LOCUS       XR_011777927             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903081), ncRNA.
ACCESSION   XR_011777927
VERSION     XR_011777927.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903081"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903081"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903081"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903081"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011777928             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903082), ncRNA.
ACCESSION   XR_011777928
VERSION     XR_011777928.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903082"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903082"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903082"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903082"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc ttgtccatgc ttcatataaa
       61 gtttcattta gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777929             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903083), ncRNA.
ACCESSION   XR_011777929
VERSION     XR_011777929.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903083"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903083"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903083"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903083"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccgtgtt gaggacatga gcttaacaaa gtagcaaaac ggtcccaagc atcaaataat
       61 gtctcactgc tcttttgtct gaattgtgaa atttctactt gaagtct
//
LOCUS       XR_011777930             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903084), ncRNA.
ACCESSION   XR_011777930
VERSION     XR_011777930.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903084"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903084"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903084"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903084"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccgtgtt gcggacatga gtgtaacaaa gtagtaaaac ggtcccaagc atcaaataat
       61 gtctcactgc tcttttgtct aaattgtgaa atttctgctt gaagtct
//
LOCUS       XR_011777931             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903085), ncRNA.
ACCESSION   XR_011777931
VERSION     XR_011777931.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903085"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903085"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903085"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903085"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacataaca atttctcctt gaagtct
//
LOCUS       XR_011777932             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903086), ncRNA.
ACCESSION   XR_011777932
VERSION     XR_011777932.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903086"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903086"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903086"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903086"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaat ttttcgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcac gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777933             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903087), ncRNA.
ACCESSION   XR_011777933
VERSION     XR_011777933.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903087"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903087"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903087"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903087"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatgtt gaggacatcc tctcaacaat ttttcgaatc ttgtctacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777934             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903088), ncRNA.
ACCESSION   XR_011777934
VERSION     XR_011777934.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903088"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903088"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903088"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903088"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccttgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaaa atttcgtctt gaagtct
//
LOCUS       XR_011777935             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903089), ncRNA.
ACCESSION   XR_011777935
VERSION     XR_011777935.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903089"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903089"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903089"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903089"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtggt gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataat
       61 gtttcattta gcttttgtac aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777936             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903091), ncRNA.
ACCESSION   XR_011777936
VERSION     XR_011777936.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903091"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903091"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903091"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903091"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccatgtg gtggacaagc tcttaacatc ttcttaaatc gtatccatgc atcatacaaa
       61 gactcatcac tccgttgagt aaatgcatta atctccatcc taagtca
//
LOCUS       XR_011777937             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903092), ncRNA.
ACCESSION   XR_011777937
VERSION     XR_011777937.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903092"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903092"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903092"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903092"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tctccaaacc ttgtccatgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777938             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903093), ncRNA.
ACCESSION   XR_011777938
VERSION     XR_011777938.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903093"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903093"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903093"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903093"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgcg gtgggcaagc tcttaacatt ttcttgaatc gtacccatgc atcatacaaa
       61 gatttatcac cccgttgggt gaacccatta atctctattc aaagtca
//
LOCUS       XR_011777939             110 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903094), ncRNA.
ACCESSION   XR_011777939
VERSION     XR_011777939.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..110
                     /gene="LOC139903094"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903094"
     ncRNA           1..110
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903094"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903094"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 atctcatggt gtgggcatgc tctaagtaac tccttcagac gctcgtacgc ttcatgaaat
       61 agttcactgg gtagttgtct aaaagatttt atttgcgtat gtctgaagtt
//
LOCUS       XR_011777940             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903095), ncRNA.
ACCESSION   XR_011777940
VERSION     XR_011777940.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903095"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903095"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903095"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903095"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttctgaatc ttgtccacgc ctcaaataac
       61 gtttcatttg gcttttgtgc gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777941             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903097), ncRNA.
ACCESSION   XR_011777941
VERSION     XR_011777941.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903097"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903097"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903097"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903097"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777942             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903098), ncRNA.
ACCESSION   XR_011777942
VERSION     XR_011777942.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903098"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903098"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903098"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903098"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777943             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903099), ncRNA.
ACCESSION   XR_011777943
VERSION     XR_011777943.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903099"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903099"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903099"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903099"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777944             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903100), ncRNA.
ACCESSION   XR_011777944
VERSION     XR_011777944.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903100"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903100"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903100"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903100"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacgatgat tcgggcatct ttgaagcaag tgtttgaatc tttcccatgc ggtgtagagt
       61 gattcattgt attcttgttg aaagtttacg atgttattcc taagtct
//
LOCUS       XR_011777945             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903101), ncRNA.
ACCESSION   XR_011777945
VERSION     XR_011777945.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903101"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903101"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903101"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903101"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtggt tcgggcatct ttgaagaaaa tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcgc atacttgttg aaagtttacg atatcatttc taagtct
//
LOCUS       XR_011777946             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903102), ncRNA.
ACCESSION   XR_011777946
VERSION     XR_011777946.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903102"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903102"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903102"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903102"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatca tctcaacaac ttttcgaatc ttgtccacgc ctcatataat
       61 atttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777947             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903103), ncRNA.
ACCESSION   XR_011777947
VERSION     XR_011777947.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903103"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903103"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903103"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903103"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tggggcattt cttcagcagg gttttgaatc gctcccatgc agtataagga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct taagtt
//
LOCUS       XR_011777948             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903104), ncRNA.
ACCESSION   XR_011777948
VERSION     XR_011777948.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903104"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903104"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903104"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903104"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatct tctcaacatc tttccaaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777949             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903105), ncRNA.
ACCESSION   XR_011777949
VERSION     XR_011777949.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903105"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903105"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903105"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903105"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaaa tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaatgtaata atttctcctt gaagtct
//
LOCUS       XR_011777950             108 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903106), ncRNA.
ACCESSION   XR_011777950
VERSION     XR_011777950.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..108
                     /gene="LOC139903106"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903106"
     ncRNA           1..108
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903106"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903106"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaatcgtgtt aaggacaagc tcgtaacaat ttctttaacc tctcccaagc atcatgaaga
       61 gattcaccac tcctttgagt aaaagaattt atctccatct ttaaacat
//
LOCUS       XR_011777951             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903107), ncRNA.
ACCESSION   XR_011777951
VERSION     XR_011777951.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903107"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903107"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903107"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903107"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttttcgaatc ttgtccacgc ttcatataat
       61 gtttcatttg gcttttgcgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777952             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903108), ncRNA.
ACCESSION   XR_011777952
VERSION     XR_011777952.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903108"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903108"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903108"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903108"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactgtgct gaggacatcc tctcaagaac tttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgagc gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011777953             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903109), ncRNA.
ACCESSION   XR_011777953
VERSION     XR_011777953.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903109"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903109"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903109"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903109"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataat ttttcaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777954             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903110), ncRNA.
ACCESSION   XR_011777954
VERSION     XR_011777954.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903110"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903110"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903110"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903110"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac ttcccaaatc ttgtccatgc ctcatataaa
       61 gtttcatttg gcttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777955             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903111), ncRNA.
ACCESSION   XR_011777955
VERSION     XR_011777955.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903111"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903111"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903111"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903111"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttctaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaaggtaata atttctcctt gaagtct
//
LOCUS       XR_011777956             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903112), ncRNA.
ACCESSION   XR_011777956
VERSION     XR_011777956.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903112"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903112"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903112"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903112"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccacgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt taagtct
//
LOCUS       XR_011777957             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903113), ncRNA.
ACCESSION   XR_011777957
VERSION     XR_011777957.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903113"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903113"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903113"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903113"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaat tttccaaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011777958             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903114), ncRNA.
ACCESSION   XR_011777958
VERSION     XR_011777958.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903114"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903114"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903114"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903114"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaat tttccaaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011777959             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903115), ncRNA.
ACCESSION   XR_011777959
VERSION     XR_011777959.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903115"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903115"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903115"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903115"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtg gtggacaagc tcttagtaac ttcttgaatc taacccatgc atcatatgaa
       61 ctctcatcac cccgttgggt gaacccatta atctccattc ttaatag
//
LOCUS       XR_011777960             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903116), ncRNA.
ACCESSION   XR_011777960
VERSION     XR_011777960.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903116"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903116"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903116"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903116"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaaaaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777961             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903117), ncRNA.
ACCESSION   XR_011777961
VERSION     XR_011777961.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903117"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903117"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903117"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903117"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttctgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgcat gaacgtgaca atttctcctt aaagtct
//
LOCUS       XR_011777962             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903118), ncRNA.
ACCESSION   XR_011777962
VERSION     XR_011777962.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903118"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903118"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903118"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903118"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtgggtaagc tcttagtagc ttcttgaatc gtacccacgc atcatacaaa
       61 ctctcatcac cccattgggt gaacccatta atctccattc taagtcg
//
LOCUS       XR_011777963             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903119), ncRNA.
ACCESSION   XR_011777963
VERSION     XR_011777963.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903119"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903119"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903119"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903119"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatggt ttggacaacc tcttagcatt ttagaaaatc gattccatgc ttcatacaag
       61 gtttccatcg gcttttgaca aaattgggaa atttcttgtt ggagtct
//
LOCUS       XR_011777964             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903120), ncRNA.
ACCESSION   XR_011777964
VERSION     XR_011777964.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903120"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903120"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903120"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903120"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactagtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat agctttgttt aaagttaatg atgtcattct taagct
//
LOCUS       XR_011777965             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903121), ncRNA.
ACCESSION   XR_011777965
VERSION     XR_011777965.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903121"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903121"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903121"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903121"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttttccacgc ctcatataat
       61 gtttcatttg gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777966             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903122), ncRNA.
ACCESSION   XR_011777966
VERSION     XR_011777966.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903122"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903122"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903122"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903122"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaat tttctgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagcct
//
LOCUS       XR_011777967             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903123), ncRNA.
ACCESSION   XR_011777967
VERSION     XR_011777967.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903123"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903123"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903123"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903123"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataga
       61 gtttcattta tcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777968             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903124), ncRNA.
ACCESSION   XR_011777968
VERSION     XR_011777968.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903124"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903124"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903124"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903124"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtggt tagggcatct tcgaagcaaa tgtttgaatc tctcccatgc agtgtagagt
       61 gattcatcgg aagcttgttg aaagtttacg atgtcattcc taagtct
//
LOCUS       XR_011777969             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903125), ncRNA.
ACCESSION   XR_011777969
VERSION     XR_011777969.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903125"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903125"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903125"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903125"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777970             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903126), ncRNA.
ACCESSION   XR_011777970
VERSION     XR_011777970.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903126"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903126"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903126"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903126"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777971             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903127), ncRNA.
ACCESSION   XR_011777971
VERSION     XR_011777971.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903127"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903127"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903127"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903127"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gttttgaaac gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011777972             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903128), ncRNA.
ACCESSION   XR_011777972
VERSION     XR_011777972.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903128"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903128"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903128"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903128"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gttttgaaac gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011777973             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903129), ncRNA.
ACCESSION   XR_011777973
VERSION     XR_011777973.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903129"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903129"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903129"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903129"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacattc tcttaataat ttaccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaaa atttctcgtt gaagtct
//
LOCUS       XR_011777974             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903130), ncRNA.
ACCESSION   XR_011777974
VERSION     XR_011777974.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903130"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903130"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903130"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903130"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttctgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777975             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903131), ncRNA.
ACCESSION   XR_011777975
VERSION     XR_011777975.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903131"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903131"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903131"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903131"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777976             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903132), ncRNA.
ACCESSION   XR_011777976
VERSION     XR_011777976.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903132"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903132"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903132"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903132"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacatc tttccgaatc ttgtccacgc ctcaaataac
       61 gtttcatttg gcttttgtgc gaacgaggca atttctcctt gaagtct
//
LOCUS       XR_011777977             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903133), ncRNA.
ACCESSION   XR_011777977
VERSION     XR_011777977.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903133"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903133"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903133"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903133"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttctaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gtttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011777978             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903134), ncRNA.
ACCESSION   XR_011777978
VERSION     XR_011777978.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903134"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903134"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903134"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903134"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg tcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777979             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903135), ncRNA.
ACCESSION   XR_011777979
VERSION     XR_011777979.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903135"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903135"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903135"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903135"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccgtgtt gaggacatcc tctcaacatc ctttcgaatc ttgtccatgc ctcatatagc
       61 gtttcatttg gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777980             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903137), ncRNA.
ACCESSION   XR_011777980
VERSION     XR_011777980.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903137"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903137"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903137"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903137"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777981             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903138), ncRNA.
ACCESSION   XR_011777981
VERSION     XR_011777981.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903138"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903138"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903138"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903138"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaatgtaata atttctcctt gaagtct
//
LOCUS       XR_011777982             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903139), ncRNA.
ACCESSION   XR_011777982
VERSION     XR_011777982.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903139"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903139"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903139"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903139"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacattc tctaaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttcacctt gaagtct
//
LOCUS       XR_011777983             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903140), ncRNA.
ACCESSION   XR_011777983
VERSION     XR_011777983.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903140"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903140"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903140"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903140"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agttgatgat tagggcattt cttcagtagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct ttagttt
//
LOCUS       XR_011777984             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903141), ncRNA.
ACCESSION   XR_011777984
VERSION     XR_011777984.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903141"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903141"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903141"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903141"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatgtt gaggacatcc tctcaacaac ttttcaaatc ttgtccacgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777985             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903142), ncRNA.
ACCESSION   XR_011777985
VERSION     XR_011777985.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903142"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903142"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903142"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903142"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacataaca atttctcctt gaagtct
//
LOCUS       XR_011777986             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903143), ncRNA.
ACCESSION   XR_011777986
VERSION     XR_011777986.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903143"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903143"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903143"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903143"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccatgc ctcatataat
       61 gtttcatttg gtttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777987             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903144), ncRNA.
ACCESSION   XR_011777987
VERSION     XR_011777987.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903144"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903144"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903144"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903144"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatggt ttggacaacc tcttagcatt ttaaaaaatc gattccatgc ttcatacaag
       61 gtttccatcg gcttttgaga aaattgggta atttcttgtt ggagtct
//
LOCUS       XR_011777988             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903145), ncRNA.
ACCESSION   XR_011777988
VERSION     XR_011777988.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903145"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903145"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903145"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903145"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacatc tttccgaatc ttgtccatgc ctcaaatatc
       61 gtttcatttg gcttttgcac gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011777989             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903146), ncRNA.
ACCESSION   XR_011777989
VERSION     XR_011777989.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903146"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903146"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903146"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903146"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttttcgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777990             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903147), ncRNA.
ACCESSION   XR_011777990
VERSION     XR_011777990.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903147"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903147"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903147"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903147"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt ctttagcagg gttttgaaac gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagctt
//
LOCUS       XR_011777991             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903148), ncRNA.
ACCESSION   XR_011777991
VERSION     XR_011777991.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903148"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903148"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903148"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903148"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgat gcggacatcc tcttaataaa tttccaaatc ttgtccatgc ctcatataga
       61 gtttcattcg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777992             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903149), ncRNA.
ACCESSION   XR_011777992
VERSION     XR_011777992.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903149"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903149"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903149"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903149"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc tagtccacgc ctcatataga
       61 gtttcattcg ttttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777993             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903150), ncRNA.
ACCESSION   XR_011777993
VERSION     XR_011777993.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903150"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903150"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903150"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903150"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttttgaatc ttgtccacac ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777994             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903151), ncRNA.
ACCESSION   XR_011777994
VERSION     XR_011777994.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903151"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903151"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903151"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903151"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttctgaatc ttgtccacgc ctcatataac
       61 atttcaattg gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777995             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903153), ncRNA.
ACCESSION   XR_011777995
VERSION     XR_011777995.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903153"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903153"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903153"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903153"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gaggacattc tctcaacaac ttttcgaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777996             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903154), ncRNA.
ACCESSION   XR_011777996
VERSION     XR_011777996.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903154"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903154"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903154"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903154"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaaac ttatccatgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777997             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903155), ncRNA.
ACCESSION   XR_011777997
VERSION     XR_011777997.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903155"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903155"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903155"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903155"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaacatt tttccgaatc ttgtccatgc ctcatatagc
       61 gtttcattta gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011777998             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903156), ncRNA.
ACCESSION   XR_011777998
VERSION     XR_011777998.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903156"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903156"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903156"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903156"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc ctttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011777999             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903157), ncRNA.
ACCESSION   XR_011777999
VERSION     XR_011777999.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903157"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903157"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903157"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903157"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc ctttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778000             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903158), ncRNA.
ACCESSION   XR_011778000
VERSION     XR_011778000.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903158"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903158"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903158"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903158"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaacaac tttccaaatc ttgtccatgc ttcatataag
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778001             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903159), ncRNA.
ACCESSION   XR_011778001
VERSION     XR_011778001.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903159"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903159"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903159"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903159"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccgtgtt ggggacaaga atgcaacaaa cggctgaagc gattccaagc atcataaaga
       61 gtttcgttag gcttttgaag aaactgagaa atttcctgtt gaagtc
//
LOCUS       XR_011778002             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903160), ncRNA.
ACCESSION   XR_011778002
VERSION     XR_011778002.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903160"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903160"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903160"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903160"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcaaatc ttgtccacgc ttcatataaa
       61 gtttcatttt ccatctgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778003             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903161), ncRNA.
ACCESSION   XR_011778003
VERSION     XR_011778003.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903161"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903161"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903161"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903161"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gaggacatcc tctcaacaac ttttcgaatc ttgtccacgc ctcatataat
       61 ttttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778004             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903162), ncRNA.
ACCESSION   XR_011778004
VERSION     XR_011778004.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903162"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903162"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903162"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903162"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctaaacaac tttccgaatc ttgtccacgc ttcatataat
       61 gtttcatttg gcttttgcgc gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778005             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903163), ncRNA.
ACCESSION   XR_011778005
VERSION     XR_011778005.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903163"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903163"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903163"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903163"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agactgtgtt gaggacatcc tctcaacatt ttttcgaatc ttgtccatgc ctcatatagc
       61 gtttcattta gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778006             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903164), ncRNA.
ACCESSION   XR_011778006
VERSION     XR_011778006.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903164"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903164"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903164"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903164"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaaa atttctcctt gaagtct
//
LOCUS       XR_011778007             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903165), ncRNA.
ACCESSION   XR_011778007
VERSION     XR_011778007.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903165"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903165"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903165"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903165"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccttgtt gaggacatcc tctcaacatc ctttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcac gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778008             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903166), ncRNA.
ACCESSION   XR_011778008
VERSION     XR_011778008.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903166"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903166"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903166"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903166"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtgat tcgggcatct tcgaagcaag tgtttgaatt tttcccatgc agtgtagagt
       61 gattcatcgt attcttgttg aaagtttacg atatcattcc ttagtct
//
LOCUS       XR_011778009             102 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903167), ncRNA.
ACCESSION   XR_011778009
VERSION     XR_011778009.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..102
                     /gene="LOC139903167"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903167"
     ncRNA           1..102
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903167"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903167"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 atgtcatggt gtgggcacgc cctaagtaat tccttgagac gatcgtacgc ttcatgaaaa
       61 agttcaccag gcaattgcct aaaagatttt atttgtgtac gc
//
LOCUS       XR_011778010             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903168), ncRNA.
ACCESSION   XR_011778010
VERSION     XR_011778010.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903168"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903168"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903168"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903168"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataac
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778011             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903169), ncRNA.
ACCESSION   XR_011778011
VERSION     XR_011778011.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903169"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903169"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903169"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903169"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctaaacaac ttttcgaatc ttgtccattc ctcatataat
       61 gtttcatttg gtttttgcgc taacgtaaca atttcacctt gaagtct
//
LOCUS       XR_011778012             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903170), ncRNA.
ACCESSION   XR_011778012
VERSION     XR_011778012.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903170"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903170"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903170"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903170"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatggt ttggacaaca tcttagcatt ttggaaaatc gattccatgc ttcatacaag
       61 gtttccatca gcttttgaca aaattgggta atttcttgtt ggagtct
//
LOCUS       XR_011778013             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903171), ncRNA.
ACCESSION   XR_011778013
VERSION     XR_011778013.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903171"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903171"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903171"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903171"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagtagg attttgaatc gctcccatgc agtgtaaagt
       61 gattcatcat aactttgttt gaagttaatg atgtaattct taagct
//
LOCUS       XR_011778014             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903172), ncRNA.
ACCESSION   XR_011778014
VERSION     XR_011778014.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903172"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903172"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903172"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903172"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccatgtg atggacaagc tcttagcatc ttcttgaaac gtatccatgc atcatacaaa
       61 gactcatcac tctgttgagc gaatgcctta atctccatcc taagtcg
//
LOCUS       XR_011778015             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903173), ncRNA.
ACCESSION   XR_011778015
VERSION     XR_011778015.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903173"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903173"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903173"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903173"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gcggacatcc tttcaacaac tttccaaatc ttgtccatgc ttcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778016             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903174), ncRNA.
ACCESSION   XR_011778016
VERSION     XR_011778016.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903174"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903174"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903174"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903174"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gtttttgcac gaacgtggca atttctactt gaagtct
//
LOCUS       XR_011778017             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903175), ncRNA.
ACCESSION   XR_011778017
VERSION     XR_011778017.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903175"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903175"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903175"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903175"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778018             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903176), ncRNA.
ACCESSION   XR_011778018
VERSION     XR_011778018.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903176"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903176"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903176"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903176"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactgtgct gaggacatcc tctcaacaac ttcccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778019             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903177), ncRNA.
ACCESSION   XR_011778019
VERSION     XR_011778019.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903177"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903177"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903177"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903177"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgcccaagc ctcatataga
       61 gtttcatttg gcttctgttt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778020             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903178), ncRNA.
ACCESSION   XR_011778020
VERSION     XR_011778020.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903178"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903178"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903178"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903178"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778021             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903179), ncRNA.
ACCESSION   XR_011778021
VERSION     XR_011778021.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903179"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903179"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903179"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903179"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatt tttccgaatc ttgtccatgc ctcaaataat
       61 gtttcatttg gcttttgtgc gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778022             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903180), ncRNA.
ACCESSION   XR_011778022
VERSION     XR_011778022.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903180"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903180"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903180"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903180"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg acttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778023             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903181), ncRNA.
ACCESSION   XR_011778023
VERSION     XR_011778023.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903181"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903181"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903181"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903181"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatgtt gaggacatcc tctcaataac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778024             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903182), ncRNA.
ACCESSION   XR_011778024
VERSION     XR_011778024.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903182"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903182"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903182"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903182"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac ttttcaaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778025             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903184), ncRNA.
ACCESSION   XR_011778025
VERSION     XR_011778025.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903184"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903184"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903184"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903184"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778026             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903185), ncRNA.
ACCESSION   XR_011778026
VERSION     XR_011778026.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903185"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903185"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903185"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903185"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaaa ttttcgaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgcgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778027             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903186), ncRNA.
ACCESSION   XR_011778027
VERSION     XR_011778027.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903186"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903186"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903186"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903186"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtggacatcc tctcaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg tcttttgtgt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778028             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903187), ncRNA.
ACCESSION   XR_011778028
VERSION     XR_011778028.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903187"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903187"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903187"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903187"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtggt tcgggcatct tcaaagcaaa tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcat aggcttgttg aaagtttatg atatcattcc taagtct
//
LOCUS       XR_011778029             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903188), ncRNA.
ACCESSION   XR_011778029
VERSION     XR_011778029.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903188"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903188"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903188"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903188"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaaaaac ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778030             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903189), ncRNA.
ACCESSION   XR_011778030
VERSION     XR_011778030.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903189"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903189"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903189"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903189"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgttt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778031             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903190), ncRNA.
ACCESSION   XR_011778031
VERSION     XR_011778031.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903190"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903190"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903190"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903190"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatatagc
       61 gtttcatttg gcttttgcat gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778032             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903191), ncRNA.
ACCESSION   XR_011778032
VERSION     XR_011778032.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903191"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903191"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903191"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903191"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc tagtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacataaca atttcttctt gaagtct
//
LOCUS       XR_011778033             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903192), ncRNA.
ACCESSION   XR_011778033
VERSION     XR_011778033.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903192"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903192"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903192"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903192"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 gtttcattta gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778034             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903193), ncRNA.
ACCESSION   XR_011778034
VERSION     XR_011778034.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903193"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903193"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903193"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903193"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aattttgttt gaagttaatg atgtcattct ttagttt
//
LOCUS       XR_011778035             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903194), ncRNA.
ACCESSION   XR_011778035
VERSION     XR_011778035.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903194"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903194"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903194"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903194"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatt cttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc aaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778036             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903195), ncRNA.
ACCESSION   XR_011778036
VERSION     XR_011778036.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903195"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903195"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903195"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903195"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataaa ttttcgaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaatgtaaca attgctcctt gaagtct
//
LOCUS       XR_011778037             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903196), ncRNA.
ACCESSION   XR_011778037
VERSION     XR_011778037.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903196"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903196"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903196"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903196"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778038             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903197), ncRNA.
ACCESSION   XR_011778038
VERSION     XR_011778038.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903197"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903197"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903197"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903197"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778039             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903198), ncRNA.
ACCESSION   XR_011778039
VERSION     XR_011778039.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903198"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903198"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903198"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903198"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778040             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903200), ncRNA.
ACCESSION   XR_011778040
VERSION     XR_011778040.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903200"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903200"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903200"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903200"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac ttttcgaatc ttgtcaacgc ttcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778041             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903201), ncRNA.
ACCESSION   XR_011778041
VERSION     XR_011778041.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903201"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903201"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903201"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903201"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttctaaatc gtgtccacgc ttcatataga
       61 gtttcattta gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778042             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903202), ncRNA.
ACCESSION   XR_011778042
VERSION     XR_011778042.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903202"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903202"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903202"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903202"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccttgtt gaggacatcc tctccacatt tttccgaatc ttgtccatgc ctcatatagc
       61 gtttcatttg gcttttgtgc gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778043             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903203), ncRNA.
ACCESSION   XR_011778043
VERSION     XR_011778043.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903203"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903203"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903203"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903203"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgcccacgc ctcaaataat
       61 gtttcatttg gcttttgtgc gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778044             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903204), ncRNA.
ACCESSION   XR_011778044
VERSION     XR_011778044.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903204"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903204"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903204"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903204"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778045             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903205), ncRNA.
ACCESSION   XR_011778045
VERSION     XR_011778045.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903205"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903205"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903205"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903205"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tttcaataac ttttcaaatc ttgtccatgc ctcatatagt
       61 gtttcatttg gcttttgcgt gaacgtaact atatctcctc gaagtct
//
LOCUS       XR_011778046             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903206), ncRNA.
ACCESSION   XR_011778046
VERSION     XR_011778046.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903206"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903206"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903206"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903206"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccgtgtt gaggacatcc tctcaacatt tttccgaatc ttgtccatgc ctcatataac
       61 gtttcattcg gcttttgtgc gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778047             108 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903207), ncRNA.
ACCESSION   XR_011778047
VERSION     XR_011778047.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..108
                     /gene="LOC139903207"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903207"
     ncRNA           1..108
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903207"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903207"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccatgtg gtgggcaagc tattaataac ttcttgaaac gcacccatgc atcatacaaa
       61 gactcatctc tcctttgcgt gaacccatta atttccattc ttaaacgt
//
LOCUS       XR_011778048             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903208), ncRNA.
ACCESSION   XR_011778048
VERSION     XR_011778048.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903208"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903208"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903208"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903208"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcaatagg gttttcaatc gctcccatcc agtgtaaaga
       61 gattcatcat aattttgttt aaagttaatg atgtcattct taagtt
//
LOCUS       XR_011778049             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903209), ncRNA.
ACCESSION   XR_011778049
VERSION     XR_011778049.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903209"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903209"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903209"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903209"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778050             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903210), ncRNA.
ACCESSION   XR_011778050
VERSION     XR_011778050.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903210"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903210"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903210"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903210"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778051             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903211), ncRNA.
ACCESSION   XR_011778051
VERSION     XR_011778051.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903211"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903211"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903211"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903211"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 atttcatttg gcttttacac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778052             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903213), ncRNA.
ACCESSION   XR_011778052
VERSION     XR_011778052.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903213"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903213"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903213"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903213"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccatgc ttcaaataaa
       61 gtttcatttg gcttttgtgc gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778053             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903214), ncRNA.
ACCESSION   XR_011778053
VERSION     XR_011778053.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903214"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903214"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903214"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903214"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gagaacatcc tctcaataat tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaatgtaaca attttttctt gaagtct
//
LOCUS       XR_011778054             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903216), ncRNA.
ACCESSION   XR_011778054
VERSION     XR_011778054.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903216"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903216"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903216"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903216"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccgaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgcgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778055             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903217), ncRNA.
ACCESSION   XR_011778055
VERSION     XR_011778055.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903217"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903217"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903217"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903217"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtggt tcgggcatct ttgaagcaaa tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcgt atgcttgttg aaagtttatg atatcattcc taagtct
//
LOCUS       XR_011778056             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903218), ncRNA.
ACCESSION   XR_011778056
VERSION     XR_011778056.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903218"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903218"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903218"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903218"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtggacatcc tcttaataac tttccaaatc ttttccacgc ctcatataga
       61 gtttcatttg gtttttgtgt gaacataaca atttctcctt gaagtct
//
LOCUS       XR_011778057             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903219), ncRNA.
ACCESSION   XR_011778057
VERSION     XR_011778057.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903219"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903219"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903219"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903219"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactgtgct gaggacatcc tctcaacaac ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778058             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903220), ncRNA.
ACCESSION   XR_011778058
VERSION     XR_011778058.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903220"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903220"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903220"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903220"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatatagc
       61 gtttcatttg gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778059             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903221), ncRNA.
ACCESSION   XR_011778059
VERSION     XR_011778059.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903221"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903221"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903221"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903221"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttctgaatc ttgtccatgc ctcatataat
       61 gtttcattta gcttttgcgc gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778060             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903223), ncRNA.
ACCESSION   XR_011778060
VERSION     XR_011778060.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903223"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903223"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903223"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903223"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac ttttcgaatc ttttccacgc ctcatataga
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778061             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903224), ncRNA.
ACCESSION   XR_011778061
VERSION     XR_011778061.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903224"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903224"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903224"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903224"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatgtt gaggacatcc tctcaacatt tttccgaatc ttgtccaccc ctcaaataac
       61 gtttcatttg gcttttgtgt aaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778062             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903225), ncRNA.
ACCESSION   XR_011778062
VERSION     XR_011778062.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903225"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903225"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903225"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903225"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataat tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gtttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778063             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903227), ncRNA.
ACCESSION   XR_011778063
VERSION     XR_011778063.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903227"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903227"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903227"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903227"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778064             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903228), ncRNA.
ACCESSION   XR_011778064
VERSION     XR_011778064.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903228"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903228"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903228"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903228"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ttcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778065             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903229), ncRNA.
ACCESSION   XR_011778065
VERSION     XR_011778065.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903229"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903229"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903229"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903229"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttctaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778066             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903230), ncRNA.
ACCESSION   XR_011778066
VERSION     XR_011778066.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903230"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903230"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903230"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903230"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttcccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778067             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903231), ncRNA.
ACCESSION   XR_011778067
VERSION     XR_011778067.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903231"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903231"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903231"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903231"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gtttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778068             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903233), ncRNA.
ACCESSION   XR_011778068
VERSION     XR_011778068.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903233"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903233"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903233"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903233"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778069             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903234), ncRNA.
ACCESSION   XR_011778069
VERSION     XR_011778069.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903234"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903234"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903234"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903234"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataat tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778070             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903235), ncRNA.
ACCESSION   XR_011778070
VERSION     XR_011778070.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903235"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903235"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903235"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903235"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttttccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778071             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903236), ncRNA.
ACCESSION   XR_011778071
VERSION     XR_011778071.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903236"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903236"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903236"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903236"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccatgc ctcaaataat
       61 gtttcatttg gcttttgtgc gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778072             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903237), ncRNA.
ACCESSION   XR_011778072
VERSION     XR_011778072.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903237"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903237"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903237"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903237"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778073             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903238), ncRNA.
ACCESSION   XR_011778073
VERSION     XR_011778073.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903238"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903238"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903238"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903238"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgttcatgc ttcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778074             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903239), ncRNA.
ACCESSION   XR_011778074
VERSION     XR_011778074.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903239"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903239"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903239"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903239"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttacgc gaacgtaaca atttttcctt gaagtct
//
LOCUS       XR_011778075             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903240), ncRNA.
ACCESSION   XR_011778075
VERSION     XR_011778075.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903240"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903240"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903240"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903240"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatgtt gaggacatcc tctcaacaat tttccaaatc ttgtccatgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778076             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903241), ncRNA.
ACCESSION   XR_011778076
VERSION     XR_011778076.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903241"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903241"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903241"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903241"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttcccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778077             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903242), ncRNA.
ACCESSION   XR_011778077
VERSION     XR_011778077.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903242"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903242"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903242"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903242"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778078             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903243), ncRNA.
ACCESSION   XR_011778078
VERSION     XR_011778078.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903243"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903243"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903243"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903243"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778079             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903244), ncRNA.
ACCESSION   XR_011778079
VERSION     XR_011778079.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903244"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903244"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903244"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903244"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctagtgat tagggcattt ctttagcaga gttttgaatc gctcccatgc agtgcaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct ttagttt
//
LOCUS       XR_011778080             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903245), ncRNA.
ACCESSION   XR_011778080
VERSION     XR_011778080.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903245"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903245"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903245"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903245"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcagcatc ctttcgaatc ttgtccatgc cccatataac
       61 gtttcatttg gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778081             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903246), ncRNA.
ACCESSION   XR_011778081
VERSION     XR_011778081.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903246"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903246"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903246"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903246"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaat tttctgaatc ttgttcacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778082             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903247), ncRNA.
ACCESSION   XR_011778082
VERSION     XR_011778082.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903247"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903247"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903247"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903247"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatct tctcaacaat tttccgaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778083             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903248), ncRNA.
ACCESSION   XR_011778083
VERSION     XR_011778083.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903248"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903248"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903248"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903248"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttttccacgc ctcatataga
       61 gtttcatttg gctattgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778084             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903249), ncRNA.
ACCESSION   XR_011778084
VERSION     XR_011778084.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903249"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903249"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903249"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903249"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactgatgat tagggcgttt cttcagcagg gttttgaatc gctcccatgc agtataaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct tgagtt
//
LOCUS       XR_011778085             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903250), ncRNA.
ACCESSION   XR_011778085
VERSION     XR_011778085.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903250"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903250"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903250"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903250"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tttcaacaac tttccaaatc ttgtcaatgc ttcatataag
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778086             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903251), ncRNA.
ACCESSION   XR_011778086
VERSION     XR_011778086.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903251"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903251"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903251"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903251"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccatggt ttggacaacc tcttagcatt ttggaaaacc gattccatgc ttcatataag
       61 gtttccatcg gcttttgaca gaattgggaa atttcttgtt ggagtct
//
LOCUS       XR_011778087             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903252), ncRNA.
ACCESSION   XR_011778087
VERSION     XR_011778087.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903252"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903252"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903252"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903252"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatgtt aaggacatcc tctcaacaac tttccgaatc ttgtccacgc ttcatataat
       61 gtttcatttg gcttttgtgt gaaggtaaca atttctcctt gaagtct
//
LOCUS       XR_011778088             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903253), ncRNA.
ACCESSION   XR_011778088
VERSION     XR_011778088.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903253"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903253"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903253"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903253"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaat tttccgaatc ttgtccacgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778089             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903254), ncRNA.
ACCESSION   XR_011778089
VERSION     XR_011778089.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903254"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903254"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903254"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903254"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataac ttttcaaata ttgtccacgc ttcatataaa
       61 gtttcatttg gcttctgagt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778090             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903255), ncRNA.
ACCESSION   XR_011778090
VERSION     XR_011778090.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903255"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903255"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903255"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903255"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ttcatataat
       61 atttcatttg gcttcggtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778091             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903257), ncRNA.
ACCESSION   XR_011778091
VERSION     XR_011778091.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903257"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903257"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903257"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903257"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc tagtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778092             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903258), ncRNA.
ACCESSION   XR_011778092
VERSION     XR_011778092.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903258"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903258"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903258"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903258"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttttccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778093             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903259), ncRNA.
ACCESSION   XR_011778093
VERSION     XR_011778093.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903259"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903259"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903259"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903259"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ttcatataat
       61 gtttcatttg gcttttgtgc taacgtaaca atctctcctt gaagtct
//
LOCUS       XR_011778094             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903260), ncRNA.
ACCESSION   XR_011778094
VERSION     XR_011778094.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903260"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903260"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903260"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903260"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccgtgtt gaggacaacc tcttaacatt tttccgaatc ttgtccatgc ctcatatagc
       61 gtttcatttg gcttttgtgc caacgtggaa atttctactt aaagtct
//
LOCUS       XR_011778095             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903261), ncRNA.
ACCESSION   XR_011778095
VERSION     XR_011778095.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903261"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903261"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903261"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903261"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaacaac tttccaaatc ttttccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778096             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903262), ncRNA.
ACCESSION   XR_011778096
VERSION     XR_011778096.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903262"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903262"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903262"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903262"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct taagat
//
LOCUS       XR_011778097             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903265), ncRNA.
ACCESSION   XR_011778097
VERSION     XR_011778097.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903265"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903265"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903265"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903265"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgat gaggacatcc tctcaacaac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg acttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778098             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903266), ncRNA.
ACCESSION   XR_011778098
VERSION     XR_011778098.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903266"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903266"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903266"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903266"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccatgtt gcggacatga gcgtaagaaa gtagcaaaac ggtcccaagc atcaaacaat
       61 gtctcactgc tcttttgtct gaattgagaa atttctgctt gaagtct
//
LOCUS       XR_011778099             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903267), ncRNA.
ACCESSION   XR_011778099
VERSION     XR_011778099.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903267"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903267"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903267"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903267"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccatgc ctcaaataaa
       61 gtttcatttg gcttttgtgc aaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778100             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903268), ncRNA.
ACCESSION   XR_011778100
VERSION     XR_011778100.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903268"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903268"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903268"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903268"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg ccttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778101             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903269), ncRNA.
ACCESSION   XR_011778101
VERSION     XR_011778101.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903269"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903269"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903269"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903269"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctagtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc ggtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct taagct
//
LOCUS       XR_011778102             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903271), ncRNA.
ACCESSION   XR_011778102
VERSION     XR_011778102.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903271"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903271"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903271"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903271"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttctgttt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778103             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903272), ncRNA.
ACCESSION   XR_011778103
VERSION     XR_011778103.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903272"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903272"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903272"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903272"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778104             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903273), ncRNA.
ACCESSION   XR_011778104
VERSION     XR_011778104.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903273"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903273"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903273"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903273"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataaa tttccaaatc ttgtccatgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778105             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903274), ncRNA.
ACCESSION   XR_011778105
VERSION     XR_011778105.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903274"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903274"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903274"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903274"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgcgt gaacttaaca atttcacctt gaagtct
//
LOCUS       XR_011778106             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903275), ncRNA.
ACCESSION   XR_011778106
VERSION     XR_011778106.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903275"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903275"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903275"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903275"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactatgct gaggacatcc tctcaacaac ttccctaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778107             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903276), ncRNA.
ACCESSION   XR_011778107
VERSION     XR_011778107.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903276"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903276"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903276"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903276"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778108             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903277), ncRNA.
ACCESSION   XR_011778108
VERSION     XR_011778108.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903277"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903277"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903277"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903277"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gttttgaaac gctcccatgc agtgtaaaga
       61 gtttcatgat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778109             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903278), ncRNA.
ACCESSION   XR_011778109
VERSION     XR_011778109.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903278"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903278"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903278"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903278"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgcgt aaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778110             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903279), ncRNA.
ACCESSION   XR_011778110
VERSION     XR_011778110.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903279"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903279"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903279"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903279"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtggacatcc tcttaacaac tttccaaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaatgtaact atttctcctt gaagtct
//
LOCUS       XR_011778111             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903280), ncRNA.
ACCESSION   XR_011778111
VERSION     XR_011778111.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903280"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903280"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903280"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903280"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccacgc ttcatataga
       61 gtttcatttg gcttctgtgt gaaagtaaca atttctcctt gaagtct
//
LOCUS       XR_011778112             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903281), ncRNA.
ACCESSION   XR_011778112
VERSION     XR_011778112.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903281"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903281"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903281"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903281"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttccaaatc ttttccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778113             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903282), ncRNA.
ACCESSION   XR_011778113
VERSION     XR_011778113.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903282"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903282"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903282"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903282"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778114             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903283), ncRNA.
ACCESSION   XR_011778114
VERSION     XR_011778114.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903283"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903283"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903283"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903283"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 gaaccgtgcg gtgggcaagc tcttaacatt ttcttgaatc gtacccacac atcatataaa
       61 gattcatcac cctattgggt gaacccatta acctccattc gaagtcg
//
LOCUS       XR_011778115             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903284), ncRNA.
ACCESSION   XR_011778115
VERSION     XR_011778115.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903284"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903284"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903284"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903284"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactgtgct gaggacatcc tctcaacaac tatctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca attttttctt gaagtct
//
LOCUS       XR_011778116             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903285), ncRNA.
ACCESSION   XR_011778116
VERSION     XR_011778116.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903285"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903285"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903285"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903285"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggatatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcattcg gtttttgtgt aaacgtaaca atttctcctt taagtct
//
LOCUS       XR_011778117             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903286), ncRNA.
ACCESSION   XR_011778117
VERSION     XR_011778117.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903286"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903286"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903286"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903286"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 ttaccatgtt gaggacatcc tctcaacaac ttttcaaatc ttgtccacgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaaa atttctcctt gaagtca
//
LOCUS       XR_011778118             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903287), ncRNA.
ACCESSION   XR_011778118
VERSION     XR_011778118.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903287"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903287"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903287"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903287"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttcccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778119             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903288), ncRNA.
ACCESSION   XR_011778119
VERSION     XR_011778119.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903288"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903288"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903288"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903288"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatatt gaggacatcc tctcaacaac tttccaaatc tttttcatgc ttcatataga
       61 gtttcatttg gcttttgcgt gaaagtaaca atttctcctt gaagtct
//
LOCUS       XR_011778120             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903289), ncRNA.
ACCESSION   XR_011778120
VERSION     XR_011778120.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903289"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903289"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903289"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903289"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778121             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903291), ncRNA.
ACCESSION   XR_011778121
VERSION     XR_011778121.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903291"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903291"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903291"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903291"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcactt cttcagcaag gttttgaaac gctcacatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778122             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903292), ncRNA.
ACCESSION   XR_011778122
VERSION     XR_011778122.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903292"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903292"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903292"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903292"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccttgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 atttcatttg gcttttgcac gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778123             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903293), ncRNA.
ACCESSION   XR_011778123
VERSION     XR_011778123.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903293"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903293"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903293"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903293"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtggacaagc tcttagcatt ttcttgaatc ttatccatgc atcatacaag
       61 gactcatcat tccattgagt gaatccatta atctccattc taaggcg
//
LOCUS       XR_011778124             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903295), ncRNA.
ACCESSION   XR_011778124
VERSION     XR_011778124.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903295"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903295"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903295"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903295"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccatgtg gtggacaagc tcgtaacatc ttcttaaaac gtatccatgc atcatacaaa
       61 ggctcatcac tccgttgagc aaatgcattg atctccatcc taagttg
//
LOCUS       XR_011778125             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903296), ncRNA.
ACCESSION   XR_011778125
VERSION     XR_011778125.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903296"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903296"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903296"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903296"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcgaatc ttgtccatgt ttcatataga
       61 gtttcatttg gcttctgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778126             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903297), ncRNA.
ACCESSION   XR_011778126
VERSION     XR_011778126.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903297"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903297"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903297"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903297"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttatccacgc ctcatataac
       61 gtttcatttg gcttttgcat gaacgtggca atttcccctt gaagtct
//
LOCUS       XR_011778127             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903298), ncRNA.
ACCESSION   XR_011778127
VERSION     XR_011778127.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903298"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903298"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903298"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903298"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtggacatcc tcttagaatt tttccgaatc ttgtccacgc ctcaaataac
       61 gtttcatttg gcttttgcac aaacgtggca atttctactt gaagtct
//
LOCUS       XR_011778128             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903299), ncRNA.
ACCESSION   XR_011778128
VERSION     XR_011778128.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903299"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903299"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903299"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903299"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttttaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gtttctgcgt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778129             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903300), ncRNA.
ACCESSION   XR_011778129
VERSION     XR_011778129.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903300"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903300"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903300"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903300"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccgtgtt gaggacatcc tctcaacaac tttccaaatc ttttccatgc ctcatataga
       61 gtttcatttg gcttctgcgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778130             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903301), ncRNA.
ACCESSION   XR_011778130
VERSION     XR_011778130.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903301"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903301"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903301"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903301"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agttggtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778131             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903302), ncRNA.
ACCESSION   XR_011778131
VERSION     XR_011778131.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903302"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903302"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903302"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903302"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac ttcccgaatc ttatccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778132             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903303), ncRNA.
ACCESSION   XR_011778132
VERSION     XR_011778132.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903303"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903303"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903303"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903303"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactgtgtt gaggacatcc tctcaacatt cttccgaatc ttgtccatgc ttcatataat
       61 gtttcatttg gcttttgcat gaacgtgaca atttctcctt gaagtct
//
LOCUS       XR_011778133             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903304), ncRNA.
ACCESSION   XR_011778133
VERSION     XR_011778133.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903304"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903304"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903304"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903304"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg ccttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778134             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903305), ncRNA.
ACCESSION   XR_011778134
VERSION     XR_011778134.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903305"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903305"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903305"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903305"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agatggtgat tagggcattt ctttagcagg gttttgaatc actcccatgc agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct ttagttt
//
LOCUS       XR_011778135             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903306), ncRNA.
ACCESSION   XR_011778135
VERSION     XR_011778135.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903306"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903306"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903306"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903306"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataga
       61 gtttcacttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778136             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903307), ncRNA.
ACCESSION   XR_011778136
VERSION     XR_011778136.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903307"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903307"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903307"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903307"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaat tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778137             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903308), ncRNA.
ACCESSION   XR_011778137
VERSION     XR_011778137.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903308"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903308"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903308"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903308"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaaaaat tttccgaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778138             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903309), ncRNA.
ACCESSION   XR_011778138
VERSION     XR_011778138.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903309"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903309"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903309"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903309"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtggacaagc tcttagcatt ttcttgaatc atatccatgc atcatacaag
       61 gactcatcat tcctttgagt gaatccatta atctccattc taaggcg
//
LOCUS       XR_011778139             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903311), ncRNA.
ACCESSION   XR_011778139
VERSION     XR_011778139.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903311"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903311"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903311"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903311"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778140             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903312), ncRNA.
ACCESSION   XR_011778140
VERSION     XR_011778140.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903312"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903312"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903312"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903312"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcagg gttttgaaac gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagctt
//
LOCUS       XR_011778141             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903314), ncRNA.
ACCESSION   XR_011778141
VERSION     XR_011778141.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903314"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903314"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903314"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903314"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttctgaatc ttgtccacgc ctcaaataac
       61 gtttcattta gcttttgagc gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778142             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903315), ncRNA.
ACCESSION   XR_011778142
VERSION     XR_011778142.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903315"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903315"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903315"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903315"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt taagtct
//
LOCUS       XR_011778143             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903316), ncRNA.
ACCESSION   XR_011778143
VERSION     XR_011778143.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903316"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903316"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903316"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903316"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcaccagg gttttgaatc actcccatgc agtataaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778144             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903317), ncRNA.
ACCESSION   XR_011778144
VERSION     XR_011778144.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903317"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903317"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903317"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903317"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaat ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778145             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903318), ncRNA.
ACCESSION   XR_011778145
VERSION     XR_011778145.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903318"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903318"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903318"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903318"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778146             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903319), ncRNA.
ACCESSION   XR_011778146
VERSION     XR_011778146.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903319"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903319"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903319"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903319"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778147             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903320), ncRNA.
ACCESSION   XR_011778147
VERSION     XR_011778147.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903320"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903320"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903320"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903320"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacattc tctcaacaac tttcggaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttcacctt gaagtct
//
LOCUS       XR_011778148             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903321), ncRNA.
ACCESSION   XR_011778148
VERSION     XR_011778148.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903321"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903321"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903321"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903321"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gtttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778149             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903322), ncRNA.
ACCESSION   XR_011778149
VERSION     XR_011778149.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903322"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903322"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903322"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903322"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaatgac ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778150             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903323), ncRNA.
ACCESSION   XR_011778150
VERSION     XR_011778150.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903323"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903323"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903323"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903323"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778151             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903324), ncRNA.
ACCESSION   XR_011778151
VERSION     XR_011778151.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903324"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903324"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903324"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903324"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactgtgtg gtgggaaagc tcttagcatc ttcttgaaac gtgcccacac atcatacaaa
       61 gactcatcat ctcgttgggt gaatccattg atttccattc taagtcg
//
LOCUS       XR_011778152             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903325), ncRNA.
ACCESSION   XR_011778152
VERSION     XR_011778152.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903325"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903325"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903325"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903325"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcaga gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagctt
//
LOCUS       XR_011778153             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903327), ncRNA.
ACCESSION   XR_011778153
VERSION     XR_011778153.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903327"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903327"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903327"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903327"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccttgtt gaggacatcc tctcaacaat tttctaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgcgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778154             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903328), ncRNA.
ACCESSION   XR_011778154
VERSION     XR_011778154.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903328"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903328"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903328"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903328"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcaag gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tgagtt
//
LOCUS       XR_011778155             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903329), ncRNA.
ACCESSION   XR_011778155
VERSION     XR_011778155.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903329"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903329"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903329"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903329"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccgtgtt gaggacatcc tctcaacatt tttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgtgc gaacgtggca atttctccat gaagtct
//
LOCUS       XR_011778156             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903330), ncRNA.
ACCESSION   XR_011778156
VERSION     XR_011778156.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903330"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903330"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903330"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903330"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataat tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778157             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903331), ncRNA.
ACCESSION   XR_011778157
VERSION     XR_011778157.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903331"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903331"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903331"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903331"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gaggacatcc tctcaacaac tttccgaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778158             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903332), ncRNA.
ACCESSION   XR_011778158
VERSION     XR_011778158.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903332"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903332"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903332"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903332"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaat ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gctttttcgc gaacgtaaaa atttctcctt gaagtct
//
LOCUS       XR_011778159             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903333), ncRNA.
ACCESSION   XR_011778159
VERSION     XR_011778159.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903333"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903333"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903333"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903333"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttttccactc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778160             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903334), ncRNA.
ACCESSION   XR_011778160
VERSION     XR_011778160.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903334"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903334"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903334"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903334"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttttccactc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778161             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903335), ncRNA.
ACCESSION   XR_011778161
VERSION     XR_011778161.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903335"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903335"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903335"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903335"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg acttttgcat gaacgcaaca atttctcctt gaagtct
//
LOCUS       XR_011778162             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903336), ncRNA.
ACCESSION   XR_011778162
VERSION     XR_011778162.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903336"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903336"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903336"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903336"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaataac ttaccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778163             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903337), ncRNA.
ACCESSION   XR_011778163
VERSION     XR_011778163.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903337"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903337"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903337"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903337"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccgtgtt gcggacacga gcgtaacaaa gtagcaaaac ggtcccaagc atcaaataat
       61 gtctcactac tcttttgtct aaattgtgaa atttctgctt gaagtct
//
LOCUS       XR_011778164             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903338), ncRNA.
ACCESSION   XR_011778164
VERSION     XR_011778164.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903338"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903338"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903338"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903338"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaatcttgct gaggacatcc tctcaacaac ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778165             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903339), ncRNA.
ACCESSION   XR_011778165
VERSION     XR_011778165.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903339"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903339"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903339"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903339"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggtattt cttcagcaag tttttgaatc gctccgatgc agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct taagct
//
LOCUS       XR_011778166             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903340), ncRNA.
ACCESSION   XR_011778166
VERSION     XR_011778166.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903340"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903340"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903340"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903340"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttttcgaatc ttgaccacgc ctcatataat
       61 gtttcattta gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778167             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903341), ncRNA.
ACCESSION   XR_011778167
VERSION     XR_011778167.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903341"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903341"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903341"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903341"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtcaatgc ctcatataac
       61 gtttcatttg gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778168             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903343), ncRNA.
ACCESSION   XR_011778168
VERSION     XR_011778168.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903343"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903343"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903343"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903343"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcaaatc ttgtccaagc ctcatataga
       61 gtttcatttg gcttctgtat gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778169             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903344), ncRNA.
ACCESSION   XR_011778169
VERSION     XR_011778169.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903344"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903344"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903344"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903344"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgcg gtgggcaagc tcataacatt ttcttgaatc gtacccacgc atcatacaaa
       61 gactcatcac cccgttgggt gaacccatta atctctattc gaagtcg
//
LOCUS       XR_011778170             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903345), ncRNA.
ACCESSION   XR_011778170
VERSION     XR_011778170.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903345"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903345"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903345"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903345"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactagtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct ttagctt
//
LOCUS       XR_011778171             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903346), ncRNA.
ACCESSION   XR_011778171
VERSION     XR_011778171.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903346"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903346"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903346"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903346"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778172             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903347), ncRNA.
ACCESSION   XR_011778172
VERSION     XR_011778172.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903347"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903347"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903347"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903347"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatggt ttggacaacc tcttagcatt ttagaaaatc gattccatgc ttcatacaag
       61 gtttccatcg gcttttgaca aaattgggta atttcttgtt ggagtct
//
LOCUS       XR_011778173             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903348), ncRNA.
ACCESSION   XR_011778173
VERSION     XR_011778173.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903348"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903348"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903348"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903348"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccaagc ctcatataga
       61 gtttcatttg gcttctgcgt gaacgtagca atttctcctt gaagtct
//
LOCUS       XR_011778174             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903349), ncRNA.
ACCESSION   XR_011778174
VERSION     XR_011778174.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903349"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903349"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903349"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903349"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtg gtgggcaagc tcttagcatc ttcttgaaat gtacccacgc atcatacaaa
       61 gattcatcac cccgttgggt gaatccattg atttccattc gaagtcg
//
LOCUS       XR_011778175             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903350), ncRNA.
ACCESSION   XR_011778175
VERSION     XR_011778175.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903350"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903350"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903350"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903350"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttctgtgt gaacgcaaca atttctcctt gaagtct
//
LOCUS       XR_011778176             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903351), ncRNA.
ACCESSION   XR_011778176
VERSION     XR_011778176.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903351"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903351"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903351"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903351"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778177             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903352), ncRNA.
ACCESSION   XR_011778177
VERSION     XR_011778177.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903352"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903352"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903352"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903352"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccacgc ctcaaataac
       61 gtttcatttg gattttgtgc gaacgtggca atttctcctt aaagtct
//
LOCUS       XR_011778178             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903353), ncRNA.
ACCESSION   XR_011778178
VERSION     XR_011778178.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903353"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903353"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903353"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903353"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccacgc ctcaaataac
       61 gtttcatttg gattttgtgc gaacgtggca atttctcctt aaagtct
//
LOCUS       XR_011778179             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903354), ncRNA.
ACCESSION   XR_011778179
VERSION     XR_011778179.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903354"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903354"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903354"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903354"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacattc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778180             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903355), ncRNA.
ACCESSION   XR_011778180
VERSION     XR_011778180.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903355"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903355"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903355"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903355"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctgaataac tttccaaaac ttgtccatgc ctcatataga
       61 gtttcatttg atttctgtgt gaacgtaaca atttctcctt aaagtct
//
LOCUS       XR_011778181             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903356), ncRNA.
ACCESSION   XR_011778181
VERSION     XR_011778181.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903356"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903356"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903356"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903356"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc ttgtccatgc ctcatataaa
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778182             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903357), ncRNA.
ACCESSION   XR_011778182
VERSION     XR_011778182.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903357"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903357"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903357"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903357"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccttgtt gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttatgttc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778183             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903358), ncRNA.
ACCESSION   XR_011778183
VERSION     XR_011778183.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903358"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903358"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903358"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903358"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacagtggc ttgggcatca ttgaagcaaa aatttgaatc tatcccatgc attgtagagt
       61 gattcatcgt atgcgtgttg aaagtttacg atatcattcc taagtct
//
LOCUS       XR_011778184             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903359), ncRNA.
ACCESSION   XR_011778184
VERSION     XR_011778184.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903359"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903359"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903359"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903359"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtg gtgggcaagc tcttagcatt ttcttgaaac gtatccatgc atcatacaaa
       61 gactcatcac tccgttgagt gaatgaatta atctccatcc gaagtag
//
LOCUS       XR_011778185             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903360), ncRNA.
ACCESSION   XR_011778185
VERSION     XR_011778185.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903360"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903360"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903360"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903360"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccatgc ctcatataaa
       61 gtttcgtttg gcttttgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778186             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903361), ncRNA.
ACCESSION   XR_011778186
VERSION     XR_011778186.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903361"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903361"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903361"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903361"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778187             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903362), ncRNA.
ACCESSION   XR_011778187
VERSION     XR_011778187.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903362"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903362"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903362"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903362"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778188             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903363), ncRNA.
ACCESSION   XR_011778188
VERSION     XR_011778188.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903363"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903363"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903363"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903363"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778189             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903364), ncRNA.
ACCESSION   XR_011778189
VERSION     XR_011778189.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903364"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903364"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903364"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903364"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc ctttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778190             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903365), ncRNA.
ACCESSION   XR_011778190
VERSION     XR_011778190.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903365"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903365"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903365"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903365"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tttaaataac tttacaaatc ttgtccatgc ctcatataga
       61 gtttcattcg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778191             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903366), ncRNA.
ACCESSION   XR_011778191
VERSION     XR_011778191.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903366"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903366"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903366"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903366"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttcccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gattttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778192             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903367), ncRNA.
ACCESSION   XR_011778192
VERSION     XR_011778192.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903367"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903367"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903367"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903367"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttcccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gattttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778193             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903368), ncRNA.
ACCESSION   XR_011778193
VERSION     XR_011778193.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903368"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903368"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903368"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903368"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccatgtt gtggacaagc ccgtaacatc tggttgaacc gtacccaagc agcatataaa
       61 gtttcattat ttttctgtct aaaattaaca atttcagttt gaaagt
//
LOCUS       XR_011778194             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903369), ncRNA.
ACCESSION   XR_011778194
VERSION     XR_011778194.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903369"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903369"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903369"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903369"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac tttccaaatc tagtccacgc ctcatataga
       61 gtttcatttg tcttctgtgt aaacgtaaca atttctgctt gaagtct
//
LOCUS       XR_011778195             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903370), ncRNA.
ACCESSION   XR_011778195
VERSION     XR_011778195.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903370"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903370"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903370"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903370"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcac gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778196             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903371), ncRNA.
ACCESSION   XR_011778196
VERSION     XR_011778196.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903371"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903371"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903371"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903371"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaataac tttccgaatc tcgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778197             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903372), ncRNA.
ACCESSION   XR_011778197
VERSION     XR_011778197.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903372"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903372"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903372"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903372"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gagaacaccc tctcaacatc cttccgaatt ttttccatgc ctcatataac
       61 gtttcatttg gcttttgcac gaacgtggca atttctcttt gaagtct
//
LOCUS       XR_011778198             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903374), ncRNA.
ACCESSION   XR_011778198
VERSION     XR_011778198.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903374"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903374"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903374"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903374"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccaaatc ttttccacgc ctcatataga
       61 gtttcatttg acttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778199             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903375), ncRNA.
ACCESSION   XR_011778199
VERSION     XR_011778199.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903375"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903375"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903375"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903375"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccaaatc ttttccacgc ctcatataga
       61 gtttcatttg acttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778200             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903376), ncRNA.
ACCESSION   XR_011778200
VERSION     XR_011778200.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903376"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903376"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903376"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903376"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccgaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778201             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903377), ncRNA.
ACCESSION   XR_011778201
VERSION     XR_011778201.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903377"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903377"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903377"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903377"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttctaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778202             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903379), ncRNA.
ACCESSION   XR_011778202
VERSION     XR_011778202.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903379"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903379"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903379"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903379"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttctgaatc ttgtccacgc ctcaaataac
       61 gttttatttg gcttttgtgc gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778203             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903380), ncRNA.
ACCESSION   XR_011778203
VERSION     XR_011778203.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903380"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903380"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903380"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903380"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcaaatc ttgtccacac ctcatataat
       61 gtttcatttg gcttttgcgc aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778204             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903381), ncRNA.
ACCESSION   XR_011778204
VERSION     XR_011778204.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903381"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903381"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903381"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903381"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaat tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778205             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903382), ncRNA.
ACCESSION   XR_011778205
VERSION     XR_011778205.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903382"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903382"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903382"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903382"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc tggtccatgc ctcatataaa
       61 gtttcatttg gcttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778206             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903383), ncRNA.
ACCESSION   XR_011778206
VERSION     XR_011778206.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903383"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903383"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903383"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903383"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778207             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903384), ncRNA.
ACCESSION   XR_011778207
VERSION     XR_011778207.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903384"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903384"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903384"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903384"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccaagc ttcatataga
       61 gtttcatttg gcttttgtgt gaacataaca atttcttctt gaagtct
//
LOCUS       XR_011778208             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903385), ncRNA.
ACCESSION   XR_011778208
VERSION     XR_011778208.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903385"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903385"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903385"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903385"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aattggtgat tagggcattt cttcagcagg tttttgaaat gctcccatgc ggtgtaaaga
       61 gattcatcat agctttgttt gaagttaatg atgtcattct ttagttt
//
LOCUS       XR_011778209             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903386), ncRNA.
ACCESSION   XR_011778209
VERSION     XR_011778209.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903386"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903386"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903386"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903386"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcac aactttgttt gaagttaatg atgtcattct taagct
//
LOCUS       XR_011778210             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903387), ncRNA.
ACCESSION   XR_011778210
VERSION     XR_011778210.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903387"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903387"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903387"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903387"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc ttttaacaac cttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778211             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903388), ncRNA.
ACCESSION   XR_011778211
VERSION     XR_011778211.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903388"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903388"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903388"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903388"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt aaagtct
//
LOCUS       XR_011778212             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903391), ncRNA.
ACCESSION   XR_011778212
VERSION     XR_011778212.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903391"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903391"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903391"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903391"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccaaatc ttgtccatgc ctcaaataat
       61 gtttcatttg gcttttgtgc gaacgtggca atttctcctt gaagttt
//
LOCUS       XR_011778213             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903392), ncRNA.
ACCESSION   XR_011778213
VERSION     XR_011778213.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903392"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903392"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903392"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903392"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcagg gttttaaaac gctcccatgc agtgtaaagt
       61 gattcatcat aactttattt gaagttaatg atgtcattct tcagctt
//
LOCUS       XR_011778214             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903393), ncRNA.
ACCESSION   XR_011778214
VERSION     XR_011778214.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903393"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903393"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903393"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903393"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gtttctgtgt aaacgtaaca atttctcctt ttagtct
//
LOCUS       XR_011778215             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903394), ncRNA.
ACCESSION   XR_011778215
VERSION     XR_011778215.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903394"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903394"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903394"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903394"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacataaca atttctcctt gaagtct
//
LOCUS       XR_011778216             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903395), ncRNA.
ACCESSION   XR_011778216
VERSION     XR_011778216.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903395"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903395"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903395"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903395"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacataaca atttctcctt gaagtct
//
LOCUS       XR_011778217             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903396), ncRNA.
ACCESSION   XR_011778217
VERSION     XR_011778217.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903396"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903396"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903396"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903396"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778218             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903397), ncRNA.
ACCESSION   XR_011778218
VERSION     XR_011778218.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903397"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903397"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903397"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903397"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tcttaacaac tttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778219             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903398), ncRNA.
ACCESSION   XR_011778219
VERSION     XR_011778219.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903398"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903398"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903398"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903398"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatggt tcggacatcc tcttagcttt ttggaaaatc gattccatgc ttcatacaag
       61 gtttccatcg gcttttgaca gaattgggta atttcgtgtt ggagtct
//
LOCUS       XR_011778220             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903399), ncRNA.
ACCESSION   XR_011778220
VERSION     XR_011778220.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903399"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903399"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903399"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903399"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtgggaaagc tcttagtagc ttcttgaagc gtactcatgc atcatacaaa
       61 ctctcatcac cccgttgtgt gaacccatta atctccattc aaagccg
//
LOCUS       XR_011778221             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903400), ncRNA.
ACCESSION   XR_011778221
VERSION     XR_011778221.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903400"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903400"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903400"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903400"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcgtttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778222             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903401), ncRNA.
ACCESSION   XR_011778222
VERSION     XR_011778222.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903401"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903401"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903401"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903401"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 atttcatttg gtttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778223             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903402), ncRNA.
ACCESSION   XR_011778223
VERSION     XR_011778223.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903402"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903402"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903402"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903402"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtggacatcc tcttaacaac tttccaaatc ttgtccacgc ctcatataat
       61 gtttcatttg gtttttgtgt gaacgtaaat atttctcctt aaagtct
//
LOCUS       XR_011778224             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903403), ncRNA.
ACCESSION   XR_011778224
VERSION     XR_011778224.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903403"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903403"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903403"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903403"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgttaca atttcttctt gaagtct
//
LOCUS       XR_011778225             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903404), ncRNA.
ACCESSION   XR_011778225
VERSION     XR_011778225.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903404"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903404"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903404"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903404"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaat tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778226             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903405), ncRNA.
ACCESSION   XR_011778226
VERSION     XR_011778226.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903405"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903405"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903405"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903405"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttctaaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778227             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903406), ncRNA.
ACCESSION   XR_011778227
VERSION     XR_011778227.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903406"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903406"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903406"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903406"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcagg cttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct ttagttt
//
LOCUS       XR_011778228             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903407), ncRNA.
ACCESSION   XR_011778228
VERSION     XR_011778228.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903407"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903407"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903407"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903407"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtg gtggacaagc tctaaacatc ttcttaaaac gtgtccttgc atcatacaaa
       61 gactcatcac ttcattgagc gaacccatta atttccattc taagtcg
//
LOCUS       XR_011778229             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903408), ncRNA.
ACCESSION   XR_011778229
VERSION     XR_011778229.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903408"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903408"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903408"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903408"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttccaaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacttaaca atttctcctt gaagtct
//
LOCUS       XR_011778230             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903409), ncRNA.
ACCESSION   XR_011778230
VERSION     XR_011778230.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903409"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903409"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903409"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903409"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccatgtt gcggacatga gcgtaacaaa gtagcaaaac ggtcccaagc atcaaataat
       61 gtctcactgc tcttttgtct gaattgtgaa atttctgctt gaagtct
//
LOCUS       XR_011778231             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903411), ncRNA.
ACCESSION   XR_011778231
VERSION     XR_011778231.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903411"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903411"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903411"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903411"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcaga gttttgaatc gctcccatgt agtgtaaaga
       61 gattcatcat aactttgttt aaatttaatg atgtcattct taagtt
//
LOCUS       XR_011778232             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903412), ncRNA.
ACCESSION   XR_011778232
VERSION     XR_011778232.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903412"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903412"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903412"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903412"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttctgaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt aaagtct
//
LOCUS       XR_011778233             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903413), ncRNA.
ACCESSION   XR_011778233
VERSION     XR_011778233.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903413"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903413"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903413"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903413"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc tggtccatgc ctcatataga
       61 gtttcatttg atttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778234             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903414), ncRNA.
ACCESSION   XR_011778234
VERSION     XR_011778234.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903414"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903414"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903414"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903414"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcattcg gcttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778235             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903415), ncRNA.
ACCESSION   XR_011778235
VERSION     XR_011778235.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903415"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903415"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903415"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903415"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778236             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903416), ncRNA.
ACCESSION   XR_011778236
VERSION     XR_011778236.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903416"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903416"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903416"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903416"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gaggacatct tctcaacaac tttccaaatc ttgtccatgc ttcaaataga
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778237             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903417), ncRNA.
ACCESSION   XR_011778237
VERSION     XR_011778237.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903417"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903417"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903417"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903417"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgagc gaacgtaaca atttcttctt gaagtct
//
LOCUS       XR_011778238             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903418), ncRNA.
ACCESSION   XR_011778238
VERSION     XR_011778238.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903418"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903418"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903418"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903418"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778239             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903419), ncRNA.
ACCESSION   XR_011778239
VERSION     XR_011778239.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903419"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903419"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903419"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903419"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt aaagtct
//
LOCUS       XR_011778240             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903420), ncRNA.
ACCESSION   XR_011778240
VERSION     XR_011778240.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903420"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903420"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903420"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903420"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttatcctt gaagtct
//
LOCUS       XR_011778241             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903421), ncRNA.
ACCESSION   XR_011778241
VERSION     XR_011778241.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903421"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903421"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903421"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903421"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778242             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903422), ncRNA.
ACCESSION   XR_011778242
VERSION     XR_011778242.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903422"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903422"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903422"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903422"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtg ttggacaagc tcgtaacatc gtcttaaaat gcatccatgc atcatacaaa
       61 gactcatcac tccgttgagc gaacccatta atttccattc taagtcg
//
LOCUS       XR_011778243             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903423), ncRNA.
ACCESSION   XR_011778243
VERSION     XR_011778243.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903423"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903423"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903423"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903423"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatggt ttggacaacc tcttagtatt ttggaaaatc gattccatgc ttcatacaag
       61 gtttccatcg gcttttgaca aaattgggta atttcttgtt ggagtct
//
LOCUS       XR_011778244             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903424), ncRNA.
ACCESSION   XR_011778244
VERSION     XR_011778244.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903424"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903424"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903424"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903424"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgcat gaacgtaaca atttctcctt taagtct
//
LOCUS       XR_011778245             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903425), ncRNA.
ACCESSION   XR_011778245
VERSION     XR_011778245.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903425"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903425"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903425"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903425"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcataaaga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778246             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903426), ncRNA.
ACCESSION   XR_011778246
VERSION     XR_011778246.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903426"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903426"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903426"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903426"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtgat tcgggcatct tcaaagcaag tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcgc atacttgttg aaagtttatg atatcattcc taagtct
//
LOCUS       XR_011778247             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903427), ncRNA.
ACCESSION   XR_011778247
VERSION     XR_011778247.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903427"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903427"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903427"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903427"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778248             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903428), ncRNA.
ACCESSION   XR_011778248
VERSION     XR_011778248.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903428"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903428"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903428"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903428"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttatccacgc ctcatataga
       61 gtttcattcg gtttctgtgt aaacgtaaca atttcttctt gaagtct
//
LOCUS       XR_011778249             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903429), ncRNA.
ACCESSION   XR_011778249
VERSION     XR_011778249.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903429"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903429"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903429"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903429"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgtgt aaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778250             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903430), ncRNA.
ACCESSION   XR_011778250
VERSION     XR_011778250.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903430"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903430"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903430"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903430"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc tggtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778251             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903431), ncRNA.
ACCESSION   XR_011778251
VERSION     XR_011778251.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903431"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903431"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903431"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903431"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg acttctgtgt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778252             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903432), ncRNA.
ACCESSION   XR_011778252
VERSION     XR_011778252.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903432"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903432"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903432"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903432"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccgtgtt gaggacatcc tctcaacatt ttaccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778253             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903433), ncRNA.
ACCESSION   XR_011778253
VERSION     XR_011778253.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903433"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903433"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903433"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903433"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcagg attttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct taagct
//
LOCUS       XR_011778254             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903434), ncRNA.
ACCESSION   XR_011778254
VERSION     XR_011778254.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903434"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903434"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903434"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903434"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcgaacatcc tctcaataac tttccaaatc ttttccatgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778255             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903437), ncRNA.
ACCESSION   XR_011778255
VERSION     XR_011778255.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903437"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903437"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903437"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903437"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcgaacatcc tctcaataac tttccaaatc ttttccatgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778256             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903438), ncRNA.
ACCESSION   XR_011778256
VERSION     XR_011778256.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903438"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903438"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903438"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903438"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccacgc ctcataaaga
       61 gtttcatttg gcttttgtgt gaacgtaaat atttctcctt gaagtct
//
LOCUS       XR_011778257             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903439), ncRNA.
ACCESSION   XR_011778257
VERSION     XR_011778257.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903439"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903439"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903439"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903439"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg acttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778258             103 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903440), ncRNA.
ACCESSION   XR_011778258
VERSION     XR_011778258.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..103
                     /gene="LOC139903440"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903440"
     ncRNA           1..103
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903440"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903440"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gctttgaatc gctcccatgc agtgtaaaga
       61 gattcataac tttgtttaaa gttaatgatg tcattcttaa gct
//
LOCUS       XR_011778259             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903441), ncRNA.
ACCESSION   XR_011778259
VERSION     XR_011778259.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903441"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903441"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903441"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903441"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aggtggtgat tagggtattt cttcagcaag attttgaatc gctctcatgc agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct taagctt
//
LOCUS       XR_011778260             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903442), ncRNA.
ACCESSION   XR_011778260
VERSION     XR_011778260.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903442"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903442"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903442"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903442"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaat tttctaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778261             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903443), ncRNA.
ACCESSION   XR_011778261
VERSION     XR_011778261.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903443"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903443"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903443"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903443"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccatgtt gtggacaagc cctaagtagt tgcccataac gaacccaatc atcatataag
       61 gtttcattat tcttttgtcg gaaattagag attttcgttt gaagagt
//
LOCUS       XR_011778262             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903444), ncRNA.
ACCESSION   XR_011778262
VERSION     XR_011778262.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903444"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903444"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903444"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903444"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatacaga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778263             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903445), ncRNA.
ACCESSION   XR_011778263
VERSION     XR_011778263.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903445"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903445"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903445"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903445"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtcaatgc ctcatataac
       61 gtttcatttg gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778264             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903446), ncRNA.
ACCESSION   XR_011778264
VERSION     XR_011778264.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903446"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903446"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903446"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903446"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttatccacgc ctcatataga
       61 gtttcattcg gcttctgtgt gaacgtaaaa atttctcctt gaagtct
//
LOCUS       XR_011778265             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903447), ncRNA.
ACCESSION   XR_011778265
VERSION     XR_011778265.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903447"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903447"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903447"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903447"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatgtt gcggacaacc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778266             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903448), ncRNA.
ACCESSION   XR_011778266
VERSION     XR_011778266.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903448"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903448"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903448"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903448"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aagccatgtt gaggacatcc tcttaacaac tttccaaatc ttgtccacgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778267             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903449), ncRNA.
ACCESSION   XR_011778267
VERSION     XR_011778267.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903449"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903449"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903449"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903449"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt tttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaaattaatg atgtcattct ttagttt
//
LOCUS       XR_011778268             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903450), ncRNA.
ACCESSION   XR_011778268
VERSION     XR_011778268.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903450"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903450"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903450"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903450"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtgat tcgggtatct tcgaagcaag tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcat atgcttgttg aaagtttacg atatcattcc taagtct
//
LOCUS       XR_011778269             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903451), ncRNA.
ACCESSION   XR_011778269
VERSION     XR_011778269.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903451"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903451"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903451"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903451"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gttttgaaat gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778270             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903453), ncRNA.
ACCESSION   XR_011778270
VERSION     XR_011778270.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903453"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903453"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903453"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903453"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttttcgaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgcgt gaacgtaaca atttttcctt gaagtct
//
LOCUS       XR_011778271             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903454), ncRNA.
ACCESSION   XR_011778271
VERSION     XR_011778271.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903454"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903454"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903454"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903454"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt aaacgtaaca atttcttctt gaagtct
//
LOCUS       XR_011778272             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903455), ncRNA.
ACCESSION   XR_011778272
VERSION     XR_011778272.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903455"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903455"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903455"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903455"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaacaac ttttcaaaac ttgtccacgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctgctt gaagtct
//
LOCUS       XR_011778273             108 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903456), ncRNA.
ACCESSION   XR_011778273
VERSION     XR_011778273.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..108
                     /gene="LOC139903456"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903456"
     ncRNA           1..108
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903456"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903456"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccgtgtt gaggacatac tctaagcatt ttattgaatc gggtccaagc ttcataaaga
       61 gtctcattag tcttttgttt aaagtgattt atgtcacttt ataacttt
//
LOCUS       XR_011778274             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903457), ncRNA.
ACCESSION   XR_011778274
VERSION     XR_011778274.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903457"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903457"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903457"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903457"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtggt ttgggcatct tcgaagaaac tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcgt atgcttgttg aaagtttaca atatcattcc taagtct
//
LOCUS       XR_011778275             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903458), ncRNA.
ACCESSION   XR_011778275
VERSION     XR_011778275.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903458"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903458"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903458"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903458"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tatggcattt cttcagcaga gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct taagct
//
LOCUS       XR_011778276             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903459), ncRNA.
ACCESSION   XR_011778276
VERSION     XR_011778276.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903459"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903459"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903459"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903459"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg acttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778277             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903460), ncRNA.
ACCESSION   XR_011778277
VERSION     XR_011778277.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903460"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903460"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903460"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903460"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc tggtccatgc ttcatataaa
       61 gtttcatttg gtttttgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778278             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903461), ncRNA.
ACCESSION   XR_011778278
VERSION     XR_011778278.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903461"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903461"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903461"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903461"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgcg gtgggaaagc tcttaacatt ttcttgaatc gtacccacgc atcatacaaa
       61 gattcatcac cccgttgggt gaacccatta atctccattc gaagtcg
//
LOCUS       XR_011778279             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903462), ncRNA.
ACCESSION   XR_011778279
VERSION     XR_011778279.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903462"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903462"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903462"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903462"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtggacatcc tctcaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcattca gtttctgtgt aaacgtagca atttctgctt gaagtct
//
LOCUS       XR_011778280             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903463), ncRNA.
ACCESSION   XR_011778280
VERSION     XR_011778280.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903463"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903463"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903463"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903463"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaat tttccgaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778281             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903464), ncRNA.
ACCESSION   XR_011778281
VERSION     XR_011778281.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903464"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903464"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903464"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903464"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg ccttttgtgt gaacgtaaca atttttcctt gaagtct
//
LOCUS       XR_011778282             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903465), ncRNA.
ACCESSION   XR_011778282
VERSION     XR_011778282.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903465"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903465"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903465"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903465"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttttgcat gaacgtaaca atttctcctt ggagtct
//
LOCUS       XR_011778283             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903466), ncRNA.
ACCESSION   XR_011778283
VERSION     XR_011778283.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903466"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903466"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903466"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903466"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttaccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacataata atttctcctt gaagtct
//
LOCUS       XR_011778284             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903467), ncRNA.
ACCESSION   XR_011778284
VERSION     XR_011778284.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903467"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903467"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903467"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903467"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttttccacgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctgctt gaagtct
//
LOCUS       XR_011778285             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903468), ncRNA.
ACCESSION   XR_011778285
VERSION     XR_011778285.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903468"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903468"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903468"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903468"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcaag gttttgaatc gctcccatgt agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct taagct
//
LOCUS       XR_011778286             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903469), ncRNA.
ACCESSION   XR_011778286
VERSION     XR_011778286.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903469"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903469"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903469"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903469"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgcgt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778287             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903470), ncRNA.
ACCESSION   XR_011778287
VERSION     XR_011778287.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903470"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903470"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903470"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903470"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gtttttgcgc gaacgtaaca atttcttctt gaagtct
//
LOCUS       XR_011778288             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903471), ncRNA.
ACCESSION   XR_011778288
VERSION     XR_011778288.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903471"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903471"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903471"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903471"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataac tttccaaatc tggtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778289             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903472), ncRNA.
ACCESSION   XR_011778289
VERSION     XR_011778289.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903472"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903472"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903472"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903472"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778290             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903473), ncRNA.
ACCESSION   XR_011778290
VERSION     XR_011778290.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903473"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903473"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903473"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903473"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778291             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903474), ncRNA.
ACCESSION   XR_011778291
VERSION     XR_011778291.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903474"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903474"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903474"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903474"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtg gtggacattc ccttaacatc tttttgaaac gaatccaagc gtcatacaat
       61 gattcatcac ccctttgagc aaaagcattg atttccattt taagtct
//
LOCUS       XR_011778292             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903475), ncRNA.
ACCESSION   XR_011778292
VERSION     XR_011778292.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903475"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903475"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903475"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903475"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc ctttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778293             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903476), ncRNA.
ACCESSION   XR_011778293
VERSION     XR_011778293.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903476"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903476"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903476"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903476"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcattta gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778294             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903477), ncRNA.
ACCESSION   XR_011778294
VERSION     XR_011778294.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903477"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903477"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903477"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903477"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778295             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903478), ncRNA.
ACCESSION   XR_011778295
VERSION     XR_011778295.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903478"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903478"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903478"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903478"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtggt tcgggcatct tcgaagcaaa tgtttaaatc tctcccatgc agtgtagagt
       61 gattcatcgg aagcttgttg aaagtttatg atgtcattcc taagttt
//
LOCUS       XR_011778296             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903479), ncRNA.
ACCESSION   XR_011778296
VERSION     XR_011778296.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903479"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903479"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903479"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903479"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataac tttctagatc ttgtccacgc ttcatataag
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778297             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903480), ncRNA.
ACCESSION   XR_011778297
VERSION     XR_011778297.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903480"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903480"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903480"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903480"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 ataccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataat
       61 gtttcattta gcttttgtgc aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778298             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903481), ncRNA.
ACCESSION   XR_011778298
VERSION     XR_011778298.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903481"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903481"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903481"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903481"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactatgtt gtggacattc tcttaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778299             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903482), ncRNA.
ACCESSION   XR_011778299
VERSION     XR_011778299.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903482"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903482"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903482"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903482"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778300             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903484), ncRNA.
ACCESSION   XR_011778300
VERSION     XR_011778300.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903484"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903484"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903484"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903484"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataaa
       61 gtttcgtttg gcttttgtgt gaatgtaaca atttcttctt gaagtct
//
LOCUS       XR_011778301             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903485), ncRNA.
ACCESSION   XR_011778301
VERSION     XR_011778301.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903485"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903485"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903485"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903485"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtgggcatcc tcttaataac tttccaaatc ttgtccacgc ttcatataga
       61 gtttcatttg gcttttgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778302             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903486), ncRNA.
ACCESSION   XR_011778302
VERSION     XR_011778302.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903486"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903486"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903486"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903486"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt attcagaagc attttgaatc gctctcatgc ggtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct tgagct
//
LOCUS       XR_011778303             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903487), ncRNA.
ACCESSION   XR_011778303
VERSION     XR_011778303.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903487"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903487"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903487"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903487"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccacgc ctcaaataac
       61 gtttcatttg gcttttgcgc gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778304             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903488), ncRNA.
ACCESSION   XR_011778304
VERSION     XR_011778304.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903488"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903488"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903488"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903488"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgcg gtgggcaatc tcttagcatt ttcttgaatc gtacccatgc atcataccaa
       61 gtctcatcac cccgtttggt gaacccatta atatctattc gaagttg
//
LOCUS       XR_011778305             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903489), ncRNA.
ACCESSION   XR_011778305
VERSION     XR_011778305.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903489"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903489"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903489"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903489"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaacggtgat tcgggcatct tcgaagcaag tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcgc atacttgttg aaagtttacg atgtcattcc taagtct
//
LOCUS       XR_011778306             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903490), ncRNA.
ACCESSION   XR_011778306
VERSION     XR_011778306.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903490"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903490"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903490"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903490"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778307             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903491), ncRNA.
ACCESSION   XR_011778307
VERSION     XR_011778307.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903491"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903491"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903491"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903491"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778308             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903492), ncRNA.
ACCESSION   XR_011778308
VERSION     XR_011778308.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903492"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903492"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903492"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903492"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778309             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903493), ncRNA.
ACCESSION   XR_011778309
VERSION     XR_011778309.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903493"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903493"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903493"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903493"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778310             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903494), ncRNA.
ACCESSION   XR_011778310
VERSION     XR_011778310.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903494"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903494"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903494"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903494"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcttt gaagtct
//
LOCUS       XR_011778311             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903495), ncRNA.
ACCESSION   XR_011778311
VERSION     XR_011778311.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903495"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903495"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903495"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903495"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778312             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903496), ncRNA.
ACCESSION   XR_011778312
VERSION     XR_011778312.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903496"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903496"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903496"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903496"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778313             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903497), ncRNA.
ACCESSION   XR_011778313
VERSION     XR_011778313.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903497"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903497"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903497"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903497"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778314             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903498), ncRNA.
ACCESSION   XR_011778314
VERSION     XR_011778314.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903498"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903498"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903498"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903498"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778315             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903500), ncRNA.
ACCESSION   XR_011778315
VERSION     XR_011778315.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903500"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903500"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903500"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903500"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttctaaatc ttgtccacgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778316             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903501), ncRNA.
ACCESSION   XR_011778316
VERSION     XR_011778316.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903501"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903501"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903501"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903501"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatct tcttaataaa tttccaaatc tagtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778317             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903502), ncRNA.
ACCESSION   XR_011778317
VERSION     XR_011778317.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903502"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903502"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903502"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903502"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccacgc ctcatatagc
       61 gtttcattcg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778318             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903503), ncRNA.
ACCESSION   XR_011778318
VERSION     XR_011778318.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903503"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903503"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903503"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903503"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agttggtgat tagggcactt cttaagcagg tttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct ttagttt
//
LOCUS       XR_011778319             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903504), ncRNA.
ACCESSION   XR_011778319
VERSION     XR_011778319.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903504"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903504"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903504"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903504"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc tagtccacgc ctcatataga
       61 gtttcattcg ttttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778320             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903505), ncRNA.
ACCESSION   XR_011778320
VERSION     XR_011778320.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903505"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903505"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903505"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903505"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgcg gtggacaagc tcttagcatt ttcttgaatc gtacccacgc atcatacaaa
       61 gactcatcac ctcgttgggt gaatccatta atctccattc gaagtcg
//
LOCUS       XR_011778321             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903506), ncRNA.
ACCESSION   XR_011778321
VERSION     XR_011778321.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903506"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903506"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903506"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903506"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc aatgtaaaga
       61 gattcatcat aactttgttt gaaattaatg atgtcattct ttagttt
//
LOCUS       XR_011778322             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903507), ncRNA.
ACCESSION   XR_011778322
VERSION     XR_011778322.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903507"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903507"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903507"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903507"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc tggtccatgc ttcatataaa
       61 gtttcatttg gtttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778323             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903508), ncRNA.
ACCESSION   XR_011778323
VERSION     XR_011778323.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903508"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903508"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903508"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903508"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttacac gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778324             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903509), ncRNA.
ACCESSION   XR_011778324
VERSION     XR_011778324.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903509"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903509"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903509"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903509"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaacaac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg acttttgcgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778325             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903510), ncRNA.
ACCESSION   XR_011778325
VERSION     XR_011778325.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903510"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903510"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903510"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903510"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgttt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778326             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903511), ncRNA.
ACCESSION   XR_011778326
VERSION     XR_011778326.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903511"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903511"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903511"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903511"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgttt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778327             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903512), ncRNA.
ACCESSION   XR_011778327
VERSION     XR_011778327.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903512"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903512"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903512"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903512"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778328             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903513), ncRNA.
ACCESSION   XR_011778328
VERSION     XR_011778328.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903513"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903513"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903513"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903513"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gaggacatcc tctcaataac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778329             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903514), ncRNA.
ACCESSION   XR_011778329
VERSION     XR_011778329.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903514"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903514"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903514"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903514"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc ttgtccacgc ctcataaaga
       61 gtttcatttg gcttttgtgt gaacgtaact atttctcctt gaagtct
//
LOCUS       XR_011778330             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903516), ncRNA.
ACCESSION   XR_011778330
VERSION     XR_011778330.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903516"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903516"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903516"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903516"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaataac tttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gattttgcac gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778331             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903517), ncRNA.
ACCESSION   XR_011778331
VERSION     XR_011778331.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903517"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903517"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903517"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903517"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778332             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903518), ncRNA.
ACCESSION   XR_011778332
VERSION     XR_011778332.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903518"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903518"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903518"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903518"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778333             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903519), ncRNA.
ACCESSION   XR_011778333
VERSION     XR_011778333.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903519"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903519"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903519"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903519"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tcttaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagttt
//
LOCUS       XR_011778334             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903520), ncRNA.
ACCESSION   XR_011778334
VERSION     XR_011778334.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903520"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903520"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903520"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903520"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccacgc ctcatataac
       61 gtttcatttg gcttttgcac gaacgtcgca atttctcctt gaagtct
//
LOCUS       XR_011778335             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903521), ncRNA.
ACCESSION   XR_011778335
VERSION     XR_011778335.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903521"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903521"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903521"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903521"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccacgc ctcatataac
       61 gtttcatttg gcttttgcac gaacgtcgca atttctcctt gaagtct
//
LOCUS       XR_011778336             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903522), ncRNA.
ACCESSION   XR_011778336
VERSION     XR_011778336.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903522"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903522"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903522"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903522"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc tggtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaaagtaaca atttctcctt gaagtct
//
LOCUS       XR_011778337             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903523), ncRNA.
ACCESSION   XR_011778337
VERSION     XR_011778337.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903523"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903523"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903523"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903523"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778338             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903524), ncRNA.
ACCESSION   XR_011778338
VERSION     XR_011778338.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903524"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903524"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903524"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903524"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778339             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903525), ncRNA.
ACCESSION   XR_011778339
VERSION     XR_011778339.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903525"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903525"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903525"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903525"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778340             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903526), ncRNA.
ACCESSION   XR_011778340
VERSION     XR_011778340.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903526"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903526"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903526"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903526"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tactaataat tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaacg atttctcctt gaagtct
//
LOCUS       XR_011778341             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903527), ncRNA.
ACCESSION   XR_011778341
VERSION     XR_011778341.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903527"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903527"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903527"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903527"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778342             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903528), ncRNA.
ACCESSION   XR_011778342
VERSION     XR_011778342.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903528"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903528"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903528"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903528"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778343             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903529), ncRNA.
ACCESSION   XR_011778343
VERSION     XR_011778343.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903529"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903529"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903529"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903529"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778344             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903530), ncRNA.
ACCESSION   XR_011778344
VERSION     XR_011778344.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903530"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903530"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903530"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903530"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778345             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903531), ncRNA.
ACCESSION   XR_011778345
VERSION     XR_011778345.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903531"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903531"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903531"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903531"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778346             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903532), ncRNA.
ACCESSION   XR_011778346
VERSION     XR_011778346.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903532"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903532"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903532"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903532"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778347             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903533), ncRNA.
ACCESSION   XR_011778347
VERSION     XR_011778347.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903533"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903533"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903533"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903533"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778348             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903534), ncRNA.
ACCESSION   XR_011778348
VERSION     XR_011778348.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903534"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903534"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903534"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903534"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778349             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903535), ncRNA.
ACCESSION   XR_011778349
VERSION     XR_011778349.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903535"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903535"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903535"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903535"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778350             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903536), ncRNA.
ACCESSION   XR_011778350
VERSION     XR_011778350.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903536"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903536"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903536"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903536"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778351             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903537), ncRNA.
ACCESSION   XR_011778351
VERSION     XR_011778351.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903537"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903537"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903537"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903537"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778352             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903538), ncRNA.
ACCESSION   XR_011778352
VERSION     XR_011778352.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903538"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903538"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903538"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903538"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778353             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903539), ncRNA.
ACCESSION   XR_011778353
VERSION     XR_011778353.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903539"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903539"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903539"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903539"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778354             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903540), ncRNA.
ACCESSION   XR_011778354
VERSION     XR_011778354.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903540"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903540"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903540"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903540"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778355             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903541), ncRNA.
ACCESSION   XR_011778355
VERSION     XR_011778355.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903541"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903541"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903541"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903541"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778356             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903542), ncRNA.
ACCESSION   XR_011778356
VERSION     XR_011778356.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903542"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903542"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903542"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903542"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778357             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903543), ncRNA.
ACCESSION   XR_011778357
VERSION     XR_011778357.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903543"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903543"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903543"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903543"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778358             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903544), ncRNA.
ACCESSION   XR_011778358
VERSION     XR_011778358.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903544"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903544"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903544"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903544"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778359             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903545), ncRNA.
ACCESSION   XR_011778359
VERSION     XR_011778359.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903545"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903545"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903545"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903545"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778360             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903547), ncRNA.
ACCESSION   XR_011778360
VERSION     XR_011778360.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903547"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903547"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903547"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903547"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778361             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903548), ncRNA.
ACCESSION   XR_011778361
VERSION     XR_011778361.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903548"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903548"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903548"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903548"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778362             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903549), ncRNA.
ACCESSION   XR_011778362
VERSION     XR_011778362.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903549"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903549"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903549"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903549"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778363             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903550), ncRNA.
ACCESSION   XR_011778363
VERSION     XR_011778363.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903550"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903550"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903550"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903550"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778364             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903551), ncRNA.
ACCESSION   XR_011778364
VERSION     XR_011778364.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903551"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903551"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903551"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903551"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778365             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903552), ncRNA.
ACCESSION   XR_011778365
VERSION     XR_011778365.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903552"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903552"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903552"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903552"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttctaaatc tagtccatgc ctcatataga
       61 gtttcattcg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778366             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903553), ncRNA.
ACCESSION   XR_011778366
VERSION     XR_011778366.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903553"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903553"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903553"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903553"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatggt gcggacatcc tctcaataac ttttcaaatc tggtccatgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778367             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903554), ncRNA.
ACCESSION   XR_011778367
VERSION     XR_011778367.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903554"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903554"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903554"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903554"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtgat tcgggcatct ttgaagcaag tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcgt aggcttgttg aaagtttacg atatcattcc taagtct
//
LOCUS       XR_011778368             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903555), ncRNA.
ACCESSION   XR_011778368
VERSION     XR_011778368.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903555"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903555"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903555"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903555"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataat tttcaaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gtttatgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778369             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903556), ncRNA.
ACCESSION   XR_011778369
VERSION     XR_011778369.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903556"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903556"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903556"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903556"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccatgtt gcggacacga gcgtaacaaa gtagcaaaac ggtcccaagc atcaaataat
       61 gtctcactgc tcttttgtct aaattgtgaa atttctgctt gaagtct
//
LOCUS       XR_011778370             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903557), ncRNA.
ACCESSION   XR_011778370
VERSION     XR_011778370.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903557"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903557"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903557"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903557"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc tagtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt aaatgtaaca atttcttctt gaagtct
//
LOCUS       XR_011778371             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903558), ncRNA.
ACCESSION   XR_011778371
VERSION     XR_011778371.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903558"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903558"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903558"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903558"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gattctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778372             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903560), ncRNA.
ACCESSION   XR_011778372
VERSION     XR_011778372.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903560"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903560"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903560"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903560"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaataac ttttcaaatc ttgtccatgc ctcatataga
       61 gtttcatttg acttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778373             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903561), ncRNA.
ACCESSION   XR_011778373
VERSION     XR_011778373.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903561"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903561"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903561"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903561"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttcaaatct tgtccatgcc tcatatagag
       61 tttcattcta tttctgtgtg aacgtaacaa tttctccttg aagtct
//
LOCUS       XR_011778374             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903563), ncRNA.
ACCESSION   XR_011778374
VERSION     XR_011778374.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903563"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903563"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903563"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903563"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac tttccatatc ttgtccatgc ctcatataga
       61 gtttcatttg ttttctgtgt aaacgtaaca atttctgctt gaagtct
//
LOCUS       XR_011778375             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903564), ncRNA.
ACCESSION   XR_011778375
VERSION     XR_011778375.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903564"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903564"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903564"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903564"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataat tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtgaca atttctcctt gaagtct
//
LOCUS       XR_011778376             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903565), ncRNA.
ACCESSION   XR_011778376
VERSION     XR_011778376.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903565"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903565"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903565"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903565"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccatgc ctcaaataaa
       61 gtttcatttg gcttttgtgc gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778377             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903566), ncRNA.
ACCESSION   XR_011778377
VERSION     XR_011778377.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903566"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903566"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903566"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903566"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttcccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaatgtaata atttctcctt gaagtct
//
LOCUS       XR_011778378             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903567), ncRNA.
ACCESSION   XR_011778378
VERSION     XR_011778378.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903567"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903567"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903567"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903567"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggtattt cttcagtagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcaattt
//
LOCUS       XR_011778379             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903568), ncRNA.
ACCESSION   XR_011778379
VERSION     XR_011778379.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903568"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903568"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903568"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903568"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcatttgttt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778380             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903569), ncRNA.
ACCESSION   XR_011778380
VERSION     XR_011778380.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903569"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903569"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903569"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903569"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778381             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903570), ncRNA.
ACCESSION   XR_011778381
VERSION     XR_011778381.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903570"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903570"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903570"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903570"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcattcg gtttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778382             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903571), ncRNA.
ACCESSION   XR_011778382
VERSION     XR_011778382.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903571"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903571"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903571"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903571"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttccgcagg attttgaatc actcccatgc agtataatga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778383             108 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903572), ncRNA.
ACCESSION   XR_011778383
VERSION     XR_011778383.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..108
                     /gene="LOC139903572"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903572"
     ncRNA           1..108
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903572"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903572"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccgtgtt gaggacatac cctaagcatt ttgttgaatc ggttccaagc ttcataaaga
       61 gtttcattag gcttttgcat aaagtgattt atatcacttt gcaatttt
//
LOCUS       XR_011778384             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903573), ncRNA.
ACCESSION   XR_011778384
VERSION     XR_011778384.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903573"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903573"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903573"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903573"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agttggtgat taaggcattt cttcagcagg gttttgaaac gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778385             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903574), ncRNA.
ACCESSION   XR_011778385
VERSION     XR_011778385.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903574"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903574"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903574"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903574"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataat tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778386             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903575), ncRNA.
ACCESSION   XR_011778386
VERSION     XR_011778386.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903575"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903575"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903575"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903575"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcagg gttttgaaac gctcccatgc agtgtagaga
       61 gattcatcat aactttgttt gaagttaatg atgtaattct tcagctt
//
LOCUS       XR_011778387             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903576), ncRNA.
ACCESSION   XR_011778387
VERSION     XR_011778387.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903576"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903576"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903576"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903576"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778388             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903577), ncRNA.
ACCESSION   XR_011778388
VERSION     XR_011778388.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903577"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903577"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903577"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903577"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt aaacgtaaca atttctgctt gaagtct
//
LOCUS       XR_011778389             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903579), ncRNA.
ACCESSION   XR_011778389
VERSION     XR_011778389.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903579"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903579"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903579"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903579"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tttcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778390             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903580), ncRNA.
ACCESSION   XR_011778390
VERSION     XR_011778390.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903580"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903580"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903580"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903580"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccatggt ttggacaacc tcttagcatt ttggaaaacc gattccatgc ttcatataag
       61 gtttccatcg gcttttgaca gaattaggta atttcttgtt ggagtct
//
LOCUS       XR_011778391             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903581), ncRNA.
ACCESSION   XR_011778391
VERSION     XR_011778391.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903581"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903581"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903581"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903581"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccatggt ttggacaacc tcttagcatt ttggaaaacc gattccatgc ttcatataag
       61 gtttccatcg gcttttgaca gaattaggta atttcttgtt ggagtct
//
LOCUS       XR_011778392             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903582), ncRNA.
ACCESSION   XR_011778392
VERSION     XR_011778392.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903582"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903582"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903582"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903582"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tcttaatatt ttttcgaatc ttgtccacgc ctcatataac
       61 gtttcatttg atttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778393             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903583), ncRNA.
ACCESSION   XR_011778393
VERSION     XR_011778393.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903583"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903583"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903583"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903583"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcatttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778394             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903584), ncRNA.
ACCESSION   XR_011778394
VERSION     XR_011778394.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903584"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903584"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903584"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903584"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtgat tcgggcatct tcgaagcaag tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcgt atgcttgttg aaagtttacg atatcattcc taagttt
//
LOCUS       XR_011778395             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903585), ncRNA.
ACCESSION   XR_011778395
VERSION     XR_011778395.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903585"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903585"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903585"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903585"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacattc tcttaataat tttccaaatc tggtccacgc ctcatataga
       61 gtttcatttg tcttttgtgt aaacgtaaca atttatcctt gaagtat
//
LOCUS       XR_011778396             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903586), ncRNA.
ACCESSION   XR_011778396
VERSION     XR_011778396.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903586"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903586"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903586"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903586"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778397             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903587), ncRNA.
ACCESSION   XR_011778397
VERSION     XR_011778397.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903587"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903587"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903587"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903587"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccgtgtt gcggacatga gcgtaacaaa gtagcaaaac ggtcccaagc atcaaataat
       61 gtctcactgc tcttttgtct aaattgtgaa atttctgctt gaagtct
//
LOCUS       XR_011778398             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903588), ncRNA.
ACCESSION   XR_011778398
VERSION     XR_011778398.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903588"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903588"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903588"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903588"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaagacatcc tctcaaaaac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778399             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903589), ncRNA.
ACCESSION   XR_011778399
VERSION     XR_011778399.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903589"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903589"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903589"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903589"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtgat tcaggcatct tcgaagcaag tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcat atgcttgttg aaagtttacg atatcattcc taagtct
//
LOCUS       XR_011778400             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903590), ncRNA.
ACCESSION   XR_011778400
VERSION     XR_011778400.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903590"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903590"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903590"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903590"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccttgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778401             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903591), ncRNA.
ACCESSION   XR_011778401
VERSION     XR_011778401.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903591"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903591"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903591"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903591"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccattc ctcatataac
       61 gtttcatttg gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778402             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903592), ncRNA.
ACCESSION   XR_011778402
VERSION     XR_011778402.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903592"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903592"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903592"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903592"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaaaaat tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778403             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903593), ncRNA.
ACCESSION   XR_011778403
VERSION     XR_011778403.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903593"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903593"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903593"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903593"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcaaatc ttatccatgc cgcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778404             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903594), ncRNA.
ACCESSION   XR_011778404
VERSION     XR_011778404.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903594"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903594"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903594"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903594"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaacaac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778405             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903595), ncRNA.
ACCESSION   XR_011778405
VERSION     XR_011778405.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903595"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903595"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903595"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903595"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaacaaa tttccaaatc tagtccacgc ctcatataga
       61 gtttcattcg gcttctgtgt gaacgtaaaa atttctcctt gaagtct
//
LOCUS       XR_011778406             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903596), ncRNA.
ACCESSION   XR_011778406
VERSION     XR_011778406.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903596"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903596"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903596"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903596"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778407             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903597), ncRNA.
ACCESSION   XR_011778407
VERSION     XR_011778407.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903597"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903597"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903597"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903597"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatatgga
       61 gtttcatttg gcttctgtgt gaacgtaaaa atttctcctt gaagtct
//
LOCUS       XR_011778408             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903598), ncRNA.
ACCESSION   XR_011778408
VERSION     XR_011778408.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903598"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903598"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903598"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903598"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778409             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903599), ncRNA.
ACCESSION   XR_011778409
VERSION     XR_011778409.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903599"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903599"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903599"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903599"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaatatgtt gaggacatcc tctcaacaac tttccaaatc ttgcccacgc ctcatataga
       61 gtttcatttg tcttttgcat aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778410             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903600), ncRNA.
ACCESSION   XR_011778410
VERSION     XR_011778410.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903600"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903600"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903600"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903600"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataaa tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778411             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903601), ncRNA.
ACCESSION   XR_011778411
VERSION     XR_011778411.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903601"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903601"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903601"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903601"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcatg gttttgaatc actcccatgc agtgtaaaga
       61 gattcatcat aactttgttt aaatttaatg atgtcattct ttagttt
//
LOCUS       XR_011778412             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903602), ncRNA.
ACCESSION   XR_011778412
VERSION     XR_011778412.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903602"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903602"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903602"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903602"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttactaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttttgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778413             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903603), ncRNA.
ACCESSION   XR_011778413
VERSION     XR_011778413.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903603"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903603"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903603"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903603"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactgatgat tagggaattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct tgagtt
//
LOCUS       XR_011778414             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903604), ncRNA.
ACCESSION   XR_011778414
VERSION     XR_011778414.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903604"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903604"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903604"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903604"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcattag gtttctgtgt aaatgtaaca atttctgctt gaagtct
//
LOCUS       XR_011778415             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903605), ncRNA.
ACCESSION   XR_011778415
VERSION     XR_011778415.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903605"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903605"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903605"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903605"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgt ctcatataac
       61 gtttcatttg gcttttgcac gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778416             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903606), ncRNA.
ACCESSION   XR_011778416
VERSION     XR_011778416.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903606"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903606"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903606"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903606"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc tggtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttcttctt gaagtct
//
LOCUS       XR_011778417             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903607), ncRNA.
ACCESSION   XR_011778417
VERSION     XR_011778417.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903607"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903607"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903607"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903607"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccacgc ttcatataga
       61 ttttcatatg gcttttgtgt gaaagtaaca atttctcctt gaagtct
//
LOCUS       XR_011778418             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903608), ncRNA.
ACCESSION   XR_011778418
VERSION     XR_011778418.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903608"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903608"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903608"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903608"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcga gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778419             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903609), ncRNA.
ACCESSION   XR_011778419
VERSION     XR_011778419.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903609"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903609"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903609"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903609"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaacaat tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778420             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903610), ncRNA.
ACCESSION   XR_011778420
VERSION     XR_011778420.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903610"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903610"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903610"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903610"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac cttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778421             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903611), ncRNA.
ACCESSION   XR_011778421
VERSION     XR_011778421.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903611"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903611"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903611"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903611"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gcggacatcc tctcaataac tttccaaatc ttgtccatgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778422             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903612), ncRNA.
ACCESSION   XR_011778422
VERSION     XR_011778422.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903612"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903612"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903612"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903612"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agctggtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattcc ttagttt
//
LOCUS       XR_011778423             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903613), ncRNA.
ACCESSION   XR_011778423
VERSION     XR_011778423.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903613"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903613"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903613"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903613"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ttcatataga
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctactt gaagtct
//
LOCUS       XR_011778424             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903614), ncRNA.
ACCESSION   XR_011778424
VERSION     XR_011778424.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903614"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903614"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903614"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903614"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778425             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903615), ncRNA.
ACCESSION   XR_011778425
VERSION     XR_011778425.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903615"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903615"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903615"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903615"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt gaatgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778426             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903616), ncRNA.
ACCESSION   XR_011778426
VERSION     XR_011778426.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903616"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903616"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903616"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903616"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcaaataaa
       61 gtttcattcg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778427             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903617), ncRNA.
ACCESSION   XR_011778427
VERSION     XR_011778427.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903617"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903617"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903617"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903617"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccacgc ttcaaataat
       61 gtttcatttg gctgttgtac gaacgtggca atttatcctt gaagtct
//
LOCUS       XR_011778428             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903618), ncRNA.
ACCESSION   XR_011778428
VERSION     XR_011778428.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903618"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903618"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903618"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903618"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatac tctcaataac tttccaaatc ttgtccacgc ctcatataaa
       61 gtttcatttg gcttttgcgt gaacataaca atttctcctt gaagtct
//
LOCUS       XR_011778429             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903619), ncRNA.
ACCESSION   XR_011778429
VERSION     XR_011778429.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903619"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903619"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903619"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903619"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttctaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gctattgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778430             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903620), ncRNA.
ACCESSION   XR_011778430
VERSION     XR_011778430.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903620"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903620"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903620"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903620"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778431             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903621), ncRNA.
ACCESSION   XR_011778431
VERSION     XR_011778431.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903621"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903621"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903621"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903621"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778432             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903622), ncRNA.
ACCESSION   XR_011778432
VERSION     XR_011778432.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903622"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903622"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903622"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903622"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778433             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903623), ncRNA.
ACCESSION   XR_011778433
VERSION     XR_011778433.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903623"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903623"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903623"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903623"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778434             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903624), ncRNA.
ACCESSION   XR_011778434
VERSION     XR_011778434.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903624"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903624"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903624"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903624"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttttgtgt gaacgtaata atttctcctt gaagtct
//
LOCUS       XR_011778435             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903625), ncRNA.
ACCESSION   XR_011778435
VERSION     XR_011778435.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903625"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903625"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903625"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903625"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatca tcttaataac ttttcaaatc tagtccacgc ctcatataga
       61 gtttcatttg gtttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778436             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903626), ncRNA.
ACCESSION   XR_011778436
VERSION     XR_011778436.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903626"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903626"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903626"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903626"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778437             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903627), ncRNA.
ACCESSION   XR_011778437
VERSION     XR_011778437.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903627"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903627"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903627"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903627"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttccgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778438             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903628), ncRNA.
ACCESSION   XR_011778438
VERSION     XR_011778438.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903628"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903628"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903628"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903628"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccatac ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778439             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903629), ncRNA.
ACCESSION   XR_011778439
VERSION     XR_011778439.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903629"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903629"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903629"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903629"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccatgc ctcatataga
       61 gtttcatttg gtttctgtgt aaacgtaaca atttatcctt gaagtct
//
LOCUS       XR_011778440             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903630), ncRNA.
ACCESSION   XR_011778440
VERSION     XR_011778440.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903630"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903630"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903630"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903630"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct tgagtt
//
LOCUS       XR_011778441             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903631), ncRNA.
ACCESSION   XR_011778441
VERSION     XR_011778441.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903631"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903631"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903631"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903631"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcagg gttttgaatc gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt aaagttaatg atgtcattct tgagtt
//
LOCUS       XR_011778442             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903632), ncRNA.
ACCESSION   XR_011778442
VERSION     XR_011778442.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903632"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903632"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903632"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903632"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccatgtt gtggacatcc cctaagcaat tgaccaaatc taacccacgc agaataaagt
       61 gtctcattag atttttgatg aaagttagca aattcatttt gaagggt
//
LOCUS       XR_011778443             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903633), ncRNA.
ACCESSION   XR_011778443
VERSION     XR_011778443.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903633"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903633"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903633"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903633"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gtggacatcc tctcaataac tttccaaatc ttgtccatgc ctcatatata
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778444             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903634), ncRNA.
ACCESSION   XR_011778444
VERSION     XR_011778444.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903634"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903634"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903634"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903634"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aacccgtgtt gaggacatat tcgaagcatt ttattgaatc gggtccaagc ttcataaaga
       61 gtttcattag gcttttgttt aaagtgattt atgtcacttt gtagtt
//
LOCUS       XR_011778445             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903635), ncRNA.
ACCESSION   XR_011778445
VERSION     XR_011778445.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903635"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903635"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903635"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903635"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaataac ttttcgaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttttgcgc gaaagtaaca atttctcctt gaagtct
//
LOCUS       XR_011778446             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903636), ncRNA.
ACCESSION   XR_011778446
VERSION     XR_011778446.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903636"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903636"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903636"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903636"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agacggtggt tcgggcatct tcgaagcaaa tgtttgaatc tttcccatgc agtgtagagt
       61 gattcatcgt atgcttgttg aaagtttacg atatcattcc taagtct
//
LOCUS       XR_011778447             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903637), ncRNA.
ACCESSION   XR_011778447
VERSION     XR_011778447.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903637"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903637"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903637"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903637"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778448             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903638), ncRNA.
ACCESSION   XR_011778448
VERSION     XR_011778448.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903638"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903638"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903638"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903638"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaacaac tttccaaatc ttgtccatgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778449             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903640), ncRNA.
ACCESSION   XR_011778449
VERSION     XR_011778449.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903640"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903640"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903640"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903640"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac ttttcaaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778450             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903641), ncRNA.
ACCESSION   XR_011778450
VERSION     XR_011778450.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903641"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903641"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903641"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903641"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccaagc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778451             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903642), ncRNA.
ACCESSION   XR_011778451
VERSION     XR_011778451.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903642"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903642"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903642"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903642"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac ttttcaaatc ttgtccaagc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778452             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903643), ncRNA.
ACCESSION   XR_011778452
VERSION     XR_011778452.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903643"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903643"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903643"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903643"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacaac tttccaaatc ttgtccacgc ctcatataga
       61 gtttcatttg acttttgtgt gaacgtaaaa atttctcctt gaagtct
//
LOCUS       XR_011778453             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903644), ncRNA.
ACCESSION   XR_011778453
VERSION     XR_011778453.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903644"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903644"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903644"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903644"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaacaac tttccaaatc ttgtccatgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778454             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903645), ncRNA.
ACCESSION   XR_011778454
VERSION     XR_011778454.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903645"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903645"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903645"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903645"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaacaac tttccaaatc ttgtccatgc ctcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778455             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903646), ncRNA.
ACCESSION   XR_011778455
VERSION     XR_011778455.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903646"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903646"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903646"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903646"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttctaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778456             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903647), ncRNA.
ACCESSION   XR_011778456
VERSION     XR_011778456.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903647"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903647"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903647"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903647"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttctaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778457             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903648), ncRNA.
ACCESSION   XR_011778457
VERSION     XR_011778457.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903648"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903648"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903648"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903648"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tcttaataac tttctaaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778458             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903649), ncRNA.
ACCESSION   XR_011778458
VERSION     XR_011778458.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903649"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903649"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903649"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903649"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac tttccaaatc ttgtccacgc ttcatataaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778459             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903650), ncRNA.
ACCESSION   XR_011778459
VERSION     XR_011778459.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903650"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903650"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903650"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903650"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gaggacatcc tctcaacaat ttttcgaatc ttgtccacgc ctcatataga
       61 gtttcatttg acttttgcgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778460             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903651), ncRNA.
ACCESSION   XR_011778460
VERSION     XR_011778460.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903651"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903651"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903651"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903651"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgttcg gtgggcaatc tcttagtagc ttcttgaatc gtacccacgc atcatacaga
       61 ctctcatcac cccgatgggt gaacccatta atatccattc taagtcg
//
LOCUS       XR_011778461             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903652), ncRNA.
ACCESSION   XR_011778461
VERSION     XR_011778461.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903652"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903652"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903652"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903652"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcactt cttcagcagg gttttgaaac actcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778462             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903653), ncRNA.
ACCESSION   XR_011778462
VERSION     XR_011778462.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903653"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903653"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903653"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903653"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgcg gtgggcaaac tcttaacatt ttcttgaatc gtacccacgc atcatacaaa
       61 gattcatcac cccattgggt gaacccatta atctccattc gaagtcg
//
LOCUS       XR_011778463             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903654), ncRNA.
ACCESSION   XR_011778463
VERSION     XR_011778463.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903654"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903654"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903654"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903654"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agttggtgat tagggcattt cgtcagcagg gttttgaaac gctctcatgc agtgtaaaga
       61 gattcatcat aactttgttt gaagttaatg atgtcattct tcagttt
//
LOCUS       XR_011778464             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903656), ncRNA.
ACCESSION   XR_011778464
VERSION     XR_011778464.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903656"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903656"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903656"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903656"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataga
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagact
//
LOCUS       XR_011778465             109 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA Z103
            (LOC139903657), ncRNA.
ACCESSION   XR_011778465
VERSION     XR_011778465.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..109
                     /gene="LOC139903657"
                     /note="small nucleolar RNA Z103; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903657"
     ncRNA           1..109
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903657"
                     /product="small nucleolar RNA Z103"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00149"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903657"
                     /db_xref="RFAM:RF00149"
ORIGIN      
        1 ttggaagtga tgattatttc cccagatgat cgaagttgat tatactgagc gcaattattt
       61 aaattctctt tgtttattag agagaatcca agccagaaat ctgatccaa
//
LOCUS       XR_011778466             105 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA Z103
            (LOC139903658), ncRNA.
ACCESSION   XR_011778466
VERSION     XR_011778466.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..105
                     /gene="LOC139903658"
                     /note="small nucleolar RNA Z103; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903658"
     ncRNA           1..105
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903658"
                     /product="small nucleolar RNA Z103"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00149"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903658"
                     /db_xref="RFAM:RF00149"
ORIGIN      
        1 atggatatga tgattatttc cccagatgat cgaatctgaa ataactgagc gctctattta
       61 ttttttctcc ttcgggagaa aattcaagcc agaaatctga tcctt
//
LOCUS       XR_011778467              90 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA Z159/U59
            (LOC139903659), ncRNA.
ACCESSION   XR_011778467
VERSION     XR_011778467.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..90
                     /gene="LOC139903659"
                     /note="small nucleolar RNA Z159/U59; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903659"
     ncRNA           1..90
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903659"
                     /product="small nucleolar RNA Z159/U59"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00160"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903659"
                     /db_xref="RFAM:RF00160"
ORIGIN      
        1 gcttcttatg atgatcaaaa ctaataactt tcgttcttct gaggattaaa catccatgtg
       61 gaaacaattg gagacctgaa ctgaagaagc
//
LOCUS       XR_011778468              77 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R160
            (LOC139903660), ncRNA.
ACCESSION   XR_011778468
VERSION     XR_011778468.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..77
                     /gene="LOC139903660"
                     /note="small nucleolar RNA R160; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903660"
     ncRNA           1..77
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903660"
                     /product="small nucleolar RNA R160"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00203"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903660"
                     /db_xref="RFAM:RF00203"
ORIGIN      
        1 tgcaaaatga tgagaaactc tactctgaat attaaatgtt gaatcattta tagtaccttc
       61 aaagttctct gattgct
//
LOCUS       XR_011778469              83 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA U54
            (LOC139903661), ncRNA.
ACCESSION   XR_011778469
VERSION     XR_011778469.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..83
                     /gene="LOC139903661"
                     /note="small nucleolar RNA U54; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903661"
     ncRNA           1..83
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903661"
                     /product="small nucleolar RNA U54"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00206"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903661"
                     /db_xref="RFAM:RF00206"
ORIGIN      
        1 agctctatga tcgaatgcca atttttaggc aatatacgct attccgatgt ttaatatgaa
       61 cggaaagaat ttatatgaga gcg
//
LOCUS       XR_011778470              94 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA
            snoR31/Z110/Z27 (LOC139903662), ncRNA.
ACCESSION   XR_011778470
VERSION     XR_011778470.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..94
                     /gene="LOC139903662"
                     /note="small nucleolar RNA snoR31/Z110/Z27; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="GeneID:139903662"
     ncRNA           1..94
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903662"
                     /product="small nucleolar RNA snoR31/Z110/Z27"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00353"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903662"
                     /db_xref="RFAM:RF00353"
ORIGIN      
        1 gttatcatgt gatgataaat caaattaatc ttaggacacc tttggacaca actattttag
       61 ttgtgtatga aaatcaaatt aatctgatga tgac
//
LOCUS       XR_011778471              78 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA snoR28
            (LOC139903663), ncRNA.
ACCESSION   XR_011778471
VERSION     XR_011778471.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..78
                     /gene="LOC139903663"
                     /note="small nucleolar RNA snoR28; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903663"
     ncRNA           1..78
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903663"
                     /product="small nucleolar RNA snoR28"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00355"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903663"
                     /db_xref="RFAM:RF00355"
ORIGIN      
        1 aatgaaggtg acgacgtatt tctatgcgaa tatgagtatg atgtaaaatg gcatagtttt
       61 aagagaattg ctgagatt
//
LOCUS       XR_011778472             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA Z107/R87
            (LOC139903664), ncRNA.
ACCESSION   XR_011778472
VERSION     XR_011778472.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903664"
                     /note="small nucleolar RNA Z107/R87; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903664"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903664"
                     /product="small nucleolar RNA Z107/R87"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00360"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903664"
                     /db_xref="RFAM:RF00360"
ORIGIN      
        1 gatcgcaatg acgacttgca aaattcaagc tcaacagacc ggaatgcagt cttatctctt
       61 tcagagattt gtttgcgtgt cgatattccc gctgaactga gcgatc
//
LOCUS       XR_011778473              89 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA snoR109
            (LOC139903665), ncRNA.
ACCESSION   XR_011778473
VERSION     XR_011778473.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..89
                     /gene="LOC139903665"
                     /note="small nucleolar RNA snoR109; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903665"
     ncRNA           1..89
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903665"
                     /product="small nucleolar RNA snoR109"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01206"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903665"
                     /db_xref="RFAM:RF01206"
ORIGIN      
        1 tggctgtagc tatatttatt cctgaagttt tactggccgg ttgtcgttta tttccgtcga
       61 taaatctgct taccgaactt catacatct
//
LOCUS       XR_011778474             126 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA snoR99
            (LOC139903666), ncRNA.
ACCESSION   XR_011778474
VERSION     XR_011778474.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..126
                     /gene="LOC139903666"
                     /note="small nucleolar RNA snoR99; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903666"
     ncRNA           1..126
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903666"
                     /product="small nucleolar RNA snoR99"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01208"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903666"
                     /db_xref="RFAM:RF01208"
ORIGIN      
        1 ttgctttagg gatggaatta ttatatcccc taatattcaa attcactctc ttcactttgt
       61 cagctacttt attagttttt ataaactagt tttacaagta gctgatcatt tatgagtgac
      121 agattt
//
LOCUS       XR_011778475              97 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA snoR100
            (LOC139903667), ncRNA.
ACCESSION   XR_011778475
VERSION     XR_011778475.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..97
                     /gene="LOC139903667"
                     /note="small nucleolar RNA snoR100; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903667"
     ncRNA           1..97
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903667"
                     /product="small nucleolar RNA snoR100"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01219"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903667"
                     /db_xref="RFAM:RF01219"
ORIGIN      
        1 caatgaaggt agcatggtac tgtgcatgta atgcaagcaa ctaaatatat atacctgata
       61 tgtatctgat ttggggacct ggattagacc tacattt
//
LOCUS       XR_011778476              84 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA snoR35
            (LOC139903668), ncRNA.
ACCESSION   XR_011778476
VERSION     XR_011778476.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..84
                     /gene="LOC139903668"
                     /note="small nucleolar RNA snoR35; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903668"
     ncRNA           1..84
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903668"
                     /product="small nucleolar RNA snoR35"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01281"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903668"
                     /db_xref="RFAM:RF01281"
ORIGIN      
        1 cactgtgctg gaaaacagga gaaggtgcgc cagattgagc agagaaagag gtggaaaaag
       61 gctgtccgga aatattatct tgaa
//
LOCUS       XR_011778477              88 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA snoR8a
            (LOC139903669), ncRNA.
ACCESSION   XR_011778477
VERSION     XR_011778477.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..88
                     /gene="LOC139903669"
                     /note="small nucleolar RNA snoR8a; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903669"
     ncRNA           1..88
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903669"
                     /product="small nucleolar RNA snoR8a"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01284"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903669"
                     /db_xref="RFAM:RF01284"
ORIGIN      
        1 ttggttgcag tgattataaa aaattcctcg tactgaatgc tatattaagc atgacagaca
       61 tctttacacc catagaatat gagcaact
//
LOCUS       XR_011778478              94 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA snoR8a
            (LOC139903670), ncRNA.
ACCESSION   XR_011778478
VERSION     XR_011778478.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..94
                     /gene="LOC139903670"
                     /note="small nucleolar RNA snoR8a; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903670"
     ncRNA           1..94
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903670"
                     /product="small nucleolar RNA snoR8a"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01284"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903670"
                     /db_xref="RFAM:RF01284"
ORIGIN      
        1 tggattgcag tgattataaa caatcaaata ttcataaatc tgaatgcttt taatagcatg
       61 atagactcct ttacacccat agaatatgag catc
//
LOCUS       XR_011778479              89 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA snoR31
            (LOC139903671), ncRNA.
ACCESSION   XR_011778479
VERSION     XR_011778479.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..89
                     /gene="LOC139903671"
                     /note="small nucleolar RNA snoR31; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903671"
     ncRNA           1..89
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903671"
                     /product="small nucleolar RNA snoR31"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01288"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903671"
                     /db_xref="RFAM:RF01288"
ORIGIN      
        1 aagatgatga tgaagcaaat tatgaaaatt caacacttgg actgagaaat ttgttttcaa
       61 gagatgtata tacatgcttc tgagtctta
//
LOCUS       XR_011778480             213 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA U3
            (LOC139903672), ncRNA.
ACCESSION   XR_011778480
VERSION     XR_011778480.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..213
                     /gene="LOC139903672"
                     /note="small nucleolar RNA U3; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903672"
     ncRNA           1..213
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903672"
                     /product="small nucleolar RNA U3"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01847"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903672"
                     /db_xref="RFAM:RF01847"
ORIGIN      
        1 acgaccttac ttgaacagga tctgttctat aggcttgtac ctctgtattc ttgacttcta
       61 agaagacaga aacccttgtc tggttgatga aatatgacca tgtaaccaga gcgtgattaa
      121 cacggctcat ggtccgacca ttgctaagta gatgatcgtt gccaacctat ctccgatggg
      181 ttctggcatg gttacatggt tgtctgacag aca
//
LOCUS       XR_011778481             214 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA U3
            (LOC139903673), ncRNA.
ACCESSION   XR_011778481
VERSION     XR_011778481.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..214
                     /gene="LOC139903673"
                     /note="small nucleolar RNA U3; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903673"
     ncRNA           1..214
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903673"
                     /product="small nucleolar RNA U3"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01847"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903673"
                     /db_xref="RFAM:RF01847"
ORIGIN      
        1 acgaccttac ttgaacagga tctgctctat aggcttgtat ttctgtattc ttgacttcta
       61 agaagacaga aaaccatgtc tggttgatga aatacgacca tgtaaccaga gcgtgattaa
      121 cacggctcat ggttccgacc attgctaagt agatgatcgt tgccaaccca actcttatgt
      181 gttctggcat ggttacatgg ttgtctgaca gaca
//
LOCUS       XR_011778482             218 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA U3
            (LOC139903675), ncRNA.
ACCESSION   XR_011778482
VERSION     XR_011778482.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..218
                     /gene="LOC139903675"
                     /note="small nucleolar RNA U3; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903675"
     ncRNA           1..218
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903675"
                     /product="small nucleolar RNA U3"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF01847"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903675"
                     /db_xref="RFAM:RF01847"
ORIGIN      
        1 acaatcaaac atattccgca tatcaattgt taacacgtac ctctgtattc ttcttgattc
       61 ctaaaaagac agaaaaaccc atgtttggtt gattaactat gaccatgtag ccagagcgtg
      121 attaacacaa ccttatggtt ctgaccatgg ttgagtagag gatcgtcgcc agcccatgta
      181 atgggtattg gcatggctac atggttgtct gacaaata
//
LOCUS       XR_011778483              87 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA SNOR75
            (LOC139903677), ncRNA.
ACCESSION   XR_011778483
VERSION     XR_011778483.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..87
                     /gene="LOC139903677"
                     /note="small nucleolar RNA SNOR75; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903677"
     ncRNA           1..87
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903677"
                     /product="small nucleolar RNA SNOR75"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF02539"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903677"
                     /db_xref="RFAM:RF02539"
ORIGIN      
        1 tctcggtgat gatttcaaat agatgacgag tctgagaaat ccattcaatc aaatatgagg
       61 actattcgag gcatttgtct gagagaa
//
LOCUS       XR_011778484              82 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA SNOR75
            (LOC139903678), ncRNA.
ACCESSION   XR_011778484
VERSION     XR_011778484.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..82
                     /gene="LOC139903678"
                     /note="small nucleolar RNA SNOR75; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903678"
     ncRNA           1..82
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903678"
                     /product="small nucleolar RNA SNOR75"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF02539"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903678"
                     /db_xref="RFAM:RF02539"
ORIGIN      
        1 tctcagtgat gatttcatat agatgacgag tctgagaaat ccattaaata tgaggactat
       61 tcgaggcatt tgtctgagag aa
//
LOCUS       XR_011778485             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903680), ncRNA.
ACCESSION   XR_011778485
VERSION     XR_011778485.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903680"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903680"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903680"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903680"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 ttacttacct ggatggggtc aatgggtgat caagaatgcc catggcctag gttagtgacc
       61 ttcattgcac tttgaagggg tgctatccta aggtcggctc tagtagtcga gcctacatca
      121 taatttgtgg cagtaggggc ctgcgttcgc gcggcccctt c
//
LOCUS       XR_011778486             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903681), ncRNA.
ACCESSION   XR_011778486
VERSION     XR_011778486.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903681"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903681"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903681"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903681"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 tcacttacct ggacgagatc aatggacgat caagaaggtc catggtctag gttggtgact
       61 tccattgcac tttggagggg tgctaaccta aggtcggccc aagtggtcga gcctacgtca
      121 taatttgtgg cagtgggggc ttgcgttcgc gcagcccctg c
//
LOCUS       XR_011778487             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903682), ncRNA.
ACCESSION   XR_011778487
VERSION     XR_011778487.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903682"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903682"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903682"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903682"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 tcacttacct ggacgaggtc gatggacgat caagaaggtc catggcctag gttggtgact
       61 tccattgcac tttggagggg tgccagccta aggtcggccc aagtggtcga gcctacgtca
      121 taatttgtgg tagtgggggc ttgcgttcgc gcagcccctg c
//
LOCUS       XR_011778488             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903683), ncRNA.
ACCESSION   XR_011778488
VERSION     XR_011778488.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903683"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903683"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903683"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903683"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 tcacttacct ggacgaggtc aatggacgat caagaaggtc catggcttag gttggtgact
       61 tccattgcac tttggagggg tgccatccta aggtcggcct aagtggtcga gcctacgtca
      121 taatttgtgg tagtcggggc ttgcgttcgc gcagcccctg c
//
LOCUS       XR_011778489             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903684), ncRNA.
ACCESSION   XR_011778489
VERSION     XR_011778489.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903684"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903684"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903684"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903684"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 gcacttacct ggacgaggtc aatggacgat caagaagatc catggcctag gttggtgact
       61 ttcattgcac tttgaagggg tgctagccta aggtcggccc aagtggttga gcctacgtca
      121 taatttgtgg cagtgggggc ttgcgttcgc gcagcccctg c
//
LOCUS       XR_011778490             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903685), ncRNA.
ACCESSION   XR_011778490
VERSION     XR_011778490.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903685"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903685"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903685"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903685"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 gtacttacct ggacgaagtc aatggacgat caacaaggtc tatggcttag gttggtgact
       61 tccattgcac tttggagggg tgccagccta aggtcggccc aagtggttga gtctacgtca
      121 taatttgtgg tagtgggggc ttgcgttcgc gcagcccctg c
//
LOCUS       XR_011778491             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903686), ncRNA.
ACCESSION   XR_011778491
VERSION     XR_011778491.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903686"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903686"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903686"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903686"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 tcacttacct ggacgaggtc aatggatgat caagaaggtc catggcctag gttggtgact
       61 ttcattgcac tttggagggg cgtcagccta aggtcggtcc aagtggtcga gcttacgtca
      121 taatttgtgg cagtgggggc ttgcgttcgc gcagccccta c
//
LOCUS       XR_011778492             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903687), ncRNA.
ACCESSION   XR_011778492
VERSION     XR_011778492.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903687"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903687"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903687"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903687"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 atacttacct ggactaagtc aatggacaat catgaaggtc catggcttag gttggtgact
       61 tccattgcac tttggagggg tgccagccta agctcggccc aagtggtcga gcctaggtca
      121 taatttgtgg tagtgggggc ttgcgttcgc gcagcccctg c
//
LOCUS       XR_011778493             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903688), ncRNA.
ACCESSION   XR_011778493
VERSION     XR_011778493.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903688"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903688"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903688"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903688"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 gtacttacct ggacgaagtc aatggtcgat caagaaggtc tatggcttag gttggtgact
       61 tccgttgcac tttggagggg tgccagccta aggtcggccc aagtggtcga gcctacgtca
      121 taatttatgg cagtgggggc ttgcgttcgc gcaacccctg t
//
LOCUS       XR_011778494             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903689), ncRNA.
ACCESSION   XR_011778494
VERSION     XR_011778494.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903689"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903689"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903689"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903689"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 ttacttacct ggacgagctc aatggacgat caagaaggtt catggcttag gttggtgatc
       61 gtcattgcac tttggagggg tgctaaccta aggtcggccc aatgggtcga gcctacgtca
      121 taatttgtgg cagtgggggc ttgcgttcgc gcagccccta c
//
LOCUS       XR_011778495             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903690), ncRNA.
ACCESSION   XR_011778495
VERSION     XR_011778495.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903690"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903690"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903690"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903690"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 gtacttacct ggacgaagtc aatggacgat caagaaggtc catggcttag gttggtgact
       61 tccattgcac tttggaggcg tgctaaccta aggtcggcac aagtggtcga gcctacgtca
      121 taatttgtgg cagtgggggc ttgcgttcgc gcagcctcta c
//
LOCUS       XR_011778496             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903691), ncRNA.
ACCESSION   XR_011778496
VERSION     XR_011778496.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903691"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903691"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903691"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903691"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 gtacttacct ggacgaagtc aacgggtgat caagaaggtc catggcttag gttggtgact
       61 tccattgcac cttggaggct tgctaactta aggttggcac aagtggttga gcctacgtca
      121 taatttgtgg cagtgggggc ttgcgtttgc gcagcctctc c
//
LOCUS       XR_011778497             161 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903692), ncRNA.
ACCESSION   XR_011778497
VERSION     XR_011778497.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..161
                     /gene="LOC139903692"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903692"
     ncRNA           1..161
                     /ncRNA_class="snRNA"
                     /gene="LOC139903692"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903692"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 gtacttacct agacacggtc aatgggccat caagaaggtc catggcctag gctggtgact
       61 ttcattgcac tttgaagggg tgcctgccta aggtcagccc aagtggttga gcctatgtca
      121 ttatttcttc ctgttggggc ttgcgttccc gcagcccctt t
//
LOCUS       XR_011778498             167 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903693), ncRNA.
ACCESSION   XR_011778498
VERSION     XR_011778498.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..167
                     /gene="LOC139903693"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903693"
     ncRNA           1..167
                     /ncRNA_class="snRNA"
                     /gene="LOC139903693"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903693"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 ttacatacct ggacgtggtc tatatgggtg atcaagtagg cctatggcct aggttggtga
       61 cttccattgc acattataac ggaagggtgc tagcctatgg tcgaccttta ggggtcgttc
      121 ctacgtcata atttctggca gtggggattg cgtacgcgcg acccttc
//
LOCUS       XR_011778499             162 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U1 spliceosomal RNA
            (LOC139903694), ncRNA.
ACCESSION   XR_011778499
VERSION     XR_011778499.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..162
                     /gene="LOC139903694"
                     /note="U1 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903694"
     ncRNA           1..162
                     /ncRNA_class="snRNA"
                     /gene="LOC139903694"
                     /product="U1 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00003"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903694"
                     /db_xref="RFAM:RF00003"
ORIGIN      
        1 tcacttacct ggatgaggtc aatggattat caagaaggtc catggcctag gttggtgatt
       61 ttcattacat tttggagggg tgccagtcta aggtcggctc aagtggtcga gtctatgtca
      121 taatttgtgg tagtggggct tgtcatttca attttttttc at
//
LOCUS       XR_011778500             195 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U2 spliceosomal RNA
            (LOC139903696), ncRNA.
ACCESSION   XR_011778500
VERSION     XR_011778500.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..195
                     /gene="LOC139903696"
                     /note="U2 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903696"
     ncRNA           1..195
                     /ncRNA_class="snRNA"
                     /gene="LOC139903696"
                     /product="U2 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00004"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903696"
                     /db_xref="RFAM:RF00004"
ORIGIN      
        1 atacttttct cagccttttg gctaagatca agtatagtat ctattcttat cagtttaata
       61 tctgctatgt gggctatcgg ctcactcgat attaatctta attttttgag ggaagaccca
      121 tcacactagt ttgctagtgg ggcttttcac gtgtcgcctt ggcgttgcac tacatctaga
      181 cctggtgcac ccttc
//
LOCUS       XR_011778501             153 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4 spliceosomal RNA
            (LOC139903698), ncRNA.
ACCESSION   XR_011778501
VERSION     XR_011778501.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..153
                     /gene="LOC139903698"
                     /note="U4 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903698"
     ncRNA           1..153
                     /ncRNA_class="snRNA"
                     /gene="LOC139903698"
                     /product="U4 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00015"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903698"
                     /db_xref="RFAM:RF00015"
ORIGIN      
        1 atctttgcgc ttggggcaat gacgcagcta atgaggtaat aaccgaggcg cgtcaattgc
       61 tggttgaaaa ctatttccaa accccctcct tggctttggg tctcccggag ccatcgagaa
      121 tttctggaag gactcccttc attgggtaaa gtc
//
LOCUS       XR_011778502             154 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4 spliceosomal RNA
            (LOC139903699), ncRNA.
ACCESSION   XR_011778502
VERSION     XR_011778502.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..154
                     /gene="LOC139903699"
                     /note="U4 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903699"
     ncRNA           1..154
                     /ncRNA_class="snRNA"
                     /gene="LOC139903699"
                     /product="U4 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00015"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903699"
                     /db_xref="RFAM:RF00015"
ORIGIN      
        1 atctttgcgc ttggggcaat gacgtagtta atgaggtaat aaccgagacg cgtcaattgc
       61 tggttgaaaa ctatttccaa accccctcct tggctttggg tctcccttgg ccatcgagaa
      121 tttctggaag ggctctcttt taaagagtaa agcc
//
LOCUS       XR_011778503             154 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4 spliceosomal RNA
            (LOC139903700), ncRNA.
ACCESSION   XR_011778503
VERSION     XR_011778503.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..154
                     /gene="LOC139903700"
                     /note="U4 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903700"
     ncRNA           1..154
                     /ncRNA_class="snRNA"
                     /gene="LOC139903700"
                     /product="U4 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00015"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903700"
                     /db_xref="RFAM:RF00015"
ORIGIN      
        1 atctttgcgc ttggggcaat gatgcagtta atgaggtatt aaccgagacg cgtcaattgc
       61 tggttgaaaa ctatttccaa accccctcct tggctttggg tttcccttgg ccatcgagaa
      121 tttctgcaag ggctcccttt ttaagggtaa agcc
//
LOCUS       XR_011778504             151 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4 spliceosomal RNA
            (LOC139903702), ncRNA.
ACCESSION   XR_011778504
VERSION     XR_011778504.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..151
                     /gene="LOC139903702"
                     /note="U4 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903702"
     ncRNA           1..151
                     /ncRNA_class="snRNA"
                     /gene="LOC139903702"
                     /product="U4 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00015"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903702"
                     /db_xref="RFAM:RF00015"
ORIGIN      
        1 atctttgcgc ttggggcaat gatgcagtta atgatgtaat aaccgagacg cgtcaattgc
       61 tggttgaaaa ctatttccaa accccctccc cgctttggct ttgccttggc cgttgagaat
      121 ttctggaagg actccctcat tgggtaaagt c
//
LOCUS       XR_011778505             124 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA SNORD14
            (LOC139903705), ncRNA.
ACCESSION   XR_011778505
VERSION     XR_011778505.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..124
                     /gene="LOC139903705"
                     /note="small nucleolar RNA SNORD14; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903705"
     ncRNA           1..124
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903705"
                     /product="small nucleolar RNA SNORD14"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00016"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903705"
                     /db_xref="RFAM:RF00016"
ORIGIN      
        1 aatcgatgat gataaattga aggcttgttt ctcagagaca ttcgcagtgg ccgcctaaga
       61 actttcgcct ttcgccgggc ttgagagttt atgctgtttt atccttcctt ggatgtctga
      121 gatt
//
LOCUS       XR_011778506             124 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA SNORD14
            (LOC139903706), ncRNA.
ACCESSION   XR_011778506
VERSION     XR_011778506.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..124
                     /gene="LOC139903706"
                     /note="small nucleolar RNA SNORD14; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903706"
     ncRNA           1..124
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903706"
                     /product="small nucleolar RNA SNORD14"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00016"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903706"
                     /db_xref="RFAM:RF00016"
ORIGIN      
        1 aacttgtgat gatgaattga aggcttgttt ctcagagaca ttcgcagtgg ccgcctaaga
       61 tctttcgcct tttgccgggc ttgagagata gtgctgtttt atccttcctt ggatgtctga
      121 agtt
//
LOCUS       XR_011778507             125 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA SNORD14
            (LOC139903707), ncRNA.
ACCESSION   XR_011778507
VERSION     XR_011778507.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..125
                     /gene="LOC139903707"
                     /note="small nucleolar RNA SNORD14; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903707"
     ncRNA           1..125
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903707"
                     /product="small nucleolar RNA SNORD14"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00016"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903707"
                     /db_xref="RFAM:RF00016"
ORIGIN      
        1 tgccgatgat gatagaataa aaggcttgtt tctcagagac attcgcagtg gccgactaag
       61 atctttcgcc tttcgccggg cttgagagat tatgctgttt tatccttcct tggatgtctg
      121 aggca
//
LOCUS       XR_011778508             123 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA SNORD14
            (LOC139903708), ncRNA.
ACCESSION   XR_011778508
VERSION     XR_011778508.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..123
                     /gene="LOC139903708"
                     /note="small nucleolar RNA SNORD14; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903708"
     ncRNA           1..123
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903708"
                     /product="small nucleolar RNA SNORD14"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00016"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903708"
                     /db_xref="RFAM:RF00016"
ORIGIN      
        1 aatcgatgat gatgaatcta agacttgttt ctcagagaca ttcgcagtgg tcgcctaaga
       61 actttcgcct tcgccaggct tgagagttta tgctgcttta tccttccttg gatgtctgag
      121 atc
//
LOCUS       XR_011778509             120 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U5 spliceosomal RNA
            (LOC139903710), ncRNA.
ACCESSION   XR_011778509
VERSION     XR_011778509.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..120
                     /gene="LOC139903710"
                     /note="U5 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903710"
     ncRNA           1..120
                     /ncRNA_class="snRNA"
                     /gene="LOC139903710"
                     /product="U5 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00020"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903710"
                     /db_xref="RFAM:RF00020"
ORIGIN      
        1 agctaggtag tgagcacaaa gcgaactatt ccttcgcctt ttactaaaga ataccgtgtg
       61 ctcattatat ttcactggca tacgcctatt tttgtagagt cccttttgta ttgaaagagc
//
LOCUS       XR_011778510             118 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U5 spliceosomal RNA
            (LOC139903711), ncRNA.
ACCESSION   XR_011778510
VERSION     XR_011778510.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..118
                     /gene="LOC139903711"
                     /note="U5 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903711"
     ncRNA           1..118
                     /ncRNA_class="snRNA"
                     /gene="LOC139903711"
                     /product="U5 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00020"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903711"
                     /db_xref="RFAM:RF00020"
ORIGIN      
        1 tttcacccag gatacccgtg aaccgaacta ttatttcgcc tttcactaaa gaatactata
       61 cctatgctgc tttaagtggc atacgcctat ttttggagag ttaaataaaa tttaaaaa
//
LOCUS       XR_011778511             103 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903712), ncRNA.
ACCESSION   XR_011778511
VERSION     XR_011778511.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..103
                     /gene="LOC139903712"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903712"
     ncRNA           1..103
                     /ncRNA_class="snRNA"
                     /gene="LOC139903712"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903712"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcccttcgg ggacatccga taaaattgga acgatacaga gaagattagc atggcccctg
       61 cgcaaggatg acacgcacaa atcgagaaat ggtccaaatt ttt
//
LOCUS       XR_011778512             103 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903713), ncRNA.
ACCESSION   XR_011778512
VERSION     XR_011778512.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..103
                     /gene="LOC139903713"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903713"
     ncRNA           1..103
                     /ncRNA_class="snRNA"
                     /gene="LOC139903713"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903713"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcccttcgg ggacatccga taaaattgga acgatacaga gaagattagc atggcccctg
       61 cgcaaggatg acacgcacaa atcgagaaat ggtccaaatt ttt
//
LOCUS       XR_011778513             103 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903714), ncRNA.
ACCESSION   XR_011778513
VERSION     XR_011778513.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..103
                     /gene="LOC139903714"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903714"
     ncRNA           1..103
                     /ncRNA_class="snRNA"
                     /gene="LOC139903714"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903714"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcccttcgg ggacatccga taaaattgga acgatacaga gaagattagc atggcccctg
       61 cgcaaggatg acacgcacaa atcgagaaat ggtccaaatt ttt
//
LOCUS       XR_011778514             103 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903715), ncRNA.
ACCESSION   XR_011778514
VERSION     XR_011778514.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..103
                     /gene="LOC139903715"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903715"
     ncRNA           1..103
                     /ncRNA_class="snRNA"
                     /gene="LOC139903715"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903715"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcccttcgg ggacatccga taaaattgga acgatacaga gaagattagc atggcccctg
       61 cgcaaggatg acacgcacaa atcgagaaat ggttcaaatt ttt
//
LOCUS       XR_011778515             103 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903716), ncRNA.
ACCESSION   XR_011778515
VERSION     XR_011778515.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..103
                     /gene="LOC139903716"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903716"
     ncRNA           1..103
                     /ncRNA_class="snRNA"
                     /gene="LOC139903716"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903716"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcccttcgg ggacatccga taaaattgga acgatacaga gaagattagc atggcccctg
       61 cgcaaggatg acacgcacaa atcgagaaat ggttcaaatt ttt
//
LOCUS       XR_011778516             103 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903718), ncRNA.
ACCESSION   XR_011778516
VERSION     XR_011778516.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..103
                     /gene="LOC139903718"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903718"
     ncRNA           1..103
                     /ncRNA_class="snRNA"
                     /gene="LOC139903718"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903718"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcccttcgg ggacatccga taaaattgga aagatacaga gaagattagc atgacccctg
       61 cccaaggatg acacgcacaa atcgagaaat ggtctaaatt ttt
//
LOCUS       XR_011778517             103 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903719), ncRNA.
ACCESSION   XR_011778517
VERSION     XR_011778517.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..103
                     /gene="LOC139903719"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903719"
     ncRNA           1..103
                     /ncRNA_class="snRNA"
                     /gene="LOC139903719"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903719"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcccttcgg ggacatccga tcaaattgga acgatacata gaagattagc atggcccctg
       61 tgcaaggatg acacgcacaa atcgagaaat tgtccaaatt ttt
//
LOCUS       XR_011778518             102 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903720), ncRNA.
ACCESSION   XR_011778518
VERSION     XR_011778518.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..102
                     /gene="LOC139903720"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903720"
     ncRNA           1..102
                     /ncRNA_class="snRNA"
                     /gene="LOC139903720"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903720"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcgcttcgg ggacatctga taaaattgga acgatacaga gaagattagc atgcccctgt
       61 gcaaggatga cacgcataag tcgagaaatg atccaaattt at
//
LOCUS       XR_011778519             102 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903721), ncRNA.
ACCESSION   XR_011778519
VERSION     XR_011778519.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..102
                     /gene="LOC139903721"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903721"
     ncRNA           1..102
                     /ncRNA_class="snRNA"
                     /gene="LOC139903721"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903721"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcgcttcgg ggacatctga taaaattgga acgatacaga gaagattagc atgcccctgt
       61 gcaaggatga cacgcataag tcgagaaatg atccaaattt at
//
LOCUS       XR_011778520              99 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903722), ncRNA.
ACCESSION   XR_011778520
VERSION     XR_011778520.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..99
                     /gene="LOC139903722"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903722"
     ncRNA           1..99
                     /ncRNA_class="snRNA"
                     /gene="LOC139903722"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903722"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 ttggtatcat acccgataaa attggaacga tacagagaag attagcatgg cccctgcgca
       61 aggatgacac gcacaaatcg agaaatggtc caaattttt
//
LOCUS       XR_011778521             100 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903724), ncRNA.
ACCESSION   XR_011778521
VERSION     XR_011778521.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..100
                     /gene="LOC139903724"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903724"
     ncRNA           1..100
                     /ncRNA_class="snRNA"
                     /gene="LOC139903724"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903724"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcctttcgg ggacatccga tcaaattaga atgatacaga gaacattagc gtggccttgc
       61 gtaagaacga cacacaaatt aagactgcca taagttttct
//
LOCUS       XR_011778522              99 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U6 spliceosomal RNA
            (LOC139903725), ncRNA.
ACCESSION   XR_011778522
VERSION     XR_011778522.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..99
                     /gene="LOC139903725"
                     /note="U6 spliceosomal RNA; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903725"
     ncRNA           1..99
                     /ncRNA_class="snRNA"
                     /gene="LOC139903725"
                     /product="U6 spliceosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00026"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903725"
                     /db_xref="RFAM:RF00026"
ORIGIN      
        1 gtcatgtcga catcctaaaa attgaatcga tacatagatg attagcacga cccatgcgca
       61 aggatgacac gcacaagtcg ataaatagtc caaagaatt
//
LOCUS       XR_011778523             102 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R30/Z108
            (LOC139903728), ncRNA.
ACCESSION   XR_011778523
VERSION     XR_011778523.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..102
                     /gene="LOC139903728"
                     /note="small nucleolar RNA R30/Z108; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903728"
     ncRNA           1..102
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903728"
                     /product="small nucleolar RNA R30/Z108"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00046"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903728"
                     /db_xref="RFAM:RF00046"
ORIGIN      
        1 aaggattacg atgaggataa aaagctccct cttctgaata aaatctgaag aaatcctgct
       61 ggcagaatcg aacctaatta acatttaatg ccatctgagt ta
//
LOCUS       XR_011778524             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903729), ncRNA.
ACCESSION   XR_011778524
VERSION     XR_011778524.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903729"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903729"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903729"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903729"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccatgtt gcggacaatt tcgtaacatt ctttttaatc tttcccaggc atcataaaga
       61 gtttcatctg ccttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778525             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903730), ncRNA.
ACCESSION   XR_011778525
VERSION     XR_011778525.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903730"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903730"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903730"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903730"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccatgtt gcggacaatt tcataacatt ctttttaatc tttcccaggc atcataaaga
       61 gtttcatccg ccttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778526             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903731), ncRNA.
ACCESSION   XR_011778526
VERSION     XR_011778526.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903731"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903731"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903731"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903731"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcttaacatt ctttttaatc tttctcatgc atcataaaga
       61 gtttcatccg ccttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778527             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903732), ncRNA.
ACCESSION   XR_011778527
VERSION     XR_011778527.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903732"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903732"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903732"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903732"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatccg ctttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778528             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903733), ncRNA.
ACCESSION   XR_011778528
VERSION     XR_011778528.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903733"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903733"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903733"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903733"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatctgtgtt gcggaaaatt ttgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatccg ccttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778529             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903734), ncRNA.
ACCESSION   XR_011778529
VERSION     XR_011778529.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903734"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903734"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903734"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903734"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt ttgtaacatt ctttttaatc tttcccaggc atcataaaga
       61 gtttcatccg ccttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778530             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903735), ncRNA.
ACCESSION   XR_011778530
VERSION     XR_011778530.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903735"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903735"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903735"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903735"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatctgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcaaccg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778531             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903736), ncRNA.
ACCESSION   XR_011778531
VERSION     XR_011778531.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903736"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903736"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903736"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903736"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778532             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903737), ncRNA.
ACCESSION   XR_011778532
VERSION     XR_011778532.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903737"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903737"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903737"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903737"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778533             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903738), ncRNA.
ACCESSION   XR_011778533
VERSION     XR_011778533.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903738"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903738"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903738"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903738"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778534             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903739), ncRNA.
ACCESSION   XR_011778534
VERSION     XR_011778534.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903739"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903739"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903739"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903739"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778535             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903740), ncRNA.
ACCESSION   XR_011778535
VERSION     XR_011778535.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903740"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903740"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903740"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903740"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcataacatt ctttttaatc tttaccatgc atcataaaga
       61 gtttcatccg ccttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778536             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903741), ncRNA.
ACCESSION   XR_011778536
VERSION     XR_011778536.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903741"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903741"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903741"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903741"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aattcgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatccg ccttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778537             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903742), ncRNA.
ACCESSION   XR_011778537
VERSION     XR_011778537.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903742"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903742"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903742"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903742"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttctcatgc atcataaaga
       61 gtttcatctg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778538             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903743), ncRNA.
ACCESSION   XR_011778538
VERSION     XR_011778538.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903743"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903743"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903743"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903743"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcgtccg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778539             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903744), ncRNA.
ACCESSION   XR_011778539
VERSION     XR_011778539.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903744"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903744"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903744"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903744"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcgtccg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778540             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903745), ncRNA.
ACCESSION   XR_011778540
VERSION     XR_011778540.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903745"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903745"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903745"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903745"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcacatgc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778541             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903746), ncRNA.
ACCESSION   XR_011778541
VERSION     XR_011778541.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903746"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903746"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903746"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903746"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt atttttaatc tttcctatgc atcataaaga
       61 gtttcatccg acttttgttt aaaaatggtg atttcagttc taagtct
//
LOCUS       XR_011778542             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903747), ncRNA.
ACCESSION   XR_011778542
VERSION     XR_011778542.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903747"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903747"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903747"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903747"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt cttttttatc tttcccatgc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagttt
//
LOCUS       XR_011778543             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903749), ncRNA.
ACCESSION   XR_011778543
VERSION     XR_011778543.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903749"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903749"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903749"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903749"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccaggc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagcct
//
LOCUS       XR_011778544             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903750), ncRNA.
ACCESSION   XR_011778544
VERSION     XR_011778544.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903750"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903750"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903750"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903750"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccaggc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagcct
//
LOCUS       XR_011778545             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903751), ncRNA.
ACCESSION   XR_011778545
VERSION     XR_011778545.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903751"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903751"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903751"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903751"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccgtgtt gcggacaatt tcgtaacatt ctttttaatc tttcccaggc atcataaaga
       61 gtttcatccg acttttgttt aaaagtggtg atttcagttc taagcct
//
LOCUS       XR_011778546             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903752), ncRNA.
ACCESSION   XR_011778546
VERSION     XR_011778546.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903752"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903752"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903752"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903752"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtgggcaagc tcttagtagc ttcttgaatc gaacccatgc atcatacaaa
       61 ctctcatcac cctattgtgt gaacccatta atctccattc taagtcg
//
LOCUS       XR_011778547             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903753), ncRNA.
ACCESSION   XR_011778547
VERSION     XR_011778547.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903753"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903753"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903753"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903753"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatccatgtt gcataaaatt tcgtaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatctg acttttgttt aaaagtggtg atttcggttc taagcct
//
LOCUS       XR_011778548             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903754), ncRNA.
ACCESSION   XR_011778548
VERSION     XR_011778548.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903754"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903754"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903754"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903754"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaactgtgcg gtgggcaagc tcttagtagc ttcttgaatc gtacccatgc atcatacaaa
       61 ctctcatcac cccgttgggt gaacccatta atctccattc taagttg
//
LOCUS       XR_011778549             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903755), ncRNA.
ACCESSION   XR_011778549
VERSION     XR_011778549.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903755"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903755"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903755"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903755"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtgggcaagc tcttagtagc ttcttgaatt gtacccatgc atcatacaaa
       61 ctctcatcac cccgttgtgt gaacccatta atctccattc taagccg
//
LOCUS       XR_011778550             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903756), ncRNA.
ACCESSION   XR_011778550
VERSION     XR_011778550.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903756"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903756"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903756"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903756"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtg gtgggcaagc tcttagtagc ttcttgaatc gaatccatgc atcatacaaa
       61 ctctcatcac ccagttgtgt aaacccatta atctccattt taagccg
//
LOCUS       XR_011778551             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903757), ncRNA.
ACCESSION   XR_011778551
VERSION     XR_011778551.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903757"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903757"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903757"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903757"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaagtatgaa ctgtcatgtc ttctaacatt ctttttaatc tttcccatgc atcataaaga
       61 gtttcatccg ccttttgttt aaaagtggtg atttcagttc taagtct
//
LOCUS       XR_011778552             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903758), ncRNA.
ACCESSION   XR_011778552
VERSION     XR_011778552.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903758"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903758"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903758"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903758"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtg gtgggcaagc tcttagtagc ttcttaaatc gtactcatgc atcatacaaa
       61 ctctcatcaa cccattgtgt gaacccatta atctccattc taagtcg
//
LOCUS       XR_011778553             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903759), ncRNA.
ACCESSION   XR_011778553
VERSION     XR_011778553.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903759"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903759"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903759"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903759"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacata tttccgaatc ttgtccatgc ctcaaataac
       61 atttcatttg gcttttgtga gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778554             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903760), ncRNA.
ACCESSION   XR_011778554
VERSION     XR_011778554.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903760"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903760"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903760"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903760"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtggtcaagc tcttagaagc ttcttgaatc gtacccacgc atcatacaaa
       61 ctctcatcac cccgttgggt gaacccatta atctccattc taagtcg
//
LOCUS       XR_011778555             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903761), ncRNA.
ACCESSION   XR_011778555
VERSION     XR_011778555.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903761"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903761"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903761"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903761"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agtccatgtt gtggacagtt tcgtagcatt ctttttaacc tctgcaaagc atcgtataga
       61 ctttcatcct atttttgttt aaaaatggtt atctcggatc taagtct
//
LOCUS       XR_011778556             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903762), ncRNA.
ACCESSION   XR_011778556
VERSION     XR_011778556.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903762"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903762"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903762"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903762"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt tttcagcaag gttttgaaac gctcccatgc agtgtaaaga
       61 gattcatcat aactttgttt gaaattaatg atgtcattct tcagttt
//
LOCUS       XR_011778557             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903763), ncRNA.
ACCESSION   XR_011778557
VERSION     XR_011778557.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903763"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903763"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903763"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903763"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtg gtgggcaagc tcgtagcatc ttcttgaaac gtacacatgc atcatacaaa
       61 gactcatcac tccgttgagt gaatccatta atttccaatc taagtcg
//
LOCUS       XR_011778558             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903765), ncRNA.
ACCESSION   XR_011778558
VERSION     XR_011778558.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903765"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903765"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903765"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903765"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtgggcaagc tcttagtagc ttcttgaatc gtactcatgc atcatacaaa
       61 cgctcatcac cccgttgtgt gaacccatta atctccattc taagccg
//
LOCUS       XR_011778559             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903766), ncRNA.
ACCESSION   XR_011778559
VERSION     XR_011778559.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903766"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903766"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903766"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903766"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccatgtt gaggacatcc tctcaacatt tttccaaatc ttatccatgc ctcatataac
       61 gtttcaattg gcttttgtgc gaacatggaa atttctcctt gaagtct
//
LOCUS       XR_011778560             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903767), ncRNA.
ACCESSION   XR_011778560
VERSION     XR_011778560.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903767"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903767"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903767"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903767"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778561             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903768), ncRNA.
ACCESSION   XR_011778561
VERSION     XR_011778561.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903768"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903768"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903768"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903768"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgcg gtgggcaagc tcttagtagc ttcttgaatc gtacacatgc atcatacaaa
       61 ctctcgtcac cccgttgtgt gaacccatta atctccattc taagccg
//
LOCUS       XR_011778562             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903769), ncRNA.
ACCESSION   XR_011778562
VERSION     XR_011778562.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903769"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903769"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903769"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903769"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccatgtt gaggacatcc tctcaacatt ttttcgaacc ttgtccatgc ctcatataac
       61 atttcatttg gcttttgtgc gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778563             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903770), ncRNA.
ACCESSION   XR_011778563
VERSION     XR_011778563.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903770"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903770"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903770"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903770"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc ctttcgaatc ttgtccatgc ttcatataac
       61 gtttcattta gcttttgcat gaacgtggca atttctcctt gaagtct
//
LOCUS       XR_011778564             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903771), ncRNA.
ACCESSION   XR_011778564
VERSION     XR_011778564.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903771"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903771"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903771"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903771"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgct gaggacatcc tctcaacaac tttctgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaaagtaaca atttctcctt taagtct
//
LOCUS       XR_011778565             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903772), ncRNA.
ACCESSION   XR_011778565
VERSION     XR_011778565.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903772"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903772"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903772"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903772"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc cttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgtac gaacgtggca atttcttctt gaagtct
//
LOCUS       XR_011778566             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903773), ncRNA.
ACCESSION   XR_011778566
VERSION     XR_011778566.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903773"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903773"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903773"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903773"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaac ttttcgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctgctt gaagtct
//
LOCUS       XR_011778567             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903774), ncRNA.
ACCESSION   XR_011778567
VERSION     XR_011778567.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903774"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903774"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903774"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903774"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcaaa gttttgaatc gctcccatgc ggagtaaaga
       61 gattcatcag aactttgttt aaagttaatg atatcattct taagct
//
LOCUS       XR_011778568             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903775), ncRNA.
ACCESSION   XR_011778568
VERSION     XR_011778568.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903775"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903775"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903775"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903775"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aatgaatgat tcggacatct tttaagcatc accttaattc tattccatgc tagacacaat
       61 gactcgtttt cttgttgaaa aaagtttgtg atgtcatttc ttaaact
//
LOCUS       XR_011778569             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903776), ncRNA.
ACCESSION   XR_011778569
VERSION     XR_011778569.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903776"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903776"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903776"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903776"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tcttaacaac ttttcaaatc ttgtccatgc ctcatatagt
       61 gtttcatttg gcttctgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778570             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903777), ncRNA.
ACCESSION   XR_011778570
VERSION     XR_011778570.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903777"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903777"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903777"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903777"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtg gtgggcaagc tcttagcatc ttcttgaaac gtacccatgc atcatacaaa
       61 gtctcatcac cccattgagt gaattcatta atttccatcc taagtcg
//
LOCUS       XR_011778571             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903778), ncRNA.
ACCESSION   XR_011778571
VERSION     XR_011778571.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903778"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903778"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903778"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903778"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgct gaggacatcc tctcaacaac tttctgaatc ttgtccatgc ctcatataat
       61 gtttcatttg gcttttgtgc gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778572             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903779), ncRNA.
ACCESSION   XR_011778572
VERSION     XR_011778572.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903779"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903779"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903779"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903779"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aattcgtgtt gtggacaatt ttgtaacatt ctttttaatc tttcccaggt atcataaaga
       61 gtttcatccg ccttttttta aaagtggtga ttttagttct aagtct
//
LOCUS       XR_011778573             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903781), ncRNA.
ACCESSION   XR_011778573
VERSION     XR_011778573.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903781"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903781"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903781"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903781"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 agaccgtgtt gaggacatcc tctcaacatt tttccgaatc ttgtccatgc ctcatataac
       61 gtttcatttg gcttttgtgc gaatgtggaa atttctcctt gaagtct
//
LOCUS       XR_011778574             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903782), ncRNA.
ACCESSION   XR_011778574
VERSION     XR_011778574.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903782"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903782"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903782"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903782"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaataat ttttcgaatc ttgtccacgc ctcatataat
       61 gtttcatttg gcttttgcgt gaacgtaaca atttctcttt gaagtct
//
LOCUS       XR_011778575             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903783), ncRNA.
ACCESSION   XR_011778575
VERSION     XR_011778575.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903783"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903783"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903783"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903783"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tgtcaacaat tttccaaatc ttgtccatgc ttcatataaa
       61 gtttcattta gcttctgtat gaacataaca atttctcctt gaagtct
//
LOCUS       XR_011778576             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903784), ncRNA.
ACCESSION   XR_011778576
VERSION     XR_011778576.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903784"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903784"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903784"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903784"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacatc tttctgaatc ttgtccacgc ctcaaataac
       61 gtttcatttg gcttttgtac gaatgtggca atttctcctt gaagtct
//
LOCUS       XR_011778577             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903785), ncRNA.
ACCESSION   XR_011778577
VERSION     XR_011778577.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903785"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903785"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903785"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903785"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tatcaacaac tttccgaatc ttgtccatgc ctcatataat
       61 atttcatttg gcttttgtgt gaatgtaaca atttcttctt aaagtct
//
LOCUS       XR_011778578             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903786), ncRNA.
ACCESSION   XR_011778578
VERSION     XR_011778578.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903786"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903786"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903786"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903786"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 taaccgtgcg atgggcaacc tcttaatatt ttcttgaatc atacccacgc atcatacaaa
       61 ctctcatcac ccagttaggt gaatccatta atctccattc taagtca
//
LOCUS       XR_011778579             106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903787), ncRNA.
ACCESSION   XR_011778579
VERSION     XR_011778579.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..106
                     /gene="LOC139903787"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903787"
     ncRNA           1..106
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903787"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903787"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aactggtgat tagggcattt cttcagcaag gttttgaatc gctcccatgc agtgtaaaga
       61 aattcatcat aactttgttt aaagttaatg atatcattct taagtt
//
LOCUS       XR_011778580             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903788), ncRNA.
ACCESSION   XR_011778580
VERSION     XR_011778580.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903788"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903788"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903788"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903788"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccgtgtt gaggacatcc tctcaacatc tttccgaatc ttgtccacgc ctcaaataac
       61 gtttcatttg gcttttgtgt gaacgttgaa atttctcctt gaagtct
//
LOCUS       XR_011778581             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903789), ncRNA.
ACCESSION   XR_011778581
VERSION     XR_011778581.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903789"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903789"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903789"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903789"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacatcc tctcaacaat tttccgaatc ttgcccatgc ctcatataat
       61 gtttcatttg gcttttgcac gaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778582             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903790), ncRNA.
ACCESSION   XR_011778582
VERSION     XR_011778582.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903790"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903790"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903790"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903790"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gaggacattc tcttaacaac ttttcaaatc ttgtccacgc ctcatataaa
       61 gtttcatttg gcttttgtgt aaacgtaaca atttctcctt gaagtct
//
LOCUS       XR_011778583             107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small nucleolar RNA R71
            (LOC139903791), ncRNA.
ACCESSION   XR_011778583
VERSION     XR_011778583.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092335) annotated using gene prediction method: cmsearch.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="3"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..107
                     /gene="LOC139903791"
                     /note="small nucleolar RNA R71; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="GeneID:139903791"
     ncRNA           1..107
                     /ncRNA_class="snoRNA"
                     /gene="LOC139903791"
                     /product="small nucleolar RNA R71"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.10:RF00097"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /db_xref="GeneID:139903791"
                     /db_xref="RFAM:RF00097"
ORIGIN      
        1 aaaccatgtt gcggacatcc tctcaataac ttttcaaatc ttgcccatgc ttcatttaaa
       61 gtttcatttg gcttttgtgt gaacgtaaca atttctcctt gaagtct
//
LOCUS       XM_071885832            1029 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NDR1/HIN1-like protein 13
            (LOC139903906), mRNA.
ACCESSION   XM_071885832
VERSION     XM_071885832.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1029
                     /gene="LOC139903906"
                     /note="NDR1/HIN1-like protein 13; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139903906"
     CDS             132..908
                     /gene="LOC139903906"
                     /codon_start=1
                     /product="NDR1/HIN1-like protein 13"
                     /protein_id="XP_071741933.1"
                     /db_xref="GeneID:139903906"
                     /translation="MAEKIHPSSRQTPTTTAAAAAAAPAAGNGPPPYPANKAQLYNST
                     RPIYRPLPRRNRRSCCCSFCLCITFTIILLIILAAVTGGVFYVIYRPHRPSFTVTSLQ
                     ITQFNLSSSNQLNTKFNFTVTARNPNSKIEFNYDNVFVKFSSNGVTVGNGTIPAFVMP
                     KKNATKLKSIVSTTGQHVDDNSQLKSDLKNKKNLPLTVQLDTKVKVKIGGLKTKKVPI
                     RVVCDGIKVAAPTGKTVTTAVTSGVKCKVDVRFKIWKWTI"
     misc_feature    492..797
                     /gene="LOC139903906"
                     /note="Late embryogenesis abundant protein; Region: LEA_2;
                     pfam03168"
                     /db_xref="CDD:427176"
ORIGIN      
        1 caccttctac cccccaccat ctctgtttgt tacagggttc tattcactcc ctctcctttc
       61 tatttctcta ccatccaact cttttcaata gtaataacat tttttcaaaa ccctaataat
      121 aatttcattc aatggctgaa aaaatccatc cttcgtcaag acaaacccca accaccaccg
      181 ccgccgccgc cgccgccgct cctgcagccg gcaacggtcc accaccgtat ccggcgaaca
      241 aagctcaact ctacaactca acacgtccga tttaccgtcc tctacctcgc cgtaaccgcc
      301 gtagctgctg ctgctctttc tgtctatgca tcaccttcac tatcattctc ctaatcatac
      361 tcgctgccgt caccggcggc gttttctacg tcatataccg tccacatcgg ccgtcgttca
      421 ccgtgacgtc acttcagatc actcagttta atctaagttc atctaatcaa cttaacacta
      481 aattcaattt cactgttact gctcgtaacc ctaactcaaa gatcgagttt aattacgaca
      541 acgtttttgt taagttcagt tctaacggtg taaccgtcgg taacggaaca attccggcgt
      601 tcgtaatgcc gaagaaaaac gcgacgaaat tgaaatcgat cgtgtcaacg accggtcaac
      661 atgttgatga taatagtcaa ttgaaatcag atctgaagaa taaaaagaac ttgccgttga
      721 ctgttcaact tgatacgaaa gtgaaagtga aaattggtgg tttgaagact aaaaaggtgc
      781 cgattagggt tgtttgtgac ggaattaagg tggctgctcc taccggtaaa acggttacta
      841 cggcagttac ttccggtgtg aaatgtaagg tggatgttag gtttaagatc tggaaatgga
      901 ctatttgagt tcataaattt gtgtgattcg atcgttgatt tttatgaatt ttttatttta
      961 ttttattttt ttttttttag gttgtggtga ttggtatgtt tttagtgata atacaaagat
     1021 tatatatat
//
LOCUS       XR_011778584            3980 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X1, ncRNA.
ACCESSION   XR_011778584
VERSION     XR_011778584.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3980
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3980
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..3980
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 gttggtatga tgttgctagc caattccacc atcatgattc tggattggca tacgaatgaa
       61 agattctgta ccagcggtgt tggtggtaag attcaacgat catcgttgtc ttcataaaga
      121 cacacttttg caatcgccgt atcatgttca tcaggtgtta tgtaaggcgt taaagtctat
      181 ggcccctcaa ggattgtgca gtgggtttat tttttgatct ttttcccgtc atcggtgaaa
      241 catcgggtat tctgtaagga gtaatatcta cgactaaatc tcaatcgagg agttcgatct
      301 aagtttagaa ttgggtttgt ttgctgccgg agttatgata ttaccaactg atcttgccta
      361 gcatatactt tgaaaacaat ttaattgatg atgtacgccc tgaataactt ttcaatgaac
      421 actagaaggt tgttaactgc agataagcta cttctactta taattgtgcc gctatcatga
      481 aataactatg atcctctact atgcctggca aacgggtcag gttgggtcgg tttgggtaac
      541 gggtcaaaat ggttttgggt tgaaatgggt cataggtcaa acgggtcaat ttttaaacgg
      601 gtcaaaatgg gtcaggttgg gtcagtttgg gtaacgggtc gaaacgggtc acaggtcagt
      661 tgggtcaaat gggtcaaatg ggttacatcg ctttttttta catttattac ataattttag
      721 ttattattat ttattatata tacgtaagaa ctattaatat acataataaa tgatataacc
      781 atgaatgctc tcataaattt ttgacgaatg aaactttttg tgcttgaccc atttgaccca
      841 ttcacaaaac ccattagacc catttctatt tattgatctt tgagtattga tacccattag
      901 acccgttcct tcattttttt ttataggact caataggttg gagagaaact catttggatc
      961 attttttaag ttttgattta tatttttaga cttaattttt ctcaagaccc aattgacctg
     1021 aaagcttaac ccatttgacc cgaatttcag tgtatgggtc acgattgcca ggtctatcct
     1081 ctaccaacat tttaatgagg taattcttgg tattacttgc accctttatt tatttactta
     1141 ttttttcttt gttactccac aatatgttac tgtagaattc attgcttatg ttatgaggtc
     1201 tattcgtgta gctaattatg gtgtcaaaat tatcgacaat tctaggcccc actttcgatt
     1261 agataggttt cggtcttaat caagataggt caagggcgcg tcggaacggt cggtagctac
     1321 ttagtctcat ccgagagtct aatctccttg tactgctttt tttcttttca aagaaaaaag
     1381 gtcaatttag gctccttccc ttccaacaca tagcttaggt aatggttact ttccatcaat
     1441 tattgtatat gttatttgta tttttatttt tctcgattaa gacattccat tgattttaat
     1501 ggattgagaa aattactttt cttgtgatta atctgtgatc ttacaccaaa ttctaataga
     1561 tgtaattact tattaaaatt taatcttcca ttcaattgtg atcttatcgg tttgaagttt
     1621 tccaaaatct gagtgattga taactggtgg tttataaaat gctcaagaaa tgtttgatga
     1681 aatgcgttgg tgagtatatt ttatgttttt ttgtcaacat ataaaatgtc agtcactttt
     1741 ctaatatttg ataccttctt ttaatgttct gatatttgat tctacacatc gatattagtc
     1801 tagagttata tcggggctga gttgatggcg catgctgtac tgtaatactt ttctacttcg
     1861 tgcatcaata gctaacattg ctaagcatat tagcctcaca tgctaccctg caactggtgt
     1921 tagttcatta ctttacatat atatgttagt tgctatattt taaggtgtat atttcattgc
     1981 tttactataa aattgacaat tgagtatctc gaacaaggct gagacgaagg taatattttt
     2041 tagtgaaatc aacatgatac acactacgtg agtacgtgtt taattaaatg tcaaaattta
     2101 tacgagttaa tatcgttaat ctgatcttta acaacaaatt actttacgta aagaatttga
     2161 tcaatggaat tcgaatgaac atcatgcgag taattaatct gttagtaaga tgttacatgg
     2221 cttaggtcac ttgcttgctc atttgtgtat aggaatgtgc ccctttttgg aatcatcaat
     2281 actccttttt tcatgattgt attgtaggta acttttacaa tacggtgctt taacttacac
     2341 aatttgttta aaaaaaaaaa aaaggtactc cgttgagctt aacaaggggt aacaattttc
     2401 tttcattact ataaaaagtt agaagtttcg gcccaacaat tctgacctga tggaatcttt
     2461 aaggcaagga atctattcga acatgctttt atttcttgtg gtttgcatgt tcctaaagac
     2521 ggtaagcctt taactatcta ggaaatgtgc ttcctccagc tttataaagg tttagaattt
     2581 ttttttatac aagtcttcaa aactaagtgc acgtgttggt tgttaggccc ttttgatcct
     2641 ttaggagaaa gcaaattata gctgttatgg taattgtaca aaagctatga ggaaatcctt
     2701 atcaacatgg atgaggaaat tttaaggtac gacattagtt gagagctcaa ccctccctta
     2761 tgtttaaagg gttgctatgc ctttttgctg ctaaagattt tccacaatta aggctgatca
     2821 acaaagcttt caactgtgac tttactctgc ctctttgttt ttgtgtgttt agttaaatga
     2881 aaaaagctag acttacacat atgagcagca atcagtgtaa aaatttaaaa taaacaatac
     2941 ctaacacgtc attaatggat aaacatttaa aataaacaat accaaacaca cccatcttaa
     3001 gtacatttat agcaattaac acattcattt gtgttgaagt cgtagttgta gttgttattt
     3061 agaaataaaa tttgatgatg ttgatgatga tattatgata aaaaaatgtt gctgcttctt
     3121 ccgttattct attgccatct ccaaaactat aaactctaat tttgatcaaa actgttaagg
     3181 ctgtaatgat gaaatactct gtcattgtcg ttgtttgact aaattgagcg aagattgata
     3241 tgatccgtat cttggcgggg caaactcaca aggtttcaat tccagacatc aatgttttta
     3301 gtacttgggt ttaaaaattt aataccaata ccattttgga taagtaatac ttttttttat
     3361 tgatcaggaa gataatggca tggttggatt ttaaagccaa ttagtgtatc gaataacaac
     3421 actcatcaaa gaaaccaaca agaaaaacac tggaagaata aaggttccaa gttcaattca
     3481 acaaaaggaa taccaaaaga atagagaagc ctagcgacat tgcttggtcg gtttgaagat
     3541 gtgaaagaaa aggatttaga gaaactacca ttcaaacgat ggtggccgag gttgaaaatg
     3601 tgtttatgtt tgttaccgga aacatggtta ggaattcgca ataatagctt ggaagatgca
     3661 gttaaatatg gggcgaagtg tatggtttca tattcgatgt tacaacctcc ttggctcctt
     3721 gcttttgatt aatatcagac tggtgacttg gtgacttcag tcatgtcttg attcattata
     3781 aatgagggaa agtttagata tacatatttt ccatgttcat tagtctctca aattccctaa
     3841 ttaccaattt ggcctgttac ctaccatgct acctttctac tttgggcatg gatcctagtg
     3901 tgttttatat atacatgtaa cgtaaaccct ttatatcatc ttattactaa tcttaacttt
     3961 cgtttagaaa tatgtatatt
//
LOCUS       XR_011778585            3781 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X2, ncRNA.
ACCESSION   XR_011778585
VERSION     XR_011778585.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3781
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3781
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..3781
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 gttggtatga tgttgctagc caattccacc atcatgattc tggattggca tacgaatgaa
       61 agattctgta ccagcggtgt tggtggtaag attcaacgat catcgttgtc ttcataaaga
      121 cacacttttg caatcgccgt atcatgttca tcaggtgtta tgtaaggcgt taaagtctat
      181 ggcccctcaa ggattgtgca gtgggtttat tttttgatct ttttcccgtc atcggtgaaa
      241 catcgggtat tctgtaagga gtaatatcta cgactaaatc tcaatcgagg agttcgatct
      301 aagtttagaa ttgggtttgt ttgctgccgg agttatgata ttaccaactg atcttgccta
      361 gcatatactt tgaaaacaat ttaattgatg atgtacgccc tgaataactt ttcaatgaac
      421 actagaaggt tgttaactgc agataagcta cttctactta taattgtgcc gctatcatga
      481 aataactatg atcctctact atgcctggca aacgggtcag gttgggtcgg tttgggtaac
      541 gggtcaaaat ggttttgggt tgaaatgggt cataggtcaa acgggtcaat ttttaaacgg
      601 gtcaaaatgg gtcaggttgg gtcagtttgg gtaacgggtc gaaacgggtc acaggtcagt
      661 tgggtcaaat gggtcaaatg ggttacatcg ctttttttta catttattac ataattttag
      721 ttattattat ttattatata tacgtaagaa ctattaatat acataataaa tgatataacc
      781 atgaatgctc tcataaattt ttgacgaatg aaactttttg tgcttgaccc atttgaccca
      841 ttcacaaaac ccattagacc catttctatt tattgatctt tgagtattga tacccattag
      901 acccgttcct tcattttttt ttataggact caataggttg gagagaaact catttggatc
      961 attttttaag ttttgattta tatttttaga cttaattttt ctcaagaccc aattgacctg
     1021 aaagcttaac ccatttgacc cgaatttcag tgtatgggtc acgattgcca ggtctatcct
     1081 ctaccaacat tttaatgagg taattcttgg tattacttgc accctttatt tatttactta
     1141 ttttttcttt gttactccac aatatgttac tgtagaattc attgcttatg ttatgaggtc
     1201 tattcgtgta gctaattatg gtgtcaaaat tatcgacaat tctaggcccc actttcgatt
     1261 agataggttt cggtcttaat caagataggt caagggcgcg tcggaacggt cggtagctac
     1321 ttagtctcat ccgagagtct aatctccttg tactgctttt tttcttttca aagaaaaaag
     1381 gtcaatttag gctccttccc ttccaacaca tagcttagtt ttccaaaatc tgagtgattg
     1441 ataactggtg gtttataaaa tgctcaagaa atgtttgatg aaatgcgttg gtgagtatat
     1501 tttatgtttt tttgtcaaca tataaaatgt cagtcacttt tctaatattt gataccttct
     1561 tttaatgttc tgatatttga ttctacacat cgatattagt ctagagttat atcggggctg
     1621 agttgatggc gcatgctgta ctgtaatact tttctacttc gtgcatcaat agctaacatt
     1681 gctaagcata ttagcctcac atgctaccct gcaactggtg ttagttcatt actttacata
     1741 tatatgttag ttgctatatt ttaaggtgta tatttcattg ctttactata aaattgacaa
     1801 ttgagtatct cgaacaaggc tgagacgaag gtaatatttt ttagtgaaat caacatgata
     1861 cacactacgt gagtacgtgt ttaattaaat gtcaaaattt atacgagtta atatcgttaa
     1921 tctgatcttt aacaacaaat tactttacgt aaagaatttg atcaatggaa ttcgaatgaa
     1981 catcatgcga gtaattaatc tgttagtaag atgttacatg gcttaggtca cttgcttgct
     2041 catttgtgta taggaatgtg cccctttttg gaatcatcaa tactcctttt ttcatgattg
     2101 tattgtaggt aacttttaca atacggtgct ttaacttaca caatttgttt aaaaaaaaaa
     2161 aaaaggtact ccgttgagct taacaagggg taacaatttt ctttcattac tataaaaagt
     2221 tagaagtttc ggcccaacaa ttctgacctg atggaatctt taaggcaagg aatctattcg
     2281 aacatgcttt tatttcttgt ggtttgcatg ttcctaaaga cggtaagcct ttaactatct
     2341 aggaaatgtg cttcctccag ctttataaag gtttagaatt tttttttata caagtcttca
     2401 aaactaagtg cacgtgttgg ttgttaggcc cttttgatcc tttaggagaa agcaaattat
     2461 agctgttatg gtaattgtac aaaagctatg aggaaatcct tatcaacatg gatgaggaaa
     2521 ttttaaggta cgacattagt tgagagctca accctccctt atgtttaaag ggttgctatg
     2581 cctttttgct gctaaagatt ttccacaatt aaggctgatc aacaaagctt tcaactgtga
     2641 ctttactctg cctctttgtt tttgtgtgtt tagttaaatg aaaaaagcta gacttacaca
     2701 tatgagcagc aatcagtgta aaaatttaaa ataaacaata cctaacacgt cattaatgga
     2761 taaacattta aaataaacaa taccaaacac acccatctta agtacattta tagcaattaa
     2821 cacattcatt tgtgttgaag tcgtagttgt agttgttatt tagaaataaa atttgatgat
     2881 gttgatgatg atattatgat aaaaaaatgt tgctgcttct tccgttattc tattgccatc
     2941 tccaaaacta taaactctaa ttttgatcaa aactgttaag gctgtaatga tgaaatactc
     3001 tgtcattgtc gttgtttgac taaattgagc gaagattgat atgatccgta tcttggcggg
     3061 gcaaactcac aaggtttcaa ttccagacat caatgttttt agtacttggg tttaaaaatt
     3121 taataccaat accattttgg ataagtaata ctttttttta ttgatcagga agataatggc
     3181 atggttggat tttaaagcca attagtgtat cgaataacaa cactcatcaa agaaaccaac
     3241 aagaaaaaca ctggaagaat aaaggttcca agttcaattc aacaaaagga ataccaaaag
     3301 aatagagaag cctagcgaca ttgcttggtc ggtttgaaga tgtgaaagaa aaggatttag
     3361 agaaactacc attcaaacga tggtggccga ggttgaaaat gtgtttatgt ttgttaccgg
     3421 aaacatggtt aggaattcgc aataatagct tggaagatgc agttaaatat ggggcgaagt
     3481 gtatggtttc atattcgatg ttacaacctc cttggctcct tgcttttgat taatatcaga
     3541 ctggtgactt ggtgacttca gtcatgtctt gattcattat aaatgaggga aagtttagat
     3601 atacatattt tccatgttca ttagtctctc aaattcccta attaccaatt tggcctgtta
     3661 cctaccatgc tacctttcta ctttgggcat ggatcctagt gtgttttata tatacatgta
     3721 acgtaaaccc tttatatcat cttattacta atcttaactt tcgtttagaa atatgtatat
     3781 t
//
LOCUS       XR_011778586            3357 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X3, ncRNA.
ACCESSION   XR_011778586
VERSION     XR_011778586.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3357
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3357
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..3357
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 ttggtatgat gttgctagcc aattccacca tcatgattct ggattggcat acgaatgaaa
       61 gattctgtac cagcggtgtt ggtggtaaga ttcaacgatc atcgttgtct tcataaagac
      121 acacttttgc aatcgccgta tcatgttcat caggtgttat gtaaggcgtt aaagtctatg
      181 gcccctcaag gattgtgcag tgggtttatt ttttgatctt tttcccgtca tcggtgaaac
      241 atcgggtatt ctgtaaggag taatatctac gactaaatct caatcgagga gttcgatcta
      301 agtttagaat tgggtttgtt tgctgccgga gttatgatat taccaactga tcttgcctag
      361 catatacttt gaaaacaatt taattgatga tgtacgccct gaataacttt tcaatgaaca
      421 ctagaagtgt atgggtcacg attgccaggt ctatcctcta ccaacatttt aatgaggtaa
      481 ttcttggtat tacttgcacc ctttatttat ttacttattt tttctttgtt actccacaat
      541 atgttactgt agaattcatt gcttatgtta tgaggtctat tcgtgtagct aattatggtg
      601 tcaaaattat cgacaattct aggccccact ttcgattaga taggtttcgg tcttaatcaa
      661 gataggtcaa gggcgcgtcg gaacggtcgg tagctactta gtctcatccg agagtctaat
      721 ctccttgtac tgcttttttt cttttcaaag aaaaaaggtc aatttaggct ccttcccttc
      781 caacacatag cttaggtaat ggttactttc catcaattat tgtatatgtt atttgtattt
      841 ttatttttct cgattaagac attccattga ttttaatgga ttgagaaaat tacttttctt
      901 gtgattaatc tgtgatctta caccaaattc taatagatgt aattacttat taaaatttaa
      961 tcttccattc aattgtgatc ttatcggttt gaagttttcc aaaatctgag tgattgataa
     1021 ctggtggttt ataaaatgct caagaaatgt ttgatgaaat gcgttggtga gtatatttta
     1081 tgtttttttg tcaacatata aaatgtcagt cacttttcta atatttgata ccttctttta
     1141 atgttctgat atttgattct acacatcgat attagtctag agttatatcg gggctgagtt
     1201 gatggcgcat gctgtactgt aatacttttc tacttcgtgc atcaatagct aacattgcta
     1261 agcatattag cctcacatgc taccctgcaa ctggtgttag ttcattactt tacatatata
     1321 tgttagttgc tatattttaa ggtgtatatt tcattgcttt actataaaat tgacaattga
     1381 gtatctcgaa caaggctgag acgaaggtaa tattttttag tgaaatcaac atgatacaca
     1441 ctacgtgagt acgtgtttaa ttaaatgtca aaatttatac gagttaatat cgttaatctg
     1501 atctttaaca acaaattact ttacgtaaag aatttgatca atggaattcg aatgaacatc
     1561 atgcgagtaa ttaatctgtt agtaagatgt tacatggctt aggtcacttg cttgctcatt
     1621 tgtgtatagg aatgtgcccc tttttggaat catcaatact ccttttttca tgattgtatt
     1681 gtaggtaact tttacaatac ggtgctttaa cttacacaat ttgtttaaaa aaaaaaaaaa
     1741 ggtactccgt tgagcttaac aaggggtaac aattttcttt cattactata aaaagttaga
     1801 agtttcggcc caacaattct gacctgatgg aatctttaag gcaaggaatc tattcgaaca
     1861 tgcttttatt tcttgtggtt tgcatgttcc taaagacggt aagcctttaa ctatctagga
     1921 aatgtgcttc ctccagcttt ataaaggttt agaatttttt tttatacaag tcttcaaaac
     1981 taagtgcacg tgttggttgt taggcccttt tgatccttta ggagaaagca aattatagct
     2041 gttatggtaa ttgtacaaaa gctatgagga aatccttatc aacatggatg aggaaatttt
     2101 aaggtacgac attagttgag agctcaaccc tcccttatgt ttaaagggtt gctatgcctt
     2161 tttgctgcta aagattttcc acaattaagg ctgatcaaca aagctttcaa ctgtgacttt
     2221 actctgcctc tttgtttttg tgtgtttagt taaatgaaaa aagctagact tacacatatg
     2281 agcagcaatc agtgtaaaaa tttaaaataa acaataccta acacgtcatt aatggataaa
     2341 catttaaaat aaacaatacc aaacacaccc atcttaagta catttatagc aattaacaca
     2401 ttcatttgtg ttgaagtcgt agttgtagtt gttatttaga aataaaattt gatgatgttg
     2461 atgatgatat tatgataaaa aaatgttgct gcttcttccg ttattctatt gccatctcca
     2521 aaactataaa ctctaatttt gatcaaaact gttaaggctg taatgatgaa atactctgtc
     2581 attgtcgttg tttgactaaa ttgagcgaag attgatatga tccgtatctt ggcggggcaa
     2641 actcacaagg tttcaattcc agacatcaat gtttttagta cttgggttta aaaatttaat
     2701 accaatacca ttttggataa gtaatacttt tttttattga tcaggaagat aatggcatgg
     2761 ttggatttta aagccaatta gtgtatcgaa taacaacact catcaaagaa accaacaaga
     2821 aaaacactgg aagaataaag gttccaagtt caattcaaca aaaggaatac caaaagaata
     2881 gagaagccta gcgacattgc ttggtcggtt tgaagatgtg aaagaaaagg atttagagaa
     2941 actaccattc aaacgatggt ggccgaggtt gaaaatgtgt ttatgtttgt taccggaaac
     3001 atggttagga attcgcaata atagcttgga agatgcagtt aaatatgggg cgaagtgtat
     3061 ggtttcatat tcgatgttac aacctccttg gctccttgct tttgattaat atcagactgg
     3121 tgacttggtg acttcagtca tgtcttgatt cattataaat gagggaaagt ttagatatac
     3181 atattttcca tgttcattag tctctcaaat tccctaatta ccaatttggc ctgttaccta
     3241 ccatgctacc tttctacttt gggcatggat cctagtgtgt tttatatata catgtaacgt
     3301 aaacccttta tatcatctta ttactaatct taactttcgt ttagaaatat gtatatt
//
LOCUS       XR_011778587            3871 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X4, ncRNA.
ACCESSION   XR_011778587
VERSION     XR_011778587.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3871
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..3871
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 gttggtatga tgttgctagc caattccacc atcatgattc tggattggca tacgaatgaa
       61 agattctgta ccagcggtgt tggtggtaag attcaacgat catcgttgtc ttcataaaga
      121 cacacttttg caatcgccgt atcatgttca tcaggtgtta tgtaaggcgt taaagtctat
      181 ggcccctcaa ggattgtgca gtgggtttat tttttgatct ttttcccgtc atcggtgaaa
      241 catcgggtat tctgtaagga gtaatatcta cgactaaatc tcaatcgagg agttcgatct
      301 aagtttagaa ttgggtttgt ttgctgccgg agttatgata ttaccaactg atcttgccta
      361 gcatatactt tgaaaacaat ttaattgatg atgtacgccc tgaataactt ttcaatgaac
      421 actagaaggt tgttaactgc agataagcta cttctactta taattgtgcc gctatcatga
      481 aataactatg atcctctact atgcctggca aacgggtcag gttgggtcgg tttgggtaac
      541 gggtcaaaat ggttttgggt tgaaatgggt cataggtcaa acgggtcaat ttttaaacgg
      601 gtcaaaatgg gtcaggttgg gtcagtttgg gtaacgggtc gaaacgggtc acaggtcagt
      661 tgggtcaaat gggtcaaatg ggttacatcg ctttttttta catttattac ataattttag
      721 ttattattat ttattatata tacgtaagaa ctattaatat acataataaa tgatataacc
      781 atgaatgctc tcataaattt ttgacgaatg aaactttttg tgcttgaccc atttgaccca
      841 ttcacaaaac ccattagacc catttctatt tattgatctt tgagtattga tacccattag
      901 acccgttcct tcattttttt ttataggact caataggttg gagagaaact catttggatc
      961 attttttaag ttttgattta tatttttaga cttaattttt ctcaagaccc aattgacctg
     1021 aaagcttaac ccatttgacc cgaatttcag tgtatgggtc acgattgcca ggtctatcct
     1081 ctaccaacat tttaatgagg taattcttgg tattacttgc accctttatt tatttactta
     1141 ttttttcttt gttactccac aatatgttac tgtagaattc attgcttatg ttatgaggtc
     1201 tattcgtgta gctaattatg gtgtcaaaat tatcgacaat tctaggcccc actttcgatt
     1261 agataggttt cggtcttaat caagataggt caagggcgcg tcggaacggt cggtagctac
     1321 ttagtctcat ccgagagtct aatctccttg tactgctttt tttcttttca aagaaaaaag
     1381 gtcaatttag gctccttccc ttccaacaca tagcttaggt aatggttact ttccatcaat
     1441 tattgtatat gttatttgta tttttatttt tctcgattaa gacattccat tgattttaat
     1501 ggattgagaa aattactttt cttgtgatta atctgtgatc ttacaccaaa ttctaataga
     1561 tgtaattact tattaaaatt taatcttcca ttcaattgtg atcttatcgg tttgaagttt
     1621 tccaaaatct gagtgattga taactggtgg tttataaaat gctcaagaaa tgtttgatga
     1681 aatgcgttgt ctagagttat atcggggctg agttgatggc gcatgctgta ctgtaatact
     1741 tttctacttc gtgcatcaat agctaacatt gctaagcata ttagcctcac atgctaccct
     1801 gcaactggtg ttagttcatt actttacata tatatgttag ttgctatatt ttaaggtgta
     1861 tatttcattg ctttactata aaattgacaa ttgagtatct cgaacaaggc tgagacgaag
     1921 gtaatatttt ttagtgaaat caacatgata cacactacgt gagtacgtgt ttaattaaat
     1981 gtcaaaattt atacgagtta atatcgttaa tctgatcttt aacaacaaat tactttacgt
     2041 aaagaatttg atcaatggaa ttcgaatgaa catcatgcga gtaattaatc tgttagtaag
     2101 atgttacatg gcttaggtca cttgcttgct catttgtgta taggaatgtg cccctttttg
     2161 gaatcatcaa tactcctttt ttcatgattg tattgtaggt aacttttaca atacggtgct
     2221 ttaacttaca caatttgttt aaaaaaaaaa aaaaggtact ccgttgagct taacaagggg
     2281 taacaatttt ctttcattac tataaaaagt tagaagtttc ggcccaacaa ttctgacctg
     2341 atggaatctt taaggcaagg aatctattcg aacatgcttt tatttcttgt ggtttgcatg
     2401 ttcctaaaga cggtaagcct ttaactatct aggaaatgtg cttcctccag ctttataaag
     2461 gtttagaatt tttttttata caagtcttca aaactaagtg cacgtgttgg ttgttaggcc
     2521 cttttgatcc tttaggagaa agcaaattat agctgttatg gtaattgtac aaaagctatg
     2581 aggaaatcct tatcaacatg gatgaggaaa ttttaaggta cgacattagt tgagagctca
     2641 accctccctt atgtttaaag ggttgctatg cctttttgct gctaaagatt ttccacaatt
     2701 aaggctgatc aacaaagctt tcaactgtga ctttactctg cctctttgtt tttgtgtgtt
     2761 tagttaaatg aaaaaagcta gacttacaca tatgagcagc aatcagtgta aaaatttaaa
     2821 ataaacaata cctaacacgt cattaatgga taaacattta aaataaacaa taccaaacac
     2881 acccatctta agtacattta tagcaattaa cacattcatt tgtgttgaag tcgtagttgt
     2941 agttgttatt tagaaataaa atttgatgat gttgatgatg atattatgat aaaaaaatgt
     3001 tgctgcttct tccgttattc tattgccatc tccaaaacta taaactctaa ttttgatcaa
     3061 aactgttaag gctgtaatga tgaaatactc tgtcattgtc gttgtttgac taaattgagc
     3121 gaagattgat atgatccgta tcttggcggg gcaaactcac aaggtttcaa ttccagacat
     3181 caatgttttt agtacttggg tttaaaaatt taataccaat accattttgg ataagtaata
     3241 ctttttttta ttgatcagga agataatggc atggttggat tttaaagcca attagtgtat
     3301 cgaataacaa cactcatcaa agaaaccaac aagaaaaaca ctggaagaat aaaggttcca
     3361 agttcaattc aacaaaagga ataccaaaag aatagagaag cctagcgaca ttgcttggtc
     3421 ggtttgaaga tgtgaaagaa aaggatttag agaaactacc attcaaacga tggtggccga
     3481 ggttgaaaat gtgtttatgt ttgttaccgg aaacatggtt aggaattcgc aataatagct
     3541 tggaagatgc agttaaatat ggggcgaagt gtatggtttc atattcgatg ttacaacctc
     3601 cttggctcct tgcttttgat taatatcaga ctggtgactt ggtgacttca gtcatgtctt
     3661 gattcattat aaatgaggga aagtttagat atacatattt tccatgttca ttagtctctc
     3721 aaattcccta attaccaatt tggcctgtta cctaccatgc tacctttcta ctttgggcat
     3781 ggatcctagt gtgttttata tatacatgta acgtaaaccc tttatatcat cttattacta
     3841 atcttaactt tcgtttagaa atatgtatat t
//
LOCUS       XR_011778588            3917 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X5, ncRNA.
ACCESSION   XR_011778588
VERSION     XR_011778588.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3917
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..3917
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 gttggtatga tgttgctagc caattccacc atcatgattc tggattggca tacgaatgaa
       61 agattctgta ccagcggtgt tggtggtaag attcaacgat catcgttgtc ttcataaaga
      121 cacacttttg caatcgccgt atcatgttca tcaggtgtta tgtaaggcgt taaagtctat
      181 ggcccctcaa ggattgtgca gtgggtttat tttttgatct ttttcccgtc atcggtgaaa
      241 catcgggtat tctgtaagga gtaatatcta cgactaaatc tcaatcgagg agttcgatct
      301 aagtttagaa ttgggtttgt ttgctgccgg agttatgata ttaccaactg atcttgccta
      361 gcatatactt tgaaaacaaa taagctactt ctacttataa ttgtgccgct atcatgaaat
      421 aactatgatc ctctactatg cctggcaaac gggtcaggtt gggtcggttt gggtaacggg
      481 tcaaaatggt tttgggttga aatgggtcat aggtcaaacg ggtcaatttt taaacgggtc
      541 aaaatgggtc aggttgggtc agtttgggta acgggtcgaa acgggtcaca ggtcagttgg
      601 gtcaaatggg tcaaatgggt tacatcgctt ttttttacat ttattacata attttagtta
      661 ttattattta ttatatatac gtaagaacta ttaatataca taataaatga tataaccatg
      721 aatgctctca taaatttttg acgaatgaaa ctttttgtgc ttgacccatt tgacccattc
      781 acaaaaccca ttagacccat ttctatttat tgatctttga gtattgatac ccattagacc
      841 cgttccttca ttttttttta taggactcaa taggttggag agaaactcat ttggatcatt
      901 ttttaagttt tgatttatat ttttagactt aatttttctc aagacccaat tgacctgaaa
      961 gcttaaccca tttgacccga atttcagtgt atgggtcacg attgccaggt ctatcctcta
     1021 ccaacatttt aatgaggtaa ttcttggtat tacttgcacc ctttatttat ttacttattt
     1081 tttctttgtt actccacaat atgttactgt agaattcatt gcttatgtta tgaggtctat
     1141 tcgtgtagct aattatggtg tcaaaattat cgacaattct aggccccact ttcgattaga
     1201 taggtttcgg tcttaatcaa gataggtcaa gggcgcgtcg gaacggtcgg tagctactta
     1261 gtctcatccg agagtctaat ctccttgtac tgcttttttt cttttcaaag aaaaaaggtc
     1321 aatttaggct ccttcccttc caacacatag cttaggtaat ggttactttc catcaattat
     1381 tgtatatgtt atttgtattt ttatttttct cgattaagac attccattga ttttaatgga
     1441 ttgagaaaat tacttttctt gtgattaatc tgtgatctta caccaaattc taatagatgt
     1501 aattacttat taaaatttaa tcttccattc aattgtgatc ttatcggttt gaagttttcc
     1561 aaaatctgag tgattgataa ctggtggttt ataaaatgct caagaaatgt ttgatgaaat
     1621 gcgttggtga gtatatttta tgtttttttg tcaacatata aaatgtcagt cacttttcta
     1681 atatttgata ccttctttta atgttctgat atttgattct acacatcgat attagtctag
     1741 agttatatcg gggctgagtt gatggcgcat gctgtactgt aatacttttc tacttcgtgc
     1801 atcaatagct aacattgcta agcatattag cctcacatgc taccctgcaa ctggtgttag
     1861 ttcattactt tacatatata tgttagttgc tatattttaa ggtgtatatt tcattgcttt
     1921 actataaaat tgacaattga gtatctcgaa caaggctgag acgaaggtaa tattttttag
     1981 tgaaatcaac atgatacaca ctacgtgagt acgtgtttaa ttaaatgtca aaatttatac
     2041 gagttaatat cgttaatctg atctttaaca acaaattact ttacgtaaag aatttgatca
     2101 atggaattcg aatgaacatc atgcgagtaa ttaatctgtt agtaagatgt tacatggctt
     2161 aggtcacttg cttgctcatt tgtgtatagg aatgtgcccc tttttggaat catcaatact
     2221 ccttttttca tgattgtatt gtaggtaact tttacaatac ggtgctttaa cttacacaat
     2281 ttgtttaaaa aaaaaaaaaa ggtactccgt tgagcttaac aaggggtaac aattttcttt
     2341 cattactata aaaagttaga agtttcggcc caacaattct gacctgatgg aatctttaag
     2401 gcaaggaatc tattcgaaca tgcttttatt tcttgtggtt tgcatgttcc taaagacggt
     2461 aagcctttaa ctatctagga aatgtgcttc ctccagcttt ataaaggttt agaatttttt
     2521 tttatacaag tcttcaaaac taagtgcacg tgttggttgt taggcccttt tgatccttta
     2581 ggagaaagca aattatagct gttatggtaa ttgtacaaaa gctatgagga aatccttatc
     2641 aacatggatg aggaaatttt aaggtacgac attagttgag agctcaaccc tcccttatgt
     2701 ttaaagggtt gctatgcctt tttgctgcta aagattttcc acaattaagg ctgatcaaca
     2761 aagctttcaa ctgtgacttt actctgcctc tttgtttttg tgtgtttagt taaatgaaaa
     2821 aagctagact tacacatatg agcagcaatc agtgtaaaaa tttaaaataa acaataccta
     2881 acacgtcatt aatggataaa catttaaaat aaacaatacc aaacacaccc atcttaagta
     2941 catttatagc aattaacaca ttcatttgtg ttgaagtcgt agttgtagtt gttatttaga
     3001 aataaaattt gatgatgttg atgatgatat tatgataaaa aaatgttgct gcttcttccg
     3061 ttattctatt gccatctcca aaactataaa ctctaatttt gatcaaaact gttaaggctg
     3121 taatgatgaa atactctgtc attgtcgttg tttgactaaa ttgagcgaag attgatatga
     3181 tccgtatctt ggcggggcaa actcacaagg tttcaattcc agacatcaat gtttttagta
     3241 cttgggttta aaaatttaat accaatacca ttttggataa gtaatacttt tttttattga
     3301 tcaggaagat aatggcatgg ttggatttta aagccaatta gtgtatcgaa taacaacact
     3361 catcaaagaa accaacaaga aaaacactgg aagaataaag gttccaagtt caattcaaca
     3421 aaaggaatac caaaagaata gagaagccta gcgacattgc ttggtcggtt tgaagatgtg
     3481 aaagaaaagg atttagagaa actaccattc aaacgatggt ggccgaggtt gaaaatgtgt
     3541 ttatgtttgt taccggaaac atggttagga attcgcaata atagcttgga agatgcagtt
     3601 aaatatgggg cgaagtgtat ggtttcatat tcgatgttac aacctccttg gctccttgct
     3661 tttgattaat atcagactgg tgacttggtg acttcagtca tgtcttgatt cattataaat
     3721 gagggaaagt ttagatatac atattttcca tgttcattag tctctcaaat tccctaatta
     3781 ccaatttggc ctgttaccta ccatgctacc tttctacttt gggcatggat cctagtgtgt
     3841 tttatatata catgtaacgt aaacccttta tatcatctta ttactaatct taactttcgt
     3901 ttagaaatat gtatatt
//
LOCUS       XR_011778589            3866 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X6, ncRNA.
ACCESSION   XR_011778589
VERSION     XR_011778589.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3866
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3866
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..3866
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 gttggtatga tgttgctagc caattccacc atcatgattc tggattggca tacgaatgaa
       61 agattctgta ccagcggtgt tggtggtaag attcaacgat catcgttgtc ttcataaaga
      121 cacacttttg caatcgccgt atcatgttca tcaggtgtta tgtaaggcgt taaagtctat
      181 ggcccctcaa ggattgtgca gtgggtttat tttttgatct ttttcccgtc atcggtgaaa
      241 catcgggtat tctgtaagga gtaatatcta cgactaaatc tcaatcgagg agttcgatct
      301 aagtttagaa ttgggtttgt ttgctgccgg agttatgata ttaccaactg atcttgccta
      361 gcatatactt tgaaaacaat ttaattgatg atgtacgccc tgaataactt ttcaatgaac
      421 actagaaggt tgttaactgc agataagcta cttctactta taattgtgcc gctatcatga
      481 aataactatg atcctctact atgcctggca aacgggtcag gttgggtcgg tttgggtaac
      541 gggtcaaaat ggttttgggt tgaaatgggt cataggtcaa acgggtcaat ttttaaacgg
      601 gtcaaaatgg gtcaggttgg gtcagtttgg gtaacgggtc gaaacgggtc acaggtcagt
      661 tgggtcaaat gggtcaaatg ggttacatcg ctttttttta catttattac ataattttag
      721 ttattattat ttattatata tacgtaagaa ctattaatat acataataaa tgatataacc
      781 atgaatgctc tcataaattt ttgacgaatg aaactttttg tgcttgaccc atttgaccca
      841 ttcacaaaac ccattagacc catttctatt tattgatctt tgagtattga tacccattag
      901 acccgttcct tcattttttt ttataggact caataggttg gagagaaact catttggatc
      961 attttttaag ttttgattta tatttttaga cttaattttt ctcaagaccc aattgacctg
     1021 aaagcttaac ccatttgacc cgaatttcag tgtatgggtc acgattgcca ggtctatcct
     1081 ctaccaacat tttaatgagg taattcttgg tattacttgc accctttatt tatttactta
     1141 ttttttcttt gttactccac aatatgttac tgtagaattc attgcttatg ttatgaggtc
     1201 tattcgtgta gctaattatg gtgtcaaaat tatcgacaat tctaggcccc actttcgatt
     1261 agataggttt cggtcttaat caagataggt caagggcgcg tcggaacggt cggtagctac
     1321 ttagtctcat ccgagagtct aatctccttg tactgctttt tttcttttca aagaaaaaag
     1381 gtcaatttag gctccttccc ttccaacaca tagcttaggt aatggttact ttccatcaat
     1441 tattgtatat gttatttgta tttttatttt tctcgattaa gacattccat tgattttaat
     1501 ggattgagaa aattactttt cttgtgatta atctgtgatc ttacaccaaa ttctaataga
     1561 tgtaattact tattaaaatt taatcttcca ttcaattgtg atcttatcgg tttgaagttt
     1621 tccaaaatct gagtgattga taactggtgg tttataaaat gctcaagaaa tgtttgatga
     1681 aatgcgttga gttatatcgg ggctgagttg atggcgcatg ctgtactgta atacttttct
     1741 acttcgtgca tcaatagcta acattgctaa gcatattagc ctcacatgct accctgcaac
     1801 tggtgttagt tcattacttt acatatatat gttagttgct atattttaag gtgtatattt
     1861 cattgcttta ctataaaatt gacaattgag tatctcgaac aaggctgaga cgaaggtaat
     1921 attttttagt gaaatcaaca tgatacacac tacgtgagta cgtgtttaat taaatgtcaa
     1981 aatttatacg agttaatatc gttaatctga tctttaacaa caaattactt tacgtaaaga
     2041 atttgatcaa tggaattcga atgaacatca tgcgagtaat taatctgtta gtaagatgtt
     2101 acatggctta ggtcacttgc ttgctcattt gtgtatagga atgtgcccct ttttggaatc
     2161 atcaatactc cttttttcat gattgtattg taggtaactt ttacaatacg gtgctttaac
     2221 ttacacaatt tgtttaaaaa aaaaaaaaag gtactccgtt gagcttaaca aggggtaaca
     2281 attttctttc attactataa aaagttagaa gtttcggccc aacaattctg acctgatgga
     2341 atctttaagg caaggaatct attcgaacat gcttttattt cttgtggttt gcatgttcct
     2401 aaagacggta agcctttaac tatctaggaa atgtgcttcc tccagcttta taaaggttta
     2461 gaattttttt ttatacaagt cttcaaaact aagtgcacgt gttggttgtt aggccctttt
     2521 gatcctttag gagaaagcaa attatagctg ttatggtaat tgtacaaaag ctatgaggaa
     2581 atccttatca acatggatga ggaaatttta aggtacgaca ttagttgaga gctcaaccct
     2641 cccttatgtt taaagggttg ctatgccttt ttgctgctaa agattttcca caattaaggc
     2701 tgatcaacaa agctttcaac tgtgacttta ctctgcctct ttgtttttgt gtgtttagtt
     2761 aaatgaaaaa agctagactt acacatatga gcagcaatca gtgtaaaaat ttaaaataaa
     2821 caatacctaa cacgtcatta atggataaac atttaaaata aacaatacca aacacaccca
     2881 tcttaagtac atttatagca attaacacat tcatttgtgt tgaagtcgta gttgtagttg
     2941 ttatttagaa ataaaatttg atgatgttga tgatgatatt atgataaaaa aatgttgctg
     3001 cttcttccgt tattctattg ccatctccaa aactataaac tctaattttg atcaaaactg
     3061 ttaaggctgt aatgatgaaa tactctgtca ttgtcgttgt ttgactaaat tgagcgaaga
     3121 ttgatatgat ccgtatcttg gcggggcaaa ctcacaaggt ttcaattcca gacatcaatg
     3181 tttttagtac ttgggtttaa aaatttaata ccaataccat tttggataag taatactttt
     3241 ttttattgat caggaagata atggcatggt tggattttaa agccaattag tgtatcgaat
     3301 aacaacactc atcaaagaaa ccaacaagaa aaacactgga agaataaagg ttccaagttc
     3361 aattcaacaa aaggaatacc aaaagaatag agaagcctag cgacattgct tggtcggttt
     3421 gaagatgtga aagaaaagga tttagagaaa ctaccattca aacgatggtg gccgaggttg
     3481 aaaatgtgtt tatgtttgtt accggaaaca tggttaggaa ttcgcaataa tagcttggaa
     3541 gatgcagtta aatatggggc gaagtgtatg gtttcatatt cgatgttaca acctccttgg
     3601 ctccttgctt ttgattaata tcagactggt gacttggtga cttcagtcat gtcttgattc
     3661 attataaatg agggaaagtt tagatataca tattttccat gttcattagt ctctcaaatt
     3721 ccctaattac caatttggcc tgttacctac catgctacct ttctactttg ggcatggatc
     3781 ctagtgtgtt ttatatatac atgtaacgta aaccctttat atcatcttat tactaatctt
     3841 aactttcgtt tagaaatatg tatatt
//
LOCUS       XR_011778590            3667 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X7, ncRNA.
ACCESSION   XR_011778590
VERSION     XR_011778590.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3667
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3667
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..3667
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 gttggtatga tgttgctagc caattccacc atcatgattc tggattggca tacgaatgaa
       61 agattctgta ccagcggtgt tggtggtaag attcaacgat catcgttgtc ttcataaaga
      121 cacacttttg caatcgccgt atcatgttca tcaggtgtta tgtaaggcgt taaagtctat
      181 ggcccctcaa ggattgtgca gtgggtttat tttttgatct ttttcccgtc atcggtgaaa
      241 catcgggtat tctgtaagga gtaatatcta cgactaaatc tcaatcgagg agttcgatct
      301 aagtttagaa ttgggtttgt ttgctgccgg agttatgata ttaccaactg atcttgccta
      361 gcatatactt tgaaaacaat ttaattgatg atgtacgccc tgaataactt ttcaatgaac
      421 actagaaggt tgttaactgc agataagcta cttctactta taattgtgcc gctatcatga
      481 aataactatg atcctctact atgcctggca aacgggtcag gttgggtcgg tttgggtaac
      541 gggtcaaaat ggttttgggt tgaaatgggt cataggtcaa acgggtcaat ttttaaacgg
      601 gtcaaaatgg gtcaggttgg gtcagtttgg gtaacgggtc gaaacgggtc acaggtcagt
      661 tgggtcaaat gggtcaaatg ggttacatcg ctttttttta catttattac ataattttag
      721 ttattattat ttattatata tacgtaagaa ctattaatat acataataaa tgatataacc
      781 atgaatgctc tcataaattt ttgacgaatg aaactttttg tgcttgaccc atttgaccca
      841 ttcacaaaac ccattagacc catttctatt tattgatctt tgagtattga tacccattag
      901 acccgttcct tcattttttt ttataggact caataggttg gagagaaact catttggatc
      961 attttttaag ttttgattta tatttttaga cttaattttt ctcaagaccc aattgacctg
     1021 aaagcttaac ccatttgacc cgaatttcag tgtatgggtc acgattgcca ggtctatcct
     1081 ctaccaacat tttaatgagg taattcttgg tattacttgc accctttatt tatttactta
     1141 ttttttcttt gttactccac aatatgttac tgtagaattc attgcttatg ttatgaggtc
     1201 tattcgtgta gctaattatg gtgtcaaaat tatcgacaat tctaggcccc actttcgatt
     1261 agataggttt cggtcttaat caagataggt caagggcgcg tcggaacggt cggtagctac
     1321 ttagtctcat ccgagagtct aatctccttg tactgctttt tttcttttca aagaaaaaag
     1381 gtcaatttag gctccttccc ttccaacaca tagcttagtt ttccaaaatc tgagtgattg
     1441 ataactggtg gtttataaaa tgctcaagaa atgtttgatg aaatgcgttg agttatatcg
     1501 gggctgagtt gatggcgcat gctgtactgt aatacttttc tacttcgtgc atcaatagct
     1561 aacattgcta agcatattag cctcacatgc taccctgcaa ctggtgttag ttcattactt
     1621 tacatatata tgttagttgc tatattttaa ggtgtatatt tcattgcttt actataaaat
     1681 tgacaattga gtatctcgaa caaggctgag acgaaggtaa tattttttag tgaaatcaac
     1741 atgatacaca ctacgtgagt acgtgtttaa ttaaatgtca aaatttatac gagttaatat
     1801 cgttaatctg atctttaaca acaaattact ttacgtaaag aatttgatca atggaattcg
     1861 aatgaacatc atgcgagtaa ttaatctgtt agtaagatgt tacatggctt aggtcacttg
     1921 cttgctcatt tgtgtatagg aatgtgcccc tttttggaat catcaatact ccttttttca
     1981 tgattgtatt gtaggtaact tttacaatac ggtgctttaa cttacacaat ttgtttaaaa
     2041 aaaaaaaaaa ggtactccgt tgagcttaac aaggggtaac aattttcttt cattactata
     2101 aaaagttaga agtttcggcc caacaattct gacctgatgg aatctttaag gcaaggaatc
     2161 tattcgaaca tgcttttatt tcttgtggtt tgcatgttcc taaagacggt aagcctttaa
     2221 ctatctagga aatgtgcttc ctccagcttt ataaaggttt agaatttttt tttatacaag
     2281 tcttcaaaac taagtgcacg tgttggttgt taggcccttt tgatccttta ggagaaagca
     2341 aattatagct gttatggtaa ttgtacaaaa gctatgagga aatccttatc aacatggatg
     2401 aggaaatttt aaggtacgac attagttgag agctcaaccc tcccttatgt ttaaagggtt
     2461 gctatgcctt tttgctgcta aagattttcc acaattaagg ctgatcaaca aagctttcaa
     2521 ctgtgacttt actctgcctc tttgtttttg tgtgtttagt taaatgaaaa aagctagact
     2581 tacacatatg agcagcaatc agtgtaaaaa tttaaaataa acaataccta acacgtcatt
     2641 aatggataaa catttaaaat aaacaatacc aaacacaccc atcttaagta catttatagc
     2701 aattaacaca ttcatttgtg ttgaagtcgt agttgtagtt gttatttaga aataaaattt
     2761 gatgatgttg atgatgatat tatgataaaa aaatgttgct gcttcttccg ttattctatt
     2821 gccatctcca aaactataaa ctctaatttt gatcaaaact gttaaggctg taatgatgaa
     2881 atactctgtc attgtcgttg tttgactaaa ttgagcgaag attgatatga tccgtatctt
     2941 ggcggggcaa actcacaagg tttcaattcc agacatcaat gtttttagta cttgggttta
     3001 aaaatttaat accaatacca ttttggataa gtaatacttt tttttattga tcaggaagat
     3061 aatggcatgg ttggatttta aagccaatta gtgtatcgaa taacaacact catcaaagaa
     3121 accaacaaga aaaacactgg aagaataaag gttccaagtt caattcaaca aaaggaatac
     3181 caaaagaata gagaagccta gcgacattgc ttggtcggtt tgaagatgtg aaagaaaagg
     3241 atttagagaa actaccattc aaacgatggt ggccgaggtt gaaaatgtgt ttatgtttgt
     3301 taccggaaac atggttagga attcgcaata atagcttgga agatgcagtt aaatatgggg
     3361 cgaagtgtat ggtttcatat tcgatgttac aacctccttg gctccttgct tttgattaat
     3421 atcagactgg tgacttggtg acttcagtca tgtcttgatt cattataaat gagggaaagt
     3481 ttagatatac atattttcca tgttcattag tctctcaaat tccctaatta ccaatttggc
     3541 ctgttaccta ccatgctacc tttctacttt gggcatggat cctagtgtgt tttatatata
     3601 catgtaacgt aaacccttta tatcatctta ttactaatct taactttcgt ttagaaatat
     3661 gtatatt
//
LOCUS       XR_011778591            2838 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X8, ncRNA.
ACCESSION   XR_011778591
VERSION     XR_011778591.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2838
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..2838
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 tggtatgatg ttgctagcca attccaccat catgattctg gattggcata cgaatgaaag
       61 attctgtacc agcggtgttg gtggtaagat tcaacgatca tcgttgtctt cataaagaca
      121 cacttttgca atcgccgtat catgttcatc aggtgttatg taaggcgtta aagtctatgg
      181 cccctcaagg attgtgcagt gggtttattt tttgatcttt ttcccgtcat cggtgaaaca
      241 tcgggtattc tgtaaggagt aatatctacg actaaatctc aatcgaggag ttcgatctaa
      301 gtttagaatt gggtttgttt gctgccggag ttatgatatt accaactgat cttgcctagc
      361 atatactttg aaaacaattt aattgatgat gtacgccctg aataactttt caatgaacac
      421 tagaagtgta tgggtcacga ttgccaggtc tatcctctac caacatttta atgagttttc
      481 caaaatctga gtgattgata actggtggtt tataaaatgc tcaagaaatg tttgatgaaa
      541 tgcgttggtg agtatatttt atgttttttt gtcaacatat aaaatgtcag tcacttttct
      601 aatatttgat accttctttt aatgttctga tatttgattc tacacatcga tattagtcta
      661 gagttatatc ggggctgagt tgatggcgca tgctgtactg taatactttt ctacttcgtg
      721 catcaatagc taacattgct aagcatatta gcctcacatg ctaccctgca actggtgtta
      781 gttcattact ttacatatat atgttagttg ctatatttta aggtgtatat ttcattgctt
      841 tactataaaa ttgacaattg agtatctcga acaaggctga gacgaaggta atatttttta
      901 gtgaaatcaa catgatacac actacgtgag tacgtgttta attaaatgtc aaaatttata
      961 cgagttaata tcgttaatct gatctttaac aacaaattac tttacgtaaa gaatttgatc
     1021 aatggaattc gaatgaacat catgcgagta attaatctgt tagtaagatg ttacatggct
     1081 taggtcactt gcttgctcat ttgtgtatag gaatgtgccc ctttttggaa tcatcaatac
     1141 tccttttttc atgattgtat tgtaggtaac ttttacaata cggtgcttta acttacacaa
     1201 tttgtttaaa aaaaaaaaaa aggtactccg ttgagcttaa caaggggtaa caattttctt
     1261 tcattactat aaaaagttag aagtttcggc ccaacaattc tgacctgatg gaatctttaa
     1321 ggcaaggaat ctattcgaac atgcttttat ttcttgtggt ttgcatgttc ctaaagacgg
     1381 taagccttta actatctagg aaatgtgctt cctccagctt tataaaggtt tagaattttt
     1441 ttttatacaa gtcttcaaaa ctaagtgcac gtgttggttg ttaggccctt ttgatccttt
     1501 aggagaaagc aaattatagc tgttatggta attgtacaaa agctatgagg aaatccttat
     1561 caacatggat gaggaaattt taaggtacga cattagttga gagctcaacc ctcccttatg
     1621 tttaaagggt tgctatgcct ttttgctgct aaagattttc cacaattaag gctgatcaac
     1681 aaagctttca actgtgactt tactctgcct ctttgttttt gtgtgtttag ttaaatgaaa
     1741 aaagctagac ttacacatat gagcagcaat cagtgtaaaa atttaaaata aacaatacct
     1801 aacacgtcat taatggataa acatttaaaa taaacaatac caaacacacc catcttaagt
     1861 acatttatag caattaacac attcatttgt gttgaagtcg tagttgtagt tgttatttag
     1921 aaataaaatt tgatgatgtt gatgatgata ttatgataaa aaaatgttgc tgcttcttcc
     1981 gttattctat tgccatctcc aaaactataa actctaattt tgatcaaaac tgttaaggct
     2041 gtaatgatga aatactctgt cattgtcgtt gtttgactaa attgagcgaa gattgatatg
     2101 atccgtatct tggcggggca aactcacaag gtttcaattc cagacatcaa tgtttttagt
     2161 acttgggttt aaaaatttaa taccaatacc attttggata agtaatactt ttttttattg
     2221 atcaggaaga taatggcatg gttggatttt aaagccaatt agtgtatcga ataacaacac
     2281 tcatcaaaga aaccaacaag aaaaacactg gaagaataaa ggttccaagt tcaattcaac
     2341 aaaaggaata ccaaaagaat agagaagcct agcgacattg cttggtcggt ttgaagatgt
     2401 gaaagaaaag gatttagaga aactaccatt caaacgatgg tggccgaggt tgaaaatgtg
     2461 tttatgtttg ttaccggaaa catggttagg aattcgcaat aatagcttgg aagatgcagt
     2521 taaatatggg gcgaagtgta tggtttcata ttcgatgtta caacctcctt ggctccttgc
     2581 ttttgattaa tatcagactg gtgacttggt gacttcagtc atgtcttgat tcattataaa
     2641 tgagggaaag tttagatata catattttcc atgttcatta gtctctcaaa ttccctaatt
     2701 accaatttgg cctgttacct accatgctac ctttctactt tgggcatgga tcctagtgtg
     2761 ttttatatat acatgtaacg taaacccttt atatcatctt attactaatc ttaactttcg
     2821 tttagaaata tgtatatt
//
LOCUS       XR_011778592            3280 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903909), transcript variant X9, ncRNA.
ACCESSION   XR_011778592
VERSION     XR_011778592.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3280
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3280
                     /gene="LOC139903909"
                     /note="uncharacterized LOC139903909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903909"
     ncRNA           1..3280
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903909"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139903909"
ORIGIN      
        1 ttggtatgat gttgctagcc aattccacca tcatgattct ggattggcat acgaatgaaa
       61 gattctgtac cagcggtgtt ggtggtaaga ttcaacgatc atcgttgtct tcataaagac
      121 acacttttgc aatcgccgta tcatgttcat caggtgttat gtaaggcgtt aaagtctatg
      181 gcccctcaag gattgtgcag tgggtttatt ttttgatctt tttcccgtca tcggtgaaac
      241 atcgggtatt ctgtaaggag taatatctac gactaaatct caatcgagga gttcgatcta
      301 agtttagaat tgggtttgtt tgctgccgga gttatgatat taccaactga tcttgcctag
      361 catatacttt gaaaacaatt taattgatga tgtacgccct gaataacttt tcaatgaaca
      421 ctagaaggtt gttaactgca gataagctac ttctacttat aattgtgccg ctatcatgaa
      481 ataactatga tcctctacta tgcctggcaa acgggtcagg ttgggtcggt ttgggtaacg
      541 ggtcaaaatg gttttgggtt gaaatgggtc ataggtcaaa cgggtcaatt tttaaacggg
      601 tcaaaatggg tcaggttggg tcagtttggg taacgggtcg aaacgggtca caggtcagtt
      661 gggtcaaatg ggtcaaatgg gttacatcgc ttttttttac atttattaca taattttagt
      721 tattattatt tattatatat acgtaagaac tattaatata cataataaat gatataacca
      781 tgaatgctct cataaatttt tgacgaatga aactttttgt gcttgaccca tttgacccat
      841 tcacaaaacc cattagaccc atttctattt attgatcttt gagtattgat acccattaga
      901 cccgttcctt catttttttt tataggactc aataggttgg agagaaactc atttggatca
      961 ttttttaagt tttgatttat atttttagac ttaatttttc tcaagaccca attgacctga
     1021 aagcttaacc catttgaccc gaatttcagt gtatgggtca cgattgccag gtctatcctc
     1081 taccaacatt ttaatgagtc tagagttata tcggggctga gttgatggcg catgctgtac
     1141 tgtaatactt ttctacttcg tgcatcaata gctaacattg ctaagcatat tagcctcaca
     1201 tgctaccctg caactggtgt tagttcatta ctttacatat atatgttagt tgctatattt
     1261 taaggtgtat atttcattgc tttactataa aattgacaat tgagtatctc gaacaaggct
     1321 gagacgaagg taatattttt tagtgaaatc aacatgatac acactacgtg agtacgtgtt
     1381 taattaaatg tcaaaattta tacgagttaa tatcgttaat ctgatcttta acaacaaatt
     1441 actttacgta aagaatttga tcaatggaat tcgaatgaac atcatgcgag taattaatct
     1501 gttagtaaga tgttacatgg cttaggtcac ttgcttgctc atttgtgtat aggaatgtgc
     1561 ccctttttgg aatcatcaat actccttttt tcatgattgt attgtaggta acttttacaa
     1621 tacggtgctt taacttacac aatttgttta aaaaaaaaaa aaaggtactc cgttgagctt
     1681 aacaaggggt aacaattttc tttcattact ataaaaagtt agaagtttcg gcccaacaat
     1741 tctgacctga tggaatcttt aaggcaagga atctattcga acatgctttt atttcttgtg
     1801 gtttgcatgt tcctaaagac ggtaagcctt taactatcta ggaaatgtgc ttcctccagc
     1861 tttataaagg tttagaattt ttttttatac aagtcttcaa aactaagtgc acgtgttggt
     1921 tgttaggccc ttttgatcct ttaggagaaa gcaaattata gctgttatgg taattgtaca
     1981 aaagctatga ggaaatcctt atcaacatgg atgaggaaat tttaaggtac gacattagtt
     2041 gagagctcaa ccctccctta tgtttaaagg gttgctatgc ctttttgctg ctaaagattt
     2101 tccacaatta aggctgatca acaaagcttt caactgtgac tttactctgc ctctttgttt
     2161 ttgtgtgttt agttaaatga aaaaagctag acttacacat atgagcagca atcagtgtaa
     2221 aaatttaaaa taaacaatac ctaacacgtc attaatggat aaacatttaa aataaacaat
     2281 accaaacaca cccatcttaa gtacatttat agcaattaac acattcattt gtgttgaagt
     2341 cgtagttgta gttgttattt agaaataaaa tttgatgatg ttgatgatga tattatgata
     2401 aaaaaatgtt gctgcttctt ccgttattct attgccatct ccaaaactat aaactctaat
     2461 tttgatcaaa actgttaagg ctgtaatgat gaaatactct gtcattgtcg ttgtttgact
     2521 aaattgagcg aagattgata tgatccgtat cttggcgggg caaactcaca aggtttcaat
     2581 tccagacatc aatgttttta gtacttgggt ttaaaaattt aataccaata ccattttgga
     2641 taagtaatac ttttttttat tgatcaggaa gataatggca tggttggatt ttaaagccaa
     2701 ttagtgtatc gaataacaac actcatcaaa gaaaccaaca agaaaaacac tggaagaata
     2761 aaggttccaa gttcaattca acaaaaggaa taccaaaaga atagagaagc ctagcgacat
     2821 tgcttggtcg gtttgaagat gtgaaagaaa aggatttaga gaaactacca ttcaaacgat
     2881 ggtggccgag gttgaaaatg tgtttatgtt tgttaccgga aacatggtta ggaattcgca
     2941 ataatagctt ggaagatgca gttaaatatg gggcgaagtg tatggtttca tattcgatgt
     3001 tacaacctcc ttggctcctt gcttttgatt aatatcagac tggtgacttg gtgacttcag
     3061 tcatgtcttg attcattata aatgagggaa agtttagata tacatatttt ccatgttcat
     3121 tagtctctca aattccctaa ttaccaattt ggcctgttac ctaccatgct acctttctac
     3181 tttgggcatg gatcctagtg tgttttatat atacatgtaa cgtaaaccct ttatatcatc
     3241 ttattactaa tcttaacttt cgtttagaaa tatgtatatt
//
LOCUS       XM_071885834             688 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mediator of RNA polymerase
            II transcription subunit 9-like (LOC139903910), mRNA.
ACCESSION   XM_071885834
VERSION     XM_071885834.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..688
                     /gene="LOC139903910"
                     /note="mediator of RNA polymerase II transcription subunit
                     9-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139903910"
     CDS             50..592
                     /gene="LOC139903910"
                     /codon_start=1
                     /product="mediator of RNA polymerase II transcription
                     subunit 9-like"
                     /protein_id="XP_071741935.1"
                     /db_xref="GeneID:139903910"
                     /translation="MCKCLNMDQFGGGNWNMIPTISNPTTPSSTQDHLYIQQQQFQQQ
                     QRQQFQQQQQQFQLPQQQQQSYKISQQQQPPPPPQQPSQSLASHFLLQNLVENLADAI
                     ENGTRDQHFDTLVTELSNHFEKCQQLLNTISGSIASKAATVEGQKHKVEEAEQMLNQR
                     RDVIAKYRNSVDEVTKPDIY"
     misc_feature    341..562
                     /gene="LOC139903910"
                     /note="Mediator complex subunit 9 (Med9) C-terminal domain
                     family; Region: Med9-C; cl06533"
                     /db_xref="CDD:471456"
ORIGIN      
        1 tcttccatca ctttttctct atcaagaaga aacaaccgta aagatttgaa tgtgcaagtg
       61 tttaaacatg gatcaatttg gaggtggaaa ctggaacatg atcccaacca tcagcaatcc
      121 tacaacaccg tcatccactc aagaccattt atacattcaa caacaacaat ttcaacagca
      181 gcaacgacaa caatttcagc agcaacaaca acaatttcaa ttaccacaac aacagcaaca
      241 gagctataag atatctcaac agcaacaacc accaccacca ccacaacaac cttcacagtc
      301 actcgcttca cactttctcc tccaaaactt ggtggagaat ttagcagatg caattgaaaa
      361 tggaactcga gatcagcatt ttgatacact ggttactgaa ttgagcaacc actttgagaa
      421 atgccagcag ctcttgaaca ctatatcagg atctattgcc tctaaagctg cgacggtgga
      481 gggacaaaag cacaaagttg aagaagctga acaaatgcta aatcaaagaa gggacgtgat
      541 cgcaaagtac cgaaattctg ttgatgaagt tacaaagcct gatatttatt agtgattatc
      601 ctggaatgtg gacgtataat cttttcctta cattaagatg ttgttactta aattcttctt
      661 tagaggtaga aattaatgaa ttaagaaa
//
LOCUS       XM_071885835             634 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thioredoxin-like protein
            YLS8 (LOC139903911), mRNA.
ACCESSION   XM_071885835
VERSION     XM_071885835.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..634
                     /gene="LOC139903911"
                     /note="thioredoxin-like protein YLS8; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139903911"
     CDS             71..499
                     /gene="LOC139903911"
                     /codon_start=1
                     /product="thioredoxin-like protein YLS8"
                     /protein_id="XP_071741936.1"
                     /db_xref="GeneID:139903911"
                     /translation="MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEV
                     LSSVADTLKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKI
                     NWAMKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY"
     misc_feature    71..496
                     /gene="LOC139903911"
                     /note="U5 snRNP protein, DIM1 family; Provisional; Region:
                     PLN00410"
                     /db_xref="CDD:215109"
     misc_feature    order(131..133,137..142,326..334)
                     /gene="LOC139903911"
                     /note="first critical site [active]"
                     /db_xref="CDD:239252"
     misc_feature    188..199
                     /gene="LOC139903911"
                     /note="second critical site [active]"
                     /db_xref="CDD:239252"
     polyA_site      634
                     /gene="LOC139903911"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttatacgcta cctgcctaga agcaaagcaa ccgtggtgtt ttccctgggc gaaagagaaa
       61 aggagaaacg atgtcgtatt tgctacctca cttgcactcc ggttgggccg tcgatcaagc
      121 gattctcgcc gaggaagaac gtctagtcgt catccgattt ggacatgatt gggacgaaac
      181 ttgtatgcag atggatgaag tgctttcttc agtggctgac acgttgaaga actttgctgt
      241 gatatacttg gttgacatca ccgaagtgcc tgatttcaat acgatgtatg aactttacga
      301 cccatcaact gtgatgttct tctttaggaa caaacacatc atgattgatc ttggtactgg
      361 taacaataac aagatcaatt gggccatgaa ggacaaacag gaattcattg acattgttga
      421 gactgtgtac cgtggagcaa ggaagggtcg tggtttggtc attgcaccta aagactactc
      481 aaccaagtac cgttactaaa attatattca ctggttatca gtgcatggct tgtaccatgt
      541 gttgtaattg aaacagataa aactggctat aagtaacctg ttgtttgtgg actgatgtgt
      601 gatcttttgg aatataatga attgagattt taaa
//
LOCUS       XM_071885836             476 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903912), mRNA.
ACCESSION   XM_071885836
VERSION     XM_071885836.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..476
                     /gene="LOC139903912"
                     /note="uncharacterized LOC139903912; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903912"
     CDS             101..373
                     /gene="LOC139903912"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741937.1"
                     /db_xref="GeneID:139903912"
                     /translation="MSIIHDDYEVEQKKQSAADVTFQYSNFVMACIGFQARPCDMRLH
                     LMKEISGMPTSLKRETTQVAASSDAMGETSSSGTARLEKDDSFRAL"
ORIGIN      
        1 aattgaactc gatttcttta ttctaaacga cccgacctcc atctctacca gaatcacagc
       61 ttcgtgatat tttttcaggg cgaaagagat aagagaaaca atgtcgataa ttcatgatga
      121 ttacgaggtt gagcagaaga agcaaagtgc tgcagatgtt acatttcaat attcaaattt
      181 tgtaatggct tgtattggat ttcaggcccg accttgtgac atgaggctgc atttgatgaa
      241 ggagatatca gggatgccaa cttcgctaaa gagggagacg acccaagtag ctgcatcttc
      301 tgatgcaatg ggggaaactt caagttccgg tactgcaaga cttgagaagg acgacagttt
      361 tcgggcctta tagcaacatt aatgatcatg gttttgagaa tatgttttag atatttgtat
      421 tgtgactttt tgtgtttcta tgcggagagt tcgttatctt gattagttgc ctctac
//
LOCUS       XM_071885837            1471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nucleosome assembly protein
            1;2-like (LOC139903913), mRNA.
ACCESSION   XM_071885837
VERSION     XM_071885837.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-165               JBITNF010000004.1  597369910-597370074 c
            166-209             JBITNF010000004.1  597369775-597369818 c
            210-305             JBITNF010000004.1  597369570-597369665 c
            306-398             JBITNF010000004.1  597369214-597369306 c
            399-480             JBITNF010000004.1  597368582-597368663 c
            481-542             JBITNF010000004.1  597368443-597368504 c
            543-727             JBITNF010000004.1  597368158-597368342 c
            728-905             JBITNF010000004.1  597367890-597368067 c
            906-949             JBITNF010000004.1  597367470-597367513 c
            950-965             JBITNF010000004.1  597367309-597367324 c
            966-967             "NN"               1-2
            968-1166            JBITNF010000004.1  597367110-597367308 c
            1167-1471           JBITNF010000004.1  597366324-597366628 c
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1471
                     /gene="LOC139903913"
                     /note="nucleosome assembly protein 1;2-like; The sequence
                     of the model RefSeq transcript was modified relative to
                     its source genomic sequence to represent the inferred CDS:
                     inserted 2 bases in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139903913"
     CDS             96..1238
                     /gene="LOC139903913"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: nucleosome assembly protein
                     1;2-like"
                     /protein_id="XP_071741938.1"
                     /db_xref="GeneID:139903913"
                     /translation="MSNNKKEQLDMSDLGASLPAAAAALSAEDRAGLVNALKNKLQNL
                     AGEHSDVLENLTPSVRKRVEVLRDIQSEHDEIEAKFFEERAALELKYQKLYEPLYSKR
                     YDIVNGVVEVDGVKDEAANDQSTDKEEKGVPDFWLTAMKTNEILAEEISERDEDALKY
                     LKDIKWCRMNDPKGFKLEFFFDTNPYFKNSVLTKVYHMIDDDEPILEKAIGTSIEWLP
                     GKCLTQKILKKKPKKGSKNAKPITKTEKCESFFNFFNPPQVPEDEDDIDEEAAEELQN
                     QMEQDYDVGSTIRDXIIPHAVSWFTGEAVEEDGFDGIEEDDEDDDGEDDEDLDDEDDE
                     DDEDEDDEDDEDEEESKSKRKPKKGSIPQGGATGEQGERPPECKQQ"
     misc_feature    276..1004
                     /gene="LOC139903913"
                     /note="Nucleosome assembly protein (NAP); Region: NAP;
                     pfam00956"
                     /db_xref="CDD:460010"
     polyA_site      1471
                     /gene="LOC139903913"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cccaaaacct cttccatcaa gggtttacac tattccacct cttcaacctc acttccaatt
       61 tctagggttt cattagggtt tccttttctc tcgccatgag caacaataag aaagagcagc
      121 tagacatgtc cgatctcggc gcttcgttac cggccgccgc cgccgcgctt agtgctgagg
      181 atcgtgctgg tctcgtaaac gccctcaaga ataaacttca aaatttagct ggggaacact
      241 ccgatgtact tgagaatttg actccgtcag ttaggaaaag agttgaggtt ttaagagata
      301 ttcagagcga acatgatgag atagaagcaa agttttttga agagagagca gcactggagt
      361 tgaaatatca gaaactgtat gagccattat actcaaagag atatgatatc gtgaatggtg
      421 ttgttgaagt cgatggtgta aaggatgaag ccgcaaatga ccagtcaact gataaagaag
      481 aaaagggtgt gcctgatttt tggctaactg caatgaagac caatgaaata ttggccgagg
      541 agatctcaga acgagatgaa gatgctctca aatatctgaa ggatattaag tggtgcagga
      601 tgaacgaccc taagggtttt aagcttgagt tcttttttga taccaatcca tattttaaga
      661 actcggtttt gacgaaagtg tatcatatga ttgatgacga tgagcctatt ctagagaagg
      721 caatagggac aagtatcgaa tggttaccag ggaaatgttt aacacagaag atcttaaaaa
      781 agaagcctaa gaaggggtca aagaacgcta agcctatcac aaagactgaa aagtgtgaaa
      841 gtttctttaa tttttttaac cctccacaag tacctgaaga tgaggacgat attgatgaag
      901 aggcggctga agaacttcag aatcaaatgg agcaagacta tgacgttggt tcaaccatac
      961 gagacnnaat aatccctcat gcagtttcct ggttcactgg tgaggctgtc gaagaggatg
     1021 ggtttgatgg tattgaagaa gacgatgaag atgatgacgg tgaagatgat gaagatcttg
     1081 atgatgaaga tgacgaggat gacgaagatg aagatgacga ggatgacgaa gatgaagagg
     1141 aaagcaagag taagaggaaa cccaagaagg gaagcattcc acaaggtggt gctaccggtg
     1201 aacagggtga acgacctcct gaatgcaagc aacagtaact cttttaagtg ttggtttcag
     1261 aattttggtc tattatcttt aagttcgttt tctttgtgta cgaggggagt cctatttaat
     1321 tgttaaaatg tcaagtttgt atgttaggtt atgatcttga ttgctctgaa gaacaatttg
     1381 aatatgtttt gtttgtttca tcttgttggg tatgtttctg aaacttctgt accatttttg
     1441 ttataattat tggatgtctt gccttttagt a
//
LOCUS       XR_011778593            1921 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903914), transcript variant X1, ncRNA.
ACCESSION   XR_011778593
VERSION     XR_011778593.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1921
                     /gene="LOC139903914"
                     /note="uncharacterized LOC139903914; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903914"
     ncRNA           1..1921
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903914"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139903914"
ORIGIN      
        1 aaaacattaa agagtttctg ttatatgtgt tgcgcatagt cggtaacttg gcttttgata
       61 agtgtggtct agggaaaatg gaactcatta cacgccaagt gctcgatgaa atgcgcaaat
      121 aaaatttgct ctaacattat gatgcttttt atagtgtttg gagttgactg aatataggaa
      181 gctatacaga ccatggcagg gcaacatctt atttgcagtc atgccaaatc attttctaat
      241 taaaattata tccaacgaaa gaaacaggtc aaatgatggc atggtgacct atgagttgca
      301 accattctga tctgttttct tctgcttgga aggatatatg ctataaccgt aattgctaca
      361 tcattattca ttatccttta atactaaatg taaaacccta ccgttttcag ggtaataata
      421 ttctgagata tcattttgcg tcggtttgag ccattcgtga taaacaagcc tgttaatagt
      481 ctgatgaaat ggaatatgaa taaactcgat gataaatatg tgttagcaac atttttgttg
      541 aacaacgtta tcaacaatag tacgtaaaag gctgtgatga taaatatgtg ggggattgat
      601 tgagtgacaa gaaaacatgg ctttgtttgt tggcggggca accaacgtat tgcagccata
      661 gcatattcat gtaaacatgg atttgtatct tggcggggca tcctacgttt tgcagccatg
      721 gcatttcatg tttggcaatc gttggttttg ctatttgttt ttgatttttt attttttagt
      781 tttcccgcgt tttgctcata tttgaacatt atgaatttgg cgattcattt tgtattctgg
      841 gagtaagtaa actgtttgtg gacacagcat aacaattcat cttctttctg ctcatttggt
      901 tgaaactgcc aacttccccc aaacgccgta atagagccgt ttaatgctac ctcaaacaat
      961 gttcttgaac cattgaatgc atcagatata tatatttagg atcgactttt agacaggtta
     1021 catgtacaac tcggcacagg agcatgaagc atggaaagtt agaaagatga ggcacaatat
     1081 ggacatacgg tgttgaattt gaatggatat tgttttagcg gagatgaaag tctgcgaaag
     1141 aatattccta atggcattct tctctaacat ttatttcact ggttcaagaa taagttgatt
     1201 ctactagagg tagcaatatc atctcagtta cctatgaatg ggttagattg gttgtgcttt
     1261 tatctctaac gttcatacaa gttgataggt gtattggtcc gtcacacatt gtgcttctct
     1321 taccatctcc agatgcagag acgctccaaa acagaacggt cccagcaatg gttgaagtat
     1381 ttgtgtggca tcttcaaaaa agaagaatat ctgtcaggat ggaactagac aaacatggta
     1441 ttgacctcaa cgcagatttg cctccaacat tggacattaa tgagttgctt cgtaggaatt
     1501 atcattcact atgtgacaac agactcaaac ctttttggga agcagtcatc ttgtccacat
     1561 gttactcagc ttagaagaat cgaaacaaca agttttttgg gaaaaacgta ttatcaattt
     1621 tggcaatttg agcgaaattt aactagagtt ttttgaatgg ttatcaagac gttcaaaggg
     1681 aacgattaat aattggcttt tgtggctttt atattcgaat tcgaaggata gtctatgctt
     1741 caatcgtatt ggtggtgttg gtttacatag aagttcattt gggtcataat tgtcgctatt
     1801 cgttctgtac gtaagttagg gctgctaggt gtattgtatt cagtctttta gcgtgtgcat
     1861 gagatattct cgtgtatctc ataatccttg tatcattgta cattggttgt gtttaactaa
     1921 t
//
LOCUS       XR_011778594            1231 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903914), transcript variant X2, ncRNA.
ACCESSION   XR_011778594
VERSION     XR_011778594.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1231
                     /gene="LOC139903914"
                     /note="uncharacterized LOC139903914; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903914"
     ncRNA           1..1231
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903914"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139903914"
ORIGIN      
        1 actatgtttg ggcagatgca aatcgaattg ggttacaaag aggaaaaata acgctccaaa
       61 tcaaaacctg aatagtcaga cccatcaatc gaattttgat acacatcagt tggatttgaa
      121 atcaaataaa atcaagtcat catcaatttg cagaaagttt gggttcttaa tttccagcat
      181 aacaattcat cttctttctg ctcatttggt tgaaactgcc aacttccccc aaacgccgta
      241 atagagccgt ttaatgctac ctcaaacaat gttcttgaac cattgaatgc atcagatata
      301 tatatttagg atcgactttt agacaggtta catgtacaac tcggcacagg agcatgaagc
      361 atggaaagtt agaaagatga ggcacaatat ggacatacgg tgttgaattt gaatggatat
      421 tgttttagcg gagatgaaag tctgcgaaag aatattccta atggcattct tctctaacat
      481 ttatttcact ggttcaagaa taagttgatt ctactagagg tagcaatatc atctcagtta
      541 cctatgaatg ggttagattg gttgtgcttt tatctctaac gttcatacaa gttgataggt
      601 gtattggtcc gtcacacatt gtgcttctct taccatctcc agatgcagag acgctccaaa
      661 acagaacggt cccagcaatg gttgaagtat ttgtgtggca tcttcaaaaa agaagaatat
      721 ctgtcaggat ggaactagac aaacatggta ttgacctcaa cgcagatttg cctccaacat
      781 tggacattaa tgagttgctt cgtaggaatt atcattcact atgtgacaac agactcaaac
      841 ctttttggga agcagtcatc ttgtccacat gttactcagc ttagaagaat cgaaacaaca
      901 agttttttgg gaaaaacgta ttatcaattt tggcaatttg agcgaaattt aactagagtt
      961 ttttgaatgg ttatcaagac gttcaaaggg aacgattaat aattggcttt tgtggctttt
     1021 atattcgaat tcgaaggata gtctatgctt caatcgtatt ggtggtgttg gtttacatag
     1081 aagttcattt gggtcataat tgtcgctatt cgttctgtac gtaagttagg gctgctaggt
     1141 gtattgtatt cagtctttta gcgtgtgcat gagatattct cgtgtatctc ataatccttg
     1201 tatcattgta cattggttgt gtttaactaa t
//
LOCUS       XM_071885838            1636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903915), mRNA.
ACCESSION   XM_071885838
VERSION     XM_071885838.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1636
                     /gene="LOC139903915"
                     /note="uncharacterized LOC139903915; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139903915"
     CDS             129..1316
                     /gene="LOC139903915"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741939.1"
                     /db_xref="GeneID:139903915"
                     /translation="MTTRGQFLPPGLVSNLQDALKKKQQANNHSVQDSDTDNNNNNNN
                     NDKDDESTVESSSNDNNENEFDPSKPVIFVTNSEGIDSPGLIYLIEALVQQGLYNVSV
                     CAPQFDKSLSGHSFSFQESIAVTTAEIKGATAFEVSGTPVDCVSLALSGALFAWSKPL
                     LVIVGVNKGPTFGHDMYSSSAIAGARQALISGIPSLSISLDWKKGESQENHFKDAVSV
                     CMPVIKAAIRDVEKGIFPKSSSLHITVPASPTENKGFKLTKRSCWKSKPIWQAIAANR
                     NPSASRFMVNQPGMGLQLAQLGRDASAAGAARRLNSQKQSLEVVESVGVSGKVDLTRI
                     VKYFRLEFQDSNEEDTDENLDFRALQDGFVSVTPMSVTTVIEPDIEKATSEWISDAIK
                     TDD"
     misc_feature    342..905
                     /gene="LOC139903915"
                     /note="Survival protein SurE; Region: SurE; pfam01975"
                     /db_xref="CDD:460400"
ORIGIN      
        1 tctgtctatc cctcccttac atcatcaatc ataccccttt ttctctctag ggtttgattt
       61 ctttcccctt aaatccatat ttttcttcat attttatatt tttgtttttg tatctaaaat
      121 ataatataat gacgacccgt ggtcagttct tacctcctgg tttggtttcg aatctacaag
      181 atgctttaaa gaaaaaacaa caagcaaaca atcattctgt tcaagattct gatacagata
      241 acaataataa taataataat aatgataaag atgatgaatc aactgttgaa tcttcatcta
      301 atgataataa tgaaaatgaa tttgatcctt caaagcctgt aatttttgtt acaaatagtg
      361 aaggaattga ttcacctggt cttatttatc taattgaagc acttgttcaa caaggccttt
      421 ataatgtcag tgtttgtgct cctcaattcg ataaatcgtt atctggtcac tcgttttcgt
      481 ttcaagaatc gattgccgtt accacagctg aaattaaagg tgccactgct tttgaggttt
      541 cgggtacacc tgtagattgt gtttcattgg cattatctgg ggcgttgttt gcgtggtcaa
      601 agccactttt ggtgattgtt ggggtcaata aaggtccaac ctttggccat gatatgtatt
      661 cgtcgagtgc tatagctgga gctaggcaag ccttaattag tggtataccc tccttatcaa
      721 tctcgctaga ctggaaaaaa ggtgaaagtc aagaaaatca tttcaaggat gcggtgtctg
      781 tttgtatgcc cgtaataaaa gcagccatta gagatgttga aaaaggcatt ttccccaaaa
      841 gttcatcatt acatataact gttcctgcat cccctacaga gaacaaggga tttaagttaa
      901 caaagcgaag ttgttggaag tcgaaaccaa tttggcaagc aattgcagcc aacaggaacc
      961 cttcggcttc acgttttatg gtgaatcaac caggcatggg tttgcagctt gcgcagcttg
     1021 gccgagatgc atccgcagca ggtgcagctc gacggttaaa ctcacaaaag cagagcttgg
     1081 aggttgttga atcagttggt gtatcaggaa aagttgacct cactagaata gtcaaatact
     1141 tcaggctaga gtttcaagac tctaatgagg aagacacaga tgagaatctt gattttagag
     1201 ctcttcaaga cggatttgtt tctgttacgc caatgtccgt tactacggtg attgagccag
     1261 acatagaaaa agccacatct gaatggattt ctgatgcgat taaaactgat gactgaagtg
     1321 cagtcatggt gtatgtatat tttgaggtgc aacttggtat tcagccttta gcattttata
     1381 taaaggaatt ggcattattt atgggtttgt gttgttaagg tagatttttc aactttattt
     1441 aatttatttt gggtgggaaa aactatcacc tctacattgt gtggcatttt gtgaaggacc
     1501 tttctgtcct tttgattatt tattgctggc aaagttgtca ccaattcgct tttgtttttt
     1561 aaagtagtag ttacttttat ttgaattgta gttttgtagt tgtttcttgt ctacgtggat
     1621 atacataccg cttaat
//
LOCUS       XM_071885839             728 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides B3 domain-containing protein
            Os06g0194400-like (LOC139903916), transcript variant X1, mRNA.
ACCESSION   XM_071885839
VERSION     XM_071885839.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..728
                     /gene="LOC139903916"
                     /note="B3 domain-containing protein Os06g0194400-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139903916"
     CDS             1..705
                     /gene="LOC139903916"
                     /codon_start=1
                     /product="B3 domain-containing protein Os06g0194400-like
                     isoform X1"
                     /protein_id="XP_071741940.1"
                     /db_xref="GeneID:139903916"
                     /translation="MVVSKKSYEDLRKQRLEENKKRMEQLNIPHLTQALKTAHSPMKR
                     TKPRAIGTEIVVVRRSSRVASLPAPVYKEHGLKTFEILELPRCGRKYRYVRKELGNRV
                     YASDEAREYAINKAEELESKLKSGHLSFIKPMFQSYVTGGWLGLPVNFCRKYLPKNDE
                     TIILIDEDGQQFPTLYFSRKEALSAGWRGFSVSHELIDGDALVFHLIKRAVFKVYIIR
                     NKDYYADGELNDASHA"
     misc_feature    385..654
                     /gene="LOC139903916"
                     /note="Plant-specific B3-DNA binding domain; Region:
                     B3_DNA; cd10017"
                     /db_xref="CDD:197383"
     misc_feature    order(394..396,403..405,424..426,433..435,439..441,
                     523..525,544..546,550..555,559..564)
                     /gene="LOC139903916"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:197383"
ORIGIN      
        1 atggtggtat caaagaaaag ctatgaggat ttacgtaaac aaaggttgga agaaaacaaa
       61 aagaggatgg aacaacttaa cattcctcac ctcactcaag ctctcaaaac cgctcactct
      121 ccgatgaaac gaacaaaacc tcgtgccatc gggacagaaa ttgtggtggt taggaggtcc
      181 agtcgtgttg caagtttgcc tgcacctgtt tataaggaac atgggcttaa aacttttgag
      241 atacttgagt taccaaggtg tggaagaaag tataggtatg tacgaaagga gttgggaaac
      301 cgagtttacg catctgatga agctagagaa tacgctataa acaaagccga agaacttgaa
      361 tctaaactta aaagtggcca tctgtcattt attaaaccca tgtttcagtc atacgtgact
      421 ggtggatggc tgggtctacc agttaatttc tgcagaaaat atctaccgaa gaatgatgaa
      481 accatcattt taattgatga agacggtcaa cagtttccaa cgctttattt ttcacgtaaa
      541 gaagcgctta gtgctggatg gagagggttt tcagttagtc atgaattaat tgatggagat
      601 gcactcgtct ttcatttaat caaacgcgct gtctttaagg tatatattat aaggaacaaa
      661 gattattatg ctgatggtga attgaatgat gcttcccatg cttgagtata tccaccaatt
      721 aaacaaag
//
LOCUS       XM_071885840             692 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides B3 domain-containing protein
            Os06g0194400-like (LOC139903916), transcript variant X2, mRNA.
ACCESSION   XM_071885840
VERSION     XM_071885840.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..692
                     /gene="LOC139903916"
                     /note="B3 domain-containing protein Os06g0194400-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139903916"
     CDS             34..669
                     /gene="LOC139903916"
                     /codon_start=1
                     /product="B3 domain-containing protein Os06g0194400-like
                     isoform X2"
                     /protein_id="XP_071741941.1"
                     /db_xref="GeneID:139903916"
                     /translation="MEQLNIPHLTQALKTAHSPMKRTKPRAIGTEIVVVRRSSRVASL
                     PAPVYKEHGLKTFEILELPSGRKYRYVRKELGNRVYASDEAREYAINKAEELESKLKS
                     GHLSFIKPMFQSYVTGGWLGLPVNFCRKYLPKNDETIILIDEDGQQFPTLYFSRKEAL
                     SAGWRGFSVSHELIDGDALVFHLIKRAVFKVYIIRNKDYYADGELNDASHA"
     misc_feature    349..618
                     /gene="LOC139903916"
                     /note="Plant-specific B3-DNA binding domain; Region:
                     B3_DNA; cd10017"
                     /db_xref="CDD:197383"
     misc_feature    order(358..360,367..369,388..390,397..399,403..405,
                     487..489,508..510,514..519,523..528)
                     /gene="LOC139903916"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:197383"
ORIGIN      
        1 cgtaaacaaa ggttggaaga aaacaaaaag aggatggaac aacttaacat tcctcacctc
       61 actcaagctc tcaaaaccgc tcactctccg atgaaacgaa caaaacctcg tgccatcggg
      121 acagaaattg tggtggttag gaggtccagt cgtgttgcaa gtttgcctgc acctgtttat
      181 aaggaacatg ggcttaaaac ttttgagata cttgagttac caagtggaag aaagtatagg
      241 tatgtacgaa aggagttggg aaaccgagtt tacgcatctg atgaagctag agaatacgct
      301 ataaacaaag ccgaagaact tgaatctaaa cttaaaagtg gccatctgtc atttattaaa
      361 cccatgtttc agtcatacgt gactggtgga tggctgggtc taccagttaa tttctgcaga
      421 aaatatctac cgaagaatga tgaaaccatc attttaattg atgaagacgg tcaacagttt
      481 ccaacgcttt atttttcacg taaagaagcg cttagtgctg gatggagagg gttttcagtt
      541 agtcatgaat taattgatgg agatgcactc gtctttcatt taatcaaacg cgctgtcttt
      601 aaggtatata ttataaggaa caaagattat tatgctgatg gtgaattgaa tgatgcttcc
      661 catgcttgag tatatccacc aattaaacaa ag
//
LOCUS       XM_071885841            1904 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides casein kinase 1-like protein
            2 (LOC139903918), mRNA.
ACCESSION   XM_071885841
VERSION     XM_071885841.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1904
                     /gene="LOC139903918"
                     /note="casein kinase 1-like protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 64 Proteins"
                     /db_xref="GeneID:139903918"
     CDS             173..1570
                     /gene="LOC139903918"
                     /codon_start=1
                     /product="casein kinase 1-like protein 2"
                     /protein_id="XP_071741942.1"
                     /db_xref="GeneID:139903918"
                     /translation="MEPRVANKFRLGRKIGSGSFGEIYLGTNIQSNEEVAIKLENIKT
                     KHPQLLYESKLYKILQGGTGIPNVRWYGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSL
                     KTVLMLADQMINRVEFIHCKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSS
                     THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA
                     GNKKQKYEKISEKKVSTSIESLCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDL
                     FIREGFQFDYIFDWTILKYQQSQLANPPSRGLGAGAGTSSGVPPVAANLNRLSGGEDA
                     RPSGWSSANPSRPRNAMPFNSGTLSKHKNPASSDPSMSRELSSSHILQSSGSSRRPVV
                     SSSRDPMLTGGDPDSSNRRTTDASPSAFRRVTSTGQRSSPVVSSDQKRTSKNASPTNI
                     KNFESTLKGIEGLHF"
     misc_feature    194..1018
                     /gene="LOC139903918"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinases, Casein Kinase 1 delta and epsilon; Region:
                     STKc_CK1_delta_epsilon; cd14125"
                     /db_xref="CDD:271027"
     misc_feature    order(215..235,239..241,278..280,284..286,416..430,
                     434..436,440..442,554..556,560..562,566..571,575..577,
                     617..619,626..628,695..706)
                     /gene="LOC139903918"
                     /note="active site"
                     /db_xref="CDD:271027"
     misc_feature    order(215..235,239..241,278..280,284..286,416..430,
                     560..562,566..571,575..577,617..619)
                     /gene="LOC139903918"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271027"
     misc_feature    order(227..229,434..436,440..442,554..556,560..562,
                     566..568,626..628,695..706)
                     /gene="LOC139903918"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:271027"
     misc_feature    order(614..646,650..706)
                     /gene="LOC139903918"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:271027"
     polyA_site      1904
                     /gene="LOC139903918"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacttgacct aatattttaa gctcactgtt catggcggtc ggtggtggat gacgtggact
       61 tccggttcgt ctcgatttac tggttctcta atgaggcgat aatcggattc cgtactattg
      121 tttacattct cgttggtttt gtgaattagg gtttataatt tcgtgaaacc taatggagcc
      181 tcgtgtggct aataagtttc gattagggcg taagatcggc agtggctctt ttggagagat
      241 ctacttaggt actaatattc agtcgaatga agaagttgct attaaactgg aaaatatcaa
      301 aacaaaacat ccacagttgt tatatgaatc aaaactgtac aagatactac aaggaggaac
      361 tggaatacca aatgtaagat ggtatggcgt tgaaggagac tacaatgttc ttgtgatgga
      421 tttattggga ccgagcctgg aagatttgtt taatttctgt agtaggaagt tatctttgaa
      481 aactgttctc atgcttgcag atcagatgat caaccgtgtt gaatttattc actgtaaatc
      541 atttttacat cgggatatta agccagacaa ctttcttatg ggtttaggga ggcgtgctaa
      601 tcaggtctac gctattgact ttgggctagc caagaaatac agggactctt caactcatca
      661 gcacattcct tatagagaaa acaagaactt aacggggaca gctagatatg ctagcatgaa
      721 cactcacctt ggaattgagc aaagcagaag agatgacttg gaatcgcttg gatatgttct
      781 catgtacttc ttacgaggaa gtcttccctg gcagggactg aaagcaggga acaagaaaca
      841 gaagtatgaa aaaatcagtg agaagaaagt ttctacctct attgagtctt tatgccgggg
      901 ctaccctaca gagtttgcat cgtatttcca ttattgccgt tcattaagat ttgacgataa
      961 gccggattat gcatatctga aaaggatctt ccgtgatctt ttcattcgtg aaggttttca
     1021 gtttgactac atatttgatt ggactattct caagtatcag caatcacagc ttgcaaatcc
     1081 tccatcgcgc ggtcttggtg ctggtgctgg tacaagttct ggtgttcctc ctgtggctgc
     1141 caatctgaat aggctatcag gtggtgaaga tgccaggcct tctggttggt cctctgcaaa
     1201 tccatcccgc cctaggaatg cgatgccgtt caattccggg acactttcta aacacaaaaa
     1261 ccccgcatcc agtgatccgt ccatgagtcg agagttgtct agttctcata ttttgcaatc
     1321 aagtggatct tcaagacggc ctgttgtctc tagcagccgt gatccaatgc taacaggtgg
     1381 tgaccccgat tcttcaaaca ggcgcaccac agatgcaagt cctagtgcct ttcgccgggt
     1441 cacaagtact ggtcaaagga gctcacccgt tgtatcctca gatcagaaac gtactagtaa
     1501 aaatgcgtcc cccactaaca taaagaactt tgaatcaact ctcaagggta tcgagggtct
     1561 gcatttctaa acaggatcga tcgaaacagg tttgcttcat ttgctcatca cccatggctc
     1621 ctgcaccatg taaatttgat tttcaaaagc aaagcacttt ggatacaaaa tgtgttgtta
     1681 cagcccatgc aataacaaaa gaggtcttgg atataagtct cggatatcat ttacaaacct
     1741 tttcagccca ttttcgttct taaagcccca aatatgtttt tcgatacctg tggttttgtg
     1801 gatactgaaa agatgctatg ttgtggatat ttaccttgta atatggtttt caaccattgt
     1861 atgattttta ttgatttgtc atgggacaag tgttgtttgt ggtt
//
LOCUS       XM_071885842            2065 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dihydrolipoyllysine-residue
            acetyltransferase component 2 of pyruvate dehydrogenase complex,
            mitochondrial-like (LOC139903919), transcript variant X1, mRNA.
ACCESSION   XM_071885842
VERSION     XM_071885842.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2065
                     /gene="LOC139903919"
                     /note="dihydrolipoyllysine-residue acetyltransferase
                     component 2 of pyruvate dehydrogenase complex,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139903919"
     CDS             113..1762
                     /gene="LOC139903919"
                     /codon_start=1
                     /product="dihydrolipoyllysine-residue acetyltransferase
                     component 2 of pyruvate dehydrogenase complex,
                     mitochondrial-like"
                     /protein_id="XP_071741943.1"
                     /db_xref="GeneID:139903919"
                     /translation="MTFASHIFRHSKQLRSVPRQDHATLVRWFTHSSRPISSKGDDMS
                     KLRQIKNENICRCKSCSGSMTSTPMLTRGYRAVNPTKVSNGFAKAEVTSFNGMVVSRG
                     ISCSDVQLKRSFSTSGLPPHQELGMPSLSPTMTEGNIARWLKKEGDQVAPGEVLCEVE
                     TDKATVEMECMEEGYLAKIIHGDGAKEIKVGEVIAITVEEKDDIEKFKDYKPQSSDGA
                     TPQDSQPSTPAKEEVVEKPSTAPEPKAAKPSTAPPTDRVFASPLARKLAEDNNVSLSS
                     IKGTGPEGSIVKADIEEYLASGKKELSAAPSKTDQATVSAINYTDIPNSQIRKVTASR
                     LLLSKQTIPHYYLTVDTCVDKLTKLRADLNLLQEASGGKKISINDLVIKAAALALRKV
                     PQCNSSWTNDYIRQFHEVHINVAVQTDNGLFVPVIRNADKKGLSTISEDVKNLAKKAR
                     ENSLKPADYEGGTFTVSNLGGPFGIKQFCAIINPPQAGILAVGSAERRVIPGSGVGEF
                     NFASYMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPETMLL"
     misc_feature    116..1759
                     /gene="LOC139903919"
                     /note="dihydrolipoyllysine-residue acetyltransferase
                     component of pyruvate dehydrogenase complex; Region:
                     PLN02744"
                     /db_xref="CDD:215397"
     polyA_site      2065
                     /gene="LOC139903919"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tattcttatt gttagcccta gacagaatcc atacaaatat atacatacaa atctccatta
       61 tatattcctt gcatccacga ctgccgtacg ccattttctc cggcgaataa tcatgacttt
      121 tgcatctcac atcttccgtc actctaaaca gttgagaagt gttcctcggc aggatcatgc
      181 tactttggtg cggtggttta cgcatagtag tcgccctatt tctagcaaag gggacgatat
      241 gtctaagctc cgtcagatta agaatgagaa tatttgtaga tgcaagtctt gcagtggatc
      301 catgacaagt actcccatgt taactcgagg ttatagggca gtcaatccaa caaaggtatc
      361 aaatggtttt gctaaagcgg aagtaacctc atttaatgga atggtggtta gtagaggaat
      421 ttcttgctct gatgtgcaac ttaagagaag cttttcaaca tcaggtcttc ccccgcacca
      481 agagttaggg atgccttccc tttcacctac aatgaccgag ggaaacatag cgcgctggtt
      541 aaagaaagaa ggagaccaag ttgcacctgg tgaagtactt tgtgaagtcg agactgataa
      601 agccactgta gaaatggaat gtatggagga agggtatcta gctaagatta tacatggcga
      661 tggagcgaaa gaaatcaaag ttggcgaggt gattgcgata actgttgaag agaaggatga
      721 tattgaaaaa ttcaaagatt acaaacccca gtcatcagat ggtgcaaccc cacaagattc
      781 tcaaccatct actcctgcca aggaagaagt agtcgagaag ccaagcaccg caccagaacc
      841 aaaggctgca aagccaagta cagctccacc aacagatcgc gtttttgcta gtcctcttgc
      901 aagaaagttg gctgaagata acaatgtctc tctttcaagt atcaaaggta caggtcctga
      961 aggaagcatt gtgaaggcgg acattgaaga atacttggct tctggtaaga aagaactttc
     1021 agctgcacca tccaagactg atcaagcaac agtttctgct ataaattaca ctgatattcc
     1081 aaattctcag ataagaaagg tcacagcttc acgcttgttg ctgtcgaagc aaaccattcc
     1141 tcattattat ctaactgtag atacatgtgt tgacaaactt acaaaattgc gtgcggatct
     1201 caatttacta caagaagctt caggtgggaa gaagatatcc attaatgatc ttgtgatcaa
     1261 ggctgcggca ttggcccttc gtaaagttcc ccaatgtaat agttcatgga ctaatgatta
     1321 tattcgccag tttcatgaag tgcacatcaa tgtggctgtg cagactgata atggactctt
     1381 tgtcccagtc ataaggaatg ctgataagaa aggcttgtca acaatctcag aggatgtaaa
     1441 gaatttagca aagaaagcta gagagaacag cttaaaacca gctgattatg agggaggtac
     1501 attcacagtt tcaaatctag ggggaccgtt tgggatcaag cagttttgtg ccatcataaa
     1561 tccaccgcag gccggtattc tagcagttgg atctgccgag aggagagtta ttcctggttc
     1621 aggcgttgga gaattcaatt tcgcatcata catgtctgtc acattgagtt gtgatcaccg
     1681 tgtgattgat ggtgctattg gtgcagaatg gctaaaagca ttcaaaggct acatcgagaa
     1741 tccagagaca atgctgcttt aaatataatt tcttttcttt gaattttaca gttatcaatt
     1801 tctttttagg gactcgcgtg ttgtttcacg gagttatact ggctttttgt tgatcacatg
     1861 atgaaatatt gtttccaaat aagaaaaagg gaggtcgtcg cgatttgagg catgaaaaca
     1921 tggactcggt tttggtcatg tatagagtta acattcatct cttatgtgcg gaaaagaatt
     1981 cagtttggtt cttgcactca catgtaaacc taaataaacc taattttttg gtttcatgta
     2041 attgattggt tggtgtgatc atctt
//
LOCUS       XR_011778595            2256 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dihydrolipoyllysine-residue
            acetyltransferase component 2 of pyruvate dehydrogenase complex,
            mitochondrial-like (LOC139903919), transcript variant X2, misc_RNA.
ACCESSION   XR_011778595
VERSION     XR_011778595.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2256
                     /gene="LOC139903919"
                     /note="dihydrolipoyllysine-residue acetyltransferase
                     component 2 of pyruvate dehydrogenase complex,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139903919"
     misc_RNA        1..2256
                     /gene="LOC139903919"
                     /product="dihydrolipoyllysine-residue acetyltransferase
                     component 2 of pyruvate dehydrogenase complex,
                     mitochondrial-like, transcript variant X2"
                     /db_xref="GeneID:139903919"
ORIGIN      
        1 tattcttatt gttagcccta gacagaatcc atacaaatat atacatacaa atctccatta
       61 tatattcctt gcatccacga ctgccgtacg ccattttctc cggcgaataa tcatgacttt
      121 tgcatctcac atcttccgtc actctaaaca gttgagaagt gttcctcggc aggatcatgc
      181 tactttggtg cggtggttta cgcatagtag tcgccctatt tctagcaaag gggacgatat
      241 gtctaagctc cgtcagatta agaatgagaa tatttgtaga tgcaagtctt gcagtggatc
      301 catgacaagt actcccatgt taactcgagg ttatagggca gtcaatccaa caaaggtatc
      361 aaatggtttt gctaaagcgg aagtaacctc atttaatgga atggtggtta gtagaggaat
      421 ttcttgctct gatgtgcaac ttaagagaag cttttcaaca tcaggtcttc ccccgcacca
      481 agagttaggg atgccttccc tttcacctac aatgaccgag ggaaacatag cgcgctggtt
      541 aaagaaagaa ggagaccaag ttgcacctgg tgaagtactt tgtgaagtcg agactgataa
      601 agccactgta gaaatggaat gtatggagga agggtatcta gctaagatta tacatggcga
      661 tggagcgaaa gaaatcaaag ttggcgaggt gattgcgata actgttgaag agaaggatga
      721 tattgaaaaa ttcaaagatt acaaacccca gtcatcagat ggtgcaaccc cacaagattc
      781 tcaaccatct actcctgcca aggaagaagt agtcgagaag ccaagcaccg caccagaacc
      841 aaaggctgca aagccaagta cagctccacc aacagatcgc gtttttgcta gtcctcttgc
      901 aagaaagttg gctgaagata acaatgtctc tctttcaagt atcaaaggta caggtcctga
      961 aggaagcatt gtgaaggcgg acattgaaga atacttggct tctggtaaga aagaactttc
     1021 agctgcacca tccaagactg atcaagcaac agtttctgct ataaattaca ctgatattcc
     1081 aaattctcag ataagaaagg tcacagcttc acgcttgttg ctgtcgaagc aaaccattcc
     1141 tcattattat ctaactgtag atacatgtgt tgacaaactt acaaaattgc gtgcggatct
     1201 caatttacta caagaagctt caggtgggaa gaagatatcc attaatgatc ttgtgatcaa
     1261 ggctgcggca ttggcccttc gtaaagttcc ccaatgtaat agttcatgga ctaatgatta
     1321 tattcgccag tttcatgaag tgcacatcaa tgtggctgtg cagactgata atggactctt
     1381 tgtcccagtc ataaggaatg ctgataagaa aggcttgtca acaatctcag aggatgtaaa
     1441 gaatttagca aagaaagcta gagagaacag cttaaaacca gctgattatg agggaggtac
     1501 attcacagtt tcaaatctag ggggaccgtt tgggatcaag cagttttgtg ccatcataaa
     1561 tccaccgcag gccggtattc tagcagttgg atctgccgag aggagagtta ttcctggttc
     1621 aggcgttgga gaattcaatt tcgcatcata catgtctgtc acattgagtt gtgatcaccg
     1681 tgtgattgat ggtgctattg gtgcagaatg gctaaaagca ttcaaaggct acatcgagaa
     1741 tccagagaca atgctgcttt aaatataatt tcttttcttt gaattttaca gttatcaatt
     1801 tctttttagg gactcgcgtg ttgtttcacg gagttatact ggctttttgt tgatcacatg
     1861 atgaaatatt gtttccaaat aagaaaaagg gaggtcgtcg cgatttgagg catgaaaaca
     1921 tggactcggt tttggtcatg tatagagtta acattcatct cttatgtgcg gaaaagaatt
     1981 cagtttggtt cttgcactca catactaaat tctaaactca accctaggga cgagattttg
     2041 atgttggttc gatggtaccg ttaacattgt cgcaaattgg gattcctcct aacgtttgtg
     2101 tgatcgcgaa ggtggtcaag cccctttctg gtgatgccaa tatcgctgtt cgaaaaagaa
     2161 aaagagcaag ttaggtttat ctatatatac ggttttatca tttaaacttt gtcatgctga
     2221 atattgacaa ctaatttgaa ttattgaata attgga
//
LOCUS       XM_071885844            1002 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitochondrial import inner
            membrane translocase subunit TIM23-1-like (LOC139903920), mRNA.
ACCESSION   XM_071885844
VERSION     XM_071885844.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1002
                     /gene="LOC139903920"
                     /note="mitochondrial import inner membrane translocase
                     subunit TIM23-1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 19 Proteins"
                     /db_xref="GeneID:139903920"
     CDS             161..733
                     /gene="LOC139903920"
                     /codon_start=1
                     /product="mitochondrial import inner membrane translocase
                     subunit TIM23-1-like"
                     /protein_id="XP_071741945.1"
                     /db_xref="GeneID:139903920"
                     /translation="MSYIPQSPNQNRNDDDNHNRRLYNPYQDLGIPVQNLYKLPTSPE
                     FLFQEESVAQRRSWGENLTYYTGIGYLGGAVYGAGLGFKKGVKEFEPGDTTKLRVNRI
                     LNNSGASGRSIGNTAGVIGLLYAGLESGMVAIRDTDDIINSVVAGLATGAVYKAASGV
                     RSAAVGGIVGGVAVGLAVSGKQVLKRYVPI"
     misc_feature    266..646
                     /gene="LOC139903920"
                     /note="Mitochondrial import inner membrane translocase,
                     subunit TIM22 [Posttranslational modification, protein
                     turnover, chaperones]; Region: TIM22; cl02381"
                     /db_xref="CDD:470560"
ORIGIN      
        1 ccggtctaac acctgaccac aaggaaaacc agaaaaagga accttctcgt ggaaccgaga
       61 gcctccctct ttctctggtt ttttttacca ccgcctcctc tccccatttt cttccaatta
      121 aattcaccca aatcaaaacc ctaaccctaa ttccgtcgtc atgtcataca taccacaatc
      181 accaaatcaa aaccgaaacg acgacgacaa ccacaaccgt cgtctataca acccctatca
      241 agatctcgga atccctgtac aaaacctata caaacttccg acatcacctg aattcctttt
      301 tcaagaagaa tccgtcgcac aacgtcgttc atggggcgaa aacctaactt attacaccgg
      361 gatcggttac cttggtggcg ccgtctacgg cgccggtcta ggttttaaaa aaggtgttaa
      421 ggaattcgaa cctggtgaca ctacgaaact tagggttaat cggatcttaa ataattcagg
      481 cgctagtgga cggagtattg gaaacactgc cggtgtgatt ggattgttgt atgcaggtct
      541 tgagagtggt atggttgcta ttagggatac tgatgatata attaacagtg tggtggctgg
      601 tttggcgact ggtgcggttt ataaggcggc gtccggtgtt cgttctgcgg ctgttggcgg
      661 aatcgttggt ggtgttgcgg ttgggttagc ggtttctggg aagcaggttt tgaagagata
      721 tgtaccaatt tgaggttgat tggttaattt ttactttaat tcaaaagttt tgatgatgat
      781 tttatattat atatacaaga atgtttgttt cggcatggga aaaatatgct taattttggg
      841 ttttgtgtaa ttttgatgcc tttcttgtta tgttgtgttc tgtatcagtg tatcactgtg
      901 tcaggatggg ttagtcacaa ataaattcat tctcgtagac gtttgattcg aaattgtatt
      961 acaggtttta tgtaacttgt ttggttagga tattgtttgt tc
//
LOCUS       XM_071885845             917 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phragmoplastin DRP1E-like
            (LOC139903922), mRNA.
ACCESSION   XM_071885845
VERSION     XM_071885845.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..917
                     /gene="LOC139903922"
                     /note="phragmoplastin DRP1E-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903922"
     CDS             542..901
                     /gene="LOC139903922"
                     /codon_start=1
                     /product="phragmoplastin DRP1E-like"
                     /protein_id="XP_071741946.1"
                     /db_xref="GeneID:139903922"
                     /translation="MDKGINGLDHLEPVIKEKVPDIGSLLNKNIYMMEAELDRIGRPV
                     AVDAGSQLYTILELCRAFNKIFNKNLNGGFHDPWHIFSRVLLSHIKTIIETEGRAKSS
                     GSEVSSPDGKNEYLWYD"
     misc_feature    <584..>862
                     /gene="LOC139903922"
                     /note="Dynamin central region; Region: Dynamin_M;
                     pfam01031"
                     /db_xref="CDD:460033"
ORIGIN      
        1 ttaacgtttg ttacagcatc tcttttgatc ggaggaaccg tacgaatcgg agaagtcaac
       61 ttctgagttc gtggggtttc tattcgtttc tgatttttgt gcatccgaag tcgtatacta
      121 aagatccttt ctcatatttt agggtttgta aattattttc tacggagtat ttacttacca
      181 tttaatttat taatcatcac ggcaactaag gacaatcgta tacaaagatt tcgtgatttt
      241 tctagtaatc tcttttttta tctcaacata tttttttttt tggtaagcga ggaaactcta
      301 ctaggaacca tagatcacat tggctcccgt agaaggtaaa aactcgggta atcaagcccc
      361 cgagcgcgag acttgatacc gggtgaattg cattatgcgc accctctagt caccgagagt
      421 ggccactcag acaagcctag tttgtttttt tgtttttgtt tttttttttt tttttttttt
      481 tttttatctc aacattcaac aacaacacta ggtgaacggg catttggggt tgtgacatcc
      541 gatggacaaa ggaattaatg gtttggatca tttggaacct gtaatcaaag aaaaagtacc
      601 ggatatcggt tctttgttaa acaaaaatat ttatatgatg gaagccgagt tggaccgtat
      661 tgggaggcca gttgcagttg atgctggatc tcagctgtat accatcttgg aactttgtcg
      721 tgctttcaac aaaatcttca acaagaattt aaatgggggg tttcacgatc catggcatat
      781 attctcaaga gtgttacttt cacatattaa aacgataata gaaactgaag gccgggcaaa
      841 atcaagtggt tcggaggtat cttcacctga tggcaaaaac gaatatcttt ggtatgacta
      901 atgatttatc caaatta
//
LOCUS       XM_071885846            1023 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides PHD finger protein
            ALFIN-LIKE 4-like (LOC139903923), mRNA.
ACCESSION   XM_071885846
VERSION     XM_071885846.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1023
                     /gene="LOC139903923"
                     /note="PHD finger protein ALFIN-LIKE 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 51 Proteins"
                     /db_xref="GeneID:139903923"
     CDS             138..878
                     /gene="LOC139903923"
                     /codon_start=1
                     /product="PHD finger protein ALFIN-LIKE 4-like"
                     /protein_id="XP_071741947.1"
                     /db_xref="GeneID:139903923"
                     /translation="MDGGGNYNPRTVDEVFKDFKGRRAGLIKALTTDVAEFYQKCDPE
                     KENLCLYGFPNEQWEVNFPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWL
                     LSVSFYFGARFGFDKSDRKWLFNMINDLPTIFEVVNGIAKNNQKVKSTVSNNSSTKSK
                     SNSKRQAPPREEDDLDDDDDDEDDDDEHGETLCGICGENYASNEFWICCDICETWFHG
                     KCVRITPAKAANIKHYKCPSCSHKKPRP"
     misc_feature    171..554
                     /gene="LOC139903923"
                     /note="Region: Alfin; pfam12165"
                     /db_xref="CDD:463480"
     misc_feature    711..863
                     /gene="LOC139903923"
                     /note="PHD finger found in plant Alfin1-like (AL)
                     proteins; Region: PHD_AL_plant; cd15613"
                     /db_xref="CDD:277085"
     misc_feature    order(750..767,774..776,780..782,789..791)
                     /gene="LOC139903923"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:277085"
ORIGIN      
        1 catcatctac gtgtctattt cttctctaaa tttacttcac tctactacca gtctaatact
       61 caatttctac atcttgcaat ttcacaccga ttaaaattac ttcgtttttt taaattaatc
      121 ataacaaaaa ataaaaaatg gacggtggag ggaattataa tcctcgcaca gttgatgaag
      181 tttttaagga tttcaaaggc cgccgtgccg gtttaatcaa agctcttacc actgatgttg
      241 cagagtttta ccagaagtgt gatcctgaaa aggagaattt gtgtctgtat ggctttccta
      301 atgagcagtg ggaagtgaat tttcctgctg aagaggtgcc tcccgaactc cctgaaccag
      361 cactgggaat caattttgca agagatggta tgcaagaaaa agactggtta tctttagttg
      421 ctgttcatag tgacgcttgg ttactttccg tttcctttta ttttggtgcc agatttggct
      481 ttgacaaatc ggacaggaaa tggctcttca atatgataaa tgatctccca acaatattcg
      541 aagttgtgaa tggtattgca aagaacaacc agaaagtgaa atcaacagtt tcaaacaaca
      601 gtagcaccaa atccaaatca aactcgaagc gacaagcacc accaagagaa gaagacgatt
      661 tggatgatga tgatgacgat gaagatgatg atgatgagca tggtgaaacg ttatgtggga
      721 tatgcgggga aaattacgca tcaaatgagt tctggatatg ttgtgatatt tgcgagacat
      781 ggtttcatgg caaatgtgtg aggatcacac cagcaaaagc agctaacatc aagcattaca
      841 agtgcccgtc ttgcagccac aagaaacctc gaccttgatt atgactggat caatattatg
      901 tttactgtta gctggtctgt taattgactt tggttaatcc tgtttactgt atgcttttaa
      961 aaatttgatc tcagttggcg tattacttgg tgtcagtaat ataagagtag tatcttaatc
     1021 atc
//
LOCUS       XM_071885847            2549 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein-interacting protein 3-like (LOC139903924), transcript
            variant X1, mRNA.
ACCESSION   XM_071885847
VERSION     XM_071885847.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2549
                     /gene="LOC139903924"
                     /note="polyadenylate-binding protein-interacting protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139903924"
     CDS             350..2155
                     /gene="LOC139903924"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 3-like isoform X1"
                     /protein_id="XP_071741948.1"
                     /db_xref="GeneID:139903924"
                     /translation="MNPHQVAQPRSSSNGFNRGRGEKETGTRLGSKSQPGKVNYNKSS
                     TSAYSGVQAGNKGGVESPSRERLVYVTTCLIGHQVEVQVIDGSVYSGIFHATDVRKDF
                     GIILKMARVTKAGSSRGQKNISDSVQKPPSKILIIPAKDLVQIVAKSVSITRDGLVNE
                     LQHDQLHDIMIDSSISQSRHVDLERELEPWVPDDDNPVCPELDNTFDRHWNRGWNQFE
                     ANAALFGVTSTFDEELYTTKLVRGPQMIEREREALRIAREIEGEDTQDLHLAEERGIH
                     FHEKFDLDEETKYSSVFRGVDDSGYDEDEDVLDSQNNETFGDVSDSIMNKSFSEALQV
                     EAQRSLLSTSSDIHPSGSMDGQSRIQDYQTNQHAGSNYSKEDKENKTVCDQSQASKLK
                     ELPNNVSGNNEPPASATAKAQEKTSSSDKAEVASATFKIHAPTVSRAHPATLASPSSE
                     PGNVAPTASVATASAPGLSRSSSISSFTSEKSTLNPHAKEFRLNPNAKSFVPSPTQLK
                     AASPVSDGSFYYPANVAPVQHMQGMPVGVGMGPSYPPHQPVIFGPQGTPLQTPQTYFH
                     PNGPQYGQQMLLGQPRQVYYMPNFPPEMPYKGREY"
     misc_feature    548..793
                     /gene="LOC139903924"
                     /note="Ataxin 2 SM domain; Region: SM-ATX; pfam14438"
                     /db_xref="CDD:464173"
     misc_feature    1019..1213
                     /gene="LOC139903924"
                     /note="LsmAD domain; Region: LsmAD; pfam06741"
                     /db_xref="CDD:461998"
     polyA_site      2549
                     /gene="LOC139903924"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgatagaaaa tactcggtat tgaggtaaat gaaaactaaa cctaagcctt tttggtgggt
       61 aaatacaaat ttttggggaa aatttgtcga tcgcacgcta ctaagactac ttactcctcc
      121 tattcgctga ttttaggatc taaatcatca tcatcattgt ttcaattcaa ttcaatttca
      181 aatctttacc gacaaatcag tcgctgaatt cgttcatcga tccacaatca ccaccaccac
      241 caccaccacc tattcaacgc actttctttt tctgaccagc ttccattatt tatctgctat
      301 cagatcatcc cgcatcttat atttggctga ttagaggttc caggcaagaa tgaacccaca
      361 ccaagttgcg cagcccagat cttcctctaa tgggtttaac cgtggaagag gtgaaaaaga
      421 aacgggtact agacttggaa gtaagtcgca gcctggaaaa gtaaattata ataaaagttc
      481 tacttcagct tattcaggtg tacaagctgg taacaaaggg ggagttgaaa gcccatcacg
      541 tgagcggcta gtttacgtaa caacatgtct cattgggcat caggtggaag tacaggttat
      601 tgatggatct gtgtactctg gaatatttca tgcgactgat gttcggaaag attttggaat
      661 aatcttgaaa atggctcgtg taacaaaggc tggttcatct cgaggacaga aaaacatttc
      721 agattctgtt cagaaacccc cttctaaaat tttgataata cccgcaaaag acctcgtgca
      781 gattgtagct aagagtgtat caataactag agatggattg gtgaatgagc ttcagcatga
      841 tcaactgcat gacattatga tagactcatc tatttctcaa tcccggcatg ttgacttgga
      901 acgagagttg gaaccttggg tccccgatga tgataatcca gtatgtcctg agttagacaa
      961 tacttttgat cgtcattgga ataggggctg gaatcaattt gaagcaaatg ccgcattatt
     1021 tggagtaaca agtacttttg atgaggagct ctacacaaca aaactggtta gaggtcctca
     1081 aatgatagaa agagaaaggg aggccttgag aatagctagg gagattgaag gtgaggacac
     1141 tcaagatctt catttagcag aggaaagagg catccacttc catgaaaagt tcgatctcga
     1201 tgaggaaact aaatactcat ctgtttttcg tggggttgat gatagtggct atgatgaaga
     1261 tgaggacgtt ttggattctc aaaataacga aacctttgga gatgtttctg attctatcat
     1321 gaacaagtca ttcagtgagg ctttgcaggt cgaggctcaa cgttctcttt tgagtactag
     1381 cagcgacatc catccatctg gttctatgga tggtcagagc agaattcagg actatcagac
     1441 taatcaacat gcaggaagta attactccaa agaggataaa gagaacaaaa cggtgtgtga
     1501 tcaaagccag gcttcaaaac ttaaggagtt accaaataat gtaagtggca ataatgaacc
     1561 tcctgcttct gctactgcca aagctcaaga aaagacgagt tctagtgata aagcggaggt
     1621 tgcatcagcc accttcaaga ttcatgcacc tacagtctct cgtgcacatc ctgctacgct
     1681 tgcatcacct tcttcagaac ctggaaatgt tgcccctact gcttctgttg ccactgcaag
     1741 tgcccctgga ttatcacgta gttcgtcaat cagctctttc acctcagaaa agtcaacctt
     1801 gaatcctcat gccaaggaat ttagactgaa cccaaatgct aagagttttg ttccatcacc
     1861 aacacaattg aaggctgctt ctccagtatc cgatggctct ttttactacc cagctaatgt
     1921 agctccagtg caacatatgc aagggatgcc tgttggtgtt ggaatgggac cttcatatcc
     1981 tccccaccaa cctgttattt ttggtccaca aggaacgcca ttgcaaaccc ctcagactta
     2041 ttttcaccca aatggtccac aatatggaca gcagatgctt cttggtcaac ctcgacaagt
     2101 gtactacatg ccaaactttc ctccggaaat gccatataaa ggaagagaat attaggttaa
     2161 cagtggattt gagtcatcag attacaaatt ttgacatgct cttgaagcat gatttgcaca
     2221 aaagggaaaa gcagatccgt aaccttcgct acatggtgtt gtaccatgac taactggcat
     2281 ttgttaaaag ctcttcaatg atatcttttt tcgtgtgttt tttttccggg ttatgttttt
     2341 tatttattta ggttgtgtta tttgacccac acaagttttt ctaagaaggt actttttgca
     2401 tcctttgatt acacatctaa tgttggcatg ttgccttttt attatttttt tttattatgg
     2461 aatttgggtg aagtttaggg gtacgctgtg tgttagtata tcgtgttttg ttggtggtaa
     2521 gatgctctta aagtaaaacc agttctttg
//
LOCUS       XM_071885848            2539 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein-interacting protein 3-like (LOC139903924), transcript
            variant X2, mRNA.
ACCESSION   XM_071885848
VERSION     XM_071885848.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2539
                     /gene="LOC139903924"
                     /note="polyadenylate-binding protein-interacting protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139903924"
     CDS             349..2145
                     /gene="LOC139903924"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 3-like isoform X2"
                     /protein_id="XP_071741949.1"
                     /db_xref="GeneID:139903924"
                     /translation="MNPHQVAQPRSSSNGFNRGRGEKETGTRLGSKSQPGKVNYNKSS
                     TSGVQAGNKGGVESPSRERLVYVTTCLIGHQVEVQVIDGSVYSGIFHATDVRKDFGII
                     LKMARVTKAGSSRGQKNISDSVQKPPSKILIIPAKDLVQIVAKSVSITRDGLVNELQH
                     DQLHDIMIDSSISQSRHVDLERELEPWVPDDDNPVCPELDNTFDRHWNRGWNQFEANA
                     ALFGVTSTFDEELYTTKLVRGPQMIEREREALRIAREIEGEDTQDLHLAEERGIHFHE
                     KFDLDEETKYSSVFRGVDDSGYDEDEDVLDSQNNETFGDVSDSIMNKSFSEALQVEAQ
                     RSLLSTSSDIHPSGSMDGQSRIQDYQTNQHAGSNYSKEDKENKTVCDQSQASKLKELP
                     NNVSGNNEPPASATAKAQEKTSSSDKAEVASATFKIHAPTVSRAHPATLASPSSEPGN
                     VAPTASVATASAPGLSRSSSISSFTSEKSTLNPHAKEFRLNPNAKSFVPSPTQLKAAS
                     PVSDGSFYYPANVAPVQHMQGMPVGVGMGPSYPPHQPVIFGPQGTPLQTPQTYFHPNG
                     PQYGQQMLLGQPRQVYYMPNFPPEMPYKGREY"
     misc_feature    538..783
                     /gene="LOC139903924"
                     /note="Ataxin 2 SM domain; Region: SM-ATX; pfam14438"
                     /db_xref="CDD:464173"
     misc_feature    1009..1203
                     /gene="LOC139903924"
                     /note="LsmAD domain; Region: LsmAD; pfam06741"
                     /db_xref="CDD:461998"
     polyA_site      2539
                     /gene="LOC139903924"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatagaaaat actcggtatt gaggtaaatg aaaactaaac ctaagccttt ttggtgggta
       61 aatacaaatt tttggggaaa atttgtcgat cgcacgctac taagactact tactcctcct
      121 attcgctgat tttaggatct aaatcatcat catcattgtt tcaattcaat tcaatttcaa
      181 atctttaccg acaaatcagt cgctgaattc gttcatcgat ccacaatcac caccaccacc
      241 accaccacct attcaacgca ctttcttttt ctgaccagct tccattattt atctgctatc
      301 agatcatccc gcatcttata tttggctgat tagaggttcc aggcaagaat gaacccacac
      361 caagttgcgc agcccagatc ttcctctaat gggtttaacc gtggaagagg tgaaaaagaa
      421 acgggtacta gacttggaag taagtcgcag cctggaaaag taaattataa taaaagttct
      481 acttcaggtg tacaagctgg taacaaaggg ggagttgaaa gcccatcacg tgagcggcta
      541 gtttacgtaa caacatgtct cattgggcat caggtggaag tacaggttat tgatggatct
      601 gtgtactctg gaatatttca tgcgactgat gttcggaaag attttggaat aatcttgaaa
      661 atggctcgtg taacaaaggc tggttcatct cgaggacaga aaaacatttc agattctgtt
      721 cagaaacccc cttctaaaat tttgataata cccgcaaaag acctcgtgca gattgtagct
      781 aagagtgtat caataactag agatggattg gtgaatgagc ttcagcatga tcaactgcat
      841 gacattatga tagactcatc tatttctcaa tcccggcatg ttgacttgga acgagagttg
      901 gaaccttggg tccccgatga tgataatcca gtatgtcctg agttagacaa tacttttgat
      961 cgtcattgga ataggggctg gaatcaattt gaagcaaatg ccgcattatt tggagtaaca
     1021 agtacttttg atgaggagct ctacacaaca aaactggtta gaggtcctca aatgatagaa
     1081 agagaaaggg aggccttgag aatagctagg gagattgaag gtgaggacac tcaagatctt
     1141 catttagcag aggaaagagg catccacttc catgaaaagt tcgatctcga tgaggaaact
     1201 aaatactcat ctgtttttcg tggggttgat gatagtggct atgatgaaga tgaggacgtt
     1261 ttggattctc aaaataacga aacctttgga gatgtttctg attctatcat gaacaagtca
     1321 ttcagtgagg ctttgcaggt cgaggctcaa cgttctcttt tgagtactag cagcgacatc
     1381 catccatctg gttctatgga tggtcagagc agaattcagg actatcagac taatcaacat
     1441 gcaggaagta attactccaa agaggataaa gagaacaaaa cggtgtgtga tcaaagccag
     1501 gcttcaaaac ttaaggagtt accaaataat gtaagtggca ataatgaacc tcctgcttct
     1561 gctactgcca aagctcaaga aaagacgagt tctagtgata aagcggaggt tgcatcagcc
     1621 accttcaaga ttcatgcacc tacagtctct cgtgcacatc ctgctacgct tgcatcacct
     1681 tcttcagaac ctggaaatgt tgcccctact gcttctgttg ccactgcaag tgcccctgga
     1741 ttatcacgta gttcgtcaat cagctctttc acctcagaaa agtcaacctt gaatcctcat
     1801 gccaaggaat ttagactgaa cccaaatgct aagagttttg ttccatcacc aacacaattg
     1861 aaggctgctt ctccagtatc cgatggctct ttttactacc cagctaatgt agctccagtg
     1921 caacatatgc aagggatgcc tgttggtgtt ggaatgggac cttcatatcc tccccaccaa
     1981 cctgttattt ttggtccaca aggaacgcca ttgcaaaccc ctcagactta ttttcaccca
     2041 aatggtccac aatatggaca gcagatgctt cttggtcaac ctcgacaagt gtactacatg
     2101 ccaaactttc ctccggaaat gccatataaa ggaagagaat attaggttaa cagtggattt
     2161 gagtcatcag attacaaatt ttgacatgct cttgaagcat gatttgcaca aaagggaaaa
     2221 gcagatccgt aaccttcgct acatggtgtt gtaccatgac taactggcat ttgttaaaag
     2281 ctcttcaatg atatcttttt tcgtgtgttt tttttccggg ttatgttttt tatttattta
     2341 ggttgtgtta tttgacccac acaagttttt ctaagaaggt actttttgca tcctttgatt
     2401 acacatctaa tgttggcatg ttgccttttt attatttttt tttattatgg aatttgggtg
     2461 aagtttaggg gtacgctgtg tgttagtata tcgtgttttg ttggtggtaa gatgctctta
     2521 aagtaaaacc agttctttg
//
LOCUS       XM_071885849            2542 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein-interacting protein 3-like (LOC139903924), transcript
            variant X3, mRNA.
ACCESSION   XM_071885849
VERSION     XM_071885849.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2542
                     /gene="LOC139903924"
                     /note="polyadenylate-binding protein-interacting protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139903924"
     CDS             352..2148
                     /gene="LOC139903924"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 3-like isoform X3"
                     /protein_id="XP_071741950.1"
                     /db_xref="GeneID:139903924"
                     /translation="MNPHQVAQPRSSSNGFNRGRGEKETGTRLGSKSQPGKVNYNKSS
                     TSAYSGVQAGNKGGVESPSRERLVYVTTCLIGHQVEVQVIDGSVYSGIFHATDVRKDF
                     GIILKMARVTKAGSSRGQKNISDSVQKPPSKILIIPAKDLVQIVAKSVSITRDGLVNE
                     LQHDQLHDIMIDSSISQSRHVDLERELEPWVPDDDNPVCPELDNTFDRHWNRGWNQFE
                     ANAALFGVTSTFDEELYTTKLVRGPQMIEREREALRIAREIEGEDTQDLHLAEERGIH
                     FHEKFDLDEETKYSSVFRGVDDSGYDEDEDVLDSQNNETFGDVSDSIMNKSFSEVEAQ
                     RSLLSTSSDIHPSGSMDGQSRIQDYQTNQHAGSNYSKEDKENKTVCDQSQASKLKELP
                     NNVSGNNEPPASATAKAQEKTSSSDKAEVASATFKIHAPTVSRAHPATLASPSSEPGN
                     VAPTASVATASAPGLSRSSSISSFTSEKSTLNPHAKEFRLNPNAKSFVPSPTQLKAAS
                     PVSDGSFYYPANVAPVQHMQGMPVGVGMGPSYPPHQPVIFGPQGTPLQTPQTYFHPNG
                     PQYGQQMLLGQPRQVYYMPNFPPEMPYKGREY"
     misc_feature    550..795
                     /gene="LOC139903924"
                     /note="Ataxin 2 SM domain; Region: SM-ATX; pfam14438"
                     /db_xref="CDD:464173"
     misc_feature    <832..1404
                     /gene="LOC139903924"
                     /note="US22 family homolog; Provisional; Region: PHA03346;
                     cl42846"
                     /db_xref="CDD:456191"
     misc_feature    1021..1215
                     /gene="LOC139903924"
                     /note="LsmAD domain; Region: LsmAD; pfam06741"
                     /db_xref="CDD:461998"
     polyA_site      2542
                     /gene="LOC139903924"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcgatagaa aatactcggt attgaggtaa atgaaaacta aacctaagcc tttttggtgg
       61 gtaaatacaa atttttgggg aaaatttgtc gatcgcacgc tactaagact acttactcct
      121 cctattcgct gattttagga tctaaatcat catcatcatt gtttcaattc aattcaattt
      181 caaatcttta ccgacaaatc agtcgctgaa ttcgttcatc gatccacaat caccaccacc
      241 accaccacca cctattcaac gcactttctt tttctgacca gcttccatta tttatctgct
      301 atcagatcat cccgcatctt atatttggct gattagaggt tccaggcaag aatgaaccca
      361 caccaagttg cgcagcccag atcttcctct aatgggttta accgtggaag aggtgaaaaa
      421 gaaacgggta ctagacttgg aagtaagtcg cagcctggaa aagtaaatta taataaaagt
      481 tctacttcag cttattcagg tgtacaagct ggtaacaaag ggggagttga aagcccatca
      541 cgtgagcggc tagtttacgt aacaacatgt ctcattgggc atcaggtgga agtacaggtt
      601 attgatggat ctgtgtactc tggaatattt catgcgactg atgttcggaa agattttgga
      661 ataatcttga aaatggctcg tgtaacaaag gctggttcat ctcgaggaca gaaaaacatt
      721 tcagattctg ttcagaaacc cccttctaaa attttgataa tacccgcaaa agacctcgtg
      781 cagattgtag ctaagagtgt atcaataact agagatggat tggtgaatga gcttcagcat
      841 gatcaactgc atgacattat gatagactca tctatttctc aatcccggca tgttgacttg
      901 gaacgagagt tggaaccttg ggtccccgat gatgataatc cagtatgtcc tgagttagac
      961 aatacttttg atcgtcattg gaataggggc tggaatcaat ttgaagcaaa tgccgcatta
     1021 tttggagtaa caagtacttt tgatgaggag ctctacacaa caaaactggt tagaggtcct
     1081 caaatgatag aaagagaaag ggaggccttg agaatagcta gggagattga aggtgaggac
     1141 actcaagatc ttcatttagc agaggaaaga ggcatccact tccatgaaaa gttcgatctc
     1201 gatgaggaaa ctaaatactc atctgttttt cgtggggttg atgatagtgg ctatgatgaa
     1261 gatgaggacg ttttggattc tcaaaataac gaaacctttg gagatgtttc tgattctatc
     1321 atgaacaagt cattcagtga ggtcgaggct caacgttctc ttttgagtac tagcagcgac
     1381 atccatccat ctggttctat ggatggtcag agcagaattc aggactatca gactaatcaa
     1441 catgcaggaa gtaattactc caaagaggat aaagagaaca aaacggtgtg tgatcaaagc
     1501 caggcttcaa aacttaagga gttaccaaat aatgtaagtg gcaataatga acctcctgct
     1561 tctgctactg ccaaagctca agaaaagacg agttctagtg ataaagcgga ggttgcatca
     1621 gccaccttca agattcatgc acctacagtc tctcgtgcac atcctgctac gcttgcatca
     1681 ccttcttcag aacctggaaa tgttgcccct actgcttctg ttgccactgc aagtgcccct
     1741 ggattatcac gtagttcgtc aatcagctct ttcacctcag aaaagtcaac cttgaatcct
     1801 catgccaagg aatttagact gaacccaaat gctaagagtt ttgttccatc accaacacaa
     1861 ttgaaggctg cttctccagt atccgatggc tctttttact acccagctaa tgtagctcca
     1921 gtgcaacata tgcaagggat gcctgttggt gttggaatgg gaccttcata tcctccccac
     1981 caacctgtta tttttggtcc acaaggaacg ccattgcaaa cccctcagac ttattttcac
     2041 ccaaatggtc cacaatatgg acagcagatg cttcttggtc aacctcgaca agtgtactac
     2101 atgccaaact ttcctccgga aatgccatat aaaggaagag aatattaggt taacagtgga
     2161 tttgagtcat cagattacaa attttgacat gctcttgaag catgatttgc acaaaaggga
     2221 aaagcagatc cgtaaccttc gctacatggt gttgtaccat gactaactgg catttgttaa
     2281 aagctcttca atgatatctt ttttcgtgtg ttttttttcc gggttatgtt ttttatttat
     2341 ttaggttgtg ttatttgacc cacacaagtt tttctaagaa ggtacttttt gcatcctttg
     2401 attacacatc taatgttggc atgttgcctt tttattattt ttttttatta tggaatttgg
     2461 gtgaagttta ggggtacgct gtgtgttagt atatcgtgtt ttgttggtgg taagatgctc
     2521 ttaaagtaaa accagttctt tg
//
LOCUS       XM_071885850            2310 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipid:diacylglycerol
            acyltransferase 1-like (LOC139903925), mRNA.
ACCESSION   XM_071885850
VERSION     XM_071885850.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2310
                     /gene="LOC139903925"
                     /note="phospholipid:diacylglycerol acyltransferase 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 30 Proteins"
                     /db_xref="GeneID:139903925"
     CDS             50..2080
                     /gene="LOC139903925"
                     /codon_start=1
                     /product="phospholipid:diacylglycerol acyltransferase
                     1-like"
                     /protein_id="XP_071741951.1"
                     /db_xref="GeneID:139903925"
                     /translation="MATIARRRKQPEAELQLDPKLDESEDEDDKNKKAAKNSSANNNK
                     YKNKNKSKNYSCIDNCCWFIGCVCSVWWFLLFLYNAMPASFPQFVTEAISGPLPDPPG
                     VKCLKQGLKVNHPVVFVPGIVTGGLELWEGHQCMDGLFRKRLWGGTFGEVYKRPSCWV
                     QHMSLDNKTGMDPPGIRVRPVSGLVAADYFAPGYFVWAVLIANLARVGYEEKNMYMAA
                     YDWRLAFQNTEVRDQTLSRIKSNIELMVATNGGKKAVIIPHSMGVIYFLHFMKWVEAP
                     APMGGGGGSDWCAKHIKAVMNIGGPFLGVPKAVAGLFSAEAKDIASARALAPGVLDSD
                     LFQIQTLQHLMRMSRTWDSTMSMIPKGGDTIWGGFDWSPEEGYSPSKRKQEKNDTQQE
                     SKGEVCESTQAHYGRLVSFGRDVAEAPSSEIERIEFRGAVKGNNVANNTCRDVWTEYH
                     DMGFGGIKAVAEYKVYTAGEIVDLLEFVAPKMMERGSAHFSFGIADNLDDPKYSHYKY
                     WSNPLETKLPDAPDMEIYTMYGVGIPTERAYIYKLTPAAECYIPFRIDTSAKDKNEDG
                     CLKDGVYTVDGDETVPALSAGFMCAKGWRGKTRFNPSGIKTYVREYDHNPPANFLEGR
                     GTQSGAHVDIMGNFQLIEDVIRVAAGATGEELGGDQVYTGIFEWAKKINLKL"
     misc_feature    215..2077
                     /gene="LOC139903925"
                     /note="phosphatidylcholine-sterol O-acyltransferase;
                     Region: PLN02517"
                     /db_xref="CDD:178132"
ORIGIN      
        1 ccggccgtcg cactttgact tttcatttca tagtttttcg taactactaa tggctacaat
       61 agctcgcaga agaaaacaac cagaagcgga actacaacta gatccaaaac tcgacgaatc
      121 ggaagacgaa gatgataaaa ataaaaaagc agcaaaaaat tcatcagcta ataataataa
      181 atataaaaat aaaaataaaa gtaaaaacta ttcgtgtatt gataactgct gttggtttat
      241 aggatgtgta tgttcagtat ggtggttttt attattttta tacaatgcga tgcctgcttc
      301 atttccgcag tttgttacgg aagcaatatc cggaccctta cccgacccgc caggtgtcaa
      361 gtgtttaaaa caaggactga aagtgaatca tccagttgta tttgtacctg gaattgtgac
      421 aggtggacta gagctatggg aaggtcatca atgtatggat ggtttgtttc gtaaacgtct
      481 ttggggcgga acctttggtg aagtttacaa aaggccttca tgttgggtac aacatatgtc
      541 actagacaac aaaactggga tggatcctcc tggtattcgg gtcagacccg ttagtggact
      601 tgtagctgct gactactttg ctccaggata ttttgtatgg gctgttttga ttgctaactt
      661 ggctcgtgtt ggatatgaag agaaaaatat gtatatggct gcatatgact ggagacttgc
      721 atttcaaaac accgaggtaa gagatcaaac attgagccgg ataaagagca atatagaact
      781 gatggttgct acaaatggtg gtaaaaaggc ggttatcatt ccacattcaa tgggtgttat
      841 ctactttttg catttcatga aatgggtaga agcaccagct ccaatgggtg gtggaggcgg
      901 gtcagattgg tgtgctaagc acataaaggc tgtgatgaat attggtgggc cctttttagg
      961 tgtcccaaaa gctgtagctg gacttttttc tgctgaagcc aaggatattg catcagccag
     1021 agcccttgca ccaggtgtgt tggactcgga tttatttcag attcaaacat tgcaacatct
     1081 aatgagaatg agccgaacct gggattcaac catgtcgatg ataccaaaag gcggggacac
     1141 catttggggt ggttttgact ggtcacccga agaaggatat tctcctagta agagaaaaca
     1201 agaaaaaaac gatacccaac aagagtcaaa aggtgaagta tgtgagtcaa cacaagcaca
     1261 ttatggaagg ttagtatcat ttggacgtga tgtagcagaa gcaccatctt cagagatcga
     1321 aaggatagaa tttaggggtg ctgtaaaggg taataatgtt gcgaataata cgtgtcgcga
     1381 tgtgtggact gaataccatg acatgggatt tggtggtata aaagctgttg ctgaatacaa
     1441 ggtgtataca gctggagaga ttgtggattt gctcgagttt gttgcaccga aaatgatgga
     1501 acgtggcagt gctcattttt catttggcat tgcagataat ttggatgacc caaagtactc
     1561 gcattataaa tactggtcca acccattgga gacaaagtta ccagatgctc ctgacatgga
     1621 aatctataca atgtatgggg ttggcatccc aaccgaacga gcatacattt ataagctcac
     1681 acctgcagca gaatgctaca taccctttcg aattgacacc tcagcaaaag ataaaaacga
     1741 ggatggctgt ttaaaagatg gagtttatac tgttgatgga gatgaaactg ttccagcatt
     1801 aagcgcagga ttcatgtgtg caaaaggatg gcgtggtaaa acacgattca atccttcagg
     1861 aattaaaaca tacgtccggg agtatgatca taacccgcca gctaactttc ttgaaggccg
     1921 tggcacacaa agtggggccc atgtggatat aatgggtaat tttcaattga ttgaagatgt
     1981 tataagagtt gcagccggag ccacaggtga agaactggga ggtgaccagg tttatacagg
     2041 tatatttgag tgggccaaaa aaatcaactt aaagttatga aatgttgaag tggattaaga
     2101 tacaagtatt taaagctaaa ttgtaaggga ttacgttatc cctatgtaca ttagcaattt
     2161 agataccctt aatattgggt gacttattat gtagcatgtt gcattcttat aagcgttata
     2221 gaactcattt gttgttaatt aatattctaa attgttgaac agtttcatgt aagaaagatt
     2281 aagatgtgga catattcatt atatcttctg
//
LOCUS       XM_071885851            1712 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein Brevis radix-like 2
            (LOC139903926), mRNA.
ACCESSION   XM_071885851
VERSION     XM_071885851.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1712
                     /gene="LOC139903926"
                     /note="protein Brevis radix-like 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139903926"
     CDS             222..1265
                     /gene="LOC139903926"
                     /codon_start=1
                     /product="protein Brevis radix-like 2"
                     /protein_id="XP_071741952.1"
                     /db_xref="GeneID:139903926"
                     /translation="MLTCIPCSKELNAGSLHEQEQNDTVASPRNKPAIKALTSQIKDM
                     AVKASGAYKNCKPCSGSNHNHKDGEFLDSEVGSVSEGFHCGYKRTCKSTPRVWGKEME
                     ARLKGLSSGGSTPASYSDRIESVKFMEDDVLKEWVAQVEPGVLITFHSLPQGGNDLKR
                     IRFSREMFNKRQAQRWWAENCDKVMELYNVQRFNHRGVPPPAPPKSQDESSKIESFEN
                     SPVTPPLSKERLPRNFYPKEPHHDSSGLSSTPALLSISGAKTETSSLASARSSSSREG
                     DHSGELSMSNASDVGTEWVEQDEPGVYITIRALPGGNRELRRVRFSREKFGEMNARMW
                     WEQNRGRIQEQYL"
     misc_feature    288..395
                     /gene="LOC139903926"
                     /note="Transcription factor BRX N-terminal domain; Region:
                     BRX_N; pfam13713"
                     /db_xref="CDD:404581"
     misc_feature    621..785
                     /gene="LOC139903926"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; Region: BRX; pfam08381"
                     /db_xref="CDD:429960"
     misc_feature    1095..1259
                     /gene="LOC139903926"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; Region: BRX; pfam08381"
                     /db_xref="CDD:429960"
ORIGIN      
        1 ttgtgcattc gactgaacca aatgtgggtt tcataatcat aacaactttt ttacataaac
       61 gttcatgtaa cggctttttc attttatttg atttaattac aaccgcgtca attcaaatct
      121 atgtttgttt acttcatttt tacttcgatg cataccggtt acgagtttga tttgaatcaa
      181 atctgaaatc gaagagtgtg tgagatcgga gaaacggaaa tatgttgact tgtatccctt
      241 gttcaaagga gttaaacgct ggatctcttc atgaacaaga gcaaaacgac accgttgcat
      301 cacctcgcaa taaaccagct attaaagctc tcacatctca gattaaggat atggcggtga
      361 aggcatcagg agcatataag aactgcaagc cgtgttcggg atcgaatcat aatcataagg
      421 atggtgaatt tttggattct gaagttggat cagtttctga agggtttcat tgtggatata
      481 aaaggacttg taagtctaca cctagggttt gggggaagga aatggaagct agattgaaag
      541 ggctttcaag tggtggaagt actcctgctt cgtatagtga tcgaattgaa tcggttaagt
      601 ttatggaaga tgatgtactt aaagaatggg ttgctcaagt tgaacccggg gttctgatca
      661 cgtttcattc tttaccgcaa ggaggaaatg atttaaaacg tattcgattc agccgtgaaa
      721 tgttcaacaa aaggcaagct cagaggtggt gggccgagaa ctgtgacaag gtcatggaat
      781 tgtataatgt tcagcgtttc aatcatcgag gagtaccacc acccgctcca ccaaaatctc
      841 aagacgagag ttcaaaaatc gagtcttttg agaatagccc agtcacgcca ccacttagca
      901 aggagcggct gcctcgaaat ttctacccaa aggaacccca tcacgattct agtgggctct
      961 catcgacgcc tgcactattg agcataagtg gggccaaaac tgaaacatca tcattggctt
     1021 ctgcaaggag cagttcgtct agagagggtg atcactcagg agagctttca atgagtaatg
     1081 caagtgatgt gggaactgaa tgggttgagc aggatgagcc aggcgtgtac attacaatca
     1141 gagcactgcc aggtggcaat cgtgagctga ggcgtgttcg tttcagtcga gaaaaatttg
     1201 gagaaatgaa tgcaaggatg tggtgggaac aaaaccgagg tagaattcaa gaacagtact
     1261 tgtgatacaa agcctttgga gacgatactt gttttttagg tgcttacgtt gaacacaacg
     1321 gttcaatttt tgtggtgaca ttgtttaact tcttcgaaga tgtgacatct tgggtgaata
     1381 taatgtctca ccattcacta gaaaccatag cgaatcatgt gttggaatcc aagcttcagc
     1441 tattttatta ttttaacgct tacttggtat gaatatttgt aagagttctt atctatagtg
     1501 aaaagtgagc gttaatccac gccaagtttt cactaagata ggtagtgtat gcgtcaaaca
     1561 aacgtcagcc aaaggtgtgg cggaagcttg acgtttaaat tgtgggacca aatggctttt
     1621 agttgtactt tgtgtttaat atattgtaca tgttttattt tagggatata atcccgggta
     1681 atatttagtg aacgatagag aaaatttagt ta
//
LOCUS       XM_071885852            1477 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein BIG GRAIN 1-like A
            (LOC139903927), mRNA.
ACCESSION   XM_071885852
VERSION     XM_071885852.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1477
                     /gene="LOC139903927"
                     /note="protein BIG GRAIN 1-like A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139903927"
     CDS             201..1292
                     /gene="LOC139903927"
                     /codon_start=1
                     /product="protein BIG GRAIN 1-like A"
                     /protein_id="XP_071741953.1"
                     /db_xref="GeneID:139903927"
                     /translation="MYKPARHNPSFSSSLLDEIYRSIDQRNDQEVPKYRNTSFNTNSQ
                     IRHEIQDKVTKRSSQRDLRCFNSSSSSSGSSCTGFSSSEADSVYCVSIKPNSIRTSTH
                     QHDDYNKRESHDNMYGQRYQHDDIQSKQKHEGIVKTKSRAMKIYGDLKKVKQPISPGG
                     RLATFLNSIFTTKNMKSSSDEASVSKSTNASTCSSASAYSRSCLSKTPSSRGKLSSNK
                     KRSVRFYPVSVIVDEDCQPCGHKSLYGEQSDPKTIKFVQNRDIEEYDVRSSEKTRRIE
                     EAARNLLRNYQKKVDLITSKTKSENEIEMNYEDDENDDDDASSSTSSDLFELENLSAI
                     GMGKYGDELPVYETTHLDTNLAIGNGFLI"
ORIGIN      
        1 ttctcattat caacaaaccc ctgttttcca cttcactctc taaaccccaa atcattctta
       61 cctcactctt ctccagcaca cattccacct cttaattact actgtatttt tgactttttt
      121 tttttcctta cttttattca aaatgtgttc tgatttcatt tcctcttaaa atcatctcta
      181 aatctacatt cacatccatc atgtacaaac cagctagaca caatccttct ttctcttcat
      241 cgttgctcga cgagatctac cgatctatcg atcaacgaaa cgatcaagaa gtacctaaat
      301 atcgaaacac aagttttaat actaattctc aaattcgcca tgaaatacaa gataaagtta
      361 caaaaagaag ttcacaacgt gacttacgtt gctttaattc gagctccagc tcatccggtt
      421 ccagctgtac cggtttttca tcatctgaag ctgattcggt ttactgcgtc tcaataaaac
      481 ctaactctat tcgaacaagc acgcatcaac acgatgatta caataaaaga gaatcacacg
      541 ataacatgta cggacaaagg tatcagcatg acgatattca atcaaaacag aaacacgaag
      601 gtatcgtgaa gacgaaatca cgagcaatga agatctatgg cgatttgaaa aaggtgaagc
      661 aacctatatc gccaggaggt agattagcga cttttttgaa ctcgattttc acaacgaaga
      721 acatgaaatc atcatcagac gaagcgagtg tatcaaaatc gactaatgcg tcaacatgtt
      781 catcagcgtc tgcatattcg cgatcgtgtt taagtaaaac gccgtcgtct agaggtaaat
      841 tgagcagtaa taaaaagaga tcggttaggt tttatccggt gagtgtgatt gtagatgaag
      901 actgtcaacc gtgcggacat aaatcgttgt acggagaaca atcggatcca aaaacaatca
      961 aattcgttca aaatcgtgac attgaagagt acgacgttcg ttcgagtgag aaaactcgaa
     1021 gaattgaaga agctgcgagg aatttgttga gaaattacca gaaaaaagtc gatctgatta
     1081 cgagtaaaac gaaaagcgaa aatgaaatcg agatgaatta tgaagacgat gaaaatgatg
     1141 acgatgatgc ttctagtagc acgagttctg atttgtttga attggagaat ttatctgcaa
     1201 ttggaatggg gaagtatgga gatgaattac cggtgtatga aacaactcat ttggatacga
     1261 atttagcaat tggaaatggt tttctaattt aataaaaaat aaaaaatatt attttgttaa
     1321 ttttagttaa tattatacta ctacgtatat gtaatttgta attggtgtca tggtgtgggg
     1381 gcattaatat attagaaagt taaactattt ttcttgtttg gtgtttcttg ttgtattttt
     1441 ctaacttctt aaaattaaaa acatctatat acaaagg
//
LOCUS       XM_071885853            1792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides trimethyltridecatetraene
            synthase-like (LOC139903928), mRNA.
ACCESSION   XM_071885853
VERSION     XM_071885853.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1792
                     /gene="LOC139903928"
                     /note="trimethyltridecatetraene synthase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139903928"
     CDS             19..1560
                     /gene="LOC139903928"
                     /codon_start=1
                     /product="trimethyltridecatetraene synthase-like"
                     /protein_id="XP_071741954.1"
                     /db_xref="GeneID:139903928"
                     /translation="MDSLISSSPYYAIAWLATVALLLLARHLCRPNTLNPPPGPKPWP
                     IIGNLNLMGTLPHHSIHELSKKYGQVMQLKFGSKNVLVASSVEAAKIILKTQDVTFAC
                     RPKTAAGKYTTYNYSDITWSPYGAYWRQARKMCLMVLFSAKRLESYEYIRVEETNSLL
                     KTIFKSKGTGILLKDLLSTVSLNVISRMVLGKRYLDESEDSIVSPDDFKKMLDELFLL
                     NGVFNIGDSIPWLDFMDLQGYIKRMKTVGKKFDRFLEHVLDEHNARRKAEGEKFVATD
                     MVDLLLELADDPDLDVKLERHGVKAFTQDLLAGGTESSAVTVEWAISEILKRPEIFEK
                     ATEELDRVIGKNKWVREKDMPNLPYIESIAKETMRLHPVAPMLVPRKARENCKVLGYD
                     VTEGTQVFVNVWTIGRDPTLWDNPDEFYPDRFIGKNIDVKGHDFSLLPFGSGRRMCPG
                     YSLGLKVIELTLANLLHGFNWKLPGTMNKDDLDMNEIFGLSTPKKFPLVTVAEPRLPV
                     EMYRF"
     misc_feature    220..1512
                     /gene="LOC139903928"
                     /note="Plant cytochrome P450s, clan CYP71; Region:
                     CYP71_clan; cd20618"
                     /db_xref="CDD:410711"
     misc_feature    order(325..327,400..402,412..414,436..438,571..573,
                     934..936,943..948,955..960,1135..1137,1147..1152,
                     1156..1158,1336..1347,1354..1368,1375..1380)
                     /gene="LOC139903928"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410711"
     misc_feature    order(661..663,673..675,745..747,931..933,940..945,
                     1150..1152)
                     /gene="LOC139903928"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:410711"
ORIGIN      
        1 cattccccca aacccaaaat ggactcacta atatcctcat caccttacta cgccatagca
       61 tggctagcca cggtggcact cctcctttta gcccgccatc tctgccgtcc caacaccctt
      121 aacccaccac ccggcccaaa accttggccc ataatcggca acctcaacct tatgggcacc
      181 ctccctcacc attcaatcca tgaactctca aaaaaatacg gtcaagtcat gcaactaaaa
      241 ttcgggtcca aaaacgtttt agtcgcgtcg tctgttgaag ccgccaaaat aatacttaaa
      301 acacaagatg tcacgtttgc ttgtaggcca aaaactgcgg caggaaaata cacaacatat
      361 aattattcag acatcacgtg gtccccatat ggcgcttatt ggcgccaagc acgtaaaatg
      421 tgcttaatgg tattgttcag tgctaaacgt ttagaatcgt acgagtatat tagagtagaa
      481 gaaacaaact ctttgttgaa aacgatattt aagtcaaaag gaacaggaat tttactaaaa
      541 gatttgttat caaccgttag tttaaatgtg attagtagaa tggtattggg aaaaaggtat
      601 ttagatgaat cggaagactc gattgtgagt ccggatgatt ttaagaaaat gttggatgaa
      661 ttgtttttac taaatggtgt gtttaatatc ggtgattcga taccttggtt agattttatg
      721 gatttacaag ggtacataaa gaggatgaaa accgttggta agaaatttga tcggtttttg
      781 gagcatgttt tggatgaaca taacgcgaga agaaaggcgg aaggggagaa gtttgtagca
      841 actgatatgg ttgatttgtt gttagaactt gctgatgatc ctgatcttga tgttaagctt
      901 gaacgacatg gtgttaaagc ttttactcag gatttacttg ctggtggaac cgagagttca
      961 gcggttacag tcgaatgggc gatttccgaa atactaaaaa gacccgagat cttcgaaaag
     1021 gcgaccgaag agcttgatcg ggtcattggc aaaaacaaat gggttcgaga aaaggacatg
     1081 cccaatttac catatatcga gtctattgct aaagagacaa tgcggttgca tcccgtggca
     1141 ccaatgttgg tcccaagaaa agctcgtgag aattgtaaag tacttggtta cgatgtaacc
     1201 gaagggaccc aagtgtttgt taatgtttgg acaattggta gggatcctac attgtgggat
     1261 aaccctgatg aattttatcc tgatcgattt attggtaaaa atatcgacgt aaaaggtcac
     1321 gatttttcat tgttaccgtt tggttcggga cgaagaatgt gccccgggta cagtttaggg
     1381 ttaaaagtta ttgaattaac tttggctaat ttgttacacg ggtttaattg gaagttgccg
     1441 ggtacaatga ataaagacga tttggatatg aacgagatat ttggattatc gactccgaaa
     1501 aagttcccac ttgtcacagt tgctgaacca aggcttccag ttgaaatgta ccgtttttaa
     1561 tagtttattt tgttgtactg aaaatgattt aattatgtac ggtaggaata tgtgtcggtg
     1621 tgtcaatcgt aatgattata gtaagcgaaa gtcgtgtttc gtataatttg atgtatcgtt
     1681 aggagttcgt aacgaagctc ttaatgtttc atacatggac tcgtatagtc gtatgcactt
     1741 tttgaactaa ataatcctgt aactaaaatt tactaataat aaaaaaataa aa
//
LOCUS       XR_011778596             836 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903929), ncRNA.
ACCESSION   XR_011778596
VERSION     XR_011778596.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..836
                     /gene="LOC139903929"
                     /note="uncharacterized LOC139903929; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903929"
     ncRNA           1..836
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903929"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139903929"
ORIGIN      
        1 atttgattac ttggttctaa gcaacttcaa gaacattatt cttgaggttc gcatgttttt
       61 taacgtgtat ttttaacccg agttatgctg cggtggtttt tcaaactttt taaaactata
      121 atacgaaatg aatttataaa gttcgcataa tttgtgtaaa aattgaggct gcttatgttg
      181 attgattaaa gtttggctac agtgatcaat acaaaaaacg tagtgtttgt cttcagttcc
      241 cagtctcctt ttcttatcat tcaacataat atatttggtt tgactttcta tgttattgtt
      301 tgacttttta tgttgatatt caagataacc accatggttc ttgaactgtg aaaccacaag
      361 caaacaagta gagaagttgg caacacaatt caaagggatg gataatttgg tttttgcgaa
      421 gatagatgtt tctgaaacga gcacccgaaa ttggaggccg atgactatcc aagaattctg
      481 atctacccaa ttagcagcaa gccgaaccga attaactgcc tactaagttt aacgcgaaag
      541 aattggcgat actattaaca aatatttaaa agaacatgca tgatgagaaa catgtggaga
      601 aagacgagct ttggaatgat taggatgaga ttattatgac tacacaacgc gtaaaagggt
      661 aattatccga aaatcgaaaa tcgtgtaaac atattaccat tttaatcgtc tagagccggt
      721 gaaaggtcaa taaaaagagt aatgtagaaa tcgtatgcct gtcatttttt taaggtatta
      781 ggtggatgaa cattaaataa aaatcttatg tctgggaatt aatttctttg actgtc
//
LOCUS       XR_011778597             728 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903930), ncRNA.
ACCESSION   XR_011778597
VERSION     XR_011778597.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..728
                     /gene="LOC139903930"
                     /note="uncharacterized LOC139903930; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903930"
     ncRNA           1..728
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903930"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139903930"
ORIGIN      
        1 tatgacagaa agtgtgacga gcttatacac caatttgtaa aagatctcaa aactcatgtc
       61 atcgagaaaa ctcgagctat cgttaaagat ctttattcaa gaatcattgt tgcacttcat
      121 actgttgata ccatatcaaa aagggatcga gaaaatgagg gacgaagagt tgcaaccaca
      181 actcttagaa ctcattcagg gctattactg agatatccaa tttggtgcct ggatcaaatg
      241 ttgagctgtc tgaaaggtct tcttttgctc cgttgactcc tatgagacca atccggaaaa
      301 aggtagcgag tgctgatcga agggtgatgc tcgaatcctt tgtcaaaaaa tatagagcta
      361 tgaatctggg aaaattcccg tctccaacaa gtgcacaaaa agagctttga ttgtaatgcc
      421 cttgtgttat tggagaaaat gttgactctt gatccatcac gaggatttct gcaaaggatg
      481 cattggatgc tgaatatttc tgggctgacc cgttgccttg tgacccaaaa aggtttgctc
      541 tcattatcaa tatttcagtt ttcctactat ctccttatga gatgttttat tcctcaccaa
      601 ttagacatga tacgatactc atgtgacaat gtatacccat tgacttatta tctgcacatc
      661 attatgttaa cgggataatg atggaacagg gatctgctgt tgtaagagga aacacaacaa
      721 tttcaatt
//
LOCUS       XM_071885854            1711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NODULATION SIGNALING
            PATHWAY 1-like (LOC139903931), mRNA.
ACCESSION   XM_071885854
VERSION     XM_071885854.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1711
                     /gene="LOC139903931"
                     /note="protein NODULATION SIGNALING PATHWAY 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139903931"
     CDS             12..1655
                     /gene="LOC139903931"
                     /codon_start=1
                     /product="protein NODULATION SIGNALING PATHWAY 1-like"
                     /protein_id="XP_071741955.1"
                     /db_xref="GeneID:139903931"
                     /translation="MMKQDSLFFPCFPLNTTLMSDPTTLFDEPYPDMDSGHILTWLED
                     SMPQLPLILDDLYGSTDISIDNWWGPDLFDANTISISNSEDNLNSTFSSTIVSPPINS
                     VISFYDQPQEKVLESDVSKKRKAQEDRTLAPQAKRSVGNKKGTSKSIKDKNIISGNNK
                     DGRWAEQLLNPCAIAIANGNVTRVQHLLFVLQELASPTGDANYRLASHGMQALLRHLS
                     SATNKPAKEVGPTMTFATSTPKFFQRSLINFNDINPWFTIPNNIANNAILQILSEQDH
                     INASCNKTLHILDIGISHGFQWPTLLEALSRRPGGPPPLVRLTVVPPTPDNNQIPFAN
                     CPTGYDFASNILRYANDVNVNLKINKLDNCPLQNLDAQIIDSCPDETLIVCAQFRLHN
                     LNHNKPNTRTQFLTQLRSMKPKGVILSDNNMDCSCQYCNKFDARFSQSLDHLWSFLDS
                     TSIAFKGRDMEERKLLEGEAAKVLINTCEMNEKQEKWGERMNSVGFVDNAFSDDVVDQ
                     ARALLKKYDSHWEMRVGEKDGSVGLWWKGQPVSFSSLWK"
     misc_feature    504..1652
                     /gene="LOC139903931"
                     /note="GRAS domain family; Region: GRAS; pfam03514"
                     /db_xref="CDD:397536"
ORIGIN      
        1 ataaaccaaa aatgatgaag caagactcat tgttctttcc ttgttttccc ctaaacacaa
       61 ccttaatgtc ggatccaaca acgttgtttg atgaacccta tccagacatg gactcgggtc
      121 acatcttgac ctggttagaa gattcaatgc cgcagttgcc attgatccta gacgatctat
      181 atggctcgac ggatatcagt atcgataatt ggtggggccc ggaccttttt gatgctaata
      241 ctatctctat ttctaattct gaagacaatt taaacagtac tttcagcagt acaattgttt
      301 caccacccat taattctgtt attagtttct atgatcaacc acaagagaag gttttggagt
      361 ctgatgtgtc aaaaaaacga aaagcacaag aagatcgtac gctggcccca caagcgaaaa
      421 gatccgttgg aaacaagaaa ggaacaagca aatcgataaa ggataaaaat attattagtg
      481 gaaacaataa agacggtcga tgggctgagc agctgctgaa tccgtgtgcg atagcgattg
      541 ccaatggaaa cgtgacacgt gtccaacacc ttttattcgt tctccaagaa ctcgcttcac
      601 caactggaga cgctaattat aggctagctt ctcacgggat gcaagccctt cttcgacacc
      661 tgtcatctgc caccaacaag cctgcaaagg aagtgggccc caccatgact ttcgccacgt
      721 caacacctaa attcttccaa cgatctttaa taaactttaa cgacatcaat ccatggttca
      781 caatcccaaa caacattgca aacaacgcga tccttcaaat cttatcagaa caagatcata
      841 tcaacgcctc gtgtaacaag actcttcaca tactcgatat tgggatctct cacggatttc
      901 agtggcccac acttttagaa gcgttaagtc gaagaccagg gggcccacca ccgttggttc
      961 gccttactgt ggtcccacca acacctgata ataatcaaat tccctttgca aactgtccaa
     1021 ctggttacga tttcgcctca aacatcctcc gttatgctaa tgacgttaac gtgaatttaa
     1081 aaatcaacaa actcgacaac tgtcctttac aaaatttaga tgcgcaaatc atagattcat
     1141 gtccagacga aacattaatc gtatgcgctc agtttagatt acacaacctc aaccataaca
     1201 aacccaacac cagaacccaa ttcttgacac aattacgaag tatgaaacct aaaggagtga
     1261 tattaagtga caacaacatg gactgcagct gccagtattg caacaaattc gacgcgcgat
     1321 tttcacaaag tttagatcac ttgtggagct ttttggactc aaccagtata gcgtttaaag
     1381 gacgagatat ggaagaaagg aaacttctag aaggagaagc tgcaaaagta ctaatcaaca
     1441 catgtgaaat gaatgaaaag caagaaaaat ggggagaacg aatgaatagt gtcgggtttg
     1501 tagataacgc tttttctgac gatgttgtgg atcaagcacg agcgttgttg aaaaaatatg
     1561 atagtcactg ggaaatgaga gttggcgaaa aagatggatc ggtgggctta tggtggaaag
     1621 gacaaccagt ttcgtttagt tcgctatgga agtagatgca taaactagat aaaatcgtag
     1681 aacgattatt agtagaataa taagtcttta t
//
LOCUS       XM_071885855             817 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin-binding protein
            ABP19a-like (LOC139903932), mRNA.
ACCESSION   XM_071885855
VERSION     XM_071885855.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..817
                     /gene="LOC139903932"
                     /note="auxin-binding protein ABP19a-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139903932"
     CDS             63..698
                     /gene="LOC139903932"
                     /codon_start=1
                     /product="auxin-binding protein ABP19a-like"
                     /protein_id="XP_071741956.1"
                     /db_xref="GeneID:139903932"
                     /translation="MKMIHIFLTISSLFIISTNAAVQDFCVADLKAPESPAGYSCKPE
                     TIVTVDDFVSTSLRSSGNTSNIIKAAVSPAFAAQLPGLNGLGLSIARLDIAVGGVVPM
                     HTHPGGSELLLVTQGFIQAGFISSANTVYVKTLKKGDLMVFPQGLLHFQVNAGGVTAV
                     AYASFSSASPGLQILDFALFANDLPSKLVETTTFLPDATVKALKAVLGGTG"
     misc_feature    120..683
                     /gene="LOC139903932"
                     /note="Oxalate oxidase (germin), cupin domain; Region:
                     cupin_OxOx; cd02241"
                     /db_xref="CDD:380368"
     misc_feature    order(120..122,132..137,213..227,231..236,282..284,
                     297..299,318..329,387..389,393..395,399..401,405..407,
                     423..425,429..431,435..437,453..455,459..461,465..467,
                     474..488,492..494,501..503,546..548,552..554,558..560)
                     /gene="LOC139903932"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:380368"
     misc_feature    order(273..275,330..332,336..338,360..362,369..371,
                     375..377,390..392,507..509,543..545,555..557,576..578)
                     /gene="LOC139903932"
                     /note="active site"
                     /db_xref="CDD:380368"
ORIGIN      
        1 caaaatcata tcaaatatct catcatcaac catttaattc taataacatc acacatccca
       61 ttatgaaaat gatccacatt ttcttgacca tttcctctct tttcatcatc tcaactaatg
      121 ccgctgtcca agacttttgt gtcgcagacc taaaagcgcc cgaaagcccc gcaggctatt
      181 cttgcaaacc ggaaacaata gtcaccgttg atgacttcgt ctcaacgagc ttaaggtcct
      241 caggcaacac gtccaatatc atcaaagcag ccgtcagtcc agcatttgca gcccaacttc
      301 cgggcttaaa tgggcttggt ctctcaatag ctagattgga catagccgta ggtggcgtgg
      361 tcccaatgca cactcacccg ggtggttctg agctccttct ggtgacacaa gggtttattc
      421 aggccggttt tatctcatca gctaacacgg tttacgttaa gaccttaaag aagggtgatc
      481 tcatggtttt cccacaaggg ttgttgcatt ttcaagtgaa tgcaggaggt gttaccgccg
      541 ttgcgtacgc aagtttcagc agcgcgtcac ctggtttaca aattcttgat ttcgctttgt
      601 ttgcaaacga tttgccttcg aagttggttg aaactactac ttttcttcca gatgctacag
      661 tgaaggctct caaggctgtt cttggtggaa ccggctaatt gtgttgcatg ctaatttcaa
      721 gtactcacta ttcttttttt gttgattaat cacctgtctt tttttgtgtt tgtcatcaat
      781 aaactaatga tcatgacatt cactaattta atgtaat
//
LOCUS       XM_071885856            1206 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903933), transcript variant X1, mRNA.
ACCESSION   XM_071885856
VERSION     XM_071885856.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1206
                     /gene="LOC139903933"
                     /note="uncharacterized LOC139903933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139903933"
     CDS             58..987
                     /gene="LOC139903933"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071741957.1"
                     /db_xref="GeneID:139903933"
                     /translation="MTSSMAGVLPSSISSPKHILLHSSHRNLLSNSKSFSSPSIIKKP
                     SIICFSSKKGKPGFFDVILDYIEGGPKLRKWYGAPDLYAEDGSVLEKADESSEEDEVR
                     DAVLVTDGDNEIGQTVILSLIIKRIRVKALVKDKRAAMESFGTYVEPMTGDLKDPSFQ
                     KKSLRGVRAIICPSEGFLSTVESLKGIQHVVILSQLSVYKGSSGVQAIINSNARKLAE
                     QDESIVVSSGTPYTIVRTGLLTNDRRGKSGFSFEEGCTTNGSLSKEDAAFICIEALDV
                     VPEKGLIFEVVNGEEKVLNWKDQFARLMEQAQK"
     misc_feature    370..927
                     /gene="LOC139903933"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; Region:
                     Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
     misc_feature    order(382..384,388..393,397..399,454..462,574..579,
                     634..642,697..699,763..774)
                     /gene="LOC139903933"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:187535"
ORIGIN      
        1 gatggatggg aaacaaaata agaagcctta attaatactc atcacttcac ttcttgaatg
       61 acgtcatcaa tggcgggtgt tttaccttcg tcaatttctt ctccaaaaca catactctta
      121 cattcttcac accgcaatct tctttcaaat tctaaatcat tttcctctcc ttcaattatc
      181 aaaaaaccat ccatcatatg cttctcatcc aagaagggaa aaccgggttt tttcgacgta
      241 attctcgact atatcgaagg gggtccgaaa ttgagaaaat ggtatggggc acctgatctt
      301 tatgcagaag atggatccgt tttggaaaaa gcagatgaat cttcagaaga agatgaagtc
      361 agagatgcag ttttggttac agacggggac aatgagattg gtcagacggt tatattgtcg
      421 ttaataatta aacgaattag agttaaagcg ttagtgaagg acaagcgagc tgctatggaa
      481 tcatttggta cttatgtcga gccgatgacg ggagatctca aggatccttc atttcaaaag
      541 aaatccctga gaggtgttcg tgcaataata tgtcccagtg aaggtttcct atctacggtt
      601 gagagtttga aagggataca gcatgtggtt atattatctc agttgtctgt ttataaagga
      661 agtagcggtg ttcaagcaat cattaatagc aatgccagga agctagcaga gcaagatgaa
      721 tcgatagtag tttcgtcagg aactccttac actatagtca ggacggggct gcttacaaac
      781 gatcgtaggg gcaagtctgg tttcagtttt gaagagggtt gtacaacaaa tggaagtctt
      841 agcaaggaag acgctgcatt catatgcatt gaagctcttg atgtggtgcc cgaaaaagga
      901 ctgatatttg aggttgttaa tggggaagaa aaggttctga attggaaaga ccaatttgca
      961 agattgatgg agcaagcaca gaaatgactt caagaacctc aatggggtga ctatagtgtg
     1021 tttcgtgttc attcatttca ttgttatcca cgattaaata tttaaatata atatagtaca
     1081 taaaaagaac gattcacctt ttttattgtt ctatgaatat gaaactagtt ttgttattgt
     1141 tctgtattct agtagtatta cataatctgt ttttggaatc aatgagaatt agttaaggtg
     1201 atgatt
//
LOCUS       XM_071885857            1204 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903933), transcript variant X2, mRNA.
ACCESSION   XM_071885857
VERSION     XM_071885857.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1204
                     /gene="LOC139903933"
                     /note="uncharacterized LOC139903933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903933"
     CDS             58..984
                     /gene="LOC139903933"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071741958.1"
                     /db_xref="GeneID:139903933"
                     /translation="MTSSMAGVLPSSISSPKHILLHSSHRNLLSNSKSFSSPSIIKKP
                     SIICFSSKKGKPGFFDVILDYIEGGPKLRKWYGAPDLYAEDGSVLEKADESSEDEVRD
                     AVLVTDGDNEIGQTVILSLIIKRIRVKALVKDKRAAMESFGTYVEPMTGDLKDPSFQK
                     KSLRGVRAIICPSEGFLSTVESLKGIQHVVILSQLSVYKGSSGVQAIINSNARKLAEQ
                     DESIVVSSGTPYTIVRTGLLTNDRRGKSGFSFEEGCTTNGSLSKEDAAFICIEALDVV
                     PEKGLIFEVVNGEEKVLNWKDQFARLMEQAQK"
     misc_feature    367..924
                     /gene="LOC139903933"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; Region:
                     Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
     misc_feature    order(379..381,385..390,394..396,451..459,571..576,
                     631..639,694..696,760..771)
                     /gene="LOC139903933"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:187535"
ORIGIN      
        1 gatggatggg aaacaaaata agaagcctta attaatactc atcacttcac ttcttgaatg
       61 acgtcatcaa tggcgggtgt tttaccttcg tcaatttctt ctccaaaaca catactctta
      121 cattcttcac accgcaatct tctttcaaat tctaaatcat tttcctctcc ttcaattatc
      181 aaaaaaccat ccatcatatg cttctcatcc aagaagggaa aaccgggttt tttcgacgta
      241 attctcgact atatcgaagg gggtccgaaa ttgagaaaat ggtatggggc acctgatctt
      301 tatgcagaag atggatccgt tttggaaaaa gcagatgaat cttcagaaga tgaagtcaga
      361 gatgcagttt tggttacaga cggggacaat gagattggtc agacggttat attgtcgtta
      421 ataattaaac gaattagagt taaagcgtta gtgaaggaca agcgagctgc tatggaatca
      481 tttggtactt atgtcgagcc gatgacggga gatctcaagg atccttcatt tcaaaagaaa
      541 tccctgagag gtgttcgtgc aataatatgt cccagtgaag gtttcctatc tacggttgag
      601 agtttgaaag ggatacagca tgtggttata ttatctcagt tgtctgttta taaaggaagt
      661 agcggtgttc aagcaatcat taatagcaat gccaggaagc tagcagagca agatgaatcg
      721 atagtagttt cgtcaggaac tccttacact atagtcagga cggggctgct tacaaacgat
      781 cgtaggggca agtctggttt cagttttgaa gagggttgta caacaaatgg aagtcttagc
      841 aaggaagacg ctgcattcat atgcattgaa gctcttgatg tggtgcccga aaaaggactg
      901 atatttgagg ttgttaatgg ggaagaaaag gttctgaatt ggaaagacca atttgcaaga
      961 ttgatggagc aagcacagaa atgacttcaa gaacctcaat ggggtgacta tagtgtgttt
     1021 cgtgttcatt catttcattg ttatccacga ttaaatattt aaatataata tagtacataa
     1081 aaagaacgat tcaccttttt tattgttcta tgaatatgaa actagttttg ttattgttct
     1141 gtattctagt agtattacat aatctgtttt tggaatcaat gagaattagt taaggtgatg
     1201 atta
//
LOCUS       XM_071885858            1056 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYB114-like (LOC139903934), mRNA.
ACCESSION   XM_071885858
VERSION     XM_071885858.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1056
                     /gene="LOC139903934"
                     /note="transcription factor MYB114-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139903934"
     CDS             150..734
                     /gene="LOC139903934"
                     /codon_start=1
                     /product="transcription factor MYB114-like"
                     /protein_id="XP_071741959.1"
                     /db_xref="GeneID:139903934"
                     /translation="MDPKTAKSSMKEVNRGAWTAEEDEKLAEAIEIHGPKKWTVIATK
                     AGLQRCGKSCRLRWLNYLRPNIKRGNISDQEEDLIIRLHKLLGNRWSLIAGRLPGRTD
                     NEIKNYWNSHLSKKKEIVEKRTDRYSTRSETKLGEMVDKKMKEDDGTGVEKHGVESSK
                     FSFNVDEFFDFSNEDPMTLDWVNRYIAGTSGVFL"
     misc_feature    180..>497
                     /gene="LOC139903934"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03091"
                     /db_xref="CDD:215570"
ORIGIN      
        1 agtgctctcc tgtagagcat atttagatta tctacctaca gtttccatct acagaagcac
       61 acagcatagc aaacatacgc aataattcac gggtcgcata taaatgacta tctaagtgct
      121 tcaccgagaa acacagcttt ctccagcgaa tggacccgaa aacagctaaa tcttcaatga
      181 aagaagtcaa taggggagca tggacagcag aagaagacga aaagctagct gaagctatag
      241 agatacacgg tcctaaaaaa tggacagtta ttgctacaaa agcaggtttg cagaggtgtg
      301 gaaagagttg cagactaaga tggttaaatt atttgagacc gaatatcaaa cgaggaaata
      361 tatcagatca agaagaagac ttgattatca ggcttcataa acttttagga aacaggtggt
      421 cattgattgc gggaagacta ccagggcgaa ccgataatga gatcaagaac tattggaatt
      481 ctcatttaag caaaaagaag gaaattgtgg aaaaacgaac cgatcggtat tcaacgagaa
      541 gcgagaccaa gttaggtgag atggttgaca agaagatgaa agaagatgat gggactggtg
      601 tagagaaaca tggagttgaa tcttcaaagt ttagtttcaa cgttgacgag ttttttgatt
      661 tctcgaatga ggacccgatg accttggatt gggttaacag gtacattgct ggtaccagtg
      721 gtgtattttt gtagtgcgtg ttccaacacc aacgcatcat cttgttcaga tgctcggcaa
      781 ttgaggaccc gatgacttcg gattggcgta acagttgcat tgctggtacc tgtggtgtat
      841 ttctgtagtg caatttcatc tcagtctgca tctatttcag gcgttcaagc gaatttcagg
      901 ctatatgttt acgattaatg ttgtagtaat agttaagtat tccagatttc gaagttgttt
      961 tgatgcttct atctgtgaca gtgtagataa cttagattta tcggaaatgg ttctgtccaa
     1021 ccggcgttat acaaactatg tttatactat atgaaa
//
LOCUS       XR_011778598             478 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903936), transcript variant X1, ncRNA.
ACCESSION   XR_011778598
VERSION     XR_011778598.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..478
                     /gene="LOC139903936"
                     /note="uncharacterized LOC139903936; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903936"
     ncRNA           1..478
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903936"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139903936"
ORIGIN      
        1 gactgttgtt ttagagtttt ttggtgaaaa tatcgtgatt tacacttgcc taatcgtagc
       61 actgttgcct caaactctat cttggctata agtgatttag aagaatggga tcattagtgt
      121 gcatgagaga ccatttctat acatttgcgg cgtgtcacaa cctgttcatc accgcttatc
      181 tgatttttca atacgaagct gataggttat tattgaggtg taaccaactt cacgaggtta
      241 ctaatttgac atgttagatg tcaaatttat gagaaagggc aacttggttt ttggtatata
      301 atatattgaa gaatggtata tctttaaaat gaagttcttg gatgctattc tgaagctttt
      361 gagcaaattc gtccagatat ccagcaagtt atttaaatcg acaaacacac tgaaatcagg
      421 tcaaacgctc taatgggtta tttgtgttgt ggtggtggct ctcaatgtaa ctattggt
//
LOCUS       XR_011778599             496 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903936), transcript variant X2, ncRNA.
ACCESSION   XR_011778599
VERSION     XR_011778599.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..496
                     /gene="LOC139903936"
                     /note="uncharacterized LOC139903936; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903936"
     ncRNA           1..496
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903936"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139903936"
ORIGIN      
        1 tgactgttgt tttagagttt tttggtgaaa atatcgtgat ttacacttgc ctaatcgtag
       61 cactgttgcc tcaaactcta tcttggctat aagtgattta gaagaatggg atcattagtg
      121 tgcatgagag accatttcta tacatttgcg gcgtgtcaca acctgttcat caccgcttat
      181 ctgatttttc aatacgaagc tgataggtta ttattgagaa tatccaaata tccaggtgta
      241 accaacttca cgaggttact aatttgacat gttagatgtc aaatttatga gaaagggcaa
      301 cttggttttt ggtatataat atattgaaga atggtatatc tttaaaatga agttcttgga
      361 tgctattctg aagcttttga gcaaattcgt ccagatatcc agcaagttat ttaaatcgac
      421 aaacacactg aaatcaggtc aaacgctcta atgggttatt tgtgttgtgg tggtggctct
      481 caatgtaact attggt
//
LOCUS       XM_071885859            2253 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903937), transcript variant X1, mRNA.
ACCESSION   XM_071885859
VERSION     XM_071885859.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2253
                     /gene="LOC139903937"
                     /note="uncharacterized LOC139903937; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903937"
     CDS             374..2119
                     /gene="LOC139903937"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071741960.1"
                     /db_xref="GeneID:139903937"
                     /translation="MTCSDSSKKIVDPVVYKLARVVGDEIYIPATDDEVMKFEDLIDH
                     NSSLQCVKGDGQTAACISNDDIFGQEFMHIDFEGLLDFEDSFDDDGGRSDAIVDPAVD
                     LREVNHQYEEVTQSESTPVDVQIEQSWDRKQADPPKGAAESEPSTSTTGAGSNPDFCK
                     PNGDICLDNLTVRELQATFKTTLGKETNVKDKQWLKRKILMGLSSSCDVSATNHYIVE
                     NNKVKKKGKIQELNNKDENLNEVSQTIQMEDDFSGNRKSVQSSMSKYHIAVEDDDNHA
                     SKRVRKPTKRYIEVSESDSLEYSGRPVSSVKSSGHGTRNRVRSIHNIQPVRRHFVTRH
                     DSLGGFGVKIPYVSRIRRGRPRENFMSLMKFQSCGMGNTSKPVNKALDEQDRLSDHEI
                     ENHELKTTPTTGWVQQPLIKEAGEHEQYSEQSGELNNDSDEGLVDSYSEDDSDDSILT
                     VPTAKGGMRRKHHRPWTLNEVVKLVEGVSRYGAGRWSEIKKIAFATCSHRTSVDLKDK
                     WRNLLRVSFTQLHADKEQVQNSKKHASTPIPIPILLRVRELAEIQPKVSPVMSALKFE
                     ARSSRKLNNIRSGFL"
     misc_feature    1763..1915
                     /gene="LOC139903937"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; Region: SANT_TRF;
                     cd11660"
                     /db_xref="CDD:212558"
     misc_feature    order(1763..1771,1823..1825,1829..1834,1871..1873,
                     1877..1885,1889..1897,1901..1906)
                     /gene="LOC139903937"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
ORIGIN      
        1 actcaagaaa aagctatttt agattccggg cgccaatcca acatcaaact acccaattta
       61 tttttcattt actgtataaa tataaatata taaattaatt ataaatccga acctgtattt
      121 catcgatata cacagcgtac cgtaaaagcg ccactgaact caaatccagc aaattatcaa
      181 tttcatcccc gctttcgaaa ccctaatttt caaattccca acatccgaat ttcagttctg
      241 acgaaaccac tcgataaata cacatttttg ttttttgtga atttgagctg catgtggtgg
      301 aatgttatat ggaaactgtg gtagcagttg aagaaattga tagaagtaag gttagtgtgc
      361 ttctgcaatt gtaatgacgt gcagtgattc ctcaaagaag attgttgatc ctgttgttta
      421 caaacttgct cgggttgtgg gtgatgagat atatatacct gcaactgatg atgaagtgat
      481 gaagtttgaa gacttgattg atcataacag ttcactgcaa tgcgttaagg gcgatggtca
      541 gactgcagcc tgcatttcaa atgatgacat ttttggtcag gagttcatgc acattgactt
      601 tgaaggcctc ttggattttg aggactcttt tgacgatgat ggaggaagat cagatgccat
      661 agttgaccca gcagttgatc tcagggaagt gaatcaccaa tatgaggaag ttactcaatc
      721 agagtcaact cccgttgatg tccagattga acaatcttgg gacagaaagc aagcagaccc
      781 tcctaaggga gcagccgaga gcgagccgtc aacttcaacc acgggtgctg gttcgaaccc
      841 tgatttctgt aaaccgaacg gggatatatg cctggacaat cttacagtta gagaacttca
      901 agcaactttt aagactacac ttggcaagga aactaatgtg aaggacaagc agtggctcaa
      961 gagaaagatt cttatggggt tgtcgagttc ttgtgatgtt tcagctacta atcattatat
     1021 agttgaaaat aacaaagtta aaaagaaagg aaaaatacaa gagttgaata acaaggatga
     1081 gaatcttaat gaggttagtc aaactattca aatggaagat gatttcagtg gaaacagaaa
     1141 aagtgtgcaa agttctatgt ccaagtatca tattgctgtc gaagatgatg acaaccatgc
     1201 ttctaaaaga gttcggaagc ccacaaagcg ctatatcgaa gtatcagaat cagactcact
     1261 tgaatatagt ggtagaccag tttcttctgt caaaagttct ggacatggaa cacgaaatcg
     1321 tgtccggtct attcataata tccaaccagt taggagacat tttgtaactc gtcacgattc
     1381 tcttggaggt ttcggggtta aaattccata tgtttccagg attcgaagag ggcgcccaag
     1441 agagaatttt atgtcactaa tgaaatttca atcatgtgga atggggaaca catcaaagcc
     1501 ggtaaataag gcccttgatg aacaagatcg tctgtcggat cacgaaatag agaatcatga
     1561 actcaaaact acaccgacta ctggttgggt tcaacagcct ctaattaagg aagcaggaga
     1621 acatgaacaa tactcggagc aatcgggcga attaaacaat gattcagatg aaggtctggt
     1681 ggattcatat tcagaagatg attcagatga tagtatatta actgtgccaa cagcaaaagg
     1741 tgggatgcga aggaaacatc atcgaccatg gactcttaat gaagtggtta aattagttga
     1801 aggtgtttct aggtatggtg ctggcaggtg gtctgagata aagaagatag cttttgcaac
     1861 atgctcacac cgtacatcag ttgatctcaa agacaagtgg aggaacttgc tgagagtgag
     1921 tttcacacag ttacatgctg ataaagagca ggtacaaaac tctaagaagc atgcatcaac
     1981 tccgatcccg ataccaattc tgttaagagt gagagagctt gcagaaatac aaccaaaggt
     2041 gagtccagtt atgagcgcct tgaaatttga ggcacgtagt agtagaaagt taaataatat
     2101 aaggtctgga tttttgtagt agtgtaaatt gcttgttgga gttaactgaa gctaggaatc
     2161 gaatgtctaa ttgtttaata tacttattaa tgatggttta tttgcatgtt ggttctatgt
     2221 attttgtaga ttattcctgt taacttttta ata
//
LOCUS       XM_071885860            2388 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903937), transcript variant X2, mRNA.
ACCESSION   XM_071885860
VERSION     XM_071885860.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2388
                     /gene="LOC139903937"
                     /note="uncharacterized LOC139903937; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903937"
     CDS             509..2254
                     /gene="LOC139903937"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071741961.1"
                     /db_xref="GeneID:139903937"
                     /translation="MTCSDSSKKIVDPVVYKLARVVGDEIYIPATDDEVMKFEDLIDH
                     NSSLQCVKGDGQTAACISNDDIFGQEFMHIDFEGLLDFEDSFDDDGGRSDAIVDPAVD
                     LREVNHQYEEVTQSESTPVDVQIEQSWDRKQADPPKGAAESEPSTSTTGAGSNPDFCK
                     PNGDICLDNLTVRELQATFKTTLGKETNVKDKQWLKRKILMGLSSSCDVSATNHYIVE
                     NNKVKKKGKIQELNNKDENLNEVSQTIQMEDDFSGNRKSVQSSMSKYHIAVEDDDNHA
                     SKRVRKPTKRYIEVSESDSLEYSGRPVSSVKSSGHGTRNRVRSIHNIQPVRRHFVTRH
                     DSLGGFGVKIPYVSRIRRGRPRENFMSLMKFQSCGMGNTSKPVNKALDEQDRLSDHEI
                     ENHELKTTPTTGWVQQPLIKEAGEHEQYSEQSGELNNDSDEGLVDSYSEDDSDDSILT
                     VPTAKGGMRRKHHRPWTLNEVVKLVEGVSRYGAGRWSEIKKIAFATCSHRTSVDLKDK
                     WRNLLRVSFTQLHADKEQVQNSKKHASTPIPIPILLRVRELAEIQPKVSPVMSALKFE
                     ARSSRKLNNIRSGFL"
     misc_feature    1898..2050
                     /gene="LOC139903937"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; Region: SANT_TRF;
                     cd11660"
                     /db_xref="CDD:212558"
     misc_feature    order(1898..1906,1958..1960,1964..1969,2006..2008,
                     2012..2020,2024..2032,2036..2041)
                     /gene="LOC139903937"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
ORIGIN      
        1 actcaagaaa aagctatttt agattccggg cgccaatcca acatcaaact acccaattta
       61 tttttcattt actgtataaa tataaatata taaattaatt ataaatccga acctgtattt
      121 catcgatata cacagcgtac cgtaaaagcg ccactgaact caaatccagc aaattatcaa
      181 tttcatcccc gctttcgaaa ccctaatttt caaattccca acatccgaat ttcagttctg
      241 acgaaaccac tcgataaata cacatttttg gtgagtttgt acgattgaaa catttattat
      301 tacaaatatt gagttaatta ggttttctta agtgaattga tgatgaatgt gaaattgaag
      361 gagtgaggaa gcttgaatcg gattgatcta tattttaatt ttcagttttt tgtgaatttg
      421 agctgcatgt ggtggaatgt tatatggaaa ctgtggtagc agttgaagaa attgatagaa
      481 gtaaggttag tgtgcttctg caattgtaat gacgtgcagt gattcctcaa agaagattgt
      541 tgatcctgtt gtttacaaac ttgctcgggt tgtgggtgat gagatatata tacctgcaac
      601 tgatgatgaa gtgatgaagt ttgaagactt gattgatcat aacagttcac tgcaatgcgt
      661 taagggcgat ggtcagactg cagcctgcat ttcaaatgat gacatttttg gtcaggagtt
      721 catgcacatt gactttgaag gcctcttgga ttttgaggac tcttttgacg atgatggagg
      781 aagatcagat gccatagttg acccagcagt tgatctcagg gaagtgaatc accaatatga
      841 ggaagttact caatcagagt caactcccgt tgatgtccag attgaacaat cttgggacag
      901 aaagcaagca gaccctccta agggagcagc cgagagcgag ccgtcaactt caaccacggg
      961 tgctggttcg aaccctgatt tctgtaaacc gaacggggat atatgcctgg acaatcttac
     1021 agttagagaa cttcaagcaa cttttaagac tacacttggc aaggaaacta atgtgaagga
     1081 caagcagtgg ctcaagagaa agattcttat ggggttgtcg agttcttgtg atgtttcagc
     1141 tactaatcat tatatagttg aaaataacaa agttaaaaag aaaggaaaaa tacaagagtt
     1201 gaataacaag gatgagaatc ttaatgaggt tagtcaaact attcaaatgg aagatgattt
     1261 cagtggaaac agaaaaagtg tgcaaagttc tatgtccaag tatcatattg ctgtcgaaga
     1321 tgatgacaac catgcttcta aaagagttcg gaagcccaca aagcgctata tcgaagtatc
     1381 agaatcagac tcacttgaat atagtggtag accagtttct tctgtcaaaa gttctggaca
     1441 tggaacacga aatcgtgtcc ggtctattca taatatccaa ccagttagga gacattttgt
     1501 aactcgtcac gattctcttg gaggtttcgg ggttaaaatt ccatatgttt ccaggattcg
     1561 aagagggcgc ccaagagaga attttatgtc actaatgaaa tttcaatcat gtggaatggg
     1621 gaacacatca aagccggtaa ataaggccct tgatgaacaa gatcgtctgt cggatcacga
     1681 aatagagaat catgaactca aaactacacc gactactggt tgggttcaac agcctctaat
     1741 taaggaagca ggagaacatg aacaatactc ggagcaatcg ggcgaattaa acaatgattc
     1801 agatgaaggt ctggtggatt catattcaga agatgattca gatgatagta tattaactgt
     1861 gccaacagca aaaggtggga tgcgaaggaa acatcatcga ccatggactc ttaatgaagt
     1921 ggttaaatta gttgaaggtg tttctaggta tggtgctggc aggtggtctg agataaagaa
     1981 gatagctttt gcaacatgct cacaccgtac atcagttgat ctcaaagaca agtggaggaa
     2041 cttgctgaga gtgagtttca cacagttaca tgctgataaa gagcaggtac aaaactctaa
     2101 gaagcatgca tcaactccga tcccgatacc aattctgtta agagtgagag agcttgcaga
     2161 aatacaacca aaggtgagtc cagttatgag cgccttgaaa tttgaggcac gtagtagtag
     2221 aaagttaaat aatataaggt ctggattttt gtagtagtgt aaattgcttg ttggagttaa
     2281 ctgaagctag gaatcgaatg tctaattgtt taatatactt attaatgatg gtttatttgc
     2341 atgttggttc tatgtatttt gtagattatt cctgttaact ttttaata
//
LOCUS       XM_071885861            2236 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903937), transcript variant X3, mRNA.
ACCESSION   XM_071885861
VERSION     XM_071885861.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2236
                     /gene="LOC139903937"
                     /note="uncharacterized LOC139903937; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903937"
     CDS             357..2102
                     /gene="LOC139903937"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071741962.1"
                     /db_xref="GeneID:139903937"
                     /translation="MTCSDSSKKIVDPVVYKLARVVGDEIYIPATDDEVMKFEDLIDH
                     NSSLQCVKGDGQTAACISNDDIFGQEFMHIDFEGLLDFEDSFDDDGGRSDAIVDPAVD
                     LREVNHQYEEVTQSESTPVDVQIEQSWDRKQADPPKGAAESEPSTSTTGAGSNPDFCK
                     PNGDICLDNLTVRELQATFKTTLGKETNVKDKQWLKRKILMGLSSSCDVSATNHYIVE
                     NNKVKKKGKIQELNNKDENLNEVSQTIQMEDDFSGNRKSVQSSMSKYHIAVEDDDNHA
                     SKRVRKPTKRYIEVSESDSLEYSGRPVSSVKSSGHGTRNRVRSIHNIQPVRRHFVTRH
                     DSLGGFGVKIPYVSRIRRGRPRENFMSLMKFQSCGMGNTSKPVNKALDEQDRLSDHEI
                     ENHELKTTPTTGWVQQPLIKEAGEHEQYSEQSGELNNDSDEGLVDSYSEDDSDDSILT
                     VPTAKGGMRRKHHRPWTLNEVVKLVEGVSRYGAGRWSEIKKIAFATCSHRTSVDLKDK
                     WRNLLRVSFTQLHADKEQVQNSKKHASTPIPIPILLRVRELAEIQPKVSPVMSALKFE
                     ARSSRKLNNIRSGFL"
     misc_feature    1746..1898
                     /gene="LOC139903937"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; Region: SANT_TRF;
                     cd11660"
                     /db_xref="CDD:212558"
     misc_feature    order(1746..1754,1806..1808,1812..1817,1854..1856,
                     1860..1868,1872..1880,1884..1889)
                     /gene="LOC139903937"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
ORIGIN      
        1 actcaagaaa aagctatttt agattccggg cgccaatcca acatcaaact acccaattta
       61 tttttcattt actgtataaa tataaatata taaattaatt ataaatccga acctgtattt
      121 catcgatata cacagcgtac cgtaaaagcg ccactgaact caaatccagc aaattatcaa
      181 tttcatcccc gctttcgaaa ccctaatttt caaattccca acatccgaat ttcagttctg
      241 acgaaaccac tcgataaata cacatttttg ctgcatgtgg tggaatgtta tatggaaact
      301 gtggtagcag ttgaagaaat tgatagaagt aaggttagtg tgcttctgca attgtaatga
      361 cgtgcagtga ttcctcaaag aagattgttg atcctgttgt ttacaaactt gctcgggttg
      421 tgggtgatga gatatatata cctgcaactg atgatgaagt gatgaagttt gaagacttga
      481 ttgatcataa cagttcactg caatgcgtta agggcgatgg tcagactgca gcctgcattt
      541 caaatgatga catttttggt caggagttca tgcacattga ctttgaaggc ctcttggatt
      601 ttgaggactc ttttgacgat gatggaggaa gatcagatgc catagttgac ccagcagttg
      661 atctcaggga agtgaatcac caatatgagg aagttactca atcagagtca actcccgttg
      721 atgtccagat tgaacaatct tgggacagaa agcaagcaga ccctcctaag ggagcagccg
      781 agagcgagcc gtcaacttca accacgggtg ctggttcgaa ccctgatttc tgtaaaccga
      841 acggggatat atgcctggac aatcttacag ttagagaact tcaagcaact tttaagacta
      901 cacttggcaa ggaaactaat gtgaaggaca agcagtggct caagagaaag attcttatgg
      961 ggttgtcgag ttcttgtgat gtttcagcta ctaatcatta tatagttgaa aataacaaag
     1021 ttaaaaagaa aggaaaaata caagagttga ataacaagga tgagaatctt aatgaggtta
     1081 gtcaaactat tcaaatggaa gatgatttca gtggaaacag aaaaagtgtg caaagttcta
     1141 tgtccaagta tcatattgct gtcgaagatg atgacaacca tgcttctaaa agagttcgga
     1201 agcccacaaa gcgctatatc gaagtatcag aatcagactc acttgaatat agtggtagac
     1261 cagtttcttc tgtcaaaagt tctggacatg gaacacgaaa tcgtgtccgg tctattcata
     1321 atatccaacc agttaggaga cattttgtaa ctcgtcacga ttctcttgga ggtttcgggg
     1381 ttaaaattcc atatgtttcc aggattcgaa gagggcgccc aagagagaat tttatgtcac
     1441 taatgaaatt tcaatcatgt ggaatgggga acacatcaaa gccggtaaat aaggcccttg
     1501 atgaacaaga tcgtctgtcg gatcacgaaa tagagaatca tgaactcaaa actacaccga
     1561 ctactggttg ggttcaacag cctctaatta aggaagcagg agaacatgaa caatactcgg
     1621 agcaatcggg cgaattaaac aatgattcag atgaaggtct ggtggattca tattcagaag
     1681 atgattcaga tgatagtata ttaactgtgc caacagcaaa aggtgggatg cgaaggaaac
     1741 atcatcgacc atggactctt aatgaagtgg ttaaattagt tgaaggtgtt tctaggtatg
     1801 gtgctggcag gtggtctgag ataaagaaga tagcttttgc aacatgctca caccgtacat
     1861 cagttgatct caaagacaag tggaggaact tgctgagagt gagtttcaca cagttacatg
     1921 ctgataaaga gcaggtacaa aactctaaga agcatgcatc aactccgatc ccgataccaa
     1981 ttctgttaag agtgagagag cttgcagaaa tacaaccaaa ggtgagtcca gttatgagcg
     2041 ccttgaaatt tgaggcacgt agtagtagaa agttaaataa tataaggtct ggatttttgt
     2101 agtagtgtaa attgcttgtt ggagttaact gaagctagga atcgaatgtc taattgttta
     2161 atatacttat taatgatggt ttatttgcat gttggttcta tgtattttgt agattattcc
     2221 tgttaacttt ttaata
//
LOCUS       XM_071885864            2250 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903937), transcript variant X4, mRNA.
ACCESSION   XM_071885864
VERSION     XM_071885864.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2250
                     /gene="LOC139903937"
                     /note="uncharacterized LOC139903937; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903937"
     CDS             374..2116
                     /gene="LOC139903937"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071741965.1"
                     /db_xref="GeneID:139903937"
                     /translation="MTCSDSSKKIVDPVVYKLARVVGDEIYIPATDDEVMKFEDLIDH
                     NSSLQCVKGDGQTAACISNDDIFGQEFMHIDFEGLLDFEDSFDDDGGRSDAIVDPAVD
                     LREVNHQYEEVTQSESTPVDVQIEQSWDRKQADPPKGAAESEPSTSTTGAGSNPDFCK
                     PNGDICLDNLTVRELQATFKTTLGKETNVKDKQWLKRKILMGLSSSCDVSATNHYIVE
                     NNKVKKKGKIQELNNKDENLNEVSQTIQMEDDFSGNRKSVQSSMSKYHIAVEDDDNHA
                     SKRVRKPTKRYIEVSESDSLEYSGRPVSSVKSSGHGTRNRVRSIHNIQPVRRHFVTRH
                     DSLGGFGVKIPYVSRIRRGRPRENFMSLMKFQSCGMGNTSKPVNKALDEQDRLSDHEI
                     ENHELKTTPTTGWVQQPLIKEAGEHEQYSEQSGELNNDSDEGLVDSYSEDDSDDSILT
                     VPTAKGGMRRKHHRPWTLNEVVKLVEGVSRYGAGRWSEIKKIAFATCSHRTSVDLKDK
                     WRNLLRVSFTQLHADKEVQNSKKHASTPIPIPILLRVRELAEIQPKVSPVMSALKFEA
                     RSSRKLNNIRSGFL"
     misc_feature    1763..1915
                     /gene="LOC139903937"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; Region: SANT_TRF;
                     cd11660"
                     /db_xref="CDD:212558"
     misc_feature    order(1763..1771,1823..1825,1829..1834,1871..1873,
                     1877..1885,1889..1897,1901..1906)
                     /gene="LOC139903937"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
ORIGIN      
        1 actcaagaaa aagctatttt agattccggg cgccaatcca acatcaaact acccaattta
       61 tttttcattt actgtataaa tataaatata taaattaatt ataaatccga acctgtattt
      121 catcgatata cacagcgtac cgtaaaagcg ccactgaact caaatccagc aaattatcaa
      181 tttcatcccc gctttcgaaa ccctaatttt caaattccca acatccgaat ttcagttctg
      241 acgaaaccac tcgataaata cacatttttg ttttttgtga atttgagctg catgtggtgg
      301 aatgttatat ggaaactgtg gtagcagttg aagaaattga tagaagtaag gttagtgtgc
      361 ttctgcaatt gtaatgacgt gcagtgattc ctcaaagaag attgttgatc ctgttgttta
      421 caaacttgct cgggttgtgg gtgatgagat atatatacct gcaactgatg atgaagtgat
      481 gaagtttgaa gacttgattg atcataacag ttcactgcaa tgcgttaagg gcgatggtca
      541 gactgcagcc tgcatttcaa atgatgacat ttttggtcag gagttcatgc acattgactt
      601 tgaaggcctc ttggattttg aggactcttt tgacgatgat ggaggaagat cagatgccat
      661 agttgaccca gcagttgatc tcagggaagt gaatcaccaa tatgaggaag ttactcaatc
      721 agagtcaact cccgttgatg tccagattga acaatcttgg gacagaaagc aagcagaccc
      781 tcctaaggga gcagccgaga gcgagccgtc aacttcaacc acgggtgctg gttcgaaccc
      841 tgatttctgt aaaccgaacg gggatatatg cctggacaat cttacagtta gagaacttca
      901 agcaactttt aagactacac ttggcaagga aactaatgtg aaggacaagc agtggctcaa
      961 gagaaagatt cttatggggt tgtcgagttc ttgtgatgtt tcagctacta atcattatat
     1021 agttgaaaat aacaaagtta aaaagaaagg aaaaatacaa gagttgaata acaaggatga
     1081 gaatcttaat gaggttagtc aaactattca aatggaagat gatttcagtg gaaacagaaa
     1141 aagtgtgcaa agttctatgt ccaagtatca tattgctgtc gaagatgatg acaaccatgc
     1201 ttctaaaaga gttcggaagc ccacaaagcg ctatatcgaa gtatcagaat cagactcact
     1261 tgaatatagt ggtagaccag tttcttctgt caaaagttct ggacatggaa cacgaaatcg
     1321 tgtccggtct attcataata tccaaccagt taggagacat tttgtaactc gtcacgattc
     1381 tcttggaggt ttcggggtta aaattccata tgtttccagg attcgaagag ggcgcccaag
     1441 agagaatttt atgtcactaa tgaaatttca atcatgtgga atggggaaca catcaaagcc
     1501 ggtaaataag gcccttgatg aacaagatcg tctgtcggat cacgaaatag agaatcatga
     1561 actcaaaact acaccgacta ctggttgggt tcaacagcct ctaattaagg aagcaggaga
     1621 acatgaacaa tactcggagc aatcgggcga attaaacaat gattcagatg aaggtctggt
     1681 ggattcatat tcagaagatg attcagatga tagtatatta actgtgccaa cagcaaaagg
     1741 tgggatgcga aggaaacatc atcgaccatg gactcttaat gaagtggtta aattagttga
     1801 aggtgtttct aggtatggtg ctggcaggtg gtctgagata aagaagatag cttttgcaac
     1861 atgctcacac cgtacatcag ttgatctcaa agacaagtgg aggaacttgc tgagagtgag
     1921 tttcacacag ttacatgctg ataaagaggt acaaaactct aagaagcatg catcaactcc
     1981 gatcccgata ccaattctgt taagagtgag agagcttgca gaaatacaac caaaggtgag
     2041 tccagttatg agcgccttga aatttgaggc acgtagtagt agaaagttaa ataatataag
     2101 gtctggattt ttgtagtagt gtaaattgct tgttggagtt aactgaagct aggaatcgaa
     2161 tgtctaattg tttaatatac ttattaatga tggtttattt gcatgttggt tctatgtatt
     2221 ttgtagatta ttcctgttaa ctttttaata
//
LOCUS       XM_071885865            1932 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            EXO70A1-like (LOC139903938), mRNA.
ACCESSION   XM_071885865
VERSION     XM_071885865.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1932
                     /gene="LOC139903938"
                     /note="exocyst complex component EXO70A1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139903938"
     CDS             1..1842
                     /gene="LOC139903938"
                     /codon_start=1
                     /product="exocyst complex component EXO70A1-like"
                     /protein_id="XP_071741966.1"
                     /db_xref="GeneID:139903938"
                     /translation="MEPPGTDSSAAEQIILRWDSMASEDARYQMIFEGDRDEINRYLQ
                     AVDQLQRSMDSNTLSENQSTKVNNAIQIAMARLEDEFRNILITNSTPIETEPLIDSVS
                     LTPRTTPRTSSCRSDSPENEHNSEKRTESISKITSASFNERNERSTTFASCRSMNSIR
                     EQDLIPAESISDLREIAERMIAAGYFRECVQVYGSVRKSVVDGSFKKLGVEKLSIGDI
                     QRLEWEALNAKIGRWIRAAKVCIRVLFSSEKKLCKQIFEDLGTTSADDVCFMETVKSP
                     ATQLFNFAEAISISRRSPEKLFKILDLHDSLLDLLPDIDDVFDSKPAESIRIQAPEIL
                     SRLAEAARGMLTEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKLTLGEVIV
                     SKPATGSRHCDSTAPEMDFSDHEGQSPLALHLIWIITILQFNLEGKSKHYKDNSLAHL
                     FIMNNVHYIVQKIKGPMELRDMIGDQYLRTLTRTFRQAATNHQRATWIGVLHCLRDQG
                     LHSTGSFSSGVSKSALRERFKSFNVIFDEVHRTQALWLVPDEQLREELKISILEKLVP
                     AYRSFLGRYGNHISDNYIKYTVEDLENAVLDLFEGYAVSQHSRRRSQ"
     misc_feature    694..1791
                     /gene="LOC139903938"
                     /note="Exo70 exocyst complex subunit; Region: Exo70;
                     pfam03081"
                     /db_xref="CDD:460798"
ORIGIN      
        1 atggaaccac cggggacaga cagctcagct gctgaacaga tcatactccg gtgggactca
       61 atggcatcag aagatgctag atatcaaatg atttttgaag gtgatcgtga cgaaataaac
      121 cgttacttgc aagctgtaga tcaactccaa cgatctatgg actcaaatac attatccgaa
      181 aatcagtcaa cgaaagtcaa caacgcaatc cagattgcta tggctcgttt agaagacgag
      241 tttcgtaaca ttcttattac gaactcgact cctattgaga ccgagccact tattgactcg
      301 gtctcgttaa ctcctagaac cactcctaga actagcagtt gtcggagtga ttcaccagaa
      361 aatgaacata atagcgaaaa acgaactgaa tcgatttcta aaatcacttc tgcatcattt
      421 aatgaacgta atgaacgtag cacgacgttc gcgagctgta gatctatgaa cagcattcgc
      481 gaacaagatc tgataccagc tgaaagcata tcagatctgc gcgagatcgc agagcgtatg
      541 attgctgctg gttacttcag agagtgtgtt caggtgtacg gaagtgtacg gaaatctgtt
      601 gtagacggaa gctttaaaaa gctcggagtc gaaaaattaa gcataggtga cattcagcgc
      661 cttgaatggg aggcgctgaa cgcaaaaatc ggacgttgga ttcgagctgc gaaagtttgt
      721 atcagagttt tgttttctag cgaaaagaag ctttgtaagc aaattttcga agatttaggg
      781 acgacgtcag cggatgacgt gtgtttcatg gaaaccgtta agtctccggc gactcagctg
      841 tttaattttg cggaagcgat aagtataagc aggaggtcac cggagaagct gtttaaaatt
      901 ctggatttac atgactcgtt actagattta ttgccggata ttgatgacgt gtttgattcg
      961 aaaccggctg aatcgattag gattcaagcg ccggagatac tttcacggct agcggaagcg
     1021 gctagaggaa tgttaacgga gtttgaaaac gcagtccttc gagaaccttc taaagttcct
     1081 gttcctggag gtacgattca tcctttaact aggtatgtaa tgaattacat aagtttgatt
     1141 tcagattaca agttaacatt aggagaagta atcgtttcga aaccggcaac cggatctaga
     1201 cattgtgatt ccaccgcacc ggagatggat tttagtgatc atgaagggca atcgccgtta
     1261 gcgttacatt taatttggat aattacgata ttgcaattta atctagaagg aaaatcgaaa
     1321 cattataagg ataattcgtt agctcatttg ttcattatga ataatgttca ttacattgta
     1381 caaaagatca aagggccaat ggagttaagg gatatgattg gtgaccagta tttaagaacc
     1441 ctaaccagga cctttaggca agctgccacg aatcaccaac gagcaacgtg gattggtgta
     1501 ttacattgtt tgcgagatca agggttacac tcgactggaa gtttctcgtc tggtgtttca
     1561 aagagtgcgt taagagagcg gttcaaatcg tttaatgtga tatttgatga agtgcatagg
     1621 acacaagcgt tatggttagt ccccgatgag caacttcgcg aggagttgaa aatatcgata
     1681 ttggagaaac ttgttccagc ttatcgttcg tttcttggga gatacgggaa tcatatatcg
     1741 gataattata tcaagtacac tgtggaagat cttgaaaatg cagttttgga tttgtttgaa
     1801 gggtatgcag tttctcagca ttctaggaga agatcacaat gagagaaatt aaaaaaccag
     1861 aatatggtaa tggtaggata caattttttg attattttat ttggtataaa aagaggaaac
     1921 ctgatagtct ct
//
LOCUS       XM_071885866            4885 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903939), transcript variant X1, mRNA.
ACCESSION   XM_071885866
VERSION     XM_071885866.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4885
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4885
                     /gene="LOC139903939"
                     /note="uncharacterized LOC139903939; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903939"
     CDS             128..4144
                     /gene="LOC139903939"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071741967.1"
                     /db_xref="GeneID:139903939"
                     /translation="MESTITKFGHLQIPIEDVLKATDNFDDKNVIGRGELGIVYKGRL
                     LHSGKRVKIAARRLNNKHKHNIEFLREISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKGSLVRYLSNPNLTWNQRLRISVGIARALSYMHKEDGRSYSVIHRNINSSTILLNN
                     KFGAKLSGFEYSINHPVNRMDDVFLSEAIGTRGYVDPEIGKTGGVTHKSDIYSFGVVL
                     LELLCGRKAFLPNEDDKFLVSLVKLKYEENSMVGNLILPCLSAQICHRAQSIFLPAAV
                     FCVKDERVQRPHMKYIVGELEKAFEFQRPYESLNLQRSSLNQLTSQFSHFKFRLDDIT
                     LATNNFSPAYRIMRNDWYDIYVAGFEHCDEENCVCVEEKNESERPKRRYIYLKRMRPR
                     EDKLEEEELFRTDIEMLTTCNHPNIVTPLGICNEDPEKILIVEGSSNGFLAEYLKNKR
                     DKYVLTWEKRLKICLDVANGLKYLHHEMEDQKTVINRYFSTNSIALDESFRAEIVDLV
                     LSVFVPPNQDVHGFGLVVGSPLYSDPEYLRHGKLKRESDVYSLGVAFFEILCGRVAND
                     QMYTTESEVGLAYTARSCFLNGTLMEIIDPIIKEESDDNKDSIDTFVKIAYRCLAETQ
                     DQRPTMKDIIKELEKALSFQKPEQCHKSDQIVDVDGYDKLLDPKSTHEIPEHSNYAVQ
                     IPEWKNLKENISKNLKIRLSDILSATNSFSEACIVWHEGHYRVYKAELEHFNQEIIGS
                     VEEKYKSEPPKRRTTALIKRLFVRINQQKQRRESLFLHEIEKLSICKHPNIVTLVGFC
                     DEDSEMILVFENTIKLFLAEHFLDFQKQPHLTWSERLRICLDVAYGMKYLHYEMEEQK
                     VIIHRNIRSRTIALDENLRARIFDFGRSIFLPPYLDDDTLHLNEIIGSHGYIDPEYEK
                     TGKLKRESDIYSFGVLLCEVFCGKLPDSANLKESDERFAYEVRRCIREGAVMNMLDPL
                     IKEEISSDGFSLNKGPNKDSLDAFLKIVDACLVETQDKRPTIKVVVEELKKALMFQEN
                     NKDTLRISYEDIKLATENFDDKNCVGEGGFGKVYKGKLPQSDNTIVAKQLDTRGGQGD
                     KQFQNELQILFKYKHGNIISIVGYCDEKDAKIIVYEYAPRGSLDKYLGEARLNWMKRL
                     NICIGVATALDFLHRGIGKQATVIHRDIKTANILLTNDWNAKLADFGLSLISAINKET
                     DYAIDRACGTPGYVDPLYLKSGFLTKESDIYSFGVVLFEILCGRSTFETHKREGIYLP
                     SFINRCFENEKRDDVVFEKIKAQIMPKALTTFRKIAYRCLREDREKRPKAKEVVKQLK
                     KALRFQMLRDDLASTTSS"
     misc_feature    218..1021
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(218..229,236..238,242..244,287..289,293..295,
                     377..379,425..436,575..577,587..592,596..598,626..631)
                     /gene="LOC139903939"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1286..2044
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2387..3196
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    3290..4090
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3290..3301,3308..3310,3314..3316,3356..3358,
                     3359..3361,3446..3448,3494..3505,3644..3646,3656..3661,
                     3665..3667,3695..3700)
                     /gene="LOC139903939"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 tgtctgtggg gggatcaaaa taggaaatat acaatcaact tttttccgtt tataaaggag
       61 taacttacat tccttttatt tgtactctat tcattcaata accagatata tagatctaaa
      121 aggaagtatg gaatctacaa tcacgaagtt tggtcactta caaatcccaa ttgaagacgt
      181 actaaaagcc accgacaact tcgatgataa gaatgtcatc gggcggggtg agttaggaat
      241 agtttataaa ggacggctct tgcattctgg gaaaagggtg aaaattgccg ctcggagatt
      301 aaacaataag cataagcaca atatcgagtt tttgagagag atttctgcgc tctctagtct
      361 caagcatgaa aatattgtct cgattattgg gttttgtgac gaaaaaggag aaaaggtcat
      421 cataaacaag catgaggcta aaggaagcct cgtgagatat ctaagcaacc caaaccttac
      481 atggaatcaa aggctgagga taagtgttgg cattgcacgt gctttaagtt acatgcataa
      541 agaagatgga cgtagttact ctgtcataca ccgtaatatc aacagctcta cgatattatt
      601 aaacaataag tttggggcca agttatctgg atttgaatat tccatcaacc atcctgttaa
      661 tcgaatggat gatgttttcc tttcagaagc tatcggaaca agagggtatg tggaccccga
      721 aattggaaag accggtggtg tgacccacaa gtccgacatt tactcatttg gtgttgtttt
      781 attggaatta ttatgtggga ggaaagcgtt tttaccaaat gaggatgata agtttctagt
      841 ttcactggtc aaactcaagt atgaagaaaa tagtatggtg ggtaatttaa tcctaccttg
      901 tctatccgct caaatatgtc atagagcaca atcaattttc ttaccagcag cagtattttg
      961 cgtaaaggat gagcgagtac aacgtccaca tatgaagtat attgttggcg aacttgagaa
     1021 ggcattcgaa tttcagcggc catatgaaag tttgaatttg cagagatcca gcttgaatca
     1081 gttgacatct caattcagtc acttcaagtt taggctcgat gatataactc tggccaccaa
     1141 caacttttct cccgcatacc gcatcatgag aaacgactgg tatgacatat acgtagcagg
     1201 atttgaacat tgtgatgaag aaaattgtgt ctgtgtagaa gaaaagaatg aaagtgaacg
     1261 tcccaagaga cgctatatct atttaaaacg catgcgccct cgagaggaca aactagaaga
     1321 agaagaatta ttccgtacag acatcgaaat gcttacaact tgtaaccatc ccaacatagt
     1381 cactccactt ggaatttgta atgaagatcc ggaaaagatc cttatcgtcg agggatcttc
     1441 taatggattc cttgctgaat atttgaaaaa caaaagagat aaatatgttc ttacttggga
     1501 aaaacgtttg aaaatatgtc ttgatgttgc aaatggattg aagtatctac accatgagat
     1561 ggaagaccaa aagacggtaa taaaccgtta tttctctaca aactcaattg cgttagatga
     1621 gagtttcagg gcagagattg ttgacttggt attatcggtc ttcgttcctc ctaaccaaga
     1681 tgttcatggt ttcggtttag ttgttggctc tccattgtac agtgatcccg aatatttacg
     1741 tcatggtaag ttaaaaagag aatcagatgt atattcttta ggagtagctt ttttcgaaat
     1801 tttgtgtgga agggtagcca acgatcaaat gtacacaacc gagagtgaag ttggactggc
     1861 atatacggca cgcagttgct tccttaacgg aacactaatg gaaattatag atcctataat
     1921 taaggaagaa agtgatgaca acaaagattc tatagacaca tttgtgaaaa ttgcatatag
     1981 gtgcttggcg gaaactcaag accaacgtcc tacgatgaaa gacatcatca aagagcttga
     2041 gaaagcatta tcgtttcaaa agccagaaca atgtcataag tccgaccaga ttgtagatgt
     2101 cgatggatat gataaattat tagacccgaa atcgacacat gaaattcctg aacattcaaa
     2161 ttatgcagtt caaattcctg aatggaagaa tctgaaggaa aatatctcaa agaaccttaa
     2221 aattcgactc agtgatatat tatcggccac aaatagcttt tctgaggcat gcatcgtttg
     2281 gcatgaaggt cattatcggg tatacaaagc agaacttgag catttcaatc aagaaattat
     2341 tggctcggta gaagagaagt ataaaagcga accacccaag agacgcacca ctgcattaat
     2401 aaaacgcctc ttcgttcgaa taaaccaaca aaaacaacga agagaaagtt tattcttaca
     2461 cgaaattgaa aagcttagca tttgtaagca tcctaacata gtcactctag taggattttg
     2521 tgatgaagat tctgagatga tccttgtttt tgagaacact attaaattat tccttgctga
     2581 acattttctg gacttccaga aacaacctca tcttacatgg tctgaacgtt tgagaatatg
     2641 ccttgatgtt gcatatggaa tgaagtacct acactacgag atggaagaac aaaaggtgat
     2701 aatacatcgt aatataagaa gccgcacaat tgctttagac gaaaatttga gggcacgaat
     2761 attcgacttt ggtaggtcta tattccttcc tccttatctc gacgacgata ctctccatct
     2821 caatgagatt attggcagtc atggttacat tgatccagaa tatgaaaaga cgggaaagtt
     2881 aaaaagagaa tcagatatat atagtttcgg agtactattg tgtgaagttt tttgtggtaa
     2941 gttacctgat tcagcaaatt taaaggagag tgatgaaagg tttgcatatg aggtacgaag
     3001 atgcatccgt gaaggagccg tgatgaatat gttagatcct ctaattaagg aagagattag
     3061 tagtgacggc tttagcctga ataaaggacc caacaaagat tctttggacg catttttgaa
     3121 aatagtagat gcgtgtttgg tagagactca agacaaacgt ccaacaataa aagttgttgt
     3181 cgaggagctc aagaaagcct taatgtttca agaaaacaac aaagatactc tccggatttc
     3241 atatgaggac ataaaattag ccacagaaaa cttcgatgat aaaaattgtg ttggcgaagg
     3301 agggtttggg aaagtttata aaggaaaact tccacaaagt gataacacaa ttgttgcaaa
     3361 acaattggat acaaggggtg gtcaagggga taaacagttt cagaatgagc tccaaattct
     3421 ttttaagtac aagcacggta atatcattag tattgtaggc tattgtgatg aaaaagatgc
     3481 aaaaattatt gtttatgagt atgcgcctag agggagtctt gataaatatt tgggtgaagc
     3541 tcgtcttaat tggatgaaaa gacttaatat atgtataggc gttgcaactg cattagattt
     3601 tcttcacaga ggaattggaa aacaagcgac ggtgatacat agggacatca aaaccgctaa
     3661 cattctacta actaatgact ggaatgcaaa acttgcagat tttgggcttt ccttgataag
     3721 tgcaataaat aaggaaacag actacgccat cgaccgtgca tgcggcacac caggctacgt
     3781 ggatccactt tacttaaaat cgggtttctt aaccaaagaa tccgatatat attcgtttgg
     3841 tgtggtttta tttgagatct tgtgtggacg atcaacattt gagacccaca aacgggaagg
     3901 tatatatcta ccaagtttca ttaaccgttg ctttgaaaat gaaaaacgtg atgacgtggt
     3961 gtttgagaaa ataaaagcac agatcatgcc gaaagcattg actacattcc gaaagattgc
     4021 ctaccggtgc ttacgtgaag atagagaaaa acgaccaaaa gcaaaagaag ttgtaaaaca
     4081 acttaagaag gcattgagat ttcaaatgct gagagatgat ttagcttcta ccacaagtag
     4141 ctagtatcaa ccgcaagatt ggaagtcaaa tgtttgtttt caagcttttt acagaatcta
     4201 gtggtttgcg ttgtcaggta aatggattgt ggttattgtg tgaaaaaact caacttaaat
     4261 tatgagttta aaaggctctt cgttgatata atttcgtcca ttctttattt gtgtaactgt
     4321 atatgatatg atcatatttt tgtatatcca gtcctataaa taagtaatgt tgcatatatc
     4381 gggagtactc aactagtact cggcaaaaaa ggtctcccga ttactcggtc caattggatt
     4441 acttgttcaa acatagtcaa actcggtcaa aactcgggga ttactctgtc aaacttggtc
     4501 aatagtcgtg attacttaaa aaatcagtca aaactaggtc aaaatcagtt aaagtcaaac
     4561 ttaacttggt caatatccga gtactccccg agtatactcc ctaaaaattc cgaccgagta
     4621 ctccccgagt attgatgttt gcaaccttgt aaataaatgg ttgctcccta gaggtcttaa
     4681 ggattttgct gctgatattt ggcctgatac ttcttatttt gatggagtct tatctgcgct
     4741 taaatatgtt taaggtggtt tataaattga tacttatagt tttcatttaa cattatatat
     4801 gtaatatgta tatatgtatg tatgtattcc ggttttgaaa gtgattgaat aatcacagtt
     4861 agagcgcctt tatgtaaaaa tctct
//
LOCUS       XM_071885867            5044 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903939), transcript variant X2, mRNA.
ACCESSION   XM_071885867
VERSION     XM_071885867.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5044
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5044
                     /gene="LOC139903939"
                     /note="uncharacterized LOC139903939; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903939"
     CDS             287..4303
                     /gene="LOC139903939"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071741968.1"
                     /db_xref="GeneID:139903939"
                     /translation="MESTITKFGHLQIPIEDVLKATDNFDDKNVIGRGELGIVYKGRL
                     LHSGKRVKIAARRLNNKHKHNIEFLREISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKGSLVRYLSNPNLTWNQRLRISVGIARALSYMHKEDGRSYSVIHRNINSSTILLNN
                     KFGAKLSGFEYSINHPVNRMDDVFLSEAIGTRGYVDPEIGKTGGVTHKSDIYSFGVVL
                     LELLCGRKAFLPNEDDKFLVSLVKLKYEENSMVGNLILPCLSAQICHRAQSIFLPAAV
                     FCVKDERVQRPHMKYIVGELEKAFEFQRPYESLNLQRSSLNQLTSQFSHFKFRLDDIT
                     LATNNFSPAYRIMRNDWYDIYVAGFEHCDEENCVCVEEKNESERPKRRYIYLKRMRPR
                     EDKLEEEELFRTDIEMLTTCNHPNIVTPLGICNEDPEKILIVEGSSNGFLAEYLKNKR
                     DKYVLTWEKRLKICLDVANGLKYLHHEMEDQKTVINRYFSTNSIALDESFRAEIVDLV
                     LSVFVPPNQDVHGFGLVVGSPLYSDPEYLRHGKLKRESDVYSLGVAFFEILCGRVAND
                     QMYTTESEVGLAYTARSCFLNGTLMEIIDPIIKEESDDNKDSIDTFVKIAYRCLAETQ
                     DQRPTMKDIIKELEKALSFQKPEQCHKSDQIVDVDGYDKLLDPKSTHEIPEHSNYAVQ
                     IPEWKNLKENISKNLKIRLSDILSATNSFSEACIVWHEGHYRVYKAELEHFNQEIIGS
                     VEEKYKSEPPKRRTTALIKRLFVRINQQKQRRESLFLHEIEKLSICKHPNIVTLVGFC
                     DEDSEMILVFENTIKLFLAEHFLDFQKQPHLTWSERLRICLDVAYGMKYLHYEMEEQK
                     VIIHRNIRSRTIALDENLRARIFDFGRSIFLPPYLDDDTLHLNEIIGSHGYIDPEYEK
                     TGKLKRESDIYSFGVLLCEVFCGKLPDSANLKESDERFAYEVRRCIREGAVMNMLDPL
                     IKEEISSDGFSLNKGPNKDSLDAFLKIVDACLVETQDKRPTIKVVVEELKKALMFQEN
                     NKDTLRISYEDIKLATENFDDKNCVGEGGFGKVYKGKLPQSDNTIVAKQLDTRGGQGD
                     KQFQNELQILFKYKHGNIISIVGYCDEKDAKIIVYEYAPRGSLDKYLGEARLNWMKRL
                     NICIGVATALDFLHRGIGKQATVIHRDIKTANILLTNDWNAKLADFGLSLISAINKET
                     DYAIDRACGTPGYVDPLYLKSGFLTKESDIYSFGVVLFEILCGRSTFETHKREGIYLP
                     SFINRCFENEKRDDVVFEKIKAQIMPKALTTFRKIAYRCLREDREKRPKAKEVVKQLK
                     KALRFQMLRDDLASTTSS"
     misc_feature    377..1180
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(377..388,395..397,401..403,446..448,452..454,
                     536..538,584..595,734..736,746..751,755..757,785..790)
                     /gene="LOC139903939"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1445..2203
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2546..3355
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    3449..4249
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3449..3460,3467..3469,3473..3475,3515..3517,
                     3518..3520,3605..3607,3653..3664,3803..3805,3815..3820,
                     3824..3826,3854..3859)
                     /gene="LOC139903939"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 gttttttttt gctttgtcat agcccaagca gtcatcgaat tctcaataaa gcaggggact
       61 tagattcaac tattggtaac gcttaaaatt gacttgattg ggctcttatt agagggggca
      121 tcaatgtgcg caattcaccc tgttacaagt ctcgtcgctc gagggctcat caccaagggt
      181 tttactcgct agtggaaccc aatatgattg ttgctatgga ggtttcctcc gcgaatctaa
      241 aacaaagata caactttcac tagtatatat agatctaaaa ggaagtatgg aatctacaat
      301 cacgaagttt ggtcacttac aaatcccaat tgaagacgta ctaaaagcca ccgacaactt
      361 cgatgataag aatgtcatcg ggcggggtga gttaggaata gtttataaag gacggctctt
      421 gcattctggg aaaagggtga aaattgccgc tcggagatta aacaataagc ataagcacaa
      481 tatcgagttt ttgagagaga tttctgcgct ctctagtctc aagcatgaaa atattgtctc
      541 gattattggg ttttgtgacg aaaaaggaga aaaggtcatc ataaacaagc atgaggctaa
      601 aggaagcctc gtgagatatc taagcaaccc aaaccttaca tggaatcaaa ggctgaggat
      661 aagtgttggc attgcacgtg ctttaagtta catgcataaa gaagatggac gtagttactc
      721 tgtcatacac cgtaatatca acagctctac gatattatta aacaataagt ttggggccaa
      781 gttatctgga tttgaatatt ccatcaacca tcctgttaat cgaatggatg atgttttcct
      841 ttcagaagct atcggaacaa gagggtatgt ggaccccgaa attggaaaga ccggtggtgt
      901 gacccacaag tccgacattt actcatttgg tgttgtttta ttggaattat tatgtgggag
      961 gaaagcgttt ttaccaaatg aggatgataa gtttctagtt tcactggtca aactcaagta
     1021 tgaagaaaat agtatggtgg gtaatttaat cctaccttgt ctatccgctc aaatatgtca
     1081 tagagcacaa tcaattttct taccagcagc agtattttgc gtaaaggatg agcgagtaca
     1141 acgtccacat atgaagtata ttgttggcga acttgagaag gcattcgaat ttcagcggcc
     1201 atatgaaagt ttgaatttgc agagatccag cttgaatcag ttgacatctc aattcagtca
     1261 cttcaagttt aggctcgatg atataactct ggccaccaac aacttttctc ccgcataccg
     1321 catcatgaga aacgactggt atgacatata cgtagcagga tttgaacatt gtgatgaaga
     1381 aaattgtgtc tgtgtagaag aaaagaatga aagtgaacgt cccaagagac gctatatcta
     1441 tttaaaacgc atgcgccctc gagaggacaa actagaagaa gaagaattat tccgtacaga
     1501 catcgaaatg cttacaactt gtaaccatcc caacatagtc actccacttg gaatttgtaa
     1561 tgaagatccg gaaaagatcc ttatcgtcga gggatcttct aatggattcc ttgctgaata
     1621 tttgaaaaac aaaagagata aatatgttct tacttgggaa aaacgtttga aaatatgtct
     1681 tgatgttgca aatggattga agtatctaca ccatgagatg gaagaccaaa agacggtaat
     1741 aaaccgttat ttctctacaa actcaattgc gttagatgag agtttcaggg cagagattgt
     1801 tgacttggta ttatcggtct tcgttcctcc taaccaagat gttcatggtt tcggtttagt
     1861 tgttggctct ccattgtaca gtgatcccga atatttacgt catggtaagt taaaaagaga
     1921 atcagatgta tattctttag gagtagcttt tttcgaaatt ttgtgtggaa gggtagccaa
     1981 cgatcaaatg tacacaaccg agagtgaagt tggactggca tatacggcac gcagttgctt
     2041 ccttaacgga acactaatgg aaattataga tcctataatt aaggaagaaa gtgatgacaa
     2101 caaagattct atagacacat ttgtgaaaat tgcatatagg tgcttggcgg aaactcaaga
     2161 ccaacgtcct acgatgaaag acatcatcaa agagcttgag aaagcattat cgtttcaaaa
     2221 gccagaacaa tgtcataagt ccgaccagat tgtagatgtc gatggatatg ataaattatt
     2281 agacccgaaa tcgacacatg aaattcctga acattcaaat tatgcagttc aaattcctga
     2341 atggaagaat ctgaaggaaa atatctcaaa gaaccttaaa attcgactca gtgatatatt
     2401 atcggccaca aatagctttt ctgaggcatg catcgtttgg catgaaggtc attatcgggt
     2461 atacaaagca gaacttgagc atttcaatca agaaattatt ggctcggtag aagagaagta
     2521 taaaagcgaa ccacccaaga gacgcaccac tgcattaata aaacgcctct tcgttcgaat
     2581 aaaccaacaa aaacaacgaa gagaaagttt attcttacac gaaattgaaa agcttagcat
     2641 ttgtaagcat cctaacatag tcactctagt aggattttgt gatgaagatt ctgagatgat
     2701 ccttgttttt gagaacacta ttaaattatt ccttgctgaa cattttctgg acttccagaa
     2761 acaacctcat cttacatggt ctgaacgttt gagaatatgc cttgatgttg catatggaat
     2821 gaagtaccta cactacgaga tggaagaaca aaaggtgata atacatcgta atataagaag
     2881 ccgcacaatt gctttagacg aaaatttgag ggcacgaata ttcgactttg gtaggtctat
     2941 attccttcct ccttatctcg acgacgatac tctccatctc aatgagatta ttggcagtca
     3001 tggttacatt gatccagaat atgaaaagac gggaaagtta aaaagagaat cagatatata
     3061 tagtttcgga gtactattgt gtgaagtttt ttgtggtaag ttacctgatt cagcaaattt
     3121 aaaggagagt gatgaaaggt ttgcatatga ggtacgaaga tgcatccgtg aaggagccgt
     3181 gatgaatatg ttagatcctc taattaagga agagattagt agtgacggct ttagcctgaa
     3241 taaaggaccc aacaaagatt ctttggacgc atttttgaaa atagtagatg cgtgtttggt
     3301 agagactcaa gacaaacgtc caacaataaa agttgttgtc gaggagctca agaaagcctt
     3361 aatgtttcaa gaaaacaaca aagatactct ccggatttca tatgaggaca taaaattagc
     3421 cacagaaaac ttcgatgata aaaattgtgt tggcgaagga gggtttggga aagtttataa
     3481 aggaaaactt ccacaaagtg ataacacaat tgttgcaaaa caattggata caaggggtgg
     3541 tcaaggggat aaacagtttc agaatgagct ccaaattctt tttaagtaca agcacggtaa
     3601 tatcattagt attgtaggct attgtgatga aaaagatgca aaaattattg tttatgagta
     3661 tgcgcctaga gggagtcttg ataaatattt gggtgaagct cgtcttaatt ggatgaaaag
     3721 acttaatata tgtataggcg ttgcaactgc attagatttt cttcacagag gaattggaaa
     3781 acaagcgacg gtgatacata gggacatcaa aaccgctaac attctactaa ctaatgactg
     3841 gaatgcaaaa cttgcagatt ttgggctttc cttgataagt gcaataaata aggaaacaga
     3901 ctacgccatc gaccgtgcat gcggcacacc aggctacgtg gatccacttt acttaaaatc
     3961 gggtttctta accaaagaat ccgatatata ttcgtttggt gtggttttat ttgagatctt
     4021 gtgtggacga tcaacatttg agacccacaa acgggaaggt atatatctac caagtttcat
     4081 taaccgttgc tttgaaaatg aaaaacgtga tgacgtggtg tttgagaaaa taaaagcaca
     4141 gatcatgccg aaagcattga ctacattccg aaagattgcc taccggtgct tacgtgaaga
     4201 tagagaaaaa cgaccaaaag caaaagaagt tgtaaaacaa cttaagaagg cattgagatt
     4261 tcaaatgctg agagatgatt tagcttctac cacaagtagc tagtatcaac cgcaagattg
     4321 gaagtcaaat gtttgttttc aagcttttta cagaatctag tggtttgcgt tgtcaggtaa
     4381 atggattgtg gttattgtgt gaaaaaactc aacttaaatt atgagtttaa aaggctcttc
     4441 gttgatataa tttcgtccat tctttatttg tgtaactgta tatgatatga tcatattttt
     4501 gtatatccag tcctataaat aagtaatgtt gcatatatcg ggagtactca actagtactc
     4561 ggcaaaaaag gtctcccgat tactcggtcc aattggatta cttgttcaaa catagtcaaa
     4621 ctcggtcaaa actcggggat tactctgtca aacttggtca atagtcgtga ttacttaaaa
     4681 aatcagtcaa aactaggtca aaatcagtta aagtcaaact taacttggtc aatatccgag
     4741 tactccccga gtatactccc taaaaattcc gaccgagtac tccccgagta ttgatgtttg
     4801 caaccttgta aataaatggt tgctccctag aggtcttaag gattttgctg ctgatatttg
     4861 gcctgatact tcttattttg atggagtctt atctgcgctt aaatatgttt aaggtggttt
     4921 ataaattgat acttatagtt ttcatttaac attatatatg taatatgtat atatgtatgt
     4981 atgtattccg gttttgaaag tgattgaata atcacagtta gagcgccttt atgtaaaaat
     5041 ctct
//
LOCUS       XM_071885868            4883 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903939), transcript variant X3, mRNA.
ACCESSION   XM_071885868
VERSION     XM_071885868.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4883
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4883
                     /gene="LOC139903939"
                     /note="uncharacterized LOC139903939; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903939"
     CDS             129..4142
                     /gene="LOC139903939"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071741969.1"
                     /db_xref="GeneID:139903939"
                     /translation="MESTITKFGHLQIPIEDVLKATDNFDDKNVIGRGELGIVYKGRL
                     LHSGKRVKIAARRLNNKHKHNIEFLREISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKGSLVRYLSNPNLTWNQRLRISVGIARALSYMHKEDGRSYSVIHRNINSSTILLNN
                     KFGAKLSGFEYSINHPVNRMDDVFLSEAIGTRGYVDPEIGKTGGVTHKSDIYSFGVVL
                     LELLCGRKAFLPNEDDKFLVSLVKLKYEENSMVGNLILPCLSAQICHRAQSIFLPAAV
                     FCVKDERVQRPHMKYIVGELEKAFEFQRPYESLNLQRSSLNQLTSQFSHFKFRLDDIT
                     LATNNFSPAYRIMRNDWYDIYVAGFEHCDEENCVCVEEKNESERPKRRYIYLKRMRPR
                     EDKLEEEELFRTDIEMLTTCNHPNIVTPLGICNEDPEKILIVEGSSNGFLAEYLKNKR
                     DKYVLTWEKRLKICLDVANGLKYLHHEMEDQKTVINRYFSTNSIALDESFRAEIVDLV
                     LSVFVPPNQDVHGFGLVVGSPLYSDPEYLRHGKLKRESDVYSLGVAFFEILCGRVAND
                     QMYTTESEVGLAYTARSCFLNGTLMEIIDPIIKEESDDNKDSIDTFVKIAYRCLAETQ
                     DQRPTMKDIIKELEKALSFQPEQCHKSDQIVDVDGYDKLLDPKSTHEIPEHSNYAVQI
                     PEWKNLKENISKNLKIRLSDILSATNSFSEACIVWHEGHYRVYKAELEHFNQEIIGSV
                     EEKYKSEPPKRRTTALIKRLFVRINQQKQRRESLFLHEIEKLSICKHPNIVTLVGFCD
                     EDSEMILVFENTIKLFLAEHFLDFQKQPHLTWSERLRICLDVAYGMKYLHYEMEEQKV
                     IIHRNIRSRTIALDENLRARIFDFGRSIFLPPYLDDDTLHLNEIIGSHGYIDPEYEKT
                     GKLKRESDIYSFGVLLCEVFCGKLPDSANLKESDERFAYEVRRCIREGAVMNMLDPLI
                     KEEISSDGFSLNKGPNKDSLDAFLKIVDACLVETQDKRPTIKVVVEELKKALMFQENN
                     KDTLRISYEDIKLATENFDDKNCVGEGGFGKVYKGKLPQSDNTIVAKQLDTRGGQGDK
                     QFQNELQILFKYKHGNIISIVGYCDEKDAKIIVYEYAPRGSLDKYLGEARLNWMKRLN
                     ICIGVATALDFLHRGIGKQATVIHRDIKTANILLTNDWNAKLADFGLSLISAINKETD
                     YAIDRACGTPGYVDPLYLKSGFLTKESDIYSFGVVLFEILCGRSTFETHKREGIYLPS
                     FINRCFENEKRDDVVFEKIKAQIMPKALTTFRKIAYRCLREDREKRPKAKEVVKQLKK
                     ALRFQMLRDDLASTTSS"
     misc_feature    219..1022
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(219..230,237..239,243..245,288..290,294..296,
                     378..380,426..437,576..578,588..593,597..599,627..632)
                     /gene="LOC139903939"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1287..2045
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2385..3194
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    3288..4088
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3288..3299,3306..3308,3312..3314,3354..3356,
                     3357..3359,3444..3446,3492..3503,3642..3644,3654..3659,
                     3663..3665,3693..3698)
                     /gene="LOC139903939"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 ttgtctgtgg ggggatcaaa ataggaaata tacaatcaac ttttttccgt ttataaagga
       61 gtaacttaca ttccttttat ttgtactcta ttcattcaat aaccagatat atagatctaa
      121 aaggaagtat ggaatctaca atcacgaagt ttggtcactt acaaatccca attgaagacg
      181 tactaaaagc caccgacaac ttcgatgata agaatgtcat cgggcggggt gagttaggaa
      241 tagtttataa aggacggctc ttgcattctg ggaaaagggt gaaaattgcc gctcggagat
      301 taaacaataa gcataagcac aatatcgagt ttttgagaga gatttctgcg ctctctagtc
      361 tcaagcatga aaatattgtc tcgattattg ggttttgtga cgaaaaagga gaaaaggtca
      421 tcataaacaa gcatgaggct aaaggaagcc tcgtgagata tctaagcaac ccaaacctta
      481 catggaatca aaggctgagg ataagtgttg gcattgcacg tgctttaagt tacatgcata
      541 aagaagatgg acgtagttac tctgtcatac accgtaatat caacagctct acgatattat
      601 taaacaataa gtttggggcc aagttatctg gatttgaata ttccatcaac catcctgtta
      661 atcgaatgga tgatgttttc ctttcagaag ctatcggaac aagagggtat gtggaccccg
      721 aaattggaaa gaccggtggt gtgacccaca agtccgacat ttactcattt ggtgttgttt
      781 tattggaatt attatgtggg aggaaagcgt ttttaccaaa tgaggatgat aagtttctag
      841 tttcactggt caaactcaag tatgaagaaa atagtatggt gggtaattta atcctacctt
      901 gtctatccgc tcaaatatgt catagagcac aatcaatttt cttaccagca gcagtatttt
      961 gcgtaaagga tgagcgagta caacgtccac atatgaagta tattgttggc gaacttgaga
     1021 aggcattcga atttcagcgg ccatatgaaa gtttgaattt gcagagatcc agcttgaatc
     1081 agttgacatc tcaattcagt cacttcaagt ttaggctcga tgatataact ctggccacca
     1141 acaacttttc tcccgcatac cgcatcatga gaaacgactg gtatgacata tacgtagcag
     1201 gatttgaaca ttgtgatgaa gaaaattgtg tctgtgtaga agaaaagaat gaaagtgaac
     1261 gtcccaagag acgctatatc tatttaaaac gcatgcgccc tcgagaggac aaactagaag
     1321 aagaagaatt attccgtaca gacatcgaaa tgcttacaac ttgtaaccat cccaacatag
     1381 tcactccact tggaatttgt aatgaagatc cggaaaagat ccttatcgtc gagggatctt
     1441 ctaatggatt ccttgctgaa tatttgaaaa acaaaagaga taaatatgtt cttacttggg
     1501 aaaaacgttt gaaaatatgt cttgatgttg caaatggatt gaagtatcta caccatgaga
     1561 tggaagacca aaagacggta ataaaccgtt atttctctac aaactcaatt gcgttagatg
     1621 agagtttcag ggcagagatt gttgacttgg tattatcggt cttcgttcct cctaaccaag
     1681 atgttcatgg tttcggttta gttgttggct ctccattgta cagtgatccc gaatatttac
     1741 gtcatggtaa gttaaaaaga gaatcagatg tatattcttt aggagtagct tttttcgaaa
     1801 ttttgtgtgg aagggtagcc aacgatcaaa tgtacacaac cgagagtgaa gttggactgg
     1861 catatacggc acgcagttgc ttccttaacg gaacactaat ggaaattata gatcctataa
     1921 ttaaggaaga aagtgatgac aacaaagatt ctatagacac atttgtgaaa attgcatata
     1981 ggtgcttggc ggaaactcaa gaccaacgtc ctacgatgaa agacatcatc aaagagcttg
     2041 agaaagcatt atcgtttcaa ccagaacaat gtcataagtc cgaccagatt gtagatgtcg
     2101 atggatatga taaattatta gacccgaaat cgacacatga aattcctgaa cattcaaatt
     2161 atgcagttca aattcctgaa tggaagaatc tgaaggaaaa tatctcaaag aaccttaaaa
     2221 ttcgactcag tgatatatta tcggccacaa atagcttttc tgaggcatgc atcgtttggc
     2281 atgaaggtca ttatcgggta tacaaagcag aacttgagca tttcaatcaa gaaattattg
     2341 gctcggtaga agagaagtat aaaagcgaac cacccaagag acgcaccact gcattaataa
     2401 aacgcctctt cgttcgaata aaccaacaaa aacaacgaag agaaagttta ttcttacacg
     2461 aaattgaaaa gcttagcatt tgtaagcatc ctaacatagt cactctagta ggattttgtg
     2521 atgaagattc tgagatgatc cttgtttttg agaacactat taaattattc cttgctgaac
     2581 attttctgga cttccagaaa caacctcatc ttacatggtc tgaacgtttg agaatatgcc
     2641 ttgatgttgc atatggaatg aagtacctac actacgagat ggaagaacaa aaggtgataa
     2701 tacatcgtaa tataagaagc cgcacaattg ctttagacga aaatttgagg gcacgaatat
     2761 tcgactttgg taggtctata ttccttcctc cttatctcga cgacgatact ctccatctca
     2821 atgagattat tggcagtcat ggttacattg atccagaata tgaaaagacg ggaaagttaa
     2881 aaagagaatc agatatatat agtttcggag tactattgtg tgaagttttt tgtggtaagt
     2941 tacctgattc agcaaattta aaggagagtg atgaaaggtt tgcatatgag gtacgaagat
     3001 gcatccgtga aggagccgtg atgaatatgt tagatcctct aattaaggaa gagattagta
     3061 gtgacggctt tagcctgaat aaaggaccca acaaagattc tttggacgca tttttgaaaa
     3121 tagtagatgc gtgtttggta gagactcaag acaaacgtcc aacaataaaa gttgttgtcg
     3181 aggagctcaa gaaagcctta atgtttcaag aaaacaacaa agatactctc cggatttcat
     3241 atgaggacat aaaattagcc acagaaaact tcgatgataa aaattgtgtt ggcgaaggag
     3301 ggtttgggaa agtttataaa ggaaaacttc cacaaagtga taacacaatt gttgcaaaac
     3361 aattggatac aaggggtggt caaggggata aacagtttca gaatgagctc caaattcttt
     3421 ttaagtacaa gcacggtaat atcattagta ttgtaggcta ttgtgatgaa aaagatgcaa
     3481 aaattattgt ttatgagtat gcgcctagag ggagtcttga taaatatttg ggtgaagctc
     3541 gtcttaattg gatgaaaaga cttaatatat gtataggcgt tgcaactgca ttagattttc
     3601 ttcacagagg aattggaaaa caagcgacgg tgatacatag ggacatcaaa accgctaaca
     3661 ttctactaac taatgactgg aatgcaaaac ttgcagattt tgggctttcc ttgataagtg
     3721 caataaataa ggaaacagac tacgccatcg accgtgcatg cggcacacca ggctacgtgg
     3781 atccacttta cttaaaatcg ggtttcttaa ccaaagaatc cgatatatat tcgtttggtg
     3841 tggttttatt tgagatcttg tgtggacgat caacatttga gacccacaaa cgggaaggta
     3901 tatatctacc aagtttcatt aaccgttgct ttgaaaatga aaaacgtgat gacgtggtgt
     3961 ttgagaaaat aaaagcacag atcatgccga aagcattgac tacattccga aagattgcct
     4021 accggtgctt acgtgaagat agagaaaaac gaccaaaagc aaaagaagtt gtaaaacaac
     4081 ttaagaaggc attgagattt caaatgctga gagatgattt agcttctacc acaagtagct
     4141 agtatcaacc gcaagattgg aagtcaaatg tttgttttca agctttttac agaatctagt
     4201 ggtttgcgtt gtcaggtaaa tggattgtgg ttattgtgtg aaaaaactca acttaaatta
     4261 tgagtttaaa aggctcttcg ttgatataat ttcgtccatt ctttatttgt gtaactgtat
     4321 atgatatgat catatttttg tatatccagt cctataaata agtaatgttg catatatcgg
     4381 gagtactcaa ctagtactcg gcaaaaaagg tctcccgatt actcggtcca attggattac
     4441 ttgttcaaac atagtcaaac tcggtcaaaa ctcggggatt actctgtcaa acttggtcaa
     4501 tagtcgtgat tacttaaaaa atcagtcaaa actaggtcaa aatcagttaa agtcaaactt
     4561 aacttggtca atatccgagt actccccgag tatactccct aaaaattccg accgagtact
     4621 ccccgagtat tgatgtttgc aaccttgtaa ataaatggtt gctccctaga ggtcttaagg
     4681 attttgctgc tgatatttgg cctgatactt cttattttga tggagtctta tctgcgctta
     4741 aatatgttta aggtggttta taaattgata cttatagttt tcatttaaca ttatatatgt
     4801 aatatgtata tatgtatgta tgtattccgg ttttgaaagt gattgaataa tcacagttag
     4861 agcgccttta tgtaaaaatc tct
//
LOCUS       XM_071885869            4880 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903939), transcript variant X4, mRNA.
ACCESSION   XM_071885869
VERSION     XM_071885869.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4880
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4880
                     /gene="LOC139903939"
                     /note="uncharacterized LOC139903939; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903939"
     CDS             129..4139
                     /gene="LOC139903939"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071741970.1"
                     /db_xref="GeneID:139903939"
                     /translation="MESTITKFGHLQIPIEDVLKATDNFDDKNVIGRGELGIVYKGRL
                     LHSGKRVKIAARRLNNKHKHNIEFLREISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKGSLVRYLSNPNLTWNQRLRISVGIARALSYMHKEDGRSYSVIHRNINSSTILLNN
                     KFGAKLSGFEYSINHPVNRMDDVFLSEAIGTRGYVDPEIGKTGGVTHKSDIYSFGVVL
                     LELLCGRKAFLPNEDDKFLVSLVKLKYEENSMVGNLILPCLSAQICHRAQSIFLPAAV
                     FCVKDERVQRPHMKYIVGELEKAFEFQRPYESLNRSSLNQLTSQFSHFKFRLDDITLA
                     TNNFSPAYRIMRNDWYDIYVAGFEHCDEENCVCVEEKNESERPKRRYIYLKRMRPRED
                     KLEEEELFRTDIEMLTTCNHPNIVTPLGICNEDPEKILIVEGSSNGFLAEYLKNKRDK
                     YVLTWEKRLKICLDVANGLKYLHHEMEDQKTVINRYFSTNSIALDESFRAEIVDLVLS
                     VFVPPNQDVHGFGLVVGSPLYSDPEYLRHGKLKRESDVYSLGVAFFEILCGRVANDQM
                     YTTESEVGLAYTARSCFLNGTLMEIIDPIIKEESDDNKDSIDTFVKIAYRCLAETQDQ
                     RPTMKDIIKELEKALSFQKPEQCHKSDQIVDVDGYDKLLDPKSTHEIPEHSNYAVQIP
                     EWKNLKENISKNLKIRLSDILSATNSFSEACIVWHEGHYRVYKAELEHFNQEIIGSVE
                     EKYKSEPPKRRTTALIKRLFVRINQQKQRRESLFLHEIEKLSICKHPNIVTLVGFCDE
                     DSEMILVFENTIKLFLAEHFLDFQKQPHLTWSERLRICLDVAYGMKYLHYEMEEQKVI
                     IHRNIRSRTIALDENLRARIFDFGRSIFLPPYLDDDTLHLNEIIGSHGYIDPEYEKTG
                     KLKRESDIYSFGVLLCEVFCGKLPDSANLKESDERFAYEVRRCIREGAVMNMLDPLIK
                     EEISSDGFSLNKGPNKDSLDAFLKIVDACLVETQDKRPTIKVVVEELKKALMFQENNK
                     DTLRISYEDIKLATENFDDKNCVGEGGFGKVYKGKLPQSDNTIVAKQLDTRGGQGDKQ
                     FQNELQILFKYKHGNIISIVGYCDEKDAKIIVYEYAPRGSLDKYLGEARLNWMKRLNI
                     CIGVATALDFLHRGIGKQATVIHRDIKTANILLTNDWNAKLADFGLSLISAINKETDY
                     AIDRACGTPGYVDPLYLKSGFLTKESDIYSFGVVLFEILCGRSTFETHKREGIYLPSF
                     INRCFENEKRDDVVFEKIKAQIMPKALTTFRKIAYRCLREDREKRPKAKEVVKQLKKA
                     LRFQMLRDDLASTTSS"
     misc_feature    219..1022
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(219..230,237..239,243..245,288..290,294..296,
                     378..380,426..437,576..578,588..593,597..599,627..632)
                     /gene="LOC139903939"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1281..2039
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2382..3191
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    3285..4085
                     /gene="LOC139903939"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3285..3296,3303..3305,3309..3311,3351..3353,
                     3354..3356,3441..3443,3489..3500,3639..3641,3651..3656,
                     3660..3662,3690..3695)
                     /gene="LOC139903939"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 ttgtctgtgg ggggatcaaa ataggaaata tacaatcaac ttttttccgt ttataaagga
       61 gtaacttaca ttccttttat ttgtactcta ttcattcaat aaccagatat atagatctaa
      121 aaggaagtat ggaatctaca atcacgaagt ttggtcactt acaaatccca attgaagacg
      181 tactaaaagc caccgacaac ttcgatgata agaatgtcat cgggcggggt gagttaggaa
      241 tagtttataa aggacggctc ttgcattctg ggaaaagggt gaaaattgcc gctcggagat
      301 taaacaataa gcataagcac aatatcgagt ttttgagaga gatttctgcg ctctctagtc
      361 tcaagcatga aaatattgtc tcgattattg ggttttgtga cgaaaaagga gaaaaggtca
      421 tcataaacaa gcatgaggct aaaggaagcc tcgtgagata tctaagcaac ccaaacctta
      481 catggaatca aaggctgagg ataagtgttg gcattgcacg tgctttaagt tacatgcata
      541 aagaagatgg acgtagttac tctgtcatac accgtaatat caacagctct acgatattat
      601 taaacaataa gtttggggcc aagttatctg gatttgaata ttccatcaac catcctgtta
      661 atcgaatgga tgatgttttc ctttcagaag ctatcggaac aagagggtat gtggaccccg
      721 aaattggaaa gaccggtggt gtgacccaca agtccgacat ttactcattt ggtgttgttt
      781 tattggaatt attatgtggg aggaaagcgt ttttaccaaa tgaggatgat aagtttctag
      841 tttcactggt caaactcaag tatgaagaaa atagtatggt gggtaattta atcctacctt
      901 gtctatccgc tcaaatatgt catagagcac aatcaatttt cttaccagca gcagtatttt
      961 gcgtaaagga tgagcgagta caacgtccac atatgaagta tattgttggc gaacttgaga
     1021 aggcattcga atttcagcgg ccatatgaaa gtttgaatag atccagcttg aatcagttga
     1081 catctcaatt cagtcacttc aagtttaggc tcgatgatat aactctggcc accaacaact
     1141 tttctcccgc ataccgcatc atgagaaacg actggtatga catatacgta gcaggatttg
     1201 aacattgtga tgaagaaaat tgtgtctgtg tagaagaaaa gaatgaaagt gaacgtccca
     1261 agagacgcta tatctattta aaacgcatgc gccctcgaga ggacaaacta gaagaagaag
     1321 aattattccg tacagacatc gaaatgctta caacttgtaa ccatcccaac atagtcactc
     1381 cacttggaat ttgtaatgaa gatccggaaa agatccttat cgtcgaggga tcttctaatg
     1441 gattccttgc tgaatatttg aaaaacaaaa gagataaata tgttcttact tgggaaaaac
     1501 gtttgaaaat atgtcttgat gttgcaaatg gattgaagta tctacaccat gagatggaag
     1561 accaaaagac ggtaataaac cgttatttct ctacaaactc aattgcgtta gatgagagtt
     1621 tcagggcaga gattgttgac ttggtattat cggtcttcgt tcctcctaac caagatgttc
     1681 atggtttcgg tttagttgtt ggctctccat tgtacagtga tcccgaatat ttacgtcatg
     1741 gtaagttaaa aagagaatca gatgtatatt ctttaggagt agcttttttc gaaattttgt
     1801 gtggaagggt agccaacgat caaatgtaca caaccgagag tgaagttgga ctggcatata
     1861 cggcacgcag ttgcttcctt aacggaacac taatggaaat tatagatcct ataattaagg
     1921 aagaaagtga tgacaacaaa gattctatag acacatttgt gaaaattgca tataggtgct
     1981 tggcggaaac tcaagaccaa cgtcctacga tgaaagacat catcaaagag cttgagaaag
     2041 cattatcgtt tcaaaagcca gaacaatgtc ataagtccga ccagattgta gatgtcgatg
     2101 gatatgataa attattagac ccgaaatcga cacatgaaat tcctgaacat tcaaattatg
     2161 cagttcaaat tcctgaatgg aagaatctga aggaaaatat ctcaaagaac cttaaaattc
     2221 gactcagtga tatattatcg gccacaaata gcttttctga ggcatgcatc gtttggcatg
     2281 aaggtcatta tcgggtatac aaagcagaac ttgagcattt caatcaagaa attattggct
     2341 cggtagaaga gaagtataaa agcgaaccac ccaagagacg caccactgca ttaataaaac
     2401 gcctcttcgt tcgaataaac caacaaaaac aacgaagaga aagtttattc ttacacgaaa
     2461 ttgaaaagct tagcatttgt aagcatccta acatagtcac tctagtagga ttttgtgatg
     2521 aagattctga gatgatcctt gtttttgaga acactattaa attattcctt gctgaacatt
     2581 ttctggactt ccagaaacaa cctcatctta catggtctga acgtttgaga atatgccttg
     2641 atgttgcata tggaatgaag tacctacact acgagatgga agaacaaaag gtgataatac
     2701 atcgtaatat aagaagccgc acaattgctt tagacgaaaa tttgagggca cgaatattcg
     2761 actttggtag gtctatattc cttcctcctt atctcgacga cgatactctc catctcaatg
     2821 agattattgg cagtcatggt tacattgatc cagaatatga aaagacggga aagttaaaaa
     2881 gagaatcaga tatatatagt ttcggagtac tattgtgtga agttttttgt ggtaagttac
     2941 ctgattcagc aaatttaaag gagagtgatg aaaggtttgc atatgaggta cgaagatgca
     3001 tccgtgaagg agccgtgatg aatatgttag atcctctaat taaggaagag attagtagtg
     3061 acggctttag cctgaataaa ggacccaaca aagattcttt ggacgcattt ttgaaaatag
     3121 tagatgcgtg tttggtagag actcaagaca aacgtccaac aataaaagtt gttgtcgagg
     3181 agctcaagaa agccttaatg tttcaagaaa acaacaaaga tactctccgg atttcatatg
     3241 aggacataaa attagccaca gaaaacttcg atgataaaaa ttgtgttggc gaaggagggt
     3301 ttgggaaagt ttataaagga aaacttccac aaagtgataa cacaattgtt gcaaaacaat
     3361 tggatacaag gggtggtcaa ggggataaac agtttcagaa tgagctccaa attcttttta
     3421 agtacaagca cggtaatatc attagtattg taggctattg tgatgaaaaa gatgcaaaaa
     3481 ttattgttta tgagtatgcg cctagaggga gtcttgataa atatttgggt gaagctcgtc
     3541 ttaattggat gaaaagactt aatatatgta taggcgttgc aactgcatta gattttcttc
     3601 acagaggaat tggaaaacaa gcgacggtga tacataggga catcaaaacc gctaacattc
     3661 tactaactaa tgactggaat gcaaaacttg cagattttgg gctttccttg ataagtgcaa
     3721 taaataagga aacagactac gccatcgacc gtgcatgcgg cacaccaggc tacgtggatc
     3781 cactttactt aaaatcgggt ttcttaacca aagaatccga tatatattcg tttggtgtgg
     3841 ttttatttga gatcttgtgt ggacgatcaa catttgagac ccacaaacgg gaaggtatat
     3901 atctaccaag tttcattaac cgttgctttg aaaatgaaaa acgtgatgac gtggtgtttg
     3961 agaaaataaa agcacagatc atgccgaaag cattgactac attccgaaag attgcctacc
     4021 ggtgcttacg tgaagataga gaaaaacgac caaaagcaaa agaagttgta aaacaactta
     4081 agaaggcatt gagatttcaa atgctgagag atgatttagc ttctaccaca agtagctagt
     4141 atcaaccgca agattggaag tcaaatgttt gttttcaagc tttttacaga atctagtggt
     4201 ttgcgttgtc aggtaaatgg attgtggtta ttgtgtgaaa aaactcaact taaattatga
     4261 gtttaaaagg ctcttcgttg atataatttc gtccattctt tatttgtgta actgtatatg
     4321 atatgatcat atttttgtat atccagtcct ataaataagt aatgttgcat atatcgggag
     4381 tactcaacta gtactcggca aaaaaggtct cccgattact cggtccaatt ggattacttg
     4441 ttcaaacata gtcaaactcg gtcaaaactc ggggattact ctgtcaaact tggtcaatag
     4501 tcgtgattac ttaaaaaatc agtcaaaact aggtcaaaat cagttaaagt caaacttaac
     4561 ttggtcaata tccgagtact ccccgagtat actccctaaa aattccgacc gagtactccc
     4621 cgagtattga tgtttgcaac cttgtaaata aatggttgct ccctagaggt cttaaggatt
     4681 ttgctgctga tatttggcct gatacttctt attttgatgg agtcttatct gcgcttaaat
     4741 atgtttaagg tggtttataa attgatactt atagttttca tttaacatta tatatgtaat
     4801 atgtatatat gtatgtatgt attccggttt tgaaagtgat tgaataatca cagttagagc
     4861 gcctttatgt aaaaatctct
//
LOCUS       XM_071885870             662 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides jasmonate ZIM
            domain-containing protein 1-like (LOC139903940), mRNA.
ACCESSION   XM_071885870
VERSION     XM_071885870.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..662
                     /gene="LOC139903940"
                     /note="jasmonate ZIM domain-containing protein 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139903940"
     CDS             18..590
                     /gene="LOC139903940"
                     /codon_start=1
                     /product="jasmonate ZIM domain-containing protein 1-like"
                     /protein_id="XP_071741971.1"
                     /db_xref="GeneID:139903940"
                     /translation="MSSAKTSTFAKTFNRLNSFLKEKGSLKDLGIINANFDIAGKHEN
                     ETTTVDLLSHMEKSTNSLPQCVNLNDVTTENQQSEQMTIFYEGKVIVFDCISSDKAKN
                     VMLAASRVSSNNQMQNRVQLASTSDCEGFGLREQMIIRGLEINGSDLPIARRASLHKF
                     LAKRRDRGNVRVAPYELQNPSRTHKFDLNL"
     misc_feature    243..341
                     /gene="LOC139903940"
                     /note="tify domain; Region: tify; pfam06200"
                     /db_xref="CDD:461847"
     misc_feature    465..542
                     /gene="LOC139903940"
                     /note="Jas motif; Region: Jas_motif; pfam09425"
                     /db_xref="CDD:430603"
ORIGIN      
        1 tatttgatta attaattatg tcttccgcta aaacttctac tttcgcaaaa actttcaatc
       61 gattaaattc gtttctgaaa gaaaaaggca gtctcaaaga tctaggaatc atcaatgcaa
      121 actttgatat tgcaggaaaa cacgagaacg aaaccacaac cgttgatctg ttaagtcaca
      181 tggaaaaatc aacaaattcg cttccgcagt gtgttaattt gaatgatgtt accacggaaa
      241 atcaacaaag cgaacaaatg actattttct acgaaggaaa agtgattgta tttgattgta
      301 tttcatctga taaagcgaaa aatgtgatgt tagcagctag tcgtgtttct tctaataatc
      361 aaatgcagaa tcgagttcaa ttggcttcta catctgattg tgaaggtttt ggattacgtg
      421 aacagatgat tattcgggga ttagaaatta acggatcgga tttaccgatt gcgagacgcg
      481 cgtcgctaca taaatttttg gccaagagac gagacagggg aaatgtaaga gtggcgcctt
      541 atgaattaca gaatccttca agaactcata agtttgatct caatttgtag ttatattttt
      601 agattcgatt cgtatagata ctgtaaaaga tttgtgattg ttttttgttt tggtcttact
      661 aa
//
LOCUS       XM_071885871            1604 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides oligouridylate-binding
            protein 1B-like (LOC139903941), mRNA.
ACCESSION   XM_071885871
VERSION     XM_071885871.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1604
                     /gene="LOC139903941"
                     /note="oligouridylate-binding protein 1B-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139903941"
     CDS             106..1389
                     /gene="LOC139903941"
                     /codon_start=1
                     /product="oligouridylate-binding protein 1B-like"
                     /protein_id="XP_071741972.1"
                     /db_xref="GeneID:139903941"
                     /translation="MQHQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSG
                     NLPPGFDPNTCRSVYVGNVHTQVTEPLLQEVFASTGPVEGCKLIRKDKSSYGFIHYFD
                     RRSAALAILSLNGRHLFGQPIKVNWAYTSGQREDTSGHFNIFVGDLSPEVTDSMLFAC
                     FSVYGSCSDARVMWDQKTGHSRGFGFVSFRNQQDAQSAINDSTGKWLGSRQIRCNWAT
                     KGAGTIDEKQASDSKSVVELTNGSSEDSKEPVNGDAPENNPQYTTVYVGNLAPEVTQL
                     ELHRHFHSLGVGVIEEVRVQPDKGFGFVRYNNHAEAALAIQMGNTQSILYGKPIKCSW
                     GSKPTPPGTSSNPLPPPVPAPMLSAADMLAYERQIAISKMAGVHGLMHHPQGQHPFKP
                     VTMGMSMGGGAGASQAIYDGGFQNVAAAQQLMYYQ"
     misc_feature    277..489
                     /gene="LOC139903941"
                     /note="RNA recognition motif 1 (RRM1) found in yeast
                     nuclear and cytoplasmic polyadenylated RNA-binding protein
                     PUB1 and similar proteins; Region: RRM1_PUB1; cd12614"
                     /db_xref="CDD:410026"
     misc_feature    523..762
                     /gene="LOC139903941"
                     /note="RNA recognition motif 2 (RRM2) found in yeast
                     nuclear and cytoplasmic polyadenylated RNA-binding protein
                     PUB1 and similar proteins; Region: RRM2_PUB1; cd12619"
                     /db_xref="CDD:410031"
     misc_feature    889..1119
                     /gene="LOC139903941"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     polyA_site      1604
                     /gene="LOC139903941"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttatttca attgattgaa accctaaccc ccaaattcga cacactacaa atttaattaa
       61 tttctattct atttatttcc aaaaatataa gattaattaa aaagaatgca acatcaacat
      121 caaaggctga aacaacagca acaacaagct ttgatgcaac aagctctcct tcaacaacaa
      181 tcgttatatc atcctggcct tttagcacct ccacagattg agcctatccc aagtggaaat
      241 ctgcctcctg ggtttgatcc aaatacatgc cgcagtgtgt atgtggggaa cgttcataca
      301 caagtgactg aaccacttct tcaggaagta tttgcaagta ctggtcctgt tgaaggctgc
      361 aaactcataa gaaaagacaa gtcatcttat gggttcattc actactttga tcgtagatca
      421 gctgcacttg ctatattatc cttaaatggg aggcatttat ttggacaacc cattaaagtg
      481 aattgggcct atacaagtgg acaaagggag gacacgtcag gtcactttaa tatatttgtt
      541 ggtgatctta gtcctgaagt tacggattct atgctgtttg catgcttctc tgtttacggt
      601 agttgctcgg acgcaagggt tatgtgggac cagaaaacgg gccattcacg aggttttggc
      661 tttgtctcct ttcggaacca acaggatgct caaagtgcga taaatgattc gactgggaag
      721 tggcttggca gtagacagat acgttgcaat tgggctacaa aaggtgctgg tactattgat
      781 gaaaaacagg cttcggattc aaaaagtgtg gttgagttaa caaatggttc ttcagaggat
      841 agtaaggagc ctgttaatgg tgatgctcct gagaataacc cacagtatac cactgtttat
      901 gtcggcaacc ttgctcctga agttactcag cttgagctcc atcgccattt ccattctctt
      961 ggtgttggcg taattgagga ggtgcgggtg cagccagata aagggttcgg ctttgttaga
     1021 tacaataacc atgccgaggc tgctttggct attcaaatgg gaaacacaca atccattctt
     1081 tatggtaaac caattaagtg ttcttgggga agcaagccaa ctcctccagg aacgagttca
     1141 aacccgcttc caccacccgt acctgcacca atgctgtcgg ctgctgatat gttggcatac
     1201 gagagacaaa tagcaataag caagatggca ggggtgcatg ggcttatgca tcatcctcaa
     1261 ggacaacatc cttttaaacc agtaactatg ggtatgagta tgggtggtgg tgctggagca
     1321 agccaggcta tttatgacgg tggttttcag aatgttgctg ctgcgcaaca actcatgtat
     1381 taccagtgag tgattattta gcattatcgc gtgcttacgt tgtttgtgtt tacgagtttg
     1441 taggaggtgt attgatgtac gtatttgttt ttgttttttt tatcgttatt ttttcttcat
     1501 ttcatcttcc cattgttgtt ttgcttatat gcggttgcca tggttatgga tacatatgat
     1561 gtatgttaat gatagtgatt ggaatgcctg tttgttcgag ttga
//
LOCUS       XM_071885872            1046 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 25.3 kDa vesicle transport
            protein SEC22-1-like (LOC139903942), transcript variant X1, mRNA.
ACCESSION   XM_071885872
VERSION     XM_071885872.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1046
                     /gene="LOC139903942"
                     /note="25.3 kDa vesicle transport protein SEC22-1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139903942"
     CDS             147..803
                     /gene="LOC139903942"
                     /codon_start=1
                     /product="25.3 kDa vesicle transport protein SEC22-1-like"
                     /protein_id="XP_071741973.1"
                     /db_xref="GeneID:139903942"
                     /translation="MVKLTMIARVTDGLPLAEGLDDGRDMQDADFYKQQVKALFKNLS
                     RGHNEASRMSVETGPYIFHYIIEGRVCYLTMCERAYPKKLAFQYLEDLRNEFERGYAN
                     QIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGV
                     GEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVLGVVILLFWVRKKIW
                     "
     misc_feature    159..527
                     /gene="LOC139903942"
                     /note="longin domain; Region: Longin; cd14824"
                     /db_xref="CDD:341428"
     misc_feature    order(189..191,198..200,204..206,243..245,255..257,
                     498..500,510..512,519..521)
                     /gene="LOC139903942"
                     /note="Sec22 interface [polypeptide binding]; other site"
                     /db_xref="CDD:341428"
     misc_feature    order(240..242,249..251,315..317,324..326,330..332)
                     /gene="LOC139903942"
                     /note="lipid binding site [chemical binding];
                     lipid-binding site"
                     /db_xref="CDD:341428"
     misc_feature    order(312..314,321..323,381..383,393..395)
                     /gene="LOC139903942"
                     /note="VARP interface [polypeptide binding]; other site"
                     /db_xref="CDD:341428"
     misc_feature    543..734
                     /gene="LOC139903942"
                     /note="SNARE motif of SEC22; Region: R-SNARE_SEC22;
                     cd15866"
                     /db_xref="CDD:277219"
     misc_feature    order(549..557,561..566,570..587,591..599,603..605,
                     612..617,621..629,633..650,654..671,675..692,696..713,
                     717..725)
                     /gene="LOC139903942"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277219"
     misc_feature    624..626
                     /gene="LOC139903942"
                     /note="zero layer; other site"
                     /db_xref="CDD:277219"
ORIGIN      
        1 atcaattaaa aatttgtcct tacaaaaccc taaaactgcg aaatttcgga ttctattcat
       61 tttcctaaac gatcaatgta ggtcaaatca actcgaaatc aaaatcaaat ttcagtttgt
      121 atagttgata gcttctcata gtaaagatgg tgaagctgac aatgattgct cgtgtaactg
      181 acggtcttcc actagctgaa ggattggatg atgggcgtga tatgcaggat gccgatttct
      241 acaaacagca agttaaggcg ttgttcaaga atctttcaag aggacataat gaagcatcac
      301 ggatgtctgt tgaaaccggc ccttacattt tccactatat tattgaaggg cgggtatgtt
      361 atttgacaat gtgtgaacgt gcttacccaa aaaagcttgc gtttcaatac cttgaagacc
      421 tcagaaatga atttgagcgt ggttatgcaa atcaaattga aactgcagca aggccttatg
      481 ctttcattaa atttgataca tttatacaga agactaagaa gttgtaccag gacacgagaa
      541 ctcaacgaaa tatttccaag ctgaatgatg aactttatga agtacaccaa ataatgaccc
      601 gtaatgtgca ggaagttctt ggtgttggtg aaaagttgga ccaggtcagt caaatgtcaa
      661 gtcgattaac ttcagagtct cgcatatatg ctgacaaagc aagagatctt aatcgacagg
      721 cattgatccg gaaatgggct cctgtcgcaa ttgtccttgg agtcgtcatt ttactctttt
      781 gggttagaaa gaagatatgg tgattatgcc ttctttttat atatgagaaa gcatatcttc
      841 ttgtattcta tcgtttttgg gagcttaagt gaacttttct cacacctatc aatacaaaaa
      901 ttcatttgac ccgtgaactc gcatgtctta gattatggct gtattattgg cgtagttatt
      961 agctatatgg attgtagagg ttatgttgca tcttaacttt gcatttagaa cgtatttact
     1021 ttatcttttg gattagtgga attcat
//
LOCUS       XM_071885873            1015 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 25.3 kDa vesicle transport
            protein SEC22-1-like (LOC139903942), transcript variant X2, mRNA.
ACCESSION   XM_071885873
VERSION     XM_071885873.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1015
                     /gene="LOC139903942"
                     /note="25.3 kDa vesicle transport protein SEC22-1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139903942"
     CDS             116..772
                     /gene="LOC139903942"
                     /codon_start=1
                     /product="25.3 kDa vesicle transport protein SEC22-1-like"
                     /protein_id="XP_071741974.1"
                     /db_xref="GeneID:139903942"
                     /translation="MVKLTMIARVTDGLPLAEGLDDGRDMQDADFYKQQVKALFKNLS
                     RGHNEASRMSVETGPYIFHYIIEGRVCYLTMCERAYPKKLAFQYLEDLRNEFERGYAN
                     QIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGV
                     GEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVLGVVILLFWVRKKIW
                     "
     misc_feature    128..496
                     /gene="LOC139903942"
                     /note="longin domain; Region: Longin; cd14824"
                     /db_xref="CDD:341428"
     misc_feature    order(158..160,167..169,173..175,212..214,224..226,
                     467..469,479..481,488..490)
                     /gene="LOC139903942"
                     /note="Sec22 interface [polypeptide binding]; other site"
                     /db_xref="CDD:341428"
     misc_feature    order(209..211,218..220,284..286,293..295,299..301)
                     /gene="LOC139903942"
                     /note="lipid binding site [chemical binding];
                     lipid-binding site"
                     /db_xref="CDD:341428"
     misc_feature    order(281..283,290..292,350..352,362..364)
                     /gene="LOC139903942"
                     /note="VARP interface [polypeptide binding]; other site"
                     /db_xref="CDD:341428"
     misc_feature    512..703
                     /gene="LOC139903942"
                     /note="SNARE motif of SEC22; Region: R-SNARE_SEC22;
                     cd15866"
                     /db_xref="CDD:277219"
     misc_feature    order(518..526,530..535,539..556,560..568,572..574,
                     581..586,590..598,602..619,623..640,644..661,665..682,
                     686..694)
                     /gene="LOC139903942"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277219"
     misc_feature    593..595
                     /gene="LOC139903942"
                     /note="zero layer; other site"
                     /db_xref="CDD:277219"
ORIGIN      
        1 caaaacccta aaactgcgaa atttcggatt ctattcattt tcctaaacga tcaatgtagg
       61 tcaaatcaac tcgaaatcaa aatcaaattt cagttgatag cttctcatag taaagatggt
      121 gaagctgaca atgattgctc gtgtaactga cggtcttcca ctagctgaag gattggatga
      181 tgggcgtgat atgcaggatg ccgatttcta caaacagcaa gttaaggcgt tgttcaagaa
      241 tctttcaaga ggacataatg aagcatcacg gatgtctgtt gaaaccggcc cttacatttt
      301 ccactatatt attgaagggc gggtatgtta tttgacaatg tgtgaacgtg cttacccaaa
      361 aaagcttgcg tttcaatacc ttgaagacct cagaaatgaa tttgagcgtg gttatgcaaa
      421 tcaaattgaa actgcagcaa ggccttatgc tttcattaaa tttgatacat ttatacagaa
      481 gactaagaag ttgtaccagg acacgagaac tcaacgaaat atttccaagc tgaatgatga
      541 actttatgaa gtacaccaaa taatgacccg taatgtgcag gaagttcttg gtgttggtga
      601 aaagttggac caggtcagtc aaatgtcaag tcgattaact tcagagtctc gcatatatgc
      661 tgacaaagca agagatctta atcgacaggc attgatccgg aaatgggctc ctgtcgcaat
      721 tgtccttgga gtcgtcattt tactcttttg ggttagaaag aagatatggt gattatgcct
      781 tctttttata tatgagaaag catatcttct tgtattctat cgtttttggg agcttaagtg
      841 aacttttctc acacctatca atacaaaaat tcatttgacc cgtgaactcg catgtcttag
      901 attatggctg tattattggc gtagttatta gctatatgga ttgtagaggt tatgttgcat
      961 cttaactttg catttagaac gtatttactt tatcttttgg attagtggaa ttcat
//
LOCUS       XM_071885874            3882 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903943), mRNA.
ACCESSION   XM_071885874
VERSION     XM_071885874.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3882
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3882
                     /gene="LOC139903943"
                     /note="uncharacterized LOC139903943; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139903943"
     CDS             160..3606
                     /gene="LOC139903943"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741975.1"
                     /db_xref="GeneID:139903943"
                     /translation="MELDTPIDYAAFQLSPRHSRCELFVSINGNSEKIASGLVKPFMT
                     HLKVVEEQVALSVQSIKLEVNKCKRVDSWFTKGTLERFVRFVSTPEIIELVNTFDSEM
                     SQLEAARRIYSLGSSDELSSKKGDGRSSTTGADATKKELMRAIDTRLTAVKQDLSTAC
                     ARATSAGFNHVTVANLRLFAETFGAARLNEACCKYISLYERRPELFDHSSKSSFGDQA
                     VRCSYSSDMSIDDDAPPIITTNHQSSSLKADQSTKLLHKSSSSSNFCSEPSNAAKDET
                     VSAADEPLAQTATQPSSRRLSVQDRINLFENKQKEVGSASGSGGKPPAIAKPELRRLS
                     SDVSNTNAVPPPAVLRRWSGASDMSVDLSVEKGTDSPKPPLIETQTEVKKSQTNSQDW
                     VGSSSSLKNEEDVQIVKTEATSVTREESVGSNQPTSTLEKTQTQSWSSLTKPEDNFLV
                     PRLKPPTQIKSHLGGNQAEIRPPNVEILHDGADARPVDSESKPTVIKAPLKTSHHRSV
                     SGSKIQAAVTASRLEIGSLRSQTRSKYPVETKESVTVGSGPMPSEEPVVDQTQRSRQL
                     KGNQELNDELKLKANELEKLFAEHKLRAPVEQPNNARRTKPSEDQHTPVPTKVFEPKT
                     KLKSPVELTEIDGQLHRDALQRSFSEVGISEDSRGKFYDGYMRKREEKLKEQWGSNKM
                     EKEARLKAMHDSFERSNAEIKAKLSWSADRQDSVSTARRRAEKLRSFNARSAIKRVDF
                     GQIEDDEDLSEFSEMKVGNRKKTLPIKNSSTSTPRTPVVPVPRSGAKVTSGSGKRRVQ
                     TENFLAQSVPNFSDLRKENTKAYAVASKAAARSQLRSHTRSRSTNEETPPVKEEKSGR
                     SQSLRKNPSNIPESSEGVIVELKSFHRRNNSLGGNGALKMKASAVVIKNEEEYEPDEE
                     DEFDTTEIEGDDVADETELKNESSINSGNGQTDPNLTTELLMQDSPGESPMSWNSHSH
                     IDLPFSYAHDNDADTWNFNSTDSEVARMRKKWGSTQKNILVAANSSPSFQSRKDMTKG
                     IKRLLKFGRKSRGTDNIADWISATTSEGDDDTEDGRDVSNRSSDELRKSRMGYSHESS
                     FNETEFFGADQVHTLQSSIPTPPENFRPRDDQLSGSSIKAPRSFFSLSSFRSKGSDSK
                     LR"
     misc_feature    <1867..2559
                     /gene="LOC139903943"
                     /note="DNA topoisomerase 2-like protein; Provisional;
                     Region: PTZ00108"
                     /db_xref="CDD:240271"
ORIGIN      
        1 ataaaaccca aaaacaaaaa ataaactttg tttcttcgag ttcacacagt ataaccgcaa
       61 tgtatgttta tttttaactt tgaatcaagg atcgatggtg taaatcaaag atctttacat
      121 tattgttgcg aaaggatctt taaggtgtaa tagtgaaata tggaattaga tacacctata
      181 gattatgcag catttcagct ctcacctaga cattcaagat gtgaattgtt tgtttccatt
      241 aatggaaata gtgagaagat tgcatcgggt ttagtgaagc cgtttatgac tcatttaaag
      301 gttgtagagg aacaagttgc attatcagtt caatctatta aacttgaagt aaataaatgt
      361 aaaagggtgg actcttggtt cacaaaggga acactagaga ggtttgtgcg ttttgtgagt
      421 acgccggaaa ttatagaatt agtgaatact ttcgattccg agatgtctca gttagaagca
      481 gctcgtagaa tatattcact ggggtcatcg gatgagcttt cgagtaaaaa aggtgatggt
      541 agatcaagca caacaggtgc cgatgcaaca aagaaggaac ttatgagggc aattgataca
      601 aggctgactg cagtgaagca ggacttgagt actgcttgtg ctcgtgctac ttctgcgggt
      661 ttcaaccatg ttactgtagc caaccttcgg ttatttgctg agacgtttgg tgccgctcgc
      721 ttaaatgaag cttgctgtaa atacatatca ctctacgaaa gacggccgga gttatttgat
      781 cactcatcga agtctagttt tggagatcaa gccgtgcggt gctcgtacag ctcagacatg
      841 tctatcgatg acgacgcacc accaatcatc accaccaacc accagtcttc atcacttaag
      901 gctgaccaat ctaccaaact tctacacaag tcttcttcat ctagtaattt ttgttcagaa
      961 cctagcaatg cagcgaaaga tgaaacggtt tcagccgctg atgaaccgtt ggctcagaca
     1021 gctacacaac cgtcttctag gcggctgagt gtgcaagacc gtatcaatct ttttgaaaac
     1081 aagcagaagg aagtggggtc cgcctccggg agtggcggca aaccaccagc cattgctaag
     1141 cctgagcttc gtaggctttc gtccgatgtc tcaaatacaa acgcagttcc tcctccagcc
     1201 gtacttagaa gatggagcgg tgctagtgat atgagcgttg acttgagtgt cgagaaggga
     1261 accgacagtc caaagccccc tttgatcgag acacaaaccg aggttaagaa aagtcaaaca
     1321 aattcgcaag attgggtagg tagttctagt tctctcaaaa acgaagaaga cgtacaaatt
     1381 gttaagaccg aggctacttc ggttacacgt gaagaatccg ttggttctaa ccaacccact
     1441 tctacgttag agaagacaca gacacagtct tggtcgtcgt taaccaagcc tgaggataat
     1501 tttctcgtgc cacgcttaaa gcctccgact caaatcaagt cacatcttgg tggcaatcaa
     1561 gccgaaatcc ggcctccaaa tgtcgaaatt ttacacgatg gggcagatgc gagaccggtt
     1621 gactcggagt caaaaccaac ggttataaag gccccattga agacgagtca tcatagaagt
     1681 gtttcgggat caaaaattca ggcagctgtt actgcttccc ggcttgagat tggttcatta
     1741 cgctcccaaa ccaggtccaa atatccagta gaaactaagg aatctgttac ggtggggtcc
     1801 gggccaatgc catcggaaga accagttgtt gaccaaacgc agaggtcacg gcaattaaaa
     1861 ggaaaccaag aacttaacga cgaacttaaa ctgaaagcta atgagttaga aaagcttttc
     1921 gctgagcata aacttagagc cccagtcgaa caacctaata atgcacgccg aactaagcct
     1981 tctgaagatc aacacacacc tgttcctact aaggtttttg aacctaagac gaaacttaaa
     2041 tctccggttg agttaacgga aattgacggt caacttcacc gagatgcact tcaacgaagt
     2101 ttttccgagg tgggaatatc agaagattca cgaggaaagt tttatgacgg ttacatgaga
     2161 aaacgagagg aaaagttaaa ggaacaatgg ggttctaaca aaatggaaaa agaagctagg
     2221 ttgaaagcga tgcatgatag cttcgaacgt agtaatgccg aaataaaagc aaaactttcg
     2281 tggtctgctg atagacaaga ttctgtatct actgctcgtc gacgtgctga gaagttgaga
     2341 tcgttcaatg ctcgatctgc catcaagcga gtggattttg ggcagattga agacgatgaa
     2401 gatttatcgg agttttcaga gatgaaagtt ggcaaccgta aaaaaacgtt accgattaaa
     2461 aattcatcaa cgtcgacacc acgtacaccg gttgtaccag ttccaagatc tggtgcgaaa
     2521 gtaacttcgg ggtctgggaa acgaagggta caaacggaaa attttcttgc acagtcggtc
     2581 ccgaactttt cggatttaag aaaagagaat acgaaagcgt atgctgtagc cagcaaagcg
     2641 gctgctcgtt ctcagttgag aagccataca cgaagcagaa gcaccaatga agagacgcca
     2701 cctgtcaaag aagagaaatc gggacgctct cagtctttaa ggaagaaccc ctccaatatt
     2761 cccgagagct cagaaggcgt tatcgtggaa ctgaagtcgt ttcataggag gaacaatagc
     2821 ttaggtggaa acggtgcgtt gaaaatgaag gcttcagcgg tcgtaataaa aaacgaagaa
     2881 gaatacgagc cggacgagga agatgaattc gatactacgg aaatcgaagg tgatgatgtg
     2941 gcagacgaga ccgagttgaa aaacgagagt tcaattaact ctggaaacgg tcaaacggat
     3001 cctaatttga ccacggaatt attaatgcaa gattcacctg gtgaaagtcc gatgtcatgg
     3061 aactcgcact cgcacatcga tcttccgttt tcttacgctc acgataacga tgcagataca
     3121 tggaatttta attcgacaga ttcggaagta gctcgaatga ggaagaaatg gggaagtacg
     3181 caaaagaata ttctcgttgc tgctaattca tctcctagtt ttcaatcacg taaagatatg
     3241 acgaaaggaa ttaaacgatt attaaaattt ggaagaaaaa gccgtggtac tgataatatt
     3301 gctgactgga tttctgctac gacttctgag ggagacgatg atactgaaga tggaagagac
     3361 gtttcaaatc gatcctcaga tgaactacga aagtcgagaa tggggtattc acatgaaagc
     3421 agctttaacg aaactgagtt ttttggtgca gatcaagttc atacattaca gagctcaatc
     3481 ccaacacctc cagaaaactt cagaccaagg gatgatcaac tttctggaag ctctattaaa
     3541 gctcctcgat ctttcttctc gttgtcatca tttcggagca agggaagtga ctcaaagcta
     3601 agatgagttg gtgttgatcg atcgatggta tatatataaa aaacgtaacg gatgattgat
     3661 tgttgttggc aaatatttca acatgttgtg ggagtcggct tctgattatt tttggttgta
     3721 tattgtattc cttgaggtaa gtagccaatt ggccaaacct tattgctgaa ttctgtagtt
     3781 ctaatgaagc aagtattcca atattttttt ttgcctatgt acacataaca cttgaattga
     3841 actacaaatt catgtaatat tgagcttctt ttcttaaaga aa
//
LOCUS       XM_071885875            1163 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein uS2-like (LOC139903944), mRNA.
ACCESSION   XM_071885875
VERSION     XM_071885875.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1163
                     /gene="LOC139903944"
                     /note="small ribosomal subunit protein uS2-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139903944"
     CDS             100..981
                     /gene="LOC139903944"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS2-like"
                     /protein_id="XP_071741976.1"
                     /db_xref="GeneID:139903944"
                     /translation="MAAPKVLTPKEADIQMMLSAEVHLGTKNCDYQMERYVFKRRNDG
                     IYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRH
                     TPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGI
                     PANNKGKHSIGCLFWLLARMVLQMRGVINQGHKWDIMVDLFFYREPEEAKEPEDEAIV
                     ADYKDYDAGAIGLDDQWASQITDAQWSGDVVQPPIAGAPVAAGGWTADAPVAGGDGWE
                     GAAPPVPAAEGAATGWE"
     misc_feature    100..783
                     /gene="LOC139903944"
                     /note="40S ribosomal protein SA; Provisional; Region:
                     PTZ00254"
                     /db_xref="CDD:240331"
     misc_feature    700..978
                     /gene="LOC139903944"
                     /note="40S ribosomal protein SA C-terminus; Region:
                     40S_SA_C; pfam16122"
                     /db_xref="CDD:465029"
     polyA_site      1163
                     /gene="LOC139903944"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaatattca tcatacgccg ttagcagccc acctacaccc accttcgtgc tttcactctc
       61 taatctccac caaaatcaaa ttccgatcag gaaacgaaaa tggcggcccc gaaggtatta
      121 acaccaaaag aagcagacat acaaatgatg ttgtctgccg aagtccatct cggcaccaaa
      181 aactgtgatt accagatgga acgttacgtc ttcaagcgcc gcaatgatgg tatttacatt
      241 attaacctcg ggaaaacatg ggagaaattg caaatggcgg ctagggtgat tgttgctatt
      301 gagaacccac aggacattat cgtccaatct gctaggccgt atggtcagag ggctgtgttg
      361 aagtttgcac agtataccgg tgctcatgct attgctggac gtcacactcc cggtactttc
      421 actaaccagc ttcagacctc gttcagtgag ccgaggctcc tcattttgac tgacccacgt
      481 accgatcatc agcctattaa ggaagctgct cttggaaaca ttcccactat cgctttttgc
      541 gatactgatt cacctatgag gtatgttgac attggtatcc cagccaacaa caaggggaaa
      601 cacagtatcg ggtgcttgtt ttggcttctc gcaaggatgg ttttgcagat gcgaggtgtg
      661 atcaaccaag gtcataagtg ggatattatg gttgatctgt tcttctacag agaaccagaa
      721 gaggcgaagg agccagaaga tgaagctata gtagctgact acaaggatta cgatgctggt
      781 gctattggat tggatgacca atgggcatct cagatcactg atgctcaatg gtctggtgat
      841 gttgttcaac caccgattgc tggtgcccct gttgctgcag gtggctggac tgctgatgct
      901 ccagtggctg gtggtgatgg atgggaaggt gcggcaccac cagtacctgc agctgaaggt
      961 gcggctactg gttgggaatg aacttgaact tcatgtttat ttctatgatt atatctaaag
     1021 atttggcaga atgatatgag tggtgataat tttgtatttg tgactgattg ttaaagttgt
     1081 tttttgtagc agcaacttgt ttatgtagtt ttattatggt ggataatttt taagcattat
     1141 aaattgcgga acaagtaaac cta
//
LOCUS       XM_071885876            3128 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphoinositide phosphatase
            SAC2-like (LOC139903945), mRNA.
ACCESSION   XM_071885876
VERSION     XM_071885876.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3128
                     /gene="LOC139903945"
                     /note="phosphoinositide phosphatase SAC2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139903945"
     CDS             284..2569
                     /gene="LOC139903945"
                     /codon_start=1
                     /product="phosphoinositide phosphatase SAC2-like"
                     /protein_id="XP_071741977.1"
                     /db_xref="GeneID:139903945"
                     /translation="MTSENEQHDWITEVPSVSISYLQKFRLYETRSNFYMIGRSKNRS
                     AWRVLKIDRSEPSELNITEDPTIYTEIECSELLKRINDGNKSTGGLRFVYACYGIVGF
                     IKFLGPYYMLLITKRRKIGVICGHAVYAITKSEILPIPHSTVQLSVAYSKNENRYKKL
                     LCSVDLTKDFYFSYSYRVMHSFQNNLSTQDPPNETMFVWNKFLTTMIQNQLRNNLWTV
                     QLVYGYFKQVSLSIAEKDFKLTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVF
                     EDVPEGCPVQISSVVQHRGSIPLFWSQETSRLNIKPDIILSKKDQNYDATRLHFENLT
                     KRYGNPIIILNLIKTKEKRPRESLLRMEFAHAIESINKDLPAENRLKFLHWDLNKYSR
                     NKSTNVLALLGKVATYALNLTGFFYCQVIPNSKSQDHQNLSSGGESGNINVKPTKQQT
                     GVLRTNCIDCLDRTNVAQYAYGWAALGRQLQSIGYIDTPIIELDSNLADYLMRIYERM
                     GDTLALQYGGSAAHNKIFCQRRGQWKAATQSQELFRTLQRYYSNAYMDAEKQDAINVF
                     LGHYQPQIGRPALWELDSDQHYNVGGQGSNTYVDRTRIIKRSLSVGNILYDGNIVRNS
                     SIGTAQKDEESLNENSVESDSSYSRCANSSSGPDLTSEEMPNSDRIFYNKDSFNCSNF
                     LDVDWLSSSGNSCEDETFERSTLVGSPIGGQSSDYVVNEMCTFASDSEMSPCVQDGRS
                     PVGGGFSDRFAEWVTNGDTFL"
     misc_feature    572..1459
                     /gene="LOC139903945"
                     /note="SacI homology domain; Region: Syja_N; pfam02383"
                     /db_xref="CDD:460545"
ORIGIN      
        1 tctattgata tatatatata tatacctgta cctgtattat atctgtatat taatatttgt
       61 ttctatttct atgtaatgta attaccggat ctgtatcttt atccttctcc gatctactac
      121 tcgattaaca tcacaatcta tcgaacttac gtttatgatt atgatgtgtg gaactgcaga
      181 atgctaaaat tagggtttcc agtgccctag ttcaacttca aattcgttcg aacttgtatg
      241 tatacctgat atagcccggg cgtaaggctc gggatccgga ataatgacgt cagagaatga
      301 gcaacatgat tggatcacag aagtgcctag tgttagcatt tcgtatttgc aaaaattcag
      361 actctacgag actcgctcta acttctatat gattggacgt agtaagaata gatcagcttg
      421 gagagtgtta aagatcgaca ggtcagaacc ttccgagcta aatattactg aagatccgac
      481 gatatacact gaaatagaat gctctgaact tctaaagcgt attaatgatg gaaataagtc
      541 cacagggggg cttagatttg tatatgcttg ttatggaatt gttgggttca taaagttttt
      601 gggaccttat tacatgctgc ttatcacaaa acgaaggaag attggtgtaa tttgtggtca
      661 tgcagtatat gcaattacca agagcgagat cttaccaatt ccccattcta ctgtgcagct
      721 cagtgtggcc tactctaaga acgagaacag gtacaaaaag ctcctatgct cagtggatct
      781 tacaaaagac ttctatttca gctactcgta tcgtgttatg catagttttc aaaataactt
      841 atctactcaa gatccaccaa atgaaacaat gtttgtttgg aacaagtttt taactaccat
      901 gatccagaat cagcttcgga ataatctttg gactgtacaa cttgtttatg gctacttcaa
      961 acaggtttca ctttcaatag ctgaaaagga cttcaagctg accctaattg ctagacgctc
     1021 acgccattat gctggaacca gatatttaaa acgaggggta aatgagaagg gacgtgtggc
     1081 caatgatgtt gagacagaac agattgtatt tgaagatgtt ccagaaggat gtcctgtgca
     1141 aattagctct gttgtccaac atcggggttc gataccgctg ttttggtccc aggaaacttc
     1201 acgattgaat attaaacctg atataatctt gtctaagaag gaccagaatt atgatgccac
     1261 ccgacttcac tttgagaatc tgaccaaaag atacggaaat ccaattatca tactgaattt
     1321 gatcaagacc aaagaaaagc gaccccgaga atcccttctc cgtatggaat ttgctcatgc
     1381 tattgagtca attaataaag atttgcctgc ggaaaatcgt ttgaagttcc ttcattggga
     1441 tttaaacaaa tattctagaa acaagtctac taatgtgttg gcactcttgg gcaaggtagc
     1501 aacttatgca ttgaatttaa ctggcttctt ttactgtcaa gtgataccaa attcgaagtc
     1561 ccaagaccat cagaaccttt ccagtggtgg cgagagtggg aatattaatg taaagcctac
     1621 taaacaacaa acaggggtcc taagaacaaa ctgcatagat tgtttagatc gcacaaatgt
     1681 tgctcaatat gcatatggtt gggctgcact aggtcgtcaa ctgcaatcta taggatatat
     1741 tgatactccg attattgagc ttgattcaaa tctagcagat tacttgatga gaatttatga
     1801 gagaatgggt gacactctag cattacaata tggtggttct gcagcacaca ataagatatt
     1861 ttgtcaaaga agaggtcaat ggaaggcagc cactcagtcc caggaattat ttagaactct
     1921 acaacgttac tatagtaatg cttacatgga tgctgagaag caagatgcca ttaacgtgtt
     1981 cctaggtcac tatcagccac aaatcggtag acctgcactg tgggaattgg attctgatca
     2041 gcattataat gttggtggcc aaggttctaa tacttatgtg gacagaacta ggattattaa
     2101 aaggtcgttg tcagttggca acattctcta tgatggcaac atcgttcgca acagttctat
     2161 tggaactgct caaaaagatg aagaatcctt gaatgaaaac tctgttgaaa gtgattcatc
     2221 atattcaagg tgtgcaaatt catcgtcagg gccagatctt acgtctgaag agatgcccaa
     2281 cagtgatcgc atattttata acaaagattc tttcaactgc tcaaattttc ttgatgttga
     2341 ttggctatca tcatctggca actcttgtga agacgaaaca tttgaaaggt caacacttgt
     2401 cgggtcccct atcggcggtc agtcatccga ctatgtggtt aatgaaatgt gcactttcgc
     2461 tagtgattct gagatgtctc cctgtgtgca ggatggtaga agccctgttg gaggtgggtt
     2521 ttcggataga tttgccgaat gggtgaccaa tggagataca tttctttgat cagttttgcc
     2581 tacaaaacca gaaaactaaa aaaacaaaaa atcctactta taagtcattg aatttcagtc
     2641 atccgctcct aaaggacgtg ggttgcgaag cagaaataaa tggtaagaga aataccatta
     2701 gagaaaccaa taaagaaaag aaaaaatgaa cctccaattt aattgaagat atataactgg
     2761 ttaaaaagga aagtatgcta acccttgtaa aaataaaaaa tatatattaa aaagcatgca
     2821 ttagacgact attacaagta caaaagagta ttaagctaca gttggttttt catatttcat
     2881 ttgtctgtaa atattttttg atagtgttta cttaagtcgg attggagatt aaacgatgtt
     2941 atttattcct tgttagtaag gtaaaccaga tatttgtgca gcttatatag aatgattttg
     3001 agcctcaaat ttgatataac atcaagtaaa cgttgttagt ttctaaattc attgaggggg
     3061 gagggggtgg ttatgattgc ttgtttaaat actccgtaac ttggagcatc tggtgtgggc
     3121 aaggtcac
//
LOCUS       XM_071885877             727 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903946), mRNA.
ACCESSION   XM_071885877
VERSION     XM_071885877.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..727
                     /gene="LOC139903946"
                     /note="uncharacterized LOC139903946; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903946"
     CDS             92..445
                     /gene="LOC139903946"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741978.1"
                     /db_xref="GeneID:139903946"
                     /translation="MATSITSSSFLFHHAPNPIKKTSRSVVMFANKDSQSPSSSLNRV
                     GSSIKIQKVFEDKSRGIVCYLDDKGEITCEGFDEGPRLHQGVSMVSCYQGVDQGIIDL
                     LKRSLLQVKEGGKFN"
ORIGIN      
        1 ctaatatata atagaagcca ataacatacc ttttttcttc ctaacactct catttgtttc
       61 aataatttct agtttcttaa cagtaaatga tatggcaaca agcattactt catcatcctt
      121 cttattccat catgctccaa accccatcaa gaaaacatca agaagtgtag taatgtttgc
      181 aaataaagat tcccaaagcc catcttcatc tctcaatcgg gtcggatcat ccatcaagat
      241 acaaaaggtt tttgaagata aaagtagagg tatagtatgt tatttagatg ataaaggaga
      301 gataacatgt gaaggatttg atgaaggacc tcgccttcat caaggcgttt caatggtctc
      361 ttgttatcaa ggagttgacc aaggcataat tgatctactc aagagaagcc tgcttcaagt
      421 taaagaaggt ggtaaattca actaattatg gttggcagaa cataattcta actcatctat
      481 acattaagat atataaatat atgaagatgg tgggagaacc catgttactt aaactgttaa
      541 ataattgatg acatgaagaa aacagacacg ccctgtatat atttttatgc acacaggaat
      601 tcatacatca ttaaaaggtt gtatatgtgt atgtgtctgt ttctacattt gcttgatgta
      661 gttgtgagtt tgtgtatatg tgtctgtttc tacattcaat gataatgaaa tataactcgc
      721 tgtttct
//
LOCUS       XR_011778600            1186 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903947), transcript variant X1, ncRNA.
ACCESSION   XR_011778600
VERSION     XR_011778600.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1186
                     /gene="LOC139903947"
                     /note="uncharacterized LOC139903947; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903947"
     ncRNA           1..1186
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903947"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139903947"
ORIGIN      
        1 tacttcgtca attcccaggc caattgcatc aacatgtact ttctctgctc ctttaactct
       61 tcagtggatg caattttcgt atcacgaaag agctaaagct ttggaggtgg ttcaatactt
      121 caaagaatat aaaaacaagg ggaacttgac atggtagcag taagtttata tacttttcaa
      181 ataccgtatc ttgaaactca tgacttcttg caaccacttg aacgcgtcag taaaagcgtt
      241 gctaacgaat gaaataaact cgaagaacca gctactgcaa tcgaacacat tcttcctaat
      301 gggattggga cttatagtat tagtcaagtt tcttgtattg gtcaaagtca aaggatgcca
      361 aaggcggagg gggtcgtaat cactgctgca caatctactg gtcgtgataa aaattcaaat
      421 gacagttctt gtactgggag tggtttctca ctttgggaaa agtctcctcc acatacacgt
      481 aaggaatatt acatataagc caactcataa gctacaacta tttaaaagtt actatttctt
      541 tatttcgatg ttgccttttt gattaagtag atataattta ctaataaccc gaccaaagtg
      601 ttgaggttgt tgaacagagc ggtactccaa atgaagacta cattggctgc gtccaaaatg
      661 ttgtaggtgt taagcagagc ggtactccaa atgaagacct aaaagaacgg cgatcaattt
      721 acatcattaa ttcaaatgac aacactgtac aactaacttt gttgaacgag caagctactg
      781 acttcgacgt ggaagcttac aatgcgcaac aataacctat aatcatcgcc acaagtgcct
      841 gctgggtaaa agaaaacaaa tgtaagtttc cacgaatagc acttagagga ctgtatgtat
      901 aacttagtgt tttagttttt tcaaagttat gagattgaac attagtttag cttttgacca
      961 aaattgtcaa aatgacattt ttttggaaat gtgagaaatg gaattgtagt gtgatccact
     1021 cttattcgta tcatctaatg tgaaggctct aaaatacata ttttggtagt tgtgaattgt
     1081 ttctggacag aatgacttgc aactgaatgt ggagctcagt attggattta caactttcac
     1141 tttgataagt caaacatgaa tgtgttgcat cccgtaacat attgca
//
LOCUS       XR_011778601            1066 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903947), transcript variant X2, ncRNA.
ACCESSION   XR_011778601
VERSION     XR_011778601.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1066
                     /gene="LOC139903947"
                     /note="uncharacterized LOC139903947; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903947"
     ncRNA           1..1066
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903947"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139903947"
ORIGIN      
        1 tacttcgtca attcccaggc caattgcatc aacatgtact ttctctgctc ctttaactct
       61 tcagtggatg caattttcgt atcacgaaag agctaaagct ttggaggtgg ttcaatactt
      121 caaagaatat aaaaacaagg ggaacttgac atggtagcag taagtttata tacttttcaa
      181 ataccgtatc ttgaaactca tgacttcttg caaccacttg aacgcgtcag taaaagcgtt
      241 gctaacgaat gaaataaact cgaagaacca gctactgcaa tcgaacacat tcttcctaat
      301 gggattggga cttatagtat tagtcaagtt tcttgtattg gtcaaagtca aaggatgcca
      361 aaggcggagg gggtcgtaat cactgctgca caatctactg gtcgtgataa aaattcaaat
      421 gacagttctt gtactgggag tggtttctca ctttgggaaa agtctcctcc acatacactg
      481 ttgaggttgt tgaacagagc ggtactccaa atgaagacta cattggctgc gtccaaaatg
      541 ttgtaggtgt taagcagagc ggtactccaa atgaagacct aaaagaacgg cgatcaattt
      601 acatcattaa ttcaaatgac aacactgtac aactaacttt gttgaacgag caagctactg
      661 acttcgacgt ggaagcttac aatgcgcaac aataacctat aatcatcgcc acaagtgcct
      721 gctgggtaaa agaaaacaaa tgtaagtttc cacgaatagc acttagagga ctgtatgtat
      781 aacttagtgt tttagttttt tcaaagttat gagattgaac attagtttag cttttgacca
      841 aaattgtcaa aatgacattt ttttggaaat gtgagaaatg gaattgtagt gtgatccact
      901 cttattcgta tcatctaatg tgaaggctct aaaatacata ttttggtagt tgtgaattgt
      961 ttctggacag aatgacttgc aactgaatgt ggagctcagt attggattta caactttcac
     1021 tttgataagt caaacatgaa tgtgttgcat cccgtaacat attgca
//
LOCUS       XM_071885878            2054 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pectinesterase 1
            (LOC139903948), mRNA.
ACCESSION   XM_071885878
VERSION     XM_071885878.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2054
                     /gene="LOC139903948"
                     /note="pectinesterase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139903948"
     CDS             137..1873
                     /gene="LOC139903948"
                     /codon_start=1
                     /product="pectinesterase 1"
                     /protein_id="XP_071741979.1"
                     /db_xref="GeneID:139903948"
                     /translation="MDTIKSFKGYGKVDPVEEQAFRRKTRKRLTILIVSVVLLLAVII
                     GAVAGTLIHNRNKNSNPNSQSSQLSSSQSIKAVCSQTLYPESCYTSISDLNKSNSTDP
                     EELLKLSLQAVLNALSDVATLPKRLSDATSDDTVKKALDVCQNVLDDAVDYVKDSISS
                     MDVKSGEKLLNVTKIDDLKTWLSTTITNQETCLDALQEINSTSVNDVTSQMKNSSEYS
                     SNSLAIVSKISGILGKLNFPIHRKLLSESEPEFPGWVSPSVRKLLQAARPVPNVTVAV
                     DGTGDVKTIKEAMARVPKKSKTMFVIHIKAGKYLENVVLDKSFWNVMIYGDGKDKTII
                     SASLNFIDGTPTFSTATFAVAGKGFIAMDIRFENTAGAAKHQAVAFRSGSDFSVFYRC
                     SFDAFQDTLYPHSNRQFYRECDVTGTIDFIFGNAAVVFQSCKIMPRQPLSNQFVTITA
                     QGKKDPNQNTGISIQKCDLSAFDKLTAPTYLGRPWKEYSTTVIMQSTIGGFLNPVGWI
                     SWVQGVDPPASIFYGEYMNTGAGAGVSQRVKWAGYKPSLTTADANKFTVESFIEGSMW
                     LPQTSVAFDSAL"
     misc_feature    137..1870
                     /gene="LOC139903948"
                     /note="pectinesterase; Region: PLN02314"
                     /db_xref="CDD:215179"
ORIGIN      
        1 aacacaaaat acaccaataa gtccaaaaca ttatcattat cataatcata atttataaat
       61 cttcacactc cagaaactca tttatttcat aaacttgtac taactagttc atatcaaact
      121 caatattcaa ttattcatgg atacaatcaa atctttcaaa ggctacggta aagtcgatcc
      181 agtcgaagaa caagcatttc gtcgtaaaac acgaaaacgt ctaacgatct taatcgtttc
      241 agtcgtgtta ctactcgcag tcataatagg agctgttgca ggtacattga tacacaaccg
      301 taacaaaaac tcaaacccta attctcaatc ttcacagtta tcatcgtcac aatcaattaa
      361 agctgtttgt agtcaaactc tataccccga gtcatgttac acgagtattt cggatcttaa
      421 taagtccaac tcaaccgacc cggaagagct acttaaactt tcattacaag cggttctcaa
      481 tgcgttgtct gacgtggcaa cattgcctaa aaggttgtcg gatgcaacaa gtgatgacac
      541 cgttaaaaaa gcgttagatg tttgtcagaa cgttctagat gacgccgttg attacgttaa
      601 agattcgatt tcatcaatgg atgtgaaatc gggtgagaag ttacttaatg tgacaaaaat
      661 tgatgatctg aaaacttggt taagtacaac gatcacgaat caagaaacat gtttggatgc
      721 tttacaagaa attaattcaa caagtgtgaa cgatgtgacg tcacaaatga aaaattcgag
      781 tgaatattcg agtaatagtt tagctattgt gtctaaaata tccgggattt taggaaaatt
      841 gaattttccg attcatcgga aactgttgtc ggaaagtgaa ccggagtttc cgggttgggt
      901 gagtcctagt gttaggaagt tgcttcaagc ggctcgaccg gtgcctaatg tgacggtagc
      961 cgttgacggg accggagatg tgaaaacgat taaagaagcg atggctaggg ttccgaaaaa
     1021 gagcaaaaca atgtttgtga ttcatattaa agctggaaag tatttggaaa atgtcgtttt
     1081 ggataaatcg ttttggaatg ttatgatcta cggcgacggt aaagataaaa cgatcatttc
     1141 tgctagcctg aatttcatcg acggcacgcc gaccttttcg acggcgactt ttgctgttgc
     1201 tggaaagggc tttatagcaa tggacatccg gttcgagaac acggccggtg cagccaagca
     1261 ccaagccgtg gcattcaggt cgggttcaga tttttcggtc ttttacagat gttcgtttga
     1321 tgctttccaa gacactcttt atccgcattc aaaccgccaa ttctatagag aatgtgatgt
     1381 cactggaacc attgatttca tctttggaaa cgcggctgta gttttccaaa gctgtaagat
     1441 tatgccacgt cagcctttat cgaaccaatt tgtaaccata acggctcaag gaaagaagga
     1501 cccgaatcaa aacacgggta tttcaattca aaaatgtgat cttagcgcgt ttgataagct
     1561 tacagctcca acatacttgg gtagaccatg gaaagaatat tctacaacag tcatcatgca
     1621 atctactatt ggaggctttt tgaacccagt gggctggatt tcatgggtcc aaggtgttga
     1681 cccaccagca tctatattct atggtgagta catgaacacg ggcgcaggcg ctggtgttag
     1741 tcagcgggtt aaatgggctg ggtataagcc cagcctaaca acagctgacg ctaataagtt
     1801 tacagtggag tcgttcattg agggctcaat gtggctacca caaaccagtg tggcgtttga
     1861 ttcagcttta tgagtattaa aagaggcgtt gcatacatgg atgtttaaag ggtgttattt
     1921 tccctatctt tttctttaag atagtttgta atgcatcata ttctaacaca gttaccgtta
     1981 tttttatatt tatacttatc agagatttgt atttaatcaa aatctgtgtt gacatcaatc
     2041 gatgctttgt tttc
//
LOCUS       XM_071885879            1705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pectinesterase-like
            (LOC139903949), mRNA.
ACCESSION   XM_071885879
VERSION     XM_071885879.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1705
                     /gene="LOC139903949"
                     /note="pectinesterase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 69
                     Proteins"
                     /db_xref="GeneID:139903949"
     CDS             20..1705
                     /gene="LOC139903949"
                     /codon_start=1
                     /product="pectinesterase-like"
                     /protein_id="XP_071741980.1"
                     /db_xref="GeneID:139903949"
                     /translation="MQHSNYNKNICFIVFTSILFVNISIEVGVNSHSHSADIQHSKTH
                     NIVKSSCSVTLHPDLCYTTISGIPDVTKMVTSQKDVIELAVNKTKEIIKRNYFTIKKI
                     ILRTGFTKREKIALHDCLEMVADTLEEIDQVEIFLKTYPTKKGFRKHVDDMMTLMSTA
                     LTNQYTCIDGFSHDKHDKKVRGSLIAGEVHAQKLCSNSLAMIKNMTMTDLANEVETNA
                     TKNLDENEDVEWPEWLSTGDRKLLQSGTVTPNVVVAADGSGDFTTVSAAVAAAPSSSS
                     TRYVIRIAPGVYKENVNIPSGKRNLMFLGSGRTTTIITGSRSVAGGSTTFNSATVAAV
                     GDGFLARDITFQNTAGPSGHQAVAIRVGSDLSAFYKCDMIAYQDTLYVHSNRQFYVNC
                     FISSTVDFIFGNAAVVFQDCDIQARRPNPNQKNMVTAQGRTDPNQNTGIVIQKSRIGA
                     TSDLQAVLGSFPTYLGRPWKQYSRTVVMQSTISNVINPAGWFPWDGNFALDTLYYGEY
                     QNTGAGASTANRVTWPGYRVIKSATVAQGFTPGNFIGGGSWLGATGFPFSLGL"
     misc_feature    29..1702
                     /gene="LOC139903949"
                     /note="Pectinesterase/pectinesterase inhibitor; Region:
                     PLN02313"
                     /db_xref="CDD:177947"
ORIGIN      
        1 caaacaactc ttacccggaa tgcaacattc caactacaac aaaaacatct gtttcatagt
       61 tttcacttca atcctgtttg tgaatatcag cattgaggtg ggagttaact cccactcaca
      121 cagtgccgat atccaacatt cgaaaactca caacatcgtg aaatcatcgt gtagtgttac
      181 gctccacccc gatttatgtt acaccacaat ttcgggcatc cccgatgtaa ccaaaatggt
      241 gacatctcaa aaagatgtca tagaacttgc ggttaataaa acgaaagaga tcattaagcg
      301 aaactacttt actataaaga agattattct aaggaccgga ttcacgaaac gtgagaaaat
      361 cgcgctacat gattgtctag aaatggttgc tgacacgctt gaagaaatag atcaagtcga
      421 aattttcctt aaaacatacc ctacaaaaaa agggtttcgc aaacacgtcg acgatatgat
      481 gacactaatg agcacggcct taactaatca gtatacgtgt atagacgggt tctcacacga
      541 caaacacgac aagaaagtgc gcggatcgct gattgcagga gaggttcacg cccaaaagtt
      601 gtgtagtaac tcattggcca tgatcaagaa tatgacaatg acagatttag ccaacgaggt
      661 cgaaactaac gccacgaaga atttagatga aaatgaggac gtagaatggc ccgaatggtt
      721 gtcaacaggg gacagaaagt tgttacaatc ggggactgtg acaccgaatg tggttgtggc
      781 agcagatggc agtggggact ttacaacagt ttctgctgca gttgctgctg ctccgtcttc
      841 aagctcgact aggtacgtaa ttaggatcgc gcctggggta tataaggaaa atgtgaatat
      901 tccgtctggt aaacggaatt tgatgttttt aggatctgga agaacaacca cgattatcac
      961 cggaagccga agtgtcgctg gaggtagcac caccttcaat tccgcaactg tcgccgctgt
     1021 gggggatgga tttcttgcac gagatataac atttcaaaac acagctggac catctgggca
     1081 ccaagcggtg gcaatacggg tcgggtcaga tctatctgca ttctacaaat gtgacatgat
     1141 agcataccaa gacacgcttt acgtccactc caaccgtcaa ttctacgtca actgtttcat
     1201 atccagcaca gttgacttca ttttcggcaa tgcagcagtc gtgtttcaag attgtgacat
     1261 tcaagctcgt cgacccaacc caaaccaaaa aaacatggtc acagctcaag gtcgaaccga
     1321 cccaaaccaa aacacaggaa tcgtgatcca aaaatcaaga attggagcca cgtcggacct
     1381 tcaagccgtc cttggaagtt ttccaacgta tctgggcagg ccttggaagc aatactcgag
     1441 aacggttgtt atgcaatcga cgataagtaa tgttataaat ccggctggat ggtttccctg
     1501 ggacgggaat tttgcgcttg atacgttgta ttatggagag tatcaaaaca cgggtgcggg
     1561 tgcaagtacc gcgaacagag tgacgtggcc cgggtataga gtgattaaga gtgctactgt
     1621 tgctcaaggt tttactcctg gaaattttat cggtggcggc agttggttag gagctactgg
     1681 tttcccgttc tctttagggc tataa
//
LOCUS       XM_071885880            1082 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RING-H2 finger protein
            ATL64-like (LOC139903950), mRNA.
ACCESSION   XM_071885880
VERSION     XM_071885880.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1082
                     /gene="LOC139903950"
                     /note="RING-H2 finger protein ATL64-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139903950"
     CDS             74..787
                     /gene="LOC139903950"
                     /codon_start=1
                     /product="RING-H2 finger protein ATL64-like"
                     /protein_id="XP_071741981.1"
                     /db_xref="GeneID:139903950"
                     /translation="MVDSNVHDSSTVNVESNIMMMSIIAFFIAIVFCFLLYYFSKRGI
                     QTTPRESNNPVSEQKRGLDALFLDKIKVIEYDPNEFKGGLECAVCLSDVEKGEKARIL
                     PKCDHGFHLECIDTWFLSHTTCPICRNAVNDQMELVLELEQEDLIHVLLEEDEDNHHH
                     QDSASEQESSSTSSSSSMKNGEKPDLVIDIPRRDVLEEEEEKTPVSSSRMRSLRRMLS
                     GSSRFNPFSPSSESQVKTQ"
     misc_feature    326..457
                     /gene="LOC139903950"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins; Region:
                     RING-H2_EL5-like; cd16461"
                     /db_xref="CDD:438124"
     misc_feature    410..427
                     /gene="LOC139903950"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
ORIGIN      
        1 tcaactttct ttacttcaaa cataacaaaa agaaaaacaa attgaaccat aaaaaaacct
       61 cctaaaagta tagatggttg atagtaatgt tcatgattct agtaccgtga atgtagaaag
      121 caacattatg atgatgtcca tcatagcttt cttcatcgcc atcgtatttt gtttccttct
      181 ttattacttc tcaaagcgtg ggatacaaac aacgcctcga gaatccaata atcctgtaag
      241 cgaacaaaaa cgcggactag atgctttgtt cttggacaag ataaaggtca ttgaatatga
      301 cccaaatgag tttaaaggcg gtttggaatg tgcggtttgt ttatccgatg tggagaaagg
      361 agagaaagct agaattttgc ctaaatgtga tcatgggttc catttagaat gcattgatac
      421 gtggttcctt tcgcatacca cttgtcccat atgtagaaac gccgttaatg atcaaatgga
      481 actcgtccta gaactagaac aagaagattt aatacatgtt ttgttggagg aagatgaaga
      541 taatcatcat catcaagatt cggcttcaga acaagaatca tcatcaacat cgtcatcatc
      601 atcaatgaag aatggagaaa agccggattt ggtaatagat ataccacgaa gggatgtgct
      661 tgaggaagaa gaagagaaaa ctccggtttc tagttcaaga atgagatcgt taaggagaat
      721 gctaagcggt agctcgaggt ttaatccttt tagtccaagc tcggaatcac aagttaaaac
      781 gcaataagta aataagatgt tgctttaata agaaaaatcc caaacaccct cgactcctag
      841 agttgcatat gcgcgcgact cgtaaagtca tttgttatca tagtgtaaat taagttatct
      901 tttcattagt cttatgaata tgaattatga acttgcattg cacatcacac attgtgacca
      961 ataagatgga tatttgtttg aaaataaaat aggatcagac tcattcaagg tctcctattt
     1021 ttgaccgaag ttttggacct tgtgtggtca gtttggagtt tggaccatat acaacttggc
     1081 ta
//
LOCUS       XM_071885881            1891 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903951), mRNA.
ACCESSION   XM_071885881
VERSION     XM_071885881.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1891
                     /gene="LOC139903951"
                     /note="uncharacterized LOC139903951; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139903951"
     CDS             191..1762
                     /gene="LOC139903951"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741982.1"
                     /db_xref="GeneID:139903951"
                     /translation="MPLLDIATPQSSFRNNLYSIGLFQRIHHVSFISGDSKTARWKYF
                     CNPAIVPMNCGRLMIKAVATLEPMCSDNAQKLRVNSSGKTLPAADSGELTPPVQDEKE
                     LLRRNRISKANKGREAWNKGRKHSPETRQKIRERTRLAMRSPKVKMKLLKGIHNQTRE
                     TREKIAAAVRLTWDKRRSHRRMVARCHREWLTLISEASRKGLAGEEELQWDSYEIISK
                     QLYKEFREGIESRKKRSTPGVRAPKTLEQRRKISEAIAAKWADPAYRDRVYSGIAKHR
                     GKDPEPRDPEWGTKRKEPRKVKPVKSIRVKSQQPRSKTSSSPVQKETQPRFKDPQARY
                     KLEMIKSIRAQRAASDPKISEAILRANILIGEAQRAAEALEAAAAKSPMAEASLVETR
                     KLIAEAISYIKSIETDNSGTPGASFDKEEIVAGVKDTEQKGVNGVATIGLGAAEFEKF
                     GDLGLEANGTERVDLSTMSLSSSPSTSSSWSDLSLPVKKEETNGEKQEKGGKGRRWVC
                     GRLVEDEDEDECEEL"
     misc_feature    <506..592
                     /gene="LOC139903951"
                     /note="NUMOD3 motif; Region: NUMOD3; pfam07460"
                     /db_xref="CDD:429472"
     polyA_site      1891
                     /gene="LOC139903951"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgaaatatcg ttatcttttg tttctgcttc acaggggtgt ggtgtgtgac tgtggctatc
       61 tcctccctcc ccattctccc atccttcacc ctgaaaaccc taaccctaaa cttttatgga
      121 accccaacat acacaataat tgcatacaga caggctattt gaattcgttt cctgactgaa
      181 tgacctcctc atgcctttat tagatattgc tactccacaa tcttcgttca ggaacaacct
      241 gtattcgatt ggattatttc aaagaattca tcatgtttca tttatatctg gcgattcaaa
      301 aaccgccaga tggaagtact tttgtaatcc ggctattgtt ccgatgaatt gtggccgtct
      361 tatgattaag gcagttgcta cacttgaacc tatgtgttct gataatgcgc aaaagcttcg
      421 agtgaattcc agtggaaaaa cattaccggc agctgacagt ggtgaactaa cacccccggt
      481 tcaagacgaa aaggagttgt tgagacgaaa taggatttcg aaagcgaata aaggcagaga
      541 agcatggaat aaagggagaa agcatagtcc tgaaactaga cagaagatac gtgagagaac
      601 gagacttgct atgcgtagtc ctaaggtcaa gatgaaactg cttaagggaa tacataatca
      661 aactcgtgag acaagagaaa agattgcagc tgcagtgcgg cttacatggg ataagcggcg
      721 ttcccaccgc aggatggtag cacgttgcca tcgtgagtgg cttaccttaa tttcagaagc
      781 ttctagaaag gggctagctg gtgaggaaga gctgcagtgg gactcgtatg agataattag
      841 caagcagctt tacaaggaat ttcgagaggg tattgaatca agaaagaaaa ggtccacccc
      901 aggggtccga gctcctaaaa cccttgagca aagaaggaaa atttcagaag ccattgctgc
      961 caaatgggcc gacccagcat atcgtgatcg ggtgtacagt ggcatagcta aacatcgtgg
     1021 caaagatccg gagcctagag atccagaatg gggaaccaag agaaaggaac caagaaaggt
     1081 caaacctgtg aagagtataa gggtcaaaag tcaacagcct agatcaaaaa caagtagcag
     1141 tcctgtacaa aaggaaacac aacctcgatt caaggatcca caagcgagat acaagttaga
     1201 gatgataaag agtatcagag cacagagagc agcttcagat cctaaaataa gcgaagctat
     1261 tctaagagcc aatattttga ttggtgaagc ccagagagct gcagaggcat tagaggcggc
     1321 tgcagcaaag agtccaatgg ctgaagcttc attggtagaa acaaggaagt tgattgctga
     1381 agcaattagc tatatcaagt ctatagagac ggataatagt ggaactccag gggctagttt
     1441 tgacaaggag gagatagtag caggtgttaa ggatacagaa caaaaaggtg tgaatggagt
     1501 ggcaactata gggttaggtg ctgctgaatt tgaaaagttt ggtgatttgg gtcttgaggc
     1561 gaacggaact gagcgtgttg atctgtcaac aatgtcatta tcatcttctc cttcgacatc
     1621 atcatcatgg agtgatttga gtttgccggt gaaaaaagag gaaacaaatg gtgagaaaca
     1681 ggaaaaaggt ggcaaaggta gacgatgggt ttgtggaagg ctggttgaag atgaagatga
     1741 ggatgaatgt gaggagttgt agaattagta gcagcggtag taattgttgt ttgttgaagt
     1801 ataaagtaaa actagacaaa aagcatgtaa tacaggtgcc gcatgttttt tcttttttga
     1861 tccatttcta tgacaaacca tctttatagt a
//
LOCUS       XM_071885882             844 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903953), transcript variant X1, mRNA.
ACCESSION   XM_071885882
VERSION     XM_071885882.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..844
                     /gene="LOC139903953"
                     /note="uncharacterized LOC139903953; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903953"
     CDS             60..830
                     /gene="LOC139903953"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071741983.1"
                     /db_xref="GeneID:139903953"
                     /translation="MRARLLVFPIKGRNWCFIRSIDRATSQSQSSQTPSTFKHLWQQI
                     SSSSHKATAANVELCIDFAANKMNKAWSGLEKAPEGSFKNKIHSLGLKLLSRVKPSEI
                     FLKSIPKQLSSVEVVFPVRGTIIHKNYFYGSVTLLPVTSAFAVLPLPNVPFFWILFRT
                     YSHWRALKGSEKLLELVSDSSKRLNSPESGQEKEAAENDSEKINHTSIDPPLIMQASE
                     ELERLIGDENEVSKCKLKDICNVFDLNTMDVLKYQHLK"
     misc_feature    72..590
                     /gene="LOC139903953"
                     /note="Mitochondrial K+-H+ exchange-related; Region:
                     Mit_KHE1; pfam10173"
                     /db_xref="CDD:431110"
ORIGIN      
        1 caccattcaa ccgtttgatt taattcctta agaactcact aaatcacata aaaaaaaaaa
       61 tgagagctag gcttttagtg ttcccaatta aaggaagaaa ttggtgtttt atcagatcga
      121 ttgaccgggc aacctcacaa tctcaatctt cacaaacccc atccacattc aaacacctat
      181 ggcaacaaat ttcttcatct tcacacaaag caaccgctgc taatgttgaa ctctgtattg
      241 atttcgcagc taataagatg aataaagcat ggtcaggttt ggagaaagca cctgaaggaa
      301 gctttaagaa taagattcat agtttgggct taaaactttt gtcacgtgtt aagccttctg
      361 agatattttt aaaatcgatc ccgaagcagt taagcagtgt ggaggttgtt tttccagtaa
      421 gggggactat tattcacaag aattactttt atggatcagt tactctgctc ccagttacat
      481 ctgcttttgc cgtgttgcct ttgccgaatg taccattttt ttggatctta tttcgcacct
      541 attcgcactg gagggctctc aagggaagtg agaagcttct tgagctggta tcagattctt
      601 caaagcgttt gaactctcct gagagtggcc aagagaaaga agccgcagaa aacgactcgg
      661 agaaaataaa ccacacatca atcgatcctc cactgataat gcaagcctca gaggagcttg
      721 agagacttat tggagatgaa aatgaagtta gcaagtgcaa attaaaagac atttgcaacg
      781 tcttcgattt gaacacgatg gatgtgctaa aataccaaca tctaaagtag ctccacattt
      841 tttt
//
LOCUS       XM_071885883             892 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903953), transcript variant X2, mRNA.
ACCESSION   XM_071885883
VERSION     XM_071885883.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..892
                     /gene="LOC139903953"
                     /note="uncharacterized LOC139903953; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139903953"
     CDS             60..878
                     /gene="LOC139903953"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071741984.1"
                     /db_xref="GeneID:139903953"
                     /translation="MRARLLVFPIKGRNWCFIRSIDRATSQSQSSQTPSTFKHLWQQI
                     SSSSHKATAANVELCIDFAANKMNKAWSGLEKAPEGSFKNKIHSLGLKLLSRVKPSEI
                     FLKSIPKQLSSVEVVFPVSLNARLVRRRLRHIAMRGTIIHKNYFYGSVTLLPVTSAFA
                     VLPLPNVPFFWILFRTYSHWRALKGSEKLLELVSDSSKRLNSPESGQEKEAAENDSEK
                     INHTSIDPPLIMQASEELERLIGDENEVSKCKLKDICNVFDLNTMDVLKYQHLK"
     misc_feature    72..638
                     /gene="LOC139903953"
                     /note="Mitochondrial K+-H+ exchange-related; Region:
                     Mit_KHE1; pfam10173"
                     /db_xref="CDD:431110"
ORIGIN      
        1 caccattcaa ccgtttgatt taattcctta agaactcact aaatcacata aaaaaaaaaa
       61 tgagagctag gcttttagtg ttcccaatta aaggaagaaa ttggtgtttt atcagatcga
      121 ttgaccgggc aacctcacaa tctcaatctt cacaaacccc atccacattc aaacacctat
      181 ggcaacaaat ttcttcatct tcacacaaag caaccgctgc taatgttgaa ctctgtattg
      241 atttcgcagc taataagatg aataaagcat ggtcaggttt ggagaaagca cctgaaggaa
      301 gctttaagaa taagattcat agtttgggct taaaactttt gtcacgtgtt aagccttctg
      361 agatattttt aaaatcgatc ccgaagcagt taagcagtgt ggaggttgtt tttccagtaa
      421 gcttaaatgc aaggcttgtt cggcgaagat taaggcacat tgctatgagg gggactatta
      481 ttcacaagaa ttacttttat ggatcagtta ctctgctccc agttacatct gcttttgccg
      541 tgttgccttt gccgaatgta ccattttttt ggatcttatt tcgcacctat tcgcactgga
      601 gggctctcaa gggaagtgag aagcttcttg agctggtatc agattcttca aagcgtttga
      661 actctcctga gagtggccaa gagaaagaag ccgcagaaaa cgactcggag aaaataaacc
      721 acacatcaat cgatcctcca ctgataatgc aagcctcaga ggagcttgag agacttattg
      781 gagatgaaaa tgaagttagc aagtgcaaat taaaagacat ttgcaacgtc ttcgatttga
      841 acacgatgga tgtgctaaaa taccaacatc taaagtagct ccacattttt tt
//
LOCUS       XM_071885885            1453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome regulatory
            subunit 7 homolog A-like (LOC139903954), mRNA.
ACCESSION   XM_071885885
VERSION     XM_071885885.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1453
                     /gene="LOC139903954"
                     /note="26S proteasome regulatory subunit 7 homolog A-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 64 Proteins"
                     /db_xref="GeneID:139903954"
     CDS             62..1342
                     /gene="LOC139903954"
                     /codon_start=1
                     /product="26S proteasome regulatory subunit 7 homolog
                     A-like"
                     /protein_id="XP_071741986.1"
                     /db_xref="GeneID:139903954"
                     /translation="MPSDIEDEIKDDKNPKPLDEDDIALLKTYGSGPYSISIKKAEKD
                     VKDKAKRINNLCGIKESDTGLVAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNTEDA
                     KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMTVE
                     EKPDVTYNDVGGCKEQIEKMREVVELPMLHPERFVQLGIDPPKGVLCYGPPGTGKTLL
                     ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA
                     RFDDGAGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV
                     EFGLPDMESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRA
                     RRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN"
     misc_feature    398..1330
                     /gene="LOC139903954"
                     /note="proteasome-activating nucleotidase; Provisional;
                     Region: PRK03992"
                     /db_xref="CDD:179699"
ORIGIN      
        1 gaaaactatt gttccttgta caccttccat ctccggcgac aaaaaaactc ctaaaatcaa
       61 aatgccgagt gacattgaag acgagatcaa ggacgataag aaccctaaac ctctcgatga
      121 agatgatatt gcccttctca aaacttacgg atcgggacct tattccatca gcatcaagaa
      181 ggctgaaaag gatgtaaagg acaaggccaa aaggattaat aatttatgtg gtattaaaga
      241 atcggacacc ggtttagttg cacctagcca gtgggatctt gtttctgata aacaaatgat
      301 gcaagaagaa caacctcttc aggttgctag gtgcacaaag ataattaatc caaacacaga
      361 agatgcaaaa tacgttatta atgtcaaaca aattgcaaag tttgttgtcg ggttgggtga
      421 caaagtttcg cctactgata ttgaagaagg catgcgtgtt ggtgttgatc gaactaaata
      481 tcagattcag attccattgc ctccgaagat cgatcctagt gtgacgatga tgacggtgga
      541 agaaaaacca gatgtgacgt ataatgatgt cggtggatgt aaggagcaga tcgagaagat
      601 gcgagaggtt gttgaactac ctatgctgca cccagagaga tttgttcaac ttggaatcga
      661 tcctccgaaa ggtgttcttt gctatggtcc acctggaact ggcaaaacac ttttagctag
      721 agccgttgcc aatagaacag atgcatgctt tatacgtgta attggaagtg aattggttca
      781 gaagtatgtt ggtgaaggtg ctcgcatggt tcgcgaacta tttcagatgg cccgctcaaa
      841 aaaggcctgc atcgttttct ttgatgaggt tgatgcaatt ggtggtgccc gttttgacga
      901 tggtgctggt ggagataacg aggttcaaag aactatgctt gaaatcgtta atcaacttga
      961 cgggtttgat gctcgtggta atatcaaagt tcttatggcc acaaatagac cagatacact
     1021 ggaccctgca ctgttacgac ctggaagatt ggaccgtaaa gtagagtttg gattacccga
     1081 tatggaaagc aggacacaaa ttttcaagat ccatacacga acaatgaact gtgaaaggga
     1141 tatccgattt gaacttttgg cccgtctttg ccccaactca actggtgcgg acatcaggag
     1201 tgtgtgcaca gaagcaggaa tgtacgcaat tagagcacgc agaaaaacag taaccgagaa
     1261 agacttcctt gatgcagtaa acaaggtgat caagggatac cagaagttca gtgctactcc
     1321 aaaatacatg gtttataact gagtctgatt tcatgatcat caaagtttgt ttgatactta
     1381 ttctaattat tttaattgtt tccttaattt gtaagaagat aatctttctg taccaacttt
     1441 tgatgacaat gaa
//
LOCUS       XM_071885886            1651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitogen-activated protein
            kinase kinase 5-like (LOC139903955), mRNA.
ACCESSION   XM_071885886
VERSION     XM_071885886.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1651
                     /gene="LOC139903955"
                     /note="mitogen-activated protein kinase kinase 5-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 25 Proteins"
                     /db_xref="GeneID:139903955"
     CDS             271..1353
                     /gene="LOC139903955"
                     /codon_start=1
                     /product="mitogen-activated protein kinase kinase 5-like"
                     /protein_id="XP_071741987.1"
                     /db_xref="GeneID:139903955"
                     /translation="MKPIQPPAVVAGPNRNINRQRRRPDLTLPLPPPQIAVPLPLPPS
                     SAPTSTSQNISTAKQQPFSLSELDRMNRIGSGRGGTVYKVLHRPSGRLFALKVIYGNH
                     EDDVRRQICREIEILRDVDNLNIVKCHDMFDHAGEIQVLLEYMDGGSLEGTHISQEAS
                     LADLTRQVLSGIYYLHRRKIVHRDIKPSNLLINSKKQVKIADFGVSRILAQTMDPCNS
                     SVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLM
                     CAICMSQPPEAPATASREFRNFVSCCLQRDPARRWTAAQLLQHPFVTGGSGNRPLINN
                     NNQVHPTHQLLPPPPARPHFSSTSSS"
     misc_feature    271..1317
                     /gene="LOC139903955"
                     /note="mitogen-activated protein kinase kinase;
                     Provisional; Region: PLN00034"
                     /db_xref="CDD:215036"
ORIGIN      
        1 ttcttcctca cttcttccca gaactttctt cctctcttgt ttccctctat attccattgt
       61 tacatatttg atttgatgtt tattgattat caaatgaatg attaaactca aaattcatcg
      121 caaaccctaa ctcttccttg taatagaatt acatcatcct ttgtatttca tctcttcata
      181 ttattatact tgaatataat ctgtatctgt catcctcaat caatcagcta ttcgattgat
      241 tcttgtgcaa aaattgtaat tcaactaatc atgaagccga ttcaaccacc agcagttgtc
      301 gccggaccta atcgtaacat aaaccgtcaa cgccgtcgtc ctgacctaac cctaccttta
      361 cctcctccac aaatcgccgt tcctctacct ctaccaccgt cctccgcccc tacctccacc
      421 tcacaaaaca tctccaccgc taaacaacaa ccgttcagct tatcggaact tgaccggatg
      481 aacagaatcg gtagcggcag aggcggcaca gtctacaaag tcctccaccg tccttccggc
      541 cgactcttcg ctctcaaagt catctacggt aaccacgaag acgacgtccg acgtcagatc
      601 tgtcgtgaaa tcgagatctt acgagatgtc gataacctaa atatcgtgaa atgtcacgat
      661 atgtttgatc acgccggtga gatccaggtc ctacttgaat acatggacgg aggctctcta
      721 gaaggcacgc acatctcaca ggaagcatcg ttagccgatc tgacacgtca ggttctctcc
      781 ggtatctact atcttcatcg ccggaaaatt gttcatcgtg atattaaacc gtcaaatctg
      841 ttaattaatt caaaaaaaca agttaaaatc gctgatttcg gtgtttctag aatactagca
      901 caaactatgg atccgtgcaa ctcatctgtt ggtacaattg cttacatgag tcccgaacgt
      961 ataaacaccg atttaaacca cggtaaatac gacggttacg ctggtgatat atggagttta
     1021 ggtgtaagca ttttagaatt ttatctaggt cggtttccgt ttgcagtagg tagacaaggt
     1081 gattgggcga gtttgatgtg tgcaatttgt atgtcacaac caccagaagc accggctaca
     1141 gcttcacgcg agtttcgcaa tttcgtttcg tgttgtttgc aacgagatcc agctcggcgg
     1201 tggaccgccg cgcagttgtt acagcatccg tttgttactg gcggttctgg taatcgtcct
     1261 ttgattaata ataataatca ggtgcatcct actcatcaat tacttcctcc accaccagct
     1321 cgtcctcatt tttcatctac atcatcatct tgatatttat ttattttgta ctgttgtttt
     1381 tattgtaatt ttgtctttga atttattatt ctccgtacca tttctctgac tatcatttag
     1441 agatgcatga taaatgataa atttgttttt agaaacatga tgaatgatga aattgtaaaa
     1501 gcatactagt atgtttcggc gtattttcac attcatacgt tgccagtgaa cagttgaatc
     1561 aggttatatc gtttcggtct ttgttcgttg gtagctttgt ctcaaaataa ttgttcactt
     1621 tatatacgaa tgcgggttaa aatttgccgt t
//
LOCUS       XM_071885887             722 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903956), mRNA.
ACCESSION   XM_071885887
VERSION     XM_071885887.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..722
                     /gene="LOC139903956"
                     /note="uncharacterized LOC139903956; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903956"
     CDS             7..537
                     /gene="LOC139903956"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741988.1"
                     /db_xref="GeneID:139903956"
                     /translation="MEYASTQGSRSIADRVASLDPPSLIENFKNNHTFKKGGWSGDKA
                     RVNHEKMLKLKEKYPERSDEVIMLEVLGKRRGYRRGVGKTLPGSASTSSSSSTCQTRR
                     PPPPGSENPLLKEAVYDTFAFNNMAIPPQWQSFFPTPNQTQETEGEDEGDDDEDMEES
                     GASQSESDEENEDEAR"
ORIGIN      
        1 gcgaagatgg aatacgccag tacgcagggt agcaggtcaa ttgccgaccg tgtggcctct
       61 ctggatcctc cgagtcttat cgaaaacttc aagaacaacc acacttttaa gaaaggtgga
      121 tggagtgggg ataaagctag ggtgaaccac gaaaaaatgt tgaaattaaa agaaaaatat
      181 ccggaaagga gtgatgaagt cattatgttg gaagttttag gcaaacgtcg cgggtaccgt
      241 cgcggagtgg gtaaaacgtt acccggatcg gctagtacat catcttcatc atcaacttgt
      301 caaacaagac gaccaccacc accgggttcc gaaaacccat tgctaaagga agcggtatac
      361 gatacttttg cctttaacaa tatggcaatc ccgccccaat ggcaatcttt tttcccaacc
      421 cccaatcaaa ctcaagaaac cgaaggtgaa gacgaaggtg atgacgatga agacatggaa
      481 gaaagtggtg cgtctcaaag cgaaagtgat gaagaaaatg aagatgaagc aaggtaagtt
      541 tgtaagtttg tttgctattc ggatttggtt taagtttgta aactttggat aatgttttaa
      601 ggttgtaaac tttgtgtcgg attgtaatct tttagtattc ggattaagtt tgtaacggtt
      661 ggataatgtt tcggacatgt tttaattaat gttgagcttg tgtttgtgaa atatattgtg
      721 tt
//
LOCUS       XM_071885888             584 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903957), mRNA.
ACCESSION   XM_071885888
VERSION     XM_071885888.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..584
                     /gene="LOC139903957"
                     /note="uncharacterized LOC139903957; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139903957"
     CDS             120..383
                     /gene="LOC139903957"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741989.1"
                     /db_xref="GeneID:139903957"
                     /translation="MATKVQRIMTQPINLIFRFLQSKAGIQIWLFEQKDLRIEGRIIG
                     FDEYMNLVLDEAEEVSIKKKTRKPLGRILLKGDNITLMMNSGK"
     misc_feature    135..371
                     /gene="LOC139903957"
                     /note="Sm protein E; Region: Sm_E; cd01718"
                     /db_xref="CDD:212465"
     misc_feature    order(174..176,210..212,216..218,225..227,246..257,
                     267..269,291..293,318..320,324..326,330..344,351..371)
                     /gene="LOC139903957"
                     /note="heptamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:212465"
     misc_feature    order(201..221,225..263,267..281)
                     /gene="LOC139903957"
                     /note="Sm1 motif; other site"
                     /db_xref="CDD:212465"
     misc_feature    order(255..257,261..269,342..344,348..350)
                     /gene="LOC139903957"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:212465"
     misc_feature    330..365
                     /gene="LOC139903957"
                     /note="Sm2 motif; other site"
                     /db_xref="CDD:212465"
     polyA_site      584
                     /gene="LOC139903957"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gggtttattc agtattcaat tgattgaaag gtcgctcact atactagggt ttagtctgca
       61 actgcgttca ttcgtgaaca aacaaccaga cgatactctc actcacaata actgcagcca
      121 tggcgactaa agtacagagg atcatgactc aacccatcaa tctcatcttt aggtttctgc
      181 agagtaaagc tgggattcag atatggctat ttgagcagaa ggatttgagg attgaaggac
      241 gcattattgg gtttgatgag tacatgaatt tggttcttga tgaggctgag gaagttagca
      301 tcaagaagaa aacaagaaag cctctaggaa ggattttgct aaaaggcgac aacattaccc
      361 tcatgatgaa ttcgggaaag taaggagggc atttgcatag gataggtgct gaaaagaaga
      421 attgaagaat gttgattgtg gactcgtgtg tgaatcgatt cggcttgagt taatgttttt
      481 aagttgtaca cttttttaag cgcaaactgt agaaaaatgt caacgagtat gcttttactt
      541 tatgagtgaa tcttttcaaa aagttgcatt ttgtatgggg acta
//
LOCUS       XR_011778602            1772 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903958), ncRNA.
ACCESSION   XR_011778602
VERSION     XR_011778602.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1772
                     /gene="LOC139903958"
                     /note="uncharacterized LOC139903958; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903958"
     ncRNA           1..1772
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903958"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139903958"
ORIGIN      
        1 ctacttattg tacacttggt tgttgtaggt ttaataagat tttttaatta ggctcaagta
       61 catgcataca ccctattgta caggtgaaag aaatcagttc ccacagacaa aatcaaccgt
      121 catatctctc tttaaatgcg aaatacccca aatcgttttc accgtcgact aacccttcat
      181 gctgtcgtat tagctcacgc cactaccacc atcgaaaccg tgacgatttt tcagacaaaa
      241 ccttacaaac tttatatatt aacggcggat ttttcaaaaa caccgagaaa gtgaccggaa
      301 tgtcgaggaa gacgacggtt tgaataggtt cctgtcggaa acgattccga tgtagatgat
      361 gaacgagagt ttattttgct ggtggagata gctgcgttat atggtatgta tacattttga
      421 tgtaatttga tatgagttat gtttattgtg ttaattgata catacatgtt tatgtattcc
      481 aattcttgat tctaattggg ttttctgtat ttgcttactg atgatgttca cgttttggaa
      541 tctttatttg aaaaaggtgg taatttacca tttattattg atagtgttgc actcgctact
      601 ttgtttgaag gtgctggata gtttaaatgg ttgactgtaa accctaatgt tgaaatggtt
      661 gctgctttgt tcaatttact gtaaacggtc tccgatgtta caagttttat cttttaggtc
      721 accgattaaa gctttgatac tccaactaaa tcgatgaacg gcggcaatta attgtgtgtc
      781 aagaatacat gtatttttgc atttatcaat tttttcattc atagtttggt taacaatatt
      841 ttgttgtttg ctaagctatt aaattcaata agatttaaat gggtaaaccc taggtgcgct
      901 attatttgct tttctttttt gctagataat ttggtttggg tttgtaatag cttttcgatt
      961 ttttttctat ttggtagata aattatcaat tggaatcgga taataatttt gtttgtagat
     1021 gttgtatgaa ctcaaattat aggcagattt ccaaatgggt tgttcatgtg tttgtttaag
     1081 ctgttttttc ttcatgtatg tgtttagttt aatgaaataa tttgctgttg tcatatttat
     1141 tagtcaatgg atgctgtgtt taattcaaat tataggcaga tttctaaatg aatcgaaatt
     1201 taaggtgtgt tgtttcagca gtggaaagac agtttcctac cttcatcaat gtgtcctatt
     1261 tctttgtcaa catgtgtact tacaatcagt tgttaaacat ctatctgctt atgataaagg
     1321 gttgattgca gattgcacac cgtgtggata ataagggaag tttactttat taattattat
     1381 tttgttggct attattgaat aataagtgtg ccaacaatct ttttgttttt gtcacaggaa
     1441 caacaattta atttgttgat attatctaat gagtttgtca tgtgatatct tcctttacat
     1501 tgtgctatca gctcaggaat gaagtgtggg aggtcgccat aatcggcgga atgagacgct
     1561 gttggcgatg gtgagttttt attcatctca taagcgacgg aggtgaagag agttgcctgt
     1621 tccgcaggtg tttttttttt tttttttttt tttttttttg tcagcgttaa tagtccatgt
     1681 aaactacatg cctatgtatc tctgtatgag aacactaata tgtgcaaact gtatgagtct
     1741 tctatgcaat gataaatgta atgctctata ta
//
LOCUS       XR_011778603            1244 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903959), transcript variant X1, ncRNA.
ACCESSION   XR_011778603
VERSION     XR_011778603.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1244
                     /gene="LOC139903959"
                     /note="uncharacterized LOC139903959; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903959"
     ncRNA           1..1244
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903959"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139903959"
ORIGIN      
        1 aaacacggga gctgttaaaa aaattagggg gcacgctcat caagcaaagg gtttctatga
       61 tcctgactcc ggtgctagat tcccaatcta ttcacagaga tcctgactcc ggtgcttgat
      121 atctatgatc tccattaatc aaattgttaa tcggttacca gtataacatc tcgattcatt
      181 caattgttct aatccaattg aaacggtgga agcaataacc taatccttgg aagcaatctc
      241 gattcattcg attacttttg tgttcttttc ttttttcttt ttcttttata tcgttgtttt
      301 tgcaggtttt aacttcagct gttgattatc tctgatttag gccttctaat acgctgcaat
      361 ttgtcgatcc aagtcttcat gttctcggga tcttaaatca gttatccaac aattgctcca
      421 ggttgtaaaa gtttttactc gtacattatg gtcgttatca gtgcttgtcc aacgtattac
      481 aaggcaaagt tctcctatct ctaattgtac ccaatgcaga tgatttcagc tgaaaatttg
      541 gtgaagattt caacacatga tcgatcatca ggataggctt tcgtcaagga caactggtgt
      601 gtttgttaag ccccgaaaca ttcaacagta gatagaactg aaaaaacgtt cccggaaaga
      661 gttgagaggg gctatggaac cacaagctgc gggcatgact tgactatttt gtacaaatat
      721 tattcttaca tttgccgagt ttgatcatct atcattgcga agtgagtgta ttttaagata
      781 tctttgatga agacaataaa aatgacagtt caaaacagga tgtgatagtc ataagaaaag
      841 ctgcctactg aaaattttgt ctcagttctt caagtaaggg agcattttac atcgtgggta
      901 gcttaggtta ctatgacgag atgaccaaat tatggggcga attctaggat tttgtcaaca
      961 tctaatacaa tggtgatcca gatcctatgc aaagttaata cttggtgttg ccacaatgct
     1021 agatcgagtt tttaccccat tttttatgca taaaaacttc ctctagatgc aggcttatag
     1081 ttgatagaaa gattcctcaa gtatttggtc atgtcattat gggtgggttt gagttataga
     1141 ttgttattac caatcttgag cccagttcgg tactatggat ttatcatgac catcttttgt
     1201 ttaacataac aatcaaagtg atatataaaa ccgacattga ttga
//
LOCUS       XR_011778604            1154 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903959), transcript variant X2, ncRNA.
ACCESSION   XR_011778604
VERSION     XR_011778604.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1154
                     /gene="LOC139903959"
                     /note="uncharacterized LOC139903959; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903959"
     ncRNA           1..1154
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903959"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139903959"
ORIGIN      
        1 aaacacggga gctgttaaaa aaattagggg gcacgctcat caagcaaagg gtttctatga
       61 tcctgactcc ggtgctagat tcccaatcta ttcacagaga tcctgactcc ggtgcttgat
      121 atctatgatc tccattaatc aaattgttaa tcggttacca gtataacatc tcgattcatt
      181 caattgttct aatccaattg aaacggtgga agcaataacc taatccttgg aagcaatctc
      241 gattcattcg attacttttg tgttcttttc ttttttcttt ttcttttata tcgttgtttt
      301 tgcaggtttt aacttcagct gttgattatc tctgatttag gccttctaat acgctgcaat
      361 ttgtcgatcc aagtcttcat gttctcggga tcttaaatca gttatccaac aattgctcca
      421 ggttgtaaaa gtttttactc gtacattatg gtcgttatca gtgcttgtcc aacgtattac
      481 aaggcaaagt tctcctatct ctaattgtac ccaatgcaga tgatttcagc tgaaaatttg
      541 gtgaagattt caacacatga tcgatcatca ggataggctt tcgtcaagga caactggtgt
      601 gtttgttaag ccccgaaaca ttcaacagta gatagaactg aaaaaacgtt cccggaaaga
      661 gttgagaggg gctatggaac cacaagctgc gggcatgact tgactatttt gtacaaatat
      721 tattcttaca tttgccgagt ttgatcatct atcattgcga agtgagtgta ttttaagata
      781 tctttgatga agacaataaa aatgacagtt caaaacagga tgtgatagtc ataagaaaag
      841 ctgcctactg aaaattttgt ctcagttctt caagtaaggg agcattttac atcgtgggta
      901 gcttaggtta ctatgacgag atgaccaaat tatggggcga attctagctt ccgaagtaga
      961 ctgctaaaag taccagctgg cttactggat gtgcagctag tgtaagttct ttttgtcgat
     1021 ggtccagaaa tgacctaaat acaataaatc ggtgttgggt tctgtaagcc gtattctgat
     1081 aattattcat cattgtaact ttgtttttat atacgatttg ggctttttga ataaaagttt
     1141 tctttattct ttct
//
LOCUS       XM_071885889             668 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903960), mRNA.
ACCESSION   XM_071885889
VERSION     XM_071885889.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..668
                     /gene="LOC139903960"
                     /note="uncharacterized LOC139903960; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903960"
     CDS             32..595
                     /gene="LOC139903960"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741990.1"
                     /db_xref="GeneID:139903960"
                     /translation="MAEYESNHHNYSIPKETALQALNTIIQLHFEKTLEKKRAVDLQK
                     KELWKLFQLFFLFLALVFAAQVQSPRLQCRHCWVPIGLLSLSHLIFYVSVAQTLRCIN
                     GFKYQRRCHKLTLGLATERLRQIRMRMSSVVAGGEDVVRDDYEINYQEPPDTYFGKFK
                     RNWALHFGFLILIYIFMVSSSVVLLCF"
     polyA_site      668
                     /gene="LOC139903960"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacaacatca gggtactttt ttcgtgctaa aatggcagag tacgaaagca accaccataa
       61 ctacagcata ccaaaagaaa ctgccctgca agcattaaac accataatcc agcttcattt
      121 cgagaaaacc cttgagaaaa aacgagccgt ggacctacaa aaaaaggagc tatggaagct
      181 ttttcagctc ttttttctat ttttggccct tgtatttgca gctcaagtcc agtcccctcg
      241 gctccaatgt cgtcactgtt gggtcccaat tggtctactc tcactttccc acctcatctt
      301 ctatgtgtca gtggctcaga ctcttaggtg catcaatggg ttcaagtatc aaagacggtg
      361 ccataaactg acacttgggt tagccaccga gcggctcagg cagatcagga tgagaatgag
      421 tagtgtggtt gctggcggtg aagatgttgt tagggatgat tatgagatta attatcaaga
      481 gccaccagat acttattttg gtaagtttaa gaggaattgg gctctgcatt ttggtttctt
      541 gatcttgatt tatattttta tggtgtcttc ttctgttgtt cttttgtgct tttaagattt
      601 gttggtacta taatgacaca ggcttcagct ttagtttaat caatgttatt atcattattt
      661 tctggttt
//
LOCUS       XM_071885890            3390 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate receptor 2.7-like
            (LOC139903961), transcript variant X1, mRNA.
ACCESSION   XM_071885890
VERSION     XM_071885890.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3390
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3390
                     /gene="LOC139903961"
                     /note="glutamate receptor 2.7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139903961"
     CDS             5..2827
                     /gene="LOC139903961"
                     /codon_start=1
                     /product="glutamate receptor 2.7-like"
                     /protein_id="XP_071741991.1"
                     /db_xref="GeneID:139903961"
                     /translation="MENIICHHTVVLAFVMITISFICVTTEKIKIEIGVILDMETSIG
                     KMSSTCISMALRDFYQQHVNYTTEIQLHFRDAKQDNVQAASAAIDLLKNDQVMAILGP
                     MRSAQADFVINIGNKSNVPIISPATSPYLSTDDNVYFIRTAPDSSLQLEPIAELINHF
                     KWKEIVFIYEAGEYGRGLVPYLSEAMMNIDTKVMSRNAISPSASDDSILEKLYKLKTM
                     QTRVFVVHVLPDLAVRFFKKANEAGMMEEGYVWIITEVLTSRLHSFDHTVIDSMQGVL
                     GVKSYIPRSNELVKFEKQWKRQFMKQYPEDDVTELDMFGIWTYDTFFVLAMALERIGL
                     SEMNTSFKRQRNSTTDLGATGISEMGSRILPWIRNSCFKGLSGDFRIVNGQLQWSVHQ
                     IVNVIGTKENGIGFWTSKNGISKKLNEQTNNLRAVIWPGDSHVIPKGWEIPTSNVNTL
                     RVGVPVQRGFGVFIDANTNPQTNQVIITGFVVDVFNAVIDALPYAVKHEFVTGTYIGL
                     MYGLSDGTYDAVAGDITIRANRADIVDFTLPYTESGVSMIVAIKDERKSAWIFMRPLE
                     KELWITIGAFFIYTGLVVWILEHQVNKEFRGPPHKQVGMIFWFSFSTLVFAHREKVMS
                     NLSRFVVVVWVFVVLVLTSSYTASLTSMLTVQQLRPTYTDIHEIMRNGESVGYQDGSF
                     VLEILKDMGFDDSKVKNYSTFEQYDEALQKGSKNGGVSAIMDELPYNRVFLAKYCSNY
                     TMTGPIYKSAGFGFAFPKGSPLVHDVSTAVLKVTENQMTNLSRKWFGDSASCDQQNDP
                     TVTSDKLTLDSFKGLFLIAGLSSTSALMFFFLNFLYQNRRMLSSQDSVSQKLVAIAKT
                     FDLFKDDESKRATAEVAAVDESVIADSINNSPANNIFHQDEGFLTNEPGTPVRDSIEL
                     IETTAQQRTPVRLTIQVLETSVESRV"
     misc_feature    101..1255
                     /gene="LOC139903961"
                     /note="periplasmic ligand-binding domain of Arabidopsis
                     thaliana glutamate receptors and its close homologs in
                     other plants; Region: PBP1_GABAb_receptor_plant; cd19990"
                     /db_xref="CDD:380645"
     misc_feature    order(140..142,377..382,944..946)
                     /gene="LOC139903961"
                     /note="putative ligand binding site [chemical binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    order(245..247,254..256,341..343,596..598)
                     /gene="LOC139903961"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    1346..2362
                     /gene="LOC139903961"
                     /note="Plant glutamate receptor domain; the type 2
                     periplasmic binding protein fold; Region: GluR_Plant;
                     cd13686"
                     /db_xref="CDD:270404"
     misc_feature    1700..2461
                     /gene="LOC139903961"
                     /note="Ligand-gated ion channel; Region: Lig_chan;
                     pfam00060"
                     /db_xref="CDD:459656"
ORIGIN      
        1 tagtatggag aatataatat gtcaccatac agtagtacta gcctttgtaa tgattactat
       61 aagttttata tgtgttacaa cagaaaaaat aaagatagaa ataggtgtca ttttggatat
      121 ggaaacaagc attggtaaga tgagcagtac ctgcatttca atggcgttac gtgatttcta
      181 tcagcaacac gtaaactata ccaccgaaat tcagcttcac tttcgtgatg ctaaacaaga
      241 caacgttcaa gccgcttcag cagccatcga cctgttgaaa aacgatcaag tcatggctat
      301 tttaggaccc atgagatctg cacaagcaga ttttgtgatt aacatcggta acaaatcaaa
      361 tgttcctata atctcgcctg caactagccc ttatctttcc acagacgaca acgtttactt
      421 cattcgtact gcacctgatt cgtccttaca actcgaaccc attgcagaat tgatcaacca
      481 ctttaaatgg aaagaaatag tgtttattta tgaagctggt gaatatggga gaggccttgt
      541 tccttattta tcggaagcca tgatgaatat tgatacaaaa gttatgtctc gtaacgctat
      601 atctccttcc gcttcagatg attcgatcct tgaaaagctt tacaagctga aaacaatgca
      661 gactcgtgtt tttgttgtac acgtgttgcc cgatttggcg gtgcgatttt tcaagaaagc
      721 aaatgaagca ggaatgatgg aagaaggtta tgtttggatc ataactgaag tgctcacgag
      781 ccgtttacat tctttcgatc atacggttat agattcgatg caaggagtat taggtgtgaa
      841 gtcttatatc ccgaggtcta acgagctagt aaagtttgag aaacaatgga aacgacaatt
      901 tatgaaacaa tatcctgaag acgatgttac ggaactagac atgtttggga tatggacata
      961 cgatacattt tttgtgttgg caatggcact ggagagaatc ggattaagtg aaatgaatac
     1021 tagtttcaaa cgacaacgga actcaacaac tgatttgggt gctactggaa tatctgaaat
     1081 ggggtcaagg attcttccat ggatccgaaa ttcatgcttt aaagggctaa gtggcgattt
     1141 ccgtatagtt aacggacagt tacaatggtc ggttcaccag attgtgaacg taataggaac
     1201 gaaggagaat ggtatcgggt tttggacttc taaaaacggc atctcgaaga aattaaacga
     1261 acaaacgaat aatcttaggg ccgttatatg gcctggtgac agtcatgtca tacctaaagg
     1321 atgggagatt ccaacgagca acgtaaacac gttaagagtc ggcgtacctg tacaacgggg
     1381 gtttggcgtg tttattgatg ctaataccaa ccctcaaaca aaccaagtaa tcattactgg
     1441 gtttgttgtg gacgttttca acgcagttat tgatgcactt ccttacgctg tcaaacatga
     1501 gttcgtaaca ggaacctata tcggtcttat gtacggtctc tctgatggga catatgatgc
     1561 agtggctgga gatattacaa tacgtgcaaa ccgtgcggat attgttgatt tcacgttacc
     1621 gtacacagaa tcaggcgtgt cgatgattgt tgcgatcaag gatgagagga agagcgcatg
     1681 gatcttcatg agaccattag agaaagagct ttggataacg attggtgcgt ttttcatcta
     1741 cacaggactc gtggtatgga ttctagaaca tcaagtaaac aaagagtttc gcgggccacc
     1801 tcataaacaa gtcgggatga tattctggtt ttccttctcc acgctcgtgt ttgcccatcg
     1861 ggagaaggtg atgagtaact tatcgagatt tgtggtagtt gtgtgggtgt ttgtggtact
     1921 cgtgctcact tcaagctaca cagcaagctt gacatctatg ttaaccgtac aacagcttag
     1981 gccgacgtac actgatattc atgagatcat gagaaacggt gaatcagtag gataccaaga
     2041 tggttctttc gtattagaga ttttgaaaga tatgggtttt gatgatagca aggtaaaaaa
     2101 ctacagcacg tttgagcagt atgacgaagc cctccaaaaa ggaagtaaaa atggaggtgt
     2161 ttccgcgatt atggatgaac tcccctataa tagagttttc ttggcaaaat attgttccaa
     2221 ttataccatg actggtccca tttacaaatc cgcaggcttt ggttttgcat ttccaaaagg
     2281 gtctccacta gtccatgatg tttcaacagc agtcctgaaa gtaacagaaa atcaaatgac
     2341 gaacctttca agaaagtggt tcggtgattc ggccagttgt gatcagcaga acgatcctac
     2401 ggtcacctcc gacaagctca cacttgatag cttcaaggga ctttttctca ttgctggctt
     2461 atcatcaact tctgcactca tgtttttctt cctaaatttt ctttatcaga atagacgaat
     2521 gttatcttca caagattcag ttagtcaaaa gctagttgca attgcaaaaa cttttgactt
     2581 gttcaaggac gacgaatcca aaagggccac cgcagaggta gcagcagtag atgaatctgt
     2641 cattgcggac agtattaata atagtcccgc aaacaacata tttcatcaag atgaaggctt
     2701 tttaactaat gaacccggga caccggtacg tgacagtatt gaactcatag aaactactgc
     2761 tcaacagagg acaccagttc gtctcaccat tcaagtccta gaaactagtg ttgagagccg
     2821 ggtttaaaca tgatgatgcc aattttctat gtagttagtt ttatataact atataataag
     2881 gtttcgtgtt ccatagtata tactagtgaa gaggtccggg gttactattt tgggtgatac
     2941 aatctctgaa tcccatattt aaaagtttcc tagatgtgat atgcacttat tattttatag
     3001 cagctaatat gtaagcaaaa gcagatattg tctcggttac aaaagttgag tgcatcaagc
     3061 aaaagtaaca aaagttaagt tgggatgttg ctgctgttat cataatttgg tggagcatct
     3121 ttgtgattct gccggcaaca tttacacaca aaacctagtc ttctttcctt ggagttggtc
     3181 tgctaatctt ccttttttac tgattaggta atttcttata tgtagaatag tgtaactgta
     3241 aaatgaatgc tacctggttc tgtgaacaga acccgtttgt ggttgtgcgc tctatgtgcg
     3301 cggcactcac caatttcaga tttcagattt tagttttcga ccaaattgac acctgaccca
     3361 aattagacaa taccatcgaa tctcctgagc
//
LOCUS       XR_011778605            3332 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate receptor 2.7-like
            (LOC139903961), transcript variant X2, misc_RNA.
ACCESSION   XR_011778605
VERSION     XR_011778605.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3332
                     /gene="LOC139903961"
                     /note="glutamate receptor 2.7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139903961"
     misc_RNA        1..3332
                     /gene="LOC139903961"
                     /product="glutamate receptor 2.7-like, transcript variant
                     X2"
                     /db_xref="GeneID:139903961"
ORIGIN      
        1 tagtatggag aatataatat gtcaccatac agtagtacta gcctttgtaa tgattactat
       61 aagttttata tgtgttacaa cagaaaaaat aaagatagaa ataggtgtca ttttggatat
      121 ggaaacaagc attggtaaga tgagcagtac ctgcatttca atggcgttac gtgatttcta
      181 tcagcaacac gtaaactata ccaccgaaat tcagcttcac tttcgtgatg ctaaacaaga
      241 caacgttcaa gccgcttcag cagccatcga cctgttgaaa aacgatcaag tcatggctat
      301 tttaggaccc atgagatctg cacaagcaga ttttgtgatt aacatcggta acaaatcaaa
      361 tgttcctata atctcgcctg caactagccc ttatctttcc acagacgaca acgtttactt
      421 cattcgtact gcacctgatt cgtccttaca actcgaaccc attgcagaat tgatcaacca
      481 ctttaaatgg aaagaaatag tgtttattta tgaagctggt gaatatggga gaggccttgt
      541 tccttattta tcggaagcca tgatgaatat tgatacaaaa gttatgtctc gtaacgctat
      601 atctccttcc gcttcagatg attcgatcct tgaaaagctt tacaagctga aaacaatgca
      661 gactcgtgtt tttgttgtac acgtgttgcc cgatttggcg gtgcgatttt tcaagaaagc
      721 aaatgaagca ggaatgatgg aagaaggtta tgtttggatc ataactgaag tgctcacgag
      781 ccgtttacat tctttcgatc atacggttat agattcgatg caaggagtat taggtgtgaa
      841 gtcttatatc ccgaggtcta acgagctagt aaagtttgag aaacaatgga aacgacaatt
      901 tatgaaacaa tatcctgaag acgatgttac ggaactagac atgtttggga tatggacata
      961 cgatacattt tttgtgttgg caatggcact ggagagaatc ggattaagtg aaatgaatac
     1021 tagtttcaaa cgacaacgga actcaacaac tgatttgggt gctactggaa tatctgaaat
     1081 ggggtcaagg attcttccat ggatccgaaa ttcatgcttt aaagggctaa gtggcgattt
     1141 ccgtatagtt aacggacagt tacaatggtc ggttcaccag attgtgaacg taataggaac
     1201 gaaggagaat ggtatcgggt tttggacttc taaaaacggc atctcgaaga aattaaacga
     1261 acaaacgaat aatcttaggg ccgttatatg gcctggtgac agtcatgtca tacctaaagg
     1321 atgggagatt ccaacgagca acgtaaacac gttaagagtc ggcgtacctg tacaacgggg
     1381 gtttggcgtg tttattgatg ctaataccaa ccctcaaaca aaccaagtaa tcattactgg
     1441 gtttgttgtg gacgttttca acgcagttat tgatgcactt ccttacgctg tcaaacatga
     1501 gttcgtaaca ggaacctata tcggtcttat gtacggtctc tctgatggga catatgatgc
     1561 agtggctgga gatattacaa tacgtgcaaa ccgtgcggat attgttgatt tcacgttacc
     1621 gtacacagaa tcaggcgtgt cgatgattgt tgcgatcaag gatgagagga agagcgcatg
     1681 gatcttcatg agaccattag agaaagagct ttggataacg attggtgcgt ttttcatcta
     1741 cacaggactc gtggtatgga ttctagaaca tcaagtaaac aaagagtttc gcgggccacc
     1801 tcataaacaa gtcgggatga tattctggtt ttccttctcc acgctcgtgt ttgcccatcg
     1861 ggagaaggtg atgagtaact tatcgagatt tgtggtagtt gtgtgggtgt ttgtggtact
     1921 cgtgctcact tcaagctaca cagcaagctt gacatctatg ttaaccgtac aacagcttag
     1981 gccgacgtac actgatattc atgagatcat gagaaacggt gaatcagtag gataccaaga
     2041 tggttctttc gtattagaga ttttgaaaga tatgggtttt gatgatagca aggtaaaaaa
     2101 ctacagcacg tttgagcagt atgacgaagc cctccaaaaa ggaagtaaaa atggaggtgt
     2161 ttccgcgatt atggatgaac tcccctataa tagagttttc ttggcaaaat attgttccaa
     2221 ttataccatg actggtccca tttacaaatc cgcaggcttt ggttttgcat ttccaaaagg
     2281 gtctccacta gtccatgatg tttcaacagc agtcctgaaa gtaacagaaa atcaaatgac
     2341 gaacctttca agaaagtggt tcggtgattc ggccagttgt gatcagcaga acgatcctac
     2401 ggtcacctcc gacaagctca cacttgatag cttcaaggga ctttttctca ttgctggctt
     2461 atcatcaact tctgcactca tgtttttctt cctaaatttt ctttatcaga atagacgaat
     2521 gttatcttca caagattcag ttagtcaaaa gctagttgca attgcaaaaa cttttgactt
     2581 gttcaaggac gacgaatcca aaagggccac cgcagaggta gcagcagtag atgaatctgt
     2641 cattgcggac agtattaata atagtcccgc aaacaacata tttcatcaag atgaaggctt
     2701 tttaactaat gaacccggga caccggtacg tgacagtatt gaactcatag aaactactgc
     2761 tcaacagagg acaccagttc gtctcaccat tcaagtccta gaaactagtg ttgagagccg
     2821 ggtttaaaca tgatgatgcc aattttctat gtagttagtt ttatataact atataataag
     2881 gtttcgtgtt ccatagtata tactagtgaa gaggtccggg gttactattt tgggtgatac
     2941 aatctctgaa tcccatattt aaaagtttcc tagatgtgat atgcacttat tattttatag
     3001 cagctaatat gtaagcaaaa gcagatattg tctcggttac aaaagttgag tgcatcaagc
     3061 aaaagtaaca aaagttaagt tgggatgttg ctgctgttat cataatttgg tggagcatct
     3121 ttgtgattct gccggcaaca tttacacaca aaacctagtc ttctttcctt ggagttggtc
     3181 tgctaatctt ccttttttac tgattagggg agaaggtgat gagtaactta tcgagatttg
     3241 tggtgattgt gtgggtgttt gtggtgctcg tgctcacttc gagctacaca acgagcttga
     3301 catctatgtt aactgtacaa tagcttaagc ca
//
LOCUS       XR_011778606             684 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903962), ncRNA.
ACCESSION   XR_011778606
VERSION     XR_011778606.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139903962"
                     /note="uncharacterized LOC139903962; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903962"
     ncRNA           1..684
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903962"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139903962"
ORIGIN      
        1 tcagacactt ggcgatttta agcgaaagaa cgaagaactc aagaattttt tacatacatt
       61 tagttgtaag agtgtaaaca tcatcagtaa cacctgttag cactcttgga accttatatt
      121 tgcttccaat catcgttact tgaagatttt gggggtttta taaaccctcg acttaagatt
      181 catctactgc tgctacctct gcggtggccc ttttggattc gtcgtccttg aacaagtcaa
      241 aagtttttgc aattgcaact agcttttgac taactgaatc ttgtgaagat aacattcgtc
      301 tattctgata aagaaaattt aggaagaaaa acatgagtgc agaagttgat gataagccag
      361 caatgagaaa aagtcccttg aagctatcaa gtgtgagctt gtcggaggtg accgtaggat
      421 cgttctgctg atcacaactg gccgaatcac cgaaccactt tcttgaaagt gtacgtcggc
      481 ctaagctgtt gtacggttaa catagatgtc aagcttgctg tgtagcttga agtgagcacg
      541 agtaccacaa acacccacac aactaccaca aatctcgata agttactcat caccttctcc
      601 cctgcatacc tccaatttgt tagtaattga attatggttc aatatgtgtg caaatgtaaa
      661 agtactgcta atatacttgc tatt
//
LOCUS       XM_071885891            1257 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate receptor 2.8-like
            (LOC139903963), mRNA.
ACCESSION   XM_071885891
VERSION     XM_071885891.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1257
                     /gene="LOC139903963"
                     /note="glutamate receptor 2.8-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903963"
     CDS             195..1211
                     /gene="LOC139903963"
                     /codon_start=1
                     /product="glutamate receptor 2.8-like"
                     /protein_id="XP_071741992.1"
                     /db_xref="GeneID:139903963"
                     /translation="MRINELCSLTFFAEEKLISNLSRFVVIVWVFVVLVLTSSYTANL
                     TSMLTVHQLQPTNTDILEIMRNGESVGYQDGSFVVDMLKKMGFKDAQLKNYSTFEQYD
                     EALQNGSLNGGVSAIMDELPYIRIFLGKYCTKYTMTGPTYKTAGFGFAFPKGSPLVHD
                     VSRAVLQVTEEQMTNISKLWFGDSAGCDQSNGATITSDRLTLDSFKGLFLIAGLSSIS
                     ALIIFVFMFLYQNRTVLVSEVPISEKLAAIATSFNEFKDKDDESKTTSAVGRVDEPVL
                     DESVNNSPGISVHGQEAEVISTDISATESSTPVHDTVQGLSSTELGSPVQGNLHVVEN
                     ITSL"
     misc_feature    <366..737
                     /gene="LOC139903963"
                     /note="Type 2 periplasmic binding fold superfamily;
                     Region: Periplasmic_Binding_Protein_Type_2; cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 gtcggtttgg gcaaggggtc agaacagttt tggatagaaa tgagtcaggg gtcaaacggg
       61 tcagttttta aacgggtcca aattggtcag gttgggtaat aggtcgaaat gggtcataag
      121 tcaaatgggc tgaaaagggt caggtcggga cccatttttg gtcctttttt taaaaatgaa
      181 atagaagtct tacaatgaga ataaatgagc tatgtagttt aacatttttt gcggaggaga
      241 agttgataag caacttatcg agatttgtgg tgatcgtgtg ggtgtttgtg gttctcgtgc
      301 tgacatcgag ctacacagca aatttgacat ccatgttaac tgtgcaccag cttcagccta
      361 caaatactga tatccttgag atcatgagaa atggtgaatc ggtagggtat caagatggtt
      421 cctttgttgt tgatatgtta aaaaagatgg gatttaaaga tgcccaattg aaaaactaca
      481 gcacgtttga gcagtacgac gaggcacttc aaaacggaag tctaaacgga ggtgtttctg
      541 caatcatgga tgaacttcct tatatcagaa ttttcttggg aaaatactgt accaagtata
      601 ccatgaccgg tcccacctac aaaaccgcag gcttcggttt tgcatttccg aaaggatctc
      661 ctctagtcca tgacgtttcg agagcggtcc tacaagtaac agaagagcaa atgacaaaca
      721 tttcaaaact gtggtttgga gattcagctg gttgtgatca gtcaaatgga gctacaatca
      781 cgtccgatag gctcacgctc gatagcttta aaggcctttt tctcattgca ggcttatcat
      841 caatttctgc tctcataatt ttcgtcttca tgtttttgta tcaaaataga acagtactag
      901 tatcagaagt tccaataagc gaaaaacttg ctgcaattgc aacatccttt aatgagttta
      961 aagataaaga tgatgaatcc aaaacgacaa gcgcagtggg aagagtggat gaaccagtct
     1021 tagatgagag tgtcaacaat agtccaggaa ttagcgtaca cggtcaagaa gccgaagtta
     1081 tatctacgga tatttctgct actgaatcta gtacaccggt gcacgacacc gtacaaggat
     1141 tatcgagtac tgaacttggg tctccagttc aaggcaattt acatgttgta gaaaatatca
     1201 catcgctcta attatgatga tgatgatgat gatgatgatg atgatgatga tgatagt
//
LOCUS       XM_071885892            2636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            EXO84B-like (LOC139903964), mRNA.
ACCESSION   XM_071885892
VERSION     XM_071885892.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2636
                     /gene="LOC139903964"
                     /note="exocyst complex component EXO84B-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139903964"
     CDS             251..2575
                     /gene="LOC139903964"
                     /codon_start=1
                     /product="exocyst complex component EXO84B-like"
                     /protein_id="XP_071741993.1"
                     /db_xref="GeneID:139903964"
                     /translation="MSAKISSRSRGGAPVKSSSKETGPKLEENLNIFKSDKFDADSFV
                     HSKCTTLNEKEIRHLCSYLLDLKKASAEEMRRSVYANYTAFIRTSKEISDLEGELLSI
                     RNLLSTQATIIHGLAEGVHVESLSIAVPGGSLSNGLSADLDRDPSDLENWLIEFPDIL
                     DVLLAERRVDEALATLDEGERIASEAKEKDSPSPVVLKSLQTAITECRQRLANQLADA
                     ASQPTTRGSELRAAISALKKLGDGPRAHSLLLQAHYQRLQSNMQSLRPSSTSYGGAYT
                     AAISQLVFSVIAQTTTDSKSIFGNEPSYSSELVMWATKQTEDFALLVKRHALASSAAA
                     GGLRAAAECVQIAMGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIEESTAALA
                     AADDWDLSSSQAVTRQSGRTSTTSLNAITSIQHKLSSSAQRFNLMVQDFFEDVEPLLS
                     MQLGGKMLEGLFDVYNSYVSMLIRALPGSMEEEANYDGSVNKIVRMAETEAQQMALLS
                     NASLLADELLPRAAMKLTPIVQSIYKDDPRSRRPLDRQNRNPEQREWKRRLASIVDRL
                     KDSFCRQHALDLIFTEDGDSHLTADMYLNMDGIIEEIEWFPSPIFQELYAKLYRMSGI
                     AAEMFVGRERFSTMLLMRLTETVILWLSEDQTFWDDIEEGPTPLGPLGLQQFYLDMKF
                     VISFASQGRYLSRNLNRVVNEIINKALAAFSATGVDPYSVLPEDEWFADICQDAIERL
                     SGKPRFVNGERDLSSPTASVSAQSISSMRSHGSS"
     misc_feature    347..577
                     /gene="LOC139903964"
                     /note="Vps51/Vps67; Region: Vps51; pfam08700"
                     /db_xref="CDD:462568"
     misc_feature    704..1327
                     /gene="LOC139903964"
                     /note="Exocyst component 84 C-terminal; Region: Exo84_C;
                     pfam16528"
                     /db_xref="CDD:465161"
ORIGIN      
        1 tctatccttc tctttcatac ataaaccggt ggatatccgt cgtaacctac taccgcggca
       61 ccgccgtaga tcattcgtcg gagaatcctc tctcatgcta attcgactcc tacagattca
      121 gatcttggtt tttaactcga tcaacaaatc acttccttct attcttcaat aatttaacta
      181 ataagtacta caattacttg attcaagccc tagattctcg ttcattcgat ctcgttttag
      241 cagcagcgat atgtctgcga aaatatcatc caggtcaaga ggcggtgcac ctgtaaaaag
      301 cagttccaag gaaaccgggc ctaagcttga ggagaatctc aatatcttca agtccgataa
      361 attcgatgcc gatagttttg ttcactccaa gtgtaccaca cttaacgaaa aggagataag
      421 gcacttatgc tcatatcttt tggatctcaa gaaagcttcc gcagaggaaa tgcggagaag
      481 tgtatatgct aattatactg cattcatacg cacatcaaaa gagatatcag atttagaagg
      541 tgagctactg tccataagaa acttgctatc tactcaagct accataattc acggtctagc
      601 tgagggtgtc cacgtggaat ctttatctat tgctgttccg ggtggttcat tatcaaatgg
      661 tttatctgct gacctggaca gagatccgtc agatctagag aattggttaa ttgagtttcc
      721 tgatatcctt gatgttttat tagctgaaag gagggttgat gaagctttgg ctacccttga
      781 tgaaggtgaa cgtatagctt cagaagcaaa agaaaaggat tcaccgagtc ctgttgtttt
      841 aaagtctcta caaactgcca taactgaatg caggcaaaga ttagccaatc agcttgctga
      901 tgcggcttct caacctacaa cacgtggcag tgagcttcgt gcagctatta gtgctcttaa
      961 aaaacttggt gatggtccgc gagctcatag tctactgctt caagcacatt atcagaggct
     1021 tcaaagtaac atgcaaagtc ttcgtccttc gagtacgtca tatgggggag catatactgc
     1081 agctatatct caactggtgt tttctgtaat tgctcaaaca acgaccgatt ctaaatctat
     1141 atttggaaat gaaccatctt atagttctga gcttgtgatg tgggctacaa aacaaactga
     1201 agactttgct cttcttgtta aaagacatgc attagcttca tctgctgctg ctggcgggtt
     1261 aagggctgct gctgaatgtg ttcaaatcgc tatgggacat tgttctttgt tggaagctcg
     1321 tggtttggca ctttgtcccg tgctcttgaa actttttagg cctagtgttg aacaagcact
     1381 cgatgccaat ttgaaacgaa ttgaagagag tacagctgca ttggctgcag ccgatgattg
     1441 ggatctttct tcttctcaag ctgttacacg ccagtctgga aggacttcaa ctacatccct
     1501 caatgccata acatccattc agcataagct ctctagtagt gctcaaagat tcaatttgat
     1561 ggtccaggat ttcttcgagg atgtagaacc actgctaagc atgcagttgg gaggtaaaat
     1621 gttggaggga ttgttcgacg tatataactc gtacgttagc atgctcataa gagcactccc
     1681 aggctccatg gaagaagaag cgaactacga tggctctgta aataagatag ttaggatggc
     1741 cgagactgaa gcacagcaaa tggcattgct ttcaaatgca tccttgttgg ctgatgaact
     1801 gttacctcgt gcagccatga aacttacccc tatagttcaa tctatttaca aagatgaccc
     1861 tcgtagtaga agacccttag atcgacaaaa tcgaaaccct gaacaaaggg aatggaagag
     1921 gcgtcttgct agcatagtag acagattgaa agatagcttc tgcagacaac acgctttaga
     1981 tctcattttt actgaagatg gcgatagcca tctaactgct gatatgtact taaacatgga
     2041 tgggattatt gaggaaatag aatggttccc ttctccaata tttcaggaac tctatgcaaa
     2101 gctttacagg atgtctggta tagcagcaga aatgttcgtt ggcagggaac gtttttcaac
     2161 aatgttatta atgaggctta cagaaactgt catcttatgg ctttcagaag accaaacgtt
     2221 ttgggatgat atcgaagaag gacctacccc tttaggtcct cttggccttc aacagttcta
     2281 tttggatatg aagtttgtca tctcttttgc ttcccaaggg cgttacttat ctcgaaattt
     2341 gaatcgagtc gtgaacgaga ttattaataa agcacttgca gctttctctg caacgggagt
     2401 agatccttat agtgtacttc ctgaggacga gtggtttgct gatatatgtc aagatgcaat
     2461 agagaggttg agcgggaagc caagattcgt gaatggggaa cgggatctaa gcagcccgac
     2521 tgcttctgtt tcggcacaat cgatatcatc tatgagatct cacgggagtt cgtaaggcaa
     2581 ctgattcccc tcgtatatct gggatctact acgttttttc tgtaatcata tatttt
//
LOCUS       XM_071885893             482 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP synthase subunit
            epsilon, mitochondrial (LOC139903965), mRNA.
ACCESSION   XM_071885893
VERSION     XM_071885893.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..482
                     /gene="LOC139903965"
                     /note="ATP synthase subunit epsilon, mitochondrial;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139903965"
     CDS             82..294
                     /gene="LOC139903965"
                     /codon_start=1
                     /product="ATP synthase subunit epsilon, mitochondrial"
                     /protein_id="XP_071741994.1"
                     /db_xref="GeneID:139903965"
                     /translation="MASTAAVPFWRSAGMTYITYSNICANLVRNCLKEPYKSEAISRE
                     KVHFSVSKWADGKPEKPTIRSDSPVE"
     misc_feature    103..249
                     /gene="LOC139903965"
                     /note="Mitochondrial ATP synthase epsilon chain; Region:
                     ATP-synt_Eps; pfam04627"
                     /db_xref="CDD:461373"
     misc_feature    order(109..114,124..135,142..147,157..159,208..240)
                     /gene="LOC139903965"
                     /note="gamma subunit interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:213396"
     misc_feature    order(130..132,139..156,169..180,187..189,208..210)
                     /gene="LOC139903965"
                     /note="delta subunit interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:213396"
     polyA_site      482
                     /gene="LOC139903965"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtcacaaaaa ttccgtttat cagagactct tgttatacag atagaggaga ttgaaaaata
       61 tatacagaaa ctagggtttc gatggcttca acagccgcag tgcctttttg gagatctgcc
      121 ggtatgacat acataacgta ttccaacata tgcgctaacc ttgtcaggaa ctgcctgaaa
      181 gagccgtaca aatctgaagc aatcagccgt gaaaaagtcc atttctccgt ttccaaatgg
      241 gccgatggaa aaccagagaa acctactatt cggtctgatt ctcctgtcga gtgaagctgg
      301 aagacgtcac atttcgcatt tgttacgaag tatatctttt aaattatagg gcgttgtgct
      361 tctgatttgg atttttaaag ttgaaggtct tccttctcga acaatgttat caataataaa
      421 tcttgcagcg ttttcttgaa cccgaaccgt atttgaatcg attatttatt ggtctttcct
      481 ga
//
LOCUS       XM_071885894            1617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MANNAN
            SYNTHESIS-RELATED 1-like (LOC139903966), mRNA.
ACCESSION   XM_071885894
VERSION     XM_071885894.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1617
                     /gene="LOC139903966"
                     /note="protein MANNAN SYNTHESIS-RELATED 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139903966"
     CDS             183..1427
                     /gene="LOC139903966"
                     /codon_start=1
                     /product="protein MANNAN SYNTHESIS-RELATED 1-like"
                     /protein_id="XP_071741995.1"
                     /db_xref="GeneID:139903966"
                     /translation="MGIDPRQIVAGVLTVTMFLMLGNMVKRQHFDAPISHHVNRAGLT
                     QSFDEKDSDRSVAVDGDSSWKAESAGLKPCWSKSILEEPDETKGYVTFSLTNGPEYHV
                     SQIADAVVVARYLKATLVVPDIRGSQPGDRRNFGDIYDIEKFVSSLDGVVKVVKSQPS
                     ELSSKNLAVLRIPNRLTEDYIVENIVPVFKSKGNVRLATYFPSVNMKKGKDEQEEKVT
                     VGCLAMFGTLELQPEIREVVDSMVDRLKTLSQKSDGQFVAVDVRLDMLNHKGCQGSKK
                     CYGPQEIALFLRKIGFSKNSAVYLTQSRWDSQLDTMKDLFPKTYTKEGIMPMEKKQKF
                     LGSDASEYEKVIDFYVCSESDVFVPAISGLFYANVAGKRIGLGKTQILVPDDDASASS
                     AAGNYISRYVSKKNHMAYSCFC"
     misc_feature    447..1325
                     /gene="LOC139903966"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; Region: O-FucT_plant; cd11299"
                     /db_xref="CDD:211385"
     misc_feature    order(471..482,960..962,966..968,1083..1091,1212..1214,
                     1269..1277)
                     /gene="LOC139903966"
                     /note="GDP-Fucose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:211385"
ORIGIN      
        1 attaaagaga gatagataag attaggagca agttttcttg attccattta aattatatat
       61 aattaataat taattattat ccttttatgt tgtactatca gtagctacat ctatttatct
      121 atttattgga tataatttga taattgaaat agttttttgg gtggatctga tttaagaaaa
      181 aaatgggaat agatccgaga caaatagttg caggtgtgct tacagtcacc atgttcctca
      241 tgcttggtaa catggtcaaa cgtcaacact ttgatgctcc aatttctcat catgtgaacc
      301 gtgctggatt gacccaaagt tttgacgaaa aggattcgga tagaagcgtt gcagtcgatg
      361 gtgacagttc ttggaaggca gaatctgctg gtctcaaacc ttgttggtca aagtcaattt
      421 tggaagaacc ggatgagact aaaggatacg tcactttctc attaaccaat ggacccgaat
      481 accatgtctc ccagattgct gatgcagtag tagtagcgag atacctaaag gcgacacttg
      541 ttgttcccga cattagagga agccaacctg gcgatcggag gaactttgga gatatttatg
      601 acatcgagaa gtttgttagt agcttagacg gagtagtgaa agtagtaaaa agtcaaccat
      661 ccgagttatc atcaaagaat cttgctgttt taagaatccc taatcgtttg accgaagact
      721 acattgtgga aaatatcgta cctgttttca aaagcaaggg aaacgtacga ctagcaactt
      781 atttcccatc tgtgaacatg aaaaagggta aagatgaaca agaggagaaa gttacagtcg
      841 gatgtttggc gatgtttgga acacttgagc tacaaccgga gattcgtgaa gtggttgact
      901 cgatggttga ccggctcaaa acgttgagcc agaagtcaga cggtcagttt gtagcagttg
      961 acgtaaggct cgatatgttg aaccataagg gttgtcaagg ttctaaaaaa tgctatggcc
     1021 cacaagagat tgcgttgttt ttgaggaaga tcggatttag taagaacagc gctgtttatt
     1081 tgacacaatc tcggtgggat agccaacttg ataccatgaa agacctcttc ccaaaaacgt
     1141 acacgaagga agggattatg ccaatggaga agaagcaaaa gtttttggga tcagatgctt
     1201 ctgagtacga aaaggtgata gatttctacg tatgttcaga gagcgatgta tttgtaccag
     1261 caatatctgg tttattttat gcaaacgtag ccggtaaaag aataggttta gggaagactc
     1321 agatacttgt tcctgatgac gatgcttcag cttcgtctgc tgctgggaac tacatttctc
     1381 gttatgtatc aaagaagaac cacatggcgt actcctgttt ctgctagcta gctttccatt
     1441 taatagtatg gaataaaagt atggtaccat agtttgatca agactgtttt tgttatattc
     1501 gttttgatat atttataaaa gtatagcaac aggcagtgat tggtgtgttg taaaacagtg
     1561 tggtcaagtt ttgtattgtt ctgaatttag gtgtaataca atgagtaaaa aacatat
//
LOCUS       XM_071885895             892 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides replication protein A 32 kDa
            subunit A-like (LOC139903967), mRNA.
ACCESSION   XM_071885895
VERSION     XM_071885895.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..892
                     /gene="LOC139903967"
                     /note="replication protein A 32 kDa subunit A-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139903967"
     CDS             52..864
                     /gene="LOC139903967"
                     /codon_start=1
                     /product="replication protein A 32 kDa subunit A-like"
                     /protein_id="XP_071741996.1"
                     /db_xref="GeneID:139903967"
                     /translation="MMFSESQFDGSSQIASSPATAGNRDTFGLVPLTVKQISEALHSG
                     DDKSNFSISGADVVNVTVVGMVSNIVERNSYVTFTIDDGTGNLECKRWLNQPFDKMQI
                     EAISEGIYVHVDGHLKSFKGERHVDVFSVRPVTNFDEITFHFIACIHNHLRTTKDQKT
                     QGNGTNFTGNQSSTPNTPIQNGTNGSKSTLSSQSSVPFNVDGLKGFDQMVLAYLQFPA
                     NYEKEKGIHTDELAQKLKLPHNKIMETIRTLEEEGMIYSTIDESHYKATCSS"
     misc_feature    70..852
                     /gene="LOC139903967"
                     /note="Single-stranded DNA-binding replication protein A
                     (RPA), medium (30 kD) subunit [DNA replication,
                     recombination, and repair]; Region: RFA2; COG5235"
                     /db_xref="CDD:227560"
     misc_feature    250..507
                     /gene="LOC139903967"
                     /note="A subfamily of OB folds corresponding to the OB
                     fold of the central ssDNA-binding domain (DBD)-D of human
                     RPA2 (also called RPA32). RPA2 is a subunit of Replication
                     protein A (RPA). RPA is a nuclear ssDNA-binding protein
                     (SSB) which appears to be...; Region: RPA2_DBD_D; cd04478"
                     /db_xref="CDD:239924"
     misc_feature    order(250..252,292..294,298..300,379..381,436..441,
                     445..447,457..459,463..477,481..483,487..489,493..498,
                     505..507)
                     /gene="LOC139903967"
                     /note="trimerization core interface [active]"
                     /db_xref="CDD:239924"
     misc_feature    order(250..252,292..294,298..300,379..381,457..459,
                     463..465,469..474,481..483,493..495,505..507)
                     /gene="LOC139903967"
                     /note="RPA2 DBD-D/RPA3 interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239924"
     misc_feature    order(250..255,280..291,295..297,313..321,325..327,
                     376..378,397..405,424..432)
                     /gene="LOC139903967"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239924"
     misc_feature    order(436..441,445..447,466..468,475..477,487..489,
                     496..498,505..507)
                     /gene="LOC139903967"
                     /note="RPA2 DBD-D/RPA1 DBD-C interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:239924"
ORIGIN      
        1 cacattcaat ctcatcctct cttctgcatc aattaaacgg ttacgatcat catgatgttt
       61 tctgaaagtc aattcgacgg aagttctcaa atcgccagtt ctccggcgac cgctgggaat
      121 cgagatacgt ttggactagt accgctgacc gttaagcaaa tcagcgaagc tctacactcc
      181 ggtgacgata aatctaattt cagcatctcc ggtgcagatg ttgttaatgt tactgtggtg
      241 ggaatggtgt caaacatagt ggaaagaaat agttatgtta catttactat tgatgatgga
      301 actggaaatt tggaatgcaa aagatggctt aatcaaccat ttgataaaat gcaaattgag
      361 gcaattagtg aagggattta tgtccatgtt gatggacatc tgaaaagttt taaaggtgaa
      421 aggcatgttg atgttttctc tgttaggcct gtgacgaatt ttgatgagat caccttccat
      481 ttcattgcgt gcatacacaa ccatctgcgt actactaaag atcagaagac acaagggaat
      541 ggtacaaact ttactgggaa tcaaagttca accccaaaca cacccatcca aaatggtact
      601 aatggctcta agtccaccct ttcaagtcag tcatctgtac cgttcaatgt tgatggacta
      661 aaaggctttg atcaaatggt tcttgcttat ctccagtttc ctgctaacta tgaaaaggag
      721 aagggcatcc atacagatga acttgcacag aagctcaaac ttcctcataa caagatcatg
      781 gaaactataa gaacgttaga agaggaaggc atgatatact caacaattga tgaaagtcac
      841 tacaaagcaa catgtagcag ttgatgcaga ccaacactac tattttgcga tg
//
LOCUS       XM_071885896            2114 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mannosyl-oligosaccharide
            1,2-alpha-mannosidase MNS1-like (LOC139903968), mRNA.
ACCESSION   XM_071885896
VERSION     XM_071885896.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2114
                     /gene="LOC139903968"
                     /note="mannosyl-oligosaccharide 1,2-alpha-mannosidase
                     MNS1-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139903968"
     CDS             152..1873
                     /gene="LOC139903968"
                     /codon_start=1
                     /product="mannosyl-oligosaccharide 1,2-alpha-mannosidase
                     MNS1-like"
                     /protein_id="XP_071741997.1"
                     /db_xref="GeneID:139903968"
                     /translation="MARSSRSSSSIRWRYLNPAYYLKRPKRLALLFMAFVFVSFFVWD
                     RQTIVMKHEEELSILKEEVERLQNELGELKHEGGVSVTKNNASTKHVDVTKKGGLASD
                     PIEAERREKVKDAMVHAWSSYEKYAWGHDELQPQSKNGVDSFGGLGATLIDSLDTLYI
                     MGLDEQFQRAKEWVADSLDFNKNYDASVFETTIRVVGGLLSAYDLSGENVFLEKAKDI
                     ADRLLPAWSTPSGIPYNIINLAHGNAHNPGWTGGDSILADSGTEQLEFIALSQRTGDP
                     KYQQKVENVILELNKTFPADGLLPIYINPHRGTTSHSTITFGAMGDSFYEYLLKVWIQ
                     GNKTADVKLYREMWETSMKGLLSLVRKTAPSSFTYISEKIGNSLIDKMDELACFAPGM
                     IALGSSGYGPDESTKFLNLAEELAWTCYNFYQSTPTKLAGENYFFHSGQDMTVGTSWN
                     ILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRVEAGYVGLKDVNTGMKDNMM
                     QSFFLAETLKYLYLLFSPPSVISLDEWVFNTEAHPLKIVPRLTQRKPNNVRVRARKEG
                     RFGGSRI"
     misc_feature    494..1789
                     /gene="LOC139903968"
                     /note="Glycosyl hydrolase family 47; Region:
                     Glyco_hydro_47; pfam01532"
                     /db_xref="CDD:460241"
ORIGIN      
        1 tatttctact aaattctatc ttatccttta ggaaatctaa tttcaattcc ttacatcact
       61 aaatctgttg ttgtatcata tattttaatt atattaatat acacatacaa acatacacac
      121 acacgtacac ttgtaactga ctgaaagaat aatggcgagg agcagcagat cgtcatcgtc
      181 gatccgatgg agatacttga atcccgctta ttacttgaaa cgaccaaaac gacttgccct
      241 actttttatg gcatttgttt ttgtgtcctt ttttgtatgg gatcggcaaa ctattgtaat
      301 gaaacatgag gaagagctct caattttgaa agaagaagtc gaacgtttgc aaaatgagct
      361 aggagagtta aagcacgaag gtggcgtttc agttacaaag aacaatgctt ccaccaaaca
      421 cgttgatgta actaagaagg gtggtcttgc cagcgacccc attgaggccg aacgaagaga
      481 aaaagtaaaa gatgctatgg ttcatgcatg gagctcgtat gaaaagtatg cttggggcca
      541 tgatgagctt cagcctcaat caaagaatgg tgtggatagc tttggtggtc ttggtgcaac
      601 tttaattgac tctcttgata ccttatatat aatgggcctg gatgagcagt ttcaaagggc
      661 taaagagtgg gttgcagact ctttggactt caataaaaat tatgatgcca gtgtgtttga
      721 aacgaccata agagttgtgg gtgggcttct tagtgcctac gatctatctg gggaaaatgt
      781 cttccttgaa aaggcaaaag acatagctga caggttgctc cctgcatgga gtacaccttc
      841 tggtatacct tacaatatca tcaacttggc tcatggtaat gcacacaacc ctggttggac
      901 tgggggggat agtatcctgg cagattcagg gacagagcag ctggagttta ttgcactatc
      961 ccagcggact ggagatccaa agtatcaaca aaaggtagag aatgttattt tagagctgaa
     1021 taagacattt cctgctgatg ggttgctacc catttatata aatccacaca gaggaacaac
     1081 atcacattca accattactt ttggggccat gggtgatagt ttctatgagt atctacttaa
     1141 agtttggata caagggaaca aaaccgcaga tgtgaagctt tatagagaaa tgtgggagac
     1201 atcaatgaaa gggctattga gtttggtccg taaaactgca ccttcgtctt ttacatatat
     1261 ttccgagaag ataggaaatt ctttaattga caagatggat gagctagcat gctttgctcc
     1321 aggaatgata gcattagggt catctggtta tggtcctgat gaatcaacaa agtttttaaa
     1381 tttggcagaa gagcttgctt ggacatgtta taacttctat cagtcgacac ctacaaagtt
     1441 ggccggagag aattattttt tccattcagg gcaggacatg actgtgggta catcatggaa
     1501 catattgagg ccagagacag ttgagtcgct cttttaccta tggcgtttga ctggtaataa
     1561 gacgtatcaa gaatggggat ggaacatatt tcaagcattt gaaaagaatt cgcgtgtaga
     1621 ggcgggatat gttggactta aggatgttaa tacaggtatg aaagacaata tgatgcaaag
     1681 cttctttctc gcagaaacgt taaaatattt gtatcttcta ttctcgcctc catcagttat
     1741 atcattggac gagtgggtat tcaatacaga agctcatcct ttaaaaatcg tccctcgact
     1801 tactcaacgt aaacctaata acgttagagt acgtgctagg aaagaaggtc gttttggtgg
     1861 ttctaggatc taggagtgtt tgtggaaatt ttggcaaagc acaagattag aaggatttat
     1921 acggctctcg ttggccatgt gaaataaatt gaactttgcg gagatggtca tttcatttca
     1981 ctgtacttgt tttatagtta tattattctt aatagattag gttgtattag agagcaatac
     2041 aattgtagtt atgctgtctg tattccattt tgaccaactt taccgtatac tggaatatga
     2101 atttactatt tcta
//
LOCUS       XM_071885897            1420 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903969), mRNA.
ACCESSION   XM_071885897
VERSION     XM_071885897.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1420
                     /gene="LOC139903969"
                     /note="uncharacterized LOC139903969; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139903969"
     CDS             54..1166
                     /gene="LOC139903969"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071741998.1"
                     /db_xref="GeneID:139903969"
                     /translation="MEALSSSSILPVHQETHFRKPPAYLKTNVISFPKNTLIAAVNGQ
                     VSGDTGKNDQQLHLHDNNSNSSVFEPVSSSLGGTGKGYSKEDLYKEKYEIRNGGGTRA
                     GLFRTPISGGVQSATSVHDLPKPALAVRNLMEQARFAHLCTVMSRMHQRSEGYPFGSL
                     VDFAPDPLGHPIFSFTQLGIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDVYPLT
                     EDEQEWAHKQYIAKHQQAPSQKWGNFYYFRMHNISDIYFIGGFGTVAWVNVKEYESLQ
                     PDAIAVDGGEQNLKELNAMFSKPLKDLFSLESEVDDVSLISIDSKGTDIRVRQGAQFN
                     VQRLVFEEWDGIKTLEDAKEALGKLVNKGGVFTVHK"
     misc_feature    414..1133
                     /gene="LOC139903969"
                     /note="Putative heme iron utilization protein, contains
                     PNPOx domain [Inorganic ion transport and metabolism];
                     Region: HugZ; COG0748"
                     /db_xref="CDD:440511"
ORIGIN      
        1 aagctgccgt attctttctc ttctcgaaat ccctattcca tacaactctc gccatggaag
       61 cactttcaag ctcttcaatc cttcctgttc atcaagaaac acatttccgt aaacctcctg
      121 cttacctgaa aactaacgtc atatcttttc cgaaaaatac gcttatcgcc gccgttaacg
      181 gtcaagtttc cggtgacacc ggaaaaaacg atcaacagtt acatctccat gataataata
      241 gtaacagtag tgtgtttgaa cctgtctctt cttccttggg tggtacaggt aaaggttata
      301 gcaaagagga cttgtataaa gaaaaatatg aaattaggaa tggtggaggc actagagctg
      361 gccttttcag aaccccgatt tcggggggag tgcagagtgc cacatcagtt cacgacttac
      421 ctaaaccagc tttggcagtt cgtaatctga tggaacaggc caggttcgct cacctgtgta
      481 ctgtaatgtc ccggatgcat caacgaagtg aaggataccc atttggttct ctggtagatt
      541 ttgccccaga tccattggga catccaattt tttcctttac acagttgggt atacacacac
      601 ggaatctgtt agctgatcca aggtgtacat tagtggttca gatacctgga tggagtggct
      661 tgtcaaatgc aagggttaca atttttggcg acgtttatcc ccttacagaa gatgagcagg
      721 agtgggcaca taagcagtat atagctaaac accaacaggc accttcacag aagtggggaa
      781 acttttacta ctttaggatg cataatataa gtgatatata ttttattgga ggttttggaa
      841 ctgttgcttg ggtcaatgtc aaggagtacg agtctcttca acctgatgca attgctgttg
      901 atggtggtga gcagaacctg aaggagctga atgccatgtt ttctaagcct ctaaaagatc
      961 tattttcgtt ggagagtgag gtggatgacg tttcgcttat atctatagat agcaagggaa
     1021 ccgacattcg tgtccgtcaa ggtgcacagt ttaacgtaca aaggttggtt tttgaagaat
     1081 gggacggaat caaaacttta gaggatgcaa aagaagcatt ggggaagctg gtaaataaag
     1141 gcggagtgtt caccgtgcac aaataaaaac tatgagagat ggctcgtgtg tcttactaaa
     1201 atgtaacgtc taacacctgg gatttggatt gataaactat gtagaaggtt aaataaggtt
     1261 agatggagta gttttggatc cataatcgca tttagcgtgt taaatttgca tcaatgaatg
     1321 atgaatttga caagaaaata gtcccatgat tgggctagtt gtactatgct taatcaatga
     1381 aagatgttga cgaatatata aaatgtgcag ctggtgtttt
//
LOCUS       XR_011778607             966 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903970), ncRNA.
ACCESSION   XR_011778607
VERSION     XR_011778607.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139903970"
                     /note="uncharacterized LOC139903970; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903970"
     ncRNA           1..966
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903970"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139903970"
ORIGIN      
        1 atgaagccaa agccattaat ggtgcgctac ttttagtaca acagtgggtg tataaaagaa
       61 ttccatccat cgcgccaatt ctcaaaaatg atgtacgcat tattccagag gacctggcac
      121 ctaaccagat tccaccgatt cgtgcaccct atggttcaag gtggcatggt aaacagacaa
      181 acaaaagtac gccaacacat gtattgccta cgtatcgctc cgtacttgcg ccgttaacgc
      241 ctagacagtt tatatgacaa ccatatgatg atgtgttact gagccgacta ccccgtcagt
      301 gcacagctga cagagcctta tggtcatacc gtggcgcgat tatattctgg gctactattg
      361 agacacatct atcggatcgg gtctgcaagc agtttgaatg gagtcagcct attccaggtg
      421 ttgaacactt gcttcccgct cagatgcatc attaattaca caagacaaac ctttgcatga
      481 aacaaagtgc tgatatgagg gctattgccc cgcacgtcac gtacattgga caatggaatg
      541 actgagccaa ccgttaggga tggtgggggt gtgagtaggg attactttga ctggtactag
      601 gctcgcacag ttgtgcacat tacagatccc tgaatcggtg agggcaccaa cacatatcct
      661 aattgggcag tgactactaa tgtatatgag gagtggcttt ggaggatgca agatatgaca
      721 tttgcacaaa tgcaaccaaa cagtcaacct aacccgcaag cattttatga catgccacat
      781 cagttacttt catacgcgca tcataatcag ctaggtgctc catttgaata ctatccgtca
      841 taaaacttcg agttaccagc taatgattac ggtgatcagg cgcattatca tgatcctcgc
      901 caaacgtatc ataaccctca tgacacatac agtacccctc gaaacacata caatacccat
      961 caaaac
//
LOCUS       XM_071885898             673 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lachrymatory-factor
            synthase-like (LOC139903971), mRNA.
ACCESSION   XM_071885898
VERSION     XM_071885898.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..673
                     /gene="LOC139903971"
                     /note="lachrymatory-factor synthase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139903971"
     CDS             7..471
                     /gene="LOC139903971"
                     /codon_start=1
                     /product="lachrymatory-factor synthase-like"
                     /protein_id="XP_071741999.1"
                     /db_xref="GeneID:139903971"
                     /translation="MDEKTKSSKWEGKVSRELETIKADQIWPLFEDFCTIHKWLPTIN
                     TCHHVEGVHGQPGLVRYCESSSNDIIKWCHEKLISIDPVERNLSYEVKENNIGFKHYV
                     AEQKVIEIESGCKIEWLFVADPIEGWGLEDLFGYIESSLNGMVDRMEKVHIL"
     misc_feature    34..453
                     /gene="LOC139903971"
                     /note="Pyrabactin resistance 1 (PYR1), PYR1-like (PYL),
                     regulatory component of abscisic acid receptors (RCARs),
                     and related proteins; Region: PYR_PYL_RCAR_like; cd07821"
                     /db_xref="CDD:176863"
     misc_feature    order(40..42,46..48,52..54,82..90,94..99,124..126,
                     130..132,142..144,178..180,184..186,190..192,196..198,
                     214..216,229..231,235..237,244..246,265..267,271..273,
                     277..279,298..300,307..315,319..321,325..327,352..354,
                     358..360,364..366,370..372,403..408,409..417,421..429,
                     436..438)
                     /gene="LOC139903971"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:176863"
     misc_feature    order(127..132,136..138,199..204,295..300,400..405,
                     409..411,421..423)
                     /gene="LOC139903971"
                     /note="protein interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:176863"
     misc_feature    order(199..204,208..210)
                     /gene="LOC139903971"
                     /note="gate; other site"
                     /db_xref="CDD:176863"
ORIGIN      
        1 agtctcatgg atgaaaaaac caaatcttca aaatgggaag gcaaagtaag tagagaacta
       61 gaaaccataa aagctgacca aatatggcca ctttttgaag acttttgcac catacacaaa
      121 tggcttccaa ctataaacac atgccaccat gttgaaggag ttcatggtca gccaggtctt
      181 gtacgttact gcgaatcgtc gtctaatgat atcattaaat ggtgtcacga aaagttgata
      241 tcaattgatc ctgttgaaag gaatttgagc tatgaggtta aagagaataa catcgggttt
      301 aagcactatg tggctgagca aaaagttatt gagatcgaaa gtgggtgtaa gatcgagtgg
      361 ttgtttgttg ctgatccgat tgaagggtgg ggattagaag atttgttcgg ttatattgaa
      421 tcgtcattga atggtatggt agatagaatg gagaaggttc acatcttgta aagattttgt
      481 tttaagaaga tttatgctgt cattttctat ggggtggtta atgctgcttg gatataagtt
      541 gaaggactaa aagtgtgaag ttttatactt ggggaccaag ttgcaaggct ggaagcttta
      601 atttatatat acccgttttt atttatttta attcatcact ctcatattat catcatcata
      661 ttcatattct tct
//
LOCUS       XR_011778608            1231 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903972), transcript variant X1, ncRNA.
ACCESSION   XR_011778608
VERSION     XR_011778608.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1231
                     /gene="LOC139903972"
                     /note="uncharacterized LOC139903972; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903972"
     ncRNA           1..1231
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903972"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139903972"
ORIGIN      
        1 aggtggctat tgctatggag caagctgcac tatcagatat gagtattttg ttaaatggac
       61 gtatctgaat gttgatttct attcagggct tatcgtaaga gtcgcttgat gatcctgacg
      121 caaagatcat gaggcccaca cagggtcatg atttgtacaa atccaagcca gtccgtgata
      181 agtaaattgt acgcattatt gggaagcaac ggccaggcaa cttgcatcgg ggtagcctgg
      241 taggaggtac ttgctggttt cccaacctat ttttaaagat atcaatctac agaactgggt
      301 tgaggatcta ttctggaagt agcttgactt tgacaatcct gggtaaaatg caaggtgtgt
      361 gcattcttct ccatatcaaa aaagtcaagt gtgaccacta aaacataaat tagtagtgga
      421 gtttgggctt cctgaatcag ggcaaattcc aatcgatgat caggatgttc agatcgttag
      481 ttcatgtact ttaactaatg aaatagactc cgtgcgactg ctttcttctg ctaatcaaga
      541 gggcagttgt ggttgatcag ggacttgagg ctgatgtcca aggtgacatt tcaagacaca
      601 ttttgaagaa ttaattagta gcgggctttg acaacgtctt atgtctctta taaagaaata
      661 aagggagtca ttttttcacc caagagtaga aaaaagacag cccttccgaa ggaactcaat
      721 cgagaagaac cagctggttt tggttggccc agctctgaac gtcatattct tgacttgtgg
      781 gttgctcttg tagaaaacga gctgttgttt gcagggagag actcattctt gatcgcatgt
      841 agcctttttt tcccctgtac aatttctttg atatccaatg ctctcagtgc atcgcctgac
      901 aaaatgtcta tctcgtcaca ggatgcttca tttagggcac gatttccatg agttatggct
      961 attgagaatg atcagacaat tgagggctgt atgaactgtg ttagacttgc ttgggctacg
     1021 tatttgatga taatacaaca aagatgtaac ggatgtatgg gacacaatta atgacacgag
     1081 aaatattaat tcatgcctgg aggttatttt tccgagcaac gtttttcagt ttctgcttaa
     1141 cccagttctt tgaactcttg cttatcagaa tgatgacgag gatatgatct acatgtataa
     1201 tgcatacttg cacaagctga taacatcttt t
//
LOCUS       XR_011778609            1228 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903972), transcript variant X2, ncRNA.
ACCESSION   XR_011778609
VERSION     XR_011778609.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1228
                     /gene="LOC139903972"
                     /note="uncharacterized LOC139903972; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903972"
     ncRNA           1..1228
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903972"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139903972"
ORIGIN      
        1 aggtggctat tgctatggag caagctgcac tatcagatat gagtattttg ttaaatggac
       61 gtatctgaat gttgatttct attcagggct tatcgtaaga gtcgcttgat gatcctgacg
      121 caaagatcat gaggcccaca cagggtcatg atttgtacaa atccaagcca gtccgtgata
      181 agtaaattgt acgcattatt gggaagcaac ggccaggcaa cttgcatcgg ggtagcctgg
      241 taggaggtac ttgctggttt cccaacctat ttttaaagat atcaatctac agaactgggt
      301 tgaggatcta ttctggaagt agcttgactt tgacaatcct gggtaaaatg caaggtgtgt
      361 gcattcttct ccatatcaaa aaagtcaagt gtgaccacta aaacataaat tagtggagtt
      421 tgggcttcct gaatcagggc aaattccaat cgatgatcag gatgttcaga tcgttagttc
      481 atgtacttta actaatgaaa tagactccgt gcgactgctt tcttctgcta atcaagaggg
      541 cagttgtggt tgatcaggga cttgaggctg atgtccaagg tgacatttca agacacattt
      601 tgaagaatta attagtagcg ggctttgaca acgtcttatg tctcttataa agaaataaag
      661 ggagtcattt tttcacccaa gagtagaaaa aagacagccc ttccgaagga actcaatcga
      721 gaagaaccag ctggttttgg ttggcccagc tctgaacgtc atattcttga cttgtgggtt
      781 gctcttgtag aaaacgagct gttgtttgca gggagagact cattcttgat cgcatgtagc
      841 ctttttttcc cctgtacaat ttctttgata tccaatgctc tcagtgcatc gcctgacaaa
      901 atgtctatct cgtcacagga tgcttcattt agggcacgat ttccatgagt tatggctatt
      961 gagaatgatc agacaattga gggctgtatg aactgtgtta gacttgcttg ggctacgtat
     1021 ttgatgataa tacaacaaag atgtaacgga tgtatgggac acaattaatg acacgagaaa
     1081 tattaattca tgcctggagg ttatttttcc gagcaacgtt tttcagtttc tgcttaaccc
     1141 agttctttga actcttgctt atcagaatga tgacgaggat atgatctaca tgtataatgc
     1201 atacttgcac aagctgataa catctttt
//
LOCUS       XM_071885899            2433 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides V-type proton ATPase
            catalytic subunit A-like (LOC139903973), mRNA.
ACCESSION   XM_071885899
VERSION     XM_071885899.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2433
                     /gene="LOC139903973"
                     /note="V-type proton ATPase catalytic subunit A-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 31 Proteins"
                     /db_xref="GeneID:139903973"
     CDS             121..1992
                     /gene="LOC139903973"
                     /codon_start=1
                     /product="V-type proton ATPase catalytic subunit A-like"
                     /protein_id="XP_071742000.1"
                     /db_xref="GeneID:139903973"
                     /translation="MPSAYGARLTTFEDSEKESECGYVRKVSGPVVIADGMAGAAMYE
                     LVRVGHDNLIGEIIRLEGNSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIF
                     DGIQRPLKTIAKRSGDVYIPRGVSVPALDKDILWEFQPKKIGEGDAITGGDLYATVFE
                     NSLVEHHIALPPDAMGKVTYVAPAGQYALKDTVLELEFQGVKKQYTMLQTWPVRTPRP
                     VASKLSADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVY
                     VGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGI
                     TIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERA
                     GKVKCLGGPDRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPS
                     VNWLISYSKYSTALESFYDKFDSDFINIRTKAREVLQREDDLNEIVQLVGKDALAETD
                     KITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDG
                     QKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDVLTGKFKKLYEDLTAGFRNLEDETR"
     misc_feature    178..1956
                     /gene="LOC139903973"
                     /note="V-type (H+)-ATPase V1, A subunit; Region:
                     V-ATPase_V1_A; TIGR01042"
                     /db_xref="CDD:273411"
ORIGIN      
        1 attgaggtga tccaccactc tacatcacaa ttcacgttgc atctgtgaac tgccaatcgt
       61 gctgaaaccc taactcgtag tatctcacta tctcgataaa tttctaattt tgatttcaat
      121 atgccgtctg cttatggcgc tcgattaacc acgtttgagg attctgaaaa ggaaagtgag
      181 tgcggatacg ttcgtaaggt atcagggccg gtcgtcattg cagatggaat ggcaggggct
      241 gcaatgtatg aacttgtccg tgttggacat gacaatctta tcggggagat tatccgtttg
      301 gaaggaaatt ctgctacaat ccaagtttac gaagaaacag ctgggctgat ggtgaacgat
      361 ccggttctgc ggacacacaa acctctgtca gtggagttgg gccccggaat attggggaat
      421 atatttgacg gtatccagag acctctaaaa actattgcaa aaagatcagg tgacgtgtac
      481 attcctcgtg gtgtatctgt cccagctctc gacaaggata tactttggga attccagcct
      541 aaaaaaatag gcgagggaga tgctattact ggtggagacc tatatgctac cgtgttcgag
      601 aacagtttag ttgaacatca cattgcttta cctcccgatg ccatgggaaa agtaacatat
      661 gttgcaccag ctggtcaata cgcattgaag gacactgtct tggagcttga atttcaaggt
      721 gttaaaaagc aatatacgat gcttcagact tggcctgtac gtacacctcg gccagttgcg
      781 tcaaagcttt ctgctgatac acctcttctt accgggcagc gtgttcttga tgcccttttc
      841 ccctcggtgc ttggcgggac ttgtgccatt cctggtgcat ttggctgtgg gaaaacagtt
      901 atcagtcaag ctctatccaa gtactctaat tcagacactg ttgtttatgt tggttgtgga
      961 gaaagaggaa atgaaatggc agaagtgctt atggattttc ctcaattaac tatgacatta
     1021 cctgatggtc gtgaagaatc tgtcatgaaa cgtactacac ttgtagccaa cacatctaac
     1081 atgcctgtgg ctgctcgtga ggcttcaatc tatacaggaa ttaccatagc cgaatacttc
     1141 agagatatgg gctacaatgt aagtatgatg gcagactcta cctctcggtg ggcagaagca
     1201 ttgcgtgaaa tttctggtcg tctggcggaa atgcctgcgg atagtggtta tcctgcatat
     1261 ctggctgctc gattggcatc tttctatgaa cgtgctggta aagtgaagtg tcttggtggg
     1321 ccagaccgtg atggtagtgt cacaatcgtt ggtgctgtat ctccccctgg aggagatttc
     1381 tctgatcccg ttacatctgc tactctcagt attgttcagg ttttctgggg tctagataag
     1441 aagcttgcac agaggaaaca ttttccttct gttaactggc ttatttccta ctcaaagtac
     1501 tcaacggctc tagaatcttt ctatgataag tttgattcgg atttcatcaa tatcaggacc
     1561 aaggctcgtg aggtgttgca aagagaagac gatctaaatg aaattgtcca gctcgtgggg
     1621 aaagatgcgt tggctgaaac agataaaatc accttggaga ctgcaaaact attgagggaa
     1681 gactatcttg ctcaaaatgc atttacacca tatgataagt tttgtccctt ctacaagtct
     1741 gtatggatga tgcgcaatat tattcatttc tataatctag ccaaccaggc ggtggagcga
     1801 ggagctggta tggatggcca gaagatcact tacacactga tcaagcatcg gttgggtgat
     1861 ctattttacc gcttggtgtc gcaaaagttt gaagatcctg ctgaaggaga ggatgttctg
     1921 actggaaaat ttaagaagct atatgaagat cttactgctg gtttccgcaa ccttgaagat
     1981 gaaactcggt aaacacagta acacgtaata atctctgatg atttgaatat gaacccgagt
     2041 ggcatttttc atcgatcaag agtcagacag agtcagcttc aacgaggttt tgttgtttct
     2101 tagtgcttga aggatgggga ttgtcattag ctgtttgatt tatttattca aagggtgttc
     2161 tgtatcattt gtatttaggt aattatttcc ggatcactgg tttgtgtgtc ttgagagttg
     2221 aaataagcag agcagcatgt agtaaggtta ctctcagaac tcatgttgat ggtactgctg
     2281 ccttatattt ttattacttt cagtatgaat aaataaataa tgaatgaaat tatggctttg
     2341 agtaggtgtt gtaagggtta tgtgcagtct caaatgatct ggactcgcta tgtaatttta
     2401 tatatgctta agtaaattac tttaggcttc tga
//
LOCUS       XM_071885900            1403 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mitochondrial
            adenine nucleotide transporter BTL1 (LOC139903974), mRNA.
ACCESSION   XM_071885900
VERSION     XM_071885900.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1403
                     /gene="LOC139903974"
                     /note="probable mitochondrial adenine nucleotide
                     transporter BTL1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139903974"
     CDS             113..1234
                     /gene="LOC139903974"
                     /codon_start=1
                     /product="probable mitochondrial adenine nucleotide
                     transporter BTL1"
                     /protein_id="XP_071742001.1"
                     /db_xref="GeneID:139903974"
                     /translation="MTPKSQPQQRKGFCTMADAYGVILDSTQTQLHKNLDLVFLGQTN
                     SNNRTKDDSFSFDFQLPDIRSPIAKFVKSREAGEFLSGALAGAMTKAVLAPLETIRTR
                     MIVGVGSKKISGSFLEVIEKQGWQGLWAGNAINMIRIVPTQAIELGTFECVKRVMTSA
                     KEKWSKEDCPSVQIGPVKLSFSLAWLSPVALGGAAAGFVSTLVCHPLEVLKDRLTVSP
                     DVYPNLSVAVQKMYSNGGIGSFYSGLSPTLMGMLPYSTCYYFMYDTIKKSYCTAQNKK
                     SLSRPEMLLIGALSGLTASTISFPLEVARKRLMVGALQGKCPPSIVAALSEIVREQGL
                     IGLYRGWGASCLKVMPSSGITWMFYEAWKDILLGDKYER"
     misc_feature    347..586
                     /gene="LOC139903974"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    665..919
                     /gene="LOC139903974"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    962..1222
                     /gene="LOC139903974"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     polyA_site      1403
                     /gene="LOC139903974"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgacctaaga ataatatctc actgtgtctc tttgaaattg caacgacggt gaccggaaac
       61 caaaaatatc tataaagtta acggtggttg tggggcacac caccttaaca aaatgacccc
      121 taaatcacaa cctcagcaaa gaaagggttt ttgtacaatg gcggatgctt atggtgtgat
      181 tttagactca acgcaaacgc agcttcataa gaatctagac cttgtttttt taggtcaaac
      241 taatagtaac aatcgcacta aagatgattc cttttccttt gattttcaac ttcctgatat
      301 tcgaagtccg atcgcgaaat ttgtgaagtc gagagaggct ggggaatttc ttagtggtgc
      361 tttggctggg gctatgacta aagccgttct tgctcctctc gaaaccatca ggacgaggat
      421 gatagttggt gttgggtcga aaaagatatc tggtagcttt ctggaagtga ttgaaaaaca
      481 aggatggcaa ggactatggg ccggaaatgc aatcaacatg atacgtattg ttccgacaca
      541 ggcaattgaa cttggaacgt ttgaatgtgt taaacgagta atgacttcag ctaaagagaa
      601 atggagcaaa gaagattgtc caagtgtgca gattggtcca gtcaaactaa gtttttctct
      661 tgcatggctg tcaccagttg ccctcggtgg tgcagctgca ggttttgtta gcacactcgt
      721 atgccatcct cttgaagtct taaaggatcg gttaaccgta agcccagatg tttatcctaa
      781 tttgagcgtt gcagttcaga aaatgtatag taatggtggg attggttctt tctattcggg
      841 cctttctcca acgttgatgg gcatgttgcc atacagcact tgctactact tcatgtatga
      901 cacaatcaag aagtcttact gcacggcaca aaacaagaaa tctttaagcc gtccagagat
      961 gcttctgatc ggagcacttt caggtttaac tgcaagtaca atcagtttcc ctttggaggt
     1021 ggcgaggaaa aggctgatgg taggagctct gcaggggaag tgtccaccga gcatcgtggc
     1081 tgcattatcg gaaatagtga gagagcaggg gttgattgga ttatatcgag gatggggcgc
     1141 aagttgtttg aaggttatgc catcatcagg catcacatgg atgttttacg aagcttggaa
     1201 agacatattg cttggtgaca aatatgaacg ataataatgg cataatgcca aattgccaat
     1261 gtatcgtatt attacctttt tttgttaaca agagtgtact atgtcccttg gaattttgtt
     1321 tagagcttag ggagtaaacg gcggttctgt catcatgttt aaccctcttt caagtttttg
     1381 tatgaaaatg tggtgattcg cta
//
LOCUS       XM_071885901             980 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides reticulon-like protein B22
            (LOC139903975), transcript variant X1, mRNA.
ACCESSION   XM_071885901
VERSION     XM_071885901.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..980
                     /gene="LOC139903975"
                     /note="reticulon-like protein B22; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139903975"
     CDS             67..681
                     /gene="LOC139903975"
                     /codon_start=1
                     /product="reticulon-like protein B22 isoform X1"
                     /protein_id="XP_071742002.1"
                     /db_xref="GeneID:139903975"
                     /translation="MDELNTNGGSVPGAGAGVTENDESSGVTRNKKVKKELGSVVIGK
                     GKPLIIGMCATLVYYHCAYRNSSIISLISDVFIVLLCSLAILGLLFRQMNIQVPVDPL
                     EWQISQDTANSLFACLANTVGAAESVLRVAATGHDKRLFLKVVVILYMISALGRLVSG
                     ITIAYAGLSLFCLYILAENSSLFSTCSSKFSWRRDSPNEVSDNQ"
     misc_feature    226..576
                     /gene="LOC139903975"
                     /note="Region: Reticulon; pfam02453"
                     /db_xref="CDD:460562"
ORIGIN      
        1 tcaagtcctc cactccaatg aatcaattct aatcaccatt cttcatcatc aacaaatatc
       61 gcatccatgg atgaactcaa caccaacgga ggttctgttc ctggtgctgg tgccggagta
      121 actgaaaacg acgaatcatc aggagtaacc agaaataaaa aggttaaaaa ggaattagga
      181 tcagtagtaa tcggaaaagg aaaaccgtta attatcggaa tgtgcgctac tttagtttat
      241 tatcactgcg cttatcgtaa ttcaagcatt atttcattaa tttccgacgt attcatcgtt
      301 ctcctctgtt cactcgcaat cctcggcctc cttttccgcc aaatgaacat tcaagtgcct
      361 gtggatccat tggaatggca gatatcacag gatactgcga atagtttgtt tgcgtgtttg
      421 gcgaatactg taggtgctgc tgaatctgtt cttagagttg ctgctactgg tcatgataaa
      481 cgattgtttc ttaaggtggt ggtcattctt tatatgatat cagctttagg aagattggtc
      541 tcaggtatta ccattgctta tgctgggcta agcttgtttt gtctgtacat tcttgctgaa
      601 aattcatcgt tgtttagcac gtgctcgtca aaatttagct ggagaagaga tagtcctaat
      661 gaggtgtcag ataaccaata gcttgaagac tccctgcaat gaagcatctt ctgctaaatt
      721 tcattatgta tctgtgcatt gaggattctg atgagtaggt tcacatataa aatgccttgc
      781 tgaaattttg tacttaatta tctgggatta tagtcaacat caagacagat ttgaatattt
      841 gataaatgat tttctttgta gttttgtaga ttgagtaata aataatgctc taaaaaacct
      901 ctttttcatt gattaggtct tctgaatata ttatccatgt atatatgtat atatacacaa
      961 agcatgccca ttacaggcag
//
LOCUS       XM_071885902             961 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides reticulon-like protein B22
            (LOC139903975), transcript variant X2, mRNA.
ACCESSION   XM_071885902
VERSION     XM_071885902.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..961
                     /gene="LOC139903975"
                     /note="reticulon-like protein B22; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903975"
     CDS             67..660
                     /gene="LOC139903975"
                     /codon_start=1
                     /product="reticulon-like protein B22 isoform X2"
                     /protein_id="XP_071742003.1"
                     /db_xref="GeneID:139903975"
                     /translation="MDELNTNGGSVPGAGAGVTENDESSGVTRNKKVKKELGSVVIGK
                     GKPLIIGMCATLVYYHCAYRNSSIISLISDVFIVLLCSLAILGLLFRQMNIQVPVDPL
                     EWQISQDTANSLFACLANTVGAAESVLRVAATGHDKRLFLKVVVILYMISALGRLVSG
                     LSLFCLYILAENSSLFSTCSSKFSWRRDSPNEVSDNQ"
     misc_feature    226..558
                     /gene="LOC139903975"
                     /note="Region: Reticulon; pfam02453"
                     /db_xref="CDD:460562"
ORIGIN      
        1 tcaagtcctc cactccaatg aatcaattct aatcaccatt cttcatcatc aacaaatatc
       61 gcatccatgg atgaactcaa caccaacgga ggttctgttc ctggtgctgg tgccggagta
      121 actgaaaacg acgaatcatc aggagtaacc agaaataaaa aggttaaaaa ggaattagga
      181 tcagtagtaa tcggaaaagg aaaaccgtta attatcggaa tgtgcgctac tttagtttat
      241 tatcactgcg cttatcgtaa ttcaagcatt atttcattaa tttccgacgt attcatcgtt
      301 ctcctctgtt cactcgcaat cctcggcctc cttttccgcc aaatgaacat tcaagtgcct
      361 gtggatccat tggaatggca gatatcacag gatactgcga atagtttgtt tgcgtgtttg
      421 gcgaatactg taggtgctgc tgaatctgtt cttagagttg ctgctactgg tcatgataaa
      481 cgattgtttc ttaaggtggt ggtcattctt tatatgatat cagctttagg aagattggtc
      541 tcagggctaa gcttgttttg tctgtacatt cttgctgaaa attcatcgtt gtttagcacg
      601 tgctcgtcaa aatttagctg gagaagagat agtcctaatg aggtgtcaga taaccaatag
      661 cttgaagact ccctgcaatg aagcatcttc tgctaaattt cattatgtat ctgtgcattg
      721 aggattctga tgagtaggtt cacatataaa atgccttgct gaaattttgt acttaattat
      781 ctgggattat agtcaacatc aagacagatt tgaatatttg ataaatgatt ttctttgtag
      841 ttttgtagat tgagtaataa ataatgctct aaaaaacctc tttttcattg attaggtctt
      901 ctgaatatat tatccatgta tatatgtata tatacacaaa gcatgcccat tacaggcagc
      961 c
//
LOCUS       XM_071885903            1663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903976), mRNA.
ACCESSION   XM_071885903
VERSION     XM_071885903.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1663
                     /gene="LOC139903976"
                     /note="uncharacterized LOC139903976; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903976"
     CDS             253..768
                     /gene="LOC139903976"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742004.1"
                     /db_xref="GeneID:139903976"
                     /translation="MADNDGWFKRPDVCDYDYHDVYDTYKELFAINVHHHGQFICNPK
                     RQYVGGMLNPFDFVECFTFSMDNLNAIIKEIGFSGGEAMYYHFRIPCIDLDNGLCPLV
                     TEHEHDVVKMLSYIPKYQCIDVYVEHGFTCIGRGSLIDEIDIEFAISETVSKGLKLCE
                     DGSEDGSEDDG"
ORIGIN      
        1 atccctgtat taacaaactg tattaacaaa tgtgctcaaa tcgtccttaa taggtaaata
       61 aggtcccaat ttaatccctt ggtaaacgtc tgttaagaat gtcccgttag ttgcatacca
      121 tgtgatagtc acgtgatttg aaaaaaccct ttcatattcg atcagattgt atgtatatac
      181 tgtttcatta atattcgtac gttcaccttc catacacaac tcagtcgatc ctgtctacag
      241 catacatcat ccatggcaga taatgatggt tggtttaaga gacccgatgt ctgtgattac
      301 gattatcatg atgtctatga tacctataaa gaactttttg ccatcaatgt acatcatcat
      361 ggtcaattca tctgtaaccc taaaagacaa tatgttggtg gaatgttgaa tccatttgat
      421 tttgttgaat gttttacttt ttctatggac aacttaaatg caattataaa ggagattggt
      481 ttttctggtg gtgaagctat gtattatcat tttagaatac cttgcattga tttggataat
      541 ggattgtgtc ctttagttac agaacatgaa catgatgttg ttaagatgtt aagttacatt
      601 cctaagtatc aatgtattga tgtgtatgtt gaacatgggt ttacatgtat aggaagagga
      661 agtttgattg atgaaattga tatcgagttt gcaataagtg aaactgttag taagggttta
      721 aagttatgtg aagatggtag tgaagatggt agtgaagatg atggataaga ttatgatgat
      781 gagattaatg atctagagtt aaaaccactc aaagtaattg atactgatga tgtaaatgct
      841 gaagcagaag gtgtggactt tgatgatttt gattgtggaa atgagcgtga caaagtggat
      901 atcgaaagaa agttgaggtt gaaagacata agatcaatta atgaagatga aatagtgaaa
      961 gtgtgttatc acaaatttta tgttgggcaa gaattttcaa ctacaaaaga aattaaagat
     1021 agggtaagac tacatgcaat tgaaacaaga agggatttga aaccagtgaa gaatgatttg
     1081 atgagagtaa gagttagacg ttttggaatg gtagtagaca acaacggcca ggctatttgc
     1141 ccttggactt tacatgcttc aaagggtaaa aatcatgaca cattgattgt caagacctta
     1201 catgaagaac atacttgtca acaaaagagg aaacttaaac aattatcatc tgctttatat
     1261 ccaaacaaat tggtgaaatc ctagtagctg atccagatct taaggcatgt gcaatttaag
     1321 aaatcatgac cacaaaatat gaattggggg tgaaaacgat ggctgcatat agggccatgt
     1381 caaaggctaa gaaagtaatt attggtgaca acgtgaaaca atattcaaga ctttattgct
     1441 tggagttgca gaaaataaat ccaaacacta ctactgtaat agaagtacat ggaaaagtaa
     1501 aacatgtaaa aagtatggtg tgatggaaca taattcaagg ggttgtggaa aagaaggtgc
     1561 aagtaaaaga aaagcaggtt caagtaaagg aaaagcagtt gcaagtaaag gaaaaggagc
     1621 tgcaagtaca agtcaaggtg ttgcaagtca tggtgttgca agt
//
LOCUS       XM_071885904            1290 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxisomal adenine
            nucleotide carrier 1-like (LOC139903977), mRNA.
ACCESSION   XM_071885904
VERSION     XM_071885904.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1290
                     /gene="LOC139903977"
                     /note="peroxisomal adenine nucleotide carrier 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins"
                     /db_xref="GeneID:139903977"
     CDS             149..1096
                     /gene="LOC139903977"
                     /codon_start=1
                     /product="peroxisomal adenine nucleotide carrier 1-like"
                     /protein_id="XP_071742005.1"
                     /db_xref="GeneID:139903977"
                     /translation="MGGGIDMESLVDATAGAIGSLVSTTILYPLDTCKTKYQAELRTP
                     TLRKYRNLSDVLWEAISKRQVLSLFQGLGTKNLQSFVSSFIYFYGYSYFRRMYIERSG
                     YKSIGTKANLLIAAAAGACTVAITQPLDTAASRMQTSDFGKSKGLWKTLSEETWGEAF
                     DGLGISILLTINPAIQYTAFDQLKQRLLEGKVGNPQSLSAFTAFLLGAVSKCAATCLT
                     YPAIRCKVMIQAAESSEDSDDESEVKARKTVSGALYAIWNKEGLLGFFKGLRAQILKT
                     VLSSALLLMIKEKITKSTWVLFLGIRRFLFLSRSRSNSS"
     misc_feature    164..451
                     /gene="LOC139903977"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    734..1018
                     /gene="LOC139903977"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
ORIGIN      
        1 atcgtcatct catctttttg gtagacaaga taaaatccca taaagttcca caccttctta
       61 cttcaagatt tttacaatca atcaattaat ttttcgcaca aaaagctgag agcttgatta
      121 gttcattact actccaatta ataaagaaat gggtgggggg attgatatgg aatcattggt
      181 ggatgcaaca gcaggtgcaa ttggatctct agttagtact actatcttgt atcctttaga
      241 tacctgtaaa accaagtacc aagctgaatt acgtacccca actcttagaa aatacaggaa
      301 tctgtctgat gttctgtggg aagctatatc caaacgacag gttctttctt tgtttcaagg
      361 cctagggaca aagaacctgc agtcgtttgt ttcatcgttt atatactttt acggatatag
      421 ttactttagg cgaatgtaca ttgagaggtc tggatacaag tctattggaa ccaaagctaa
      481 cttgcttatt gctgctgctg ctggtgcttg cactgttgca ataacccagc ctttggatac
      541 agctgcatca cgaatgcaaa caagtgactt tggaaagtca aaaggactat ggaagaccct
      601 ctcagaggaa acctggggag aggcatttga tggactcggg atatcaattt tgcttacaat
      661 taatccagca attcagtaca cggcatttga tcaactgaaa caacgactat tagagggaaa
      721 ggtaggcaac ccgcagtcgc tttctgcttt caccgccttt cttttagggg ccgtctcaaa
      781 gtgtgctgct acctgcttga cgtaccctgc tatcagatgc aaagtaatga ttcaggctgc
      841 agagtcaagt gaagatagcg acgatgaatc agaagtaaaa gcaagaaaaa cggtatctgg
      901 ggcactttat gctatatgga ataaagaagg gttgttagga tttttcaaag gtttgagagc
      961 tcaaatcctg aaaaccgtgc taagttcagc gttgcttttg atgattaaag aaaagatcac
     1021 aaagagcaca tgggtcctgt ttctgggaat aaggagattc ttgtttttga gcagaagcag
     1081 gtcaaacagc tcttaaacaa agatggattc tatatgtgct aaaactagta taagaaccaa
     1141 atgcggtgtg gtaaaagatt atatttatta ttgcattaag ccattaagtt tgttttatat
     1201 gttactttgc ttgagttaat acatgattat gcgagaattt tagtattaat tatttgtcga
     1261 tagtacgttt agttagtaac aacacaaatt
//
LOCUS       XM_071885905            5670 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903978), transcript variant X1, mRNA.
ACCESSION   XM_071885905
VERSION     XM_071885905.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5670
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5670
                     /gene="LOC139903978"
                     /note="uncharacterized LOC139903978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903978"
     CDS             434..4426
                     /gene="LOC139903978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742006.1"
                     /db_xref="GeneID:139903978"
                     /translation="MASTITEFSHLQISLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     KFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYIDPSIQKTRGVTYKSDVYSFGVVL
                     WEVLCGRKAFITNGNDKFLAPVARFHYEDNTVNAIMLTWLLQNRLSLDSVQTFTSVAY
                     SCLNDERVLRPDMTHVIYELEKALEFQLPYEIYIRNTLEHVKFQVSDLKIRLADIMLA
                     TDNFSEAYHIGGTIYYDLYKSELELFDKENVATLEEKNSSELSKTRVTVVIKRVFPRK
                     DIRGDVFATELEMLKICNHCNIVTLLGVCDEGSETILVFEHASNGYLREYLFNIKNRP
                     ILTWAQRLKICLDVSHAINYLHYEVENQKAIINCDIRSATIVLDENWGAKIADFGFSV
                     FLPPNLDALELNCILGYDCSVDPEFEETGKLTRESDVYGFGVVLFEILCGRIANDDAF
                     TKESDRGLAFVVRRCFHDGTLKEMIDPIINNECKKDSLDIFIKIAYQCLSKTQDQRPT
                     IKVVIKELERALSLQEDQVQCQEIDKVVEEFWKSVEPTNENLMLKKDAVVRYSWDNSK
                     DLPYAYLNIRRSDILLATDYFSKACIIGNDGLYDLYKAELLVFDQEIFALAEEKNKGE
                     VPKRLTTVCLKCFHKRDENTEFLFRHSFMMYLSCNKHRNIGNLLGLCDEGSEMILVLE
                     YPSNGFLYDYLKKIKDNPILTWAQRLRICLDVAYGLKYLHYEIGDQKAIIHRELRSSC
                     IGLDENWGAKILDHGFTRFSPNEDGDALHFKFKYHLSPTSYRDPEFTRTGTLKRESDV
                     YSLGVIMFEILCGRTADNRIFKKGSDTGLASVARRCFHDGTMQEIIDPILKNGIGENN
                     FSLNKGPNKKSLNAFLEIAYKCLGETQDQRPTSIGVVEELEKALYFQENNDDGDLRIT
                     LEDIKLATKNFHVSNCVGGGGFGNVYKGKLPLSDDTIVAKKLDTRSRQGEQQFRNELQ
                     ILFEYKHENIISLVGYCDQEDAKIIVYAYAPRGSLDRYLSDGRLDWIKRLNICIDVAT
                     ALNFLHRGIGKQATVIHRDIKTANVLLTSDWKAKLADFGLSLISAIHNETDYVINRAC
                     GTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYIPSFIKHNFE
                     NEKREEVVFEKIKAQIMPKALTAFRKVAYRCLRDDRERRPKAKEVVKQLKKALRFQML
                     TDDLASTTSS"
     misc_feature    524..1327
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(524..535,542..544,548..550,593..595,599..601,
                     683..685,731..742,881..883,893..898,902..904,932..937)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1574..2335
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2558..3475
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2558..2569,2576..2578,2582..2584,2654..2656,
                     2660..2662,2774..2776,2822..2833,2984..2986,2996..3001,
                     3005..3007,3035..3040)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3572..4372
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3572..3583,3590..3592,3596..3598,3638..3640,
                     3641..3643,3728..3730,3776..3787,3926..3928,3938..3943,
                     3947..3949,3977..3982)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aaaattcatt ccattcagat tcattcacta atccccaaat tcattcatcc ccggaattcg
       61 cacaatgaaa gacacacaac caccgccgga tcaaccatca ataccgtcgc aaccacgaga
      121 cccatacata caccttcgcc atgaacgatt gaagaacggc ctaattccct tacaaaaact
      181 cattttcacc gacggcatat aaaccctaac ttctatatgt gacaaactac ttcaattaca
      241 ctcaccatat atccaaattg accacgttat cgtttctgaa accctaacga tctcaatgat
      301 tatgatctga ttttattact tagtcatata aacggttgct tcctagtggt cataagattt
      361 ctgctgctgt tgttgctgat gtttgtcctt ctatttatgc tttcaatgga ttcttatctg
      421 cgctttacag aatatggcat ctacaatcac ggagtttagt cacttacaaa tctcacttga
      481 agacgtccta gaagccacca atcactttga tgataaaaat gtcatcggcc atggtgggtt
      541 gggcaaggtt tataaaggaa agctcttgcg gtcagggaag tgggtaaata ttgctgcacg
      601 gagattagac agtaagcata agcgaggcat cgagttttgg acagagattt ctgctctttc
      661 tagtctcaaa catgaaaaca tagtctctat tatcggattt tgcgatgaaa aaggggagaa
      721 ggtgatcata aacaagcatg aggccaagag aagtctcgtg atgtatctaa gcaatccaac
      781 cctctcatgg gttcaaagat tgaagatttg tgttggagtt gcgcgtgcat taagttacat
      841 ccattatgaa aatggacgga gttactcggt gatacatcgt aacatcaaca gctctacaat
      901 acttttagat aataaatttg agccaaagtt atctggtttt gaatattcca tcaaccattc
      961 ggtacaacga atggatcagg ttctcttctc agaagccatt ggaacgacag gatatatcga
     1021 tccgtcaatt caaaagacca gaggtgtgac ctacaagtca gacgtctact catttggtgt
     1081 tgttttatgg gaagtattat gcggtaggaa agcgttcatt acaaatggga atgataagtt
     1141 tctagctcca gtagccagat ttcactatga agacaataca gtaaatgcta taatgctaac
     1201 ttggctgcta cagaaccgat tgtccctgga ctcagtccag accttcacat cagtagctta
     1261 ttcctgctta aacgatgaga gagtacttcg cccggatatg acccatgtta tctacgaact
     1321 tgagaaagca ttagaatttc agctgccata tgaaatctat attagaaaca ccttggaaca
     1381 cgtaaaattc caagtgagtg acttgaagat tagacttgct gacataatgt tggccacaga
     1441 taacttttct gaagcatacc acatcggggg taccatatac tacgacttgt acaaatcaga
     1501 acttgagctt ttcgataaag aaaatgttgc cactttagaa gagaagaata gtagtgaact
     1561 atccaagaca cgtgtcactg tagttataaa acgtgtcttc cctagaaaag acattcgagg
     1621 agacgtattt gctacagaac tggaaatgct taaaatttgt aatcattgca acatagtcac
     1681 cttacttgga gtttgtgatg aaggttctga gacgattctc gtttttgagc atgcttctaa
     1741 tgggtatctt cgtgaatatt tgtttaatat aaaaaacagg cctattctta cttgggcaca
     1801 acgtttgaaa atatgccttg atgtttcaca tgctataaat tatctacact atgaggtgga
     1861 aaatcaaaag gcgattataa actgtgatat aaggagcgcc acaattgttt tagatgagaa
     1921 ttggggtgca aagattgctg actttggttt ctctgtattc cttcctccaa atttagatgc
     1981 tctcgaactc aattgtatcc ttggctatga ttgttctgtc gatccagaat ttgaggagac
     2041 gggcaagtta acacgagaat cggatgtata tggttttgga gtagttttgt ttgaaatttt
     2101 atgtgggagg atagccaatg atgatgcttt tactaaggag agtgacagag gactggcatt
     2161 tgttgtacgg cgatgcttcc atgatggtac actaaaggaa atgatagatc ctataattaa
     2221 taatgagtgt aaaaaagatt ctttagacat attcataaaa attgcatatc agtgtctctc
     2281 aaaaactcaa gaccaacgtc caacaatcaa agtcgtcatt aaagagctag agagagcatt
     2341 atctttgcaa gaggatcaag tacaatgcca agagatcgac aaagttgttg aagaattttg
     2401 gaaatcggta gaaccgacaa atgaaaatct tatgttaaag aaagatgcag ttgtacgtta
     2461 ttcttgggat aacagtaagg atcttcccta tgcataccta aatattcgac ggagtgatat
     2521 acttttggcc accgattact tttctaaggc atgcattatt gggaatgatg gattatatga
     2581 cttgtacaaa gcagaacttt tggtttttga tcaagaaata ttcgccttag cagaagagaa
     2641 aaataaaggt gaagtaccaa agagactcac tactgtatgt ttgaaatgct tccacaaaag
     2701 agatgagaat acagaatttc tatttcgtca cagttttatg atgtatctaa gttgtaataa
     2761 gcatcgcaac atagggaatc tacttggatt gtgtgatgaa ggttctgaaa tgatcctcgt
     2821 tttggagtat ccttctaatg gttttcttta cgattatttg aaaaaaatca aagacaaccc
     2881 tattcttact tgggcacaac gtttgagaat atgtcttgat gttgcatatg gattaaagta
     2941 cctacactat gaaatcggag accaaaaggc gataatacac cgtgaattaa ggagtagttg
     3001 cattgggttg gatgaaaatt ggggggcgaa gattcttgac catggtttca cgagattcag
     3061 tccgaatgaa gatggtgatg ctctacattt taaatttaag tatcatttaa gtcctactag
     3121 ttacagggat ccagaattta ctaggacggg tacgttgaaa agagaatcag atgtatacag
     3181 tttaggagta attatgtttg aaattttgtg tgggaggaca gccgataatc gcattttcaa
     3241 aaaggggagt gacactgggc tggcatctgt ggcaaggaga tgcttccatg atggaacaat
     3301 gcaagaaatc attgatccta tacttaagaa tggaatcggt gagaacaatt tttccctaaa
     3361 taaaggaccc aacaaaaagt ctctcaatgc atttctggaa attgcataca agtgtttagg
     3421 ggaaactcaa gatcaacgtc caacatcaat aggtgttgta gaggagctcg agaaagcctt
     3481 atattttcaa gaaaacaacg atgacggcga cctccggatt acacttgaag atataaagtt
     3541 ggccactaaa aacttccatg ttagcaattg tgttggtgga ggaggatttg gaaatgttta
     3601 taaaggaaaa cttccactaa gtgatgatac aattgttgca aagaaattgg atacaagaag
     3661 tcgtcaaggg gaacaacaat ttcgcaatga gctccaaatt ctttttgagt ataagcacga
     3721 aaatatcatc agtcttgtag gctattgtga tcaagaagat gcaaaaatca ttgtttatgc
     3781 gtatgcacct agaggaagtc ttgatagata tttgagcgat ggtcgtctag attggataaa
     3841 aagacttaac atatgtattg atgttgcaac cgcattgaat tttcttcata gaggaatcgg
     3901 aaaacaagca acagtgatac atagggacat caaaactgct aatgttctac taacgagtga
     3961 ctggaaagca aaacttgccg attttgggct ttccttgata agtgcaatac ataacgaaac
     4021 tgattacgtt atcaatcgtg cgtgtggcac accgggctac gtggatccac tttacttaaa
     4081 atcaggattc ttaaccaaag aatcggatat atattcattt ggtgttgttt tatttgagat
     4141 gttgtgtgga agatcaacgt ttgagaccca caaacgggaa ggtatgtata taccaagttt
     4201 cattaaacac aactttgaaa atgaaaaacg tgaggaggtg gtgtttgaga aaataaaagc
     4261 acagatcatg ccgaaagcat tgactgcatt ccgaaaagtt gcgtaccggt gcttacgtga
     4321 tgatagagaa agacgaccaa aagcaaaaga agttgtaaaa caacttaaga aggcattgag
     4381 atttcaaatg ctgacagatg atttagcttc taccacaagt agctagtatc aactgcaaga
     4441 ttggaattca aaagtttgtt ttcaagcctt tttaaagaat ctagtggttc ctgttgtcag
     4501 tgttttctat acagtagtat ttggaagaag ataaaaggtg tcttttggat atgacaaaat
     4561 ctcatttatc ccttaactac taacagcctc gcaggatttc gtcgtacgag ttttatatca
     4621 ccatcgtttt atattgagtg ttcacaccac ataaacccta aatatagcac atagtcatcg
     4681 ccttcttctg acctccactt ccttctatac catattttcc ccacgctctt tcatcatctc
     4741 ctccttacat cctcatctcc ctcatatcca tcaacagact tctacataat tacacaggca
     4801 aggagtctgg atcgttagaa cacaaaagga taaaccaaca cctcagctaa attggacatc
     4861 ctgccttaag gaactcaagt tcgtacaacc ctgctgtaac attcaaggaa accaataaca
     4921 aaatggaatg aacagctaaa agtgcgttca attaaaatcg ttcagggact tagtggaagg
     4981 tgctcttaat gatggcaata gttggagaat ctatggtcag aaggagatct tagattctaa
     5041 tcatccatgt gggaagaaaa ccgaccaagg atccataaac aatacatgta attgagaaaa
     5101 gcaatcaact tagcgaaggg ttggaccatg ttattcttac aagtagttca taagctcatt
     5161 gaagctgctt ttgcggaaga gtttcaacga acgcttcatc aatcggccta aaaggaaaaa
     5221 acgtgcaaca cttaactaac agttatttta caaattgcgg aggacaaaaa agatatgatg
     5281 acggatatat ttgaaccggg ttgagcaaca acagaaaaac gcttcattca aggttataac
     5341 aaacactagc tctatttcaa ttgtagcagt ggggctgacc tatgccaatt caggtttaga
     5401 gcctgaagga acagacacaa accaaatgaa gaagaaaagg gaatagcaca tcaacagcac
     5461 catattttga tagcaacagc tttggacaat aacagctttt gaaaactcaa gattcctcaa
     5521 tcagaaaacc aatctcatcc ctggtatatc aacaactcat atattagaaa ttgtaagata
     5581 aatggtatat acatctcata aatgttcaaa tataaaaagc ttcaacagct ttggaaatat
     5641 tagttttaac aatgcgttac atattaatat
//
LOCUS       XM_071885906            5584 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903978), transcript variant X2, mRNA.
ACCESSION   XM_071885906
VERSION     XM_071885906.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5584
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5584
                     /gene="LOC139903978"
                     /note="uncharacterized LOC139903978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903978"
     CDS             434..4426
                     /gene="LOC139903978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742007.1"
                     /db_xref="GeneID:139903978"
                     /translation="MASTITEFSHLQISLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     KFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYIDPSIQKTRGVTYKSDVYSFGVVL
                     WEVLCGRKAFITNGNDKFLAPVARFHYEDNTVNAIMLTWLLQNRLSLDSVQTFTSVAY
                     SCLNDERVLRPDMTHVIYELEKALEFQLPYEIYIRNTLEHVKFQVSDLKIRLADIMLA
                     TDNFSEAYHIGGTIYYDLYKSELELFDKENVATLEEKNSSELSKTRVTVVIKRVFPRK
                     DIRGDVFATELEMLKICNHCNIVTLLGVCDEGSETILVFEHASNGYLREYLFNIKNRP
                     ILTWAQRLKICLDVSHAINYLHYEVENQKAIINCDIRSATIVLDENWGAKIADFGFSV
                     FLPPNLDALELNCILGYDCSVDPEFEETGKLTRESDVYGFGVVLFEILCGRIANDDAF
                     TKESDRGLAFVVRRCFHDGTLKEMIDPIINNECKKDSLDIFIKIAYQCLSKTQDQRPT
                     IKVVIKELERALSLQEDQVQCQEIDKVVEEFWKSVEPTNENLMLKKDAVVRYSWDNSK
                     DLPYAYLNIRRSDILLATDYFSKACIIGNDGLYDLYKAELLVFDQEIFALAEEKNKGE
                     VPKRLTTVCLKCFHKRDENTEFLFRHSFMMYLSCNKHRNIGNLLGLCDEGSEMILVLE
                     YPSNGFLYDYLKKIKDNPILTWAQRLRICLDVAYGLKYLHYEIGDQKAIIHRELRSSC
                     IGLDENWGAKILDHGFTRFSPNEDGDALHFKFKYHLSPTSYRDPEFTRTGTLKRESDV
                     YSLGVIMFEILCGRTADNRIFKKGSDTGLASVARRCFHDGTMQEIIDPILKNGIGENN
                     FSLNKGPNKKSLNAFLEIAYKCLGETQDQRPTSIGVVEELEKALYFQENNDDGDLRIT
                     LEDIKLATKNFHVSNCVGGGGFGNVYKGKLPLSDDTIVAKKLDTRSRQGEQQFRNELQ
                     ILFEYKHENIISLVGYCDQEDAKIIVYAYAPRGSLDRYLSDGRLDWIKRLNICIDVAT
                     ALNFLHRGIGKQATVIHRDIKTANVLLTSDWKAKLADFGLSLISAIHNETDYVINRAC
                     GTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYIPSFIKHNFE
                     NEKREEVVFEKIKAQIMPKALTAFRKVAYRCLRDDRERRPKAKEVVKQLKKALRFQML
                     TDDLASTTSS"
     misc_feature    524..1327
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(524..535,542..544,548..550,593..595,599..601,
                     683..685,731..742,881..883,893..898,902..904,932..937)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1574..2335
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2558..3475
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2558..2569,2576..2578,2582..2584,2654..2656,
                     2660..2662,2774..2776,2822..2833,2984..2986,2996..3001,
                     3005..3007,3035..3040)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3572..4372
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3572..3583,3590..3592,3596..3598,3638..3640,
                     3641..3643,3728..3730,3776..3787,3926..3928,3938..3943,
                     3947..3949,3977..3982)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aaaattcatt ccattcagat tcattcacta atccccaaat tcattcatcc ccggaattcg
       61 cacaatgaaa gacacacaac caccgccgga tcaaccatca ataccgtcgc aaccacgaga
      121 cccatacata caccttcgcc atgaacgatt gaagaacggc ctaattccct tacaaaaact
      181 cattttcacc gacggcatat aaaccctaac ttctatatgt gacaaactac ttcaattaca
      241 ctcaccatat atccaaattg accacgttat cgtttctgaa accctaacga tctcaatgat
      301 tatgatctga ttttattact tagtcatata aacggttgct tcctagtggt cataagattt
      361 ctgctgctgt tgttgctgat gtttgtcctt ctatttatgc tttcaatgga ttcttatctg
      421 cgctttacag aatatggcat ctacaatcac ggagtttagt cacttacaaa tctcacttga
      481 agacgtccta gaagccacca atcactttga tgataaaaat gtcatcggcc atggtgggtt
      541 gggcaaggtt tataaaggaa agctcttgcg gtcagggaag tgggtaaata ttgctgcacg
      601 gagattagac agtaagcata agcgaggcat cgagttttgg acagagattt ctgctctttc
      661 tagtctcaaa catgaaaaca tagtctctat tatcggattt tgcgatgaaa aaggggagaa
      721 ggtgatcata aacaagcatg aggccaagag aagtctcgtg atgtatctaa gcaatccaac
      781 cctctcatgg gttcaaagat tgaagatttg tgttggagtt gcgcgtgcat taagttacat
      841 ccattatgaa aatggacgga gttactcggt gatacatcgt aacatcaaca gctctacaat
      901 acttttagat aataaatttg agccaaagtt atctggtttt gaatattcca tcaaccattc
      961 ggtacaacga atggatcagg ttctcttctc agaagccatt ggaacgacag gatatatcga
     1021 tccgtcaatt caaaagacca gaggtgtgac ctacaagtca gacgtctact catttggtgt
     1081 tgttttatgg gaagtattat gcggtaggaa agcgttcatt acaaatggga atgataagtt
     1141 tctagctcca gtagccagat ttcactatga agacaataca gtaaatgcta taatgctaac
     1201 ttggctgcta cagaaccgat tgtccctgga ctcagtccag accttcacat cagtagctta
     1261 ttcctgctta aacgatgaga gagtacttcg cccggatatg acccatgtta tctacgaact
     1321 tgagaaagca ttagaatttc agctgccata tgaaatctat attagaaaca ccttggaaca
     1381 cgtaaaattc caagtgagtg acttgaagat tagacttgct gacataatgt tggccacaga
     1441 taacttttct gaagcatacc acatcggggg taccatatac tacgacttgt acaaatcaga
     1501 acttgagctt ttcgataaag aaaatgttgc cactttagaa gagaagaata gtagtgaact
     1561 atccaagaca cgtgtcactg tagttataaa acgtgtcttc cctagaaaag acattcgagg
     1621 agacgtattt gctacagaac tggaaatgct taaaatttgt aatcattgca acatagtcac
     1681 cttacttgga gtttgtgatg aaggttctga gacgattctc gtttttgagc atgcttctaa
     1741 tgggtatctt cgtgaatatt tgtttaatat aaaaaacagg cctattctta cttgggcaca
     1801 acgtttgaaa atatgccttg atgtttcaca tgctataaat tatctacact atgaggtgga
     1861 aaatcaaaag gcgattataa actgtgatat aaggagcgcc acaattgttt tagatgagaa
     1921 ttggggtgca aagattgctg actttggttt ctctgtattc cttcctccaa atttagatgc
     1981 tctcgaactc aattgtatcc ttggctatga ttgttctgtc gatccagaat ttgaggagac
     2041 gggcaagtta acacgagaat cggatgtata tggttttgga gtagttttgt ttgaaatttt
     2101 atgtgggagg atagccaatg atgatgcttt tactaaggag agtgacagag gactggcatt
     2161 tgttgtacgg cgatgcttcc atgatggtac actaaaggaa atgatagatc ctataattaa
     2221 taatgagtgt aaaaaagatt ctttagacat attcataaaa attgcatatc agtgtctctc
     2281 aaaaactcaa gaccaacgtc caacaatcaa agtcgtcatt aaagagctag agagagcatt
     2341 atctttgcaa gaggatcaag tacaatgcca agagatcgac aaagttgttg aagaattttg
     2401 gaaatcggta gaaccgacaa atgaaaatct tatgttaaag aaagatgcag ttgtacgtta
     2461 ttcttgggat aacagtaagg atcttcccta tgcataccta aatattcgac ggagtgatat
     2521 acttttggcc accgattact tttctaaggc atgcattatt gggaatgatg gattatatga
     2581 cttgtacaaa gcagaacttt tggtttttga tcaagaaata ttcgccttag cagaagagaa
     2641 aaataaaggt gaagtaccaa agagactcac tactgtatgt ttgaaatgct tccacaaaag
     2701 agatgagaat acagaatttc tatttcgtca cagttttatg atgtatctaa gttgtaataa
     2761 gcatcgcaac atagggaatc tacttggatt gtgtgatgaa ggttctgaaa tgatcctcgt
     2821 tttggagtat ccttctaatg gttttcttta cgattatttg aaaaaaatca aagacaaccc
     2881 tattcttact tgggcacaac gtttgagaat atgtcttgat gttgcatatg gattaaagta
     2941 cctacactat gaaatcggag accaaaaggc gataatacac cgtgaattaa ggagtagttg
     3001 cattgggttg gatgaaaatt ggggggcgaa gattcttgac catggtttca cgagattcag
     3061 tccgaatgaa gatggtgatg ctctacattt taaatttaag tatcatttaa gtcctactag
     3121 ttacagggat ccagaattta ctaggacggg tacgttgaaa agagaatcag atgtatacag
     3181 tttaggagta attatgtttg aaattttgtg tgggaggaca gccgataatc gcattttcaa
     3241 aaaggggagt gacactgggc tggcatctgt ggcaaggaga tgcttccatg atggaacaat
     3301 gcaagaaatc attgatccta tacttaagaa tggaatcggt gagaacaatt tttccctaaa
     3361 taaaggaccc aacaaaaagt ctctcaatgc atttctggaa attgcataca agtgtttagg
     3421 ggaaactcaa gatcaacgtc caacatcaat aggtgttgta gaggagctcg agaaagcctt
     3481 atattttcaa gaaaacaacg atgacggcga cctccggatt acacttgaag atataaagtt
     3541 ggccactaaa aacttccatg ttagcaattg tgttggtgga ggaggatttg gaaatgttta
     3601 taaaggaaaa cttccactaa gtgatgatac aattgttgca aagaaattgg atacaagaag
     3661 tcgtcaaggg gaacaacaat ttcgcaatga gctccaaatt ctttttgagt ataagcacga
     3721 aaatatcatc agtcttgtag gctattgtga tcaagaagat gcaaaaatca ttgtttatgc
     3781 gtatgcacct agaggaagtc ttgatagata tttgagcgat ggtcgtctag attggataaa
     3841 aagacttaac atatgtattg atgttgcaac cgcattgaat tttcttcata gaggaatcgg
     3901 aaaacaagca acagtgatac atagggacat caaaactgct aatgttctac taacgagtga
     3961 ctggaaagca aaacttgccg attttgggct ttccttgata agtgcaatac ataacgaaac
     4021 tgattacgtt atcaatcgtg cgtgtggcac accgggctac gtggatccac tttacttaaa
     4081 atcaggattc ttaaccaaag aatcggatat atattcattt ggtgttgttt tatttgagat
     4141 gttgtgtgga agatcaacgt ttgagaccca caaacgggaa ggtatgtata taccaagttt
     4201 cattaaacac aactttgaaa atgaaaaacg tgaggaggtg gtgtttgaga aaataaaagc
     4261 acagatcatg ccgaaagcat tgactgcatt ccgaaaagtt gcgtaccggt gcttacgtga
     4321 tgatagagaa agacgaccaa aagcaaaaga agttgtaaaa caacttaaga aggcattgag
     4381 atttcaaatg ctgacagatg atttagcttc taccacaagt agctagtatc aactgcaaga
     4441 ttggaattca aaagtttgtt ttcaagcctt tttaaagaat ctagtggttc ctgttgtcag
     4501 cctcgcagga tttcgtcgta cgagttttat atcaccatcg ttttatattg agtgttcaca
     4561 ccacataaac cctaaatata gcacatagtc atcgccttct tctgacctcc acttccttct
     4621 ataccatatt ttccccacgc tctttcatca tctcctcctt acatcctcat ctccctcata
     4681 tccatcaaca gacttctaca taattacaca ggcaaggagt ctggatcgtt agaacacaaa
     4741 aggataaacc aacacctcag ctaaattgga catcctgcct taaggaactc aagttcgtac
     4801 aaccctgctg taacattcaa ggaaaccaat aacaaaatgg aatgaacagc taaaagtgcg
     4861 ttcaattaaa atcgttcagg gacttagtgg aaggtgctct taatgatggc aatagttgga
     4921 gaatctatgg tcagaaggag atcttagatt ctaatcatcc atgtgggaag aaaaccgacc
     4981 aaggatccat aaacaataca tgtaattgag aaaagcaatc aacttagcga agggttggac
     5041 catgttattc ttacaagtag ttcataagct cattgaagct gcttttgcgg aagagtttca
     5101 acgaacgctt catcaatcgg cctaaaagga aaaaacgtgc aacacttaac taacagttat
     5161 tttacaaatt gcggaggaca aaaaagatat gatgacggat atatttgaac cgggttgagc
     5221 aacaacagaa aaacgcttca ttcaaggtta taacaaacac tagctctatt tcaattgtag
     5281 cagtggggct gacctatgcc aattcaggtt tagagcctga aggaacagac acaaaccaaa
     5341 tgaagaagaa aagggaatag cacatcaaca gcaccatatt ttgatagcaa cagctttgga
     5401 caataacagc ttttgaaaac tcaagattcc tcaatcagaa aaccaatctc atccctggta
     5461 tatcaacaac tcatatatta gaaattgtaa gataaatggt atatacatct cataaatgtt
     5521 caaatataaa aagcttcaac agctttggaa atattagttt taacaatgcg ttacatatta
     5581 atat
//
LOCUS       XM_071885907            5572 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903978), transcript variant X3, mRNA.
ACCESSION   XM_071885907
VERSION     XM_071885907.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5572
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5572
                     /gene="LOC139903978"
                     /note="uncharacterized LOC139903978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903978"
     CDS             434..4426
                     /gene="LOC139903978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742008.1"
                     /db_xref="GeneID:139903978"
                     /translation="MASTITEFSHLQISLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     KFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYIDPSIQKTRGVTYKSDVYSFGVVL
                     WEVLCGRKAFITNGNDKFLAPVARFHYEDNTVNAIMLTWLLQNRLSLDSVQTFTSVAY
                     SCLNDERVLRPDMTHVIYELEKALEFQLPYEIYIRNTLEHVKFQVSDLKIRLADIMLA
                     TDNFSEAYHIGGTIYYDLYKSELELFDKENVATLEEKNSSELSKTRVTVVIKRVFPRK
                     DIRGDVFATELEMLKICNHCNIVTLLGVCDEGSETILVFEHASNGYLREYLFNIKNRP
                     ILTWAQRLKICLDVSHAINYLHYEVENQKAIINCDIRSATIVLDENWGAKIADFGFSV
                     FLPPNLDALELNCILGYDCSVDPEFEETGKLTRESDVYGFGVVLFEILCGRIANDDAF
                     TKESDRGLAFVVRRCFHDGTLKEMIDPIINNECKKDSLDIFIKIAYQCLSKTQDQRPT
                     IKVVIKELERALSLQEDQVQCQEIDKVVEEFWKSVEPTNENLMLKKDAVVRYSWDNSK
                     DLPYAYLNIRRSDILLATDYFSKACIIGNDGLYDLYKAELLVFDQEIFALAEEKNKGE
                     VPKRLTTVCLKCFHKRDENTEFLFRHSFMMYLSCNKHRNIGNLLGLCDEGSEMILVLE
                     YPSNGFLYDYLKKIKDNPILTWAQRLRICLDVAYGLKYLHYEIGDQKAIIHRELRSSC
                     IGLDENWGAKILDHGFTRFSPNEDGDALHFKFKYHLSPTSYRDPEFTRTGTLKRESDV
                     YSLGVIMFEILCGRTADNRIFKKGSDTGLASVARRCFHDGTMQEIIDPILKNGIGENN
                     FSLNKGPNKKSLNAFLEIAYKCLGETQDQRPTSIGVVEELEKALYFQENNDDGDLRIT
                     LEDIKLATKNFHVSNCVGGGGFGNVYKGKLPLSDDTIVAKKLDTRSRQGEQQFRNELQ
                     ILFEYKHENIISLVGYCDQEDAKIIVYAYAPRGSLDRYLSDGRLDWIKRLNICIDVAT
                     ALNFLHRGIGKQATVIHRDIKTANVLLTSDWKAKLADFGLSLISAIHNETDYVINRAC
                     GTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYIPSFIKHNFE
                     NEKREEVVFEKIKAQIMPKALTAFRKVAYRCLRDDRERRPKAKEVVKQLKKALRFQML
                     TDDLASTTSS"
     misc_feature    524..1327
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(524..535,542..544,548..550,593..595,599..601,
                     683..685,731..742,881..883,893..898,902..904,932..937)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1574..2335
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2558..3475
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2558..2569,2576..2578,2582..2584,2654..2656,
                     2660..2662,2774..2776,2822..2833,2984..2986,2996..3001,
                     3005..3007,3035..3040)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3572..4372
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3572..3583,3590..3592,3596..3598,3638..3640,
                     3641..3643,3728..3730,3776..3787,3926..3928,3938..3943,
                     3947..3949,3977..3982)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aaaattcatt ccattcagat tcattcacta atccccaaat tcattcatcc ccggaattcg
       61 cacaatgaaa gacacacaac caccgccgga tcaaccatca ataccgtcgc aaccacgaga
      121 cccatacata caccttcgcc atgaacgatt gaagaacggc ctaattccct tacaaaaact
      181 cattttcacc gacggcatat aaaccctaac ttctatatgt gacaaactac ttcaattaca
      241 ctcaccatat atccaaattg accacgttat cgtttctgaa accctaacga tctcaatgat
      301 tatgatctga ttttattact tagtcatata aacggttgct tcctagtggt cataagattt
      361 ctgctgctgt tgttgctgat gtttgtcctt ctatttatgc tttcaatgga ttcttatctg
      421 cgctttacag aatatggcat ctacaatcac ggagtttagt cacttacaaa tctcacttga
      481 agacgtccta gaagccacca atcactttga tgataaaaat gtcatcggcc atggtgggtt
      541 gggcaaggtt tataaaggaa agctcttgcg gtcagggaag tgggtaaata ttgctgcacg
      601 gagattagac agtaagcata agcgaggcat cgagttttgg acagagattt ctgctctttc
      661 tagtctcaaa catgaaaaca tagtctctat tatcggattt tgcgatgaaa aaggggagaa
      721 ggtgatcata aacaagcatg aggccaagag aagtctcgtg atgtatctaa gcaatccaac
      781 cctctcatgg gttcaaagat tgaagatttg tgttggagtt gcgcgtgcat taagttacat
      841 ccattatgaa aatggacgga gttactcggt gatacatcgt aacatcaaca gctctacaat
      901 acttttagat aataaatttg agccaaagtt atctggtttt gaatattcca tcaaccattc
      961 ggtacaacga atggatcagg ttctcttctc agaagccatt ggaacgacag gatatatcga
     1021 tccgtcaatt caaaagacca gaggtgtgac ctacaagtca gacgtctact catttggtgt
     1081 tgttttatgg gaagtattat gcggtaggaa agcgttcatt acaaatggga atgataagtt
     1141 tctagctcca gtagccagat ttcactatga agacaataca gtaaatgcta taatgctaac
     1201 ttggctgcta cagaaccgat tgtccctgga ctcagtccag accttcacat cagtagctta
     1261 ttcctgctta aacgatgaga gagtacttcg cccggatatg acccatgtta tctacgaact
     1321 tgagaaagca ttagaatttc agctgccata tgaaatctat attagaaaca ccttggaaca
     1381 cgtaaaattc caagtgagtg acttgaagat tagacttgct gacataatgt tggccacaga
     1441 taacttttct gaagcatacc acatcggggg taccatatac tacgacttgt acaaatcaga
     1501 acttgagctt ttcgataaag aaaatgttgc cactttagaa gagaagaata gtagtgaact
     1561 atccaagaca cgtgtcactg tagttataaa acgtgtcttc cctagaaaag acattcgagg
     1621 agacgtattt gctacagaac tggaaatgct taaaatttgt aatcattgca acatagtcac
     1681 cttacttgga gtttgtgatg aaggttctga gacgattctc gtttttgagc atgcttctaa
     1741 tgggtatctt cgtgaatatt tgtttaatat aaaaaacagg cctattctta cttgggcaca
     1801 acgtttgaaa atatgccttg atgtttcaca tgctataaat tatctacact atgaggtgga
     1861 aaatcaaaag gcgattataa actgtgatat aaggagcgcc acaattgttt tagatgagaa
     1921 ttggggtgca aagattgctg actttggttt ctctgtattc cttcctccaa atttagatgc
     1981 tctcgaactc aattgtatcc ttggctatga ttgttctgtc gatccagaat ttgaggagac
     2041 gggcaagtta acacgagaat cggatgtata tggttttgga gtagttttgt ttgaaatttt
     2101 atgtgggagg atagccaatg atgatgcttt tactaaggag agtgacagag gactggcatt
     2161 tgttgtacgg cgatgcttcc atgatggtac actaaaggaa atgatagatc ctataattaa
     2221 taatgagtgt aaaaaagatt ctttagacat attcataaaa attgcatatc agtgtctctc
     2281 aaaaactcaa gaccaacgtc caacaatcaa agtcgtcatt aaagagctag agagagcatt
     2341 atctttgcaa gaggatcaag tacaatgcca agagatcgac aaagttgttg aagaattttg
     2401 gaaatcggta gaaccgacaa atgaaaatct tatgttaaag aaagatgcag ttgtacgtta
     2461 ttcttgggat aacagtaagg atcttcccta tgcataccta aatattcgac ggagtgatat
     2521 acttttggcc accgattact tttctaaggc atgcattatt gggaatgatg gattatatga
     2581 cttgtacaaa gcagaacttt tggtttttga tcaagaaata ttcgccttag cagaagagaa
     2641 aaataaaggt gaagtaccaa agagactcac tactgtatgt ttgaaatgct tccacaaaag
     2701 agatgagaat acagaatttc tatttcgtca cagttttatg atgtatctaa gttgtaataa
     2761 gcatcgcaac atagggaatc tacttggatt gtgtgatgaa ggttctgaaa tgatcctcgt
     2821 tttggagtat ccttctaatg gttttcttta cgattatttg aaaaaaatca aagacaaccc
     2881 tattcttact tgggcacaac gtttgagaat atgtcttgat gttgcatatg gattaaagta
     2941 cctacactat gaaatcggag accaaaaggc gataatacac cgtgaattaa ggagtagttg
     3001 cattgggttg gatgaaaatt ggggggcgaa gattcttgac catggtttca cgagattcag
     3061 tccgaatgaa gatggtgatg ctctacattt taaatttaag tatcatttaa gtcctactag
     3121 ttacagggat ccagaattta ctaggacggg tacgttgaaa agagaatcag atgtatacag
     3181 tttaggagta attatgtttg aaattttgtg tgggaggaca gccgataatc gcattttcaa
     3241 aaaggggagt gacactgggc tggcatctgt ggcaaggaga tgcttccatg atggaacaat
     3301 gcaagaaatc attgatccta tacttaagaa tggaatcggt gagaacaatt tttccctaaa
     3361 taaaggaccc aacaaaaagt ctctcaatgc atttctggaa attgcataca agtgtttagg
     3421 ggaaactcaa gatcaacgtc caacatcaat aggtgttgta gaggagctcg agaaagcctt
     3481 atattttcaa gaaaacaacg atgacggcga cctccggatt acacttgaag atataaagtt
     3541 ggccactaaa aacttccatg ttagcaattg tgttggtgga ggaggatttg gaaatgttta
     3601 taaaggaaaa cttccactaa gtgatgatac aattgttgca aagaaattgg atacaagaag
     3661 tcgtcaaggg gaacaacaat ttcgcaatga gctccaaatt ctttttgagt ataagcacga
     3721 aaatatcatc agtcttgtag gctattgtga tcaagaagat gcaaaaatca ttgtttatgc
     3781 gtatgcacct agaggaagtc ttgatagata tttgagcgat ggtcgtctag attggataaa
     3841 aagacttaac atatgtattg atgttgcaac cgcattgaat tttcttcata gaggaatcgg
     3901 aaaacaagca acagtgatac atagggacat caaaactgct aatgttctac taacgagtga
     3961 ctggaaagca aaacttgccg attttgggct ttccttgata agtgcaatac ataacgaaac
     4021 tgattacgtt atcaatcgtg cgtgtggcac accgggctac gtggatccac tttacttaaa
     4081 atcaggattc ttaaccaaag aatcggatat atattcattt ggtgttgttt tatttgagat
     4141 gttgtgtgga agatcaacgt ttgagaccca caaacgggaa ggtatgtata taccaagttt
     4201 cattaaacac aactttgaaa atgaaaaacg tgaggaggtg gtgtttgaga aaataaaagc
     4261 acagatcatg ccgaaagcat tgactgcatt ccgaaaagtt gcgtaccggt gcttacgtga
     4321 tgatagagaa agacgaccaa aagcaaaaga agttgtaaaa caacttaaga aggcattgag
     4381 atttcaaatg ctgacagatg atttagcttc taccacaagt agctagtatc aactgcaaga
     4441 ttggaattca aaagtttgtt ttcaagcctt tttaaagaat ctagtggttc ctgttgtcag
     4501 tgttttctat acagtagtat ttggaagaag ataaaaggtg tcttttggat atgacaaaat
     4561 ctcatttatc ccttaactac taacagcctc gcaggatttc gtcgtacgag ttttatatca
     4621 ccatcgtttt atattgagtg ttcacaccac ataaacccta aatatagcac atagtcatcg
     4681 ccttcttctg acctccactt ccttctatac catattttcc ccacgctctt tcatcatctc
     4741 ctccttacat cctcatctcc ctcatatcca tcaacagact tctacataat tacacaggca
     4801 aggagtctgg atcgttagaa cacaaaagga taaaccaaca cctcagctaa attggacatc
     4861 ctgccttaag gaactcaagt tcgtacaacc ctgctgtaac attcaaggaa accaataaca
     4921 aaatggaatg aacagctaaa agtgcgttca attaaaatcg ttcagggact tagtggaagg
     4981 tgctcttaat gatggcaata gttggagaat ctatggtcag aaggagatct tagattctaa
     5041 tcatccatgt gggaagaaaa ccgaccaagg atccataaac aatacatgta attgagaaaa
     5101 gcaatcaact tagcgaaggg ttggaccatg ttattcttac aagtagttca taagctcatt
     5161 gaagctgctt ttgcggaaga gtttcaacga acgcttcatc aatcggccta aaaggaaaaa
     5221 acgtgcaaca cttaactaac agttatttta caaattgcgg aggacaaaaa agatatgatg
     5281 acggatatat ttgaaccggg ttgagcaaca acagaaaaac gcttcattca aggttataac
     5341 aaacactagc tctatttcaa ttgtagcagt ggggctgacc tatgccaatt caggtttaga
     5401 gcctgaagga acagacacaa accaaatgaa gaagaaaagg gaatagcaca tcaacagcac
     5461 catattttga tagcaacagc tttggacaat aacagctttt gaaaactcaa gattcctcaa
     5521 tcagaaaacc aatctcatcc ctgtttgttg tgatttgcgc actttcaaga ac
//
LOCUS       XM_071885908            5630 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903978), transcript variant X4, mRNA.
ACCESSION   XM_071885908
VERSION     XM_071885908.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5630
                     /gene="LOC139903978"
                     /note="uncharacterized LOC139903978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903978"
     CDS             434..4426
                     /gene="LOC139903978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742009.1"
                     /db_xref="GeneID:139903978"
                     /translation="MASTITEFSHLQISLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     KFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYIDPSIQKTRGVTYKSDVYSFGVVL
                     WEVLCGRKAFITNGNDKFLAPVARFHYEDNTVNAIMLTWLLQNRLSLDSVQTFTSVAY
                     SCLNDERVLRPDMTHVIYELEKALEFQLPYEIYIRNTLEHVKFQVSDLKIRLADIMLA
                     TDNFSEAYHIGGTIYYDLYKSELELFDKENVATLEEKNSSELSKTRVTVVIKRVFPRK
                     DIRGDVFATELEMLKICNHCNIVTLLGVCDEGSETILVFEHASNGYLREYLFNIKNRP
                     ILTWAQRLKICLDVSHAINYLHYEVENQKAIINCDIRSATIVLDENWGAKIADFGFSV
                     FLPPNLDALELNCILGYDCSVDPEFEETGKLTRESDVYGFGVVLFEILCGRIANDDAF
                     TKESDRGLAFVVRRCFHDGTLKEMIDPIINNECKKDSLDIFIKIAYQCLSKTQDQRPT
                     IKVVIKELERALSLQEDQVQCQEIDKVVEEFWKSVEPTNENLMLKKDAVVRYSWDNSK
                     DLPYAYLNIRRSDILLATDYFSKACIIGNDGLYDLYKAELLVFDQEIFALAEEKNKGE
                     VPKRLTTVCLKCFHKRDENTEFLFRHSFMMYLSCNKHRNIGNLLGLCDEGSEMILVLE
                     YPSNGFLYDYLKKIKDNPILTWAQRLRICLDVAYGLKYLHYEIGDQKAIIHRELRSSC
                     IGLDENWGAKILDHGFTRFSPNEDGDALHFKFKYHLSPTSYRDPEFTRTGTLKRESDV
                     YSLGVIMFEILCGRTADNRIFKKGSDTGLASVARRCFHDGTMQEIIDPILKNGIGENN
                     FSLNKGPNKKSLNAFLEIAYKCLGETQDQRPTSIGVVEELEKALYFQENNDDGDLRIT
                     LEDIKLATKNFHVSNCVGGGGFGNVYKGKLPLSDDTIVAKKLDTRSRQGEQQFRNELQ
                     ILFEYKHENIISLVGYCDQEDAKIIVYAYAPRGSLDRYLSDGRLDWIKRLNICIDVAT
                     ALNFLHRGIGKQATVIHRDIKTANVLLTSDWKAKLADFGLSLISAIHNETDYVINRAC
                     GTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYIPSFIKHNFE
                     NEKREEVVFEKIKAQIMPKALTAFRKVAYRCLRDDRERRPKAKEVVKQLKKALRFQML
                     TDDLASTTSS"
     misc_feature    524..1327
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(524..535,542..544,548..550,593..595,599..601,
                     683..685,731..742,881..883,893..898,902..904,932..937)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1574..2335
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2558..3475
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2558..2569,2576..2578,2582..2584,2654..2656,
                     2660..2662,2774..2776,2822..2833,2984..2986,2996..3001,
                     3005..3007,3035..3040)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3572..4372
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3572..3583,3590..3592,3596..3598,3638..3640,
                     3641..3643,3728..3730,3776..3787,3926..3928,3938..3943,
                     3947..3949,3977..3982)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aaaattcatt ccattcagat tcattcacta atccccaaat tcattcatcc ccggaattcg
       61 cacaatgaaa gacacacaac caccgccgga tcaaccatca ataccgtcgc aaccacgaga
      121 cccatacata caccttcgcc atgaacgatt gaagaacggc ctaattccct tacaaaaact
      181 cattttcacc gacggcatat aaaccctaac ttctatatgt gacaaactac ttcaattaca
      241 ctcaccatat atccaaattg accacgttat cgtttctgaa accctaacga tctcaatgat
      301 tatgatctga ttttattact tagtcatata aacggttgct tcctagtggt cataagattt
      361 ctgctgctgt tgttgctgat gtttgtcctt ctatttatgc tttcaatgga ttcttatctg
      421 cgctttacag aatatggcat ctacaatcac ggagtttagt cacttacaaa tctcacttga
      481 agacgtccta gaagccacca atcactttga tgataaaaat gtcatcggcc atggtgggtt
      541 gggcaaggtt tataaaggaa agctcttgcg gtcagggaag tgggtaaata ttgctgcacg
      601 gagattagac agtaagcata agcgaggcat cgagttttgg acagagattt ctgctctttc
      661 tagtctcaaa catgaaaaca tagtctctat tatcggattt tgcgatgaaa aaggggagaa
      721 ggtgatcata aacaagcatg aggccaagag aagtctcgtg atgtatctaa gcaatccaac
      781 cctctcatgg gttcaaagat tgaagatttg tgttggagtt gcgcgtgcat taagttacat
      841 ccattatgaa aatggacgga gttactcggt gatacatcgt aacatcaaca gctctacaat
      901 acttttagat aataaatttg agccaaagtt atctggtttt gaatattcca tcaaccattc
      961 ggtacaacga atggatcagg ttctcttctc agaagccatt ggaacgacag gatatatcga
     1021 tccgtcaatt caaaagacca gaggtgtgac ctacaagtca gacgtctact catttggtgt
     1081 tgttttatgg gaagtattat gcggtaggaa agcgttcatt acaaatggga atgataagtt
     1141 tctagctcca gtagccagat ttcactatga agacaataca gtaaatgcta taatgctaac
     1201 ttggctgcta cagaaccgat tgtccctgga ctcagtccag accttcacat cagtagctta
     1261 ttcctgctta aacgatgaga gagtacttcg cccggatatg acccatgtta tctacgaact
     1321 tgagaaagca ttagaatttc agctgccata tgaaatctat attagaaaca ccttggaaca
     1381 cgtaaaattc caagtgagtg acttgaagat tagacttgct gacataatgt tggccacaga
     1441 taacttttct gaagcatacc acatcggggg taccatatac tacgacttgt acaaatcaga
     1501 acttgagctt ttcgataaag aaaatgttgc cactttagaa gagaagaata gtagtgaact
     1561 atccaagaca cgtgtcactg tagttataaa acgtgtcttc cctagaaaag acattcgagg
     1621 agacgtattt gctacagaac tggaaatgct taaaatttgt aatcattgca acatagtcac
     1681 cttacttgga gtttgtgatg aaggttctga gacgattctc gtttttgagc atgcttctaa
     1741 tgggtatctt cgtgaatatt tgtttaatat aaaaaacagg cctattctta cttgggcaca
     1801 acgtttgaaa atatgccttg atgtttcaca tgctataaat tatctacact atgaggtgga
     1861 aaatcaaaag gcgattataa actgtgatat aaggagcgcc acaattgttt tagatgagaa
     1921 ttggggtgca aagattgctg actttggttt ctctgtattc cttcctccaa atttagatgc
     1981 tctcgaactc aattgtatcc ttggctatga ttgttctgtc gatccagaat ttgaggagac
     2041 gggcaagtta acacgagaat cggatgtata tggttttgga gtagttttgt ttgaaatttt
     2101 atgtgggagg atagccaatg atgatgcttt tactaaggag agtgacagag gactggcatt
     2161 tgttgtacgg cgatgcttcc atgatggtac actaaaggaa atgatagatc ctataattaa
     2221 taatgagtgt aaaaaagatt ctttagacat attcataaaa attgcatatc agtgtctctc
     2281 aaaaactcaa gaccaacgtc caacaatcaa agtcgtcatt aaagagctag agagagcatt
     2341 atctttgcaa gaggatcaag tacaatgcca agagatcgac aaagttgttg aagaattttg
     2401 gaaatcggta gaaccgacaa atgaaaatct tatgttaaag aaagatgcag ttgtacgtta
     2461 ttcttgggat aacagtaagg atcttcccta tgcataccta aatattcgac ggagtgatat
     2521 acttttggcc accgattact tttctaaggc atgcattatt gggaatgatg gattatatga
     2581 cttgtacaaa gcagaacttt tggtttttga tcaagaaata ttcgccttag cagaagagaa
     2641 aaataaaggt gaagtaccaa agagactcac tactgtatgt ttgaaatgct tccacaaaag
     2701 agatgagaat acagaatttc tatttcgtca cagttttatg atgtatctaa gttgtaataa
     2761 gcatcgcaac atagggaatc tacttggatt gtgtgatgaa ggttctgaaa tgatcctcgt
     2821 tttggagtat ccttctaatg gttttcttta cgattatttg aaaaaaatca aagacaaccc
     2881 tattcttact tgggcacaac gtttgagaat atgtcttgat gttgcatatg gattaaagta
     2941 cctacactat gaaatcggag accaaaaggc gataatacac cgtgaattaa ggagtagttg
     3001 cattgggttg gatgaaaatt ggggggcgaa gattcttgac catggtttca cgagattcag
     3061 tccgaatgaa gatggtgatg ctctacattt taaatttaag tatcatttaa gtcctactag
     3121 ttacagggat ccagaattta ctaggacggg tacgttgaaa agagaatcag atgtatacag
     3181 tttaggagta attatgtttg aaattttgtg tgggaggaca gccgataatc gcattttcaa
     3241 aaaggggagt gacactgggc tggcatctgt ggcaaggaga tgcttccatg atggaacaat
     3301 gcaagaaatc attgatccta tacttaagaa tggaatcggt gagaacaatt tttccctaaa
     3361 taaaggaccc aacaaaaagt ctctcaatgc atttctggaa attgcataca agtgtttagg
     3421 ggaaactcaa gatcaacgtc caacatcaat aggtgttgta gaggagctcg agaaagcctt
     3481 atattttcaa gaaaacaacg atgacggcga cctccggatt acacttgaag atataaagtt
     3541 ggccactaaa aacttccatg ttagcaattg tgttggtgga ggaggatttg gaaatgttta
     3601 taaaggaaaa cttccactaa gtgatgatac aattgttgca aagaaattgg atacaagaag
     3661 tcgtcaaggg gaacaacaat ttcgcaatga gctccaaatt ctttttgagt ataagcacga
     3721 aaatatcatc agtcttgtag gctattgtga tcaagaagat gcaaaaatca ttgtttatgc
     3781 gtatgcacct agaggaagtc ttgatagata tttgagcgat ggtcgtctag attggataaa
     3841 aagacttaac atatgtattg atgttgcaac cgcattgaat tttcttcata gaggaatcgg
     3901 aaaacaagca acagtgatac atagggacat caaaactgct aatgttctac taacgagtga
     3961 ctggaaagca aaacttgccg attttgggct ttccttgata agtgcaatac ataacgaaac
     4021 tgattacgtt atcaatcgtg cgtgtggcac accgggctac gtggatccac tttacttaaa
     4081 atcaggattc ttaaccaaag aatcggatat atattcattt ggtgttgttt tatttgagat
     4141 gttgtgtgga agatcaacgt ttgagaccca caaacgggaa ggtatgtata taccaagttt
     4201 cattaaacac aactttgaaa atgaaaaacg tgaggaggtg gtgtttgaga aaataaaagc
     4261 acagatcatg ccgaaagcat tgactgcatt ccgaaaagtt gcgtaccggt gcttacgtga
     4321 tgatagagaa agacgaccaa aagcaaaaga agttgtaaaa caacttaaga aggcattgag
     4381 atttcaaatg ctgacagatg atttagcttc taccacaagt agctagtatc aactgcaaga
     4441 ttggaattca aaagtttgtt ttcaagcctt tttaaagaat ctagtggttc ctgttgtcag
     4501 tgttttctat acagtagtat ttggaagaag ataaaaggtg tcttttggat atgacaaaat
     4561 ctcatttatc ccttaactac taacagcctc gcaggatttc gtcgtacgag ttttatatca
     4621 ccatcgtttt atattgagtg ttcacaccac ataaacccta aatatagcac atagtcatcg
     4681 ccttcttctg acctccactt ccttctatac catattttcc ccacgctctt tcatcatctc
     4741 ctccttacat cctcatctcc ctcatatcca tcaacagact tctacataat tacacaggca
     4801 aggagtctgg atcgttagaa cacaaaagga taaaccaaca cctcagctaa attggacatc
     4861 ctgccttaag gaactcaagt tcgtacaacc ctgctgtaac attcaaggaa accaataaca
     4921 aaatggaatg aacagctaaa agtgcgttca attaaaatcg ttcagggact tagtggaagg
     4981 tgctcttaat gatggcaata gttggagaat ctatggtcag aaggagatct tagattctaa
     5041 tcatccatgt gggaagaaaa ccgaccaagg atccataaac aatacatgta attgagaaaa
     5101 gcaatcaact tagcgaaggg ttggaccatg ttattcttac aagtagttca taagctcatt
     5161 gaagctgctt ttgcggaaga gtttcaacga acgcttcatc aatcggccta aaaggaaaaa
     5221 acgtgcaaca cttaactaac agttatttta caaattgcgg aggacaaaaa agatatgatg
     5281 acggatatat ttgaaccggg ttgagcaaca acagaaaaac gcttcattca aggttataac
     5341 aaacactagc tctatttcaa ttgtagcagt ggggctgacc tatgccaatt caggtttaga
     5401 gcctgaagga acagacacaa accaaatgaa gaagaaaagg gaatagcaca tcaacagcac
     5461 catattttga tagcaacagc tttggacaat aacagctttt gaaaactcaa gattcctcaa
     5521 tcagaaaacc aatctcatcc ctggtgactc aaatgggctg ctaagagctg atcattggag
     5581 tgtatatacc aatagtacat acatctaaaa gctgtgtatt atacgagtac
//
LOCUS       XM_071885909            5373 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903978), transcript variant X5, mRNA.
ACCESSION   XM_071885909
VERSION     XM_071885909.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5373
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5373
                     /gene="LOC139903978"
                     /note="uncharacterized LOC139903978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903978"
     CDS             434..4426
                     /gene="LOC139903978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742010.1"
                     /db_xref="GeneID:139903978"
                     /translation="MASTITEFSHLQISLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     KFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYIDPSIQKTRGVTYKSDVYSFGVVL
                     WEVLCGRKAFITNGNDKFLAPVARFHYEDNTVNAIMLTWLLQNRLSLDSVQTFTSVAY
                     SCLNDERVLRPDMTHVIYELEKALEFQLPYEIYIRNTLEHVKFQVSDLKIRLADIMLA
                     TDNFSEAYHIGGTIYYDLYKSELELFDKENVATLEEKNSSELSKTRVTVVIKRVFPRK
                     DIRGDVFATELEMLKICNHCNIVTLLGVCDEGSETILVFEHASNGYLREYLFNIKNRP
                     ILTWAQRLKICLDVSHAINYLHYEVENQKAIINCDIRSATIVLDENWGAKIADFGFSV
                     FLPPNLDALELNCILGYDCSVDPEFEETGKLTRESDVYGFGVVLFEILCGRIANDDAF
                     TKESDRGLAFVVRRCFHDGTLKEMIDPIINNECKKDSLDIFIKIAYQCLSKTQDQRPT
                     IKVVIKELERALSLQEDQVQCQEIDKVVEEFWKSVEPTNENLMLKKDAVVRYSWDNSK
                     DLPYAYLNIRRSDILLATDYFSKACIIGNDGLYDLYKAELLVFDQEIFALAEEKNKGE
                     VPKRLTTVCLKCFHKRDENTEFLFRHSFMMYLSCNKHRNIGNLLGLCDEGSEMILVLE
                     YPSNGFLYDYLKKIKDNPILTWAQRLRICLDVAYGLKYLHYEIGDQKAIIHRELRSSC
                     IGLDENWGAKILDHGFTRFSPNEDGDALHFKFKYHLSPTSYRDPEFTRTGTLKRESDV
                     YSLGVIMFEILCGRTADNRIFKKGSDTGLASVARRCFHDGTMQEIIDPILKNGIGENN
                     FSLNKGPNKKSLNAFLEIAYKCLGETQDQRPTSIGVVEELEKALYFQENNDDGDLRIT
                     LEDIKLATKNFHVSNCVGGGGFGNVYKGKLPLSDDTIVAKKLDTRSRQGEQQFRNELQ
                     ILFEYKHENIISLVGYCDQEDAKIIVYAYAPRGSLDRYLSDGRLDWIKRLNICIDVAT
                     ALNFLHRGIGKQATVIHRDIKTANVLLTSDWKAKLADFGLSLISAIHNETDYVINRAC
                     GTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYIPSFIKHNFE
                     NEKREEVVFEKIKAQIMPKALTAFRKVAYRCLRDDRERRPKAKEVVKQLKKALRFQML
                     TDDLASTTSS"
     misc_feature    524..1327
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(524..535,542..544,548..550,593..595,599..601,
                     683..685,731..742,881..883,893..898,902..904,932..937)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1574..2335
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2558..3475
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2558..2569,2576..2578,2582..2584,2654..2656,
                     2660..2662,2774..2776,2822..2833,2984..2986,2996..3001,
                     3005..3007,3035..3040)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3572..4372
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3572..3583,3590..3592,3596..3598,3638..3640,
                     3641..3643,3728..3730,3776..3787,3926..3928,3938..3943,
                     3947..3949,3977..3982)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aaaattcatt ccattcagat tcattcacta atccccaaat tcattcatcc ccggaattcg
       61 cacaatgaaa gacacacaac caccgccgga tcaaccatca ataccgtcgc aaccacgaga
      121 cccatacata caccttcgcc atgaacgatt gaagaacggc ctaattccct tacaaaaact
      181 cattttcacc gacggcatat aaaccctaac ttctatatgt gacaaactac ttcaattaca
      241 ctcaccatat atccaaattg accacgttat cgtttctgaa accctaacga tctcaatgat
      301 tatgatctga ttttattact tagtcatata aacggttgct tcctagtggt cataagattt
      361 ctgctgctgt tgttgctgat gtttgtcctt ctatttatgc tttcaatgga ttcttatctg
      421 cgctttacag aatatggcat ctacaatcac ggagtttagt cacttacaaa tctcacttga
      481 agacgtccta gaagccacca atcactttga tgataaaaat gtcatcggcc atggtgggtt
      541 gggcaaggtt tataaaggaa agctcttgcg gtcagggaag tgggtaaata ttgctgcacg
      601 gagattagac agtaagcata agcgaggcat cgagttttgg acagagattt ctgctctttc
      661 tagtctcaaa catgaaaaca tagtctctat tatcggattt tgcgatgaaa aaggggagaa
      721 ggtgatcata aacaagcatg aggccaagag aagtctcgtg atgtatctaa gcaatccaac
      781 cctctcatgg gttcaaagat tgaagatttg tgttggagtt gcgcgtgcat taagttacat
      841 ccattatgaa aatggacgga gttactcggt gatacatcgt aacatcaaca gctctacaat
      901 acttttagat aataaatttg agccaaagtt atctggtttt gaatattcca tcaaccattc
      961 ggtacaacga atggatcagg ttctcttctc agaagccatt ggaacgacag gatatatcga
     1021 tccgtcaatt caaaagacca gaggtgtgac ctacaagtca gacgtctact catttggtgt
     1081 tgttttatgg gaagtattat gcggtaggaa agcgttcatt acaaatggga atgataagtt
     1141 tctagctcca gtagccagat ttcactatga agacaataca gtaaatgcta taatgctaac
     1201 ttggctgcta cagaaccgat tgtccctgga ctcagtccag accttcacat cagtagctta
     1261 ttcctgctta aacgatgaga gagtacttcg cccggatatg acccatgtta tctacgaact
     1321 tgagaaagca ttagaatttc agctgccata tgaaatctat attagaaaca ccttggaaca
     1381 cgtaaaattc caagtgagtg acttgaagat tagacttgct gacataatgt tggccacaga
     1441 taacttttct gaagcatacc acatcggggg taccatatac tacgacttgt acaaatcaga
     1501 acttgagctt ttcgataaag aaaatgttgc cactttagaa gagaagaata gtagtgaact
     1561 atccaagaca cgtgtcactg tagttataaa acgtgtcttc cctagaaaag acattcgagg
     1621 agacgtattt gctacagaac tggaaatgct taaaatttgt aatcattgca acatagtcac
     1681 cttacttgga gtttgtgatg aaggttctga gacgattctc gtttttgagc atgcttctaa
     1741 tgggtatctt cgtgaatatt tgtttaatat aaaaaacagg cctattctta cttgggcaca
     1801 acgtttgaaa atatgccttg atgtttcaca tgctataaat tatctacact atgaggtgga
     1861 aaatcaaaag gcgattataa actgtgatat aaggagcgcc acaattgttt tagatgagaa
     1921 ttggggtgca aagattgctg actttggttt ctctgtattc cttcctccaa atttagatgc
     1981 tctcgaactc aattgtatcc ttggctatga ttgttctgtc gatccagaat ttgaggagac
     2041 gggcaagtta acacgagaat cggatgtata tggttttgga gtagttttgt ttgaaatttt
     2101 atgtgggagg atagccaatg atgatgcttt tactaaggag agtgacagag gactggcatt
     2161 tgttgtacgg cgatgcttcc atgatggtac actaaaggaa atgatagatc ctataattaa
     2221 taatgagtgt aaaaaagatt ctttagacat attcataaaa attgcatatc agtgtctctc
     2281 aaaaactcaa gaccaacgtc caacaatcaa agtcgtcatt aaagagctag agagagcatt
     2341 atctttgcaa gaggatcaag tacaatgcca agagatcgac aaagttgttg aagaattttg
     2401 gaaatcggta gaaccgacaa atgaaaatct tatgttaaag aaagatgcag ttgtacgtta
     2461 ttcttgggat aacagtaagg atcttcccta tgcataccta aatattcgac ggagtgatat
     2521 acttttggcc accgattact tttctaaggc atgcattatt gggaatgatg gattatatga
     2581 cttgtacaaa gcagaacttt tggtttttga tcaagaaata ttcgccttag cagaagagaa
     2641 aaataaaggt gaagtaccaa agagactcac tactgtatgt ttgaaatgct tccacaaaag
     2701 agatgagaat acagaatttc tatttcgtca cagttttatg atgtatctaa gttgtaataa
     2761 gcatcgcaac atagggaatc tacttggatt gtgtgatgaa ggttctgaaa tgatcctcgt
     2821 tttggagtat ccttctaatg gttttcttta cgattatttg aaaaaaatca aagacaaccc
     2881 tattcttact tgggcacaac gtttgagaat atgtcttgat gttgcatatg gattaaagta
     2941 cctacactat gaaatcggag accaaaaggc gataatacac cgtgaattaa ggagtagttg
     3001 cattgggttg gatgaaaatt ggggggcgaa gattcttgac catggtttca cgagattcag
     3061 tccgaatgaa gatggtgatg ctctacattt taaatttaag tatcatttaa gtcctactag
     3121 ttacagggat ccagaattta ctaggacggg tacgttgaaa agagaatcag atgtatacag
     3181 tttaggagta attatgtttg aaattttgtg tgggaggaca gccgataatc gcattttcaa
     3241 aaaggggagt gacactgggc tggcatctgt ggcaaggaga tgcttccatg atggaacaat
     3301 gcaagaaatc attgatccta tacttaagaa tggaatcggt gagaacaatt tttccctaaa
     3361 taaaggaccc aacaaaaagt ctctcaatgc atttctggaa attgcataca agtgtttagg
     3421 ggaaactcaa gatcaacgtc caacatcaat aggtgttgta gaggagctcg agaaagcctt
     3481 atattttcaa gaaaacaacg atgacggcga cctccggatt acacttgaag atataaagtt
     3541 ggccactaaa aacttccatg ttagcaattg tgttggtgga ggaggatttg gaaatgttta
     3601 taaaggaaaa cttccactaa gtgatgatac aattgttgca aagaaattgg atacaagaag
     3661 tcgtcaaggg gaacaacaat ttcgcaatga gctccaaatt ctttttgagt ataagcacga
     3721 aaatatcatc agtcttgtag gctattgtga tcaagaagat gcaaaaatca ttgtttatgc
     3781 gtatgcacct agaggaagtc ttgatagata tttgagcgat ggtcgtctag attggataaa
     3841 aagacttaac atatgtattg atgttgcaac cgcattgaat tttcttcata gaggaatcgg
     3901 aaaacaagca acagtgatac atagggacat caaaactgct aatgttctac taacgagtga
     3961 ctggaaagca aaacttgccg attttgggct ttccttgata agtgcaatac ataacgaaac
     4021 tgattacgtt atcaatcgtg cgtgtggcac accgggctac gtggatccac tttacttaaa
     4081 atcaggattc ttaaccaaag aatcggatat atattcattt ggtgttgttt tatttgagat
     4141 gttgtgtgga agatcaacgt ttgagaccca caaacgggaa ggtatgtata taccaagttt
     4201 cattaaacac aactttgaaa atgaaaaacg tgaggaggtg gtgtttgaga aaataaaagc
     4261 acagatcatg ccgaaagcat tgactgcatt ccgaaaagtt gcgtaccggt gcttacgtga
     4321 tgatagagaa agacgaccaa aagcaaaaga agttgtaaaa caacttaaga aggcattgag
     4381 atttcaaatg ctgacagatg atttagcttc taccacaagt agctagtatc aactgcaaga
     4441 ttggaattca aaagtttgtt ttcaagcctt tttaaagaat ctagtggttc ctgttgtcag
     4501 gcaaggagtc tggatcgtta gaacacaaaa ggataaacca acacctcagc taaattggac
     4561 atcctgcctt aaggaactca agttcgtaca accctgctgt aacattcaag gaaaccaata
     4621 acaaaatgga atgaacagct aaaagtgcgt tcaattaaaa tcgttcaggg acttagtgga
     4681 aggtgctctt aatgatggca atagttggag aatctatggt cagaaggaga tcttagattc
     4741 taatcatcca tgtgggaaga aaaccgacca aggatccata aacaatacat gtaattgaga
     4801 aaagcaatca acttagcgaa gggttggacc atgttattct tacaagtagt tcataagctc
     4861 attgaagctg cttttgcgga agagtttcaa cgaacgcttc atcaatcggc ctaaaaggaa
     4921 aaaacgtgca acacttaact aacagttatt ttacaaattg cggaggacaa aaaagatatg
     4981 atgacggata tatttgaacc gggttgagca acaacagaaa aacgcttcat tcaaggttat
     5041 aacaaacact agctctattt caattgtagc agtggggctg acctatgcca attcaggttt
     5101 agagcctgaa ggaacagaca caaaccaaat gaagaagaaa agggaatagc acatcaacag
     5161 caccatattt tgatagcaac agctttggac aataacagct tttgaaaact caagattcct
     5221 caatcagaaa accaatctca tccctggtat atcaacaact catatattag aaattgtaag
     5281 ataaatggta tatacatctc ataaatgttc aaatataaaa agcttcaaca gctttggaaa
     5341 tattagtttt aacaatgcgt tacatattaa tat
//
LOCUS       XM_071885910            5263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903978), transcript variant X6, mRNA.
ACCESSION   XM_071885910
VERSION     XM_071885910.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5263
                     /gene="LOC139903978"
                     /note="uncharacterized LOC139903978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903978"
     CDS             434..4426
                     /gene="LOC139903978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742011.1"
                     /db_xref="GeneID:139903978"
                     /translation="MASTITEFSHLQISLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     KFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYIDPSIQKTRGVTYKSDVYSFGVVL
                     WEVLCGRKAFITNGNDKFLAPVARFHYEDNTVNAIMLTWLLQNRLSLDSVQTFTSVAY
                     SCLNDERVLRPDMTHVIYELEKALEFQLPYEIYIRNTLEHVKFQVSDLKIRLADIMLA
                     TDNFSEAYHIGGTIYYDLYKSELELFDKENVATLEEKNSSELSKTRVTVVIKRVFPRK
                     DIRGDVFATELEMLKICNHCNIVTLLGVCDEGSETILVFEHASNGYLREYLFNIKNRP
                     ILTWAQRLKICLDVSHAINYLHYEVENQKAIINCDIRSATIVLDENWGAKIADFGFSV
                     FLPPNLDALELNCILGYDCSVDPEFEETGKLTRESDVYGFGVVLFEILCGRIANDDAF
                     TKESDRGLAFVVRRCFHDGTLKEMIDPIINNECKKDSLDIFIKIAYQCLSKTQDQRPT
                     IKVVIKELERALSLQEDQVQCQEIDKVVEEFWKSVEPTNENLMLKKDAVVRYSWDNSK
                     DLPYAYLNIRRSDILLATDYFSKACIIGNDGLYDLYKAELLVFDQEIFALAEEKNKGE
                     VPKRLTTVCLKCFHKRDENTEFLFRHSFMMYLSCNKHRNIGNLLGLCDEGSEMILVLE
                     YPSNGFLYDYLKKIKDNPILTWAQRLRICLDVAYGLKYLHYEIGDQKAIIHRELRSSC
                     IGLDENWGAKILDHGFTRFSPNEDGDALHFKFKYHLSPTSYRDPEFTRTGTLKRESDV
                     YSLGVIMFEILCGRTADNRIFKKGSDTGLASVARRCFHDGTMQEIIDPILKNGIGENN
                     FSLNKGPNKKSLNAFLEIAYKCLGETQDQRPTSIGVVEELEKALYFQENNDDGDLRIT
                     LEDIKLATKNFHVSNCVGGGGFGNVYKGKLPLSDDTIVAKKLDTRSRQGEQQFRNELQ
                     ILFEYKHENIISLVGYCDQEDAKIIVYAYAPRGSLDRYLSDGRLDWIKRLNICIDVAT
                     ALNFLHRGIGKQATVIHRDIKTANVLLTSDWKAKLADFGLSLISAIHNETDYVINRAC
                     GTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYIPSFIKHNFE
                     NEKREEVVFEKIKAQIMPKALTAFRKVAYRCLRDDRERRPKAKEVVKQLKKALRFQML
                     TDDLASTTSS"
     misc_feature    524..1327
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(524..535,542..544,548..550,593..595,599..601,
                     683..685,731..742,881..883,893..898,902..904,932..937)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1574..2335
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2558..3475
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2558..2569,2576..2578,2582..2584,2654..2656,
                     2660..2662,2774..2776,2822..2833,2984..2986,2996..3001,
                     3005..3007,3035..3040)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3572..4372
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3572..3583,3590..3592,3596..3598,3638..3640,
                     3641..3643,3728..3730,3776..3787,3926..3928,3938..3943,
                     3947..3949,3977..3982)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aaaattcatt ccattcagat tcattcacta atccccaaat tcattcatcc ccggaattcg
       61 cacaatgaaa gacacacaac caccgccgga tcaaccatca ataccgtcgc aaccacgaga
      121 cccatacata caccttcgcc atgaacgatt gaagaacggc ctaattccct tacaaaaact
      181 cattttcacc gacggcatat aaaccctaac ttctatatgt gacaaactac ttcaattaca
      241 ctcaccatat atccaaattg accacgttat cgtttctgaa accctaacga tctcaatgat
      301 tatgatctga ttttattact tagtcatata aacggttgct tcctagtggt cataagattt
      361 ctgctgctgt tgttgctgat gtttgtcctt ctatttatgc tttcaatgga ttcttatctg
      421 cgctttacag aatatggcat ctacaatcac ggagtttagt cacttacaaa tctcacttga
      481 agacgtccta gaagccacca atcactttga tgataaaaat gtcatcggcc atggtgggtt
      541 gggcaaggtt tataaaggaa agctcttgcg gtcagggaag tgggtaaata ttgctgcacg
      601 gagattagac agtaagcata agcgaggcat cgagttttgg acagagattt ctgctctttc
      661 tagtctcaaa catgaaaaca tagtctctat tatcggattt tgcgatgaaa aaggggagaa
      721 ggtgatcata aacaagcatg aggccaagag aagtctcgtg atgtatctaa gcaatccaac
      781 cctctcatgg gttcaaagat tgaagatttg tgttggagtt gcgcgtgcat taagttacat
      841 ccattatgaa aatggacgga gttactcggt gatacatcgt aacatcaaca gctctacaat
      901 acttttagat aataaatttg agccaaagtt atctggtttt gaatattcca tcaaccattc
      961 ggtacaacga atggatcagg ttctcttctc agaagccatt ggaacgacag gatatatcga
     1021 tccgtcaatt caaaagacca gaggtgtgac ctacaagtca gacgtctact catttggtgt
     1081 tgttttatgg gaagtattat gcggtaggaa agcgttcatt acaaatggga atgataagtt
     1141 tctagctcca gtagccagat ttcactatga agacaataca gtaaatgcta taatgctaac
     1201 ttggctgcta cagaaccgat tgtccctgga ctcagtccag accttcacat cagtagctta
     1261 ttcctgctta aacgatgaga gagtacttcg cccggatatg acccatgtta tctacgaact
     1321 tgagaaagca ttagaatttc agctgccata tgaaatctat attagaaaca ccttggaaca
     1381 cgtaaaattc caagtgagtg acttgaagat tagacttgct gacataatgt tggccacaga
     1441 taacttttct gaagcatacc acatcggggg taccatatac tacgacttgt acaaatcaga
     1501 acttgagctt ttcgataaag aaaatgttgc cactttagaa gagaagaata gtagtgaact
     1561 atccaagaca cgtgtcactg tagttataaa acgtgtcttc cctagaaaag acattcgagg
     1621 agacgtattt gctacagaac tggaaatgct taaaatttgt aatcattgca acatagtcac
     1681 cttacttgga gtttgtgatg aaggttctga gacgattctc gtttttgagc atgcttctaa
     1741 tgggtatctt cgtgaatatt tgtttaatat aaaaaacagg cctattctta cttgggcaca
     1801 acgtttgaaa atatgccttg atgtttcaca tgctataaat tatctacact atgaggtgga
     1861 aaatcaaaag gcgattataa actgtgatat aaggagcgcc acaattgttt tagatgagaa
     1921 ttggggtgca aagattgctg actttggttt ctctgtattc cttcctccaa atttagatgc
     1981 tctcgaactc aattgtatcc ttggctatga ttgttctgtc gatccagaat ttgaggagac
     2041 gggcaagtta acacgagaat cggatgtata tggttttgga gtagttttgt ttgaaatttt
     2101 atgtgggagg atagccaatg atgatgcttt tactaaggag agtgacagag gactggcatt
     2161 tgttgtacgg cgatgcttcc atgatggtac actaaaggaa atgatagatc ctataattaa
     2221 taatgagtgt aaaaaagatt ctttagacat attcataaaa attgcatatc agtgtctctc
     2281 aaaaactcaa gaccaacgtc caacaatcaa agtcgtcatt aaagagctag agagagcatt
     2341 atctttgcaa gaggatcaag tacaatgcca agagatcgac aaagttgttg aagaattttg
     2401 gaaatcggta gaaccgacaa atgaaaatct tatgttaaag aaagatgcag ttgtacgtta
     2461 ttcttgggat aacagtaagg atcttcccta tgcataccta aatattcgac ggagtgatat
     2521 acttttggcc accgattact tttctaaggc atgcattatt gggaatgatg gattatatga
     2581 cttgtacaaa gcagaacttt tggtttttga tcaagaaata ttcgccttag cagaagagaa
     2641 aaataaaggt gaagtaccaa agagactcac tactgtatgt ttgaaatgct tccacaaaag
     2701 agatgagaat acagaatttc tatttcgtca cagttttatg atgtatctaa gttgtaataa
     2761 gcatcgcaac atagggaatc tacttggatt gtgtgatgaa ggttctgaaa tgatcctcgt
     2821 tttggagtat ccttctaatg gttttcttta cgattatttg aaaaaaatca aagacaaccc
     2881 tattcttact tgggcacaac gtttgagaat atgtcttgat gttgcatatg gattaaagta
     2941 cctacactat gaaatcggag accaaaaggc gataatacac cgtgaattaa ggagtagttg
     3001 cattgggttg gatgaaaatt ggggggcgaa gattcttgac catggtttca cgagattcag
     3061 tccgaatgaa gatggtgatg ctctacattt taaatttaag tatcatttaa gtcctactag
     3121 ttacagggat ccagaattta ctaggacggg tacgttgaaa agagaatcag atgtatacag
     3181 tttaggagta attatgtttg aaattttgtg tgggaggaca gccgataatc gcattttcaa
     3241 aaaggggagt gacactgggc tggcatctgt ggcaaggaga tgcttccatg atggaacaat
     3301 gcaagaaatc attgatccta tacttaagaa tggaatcggt gagaacaatt tttccctaaa
     3361 taaaggaccc aacaaaaagt ctctcaatgc atttctggaa attgcataca agtgtttagg
     3421 ggaaactcaa gatcaacgtc caacatcaat aggtgttgta gaggagctcg agaaagcctt
     3481 atattttcaa gaaaacaacg atgacggcga cctccggatt acacttgaag atataaagtt
     3541 ggccactaaa aacttccatg ttagcaattg tgttggtgga ggaggatttg gaaatgttta
     3601 taaaggaaaa cttccactaa gtgatgatac aattgttgca aagaaattgg atacaagaag
     3661 tcgtcaaggg gaacaacaat ttcgcaatga gctccaaatt ctttttgagt ataagcacga
     3721 aaatatcatc agtcttgtag gctattgtga tcaagaagat gcaaaaatca ttgtttatgc
     3781 gtatgcacct agaggaagtc ttgatagata tttgagcgat ggtcgtctag attggataaa
     3841 aagacttaac atatgtattg atgttgcaac cgcattgaat tttcttcata gaggaatcgg
     3901 aaaacaagca acagtgatac atagggacat caaaactgct aatgttctac taacgagtga
     3961 ctggaaagca aaacttgccg attttgggct ttccttgata agtgcaatac ataacgaaac
     4021 tgattacgtt atcaatcgtg cgtgtggcac accgggctac gtggatccac tttacttaaa
     4081 atcaggattc ttaaccaaag aatcggatat atattcattt ggtgttgttt tatttgagat
     4141 gttgtgtgga agatcaacgt ttgagaccca caaacgggaa ggtatgtata taccaagttt
     4201 cattaaacac aactttgaaa atgaaaaacg tgaggaggtg gtgtttgaga aaataaaagc
     4261 acagatcatg ccgaaagcat tgactgcatt ccgaaaagtt gcgtaccggt gcttacgtga
     4321 tgatagagaa agacgaccaa aagcaaaaga agttgtaaaa caacttaaga aggcattgag
     4381 atttcaaatg ctgacagatg atttagcttc taccacaagt agctagtatc aactgcaaga
     4441 ttggaattca aaagtttgtt ttcaagcctt tttaaagaat ctagtggttc ctgttgtcag
     4501 gaaaccaata acaaaatgga atgaacagct aaaagtgcgt tcaattaaaa tcgttcaggg
     4561 acttagtgga aggtgctctt aatgatggca atagttggag aatctatggt cagaaggaga
     4621 tcttagattc taatcatcca tgtgggaaga aaaccgacca aggatccata aacaatacat
     4681 gtaattgaga aaagcaatca acttagcgaa gggttggacc atgttattct tacaagtagt
     4741 tcataagctc attgaagctg cttttgcgga agagtttcaa cgaacgcttc atcaatcggc
     4801 ctaaaaggaa aaaacgtgca acacttaact aacagttatt ttacaaattg cggaggacaa
     4861 aaaagatatg atgacggata tatttgaacc gggttgagca acaacagaaa aacgcttcat
     4921 tcaaggttat aacaaacact agctctattt caattgtagc agtggggctg acctatgcca
     4981 attcaggttt agagcctgaa ggaacagaca caaaccaaat gaagaagaaa agggaatagc
     5041 acatcaacag caccatattt tgatagcaac agctttggac aataacagct tttgaaaact
     5101 caagattcct caatcagaaa accaatctca tccctggtat atcaacaact catatattag
     5161 aaattgtaag ataaatggta tatacatctc ataaatgttc aaatataaaa agcttcaaca
     5221 gctttggaaa tattagtttt aacaatgcgt tacatattaa tat
//
LOCUS       XM_071885911            5612 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903978), transcript variant X7, mRNA.
ACCESSION   XM_071885911
VERSION     XM_071885911.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5612
                     /gene="LOC139903978"
                     /note="uncharacterized LOC139903978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903978"
     CDS             434..4426
                     /gene="LOC139903978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742012.1"
                     /db_xref="GeneID:139903978"
                     /translation="MASTITEFSHLQISLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     KFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYIDPSIQKTRGVTYKSDVYSFGVVL
                     WEVLCGRKAFITNGNDKFLAPVARFHYEDNTVNAIMLTWLLQNRLSLDSVQTFTSVAY
                     SCLNDERVLRPDMTHVIYELEKALEFQLPYEIYIRNTLEHVKFQVSDLKIRLADIMLA
                     TDNFSEAYHIGGTIYYDLYKSELELFDKENVATLEEKNSSELSKTRVTVVIKRVFPRK
                     DIRGDVFATELEMLKICNHCNIVTLLGVCDEGSETILVFEHASNGYLREYLFNIKNRP
                     ILTWAQRLKICLDVSHAINYLHYEVENQKAIINCDIRSATIVLDENWGAKIADFGFSV
                     FLPPNLDALELNCILGYDCSVDPEFEETGKLTRESDVYGFGVVLFEILCGRIANDDAF
                     TKESDRGLAFVVRRCFHDGTLKEMIDPIINNECKKDSLDIFIKIAYQCLSKTQDQRPT
                     IKVVIKELERALSLQEDQVQCQEIDKVVEEFWKSVEPTNENLMLKKDAVVRYSWDNSK
                     DLPYAYLNIRRSDILLATDYFSKACIIGNDGLYDLYKAELLVFDQEIFALAEEKNKGE
                     VPKRLTTVCLKCFHKRDENTEFLFRHSFMMYLSCNKHRNIGNLLGLCDEGSEMILVLE
                     YPSNGFLYDYLKKIKDNPILTWAQRLRICLDVAYGLKYLHYEIGDQKAIIHRELRSSC
                     IGLDENWGAKILDHGFTRFSPNEDGDALHFKFKYHLSPTSYRDPEFTRTGTLKRESDV
                     YSLGVIMFEILCGRTADNRIFKKGSDTGLASVARRCFHDGTMQEIIDPILKNGIGENN
                     FSLNKGPNKKSLNAFLEIAYKCLGETQDQRPTSIGVVEELEKALYFQENNDDGDLRIT
                     LEDIKLATKNFHVSNCVGGGGFGNVYKGKLPLSDDTIVAKKLDTRSRQGEQQFRNELQ
                     ILFEYKHENIISLVGYCDQEDAKIIVYAYAPRGSLDRYLSDGRLDWIKRLNICIDVAT
                     ALNFLHRGIGKQATVIHRDIKTANVLLTSDWKAKLADFGLSLISAIHNETDYVINRAC
                     GTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYIPSFIKHNFE
                     NEKREEVVFEKIKAQIMPKALTAFRKVAYRCLRDDRERRPKAKEVVKQLKKALRFQML
                     TDDLASTTSS"
     misc_feature    524..1327
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(524..535,542..544,548..550,593..595,599..601,
                     683..685,731..742,881..883,893..898,902..904,932..937)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1574..2335
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2558..3475
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2558..2569,2576..2578,2582..2584,2654..2656,
                     2660..2662,2774..2776,2822..2833,2984..2986,2996..3001,
                     3005..3007,3035..3040)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3572..4372
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3572..3583,3590..3592,3596..3598,3638..3640,
                     3641..3643,3728..3730,3776..3787,3926..3928,3938..3943,
                     3947..3949,3977..3982)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aaaattcatt ccattcagat tcattcacta atccccaaat tcattcatcc ccggaattcg
       61 cacaatgaaa gacacacaac caccgccgga tcaaccatca ataccgtcgc aaccacgaga
      121 cccatacata caccttcgcc atgaacgatt gaagaacggc ctaattccct tacaaaaact
      181 cattttcacc gacggcatat aaaccctaac ttctatatgt gacaaactac ttcaattaca
      241 ctcaccatat atccaaattg accacgttat cgtttctgaa accctaacga tctcaatgat
      301 tatgatctga ttttattact tagtcatata aacggttgct tcctagtggt cataagattt
      361 ctgctgctgt tgttgctgat gtttgtcctt ctatttatgc tttcaatgga ttcttatctg
      421 cgctttacag aatatggcat ctacaatcac ggagtttagt cacttacaaa tctcacttga
      481 agacgtccta gaagccacca atcactttga tgataaaaat gtcatcggcc atggtgggtt
      541 gggcaaggtt tataaaggaa agctcttgcg gtcagggaag tgggtaaata ttgctgcacg
      601 gagattagac agtaagcata agcgaggcat cgagttttgg acagagattt ctgctctttc
      661 tagtctcaaa catgaaaaca tagtctctat tatcggattt tgcgatgaaa aaggggagaa
      721 ggtgatcata aacaagcatg aggccaagag aagtctcgtg atgtatctaa gcaatccaac
      781 cctctcatgg gttcaaagat tgaagatttg tgttggagtt gcgcgtgcat taagttacat
      841 ccattatgaa aatggacgga gttactcggt gatacatcgt aacatcaaca gctctacaat
      901 acttttagat aataaatttg agccaaagtt atctggtttt gaatattcca tcaaccattc
      961 ggtacaacga atggatcagg ttctcttctc agaagccatt ggaacgacag gatatatcga
     1021 tccgtcaatt caaaagacca gaggtgtgac ctacaagtca gacgtctact catttggtgt
     1081 tgttttatgg gaagtattat gcggtaggaa agcgttcatt acaaatggga atgataagtt
     1141 tctagctcca gtagccagat ttcactatga agacaataca gtaaatgcta taatgctaac
     1201 ttggctgcta cagaaccgat tgtccctgga ctcagtccag accttcacat cagtagctta
     1261 ttcctgctta aacgatgaga gagtacttcg cccggatatg acccatgtta tctacgaact
     1321 tgagaaagca ttagaatttc agctgccata tgaaatctat attagaaaca ccttggaaca
     1381 cgtaaaattc caagtgagtg acttgaagat tagacttgct gacataatgt tggccacaga
     1441 taacttttct gaagcatacc acatcggggg taccatatac tacgacttgt acaaatcaga
     1501 acttgagctt ttcgataaag aaaatgttgc cactttagaa gagaagaata gtagtgaact
     1561 atccaagaca cgtgtcactg tagttataaa acgtgtcttc cctagaaaag acattcgagg
     1621 agacgtattt gctacagaac tggaaatgct taaaatttgt aatcattgca acatagtcac
     1681 cttacttgga gtttgtgatg aaggttctga gacgattctc gtttttgagc atgcttctaa
     1741 tgggtatctt cgtgaatatt tgtttaatat aaaaaacagg cctattctta cttgggcaca
     1801 acgtttgaaa atatgccttg atgtttcaca tgctataaat tatctacact atgaggtgga
     1861 aaatcaaaag gcgattataa actgtgatat aaggagcgcc acaattgttt tagatgagaa
     1921 ttggggtgca aagattgctg actttggttt ctctgtattc cttcctccaa atttagatgc
     1981 tctcgaactc aattgtatcc ttggctatga ttgttctgtc gatccagaat ttgaggagac
     2041 gggcaagtta acacgagaat cggatgtata tggttttgga gtagttttgt ttgaaatttt
     2101 atgtgggagg atagccaatg atgatgcttt tactaaggag agtgacagag gactggcatt
     2161 tgttgtacgg cgatgcttcc atgatggtac actaaaggaa atgatagatc ctataattaa
     2221 taatgagtgt aaaaaagatt ctttagacat attcataaaa attgcatatc agtgtctctc
     2281 aaaaactcaa gaccaacgtc caacaatcaa agtcgtcatt aaagagctag agagagcatt
     2341 atctttgcaa gaggatcaag tacaatgcca agagatcgac aaagttgttg aagaattttg
     2401 gaaatcggta gaaccgacaa atgaaaatct tatgttaaag aaagatgcag ttgtacgtta
     2461 ttcttgggat aacagtaagg atcttcccta tgcataccta aatattcgac ggagtgatat
     2521 acttttggcc accgattact tttctaaggc atgcattatt gggaatgatg gattatatga
     2581 cttgtacaaa gcagaacttt tggtttttga tcaagaaata ttcgccttag cagaagagaa
     2641 aaataaaggt gaagtaccaa agagactcac tactgtatgt ttgaaatgct tccacaaaag
     2701 agatgagaat acagaatttc tatttcgtca cagttttatg atgtatctaa gttgtaataa
     2761 gcatcgcaac atagggaatc tacttggatt gtgtgatgaa ggttctgaaa tgatcctcgt
     2821 tttggagtat ccttctaatg gttttcttta cgattatttg aaaaaaatca aagacaaccc
     2881 tattcttact tgggcacaac gtttgagaat atgtcttgat gttgcatatg gattaaagta
     2941 cctacactat gaaatcggag accaaaaggc gataatacac cgtgaattaa ggagtagttg
     3001 cattgggttg gatgaaaatt ggggggcgaa gattcttgac catggtttca cgagattcag
     3061 tccgaatgaa gatggtgatg ctctacattt taaatttaag tatcatttaa gtcctactag
     3121 ttacagggat ccagaattta ctaggacggg tacgttgaaa agagaatcag atgtatacag
     3181 tttaggagta attatgtttg aaattttgtg tgggaggaca gccgataatc gcattttcaa
     3241 aaaggggagt gacactgggc tggcatctgt ggcaaggaga tgcttccatg atggaacaat
     3301 gcaagaaatc attgatccta tacttaagaa tggaatcggt gagaacaatt tttccctaaa
     3361 taaaggaccc aacaaaaagt ctctcaatgc atttctggaa attgcataca agtgtttagg
     3421 ggaaactcaa gatcaacgtc caacatcaat aggtgttgta gaggagctcg agaaagcctt
     3481 atattttcaa gaaaacaacg atgacggcga cctccggatt acacttgaag atataaagtt
     3541 ggccactaaa aacttccatg ttagcaattg tgttggtgga ggaggatttg gaaatgttta
     3601 taaaggaaaa cttccactaa gtgatgatac aattgttgca aagaaattgg atacaagaag
     3661 tcgtcaaggg gaacaacaat ttcgcaatga gctccaaatt ctttttgagt ataagcacga
     3721 aaatatcatc agtcttgtag gctattgtga tcaagaagat gcaaaaatca ttgtttatgc
     3781 gtatgcacct agaggaagtc ttgatagata tttgagcgat ggtcgtctag attggataaa
     3841 aagacttaac atatgtattg atgttgcaac cgcattgaat tttcttcata gaggaatcgg
     3901 aaaacaagca acagtgatac atagggacat caaaactgct aatgttctac taacgagtga
     3961 ctggaaagca aaacttgccg attttgggct ttccttgata agtgcaatac ataacgaaac
     4021 tgattacgtt atcaatcgtg cgtgtggcac accgggctac gtggatccac tttacttaaa
     4081 atcaggattc ttaaccaaag aatcggatat atattcattt ggtgttgttt tatttgagat
     4141 gttgtgtgga agatcaacgt ttgagaccca caaacgggaa ggtatgtata taccaagttt
     4201 cattaaacac aactttgaaa atgaaaaacg tgaggaggtg gtgtttgaga aaataaaagc
     4261 acagatcatg ccgaaagcat tgactgcatt ccgaaaagtt gcgtaccggt gcttacgtga
     4321 tgatagagaa agacgaccaa aagcaaaaga agttgtaaaa caacttaaga aggcattgag
     4381 atttcaaatg ctgacagatg atttagcttc taccacaagt agctagtatc aactgcaaga
     4441 ttggaattca aaagtttgtt ttcaagcctt tttaaagaat ctagtggttc ctgttgtcag
     4501 tgttttctat acagtagtat ttggaagaag ataaaaggtg tcttttggat atgacaaaat
     4561 ctcatttatc ccttaactac taacagcctc gcaggatttc gtcgtacgag ttttatatca
     4621 ccatcgtttt atattgagtg ttcacaccac ataaacccta aatatagcac atagtcatcg
     4681 ccttcttctg acctccactt ccttctatac catattttcc ccacgctctt tcatcatctc
     4741 ctccttacat cctcatctcc ctcatatcca tcaacagact tctacataat tacacaggca
     4801 aggagtctgg atcgttagaa cacaaaagga taaaccaaca cctcagctaa attggacatc
     4861 ctgccttaag gaactcaagt tcgtacaacc ctgctgtaac attcaaggga cttagtggaa
     4921 ggtgctctta atgatggcaa tagttggaga atctatggtc agaaggagat cttagattct
     4981 aatcatccat gtgggaagaa aaccgaccaa ggatccataa acaatacatg taattgagaa
     5041 aagcaatcaa cttagcgaag ggttggacca tgttattctt acaagtagtt cataagctca
     5101 ttgaagctgc ttttgcggaa gagtttcaac gaacgcttca tcaatcggcc taaaaggaaa
     5161 aaacgtgcaa cacttaacta acagttattt tacaaattgc ggaggacaaa aaagatatga
     5221 tgacggatat atttgaaccg ggttgagcaa caacagaaaa acgcttcatt caaggttata
     5281 acaaacacta gctctatttc aattgtagca gtggggctga cctatgccaa ttcaggttta
     5341 gagcctgaag gaacagacac aaaccaaatg aagaagaaaa gggaatagca catcaacagc
     5401 accatatttt gatagcaaca gctttggaca ataacagctt ttgaaaactc aagattcctc
     5461 aatcagaaaa ccaatctcat ccctggtata tcaacaactc atatattaga aattgtaaga
     5521 taaatggtat atacatctca taaatgttca aatataaaaa gcttcaacag ctttggaaat
     5581 attagtttta acaatgcgtt acatattaat at
//
LOCUS       XM_071885912            5205 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903978), transcript variant X8, mRNA.
ACCESSION   XM_071885912
VERSION     XM_071885912.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5205
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5205
                     /gene="LOC139903978"
                     /note="uncharacterized LOC139903978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903978"
     CDS             434..4426
                     /gene="LOC139903978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742013.1"
                     /db_xref="GeneID:139903978"
                     /translation="MASTITEFSHLQISLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     KFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYIDPSIQKTRGVTYKSDVYSFGVVL
                     WEVLCGRKAFITNGNDKFLAPVARFHYEDNTVNAIMLTWLLQNRLSLDSVQTFTSVAY
                     SCLNDERVLRPDMTHVIYELEKALEFQLPYEIYIRNTLEHVKFQVSDLKIRLADIMLA
                     TDNFSEAYHIGGTIYYDLYKSELELFDKENVATLEEKNSSELSKTRVTVVIKRVFPRK
                     DIRGDVFATELEMLKICNHCNIVTLLGVCDEGSETILVFEHASNGYLREYLFNIKNRP
                     ILTWAQRLKICLDVSHAINYLHYEVENQKAIINCDIRSATIVLDENWGAKIADFGFSV
                     FLPPNLDALELNCILGYDCSVDPEFEETGKLTRESDVYGFGVVLFEILCGRIANDDAF
                     TKESDRGLAFVVRRCFHDGTLKEMIDPIINNECKKDSLDIFIKIAYQCLSKTQDQRPT
                     IKVVIKELERALSLQEDQVQCQEIDKVVEEFWKSVEPTNENLMLKKDAVVRYSWDNSK
                     DLPYAYLNIRRSDILLATDYFSKACIIGNDGLYDLYKAELLVFDQEIFALAEEKNKGE
                     VPKRLTTVCLKCFHKRDENTEFLFRHSFMMYLSCNKHRNIGNLLGLCDEGSEMILVLE
                     YPSNGFLYDYLKKIKDNPILTWAQRLRICLDVAYGLKYLHYEIGDQKAIIHRELRSSC
                     IGLDENWGAKILDHGFTRFSPNEDGDALHFKFKYHLSPTSYRDPEFTRTGTLKRESDV
                     YSLGVIMFEILCGRTADNRIFKKGSDTGLASVARRCFHDGTMQEIIDPILKNGIGENN
                     FSLNKGPNKKSLNAFLEIAYKCLGETQDQRPTSIGVVEELEKALYFQENNDDGDLRIT
                     LEDIKLATKNFHVSNCVGGGGFGNVYKGKLPLSDDTIVAKKLDTRSRQGEQQFRNELQ
                     ILFEYKHENIISLVGYCDQEDAKIIVYAYAPRGSLDRYLSDGRLDWIKRLNICIDVAT
                     ALNFLHRGIGKQATVIHRDIKTANVLLTSDWKAKLADFGLSLISAIHNETDYVINRAC
                     GTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYIPSFIKHNFE
                     NEKREEVVFEKIKAQIMPKALTAFRKVAYRCLRDDRERRPKAKEVVKQLKKALRFQML
                     TDDLASTTSS"
     misc_feature    524..1327
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(524..535,542..544,548..550,593..595,599..601,
                     683..685,731..742,881..883,893..898,902..904,932..937)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1574..2335
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2558..3475
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2558..2569,2576..2578,2582..2584,2654..2656,
                     2660..2662,2774..2776,2822..2833,2984..2986,2996..3001,
                     3005..3007,3035..3040)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3572..4372
                     /gene="LOC139903978"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3572..3583,3590..3592,3596..3598,3638..3640,
                     3641..3643,3728..3730,3776..3787,3926..3928,3938..3943,
                     3947..3949,3977..3982)
                     /gene="LOC139903978"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aaaattcatt ccattcagat tcattcacta atccccaaat tcattcatcc ccggaattcg
       61 cacaatgaaa gacacacaac caccgccgga tcaaccatca ataccgtcgc aaccacgaga
      121 cccatacata caccttcgcc atgaacgatt gaagaacggc ctaattccct tacaaaaact
      181 cattttcacc gacggcatat aaaccctaac ttctatatgt gacaaactac ttcaattaca
      241 ctcaccatat atccaaattg accacgttat cgtttctgaa accctaacga tctcaatgat
      301 tatgatctga ttttattact tagtcatata aacggttgct tcctagtggt cataagattt
      361 ctgctgctgt tgttgctgat gtttgtcctt ctatttatgc tttcaatgga ttcttatctg
      421 cgctttacag aatatggcat ctacaatcac ggagtttagt cacttacaaa tctcacttga
      481 agacgtccta gaagccacca atcactttga tgataaaaat gtcatcggcc atggtgggtt
      541 gggcaaggtt tataaaggaa agctcttgcg gtcagggaag tgggtaaata ttgctgcacg
      601 gagattagac agtaagcata agcgaggcat cgagttttgg acagagattt ctgctctttc
      661 tagtctcaaa catgaaaaca tagtctctat tatcggattt tgcgatgaaa aaggggagaa
      721 ggtgatcata aacaagcatg aggccaagag aagtctcgtg atgtatctaa gcaatccaac
      781 cctctcatgg gttcaaagat tgaagatttg tgttggagtt gcgcgtgcat taagttacat
      841 ccattatgaa aatggacgga gttactcggt gatacatcgt aacatcaaca gctctacaat
      901 acttttagat aataaatttg agccaaagtt atctggtttt gaatattcca tcaaccattc
      961 ggtacaacga atggatcagg ttctcttctc agaagccatt ggaacgacag gatatatcga
     1021 tccgtcaatt caaaagacca gaggtgtgac ctacaagtca gacgtctact catttggtgt
     1081 tgttttatgg gaagtattat gcggtaggaa agcgttcatt acaaatggga atgataagtt
     1141 tctagctcca gtagccagat ttcactatga agacaataca gtaaatgcta taatgctaac
     1201 ttggctgcta cagaaccgat tgtccctgga ctcagtccag accttcacat cagtagctta
     1261 ttcctgctta aacgatgaga gagtacttcg cccggatatg acccatgtta tctacgaact
     1321 tgagaaagca ttagaatttc agctgccata tgaaatctat attagaaaca ccttggaaca
     1381 cgtaaaattc caagtgagtg acttgaagat tagacttgct gacataatgt tggccacaga
     1441 taacttttct gaagcatacc acatcggggg taccatatac tacgacttgt acaaatcaga
     1501 acttgagctt ttcgataaag aaaatgttgc cactttagaa gagaagaata gtagtgaact
     1561 atccaagaca cgtgtcactg tagttataaa acgtgtcttc cctagaaaag acattcgagg
     1621 agacgtattt gctacagaac tggaaatgct taaaatttgt aatcattgca acatagtcac
     1681 cttacttgga gtttgtgatg aaggttctga gacgattctc gtttttgagc atgcttctaa
     1741 tgggtatctt cgtgaatatt tgtttaatat aaaaaacagg cctattctta cttgggcaca
     1801 acgtttgaaa atatgccttg atgtttcaca tgctataaat tatctacact atgaggtgga
     1861 aaatcaaaag gcgattataa actgtgatat aaggagcgcc acaattgttt tagatgagaa
     1921 ttggggtgca aagattgctg actttggttt ctctgtattc cttcctccaa atttagatgc
     1981 tctcgaactc aattgtatcc ttggctatga ttgttctgtc gatccagaat ttgaggagac
     2041 gggcaagtta acacgagaat cggatgtata tggttttgga gtagttttgt ttgaaatttt
     2101 atgtgggagg atagccaatg atgatgcttt tactaaggag agtgacagag gactggcatt
     2161 tgttgtacgg cgatgcttcc atgatggtac actaaaggaa atgatagatc ctataattaa
     2221 taatgagtgt aaaaaagatt ctttagacat attcataaaa attgcatatc agtgtctctc
     2281 aaaaactcaa gaccaacgtc caacaatcaa agtcgtcatt aaagagctag agagagcatt
     2341 atctttgcaa gaggatcaag tacaatgcca agagatcgac aaagttgttg aagaattttg
     2401 gaaatcggta gaaccgacaa atgaaaatct tatgttaaag aaagatgcag ttgtacgtta
     2461 ttcttgggat aacagtaagg atcttcccta tgcataccta aatattcgac ggagtgatat
     2521 acttttggcc accgattact tttctaaggc atgcattatt gggaatgatg gattatatga
     2581 cttgtacaaa gcagaacttt tggtttttga tcaagaaata ttcgccttag cagaagagaa
     2641 aaataaaggt gaagtaccaa agagactcac tactgtatgt ttgaaatgct tccacaaaag
     2701 agatgagaat acagaatttc tatttcgtca cagttttatg atgtatctaa gttgtaataa
     2761 gcatcgcaac atagggaatc tacttggatt gtgtgatgaa ggttctgaaa tgatcctcgt
     2821 tttggagtat ccttctaatg gttttcttta cgattatttg aaaaaaatca aagacaaccc
     2881 tattcttact tgggcacaac gtttgagaat atgtcttgat gttgcatatg gattaaagta
     2941 cctacactat gaaatcggag accaaaaggc gataatacac cgtgaattaa ggagtagttg
     3001 cattgggttg gatgaaaatt ggggggcgaa gattcttgac catggtttca cgagattcag
     3061 tccgaatgaa gatggtgatg ctctacattt taaatttaag tatcatttaa gtcctactag
     3121 ttacagggat ccagaattta ctaggacggg tacgttgaaa agagaatcag atgtatacag
     3181 tttaggagta attatgtttg aaattttgtg tgggaggaca gccgataatc gcattttcaa
     3241 aaaggggagt gacactgggc tggcatctgt ggcaaggaga tgcttccatg atggaacaat
     3301 gcaagaaatc attgatccta tacttaagaa tggaatcggt gagaacaatt tttccctaaa
     3361 taaaggaccc aacaaaaagt ctctcaatgc atttctggaa attgcataca agtgtttagg
     3421 ggaaactcaa gatcaacgtc caacatcaat aggtgttgta gaggagctcg agaaagcctt
     3481 atattttcaa gaaaacaacg atgacggcga cctccggatt acacttgaag atataaagtt
     3541 ggccactaaa aacttccatg ttagcaattg tgttggtgga ggaggatttg gaaatgttta
     3601 taaaggaaaa cttccactaa gtgatgatac aattgttgca aagaaattgg atacaagaag
     3661 tcgtcaaggg gaacaacaat ttcgcaatga gctccaaatt ctttttgagt ataagcacga
     3721 aaatatcatc agtcttgtag gctattgtga tcaagaagat gcaaaaatca ttgtttatgc
     3781 gtatgcacct agaggaagtc ttgatagata tttgagcgat ggtcgtctag attggataaa
     3841 aagacttaac atatgtattg atgttgcaac cgcattgaat tttcttcata gaggaatcgg
     3901 aaaacaagca acagtgatac atagggacat caaaactgct aatgttctac taacgagtga
     3961 ctggaaagca aaacttgccg attttgggct ttccttgata agtgcaatac ataacgaaac
     4021 tgattacgtt atcaatcgtg cgtgtggcac accgggctac gtggatccac tttacttaaa
     4081 atcaggattc ttaaccaaag aatcggatat atattcattt ggtgttgttt tatttgagat
     4141 gttgtgtgga agatcaacgt ttgagaccca caaacgggaa ggtatgtata taccaagttt
     4201 cattaaacac aactttgaaa atgaaaaacg tgaggaggtg gtgtttgaga aaataaaagc
     4261 acagatcatg ccgaaagcat tgactgcatt ccgaaaagtt gcgtaccggt gcttacgtga
     4321 tgatagagaa agacgaccaa aagcaaaaga agttgtaaaa caacttaaga aggcattgag
     4381 atttcaaatg ctgacagatg atttagcttc taccacaagt agctagtatc aactgcaaga
     4441 ttggaattca aaagtttgtt ttcaagcctt tttaaagaat ctagtggttc ctgttgtcag
     4501 ggacttagtg gaaggtgctc ttaatgatgg caatagttgg agaatctatg gtcagaagga
     4561 gatcttagat tctaatcatc catgtgggaa gaaaaccgac caaggatcca taaacaatac
     4621 atgtaattga gaaaagcaat caacttagcg aagggttgga ccatgttatt cttacaagta
     4681 gttcataagc tcattgaagc tgcttttgcg gaagagtttc aacgaacgct tcatcaatcg
     4741 gcctaaaagg aaaaaacgtg caacacttaa ctaacagtta ttttacaaat tgcggaggac
     4801 aaaaaagata tgatgacgga tatatttgaa ccgggttgag caacaacaga aaaacgcttc
     4861 attcaaggtt ataacaaaca ctagctctat ttcaattgta gcagtggggc tgacctatgc
     4921 caattcaggt ttagagcctg aaggaacaga cacaaaccaa atgaagaaga aaagggaata
     4981 gcacatcaac agcaccatat tttgatagca acagctttgg acaataacag cttttgaaaa
     5041 ctcaagattc ctcaatcaga aaaccaatct catccctggt atatcaacaa ctcatatatt
     5101 agaaattgta agataaatgg tatatacatc tcataaatgt tcaaatataa aaagcttcaa
     5161 cagctttgga aatattagtt ttaacaatgc gttacatatt aatat
//
LOCUS       XM_071885913            1022 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NADPH-dependent aldehyde
            reductase 1, chloroplastic-like (LOC139903979), mRNA.
ACCESSION   XM_071885913
VERSION     XM_071885913.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1022
                     /gene="LOC139903979"
                     /note="NADPH-dependent aldehyde reductase 1,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 23 Proteins"
                     /db_xref="GeneID:139903979"
     CDS             1..870
                     /gene="LOC139903979"
                     /codon_start=1
                     /product="NADPH-dependent aldehyde reductase 1,
                     chloroplastic-like"
                     /protein_id="XP_071742014.1"
                     /db_xref="GeneID:139903979"
                     /translation="MAQQFPPQRQERQPGKEHVMDPTPQFINPNYKPADKLRGKVALV
                     TGGDSGIGRAVCYCYAKEGATIAFTYVKGQEDKDAADTLKMIKQAKVKDSQDPIAIPT
                     DLGYDNNCKSVVDEVVGRYGRIDILINNAAEQYQSRSVEEIDENWLDRVFRTNIYSHF
                     FLTRHALKHMKEGSSIICTTSVNAYKGNTTLLDYTSTKGAIVSFIRALALQLAPKNIR
                     VNGIAPGPVWTPLIPASFQEEKTSKFGSECPMNRAGQPCEIAPSFVFLACEDSSYYTG
                     QVLHPNGGMIVNA"
     misc_feature    40..864
                     /gene="LOC139903979"
                     /note="classical (c) SDR, subgroup 1; Region: SDR_c1;
                     cd05355"
                     /db_xref="CDD:187613"
     misc_feature    order(40..42,136..138,142..153,208..213,217..219,304..312,
                     388..399,460..462,475..477,535..543,580..582,592..594,
                     670..681,685..696,730..732)
                     /gene="LOC139903979"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:187613"
     misc_feature    order(142..147,217..219)
                     /gene="LOC139903979"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:187613"
     misc_feature    order(463..465,541..543,580..582,592..594)
                     /gene="LOC139903979"
                     /note="active site"
                     /db_xref="CDD:187613"
ORIGIN      
        1 atggcacaac agtttccacc acagagacaa gaaaggcaac caggaaaaga acatgtcatg
       61 gatccaaccc cacagtttat caaccctaat tacaaacctg ccgataaact cagaggtaaa
      121 gtggccttag tgaccggagg agattcgggc atagggcggg cagtttgcta ctgctatgct
      181 aaagaaggag caactattgc tttcacttat gttaagggtc aagaagacaa agatgcagca
      241 gatactttga agatgattaa acaagctaaa gtgaaagact cacaagatcc aattgcaata
      301 ccaactgatt tagggtatga taacaactgt aaatcggtgg ttgatgaagt cgttggacgg
      361 tacggacgta tcgatatctt gatcaacaat gcagccgagc agtaccaatc tcgttccgtt
      421 gaagaaatcg atgaaaattg gcttgatcgg gtgtttagga ccaatattta ctcccacttt
      481 ttcttgacta ggcatgcatt gaagcacatg aaagaaggaa gcagcataat ttgtacaaca
      541 tcagtgaatg cctataaagg taatacaacg ttgttggatt acacttcaac aaagggagca
      601 attgtgtctt tcattagagc tctagcattg caattagcac ccaaaaatat tcgggtaaat
      661 ggaatagcac ctgggccggt gtggaccccg ctgattccag catcttttca agaggagaag
      721 acgtccaagt tcgggtcaga gtgcccgatg aatcgagcag ggcagccgtg tgaaatcgcg
      781 ccatcgtttg tgtttctggc ttgtgaggac tcctcttact atacaggcca agtcctacac
      841 cctaatggtg gaatgattgt gaatgcttga agatggcagc aaagatctaa aaaagtggtt
      901 agcaagtttt gaggactggt agctaatgaa gatgaaagtg gtgtaccaac tgttttcaag
      961 tatgaaggat aataatatat atagtatatg atgtaatctg tgtacataat gtatgaataa
     1021 at
//
LOCUS       XM_071885914            2540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein BLISTER-like
            (LOC139903980), mRNA.
ACCESSION   XM_071885914
VERSION     XM_071885914.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2540
                     /gene="LOC139903980"
                     /note="protein BLISTER-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139903980"
     CDS             181..2265
                     /gene="LOC139903980"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1255..1257,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: protein BLISTER-like"
                     /protein_id="XP_071742015.1"
                     /db_xref="GeneID:139903980"
                     /translation="MTSDQILPNSTVSSKKQQHLEAGKKRLEEFRKKKAAAKNIASSN
                     SVHTANGDVHEAKSLVSETILAPDVTSDSGSQAGNNEKKTIDVHEDEPYMNHIINSFN
                     KPSATLGQTYSTAGKLDFEKSKVLDNPEENVDNYSNHFSRTKLKHAPKSSNSNEDHLK
                     DYSYSYSYPKPVTTQVSVTKSSPERSLGTSNSNNLSHHDQPANGPTYRDSSSESEARK
                     SIQGMLANRYPPISENNMNHFSNPSDESSLSLWTHESVSTSFRSEAIPSNSQTSMSPD
                     VETDKSNHFSSKVYPVDAPVSSCNTQSFTNSSVANVPDPFSQGRNELDIDRMSDYKST
                     KQNEDFAALEQHIEDLTQEKFSLLXALEASRVLAESLATENSALTDTYNQQGGVVNQL
                     KADMERLQEEIKAQLVELEAMRTEYGNAQLECSAADERAKLLASEVIGLEDKALRLRS
                     NELKLERQMESLEAEMSSQKRRVSSLEKERQDLQSTIEALQEEKKLLQSKLRKAPAIG
                     NSVDSKKSSTTRKEASTFTGDLVDESEDALPGTANLQATIGESDAFGSVSRDFGVDIT
                     FSNIPQDQMRTIHSISTLISELSLEKEELTQALSTEFSLSSKLKDLNRELSQKLEVQT
                     QGLELLISQSMANDNNNNNNNNIPQRNSPPRPVIDNTPYADEGDEVVERVLGWIMKLF
                     PGGPSKRQTKHL"
     misc_feature    1345..>2070
                     /gene="LOC139903980"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]; Region: COG4372"
                     /db_xref="CDD:443500"
     misc_feature    1348..>1692
                     /gene="LOC139903980"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; Region: DR0291; COG1579"
                     /db_xref="CDD:441187"
ORIGIN      
        1 gggagagatc taaaaaatat acccaaaaag ttatacacac cggctctccc ctccgatcta
       61 atcgggtcct gctatttcaa ttagggttta tgtttctttt attgatatta ctttgtatgt
      121 atatgtatat ataaatccct aattaggtcg gttcttgttg tattgttgtt atcaattaaa
      181 atgacttccg atcagatatt gcctaattcc accgtttcat ctaaaaagca acaacatttg
      241 gaagctggaa agaagcggct ggaggagttt cgtaagaaga aagcagcagc caaaaatatt
      301 gcatcaagta attctgtcca cactgctaac ggagatgtac acgaggcgaa atctttagtt
      361 tctgagacta ttctggcacc agatgtcaca tcagattcag gttctcaagc tggaaataat
      421 gaaaagaaaa caatagatgt tcatgaagat gagccctata tgaatcatat tataaacagt
      481 ttcaataaac cttctgcaac tttagggcag acatattcaa ctgctggaaa gttggacttt
      541 gaaaagagta aagtgcttga taatcctgaa gagaatgttg ataactattc caatcatttt
      601 agtaggacga agctgaaaca tgcccctaaa agtagtaata gtaacgaaga tcatttaaag
      661 gattatagct atagctatag ctatccaaaa cctgttacca ctcaagtttc agttactaag
      721 tcttctcctg agagatctct tggtacttca aattctaaca acttaagtca ccatgatcaa
      781 ccagcaaatg gcccaacata cagagattct tcctctgaat ctgaagctag gaaatctata
      841 caaggtatgt tggcgaatcg ttatcctcca atatctgaga acaacatgaa ccatttcagt
      901 aacccaagcg atgaaagtag cttgtcttta tggacacatg agtctgtatc aacaagcttc
      961 agatctgaag ctataccatc gaacagtcag acgtccatgt caccagatgt agaaacagat
     1021 aaatctaatc atttcagttc aaaagtttac cctgtggatg ctcctgtttc atcatgtaat
     1081 acccaaagtt ttacgaactc ttcggtagct aatgtccctg acccatttag tcagggtagg
     1141 aatgaacttg acatcgatag gatgagcgat tataagtcta ctaaacagaa tgaagatttt
     1201 gctgctttag aacagcatat tgaagacctg acacaagaaa agttctcttt gctatgagct
     1261 ttggaggctt ctcgagttct tgcagagtct ttagctaccg agaactcagc actcaccgat
     1321 acatataacc aacagggagg tgttgtaaac caattaaagg ctgatatgga gagattgcag
     1381 gaagaaatta aggctcagtt ggtggaactt gaggctatga ggaccgagta tgggaatgct
     1441 cagttagaat gtagtgcagc tgatgaacgt gccaagttgt tagcgtctga agttattggt
     1501 ttagaagata aggcactcag acttaggtct aacgagctga aactggagag acaaatggag
     1561 agcttagagg ctgaaatgtc ctcacagaag agaagagtat ctagcctgga aaaagagcgc
     1621 caagatctac agtccactat cgaagcttta caggaagaga aaaaattatt gcaatccaag
     1681 ttgcgaaagg cacctgcaat tgggaattcg gtggattcta agaagagttc taccactaga
     1741 aaggaagcat caacttttac aggcgacctt gtagatgaaa gtgaagatgc gttacctggt
     1801 accgcgaacc tacaagctac tattggtgaa agtgatgcct ttggttcagt aagtagggat
     1861 tttggtgttg acattacatt ttcaaatata ccgcaagatc agatgagaac gatccatagt
     1921 attagcacat taatctccga gttgtcattg gaaaaagaag agttgacaca agcgttgtca
     1981 actgaatttt ccttaagttc caagttgaag gatttgaata gagaattatc acagaaactt
     2041 gaagttcaaa cacaaggatt agagttgtta atttctcaga gtatggcgaa tgataataat
     2101 aataataata ataataatat accgcaaagg aattctcctc ctcgtcctgt cattgacaac
     2161 actccgtacg ctgatgaagg tgacgaggtg gtggaaagag ttttaggatg gataatgaag
     2221 ctttttcctg gagggccatc aaagcgacaa actaagcatc tttgagtctc gacaactcaa
     2281 agatgtggtc actatagttt tgacatgtga cggtcaacaa ctgttttccg ttggtgataa
     2341 tcattggaga tgcatcttca tctccttggg aaatattgac aaaatacagt gttttcatgt
     2401 agctgtggat agatgttgga atgcaaagaa agtattctgg cacctaaaga tgattgtaaa
     2461 gtaatttttc tttaacaaat atattgtttt ttttaagaat taaatttgtt ttctttgttg
     2521 gtttacacag caaaggtaat
//
LOCUS       XM_071885915            1573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent
            (S)-NAD(P)H-hydrate dehydratase (LOC139903981), mRNA.
ACCESSION   XM_071885915
VERSION     XM_071885915.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1573
                     /gene="LOC139903981"
                     /note="ATP-dependent (S)-NAD(P)H-hydrate dehydratase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139903981"
     CDS             119..1222
                     /gene="LOC139903981"
                     /codon_start=1
                     /product="ATP-dependent (S)-NAD(P)H-hydrate dehydratase"
                     /protein_id="XP_071742016.1"
                     /db_xref="GeneID:139903981"
                     /translation="MQQCYGSIIRRQQHLLRCLIGDCRISSNDTVLSVNNISKENTRM
                     QSVMSSGNPNLEIDAISVLRSISPNLDSNKHKGQAGKIAVVGGCREYTGAPYFSAISA
                     LKIGADLSHVICTKDAAPVIKSYSPELIVHPLLEESYNVRDEDRKSISTRVLAEVDKW
                     MERFDCLVIGPGLGRDPFLLDCVSDIMKHARESNVPMVIDGDGLFLVTNCLDLVSGYP
                     LAVLTPNVNEYKRLVQKVLNCEVNDRDGPQQLLSLAKSIGGVTILRKGQTDYISDGEG
                     VEAVSIYGSPRRCGGQGDILSGSVAVFLAWARKRIGEVDPGINPVMLGCIAGSALMRK
                     AASVAFADKKRSTLTTDIIECLGRSLEEICPVS"
     misc_feature    335..1180
                     /gene="LOC139903981"
                     /note="B.subtilis YXKO protein of unknown function and
                     related proteins. Based on the conservation of the ATP
                     binding site, the substrate binding site and the
                     Mg2+binding site and structural homology this group is a
                     member of the ribokinase-like superfamily; Region:
                     YXKO-related; cd01171"
                     /db_xref="CDD:238576"
     misc_feature    order(407..409,989..991,998..1000)
                     /gene="LOC139903981"
                     /note="putative substrate binding site [chemical binding];
                     other site"
                     /db_xref="CDD:238576"
     misc_feature    order(791..793,911..913,992..997,1004..1006,1115..1117)
                     /gene="LOC139903981"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238576"
ORIGIN      
        1 aatcaccaat tttcagtttg ttgtaagttc ccattttcat agccctaatt tccataccag
       61 ttatatttct acttcagaca attaaagatc atacatgtgt agttaaagac atagatatat
      121 gcagcagtgt tatgggagta taattagaag acaacagcac ttacttaggt gtttgattgg
      181 agattgccgt atcagcagca acgacaccgt tttgtccgtg aataacatta gtaaggagaa
      241 cacaagaatg caatctgtaa tgagtagcgg taaccctaat ttagaaattg atgctatcag
      301 tgttttgagg tcaatttccc ctaatcttga ttcaaataaa cataaaggcc aagcaggaaa
      361 gatagcggtt gtaggtggtt gtcgtgaata cactggtgca ccgtacttct cggctatttc
      421 agctcttaaa attggtgcag acttatcaca cgtgatctgt actaaagatg ctgctccagt
      481 tattaaaagc tacagccctg agttaatcgt gcatcctttg ctagaggaat catacaatgt
      541 gagggatgaa gacagaaaat caatctcaac ccgggttctt gctgaagttg acaagtggat
      601 ggaaagattc gattgtcttg tcatcggccc tggacttgga agagatccgt ttcttctgga
      661 ttgcgttagt gatattatga agcatgcacg ggaaagcaat gtaccgatgg tcattgacgg
      721 ggatggacta tttcttgtca cgaactgtct cgatctagtg agcggctatc cgttagctgt
      781 tctgactcca aatgtaaatg aatataaacg tcttgttcag aaagtattaa actgtgaagt
      841 aaatgatcga gatggacccc agcaactact gtctcttgca aagagtattg gtggtgtgac
      901 tattctccgt aaaggacaaa ctgattacat tagtgatggc gaaggagttg aagcagttag
      961 catatatggt tcccctagac gttgtggcgg acaaggtgat atactatctg gaagtgttgc
     1021 agtattctta gcttgggctc gaaagcgtat tggtgaagtt gaccccggta tcaacccggt
     1081 tatgttgggg tgtattgcag gatctgcgct gatgagaaag gcagcatcag ttgcatttgc
     1141 agataagaag agatcaaccc tcaccaccga tattatagaa tgcttgggaa gaagtttgga
     1201 agaaatatgt ccagtttctt agagctatgc tatgagtatg gctcacttca ctgtcatgtt
     1261 ggcctgtctt ctttcgttat caggttaatt gagggcgctt agtgttagaa agataataat
     1321 atcctttagt gtgaaataaa gatgagtacc aaagttttga tactttgttg catataaatg
     1381 gattcttaag gaatatggtt taagattaga tatgaggaat ccagctcctc aaggtatata
     1441 tatgtgcacc gtactgtatt atacttgcaa aaaaaaatac atagcataaa aaaaaacata
     1501 caaaaaaaaa accttggcga atgttaaaaa taaaaaaaac aaccgttttg cagtgtttaa
     1561 caaggtatat cca
//
LOCUS       XM_071885916            1054 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin domain-containing
            protein DSK2b-like (LOC139903982), mRNA.
ACCESSION   XM_071885916
VERSION     XM_071885916.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1054
                     /gene="LOC139903982"
                     /note="ubiquitin domain-containing protein DSK2b-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139903982"
     CDS             163..813
                     /gene="LOC139903982"
                     /codon_start=1
                     /product="ubiquitin domain-containing protein DSK2b-like"
                     /protein_id="XP_071742017.1"
                     /db_xref="GeneID:139903982"
                     /translation="MTNGVDSSNSDTRESVTINVRCCSNSMMPNFSVQVSLEASVETF
                     KSLIEQKSDIPAGQQQLMYKRRVLEDGQTLKSYGLKAEHTVHMVYGSLEGEGEGEGEG
                     PSPIPQLNFMNQVYLDMRRQLTLNPKMMKAIMDLPDVQNEMAGNPQFMELQQQTQNPD
                     KMQQVLDLPVVMNILLCCQPDVLMKTLRDTYPHITDDDVYVEVDDDYHYEYEYEYE"
     misc_feature    208..435
                     /gene="LOC139903982"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
ORIGIN      
        1 tatacttgcg ccccaagttg ggctccttcc ccaagtcata attaaaccct tacgtaccat
       61 ttatatttta tatttatata tctcctaatt cctgttcatc ctacgatttc aattttaaac
      121 ttcttccacc gatcaatcaa tttagctcga atctcacaca tcatgaccaa cggtgttgat
      181 tccagcaact ctgatacccg tgaatccgtc actattaacg tacggtgttg ttctaacagc
      241 atgatgccga atttctccgt tcaagttagc ctcgaggcgt ctgtcgagac gtttaagtct
      301 cttatcgaac agaagtctga tattccggcc ggacaacaac aattgatgta taagagacgt
      361 gttttagaag acggtcagac tcttaagagc tatggcttga aggccgagca cactgttcac
      421 atggtttatg gttcgcttga aggagaagga gaaggagaag gagaaggccc atcaccaatt
      481 cctcaactta attttatgaa tcaagtttac ttggacatgc ggcgtcagtt gactctcaat
      541 cctaaaatga tgaaagcaat catggatttg cctgatgtcc agaacgaaat ggcggggaat
      601 ccccaattta tggagttgca gcaacagact caaaatcctg acaagatgca acaagtcttg
      661 gatctgcctg ttgtcatgaa tatattatta tgctgtcaac cagatgtttt gatgaagacg
      721 ttgcgggata cttaccctca tatcactgat gatgatgttt atgttgaggt tgatgatgat
      781 taccattatg aatatgagta cgagtatgaa tgatgattat gagtatgatg atgatgagta
      841 tgatgatgag gaagagacat agtgatatgt atcagctagg aatggagaat ctaccaaatt
      901 tagaagaaag atgaaaggaa atcagatgat gcatttaggc aggcatttat tcactacgtt
      961 tattcattat tgttatgtta aatctccata acattcatat tttattatgc tgcactttta
     1021 ttaatatgta aatttgctca aattgccacc tcta
//
LOCUS       XM_071885917             713 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903983), mRNA.
ACCESSION   XM_071885917
VERSION     XM_071885917.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..713
                     /gene="LOC139903983"
                     /note="uncharacterized LOC139903983; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139903983"
     CDS             52..576
                     /gene="LOC139903983"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742018.1"
                     /db_xref="GeneID:139903983"
                     /translation="MAAKMIIVRLVLSILALSMIEFSSCHLLKSSVACLDCLTRSNLA
                     GIKILIKCNQVKNIAMATTNEHGTFERQLPSSNCQAKILGGPKQLYISKKNMITSIKK
                     VEKTSSYTTSQPLSFYTSCPLSQDNDGKCGTQNDAVGMNIGSSKTVDIPLPKEWGLAP
                     SSYYVPFMPIIGIP"
ORIGIN      
        1 caaactatta tttggctttg tataagctat ttttttgtta tttatttagt tatggctgca
       61 aagatgatca tagtaagact agtattgtcc atattagctc tttcaatgat cgagttctca
      121 tcatgccatc tcttgaaaag ctcggtcgct tgtctcgact gcctaactcg ttccaacctc
      181 gcaggcataa agatactaat caagtgcaat caagtgaaaa acatagccat ggctacaacc
      241 aatgaacatg gtacttttga gagacaactt ccatcaagca attgtcaagc caagatcttg
      301 ggtggaccca aacaactata tatctcaaaa aagaacatga tcactagcat caagaaggtt
      361 gaaaagacta gctcttacac cacatctcaa ccattgagct tctacacatc atgccctttg
      421 tcacaagata atgatgggaa atgtgggacc caaaacgacg cagttggaat gaacattgga
      481 tcgtcaaaaa ccgttgatat tcctttgcca aaagaatggg gattggcacc ttctagctat
      541 tacgttccct tcatgcctat aatcggcatt ccgtgattta atctagagtt tgtaacttat
      601 gttttatatt attgcaagtg tgtgtatgtt ccataaacta cctcaatgtt gtctaatgtg
      661 aaacaaacaa ttagtgagat atgtacgtta tgaatgcttg tacttatgca att
//
LOCUS       XR_011778610             282 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903985), transcript variant X1, ncRNA.
ACCESSION   XR_011778610
VERSION     XR_011778610.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..282
                     /gene="LOC139903985"
                     /note="uncharacterized LOC139903985; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903985"
     ncRNA           1..282
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903985"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139903985"
ORIGIN      
        1 attggtttca ttatacgctt tttcaaaatc aaaataaccc tagaaagctg cttcttcttc
       61 ttttctgctt agggtttttt tccagcttta cacatatact gacaatcatc agcagcttct
      121 tcctttcaga gccgagttgc acacatcaag ctaatgtcga tcgactttct atgccttcgg
      181 ttgaatccgt ggagagtgga gttgggtacc cgaagtgaaa aagggaaccg gtaataaaga
      241 atggaattgt ttgctccaag ttgtatgaat atggtttact gc
//
LOCUS       XR_011778611             325 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903985), transcript variant X2, ncRNA.
ACCESSION   XR_011778611
VERSION     XR_011778611.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..325
                     /gene="LOC139903985"
                     /note="uncharacterized LOC139903985; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903985"
     ncRNA           1..325
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903985"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139903985"
ORIGIN      
        1 tttttttcca gctttacaca tatactgaca atcatcagca gcttcttcct ttcagttcta
       61 aatcgacatg tttaattaac tatttatcaa gtattgattc aagatcattt cttgtggtaa
      121 tacaagtacc aaagatattg tcgatcttga tgatattaat gcttcttcac agagccgagt
      181 tgcacacatc aagctaatgt cgatcgactt tctatgcctt cggttgaatc cgtggagagt
      241 ggagttgggt acccgaagtg aaaaagggaa ccggtaataa agaatggaat tgtttgctcc
      301 aagttgtatg aatatggttt actgc
//
LOCUS       XR_011778612             558 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903986), ncRNA.
ACCESSION   XR_011778612
VERSION     XR_011778612.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..558
                     /gene="LOC139903986"
                     /note="uncharacterized LOC139903986; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903986"
     ncRNA           1..558
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903986"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139903986"
ORIGIN      
        1 ttataaggac cagcatgttc tatcgggtgt tcttttaatg gatacgaccg agagaatcga
       61 ggaatcgaca atatatctag attcaaatcg actgcttgga ctaatcaaat atggactttt
      121 ataatggcgc ttttaatgga tatgaccgag atcactttgt tcaaatcgac tacttggact
      181 gtatgatata atggtgctat gaatgatgaa aaactattgc ttaaatatgt gtgtcctact
      241 tgctttaacg accaaaacta catacgtcaa ttcaaagatt gaggctatgg tactttttgg
      301 actcgagcat tggggcttag acacataagg tgaaattagc tatcaaaact gcagccaaaa
      361 ctgaagaaac agcgagaaaa tgattatcta taatggcgag ggactgcaag cgtttctgta
      421 aattcatgga aaattgctac ttcatcacat taactatgat caaaggggat tgatatctac
      481 acaactcatt ttttatatgt atacaaccaa tatgcaatga gtgtcgcatt atagtttatt
      541 catttgtagc gttacgga
//
LOCUS       XM_071885918            1244 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear transcription factor
            Y subunit C-3-like (LOC139903987), transcript variant X1, mRNA.
ACCESSION   XM_071885918
VERSION     XM_071885918.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1244
                     /gene="LOC139903987"
                     /note="nuclear transcription factor Y subunit C-3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 Proteins"
                     /db_xref="GeneID:139903987"
     CDS             217..993
                     /gene="LOC139903987"
                     /codon_start=1
                     /product="nuclear transcription factor Y subunit C-3-like"
                     /protein_id="XP_071742019.1"
                     /db_xref="GeneID:139903987"
                     /translation="MDQQQAQGMGAIGSSAQMPYSMAPYPPNQMMGIVPPASVGGSVP
                     PSQTSGLQSPPAQLAQQQLAYQHIHQQQQQQLHQQLQNFWANQYQEIEQTTDFKNHSL
                     PLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDI
                     AAAITRTDIFDFLVDIVPREDLKDEILASTMPRGGPVPVGAPTEGLPYYYMPPPQVGA
                     SGMYMGKPVDPQALYGQQPRPYMTQPMWTQQQQQEPQEDA"
     misc_feature    499..750
                     /gene="LOC139903987"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit gamma (NF-YC) and similar proteins;
                     Region: HFD_NFYC-like; cd22908"
                     /db_xref="CDD:467033"
     misc_feature    order(520..525,532..537,544..549,553..558,565..567,
                     571..579,583..588,592..600,604..627,631..639,646..648,
                     673..687,694..696,721..723,730..735,742..747)
                     /gene="LOC139903987"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467033"
     misc_feature    order(520..534,538..540,550..552,571..582,670..678,
                     682..684)
                     /gene="LOC139903987"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467033"
     misc_feature    order(553..555,559..561,718..723,727..732,739..744)
                     /gene="LOC139903987"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:467033"
     polyA_site      1244
                     /gene="LOC139903987"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcgctctat atatatcgtc acagaccaca tttaggtatc tgcgtcgtta ttgtcacttc
       61 cctttctctc gaccaaccta cctgtctcac tgccaaaccc tagctctact aatatcagac
      121 tacagatata aaattctgct tgattagctt tcgtgcgtcg atcgaagtcg tttcaagtta
      181 gcaaagagct ttcgaggtgt gaacacagtt gtgaagatgg atcagcaaca agctcaaggt
      241 atgggagcta tcggaagctc tgctcagatg ccttacagta tggcaccgta tccaccaaat
      301 cagatgatgg gtatcgtacc ccctgcatca gttggaggtt cggtcccacc ttcacaaaca
      361 tctggtcttc aatcaccgcc agctcaactc gctcaacaac agcttgctta tcagcacatc
      421 catcagcaac aacagcagca attgcatcag cagctccaaa atttctgggc aaaccaatat
      481 caagaaattg agcaaactac tgatttcaag aaccatagtc taccattagc taggatcaaa
      541 aaaatcatga aagcagatga agatgtgaga atgatatcag ctgaagcacc agtgattttc
      601 gctcgtgcat gtgaaatgtt catccttgag ttgactttaa ggtcttggaa tcatactgaa
      661 gagaacaaaa ggaggaccct tcagaaaaac gacatcgctg ctgcaatcac taggactgat
      721 atatttgact ttttagttga tatagtaccg cgagaggatt tgaaagatga aatacttgct
      781 tctacaatgc cgagaggtgg gcccgttcct gttggagctc caactgaggg tctaccgtat
      841 tactatatgc cgccgccaca agttggtgct tctgggatgt acatgggtaa gcccgtggat
      901 cctcaagctc tatacgggca gcagcctcgt ccgtacatga ctcagcctat gtggacacag
      961 cagcaacaac aagaaccaca agaagatgct taagcaggat acttgcaaga gatcgaaatt
     1021 tgaacatggt ggctgtagaa gaacactcac taatgggcat ttgtattaaa gttcagtttt
     1081 atttatgcgg ttatttagga aatgcttgta gtctcactta actatgtctg tgtctctact
     1141 tgtctcggac aatatgttgt tttatgaccg ttggtggcta acgtgtgtaa tatctggaat
     1201 cggttttcaa aaatattagc ttaactgatc cattacgaat ggta
//
LOCUS       XM_071885919            1232 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear transcription factor
            Y subunit C-3-like (LOC139903987), transcript variant X2, mRNA.
ACCESSION   XM_071885919
VERSION     XM_071885919.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1232
                     /gene="LOC139903987"
                     /note="nuclear transcription factor Y subunit C-3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 Proteins"
                     /db_xref="GeneID:139903987"
     CDS             205..981
                     /gene="LOC139903987"
                     /codon_start=1
                     /product="nuclear transcription factor Y subunit C-3-like"
                     /protein_id="XP_071742020.1"
                     /db_xref="GeneID:139903987"
                     /translation="MDQQQAQGMGAIGSSAQMPYSMAPYPPNQMMGIVPPASVGGSVP
                     PSQTSGLQSPPAQLAQQQLAYQHIHQQQQQQLHQQLQNFWANQYQEIEQTTDFKNHSL
                     PLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDI
                     AAAITRTDIFDFLVDIVPREDLKDEILASTMPRGGPVPVGAPTEGLPYYYMPPPQVGA
                     SGMYMGKPVDPQALYGQQPRPYMTQPMWTQQQQQEPQEDA"
     misc_feature    487..738
                     /gene="LOC139903987"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit gamma (NF-YC) and similar proteins;
                     Region: HFD_NFYC-like; cd22908"
                     /db_xref="CDD:467033"
     misc_feature    order(508..513,520..525,532..537,541..546,553..555,
                     559..567,571..576,580..588,592..615,619..627,634..636,
                     661..675,682..684,709..711,718..723,730..735)
                     /gene="LOC139903987"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467033"
     misc_feature    order(508..522,526..528,538..540,559..570,658..666,
                     670..672)
                     /gene="LOC139903987"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467033"
     misc_feature    order(541..543,547..549,706..711,715..720,727..732)
                     /gene="LOC139903987"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:467033"
     polyA_site      1232
                     /gene="LOC139903987"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcgctctat atatatcgtc acagaccaca tttaggtatc tgcgtcgtta ttgtcacttc
       61 cctttctctc gaccaaccta cctgtctcac tgccaaaccc tagctctact aatatcagac
      121 tacagatata aaattctgct tgattagctt tcgtgcgtcg atcgaagtcg tttcaagtta
      181 gcaaagagct ttcgagttgt gaagatggat cagcaacaag ctcaaggtat gggagctatc
      241 ggaagctctg ctcagatgcc ttacagtatg gcaccgtatc caccaaatca gatgatgggt
      301 atcgtacccc ctgcatcagt tggaggttcg gtcccacctt cacaaacatc tggtcttcaa
      361 tcaccgccag ctcaactcgc tcaacaacag cttgcttatc agcacatcca tcagcaacaa
      421 cagcagcaat tgcatcagca gctccaaaat ttctgggcaa accaatatca agaaattgag
      481 caaactactg atttcaagaa ccatagtcta ccattagcta ggatcaaaaa aatcatgaaa
      541 gcagatgaag atgtgagaat gatatcagct gaagcaccag tgattttcgc tcgtgcatgt
      601 gaaatgttca tccttgagtt gactttaagg tcttggaatc atactgaaga gaacaaaagg
      661 aggacccttc agaaaaacga catcgctgct gcaatcacta ggactgatat atttgacttt
      721 ttagttgata tagtaccgcg agaggatttg aaagatgaaa tacttgcttc tacaatgccg
      781 agaggtgggc ccgttcctgt tggagctcca actgagggtc taccgtatta ctatatgccg
      841 ccgccacaag ttggtgcttc tgggatgtac atgggtaagc ccgtggatcc tcaagctcta
      901 tacgggcagc agcctcgtcc gtacatgact cagcctatgt ggacacagca gcaacaacaa
      961 gaaccacaag aagatgctta agcaggatac ttgcaagaga tcgaaatttg aacatggtgg
     1021 ctgtagaaga acactcacta atgggcattt gtattaaagt tcagttttat ttatgcggtt
     1081 atttaggaaa tgcttgtagt ctcacttaac tatgtctgtg tctctacttg tctcggacaa
     1141 tatgttgttt tatgaccgtt ggtggctaac gtgtgtaata tctggaatcg gttttcaaaa
     1201 atattagctt aactgatcca ttacgaatgg ta
//
LOCUS       XR_011778613            1279 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903988), ncRNA.
ACCESSION   XR_011778613
VERSION     XR_011778613.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1279
                     /gene="LOC139903988"
                     /note="uncharacterized LOC139903988; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903988"
     ncRNA           1..1279
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903988"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139903988"
ORIGIN      
        1 agtcacttgt ttagttgagt aattggtgca tttcttccaa ttacatactt attgactgat
       61 atttagggat ttaaaattaa ttcttcttac tttgtatgtg gaatttgtat tgatgtctca
      121 aataggtcca tgcgttgttt gattactcat attaggtcac aaataggctc gaagttagtt
      181 gtttattagc tacagagttt attgctattg gtttaagtga ttgatactac caagtaccaa
      241 gctattgatg cactaatgaa tcaaaaactt cgagcattgt gcatgaattg aactgttaac
      301 cattctcttg gtaaaaatct tacaatgtgt atatgcatct agatcattca tgttattagg
      361 acatcaaagg aaactactat ataaaggata tgccaaaatg ataattgatc tgtgttgtat
      421 gcttgtactc aatattttgg tggcctcaag taatatatat acactatata tacatatttt
      481 ttgtttcttt ctcctcaagt agtatttgta tctagtattg tatattgttt gggtgttaaa
      541 gatcataaaa cttactttaa taattttggg ttgcctttac aagttctctt ttcagttgtt
      601 tacttcttga tagccttgaa acatcaatta ttaaacagat gctagagtat catacatatg
      661 gtgtaacgat aaggatacac atctatgata cataaaatta tgacgtaatg ccgttatgga
      721 aaggtataca tccatatgca tacatgatta tatatgttcg gttatgatga ttggtatttg
      781 tgtaaaccag atatgttaat gtgatgatga tgatgatacc aacaggaagg atagttgatt
      841 ttagcaatgt tgatcaagca gttgatcaat atcatagatt caagctgcgg taaccaatgt
      901 ttctgttgct tctgtcggga gctcttctgc aagcgctgtt cgagtttgta caaacagaga
      961 acggaacaac caatagttgt aagatcttag tccgaatcac aagtaaaaac gatagaagtg
     1021 aaggggtatc aacgctggac cacctttacc acggagatca tcacgtacta cacactgttg
     1081 tcgactcctg gaatgcacaa gaacccaaac gtacccattc aacgcaaggg ccatactgat
     1141 acttgtttcg tctattagta aagtagatgt taatagactt gtaacatgta tttaaatctt
     1201 aactttgcat tgtaataata ttttctttaa agaatgtcac ccatgttttt gttacaatat
     1261 aataaaacgt attgtctag
//
LOCUS       XR_011778614            1147 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903989), ncRNA.
ACCESSION   XR_011778614
VERSION     XR_011778614.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1147
                     /gene="LOC139903989"
                     /note="uncharacterized LOC139903989; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903989"
     ncRNA           1..1147
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903989"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139903989"
ORIGIN      
        1 aacgcttcca ttcgttgagc accggtatca tctggatgat tctggcgatc ctctaacctt
       61 cttcatcacc atcgtaactg cctcctgcgt accctatgag ttttctcctt ccaacgacca
      121 ggtgatgcat gtttctgtct tctgcttccc ctacatctct gtcacaaacg attttcgttt
      181 tccgtctcac ctatttctcc ggcaccgttg atttatgctc ttaaactgaa aagttcggga
      241 tttccctttg tttgttgtga ttgatgtaca caattatttt tttaatcatc tgattaatta
      301 gggttcgaat aatctgatgt acccttattc caacggtcgg gaaaagaaat aattgctatt
      361 aaactgcaat caacttcgtt gatgaaatgg tggcggtggt taaaatcaat gaaagggttt
      421 tagattgttt ggtgatttcc aagagtgttg tagcaggtaa ggatggtaaa agtgaagata
      481 aaatatgaaa atggacgaaa ctactccttt ttcataactt ttggtttgtg tgtttggttt
      541 ttatattatt actgttgaaa taattgcacg aacaacttat gttgcagggg attgaatcat
      601 atagctttat gagatatggg tggaagtaag caacgtgatt ttgagaaatg ggaatttatg
      661 acccatttgg ctcatacacg actatattga cccatatgca ttattttaag aaacaaaaac
      721 aaccaactca tttgaaagac cattttattt tttttaaata atttgtattg atttatcttg
      781 gttatagtaa gggttttttc atttgttatg ttattttagt aagttatggt agaatgtcaa
      841 ctacacaaag gaaaaaaaaa aggatgttat ttatgtttta cgtatctact gatgttgttg
      901 gtggcaatgt tattcctttt aggtccacaa ctgttatttt taaactaacg actaggagac
      961 gtacattttg tcgagcaaat tgtgtggacc cattgggttt ttcgatgtct gcatttttgg
     1021 agctatctca actttctgga gccaaacatt aacttgcggg tgtgcgctca tctctgttac
     1081 cgtcgtttgc ttttagagtt tacaacgttg tcaggttgtt aataataatt gcgtccattc
     1141 gaatgtg
//
LOCUS       XR_011778615             418 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903990), ncRNA.
ACCESSION   XR_011778615
VERSION     XR_011778615.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..418
                     /gene="LOC139903990"
                     /note="uncharacterized LOC139903990; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903990"
     ncRNA           1..418
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903990"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139903990"
ORIGIN      
        1 ccagatttga acaatcatgg tgaagaactt gtttgccttg atcctcgaca atttcttttt
       61 taatgggtaa agtccacaca tcattgatca agtttcagta ggcaagcatg ggtctggtat
      121 ctttacgtcc agataaaaaa gtccaattct tgaacagata tttgagctca agcgattacc
      181 aagttaccca acccgtccat tttgacaggc ctgtatcttg caagtcccga tttaaaaaat
      241 tatcattcga cgacacgcct cttctagcca tttgactcgg cgaataccga ttaaccagaa
      301 attgacggaa aatcatttta cagatatttg gatgctggaa tattgaacat tgtctgcaaa
      361 tccattttta acaaagctaa cgacacgccg gcatttggtc attttttata taggtaac
//
LOCUS       XM_071885921            1002 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139903991), mRNA.
ACCESSION   XM_071885921
VERSION     XM_071885921.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1002
                     /gene="LOC139903991"
                     /note="uncharacterized LOC139903991; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903991"
     CDS             41..658
                     /gene="LOC139903991"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742022.1"
                     /db_xref="GeneID:139903991"
                     /translation="MINSEINTIDLGTNVAGATTFQKKPVSVTKKVALRDVQNNNNNF
                     TREFHHKSLLPFEGQSFLDASKTSGTKRRTPDHTLPLFCERSANVSQKQQNVSQINGK
                     SMHYGSSVGPNQMGSKTSVPRFKESTSEEQRTDRFIRLQRYIKQCDGSNDRENIQLLM
                     RLSPSELSRHAVELEKRAIQLTIEEGKEMKRIQALNVLGTSITRN"
     misc_feature    <488..634
                     /gene="LOC139903991"
                     /note="Retinal tissue protein; Region: LIN52; pfam10044"
                     /db_xref="CDD:462950"
ORIGIN      
        1 ttaaacgaac ttgtaggcga ggacttattt atttataaaa atgattaatt ctgagattaa
       61 tacgattgat ctcgggacca atgtagctgg tgcaaccacg ttccaaaaaa aaccggtttc
      121 agtaacgaaa aaggtagcac tacgagatgt acagaacaat aataataact ttacacgtga
      181 atttcatcac aaaagtttgc ttccgtttga gggacaatcg tttttagatg catctaaaac
      241 gagtggaact aaaagacgta ctcccgacca cacattacct ctgttttgtg aacggtctgc
      301 aaatgtatct caaaagcagc aaaatgtgag ccagataaat gggaagagta tgcattatgg
      361 ttcttcggtg ggaccaaacc aaatgggatc gaaaacatcg gttcctaggt ttaaagagtc
      421 tactagtgag gaacaaagga cagaccgatt tattcgctta cagagatata ttaaacagtg
      481 tgatggatct aatgatagag agaatattca gttgctgatg cgtttatcgc cctctgagct
      541 tagcagacat gcagttgagt tagagaaaag agcaattcag ttgaccattg aagaaggtaa
      601 agaaatgaaa cgaatccaag cgttgaatgt tctgggaact tcgataacca gaaattaaat
      661 gcgaataacg caactcacga caactgaatt ctatttctgc aaataggtgg caaaataatc
      721 aacggagatt ggaccctcat agaagataca gaagatgaaa aagtgaggaa atgtggagac
      781 tctgcggtaa aagaacataa tcaccagaag catacttatt tgtattttgt tagtgtgaaa
      841 gatggcgaga ccaaggaaga cggtgggaca cattacaata tgattattga agtagacgat
      901 gaagatgcta tttttaaaaa gtttttagtt tatgttattg acaaagggaa tcaagatgat
      961 tatgagcttg tttcctttaa aagacctttt aaattatgtt tg
//
LOCUS       XM_071885922             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At5g01610-like (LOC139903992), mRNA.
ACCESSION   XM_071885922
VERSION     XM_071885922.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139903992"
                     /note="uncharacterized protein At5g01610-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139903992"
     CDS             1..501
                     /gene="LOC139903992"
                     /codon_start=1
                     /product="uncharacterized protein At5g01610-like"
                     /protein_id="XP_071742023.1"
                     /db_xref="GeneID:139903992"
                     /translation="MDQIMGYWFSNKAGKEIDSVSKDINNVPKNIKGGAHKMVTKVTE
                     KKQKPLAELLQEFDLPAGIFPREVKKYEFDEETKKLTVHLPSICEVSYRDSSILRFST
                     SVTGHIEKGKLTEIEGLKTKVVLWIKVTCIVSEDSKLHFSAGLTKTRERKMYQVIRDG
                     VPVDKF"
     misc_feature    154..447
                     /gene="LOC139903992"
                     /note="Protein of unknown function, DUF538; Region:
                     DUF538; pfam04398"
                     /db_xref="CDD:461290"
ORIGIN      
        1 atggaccaga ttatgggcta ttggtttagt aacaaagccg gcaaagaaat agattccgta
       61 agcaaggata ttaataatgt gccaaaaaat atcaaaggag gagcacacaa aatggtcact
      121 aaagtaacag aaaaaaagca aaagccattg gctgaactgc tgcaagagtt tgatttacca
      181 gctggtatct ttccacgcga ggttaaaaag tacgagtttg acgaagaaac aaaaaagcta
      241 acggttcatt tgccatctat atgtgaagtt agctatagag actcgtccat tttaagattt
      301 tcaacgagcg taacaggtca tattgagaaa ggaaaactaa cagagattga aggactaaaa
      361 accaaagtgg tgttgtggat taaagttaca tgcattgttt ctgaagattc caagctgcat
      421 ttcagtgcag ggttaaccaa gaccagagaa aggaaaatgt atcaggttat tagagatgga
      481 gtgcctgtag ataagtttta a
//
LOCUS       XM_071885923            1489 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chitinase CLP-like
            (LOC139903993), mRNA.
ACCESSION   XM_071885923
VERSION     XM_071885923.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1489
                     /gene="LOC139903993"
                     /note="chitinase CLP-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139903993"
     CDS             15..1328
                     /gene="LOC139903993"
                     /codon_start=1
                     /product="chitinase CLP-like"
                     /protein_id="XP_071742024.1"
                     /db_xref="GeneID:139903993"
                     /translation="MYLLLQLVAIVLAFISHKHEAIAQYVPPYTSIVVPITKHTDAAK
                     PLYSIQIMTSFVNMQYLHANFLIDIDAPLIWHDCILQWNIYPGSCPNNTLCTSPVSCN
                     EYQCTDVRTTYSYENPSCPPVTNSSTLPGWGDCTCPVNAVNPVTGACDQVLLNYDEFT
                     VNTSNGKNVFTGLYGAYPNAACAPSSSFASFPANVSGVMAFSSSPYALPAYLFQPLKK
                     TLALCLPSNSSTRGVLFFGSGPYYLLPNSDVDLRSQLSYTPLLKQSDSFGYFIGIKDI
                     IVKQIYCNILPSNTTTKLSTTEPYTTLRTDIYKRVVKAFSVATIGIPRASPVVPFGLC
                     FKSLTRGPQGGLKFPEIDFSLENGKNWTVSVANSMKQITEDVTCLAFVDGGVTPEHAI
                     VIGTFQFEDNFLQFDLENSTFGFSSSLLNKQTSCSNFNFTLTDGN"
     misc_feature    201..1271
                     /gene="LOC139903993"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(216..218,222..224,228..230,432..440,606..608)
                     /gene="LOC139903993"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    216..224
                     /gene="LOC139903993"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    216..218
                     /gene="LOC139903993"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(432..443,459..470)
                     /gene="LOC139903993"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 acaaaccttc aaaaatgtat ttacttctac aactagttgc tatagttcta gccttcatct
       61 ctcataaaca tgaagccata gctcaatatg taccaccata cacttccata gttgttccaa
      121 taaccaaaca tactgacgcc gctaaacctc tctatagcat tcaaatcatg acatcattcg
      181 taaacatgca atacttgcat gcaaatttcc ttatagacat cgacgctcca ctcatatggc
      241 acgactgcat cctacaatgg aacatatatc caggaagttg cccaaacaac acactttgca
      301 catcccctgt ttcttgtaac gagtatcaat gcacggatgt tcgaactacg tactcttacg
      361 aaaatccttc ttgccctcca gtaaccaaca gttcgacgtt acctggttgg ggagattgta
      421 catgcccggt caatgcagtc aaccctgtta ccggggcatg tgaccaagtc ctactcaact
      481 acgatgagtt caccgtgaac acaagtaatg gcaaaaatgt tttcaccggc ttatacggtg
      541 cgtaccctaa tgcggcttgc gctccatctt catcgtttgc atcgttccct gcaaatgtta
      601 gtggcgtcat ggcgttttca tcttcaccct acgcgttacc agcttattta tttcaaccac
      661 ttaaaaaaac attagcttta tgtttgccta gcaattcgtc tactcgtggg gttctttttt
      721 tcggatcggg tccttattat cttcttccca actcggatgt tgacttaagg agtcaacttt
      781 cttacactcc gttactaaag caatcagact ccttcggata ctttataggt atcaaggaca
      841 ttatagtcaa acaaatatat tgtaacatac ttccctcgaa taccactact aagcttagta
      901 caaccgagcc ttacaccact cttagaaccg atatttataa acgtgtggtt aaagcatttt
      961 cggtcgctac aatagggatc cctcgtgcga gtccagttgt tccgtttggc ctttgtttta
     1021 aaagcttaac gaggggccca caaggtggtt taaagtttcc tgagattgat ttcagtcttg
     1081 aaaatggaaa gaattggact gtatctgtgg ctaactccat gaaacagata acagaagatg
     1141 ttacatgtct ggcttttgtt gacggtggtg tgacaccaga gcatgcaatt gtgattggaa
     1201 cgtttcagtt tgaggataac tttttgcagt ttgatttgga gaattcgact tttggtttta
     1261 gttcttcact gttaaataag caaacttctt gctcaaactt taactttaca cttactgacg
     1321 gaaattgaag ctatccagat atttaaggca ttcaactgaa aatggataat catccaagta
     1381 tctacaattg tttgttttat taaaatacaa tgttcagtat tcaactgtaa tcagtttgtg
     1441 tatgatttat aataatgttg gttcatatat acatattata taaatgatt
//
LOCUS       XM_071885924            2683 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium transporter 2-like
            (LOC139903994), transcript variant X1, mRNA.
ACCESSION   XM_071885924
VERSION     XM_071885924.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2683
                     /gene="LOC139903994"
                     /note="potassium transporter 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins"
                     /db_xref="GeneID:139903994"
     CDS             239..2572
                     /gene="LOC139903994"
                     /codon_start=1
                     /product="potassium transporter 2-like isoform X1"
                     /protein_id="XP_071742025.1"
                     /db_xref="GeneID:139903994"
                     /translation="MRSMDLEDKKLSGNAKKDTWRTKLVLAYQSLGVVYGDLSISPIY
                     VYKSTFADDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYS
                     SICRHAKVSLVPNRQIADESLSTYKLKQPPEGENSSKVKMLLEKHKTLHTALLILVLL
                     GTCMVIGDGLLTPTISVFTAVSGLELSMSKEHHEYAVIPITCFILVCLFALQHYGTHR
                     LGPVFAPIVLLWLLCISGLGLYNIFRWDPHVYKALSPYYMYKFLKKTKKRGWMSLGGI
                     LLCITGSEAMFADLGHFTYSAIQIAFTFLVYPALILAYMGQAAYFSKHHQMTHAISYY
                     VSVPEIVRWPVLVLAILASVVGSQSIISGTFSIINQSQSLGCFPRVKVVHTSDNKHGQ
                     IYIPEINWILMILCIAVTTGFRDTKHMGNASGLAVMAVMLVTTCLTSLVIILCWHKPP
                     ILALCFLLFFGSIELLYFSASLVKFREGAWLPLLLALFLVTIMFVWHYATTKKYEYDL
                     QNKVSLEWLLALGPSLGMSRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCV
                     KVVPVPFVPPSERYLMGRVGPVNLRSYRCIVRYGYRDVHQDVDSFESELVNRIADFIR
                     YDWCHPELSSDPGNEDDDRLAVIGHSDLATSRPFKSEESIQQVSVSVGFPTIENDPQL
                     RKRRVTFAIDDDQNDSDDPKDEQMRELHDLLDAQESGTAFILGHSHVKAKQGSSVFKR
                     LAIDLAYNFLRRNCRGPDVVLKVPPSSLLEVGMVYVV"
     misc_feature    248..2569
                     /gene="LOC139903994"
                     /note="K+ potassium transporter; Region: K_trans; cl15781"
                     /db_xref="CDD:449589"
ORIGIN      
        1 aatgactttt atttcttctt tgttttaaat caacaacaca tacgatatgt attgagttcg
       61 gctacagaga ggaaaaaaga ggcaacggat ttcctttcgt gtttattttt tattcttgac
      121 agtaggagga gatgttggag aaattgtcag tttaaaatac cccatgagtt tcagcatttt
      181 tcaatattca atttaaaacc tttatcacac ttgtattaaa ggaaattaat attggattat
      241 gagaagcatg gatcttgaag acaaaaaact ttccggaaat gctaagaagg atacttggag
      301 aacaaaattg gtgttagctt atcagagtct tggtgtagtt tatggtgacc tcagcatttc
      361 acctatttat gtgtacaaaa gcacatttgc agatgatatt catcattcag aaacaaatga
      421 agagatattt ggtgtgctgt catttgtttt ctggacttta actctcgtac ctttgttcaa
      481 atacgtcttc attgttcttc gagctgatga caacggtgaa ggtggaactt ttgccctcta
      541 ttcttctata tgccggcatg cgaaagtaag tcttgtacca aaccgacaaa ttgctgatga
      601 atcactctca acatataaac tcaagcaacc cccagaaggt gaaaatagct caaaagtgaa
      661 aatgttgctt gaaaagcaca aaacattgca tacagcttta ctaatcttgg ttcttcttgg
      721 cacttgtatg gtaattggag atggactcct tactccaacc atatctgttt ttactgcggt
      781 ttctgggctt gagttatcaa tgtctaaaga acaccatgaa tatgctgtga taccgattac
      841 ctgcttcata ttagtgtgcc tatttgctct ccaacattat ggcacacatc ggttgggtcc
      901 tgtttttgct ccaatagttc tattgtggtt gttatgcata agtggacttg gattatacaa
      961 tatatttcgt tgggacccac atgtttacaa agctctttcg ccctattata tgtataaatt
     1021 tttgaagaag acgaaaaaaa gagggtggat gtctttgggt ggcattttgc tgtgtatcac
     1081 aggatcagaa gcaatgtttg ctgatcttgg tcatttcaca tattctgcaa ttcagattgc
     1141 tttcaccttc cttgtatatc ctgcactaat acttgcttac atgggacaag cagcttactt
     1201 ctcaaaacat caccaaatga cacacgcaat tagttattat gtttccgtgc cagaaatagt
     1261 aaggtggccg gtgcttgttt tagctattct tgcgtctgtt gttgggagtc aatcaatcat
     1321 aagtggaaca ttctcgatca ttaaccagag tcaatccctc ggttgttttc cgagagttaa
     1381 ggttgttcat acatctgaca acaaacatgg tcagatttac atccctgaga ttaactggat
     1441 acttatgatc ttatgcattg ctgtcaccac tggtttcagg gatacaaaac acatgggaaa
     1501 tgcatcagga ttggctgtta tggcagtaat gctcgttact acttgcctga cgtcattggt
     1561 gattattctt tgttggcata aacctcccat tctggccctt tgtttcttac tattcttcgg
     1621 ttcgatagag ttactctatt tctcggcttc tttagtcaag tttcgtgaag gtgcatggct
     1681 cccgctactc ttggcactat ttctcgttac cataatgttc gtttggcact acgccactac
     1741 caaaaagtac gaatatgatc ttcaaaataa ggtctcttta gaatggttac tagctttagg
     1801 tccaagttta ggcatgtcta gggtacccgg gatcgggctc gtgtttacgg atcttacttc
     1861 tggtatccca gccaacttct cacggttcgt gactaatctt cctgcgtttc atcgtatttt
     1921 ggtgtttgtg tgtgtgaaag ttgtacctgt tccttttgtt cctccaagtg agaggtacct
     1981 tatgggccga gtgggacccg tgaatcttag gtcgtatagg tgtattgtac gatatgggta
     2041 tcgtgatgtt caccaagatg tggattcgtt tgagtctgaa cttgtgaacc ggatcgctga
     2101 ctttatccgt tatgactggt gccaccctga actatctagt gatccaggta atgaagatga
     2161 cgatcggctt gcagtaatag gacactcaga cttagcgaca tctcgtcctt ttaaatcaga
     2221 agaaagtata caacaagtta gtgtatctgt tgggtttcca acaattgaaa atgacccaca
     2281 actgagaaaa aggagagtaa catttgctat tgatgatgat caaaatgatt ctgacgatcc
     2341 aaaagacgag cagatgagag aacttcacga tttattagat gctcaagaaa gcggaactgc
     2401 attcatactt ggacactcgc acgtgaaagc aaaacaagga tcgtcggttt tcaagaggct
     2461 tgcgattgat ttagcctata attttcttag gcgaaattgt aggggaccag atgtggtgct
     2521 aaaggtgccc ccatcatctt tgttagaagt tggcatggtt tatgttgtat aaaacttatt
     2581 acataactag attgcatttg ttcatattta aagaagatca caagggatta tcactaaaaa
     2641 gtccattttt ttaaccttat ttgcgtgaga gcccaaaaaa taa
//
LOCUS       XM_071885925            3036 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium transporter 2-like
            (LOC139903994), transcript variant X2, mRNA.
ACCESSION   XM_071885925
VERSION     XM_071885925.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3036
                     /gene="LOC139903994"
                     /note="potassium transporter 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins"
                     /db_xref="GeneID:139903994"
     CDS             592..2925
                     /gene="LOC139903994"
                     /codon_start=1
                     /product="potassium transporter 2-like isoform X1"
                     /protein_id="XP_071742026.1"
                     /db_xref="GeneID:139903994"
                     /translation="MRSMDLEDKKLSGNAKKDTWRTKLVLAYQSLGVVYGDLSISPIY
                     VYKSTFADDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYS
                     SICRHAKVSLVPNRQIADESLSTYKLKQPPEGENSSKVKMLLEKHKTLHTALLILVLL
                     GTCMVIGDGLLTPTISVFTAVSGLELSMSKEHHEYAVIPITCFILVCLFALQHYGTHR
                     LGPVFAPIVLLWLLCISGLGLYNIFRWDPHVYKALSPYYMYKFLKKTKKRGWMSLGGI
                     LLCITGSEAMFADLGHFTYSAIQIAFTFLVYPALILAYMGQAAYFSKHHQMTHAISYY
                     VSVPEIVRWPVLVLAILASVVGSQSIISGTFSIINQSQSLGCFPRVKVVHTSDNKHGQ
                     IYIPEINWILMILCIAVTTGFRDTKHMGNASGLAVMAVMLVTTCLTSLVIILCWHKPP
                     ILALCFLLFFGSIELLYFSASLVKFREGAWLPLLLALFLVTIMFVWHYATTKKYEYDL
                     QNKVSLEWLLALGPSLGMSRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCV
                     KVVPVPFVPPSERYLMGRVGPVNLRSYRCIVRYGYRDVHQDVDSFESELVNRIADFIR
                     YDWCHPELSSDPGNEDDDRLAVIGHSDLATSRPFKSEESIQQVSVSVGFPTIENDPQL
                     RKRRVTFAIDDDQNDSDDPKDEQMRELHDLLDAQESGTAFILGHSHVKAKQGSSVFKR
                     LAIDLAYNFLRRNCRGPDVVLKVPPSSLLEVGMVYVV"
     misc_feature    601..2922
                     /gene="LOC139903994"
                     /note="K+ potassium transporter; Region: K_trans; cl15781"
                     /db_xref="CDD:449589"
ORIGIN      
        1 atatttagac attaaccaac taaagaaaaa taaacaaata cactcaaaac atttttttct
       61 tcaaaactcg gggttgaaca agacgtcatt cctgtatctc cataaatacc agacggtcga
      121 agcaacaatg acacttagct tctctttaac ctccttaaca gcgcgccatc cttcaagcca
      181 aagaaaccaa tcattccaat ctgcaaacaa cggcatgtct atgtcgatcc atttgataac
      241 tcttcgccac acgtcatttg ccatcggaca atcaaacaaa acgtgttgca agtattcgac
      301 cccataatta catgacacac aaccagtccg ctctagctcc aaccttctat gtgataaatt
      361 aagatgcgta ggcaatctat ctcgagccac tctccagatg aaaatattaa tctttcttgg
      421 aagtaacttc acccaccatg tttttaagag acgttgttgg taagattctt gacagtagga
      481 ggagatgttg gagaaattgt cagtttaaaa taccccatga gtttcagcat ttttcaatat
      541 tcaatttaaa acctttatca cacttgtatt aaaggaaatt aatattggat tatgagaagc
      601 atggatcttg aagacaaaaa actttccgga aatgctaaga aggatacttg gagaacaaaa
      661 ttggtgttag cttatcagag tcttggtgta gtttatggtg acctcagcat ttcacctatt
      721 tatgtgtaca aaagcacatt tgcagatgat attcatcatt cagaaacaaa tgaagagata
      781 tttggtgtgc tgtcatttgt tttctggact ttaactctcg tacctttgtt caaatacgtc
      841 ttcattgttc ttcgagctga tgacaacggt gaaggtggaa cttttgccct ctattcttct
      901 atatgccggc atgcgaaagt aagtcttgta ccaaaccgac aaattgctga tgaatcactc
      961 tcaacatata aactcaagca acccccagaa ggtgaaaata gctcaaaagt gaaaatgttg
     1021 cttgaaaagc acaaaacatt gcatacagct ttactaatct tggttcttct tggcacttgt
     1081 atggtaattg gagatggact ccttactcca accatatctg tttttactgc ggtttctggg
     1141 cttgagttat caatgtctaa agaacaccat gaatatgctg tgataccgat tacctgcttc
     1201 atattagtgt gcctatttgc tctccaacat tatggcacac atcggttggg tcctgttttt
     1261 gctccaatag ttctattgtg gttgttatgc ataagtggac ttggattata caatatattt
     1321 cgttgggacc cacatgttta caaagctctt tcgccctatt atatgtataa atttttgaag
     1381 aagacgaaaa aaagagggtg gatgtctttg ggtggcattt tgctgtgtat cacaggatca
     1441 gaagcaatgt ttgctgatct tggtcatttc acatattctg caattcagat tgctttcacc
     1501 ttccttgtat atcctgcact aatacttgct tacatgggac aagcagctta cttctcaaaa
     1561 catcaccaaa tgacacacgc aattagttat tatgtttccg tgccagaaat agtaaggtgg
     1621 ccggtgcttg ttttagctat tcttgcgtct gttgttggga gtcaatcaat cataagtgga
     1681 acattctcga tcattaacca gagtcaatcc ctcggttgtt ttccgagagt taaggttgtt
     1741 catacatctg acaacaaaca tggtcagatt tacatccctg agattaactg gatacttatg
     1801 atcttatgca ttgctgtcac cactggtttc agggatacaa aacacatggg aaatgcatca
     1861 ggattggctg ttatggcagt aatgctcgtt actacttgcc tgacgtcatt ggtgattatt
     1921 ctttgttggc ataaacctcc cattctggcc ctttgtttct tactattctt cggttcgata
     1981 gagttactct atttctcggc ttctttagtc aagtttcgtg aaggtgcatg gctcccgcta
     2041 ctcttggcac tatttctcgt taccataatg ttcgtttggc actacgccac taccaaaaag
     2101 tacgaatatg atcttcaaaa taaggtctct ttagaatggt tactagcttt aggtccaagt
     2161 ttaggcatgt ctagggtacc cgggatcggg ctcgtgttta cggatcttac ttctggtatc
     2221 ccagccaact tctcacggtt cgtgactaat cttcctgcgt ttcatcgtat tttggtgttt
     2281 gtgtgtgtga aagttgtacc tgttcctttt gttcctccaa gtgagaggta ccttatgggc
     2341 cgagtgggac ccgtgaatct taggtcgtat aggtgtattg tacgatatgg gtatcgtgat
     2401 gttcaccaag atgtggattc gtttgagtct gaacttgtga accggatcgc tgactttatc
     2461 cgttatgact ggtgccaccc tgaactatct agtgatccag gtaatgaaga tgacgatcgg
     2521 cttgcagtaa taggacactc agacttagcg acatctcgtc cttttaaatc agaagaaagt
     2581 atacaacaag ttagtgtatc tgttgggttt ccaacaattg aaaatgaccc acaactgaga
     2641 aaaaggagag taacatttgc tattgatgat gatcaaaatg attctgacga tccaaaagac
     2701 gagcagatga gagaacttca cgatttatta gatgctcaag aaagcggaac tgcattcata
     2761 cttggacact cgcacgtgaa agcaaaacaa ggatcgtcgg ttttcaagag gcttgcgatt
     2821 gatttagcct ataattttct taggcgaaat tgtaggggac cagatgtggt gctaaaggtg
     2881 cccccatcat ctttgttaga agttggcatg gtttatgttg tataaaactt attacataac
     2941 tagattgcat ttgttcatat ttaaagaaga tcacaaggga ttatcactaa aaagtccatt
     3001 tttttaacct tatttgcgtg agagcccaaa aaataa
//
LOCUS       XM_071885926            2550 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium transporter 2-like
            (LOC139903994), transcript variant X3, mRNA.
ACCESSION   XM_071885926
VERSION     XM_071885926.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2550
                     /gene="LOC139903994"
                     /note="potassium transporter 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins"
                     /db_xref="GeneID:139903994"
     CDS             106..2439
                     /gene="LOC139903994"
                     /codon_start=1
                     /product="potassium transporter 2-like isoform X1"
                     /protein_id="XP_071742027.1"
                     /db_xref="GeneID:139903994"
                     /translation="MRSMDLEDKKLSGNAKKDTWRTKLVLAYQSLGVVYGDLSISPIY
                     VYKSTFADDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYS
                     SICRHAKVSLVPNRQIADESLSTYKLKQPPEGENSSKVKMLLEKHKTLHTALLILVLL
                     GTCMVIGDGLLTPTISVFTAVSGLELSMSKEHHEYAVIPITCFILVCLFALQHYGTHR
                     LGPVFAPIVLLWLLCISGLGLYNIFRWDPHVYKALSPYYMYKFLKKTKKRGWMSLGGI
                     LLCITGSEAMFADLGHFTYSAIQIAFTFLVYPALILAYMGQAAYFSKHHQMTHAISYY
                     VSVPEIVRWPVLVLAILASVVGSQSIISGTFSIINQSQSLGCFPRVKVVHTSDNKHGQ
                     IYIPEINWILMILCIAVTTGFRDTKHMGNASGLAVMAVMLVTTCLTSLVIILCWHKPP
                     ILALCFLLFFGSIELLYFSASLVKFREGAWLPLLLALFLVTIMFVWHYATTKKYEYDL
                     QNKVSLEWLLALGPSLGMSRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCV
                     KVVPVPFVPPSERYLMGRVGPVNLRSYRCIVRYGYRDVHQDVDSFESELVNRIADFIR
                     YDWCHPELSSDPGNEDDDRLAVIGHSDLATSRPFKSEESIQQVSVSVGFPTIENDPQL
                     RKRRVTFAIDDDQNDSDDPKDEQMRELHDLLDAQESGTAFILGHSHVKAKQGSSVFKR
                     LAIDLAYNFLRRNCRGPDVVLKVPPSSLLEVGMVYVV"
     misc_feature    115..2436
                     /gene="LOC139903994"
                     /note="K+ potassium transporter; Region: K_trans; cl15781"
                     /db_xref="CDD:449589"
ORIGIN      
        1 tttaaatcaa caacacatac gatatgtatt gagttcggct acagagagga aaaaagaggc
       61 aacggatttc ctttcgtgtt tattttttga aattaatatt ggattatgag aagcatggat
      121 cttgaagaca aaaaactttc cggaaatgct aagaaggata cttggagaac aaaattggtg
      181 ttagcttatc agagtcttgg tgtagtttat ggtgacctca gcatttcacc tatttatgtg
      241 tacaaaagca catttgcaga tgatattcat cattcagaaa caaatgaaga gatatttggt
      301 gtgctgtcat ttgttttctg gactttaact ctcgtacctt tgttcaaata cgtcttcatt
      361 gttcttcgag ctgatgacaa cggtgaaggt ggaacttttg ccctctattc ttctatatgc
      421 cggcatgcga aagtaagtct tgtaccaaac cgacaaattg ctgatgaatc actctcaaca
      481 tataaactca agcaaccccc agaaggtgaa aatagctcaa aagtgaaaat gttgcttgaa
      541 aagcacaaaa cattgcatac agctttacta atcttggttc ttcttggcac ttgtatggta
      601 attggagatg gactccttac tccaaccata tctgttttta ctgcggtttc tgggcttgag
      661 ttatcaatgt ctaaagaaca ccatgaatat gctgtgatac cgattacctg cttcatatta
      721 gtgtgcctat ttgctctcca acattatggc acacatcggt tgggtcctgt ttttgctcca
      781 atagttctat tgtggttgtt atgcataagt ggacttggat tatacaatat atttcgttgg
      841 gacccacatg tttacaaagc tctttcgccc tattatatgt ataaattttt gaagaagacg
      901 aaaaaaagag ggtggatgtc tttgggtggc attttgctgt gtatcacagg atcagaagca
      961 atgtttgctg atcttggtca tttcacatat tctgcaattc agattgcttt caccttcctt
     1021 gtatatcctg cactaatact tgcttacatg ggacaagcag cttacttctc aaaacatcac
     1081 caaatgacac acgcaattag ttattatgtt tccgtgccag aaatagtaag gtggccggtg
     1141 cttgttttag ctattcttgc gtctgttgtt gggagtcaat caatcataag tggaacattc
     1201 tcgatcatta accagagtca atccctcggt tgttttccga gagttaaggt tgttcataca
     1261 tctgacaaca aacatggtca gatttacatc cctgagatta actggatact tatgatctta
     1321 tgcattgctg tcaccactgg tttcagggat acaaaacaca tgggaaatgc atcaggattg
     1381 gctgttatgg cagtaatgct cgttactact tgcctgacgt cattggtgat tattctttgt
     1441 tggcataaac ctcccattct ggccctttgt ttcttactat tcttcggttc gatagagtta
     1501 ctctatttct cggcttcttt agtcaagttt cgtgaaggtg catggctccc gctactcttg
     1561 gcactatttc tcgttaccat aatgttcgtt tggcactacg ccactaccaa aaagtacgaa
     1621 tatgatcttc aaaataaggt ctctttagaa tggttactag ctttaggtcc aagtttaggc
     1681 atgtctaggg tacccgggat cgggctcgtg tttacggatc ttacttctgg tatcccagcc
     1741 aacttctcac ggttcgtgac taatcttcct gcgtttcatc gtattttggt gtttgtgtgt
     1801 gtgaaagttg tacctgttcc ttttgttcct ccaagtgaga ggtaccttat gggccgagtg
     1861 ggacccgtga atcttaggtc gtataggtgt attgtacgat atgggtatcg tgatgttcac
     1921 caagatgtgg attcgtttga gtctgaactt gtgaaccgga tcgctgactt tatccgttat
     1981 gactggtgcc accctgaact atctagtgat ccaggtaatg aagatgacga tcggcttgca
     2041 gtaataggac actcagactt agcgacatct cgtcctttta aatcagaaga aagtatacaa
     2101 caagttagtg tatctgttgg gtttccaaca attgaaaatg acccacaact gagaaaaagg
     2161 agagtaacat ttgctattga tgatgatcaa aatgattctg acgatccaaa agacgagcag
     2221 atgagagaac ttcacgattt attagatgct caagaaagcg gaactgcatt catacttgga
     2281 cactcgcacg tgaaagcaaa acaaggatcg tcggttttca agaggcttgc gattgattta
     2341 gcctataatt ttcttaggcg aaattgtagg ggaccagatg tggtgctaaa ggtgccccca
     2401 tcatctttgt tagaagttgg catggtttat gttgtataaa acttattaca taactagatt
     2461 gcatttgttc atatttaaag aagatcacaa gggattatca ctaaaaagtc cattttttta
     2521 accttatttg cgtgagagcc caaaaaataa
//
LOCUS       XM_071885927            2926 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium transporter 2-like
            (LOC139903994), transcript variant X4, mRNA.
ACCESSION   XM_071885927
VERSION     XM_071885927.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2926
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2926
                     /gene="LOC139903994"
                     /note="potassium transporter 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins"
                     /db_xref="GeneID:139903994"
     CDS             482..2815
                     /gene="LOC139903994"
                     /codon_start=1
                     /product="potassium transporter 2-like isoform X1"
                     /protein_id="XP_071742028.1"
                     /db_xref="GeneID:139903994"
                     /translation="MRSMDLEDKKLSGNAKKDTWRTKLVLAYQSLGVVYGDLSISPIY
                     VYKSTFADDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYS
                     SICRHAKVSLVPNRQIADESLSTYKLKQPPEGENSSKVKMLLEKHKTLHTALLILVLL
                     GTCMVIGDGLLTPTISVFTAVSGLELSMSKEHHEYAVIPITCFILVCLFALQHYGTHR
                     LGPVFAPIVLLWLLCISGLGLYNIFRWDPHVYKALSPYYMYKFLKKTKKRGWMSLGGI
                     LLCITGSEAMFADLGHFTYSAIQIAFTFLVYPALILAYMGQAAYFSKHHQMTHAISYY
                     VSVPEIVRWPVLVLAILASVVGSQSIISGTFSIINQSQSLGCFPRVKVVHTSDNKHGQ
                     IYIPEINWILMILCIAVTTGFRDTKHMGNASGLAVMAVMLVTTCLTSLVIILCWHKPP
                     ILALCFLLFFGSIELLYFSASLVKFREGAWLPLLLALFLVTIMFVWHYATTKKYEYDL
                     QNKVSLEWLLALGPSLGMSRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCV
                     KVVPVPFVPPSERYLMGRVGPVNLRSYRCIVRYGYRDVHQDVDSFESELVNRIADFIR
                     YDWCHPELSSDPGNEDDDRLAVIGHSDLATSRPFKSEESIQQVSVSVGFPTIENDPQL
                     RKRRVTFAIDDDQNDSDDPKDEQMRELHDLLDAQESGTAFILGHSHVKAKQGSSVFKR
                     LAIDLAYNFLRRNCRGPDVVLKVPPSSLLEVGMVYVV"
     misc_feature    491..2812
                     /gene="LOC139903994"
                     /note="K+ potassium transporter; Region: K_trans; cl15781"
                     /db_xref="CDD:449589"
ORIGIN      
        1 atatttagac attaaccaac taaagaaaaa taaacaaata cactcaaaac atttttttct
       61 tcaaaactcg gggttgaaca agacgtcatt cctgtatctc cataaatacc agacggtcga
      121 agcaacaatg acacttagct tctctttaac ctccttaaca gcgcgccatc cttcaagcca
      181 aagaaaccaa tcattccaat ctgcaaacaa cggcatgtct atgtcgatcc atttgataac
      241 tcttcgccac acgtcatttg ccatcggaca atcaaacaaa acgtgttgca agtattcgac
      301 cccataatta catgacacac aaccagtccg ctctagctcc aaccttctat gtgataaatt
      361 aagatgcgta ggcaatctat ctcgagccac tctccagatg aaaatattaa tctttcttgg
      421 aagtaacttc acccaccatg tttttaagag acgttgttgg taaggaaatt aatattggat
      481 tatgagaagc atggatcttg aagacaaaaa actttccgga aatgctaaga aggatacttg
      541 gagaacaaaa ttggtgttag cttatcagag tcttggtgta gtttatggtg acctcagcat
      601 ttcacctatt tatgtgtaca aaagcacatt tgcagatgat attcatcatt cagaaacaaa
      661 tgaagagata tttggtgtgc tgtcatttgt tttctggact ttaactctcg tacctttgtt
      721 caaatacgtc ttcattgttc ttcgagctga tgacaacggt gaaggtggaa cttttgccct
      781 ctattcttct atatgccggc atgcgaaagt aagtcttgta ccaaaccgac aaattgctga
      841 tgaatcactc tcaacatata aactcaagca acccccagaa ggtgaaaata gctcaaaagt
      901 gaaaatgttg cttgaaaagc acaaaacatt gcatacagct ttactaatct tggttcttct
      961 tggcacttgt atggtaattg gagatggact ccttactcca accatatctg tttttactgc
     1021 ggtttctggg cttgagttat caatgtctaa agaacaccat gaatatgctg tgataccgat
     1081 tacctgcttc atattagtgt gcctatttgc tctccaacat tatggcacac atcggttggg
     1141 tcctgttttt gctccaatag ttctattgtg gttgttatgc ataagtggac ttggattata
     1201 caatatattt cgttgggacc cacatgttta caaagctctt tcgccctatt atatgtataa
     1261 atttttgaag aagacgaaaa aaagagggtg gatgtctttg ggtggcattt tgctgtgtat
     1321 cacaggatca gaagcaatgt ttgctgatct tggtcatttc acatattctg caattcagat
     1381 tgctttcacc ttccttgtat atcctgcact aatacttgct tacatgggac aagcagctta
     1441 cttctcaaaa catcaccaaa tgacacacgc aattagttat tatgtttccg tgccagaaat
     1501 agtaaggtgg ccggtgcttg ttttagctat tcttgcgtct gttgttggga gtcaatcaat
     1561 cataagtgga acattctcga tcattaacca gagtcaatcc ctcggttgtt ttccgagagt
     1621 taaggttgtt catacatctg acaacaaaca tggtcagatt tacatccctg agattaactg
     1681 gatacttatg atcttatgca ttgctgtcac cactggtttc agggatacaa aacacatggg
     1741 aaatgcatca ggattggctg ttatggcagt aatgctcgtt actacttgcc tgacgtcatt
     1801 ggtgattatt ctttgttggc ataaacctcc cattctggcc ctttgtttct tactattctt
     1861 cggttcgata gagttactct atttctcggc ttctttagtc aagtttcgtg aaggtgcatg
     1921 gctcccgcta ctcttggcac tatttctcgt taccataatg ttcgtttggc actacgccac
     1981 taccaaaaag tacgaatatg atcttcaaaa taaggtctct ttagaatggt tactagcttt
     2041 aggtccaagt ttaggcatgt ctagggtacc cgggatcggg ctcgtgttta cggatcttac
     2101 ttctggtatc ccagccaact tctcacggtt cgtgactaat cttcctgcgt ttcatcgtat
     2161 tttggtgttt gtgtgtgtga aagttgtacc tgttcctttt gttcctccaa gtgagaggta
     2221 ccttatgggc cgagtgggac ccgtgaatct taggtcgtat aggtgtattg tacgatatgg
     2281 gtatcgtgat gttcaccaag atgtggattc gtttgagtct gaacttgtga accggatcgc
     2341 tgactttatc cgttatgact ggtgccaccc tgaactatct agtgatccag gtaatgaaga
     2401 tgacgatcgg cttgcagtaa taggacactc agacttagcg acatctcgtc cttttaaatc
     2461 agaagaaagt atacaacaag ttagtgtatc tgttgggttt ccaacaattg aaaatgaccc
     2521 acaactgaga aaaaggagag taacatttgc tattgatgat gatcaaaatg attctgacga
     2581 tccaaaagac gagcagatga gagaacttca cgatttatta gatgctcaag aaagcggaac
     2641 tgcattcata cttggacact cgcacgtgaa agcaaaacaa ggatcgtcgg ttttcaagag
     2701 gcttgcgatt gatttagcct ataattttct taggcgaaat tgtaggggac cagatgtggt
     2761 gctaaaggtg cccccatcat ctttgttaga agttggcatg gtttatgttg tataaaactt
     2821 attacataac tagattgcat ttgttcatat ttaaagaaga tcacaaggga ttatcactaa
     2881 aaagtccatt tttttaacct tatttgcgtg agagcccaaa aaataa
//
LOCUS       XM_071885928            2921 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium transporter 2-like
            (LOC139903994), transcript variant X5, mRNA.
ACCESSION   XM_071885928
VERSION     XM_071885928.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2921
                     /gene="LOC139903994"
                     /note="potassium transporter 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins"
                     /db_xref="GeneID:139903994"
     CDS             477..2810
                     /gene="LOC139903994"
                     /codon_start=1
                     /product="potassium transporter 2-like isoform X1"
                     /protein_id="XP_071742029.1"
                     /db_xref="GeneID:139903994"
                     /translation="MRSMDLEDKKLSGNAKKDTWRTKLVLAYQSLGVVYGDLSISPIY
                     VYKSTFADDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYS
                     SICRHAKVSLVPNRQIADESLSTYKLKQPPEGENSSKVKMLLEKHKTLHTALLILVLL
                     GTCMVIGDGLLTPTISVFTAVSGLELSMSKEHHEYAVIPITCFILVCLFALQHYGTHR
                     LGPVFAPIVLLWLLCISGLGLYNIFRWDPHVYKALSPYYMYKFLKKTKKRGWMSLGGI
                     LLCITGSEAMFADLGHFTYSAIQIAFTFLVYPALILAYMGQAAYFSKHHQMTHAISYY
                     VSVPEIVRWPVLVLAILASVVGSQSIISGTFSIINQSQSLGCFPRVKVVHTSDNKHGQ
                     IYIPEINWILMILCIAVTTGFRDTKHMGNASGLAVMAVMLVTTCLTSLVIILCWHKPP
                     ILALCFLLFFGSIELLYFSASLVKFREGAWLPLLLALFLVTIMFVWHYATTKKYEYDL
                     QNKVSLEWLLALGPSLGMSRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCV
                     KVVPVPFVPPSERYLMGRVGPVNLRSYRCIVRYGYRDVHQDVDSFESELVNRIADFIR
                     YDWCHPELSSDPGNEDDDRLAVIGHSDLATSRPFKSEESIQQVSVSVGFPTIENDPQL
                     RKRRVTFAIDDDQNDSDDPKDEQMRELHDLLDAQESGTAFILGHSHVKAKQGSSVFKR
                     LAIDLAYNFLRRNCRGPDVVLKVPPSSLLEVGMVYVV"
     misc_feature    486..2807
                     /gene="LOC139903994"
                     /note="K+ potassium transporter; Region: K_trans; cl15781"
                     /db_xref="CDD:449589"
ORIGIN      
        1 atatttagac attaaccaac taaagaaaaa taaacaaata cactcaaaac atttttttct
       61 tcaaaactcg gggttgaaca agacgtcatt cctgtatctc cataaatacc agacggtcga
      121 agcaacaatg acacttagct tctctttaac ctccttaaca gcgcgccatc cttcaagcca
      181 aagaaaccaa tcattccaat ctgcaaacaa cggcatgtct atgtcgatcc atttgataac
      241 tcttcgccac acgtcatttg ccatcggaca atcaaacaaa acgtgttgca agtattcgac
      301 cccataatta catgacacac aaccagtccg ctctagctcc aaccttctat gtgataaatt
      361 aagatgcgta ggcaatctat ctcgagccac tctccagatg aaaatattaa tctttcttgg
      421 aagtaacttc acccaccatg tttttaagag acgttgttgg aaattaatat tggattatga
      481 gaagcatgga tcttgaagac aaaaaacttt ccggaaatgc taagaaggat acttggagaa
      541 caaaattggt gttagcttat cagagtcttg gtgtagttta tggtgacctc agcatttcac
      601 ctatttatgt gtacaaaagc acatttgcag atgatattca tcattcagaa acaaatgaag
      661 agatatttgg tgtgctgtca tttgttttct ggactttaac tctcgtacct ttgttcaaat
      721 acgtcttcat tgttcttcga gctgatgaca acggtgaagg tggaactttt gccctctatt
      781 cttctatatg ccggcatgcg aaagtaagtc ttgtaccaaa ccgacaaatt gctgatgaat
      841 cactctcaac atataaactc aagcaacccc cagaaggtga aaatagctca aaagtgaaaa
      901 tgttgcttga aaagcacaaa acattgcata cagctttact aatcttggtt cttcttggca
      961 cttgtatggt aattggagat ggactcctta ctccaaccat atctgttttt actgcggttt
     1021 ctgggcttga gttatcaatg tctaaagaac accatgaata tgctgtgata ccgattacct
     1081 gcttcatatt agtgtgccta tttgctctcc aacattatgg cacacatcgg ttgggtcctg
     1141 tttttgctcc aatagttcta ttgtggttgt tatgcataag tggacttgga ttatacaata
     1201 tatttcgttg ggacccacat gtttacaaag ctctttcgcc ctattatatg tataaatttt
     1261 tgaagaagac gaaaaaaaga gggtggatgt ctttgggtgg cattttgctg tgtatcacag
     1321 gatcagaagc aatgtttgct gatcttggtc atttcacata ttctgcaatt cagattgctt
     1381 tcaccttcct tgtatatcct gcactaatac ttgcttacat gggacaagca gcttacttct
     1441 caaaacatca ccaaatgaca cacgcaatta gttattatgt ttccgtgcca gaaatagtaa
     1501 ggtggccggt gcttgtttta gctattcttg cgtctgttgt tgggagtcaa tcaatcataa
     1561 gtggaacatt ctcgatcatt aaccagagtc aatccctcgg ttgttttccg agagttaagg
     1621 ttgttcatac atctgacaac aaacatggtc agatttacat ccctgagatt aactggatac
     1681 ttatgatctt atgcattgct gtcaccactg gtttcaggga tacaaaacac atgggaaatg
     1741 catcaggatt ggctgttatg gcagtaatgc tcgttactac ttgcctgacg tcattggtga
     1801 ttattctttg ttggcataaa cctcccattc tggccctttg tttcttacta ttcttcggtt
     1861 cgatagagtt actctatttc tcggcttctt tagtcaagtt tcgtgaaggt gcatggctcc
     1921 cgctactctt ggcactattt ctcgttacca taatgttcgt ttggcactac gccactacca
     1981 aaaagtacga atatgatctt caaaataagg tctctttaga atggttacta gctttaggtc
     2041 caagtttagg catgtctagg gtacccggga tcgggctcgt gtttacggat cttacttctg
     2101 gtatcccagc caacttctca cggttcgtga ctaatcttcc tgcgtttcat cgtattttgg
     2161 tgtttgtgtg tgtgaaagtt gtacctgttc cttttgttcc tccaagtgag aggtacctta
     2221 tgggccgagt gggacccgtg aatcttaggt cgtataggtg tattgtacga tatgggtatc
     2281 gtgatgttca ccaagatgtg gattcgtttg agtctgaact tgtgaaccgg atcgctgact
     2341 ttatccgtta tgactggtgc caccctgaac tatctagtga tccaggtaat gaagatgacg
     2401 atcggcttgc agtaatagga cactcagact tagcgacatc tcgtcctttt aaatcagaag
     2461 aaagtataca acaagttagt gtatctgttg ggtttccaac aattgaaaat gacccacaac
     2521 tgagaaaaag gagagtaaca tttgctattg atgatgatca aaatgattct gacgatccaa
     2581 aagacgagca gatgagagaa cttcacgatt tattagatgc tcaagaaagc ggaactgcat
     2641 tcatacttgg acactcgcac gtgaaagcaa aacaaggatc gtcggttttc aagaggcttg
     2701 cgattgattt agcctataat tttcttaggc gaaattgtag gggaccagat gtggtgctaa
     2761 aggtgccccc atcatctttg ttagaagttg gcatggttta tgttgtataa aacttattac
     2821 ataactagat tgcatttgtt catatttaaa gaagatcaca agggattatc actaaaaagt
     2881 ccattttttt aaccttattt gcgtgagagc ccaaaaaata a
//
LOCUS       XM_071885929            2680 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium transporter 2-like
            (LOC139903994), transcript variant X6, mRNA.
ACCESSION   XM_071885929
VERSION     XM_071885929.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2680
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2680
                     /gene="LOC139903994"
                     /note="potassium transporter 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 40
                     Proteins"
                     /db_xref="GeneID:139903994"
     CDS             239..2569
                     /gene="LOC139903994"
                     /codon_start=1
                     /product="potassium transporter 2-like isoform X2"
                     /protein_id="XP_071742030.1"
                     /db_xref="GeneID:139903994"
                     /translation="MRSMDLEDKKLSGNAKDTWRTKLVLAYQSLGVVYGDLSISPIYV
                     YKSTFADDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYSS
                     ICRHAKVSLVPNRQIADESLSTYKLKQPPEGENSSKVKMLLEKHKTLHTALLILVLLG
                     TCMVIGDGLLTPTISVFTAVSGLELSMSKEHHEYAVIPITCFILVCLFALQHYGTHRL
                     GPVFAPIVLLWLLCISGLGLYNIFRWDPHVYKALSPYYMYKFLKKTKKRGWMSLGGIL
                     LCITGSEAMFADLGHFTYSAIQIAFTFLVYPALILAYMGQAAYFSKHHQMTHAISYYV
                     SVPEIVRWPVLVLAILASVVGSQSIISGTFSIINQSQSLGCFPRVKVVHTSDNKHGQI
                     YIPEINWILMILCIAVTTGFRDTKHMGNASGLAVMAVMLVTTCLTSLVIILCWHKPPI
                     LALCFLLFFGSIELLYFSASLVKFREGAWLPLLLALFLVTIMFVWHYATTKKYEYDLQ
                     NKVSLEWLLALGPSLGMSRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCVK
                     VVPVPFVPPSERYLMGRVGPVNLRSYRCIVRYGYRDVHQDVDSFESELVNRIADFIRY
                     DWCHPELSSDPGNEDDDRLAVIGHSDLATSRPFKSEESIQQVSVSVGFPTIENDPQLR
                     KRRVTFAIDDDQNDSDDPKDEQMRELHDLLDAQESGTAFILGHSHVKAKQGSSVFKRL
                     AIDLAYNFLRRNCRGPDVVLKVPPSSLLEVGMVYVV"
     misc_feature    248..2566
                     /gene="LOC139903994"
                     /note="K+ potassium transporter; Region: K_trans; cl15781"
                     /db_xref="CDD:449589"
ORIGIN      
        1 aatgactttt atttcttctt tgttttaaat caacaacaca tacgatatgt attgagttcg
       61 gctacagaga ggaaaaaaga ggcaacggat ttcctttcgt gtttattttt tattcttgac
      121 agtaggagga gatgttggag aaattgtcag tttaaaatac cccatgagtt tcagcatttt
      181 tcaatattca atttaaaacc tttatcacac ttgtattaaa ggaaattaat attggattat
      241 gagaagcatg gatcttgaag acaaaaaact ttccggaaat gctaaggata cttggagaac
      301 aaaattggtg ttagcttatc agagtcttgg tgtagtttat ggtgacctca gcatttcacc
      361 tatttatgtg tacaaaagca catttgcaga tgatattcat cattcagaaa caaatgaaga
      421 gatatttggt gtgctgtcat ttgttttctg gactttaact ctcgtacctt tgttcaaata
      481 cgtcttcatt gttcttcgag ctgatgacaa cggtgaaggt ggaacttttg ccctctattc
      541 ttctatatgc cggcatgcga aagtaagtct tgtaccaaac cgacaaattg ctgatgaatc
      601 actctcaaca tataaactca agcaaccccc agaaggtgaa aatagctcaa aagtgaaaat
      661 gttgcttgaa aagcacaaaa cattgcatac agctttacta atcttggttc ttcttggcac
      721 ttgtatggta attggagatg gactccttac tccaaccata tctgttttta ctgcggtttc
      781 tgggcttgag ttatcaatgt ctaaagaaca ccatgaatat gctgtgatac cgattacctg
      841 cttcatatta gtgtgcctat ttgctctcca acattatggc acacatcggt tgggtcctgt
      901 ttttgctcca atagttctat tgtggttgtt atgcataagt ggacttggat tatacaatat
      961 atttcgttgg gacccacatg tttacaaagc tctttcgccc tattatatgt ataaattttt
     1021 gaagaagacg aaaaaaagag ggtggatgtc tttgggtggc attttgctgt gtatcacagg
     1081 atcagaagca atgtttgctg atcttggtca tttcacatat tctgcaattc agattgcttt
     1141 caccttcctt gtatatcctg cactaatact tgcttacatg ggacaagcag cttacttctc
     1201 aaaacatcac caaatgacac acgcaattag ttattatgtt tccgtgccag aaatagtaag
     1261 gtggccggtg cttgttttag ctattcttgc gtctgttgtt gggagtcaat caatcataag
     1321 tggaacattc tcgatcatta accagagtca atccctcggt tgttttccga gagttaaggt
     1381 tgttcataca tctgacaaca aacatggtca gatttacatc cctgagatta actggatact
     1441 tatgatctta tgcattgctg tcaccactgg tttcagggat acaaaacaca tgggaaatgc
     1501 atcaggattg gctgttatgg cagtaatgct cgttactact tgcctgacgt cattggtgat
     1561 tattctttgt tggcataaac ctcccattct ggccctttgt ttcttactat tcttcggttc
     1621 gatagagtta ctctatttct cggcttcttt agtcaagttt cgtgaaggtg catggctccc
     1681 gctactcttg gcactatttc tcgttaccat aatgttcgtt tggcactacg ccactaccaa
     1741 aaagtacgaa tatgatcttc aaaataaggt ctctttagaa tggttactag ctttaggtcc
     1801 aagtttaggc atgtctaggg tacccgggat cgggctcgtg tttacggatc ttacttctgg
     1861 tatcccagcc aacttctcac ggttcgtgac taatcttcct gcgtttcatc gtattttggt
     1921 gtttgtgtgt gtgaaagttg tacctgttcc ttttgttcct ccaagtgaga ggtaccttat
     1981 gggccgagtg ggacccgtga atcttaggtc gtataggtgt attgtacgat atgggtatcg
     2041 tgatgttcac caagatgtgg attcgtttga gtctgaactt gtgaaccgga tcgctgactt
     2101 tatccgttat gactggtgcc accctgaact atctagtgat ccaggtaatg aagatgacga
     2161 tcggcttgca gtaataggac actcagactt agcgacatct cgtcctttta aatcagaaga
     2221 aagtatacaa caagttagtg tatctgttgg gtttccaaca attgaaaatg acccacaact
     2281 gagaaaaagg agagtaacat ttgctattga tgatgatcaa aatgattctg acgatccaaa
     2341 agacgagcag atgagagaac ttcacgattt attagatgct caagaaagcg gaactgcatt
     2401 catacttgga cactcgcacg tgaaagcaaa acaaggatcg tcggttttca agaggcttgc
     2461 gattgattta gcctataatt ttcttaggcg aaattgtagg ggaccagatg tggtgctaaa
     2521 ggtgccccca tcatctttgt tagaagttgg catggtttat gttgtataaa acttattaca
     2581 taactagatt gcatttgttc atatttaaag aagatcacaa gggattatca ctaaaaagtc
     2641 cattttttta accttatttg cgtgagagcc caaaaaataa
//
LOCUS       XM_071885930            1311 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable aspartic proteinase
            GIP2 (LOC139903995), mRNA.
ACCESSION   XM_071885930
VERSION     XM_071885930.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1311
                     /gene="LOC139903995"
                     /note="probable aspartic proteinase GIP2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139903995"
     CDS             1..1311
                     /gene="LOC139903995"
                     /codon_start=1
                     /product="probable aspartic proteinase GIP2"
                     /protein_id="XP_071742031.1"
                     /db_xref="GeneID:139903995"
                     /translation="MHFFLQLLVIILASFISHKHEAKAAYVPPYTSIVAPVTKHTDAA
                     KPLYSVEIMTTYVNMQYLHANFLIDIDAPFIWHDCILQWNPYPGSCPNNTLCTYPVSC
                     EEYQCTDVRTTYSYPNLPSCPPANNASTLPGWGYCTCPVNVVSPITTSCTQALLNYDD
                     FTVYTSNGRNVFTGAYGANPNAACAPSSTFASFPKNINGVMAFSSSPCALPAYLYQPL
                     KRSLALCLPSTLSSRGVLFFGSGPYYLLPQSDVDLRSYLSYTPLLKHPDSFGYFIGLK
                     SIVIRRRSIGLPTNITTKLSTIEPYTLLRTNIYNQVVRVFSFYTIGIPPANPVPLFSV
                     CYSTITRMILRLVPDIDLILSNGNKWTVSTANSMKQVTRDVACLAFVDGGVTPEHEIV
                     IGTFQFEDNFLEFNLENSSLGFSSSLLRRQTSCSNFNFTLTNSY"
     misc_feature    190..1227
                     /gene="LOC139903995"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(205..207,211..213,217..219,424..432,598..600)
                     /gene="LOC139903995"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    205..213
                     /gene="LOC139903995"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    205..207
                     /gene="LOC139903995"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(424..435,451..462)
                     /gene="LOC139903995"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgcattttt ttctacaact acttgttatc attctagcca gcttcatctc tcataaacat
       61 gaagctaaag cagcttatgt tccaccatac acttccatcg tagctcctgt taccaaacat
      121 accgatgccg ctaagccact ctatagcgtt gaaatcatga caacatacgt aaacatgcaa
      181 tacttgcacg caaacttcct tatagacatc gatgcgccat tcatatggca cgactgcatc
      241 cttcaatgga acccgtaccc cggaagttgt cctaacaaca cactttgcac ctatccggtt
      301 tcttgtgaag aataccagtg caccgatgtt cgaacaactt actcgtatcc aaacttacct
      361 tcttgtccac cggcgaacaa cgcttcaacg ttacctggtt ggggatactg cacgtgtcca
      421 gtcaacgtgg tcagcccgat cacaacatca tgtactcaag ccctactaaa ctacgatgat
      481 ttcacggtct atacaagtaa cggtagaaat gttttcactg gcgcatatgg tgcaaaccct
      541 aacgccgcat gtgctccttc ttcaacattt gcatcattcc ctaaaaacat taacggtgtc
      601 atggcctttt cgtcctcacc ttgcgcgtta ccagcgtatt tatatcaacc gcttaaaaga
      661 tcgttagctt tatgtttgcc tagcactttg tcctctcgcg gggttctgtt tttcggatct
      721 ggtccttatt atcttcttcc tcaatcggac gttgatctaa gaagttatct ttcgtatact
      781 ccgttactaa agcatccaga ttcttttgga tactttatcg gtctcaaaag cattgtaatt
      841 agacgaagat ctatcggtct acctactaat atcactacaa agcttagtac aatcgagcct
      901 tatacacttc ttagaaccaa tatatacaat caagtagtta gggttttttc gttctataca
      961 ataggaattc ctcctgcgaa tccagtacca cttttttctg tttgttatag tacgattact
     1021 cgaatgattt taaggctcgt tcctgatatt gatttgattc tttcgaatgg gaacaagtgg
     1081 actgtatcca cggctaactc catgaagcaa gtgacacgtg acgtggcgtg tttagcgttt
     1141 gttgatggtg gtgtgacacc agaacatgag atcgtgattg ggacgtttca gtttgaggat
     1201 aactttctgg agttcaattt agagaattcg agtttggggt ttagttcttc attgctacgt
     1261 aggcagactt cttgctcaaa cttcaacttt actctcacga atagttattg a
//
LOCUS       XR_011778616            3511 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903996), transcript variant X1, ncRNA.
ACCESSION   XR_011778616
VERSION     XR_011778616.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3511
                     /gene="LOC139903996"
                     /note="uncharacterized LOC139903996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903996"
     ncRNA           1..3511
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903996"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139903996"
ORIGIN      
        1 acaatcaaaa cccaaaaccc taggggaatg atttcccgcc cttttactct cgtaatctgc
       61 tacatcgccg gtgccgaatg gtctccccta agcgatttct ttccaccgtt gagggcacgc
      121 tattaagctc cacttctcct tcgccttcgc agaagattca aatccttcac actattcgcc
      181 tctcctgtat ttttccggta tgttggaaac tgtcatatga ttgttgttta actattgcga
      241 ataatatgaa gaatgatcag ccaaatctat ccagaaaaga gtgagctctg gacaaggggg
      301 caaatcttga tcgtggattg acatgtaaaa actaatttta gttggtgttt tttttactgg
      361 agaataatac caaggttttt ttcaacacaa actataatta acttaatcct tgtgtttgca
      421 attcaagggg tgcatttgta gaaagacgag cagttgtttg taagtagaga ctaatacatg
      481 gtcactgtcc tgttttatca ctatacgttg cacgtgcaat caagctgctt aataaagtag
      541 aactttatgc tctttcagtt gattttcttg tttcttttgc ttcaattgtt tatttgtttg
      601 tatctttcat tcttttaatg acattaacta acctggtgag ctaattaatt gataagggaa
      661 cccctcgtta ttcttattgt tgtaatttca tttgcaagaa cataagtttt gattgctcga
      721 gcgcttcact ttgaggaaaa agatggtgca ggggacatca gtggcagtac gggcattgtg
      781 gcaaagcagg atgcttcatt taggcacgaa ttccatgaaa ctgtatgtta catcttcatc
      841 gggattggta tgtagattgg ttttgataaa cattgagttg cagtgactaa taattcttca
      901 ggaagccacc gaagcagcct tctgacagag cgcaagttca gtcaatgcag aaacccgtat
      961 aatctcattc agcatcaagt atccttggtt gtggtccctg tgatacttag tgcgggtccg
     1021 tgtttctata gccttttgat ttattcatga aaagatgcat taaacatgga tgcagagttt
     1081 tggatacatg ccagaaagag ttgaaggcca gaatgcagct tttgaatatc tttggatata
     1141 agtagacatc gcatgacatg ctctattaca attaatgggc tgcctgcctt ccttggctgc
     1201 ttgacatgaa cccattgatc ttgcaaagtg gttaagttca agtttaagca ctcacataga
     1261 tgttttcgtt gaaattttgt agcggatata catgcattga tcaggtattt actcttcttt
     1321 tttctcttgt caaacgggaa ctgatttgtg aaaaaaaata tgttttttga tgattatgca
     1381 ttagttcttg cgtgaaggat caacatattc ttgggccaat gtttcatact ttcatgtcgt
     1441 ggtctgaaat tctctttttt tgctcctact tctttagtgg gctgaataat tataagttag
     1501 ctttttgtaa taaaagaact ttgttgtgtt tgttgggttt cccactttat gaccacttgt
     1561 gactgatttt tttctcttct gttatgcttg gataagaatt ttcttgggct attctagatt
     1621 catgttagtg tattattatg taatgatcca gttccgtaat tgaagatggt aagtttaaga
     1681 ttgcagaggg taaaacaaat taagcaatta gggagatatt ttcattgagg ttattagtaa
     1741 caattgttag actttctgtg atgaggtaat tataagaact aaaaaggaag attcatgtaa
     1801 tatattttcc gtcattagat gtttttgttc gcaaatcatg tttgtacttg atatctgtga
     1861 atattcttga aaggatgttt catgcaattc atacatactc ctgggaagac aaatagaaag
     1921 actttacttg gagactaaac agctttcgga taatctagag aaacagactg gaagctgatt
     1981 attgctgaac cataaaatga gaagcccagg gtagtttaat agacattcga ttatcagata
     2041 ggtctaatta ttttatgctt ggataagaac ataacattct tgaacttttc taagttcatc
     2101 tttctgtatg atgttgattg tgtaggctgt gtccgtgttt gcagatggtt atatcttctt
     2161 cattttttta tgcaacttac cttactcaga atccagtttt tgtttttgca gatggtaaag
     2221 cttaaatttg cagaggataa aggaaaaatt aagcaataag agatattttt gttgaggtag
     2281 ttgtaacatc tgttggaaat ttaatgacga gggacttttt gtagaaatat ttgaccgttg
     2341 atgcttttca agaaaatctg tgttttgtgg taaacccgat caaggaaaaa agacaacaag
     2401 tcaaacttcg agtagaggat ggtttaggca gaattttcta gtcttattaa tgcaggttag
     2461 tacctactta attctctctt tgttcagagt cattttatgt tcttttgatg cgatgtggtg
     2521 tttgttgatt atgcattaag ttttcgtgtg aagatcaacg tattcttggg tcaatgcagg
     2581 tcaatcagtt tttgctccta cttctttagt ggactgaatt tcaagttagc tttcgcgtta
     2641 taaaataacc attttcaggc ttttttttgt taattatttc ttatatttct tcataggact
     2701 gttgggtttc tcactctagc gtattatgtt gattgtgtac ttgaattcac tcccaagatg
     2761 agaagcctga gttagtaaaa gattattttc tgttattctc tctaaacttc aaattgggag
     2821 gctaaagctg attttcttca attggagatc acagactaaa atactacgga gtttaaaggg
     2881 aatgatgcaa atgttgaaga aggagcacat gcggcgttag ggtttgcacc atatgcgcca
     2941 gtgaaaacat ttctaccgtt acttgtatag accgtgaaat catcgtagtt tagtagggct
     3001 tgagtacatg atgttgtgat cgggctgacc acgttgactg gacacgtgca gtatccccaa
     3061 ccaggtaacg ttgaagcgtt gttcgccggt ggacaagaag gtaagtttgg atacgagtaa
     3121 gttgttcgaa catcggtgca ctggtattct tcacaagaaa ccggataggt gcaaagtgtg
     3181 ttgttaggac aacttccggg gtacgggttc cattgaagga tgcagtcgtg ccatatgaat
     3241 ggcgcatcga tgtctataag gaagtttgcg tgcaagtatt gcatgtttac gtatgttgtc
     3301 atgatttcaa cgctatagag tggcttagcg gcatcggtat gtttggtaac aggagctacg
     3361 atggaagtgt atggtggaac ataagctgct ttagcttcat gtttatgaga gatgaagctg
     3421 gctagaatga taacaagtag ttgtagaaaa aaatgcattt gaaagtttct gggatttgtt
     3481 attttttgtt tctgttcaaa acttcaaatg g
//
LOCUS       XR_011778617            3387 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903996), transcript variant X2, ncRNA.
ACCESSION   XR_011778617
VERSION     XR_011778617.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3387
                     /gene="LOC139903996"
                     /note="uncharacterized LOC139903996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903996"
     ncRNA           1..3387
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903996"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139903996"
ORIGIN      
        1 acaatcaaaa cccaaaaccc taggggaatg atttcccgcc cttttactct cgtaatctgc
       61 tacatcgccg gtgccgaatg gtctccccta agcgatttct ttccaccgtt gagggcacgc
      121 tattaagctc cacttctcct tcgccttcgc agaagattca aatccttcac actattcgcc
      181 tctcctgtat ttttccggta tgttggaaac tgtcatatga ttgttgttta actattgcga
      241 ataatatgaa gaatgatcag ccaaatctat ccagaaaaga gtgagctctg gacaaggggg
      301 caaatcttga tcgtggattg acatgtaaaa actaatttta gttggtgttt tttttactgg
      361 agaataatac caaggttttt ttcaacacaa actataatta acttaatcct tgtgtttgca
      421 attcaagggg tgcatttgta gaaagacgag cagttgtttg taagtagaga ctaatacatg
      481 gtcactgtcc tgttttatca ctatacgttg cacgtgcaat caagctgctt aataaagtag
      541 aactttatgc tctttcagtt gattttcttg tttcttttgc ttcaattgtt tatttgtttg
      601 tatctttcat tcttttaatg acattaacta acctggtgag ctaattaatt gataagggaa
      661 cccctcgtta ttcttattgt tgtaatttca tttgcaagaa cataagtttt gattgctcga
      721 gcgcttcact ttgaggaaaa agatggtgca ggggacatca gtggcagtac gggcattgtg
      781 gcaaagcagg atgcttcatt taggcacgaa ttccatgaaa ctgtatgtta catcttcatc
      841 gggattggta tgtagattgg ttttgataaa cattgagttg cagtgactaa taattcttca
      901 ggaagccacc gaagcagcct tctgacagag cgcaagttca gtcaatgcag aaacccgtat
      961 aatctcattc agcatcaagt atccttggtt gtggtccctg tgatacttag tgcgggtccg
     1021 tgtttctata gccttttgat ttattcatga aaagatgcat taaacatgga tgcagagttt
     1081 tggatacatg ccagaaagag ttgaaggcca gaatgcagct tttgaatatc tttggatata
     1141 agtagacatc gcatgacatg ctctattaca attaatgggc tgcctgcctt ccttggctgc
     1201 ttgacatgaa cccattgatc ttgcaaagtg gttaagttca agtttaagca ctcacataga
     1261 tgttttcgtt gaaattttgt agcggatata catgcattga tcaggtattt actcttcttt
     1321 tttctcttgt caaacgggaa ctgatttgtg aaaaaaaata tgttttttga tgattatgca
     1381 ttagttcttg cgtgaaggat caacatattc ttgggccaat gtttcatact ttcatgtcgt
     1441 ggtctgaaat tctctttttt tgctcctact tctttagtgg gctgaataat tataagttag
     1501 ctttttgtaa taaaagaact ttgttgtgtt tgttgggttt cccactttat gaccacttgt
     1561 gactgatttt tttctcttct gttatgcttg gataagaatt ttcttgggct attctagatt
     1621 catgttagtg tattattatg taatgatcca gttccgtaat tgaagatggt aagtttaaga
     1681 ttgcagaggg taaaacaaat taagcaatta gggagatatt ttcattgagg ttattagtaa
     1741 caattgttag actttctgtg atgaggtaat tataagaact aaaaaggaag attcatgtaa
     1801 tatattttcc gtcattagat gtttttgttc gcaaatcatg tttgtacttg atatctgtga
     1861 atattcttga aaggatgttt catgcaattc atacatactc ctgggaagac aaatagaaag
     1921 actttacttg gagactaaac agctttcgga taatctagag aaacagactg gaagctgatt
     1981 attgctgaac cataaaatga gaagcccagg gtagtttaat agacattcga ttatcagata
     2041 ggtctaatta ttttatgctt ggataagaac ataacattct tgaacttttc taagttcatc
     2101 tttctgtatg atgttgattg tgtaggctgt gtccgtgttt gcagatggtt atatcttctt
     2161 cattttttta tgcaacttac cttactcaga atccagtttt tgtttttgca gatggtaaag
     2221 cttaaatttg cagaggataa aggaaaaatt aagcaataag agatattttt gttgaggtag
     2281 ttgtaacatc tgttggaaat ttaatgacga gggacttttt gtagaaatat ttgaccgttg
     2341 atgcttttca agaaaatctg tgttttgtgg taaacccgat caaggaaaaa agacaacaag
     2401 tcaaacttcg agtagaggat ggtttaggca gaattttcta gtcttattaa tgcaggtcaa
     2461 tcagtttttg ctcctacttc tttagtggac tgaatttcaa gttagctttc gcgttataaa
     2521 ataaccattt tcaggctttt ttttgttaat tatttcttat atttcttcat aggactgttg
     2581 ggtttctcac tctagcgtat tatgttgatt gtgtacttga attcactccc aagatgagaa
     2641 gcctgagtta gtaaaagatt attttctgtt attctctcta aacttcaaat tgggaggcta
     2701 aagctgattt tcttcaattg gagatcacag actaaaatac tacggagttt aaagggaatg
     2761 atgcaaatgt tgaagaagga gcacatgcgg cgttagggtt tgcaccatat gcgccagtga
     2821 aaacatttct accgttactt gtatagaccg tgaaatcatc gtagtttagt agggcttgag
     2881 tacatgatgt tgtgatcggg ctgaccacgt tgactggaca cgtgcagtat ccccaaccag
     2941 gtaacgttga agcgttgttc gccggtggac aagaaggtaa gtttggatac gagtaagttg
     3001 ttcgaacatc ggtgcactgg tattcttcac aagaaaccgg ataggtgcaa agtgtgttgt
     3061 taggacaact tccggggtac gggttccatt gaaggatgca gtcgtgccat atgaatggcg
     3121 catcgatgtc tataaggaag tttgcgtgca agtattgcat gtttacgtat gttgtcatga
     3181 tttcaacgct atagagtggc ttagcggcat cggtatgttt ggtaacagga gctacgatgg
     3241 aagtgtatgg tggaacataa gctgctttag cttcatgttt atgagagatg aagctggcta
     3301 gaatgataac aagtagttgt agaaaaaaat gcatttgaaa gtttctggga tttgttattt
     3361 tttgtttctg ttcaaaactt caaatgg
//
LOCUS       XR_011778618            3341 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903996), transcript variant X3, ncRNA.
ACCESSION   XR_011778618
VERSION     XR_011778618.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3341
                     /gene="LOC139903996"
                     /note="uncharacterized LOC139903996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903996"
     ncRNA           1..3341
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903996"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139903996"
ORIGIN      
        1 acaatcaaaa cccaaaaccc taggggaatg atttcccgcc cttttactct cgtaatctgc
       61 tacatcgccg gtgccgaatg gtctccccta agcgatttct ttccaccgtt gagggcacgc
      121 tattaagctc cacttctcct tcgccttcgc agaagattca aatccttcac actattcgcc
      181 tctcctgtat ttttccggta tgttggaaac tgtcatatga ttgttgttta actattgcga
      241 ataatatgaa gaatgatcag ccaaatctat ccagaaaaga gtgagctctg gacaaggggg
      301 caaatcttga tcgtggattg acatgtaaaa actaatttta gttggtgttt tttttactgg
      361 agaataatac caaggttttt ttcaacacaa actataatta acttaatcct tgtgtttgca
      421 attcaagggg tgcatttgta gaaagacgag cagttgtttg taagtagaga ctaatacatg
      481 gtcactgtcc tgttttatca ctatacgttg cacgtgcaat caagctgctt aataaatttt
      541 gattgctcga gcgcttcact ttgaggaaaa agatggtgca ggggacatca gtggcagtac
      601 gggcattgtg gcaaagcagg atgcttcatt taggcacgaa ttccatgaaa ctgtatgtta
      661 catcttcatc gggattggta tgtagattgg ttttgataaa cattgagttg cagtgactaa
      721 taattcttca ggaagccacc gaagcagcct tctgacagag cgcaagttca gtcaatgcag
      781 aaacccgtat aatctcattc agcatcaagt atccttggtt gtggtccctg tgatacttag
      841 tgcgggtccg tgtttctata gccttttgat ttattcatga aaagatgcat taaacatgga
      901 tgcagagttt tggatacatg ccagaaagag ttgaaggcca gaatgcagct tttgaatatc
      961 tttggatata agtagacatc gcatgacatg ctctattaca attaatgggc tgcctgcctt
     1021 ccttggctgc ttgacatgaa cccattgatc ttgcaaagtg gttaagttca agtttaagca
     1081 ctcacataga tgttttcgtt gaaattttgt agcggatata catgcattga tcaggtattt
     1141 actcttcttt tttctcttgt caaacgggaa ctgatttgtg aaaaaaaata tgttttttga
     1201 tgattatgca ttagttcttg cgtgaaggat caacatattc ttgggccaat gtttcatact
     1261 ttcatgtcgt ggtctgaaat tctctttttt tgctcctact tctttagtgg gctgaataat
     1321 tataagttag ctttttgtaa taaaagaact ttgttgtgtt tgttgggttt cccactttat
     1381 gaccacttgt gactgatttt tttctcttct gttatgcttg gataagaatt ttcttgggct
     1441 attctagatt catgttagtg tattattatg taatgatcca gttccgtaat tgaagatggt
     1501 aagtttaaga ttgcagaggg taaaacaaat taagcaatta gggagatatt ttcattgagg
     1561 ttattagtaa caattgttag actttctgtg atgaggtaat tataagaact aaaaaggaag
     1621 attcatgtaa tatattttcc gtcattagat gtttttgttc gcaaatcatg tttgtacttg
     1681 atatctgtga atattcttga aaggatgttt catgcaattc atacatactc ctgggaagac
     1741 aaatagaaag actttacttg gagactaaac agctttcgga taatctagag aaacagactg
     1801 gaagctgatt attgctgaac cataaaatga gaagcccagg gtagtttaat agacattcga
     1861 ttatcagata ggtctaatta ttttatgctt ggataagaac ataacattct tgaacttttc
     1921 taagttcatc tttctgtatg atgttgattg tgtaggctgt gtccgtgttt gcagatggtt
     1981 atatcttctt cattttttta tgcaacttac cttactcaga atccagtttt tgtttttgca
     2041 gatggtaaag cttaaatttg cagaggataa aggaaaaatt aagcaataag agatattttt
     2101 gttgaggtag ttgtaacatc tgttggaaat ttaatgacga gggacttttt gtagaaatat
     2161 ttgaccgttg atgcttttca agaaaatctg tgttttgtgg taaacccgat caaggaaaaa
     2221 agacaacaag tcaaacttcg agtagaggat ggtttaggca gaattttcta gtcttattaa
     2281 tgcaggttag tacctactta attctctctt tgttcagagt cattttatgt tcttttgatg
     2341 cgatgtggtg tttgttgatt atgcattaag ttttcgtgtg aagatcaacg tattcttggg
     2401 tcaatgcagg tcaatcagtt tttgctccta cttctttagt ggactgaatt tcaagttagc
     2461 tttcgcgtta taaaataacc attttcaggc ttttttttgt taattatttc ttatatttct
     2521 tcataggact gttgggtttc tcactctagc gtattatgtt gattgtgtac ttgaattcac
     2581 tcccaagatg agaagcctga gttagtaaaa gattattttc tgttattctc tctaaacttc
     2641 aaattgggag gctaaagctg attttcttca attggagatc acagactaaa atactacgga
     2701 gtttaaaggg aatgatgcaa atgttgaaga aggagcacat gcggcgttag ggtttgcacc
     2761 atatgcgcca gtgaaaacat ttctaccgtt acttgtatag accgtgaaat catcgtagtt
     2821 tagtagggct tgagtacatg atgttgtgat cgggctgacc acgttgactg gacacgtgca
     2881 gtatccccaa ccaggtaacg ttgaagcgtt gttcgccggt ggacaagaag gtaagtttgg
     2941 atacgagtaa gttgttcgaa catcggtgca ctggtattct tcacaagaaa ccggataggt
     3001 gcaaagtgtg ttgttaggac aacttccggg gtacgggttc cattgaagga tgcagtcgtg
     3061 ccatatgaat ggcgcatcga tgtctataag gaagtttgcg tgcaagtatt gcatgtttac
     3121 gtatgttgtc atgatttcaa cgctatagag tggcttagcg gcatcggtat gtttggtaac
     3181 aggagctacg atggaagtgt atggtggaac ataagctgct ttagcttcat gtttatgaga
     3241 gatgaagctg gctagaatga taacaagtag ttgtagaaaa aaatgcattt gaaagtttct
     3301 gggatttgtt attttttgtt tctgttcaaa acttcaaatg g
//
LOCUS       XR_011778619            3612 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903996), transcript variant X4, ncRNA.
ACCESSION   XR_011778619
VERSION     XR_011778619.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3612
                     /gene="LOC139903996"
                     /note="uncharacterized LOC139903996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903996"
     ncRNA           1..3612
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903996"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139903996"
ORIGIN      
        1 acaatcaaaa cccaaaaccc taggggaatg atttcccgcc cttttactct cgtaatctgc
       61 tacatcgccg gtgccgaatg gtctccccta agcgatttct ttccaccgtt gagggcacgc
      121 tattaagctc cacttctcct tcgccttcgc agaagattca aatccttcac actattcgcc
      181 tctcctgtat ttttccggta tgttggaaac tgtcatatga ttgttgttta actattgcga
      241 ataatatgaa gaatgatcag ccaaatctat ccagaaaaga gtgagctctg gacaaggggg
      301 caaatcttga tcgtggattg acatgtaaaa actaatttta gttggtgttt tttttactgg
      361 agaataatac caaggttttt ttcaacacaa actataatta acttaatcct tgtgtttgca
      421 attcaagggg tgcatttgta gaaagacgag cagttgtttg taagtagaga ctaatacatg
      481 gtcactgtcc tgttttatca ctatacgttg cacgtgcaat caagctgctt aataaagtag
      541 aactttatgc tctttcagtt gattttcttg tttcttttgc ttcaattgtt tatttgtttg
      601 tatctttcat tcttttaatg acattaacta acctggtgag ctaattaatt gataagggaa
      661 cccctcgtta ttcttattgt tgtaatttca tttgcaagaa cataagtttt gattgctcga
      721 gcgcttcact ttgaggaaaa agatggtgca ggggacatca gtggcagtac gggcattgtg
      781 gcaaagcagg atgcttcatt taggcacgaa ttccatgaaa ctgtatgtta catcttcatc
      841 gggattggta tgtagattgg ttttgataaa cattgagttg cagtgactaa taattcttca
      901 ggaagccacc gaagcagcct tctgacagag cgcaagttca gtcaatgcag aaacccgtat
      961 aatctcattc agcatcaagt atccttggtt gtggtccctg tgatacttag tgcgggtccg
     1021 tgtttctata gccttttgat ttattcatga aaagatgcat taaacatgga tgcagagttt
     1081 tggatacatg ccagaaagag ttgaaggcca gaatgcagct tttgaatatc tttggatata
     1141 agtagacatc gcatgacatg ctctattaca attaatgggc tgcctgcctt ccttggctgc
     1201 ttgacatgaa cccattgatc ttgcaaagtg gttaagttca agtttaagca ctcacataga
     1261 tgttttcgtt gaaattttgt agcggatata catgcattga tcaggtattt actcttcttt
     1321 tttctcttgt caaacgggaa ctgatttgtg aaaaaaaata tgttttttga tgattatgca
     1381 ttagttcttg cgtgaaggat caacatattc ttgggccaat gtttcatact ttcatgtcgt
     1441 ggtctgaaat tctctttttt tgctcctact tctttagtgg gctgaataat tataagttag
     1501 ctttttgtaa taaaagaact ttgttgtgtt tgttgggttt cccactttat gaccacttgt
     1561 gactgatttt tttctcttct gttatgcttg gataagaatt ttcttgggct attctagatt
     1621 catgttagtg tattattatg taatgatcca gttccgtaat tgaagatggt aagtttaaga
     1681 ttgcagaggg taaaacaaat taagcaatta gggagatatt ttcattgagg ttattagtaa
     1741 caattgttag actttctgtg atgaggtaat tataagaact aaaaaggaag attcatgtaa
     1801 tatattttcc gtcattagat gtttttgttc gcaaatcatg tttgtacttg atatctgtga
     1861 atattcttga aaggatgttt catgcaattc atacatactc ctgggaagac aaatagaaag
     1921 actttacttg gagactaaac agctttcgga taatctagag aaacagactg gaagctgatt
     1981 attgctgaac cataaaatga gaagcccagg gtagtttaat agacattcga ttatcagata
     2041 ggtctaatta ttttatgctt ggataagaac ataacattct tgaacttttc taagttcatc
     2101 tttctgtatg atgttgattg tgtaggctgt gtccgtgttt gcagatggtt atatcttctt
     2161 cattttttta tgcaacttac cttactcaga atccagtttt tgtttttgca gatggtaaag
     2221 cttaaatttg cagaggataa aggaaaaatt aagcaataag agatattttt gttgaggtag
     2281 ttgtaacatc tgttggaaat ttaatgacga gggacttttt gtagaaatat ttgaccgttg
     2341 atgcttttca agaaaatctg tgttttgtgg taaacccgat caaggaaaaa agacaacaag
     2401 tcaaacttcg agtagaggat ggtttaggca gaattttcta gtcttattaa tgcaggttag
     2461 tacctactta attctctctt tgttcagagt cattttatgt tcttttgatg cgatgtggtg
     2521 tttgttgatt atgcattaag ttttcgtgtg aagatcaacg tattcttggg tcaatgcagg
     2581 tcaatcagtt tttgctccta cttctttagt ggactgaatt tcaagttagc tttcgcgtta
     2641 taaaataacc attttcaggc ttttttttgt taattatttc ttatatttct tcataggact
     2701 gttgggtttc tcactctagc gtattatgtt gattgtgtac ttgaattcac tcccaagatg
     2761 agaagcctga gttagtaaaa gattattttc tgttattctc tctaaacttc aaattgggag
     2821 gctaaagctg attttcttca attggagatc acagactaaa atactacgga gtttaaagag
     2881 agaaggacaa aacgggatac aaatactcaa aagacatgac gaggcttgag ggcaataaga
     2941 cctttattaa cgcagcgtta tggctccgaa atcatcacca tcacgccatt atggcgccac
     3001 agtgcggtgt gatgggctgc aaaattcgtc ggcgcgatgg ccacatcacg ggaaggaaaa
     3061 atggcgtgag gatgacttcg accaatccta tgatgccatg tacctgatct gttttcatat
     3121 tagattataa atcaaaaata tcgaagttta attgcagaag aagatgagat ctttggtttt
     3181 tcaaatctac attcattcga tgaagaagaa gtctgaagag gttataaatt aaaagaaaac
     3241 tacactttaa gtccatatac ttgtagcgag tttacaaaat aatcacataa cttaccaaat
     3301 ataccatttg aacctttaga aaatataata ctccgtataa atataaacta aataataaca
     3361 aatcaaaata agctatttaa acctttaggg accaattatt atatatgtat tattaattta
     3421 aattattata tgtattattt ttataaaaaa tcaaacaagt aaaaatataa ctcaaataaa
     3481 aatgaaaaag aaaataaaaa tgtgggacaa attacccaat cacacaacca tcacgccata
     3541 ccattacaaa tttcatcacg ctatcacttt tgccaaatca ctactatacc acacaaatta
     3601 aaacaacccc at
//
LOCUS       XR_011778620            3527 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903996), transcript variant X5, ncRNA.
ACCESSION   XR_011778620
VERSION     XR_011778620.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3527
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3527
                     /gene="LOC139903996"
                     /note="uncharacterized LOC139903996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903996"
     ncRNA           1..3527
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903996"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139903996"
ORIGIN      
        1 acaatcaaaa cccaaaaccc taggggaatg atttcccgcc cttttactct cgtaatctgc
       61 tacatcgccg gtgccgaatg gtctccccta agcgatttct ttccaccgtt gagggcacgc
      121 tattaagctc cacttctcct tcgccttcgc agaagattca aatccttcac actattcgcc
      181 tctcctgtat ttttccggta tgttggaaac tgtcatatga ttgttgttta actattgcga
      241 ataatatgaa gaatgatcag ccaaatctat ccagaaaaga gtgagctctg gacaaggggg
      301 caaatcttga tcgtggattg acatgtaaaa actaatttta gttggtgttt tttttactgg
      361 agaataatac caaggttttt ttcaacacaa actataatta acttaatcct tgtgtttgca
      421 attcaagggg tgcatttgta gaaagacgag cagttgtttg taagtagaga ctaatacatg
      481 gtcactgtcc tgttttatca ctatacgttg cacgtgcaat caagctgctt aataaagtag
      541 aactttatgc tctttcagtt gattttcttg tttcttttgc ttcaattgtt tatttgtttg
      601 tatctttcat tcttttaatg acattaacta acctggtgag ctaattaatt gataagggaa
      661 cccctcgtta ttcttattgt tgtaatttca tttgcaagaa cataagtttt gattgctcga
      721 gcgcttcact ttgaggaaaa agatggtgca ggggacatca gtggcagtac gggcattgtg
      781 gcaaagcagg atgcttcatt taggcacgaa ttccatgaaa ctgtatgtta catcttcatc
      841 gggattggta tgtagattgg ttttgataaa cattgagttg cagtgactaa taattcttca
      901 ggaagccacc gaagcagcct tctgacagag cgcaagttca gtcaatgcag aaacccgtat
      961 aatctcattc agcatcaagt atccttggtt gtggtccctg tgatacttag tgcgggtccg
     1021 tgtttctata gccttttgat ttattcatga aaagatgcat taaacatgga tgcagagttt
     1081 tggatacatg ccagaaagag ttgaaggcca gaatgcagct tttgaatatc tttggatata
     1141 agtagacatc gcatgacatg ctctattaca attaatggta cctttatgtg ctaggctgcc
     1201 tgccttcctt ggctgcttga catgaaccca ttgatcttgc aaagtggtta agttcaagtt
     1261 taagcactca catagatgtt ttcgttgaaa ttttgtagcg gatatacatg cattgatcag
     1321 gtatttactc ttcttttttc tcttgtcaaa cgggaactga tttgtgaaaa aaaatatgtt
     1381 ttttgatgat tatgcattag ttcttgcgtg aaggatcaac atattcttgg gccaatgttt
     1441 catactttca tgtcgtggtc tgaaattctc tttttttgct cctacttctt tagtgggctg
     1501 aataattata agttagcttt ttgtaataaa agaactttgt tgtgtttgtt gggtttccca
     1561 ctttatgacc acttgtgact gatttttttc tcttctgtta tgcttggata agaattttct
     1621 tgggctattc tagattcatg ttagtgtatt attatgtaat gatccagttc cgtaattgaa
     1681 gatggtaagt ttaagattgc agagggtaaa acaaattaag caattaggga gatattttca
     1741 ttgaggttat tagtaacaat tgttagactt tctgtgatga ggtaattata agaactaaaa
     1801 aggaagattc atgtaatata ttttccgtca ttagatgttt ttgttcgcaa atcatgtttg
     1861 tacttgatat ctgtgaatat tcttgaaagg atgtttcatg caattcatac atactcctgg
     1921 gaagacaaat agaaagactt tacttggaga ctaaacagct ttcggataat ctagagaaac
     1981 agactggaag ctgattattg ctgaaccata aaatgagaag cccagggtag tttaatagac
     2041 attcgattat cagataggtc taattatttt atgcttggat aagaacataa cattcttgaa
     2101 cttttctaag ttcatctttc tgtatgatgt tgattgtgta ggctgtgtcc gtgtttgcag
     2161 atggttatat cttcttcatt tttttatgca acttacctta ctcagaatcc agtttttgtt
     2221 tttgcagatg gtaaagctta aatttgcaga ggataaagga aaaattaagc aataagagat
     2281 atttttgttg aggtagttgt aacatctgtt ggaaatttaa tgacgaggga ctttttgtag
     2341 aaatatttga ccgttgatgc ttttcaagaa aatctgtgtt ttgtggtaaa cccgatcaag
     2401 gaaaaaagac aacaagtcaa acttcgagta gaggatggtt taggcagaat tttctagtct
     2461 tattaatgca ggttagtacc tacttaattc tctctttgtt cagagtcatt ttatgttctt
     2521 ttgatgcgat gtggtgtttg ttgattatgc attaagtttt cgtgtgaaga tcaacgtatt
     2581 cttgggtcaa tgcaggtcaa tcagtttttg ctcctacttc tttagtggac tgaatttcaa
     2641 gttagctttc gcgttataaa ataaccattt tcaggctttt ttttgttaat tatttcttat
     2701 atttcttcat aggactgttg ggtttctcac tctagcgtat tatgttgatt gtgtacttga
     2761 attcactccc aagatgagaa gcctgagtta gtaaaagatt attttctgtt attctctcta
     2821 aacttcaaat tgggaggcta aagctgattt tcttcaattg gagatcacag actaaaatac
     2881 tacggagttt aaagggaatg atgcaaatgt tgaagaagga gcacatgcgg cgttagggtt
     2941 tgcaccatat gcgccagtga aaacatttct accgttactt gtatagaccg tgaaatcatc
     3001 gtagtttagt agggcttgag tacatgatgt tgtgatcggg ctgaccacgt tgactggaca
     3061 cgtgcagtat ccccaaccag gtaacgttga agcgttgttc gccggtggac aagaaggtaa
     3121 gtttggatac gagtaagttg ttcgaacatc ggtgcactgg tattcttcac aagaaaccgg
     3181 ataggtgcaa agtgtgttgt taggacaact tccggggtac gggttccatt gaaggatgca
     3241 gtcgtgccat atgaatggcg catcgatgtc tataaggaag tttgcgtgca agtattgcat
     3301 gtttacgtat gttgtcatga tttcaacgct atagagtggc ttagcggcat cggtatgttt
     3361 ggtaacagga gctacgatgg aagtgtatgg tggaacataa gctgctttag cttcatgttt
     3421 atgagagatg aagctggcta gaatgataac aagtagttgt agaaaaaaat gcatttgaaa
     3481 gtttctggga tttgttattt tttgtttctg ttcaaaactt caaatgg
//
LOCUS       XR_011778621            3374 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903996), transcript variant X6, ncRNA.
ACCESSION   XR_011778621
VERSION     XR_011778621.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3374
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3374
                     /gene="LOC139903996"
                     /note="uncharacterized LOC139903996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903996"
     ncRNA           1..3374
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903996"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139903996"
ORIGIN      
        1 acaatcaaaa cccaaaaccc taggggaatg atttcccgcc cttttactct cgtaatctgc
       61 tacatcgccg gtgccgaatg gtctccccta agcgatttct ttccaccgtt gagggcacgc
      121 tattaagctc cacttctcct tcgccttcgc agaagattca aatccttcac actattcgcc
      181 tctcctgtat ttttccggta tgttggaaac tgtcatatga ttgttgttta actattgcga
      241 ataatatgaa gaatgatcag ccaaatctat ccagaaaaga gtgagctctg gacaaggggg
      301 caaatcttga tcgtggattg acatgtaaaa actaatttta gttggtgttt tttttactgg
      361 agaataatac caaggttttt ttcaacacaa actataatta acttaatcct tgtgtttgca
      421 attcaagggg tgcatttgta gaaagacgag cagttgtttg taagtagaga ctaatacatg
      481 gtcactgtcc tgttttatca ctatacgttg cacgtgcaat caagctgctt aataaagtag
      541 aactttatgc tctttcagtt gattttcttg tttcttttgc ttcaattgtt tatttgtttg
      601 tatctttcat tcttttaatg acattaacta acctggtgag ctaattaatt gataagggaa
      661 cccctcgtta ttcttattgt tgtaatttca tttgcaagaa cataagtttt gattgctcga
      721 gcgcttcact ttgaggaaaa agatggtgca ggggacatca gtggcagtac gggcattgtg
      781 gcaaagcagg atgcttcatt taggcacgaa ttccatgaaa ctgtatgtta catcttcatc
      841 gggattggta tgtagattgg ttttgataaa cattgagttg cagtgactaa taattcttca
      901 ggaagccacc gaagcagcct tctgacagag cgcaagttca gtcaatgcag aaacccgtat
      961 aatctcattc agcatcaagt atccttggtt gtggtccctg tgatacttag tgcgggtccg
     1021 tgtttctata gccttttgat ttattcatga aaagatgcat taaacatgga tgcagagttt
     1081 tggatacatg ccagaaagag ttgaaggcca gaatgcagct tttgaatatc tttggatata
     1141 agtagacatc gcatgacatg ctctattaca attaatgggc tgcctgcctt ccttggctgc
     1201 ttgacatgaa cccattgatc ttgcaaagtg gttaagttca agtttaagca ctcacataga
     1261 tgttttcgtt gaaattttgt agcggatata catgcattga tcaggtattt actcttcttt
     1321 tttctcttgt caaacgggaa ctgatttgtg aaaaaaaata tgttttttga tgattatgca
     1381 ttagttcttg cgtgaaggat caacatattc ttgggccaat gtttcatact ttcatgtcgt
     1441 ggtctgaaat tctctttttt tgctcctact tctttagtgg gctgaataat tataagttag
     1501 ctttttgtaa taaaagaact ttgttgtgtt tgttgggttt cccactttat gaccacttgt
     1561 gactgatttt tttctcttct gttatgcttg gataagaatt ttcttgggct attctagatt
     1621 catgttagtg tattattatg taatgatcca gttccgtaat tgaagatggt aagtttaaga
     1681 ttgcagaggg taaaacaaat taagcaatta gggagatatt ttcattgagg ttattagtaa
     1741 caattgttag actttctgtg atgaggtaat tataagaact aaaaaggaag attcatgtaa
     1801 tatattttcc gtcattagat gtttttgttc gcaaatcatg tttgtacttg atatctgtga
     1861 atattcttga aaggatgttt catgcaattc atacatactc ctgggaagac aaatagaaag
     1921 actttacttg gagactaaac agctttcgga taatctagag aaacagactg gaagctgatt
     1981 attgctgaac cataaaatga gaagcccagg gtagtttaat agacattcga ttatcagata
     2041 ggtctaatta ttttatgctt ggataagaac ataacattct tgaacttttc taagttcatc
     2101 tttctgtatg atgttgattg tgtaggctgt gtccgtgttt gcagatggtt atatcttctt
     2161 cattttttta tgcaacttac cttactcaga atccagtttt tgtttttgca gatggtaaag
     2221 cttaaatttg cagaggataa aggaaaaatt aagcaataag agatattttt gttgaggtag
     2281 ttgtaacatc tgttggaaat ttaatgacga gaaatatttg accgttgatg cttttcaaga
     2341 aaatctgtgt tttgtggtaa acccgatcaa ggaaaaaaga caacaagtca aacttcgagt
     2401 agaggatggt ttaggcagaa ttttctagtc ttattaatgc aggtcaatca gtttttgctc
     2461 ctacttcttt agtggactga atttcaagtt agctttcgcg ttataaaata accattttca
     2521 ggcttttttt tgttaattat ttcttatatt tcttcatagg actgttgggt ttctcactct
     2581 agcgtattat gttgattgtg tacttgaatt cactcccaag atgagaagcc tgagttagta
     2641 aaagattatt ttctgttatt ctctctaaac ttcaaattgg gaggctaaag ctgattttct
     2701 tcaattggag atcacagact aaaatactac ggagtttaaa gggaatgatg caaatgttga
     2761 agaaggagca catgcggcgt tagggtttgc accatatgcg ccagtgaaaa catttctacc
     2821 gttacttgta tagaccgtga aatcatcgta gtttagtagg gcttgagtac atgatgttgt
     2881 gatcgggctg accacgttga ctggacacgt gcagtatccc caaccaggta acgttgaagc
     2941 gttgttcgcc ggtggacaag aaggtaagtt tggatacgag taagttgttc gaacatcggt
     3001 gcactggtat tcttcacaag aaaccggata ggtgcaaagt gtgttgttag gacaacttcc
     3061 ggggtacggg ttccattgaa ggatgcagtc gtgccatatg aatggcgcat cgatgtctat
     3121 aaggaagttt gcgtgcaagt attgcatgtt tacgtatgtt gtcatgattt caacgctata
     3181 gagtggctta gcggcatcgg tatgtttggt aacaggagct acgatggaag tgtatggtgg
     3241 aacataagct gctttagctt catgtttatg agagatgaag ctggctagaa tgataacaag
     3301 tagttgtaga aaaaaatgca tttgaaagtt tctgggattt gttatttttt gtttctgttc
     3361 aaaacttcaa atgg
//
LOCUS       XR_011778622            3338 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139903996), transcript variant X7, ncRNA.
ACCESSION   XR_011778622
VERSION     XR_011778622.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3338
                     /gene="LOC139903996"
                     /note="uncharacterized LOC139903996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139903996"
     ncRNA           1..3338
                     /ncRNA_class="lncRNA"
                     /gene="LOC139903996"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139903996"
ORIGIN      
        1 acaatcaaaa cccaaaaccc taggggaatg atttcccgcc cttttactct cgtaatctgc
       61 tacatcgccg gtgccgaatg gtctccccta agcgatttct ttccaccgtt gagggcacgc
      121 tattaagctc cacttctcct tcgccttcgc agaagattca aatccttcac actattcgcc
      181 tctcctgtat ttttccggta tgttggaaac tgtcatatga ttgttgttta actattgcga
      241 ataatatgaa gaatgatcag ccaaatctat ccagaaaaga gtgagctctg gacaaggggg
      301 caaatcttga tcgtggattg acatgtaaaa actaatttta gttggtgttt tttttactgg
      361 agaataatac caaggttttt ttcaacacaa actataatta acttaatcct tgtgtttgca
      421 attcaagggg tgcatttgta gaaagacgag cagttgtttg taagtagaga ctaatacatg
      481 gtcactgtcc tgttttatca ctatacgttg cacgtgcaat caagctgctt aataaagtag
      541 aactttatgc tctttcagtt gattttcttg tttcttttgc ttcaattgtt tatttgtttg
      601 tatctttcat tcttttaatg acattaacta acctggtgag ctaattaatt gataagggaa
      661 cccctcgtta ttcttattgt tgtaatttca tttgcaagaa cataagtttt gattgctcga
      721 gcgcttcact ttgaggaaaa agatggtgca ggggacatca gtggcagtac gggcattgtg
      781 gcaaagcagg atgcttcatt taggcacgaa ttccatgaaa ctgtatgtta catcttcatc
      841 gggattggta tgtagattgg ttttgataaa cattgagttg cagtgactaa taattcttca
      901 ggaagccacc gaagcagcct tctgacagag cgcaagttca gtcaatgcag aaacccgtat
      961 aatctcattc agcatcaagt atccttggtt gtggtccctg tgatacttag tgcgggtccg
     1021 tgtttctata gccttttgat ttattcatga aaagatgcat taaacatgga tgcagagttt
     1081 tggatacatg ccagaaagag ttgaaggcca gaatgcagct tttgaatatc tttggatata
     1141 agtagacatc gcatgacatg ctctattaca attaatgggc tgcctgcctt ccttggctgc
     1201 ttgacatgaa cccattgatc ttgcaaagtg gttaagttca agtttaagca ctcacataga
     1261 tgttttcgtt gaaattttgt agcggatata catgcattga tcaggtattt actcttcttt
     1321 tttctcttgt caaacgggaa ctgatttgtg aaaaaaaata tgttttttga tgattatgca
     1381 ttagttcttg cgtgaaggat caacatattc ttgggccaat gtttcatact ttcatgtcgt
     1441 ggtctgaaat tctctttttt tgctcctact tctttagtgg gctgaataat tataagttag
     1501 ctttttgtaa taaaagaact ttgttgtgtt tgttgggttt cccactttat gaccacttgt
     1561 gactgatttt tttctcttct gttatgcttg gataagaatt ttcttgggct attctagatt
     1621 catgttagtg tattattatg taatgatcca gttccgtaat tgaagatggt aagtttaaga
     1681 ttgcagaggg taaaacaaat taagcaatta gggagatatt ttcattgagg ttattagtaa
     1741 caattgttag actttctgtg atgaggtaat tataagaact aaaaaggaag attcatgtaa
     1801 tatattttcc gtcattagat gtttttgttc gcaaatcatg tttgtacttg atatctgtga
     1861 atattcttga aaggatgttt catgcaattc atacatactc ctgggaagac aaatagaaag
     1921 actttacttg gagactaaac agctttcgga taatctagag aaacagactg gaagctgatt
     1981 attgctgaac cataaaatga gaagcccagg gtagtttaat agacattcga ttatcagata
     2041 ggtctaatta ttttatgctt ggataagaac ataacattct tgaacttttc taagttcatc
     2101 tttctgtatg atgttgattg tgtaggctgt gtccgtgttt gcagatggtt atatcttctt
     2161 cattttttta tgcaacttac cttactcaga atccagtttt tgtttttgca gatggtaaag
     2221 cttaaatttg cagaggataa aggaaaaatt aagcaataag agatattttt gttgaggtag
     2281 ttgtaacatc tgttggaaat ttaatgacga gggacttttt gtagaaatat ttgaccgttg
     2341 atgcttttca agaaaatctg tgttttgtgg taaacccgat caaggaaaaa agacaacaag
     2401 tcaaacttcg agtagaggat ggtttaggca gaattttcta gtcttattaa tgcaggttag
     2461 tacctactta attctctctt tgttcagagt cattttatgt tcttttgatg cgatgtggtg
     2521 tttgttgatt atgcattaag ttttcgtgtg aagatcaacg tattcttggg tcaatgcagg
     2581 tcaatcagtt tttgctccta cttctttagt ggactgaatt tcaagttagc tttcgcgtta
     2641 taaaataacc attttcaggc ttttttttgt taattatttc ttatatttct tcataggact
     2701 gttgggtttc tcactctagc gtattatgtt gattgtgtac ttgaattcac tcccaagatg
     2761 agaagcctga gttagtaaaa gattattttc tgttattctc tctaaacttc aaattgggag
     2821 gctaaagctg attttcttca attggagatc acagactaaa atactacgga gtttaaagta
     2881 tccccaacca ggtaacgttg aagcgttgtt cgccggtgga caagaaggta agtttggata
     2941 cgagtaagtt gttcgaacat cggtgcactg gtattcttca caagaaaccg gataggtgca
     3001 aagtgtgttg ttaggacaac ttccggggta cgggttccat tgaaggatgc agtcgtgcca
     3061 tatgaatggc gcatcgatgt ctataaggaa gtttgcgtgc aagtattgca tgtttacgta
     3121 tgttgtcatg atttcaacgc tatagagtgg cttagcggca tcggtatgtt tggtaacagg
     3181 agctacgatg gaagtgtatg gtggaacata agctgcttta gcttcatgtt tatgagagat
     3241 gaagctggct agaatgataa caagtagttg tagaaaaaaa tgcatttgaa agtttctggg
     3301 atttgttatt ttttgtttct gttcaaaact tcaaatgg
//
LOCUS       XM_071885931            1346 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chitinase CLP-like
            (LOC139903997), mRNA.
ACCESSION   XM_071885931
VERSION     XM_071885931.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1346
                     /gene="LOC139903997"
                     /note="chitinase CLP-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139903997"
     CDS             1..1311
                     /gene="LOC139903997"
                     /codon_start=1
                     /product="chitinase CLP-like"
                     /protein_id="XP_071742032.1"
                     /db_xref="GeneID:139903997"
                     /translation="MNSIIQLTFFILALFSHQQNAIAKPPYMSIVAATVNKHIDASKP
                     LYSVDVMTAEYNLAKHLIDIDAPFTWHDCIFDWRTSQTQCNYDRCETPVDCDEYQCVD
                     VRGEYAYKSPNCSPVNYNDNPTPPDYGPPSGYCKCSVRVVDPITGSCYQAELTFDSFT
                     FNTSNGRNTLVDEYYDIIPVVGCAPSSSFQSFPKDVSGVMAFSTSKHASPAYLSAPLK
                     YVLALCLPSTLSTPGALFYGSGSYYLSPQSNVDVRSYLSYTPLLKRPGSFGYFIGVNS
                     IVIKKRSINITVNATTKLSTIDPYTTLRTDIYNSVVKRFSSVTKRIPSANPIAPFGLC
                     YKASSNDTKVGVKVPDIDFGLEGGSKWTVSTANSMKQMTKDVACLAFVDGGATSEPAI
                     VIGTFQFEDNFVMFNVENSTFGFSSSLLKKKTSCSNFNFTSIYS"
     misc_feature    172..1257
                     /gene="LOC139903997"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(187..189,193..195,199..201,418..426,595..597)
                     /gene="LOC139903997"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    187..195
                     /gene="LOC139903997"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    187..189
                     /gene="LOC139903997"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(418..429,445..456)
                     /gene="LOC139903997"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgaattcca tcatacaact aacctttttc attctagctt tattctccca ccaacaaaat
       61 gcaatagcta aaccacctta catgagtatc gtagctgcca cagttaataa acatatcgat
      121 gcatctaagc ctctctatag cgttgacgta atgacagcgg agtataacct tgcaaaacac
      181 cttatagaca tcgatgctcc tttcacatgg catgactgca tcttcgattg gagaacatct
      241 caaacccagt gtaattacga ccgttgtgaa actcctgttg actgtgacga ataccaatgt
      301 gttgatgtcc gcggtgaata cgcatacaag agtcctaatt gctcaccggt taattataat
      361 gacaatccca caccacctga ttatggtcca cctagtggat attgtaaatg ttctgtccgt
      421 gtggtagacc ccattacagg atcatgttat caagccgaac tcactttcga ctcattcaca
      481 tttaacacaa gtaacggaag aaatactctt gttgatgaat attatgatat aatccctgtc
      541 gttgggtgtg ctccttcttc gtcttttcaa tcgttcccca aggacgttag tggtgtcatg
      601 gcgttttcaa cctctaagca cgcgtcaccg gcttatttat ctgcacccct taaatatgta
      661 ctagctttat gtttgcctag cacgttatcc actccagggg ctctatttta tggaagtggt
      721 tcatattacc tttctcctca atcaaatgtt gatgtaagga gttatctttc ttatacaccg
      781 ttgctaaaac gtccaggttc ttttggatac tttatcggtg tgaatagcat tgttattaaa
      841 aagagatcta ttaatattac cgtgaatgcc actaccaagc taagtacaat cgatccttac
      901 acaactctta gaacagacat ttataatagt gtggttaaaa ggttttcatc ggtaacaaaa
      961 cgaatccctt cagcaaatcc tatcgcacca tttggtcttt gttacaaggc gtctagcaat
     1021 gatacgaaag ttggagtaaa agtacctgac attgatttcg gtctcgaggg tgggtcgaaa
     1081 tggactgtat ccacggctaa ttccatgaag caaatgacaa aagacgttgc gtgccttgcg
     1141 tttgttgatg gtggtgctac gagtgagcct gcaattgtga ttgggacttt tcagtttgag
     1201 gacaactttg tgatgtttaa tgtggagaat tcgacttttg ggtttagttc ctcgttgcta
     1261 aagaagaaga cttcatgttc aaatttcaac ttcacttcaa tatactcgta gtatgagttg
     1321 aaattgtttg aataatttaa caagga
//
LOCUS       XM_071885932            1416 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable aspartic proteinase
            GIP2 (LOC139903998), mRNA.
ACCESSION   XM_071885932
VERSION     XM_071885932.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1416
                     /gene="LOC139903998"
                     /note="probable aspartic proteinase GIP2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139903998"
     CDS             1..1308
                     /gene="LOC139903998"
                     /codon_start=1
                     /product="probable aspartic proteinase GIP2"
                     /protein_id="XP_071742033.1"
                     /db_xref="GeneID:139903998"
                     /translation="MLSFLQLIVTLLAFILSHKYEAIAEYVPPYSSLVVPITKHTDAA
                     TPLYSVQFETSWDITRSKIRRFLIDTDAPFIWNDCIVQWNIYPGSCPDNLLCVSPVSC
                     EEYQCTQVRTSISFKNPSCQPETNSSTLPGWGYCTCPVNVVNPITGSCSQGLLNYEDL
                     MLSTSNGMNPFDGIYDVTINGACAPSSSFESFPANVTGVLALSSSPYSFQSFFFQDQV
                     MYRISLCLPSTTSTPGVLFYGNGPKYFKNVDVTSYLSYTPLLKHPDSFGYFIGVSSIV
                     IKKRSIEVPMNTTTKLSTIEPYTTLRTDIYNQVIRRFSMVTKRFRTVKPIAPFGLCYK
                     SYTNGTEYGLKVPDIDFGLENGKKWTVSTANSMKQVTKDVVCLAFVDGGATSEHGIVI
                     GTFQFEDNFVSFDLKNSTFGFSSSLLSKQISCANFNFTTIASN"
     misc_feature    196..1251
                     /gene="LOC139903998"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(205..207,211..213,217..219,421..429,595..597)
                     /gene="LOC139903998"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    205..213
                     /gene="LOC139903998"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    205..207
                     /gene="LOC139903998"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(421..432,448..459)
                     /gene="LOC139903998"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgctttcgt ttctacaact aattgttacc cttttagctt tcatattatc tcataagtat
       61 gaagctatag cagaatatgt gccaccttat agttccttag ttgttccaat aaccaaacat
      121 acagacgctg caacgcctct ctacagcgtt caatttgaaa cttcctggga cattacaaga
      181 agcaagataa gaagattcct aatcgacaca gacgctccgt tcatatggaa cgactgtatc
      241 gttcaatgga acatataccc gggcagttgt cccgacaact tgctttgtgt ttctccagtt
      301 tcttgtgaag aatatcaatg cacgcaggtg cgaacttcta tctctttcaa gaacccttct
      361 tgtcaacctg aaaccaacag ttcgacgtta cctggttggg gttattgtac gtgtccagtc
      421 aacgtggtca acccgattac tggatcttgc agccaaggcc tacttaacta tgaagatcta
      481 atgttgagta caagcaacgg tatgaatcct tttgatggaa tctatgatgt tactattaac
      541 ggtgcttgtg ctccttcttc gtcttttgaa tcgttcccag ccaatgtgac cggtgtcttg
      601 gctctttcgt catcacccta ctcgtttcag tcgttcttct ttcaagatca agttatgtat
      661 agaatatctt tgtgtttgcc tagcaccact tccactcctg gtgttctttt ctacggaaac
      721 ggtcctaaat actttaaaaa tgttgacgta acgagttatc tttcttatac cccattacta
      781 aagcatccag attctttcgg atactttatc ggtgtcagtt ctattgtaat taaaaagaga
      841 tctatcgagg ttcccatgaa tacaacaacc aagcttagta caatcgagcc ttacaccacc
      901 cttagaaccg acatatataa tcaagtgatt cgtaggtttt caatggtaac aaaacgattt
      961 cggacagtaa agccaatcgc accgtttggc ctttgttaca agagttacac taatggtacc
     1021 gaatatggtt taaaagtccc ggatattgat tttggtcttg aaaatgggaa gaagtggact
     1081 gtatccactg ctaactcaat gaaacaagtg actaaagacg tggtgtgcct agcgtttgtt
     1141 gacggtggtg cgactagtga acatggtata gtgattggaa cgtttcaatt cgaggataac
     1201 tttgtatcgt tcgatctaaa gaattcgacc tttgggttta gttcatcgtt gttaagtaag
     1261 cagatttctt gtgccaactt caactttacg acaatagctt ccaactaaag ctaagcttta
     1321 tccaacatgc gggtatcaaa ctttggattc atacccattc attacggttt ccttacactt
     1381 tcgtaataaa gaacttcatg ttcaaggatc ttccca
//
LOCUS       XM_071885933            1416 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable aspartic proteinase
            GIP2 (LOC139903999), mRNA.
ACCESSION   XM_071885933
VERSION     XM_071885933.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1416
                     /gene="LOC139903999"
                     /note="probable aspartic proteinase GIP2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139903999"
     CDS             1..1308
                     /gene="LOC139903999"
                     /codon_start=1
                     /product="probable aspartic proteinase GIP2"
                     /protein_id="XP_071742034.1"
                     /db_xref="GeneID:139903999"
                     /translation="MHSFLQLIVTLLAFILFHEYEVVAVYVPPYSSLLVPITKHTDAA
                     ATPLYSVPFETSWDSTRSKPKNFLIDTDAPFTWNDCIVDWNNLDQPGICTDSVCTYPV
                     SCEDDLCLDVRTISFKNPSCPLETNNSTLPGWGDCTCPVNVVNPITGSCIQGLLNYQD
                     LMLRTSNGTNPIDSTYGVTPDGACVPSTLESFPANVTGVLALSTSPFAFQSFININNV
                     MSIISLCLPSTTSDPGVLFFGKGPYYFQNVDIRSYLSYTPLLNHPDSFGYFIGVTSIV
                     IKKRSNQVPTNATTKLSTIEPYTTLRTDIYNQVIRRFSMVTKRIQTVKPIAPFGLCYK
                     SYTNSTEVGLKVPDIDFSLESGNKWSVSTANSMKQMTEDVACLAFVDGGATSEHGIVI
                     GTFQYEDNFVSFDLKNSTFGFSSSLLRKQISCANFNFTTIASN"
     misc_feature    196..1251
                     /gene="LOC139903999"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(208..210,214..216,220..222,424..432,595..597)
                     /gene="LOC139903999"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    208..216
                     /gene="LOC139903999"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    208..210
                     /gene="LOC139903999"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(424..435,451..462)
                     /gene="LOC139903999"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgcattcat ttctacaact aattgttacc cttttagctt tcatattatt tcatgagtat
       61 gaagtcgtag cagtatatgt gccgccttat agttccctac ttgttccaat aaccaaacat
      121 acagatgctg ctgcaacacc tctctacagt gttccattcg aaacttcctg ggactcgacg
      181 agaagcaagc caaaaaattt cctaatcgac acagacgctc cattcacatg gaacgactgc
      241 atcgttgact ggaacaactt agatcaaccg ggcatttgta ccgactcagt ttgtacgtat
      301 ccagtttctt gtgaagatga tctatgctta gatgtgcgaa ctatctcttt caagaaccct
      361 tcttgccctc tcgaaaccaa caattcgacg ttacccggtt ggggtgattg tacgtgtcca
      421 gtcaatgtgg tcaacccgat tactggatct tgcatccaag gcctactcaa ctaccaagat
      481 ttaatgttga gaacaagcaa cggtacgaat cctatcgata gtacctatgg tgttacccct
      541 gacggtgcat gtgttccttc aactttagaa tcgttccccg ccaatgtgac cggtgtcctg
      601 gctctttcaa cgtcgccctt cgcgttccag tcatttatca atataaataa cgttatgtct
      661 attatatctt tgtgtttgcc tagcaccacc tccgatcctg gtgttctttt cttcggaaaa
      721 ggtccttatt actttcaaaa cgttgacata aggagttatc tttcatatac tccgttacta
      781 aaccatccag attctttcgg atactttatc ggtgtcactt ctattgtaat taaaaagaga
      841 tctaaccagg ttcccacgaa cgcaacaacc aaacttagta caatcgagcc ttacactacc
      901 cttagaaccg acatatataa tcaagtgatc cgtaggttct caatggtaac aaagcgaatt
      961 cagacggtaa aaccaatcgc accattcggc ctttgttaca agagttacac caatagtacc
     1021 gaagttggtt taaaagttcc agatattgac tttagccttg agagtgggaa taagtggagt
     1081 gtttcgactg ctaactccat gaagcaaatg acagaagacg tggcgtgcct agcgtttgtt
     1141 gacggtggtg cgactagtga acatggaatc gtgattggaa cgtttcaata tgaagataac
     1201 tttgtgtcgt ttgatctaaa gaactcgacc tttgggttta gttcatcgtt gttaaggaag
     1261 cagatttctt gtgcaaattt caactttacg accatagcta gcaactgaag ctagatttat
     1321 agaacgtgca ataccatgtc tatccgtaac agtttccttt tctaataaag aacttcatgt
     1381 tcaaggttct cgacagagtc gaaattactt atctcg
//
LOCUS       XM_071885934            4026 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides isoleucine--tRNA ligase,
            cytoplasmic-like (LOC139904000), transcript variant X1, mRNA.
ACCESSION   XM_071885934
VERSION     XM_071885934.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4026
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4026
                     /gene="LOC139904000"
                     /note="isoleucine--tRNA ligase, cytoplasmic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139904000"
     CDS             223..3774
                     /gene="LOC139904000"
                     /codon_start=1
                     /product="isoleucine--tRNA ligase, cytoplasmic-like
                     isoform X1"
                     /protein_id="XP_071742035.1"
                     /db_xref="GeneID:139904000"
                     /translation="MDDVCEGKDFSFPKQEEKILEWWTDVKAFETQLEKTKDLPEYIF
                     YDGPPFATGLPHYGHILAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEHEIDIKLG
                     IKSREDVMNMGIDKYNEECRSIVTRYVGEWEKVITRTGRWIDFRNDYKTMDLNFMESV
                     WYVFHQLFEKKLVYRGFKVMPYSTGCKTPLSNFEANSNYKDVPDPEIMVTFPIIDDQD
                     GAAFVAWTTTPWTLPSNLALCVNSNLVYVKVKSKSNGKVYVVAESRLSELPIEKPKKG
                     TPNGNADDTSLPKTKGSTGGKAKSSVVSYDVLDKFPGSSLVGKKYVPLFDYFKDHTET
                     AFRVVADDYVTSDSGTGIVHCAPAFGEDDYRVCIKNNIITQGENLVMPVDDDGCFTER
                     ITDFSGRYVKEADKDIIQAVKEKDRLVKTGSFTHSYPFCWRSDTPLIYRAVPSWFVAV
                     ETLKDRLLENIKETTWVPSFVKEKRFQNWLENARDWAISRSRFWGTPLPIWISKDGVD
                     IVVICSVEELERLSGMKVTDLHRHKIDHITIPSPRGPEFGVLRRVEDVFDCWFESGSM
                     PYAYIHYPFENKEFFDKNFPGHFVAEGLDQTRGWFYTLMVLSTALFDKPAFKNLICNG
                     LVLAEDGKKMSKRLKNYPSPMEVINDYGADALRLYIINSPVVRAEPLRFKKDGVYSVV
                     KDVFLPWYNAYRFLVQNAKRLEVEGFASFVPLDRLTLLNSANVLDQWINSATQSLVHF
                     VRQEMDAYRLYTVVPYLLKFIDNLTNIYVRFNRKRLKGRTGEEDCRTALSTLYHVLLT
                     SCKSMAPFTPFFTEVLYKNLRKVSNGSEESIHYCSFPQVEGKGGNRIEQSVNRMMTII
                     DHARNIRERHNKPLKTPLKEMILVHPDAEFLDDITGKLKEYVLEELNVKSIVPCNDPL
                     MYASLRAEPDFSVLGKRLGKSMREVAGSVKAMPQQDILSFEKAGEITIAGHCLKLTDI
                     KIVREFKRPAGVTEEQMDASSDGDVLVIMDLRPDESLVEAGFAREVVNRIQKLRKKSA
                     LEPTDLVEVYFESLDKDASVSTGILKSQEAYIKEALGSQLLDFSTIPTHAVIIAEETY
                     KNISNFDFKITLSRAALRFNENAVLELYSGDAKYAQGLQVYLLSRDHSNLRSEFQLGN
                     GKIKVDCIENQPAVDVVLGKHVFLTVGDYFASSKALW"
     misc_feature    229..3756
                     /gene="LOC139904000"
                     /note="aminoacyl-tRNA ligase; Region: PLN02882"
                     /db_xref="CDD:215477"
ORIGIN      
        1 taatcagaaa taaacgtagt ataaacaaat aaaaccctat cgccgttctt tcactctgct
       61 cgcacaccaa actcgcgaag tactcccgct ctcgatcgga ccgccgctgc agtggacgac
      121 ttacagccga catctttaat caccgctgat cgtatccatc atcgtcaatc gtctacatat
      181 tttcagtaac ggaaggaagg gttagggttt tgatcttaag caatggatga tgtatgcgaa
      241 ggaaaagatt tctcattccc gaaacaagaa gagaagattc tagaatggtg gactgatgtc
      301 aaagcatttg aaactcagct tgaaaaaact aaagacctac cagaatacat cttctacgat
      361 gggcctccat ttgccaccgg tctccctcac tatggccaca ttttagctgg aacaatcaag
      421 gacattgtca cgcggtacca gaccatgacg gggcaccatg tcactcgacg gttcggttgg
      481 gactgccatg ggttgccggt ggagcatgag attgacatca agcttgggat taagagcaga
      541 gaggatgtga tgaatatggg tattgataag tataatgagg aatgcaggag tattgttact
      601 aggtacgttg gggagtggga gaaggtgatt acaagaactg ggagatggat tgattttagg
      661 aatgattata aaaccatgga tttgaatttt atggagagtg tatggtacgt gtttcatcaa
      721 ttatttgaga agaagcttgt ttatagaggg ttcaaggtga tgccatacag cactggctgc
      781 aagactccac tgtccaattt cgaagctaat tcaaactata aggacgtgcc tgatccggaa
      841 ataatggtga cttttccaat cattgatgat caagatggtg cagcatttgt tgcatggaca
      901 acaacaccat ggaccctccc tagtaatctt gcactttgtg ttaactccaa tcttgtatat
      961 gtgaaggtga agagcaagtc taatgggaaa gtttatgttg ttgctgaatc tcgactatca
     1021 gagcttccaa tagagaaacc aaagaaagga acacctaatg gaaatgcgga tgatacgtca
     1081 cttccaaaaa cgaagggatc tactggtgga aaagctaaaa gttctgttgt ttcttatgat
     1141 gtgttggata aatttccagg atcgtccctc gttggtaaaa agtatgtgcc attatttgat
     1201 tatttcaagg atcacacaga aacggcattc agagttgttg cagatgatta tgttacttct
     1261 gatagcggaa ctggaatcgt gcactgtgct ccagcatttg gtgaagacga ttatcgtgtt
     1321 tgtataaaaa ataatataat tactcaggga gaaaatctag ttatgcctgt tgatgacgat
     1381 ggctgcttta cagagaggat cactgatttc agtggtcgtt atgttaaaga ggcagataaa
     1441 gatatcattc aagcagtgaa ggagaaagac aggctggtga aaaccggaag ctttacacat
     1501 tcatatccat tttgttggag atctgatacg cctctcatct acagagcagt tcccagctgg
     1561 ttcgttgccg tggaaacgct gaaagataga ttgctagaga acattaagga gacgacgtgg
     1621 gttccatcgt ttgtgaagga aaagcgcttt cagaattggt tggaaaatgc aagagactgg
     1681 gctattagtc gaagtcggtt ttggggaact cctcttccca tatggattag taaggatggt
     1741 gtggatattg tagttatttg ttctgtcgaa gaacttgaaa ggctttcagg aatgaaggtc
     1801 actgacttac atcgccacaa aattgatcac attacaattc ccagcccacg tggtccagaa
     1861 tttggtgtgc ttcgtcgtgt agaggatgta tttgactgct ggtttgagag tgggtccatg
     1921 ccgtatgcat atatccatta cccatttgaa aataaagaat tctttgacaa gaactttcct
     1981 ggacattttg tagccgaagg gttagatcaa actcgtggat ggttttatac tctcatggtt
     2041 ctgtctacag cattatttga taaaccagca ttcaagaatc tcatatgcaa tggccttgtg
     2101 ttggccgagg atggtaaaaa gatgagtaaa agattgaaga attatccttc tcctatggaa
     2161 gttatcaatg attatggtgc tgatgcacta agattgtaca taatcaattc tccggttgtg
     2221 cgcgcagaac ccttacgatt taaaaaggat ggagtctata gtgttgtcaa agatgtattt
     2281 ttgccatggt ataatgccta tagatttctt gttcaaaatg caaaaagact tgaagtggaa
     2341 ggttttgcat catttgttcc tcttgatcgg ctcactcttc ttaactcagc taatgtgctt
     2401 gatcagtgga tcaactcagc cactcagagt ctggttcatt ttgttcgaca ggaaatggat
     2461 gcttatcgac tctatacagt ggttccttat ctcttgaaat tcattgacaa tctaacgaat
     2521 atatatgtac gattcaaccg gaaaagattg aaaggtcgca ctggagaaga ggactgcaga
     2581 actgcgcttt caactctcta tcatgtgctt ttaacttctt gcaaatcaat ggctccattc
     2641 acaccattct tcactgaggt tctctataag aacttgagaa aagtatcgaa tggatcggag
     2701 gaaagcattc actattgtag tttccctcaa gtagaaggaa aggggggaaa tcgtatcgag
     2761 caaagtgtaa atagaatgat gacaattatc gatcacgcac gtaatattcg tgagcgacac
     2821 aacaaacctc tgaaaactcc actgaaagag atgattcttg tacatccaga tgccgagttt
     2881 cttgatgata ttactggtaa actgaaagag tatgtattag aggagctcaa tgttaaatct
     2941 attgttccgt gcaatgatcc tttgatgtat gcttctttac gcgctgaacc tgatttcagt
     3001 gtgttgggca aaagactggg aaaatcaatg agagaagttg ctggctcagt gaaggctatg
     3061 ccacaacagg atattttatc ttttgaaaaa gccggggaaa ttactattgc tggccactgc
     3121 ttgaagctca ctgacatcaa gattgtacgt gaatttaagc gcccagctgg tgtcacagag
     3181 gagcagatgg atgcgtctag tgatggtgat gttttggtta taatggactt gcgacctgat
     3241 gagtctttag tcgaagctgg ttttgctcga gaggttgtca accgaatcca aaagttaagg
     3301 aaaaagtctg cacttgaacc cacagattta gtggaggttt actttgagtc attggataaa
     3361 gatgcttcag tttcaactgg aattctaaaa tcacaggaag cctacatcaa agaggctcta
     3421 ggctctcagt tactcgactt cagcactatt ccaacccatg ctgtaatcat tgctgaggag
     3481 acttacaaga acatttcaaa ttttgacttc aaaataactt tgtcaagagc cgcattacga
     3541 tttaacgaaa atgcagtcct tgaattgtat tcaggagatg caaaatatgc acaaggattg
     3601 caggtatatt tgttgtccag ggaccatagc aatctgagat cagaatttca attgggaaat
     3661 gggaagatta aagtggattg cattgaaaat cagcctgctg tcgatgtggt cctgggaaaa
     3721 catgtgttct tgacagttgg ggattatttt gctagcagca aagctctttg gtaattcgtt
     3781 gatacaattt ttggtcaaaa attgttacga ctggcatcaa aagaaaaatt accatacaat
     3841 tccaagttgt caattaaatt cgccagagag tttgtattgt tggaatcaaa aatcgaattg
     3901 catttttttc tttttttgat atcttacggg atgaatacaa acgacgggaa gaaatcttat
     3961 ggggtaacct aagtaatgtg ctatatttgt tatacggttc agttttgagt gctagggcac
     4021 tataat
//
LOCUS       XM_071885935            3754 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides isoleucine--tRNA ligase,
            cytoplasmic-like (LOC139904000), transcript variant X2, mRNA.
ACCESSION   XM_071885935
VERSION     XM_071885935.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3754
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3754
                     /gene="LOC139904000"
                     /note="isoleucine--tRNA ligase, cytoplasmic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904000"
     CDS             572..3502
                     /gene="LOC139904000"
                     /codon_start=1
                     /product="isoleucine--tRNA ligase, cytoplasmic-like
                     isoform X2"
                     /protein_id="XP_071742036.1"
                     /db_xref="GeneID:139904000"
                     /translation="MVTFPIIDDQDGAAFVAWTTTPWTLPSNLALCVNSNLVYVKVKS
                     KSNGKVYVVAESRLSELPIEKPKKGTPNGNADDTSLPKTKGSTGGKAKSSVVSYDVLD
                     KFPGSSLVGKKYVPLFDYFKDHTETAFRVVADDYVTSDSGTGIVHCAPAFGEDDYRVC
                     IKNNIITQGENLVMPVDDDGCFTERITDFSGRYVKEADKDIIQAVKEKDRLVKTGSFT
                     HSYPFCWRSDTPLIYRAVPSWFVAVETLKDRLLENIKETTWVPSFVKEKRFQNWLENA
                     RDWAISRSRFWGTPLPIWISKDGVDIVVICSVEELERLSGMKVTDLHRHKIDHITIPS
                     PRGPEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENKEFFDKNFPGHFVAEGLDQTRG
                     WFYTLMVLSTALFDKPAFKNLICNGLVLAEDGKKMSKRLKNYPSPMEVINDYGADALR
                     LYIINSPVVRAEPLRFKKDGVYSVVKDVFLPWYNAYRFLVQNAKRLEVEGFASFVPLD
                     RLTLLNSANVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFIDNLTNIYVRFNR
                     KRLKGRTGEEDCRTALSTLYHVLLTSCKSMAPFTPFFTEVLYKNLRKVSNGSEESIHY
                     CSFPQVEGKGGNRIEQSVNRMMTIIDHARNIRERHNKPLKTPLKEMILVHPDAEFLDD
                     ITGKLKEYVLEELNVKSIVPCNDPLMYASLRAEPDFSVLGKRLGKSMREVAGSVKAMP
                     QQDILSFEKAGEITIAGHCLKLTDIKIVREFKRPAGVTEEQMDASSDGDVLVIMDLRP
                     DESLVEAGFAREVVNRIQKLRKKSALEPTDLVEVYFESLDKDASVSTGILKSQEAYIK
                     EALGSQLLDFSTIPTHAVIIAEETYKNISNFDFKITLSRAALRFNENAVLELYSGDAK
                     YAQGLQVYLLSRDHSNLRSEFQLGNGKIKVDCIENQPAVDVVLGKHVFLTVGDYFASS
                     KALW"
     misc_feature    572..3484
                     /gene="LOC139904000"
                     /note="aminoacyl-tRNA ligase; Region: PLN02882"
                     /db_xref="CDD:215477"
ORIGIN      
        1 taacggaact ggctatctca cttttcattt tcatgtgcaa tttattctgg cgcgttagga
       61 tctgacttta ggatcattta cctttgaacg tcacaaggct gttgtaaatg tacaccatat
      121 aaacacatac atatgataat gtaggcgtag cttatggtag tagttactta atagttaatc
      181 cgttaacagg attgtgtgag atatgttagc tgttacataa ttgtatatat ttttatctcc
      241 gtttttccac gttttttgta tatatttttt tcattttttc aatgcccata cgacatcttt
      301 catgcatgta ttgacttctc cttttttact tttatttgtt tatttgcttt tgtcacattg
      361 gtcggaggtc ctcctggata gcagtctctc tattctcgag tagagggagg gatgactttc
      421 tctaacggtg ggtggagaat cgattttttt ctacttgcta gtggagaaac gacttctttt
      481 taagaggaac gattgtctac atcctacctc cccatacccc acttttgtgg gattgagtat
      541 tgttgttgtt gacgtgcctg atccggaaat aatggtgact tttccaatca ttgatgatca
      601 agatggtgca gcatttgttg catggacaac aacaccatgg accctcccta gtaatcttgc
      661 actttgtgtt aactccaatc ttgtatatgt gaaggtgaag agcaagtcta atgggaaagt
      721 ttatgttgtt gctgaatctc gactatcaga gcttccaata gagaaaccaa agaaaggaac
      781 acctaatgga aatgcggatg atacgtcact tccaaaaacg aagggatcta ctggtggaaa
      841 agctaaaagt tctgttgttt cttatgatgt gttggataaa tttccaggat cgtccctcgt
      901 tggtaaaaag tatgtgccat tatttgatta tttcaaggat cacacagaaa cggcattcag
      961 agttgttgca gatgattatg ttacttctga tagcggaact ggaatcgtgc actgtgctcc
     1021 agcatttggt gaagacgatt atcgtgtttg tataaaaaat aatataatta ctcagggaga
     1081 aaatctagtt atgcctgttg atgacgatgg ctgctttaca gagaggatca ctgatttcag
     1141 tggtcgttat gttaaagagg cagataaaga tatcattcaa gcagtgaagg agaaagacag
     1201 gctggtgaaa accggaagct ttacacattc atatccattt tgttggagat ctgatacgcc
     1261 tctcatctac agagcagttc ccagctggtt cgttgccgtg gaaacgctga aagatagatt
     1321 gctagagaac attaaggaga cgacgtgggt tccatcgttt gtgaaggaaa agcgctttca
     1381 gaattggttg gaaaatgcaa gagactgggc tattagtcga agtcggtttt ggggaactcc
     1441 tcttcccata tggattagta aggatggtgt ggatattgta gttatttgtt ctgtcgaaga
     1501 acttgaaagg ctttcaggaa tgaaggtcac tgacttacat cgccacaaaa ttgatcacat
     1561 tacaattccc agcccacgtg gtccagaatt tggtgtgctt cgtcgtgtag aggatgtatt
     1621 tgactgctgg tttgagagtg ggtccatgcc gtatgcatat atccattacc catttgaaaa
     1681 taaagaattc tttgacaaga actttcctgg acattttgta gccgaagggt tagatcaaac
     1741 tcgtggatgg ttttatactc tcatggttct gtctacagca ttatttgata aaccagcatt
     1801 caagaatctc atatgcaatg gccttgtgtt ggccgaggat ggtaaaaaga tgagtaaaag
     1861 attgaagaat tatccttctc ctatggaagt tatcaatgat tatggtgctg atgcactaag
     1921 attgtacata atcaattctc cggttgtgcg cgcagaaccc ttacgattta aaaaggatgg
     1981 agtctatagt gttgtcaaag atgtattttt gccatggtat aatgcctata gatttcttgt
     2041 tcaaaatgca aaaagacttg aagtggaagg ttttgcatca tttgttcctc ttgatcggct
     2101 cactcttctt aactcagcta atgtgcttga tcagtggatc aactcagcca ctcagagtct
     2161 ggttcatttt gttcgacagg aaatggatgc ttatcgactc tatacagtgg ttccttatct
     2221 cttgaaattc attgacaatc taacgaatat atatgtacga ttcaaccgga aaagattgaa
     2281 aggtcgcact ggagaagagg actgcagaac tgcgctttca actctctatc atgtgctttt
     2341 aacttcttgc aaatcaatgg ctccattcac accattcttc actgaggttc tctataagaa
     2401 cttgagaaaa gtatcgaatg gatcggagga aagcattcac tattgtagtt tccctcaagt
     2461 agaaggaaag gggggaaatc gtatcgagca aagtgtaaat agaatgatga caattatcga
     2521 tcacgcacgt aatattcgtg agcgacacaa caaacctctg aaaactccac tgaaagagat
     2581 gattcttgta catccagatg ccgagtttct tgatgatatt actggtaaac tgaaagagta
     2641 tgtattagag gagctcaatg ttaaatctat tgttccgtgc aatgatcctt tgatgtatgc
     2701 ttctttacgc gctgaacctg atttcagtgt gttgggcaaa agactgggaa aatcaatgag
     2761 agaagttgct ggctcagtga aggctatgcc acaacaggat attttatctt ttgaaaaagc
     2821 cggggaaatt actattgctg gccactgctt gaagctcact gacatcaaga ttgtacgtga
     2881 atttaagcgc ccagctggtg tcacagagga gcagatggat gcgtctagtg atggtgatgt
     2941 tttggttata atggacttgc gacctgatga gtctttagtc gaagctggtt ttgctcgaga
     3001 ggttgtcaac cgaatccaaa agttaaggaa aaagtctgca cttgaaccca cagatttagt
     3061 ggaggtttac tttgagtcat tggataaaga tgcttcagtt tcaactggaa ttctaaaatc
     3121 acaggaagcc tacatcaaag aggctctagg ctctcagtta ctcgacttca gcactattcc
     3181 aacccatgct gtaatcattg ctgaggagac ttacaagaac atttcaaatt ttgacttcaa
     3241 aataactttg tcaagagccg cattacgatt taacgaaaat gcagtccttg aattgtattc
     3301 aggagatgca aaatatgcac aaggattgca ggtatatttg ttgtccaggg accatagcaa
     3361 tctgagatca gaatttcaat tgggaaatgg gaagattaaa gtggattgca ttgaaaatca
     3421 gcctgctgtc gatgtggtcc tgggaaaaca tgtgttcttg acagttgggg attattttgc
     3481 tagcagcaaa gctctttggt aattcgttga tacaattttt ggtcaaaaat tgttacgact
     3541 ggcatcaaaa gaaaaattac catacaattc caagttgtca attaaattcg ccagagagtt
     3601 tgtattgttg gaatcaaaaa tcgaattgca tttttttctt tttttgatat cttacgggat
     3661 gaatacaaac gacgggaaga aatcttatgg ggtaacctaa gtaatgtgct atatttgtta
     3721 tacggttcag ttttgagtgc tagggcacta taat
//
LOCUS       XM_071885936            2260 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904002), mRNA.
ACCESSION   XM_071885936
VERSION     XM_071885936.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2260
                     /gene="LOC139904002"
                     /note="uncharacterized LOC139904002; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139904002"
     CDS             308..2017
                     /gene="LOC139904002"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742037.1"
                     /db_xref="GeneID:139904002"
                     /translation="MSKEEFVKIQTCSLKVNIHCDGCKRKVKKILQKIEGVYTVNIDP
                     EQSKVTVSGDVDPDTLIKKLAKGGKLAEIWGVSKPNQQINNQLKNMQIEGGKGGGGGG
                     GGGGNNKNQPQKGGGGNNNNNNNGNNNSKNHQAPPQGGGPTAQQLQQLQQLQKMKGFQ
                     DLKMHPQFKDMKIPNLGGVPGSGGGGAGTGGKNGQKGAKVIDEDDESDDDYDDDDEFD
                     DEDYDDDEDFDDVPVKKPAVVGGGGGGQMGNMLPQLMKSGQIPPQYMKNGQLPPGMMK
                     SGQMPPQQMKGGAPPMGNNGGNGGKKGNGGGVNIPVQGGNGGGGKKGGGGGGGGGGGG
                     NQNQGGGGGNQNQGGGGGGKNGVKNGGGPGDGQNKNGGGQNKNGGQGGGGNMNMNMSG
                     AGGKKGGMNNGIDGMPNMMGGMNGGGGGNVGHMGNMSASMGPRMGQMGGQMGASMGQM
                     GNMPSVQGHPAAAMMNSGGGGVPGGGYFQGGPDAMAGNPYYQQQLAAMMNQQQAQAQA
                     NGGGGERFHPMMYARPPPAVNYMQPPPYQQPYPPYPYPHPPHGDPITHYFSDENTSSC
                     DIM"
     misc_feature    350..493
                     /gene="LOC139904002"
                     /note="Heavy-metal-associated domain; Region: HMA;
                     pfam00403"
                     /db_xref="CDD:459804"
ORIGIN      
        1 tctctccctc taaataaaat tctaatttca gagattttaa tgtctacccc caacctctga
       61 atgttgttgt caaacttctc tttgttgttg ctattttgtt tatcgtttta gtttttctta
      121 cccttttcac tctaatcaaa gaaaccccaa aactacccat tttttagttt tcttgatttt
      181 cacagagtat tcttgatcgt tcttaatttt tagtttatgc tctgtttctt gtcaattcag
      241 atctgtgaaa cacatatatc tcatttgcag ctctatttct gagttttgtt tatattaact
      301 tgaaaacatg agtaaagaag agtttgtgaa gattcagact tgctctctga aagtgaacat
      361 acactgtgat gggtgtaaaa ggaaggttaa gaaaatactt cagaaaattg aaggggttta
      421 caccgttaat atagatccag aacagagcaa ggttacagta tcaggggatg tcgatcctga
      481 tacactgatc aagaaactgg caaaaggtgg aaaacttgca gagatttggg gtgtttctaa
      541 gccaaatcaa caaatcaata accagcttaa aaacatgcag attgagggtg gtaaaggcgg
      601 cggcggaggt ggcggtggcg gtggaaataa taaaaatcag cctcaaaaag gtggtggtgg
      661 aaataataat aataataaca atggtaacaa taatagtaaa aatcaccaag cgccgccgca
      721 aggcggtggt ccgacggcac aacaacttca gcagcttcaa cagttgcaaa aaatgaaagg
      781 gtttcaagat ctgaaaatgc atcctcaatt taaggatatg aaaattccta atcttggtgg
      841 cgttcccgga agtggtggtg gcggagccgg taccggtgga aagaacggac agaagggtgc
      901 gaaggtgatt gatgaagatg atgagagtga tgatgattat gacgacgatg atgaatttga
      961 tgatgaagat tatgatgatg acgaggactt tgatgatgtt cctgtgaaga aaccggcggt
     1021 ggtcggcggt ggtggaggtg gtcagatggg taatatgtta ccgcagctta tgaaaagtgg
     1081 gcagattccg ccacagtata tgaaaaacgg tcagttgccg ccgggaatga tgaaaagtgg
     1141 tcagatgcca cctcagcaaa tgaaaggcgg tgctccgcca atggggaata acggtggaaa
     1201 tggagggaag aaaggaaatg gtggcggtgt taatattccg gttcagggtg gaaatggtgg
     1261 cggtggaaag aaaggtggtg gtggtggtgg tggtggtggt ggtggaggga atcaaaatca
     1321 gggtggtggt ggagggaatc aaaatcaggg tggtggtggt ggaggaaaga atggtgtaaa
     1381 gaatggcggt ggtccaggtg atggtcaaaa caagaacggt ggtggtcaaa ataagaacgg
     1441 tggtcaaggg ggtggtggaa acatgaatat gaatatgagt ggggctggtg gtaagaaagg
     1501 tggaatgaat aatgggatag atggcatgcc aaacatgatg ggtggtatga atggtggtgg
     1561 tgggggcaat gtggggcata tgggaaacat gagtgcatcc atgggtccta gaatgggtca
     1621 aatgggcggt caaatgggtg catccatggg tcaaatgggt aacatgccgt cggttcaagg
     1681 acatcctgcg gcagccatga tgaacagtgg tggtggtggt gtgcctggtg gtggatattt
     1741 tcaaggtgga ccagatgcta tggcgggcaa cccgtattat caacaacaat tagcggcaat
     1801 gatgaatcag caacaagcac aagcgcaagc gaatggtggt ggaggtgaac ggtttcatcc
     1861 aatgatgtat gctcgaccgc caccagcggt taactatatg caaccaccgc catatcagca
     1921 gccttaccca ccataccctt acccacaccc accacatggt gatccaatca cacattactt
     1981 cagtgatgaa aatacctcaa gttgcgacat aatgtaagaa tccccaatcg gaaaggtttc
     2041 ctgtggcggt ttgtgaagac atttaatggt ggttagttcg tgaccgaaca ccggacttta
     2101 tgaaggggga ccatcagatg gggtgttctt tagctttatt tatttccttt ttttaatttt
     2161 gttttactta atcctaaaga tggattaggg ttttttatgt tatgatcata ggaagtaatt
     2221 tatagatatg atgatgataa tgataatata ttatcaaaac
//
LOCUS       XM_071885937            1627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable E3
            ubiquitin-protein ligase LUL4 (LOC139904003), mRNA.
ACCESSION   XM_071885937
VERSION     XM_071885937.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1627
                     /gene="LOC139904003"
                     /note="probable E3 ubiquitin-protein ligase LUL4; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139904003"
     CDS             197..1285
                     /gene="LOC139904003"
                     /codon_start=1
                     /product="probable E3 ubiquitin-protein ligase LUL4"
                     /protein_id="XP_071742038.1"
                     /db_xref="GeneID:139904003"
                     /translation="MGISSSSNRRRNNNNNNYHYNQNPPSQLISSSLTDPSYSSPPYI
                     YSPPPPPPPPAPAPAPPPPVYHHPYNYGPYNHNPQPNYNYGWAPPMRPPQLVPAPPPM
                     PPPAYVDHQQAKKVKNNVNLHKDTLKIEVDEQNPDCHLVSFVFDALFDGSITIYYFAK
                     EEPGCKFVPLYTEAFVPVKVPFQKGIGQKFQQPSGTGIDLGFFDLDSLSKPSSGEDVY
                     PLVICAETTMPLYTPDQNLYNPLANTVITTPHMQITQAVLEKNNEHPFKVRVMRQILW
                     IDGVRYELREIYGIGKSEESFDETGSGEECVICMTEPKDTAVLPCRHMCLCSECAKAL
                     RLQSNKCPICRQNIEELMEIKINTENHQ"
     misc_feature    1109..1231
                     /gene="LOC139904003"
                     /note="Modified RING finger, HC subclass (C3HC5-type),
                     found in mahogunin RING finger protein 1 (MGRN1), RING
                     finger protein 157 (RNF157) and similar proteins; Region:
                     mRING-HC-C3HC5_MGRN1-like; cd16789"
                     /db_xref="CDD:438443"
ORIGIN      
        1 aaaatcaaac ccctttgcaa cttgcagggt tgcaaccacc gccaccaatt cctgacacca
       61 aacatctctc attctttatt tcttcctttt cgattccttc tgaatcaagt ttctgtcttt
      121 ccaaaaaccc atcttccaat tccccccaat tttgcatcaa aatcaatcaa ttaatcaaga
      181 taaagaacat actcaaatgg gtatatcatc aagcagtaac agaagaagaa acaacaacaa
      241 taacaactat cattacaatc aaaacccacc ttcacaactc atttcttctt ctttaactga
      301 tccttcttat tcttcacccc catacatcta ttctccaccc ccacccccac ctccaccggc
      361 gccggcaccg gcaccgccac cgccggtgta ccaccaccca tacaattatg ggccttataa
      421 tcataatccc caacccaact acaattatgg gtgggcccca cctatgcggc ctccgcaatt
      481 ggtgccggcg ccgccaccca tgccgccgcc ggcgtatgtt gatcatcagc aagctaagaa
      541 agtgaaaaat aatgtcaatt tgcataaaga tactctgaaa attgaagttg atgaacagaa
      601 tcctgactgt catttggttt ctttcgtctt tgatgcttta tttgatggca gcataactat
      661 ctattacttt gcaaaggaag aacctggttg taagtttgtt ccgttatata cggaagcgtt
      721 tgtaccagtc aaagtacctt ttcagaaagg aatcggtcaa aagtttcaac agccgtcagg
      781 aaccggcatt gacttgggat tctttgactt ggactctctt tcgaaaccgt catcagggga
      841 agacgtgtat ccacttgtga tatgtgcaga aacaaccatg cctttatata cacctgatca
      901 aaatctttac aacccgttag caaatacagt tattactacc cctcacatgc agattacgca
      961 agctgttttg gaaaagaata acgagcatcc ttttaaagtg agagttatgc ggcagatatt
     1021 gtggatcgat ggagttcgtt atgagctacg tgagatatac ggaattggga aatctgaaga
     1081 gagttttgat gaaactggat ctggagaaga atgcgttatt tgcatgaccg aacctaagga
     1141 tacggctgta cttccatgtc gacatatgtg tctatgcagt gagtgtgcca aggcattgag
     1201 acttcagtca aacaagtgcc caatctgccg tcaaaatatc gaagaactaa tggagatcaa
     1261 aattaataca gagaatcatc agtagtgata tatccttttc ttctttctga atccaaattc
     1321 atgatacaaa ttatattctt ttcttcttat ctatctaatc tcgtgatgtg atagtttatg
     1381 ttgtatatat gtttgtatgc taaaaaagct gctagcttta tccttctcat ttcatgcttg
     1441 tgttattttt ctatgatgaa tcaacactgt gagccgtaaa gtcaagtcaa tgaactcatt
     1501 ccatctaaat cgatgaacta tggttcacat ggctcggtca ttttttgata ttgaaagagt
     1561 ggtatgttgt gtttttatgt cagagttgaa attaacactt tagccacact acactttttc
     1621 atcttac
//
LOCUS       XM_071885939            2072 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DUF21 domain-containing
            protein At4g14240-like (LOC139904004), transcript variant X1, mRNA.
ACCESSION   XM_071885939
VERSION     XM_071885939.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2072
                     /gene="LOC139904004"
                     /note="DUF21 domain-containing protein At4g14240-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 33 Proteins"
                     /db_xref="GeneID:139904004"
     CDS             167..1645
                     /gene="LOC139904004"
                     /codon_start=1
                     /product="DUF21 domain-containing protein At4g14240-like
                     isoform X1"
                     /protein_id="XP_071742040.1"
                     /db_xref="GeneID:139904004"
                     /translation="MHAINVVQIIRTMSTSSRNSLLGAEIEFGSPMFFVYVGISCFLV
                     IFAGIMSGLTLGLMSLGLVELEILQRSGTPTEKKQAGVIFPVVQKQHQLLVTLLLCNA
                     AAMEALPIYLDKIFNQVVAILLSVTFVLFFGEVIPQAVCTRYGLAIGSSFIWLVKILM
                     IVCYPIAYPIGKMLDLVLGHNDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGA
                     LDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPRNVIGLLL
                     VKSLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKTKGKSRK
                     PPTLEEEEEPNQDKISIQYSQSTTPLLSKQGERSDNVTIDVETSTRVTAQTNGVPYSA
                     EDIEEGEVIGIITLEDVFEELLQEEIVDETDEFVDVHKRIRVAAAAAASSVARAPSVR
                     RLTAIAQGGQIKQGQTPRKSGEDDSTPKLQRPLVEPLLKKET"
     misc_feature    257..>1438
                     /gene="LOC139904004"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only]; Region:
                     TlyC; COG1253"
                     /db_xref="CDD:440865"
ORIGIN      
        1 gttatgtttc ttattccaca atatacaaaa ttttctttca cttcaacatc aacataccga
       61 aatcaatatc atcaaatata tatatcgaat ttctcatcaa attataatta aacatatagt
      121 gtacaattgc ctgtatttat tgattgaata tcaaaatccg tacaggatgc atgccataaa
      181 tgtagtccaa atcatacgaa cgatgagcac tagtagtagg aattcgttac tcggagctga
      241 aatcgaattc ggatcgccta tgttcttcgt ctacgtcgga atctcgtgtt ttttagtcat
      301 tttcgccgga ataatgtccg gccttacgct agggttaatg tctttaggtc tcgttgaact
      361 tgaaatcctt caacgtagcg gtacacctac tgaaaaaaaa caagcaggtg tgatatttcc
      421 agtggtgcag aaacaacacc aacttcttgt aacattgctt ctatgcaatg cagctgcgat
      481 ggaggcgcta ccaatatacc tggataagat ttttaatcaa gttgttgcaa tattactttc
      541 cgtaactttc gttctctttt ttggagaggt gattccacaa gctgtttgta ccagatatgg
      601 attagctata ggttctagtt ttatttggct tgttaagatc ctgatgatag tgtgctatcc
      661 aattgcttat cctataggca agatgcttga tttggtactg ggacataatg atgctctttt
      721 tagacgagct cagttgaaag ccctcgtttc tatccatggc caagaggctg gtaaaggagg
      781 tgaacttact catgatgaga cgacaattat tagtggagca ctagatttaa cagaaaagac
      841 tgcggaggag gctatgacac caattgagtc aactttttcc ttggatgtta attcaaagtt
      901 agattgggaa gcaatgggaa agatacttgc aagaggtcat agtagagtcc ctgtatactc
      961 aggaaaccca agaaatgtta ttggactttt attggtgaaa agtcttctta ctgtacgagc
     1021 agaaacagag actccagtaa gtgcagtctc cattaggaga attccgaggg tgccagccga
     1081 catgccttta tatgacatat tgaatgagtt ccaaaaggga agcagtcata tggcagctgt
     1141 tgtaaaaact aaagggaaaa gcagaaaacc tcctacactt gaagaagaag aagaaccaaa
     1201 tcaagataaa atcagcattc aatattctca atctacaact ccactgctat caaaacaggg
     1261 tgaaagatca gataatgtaa ctattgatgt ggaaacatct acaagagtca ccgcacaaac
     1321 aaatggagtg ccttattcag cagaggacat tgaagaaggt gaagttattg gtataatcac
     1381 cttggaagat gtcttcgagg aacttcttca ggaggagatt gtagatgaga ctgatgaatt
     1441 tgttgatgtg cataaaagga tacgtgtagc tgctgctgcg gctgcttcat ctgtagcccg
     1501 tgctccttct gttaggagat taactgctat tgctcaggga ggccaaatta agcaaggcca
     1561 aacgccaagg aagtctggtg aggatgattc tactccaaag ttgcagaggc ctcttgttga
     1621 gcctttactt aaaaaggaaa cataaactat gcatttgaga tcgaattttg taagccgaat
     1681 tgatgatcag tggccaaaag aggaggccta tggagagcca atcacaacat ataaataaga
     1741 tagattgtgc aagttataga aattgtcaga tggtaatata atagacatgt atcgattttg
     1801 caatttaatt ttgtatgaag ttgaggtcac caattgtaaa gctaataata cctggaggga
     1861 agtgcaagat cttgtgttat gttatcgttg tgcctgttca atagtggtcg gcatatatgt
     1921 tggttaacgt gtacgactgg gttcgggttg gtactttgtt aataatatgt gcatactagc
     1981 ccctgtggtt gatgtttatt gtgtctggta atccggttta gctgaacttt aaagactgtt
     2041 gaacacttga acctggttgc gcataagcat at
//
LOCUS       XM_071885940            2070 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DUF21 domain-containing
            protein At4g14240-like (LOC139904004), transcript variant X2, mRNA.
ACCESSION   XM_071885940
VERSION     XM_071885940.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2070
                     /gene="LOC139904004"
                     /note="DUF21 domain-containing protein At4g14240-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 37 Proteins"
                     /db_xref="GeneID:139904004"
     CDS             167..1642
                     /gene="LOC139904004"
                     /codon_start=1
                     /product="DUF21 domain-containing protein At4g14240-like
                     isoform X2"
                     /protein_id="XP_071742041.1"
                     /db_xref="GeneID:139904004"
                     /translation="MHAINVVQIIRTMSTSSRNSLLGAEIEFGSPMFFVYVGISCFLV
                     IFAGIMSGLTLGLMSLGLVELEILQRSGTPTEKKQAGVIFPVVQKQHQLLVTLLLCNA
                     AAMEALPIYLDKIFNQVVAILLSVTFVLFFGEVIPQAVCTRYGLAIGSSFIWLVKILM
                     IVCYPIAYPIGKMLDLVLGHNDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGA
                     LDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPRNVIGLLL
                     VKSLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKTKGKSRK
                     PPTLEEEEEPNQDKISIQYSQSTTPLLSKQGERSDNVTIDVETSTRVTAQTNGVPYSA
                     EDIEEGEVIGIITLEDVFEELLQEEIVDETDEFVDVHKRIRVAAAAAASSVARAPSVR
                     RLTAIAGGQIKQGQTPRKSGEDDSTPKLQRPLVEPLLKKET"
     misc_feature    257..>1438
                     /gene="LOC139904004"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only]; Region:
                     TlyC; COG1253"
                     /db_xref="CDD:440865"
ORIGIN      
        1 gttatgtttc ttattccaca atatacaaaa ttttctttca cttcaacatc aacataccga
       61 aatcaatatc atcaaatata tatatcgaat ttctcatcaa attataatta aacatatagt
      121 gtacaattgc ctgtatttat tgattgaata tcaaaatccg tacaggatgc atgccataaa
      181 tgtagtccaa atcatacgaa cgatgagcac tagtagtagg aattcgttac tcggagctga
      241 aatcgaattc ggatcgccta tgttcttcgt ctacgtcgga atctcgtgtt ttttagtcat
      301 tttcgccgga ataatgtccg gccttacgct agggttaatg tctttaggtc tcgttgaact
      361 tgaaatcctt caacgtagcg gtacacctac tgaaaaaaaa caagcaggtg tgatatttcc
      421 agtggtgcag aaacaacacc aacttcttgt aacattgctt ctatgcaatg cagctgcgat
      481 ggaggcgcta ccaatatacc tggataagat ttttaatcaa gttgttgcaa tattactttc
      541 cgtaactttc gttctctttt ttggagaggt gattccacaa gctgtttgta ccagatatgg
      601 attagctata ggttctagtt ttatttggct tgttaagatc ctgatgatag tgtgctatcc
      661 aattgcttat cctataggca agatgcttga tttggtactg ggacataatg atgctctttt
      721 tagacgagct cagttgaaag ccctcgtttc tatccatggc caagaggctg gtaaaggagg
      781 tgaacttact catgatgaga cgacaattat tagtggagca ctagatttaa cagaaaagac
      841 tgcggaggag gctatgacac caattgagtc aactttttcc ttggatgtta attcaaagtt
      901 agattgggaa gcaatgggaa agatacttgc aagaggtcat agtagagtcc ctgtatactc
      961 aggaaaccca agaaatgtta ttggactttt attggtgaaa agtcttctta ctgtacgagc
     1021 agaaacagag actccagtaa gtgcagtctc cattaggaga attccgaggg tgccagccga
     1081 catgccttta tatgacatat tgaatgagtt ccaaaaggga agcagtcata tggcagctgt
     1141 tgtaaaaact aaagggaaaa gcagaaaacc tcctacactt gaagaagaag aagaaccaaa
     1201 tcaagataaa atcagcattc aatattctca atctacaact ccactgctat caaaacaggg
     1261 tgaaagatca gataatgtaa ctattgatgt ggaaacatct acaagagtca ccgcacaaac
     1321 aaatggagtg ccttattcag cagaggacat tgaagaaggt gaagttattg gtataatcac
     1381 cttggaagat gtcttcgagg aacttcttca ggaggagatt gtagatgaga ctgatgaatt
     1441 tgttgatgtg cataaaagga tacgtgtagc tgctgctgcg gctgcttcat ctgtagcccg
     1501 tgctccttct gttaggagat taactgctat tgctggaggc caaattaagc aaggccaaac
     1561 gccaaggaag tctggtgagg atgattctac tccaaagttg cagaggcctc ttgttgagcc
     1621 tttacttaaa aaggaaacat aaactatgca tttgagatcg aattttgtaa gccgaattga
     1681 tgatcagtgg ccaaaagagg aggcctatgg agagccaatc acaacatata aataagatag
     1741 attgtgcaag ttatagaaat tgtcagatgg taatataata gacatgtatc gattttgcaa
     1801 tttaattttg tatgaagttg aggtcaccaa ttgtaaagct aataatacct ggagggaagt
     1861 gcaagatctt gtgttatgtt atcgttgtgc ctgttcaata gtggtcggca tatatgttgg
     1921 ttaacgtgta cgactgggtt cgggttggta ctttgttaat aatatgtgca tactagcccc
     1981 tgtggttgat gtttattgtg tctggtaatc cggtttagct gaactttaaa gactgttgaa
     2041 cacttgaacc tggttgcgca taagcatatt
//
LOCUS       XM_071885941            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At5g19025 (LOC139904005), mRNA.
ACCESSION   XM_071885941
VERSION     XM_071885941.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139904005"
                     /note="uncharacterized protein At5g19025; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139904005"
     CDS             141..836
                     /gene="LOC139904005"
                     /codon_start=1
                     /product="uncharacterized protein At5g19025"
                     /protein_id="XP_071742042.1"
                     /db_xref="GeneID:139904005"
                     /translation="MRHNNLSTSFASMTTTNTHHHTHNHKKHSNPNPNISTTSTCTHH
                     SPSATLDILILILVLFSGAFLISSYFSYIFHSLSLILPQLSLSTFIDISSALYLIGFF
                     VFIVISVISFEICCGVRSRKCGKKGCKGLKKAMEFDLQLQTEDVLRSNNSSCCRVNKE
                     IDNLPWKGGSETNPDYECLRTELRKMAPVNGRAVLLFRLKCGCPVAKLEGWGPKRSKR
                     NKKSLSLNGGYHG"
ORIGIN      
        1 aaaaatacga gtcccgtaga agctaacgga cgcacccatc attctcctag aaccttacat
       61 caccaccacc tgtgaaaacc cccaatcacg ccaccgcacc atcaccctca ccactcaagg
      121 accgccgtgc tctcactaac atgcgccata acaacctctc cacttccttc gcctcaatga
      181 ccaccaccaa cactcatcac cacactcaca atcacaaaaa acactcaaac cctaacccta
      241 acatttcaac aacaagcacc tgcacgcacc attcaccatc agcaacccta gacatcttaa
      301 tcctgattct agtcctattc tccggtgcat tcttaatctc atcatacttt agttacatct
      361 ttcattcact ctccctcatc ctccctcaac tttccctctc tacattcatc gacatttcat
      421 ccgctttata cttaattgga ttctttgtat tcatcgttat ttcggtaatt agttttgaga
      481 tctgttgcgg tgtccggtct cgaaagtgtg ggaaaaaagg atgtaaagga ttgaaaaaag
      541 ctatggagtt tgatttacag ttacaaactg aggatgtatt gagatctaat aatagtagtt
      601 gctgtagagt gaataaagag attgataatt tgccttggaa aggaggaagt gaaacgaatc
      661 cggattacga gtgtttgcga accgagttga ggaaaatggc gcctgttaat ggaagagctg
      721 tgttgttgtt taggttgaaa tgtggttgcc ctgttgctaa acttgaaggt tggggaccca
      781 aacgtagcaa gcgaaacaag aagagtttga gtctgaatgg aggatatcat gggtgatact
      841 tgagatgcaa ttggtgttgg tgtcatatgc gtttcttgtt tgtctattat tattaccctt
      901 ctagaaattc ggttgattct tctttctggg ttaaaatatt agaacaactc ttgtaaaacc
      961 atgtttggtt ggtacatcaa cttcttgtca atggttatac tcaattaaat ttgaataaat
     1021 attgaaacat tattagcaca tttacataga attccgcaag cagaaatgaa gcttgtc
//
LOCUS       XM_071885942            4211 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mediator of RNA polymerase
            II transcription subunit 33A-like (LOC139904006), mRNA.
ACCESSION   XM_071885942
VERSION     XM_071885942.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4211
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4211
                     /gene="LOC139904006"
                     /note="mediator of RNA polymerase II transcription subunit
                     33A-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 20 Proteins"
                     /db_xref="GeneID:139904006"
     CDS             105..4025
                     /gene="LOC139904006"
                     /codon_start=1
                     /product="mediator of RNA polymerase II transcription
                     subunit 33A-like"
                     /protein_id="XP_071742043.1"
                     /db_xref="GeneID:139904006"
                     /translation="MAAVSLGTLKLWDSVLEFTKKSQDKGSDPLLWAIHLSSQLNSEG
                     VTLPSTELANLLVSHICWDNNNPISWKFLEKALIFNIVPPLLVLALLSTRVIPKRHTQ
                     QAAFRLYMELLKRHAFKLKSHVEFQNYEMITNSIDDVLHLSQTFGIKVNDPGTLLVEF
                     IFSIVWQLVEAALGDEGLLELIGERKLKWNVPQDMELDVSENYGGKMNEYHETLQSKN
                     TVMAAELIGFFLQNKATSRILFLARRNMPTHWRSFIQDIEVLVVNSSALRKSKVMSPE
                     ILLQLISDDRKLVTEGKKSNYLHEMHTLMSSSAGISRKVSGSSLWIPLDLVLEDAMDG
                     SQVDTTSAIEIVTRFVKALQAFNGTTWHETFLGLWMAALRLVQRERDPIEGPMPRVDT
                     RMCMLLSVTTLVVSDLVEEEESTPQNNVNCQTTESSKEKRRMELVSSLQSLGDYQSLL
                     TPPQSIVPAANQAAAKAMMLISGINIGSSAYFDLVNMKDMAINISGNLHHLIVEACIA
                     RNLLDTSAYYWPGYVTGRINQIPHSMPAQVPGWSTFMKGAPLTPVMVNALASEPASSL
                     AEIEKVFEIAVNGSDDEKIAAATILCGASLIRGWNVQEHSMYFTTRLLSPPPPANYSG
                     NESYLISYAPMLNVLLVGIAPIDCVQMFSLHGLIPQLAGSLMPICEAFGSCGPRSWTL
                     TTGEEISAHALFSNAFALLLKLWRFNHPPLEYGVGDVPPVGSQLTPEYLLLSRNSQLV
                     SNGAYEDRNRRRLSVVAKTSCPNPIFVDSFPKLKAWYRQHQACLAATLSGIVHSPVHQ
                     IVDSLLNMIFTKINKKQTLNSVSGSSTSSSPGSEDASLRPKLPAWDVLEAVPFVVDAA
                     LTACAHGRLSPRELCTGLKDLADFLPASLAIIVSYFSAEVSRGVWKPVFMNGTDWPSP
                     AANLSNVEEHIKNILAATNVNVPRLFAGIRSPFTLPLPLAAFVSLTITYKLDKASQRF
                     LNLAGPALESLAAGCPWPCMPIVAALWSQKAKKWSDFLVFSSSRTVFLHDNDAVTQLL
                     KSCFTVTLGLNYSLVSSQGGVGALLGHGFGSNFYGEISPVAPGFLYLRVYRSIRDIMF
                     LREDIISLMMQCVKDIASSTGKTPKRKHETRYGQVSLATSLTKVKLGAQLGASILWIS
                     GGQGLVQSLIQETLPSWFISVHKTEQEEIGGAVSMLSGYALAYFTVLCGAFAWGVDSS
                     LSASKWRPKTLGSHMEFLAGALNGKITLGCDPITWHSYVTAFVNLMVSCVPNWVMEVD
                     VEVLKRLCKGLRQWNEEELALKLLEAGGVGTMGAAAELISQTDS"
ORIGIN      
        1 ttccaaaaat tcacaccatt ttacacgcac caacccaaag cccacacttt gtaattttgt
       61 ttctctatta tgaagagata gacagtatat atgctatatt aataatggct gcagtgtcct
      121 tagggacctt gaaattatgg gacagtgtcc ttgagtttac caaaaaatca caagataaag
      181 gcagtgatcc attattatgg gcaattcatc tttcttctca attaaactca gaaggtgtaa
      241 ctcttccttc aacagaatta gcaaatcttt tggtttctca catttgttgg gacaacaaca
      301 atcccatttc atggaagttt ctagaaaaag cattgatctt caatatagtt cctcctctgc
      361 ttgttcttgc ccttctatct accagggtca ttccgaagcg acatacccaa caagcagcat
      421 ttcgactata tatggagctc cttaaaagac atgcttttaa actcaaatca catgtggaat
      481 ttcaaaatta tgaaatgatc acaaattcaa tagacgatgt tctccatctt tctcagacat
      541 ttggtatcaa agtcaatgat cctggcactt tattagtcga gttcatcttt tcgattgttt
      601 ggcagttggt agaggcagca ttaggagatg aagggcttct agaacttatc ggagaacgaa
      661 aattgaaatg gaatgttcct caagatatgg agttagatgt ttctgaaaat tatggtggaa
      721 aaatgaatga ataccatgaa acactgcaaa gtaaaaatac cgttatggct gcagaattaa
      781 tcggcttttt cttgcaaaat aaagcaactt ccaggatcct attcttggct cgacgcaaca
      841 tgcctacaca ttggagaagt tttattcagg acattgaggt tcttgtggtc aactcttcag
      901 cacttagaaa gtcaaaggtg atgtcaccgg aaattctgct tcaattgata tcggatgatc
      961 gtaaacttgt gactgaggga aaaaaatcga attacttgca tgaaatgcat acgttaatgt
     1021 catcgtctgc tggtatttct cgtaaagtta gtggttcttc tctatggatt cctcttgatc
     1081 ttgtgcttga agatgcaatg gatggttcac aagttgatac aacaagcgcc attgaaatcg
     1141 ttacacgttt tgtaaaagct cttcaagcct ttaatggcac cacctggcat gagacttttc
     1201 ttggtctttg gatggccgct cttcgtcttg ttcaaaggga aagagatccg attgagggtc
     1261 ccatgcctcg cgtggatact cgcatgtgca tgttattgtc tgttactact ctagtggttt
     1321 ctgatctagt cgaagaagag gaaagtacgc cacaaaacaa cgtaaattgt caaacgacag
     1381 aaagctcaaa agaaaagcgt cgtatggagt tggtgtctag cttacaaagt ttgggcgatt
     1441 atcagagctt gctgactcct cctcaatcaa ttgtacctgc tgccaatcag gctgctgcga
     1501 aagcaatgat gctcatttcg ggcattaata ttggtagtag tgcttacttc gacctcgtca
     1561 acatgaaaga tatggcaatt aacatttctg gaaacttgca ccatctgata gttgaggcct
     1621 gcattgccag aaatctgttg gacacgtcag cgtattattg gccgggttac gttacgggtc
     1681 ggattaacca aatacctcat agcatgcctg ctcaagtgcc tggatggtca acatttatga
     1741 aaggagcacc tctcacacct gttatggtaa atgctcttgc ttctgaacca gcttcaagct
     1801 tagcagagat tgaaaaggtc tttgagattg cagtcaatgg ttcagatgat gagaaaatag
     1861 ccgctgctac tattctctgt ggtgcctcgc taattcgagg ttggaatgta caggagcata
     1921 gtatgtactt cactaccaga ttgttatcac ctccaccgcc agctaactat tcaggcaacg
     1981 aaagctatct gatatcttat gctccaatgc tgaatgtcct tctggttggt atagcgccca
     2041 tcgactgtgt tcagatgttc tctttacatg gacttattcc acaacttgct ggttctctaa
     2101 tgccaatctg tgaagctttc gggtcatgcg gacccagatc atggaccctc acaacaggag
     2161 aagaaatatc cgcccacgcc ttgttctcaa atgcatttgc acttctttta aagctatgga
     2221 gattcaatca tcctccttta gaatacggag ttggagacgt tccacccgtg ggctctcaac
     2281 tcactcccga atacttacta ctatcgcgaa attctcagtt agtatctaac ggtgcatacg
     2341 aagaccgaaa cagaagacga ctatctgtag ttgcaaaaac atcttgtcct aatcccatat
     2401 tcgttgactc atttccgaaa ctaaaagcat ggtatcgtca acatcaagcg tgtttagctg
     2461 caacgctttc tgggattgtt cattcacctg ttcatcaaat cgttgatagc cttctaaata
     2521 tgatatttac aaagatcaat aagaaacaaa cactgaattc ggtatctgga agtagtactt
     2581 catctagtcc aggaagtgaa gatgcgtcat taagaccgaa attacctgct tgggatgttc
     2641 tcgaagctgt tccgtttgtg gttgatgcgg ctctgaccgc gtgtgcacat ggcagattgt
     2701 cgcctcgcga gctgtgtact ggactcaaag atttggcaga ctttcttcca gcatcgttag
     2761 cgattattgt gagttacttc tcggctgaag tgtctcgtgg tgtttggaaa ccggtgttta
     2821 tgaatggaac cgactggcca agtccagctg caaatctttc taatgttgaa gagcatatca
     2881 agaatatttt ggctgccact aatgttaacg ttccacgcct ttttgcagga atacgttctc
     2941 catttactct tccgttacct ttggctgcat ttgtgagcct caccataacc tacaaactcg
     3001 acaaagcatc tcaacggttt ctaaatcttg ctggaccggc cttagaatcg cttgcagctg
     3061 gttgtccatg gccatgtatg ccgattgtgg cagccttatg gtcacaaaag gcgaaaaaat
     3121 ggagtgactt tctggtcttt tcatcttcgc gtacagtttt ccttcatgat aatgatgcag
     3181 taactcagct tcttaaaagt tgcttcactg tcacacttgg cttgaattat tctcttgttt
     3241 caagccaagg tggcgttgga gcacttctcg ggcatggatt tgggtccaat ttttacgggg
     3301 agatatctcc cgtggcaccg ggattcctat atttgcgagt ttatcgttcc ataagagaca
     3361 tcatgttcct tagagaagat attatctcat tgatgatgca atgtgttaaa gatatagctt
     3421 cttctactgg taaaactcct aaacgtaaac atgaaacaag gtacggacaa gtttcacttg
     3481 ctactagttt gaccaaagtc aaactaggcg ctcaattagg tgcttcgata ttatggatat
     3541 ctggaggaca gggattggtt caatctttaa tacaagagac gttaccgtct tggtttatat
     3601 ctgttcacaa gaccgagcaa gaggaaattg gtggagcggt ttcaatgctg tcagggtatg
     3661 cgttggcgta ttttactgtg ctttgtggtg cattcgcgtg gggtgttgac tcgtccctgt
     3721 cagcatccaa gtggcgtcct aaaactcttg ggtcacatat ggagttttta gcaggtgcac
     3781 ttaacgggaa gataacactt ggttgtgacc caatcacctg gcattcgtat gtaacggcat
     3841 tcgttaacct gatggtcagt tgtgtaccaa attgggtaat ggaagttgat gtagaggttt
     3901 tgaagaggtt atgtaaaggg ttgaggcaat ggaatgagga agagcttgca cttaaactat
     3961 tggaggctgg cggtgttggt acgatgggtg cagctgctga actcattagt caaactgatt
     4021 cttagtgttt tgtgaattat atagaataga tagcatagat ttcggttttt atcacaagtt
     4081 ttgtaaattg ttggtgcatc tgtactttag atttagctgt acatctgtta attatcagcg
     4141 tgagcatgga aatcttgatt taattttatc ccaaattgag caaaactgtt acagtgagta
     4201 ttaaacaaaa a
//
LOCUS       XR_011778623            1000 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904007), ncRNA.
ACCESSION   XR_011778623
VERSION     XR_011778623.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1000
                     /gene="LOC139904007"
                     /note="uncharacterized LOC139904007; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904007"
     ncRNA           1..1000
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904007"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904007"
ORIGIN      
        1 caccaactac tataatgatc tcgacgacag aaatcgtgtc tgcagatact gtggtgcctt
       61 cttctggtat gaagagcgcc taagatatcc gtctgcaaac ctttctttta atcgttgctg
      121 ccaaggtcgt cgtgtcgatc tgccgagaaa ggtggtagtt gctaccattg gattcgcaaa
      181 gttgcccagt aatactctta caatgatact aacgaaaatt tctgaaagtc taattcaact
      241 gactcaacag ctatctgcag aaaatggtat attcttggtc agattatttg ttcaatatta
      301 ctatgcctta tgttttttaa tgatgtgtta gtaatgctat ttttttcaag ttgcagttgg
      361 ttattttgac actatagatc aactgttgtt cgtacaaagt ggtatactcc tatttgcttt
      421 ctttcgagca ttataatggg ttattttttc gttaatactc ctacgttttt tatatatttt
      481 tgcagctgct gatggtatgt tttgatttgc atattaggtg ttttgctgga taagtatcaa
      541 ctctaactca atatctccat attttattgt agaaatattt tttttgccaa caatgttatc
      601 gacaatcagt ttttacaact ccctaatgat attggtaatc gttggtcggt gggcacaaca
      661 acttttggct cgcgttctta gacagattgt tagtttcgtt ccgtgctcag gatgtttcaa
      721 gtatattgga agtttaaggt gaatcgatga catgattgaa gccattccta gccaacatag
      781 tttttgaaag agtctgcctt tacaaaccgt gtggtatgat agtatgtaac aactggagtc
      841 gatgataacg atgataactt tgttgtatag ttttggtggc atgttgtcac ctaccgttta
      901 atgacaccat aatataattt gtaatataga aagctaatat gttatctaag aaatgtaaac
      961 gagttcaccg ccgtaacgcg cggtggacca aatgctagtt
//
LOCUS       XM_071885943            1092 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            endo-1,3;1,4-beta-D-glucanase-like (LOC139904008), mRNA.
ACCESSION   XM_071885943
VERSION     XM_071885943.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1092
                     /gene="LOC139904008"
                     /note="endo-1,3;1,4-beta-D-glucanase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139904008"
     CDS             5..793
                     /gene="LOC139904008"
                     /codon_start=1
                     /product="endo-1,3;1,4-beta-D-glucanase-like"
                     /protein_id="XP_071742044.1"
                     /db_xref="GeneID:139904008"
                     /translation="MVLTIDPKTCSTNYTSIFHMSGPACCDNPPAAASSGSESGEVVQ
                     IASLNSYISGNNDSKVSVILASDVYGYEAPKLRILADKIASAGYYVVVPDFFDGHPFI
                     PKTHLPDWIKIHPTKPAVELAKRVVQALKEKGISKIGAAGFCWGAKVVVELAKDADIE
                     AAALLHPTFVTLDDIKGVKVPVAVLGAEIDRISPPEVVKQFKAALQAKPEVDHFVKIY
                     PGVSHGWTVRYRDEDITSTKYAQEAHQDLLDWFGKCFKTTHSAL"
     misc_feature    188..760
                     /gene="LOC139904008"
                     /note="Dienelactone hydrolase [Secondary metabolites
                     biosynthesis, transport and catabolism]; Region: DLH;
                     COG0412"
                     /db_xref="CDD:440181"
ORIGIN      
        1 ccggatggta ttgactattg acccaaaaac ttgctccaca aactacacca gtatctttca
       61 tatgtctggc ccagcctgct gtgacaaccc acctgcggca gcctcctccg gcagtgaatc
      121 cggcgaggtt gtgcagattg cctccttgaa ttcatatata tccggcaaca atgattcaaa
      181 agtatctgtt attcttgctt ctgatgttta tggttatgaa gctccaaaat tgaggatact
      241 tgcagacaaa attgcatctg ctggatatta tgtagttgtt cctgattttt ttgatggtca
      301 tccttttatt cctaaaactc atttaccaga ttggattaaa attcatccca cgaaacctgc
      361 agttgaatta gcaaaacggg ttgttcaggc tctcaaagaa aagggtatat ctaaaattgg
      421 cgctgcaggt ttttgttggg gtgccaaggt cgttgtagag ctcgcaaagg atgctgatat
      481 agaagctgct gcactcttgc atcctacttt tgtcacttta gatgatatca agggtgttaa
      541 ggttccagtt gcagtactag gggcagagat tgatagaata tctcctccgg aagttgttaa
      601 acagtttaag gctgcgttgc aagccaaacc tgaggttgat cattttgtga aaatatatcc
      661 aggtgtatct catggttgga ctgtccgata tagagatgaa gacattacat ctacgaaata
      721 tgcacaagag gcacatcagg atcttttgga ttggtttggt aagtgcttta agacgactca
      781 ttcggccctc taaagcgcaa atcatgaaac aacagagcga taaagacgta tgaaagcctc
      841 attagaacta taaagttgtg tttgaagatg ctatgtcaca tgttcaattc tttgtgcaaa
      901 taattagtta tttagcttat ccaaggttga gtttatattc ttgattttga agatgctata
      961 agataatttc aggctcatat caagcgactt catctgttat catttatgaa ttgatgtgac
     1021 tagttttatt tggtgaaatg atttgggtta cgtgtaatct gtttttttta acatataaac
     1081 tgggtgtgat aa
//
LOCUS       XR_011778624            1967 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904009), transcript variant X1, ncRNA.
ACCESSION   XR_011778624
VERSION     XR_011778624.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1967
                     /gene="LOC139904009"
                     /note="uncharacterized LOC139904009; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904009"
     ncRNA           1..1967
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904009"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904009"
ORIGIN      
        1 tttctaattt tttttttatt ttaaaaacca actaaaatta cgaattatcc tccgttccac
       61 aatttttttc accgaaccct ctccattctt ttcatctcct tcatcctcct ttctgctatt
      121 atcgccgaac acggtttccc aaggagtgat aaaccttaaa ttactgcacg cttattcaat
      181 tagtacccat tcttggtagt tacaaccaca ccgttaccat ctccgtcgca accacgtcgc
      241 cttatccccg gttgtaatcc aatctgtcac atccaccgtt gttgtttcca ccgtcgtggt
      301 aagtgaattc tcttttgtta cgattttgta aaagttaggg ttttaagatt tgccgatcaa
      361 aatgacggac gaatgtttaa cagattttgt aaaagttagg gtttcaagat ttggatcaac
      421 agatttgttc gttatttaat atgctgaatt gagaaaatca tttttatatt tatgttaagc
      481 ttttttctta acatttggtt taatttatgt ggttggatat tcctttatat ttgattcatt
      541 gtaggtcgtc tgagtttttg ttcagcaatt gggaatagac ttctctaata tgttgttcat
      601 ccagcgattt ctccaatttg taattatatt tgattctttt atttttttct tacaattttt
      661 gattttactt aatattgaga tttatttttt ctagggtttg gtgatttcct gatatgagga
      721 atgaatagaa cagtcacaag agctgcttga tttctttata tgtagtgttg aggtatatat
      781 ttgagttatc atttgtatca atagatctta agaaccatgt gtgtgtaggc tctattttat
      841 ttttttcaaa gtctgttaga ctctgctgat ggaatcccaa ttgttggtgc ttgacatttg
      901 gtacaagtat atgtgtaata tgaatgccat ttgtggtggg atctgaaata attggctgtt
      961 tcatttcaca atgtctttga agtaaatttt gaatcataga ttgactgatt tgttggtaca
     1021 tgtgtatgtt attcatttac atgtacatgg tatctttacc catttactga tttacatact
     1081 aattaatgag actaagtcag gtacaggtac atggtatctt tacccattta catactaata
     1141 gatgttaaag gtatataaaa caaaggtggc tatctttacc catttataga atgatatgtt
     1201 aaagatatac aagaaatggg ctatccttac ccatttacac agtgatagat ggatctgaat
     1261 tgcgcattct ctccaagttg gtgtctcggt actgttacta cgaatattgg cgatatagca
     1321 aaggttggta gcgatgctca ctcagaaaga tccgtaccta caactacaag gacaataggg
     1381 ttactgacca cagattaaaa atgaacttcg agctcacttc atttcttgac ggtgatatag
     1441 acacacctat tcaggtatag aaccagtcac ataaatgtta gtaaatcgtg tattacacga
     1501 gatcgagaag atactacaag gcaatacttt gtaggttctt tgcgatattt ggagatcggg
     1561 tggtcttccg tgtgagaaat ctgagcatca aagacatgtt ttttttgcag ctgttgatct
     1621 tgaatatcag ggttataaat ttgtaaaaaa cgaacaagga aatctggacc agtactttga
     1681 aaatgtagta ttcaaggttg aaaacctact aacttcaagt aacgcaatag cttatagctg
     1741 gaagacatgg cggtcctttt atctataaat acattccttt ttagtctagc atagtagttg
     1801 ttagtgatgt tagtgtttta tctcttatgc cattaactat gttactttat ttgttctaat
     1861 ttcattttga ggtagtacca tcatttgttt gtgggttgtt gagtatacca aattgttatg
     1921 gagtgaattt aaggatatgt gatggtatta tttcagtaag tcaaaca
//
LOCUS       XR_011778625            1759 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904009), transcript variant X2, ncRNA.
ACCESSION   XR_011778625
VERSION     XR_011778625.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1759
                     /gene="LOC139904009"
                     /note="uncharacterized LOC139904009; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904009"
     ncRNA           1..1759
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904009"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904009"
ORIGIN      
        1 ccaatcgcca catgtcttca ttctctgatt ttctaatttt ttttttattt taaaaaccaa
       61 ctaaaattac gaattatcct ccgttccaca atttttttca ccgaaccctc tccattcttt
      121 tcatctcctt catcctcctt tctgctatta tcgccgaaca cggtttccca aggagtgata
      181 aaccttaaat tactgcacgc ttattcaatt agtacccatt cttggtagtt acaaccacac
      241 cgttaccatc tccgtcgcaa ccacgtcgcc ttatccccgg ttgtaatcca atctgtcaca
      301 tccaccgttg ttgtttccac cgtcgtggtc gtctgagttt ttgttcagca attgggaata
      361 gacttctcta atatgttgtt catccagcga tttctccaat ttgtaattat atttgattct
      421 tttatttttt tcttacaatt tttgatttta cttaatattg agatttattt tttctagggt
      481 ttggtgattt cctgatatga ggaatgaata gaacagtcac aagagctgct tgatttcttt
      541 atatgtagtg ttgaggtata tatttgagtt atcatttgta tcaatagatc ttaagaacca
      601 tgtgtgtgta ggctctattt tatttttttc aaagtctgtt agactctgct gatggaatcc
      661 caattgttgg tgcttgacat ttggtacaag tatatgtgta atatgaatgc catttgtggt
      721 gggatctgaa ataattggct gtttcatttc acaatgtctt tgaagtaaat tttgaatcat
      781 agattgactg atttgttggt acatgtgtat gttattcatt tacatgtaca tggtatcttt
      841 acccatttac tgatttacat actaattaat gagactaagt caggtacagg tacatggtat
      901 ctttacccat ttacatacta atagatgtta aaggtatata aaacaaaggt ggctatcttt
      961 acccatttat agaatgatat gttaaagata tacaagaaat gggctatcct tacccattta
     1021 cacagtgata gatggatctg aattgcgcat tctctccaag ttggtgtctc ggtactgtta
     1081 ctacgaatat tggcgatata gcaaaggttg gtagcgatgc tcactcagaa agatccgtac
     1141 ctacaactac aaggacaata gggttactga ccacagatta aaaatgaact tcgagctcac
     1201 ttcatttctt gacggtgata tagacacacc tattcaggta tagaaccagt cacataaatg
     1261 ttagtaaatc gtgtattaca cgagatcgag aagatactac aaggcaatac tttgtaggtt
     1321 ctttgcgata tttggagatc gggtggtctt ccgtgtgaga aatctgagca tcaaagacat
     1381 gttttttttg cagctgttga tcttgaatat cagggttata aatttgtaaa aaacgaacaa
     1441 ggaaatctgg accagtactt tgaaaatgta gtattcaagg ttgaaaacct actaacttca
     1501 agtaacgcaa tagcttatag ctggaagaca tggcggtcct tttatctata aatacattcc
     1561 tttttagtct agcatagtag ttgttagtga tgttagtgtt ttatctctta tgccattaac
     1621 tatgttactt tatttgttct aatttcattt tgaggtagta ccatcatttg tttgtgggtt
     1681 gttgagtata ccaaattgtt atggagtgaa tttaaggata tgtgatggta ttatttcagt
     1741 aagtcaaaca tgcatgcat
//
LOCUS       XR_011778626            1680 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904009), transcript variant X3, ncRNA.
ACCESSION   XR_011778626
VERSION     XR_011778626.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1680
                     /gene="LOC139904009"
                     /note="uncharacterized LOC139904009; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904009"
     ncRNA           1..1680
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904009"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904009"
ORIGIN      
        1 atcgccacat gtcttcattc tctgattttc taattttttt tttattttaa aaaccaacta
       61 aaattacgaa ttatcctccg ttccacaatt tttttcaccg aaccctctcc attcttttca
      121 tctccttcat cctcctttct gctattatcg ccgaacacgg tttcccaagg agtgataaac
      181 cttaaattac tgcacgctta ttcaattagt acccattctt ggtagttaca accacaccgt
      241 taccatctcc gtcgcaacca cgtcgcctta tccccggttg taatccaatc tgtcacatcc
      301 accgttgttg tttccaccgt cgtggtcgtc tgagtttttg ttcagcaatt gggaatagac
      361 ttctctaata tgttgttcat ccagcgattt ctccaatttg gtttggtgat ttcctgatat
      421 gaggaatgaa tagaacagtc acaagagctg cttgatttct ttatatgtag tgttgaggta
      481 tatatttgag ttatcatttg tatcaataga tcttaagaac catgtgtgtg taggctctat
      541 tttatttttt tcaaagtctg ttagactctg ctgatggaat cccaattgtt ggtgcttgac
      601 atttggtaca agtatatgtg taatatgaat gccatttgtg gtgggatctg aaataattgg
      661 ctgtttcatt tcacaatgtc tttgaagtaa attttgaatc atagattgac tgatttgttg
      721 gtacatgtgt atgttattca tttacatgta catggtatct ttacccattt actgatttac
      781 atactaatta atgagactaa gtcaggtaca ggtacatggt atctttaccc atttacatac
      841 taatagatgt taaaggtata taaaacaaag gtggctatct ttacccattt atagaatgat
      901 atgttaaaga tatacaagaa atgggctatc cttacccatt tacacagtga tagatggatc
      961 tgaattgcgc attctctcca agttggtgtc tcggtactgt tactacgaat attggcgata
     1021 tagcaaaggt tggtagcgat gctcactcag aaagatccgt acctacaact acaaggacaa
     1081 tagggttact gaccacagat taaaaatgaa cttcgagctc acttcatttc ttgacggtga
     1141 tatagacaca cctattcagg tatagaacca gtcacataaa tgttagtaaa tcgtgtatta
     1201 cacgagatcg agaagatact acaaggcaat actttgtagg ttctttgcga tatttggaga
     1261 tcgggtggtc ttccgtgtga gaaatctgag catcaaagac atgttttttt tgcagctgtt
     1321 gatcttgaat atcagggtta taaatttgta aaaaacgaac aaggaaatct ggaccagtac
     1381 tttgaaaatg tagtattcaa ggttgaaaac ctactaactt caagtaacgc aatagcttat
     1441 agctggaaga catggcggtc cttttatcta taaatacatt cctttttagt ctagcatagt
     1501 agttgttagt gatgttagtg ttttatctct tatgccatta actatgttac tttatttgtt
     1561 ctaatttcat tttgaggtag taccatcatt tgtttgtggg ttgttgagta taccaaattg
     1621 ttatggagtg aatttaagga tatgtgatgg tattatttca gtaagtcaaa catgcatgca
//
LOCUS       XR_011778627            1602 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904009), transcript variant X4, ncRNA.
ACCESSION   XR_011778627
VERSION     XR_011778627.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139904009"
                     /note="uncharacterized LOC139904009; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904009"
     ncRNA           1..1602
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904009"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904009"
ORIGIN      
        1 gccacatgtc ttcattctct gattttctaa tttttttttt attttaaaaa ccaactaaaa
       61 ttacgaatta tcctccgttc cacaattttt ttcaccgaac cctctccatt cttttcatct
      121 ccttcatcct cctttctgct attatcgccg aacacggttt cccaaggagt gataaacctt
      181 aaattactgc acgcttattc aattagtacc cattcttggt agttacaacc acaccgttac
      241 catctccgtc gcaaccacgt cgccttatcc ccggttgtaa tccaatctgt cacatccacc
      301 gttgttgttt ccaccgtcgt gggtttggtg atttcctgat atgaggaatg aatagaacag
      361 tcacaagagc tgcttgattt ctttatatgt agtgttgagg tatatatttg agttatcatt
      421 tgtatcaata gatcttaaga accatgtgtg tgtaggctct attttatttt tttcaaagtc
      481 tgttagactc tgctgatgga atcccaattg ttggtgcttg acatttggta caagtatatg
      541 tgtaatatga atgccatttg tggtgggatc tgaaataatt ggctgtttca tttcacaatg
      601 tctttgaagt aaattttgaa tcatagattg actgatttgt tggtacatgt gtatgttatt
      661 catttacatg tacatggtat ctttacccat ttactgattt acatactaat taatgagact
      721 aagtcaggta caggtacatg gtatctttac ccatttacat actaatagat gttaaaggta
      781 tataaaacaa aggtggctat ctttacccat ttatagaatg atatgttaaa gatatacaag
      841 aaatgggcta tccttaccca tttacacagt gatagatgga tctgaattgc gcattctctc
      901 caagttggtg tctcggtact gttactacga atattggcga tatagcaaag gttggtagcg
      961 atgctcactc agaaagatcc gtacctacaa ctacaaggac aatagggtta ctgaccacag
     1021 attaaaaatg aacttcgagc tcacttcatt tcttgacggt gatatagaca cacctattca
     1081 ggtatagaac cagtcacata aatgttagta aatcgtgtat tacacgagat cgagaagata
     1141 ctacaaggca atactttgta ggttctttgc gatatttgga gatcgggtgg tcttccgtgt
     1201 gagaaatctg agcatcaaag acatgttttt tttgcagctg ttgatcttga atatcagggt
     1261 tataaatttg taaaaaacga acaaggaaat ctggaccagt actttgaaaa tgtagtattc
     1321 aaggttgaaa acctactaac ttcaagtaac gcaatagctt atagctggaa gacatggcgg
     1381 tccttttatc tataaataca ttccttttta gtctagcata gtagttgtta gtgatgttag
     1441 tgttttatct cttatgccat taactatgtt actttatttg ttctaatttc attttgaggt
     1501 agtaccatca tttgtttgtg ggttgttgag tataccaaat tgttatggag tgaatttaag
     1561 gatatgtgat ggtattattt cagtaagtca aacatgcatg ca
//
LOCUS       XM_071885944            1018 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            endo-1,3;1,4-beta-D-glucanase (LOC139904011), transcript variant
            X1, mRNA.
ACCESSION   XM_071885944
VERSION     XM_071885944.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1018
                     /gene="LOC139904011"
                     /note="endo-1,3;1,4-beta-D-glucanase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139904011"
     CDS             41..748
                     /gene="LOC139904011"
                     /codon_start=1
                     /product="endo-1,3;1,4-beta-D-glucanase isoform X1"
                     /protein_id="XP_071742045.1"
                     /db_xref="GeneID:139904011"
                     /translation="MSGPECCENPPALAVGEQNGEVKQIASLNSYVSGDPNSKIAVVL
                     ISDIWGYEAPKLRNIADKVASAGYYTVVPDFFHGDPMTPGTQISDWLKNHAPEQGVGL
                     AKPVVQALKEKGASKVGAAGFCWGAKVVVELAKDADIEVAALLHPSFVSLDDIKGVKV
                     PIAILGAEIDKMSPPEVVKEFEAALKAKPEVDHFVKIYPGVSHGWTCRYKDEDEAEVK
                     TAVEAHHDLVEWFGKRF"
     misc_feature    161..736
                     /gene="LOC139904011"
                     /note="Dienelactone hydrolase [Secondary metabolites
                     biosynthesis, transport and catabolism]; Region: DLH;
                     COG0412"
                     /db_xref="CDD:440181"
     polyA_site      1018
                     /gene="LOC139904011"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gactcgaaaa catactccag aaaccacccg aaatcctgaa atgtctggcc cagaatgctg
       61 cgaaaaccct ccggcgcttg ccgtcggcga acaaaatgga gaagttaagc agatcgcttc
      121 tctcaattct tatgtttccg gcgatcctaa ttcgaaaatc gctgtcgttc ttatttctga
      181 tatttggggt tatgaagctc caaagttgag gaacattgca gacaaagttg catctgctgg
      241 atattataca gttgttcctg atttcttcca tggtgacccc atgactcctg gaactcagat
      301 tagtgattgg ctaaaaaatc atgctccgga gcaaggagtt ggattagcga aaccggttgt
      361 tcaagctctc aaagagaagg gtgcatctaa agttggggct gcaggtttct gctggggtgc
      421 caaggtcgtt gtagagctag caaaggatgc tgatatagaa gttgcggcac tattgcatcc
      481 ttcatttgtc agtttagatg atatcaaggg agttaaggtc cctatcgcaa tactaggtgc
      541 cgagatcgat aaaatgtctc cgccagaggt cgtgaaagaa ttcgaggctg cgctgaaagc
      601 caaacctgag gttgatcact ttgtgaagat atatcctggg gtgtcacatg gttggacctg
      661 tcgatataaa gatgaagatg aagcagaagt gaaaactgca gtagaggctc atcatgatct
      721 tgtcgagtgg tttggcaagc gtttctagac aaaccatttg accctgtata aactgtatcg
      781 tgtgatgtaa tatgcggtgt cagatatttg aggacctccg tttatttagc taaataaata
      841 aatcgcattt gaactctttg tatttgtgct tattagctta atacaaagtt aagtttagct
      901 ctactatgag tttgtaaggt gatcatttta gcattatact gcgcatcaaa ggttccaaaa
      961 tagtcgtagt actgtgttat ttttacattt ttataaaaag aataaattac tatccatt
//
LOCUS       XM_071885945             935 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            endo-1,3;1,4-beta-D-glucanase (LOC139904011), transcript variant
            X2, mRNA.
ACCESSION   XM_071885945
VERSION     XM_071885945.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..935
                     /gene="LOC139904011"
                     /note="endo-1,3;1,4-beta-D-glucanase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904011"
     CDS             48..665
                     /gene="LOC139904011"
                     /codon_start=1
                     /product="endo-1,3;1,4-beta-D-glucanase isoform X2"
                     /protein_id="XP_071742046.1"
                     /db_xref="GeneID:139904011"
                     /translation="MSGPECCENPPALAVGEQNGEVKQIASLNSYVSGDPNSKIAVVL
                     ISDIWGYEAPKLRNIADKVASAGYYTVVPDFFHGDPMTPGTQISDWLKNHAPEQGVGL
                     AKPVVQALKEKGASKVGAAGFCWGGVKVPIAILGAEIDKMSPPEVVKEFEAALKAKPE
                     VDHFVKIYPGVSHGWTCRYKDEDEAEVKTAVEAHHDLVEWFGKRF"
     misc_feature    168..653
                     /gene="LOC139904011"
                     /note="Dienelactone hydrolase [Secondary metabolites
                     biosynthesis, transport and catabolism]; Region: DLH;
                     COG0412"
                     /db_xref="CDD:440181"
     polyA_site      935
                     /gene="LOC139904011"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggtttgac tcgaaaacat actccagaaa ccacccgaaa tcctgaaatg tctggcccag
       61 aatgctgcga aaaccctccg gcgcttgccg tcggcgaaca aaatggagaa gttaagcaga
      121 tcgcttctct caattcttat gtttccggcg atcctaattc gaaaatcgct gtcgttctta
      181 tttctgatat ttggggttat gaagctccaa agttgaggaa cattgcagac aaagttgcat
      241 ctgctggata ttatacagtt gttcctgatt tcttccatgg tgaccccatg actcctggaa
      301 ctcagattag tgattggcta aaaaatcatg ctccggagca aggagttgga ttagcgaaac
      361 cggttgttca agctctcaaa gagaagggtg catctaaagt tggggctgca ggtttctgct
      421 ggggtggagt taaggtccct atcgcaatac taggtgccga gatcgataaa atgtctccgc
      481 cagaggtcgt gaaagaattc gaggctgcgc tgaaagccaa acctgaggtt gatcactttg
      541 tgaagatata tcctggggtg tcacatggtt ggacctgtcg atataaagat gaagatgaag
      601 cagaagtgaa aactgcagta gaggctcatc atgatcttgt cgagtggttt ggcaagcgtt
      661 tctagacaaa ccatttgacc ctgtataaac tgtatcgtgt gatgtaatat gcggtgtcag
      721 atatttgagg acctccgttt atttagctaa ataaataaat cgcatttgaa ctctttgtat
      781 ttgtgcttat tagcttaata caaagttaag tttagctcta ctatgagttt gtaaggtgat
      841 cattttagca ttatactgcg catcaaaggt tccaaaatag tcgtagtact gtgttatttt
      901 tacattttta taaaaagaat aaattactat ccatt
//
LOCUS       XM_071885946            1974 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904012), mRNA.
ACCESSION   XM_071885946
VERSION     XM_071885946.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1974
                     /gene="LOC139904012"
                     /note="uncharacterized LOC139904012; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139904012"
     CDS             102..1751
                     /gene="LOC139904012"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742047.1"
                     /db_xref="GeneID:139904012"
                     /translation="MEQLINFIIRPPRAEYEPNNDLLDQEFMLKGKWFQRKDIEIVNS
                     RGDVLQCSHYLPIVSPEGKPLPCVIYCHGNSGCRADASEAAIILLPSNITVFTLDFSG
                     SGLSGGEHVSLGWYEKNDLKSVVDYLRADENVSLIGLWGRSMGAVTSLMYGAEDPSIA
                     GMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRRAILKKAKFDIVELNTIKV
                     AKSSFVPVLFGHACDDDFIQPHHSDRIYEAYMGDKNIIKFEGDHNSPRPQFYFDSINI
                     FFHNVLQPPEDEVKGNFFDSSLDYLGKEINGVGYEDEFFVTPQASSSTEDAINQLRSK
                     RPMSRTEVPSDIPSTDKQCNSEDEGATTGPTPSSSSSKMINFEFSNGHSYSSSADDNE
                     YVEYPLQHVEGFPCDVEEEERMLMEAVLLSLKDLEPKQPGHQQPSADDSKPSATDHCP
                     PIKTDQTGVSTESSSDSPSQFMSPCNSTSSAEQSSNITPSVDGSGSTSKRSASNSYLV
                     GSSDVDMVDRTKATVTVEKSASSNIMDGLLKRWDLNFFKNR"
     misc_feature    204..947
                     /gene="LOC139904012"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; Region:
                     FrsA; COG1073"
                     /db_xref="CDD:440691"
ORIGIN      
        1 tacatacaca catacagttt atatatatat atatatacat aacttggaga agaaaattag
       61 gatcttggaa acaaagcaag atctactgtt gttaaatctt gatggaacag cttatcaact
      121 tcattattcg cccacctaga gctgagtacg agccaaacaa tgacttacta gatcaagaat
      181 tcatgcttaa aggaaaatgg tttcaaagga aagatataga gattgtaaat agccgaggag
      241 atgttctgca gtgtagtcat tacttgccta ttgtgagtcc agaaggaaag cctttgccat
      301 gtgtaatata ctgccatgga aacagtgggt gccgagcaga tgctagtgaa gctgctataa
      361 tattactgcc gtcaaatatt acagtattta ccctcgattt ctctggttct ggactctctg
      421 gaggagaaca tgtcagttta gggtggtacg aaaagaacga tttgaaatcg gtggtagatt
      481 atttgcgggc tgatgaaaat gtttcattaa ttggcctttg gggccggtca atgggtgctg
      541 taacaagcct gatgtatgga gctgaggatc cttcaatagc aggaatggtt cttgacagcc
      601 ctttctccga tttggttgat ttaatgatgg aacttgttga tacctacaaa attcgtctgc
      661 caaagtttac tgttaagttt gctatccagt acatgcgaag agctattctt aaaaaggcaa
      721 aattcgatat tgtggagctc aataccataa aggttgcaaa gtcttctttt gttccagtac
      781 tatttggtca tgcatgcgat gatgatttta tacagccaca tcattctgat cgtatttatg
      841 aagcttacat gggggacaaa aatatcataa aatttgaagg tgaccataat tctccacgtc
      901 cccaattcta ttttgattct ataaacatct ttttccacaa cgtcttgcaa ccaccagaag
      961 atgaagttaa gggcaacttc tttgattcgt ctcttgatta cctcggcaag gaaatcaatg
     1021 gagttggata cgaagatgaa ttttttgtta cgcctcaagc atcaagtagc accgaggatg
     1081 caattaatca actccgttct aaaaggccaa tgagtaggac cgaggtccct tctgatatcc
     1141 cgtcaacaga taaacaatgc aactctgagg acgaaggagc tactaccggg cctactccat
     1201 catcatcatc ttcaaaaatg ataaattttg agttttctaa tggccattct tactcatcat
     1261 cagcagatga taatgagtat gttgagtacc cacttcaaca cgtggaaggt ttcccatgtg
     1321 atgtcgagga agaagaaagg atgctcatgg aagctgtact cctgtcgtta aaagatttag
     1381 aaccgaaaca accaggccat caacaaccat cagctgatga tagcaagcct tcagcgacag
     1441 atcactgtcc accaataaaa accgatcaaa caggggtttc aacagaaagc agcagcgatt
     1501 caccttcaca atttatgtcc ccatgtaata gcacatcgtc agctgaacag tcatcgaata
     1561 taactccatc tgtcgatggc tctggtagta caagtaagcg ttctgcttca aatagttact
     1621 tagttggttc atcagatgtt gacatggtag ataggactaa agctacagta acagttgaaa
     1681 aaagtgcatc gagtaacata atggatgggt tgttaaaacg ttgggatctt aacttcttta
     1741 agaacagatg acgatttcgg gttatagtag tatgtcttat atttttggtg attataatga
     1801 tttatttgtt tatttttatt ttattttgga ggtggtgtgg tgattcattg atttgatttt
     1861 atactgaaaa atggaattgg aaatgtgata gaaatttgat gggagattgg tgtagtttga
     1921 tgtataaagg gtttaatcta tgtttgtgat tctataattt atacaagtgt agaa
//
LOCUS       XR_011778628             894 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904013), ncRNA.
ACCESSION   XR_011778628
VERSION     XR_011778628.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..894
                     /gene="LOC139904013"
                     /note="uncharacterized LOC139904013; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904013"
     ncRNA           1..894
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904013"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904013"
ORIGIN      
        1 gatatcagct ggaaaaaaaa gaaaacaaaa tcaaacgact atctcctgtg cacccatacc
       61 gtctcccttg cattctctct taccttcttc ctctaatatc ttctttccct actttcttct
      121 ttttatttct cacatccaat ttcatcactg ctttgaagat agggttccat ttttctatct
      181 ctgaaggtag atttcgattc cattggttta gggtttatgc tggtgttttt aattgatatg
      241 catcgcatac gtcaagggtc taaagttgaa cagactaatt tcttgctctc ctggtgattt
      301 gctctcatgt actctcattc ttcatttcga cggtgactga tattaatcgc cgatcatcta
      361 tctatctatc tatttatcta tctatcttct ttctcttcat ctcaatgcta actgatattg
      421 tataagttga aattgatcgc tgatcatcac tcatcacgta tcatatatat tttgtaatta
      481 tagtttcaat atatacaggc atatctccat accttccttt gatcatagat tgtgacttca
      541 actatccttt gaatttcaca tattaattat atttagcatc attcagataa tagtgacacc
      601 ccgtttcttg cgttgactga aagtaaagaa atggtgcttt actgcatacg taatgatgta
      661 accccggtta ccgaaactcg aagtgcaaga aacaatattg atatacctgt aaataaatgg
      721 gttcacattg tttgtgaggt gataaggata aggaagccgt tcagtgatag attatatgag
      781 ctagttgctg gtattcagtg agtggctcta tctccggata gagtattaag tatctgacac
      841 gctacttgtt cagactcttt atgttatgtt tatgttcagt atgaatacca tgtg
//
LOCUS       XM_071885948            1242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ABCI12,
            chloroplastic-like (LOC139904014), mRNA.
ACCESSION   XM_071885948
VERSION     XM_071885948.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1242
                     /gene="LOC139904014"
                     /note="protein ABCI12, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139904014"
     CDS             79..1242
                     /gene="LOC139904014"
                     /codon_start=1
                     /product="protein ABCI12, chloroplastic-like"
                     /protein_id="XP_071742049.1"
                     /db_xref="GeneID:139904014"
                     /translation="MFTPLVQIHPISNFNPHYFSSHNPLIFFTYQLPQNPKTLNYTLS
                     SLNYKRKTPFQTLIKCSQNSDSNSPNWERLIPKDLISAEKILRSIAGATSSPICQFIS
                     SPTTFLHSVDSRIKLAWLLVLVMLPARSHIYMRFGLIGFLALLSVWIQPRQVWVDQLG
                     RVTLLSGILFLMLGLGADSAPMVVQSRTPPPSMMGLPSIPPSFDGYSYLLFKVGPLQL
                     TRKGLSVASTSACLTFTIFQSASLCLTTTTPEQLAFALQWFIKPLAYVGVPVAEVILT
                     LLLSLRFINLVFDEVRIVALGIVSRRINWQQLATMETVEVFFTYMRRIFKNIFNHAEQ
                     ITQAMTVRGFNGDSSSHNIYFSSASSAPMANIVSVMTLLGLIGAAALSEYVLV"
     misc_feature    391..1119
                     /gene="LOC139904014"
                     /note="ECF-type transporter transmembrane protein EcfT
                     [Coenzyme transport and metabolism]; Region: EcfT;
                     COG0619"
                     /db_xref="CDD:440384"
     misc_feature    order(436..441,445..450,457..462,571..573,583..588,
                     595..600,763..765,775..777,796..798,805..810,823..825,
                     892..894,904..909,913..921,925..930,937..942,949..954,
                     1027..1032,1036..1044,1048..1056,1060..1065,1069..1074,
                     1084..1086,1093..1098,1114..1116,1120..1122)
                     /gene="LOC139904014"
                     /note="S component interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:410987"
     misc_feature    order(901..903,913..915,922..927,931..936,1069..1071,
                     1078..1083,1087..1104,1111..1119,1129..1131,1135..1137)
                     /gene="LOC139904014"
                     /note="A' component interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:410987"
     misc_feature    order(964..987,1033..1035,1042..1047,1054..1056)
                     /gene="LOC139904014"
                     /note="A component interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:410987"
ORIGIN      
        1 acaagctctg tttctttgta taatcatcag actccattga agcaaaagca taagctttac
       61 ttgaaaagag tcaatcaaat gttcacccca ctggtccaaa tccacccaat ttccaatttc
      121 aatccacatt acttctcttc acacaacccc cttatcttct ttacttatca acttccccaa
      181 aacccaaaaa ccctaaatta tactctctct tccctaaatt acaagcgcaa aactccgttt
      241 caaaccctaa tcaaatgtag tcaaaacagt gattctaatt cgccaaactg ggaacgattg
      301 ataccgaaag atttaatttc agctgagaaa attctgaggt cgattgcagg ggcaacttct
      361 agtccaattt gtcagtttat atcttcaccc acaactttct tgcattccgt tgattccaga
      421 attaaattgg catggcttct tgttttagtc atgttaccag caaggtcaca tatatacatg
      481 cgttttggat taattgggtt tttagctttg ttatccgttt ggattcagcc aagacaagtt
      541 tgggtggatc aattaggaag agttacttta ctatctggga ttctgttctt gatgttgggg
      601 ctcggtgctg atagtgctcc catggttgtg cagtcgagaa caccaccacc ttcaatgatg
      661 ggtttgccca gtattccacc ttcttttgat ggttattcgt atctgttgtt taaagtagga
      721 ccgttgcagc tgacacgaaa aggattgtct gtagccagca catctgcttg cttaaccttt
      781 accatttttc aaagtgcaag tctttgtttg accactacca caccggaaca acttgctttc
      841 gctctacagt ggtttataaa gccattagca tatgttggtg ttcctgttgc cgaagttatt
      901 cttactcttc tactatcatt gagatttatt aacctagtct tcgatgaggt acgaattgtg
      961 gcgttgggga ttgtttctcg gagaataaat tggcaacagt tggctactat ggagacagtt
     1021 gaagttttct tcacgtacat gcgccggatc ttcaaaaata tatttaatca cgcagagcag
     1081 attacccagg cgatgactgt gagaggattt aatggtgaca gcagctcaca caatatttac
     1141 ttctcatcag cttcttctgc accaatggca aacattgttt ccgtaatgac gctacttgga
     1201 cttataggtg ctgctgcttt atccgagtat gtgcttgttt aa
//
LOCUS       XM_071885949            1813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904015), mRNA.
ACCESSION   XM_071885949
VERSION     XM_071885949.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1813
                     /gene="LOC139904015"
                     /note="uncharacterized LOC139904015; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904015"
     CDS             40..1659
                     /gene="LOC139904015"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742050.1"
                     /db_xref="GeneID:139904015"
                     /translation="MASDASNSIETKLKIQIYATPNNEVTPFWKAKYEKDAKKYWDVF
                     YKRHQDRFFKDRHYLDKEWGDYFSEGEEKVILEVGCGAGNTIFPLVATYPGIFIHACD
                     FSPRAVDLVKAHKDFEESKINAFACDLTSDELVNHVPPSSVDIVTMIFVLSAVSPEKM
                     PRVLQNIKKILKPNGYVLFRDYATGDLAQERLTCKDQKISENFFVRGDGTRAFYFSEE
                     FLKNLFQENGFITKECGVCCKQVENRSREIVMNRRWVQAVFQLDDDNVEMHKMSKEPE
                     NGFDVDISEGFAFEMFGISSPKDEITEFRLRDWNFKIKLLSKEFQHTCKSTGLMLWES
                     ARLMASVIASNQTIVSGKNVLELGSGCAGICSMIATKTAHLVVPTDGDEKALQLLNEN
                     VTSNLEESLRSKLHVKKLYWGNKEHIESVKKLSGNKGFDVIIGTDVTYVAEAIMPLFQ
                     TARELISVDEGDEQGSKPALILCHIFRRVDEASILSAASGFGFQLVDRWPNDTLTDSP
                     SRSIINDWFASRVKEDEYENAALNIMYFHTK"
     misc_feature    265..570
                     /gene="LOC139904015"
                     /note="Methyltransferase domain; Region: Methyltransf_12;
                     pfam08242"
                     /db_xref="CDD:400515"
     misc_feature    order(271..291,343..348,418..426,484..486)
                     /gene="LOC139904015"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     misc_feature    997..1512
                     /gene="LOC139904015"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 ccagattcta ctttgagcat cctaacaact actttgtgaa tggcttctga tgcctccaat
       61 agcattgaaa caaaactgaa gatacaaata tatgctacac caaataatga agtaacgcct
      121 ttctggaaag ctaaatatga aaaggatgct aagaaatatt gggatgtatt ttacaaacgt
      181 catcaagatc gcttcttcaa ggatcgacat tacttggata aagaatgggg cgactatttt
      241 tctgaaggag aagaaaaagt catactagag gttggatgtg gagcaggaaa caccatcttt
      301 cctttagttg ccacgtaccc tggtatattt atccatgcgt gcgacttctc gcctcgtgca
      361 gttgacttgg tcaaggcaca taaagacttt gaagaatcaa agataaatgc atttgcatgt
      421 gatttaacta gtgatgaact ggtcaaccat gtaccaccgt cttctgttga cattgtaacg
      481 atgatatttg tcttatctgc agtatcgcct gaaaaaatgc ctcgtgtact gcaaaacatc
      541 aaaaagattt tgaaaccaaa cggttatgtg ttattccgtg actatgctac gggagatctt
      601 gcgcaggaaa ggcttacgtg taaggatcaa aagatcagtg agaatttttt tgtcagaggt
      661 gacggaacac gtgcattcta tttctctgag gaattcttga aaaatttgtt tcaagaaaat
      721 gggttcataa ctaaagaatg cggcgtgtgt tgtaagcaag ttgaaaatcg ttcacgtgag
      781 atagtaatga atcggcgttg ggtccaagct gtctttcagt tagatgatga taatgttgag
      841 atgcataaaa tgtcgaagga gcctgaaaat ggatttgatg tagacatatc ggaaggattt
      901 gcatttgaaa tgtttggcat ttcttcacca aaggatgaga tcacggagtt caggttacga
      961 gactggaact tcaagatcaa attgctttcg aaagagtttc aacacacctg caaatcaaca
     1021 ggtttaatgc tatgggaatc agctcgactc atggcctctg ttattgcttc aaaccaaact
     1081 atcgtttcag gcaaaaacgt attagagtta ggatccggct gtgcaggaat ctgctcaatg
     1141 atcgccacca aaaccgccca cctcgtggtc cccacagacg gagacgaaaa agcattacaa
     1201 cttcttaacg aaaacgtaac ttcaaatctt gaagaatctt tacggtcaaa gttacatgtc
     1261 aagaaattat actggggtaa caaagaacat atagaatctg ttaaaaaact aagtggcaat
     1321 aagggttttg atgtcataat cgggacagat gtaacttatg ttgctgaagc aattatgccg
     1381 ttatttcaaa ctgcaagaga gttaatttca gtggacgaag gtgatgaaca gggatcgaaa
     1441 cctgcactta ttttatgcca tatttttcgt agagttgatg aggcgtctat actttcggct
     1501 gcatctggtt ttggttttca gttggttgat agatggccaa acgacacact aacagacagc
     1561 ccgtctcgta gtatcatcaa cgattggttt gcgagtagag ttaaagaaga tgaatatgaa
     1621 aatgctgcat taaacatcat gtactttcat acaaagtagt gatcttattt acttattgtt
     1681 gttgtagtct atatgtttcc cctataatat ttattttcct ctaaaaaagt ttgacagaga
     1741 tgatacagtt ttctgtttag atacatggaa attaagaagt gtgaactttt attcttttca
     1801 aaataggtgg ttt
//
LOCUS       XM_071885950            1975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides conserved oligomeric Golgi
            complex subunit 8-like (LOC139904016), mRNA.
ACCESSION   XM_071885950
VERSION     XM_071885950.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1975
                     /gene="LOC139904016"
                     /note="conserved oligomeric Golgi complex subunit 8-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139904016"
     CDS             38..1762
                     /gene="LOC139904016"
                     /codon_start=1
                     /product="conserved oligomeric Golgi complex subunit
                     8-like"
                     /protein_id="XP_071742051.1"
                     /db_xref="GeneID:139904016"
                     /translation="MDTGSPIADESSATMAELLPLASVSQQPYVSELLSFTLDRLHKE
                     PELLRVDAERIRRQMQEVAVNNYRAFISAADALVSIRHEVSSIDKHLESMIAEVPKLT
                     SGCAEFIDSAEKILEKQKMNQTLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAY
                     VSKLSTMHPRIPVIQALATEVRQTTQSLLLQLLQKLRTNIQLPECLRIIGYLRRIGVY
                     SEYEMRLQFLRCRESWLSGILDDLDQKNAYDYLKGTINCLRSHLFDVVNQYRAIFADD
                     TSGSEENYDGGLLFSWAMHQIASHLKTLKIMLPKITEGGSLSNILDQCMYCAMGLGWV
                     GLDFRGLLPPLFEEAVLNLFSKNMSTAVENFQLVLDSHRWVPLPAVGFSSNSYGEESQ
                     DDVTPPPNLMEHPPLAVFVNGVSAAMNELRPCAPISLKHILAQELVKGLRTVSDSLLR
                     YNTTRVLRENESVLFLSLCRSFIEVAYPHCATCFGRCYPGGSSLITDGNYLFEGLTRL
                     LATSSARQLPKRVQNTETKNATENGNTSTVENGSVTDVKETESSNAVEEDNLDNTNSA
                     THEKENEE"
     misc_feature    125..1054
                     /gene="LOC139904016"
                     /note="Dor1-like family; Region: Dor1; pfam04124"
                     /db_xref="CDD:427729"
ORIGIN      
        1 atcgtaaaac aagctaacag ggtccgattt aacaaaaatg gataccggaa gtccaatcgc
       61 cgacgaatca tcagcgacaa tggcggaact gttaccgtta gcttccgttt ctcaacaacc
      121 gtacgtatcc gaactacttt cattcactct cgatcgatta cacaaggaac cggagcttct
      181 acgggtcgat gccgaacgaa ttcggagaca gatgcaggaa gttgcggtta ataactaccg
      241 cgcgtttatt tctgcggccg atgctttggt ttcgattcgt catgaagtct cgtcaattga
      301 taaacacctc gaatctatga ttgcagaggt cccaaagcta acatcaggct gcgctgagtt
      361 cattgattct gcagaaaaga ttttggagaa gcaaaagatg aaccaaacat tgcttgcaaa
      421 tcatagtact ttgctggatt tacttgaaat tcctcagctt atggacacgt gtgtgaggaa
      481 tggaaattat gatgaagctc tagacttgga agcatatgtt agcaaactgt caaccatgca
      541 tccaagaata ccagtcattc aagcactagc tactgaagtt cggcagacaa cccagtcttt
      601 gcttttacag cttctccaaa agctaagaac aaatatccag ttaccagaat gtcttcgtat
      661 tatcggatat ctacgacgga taggagtata cagtgagtat gagatgcgct tacagttcct
      721 aaggtgcaga gagtcgtggt tatctgggat tcttgatgac ttagaccaga aaaatgctta
      781 tgactacctt aaagggacga taaactgtct taggtcgcat ctttttgatg ttgttaacca
      841 atatcgtgcc atattcgccg atgatacatc tggaagtgaa gagaattatg atggcggact
      901 tctcttcagc tgggccatgc atcagattgc ctctcacctt aaaactctca aaatcatgct
      961 cccaaagata actgaaggcg gttctttgtc caatatattg gaccagtgca tgtattgtgc
     1021 catggggctt ggctgggttg gattggattt tcggggcttg cttccacctc tatttgaaga
     1081 ggctgtctta aacttatttt caaaaaatat gagtacagcg gtggagaatt tccagttggt
     1141 tttggattct catcgatggg tcccattacc agcagtcggc ttctcatcca atagctatgg
     1201 tgaagaaagt caggacgatg tcactccacc tccaaattta atggagcatc cacctcttgc
     1261 tgtttttgtc aatggtgtgt ctgctgcaat gaacgagtta cgcccatgtg ctccaataag
     1321 tttgaaacat atccttgcgc aagaattagt gaaagggctt cgcacggttt ctgattcgct
     1381 actgaggtac aataccacca gggtgcttcg ggagaatgaa tccgtccttt tcctgtctct
     1441 gtgccgatca tttattgagg ttgcttatcc acattgtgct acatgctttg gacgttgtta
     1501 ccctggagga tcttccctaa tcacagatgg aaattacttg tttgaggggc tcactcgtct
     1561 tttggctaca tcttcagcta gacaattacc aaagagggtt caaaataccg agacaaagaa
     1621 tgcaacagag aatggtaata catccacagt tgaaaatggt tcagtgacgg atgtcaaaga
     1681 aacagaaagt agtaatgctg ttgaggaaga taacctggac aacacgaatt ctgcaaccca
     1741 tgaaaaagaa aacgaagaat aaatcctaga taccctttat attttatagt ttgtattata
     1801 aacaaaaatc gcagtcataa caaatgttac attattgttt ttcatggtta gtctctcttt
     1861 gtgttagtgt ttcgttctcg aaatcaaggt atttttttgg ttgaggggta atataatcta
     1921 atctatgata aaaacgtatt cggaactgga attgtctcat gttctgcatt ctagt
//
LOCUS       XM_071885951             640 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904018), mRNA.
ACCESSION   XM_071885951
VERSION     XM_071885951.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..640
                     /gene="LOC139904018"
                     /note="uncharacterized LOC139904018; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904018"
     CDS             51..467
                     /gene="LOC139904018"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742052.1"
                     /db_xref="GeneID:139904018"
                     /translation="MGKPRKELLASAPWRATGDDQRDKFKDAKLKVTAQPGTTPTMHV
                     PGNKNPKNLNLDEDDSLQIDPEFRYSFQRNFQFLQRVFSIDTIVKPLPYSMQYNVSRN
                     LSFFTRIFTQFYDPQGIANAQKALGLGQEDKVRNVR"
     polyA_site      640
                     /gene="LOC139904018"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttatctatct atccaacctc acgcacactg ggcgactgat tggataaaaa atggggaaac
       61 cgagaaaaga attgttagca tcggcgccat ggcgagccac cggcgacgat caacgagaca
      121 agttcaaaga cgcaaagctt aaagtcactg cacagccagg cactacacct actatgcacg
      181 ttcccggtaa caaaaacccc aaaaacctaa accttgatga agacgattca ctccaaattg
      241 atcctgaatt tcgttacagc ttccaacgca attttcagtt cctgcagcgg gttttcagca
      301 ttgatactat tgtgaaaccc cttccttatt caatgcaata caatgtttct cgcaacctaa
      361 gtttttttac tcgtatcttc acgcagttct acgatcctca aggtattgca aatgctcaaa
      421 aggctctcgg attaggacaa gaagacaaag tccgtaatgt ccgttgatcc aggcgagaga
      481 ttcttttagc tgtatttgta atgaaatgat gtattatcat gttacaatat cacatcttat
      541 taaagcaaat gacaagttcg ttatttttga tcatttcaca tctttattta tatgctctaa
      601 agcttaattt tgaactttaa ttttttagct ttcaagtgta
//
LOCUS       XM_071885952            1573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139904019), mRNA.
ACCESSION   XM_071885952
VERSION     XM_071885952.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1573
                     /gene="LOC139904019"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904019"
     CDS             39..1340
                     /gene="LOC139904019"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071742053.1"
                     /db_xref="GeneID:139904019"
                     /translation="MQQTSQKLAKTEAANGLDLQRFLNQQDKPDQQDETEKHDTRKRK
                     TRAPKVSTVSVDLGYDLNLGTSSNDPSTTEKVSDGPQRRLWVKNRSADWWDKYNSADV
                     TEDEFKKAFQMGKDTFEIICNELTASVAKENTMLRDAVPVRQRVAVCIWRLATGESLR
                     LVSKRFGLGISTCHKIVLDVCLAIKDVLMPKYLQWPNNETMRVISNEFESIGNIPNVV
                     GSMYTTHIPIIAPKVNVAAYFNKRHTDRKQKTCYSVTVQGVVDPNGVFTDVCIGWPGS
                     MPDDQVLEKSALYQRANGGLLKNVWIVGGPGYPLMDWVLVPYTQPHLTWTQHAFNEKI
                     SEVQKVSKDAFARLKGRWSCLQKRTEMKLQDLPVVLGACCVLHNICEIRNEEIEPSLL
                     IEVVDDEMVPELALRSAFANSARDSMAHNLLHHNHAGTSFL"
     misc_feature    699..1172
                     /gene="LOC139904019"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 aatctagatt gtttcagaaa caacaatcca gttataatat gcaacagaca agtcaaaagc
       61 ttgccaaaac tgaggccgca aatggactcg atttacaacg ttttctcaat caacaagaca
      121 agcctgatca acaagacgaa acagaaaaac acgatactag aaagcgaaaa acacgggcac
      181 ctaaagtttc aacggtgtcc gttgacttag gatacgattt gaatctagga acgagtagta
      241 acgatccatc gacgaccgaa aaagttagcg atgggccgca gcggcggcta tgggttaaga
      301 acaggtcagc agactggtgg gataaatata atagtgctga cgtcacagag gatgagttta
      361 aaaaagcttt ccaaatgggg aaagatactt ttgagattat ttgtaacgaa ttaactgctt
      421 ctgttgctaa agagaatact atgttaagag atgcagtccc tgtaagacaa agggttgcag
      481 tttgtatatg gcgattagcg acaggcgaat cgttaagact tgtatcgaaa agattcggat
      541 tagggatttc gacgtgtcat aagattgttc ttgatgtatg tttagctata aaagatgttt
      601 tgatgcctaa gtatttacaa tggccgaata atgagacgat gagagtaatt agtaacgaat
      661 ttgaatcgat tggtaacata ccgaatgtgg ttggatcaat gtatacaact catataccta
      721 taatcgctcc gaaagttaat gtggctgcgt attttaacaa gcgacatacg gataggaaac
      781 aaaagacttg ttattcggtt acggttcaag gtgttgttga cccgaatggt gtgtttactg
      841 atgtgtgtat agggtggccc ggttcgatgc ccgatgatca agttttggaa aaatcggcgc
      901 tttatcaacg ggcgaatggt gggttgttga aaaatgtttg gatagttggt gggccagggt
      961 accctttaat ggattgggtg ttagtacctt atacacaacc acatttaaca tggactcaac
     1021 atgcttttaa tgagaagatt tcggaggttc aaaaagtgtc gaaagatgcg tttgcgagat
     1081 tgaaagggcg atggtcgtgt ttacaaaaga gaaccgaaat gaagcttcaa gatttgccgg
     1141 ttgttcttgg tgcgtgttgt gttttgcata atatatgtga aattaggaac gaagaaattg
     1201 aaccgagttt gttgattgaa gttgtggatg atgaaatggt tcctgaactt gcgttgaggt
     1261 ctgcgtttgc taattcggct agagactcga tggctcataa tcttttgcac cataatcatg
     1321 ccggaacttc attcttgtga gttttttata attatatatg tataatgtat atgtatatgt
     1381 atacattggg agtacacgta gaatcgccat tttgttaaaa ttcttgtaat ggggtttaat
     1441 cgatatgtat tgtattcccc ttactgcaaa tgtatggatg aatatttgac atttatttag
     1501 cttggatcag ctgatagaac atgaccattt tgtaattgtt acaatcattc gatgagccgg
     1561 aattcatttt ttt
//
LOCUS       XM_071885953             524 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At4g33100 (LOC139904020), transcript variant X1, mRNA.
ACCESSION   XM_071885953
VERSION     XM_071885953.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..524
                     /gene="LOC139904020"
                     /note="uncharacterized protein At4g33100; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904020"
     CDS             158..412
                     /gene="LOC139904020"
                     /codon_start=1
                     /product="uncharacterized protein At4g33100"
                     /protein_id="XP_071742054.1"
                     /db_xref="GeneID:139904020"
                     /translation="MGFIRDKRNSSKSTSPCADLRVAYHNCFNRWYSEKFLKGHWDKE
                     ECVSEWEKYKDCLSKHLEDKNLSRILEAEGMNRIPASVSK"
     misc_feature    158..379
                     /gene="LOC139904020"
                     /note="Uncharacterized protein At4g33100; Provisional;
                     Region: PLN03079"
                     /db_xref="CDD:178628"
ORIGIN      
        1 aatcttgtat tcttgtgtga caagaaaatt aaaatcttga tattaatctt ttcccccacg
       61 ccggatcttg tccgtatcag ttaaacccta aaactccgtt gttgttcagt tctcatcgat
      121 ttaatcgtat aaaccctaaa ttgaaaaggg gctttacatg ggattcatca gagacaagcg
      181 taattcatca aaaagtacat ctccttgtgc tgatctcaga gttgcctatc ataattgctt
      241 caacaggtgg tattcagaga agtttttgaa aggacattgg gataaagaag aatgtgtttc
      301 tgagtgggaa aagtataaag attgtttatc taaacatcta gaagacaaga atttgagccg
      361 cattttggaa gcagaaggaa tgaatagaat acctgcttct gtatctaaat gagtagtact
      421 tgctttacat taatcggtaa ggagttataa cttggaagtg tgtattatgc atcttttatg
      481 gtgtatcttg tgccaaacag tttttgttct atagaaaatt attg
//
LOCUS       XM_071885954             787 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At4g33100 (LOC139904020), transcript variant X2, mRNA.
ACCESSION   XM_071885954
VERSION     XM_071885954.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..787
                     /gene="LOC139904020"
                     /note="uncharacterized protein At4g33100; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904020"
     CDS             158..412
                     /gene="LOC139904020"
                     /codon_start=1
                     /product="uncharacterized protein At4g33100"
                     /protein_id="XP_071742055.1"
                     /db_xref="GeneID:139904020"
                     /translation="MGFIRDKRNSSKSTSPCADLRVAYHNCFNRWYSEKFLKGHWDKE
                     ECVSEWEKYKDCLSKHLEDKNLSRILEAEGMNRIPASVSK"
     misc_feature    158..379
                     /gene="LOC139904020"
                     /note="Uncharacterized protein At4g33100; Provisional;
                     Region: PLN03079"
                     /db_xref="CDD:178628"
ORIGIN      
        1 aatcttgtat tcttgtgtga caagaaaatt aaaatcttga tattaatctt ttcccccacg
       61 ccggatcttg tccgtatcag ttaaacccta aaactccgtt gttgttcagt tctcatcgat
      121 ttaatcgtat aaaccctaaa ttgaaaaggg gctttacatg ggattcatca gagacaagcg
      181 taattcatca aaaagtacat ctccttgtgc tgatctcaga gttgcctatc ataattgctt
      241 caacaggtgg tattcagaga agtttttgaa aggacattgg gataaagaag aatgtgtttc
      301 tgagtgggaa aagtataaag attgtttatc taaacatcta gaagacaaga atttgagccg
      361 cattttggaa gcagaaggaa tgaatagaat acctgcttct gtatctaaat gagtagtact
      421 tgctttacat taatcggcat ccaatacgca tagtttatca gttgaaatta tcttctgtcc
      481 agaatctgat catgttctta cctatatcgt tgcttatgtt ccttgcaatg cttggctcgg
      541 gcacaccttg ggcaaccttt tggaggcaga acattaccaa aaataaatta gctgttaatg
      601 tactggattt tagttgtgac caccgagtta aattagtgat attaacgtag taaataactc
      661 ctcaatagtc aatagtaatg gcattctcgt tttaggtcat ataggagcgg attttctttt
      721 ttctttttgt gatcatcaat taatcattat atactaccaa ctctaaggaa ctgttgtgaa
      781 attggtt
//
LOCUS       XM_071885955            2097 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 25S rRNA
            (cytosine-C(5))-methyltransferase NSUN5-like (LOC139904021),
            transcript variant X1, mRNA.
ACCESSION   XM_071885955
VERSION     XM_071885955.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2097
                     /gene="LOC139904021"
                     /note="25S rRNA (cytosine-C(5))-methyltransferase
                     NSUN5-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139904021"
     CDS             46..1542
                     /gene="LOC139904021"
                     /codon_start=1
                     /product="25S rRNA (cytosine-C(5))-methyltransferase
                     NSUN5-like isoform X1"
                     /protein_id="XP_071742056.1"
                     /db_xref="GeneID:139904021"
                     /translation="MVNKKKKPVQPTKAQATEPKNRRLTNAERSSYFARREAAKVLKT
                     VLQGDVKRKAVGSIKTLVYSPSIRNKKATFALVCQTLKYLPIIKDVMETANILNSKWK
                     RQQELMYIITYDILFGQVETLTGDAEKYLILRKGPLQSVLAKILVKKGAKRIEDLMAQ
                     YQIYDVKKPRYVRVNTLKMDVETAVFELGKENVVQKDDLIPELLVLPPGTDLHNHSLV
                     TNGSVFMQGKASSMVAAALGPKPGWEVIDACAAPGNKTIHLAALMKGKGKIVACELNK
                     DRVKRLEYTTKLAGADNVEVLHGNFLNLNPDDQLYSQVRAILLDPSCSGSGTVADRLD
                     YLLPSHTSGEGDSGDVGRLTKLAAFQEKALIHALSFPSVERVVYSTCSIHQIENEDVI
                     KSVLPVAASYGFQLATPFPQWPRRGLPVVEGSHHLLRTDPVEDKEGFFIALFTRNAST
                     FTEVPHETETDNSSDYMQPGAFKRHRYRKMFVRSFPFTKLSKLYLHRR"
     misc_feature    <493..1389
                     /gene="LOC139904021"
                     /note="16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF
                     family [Translation, ribosomal structure and biogenesis];
                     Region: RsmB; COG0144"
                     /db_xref="CDD:439914"
ORIGIN      
        1 tcacaacgcc gctcccgagt ccgctatcag gtagaagatc aaaccatggt gaataaaaag
       61 aagaaaccgg ttcagcctac taaagcacag gcgactgagc caaagaaccg gcggctaact
      121 aacgctgagc ggtcttcata cttcgctcgc cgagaagcag ctaaagtatt aaaaaccgta
      181 ttgcaaggag acgttaaacg caaagctgtt ggttcaatta aaaccctagt ttatagtcca
      241 tcaatcagaa ataagaaagc tacatttgct ttagtctgtc aaaccctaaa atatcttcca
      301 ataatcaagg atgtaatgga gactgctaat atattaaata gtaaatggaa gaggcaacag
      361 gagttgatgt acattattac gtatgacatt cttttcggac aggtagaaac gttaacagga
      421 gatgcagaaa agtatctcat tctccggaaa ggtccgctac agtcagttct tgcaaagatt
      481 ttagtgaaaa agggagcaaa acgtatagaa gatctgatgg ctcaatatca gatttatgat
      541 gttaagaaac ctcgctatgt ccgtgttaat actctgaaaa tggatgttga aactgctgtg
      601 tttgaactag gcaaagagaa tgtggttcag aaggatgact tgattcctga attattggtt
      661 ctcccacccg ggactgattt acacaatcat tctttggtta ccaatgggag tgtatttatg
      721 caaggtaagg caagctccat ggtagcggct gcccttgggc ctaaaccagg atgggaggtt
      781 attgatgcat gtgctgcccc tggaaacaaa acaatacacc tggccgctct tatgaaaggg
      841 aagggaaaaa ttgttgcttg tgaacttaat aaagatagag ttaagcgctt ggaatacact
      901 acaaagctgg ccggtgctga taatgttgaa gttttgcacg ggaatttctt gaacttgaat
      961 cctgacgatc aattatactc tcaggttcgt gctatattgt tggacccatc atgttcagga
     1021 tctgggacag ttgctgatag attggattat ttgcttccat cacatacctc aggtgaaggt
     1081 gatagtggtg acgtaggacg gctcaccaaa cttgctgctt tccaggagaa ggcgttgatt
     1141 catgcattgt cgtttccatc ggtggagaga gtagtgtaca gcacatgttc aattcaccaa
     1201 attgagaatg aagatgtgat caaatcggtc ttacctgttg ctgcgtccta tgggtttcaa
     1261 ctcgcaactc cttttccgca atggccccgt cgtggtctcc ctgttgttga aggatcacat
     1321 catctactca gaacggaccc tgtggaggat aaagagggct tctttattgc actttttaca
     1381 agaaacgcct caacttttac tgaggttcca cacgaaacag agacagacaa ttcttcagac
     1441 tatatgcaac ccggagcttt taagagacat cgttaccgta aaatgtttgt aagatctttc
     1501 ccatttacca aattatctaa attgtatcta cacagaaggt aattctcagt gttgttagaa
     1561 cacaattttg gctgatgttt tttttctctc cccaaaatgg ttgggaacgt gtatcatgtt
     1621 tcagagcatc attcattgtt gactacattt tatgacttat aacataaagc taatatcttt
     1681 tttaagataa gggccccctt aatagtatta atgtaagtca cagactatgt tggagtcccg
     1741 tggtggacta tttgtaattg ggtgtgtgtt tgccattaaa ataagtgacc gagtaatctt
     1801 aattgtgatt atataaaggg accagacttt gctacagaac tctataattt catttcgagt
     1861 tagttagtgc ttattattaa ccaaatttgt ggtcatgcac actgtaatag actaattgca
     1921 tatccatact ttacaaaact aggttccaca agaaagaaca gaattgaatt caaaacaagc
     1981 ctatggaaaa ccaggttcca catacaaaaa gaaaacataa ttcttgttat aaaattaatt
     2041 aacaatgctt atgaactttc tatgtactcc gaatttatct gtggaaaaat gcgactc
//
LOCUS       XM_071885956            2180 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 25S rRNA
            (cytosine-C(5))-methyltransferase NSUN5-like (LOC139904021),
            transcript variant X2, mRNA.
ACCESSION   XM_071885956
VERSION     XM_071885956.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2180
                     /gene="LOC139904021"
                     /note="25S rRNA (cytosine-C(5))-methyltransferase
                     NSUN5-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139904021"
     CDS             46..1515
                     /gene="LOC139904021"
                     /codon_start=1
                     /product="25S rRNA (cytosine-C(5))-methyltransferase
                     NSUN5-like isoform X2"
                     /protein_id="XP_071742057.1"
                     /db_xref="GeneID:139904021"
                     /translation="MVNKKKKPVQPTKAQATEPKNRRLTNAERSSYFARREAAKVLKT
                     VLQGDVKRKAVGSIKTLVYSPSIRNKKATFALVCQTLKYLPIIKDVMETANILNSKWK
                     RQQELMYIITYDILFGQVETLTGDAEKYLILRKGPLQSVLAKILVKKGAKRIEDLMAQ
                     YQIYDVKKPRYVRVNTLKMDVETAVFELGKENVVQKDDLIPELLVLPPGTDLHNHSLV
                     TNGSVFMQGKASSMVAAALGPKPGWEVIDACAAPGNKTIHLAALMKGKGKIVACELNK
                     DRVKRLEYTTKLAGADNVEVLHGNFLNLNPDDQLYSQVRAILLDPSCSGSGTVADRLD
                     YLLPSHTSGEGDSGDVGRLTKLAAFQEKALIHALSFPSVERVVYSTCSIHQIENEDVI
                     KSVLPVAASYGFQLATPFPQWPRRGLPVVEGSHHLLRTDPVEDKEGFFIALFTRNAST
                     FTEVPHETETDNSSDYMQPGAFKRHRYRKMFVECLHVVV"
     misc_feature    <493..1389
                     /gene="LOC139904021"
                     /note="16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF
                     family [Translation, ribosomal structure and biogenesis];
                     Region: RsmB; COG0144"
                     /db_xref="CDD:439914"
ORIGIN      
        1 tcacaacgcc gctcccgagt ccgctatcag gtagaagatc aaaccatggt gaataaaaag
       61 aagaaaccgg ttcagcctac taaagcacag gcgactgagc caaagaaccg gcggctaact
      121 aacgctgagc ggtcttcata cttcgctcgc cgagaagcag ctaaagtatt aaaaaccgta
      181 ttgcaaggag acgttaaacg caaagctgtt ggttcaatta aaaccctagt ttatagtcca
      241 tcaatcagaa ataagaaagc tacatttgct ttagtctgtc aaaccctaaa atatcttcca
      301 ataatcaagg atgtaatgga gactgctaat atattaaata gtaaatggaa gaggcaacag
      361 gagttgatgt acattattac gtatgacatt cttttcggac aggtagaaac gttaacagga
      421 gatgcagaaa agtatctcat tctccggaaa ggtccgctac agtcagttct tgcaaagatt
      481 ttagtgaaaa agggagcaaa acgtatagaa gatctgatgg ctcaatatca gatttatgat
      541 gttaagaaac ctcgctatgt ccgtgttaat actctgaaaa tggatgttga aactgctgtg
      601 tttgaactag gcaaagagaa tgtggttcag aaggatgact tgattcctga attattggtt
      661 ctcccacccg ggactgattt acacaatcat tctttggtta ccaatgggag tgtatttatg
      721 caaggtaagg caagctccat ggtagcggct gcccttgggc ctaaaccagg atgggaggtt
      781 attgatgcat gtgctgcccc tggaaacaaa acaatacacc tggccgctct tatgaaaggg
      841 aagggaaaaa ttgttgcttg tgaacttaat aaagatagag ttaagcgctt ggaatacact
      901 acaaagctgg ccggtgctga taatgttgaa gttttgcacg ggaatttctt gaacttgaat
      961 cctgacgatc aattatactc tcaggttcgt gctatattgt tggacccatc atgttcagga
     1021 tctgggacag ttgctgatag attggattat ttgcttccat cacatacctc aggtgaaggt
     1081 gatagtggtg acgtaggacg gctcaccaaa cttgctgctt tccaggagaa ggcgttgatt
     1141 catgcattgt cgtttccatc ggtggagaga gtagtgtaca gcacatgttc aattcaccaa
     1201 attgagaatg aagatgtgat caaatcggtc ttacctgttg ctgcgtccta tgggtttcaa
     1261 ctcgcaactc cttttccgca atggccccgt cgtggtctcc ctgttgttga aggatcacat
     1321 catctactca gaacggaccc tgtggaggat aaagagggct tctttattgc actttttaca
     1381 agaaacgcct caacttttac tgaggttcca cacgaaacag agacagacaa ttcttcagac
     1441 tatatgcaac ccggagcttt taagagacat cgttaccgta aaatgtttgt tgaatgtttg
     1501 catgtggtgg tatgacctgc tctcttcctt aggggtttga ctcccaatca ctgcaaagtt
     1561 ttccttgtta ttacctgctc attccttaag gctcggaggt tgcgcgacgt cttcaattcg
     1621 gacctcaccc gtggggttgt accacatgcg atgcccatat agattcgtcg tgggtattcc
     1681 tcctaagtgg aggtaatgta atagttcaat caaggaaatg atcgggtgag tgggtctcga
     1741 catcgcgttt gagcccacgt cagtgaatcc taacaatcgt taaaaaaaat gagtgcaaat
     1801 tttttttaat aaatatgtat ttaagtaata aaataataaa aaatgattaa gtttaactcg
     1861 gggcccaccg gaagtggagc cactcatcca atcatattcg tgccacatgt tgggaggaaa
     1921 ccacgggact cacacccata aggtaatgta gccaattggg gaaacacccg atgagattcg
     1981 aacgcaagac gttacgcaac ctcaaagcac cagtgaacaa ggcacacaag tggttaattt
     2041 tttctccacg acgggactcg agctcataac ctcaaagtta acgagagatg agattccatt
     2101 tgataccgct ttgcagatac cctttggtac tttgtgacgt attcatttaa tagtctttgt
     2161 gacgtactca tttaaaagat
//
LOCUS       XM_071885957            1625 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904023), mRNA.
ACCESSION   XM_071885957
VERSION     XM_071885957.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1625
                     /gene="LOC139904023"
                     /note="uncharacterized LOC139904023; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904023"
     CDS             113..1447
                     /gene="LOC139904023"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742058.1"
                     /db_xref="GeneID:139904023"
                     /translation="MERIAKLLYDASLEGNVTTLKMLIQEDPLILDKITLNHYDDMPL
                     HIASLLGHLDFVKEVLIRKPELSMEYDSQKRLALHIAAAKGHVEIVRALVSAKPMTCS
                     SLDRDGRNAIHLAAIRGRYEVVKELMQVHPHAARAMVQQDTILHLCVKYNQLEVLKLL
                     IDTIGDHEFVNSKDIDGNTILHLAVADKQTETVDFLVLNTKIDVNAVNKKGETCIEML
                     SQGPNGMKDHQIVRSLMHVGALDKNKNKEGFTGHPKTKIWFDDMDKKQNIKQKPKKKD
                     KYLENKRNTLMLIATFLATMAFQVGVNPPSGVWQDTKDGHTAGKSVMVKNHESLYHTF
                     LISNTLGFVSTLSIVLLLISGLPVLKRSTVLLRIMMGIMWVATISMLVTYTVSMWAVS
                     PETSSKVLKRIVLSIVAACAGLMTFIFIGLSDRIEEILESVPVVKKQAEIEI"
     misc_feature    122..964
                     /gene="LOC139904023"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    239..325
                     /gene="LOC139904023"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    order(347..352,359..367,371..376,386..388,395..397,
                     425..427,431..433,437..439,449..454,461..469,473..478,
                     488..490,497..499,524..526,530..532,536..538,548..553,
                     560..568,572..577,587..589,596..598)
                     /gene="LOC139904023"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    431..526
                     /gene="LOC139904023"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    638..736
                     /gene="LOC139904023"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    944..1285
                     /gene="LOC139904023"
                     /note="Domain of unknown function; Region: PGG; pfam13962"
                     /db_xref="CDD:433609"
ORIGIN      
        1 acaagaaact cccctatcat gtaaatatat ctataaaata atcataaatc tagtctaaac
       61 ttccatcaag attcaataac tactttgagt taactacttc aagttttgag aaatggagag
      121 aattgcaaaa cttctttatg atgcatcact agaaggaaac gtaacaacat taaaaatgtt
      181 gattcaagaa gatccactca ttcttgataa aattacacta aaccattacg acgacatgcc
      241 acttcacatt gcatcgttac ttggccatct tgattttgtc aaggaggttc taatccgaaa
      301 gcccgagctt tcaatggagt acgattcaca aaaacgcttg gctcttcata tagcagctgc
      361 aaaagggcat gtggaaatag ttagagctct tgtatcagct aaacctatga cgtgtagttc
      421 gcttgatcgt gatgggagaa acgctattca tctagcagcg attagaggac gatacgaagt
      481 tgtgaaagag ctcatgcaag ttcaccctca tgcagctaga gccatggtgc aacaagacac
      541 catcttgcac ttgtgtgtca agtataacca acttgaggtt ttgaagttgt taatagacac
      601 tataggtgat catgagtttg ttaacagtaa agatattgat ggcaatacta tactgcacct
      661 agctgtggct gacaaacaaa ccgagactgt agacttcttg gtactcaata caaaaataga
      721 tgtgaatgct gtaaacaaga agggggaaac atgtatcgaa atgctatctc aaggtccaaa
      781 tggtatgaaa gatcatcaaa tcgtacgatc actaatgcat gtgggagctc tcgataagaa
      841 caagaataaa gaaggcttta ctggacaccc caaaaccaaa atttggtttg atgatatgga
      901 caagaaacag aacataaaac aaaagccgaa gaagaaggat aaatatttgg agaataagcg
      961 aaatacttta atgttgatcg caacattttt agcaacaatg gcttttcaag taggagttaa
     1021 tccgccaagt ggcgtttggc aagacacaaa agacggtcat acggctggaa agtctgtcat
     1081 ggttaaaaat cacgaatctt tataccatac ttttttgatt tcgaacactc tgggatttgt
     1141 ttcgactctt agcatagttt tgttgcttat tagcggactg cctgtattga agcgtagtac
     1201 tgtactattg cggattatga tgggcataat gtgggtggct acgatttcta tgttggtcac
     1261 gtatacggtg tccatgtggg ctgtgagtcc agaaaccagc tcgaaagttc tcaagcgaat
     1321 cgtgttaagt attgttgcgg catgtgcagg gttgatgact ttcatattta tcggactgtc
     1381 ggatcggata gaggaaattc tcgaatcagt accagttgtt aaaaaacaag ctgaaattga
     1441 aatttaggtt atttgtgttt gtaagtggtg tgacatctta tgtaactgtg actttgtaat
     1501 gtggttacaa tgtactcggt actcggtagt agttttactc gagtgtattt aagtattgcg
     1561 tgcacttgta acaaattata ttttcaatga aaaagcctat ttctttgtct tcttgtgaag
     1621 aaaaa
//
LOCUS       XR_011778629            1245 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904024), transcript variant X1, misc_RNA.
ACCESSION   XR_011778629
VERSION     XR_011778629.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1245
                     /gene="LOC139904024"
                     /note="uncharacterized LOC139904024; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904024"
     misc_RNA        1..1245
                     /gene="LOC139904024"
                     /product="uncharacterized protein, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904024"
ORIGIN      
        1 atttattatt acttgacggg actagcacat ccgtttgacg ttgttcgaag tgtagtgtgg
       61 actaccctag cggcaatcat acttttggtt gttggtttct catccttcaa tccggttctt
      121 caagaagatg acatcaaacg caattcaatc cgtaaacaac atgaccataa ggtcaatcct
      181 tgagaaggaa aaattgaatg gtaacaactt cattgactgg tatcgaaacc ttcagattgt
      241 cttaaagtct gaaaggaagt tgcaccatct ggaaaatcct ttacctgaag ccccacctga
      301 aactgctaat gctactgttc gtaatgctta tactaagcag tataacgaac aacttgaagt
      361 ggcatgtctt atgcttgcta gcatgacctc tgagctccaa aggaacttaa tggactacaa
      421 tgcatatgac atgatcgagg aactcaagac gatgttccaa caacaggaag aacatgaatt
      481 gtttgaaact gtgaaagcgt ttcacgcttg caaacatgag ttggggcagc cagttagcca
      541 atatgtcttg aagatgaaag gctatctgga tcaattggag cgcctaggtt atgctatgcc
      601 accagttctt ggagtgcact tgatacttac ttcactatcc aaggactatg atggatttgt
      661 aatgaattac aatatgcata ccatgggaaa aacatccccg aactacatgc aatgcttaag
      721 caagctgaaa aggggctacc aaagaagact cctgcaatct taaccataaa ggaaggtaaa
      781 atccagaaaa gaaagccgca agctgctagt ggaaagggaa aaggaaagag taagcaagct
      841 tacacaccta agaagaaaat tccaccacca gcaaagaaag cgcatcccgc aaagaacatg
      901 gcttgtcacc attgtggcca gattggtcat tggagacgaa actgtgtgct ttacttggag
      961 gagttgaaga agggaaaggc tggttcgacc agcacttcag ggacttagga aaattcagaa
     1021 gctgaataag ggggctttgg atctgtacgt tggcaatggc gatcgtgcag ctgtcgaagc
     1081 tataggaagc tatgagctca tcctcccaag tggacttatt cttattttag ataattgtca
     1141 ttatgcacct tctattacta gaggtgttat ttcagtttct cgtttgaaag ataatggttt
     1201 taatcatgta ttcacagatt atggtatttc ggtttctaag gataa
//
LOCUS       XM_071885958            1226 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904024), transcript variant X2, mRNA.
ACCESSION   XM_071885958
VERSION     XM_071885958.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1226
                     /gene="LOC139904024"
                     /note="uncharacterized LOC139904024; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904024"
     CDS             693..989
                     /gene="LOC139904024"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742059.1"
                     /db_xref="GeneID:139904024"
                     /translation="MLKQAEKGLPKKTPAILTIKEGKIQKRKPQAASGKGKGKSKQAY
                     TPKKKIPPPAKKAHPAKNMACHHCGQIGHWRRNCVLYLEELKKGKAGSTSTSGT"
     misc_feature    879..926
                     /gene="LOC139904024"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
     polyA_site      1226
                     /gene="LOC139904024"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttacgtaaat taaaagtttt ataagttttt tttaaaaaaa aacatgggta gttaatttat
       61 aaaaggataa ttattaaaga tactaaaaga accttgttta ttttgtagat gacatcaaac
      121 gcaattcaat ccgtaaacaa catgaccata aggtcaatcc ttgagaagga aaaattgaat
      181 ggtaacaact tcattgactg gtatcgaaac cttcagattg tcttaaagtc tgaaaggaag
      241 ttgcaccatc tggaaaatcc tttacctgaa gccccacctg aaactgctaa tgctactgtt
      301 cgtaatgctt atactaagca gtataacgaa caacttgaag tggcatgtct tatgcttgct
      361 agcatgacct ctgagctcca aaggaactta atggactaca atgcatatga catgatcgag
      421 gaactcaaga cgatgttcca acaacaggaa gaacatgaat tgtttgaaac tgtgaaagcg
      481 tttcacgctt gcaaacatga gttggggcag ccagttagcc aatatgtctt gaagatgaaa
      541 ggctatctgg atcaattgga gcgcctaggt tatgctatgc caccagttct tggagtgcac
      601 ttgatactta cttcactatc caaggactat gatggatttg taatgaatta caatatgcat
      661 accatgggaa aaacatcccc gaactacatg caatgcttaa gcaagctgaa aaggggctac
      721 caaagaagac tcctgcaatc ttaaccataa aggaaggtaa aatccagaaa agaaagccgc
      781 aagctgctag tggaaaggga aaaggaaaga gtaagcaagc ttacacacct aagaagaaaa
      841 ttccaccacc agcaaagaaa gcgcatcccg caaagaacat ggcttgtcac cattgtggcc
      901 agattggtca ttggagacga aactgtgtgc tttacttgga ggagttgaag aagggaaagg
      961 ctggttcgac cagcacttca gggacttagg aaaattcaga agctgaataa gggggctttg
     1021 gatctgtacg ttggcaatgg cgatcgtgca gctgtcgaag ctataggaag ctatgagctc
     1081 atcctcccaa gtggacttat tcttatttta gataattgtc attatgcacc ttctattact
     1141 agaggtgtta tttcagtttc tcgtttgaaa gataatggtt ttaatcatgt attcacagat
     1201 tatggtattt cggtttctaa ggataa
//
LOCUS       XM_071885959            2237 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904025), mRNA.
ACCESSION   XM_071885959
VERSION     XM_071885959.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2237
                     /gene="LOC139904025"
                     /note="uncharacterized LOC139904025; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139904025"
     CDS             466..1503
                     /gene="LOC139904025"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742060.1"
                     /db_xref="GeneID:139904025"
                     /translation="MSLGAAEDDSGTEIHLPADIDWEMLDKSKFFFLGAALFSGVSGM
                     LYPIVVLKTRKQVLLKDMPCLKLGVSIMKHEGCRGFYRGFGTSLMGTIPARALYMGAL
                     EMTKSNVGCVTVKMGFSEAKAAAIANAAAGLSAAMAAQLVWTPIDVVSQRLMVQGGNG
                     AHPSALSAVRYNGGIDAFRKIVQTDGVRGLYRGFGISILTYAPSNAVWWAAYSMAHRA
                     VWGGVGCYYIKKEGNGGGGVGFTPDSKAVVAVQGVSAAMASGFSAVVTMPLDTIKTRL
                     QVLDGEGSNGKPSIGQTVRNMVKEGGLSACYRGLGPRWASMSMSATTMITTYEFLKRL
                     STKNQDCHTIG"
     misc_feature    547..783
                     /gene="LOC139904025"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    883..1116
                     /gene="LOC139904025"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    1222..1467
                     /gene="LOC139904025"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
ORIGIN      
        1 gccgcctctc taccttaaac aatacacaca cacacacaca cacacacaca cacacacaca
       61 tgatcggatc ttaactctcc tgctaatcga acgatgctct ctgtcaactc tccggtgagc
      121 ttattactag ccgccgttaa aaccttcata tatgtttgat atctttttgg tagctcacgt
      181 tcgctctcaa atttgtttac gtaaacgcaa aaaagtaggt attacttcta attgattgac
      241 tattacactt aaacttgata actttatggc gtaatcggag ttttaggatt agtgtatttg
      301 ttattatttt taaaagttgg ggattttgag ggtgtttttt agtaggtcac ttgagtgtgt
      361 aggtaaggtg tttgatgaaa tgtctcaata ggataactaa ctgtgttttt gaggtctgtt
      421 tgttggtgaa ttgcatttaa tttagagttc gataaagtgg cgaaaatgag tttgggtgcg
      481 gcagaagatg attcgggaac ggagattcat ctacctgctg acattgattg ggagatgctt
      541 gataaatcaa agtttttctt tttaggtgct gcgttgtttt cgggtgtttc tgggatgtta
      601 tatcccattg tggtgttgaa aacgcgtaaa caagtgcttt taaaagacat gccttgtctt
      661 aagttaggtg tttcgataat gaaacatgaa ggttgtaggg gtttttatag aggttttggg
      721 acgtctttaa tgggtacgat tccggctaga gcgctttaca tgggagcttt ggagatgacc
      781 aagagtaatg tgggttgtgt tacagtgaaa atggggtttt cagaggccaa agcagctgct
      841 attgcgaatg ctgcggctgg gttgagtgca gccatggctg cccagttggt ttggacaccg
      901 attgatgttg tgagccagag actcatggtt cagggaggta acggggccca ccctagcgcg
      961 ttgagtgcag ttagatacaa cggtggtatt gatgcgttta ggaaaatcgt ccaaactgat
     1021 ggtgttcgtg ggttgtatag aggatttggg atatcgattc tgacttatgc cccatccaat
     1081 gctgtatggt gggccgctta ttccatggct catcgtgcgg tttggggcgg ggttggttgt
     1141 tactatataa agaaagaggg aaatggcggt ggtggggtcg gatttacacc ggattcgaag
     1201 gcggtagtgg cggtgcaggg ggtgagtgcc gccatggcta gtgggttttc ggcggtggtt
     1261 acaatgccgt tggataccat caagacacga ctacaagtgt tagatggaga aggtagtaac
     1321 gggaagccga gtattggtca aactgtaagg aatatggtga aggaaggtgg tttgagtgct
     1381 tgttatagag ggttgggccc acgatgggct tcgatgtcca tgtctgcaac tacaatgatc
     1441 accacctatg agttccttaa gaggctttct accaagaatc aagattgtca cacaatcggt
     1501 tgaggacatc atcaatacag taaagaaacc actacttttg atgacttaat ttagaaaaag
     1561 tttgaaaatc gaaaagggtt gttggtatac aaatgtaaat aactgttaat aggtaggtgc
     1621 aagtcgttat atggttatca agtttcttgt ttatggtcat gatcaataat ctaatcaatc
     1681 tttatttgga agaatagaat caacttttat atgcatagcg actgcagtct gataaacacg
     1741 ctttacacaa aagtacattg cacgtatgat atgtatatga gtgtgtcgca atgtatatcc
     1801 ttcatatata gtatttacaa aatcaagatc caaccatggc ctccatcaag aattcaaaat
     1861 atatgttaca cttcgggaga ttgttttgac gctgcaccat ggcctgagtt gtctgtggtt
     1921 gtcatgtttt cttcatcatg atcgagcaag gcgtattttt tggctaaaga agtggtttac
     1981 caaattatag gtacatagat aggtacatgc taatataaga tgaaagttgt tttgtgaatc
     2041 agactctgta ggaagttgtg gcttgtgagt tagttaccat atcccttaca atatgaatgt
     2101 atagagtttg tttctgaaat gcatgcctca agagcctgac gttcctttat cagattcaat
     2161 gtatatggag catttgctga ttttttgttg ttttttataa gaaatgaaat tgcattttct
     2221 ttatatgtag tactact
//
LOCUS       XM_071885960            1304 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides PHD finger protein
            ALFIN-LIKE 4-like (LOC139904026), mRNA.
ACCESSION   XM_071885960
VERSION     XM_071885960.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1304
                     /gene="LOC139904026"
                     /note="PHD finger protein ALFIN-LIKE 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins"
                     /db_xref="GeneID:139904026"
     CDS             252..1034
                     /gene="LOC139904026"
                     /codon_start=1
                     /product="PHD finger protein ALFIN-LIKE 4-like"
                     /protein_id="XP_071742061.1"
                     /db_xref="GeneID:139904026"
                     /translation="MDGSQPYNPRTVEEVFRDFKSRRAGILKALTTDVEDFYQQCDPE
                     KENLCLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMPEKDWLALVAVHGDAWL
                     LAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVSGAAKKQVKEKTSVSNHSSSKSK
                     SNSKAKGPEPQTKFPKASVPKEDDDEDDEEGLDEEEEDEEHGDTLCGSCGENYASDEF
                     WICCDVCEKWFHGQCVKITPARAEHIKQYKCPACTTNKRSRP"
     misc_feature    285..668
                     /gene="LOC139904026"
                     /note="Region: Alfin; pfam12165"
                     /db_xref="CDD:463480"
     misc_feature    864..1016
                     /gene="LOC139904026"
                     /note="PHD finger found in plant Alfin1-like (AL)
                     proteins; Region: PHD_AL_plant; cd15613"
                     /db_xref="CDD:277085"
     misc_feature    order(903..920,927..929,933..935,942..944)
                     /gene="LOC139904026"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:277085"
     polyA_site      1304
                     /gene="LOC139904026"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttaaaggta caaatctagg gtttttttct tcttaacggg ccaaatccaa catccatcca
       61 tggatatctg agagtcaaat tcttctctat ttttaatcaa aatcattcaa tttcgatcca
      121 atttcatctc ttcttccagc ccaggtcaac caatttctcc aatttttcat tcccccaaat
      181 ttcaattttt gttcgatcct tagggtacta tcgcgtacgt actctacgta cttacatacg
      241 tacatacgaa gatggacgga agtcaaccct acaatcctcg aaccgttgaa gaagttttta
      301 gagattttaa gtctcgtaga gctggcatcc ttaaagccct tactactgat gttgaagact
      361 tttatcagca gtgtgatcct gaaaaagaaa acctatgtct gtacggtttt ccaaatgaac
      421 agtgggaagt gaatttgcct gccgaagagg taccacccga gcttcctgaa cctgcgttgg
      481 gtattaactt tgctagagac gggatgcccg aaaaggactg gctagcttta gttgcggttc
      541 atggtgatgc gtggcttctg gccgtggcct tctattttgg ggcccgattt ggattcgaca
      601 aagctgatag gaaacgcttg tttaacatga taaacgatct cccaacaatt ttcgaagttg
      661 tgtctggggc tgctaaaaag caagtgaagg agaagacttc tgtgtcaaac cacagcagca
      721 gcaaatcaaa gtcaaactca aaggcaaaag gccctgaacc acagacgaaa tttccaaaag
      781 cttcagtacc aaaagaagat gatgatgaag atgatgaaga gggtttggat gaagaagaag
      841 aagatgagga gcacggggac acattatgtg gttcctgtgg tgagaattac gcatctgatg
      901 agttctggat ctgctgcgat gtatgtgaga aatggttcca tggtcaatgc gtcaagataa
      961 ctccagcaag agccgagcat atcaaacagt acaagtgccc ggcttgtacc acaaacaaga
     1021 gatcacgccc ttgattgcaa tcacactggt aaggaaatga aatgaaatga aatgaagaat
     1081 cttgttgttt tatggagttt gatttaatta atcgttagtt gttgtggaaa gtggaagtta
     1141 aaactggttc tagtgatgct ttgtagggtt taaatgtgca ttttatttta ttttaaagtt
     1201 attagttgca ggtttttaat cttagttgtt aagtactgta gaattctatg gtgcaacaaa
     1261 acattttctt tgttataatg aaagtttgaa ttctatgtgt tcta
//
LOCUS       XM_071885961            2073 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SUPPRESSOR OF GENE
            SILENCING 3-like (LOC139904027), mRNA.
ACCESSION   XM_071885961
VERSION     XM_071885961.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2073
                     /gene="LOC139904027"
                     /note="protein SUPPRESSOR OF GENE SILENCING 3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139904027"
     CDS             100..1854
                     /gene="LOC139904027"
                     /codon_start=1
                     /product="protein SUPPRESSOR OF GENE SILENCING 3-like"
                     /protein_id="XP_071742062.1"
                     /db_xref="GeneID:139904027"
                     /translation="MSSKRGGGQSNKGKAIASSSNVNVDKLYQAVHNVNLDSSRDDDW
                     EVFFKKNKNKSGNSAASKQYQAPGANVRVQPESQRSSGRGKGQVRAQNNAQGLRTGGR
                     GGASNYIATSNTITPPLQSGWNWNSRPANAGRRANVPVPQPEEDDNDIKELEESDDEF
                     HSDEYEDEDEDDYDEEPKSHEERKKNKWYSNLFGTLDTLKLDQINEPMRQWHCSACQN
                     GPGATEWYDGLQSLVTHAKTKGSKRVKIHRELAEILEEELRIRGASVIPAGEFFGQWK
                     GLNDAVKDMEIVWPPTVIIRNTQLEQDDNDKWLGMGNLELLDYFGSDDAVRASHSYVP
                     KGHKGIGVLIFESSAIGYTEAKCLSKHFKREGVGRDAWDNRPILFLPGGKRQLYGYMA
                     NKRDIEIFNQHSQGKDNKLKFELVSYQEKVVNQFKQMNEDNQQLHYLQNEVKKEQMRR
                     KAAEESLDIVSQKLRKNEQQTLIVRERTQRYHEQNTEQMDYQELFIKNELKVIQDDRI
                     GKESQFDKLQKSVNPNEREEKLEELKEFEEEREKLAKIHEDKVAELKKRYWMEEVALQ
                     EGYNADLYQLMDKYTPKS"
     misc_feature    949..1293
                     /gene="LOC139904027"
                     /note="XS domain; Region: XS; pfam03468"
                     /db_xref="CDD:460933"
ORIGIN      
        1 aataaatact ctcctttttt agcaccctct ctttttcttc ccggtactcc ggtagtacta
       61 tcactatcat ccccttgctc ccaatttccg atttcaacga tgagttctaa aagaggaggt
      121 ggtcagtcta acaagggtaa agctatagca agcagttcaa acgtgaacgt tgataagttg
      181 taccaggcgg ttcataatgt gaatctcgat tccagtcggg atgatgattg ggaggttttt
      241 tttaagaaaa ataaaaataa atctggaaac agtgctgctt caaaacagta tcaggctcct
      301 ggagcaaatg tgcgggttca acctgaaagt cagagatcta gtggccgtgg aaaagggcaa
      361 gttagggctc aaaacaatgc tcagggacta cggactggtg gtagaggtgg cgctagtaat
      421 tacattgcca cctcgaatac gattactcca ccactgcaga gtgggtggaa ctggaattcg
      481 aggccggcta atgcagggcg gagggctaac gtgccggttc ctcaaccgga agaagatgat
      541 aatgacatca aggaacttga agaatcggat gatgaatttc atagtgatga gtatgaggat
      601 gaagatgaag atgattatga tgaagaaccg aaaagccatg aggagagaaa gaagaataag
      661 tggtattcta acctttttgg gactttagat acgttgaaat tagaccagat caatgaacca
      721 atgaggcagt ggcattgttc ggcttgtcag aatggtccag gtgctactga atggtatgac
      781 ggcctacaat ccctcgtgac acatgctaaa acaaaaggtt ccaaacgggt aaaaattcat
      841 agagaacttg ctgaaattct ggaagaagag ttgcgaataa ggggagcttc ggttataccg
      901 gctggtgaat tttttggtca gtggaaggga ttaaatgatg ctgtaaaaga tatggaaata
      961 gtgtggccac caacggttat cattaggaat acacagctcg aacaagatga caatgataag
     1021 tggcttggaa tgggaaacct ggaactttta gattactttg gatctgatga tgcagtgaga
     1081 gccagtcatt cgtatgtgcc aaaaggccac aagggtatag gtgtgctgat attcgagtcg
     1141 tcagctatag gctacacaga agctaaatgt ctaagcaagc attttaaacg ggaaggtgta
     1201 ggccgagatg cgtgggataa tcgccctatt ctgttcttac ctggtggtaa acgacaattg
     1261 tatggctaca tggcaaacaa aagagatatt gaaatattta atcagcattc tcaaggaaaa
     1321 gataataagt tgaagtttga attagtctct taccaagaaa aggttgttaa tcagtttaaa
     1381 caaatgaatg aagataacca acaattacat tatttacaaa acgaagtcaa aaaagaacaa
     1441 atgcgcagaa aagcagccga agagtcatta gacattgtgt ctcagaagct aaggaaaaat
     1501 gaacaacaaa cacttattgt aagggagaga actcaacggt atcatgagca aaatacggaa
     1561 cagatggatt accaagaatt gttcataaaa aacgagctga aggtaatcca agatgaccgg
     1621 attggaaaag aaagccaatt tgataagctg cagaaatcgg tcaatcctaa tgagagggag
     1681 gagaaacttg aggaactgaa agaatttgag gaagaacggg agaagctggc aaaaatacat
     1741 gaagataagg tggctgaatt gaagaagagg tattggatgg aagaggttgc gttgcaggag
     1801 ggatataatg ccgatttgta tcaattgatg gataagtaca cccccaaatc ataaatgtaa
     1861 gactgatgaa gtagagaatg aagagagtta atcaatgaca ttatctaatt accataagac
     1921 ttcttttata ttgtatatag atataaatat agatatatag atttacatag atatagatat
     1981 atagatttac ttaaaaaaga aactttacat accttaaggt ttaatctgca atcacagttt
     2041 agacatgaaa acacttgagt tgcggctggt atc
//
LOCUS       XM_071885962            2333 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904028), transcript variant X1, mRNA.
ACCESSION   XM_071885962
VERSION     XM_071885962.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2333
                     /gene="LOC139904028"
                     /note="uncharacterized LOC139904028; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904028"
     CDS             115..2043
                     /gene="LOC139904028"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742063.1"
                     /db_xref="GeneID:139904028"
                     /translation="MEPPVAAEVETKSEKTGEKERAKSYDCGLCDTEVVYKIAQELLP
                     GLASACVDNTTGGLFTSAGSIAVDMRNEMADYLTQRSETYVAEFLLSENASGLELSEH
                     PYDIIINLIDDFSASKTNMFSRVSEWVLSDRREDRIEDFVQEMEIHGFWLLARRECIA
                     TILLKNVDYKNAFHCNMVCSSEEEIVKHRAECKFRSMDCTNEGCTTRYCAAQKEHHEA
                     ICPFMVLPCEQKCPDFVLRREMDRHCVTICPMKLVNCAFYTVGCKSSIPRCNVQQHNV
                     DELSSHLLYIIRKAHKEANDDDLKRRVEQLQSLSNIEKLARARDARALTYLIKDAESK
                     LGPLDVKSKPPTDESADSPSHEEINKNELPPTKTEPVEKDGSDVPKKNEELIGSQPNN
                     EIRSSTEKPSITEEDTKLPTKEVGPESPNPVESTITKESYADPPVQIEESKDKGKSSS
                     PAKKEQDVNSGLLKKDDDLRTLQDDNKGLEARDKEQTGSPIKRAIEEKSEREEEEKDM
                     STNAVSEESIKSLLKESISEALSGDPKESKKSFEEVSKQLSSSDEEETEKSPKKETLK
                     QSLKDDDDEKELSKLTNEEIVKDSLSQMQTPSLSQMQTPRDSLSQMQTPLEPSSLMQT
                     PHDSSSDDDVSMKSPSSR"
     misc_feature    760..936
                     /gene="LOC139904028"
                     /note="TRAF-type zinc finger; Region: zf-TRAF; pfam02176"
                     /db_xref="CDD:280357"
     misc_feature    <976..1869
                     /gene="LOC139904028"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
ORIGIN      
        1 attttttatt tttattttgt aaataataaa ttataaaaaa ttcaagtatg atgcgttaat
       61 ggcgatcacg tttaaaagat tacggagtaa ttaacaggat aactattacc gatcatggaa
      121 cctcctgtag ctgcagaagt agaaaccaaa tctgagaaaa ctggtgaaaa ggaacgtgct
      181 aaaagttatg actgcggact ttgcgatact gaagttgtct acaaaatagc acaagaactc
      241 ctccctggat tagcgtcagc atgcgttgac aacacgacag gtggcctttt cacaagtgct
      301 ggttcaatag ctgttgatat gagaaatgag atggctgatt atttaacaca aagaagtgag
      361 acatacgtgg ctgaattttt actatcagaa aatgcgtctg gattagaatt atctgaacac
      421 ccatatgata taatcattaa tcttattgat gatttttctg cctctaaaac aaatatgttt
      481 agtcgggttt ctgaatgggt tttaagtgac agaagagagg ataggattga agattttgta
      541 caagaaatgg aaattcacgg tttttggtta ttagctcgaa gagaatgtat tgctacaata
      601 ttacttaaga atgttgacta caagaatgca tttcattgta atatggtatg tagttctgag
      661 gaagaaattg tgaagcatag agcagaatgc aagtttagat ctatggattg tacaaatgag
      721 gggtgtacaa ctaggtattg tgcggctcaa aaagaacatc atgaagccat ttgtcctttt
      781 atggtactcc cgtgtgagca aaaatgcccg gattttgttt tgaggcgtga gatggatagg
      841 cattgtgtaa ctatctgtcc aatgaagctt gtaaattgtg cattttatac ggtgggatgc
      901 aaatcaagca tacctagatg caatgttcaa caacacaatg ttgatgagct ctcttctcac
      961 ttgctttata tcataagaaa agctcacaag gaagctaatg atgatgatct caaacgtaga
     1021 gtggaacaac tccaaagtct atcaaatatt gaaaagttgg ctagagcacg ggatgcacga
     1081 gcattgacat atttgatcaa agatgctgaa tcgaaacttg gaccgctcga tgtcaaatcc
     1141 aagccaccca ctgatgaatc tgctgactca cctagccatg aggagatcaa taaaaacgag
     1201 ttaccaccca caaaaacaga gccagtagaa aaagatggct ctgacgtacc caaaaagaac
     1261 gaagagctca taggatcaca gcccaacaat gaaataaggt cgtcaactga aaaaccttcc
     1321 ataactgaag aggacactaa gttacccacc aaagaagtgg gcccagaatc accaaatcct
     1381 gtggaatcta caatcacgaa agaaagttat gctgacccgc cagtccaaat agaggaaagt
     1441 aaagataagg ggaagtcatc atcaccagct aaaaaagaac aagatgtaaa tagtggttta
     1501 ttaaaaaagg atgatgattt aagaacttta caagacgaca ataaaggatt agaagccaga
     1561 gataaagagc aaacagggtc accaataaaa agagcgattg aggaaaagtc cgagagagaa
     1621 gaagaagaga aagatatgtc tacaaatgct gtgagtgagg agtccataaa atcactctta
     1681 aaagaatcaa tcagtgaggc attaagtggt gatccaaaag aatccaagaa gtcgtttgaa
     1741 gaagtaagca aacaattatc aagtagtgat gaagaagaaa ccgagaaatc acctaaaaaa
     1801 gagacactca aacagtcatt aaaagatgat gatgatgaaa aagagttatc aaagttaact
     1861 aacgaagaaa tagtcaaaga ttcattgagc caaatgcaaa caccatcgtt gagccaaatg
     1921 caaacaccac gagattcact gagccaaatg caaacaccac tagagccatc tagcttaatg
     1981 caaacgccgc acgactcatc aagtgatgat gacgtatcga tgaaatcacc atcatcgaga
     2041 taaatcgtat caagtgagcg agttacattt tgaataccac attctcttat ataaagattc
     2101 tttttgttat ttattattag attgtgtcct cttggtaata tgaagcaagt aatgaatgtg
     2161 tagaagtacc actagaattt tttatagtca gaaaaacatc atctatatat cgttttaaat
     2221 ttcggttctg ataaacgggc cgtagtagat gaacatatat aattgggaca agatgacaaa
     2281 tccggagcag ggaagcatga gtcgtctttg tctttggcgt tggtcaagga aag
//
LOCUS       XM_071885963            2317 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904028), transcript variant X2, mRNA.
ACCESSION   XM_071885963
VERSION     XM_071885963.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2317
                     /gene="LOC139904028"
                     /note="uncharacterized LOC139904028; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904028"
     CDS             99..2027
                     /gene="LOC139904028"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742064.1"
                     /db_xref="GeneID:139904028"
                     /translation="MEPPVAAEVETKSEKTGEKERAKSYDCGLCDTEVVYKIAQELLP
                     GLASACVDNTTGGLFTSAGSIAVDMRNEMADYLTQRSETYVAEFLLSENASGLELSEH
                     PYDIIINLIDDFSASKTNMFSRVSEWVLSDRREDRIEDFVQEMEIHGFWLLARRECIA
                     TILLKNVDYKNAFHCNMVCSSEEEIVKHRAECKFRSMDCTNEGCTTRYCAAQKEHHEA
                     ICPFMVLPCEQKCPDFVLRREMDRHCVTICPMKLVNCAFYTVGCKSSIPRCNVQQHNV
                     DELSSHLLYIIRKAHKEANDDDLKRRVEQLQSLSNIEKLARARDARALTYLIKDAESK
                     LGPLDVKSKPPTDESADSPSHEEINKNELPPTKTEPVEKDGSDVPKKNEELIGSQPNN
                     EIRSSTEKPSITEEDTKLPTKEVGPESPNPVESTITKESYADPPVQIEESKDKGKSSS
                     PAKKEQDVNSGLLKKDDDLRTLQDDNKGLEARDKEQTGSPIKRAIEEKSEREEEEKDM
                     STNAVSEESIKSLLKESISEALSGDPKESKKSFEEVSKQLSSSDEEETEKSPKKETLK
                     QSLKDDDDEKELSKLTNEEIVKDSLSQMQTPSLSQMQTPRDSLSQMQTPLEPSSLMQT
                     PHDSSSDDDVSMKSPSSR"
     misc_feature    744..920
                     /gene="LOC139904028"
                     /note="TRAF-type zinc finger; Region: zf-TRAF; pfam02176"
                     /db_xref="CDD:280357"
     misc_feature    <960..1853
                     /gene="LOC139904028"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
ORIGIN      
        1 aataaattat aaaaaattca agtatgatgc gttaatggcg atcacgttta aaagattacg
       61 gagtaattaa cagtttttca ggataactat taccgatcat ggaacctcct gtagctgcag
      121 aagtagaaac caaatctgag aaaactggtg aaaaggaacg tgctaaaagt tatgactgcg
      181 gactttgcga tactgaagtt gtctacaaaa tagcacaaga actcctccct ggattagcgt
      241 cagcatgcgt tgacaacacg acaggtggcc ttttcacaag tgctggttca atagctgttg
      301 atatgagaaa tgagatggct gattatttaa cacaaagaag tgagacatac gtggctgaat
      361 ttttactatc agaaaatgcg tctggattag aattatctga acacccatat gatataatca
      421 ttaatcttat tgatgatttt tctgcctcta aaacaaatat gtttagtcgg gtttctgaat
      481 gggttttaag tgacagaaga gaggatagga ttgaagattt tgtacaagaa atggaaattc
      541 acggtttttg gttattagct cgaagagaat gtattgctac aatattactt aagaatgttg
      601 actacaagaa tgcatttcat tgtaatatgg tatgtagttc tgaggaagaa attgtgaagc
      661 atagagcaga atgcaagttt agatctatgg attgtacaaa tgaggggtgt acaactaggt
      721 attgtgcggc tcaaaaagaa catcatgaag ccatttgtcc ttttatggta ctcccgtgtg
      781 agcaaaaatg cccggatttt gttttgaggc gtgagatgga taggcattgt gtaactatct
      841 gtccaatgaa gcttgtaaat tgtgcatttt atacggtggg atgcaaatca agcataccta
      901 gatgcaatgt tcaacaacac aatgttgatg agctctcttc tcacttgctt tatatcataa
      961 gaaaagctca caaggaagct aatgatgatg atctcaaacg tagagtggaa caactccaaa
     1021 gtctatcaaa tattgaaaag ttggctagag cacgggatgc acgagcattg acatatttga
     1081 tcaaagatgc tgaatcgaaa cttggaccgc tcgatgtcaa atccaagcca cccactgatg
     1141 aatctgctga ctcacctagc catgaggaga tcaataaaaa cgagttacca cccacaaaaa
     1201 cagagccagt agaaaaagat ggctctgacg tacccaaaaa gaacgaagag ctcataggat
     1261 cacagcccaa caatgaaata aggtcgtcaa ctgaaaaacc ttccataact gaagaggaca
     1321 ctaagttacc caccaaagaa gtgggcccag aatcaccaaa tcctgtggaa tctacaatca
     1381 cgaaagaaag ttatgctgac ccgccagtcc aaatagagga aagtaaagat aaggggaagt
     1441 catcatcacc agctaaaaaa gaacaagatg taaatagtgg tttattaaaa aaggatgatg
     1501 atttaagaac tttacaagac gacaataaag gattagaagc cagagataaa gagcaaacag
     1561 ggtcaccaat aaaaagagcg attgaggaaa agtccgagag agaagaagaa gagaaagata
     1621 tgtctacaaa tgctgtgagt gaggagtcca taaaatcact cttaaaagaa tcaatcagtg
     1681 aggcattaag tggtgatcca aaagaatcca agaagtcgtt tgaagaagta agcaaacaat
     1741 tatcaagtag tgatgaagaa gaaaccgaga aatcacctaa aaaagagaca ctcaaacagt
     1801 cattaaaaga tgatgatgat gaaaaagagt tatcaaagtt aactaacgaa gaaatagtca
     1861 aagattcatt gagccaaatg caaacaccat cgttgagcca aatgcaaaca ccacgagatt
     1921 cactgagcca aatgcaaaca ccactagagc catctagctt aatgcaaacg ccgcacgact
     1981 catcaagtga tgatgacgta tcgatgaaat caccatcatc gagataaatc gtatcaagtg
     2041 agcgagttac attttgaata ccacattctc ttatataaag attctttttg ttatttatta
     2101 ttagattgtg tcctcttggt aatatgaagc aagtaatgaa tgtgtagaag taccactaga
     2161 attttttata gtcagaaaaa catcatctat atatcgtttt aaatttcggt tctgataaac
     2221 gggccgtagt agatgaacat atataattgg gacaagatga caaatccgga gcagggaagc
     2281 atgagtcgtc tttgtctttg gcgttggtca aggaaag
//
LOCUS       XM_071885964            2813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mechanosensitive ion channel
            protein 10-like (LOC139904029), mRNA.
ACCESSION   XM_071885964
VERSION     XM_071885964.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2813
                     /gene="LOC139904029"
                     /note="mechanosensitive ion channel protein 10-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139904029"
     CDS             314..2581
                     /gene="LOC139904029"
                     /codon_start=1
                     /product="mechanosensitive ion channel protein 10-like"
                     /protein_id="XP_071742065.1"
                     /db_xref="GeneID:139904029"
                     /translation="MDANGKNIKTGEISMTENKKSGEVVVTISGEEKDIRISKGVPES
                     PHRKSVDTYPENAVFMRSPNRPPKIPNPETLTRRKTLARSVYSKPKSRFGEQQTLIDH
                     NMFAEMDEQVGQTSNSPVRSNRASPNGTPSKETVRTVSITPKTPFMASPGPAGSLDED
                     EEIYKKVNIRKNLKYKRVKMKVLFEWVVFLFLLGCLISSLTINELKRYKLWSLELWKW
                     VVQIMVIICGMLVTNWLMHFIVLLIELNFLLRKKVLYFVHGLKKSVQVCIWLIVVLGT
                     WTFLFNSQDVERSKTASKVLDYITWSIVALLVGGILWLLKTLLLKILATSFHVSNFFD
                     RIQESIFLQYVMLTLSGPPVMESLEMVGASTSVSQMNLEVKRKGKETKTKEVIDVSKL
                     HQIKREKVSAWTMKMLVDVISSSGLSTFSGVIEESAYERPSESADKEITNEMEAIAAA
                     YHIFRNVAQPGSTYIEDLDLRRFMIKEEVDIVFPMIDVADKGQIDRKTLTEWVVKVYN
                     GRKALAHALSDTKTAVKQLDKLVTAVLIVIVAVVWLLLTGIASTKVLVLLSSQLVVAA
                     FIFGNTCKTIFEAIVFVFIMHPFDVGDRCCIDDVQLVVEEMNILTTVFLRYDNEKIYY
                     PNSVLSTKPISNFYRSPDMSDKVEFAIDFATPFEKIGLLKEKLKKYLEKNPQLWHPNH
                     NFVVQEIENINKIKVGFFFNHTINFQDYGEKSKRRSELVLEIKKLLEELKIKCYLLPQ
                     DVHLHHSDTTIAPTK"
     misc_feature    1943..2515
                     /gene="LOC139904029"
                     /note="Mechanosensitive ion channel; Region: MS_channel;
                     pfam00924"
                     /db_xref="CDD:459999"
ORIGIN      
        1 actttaatca ttcacttgtc taaaagaaaa acatttattc atcttgttat tagtcttttt
       61 gaacctttta ttttataatt tatgtttata tgtttatgtt tattttatta ttattattac
      121 taacagtaaa gtaaagtaat attgtatact cttatatatt agtagtatta attaatttta
      181 atattatttg tgttactaaa tcacgaaaac tgacacaatc tatggaaaca ttagccctaa
      241 ttcagtccag tcgtcttgtt aatggcaaat gcttgaagta aaagctgctc cagtttcagg
      301 gtttagtatt tgaatggatg caaatggtaa aaacataaaa acaggggaaa taagtatgac
      361 agagaacaaa aagagtggtg aagtggtggt aacaatctcc ggtgaagaga aagatatcag
      421 aatttcgaaa ggtgttccgg aatcacctca cagaaagtcg gttgacacgt accccgaaaa
      481 tgctgttttt atgcgaagcc caaaccggcc tcctaaaatt cccaatcccg aaacgttaac
      541 cagacggaag acattagcga gatcggttta ctcgaagcca aagtctaggt ttggtgaaca
      601 acaaactttg attgatcaca atatgtttgc agaaatggat gaacaagttg gtcaaacttc
      661 aaactcgccc gttaggtcga atcgggcttc accaaatggt acaccgtcaa aggaaacagt
      721 aaggacggtt tcaataactc cgaaaactcc attcatggcg tcaccgggac ccgcagggtc
      781 gcttgatgaa gatgaagaga tttacaagaa ggttaacata cggaagaatt taaagtacaa
      841 gagggtgaag atgaaagttt tatttgaatg ggtagtgttt ctgtttcttt tgggctgttt
      901 aatttctagt ttgactatta acgaattgaa gcgttataag ttatggagtt tggagttatg
      961 gaaatgggtt gtgcagataa tggtaatcat ttgtggtatg ttagtcacca attggcttat
     1021 gcatttcatc gtgttgttga tcgaattgaa tttcttgttg aggaaaaagg ttttgtattt
     1081 tgttcacggg ttgaagaaga gcgttcaagt atgtatatgg ctcatagtcg ttcttggtac
     1141 gtggacgttt ttgtttaata gccaagatgt tgaaagatcg aaaaccgcaa gtaaggtttt
     1201 ggactatatt acatggagta tcgttgccct attggtgggt ggtatcttgt ggcttttaaa
     1261 gactttattg ctaaaaattc tggcgacatc attccacgtc agcaatttct tcgataggat
     1321 tcaagaatcg atctttcttc agtatgttat gttaaccctc tcgggcccac cagttatgga
     1381 atcactagaa atggttgggg cgagtacaag tgttagtcag atgaatttgg aggtaaaaag
     1441 gaagggtaaa gagacgaaaa cgaaagaagt gatcgatgtg agtaaattac atcagataaa
     1501 acgagaaaag gtgtctgctt ggactatgaa aatgttggtt gatgtgatat caagttcggg
     1561 gctttcgact ttttctggtg tgattgaaga aagtgcgtat gaaagaccga gtgagtctgc
     1621 agataaggag attactaatg agatggaagc aattgctgct gcttatcata tttttagaaa
     1681 tgtcgcgcag cctggttcta catatatcga agatttggat ttaaggagat tcatgatcaa
     1741 ggaagaggta gatattgtgt ttccaatgat tgatgtggct gataaaggac aaattgatcg
     1801 taaaacctta acagaatggg tggtcaaagt ttataatggt cgtaaagctt tagcacacgc
     1861 tttaagtgac acgaaaacag ccgtaaagca gttggacaag ctcgttactg ctgtcctaat
     1921 tgttatcgta gcagttgtgt ggcttctttt gacaggaata gcttccacaa aagtacttgt
     1981 tttactctca tcacagcttg ttgtggctgc ttttatattt ggcaatactt gcaagaccat
     2041 ttttgaagct atcgtgttcg tatttatcat gcatccattt gacgttggtg accgttgttg
     2101 cattgatgat gttcagttgg tagttgaaga gatgaatatc ttaacaacgg ttttcttgag
     2161 atatgataat gaaaagatat attatccgaa ttctgttttg tctacgaagc ccatcagtaa
     2221 tttctataga agcccagata tgagcgataa agtggaattc gctattgatt tcgctacacc
     2281 gtttgagaag atcgggctat tgaaagagaa gctaaagaag tatttggaga agaatccgca
     2341 attatggcac ccgaatcaca attttgttgt gcaggagatt gaaaatataa acaagattaa
     2401 ggtgggcttc ttttttaatc acacgataaa ctttcaagac tacggtgaaa agagtaagag
     2461 gagaagtgag ctggttttgg agataaagaa actacttgaa gagctgaaaa tcaaatgtta
     2521 tctccttcca caagacgttc acttgcatca ttcggataca acaattgcac ccacgaaata
     2581 ataacacgtc ctcactaaaa aggtttcacc tttcatttct ataaattcgt aactaagctt
     2641 ccttcactat atttgtaagt ctccgtgtac caaatgttgt gggtttaagt ccactgtggg
     2701 acatagatga ataggtgtgt atggttaaaa cagttagaat cctgtgaaca ataaccatat
     2761 tgtgtatcta tattttgtga catatcacat atgtatgaaa atactagtag ttt
//
LOCUS       XM_071885965            1507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxisome biogenesis factor
            10 (LOC139904030), mRNA.
ACCESSION   XM_071885965
VERSION     XM_071885965.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1507
                     /gene="LOC139904030"
                     /note="peroxisome biogenesis factor 10; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904030"
     CDS             63..1271
                     /gene="LOC139904030"
                     /codon_start=1
                     /product="peroxisome biogenesis factor 10"
                     /protein_id="XP_071742066.1"
                     /db_xref="GeneID:139904030"
                     /translation="MGTEIGESSGAGPSDTNSGRDDAGNGTTTTSTSTTLRRRFPLAA
                     QPEIMRAAQKDDQYASFVYEACRDAFRHLFGTRAAISYQSETKLLGQILYYILTTGAG
                     QQTLGEEYCDITQVAGSYGLPPTPARRALFIVYQSAVPYIAERVSSRIASRGIALTEL
                     LSDDLETSGSGQDQLSVTQASSSSSPRVSSSPLVRLKEKIGHLWLHTVRRWPAVLPLA
                     REFLQLVLRANLMFFYFEGLYYHISKRAAGIRYVFIGKPMSQRPRYQILGMFLLVQLC
                     IIAAEGLRRSNLASITTSVQNTSLRVHQASGGRGLPVLNEEGNLIIGDSAKDFGVSDS
                     VTTSESQSSGISKCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPLTHS
                     TLVCLYHSDF"
     misc_feature    225..917
                     /gene="LOC139904030"
                     /note="Pex2 / Pex12 amino terminal region; Region:
                     Pex2_Pex12; pfam04757"
                     /db_xref="CDD:398431"
     misc_feature    1098..1253
                     /gene="LOC139904030"
                     /note="RING finger, HC subclass, found in peroxin-10
                     (PEX10) and similar proteins; Region: RING-HC_PEX10;
                     cd16527"
                     /db_xref="CDD:438190"
     polyA_site      1507
                     /gene="LOC139904030"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgaaataaa aaataaatgg aaagcagagc aactctaccc tacctgagat tcgacaacaa
       61 aaatgggaac tgaaatcgga gaatcttccg gtgccggacc ttccgataca aattccggca
      121 gagacgatgc tggtaacggt accactacca ccagtacatc cacaacctta cgccgccgct
      181 ttcccctggc ggctcagcca gagataatga gagctgcgca aaaggacgac caatacgctt
      241 ctttcgtcta cgaagcttgt cgagacgcct ttcgccactt attcggtacc agggctgcta
      301 tatcatatca gagtgagaca aagcttttgg gccagattct gtattatata ttaacaacag
      361 gggcagggca acagacattg ggagaagaat attgtgatat cacacaggtt gcgggatcat
      421 atggacttcc tccaacaccg gcaaggcgtg ccctatttat tgtataccag agtgcagttc
      481 cctacattgc cgaaagagtc agctctagaa ttgcttctcg tggcattgcg ttgacagagt
      541 tactgtctga tgatctagaa acttccggaa gcggccaaga tcagttatct gttactcaag
      601 cgtcttcatc ttcttcacca agagtttcca gctcacctct tgtaagattg aaagagaaaa
      661 ttggtcacct ttggttgcac acagttcgga gatggcctgc agtgcttcca ttagcccgtg
      721 agtttttgca gttggttctt cgagctaatc ttatgttttt ctattttgaa ggtctatatt
      781 atcatatatc aaagcgtgca gcaggcattc gttatgtttt tattggaaag ccaatgagtc
      841 aaaggccaag atatcaaata ttgggcatgt ttctattagt tcagttatgt attatcgcgg
      901 ctgaagggtt gcggcgtagc aacttagcat ccattacaac ttcagttcag aatacatctt
      961 taagggtcca tcaagcatca ggagggcgag gattacccgt tttaaatgaa gagggaaatt
     1021 tgattattgg ggacagtgcc aaggattttg gtgtatctga ctcagtgaca acttcagagt
     1081 ctcaatcaag tgggattagc aaatgtacac tttgccttag taatcgccaa aatcctaccg
     1141 caactccttg tggtcacgtg ttttgctgga attgcatcat ggaatggtgt aatgaaaagc
     1201 ccgaatgccc tttatgtcga tctccactaa ctcattcaac tttagtttgt ttgtaccatt
     1261 cagattttta acacgcaatt atgccactat acgccacaaa aaatgcatgt ttgctgacat
     1321 gtaaagcttc aagaaacgtc tgcttaatct gaatcaccat gaaggtacat catgaagcgt
     1381 aataattgtc cctaaattct cagctccttt gcattgtata aatttatatt ttgtttaatt
     1441 ctgcatgtta tgttgtatgt aagaataatg tctgttaaat ctcaattaga taaatggtct
     1501 acattta
//
LOCUS       XM_071885966            1557 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides delta(12) fatty acid
            desaturase FAD2 (LOC139904031), mRNA.
ACCESSION   XM_071885966
VERSION     XM_071885966.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1557
                     /gene="LOC139904031"
                     /note="delta(12) fatty acid desaturase FAD2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 86 Proteins"
                     /db_xref="GeneID:139904031"
     CDS             151..1302
                     /gene="LOC139904031"
                     /codon_start=1
                     /product="delta(12) fatty acid desaturase FAD2"
                     /protein_id="XP_071742067.1"
                     /db_xref="GeneID:139904031"
                     /translation="MGAGGRMSDPANSNSKTEPETIQRVPYQKPPFTVGDIKKAIPPH
                     CFNRSVIRSFSYVIYDLTIIFILYYLANNYIQLLPKPLAYVAWPVYWAVQGCVSTGVW
                     VIAHECGHHAFSDYQWLDDTVGLILHSALLVPYFSWKYSHRRHHSNTGSIEHDEVFVP
                     KLKSGVRSTARYLNNPPGRILTLLVTLTLGWPLYLMFNVSGRYYDRFACHFDPNSPIY
                     SNREQAQIFISDVGIIAVLFVLFRIAMVKGLTWVLTMYAGPLLVVNGFLVLITFLQHT
                     HPSLPHYDSTEWDWLRGALATIDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEAT
                     KIIKPILGDYYQFDGTSIFKAMYRETKECIYVDKDAEVKDGVYWYSNKI"
     misc_feature    151..1296
                     /gene="LOC139904031"
                     /note="omega-6 fatty acid desaturase; Region: PLN02505"
                     /db_xref="CDD:178121"
     misc_feature    order(466..468,478..480,574..576,583..588,1096..1098,
                     1105..1110)
                     /gene="LOC139904031"
                     /note="putative di-iron ligands [ion binding]; other site"
                     /db_xref="CDD:239584"
ORIGIN      
        1 ttaaatagca gcccacttag cgtccgcaat aaaattaggc cggcaactta actcgccgga
       61 cggccatttc gttattcaga tccagattta catttcaatt caacaaatct aactctcaat
      121 ccttcctttc ttccttccga tcattgaaca atgggtgcag gtggtcgaat gtcagatccc
      181 gccaacagca acagcaaaac cgaacccgaa actatccaac gagtcccgta ccaaaaaccg
      241 cccttcacgg ttggagacat caaaaaagcc atcccacctc attgtttcaa tcgatccgtt
      301 atccgttctt tctcttacgt catctatgac ctcaccatca ttttcattct ttattacctt
      361 gctaacaact acatccaact cctccctaaa ccgctcgcct acgtggcgtg gcccgtttac
      421 tgggccgttc aaggttgtgt ttcaaccggg gtttgggtca tagcccacga atgtggccat
      481 cacgccttta gtgactacca atggctcgat gatactgtcg gccttatcct acattccgcc
      541 cttctcgtcc cgtatttctc atggaaatac agtcaccgcc gacatcactc caacacgggt
      601 tcgatcgaac acgacgaggt tttcgtcccg aaactaaaat cgggtgtacg gtcaaccgct
      661 cgatatctta acaacccacc gggccgtatc ctcacccttc ttgtcacact aaccctaggt
      721 tggcctttat acctaatgtt caacgtttcg ggccgatact acgatcgatt cgcgtgccat
      781 ttcgacccaa atagtcccat ttactccaac cgtgaacagg cccaaatatt catctccgat
      841 gtcgggataa tagccgtcct tttcgtactc tttcgaatcg caatggttaa aggactaaca
      901 tgggtattaa ccatgtacgc gggcccgtta cttgtggtca atggtttctt agtattaatc
      961 acattcttgc aacacacgca cccatcgtta cctcattacg actcaaccga atgggactgg
     1021 ttacgaggtg ctctagccac tattgaccga gactacgggg tcttaaacaa ggtgttccat
     1081 aacataaccg acactcacgt ggcccaccat ttgttctcta caatgccaca ttatcacgca
     1141 atggaggcca caaagataat caagccgatt ttgggagatt attatcagtt tgatggaacg
     1201 tcgattttca aggctatgta tagggaaaca aaggaatgca tttacgtcga taaagatgct
     1261 gaggttaagg atggggttta ctggtacagt aacaagatct gatcgttcga agcatgagta
     1321 ttaagagaat ggcaaaatcg tcttcctttt gttaagttgt gttatttagt gtatgtttgg
     1381 tttttgatgc atgtttaaga tggacatgga attgaattgt actagtcagt cagatgaata
     1441 actttgtact aagaacattg tgtttctaga ctatctgttt tagcatttta tttcgaatct
     1501 gtgtgttttt agttggcata tcatctaagt tatatttaga gcaataaaac ggtagta
//
LOCUS       XM_071885967            1067 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ylmG homolog protein 2,
            chloroplastic-like (LOC139904032), mRNA.
ACCESSION   XM_071885967
VERSION     XM_071885967.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1067
                     /gene="LOC139904032"
                     /note="ylmG homolog protein 2, chloroplastic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139904032"
     CDS             99..881
                     /gene="LOC139904032"
                     /codon_start=1
                     /product="ylmG homolog protein 2, chloroplastic-like"
                     /protein_id="XP_071742068.1"
                     /db_xref="GeneID:139904032"
                     /translation="MHSSITENSCNNNNQASTNANSTSLPLSTLHTSSLLFFKSTSII
                     ATNHFQKIVTESSNTFIHNIHNSIDKCINFMRLFASQNPLFTKLHSLSSEYHKFCQIN
                     CRNQKNLRLLSNHDFAAIIPGDSMAGLVVSNGVLNFLNIYNTMLVVRLVLTWFPNSPP
                     AIVGPLSTLCDPYLNIFRGVIPPLGGTLDLSPILAFLVLNALTSTASALPAELPSTKS
                     SQKESLRHAGPFHSAIFQLTSSQKKWMKRFDTKMSKGSSIDD"
     misc_feature    510..704
                     /gene="LOC139904032"
                     /note="YGGT family; Region: YGGT; pfam02325"
                     /db_xref="CDD:460533"
     polyA_site      1067
                     /gene="LOC139904032"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gaaaaattgg gctccaatca atccatacat cacaaaatcc tatcttcatc tcccttcttc
       61 actaccaaaa ctcaagaacc cttttctccc aaatcacaat gcattcttca attacagaaa
      121 actcatgtaa taataataat caagcatcca ccaatgcaaa ttcaaccagc ttacctcttt
      181 ccacacttca cacttcatct cttttgttct tcaaatccac atccatcata gctactaacc
      241 atttccaaaa gatagtcact gaatcatcca acacttttat tcacaatatc cataactcca
      301 ttgataaatg catcaacttt atgcgtttat ttgcttctca aaatcctcta tttaccaaat
      361 tgcattctct ttcttccgaa taccacaagt tctgtcagat caactgcaga aaccagaaga
      421 atttgaggtt actgtcgaat cacgactttg ctgctattat tccaggtgat tcaatggcag
      481 ggcttgtggt atctaacggt gtactaaatt tcttgaatat ctacaacaca atgttggttg
      541 tgaggctggt cctcacttgg tttcccaact ctcctccagc cattgtggga cccctcagca
      601 ctttatgtga cccgtaccta aacatctttc gtggggtcat ccctccgctc ggaggaactt
      661 tggatctttc tcctatactt gcattccttg tgctaaacgc tttaacgagc actgcttctg
      721 cacttcctgc tgagcttcca tccacaaaat catctcagaa agaatcatta cgtcacgcag
      781 gcccgtttca ttctgcaata tttcaactta cttcatccca aaagaaatgg atgaaaagat
      841 tcgatacaaa aatgtccaag ggctcaagca ttgatgacta aatgattgaa taatttgtac
      901 aacaactaga agcatgatac aaccatatca acaagtaatc tggaaatttc tgttactcga
      961 gctatgatag cagccttttt ggtatacaat aataataata attataatta tatttagtat
     1021 tctgtaaatt ttgaagttat atatacattt atgttactgt tgtttca
//
LOCUS       XM_071885968            1652 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides guanine nucleotide-binding
            protein alpha-1 subunit (LOC139904033), mRNA.
ACCESSION   XM_071885968
VERSION     XM_071885968.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1652
                     /gene="LOC139904033"
                     /note="guanine nucleotide-binding protein alpha-1 subunit;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 30 Proteins"
                     /db_xref="GeneID:139904033"
     CDS             92..1246
                     /gene="LOC139904033"
                     /codon_start=1
                     /product="guanine nucleotide-binding protein alpha-1
                     subunit"
                     /protein_id="XP_071742069.1"
                     /db_xref="GeneID:139904033"
                     /translation="MGLLCSRQKRGNQANTEENIQAAEIERRIEQETKAEKHIQKLLL
                     LGAGESGKSTIFKQIKLLFQTGFDERELQSYTSVIHANVYQTIKILHDGSKELALSEE
                     GSSKYALSIENKEIGEKLSEIGGRLDYPLLNEELVQDILKIWKDPAIQETYARGNELQ
                     LPDCADYFMENLQRLSDTNYIPTKEDVLHARVRTTGVVEIQFSPVGENKKSGEVYRLF
                     DVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLYEDENKNRMMETKELFEWVLKQK
                     CFEKTSFMLFLNKFDIFEKKVSKVPLNVCEWFKDYQPVTTGKQEVEHAYEFVKKKFEE
                     LYYQNVTCDHQDRVFKIYRTTALDQKLVKKTFKLLDETLKRRNLFEAGLL"
     misc_feature    209..1225
                     /gene="LOC139904033"
                     /note="Alpha subunit of G proteins (guanine nucleotide
                     binding); Region: G-alpha; cd00066"
                     /db_xref="CDD:206639"
     misc_feature    order(227..229,242..250,671..673,746..748,755..757,
                     953..958,962..964,1154..1159)
                     /gene="LOC139904033"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206639"
     misc_feature    227..250
                     /gene="LOC139904033"
                     /note="G1 box; other site"
                     /db_xref="CDD:206639"
     misc_feature    order(230..238,320..322,332..334,344..346,353..355,
                     362..367,440..442,449..451,575..577,662..664,755..757,
                     779..781,791..793)
                     /gene="LOC139904033"
                     /note="GoLoco binding site [active]"
                     /db_xref="CDD:206639"
     misc_feature    656..682
                     /gene="LOC139904033"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206639"
     misc_feature    671..673
                     /gene="LOC139904033"
                     /note="G2 box; other site"
                     /db_xref="CDD:206639"
     misc_feature    order(674..676,680..682,686..688,737..739,743..745,
                     755..763,767..769,776..781,785..796)
                     /gene="LOC139904033"
                     /note="beta - gamma complex interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206639"
     misc_feature    order(680..682,773..775,782..787,794..796)
                     /gene="LOC139904033"
                     /note="adenylyl cyclase interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206639"
     misc_feature    746..757
                     /gene="LOC139904033"
                     /note="G3 box; other site"
                     /db_xref="CDD:206639"
     misc_feature    749..799
                     /gene="LOC139904033"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206639"
     misc_feature    953..964
                     /gene="LOC139904033"
                     /note="G4 box; other site"
                     /db_xref="CDD:206639"
     misc_feature    order(1136..1147,1148..1165,1169..1180)
                     /gene="LOC139904033"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:206639"
     misc_feature    1154..1162
                     /gene="LOC139904033"
                     /note="G5 box; other site"
                     /db_xref="CDD:206639"
     polyA_site      1652
                     /gene="LOC139904033"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctcttttct ttcatttttc tctcacactc aacaaacaga tcactgtgaa gataccaaaa
       61 taattaattc tctctaaata tcgttcaaaa catgggctta ctttgcagta gacaaaagcg
      121 tggtaatcaa gctaacacag aagaaaatat ccaggcagca gaaatagaaa ggcgaattga
      181 gcaagaaaca aaggcagaga aacatattca gaaactttta ttacttggtg ctggagagtc
      241 aggaaagtca actattttta aacagataaa gttactcttt caaactggat ttgatgaaag
      301 agagctccag agttacactt cagtcattca cgcgaatgtc tatcagacaa taaaaatatt
      361 acatgacgga tcaaaggagt tggctctaag tgaagaaggt tcgtcaaagt atgccctatc
      421 cattgagaac aaggaaattg gagagaaact atcagaaatt ggaggcaggt tggattatcc
      481 cctccttaat gaagagctcg ttcaggacat tctaaagatt tggaaagacc cagccataca
      541 ggaaacatat gctcgcggga atgagcttca gcttcctgac tgtgccgatt atttcatgga
      601 aaacttgcag agattgtcag atacaaatta tattcctact aaggaggatg ttcttcatgc
      661 tcgtgttcgt acaacaggcg ttgtagaaat ccagttcagc cctgtcgggg agaacaaaaa
      721 aagcggtgaa gtatatagac tatttgatgt tggaggccag agaaatgaac gaaggaagtg
      781 gatccattta tttgaaggtg tgacagctgt catattttgt gctgctatta gcgagtatga
      841 tcaaacctta tatgaagatg aaaacaagaa ccgaatgatg gagacaaaag aactctttga
      901 atgggtctta aaacaaaaat gtttcgagaa aacatctttt atgctatttc taaacaagtt
      961 tgatattttc gagaaaaagg tttcaaaggt gcccctgaac gtatgcgagt ggtttaaaga
     1021 ttatcaaccg gttacaacag gaaagcaaga agttgagcat gcatacgagt ttgtgaagaa
     1081 gaaattcgaa gagctgtact atcagaatgt aacatgtgat caccaggacc gtgtgttcaa
     1141 gatctacaga actaccgctc ttgaccagaa actcgtgaag aaaactttca aacttttaga
     1201 cgaaacccta aaaaggagaa atctgtttga agcaggctta ttgtgacacc gaccaccata
     1261 ttcacatgct gctacaaatg tcaatatttc agaaaaagct tcatcaaatt ttttgacaat
     1321 gagatcaaca aaatcaatca gtatggtatt tcacaggtta aaacaaatta attttatatt
     1381 cgtggttcat tggttcattt aggctttggc cctaagtacc caccatatat tacttgggat
     1441 ctttttacat atattttctc catgtatgta gctttcttgg tgaaaaaacg aaggtaagat
     1501 ttatgatcat atacatctat ttaacttcta aatttgttgt ggttaaccca gacaagtata
     1561 aatgcagaat taggccactt catgtttttc tcttgacgtg tattgtttgg aactacaccg
     1621 taagatggaa ataataaccc aagatttgtg tc
//
LOCUS       XM_071885969            1128 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fatty-acid-binding protein 2
            (LOC139904034), mRNA.
ACCESSION   XM_071885969
VERSION     XM_071885969.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1128
                     /gene="LOC139904034"
                     /note="fatty-acid-binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139904034"
     CDS             139..1128
                     /gene="LOC139904034"
                     /codon_start=1
                     /product="fatty-acid-binding protein 2"
                     /protein_id="XP_071742070.1"
                     /db_xref="GeneID:139904034"
                     /translation="MQIKRSDFSVQTVKNCKNQHDLPRFFINYRRKALEIPEFLHKFS
                     RFAVKHLLGKAKDFQFVAAMSFAGNLVPPLNNTSSNYLSDSNVNGNAVVGENLNHNPC
                     DVEQWRCSDLNSGSYRCSKNALEPKTGIEFPTILENQRHFMSQVLVGIGSKAMTIIKI
                     KSLKIYAFGFYVQPYDVCNKLGSKYATLPENEVDKHNNFFSDLLREDISMSVRLVVSC
                     NGIKISTVRDAFEKSLRARLIKMNPETNYDCLRSFGSLFKEDISIKAGTTIKFQRTTD
                     GHLVTEIEGNRIGAVHSRDLCRAFFDMYIGDGPVSEQTKTEIGENVVNIMRRC"
     misc_feature    <163..1125
                     /gene="LOC139904034"
                     /note="Chalcone isomerase-like; Region: Chalcone_3;
                     cl03589"
                     /db_xref="CDD:446143"
ORIGIN      
        1 tcattagttg ataattctca atatcattcg aaacactggt gcaacaatgg aagtgttcct
       61 tttcaagaaa ctttcagtcg tatttcaaag tttactggca ctgcactgtt aaagtgtgct
      121 agtcgttcaa gttcaaatat gcaaataaaa agatctgatt tttctgttca aacggttaag
      181 aattgtaaga atcagcatga tctcccaaga tttttcatta attatagaag aaaagcactc
      241 gagattccag aatttcttca caaattctcg aggtttgcag taaaacattt attaggaaag
      301 gctaaagact ttcagttcgt tgctgcaatg tcgtttgctg gcaacttagt cccgccactc
      361 aacaatacat ctagcaatta tctttcagat tcgaatgtaa acggcaacgc agttgtgggg
      421 gaaaacttga atcataatcc atgtgatgtt gagcaatgga gatgtagcga tcttaattct
      481 ggaagttata ggtgttcgaa gaatgcactc gaacctaaaa ctggtatcga gttcccaact
      541 atattggaaa accaacgcca ttttatgtct caggttcttg ttggaattgg atcgaaagca
      601 atgacgataa tcaaaataaa gtcattaaag atctacgctt ttggtttcta tgttcaacca
      661 tacgatgtat gtaacaagtt gggttcaaag tacgctacac ttccagaaaa cgaggtggac
      721 aagcataata actttttttc tgatcttctc agggaggaca taagcatgtc tgttaggctt
      781 gtggtcagct gcaatggaat taaaattagt actgttagag atgcttttga gaaatcgctt
      841 cgagcccgat taattaagat gaacccggag actaattatg actgcttgag aagttttggt
      901 tcccttttta aagaggatat ttcaataaaa gcgggaacaa caataaaatt tcagagaacg
      961 actgatggac atcttgttac tgagattgaa ggcaatagga ttggtgcagt tcatagcagg
     1021 gatttatgta gggcattctt tgacatgtac attggagatg gtcccgtctc tgagcaaaca
     1081 aaaacagaga ttggagaaaa tgtcgtgaat ataatgagga ggtgctag
//
LOCUS       XM_071885970             622 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904035), mRNA.
ACCESSION   XM_071885970
VERSION     XM_071885970.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..622
                     /gene="LOC139904035"
                     /note="uncharacterized LOC139904035; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139904035"
     CDS             11..544
                     /gene="LOC139904035"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742071.1"
                     /db_xref="GeneID:139904035"
                     /translation="MFTNSQRQEERTGKYGTPRIQYLQELVAQFQNASTEEVKEKIAA
                     NLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLIEFGAGGICNSCVDPANAAVIIK
                     CDGIPLLIQCLSSPVKNTVNYAIGALYYLCNASTKEAILRPEVVDIIKRYAAAGAVSV
                     SFSNLAQSFLDKHIPEN"
     misc_feature    77..157
                     /gene="LOC139904035"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    order(125..127,137..139,152..154,251..253,263..265,
                     275..277,374..376,386..388,398..400)
                     /gene="LOC139904035"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293788"
     misc_feature    176..286
                     /gene="LOC139904035"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    287..406
                     /gene="LOC139904035"
                     /note="Armadillo/beta-catenin-like repeat; Region: Arm;
                     pfam00514"
                     /db_xref="CDD:425727"
     misc_feature    299..403
                     /gene="LOC139904035"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
ORIGIN      
        1 agagtagatt atgtttacca atagtcagcg acaagaagaa cgtaccggaa aatatggcac
       61 tcctagaata cagtatcttc aggaacttgt agctcagttt caaaatgctt ctactgaaga
      121 ggtgaaggag aaaattgctg ctaatttagc aaattttgct tatgatccct acaattatac
      181 atttctgcgc cagctcaacg ttttggagct tttcctcgac tgcataactg aacccaacga
      241 gaaacttata gagtttgggg caggagggat ctgcaactca tgtgttgatc ctgcaaatgc
      301 tgcggtgata atcaaatgtg atgggatacc tctgcttata caatgcttat caagtcctgt
      361 taaaaatacg gttaattatg caattggggc tctttactat ctctgtaatg catctacaaa
      421 ggaagcaatc ttgagaccgg aagtggtgga tatcatcaaa agatatgcag ctgctggtgc
      481 tgttagtgtt agttttagca atcttgcgca gtcattttta gataaacata tcccagaaaa
      541 ctaaattatt atgtccagta acagaattct gtaaaatgtg gttatgttta tattgttagt
      601 tgatttgcag ttagacgact tg
//
LOCUS       XM_071885971            2374 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904036), mRNA.
ACCESSION   XM_071885971
VERSION     XM_071885971.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2374
                     /gene="LOC139904036"
                     /note="uncharacterized LOC139904036; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904036"
     CDS             75..2336
                     /gene="LOC139904036"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742072.1"
                     /db_xref="GeneID:139904036"
                     /translation="MSKSNNLKPINSSQSNFISSNFIDDDDDFQNPTQFLSLTQRKPS
                     SSQLIKPSNSANNRPSKKPKKRHLYPGKENLETLTDSGLGPDSDFSLESIEPTVLCTN
                     RLDVSEAFSVASNEKKIKLKEGFGSLLNSIESRLLLRSKGDCSLGVCENACEKFDENG
                     YGGFKDIQETGTTQLDVLLDLCCSDEGEGIGVGEDEDEDDVDLDLDVDDSGFISCPIC
                     GLDISKMSDELRQVHTNECIDKEQGCDQVNIPDNDYVLECPGDVLDNPPSGAHGQVLD
                     DPSCQVPKQTNHVSPISVWLQNLGLSRYEEVFVREEIDYDSLKWLTDEDLCKIGITAL
                     GPRKKIVHALNELRTGSAEEVKLPDIVAHKETKITPNKLITDFFPGFTGKVKNSSSIG
                     PQVGKTNSNDGKKRTAGKMNFLNRKLRDIPSWCSITGTPFRVDAFKYLRRDCFHWFLT
                     HFHADHYGGLTKSFCHGKIYCSLITAKLVNLKIGIPWVNIEILPLNQKVNIDGVGVTC
                     FDANHCPGAIIILFEPPNGKAILHTGDFRFSDDMARISGLQTRVHTLILDTTYCNPQY
                     DFPKQEAVIQYVLEAIQAEAFNPKTLFLIGSYTIGKERLFMEVARVLRKKIYVNAAKM
                     RVLECLGMPKEDMQWLTLDERESHIHVVPMWTLASFKRLKHVSNTYMGRYSLIVAFSP
                     TGWSFGKGKKSSPGKRWQQGTIIRYEVPYSEHSSFTELKDFVKFITPNNIIPSVNNHS
                     QESASKMINLLSS"
     misc_feature    927..1118
                     /gene="LOC139904036"
                     /note="SAM domain (Sterile alpha motif); Region: SAM_1;
                     pfam00536"
                     /db_xref="CDD:425739"
     misc_feature    1308..1766
                     /gene="LOC139904036"
                     /note="SNM1A, artemis/SNM1C, yeast Pso2p, and related
                     proteins; MBL-fold metallo-hydrolase domain; Region:
                     SNM1A-1C-like_MBL-fold; cd16273"
                     /db_xref="CDD:293831"
     misc_feature    order(1425..1427,1431..1433,1437..1442,1611..1616,
                     1677..1679,1746..1748)
                     /gene="LOC139904036"
                     /note="putative active site [active]"
                     /db_xref="CDD:293831"
     misc_feature    1977..2294
                     /gene="LOC139904036"
                     /note="DNA repair metallo-beta-lactamase; Region: DRMBL;
                     pfam07522"
                     /db_xref="CDD:429512"
ORIGIN      
        1 tcaaataact caaatcgtct ttccaacagg ataataaagt cgcattcttt tcgaatcgat
       61 caaactaggt caaaatgtca aaatcaaaca acctgaaacc catcaattct tcacaatcca
      121 atttcatttc ttcaaatttc attgacgatg atgatgattt ccaaaaccca actcaattct
      181 tatcactcac ccaaagaaaa cctagctcat cacagctaat taaaccctca aattctgcta
      241 acaatcgacc atcaaaaaaa cctaaaaaac gtcaccttta tcctggtaaa gagaatcttg
      301 aaaccctaac tgattcgggc ctgggtcctg attcggattt ctctttagaa tcgattgaac
      361 ctactgtact ctgcaccaac agattagatg ttagtgaagc cttttcggtt gcgagtaacg
      421 agaaaaagat taaattgaaa gaggggtttg gtagtttatt gaattcgatc gagtctaggt
      481 tgttgttgag gtctaagggg gattgtagtt taggtgtttg tgaaaatgct tgtgagaaat
      541 ttgatgaaaa tggatatggg ggatttaagg atattcagga gacgggtacc acacaacttg
      601 atgtgttgtt ggatttatgc tgttcagatg aaggagaagg gattggagtt ggtgaagatg
      661 aagatgaaga tgatgtcgat ttggatttgg atgtggatga tagtggtttt attagttgtc
      721 caatttgtgg tcttgatatt tctaaaatga gtgatgagct gagacaagtt catacgaatg
      781 agtgtatcga taaagaacag ggttgcgatc aagtaaacat tcctgataac gattatgttt
      841 tggaatgtcc tggagatgta cttgacaatc ccccttctgg agctcatggg caagttctcg
      901 atgacccctc atgtcaagtt cctaagcaaa cgaatcatgt atctcctatt tctgtatggc
      961 ttcaaaatct tggcttatca cgctatgaag aagttttcgt ccgtgaagaa attgattatg
     1021 acagtctgaa gtggctcaca gacgaggatc tatgtaaaat aggtattact gctcttgggc
     1081 ccagaaagaa aattgttcat gctcttaatg aactgagaac aggatcggct gaagaagtta
     1141 agctacctga tatagttgca cacaaggaaa ctaaaatcac cccaaataag ttgattaccg
     1201 atttcttccc tggttttact gggaaagtga aaaatagttc tagtattggg ccacaggttg
     1261 gtaaaactaa ttcaaatgat ggcaagaaac gtaccgcggg taaaatgaac tttttaaata
     1321 gaaagttgcg agatataccc tcatggtgtt caataactgg aacaccattt cgtgtggacg
     1381 catttaaata tttgagaagg gattgcttcc attggttcct tactcacttt catgcagatc
     1441 attacggggg tcttacaaag tctttctgtc atgggaaaat ttactgctcc ttaattactg
     1501 caaaacttgt aaatctcaaa atcggtatcc cgtgggtaaa cattgaaata ttacctctaa
     1561 atcaaaaagt aaacattgat ggagttggtg ttacgtgctt cgatgctaat cattgtccag
     1621 gtgccatcat aattctgttt gaaccgccaa atggtaaggc tattttacac actggagact
     1681 ttcgttttag tgatgatatg gcaaggatct ctggtttgca gacacgtgtg cacactttaa
     1741 tcttagatac aacctattgt aaccctcagt atgactttcc gaagcaagag gctgtaatcc
     1801 agtacgttct tgaggccatt caagcggaag cttttaaccc aaaaactctg tttctgattg
     1861 gcagctatac aatcggaaaa gaaaggttgt tcatggaggt tgctcgtgtt cttcgtaaga
     1921 aaatttatgt taatgcagca aaaatgcgag ttttagaatg tttaggaatg cctaaagaag
     1981 atatgcaatg gctaacgttg gatgaaaggg agagccacat tcacgttgtg cctatgtgga
     2041 cactcgctag ctttaaaaga ctcaaacatg tttctaacac atatatgggt cgatatagtc
     2101 ttatagttgc tttctctcca actggttggt cattcggtaa aggaaagaaa tcatccccag
     2161 gaaagaggtg gcagcagggt actattataa ggtatgaggt tccatatagc gagcatagca
     2221 gctttacaga actcaaagac tttgtgaaat ttattactcc aaataacata attccgagcg
     2281 taaataatca tagccaagaa tctgcaagca agatgatcaa tctcttatcg tcttaattca
     2341 ttacaacgct catactttta attgacatat acaa
//
LOCUS       XR_011778630             795 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904037), transcript variant X1, ncRNA.
ACCESSION   XR_011778630
VERSION     XR_011778630.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139904037"
                     /note="uncharacterized LOC139904037; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904037"
     ncRNA           1..795
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904037"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904037"
ORIGIN      
        1 ctgatgtaat tactattact cctactatat gtaaaacaac aaacgatcaa gtaacacata
       61 tccttctcaa cttccctgct gcagacctga atagctaaat attagatcgg tgaatgggaa
      121 gctatcttgt ggtggagtgt tacctgcagc ttttataata tggtaacaaa gttatgttag
      181 ttccttccat accattgggc aagcagacga gacgaactgg gttgagttgt tactgatgta
      241 ctgaagaaaa tgcgaacaga ttcaccgcta tgagctgcaa ctcctggtga tcaaggcatt
      301 aagacaccta tagcagcttg atcttcagct taaggtttgt ataaggaaat atataggctc
      361 atcttgtggg aaaatgccat ctagacacag tttaaatacc taccatatta aaagccacaa
      421 ttgacatttt agcaaaactt taaatgaata agtagaacac agaaaagtag taatcaaatg
      481 ggtagaagtg atgttatagg aaggaaatgt tacagtgata tgaaatacaa aatatggcgg
      541 gacttgctga aaagtaatta gctgtgcaag tggggagcag gccatggtct gaacactatt
      601 attttattta tctaagaact tttatcgtta attgcacgag tacttttata acattattga
      661 attgaagtga accatattta tcttctattc gagttaacat tggtttctca ttatgataca
      721 attcttttac atgtctaact aatagtgtta ttttatttca aaatcccgcg aagtcgcggg
      781 ttataaacta gttaa
//
LOCUS       XR_011778631             770 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904037), transcript variant X2, ncRNA.
ACCESSION   XR_011778631
VERSION     XR_011778631.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..770
                     /gene="LOC139904037"
                     /note="uncharacterized LOC139904037; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904037"
     ncRNA           1..770
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904037"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904037"
ORIGIN      
        1 gtcaactttg acattgaacc atatgagttg ctagacaaac ctgtgatatt catggccagt
       61 tcctgttggg caaaaaatta gagggtgaat gggaagctat cttgtggtgg agtgttacct
      121 gcagctttta taatatggta acaaagttat gttagttcct tccataccat tgggcaagca
      181 gacgagacga actgggttga gttgttactg atgtactgaa gaaaatgcga acagattcac
      241 cgctatgagc tgcaactcct ggtgatcaag gcattaagac acctatagca gcttgatctt
      301 cagcttaagg tttgtataag gaaatatata ggctcatctt gtgggaaaat gccatctaga
      361 cacagtttaa atacctacca tattaaaagc cacaattgac attttagcaa aactttaaat
      421 gaataagtag aacacagaaa agtagtaatc aaatgggtag aagtgatgtt ataggaagga
      481 aatgttacag tgatatgaaa tacaaaatat ggcgggactt gctgaaaagt aattagctgt
      541 gcaagtgggg agcaggccat ggtctgaaca ctattatttt atttatctaa gaacttttat
      601 cgttaattgc acgagtactt ttataacatt attgaattga agtgaaccat atttatcttc
      661 tattcgagtt aacattggtt tctcattatg atacaattct tttacatgtc taactaatag
      721 tgttatttta tttcaaaatc ccgcgaagtc gcgggttata aactagttaa
//
LOCUS       XM_071885972            1953 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-ketoacyl-CoA synthase 10
            (LOC139904038), mRNA.
ACCESSION   XM_071885972
VERSION     XM_071885972.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1953
                     /gene="LOC139904038"
                     /note="3-ketoacyl-CoA synthase 10; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139904038"
     CDS             112..1773
                     /gene="LOC139904038"
                     /codon_start=1
                     /product="3-ketoacyl-CoA synthase 10"
                     /protein_id="XP_071742073.1"
                     /db_xref="GeneID:139904038"
                     /translation="MAPNGEQDLLSTEIVNRGIESSGPDAGSMTFSVRVRRRLPDFVQ
                     SVNLKYVKLGYHYLINHAIYLATVPVLVLVFGVEIGSLSREELWRKFWNSTAGYDLAT
                     VLAFFAVFVFTLSVYFMSRPRSIYLIDFACFKPTDDLKVTKEEFIDLARKSGKFDEAS
                     LEFQKKILQSSGIGDETYVPRAIMSTENITTMKEGRAEASMVIFGALDELFKKTRVRP
                     KDVGVLVVNCSIFNPTPSLSAMVINHYKMRGNILSFNLGGMGCSAGIIAIDLARDMLQ
                     ANPNNVAVVVSTEMVGYNWYPGKDRSMLIPNCYIRMGASAVLLSNRGRDYRRAKYRLE
                     HIVRTHKGADDRYFRSVYQEEDEQRFKGLKISKDLVEIGGEALKTNITTLGPLVLPLS
                     EQILFFATLVKRYFSNNKEKSVPSSGAITKSSQKATPSASGNKPYIPDYKLAFEHFCV
                     QAASKTVINELQRNLGLSDANVEPSRATLHRFGNTSSSSIWYELAYLEAKGRIKRGDR
                     VWQLSFGSGFKCNSAVWKSVRSIKKPTSNNPWLDCLDRYPFEALS"
     misc_feature    220..1761
                     /gene="LOC139904038"
                     /note="3-ketoacyl-CoA synthase; Region: PLN02192"
                     /db_xref="CDD:215123"
ORIGIN      
        1 ttacttcgtt gtccttgatc atttactcgc cccactcctc cataaattca caccttcctt
       61 cttcacattc atacatcatc ttcaatcttt tttttttttt cgatctcaat catggctcca
      121 aatggtgaac aagatctcct gtcaacggaa atcgtcaaca ggggaattga gtcgtcaggt
      181 cctgacgccg ggtccatgac tttctcagtc agggtccggc gtcggttacc tgactttgtt
      241 cagtccgtga acttaaaata tgtgaagctt ggttatcatt acttgatcaa ccacgcaatt
      301 tatcttgcaa ccgtgccggt gttggttctc gtgttcggtg tcgagattgg gagcttgagc
      361 cgtgaggagt tgtggaggaa gttttggaat agtactgctg gctatgattt ggcaactgtt
      421 ttggcatttt ttgcggtttt tgtgtttact ctctcggttt acttcatgtc cagacccaga
      481 tctatttatc taatcgattt cgcttgtttc aaaccaaccg atgatttgaa ggtaactaag
      541 gaggaattta ttgatttagc tcgaaaatct ggcaaattcg acgaagctag cctcgaattc
      601 cagaagaaaa tacttcaatc atccggaatc ggtgacgaaa cctacgtccc aagagcaata
      661 atgtcaaccg aaaacatcac aacaatgaaa gaagggagag cagaggcatc aatggtgata
      721 ttcggagccc tggacgaact tttcaagaaa actcgagtcc gcccaaagga tgttggtgta
      781 ctagtcgtaa actgcagtat ctttaacccg accccatcgc tatcagccat ggtcattaat
      841 cattacaaaa tgaggggaaa catattgagt ttcaacttag gtgggatggg atgtagtgct
      901 ggtattatag cgatcgattt ggctcgtgac atgcttcagg ctaacccgaa caatgtggcc
      961 gttgtggtta gtaccgagat ggttgggtat aactggtacc ctggtaaaga tcggtctatg
     1021 ttgataccga attgttatat tagaatgggt gcatcagctg tgttgctttc gaaccgtggt
     1081 cgtgattatc gtcgagccaa gtataggctc gaacatattg ttcgcacaca taagggtgct
     1141 gatgatcgat acttcaggag tgtctatcaa gaggaagacg aacaacgatt caagggtttg
     1201 aaaataagca aagatcttgt cgagattgga ggggaagcac tcaagacaaa cataacgact
     1261 ttgggtccat tagtgttgcc attatccgag caaatattgt tcttcgccac attagtgaaa
     1321 aggtacttct ctaataataa agaaaaaagt gtcccttcgt ctggagctat cactaagagt
     1381 tcacagaaag cgacaccttc tgcatctgga aacaagccct atattcctga ctacaagctc
     1441 gcatttgagc atttttgtgt tcaagcggct agtaaaaccg tgatcaatga gctccaacgc
     1501 aaccttggat taagtgatgc aaatgtggag ccgtctagag ccactcttca ccgctttggg
     1561 aacacctcta gtagtagcat ttggtatgag ttggcatacc ttgaggcgaa aggacggatc
     1621 aaacggggtg accgggtatg gcaattgtca tttgggtcgg gttttaaatg caatagtgcc
     1681 gtgtggaaat ctgttcggag cataaagaaa cctacaagca acaatccttg gcttgattgc
     1741 cttgacaggt acccttttga ggcactttct tagagtagcc agattcaatc ctcaaagttt
     1801 acactagtta cacttgggta ccttttattt ataaataaga ggctaaaagt ttcttcaaac
     1861 ttctcaattt cctatgttgt attcgagttt tactatttat tgttgtatta acttctgttt
     1921 ggaattcgtt taatgtcatt cactttacaa gga
//
LOCUS       XR_011778632            1162 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904039), ncRNA.
ACCESSION   XR_011778632
VERSION     XR_011778632.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1162
                     /gene="LOC139904039"
                     /note="uncharacterized LOC139904039; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904039"
     ncRNA           1..1162
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904039"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904039"
ORIGIN      
        1 tgaagatgta aggtcgtttt attaacagaa aagcttaaag ctacatttaa cgctcgccta
       61 tttatctaca ccacagacaa aaacgcatat tctccacctt ccgatctttc tcgcgattga
      121 agatgtaagg acacagatta gggttctaag ctattgacct caacctcttc ttcatactct
      181 ccttcattct atcttatttg tggatggcac aaaaaatttg aagcaggcat atggtacaaa
      241 ttagggtttc ataccgttct tattcggatc cgtaattatg cgattttggc cctctgaagc
      301 gattgatgaa cctctgctga taacagttct ggatattcta ttcaacaacc atgaccctac
      361 taaaccttag gggaagaaga acaaaagatt aaatcacacc ttagatacca aagagaagaa
      421 gcaaatattc aaacttgggt ggaccttcaa aatgctaaag cagaagctca atcaagaaag
      481 ctttaggttt tcaggtgata aaactgaaat tgtccctcaa tgttctagat gctctaaata
      541 tgtcattcca acatattgat ggttcttaat gatacaggtt gattgtggtt taatcaaaca
      601 cttccgttct tgttgttatc aagtgctctc acatataaaa aaataggtat gcagtggcaa
      661 tggtgaaaag tgagaggcta cctgcaaata gaattacgcc aactactaaa gctacaaata
      721 tggtgctcct gctacttcag atgaggtttg tatacgaggt ttatatatgt tcttaacttc
      781 tcttcttcat ttatttatcg aacactctga atttcgtaaa atttgtcaaa atgaagcagt
      841 tgaaatcgtc caaactgcat attatatgat actcactgat gtgtaaaatc gcgtctataa
      901 tttatataat gggaaatacc ggttaaaagg attactacac actaacgggc agtgtacccg
      961 atcgtgcaat agtataaagt tggtaaatcc aagatcgttc cacggacagt tcacacataa
     1021 aaaattaaga ttgcaactaa tgaaataaac taagttaatc tatggaaatt taaagtacga
     1081 gataatttgt ttgtggctat ttaacgatta gccaaatcaa ggatagatca aaagtaaaag
     1141 acaatatttt tgggttttta ag
//
LOCUS       XR_011778633             448 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904040), ncRNA.
ACCESSION   XR_011778633
VERSION     XR_011778633.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..448
                     /gene="LOC139904040"
                     /note="uncharacterized LOC139904040; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904040"
     ncRNA           1..448
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904040"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904040"
ORIGIN      
        1 ctttccttct ttttcttaac taaactaaaa ccaaaattca tcaaattttt ctaaagtaaa
       61 tcttcatctt ttatatggat attagaaatc acctccagcc aaatttagca cgattttacg
      121 ttgtgaacaa cacttaaccg ggtttgctct tctcagctcc ttctctgatt tggccaccgc
      181 catcaccacc aaactcctct aacaaactgg ctctctatca accaaacgcc gcttctaagg
      241 ttttcgctac gtaggttgtg tttttacttt atgggtggcg gtaggtgtga cttttaccgg
      301 taggtgttgc cggtggtggt tgatgacggg gggttttcat tttttttttt gtatttaaat
      361 tagctatcaa gtgttgtact ctatgctgtg gaagttgtac caactttgag aagtaatagc
      421 agtgtattgg tattgttatc tttgttta
//
LOCUS       XR_011778634             650 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904041), ncRNA.
ACCESSION   XR_011778634
VERSION     XR_011778634.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..650
                     /gene="LOC139904041"
                     /note="uncharacterized LOC139904041; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904041"
     ncRNA           1..650
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904041"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904041"
ORIGIN      
        1 tgttatggac gacacaatgt atcttctcaa tgcaattcaa atttaagatg ctctagggaa
       61 tatcatatcg tcctctgaat tgttttaatt gcaatgatat cttttacatt ttcagctatt
      121 tccaagatat ctcattcatc ctttggctaa atgggttata ttaaatctca tcttcatgct
      181 ctaaacccta attttttaac aagatggtgt ctttcttact cttcaatttc tatgagtagc
      241 caaacacagt tctcttactc ttcaatgtct atgtttttct tctcaaaatt tcatgaaaat
      301 ttgaaagtta gggtccacag tctctggaag atggcttacg aactgcaaat gattgtgatg
      361 gatgaaaagg tgtttgatga aatgctcgag agaaatggaa caacgaaagt gacggcggtg
      421 gtgtatgttt gaaggaaagt gccggtggtg gtggtggtct atgtttgaag gtttgtcaag
      481 ttttttgttt ttcatttttt cctacaaatc tatagtttat gtcttcattt atatttgggt
      541 cataagccta tcatttgttt tgtttgttat tttaagtaat aaaaagaatg tttgtatttt
      601 gaactaatat gttgatgtat gctatatgtt ttatgtgttt gattacgcta
//
LOCUS       XM_071885973            1739 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethanolamine-phosphate
            cytidylyltransferase-like (LOC139904042), transcript variant X1,
            mRNA.
ACCESSION   XM_071885973
VERSION     XM_071885973.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1739
                     /gene="LOC139904042"
                     /note="ethanolamine-phosphate cytidylyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 13 Proteins"
                     /db_xref="GeneID:139904042"
     CDS             210..1478
                     /gene="LOC139904042"
                     /codon_start=1
                     /product="ethanolamine-phosphate
                     cytidylyltransferase-like"
                     /protein_id="XP_071742074.1"
                     /db_xref="GeneID:139904042"
                     /translation="MDYPATYSIWEGVYYHPHLFGGIMLTATLLCLSTSYFSGVAGFP
                     TLPYMLPYLGNLQKKEVSKKRIRVYMDGCFDLMHYGHANALRQAKALGDELVVGIVSD
                     EEIIKNKGPPVLSMDERLALVSGLKWVDEVIADAPYAITEDFMNTLFDEHKIDYIIHG
                     DDPCLLPDGSDAYALAKNVGRYKQIKRTEGVSSTDIVGRILASMDEKEVNEVNGDRHG
                     MRRSLESHLTSKHASNFLPTSRRIVQFSNGKGPGPNARVVYIDGAFDLFHAGHVEILK
                     SARQLGDFLLVGIYTDQTVSQQRGAHFPLMHLHERSLSVLACRYVDEVIIGAPWEISK
                     DMITTFNISIVVHGTVSESNSTLKAMVDPYGVPKSMGIFRTLESPKNITTTSVAQRIK
                     ANHEIYEKRNAKKEASEKKFYEERKYISGD"
     misc_feature    231..1475
                     /gene="LOC139904042"
                     /note="ethanolamine-phosphate cytidylyltransferase;
                     Region: PLN02406"
                     /db_xref="CDD:215227"
ORIGIN      
        1 cgtcatcctt tcgtcatatt tcttcttcat tttattttta ttctttatta ttacgaagta
       61 atcacattca accaaaaatt tctattctca ctttgtaatt aaaacgaaca cgtcctagtt
      121 ccccccttta cgataccaaa aattactaat ttcaactcac gcacgaaagg gctctactgg
      181 cccttgagaa gtgaagtttt tggagaaaaa tggattaccc cgctacgtat tcgatctggg
      241 aaggtgtgta ctaccaccca catctatttg gcggtatcat gctaacggct acgttgcttt
      301 gtctttcaac tagttatttt agtggtgttg ctggttttcc tactttgcca tacatgttac
      361 cttacttggg aaatctacag aagaaagaag ttagcaagaa acgtattcgt gtatacatgg
      421 atgggtgttt tgatcttatg cattatgggc atgcaaacgc tttgagacaa gctaaggctt
      481 taggtgatga attggttgtt ggaatcgtta gcgatgagga aatcataaag aacaagggtc
      541 ctcctgtttt atctatggat gagaggctag cactcgtaag cggattgaag tgggtggatg
      601 aagtgattgc tgatgcacct tatgccataa ctgaagactt catgaacact ctctttgatg
      661 aacataagat tgattacatt attcatggtg atgatccttg cttgcttcct gatggaagtg
      721 atgcatatgc tttggctaag aatgttggtc gttataagca aatcaagcgc acagaaggtg
      781 tctcaagtac agatattgta ggaagaatac ttgcgtctat ggatgagaaa gaagttaatg
      841 aagtcaatgg agaccgtcat ggaatgagaa gaagtttgga aagtcattta acatctaaac
      901 atgcttctaa cttcctgcct acatcaagaa gaattgtgca attttctaat ggcaagggcc
      961 ccggaccaaa tgctcgtgtt gtgtacattg atggagcgtt tgatctgttt cacgcaggac
     1021 atgttgagat tctgaagagt gcacgacagc ttggagattt tctgctagtg ggcatataca
     1081 ctgatcaaac tgttagccaa caaagagggg ctcatttccc actaatgcat ctgcacgaac
     1141 gcagtcttag cgttttggct tgtcgatatg tagatgaagt catcatcggt gctccttggg
     1201 aaatctcaaa agacatgatt acaactttca acatctccat agttgtgcac ggaactgttt
     1261 cagagagcaa ctctactctc aaggccatgg tggatcctta cggtgttccg aaaagcatgg
     1321 gaatattcag gacactagaa agcccgaaaa acatcaccac cacttctgtg gctcaaagaa
     1381 taaaagccaa tcatgagata tatgagaagc gaaatgcaaa gaaggaggct agtgagaaga
     1441 agttttatga agagaggaaa tatatttcag gggattaatc aattcgttta tcggttttgt
     1501 ttggcatata tattttctga agatattatt attctggtat acctttatgt gttaggaaga
     1561 acatagattt atagtcaaaa agtctctggt aaagtcttta gctattgcaa tatctttcta
     1621 tatatagaga ttctagatat taagatacta accccttggg ttggatgtat caacctgaat
     1681 gttttgtgaa catttaagca cataaattaa tcaagttttc gtctttctat ttttgtaaa
//
LOCUS       XM_071885974            1665 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethanolamine-phosphate
            cytidylyltransferase-like (LOC139904042), transcript variant X2,
            mRNA.
ACCESSION   XM_071885974
VERSION     XM_071885974.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1665
                     /gene="LOC139904042"
                     /note="ethanolamine-phosphate cytidylyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 13 Proteins"
                     /db_xref="GeneID:139904042"
     CDS             135..1403
                     /gene="LOC139904042"
                     /codon_start=1
                     /product="ethanolamine-phosphate
                     cytidylyltransferase-like"
                     /protein_id="XP_071742075.1"
                     /db_xref="GeneID:139904042"
                     /translation="MDYPATYSIWEGVYYHPHLFGGIMLTATLLCLSTSYFSGVAGFP
                     TLPYMLPYLGNLQKKEVSKKRIRVYMDGCFDLMHYGHANALRQAKALGDELVVGIVSD
                     EEIIKNKGPPVLSMDERLALVSGLKWVDEVIADAPYAITEDFMNTLFDEHKIDYIIHG
                     DDPCLLPDGSDAYALAKNVGRYKQIKRTEGVSSTDIVGRILASMDEKEVNEVNGDRHG
                     MRRSLESHLTSKHASNFLPTSRRIVQFSNGKGPGPNARVVYIDGAFDLFHAGHVEILK
                     SARQLGDFLLVGIYTDQTVSQQRGAHFPLMHLHERSLSVLACRYVDEVIIGAPWEISK
                     DMITTFNISIVVHGTVSESNSTLKAMVDPYGVPKSMGIFRTLESPKNITTTSVAQRIK
                     ANHEIYEKRNAKKEASEKKFYEERKYISGD"
     misc_feature    156..1400
                     /gene="LOC139904042"
                     /note="ethanolamine-phosphate cytidylyltransferase;
                     Region: PLN02406"
                     /db_xref="CDD:215227"
ORIGIN      
        1 atcaaattaa ttttaatttc taaatataaa tatctgcaac ctggaatatg aggccagcac
       61 aagaccgacc tcgtgtctga actcgctgcc ccatggctct actggccctt gagaagtgaa
      121 gtttttggag aaaaatggat taccccgcta cgtattcgat ctgggaaggt gtgtactacc
      181 acccacatct atttggcggt atcatgctaa cggctacgtt gctttgtctt tcaactagtt
      241 attttagtgg tgttgctggt tttcctactt tgccatacat gttaccttac ttgggaaatc
      301 tacagaagaa agaagttagc aagaaacgta ttcgtgtata catggatggg tgttttgatc
      361 ttatgcatta tgggcatgca aacgctttga gacaagctaa ggctttaggt gatgaattgg
      421 ttgttggaat cgttagcgat gaggaaatca taaagaacaa gggtcctcct gttttatcta
      481 tggatgagag gctagcactc gtaagcggat tgaagtgggt ggatgaagtg attgctgatg
      541 caccttatgc cataactgaa gacttcatga acactctctt tgatgaacat aagattgatt
      601 acattattca tggtgatgat ccttgcttgc ttcctgatgg aagtgatgca tatgctttgg
      661 ctaagaatgt tggtcgttat aagcaaatca agcgcacaga aggtgtctca agtacagata
      721 ttgtaggaag aatacttgcg tctatggatg agaaagaagt taatgaagtc aatggagacc
      781 gtcatggaat gagaagaagt ttggaaagtc atttaacatc taaacatgct tctaacttcc
      841 tgcctacatc aagaagaatt gtgcaatttt ctaatggcaa gggccccgga ccaaatgctc
      901 gtgttgtgta cattgatgga gcgtttgatc tgtttcacgc aggacatgtt gagattctga
      961 agagtgcacg acagcttgga gattttctgc tagtgggcat atacactgat caaactgtta
     1021 gccaacaaag aggggctcat ttcccactaa tgcatctgca cgaacgcagt cttagcgttt
     1081 tggcttgtcg atatgtagat gaagtcatca tcggtgctcc ttgggaaatc tcaaaagaca
     1141 tgattacaac tttcaacatc tccatagttg tgcacggaac tgtttcagag agcaactcta
     1201 ctctcaaggc catggtggat ccttacggtg ttccgaaaag catgggaata ttcaggacac
     1261 tagaaagccc gaaaaacatc accaccactt ctgtggctca aagaataaaa gccaatcatg
     1321 agatatatga gaagcgaaat gcaaagaagg aggctagtga gaagaagttt tatgaagaga
     1381 ggaaatatat ttcaggggat taatcaattc gtttatcggt tttgtttggc atatatattt
     1441 tctgaagata ttattattct ggtatacctt tatgtgttag gaagaacata gatttatagt
     1501 caaaaagtct ctggtaaagt ctttagctat tgcaatatct ttctatatat agagattcta
     1561 gatattaaga tactaacccc ttgggttgga tgtatcaacc tgaatgtttt gtgaacattt
     1621 aagcacataa attaatcaag ttttcgtctt tctatttttg taaaa
//
LOCUS       XR_011778635             370 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904043), ncRNA.
ACCESSION   XR_011778635
VERSION     XR_011778635.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..370
                     /gene="LOC139904043"
                     /note="uncharacterized LOC139904043; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904043"
     ncRNA           1..370
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904043"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904043"
ORIGIN      
        1 tgttttaaca tttgtttact tgataatcaa atactaagtt agtgttgtag caaatcatta
       61 tttgtatcct actaaattcg gtgtatttta caggtaaaag tgatgaactt tctgtttgag
      121 acaaatgaag cgtagaaagc agtatgttga tagcatcgag aacaaaaaca tagtggatga
      181 caaatcttgt gttcttcttg tgtgtgagat tgtgcagggc atgttatgtt aataaagtat
      241 cagcttgtga gtatatgggt cgaacgtgtt ggtgcaaaac atttaaaggc atatgtttgc
      301 tttggattaa ggaatgaact caaaaaggtc ttaataagct tcggatcatt gcatttggaa
      361 aggattgaaa
//
LOCUS       XM_071885975            1377 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides spermidine hydroxycinnamoyl
            transferase-like (LOC139904044), mRNA.
ACCESSION   XM_071885975
VERSION     XM_071885975.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1377
                     /gene="LOC139904044"
                     /note="spermidine hydroxycinnamoyl transferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139904044"
     CDS             1..1377
                     /gene="LOC139904044"
                     /codon_start=1
                     /product="spermidine hydroxycinnamoyl transferase-like"
                     /protein_id="XP_071742076.1"
                     /db_xref="GeneID:139904044"
                     /translation="MKVTKNSSCMVKPAERTWSGRLSLSELDQTGMTTHVPIVYFYTQ
                     PSVNWNNVIQKLKTSLTTTLVNFYPLAGRLVSISGGRLELICNGAGVQFTEANTDVRL
                     ADLDNFSDHPIIDQLIPSFDYRRTPIEEMPLLLLQVTRFVCGGWSLGFFISHIAVDGQ
                     SSLHFITEWTKVCRGEPLGPPPYLDRKVLRAGAPAMMTTRFNNNVEQHYAQFSPPPTL
                     IGQSNNENERRKETAITMLKLTDTLVTKLRNKANENRKNKADRGFTRYEAVTAHIWQT
                     ACKIRNHEPEQKTSVGLCIDLRHRMNPPLPENYFGNAIVDVITKGTSGELVSETLGYV
                     CSKIRDTIEKVDDQFVNSVIDFLKNQEDISKFQDLQLVNDCEGAFYGNPNLGVISWLT
                     LSMYGFDFGWGKEIFTGPGTIDAEDGDFLILPSRREEDGSLIVASCLQVKHMEDFKRV
                     FFQSIEED"
     misc_feature    1..1365
                     /gene="LOC139904044"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     Region: PLN02481; cl23789"
                     /db_xref="CDD:355048"
ORIGIN      
        1 atgaaagtaa cgaaaaactc ttcttgtatg gtcaagccag ccgagcgaac atggtctggt
       61 aggctctcac tatctgaact agaccaaacc ggtatgacca cacatgtccc gatcgtctac
      121 ttctacaccc aaccctctgt caattggaac aatgtcattc aaaaactaaa aacttctctt
      181 accaccacac ttgtcaattt ctacccttta gccggccgcc tagtgtccat ttctggcggt
      241 cgtctagaac tcatctgcaa tggcgctggc gtacaattta ctgaagccaa cactgacgtt
      301 agactagctg acctagataa cttctcagat catccgatca ttgaccaact cattccctca
      361 ttcgattatc gacgtacacc aattgaagaa atgccattgt tgcttttgca agtaacaaga
      421 tttgtttgtg gagggtggtc tttagggttt tttatatcac atattgccgt tgatggccaa
      481 agttcgcttc attttattac agagtggaca aaagtttgtc gcggtgaacc attgggccca
      541 ccaccctatc ttgacagaaa agttctgcgc gctggtgcac ctgcgatgat gacaactcgt
      601 tttaataaca acgtcgaaca acattacgca cagtttagtc ctccacccac ccttataggt
      661 caatcaaaca acgaaaatga acgtagaaaa gaaaccgcaa taacaatgtt gaaattaaca
      721 gacactctag tcacaaaact acgaaacaaa gctaacgaaa acagaaaaaa caaagcggac
      781 cgtggtttta cacgttatga agctgtaacc gcacacatat ggcaaacagc atgcaagata
      841 cgtaatcatg aaccagagca aaaaacttca gttgggcttt gtatcgattt aagacatcga
      901 atgaaccctc cgttacctga aaactacttt ggaaacgcca tagttgatgt gatcactaaa
      961 ggaacatccg gtgagctagt ttcagaaaca ttagggtacg tttgtagtaa gataagagac
     1021 acaatcgaaa aggtggacga ccagtttgta aactcggtga ttgatttctt gaagaatcaa
     1081 gaagatatat caaagtttca agatttgcag ttggttaatg actgtgaagg agcgttttac
     1141 gggaacccga atcttggtgt gatcagttgg ttaacgttgt caatgtacgg ttttgatttt
     1201 ggatggggga aggagatttt tacaggtccg ggaactattg atgctgaaga tggcgatttc
     1261 ttgattcttc cgtcaagaag agaagaagat ggatcattga ttgtggcttc atgtttacag
     1321 gtgaaacaca tggaagattt taagcgtgtg ttctttcaaa gtattgaaga ggattga
//
LOCUS       XM_071885976            1387 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides omega-amidase,
            chloroplastic-like (LOC139904045), mRNA.
ACCESSION   XM_071885976
VERSION     XM_071885976.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1387
                     /gene="LOC139904045"
                     /note="omega-amidase, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139904045"
     CDS             40..1191
                     /gene="LOC139904045"
                     /codon_start=1
                     /product="omega-amidase, chloroplastic-like"
                     /protein_id="XP_071742077.1"
                     /db_xref="GeneID:139904045"
                     /translation="MRSIGTIAILSATSPVNFTTLRSSTVTRSSPVSSPSFACRQIPQ
                     HNFQIPVASNKINDRHSLFKVPSVRTITRASSSFMASSFSPENARVPPAIDLPVPSIS
                     KFKIGLCQLSVTADKERNIRHARQAIEDAAEKGAKLVLLPEIWNSPYANESFPVYAED
                     IDAGKDLSPSTTMLSEVARSLKITIVGGSIPERCGDKLYNTCCVFDTDGKLKAKHRKI
                     HLFDINIPGKITFEESKTLTAGETPTIVDTDVGRIGIGICYDIRFQELAMLYAARGAH
                     LLCYPGAFNMTTGPLHWELLQRARAVDNQLYVATCSPARDAGSGYVAWGHSTLVGPFG
                     EVLATTEHEEATIISEIDYSQLELRRTNLPLQKQRRGDLYSLLDVQRAE"
     misc_feature    352..1149
                     /gene="LOC139904045"
                     /note="Nit1, Nit 2, and related proteins, and the
                     Nit1-like domain of NitFhit (class 10 nitrilases); Region:
                     nit; cd07572"
                     /db_xref="CDD:143596"
     misc_feature    order(466..468,637..639,688..690,700..702,736..738,
                     811..816,820..825,886..888)
                     /gene="LOC139904045"
                     /note="putative active site [active]"
                     /db_xref="CDD:143596"
     misc_feature    order(466..468,688..690,811..813)
                     /gene="LOC139904045"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143596"
     misc_feature    order(691..696,754..762,814..816,823..837,841..846,
                     910..915,922..927,931..939,943..948,1036..1038,1126..1131,
                     1138..1143,1147..1149)
                     /gene="LOC139904045"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:143596"
     polyA_site      1387
                     /gene="LOC139904045"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atccaacgat tcaacacttc aatcgacggt tccaaagata tgagaagtat cggaacaatt
       61 gcaattttgt cagcaacatc gccggtgaat ttcactactc tccgatcatc caccgttact
      121 cgctcatctc ccgtctcatc tccgtcgttc gcttgccgtc aaattccaca acacaacttt
      181 caaattccgg tagcttctaa taaaattaac gatcgtcaca gtctattcaa agttccttct
      241 gtccgtacaa tcactcgtgc ttcatcatcg tttatggcgt cttcctttag tcctgagaac
      301 gctagggttc cacctgctat tgatttgcct gtcccttcta tctctaagtt caagatcgga
      361 ttatgtcaat tgtctgtgac agcggacaag gagaggaata ttcggcatgc tcgtcaagca
      421 attgaagacg cagccgaaaa gggcgccaag cttgttcttc tgcctgaaat atggaacagc
      481 ccttatgcta atgagagctt tcccgtgtat gctgaggaca ttgatgctgg gaaggattta
      541 tctccatcca caacaatgtt gtctgaagtt gcacgttctt taaagatcac aatagttggt
      601 gggtccatac cagaaagatg cggtgacaag ctgtacaata cttgttgcgt ttttgatact
      661 gatggaaagc tgaaagctaa acacagaaag atacaccttt ttgacatcaa tattcctgga
      721 aagattacat ttgaggaatc aaagactctg actgctggtg aaactcctac tattgtcgat
      781 acagatgttg ggcgtatagg tataggtatc tgctatgaca ttcgatttca ggagctggcc
      841 atgctatatg cagctagagg tgctcaccta ctttgttatc ctggggcctt caatatgact
      901 actggtccac tgcattggga attactacag agggcaaggg ctgtagataa tcagttatat
      961 gtagcaactt gctcacctgc tcgagatgct ggatctgggt atgtggcgtg gggccattcg
     1021 actctagttg gaccatttgg agaagtattg gctacaacag aacacgaaga ggcaaccatc
     1081 atatccgaaa ttgattactc gcaactcgaa ctaaggagga caaatctccc attacagaag
     1141 caacgacgtg gtgatcttta cagcttgctt gacgttcaaa gggcggagta gtagtgtaca
     1201 cctacatttt gattcaagta gcacggtgat caaaatgtcc gtggtgatct ttactgcaat
     1261 gttgacaatt tgatttagta gcatatgttt tcattccatg aacttgccga agaataagtc
     1321 cactgtaact tataacatcc atgttatatt gctggttatt aataaacgct tcccttattg
     1381 actaaaa
//
LOCUS       XM_071885977            2983 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At4g19191, mitochondrial-like
            (LOC139904046), transcript variant X1, mRNA.
ACCESSION   XM_071885977
VERSION     XM_071885977.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2983
                     /gene="LOC139904046"
                     /note="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904046"
     CDS             11..1963
                     /gene="LOC139904046"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like"
                     /protein_id="XP_071742078.1"
                     /db_xref="GeneID:139904046"
                     /translation="MIKAKISSISHQLSNISTVSQWNYTIRQAVNQAQYQTALLLFCQ
                     MMRNTLQPNHLTFPIIAKACGKLNNICYSKIIHTHIMKSPFNVDIYVQTATMDMYIKC
                     DRIDIAHKVFDRMPQRDIASWNAMLLGFAQLGLVDQVVALFKQMRVENIQPDSVTVIG
                     ILQLITSRVKVTLLTAIHSFGIRTGVDVDVSVSNTLVSCYAKVRDLESAEKVFHETEP
                     CFVTVVSWNSMIAGYAYFHKYMKALSFYRKMLYDGFRPDLSTILNLLSSINQHEALFH
                     GKLIHCHGVKTGCDSEISILNTLVSMYSKCDDLTAARLIFDDMMDTRTCVSWTAMIGG
                     YAEKGDLDVALTLFDSMEATGLKPDLVTILNLIAGCGEIGALETGRWVDNCAVFYGFR
                     SNIMVLNALIDMYAKCGSLNEAREIFYKMRETTVVSWTSMISGCALNGEFEESLTLFF
                     RMLDLGIKPNHITFLAAFQACNHGGFIEKGWEIYNLMMKIYKIIPGLDHYASMADLLA
                     RVGKIKEALNLIRNMPMKPDFGIWSSLLSACKVHRNMEIGQIAARHLFEMDPQAAAPY
                     VEMANIYASVDRWDGVIAVRKLMRKNQVKKFPGESVVQVNRKNYKFTVEDRCHPKGTV
                     IYEVLDGLGLQSKDELDLVSSHDVLP"
     misc_feature    74..1906
                     /gene="LOC139904046"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    176..259
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    296..364
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    374..457
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    473..661
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    677..760
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    893..976
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    989..1072
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1199..1279
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1292..1375
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1391..1483
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1499..1588
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tttctattct atgataaagg cgaaaatttc atcgatttca catcaattgt caaacatatc
       61 aacggttagc caatggaact acactatcag acaagccgta aaccaagctc aatatcaaac
      121 agccctttta ctgttttgcc aaatgatgcg aaacacctta caacccaacc atttaacctt
      181 cccaatcatc gcaaaagcat gtgggaaact gaataatata tgttactcga aaatcattca
      241 tacacacatc atgaaatccc cgtttaatgt ggatatatat gtgcagacag caacgatgga
      301 catgtatata aaatgtgacc gtatagatat cgcacacaag gtgtttgata gaatgcctca
      361 gagagacatt gcgtcttgga atgcaatgct tttaggattt gctcaattgg gtttagttga
      421 tcaagtggtg gcacttttta agcaaatgag agttgaaaat attcagcccg attcggtcac
      481 agtgatcggg atattgcagt tgattacaag tagggtcaaa gttacgcttt tgacggctat
      541 tcattctttt gggattcgaa ctggggttga tgttgacgtt tctgtttcca acacgttggt
      601 gtcttgttat gcaaaagtta gagacttaga gtcagcggag aaagtttttc atgagaccga
      661 accatgtttt gtaacggttg tttcgtggaa ttctatgata gcgggatatg cgtattttca
      721 taagtatatg aaggctctta gtttctatcg aaagatgctt tacgatggat ttaggcctga
      781 cttgagtact attcttaatt tgctttcttc gatcaaccaa catgaagcac tttttcacgg
      841 taaattgatc cattgtcatg gagttaagac gggttgcgat tcggaaatat ctatacttaa
      901 caccctagtt tcgatgtact caaagtgtga cgatcttact gctgcaagac ttatattcga
      961 cgacatgatg gatacaagaa cttgtgtttc gtggacggct atgattggtg ggtatgctga
     1021 gaaaggtgac ctagatgtgg ctttgacttt gtttgactct atggaagcca cgggtttaaa
     1081 acctgattta gttacgatac ttaatctaat tgctggttgt ggagaaatag gagcacttga
     1141 aacaggaaga tgggttgata actgtgctgt tttttacgga ttcaggagca atataatggt
     1201 cttaaatgct ttgatagaca tgtatgcaaa atgtggaagc ttaaatgaag ctcgtgagat
     1261 cttttataaa atgcgtgaaa caactgttgt ttcatggact tcaatgattt ccgggtgtgc
     1321 tttaaatgga gaatttgaag aatctttgac actttttttt cgtatgttgg atttaggaat
     1381 aaaaccaaac cacataacgt ttcttgctgc ttttcaagct tgtaatcatg gtggttttat
     1441 tgaaaaggga tgggagattt acaatcttat gatgaaaatt tataaaatca tcccgggatt
     1501 agaccattac gcttccatgg ctgatcttct tgcacgtgtt ggaaagataa aagaagcttt
     1561 gaatttgatt cgaaatatgc caatgaaacc tgattttggc atatggtcat cgttgcttag
     1621 tgcttgtaaa gttcatcgta atatggagat tggtcaaatt gcggctcgtc atctttttga
     1681 aatggaccca caagctgcag ctccttatgt agaaatggct aacatttatg cctcagtgga
     1741 tcgttgggat ggcgttattg ctgttagaaa attaatgaga aagaatcaag taaagaagtt
     1801 tcccggagaa agcgtagttc aagtaaatag gaagaattat aagtttacag ttgaagatcg
     1861 gtgtcatcct aaagggacag ttatatatga agtgttagac ggtttaggtt tacagtcaaa
     1921 agacgaattg gatttagtaa gttcacatga cgttttacca tgacactaga cttggtttac
     1981 aactacagct taagtacaag taacgaacta gagagaacta ttattgaaga aacacagaaa
     2041 gaaaatagtt taaccgatca agacaagtat tcaacctacg agcaataaaa cctttgatta
     2101 atgcttcttt cggaacaatt ccagtgcgtg ttgtactaca aagcttacta ttggggtgat
     2161 tggaggttta tgtgaagttg ctagctctga tgttcaagat aacatcaatg ctacttttcg
     2221 taaggatcta aacaacttca aggaaatagt tatcgacgta tgttcctctg aatcagaaga
     2281 tgaaaacgac tcatgtagtg ataaaatatt tcataaacaa ttggtgcttt atgatccttc
     2341 tgttaacact gaagacgtga ctgaaacctt ccgagatccc gtacagacgc tgtcttcagt
     2401 acattagcat gattgttgtg atggctttat caactttgta ttgctgtttg atgcgaaata
     2461 ccaatattct tgcagctagg ccaatgccct ttacctggtc tagagcagaa catttgcact
     2521 tgcaacttgg tatgccaggt tccttgatca gcttccttct atgtgcccgt cacccaagaa
     2581 ggcaactagt gcaccaggta aaaggttcaa tccatcatag aaggttcttt taacggatca
     2641 tcatatcacg tattcatgtt aatacagttt atttattagt acacgcaaac acaaacacac
     2701 actccaaacg tagtcttttg gaatactatg tcgtttgact ctcaaaaagt tagaatatgt
     2761 taggaaccaa aaatacatgt taaaagccgt ggtccaaaaa gtacattgac tcaaggaaag
     2821 ggccttgtaa ccacttaaga tggaccactc ttttaagaat tacgcgttat ctttgtgata
     2881 cgtgttaagc atgtattata atatatgtat atatatataa ttttattatt aaacgtgtgc
     2941 atccaaaatt gaaagtttat agtgtatgaa tcaagcaaac gga
//
LOCUS       XM_071885978            2894 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At4g19191, mitochondrial-like
            (LOC139904046), transcript variant X2, mRNA.
ACCESSION   XM_071885978
VERSION     XM_071885978.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2894
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2894
                     /gene="LOC139904046"
                     /note="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904046"
     CDS             11..1963
                     /gene="LOC139904046"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like"
                     /protein_id="XP_071742079.1"
                     /db_xref="GeneID:139904046"
                     /translation="MIKAKISSISHQLSNISTVSQWNYTIRQAVNQAQYQTALLLFCQ
                     MMRNTLQPNHLTFPIIAKACGKLNNICYSKIIHTHIMKSPFNVDIYVQTATMDMYIKC
                     DRIDIAHKVFDRMPQRDIASWNAMLLGFAQLGLVDQVVALFKQMRVENIQPDSVTVIG
                     ILQLITSRVKVTLLTAIHSFGIRTGVDVDVSVSNTLVSCYAKVRDLESAEKVFHETEP
                     CFVTVVSWNSMIAGYAYFHKYMKALSFYRKMLYDGFRPDLSTILNLLSSINQHEALFH
                     GKLIHCHGVKTGCDSEISILNTLVSMYSKCDDLTAARLIFDDMMDTRTCVSWTAMIGG
                     YAEKGDLDVALTLFDSMEATGLKPDLVTILNLIAGCGEIGALETGRWVDNCAVFYGFR
                     SNIMVLNALIDMYAKCGSLNEAREIFYKMRETTVVSWTSMISGCALNGEFEESLTLFF
                     RMLDLGIKPNHITFLAAFQACNHGGFIEKGWEIYNLMMKIYKIIPGLDHYASMADLLA
                     RVGKIKEALNLIRNMPMKPDFGIWSSLLSACKVHRNMEIGQIAARHLFEMDPQAAAPY
                     VEMANIYASVDRWDGVIAVRKLMRKNQVKKFPGESVVQVNRKNYKFTVEDRCHPKGTV
                     IYEVLDGLGLQSKDELDLVSSHDVLP"
     misc_feature    74..1906
                     /gene="LOC139904046"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    176..259
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    296..364
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    374..457
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    473..661
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    677..760
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    893..976
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    989..1072
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1199..1279
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1292..1375
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1391..1483
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1499..1588
                     /gene="LOC139904046"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tttctattct atgataaagg cgaaaatttc atcgatttca catcaattgt caaacatatc
       61 aacggttagc caatggaact acactatcag acaagccgta aaccaagctc aatatcaaac
      121 agccctttta ctgttttgcc aaatgatgcg aaacacctta caacccaacc atttaacctt
      181 cccaatcatc gcaaaagcat gtgggaaact gaataatata tgttactcga aaatcattca
      241 tacacacatc atgaaatccc cgtttaatgt ggatatatat gtgcagacag caacgatgga
      301 catgtatata aaatgtgacc gtatagatat cgcacacaag gtgtttgata gaatgcctca
      361 gagagacatt gcgtcttgga atgcaatgct tttaggattt gctcaattgg gtttagttga
      421 tcaagtggtg gcacttttta agcaaatgag agttgaaaat attcagcccg attcggtcac
      481 agtgatcggg atattgcagt tgattacaag tagggtcaaa gttacgcttt tgacggctat
      541 tcattctttt gggattcgaa ctggggttga tgttgacgtt tctgtttcca acacgttggt
      601 gtcttgttat gcaaaagtta gagacttaga gtcagcggag aaagtttttc atgagaccga
      661 accatgtttt gtaacggttg tttcgtggaa ttctatgata gcgggatatg cgtattttca
      721 taagtatatg aaggctctta gtttctatcg aaagatgctt tacgatggat ttaggcctga
      781 cttgagtact attcttaatt tgctttcttc gatcaaccaa catgaagcac tttttcacgg
      841 taaattgatc cattgtcatg gagttaagac gggttgcgat tcggaaatat ctatacttaa
      901 caccctagtt tcgatgtact caaagtgtga cgatcttact gctgcaagac ttatattcga
      961 cgacatgatg gatacaagaa cttgtgtttc gtggacggct atgattggtg ggtatgctga
     1021 gaaaggtgac ctagatgtgg ctttgacttt gtttgactct atggaagcca cgggtttaaa
     1081 acctgattta gttacgatac ttaatctaat tgctggttgt ggagaaatag gagcacttga
     1141 aacaggaaga tgggttgata actgtgctgt tttttacgga ttcaggagca atataatggt
     1201 cttaaatgct ttgatagaca tgtatgcaaa atgtggaagc ttaaatgaag ctcgtgagat
     1261 cttttataaa atgcgtgaaa caactgttgt ttcatggact tcaatgattt ccgggtgtgc
     1321 tttaaatgga gaatttgaag aatctttgac actttttttt cgtatgttgg atttaggaat
     1381 aaaaccaaac cacataacgt ttcttgctgc ttttcaagct tgtaatcatg gtggttttat
     1441 tgaaaaggga tgggagattt acaatcttat gatgaaaatt tataaaatca tcccgggatt
     1501 agaccattac gcttccatgg ctgatcttct tgcacgtgtt ggaaagataa aagaagcttt
     1561 gaatttgatt cgaaatatgc caatgaaacc tgattttggc atatggtcat cgttgcttag
     1621 tgcttgtaaa gttcatcgta atatggagat tggtcaaatt gcggctcgtc atctttttga
     1681 aatggaccca caagctgcag ctccttatgt agaaatggct aacatttatg cctcagtgga
     1741 tcgttgggat ggcgttattg ctgttagaaa attaatgaga aagaatcaag taaagaagtt
     1801 tcccggagaa agcgtagttc aagtaaatag gaagaattat aagtttacag ttgaagatcg
     1861 gtgtcatcct aaagggacag ttatatatga agtgttagac ggtttaggtt tacagtcaaa
     1921 agacgaattg gatttagtaa gttcacatga cgttttacca tgacactaga cttggtttac
     1981 aactacagct taagtacaag taacgaacta gagagaacta ttattgaaga aacacagaaa
     2041 gaaaatagtt taaccgatca agacaagtat tcaacctacg agcaataaaa cctttgatta
     2101 atgcttcttt cggaacaatt ccagtgcgtg ttgtactaca aagcttacta ttggggtgat
     2161 tggaggttta tgtgaagttg ctagctctga tgttcaagat aacatcaatg ctacttttcg
     2221 taaggatcta aacaacttca aggaaatagt tatcgacgta tgttcctctg aatcagaaga
     2281 tgaaaacgac tcatgtagtg ataaaatatt tcataaacaa ttggtgcttt atgatccttc
     2341 tgttaacact gaagacgtga ctgaaacctt ccgagatccc gtacagctag gccaatgccc
     2401 tttacctggt ctagagcaga acatttgcac ttgcaacttg gtatgccagg ttccttgatc
     2461 agcttccttc tatgtgcccg tcacccaaga aggcaactag tgcaccaggt aaaaggttca
     2521 atccatcata gaaggttctt ttaacggatc atcatatcac gtattcatgt taatacagtt
     2581 tatttattag tacacgcaaa cacaaacaca cactccaaac gtagtctttt ggaatactat
     2641 gtcgtttgac tctcaaaaag ttagaatatg ttaggaacca aaaatacatg ttaaaagccg
     2701 tggtccaaaa agtacattga ctcaaggaaa gggccttgta accacttaag atggaccact
     2761 cttttaagaa ttacgcgtta tctttgtgat acgtgttaag catgtattat aatatatgta
     2821 tatatatata attttattat taaacgtgtg catccaaaat tgaaagttta tagtgtatga
     2881 atcaagcaaa cgga
//
LOCUS       XM_071885979            1230 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar cation/proton
            exchanger 2-like (LOC139904047), transcript variant X1, mRNA.
ACCESSION   XM_071885979
VERSION     XM_071885979.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1230
                     /gene="LOC139904047"
                     /note="vacuolar cation/proton exchanger 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139904047"
     CDS             327..1037
                     /gene="LOC139904047"
                     /codon_start=1
                     /product="vacuolar cation/proton exchanger 2-like isoform
                     X1"
                     /protein_id="XP_071742080.1"
                     /db_xref="GeneID:139904047"
                     /translation="MAVMGILFPAVLHFTHTEVHFGKSELALSRFSSCIMLVAYASYL
                     FFQLKSHSNLYDSIDEEREDNVDDSDEEEEALEISMWEEIAWLTTLTLWVSVLSGYLV
                     DAIQGASDSWNMPVSFISVVLLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQIS
                     MFVIPFCVVVGWIMGQPMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCY
                     LIVAASFFVHVDNKSDDD"
     misc_feature    <327..1004
                     /gene="LOC139904047"
                     /note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
                     cl46895"
                     /db_xref="CDD:481235"
ORIGIN      
        1 atttatagtt actatttttt aacttcaggc aactcgcatg ctatacaggg aatacagttg
       61 gaggtcttct aaatgccacg ttcggaaatg caacagaaat gattatttca atatatgcat
      121 taaaaaatgg gatgattagg gttgttcaac agtcattatt aggatccatc ttatcaaata
      181 tgttgttagt gcttggttgt gctttcttta ctggtggcat tgtgcattac ccgaaagttc
      241 atctatttaa caagtgagtg aagcaaaagt gaacaagaat gacgtgtgcg tagacagctg
      301 caattgttag ttcaggactg ctgttaatgg ctgtaatggg catactgttt ccagctgtgc
      361 ttcattttac acacacggaa gttcattttg ggaagtcaga attggcactt tcaagattca
      421 gcagttgtat aatgctggtg gcatatgcaa gctatctatt ctttcagctt aagagtcatt
      481 ctaatcttta cgattcgatt gatgaggaaa gagaagataa tgtagatgat tctgatgaag
      541 aagaggaggc tcttgagatt tccatgtggg aagaaattgc ttggcttacc actttaactt
      601 tgtgggtatc tgtattatct ggatatctag ttgatgctat acagggagca tctgactcgt
      661 ggaatatgcc tgtttctttt attagtgtag tcctgcttcc tatcgttggt aatgctgcag
      721 aacatgcgag tgctataatg tttgctatga aagacaagct tgacattaca cttggagtgg
      781 caattggatc atcaactcag atatctatgt ttgtgatccc attctgtgtg gttgtgggtt
      841 ggatcatggg gcagccgatg gacttaaatt ttcagctttt tgagactgct actcttttta
      901 ttacagtgtt agttgtggcg tttatgctgc aggaaggaac atctaattac ttcaaaggtc
      961 tgatgctaat tctctgctat ctcatcgttg ctgccagttt ctttgtacac gtagataata
     1021 aatctgatga tgactaagaa caaatgataa ggctagaaat aaatgatgga tgttaattgg
     1081 ttaaaatgtt gtaatttggt gagccatcag atggtgtagg cgttgttgta aaactgtcaa
     1141 aaacatttgg ttattgttag aaaaaattac gtcgttggta catgtggttt gtaactattt
     1201 tcattacaac acaaagttta aattttgcgt
//
LOCUS       XM_071885980            1461 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar cation/proton
            exchanger 2-like (LOC139904047), transcript variant X2, mRNA.
ACCESSION   XM_071885980
VERSION     XM_071885980.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1461
                     /gene="LOC139904047"
                     /note="vacuolar cation/proton exchanger 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904047"
     CDS             663..1268
                     /gene="LOC139904047"
                     /codon_start=1
                     /product="vacuolar cation/proton exchanger 2-like isoform
                     X2"
                     /protein_id="XP_071742081.1"
                     /db_xref="GeneID:139904047"
                     /translation="MLVAYASYLFFQLKSHSNLYDSIDEEREDNVDDSDEEEEALEIS
                     MWEEIAWLTTLTLWVSVLSGYLVDAIQGASDSWNMPVSFISVVLLPIVGNAAEHASAI
                     MFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWIMGQPMDLNFQLFETATLFITVL
                     VVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDNKSDDD"
     misc_feature    <663..1235
                     /gene="LOC139904047"
                     /note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
                     cl46895"
                     /db_xref="CDD:481235"
ORIGIN      
        1 acccattgac tggtgttgac ggattaatta gaagcatttt gaaaaatcta atctgccttt
       61 aaaaaggatt aatggggtat taatgaggag ttttacaacc atgcttatta gactgtagga
      121 ttgtcgttac gagtcaattg attaggactg atttcccaat caaccaggta agctaggaat
      181 tgcgtaatac ttgatcatga cccacgagca ccacattgtt tgttacgtag cttagcatgt
      241 gccgcgacta acttattctt gcatgtgtag gtgctaattc ggatgccaat atatcttaac
      301 taattaaatt ccatataaat tatagactag tagcagttgc cttaaataaa ctccaatata
      361 tcttgacaac attctcttgg aaatgcagtt ggaggtcttc taaatgccac gttcggaaat
      421 gcaacagaaa tgattatttc aatatatgca ttaaaaaatg ggatgattag ggttgttcaa
      481 cagtcattat taggatccat cttatcaaat atgttgttag tgcttggttg tgctttcttt
      541 actggtggca ttgtgcatta cccgaaagtt catctattta acaagctgtg cttcatttta
      601 cacacacgga agttcatttt gggaagtcag aattggcact ttcaagattc agcagttgta
      661 taatgctggt ggcatatgca agctatctat tctttcagct taagagtcat tctaatcttt
      721 acgattcgat tgatgaggaa agagaagata atgtagatga ttctgatgaa gaagaggagg
      781 ctcttgagat ttccatgtgg gaagaaattg cttggcttac cactttaact ttgtgggtat
      841 ctgtattatc tggatatcta gttgatgcta tacagggagc atctgactcg tggaatatgc
      901 ctgtttcttt tattagtgta gtcctgcttc ctatcgttgg taatgctgca gaacatgcga
      961 gtgctataat gtttgctatg aaagacaagc ttgacattac acttggagtg gcaattggat
     1021 catcaactca gatatctatg tttgtgatcc cattctgtgt ggttgtgggt tggatcatgg
     1081 ggcagccgat ggacttaaat tttcagcttt ttgagactgc tactcttttt attacagtgt
     1141 tagttgtggc gtttatgctg caggaaggaa catctaatta cttcaaaggt ctgatgctaa
     1201 ttctctgcta tctcatcgtt gctgccagtt tctttgtaca cgtagataat aaatctgatg
     1261 atgactaaga acaaatgata aggctagaaa taaatgatgg atgttaattg gttaaaatgt
     1321 tgtaatttgg tgagccatca gatggtgtag gcgttgttgt aaaactgtca aaaacatttg
     1381 gttattgtta gaaaaaatta cgtcgttggt acatgtggtt tgtaactatt ttcattacaa
     1441 cacaaagttt aaattttgcg t
//
LOCUS       XM_071885981            2974 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At4g19191, mitochondrial-like
            (LOC139904048), transcript variant X1, mRNA.
ACCESSION   XM_071885981
VERSION     XM_071885981.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2974
                     /gene="LOC139904048"
                     /note="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904048"
     CDS             11..1963
                     /gene="LOC139904048"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like"
                     /protein_id="XP_071742082.1"
                     /db_xref="GeneID:139904048"
                     /translation="MIKAKISSISHQLSNISTVSQWNYTIRQAVNQAQYQTALLLFCQ
                     MMRNTLQPNHLTFPIIAKACGKLNNICYSKIIHTHIMKSPFNVDIYVQTATMDMYIKC
                     DRIDIAHKVFDRMPQRDIASWNAMLLGFAQLGLVDQVVALFKQMRVENIQPDSVTVIG
                     ILQLITSRVKVTLLTAIHSFGIRTGVDVDVSVSNTLVSCYAKVRDLESAEKVFHETEP
                     CFVTVVSWNSMIAGYAYFHKYMKALSFYRKMLYDGFRPDLSTILNLLSSINQHEALFH
                     GKLIHCHGVKTGCDSEISILNTLVSMYSKCDDLTAARLIFDDMMDTRTCVSWTAMIGG
                     YAEKGDLDVALTLFDSMEATGLKPDLVTILNLIAGCGEIGALETGRWVDNCAVFYGFR
                     SNIMVLNALIDMYAKCGSLNEAREIFYKMRETTVVSWTSMISGCALNGEFEESLTLFF
                     RMLDLGIKPNHITFLAAFQACNHGGFIEKGWEIYNLMMKIYKIIPGLDHYASMADLLA
                     RVGKIKEALNLIRNMPMKPDFGIWSSLLSACKVHRNMEIGQIAARHLFEMDPQAAAPY
                     VEMANIYASVDRWDGVIAVRKLMRKNQVKKFPGESVVQVNRKNYKFTVEDRCHPKGTV
                     IYEVLDGLGLQSKDELDLVSSHDVLP"
     misc_feature    74..1906
                     /gene="LOC139904048"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    176..259
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    296..364
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    374..457
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    473..661
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    677..760
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    893..976
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    989..1072
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1199..1279
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1292..1375
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1391..1483
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1499..1588
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tttctattct atgataaagg cgaaaatttc atcgatttca catcaattgt caaacatatc
       61 aacggttagc caatggaact acactatcag acaagccgta aaccaagctc aatatcaaac
      121 agccctttta ctgttttgcc aaatgatgcg aaacacctta caacccaacc atttaacctt
      181 cccaatcatc gcaaaagcat gtgggaaact gaataatata tgttactcga aaatcattca
      241 tacacacatc atgaaatccc cgtttaatgt ggatatatat gtgcagacag caacgatgga
      301 catgtatata aaatgtgacc gtatagatat cgcacacaag gtgtttgata gaatgcctca
      361 gagagacatt gcgtcttgga atgcaatgct tttaggattt gctcaattgg gtttagttga
      421 tcaagtggtg gcacttttta agcaaatgag agttgaaaat attcagcccg attcggtcac
      481 agtgatcggg atattgcagt tgattacaag tagggtcaaa gttacgcttt tgacggctat
      541 tcattctttt gggattcgaa ctggggttga tgttgacgtt tctgtttcca acacgttggt
      601 gtcttgttat gcaaaagtta gagacttaga gtcagcggag aaagtttttc atgagaccga
      661 accatgtttt gtaacggttg tttcgtggaa ttctatgata gcgggatatg cgtattttca
      721 taagtatatg aaggctctta gtttctatcg aaagatgctt tacgatggat ttaggcctga
      781 cttgagtact attcttaatt tgctttcttc gatcaaccaa catgaagcac tttttcacgg
      841 taaattgatc cattgtcatg gagttaagac gggttgcgat tcggaaatat ctatacttaa
      901 caccctagtt tcgatgtact caaagtgtga cgatcttact gctgcaagac ttatattcga
      961 cgacatgatg gatacaagaa cttgtgtttc gtggacggct atgattggtg ggtatgctga
     1021 gaaaggtgac ctagatgtgg ctttgacttt gtttgactct atggaagcca cgggtttaaa
     1081 acctgattta gttacgatac ttaatctaat tgctggttgt ggagaaatag gagcacttga
     1141 aacaggaaga tgggttgata actgtgctgt tttttacgga ttcaggagca atataatggt
     1201 cttaaatgct ttgatagaca tgtatgcaaa atgtggaagc ttaaatgaag ctcgtgagat
     1261 cttttataaa atgcgtgaaa caactgttgt ttcatggact tcaatgattt ccgggtgtgc
     1321 tttaaatgga gaatttgaag aatctttgac actttttttt cgtatgttgg atttaggaat
     1381 aaaaccaaac cacataacgt ttcttgctgc ttttcaagct tgtaatcatg gtggttttat
     1441 tgaaaaggga tgggagattt acaatcttat gatgaaaatt tataaaatca tcccgggatt
     1501 agaccattac gcttccatgg ctgatcttct tgcacgtgtt ggaaagataa aagaagcttt
     1561 gaatttgatt cgaaatatgc caatgaaacc tgattttggc atatggtcat cgttgcttag
     1621 tgcttgtaaa gttcatcgta atatggagat tggtcaaatt gcggctcgtc atctttttga
     1681 aatggaccca caagctgcag ctccttatgt agaaatggct aacatttatg cctcagtgga
     1741 tcgttgggat ggcgttattg ctgttagaaa attaatgaga aagaatcaag taaagaagtt
     1801 tcccggagaa agcgtagttc aagtaaatag gaagaattat aagtttacag ttgaagatcg
     1861 gtgtcatcct aaagggacag ttatatatga agtgttagac ggtttaggtt tacagtcaaa
     1921 agacgaattg gatttagtaa gttcacatga cgttttacca tgacactaga cttggtttac
     1981 aactacagct taagtacaag taaagaacta gagagaacta ttattgaaga aacacagaaa
     2041 gaaaatagtt taaccgatca agacaagtat tcaacctacg agcaataaaa cctttgatta
     2101 atgcttcttt cggaacaatt ccagtgcgtg ttgtactaca aagcttacta ttggggtgat
     2161 tggaggttta tgtgaagttg ctagctctga tgttcaagat aacatcaatg ctacttttcg
     2221 taaggatcta aacaacttca aggaaatagt tatcgacgta tgttcctctg aatcagaaga
     2281 tgaaaacgac tcatgtagtg ataaaatatt tcataaacaa ttggtgcttt atgatccttc
     2341 tgttaacact gaagacgtga ctgaaacctt ccgagatccc gtacagacgc tgtcttcagt
     2401 acattagcat gattgttgtg atggctttat caactttgta ttgctgtttg atgcgaaata
     2461 ccaatattct tgcagctagg ccaatgccct ttacctggtc tagagcagaa catttgcact
     2521 tgcaacttgg tatgccaggt tccttgatca gcttccttct atgtgcccgt cacccaagaa
     2581 ggcaactagt gcaccaggta aaaggttcaa tccatcatag aaggttcttt taacggatca
     2641 tcatatcacg tattcatgtt aatacagttt atttattagt acacgcaaac acaaacacac
     2701 actccaaacg tagtcttttg gaatactatg tcgtttgact ctcaaaaagt tagaatatgt
     2761 taggaaccaa aaatacatgt taaaagccgt ggtccaaaaa gtacattgac tcaaggaaag
     2821 ggccttgtaa ccacttaaga tggaccactc ttttaagaat tacgcgttat ctttgtgata
     2881 cgtgttaagc atgtattata atatatgtat atatatataa ttttattatt aaacgtgtgc
     2941 atccaaaatt gaaagtttat agtgtatgaa tcaa
//
LOCUS       XM_071885982            2885 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At4g19191, mitochondrial-like
            (LOC139904048), transcript variant X2, mRNA.
ACCESSION   XM_071885982
VERSION     XM_071885982.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2885
                     /gene="LOC139904048"
                     /note="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904048"
     CDS             11..1963
                     /gene="LOC139904048"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like"
                     /protein_id="XP_071742083.1"
                     /db_xref="GeneID:139904048"
                     /translation="MIKAKISSISHQLSNISTVSQWNYTIRQAVNQAQYQTALLLFCQ
                     MMRNTLQPNHLTFPIIAKACGKLNNICYSKIIHTHIMKSPFNVDIYVQTATMDMYIKC
                     DRIDIAHKVFDRMPQRDIASWNAMLLGFAQLGLVDQVVALFKQMRVENIQPDSVTVIG
                     ILQLITSRVKVTLLTAIHSFGIRTGVDVDVSVSNTLVSCYAKVRDLESAEKVFHETEP
                     CFVTVVSWNSMIAGYAYFHKYMKALSFYRKMLYDGFRPDLSTILNLLSSINQHEALFH
                     GKLIHCHGVKTGCDSEISILNTLVSMYSKCDDLTAARLIFDDMMDTRTCVSWTAMIGG
                     YAEKGDLDVALTLFDSMEATGLKPDLVTILNLIAGCGEIGALETGRWVDNCAVFYGFR
                     SNIMVLNALIDMYAKCGSLNEAREIFYKMRETTVVSWTSMISGCALNGEFEESLTLFF
                     RMLDLGIKPNHITFLAAFQACNHGGFIEKGWEIYNLMMKIYKIIPGLDHYASMADLLA
                     RVGKIKEALNLIRNMPMKPDFGIWSSLLSACKVHRNMEIGQIAARHLFEMDPQAAAPY
                     VEMANIYASVDRWDGVIAVRKLMRKNQVKKFPGESVVQVNRKNYKFTVEDRCHPKGTV
                     IYEVLDGLGLQSKDELDLVSSHDVLP"
     misc_feature    74..1906
                     /gene="LOC139904048"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    176..259
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    296..364
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    374..457
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    473..661
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    677..760
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    893..976
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    989..1072
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1199..1279
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1292..1375
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1391..1483
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1499..1588
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tttctattct atgataaagg cgaaaatttc atcgatttca catcaattgt caaacatatc
       61 aacggttagc caatggaact acactatcag acaagccgta aaccaagctc aatatcaaac
      121 agccctttta ctgttttgcc aaatgatgcg aaacacctta caacccaacc atttaacctt
      181 cccaatcatc gcaaaagcat gtgggaaact gaataatata tgttactcga aaatcattca
      241 tacacacatc atgaaatccc cgtttaatgt ggatatatat gtgcagacag caacgatgga
      301 catgtatata aaatgtgacc gtatagatat cgcacacaag gtgtttgata gaatgcctca
      361 gagagacatt gcgtcttgga atgcaatgct tttaggattt gctcaattgg gtttagttga
      421 tcaagtggtg gcacttttta agcaaatgag agttgaaaat attcagcccg attcggtcac
      481 agtgatcggg atattgcagt tgattacaag tagggtcaaa gttacgcttt tgacggctat
      541 tcattctttt gggattcgaa ctggggttga tgttgacgtt tctgtttcca acacgttggt
      601 gtcttgttat gcaaaagtta gagacttaga gtcagcggag aaagtttttc atgagaccga
      661 accatgtttt gtaacggttg tttcgtggaa ttctatgata gcgggatatg cgtattttca
      721 taagtatatg aaggctctta gtttctatcg aaagatgctt tacgatggat ttaggcctga
      781 cttgagtact attcttaatt tgctttcttc gatcaaccaa catgaagcac tttttcacgg
      841 taaattgatc cattgtcatg gagttaagac gggttgcgat tcggaaatat ctatacttaa
      901 caccctagtt tcgatgtact caaagtgtga cgatcttact gctgcaagac ttatattcga
      961 cgacatgatg gatacaagaa cttgtgtttc gtggacggct atgattggtg ggtatgctga
     1021 gaaaggtgac ctagatgtgg ctttgacttt gtttgactct atggaagcca cgggtttaaa
     1081 acctgattta gttacgatac ttaatctaat tgctggttgt ggagaaatag gagcacttga
     1141 aacaggaaga tgggttgata actgtgctgt tttttacgga ttcaggagca atataatggt
     1201 cttaaatgct ttgatagaca tgtatgcaaa atgtggaagc ttaaatgaag ctcgtgagat
     1261 cttttataaa atgcgtgaaa caactgttgt ttcatggact tcaatgattt ccgggtgtgc
     1321 tttaaatgga gaatttgaag aatctttgac actttttttt cgtatgttgg atttaggaat
     1381 aaaaccaaac cacataacgt ttcttgctgc ttttcaagct tgtaatcatg gtggttttat
     1441 tgaaaaggga tgggagattt acaatcttat gatgaaaatt tataaaatca tcccgggatt
     1501 agaccattac gcttccatgg ctgatcttct tgcacgtgtt ggaaagataa aagaagcttt
     1561 gaatttgatt cgaaatatgc caatgaaacc tgattttggc atatggtcat cgttgcttag
     1621 tgcttgtaaa gttcatcgta atatggagat tggtcaaatt gcggctcgtc atctttttga
     1681 aatggaccca caagctgcag ctccttatgt agaaatggct aacatttatg cctcagtgga
     1741 tcgttgggat ggcgttattg ctgttagaaa attaatgaga aagaatcaag taaagaagtt
     1801 tcccggagaa agcgtagttc aagtaaatag gaagaattat aagtttacag ttgaagatcg
     1861 gtgtcatcct aaagggacag ttatatatga agtgttagac ggtttaggtt tacagtcaaa
     1921 agacgaattg gatttagtaa gttcacatga cgttttacca tgacactaga cttggtttac
     1981 aactacagct taagtacaag taaagaacta gagagaacta ttattgaaga aacacagaaa
     2041 gaaaatagtt taaccgatca agacaagtat tcaacctacg agcaataaaa cctttgatta
     2101 atgcttcttt cggaacaatt ccagtgcgtg ttgtactaca aagcttacta ttggggtgat
     2161 tggaggttta tgtgaagttg ctagctctga tgttcaagat aacatcaatg ctacttttcg
     2221 taaggatcta aacaacttca aggaaatagt tatcgacgta tgttcctctg aatcagaaga
     2281 tgaaaacgac tcatgtagtg ataaaatatt tcataaacaa ttggtgcttt atgatccttc
     2341 tgttaacact gaagacgtga ctgaaacctt ccgagatccc gtacagctag gccaatgccc
     2401 tttacctggt ctagagcaga acatttgcac ttgcaacttg gtatgccagg ttccttgatc
     2461 agcttccttc tatgtgcccg tcacccaaga aggcaactag tgcaccaggt aaaaggttca
     2521 atccatcata gaaggttctt ttaacggatc atcatatcac gtattcatgt taatacagtt
     2581 tatttattag tacacgcaaa cacaaacaca cactccaaac gtagtctttt ggaatactat
     2641 gtcgtttgac tctcaaaaag ttagaatatg ttaggaacca aaaatacatg ttaaaagccg
     2701 tggtccaaaa agtacattga ctcaaggaaa gggccttgta accacttaag atggaccact
     2761 cttttaagaa ttacgcgtta tctttgtgat acgtgttaag catgtattat aatatatgta
     2821 tatatatata attttattat taaacgtgtg catccaaaat tgaaagttta tagtgtatga
     2881 atcaa
//
LOCUS       XM_071885983            2836 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At4g19191, mitochondrial-like
            (LOC139904048), transcript variant X3, mRNA.
ACCESSION   XM_071885983
VERSION     XM_071885983.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2836
                     /gene="LOC139904048"
                     /note="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904048"
     CDS             11..1963
                     /gene="LOC139904048"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial-like"
                     /protein_id="XP_071742084.1"
                     /db_xref="GeneID:139904048"
                     /translation="MIKAKISSISHQLSNISTVSQWNYTIRQAVNQAQYQTALLLFCQ
                     MMRNTLQPNHLTFPIIAKACGKLNNICYSKIIHTHIMKSPFNVDIYVQTATMDMYIKC
                     DRIDIAHKVFDRMPQRDIASWNAMLLGFAQLGLVDQVVALFKQMRVENIQPDSVTVIG
                     ILQLITSRVKVTLLTAIHSFGIRTGVDVDVSVSNTLVSCYAKVRDLESAEKVFHETEP
                     CFVTVVSWNSMIAGYAYFHKYMKALSFYRKMLYDGFRPDLSTILNLLSSINQHEALFH
                     GKLIHCHGVKTGCDSEISILNTLVSMYSKCDDLTAARLIFDDMMDTRTCVSWTAMIGG
                     YAEKGDLDVALTLFDSMEATGLKPDLVTILNLIAGCGEIGALETGRWVDNCAVFYGFR
                     SNIMVLNALIDMYAKCGSLNEAREIFYKMRETTVVSWTSMISGCALNGEFEESLTLFF
                     RMLDLGIKPNHITFLAAFQACNHGGFIEKGWEIYNLMMKIYKIIPGLDHYASMADLLA
                     RVGKIKEALNLIRNMPMKPDFGIWSSLLSACKVHRNMEIGQIAARHLFEMDPQAAAPY
                     VEMANIYASVDRWDGVIAVRKLMRKNQVKKFPGESVVQVNRKNYKFTVEDRCHPKGTV
                     IYEVLDGLGLQSKDELDLVSSHDVLP"
     misc_feature    74..1906
                     /gene="LOC139904048"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    176..259
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    296..364
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    374..457
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    473..661
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    677..760
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    893..976
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    989..1072
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1199..1279
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1292..1375
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1391..1483
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1499..1588
                     /gene="LOC139904048"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tttctattct atgataaagg cgaaaatttc atcgatttca catcaattgt caaacatatc
       61 aacggttagc caatggaact acactatcag acaagccgta aaccaagctc aatatcaaac
      121 agccctttta ctgttttgcc aaatgatgcg aaacacctta caacccaacc atttaacctt
      181 cccaatcatc gcaaaagcat gtgggaaact gaataatata tgttactcga aaatcattca
      241 tacacacatc atgaaatccc cgtttaatgt ggatatatat gtgcagacag caacgatgga
      301 catgtatata aaatgtgacc gtatagatat cgcacacaag gtgtttgata gaatgcctca
      361 gagagacatt gcgtcttgga atgcaatgct tttaggattt gctcaattgg gtttagttga
      421 tcaagtggtg gcacttttta agcaaatgag agttgaaaat attcagcccg attcggtcac
      481 agtgatcggg atattgcagt tgattacaag tagggtcaaa gttacgcttt tgacggctat
      541 tcattctttt gggattcgaa ctggggttga tgttgacgtt tctgtttcca acacgttggt
      601 gtcttgttat gcaaaagtta gagacttaga gtcagcggag aaagtttttc atgagaccga
      661 accatgtttt gtaacggttg tttcgtggaa ttctatgata gcgggatatg cgtattttca
      721 taagtatatg aaggctctta gtttctatcg aaagatgctt tacgatggat ttaggcctga
      781 cttgagtact attcttaatt tgctttcttc gatcaaccaa catgaagcac tttttcacgg
      841 taaattgatc cattgtcatg gagttaagac gggttgcgat tcggaaatat ctatacttaa
      901 caccctagtt tcgatgtact caaagtgtga cgatcttact gctgcaagac ttatattcga
      961 cgacatgatg gatacaagaa cttgtgtttc gtggacggct atgattggtg ggtatgctga
     1021 gaaaggtgac ctagatgtgg ctttgacttt gtttgactct atggaagcca cgggtttaaa
     1081 acctgattta gttacgatac ttaatctaat tgctggttgt ggagaaatag gagcacttga
     1141 aacaggaaga tgggttgata actgtgctgt tttttacgga ttcaggagca atataatggt
     1201 cttaaatgct ttgatagaca tgtatgcaaa atgtggaagc ttaaatgaag ctcgtgagat
     1261 cttttataaa atgcgtgaaa caactgttgt ttcatggact tcaatgattt ccgggtgtgc
     1321 tttaaatgga gaatttgaag aatctttgac actttttttt cgtatgttgg atttaggaat
     1381 aaaaccaaac cacataacgt ttcttgctgc ttttcaagct tgtaatcatg gtggttttat
     1441 tgaaaaggga tgggagattt acaatcttat gatgaaaatt tataaaatca tcccgggatt
     1501 agaccattac gcttccatgg ctgatcttct tgcacgtgtt ggaaagataa aagaagcttt
     1561 gaatttgatt cgaaatatgc caatgaaacc tgattttggc atatggtcat cgttgcttag
     1621 tgcttgtaaa gttcatcgta atatggagat tggtcaaatt gcggctcgtc atctttttga
     1681 aatggaccca caagctgcag ctccttatgt agaaatggct aacatttatg cctcagtgga
     1741 tcgttgggat ggcgttattg ctgttagaaa attaatgaga aagaatcaag taaagaagtt
     1801 tcccggagaa agcgtagttc aagtaaatag gaagaattat aagtttacag ttgaagatcg
     1861 gtgtcatcct aaagggacag ttatatatga agtgttagac ggtttaggtt tacagtcaaa
     1921 agacgaattg gatttagtaa gttcacatga cgttttacca tgacactaga cttggtttac
     1981 aactacagct taagtacaag taaagaacta gagagaacta ttattgaaga aacacagaaa
     2041 gaaaatagtt taaccgatca agacaagtat tcaacctacg agcaataaaa cctttgatta
     2101 atgcttcttt cggaacaatt ccagtgcgtg ttgtactaca aagcttacta ttggggtgat
     2161 tggaggttta tgtgaagttg ctagctctga tgttcaagat aacatcaatg ctacttttcg
     2221 taaggatcta aacaacttca aggaaatagt tatcgacgta tgttcctctg aatcagaaga
     2281 tgaaaacgac tcatgtagtg ataaaatatt tcataaacaa ttggtgcttt atgatccttc
     2341 tgttaacact gaagacgtga ctgaaacctt ccgagatccc gtacagacgc tgtcttcagt
     2401 acattagcat gattgttgtg atggctttat caactttgta ttgctgtttg atgcgaaata
     2461 ccaatattct tgcagctagg ccaatgccct ttacctggtc tagagcagaa catttgcact
     2521 tgcaacttgg tatgccaggt tccttgatca gcttccttct atgtgcccgt cacccaagaa
     2581 ggcaactagt gcaccaggca cttcttgatt tacaaactcc gaggtttgat tctggccaaa
     2641 aagttgataa cctgcaactc cgatcggcac ataatcagct acaactgtga agtgtaaatt
     2701 taggattcta aagctacttc aaacacatca taaccactta agaaggttga agtgttgaac
     2761 ccaacgaata ggaataaagt gaatcaagta tatcaaatgg atttgatatg aacttttagt
     2821 gcttttcata gggagg
//
LOCUS       XM_071885984            1458 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-amyrin
            28-monooxygenase-like (LOC139904049), mRNA.
ACCESSION   XM_071885984
VERSION     XM_071885984.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1458
                     /gene="LOC139904049"
                     /note="beta-amyrin 28-monooxygenase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139904049"
     CDS             1..1458
                     /gene="LOC139904049"
                     /codon_start=1
                     /product="beta-amyrin 28-monooxygenase-like"
                     /protein_id="XP_071742085.1"
                     /db_xref="GeneID:139904049"
                     /translation="MDILYTSASLLSLVLVIYFYIHFFVYRSKPFNDQKLLPRGNKGW
                     PVIGENYEFLAAGWKGHPEKCWKFSFIYDRMSIFSSIVFRTSLLLEDVAVLCGSQGNK
                     FVFSNENKNMQAWLPASVLKIFPASPDTYKAENTKFRKFLVNTLKKKALQQFVPIMDN
                     VTQRYFETEWNGKKEIMAYELAKTFAFGLACKIFLSIDDPELIGYLSGSFENIITGLF
                     SMPIDLPMTPYRKAINAVKVIRKELVVIAKQREIDLDEGKATPTQDILSHMILLNEEN
                     GEFPGKYELIADKIQGLLMGGHDTLSSVCSSLVKFLAELPEIYNGIYVEQIEIAKSKA
                     PGEPLVLNDLSKMKYSWKVACEVLRLSPMGQGYRQVITDIMYNGYHIPKGWKIYWTAA
                     STHKNPEYFPEPEKFDPSRFEGNGPEPYTFVPFGGGAHLCPGKEYARLAILVFMHHLV
                     TKFKWEKTFADEQIVYNPMPKPDKGLPIRIYPHIS"
     misc_feature    220..1446
                     /gene="LOC139904049"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; Region: CYP90-like;
                     cd11043"
                     /db_xref="CDD:410669"
     misc_feature    order(403..405,415..417,436..438,568..570,874..879,
                     886..891,898..903,910..912,1072..1074,1102..1104,
                     1171..1173,1270..1278,1288..1302,1309..1314)
                     /gene="LOC139904049"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410669"
     misc_feature    order(637..642,874..876,883..888,898..900,1093..1098,
                     1099..1101)
                     /gene="LOC139904049"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410669"
ORIGIN      
        1 atggatatct tgtatacttc tgcttctctt ctatcccttg ttcttgtcat ttacttttac
       61 attcattttt tcgtctatcg ttcgaagcca ttcaatgatc aaaaattact cccgcgtggt
      121 aataaagggt ggccggtaat tggagagaat tacgagtttc ttgctgccgg atggaaaggt
      181 catcctgaaa agtgttggaa atttagtttc atatacgatc gcatgtctat attttcatct
      241 atagttttta gaacttctct actgttagag gacgttgcgg ttctatgtgg ttctcaaggt
      301 aataagttcg ttttctcaaa tgagaacaag aatatgcaag cttggttacc agcttcggta
      361 ctcaaaatct ttccagcttc cccggatact tataaggcag aaaatactaa gtttcgaaaa
      421 ttccttgtca acactcttaa gaagaaagca ttgcaacaat ttgtccccat tatggataat
      481 gttacgcaac gatattttga aactgaatgg aatgggaaga aagaaattat ggcatatgaa
      541 ctagcaaaaa cctttgcttt tggacttgca tgcaagatct ttcttagtat tgatgatcct
      601 gaactgatcg gatatttatc cggctcattt gagaacatca ttacagggct tttttcaatg
      661 ccaattgatt tacctatgac accgtataga aaagcaatca atgcagtcaa ggttatacga
      721 aaagaacttg tagtcatagc aaaacaaagg gaaattgatt tagatgaagg gaaagcaaca
      781 ccaacccaag acatattgtc acatatgatt cttcttaacg aggaaaatgg cgagttccca
      841 gggaaatatg aacttattgc tgacaagatc caagggttgt tgatgggagg ccatgatact
      901 ttgagctctg tttgttcttc actagtaaaa tttcttgctg agttgcctga gatctataat
      961 ggtatatatg tagaacaaat tgaaattgca aagtctaaag cacctggaga accgttggtg
     1021 ttgaatgatc tatcgaaaat gaaatactca tggaaagttg catgcgaggt tctaagatta
     1081 tccccaatgg gccaaggtta tagacaagtc attaccgata tcatgtacaa tggctaccat
     1141 atccccaagg gctggaagat ttattggact gcagcctcga cccacaaaaa cccagagtac
     1201 tttccagaac ccgaaaaatt tgacccatca agattcgaag gcaacggtcc cgaaccttat
     1261 acctttgtgc cgttcggagg aggagctcat ctgtgtcctg gaaaagagta cgctcgacta
     1321 gcaatacttg tgttcatgca tcatctagta acaaaattca aatgggagaa aacatttgcg
     1381 gatgaacaaa ttgtttacaa cccaatgccc aaaccggaca agggtcttcc tattcgtatt
     1441 taccctcata tatcttaa
//
LOCUS       XM_071885985            2700 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein STRUBBELIG-RECEPTOR
            FAMILY 6-like (LOC139904052), mRNA.
ACCESSION   XM_071885985
VERSION     XM_071885985.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2700
                     /gene="LOC139904052"
                     /note="protein STRUBBELIG-RECEPTOR FAMILY 6-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904052"
     CDS             364..2514
                     /gene="LOC139904052"
                     /codon_start=1
                     /product="protein STRUBBELIG-RECEPTOR FAMILY 6-like"
                     /protein_id="XP_071742086.1"
                     /db_xref="GeneID:139904052"
                     /translation="MTSSSLCFFFFSIIFVIRPYFINGDTDSSDASALNAMYQNLNSP
                     GQLTKWSSTSGDPCGENWKGVTCSGSRVTEIQLSSLGLSGGIGYQLSSLTSVTNFDVS
                     NNNLGNQIPYSLPPNLQRLNLAGCGYTGNLPYSISQMTSLKYLNMAGNQISGSLPDMF
                     GQLSALSTLDLSFNSFTGDLPQSFSLLLSATDIYLQNNQFTGSIDVLANLPLKNLNVA
                     NNKFTGWVPSQLNNINLQKDGNLWSSGPAPPPPPGTPSAGRGNQNRQPSGNNSHNPTS
                     GVGDKKSGVGGGAIAGIVISIIILVLVVGLIIIALFLFKKRSKKSSNDLEKTEDRSFA
                     PHKQEYQVSTNETSADVIDLKPPPMAMAMAMDHHKSFDDHEFVEIPVVDKKVSVAPLD
                     VISYSIADLQIATDSFSADNLIGEGSTGRVFRAQFEDGKVVAIKKIKPSAAFPGGGLS
                     ADDFIDIVSDVSRLRHPNVTELVGFCCEHGQHLLVYEFLKNGSLYDVLHLSDEYTKPL
                     IWNSRVKIALGTARALEYLHEVCSPSFVHKHINSANILLDTELNPHLSDCGLASLVFD
                     ADHYHQGLDDSGYSAPEVSMSGQYTIKSDVYGFGVTMLELLTGRKSFDSSRTRAEQSL
                     VQWATPQLHDMDALAKMVDPALKGLYPVKSLSRFADVIALCVQSEPEFRPPMSEVVQA
                     LVRLVQRAYMSKRTVGIDQGSSLHAGTQDSQEYM"
     misc_feature    <478..2412
                     /gene="LOC139904052"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    649..714
                     /gene="LOC139904052"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    715..786
                     /gene="LOC139904052"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    787..858
                     /gene="LOC139904052"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    859..930
                     /gene="LOC139904052"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    931..993
                     /gene="LOC139904052"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1603..2421
                     /gene="LOC139904052"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1603..1614,1621..1623,1627..1629,1663..1665,
                     1669..1671,1771..1773,1819..1830,1978..1980,1990..1995,
                     1999..2001,2029..2034)
                     /gene="LOC139904052"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     polyA_site      2700
                     /gene="LOC139904052"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttatcgttcc cgagaatgta tagggaacca tatcattaat taattataat tataattatt
       61 aattatgaat aaaaaatagg aaaatataga ggtttgcttc aatattctgc cagtgattga
      121 ctctgattgt tgttccccag gggtgaggtc gagagtgagg gtgaggtcga gagccacatt
      181 tagctttaaa ttttggttag cagtgaggta cttgattttg ttttgatttg attcaaaaag
      241 aaaaagaaag aaaatgaatt agggaaaaac aaaaagaaag acttggtaaa aatctgaagc
      301 tgctgtttgt cggtgacatt cattacaata cgaacgactg acgctaacaa gtaaggaaaa
      361 gaaatgacgt catcatcact ttgtttcttc ttcttttcaa tcatatttgt tattcgtcca
      421 tacttcatca atggcgacac agattcatcc gatgcctctg ctttgaatgc catgtatcag
      481 aatttgaatt caccgggaca attaactaaa tggagctcaa ccagtgggga cccttgtgga
      541 gaaaactgga aaggcgttac ctgttctgga tcaagagtca cagaaattca actgtccagt
      601 ctagggctct ctggtggaat agggtatcag ctttcaagtt tgacctcagt aactaacttt
      661 gatgtaagca acaacaatct gggcaatcag ataccataca gtcttcctcc caacttgcaa
      721 agattaaatc ttgctggatg tggatacact ggcaaccttc cgtattccat atcacaaatg
      781 acttctctga aatacttaaa catggctgga aatcaaatta gtggctcatt gcctgacatg
      841 tttggacagc tttcagctct atctactttg gatctgtctt tcaattcttt tacgggtgac
      901 cttccccaga gtttcagctt gttgttaagt gcaactgata tttatctgca gaacaaccag
      961 tttacaggtt ctattgatgt ccttgccaat cttcccctca aaaatctgaa cgttgccaat
     1021 aacaaattta ctgggtgggt tcctagtcaa ctgaacaaca tcaatttgca aaaggatggt
     1081 aacttgtgga gctcagggcc tgcaccccca cctccacctg gcacaccttc agctggaagg
     1141 ggtaaccaaa atcgacaacc aagtggcaat aatagccata atcccactag tggtgttggt
     1201 gacaagaaat ctggtgttgg tggtggagct atagcaggaa ttgtgatatc tattattata
     1261 cttgttcttg ttgttggtct cattattatt gccttgtttt tgttcaagaa aagatccaaa
     1321 aagtcatcta atgatttgga aaagactgag gaccggtctt ttgctccaca taaacaggaa
     1381 tatcaagtga gcacaaatga aacttcagca gatgttatag atctgaaacc gccacccatg
     1441 gctatggcta tggctatgga tcatcacaag tcatttgatg accatgaatt cgtagaaatt
     1501 cctgttgttg acaagaaagt aagtgtggcc ccactagatg ttatatcata ctcaatagct
     1561 gatcttcaaa tagctacaga cagctttagt gctgacaacc tcatcggtga aggatctact
     1621 ggacgtgttt tccgtgctca atttgaagat ggaaaggttg ttgccattaa gaaaataaag
     1681 ccgtctgctg ctttccctgg cggtggttta tcagcagatg atttcattga tatagtttca
     1741 gatgtgtcca gattgcggca tcctaatgta actgagcttg ttggattctg ctgtgagcat
     1801 ggacagcacc ttttagttta tgagttcctt aaaaatggat ctctctatga tgtcttgcat
     1861 ctctcagatg aatacaccaa accattaata tggaatagcc gtgtcaaaat tgctttaggg
     1921 acagcacgtg cattggaata tctacatgaa gtatgctcgc cttcatttgt tcataaacat
     1981 attaattcag ccaatatctt attagacaca gagctcaatc ctcatctttc tgactgtggg
     2041 ttagcaagtc tcgtctttga tgcagatcat tatcatcagg gattggatga tagtggatac
     2101 agtgccccag aggtttccat gagtggtcag tacacaataa aaagtgatgt gtatggattt
     2161 ggtgttacca tgttggaact actaaccgga agaaaatcat ttgatagttc aaggacaagg
     2221 gcagaacagt cattggtgca gtgggcgaca cctcagcttc atgacatgga tgctcttgca
     2281 aagatggtag atcctgcact taaaggactt tatccagtca aatctctttc tcgatttgca
     2341 gatgtaattg cattgtgtgt acagtcggag ccagagttta ggccgcccat gtcagaagtg
     2401 gttcaggcat tggttagact tgttcagagg gcatatatga gcaagagaac tgttggtata
     2461 gatcaaggtt catctttgca tgcgggcacc caggactcac aggaatacat gtaatttatt
     2521 tatatattta aaatcatatg atacgtatga ttcttcaggc tgtcgaaatt tagtttgttt
     2581 taataatttc atattcctgt gctgagtatt tagataacaa tagacatttg aagttggaac
     2641 cagttaattt agttttcgtt gtcattgtaa aaaatgtgaa ttgtcttggt ttcgtttgaa
//
LOCUS       XR_011778636            1185 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904053), transcript variant X1, ncRNA.
ACCESSION   XR_011778636
VERSION     XR_011778636.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1185
                     /gene="LOC139904053"
                     /note="uncharacterized LOC139904053; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904053"
     ncRNA           1..1185
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904053"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904053"
ORIGIN      
        1 tgtacatgct cttttttgtt acttacgcta catatctcat aatttctctg ataaattcag
       61 tagatataat tgagagtcgt ggccttttgt atgttctgtt aggtggtttg atttgaatta
      121 ttgactgtgt ttcaaggaac tatgttgcag gcacactctt atatacaaat tcaatgacgc
      181 catcttctcg gttcccctct attagtgaat gtcaaggtac gtaggtgatc gatagttatt
      241 aagagttttt ttttgttgca acttagttgc ttatgttagg tgttatatgt agtggttgga
      301 ttatcttccg attttgggtt tccacctcgc tgtcaggtgg tcttgacgat taaaaattat
      361 tgattccaac tactgtcgtt ctaagatata tgttctcgcc taaagaaatg agggtaatgt
      421 tttaataatc ttggcttgcc tttttggtta tatttttatg ttacagcttc aaacccgttc
      481 gttaacccaa ctttattact aaatgaataa ttgtgttcga agagtatttt gtttaataag
      541 ccgagtctta cattcgaaag cttttgtgtg attgcctcat tttagtagga aggaagacaa
      601 ctcttattgt ttgctctccg tttctccttt atatacaaaa aaaaaaaaaa aatcacaatt
      661 tttttatacg cattgaataa gttgcataaa gccagtgaaa tagtaaataa tgggaaaact
      721 ttgggtattt gaagtgaatt gaatcaactt tacaggcgtg taaggtatgt gagtttactc
      781 taattctgtt acaattaata tttatatata aagcatttca tgttcatttt gcattcaaat
      841 gatatggata gttcttatgc attacagttt agtttgatag agttttggac aactttgttg
      901 atataaattg ttacaggtgg ttagatttga attggcgact gtgtttcaag gaattatgca
      961 gcacgcacac tcttatatac aaatccaaag acgccatctt ctcggttccc ctctattagt
     1021 gaatgtcaag gttgttacac gatcaatggt aggttgttac atgaagtttt gggcacatga
     1081 aacaggcact actttttggt tgatctatca cccatatgca aagttttatg tttatgggtt
     1141 ttgatataaa cttatttggc atttgtatta tttttgaaag tggaa
//
LOCUS       XR_011778637            1109 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904053), transcript variant X2, ncRNA.
ACCESSION   XR_011778637
VERSION     XR_011778637.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1109
                     /gene="LOC139904053"
                     /note="uncharacterized LOC139904053; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904053"
     ncRNA           1..1109
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904053"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904053"
ORIGIN      
        1 tgtacatgct cttttttgtt acttacgcta catatctcat aatttctctg ataaattcag
       61 tagatataat tgagagtcgt ggccttttgt atgttctgtt aggtggtttg atttgaatta
      121 ttgactgtgt ttcaaggaac tatgttgcag gcacactctt atatacaaat tcaatgacgc
      181 catcttctcg gttcccctct attagtgaat gtcaagtggt tggattatct tccgattttg
      241 ggtttccacc tcgctgtcag gtggtcttga cgattaaaaa ttattgattc caactactgt
      301 cgttctaaga tatatgttct cgcctaaaga aatgagggta atgttttaat aatcttggct
      361 tgcctttttg gttatatttt tatgttacag cttcaaaccc gttcgttaac ccaactttat
      421 tactaaatga ataattgtgt tcgaagagta ttttgtttaa taagccgagt cttacattcg
      481 aaagcttttg tgtgattgcc tcattttagt aggaaggaag acaactctta ttgtttgctc
      541 tccgtttctc ctttatatac aaaaaaaaaa aaaaaatcac aattttttta tacgcattga
      601 ataagttgca taaagccagt gaaatagtaa ataatgggaa aactttgggt atttgaagtg
      661 aattgaatca actttacagg cgtgtaaggt atgtgagttt actctaattc tgttacaatt
      721 aatatttata tataaagcat ttcatgttca ttttgcattc aaatgatatg gatagttctt
      781 atgcattaca gtttagtttg atagagtttt ggacaacttt gttgatataa attgttacag
      841 gtggttagat ttgaattggc gactgtgttt caaggaatta tgcagcacgc acactcttat
      901 atacaaatcc aaagacgcca tcttctcggt tcccctctat tagtgaatgt caaggttgtt
      961 acacgatcaa tggtaggttg ttacatgaag ttttgggcac atgaaacagg cactactttt
     1021 tggttgatct atcacccata tgcaaagttt tatgtttatg ggttttgata taaacttatt
     1081 tggcatttgt attatttttg aaagtggaa
//
LOCUS       XM_071885986            1026 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides FCS-Like Zinc finger 14-like
            (LOC139904054), mRNA.
ACCESSION   XM_071885986
VERSION     XM_071885986.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1026
                     /gene="LOC139904054"
                     /note="FCS-Like Zinc finger 14-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904054"
     CDS             261..974
                     /gene="LOC139904054"
                     /codon_start=1
                     /product="FCS-Like Zinc finger 14-like"
                     /protein_id="XP_071742087.1"
                     /db_xref="GeneID:139904054"
                     /translation="MADFKGKNTNKARLALKALPFFLSSSNSNDQNKSVKRFGEQNGV
                     VGLGIVVALNNESPGQNNTQNPVFAVSPRSDPIPIFSSKIPNIKDDVEIELLEEYTCV
                     ISHVGNNLIKKREYFDGGFMRKNGSLTTSYWVNTNGGGGGVFCAPSPPVVNGGGMMVL
                     EDVDFLSSCNLCKKKLHGLDIFMYRGEKAFCSEECRYKQISVDENKEKHASKVRKQPE
                     YVETLCSSPMQLSAGMAVA"
     misc_feature    750..872
                     /gene="LOC139904054"
                     /note="zinc-finger of the FCS-type, C2-C2; Region: zf-FLZ;
                     pfam04570"
                     /db_xref="CDD:428015"
ORIGIN      
        1 aagaagcaga ggaagagcgc aggtggcctt ctctctcaag ccatctctct ctcccactgc
       61 cttctaaact aattgatacg gagtacatac atatgtatgt acatatacat agcatataca
      121 tatacagtca aatctgttca aattctaaat tttcaaattt aaccaaaacc cattttgctt
      181 ctgatgattt gtatgtaaat tagcaattga ggaaacaaaa agattaaatc ttgataagcc
      241 ccactaaaat cttgctaaaa atggcagatt tcaagggaaa aaacactaac aaagcaagat
      301 tagcattaaa agctctacct tttttcttat cttcatcaaa ttccaatgat caaaacaaat
      361 cagttaaaag atttggtgaa caaaacggcg tcgttgggtt gggaattgtg gttgctttaa
      421 ataatgaatc accgggtcaa aataataccc agaatccggt ttttgcagtt tcaccaagat
      481 ccgacccgat ccctatattt agtagtaaaa tacccaatat taaagatgat gttgaaattg
      541 agttactgga agagtataca tgtgtgatat cacatgtggg taataattta attaagaaaa
      601 gagagtattt tgatggtggg tttatgagaa aaaatggtag tcttacaact agctattggg
      661 ttaatactaa cggtggtgga ggtggagtgt tttgtgcacc atcaccaccg gtggttaatg
      721 gtggtggaat gatggttttg gaggatgttg atttcttgag ttcttgtaat ctttgcaaga
      781 aaaagcttca tgggttggat attttcatgt acagaggtga gaaagcattt tgtagtgaag
      841 aatgtcggta caagcagatc tccgttgatg aaaacaaaga aaagcatgca tcaaaggtgc
      901 ggaaacagcc tgaatacgta gagactctat gctccagtcc tatgcagtta tctgccggga
      961 tggctgtagc atgaagtttt tcaacatatt caatatatat ttatataaca tatatatata
     1021 tatata
//
LOCUS       XM_071885987            1654 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904055), transcript variant X1, mRNA.
ACCESSION   XM_071885987
VERSION     XM_071885987.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1654
                     /gene="LOC139904055"
                     /note="uncharacterized LOC139904055; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904055"
     CDS             71..1387
                     /gene="LOC139904055"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742088.1"
                     /db_xref="GeneID:139904055"
                     /translation="MILSYRRPAAVVVELQSQICSMADKNTTNLKIPETKDYSQYNHT
                     DSCKSSRWTSRESYLFMYARPWEKVVNFYSNLVNGHTTLLDLFGTKTYHIVDDIGIEC
                     NNDETEVVTPAQKRAGRWARMNYKIVVSYHGGSFDGWQKQPGLNTVQEVIEKSLGKFV
                     DERKVGLLKDKGLPLEGHAVVAGRTDKGVTGFQQVCSFYTWREDVKPQDIKDTINSLV
                     PGKLRAISVSQVPRNFHPNFSAKWRRYLYIFPLNNGEVGEDVTICYSEKSNDQDYNFD
                     DSEVRLESAVDDDKADLQSIKKPTRFSVSKVNKLLQQLEGKLLSYKMFARDTKPSRNT
                     GPPTECFIFHARAKQVTLTIDTEKGENTEAMCIELIGNRFLRKMVRVLVATSIREAAA
                     GAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYNEFDSQSCLIF"
     misc_feature    437..1351
                     /gene="LOC139904055"
                     /note="tRNA pseudouridine(38-40) synthase TruA; Region:
                     truA; PRK00021"
                     /db_xref="CDD:234577"
     polyA_site      1654
                     /gene="LOC139904055"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatcggccca atatatcgta gtacatctca aacaccccct tcgtcaagac acgcactgcc
       61 ggagttttgg atgatattat cgtaccgacg gccggcggcg gtggttgtgg agttacaatc
      121 tcaaatttgt tcaatggctg ataaaaacac aacaaacctc aaaatccccg aaaccaaaga
      181 ttattctcag tataaccaca ctgattcttg caaatcctcc agatggactt ctagggaatc
      241 ttatctgttc atgtatgcta gaccatggga aaaagtggtc aacttttact caaatttagt
      301 caatggccac acaacattgc ttgatctgtt tggaaccaag acatatcaca ttgttgatga
      361 tattggtatt gagtgtaata atgatgaaac tgaggttgtt actccggctc aaaaacgagc
      421 tggaaggtgg gcaagaatga attacaagat agttgtgtca tatcatggtg gttcatttga
      481 tggttggcaa aagcaaccag gcttgaatac tgttcaagag gtgatcgaaa agtctcttgg
      541 gaaatttgtc gacgaaagga aagttggatt gctgaaggat aaaggtctac cacttgaagg
      601 ccatgctgta gttgccggta gaactgacaa aggggtgacg ggctttcaac aagtctgctc
      661 tttttatact tggagagagg atgttaaacc tcaagatatt aaagatacca ttaactccct
      721 agttcccgga aagcttaggg ccatatccgt gtctcaggta cctcgtaact tccatcctaa
      781 tttctccgca aaatggaggc gatatttgta tatcttccct ttgaataatg gtgaggttgg
      841 ggaagatgtc acaatttgtt atagtgaaaa atctaacgac caagattata attttgatga
      901 ttctgaggta cgtttagaat ctgcagtaga tgatgataaa gctgatctac aaagtataaa
      961 gaaaccaacg aggttcagtg ttagcaaggt taacaaactt cttcaacaac ttgaagggaa
     1021 attgttatct tataaaatgt ttgcacgtga tacaaaacct tcaagaaata ctggtcctcc
     1081 gacagagtgt tttatcttcc atgcacgagc caaacaagta actttaacca ttgatacaga
     1141 gaaaggagaa aataccgagg caatgtgcat tgaactgatt ggtaatcgct tcttacgtaa
     1201 gatggttcgt gttctagtgg cgacatcaat acgagaagcg gctgctggtg cagaagatga
     1261 tgccttgata aagctgatgg atgccacatg caggcgtgct acggctccac cagcacctcc
     1321 tgatggcctt tgtcttgttg acgttggcta taatgagttc gattcacaaa gttgtctaat
     1381 tttttaagct gcatatgatt ttcacattat gcgctcagtg gctcaccttc aacaacacag
     1441 tcctcataca tactatcatc ccgttctttt tcaaatggaa aattatgcta aagattcttg
     1501 cgagttttac ccgactaatg agaagcatat ttatctattt tttttagaat actgaattaa
     1561 tttaatgtgt atgaaaggtg cgaataggat ctcaatttca ggctacagca ttcaccattt
     1621 tatcatcttt aaaatggttc ttcatgcttc atca
//
LOCUS       XM_071885988            1567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904055), transcript variant X2, mRNA.
ACCESSION   XM_071885988
VERSION     XM_071885988.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1567
                     /gene="LOC139904055"
                     /note="uncharacterized LOC139904055; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904055"
     CDS             71..1300
                     /gene="LOC139904055"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742089.1"
                     /db_xref="GeneID:139904055"
                     /translation="MILSYRRPAAVVVELQSQICSMADKNTTNLKIPETKDYSQYNHT
                     DSCKSSRWTSRESYLFMYARPWEKVVNFYSNLVNGHTTLLDLFGTKTYHIVDDIGIEC
                     NNDETEVVTPAQKRAGRWARMNYKIVVSYHGGSFDGWQKQPGLNTVQEVIEKSLGKFV
                     DERKVGLLKDKGLPLEGHAVVAGRTDKGVTGFQQVCSFYTWREDVKPQDIKDTINSLV
                     PGKLRAISVSQVPRNFHPNFSAKWRRYLYIFPLNNESAVDDDKADLQSIKKPTRFSVS
                     KVNKLLQQLEGKLLSYKMFARDTKPSRNTGPPTECFIFHARAKQVTLTIDTEKGENTE
                     AMCIELIGNRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPDGLC
                     LVDVGYNEFDSQSCLIF"
     misc_feature    437..1264
                     /gene="LOC139904055"
                     /note="tRNA pseudouridine(38-40) synthase TruA; Region:
                     truA; PRK00021"
                     /db_xref="CDD:234577"
     polyA_site      1567
                     /gene="LOC139904055"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatcggccca atatatcgta gtacatctca aacaccccct tcgtcaagac acgcactgcc
       61 ggagttttgg atgatattat cgtaccgacg gccggcggcg gtggttgtgg agttacaatc
      121 tcaaatttgt tcaatggctg ataaaaacac aacaaacctc aaaatccccg aaaccaaaga
      181 ttattctcag tataaccaca ctgattcttg caaatcctcc agatggactt ctagggaatc
      241 ttatctgttc atgtatgcta gaccatggga aaaagtggtc aacttttact caaatttagt
      301 caatggccac acaacattgc ttgatctgtt tggaaccaag acatatcaca ttgttgatga
      361 tattggtatt gagtgtaata atgatgaaac tgaggttgtt actccggctc aaaaacgagc
      421 tggaaggtgg gcaagaatga attacaagat agttgtgtca tatcatggtg gttcatttga
      481 tggttggcaa aagcaaccag gcttgaatac tgttcaagag gtgatcgaaa agtctcttgg
      541 gaaatttgtc gacgaaagga aagttggatt gctgaaggat aaaggtctac cacttgaagg
      601 ccatgctgta gttgccggta gaactgacaa aggggtgacg ggctttcaac aagtctgctc
      661 tttttatact tggagagagg atgttaaacc tcaagatatt aaagatacca ttaactccct
      721 agttcccgga aagcttaggg ccatatccgt gtctcaggta cctcgtaact tccatcctaa
      781 tttctccgca aaatggaggc gatatttgta tatcttccct ttgaataatg aatctgcagt
      841 agatgatgat aaagctgatc tacaaagtat aaagaaacca acgaggttca gtgttagcaa
      901 ggttaacaaa cttcttcaac aacttgaagg gaaattgtta tcttataaaa tgtttgcacg
      961 tgatacaaaa ccttcaagaa atactggtcc tccgacagag tgttttatct tccatgcacg
     1021 agccaaacaa gtaactttaa ccattgatac agagaaagga gaaaataccg aggcaatgtg
     1081 cattgaactg attggtaatc gcttcttacg taagatggtt cgtgttctag tggcgacatc
     1141 aatacgagaa gcggctgctg gtgcagaaga tgatgccttg ataaagctga tggatgccac
     1201 atgcaggcgt gctacggctc caccagcacc tcctgatggc ctttgtcttg ttgacgttgg
     1261 ctataatgag ttcgattcac aaagttgtct aattttttaa gctgcatatg attttcacat
     1321 tatgcgctca gtggctcacc ttcaacaaca cagtcctcat acatactatc atcccgttct
     1381 ttttcaaatg gaaaattatg ctaaagattc ttgcgagttt tacccgacta atgagaagca
     1441 tatttatcta ttttttttag aatactgaat taatttaatg tgtatgaaag gtgcgaatag
     1501 gatctcaatt tcaggctaca gcattcacca ttttatcatc tttaaaatgg ttcttcatgc
     1561 ttcatca
//
LOCUS       XM_071885989            1558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904055), transcript variant X3, mRNA.
ACCESSION   XM_071885989
VERSION     XM_071885989.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1558
                     /gene="LOC139904055"
                     /note="uncharacterized LOC139904055; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904055"
     CDS             71..1291
                     /gene="LOC139904055"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742090.1"
                     /db_xref="GeneID:139904055"
                     /translation="MILSYRRPAAVVVELQSQICSMADKNTTNLKIPETKDYSQYNHT
                     DSCKSSRWTSRESYLFMYARPWEKVVNFYSNLVNGHTTLLDLFGTKTYHIVDDIGIEC
                     NNDETEVVTPAQKRAGRWARMNYKIVVSYHGGSFDGWQKQPGLNTVQEVIEKSLGKFV
                     DERKVGLLKDKGLPLEGHAVVAGRTDKGVTGFQQVCSFYTWREDVKPQDIKDTINSLV
                     PGKLRAISVSQVPRNFHPNFSAKWRRYLYIFPLNNVDDDKADLQSIKKPTRFSVSKVN
                     KLLQQLEGKLLSYKMFARDTKPSRNTGPPTECFIFHARAKQVTLTIDTEKGENTEAMC
                     IELIGNRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPDGLCLVD
                     VGYNEFDSQSCLIF"
     misc_feature    437..1255
                     /gene="LOC139904055"
                     /note="tRNA pseudouridine(38-40) synthase TruA; Region:
                     truA; PRK00021"
                     /db_xref="CDD:234577"
     polyA_site      1558
                     /gene="LOC139904055"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatcggccca atatatcgta gtacatctca aacaccccct tcgtcaagac acgcactgcc
       61 ggagttttgg atgatattat cgtaccgacg gccggcggcg gtggttgtgg agttacaatc
      121 tcaaatttgt tcaatggctg ataaaaacac aacaaacctc aaaatccccg aaaccaaaga
      181 ttattctcag tataaccaca ctgattcttg caaatcctcc agatggactt ctagggaatc
      241 ttatctgttc atgtatgcta gaccatggga aaaagtggtc aacttttact caaatttagt
      301 caatggccac acaacattgc ttgatctgtt tggaaccaag acatatcaca ttgttgatga
      361 tattggtatt gagtgtaata atgatgaaac tgaggttgtt actccggctc aaaaacgagc
      421 tggaaggtgg gcaagaatga attacaagat agttgtgtca tatcatggtg gttcatttga
      481 tggttggcaa aagcaaccag gcttgaatac tgttcaagag gtgatcgaaa agtctcttgg
      541 gaaatttgtc gacgaaagga aagttggatt gctgaaggat aaaggtctac cacttgaagg
      601 ccatgctgta gttgccggta gaactgacaa aggggtgacg ggctttcaac aagtctgctc
      661 tttttatact tggagagagg atgttaaacc tcaagatatt aaagatacca ttaactccct
      721 agttcccgga aagcttaggg ccatatccgt gtctcaggta cctcgtaact tccatcctaa
      781 tttctccgca aaatggaggc gatatttgta tatcttccct ttgaataatg tagatgatga
      841 taaagctgat ctacaaagta taaagaaacc aacgaggttc agtgttagca aggttaacaa
      901 acttcttcaa caacttgaag ggaaattgtt atcttataaa atgtttgcac gtgatacaaa
      961 accttcaaga aatactggtc ctccgacaga gtgttttatc ttccatgcac gagccaaaca
     1021 agtaacttta accattgata cagagaaagg agaaaatacc gaggcaatgt gcattgaact
     1081 gattggtaat cgcttcttac gtaagatggt tcgtgttcta gtggcgacat caatacgaga
     1141 agcggctgct ggtgcagaag atgatgcctt gataaagctg atggatgcca catgcaggcg
     1201 tgctacggct ccaccagcac ctcctgatgg cctttgtctt gttgacgttg gctataatga
     1261 gttcgattca caaagttgtc taatttttta agctgcatat gattttcaca ttatgcgctc
     1321 agtggctcac cttcaacaac acagtcctca tacatactat catcccgttc tttttcaaat
     1381 ggaaaattat gctaaagatt cttgcgagtt ttacccgact aatgagaagc atatttatct
     1441 atttttttta gaatactgaa ttaatttaat gtgtatgaaa ggtgcgaata ggatctcaat
     1501 ttcaggctac agcattcacc attttatcat ctttaaaatg gttcttcatg cttcatca
//
LOCUS       XM_071885990            1254 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome regulatory
            subunit RPN13 (LOC139904057), mRNA.
ACCESSION   XM_071885990
VERSION     XM_071885990.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1254
                     /gene="LOC139904057"
                     /note="26S proteasome regulatory subunit RPN13; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139904057"
     CDS             162..1073
                     /gene="LOC139904057"
                     /codon_start=1
                     /product="26S proteasome regulatory subunit RPN13"
                     /protein_id="XP_071742091.1"
                     /db_xref="GeneID:139904057"
                     /translation="MDSVDTELFPAIQDVLLEFRAGKMHLEGTRVVADPRKGLVRIGR
                     GEEGLVHIQWLNRGNDTIEDDQIVFPEEAVFEKVGQSSERVYLLKFQTDDRKCFFWMQ
                     EPIADNDEELCKSVNLYLNQPIDLPTEEEDNTLGEDISSRAGDLVGPSMGTEAMSDVS
                     SSGPVKLSDLQRILSNIGPSGEVADPDGGLGLGDILRPELLLPLMETLSLEQVASHLP
                     EGEWTPEELMELLQSPPFRQQVDSFTYVLKTGQIDLTQFGVDPSKYKFTVLSFLEALE
                     DSVAKTSSSEETISQTVDQTDRMDEDQ"
     misc_feature    210..521
                     /gene="LOC139904057"
                     /note="Pleckstrin homology-like domain of Regulatory
                     Particle Non-ATPase 13; Region: PH_Rpn13; cd13314"
                     /db_xref="CDD:270124"
     misc_feature    order(297..302,306..308,357..380,429..437,444..446)
                     /gene="LOC139904057"
                     /note="ubiquitin binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:270124"
     misc_feature    690..986
                     /gene="LOC139904057"
                     /note="UCH-binding domain; Region: RPN13_C; pfam16550"
                     /db_xref="CDD:465170"
     polyA_site      1254
                     /gene="LOC139904057"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataatcgcaa taaccctact tcgtcaccgt attcataata tttccccaag ccttggcaca
       61 cgcatcgcgt aaatcgtcat ctcagaacga tatacacact tctgaacttg agccaactat
      121 aattacacaa atagttaata gcttaatata cagttggact tatggattct gtagatacag
      181 agctttttcc tgctattcag gacgttctgc tggagtttcg tgctggcaaa atgcatttgg
      241 aaggaacacg tgttgttgct gatcctcgta aagggcttgt tcgcattgga agaggtgagg
      301 agggactagt tcatattcag tggctgaatc ggggtaatga cacgattgaa gatgatcaga
      361 ttgttttccc tgaagaggcc gtttttgaaa aggtcggtca atcttctgaa agggtttact
      421 tattaaagtt tcagacagac gatcggaagt gtttcttctg gatgcaggag cccatagctg
      481 acaacgatga agaattatgc aagtctgtca acctctacct gaatcaacca atagatttac
      541 ctactgaaga agaagacaac acgctcggtg aagatatctc atcacgggct ggagatttgg
      601 ttggaccaag tatgggcacc gaagcaatga gtgatgtttc gtcttcagga cctgttaaat
      661 tgtctgatct gcagagaatc ttgagtaata ttggaccctc aggtgaggtc gcagatcctg
      721 atggaggttt aggattgggt gatatcttga ggcctgagct tctgttacca ttgatggaga
      781 cattgtcact ggagcaagta gcatcccatt tacctgaggg tgaatggact ccggaggaat
      841 taatggagtt gctgcaaagc cctccttttc gtcaacaagt tgattctttt acttacgtgc
      901 tgaagactgg tcaaatagat ctgactcaat ttggagttga cccaagtaaa tacaagttca
      961 ctgtcttatc ttttcttgag gcccttgaag attctgttgc caaaacatca agttccgagg
     1021 agactatatc tcagactgtt gatcaaactg atcgaatgga tgaagatcaa taaaactaag
     1081 cagttttgca caacaaaaaa ctgatttcaa cagtttgttt tattgacagt gagaaattac
     1141 atcacagatt gtggatactg taagcccttt tgaatttata ttcgtcatgt acacaacatt
     1201 agtgataatt tcagtgattt aaattttaaa tgtactcatt tgtctttggt ttta
//
LOCUS       XM_071885992            1913 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pectinesterase-like
            (LOC139904058), mRNA.
ACCESSION   XM_071885992
VERSION     XM_071885992.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1913
                     /gene="LOC139904058"
                     /note="pectinesterase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 72
                     Proteins"
                     /db_xref="GeneID:139904058"
     CDS             20..1774
                     /gene="LOC139904058"
                     /codon_start=1
                     /product="pectinesterase-like"
                     /protein_id="XP_071742093.1"
                     /db_xref="GeneID:139904058"
                     /translation="MSSSSWVFVTSLLIVVTTTSQLLLAGVHGISSRSSSNPLHSICS
                     TTLYPDICYSTLTTADVDAAAAAAANTSSLSTQKHLIQVTLNKTKEIIQANIFTINNF
                     LTGRTTTTPIMITNRTKIALHDCLHLGAETIRRLDMVIQHLTDYHPTPNYYYNKKKKS
                     SDPLIIINNLKTFMSTTITNKETCLDGFTHDAPSKRLLRKSIKNGQDYGGKMCSNVLA
                     MISNIITQDDVEYETNINNKINMDEQQKLVVIRMWPEWLSAGDRKLLQSETVTPNVTV
                     ATDGSGDYTTVGAAVAAAPSKSVNRYVIKIAAGVYRENVAIPSSKTNIMFIGDGRSNT
                     IITASESVAGGNSTFDSATVAAVGDGFLARDITFQNAAGPAGEQAVALRVGSDLSAFY
                     RCGMLAYQDTLYVHSNRQFYVNCMIVGTVDFIFGNAAVVFQNCDIQARLPGPKQKNMV
                     TAQGRTDPNQNTGIVIQKCRISGTSDLLPVIATYPTYLGRPWKEYSRTVVMQSTISDV
                     INPAGWYPWDGDFALNTLYYREYQNTGPGADTSNRVTWPGWGVITNTTEAQSFTAGSF
                     IDGGSWLQSTGFPYSLGL"
     misc_feature    53..1771
                     /gene="LOC139904058"
                     /note="Pectinesterase/pectinesterase inhibitor; Region:
                     PLN02313"
                     /db_xref="CDD:177947"
ORIGIN      
        1 tactgaatag catcacaaaa tgtccagctc ttcgtgggtt tttgtgacta gtttactaat
       61 agttgtaact actacttccc agcttctgct tgcaggtgtc catggaatta gtagtcgtag
      121 tagtagtaat ccactacact caatatgtag tacaaccttg tacccggaca tatgctactc
      181 caccttaacc accgcagatg ttgatgctgc tgctgctgct gctgctaata ctagtagtct
      241 ctcaactcaa aaacatttaa tccaagttac cctcaataaa actaaagaga tcattcaagc
      301 caatatcttc accataaaca acttcctcac gggaagaact actaccaccc ccatcatgat
      361 caccaaccgc accaaaatag ctctccatga ttgccttcac ttgggagctg aaaccatacg
      421 aagattggac atggtcatcc aacaccttac agactaccat ccaacaccca attactacta
      481 taataaaaag aagaaatcat cagatccact aattataatc aacaacctta aaaccttcat
      541 gagcactacc atcaccaaca aagaaacctg cttggatggc tttactcatg atgcaccaag
      601 taagcggttg ctgagaaaat caattaaaaa tggtcaggat tacggtggaa agatgtgtag
      661 caatgtcctt gctatgatta gcaacatcat cacacaagat gatgttgagt atgagactaa
      721 tattaataat aaaattaaca tggatgagca gcagaaatta gttgtgatca ggatgtggcc
      781 cgagtggttg tctgcaggag acaggaagct gttgcagtcg gagacggtaa ctccaaacgt
      841 gactgtggcg acagatggta gcggagatta cacgacggtt ggggcagctg tggctgcagc
      901 accatccaaa agtgtaaaca ggtatgtgat taagatagca gcaggggtgt acagagagaa
      961 tgttgcaatt ccaagtagca aaacaaatat tatgtttata ggggacggaa gaagtaacac
     1021 tattattact gccagtgaga gtgtggccgg cggtaactcc accttcgact ctgctaccgt
     1081 agcggcggtt ggtgatggat ttttggcacg agatattaca tttcaaaatg cagcaggacc
     1141 ggctggtgaa caagcagttg cattacgtgt tggttctgat ttgtctgcat tttatagatg
     1201 tggtatgtta gcctaccaag ataccctgta cgtccattct aatcgtcagt tctacgttaa
     1261 ctgcatgatt gttggcaccg tcgatttcat atttgggaat gcagctgtag tgttccaaaa
     1321 ctgtgacatc caggcccgtc ttccagggcc caaacaaaag aacatggtta ctgctcaagg
     1381 gaggaccgat ccaaaccaga atactggcat tgtgattcaa aagtgcagaa taagtgggac
     1441 ttctgaccta ctaccagtta tagctacgta tccaacatat cttggaagac catggaaaga
     1501 atattcaaga acagtggtaa tgcaatcgac aatcagtgat gtgataaacc ctgcaggatg
     1561 gtacccttgg gatggtgatt ttgctctaaa caccttgtat tacagagagt accaaaacac
     1621 tgggcctggg gctgatacat caaatagggt cacatggcca ggttggggag tcattacaaa
     1681 tactaccgag gcacagagtt ttactgcagg atccttcatt gatggaggta gttggttaca
     1741 atccactggc tttccttact cccttggttt gtagtaataa tctttaaata ttactcgatc
     1801 aatttgttat ttaataaata atttctagct acctggtgtg ctagctagct aggacatcat
     1861 gtcacatcgt cgttcttata tatgttcgtg attttgttaa aatacaatgt atc
//
LOCUS       XR_011778638            1107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904059), transcript variant X1, ncRNA.
ACCESSION   XR_011778638
VERSION     XR_011778638.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1107
                     /gene="LOC139904059"
                     /note="uncharacterized LOC139904059; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904059"
     ncRNA           1..1107
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904059"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904059"
ORIGIN      
        1 gcgcttaatc agtccaagct gtcacaaacc ttacgttcat acccaaaacc agcctctctt
       61 ctcaaactaa attcacacaa gtttaatcac agttatcccc aattgatcaa caaataatct
      121 acgtagacat ctcagatcgt gtagccaaaa tcacgcagaa gtattcccaa gactttcatc
      181 ttcttcagcg catctgcgat ccatctacta ccaaacccta atatattaat tgattcaacg
      241 ttttaatata tggttatatg aattgtggta aatcagatgc gattgatata accaaaaaac
      301 caagccctgt tagaagatta tctctcttcg atcagacaat tcaatcatcc ttactgtcaa
      361 aacaaatatg gatatgcatt tttctatcga attcatcttt cttgagcaaa agcaagcgac
      421 gattatcaac cacttcatag tggtacgtca ttattattag ggtttatgct acatatttta
      481 tttgtttaca gtaattgata catgaaatta gggccaaatt tacaagctta tggtttaatt
      541 gcttagtagc ttttacaaga tattatttat atgtaaccgt caactgattt tgttaccgtc
      601 tgaaagcatc tgagtttgga aggtgctttg cctatgtttc tggaggttga tagcacagtc
      661 acaaacatgt ttccaactgg tatacaaaga aaagttacta aagtttacgt tgggctgcgg
      721 aagtgacacc tctcatcttt ctctattggg ttataaccct cgagtgtatt acaatggtcg
      781 agacactttt gaatcgatgg gcgctgatcg gatatggcac caggggatat tactttcaaa
      841 agcagttacc agcagaagag ccaatcagca ttttgaagaa gaatggccca tgcatcttat
      901 atgcaatact tgataaaatg aaggtaccat cttttatgag tatgaagtaa gagtcggata
      961 tgatgtaaac aacatgttaa tgaagatacc tctaaactta taagctttaa aaaatatata
     1021 atatgttgaa attatcctta gacagattct aaaatacgca gtgttgatga tgatgtcgat
     1081 ttataaattt cttattcttt cttagat
//
LOCUS       XR_011778639            1183 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904059), transcript variant X2, ncRNA.
ACCESSION   XR_011778639
VERSION     XR_011778639.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1183
                     /gene="LOC139904059"
                     /note="uncharacterized LOC139904059; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904059"
     ncRNA           1..1183
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904059"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904059"
ORIGIN      
        1 gcgcttaatc agtccaagct gtcacaaacc ttacgttcat acccaaaacc agcctctctt
       61 ctcaaactaa attcacacaa gtttaatcac agttatcccc aattgatcaa caaataatct
      121 acgtagacat ctcagatcgt gtagccaaaa tcacgcagaa gtattcccaa gactttcatc
      181 ttcttcagcg catctgcgat ccatctacta ccaaacccta atatattaat tgattcaacg
      241 ttttaatata tggttatatg aattgtggta aatcagatgc gattgatata accaaaaaac
      301 caagccctgt tagaagatta tctctcttcg atcagacaat tcaatcatcc ttactgtcaa
      361 aacaaatatg gatatgcatt tttctatcga attcatcttt cttgagcaaa agcaagcgac
      421 gattatcaac cacttcatag tggtacgtca ttattattag ggtttatgct acatatttta
      481 tttgtttaca gtaattgata catgaaatta gggccaaatt tacaagctta tggtttaatt
      541 gcttagtagc ttttacaaga tattatttat atgtaaccgt caactgattt tgttaccgtc
      601 tgaaagcatc tgagtttgga aggtgctttg cctatgtttc tggaggttga tagcacagtc
      661 acaaacatgt ttccaactgg tatacaaaga aaagttacta aagtttacgt tgggctgcgg
      721 aagtgacacc tctcatcttt ctctattggg ttataaccct cgagtgtatt acaatggtcg
      781 agacactttt gaatcgatgg gcgctgatcg gatatggcac caggggatat tactttcaaa
      841 aatatgaaga acatgtaata ttttccaatt tggttagctt atcagtcgaa ttttgcaacc
      901 ctggatgatt atacagagca gttaccagca gaagagccaa tcagcatttt gaagaagaat
      961 ggcccatgca tcttatatgc aatacttgat aaaatgaagg taccatcttt tatgagtatg
     1021 aagtaagagt cggatatgat gtaaacaaca tgttaatgaa gatacctcta aacttataag
     1081 ctttaaaaaa tatataatat gttgaaatta tccttagaca gattctaaaa tacgcagtgt
     1141 tgatgatgat gtcgatttat aaatttctta ttctttctta gat
//
LOCUS       XM_071885993            2200 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides YTH domain-containing
            protein ECT2-like (LOC139904060), transcript variant X1, mRNA.
ACCESSION   XM_071885993
VERSION     XM_071885993.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2200
                     /gene="LOC139904060"
                     /note="YTH domain-containing protein ECT2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139904060"
     CDS             44..1843
                     /gene="LOC139904060"
                     /codon_start=1
                     /product="YTH domain-containing protein ECT2-like isoform
                     X1"
                     /protein_id="XP_071742094.1"
                     /db_xref="GeneID:139904060"
                     /translation="MEEKGQQGKDRVSPASISALPLHVVGDGLVPDNYMDKPLSPKNE
                     RIVSPNPSPDAAIAGSLNASGVQTPINSSNIFSPPEQTYFYGASGYDDGSANWGDYSS
                     YVNNLQIVPPGMYNDNSSLLFHPAYGFDTQMAYGQFSPIASPMSPIMIDGQLFSPHQV
                     PMSPNYYSQPVSPQVTSAFPTDLATSANSGQEFTADNVFMGPGSGYYLQYGSFGGANP
                     AGNNNNLGFYKYPAEITSGDSVPNRSMSSDTSSFASPLTSGALYPAPVGILGSYDHIF
                     GQIPQQQTAYGYGSVSGSSTRRYPQSGSFRGYNSYGSNSVFHGEASHLNRFVPDKAGK
                     LRDNAISMISEPHGTTSDRNRGPRALKPKGNGVAGDGNDLASRLDIELYNRPDFVTTY
                     DNAKFFVIKSFSEDNVHKSIKYSVWASTPLGNRKLDAAYQESKEANTDCPIFLFFSVN
                     ASGQFCGVAEMVGPVDFVNDAEYWQQDRWSGQFKVKWHIIKDVPNSRFRHILLENNDN
                     KPVTHSRDSQEVKLEVGNAMLKIFKDHDADTSIIDDFIYYDEREKDLQEKRSKERELT
                     KSTSAAVNDTTTITQLADKVAESLHVDEHREVQ"
     misc_feature    1226..1642
                     /gene="LOC139904060"
                     /note="YT521-B-like domain; Region: YTH; pfam04146"
                     /db_xref="CDD:461195"
     polyA_site      2200
                     /gene="LOC139904060"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gggagaagtt tcacaggcaa acacgcacaa aaatcaaata attatggaag aaaaaggtca
       61 acagggaaaa gatcgagtct cacctgcttc aatttctgct ttgcctttgc atgttgtagg
      121 tgatgggctt gtgcctgaca actacatgga taagccgctt tctcccaaaa acgaaaggat
      181 tgtttctccg aatccgtctc cggatgcagc cattgctggg tccttgaatg caagtggagt
      241 tcagacccct ataaattcat caaatatttt ttctcctcca gagcagacct acttttacgg
      301 agcatcaggt tatgatgatg gctctgccaa ctggggagac tattcaagct acgtaaataa
      361 tttgcaaatt gtgcctccgg gaatgtacaa tgataattca tcactattgt tccaccctgc
      421 atatgggttt gacacccaga tggcatatgg ccagttttct ccaattgcca gtcctatgtc
      481 tccaataatg atagacgggc agctgttttc accacatcaa gttccgatgt ctcctaatta
      541 ctactcacag cctgtttctc ctcaagttac atctgctttt ccaaccgatc ttgcaacatc
      601 tgcaaacagt ggccaagagt ttactgctga taacgttttt atggggcctg gatcaggtta
      661 ttatttgcaa tatggttctt tcggtggagc caatcctgct ggaaacaata ataatcttgg
      721 gttctataaa tatccggcgg agatcacgtc aggtgattct gtaccaaata gatcaatgtc
      781 ctcagacaca agtagctttg catctccact cacatcagga gccttatacc ctgcacccgt
      841 tggaatactt gggtcgtatg atcacatctt tggccagatt ccacagcaac agacagcata
      901 tggttatggg tcagtatctg gttcctccac aagacgctac cctcaaagtg gatcttttcg
      961 agggtataat agctacggca gtaattctgt ttttcatggg gaagctagtc acctgaatcg
     1021 ttttgtgccc gacaaagcgg gaaaactcag ggacaatgcc attagcatga ttagtgaacc
     1081 acatggtact accagtgatc gtaacagagg accaagggca ttaaagccaa agggaaatgg
     1141 tgttgctgga gatggtaatg accttgcttc taggcttgat attgaacttt acaatcgacc
     1201 tgattttgtt acaacctatg acaacgcgaa attctttgta attaagtctt ttagtgaaga
     1261 caacgtccat aaaagtatta agtacagtgt ttgggccagt accccattgg gtaacagaaa
     1321 attagatgct gcttatcaag aatcaaagga agccaacacc gactgtccaa tctttctatt
     1381 cttttctgtt aatgccagtg gacagttttg tggcgtggct gaaatggttg gaccggtgga
     1441 ttttgtgaat gatgctgaat attggcagca ggataggtgg agtggtcaat ttaaagtcaa
     1501 atggcacatc atcaaggatg tccccaacag tcgatttcgg catattcttc ttgaaaataa
     1561 tgacaacaag cctgtcactc atagcagaga ttcacaagag gtgaaactag aagtgggtaa
     1621 tgcaatgttg aaaatcttta aagatcatga tgcagataca tctattatag atgattttat
     1681 atattatgat gagcgagaga aggatttaca ggaaaagaga tccaaggagc gagaattaac
     1741 aaaaagcact tcggctgctg tgaatgatac tactacaata actcaacttg ctgataaagt
     1801 tgcagagtcc cttcatgtgg atgagcatag ggaagtacag taaagtttta gtaccaaaat
     1861 cgaatatgtg aagccttctg catattgttt gcgtagacat taacccctgg atattgttgc
     1921 cttgaagtta catgtaatct tttggtgtat gggggtcgca actgacatca gtttctgagg
     1981 tggtttgcag acttttaggc cgcataaaac cgctcatttt agtaaaaaaa aaaattattg
     2041 gttattttca gtattccaga aaaggtccta gtatgggagt taactgtttg actttgtgca
     2101 acctccttgt ttcttcaccc cttcttgttt ctaaaggtag gtggtgacag ttgaggctgt
     2161 acgtgaagct gtttatcata gtttttgttt gtttgttgca
//
LOCUS       XM_071885994            2389 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides YTH domain-containing
            protein ECT2-like (LOC139904060), transcript variant X2, mRNA.
ACCESSION   XM_071885994
VERSION     XM_071885994.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2389
                     /gene="LOC139904060"
                     /note="YTH domain-containing protein ECT2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139904060"
     CDS             236..2032
                     /gene="LOC139904060"
                     /codon_start=1
                     /product="YTH domain-containing protein ECT2-like isoform
                     X2"
                     /protein_id="XP_071742095.1"
                     /db_xref="GeneID:139904060"
                     /translation="MEEKGQQGKDRVSPASISALPLHVGDGLVPDNYMDKPLSPKNER
                     IVSPNPSPDAAIAGSLNASGVQTPINSSNIFSPPEQTYFYGASGYDDGSANWGDYSSY
                     VNNLQIVPPGMYNDNSSLLFHPAYGFDTQMAYGQFSPIASPMSPIMIDGQLFSPHQVP
                     MSPNYYSQPVSPQVTSAFPTDLATSANSGQEFTADNVFMGPGSGYYLQYGSFGGANPA
                     GNNNNLGFYKYPAEITSGDSVPNRSMSSDTSSFASPLTSGALYPAPVGILGSYDHIFG
                     QIPQQQTAYGYGSVSGSSTRRYPQSGSFRGYNSYGSNSVFHGEASHLNRFVPDKAGKL
                     RDNAISMISEPHGTTSDRNRGPRALKPKGNGVAGDGNDLASRLDIELYNRPDFVTTYD
                     NAKFFVIKSFSEDNVHKSIKYSVWASTPLGNRKLDAAYQESKEANTDCPIFLFFSVNA
                     SGQFCGVAEMVGPVDFVNDAEYWQQDRWSGQFKVKWHIIKDVPNSRFRHILLENNDNK
                     PVTHSRDSQEVKLEVGNAMLKIFKDHDADTSIIDDFIYYDEREKDLQEKRSKERELTK
                     STSAAVNDTTTITQLADKVAESLHVDEHREVQ"
     misc_feature    1415..1831
                     /gene="LOC139904060"
                     /note="YT521-B-like domain; Region: YTH; pfam04146"
                     /db_xref="CDD:461195"
     polyA_site      2389
                     /gene="LOC139904060"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatctatcta tctatatata agacctaaaa ccctgtcgat ttaattctgc ctcgatcttc
       61 aataacaata atttattatc tactgattga tcatgatgat ataaagaatt cgaattcgaa
      121 ttcgattctt caaccataaa taattccgat tttttttcta taaatttaat attaatatag
      181 atatagattt gatttaaagc gtttaattgc taatcatatc agaaatcaaa taattatgga
      241 agaaaaaggt caacagggaa aagatcgagt ctcacctgct tcaatttctg ctttgccttt
      301 gcatgttggt gatgggcttg tgcctgacaa ctacatggat aagccgcttt ctcccaaaaa
      361 cgaaaggatt gtttctccga atccgtctcc ggatgcagcc attgctgggt ccttgaatgc
      421 aagtggagtt cagaccccta taaattcatc aaatattttt tctcctccag agcagaccta
      481 cttttacgga gcatcaggtt atgatgatgg ctctgccaac tggggagact attcaagcta
      541 cgtaaataat ttgcaaattg tgcctccggg aatgtacaat gataattcat cactattgtt
      601 ccaccctgca tatgggtttg acacccagat ggcatatggc cagttttctc caattgccag
      661 tcctatgtct ccaataatga tagacgggca gctgttttca ccacatcaag ttccgatgtc
      721 tcctaattac tactcacagc ctgtttctcc tcaagttaca tctgcttttc caaccgatct
      781 tgcaacatct gcaaacagtg gccaagagtt tactgctgat aacgttttta tggggcctgg
      841 atcaggttat tatttgcaat atggttcttt cggtggagcc aatcctgctg gaaacaataa
      901 taatcttggg ttctataaat atccggcgga gatcacgtca ggtgattctg taccaaatag
      961 atcaatgtcc tcagacacaa gtagctttgc atctccactc acatcaggag ccttataccc
     1021 tgcacccgtt ggaatacttg ggtcgtatga tcacatcttt ggccagattc cacagcaaca
     1081 gacagcatat ggttatgggt cagtatctgg ttcctccaca agacgctacc ctcaaagtgg
     1141 atcttttcga gggtataata gctacggcag taattctgtt tttcatgggg aagctagtca
     1201 cctgaatcgt tttgtgcccg acaaagcggg aaaactcagg gacaatgcca ttagcatgat
     1261 tagtgaacca catggtacta ccagtgatcg taacagagga ccaagggcat taaagccaaa
     1321 gggaaatggt gttgctggag atggtaatga ccttgcttct aggcttgata ttgaacttta
     1381 caatcgacct gattttgtta caacctatga caacgcgaaa ttctttgtaa ttaagtcttt
     1441 tagtgaagac aacgtccata aaagtattaa gtacagtgtt tgggccagta ccccattggg
     1501 taacagaaaa ttagatgctg cttatcaaga atcaaaggaa gccaacaccg actgtccaat
     1561 ctttctattc ttttctgtta atgccagtgg acagttttgt ggcgtggctg aaatggttgg
     1621 accggtggat tttgtgaatg atgctgaata ttggcagcag gataggtgga gtggtcaatt
     1681 taaagtcaaa tggcacatca tcaaggatgt ccccaacagt cgatttcggc atattcttct
     1741 tgaaaataat gacaacaagc ctgtcactca tagcagagat tcacaagagg tgaaactaga
     1801 agtgggtaat gcaatgttga aaatctttaa agatcatgat gcagatacat ctattataga
     1861 tgattttata tattatgatg agcgagagaa ggatttacag gaaaagagat ccaaggagcg
     1921 agaattaaca aaaagcactt cggctgctgt gaatgatact actacaataa ctcaacttgc
     1981 tgataaagtt gcagagtccc ttcatgtgga tgagcatagg gaagtacagt aaagttttag
     2041 taccaaaatc gaatatgtga agccttctgc atattgtttg cgtagacatt aacccctgga
     2101 tattgttgcc ttgaagttac atgtaatctt ttggtgtatg ggggtcgcaa ctgacatcag
     2161 tttctgaggt ggtttgcaga cttttaggcc gcataaaacc gctcatttta gtaaaaaaaa
     2221 aaattattgg ttattttcag tattccagaa aaggtcctag tatgggagtt aactgtttga
     2281 ctttgtgcaa cctccttgtt tcttcacccc ttcttgtttc taaaggtagg tggtgacagt
     2341 tgaggctgta cgtgaagctg tttatcatag tttttgtttg tttgttgca
//
LOCUS       XM_071885995            2338 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904061), transcript variant X1, mRNA.
ACCESSION   XM_071885995
VERSION     XM_071885995.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2338
                     /gene="LOC139904061"
                     /note="uncharacterized LOC139904061; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904061"
     CDS             300..2084
                     /gene="LOC139904061"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742096.1"
                     /db_xref="GeneID:139904061"
                     /translation="MDVLCATVNCLLLGISHKRKTIRYGNRSSINFRVQAVHSDQVGA
                     VSDDKPESLSGLRSKNVEWPSPSDEIPFWKRNFQNRDANREVTVDIEKDSDLLHVIHV
                     TAEMAPIAKVGGLGDVVTGLARACLLRGHKVDIMLPFYECIRKENIQELSLMSTYDSY
                     YDGNWIKTNAYSGIVSDIPVILVEPMNQFFKGEDVYGGSYNELEAYLFFSRACLEWMQ
                     VTGTQPDIIHVHEWQTGALPLLYWDMYHHLSLQKPRIVLTIHNMEHYGECRQEQLQKC
                     GLDGSLYATIDKAIDDRTIGHNPERLSLLKGGIVYSNSVVTVSPTYLKETLCSGWLAS
                     ALITHRDKYYGILNGIDTVMWNPDSDVFLPANYNAQNTAGKEICKQYLQRGLGLAIEG
                     SVSSNHLSNRVPLVVCISRLVAQKGLHLIRHAISHVKEHGGQMIVLGKALDGRVQKEF
                     EALADSHNKGSAVRILLMYSEELSHMLYAAADMVLVPSVYEPCGLAQMIGMRYGSIPI
                     VRKTGGLADTVFDMDDHSQPEIANGFVFEGIDEGSLSLALDRAFSYYQEKPIEWANLV
                     EKVMQIDNSWNRTAGTYIDLYNLIRVRW"
     misc_feature    591..2060
                     /gene="LOC139904061"
                     /note="Glycogen synthase GlgA and similar proteins;
                     Region: GT5_Glycogen_synthase_DULL1-like; cd03791"
                     /db_xref="CDD:340822"
     misc_feature    order(630..632,639..641,1524..1532,1701..1706,1719..1721,
                     1770..1772,1785..1787)
                     /gene="LOC139904061"
                     /note="ADP-binding pocket [chemical binding]; other site"
                     /db_xref="CDD:340822"
     misc_feature    order(1269..1271,1830..1832,1845..1850,1854..1856,
                     1935..1937)
                     /gene="LOC139904061"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340822"
ORIGIN      
        1 cgtacaactt tcaatgcata gaattgtatc gtgtcacatg tttagatatt tacatgatat
       61 cggaatatgt gtctggaact tgaagaagga ataatgctcg aatctcgagt gaaggttacc
      121 aaaatccctg aaagcgttgt cttgcaacaa ttacgttatt tcaatctcat tcaatgacgt
      181 aatctccact gtgtatattc atttcgtgtt acagaattca tgattaattc gatttcattg
      241 tgagaagaag gagatataga ttattattat ttttataaaa ataaaatttt atatcaacaa
      301 tggatgtatt gtgtgctacc gttaattgtt tacttttagg tatctcacac aagaggaaaa
      361 cgattagata cgggaatcga tcttcaatca atttcagagt tcaagcagtt cattcggatc
      421 aggtaggtgc tgtgagtgat gacaagccag aatcgttaag tggtttgaga tcaaaaaatg
      481 tcgaatggcc ttctccaagt gatgaaatcc ctttttggaa gagaaatttc cagaatcggg
      541 atgctaatag agaggttacc gttgacatcg agaaagattc tgatcttttg catgtgattc
      601 atgtgactgc tgaaatggcg ccaatagcaa aagttggtgg tcttggtgat gtggtaacag
      661 gcctagctcg tgcatgttta ttacgtggac ataaagtgga tatcatgctt cctttctatg
      721 agtgtatccg gaaggaaaac atccaagaat tatcactaat gtccacttat gattcatatt
      781 atgatgggaa ctggatcaaa actaatgcat atagcggaat agtttcagac attccggtta
      841 tacttgttga accaatgaac cagtttttta aaggagaaga tgtatatgga ggttcataca
      901 atgagttgga ggcttattta tttttcagcc gtgcttgcct tgaatggatg caggtaactg
      961 gaacacaacc tgatatcata catgtccatg aatggcagac aggggcactg ccacttctct
     1021 actgggacat gtatcatcat ctttcacttc agaaaccaag aatagtattg acgatccaca
     1081 acatggagca ttatggggaa tgcagacaag aacaacttca aaagtgtggt cttgatggat
     1141 ctttatatgc aactatcgac aaggcgattg atgatcgaac cattgggcac aatcctgaga
     1201 ggctgagttt attaaaagga ggcattgtat acagcaattc agtcgttaca gtctctccaa
     1261 cttaccttaa agaaacactt tgttctggat ggcttgcaag tgctttgata acacatcggg
     1321 acaagtacta tggtattcta aatggaattg atacggtaat gtggaaccct gattctgatg
     1381 ttttcttgcc tgccaactat aatgctcaga acactgctgg aaaggaaata tgcaagcagt
     1441 atcttcaacg ggggctcggt ttggctatag aaggcagtgt atctagtaac cacttatcta
     1501 atagggtacc tttagttgtt tgcatttcta gattagttgc tcagaaaggg cttcatctaa
     1561 tcagacatgc gatcagtcat gttaaagaac atggtggaca aatgattgtg ctgggaaaag
     1621 ctctggatgg tagggttcaa aaggaatttg aagctctagc agattcgcat aacaaaggtt
     1681 ctgcagtccg catcctcttg atgtacagtg aggagttgtc tcacatgttg tatgccgctg
     1741 ctgacatggt gttggttcct tctgtatatg agccttgtgg acttgcacag atgataggaa
     1801 tgcgttacgg atcgatacca atagtaagaa agactggtgg tcttgccgac actgtttttg
     1861 atatggatga tcattcacaa cctgagatag caaacgggtt cgtctttgaa ggaattgatg
     1921 aaggttccct tagtttggct cttgatcgtg cattctcgta ctaccaggaa aaaccaatcg
     1981 agtgggcgaa tctcgtagaa aaagtcatgc aaattgacaa cagctggaat agaacggctg
     2041 ggacgtatat tgatttgtac aacttgataa gagtgagatg gtgacttctt gaacacatct
     2101 tagttttgta agtgataaac tgagaactca aatcgtatta aagttaaaca tgtgcaatta
     2161 gataattaga tcattcctat catcaaataa gccaagaacc aaggaacact gtgattgccc
     2221 ggttctctga gcattgggta tcgttgttgt atactgtcat cttctaacat tgccctaata
     2281 atttgcatat taattgatct ccttcacaca tggtcaacga tttccatgta taaaaaca
//
LOCUS       XM_071885996            2286 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904061), transcript variant X2, mRNA.
ACCESSION   XM_071885996
VERSION     XM_071885996.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2286
                     /gene="LOC139904061"
                     /note="uncharacterized LOC139904061; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904061"
     CDS             301..2031
                     /gene="LOC139904061"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742097.1"
                     /db_xref="GeneID:139904061"
                     /translation="MDVLCATVNCLLLGISHKRKTIRYGNRSSINFRVQAVHSDQVGA
                     VSDDKPESLSGLRSKNVEWPSPSDEIPFWKRNFQNRDANREVTVDIEKDSDLLHVIHV
                     TAEMAPIAKVGGLGDVVTGLARACLLRGHKVDIMLPFYECIRKENIQELSLMSTYDSY
                     YDGNWIKTNAYSGIVSDIPVILVEPMNQFFKGEDVYGGSYNELEAYLFFSRACLEWMQ
                     VTGTQPDIIHVHEWQTGALPLLYWDMYHHLSLQKPRIVLTIHNMEHYGECRQEQLQKC
                     GLDGSLYATIDKAIDDRTIGHNPERLSLLKGGIVYSNSVVTVSPTYLKETLCSGWLAS
                     ALITHRDKYYGILNGIDTNTAGKEICKQYLQRGLGLAIEGSVSSNHLSNRVPLVVCIS
                     RLVAQKGLHLIRHAISHVKEHGGQMIVLGKALDGRVQKEFEALADSHNKGSAVRILLM
                     YSEELSHMLYAAADMVLVPSVYEPCGLAQMIGMRYGSIPIVRKTGGLADTVFDMDDHS
                     QPEIANGFVFEGIDEGSLSLALDRAFSYYQEKPIEWANLVEKVMQIDNSWNRTAGTYI
                     DLYNLIRVRW"
     misc_feature    592..2007
                     /gene="LOC139904061"
                     /note="Glycogen synthase GlgA and similar proteins;
                     Region: GT5_Glycogen_synthase_DULL1-like; cd03791"
                     /db_xref="CDD:340822"
     misc_feature    order(631..633,640..642,1471..1479,1648..1653,1666..1668,
                     1717..1719,1732..1734)
                     /gene="LOC139904061"
                     /note="ADP-binding pocket [chemical binding]; other site"
                     /db_xref="CDD:340822"
     misc_feature    order(1270..1272,1777..1779,1792..1797,1801..1803,
                     1882..1884)
                     /gene="LOC139904061"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340822"
ORIGIN      
        1 ccgtacaact ttcaatgcat agaattgtat cgtgtcacat gtttagatat ttacatgata
       61 tcggaatatg tgtctggaac ttgaagaagg aataatgctc gaatctcgag tgaaggttac
      121 caaaatccct gaaagcgttg tcttgcaaca attacgttat ttcaatctca ttcaatgacg
      181 taatctccac tgtgtatatt catttcgtgt tacagaattc atgattaatt cgatttcatt
      241 gtgagaagaa ggagatatag attattatta tttttataaa aataaaattt tatatcaaca
      301 atggatgtat tgtgtgctac cgttaattgt ttacttttag gtatctcaca caagaggaaa
      361 acgattagat acgggaatcg atcttcaatc aatttcagag ttcaagcagt tcattcggat
      421 caggtaggtg ctgtgagtga tgacaagcca gaatcgttaa gtggtttgag atcaaaaaat
      481 gtcgaatggc cttctccaag tgatgaaatc cctttttgga agagaaattt ccagaatcgg
      541 gatgctaata gagaggttac cgttgacatc gagaaagatt ctgatctttt gcatgtgatt
      601 catgtgactg ctgaaatggc gccaatagca aaagttggtg gtcttggtga tgtggtaaca
      661 ggcctagctc gtgcatgttt attacgtgga cataaagtgg atatcatgct tcctttctat
      721 gagtgtatcc ggaaggaaaa catccaagaa ttatcactaa tgtccactta tgattcatat
      781 tatgatggga actggatcaa aactaatgca tatagcggaa tagtttcaga cattccggtt
      841 atacttgttg aaccaatgaa ccagtttttt aaaggagaag atgtatatgg aggttcatac
      901 aatgagttgg aggcttattt atttttcagc cgtgcttgcc ttgaatggat gcaggtaact
      961 ggaacacaac ctgatatcat acatgtccat gaatggcaga caggggcact gccacttctc
     1021 tactgggaca tgtatcatca tctttcactt cagaaaccaa gaatagtatt gacgatccac
     1081 aacatggagc attatgggga atgcagacaa gaacaacttc aaaagtgtgg tcttgatgga
     1141 tctttatatg caactatcga caaggcgatt gatgatcgaa ccattgggca caatcctgag
     1201 aggctgagtt tattaaaagg aggcattgta tacagcaatt cagtcgttac agtctctcca
     1261 acttacctta aagaaacact ttgttctgga tggcttgcaa gtgctttgat aacacatcgg
     1321 gacaagtact atggtattct aaatggaatt gatacgaaca ctgctggaaa ggaaatatgc
     1381 aagcagtatc ttcaacgggg gctcggtttg gctatagaag gcagtgtatc tagtaaccac
     1441 ttatctaata gggtaccttt agttgtttgc atttctagat tagttgctca gaaagggctt
     1501 catctaatca gacatgcgat cagtcatgtt aaagaacatg gtggacaaat gattgtgctg
     1561 ggaaaagctc tggatggtag ggttcaaaag gaatttgaag ctctagcaga ttcgcataac
     1621 aaaggttctg cagtccgcat cctcttgatg tacagtgagg agttgtctca catgttgtat
     1681 gccgctgctg acatggtgtt ggttccttct gtatatgagc cttgtggact tgcacagatg
     1741 ataggaatgc gttacggatc gataccaata gtaagaaaga ctggtggtct tgccgacact
     1801 gtttttgata tggatgatca ttcacaacct gagatagcaa acgggttcgt ctttgaagga
     1861 attgatgaag gttcccttag tttggctctt gatcgtgcat tctcgtacta ccaggaaaaa
     1921 ccaatcgagt gggcgaatct cgtagaaaaa gtcatgcaaa ttgacaacag ctggaataga
     1981 acggctggga cgtatattga tttgtacaac ttgataagag tgagatggtg acttcttgaa
     2041 cacatcttag ttttgtaagt gataaactga gaactcaaat cgtattaaag ttaaacatgt
     2101 gcaattagat aattagatca ttcctatcat caaataagcc aagaaccaag gaacactgtg
     2161 attgcccggt tctctgagca ttgggtatcg ttgttgtata ctgtcatctt ctaacattgc
     2221 cctaataatt tgcatattaa ttgatctcct tcacacatgg tcaacgattt ccatgtataa
     2281 aaacaa
//
LOCUS       XR_011778640            2060 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904061), transcript variant X3, misc_RNA.
ACCESSION   XR_011778640
VERSION     XR_011778640.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2060
                     /gene="LOC139904061"
                     /note="uncharacterized LOC139904061; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904061"
     misc_RNA        1..2060
                     /gene="LOC139904061"
                     /product="uncharacterized protein, transcript variant X3"
                     /db_xref="GeneID:139904061"
ORIGIN      
        1 ctccgtacaa ctttcaatgc atagaattgt atcgtgtcac atgtttagat atttacatga
       61 tatcggaata tgtgtctgga acttgaagaa ggaataatgc tcgaatctcg agtgaaggtt
      121 accaaaatcc ctgaaagcgt tgtcttgcaa caattacgtt atttcaatct cattcaatga
      181 cgtaatctcc actgtgtata ttcatttcgt gttacagaat tcatgattaa ttcgatttca
      241 ttgtgagaag aaggagatat agattattat tatttttata aaaataaaat tttatatcaa
      301 caatggatgt attgtgtgct accgttaatt gtttactttt aggtatctca cacaagagga
      361 aaacgattag atacgggaat cgatcttcaa tcaatttcag agttcaagca gttcattcgg
      421 atcaggtagg tgctgtgagt gatgacaagc cagaatcgtt aagtggtttg agatcaaaaa
      481 atgtcgaatg gccttctcca agtgatgaaa tccctttttg gaagagaaat ttccagaatc
      541 gggatgctaa tagagaggtt accgttgaca tcgagaaaga ttctgatctt ttgcatgtga
      601 ttcatgtgac tgctgaaatg gcgccaatag caaaagttgg tggtcttggt gatgtggtaa
      661 caggcctagc tcgtgcatgt ttattacgtg gacataaagt ggatatcatg cttcctttct
      721 atgagtgtat ccggaaggaa aacatccaag aattatcact aatgtccact tatgattcat
      781 attatgatgg gaactggatc aaaactaatg catatagcgg aatagtttca gacattccgg
      841 ttatacttgt tgaaccaatg aaccagtttt ttaaaggaga agatgtatat ggaggttcat
      901 acaatgagtt ggaggcttat ttatttttca gccgtgcttg ccttgaatgg atgcaggtaa
      961 ctggaacaca acctgatatc atacatgtcc atgaatggca gacaggggca ctgccacttc
     1021 tctactggga catgtatcat catctttcac ttcagaaacc aagaatagta ttgacgatcc
     1081 acaacatgga gcattatggg gaatgcagac aagaacaact tcaaaagtgt ggtcttgatg
     1141 gatctttata tgcaactatc gacaaggcga ttgatgatcg aaccattggg cacaatcctg
     1201 agaggctgag tttattaaaa ggaggcattg tatacagcaa ttcagtcgtt acagtctctc
     1261 caacttacct taaagaaaca ctttgttctg gatggcttgc aagtgctttg ataacacatc
     1321 gggacaagta ctatggtatt ctaaatggaa ttgatacggt aatgtggaac cctgattctg
     1381 atgttttctt gcctgccaac tataatgctc agaacactgc tggaaaggaa atatgcaagc
     1441 agtatcttca acgggggctc ggtttggcta tagaaggcag tgtatctagt aaccacttat
     1501 ctaatagggt acctttagtt gtttgcattt ctagattagt tgctcagaaa gggcttcatc
     1561 taatcagaca tgcgatcagt catgttaaag aacatggtgg acaaatgatt gtgctgggaa
     1621 aagctctgga tggtagggtt caaaaggaat ttgaagctct agcagattcg cataacaaag
     1681 gttctgcagt ccgcatcctc ttgatgtaca gtgaggagtt gtctcacatg ttgtatgccg
     1741 ctgctgacat ggtgttggtt ccttctgtat atgagccttg tggacttgca cagatgatag
     1801 gaatgcgtta cggatcggta cgtgattatg ttctatgatg atagggtgtc ttttattgta
     1861 attgttctat gtattatttg gaccatttac cttgatttgc tgtgttggaa ttctaatctc
     1921 aaacagatac caatagtaag aaagactggt ggtcttgccg acactgtttt tgatatggat
     1981 gatcattcac aacctgagat agcaaacggg ttcgtctttg aaggaattga tgaaggttcc
     2041 cttagtttgg ctcttgatcg
//
LOCUS       XM_071885997            1783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase STY13-like (LOC139904062), mRNA.
ACCESSION   XM_071885997
VERSION     XM_071885997.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1783
                     /gene="LOC139904062"
                     /note="serine/threonine-protein kinase STY13-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139904062"
     CDS             293..1531
                     /gene="LOC139904062"
                     /codon_start=1
                     /product="serine/threonine-protein kinase STY13-like"
                     /protein_id="XP_071742098.1"
                     /db_xref="GeneID:139904062"
                     /translation="MLEAPKFTGVMGLNNVHNNFVDLSQGFYHKLGEGSNMSIDSFNS
                     LQMSNGGGSVAMSLDNSSVGSNESHTRILNHQGLKPNKNYNDAQSVNRGRVSQGLSDD
                     ALARALLNPQFPTEGLENFDEWTIDLRKLSMGPAFAQGAFGKLYKGTYNGVDVAIKLL
                     EKPENDIDRAQLMEQQFQQEVMMLARLKHPNIVRFIGACRKPMVWCIITEYAKGGSVR
                     QFLTKRQNRSVPLKLAVKQALDVARGMEYVHALGLIHRDLKSDNLLISADRSIKIADF
                     GVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNM
                     TAVQAAFAVVNKGVRPTIPHDCLPVLGEIMVRCWDGNSDVRPPFSEVVRMLEHAENEI
                     MTTVRKARFRCCMSQPMTTD"
     misc_feature    704..1447
                     /gene="LOC139904062"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(704..715,725..727,758..760,764..766,869..871,
                     917..928,938..940,944..946,1061..1063,1067..1069,
                     1073..1078,1082..1084,1115..1117,1124..1126,1169..1180)
                     /gene="LOC139904062"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(704..715,725..727,758..760,764..766,869..871,
                     917..928,938..940,1061..1063,1067..1069,1073..1078,
                     1082..1084,1115..1117)
                     /gene="LOC139904062"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(713..715,938..940,944..946,1061..1063,1067..1069,
                     1073..1075,1124..1126,1169..1180)
                     /gene="LOC139904062"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1112..1138,1166..1180)
                     /gene="LOC139904062"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
     polyA_site      1783
                     /gene="LOC139904062"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctctatatc tatctatata tatctctctc tctatctctc tctataatat actccctata
       61 taaatataat aaataaatag cttcactttc gctctctaga ctttcatcgg gtcttttcat
      121 cgtcgtcaaa ccaaatattc tttcttctct tcttcaccat cttcatcgcg atcgtatatt
      181 tcacgttccc taattatcat cgcaatcgcc aattggttca aacaatcgac caaaacccta
      241 accttattct caatctggct ttttggttaa aggggtaagg aaagctggaa aaatgttgga
      301 ggctccaaag tttacaggcg tgatgggcct aaataatgtc cataataatt ttgttgatct
      361 atcacaaggg ttctatcata agcttggtga agggtcaaac atgtccatcg acagtttcaa
      421 cagtttacaa atgagcaatg gtggaggctc agttgcaatg tctcttgata atagtagtgt
      481 tggatctaat gaatctcata ctcgcatttt aaaccaccaa ggtcttaaac ctaacaagaa
      541 ttataatgat gctcagagtg tgaatagagg aagagtttct cagggattaa gtgatgacgc
      601 tttagctcga gctttattga accctcagtt tcctactgaa gggctcgaga atttcgatga
      661 atggacaatc gatttaagga aactcagcat ggggcctgct tttgcacaag gtgcttttgg
      721 gaaactgtat aaaggaactt acaatggggt ggatgttgct atcaagcttc ttgaaaaacc
      781 cgaaaatgac atagacaggg cacagcttat ggagcaacag ttccagcagg aagtcatgat
      841 gcttgcaaga ttaaaacacc caaacatagt taggttcatt ggtgcgtgcc ggaaaccaat
      901 ggtttggtgt attattaccg aatatgcaaa aggtggttcg gttcgacagt ttttgactaa
      961 gaggcagaac agatctgtgc ctttgaaatt agcagtaaag caagctttgg atgtcgcaag
     1021 gggaatggaa tacgtacatg cgcttggatt gattcataga gatttgaaat cagataatct
     1081 attaatttct gctgataggt caatcaagat tgctgatttt ggagttgctc gaattgaggt
     1141 gcagactgaa ggaatgacac cagaaacggg aacttaccgt tggatggctc cggagatgat
     1201 tcagcatagg ccatacactc agaaagtaga cgtgtacagc ttcgggatag tgctatggga
     1261 gctgataacc gggatgcttc cgttccaaaa catgacagct gtgcaggcgg catttgctgt
     1321 ggtcaataaa ggggtccgac ccaccatccc acatgactgc cttccggtac ttggtgaaat
     1381 tatggttcgt tgctgggacg gaaattcaga tgtgaggcca ccattctcag aagttgtgag
     1441 aatgctggaa catgctgaaa acgagattat gacaacggtt cgaaaggctc ggttcaggtg
     1501 ctgcatgagc caaccgatga ctaccgattg atgaggcgtg aaagatgaat gaatataaga
     1561 aaaagaaaag gtaaagaata tcaacaggtg aaaaggatga tatcatgtca tctatgtgta
     1621 tctattatca gggtaatttc tttcttcaga tatagggtga acaacggaag agaattatga
     1681 tatgaactta cttgttttat gtatttcttt ttggtttttt tgttgttgaa tatttatgga
     1741 ttgtgttact gaattagtag taatggagga gatttgtgtt gta
//
LOCUS       XR_011778641            1604 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904063), ncRNA.
ACCESSION   XR_011778641
VERSION     XR_011778641.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1604
                     /gene="LOC139904063"
                     /note="uncharacterized LOC139904063; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904063"
     ncRNA           1..1604
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904063"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904063"
ORIGIN      
        1 agttaaataa ataaatatgt atatccctgt caaagtcgaa ttcaaggaat atcctctagg
       61 tgtctggatt tctttcaaca agtcaaggta tcgatttcta tctacaaaat tatgatttct
      121 gttgatgttt tatgtatttc aatagtgtgt ttaacgtgta gtttgaaggt tattatatga
      181 tgattatagt gttttatgat ataattgctt tctgtccata atattcatca gactttattt
      241 cactgatcaa gtgttttaga tgtaatatag ttcaattggg cttgggtttt caaggaaatg
      301 attaacgacg agatgatgct gatgaaattg gagaggaatc caatatgtct aacttatgag
      361 gattaaggag atctttggtt ttttggattt gtggcctttc gtctctacct actttgatga
      421 tatcatctga aagatggcgt tcattttact ttcctttgtt ttttaggtaa atgatttttc
      481 cccctattat tttgtgctct tttttaagtc ttggtcttgg tatttgtttt ggttttgtat
      541 tatacctttg tcaaatattt catacggatt accatttttt aacgggccga gtgttaaaat
      601 tttagatgaa attattatgg atcatgggta aattaaggag gctaaacgtg aaattattgt
      661 cggatcatgg gtcggtttag gaggctaatc ggtttcaaca gtgaaactga caatatacac
      721 caatcaaatc tatcttatat ttacgttaat tggaaattgt atatattata atacgttgat
      781 atgatactct gctgattgga ggagatattc gattcataat tcatttcatg tgttggatat
      841 ctaacaacta atcaagcaca acaatttcgt aatctggagg ttaagaattt caaacctcca
      901 gtagcagcaa ctgttgctgt ggcggtcatg aaccaagaag agacggaagt cagtagtgtg
      961 agtggtgatg tgtgatatta atagcaacct aatcaacatg taatgtaaga tacaggcttc
     1021 tttttttatt ttattagttt tttgtaatgc aatatataag ttccttttat taataatttt
     1081 ttttttgttt tgattctaca cgtttttcgc aaagatagat ttcaatgtca aaagtatact
     1141 gaccacaagg tctgtccgaa cattccaaca ttagtgttgt ttgtcaggtt actttttgat
     1201 tttatgaagg ttataacatt actcggacag ttagacacat tttttgtggc atttgacaag
     1261 gagttcctag agacatgctg atatagttgc tgggtgggct tgccctaatg tgaagcagtc
     1321 catttgaacg attcgagact gcttttgagg tacccttcgt atagcgtgta ctaatcataa
     1381 atgtgattgt atactgttaa ttgttaaatt aatctgttat gaagacacaa ttgactgtaa
     1441 gagcaacatt tgcttccatt aattcgagac gtaaaggtta tcaaataaga agtacttcac
     1501 taaaattggt gactgatttg gttacaagtt aatcatttta tggataacat aataacattt
     1561 ccctttagca aatttgtaga caaatgtcac gtaagcctgc gata
//
LOCUS       XR_011778642            1463 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904065), transcript variant X1, ncRNA.
ACCESSION   XR_011778642
VERSION     XR_011778642.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1463
                     /gene="LOC139904065"
                     /note="uncharacterized LOC139904065; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904065"
     ncRNA           1..1463
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904065"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904065"
ORIGIN      
        1 ttaaaatatg agatccatca tcggcttgtg tttgttaagc ctcgaaacat tcaagaatag
       61 atgaaactga ctactgttcc ctgaaaagag ttactttggt atgttaatcc tactttcgtc
      121 tatgcagata caaaagtgta tagcaaatga tccatatgcc agaggatgag atactacggt
      181 ctaagtctgt agatcattac gcatataatt ctagtgactg gttcaacagg ttagatttta
      241 gctatgattt gaacaattac ggggtgtgcc ttctccaaaa ggaaagtttg aaaaaagctg
      301 gccagtgtaa gattttttgg cgcttatttt acggtttctg caattggttt aatttcgttt
      361 tttgttcaca tttcagattc tgactttgtg tgaccgtttt taaagatcta gtttcctttt
      421 tgtttctgtt tgtagctata tttaatctat agtaaacttt tgtgaaggcg ttagagcagt
      481 ttagcatcga ttttataata ggaatgttaa tgagaaacat atggatgccc tccatactaa
      541 aactcacata gtatatataa agttttccaa atgttatcca ggttagtatt tcgaactttt
      601 tgccgatact tttgtgaaat gggttattgg gtctgtgctg taatgctacg tgatatatct
      661 atccatcagg tcaaatgggt gaattaaatt ttttatttat ttttaagaaa aaacagctac
      721 tcgtacaaga gtttactaat tatgacccgc ccaacctgcc tgttgcccgg atttgcatcc
      781 caattgtttg gaaaacagtc atccttgaaa tagtccgatt ccacaatacc gttccaccgc
      841 aggtccagat gtcattgtaa tgagtattca aaatgggcca cgaaggtgtt ccagggggtt
      901 atctcaactt gaacctaagt gaacattttt gaactgatta gtatgttata tatatccttc
      961 gggtgccctt taatccagtc aagttcttac ttgtccaata acagttattc gtacattttg
     1021 gtcgtgatga gtgcttgtcc aaccgatatc tcattttcca gccctgtatc acaagccaaa
     1081 gttctccaat ttcaaatata acccaatgca gatgatttca actgaaaatt tggggaagaa
     1141 ctcaacatac gatcgctcat caggataggc tttcatcaat gacaactgtt gtgtgtttgt
     1201 taagccccga aacattcaac ggtagataaa actgacaact gttcctcgaa atgagctgat
     1261 tttggcattt tgtttttgaa gtgcatagaa aatgatcctt atgccagggg gtggatagcc
     1321 tatcatacag agtactctag agagcatact gtgggtattt cagtcaataa ttgcttcgaa
     1381 tatagatgat gatatttttt ggggttcatg ttttctttat tccggtacag taagtacatc
     1441 tgctacttta tcaattacag aaa
//
LOCUS       XR_011778643             765 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904065), transcript variant X2, ncRNA.
ACCESSION   XR_011778643
VERSION     XR_011778643.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..765
                     /gene="LOC139904065"
                     /note="uncharacterized LOC139904065; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904065"
     ncRNA           1..765
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904065"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904065"
ORIGIN      
        1 ttaaaatatg agatccatca tcggcttgtg tttgttaagc ctcgaaacat tcaagaatag
       61 atgaaactga ctactgttcc ctgaaaagag ttactttggt atgttaatcc tactttcgtc
      121 tatgcagata caaaagtgta tagcaaatga tccatatgcc agaggatgag atactacggt
      181 ctaagtctgt agatcattac gcatataatt ctagtgactg gttcaacagg ttagatttta
      241 gctatgattt gaacaattac ggggtgtgcc ttctccaaaa ggaaagtttg aaaaaagctg
      301 gccagtttat tcgtacattt tggtcgtgat gagtgcttgt ccaaccgata tctcattttc
      361 cagccctgta tcacaagcca aagttctcca atttcaaata taacccaatg cagatgattt
      421 caactgaaaa tttggggaag aactcaacat acgatcgctc atcaggatag gctttcatca
      481 atgacaactg ttgtgtgttt gttaagcccc gaaacattca acggtagata aaactgacaa
      541 ctgttcctcg aaatgagctg attttggcat tttgtttttg aagtgcatag aaaatgatcc
      601 ttatgccagg gggtggatag cctatcatac agagtactct agagagcata ctgtgggtat
      661 ttcagtcaat aattgcttcg aatatagatg atgatatttt ttggggttca tgttttcttt
      721 attccggtac agtaagtaca tctgctactt tatcaattac agaaa
//
LOCUS       XR_011778644            1665 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904066), transcript variant X1, ncRNA.
ACCESSION   XR_011778644
VERSION     XR_011778644.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1665
                     /gene="LOC139904066"
                     /note="uncharacterized LOC139904066; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904066"
     ncRNA           1..1665
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904066"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904066"
ORIGIN      
        1 tcatttctat catctcaaat tatagcgtag ttgtgcgtct tttatctttg gtttataggt
       61 taaaggatca gatatttcaa cttattgtgg acctcccgct gcgtatgctt cacagccagt
      121 ggaaacagta ggattgtgtt gtattgtcaa aacatattcg actactcttt gtttctcttc
      181 atatctgtct atttgcactc tgattgcctt ttcgcagatt aactatctca aatattagtg
      241 aagtatagaa gatgtccacg aatttgttcc agggttacct caacatggcc cttatagatg
      301 atgtcaacgg aaattttagt aaagatatta acaatcaaga gtaaataaaa ctgattattt
      361 gtcgtgcccg tcgaacatca cagcactatg cagatagaaa agtgtacagc aaatgatcca
      421 tatgccacag acggttctca ggtgatgggt tgcgaacctt tttagtcaat cttgattctg
      481 atgctataaa atctcataaa tgggatgatt tgttagagga gaagtctccg atgtatatga
      541 ttattccgac attagtaatt tctgaactat acatataagt gatttcaggt ttgccattat
      601 ataggcctca tataattctt ttaattgttc cttgtaaaac tctaatttgc tctaagtttc
      661 aggatttcat ttttcaaagt gatgacaata ggcaagttaa gtacaattgt tccacaaatc
      721 tctcactgca ccgaccatag taaatgatta atacgccaga gggtacgttt actgtgtgtg
      781 ccttagaaat ttaaatactt ttatatcgga tgagacaaga agggtggttt gattaaaggg
      841 gtcttctata acaaaaacaa atatcaccta tgtgtctgct cgctctttga tattattagt
      901 ttgaaggccc gggtcattgt aacagctgtt catccatcgt ggtcgttttc aaacgttgtt
      961 caatcaagcc ctatatacca aggtgcgcag atgatgtcaa ctgaaatttt agtttagaac
     1021 ttaacatatg agatccatca tcggcttgtg tttgttaagc ctcgaaacat tcaagaatag
     1081 atgaaactga ctactgttcc ctgaaaagag ttactttggt atgttaatcc tactttcgtc
     1141 tatgcagata caaaagtgta tagcaaatga tccatatgcc agaggattga tgggttcctt
     1201 tttgatctta tgggtcatat gatgcaaagt accatgatga gatactacgg tctaagtctg
     1261 tagatcatta ctcatataat tctagtgact ggttcaacag gttagatttt agctatgatt
     1321 tgaacaatta cggggtgtgc cttctccaaa aggaaagttt gaaaaaagct ggccagttta
     1381 ttcgtacatt ttggtcgtta tgagtgcttg tccaaccgat atctcatttt ccagccctgt
     1441 atcacaagcc aaagttctcc aatttcaaat ataacccaat gcagatgatt tcaactgaaa
     1501 atttggtgaa gaactcaaca tacgatcgct catcaggata ggctttcatc aatgacaact
     1561 gttgtgtgtt tgttaagccc cgaaacattc aacggtagat aaaactgaca actgttcctc
     1621 gaaatgagct gattttggca ttttgttttt gaagtgcata gaaaa
//
LOCUS       XR_011778645            1591 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904066), transcript variant X2, ncRNA.
ACCESSION   XR_011778645
VERSION     XR_011778645.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1591
                     /gene="LOC139904066"
                     /note="uncharacterized LOC139904066; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904066"
     ncRNA           1..1591
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904066"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904066"
ORIGIN      
        1 tcatttctat catctcaaat tatagcgtag ttgtgcgtct tttatctttg gtttataggt
       61 taaaggatca gatatttcaa cttattgtgg acctcccgct gcgtatgctt cacagccagt
      121 ggaaacagta ggattgtgtt gtattgtcaa aacatattcg actactcttt gtttctcttc
      181 atatctgtct atttgcactc tgattgcctt ttcgcagatt aactatctca aatattagtg
      241 aagtatagaa gatgtccacg aatttgttcc agggttacct caacatggcc cttatagatg
      301 atgtcaacgg aaattttagt aaagatatta acaatcaaga gtaaataaaa ctgattattt
      361 gtcgtgcccg tcgaacatca cagcactatg cagatagaaa agtgtacagc aaatgatcca
      421 tatgccacag acggttctca ggtgatgggt tgcgaacctt tttagtcaat cttgattctg
      481 atgctataaa atctcataaa tgggatgatt tgttagagga gaagtctccg atgtatatga
      541 ttattccgac attagtaatt tctgaactat acatataagt gatttcagga tttcattttt
      601 caaagtgatg acaataggca agttaagtac aattgttcca caaatctctc actgcaccga
      661 ccatagtaaa tgattaatac gccagagggt acgtttactg tgtgtgcctt agaaatttaa
      721 atacttttat atcggatgag acaagaaggg tggtttgatt aaaggggtct tctataacaa
      781 aaacaaatat cacctatgtg tctgctcgct ctttgatatt attagtttga aggcccgggt
      841 cattgtaaca gctgttcatc catcgtggtc gttttcaaac gttgttcaat caagccctat
      901 ataccaaggt gcgcagatga tgtcaactga aattttagtt tagaacttaa catatgagat
      961 ccatcatcgg cttgtgtttg ttaagcctcg aaacattcaa gaatagatga aactgactac
     1021 tgttccctga aaagagttac tttggtatgt taatcctact ttcgtctatg cagatacaaa
     1081 agtgtatagc aaatgatcca tatgccagag gattgatggg ttcctttttg atcttatggg
     1141 tcatatgatg caaagtacca tgatgagata ctacggtcta agtctgtaga tcattactca
     1201 tataattcta gtgactggtt caacaggtta gattttagct atgatttgaa caattacggg
     1261 gtgtgccttc tccaaaagga aagtttgaaa aaagctggcc agtttattcg tacattttgg
     1321 tcgttatgag tgcttgtcca accgatatct cattttccag ccctgtatca caagccaaag
     1381 ttctccaatt tcaaatataa cccaatgcag atgatttcaa ctgaaaattt ggtgaagaac
     1441 tcaacatacg atcgctcatc aggataggct ttcatcaatg acaactgttg tgtgtttgtt
     1501 aagccccgaa acattcaacg gtagataaaa ctgacaactg ttcctcgaaa tgagctgatt
     1561 ttggcatttt gtttttgaag tgcatagaaa a
//
LOCUS       XR_011778646             608 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904067), ncRNA.
ACCESSION   XR_011778646
VERSION     XR_011778646.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..608
                     /gene="LOC139904067"
                     /note="uncharacterized LOC139904067; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904067"
     ncRNA           1..608
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904067"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904067"
ORIGIN      
        1 cacaatcacc caaacaaaca aaacccctaa tttacgaatg gatcatcttt attctttaac
       61 ccgacccacc attgcaaact gatgaatatc aagaatccgt acccaccatt caccattgtt
      121 actgctcaac ttcaagaatg atagcctata tcatacagag tactctagag agcatactgg
      181 gggtatttca gtcaataatt gcttcgaata tagatgatga tattttttgg ggttcatgtt
      241 ttctttattc cggtacagta aaagtacatc tgctacttta tcaattacag aaaatggaat
      301 cgaagggtct ccttacagga ttatgtttgc aatgtatgta taacctgatt ttgttcctca
      361 tgattaacac ttcaccacaa acagccaaaa ggtcatgacc atgatactga ggctgatact
      421 gcacccacat atgcttgctt tattcaagga tcatattaca tatcatagtg aagtaccctt
      481 ctttaattaa taacaaaata aaagaatctg ttctgtttta cctactaatt atatccatat
      541 atcttgatat gctttattat ccagtgttta caagttcaac tttttaggtt gggaaggctg
      601 ctatctta
//
LOCUS       XR_011778647            3291 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable pre-mRNA-splicing
            factor ATP-dependent RNA helicase DEAH5 (LOC139904068), transcript
            variant X1, misc_RNA.
ACCESSION   XR_011778647
VERSION     XR_011778647.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3291
                     /gene="LOC139904068"
                     /note="probable pre-mRNA-splicing factor ATP-dependent RNA
                     helicase DEAH5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139904068"
     misc_RNA        1..3291
                     /gene="LOC139904068"
                     /product="probable pre-mRNA-splicing factor ATP-dependent
                     RNA helicase DEAH5, transcript variant X1"
                     /db_xref="GeneID:139904068"
ORIGIN      
        1 aaaaatctat tgcttttatt aatttgtgtt tgctgtaaac cctagctagc taattattat
       61 ggtttctcaa actaaagaac tgactctgaa aaaactaacg tatctctccg ccgtatttaa
      121 agtatgtacg gaactcaaat cctataaagt gtgtgatgat aaagttgtgg cagaacacat
      181 tacatccata gctcgaacgt gtaaaactgt tgatgaaatt ctgcccccaa aatcgaaatt
      241 taaatccggt aaggatacca acaggggatc aaaatcgagc tttcctgctc tgaatgtagg
      301 tgatggtaga gaccgtgcga agacattgga gaaagaaatt gaattggaag ctaaacaaaa
      361 gattaggaac aataatagcg agtatgatga cagaaataat aatgttgggg ttcgttcaag
      421 gagacctttg aagaggagga tgagctcacc ggagagatgg gtgacgagtc ggttgatttc
      481 gtcacgagtt ttgagtgtga aagagtatcc gatgatgtat gatgatgaaa aagctaatga
      541 aggaatgatg atgtatcaag aagaaggtgg atatgatgag gagcttgagg tcgagttaaa
      601 cgaagatgag cctgcgtttc tgcaaggaaa gagtcattat tcaatggata tgtcaccggt
      661 caagatattt aaaaaccctc tgggttcatt gagtcgtgca gcagcaacgc agtctgctct
      721 tataaaagaa aaaagagagg ttagggacct aaaacaaaga acgatgcttg attcgatccc
      781 taaagatccg aatcgaacgt gggaaaaccc gtctggtgat aggtgttttg cgcaggatct
      841 gagggaagtt ggcgtgtttg cacgtgatac gcttgaatgg aagaaggatt ctaatggtaa
      901 agcattgaca tttggtcaaa ggtcaaagct ttctcttcag gaacagagac agagtttgcc
      961 tatatacaaa ttgaagaagg aattggttca agctgtgaat gataaccagg ttttggttgt
     1021 tattggtgag acaggttctg ggaagacaac gcaggtcaca caatatctgg ccgaagcagg
     1081 ttacaccact cggggtaaga ttggatgcac acagcctaga aggctggctg caatatctgt
     1141 ggctaaaagg gttgctgaag agtttgggtg tcgttttggt gaggaagttg gatactcgat
     1201 tcgttttgag gactgtacct gcccggaaac agtgattaaa tacatgacgg atggtatgct
     1261 tctgagggaa attttggttg ataaaaacct ctctcagtat tcagtgatta tgcttgatga
     1321 agctcatgag agaacaacgc ataccgatgt acttttcggg ttattaaaag gcctagtgaa
     1381 aagaagaccc gaccttcggt taattgtcac atcagctaca ttagatgctg aaaagttttc
     1441 tgcttatttc tttaattgca atatcttcac aattccagga aggacatttc cagtggagat
     1501 attttacgtc aaacagcggg caatcaacta tcttgatgca gctttggaga cggtattgca
     1561 gatccacttg acagaacccg agggggacat acttttgttt ttgaccggtg aggaagaaat
     1621 caatcatgct tgcaagtgtt tatatgagag aatgaaagag ttaaatgttc ctgagttgat
     1681 catattaccg gcttatagtg cgctacctag tgaaacacaa tctaagatat ttgagcctgc
     1741 accacctggg aagagaaagg tggttgtggc cactaatatt gctgaagctt ctttgacaat
     1801 cgatgggatt atttatgtca ttgatcctgg tttcgctaag caaaatgtgt ataacccaaa
     1861 acaaggtttt gaatcacttg tcatcactcc aatatctcag gcatcagcta agcaacgggc
     1921 tgggcgtgca ggacgtacag ggccaggaag gtgctataga ttatacactg aaagtgcttt
     1981 taacaacgaa atgtcaccta cttcaattcc agaaatacaa aggataaatc ttggatttat
     2041 agcattaaat ttgaaatcaa tggggattaa tgatctgatg tctttcgatt ttatggaccc
     2101 accgtctcct caagctttga tttctgctct tgagctgctt tacactcttg aagctcttga
     2161 tgaagaaggg cttttaacaa atatgggtag gataatggcc gaattccccc tcgatcctcc
     2221 gttgtctaag atgcttcttg cgagtgtcga tttgggttgc agtgatgaga ttttgaccat
     2281 aattgcgatg attaccactg ggaacatctt taacagacct aaggaaaaac aagaccaagc
     2341 aaataaaaaa aaggctgaat tttttcaacc tgaaggagat catttaactt tgcttgctgt
     2401 ttacgaggct tggaaagcca ataaattttc aaagacatgg tgcaaagaga attttgttaa
     2461 gtcaaaatcg cttaggacgg cacgagatgt cagaaaccaa cttttatata ttatgaacag
     2521 gtacaaattg aacgttgcga gagctgggaa gaactttgct aagatacgga aggcaataac
     2581 agccgggttt ttcttccatg ctgcgcggaa ggacccaaaa gaggggtatc gtacgatagt
     2641 tgggaaccaa ccggtttaca tacaccctgg tagtgctctt ttcgataggg aaccggattg
     2701 ggtcatctac catgagctag tgatgacaaa aaaagaatac atgcgcgagg ccactgtttt
     2761 agatccaaaa tggcttgtgg aattggcacc aaggttcttt ttaaggtctg tctaagcgtt
     2821 aaagacaaga acggatagag cctctgtatg attgctataa cgaacccaat tcatggcgtt
     2881 tgagcaagcg acgggcatga tgatcagtta ctttttctgg atgatccaac tatgttacaa
     2941 agttttgtgc tttttaatac atggtaaagc agaaacagga cacgtcggca cgggtttgtt
     3001 gaagcttacc ttgtacaatt taaagactag acgtaaacac gtcggcaggt tacataaaca
     3061 ttaacactac taatgtagtt gaagattgta ttgtggcacg aatgactaag catgtggaag
     3121 aagttcaaaa caatatatgc aatactcaga tatatagatg aatgcgccaa agtctatacc
     3181 cgaaagtgcg ccaaaggaga aggtaaaagt ccgcttccca tcacccgaga gctacaaaaa
     3241 taagagacat gaaggtgcta tcaaatacga ggcaatgtcg tttgtgtttt a
//
LOCUS       XM_071885999            3110 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable pre-mRNA-splicing
            factor ATP-dependent RNA helicase DEAH5 (LOC139904068), transcript
            variant X2, mRNA.
ACCESSION   XM_071885999
VERSION     XM_071885999.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3110
                     /gene="LOC139904068"
                     /note="probable pre-mRNA-splicing factor ATP-dependent RNA
                     helicase DEAH5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139904068"
     CDS             59..2815
                     /gene="LOC139904068"
                     /codon_start=1
                     /product="probable pre-mRNA-splicing factor ATP-dependent
                     RNA helicase DEAH5"
                     /protein_id="XP_071742100.1"
                     /db_xref="GeneID:139904068"
                     /translation="MVSQTKELTLKKLTYLSAVFKVCTELKSYKVCDDKVVAEHITSI
                     ARTCKTVDEILPPKSKFKSGKDTNRGSKSSFPALNVGDGRDRAKTLEKEIELEAKQKI
                     RNNNSEYDDRNNNVGVRSRRPLKRRMSSPERWVTSRLISSRVLSVKEYPMMYDDEKAN
                     EGMMMYQEEGGYDEELEVELNEDEPAFLQGKSHYSMDMSPVKIFKNPLGSLSRAAATQ
                     SALIKEKREVRDLKQRTMLDSIPKDPNRTWENPSGDRCFAQDLREVGVFARDTLEWKK
                     DSNGKALTFGQRSKLSLQEQRQSLPIYKLKKELVQAVNDNQVLVVIGETGSGKTTQVT
                     QYLAEAGYTTRGKIGCTQPRRLAAISVAKRVAEEFGCRFGEEVGYSIRFEDCTCPETV
                     IKYMTDGMLLREILVDKNLSQYSVIMLDEAHERTTHTDVLFGLLKGLVKRRPDLRLIV
                     TSATLDAEKFSAYFFNCNIFTIPGRTFPVEIFYVKQRAINYLDAALETVLQIHLTEPE
                     GDILLFLTGEEEINHACKCLYERMKELNVPELIILPAYSALPSETQSKIFEPAPPGKR
                     KVVVATNIAEASLTIDGIIYVIDPGFAKQNVYNPKQGFESLVITPISQASAKQRAGRA
                     GRTGPGRCYRLYTESAFNNEMSPTSIPEIQRINLGFIALNLKSMGINDLMSFDFMDPP
                     SPQALISALELLYTLEALDEEGLLTNMGRIMAEFPLDPPLSKMLLASVDLGCSDEILT
                     IIAMITTGNIFNRPKEKQDQANKKKAEFFQPEGDHLTLLAVYEAWKANKFSKTWCKEN
                     FVKSKSLRTARDVRNQLLYIMNRYKLNVARAGKNFAKIRKAITAGFFFHAARKDPKEG
                     YRTIVGNQPVYIHPGSALFDREPDWVIYHELVMTKKEYMREATVLDPKWLVELAPRFF
                     LRSV"
     misc_feature    95..>217
                     /gene="LOC139904068"
                     /note="GIPC homology 2 (GH2) domain-like family; Region:
                     GH2_like; cl41749"
                     /db_xref="CDD:425380"
     misc_feature    953..>2791
                     /gene="LOC139904068"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; Region: HrpA; COG1643"
                     /db_xref="CDD:441249"
ORIGIN      
        1 aaaaatctat tgcttttatt aatttgtgtt tgctgtaaac cctagctagc taattattat
       61 ggtttctcaa actaaagaac tgactctgaa aaaactaacg tatctctccg ccgtatttaa
      121 agtatgtacg gaactcaaat cctataaagt gtgtgatgat aaagttgtgg cagaacacat
      181 tacatccata gctcgaacgt gtaaaactgt tgatgaaatt ctgcccccaa aatcgaaatt
      241 taaatccggt aaggatacca acaggggatc aaaatcgagc tttcctgctc tgaatgtagg
      301 tgatggtaga gaccgtgcga agacattgga gaaagaaatt gaattggaag ctaaacaaaa
      361 gattaggaac aataatagcg agtatgatga cagaaataat aatgttgggg ttcgttcaag
      421 gagacctttg aagaggagga tgagctcacc ggagagatgg gtgacgagtc ggttgatttc
      481 gtcacgagtt ttgagtgtga aagagtatcc gatgatgtat gatgatgaaa aagctaatga
      541 aggaatgatg atgtatcaag aagaaggtgg atatgatgag gagcttgagg tcgagttaaa
      601 cgaagatgag cctgcgtttc tgcaaggaaa gagtcattat tcaatggata tgtcaccggt
      661 caagatattt aaaaaccctc tgggttcatt gagtcgtgca gcagcaacgc agtctgctct
      721 tataaaagaa aaaagagagg ttagggacct aaaacaaaga acgatgcttg attcgatccc
      781 taaagatccg aatcgaacgt gggaaaaccc gtctggtgat aggtgttttg cgcaggatct
      841 gagggaagtt ggcgtgtttg cacgtgatac gcttgaatgg aagaaggatt ctaatggtaa
      901 agcattgaca tttggtcaaa ggtcaaagct ttctcttcag gaacagagac agagtttgcc
      961 tatatacaaa ttgaagaagg aattggttca agctgtgaat gataaccagg ttttggttgt
     1021 tattggtgag acaggttctg ggaagacaac gcaggtcaca caatatctgg ccgaagcagg
     1081 ttacaccact cggggtaaga ttggatgcac acagcctaga aggctggctg caatatctgt
     1141 ggctaaaagg gttgctgaag agtttgggtg tcgttttggt gaggaagttg gatactcgat
     1201 tcgttttgag gactgtacct gcccggaaac agtgattaaa tacatgacgg atggtatgct
     1261 tctgagggaa attttggttg ataaaaacct ctctcagtat tcagtgatta tgcttgatga
     1321 agctcatgag agaacaacgc ataccgatgt acttttcggg ttattaaaag gcctagtgaa
     1381 aagaagaccc gaccttcggt taattgtcac atcagctaca ttagatgctg aaaagttttc
     1441 tgcttatttc tttaattgca atatcttcac aattccagga aggacatttc cagtggagat
     1501 attttacgtc aaacagcggg caatcaacta tcttgatgca gctttggaga cggtattgca
     1561 gatccacttg acagaacccg agggggacat acttttgttt ttgaccggtg aggaagaaat
     1621 caatcatgct tgcaagtgtt tatatgagag aatgaaagag ttaaatgttc ctgagttgat
     1681 catattaccg gcttatagtg cgctacctag tgaaacacaa tctaagatat ttgagcctgc
     1741 accacctggg aagagaaagg tggttgtggc cactaatatt gctgaagctt ctttgacaat
     1801 cgatgggatt atttatgtca ttgatcctgg tttcgctaag caaaatgtgt ataacccaaa
     1861 acaaggtttt gaatcacttg tcatcactcc aatatctcag gcatcagcta agcaacgggc
     1921 tgggcgtgca ggacgtacag ggccaggaag gtgctataga ttatacactg aaagtgcttt
     1981 taacaacgaa atgtcaccta cttcaattcc agaaatacaa aggataaatc ttggatttat
     2041 agcattaaat ttgaaatcaa tggggattaa tgatctgatg tctttcgatt ttatggaccc
     2101 accgtctcct caagctttga tttctgctct tgagctgctt tacactcttg aagctcttga
     2161 tgaagaaggg cttttaacaa atatgggtag gataatggcc gaattccccc tcgatcctcc
     2221 gttgtctaag atgcttcttg cgagtgtcga tttgggttgc agtgatgaga ttttgaccat
     2281 aattgcgatg attaccactg ggaacatctt taacagacct aaggaaaaac aagaccaagc
     2341 aaataaaaaa aaggctgaat tttttcaacc tgaaggagat catttaactt tgcttgctgt
     2401 ttacgaggct tggaaagcca ataaattttc aaagacatgg tgcaaagaga attttgttaa
     2461 gtcaaaatcg cttaggacgg cacgagatgt cagaaaccaa cttttatata ttatgaacag
     2521 gtacaaattg aacgttgcga gagctgggaa gaactttgct aagatacgga aggcaataac
     2581 agccgggttt ttcttccatg ctgcgcggaa ggacccaaaa gaggggtatc gtacgatagt
     2641 tgggaaccaa ccggtttaca tacaccctgg tagtgctctt ttcgataggg aaccggattg
     2701 ggtcatctac catgagctag tgatgacaaa aaaagaatac atgcgcgagg ccactgtttt
     2761 agatccaaaa tggcttgtgg aattggcacc aaggttcttt ttaaggtctg tctaagcgtt
     2821 aaagacaaga acggatagag cctctgtatg attgctataa cgaacccaat tcatggcgtt
     2881 tgagcaagcg acgggcatga tgatcagtta ctttttctgg atgatccaac tatgttacaa
     2941 agttttgtgc tttttaatac atggtaattt tttatttcat gttatgattg cacaaaagga
     3001 ggttgggtta caaagcaatg atatgttttc aaatcatatg cttttctcat gtatcgtttg
     3061 tttctttcaa gttgcattag ttgaagttga tatccagaaa ttgtttgtta
//
LOCUS       XM_071886000            1607 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904069), transcript variant X1, mRNA.
ACCESSION   XM_071886000
VERSION     XM_071886000.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1607
                     /gene="LOC139904069"
                     /note="uncharacterized LOC139904069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904069"
     CDS             166..513
                     /gene="LOC139904069"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742101.1"
                     /db_xref="GeneID:139904069"
                     /translation="MLRLPDDDRDLVLLVAVGALAGGGNLLISVDSVALATLFEAADN
                     VKMVELSSKEIQVVNCHNRRRRRGRYFTQYSNTVSFHPTSEHATVTVLTNRRRFSCKF
                     ESNKLFGSEPERK"
     polyA_site      1607
                     /gene="LOC139904069"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaaactatc tagtccagaa gactccttac cccatcacca ttcgagaagc atccgtctct
       61 ctgtgtcttc aaaatggaaa accccaaacc ctttttggct gcttcgattg gagaaaaaaa
      121 taggccttcc tcgatttaca tcgccacgat ctcaggctag ggtgtatgct tcgattacct
      181 gatgatgatc gggatttggt tttgctggtg gcggtaggtg cattagctgg tggtggtaat
      241 ttgttgatta gtgttgatag tgttgcactt gctactttgt ttgaagctgc tgataatgtt
      301 aaaatggttg agcttagctc caaagaaatt caagtcgtaa actgtcataa tcgacgacgg
      361 cgtaggggcc gttattttac ccaatacagc aatacagtgt cgtttcatcc aacatcagaa
      421 catgctactg ttactgtact aacaaatcga agaaggtttt cttgcaaatt cgaatcaaac
      481 aaactatttg gatccgaacc cgaaagaaag taaacaaaaa taataaaaat gcaaaattgg
      541 ttttccggtg gcggtggtgg cgataacaac caaacttcac ttccgaaaac gacgtcgtcc
      601 ctattatcag actggaattc atatgcttca gctcaagcat cggatgtaag ttctagtagt
      661 ctcgttggtt cattcgacat tgaatctgct gttaaatctg caaacgatac cgtttccggc
      721 acctttaatg tgtaagtcat tttgcatttg catatatgta gttttaacat aagtgacagt
      781 tactgtactt atttagggtt tattagttga ttgtttgagt tctttttaat cgtttatagc
      841 agttgtaaac ttttttcccc aaatcgattt aatcactttt tagtctgtat tatataatgt
      901 gatgatgatg atactatttt tgaggtttaa gtatatactt gcgatcgtta ttaattaaat
      961 atgatttttg aataagctat atgccctgat ttatgagagg tctattcagg tggtgaaatt
     1021 ggtactgctg ctgcacccat aatggttgtg caacagatag ttaataggtt gacatgagca
     1081 gatatatatt gcgcagactt caagtttcag ggtttcattg actacaagcc actcgatctg
     1141 ttgttaggct atggcgtcat tcaatagtag tgtttggtgg ttatatcgct ttatctataa
     1201 acctaacggt ttatctctta acctcttctt tactatttta atgtcatttt aaaatttatg
     1261 aaattatatt tggttgtttc tgattttttc gagatggtgt tgatgtgtag atgttgaaag
     1321 gccgatgcaa tctaagctaa caaaagcaaa ggaggataga aggttgtgaa gaagtctctt
     1381 tggttgatct tgatgacaac gtgaagtcat ctgtagatga aaggtggtat gttgtagtgt
     1441 cccaagtgca atgacatgac aatatcagtg gtttcaaggt aagatttaaa attataatca
     1501 tttgagccga ctctgataac tttaaattga tatgatgccg atttttaaat ctgggtttga
     1561 atgattggta tatatattac taataattaa tttatttctt aaggtaa
//
LOCUS       XM_071886001            1329 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904069), transcript variant X2, mRNA.
ACCESSION   XM_071886001
VERSION     XM_071886001.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1329
                     /gene="LOC139904069"
                     /note="uncharacterized LOC139904069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904069"
     CDS             166..513
                     /gene="LOC139904069"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742102.1"
                     /db_xref="GeneID:139904069"
                     /translation="MLRLPDDDRDLVLLVAVGALAGGGNLLISVDSVALATLFEAADN
                     VKMVELSSKEIQVVNCHNRRRRRGRYFTQYSNTVSFHPTSEHATVTVLTNRRRFSCKF
                     ESNKLFGSEPERK"
     polyA_site      1329
                     /gene="LOC139904069"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaaactatc tagtccagaa gactccttac cccatcacca ttcgagaagc atccgtctct
       61 ctgtgtcttc aaaatggaaa accccaaacc ctttttggct gcttcgattg gagaaaaaaa
      121 taggccttcc tcgatttaca tcgccacgat ctcaggctag ggtgtatgct tcgattacct
      181 gatgatgatc gggatttggt tttgctggtg gcggtaggtg cattagctgg tggtggtaat
      241 ttgttgatta gtgttgatag tgttgcactt gctactttgt ttgaagctgc tgataatgtt
      301 aaaatggttg agcttagctc caaagaaatt caagtcgtaa actgtcataa tcgacgacgg
      361 cgtaggggcc gttattttac ccaatacagc aatacagtgt cgtttcatcc aacatcagaa
      421 catgctactg ttactgtact aacaaatcga agaaggtttt cttgcaaatt cgaatcaaac
      481 aaactatttg gatccgaacc cgaaagaaag taaacaaaaa taataaaaat gcaaaattgg
      541 ttttccggtg gcggtggtgg cgataacaac caaacttcac ttccgaaaac gacgtcgtcc
      601 ctattatcag actggaattc atatgcttca gctcaagcat cggatgtaag ttctagtagt
      661 ctcgttggtt cattcgacat tgaatctgct gttaaatctg caaacgatac cgtttccggc
      721 acctttaatg tgtggtgaaa ttggtactgc tgctgcaccc ataatggttg tgcaacagat
      781 agttaatagg ttgacatgag cagatatata ttgcgcagac ttcaagtttc agggtttcat
      841 tgactacaag ccactcgatc tgttgttagg ctatggcgtc attcaatagt agtgtttggt
      901 ggttatatcg ctttatctat aaacctaacg gtttatctct taacctcttc tttactattt
      961 taatgtcatt ttaaaattta tgaaattata tttggttgtt tctgattttt tcgagatggt
     1021 gttgatgtgt agatgttgaa aggccgatgc aatctaagct aacaaaagca aaggaggata
     1081 gaaggttgtg aagaagtctc tttggttgat cttgatgaca acgtgaagtc atctgtagat
     1141 gaaaggtggt atgttgtagt gtcccaagtg caatgacatg acaatatcag tggtttcaag
     1201 gtaagattta aaattataat catttgagcc gactctgata actttaaatt gatatgatgc
     1261 cgatttttaa atctgggttt gaatgattgg tatatatatt actaataatt aatttatttc
     1321 ttaaggtaa
//
LOCUS       XM_071886002            1599 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904069), transcript variant X3, mRNA.
ACCESSION   XM_071886002
VERSION     XM_071886002.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1599
                     /gene="LOC139904069"
                     /note="uncharacterized LOC139904069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904069"
     CDS             166..513
                     /gene="LOC139904069"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742103.1"
                     /db_xref="GeneID:139904069"
                     /translation="MLRLPDDDRDLVLLVAVGALAGGGNLLISVDSVALATLFEAADN
                     VKMVELSSKEIQVVNCHNRRRRRGRYFTQYSNTVSFHPTSEHATVTVLTNRRRFSCKF
                     ESNKLFGSEPERK"
     polyA_site      1599
                     /gene="LOC139904069"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaaactatc tagtccagaa gactccttac cccatcacca ttcgagaagc atccgtctct
       61 ctgtgtcttc aaaatggaaa accccaaacc ctttttggct gcttcgattg gagaaaaaaa
      121 taggccttcc tcgatttaca tcgccacgat ctcaggctag ggtgtatgct tcgattacct
      181 gatgatgatc gggatttggt tttgctggtg gcggtaggtg cattagctgg tggtggtaat
      241 ttgttgatta gtgttgatag tgttgcactt gctactttgt ttgaagctgc tgataatgtt
      301 aaaatggttg agcttagctc caaagaaatt caagtcgtaa actgtcataa tcgacgacgg
      361 cgtaggggcc gttattttac ccaatacagc aatacagtgt cgtttcatcc aacatcagaa
      421 catgctactg ttactgtact aacaaatcga agaaggtttt cttgcaaatt cgaatcaaac
      481 aaactatttg gatccgaacc cgaaagaaag taaacaaaaa taataaaaat gcaaaattgg
      541 ttttccggtg gcggtggtgg cgataacaac caaacttcac ttccgaaaac gacgtcgtcc
      601 ctattatcag actggaattc atatgcttca gctcaagcat cggatgtaag ttctagtagt
      661 ctcgttggtt cattcgacat tgaatctgct gttaaatctg caaacgatac cgtttccggc
      721 acctttaatg tgtaagtcat tttgcatttg catatatgta gttttaacat aagtgacagt
      781 tactgtactt atttagggtt tattagttga ttgtttgagt tctttttaat cgtttatagc
      841 agttgtaaac ttttttcccc aaatcgattt aatcactttt tagtctgtat tatataatgt
      901 gatgatgatg atactatttt tgaggtttaa gtatatactt gcgatcgtta ttaattaaat
      961 atgatttttg aataagctat atgccctgat ttatgagagg tctattcagg tggtgaaatt
     1021 ggtactgctg ctgcacccat aatggttgtg caacagatag ttaataggtt gacatgagca
     1081 gatatatatt gcgcagactt caagtttcag ggtttcattg actacaagcc actcgatctg
     1141 ttgttaggct atggcgtcat tcaatagtag tgtttggtgg ttatatcgct ttatctataa
     1201 acctaacggt ttatctctta acctcttctt tactatttta atgtcatttt aaaatttatg
     1261 aaattatatt tggttgtttc tgattttttc gagatggtgt tgatgtgtag atgttgaaag
     1321 gccgatgcaa tctaagctaa caaaagcaaa gaaggttgtg aagaagtctc tttggttgat
     1381 cttgatgaca acgtgaagtc atctgtagat gaaaggtggt atgttgtagt gtcccaagtg
     1441 caatgacatg acaatatcag tggtttcaag gtaagattta aaattataat catttgagcc
     1501 gactctgata actttaaatt gatatgatgc cgatttttaa atctgggttt gaatgattgg
     1561 tatatatatt actaataatt aatttatttc ttaaggtaa
//
LOCUS       XM_071886003            1505 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904069), transcript variant X4, mRNA.
ACCESSION   XM_071886003
VERSION     XM_071886003.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1505
                     /gene="LOC139904069"
                     /note="uncharacterized LOC139904069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904069"
     CDS             166..513
                     /gene="LOC139904069"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742104.1"
                     /db_xref="GeneID:139904069"
                     /translation="MLRLPDDDRDLVLLVAVGALAGGGNLLISVDSVALATLFEAADN
                     VKMVELSSKEIQVVNCHNRRRRRGRYFTQYSNTVSFHPTSEHATVTVLTNRRRFSCKF
                     ESNKLFGSEPERK"
     polyA_site      1505
                     /gene="LOC139904069"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaaactatc tagtccagaa gactccttac cccatcacca ttcgagaagc atccgtctct
       61 ctgtgtcttc aaaatggaaa accccaaacc ctttttggct gcttcgattg gagaaaaaaa
      121 taggccttcc tcgatttaca tcgccacgat ctcaggctag ggtgtatgct tcgattacct
      181 gatgatgatc gggatttggt tttgctggtg gcggtaggtg cattagctgg tggtggtaat
      241 ttgttgatta gtgttgatag tgttgcactt gctactttgt ttgaagctgc tgataatgtt
      301 aaaatggttg agcttagctc caaagaaatt caagtcgtaa actgtcataa tcgacgacgg
      361 cgtaggggcc gttattttac ccaatacagc aatacagtgt cgtttcatcc aacatcagaa
      421 catgctactg ttactgtact aacaaatcga agaaggtttt cttgcaaatt cgaatcaaac
      481 aaactatttg gatccgaacc cgaaagaaag taaacaaaaa taataaaaat gcaaaattgg
      541 ttttccggtg gcggtggtgg cgataacaac caaacttcac ttccgaaaac gacgtcgtcc
      601 ctattatcag actggaattc atatgcttca gctcaagcat cggatgtaag ttctagtagt
      661 ctcgttggtt cattcgacat tgaatctgct gttaaatctg caaacgatac cgtttccggc
      721 acctttaatg tgtaagtcat tttgcatttg catatatgta gttttaacat aagtgacagt
      781 tactgtactt atttagggtt tattagttga ttgtttgagt tctttttaat cgtttatagc
      841 agttgtaaac ttttttcccc aaatcgattt aatcactttt tagtctgtat tatataatgt
      901 gatgatgatg atactatttt tgaggtttaa gtatatactt gcgatcgtta ttaattaaat
      961 atgatttttg aataagctat atgccctgat ttatgagagg tctattcagg tggtgaaatt
     1021 ggtactgctg ctgcacccat aatggttgtg caacagatag ttaataggtt gacatgagca
     1081 gatatatatt gcgcagactt caagtttcag ggtttcattg actacaagcc actcgatctg
     1141 ttgttaggct atggcgtcat tcaatagtag tgtttggtgg ttatatcgct ttatctataa
     1201 acctaacgat gttgaaaggc cgatgcaatc taagctaaca aaagcaaagg aggatagaag
     1261 gttgtgaaga agtctctttg gttgatcttg atgacaacgt gaagtcatct gtagatgaaa
     1321 ggtggtatgt tgtagtgtcc caagtgcaat gacatgacaa tatcagtggt ttcaaggtaa
     1381 gatttaaaat tataatcatt tgagccgact ctgataactt taaattgata tgatgccgat
     1441 ttttaaatct gggtttgaat gattggtata tatattacta ataattaatt tatttcttaa
     1501 ggtaa
//
LOCUS       XM_071886004            1497 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904069), transcript variant X5, mRNA.
ACCESSION   XM_071886004
VERSION     XM_071886004.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1497
                     /gene="LOC139904069"
                     /note="uncharacterized LOC139904069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904069"
     CDS             166..513
                     /gene="LOC139904069"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742105.1"
                     /db_xref="GeneID:139904069"
                     /translation="MLRLPDDDRDLVLLVAVGALAGGGNLLISVDSVALATLFEAADN
                     VKMVELSSKEIQVVNCHNRRRRRGRYFTQYSNTVSFHPTSEHATVTVLTNRRRFSCKF
                     ESNKLFGSEPERK"
     polyA_site      1497
                     /gene="LOC139904069"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaaactatc tagtccagaa gactccttac cccatcacca ttcgagaagc atccgtctct
       61 ctgtgtcttc aaaatggaaa accccaaacc ctttttggct gcttcgattg gagaaaaaaa
      121 taggccttcc tcgatttaca tcgccacgat ctcaggctag ggtgtatgct tcgattacct
      181 gatgatgatc gggatttggt tttgctggtg gcggtaggtg cattagctgg tggtggtaat
      241 ttgttgatta gtgttgatag tgttgcactt gctactttgt ttgaagctgc tgataatgtt
      301 aaaatggttg agcttagctc caaagaaatt caagtcgtaa actgtcataa tcgacgacgg
      361 cgtaggggcc gttattttac ccaatacagc aatacagtgt cgtttcatcc aacatcagaa
      421 catgctactg ttactgtact aacaaatcga agaaggtttt cttgcaaatt cgaatcaaac
      481 aaactatttg gatccgaacc cgaaagaaag taaacaaaaa taataaaaat gcaaaattgg
      541 ttttccggtg gcggtggtgg cgataacaac caaacttcac ttccgaaaac gacgtcgtcc
      601 ctattatcag actggaattc atatgcttca gctcaagcat cggatgtaag ttctagtagt
      661 ctcgttggtt cattcgacat tgaatctgct gttaaatctg caaacgatac cgtttccggc
      721 acctttaatg tgtaagtcat tttgcatttg catatatgta gttttaacat aagtgacagt
      781 tactgtactt atttagggtt tattagttga ttgtttgagt tctttttaat cgtttatagc
      841 agttgtaaac ttttttcccc aaatcgattt aatcactttt tagtctgtat tatataatgt
      901 gatgatgatg atactatttt tgaggtttaa gtatatactt gcgatcgtta ttaattaaat
      961 atgatttttg aataagctat atgccctgat ttatgagagg tctattcagg tggtgaaatt
     1021 ggtactgctg ctgcacccat aatggttgtg caacagatag ttaataggtt gacatgagca
     1081 gatatatatt gcgcagactt caagtttcag ggtttcattg actacaagcc actcgatctg
     1141 ttgttaggct atggcgtcat tcaatagtag tgtttggtgg ttatatcgct ttatctataa
     1201 acctaacgat gttgaaaggc cgatgcaatc taagctaaca aaagcaaaga aggttgtgaa
     1261 gaagtctctt tggttgatct tgatgacaac gtgaagtcat ctgtagatga aaggtggtat
     1321 gttgtagtgt cccaagtgca atgacatgac aatatcagtg gtttcaaggt aagatttaaa
     1381 attataatca tttgagccga ctctgataac tttaaattga tatgatgccg atttttaaat
     1441 ctgggtttga atgattggta tatatattac taataattaa tttatttctt aaggtaa
//
LOCUS       XR_011778648             341 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904070), ncRNA.
ACCESSION   XR_011778648
VERSION     XR_011778648.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..341
                     /gene="LOC139904070"
                     /note="uncharacterized LOC139904070; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904070"
     ncRNA           1..341
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904070"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904070"
ORIGIN      
        1 catatacacg catacaactc acactttatt tatactctga tctatcattc gttgatatta
       61 ttgaagacca attttggata tgaattcatg cgattaaaca aacaagattt aatcaggtga
      121 taaatgaaaa ggtgaaggct cagtgatata agacaactga gtgctcgtgt ttccagtgtt
      181 ttgccctgca ggtgtgtatt agcagcttta ggtgggtttt gcaaggcaaa tcaagatgtt
      241 tgacacagtg tataactctg atgttttgta ataaataata tatatttgaa acggtctgta
      301 ttaataacgt aacaccagtg aatcgtgtaa tcatataatt a
//
LOCUS       XM_071886005            1437 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides oxysterol-binding
            protein-related protein 4C (LOC139904071), mRNA.
ACCESSION   XM_071886005
VERSION     XM_071886005.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1437
                     /gene="LOC139904071"
                     /note="oxysterol-binding protein-related protein 4C;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139904071"
     CDS             63..1253
                     /gene="LOC139904071"
                     /codon_start=1
                     /product="oxysterol-binding protein-related protein 4C"
                     /protein_id="XP_071742106.1"
                     /db_xref="GeneID:139904071"
                     /translation="MDMIQVYEEGTNNEEDELVTALTAPLSLDFESVNDFKSPNLLQR
                     VFSLLKTVRPGSDLTRFTLPPIFNIPKSQLQCYGESVYSVNNDILRRCGDGGTPLERF
                     TYVVAWSISTLRPLMFGVAPYNPVLGETHHVSRGNLNVLLEQVSHHPPVSALHATNEK
                     DNIEMTWCQYAIPKFCGTFIETKVLGKRQLKLVNKGETYVMNSPNLVIKFLPVPDVEW
                     LGNVTIQCQETGLEAQLCYKGTSFFGKRGNYRSIRGKIVSLPEMKTIYEINGHWDKTV
                     TIKDISNGKMTVIYKAKDVISALKTPVVKDVKGLCGSESAVVWAKVSECILNKSWDKA
                     NAAKTAIEEHERETARIRKLKGETWVPKHFVLSSNCKETGESEWEVRPKSTMVQPAPI
                     VVPV"
     misc_feature    201..1199
                     /gene="LOC139904071"
                     /note="Oxysterol-binding protein; Region: Oxysterol_BP;
                     pfam01237"
                     /db_xref="CDD:460126"
ORIGIN      
        1 tatgctttaa ttaaatacga tcaaaaactt tccaacatta tttttgacga aattaataaa
       61 aaatggatat gatacaggtt tatgaagaag gcacgaataa tgaagaagat gagttggtta
      121 cagctctaac ggcgccgtta tctttagatt ttgagtccgt taacgatttt aaatcaccaa
      181 atttgttaca gcgtgttttt agtttattga agactgtacg gcctggatcc gatcttactc
      241 gattcacgct gccaccgatc ttcaacattc ccaaatcaca gctgcaatgt tatggagaat
      301 cagtatatag tgtgaacaac gacattctta gaagatgtgg cgatggtggg accccgcttg
      361 agagatttac ttatgtggtt gcttggagca tatctacttt gcggcctctg atgtttggtg
      421 tggctcccta caatcctgtt cttggtgaga ctcaccatgt atcgagaggc aacctgaatg
      481 tgctacttga acaggtttca catcatccgc ccgtgagtgc cctccatgct actaatgaga
      541 aagacaacat cgaaatgaca tggtgtcaat atgcaattcc aaaattctgt gggaccttca
      601 ttgaaactaa ggtgctcgga aaaagacagc tgaagcttgt taacaagggt gaaacttacg
      661 taatgaactc tccgaatctc gttataaagt ttctaccggt gcctgatgtc gagtggttgg
      721 gcaatgtcac aattcaatgc caagaaactg ggcttgaagc ccagttgtgt tacaaaggca
      781 cttcattttt cggcaaacga ggaaattaca ggtctattag aggaaagatt gtatctttac
      841 cagagatgaa aactatatac gaaataaatg gtcattggga taagaccgtg acaattaagg
      901 atatcagcaa tggaaaaatg acagtgattt ataaggctaa ggatgtaatt tctgcactaa
      961 aaacgcctgt cgtcaaggat gtgaagggat tgtgtgggag cgaatctgct gtggtatggg
     1021 ctaaagttag tgagtgtata ttgaataagt catgggataa ggcgaatgct gcaaaaacag
     1081 ccatcgaaga acatgaaaga gaaacagcaa gaattaggaa gttaaaaggt gaaacttggg
     1141 ttcctaaaca ttttgtacta tcatctaatt gtaaggaaac tggtgagtcc gagtgggagg
     1201 ttagaccgaa aagtacaatg gtacaacctg ctcctatcgt tgtccctgtt tgataatcta
     1261 acaaagtaac aatgtgtcgt atccaatagc taggtgcaaa cgatatgttc gtatatatta
     1321 tctctattcg tttgcatacg tgtagtgttg tgcatattac caggaaaaaa catcattttt
     1381 gctatcaaga tgatcacaac acctgtaact taagaaggta tatattgaaa cctgttg
//
LOCUS       XM_071886006            1836 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycosyltransferase
            BC10-like (LOC139904072), mRNA.
ACCESSION   XM_071886006
VERSION     XM_071886006.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1836
                     /gene="LOC139904072"
                     /note="glycosyltransferase BC10-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139904072"
     CDS             348..1490
                     /gene="LOC139904072"
                     /codon_start=1
                     /product="glycosyltransferase BC10-like"
                     /protein_id="XP_071742107.1"
                     /db_xref="GeneID:139904072"
                     /translation="MKDLQVFQPRHRAQSKKPTWIIVLVSFVCVFLVFAYIYPLQNSG
                     ACYIILSSSCNTLSSWLPPPAREFSDNEITSRVVIKDILNMPSIDTDNPKIAFMFMSP
                     GSLPFEKLWEKFFEGHEGRFSVHIHASREKPVHSSPYFMNREIRSGKVDWGKISMVDA
                     EKRLLANALKDPDNRHFVLLSDSCVPLRDFNYVYNYLMYTNVSFIDSFEDPGPHGSGR
                     YSEHMLPEVEKKHFRKGAQWFTMKRQHAIIVMADNLYYTKFRDYCRPGMEGRNCYADE
                     HYLPTFFHMLDPKGIANWSVTHVDWSEGKWHPKSYRAQDISPQLIKNITSITESVHVT
                     SHEKKETMIMPCMWNGINRPCYLFARKFLPETQDRMIDLLTNQSTF"
     misc_feature    630..1319
                     /gene="LOC139904072"
                     /note="Core-2/I-Branching enzyme; Region: Branch;
                     pfam02485"
                     /db_xref="CDD:426795"
     polyA_site      1836
                     /gene="LOC139904072"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttagaaaaat cccaggcaga attgttctgg tgctttggtc tctgttaaaa aagtaagcaa
       61 ccaatcacaa agcaccaatc ttctcaatct ctcaatcatc aagaacaata catacaaacg
      121 atccacatat ataaaacatt tttctccaga tctttaaagt cctttctaag gatctttttt
      181 atttgaagat atataaataa aagaactatc tttcgaacca ggttttaata atcgatattt
      241 ggaagtcaat ggtggttaag tattagttta aactctataa atagttttga gtatgaacgt
      301 gtgatgcatt atctttaaat aaaatcaact tagtgtggcg tataggcatg aaagacttgc
      361 aagtgtttca gcctcgccat cgtgctcaat caaagaaacc aacttggatt atcgtattag
      421 tttcgtttgt ttgtgttttc ttagtgtttg catacattta tccacttcaa aattcgggtg
      481 cctgttacat catcttgtct tctagttgta atacattatc tagttggctt cctcctcctg
      541 caagagaatt tagtgacaac gagatcacct ctcgcgttgt tatcaaggat attttgaaca
      601 tgccatcaat tgataccgat aatcccaaga ttgcgttcat gtttatgagc cctggatcgt
      661 taccgttcga aaagctgtgg gagaaattct ttgagggaca tgaaggtagg ttttcagttc
      721 atattcatgc ttcaagagag aaaccggtcc attccagccc ttactttatg aatcgtgaaa
      781 ttcgcagtgg caaggtagat tggggtaaaa tatcgatggt tgatgcagag aaacgacttt
      841 tggcgaatgc gcttaaagat cccgacaatc gtcattttgt attactttct gatagttgtg
      901 tacctttgcg tgatttcaac tacgtgtaca attatctaat gtacacaaat gtcagcttca
      961 ttgacagctt tgaggatcct ggtcctcatg gaagtggtcg atactcggag catatgttgc
     1021 ctgaagttga gaagaaacac tttagaaagg gtgcacagtg gttcacgatg aagcgccaac
     1081 atgcgatcat agttatggcc gataatctct actatacgaa attcagggat tattgcaggc
     1141 ctggtatgga agggcgcaat tgctatgccg atgaacatta tttgccgacc tttttccata
     1201 tgcttgatcc gaaggggatt gcaaactggt cagttacaca tgttgattgg tctgaaggaa
     1261 aatggcatcc gaaatcttac agagcgcaag acatctcacc ccaactaatc aaaaacatta
     1321 cgtccatcac cgagagtgtc catgtcacaa gccacgaaaa gaaggagacg atgattatgc
     1381 cttgtatgtg gaacggaatc aaccggccat gttacctatt cgcacgcaag ttcttacccg
     1441 agactcaaga tcgcatgatt gaccttttaa caaatcaatc cacattttga gcttctaaaa
     1501 tatactgtta agattggatc aacccattta gtacagccaa gttttacatc gttgtatatt
     1561 tcatctttcc aagggatcat cgccttaact tggcagcatc ttacaagttt tggccgattt
     1621 atggaacagt tgggactcat atgaagacag gtttagagac tgctgatttt gattttgatt
     1681 ttgattttta atttgaattt tggccattta tataagggta ggtgtgctgt aattattttt
     1741 gagagtgatg taaaagccat tgcaatggct aaacttttgt aagatgaaac aacaggtttc
     1801 aatatatacc ttcttaagtt acaggtgttg tgatca
//
LOCUS       XM_071886007            2800 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like protease
            SBT2.6 (LOC139904073), mRNA.
ACCESSION   XM_071886007
VERSION     XM_071886007.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2800
                     /gene="LOC139904073"
                     /note="subtilisin-like protease SBT2.6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904073"
     CDS             124..2613
                     /gene="LOC139904073"
                     /codon_start=1
                     /product="subtilisin-like protease SBT2.6"
                     /protein_id="XP_071742108.1"
                     /db_xref="GeneID:139904073"
                     /translation="MMMFLVVGGPLKMKAVDCLFIIIVIFCFLVIGKSDIYIVTIEGE
                     PVTSYRGGVSGFKATAVEFNENLDVTSDHVTSYSHHLELKHDTLLETLFDQGTYKKLY
                     SYKHLINGFAVDVSPEQAETLRLANGVKSVDKDWKVKKLTTHTPQFLGLPTGVWPSGG
                     GFERAGEDIVIGFIDSGIFPNHPSFENRKTQPYGPLPKYRGKCEVDSDTKKSFCNGKI
                     VGAQHFAEAAIAAGSFNPSVDYASPMDGDGHGSHTAAIAAGNNGIPVRVHGYEFGKAS
                     GMAPRARIAVYKALYRLFGGFVADVVAAIEMAVHDGVDILNLSVGPNSPPATTRTTFL
                     NPFDATLLSAVKAGVFVVQAAGNGGPFAKSLVSYSPWIVSVAAAVDDRRYKNHLTLGN
                     GKILAGIGLSPSTRLNQKYTLVAANDVVLDSSVMKFSPTDCQRPEVLNKNLVKGNILL
                     CGYSFNFVMGSASVKKVAETAKSLGAVGFVLAVENVSPGTKFDPVPMGMPGILIFDIS
                     KSMELIDYYKASTTRDWTGRVKSFKATGTIGDGLEPILHKSAPIVALFSARGPNIRDY
                     TFRDADLLKPDILAPGALIWASWSPNGTDEANYIGENFAMISGTSMAAPHIAGISALI
                     KQKHPHWSPAAIKSALMTSSNTLDRAEKPILAEQYSGTETLTFVSATPFDYGSGHVNP
                     RAALDPGLIFDAGYEDYLGFLCTTPGIDYHELLKYTHRPCNYTLGHPYNLNTPSITVS
                     HLVRTQTITRTVTNINEEETYTITSKMAPAISIETSPPSMTIRPGASHKFTVTLTVRS
                     ITRSYSFGEVLLKGSRGHKVRIPVVAMGYKR"
     misc_feature    304..540
                     /gene="LOC139904073"
                     /note="Peptidase inhibitor I9; Region: Inhibitor_I9;
                     pfam05922"
                     /db_xref="CDD:428674"
     misc_feature    535..2058
                     /gene="LOC139904073"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; Region: Peptidases_S8_3; cd04852"
                     /db_xref="CDD:173795"
     misc_feature    order(646..648,868..870,1024..1026,1081..1083,1192..1194,
                     1954..1956)
                     /gene="LOC139904073"
                     /note="active site"
                     /db_xref="CDD:173795"
     misc_feature    order(646..648,868..870,1954..1956)
                     /gene="LOC139904073"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     misc_feature    1285..1701
                     /gene="LOC139904073"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     Region: PA_subtilisin_like; cd02120"
                     /db_xref="CDD:239035"
     misc_feature    1588..1596
                     /gene="LOC139904073"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]; other site"
                     /db_xref="CDD:239035"
     misc_feature    <1723..2184
                     /gene="LOC139904073"
                     /note="Peptidase domain in the S8 and S53 families;
                     Region: Peptidases_S8_S53; cl10459"
                     /db_xref="CDD:415849"
     misc_feature    2314..2592
                     /gene="LOC139904073"
                     /note="Fibronectin type-III domain; Region: fn3_6;
                     pfam17766"
                     /db_xref="CDD:465493"
ORIGIN      
        1 ttgtacatac cgtatatcac ccaatttcaa aagatttaag ctacttgaaa ttaaagtgaa
       61 aatgaagatt cgtgtagtta aattcggtta attttgtttt tgttctggct ctaattcaag
      121 ttcatgatga tgtttttggt tgtaggagga ccattgaaga tgaaggcagt ggattgtctg
      181 tttatcatta tagttatatt ctgttttttg gttattggga aatcagatat ttacattgta
      241 acaatagaag gagagcccgt aacaagttat agaggcggtg ttagtggttt caaagccact
      301 gctgttgaat ttaatgaaaa tcttgatgtt actagtgatc atgtgacatc atactctcat
      361 caccttgaac tcaagcacga cactcttctg gaaacgttgt ttgatcaagg aacttacaag
      421 aaactctaca gttacaagca tcttatcaat ggtttcgcag ttgacgtttc acccgaacag
      481 gcagaaacgc taaggctagc caatggagtg aaatcagtgg ataaagattg gaaggtgaaa
      541 aaacttacga cacacacacc acaatttttg gggcttccaa ccggtgtatg gcccagcggg
      601 ggcggatttg agagagccgg tgaggacatt gtgataggat ttatcgattc gggtattttc
      661 ccgaatcatc caagttttga gaatcgtaag actcaaccgt atgggcctct tccaaaatac
      721 agaggaaaat gtgaagttga ttctgataca aaaaagagtt tttgcaacgg aaagattgtt
      781 ggagcacaac attttgccga agctgcaatt gcagctggtt cttttaatcc ttcggttgat
      841 tatgcttctc caatggatgg tgatggacat ggaagccaca ctgcagcaat tgcagccgga
      901 aataatggga tcccagtgcg agttcatgga tacgaattcg gaaaagcaag tggaatggct
      961 ccacgtgcta ggattgctgt gtacaaggcg ctctacaggc tctttggagg atttgttgct
     1021 gatgttgttg cagccataga gatggcggtt catgatggtg ttgacatctt gaatctgtca
     1081 gtgggaccca acagtccacc ggccaccacg agaaccacat tcttaaaccc gtttgatgct
     1141 acccttctct cagctgtaaa agctggagtt tttgttgtac aagcagctgg aaatggcgga
     1201 cctttcgcaa aatctttagt gtcttatagt ccatggatcg tatctgtagc tgctgctgtt
     1261 gacgatcggc gatataaaaa ccatttgacc ctcggaaacg ggaagatact tgcgggaatc
     1321 ggtttgtcac cttcgacgag gttaaatcag aaatatacgc tcgttgcagc taatgatgtt
     1381 gtgttggatt cttcggttat gaagtttagt cctactgatt gccagagacc cgaagttctg
     1441 aacaaaaatt tggtgaaagg gaacattcta ctttgtggtt attcgttcaa ttttgttatg
     1501 ggtagtgcat cggttaaaaa agttgctgaa actgctaaga gtcttggtgc agtcggcttt
     1561 gttcttgctg ttgaaaacgt ttcaccggga accaaattcg acccggttcc tatgggcatg
     1621 cctgggattc tcatttttga cattagcaag tcaatggagc ttatagacta ctacaaagcg
     1681 tctactacac gagactggac gggacgagtg aaaagtttta aagcgacagg aaccatcgga
     1741 gatggtttgg agcctatact tcacaaatca gcaccgatag tcgcgttgtt ttcagcccgc
     1801 ggaccaaaca ttagagatta cacctttcgt gatgcggatc ttcttaaacc cgatattcta
     1861 gcacctggtg ctttaatctg ggcttcttgg tctcctaatg gaaccgatga ggctaattat
     1921 ataggtgaga atttcgcaat gatatcagga acgagcatgg ccgcaccaca tatagcggga
     1981 atatcggctc ttataaagca gaaacatcct cattggagcc cggcagctat caagtcagct
     2041 ttgatgacat catcaaatac actggaccga gcggaaaagc ctattctagc cgaacaatat
     2101 tcagggaccg aaacattaac gtttgtctct gcaacacctt ttgattatgg cagtggccat
     2161 gtcaaccccc gagctgctct ggaccctggt cttatctttg atgcaggtta cgaagattat
     2221 ttaggattct tgtgcacaac acctggaatc gactatcacg agctactaaa gtacactcac
     2281 cgcccatgta attacacact cggccaccct tacaacctaa atacaccatc aattacagtc
     2341 tctcatttgg taagaacaca aaccataaca cgaacggtca caaatattaa cgaagaagaa
     2401 acatatacaa tcacttcaaa aatggcacca gctatatcca ttgaaacgag ccctccgtcc
     2461 atgactataa gaccgggtgc gtcacataag tttaccgtca ctttaaccgt tcgatcaata
     2521 accaggagtt atagttttgg tgaagtttta ttaaagggaa gcagagggca taaggttcgg
     2581 ataccagttg tcgctatggg ctataagcgg tagctagtgt tagcgttggt tcgtgattgt
     2641 gtgattttat tcttttgtaa aagtgtttac aaaaataaaa ttattgaaaa tggtaggtgt
     2701 atttttattt atatggtaaa agatgtaaag aaagttgtag tatagggcga aaaactactc
     2761 ttaattgttt actgctgttc ctataaagtt tttgcttact
//
LOCUS       XM_071886008            2882 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904074), mRNA.
ACCESSION   XM_071886008
VERSION     XM_071886008.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2882
                     /gene="LOC139904074"
                     /note="uncharacterized LOC139904074; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139904074"
     CDS             393..2684
                     /gene="LOC139904074"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742109.1"
                     /db_xref="GeneID:139904074"
                     /translation="MSRAAPIEPAKSTLPESASSSGDLSPERPDSGSYRSFGDQLRGV
                     QWRIDLGILPSSSSSSSIDDFRRVTANSRRSYAALRRRLLINHHVPKDENNFRDHVMD
                     NPLSQNPDSMWGRFFHKAELEKMVDQDLSRLYPEHGSYFQTPGCQVVLRRILLLWSIR
                     HPNYGYRQGMHELLAPLLYVLQADLERLSEVRKQYQDYFTDNFDGLSLNVTDSSYMSD
                     LEKDSPDDIETQNDNMKVNDINELEPKIQTIISFSDAYGAEGELGIVLSEKFMEHDAY
                     SMFDALMIGDKGAVSMASFFSHSPSPQNGLPPVIEASSALYHLLSIVDLSLYTHLVEL
                     GVEPQYFSLRWLRVLFGREFALEDLLVVWDEIFALDNNRSSVGSRNVADVTSGVLNSS
                     RGAFISSLAVSMILYLRSSLLATENPTTCLQRLLNFPEDVNLVKLIKKAKSLMNLAIE
                     AINSIPEPVHGGKPYESGKPRGRSLSTDLTTSGSQSQRSLVRDSYWEEKWQVMNKEEE
                     GKRQASLNKHIQNRIKSWSERVKMRLSRSESAFFLSKVTRSPVRRNLVDNLAQSEKDE
                     KLVTDTSSTENGANTENSSIFNDPLSLPVSATNNNNNNHNNEEVASPLPVSDPPEDII
                     HFKEVKNEISTNNLRDMRPNSGKFQWLWMFARPGPEGSVENSGYTSEPTISPVAEYNQ
                     KNEVPSTSTTADDISKKREAADQNKMYSLHNLAESMLENIEVIESIFRKEKFQTEPVD
                     NLSINAMAALEELRKISNLLSEM"
     misc_feature    636..1496
                     /gene="LOC139904074"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; Region: TBC; smart00164"
                     /db_xref="CDD:214540"
ORIGIN      
        1 ccatccgtaa tttaacattt tattttcata tgcacaatct atctatggat acatagatat
       61 agatatcaca cataatagat acgcgtataa tgatatctgt atgttcttgg agcttcatcg
      121 cacgtcgacg tcatcttttc tgttgatcct cacgatatat tgaaaaaatc gtacaaataa
      181 taacgtattc gtatattttt ctcttcaaat tccaaaattt tgcctcatac accccataat
      241 tcttaatcat tagagcgctt gatttaaatt gtatgttaga tcgccgttaa tttatgctca
      301 aatctatcga tcattgtgat acactcttat cagaattggg gattacatgc gttgattgag
      361 atttctaggg ttttgtgaat tttgtttgaa ccatgtcacg tgcggctcca atcgagccgg
      421 cgaagagtac attaccggaa tctgcatcct catcgggaga tttgtcaccg gagagacctg
      481 attctggcag ttatcgcagt tttggtgatc aattgagagg ggttcaatgg cgcattgatt
      541 tagggatttt accttcttct tcttcctctt cttccatcga tgattttcgt cgtgtaactg
      601 ccaattcccg tagaagttat gctgctttaa ggaggaggct tttaatcaat catcatgtac
      661 ctaaagacga aaacaatttc cgtgatcatg ttatggacaa tccactgtcg caaaaccctg
      721 atagtatgtg gggccgtttt tttcacaaag cggagttgga gaaaatggtt gaccaggact
      781 tgtcaagatt gtatcctgaa catggtagct actttcagac acctgggtgc caagttgtgt
      841 tgagacgaat tttgttacta tggagtatta gacatccaaa ttacggttac aggcaaggga
      901 tgcatgaact tttggctccg cttctatatg ttcttcaggc tgatttagag cgactgtctg
      961 aagtgcggaa gcaataccaa gattacttta cggacaattt tgatgggtta tcgttaaacg
     1021 tgaccgattc atcttacatg tcagatctgg aaaaagattc tccagacgat attgaaaccc
     1081 aaaatgataa tatgaaggtt aatgatatta atgaactgga acctaagata caaaccatta
     1141 tttcgtttag tgatgcttac ggggcagagg gtgaattggg tattgtttta tctgaaaagt
     1201 ttatggaaca cgatgcgtac tctatgtttg atgctttgat gattggagat aaaggtgcag
     1261 tttcaatggc tagttttttc tcacattctc cttcaccaca aaacggattg ccacctgtca
     1321 tagaagcatc atctgcatta taccatttac tatcaatagt cgatttgtct ttatacactc
     1381 atcttgttga gttaggagtc gaaccacagt acttttcgct tcgttggtta cgtgttttat
     1441 ttggacgtga gtttgccctt gaagaccttt tagttgtctg ggatgaaatt tttgcacttg
     1501 ataataatag atcaagtgtt gggtccagaa acgttgctga tgtcacttct ggcgtactta
     1561 attcgtctag gggagccttt atttcatcac ttgcggtttc aatgatactt tatttgcgtt
     1621 cttcgcttct tgcaactgaa aaccctacaa cctgtcttca aagactgtta aactttcccg
     1681 aggatgttaa tcttgtgaaa ctgataaaaa aggctaaatc tttaatgaat cttgcaattg
     1741 aagctattaa ttcgattccc gaacctgttc atgggggtaa accttatgaa tctggaaaac
     1801 cgaggggtcg tagtctttct actgatttga ctacatctgg aagtcaaagt caacggtctt
     1861 tggttcggga tagttactgg gaagaaaaat ggcaggttat gaacaaagaa gaagaaggga
     1921 aaaggcaagc tagtttaaat aaacatattc aaaacaggat taaaagctgg tcagagagag
     1981 taaagatgcg tttatcaaga tctgagtctg cgtttttcct ttcaaaagta acccgatcac
     2041 ccgttaggag aaacttggtt gataatctag ctcagtccga aaaggatgaa aaattagtta
     2101 ctgacacgtc ttcaaccgaa aacggtgcta atacagaaaa ctcctccatt tttaatgacc
     2161 cgttgagctt accggtttct gctactaata acaataacaa taatcataac aatgaagaag
     2221 ttgcatcacc tttaccagta tcggatccac ctgaagatat tatacatttt aaggaggtga
     2281 agaatgaaat tagtacgaac aatttaagag acatgcgacc aaattcggga aagtttcagt
     2341 ggttatggat gtttgcaaga cctggaccag agggttcggt agagaacagt gggtacacat
     2401 ctgagcctac tatatctccc gtcgctgaat acaatcagaa aaacgaagta ccatcgacct
     2461 ccacgacagc agatgacatc agcaaaaaac gagaagctgc tgatcagaac aagatgtact
     2521 ctttgcataa tcttgctgaa tccatgcttg aaaatattga ggtgattgaa tctatcttcc
     2581 gaaaagaaaa atttcaaaca gaacctgtag ataacttgtc aataaatgcc atggcagctc
     2641 ttgaagagct acggaagatt agcaatcttt tatcagagat gtgaggtgtt tttttttttc
     2701 ctttatatgt tacataattg tataattgtg tatgtaatgc tgctgtaatt atgattattg
     2761 agaatgcttc aaattctctc tcatggtcat tcttgtaggt tatgattaat ttctgggcat
     2821 ttcattggct tgtaaatgta catatctcta gtaacttcaa tttgagataa ttgattggtc
     2881 ac
//
LOCUS       XM_071886009            1296 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 2-oxoglutarate-dependent
            dioxygenase 19-like (LOC139904075), mRNA.
ACCESSION   XM_071886009
VERSION     XM_071886009.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1296
                     /gene="LOC139904075"
                     /note="2-oxoglutarate-dependent dioxygenase 19-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139904075"
     CDS             97..1059
                     /gene="LOC139904075"
                     /codon_start=1
                     /product="2-oxoglutarate-dependent dioxygenase 19-like"
                     /protein_id="XP_071742110.1"
                     /db_xref="GeneID:139904075"
                     /translation="MSSNNKANGHEMHESIPIIDYSLLTSNNADVRSKAVKDLGNACK
                     DWGCYMLVNHGIQKSLSQKILNASNEFFDMEKEDKIEFASRDPMNPISYSNTFNPAKG
                     TIHSVSRQALRLIVNPVFHCPNKPQGFSDVASEYVKKTKVVGLELLKGISESLGLESS
                     YMNEELSLESGFQIFALNYYPFLSDVDHQRGLVQHADHSFLTLLYENDVPGLEVLCNG
                     EWILMTGVPDAFLVINGDHLEIFSNGLYKRKFHRVIMKDERTRISLVRSFGPSVETIV
                     RPSSRLVDENHPPGYLPKKFGEYVEDMIKFAMKGKDVFEELRVH"
     misc_feature    139..1056
                     /gene="LOC139904075"
                     /note="oxidoreductase; Region: PLN02947"
                     /db_xref="CDD:215510"
     polyA_site      1296
                     /gene="LOC139904075"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taatcggtgg caaaccaaca tattatatca cccatcactt gaactacaac tcgatcaatc
       61 gaaccctcat ttgatctaaa actcgatcga tcaaacatgt cttcaaacaa caaagctaat
      121 ggtcatgaga tgcatgagtc gatacccatc attgactact ctttactcac ttcaaacaat
      181 gcagatgtgc gttccaaagc cgtcaaagat cttggtaatg cctgcaaaga ctggggctgt
      241 tacatgttgg tgaatcatgg gattcaaaag agtttgtccc aaaagatact gaatgcatcg
      301 aatgagtttt ttgatatgga gaaagaagat aagattgaat ttgcatctcg tgatcctatg
      361 aatcctatct catatagcaa cacattcaat cctgctaaag gaactataca ctctgtttca
      421 aggcaggctc ttcgactcat tgttaatcct gtttttcatt gtccaaacaa acctcaaggt
      481 ttcagtgacg ttgcatcgga atatgtcaag aagacaaaag tggttgggtt ggagttgtta
      541 aaaggcatat cagagagctt aggacttgaa tcatcataca tgaacgaaga attaagtttg
      601 gagtcagggt ttcagatatt tgcgctcaac tattatccgt ttctctcgga tgttgatcac
      661 caacgagggc tagtgcaaca tgcggatcat agcttcttga ctttgctcta tgaaaacgac
      721 gttccaggtc ttgaagttct ttgtaacggg gaatggattc ttatgactgg tgttccggac
      781 gcgttcttag tcattaatgg ggaccatctt gagattttta gcaatggatt gtacaagaga
      841 aagtttcatc gagtgatcat gaaggacgaa cgtacgagaa tctcacttgt gcgtagtttt
      901 ggtccatcgg ttgagacgat tgttaggcca tcgtctaggc ttgttgatga gaaccaccct
      961 cctggttatc ttccgaagaa atttggtgaa tatgtagagg atatgataaa atttgcaatg
     1021 aaagggaagg atgtctttga ggaacttaga gttcattagc gacgctatac aacgaccaat
     1081 cttggctata caacaaggaa tatgtccaat aatgtttcat ttaataatgt gtttgcttag
     1141 tatgaattta tatttcgatt atatctaaat taagtaaaga cttgttctat atataagatt
     1201 gatataatat ataaggacaa tgttaaatgt agtcgttaaa actataatat cgtctttttt
     1261 ttaatataat ttgataacaa tatttattca tgatga
//
LOCUS       XM_071886010            1700 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein CHLOROPLAST IMPORT
            APPARATUS 2 (LOC139904076), mRNA.
ACCESSION   XM_071886010
VERSION     XM_071886010.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1700
                     /gene="LOC139904076"
                     /note="protein CHLOROPLAST IMPORT APPARATUS 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139904076"
     CDS             327..1532
                     /gene="LOC139904076"
                     /codon_start=1
                     /product="protein CHLOROPLAST IMPORT APPARATUS 2"
                     /protein_id="XP_071742111.1"
                     /db_xref="GeneID:139904076"
                     /translation="MSSCLRGGTGRAYGFDLENIVKSTSNTSSRTSNSHSSSPSSTLS
                     ESSNSPLTVSTRKPRTQRKRPNQTYNEAAALLSTACPNIFSITKKNNNHSKFPNKHTY
                     LFNEPPKLLLPFSVTERPIKAKSREIELSGRWNYSSSCNSMELSEGYEDDFDTESILD
                     EEIEKGIDSILGNSNSNSNFNSVVENDEILNEKSCLGFNYDFNHNTCYGYPLGLGFGG
                     NLEFNFGLGLRNGVKALRNVDDGNWWTNPEINMMNISSPASIKLKKAPIEKKKKVEEL
                     MKLKPESRKPVVKEEISGHGNGPRLLLKLNHDNVLSAWSDKGSPLPEEISGSESPGKD
                     IHARLAQIDLFSENGGLREASVIRYKEKKRSRLFSKKIRYHVRKVNADQRPRSKGRFV
                     RRSPTYEEQ"
     misc_feature    1380..1511
                     /gene="LOC139904076"
                     /note="CCT motif; Region: CCT; pfam06203"
                     /db_xref="CDD:461849"
ORIGIN      
        1 taggattcca ctatttttac ttcatattca acagttctaa tgaattttga atttgggttt
       61 ctcatttttt tttttttttt ttttacattt tatttaagtt ttccatataa atttattaaa
      121 atagatagtt gtagtaagtt cttgaatata ttcggctttt agtttttctt gtaaaaggtg
      181 ctaacttttt tattcttgaa ctcttgaatc caaaatttca taattcaatt ctgggttttg
      241 atgggttttt ctattttcta tatataatct tgaaaatttg agcaagtgaa tattgtgatt
      301 gagttgggtt tcttgaaatc ataaagatgt catcttgttt aagaggaggt acaggaagag
      361 catatggatt tgatcttgaa aatatagtta aatccacatc aaatacttca agtagaacct
      421 caaattcaca ttcatcttct ccatcttcaa cactttctga atcaagtaat tcaccattga
      481 ctgtctccac tcgaaaacct cgaacccaac gaaaacgacc caatcaaacc tacaatgaag
      541 cagctgctct tctatctacc gcttgcccca acattttttc aatcaccaag aaaaacaata
      601 atcattcaaa gtttccaaat aaacatactt atctcttcaa tgagccaccc aaattgctct
      661 taccgttttc ggtaaccgaa aggccaatta aggcgaaatc aagagaaatt gaactcagtg
      721 ggagatggaa ttatagctct agttgtaatt caatggaatt aagtgaagga tatgaagatg
      781 attttgatac tgagtcgatt cttgatgaag aaattgaaaa ggggattgat agtatcttgg
      841 ggaattcaaa ttctaattct aattttaatt cagtagtgga aaatgatgaa attttaaatg
      901 aaaaatcttg tttagggttt aattatgatt ttaatcataa tacttgttat gggtacccat
      961 tggggttggg atttgggggg aatttagagt ttaattttgg gttaggatta agaaatggtg
     1021 tgaaggcatt gaggaatgta gatgatggta attggtggac caatccagag atcaatatga
     1081 tgaacatttc gtcgccggca tcgataaaat tgaagaaagc tccaattgaa aagaagaaga
     1141 aagtggagga gttaatgaag ttgaaacccg aatctaggaa accagttgtt aaggaggaga
     1201 tttcgggtca tggaaacggg cctcgattgc tactgaaatt gaatcatgac aacgttttga
     1261 gtgcttggtc ggataaaggg tcgccgttgc cggaggaaat ttcagggtca gagtctccgg
     1321 gtaaagacat tcatgcaaga ttggctcaaa tagacttatt ttcggagaat ggagggttga
     1381 gagaggctag tgttattcgt tataaggaga agaagcgctc gaggttgttc tctaaaaaga
     1441 ttagatatca tgttagaaag gtcaatgctg atcaacgacc tagatctaag gggcgatttg
     1501 ttagaaggtc tcccacttat gaggaacaat gagaacttac aatttcgctt taccccctcc
     1561 atcttctgtt aactttctat cattcccttt acttcctttt ctatcatttc aaccctttta
     1621 ttcttttgtt ttggtacaat aatcaattag tgatgttgag ttgcatagaa gagaggataa
     1681 aatacaattt tgctatttag
//
LOCUS       XM_071886011            1177 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            bHLH35-like (LOC139904077), mRNA.
ACCESSION   XM_071886011
VERSION     XM_071886011.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1177
                     /gene="LOC139904077"
                     /note="transcription factor bHLH35-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904077"
     CDS             78..815
                     /gene="LOC139904077"
                     /codon_start=1
                     /product="transcription factor bHLH35-like"
                     /protein_id="XP_071742112.1"
                     /db_xref="GeneID:139904077"
                     /translation="MEDIGNEYKNYWETNMFLQNEEFDSWGGLEETFSGYYDSSSPDG
                     PQSSAASKNIVSERNRRKKLNDRLFALRAVVPNISKMDKASIIKDAIDYIQHLHDQER
                     IIQAEIMELESRKLEPGVFDYDQETVFMTSTEISKMNKPEQSLDSSESRVYPVEILEL
                     GLSYVGEKTVLVSLKCRKRRDTMVKICEVFESLKLNVVTANITAFSDTLFKTLFIQAD
                     EEEIDVLKIQIHTAISALNDPPSPMST"
     misc_feature    216..419
                     /gene="LOC139904077"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     Region: bHLH_SF; cl00081"
                     /db_xref="CDD:469605"
     misc_feature    order(246..251,255..257,270..272,321..326)
                     /gene="LOC139904077"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     misc_feature    order(264..269,276..281,285..290,300..302,324..329,
                     336..341,348..350,354..359,366..371)
                     /gene="LOC139904077"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:381392"
ORIGIN      
        1 cactacaaaa acaacctttc ggccttttct ccataaatct cacaccattt tcaaattctg
       61 ttggagcaac acaatccatg gaagacattg gtaatgaata caagaattat tgggaaacta
      121 atatgtttct ccaaaatgaa gaattcgata gttggggtgg actagaagaa acgttttcgg
      181 gctactacga ttcgagttct ccagacggac cacaatcatc ggcagcatct aaaaacattg
      241 tttcagagag aaataggaga aagaagctga atgataggtt gtttgccctt agagcagtgg
      301 tccccaacat aagtaagatg gataaagcat ccattattaa agatgcaatt gattacattc
      361 aacatttaca tgatcaagag aggattattc aagccgaaat catggaactt gagtcacgaa
      421 aattggaacc aggggtgttc gattatgatc aagagacggt atttatgaca tcaaccgaaa
      481 tatcaaaaat gaataaaccc gaacaatctc ttgattcaag tgaatcgaga gtgtatccag
      541 ttgaaattct tgaattagga ttatcatatg tgggagagaa gacagtgtta gtgagcctaa
      601 aatgtagaaa aagaagagat acaatggtga agatttgtga ggtttttgaa tctttgaagc
      661 tcaatgttgt tactgctaac atcactgctt tttctgatac ccttttcaag actctcttca
      721 ttcaggctga cgaagaagaa atagacgtgt tgaagataca aattcataca gcgatatcag
      781 ccctaaatga cccaccaagt ccaatgagca cctagtgtcc tcttttcctt tcggttttct
      841 gaactttcat cagactaaac gagtcaaaca cagggttttt tccgaaaggt agtcacattg
      901 acccaaatac tctactgaaa cccggacgaa attcaaaaga cgatgtaaac accccctttg
      961 tcatttacct ttttgccctt tgcgataaag gagagctttt cttcttgatt tttcctggtt
     1021 tgtttttaaa ctaaaaaggt tgctttagcc tagagcatat cgataagatt atctcttact
     1081 atcttttcac tatggaattt gtatctgttt tatgttatat tatgttaact atgtagaatt
     1141 tgtatactgt tatatattat attgtgttaa atctgta
//
LOCUS       XM_071886012             583 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904078), mRNA.
ACCESSION   XM_071886012
VERSION     XM_071886012.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..583
                     /gene="LOC139904078"
                     /note="uncharacterized LOC139904078; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139904078"
     CDS             83..430
                     /gene="LOC139904078"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742113.1"
                     /db_xref="GeneID:139904078"
                     /translation="MPTLNLFTNIPVDPVIASDILKDATKVVAKIIGKPESYVMIVLN
                     GGVPIAFAGTEEPAAYGEVISIGGLNSTVNGKLSSTIAEILETKLSIDSSRFYIKFYD
                     VERSFFGFNGSTF"
     misc_feature    83..427
                     /gene="LOC139904078"
                     /note="4-Oxalocrotonate Tautomerase: Catalyzes the
                     isomerization of unsaturated ketones. The structure is a
                     homohexamer that is arranged as a trimer of dimers. The
                     hexamer contains six active sites, each formed by residues
                     from three monomers, two from one...; Region:
                     4Oxalocrotonate_Tautomerase; cl00235"
                     /db_xref="CDD:444774"
     polyA_site      583
                     /gene="LOC139904078"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcgatttaa cttggaaatt ttaaggccac ccgtttaccc aataacttct tagacgccca
       61 aaaacttaag agcaaaagta agatgccaac gttgaatctg ttcactaata ttccagttga
      121 tccagtaatt gcgtctgaca tccttaaaga tgccactaaa gttgttgcaa agatcatcgg
      181 aaagcctgaa tcttatgtta tgattgtgct aaatggaggt gtaccaatag cgtttgctgg
      241 cactgaagaa cctgctgcat atggagaagt tatttctatt gggggcctta actctactgt
      301 taatggcaag ttgagttcaa ccattgccga aattcttgaa acaaaacttt ctattgatag
      361 ttcgcgtttc tatatcaaat tctatgatgt tgagcgctcg ttttttggat ttaatgggtc
      421 gacattctaa gtggaacctc gttgcaaaga acatgtaacc gatttatgct tttatggtac
      481 tcatgattgg acaaagtaga tatttattct tatgttgtat cttagtgtaa cggattaagg
      541 ttggttttca tttacttaaa tgtatctgtg gaaaatttga ata
//
LOCUS       XM_071886013            3036 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SMAX1-LIKE 4-like
            (LOC139904079), mRNA.
ACCESSION   XM_071886013
VERSION     XM_071886013.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3036
                     /gene="LOC139904079"
                     /note="protein SMAX1-LIKE 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139904079"
     CDS             1..3036
                     /gene="LOC139904079"
                     /codon_start=1
                     /product="protein SMAX1-LIKE 4-like"
                     /protein_id="XP_071742114.1"
                     /db_xref="GeneID:139904079"
                     /translation="MRSGGCTVQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATL
                     LMSSRASILRRACIKSQSQNNNNNSTPVPPPLHCRALELCFNVALNRLPTTPGPLLHG
                     QPSLSNALIAALKRAQAHQRRGCIENQQTLSQQQCQQQQQQSPPLLAIKVELEQLILS
                     ILDDPSVSRVMREAGFSSTAVKINLEENSLTSAPRMFFGSSVGGVYSSPSSPNSDHHP
                     HYQNPNFWQTHFLNHSPEQNPLLVSPKKKNPCQEFESLKKDVTLVMEVLTGKKSRKNT
                     VIIGDSLSVTEAVVIELMGKVERGDVPDELKCAHFIKFQFSSVPLRFMKREEVEMNLA
                     DLKRKIEALSLTGGGVIIYAGDLKWTVDEKENGVIGYSPVDHLVVEIGRLMSQYNVTN
                     KVWLIGTANYQTFMKCKMKQPSLELQWGLQAVSVPSGGLGLSLNANATSISGHEPKVS
                     MSCKEEGDDGVLEMSSCCAECNSNYEKEAAASATSANNKPPTVLPFWLHPSTPSSTIH
                     KENLVELRRKWNRLCQSLHQGRHNLNKNFMNLPSVISNSSDYNPFWPNNTNHVKTTSS
                     ITFSDTLKQQNGIGERSYPRFRRQQSCHVDLSFSSMNHHKIDQEPNLDSLKSREDDKE
                     IKITLGLGNSASDLSKGQNLYKCLQDNVPWHSEKMHSIVEFLMNSSSSKGFKKDSWLL
                     IEGSDSIGKQRLAMAIAEAMFGSSDSLLCFSMRASIREHENLERALKDHENIVVLVDD
                     VDFGDGNFLKSISKGFEKRKFGENGQVIFILIKGDYIVDDKRSRISPVQMKLVVREIS
                     HNSEVDQKRKPIWDSDELSKRKVPRIEEGEIKKDLSRESSSNTLDLNIKAEAHDDENE
                     NPLEFSPNSSDLTREMDSSPRNPLGFLETVKARFAFDRSPARDSLMRETFLFKIKGVF
                     ELVFGGIEFDFRVEEMVLDEVLFGCGVYLNGLFEKWLKEIFQTSLEVVKNGGKKGVKK
                     MRVCLVIDVKEGGGIGIEENDEGFMGSNLPNKIKICFIM"
     misc_feature    34..>561
                     /gene="LOC139904079"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpA; COG0542"
                     /db_xref="CDD:440308"
     misc_feature    1927..2313
                     /gene="LOC139904079"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    order(2068..2076,2131..2133,2137..2142,2215..2220)
                     /gene="LOC139904079"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:410865"
ORIGIN      
        1 atgcgctcag gaggttgtac ggtacaacag acactaacaa ctgaggctgc ttctgtattg
       61 aagcactctc ttagccttgc aaggaggaga ggccatgctc aggtcactcc acttcatgtg
      121 gctgcaactc ttcttatgag ttcaagagca agtattttaa gaagagcttg cattaaatca
      181 caatcacaaa ataataataa caattctaca ccagtaccac caccacttca ttgtagggca
      241 cttgaacttt gtttcaatgt ggctcttaat aggcttccaa caacacctgg accacttctt
      301 catggtcaac cttcactatc taatgctctc attgctgcac ttaaaagagc tcaagcacat
      361 caaagaagag ggtgtattga gaatcaacaa actcttagtc aacaacaatg tcaacaacag
      421 caacaacaaa gtccaccttt gttagctatc aaggtagagc ttgaacagct tattttgtca
      481 attcttgatg atccaagtgt aagtagggtt atgagagaag ctggtttttc aagtactgct
      541 gtgaaaatca acttggaaga aaactcatta acatctgcac caagaatgtt ttttggaagt
      601 tctgtgggtg gtgtttactc atcaccttca tccccaaatt ctgatcatca ccctcattat
      661 caaaatccta acttttggca aacccatttc ttgaatcact cacctgaaca aaacccactt
      721 ttagtttcac ccaaaaagaa aaacccatgt caagaatttg aatctttaaa gaaagatgtc
      781 accttggtta tggaggtttt aacagggaaa aaatcaagaa aaaacacggt gattatcgga
      841 gattctctat ctgtaacgga agccgttgtg attgagctaa tggggaaggt agaaagagga
      901 gatgtaccag atgaattaaa gtgtgcacat tttataaagt ttcaattctc atctgtacct
      961 ttaaggttca tgaaaaggga agaagtggag atgaatttgg cagatttaaa aagaaaaatt
     1021 gaggcattat cattaacagg aggtggggta attatatatg caggtgactt gaaatggact
     1081 gttgatgaaa aagagaatgg agtgattggt tatagtcctg tagatcatct tgttgttgaa
     1141 attgggaggt tgatgtcaca atataatgtg actaataaag tttggttaat tgggacagca
     1201 aattatcaaa cttttatgaa atgtaaaatg aaacagcctt cacttgagct tcaatggggt
     1261 cttcaagctg tttctgttcc ttctggtgga cttggtttaa gtcttaatgc aaatgcaact
     1321 agcatcagtg ggcatgagcc aaaagtaagt atgtcatgta aagaagaagg agatgatggt
     1381 gtattggaga tgagttcatg ttgtgcagaa tgcaactcca attatgaaaa ggaggctgcc
     1441 gcttcagcca cgtcggcgaa taataagcca ccaactgtct taccgttttg gcttcatcct
     1501 tccacacctt catcaaccat tcacaaggaa aacttggttg agctgaggag gaagtggaac
     1561 agattatgcc aaagtctaca ccaaggaagg cataatctaa acaagaattt catgaatttg
     1621 ccatcagtga ttagcaactc ctctgattat aatccgtttt ggcctaataa tactaatcat
     1681 gtcaaaacca cttcatcgat cacttttagc gacacattga aacaacaaaa tggcattggg
     1741 gagcgttctt atccccgatt cagaagacaa caatcgtgtc atgttgatct cagttttagc
     1801 agcatgaatc atcacaagat cgatcaagaa ccaaatttgg attctctaaa aagtagggaa
     1861 gatgataagg agataaaaat cacacttggt cttgggaatt cggcctctga tttgtcaaaa
     1921 ggacaaaatt tatacaagtg tttgcaagac aatgtaccat ggcattcgga gaaaatgcac
     1981 tcgattgttg agtttttaat gaattcttcg tcgtctaaag gttttaagaa agattcttgg
     2041 cttttgattg aagggagcga ctccataggg aagcaacgat tggcaatggc gattgcagag
     2101 gctatgttcg gctcaagtga ctcgctttta tgctttagca tgagggcttc cattcgcgaa
     2161 catgaaaatc ttgaaagggc tttgaaagat catgaaaata ttgttgtttt ggttgatgat
     2221 gtggattttg gagatgggaa tttcttgaaa tctataagta aaggttttga gaaacggaaa
     2281 ttcggcgaaa atgggcaagt tatattcatt ttgattaagg gtgattatat tgtagatgac
     2341 aaaagaagcc gaatttcacc ggttcaaatg aaattagttg tgagggagat tagtcacaac
     2401 tctgaagttg atcaaaagcg aaaaccgata tgggattcag atgaattaag caagaggaaa
     2461 gttccaagaa tcgaagaggg cgaaattaag aaagatttgt ctagagaatc aagctcaaac
     2521 actcttgatc ttaatatcaa agccgaggca cacgatgatg agaacgaaaa cccgttagaa
     2581 ttcagcccaa attcgagtga tttgacccgt gaaatggata gtagtccaag gaacccactc
     2641 gggtttcttg aaacggtgaa agcccgattt gcatttgatc gatctccggc tcgagatagc
     2701 ttgatgagag agactttttt gttcaagata aaaggggtgt ttgagttagt ttttgggggt
     2761 atagaatttg attttagagt tgaggaaatg gtgttagatg aggttttgtt tgggtgtggg
     2821 gtatacttga atggtctgtt tgagaaatgg ctgaaagaga tttttcaaac aagcttagaa
     2881 gtggtgaaaa atgggggtaa aaaaggagta aaaaagatga gggtatgttt ggtaatagat
     2941 gtaaaagaag ggggtgggat tggtatagaa gaaaatgatg aggggttcat gggttcgaat
     3001 ctccctaaca aaatcaaaat atgtttcatt atgtag
//
LOCUS       XR_011778649            1681 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904080), transcript variant X1, ncRNA.
ACCESSION   XR_011778649
VERSION     XR_011778649.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1681
                     /gene="LOC139904080"
                     /note="uncharacterized LOC139904080; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904080"
     ncRNA           1..1681
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904080"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904080"
ORIGIN      
        1 aggaatgtac ataatgtgaa aactttacat gaatggaata tgcaaacata ctttatgttt
       61 tgttattgtg cgaagtatta atgctataaa cgattggatt tacattaaaa cttgcattgt
      121 gaattgcaga tggaccatcc ccttttaaca gttcgaattc tgggcctaaa gcacgttctt
      181 ttcctttttt gtactttaaa taaggagcca aaaacccatt taaacgttac atgctttaat
      241 gtttatacat gaggggaaat gggtgggtcg ttgatgtcaa aattactttt agtttgtgtt
      301 atttagtata atcactatca cttatgtttt gtttatcgtt tatgttcctt tttgctattt
      361 ttcgggattc ttctcattct tcataataaa tggtcacgag tagtaaaaat tatttctatg
      421 tccttatttc gatgtcctaa ctctctacaa ctgtaaaaat tgtgtgacaa gaattttgtt
      481 tatgatcagt tttttggatt ttgacatata aatgaatgta ttttataggg atgataggac
      541 gattgaatat accatcaagg taatgcaaga atgattataa accatcttta tatctaatat
      601 gcaccaattg cactaatttg tcgaccttat tgtcagctga aaatggctat tgagtttttt
      661 gattttgttt gtgagctgta tgtatatgca tcataacaaa tgaacttatg tataatggtg
      721 tatatgccgt tccaagtcaa cagaatacac ggtatatata tttagaggag gtacccgtga
      781 ttctcattta tactgttttg ctatattatt ctgtgattca tgatgtcctg tagagatcac
      841 attgattgtt aacaaattat ttactaagtt tgtccactca taatgaggtt cttatgagtt
      901 ggctgtccaa tgattttttt ttaatgtact ttaatgcaat ctgctaatta tattgatttg
      961 ttttaagtgt gctctgtatt gcagctgaat ttgacatgtt tccatataga cgtgattcga
     1021 ttgtataaca acttaatttg acagttgcag taggagaacc taacacaaaa aagatctcta
     1081 gtcaacaatt tctcgttcaa gagggagagg gaggcaagac tggcagaggg atgacaaaga
     1141 accaactata gctactttat attagtttag tgttttttag tttagaattc attcattgta
     1201 aatactttag taaatttaat ttggtatatt tgatgcattt tgtatttggc gggtgttatt
     1261 tgaaatattt gagattttaa tttatttggc gctagaaatt atttggcggt atttggcaag
     1321 tattatttaa agtattgcag ctgaatttga catgtttcca tgtagacgtg attcgattgt
     1381 ataacagctg aatttgacat gtttccatgt agacgtgatt cgattgtata acagctgaat
     1441 ttgacagttg cagtatgaga accaaacaca aaaagatctc tagtcaacaa tttctcgttc
     1501 aagatggaga gggaggcaag actggaagaa ggatgacaaa gaaccaacta tagctatttt
     1561 atattagttt agtgtttttt agtttataat tcatccattg taaatacttt agtaaattta
     1621 atttagtata tttgatgcat tttgtatttg gcgggtgtta tttgaaatat ttgagatttt
     1681 a
//
LOCUS       XR_011778650            1196 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904080), transcript variant X2, ncRNA.
ACCESSION   XR_011778650
VERSION     XR_011778650.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1196
                     /gene="LOC139904080"
                     /note="uncharacterized LOC139904080; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904080"
     ncRNA           1..1196
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904080"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904080"
ORIGIN      
        1 aactacgggc tcaaccaatt ccatccatcc cattctctaa agatccacat ccttttaaaa
       61 acaaattagg gttcataatc tagaatactt tatgtttaat ccgatcgttg tcgctacatt
      121 ccatccattc cattattcaa ttgcaaaaaa atattgtttt gaaccctaat ttgctatccc
      181 tgacgtttca atatttaaat tagggttcat aatctacaaa agtaaatgcg aaattggttg
      241 cggtatacta tgaattaggt ttcataatct acaaaactaa atgcgacatt ggattaaagc
      301 aagtggaaat caaaccgggt tacaaatttg aaaaatagcc ttcgaagtca aaacgcagta
      361 aaacaaaccc cgtcgatcga attctgatat aaatcaaaat tatttgacct catccacttc
      421 agctgaattt gacatgtttc catatagacg tgattcgatt gtataacaac ttaatttgac
      481 agttgcagta ggagaaccta acacaaaaaa gatctctagt caacaatttc tcgttcaagg
      541 tatcttaaat atcctttcta agtacaaagc attacataac taaacatgtg aaattatttt
      601 ataatgttgt tggcagaggg agagggaggc aagactggca gagggatgac aaagaaccaa
      661 ctatagctac tttatattag tttagtgttt tttagtttag aattcattca ttgtaaatac
      721 tttagtaaat ttaatttggt atatttgatg cattttgtat ttggcgggtg ttatttgaaa
      781 tatttgagat tttaatttat ttggcgctag aaattatttg gcggtatttg gcaagtatta
      841 tttaaagtat tgcagctgaa tttgacatgt ttccatgtag acgtgattcg attgtataac
      901 agctgaattt gacatgtttc catgtagacg tgattcgatt gtataacagc tgaatttgac
      961 agttgcagta tgagaaccaa acacaaaaag atctctagtc aacaatttct cgttcaagat
     1021 ggagagggag gcaagactgg aagaaggatg acaaagaacc aactatagct attttatatt
     1081 agtttagtgt tttttagttt ataattcatc cattgtaaat actttagtaa atttaattta
     1141 gtatatttga tgcattttgt atttggcggg tgttatttga aatatttgag atttta
//
LOCUS       XR_011778651            1136 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904080), transcript variant X3, ncRNA.
ACCESSION   XR_011778651
VERSION     XR_011778651.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1136
                     /gene="LOC139904080"
                     /note="uncharacterized LOC139904080; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904080"
     ncRNA           1..1136
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904080"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904080"
ORIGIN      
        1 aactacgggc tcaaccaatt ccatccatcc cattctctaa agatccacat ccttttaaaa
       61 acaaattagg gttcataatc tagaatactt tatgtttaat ccgatcgttg tcgctacatt
      121 ccatccattc cattattcaa ttgcaaaaaa atattgtttt gaaccctaat ttgctatccc
      181 tgacgtttca atatttaaat tagggttcat aatctacaaa agtaaatgcg aaattggttg
      241 cggtatacta tgaattaggt ttcataatct acaaaactaa atgcgacatt ggattaaagc
      301 aagtggaaat caaaccgggt tacaaatttg aaaaatagcc ttcgaagtca aaacgcagta
      361 aaacaaaccc cgtcgatcga attctgatat aaatcaaaat tatttgacct catccacttc
      421 agttgcagta ggagaaccta acacaaaaaa gatctctagt caacaatttc tcgttcaagg
      481 tatcttaaat atcctttcta agtacaaagc attacataac taaacatgtg aaattatttt
      541 ataatgttgt tggcagaggg agagggaggc aagactggca gagggatgac aaagaaccaa
      601 ctatagctac tttatattag tttagtgttt tttagtttag aattcattca ttgtaaatac
      661 tttagtaaat ttaatttggt atatttgatg cattttgtat ttggcgggtg ttatttgaaa
      721 tatttgagat tttaatttat ttggcgctag aaattatttg gcggtatttg gcaagtatta
      781 tttaaagtat tgcagctgaa tttgacatgt ttccatgtag acgtgattcg attgtataac
      841 agctgaattt gacatgtttc catgtagacg tgattcgatt gtataacagc tgaatttgac
      901 agttgcagta tgagaaccaa acacaaaaag atctctagtc aacaatttct cgttcaagat
      961 ggagagggag gcaagactgg aagaaggatg acaaagaacc aactatagct attttatatt
     1021 agtttagtgt tttttagttt ataattcatc cattgtaaat actttagtaa atttaattta
     1081 gtatatttga tgcattttgt atttggcggg tgttatttga aatatttgag atttta
//
LOCUS       XM_071886014            1313 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904081), transcript variant X1, mRNA.
ACCESSION   XM_071886014
VERSION     XM_071886014.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1313
                     /gene="LOC139904081"
                     /note="uncharacterized LOC139904081; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904081"
     CDS             95..1027
                     /gene="LOC139904081"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742115.1"
                     /db_xref="GeneID:139904081"
                     /translation="MTSTNGQIVSITPETKEILHQSILHYLHRNGFSKTFKRFQSESH
                     IKDDTWKASTANLEDIYCKYVNARSCQDEDNVVVETETKEKKKKKKKNKLELASGDEN
                     KETNSDLSKKPVSDTTNELEVKESEKKPKDKKRKSKEQDVCTKENGNVNPDVANEEKK
                     SSKKRKRLVSDESERQSAKIETNQTVDESDALVTSDKDLNEKSEMDGKKTGSQKSGKK
                     QRIESAEPKTVNAFQRVKIDQVEFAHEKLQDNSYWAKDGADIGYGAKAQEVLGQVRGR
                     DFRHEKTKKKRGSYRGGQIDLQSHSIKFDYSDQE"
     misc_feature    140..235
                     /gene="LOC139904081"
                     /note="Lissencephaly type-1-like homology motif; Region:
                     LisH; smart00667"
                     /db_xref="CDD:128913"
     misc_feature    788..1006
                     /gene="LOC139904081"
                     /note="SRP40, C-terminal domain; Region: SRP40_C;
                     pfam05022"
                     /db_xref="CDD:461525"
ORIGIN      
        1 aaaacttctt ttgctcctgg taggcgccct gaaaaagcat tatttcatac aaaccctagc
       61 atcacactga ttcataacat taattagggg caagatgaca agtacaaacg gccaaatcgt
      121 atcaataaca ccggaaacta aagaaatact tcaccaatcc atccttcact accttcatcg
      181 caacggcttc tccaaaacct tcaaacgatt tcagtccgag tctcacatta aggatgacac
      241 atggaaagct tctacagcta atttagagga catttactgc aaatacgtaa atgcacgtag
      301 ttgtcaagat gaagataatg tagttgttga aactgaaact aaagaaaaaa agaagaagaa
      361 gaagaaaaac aaacttgagt tagcttctgg ggatgaaaat aaagaaacaa attcagattt
      421 atcgaagaag cctgtaagtg atactacaaa cgagttggag gtaaaggaat cagagaaaaa
      481 acccaaagat aagaagagaa agagcaaaga acaagacgta tgcactaaag aaaatggcaa
      541 cgttaatccc gatgtggcta atgaagagaa aaagagttct aagaaaagga aacgattggt
      601 atctgatgaa agtgagcgtc agtcagcaaa gattgaaact aatcaaactg ttgatgagag
      661 tgacgcactt gtaacatctg ataaggattt aaatgagaaa tcggagatgg atggaaagaa
      721 aactggatct cagaaatcag ggaaaaaaca gcgaattgaa tcagctgagc caaagacggt
      781 gaatgcattt caaagggtga aaattgatca agtggaattt gctcatgaga aattgcaaga
      841 taattcgtac tgggcgaagg atggtgcaga tattggatat ggtgctaaag cacaagaagt
      901 tcttggtcaa gtgagaggaa gggactttcg tcatgagaag acaaaaaaga agcgtggaag
      961 ctacagagga ggtcaaatag atttgcagtc acattcaatt aagtttgatt actccgatca
     1021 agagtgacct cacagtgatt gctatgtgtc aaagcactgt tcattgttag gtccaatatt
     1081 gggccttttt tatcaaccag atgatacacc acaattttga ttcagattca agtgtaatct
     1141 taaatcttat tgatccgtca caatgctact tgtctttgtt ttttcacata catttgtacg
     1201 ttgatgaatt tgtttacaag gtcttttcgt tgtatgtgtt atacctaaaa ccgtatatta
     1261 cagtgtgatt gaactatcag gtgttgtacc aacatttaaa atgtcaaatt tga
//
LOCUS       XM_071886015            1310 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904081), transcript variant X2, mRNA.
ACCESSION   XM_071886015
VERSION     XM_071886015.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1310
                     /gene="LOC139904081"
                     /note="uncharacterized LOC139904081; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904081"
     CDS             95..1024
                     /gene="LOC139904081"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742116.1"
                     /db_xref="GeneID:139904081"
                     /translation="MTSTNGQIVSITPETKEILHQSILHYLHRNGFSKTFKRFQSESH
                     IKDDTWKASTANLEDIYCKYVNARCQDEDNVVVETETKEKKKKKKKNKLELASGDENK
                     ETNSDLSKKPVSDTTNELEVKESEKKPKDKKRKSKEQDVCTKENGNVNPDVANEEKKS
                     SKKRKRLVSDESERQSAKIETNQTVDESDALVTSDKDLNEKSEMDGKKTGSQKSGKKQ
                     RIESAEPKTVNAFQRVKIDQVEFAHEKLQDNSYWAKDGADIGYGAKAQEVLGQVRGRD
                     FRHEKTKKKRGSYRGGQIDLQSHSIKFDYSDQE"
     misc_feature    140..235
                     /gene="LOC139904081"
                     /note="Lissencephaly type-1-like homology motif; Region:
                     LisH; smart00667"
                     /db_xref="CDD:128913"
     misc_feature    785..1003
                     /gene="LOC139904081"
                     /note="SRP40, C-terminal domain; Region: SRP40_C;
                     pfam05022"
                     /db_xref="CDD:461525"
ORIGIN      
        1 aaaacttctt ttgctcctgg taggcgccct gaaaaagcat tatttcatac aaaccctagc
       61 atcacactga ttcataacat taattagggg caagatgaca agtacaaacg gccaaatcgt
      121 atcaataaca ccggaaacta aagaaatact tcaccaatcc atccttcact accttcatcg
      181 caacggcttc tccaaaacct tcaaacgatt tcagtccgag tctcacatta aggatgacac
      241 atggaaagct tctacagcta atttagagga catttactgc aaatacgtaa atgcacgttg
      301 tcaagatgaa gataatgtag ttgttgaaac tgaaactaaa gaaaaaaaga agaagaagaa
      361 gaaaaacaaa cttgagttag cttctgggga tgaaaataaa gaaacaaatt cagatttatc
      421 gaagaagcct gtaagtgata ctacaaacga gttggaggta aaggaatcag agaaaaaacc
      481 caaagataag aagagaaaga gcaaagaaca agacgtatgc actaaagaaa atggcaacgt
      541 taatcccgat gtggctaatg aagagaaaaa gagttctaag aaaaggaaac gattggtatc
      601 tgatgaaagt gagcgtcagt cagcaaagat tgaaactaat caaactgttg atgagagtga
      661 cgcacttgta acatctgata aggatttaaa tgagaaatcg gagatggatg gaaagaaaac
      721 tggatctcag aaatcaggga aaaaacagcg aattgaatca gctgagccaa agacggtgaa
      781 tgcatttcaa agggtgaaaa ttgatcaagt ggaatttgct catgagaaat tgcaagataa
      841 ttcgtactgg gcgaaggatg gtgcagatat tggatatggt gctaaagcac aagaagttct
      901 tggtcaagtg agaggaaggg actttcgtca tgagaagaca aaaaagaagc gtggaagcta
      961 cagaggaggt caaatagatt tgcagtcaca ttcaattaag tttgattact ccgatcaaga
     1021 gtgacctcac agtgattgct atgtgtcaaa gcactgttca ttgttaggtc caatattggg
     1081 ccttttttat caaccagatg atacaccaca attttgattc agattcaagt gtaatcttaa
     1141 atcttattga tccgtcacaa tgctacttgt ctttgttttt tcacatacat ttgtacgttg
     1201 atgaatttgt ttacaaggtc ttttcgttgt atgtgttata cctaaaaccg tatattacag
     1261 tgtgattgaa ctatcaggtg ttgtaccaac atttaaaatg tcaaatttga
//
LOCUS       XM_071886016            1011 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            MBR1-like (LOC139904083), mRNA.
ACCESSION   XM_071886016
VERSION     XM_071886016.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1011
                     /gene="LOC139904083"
                     /note="E3 ubiquitin-protein ligase MBR1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904083"
     CDS             41..889
                     /gene="LOC139904083"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase MBR1-like"
                     /protein_id="XP_071742117.1"
                     /db_xref="GeneID:139904083"
                     /translation="MENTIPENAKQRTPRINSESREGVARRKKVFGFLSMGCGRISSP
                     AVAVVLPEKTRRRKKNSKKKKQRKNRGACSENVCCTPPGIGFAYDVAQSTSSDAHRRN
                     HRQRSSNTRQVTDSEQQWRTTQVNDATFVRSNISDSRQFNRSQNRSHGQISEIVMVEH
                     DPLLEGRLEGSDRFGAWRINADLMSYEELVELSERIGFVDGGLLEEEILDCLKRPKKS
                     FFKSLDFKTKVKDSKCSICQEECKGYEDLGKLECGHYHHLDCIKQWLLRKNECPICKT
                     VAKPNK"
     misc_feature    731..874
                     /gene="LOC139904083"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(740..742,749..751,794..796,800..802,809..811,
                     818..820,851..853,860..862)
                     /gene="LOC139904083"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438111"
ORIGIN      
        1 atcacataat ttcacattat tcaaaattct ctctgaataa atggaaaata caattcctga
       61 aaatgcaaaa cagaggacac caagaatcaa ttccgaatcc agggagggtg ttgctcgccg
      121 gaaaaaggtg tttggatttt tgagtatggg ttgcggccgg atatcgtctc cggcggtggc
      181 ggtggttttg ccagagaaaa cgaggcgaag gaaaaagaat agtaagaaga aaaaacagag
      241 gaaaaacagg ggagcatgtt cggagaatgt atgttgtact cctcctggta ttggatttgc
      301 atatgatgtt gcacaaagta caagttctga tgcgcataga agaaaccata gacagcgatc
      361 tagtaacaca aggcaagtta cggattctga acaacaatgg cgtactacac aagtcaatga
      421 tgccactttt gtaagatcaa atatatctga ttctagacaa tttaaccgtt cacaaaatcg
      481 ttctcatgga caaatctccg agattgttat ggtcgaacat gatcctttgt tggaagggag
      541 attagaagga agtgatcggt ttggagcatg gcgaatcaat gcagacctca tgtcatatga
      601 ggagctggtg gaattaagtg agcgaattgg gtttgtcgat ggcggtttgc tagaagaaga
      661 aatacttgat tgtttgaaac gacctaagaa gtcgtttttt aagtcccttg actttaaaac
      721 caaagtcaaa gactcaaaat gtagcatatg tcaagaagaa tgtaaaggat acgaagattt
      781 gggaaaactc gaatgtgggc attaccatca tctagattgc atcaaacaat ggcttcttag
      841 gaagaatgaa tgtccgattt gcaaaaccgt ggctaaacct aataagtgat cgactactat
      901 gttgaagaga agctttcgga ttttgtttaa ggcaattata tgtatacatg ttagctatta
      961 acaagtgatt ttgttctagc cttttatgtt atagctgttg ttgctgtttg t
//
LOCUS       XM_071886017             880 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable WRKY transcription
            factor 11 (LOC139904084), mRNA.
ACCESSION   XM_071886017
VERSION     XM_071886017.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..880
                     /gene="LOC139904084"
                     /note="probable WRKY transcription factor 11; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139904084"
     CDS             23..796
                     /gene="LOC139904084"
                     /codon_start=1
                     /product="probable WRKY transcription factor 11"
                     /protein_id="XP_071742118.1"
                     /db_xref="GeneID:139904084"
                     /translation="MAVDLVGIQAIQHLNRIFQNHDFTVSSDFKQAVSALKRRGHARF
                     RRGPSPSSSDQHAPSISSQSEEKLLKQSPVNDTTPSFHFMTSSPVLSSAEESVSNGKQ
                     FSSLGIVSLPLSFSSRKPPLPSSHRKRVSTDSASVSVHGSKGENNSVSRSSCHCCKRR
                     KTETKRRVKKILITGSKVDSIPADNYSWKKYGEKKVDGLPFPRVYYKCNSSKGCPARK
                     RVELGVTDSRMLIVTYDREHRHQHTPTPLPTSFTGLQIQ"
     misc_feature    572..742
                     /gene="LOC139904084"
                     /note="WRKY DNA -binding domain; Region: WRKY; pfam03106"
                     /db_xref="CDD:460808"
ORIGIN      
        1 ctgatctcaa attcaaacaa caatggcggt tgatttagta ggaattcaag ccattcaaca
       61 tctgaatcgc atttttcaga atcatgattt caccgtttca tctgatttca agcaagctgt
      121 ttctgcattg aaacgtaggg gtcacgcgcg ttttcgccga ggaccttcac cgtcttcctc
      181 cgatcaacat gcgccgtcga tttcatcaca atcggaagag aaactgctaa aacagtcacc
      241 tgttaatgat acaacgccgt cgtttcactt tatgacgtca tctcctgtat tatcgtctgc
      301 cgaagaaagc gtttcaaacg gaaaacagtt ttcgtcatta ggtatagtat ctctgccgct
      361 gtcattttcg tcgagaaaac cgccgcttcc atcatctcac cggaaacgag tcagcaccga
      421 tagtgcatct gtttccgtac acggatctaa aggagagaat aattcggttt cgcgctctag
      481 ttgccattgc tgtaaaagaa ggaaaacgga aacgaaacgg agagttaaaa aaattctgat
      541 aaccggatct aaagtggata gtataccggc tgataattac tcatggaaga aatacggtga
      601 gaagaaagta gacggattac cgtttccaag agtttattac aaatgtaatt catcaaaagg
      661 atgtcctgca aggaaacgag tagagttagg agtaacggat tcgaggatgc ttattgtaac
      721 atatgataga gaacaccgtc atcaacatac gccgacgccg ttacctacaa gttttactgg
      781 tttacaaatt cagtagggtt ttaaaaaatg agatgttgtt tgtaaattaa ttgaagttaa
      841 aggttgtaaa atgtaaagag aaaaagaggg aagcctcaca
//
LOCUS       XM_071886018            3104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides villin-5-like
            (LOC139904085), transcript variant X1, mRNA.
ACCESSION   XM_071886018
VERSION     XM_071886018.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3104
                     /gene="LOC139904085"
                     /note="villin-5-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139904085"
     CDS             1..2895
                     /gene="LOC139904085"
                     /codon_start=1
                     /product="villin-5-like isoform X1"
                     /protein_id="XP_071742119.1"
                     /db_xref="GeneID:139904085"
                     /translation="MSVSMKEVDPAFQGAGRKPGIEVWRIENSNPVAVPEASYGKFFT
                     GETYMILKTSPSKSGTFRYDIHYWVGKDASEGEAGIVAIKTLELDAAVGGRAVQYREL
                     QGHESDRFLSCFKPCIIPEETEPQEHKNRMFVCKGKHVVHVQEVPLARSSLNHDAICI
                     LDSKNKIFQFNGSNTLIQERAKALEVVKYIRDTYHRSKCDMATIEDGMLMGDAEAGEF
                     WGFFGGFAPLPKKTATNDAQSTDTFPNQLFCVNKGKAERVAADSLTKKLLDTHKCYFL
                     DCGSEIYVWVGRSTPFDERKAANGAAEEHLRDQERPKSKIIRMIENFETVSFRSKFNS
                     WPQPGDVVASEEGRGKVAALLKRQGLDVKGLVKGAPEKEEQQEDPEPYIDCSGTLQVW
                     CVNGQEKSLLSETDQSKLYTGDCYIFQYTYSGDEQEECLIGTWFGKKSVTEDKDSAHS
                     QASKMIESVKFLATQARIYEGHEPLLFKAIFQSFMILKGGLSNGYKKYISDKGLPDDT
                     YKEDGIALFRVQGSGPENMQSIQVEPVASSLNSCYCYILHKDSLVFTWNGRQTTVDDQ
                     ELAERQLDLIKPDLQTRVHKEGAESDQFWEILGGKKEYSAQKIPTETESDPHLFSCTL
                     SKGYMKVTEIYNFDQDDLLTEDVYILDCHTSIFLWVGQEFHLKTKTQVLPIGEKFINR
                     DVLLEKLSLQTPIFILMEASEPPFFTRFFKWDSKKAAMHGNSFQRRLSLIKDGGLSTM
                     NLKPKKRAPVSFGGRSASEKPQRSRSVSVSSDRPRARGRSPAFNALASKFDNPGGRNL
                     STPPPQLNKLYAKSGGTTETGGGGGGGSFDTSRVLSKSRAIASLTASFDKPTREKLMP
                     RSVKVSSDSTAKSELNSKVNVASSRKEPLPEKEDVKKNEAEDEEGVTVYPYDRITTSS
                     TNPAPDIDVTKREVYLSKAEFKEKFNMTKEAFNKMPKWRQNKMKISLNLF"
     misc_feature    34..366
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S1_like; cd11290"
                     /db_xref="CDD:200446"
     misc_feature    order(85..90,205..207,223..228,232..240,244..252,256..261,
                     292..294,298..300)
                     /gene="LOC139904085"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200446"
     misc_feature    391..621
                     /gene="LOC139904085"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; Region: ADF_gelsolin; cl15697"
                     /db_xref="CDD:472830"
     misc_feature    733..1002
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S3_like; cd11292"
                     /db_xref="CDD:200448"
     misc_feature    order(985..987,1000..1002)
                     /gene="LOC139904085"
                     /note="putative nucleotide binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:200448"
     misc_feature    1141..1443
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S4_like; cd11293"
                     /db_xref="CDD:200449"
     misc_feature    order(1189..1194,1306..1308,1324..1329,1333..1341,
                     1345..1353,1357..1362,1393..1395,1399..1401)
                     /gene="LOC139904085"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1414..1416
                     /gene="LOC139904085"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1534..1809
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S5_like; cd11288"
                     /db_xref="CDD:200444"
     misc_feature    1558..1560
                     /gene="LOC139904085"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200444"
     misc_feature    1846..2145
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 6-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S6_like; cd11291"
                     /db_xref="CDD:200447"
     misc_feature    2785..2892
                     /gene="LOC139904085"
                     /note="Villin headpiece domain; Region: VHP; pfam02209"
                     /db_xref="CDD:460493"
ORIGIN      
        1 atgtctgttt ctatgaaaga agttgatcca gcctttcaag gagctgggcg aaaaccagga
       61 attgaggtat ggcgtatcga gaattctaac ccggtagctg tcccagaggc ttcttatggt
      121 aaatttttta caggggaaac ctatatgata ttaaagacca gtccttcaaa aagtggcacc
      181 ttccgctatg acattcatta ctgggtaggt aaagatgcaa gtgagggtga agctggaatt
      241 gtagccataa aaacgcttga actagatgca gctgttggag gacgagctgt tcagtaccgt
      301 gaattacaag gtcatgaaag tgacagattt ctatcttgct ttaaaccatg tattatacct
      361 gaagaaactg aacctcaaga acacaaaaat cgcatgtttg tttgcaaagg aaagcacgtg
      421 gttcatgtac aagaggttcc tttggctcga tcttcactca accatgatgc catctgtata
      481 ttagacagta aaaataagat ttttcagttc aatgggtcaa atactttgat acaagaaagg
      541 gctaaagcat tagaagttgt gaaatatatt agagatactt accatcgttc gaaatgtgat
      601 atggctacaa ttgaggatgg gatgctgatg ggtgatgctg aagctggtga attttggggt
      661 ttctttggtg gatttgcacc tcttccaaag aaaaccgcaa ccaatgatgc tcaaagtacc
      721 gacacttttc ctaatcagct attttgtgtg aacaaaggga aggcagaacg tgttgcggct
      781 gattcgttga caaagaaact actagataca cacaaatgct attttctgga ctgcggatca
      841 gaaatttatg tgtgggtggg acgaagtact ccttttgatg aacggaaagc tgcaaatgga
      901 gctgcagaag aacatctacg tgaccaggaa aggccaaaat ctaagataat ccgcatgatt
      961 gagaattttg agacggtatc ttttcggtca aagttcaatt cgtggcctca acctggtgat
     1021 gtggtagcat ctgaggaggg tagaggcaag gtggctgcac tcttaaaacg ccaagggctc
     1081 gatgttaagg gtttggttaa aggtgctccc gaaaaggaag aacaacagga ggaccctgaa
     1141 ccgtatatag attgcagtgg aaccttgcag gtgtggtgtg tgaatggtca agagaagagt
     1201 ctcttgtcag aaacggatca gtcaaaactt tacaccggag attgctatat ctttcaatat
     1261 acgtactctg gagacgaaca agaagagtgc cttataggga cgtggtttgg aaagaaaagt
     1321 gtaacggaag ataaggattc agctcactca caggcaagca agatgattga gtcagtcaag
     1381 ttcttggcaa ctcaggcacg tatatatgaa ggacatgaac ctttactttt caaagcgata
     1441 tttcagagtt ttatgattct caagggtggt ctcagtaatg gatacaagaa gtacatatca
     1501 gataagggat taccagatga tacctataaa gaagatggaa tcgcactatt tcgagttcaa
     1561 ggttctggac cagaaaacat gcaatcaata caagttgaac ctgttgcttc gtccttgaac
     1621 tcctgctact gttacatatt acacaaggat tcactcgtct ttacatggaa cgggaggcaa
     1681 actaccgttg atgaccaaga acttgctgag agacaactgg atctcataaa gcccgatttg
     1741 caaaccagag ttcataagga gggtgcagag tctgatcagt tttgggaaat tttgggtggg
     1801 aaaaaagaat attctgctca aaagattcca acggagactg aaagtgatcc tcatttgttc
     1861 tcatgcacat tgtccaaagg ttatatgaag gtgactgaga tatacaactt tgatcaggat
     1921 gatttgttga cagaagatgt atatatcctt gactgtcaca caagcatctt tctttgggta
     1981 gggcaagagt ttcatttaaa gaccaaaaca caagtattac ctatcggcga gaaatttatc
     2041 aatcgtgatg ttcttcttga gaaattatct cttcaaactc ctatatttat cttaatggaa
     2101 gcaagtgagc cgccattctt cacacgtttc ttcaaatggg attcaaaaaa ggctgcaatg
     2161 catggaaact cattccaaag gcgactctct cttataaaag acggagggct gtcaactatg
     2221 aatcttaaac cgaaaaagag agcaccggta tcatttggag gacggtcagc gtctgaaaaa
     2281 ccacaacggt caaggagtgt gtcagtcagc tctgaccgac cacgtgcccg gggcagatct
     2341 ccagccttca atgcccttgc ttccaagttt gataatccag gtggacggaa tctttcgact
     2401 cctccaccac agctaaacaa gctttatgcc aaatctggag gcactactga aactggtggt
     2461 ggtggtggtg gcggcagttt tgatacgtct agagttcttt ccaagtccag ggctatagca
     2521 tcactaaccg cctcttttga caaaccaaca cgagaaaaac ttatgccccg ttctgttaaa
     2581 gtgagttccg attcaactgc aaaatctgag ctgaactcca aggttaacgt agcgagcagt
     2641 agaaaggagc cattaccaga gaaggaagat gtaaaaaaga atgaggctga agatgaggaa
     2701 ggtgtcacag tgtacccata tgatcgtata acaacatcat caactaaccc tgctccagat
     2761 attgatgtaa ccaaacgaga ggtgtatctg tcgaaggctg agtttaagga gaagtttaat
     2821 atgacgaaag aggctttcaa caagatgcca aaatggagac aaaataagat gaaaatttca
     2881 cttaatcttt tctgagtcat ctgcacttcg tttcagtgac atatgaagga aagcacttaa
     2941 tctaacatcc ttttgatcaa ctgattagca gctcttcatc tgaaacccat aaattactct
     3001 taacgtatgc agttttttta atatgttgca gctgatccat tttttattct tccactagtc
     3061 tgatatgata taggggtccg cattattcta ggactagtta ccac
//
LOCUS       XM_071886019            3107 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides villin-5-like
            (LOC139904085), transcript variant X2, mRNA.
ACCESSION   XM_071886019
VERSION     XM_071886019.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3107
                     /gene="LOC139904085"
                     /note="villin-5-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139904085"
     CDS             1..2898
                     /gene="LOC139904085"
                     /codon_start=1
                     /product="villin-5-like isoform X2"
                     /protein_id="XP_071742120.1"
                     /db_xref="GeneID:139904085"
                     /translation="MSVSMKEVDPAFQGAGRKPGIEVWRIENSNPVAVPEASYGKFFT
                     GETYMILKTSPSKSGTFRYDIHYWVGKDASEGEAGIVAIKTLELDAAVGGRAVQYREL
                     QGHESDRFLSCFKPCIIPEETEPQEHKNRMFVCKGKHVVHVQEVPLARSSLNHDAICI
                     LDSKNKIFQFNGSNTLIQERAKALEVVKYIRDTYHRSKCDMATIEDGMLMGDAEAGEF
                     WGFFGGFAPLPKKTATNDAQSTDTFPNQLFCVNKGKAERVAADSLTKKLLDTHKCYFL
                     DCGSEIYVWVGRSTPFDERKAANGAAEEHLRDQERPKSKIIRMIENFETVSFRSKFNS
                     WPQPGDVVASEEGRGKVAALLKRQGLDVKGLVKGAPEKEEQQEDPEPYIDCSGTLQVW
                     CVNGQEKSLLSETDQSKLYTGDCYIFQYTYSGDEQEECLIGTWFGKKSVTEDKDSAHS
                     QASKMIESVKFLATQARIYEGHEPLLFKAIFQSFMILKGGLSNGYKKYISDKGLPDDT
                     YKEDGIALFRVQGSGPENMQSIQVEPVASSLNSCYCYILHKDSLVFTWNGRQTTVDDQ
                     ELAERQLDLIKPDLQTRVHKEGAESDQFWEILGGKKEYSAQKIPTETESDPHLFSCTL
                     SKGDDMKVTEIYNFDQDDLLTEDVYILDCHTSIFLWVGQEFHLKTKTQVLPIGEKFIN
                     RDVLLEKLSLQTPIFILMEASEPPFFTRFFKWDSKKAAMHGNSFQRRLSLIKDGGLST
                     MNLKPKKRAPVSFGGRSASEKPQRSRSVSVSSDRPRARGRSPAFNALASKFDNPGGRN
                     LSTPPPQLNKLYAKSGGTTETGGGGGGGSFDTSRVLSKSRAIASLTASFDKPTREKLM
                     PRSVKVSSDSTAKSELNSKVNVASSRKEPLPEKEDVKKNEAEDEEGVTVYPYDRITTS
                     STNPAPDIDVTKREVYLSKAEFKEKFNMTKEAFNKMPKWRQNKMKISLNLF"
     misc_feature    34..366
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S1_like; cd11290"
                     /db_xref="CDD:200446"
     misc_feature    order(85..90,205..207,223..228,232..240,244..252,256..261,
                     292..294,298..300)
                     /gene="LOC139904085"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200446"
     misc_feature    391..621
                     /gene="LOC139904085"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; Region: ADF_gelsolin; cl15697"
                     /db_xref="CDD:472830"
     misc_feature    733..1002
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S3_like; cd11292"
                     /db_xref="CDD:200448"
     misc_feature    order(985..987,1000..1002)
                     /gene="LOC139904085"
                     /note="putative nucleotide binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:200448"
     misc_feature    1141..1443
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S4_like; cd11293"
                     /db_xref="CDD:200449"
     misc_feature    order(1189..1194,1306..1308,1324..1329,1333..1341,
                     1345..1353,1357..1362,1393..1395,1399..1401)
                     /gene="LOC139904085"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1414..1416
                     /gene="LOC139904085"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1534..1809
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S5_like; cd11288"
                     /db_xref="CDD:200444"
     misc_feature    1558..1560
                     /gene="LOC139904085"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200444"
     misc_feature    1846..2148
                     /gene="LOC139904085"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; Region: ADF_gelsolin; cl15697"
                     /db_xref="CDD:472830"
     misc_feature    2788..2895
                     /gene="LOC139904085"
                     /note="Villin headpiece domain; Region: VHP; pfam02209"
                     /db_xref="CDD:460493"
ORIGIN      
        1 atgtctgttt ctatgaaaga agttgatcca gcctttcaag gagctgggcg aaaaccagga
       61 attgaggtat ggcgtatcga gaattctaac ccggtagctg tcccagaggc ttcttatggt
      121 aaatttttta caggggaaac ctatatgata ttaaagacca gtccttcaaa aagtggcacc
      181 ttccgctatg acattcatta ctgggtaggt aaagatgcaa gtgagggtga agctggaatt
      241 gtagccataa aaacgcttga actagatgca gctgttggag gacgagctgt tcagtaccgt
      301 gaattacaag gtcatgaaag tgacagattt ctatcttgct ttaaaccatg tattatacct
      361 gaagaaactg aacctcaaga acacaaaaat cgcatgtttg tttgcaaagg aaagcacgtg
      421 gttcatgtac aagaggttcc tttggctcga tcttcactca accatgatgc catctgtata
      481 ttagacagta aaaataagat ttttcagttc aatgggtcaa atactttgat acaagaaagg
      541 gctaaagcat tagaagttgt gaaatatatt agagatactt accatcgttc gaaatgtgat
      601 atggctacaa ttgaggatgg gatgctgatg ggtgatgctg aagctggtga attttggggt
      661 ttctttggtg gatttgcacc tcttccaaag aaaaccgcaa ccaatgatgc tcaaagtacc
      721 gacacttttc ctaatcagct attttgtgtg aacaaaggga aggcagaacg tgttgcggct
      781 gattcgttga caaagaaact actagataca cacaaatgct attttctgga ctgcggatca
      841 gaaatttatg tgtgggtggg acgaagtact ccttttgatg aacggaaagc tgcaaatgga
      901 gctgcagaag aacatctacg tgaccaggaa aggccaaaat ctaagataat ccgcatgatt
      961 gagaattttg agacggtatc ttttcggtca aagttcaatt cgtggcctca acctggtgat
     1021 gtggtagcat ctgaggaggg tagaggcaag gtggctgcac tcttaaaacg ccaagggctc
     1081 gatgttaagg gtttggttaa aggtgctccc gaaaaggaag aacaacagga ggaccctgaa
     1141 ccgtatatag attgcagtgg aaccttgcag gtgtggtgtg tgaatggtca agagaagagt
     1201 ctcttgtcag aaacggatca gtcaaaactt tacaccggag attgctatat ctttcaatat
     1261 acgtactctg gagacgaaca agaagagtgc cttataggga cgtggtttgg aaagaaaagt
     1321 gtaacggaag ataaggattc agctcactca caggcaagca agatgattga gtcagtcaag
     1381 ttcttggcaa ctcaggcacg tatatatgaa ggacatgaac ctttactttt caaagcgata
     1441 tttcagagtt ttatgattct caagggtggt ctcagtaatg gatacaagaa gtacatatca
     1501 gataagggat taccagatga tacctataaa gaagatggaa tcgcactatt tcgagttcaa
     1561 ggttctggac cagaaaacat gcaatcaata caagttgaac ctgttgcttc gtccttgaac
     1621 tcctgctact gttacatatt acacaaggat tcactcgtct ttacatggaa cgggaggcaa
     1681 actaccgttg atgaccaaga acttgctgag agacaactgg atctcataaa gcccgatttg
     1741 caaaccagag ttcataagga gggtgcagag tctgatcagt tttgggaaat tttgggtggg
     1801 aaaaaagaat attctgctca aaagattcca acggagactg aaagtgatcc tcatttgttc
     1861 tcatgcacat tgtccaaagg agatgatatg aaggtgactg agatatacaa ctttgatcag
     1921 gatgatttgt tgacagaaga tgtatatatc cttgactgtc acacaagcat ctttctttgg
     1981 gtagggcaag agtttcattt aaagaccaaa acacaagtat tacctatcgg cgagaaattt
     2041 atcaatcgtg atgttcttct tgagaaatta tctcttcaaa ctcctatatt tatcttaatg
     2101 gaagcaagtg agccgccatt cttcacacgt ttcttcaaat gggattcaaa aaaggctgca
     2161 atgcatggaa actcattcca aaggcgactc tctcttataa aagacggagg gctgtcaact
     2221 atgaatctta aaccgaaaaa gagagcaccg gtatcatttg gaggacggtc agcgtctgaa
     2281 aaaccacaac ggtcaaggag tgtgtcagtc agctctgacc gaccacgtgc ccggggcaga
     2341 tctccagcct tcaatgccct tgcttccaag tttgataatc caggtggacg gaatctttcg
     2401 actcctccac cacagctaaa caagctttat gccaaatctg gaggcactac tgaaactggt
     2461 ggtggtggtg gtggcggcag ttttgatacg tctagagttc tttccaagtc cagggctata
     2521 gcatcactaa ccgcctcttt tgacaaacca acacgagaaa aacttatgcc ccgttctgtt
     2581 aaagtgagtt ccgattcaac tgcaaaatct gagctgaact ccaaggttaa cgtagcgagc
     2641 agtagaaagg agccattacc agagaaggaa gatgtaaaaa agaatgaggc tgaagatgag
     2701 gaaggtgtca cagtgtaccc atatgatcgt ataacaacat catcaactaa ccctgctcca
     2761 gatattgatg taaccaaacg agaggtgtat ctgtcgaagg ctgagtttaa ggagaagttt
     2821 aatatgacga aagaggcttt caacaagatg ccaaaatgga gacaaaataa gatgaaaatt
     2881 tcacttaatc ttttctgagt catctgcact tcgtttcagt gacatatgaa ggaaagcact
     2941 taatctaaca tccttttgat caactgatta gcagctcttc atctgaaacc cataaattac
     3001 tcttaacgta tgcagttttt ttaatatgtt gcagctgatc cattttttat tcttccacta
     3061 gtctgatatg atataggggt ccgcattatt ctaggactag ttaccac
//
LOCUS       XM_071886020            3104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides villin-5-like
            (LOC139904085), transcript variant X3, mRNA.
ACCESSION   XM_071886020
VERSION     XM_071886020.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3104
                     /gene="LOC139904085"
                     /note="villin-5-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139904085"
     CDS             1..2895
                     /gene="LOC139904085"
                     /codon_start=1
                     /product="villin-5-like isoform X3"
                     /protein_id="XP_071742121.1"
                     /db_xref="GeneID:139904085"
                     /translation="MSVSMKEVDPAFQGAGRKPGIEVWRIENSNPVAVPEASYGKFFT
                     GETYMILKTSPSKSGTFRYDIHYWVGKDASEGEAGIVAIKTLELDAAVGGRAVQYREL
                     QGHESDRFLSCFKPCIIPEETEPQEHKNRMFVCKGKHVVHVQEVPLARSSLNHDAICI
                     LDSKNKIFQFNGSNTLIQERAKALEVVKYIRDTYHRSKCDMATIEDGMLMGDAEAGEF
                     WGFFGGFAPLPKKTATNDAQSTDTFPNQLFCVNKGKAERVAADSLTKKLLDTHKCYFL
                     DCGSEIYVWVGRSTPFDERKAANGAAEEHLRDQERPKSKIIRMIENFETVSFRSKFNS
                     WPQPGDVVASEEGRGKVAALLKRQGLDVKGLVKGAPEKEEQQEDPEPYIDCSGTLQVW
                     CVNGQEKSLLSETDQSKLYTGDCYIFQYTYSGDEQEECLIGTWFGKKSVTEDKDSAHS
                     QASKMIESVKFLATQARIYEGHEPLLFKAIFQSFMILKGGLSNGYKKYISDKGLPDDT
                     YKEDGIALFRVQGSGPENMQSIQVEPVASSLNSCYCYILHKDSLVFTWNGRQTTVDDQ
                     ELAERQLDLIKPDLQTRVHKEGAESDQFWEILGGKKEYSAQKIPTETESDPHLFSCTL
                     SKDDMKVTEIYNFDQDDLLTEDVYILDCHTSIFLWVGQEFHLKTKTQVLPIGEKFINR
                     DVLLEKLSLQTPIFILMEASEPPFFTRFFKWDSKKAAMHGNSFQRRLSLIKDGGLSTM
                     NLKPKKRAPVSFGGRSASEKPQRSRSVSVSSDRPRARGRSPAFNALASKFDNPGGRNL
                     STPPPQLNKLYAKSGGTTETGGGGGGGSFDTSRVLSKSRAIASLTASFDKPTREKLMP
                     RSVKVSSDSTAKSELNSKVNVASSRKEPLPEKEDVKKNEAEDEEGVTVYPYDRITTSS
                     TNPAPDIDVTKREVYLSKAEFKEKFNMTKEAFNKMPKWRQNKMKISLNLF"
     misc_feature    34..366
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S1_like; cd11290"
                     /db_xref="CDD:200446"
     misc_feature    order(85..90,205..207,223..228,232..240,244..252,256..261,
                     292..294,298..300)
                     /gene="LOC139904085"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200446"
     misc_feature    391..621
                     /gene="LOC139904085"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; Region: ADF_gelsolin; cl15697"
                     /db_xref="CDD:472830"
     misc_feature    733..1002
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S3_like; cd11292"
                     /db_xref="CDD:200448"
     misc_feature    order(985..987,1000..1002)
                     /gene="LOC139904085"
                     /note="putative nucleotide binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:200448"
     misc_feature    1141..1443
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S4_like; cd11293"
                     /db_xref="CDD:200449"
     misc_feature    order(1189..1194,1306..1308,1324..1329,1333..1341,
                     1345..1353,1357..1362,1393..1395,1399..1401)
                     /gene="LOC139904085"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1414..1416
                     /gene="LOC139904085"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1534..1809
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S5_like; cd11288"
                     /db_xref="CDD:200444"
     misc_feature    1558..1560
                     /gene="LOC139904085"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200444"
     misc_feature    1846..2145
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 6-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S6_like; cd11291"
                     /db_xref="CDD:200447"
     misc_feature    2785..2892
                     /gene="LOC139904085"
                     /note="Villin headpiece domain; Region: VHP; pfam02209"
                     /db_xref="CDD:460493"
ORIGIN      
        1 atgtctgttt ctatgaaaga agttgatcca gcctttcaag gagctgggcg aaaaccagga
       61 attgaggtat ggcgtatcga gaattctaac ccggtagctg tcccagaggc ttcttatggt
      121 aaatttttta caggggaaac ctatatgata ttaaagacca gtccttcaaa aagtggcacc
      181 ttccgctatg acattcatta ctgggtaggt aaagatgcaa gtgagggtga agctggaatt
      241 gtagccataa aaacgcttga actagatgca gctgttggag gacgagctgt tcagtaccgt
      301 gaattacaag gtcatgaaag tgacagattt ctatcttgct ttaaaccatg tattatacct
      361 gaagaaactg aacctcaaga acacaaaaat cgcatgtttg tttgcaaagg aaagcacgtg
      421 gttcatgtac aagaggttcc tttggctcga tcttcactca accatgatgc catctgtata
      481 ttagacagta aaaataagat ttttcagttc aatgggtcaa atactttgat acaagaaagg
      541 gctaaagcat tagaagttgt gaaatatatt agagatactt accatcgttc gaaatgtgat
      601 atggctacaa ttgaggatgg gatgctgatg ggtgatgctg aagctggtga attttggggt
      661 ttctttggtg gatttgcacc tcttccaaag aaaaccgcaa ccaatgatgc tcaaagtacc
      721 gacacttttc ctaatcagct attttgtgtg aacaaaggga aggcagaacg tgttgcggct
      781 gattcgttga caaagaaact actagataca cacaaatgct attttctgga ctgcggatca
      841 gaaatttatg tgtgggtggg acgaagtact ccttttgatg aacggaaagc tgcaaatgga
      901 gctgcagaag aacatctacg tgaccaggaa aggccaaaat ctaagataat ccgcatgatt
      961 gagaattttg agacggtatc ttttcggtca aagttcaatt cgtggcctca acctggtgat
     1021 gtggtagcat ctgaggaggg tagaggcaag gtggctgcac tcttaaaacg ccaagggctc
     1081 gatgttaagg gtttggttaa aggtgctccc gaaaaggaag aacaacagga ggaccctgaa
     1141 ccgtatatag attgcagtgg aaccttgcag gtgtggtgtg tgaatggtca agagaagagt
     1201 ctcttgtcag aaacggatca gtcaaaactt tacaccggag attgctatat ctttcaatat
     1261 acgtactctg gagacgaaca agaagagtgc cttataggga cgtggtttgg aaagaaaagt
     1321 gtaacggaag ataaggattc agctcactca caggcaagca agatgattga gtcagtcaag
     1381 ttcttggcaa ctcaggcacg tatatatgaa ggacatgaac ctttactttt caaagcgata
     1441 tttcagagtt ttatgattct caagggtggt ctcagtaatg gatacaagaa gtacatatca
     1501 gataagggat taccagatga tacctataaa gaagatggaa tcgcactatt tcgagttcaa
     1561 ggttctggac cagaaaacat gcaatcaata caagttgaac ctgttgcttc gtccttgaac
     1621 tcctgctact gttacatatt acacaaggat tcactcgtct ttacatggaa cgggaggcaa
     1681 actaccgttg atgaccaaga acttgctgag agacaactgg atctcataaa gcccgatttg
     1741 caaaccagag ttcataagga gggtgcagag tctgatcagt tttgggaaat tttgggtggg
     1801 aaaaaagaat attctgctca aaagattcca acggagactg aaagtgatcc tcatttgttc
     1861 tcatgcacat tgtccaaaga tgatatgaag gtgactgaga tatacaactt tgatcaggat
     1921 gatttgttga cagaagatgt atatatcctt gactgtcaca caagcatctt tctttgggta
     1981 gggcaagagt ttcatttaaa gaccaaaaca caagtattac ctatcggcga gaaatttatc
     2041 aatcgtgatg ttcttcttga gaaattatct cttcaaactc ctatatttat cttaatggaa
     2101 gcaagtgagc cgccattctt cacacgtttc ttcaaatggg attcaaaaaa ggctgcaatg
     2161 catggaaact cattccaaag gcgactctct cttataaaag acggagggct gtcaactatg
     2221 aatcttaaac cgaaaaagag agcaccggta tcatttggag gacggtcagc gtctgaaaaa
     2281 ccacaacggt caaggagtgt gtcagtcagc tctgaccgac cacgtgcccg gggcagatct
     2341 ccagccttca atgcccttgc ttccaagttt gataatccag gtggacggaa tctttcgact
     2401 cctccaccac agctaaacaa gctttatgcc aaatctggag gcactactga aactggtggt
     2461 ggtggtggtg gcggcagttt tgatacgtct agagttcttt ccaagtccag ggctatagca
     2521 tcactaaccg cctcttttga caaaccaaca cgagaaaaac ttatgccccg ttctgttaaa
     2581 gtgagttccg attcaactgc aaaatctgag ctgaactcca aggttaacgt agcgagcagt
     2641 agaaaggagc cattaccaga gaaggaagat gtaaaaaaga atgaggctga agatgaggaa
     2701 ggtgtcacag tgtacccata tgatcgtata acaacatcat caactaaccc tgctccagat
     2761 attgatgtaa ccaaacgaga ggtgtatctg tcgaaggctg agtttaagga gaagtttaat
     2821 atgacgaaag aggctttcaa caagatgcca aaatggagac aaaataagat gaaaatttca
     2881 cttaatcttt tctgagtcat ctgcacttcg tttcagtgac atatgaagga aagcacttaa
     2941 tctaacatcc ttttgatcaa ctgattagca gctcttcatc tgaaacccat aaattactct
     3001 taacgtatgc agttttttta atatgttgca gctgatccat tttttattct tccactagtc
     3061 tgatatgata taggggtccg cattattcta ggactagtta ccac
//
LOCUS       XM_071886021            3053 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides villin-5-like
            (LOC139904085), transcript variant X4, mRNA.
ACCESSION   XM_071886021
VERSION     XM_071886021.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3053
                     /gene="LOC139904085"
                     /note="villin-5-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139904085"
     CDS             1..2844
                     /gene="LOC139904085"
                     /codon_start=1
                     /product="villin-4-like isoform X4"
                     /protein_id="XP_071742122.1"
                     /db_xref="GeneID:139904085"
                     /translation="MSVSMKEVDPAFQGAGRKPGIEVWRIENSNPVAVPEASYGKFFT
                     GETYMILKTSPSKSGTFRYDIHYWVGKDASEGEAGIVAIKTLELDAAVGGRAVQYREL
                     QGHESDRFLSCFKPCIIPEETEPQEHKNRMFVCKGKHVVHVQEVPLARSSLNHDAICI
                     LDSKNKIFQFNGSNTLIQERAKALEVVKYIRDTYHRSKCDMATIEDGMLMGDAEAGEF
                     WGFFGGFAPLPKKTATNDAQSTDTFPNQLFCVNKGKAERVAADSLTKKLLDTHKCYFL
                     DCGSEIYVWVGRSTPFDERKAANGAAEEHLRDQERPKSKIIRMIENFETVSFRSKFNS
                     WPQPGDVVASEEGRGKVAALLKRQGLDVKGLVKGAPEKEEQQEDPEPYIDCSGTLQVW
                     CVNGQEKSLLSETDQSKLYTGDCYIFQYTYSGDEQEECLIGTWFGKKSVTEDKDSAHS
                     QASKMIESVKFLATQARIYEGHEPLLFKAIFQSFMILKGGLSNGYKKYISDKGLPDDT
                     YKEDGIALFRVQGSGPENMQSIQVEPVASSLNSCYCYILHKDSLVFTWNGRQTTVDDQ
                     ELAERQLDLIKPDLQTRVHKEGAESDQFWEILGGKKEYSAQKIPTETESDPHLFSCTL
                     SKVMQVTEIYNFDQDDLLTEDVYILDCHTSIFLWVGQEFHLKTKTQVLPIGEKFINRD
                     VLLEKLSLQTPIFILMEASEPPFFTRFFKWDSKKAAMHGNSFQRRLSLIKDGGLSTMN
                     LKPKKRAPVSFGGRSASEKPQRSRSVSVSSDRPRARGRSPAFNALASKFDNPGGRNLS
                     TPPPQLNKLYAKSGGTTETGGGGGGGSFDTSRVLSKSRAIASLTASFDKPTREKLMPR
                     SVNVASSRKEPLPEKEDVKKNEAEDEEGVTVYPYDRITTSSTNPAPDIDVTKREVYLS
                     KAEFKEKFNMTKEAFNKMPKWRQNKMKISLNLF"
     misc_feature    34..366
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S1_like; cd11290"
                     /db_xref="CDD:200446"
     misc_feature    order(85..90,205..207,223..228,232..240,244..252,256..261,
                     292..294,298..300)
                     /gene="LOC139904085"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200446"
     misc_feature    391..621
                     /gene="LOC139904085"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; Region: ADF_gelsolin; cl15697"
                     /db_xref="CDD:472830"
     misc_feature    733..1002
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S3_like; cd11292"
                     /db_xref="CDD:200448"
     misc_feature    order(985..987,1000..1002)
                     /gene="LOC139904085"
                     /note="putative nucleotide binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:200448"
     misc_feature    1141..1443
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S4_like; cd11293"
                     /db_xref="CDD:200449"
     misc_feature    order(1189..1194,1306..1308,1324..1329,1333..1341,
                     1345..1353,1357..1362,1393..1395,1399..1401)
                     /gene="LOC139904085"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1414..1416
                     /gene="LOC139904085"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1534..1809
                     /gene="LOC139904085"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S5_like; cd11288"
                     /db_xref="CDD:200444"
     misc_feature    1558..1560
                     /gene="LOC139904085"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200444"
     misc_feature    1846..2142
                     /gene="LOC139904085"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; Region: ADF_gelsolin; cl15697"
                     /db_xref="CDD:472830"
     misc_feature    2734..2841
                     /gene="LOC139904085"
                     /note="Villin headpiece domain; Region: VHP; pfam02209"
                     /db_xref="CDD:460493"
ORIGIN      
        1 atgtctgttt ctatgaaaga agttgatcca gcctttcaag gagctgggcg aaaaccagga
       61 attgaggtat ggcgtatcga gaattctaac ccggtagctg tcccagaggc ttcttatggt
      121 aaatttttta caggggaaac ctatatgata ttaaagacca gtccttcaaa aagtggcacc
      181 ttccgctatg acattcatta ctgggtaggt aaagatgcaa gtgagggtga agctggaatt
      241 gtagccataa aaacgcttga actagatgca gctgttggag gacgagctgt tcagtaccgt
      301 gaattacaag gtcatgaaag tgacagattt ctatcttgct ttaaaccatg tattatacct
      361 gaagaaactg aacctcaaga acacaaaaat cgcatgtttg tttgcaaagg aaagcacgtg
      421 gttcatgtac aagaggttcc tttggctcga tcttcactca accatgatgc catctgtata
      481 ttagacagta aaaataagat ttttcagttc aatgggtcaa atactttgat acaagaaagg
      541 gctaaagcat tagaagttgt gaaatatatt agagatactt accatcgttc gaaatgtgat
      601 atggctacaa ttgaggatgg gatgctgatg ggtgatgctg aagctggtga attttggggt
      661 ttctttggtg gatttgcacc tcttccaaag aaaaccgcaa ccaatgatgc tcaaagtacc
      721 gacacttttc ctaatcagct attttgtgtg aacaaaggga aggcagaacg tgttgcggct
      781 gattcgttga caaagaaact actagataca cacaaatgct attttctgga ctgcggatca
      841 gaaatttatg tgtgggtggg acgaagtact ccttttgatg aacggaaagc tgcaaatgga
      901 gctgcagaag aacatctacg tgaccaggaa aggccaaaat ctaagataat ccgcatgatt
      961 gagaattttg agacggtatc ttttcggtca aagttcaatt cgtggcctca acctggtgat
     1021 gtggtagcat ctgaggaggg tagaggcaag gtggctgcac tcttaaaacg ccaagggctc
     1081 gatgttaagg gtttggttaa aggtgctccc gaaaaggaag aacaacagga ggaccctgaa
     1141 ccgtatatag attgcagtgg aaccttgcag gtgtggtgtg tgaatggtca agagaagagt
     1201 ctcttgtcag aaacggatca gtcaaaactt tacaccggag attgctatat ctttcaatat
     1261 acgtactctg gagacgaaca agaagagtgc cttataggga cgtggtttgg aaagaaaagt
     1321 gtaacggaag ataaggattc agctcactca caggcaagca agatgattga gtcagtcaag
     1381 ttcttggcaa ctcaggcacg tatatatgaa ggacatgaac ctttactttt caaagcgata
     1441 tttcagagtt ttatgattct caagggtggt ctcagtaatg gatacaagaa gtacatatca
     1501 gataagggat taccagatga tacctataaa gaagatggaa tcgcactatt tcgagttcaa
     1561 ggttctggac cagaaaacat gcaatcaata caagttgaac ctgttgcttc gtccttgaac
     1621 tcctgctact gttacatatt acacaaggat tcactcgtct ttacatggaa cgggaggcaa
     1681 actaccgttg atgaccaaga acttgctgag agacaactgg atctcataaa gcccgatttg
     1741 caaaccagag ttcataagga gggtgcagag tctgatcagt tttgggaaat tttgggtggg
     1801 aaaaaagaat attctgctca aaagattcca acggagactg aaagtgatcc tcatttgttc
     1861 tcatgcacat tgtccaaagt gatgcaggtg actgagatat acaactttga tcaggatgat
     1921 ttgttgacag aagatgtata tatccttgac tgtcacacaa gcatctttct ttgggtaggg
     1981 caagagtttc atttaaagac caaaacacaa gtattaccta tcggcgagaa atttatcaat
     2041 cgtgatgttc ttcttgagaa attatctctt caaactccta tatttatctt aatggaagca
     2101 agtgagccgc cattcttcac acgtttcttc aaatgggatt caaaaaaggc tgcaatgcat
     2161 ggaaactcat tccaaaggcg actctctctt ataaaagacg gagggctgtc aactatgaat
     2221 cttaaaccga aaaagagagc accggtatca tttggaggac ggtcagcgtc tgaaaaacca
     2281 caacggtcaa ggagtgtgtc agtcagctct gaccgaccac gtgcccgggg cagatctcca
     2341 gccttcaatg cccttgcttc caagtttgat aatccaggtg gacggaatct ttcgactcct
     2401 ccaccacagc taaacaagct ttatgccaaa tctggaggca ctactgaaac tggtggtggt
     2461 ggtggtggcg gcagttttga tacgtctaga gttctttcca agtccagggc tatagcatca
     2521 ctaaccgcct cttttgacaa accaacacga gaaaaactta tgccccgttc tgttaacgta
     2581 gcgagcagta gaaaggagcc attaccagag aaggaagatg taaaaaagaa tgaggctgaa
     2641 gatgaggaag gtgtcacagt gtacccatat gatcgtataa caacatcatc aactaaccct
     2701 gctccagata ttgatgtaac caaacgagag gtgtatctgt cgaaggctga gtttaaggag
     2761 aagtttaata tgacgaaaga ggctttcaac aagatgccaa aatggagaca aaataagatg
     2821 aaaatttcac ttaatctttt ctgagtcatc tgcacttcgt ttcagtgaca tatgaaggaa
     2881 agcacttaat ctaacatcct tttgatcaac tgattagcag ctcttcatct gaaacccata
     2941 aattactctt aacgtatgca gtttttttaa tatgttgcag ctgatccatt ttttattctt
     3001 ccactagtct gatatgatat aggggtccgc attattctag gactagttac cac
//
LOCUS       XM_071886022            1041 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxidase 16-like
            (LOC139904086), mRNA.
ACCESSION   XM_071886022
VERSION     XM_071886022.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1041
                     /gene="LOC139904086"
                     /note="peroxidase 16-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 65
                     Proteins"
                     /db_xref="GeneID:139904086"
     CDS             1..957
                     /gene="LOC139904086"
                     /codon_start=1
                     /product="peroxidase 16-like"
                     /protein_id="XP_071742123.1"
                     /db_xref="GeneID:139904086"
                     /translation="MKKILCLLFLCFFVVSSYAQLRQNFYQSTCPNVESIVKVAVTKK
                     FQQTFVTIPGTLRLFFHDCFVRGCDASIFLSNGNNAEKDHHDDQSLAGDGFDTVIQAK
                     AALDSNPICRNKVSCADILALATRDVVALAGGPSYKVELGRRDGRISTKASVQHRLPH
                     ADFNLNQLNTMFAAHGLSQTDMIALSGAHTLGFSHCGQFSKRIYSKAGIDPTLNRQYA
                     LELRQMCPVNVDPRIAINMDPTTPRTFDNAYYKNLQQGKGLFTSDQVLFTDTRSRPTV
                     NLFASDNNAFNQAFVNAITKLGRVGVLTGNQGEIRRDCNRVN"
     misc_feature    58..951
                     /gene="LOC139904086"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; Region: secretory_peroxidase; cd00693"
                     /db_xref="CDD:173827"
     misc_feature    order(148..150,157..162,166..171,178..183,265..267,
                     277..279,475..486,502..504,514..516,544..546,553..558,
                     562..567,571..585,589..594,709..711,778..780,784..786,
                     880..882)
                     /gene="LOC139904086"
                     /note="active site"
                     /db_xref="CDD:173827"
     misc_feature    order(148..150,157..162,166..171,178..180,259..261,
                     265..267,277..279,475..483,502..504,514..516,544..546,
                     553..558,562..567,571..585,592..594,709..711,778..780,
                     784..786,880..882)
                     /gene="LOC139904086"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:173827"
     misc_feature    order(169..171,253..258,475..486,583..585,589..594)
                     /gene="LOC139904086"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173827"
     misc_feature    order(184..186,193..195,205..207,211..213,568..570,
                     712..714,721..723,730..732,736..738)
                     /gene="LOC139904086"
                     /note="calcium binding sites [ion binding]; other site"
                     /db_xref="CDD:173827"
ORIGIN      
        1 atgaagaaaa tactctgttt gctattcctc tgtttctttg tagtttcatc ttatgctcaa
       61 cttagacaaa acttctatca atctacttgc ccaaatgttg aatcgatcgt aaaagtagcc
      121 gtcaccaaga aattccagca aacattcgtc actattccgg gcactcttcg cctcttcttt
      181 cacgactgtt ttgttcgggg atgtgatgct tcgatttttc tgtccaatgg aaacaacgcc
      241 gaaaaggacc accatgatga tcagtcgctc gctggtgatg gatttgatac tgtcatccaa
      301 gcgaaggccg cccttgacag caatcctatt tgtcggaata aagtttcttg tgcggatata
      361 ttagctcttg ccactagaga tgttgttgcg ttggcaggtg ggccatccta caaggtggaa
      421 ttaggaagaa gagatgggag aatatctaca aaagcaagtg tacaacacag acttccacat
      481 gcagacttta acttgaacca acttaacacc atgtttgctg ctcatggtct atctcaaacc
      541 gatatgattg cactttcagg tgcacataca cttggattct cacattgtgg tcaattctcg
      601 aaacgtatat attcaaaggc tgggattgac ccaaccctta atcgacaata cgctcttgag
      661 ctaagacaga tgtgtccagt caatgtggac ccacggatcg cgattaacat ggaccccacc
      721 accccacgca cttttgacaa tgcgtattat aagaatctac agcaggggaa gggcctattt
      781 acttctgacc aagttttgtt tactgatact cgatcaaggc caacggttaa cctatttgcg
      841 tctgacaaca atgcctttaa tcaggctttc gtgaacgcta ttaccaagct cggtcgtgtt
      901 ggggttttga ctggtaacca aggtgaaatt agacgcgatt gtaacagagt gaattaagta
      961 actagagaat tatggtatct tatgtttatt aatttaatta ttgatttaac tatgtaataa
     1021 tgtatatttt cttcttgaat a
//
LOCUS       XM_071886023             957 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxidase 16-like
            (LOC139904087), mRNA.
ACCESSION   XM_071886023
VERSION     XM_071886023.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..957
                     /gene="LOC139904087"
                     /note="peroxidase 16-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 65
                     Proteins"
                     /db_xref="GeneID:139904087"
     CDS             1..957
                     /gene="LOC139904087"
                     /codon_start=1
                     /product="peroxidase 16-like"
                     /protein_id="XP_071742124.1"
                     /db_xref="GeneID:139904087"
                     /translation="MKKQMLCLLFLCFFVVKSYGQLRQNFYQSTCPNVESIVKAAVTK
                     KFQQTFVTIPGTLRLFFHDCFVRGCDASVILANANAEKDHPDDLSLAGDGFDTVIKAK
                     AALDSNPSCQNKVSCADILALATRDVIGLAGGPSYSVELGRRDGRISTKASVQHSLPQ
                     PTFNLNQLNTMFAKFNLTQTDMIALSGAHTLGFSHCSRFAPRLYGKNGIDPTLNKQYA
                     QQLKQMCPQNVDPQIAINMDPTTPQTFDNAYYQNLQQGKGLFSSDQVLFTDSRSKATV
                     NLFATSQTAFNQAFVTAITKLGRVGVLTGNKGEIRRDCTRTN"
     misc_feature    61..951
                     /gene="LOC139904087"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; Region: secretory_peroxidase; cd00693"
                     /db_xref="CDD:173827"
     misc_feature    order(151..153,160..165,169..174,181..186,265..267,
                     277..279,475..486,502..504,514..516,544..546,553..558,
                     562..567,571..585,589..594,709..711,778..780,784..786,
                     880..882)
                     /gene="LOC139904087"
                     /note="active site"
                     /db_xref="CDD:173827"
     misc_feature    order(151..153,160..165,169..174,181..183,259..261,
                     265..267,277..279,475..483,502..504,514..516,544..546,
                     553..558,562..567,571..585,592..594,709..711,778..780,
                     784..786,880..882)
                     /gene="LOC139904087"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:173827"
     misc_feature    order(172..174,253..258,475..486,583..585,589..594)
                     /gene="LOC139904087"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173827"
     misc_feature    order(187..189,196..198,208..210,214..216,568..570,
                     712..714,721..723,730..732,736..738)
                     /gene="LOC139904087"
                     /note="calcium binding sites [ion binding]; other site"
                     /db_xref="CDD:173827"
ORIGIN      
        1 atgaagaagc aaatgctatg tttgttgttc ctttgtttct ttgttgttaa atcatatggt
       61 caacttagac aaaatttcta ccaatctact tgcccaaatg tcgaatcaat cgtaaaagca
      121 gccgtcacca agaaattcca gcaaacattc gtcactattc caggcactct tcgcctcttc
      181 tttcacgact gttttgttcg gggttgtgat gcttcagtta tcctagcaaa tgcaaacgcc
      241 gaaaaagacc atcctgatga cctgtccctt gctggagacg ggttcgatac agtgatcaaa
      301 gcaaaggctg cacttgactc caatcctagt tgccagaaca aagtttcttg tgctgatatt
      361 ttggctcttg ccactagaga cgtcattggc ttggcaggtg gaccatcgta cagcgtcgaa
      421 ttgggaagac gagatggaag aatttcgaca aaagctagtg ttcaacatag tcttccacaa
      481 ccgactttta acttgaacca acttaatacc atgtttgcta agtttaatct aactcaaact
      541 gatatgatcg cactttctgg tgcacataca cttggattct ctcattgtag cagattcgca
      601 ccgcgtctct atgggaagaa cggaattgac ccaacactaa acaaacaata cgcgcaacaa
      661 ctgaagcaaa tgtgtcctca aaatgtggac ccccaaattg cgatcaacat ggaccctaca
      721 accccacaaa cgttcgacaa tgcgtattac caaaacctcc aacaagggaa gggtttgttt
      781 agctctgacc aagtcttatt tacagatagt cgttcaaagg cgacagttaa cctatttgcg
      841 actagccaaa ccgcattcaa ccaagctttt gtgaccgcta ttactaagct tggccgagtt
      901 ggggttttga cagggaacaa gggggagatc agacgcgatt gcacaaggac taattaa
//
LOCUS       XR_011778652            1254 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904088), ncRNA.
ACCESSION   XR_011778652
VERSION     XR_011778652.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1254
                     /gene="LOC139904088"
                     /note="uncharacterized LOC139904088; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904088"
     ncRNA           1..1254
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904088"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904088"
ORIGIN      
        1 aactttttta attaacctta atcgggttat gtaaaccgat gatatatttg tgttaaactg
       61 gatgtgttta agtgttgacg tatgatgatt agtttactgt gtatgatagt ttagaaggtt
      121 taactatact tgaattaatt ggcctaagtc attagtccat tatggatgtt ttagattaga
      181 ttatgatgcc atgatttgct tagcaaacct tttcattagg gttcaatttt gatttttcaa
      241 aattatgatt cgcttatgtc catgatgtat gctactttaa agatagggga attacctgat
      301 aatgtaacga gtgctatgcc tcaccaacgt ttttgaaaaa agtgtggcat aattaagtca
      361 ccattaacaa cacatattgt acaattggtt acttcccgat tcgctcttaa tttaatcgat
      421 aatcattggg tattcacaag gtgacctagc ggggtggttc gggtagtggc tcaaaacaag
      481 ttatccttaa gcaagggtca agttgggttt ggttgaccta ctaacacttg aattgccgaa
      541 aattttgaat tttgcgtacg tattgattat tacaattaaa gctaagctta aaataatatg
      601 agtactatgt aggaggttcg tcacttcttt gcatcaaagt ggacgttgca tgatcttcat
      661 ttggttagac ccatttgagt ttttaatgca tcttattaca aaagttagca tcagccttgt
      721 cccatgtttc tatttttaag cctcacatgt cattcttatc ttatgcaaga catgaaacat
      781 gctttgcatc tgttcgccat acatgattta aagtgtaaaa tatatgtgaa ttattatcct
      841 atgttttact gaaattataa tttcaatgaa tgaagtgatt tagcggaagt ttctttgttt
      901 tactgatcgt tgtatattgg acaactacac tgttttagga acagggaccg ttgttgatca
      961 tttagcgttc agcagctgga gggactgttg tcttatgcac atattccgtt gatttggctc
     1021 gcacaaaact tgccatttca atgactggac aagagtttag gataggagga ttggaggaag
     1081 gcttgatcat catagcctta aagttgaaag tattaatatt acactttgcg ttaaatcact
     1141 ctataatttt aacttgactt gataaatcct gcagtttaac ttttgtatgt atgtatatgt
     1201 tatgtcaata aattataaat attggatatt ttcattttaa cctactgttt ttca
//
LOCUS       XR_011778653             273 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904089), ncRNA.
ACCESSION   XR_011778653
VERSION     XR_011778653.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..273
                     /gene="LOC139904089"
                     /note="uncharacterized LOC139904089; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904089"
     ncRNA           1..273
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904089"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904089"
ORIGIN      
        1 ctacaaactc ttaattaggg ttcttcaaat ctcacctgtg ctttttctaa aacagggttc
       61 atctatgaag atgtaatata cgaagatgta atatacgttc tatgaagatg tgtaatcgat
      121 actcagaagt caaagagatg caatccaatc cttccgatga tttcatgagc cttcctcttg
      181 agatatgtga tatggttgca attgcaagat atttaaatgt tacacttata gttcctgagc
      241 tggataaaac ttcattctgg gctgatccca ggt
//
LOCUS       XM_071886024             910 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phragmoplastin DRP1E-like
            (LOC139904090), mRNA.
ACCESSION   XM_071886024
VERSION     XM_071886024.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..910
                     /gene="LOC139904090"
                     /note="phragmoplastin DRP1E-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904090"
     CDS             542..901
                     /gene="LOC139904090"
                     /codon_start=1
                     /product="phragmoplastin DRP1E-like"
                     /protein_id="XP_071742125.1"
                     /db_xref="GeneID:139904090"
                     /translation="MDKGINGLDHLEPVIKEKVPDIGSLLNKNIYMMEAELDRIGRPV
                     AVDAGSQLYTILELCRAFNKIFNKNLNGGFHDPWHIFSRVLLSHIKTIIETEGRAKSS
                     GSEVSSPDGKNEYLWYD"
     misc_feature    <584..>862
                     /gene="LOC139904090"
                     /note="Dynamin central region; Region: Dynamin_M;
                     pfam01031"
                     /db_xref="CDD:460033"
ORIGIN      
        1 ttaacgtttg ttacagcatc tcttttgatc ggaggaaccg tacgaatcgg agaagtcaac
       61 ttctgagttc gtggggtttc tattcgtttc tgatttttgt gcatccgaag tcgtatacta
      121 aagatccttt ctcatatttt agggtttgta aattattttc tacggagtat ttacttacca
      181 tttaatttat taatcatcac ggcaactaag gacaatcgta tacaaagatt tcgtgatttt
      241 tctagtaatc tcttttttta tctcaacata tttttttttt tggtaagcga ggaaactcta
      301 ctaggaacca tagatcacat tggctcccgt agaaggtaaa aactcgggta atcaagcccc
      361 cgagcgcgag acttgatacc gggtgaattg cattatgcgc accctctagt caccgagagt
      421 ggccactcag acaagcctag tttgtttttt tgtttttgtt tttttttttt tttttttttt
      481 tttttatctc aacattcaac aacaacacta ggtgaacggg catttggggt tgtgacatcc
      541 gatggacaaa ggaattaatg gtttggatca tttggaacct gtaatcaaag aaaaagtacc
      601 ggatatcggt tctttgttaa acaaaaatat ttatatgatg gaagccgagt tggaccgtat
      661 tgggaggcca gttgcagttg atgctggatc tcagctgtat accatcttgg aactttgtcg
      721 tgctttcaac aaaatcttca acaagaattt aaatgggggg tttcacgatc catggcatat
      781 attctcaaga gtgttacttt cacatattaa aacgataata gaaactgaag gccgggcaaa
      841 atcaagtggt tcggaggtat cttcacctga tggcaaaaac gaatatcttt ggtatgacta
      901 atgatttatc
//
LOCUS       XM_071886025             463 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904091), mRNA.
ACCESSION   XM_071886025
VERSION     XM_071886025.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..463
                     /gene="LOC139904091"
                     /note="uncharacterized LOC139904091; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904091"
     CDS             33..356
                     /gene="LOC139904091"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742126.1"
                     /db_xref="GeneID:139904091"
                     /translation="MDPSHSTAAAGVPPPKQSLGFVANAIKRKHSFIQFFAMSGIFLL
                     SMRSVGQKYRIKDVEEDTAALQQEQNSLSDRIDFIKNSLLAEAAVDSTGTFANRLRVL
                     FGESN"
ORIGIN      
        1 cacacttcta aatccaaacc aaaaccactg ccatggatcc gtcgcactcc accgcagccg
       61 ccggcgtccc accgccaaaa caatcgctcg gtttcgtggc taacgcgatc aaaagaaaac
      121 acagtttcat tcaattcttc gcaatgtctg gtatatttct actaagcatg cgatcagtag
      181 gtcaaaaata tcgaatcaaa gatgttgaag aagatacagc tgctctacaa caagaacaaa
      241 attcactttc tgatcgtatt gattttatta aaaatagtct tcttgctgaa gctgcggttg
      301 attctaccgg tacttttgct aatcggcttc gtgtattgtt tggggaaagt aattgaacta
      361 tgagtgttat agattagggt tcatgttata tgatgataca tttttcaatt tatgaattct
      421 gtaaggatat gttatgttga ataagaacat ggtaaacctt aat
//
LOCUS       XM_071886026            1451 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides homogentisate
            phytyltransferase 1, chloroplastic-like (LOC139904092), mRNA.
ACCESSION   XM_071886026
VERSION     XM_071886026.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1451
                     /gene="LOC139904092"
                     /note="homogentisate phytyltransferase 1,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139904092"
     CDS             136..1323
                     /gene="LOC139904092"
                     /codon_start=1
                     /product="homogentisate phytyltransferase 1,
                     chloroplastic-like"
                     /protein_id="XP_071742127.1"
                     /db_xref="GeneID:139904092"
                     /translation="MKSLIIGSFSNKVSCYSSPLPDSSSSRIPTGCYHVSLRTSKSNR
                     VIQSQSSLVRRNIDRLDKTLLLYRKRSTKHVASAVSEQPTEPDASSPQNFLPNAIDAF
                     YRFSRPHTVIGTALSIVSVSLLAVQKLSDFSLLFFIGVLEAIVAAFFMNIYIVGLNQL
                     SDIEIDKVNKPYLPLASGEYSVQTGIIIVSSFAVLSFWLGWIVGSWPLFWALFISFLL
                     GTAYSINIPMLRWKRFALVAAMCIVAVRAIIVQVAFYLHIQTFVYGRLAVFPKPVIFA
                     TGFMSFFSVVIALFKDIPDIVGDKIFGIQSFTVRMGQKRVFWICILLLEIAYGVAILV
                     GASSHFLWSRYITILGHAILGLVLWGRAKSTDLENKSAITSFYMFIWQLFYAEYLLIP
                     LVR"
     misc_feature    481..1320
                     /gene="LOC139904092"
                     /note="homogentisate phytyltransferase; Region: PLN02878"
                     /db_xref="CDD:178466"
     misc_feature    order(619..621,631..633,1018..1020,1030..1032)
                     /gene="LOC139904092"
                     /note="putative active site [active]"
                     /db_xref="CDD:260123"
     polyA_site      1451
                     /gene="LOC139904092"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacacacaca cacacacact tgctaaatat ttgtatgata acaattactg tatattcaag
       61 agaaatcgag aataatcaat tgttctgttc atatgaagtg taatttgatt tgggtttaat
      121 ttgtgaaaac aaaagatgaa atctttaatt attgggtctt tttctaataa ggtttcttgc
      181 tattcttcac cattaccaga ttcatcgtct tcacgtatac caacaggttg ttatcatgta
      241 tcactaagaa catcaaagag taaccgagtc attcaatctc aatcaagtct tgtgagacgc
      301 aatattgaca gattggataa aaccttacta ctttatcgga aacgaagtac aaaacatgta
      361 gcaagtgcgg tttctgaaca acccactgaa cccgatgctt caagccctca aaactttttg
      421 ccaaatgcta ttgatgcctt ctacaggttt tcaagacctc atacagttat aggaactgca
      481 ttgagcatag tttcggtttc actccttgca gttcaaaagc tttctgattt ttctctacta
      541 ttctttattg gtgttttaga ggctattgtt gctgccttct ttatgaacat atatattgtt
      601 ggcttgaacc agctatctga tatagaaata gacaaggtta acaagccata tcttccattg
      661 gcatcagggg aatattcagt tcaaactggt attatcattg tatcatcgtt tgcagtcctg
      721 agtttctggc tcggatggat tgtgggttca tggcctttat tttgggcact tttcataagt
      781 ttcctactcg ggactgcata ttcaatcaat ataccgatgc tgcggtggaa gcgatttgct
      841 cttgtggcag caatgtgcat tgtagctgta agagctataa ttgttcaagt tgcattttac
      901 ttgcacattc agacttttgt gtatggacga ctcgctgtgt tcccaaaacc cgtaatattt
      961 gcaaccgggt ttatgagttt cttctctgtt gttatagcat tgttcaagga catacctgat
     1021 attgttggag acaagatttt tggcattcaa tcgtttacgg tccgtatggg tcaaaaacgg
     1081 gtgttctgga tttgtatctt attacttgaa atagcttatg gtgttgctat tctagttgga
     1141 gcatcgtctc acttcctttg gagccgatac ataacgatat tgggtcatgc aattcttggt
     1201 ctagttcttt ggggtcgtgc caagtcaact gatctggaga acaaatcggc aataacctca
     1261 ttttacatgt tcatatggca gttattctat gcggagtact tactcatacc gctcgtgaga
     1321 tgatatgaag caacattgaa atagggccca tcattttagt gcttatttgt tgttgtagtt
     1381 ttgccatcac tccagctcat actggatacc agttatagtt aactttcatt tatcttatgg
     1441 agatttactt t
//
LOCUS       XM_071886027             521 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904093), transcript variant X1, mRNA.
ACCESSION   XM_071886027
VERSION     XM_071886027.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..521
                     /gene="LOC139904093"
                     /note="uncharacterized LOC139904093; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904093"
     CDS             97..495
                     /gene="LOC139904093"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742128.1"
                     /db_xref="GeneID:139904093"
                     /translation="MPIINEPATPPPTIGKMGPYTVFITPTSDPSPTTVSDSPKKNNN
                     SPMPVKATLPVQPPPVQYHKPTSPKGGFFWDAVAKVQNAHSSLDVYVAHWFGLNQSKY
                     QWALDDYYESKGMDKVAAQVKDASTKAQSV"
     misc_feature    <304..435
                     /gene="LOC139904093"
                     /note="FAM177 family; Region: FAM177; pfam14774"
                     /db_xref="CDD:434199"
ORIGIN      
        1 tctttttatt tgctctctct taacaatcta gatctgctgc tacaaaaccc ttgtttatct
       61 atttcttttc aaacccctta acttaaaatt acgaatatgc ccatcattaa tgaaccggcg
      121 acaccgccgc cgactatcgg aaagatgggt ccatacactg tctttattac tcctacttcc
      181 gatccatctc cgaccactgt ttccgattct ccaaagaaaa ataacaattc tccgatgccg
      241 gtgaaagcta cacttccagt tcagccaccg ccggttcagt accataaacc cacctcacca
      301 aaaggtggat ttttctggga tgcagttgcc aaagttcaaa atgcacattc aagtttggat
      361 gtgtatgtag cacattggtt tggtttgaat caatcaaagt atcagtgggc tcttgatgat
      421 tactatgaaa gcaagggaat ggacaaggtt gccgcacaag tcaaagatgc atccactaaa
      481 gctcaaagcg tgtaacgttt gcttacaaca aaaggtaaga g
//
LOCUS       XM_071886028             530 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904093), transcript variant X2, mRNA.
ACCESSION   XM_071886028
VERSION     XM_071886028.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..530
                     /gene="LOC139904093"
                     /note="uncharacterized LOC139904093; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904093"
     CDS             97..453
                     /gene="LOC139904093"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742129.1"
                     /db_xref="GeneID:139904093"
                     /translation="MPIINEPATPPPTIGKMGPYTVFITPTSDPSPTTVSDSPKKNNN
                     SPMPVKATLPVQPPPVQYHKPTSPKGGFFWDAVAKVQNAHSSLDVYVAHWFGLNQSKY
                     QWALDDYYESKGMVLM"
     misc_feature    <304..435
                     /gene="LOC139904093"
                     /note="FAM177 family; Region: FAM177; pfam14774"
                     /db_xref="CDD:434199"
ORIGIN      
        1 tctttttatt tgctctctct taacaatcta gatctgctgc tacaaaaccc ttgtttatct
       61 atttcttttc aaacccctta acttaaaatt acgaatatgc ccatcattaa tgaaccggcg
      121 acaccgccgc cgactatcgg aaagatgggt ccatacactg tctttattac tcctacttcc
      181 gatccatctc cgaccactgt ttccgattct ccaaagaaaa ataacaattc tccgatgccg
      241 gtgaaagcta cacttccagt tcagccaccg ccggttcagt accataaacc cacctcacca
      301 aaaggtggat ttttctggga tgcagttgcc aaagttcaaa atgcacattc aagtttggat
      361 gtgtatgtag cacattggtt tggtttgaat caatcaaagt atcagtgggc tcttgatgat
      421 tactatgaaa gcaagggaat ggtattgatg taaagtcctt gtgaaacatt atgaactaca
      481 ggacaaggtt gccgcacaag tcaaagatgc atccactaaa gctcaaagcg
//
LOCUS       XM_071886029             521 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904094), transcript variant X1, mRNA.
ACCESSION   XM_071886029
VERSION     XM_071886029.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..521
                     /gene="LOC139904094"
                     /note="uncharacterized LOC139904094; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904094"
     CDS             97..495
                     /gene="LOC139904094"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742130.1"
                     /db_xref="GeneID:139904094"
                     /translation="MPIINEPATPPPTIGKMGPYTVFITPTSDPSPTTVSDSPKKNNN
                     SPMPVKATLPVQPPPVQYHKPTSPKGGFFWDAVAKVQNAHSSLDVYVAHWFGLNQSKY
                     QWALDDYYESKGMDKVAAQVKDASTKAQSV"
     misc_feature    <304..435
                     /gene="LOC139904094"
                     /note="FAM177 family; Region: FAM177; pfam14774"
                     /db_xref="CDD:434199"
ORIGIN      
        1 tctttttatt tgctctctct taacaatcta gatctgctgc tacaaaaccc ttgtttatct
       61 atttcttttc aaacccctta acttaaaatt acgaatatgc ccatcattaa tgaaccggcg
      121 acaccgccgc cgactatcgg aaagatgggt ccatacactg tctttattac tcctacttcc
      181 gatccatctc cgaccactgt ttccgattct ccaaagaaaa ataacaattc tccgatgccg
      241 gtgaaagcta cacttccagt tcagccaccg ccggttcagt accataaacc cacctcacca
      301 aaaggtggat ttttctggga tgcagttgcc aaagttcaaa atgcacattc aagtttggat
      361 gtgtatgtag cacattggtt tggtttgaat caatcaaagt atcagtgggc tcttgatgat
      421 tactatgaaa gcaagggaat ggacaaggtt gccgcacaag tcaaagatgc atccactaaa
      481 gctcaaagcg tgtaacgttt gcttacaaca aaaggtaaga g
//
LOCUS       XM_071886030             531 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904094), transcript variant X2, mRNA.
ACCESSION   XM_071886030
VERSION     XM_071886030.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..531
                     /gene="LOC139904094"
                     /note="uncharacterized LOC139904094; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904094"
     CDS             97..453
                     /gene="LOC139904094"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742131.1"
                     /db_xref="GeneID:139904094"
                     /translation="MPIINEPATPPPTIGKMGPYTVFITPTSDPSPTTVSDSPKKNNN
                     SPMPVKATLPVQPPPVQYHKPTSPKGGFFWDAVAKVQNAHSSLDVYVAHWFGLNQSKY
                     QWALDDYYESKGMVLM"
     misc_feature    <304..435
                     /gene="LOC139904094"
                     /note="FAM177 family; Region: FAM177; pfam14774"
                     /db_xref="CDD:434199"
ORIGIN      
        1 tctttttatt tgctctctct taacaatcta gatctgctgc tacaaaaccc ttgtttatct
       61 atttcttttc aaacccctta acttaaaatt acgaatatgc ccatcattaa tgaaccggcg
      121 acaccgccgc cgactatcgg aaagatgggt ccatacactg tctttattac tcctacttcc
      181 gatccatctc cgaccactgt ttccgattct ccaaagaaaa ataacaattc tccgatgccg
      241 gtgaaagcta cacttccagt tcagccaccg ccggttcagt accataaacc cacctcacca
      301 aaaggtggat ttttctggga tgcagttgcc aaagttcaaa atgcacattc aagtttggat
      361 gtgtatgtag cacattggtt tggtttgaat caatcaaagt atcagtgggc tcttgatgat
      421 tactatgaaa gcaagggaat ggtattgatg taaagtcctt gtgaaacatt atgaactaca
      481 ggacaaggtt gccgcacaag tcaaagatgc atccactaaa gctcaaagcg t
//
LOCUS       XM_071886031            1167 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-hydroxyisobutyryl-CoA
            hydrolase 1-like (LOC139904095), mRNA.
ACCESSION   XM_071886031
VERSION     XM_071886031.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1167
                     /gene="LOC139904095"
                     /note="3-hydroxyisobutyryl-CoA hydrolase 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904095"
     CDS             1..1167
                     /gene="LOC139904095"
                     /codon_start=1
                     /product="3-hydroxyisobutyryl-CoA hydrolase 1-like"
                     /protein_id="XP_071742132.1"
                     /db_xref="GeneID:139904095"
                     /translation="MALSIQTEAEPVIFEEISGVRKVILNRKKKLNSLNYDMLSKMHE
                     KLKLYENDPTVKLVILKANGKAFCAGGDLTSAIHFIALGHWSFITSFYRKQFCLDYVL
                     ATYKKPMVAILDGSVMGGGVGISIHSTFRIVTENTIFAMPEASIGLFPDVGASYFLSR
                     LPGFFGEYMGLTGARLNGAEMVALGLGTHFVPSKNLISMEKALENLVASSNAPSVAMM
                     SMIIDKFTEEINIKPDSAYARLPLINQCFSGGSCEEILSSLEHLATEVQEKWIQNATR
                     SMKSSTPIGLKIFLRTIRKGRSKNIKQCLENEYIAICNLTSKKISHDFYEGPRAMLIE
                     KDKKPQWVPSKLEDASDDMVAKFFSIAFSEDDDWIPLKLPSRSNEAAAAIASKL"
     misc_feature    58..1074
                     /gene="LOC139904095"
                     /note="Enoyl-CoA hydratase/isomerase; Region: ECH_2;
                     pfam16113"
                     /db_xref="CDD:465024"
ORIGIN      
        1 atggctctct caatccagac cgaagcagaa ccggtgattt ttgaagaaat atcaggagta
       61 aggaaagtaa tacttaacag aaaaaagaaa ctaaacagtc tcaactatga tatgctctcg
      121 aaaatgcacg agaaactgaa attgtacgag aatgatccaa cggtgaaact tgtgatattg
      181 aaggcaaacg gtaaagcatt ttgtgctggt ggtgatctga cctccgctat acactttatc
      241 gctctcggac attggagttt cataacgagc ttttatagga aacagttttg tttagactac
      301 gtcctcgcaa cttataagaa accaatggtt gcaattctag acggtagtgt aatgggaggt
      361 ggcgttggaa tatcgataca ttcaacattt agaattgtta ctgagaatac gatttttgca
      421 atgcctgagg catcaattgg gctatttcct gatgttggtg catcttattt tttgtctcga
      481 cttcctggat tcttcggaga gtatatggga ttgactggtg ctcggttaaa cggagcagag
      541 atggttgcgc ttggtctcgg tactcatttt gttccatcca agaacttaat atcaatggag
      601 aaagctcttg aaaatttggt tgcttcatcg aatgcaccaa gcgtagctat gatgtccatg
      661 atcattgaca agttcacaga agaaataaac atcaagccag atagtgcata tgctaggctc
      721 cccctgatca accaatgctt ctctggagga tcatgtgaag aaatattatc ctcattggaa
      781 cacttggcta cagaagttca agagaaatgg atccaaaatg caacaagatc aatgaaatcc
      841 tctactccaa taggtctcaa aattttcttg agaacgataa gaaaaggccg atccaaaaac
      901 atcaaacaat gtcttgagaa tgagtacatt gctatctgta accttacaag caaaaagatt
      961 agccatgact tctatgaggg ccctagagct atgttgatag aaaaagataa gaaaccgcag
     1021 tgggtacctt caaaacttga agacgctagt gacgatatgg tggccaagtt tttttcaata
     1081 gcttttagcg aagatgatga ttggattcct ttaaaactcc catcaagatc taatgaagct
     1141 gctgctgcaa tagcatcaaa actctaa
//
LOCUS       XM_071886032            2425 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NADPH--cytochrome P450
            reductase 2-like (LOC139904096), mRNA.
ACCESSION   XM_071886032
VERSION     XM_071886032.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2425
                     /gene="LOC139904096"
                     /note="NADPH--cytochrome P450 reductase 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 Proteins"
                     /db_xref="GeneID:139904096"
     CDS             67..2181
                     /gene="LOC139904096"
                     /codon_start=1
                     /product="NADPH--cytochrome P450 reductase 2-like"
                     /protein_id="XP_071742133.1"
                     /db_xref="GeneID:139904096"
                     /translation="MQSESIKASTFDLVSAILNGKVMETYNASESGELKMLVENRNLL
                     TLFTTSIAVLIGCAIVLLWRKSFTKKSVNNDLEPHKMIVPKKDLELEIDDGKKRVTIF
                     FGTQTGTAEGFAKALLEEAKVRYEKAVFKAVDLDDFAADDDEYEEKLKKESLAFFFLA
                     TYGDGEPTDNAARFYKWFTEGEEKGEWLNELQYGVFGLGNRQYEHFNKIGLVVDEKLT
                     EQGAKRLVPVGLGDDDQCIEDDFTAWKELVWPELDNLLRDEDDTSVSTPYTAAVLEYR
                     VVYHDKVDSSVEEQSQTNSQSLHDAHHPCRSNVAFIKELHTPESDRSCTHLEFDITNT
                     GLSYETGDHVGVYCQNLSEVVEEAVRLIGIQPDSYFSIHVDKEDGTPIGGASLPPTFP
                     PCTLRTALARYADVLSSPKKSALIALAAHASDPSEADRLKFLASPAGKDEYAQWIVAN
                     QRSLLEVMDAFPSAKPPLGVFFAAVAPRLQPRYYSISSSPKISPNKIHVTCALVHEKT
                     PAGRIHKGVCSTWMKNVVPLTESQDCSWAPIFVRTSNFRLPADPKVPVIMIGPGTGLA
                     PFRGFLQERLALKETGAELGSSIFFFGCRNRNVDFIYEDELNKFVETGALSELIVAFS
                     REGSTKEYVQHKMNQKASDIWNLLSEGAYLYVCGDAKGMARDVHRTLHTIVQQEGSLD
                     SSKAELYVKNLQTSGRYLRDVW"
     misc_feature    367..798
                     /gene="LOC139904096"
                     /note="Region: Flavodoxin_1; pfam00258"
                     /db_xref="CDD:425562"
     misc_feature    964..2178
                     /gene="LOC139904096"
                     /note="NADPH cytochrome p450 reductase (CYPOR) serves as
                     an electron donor in several oxygenase systems and is a
                     component of nitric oxide synthases and methionine
                     synthase reductases. CYPOR transfers two electrons from
                     NADPH to the heme of cytochrome p450 via...; Region:
                     CYPOR; cd06204"
                     /db_xref="CDD:99801"
     misc_feature    order(1030..1032,1570..1572,1576..1578,1750..1755,
                     1846..1851,1936..1941,1954..1956,1960..1962,1966..1968,
                     2041..2043,2053..2055,2062..2064)
                     /gene="LOC139904096"
                     /note="NADP binding pocket [chemical binding]; other site"
                     /db_xref="CDD:99801"
     misc_feature    order(1093..1095,1510..1521,1564..1572,1612..1623,
                     2176..2178)
                     /gene="LOC139904096"
                     /note="FAD binding pocket [chemical binding]; other site"
                     /db_xref="CDD:99801"
     misc_feature    order(1510..1512,1516..1521)
                     /gene="LOC139904096"
                     /note="FAD binding motif [chemical binding]; other site"
                     /db_xref="CDD:99801"
     misc_feature    order(1519..1521,2035..2037,2170..2172,2176..2178)
                     /gene="LOC139904096"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:99801"
     misc_feature    order(1612..1614,1621..1623,1630..1632)
                     /gene="LOC139904096"
                     /note="phosphate binding motif [ion binding]; other site"
                     /db_xref="CDD:99801"
     misc_feature    order(1738..1740,1750..1761,1765..1767)
                     /gene="LOC139904096"
                     /note="beta-alpha-beta structure motif; other site"
                     /db_xref="CDD:99801"
ORIGIN      
        1 tctctatacc aaatattcta ctcataatta attaaattga ttcattgatc aataataata
       61 ataataatgc aatcagaatc cataaaagca tcaacattcg atctggtatc cgcaattctg
      121 aacggtaaag tgatggaaac atataacgca tctgaatcag gagaattgaa gatgctggtg
      181 gagaatcgga atctattgac gttgtttacg acttcgattg ccgtattgat cggttgcgca
      241 atcgttttgt tgtggcggaa atcgtttacg aagaaatcag ttaataatga tttggagcca
      301 cacaagatga ttgttccaaa aaaggatctg gaacttgaga ttgatgatgg caagaagaga
      361 gttactattt tcttcggaac tcaaaccgga accgctgaag gtttcgcaaa ggcacttcta
      421 gaggaagcta aagttagata tgagaaggcc gtgtttaaag cagttgattt ggatgatttt
      481 gctgctgatg acgatgagta tgaggagaaa cttaaaaaag agtcattggc atttttcttt
      541 ttagcgacgt atggagatgg cgagccaaca gataatgctg ctaggttcta taaatggttt
      601 acagaggggg aagaaaaagg agagtggctt aacgaacttc aatatggagt gtttggcctt
      661 ggcaacaggc aatatgagca tttcaataag attggattgg tggtcgatga gaagcttaca
      721 gagcagggtg ccaaacgcct tgttcctgtt ggcctcggag atgatgatca atgtatcgag
      781 gatgatttta cagcatggaa agagttggtg tggcctgagt tggataactt gttacgtgac
      841 gaggatgata catctgtttc cactccttac acggctgctg ttttggaata ccgtgttgta
      901 tatcatgaca aagttgactc gtccgtagaa gagcaaagtc aaacaaacag tcaatccctt
      961 catgatgcac accatccgtg cagatccaat gtggcattca taaaggagct gcacactccc
     1021 gagtctgatc ggtcttgcac tcatctcgaa tttgacatca ccaatactgg actatcatac
     1081 gagacagggg atcatgttgg cgtctactgt caaaatttaa gtgaagttgt agaggaggct
     1141 gtgagattaa taggcataca accggactct tatttctcaa tccatgtcga taaggaagac
     1201 ggaacaccaa ttggtggggc ctctttgccc cctactttcc ctccatgcac tttacggact
     1261 gctttggctc gttatgctga tgtcttaagt tctcccaaaa agtctgcttt gattgcgctg
     1321 gctgctcatg catctgatcc ctctgaagct gatcgattaa aatttctagc gtctcctgct
     1381 ggaaaggatg aatatgctca atggatagtt gcaaaccaac gaagtcttct cgaagttatg
     1441 gatgcattcc catctgctaa acctccactt ggcgttttct tcgcagccgt ggccccacgc
     1501 ttacagcctc gttattattc catttcttct tctccaaaga tttcaccgaa taaaattcac
     1561 gtcacatgtg cattagttca cgagaaaaca cctgcaggcc gtatccacaa aggagtatgt
     1621 tcaacctgga tgaagaatgt tgtacctttg accgaaagtc aagattgtag ctgggcacct
     1681 atctttgtta ggacgtctaa ctttagactt cctgctgatc ctaaagtccc ggttatcatg
     1741 atcggtccag gaactggatt agcaccgttt aggggtttct tacaagaacg attagcgttg
     1801 aaggaaactg gagctgaact cgggtcatct atttttttct tcggatgcag gaaccgcaat
     1861 gtggatttca tatatgaaga tgaattaaac aagtttgtgg agactggtgc tctttctgaa
     1921 cttattgttg ctttttcccg cgaaggatcc accaaggaat atgtgcaaca taaaatgaat
     1981 cagaaggcct cggatatttg gaatttgctt tcggaaggag catatctata tgtatgcggt
     2041 gatgctaaag gcatggccag agatgtacac cgaacccttc acacaattgt tcaacaagag
     2101 ggatctctgg actcatcaaa ggcagaactg tatgttaaga acctacaaac atcaggacga
     2161 taccttcgtg atgtttggta attgttctct tagtatattc aacggtgaaa ggatgcaaaa
     2221 taaaaccata acgacgggtt gggaattctt tcttgtacta gtgatttttt tgatcgtcta
     2281 atgtaattta taagttatag gttcttaatt ggtgtatggt ttaaaggtat tcaaattgtg
     2341 tgttttatat aagcggcaaa catgcatctt tatgaacttg aacgcttgaa actcatttct
     2401 ctatggaata ttgtaaatag ctatt
//
LOCUS       XR_011778654            1068 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904097), transcript variant X1, ncRNA.
ACCESSION   XR_011778654
VERSION     XR_011778654.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1068
                     /gene="LOC139904097"
                     /note="uncharacterized LOC139904097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904097"
     ncRNA           1..1068
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904097"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904097"
ORIGIN      
        1 acctaggttg ctccgaaaca attcaatcga ctaagatgtt gaaaaaagac atgaaacctc
       61 gattacatta gggttttgca ggtctatcaa agcagaatat aaattaggaa gggagaacaa
      121 gagatagtgg aatacaattc tacaacgctt gaatcgatta ttaaacagga aaacgtccgt
      181 tcgtttaatt tttagtaatt taatgttttt ccagatgact gaaatcgaat aattatcttc
      241 aatcggaaat ttgcgtagtg tattcgttaa ggaatcgatc agaggaatca gtgagaagat
      301 ttgaaatata tttgaaaacg gaccaagggt ggatcaaaat attttccacc aaagatcagt
      361 gatggtagat gacgattaca gaaataggtg tctcaccttg tcaatgagga acagatgcag
      421 taagctgaat tgcaaaagga ggatgtttgg aagacaaatc gttcttgatg gccaactctt
      481 acatcgaagc tttgagtact gccatgacat tgatttttga agacaaggta cgttaaattt
      541 tttgctgtct tgttgatata atagaacttt cctatttact tggcttattt acaatttgca
      601 actaacatca ttcgcgaagt atagaagctg gtgaagtttt tgttgagatg ttaaagttga
      661 ctattattca tctaattgat gcacaactac ccttcgattt aatgtcacag aggaatatta
      721 tttcagaatg attcacatta cacataatta tgttaaagat gttatcttgc agctaatacc
      781 attcctatcc atgaaaaagc atctggtatt ggtagttgct gatctcaaat tgtaaggcct
      841 ttaggtttgg ctaaaacgag tctttttttg atgtcactac tactgaaaaa ggactcaaat
      901 cattgctcaa tgtatgataa tattatgtat gatgtatcca acatcgccta tggatcgttt
      961 aatttttact tgcatttaat tttcatgttt gtatttatat atttatattt acatatattt
     1021 gtaaaaagtt cataagaaat tttaattgta tatgatggtt tattacat
//
LOCUS       XR_011778655            1063 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904097), transcript variant X2, ncRNA.
ACCESSION   XR_011778655
VERSION     XR_011778655.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1063
                     /gene="LOC139904097"
                     /note="uncharacterized LOC139904097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904097"
     ncRNA           1..1063
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904097"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904097"
ORIGIN      
        1 acctaggttg ctccgaaaca attcaatcga ctaagatgtt gaaaaaagac atgaaacctc
       61 gattacatta gggttttgca ggtctatcaa agcagaatat aaattaggaa gggagaacaa
      121 gagatagtgg aatacaattc tacaacgctt gaatcgatta ttaaacagga aaacgtccgt
      181 tcgtttaatt tttagtaatt taatgttttt ccagatgact gaaatcgaat aattatcttc
      241 aatcggaaat ttgcgtagtg tattcgttaa ggaatcgatc agaggaatca gtgagaagat
      301 ttgaaatata tttgaaaacg gaccaagggt ggatcaaaat attttccacc aaagatcagt
      361 gatggtagat gacgattaca gaaataggtg tctcaccttg tcaatgagga acagatgcag
      421 taagctgaat tgcaaaagga ggatgtttgg aagacaaatc gttcttgatg gccaactctt
      481 acatctttga gtactgccat gacattgatt tttgaagaca aggtacgtta aattttttgc
      541 tgtcttgttg atataataga actttcctat ttacttggct tatttacaat ttgcaactaa
      601 catcattcgc gaagtataga agctggtgaa gtttttgttg agatgttaaa gttgactatt
      661 attcatctaa ttgatgcaca actacccttc gatttaatgt cacagaggaa tattatttca
      721 gaatgattca cattacacat aattatgtta aagatgttat cttgcagcta ataccattcc
      781 tatccatgaa aaagcatctg gtattggtag ttgctgatct caaattgtaa ggcctttagg
      841 tttggctaaa acgagtcttt ttttgatgtc actactactg aaaaaggact caaatcattg
      901 ctcaatgtat gataatatta tgtatgatgt atccaacatc gcctatggat cgtttaattt
      961 ttacttgcat ttaattttca tgtttgtatt tatatattta tatttacata tatttgtaaa
     1021 aagttcataa gaaattttaa ttgtatatga tggtttatta cat
//
LOCUS       XR_011778656             971 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904097), transcript variant X3, ncRNA.
ACCESSION   XR_011778656
VERSION     XR_011778656.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..971
                     /gene="LOC139904097"
                     /note="uncharacterized LOC139904097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904097"
     ncRNA           1..971
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904097"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904097"
ORIGIN      
        1 acctaggttg ctccgaaaca attcaatcga ctaagatgtt gaaaaaagac atgaaacctc
       61 gattacatta gggttttgca ggtctatcaa agcagaatat aaattaggaa gggagaacaa
      121 gagatagtgg aatacaattc tacaacgctt gaatcgatta ttaaacagga aaacgtccgt
      181 tcgtttaatt tttagtaatt taatgttttt ccagatgact gaaatcgaat aattatcttc
      241 aatcggaaat ttgcgtagtg tattcgttaa ggaatcgatc agaggaatca gtgagaagat
      301 ttgaaatata tttgaaaacg gaccaagggt ggatcaaaat attttccacc aaagatcagt
      361 gatggtagat gacgattaca gaaataggtg tctcaccttg tcaatgagga acagatgcag
      421 taagctgaat tgcaaaagga ggatgtttgg aagacaaatc gttcttgatg gccaactctt
      481 acatcgaagc tttgagtact gccatgacat tgatttttga agacaagaag ctggtgaagt
      541 ttttgttgag atgttaaagt tgactattat tcatctaatt gatgcacaac tacccttcga
      601 tttaatgtca cagaggaata ttatttcaga atgattcaca ttacacataa ttatgttaaa
      661 gatgttatct tgcagctaat accattccta tccatgaaaa agcatctggt attggtagtt
      721 gctgatctca aattgtaagg cctttaggtt tggctaaaac gagtcttttt ttgatgtcac
      781 tactactgaa aaaggactca aatcattgct caatgtatga taatattatg tatgatgtat
      841 ccaacatcgc ctatggatcg tttaattttt acttgcattt aattttcatg tttgtattta
      901 tatatttata tttacatata tttgtaaaaa gttcataaga aattttaatt gtatatgatg
      961 gtttattaca t
//
LOCUS       XR_011778657             976 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904097), transcript variant X4, ncRNA.
ACCESSION   XR_011778657
VERSION     XR_011778657.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..976
                     /gene="LOC139904097"
                     /note="uncharacterized LOC139904097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904097"
     ncRNA           1..976
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904097"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904097"
ORIGIN      
        1 acctaggttg ctccgaaaca attcaatcga ctaagatgtt gaaaaaagac atgaaacctc
       61 gattacatta gggttttgca ggtctatcaa agcagaatat aaattaggaa gggagaacaa
      121 gagatagtgg aatacaattc tacaacgctt gaatcgatta ttaaacagga aaacgtccgt
      181 tcgtttaatt tttagtaatt taatgttttt ccagatgact gaaatcgaat aattatcttc
      241 aatcggaaat ttgcgtagtg tattcgttaa ggaatcgatc agaggaatca gtgagaagat
      301 ttgaaatata tttgaaaacg gaccaagggt ggatcaaaat attttccacc aaagatcagt
      361 gatggtagat gacgattaca gaaataggtg tctcaccttg tcaatgagga acagatgcag
      421 taagctgaat tgcaaaagga ggatgtttgg aagacaaatc gttcttgatg gccaactctt
      481 acatcgaagc tttgagtact gccatgacat tgatttttga agacaagtat agaagctggt
      541 gaagtttttg ttgagatgtt aaagttgact attattcatc taattgatgc acaactaccc
      601 ttcgatttaa tgtcacagag gaatattatt tcagaatgat tcacattaca cataattatg
      661 ttaaagatgt tatcttgcag ctaataccat tcctatccat gaaaaagcat ctggtattgg
      721 tagttgctga tctcaaattg taaggccttt aggtttggct aaaacgagtc tttttttgat
      781 gtcactacta ctgaaaaagg actcaaatca ttgctcaatg tatgataata ttatgtatga
      841 tgtatccaac atcgcctatg gatcgtttaa tttttacttg catttaattt tcatgtttgt
      901 atttatatat ttatatttac atatatttgt aaaaagttca taagaaattt taattgtata
      961 tgatggttta ttacat
//
LOCUS       XR_011778658             971 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904097), transcript variant X5, ncRNA.
ACCESSION   XR_011778658
VERSION     XR_011778658.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..971
                     /gene="LOC139904097"
                     /note="uncharacterized LOC139904097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904097"
     ncRNA           1..971
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904097"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139904097"
ORIGIN      
        1 acctaggttg ctccgaaaca attcaatcga ctaagatgtt gaaaaaagac atgaaacctc
       61 gattacatta gggttttgca ggtctatcaa agcagaatat aaattaggaa gggagaacaa
      121 gagatagtgg aatacaattc tacaacgctt gaatcgatta ttaaacagga aaacgtccgt
      181 tcgtttaatt tttagtaatt taatgttttt ccagatgact gaaatcgaat aattatcttc
      241 aatcggaaat ttgcgtagtg tattcgttaa ggaatcgatc agaggaatca gtgagaagat
      301 ttgaaatata tttgaaaacg gaccaagggt ggatcaaaat attttccacc aaagatcagt
      361 gatggtagat gacgattaca gaaataggtg tctcaccttg tcaatgagga acagatgcag
      421 taagctgaat tgcaaaagga ggatgtttgg aagacaaatc gttcttgatg gccaactctt
      481 acatctttga gtactgccat gacattgatt tttgaagaca agtatagaag ctggtgaagt
      541 ttttgttgag atgttaaagt tgactattat tcatctaatt gatgcacaac tacccttcga
      601 tttaatgtca cagaggaata ttatttcaga atgattcaca ttacacataa ttatgttaaa
      661 gatgttatct tgcagctaat accattccta tccatgaaaa agcatctggt attggtagtt
      721 gctgatctca aattgtaagg cctttaggtt tggctaaaac gagtcttttt ttgatgtcac
      781 tactactgaa aaaggactca aatcattgct caatgtatga taatattatg tatgatgtat
      841 ccaacatcgc ctatggatcg tttaattttt acttgcattt aattttcatg tttgtattta
      901 tatatttata tttacatata tttgtaaaaa gttcataaga aattttaatt gtatatgatg
      961 gtttattaca t
//
LOCUS       XR_011778659             866 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904098), ncRNA.
ACCESSION   XR_011778659
VERSION     XR_011778659.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..866
                     /gene="LOC139904098"
                     /note="uncharacterized LOC139904098; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904098"
     ncRNA           1..866
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904098"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904098"
ORIGIN      
        1 attagcatta gcatatcaca acattagcat atcacaacat aaaagaggct taaactgtct
       61 tttcagtttt tttttttttt ttctttcatt tttgactaat cttgaacttg ataattgatt
      121 gtttttgact gcattacgat tagcattatt actaaaaaat cacaatagaa aaggttgaaa
      181 ctgatttttg aggttttttt tttttttttt tttttttttt tttttttact atttttcctt
      241 tttgaaggcg agtagattcg tacagtgatg ggaagaaatc aggagagaca tggagttacg
      301 gctgggatgt ttaggcatag aacagctaaa ggaatgctac tttcaatcat atatgggcga
      361 tctggaatga aaggttcgtg ttaacgggtt ccaagaaaca ccattgtaca agtttcttgg
      421 tgccaagaat gggggatttt gagggtctgg tatcatatgg aacttcatca agtttcttgt
      481 ggttcaaacc atgcattatt tgactaatca gatgaacttc atgggtcaca ctaatatgac
      541 gtggctattt gactattatt cgacttattt cgatgcagca aacttttgtt ttttatgtta
      601 caagatggaa gtcacaagat gaaagagcca acgcccttca tgatgaaaag caataccggt
      661 taacaccgag cttgactgca agtcggtgag tccaacccaa atcgaggtct gacatgattg
      721 caacaggtgg attgtgatgg ttttgaaacc aatatttaat agggttatga agatcactaa
      781 aagcaaccat caaggcacaa aaacgtcaac ccgctatgca acatacatcc aagttctatc
      841 ctaatcttcc agatgagttg gcttga
//
LOCUS       XR_011778660             811 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904100), ncRNA.
ACCESSION   XR_011778660
VERSION     XR_011778660.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..811
                     /gene="LOC139904100"
                     /note="uncharacterized LOC139904100; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904100"
     ncRNA           1..811
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904100"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904100"
ORIGIN      
        1 atccaattta aacatccgat tcaaaacctt caattggttc gttcaaaatt agggttcact
       61 aaatacccaa atattctatc tctacctaca tccgattaca tcgaagtata tgttcatcat
      121 ctttatcatc aaacaatgtt catcatcata catccgattt gaggtggttg gactcaaacc
      181 accatcgtcg tcgcttctat agccgtcctt gcggcggttg atgccttagg gtttaattca
      241 aacggtcgat accttatgct tacgttttca gattctagca ggaggtttaa ggttgttatt
      301 ccacattgag gcatggaatg catagaaagc tagagttgta gataatctat caatggagtt
      361 tcatacaaaa ggcgagtaga ttcgtacagt gatgggaaga aatcaggaga gacatggagt
      421 tacggatggg atgtttaggc atagaacagc taaaggaatg cttttttctc ataattagtg
      481 gttttgcatc ctgaagttaa aacatgttga ccatttttta caaaatatga acttaacaag
      541 ctatgtagtc accataattg aaccatttat gttgtttttc aacacattat gcagtcatac
      601 agttggacca ttaacattag catattacaa cataaaagag gttgaaacta ttttttgatt
      661 tttttttttt actattttga ccttttggac ttttttacta atttttaact tgataattga
      721 ctgttattga ctgcattatt agtattagca ttattagaac tagcatatca caacgtaaaa
      781 gaggttgaaa cttttttttt tttttttttt t
//
LOCUS       XM_071886033            1200 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta carbonic anhydrase 5,
            chloroplastic-like (LOC139904101), transcript variant X1, mRNA.
ACCESSION   XM_071886033
VERSION     XM_071886033.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1200
                     /gene="LOC139904101"
                     /note="beta carbonic anhydrase 5, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139904101"
     CDS             284..985
                     /gene="LOC139904101"
                     /codon_start=1
                     /product="beta carbonic anhydrase 5, chloroplastic-like
                     isoform X1"
                     /protein_id="XP_071742134.1"
                     /db_xref="GeneID:139904101"
                     /translation="MTLAAGIRSNMTLRLKASSEVVGLVQETNETPPKLITKSNGCID
                     SFTEMKHRFLSFKKQIYLYQALSQAQDPKFLVISYADSRVCPSYILGYQPGEAFVVRN
                     VANLVPPFENGPCETNAALEFSVNTLEVEYVLVTGHSCCGGIRALMSMEDEEKSSSFI
                     KNWVIVGSAARSNTNATTSNLNFNQQCRNCEKESINNSLLNLLTYPWVKERVAKGLLC
                     LHGGYYNFVDCTYEK"
     misc_feature    305..982
                     /gene="LOC139904101"
                     /note="Carbonic anhydrases (CA) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism in which the nucleophilic
                     attack of a zinc-bound hydroxide ion on carbon dioxide is
                     followed by the regeneration of an...; Region: beta_CA;
                     cl00391"
                     /db_xref="CDD:469755"
     misc_feature    order(491..493,497..499,518..520,524..532,566..568,
                     575..577,650..652,665..667,695..697,704..706,953..955)
                     /gene="LOC139904101"
                     /note="active site clefts [active]"
                     /db_xref="CDD:238449"
     misc_feature    order(518..520,524..526,695..697,704..706)
                     /gene="LOC139904101"
                     /note="zinc binding site [ion binding]; other site"
                     /db_xref="CDD:238449"
     misc_feature    order(521..532,536..538,542..553,566..574,578..580,
                     584..586,635..640,647..652,770..772,953..955,959..964,
                     968..970)
                     /gene="LOC139904101"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238449"
ORIGIN      
        1 tcggccgtca taatcacttc ccgatatcaa taccatcatc ttcgccgaca acttccttaa
       61 agtttacaac atgctctccg gcacggagga tgatggcgcc gtcaaacggt aggatagttt
      121 gtatggctct tgatgaagag aacttgactc gtcgtaatcc tctcgatttc cccgttgtca
      181 ctttttttgc attcatgtca caatttagga gattgaagag gatgtgttct ttggcttatg
      241 atcaggtttt agatgttcaa tttcaaattg taagaaatcg agaatgacat tagcagctgg
      301 gatcaggagc aatatgactt tgagattgaa agcctcaagt gaggtagtag gtctggttca
      361 agaaactaat gaaactccac caaagcttat aacgaaatct aacggttgca tcgattcatt
      421 cactgagatg aagcatagat ttttgagttt caaaaaacaa atatatctgt atcaagcact
      481 ttcccaagcc caggacccaa agtttctggt gatatcttat gcagattcaa gagtttgtcc
      541 ctcttacatc ttaggttacc aacctggtga agcgtttgtt gtccgcaatg ttgctaacct
      601 ggtcccaccg tttgagaacg ggccatgtga aacaaatgct gcacttgaat tttcggtgaa
      661 cactcttgaa gttgaatatg tactggtgac tggccatagc tgttgtggag gcatccgtgc
      721 cctaatgagc atggaagatg aagaaaagtc aagtagcttt atcaagaatt gggtcatagt
      781 aggatcggca gcaagatcga acacaaatgc taccacttct aaccttaact ttaaccaaca
      841 gtgcagaaac tgtgaaaagg aatcaataaa taattcacta ttgaatttgc ttacgtaccc
      901 atgggtaaaa gaacgagtag cgaaaggtct gctttgtcta catggtggtt actataattt
      961 tgtagattgt acatacgaga agtagactct tgatagcagt tcagaactgg tcgatatgcc
     1021 atcaagaact gtgaattttg gtcttgatgt tgtattgtat tgtgctcatt cttctatata
     1081 tttgtggcta gatacaaaag ttgtatgtca taagctgttg tctgtggtat attattggat
     1141 agaatttgtg tgttgttatt ggtttgttta cttcatgata taagcatata gtgaaattta
//
LOCUS       XM_071886034            1197 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta carbonic anhydrase 5,
            chloroplastic-like (LOC139904101), transcript variant X2, mRNA.
ACCESSION   XM_071886034
VERSION     XM_071886034.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1197
                     /gene="LOC139904101"
                     /note="beta carbonic anhydrase 5, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139904101"
     CDS             284..982
                     /gene="LOC139904101"
                     /codon_start=1
                     /product="beta carbonic anhydrase 5, chloroplastic-like
                     isoform X2"
                     /protein_id="XP_071742135.1"
                     /db_xref="GeneID:139904101"
                     /translation="MTLAAGIRSNMTLRLKASSEVVGLVQETNETPPKLITKSNGCID
                     SFTEMKHRFLSFKKQIYLYQALSQAQDPKFLVISYADSRVCPSYILGYQPGEAFVVRN
                     VANLVPPFENGPCETNAALEFSVNTLEVEYVLVTGHSCCGGIRALMSMEDEEKSSFIK
                     NWVIVGSAARSNTNATTSNLNFNQQCRNCEKESINNSLLNLLTYPWVKERVAKGLLCL
                     HGGYYNFVDCTYEK"
     misc_feature    305..979
                     /gene="LOC139904101"
                     /note="Carbonic anhydrases (CA) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism in which the nucleophilic
                     attack of a zinc-bound hydroxide ion on carbon dioxide is
                     followed by the regeneration of an...; Region: beta_CA;
                     cl00391"
                     /db_xref="CDD:469755"
     misc_feature    order(491..493,497..499,518..520,524..532,566..568,
                     575..577,650..652,665..667,695..697,704..706,950..952)
                     /gene="LOC139904101"
                     /note="active site clefts [active]"
                     /db_xref="CDD:238449"
     misc_feature    order(518..520,524..526,695..697,704..706)
                     /gene="LOC139904101"
                     /note="zinc binding site [ion binding]; other site"
                     /db_xref="CDD:238449"
     misc_feature    order(521..532,536..538,542..553,566..574,578..580,
                     584..586,635..640,647..652,767..769,950..952,956..961,
                     965..967)
                     /gene="LOC139904101"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238449"
ORIGIN      
        1 tcggccgtca taatcacttc ccgatatcaa taccatcatc ttcgccgaca acttccttaa
       61 agtttacaac atgctctccg gcacggagga tgatggcgcc gtcaaacggt aggatagttt
      121 gtatggctct tgatgaagag aacttgactc gtcgtaatcc tctcgatttc cccgttgtca
      181 ctttttttgc attcatgtca caatttagga gattgaagag gatgtgttct ttggcttatg
      241 atcaggtttt agatgttcaa tttcaaattg taagaaatcg agaatgacat tagcagctgg
      301 gatcaggagc aatatgactt tgagattgaa agcctcaagt gaggtagtag gtctggttca
      361 agaaactaat gaaactccac caaagcttat aacgaaatct aacggttgca tcgattcatt
      421 cactgagatg aagcatagat ttttgagttt caaaaaacaa atatatctgt atcaagcact
      481 ttcccaagcc caggacccaa agtttctggt gatatcttat gcagattcaa gagtttgtcc
      541 ctcttacatc ttaggttacc aacctggtga agcgtttgtt gtccgcaatg ttgctaacct
      601 ggtcccaccg tttgagaacg ggccatgtga aacaaatgct gcacttgaat tttcggtgaa
      661 cactcttgaa gttgaatatg tactggtgac tggccatagc tgttgtggag gcatccgtgc
      721 cctaatgagc atggaagatg aagaaaagtc aagctttatc aagaattggg tcatagtagg
      781 atcggcagca agatcgaaca caaatgctac cacttctaac cttaacttta accaacagtg
      841 cagaaactgt gaaaaggaat caataaataa ttcactattg aatttgctta cgtacccatg
      901 ggtaaaagaa cgagtagcga aaggtctgct ttgtctacat ggtggttact ataattttgt
      961 agattgtaca tacgagaagt agactcttga tagcagttca gaactggtcg atatgccatc
     1021 aagaactgtg aattttggtc ttgatgttgt attgtattgt gctcattctt ctatatattt
     1081 gtggctagat acaaaagttg tatgtcataa gctgttgtct gtggtatatt attggataga
     1141 atttgtgtgt tgttattggt ttgtttactt catgatataa gcatatagtg aaattta
//
LOCUS       XM_071886035            1094 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta carbonic anhydrase 5,
            chloroplastic-like (LOC139904101), transcript variant X3, mRNA.
ACCESSION   XM_071886035
VERSION     XM_071886035.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1094
                     /gene="LOC139904101"
                     /note="beta carbonic anhydrase 5, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139904101"
     CDS             284..763
                     /gene="LOC139904101"
                     /codon_start=1
                     /product="beta carbonic anhydrase 5, chloroplastic-like
                     isoform X3"
                     /protein_id="XP_071742136.1"
                     /db_xref="GeneID:139904101"
                     /translation="MTLAAGIRSNMTLRLKASSEVVGLVQETNETPPKLITKSNGCID
                     SFTEMKHRFLSFKKQIYLYQALSQAQDPKFLVISYADSRVCPSYILGYQPGEAFVVRN
                     VANLVPPFENGPCETNAALEFSVNTLEVEYVLVTGHSCCGGIRALMSMEDEEKSRNQ"
     misc_feature    305..>757
                     /gene="LOC139904101"
                     /note="Carbonic anhydrases (CA) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism in which the nucleophilic
                     attack of a zinc-bound hydroxide ion on carbon dioxide is
                     followed by the regeneration of an...; Region: beta_CA;
                     cl00391"
                     /db_xref="CDD:469755"
     misc_feature    order(491..493,497..499,518..520,524..532,566..568,
                     575..577,650..652,665..667,695..697,704..706)
                     /gene="LOC139904101"
                     /note="active site clefts [active]"
                     /db_xref="CDD:238224"
     misc_feature    order(518..520,524..526,695..697,704..706)
                     /gene="LOC139904101"
                     /note="zinc binding site [ion binding]; other site"
                     /db_xref="CDD:238224"
ORIGIN      
        1 tcggccgtca taatcacttc ccgatatcaa taccatcatc ttcgccgaca acttccttaa
       61 agtttacaac atgctctccg gcacggagga tgatggcgcc gtcaaacggt aggatagttt
      121 gtatggctct tgatgaagag aacttgactc gtcgtaatcc tctcgatttc cccgttgtca
      181 ctttttttgc attcatgtca caatttagga gattgaagag gatgtgttct ttggcttatg
      241 atcaggtttt agatgttcaa tttcaaattg taagaaatcg agaatgacat tagcagctgg
      301 gatcaggagc aatatgactt tgagattgaa agcctcaagt gaggtagtag gtctggttca
      361 agaaactaat gaaactccac caaagcttat aacgaaatct aacggttgca tcgattcatt
      421 cactgagatg aagcatagat ttttgagttt caaaaaacaa atatatctgt atcaagcact
      481 ttcccaagcc caggacccaa agtttctggt gatatcttat gcagattcaa gagtttgtcc
      541 ctcttacatc ttaggttacc aacctggtga agcgtttgtt gtccgcaatg ttgctaacct
      601 ggtcccaccg tttgagaacg ggccatgtga aacaaatgct gcacttgaat tttcggtgaa
      661 cactcttgaa gttgaatatg tactggtgac tggccatagc tgttgtggag gcatccgtgc
      721 cctaatgagc atggaagatg aagaaaagtc aaggaatcaa taaataattc actattgaat
      781 ttgcttacgt acccatgggt aaaagaacga gtagcgaaag gtctgctttg tctacatggt
      841 ggttactata attttgtaga ttgtacatac gagaagtaga ctcttgatag cagttcagaa
      901 ctggtcgata tgccatcaag aactgtgaat tttggtcttg atgttgtatt gtattgtgct
      961 cattcttcta tatatttgtg gctagataca aaagttgtat gtcataagct gttgtctgtg
     1021 gtatattatt ggatagaatt tgtgtgttgt tattggtttg tttacttcat gatataagca
     1081 tatagtgaaa ttta
//
LOCUS       XR_011778661            1107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904102), ncRNA.
ACCESSION   XR_011778661
VERSION     XR_011778661.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1107
                     /gene="LOC139904102"
                     /note="uncharacterized LOC139904102; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904102"
     ncRNA           1..1107
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904102"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904102"
ORIGIN      
        1 atacgatatg tatcaacaaa agtatcaaca acatgatgaa acccgagcac atttccaaat
       61 tagcgtgtga acctgttgtg cattactact ggaagtgaaa tactgaaatc cgatttcata
      121 tcaaccagat tcgtatattt caaaacctat ctcaaatgat acatcaacta tctgctgcac
      181 ctaaaaccaa taatcattca ttcaatttgt atgaaggttt tatttattac ctgtttgaac
      241 ggtctatatt tcatgaaaag aaggcatttg tgagtctttg cgttgctgtt ttactcgata
      301 accttatatg gaaacttagt atatcaagat aaattgaagg cataccgtct tttgaggagg
      361 acccatacaa agatgtatgg acgtctctac tcccattatt ctcgtgtttg gcttgctctc
      421 gatgtgttga ataagatagt catgatgagt ttcgtcaatg gttagaacgg atctcaaggg
      481 tgaggatatt aatgttggta gtttgatcta tgaaaattag aaatggttta ctgaagaaaa
      541 aaaaataaac aagaggtagt tttttttttt tttttttaca cttaccatgt aactgggggt
      601 gtggattgct tagtatggct tggctcgggt atgtactatc taaaattaat ttcgtttgta
      661 ttctattgtc aatacttatc ctcataagaa acaatgtttt actgtgtctg atttcaaatg
      721 gtgccaggtt tgttggctcg ggttcaacct caaagtatca ctgtacgatc ttttgaagtc
      781 ctaaaggttt actacgaact tgatgagtgg aggaagtaag ttgatggtta agacattaaa
      841 gttgttgtgt tgactaactc tgcccatcag gtgacctcat ccagcgaaaa ctaaagcatt
      901 atccaactgt tggtgtctta ggtggtcctg acagtgtggc attgtgctta tttgctgctg
      961 actcagaaaa gtatttgatt atatgatgct tcctcataga taaatgatgc cgacgacgag
     1021 ttattggcaa taatatcata gtccgattac gtgaatttgc gggttataat caatatagga
     1081 tgtggataat atttgttgac atgtgta
//
LOCUS       XR_011778662             472 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904103), ncRNA.
ACCESSION   XR_011778662
VERSION     XR_011778662.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..472
                     /gene="LOC139904103"
                     /note="uncharacterized LOC139904103; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904103"
     ncRNA           1..472
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904103"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904103"
ORIGIN      
        1 aagatggtta ttgtaaaaca ctttactcgg actactatga tcgattaggc tcaacatcat
       61 ccaatctccg atccacatct ttatactaca tcttgggagg aagttttaga acgtgttaat
      121 gcttagctgc tgcgatggga ggaaattcaa caatatatcg atcaaattgg agttggtgta
      181 cacttcaacc cgtttgtttc ttggaacaac aaggtgcgta taatcgtagt caatatggat
      241 atagaaatgt caacttaatg gccgtctcct cttctgcgct gctaccacgt aggttttact
      301 tctgttctca ttattaagct tgtctaaatt ttaccgttgg agctgttctt aaagagatat
      361 aaaaagtctt gctcatcttc aacactaagt tgtactattg ctaccgataa aacttttcct
      421 aatgttatac tgtaagaatt actgataaca aatgagaccc ttttttactt ca
//
LOCUS       XM_071886037             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CASP-like protein 2C1
            (LOC139904104), mRNA.
ACCESSION   XM_071886037
VERSION     XM_071886037.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139904104"
                     /note="CASP-like protein 2C1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904104"
     CDS             75..620
                     /gene="LOC139904104"
                     /codon_start=1
                     /product="CASP-like protein 2C1"
                     /protein_id="XP_071742138.1"
                     /db_xref="GeneID:139904104"
                     /translation="MDIMKLEAFLRVFAILLFLTAACLVRFDTQTSLIFTSYSQTATY
                     KDLNALYVFVFIDIAVAAFNMIQLVIRGLCSSHLKQDIKGTYKHLAWLSFLFDQAVVY
                     MVFAATTTALVASLYAVTGEHHLFWMKVCDKYTRFCTQIGGALLCGYAAFLLMAIVTS
                     ISAFGLFRHYSPRKFLLLKKK"
     misc_feature    87..536
                     /gene="LOC139904104"
                     /note="Casparian strip membrane protein domain; Region:
                     CASP_dom; pfam04535"
                     /db_xref="CDD:367980"
     polyA_site      795
                     /gene="LOC139904104"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgagaacttg tccaaagctt ccccaactac cataaaactc taaatttgaa agagaaatat
       61 agaaggcaaa gtagatggat attatgaagt tggaggcatt tctaagggtg tttgcaatct
      121 tgctctttct cactgctgct tgtttggtta gatttgatac ccaaacctcc ttaattttca
      181 cttcatactc tcaaaccgct acttacaaag acctgaacgc tctttatgta ttcgtgttca
      241 tagacatagc agttgcagca tttaacatga ttcaactagt aatcagaggt ctgtgctcat
      301 cacatttgaa acaagatatc aagggtacat acaagcatct tgcttggctc tcattcttat
      361 ttgatcaggc agtcgtgtac atggtatttg cagcaaccac aactgctctc gtggcctcat
      421 tatacgcagt caccggcgaa catcatttat tttggatgaa agtatgcgac aaatataccc
      481 gattttgcac tcaaattggt ggcgcgttac tttgcggtta tgctgctttc ttgttgatgg
      541 ctatagttac gtccatttcg gcttttggtc tttttagaca ctattcacct cgaaaatttc
      601 ttctactaaa gaagaaataa tgaaacatat atacttatat cacttttgtt aagtgctact
      661 ttaattaatt ccatatatgt aatttggaga ggaactataa ttaaatgtat aaatcatcat
      721 atacgttaaa tgatgtacct ttaactggtt ggtgttacat gcatgtgatt gaattcaggg
      781 gtaggttgtg ctcaa
//
LOCUS       XM_071886038             531 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pathogenesis-related protein
            PR-1-like (LOC139904105), mRNA.
ACCESSION   XM_071886038
VERSION     XM_071886038.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..531
                     /gene="LOC139904105"
                     /note="pathogenesis-related protein PR-1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139904105"
     CDS             1..531
                     /gene="LOC139904105"
                     /codon_start=1
                     /product="pathogenesis-related protein PR-1-like"
                     /protein_id="XP_071742139.1"
                     /db_xref="GeneID:139904105"
                     /translation="MLFPNLAPLIILLFFHTLLISNSIYAITHQKLRTQPRVNAINQF
                     LTTQNKARAALHMRPLVWDAGLAKYADMYARQRRQDCLLKHSNGPFGENIFWASGDGW
                     TPAEAAVAWVAEKRWYNYRSNSCGGGRECGHYTQVVWKNTKRIGCARVTCFGGRGVFM
                     TCNYFPPGNYIGERPY"
     misc_feature    127..528
                     /gene="LOC139904105"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain of
                     pathogenesis-related protein 1 (PR-1) family proteins;
                     Region: CAP_PR-1; cd05381"
                     /db_xref="CDD:349400"
ORIGIN      
        1 atgttgtttc caaacttagc tcctttaatc atcttgcttt tctttcatac tctcctcatt
       61 tcaaactcta tttatgcaat cacacaccaa aaactaagaa ctcaacctcg agtcaatgcc
      121 attaatcaat tcttaactac acaaaacaag gcccgcgcag ccttgcatat gagaccacta
      181 gtgtgggacg cagggcttgc aaagtatgct gacatgtatg ctagacaaag aagacaagat
      241 tgtttattaa agcattcgaa tgggcctttt ggggagaata tattttgggc gagtggcgat
      301 gggtggaccc cggcggaagc agcggtggca tgggtggcgg agaaacggtg gtataactat
      361 cgctctaatt cttgtggtgg gggaagggaa tgtggacatt atacacaagt tgtgtggaaa
      421 aataccaaaa gaattggatg tgcaagagta acttgttttg gaggcagagg tgttttcatg
      481 acatgtaatt attttcctcc ggggaattat atcggcgaga ggccttattg a
//
LOCUS       XM_071886039            1261 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            CONSTANS-LIKE 5-like (LOC139904106), mRNA.
ACCESSION   XM_071886039
VERSION     XM_071886039.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1261
                     /gene="LOC139904106"
                     /note="zinc finger protein CONSTANS-LIKE 5-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904106"
     CDS             55..1143
                     /gene="LOC139904106"
                     /codon_start=1
                     /product="zinc finger protein CONSTANS-LIKE 5-like"
                     /protein_id="XP_071742140.1"
                     /db_xref="GeneID:139904106"
                     /translation="MRTVDGVKCFPVSWNVPGKLCDTCKTAAALLFCRKDKLFLCLAC
                     DLKIHSHTRHERVWMCEVCQQAPASVTCKADAAALCVTCDTDIHSANPLSRRHDRIPI
                     VPFHDCADILMKSSACSFLETNGNCNGNGNGNDDLISSVTNDDEIDWRIPADMKSVAM
                     LFTESDHLFDFEFPAPADSSIQSQFHDSVNDSVVPFHTASPEKLFQQSENRYEIDFTR
                     SNINSYTKNSYITQSFSHSVSSSSIDAGVVTEGNSMSEISRPFVLQVKSGCEMNGVNE
                     SQQPMQLSGTDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTESE
                     ELDADRWLLSASGVDVEYGVVPSYSRDF"
     misc_feature    112..231
                     /gene="LOC139904106"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; Region: Bbox1_BBX-like; cd19821"
                     /db_xref="CDD:380879"
     misc_feature    232..360
                     /gene="LOC139904106"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; Region: Bbox1_BBX-like; cd19821"
                     /db_xref="CDD:380879"
     misc_feature    916..1044
                     /gene="LOC139904106"
                     /note="CCT motif; Region: CCT; pfam06203"
                     /db_xref="CDD:461849"
     polyA_site      1261
                     /gene="LOC139904106"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttatcaatca atcgaacttt ctagagataa cacacaaata tcatatcaaa aatcatgaga
       61 acggtggacg gcgtcaagtg ttttccggtg agctggaacg tgccagggaa gctatgtgac
      121 acgtgtaaaa ccgccgcagc gttactattc tgccgtaagg acaagctgtt cttgtgtctc
      181 gcgtgcgatt tgaaaataca cagccataca cgccatgaac gtgtatggat gtgtgaagtt
      241 tgtcagcaag cacctgctag tgtcacgtgc aaagcagatg ctgctgcgtt atgtgtcacg
      301 tgcgatacag atatacattc agctaatccg ctttctcgta ggcatgaccg tataccgatt
      361 gttccgtttc acgattgtgc agatatacta atgaaatcat ctgcgtgtag ttttctagaa
      421 actaacggaa actgtaacgg taacggtaac ggaaatgatg atttgattag ttctgtaacg
      481 aatgatgatg aaattgattg gagaattccg gcggatatga aatcggtcgc gatgttattt
      541 acagaatccg atcatctttt cgatttcgag tttccggcac cggcggattc aagtatacag
      601 agtcaatttc atgattcagt taacgacagc gtagttccat tccacacggc gtcaccggag
      661 aaactgtttc aacagtcgga aaatcgatac gagatcgatt tcactagatc taatattaat
      721 tcgtacacta aaaacagtta tataacgcag tcgttcagtc atagtgtatc gtcatcttca
      781 attgacgccg gagttgtgac ggaaggaaac tcgatgtcgg agatatctcg tccgtttgtg
      841 ctacaagtga aaagtggatg tgagatgaac ggagtcaacg aaagtcaaca accgatgcaa
      901 ctgtccggta ccgatagaga agctagggtt atgaggtata gagagaagag gaagaacagg
      961 aagtttgaaa aaactattag atacgcttca cgaaaagcgt atgcggaaac acggcctcgt
     1021 atcaaaggac ggtttgctaa gcgtacggaa tcggaagaat tggatgcaga taggtggttg
     1081 ttatcggcgt ctggtgtgga tgtggagtac ggcgtcgttc catcttatag ccgggatttt
     1141 tgatattata tttccttttt aatcccggtg aagttgtatg acagtataag ttataatgtg
     1201 aaaattagat tgtcttctaa tctggagtaa ttattaatga ttaatgatgg agtagtgact
     1261 a
//
LOCUS       XR_011778663            1744 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904107), ncRNA.
ACCESSION   XR_011778663
VERSION     XR_011778663.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1744
                     /gene="LOC139904107"
                     /note="uncharacterized LOC139904107; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904107"
     ncRNA           1..1744
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904107"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904107"
ORIGIN      
        1 aacattttga accattcatc acgttcaatc tatttgattg tttcattcta agctattttt
       61 ttcaaagata aggtaaccta aatccaacca ttgattatca agccgttgca atcccatccc
      121 ttacatttcc ttgtgcaatt ttttaatttg atgtgatggc caaagagata tgtttcgttc
      181 tttctctatc aaatgttgca aatgggtaag taaaccataa gttgctctaa ttgctaatga
      241 gtacttaaaa ggtgtgtttc tttaaaggca tgacattgtt tcttacaaaa gtttaatgct
      301 aggtacatta cttttgttta tggttgttgg attcaggaac atgttgctgc cgaggttgaa
      361 attgggaata tggatagtta caattataag gacaaaaatg ggagggttgt tctttttgtg
      421 agggattttc attttaagtg agtatgataa tgagaattaa aaataaaaaa taaaaatgtc
      481 ttctttttca atgttttttt attgaggttg caatttcgac ccgtcaaggg ttaactcagg
      541 tttaagttga tgatgaagaa ggaacaatag tgatttggat gatgatggat tgggtgggat
      601 gttgaatgac acggaagtga tggattggtt gggatgttga atcaacttca tgttagtgtg
      661 catttatcct cgtgtctgat tagaaaatgt taccatcaag tatctaagtt tgttatgtca
      721 atgtgcagat gaaataagag tccacttgat taagcgaggg tatctgtcaa ctggatacta
      781 attaaactac aataagaagg taaatcatcc cacttgtcaa atttcctttc aacctctcaa
      841 gacccatcag gtatttgaat ttcatcacac aatactaata cttatggtac acataatatt
      901 agatgaattg ggcatgcccg actctatttt aacaattatc accaagtata tgtttgctaa
      961 aataaacttg ttccatgatg cagtcgtata atatgttagc taactatgaa tgtatcaaca
     1021 ttcagtgaca gatgaaactc ttttaaagaa atgtacggta tacctgttta agccatggga
     1081 tgtatcgaag aattgaaaca actttggagt tgtattatgg gttctaaaca ttgtcgacga
     1141 gttcatttaa atagcagaca gacgttttta aaattgaatt tggtgccaat ttcttctatc
     1201 ttaacataag attccggtca aattctagat gtagatatta aatggatata ctttatatat
     1261 gaatgcatat gcttagtgtg actcattaga tgaatgtaaa tgttagaact gtgggttttt
     1321 taacgcttta ctaaccataa tggttcagcc agacatccaa aacccgagta ccgataggta
     1381 aaccttcatt tgtttttatt ttaggtatgt gagtgctaat ggagtgaatt ttattaagaa
     1441 ttcgtaacat gggatggttc ggttaagggt cgaaatggca gcttcttagg gttcttccat
     1501 gaatccactt tcgcttctat attgctggaa aacttttgtt cacgctactt tgacaattgg
     1561 cgttatacga atgtgccatg tgacatactt cttgattcat caactggagc gtaatcagaa
     1621 aaccatcagt ttccagcttg tggtgtttgg aggatatata gcttctttct tatttggtat
     1681 gtttagatga aaatcatgtt aaaagtctaa agtatgatta aaattttatc atgtatagat
     1741 aaag
//
LOCUS       XR_011778664             508 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904108), ncRNA.
ACCESSION   XR_011778664
VERSION     XR_011778664.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..508
                     /gene="LOC139904108"
                     /note="uncharacterized LOC139904108; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904108"
     ncRNA           1..508
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904108"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904108"
ORIGIN      
        1 agagagcagg aaggaagaaa gagacggatg aacaagaaga cctagggttt tccaaaattt
       61 attggattga tctcatgcaa gcaaggattt gagcataaaa gagtgttagt aacttaaggg
      121 aagcaagaaa accattatca acttcctttt tcatcaattt caagttagga ttcttaagag
      181 aaactttgag gtgctaatca aggaacggaa gtaatgcttg gaaaacaagt ggaccaaggt
      241 tcccgtaagc atcgtgaggg taaagaggcc atgaaggaat agaggagttt tggcatattt
      301 ggggtatgca agtctcgttc agctaacgct tttgatttac cgcttttttg acgccgtggg
      361 ttatttttga tgttgcacgc tatgtattta atgtatggtc aatgaatttg caaagttacg
      421 tacatgcaag gccatctaag tcaaaattaa agaaaaggcc attcatgaaa tttctgacaa
      481 acttcaagga ccaagcatgt aattttgt
//
LOCUS       XM_071886040            1475 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides diacylglycerol kinase 4-like
            (LOC139904109), mRNA.
ACCESSION   XM_071886040
VERSION     XM_071886040.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1475
                     /gene="LOC139904109"
                     /note="diacylglycerol kinase 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139904109"
     CDS             1..1413
                     /gene="LOC139904109"
                     /codon_start=1
                     /product="diacylglycerol kinase 4-like"
                     /protein_id="XP_071742141.1"
                     /db_xref="GeneID:139904109"
                     /translation="MRIPKDELRRKITMPDYLRLAIREAIDAKDIDIGKQYYEASLLS
                     VVPTGGDGGGGGGGDTTPPVAPESPLVVFVNSKSGGRHGSELISRLQDFMGDEQVFDL
                     QNVKPHEFVQYGLACLESFAALGDCCAKESRERLRVIVAGGDGTVGWVLGCLGELSKQ
                     GREPVPPTAIIPLGTGNDLSRSLGWGGSFSIKWKAAIKRVLARAIHAPLARLDSWNII
                     ISMPAGIELDTPHAMKQTEEVVLDQDLENEGQLPEEVSCYQGVFYNYFSIGMDAQVAY
                     GFHHLRNEKPYLAQGRIANKIIYSGYTCKQGWFFTPCINDPKLRGLKNILRMHIKRLN
                     NPTWELIPLPSNIRSVVALNLDSYASGRNPWGKLKPEYLEKKGFVEANLDDGLMEIFG
                     FKQGWHASFVMADLISAKHIAQAAAIRFELRGGAWKEGFMQMDGEPWKQPINTEYSTF
                     VDIQRVPFQSIMVKGENNHS"
     misc_feature    205..621
                     /gene="LOC139904109"
                     /note="Diacylglycerol kinase catalytic domain; Region:
                     DAGK_cat; pfam00781"
                     /db_xref="CDD:425868"
     misc_feature    781..1314
                     /gene="LOC139904109"
                     /note="Diacylglycerol kinase accessory domain; Region:
                     DAGK_acc; pfam00609"
                     /db_xref="CDD:459866"
ORIGIN      
        1 atgagaattc caaaagatga attaaggaga aagattacaa tgcctgatta tttacggttg
       61 gctattcgtg aggccattga tgctaaagat attgatatcg gaaaacaata ttatgaagcc
      121 agtctacttt ctgttgttcc caccggtggt gatggtggtg gtggtggtgg tggtgataca
      181 acgcctccgg tggcgcctga atcgcctttg gttgtttttg ttaattctaa aagcggtgga
      241 cgtcatggct ctgaacttat atctagattg caagatttca tgggtgatga acaggttttt
      301 gatcttcaaa atgtgaagcc tcatgaattt gttcagtacg ggttagcttg tcttgaaagc
      361 tttgctgctc ttggagactg ctgtgccaaa gaaagtcgtg aaagattaag agttatcgtt
      421 gcaggaggtg atggtactgt gggttgggtc cttgggtgcc ttggggagct cagcaaacag
      481 ggtcgagaac ctgttcctcc gactgcaatt atacctctcg gtacaggaaa cgacctgtcc
      541 aggagtttgg gttggggtgg ttcgttttca atcaaatgga aagcggccat taagagggtt
      601 ctcgcccgtg ctattcatgc tccacttgct cgtcttgata gttggaacat tataatttca
      661 atgccagctg gcatcgaact ggatacccct catgccatga aacaaacaga agaggttgtt
      721 cttgatcagg atttagaaaa tgaagggcaa ttgcctgagg aagtctcttg ctaccaagga
      781 gtcttctaca actattttag tataggaatg gatgctcaag tggcttatgg ttttcatcat
      841 ctacggaatg agaaacctta tcttgcacaa gggcgtattg caaacaagat aatatactct
      901 ggatacacct gcaaacaagg atggtttttc acgccttgta taaatgaccc gaaattgagg
      961 ggattaaaga acattttaag gatgcatatt aaaagattaa acaacccaac ttgggagtta
     1021 attcctctac catcaaatat tagatctgta gttgctttga atcttgatag ctatgcaagc
     1081 ggaagaaatc catggggtaa gttgaagccg gaatatttgg aaaagaaagg ctttgttgag
     1141 gctaatttgg atgacggtct catggaaata tttggattca aacaaggatg gcatgcatca
     1201 ttcgttatgg ccgatttgat ttcagcaaaa cacattgcac aggcggctgc aatccgattt
     1261 gagttaagag gaggagcatg gaaagaaggt tttatgcaga tggatggaga accatggaaa
     1321 caaccaataa acaccgagta ttcgacattt gtggacattc aaagggtacc atttcaatcc
     1381 atcatggtta aaggagagaa caatcattca tgattactta aatatgtggt gtaaaacttg
     1441 acccgaatcg ttatgaaagg atttaacagt cgaat
//
LOCUS       XM_071886041            3532 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SUPPRESSOR OF MAX2
            1-like (LOC139904110), mRNA.
ACCESSION   XM_071886041
VERSION     XM_071886041.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3532
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3532
                     /gene="LOC139904110"
                     /note="protein SUPPRESSOR OF MAX2 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139904110"
     CDS             230..3313
                     /gene="LOC139904110"
                     /codon_start=1
                     /product="protein SUPPRESSOR OF MAX2 1-like"
                     /protein_id="XP_071742142.1"
                     /db_xref="GeneID:139904110"
                     /translation="MRAGLSTIQQTLTPDAATILNQSISEAGRRNHGQTTPLHVASTL
                     LSSPTGFLRQACIRSHPNSSHPLQCRALELCFSVALERLPTATSSPAVTEPPISNALM
                     AALKRAQAHQRRGCPEQQQQPLLAIKVELEQLIISILDDPSVSRVMREASFSSPAVKA
                     TIKQIINNNNSSSNNNNSISGGGSPIPSTIGIGFRPSSITITGPVSIPGNPNLYLNPR
                     LQKNEESPRNLYLNPRLQLQQQTQQRQQQGTENRFLNQSGQQKNDDVNRVIEIMTKPK
                     KRNPILVGELEPEAIRKEILRRIENDEFVTEGALKSVEVISIEKEFVSVSDKSTIPVK
                     IKELGDLIDKRIASLEGAKGIVVDLADLKWLVEQPSATIVTSAGRQSVGEMANLITRF
                     YGEKVWLIGTATCETYLRCQVYHPNMETEWDLQAVPITSRSPIPTMFSRMGTNGVLGS
                     SVESINSLKNFSTTMNLDTNRKLPCCPKCSNDYEQELVKLKESEKPSDEVKSSLPQWL
                     QNAKPKEQSPVKDQETVLKMRIQELQQKWSDTCSRLHPNYNQTPRLDRIVPMVVPLTG
                     AYKPNMLLRQSQPGQQQPRLQPPKSLQEALQPSRQPRLEPPRSPVRTDLALGLKEPTI
                     LKENEDLAVKDLLGCISSEPQKAKFANSADTDSFKKLLKGLMKKAWWQPEAASTIATT
                     ITQCKVDSGSRGCVWLLFVGPDRVGKKKMASVLAEHVSGTRPITIGLGSRRDGEDTDT
                     GFRGRTVVDRIADAVRRNPSGVIVLSDIDEADMLVRGSIKRAMERGRLTDSHGREISL
                     GNVVFVLTGNWSTANTDVVDEQRLHSLASRDWELKLAVGERRFKRKANWLSENEWSKR
                     SRKDSGLDLSLDLNLATDYEEDRTDGSINLSNLTVEQGDENQQFGVMSVPHELLGPSD
                     GVVVFKPVNFGCISREIEKTVKNAFSTVVDEKITIQVNEAAIENILGGLWFGRTSLEE
                     WAEHVLVPSFHQLNARLPSLKDDVMIRLESDRDPVQVNGGGDWLPSKIAVVVDGL"
     misc_feature    263..>721
                     /gene="LOC139904110"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpA; COG0542"
                     /db_xref="CDD:440308"
     misc_feature    2237..2653
                     /gene="LOC139904110"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    <2243..3109
                     /gene="LOC139904110"
                     /note="Clp protease ATP binding subunit; Region: clpC;
                     CHL00095"
                     /db_xref="CDD:214361"
     misc_feature    order(2348..2356,2405..2407,2411..2416,2525..2530)
                     /gene="LOC139904110"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:410865"
ORIGIN      
        1 gaacgtctct ttctttatca tcatcctcag tccacataga aattatgatg gtgggtcttc
       61 tcaatttata aggtttgcaa atttcttctt tttccccaat attcaaattc attcttgaat
      121 cttgaatttc tctaacccac aaaattccaa cttctgggtt ttgttaaatt acttattttt
      181 cttaaaaccc agctcaatct ttaattatta ttgtaaaagt atatatatta tgagggctgg
      241 attaagtaca atccaacaaa ccttaacgcc ggacgcggca accatcttaa accaatcaat
      301 atcagaagcc ggccggcgaa accacggcca aacgacgccg cttcatgtcg cttcaactct
      361 tctttcttca ccaactgggt ttctccgaca agcctgtatc cggtcccacc caaattcatc
      421 gcacccactt cagtgccgtg ctttagaact ctgtttcagc gttgcactcg aaagactccc
      481 gactgccacg tcatctccgg cagtcacaga accaccgatt tctaacgccc tgatggctgc
      541 cctgaaacgt gcacaagctc atcaacgacg tggctgcccg gagcaacaac aacaaccctt
      601 attagccatt aaagttgagc tcgaacaact gattatatcc attttagatg acccgagtgt
      661 cagtcgggtc atgcgtgaag caagtttttc tagcccagct gttaaagcca caatcaaaca
      721 aataataaac aataacaaca gcagcagcaa taacaataat tcaatttccg gcggtgggag
      781 tccaattccg tcaactatcg gaatcggatt ccggccctct tccattacta taaccggccc
      841 agtatccata cccggaaacc cgaacttgta tctgaatcca cggttgcaaa agaacgaaga
      901 atcaccaagg aatctttatt taaatccgag attacaatta caacaacaaa cacaacaacg
      961 acaacaacaa gggactgaaa accggttttt aaatcaatct ggacagcaaa aaaatgatga
     1021 cgtaaacaga gttattgaga ttatgacaaa acccaagaaa cggaatccga ttctagtagg
     1081 cgaattggaa ccagaggcta tacgtaaaga gatcttgaga cgaatcgaga acgatgagtt
     1141 cgtaacagaa ggggcgttga aaagcgttga agtgatttca atcgaaaaag aatttgtttc
     1201 tgtatcagat aagtcaacta taccggtcaa gattaaggaa ttaggcgatt taatcgataa
     1261 aagaattgcg agtttggaag gtgctaaagg gatagtagtt gatcttgctg acttgaaatg
     1321 gttggttgag caaccgtctg caacgattgt gacgtcagct ggtcgtcagt ccgttggtga
     1381 gatggctaat ttaataacga gattttatgg ggaaaaagtt tggttaattg gtaccgctac
     1441 ttgtgagact tatttaagat gtcaagttta tcatccaaat atggaaactg aatgggattt
     1501 acaagctgtt ccaattacat ctagatcacc tatcccaact atgttttcga ggatggggac
     1561 aaatggtgtt cttggtagtt cggttgagtc aataaattcg ttaaagaatt tttcaacaac
     1621 tatgaatttg gatactaatc gaaagttacc gtgttgtcca aagtgttcga atgattatga
     1681 acaagaacta gtgaaattga aggagtccga gaaaccgtcc gacgaggtta agagtagttt
     1741 acctcaatgg ctgcagaatg ctaaacctaa agagcaatct cccgttaagg atcaagaaac
     1801 agttttgaaa atgaggattc aagaattaca gcaaaaatgg agtgatacgt gttcaagact
     1861 tcatccgaat tacaatcaaa ctccgagatt ggatagaatt gtaccgatgg ttgtaccatt
     1921 gactggagct tataagccga acatgcttct aagacaaagt caacccggtc aacagcagcc
     1981 acggttacaa ccacctaaaa gtcttcaaga ggctttgcaa cctagccgac agcctcggtt
     2041 agagcctcca cggagccctg ttcgtaccga tctagctctt ggattaaagg aaccgacgat
     2101 tttgaaagaa aacgaggatt tggctgttaa ggatctttta ggctgcatat cttcggaacc
     2161 acaaaaggct aaatttgcca actcagcaga caccgactcc tttaagaaac ttctcaaggg
     2221 tcttatgaaa aaagcttggt ggcagccaga ggctgcatcc actatcgcga caacgataac
     2281 acaatgcaaa gtagacagtg gttcgagggg ttgcgtgtgg ctattgttcg tcggtcctga
     2341 tagggttggt aaaaagaaga tggcgtcggt tttagcggag cacgtgagtg ggacccgccc
     2401 gatcactata ggacttggtt cgagacgtga cggtgaggat acggatacgg gttttcgtgg
     2461 gagaactgtg gtcgatcgga ttgctgatgc ggttagaaga aacccgtctg gtgtgattgt
     2521 gttatcggat atcgatgaag ccgatatgtt ggttcgtgga agtataaaac gggcgatgga
     2581 acgaggaagg ttaacggatt ctcacgggcg tgaaattagt cttggtaatg tcgtgtttgt
     2641 gctaaccggg aattggtcaa ccgccaacac ggatgtagtc gatgagcaac ggttgcactc
     2701 gttagcaagc cgtgattggg agttgaagtt ggccgtgggt gagagacggt ttaaacggaa
     2761 agcaaattgg ttgtccgaga atgaatggtc aaaaagatcg aggaaagatt cgggtttaga
     2821 cctttcactt gatcttaacc tagccacgga ctatgaggaa gaccgaaccg atggctcaat
     2881 aaacttgagc aacctaacag tcgaacaagg agacgagaat caacaatttg gagttatgtc
     2941 cgtgcctcat gagctattag gacccagcga tggtgtggtt gtattcaagc cagtcaattt
     3001 cgggtgcatc agtcgcgaaa tagagaaaac agtgaagaat gcattttcga ctgtagttga
     3061 cgagaaaatt acgatccagg tgaacgaggc tgcgatcgag aacatattgg gcgggctatg
     3121 gttcgggcga acaagtctag aggaatgggc tgaacacgtg ttggttccga gcttccacca
     3181 gctgaacgcg cggttaccat ctttaaaaga tgacgtgatg attcggttag agtcagatcg
     3241 tgatccggtt caagtgaacg gtggtgggga ttggttaccg agcaaaattg ctgtggtggt
     3301 tgatggactg taattttgta actttttttt ttttttggct tcatatatga ccatatatgt
     3361 aaatagttgg ggaaaagaga ggtatagtga aactttagaa aaaggtgagg gaatttacgg
     3421 ttctaagatt tcccttttta agaattgttt attttcttaa tatataaaat attcaaggta
     3481 attattacga ctatatctat gttttagcaa taaaagatat tgtagtgttt gg
//
LOCUS       XM_071886042             450 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904112), mRNA.
ACCESSION   XM_071886042
VERSION     XM_071886042.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..450
                     /gene="LOC139904112"
                     /note="uncharacterized LOC139904112; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904112"
     CDS             3..290
                     /gene="LOC139904112"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742143.1"
                     /db_xref="GeneID:139904112"
                     /translation="MFPTMVEFSLEDLLIKGAVFVLVQGLVYLILSNSSDVFSKSKMI
                     RSFSFKPARSVSIRRMFAAIADMPSGGEMSPSSSTRGFPFSSLEDDVKKFD"
ORIGIN      
        1 aaatgtttcc tacaatggtt gagttttcgt tggaagatct attgatcaaa ggtgcggttt
       61 tcgtacttgt tcaaggattg gtttatctca tcttgtcgaa ttcatctgat gtgttctcga
      121 agtcaaagat gatcaggtca tttagcttca aaccggcacg atcagttagt attcgtagga
      181 tgtttgctgc cattgcagat atgccttctg gtggcgaaat gtctccatcg tcgtcgactc
      241 gagggtttcc cttttcgtct ttggaagatg atgttaaaaa gtttgattag agtttttaga
      301 tgatgttaga ttacttgaaa ctttgaaagg gtgtatttta gttctttcag tattttatgt
      361 tctttgattt atttgttatt ttatttattt tatggaagtc ttattccatg taattatttg
      421 gactgatata ttatttatga attaaatatt
//
LOCUS       XM_071886043            2049 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable E3
            ubiquitin-protein ligase XBOS32 (LOC139904113), mRNA.
ACCESSION   XM_071886043
VERSION     XM_071886043.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2049
                     /gene="LOC139904113"
                     /note="probable E3 ubiquitin-protein ligase XBOS32;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 Proteins"
                     /db_xref="GeneID:139904113"
     CDS             559..2046
                     /gene="LOC139904113"
                     /codon_start=1
                     /product="probable E3 ubiquitin-protein ligase XBOS32"
                     /protein_id="XP_071742144.1"
                     /db_xref="GeneID:139904113"
                     /translation="MRFFSLMGNSFGCSASGERLVSAARDGDVQEAKALLEYNPRLAR
                     YSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQYGHWEVVLT
                     LVLYKANIHKADYLNGGTALHLAALNGNSRCIRILLADYVPSVFNFCELVNQDSRIEE
                     FVSELDEGSLYETINRHADGGVTALHMAALNGHVDSLLLLIDLGASVNEVTVEDGTTI
                     DLIGAGSTPLHYAACGGNAQCCQILIGMGASIDAENAKGWTPLDVARSWHRDWLEEVL
                     IAQPQGETRTYSPYLCLPLMSVVKIARECGWSVDTLSNCADPCAVCLENKCAIAAEGC
                     FHEFCTRCALYLCSTSSASGAAQGPPGSIPCPLCRQGIVSFKKLPGTRPPLGIMSRTS
                     LPLSFFTCATFEDSDNISLDTTPLCKPDFQSPLRSLSCQRFPSMKLSSSLCMGASDTT
                     PSLSRSSVDGGGYARSSFRRSSLHSESRRSWLCSLNQSVETAGGC"
     misc_feature    616..1392
                     /gene="LOC139904113"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    order(712..714,724..729,736..744,748..753,763..765,
                     772..774,799..801,805..807,811..813,823..828,835..843,
                     847..852,862..864,871..873,898..900,907..909,913..915,
                     925..930,937..945,949..954,964..966)
                     /gene="LOC139904113"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    712..801
                     /gene="LOC139904113"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    805..900
                     /gene="LOC139904113"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1096..1191
                     /gene="LOC139904113"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1195..1320
                     /gene="LOC139904113"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1507..1680
                     /gene="LOC139904113"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(1513..1515,1522..1524,1558..1560,1564..1566,
                     1573..1575,1582..1584,1651..1653,1660..1662)
                     /gene="LOC139904113"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438111"
ORIGIN      
        1 cgccacatct tatttacaag cacgacactc aatttccgat tactgcaaat ttatctgatt
       61 acgtaatttt cgataaattc tatttgccga tctttctatt tccctaaaat tttcgaaacc
      121 ccctctataa attcacatta atcctccaaa agattccaac tttcccaaaa atttcatttg
      181 ggaattgaat cttttttcat aattaaggca gttccaaaga gggatttctt tcaaatcttt
      241 ctatataatt ggtattcttg aaatctttca tttttgggta aattgggaac tgggtatctg
      301 ttaattttgc ccattagtgt cagtaagtat tgaaagatgg atttggttca atatatagat
      361 ttaggggaaa tataaggtaa ggattctgat tgataccagt gtttgatcat ctcattgaca
      421 tttttaattt tttcaataac taaaaatggt caatttgtag gctttgtatc aaataatgca
      481 gaacaaagca agtttttttt tttttttttt ttttttttta ttgaatatta gtggtatgtt
      541 ctgttaaaga agaaaaaaat gaggtttttt agccttatgg ggaattcatt tggatgctca
      601 gcatctggtg aacgccttgt ttcagctgca agagatggtg atgttcaaga agctaaagct
      661 ttacttgaat acaaccctag attagctcga tattcaactt tcggtgttcg aaattcgccc
      721 cttcattact ctgcagctca aggccatcat gagatagttt cactgttgat tgaatctggt
      781 gttgacatta atcttaggaa ctatcgcggc cagactgcat tgatgcaagc gtgtcaatat
      841 ggtcactggg aggttgttct gactctggtt ctttacaaag caaatatcca caaagctgat
      901 tatctaaatg gaggtactgc attgcacttg gctgcactta atggaaattc gcgatgcatt
      961 aggatccttt tggctgatta tgtccctagt gttttcaatt tttgtgaact tgttaaccaa
     1021 gattcaagaa ttgaagagtt tgtttctgaa ttggatgaag ggtcgcttta tgaaacaatc
     1081 aatagacatg ccgatggagg tgtgactgct cttcatatgg ctgcattaaa tgggcatgtt
     1141 gatagtttac tgttacttat tgatttggga gcttctgtaa atgaagtcac cgtggaagat
     1201 ggcactacga ttgacttgat cggtgcggga agcacgcccc ttcattatgc tgcttgtggt
     1261 ggaaacgcac aatgttgtca aattctgata ggtatgggag ctagtataga tgccgaaaat
     1321 gcgaaaggat ggaccccttt agacgttgct cgttcgtggc atagagactg gcttgaggaa
     1381 gtattgattg cacaaccaca aggcgagaca cggacttatt cgccttactt gtgtcttcct
     1441 cttatgagtg tagtcaagat tgctagagag tgtggatgga gtgttgatac actttcaaat
     1501 tgtgcggatc cttgtgctgt ttgtttggaa aacaagtgtg ccatcgctgc agaaggttgc
     1561 tttcatgaat tctgcactcg atgtgcatta tatctttgtt ccacgagtag tgcatcaggt
     1621 gccgcccaag gaccgccagg ttcaatcccg tgtcctttat gccgccaagg aatagtctca
     1681 tttaagaagc ttccgggcac ccggccaccc cttgggatca tgtcacgaac tagcttaccg
     1741 ctatcatttt tcacttgcgc tacttttgaa gatagtgata acatttcact cgatacaact
     1801 cctttatgca agcccgattt ccaatcgcct cttagatctt tgagttgtca aaggtttcct
     1861 tcgatgaaac taagctcgag cctttgcatg ggagcttcag acaccacccc ttcgttgagc
     1921 cgatcgtcgg ttgacggtgg aggatatgcg agatcaagtt ttcgaaggtc gagtttgcat
     1981 tcagagagta gaagatcatg gttatgttca ctaaatcaat cagtagaaac tgctggtgga
     2041 tgttgaaag
//
LOCUS       XM_071886044             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904114), mRNA.
ACCESSION   XM_071886044
VERSION     XM_071886044.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139904114"
                     /note="uncharacterized LOC139904114; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904114"
     CDS             305..748
                     /gene="LOC139904114"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742145.1"
                     /db_xref="GeneID:139904114"
                     /translation="MDEFNSERSKSWNMYTDSPHSSPQIGGDDEGPWKNFGSSMNAIS
                     FGFVATAVLISMFLIMAIFEHLFRPNASFPLPQHDTDQLPHESRPMHKLVNPQPHVQT
                     AYVSDISVVMPGQQYPTYIAHSAPLPCSREGVHWPNHNQHTCVFP"
ORIGIN      
        1 tcaagttagg catcaagtat catttcattg cttacaacaa aatattgtct attgtcttgt
       61 gctttcttct catcaagcag catataatag aatcatagtt gagtgctcct gttgtgttct
      121 catttctcta caaacacaaa tcaaacattt atttctccaa atccatattc gataccatac
      181 gaattcgtta cagtatcaca tagcttaaca agtccacgag gtagcgatat caatctgtct
      241 ttggttatcc agataaggga atttttgttc gccaacaaaa aattagtaca gagcacatat
      301 atatatggac gagtttaatt cagaaagatc aaagtcgtgg aatatgtaca cggattcacc
      361 ccatagctcg cctcaaatag gaggtgacga cgaaggtcca tggaagaact ttgggtcgtc
      421 aatgaacgct atttcgtttg gtttcgttgc cactgcagtc ttaatatcaa tgttccttat
      481 aatggcgata ttcgaacatc ttttcagacc aaacgcttcg ttccctttgc cacaacatga
      541 cactgatcaa cttcctcatg aatcaaggcc aatgcacaag ctcgtaaatc cacaaccaca
      601 tgtacaaaca gcttatgtat cggatatttc ggtagtgatg ccaggtcagc agtatcctac
      661 atacattgca cattcagcac ctctaccttg ctcaagggaa ggtgtgcatt ggccgaatca
      721 taatcaacat acttgtgtgt ttccttaatg tctacgatag tataattttt attattcata
      781 tgtgaacctg atagt
//
LOCUS       XR_011778665            2356 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904115), ncRNA.
ACCESSION   XR_011778665
VERSION     XR_011778665.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2356
                     /gene="LOC139904115"
                     /note="uncharacterized LOC139904115; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904115"
     ncRNA           1..2356
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904115"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904115"
ORIGIN      
        1 cataaaaaac cctaaacaat acgctttctg catcgaatta acaagaaaat tgcatgatga
       61 aaaatcttca aagacaacct ttgcactgtc catcctttct gtatcgatta caatcaaaac
      121 ccctttctta atcaacaaaa gaattccaat taaattcatc gttctatgaa accttttgca
      181 tcgatcattt gcttaatggc gtgtaacggt ggcaccacca gattcataaa gagaaggttg
      241 cgatttttca gtataaattg gatattcaac gggtctgttg cacgatttat gaaagaccta
      301 tctcttaact ctgatttctt agaatcaagt taagttgccg gaagcaatta gggttacagg
      361 aattgaaatg ctttcccttg gctcatttgt cttcggactt ggcatcgact aagccgagtt
      421 catgtcccag cctaagccga gttcatgttc cggcctcgaa caggctgtca gcttcggtag
      481 ctaaatatgt gtgcttaacc acgattagta actctcctgt ttagtttaca tttttgtcaa
      541 cgattgtgtt tatactctta atagctccca ataagaatga agtttataga aagaatttta
      601 aaacaaatag gctgtcacga tgaacacgta ggagttgctt cgagtaatga gaaagaatga
      661 attcgtatct tggcgtggta acttacaagt tgcagccatg acgattcatt tactcttgat
      721 ttacatatat atgagcctca tttcttttgt tcgttgctaa atgattgagg aaaaatagtt
      781 tgtgctttgc gaagattaac aacaatgtcg ttgggttggt acttgcgtca accattgtgt
      841 tttgatcccc accactccaa ctaagaatga atgagattca tatagagaat gcttatataa
      901 aaaataggct atgatcataa acatgtaaca gttgggttaa tgaatgagaa aaaaatgatt
      961 ttgtatcttg gcgcgacaac ttacatgttg cagccatgac aattcatatt ctcttgcatc
     1021 attttataca catctgagcc tcatttttgt ttttgattac tttataagct ttgtgcagca
     1081 atagtgataa acgacaaaca attgcattag agtgttgtct ataccaatga acaacaaatg
     1141 gatgattttg catctgctac ggctggtggg tactcgattt ttaagtctag cagatgttgg
     1201 cgggtgacgg actacaggtt caacctctac aggttcaacc tcaaatttcc gacttctcgg
     1261 atagttaaag taagggtttt gaatctttta cggtctcctc tgttgaagaa aacttcaatt
     1321 ttactcagat gcttaatgag ataaatgctt caccaaatca agaagctaag acggaaatta
     1381 aaagtgatga aaagaatgtg ataacaaggt cattgttcaa ggatttttct gaacgttctt
     1441 ctgattcatc cttatggtcc attcattgtt agctacatgc ttcattaatt tcttttgact
     1501 gatttttaat tcaatacaat ttcgaaaacc aagtgataaa tatggaacaa aagaaatgtg
     1561 gcaatagtga tcctttgtct gctaattcgt tgcaagtgat gaaaagaatg cgataacaag
     1621 gtcattttag agttgttgag tgaatttgtg tcacttgggt acattggata agaatttggg
     1681 tcgataacta aatttggtgt cattttgggt taacatggtt aaaggttaaa catttagaga
     1741 taggtatgag tttgtagttt tattataccg ttacgtttac agtttgtttg attaaagagt
     1801 cgtcgtgcaa cgcacgggct cttaaaagct agtatatata taagagtttt gaattaatga
     1861 cttgttatta gaggcttaat tttagcatat tatgccatat gtaatttaca gctggccttt
     1921 cctcctaaac cgtcaatgta aactgccgat acccaatttt aatggataaa atacgggata
     1981 ctcaatcaga aaatcctccg ttgatttaaa tcacaaggat gcaatcgagg aaacacatct
     2041 agaagccact tcaataacca aaaaagatga tcgatccaag gatgaaatcg aactcaaatc
     2101 ggattgtctg caaaaataaa tccaacacgc tagaaaccat cgattacgca tgttgctgat
     2161 cttcgatttc aatttattaa aaagatacga attttatgtt tctaggttta aatcgaatcg
     2221 agggtttttc attattatat aaataaatta attgtcaata agttcatcaa tcgattgtaa
     2281 agttcttttt taatcgttta tagcattaag tttattttca gttcgatgat actatttttg
     2341 aaacagataa taattc
//
LOCUS       XR_011778666            1186 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904116), transcript variant X1, ncRNA.
ACCESSION   XR_011778666
VERSION     XR_011778666.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1186
                     /gene="LOC139904116"
                     /note="uncharacterized LOC139904116; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904116"
     ncRNA           1..1186
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904116"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904116"
ORIGIN      
        1 cttccaataa aagccctctc ccaaaaacta aactcccaat ttgtcgattg aaccgtacag
       61 taacattgaa gcttctttga attttttcac cggtttgccc taacttttca atattgaacc
      121 gcttcacaaa gtcgcataag gtgactcaaa ggatttgaca aatggacaaa aatcactgca
      181 actttcatgt tgcctctatt atgcaatctg cttatcaagc gtatgaggta acgctaagta
      241 gcatttgctc ttcttaaatt atataatgga ggaatattag agtttatttc tgccatttaa
      301 catgtttata ttgtcaagtt agatgttatt tttatccatg ttcttttcaa accaatgtgg
      361 tatgactaat tgattcctgt gtacaacata tagatgagcc ataagagaat atcattaggc
      421 atatgaagct attgacactt tcagtagctg tagcaaagta gcactatttt ttttattaag
      481 gtttgggtca tgttcaaatg tggtcgagtc tgagaattgg cgttagtgga atcctactac
      541 tgtggttttg gacaacaaga ttaaataata tgatacatta tgagtttgat ttttaatttc
      601 ttattcaatg accaactttt gtgattttga gatctggctt atgaagaaaa ggttcatata
      661 ccttcaaggt gacaatatct acttactgca tttttaattt ggttgatatt tacttttcgt
      721 ttttgttggt actaattttg acaaaagtaa aatatgttat tttagctcat catgtgatgt
      781 cgactgtatt ggatgtttgc agctccacat atatggtttt ttgacgctgt tgatattgaa
      841 gctgaatttg acagttgcag taggagaacc taacacaaaa aagatctcta gttaataatt
      901 tctcgttcaa gagggagagg gaggcaagac tggtagaggg atggcaaaga accaactata
      961 gctaccttat attagtttag tgttttatta gtgtttttta gtttagaatt catccattgt
     1021 aaattacatt tatgactttt ttgtacatac atatatatat atatatatat atatatatat
     1081 atatatatat atatatatat atatatatat atatatagtt tggttttgta gaaaatttaa
     1141 tttggtatat ttgatgcatt ttgtatttgg cgggtgttat ttgaaa
//
LOCUS       XR_011778667            1201 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904116), transcript variant X2, ncRNA.
ACCESSION   XR_011778667
VERSION     XR_011778667.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1201
                     /gene="LOC139904116"
                     /note="uncharacterized LOC139904116; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904116"
     ncRNA           1..1201
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904116"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904116"
ORIGIN      
        1 ccacgcatca aacttccaat aaaagccctc tcccaaaaac taaactccca atttgtcgat
       61 tgaaccgtac agtaacattg aagcttcttt gaattttttc accgcaggtt tgccctaact
      121 tttcaatatt gaaccgcttc acaaagtcgc ataaggtgac tcaaaggatt tgacaaatgg
      181 acaaaaatca ctgcaacttt catgttgcct ctattatgca atctgcttat caagcgtatg
      241 aggtaacgct aagtagcatt tgctcttctt aaattatata atggaggaat attagagttt
      301 atttctgcca tttaacatgt ttatattgtc aagttagatg ttatttttat ccatgttctt
      361 ttcaaaccaa tgtggtatga ctaattgatt cctgtgtaca acatatagat gagccataag
      421 agaatatcat taggcatatg aagctattga cactttcagt agctgtagca aagtagcact
      481 atttttttta ttaaggtttg ggtcatgttc aaatgtggtc gagtctgaga attggcgtta
      541 gtggaatcct actactgtgg ttttggacaa caagattaaa taatatgata cattatgagt
      601 ttgattttta atttcttatt caatgaccaa cttttgtgat tttgagatct ggcttatgaa
      661 gaaaaggttc atataccttc aaggtgacaa tatctactta ctgcattttt aatttggttg
      721 atatttactt ttcgtttttg ttggtactaa ttttgacaaa agtaaaatat gttattttag
      781 ctcatcatgt gatgtcgact gtattggatg tttgcagctc cacatatatg gttttttgac
      841 gctgttgata ttgaagctga atttgacagt tgcagtagga gaacctaaca caaaaaagat
      901 ctctagttaa taatttctcg ttcaagaggg agagggaggc aagactggta gagggatggc
      961 aaagaaccaa ctatagctac cttatattag tttagtgttt tattagtgtt ttttagttta
     1021 gaattcatcc attgtaaatt acatttatga cttttttgta catacatata tatatatata
     1081 tatatatata tatatatata tatatatata tatatatata tatatatata tagtttggtt
     1141 ttgtagaaaa tttaatttgg tatatttgat gcattttgta tttggcgggt gttatttgaa
     1201 a
//
LOCUS       XR_011778668            1239 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904116), transcript variant X3, ncRNA.
ACCESSION   XR_011778668
VERSION     XR_011778668.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1239
                     /gene="LOC139904116"
                     /note="uncharacterized LOC139904116; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904116"
     ncRNA           1..1239
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904116"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904116"
ORIGIN      
        1 cttccaataa aagccctctc ccaaaaacta aactcccaat ttgtcgattg aaccgtacag
       61 taacattgaa gcttctttga attttttcac cgttgtttta ttgaggtttg aaacaaatat
      121 caaattgatc atcttcttga agcaggtttg ccctaacttt tcaatattga accgcttcac
      181 aaagtcgcat aaggtgactc aaaggatttg acaaatggac aaaaatcact gcaactttca
      241 tgttgcctct attatgcaat ctgcttatca agcgtatgag gtaacgctaa gtagcatttg
      301 ctcttcttaa attatataat ggaggaatat tagagtttat ttctgccatt taacatgttt
      361 atattgtcaa gttagatgtt atttttatcc atgttctttt caaaccaatg tggtatgact
      421 aattgattcc tgtgtacaac atatagatga gccataagag aatatcatta ggcatatgaa
      481 gctattgaca ctttcagtag ctgtagcaaa gtagcactat tttttttatt aaggtttggg
      541 tcatgttcaa atgtggtcga gtctgagaat tggcgttagt ggaatcctac tactgtggtt
      601 ttggacaaca agattaaata atatgataca ttatgagttt gatttttaat ttcttattca
      661 atgaccaact tttgtgattt tgagatctgg cttatgaaga aaaggttcat ataccttcaa
      721 ggtgacaata tctacttact gcatttttaa tttggttgat atttactttt cgtttttgtt
      781 ggtactaatt ttgacaaaag taaaatatgt tattttagct catcatgtga tgtcgactgt
      841 attggatgtt tgcagctcca catatatggt tttttgacgc tgttgatatt gaagctgaat
      901 ttgacagttg cagtaggaga acctaacaca aaaaagatct ctagttaata atttctcgtt
      961 caagagggag agggaggcaa gactggtaga gggatggcaa agaaccaact atagctacct
     1021 tatattagtt tagtgtttta ttagtgtttt ttagtttaga attcatccat tgtaaattac
     1081 atttatgact tttttgtaca tacatatata tatatatata tatatatata tatatatata
     1141 tatatatata tatatatata tatatatata gtttggtttt gtagaaaatt taatttggta
     1201 tatttgatgc attttgtatt tggcgggtgt tatttgaaa
//
LOCUS       XR_011778669            1163 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904116), transcript variant X4, ncRNA.
ACCESSION   XR_011778669
VERSION     XR_011778669.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1163
                     /gene="LOC139904116"
                     /note="uncharacterized LOC139904116; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904116"
     ncRNA           1..1163
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904116"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904116"
ORIGIN      
        1 tgttcggttg cctccacgca tcaaacttcc aataaaagcc ctctcccaaa aactaaactc
       61 ccaatttgtc gattgaaccg tacagtaaca ttgaagcttc tttgaatttt ttcaccggtg
      121 actcaaagga tttgacaaat ggacaaaaat cactgcaact ttcatgttgc ctctattatg
      181 caatctgctt atcaagcgta tgaggtaacg ctaagtagca tttgctcttc ttaaattata
      241 taatggagga atattagagt ttatttctgc catttaacat gtttatattg tcaagttaga
      301 tgttattttt atccatgttc ttttcaaacc aatgtggtat gactaattga ttcctgtgta
      361 caacatatag atgagccata agagaatatc attaggcata tgaagctatt gacactttca
      421 gtagctgtag caaagtagca ctattttttt tattaaggtt tgggtcatgt tcaaatgtgg
      481 tcgagtctga gaattggcgt tagtggaatc ctactactgt ggttttggac aacaagatta
      541 aataatatga tacattatga gtttgatttt taatttctta ttcaatgacc aacttttgtg
      601 attttgagat ctggcttatg aagaaaaggt tcatatacct tcaaggtgac aatatctact
      661 tactgcattt ttaatttggt tgatatttac ttttcgtttt tgttggtact aattttgaca
      721 aaagtaaaat atgttatttt agctcatcat gtgatgtcga ctgtattgga tgtttgcagc
      781 tccacatata tggttttttg acgctgttga tattgaagct gaatttgaca gttgcagtag
      841 gagaacctaa cacaaaaaag atctctagtt aataatttct cgttcaagag ggagagggag
      901 gcaagactgg tagagggatg gcaaagaacc aactatagct accttatatt agtttagtgt
      961 tttattagtg ttttttagtt tagaattcat ccattgtaaa ttacatttat gacttttttg
     1021 tacatacata tatatatata tatatatata tatatatata tatatatata tatatatata
     1081 tatatatata tatagtttgg ttttgtagaa aatttaattt ggtatatttg atgcattttg
     1141 tatttggcgg gtgttatttg aaa
//
LOCUS       XR_011778670            1089 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904116), transcript variant X5, ncRNA.
ACCESSION   XR_011778670
VERSION     XR_011778670.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139904116"
                     /note="uncharacterized LOC139904116; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904116"
     ncRNA           1..1089
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904116"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139904116"
ORIGIN      
        1 cttccaataa aagccctctc ccaaaaacta aactcccaat ttgtcgattg aaccgtacag
       61 taacattgaa gcttctttga attttttcac cggtttgccc taacttttca atattgaacc
      121 gcttcacaaa gtcgcataag gtgactcaaa ggatttgaca aatggacaaa aatcactgca
      181 actttcatgt tgcctctatt atgcaatctg cttatcaagc gtatgaggta acgctaagta
      241 gcatttgctc ttcttaaatt atataatgga ggaatattag agtttatttc tgccatttaa
      301 catgtttata ttgtcaagtt agatgttatt tttatccatg ttcttttcaa accaatgtgg
      361 tatgactaat tgattcctgt gtacaacata tagatgagcc ataagagaat atcattaggc
      421 atatgaagct attgacactt tcagtagctg tagcaaagta gcactatttt ttttattaag
      481 gtttgggtca tgttcaaatg tggtcgagtc tgagaattgg cgttagtgga atcctactac
      541 tgtggttttg gacaacaaga ttaaataata tgatacatta tgagtttgat ttttaatttc
      601 ttattcaatg accaactttt gtgattttga gatctggctt atgaagaaaa ggttcatata
      661 ccttcaagct catcatgtga tgtcgactgt attggatgtt tgcagctcca catatatggt
      721 tttttgacgc tgttgatatt gaagctgaat ttgacagttg cagtaggaga acctaacaca
      781 aaaaagatct ctagttaata atttctcgtt caagagggag agggaggcaa gactggtaga
      841 gggatggcaa agaaccaact atagctacct tatattagtt tagtgtttta ttagtgtttt
      901 ttagtttaga attcatccat tgtaaattac atttatgact tttttgtaca tacatatata
      961 tatatatata tatatatata tatatatata tatatatata tatatatata tatatatata
     1021 gtttggtttt gtagaaaatt taatttggta tatttgatgc attttgtatt tggcgggtgt
     1081 tatttgaaa
//
LOCUS       XR_011778671            1020 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904116), transcript variant X6, ncRNA.
ACCESSION   XR_011778671
VERSION     XR_011778671.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1020
                     /gene="LOC139904116"
                     /note="uncharacterized LOC139904116; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904116"
     ncRNA           1..1020
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904116"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139904116"
ORIGIN      
        1 cttccaataa aagccctctc ccaaaaacta aactcccaat ttgtcgattg aaccgtacag
       61 taacattgaa gcttctttga attttttcac cggtttgccc taacttttca atattgaacc
      121 gcttcacaaa gtcgcataag gtgactcaaa ggatttgaca aatggacaaa aatcactgca
      181 actttcatgt tgcctctatt atgcaatctg cttatcaagc gtatgagatg agccataaga
      241 gaatatcatt aggcatatga agctattgac actttcagta gctgtagcaa agtagcacta
      301 ttttttttat taaggtttgg gtcatgttca aatgtggtcg agtctgagaa ttggcgttag
      361 tggaatccta ctactgtggt tttggacaac aagattaaat aatatgatac attatgagtt
      421 tgatttttaa tttcttattc aatgaccaac ttttgtgatt ttgagatctg gcttatgaag
      481 aaaaggttca tataccttca aggtgacaat atctacttac tgcattttta atttggttga
      541 tatttacttt tcgtttttgt tggtactaat tttgacaaaa gtaaaatatg ttattttagc
      601 tcatcatgtg atgtcgactg tattggatgt ttgcagctcc acatatatgg ttttttgacg
      661 ctgttgatat tgaagctgaa tttgacagtt gcagtaggag aacctaacac aaaaaagatc
      721 tctagttaat aatttctcgt tcaagaggga gagggaggca agactggtag agggatggca
      781 aagaaccaac tatagctacc ttatattagt ttagtgtttt attagtgttt tttagtttag
      841 aattcatcca ttgtaaatta catttatgac ttttttgtac atacatatat atatatatat
      901 atatatatat atatatatat atatatatat atatatatat atatatatat agtttggttt
      961 tgtagaaaat ttaatttggt atatttgatg cattttgtat ttggcgggtg ttatttgaaa
//
LOCUS       XM_071886046            1603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At4g30420-like (LOC139904117), transcript variant X1, mRNA.
ACCESSION   XM_071886046
VERSION     XM_071886046.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1603
                     /gene="LOC139904117"
                     /note="WAT1-related protein At4g30420-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139904117"
     CDS             1..1125
                     /gene="LOC139904117"
                     /codon_start=1
                     /product="WAT1-related protein At4g30420-like isoform X1"
                     /protein_id="XP_071742147.1"
                     /db_xref="GeneID:139904117"
                     /translation="MGKSEYYKPILVMLVMQFTYAGVSLSARASFLQGMNPRVFVVYR
                     QAFGTLFIAPISYFSRSKTQTMKSSMGLKSFSLIFIAALIGVTGNQMIQYEGIYLASA
                     SAASALSNLIPAITFVAASIVGFEPINIRSLRTIAKILGTIVCVTGASAMTLIKGPKL
                     LNTHLPLSNSLLYNSTDSDQIWLLGCLCLFVACCCWSFWLIIQVPLTRNYPDHLSLSA
                     WMCFIGTVQCAMVALFTDPHLESWKLSSLFQLGTCLYTGVVGSGISIFMQSWVIERRG
                     PVFSAMFNPLNTVIVTIIGSLFLQEQIYVGSVIGAFGIIIGLYVVLWGKAKDLEEMKE
                     EQQKKKMMISQNDDIRSIQVLVNKSDLEDQLLPKDEITAL"
     misc_feature    37..1044
                     /gene="LOC139904117"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
ORIGIN      
        1 atgggaaagt cagagtatta caagccaata cttgttatgt tggtgatgca gtttacatat
       61 gcgggagtct cattatcagc tagagcttct ttcttacaag gaatgaaccc aagagttttt
      121 gttgtatata gacaagcttt tggaactttg ttcattgccc ccataagtta cttttcaagg
      181 agtaaaacac aaacaatgaa atcttccatg ggattgaaga gtttttcgtt aatcttcatt
      241 gcagccttaa ttggagtaac aggcaaccaa atgattcaat atgaaggcat atacttggca
      301 tcagcttcag cagcaagtgc tttgtccaat cttatccctg ccatcacatt tgttgcagca
      361 tccattgttg gattcgaacc aatcaatatt cgaagcctga gaacaattgc gaaaatacta
      421 gggacgattg tgtgtgtcac aggtgcatct gcaatgacac tcattaaagg ccccaagctt
      481 ctaaatacac acctgccttt atcaaattct ctgttgtata actcaactga cagtgatcaa
      541 atttggctct tgggttgctt atgtctgttt gtcgcctgct gttgctggtc attttggcta
      601 atcatacagg taccactcac tagaaactac cctgatcatt tatcattatc tgcttggatg
      661 tgttttattg ggacagtgca atgcgcaatg gttgcattgt ttacggaccc acacttggaa
      721 tcttggaaac ttagctcgct atttcaactt ggaacttgtt tatacacggg tgttgttggt
      781 tctggaattt caatatttat gcaatcttgg gtcatcgaaa ggagaggtcc tgtattttca
      841 gcgatgttca atcctttaaa cacagtcatt gttaccatca ttggttctct gtttttacaa
      901 gaacagattt atgtaggaag tgtgataggt gcatttggaa tcataatcgg gttgtacgtt
      961 gtactatggg gtaaagctaa agacctagaa gaaatgaaag aagaacaaca gaagaagaag
     1021 atgatgatat cacaaaatga tgatatccgg agcattcaag ttttggttaa taaatctgat
     1081 ttggaagatc aacttttgcc taaagacgag atcactgccc tctgattaat cctggctgta
     1141 cttcgaacaa aacatcaata ttggagtact tagtgccagt tcactagcac tctagcagag
     1201 atcaatcaca gatcactacc acttccacag aaacatgtaa atatggtttt aattaacatg
     1261 taattccttt tttcttctct tatgtttagc atttggttca ctatgcaggt aatacaatct
     1321 tattattggc tctcacacaa ataatcttgt tctataagtc tctgcagtct atcactagta
     1381 tattcatata aaaaagacaa gctcgcacac tctacacgac cttttcacga atatttacac
     1441 atgttcacca ctggactcga acacataacc tcctggttag aggggttctt agataccgga
     1501 aggccaatag ccctttggtg atataatcga atttgattag gtcgatcata gatattgaat
     1561 aaacatatat tgattggccc atctagtaca tgttgatcat aaa
//
LOCUS       XM_071886047            1499 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At4g30420-like (LOC139904117), transcript variant X2, mRNA.
ACCESSION   XM_071886047
VERSION     XM_071886047.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1499
                     /gene="LOC139904117"
                     /note="WAT1-related protein At4g30420-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904117"
     CDS             92..1021
                     /gene="LOC139904117"
                     /codon_start=1
                     /product="WAT1-related protein At4g30420-like isoform X2"
                     /protein_id="XP_071742148.1"
                     /db_xref="GeneID:139904117"
                     /translation="MKSSMGLKSFSLIFIAALIGVTGNQMIQYEGIYLASASAASALS
                     NLIPAITFVAASIVGFEPINIRSLRTIAKILGTIVCVTGASAMTLIKGPKLLNTHLPL
                     SNSLLYNSTDSDQIWLLGCLCLFVACCCWSFWLIIQVPLTRNYPDHLSLSAWMCFIGT
                     VQCAMVALFTDPHLESWKLSSLFQLGTCLYTGVVGSGISIFMQSWVIERRGPVFSAMF
                     NPLNTVIVTIIGSLFLQEQIYVGSVIGAFGIIIGLYVVLWGKAKDLEEMKEEQQKKKM
                     MISQNDDIRSIQVLVNKSDLEDQLLPKDEITAL"
     misc_feature    <116..940
                     /gene="LOC139904117"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
ORIGIN      
        1 aagactttat tagataacaa tgacattaca caatctcgtc aaagcgtgta cgagaaatta
       61 ggatcttacg cacaagagta aaacacaaac aatgaaatct tccatgggat tgaagagttt
      121 ttcgttaatc ttcattgcag ccttaattgg agtaacaggc aaccaaatga ttcaatatga
      181 aggcatatac ttggcatcag cttcagcagc aagtgctttg tccaatctta tccctgccat
      241 cacatttgtt gcagcatcca ttgttggatt cgaaccaatc aatattcgaa gcctgagaac
      301 aattgcgaaa atactaggga cgattgtgtg tgtcacaggt gcatctgcaa tgacactcat
      361 taaaggcccc aagcttctaa atacacacct gcctttatca aattctctgt tgtataactc
      421 aactgacagt gatcaaattt ggctcttggg ttgcttatgt ctgtttgtcg cctgctgttg
      481 ctggtcattt tggctaatca tacaggtacc actcactaga aactaccctg atcatttatc
      541 attatctgct tggatgtgtt ttattgggac agtgcaatgc gcaatggttg cattgtttac
      601 ggacccacac ttggaatctt ggaaacttag ctcgctattt caacttggaa cttgtttata
      661 cacgggtgtt gttggttctg gaatttcaat atttatgcaa tcttgggtca tcgaaaggag
      721 aggtcctgta ttttcagcga tgttcaatcc tttaaacaca gtcattgtta ccatcattgg
      781 ttctctgttt ttacaagaac agatttatgt aggaagtgtg ataggtgcat ttggaatcat
      841 aatcgggttg tacgttgtac tatggggtaa agctaaagac ctagaagaaa tgaaagaaga
      901 acaacagaag aagaagatga tgatatcaca aaatgatgat atccggagca ttcaagtttt
      961 ggttaataaa tctgatttgg aagatcaact tttgcctaaa gacgagatca ctgccctctg
     1021 attaatcctg gctgtacttc gaacaaaaca tcaatattgg agtacttagt gccagttcac
     1081 tagcactcta gcagagatca atcacagatc actaccactt ccacagaaac atgtaaatat
     1141 ggttttaatt aacatgtaat tccttttttc ttctcttatg tttagcattt ggttcactat
     1201 gcaggtaata caatcttatt attggctctc acacaaataa tcttgttcta taagtctctg
     1261 cagtctatca ctagtatatt catataaaaa agacaagctc gcacactcta cacgaccttt
     1321 tcacgaatat ttacacatgt tcaccactgg actcgaacac ataacctcct ggttagaggg
     1381 gttcttagat accggaaggc caatagccct ttggtgatat aatcgaattt gattaggtcg
     1441 atcatagata ttgaataaac atatattgat tggcccatct agtacatgtt gatcataaa
//
LOCUS       XM_071886048            1445 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At4g30420-like (LOC139904119), transcript variant X1, mRNA.
ACCESSION   XM_071886048
VERSION     XM_071886048.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1445
                     /gene="LOC139904119"
                     /note="WAT1-related protein At4g30420-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139904119"
     CDS             37..1137
                     /gene="LOC139904119"
                     /codon_start=1
                     /product="WAT1-related protein At4g30420-like isoform X1"
                     /protein_id="XP_071742149.1"
                     /db_xref="GeneID:139904119"
                     /translation="MGRTENTKAVLVMLVLQTIYAGISLLVKAALLQGMSPRIFVVYR
                     QAFGTIFIVPIAYFSRSNTHRCKMGWKSFSLIFVAALIGLIGTQMMQYEGIFFATSSA
                     SSVLNNLIPAITFIGASILGLEPINIRSLRTLAKIAGTIVCVTGAVIMTLIKGPKLLN
                     AQLPSSSSLWSICSIGSDNQWLLGCLYLIGGCCCWSFWLLLQVPVSRMYPDHLSLSAW
                     MCFIGTVQSVTIGLFTDPYLEAWKIKSYLQLGSCLFAGIFGSAICIIFQSWIIERKGP
                     VFSAIFYPIGTVIVTIFASMFLQEQIYTGSIIGAFAIITGLYVVLWGKAEDVKELKEK
                     QEKTTVLQNEQIQTIQILDEDQSNLVDSLLLK"
     misc_feature    73..1074
                     /gene="LOC139904119"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
ORIGIN      
        1 aacaaataac aaatcaaaaa taataattaa ggttcaatgg ggagaacaga aaacacaaag
       61 gcagtattag ttatgttggt gttacaaaca atatatgcag gaatatcact attagttaaa
      121 gcggctcttt tgcaaggcat gagtcctagg atttttgttg tttatagaca agcttttgga
      181 actatattca ttgttcctat tgcttacttt tcaaggagta acacccatag atgtaaaatg
      241 ggatggaaga gcttttcgtt aatcttcgtt gcagctttga ttggactaat agggactcaa
      301 atgatgcaat acgaaggcat attctttgcc acatcttctg cttcaagtgt cttgaataat
      361 ctaattcctg ccatcacctt tattggagca tccatccttg ggctagaacc aataaacatt
      421 cgaagcttaa gaactttagc gaaaatagca ggaacgattg tgtgcgtgac aggcgctgtt
      481 attatgacac taataaaagg ccccaagctt ctaaatgcac agttgccttc atctagttcc
      541 ttgtggtcaa tatgttcaat tggaagtgat aatcaatggc ttttgggttg tttatatctc
      601 attggtggtt gttgttgctg gtcattttgg ttacttttac aggtaccagt tagtagaatg
      661 taccctgatc acttatcgtt atcagcttgg atgtgcttta tagggacggt gcaatctgtg
      721 actattggat tgtttacaga tccgtactta gaagcttgga agattaaatc atatttacaa
      781 ctaggatctt gtttatttgc gggtattttt ggctctgcaa tttgtataat tttccaatca
      841 tggatcattg aaaggaaagg tcccgtgttt tcagcaatat tctatccaat aggaacggtc
      901 atagttacca ttttcgcttc tatgttcctc caagaacaga tatacaccgg aagcattata
      961 ggtgcatttg cgatcataac tgggttgtat gttgtactat ggggtaaagc tgaagatgtc
     1021 aaagagctaa aagaaaaaca ggagaagaca acggtattac aaaatgaaca aatccagacc
     1081 atccaaattc tggatgaaga tcaatctaac ttggtagata gccttttgct taaataataa
     1141 atcaacagat tgtaatatga aatccaccag tattgattaa ggttcatcaa tacatgaata
     1201 agcgattagt actgaagcta ttcgacaaca aagaacttaa catgctaccc aaccagccta
     1261 acccgcctat tttacaccac tattaaaact caatgttaca tagggtcaca aaggacgact
     1321 accgttcata tttttgctta ccaaatcgga agataacaat agctctatac tgccattttc
     1381 atttctattt tctggtgagg atcgtagcct ataagtttaa aatcatcaga cacaaaagca
     1441 tctat
//
LOCUS       XM_071886049            1372 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At4g30420-like (LOC139904119), transcript variant X2, mRNA.
ACCESSION   XM_071886049
VERSION     XM_071886049.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1372
                     /gene="LOC139904119"
                     /note="WAT1-related protein At4g30420-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904119"
     CDS             165..1064
                     /gene="LOC139904119"
                     /codon_start=1
                     /product="WAT1-related protein At4g30420-like isoform X2"
                     /protein_id="XP_071742150.1"
                     /db_xref="GeneID:139904119"
                     /translation="MGWKSFSLIFVAALIGLIGTQMMQYEGIFFATSSASSVLNNLIP
                     AITFIGASILGLEPINIRSLRTLAKIAGTIVCVTGAVIMTLIKGPKLLNAQLPSSSSL
                     WSICSIGSDNQWLLGCLYLIGGCCCWSFWLLLQVPVSRMYPDHLSLSAWMCFIGTVQS
                     VTIGLFTDPYLEAWKIKSYLQLGSCLFAGIFGSAICIIFQSWIIERKGPVFSAIFYPI
                     GTVIVTIFASMFLQEQIYTGSIIGAFAIITGLYVVLWGKAEDVKELKEKQEKTTVLQN
                     EQIQTIQILDEDQSNLVDSLLLK"
     misc_feature    <177..1001
                     /gene="LOC139904119"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
ORIGIN      
        1 ttgcaaggca tgagtcctag gatttttgtt gtttatagac aagcttttgg aactatattc
       61 attgttccta ttgcttactt ttcaaggttc aataacgact tcgcggggat tcggttgtat
      121 gacttttgtc aatctattgt aggagtaaca cccatagatg taaaatggga tggaagagct
      181 tttcgttaat cttcgttgca gctttgattg gactaatagg gactcaaatg atgcaatacg
      241 aaggcatatt ctttgccaca tcttctgctt caagtgtctt gaataatcta attcctgcca
      301 tcacctttat tggagcatcc atccttgggc tagaaccaat aaacattcga agcttaagaa
      361 ctttagcgaa aatagcagga acgattgtgt gcgtgacagg cgctgttatt atgacactaa
      421 taaaaggccc caagcttcta aatgcacagt tgccttcatc tagttccttg tggtcaatat
      481 gttcaattgg aagtgataat caatggcttt tgggttgttt atatctcatt ggtggttgtt
      541 gttgctggtc attttggtta cttttacagg taccagttag tagaatgtac cctgatcact
      601 tatcgttatc agcttggatg tgctttatag ggacggtgca atctgtgact attggattgt
      661 ttacagatcc gtacttagaa gcttggaaga ttaaatcata tttacaacta ggatcttgtt
      721 tatttgcggg tatttttggc tctgcaattt gtataatttt ccaatcatgg atcattgaaa
      781 ggaaaggtcc cgtgttttca gcaatattct atccaatagg aacggtcata gttaccattt
      841 tcgcttctat gttcctccaa gaacagatat acaccggaag cattataggt gcatttgcga
      901 tcataactgg gttgtatgtt gtactatggg gtaaagctga agatgtcaaa gagctaaaag
      961 aaaaacagga gaagacaacg gtattacaaa atgaacaaat ccagaccatc caaattctgg
     1021 atgaagatca atctaacttg gtagatagcc ttttgcttaa ataataaatc aacagattgt
     1081 aatatgaaat ccaccagtat tgattaaggt tcatcaatac atgaataagc gattagtact
     1141 gaagctattc gacaacaaag aacttaacat gctacccaac cagcctaacc cgcctatttt
     1201 acaccactat taaaactcaa tgttacatag ggtcacaaag gacgactacc gttcatattt
     1261 ttgcttacca aatcggaaga taacaatagc tctatactgc cattttcatt tctattttct
     1321 ggtgaggatc gtagcctata agtttaaaat catcagacac aaaagcatct at
//
LOCUS       XM_071886050            1920 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bifunctional dihydrofolate
            reductase-thymidylate synthase 1-like (LOC139904121), mRNA.
ACCESSION   XM_071886050
VERSION     XM_071886050.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1920
                     /gene="LOC139904121"
                     /note="bifunctional dihydrofolate reductase-thymidylate
                     synthase 1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139904121"
     CDS             150..1688
                     /gene="LOC139904121"
                     /codon_start=1
                     /product="bifunctional dihydrofolate reductase-thymidylate
                     synthase 1-like"
                     /protein_id="XP_071742151.1"
                     /db_xref="GeneID:139904121"
                     /translation="MASETFVGVCNDTINIPTDLQRTYQVVVAATQTMGIGKNGKLPW
                     NLPSDLKFFKDVTLTTFDPTKMNAVVMGRKTWESIPLSRRPLTGRLNVVLTHSTSFEF
                     TTTDTVIMCGSFDSALEVLASSPYCLSIERVFVIGGGEILRESLNGPRCDAIHITEIE
                     ADIDCDTFIPTIDTLKFQLWYSSFPLVENGIRYCLTTYVRSRISAVDSPIKPKNLYSF
                     LPKTIFEKHEEYLYLKLVDDILSHGALKGDRTGTGTLSKFGCQMRFNLRRSFPLLTTK
                     KVFWRGVVEELLWFISGSTSAKVLQAKGIHIWDGNASRNYLDSIGLVDREEGDLGPVY
                     GFQWRHFGARYTNMHADYSGQGFDQLLDVIDKIKNNPDDRRIILSAWNPSDLDQMALP
                     PCHMFAQFYVNQGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFVHV
                     LGDAHVYSTHVRPLQDQLQKLPKPFPILKINSEKKDIDAFVSDDFKLIGYDPHQKIEM
                     KMAV"
     misc_feature    210..1685
                     /gene="LOC139904121"
                     /note="bifunctional dihydrofolate reductase-thymidylate
                     synthase; Provisional; Region: PTZ00164"
                     /db_xref="CDD:240299"
ORIGIN      
        1 tccaaaatta aacccaattc atcgcaaacc ctaatttatg ttctaaaatt cgtcaatcga
       61 caatagtctt cttgacagtc ttctgtacct cgttcgtctc ctgaagaaag aaatctactt
      121 tttctgaagg ctacattcat aatctgtcaa tggctagtga aacttttgtg ggcgtgtgca
      181 atgacactat caacattcct actgatcttc agaggactta tcaagttgtc gttgctgcta
      241 cacaaactat gggtattggc aagaacggga agttgccttg gaatttgcct tcggacctca
      301 agttttttaa ggacgtaacc ttgactacat ttgatccaac aaagatgaat gctgttgtaa
      361 tgggaagaaa aacatgggaa agcataccac tatcgcgtcg acctctgact ggtcgactca
      421 atgttgtttt aacacattcc acgagttttg aatttacaac tactgacact gttataatgt
      481 gtgggagttt cgactctgct ttggaagtat tagcatcatc tccctattgt ttatccattg
      541 aacgggtctt tgtaattggt ggtggcgaga tcctaaggga gtcgctcaat ggtcctcgct
      601 gtgatgctat ccatattact gaaatcgaag cagacattga ttgtgatact ttcatcccga
      661 ctatagatac tttgaaattt cagctatggt actcatcgtt cccattggta gagaacggaa
      721 ttcggtattg tttgactact tatgtccgtt cgaggatatc tgcagttgat tcccctatta
      781 aacctaaaaa cctgtactct ttcttgccca aaacgatatt tgagaagcat gaggagtacc
      841 tttatttaaa gctggtggac gacattcttt ctcatggtgc gttgaagggt gaccgcaccg
      901 ggactggtac cttgtcaaaa tttggttgcc agatgcggtt caatcttcgg aggtcttttc
      961 cgcttcttac aaccaagaaa gtgttttggc gtggagttgt agaagaactt ttgtggttca
     1021 tcagcggatc aacaagtgct aaggtcttac aagctaaggg cattcatata tgggatggta
     1081 atgcgtcacg aaactaccta gacagtattg gcttggtgga tagagaagaa ggtgacttgg
     1141 gaccggtata cgggtttcag tggagacact ttggtgcaag gtacactaac atgcatgctg
     1201 actactctgg ccagggattt gatcaattgc tagatgttat tgacaagata aaaaacaatc
     1261 cagatgaccg tcggataatt ctttcagcat ggaacccatc agatctcgat cagatggcac
     1321 ttccaccttg tcatatgttt gcacagtttt atgtaaatca aggggagtta tcttgccaaa
     1381 tgtatcagcg atctgcagat atgggtcttg gtgttccatt taacatagca tcgtatgctt
     1441 tattgacatg catgatcgcc catgtttgtg atcttgttcc tggtgatttt gtccatgttc
     1501 ttggtgatgc tcatgtatat agcactcatg tcagacctct gcaggatcag cttcagaagc
     1561 tgcctaaacc ttttccaata ttgaagatca attccgagaa gaaggatata gatgcttttg
     1621 tgtctgatga ttttaaactt ataggctacg atcctcacca gaaaatagaa atgaaaatgg
     1681 cagtatagag ctattgttat cttccgattt ggtaagcaaa aatatgaacg gtagtcgtcc
     1741 tttgtgaccc tatgtaacat tgagttttaa tagtggtgta aaataggcgg gttaggctgg
     1801 ttgggtagca tgttaagttc tttgttgtcg aatagcttca gtactaatcg cttattcatg
     1861 tattgatgaa ccttaatcaa tactggtgga tttcatatta caatctgttg atttattatt
//
LOCUS       XM_071886051             926 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904122), mRNA.
ACCESSION   XM_071886051
VERSION     XM_071886051.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..926
                     /gene="LOC139904122"
                     /note="uncharacterized LOC139904122; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139904122"
     CDS             8..772
                     /gene="LOC139904122"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742152.1"
                     /db_xref="GeneID:139904122"
                     /translation="MVVLEPVTCSDDQSKKSTDVAPETDQSDAAEYASDGFETASETE
                     VSDDQSVLNNNDAIEHQHHSEQVTINERQLEQKVIDQMNEAKVEGNKFFGEGLYEEAL
                     SKYDYAIQLAPETSSSAEIRSICHNNRATCFFKLGKYEDSIKECTKALELNSTYMKPL
                     LRKAEAHEKLENYDEAIADLKKILELDPSNHQARRRIIRLEPLAIEKREKMKEEMLGK
                     LKDMGNTILGKFGMSVDNFKAVKDPNTGSYSISFQQ"
     misc_feature    <272..721
                     /gene="LOC139904122"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; Region: NlpI; COG4785"
                     /db_xref="CDD:443815"
     misc_feature    order(275..280,284..286,377..379,386..391,398..403,
                     407..412,479..481,488..493,500..505,512..514)
                     /gene="LOC139904122"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    371..463
                     /gene="LOC139904122"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    476..562
                     /gene="LOC139904122"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
ORIGIN      
        1 gttgaaaatg gtggtacttg aaccggtgac ttgttccgat gatcaatcaa aaaagtcaac
       61 cgatgttgcg cccgaaacag atcaatccga cgccgccgaa tacgcatctg atggtttcga
      121 gaccgctagc gagactgagg tttccgatga tcaaagtgtt ttaaataaca atgatgcaat
      181 tgaacatcaa caccattcgg aacaagtcac aattaacgaa cgacaacttg agcagaaagt
      241 tatagatcaa atgaatgaag caaaagttga aggcaataag ttttttgggg aaggtttgta
      301 tgaggaagcg ttatcgaagt atgattatgc tatacaactt gcacctgaga catcctcatc
      361 tgcagaaatc aggtcaatat gccataataa tcgcgctaca tgttttttta agctgggaaa
      421 gtatgaagat tccatcaaag agtgcaccaa agcattggaa ctaaattcta cttacatgaa
      481 acctcttctt aggaaagctg aggcccacga aaagcttgaa aattatgatg aagctattgc
      541 tgatctgaaa aaaatcttgg aattggatcc ttcaaatcac caagctagga gaagaattat
      601 tcgtttagag ccgttggcta tagaaaagcg tgaaaagatg aaggaagaga tgttaggcaa
      661 gttgaaagat atggggaata cgattctagg gaaatttggg atgagtgttg acaactttaa
      721 agcggtgaaa gatccaaata cgggctcgta ttccatctca tttcagcagt aatgattgaa
      781 tgttgctgtg caaaatatat ttatacctat ataccattgc ctatcttttt ttggtgctag
      841 aatgtaaact gcatcagctt gatcaccact gtatgaacat ttgcatgcgg atttggtcta
      901 tttctatatt ttgtttttct acaagc
//
LOCUS       XM_071886053             876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides stress-response A/B barrel
            domain-containing protein UP3-like (LOC139904123), mRNA.
ACCESSION   XM_071886053
VERSION     XM_071886053.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..876
                     /gene="LOC139904123"
                     /note="stress-response A/B barrel domain-containing
                     protein UP3-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139904123"
     CDS             15..794
                     /gene="LOC139904123"
                     /codon_start=1
                     /product="stress-response A/B barrel domain-containing
                     protein UP3-like"
                     /protein_id="XP_071742154.1"
                     /db_xref="GeneID:139904123"
                     /translation="MLSAPARTRLLPSISLLPSQPIIFRRLNRLIHRRNHQTPIRMSA
                     QQQIVEHVVLFKVKPDVDSSKVDAMVNGLNGLTSLDLTVHLSAGHLLRSRSSSLTFTH
                     MLHSRYRSKDDLREYAAHPEHVRVVTENIKPIIDDIMAVDWISNDASVPPKPGSAMRV
                     TFLKLKENLGENEKTRVLEVIGGIKNQFKSIEELSVGENFSHDRAKGYTIASIAVLPG
                     PAELEALDSNTELVKLEKEKVKDLLDSVLVVDYVNPPLQMA"
     misc_feature    159..449
                     /gene="LOC139904123"
                     /note="Stress responsive A/B Barrel Domain; Region: Dabb;
                     pfam07876"
                     /db_xref="CDD:400293"
     misc_feature    489..773
                     /gene="LOC139904123"
                     /note="Stress responsive A/B Barrel Domain; Region: Dabb;
                     pfam07876"
                     /db_xref="CDD:400293"
ORIGIN      
        1 tgttgtccac aaaaatgcta agtgctccag cacgcacacg attacttcca tcaatttctc
       61 tcttaccttc ccaacctatc atcttccgtc gcctcaaccg tctcatccac cgtcgcaacc
      121 atcaaacgcc gatcagaatg tctgctcaac aacaaatcgt ggaacacgta gtgctcttca
      181 aagtgaaacc tgatgttgac tctagcaaag tcgatgcaat ggtcaacgga ctcaacggat
      241 tgacctcact cgatctcact gtccacctct ccgccggaca tctcctccgg tcacggtcat
      301 cgtcgttgac cttcactcac atgcttcaca gtcgttacag gtcaaaggac gatctccggg
      361 agtacgccgc tcatccggag cacgtgcgtg tcgtgacgga gaatataaaa ccgattattg
      421 acgatattat ggctgttgat tggatatcta atgatgccag tgtaccgcct aagccagggt
      481 cggcgatgag agtaacattt ttgaaattga aggagaattt gggggaaaat gagaaaacta
      541 gggttttgga agtgattgga ggaattaaaa atcagtttaa atcaattgaa gagttaagtg
      601 ttggtgagaa tttttctcat gatagagcca aggggtatac gattgcttca attgctgtgt
      661 tgccggggcc tgctgagctg gaggcattgg attcaaatac tgagctggta aagttggaaa
      721 aggagaaagt gaaggattta ctagacagtg ttttggttgt tgattatgtg aatccacctc
      781 tacaaatggc ttaacttcta attaatgctt gcttggtcca ggttcttcat acatttaatt
      841 tggctagttt gttgtttaat ccttggcagt agcata
//
LOCUS       XM_071886054            2078 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904124), transcript variant X1, mRNA.
ACCESSION   XM_071886054
VERSION     XM_071886054.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2078
                     /gene="LOC139904124"
                     /note="uncharacterized LOC139904124; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139904124"
     CDS             320..1870
                     /gene="LOC139904124"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742155.1"
                     /db_xref="GeneID:139904124"
                     /translation="MRRAFVKSSGLIRSAFRHHGVKYVTGVEKRLLLSNINNGTLDNF
                     AYDTCKCGRPFYTFSRAISSSASEVSSKGENRAGPLVEYERRIEAGDLDDGDNSQIGT
                     LKEIQRLYDELVKSADACRLDRYSDSGKAGRSRWLWSRLIPQSTVSPVKGLYLYGGVG
                     TGKTMLMDLFYDQLPCTWRKKRIHFHDFMLTVHSRLQKHRGVADPLEVVAGEISDESI
                     LLCLDEFMVNDVADALILNRLFSHLFSNGAILVATSNRAPDNLYERGLQRDLFLPFIA
                     TLKERCVVHEIGSSIDYRKRTSAEEGFYFVNNDSSDFLKQKFKELVGEHTAQPQVAEV
                     VMGRKLQVPLGGNGCAYFPFEELCDKPLGAADYFGLCKNYHTLALDDVPIFGLHNRTA
                     AYRFVTLVDVMYENKARLMCTAEGTPFQLFERIVTIADAQSRAPRTSSRSRKNDDYDL
                     CVDNELGFAKDRTISRLTEMNSSEYLEQHAEMVAEKQLQTQTQSDEDNHDHVLMDQVN
                     DFALKSPK"
     misc_feature    551..1759
                     /gene="LOC139904124"
                     /note="Cell division protein ZapE (Z ring-associated
                     ATPase), AFG1 superfamily [Cell cycle control, cell
                     division, chromosome partitioning]; Region: ZapE; COG1485"
                     /db_xref="CDD:441094"
ORIGIN      
        1 tccaacaaag taggttttca aaggccttcc ataactttag ggttccttat atatattttc
       61 tcatcattca gattaaattg catctgaacc ttatctattt atccaatttt ggataaatca
      121 tacaatcact gatattgctt ttatcttcta aagacagttt cttgcagact tcaatcgaat
      181 tatattatct gggttgcagt ttttgaaatt tgtatacttt tcttgatccg aattcaggat
      241 tattgtgatt ctctccccga ggcttacttt cattgctttg gtgcaatctg taaatcaaat
      301 ttaaagaact ggattgagga tgaggagggc ttttgtaaaa tcttctgggc taatacgctc
      361 ggcttttaga catcacggtg ttaaatatgt gaccggggta gaaaaaagat tgttgttatc
      421 aaatataaat aatgggactt tagataattt tgcttatgat acttgtaaat gcggacgacc
      481 tttctatacg ttttctagag ctatatcttc cagtgcttct gaagtgagct ctaaagggga
      541 gaacagagca gggcctcttg tggaatatga acgtagaatc gaagctggtg atcttgacga
      601 cggtgataat tcgcagatag gcacattaaa agaaattcaa cgactttatg atgagcttgt
      661 taaatcagct gatgcatgtc gtttggatcg ttattctgat tctgggaaag ctgggaggag
      721 taggtggtta tggtctcgtc tcataccaca gtctacagtc tcaccagtga aaggactcta
      781 tctttacgga ggagttggta ccggaaaaac aatgctgatg gatttatttt atgaccaact
      841 gccttgcact tggaggaaaa aaaggataca ttttcatgac ttcatgttga ctgtccatag
      901 tcgcttacaa aagcatagag gtgtagctga tccccttgaa gttgttgcag gagagatatc
      961 cgatgaatcc attttattat gcctagatga gttcatggtt aatgatgtag ctgatgcatt
     1021 gatcctaaac cgattattta gtcatctttt tagcaatggt gctatacttg ttgctacgtc
     1081 aaaccgtgcc ccagacaatc tctatgaacg tgggttgcaa agagatcttt ttttaccatt
     1141 tattgccaca ctaaaggaaa gatgtgtagt acatgaaatc ggttcatcca tagattacag
     1201 aaaaaggacc tcggctgaag aaggtttcta cttcgtaaat aatgattcgt ctgacttttt
     1261 aaagcaaaaa tttaaagagt tagttgggga acatacagct cagccccagg tagcagaagt
     1321 tgttatgggc agaaaactac aggtaccact tggtgggaac ggatgtgcgt actttccttt
     1381 tgaggaacta tgtgacaaac ctctaggtgc tgctgactat tttggcttat gtaagaatta
     1441 tcatacattg gcgttagatg atgtgccaat atttgggctc cacaacagaa ctgcagccta
     1501 tcgatttgtc actttagttg atgtgatgta cgagaataag gcgaggttga tgtgtactgc
     1561 cgaagggact cctttccaac tatttgaaag gattgtgacc atcgctgatg ctcaaagtag
     1621 ggctcctaga acttcatcca ggtcaaggaa aaatgacgat tatgaccttt gtgtcgacaa
     1681 tgagctagga tttgctaaag accgcactat tagcaggttg acagagatga acagcagcga
     1741 gtatctcgag cagcatgcag aaatggtagc agagaagcaa cttcaaaccc aaacccaaag
     1801 tgatgaagac aaccatgatc atgtgttgat ggatcaggta aatgattttg cattgaaatc
     1861 gccgaagtga ccgcctacat tttatggaaa aataatgatg gaaggcaagt atgtataatt
     1921 tttaagtgca gagaaggata tatgcatcaa catcttgatg taataaaact gcattgtaat
     1981 tgtaattgta actgtaacca catgtttaaa taatttaacg tttatgttgt acgaatgttg
     2041 ttcaaaactg cactgtaatg cttaattaac ttggttgc
//
LOCUS       XM_071886055            2066 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904124), transcript variant X2, mRNA.
ACCESSION   XM_071886055
VERSION     XM_071886055.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2066
                     /gene="LOC139904124"
                     /note="uncharacterized LOC139904124; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139904124"
     CDS             320..1858
                     /gene="LOC139904124"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742156.1"
                     /db_xref="GeneID:139904124"
                     /translation="MRRAFVKSSGLIRSAFRHHGVKYVTGVEKRLLLSNINNGTLDNF
                     AYDTCKCGRPFYTFSRAISSSASEVSSKGENRAGPLVEYERRIEAGDLDDGDNSQIGT
                     LKEIQRLYDELVKSADACRLDRYSDSGKAGRSRWLWSRLIPQSTVSPVKGLYLYGGVG
                     TGKTMLMDLFYDQLPCTWRKKRIHFHDFMLTVHSRLQKHRGVADPLEVVAGEISDESI
                     LLCLDEFMVNDVADALILNRLFSHLFSNGAILVATSNRAPDNLYERGLQRDLFLPFIA
                     TLKERCVVHEIGSSIDYRKRTSAEEGFYFVNNDSSDFLKQKFKELVGEHTAQPQVAEV
                     VMGRKLQVPLGGNGCAYFPFEELCDKPLGAADYFGLCKNYHTLALDDVPIFGLHNRTA
                     AYRFVTLVDVMYENKARLMCTAEGTPFQLFERIVTIADAQSRAPRTSSRSRKNDDYDL
                     CVDNELGFAKDRTISRLTEMNSSEYLEQHAEMVAEKQLQTQTQSDEDNHDHVVNDFAL
                     KSPK"
     misc_feature    551..1759
                     /gene="LOC139904124"
                     /note="Cell division protein ZapE (Z ring-associated
                     ATPase), AFG1 superfamily [Cell cycle control, cell
                     division, chromosome partitioning]; Region: ZapE; COG1485"
                     /db_xref="CDD:441094"
ORIGIN      
        1 tccaacaaag taggttttca aaggccttcc ataactttag ggttccttat atatattttc
       61 tcatcattca gattaaattg catctgaacc ttatctattt atccaatttt ggataaatca
      121 tacaatcact gatattgctt ttatcttcta aagacagttt cttgcagact tcaatcgaat
      181 tatattatct gggttgcagt ttttgaaatt tgtatacttt tcttgatccg aattcaggat
      241 tattgtgatt ctctccccga ggcttacttt cattgctttg gtgcaatctg taaatcaaat
      301 ttaaagaact ggattgagga tgaggagggc ttttgtaaaa tcttctgggc taatacgctc
      361 ggcttttaga catcacggtg ttaaatatgt gaccggggta gaaaaaagat tgttgttatc
      421 aaatataaat aatgggactt tagataattt tgcttatgat acttgtaaat gcggacgacc
      481 tttctatacg ttttctagag ctatatcttc cagtgcttct gaagtgagct ctaaagggga
      541 gaacagagca gggcctcttg tggaatatga acgtagaatc gaagctggtg atcttgacga
      601 cggtgataat tcgcagatag gcacattaaa agaaattcaa cgactttatg atgagcttgt
      661 taaatcagct gatgcatgtc gtttggatcg ttattctgat tctgggaaag ctgggaggag
      721 taggtggtta tggtctcgtc tcataccaca gtctacagtc tcaccagtga aaggactcta
      781 tctttacgga ggagttggta ccggaaaaac aatgctgatg gatttatttt atgaccaact
      841 gccttgcact tggaggaaaa aaaggataca ttttcatgac ttcatgttga ctgtccatag
      901 tcgcttacaa aagcatagag gtgtagctga tccccttgaa gttgttgcag gagagatatc
      961 cgatgaatcc attttattat gcctagatga gttcatggtt aatgatgtag ctgatgcatt
     1021 gatcctaaac cgattattta gtcatctttt tagcaatggt gctatacttg ttgctacgtc
     1081 aaaccgtgcc ccagacaatc tctatgaacg tgggttgcaa agagatcttt ttttaccatt
     1141 tattgccaca ctaaaggaaa gatgtgtagt acatgaaatc ggttcatcca tagattacag
     1201 aaaaaggacc tcggctgaag aaggtttcta cttcgtaaat aatgattcgt ctgacttttt
     1261 aaagcaaaaa tttaaagagt tagttgggga acatacagct cagccccagg tagcagaagt
     1321 tgttatgggc agaaaactac aggtaccact tggtgggaac ggatgtgcgt actttccttt
     1381 tgaggaacta tgtgacaaac ctctaggtgc tgctgactat tttggcttat gtaagaatta
     1441 tcatacattg gcgttagatg atgtgccaat atttgggctc cacaacagaa ctgcagccta
     1501 tcgatttgtc actttagttg atgtgatgta cgagaataag gcgaggttga tgtgtactgc
     1561 cgaagggact cctttccaac tatttgaaag gattgtgacc atcgctgatg ctcaaagtag
     1621 ggctcctaga acttcatcca ggtcaaggaa aaatgacgat tatgaccttt gtgtcgacaa
     1681 tgagctagga tttgctaaag accgcactat tagcaggttg acagagatga acagcagcga
     1741 gtatctcgag cagcatgcag aaatggtagc agagaagcaa cttcaaaccc aaacccaaag
     1801 tgatgaagac aaccatgatc atgtggtaaa tgattttgca ttgaaatcgc cgaagtgacc
     1861 gcctacattt tatggaaaaa taatgatgga aggcaagtat gtataatttt taagtgcaga
     1921 gaaggatata tgcatcaaca tcttgatgta ataaaactgc attgtaattg taattgtaac
     1981 tgtaaccaca tgtttaaata atttaacgtt tatgttgtac gaatgttgtt caaaactgca
     2041 ctgtaatgct taattaactt ggttgc
//
LOCUS       XM_071886056            2086 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904124), transcript variant X3, mRNA.
ACCESSION   XM_071886056
VERSION     XM_071886056.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2086
                     /gene="LOC139904124"
                     /note="uncharacterized LOC139904124; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139904124"
     CDS             320..1837
                     /gene="LOC139904124"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742157.1"
                     /db_xref="GeneID:139904124"
                     /translation="MRRAFVKSSGLIRSAFRHHGVKYVTGVEKRLLLSNINNGTLDNF
                     AYDTCKCGRPFYTFSRAISSSASEVSSKGENRAGPLVEYERRIEAGDLDDGDNSQIGT
                     LKEIQRLYDELVKSADACRLDRYSDSGKAGRSRWLWSRLIPQSTVSPVKGLYLYGGVG
                     TGKTMLMDLFYDQLPCTWRKKRIHFHDFMLTVHSRLQKHRGVADPLEVVAGEISDESI
                     LLCLDEFMVNDVADALILNRLFSHLFSNGAILVATSNRAPDNLYERGLQRDLFLPFIA
                     TLKERCVVHEIGSSIDYRKRTSAEEGFYFVNNDSSDFLKQKFKELVGEHTAQPQVAEV
                     VMGRKLQVPLGGNGCAYFPFEELCDKPLGAADYFGLCKNYHTLALDDVPIFGLHNRTA
                     AYRFVTLVDVMYENKARLMCTAEGTPFQLFERIVTIADAQSRAPRTSSRSRKNDDYDL
                     CVDNELGFAKDRTISRLTEMNSSEYLEQHAEMVAEKQLQTQTQSDEDNHDHVVQA"
     misc_feature    551..1759
                     /gene="LOC139904124"
                     /note="Cell division protein ZapE (Z ring-associated
                     ATPase), AFG1 superfamily [Cell cycle control, cell
                     division, chromosome partitioning]; Region: ZapE; COG1485"
                     /db_xref="CDD:441094"
ORIGIN      
        1 tccaacaaag taggttttca aaggccttcc ataactttag ggttccttat atatattttc
       61 tcatcattca gattaaattg catctgaacc ttatctattt atccaatttt ggataaatca
      121 tacaatcact gatattgctt ttatcttcta aagacagttt cttgcagact tcaatcgaat
      181 tatattatct gggttgcagt ttttgaaatt tgtatacttt tcttgatccg aattcaggat
      241 tattgtgatt ctctccccga ggcttacttt cattgctttg gtgcaatctg taaatcaaat
      301 ttaaagaact ggattgagga tgaggagggc ttttgtaaaa tcttctgggc taatacgctc
      361 ggcttttaga catcacggtg ttaaatatgt gaccggggta gaaaaaagat tgttgttatc
      421 aaatataaat aatgggactt tagataattt tgcttatgat acttgtaaat gcggacgacc
      481 tttctatacg ttttctagag ctatatcttc cagtgcttct gaagtgagct ctaaagggga
      541 gaacagagca gggcctcttg tggaatatga acgtagaatc gaagctggtg atcttgacga
      601 cggtgataat tcgcagatag gcacattaaa agaaattcaa cgactttatg atgagcttgt
      661 taaatcagct gatgcatgtc gtttggatcg ttattctgat tctgggaaag ctgggaggag
      721 taggtggtta tggtctcgtc tcataccaca gtctacagtc tcaccagtga aaggactcta
      781 tctttacgga ggagttggta ccggaaaaac aatgctgatg gatttatttt atgaccaact
      841 gccttgcact tggaggaaaa aaaggataca ttttcatgac ttcatgttga ctgtccatag
      901 tcgcttacaa aagcatagag gtgtagctga tccccttgaa gttgttgcag gagagatatc
      961 cgatgaatcc attttattat gcctagatga gttcatggtt aatgatgtag ctgatgcatt
     1021 gatcctaaac cgattattta gtcatctttt tagcaatggt gctatacttg ttgctacgtc
     1081 aaaccgtgcc ccagacaatc tctatgaacg tgggttgcaa agagatcttt ttttaccatt
     1141 tattgccaca ctaaaggaaa gatgtgtagt acatgaaatc ggttcatcca tagattacag
     1201 aaaaaggacc tcggctgaag aaggtttcta cttcgtaaat aatgattcgt ctgacttttt
     1261 aaagcaaaaa tttaaagagt tagttgggga acatacagct cagccccagg tagcagaagt
     1321 tgttatgggc agaaaactac aggtaccact tggtgggaac ggatgtgcgt actttccttt
     1381 tgaggaacta tgtgacaaac ctctaggtgc tgctgactat tttggcttat gtaagaatta
     1441 tcatacattg gcgttagatg atgtgccaat atttgggctc cacaacagaa ctgcagccta
     1501 tcgatttgtc actttagttg atgtgatgta cgagaataag gcgaggttga tgtgtactgc
     1561 cgaagggact cctttccaac tatttgaaag gattgtgacc atcgctgatg ctcaaagtag
     1621 ggctcctaga acttcatcca ggtcaaggaa aaatgacgat tatgaccttt gtgtcgacaa
     1681 tgagctagga tttgctaaag accgcactat tagcaggttg acagagatga acagcagcga
     1741 gtatctcgag cagcatgcag aaatggtagc agagaagcaa cttcaaaccc aaacccaaag
     1801 tgatgaagac aaccatgatc atgtggtaca agcttgaaca tttcagtaaa tgattttgca
     1861 ttgaaatcgc cgaagtgacc gcctacattt tatggaaaaa taatgatgga aggcaagtat
     1921 gtataatttt taagtgcaga gaaggatata tgcatcaaca tcttgatgta ataaaactgc
     1981 attgtaattg taattgtaac tgtaaccaca tgtttaaata atttaacgtt tatgttgtac
     2041 gaatgttgtt caaaactgca ctgtaatgct taattaactt ggttgc
//
LOCUS       XM_071886057            2099 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904124), transcript variant X4, mRNA.
ACCESSION   XM_071886057
VERSION     XM_071886057.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2099
                     /gene="LOC139904124"
                     /note="uncharacterized LOC139904124; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139904124"
     CDS             320..1837
                     /gene="LOC139904124"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742158.1"
                     /db_xref="GeneID:139904124"
                     /translation="MRRAFVKSSGLIRSAFRHHGVKYVTGVEKRLLLSNINNGTLDNF
                     AYDTCKCGRPFYTFSRAISSSASEVSSKGENRAGPLVEYERRIEAGDLDDGDNSQIGT
                     LKEIQRLYDELVKSADACRLDRYSDSGKAGRSRWLWSRLIPQSTVSPVKGLYLYGGVG
                     TGKTMLMDLFYDQLPCTWRKKRIHFHDFMLTVHSRLQKHRGVADPLEVVAGEISDESI
                     LLCLDEFMVNDVADALILNRLFSHLFSNGAILVATSNRAPDNLYERGLQRDLFLPFIA
                     TLKERCVVHEIGSSIDYRKRTSAEEGFYFVNNDSSDFLKQKFKELVGEHTAQPQVAEV
                     VMGRKLQVPLGGNGCAYFPFEELCDKPLGAADYFGLCKNYHTLALDDVPIFGLHNRTA
                     AYRFVTLVDVMYENKARLMCTAEGTPFQLFERIVTIADAQSRAPRTSSRSRKNDDYDL
                     CVDNELGFAKDRTISRLTEMNSSEYLEQHAEMVAEKQLQTQTQSDEDNHDHVVQA"
     misc_feature    551..1759
                     /gene="LOC139904124"
                     /note="Cell division protein ZapE (Z ring-associated
                     ATPase), AFG1 superfamily [Cell cycle control, cell
                     division, chromosome partitioning]; Region: ZapE; COG1485"
                     /db_xref="CDD:441094"
ORIGIN      
        1 tccaacaaag taggttttca aaggccttcc ataactttag ggttccttat atatattttc
       61 tcatcattca gattaaattg catctgaacc ttatctattt atccaatttt ggataaatca
      121 tacaatcact gatattgctt ttatcttcta aagacagttt cttgcagact tcaatcgaat
      181 tatattatct gggttgcagt ttttgaaatt tgtatacttt tcttgatccg aattcaggat
      241 tattgtgatt ctctccccga ggcttacttt cattgctttg gtgcaatctg taaatcaaat
      301 ttaaagaact ggattgagga tgaggagggc ttttgtaaaa tcttctgggc taatacgctc
      361 ggcttttaga catcacggtg ttaaatatgt gaccggggta gaaaaaagat tgttgttatc
      421 aaatataaat aatgggactt tagataattt tgcttatgat acttgtaaat gcggacgacc
      481 tttctatacg ttttctagag ctatatcttc cagtgcttct gaagtgagct ctaaagggga
      541 gaacagagca gggcctcttg tggaatatga acgtagaatc gaagctggtg atcttgacga
      601 cggtgataat tcgcagatag gcacattaaa agaaattcaa cgactttatg atgagcttgt
      661 taaatcagct gatgcatgtc gtttggatcg ttattctgat tctgggaaag ctgggaggag
      721 taggtggtta tggtctcgtc tcataccaca gtctacagtc tcaccagtga aaggactcta
      781 tctttacgga ggagttggta ccggaaaaac aatgctgatg gatttatttt atgaccaact
      841 gccttgcact tggaggaaaa aaaggataca ttttcatgac ttcatgttga ctgtccatag
      901 tcgcttacaa aagcatagag gtgtagctga tccccttgaa gttgttgcag gagagatatc
      961 cgatgaatcc attttattat gcctagatga gttcatggtt aatgatgtag ctgatgcatt
     1021 gatcctaaac cgattattta gtcatctttt tagcaatggt gctatacttg ttgctacgtc
     1081 aaaccgtgcc ccagacaatc tctatgaacg tgggttgcaa agagatcttt ttttaccatt
     1141 tattgccaca ctaaaggaaa gatgtgtagt acatgaaatc ggttcatcca tagattacag
     1201 aaaaaggacc tcggctgaag aaggtttcta cttcgtaaat aatgattcgt ctgacttttt
     1261 aaagcaaaaa tttaaagagt tagttgggga acatacagct cagccccagg tagcagaagt
     1321 tgttatgggc agaaaactac aggtaccact tggtgggaac ggatgtgcgt actttccttt
     1381 tgaggaacta tgtgacaaac ctctaggtgc tgctgactat tttggcttat gtaagaatta
     1441 tcatacattg gcgttagatg atgtgccaat atttgggctc cacaacagaa ctgcagccta
     1501 tcgatttgtc actttagttg atgtgatgta cgagaataag gcgaggttga tgtgtactgc
     1561 cgaagggact cctttccaac tatttgaaag gattgtgacc atcgctgatg ctcaaagtag
     1621 ggctcctaga acttcatcca ggtcaaggaa aaatgacgat tatgaccttt gtgtcgacaa
     1681 tgagctagga tttgctaaag accgcactat tagcaggttg acagagatga acagcagcga
     1741 gtatctcgag cagcatgcag aaatggtagc agagaagcaa cttcaaaccc aaacccaaag
     1801 tgatgaagac aaccatgatc atgtggtaca agcttgaaca tttcattgat ggatcaggta
     1861 aatgattttg cattgaaatc gccgaagtga ccgcctacat tttatggaaa aataatgatg
     1921 gaaggcaagt atgtataatt tttaagtgca gagaaggata tatgcatcaa catcttgatg
     1981 taataaaact gcattgtaat tgtaattgta actgtaacca catgtttaaa taatttaacg
     2041 tttatgttgt acgaatgttg ttcaaaactg cactgtaatg cttaattaac ttggttgca
//
LOCUS       XM_071886058            1182 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904125), mRNA.
ACCESSION   XM_071886058
VERSION     XM_071886058.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1182
                     /gene="LOC139904125"
                     /note="uncharacterized LOC139904125; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139904125"
     CDS             198..719
                     /gene="LOC139904125"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742159.1"
                     /db_xref="GeneID:139904125"
                     /translation="MANQGAKKRRDENTRHINNLFRIIIACNVIYLLLRAGVFYSTFT
                     WLHWVGLILTSAAYYLCYQQLASMAKPTYTDDGDLLDGGFDMSTGGACGYLHDVIYIT
                     CFVQLMSIISGKFWWIYAVIPAYAVFKGWGLIKGFLPQGGEGIEEDEKTRKKREKMEK
                     KASRGKFVKAKGR"
     misc_feature    198..644
                     /gene="LOC139904125"
                     /note="SRP-independent targeting protein 2/TMEM208;
                     Region: TMEM208_SND2; pfam05620"
                     /db_xref="CDD:428546"
ORIGIN      
        1 attgttctac ctacaaaacc caaagacccc ttgaacattg tttatatcaa aaattgatcg
       61 ccggtatcac cgagtctcaa ctcaacgctg gtaagcaaac caaagctcag ctcaatagta
      121 tctcttcccc aattcagact ccacctagac ctagggttta ttcttctatt ttgacttagt
      181 caaatcaaat ccaataaatg gcaaatcaag gtgccaagaa acgaagggat gaaaacactc
      241 gccatatcaa caatctcttt cgtatcatca tcgcctgcaa tgtcatttat ctgttgttaa
      301 gggcaggggt gttctactcc actttcacat ggctgcattg ggtcggcctg atactgactt
      361 cagcagccta ctatctttgc tatcaacaac tagcatcaat ggcaaagcct acctatacag
      421 atgatgggga ccttttagat ggtggatttg atatgagtac tggtggagct tgtggatacc
      481 ttcatgatgt tatttacata acctgctttg tgcaactcat gtctatcatc tctgggaagt
      541 tttggtggat atatgctgtg ataccagcat atgctgtgtt taagggatgg ggtctaatca
      601 agggatttct ccctcaaggt ggcgagggca ttgaggagga tgaaaagacc cgaaagaaaa
      661 gagagaaaat ggaaaagaaa gcctcgagag gaaaatttgt taaagctaaa ggtcgataat
      721 ttcagacttt gtaacatctt tctttgtcat ccgagtattt agtctcattg taatgatcta
      781 cccatatgta atcgtgttag acttatgggc tagaaattca tatactagtt ttttaaattt
      841 gagcttattc ccgcatttaa gtgcttggaa gtgaatacta aagacacgtg tcatctgcag
      901 tccacattgt tttcccaatg aggttagctg gtgtaaaact ttctagtaga aggccttggg
      961 tttagttaaa tgcatcaaat ttgttcactc agatttcaca tgatggagac tgaacacaac
     1021 ttcatggtca aatcttgttc caataaacag tcatttgtac tttgttgtac gtttttgtgt
     1081 gggtttctgt tataagttaa actaatcaga tactactact actacatggg tctcatgtac
     1141 tgtcatgttc accaggttca aatgaatttc ttacctctcc ta
//
LOCUS       XM_071886059            2093 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable LRR receptor-like
            serine/threonine-protein kinase At4g30520 (LOC139904126), mRNA.
ACCESSION   XM_071886059
VERSION     XM_071886059.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2093
                     /gene="LOC139904126"
                     /note="probable LRR receptor-like serine/threonine-protein
                     kinase At4g30520; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 77 Proteins"
                     /db_xref="GeneID:139904126"
     CDS             24..1907
                     /gene="LOC139904126"
                     /codon_start=1
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At4g30520"
                     /protein_id="XP_071742160.1"
                     /db_xref="GeneID:139904126"
                     /translation="MIITMLHTLSFFLLLLPIVSLSYEPRNPEVIALMTIKNGLNDPH
                     GALNNWDEFSVDPCSWAMITCSPDNLVTGIGIPSQGLSGTLSGVIANLTNLRQVLLQN
                     NNISGHIPAGIGHLPKLQTLDLSNNKLTGHVPETLSLLNGLEYLRLNNNSLSGAIPLS
                     LASVPQLALLDLSYNNLSGPVPKFSARTFNIVGNPMICGSHVNEGCYASTMPEPLSFE
                     INTSQGKSKSKRVAIALGISLGCLVLLIVSLGVLLWQRSRNQKQSVLDFNDIPEEGLT
                     SLGNLRSFTFKELQYATNNFSSKNILGAGGFGNVYKGKLGDGTIVAVKRLKDINGTAG
                     ESQFRTELELISLAVHRNLLRLIGYCATPVERLLVYPFMSNGSVASRLKGKPSLDWNA
                     RKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEFQEAVVGDFGLAKLLDHADSH
                     VTTEVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAFEFGKTANQKGAML
                     EWVKKSHQDKKVEVLADKELGTNYDQIDVGEMLQVALLCTQYTPAHRPRMSEVVRMLE
                     GDGLAEKWAATHNQINLNTLRKNGMVQKIDDNDDDYTSSMLGVMLMDDDHDAHAMELS
                     GPR"
     misc_feature    <75..800
                     /gene="LOC139904126"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03150"
                     /db_xref="CDD:178695"
     misc_feature    306..377
                     /gene="LOC139904126"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    378..449
                     /gene="LOC139904126"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    450..521
                     /gene="LOC139904126"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    927..1727
                     /gene="LOC139904126"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(927..938,945..947,951..953,987..989,993..995,
                     1083..1085,1131..1142,1278..1280,1290..1295,1299..1301,
                     1329..1334)
                     /gene="LOC139904126"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271134"
ORIGIN      
        1 ttaatgttct tcacttgcat tcaatgatca ttaccatgct tcatactctt agtttttttc
       61 ttcttttgtt gcctatcgtt tctctctcct atgaacctcg caatccagaa gttatagctt
      121 taatgaccat taaaaatggc ttaaatgatc ctcatggagc tcttaacaat tgggatgaat
      181 tttctgttga cccttgtagc tgggctatga ttacttgttc ccctgataat cttgtcactg
      241 gcattggaat tccaagtcaa ggtttatcag gaacactatc tggtgttatt gctaatctca
      301 caaacctccg gcaagtgtta ctgcagaaca acaatatctc cggccatatt ccggcaggaa
      361 taggtcacct tccaaagctt cagacattgg atctgtcaaa caataagcta actggtcacg
      421 tgccggagac actcagtctt ttgaatggct tagaatacct aaggttgaat aacaacagct
      481 tgtctggagc tatccctttg tctttagctt ctgttcctca acttgcactc ttagatttgt
      541 cttacaataa tctcagtggt cctgttccaa agttttctgc aagaacattc aatattgtgg
      601 gtaatcctat gatctgtggg agtcatgtta atgaaggttg ttacgcatca actatgccag
      661 agcctctttc gtttgaaatt aatacatctc aagggaaaag taagtcgaaa agagtagcaa
      721 ttgctcttgg aatcagtctt ggttgtttgg ttcttctcat tgtgtccctt ggagttctct
      781 tatggcaaag aagcaggaat cagaagcaaa gtgttcttga ttttaatgac ataccagagg
      841 agggtttaac gagcttaggc aacttaagaa gtttcacatt caaagaactc caatacgcaa
      901 ccaacaattt cagctcaaaa aacattcttg gagccggcgg atttggtaac gtttacaagg
      961 gaaagttagg agacgggaca attgtagcag tcaaacgttt gaaagacatt aatggcaccg
     1021 ctggagaatc acagttccga acagaactgg aactcattag cttagcggtt caccgaaatt
     1081 tgctccggtt aatcggttac tgtgcgaccc cggttgaaag gctcttggtt taccctttca
     1141 tgtctaatgg cagtgtagct tccaggctta aaggtaagcc atcattggac tggaacgcac
     1201 gaaagagaat agcaatagga gctgcaagag gcttgttgta tctgcacgag caatgcgatc
     1261 caaagatcat acaccgagac gttaaggcgg ctaacgttct tttagatgag tttcaagagg
     1321 ctgttgtggg tgattttggg ctcgctaaac tccttgatca tgctgattcg catgtgacta
     1381 cagaggttcg tggtacggtg ggccacattg cacctgaata tctgtctacg ggccagtcat
     1441 cagagaaaac tgacgtattc ggtttcggga ttttgttgct cgaacttata actggaatga
     1501 gagcttttga gtttgggaaa acggctaatc agaaaggtgc aatgcttgaa tgggtgaaaa
     1561 aatcgcacca agataagaag gttgaagtgt tagcggacaa agagctggga accaactatg
     1621 atcaaataga tgtgggtgag atgctacaag tagcgttact atgtacacaa tacaccccgg
     1681 cccaccgacc acgaatgtcg gaagtggtta ggatgctcga gggggacggt ttagccgaaa
     1741 aatgggcagc aacacataac caaataaatc tcaacacctt aagaaaaaat gggatggtcc
     1801 aaaaaattga tgacaatgat gatgactata catcaagcat gcttggggtg atgttgatgg
     1861 atgatgacca tgatgcccat gccatggagc tctctggtcc taggtgatca taaaatgtta
     1921 aataaccaga tagaaatagt aaggaatgaa gtgctacatt tggtaatgtt ttattttatt
     1981 tttttagtga ttattattta attatatgcg aagtggaggt atattgttgg tagataatta
     2041 aatatgtttg agatgtttta attttattct ctctagatag ggtttggtgt att
//
LOCUS       XM_071886060             719 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein bL35c-like (LOC139904127), mRNA.
ACCESSION   XM_071886060
VERSION     XM_071886060.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..719
                     /gene="LOC139904127"
                     /note="large ribosomal subunit protein bL35c-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904127"
     CDS             95..556
                     /gene="LOC139904127"
                     /codon_start=1
                     /product="large ribosomal subunit protein bL35c-like"
                     /protein_id="XP_071742161.1"
                     /db_xref="GeneID:139904127"
                     /translation="MASSTFLSCTSLLAPIKSMQRNNPICCNTTVCFSQFAKTATPLN
                     LSSSSHTISGFSPLISSKTLIVSSPNTKPKSLTIVAAKGYKMKTHKASAKRFRVTGTG
                     KIVRRRAGKQHLLRKKNAKRRTRLSKTVQVDRCDYNNVIGALPYLKVNRAN"
     misc_feature    347..532
                     /gene="LOC139904127"
                     /note="Ribosomal protein L35 [Translation, ribosomal
                     structure and biogenesis]; Region: RpmI; COG0291"
                     /db_xref="CDD:440060"
     polyA_site      719
                     /gene="LOC139904127"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgttatagc tatagtacaa cgcgaaagat agagaaatcc tcaaatcctt ttatccactc
       61 acacagaaac agagctccat caagaaaaca aacaatggca tcttcaactt ttttaagttg
      121 cacttcactc ttagctccaa ttaaatctat gcaaagaaac aatcctattt gttgtaatac
      181 cacagtttgt ttctcacaat ttgcaaaaac agcaacccca ttaaacttat catcatcatc
      241 acacaccatc tctggcttct ccccactgat ttcaagtaaa accctaattg tatcttcacc
      301 caatacaaaa cctaaatctc tcacaattgt agctgcaaag ggctataaga tgaaaactca
      361 caaggcatct gcaaagagat ttcgtgtaac gggtactggg aagatagtga ggaggagagc
      421 tgggaagcag catttgctaa gaaagaagaa tgctaagagg agaacacgtc tctctaaaac
      481 ggtacaagtt gatcggtgtg actacaacaa tgtgatagga gccttgccgt atttgaaggt
      541 taaccgagcc aactaggccc agttgggatc ggtcagatac tatagctttg tcattgttaa
      601 tttgttatta cgcatccttt ttgttgtact tttggtttcg aattgcagcc tttctactca
      661 tcccctttgt tgtagtttat tgccactgca gataacgaaa tgcaaatcgt attgtgacc
//
LOCUS       XM_071886061            3799 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides autophagy-related protein 11
            (LOC139904129), transcript variant X1, mRNA.
ACCESSION   XM_071886061
VERSION     XM_071886061.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3799
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3799
                     /gene="LOC139904129"
                     /note="autophagy-related protein 11; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139904129"
     CDS             309..3557
                     /gene="LOC139904129"
                     /codon_start=1
                     /product="autophagy-related protein 11 isoform X1"
                     /protein_id="XP_071742162.1"
                     /db_xref="GeneID:139904129"
                     /translation="MSSSENVIQRGKLLVHIAENGHSFELDCDEDTLVVSVQRYLESL
                     SGIRLTDQLLLYLDLKLEPQSPLSTYKLPSDDREVFVFNKSKMRSNSAPPGPEEEFEL
                     SENIYVDPPQPTSSLDPHPLDEAPDPALKALPSYERQFRYHYQLGDAIYRRTLMKYNA
                     CEKLAREQRVQEKALEIARGNLDHFYKMINQNYMDFVKCYSQQQRTHSNLLVNFGRDL
                     ERLKSIKLLPFLQTADRKCLLDFVKEDNLRKMVDDCNNSHRQFECKVGDFKHEFGELK
                     RSTEHLFSNKASILSRDLERTVKEHEHHINEQKSIMQALSKDVGLVKKLVDDCLTSQL
                     SSSLRPHDAVSALGPMYEGHDKSYLPKMQSCEHAVSNLLVFCKNKKSEMNNFVHKYMQ
                     KIAYIQYTIKEVRYKFSVFTEALKRQNDQFEQLKVIRGIGPAYRACLAEIVRRKASMK
                     LYMGMAGQLAERLATKRESEIRRREEFLKVNSSFIPRDVLASMGLYDTPSTCDVNVAP
                     FDTNLLDIDISDLDRFAPEHLLGLSLKKSSSSMSQDAEISSESGTETYNDFIEGSELV
                     EIAGTSKLEVENAKLKAELASAIAMLCTFSPEVDFEDGEVGNMLKNSAEKTAEALHLK
                     DEHEKHLLNMLKVKHMQCESYEKRIKELENRLSDQYSIEPKLNKDESTRFTSSEPMDE
                     TSYASSSLLLKSGCNDSSGTTNVHLDSSMVEPNRDEKDDKETVVADVGMVLATSSTGD
                     YMPPPMKSLTCDEQVKASGDLVVELQNLLAEKSNQLHDTETKLQAAMEEVTRLSGELE
                     ISRNLLDESQMNCAHLENCLHEAREEAQTHLCAADRRASEYTALRASAVKIRSLFERL
                     KTCVSSAGVAGFSESLRSLAQSLANSANENGDDGTAEFRECVRVLAEKVGVLTRQRSE
                     LIDRYTKAETSHEHLTKELEEKKELVNTLYTKLQSEKQVNKEKISFGRLELHEIAAFV
                     LNVAGHYEAINRNCSHYYLSSESVSLFADHLPHRPTYIVGQIVHIERQTVKSSPVLAE
                     RATTTSSGQGQGQFHLNSGTNPYGLSAGSEYFVVTVAILPDNAIHSPTAAAS"
     misc_feature    789..1763
                     /gene="LOC139904129"
                     /note="Autophagy protein ATG17-like domain; Region:
                     ATG17_like; pfam04108"
                     /db_xref="CDD:427715"
     misc_feature    <2562..>3164
                     /gene="LOC139904129"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     misc_feature    3099..3509
                     /gene="LOC139904129"
                     /note="Autophagy-related protein 11; Region: ATG11;
                     pfam10377"
                     /db_xref="CDD:463063"
ORIGIN      
        1 ggaatttaac agtaaaaaaa cacccacaaa atttcacaaa aatcatcaaa gagaaaaatt
       61 ctgttgtttt tgttccaaaa tactgaaatt gtggaacagg aacagaacta caagtataaa
      121 aagaaggaag ttcttttttt tattcatctt cttgtgatgt gccttgtggt ttactcatct
      181 gatataagat taaggtgatg gtgaaaaggt agctggattg atcaaatcgg ttgagggtaa
      241 attggtcttc ttttgctgtt tttatctcca tctttgtaat attattaggt tttttagggt
      301 tcgaaaagat gagttcaagt gaaaatgtga tacaaagggg taagctttta gttcatatag
      361 ccgagaacgg tcattcgttt gagcttgatt gtgacgaaga tacccttgtt gtatcagttc
      421 aacgatattt agaatcgctt tctggaattc ggttaaccga tcagcttctt ttgtatttgg
      481 atttgaaatt agaacctcaa agtccactct ctacgtataa actcccatcc gatgatcgag
      541 aggtttttgt tttcaataaa tccaaaatgc gaagcaattc ggccccacct ggacccgaag
      601 aagaatttga gttatctgaa aatatctatg tagacccacc tcagcctact tcatctcttg
      661 atccacatcc attagatgaa gccccggacc ccgctttaaa ggcattaccg tcatacgaac
      721 gacagtttag gtaccattat cagctcgggg acgctattta ccgacgcaca cttatgaaat
      781 acaacgcctg tgaaaaactt gcaagagagc aaagggtgca agagaaggca ctggaaattg
      841 ctaggggtaa tttggaccat ttctataaga tgatcaatca gaactacatg gatttcgtca
      901 agtgttattc acagcagcaa aggacacatt cgaatctttt agtgaatttc ggtcgtgatt
      961 tagagcgact aaagtctatc aaacttctac cgtttttaca aactgctgat cgcaagtgtt
     1021 tactggattt tgtgaaagaa gataatttaa gaaaaatggt ggatgattgc aacaattctc
     1081 accggcaatt tgaatgtaaa gttggagact ttaagcatga atttggtgaa ttaaagcgaa
     1141 gcaccgagca tttgttttct aataaagctt caatcctcag tagggatctg gaacgaacag
     1201 ttaaggagca tgaacatcat attaatgagc agaaaagtat aatgcaagca ttgagtaaag
     1261 atgttggctt ggtgaagaaa cttgtggacg attgtttgac cagtcaactc tccagttctc
     1321 tccgtcctca cgatgctgtg tcagcattag gtcccatgta cgagggccac gacaaaagtt
     1381 atcttcctaa aatgcaatca tgtgagcacg cggtttccaa cctactcgtt ttctgcaaaa
     1441 acaagaagtc ggaaatgaac aattttgttc acaagtacat gcaaaagatt gcatacattc
     1501 agtacaccat caaagaagta aggtacaagt tttcagtttt caccgaagca ctaaaacgcc
     1561 agaatgatca gtttgagcag ttgaaagtga ttcgtggcat cgggcccgca tatagagcgt
     1621 gtcttgctga gatagtgcgg agaaaagcgt caatgaaact ttatatgggc atggctggac
     1681 aattagccga aagacttgcg actaaacggg aatcagaaat aagaagaaga gaagaatttc
     1741 ttaaagtcaa cagttcgttt ataccgagag acgttttagc atcgatgggg ttatatgata
     1801 ctccaagcac atgtgatgtc aatgtagctc catttgatac taatttactc gatatcgata
     1861 tatcagattt ggaccgtttt gcccctgagc atttgttagg actttctttg aaaaaaagtt
     1921 cgtcttcaat gtctcaagat gctgaaataa gttctgaaag tggtaccgaa acttataatg
     1981 attttatcga gggttctgaa ctggtcgaga ttgcggggac tagcaaactt gaagtcgaaa
     2041 acgcaaagtt aaaagccgaa cttgcgtctg caatagctat gctttgtact ttttcacctg
     2101 aagttgattt tgaagatggt gaagttggaa atatgctaaa aaactcagct gaaaaaactg
     2161 ctgaggcgtt gcatttgaaa gatgaacacg agaagcattt gttgaatatg ttgaaagtca
     2221 aacatatgca gtgtgaatcg tatgagaaac gaataaaaga gcttgaaaat aggttgtcgg
     2281 atcagtattc tatagaaccc aaacttaata aagatgagtc aactcggttc acatcatccg
     2341 agccaatgga tgagacttct tatgcttcaa gctcgttact tttaaaatcg ggatgtaatg
     2401 attcttctgg aacaacaaat gtacatctgg actcatcgat ggtggagccc aaccgagatg
     2461 aaaaagacga taaggagacg gtggtggcgg atgtggggat ggtgttagcc acgagttcaa
     2521 ctggtgatta catgccgcca cctatgaaaa gtttgacttg tgatgaacag gtcaaagcta
     2581 gtggtgatct tgtggtggag ttgcagaact tacttgctga aaaatcaaat cagctacatg
     2641 atacggaaac taagctccaa gctgcaatgg aggaggttac aaggttgagc ggtgagctgg
     2701 aaattagtcg gaatcttcta gatgaatctc agatgaattg tgctcactta gagaactgtc
     2761 tacatgaagc aagagaagag gctcaaactc atctttgtgc agccgatcgt cgggcatccg
     2821 aatataccgc gttgcgggcc tctgctgtca aaatccgcag tctcttcgaa aggctaaaaa
     2881 cgtgcgtttc ttcagccggc gtggccggtt tttcagagtc tcttcgctcg ttagctcaat
     2941 ctcttgccaa ttctgctaat gagaatgggg atgatggcac tgccgagttc cgtgaatgtg
     3001 ttcgtgtgct tgccgagaag gttggtgttt tgacgagaca acgatctgag ctaatcgata
     3061 ggtacacaaa ggcggagaca tcacatgagc atcttacaaa ggagttggaa gaaaagaaag
     3121 aattggtcaa cactttgtac accaagcttc aatccgaaaa acaggtgaac aaggagaaga
     3181 tatcattcgg tcgtttggag cttcatgaga tagctgcatt tgtacttaac gtagctggac
     3241 actacgaggc catcaaccga aactgcagtc attactatct ttcttcagag tcggtttcct
     3301 tatttgctga ccaccttcca catcgcccga cctatattgt aggccaaatt gtgcatatcg
     3361 aaagacaaac tgtgaaatca tctccggttc tagccgaacg tgccaccacc acctcctcgg
     3421 gccagggtca gggccaattt catttgaatt caggtacaaa tccgtatggt ctatctgcgg
     3481 ggagcgagta ttttgtggtg acagtagcca tattacctga taacgccatt cattcaccca
     3541 ctgctgctgc ttcctgatcg tgaaaactcg gtaagatatg atggaagaac taaaaaaaca
     3601 gctgggacaa gtgtatatag ttgacataat gaaaagaaaa aaaaatactg ttgatttaaa
     3661 tttaattcca ctttcatgta cagttgatga tgatcataat ctttatgctt agttgtatat
     3721 attaaatctc ccttgatcat gtaaaataac cctacataaa atcgttttaa ttgaaccgtt
     3781 atctgttgat gaaattgtg
//
LOCUS       XM_071886062            3622 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides autophagy-related protein 11
            (LOC139904129), transcript variant X2, mRNA.
ACCESSION   XM_071886062
VERSION     XM_071886062.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3622
                     /gene="LOC139904129"
                     /note="autophagy-related protein 11; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139904129"
     CDS             132..3380
                     /gene="LOC139904129"
                     /codon_start=1
                     /product="autophagy-related protein 11 isoform X1"
                     /protein_id="XP_071742163.1"
                     /db_xref="GeneID:139904129"
                     /translation="MSSSENVIQRGKLLVHIAENGHSFELDCDEDTLVVSVQRYLESL
                     SGIRLTDQLLLYLDLKLEPQSPLSTYKLPSDDREVFVFNKSKMRSNSAPPGPEEEFEL
                     SENIYVDPPQPTSSLDPHPLDEAPDPALKALPSYERQFRYHYQLGDAIYRRTLMKYNA
                     CEKLAREQRVQEKALEIARGNLDHFYKMINQNYMDFVKCYSQQQRTHSNLLVNFGRDL
                     ERLKSIKLLPFLQTADRKCLLDFVKEDNLRKMVDDCNNSHRQFECKVGDFKHEFGELK
                     RSTEHLFSNKASILSRDLERTVKEHEHHINEQKSIMQALSKDVGLVKKLVDDCLTSQL
                     SSSLRPHDAVSALGPMYEGHDKSYLPKMQSCEHAVSNLLVFCKNKKSEMNNFVHKYMQ
                     KIAYIQYTIKEVRYKFSVFTEALKRQNDQFEQLKVIRGIGPAYRACLAEIVRRKASMK
                     LYMGMAGQLAERLATKRESEIRRREEFLKVNSSFIPRDVLASMGLYDTPSTCDVNVAP
                     FDTNLLDIDISDLDRFAPEHLLGLSLKKSSSSMSQDAEISSESGTETYNDFIEGSELV
                     EIAGTSKLEVENAKLKAELASAIAMLCTFSPEVDFEDGEVGNMLKNSAEKTAEALHLK
                     DEHEKHLLNMLKVKHMQCESYEKRIKELENRLSDQYSIEPKLNKDESTRFTSSEPMDE
                     TSYASSSLLLKSGCNDSSGTTNVHLDSSMVEPNRDEKDDKETVVADVGMVLATSSTGD
                     YMPPPMKSLTCDEQVKASGDLVVELQNLLAEKSNQLHDTETKLQAAMEEVTRLSGELE
                     ISRNLLDESQMNCAHLENCLHEAREEAQTHLCAADRRASEYTALRASAVKIRSLFERL
                     KTCVSSAGVAGFSESLRSLAQSLANSANENGDDGTAEFRECVRVLAEKVGVLTRQRSE
                     LIDRYTKAETSHEHLTKELEEKKELVNTLYTKLQSEKQVNKEKISFGRLELHEIAAFV
                     LNVAGHYEAINRNCSHYYLSSESVSLFADHLPHRPTYIVGQIVHIERQTVKSSPVLAE
                     RATTTSSGQGQGQFHLNSGTNPYGLSAGSEYFVVTVAILPDNAIHSPTAAAS"
     misc_feature    612..1586
                     /gene="LOC139904129"
                     /note="Autophagy protein ATG17-like domain; Region:
                     ATG17_like; pfam04108"
                     /db_xref="CDD:427715"
     misc_feature    <2385..>2987
                     /gene="LOC139904129"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     misc_feature    2922..3332
                     /gene="LOC139904129"
                     /note="Autophagy-related protein 11; Region: ATG11;
                     pfam10377"
                     /db_xref="CDD:463063"
ORIGIN      
        1 caaattcgca aattaaggtg atggtgaaaa ggtagctgga ttgatcaaat cggttgaggg
       61 taaattggtc ttcttttgct gtttttatct ccatctttgt aatattatta ggttttttag
      121 ggttcgaaaa gatgagttca agtgaaaatg tgatacaaag gggtaagctt ttagttcata
      181 tagccgagaa cggtcattcg tttgagcttg attgtgacga agataccctt gttgtatcag
      241 ttcaacgata tttagaatcg ctttctggaa ttcggttaac cgatcagctt cttttgtatt
      301 tggatttgaa attagaacct caaagtccac tctctacgta taaactccca tccgatgatc
      361 gagaggtttt tgttttcaat aaatccaaaa tgcgaagcaa ttcggcccca cctggacccg
      421 aagaagaatt tgagttatct gaaaatatct atgtagaccc acctcagcct acttcatctc
      481 ttgatccaca tccattagat gaagccccgg accccgcttt aaaggcatta ccgtcatacg
      541 aacgacagtt taggtaccat tatcagctcg gggacgctat ttaccgacgc acacttatga
      601 aatacaacgc ctgtgaaaaa cttgcaagag agcaaagggt gcaagagaag gcactggaaa
      661 ttgctagggg taatttggac catttctata agatgatcaa tcagaactac atggatttcg
      721 tcaagtgtta ttcacagcag caaaggacac attcgaatct tttagtgaat ttcggtcgtg
      781 atttagagcg actaaagtct atcaaacttc taccgttttt acaaactgct gatcgcaagt
      841 gtttactgga ttttgtgaaa gaagataatt taagaaaaat ggtggatgat tgcaacaatt
      901 ctcaccggca atttgaatgt aaagttggag actttaagca tgaatttggt gaattaaagc
      961 gaagcaccga gcatttgttt tctaataaag cttcaatcct cagtagggat ctggaacgaa
     1021 cagttaagga gcatgaacat catattaatg agcagaaaag tataatgcaa gcattgagta
     1081 aagatgttgg cttggtgaag aaacttgtgg acgattgttt gaccagtcaa ctctccagtt
     1141 ctctccgtcc tcacgatgct gtgtcagcat taggtcccat gtacgagggc cacgacaaaa
     1201 gttatcttcc taaaatgcaa tcatgtgagc acgcggtttc caacctactc gttttctgca
     1261 aaaacaagaa gtcggaaatg aacaattttg ttcacaagta catgcaaaag attgcataca
     1321 ttcagtacac catcaaagaa gtaaggtaca agttttcagt tttcaccgaa gcactaaaac
     1381 gccagaatga tcagtttgag cagttgaaag tgattcgtgg catcgggccc gcatatagag
     1441 cgtgtcttgc tgagatagtg cggagaaaag cgtcaatgaa actttatatg ggcatggctg
     1501 gacaattagc cgaaagactt gcgactaaac gggaatcaga aataagaaga agagaagaat
     1561 ttcttaaagt caacagttcg tttataccga gagacgtttt agcatcgatg gggttatatg
     1621 atactccaag cacatgtgat gtcaatgtag ctccatttga tactaattta ctcgatatcg
     1681 atatatcaga tttggaccgt tttgcccctg agcatttgtt aggactttct ttgaaaaaaa
     1741 gttcgtcttc aatgtctcaa gatgctgaaa taagttctga aagtggtacc gaaacttata
     1801 atgattttat cgagggttct gaactggtcg agattgcggg gactagcaaa cttgaagtcg
     1861 aaaacgcaaa gttaaaagcc gaacttgcgt ctgcaatagc tatgctttgt actttttcac
     1921 ctgaagttga ttttgaagat ggtgaagttg gaaatatgct aaaaaactca gctgaaaaaa
     1981 ctgctgaggc gttgcatttg aaagatgaac acgagaagca tttgttgaat atgttgaaag
     2041 tcaaacatat gcagtgtgaa tcgtatgaga aacgaataaa agagcttgaa aataggttgt
     2101 cggatcagta ttctatagaa cccaaactta ataaagatga gtcaactcgg ttcacatcat
     2161 ccgagccaat ggatgagact tcttatgctt caagctcgtt acttttaaaa tcgggatgta
     2221 atgattcttc tggaacaaca aatgtacatc tggactcatc gatggtggag cccaaccgag
     2281 atgaaaaaga cgataaggag acggtggtgg cggatgtggg gatggtgtta gccacgagtt
     2341 caactggtga ttacatgccg ccacctatga aaagtttgac ttgtgatgaa caggtcaaag
     2401 ctagtggtga tcttgtggtg gagttgcaga acttacttgc tgaaaaatca aatcagctac
     2461 atgatacgga aactaagctc caagctgcaa tggaggaggt tacaaggttg agcggtgagc
     2521 tggaaattag tcggaatctt ctagatgaat ctcagatgaa ttgtgctcac ttagagaact
     2581 gtctacatga agcaagagaa gaggctcaaa ctcatctttg tgcagccgat cgtcgggcat
     2641 ccgaatatac cgcgttgcgg gcctctgctg tcaaaatccg cagtctcttc gaaaggctaa
     2701 aaacgtgcgt ttcttcagcc ggcgtggccg gtttttcaga gtctcttcgc tcgttagctc
     2761 aatctcttgc caattctgct aatgagaatg gggatgatgg cactgccgag ttccgtgaat
     2821 gtgttcgtgt gcttgccgag aaggttggtg ttttgacgag acaacgatct gagctaatcg
     2881 ataggtacac aaaggcggag acatcacatg agcatcttac aaaggagttg gaagaaaaga
     2941 aagaattggt caacactttg tacaccaagc ttcaatccga aaaacaggtg aacaaggaga
     3001 agatatcatt cggtcgtttg gagcttcatg agatagctgc atttgtactt aacgtagctg
     3061 gacactacga ggccatcaac cgaaactgca gtcattacta tctttcttca gagtcggttt
     3121 ccttatttgc tgaccacctt ccacatcgcc cgacctatat tgtaggccaa attgtgcata
     3181 tcgaaagaca aactgtgaaa tcatctccgg ttctagccga acgtgccacc accacctcct
     3241 cgggccaggg tcagggccaa tttcatttga attcaggtac aaatccgtat ggtctatctg
     3301 cggggagcga gtattttgtg gtgacagtag ccatattacc tgataacgcc attcattcac
     3361 ccactgctgc tgcttcctga tcgtgaaaac tcggtaagat atgatggaag aactaaaaaa
     3421 acagctggga caagtgtata tagttgacat aatgaaaaga aaaaaaaata ctgttgattt
     3481 aaatttaatt ccactttcat gtacagttga tgatgatcat aatctttatg cttagttgta
     3541 tatattaaat ctcccttgat catgtaaaat aaccctacat aaaatcgttt taattgaacc
     3601 gttatctgtt gatgaaattg tg
//
LOCUS       XM_071886063            3689 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides autophagy-related protein 11
            (LOC139904129), transcript variant X3, mRNA.
ACCESSION   XM_071886063
VERSION     XM_071886063.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3689
                     /gene="LOC139904129"
                     /note="autophagy-related protein 11; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139904129"
     CDS             199..3447
                     /gene="LOC139904129"
                     /codon_start=1
                     /product="autophagy-related protein 11 isoform X1"
                     /protein_id="XP_071742164.1"
                     /db_xref="GeneID:139904129"
                     /translation="MSSSENVIQRGKLLVHIAENGHSFELDCDEDTLVVSVQRYLESL
                     SGIRLTDQLLLYLDLKLEPQSPLSTYKLPSDDREVFVFNKSKMRSNSAPPGPEEEFEL
                     SENIYVDPPQPTSSLDPHPLDEAPDPALKALPSYERQFRYHYQLGDAIYRRTLMKYNA
                     CEKLAREQRVQEKALEIARGNLDHFYKMINQNYMDFVKCYSQQQRTHSNLLVNFGRDL
                     ERLKSIKLLPFLQTADRKCLLDFVKEDNLRKMVDDCNNSHRQFECKVGDFKHEFGELK
                     RSTEHLFSNKASILSRDLERTVKEHEHHINEQKSIMQALSKDVGLVKKLVDDCLTSQL
                     SSSLRPHDAVSALGPMYEGHDKSYLPKMQSCEHAVSNLLVFCKNKKSEMNNFVHKYMQ
                     KIAYIQYTIKEVRYKFSVFTEALKRQNDQFEQLKVIRGIGPAYRACLAEIVRRKASMK
                     LYMGMAGQLAERLATKRESEIRRREEFLKVNSSFIPRDVLASMGLYDTPSTCDVNVAP
                     FDTNLLDIDISDLDRFAPEHLLGLSLKKSSSSMSQDAEISSESGTETYNDFIEGSELV
                     EIAGTSKLEVENAKLKAELASAIAMLCTFSPEVDFEDGEVGNMLKNSAEKTAEALHLK
                     DEHEKHLLNMLKVKHMQCESYEKRIKELENRLSDQYSIEPKLNKDESTRFTSSEPMDE
                     TSYASSSLLLKSGCNDSSGTTNVHLDSSMVEPNRDEKDDKETVVADVGMVLATSSTGD
                     YMPPPMKSLTCDEQVKASGDLVVELQNLLAEKSNQLHDTETKLQAAMEEVTRLSGELE
                     ISRNLLDESQMNCAHLENCLHEAREEAQTHLCAADRRASEYTALRASAVKIRSLFERL
                     KTCVSSAGVAGFSESLRSLAQSLANSANENGDDGTAEFRECVRVLAEKVGVLTRQRSE
                     LIDRYTKAETSHEHLTKELEEKKELVNTLYTKLQSEKQVNKEKISFGRLELHEIAAFV
                     LNVAGHYEAINRNCSHYYLSSESVSLFADHLPHRPTYIVGQIVHIERQTVKSSPVLAE
                     RATTTSSGQGQGQFHLNSGTNPYGLSAGSEYFVVTVAILPDNAIHSPTAAAS"
     misc_feature    679..1653
                     /gene="LOC139904129"
                     /note="Autophagy protein ATG17-like domain; Region:
                     ATG17_like; pfam04108"
                     /db_xref="CDD:427715"
     misc_feature    <2452..>3054
                     /gene="LOC139904129"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     misc_feature    2989..3399
                     /gene="LOC139904129"
                     /note="Autophagy-related protein 11; Region: ATG11;
                     pfam10377"
                     /db_xref="CDD:463063"
ORIGIN      
        1 cagtcttgat ttagataaat tcaattttta atcgagagaa tcttggtggg tcttctgaat
       61 cttgattaga atttaaagat taaggtgatg gtgaaaaggt agctggattg atcaaatcgg
      121 ttgagggtaa attggtcttc ttttgctgtt tttatctcca tctttgtaat attattaggt
      181 tttttagggt tcgaaaagat gagttcaagt gaaaatgtga tacaaagggg taagctttta
      241 gttcatatag ccgagaacgg tcattcgttt gagcttgatt gtgacgaaga tacccttgtt
      301 gtatcagttc aacgatattt agaatcgctt tctggaattc ggttaaccga tcagcttctt
      361 ttgtatttgg atttgaaatt agaacctcaa agtccactct ctacgtataa actcccatcc
      421 gatgatcgag aggtttttgt tttcaataaa tccaaaatgc gaagcaattc ggccccacct
      481 ggacccgaag aagaatttga gttatctgaa aatatctatg tagacccacc tcagcctact
      541 tcatctcttg atccacatcc attagatgaa gccccggacc ccgctttaaa ggcattaccg
      601 tcatacgaac gacagtttag gtaccattat cagctcgggg acgctattta ccgacgcaca
      661 cttatgaaat acaacgcctg tgaaaaactt gcaagagagc aaagggtgca agagaaggca
      721 ctggaaattg ctaggggtaa tttggaccat ttctataaga tgatcaatca gaactacatg
      781 gatttcgtca agtgttattc acagcagcaa aggacacatt cgaatctttt agtgaatttc
      841 ggtcgtgatt tagagcgact aaagtctatc aaacttctac cgtttttaca aactgctgat
      901 cgcaagtgtt tactggattt tgtgaaagaa gataatttaa gaaaaatggt ggatgattgc
      961 aacaattctc accggcaatt tgaatgtaaa gttggagact ttaagcatga atttggtgaa
     1021 ttaaagcgaa gcaccgagca tttgttttct aataaagctt caatcctcag tagggatctg
     1081 gaacgaacag ttaaggagca tgaacatcat attaatgagc agaaaagtat aatgcaagca
     1141 ttgagtaaag atgttggctt ggtgaagaaa cttgtggacg attgtttgac cagtcaactc
     1201 tccagttctc tccgtcctca cgatgctgtg tcagcattag gtcccatgta cgagggccac
     1261 gacaaaagtt atcttcctaa aatgcaatca tgtgagcacg cggtttccaa cctactcgtt
     1321 ttctgcaaaa acaagaagtc ggaaatgaac aattttgttc acaagtacat gcaaaagatt
     1381 gcatacattc agtacaccat caaagaagta aggtacaagt tttcagtttt caccgaagca
     1441 ctaaaacgcc agaatgatca gtttgagcag ttgaaagtga ttcgtggcat cgggcccgca
     1501 tatagagcgt gtcttgctga gatagtgcgg agaaaagcgt caatgaaact ttatatgggc
     1561 atggctggac aattagccga aagacttgcg actaaacggg aatcagaaat aagaagaaga
     1621 gaagaatttc ttaaagtcaa cagttcgttt ataccgagag acgttttagc atcgatgggg
     1681 ttatatgata ctccaagcac atgtgatgtc aatgtagctc catttgatac taatttactc
     1741 gatatcgata tatcagattt ggaccgtttt gcccctgagc atttgttagg actttctttg
     1801 aaaaaaagtt cgtcttcaat gtctcaagat gctgaaataa gttctgaaag tggtaccgaa
     1861 acttataatg attttatcga gggttctgaa ctggtcgaga ttgcggggac tagcaaactt
     1921 gaagtcgaaa acgcaaagtt aaaagccgaa cttgcgtctg caatagctat gctttgtact
     1981 ttttcacctg aagttgattt tgaagatggt gaagttggaa atatgctaaa aaactcagct
     2041 gaaaaaactg ctgaggcgtt gcatttgaaa gatgaacacg agaagcattt gttgaatatg
     2101 ttgaaagtca aacatatgca gtgtgaatcg tatgagaaac gaataaaaga gcttgaaaat
     2161 aggttgtcgg atcagtattc tatagaaccc aaacttaata aagatgagtc aactcggttc
     2221 acatcatccg agccaatgga tgagacttct tatgcttcaa gctcgttact tttaaaatcg
     2281 ggatgtaatg attcttctgg aacaacaaat gtacatctgg actcatcgat ggtggagccc
     2341 aaccgagatg aaaaagacga taaggagacg gtggtggcgg atgtggggat ggtgttagcc
     2401 acgagttcaa ctggtgatta catgccgcca cctatgaaaa gtttgacttg tgatgaacag
     2461 gtcaaagcta gtggtgatct tgtggtggag ttgcagaact tacttgctga aaaatcaaat
     2521 cagctacatg atacggaaac taagctccaa gctgcaatgg aggaggttac aaggttgagc
     2581 ggtgagctgg aaattagtcg gaatcttcta gatgaatctc agatgaattg tgctcactta
     2641 gagaactgtc tacatgaagc aagagaagag gctcaaactc atctttgtgc agccgatcgt
     2701 cgggcatccg aatataccgc gttgcgggcc tctgctgtca aaatccgcag tctcttcgaa
     2761 aggctaaaaa cgtgcgtttc ttcagccggc gtggccggtt tttcagagtc tcttcgctcg
     2821 ttagctcaat ctcttgccaa ttctgctaat gagaatgggg atgatggcac tgccgagttc
     2881 cgtgaatgtg ttcgtgtgct tgccgagaag gttggtgttt tgacgagaca acgatctgag
     2941 ctaatcgata ggtacacaaa ggcggagaca tcacatgagc atcttacaaa ggagttggaa
     3001 gaaaagaaag aattggtcaa cactttgtac accaagcttc aatccgaaaa acaggtgaac
     3061 aaggagaaga tatcattcgg tcgtttggag cttcatgaga tagctgcatt tgtacttaac
     3121 gtagctggac actacgaggc catcaaccga aactgcagtc attactatct ttcttcagag
     3181 tcggtttcct tatttgctga ccaccttcca catcgcccga cctatattgt aggccaaatt
     3241 gtgcatatcg aaagacaaac tgtgaaatca tctccggttc tagccgaacg tgccaccacc
     3301 acctcctcgg gccagggtca gggccaattt catttgaatt caggtacaaa tccgtatggt
     3361 ctatctgcgg ggagcgagta ttttgtggtg acagtagcca tattacctga taacgccatt
     3421 cattcaccca ctgctgctgc ttcctgatcg tgaaaactcg gtaagatatg atggaagaac
     3481 taaaaaaaca gctgggacaa gtgtatatag ttgacataat gaaaagaaaa aaaaatactg
     3541 ttgatttaaa tttaattcca ctttcatgta cagttgatga tgatcataat ctttatgctt
     3601 agttgtatat attaaatctc ccttgatcat gtaaaataac cctacataaa atcgttttaa
     3661 ttgaaccgtt atctgttgat gaaattgtg
//
LOCUS       XM_071886064            3298 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides autophagy-related protein 11
            (LOC139904129), transcript variant X4, mRNA.
ACCESSION   XM_071886064
VERSION     XM_071886064.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3298
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3298
                     /gene="LOC139904129"
                     /note="autophagy-related protein 11; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904129"
     CDS             309..3170
                     /gene="LOC139904129"
                     /codon_start=1
                     /product="autophagy-related protein 11 isoform X2"
                     /protein_id="XP_071742165.1"
                     /db_xref="GeneID:139904129"
                     /translation="MSSSENVIQRGKLLVHIAENGHSFELDCDEDTLVVSVQRYLESL
                     SGIRLTDQLLLYLDLKLEPQSPLSTYKLPSDDREVFVFNKSKMRSNSAPPGPEEEFEL
                     SENIYVDPPQPTSSLDPHPLDEAPDPALKALPSYERQFRYHYQLGDAIYRRTLMKYNA
                     CEKLAREQRVQEKALEIARGNLDHFYKMINQNYMDFVKCYSQQQRTHSNLLVNFGRDL
                     ERLKSIKLLPFLQTADRKCLLDFVKEDNLRKMVDDCNNSHRQFECKVGDFKHEFGELK
                     RSTEHLFSNKASILSRDLERTVKEHEHHINEQKSIMQALSKDVGLVKKLVDDCLTSQL
                     SSSLRPHDAVSALGPMYEGHDKSYLPKMQSCEHAVSNLLVFCKNKKSEMNNFVHKYMQ
                     KIAYIQYTIKEVRYKFSVFTEALKRQNDQFEQLKVIRGIGPAYRACLAEIVRRKASMK
                     LYMGMAGQLAERLATKRESEIRRREEFLKVNSSFIPRDVLASMGLYDTPSTCDVNVAP
                     FDTNLLDIDISDLDRFAPEHLLGLSLKKSSSSMSQDAEISSESGTETYNDFIEGSELV
                     EIAGTSKLEVENAKLKAELASAIAMLCTFSPEVDFEDGEVGNMLKNSAEKTAEALHLK
                     DEHEKHLLNMLKVKHMQCESYEKRIKELENRLSDQYSIEPKLNKDESTRFTSSEPMDE
                     TSYASSSLLLKSGCNDSSGTTNVHLDSSMVEPNRDEKDDKETVVADVGMVLATSSTGD
                     YMPPPMKSLTCDEQVKASGDLVVELQNLLAEKSNQLHDTETKLQAAMEEVTRLSGELE
                     ISRNLLDESQMNCAHLENCLHEAREEAQTHLCAADRRASEYTALRASAVKIRSLFERL
                     KTCVSSAGVAGFSESLRSLAQSLANSANENGDDGTAEFRECVRVLAEKVGVLTRQRSE
                     LIDRYTKAETSHEHLTKELEEKKELVNTLYTKLQSEKQI"
     misc_feature    789..1763
                     /gene="LOC139904129"
                     /note="Autophagy protein ATG17-like domain; Region:
                     ATG17_like; pfam04108"
                     /db_xref="CDD:427715"
     misc_feature    <2562..>3164
                     /gene="LOC139904129"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      
        1 ggaatttaac agtaaaaaaa cacccacaaa atttcacaaa aatcatcaaa gagaaaaatt
       61 ctgttgtttt tgttccaaaa tactgaaatt gtggaacagg aacagaacta caagtataaa
      121 aagaaggaag ttcttttttt tattcatctt cttgtgatgt gccttgtggt ttactcatct
      181 gatataagat taaggtgatg gtgaaaaggt agctggattg atcaaatcgg ttgagggtaa
      241 attggtcttc ttttgctgtt tttatctcca tctttgtaat attattaggt tttttagggt
      301 tcgaaaagat gagttcaagt gaaaatgtga tacaaagggg taagctttta gttcatatag
      361 ccgagaacgg tcattcgttt gagcttgatt gtgacgaaga tacccttgtt gtatcagttc
      421 aacgatattt agaatcgctt tctggaattc ggttaaccga tcagcttctt ttgtatttgg
      481 atttgaaatt agaacctcaa agtccactct ctacgtataa actcccatcc gatgatcgag
      541 aggtttttgt tttcaataaa tccaaaatgc gaagcaattc ggccccacct ggacccgaag
      601 aagaatttga gttatctgaa aatatctatg tagacccacc tcagcctact tcatctcttg
      661 atccacatcc attagatgaa gccccggacc ccgctttaaa ggcattaccg tcatacgaac
      721 gacagtttag gtaccattat cagctcgggg acgctattta ccgacgcaca cttatgaaat
      781 acaacgcctg tgaaaaactt gcaagagagc aaagggtgca agagaaggca ctggaaattg
      841 ctaggggtaa tttggaccat ttctataaga tgatcaatca gaactacatg gatttcgtca
      901 agtgttattc acagcagcaa aggacacatt cgaatctttt agtgaatttc ggtcgtgatt
      961 tagagcgact aaagtctatc aaacttctac cgtttttaca aactgctgat cgcaagtgtt
     1021 tactggattt tgtgaaagaa gataatttaa gaaaaatggt ggatgattgc aacaattctc
     1081 accggcaatt tgaatgtaaa gttggagact ttaagcatga atttggtgaa ttaaagcgaa
     1141 gcaccgagca tttgttttct aataaagctt caatcctcag tagggatctg gaacgaacag
     1201 ttaaggagca tgaacatcat attaatgagc agaaaagtat aatgcaagca ttgagtaaag
     1261 atgttggctt ggtgaagaaa cttgtggacg attgtttgac cagtcaactc tccagttctc
     1321 tccgtcctca cgatgctgtg tcagcattag gtcccatgta cgagggccac gacaaaagtt
     1381 atcttcctaa aatgcaatca tgtgagcacg cggtttccaa cctactcgtt ttctgcaaaa
     1441 acaagaagtc ggaaatgaac aattttgttc acaagtacat gcaaaagatt gcatacattc
     1501 agtacaccat caaagaagta aggtacaagt tttcagtttt caccgaagca ctaaaacgcc
     1561 agaatgatca gtttgagcag ttgaaagtga ttcgtggcat cgggcccgca tatagagcgt
     1621 gtcttgctga gatagtgcgg agaaaagcgt caatgaaact ttatatgggc atggctggac
     1681 aattagccga aagacttgcg actaaacggg aatcagaaat aagaagaaga gaagaatttc
     1741 ttaaagtcaa cagttcgttt ataccgagag acgttttagc atcgatgggg ttatatgata
     1801 ctccaagcac atgtgatgtc aatgtagctc catttgatac taatttactc gatatcgata
     1861 tatcagattt ggaccgtttt gcccctgagc atttgttagg actttctttg aaaaaaagtt
     1921 cgtcttcaat gtctcaagat gctgaaataa gttctgaaag tggtaccgaa acttataatg
     1981 attttatcga gggttctgaa ctggtcgaga ttgcggggac tagcaaactt gaagtcgaaa
     2041 acgcaaagtt aaaagccgaa cttgcgtctg caatagctat gctttgtact ttttcacctg
     2101 aagttgattt tgaagatggt gaagttggaa atatgctaaa aaactcagct gaaaaaactg
     2161 ctgaggcgtt gcatttgaaa gatgaacacg agaagcattt gttgaatatg ttgaaagtca
     2221 aacatatgca gtgtgaatcg tatgagaaac gaataaaaga gcttgaaaat aggttgtcgg
     2281 atcagtattc tatagaaccc aaacttaata aagatgagtc aactcggttc acatcatccg
     2341 agccaatgga tgagacttct tatgcttcaa gctcgttact tttaaaatcg ggatgtaatg
     2401 attcttctgg aacaacaaat gtacatctgg actcatcgat ggtggagccc aaccgagatg
     2461 aaaaagacga taaggagacg gtggtggcgg atgtggggat ggtgttagcc acgagttcaa
     2521 ctggtgatta catgccgcca cctatgaaaa gtttgacttg tgatgaacag gtcaaagcta
     2581 gtggtgatct tgtggtggag ttgcagaact tacttgctga aaaatcaaat cagctacatg
     2641 atacggaaac taagctccaa gctgcaatgg aggaggttac aaggttgagc ggtgagctgg
     2701 aaattagtcg gaatcttcta gatgaatctc agatgaattg tgctcactta gagaactgtc
     2761 tacatgaagc aagagaagag gctcaaactc atctttgtgc agccgatcgt cgggcatccg
     2821 aatataccgc gttgcgggcc tctgctgtca aaatccgcag tctcttcgaa aggctaaaaa
     2881 cgtgcgtttc ttcagccggc gtggccggtt tttcagagtc tcttcgctcg ttagctcaat
     2941 ctcttgccaa ttctgctaat gagaatgggg atgatggcac tgccgagttc cgtgaatgtg
     3001 ttcgtgtgct tgccgagaag gttggtgttt tgacgagaca acgatctgag ctaatcgata
     3061 ggtacacaaa ggcggagaca tcacatgagc atcttacaaa ggagttggaa gaaaagaaag
     3121 aattggtcaa cactttgtac accaagcttc aatccgaaaa acagatataa aaacaaacag
     3181 tattcagcat acagaccttc aaaccacaac ttctttacat ggtccgcaga tcttcagaca
     3241 aaaacatctt aaaaaacaaa cagcagctaa atgaaggttt gacttgttga cctaattt
//
LOCUS       XM_071886066            3411 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA-directed RNA polymerase
            3, chloroplastic-like (LOC139904130), mRNA.
ACCESSION   XM_071886066
VERSION     XM_071886066.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3411
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3411
                     /gene="LOC139904130"
                     /note="DNA-directed RNA polymerase 3, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 23 Proteins"
                     /db_xref="GeneID:139904130"
     CDS             57..3002
                     /gene="LOC139904130"
                     /codon_start=1
                     /product="DNA-directed RNA polymerase 3,
                     chloroplastic-like"
                     /protein_id="XP_071742167.1"
                     /db_xref="GeneID:139904130"
                     /translation="MASSAIFSPSPRGDLQSPWSTNKVKPRKPHKPTTHLQIFKNPSQ
                     NPLIYSSSFPHNLKLPSLKDPIASTHSHPLPDSVDENFTKNLENFATLQRITHGFDSV
                     SNSEMNLKRIYIQEPPWITSLLMKNFYKSSGVKKRVKVEIDKRNYYILRRRQIKAETE
                     AWEKMTEEYREFQREMCEKKLAPNLPYVKSLFAGWFEPLTKAIEKEQKSPNTKKHQEA
                     YAPYIDSLPADKMAVIVMHKMMGLLMMGHDYRYVRVVQAAIQIGMAVEFEVRIQTFLE
                     KTKSCPKKKVLIQAQQEVTKENEMLRKRVKTLIKRKRIMEVQKILKDEEYIPWGRDKQ
                     AKLGCRLIELLTDVAYVQSPVSQSADAPPDIRPAFRHIFKIIAMESGQIRKCGVIECD
                     KSILTGLERTARHMIIPYVPMLVPPRKWKGYDSGGHFFLPSYLMRTHGSKQQQEAVKN
                     VQATQMQKIYEALDTLGHTKWRINKRLLNVVESIWAAGGDIAGLVNREDVSVPDLNSD
                     DLSEIKEWRWSVRKAKKLNQELHSQRCDIELKLSVARRMKDEEGFYYPHNLDFRGRAY
                     PMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLRIHLANLYGSGVEKLSYDGRLQFV
                     ENNLRNIIDSADNPLGGNRWWLTAEDPFQCLATCINLSETLKSSSPHTVISHLPVHQD
                     GSCNGLQHYAALGRDTLEAAAVNLVAGEKPCDVYSEIAARVHDIMQRDSEKDSTTYPN
                     ALLARLLIGQVNRKLVKQTVMTSVYGVTFIGAREQIKRRLQEKGHITDDQLLFSASCY
                     AAKVTLEALGEIFEAARGTMCWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTKRHI
                     IKTSLQVLALQREGSTVEVKKQKTAFPPNFVHSLDGTHMMMTAIACRDAGLRFAGVHD
                     SFWTHACDVDRMNVILREKFVELYNTPILENLLESFQTTYPGLEFPPLPERGDFDLNE
                     VLKSPYFFN"
     misc_feature    504..2996
                     /gene="LOC139904130"
                     /note="T3/T7-like RNA polymerase; Region: PHA00452"
                     /db_xref="CDD:222797"
     misc_feature    1824..2999
                     /gene="LOC139904130"
                     /note="DNA-dependent RNA polymerase; Region: RNA_pol;
                     pfam00940"
                     /db_xref="CDD:460006"
     polyA_site      3411
                     /gene="LOC139904130"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcatttcaa cccccttatc cacccaccac ccacacctat taaaccagga gcaaacatgg
       61 cttcatctgc tatcttttcc ccaagcccta gaggtgacct tcaatcacca tggtcaacca
      121 ataaagtcaa accgagaaaa ccacacaaac ccactaccca tcttcaaatc tttaaaaacc
      181 catcacaaaa cccattaatt tattcatctt ctttccctca taacctaaag ttaccatctt
      241 taaaagaccc aattgcatcc acacattccc acccactacc tgactccgtt gatgaaaatt
      301 tcaccaagaa tcttgaaaat tttgcaactt tacaaagaat cacacatggg tttgattcgg
      361 tgtccaattc agagatgaac ctaaaaagga tttatattca agaaccacct tggattactt
      421 ctcttttgat gaagaatttc tataaaagca gtggtgtgaa gaaaagggta aaagtggaaa
      481 ttgataaaag aaactattat attttgagga ggagacaaat taaagcagag actgaagctt
      541 gggagaagat gactgaagaa tacagggagt ttcaaaggga aatgtgtgag aagaaattgg
      601 cacctaattt gccttatgtc aagtcattgt ttgctggttg gtttgagcca ctgactaaag
      661 caattgaaaa ggagcaaaaa tcgcccaata cgaaaaagca tcaagaggca tatgcccctt
      721 atattgattc attaccagct gataaaatgg ctgttatagt aatgcataag atgatgggac
      781 tgttgatgat gggccatgat tatcggtatg ttcgagtcgt tcaagctgct attcaaattg
      841 gaatggcagt tgagtttgag gttagaatac agactttttt ggagaagacc aaaagttgtc
      901 caaaaaagaa ggttttaatt caagctcaac aagaagtgac taaagaaaat gagatgctta
      961 ggaaacgtgt taaaactttg atcaaaagga aaagaataat ggaagtgcag aagattttaa
     1021 aagacgaaga gtatatacct tggggcagag ataagcaagc aaagctagga tgccgtctta
     1081 ttgagttatt aacagacgta gcttatgttc aatctccagt tagtcagtca gctgatgccc
     1141 cacctgacat tcgcccagca tttcgtcata ttttcaagat tatagctatg gaatcgggtc
     1201 agatcagaaa atgtggagtt attgaatgtg ataaatcgat cctcactggc cttgaaagaa
     1261 ctgctcgaca catgataatc ccttatgttc caatgctagt gcctccaaga aaatggaaag
     1321 ggtatgacag tggaggacac tttttcttac cttcatatct catgcgcact catggatcaa
     1381 aacagcaaca agaggctgtt aagaatgtcc aagctacaca aatgcagaaa atttatgagg
     1441 cattagatac acttggacac acaaaatgga gaataaataa aaggctactt aacgtagttg
     1501 aaagcatctg ggctgcaggt ggtgatattg ctggccttgt taatcgtgaa gatgtttctg
     1561 ttcctgattt gaattcagac gacttaagtg aaataaaaga atggagatgg agtgtgcgaa
     1621 aagcaaagaa actcaaccaa gaattacact ctcaacgatg tgatatcgaa ctaaagcttt
     1681 cggtagctcg aaggatgaaa gatgaagaag ggttctacta tcctcataat ctcgactttc
     1741 gaggccgtgc ttatcccatg cacccacatt taaatcattt gagttccgat ttatgtcgtg
     1801 gaattctcga gtttgccgaa gggaggccgt tagggaagtc cggtttacgt tggttgagaa
     1861 tacatttagc aaatctttat ggttctggag ttgagaagct ttcatatgat ggccggttac
     1921 agtttgtgga aaataatttg agaaatatta tagattcggc cgataatcca cttggtggaa
     1981 atcggtggtg gctaacagct gaggacccgt ttcagtgttt agccacttgt atcaatttgt
     2041 cagaaacact aaaaagttca tcccctcata ctgttatttc tcatctgcca gttcatcagg
     2101 atggttcatg caatggcctt cagcactatg ctgcattggg acgagacact ttagaagctg
     2161 ctgcagtgaa cttagttgct ggggagaaac cttgtgatgt ttactcggag atagccgcac
     2221 gggttcatga tatcatgcag cgggacagtg aaaaagattc aacaacctac ccaaatgcct
     2281 tattagccag gctcttaatc ggccaggtca accgaaagct agtcaaacaa acagtaatga
     2341 cttctgtgta cggtgttaca tttatcgggg cacgagaaca aataaaaaga agactacaag
     2401 agaagggcca tattactgat gaccaactac tgtttagtgc atcttgttat gctgctaaag
     2461 ttacattgga ggctcttggg gagatatttg aagcggcacg tggtaccatg tgctggcttg
     2521 gtgattgcgc aaaggtgatt gcttctgaaa atcagcctgt tcggtggaca actcctctag
     2581 gacttcctgt tgtacaaccc tattttaaaa ctaaacgaca tatcataaaa acctcacttc
     2641 aggtcttggc tttacaacgg gagggtagca cggtcgaggt caaaaagcag aaaacggcat
     2701 ttcctccaaa ttttgtgcac tcgcttgacg gtacacacat gatgatgact gccattgctt
     2761 gcagggatgc tggattgcgc tttgcagggg ttcatgattc attctggacg catgcatgtg
     2821 acgtcgacag gatgaatgta atactacgag aaaaatttgt agagctctat aacacgccta
     2881 tacttgaaaa tttgcttgaa agctttcaaa cgacatatcc agggctcgag ttccctcctt
     2941 tgccagagag aggtgacttt gaccttaacg aagtcctgaa atcaccctac tttttcaact
     3001 gaacgcttct cctaatctgt atcatataga caccaccgct ttacataggc atcaatatgt
     3061 gtagaacaac gattagggtc taagaataga gattctaaga cgttctcaag acgatgcaca
     3121 caggattgag ttcgtcgaaa agatgaggca cagcaaggta caaaaacgga attgtggtat
     3181 ttttgtagaa gtgttgtgaa tgatcagaga gcagggttag cgttggtaat gaagcatcgt
     3241 acattttttt ttttttatac gaatggaggt gggctgacca tgggatgttg tggagtacgt
     3301 gagcttcgcg cacgcattag ttatttaggt tgtttctctg taaatgtaat attttgtaat
     3361 gaacgttttc gttgaagatc agatgaatac aatcggtata ttttactgta a
//
LOCUS       XM_071886067             904 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904131), mRNA.
ACCESSION   XM_071886067
VERSION     XM_071886067.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..904
                     /gene="LOC139904131"
                     /note="uncharacterized LOC139904131; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904131"
     CDS             128..862
                     /gene="LOC139904131"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742168.1"
                     /db_xref="GeneID:139904131"
                     /translation="MMNTYDYDIIDTVKAEKANAIARYRRYTNITKLIRLLEVFVAIS
                     FISWTSTRIPTLFKFSGEYLFEFSSYLMNQHVVFLFGNVIIIACYVLSGYSESGTDSA
                     GSYGVHSDNALTIRKPTESLSEVQNRIISIPNPVNEKLIKKVESESESECTAVFPAIK
                     QAAKQIKRFQRTQSELKSKISVRPHRQLRRSVTEMKRSGTVSVGESAAPVKVVDRMSN
                     EEFKIAVEAFILKQQKFLKQQSMVED"
ORIGIN      
        1 cacacttcac tatttcactc tgttacttct tccaatcacc aatttcatca caaattcaca
       61 atacaaaaca cacactattc acactccatc cattagtatt taaatcatac ttaatttctc
      121 cagtaaaatg atgaatactt atgattatga tattatcgac acagtgaaag ccgaaaaggc
      181 aaatgcgatt gcacgataca gacggtacac gaatataacg aaattgattc gattactcga
      241 agttttcgtt gctatttcgt ttatttcatg gacgtcaact cgaattccga ctctgtttaa
      301 attctccgga gagtatctgt tcgaattttc gtcttacttg atgaatcaac atgttgtgtt
      361 tctctttgga aatgtaatta tcatcgcttg ttacgtgcta tctggttact cggaatccgg
      421 taccgattcc gccggaagtt atggagttca ctccgataac gctttaacta tccggaaacc
      481 gacggaatcg ttatcggagg ttcaaaatcg aatcatatcg attccgaatc ctgttaatga
      541 aaagttgatt aaaaaagtgg aatcggaatc ggaatcggaa tgtacggcgg tttttccggc
      601 gattaagcaa gcggcgaagc aaataaagag gtttcaaaga acgcaatcgg aattgaagag
      661 taagatatcg gtgaggcctc atcgtcagtt acggcgatcg gtgacggaga tgaaaaggag
      721 cgggacggtt agcgttggag aatcagcggc gccggtgaaa gtggttgaca gaatgagtaa
      781 tgaagaattt aaaattgctg ttgaggcttt tattttaaaa cagcaaaagt ttcttaagca
      841 acagagtatg gttgaagatt aatgtagatg atagtaataa ttgaatccaa aatttgaaat
      901 taca
//
LOCUS       XM_071886068            2065 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic translation
            initiation factor-like (LOC139904132), transcript variant X1, mRNA.
ACCESSION   XM_071886068
VERSION     XM_071886068.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2065
                     /gene="LOC139904132"
                     /note="eukaryotic translation initiation factor-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139904132"
     CDS             166..2058
                     /gene="LOC139904132"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor-like
                     isoform X1"
                     /protein_id="XP_071742169.1"
                     /db_xref="GeneID:139904132"
                     /translation="METEVYGETQNCAKSEGTLQVLAPPLEPDNHDWRGLPPPIEERS
                     CDANRDNRDFSRFDSTQEHNSHYARPQASPNQRAGGPAPALVKAKVPFRRRTLSDRDR
                     VFMTVKDNLDKLTLKKFDILKGQHFISRITTADILAGVVSLIFNKAVLEPIYCPMYAQ
                     LCSDLNKNLPPFRSDEPDRMEITFKRVLLNRCQEAFEGADQLRAEIRQMTAPEQDYER
                     MFKERIINLQTLGNIRLIGELFKQKMVTEKTVHHIIQELLETDSKICPEEENVKAICH
                     FFNTIGKQLDEGPKSRRINDLYFNRLNKLSTNQQLAPHMRFMVRDLIDLRSNNWIPRR
                     EELQVPVQPQERYSMSDNRDWHGRPPIVEDITGGPAPALVKAKVPWSVHRGTLSDKDR
                     VLKTVNGILSKLIPEKFDLLKGQLMDPGITPADILKGVISSIFDKAVLEPTFCPMYAQ
                     LCSDLNNNLPPFPSDEPDGKEITFKRLLLNNCREAFEGANQLRAEIRQMTAPEQDAER
                     KDKERMINLRTLGNIRLIGELSNQKLVPEKIIHYIIEELLGTEPMEENAEAICLFLNI
                     IGKQLDEGPNSRRINNLYFNRLKALSTNQHLAPCTRLMIRDVIDLRSRKWIPRWEKVL
                     FYNNLY"
     misc_feature    484..1152
                     /gene="LOC139904132"
                     /note="MIF4G domain; Region: MIF4G; pfam02854"
                     /db_xref="CDD:397130"
     misc_feature    1345..2010
                     /gene="LOC139904132"
                     /note="MIF4G domain; Region: MIF4G; pfam02854"
                     /db_xref="CDD:397130"
ORIGIN      
        1 aattaaaaag gtatcaagac ttaaggtatg cagggtgatc aaaaaagtgt cccacgttga
       61 gtttggttca tctgatcgag cttcgtgagc gtgttgatta tactagaata cagaccaact
      121 taaggaggtt gtctacatcc ctgaggagag aaagtcaaac tagaaatgga gactgaggtt
      181 tatggcgaga cccagaattg cgctaaatct gaaggaactc tgcaggtgct agctccgcct
      241 ctagagcctg ataaccatga ttggcgtgga ctacctcctc ccatcgagga gaggtcttgt
      301 gatgcaaatc gtgacaatcg tgatttcagc aggttcgata gtacgcaaga acataattca
      361 cattatgcta gaccacaagc ctctcctaac caaagggcgg gtgggcctgc tcctgctctt
      421 gtcaaagcta aggtcccatt tcgtaggagg actctctctg atagggatcg tgtcttcatg
      481 actgttaaag ataatctgga caagttgact ctgaaaaagt ttgatattct caagggtcaa
      541 catttcattt cgaggattac tacagctgat atcttagcgg gggttgtttc gttgatattt
      601 aacaaggctg ttctcgagcc tatatattgt cctatgtacg cgcaactatg ttcagatctt
      661 aataaaaatc tcccaccgtt tcgatcggat gaacctgaca gaatggagat cacattcaaa
      721 cgcgtgctat tgaatcgttg ccaagaggct tttgaaggtg ccgaccagct gagggcagaa
      781 ataaggcaga tgactgcccc tgaacaagat tatgaacgca tgtttaaaga aagaatcatt
      841 aaccttcaga ctcttggaaa catacgttta attggtgaac ttttcaagca aaaaatggtt
      901 accgaaaaga ccgttcatca catcatacag gagcttttgg agacagacag taaaatatgt
      961 ccagaggaag aaaatgtgaa ggcaatatgt cattttttta acaccattgg gaaacaactt
     1021 gacgaaggcc caaagtcgag acgaattaac gatctttact ttaaccgact caataagcta
     1081 tcgacaaatc aacagttggc tccacatatg aggttcatgg ttcgtgatct tattgatcta
     1141 agatcaaata actggattcc aaggagggaa gagttgcagg tgccagttca gcctcaggaa
     1201 cgctactcta tgtccgataa tcgtgattgg catggaagac ctcctatcgt tgaggatatc
     1261 acgggtgggc ctgctcccgc tcttgtcaaa gctaaggtcc catggtcagt tcataggggg
     1321 actctttctg acaaggatcg tgtcttgaag acagttaatg gtattctgag caagttgatt
     1381 ccggaaaagt ttgatcttct caagggtcaa cttatggacc cggggattac accagctgat
     1441 attttaaagg gggttatctc gtcgatattt gacaaggctg ttcttgagcc tacattttgt
     1501 cctatgtatg ctcaactttg ttcagatctt aataacaatc tcccgccgtt tccatcggat
     1561 gaacctgacg gaaaggagat cacatttaaa cgattgttat tgaataattg ccgagaggct
     1621 tttgaaggtg ccaaccagtt gagggcagaa ataaggcaga tgactgcccc tgagcaagat
     1681 gctgaacgta aggacaaaga aagaatgatt aatcttcgaa ctcttggaaa cattcgttta
     1741 attggtgaac tttcaaacca gaaattagtt ccagaaaaga tcattcatta catcatagag
     1801 gaacttttgg ggaccgaacc tatggaagaa aatgcggagg caatttgtct ttttttaaac
     1861 atcattggca aacaacttga cgagggccca aactcgagac gaattaacaa tctctacttt
     1921 aatcgactca aggcactatc aacaaaccaa catttggctc cgtgtacaag gttaatgatt
     1981 cgtgacgtta ttgatctaag atcacgtaag tggattccaa ggtgggaaaa agtacttttt
     2041 tataataatc tatattagtg accac
//
LOCUS       XM_071886069            2059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic translation
            initiation factor-like (LOC139904132), transcript variant X2, mRNA.
ACCESSION   XM_071886069
VERSION     XM_071886069.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2059
                     /gene="LOC139904132"
                     /note="eukaryotic translation initiation factor-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139904132"
     CDS             166..2052
                     /gene="LOC139904132"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor-like
                     isoform X2"
                     /protein_id="XP_071742170.1"
                     /db_xref="GeneID:139904132"
                     /translation="METEVYGETQNCAKSEGTVLAPPLEPDNHDWRGLPPPIEERSCD
                     ANRDNRDFSRFDSTQEHNSHYARPQASPNQRAGGPAPALVKAKVPFRRRTLSDRDRVF
                     MTVKDNLDKLTLKKFDILKGQHFISRITTADILAGVVSLIFNKAVLEPIYCPMYAQLC
                     SDLNKNLPPFRSDEPDRMEITFKRVLLNRCQEAFEGADQLRAEIRQMTAPEQDYERMF
                     KERIINLQTLGNIRLIGELFKQKMVTEKTVHHIIQELLETDSKICPEEENVKAICHFF
                     NTIGKQLDEGPKSRRINDLYFNRLNKLSTNQQLAPHMRFMVRDLIDLRSNNWIPRREE
                     LQVPVQPQERYSMSDNRDWHGRPPIVEDITGGPAPALVKAKVPWSVHRGTLSDKDRVL
                     KTVNGILSKLIPEKFDLLKGQLMDPGITPADILKGVISSIFDKAVLEPTFCPMYAQLC
                     SDLNNNLPPFPSDEPDGKEITFKRLLLNNCREAFEGANQLRAEIRQMTAPEQDAERKD
                     KERMINLRTLGNIRLIGELSNQKLVPEKIIHYIIEELLGTEPMEENAEAICLFLNIIG
                     KQLDEGPNSRRINNLYFNRLKALSTNQHLAPCTRLMIRDVIDLRSRKWIPRWEKVLFY
                     NNLY"
     misc_feature    478..1146
                     /gene="LOC139904132"
                     /note="MIF4G domain; Region: MIF4G; pfam02854"
                     /db_xref="CDD:397130"
     misc_feature    1339..2004
                     /gene="LOC139904132"
                     /note="MIF4G domain; Region: MIF4G; pfam02854"
                     /db_xref="CDD:397130"
ORIGIN      
        1 aattaaaaag gtatcaagac ttaaggtatg cagggtgatc aaaaaagtgt cccacgttga
       61 gtttggttca tctgatcgag cttcgtgagc gtgttgatta tactagaata cagaccaact
      121 taaggaggtt gtctacatcc ctgaggagag aaagtcaaac tagaaatgga gactgaggtt
      181 tatggcgaga cccagaattg cgctaaatct gaaggaactg tgctagctcc gcctctagag
      241 cctgataacc atgattggcg tggactacct cctcccatcg aggagaggtc ttgtgatgca
      301 aatcgtgaca atcgtgattt cagcaggttc gatagtacgc aagaacataa ttcacattat
      361 gctagaccac aagcctctcc taaccaaagg gcgggtgggc ctgctcctgc tcttgtcaaa
      421 gctaaggtcc catttcgtag gaggactctc tctgataggg atcgtgtctt catgactgtt
      481 aaagataatc tggacaagtt gactctgaaa aagtttgata ttctcaaggg tcaacatttc
      541 atttcgagga ttactacagc tgatatctta gcgggggttg tttcgttgat atttaacaag
      601 gctgttctcg agcctatata ttgtcctatg tacgcgcaac tatgttcaga tcttaataaa
      661 aatctcccac cgtttcgatc ggatgaacct gacagaatgg agatcacatt caaacgcgtg
      721 ctattgaatc gttgccaaga ggcttttgaa ggtgccgacc agctgagggc agaaataagg
      781 cagatgactg cccctgaaca agattatgaa cgcatgttta aagaaagaat cattaacctt
      841 cagactcttg gaaacatacg tttaattggt gaacttttca agcaaaaaat ggttaccgaa
      901 aagaccgttc atcacatcat acaggagctt ttggagacag acagtaaaat atgtccagag
      961 gaagaaaatg tgaaggcaat atgtcatttt tttaacacca ttgggaaaca acttgacgaa
     1021 ggcccaaagt cgagacgaat taacgatctt tactttaacc gactcaataa gctatcgaca
     1081 aatcaacagt tggctccaca tatgaggttc atggttcgtg atcttattga tctaagatca
     1141 aataactgga ttccaaggag ggaagagttg caggtgccag ttcagcctca ggaacgctac
     1201 tctatgtccg ataatcgtga ttggcatgga agacctccta tcgttgagga tatcacgggt
     1261 gggcctgctc ccgctcttgt caaagctaag gtcccatggt cagttcatag ggggactctt
     1321 tctgacaagg atcgtgtctt gaagacagtt aatggtattc tgagcaagtt gattccggaa
     1381 aagtttgatc ttctcaaggg tcaacttatg gacccgggga ttacaccagc tgatatttta
     1441 aagggggtta tctcgtcgat atttgacaag gctgttcttg agcctacatt ttgtcctatg
     1501 tatgctcaac tttgttcaga tcttaataac aatctcccgc cgtttccatc ggatgaacct
     1561 gacggaaagg agatcacatt taaacgattg ttattgaata attgccgaga ggcttttgaa
     1621 ggtgccaacc agttgagggc agaaataagg cagatgactg cccctgagca agatgctgaa
     1681 cgtaaggaca aagaaagaat gattaatctt cgaactcttg gaaacattcg tttaattggt
     1741 gaactttcaa accagaaatt agttccagaa aagatcattc attacatcat agaggaactt
     1801 ttggggaccg aacctatgga agaaaatgcg gaggcaattt gtcttttttt aaacatcatt
     1861 ggcaaacaac ttgacgaggg cccaaactcg agacgaatta acaatctcta ctttaatcga
     1921 ctcaaggcac tatcaacaaa ccaacatttg gctccgtgta caaggttaat gattcgtgac
     1981 gttattgatc taagatcacg taagtggatt ccaaggtggg aaaaagtact tttttataat
     2041 aatctatatt agtgaccac
//
LOCUS       XM_071886070            2059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic translation
            initiation factor-like (LOC139904132), transcript variant X3, mRNA.
ACCESSION   XM_071886070
VERSION     XM_071886070.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2059
                     /gene="LOC139904132"
                     /note="eukaryotic translation initiation factor-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139904132"
     CDS             166..2052
                     /gene="LOC139904132"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor-like
                     isoform X3"
                     /protein_id="XP_071742171.1"
                     /db_xref="GeneID:139904132"
                     /translation="METEVYGETQNCAKSEGTLQVLAPPLEPDNHDWRGLPPPIEERS
                     CDANRDNRDFSRFDSTQEHNSHYARPQASPNQRAGGPAPALVKAKVPFRRRTLSDRDR
                     VFMTVKDNLDKLTLKKFDILKGQHFISRITTADILAGVVSLIFNKAVLEPIYCPMYAQ
                     LCSDLNKNLPPFRSDEPDRMEITFKRVLLNRCQEAFEGADQLRAEIRQMTAPEQDYER
                     MFKERIINLQTLGNIRLIGELFKQKMVTEKTVHHIIQELLETDSKICPEEENVKAICH
                     FFNTIGKQLDEGPKSRRINDLYFNRLNKLSTNQQLAPHMRFMVRDLIDLRSNNWIPRR
                     EEVPVQPQERYSMSDNRDWHGRPPIVEDITGGPAPALVKAKVPWSVHRGTLSDKDRVL
                     KTVNGILSKLIPEKFDLLKGQLMDPGITPADILKGVISSIFDKAVLEPTFCPMYAQLC
                     SDLNNNLPPFPSDEPDGKEITFKRLLLNNCREAFEGANQLRAEIRQMTAPEQDAERKD
                     KERMINLRTLGNIRLIGELSNQKLVPEKIIHYIIEELLGTEPMEENAEAICLFLNIIG
                     KQLDEGPNSRRINNLYFNRLKALSTNQHLAPCTRLMIRDVIDLRSRKWIPRWEKVLFY
                     NNLY"
     misc_feature    484..1152
                     /gene="LOC139904132"
                     /note="MIF4G domain; Region: MIF4G; pfam02854"
                     /db_xref="CDD:397130"
     misc_feature    1339..2004
                     /gene="LOC139904132"
                     /note="MIF4G domain; Region: MIF4G; pfam02854"
                     /db_xref="CDD:397130"
ORIGIN      
        1 aattaaaaag gtatcaagac ttaaggtatg cagggtgatc aaaaaagtgt cccacgttga
       61 gtttggttca tctgatcgag cttcgtgagc gtgttgatta tactagaata cagaccaact
      121 taaggaggtt gtctacatcc ctgaggagag aaagtcaaac tagaaatgga gactgaggtt
      181 tatggcgaga cccagaattg cgctaaatct gaaggaactc tgcaggtgct agctccgcct
      241 ctagagcctg ataaccatga ttggcgtgga ctacctcctc ccatcgagga gaggtcttgt
      301 gatgcaaatc gtgacaatcg tgatttcagc aggttcgata gtacgcaaga acataattca
      361 cattatgcta gaccacaagc ctctcctaac caaagggcgg gtgggcctgc tcctgctctt
      421 gtcaaagcta aggtcccatt tcgtaggagg actctctctg atagggatcg tgtcttcatg
      481 actgttaaag ataatctgga caagttgact ctgaaaaagt ttgatattct caagggtcaa
      541 catttcattt cgaggattac tacagctgat atcttagcgg gggttgtttc gttgatattt
      601 aacaaggctg ttctcgagcc tatatattgt cctatgtacg cgcaactatg ttcagatctt
      661 aataaaaatc tcccaccgtt tcgatcggat gaacctgaca gaatggagat cacattcaaa
      721 cgcgtgctat tgaatcgttg ccaagaggct tttgaaggtg ccgaccagct gagggcagaa
      781 ataaggcaga tgactgcccc tgaacaagat tatgaacgca tgtttaaaga aagaatcatt
      841 aaccttcaga ctcttggaaa catacgttta attggtgaac ttttcaagca aaaaatggtt
      901 accgaaaaga ccgttcatca catcatacag gagcttttgg agacagacag taaaatatgt
      961 ccagaggaag aaaatgtgaa ggcaatatgt cattttttta acaccattgg gaaacaactt
     1021 gacgaaggcc caaagtcgag acgaattaac gatctttact ttaaccgact caataagcta
     1081 tcgacaaatc aacagttggc tccacatatg aggttcatgg ttcgtgatct tattgatcta
     1141 agatcaaata actggattcc aaggagggaa gaggtgccag ttcagcctca ggaacgctac
     1201 tctatgtccg ataatcgtga ttggcatgga agacctccta tcgttgagga tatcacgggt
     1261 gggcctgctc ccgctcttgt caaagctaag gtcccatggt cagttcatag ggggactctt
     1321 tctgacaagg atcgtgtctt gaagacagtt aatggtattc tgagcaagtt gattccggaa
     1381 aagtttgatc ttctcaaggg tcaacttatg gacccgggga ttacaccagc tgatatttta
     1441 aagggggtta tctcgtcgat atttgacaag gctgttcttg agcctacatt ttgtcctatg
     1501 tatgctcaac tttgttcaga tcttaataac aatctcccgc cgtttccatc ggatgaacct
     1561 gacggaaagg agatcacatt taaacgattg ttattgaata attgccgaga ggcttttgaa
     1621 ggtgccaacc agttgagggc agaaataagg cagatgactg cccctgagca agatgctgaa
     1681 cgtaaggaca aagaaagaat gattaatctt cgaactcttg gaaacattcg tttaattggt
     1741 gaactttcaa accagaaatt agttccagaa aagatcattc attacatcat agaggaactt
     1801 ttggggaccg aacctatgga agaaaatgcg gaggcaattt gtcttttttt aaacatcatt
     1861 ggcaaacaac ttgacgaggg cccaaactcg agacgaatta acaatctcta ctttaatcga
     1921 ctcaaggcac tatcaacaaa ccaacatttg gctccgtgta caaggttaat gattcgtgac
     1981 gttattgatc taagatcacg taagtggatt ccaaggtggg aaaaagtact tttttataat
     2041 aatctatatt agtgaccac
//
LOCUS       XM_071886071            1469 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904133), mRNA.
ACCESSION   XM_071886071
VERSION     XM_071886071.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1469
                     /gene="LOC139904133"
                     /note="uncharacterized LOC139904133; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904133"
     CDS             58..1290
                     /gene="LOC139904133"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742172.1"
                     /db_xref="GeneID:139904133"
                     /translation="MNSKKLIESNSLKEALCAQQRLLQKLYNELDVEREAAATAASEA
                     MSMIHRLQGEKAAVKMEAEQFKRLAEEKMNHAEESMEIFEEIMCQKEMEVAALDYQVQ
                     AYRYKLLSLGYDDLDPEKMLQRTDSLGETSGKSIQKRLKLPNLKKGPLERDRSITEDP
                     DMIASLVEESLRDYENNQNLDMGLKVEHGSSSVDISSYLEQIRELDKVVEDMVGEQYS
                     STSSLPSKINDVDIIKTSQKSIDDKVPSTSLSPSENDVYEVPLVDETLYEDEGKSIFK
                     DDEKVKKLTSLPQSPEKLYEIDSLNNKPVFSNEKYKKVFMPKDGSNVDCHLALVQPTT
                     SASETEGETGVVVQNVRQEPVATREEQELRLLHEINEKLNSIQNEIKGRNTRNDESPV
                     NLDLPVIQLREAMMDFWF"
     misc_feature    85..360
                     /gene="LOC139904133"
                     /note="Region: Zein-binding; pfam04576"
                     /db_xref="CDD:428019"
ORIGIN      
        1 cttttgatct tcattggcac aattaggtaa atattttgtc tgtttttgat tcacatcatg
       61 aattcaaaaa agttgataga atcgaatagt ttaaaagaag cgctttgcgc tcaacaacgg
      121 ctgttacaaa aactctacaa tgaattagac gtagaaagag aagctgccgc taccgcggct
      181 agtgaagcaa tgtcaatgat acatcgttta caaggagaaa aagcagccgt aaaaatggaa
      241 gccgaacaat tcaaaagatt agcagaagaa aaaatgaatc atgccgaaga atcaatggaa
      301 atattcgaag aaattatgtg ccaaaaggaa atggaagttg ctgctcttga ttaccaagtt
      361 caagcctata gatacaagct attaagctta ggatatgatg atcttgatcc cgaaaaaatg
      421 ttgcaacgga ctgacagttt aggggaaaca agcgggaaat cgatacaaaa acgtttaaag
      481 ttgcctaatt tgaaaaaggg tcctttggaa agggataggt caataactga agatcctgat
      541 atgattgcaa gcttagtgga agaaagttta cgcgattatg aaaataatca aaacttggat
      601 atgggtttaa aggtagaaca tggttcttcg tctgtggata ttagttcgta tttggagcaa
      661 attcgagaat tagacaaggt tgttgaagac atggtaggag aacaatattc gagcacctcc
      721 tctctaccat cgaaaattaa tgacgtggac attataaaaa cgtcacaaaa atcaatagac
      781 gacaaggtac cctctactag tttgtcgccg agtgagaatg atgtttatga agtcccatta
      841 gttgatgaaa ctctttatga agatgaggga aaatcaatct ttaaagacga cgaaaaggtc
      901 aagaagttga cttctttacc acaatcgcct gaaaaactat atgaaattga ttcattgaat
      961 aataaacctg ttttttctaa tgagaaatac aaaaaggtgt ttatgccaaa agatggttcc
     1021 aacgtcgact gccatttggc cctcgtgcaa ccaactacat cggcttcaga gaccgaaggt
     1081 gaaactggtg ttgttgtgca aaatgtaaga caagaaccgg ttgccacaag agaggaacag
     1141 gaattgagac tgttacacga gattaatgag aagttaaatt cgatacaaaa tgaaattaaa
     1201 ggcagaaata caagaaatga cgaatctcct gtaaaccttg atttacccgt gattcaactt
     1261 agagaggcaa tgatggattt ctggttttga gcaaggtgat gaatatatcg cgtgattaca
     1321 atagctacta atgacaaaaa tttatcgagt aagagaatac ttcttgttta tggcaacctt
     1381 tgacatgtaa caaaaattta gtcagttaac tgtttggtat caactatcaa cacaaagtca
     1441 agtaactcgt gttgagctcc ctcacataa
//
LOCUS       XM_071886072            1063 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides translation initiation
            factor IF3-4, chloroplastic-like (LOC139904134), mRNA.
ACCESSION   XM_071886072
VERSION     XM_071886072.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1063
                     /gene="LOC139904134"
                     /note="translation initiation factor IF3-4,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139904134"
     CDS             27..818
                     /gene="LOC139904134"
                     /codon_start=1
                     /product="translation initiation factor IF3-4,
                     chloroplastic-like"
                     /protein_id="XP_071742173.1"
                     /db_xref="GeneID:139904134"
                     /translation="MAGVTTASCSIPPFKQPILLSKFQSKPLHLRFDFPNSSGNRRIT
                     CRYGGGGGGGSYSRQGDNRRPKKPSDDDPALDISSIRSSTVRLIDEEQNMVGVVSKSA
                     AIQMAEDAELDLVILSPEADPPVVKLMDYKKYKYEQQKKKRDQQKKSSAHRVDQKELK
                     MGYNIDVHDYTVRLKAAQKFLKDGDKVKLIVNLKGRENEFKNNAIELIRRFRDDVGEL
                     AVEESKNFRDRNMTLVLVPNKAVTQKEAPKKKDKSSGSEVSASSV"
     misc_feature    264..746
                     /gene="LOC139904134"
                     /note="Translation initiation factor IF-3 [Translation,
                     ribosomal structure and biogenesis]; Region: InfC;
                     COG0290"
                     /db_xref="CDD:440059"
     polyA_site      1063
                     /gene="LOC139904134"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agaatttaaa aaataaatta aattaaatgg ctggggttac tactgccagc tgctcaattc
       61 cacctttcaa gcaaccaatt ttactttcta aatttcagtc aaaaccctta catctgcgtt
      121 ttgacttccc taattcctcc ggtaaccgtc gcatcacctg ccggtacggc ggtggtgggg
      181 gtggaggaag ctattctcgt caaggagata atagaagacc taaaaaacct tcagatgacg
      241 accctgctct tgatatttca agtattaggt caagtacagt gaggcttatt gatgaggaac
      301 aaaatatggt tggtgtagta tctaaaagtg ctgctattca aatggctgaa gatgctgaac
      361 ttgacttggt tatattgtct ccagaggcag atcctccagt tgtcaagttg atggattaca
      421 aaaaatataa atatgagcag caaaagaaga aaagagatca gcagaagaaa agttctgctc
      481 atcgtgtgga tcaaaaggag cttaaaatgg gttacaacat tgatgtgcat gattataccg
      541 tacgtttgaa agccgctcag aagtttctta aagatggtga caaggttaaa ctaatagtaa
      601 acttgaaggg acgtgaaaat gaatttaaaa acaatgctat tgagctaata agacgtttcc
      661 gtgatgatgt aggggagcta gcggttgagg agagcaagaa tttcagagac aggaacatga
      721 cattggtatt ggtcccaaac aaagctgtta cgcaaaaaga agcacccaag aagaaagaca
      781 agtcatctgg gtctgaagta tcggctagta gtgtatgagc atgaccactg aagtttgtga
      841 tcgtgatttc gagtaaggac agtaagttgc catccttcga gtttttattc atagatttac
      901 aatatcatgt atagttattt agagtactaa acatgtaaga aaataattat ttttgcttgg
      961 tagcaatagc agtaaccgtg ttatcatgtg ttatgattct tgtatgtttc agaatgttta
     1021 gtagccataa tagtccgtag cgacacttct tagttttgaa tca
//
LOCUS       XM_071886073            2261 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904135), mRNA.
ACCESSION   XM_071886073
VERSION     XM_071886073.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2261
                     /gene="LOC139904135"
                     /note="uncharacterized LOC139904135; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139904135"
     CDS             13..2115
                     /gene="LOC139904135"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742174.1"
                     /db_xref="GeneID:139904135"
                     /translation="MLSASTKLHCSPNFTFTKSPNFPIPFSPKILYIHSHKSLIQCAR
                     KGAKRTGKSRYPSEKKKLKSIQQTQNQIDKFIGFWRFFKLGVSVDRDPGKDFVGVSDA
                     VLEEVAKVLEFPVASMLPPEAFTVLRKSFDARKSQKEPKFVYTVEMNVDMLLNLEPRT
                     YEFISNLEPKVGVIEHIPYERVVGDLVNVINVTKKIDHDKVLGENGLSGSYKHPVAKR
                     PKIAVVGSGPAGLFASLVLAEFGVNVTMIERGQPVEKRGGDIGALVVRKILKSESNFC
                     FGEGGAGTWSDGKLVTRIGRNSGSVLSVMKTLVRFGAPESILVDGKPHLGTDRLIPLL
                     RNFRQHLQDLGVNIRFGTRVDDLIVENGHVVGVNVSDSSGKLQFSSEKLGFDAVVLAV
                     GHSARDVYHMLLSHNMELIPKDFAVGLRVEHPQELINAIQYSKLANEVRSGRGKIPVA
                     DYKVVEYVKGEDEDTQVASQRSCYSFCMCPGGQVVVTSIDPSELCINGMSFSRRASKW
                     ANAALAVTVSPKDFNALGFHGPLAGVDFQREFERKAATMGGGNFVVPVQTVKDFVDNK
                     LSVTTVPSSSYRLGVKAANLHELFPDHITEALQHSISTFDKELPGFISNDALLHGVET
                     RTSSPVQIPRNPDTFESTSLGGLYPVGEGAGYAGGIVSAAVDGMYAGFALAKKLQLYE
                     GDFESIFGRTQNSGFAKY"
     misc_feature    <550..>756
                     /gene="LOC139904135"
                     /note="dihydropyrimidine dehydrogenase subunit A;
                     Provisional; Region: PRK11749; cl46914"
                     /db_xref="CDD:481254"
     misc_feature    661..2049
                     /gene="LOC139904135"
                     /note="FAD-dependent dehydrogenase [General function
                     prediction only]; Region: COG2509"
                     /db_xref="CDD:441999"
ORIGIN      
        1 cccataccag ctatgttatc agcttccact aagctacact gttctcccaa tttcactttt
       61 acaaaaagcc ctaatttccc aatcccattt tcacccaaaa tcctttatat tcattctcac
      121 aaatccttaa ttcaatgtgc aagaaaaggg gccaaaagaa caggtaaatc gagataccca
      181 tcagagaaaa aaaagcttaa atctatccaa caaacacaaa accagattga taaatttata
      241 ggcttttgga gatttttcaa gcttggtgtt tcagttgata gagaccctgg taaagatttt
      301 gttggtgttt ctgatgctgt gcttgaagaa gttgctaaag ttcttgaatt tccggttgct
      361 tcaatgttac ctccagaagc ttttacagtt ttgaggaaat cgtttgatgc gagaaagagt
      421 cagaaggagc caaaatttgt gtacacggtg gagatgaatg ttgatatgct tctgaatctt
      481 gaacctcgaa cttatgaatt tatttcaaat ttggaaccca aagttggggt aatagaacat
      541 attccttatg aaagagttgt tggtgattta gttaacgtaa ttaatgttac caagaagatt
      601 gaccatgata aagtcctggg agaaaatggt cttagtggtt cttataagca tcctgttgct
      661 aaaagaccaa agattgcggt tgtgggtagt ggtccagcgg ggttgtttgc gtcccttgta
      721 cttgcagagt ttggtgttaa tgtgactatg attgaaagag gtcaaccggt tgaaaaacgt
      781 ggaggtgata ttggtgcttt ggttgtgcga aagatactga aatcggaaag caacttttgt
      841 tttggcgagg gtggtgcagg tacttggagt gacggaaagt tggtcactag aattgggcgc
      901 aacagtggaa gtgttttgtc ggttatgaaa actttagttc ggtttggagc tccagagagc
      961 atcttggttg atggaaaacc tcatttggga acagataggc tgataccact tcttcgtaac
     1021 tttcggcaac atttacagga tttaggggtt aacattaggt ttggaacacg agtagatgat
     1081 ttgatcgtag agaatggtca cgttgtcggt gtcaacgtat ccgattcaag tggtaaatta
     1141 caatttagta gcgagaaact gggctttgat gcagttgttc ttgcagtcgg gcattctgca
     1201 cgcgatgtat atcacatgct tctttctcat aatatggaat tgattcctaa agattttgct
     1261 gtcggtttgc gggttgaaca tccacaggag ttgataaatg ctatacagta ctctaaattg
     1321 gcaaatgagg ttcgaagcgg gcgtgggaaa ataccagttg ccgattacaa ggttgttgaa
     1381 tacgttaaag gggaggatga agatacacag gttgcttcac aacgcagttg ttattctttc
     1441 tgcatgtgcc ccggtgggca ggttgttgta actagcatag atccatcgga actttgtata
     1501 aacggcatgt cattttctcg gagggcatcc aaatgggcta acgccgcact tgctgtcact
     1561 gtatcgccca aggatttcaa cgcccttggt tttcatggac ctcttgcagg tgtcgatttt
     1621 cagagggaat tcgaacggaa agctgccact atgggaggtg gaaattttgt tgtccctgtg
     1681 caaactgtca aagatttcgt ggataataag ttgtcagtaa cgactgtacc atcatcgagt
     1741 tatcgattag gagtcaaggc agcaaatctc catgagttgt ttcctgatca tataacagag
     1801 gcattgcagc attcaatttc aacgtttgac aaagagttac caggattcat ttccaacgat
     1861 gcccttctgc atggagtgga gactagaact agttctccgg tccagatacc taggaatccc
     1921 gacacttttg agagcacgtc attaggagga ttatatccag tgggagaagg tgcagggtat
     1981 gcaggtggga ttgtaagtgc agccgttgat ggcatgtacg ctggttttgc tttggcaaaa
     2041 aaactacaac tttacgaggg tgactttgag tcaatttttg gaagaactca gaattctgga
     2101 ttcgcgaaat actaaaaaaa tgctatacta tagcatacta ttattaaaat agttcacatt
     2161 ttttctaacc ttgatgaccc attctctttg taatatgagg tagttagttt agtctttggt
     2221 tccaatatct gtgagttgta tttaatgaac ttcacattaa a
//
LOCUS       XM_071886074            2117 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heat shock 70 kDa
            protein-like (LOC139904137), mRNA.
ACCESSION   XM_071886074
VERSION     XM_071886074.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2117
                     /gene="LOC139904137"
                     /note="heat shock 70 kDa protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139904137"
     CDS             162..2108
                     /gene="LOC139904137"
                     /codon_start=1
                     /product="heat shock 70 kDa protein-like"
                     /protein_id="XP_071742175.1"
                     /db_xref="GeneID:139904137"
                     /translation="MATKQDKAIGIDLGTTYSCVGVWQNDRVEIVPNDQGNRTTPSYV
                     AFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRRYTDPSVQNDMKLWPFKVIAGAGD
                     KPMIVVNYKGEEKTFAPEEISSMVLVKMKEIAEAFLGQTIKNAVVTVPAYFNDSQRQA
                     TKDAGAISGLNVMRIINEPTAAAIAYGLDKKSSRKGEQNVLIFDLGGGTFDVSLLTIE
                     EGIFEVKSTAGDTHLGGEDFDNRLVNHFVTEFKRKNKKDISGNARALRRLRTACERAK
                     RTLSSSSQTTIEVDSLFEGIDFYATITRARFEELCLDLFRKCMDPVEKCLKDAKIDKG
                     SVHEVVLVGGSTRIPKVQQLLIDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGDQK
                     VQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEG
                     ERARTKDNNLLGKFELTGIPPAPRGVPQINVTFDIDANGILNVSAEDKTAGVKNKITI
                     TNDKGRLSKEEIERLVQEAEKYKAEDEEVKKKVEERNALENYAYNMRNTVRDEKFASK
                     LGADEKRSIEKAVDEGLEWLEKNQLAEVDELEDKLKELEGVCNPIISKMYQGAGASGD
                     VPMGEGTANGGAGGGAGPKIEEVD"
     misc_feature    171..2105
                     /gene="LOC139904137"
                     /note="heat shock 70 kDa protein; Provisional; Region:
                     PTZ00009"
                     /db_xref="CDD:240227"
ORIGIN      
        1 cctcgtacct tcccctgttt ctctagaact gtcccttttt ttttcgatct cccctataaa
       61 acccaaaatc ccgatgttaa aaccatctga aaatcgaaga acaacaagta aacaacaaca
      121 aatattaaaa gcaagcaaac aacaaaaatt cacaggcgat tatggctact aaacaagaca
      181 aagcaatcgg aatagacctg ggtacaactt acagttgtgt cggggtatgg caaaacgatc
      241 gagttgaaat cgtcccaaac gaccaaggca accgtacaac accttcttat gtcgcgttca
      301 ctgacaccga acgtttaatc ggcgacgcag ctaaaaacca agtcgctatg aacccacgaa
      361 acactgtttt cgacgctaaa cgtttgatcg gaaggcgcta caccgatcct tcagttcaaa
      421 acgacatgaa gttatggccg tttaaagtca tcgccggtgc cggagacaaa cccatgatag
      481 tcgttaatta taaaggcgaa gagaaaacct ttgcaccaga agagatttca tctatggtgt
      541 tggttaaaat gaaggaaata gcggaagcgt ttttgggaca aacgattaag aacgcggttg
      601 ttacggttcc tgcttatttt aacgattcgc aacggcaagc tacgaaagac gctggtgcaa
      661 tttcggggtt gaatgtaatg aggattatta atgagccgac tgcggctgcg atcgcgtacg
      721 ggttggataa aaagtcgtcc cgaaaaggcg aacaaaatgt tttgatattc gatttgggtg
      781 gtgggacgtt tgatgtgtcg ttgttgacga ttgaagaagg gatatttgaa gtgaagtcga
      841 ctgcgggtga tacgcattta ggcggtgagg atttcgataa tcggttggtt aatcatttcg
      901 tgacggagtt taaacggaaa aataagaagg atattagtgg gaacgccagg gcgttgaggc
      961 ggttgaggac ggcgtgtgag cgtgcgaaac ggacgttatc ctcgtcttca caaacgacga
     1021 tagaagtcga ttccttgttt gaaggaattg acttttacgc gacgataact cgtgcgaggt
     1081 ttgaagagtt gtgtttggat ttgtttagga agtgtatgga tccggttgag aagtgcttga
     1141 aagatgcgaa aatcgataag ggttcggttc atgaagttgt gctcgttggc gggtcgaccc
     1201 ggataccgaa agttcaacag cttttgattg atttctttaa cgggaaggag ctttgtaaaa
     1261 gcataaatcc cgatgaagcg gtggcgtatg gtgcggccgt gcaggccgcg attttaacgg
     1321 gtgaaggaga tcagaaggtt caagaccttc tcctccttga tgtgacacca ctaagtctcg
     1381 gtttagagac agctggcggt gtcatgacgg ttttaatccc gaggaataca acgattccga
     1441 ctaaaaaaga gcagattttt tcgacgtact ctgataatca acccggggtg ttgattcaag
     1501 tgtacgaagg agaacgagcg agaactaaag ataacaattt gcttggaaaa tttgagctta
     1561 cggggatccc acctgccccg agaggtgttc ctcagattaa tgtgactttc gatatcgatg
     1621 cgaatgggat tttgaatgtt tcggcggagg ataagactgc aggggttaag aacaagatta
     1681 cgatcacaaa cgataagggg agattgagta aggaagagat cgagcgattg gtacaagaag
     1741 cggagaaata caaagcggag gatgaagagg tgaagaaaaa ggtggaggag agaaacgcgc
     1801 tcgagaatta tgcgtataat atgcggaata cggtgaggga cgagaagttc gcttcgaagt
     1861 taggggctga tgagaagcgg agtatcgaga aggcggtgga cgaaggattg gaatggttgg
     1921 agaagaatca gttagcagaa gtggatgagt tggaagataa gttgaaggaa ttggaaggtg
     1981 tttgtaaccc cattatttct aaaatgtatc aaggtgccgg tgcaagcggt gatgtgccga
     2041 tgggtgaggg gacggctaat ggtggtgctg gtggtggtgc cggaccaaaa attgaagagg
     2101 tggattagat ttgaggt
//
LOCUS       XR_011778672            2340 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904138), transcript variant X1, ncRNA.
ACCESSION   XR_011778672
VERSION     XR_011778672.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2340
                     /gene="LOC139904138"
                     /note="uncharacterized LOC139904138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904138"
     ncRNA           1..2340
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904138"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904138"
ORIGIN      
        1 caaagaaggg gttacgaagg ttgcatcatt cacgacactc agaaaaaaga aaaccctaat
       61 ttcatctccc aaatcatcga caattatcta atactctcta atacaatcgg ttcaagatca
      121 tcatctgtac atataacagt acgtttttta atcaacgatt agtggattta atcgattacc
      181 gatagttcat cgccgtctct gtcaatcatt gataagctcc ggtcggtttg cccttctatg
      241 gataagcagg gggcgttaaa ctcattgcca attgaaccaa ttcgctttaa ggaatcatac
      301 acaaatggat ttttgaaaga aatttcagat gatggagctt ctgacttact agctaagtct
      361 ggggtgtctg tttggttggg ttgactttgg ctctcataag aggtttaaga ttgtggttag
      421 catcagaggg gacagtattt gtggctcatt taggagaaac attgtgagta tcttcaaaat
      481 tgcaagagca agcttgtttt atcgatcaat ggaagtaacg agcaaatctg cgatcagtta
      541 atggaagtag cacttgctgg ttacattcga ggatttcatt ccgagattta caacaatatc
      601 cttcagctga tgcacaaata ctcgaccaag acaagtcaat tgtggaagtt tccttgaagt
      661 taacagcata tagctctcaa agactctcca ttgtgtgggc ttcggttgga catctttagg
      721 ctgcaagata aagaaatgct ctcatctaga gacagagaag ggttagtgac agaaagtgga
      781 aggaaattgt gagaaaggag caatttctac cgaaaaggcg tgggatcttt ttcttgcaag
      841 ctaggacttc catcttatac ttatgtacaa gaaaagaaaa aaggtctgct tcttgcgcga
      901 gttcaagtgg cactagcaaa agagggatac gatgccaagg aaattttcgt gctggcaggt
      961 actcagtttt accttaaagt tctatatttt atacaggtat agtgtatcag ttaggtgagc
     1021 atgttaaaac tagttgacat ctaaccctgt taagtgataa tttaatatcc ttaatcaaca
     1081 gtttaagcat gaaaaaacat attgacattt tttgatcaat tgattcgtta aagataaaac
     1141 ctaggtttac ttacatggct ggaggagcat gtgtggtcga gtctttgttg gaaatgtgat
     1201 gattaataaa tgcatatgca gagacaagtt caacttctat agtctctgta gtcatatcat
     1261 attcggcaaa ttcaaattag aggtatttca ttcgcgtact taaatacaat tatgataatg
     1321 aatatggttt aaaccatgct actccaattt aaggggcatt gtggttggtg ggtgaaacct
     1381 ctttttcaaa aactcctggg ttatattcaa ttgtgcaaac aggtcgaagt atcatccttc
     1441 tcggagttca tttcgcatat tcattcaaca agcagattgg gagtggagtt gaaacatcat
     1501 attgggatga accttggaag tttatattca ttcgcaaatt catttagtaa gcaggttcaa
     1561 cttctatagt ctctaatcga tgcgaacatg ctgcaggggg ctgctggaaa tagtcttttc
     1621 agaataatat aatgtctaaa aaagtcaaag tttttgtatg gcgcaccaag caaaaaagaa
     1681 ttctcgttcg tgtggaactc gacaagcgtg gtaaaaactt gaattccatt cggcattcaa
     1741 catgtgatga agacttggag acaacgaaac atgcgatttt caagtgtaag caacctaagg
     1801 atgtgtggga tgatggggat ttatgagttc ctctatccta ttatttgagg aaagcattcg
     1861 ttggaaaaaa ataatcgatg tttttcaaca tttggtaaaa caatatggca tgcactcgaa
     1921 tccattacag gttatgtgat atggattaac agaaactcgg aagtattcaa gaataagcaa
     1981 tggaatggac cggttgtcct taacgagatc catgtgagaa ccttcgagtg gatatcgaat
     2041 tgaacaaatc atgctaaatt agagtggcat gtgtggttgt tgaatccaag ttcatattgt
     2101 gatcagtaga ggtgtgttaa agttgggttg ccatctctac aacttaaagt taatagctct
     2161 tgccgatggt atctattctt ggtgagccct catgttacaa tagtgttgta tggtgttcgt
     2221 gttgtctgga tatatgtaat ctgagtatgc tttcgtgcat acttattgta tcctcaagtt
     2281 gttttttaat aaaaatacta ttgctcgcct ttaaaaaaaa ttatgttcgt gattttttta
//
LOCUS       XR_011778673            2376 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904138), transcript variant X2, ncRNA.
ACCESSION   XR_011778673
VERSION     XR_011778673.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2376
                     /gene="LOC139904138"
                     /note="uncharacterized LOC139904138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904138"
     ncRNA           1..2376
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904138"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904138"
ORIGIN      
        1 caaagaaggg gttacgaagg ttgcatcatt cacgacactc agaaaaaaga aaaccctaat
       61 ttcatctccc aaatcatcga caattatcta atactctcta atacaatcgg ttcaagatca
      121 tcatctgtac atataacagt acgtttttta atcaacgatt agtggattta atcgattacc
      181 gatagttcat cgccgtctct gtcaatcatt gataagctcc ggtcggtttg cccttctatg
      241 gataagcagg gggcgttaaa ctcattgcca attgaaccaa ttcgctttaa ggaatcatac
      301 acaaatggat ttttgaaaga aatttcagat gatggagctt ctgacttact agctaagtct
      361 ggggtgtctg tttggttggg ttgactttgg ctctcataag aggtttaaga ttgtggttag
      421 catcagaggg gacagtattt gtggctcatt taggagaaac attgtgagta tcttcaaaat
      481 tgcaagagca agcttgtttt atcgatcaat ggaagtaacg agcaaatctg cgatcagtta
      541 atggaagtag cacttgctgg ttacattcga ggatttcatt ccgagattta caacaatatc
      601 cttcagctga tgcacaaata ctcgaccaag acaagtcaat tgtggaagtt tccttgaagt
      661 taacagcata tagctctcaa agactctcca ttgtgtgggc ttcggttgga catctttagg
      721 ctgcaagata aagactgaag ccctcatttt cactcaaaaa catttccaga aatgctctca
      781 tctagagaca gagaagggtt agtgacagaa agtggaagga aattgtgaga aaggagcaat
      841 ttctaccgaa aaggcgtggg atctttttct tgcaagctag gacttccatc ttatacttat
      901 gtacaagaaa agaaaaaagg tctgcttctt gcgcgagttc aagtggcact agcaaaagag
      961 ggatacgatg ccaaggaaat tttcgtgctg gcaggtactc agttttacct taaagttcta
     1021 tattttatac aggtatagtg tatcagttag gtgagcatgt taaaactagt tgacatctaa
     1081 ccctgttaag tgataattta atatccttaa tcaacagttt aagcatgaaa aaacatattg
     1141 acattttttg atcaattgat tcgttaaaga taaaacctag gtttacttac atggctggag
     1201 gagcatgtgt ggtcgagtct ttgttggaaa tgtgatgatt aataaatgca tatgcagaga
     1261 caagttcaac ttctatagtc tctgtagtca tatcatattc ggcaaattca aattagaggt
     1321 atttcattcg cgtacttaaa tacaattatg ataatgaata tggtttaaac catgctactc
     1381 caatttaagg ggcattgtgg ttggtgggtg aaacctcttt ttcaaaaact cctgggttat
     1441 attcaattgt gcaaacaggt cgaagtatca tccttctcgg agttcatttc gcatattcat
     1501 tcaacaagca gattgggagt ggagttgaaa catcatattg ggatgaacct tggaagttta
     1561 tattcattcg caaattcatt tagtaagcag gttcaacttc tatagtctct aatcgatgcg
     1621 aacatgctgc agggggctgc tggaaatagt cttttcagaa taatataatg tctaaaaaag
     1681 tcaaagtttt tgtatggcgc accaagcaaa aaagaattct cgttcgtgtg gaactcgaca
     1741 agcgtggtaa aaacttgaat tccattcggc attcaacatg tgatgaagac ttggagacaa
     1801 cgaaacatgc gattttcaag tgtaagcaac ctaaggatgt gtgggatgat ggggatttat
     1861 gagttcctct atcctattat ttgaggaaag cattcgttgg aaaaaaataa tcgatgtttt
     1921 tcaacatttg gtaaaacaat atggcatgca ctcgaatcca ttacaggtta tgtgatatgg
     1981 attaacagaa actcggaagt attcaagaat aagcaatgga atggaccggt tgtccttaac
     2041 gagatccatg tgagaacctt cgagtggata tcgaattgaa caaatcatgc taaattagag
     2101 tggcatgtgt ggttgttgaa tccaagttca tattgtgatc agtagaggtg tgttaaagtt
     2161 gggttgccat ctctacaact taaagttaat agctcttgcc gatggtatct attcttggtg
     2221 agccctcatg ttacaatagt gttgtatggt gttcgtgttg tctggatata tgtaatctga
     2281 gtatgctttc gtgcatactt attgtatcct caagttgttt tttaataaaa atactattgc
     2341 tcgcctttaa aaaaaattat gttcgtgatt ttttta
//
LOCUS       XR_011778674            2199 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904138), transcript variant X3, ncRNA.
ACCESSION   XR_011778674
VERSION     XR_011778674.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2199
                     /gene="LOC139904138"
                     /note="uncharacterized LOC139904138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904138"
     ncRNA           1..2199
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904138"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904138"
ORIGIN      
        1 caaagaaggg gttacgaagg ttgcatcatt cacgacactc agaaaaaaga aaaccctaat
       61 ttcatctccc aaatcatcga caattatcta atactctcta atacaatcgg ttcaagatca
      121 tcatctgtac atataacagt acgtttttta atcaacgatt agtggattta atcgattacc
      181 gatagttcat cgccgtctct gtcaatcatt gataagctcc ggtcggtttg cccttctatg
      241 gataagcagg gggcgttaaa ctcattgcca attgaaccaa ttcgctttaa ggaatcatac
      301 acaaatggat ttttgaaaga aatttcagat gatggagctt ctgacttact agctaagtct
      361 ggggtgtctg tttggttggg ttgactttgg ctctcataag aggtttaaga ttgtggttag
      421 catcagaggg gacagtattt gtggctcatt taggagaaac attgtgagta tcttcaaaat
      481 tgcaagagca agcttgtttt atcgatcaat ggaagtaacg agcaaatctg cgatcagtta
      541 atggaagtag cacttgctgg ttacattcga ggatttcatt ccgagattta caacaatatc
      601 cttcagctga tgcacaaata ctcgaccaag acaagtcaat tgtggaagtt tccttgaagt
      661 taacagcata tagctctcaa agactctcca ttgtgtgggc ttcggttgga catctttagg
      721 ctgcaagata aagaaatgct ctcatctaga gacagagaag ggttagtgac agaaagtgga
      781 aggaaattgt gagaaaggag caatttctac cgaaaaggcg tgggatcttt ttcttgcaag
      841 ctaggacttc catcttatac ttatgtacaa gaaaagaaaa aaggtctgct tcttgcgcga
      901 gttcaagtgg cactagcaaa agagggatac gatgccaagg aaattttcgt gctggcaggt
      961 actcagtttt accttaaagt tctatatttt atacaggtat agtgtatcag ttaggtgagc
     1021 atgttaaaac tagttgacat ctaaccctgt taagtgataa tttaatatcc ttaatcaaca
     1081 gtttaagcat gaaaaaacat attgacattt tttgatcaat tgattcgtta aagataaaac
     1141 ctaggtttac ttacatggct ggaggagcat gtgtggtcga gtctttgttg gaaatgtgat
     1201 gattaataaa tgcatatgca gagacaagtt caacttctat agtctctgta gtcatatcat
     1261 attcggcaaa ttcaaattag aggtcgaagt atcatccttc tcggagttca tttcgcatat
     1321 tcattcaaca agcagattgg gagtggagtt gaaacatcat attgggatga accttggaag
     1381 tttatattca ttcgcaaatt catttagtaa gcaggttcaa cttctatagt ctctaatcga
     1441 tgcgaacatg ctgcaggggg ctgctggaaa tagtcttttc agaataatat aatgtctaaa
     1501 aaagtcaaag tttttgtatg gcgcaccaag caaaaaagaa ttctcgttcg tgtggaactc
     1561 gacaagcgtg gtaaaaactt gaattccatt cggcattcaa catgtgatga agacttggag
     1621 acaacgaaac atgcgatttt caagtgtaag caacctaagg atgtgtggga tgatggggat
     1681 ttatgagttc ctctatccta ttatttgagg aaagcattcg ttggaaaaaa ataatcgatg
     1741 tttttcaaca tttggtaaaa caatatggca tgcactcgaa tccattacag gttatgtgat
     1801 atggattaac agaaactcgg aagtattcaa gaataagcaa tggaatggac cggttgtcct
     1861 taacgagatc catgtgagaa ccttcgagtg gatatcgaat tgaacaaatc atgctaaatt
     1921 agagtggcat gtgtggttgt tgaatccaag ttcatattgt gatcagtaga ggtgtgttaa
     1981 agttgggttg ccatctctac aacttaaagt taatagctct tgccgatggt atctattctt
     2041 ggtgagccct catgttacaa tagtgttgta tggtgttcgt gttgtctgga tatatgtaat
     2101 ctgagtatgc tttcgtgcat acttattgta tcctcaagtt gttttttaat aaaaatacta
     2161 ttgctcgcct ttaaaaaaaa ttatgttcgt gattttttt
//
LOCUS       XR_011778675            2164 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904138), transcript variant X4, ncRNA.
ACCESSION   XR_011778675
VERSION     XR_011778675.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2164
                     /gene="LOC139904138"
                     /note="uncharacterized LOC139904138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904138"
     ncRNA           1..2164
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904138"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904138"
ORIGIN      
        1 caaagaaggg gttacgaagg ttgcatcatt cacgacactc agaaaaaaga aaaccctaat
       61 ttcatctccc aaatcatcga caattatcta atactctcta atacaatcgg ttcaagatca
      121 tcatctgtac atataacagt acgtttttta atcaacgatt agtggattta atcgattacc
      181 gatagttcat cgccgtctct gtcaatcatt gataagctcc ggtcggtttg cccttctatg
      241 gataagcagg gggcgttaaa ctcattgcca attgaaccaa ttcgctttaa ggaatcatac
      301 acaaatggat ttttgaaaga aatttcagat gatggagctt ctgacttact agctaagtct
      361 ggggtgtctg tttggttggg ttgactttgg ctctcataag aggtttaaga ttgtggttag
      421 catcagaggg gacagtattt gtggctcatt taggagaaac attgtgagta tcttcaaaat
      481 tgcaagagca agcttgtttt atcgatcaat ggaagtaacg agcaaatctg cgatcagtta
      541 atggaagtag cacttgctgg ttacattcga ggatttcatt ccgagattta caacaatatc
      601 cttcagctga tgcacaaata ctcgaccaag acaagtcaat tgtggaagtt tccttgaagt
      661 taacagcata tagctctcaa agactctcca ttgtgtgggc ttcggttgga catctttagg
      721 ctgcaagata aagaaatgct ctcatctaga gacagagaag ggttagtgac agaaagtgga
      781 aggaaattgt gagaaaggag caatttctac cgaaaaggcg tgggatcttt ttcttgcaag
      841 ctaggacttc catcttatac ttatgtacaa gaaaagaaaa aaggtctgct tcttgcgcga
      901 gttcaagtgg cactagcaaa agagggatac gatgccaagg aaattttcgt gctggcagat
      961 aaaacctagg tttacttaca tggctggagg agcatgtgtg gtcgagtctt tgttggaaat
     1021 gtgatgatta ataaatgcat atgcagagac aagttcaact tctatagtct ctgtagtcat
     1081 atcatattcg gcaaattcaa attagaggta tttcattcgc gtacttaaat acaattatga
     1141 taatgaatat ggtttaaacc atgctactcc aatttaaggg gcattgtggt tggtgggtga
     1201 aacctctttt tcaaaaactc ctgggttata ttcaattgtg caaacaggtc gaagtatcat
     1261 ccttctcgga gttcatttcg catattcatt caacaagcag attgggagtg gagttgaaac
     1321 atcatattgg gatgaacctt ggaagtttat attcattcgc aaattcattt agtaagcagg
     1381 ttcaacttct atagtctcta atcgatgcga acatgctgca gggggctgct ggaaatagtc
     1441 ttttcagaat aatataatgt ctaaaaaagt caaagttttt gtatggcgca ccaagcaaaa
     1501 aagaattctc gttcgtgtgg aactcgacaa gcgtggtaaa aacttgaatt ccattcggca
     1561 ttcaacatgt gatgaagact tggagacaac gaaacatgcg attttcaagt gtaagcaacc
     1621 taaggatgtg tgggatgatg gggatttatg agttcctcta tcctattatt tgaggaaagc
     1681 attcgttgga aaaaaataat cgatgttttt caacatttgg taaaacaata tggcatgcac
     1741 tcgaatccat tacaggttat gtgatatgga ttaacagaaa ctcggaagta ttcaagaata
     1801 agcaatggaa tggaccggtt gtccttaacg agatccatgt gagaaccttc gagtggatat
     1861 cgaattgaac aaatcatgct aaattagagt ggcatgtgtg gttgttgaat ccaagttcat
     1921 attgtgatca gtagaggtgt gttaaagttg ggttgccatc tctacaactt aaagttaata
     1981 gctcttgccg atggtatcta ttcttggtga gccctcatgt tacaatagtg ttgtatggtg
     2041 ttcgtgttgt ctggatatat gtaatctgag tatgctttcg tgcatactta ttgtatcctc
     2101 aagttgtttt ttaataaaaa tactattgct cgcctttaaa aaaaattatg ttcgtgattt
     2161 tttt
//
LOCUS       XR_011778676            2153 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904138), transcript variant X5, ncRNA.
ACCESSION   XR_011778676
VERSION     XR_011778676.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2153
                     /gene="LOC139904138"
                     /note="uncharacterized LOC139904138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904138"
     ncRNA           1..2153
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904138"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139904138"
ORIGIN      
        1 caaagaaggg gttacgaagg ttgcatcatt cacgacactc agaaaaaaga aaaccctaat
       61 ttcatctccc aaatcatcga caattatcta atactctcta atacaatcgg ttcaagatca
      121 tcatctgtac atataacagt acgtttttta atcaacgatt agtggattta atcgattacc
      181 gatagttcat cgccgtctct gtcaatcatt gataagctcc ggtcggtttg cccttctatg
      241 gataagcagg gggcgttaaa ctcattgcca attgaaccaa ttcgctttaa ggaatcatac
      301 acaaatggat ttttgaaaga aatttcagat gatggagctt ctgacttact agctaagtct
      361 ggggtgtctg tttggttggg ttgactttgg ctctcataag aggtttaaga ttgtggttag
      421 catcagaggg gacagtattt gtggctcatt taggagaaac attgtgagta tcttcaaaat
      481 tgcaagagca agcttgtttt atcgatcaat ggaagtaacg agcaaatctg cgatcagtta
      541 atggaagtag cacttgctgg ttacattcga ggatttcatt ccgagattta caacaatatc
      601 cttcagctga tgcacaaata ctcgaccaag acaagtcaat tgtggaagtt tccttgaagt
      661 taacagcata tagctctcaa agactctcca ttgtgtgggc ttcggttgga catctttagg
      721 ctgcaagata aagaaatgct ctcatctaga gacagagaag ggttagtgac agaaagtgga
      781 aggaaattgt gagaaaggag caatttctac cgaaaaggcg tgggatcttt ttcttgcaag
      841 ctaggacttc catcttatac ttatgtacaa gaaaagaaaa aaggtctgct tcttgcgcga
      901 gttcaagtgg cactagcaaa agagggatac gatgccaagg aaattttcgt gctggcaggt
      961 ttacttacat ggctggagga gcatgtgtgg tcgagtcttt gttggaaatg tgatgattaa
     1021 taaatgcata tgcagagaca agttcaactt ctatagtctc tgtagtcata tcatattcgg
     1081 caaattcaaa ttagaggtat ttcattcgcg tacttaaata caattatgat aatgaatatg
     1141 gtttaaacca tgctactcca atttaagggg cattgtggtt ggtgggtgaa acctcttttt
     1201 caaaaactcc tgggttatat tcaattgtgc aaacaggtcg aagtatcatc cttctcggag
     1261 ttcatttcgc atattcattc aacaagcaga ttgggagtgg agttgaaaca tcatattggg
     1321 atgaaccttg gaagtttata ttcattcgca aattcattta gtaagcaggt tcaacttcta
     1381 tagtctctaa tcgatgcgaa catgctgcag ggggctgctg gaaatagtct tttcagaata
     1441 atataatgtc taaaaaagtc aaagtttttg tatggcgcac caagcaaaaa agaattctcg
     1501 ttcgtgtgga actcgacaag cgtggtaaaa acttgaattc cattcggcat tcaacatgtg
     1561 atgaagactt ggagacaacg aaacatgcga ttttcaagtg taagcaacct aaggatgtgt
     1621 gggatgatgg ggatttatga gttcctctat cctattattt gaggaaagca ttcgttggaa
     1681 aaaaataatc gatgtttttc aacatttggt aaaacaatat ggcatgcact cgaatccatt
     1741 acaggttatg tgatatggat taacagaaac tcggaagtat tcaagaataa gcaatggaat
     1801 ggaccggttg tccttaacga gatccatgtg agaaccttcg agtggatatc gaattgaaca
     1861 aatcatgcta aattagagtg gcatgtgtgg ttgttgaatc caagttcata ttgtgatcag
     1921 tagaggtgtg ttaaagttgg gttgccatct ctacaactta aagttaatag ctcttgccga
     1981 tggtatctat tcttggtgag ccctcatgtt acaatagtgt tgtatggtgt tcgtgttgtc
     2041 tggatatatg taatctgagt atgctttcgt gcatacttat tgtatcctca agttgttttt
     2101 taataaaaat actattgctc gcctttaaaa aaaattatgt tcgtgatttt ttt
//
LOCUS       XM_071886076            2746 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic translation
            initiation factor-like (LOC139904139), transcript variant X1, mRNA.
ACCESSION   XM_071886076
VERSION     XM_071886076.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2746
                     /gene="LOC139904139"
                     /note="eukaryotic translation initiation factor-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 25 Proteins"
                     /db_xref="GeneID:139904139"
     CDS             246..2480
                     /gene="LOC139904139"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor-like
                     isoform X1"
                     /protein_id="XP_071742177.1"
                     /db_xref="GeneID:139904139"
                     /translation="MQADQTVLSLRPGGGANRGRTSGPRFDFGSSDLPSLRPGGGGGA
                     TSLAAFKNNDSRFELRERVRYTRDQLLQLRQVVDIPEEILKVKQEVDTEFFGETQNWT
                     KSEGTLQLPAQPQPRYAEPDNRDWRGRPPVEERSWDANRDFNRFDSRQEPNSQYGRTQ
                     ASPNQGTGGPAPALIKAEVPWSVRRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLI
                     DSGITTADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNINLPPFPSEEPDGKEITFK
                     RVLLNNCQEAFEGADQLRAEIRQMTAPEQESERRDKERMIKLRTLGNIRLIGELLKQK
                     MVPEKIVHHIVQELLGTDGKICPDEENVEAICHFFNTIGKQLDEGPKSRRINDLYFIR
                     LKELSTNQQLAPRMRFMVRDVIDLRSSNWIPRREEVKAKTITEIHTEAERNMGLRRGS
                     TASIRNNRVVVAGAQGGLTPVGLNRMPGAPGTRMMPGAPGMDNDDWEVPRSRSMPRGV
                     QPPLLGQTPSPSQRFLPQGSGGYISGRPSALLQGSGGPVASPLPVTQAAPPARPIATP
                     SPAASAAPKNTDELKRKTFSLLEEYFNVCILDEALICLEELKAPEYHAEFVKEAISLG
                     LDKSPPCVESLSKLLDYLFTKKVLTRSDLITGCLSYGALLDDIAIDLPKAPNNFGEIM
                     GHLVVSGGLDFKIVADVLKTMEDDYFRKAVFTGAKKVVSSSPSGTAILESQAADVGAC
                     ESLF"
     misc_feature    828..1505
                     /gene="LOC139904139"
                     /note="MIF4G domain; Region: MIF4G; pfam02854"
                     /db_xref="CDD:397130"
     misc_feature    1698..>1931
                     /gene="LOC139904139"
                     /note="Protein of unknown function (DUF1373); Region:
                     DUF1373; pfam07117"
                     /db_xref="CDD:462093"
     misc_feature    1983..2321
                     /gene="LOC139904139"
                     /note="MA3 domain; Region: MA3; pfam02847"
                     /db_xref="CDD:397128"
     polyA_site      2746
                     /gene="LOC139904139"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacaccaaac ccaaagaaca tagagttgtt gctctataat aaagggcttc tctctcatct
       61 ttgtctttct ctcacaacag gagagagaaa cagagctcct ccttctatcc ctaaaaaaac
      121 cctatctttc ttcatattca ttatcaagat ttaaaatctt gattattatt acatcaatcg
      181 ccgatttcaa tttgttggtt tttgtgtgtt tctcaagaat taaaaagggt atcaagaatt
      241 aaggtatgca ggctgatcaa accgtgttga gtttaagacc tggtggtggt gctaatcgag
      301 gaagaacaag tggcccacgt tttgattttg gttcatctga tcttccatct cttcgtcctg
      361 gtggcggcgg tggtgctaca tctcttgccg ccttcaagaa caatgattct cgcttcgagc
      421 tccgtgagcg tgttcgttac actagagacc agctgttaca acttaggcag gttgtagaca
      481 tccctgaaga gatactgaaa gtcaaacaag aggtggacac tgagtttttt ggtgagaccc
      541 aaaattggac caaatctgaa ggaactttac agttgccagc tcaacctcag ccacgatatg
      601 ccgagcctga taaccgcgat tggcgtggac gacctcccgt tgaggagaga tcttgggacg
      661 caaatcgtga tttcaacagg ttcgatagta ggcaagaacc gaattcacaa tatggtagaa
      721 cacaggcctc tcctaaccaa gggaccggtg ggcctgctcc ggctctgatc aaagctgagg
      781 tcccatggtc agttcgtagg gggactcttt cagataagga tcgtgtcttg aagaccgtta
      841 aaggtattct gaacaagttg actccggaaa agtttgatct tctcaagggt caacttatcg
      901 actccggaat tacaacagct gatatcttaa agggggttat ttcgctgata tttgacaagg
      961 cagttctcga gcctactttt tgtcctatgt acgctcaact atgttcagat ctcaatataa
     1021 atctcccacc gtttccatcc gaggaacctg acggaaagga gataacattc aaacgtgtgc
     1081 tgttgaataa ttgccaagag gcttttgaag gtgccgacca gttgagggca gaaataaggc
     1141 agatgactgc ccccgagcaa gaatctgaac gtagggataa agaaagaatg attaagcttc
     1201 gcactctcgg aaacattcgt ttaattggtg aacttttgaa gcagaaaatg gtacctgaaa
     1261 agatcgttca tcacatcgta caggagcttt tggggacaga cggtaaaata tgtccagatg
     1321 aggaaaatgt ggaggcaatt tgtcattttt ttaacaccat cggcaaacaa ctcgacgagg
     1381 gcccaaagtc gagacgaatt aatgatcttt actttatccg actcaaggaa ctatcgacaa
     1441 atcaacagtt ggctccacgt atgaggttca tggttcgaga tgttattgat ctaagatcaa
     1501 gtaactggat tccaagaagg gaagaggtga aagcgaagac aattaccgaa attcatactg
     1561 aggcagagag gaacatgggt ctacgtcggg gttcaactgc tagtatcaga aacaaccgag
     1621 tagttgttgc cggtgcccaa gggggtttaa ctcctgtggg tttgaaccgc atgcccggtg
     1681 cgcccgggac ccgcatgatg cccggagctc ctggaatgga caacgatgac tgggaggtcc
     1741 cgaggtctcg ctcgatgcct aggggtgttc agccaccgtt acttggccag acaccgtcac
     1801 caagtcaacg ttttctcccc cagggcagcg gtggttatat aagtggcagg ccgagcgctc
     1861 tattgcaagg aagtggtggt cccgttgcct ctcctcttcc ggttacgcaa gcggccccac
     1921 ctgccagacc gatcgcaaca ccatctcctg ctgcttctgc ggcaccgaaa aatactgacg
     1981 agctcaagag aaaaactttc tctttgctcg aggagtattt caacgtttgt atacttgacg
     2041 aagcgttaat atgcttggag gaactgaaag cacccgagta tcacgccgaa tttgtgaagg
     2101 aagccatctc acttggtttg gataaaagcc cgccatgtgt tgaatcgtta tccaagcttt
     2161 tagattacct tttcaccaaa aaggttctca ctcgatccga cttgataact gggtgccttt
     2221 cgtatggcgc attgttggac gatatcgcca ttgatttacc aaaagcaccg aacaattttg
     2281 gtgagattat gggacatctt gtggtgtcgg gtggcttgga tttcaaaatt gtggcggatg
     2341 ttttgaagac gatggaagat gactactttc gaaaagccgt ttttacaggt gctaagaagg
     2401 ttgttagttc gagcccgtca ggaacagcca ttttggagtc gcaagcggct gacgtgggtg
     2461 cgtgtgaaag cctgttttag taaaccattt atatggtggt tggataatgt cgaaatcaag
     2521 aggtgagtta taagtaaaac tgtatgatct tgtttttgta ttgtttggaa tttttattta
     2581 tgtttttgcg tccgtatttc taaggatact ttttatgttt aacatgatga tgatgtcatt
     2641 ttttgataaa attttgagtg tcgactggta gtggctaaaa tatgtaccgt ttgatagcaa
     2701 aggcaatttg ttatataagt ttttagggca tctatcattt atttaa
//
LOCUS       XM_071886077            2740 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic translation
            initiation factor-like (LOC139904139), transcript variant X2, mRNA.
ACCESSION   XM_071886077
VERSION     XM_071886077.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2740
                     /gene="LOC139904139"
                     /note="eukaryotic translation initiation factor-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 33 Proteins"
                     /db_xref="GeneID:139904139"
     CDS             246..2474
                     /gene="LOC139904139"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor-like
                     isoform X2"
                     /protein_id="XP_071742178.1"
                     /db_xref="GeneID:139904139"
                     /translation="MQADQTVLSLRPGGGANRGRTSGPRFDFGSSDLPSLRPGGGGGA
                     TSLAAFKNNDSRFELRERVRYTRDQLLQLRQVVDIPEEILKVKQEVDTEFFGETQNWT
                     KSEGTLPAQPQPRYAEPDNRDWRGRPPVEERSWDANRDFNRFDSRQEPNSQYGRTQAS
                     PNQGTGGPAPALIKAEVPWSVRRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDS
                     GITTADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNINLPPFPSEEPDGKEITFKRV
                     LLNNCQEAFEGADQLRAEIRQMTAPEQESERRDKERMIKLRTLGNIRLIGELLKQKMV
                     PEKIVHHIVQELLGTDGKICPDEENVEAICHFFNTIGKQLDEGPKSRRINDLYFIRLK
                     ELSTNQQLAPRMRFMVRDVIDLRSSNWIPRREEVKAKTITEIHTEAERNMGLRRGSTA
                     SIRNNRVVVAGAQGGLTPVGLNRMPGAPGTRMMPGAPGMDNDDWEVPRSRSMPRGVQP
                     PLLGQTPSPSQRFLPQGSGGYISGRPSALLQGSGGPVASPLPVTQAAPPARPIATPSP
                     AASAAPKNTDELKRKTFSLLEEYFNVCILDEALICLEELKAPEYHAEFVKEAISLGLD
                     KSPPCVESLSKLLDYLFTKKVLTRSDLITGCLSYGALLDDIAIDLPKAPNNFGEIMGH
                     LVVSGGLDFKIVADVLKTMEDDYFRKAVFTGAKKVVSSSPSGTAILESQAADVGACES
                     LF"
     misc_feature    822..1499
                     /gene="LOC139904139"
                     /note="MIF4G domain; Region: MIF4G; pfam02854"
                     /db_xref="CDD:397130"
     misc_feature    1692..>1925
                     /gene="LOC139904139"
                     /note="Protein of unknown function (DUF1373); Region:
                     DUF1373; pfam07117"
                     /db_xref="CDD:462093"
     misc_feature    1977..2315
                     /gene="LOC139904139"
                     /note="MA3 domain; Region: MA3; pfam02847"
                     /db_xref="CDD:397128"
     polyA_site      2740
                     /gene="LOC139904139"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacaccaaac ccaaagaaca tagagttgtt gctctataat aaagggcttc tctctcatct
       61 ttgtctttct ctcacaacag gagagagaaa cagagctcct ccttctatcc ctaaaaaaac
      121 cctatctttc ttcatattca ttatcaagat ttaaaatctt gattattatt acatcaatcg
      181 ccgatttcaa tttgttggtt tttgtgtgtt tctcaagaat taaaaagggt atcaagaatt
      241 aaggtatgca ggctgatcaa accgtgttga gtttaagacc tggtggtggt gctaatcgag
      301 gaagaacaag tggcccacgt tttgattttg gttcatctga tcttccatct cttcgtcctg
      361 gtggcggcgg tggtgctaca tctcttgccg ccttcaagaa caatgattct cgcttcgagc
      421 tccgtgagcg tgttcgttac actagagacc agctgttaca acttaggcag gttgtagaca
      481 tccctgaaga gatactgaaa gtcaaacaag aggtggacac tgagtttttt ggtgagaccc
      541 aaaattggac caaatctgaa ggaactttgc cagctcaacc tcagccacga tatgccgagc
      601 ctgataaccg cgattggcgt ggacgacctc ccgttgagga gagatcttgg gacgcaaatc
      661 gtgatttcaa caggttcgat agtaggcaag aaccgaattc acaatatggt agaacacagg
      721 cctctcctaa ccaagggacc ggtgggcctg ctccggctct gatcaaagct gaggtcccat
      781 ggtcagttcg tagggggact ctttcagata aggatcgtgt cttgaagacc gttaaaggta
      841 ttctgaacaa gttgactccg gaaaagtttg atcttctcaa gggtcaactt atcgactccg
      901 gaattacaac agctgatatc ttaaaggggg ttatttcgct gatatttgac aaggcagttc
      961 tcgagcctac tttttgtcct atgtacgctc aactatgttc agatctcaat ataaatctcc
     1021 caccgtttcc atccgaggaa cctgacggaa aggagataac attcaaacgt gtgctgttga
     1081 ataattgcca agaggctttt gaaggtgccg accagttgag ggcagaaata aggcagatga
     1141 ctgcccccga gcaagaatct gaacgtaggg ataaagaaag aatgattaag cttcgcactc
     1201 tcggaaacat tcgtttaatt ggtgaacttt tgaagcagaa aatggtacct gaaaagatcg
     1261 ttcatcacat cgtacaggag cttttgggga cagacggtaa aatatgtcca gatgaggaaa
     1321 atgtggaggc aatttgtcat ttttttaaca ccatcggcaa acaactcgac gagggcccaa
     1381 agtcgagacg aattaatgat ctttacttta tccgactcaa ggaactatcg acaaatcaac
     1441 agttggctcc acgtatgagg ttcatggttc gagatgttat tgatctaaga tcaagtaact
     1501 ggattccaag aagggaagag gtgaaagcga agacaattac cgaaattcat actgaggcag
     1561 agaggaacat gggtctacgt cggggttcaa ctgctagtat cagaaacaac cgagtagttg
     1621 ttgccggtgc ccaagggggt ttaactcctg tgggtttgaa ccgcatgccc ggtgcgcccg
     1681 ggacccgcat gatgcccgga gctcctggaa tggacaacga tgactgggag gtcccgaggt
     1741 ctcgctcgat gcctaggggt gttcagccac cgttacttgg ccagacaccg tcaccaagtc
     1801 aacgttttct cccccagggc agcggtggtt atataagtgg caggccgagc gctctattgc
     1861 aaggaagtgg tggtcccgtt gcctctcctc ttccggttac gcaagcggcc ccacctgcca
     1921 gaccgatcgc aacaccatct cctgctgctt ctgcggcacc gaaaaatact gacgagctca
     1981 agagaaaaac tttctctttg ctcgaggagt atttcaacgt ttgtatactt gacgaagcgt
     2041 taatatgctt ggaggaactg aaagcacccg agtatcacgc cgaatttgtg aaggaagcca
     2101 tctcacttgg tttggataaa agcccgccat gtgttgaatc gttatccaag cttttagatt
     2161 accttttcac caaaaaggtt ctcactcgat ccgacttgat aactgggtgc ctttcgtatg
     2221 gcgcattgtt ggacgatatc gccattgatt taccaaaagc accgaacaat tttggtgaga
     2281 ttatgggaca tcttgtggtg tcgggtggct tggatttcaa aattgtggcg gatgttttga
     2341 agacgatgga agatgactac tttcgaaaag ccgtttttac aggtgctaag aaggttgtta
     2401 gttcgagccc gtcaggaaca gccattttgg agtcgcaagc ggctgacgtg ggtgcgtgtg
     2461 aaagcctgtt ttagtaaacc atttatatgg tggttggata atgtcgaaat caagaggtga
     2521 gttataagta aaactgtatg atcttgtttt tgtattgttt ggaattttta tttatgtttt
     2581 tgcgtccgta tttctaagga tactttttat gtttaacatg atgatgatgt cattttttga
     2641 taaaattttg agtgtcgact ggtagtggct aaaatatgta ccgtttgata gcaaaggcaa
     2701 tttgttatat aagtttttag ggcatctatc atttatttaa
//
LOCUS       XM_071886078            1250 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MULTIPOLAR SPINDLE 1
            (LOC139904140), mRNA.
ACCESSION   XM_071886078
VERSION     XM_071886078.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1250
                     /gene="LOC139904140"
                     /note="protein MULTIPOLAR SPINDLE 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904140"
     CDS             35..1162
                     /gene="LOC139904140"
                     /codon_start=1
                     /product="protein MULTIPOLAR SPINDLE 1"
                     /protein_id="XP_071742179.1"
                     /db_xref="GeneID:139904140"
                     /translation="MESERQPSKSTAGLNEPLKLAVAMAILRSKLLKQPPPHTSSAVT
                     SNSDALKWKRKAKERKQEIIRLKQDLVEAEDGLRHELFSGSASCKCYFFENLGKLSSN
                     ELSEGVDGRFNDVLRRRFLRQVRLKERRKRRNEGSTRRLFLSENNAEETEQLKASVDY
                     LVELCDTISSPDDINFSNWSHQAVDFILDAIKNIMSEGKYTEHVEEIIGNLSLRLVRK
                     MCTALQGNEAHQLNTDAQYYVQHLLRKLGSESCIGQRVILAASQRISLLAENLLFLDP
                     FESTFSEMHSSLYILIQLAEFLVSDYLLIWSKMDGFATELFEEWVTSILHARKGLQLL
                     ESRCGLYILYMDRVIGLIAKIVGQVSSLQKLNPGILQSLFC"
ORIGIN      
        1 tccccagcgc ctactgcaat tgagagcggg aataatggaa tcggaacggc aaccgtcgaa
       61 aagcaccgcc ggattaaacg aaccgttaaa gctcgcggta gccatggcta tacttcgttc
      121 taagctcctg aaacaacctc ctcctcacac ttcatctgct gttacctcca attctgacgc
      181 tctcaagtgg aaacgcaagg caaaagagcg taaacaggag atcattagac tcaagcaaga
      241 tctcgttgaa gctgaagatg gactacgcca tgaattattc tcaggaagtg cttcttgcaa
      301 gtgctacttt tttgaaaatt tggggaaact gagctctaat gagctatcgg aaggagttga
      361 tgggagattt aatgatgttt tacgtcgtag atttcttaga caagtgagac tgaaggaaag
      421 aagaaaaaga agaaatgagg gttccacacg tagattgttt ctatctgaaa acaatgctga
      481 agagactgaa cagcttaagg cctcagttga ttatcttgtg gagctatgcg atactatttc
      541 atctccagat gatatcaatt tttcaaactg gtctcaccaa gctgtggatt tcattttgga
      601 tgcaataaag aatatcatgt ccgagggaaa atatactgaa catgttgaag agattattgg
      661 taacttgtca ctgcgtttgg ttagaaaaat gtgcactgca ttacaaggaa atgaagctca
      721 tcagcttaac actgatgccc aatattatgt tcagcatttg cttcgtaaac ttggaagtga
      781 gtcatgtatt ggacagcgag taattcttgc agcttctcaa agaatctctt tgctagcaga
      841 aaatttgtta tttcttgatc catttgaatc aactttttct gaaatgcata gcagtctata
      901 cattttgatc cagcttgccg agtttttggt atcagattac cttttaatat ggtcgaagat
      961 ggatggattc gcaacagagt tgtttgaaga atgggtgact tcaatccttc atgctcgaaa
     1021 aggacttcag ctgttagaaa gcaggtgcgg tctttacatt ttatacatgg atcgtgtaat
     1081 tggattaatt gcaaaaatag tgggtcaggt ttcgtctctg cagaaactta atccgggtat
     1141 tcttcaaagc ttattttgct gaatagctac aatgaaagta tttttttatt cttttcgtca
     1201 actatgtatg ttctcagcct aacaaacagt catctgtcct gcacgacatt
//
LOCUS       XM_071886079            1557 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides shikimate
            O-hydroxycinnamoyltransferase-like (LOC139904141), mRNA.
ACCESSION   XM_071886079
VERSION     XM_071886079.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1557
                     /gene="LOC139904141"
                     /note="shikimate O-hydroxycinnamoyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 42 Proteins"
                     /db_xref="GeneID:139904141"
     CDS             71..1402
                     /gene="LOC139904141"
                     /codon_start=1
                     /product="shikimate O-hydroxycinnamoyltransferase-like"
                     /protein_id="XP_071742180.1"
                     /db_xref="GeneID:139904141"
                     /translation="MGTDQKMKLNVTVKKSSMIPPSETITVESHNKQLWTSNLDLVVG
                     RIHILTVYFYRPNGSSNFFDSSVMKKALADVLVSFYPMAGRLGRDDSGRIVINCNGEG
                     ALFVEAESDSTLDDLGEIVPSPEYRQLTPTVDYSGDISSYPLFIAQVTHFKCGGVALG
                     CGVHHTLSDGLSSLHFINTWSDMARGLCVAVPPFFERTLLQARDPPNPTHDHVEYHPP
                     PSMNTTAKKTGSLSNSSTKMLKLTLEQINALKAKAKSDGGPNHSSYEILAAHLWRCAC
                     KARGLPDDQLTKLYVATDGRSRLSPHLPPGYLGNVVFTATPLAKSGNLTSGSLSSTAK
                     LIHTTLKKMDNDYLRSAIDYLESQPDISALIRGPSYFASPNLNINAWTRLPVYDADFG
                     YGRPIFMGPACILYEGTIYVLPSPNNDRSMSLAVCLDASEQPLFEKYLYEI"
     misc_feature    89..1399
                     /gene="LOC139904141"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     Region: PLN02481; cl23789"
                     /db_xref="CDD:355048"
     polyA_site      1557
                     /gene="LOC139904141"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gaaaaaatgt gtgctctcaa aaacaattct ctcatctccc tctaatctct aaaactccta
       61 attttctata atgggtaccg atcaaaaaat gaaattaaat gtaacagtaa aaaaatcatc
      121 aatgattcca ccttcagaga ccataactgt tgaatctcat aacaaacagt tatggacatc
      181 taatctggat ctagttgttg gtaggattca tattcttacc gtatatttct acagacctaa
      241 tggttcatcg aattttttcg attccagtgt tatgaaaaaa gccctagccg atgtgcttgt
      301 ttctttctat ccaatggcgg gtagattggg tagagacgac agtggcagga ttgtaattaa
      361 ttgtaatggt gagggtgctt tgtttgttga agcggaatca gattctactt tggatgatct
      421 tggagagatt gttccgtcgc cggagtaccg ccagcttacg ccgaccgttg attactccgg
      481 tgatatttct tcgtatcctc tatttattgc tcaggtgacg catttcaagt gtggtggagt
      541 cgctctcggg tgcggggttc atcatacgct atctgacggt ctatcatccc tgcatttcat
      601 taacacatgg tccgatatgg ctcgcgggtt gtgtgtagca gttcccccgt tctttgaacg
      661 aactctatta caagcccgtg acccacctaa cccgacccac gaccatgttg agtaccatcc
      721 acctccgtcc atgaacacca ctgctaaaaa gacgggttcc ctttctaatt cctccaccaa
      781 gatgctaaag ctcacactag aacaaataaa cgcactgaaa gctaaagcca agagtgatgg
      841 tgggcccaac cacagctcgt acgagatctt agcggctcac ctatggaggt gtgcgtgcaa
      901 ggctcgtgga ctacctgatg accagttaac taaactatac gtagcaaccg atggacggtc
      961 aagattgagt cctcacctcc cacctggata cctagggaac gtagttttca cagcgactcc
     1021 tcttgccaaa tcgggtaatc ttacgtcagg atcattgtcg agcactgcaa agctgattca
     1081 caccacattg aagaaaatgg acaacgatta tttaagatcg gctattgatt atttggagtc
     1141 acaacctgac atatcagctc taattcgtgg accaagttac tttgcaagcc cgaacctaaa
     1201 cataaacgct tggaccagac taccggtata tgatgcagat tttgggtatg gacgcccgat
     1261 tttcatggga cccgcgtgca tattgtatga gggaaccata tatgttttac caagtccgaa
     1321 caacgataga agtatgtcac tggcagtgtg cttagatgct agtgaacaac cactttttga
     1381 gaagtacttg tatgaaatct aaggttttga aacaatgagt aattgtgggc aactttgtaa
     1441 tgttattttt agtttaactt tctttgttgt tttctaataa taaaatgtaa tggaagccaa
     1501 tatgaatgag agagttttgt acattaattt ttgctacata tagtcttgtt ttttatt
//
LOCUS       XM_071886080            2445 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904142), transcript variant X1, mRNA.
ACCESSION   XM_071886080
VERSION     XM_071886080.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2445
                     /gene="LOC139904142"
                     /note="uncharacterized LOC139904142; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904142"
     CDS             74..2167
                     /gene="LOC139904142"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742181.1"
                     /db_xref="GeneID:139904142"
                     /translation="MDFKFLGIHSPRQHNPLLSASSLSSVSPHNFVSDHPVTEAWLML
                     DTREAIEREIAKELLRSEILADEIAQQCLKRDMMIEPDTMGQPFGVPVSSLKRNLPPL
                     PSPVVERSSELCLDTSDTKMEDLYSSNNNGEIGPGNFEKSVNNKQPLEIKNLATCDSF
                     DLQEWRCELCQISAPCEKSLNDHLAGKKHQAKMEALNGSKNGDELAPRNIMKSVNKQP
                     VETKISATCVSFDLQEWSCELCQISAPCEKSLNDHLAGKKHRSKLEGLNGSKNGGELG
                     PRNIKKSVDKQPLETKNSATCVSFDLQEWSCELCQISAPCEKSLNDHLAGKKHQAKME
                     DLNGSKNSIENGLRNFNKSVDKQPMETMNSAKCVSSDLQDWSCSLCQISATSKQGLND
                     HLAGKKHHSKMEAFNASKNGGEIGLGNTKKSVNKQPMETKNSATCFSFDLKEWRCDFC
                     QINANSEKVFNNHLAGKKHQAKMEALNGRKNGGEIGPRNTKRSVNKQPLETKKSAKCV
                     LSDLQDWSCSLCQIRPTSEQGLIDHLSGKKHKSNMEALKNGGDIGLRNCTKSVNKQPL
                     ETKNSTTCGSFDLQEWSCSLCQISATSEKDLNNHLAGKKHRSKMEEGFNGSKNCGEIG
                     LKNLKKCVNKQPLETIVSFNLKKDRKTKVVNTNQEFKLWCRLCQVVAPNEKGMIQHKE
                     GKKHLKNLLILCSSV"
     misc_feature    566..640
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    776..850
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    986..1060
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    1196..1270
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    1202..1270
                     /gene="LOC139904142"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275371"
     misc_feature    order(1223..1231,1235..1240,1250..1252,1265..1267,
                     1427..1429,1436..1450,1454..1459)
                     /gene="LOC139904142"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:275371"
     misc_feature    1406..1480
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    1412..1480
                     /gene="LOC139904142"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275371"
     misc_feature    1616..1690
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    1622..1690
                     /gene="LOC139904142"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275371"
     misc_feature    order(1643..1651,1655..1660,1670..1672,1685..1687,
                     1838..1840,1847..1861,1865..1870)
                     /gene="LOC139904142"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:275371"
     misc_feature    1817..1891
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    1823..1891
                     /gene="LOC139904142"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275371"
     misc_feature    2057..2131
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
ORIGIN      
        1 catctcataa actcgccgga atccttttct gatccgtcac tttaacgtca taccctaatt
       61 tatttttaat ccaatggact ttaaatttct aggtattcat tcaccgcggc aacacaatcc
      121 attgttatcg gcgtcatcct tatcgtcggt ttcgcctcac aatttcgtct ccgatcatcc
      181 tgtcacagaa gcatggctga tgttggatac aagagaggcg attgagcgag agatcgcaaa
      241 agaacttttg cggtcggaga tacttgcaga tgagatagca caacaatgtt tgaaaagaga
      301 catgatgatt gaaccggata cgatgggaca gcccttcggt gtacctgtgt ccagcttgaa
      361 gcgaaatcta ccaccattgc catcgcctgt tgttgaacgt tcaagcgagc tttgtttaga
      421 cacttcagac acgaaaatgg aagatcttta tagcagcaac aacaatggtg aaattggccc
      481 gggaaacttt gaaaaatctg ttaacaacaa acaacctctg gaaatcaaga atttagctac
      541 atgtgattcg tttgatttac aagaatggag gtgtgaactc tgtcaaatca gtgccccttg
      601 tgagaaaagt ttaaatgatc atcttgctgg gaagaaacac caggcgaaaa tggaagctct
      661 taatggcagc aaaaatggtg atgaacttgc tccaagaaac attatgaaat ccgtcaacaa
      721 acaacctgtc gaaaccaaga tttcagccac atgtgtttcg tttgatttac aagaatggag
      781 ttgtgaactc tgtcaaatca gtgccccttg tgagaaaagt ttaaatgatc atcttgctgg
      841 taagaaacac cgctcgaaat tggaaggtct taatggcagc aaaaacggcg gtgaacttgg
      901 cccaagaaac attaagaaat ccgtcgacaa acaacctctg gaaaccaaga attcagccac
      961 atgtgtttcg tttgatttac aagaatggag ttgtgaactc tgtcaaatca gtgccccttg
     1021 tgagaaaagt ttaaatgatc atcttgctgg gaagaaacac caggcgaaga tggaagatct
     1081 taatggcagc aaaaacagca ttgaaaatgg cctaagaaac tttaacaaat ctgttgacaa
     1141 acaacctatg gaaaccatga attcagctaa atgtgtttct tctgatttac aggattggag
     1201 ttgttcactt tgtcaaatca gtgctacttc taagcaaggt ttaaatgatc atcttgctgg
     1261 taagaagcac cactcgaaaa tggaagcttt taatgccagc aaaaacggtg gtgaaatcgg
     1321 cctaggtaac actaagaaat ctgttaacaa acaacctatg gaaaccaaga attcagctac
     1381 atgtttctca tttgatttaa aggaatggag gtgtgatttc tgtcagatca atgcaaattc
     1441 tgagaaagtt tttaataatc atcttgctgg gaagaaacac caggcgaaaa tggaagctct
     1501 taatggccgc aaaaacggtg gtgaaatcgg cccaagaaac actaagagat ctgtcaacaa
     1561 acaacctctg gaaaccaaga aatcagctaa atgtgttttg tctgatttac aggattggag
     1621 ttgttcactt tgtcaaatca gacctacttc tgagcaaggt ttaattgatc atctttctgg
     1681 taagaaacac aagtcgaata tggaagctct taaaaacggt ggtgatattg gccttcgaaa
     1741 ctgtacgaaa tctgttaaca aacaaccttt ggaaaccaag aattcaacta catgtggttc
     1801 atttgattta caggaatgga gttgttcact ttgtcaaatt agtgccactt ctgagaaaga
     1861 tttaaataat catcttgctg gtaagaaaca ccggtctaaa atggaagaag gttttaatgg
     1921 cagcaaaaac tgcggtgaaa ttggcctaaa aaacttaaag aaatgtgtca acaaacaacc
     1981 cctggaaacg attgtttcgt ttaatttaaa gaaagatcgg aagactaaag tagtaaatac
     2041 taatcaagag tttaaactgt ggtgtaggct ttgtcaggtt gtagctccta atgagaaagg
     2101 tatgattcaa cataaggaag gtaaaaaaca tctgaaaaac cttcttatat tatgttccag
     2161 cgtatgatgt cggtttagac tcttgagagt attcttgaat gtatgcttct cgtttggttt
     2221 gctgtctttg ttcacacgtg ctaaaagttg cttagataag ttataaaatt tgggttcgat
     2281 ttatggattg agcagggaga ttggaaccta gctttctgtc ccgttcttat ttatttatat
     2341 atagatgttc taactttcat ggattttgag ttgtgattta tgtcatattt ggaagtctcg
     2401 ttttagagga gatcacttta taattttgca gaaagtattc tgtat
//
LOCUS       XM_071886081            1477 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904142), transcript variant X2, mRNA.
ACCESSION   XM_071886081
VERSION     XM_071886081.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1477
                     /gene="LOC139904142"
                     /note="uncharacterized LOC139904142; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904142"
     CDS             74..1339
                     /gene="LOC139904142"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742182.1"
                     /db_xref="GeneID:139904142"
                     /translation="MDFKFLGIHSPRQHNPLLSASSLSSVSPHNFVSDHPVTEAWLML
                     DTREAIEREIAKELLRSEILADEIAQQCLKRDMMIEPDTMGQPFGVPVSSLKRNLPPL
                     PSPVVERSSELCLDTSDTKMEDLYSSNNNGEIGPGNFEKSVNNKQPLEIKNLATCDSF
                     DLQEWRCELCQISAPCEKSLNDHLAGKKHQAKMEALNGSKNGDELAPRNIMKSVNKQP
                     VETKISATCVSFDLQEWSCELCQISAPCEKSLNDHLAGKKHRSKLEGLNGSKNGGELG
                     PRNIKKSVDKQPLETKNSATCVSFDLQEWSCELCQISAPCEKSLNDHLAGKKHQAKME
                     DLNGSKNSIENGLRNFNKSVDKQPMETMNSAKCVSSDLQDWSCSLCQISATSKQGLND
                     HLAGKKHHSKMEAFNASKNGGEIGLGMEV"
     misc_feature    566..640
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    572..640
                     /gene="LOC139904142"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275371"
     misc_feature    order(593..601,605..610,620..622,635..637,797..799,
                     806..820,824..829)
                     /gene="LOC139904142"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:275371"
     misc_feature    776..850
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    782..850
                     /gene="LOC139904142"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275371"
     misc_feature    986..1060
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    992..1060
                     /gene="LOC139904142"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275371"
     misc_feature    order(1013..1021,1025..1030,1040..1042,1055..1057,
                     1217..1219,1226..1240,1244..1249)
                     /gene="LOC139904142"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:275371"
     misc_feature    1196..1270
                     /gene="LOC139904142"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
     misc_feature    1202..1270
                     /gene="LOC139904142"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275371"
ORIGIN      
        1 catctcataa actcgccgga atccttttct gatccgtcac tttaacgtca taccctaatt
       61 tatttttaat ccaatggact ttaaatttct aggtattcat tcaccgcggc aacacaatcc
      121 attgttatcg gcgtcatcct tatcgtcggt ttcgcctcac aatttcgtct ccgatcatcc
      181 tgtcacagaa gcatggctga tgttggatac aagagaggcg attgagcgag agatcgcaaa
      241 agaacttttg cggtcggaga tacttgcaga tgagatagca caacaatgtt tgaaaagaga
      301 catgatgatt gaaccggata cgatgggaca gcccttcggt gtacctgtgt ccagcttgaa
      361 gcgaaatcta ccaccattgc catcgcctgt tgttgaacgt tcaagcgagc tttgtttaga
      421 cacttcagac acgaaaatgg aagatcttta tagcagcaac aacaatggtg aaattggccc
      481 gggaaacttt gaaaaatctg ttaacaacaa acaacctctg gaaatcaaga atttagctac
      541 atgtgattcg tttgatttac aagaatggag gtgtgaactc tgtcaaatca gtgccccttg
      601 tgagaaaagt ttaaatgatc atcttgctgg gaagaaacac caggcgaaaa tggaagctct
      661 taatggcagc aaaaatggtg atgaacttgc tccaagaaac attatgaaat ccgtcaacaa
      721 acaacctgtc gaaaccaaga tttcagccac atgtgtttcg tttgatttac aagaatggag
      781 ttgtgaactc tgtcaaatca gtgccccttg tgagaaaagt ttaaatgatc atcttgctgg
      841 taagaaacac cgctcgaaat tggaaggtct taatggcagc aaaaacggcg gtgaacttgg
      901 cccaagaaac attaagaaat ccgtcgacaa acaacctctg gaaaccaaga attcagccac
      961 atgtgtttcg tttgatttac aagaatggag ttgtgaactc tgtcaaatca gtgccccttg
     1021 tgagaaaagt ttaaatgatc atcttgctgg gaagaaacac caggcgaaga tggaagatct
     1081 taatggcagc aaaaacagca ttgaaaatgg cctaagaaac tttaacaaat ctgttgacaa
     1141 acaacctatg gaaaccatga attcagctaa atgtgtttct tctgatttac aggattggag
     1201 ttgttcactt tgtcaaatca gtgctacttc taagcaaggt ttaaatgatc atcttgctgg
     1261 taagaagcac cactcgaaaa tggaagcttt taatgccagc aaaaacggtg gtgaaatcgg
     1321 cctaggaatg gaggtgtgat ttctgtcaga tcaatgcaaa ttctgagaaa gtttttaata
     1381 atcatcttgc tgggaagaaa caccaggcga aaatggaagc tcttaatggc cgcaaaaacg
     1441 gtggtgaaat cggcccaaga aacactaaga gatctgt
//
LOCUS       XM_071886082            1409 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904143), mRNA.
ACCESSION   XM_071886082
VERSION     XM_071886082.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1409
                     /gene="LOC139904143"
                     /note="uncharacterized LOC139904143; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904143"
     CDS             222..1196
                     /gene="LOC139904143"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742183.1"
                     /db_xref="GeneID:139904143"
                     /translation="MDFNFRRFDSQGQHNPLFPTSSLSSVSPHAFVSDLPVTEVWPIG
                     RSVMSKIRAAIEVEITKERMRSEIIAEEIARQCLRRDMVLERDTMVPHNNEGYASSYM
                     LGPPPFSSHHNRFEHETNMHGRLFSHEDIGRMMSSHEINGGRDASYGRDIWRSEMVLF
                     QRGPESSMIEMIPTYQPKHEEIVSLGQPFGAPVSSLKRKLPPLPSPAGERSSELYYLD
                     TSNKKMMDERRYALCQSSATSEQGLNDHHAGRKHKSNMEALNRGKNGGEIGLGIIKEE
                     RKTERKNKKRKLKPWCRLCQVQTTNEKCMIKHKAGKKHKQNLLKRARA"
     misc_feature    987..>1184
                     /gene="LOC139904143"
                     /note="Splicing factor 3a, subunit 2 [RNA processing and
                     modification]; Region: PRP11; COG5246"
                     /db_xref="CDD:227571"
     misc_feature    1092..1163
                     /gene="LOC139904143"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
ORIGIN      
        1 tcaaaagaaa atgaggggag atctgctatt ttaaaagctc cgtgactggt tatgagttat
       61 gagttacatg agttatgagc cgtataactt tttagttttt ccatgtaaca gtaaccccta
      121 tcaaaacgac tcttgtcact tttctcttca tccaaaaact cgccggaatc cttttctgat
      181 ccgtcaattt cacgtcaata ccctaatttc tttttaacct aatggacttc aactttcgac
      241 gttttgattc acaggggcaa cacaatccat tgtttccgac gtcatcctta tcgtcggttt
      301 cgcctcacgc tttcgtctcc gatcttcctg tcacagaagt atggccgata ggaagaagtg
      361 tgatgtctaa gatcagagcg gcgattgagg tagaaatcac aaaagaaagg atgcggtcag
      421 agataattgc ggaggagata gcacggcaat gtttgagaag ggacatggtt ttggaacgag
      481 atacgatggt accgcataac aatgagggat atgcatcttc gtatatgtta gggccaccac
      541 catttagtag ccaccacaac cggtttgaac acgagactaa tatgcatggt cgactgtttt
      601 ctcatgagga cataggaagg atgatgtcgt cacatgagat aaacggtggt cgtgatgcaa
      661 gctacggtcg tgatatttgg agatctgaga tggttctatt tcagcgggga cctgagtctt
      721 ctatgattga aatgatccct acttatcaac caaaacatga ggagattgtt agcttgggac
      781 agccctttgg tgcacctgtg tctagcttga agcgaaaact accgccactg ccatcaccag
      841 ctggtgaacg ttcaagtgag ctttattatt tagacacttc aaacaagaaa atgatggatg
      901 aacggaggta tgcactctgt caaagcagcg ccacctctga gcaaggttta aatgatcatc
      961 atgctggaag aaaacacaag tcgaatatgg aagctcttaa tagaggcaaa aacggtggtg
     1021 aaattggctt aggaatcatt aaggaagaac ggaagactga acgtaaaaac aagaaacgaa
     1081 agttgaaacc ctggtgcagg ttgtgtcagg ttcaaactac taatgagaaa tgtatgatta
     1141 aacataaggc aggtaaaaag cataagcaaa accttctgaa aagggctcgt gcataaaact
     1201 gaagttacat gaacaaaata ttctgtatgt gcttggagaa gcctgtcctt ttgtcacctg
     1261 ctgcgtgctt caggtgtata ttttttgaca aactccaaag tttgaagatt agtatatgac
     1321 attatgaaag acttcatgtc aatctggttt ggtatttttg atcttcaatt tgtagtttga
     1381 acatggcgtg taagcctttc tagtatgaa
//
LOCUS       XR_011778677             758 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904144), transcript variant X1, ncRNA.
ACCESSION   XR_011778677
VERSION     XR_011778677.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..758
                     /gene="LOC139904144"
                     /note="uncharacterized LOC139904144; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904144"
     ncRNA           1..758
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904144"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904144"
ORIGIN      
        1 ccaaaaacca ttttctcttt gaggcgggag acaaaaagcc ctagataact tatttcttac
       61 ttctattgtt cactttatca tcaccgccac tcacttcatc accgccactc atttcagcgc
      121 cggccactca attacgattt tgaacatacg attgtcgttg tcgtcttctg tatcggcctt
      181 tccaacaaat tcgggttatt aacttccgtc aggtaactta gtatcaacaa caaacaacaa
      241 agaagcgatt gggagtgtgg gtacttcaag aggcttatgg taagtgttgt gctgcaattt
      301 atattcgtcg ccttataaca tttgttgtta tgacctctag atatgtgatg atgatgaaca
      361 aaggtgcagc aggtgcagct gattagtgat tatctgcttg tccaaagcat tgatcaacta
      421 tgttttatag taccggtctt gattaaacat gtaacttttg taaaaccttt gaaggaactt
      481 gcatttaact ctgataatat aatagcaagc atgacatctc aacagtttca agttatcctt
      541 gatgttttga caaatctact cctgtccagg cctctaaaca gctaatctat acaccaaagc
      601 taaaactaga ggcatggcaa aatggagtta aggaattgag tttaatgata taggttagcc
      661 tactagatga aaattacagt cagttgtatt tagtgctact catattaatg tatgaacaaa
      721 actgataaaa ttatgaatat atagcaggtt tattctta
//
LOCUS       XR_011778678             749 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904144), transcript variant X2, ncRNA.
ACCESSION   XR_011778678
VERSION     XR_011778678.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..749
                     /gene="LOC139904144"
                     /note="uncharacterized LOC139904144; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904144"
     ncRNA           1..749
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904144"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904144"
ORIGIN      
        1 ccaaaaacca ttttctcttt gaggcgggag acaaaaagcc ctagataact tatttcttac
       61 ttctattgtt cactttatca tcaccgccac tcacttcatc accgccactc atttcagcgc
      121 cggccactca attacgattt tgaacatacg attgtcgttg tcgtcttctg tatcggcctt
      181 tccaacaaat tcgggttatt aacttccgtc agtatcaaca acaaacaaca aagaagcgat
      241 tgggagtgtg ggtacttcaa gaggcttatg gtaagtgttg tgctgcaatt tatattcgtc
      301 gccttataac atttgttgtt atgacctcta gatatgtgat gatgatgaac aaaggtgcag
      361 caggtgcagc tgattagtga ttatctgctt gtccaaagca ttgatcaact atgttttata
      421 gtaccggtct tgattaaaca tgtaactttt gtaaaacctt tgaaggaact tgcatttaac
      481 tctgataata taatagcaag catgacatct caacagtttc aagttatcct tgatgttttg
      541 acaaatctac tcctgtccag gcctctaaac agctaatcta tacaccaaag ctaaaactag
      601 aggcatggca aaatggagtt aaggaattga gtttaatgat ataggttagc ctactagatg
      661 aaaattacag tcagttgtat ttagtgctac tcatattaat gtatgaacaa aactgataaa
      721 attatgaata tatagcaggt ttattctta
//
LOCUS       XM_071886083            1286 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides OVARIAN TUMOR
            DOMAIN-containing deubiquitinating enzyme 5 (LOC139904145), mRNA.
ACCESSION   XM_071886083
VERSION     XM_071886083.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1286
                     /gene="LOC139904145"
                     /note="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 5; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139904145"
     CDS             73..1026
                     /gene="LOC139904145"
                     /codon_start=1
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 5"
                     /protein_id="XP_071742184.1"
                     /db_xref="GeneID:139904145"
                     /translation="MENTEELVENQTKEIHVEKETREDMLSRHRKEINQIQNKEIALK
                     KAAAKGSKAEQKAKKKQVEEEISRLTNELKQKHVSELASVGYASTTTSGEIKENNIDI
                     LAKAIAGFSVTNQSEHSKPTKTAKRKEKRAQQEAAREQRIQEEQSNIVSDRMVENARL
                     EKKLEPLGLVINEIKPDGHCLYRAVEDQLKIKSSPFYTFQELRKMVADYMRENSSDFL
                     PFFLSETVADGEYDDSVVEKKFESYCNEVESTAAWGGQLELGALTHCLQKHIMIFSGS
                     FPDVEMGKEYKAGDSAGSSIMLSYHKHAFGLGEHYNSVVPV"
     misc_feature    550..1017
                     /gene="LOC139904145"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU5 from plants and similar proteins; Region:
                     OTU_plant_OTU5-like; cd22797"
                     /db_xref="CDD:438618"
     misc_feature    order(610..612,799..801,808..810,829..840,910..912,
                     916..918,970..972,997..1005)
                     /gene="LOC139904145"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:438618"
     polyA_site      1286
                     /gene="LOC139904145"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctttctttgc gcagcgttgc tttgctgctt ccttttcact tcgctattca aaaaccctca
       61 agagttctga taatggaaaa tactgaagaa ttggtggaaa atcagaccaa ggagattcat
      121 gtagaaaaag aaactcgtga ggacatgctt tcaaggcaca ggaaagagat taaccagata
      181 cagaataaag aaattgcatt aaaaaaagca gctgctaaag gaagcaaagc tgaacaaaaa
      241 gctaagaaga aacaagtgga agaagagatc tctcgactca ctaatgagct caaacaaaag
      301 cacgtaagtg aactagcttc agtaggttac gctagtacca ctacaagtgg agaaataaaa
      361 gaaaacaata ttgatatttt agcaaaagcc atagctgggt tctcggttac caaccaaagc
      421 gagcattcaa aacctactaa aactgcaaag aggaaagaaa aacgggccca acaagaagca
      481 gctagagaac aaagaataca agaagaacaa agcaatattg taagtgaccg aatggttgaa
      541 aatgcaagat tagagaaaaa gcttgaaccc cttggtttag tcattaatga aatcaaacca
      601 gacggtcatt gtctctatcg agctgttgaa gatcagttga aaatcaaaag ttctcctttt
      661 tatacatttc aagaacttcg aaaaatggtg gctgattata tgagggaaaa ttcgtccgat
      721 tttcttcctt tttttctatc ggaaactgtt gcagatggag aatatgatga ttctgttgta
      781 gagaagaagt ttgaaagtta ctgcaatgaa gtggagtcaa ctgctgcttg gggcggtcaa
      841 cttgaactcg gtgcattgac tcattgcttg cagaaacata tcatgatatt ttccgggtcg
      901 tttcccgatg tggaaatggg aaaggagtac aaagctggtg actctgcagg ctcaagtatt
      961 atgctttcat accataagca tgcatttggg ctaggtgagc attataattc agtcgtgcct
     1021 gtttgaaagc aaaggtctga gtatgcatat tatactttga agttaaattt atacctttca
     1081 ctttcgtaat tttgttatct ggtggtaaaa ctttggttga tatttaaact aggctttgta
     1141 gtagactctt gatatgccct gctcttgatt ttgacttgta tcacctgtat aatctgattg
     1201 ccatcataaa tactggatgg catgtgaatt atggtgcttc gtttgaattt atgataaata
     1261 aatgggtttt gattttggtt tcgtaa
//
LOCUS       XM_071886084            1633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904146), mRNA.
ACCESSION   XM_071886084
VERSION     XM_071886084.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1633
                     /gene="LOC139904146"
                     /note="uncharacterized LOC139904146; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904146"
     CDS             500..1219
                     /gene="LOC139904146"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742185.1"
                     /db_xref="GeneID:139904146"
                     /translation="MSKKMKAVAFDSSSYEDVVRARLKHQTLIQDYLELQQETDAARN
                     KLEAMKQKKQTLEAEVRFLRRRHKYLLKTKSSAPQEVSSQNLDTAQYRKSNKDKTNSK
                     KVATLRHLPSVSDVNQRGKVYAEKKNIAPSRPPLVFDFHGVDINQRITGNISSIVTEF
                     NQTESGVSVKEAVVQPRAPIFDLNQISMEEEEVQESYEDQRIEQQNDIKLSICRNVGD
                     GSTNRAGKRKISWQDPVALSV"
     misc_feature    <584..>709
                     /gene="LOC139904146"
                     /note="Cell division protein FtsB [Cell cycle control,
                     cell division, chromosome partitioning]; Region: FtsB;
                     COG2919"
                     /db_xref="CDD:442163"
ORIGIN      
        1 atcatgaaaa aatagagaaa gaaagaagat gtcttcaaaa tccaaccaaa cccacctcac
       61 tcagttatca ttacatccat ccatacacac aaaaacaaaa acaaaatttg gcatacagat
      121 caattaatta tggttgttcc acaattaccc ttctgcaacc ccccaaaatt ctccatcttc
      181 atcacttcat tgtctaccaa accaaccgaa ttatatgggc tttttggggc tttctctttg
      241 gtcagagttt catcaccatt aacacagaaa acaggaaaaa gcaagaaact tctcacccca
      301 cacacacaca aacccattct cttctttctt taagtatttc ttttcaacac cccttctatc
      361 cattataatt atatatctat ctctatcatt tttctttgaa gtctctcttt tttatttcta
      421 tttatataat atatatttat atttatcata tcatattgat ttctttatca atttgggatt
      481 tcaagaaagt tgagatctga tgagtaagaa gatgaaagcg gttgcttttg attcatcttc
      541 ttatgaagat gttgttaggg ctagacttaa acatcaaacc cttatccaag attacctaga
      601 gttgcaacaa gaaacagatg ctgcaagaaa caaattggaa gccatgaagc aaaagaaaca
      661 gactttagaa gctgaagtga gattcttgag gcgtagacac aaatatctac tgaaaacgaa
      721 atcatcggct ccacaagaag tgagctcaca aaatttagat acagcccaat acaggaaaag
      781 caataaagac aagacgaact ctaaaaaggt ggcaactttg cgccatttgc cctcggtttc
      841 tgatgtaaac caaaggggaa aagtgtatgc tgagaagaaa aacattgctc caagtagacc
      901 acctcttgtt tttgacttcc atggtgttga tataaatcaa aggattactg ggaacatttc
      961 gtctatagtg accgaattca accagacaga aagcggtgtt agtgttaaag aagccgtcgt
     1021 tcaacctcga gctcctatat ttgacttgaa ccagatttcg atggaagaag aagaagttca
     1081 ggagagctat gaggatcaaa ggatagaaca acaaaatgat attaagcttt caatctgtag
     1141 aaatgtgggt gatggttcga caaatcgagc aggaaagagg aagatctcat ggcaagatcc
     1201 tgtggcttta agcgtatgaa gtacgaaact aataaaagct aagttagatg gattaggtca
     1261 aagtctatac tttgacgaag aatttgcatt tgagttggtt atcgggtatg gttacattga
     1321 tcctttgata gtaattattc aatggttaaa aaaagtgtat tttgtaaaga gaactttgtg
     1381 tattagtgac ttccttttga cacagagacg atttgaatta taaagaatca ttatgatgta
     1441 tatggctgat caatgccttg tctgtcctct atggctgagt aaacaagatg agctttggtt
     1501 ttaagtttct tgatttgttt gtttaatcct gatcttgatg agtaagtaga tattgtctat
     1561 ttgaagcatg tttaccatgg taaattattt tttgcttatg tttttgcatt aagttgatta
     1621 cttgattgaa ttt
//
LOCUS       XM_071886085            1804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine carboxypeptidase
            24-like (LOC139904147), transcript variant X1, mRNA.
ACCESSION   XM_071886085
VERSION     XM_071886085.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1804
                     /gene="LOC139904147"
                     /note="serine carboxypeptidase 24-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904147"
     CDS             101..1561
                     /gene="LOC139904147"
                     /codon_start=1
                     /product="serine carboxypeptidase 24-like isoform X1"
                     /protein_id="XP_071742186.1"
                     /db_xref="GeneID:139904147"
                     /translation="MLGQRRKLILIAVMNLQQLFVMCLFLITLITTVSSLTQEQENDR
                     ITALPGQPAVEFSQFSGYVTVHKKHGRGLFYWLTEAVNPQDKPLVLWLNGVFYITEEF
                     LSFIWLLCERPGCSSIAYGASEEIGPFRIHKNASSLYLNKYSWNLEANILFLESPAGV
                     GFSYTNTSTELRNSGDKRTARDALKFLKEWMTRFPQYKNRDFYISGESYAGHYVPQLA
                     KKIHNYNKNHPGSFINLKGFIVGNAVTDNQYDNIGTVDYWWSHSIISDTAYKSIKSSC
                     NFKSTKYTEKCDNAIDYAWNNEFGEIDQYSIYTPSCNKSSVNVTSTRLKNSLMRRRVS
                     GYDPCIEKNAEKYFNRPEVQQAMHANNTGIAYKWTACSDELLENWKDSQFSMLPTYKK
                     LIAAGYRIWVFSGDTDSVVPVTATRMSLSHLDLTVKTPWYPWYSKGQVAGWTEVYEGL
                     TFATVRGAGHEVPLFQPKRAFLLFQRFLAGKNLPKS"
     misc_feature    245..1540
                     /gene="LOC139904147"
                     /note="Serine carboxypeptidase; Region: Peptidase_S10;
                     pfam00450"
                     /db_xref="CDD:459815"
ORIGIN      
        1 ccgaattaac ttataatttc cttccttctc ttcctctata taacgtatag acatcacaac
       61 ctagctagag ctaggtgggg agaaaaaaga tcagagataa atgctaggac aaagaagaaa
      121 attaatacta attgctgtta tgaatctgca gcagctattt gttatgtgtt tatttctcat
      181 aacactaatc accacagttt catcactaac ccaagaacaa gaaaatgatc gaatcactgc
      241 attaccaggg caaccggcag ttgagttttc gcaattttcg ggctatgtta cggtgcacaa
      301 gaaacatggt agaggccttt tttactggtt aactgaagca gtcaatccac aagataagcc
      361 tcttgttctt tggctcaatg gagtgtttta tatcactgaa gaatttcttt ctttcatttg
      421 gcttctgtgt gaacgtccag gttgctcatc aatagcatat ggagcatcag aagaaattgg
      481 accattcaga attcacaaga atgcttcttc cctttatctc aataaatatt cctggaattt
      541 agaggcaaat attctattcc tcgaatctcc tgctggtgtc ggcttctcat ataccaacac
      601 gagtaccgaa cttagaaact cgggtgacaa aagaaccgcc agggatgcac ttaagttcct
      661 caaagaatgg atgacaagat ttccacaata caaaaacaga gatttctata tatctggaga
      721 aagttatgca ggtcattatg ttcctcaact agccaagaaa attcataact ataacaagaa
      781 tcacccgggt tcattcatca atctaaaagg gttcattgta gggaatgcag taacagataa
      841 ccaatatgat aacattggga cagtagatta ttggtggagt cattcgatta tatcagacac
      901 agcctacaaa tcaatcaaga gttcgtgcaa tttcaaatct acaaaataca ctgaaaaatg
      961 tgataatgca atcgattatg catggaataa tgagtttgga gagattgatc aatacagtat
     1021 ttacacacct tcttgtaaca aatcatcggt taatgttacg tcaacaagac tcaagaatag
     1081 tcttatgcgt agacgagttt caggctatga tccttgcatt gaaaagaacg cagagaagta
     1141 ttttaaccgg cctgaggtac aacaggcaat gcacgcaaac aatacaggga ttgcgtataa
     1201 gtggactgct tgcagtgatg aacttttgga aaactggaag gattctcagt tttcgatgct
     1261 accaacttac aagaaactaa ttgctgctgg ttatcgaata tgggtgttta gtggtgatac
     1321 ggattcggtt gtaccggtta ctgccacaag gatgtcacta agccatctag atctcacggt
     1381 caagacaccg tggtacccct ggtactcgaa aggccaggta gcaggatgga ctgaagttta
     1441 tgaaggacta acctttgcaa cggttcgagg agctggtcat gaagtccctt tgttccagcc
     1501 aaaaagagcg tttcttctat tccagcggtt cttggcaggc aaaaacttac caaaatcatg
     1561 aaaaacacta gcaattttag aagtaatatg atcaacctgc aacaaattgt gggttagtaa
     1621 gtataggcat gattgattca gtcaggtaga tcgaccgtta tcctgcttgt tactcaaatg
     1681 catcaaacat ttgtcaatga atttcacatc cctggtatat gtttccattt tttctttttt
     1741 cacacatata acttcacatt gttcccacat tgtaagagca taaagtctaa tactagtact
     1801 attg
//
LOCUS       XM_071886086            1753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine carboxypeptidase
            24-like (LOC139904147), transcript variant X2, mRNA.
ACCESSION   XM_071886086
VERSION     XM_071886086.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1753
                     /gene="LOC139904147"
                     /note="serine carboxypeptidase 24-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 39 Proteins"
                     /db_xref="GeneID:139904147"
     CDS             101..1510
                     /gene="LOC139904147"
                     /codon_start=1
                     /product="serine carboxypeptidase 24-like isoform X2"
                     /protein_id="XP_071742187.1"
                     /db_xref="GeneID:139904147"
                     /translation="MLGQRRKLILIAVMNLQQLFVMCLFLITLITTVSSLTQEQENDR
                     ITALPGQPAVEFSQFSGYVTVHKKHGRGLFYWLTEAVNPQDKPLVLWLNGGPGCSSIA
                     YGASEEIGPFRIHKNASSLYLNKYSWNLEANILFLESPAGVGFSYTNTSTELRNSGDK
                     RTARDALKFLKEWMTRFPQYKNRDFYISGESYAGHYVPQLAKKIHNYNKNHPGSFINL
                     KGFIVGNAVTDNQYDNIGTVDYWWSHSIISDTAYKSIKSSCNFKSTKYTEKCDNAIDY
                     AWNNEFGEIDQYSIYTPSCNKSSVNVTSTRLKNSLMRRRVSGYDPCIEKNAEKYFNRP
                     EVQQAMHANNTGIAYKWTACSDELLENWKDSQFSMLPTYKKLIAAGYRIWVFSGDTDS
                     VVPVTATRMSLSHLDLTVKTPWYPWYSKGQVAGWTEVYEGLTFATVRGAGHEVPLFQP
                     KRAFLLFQRFLAGKNLPKS"
     misc_feature    245..1489
                     /gene="LOC139904147"
                     /note="Serine carboxypeptidase; Region: Peptidase_S10;
                     pfam00450"
                     /db_xref="CDD:459815"
ORIGIN      
        1 ccgaattaac ttataatttc cttccttctc ttcctctata taacgtatag acatcacaac
       61 ctagctagag ctaggtgggg agaaaaaaga tcagagataa atgctaggac aaagaagaaa
      121 attaatacta attgctgtta tgaatctgca gcagctattt gttatgtgtt tatttctcat
      181 aacactaatc accacagttt catcactaac ccaagaacaa gaaaatgatc gaatcactgc
      241 attaccaggg caaccggcag ttgagttttc gcaattttcg ggctatgtta cggtgcacaa
      301 gaaacatggt agaggccttt tttactggtt aactgaagca gtcaatccac aagataagcc
      361 tcttgttctt tggctcaatg gaggtccagg ttgctcatca atagcatatg gagcatcaga
      421 agaaattgga ccattcagaa ttcacaagaa tgcttcttcc ctttatctca ataaatattc
      481 ctggaattta gaggcaaata ttctattcct cgaatctcct gctggtgtcg gcttctcata
      541 taccaacacg agtaccgaac ttagaaactc gggtgacaaa agaaccgcca gggatgcact
      601 taagttcctc aaagaatgga tgacaagatt tccacaatac aaaaacagag atttctatat
      661 atctggagaa agttatgcag gtcattatgt tcctcaacta gccaagaaaa ttcataacta
      721 taacaagaat cacccgggtt cattcatcaa tctaaaaggg ttcattgtag ggaatgcagt
      781 aacagataac caatatgata acattgggac agtagattat tggtggagtc attcgattat
      841 atcagacaca gcctacaaat caatcaagag ttcgtgcaat ttcaaatcta caaaatacac
      901 tgaaaaatgt gataatgcaa tcgattatgc atggaataat gagtttggag agattgatca
      961 atacagtatt tacacacctt cttgtaacaa atcatcggtt aatgttacgt caacaagact
     1021 caagaatagt cttatgcgta gacgagtttc aggctatgat ccttgcattg aaaagaacgc
     1081 agagaagtat tttaaccggc ctgaggtaca acaggcaatg cacgcaaaca atacagggat
     1141 tgcgtataag tggactgctt gcagtgatga acttttggaa aactggaagg attctcagtt
     1201 ttcgatgcta ccaacttaca agaaactaat tgctgctggt tatcgaatat gggtgtttag
     1261 tggtgatacg gattcggttg taccggttac tgccacaagg atgtcactaa gccatctaga
     1321 tctcacggtc aagacaccgt ggtacccctg gtactcgaaa ggccaggtag caggatggac
     1381 tgaagtttat gaaggactaa cctttgcaac ggttcgagga gctggtcatg aagtcccttt
     1441 gttccagcca aaaagagcgt ttcttctatt ccagcggttc ttggcaggca aaaacttacc
     1501 aaaatcatga aaaacactag caattttaga agtaatatga tcaacctgca acaaattgtg
     1561 ggttagtaag tataggcatg attgattcag tcaggtagat cgaccgttat cctgcttgtt
     1621 actcaaatgc atcaaacatt tgtcaatgaa tttcacatcc ctggtatatg tttccatttt
     1681 ttcttttttc acacatataa cttcacattg ttcccacatt gtaagagcat aaagtctaat
     1741 actagtacta ttg
//
LOCUS       XM_071886087            1564 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine carboxypeptidase
            24-like (LOC139904147), transcript variant X3, mRNA.
ACCESSION   XM_071886087
VERSION     XM_071886087.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1564
                     /gene="LOC139904147"
                     /note="serine carboxypeptidase 24-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904147"
     CDS             101..1321
                     /gene="LOC139904147"
                     /codon_start=1
                     /product="serine carboxypeptidase 24-like isoform X3"
                     /protein_id="XP_071742188.1"
                     /db_xref="GeneID:139904147"
                     /translation="MLGQRRKLILIAVMNLQQLFVMCLFLITLITTVSSLTQEQENDR
                     ITALPGQPAVEFSQFSGYVTVHKKHGRGLFYWLTEAVNPQDKPLVLWLNGGPGCSSIA
                     YGASEEIGPFRIHKNASSLYLNKYSWNLGHYVPQLAKKIHNYNKNHPGSFINLKGFIV
                     GNAVTDNQYDNIGTVDYWWSHSIISDTAYKSIKSSCNFKSTKYTEKCDNAIDYAWNNE
                     FGEIDQYSIYTPSCNKSSVNVTSTRLKNSLMRRRVSGYDPCIEKNAEKYFNRPEVQQA
                     MHANNTGIAYKWTACSDELLENWKDSQFSMLPTYKKLIAAGYRIWVFSGDTDSVVPVT
                     ATRMSLSHLDLTVKTPWYPWYSKGQVAGWTEVYEGLTFATVRGAGHEVPLFQPKRAFL
                     LFQRFLAGKNLPKS"
     misc_feature    245..1300
                     /gene="LOC139904147"
                     /note="Serine carboxypeptidase; Region: Peptidase_S10;
                     pfam00450"
                     /db_xref="CDD:459815"
ORIGIN      
        1 ccgaattaac ttataatttc cttccttctc ttcctctata taacgtatag acatcacaac
       61 ctagctagag ctaggtgggg agaaaaaaga tcagagataa atgctaggac aaagaagaaa
      121 attaatacta attgctgtta tgaatctgca gcagctattt gttatgtgtt tatttctcat
      181 aacactaatc accacagttt catcactaac ccaagaacaa gaaaatgatc gaatcactgc
      241 attaccaggg caaccggcag ttgagttttc gcaattttcg ggctatgtta cggtgcacaa
      301 gaaacatggt agaggccttt tttactggtt aactgaagca gtcaatccac aagataagcc
      361 tcttgttctt tggctcaatg gaggtccagg ttgctcatca atagcatatg gagcatcaga
      421 agaaattgga ccattcagaa ttcacaagaa tgcttcttcc ctttatctca ataaatattc
      481 ctggaattta ggtcattatg ttcctcaact agccaagaaa attcataact ataacaagaa
      541 tcacccgggt tcattcatca atctaaaagg gttcattgta gggaatgcag taacagataa
      601 ccaatatgat aacattggga cagtagatta ttggtggagt cattcgatta tatcagacac
      661 agcctacaaa tcaatcaaga gttcgtgcaa tttcaaatct acaaaataca ctgaaaaatg
      721 tgataatgca atcgattatg catggaataa tgagtttgga gagattgatc aatacagtat
      781 ttacacacct tcttgtaaca aatcatcggt taatgttacg tcaacaagac tcaagaatag
      841 tcttatgcgt agacgagttt caggctatga tccttgcatt gaaaagaacg cagagaagta
      901 ttttaaccgg cctgaggtac aacaggcaat gcacgcaaac aatacaggga ttgcgtataa
      961 gtggactgct tgcagtgatg aacttttgga aaactggaag gattctcagt tttcgatgct
     1021 accaacttac aagaaactaa ttgctgctgg ttatcgaata tgggtgttta gtggtgatac
     1081 ggattcggtt gtaccggtta ctgccacaag gatgtcacta agccatctag atctcacggt
     1141 caagacaccg tggtacccct ggtactcgaa aggccaggta gcaggatgga ctgaagttta
     1201 tgaaggacta acctttgcaa cggttcgagg agctggtcat gaagtccctt tgttccagcc
     1261 aaaaagagcg tttcttctat tccagcggtt cttggcaggc aaaaacttac caaaatcatg
     1321 aaaaacacta gcaattttag aagtaatatg atcaacctgc aacaaattgt gggttagtaa
     1381 gtataggcat gattgattca gtcaggtaga tcgaccgtta tcctgcttgt tactcaaatg
     1441 catcaaacat ttgtcaatga atttcacatc cctggtatat gtttccattt tttctttttt
     1501 cacacatata acttcacatt gttcccacat tgtaagagca taaagtctaa tactagtact
     1561 attg
//
LOCUS       XR_011778679             683 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904148), ncRNA.
ACCESSION   XR_011778679
VERSION     XR_011778679.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..683
                     /gene="LOC139904148"
                     /note="uncharacterized LOC139904148; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904148"
     ncRNA           1..683
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904148"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904148"
ORIGIN      
        1 ctataactcc gctttattaa ccctaaccct cttcacagtc ggcctgcttt gtcacgaact
       61 taacggccca tataatcaac caccgtcgct gctacaccca ccgccatcga tgtccttgca
      121 gttctcaccg tcatgtccgc tgatattgta tacttctccg atccgatggt caaccaaatc
      181 gtaactctat ttctcaatct caacctactg tgttatttgt ggagggttgg atgaaaatgc
      241 tctattgttg aattcagaca tgggcgaacg ccgattattg tatatcagtt ttccgttccc
      301 gttgagagtc aaggttttgg aaagccatat gcaattcaac aaaaaggaaa ttgatgttat
      361 tacaacaagt tcaattagga agataggtac gaggctccaa gagaaaatag gagtgaaaga
      421 cattccaaga ttaggttcct agagtagaca caatcaccta aagatcgtgg tgccaaaagc
      481 ttctgatgtt cttgcaacca gaacaagaaa acaagatttt caagagtttc cgaggcttct
      541 atgtaatcga gttttggtat taaaagtatt tgataatcaa ccttttttgt attaatgtgt
      601 atattttgtt gagcatttgt ggatggtatt ggtttctaat aacaataaca tatgcacatt
      661 ataataggat tattactttt tca
//
LOCUS       XM_071886088             857 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides early nodulin-like protein
            14 (LOC139904149), mRNA.
ACCESSION   XM_071886088
VERSION     XM_071886088.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..857
                     /gene="LOC139904149"
                     /note="early nodulin-like protein 14; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904149"
     CDS             75..668
                     /gene="LOC139904149"
                     /codon_start=1
                     /product="early nodulin-like protein 14"
                     /protein_id="XP_071742189.1"
                     /db_xref="GeneID:139904149"
                     /translation="MAVTRCSLWFVSLSLVMFLMSLGASNATEFEVGGKGNSWRVPTS
                     ATGLNDWAEKERFKIGDVLVFKYDPKADSVLEVEEGDYKKCIKTKPIKEHKDGNTKIT
                     INESGAFYFISGANGHCEKGEKLEVKVLSLKHSSMAPSPSPKVAPSARPVPVSPPTEA
                     PVVAPAIAPASGVAGSGVSVAVYSSMVVATLVGLAMA"
     misc_feature    156..464
                     /gene="LOC139904149"
                     /note="Early nodulin-like protein (OsENODL1) and similar
                     proteins; Region: OsENODL1_like; cd11019"
                     /db_xref="CDD:259905"
     misc_feature    435..>650
                     /gene="LOC139904149"
                     /note="putative acetyl-CoA carboxylase biotin carboxyl
                     carrier protein subunit; Validated; Region: PRK05641"
                     /db_xref="CDD:235540"
ORIGIN      
        1 gataaacttt cttttacatt aaaaaataaa aacatttgca ttttgattta gtgttgttat
       61 tcttagagat cgaaatggct gttactagat gttctttatg gtttgtttca ttgtctttgg
      121 tcatgttttt gatgagttta ggtgcctcga atgcaaccga gtttgaagtt ggtggaaaag
      181 ggaactcgtg gcgcgttcct acatcggcta ccgggttgaa tgactgggct gaaaaagaac
      241 ggtttaagat cggagatgtg cttgtgttca aatatgaccc gaaggccgat tcagtcctag
      301 aagtcgaaga aggtgattac aaaaaatgta tcaaaacaaa gcctatcaaa gagcacaaag
      361 atggcaacac aaagatcaca atcaatgaat caggtgcatt ctattttatt agcggtgcta
      421 atggacactg cgagaagggt gaaaagcttg aagtcaaggt cttgtcactt aaacatagtt
      481 ccatggctcc ttcaccgtct cctaaagttg ctccatctgc tcgtccagtt ccagtttcgc
      541 ccccaaccga agcccctgtt gtagccccag ctattgctcc agctagtggc gtggctgggt
      601 cgggtgttag tgttgctgtt tattcttcaa tggttgtggc tactttggta ggacttgcta
      661 tggcttaaga aacgtgtttt tttttcattt atgatgtttt tttaagaatt ttgtttttag
      721 gtgtgatttg gattgtgtta gttaaacttt gcattatctg tggtgatttg gttttaagac
      781 tgtggtttat gtatgttttt tctatgttcg ttcttggtct tttaaagtaa ttggtctatt
      841 ttctatcatt aatgata
//
LOCUS       XM_071886089            2295 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transmembrane 9 superfamily
            member 8-like (LOC139904150), mRNA.
ACCESSION   XM_071886089
VERSION     XM_071886089.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2295
                     /gene="LOC139904150"
                     /note="transmembrane 9 superfamily member 8-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 37 Proteins"
                     /db_xref="GeneID:139904150"
     CDS             137..2056
                     /gene="LOC139904150"
                     /codon_start=1
                     /product="transmembrane 9 superfamily member 8-like"
                     /protein_id="XP_071742190.1"
                     /db_xref="GeneID:139904150"
                     /translation="MANRSNLGFHLWICVFLLLSVHGLSFYLPGVAPQDFFKGDKLRV
                     KVNKLASTKTQLPYSYYSIPYCRPNKIVDSAENLGEVLRGDRIENSPYEFQMRVPQMC
                     NVVCRIVLNEKTAKEFKEKIDDEYRVNMILDNLPLVVPMTRFEQNSPVLYQHGYFVGR
                     KVQYAGTKEEKYFINNHLTFTVKYHKDIQTDSARIVGFEVNAFSVKHQYDGEWTDKTR
                     LSTCDAHAKRTVTSSDAPQEVENKKEIIFTYDVDFQESDIKWASRWDTYLLMADDQVH
                     WFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNQLETQEEAQEETGWKLVHGDVFRP
                     PTNSDLLCVYVGTGVQFFGMILIAMIFAVLGFLSPSNRGGLMTALLLLWVLMGIFGGY
                     ASARLYKTFKGTEWKSITLKTAFMFPGIAFAIFFVLNALIWGEKSSGAVPFGTMFTLV
                     FLWFGISVPLVFVGSYIGFKKPAIEDPVKTNKIPRQIPEQAWYMSSAFSILIGGILPF
                     GAVFIELFFILTSIWLQQFYYIFGFLFIVFIILIVTCAEITIVLCYFQLCSEDYLWWW
                     RSYLTSGSSSLYLFLYTIFYFFTKLNITKPVSGILYFGYMLIASYAFFVLTGTIGFYA
                     CFWFTRLIYSSVKID"
     misc_feature    305..1918
                     /gene="LOC139904150"
                     /note="Endomembrane protein 70; Region: EMP70; pfam02990"
                     /db_xref="CDD:460774"
ORIGIN      
        1 caaacaactg tagatacata ctacaaatta tatacataca gaattctata atagaaactg
       61 agatattcat aatacagatc taaacaccta gatctgtaat cttccatttc ccaatttcac
      121 ttttaaattt catgatatgg ctaatcgatc gaatttaggg tttcatttat ggatctgtgt
      181 ttttcttctg ttatcagtcc acggattatc gttctatctt cctggtgttg ctccacagga
      241 tttctttaag ggagataaac tgagggtaaa agtaaacaag ttggcttcta ccaaaactca
      301 actcccttat tcttactatt ccatccctta ttgtcgccca aataaaatag ttgacagtgc
      361 tgagaatcta ggcgaagttc ttcgcggtga tcgtatagaa aattctccct atgagtttca
      421 aatgcgagtg ccacagatgt gcaatgttgt atgtcgcatt gtgctaaatg agaaaactgc
      481 taaagagttt aaagagaaga tagatgatga gtatagagtc aacatgatat tggacaatct
      541 acctttggtt gttccaatga caaggtttga acagaattca cctgttttat atcagcatgg
      601 atattttgtt ggtcgcaaag tacagtatgc aggaacaaag gaagaaaaat attttatcaa
      661 caatcatttg acattcacag tcaagtatca caaggacatt caaacagact ctgcaagaat
      721 cgtaggattt gaagttaatg ctttcagtgt gaagcatcag tatgatggag agtggactga
      781 caagacccgc cttagtacat gtgatgctca tgcaaaaaga acggtcacaa gctctgatgc
      841 tcctcaagag gttgaaaata agaaggaaat catcttcact tatgatgtcg atttccagga
      901 gagtgatatc aaatgggcat cccgatggga cacttatctt ctaatggcag atgatcaagt
      961 tcactggttc tccattgtta actccctaat gattgtccta ttcctctcgg gtatggtggc
     1021 tatgatcatg ttaagaacac tttatcgtga catctccaaa tacaaccaat tagaaacaca
     1081 agaagaagcc caagaagaaa ccggctggaa acttgttcat ggagatgttt tccgtccacc
     1141 aaccaactca gacttgctct gcgtttatgt tggaaccggt gttcaattct tcggtatgat
     1201 attgatcgcc atgattttcg ctgtactcgg gtttctctcc ccgtctaacc gcggtgggct
     1261 catgacagcc ctacttttac tctgggtgct catgggtatc tttggtgggt acgcatcagc
     1321 ccgtctttat aaaacattta aaggaaccga atggaaatca atcactctca aaacagcttt
     1381 catgttcccg ggaattgcgt tcgctatttt ctttgtactc aacgctctaa tttggggcga
     1441 gaaatcctca ggtgctgtcc cgtttggtac catgtttacg ttggtgtttt tatggtttgg
     1501 gatttcggtt ccacttgttt tcgtgggaag ttatattggg tttaagaaac ctgcaattga
     1561 agatccggtt aaaaccaata aaataccaag acaaatacca gaacaagctt ggtacatgag
     1621 ctcggccttt tctatactta tcggcggaat acttccgttt ggtgcagtct ttatcgagct
     1681 ctttttcata ttgacctcaa tttggttaca gcagttttac tacatcttcg gtttcctttt
     1741 tattgtgttt atcatattaa tcgtgacgtg tgccgagatc acgattgtgt tatgctactt
     1801 tcagctttgt agtgaggact atctttggtg gtggagatca tatctaacat caggttcttc
     1861 gtctttatat ctttttctat acacgatttt ctacttcttc acaaagctca atatcacgaa
     1921 gccggtttct ggtattttgt acttcgggta catgttaatt gcatcatatg cgttctttgt
     1981 actcactggt acaattggtt tttatgcatg cttctggttc acgaggctca tttactcttc
     2041 ggtgaagatt gattgatcaa tgaaagggaa acgattagta atatgtagtt ttttgatggt
     2101 ttataggacg ttaggctact ttactgatgt ttagttatac aaattgttcc ccaaatcggg
     2161 cctttttggt acttggattt tgttggatgg atttatcgta tcctccctac ataatatgta
     2221 tgtagagatt aaggaggatt atcaaggaat cttttttcat attgttgagt acgtatgttt
     2281 atttcatgga agatg
//
LOCUS       XM_071886090            3147 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin carboxyl-terminal
            hydrolase 23-like (LOC139904151), transcript variant X1, mRNA.
ACCESSION   XM_071886090
VERSION     XM_071886090.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3147
                     /gene="LOC139904151"
                     /note="ubiquitin carboxyl-terminal hydrolase 23-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139904151"
     CDS             149..2920
                     /gene="LOC139904151"
                     /codon_start=1
                     /product="ubiquitin carboxyl-terminal hydrolase 23-like
                     isoform X1"
                     /protein_id="XP_071742191.1"
                     /db_xref="GeneID:139904151"
                     /translation="MQSTIHPQRKNFKLFKPQSIMATKALSLIDNNNNTIIKHENPDA
                     ESTDKSPFRRIEFHLARKPFTGFSNGSCDGSFRLETLNPTTSSSKSTQQSVGSGCVNG
                     DGSSGKKTVALEMENGLDPELSFGITFKRIGAGLENLGNTCFLNSVLQCLTYTEPLAA
                     YLQSGKHQSSCRKAGFCALCAIQKHVSRALQLSGRSLAPKDLVSNLRCISRTFRNSRQ
                     EDAHEYMVNLLESMHKCCLPNGVPSESQSAYDRSLVHKIFGGQLRSQVKCMQCNYCSD
                     KFDPFLDLSLEILRADNLYKAFANFTAKEQLDGGAKQYQCQQCKHKVKALKQLTIYKA
                     PNVLTIHLKRFGSHMSGQKIDKKIHFSSTLDLKPFVTGPYEGDLRYTLYGVLVHAGWS
                     THSGHYYCFVRTSSGMWYSLDDNRVIQVSEKKVFEQKAYMLFYFKDRQNFPLKKTTDA
                     AHQKEKVAVNGTVKVSIASKQSQMKIGLSNGFSPVAPKEAKTNTILSNGSLNGHKGSA
                     PAKTMSNGFSADAPKEAQVKTLVTACTERSGLTPVAPKETQMKTSENDRSLNGYQSPV
                     NVDTVRNGFSTGAQEQTQKTEASAPKIAAKSNLENSQKGETGDNSVQAALTVSCSNPI
                     TTPVDTVNKTLDEVNDKEIAVGDGQIKEVSTKLPDLSGLQEMETSVEKKSRCKKSHKR
                     AKNLLKCSVISMKFSSNILMGTSLNKRKKKKRKQSKRIKSLEQENSFNEGPSSSDKSE
                     AQVAVKPLFANASKENSINESPSSSDKVNAQKAVDPFESGTKHRDNKDCAVLATSECN
                     GVSNGSQSSTQKDLVHMLTRGMDDRYVPRWDDDDDSTPYQRRETKRELTIGYIGDEWD
                     EEYDRGKRKKVRMSQTEFDGKNPFQNIANERLKSHAEKQTLINRSPLITVKNKQFKKS
                     RSGNGPFRI"
     misc_feature    545..1453
                     /gene="LOC139904151"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; Region:
                     Peptidase_C19E; cd02661"
                     /db_xref="CDD:239126"
     misc_feature    order(560..562,575..577,1337..1339,1388..1390)
                     /gene="LOC139904151"
                     /note="active site"
                     /db_xref="CDD:239126"
     polyA_site      3147
                     /gene="LOC139904151"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accacgtcaa agtagggttt atacactcgg ttccagcttc atactttctt cctcgttctc
       61 cccctacacc tccaaagtac ccatttgaaa tccatcctaa aaactcaaaa ccccaaaatt
      121 cctcaaattc catattaaat cgatctttat gcaatcaacc atacacccac aacgcaaaaa
      181 tttcaaactc tttaaacccc aatcaattat ggctactaaa gctttaagct taattgataa
      241 taacaataat actatcatca aacatgaaaa cccagatgct gaatccaccg ataaatcccc
      301 ctttagaagg attgaatttc atctagcaag aaaacccttc actggattta gcaacggcag
      361 ttgtgacggt agttttcggc tcgaaacact taatccgacg acatctagct ctaaaagtac
      421 ccagcagagt gtcgggtcgg gttgtgtcaa tggtgatggg tcatcgggta agaaaacggt
      481 agcgttggag atggaaaatg ggctggatcc ggaactcagt tttgggatta cttttaaaag
      541 aattggcgct ggtttggaga atcttggtaa tacttgcttt cttaattcag tactgcaatg
      601 tttaacttat acagagcctt tagctgcata tttacagagc ggaaaacatc aaagtagttg
      661 tcggaaagct ggattttgtg ctttatgtgc tatccagaag catgtcagcc gtgcactaca
      721 attatcaggc agatcattgg cacctaagga tcttgtttcc aatttacgct gcatatcaag
      781 gacgtttagg aattcaaggc aggaggatgc acatgaatat atggtcaatt tattggaatc
      841 gatgcacaag tgttgtttgc ctaatggagt gcctagtgaa tcacaaagtg cttatgatag
      901 aagtttggtc cacaagatat tcggtggcca acttcgtagt caggtgaaat gcatgcagtg
      961 taactattgt tctgacaagt tcgatccttt cttggattta agtcttgaaa tcttgagagc
     1021 tgacaatttg tacaaggctt ttgctaattt tactgctaaa gaacagttag acggtggggc
     1081 taaacaatac caatgccagc aatgcaaaca taaagtcaaa gctcttaaac aacttacaat
     1141 ctacaaagcc ccaaatgttc taactattca cctcaaacgc tttggttccc atatgtcggg
     1201 ccaaaagatt gataagaaga tccatttcag ttccactctg gatttaaaac cttttgtgac
     1261 gggtccatat gaaggggatt taaggtacac tctatatggt gttttggttc atgccggttg
     1321 gagcacacat tctggtcatt actactgctt tgttcggaca tctagtggca tgtggtattc
     1381 acttgacgac aatagggtta ttcaagtgag tgaaaagaaa gtttttgagc aaaaagccta
     1441 catgctattt tatttcaaag acagacaaaa ttttccgtta aagaagacga cagatgctgc
     1501 ccatcagaaa gagaaggttg cggtgaatgg tacagtcaaa gtctccatcg catcaaaaca
     1561 atcccaaatg aaaattggtt taagtaatgg gttcagtccg gttgcaccaa aagaagccaa
     1621 aacgaacacc attcttagta acgggtcatt aaatggccac aaaggttcag ctcctgctaa
     1681 aaccatgagc aatgggttca gtgctgatgc accaaaagag gcccaagtaa aaactttggt
     1741 tactgcttgt actgagagaa gcgggttaac tcctgttgca ccaaaagaga cacaaatgaa
     1801 gactagtgaa aatgatagat cattaaacgg ttaccagtct ccggttaatg ttgatacggt
     1861 gagaaatggg ttcagtactg gcgcacaaga acagacccaa aagacagaag cttcagctcc
     1921 aaaaattgcc gccaaatcaa atttggagaa ctcccaaaag ggcgaaactg gagataatag
     1981 tgttcaagct gctttaacag tcagttgcag caatccgatt actactcctg tagatactgt
     2041 gaataaaaca ctggacgagg tcaatgataa ggaaattgct gtgggtgatg gtcaaatcaa
     2101 ggaggtgtct actaaattgc ctgacttatc aggtttacaa gaaatggaaa catctgtgga
     2161 gaagaaatcc cgttgcaaga aaagccataa aagagcgaaa aaccttttga agtgttcggt
     2221 aataagcatg aaattcagct caaacattct tatggggaca tcattaaaca agaggaagaa
     2281 aaagaagcgt aagcaaagca aacggatcaa gagtcttgaa caagaaaact ccttcaatga
     2341 aggtccatct tcatccgata aatctgaagc acaagtggcg gtaaaaccat tatttgcaaa
     2401 tgcatccaaa gaaaactcca tcaacgaaag tccatcttct tcggacaaag ttaacgcaca
     2461 gaaggccgta gatccgttcg aaagcggaac taaacatagg gataataaag attgtgctgt
     2521 gcttgcaaca agtgagtgta atggtgtctc aaacggaagt caatcgtcca cacaaaagga
     2581 tttggttcat atgcttacaa gaggcatgga tgatagatat gtccctcgtt gggatgatga
     2641 tgatgattca acaccatatc agagaagaga aacaaaacgt gaactcacca ttggatacat
     2701 tggagatgaa tgggacgaag aatatgacag aggaaagaga aagaaagtac ggatgtcaca
     2761 aactgaattt gatgggaaga atccgttcca aaatattgca aacgagaggt taaaatcgca
     2821 tgcagaaaaa caaactttga ttaatagatc ccctttaata acggtgaaaa acaagcagtt
     2881 taagaagtca cgatccggta acgggccttt caggatatga tgccaaaagt gagccaagtt
     2941 ttttgtgtcc gagaattgag aatgaggaaa actgacatat ttaccaggtt ttttcttaga
     3001 aaatcttttc tggtctgtag agtttgcttg agtgcctaag gtttgggtat aatttttgtt
     3061 ttaatgtttg aaattattag gttttgaatt aagttgttga tgatgtatta gtcgagtatg
     3121 gtaaaaagaa tgaatggtta tgcattc
//
LOCUS       XM_071886091            3132 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin carboxyl-terminal
            hydrolase 23-like (LOC139904151), transcript variant X2, mRNA.
ACCESSION   XM_071886091
VERSION     XM_071886091.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3132
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3132
                     /gene="LOC139904151"
                     /note="ubiquitin carboxyl-terminal hydrolase 23-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139904151"
     CDS             149..2905
                     /gene="LOC139904151"
                     /codon_start=1
                     /product="ubiquitin carboxyl-terminal hydrolase 23-like
                     isoform X2"
                     /protein_id="XP_071742192.1"
                     /db_xref="GeneID:139904151"
                     /translation="MQSTIHPQRKNFKLFKPQSIMATKALSLIDNNNNTIIKHENPDA
                     ESTDKSPFRRIEFHLARKPFTGFSNGSCDGSFRLETLNPTTSSSKSTQQSVGSGCVNG
                     DGSSGKKTVALEMENGLDPELSFGITFKRIGAGLENLGNTCFLNSVLQCLTYTEPLAA
                     YLQSGKHQSSCRKAGFCALCAIQKHVSRALQLSGRSLAPKDLVSNLRCISRTFRNSRQ
                     EDAHEYMVNLLESMHKCCLPNGVPSESQSAYDRSLVHKIFGGQLRSQCNYCSDKFDPF
                     LDLSLEILRADNLYKAFANFTAKEQLDGGAKQYQCQQCKHKVKALKQLTIYKAPNVLT
                     IHLKRFGSHMSGQKIDKKIHFSSTLDLKPFVTGPYEGDLRYTLYGVLVHAGWSTHSGH
                     YYCFVRTSSGMWYSLDDNRVIQVSEKKVFEQKAYMLFYFKDRQNFPLKKTTDAAHQKE
                     KVAVNGTVKVSIASKQSQMKIGLSNGFSPVAPKEAKTNTILSNGSLNGHKGSAPAKTM
                     SNGFSADAPKEAQVKTLVTACTERSGLTPVAPKETQMKTSENDRSLNGYQSPVNVDTV
                     RNGFSTGAQEQTQKTEASAPKIAAKSNLENSQKGETGDNSVQAALTVSCSNPITTPVD
                     TVNKTLDEVNDKEIAVGDGQIKEVSTKLPDLSGLQEMETSVEKKSRCKKSHKRAKNLL
                     KCSVISMKFSSNILMGTSLNKRKKKKRKQSKRIKSLEQENSFNEGPSSSDKSEAQVAV
                     KPLFANASKENSINESPSSSDKVNAQKAVDPFESGTKHRDNKDCAVLATSECNGVSNG
                     SQSSTQKDLVHMLTRGMDDRYVPRWDDDDDSTPYQRRETKRELTIGYIGDEWDEEYDR
                     GKRKKVRMSQTEFDGKNPFQNIANERLKSHAEKQTLINRSPLITVKNKQFKKSRSGNG
                     PFRI"
     misc_feature    545..1438
                     /gene="LOC139904151"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; Region:
                     Peptidase_C19E; cd02661"
                     /db_xref="CDD:239126"
     misc_feature    order(560..562,575..577,1322..1324,1373..1375)
                     /gene="LOC139904151"
                     /note="active site"
                     /db_xref="CDD:239126"
     polyA_site      3132
                     /gene="LOC139904151"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accacgtcaa agtagggttt atacactcgg ttccagcttc atactttctt cctcgttctc
       61 cccctacacc tccaaagtac ccatttgaaa tccatcctaa aaactcaaaa ccccaaaatt
      121 cctcaaattc catattaaat cgatctttat gcaatcaacc atacacccac aacgcaaaaa
      181 tttcaaactc tttaaacccc aatcaattat ggctactaaa gctttaagct taattgataa
      241 taacaataat actatcatca aacatgaaaa cccagatgct gaatccaccg ataaatcccc
      301 ctttagaagg attgaatttc atctagcaag aaaacccttc actggattta gcaacggcag
      361 ttgtgacggt agttttcggc tcgaaacact taatccgacg acatctagct ctaaaagtac
      421 ccagcagagt gtcgggtcgg gttgtgtcaa tggtgatggg tcatcgggta agaaaacggt
      481 agcgttggag atggaaaatg ggctggatcc ggaactcagt tttgggatta cttttaaaag
      541 aattggcgct ggtttggaga atcttggtaa tacttgcttt cttaattcag tactgcaatg
      601 tttaacttat acagagcctt tagctgcata tttacagagc ggaaaacatc aaagtagttg
      661 tcggaaagct ggattttgtg ctttatgtgc tatccagaag catgtcagcc gtgcactaca
      721 attatcaggc agatcattgg cacctaagga tcttgtttcc aatttacgct gcatatcaag
      781 gacgtttagg aattcaaggc aggaggatgc acatgaatat atggtcaatt tattggaatc
      841 gatgcacaag tgttgtttgc ctaatggagt gcctagtgaa tcacaaagtg cttatgatag
      901 aagtttggtc cacaagatat tcggtggcca acttcgtagt cagtgtaact attgttctga
      961 caagttcgat cctttcttgg atttaagtct tgaaatcttg agagctgaca atttgtacaa
     1021 ggcttttgct aattttactg ctaaagaaca gttagacggt ggggctaaac aataccaatg
     1081 ccagcaatgc aaacataaag tcaaagctct taaacaactt acaatctaca aagccccaaa
     1141 tgttctaact attcacctca aacgctttgg ttcccatatg tcgggccaaa agattgataa
     1201 gaagatccat ttcagttcca ctctggattt aaaacctttt gtgacgggtc catatgaagg
     1261 ggatttaagg tacactctat atggtgtttt ggttcatgcc ggttggagca cacattctgg
     1321 tcattactac tgctttgttc ggacatctag tggcatgtgg tattcacttg acgacaatag
     1381 ggttattcaa gtgagtgaaa agaaagtttt tgagcaaaaa gcctacatgc tattttattt
     1441 caaagacaga caaaattttc cgttaaagaa gacgacagat gctgcccatc agaaagagaa
     1501 ggttgcggtg aatggtacag tcaaagtctc catcgcatca aaacaatccc aaatgaaaat
     1561 tggtttaagt aatgggttca gtccggttgc accaaaagaa gccaaaacga acaccattct
     1621 tagtaacggg tcattaaatg gccacaaagg ttcagctcct gctaaaacca tgagcaatgg
     1681 gttcagtgct gatgcaccaa aagaggccca agtaaaaact ttggttactg cttgtactga
     1741 gagaagcggg ttaactcctg ttgcaccaaa agagacacaa atgaagacta gtgaaaatga
     1801 tagatcatta aacggttacc agtctccggt taatgttgat acggtgagaa atgggttcag
     1861 tactggcgca caagaacaga cccaaaagac agaagcttca gctccaaaaa ttgccgccaa
     1921 atcaaatttg gagaactccc aaaagggcga aactggagat aatagtgttc aagctgcttt
     1981 aacagtcagt tgcagcaatc cgattactac tcctgtagat actgtgaata aaacactgga
     2041 cgaggtcaat gataaggaaa ttgctgtggg tgatggtcaa atcaaggagg tgtctactaa
     2101 attgcctgac ttatcaggtt tacaagaaat ggaaacatct gtggagaaga aatcccgttg
     2161 caagaaaagc cataaaagag cgaaaaacct tttgaagtgt tcggtaataa gcatgaaatt
     2221 cagctcaaac attcttatgg ggacatcatt aaacaagagg aagaaaaaga agcgtaagca
     2281 aagcaaacgg atcaagagtc ttgaacaaga aaactccttc aatgaaggtc catcttcatc
     2341 cgataaatct gaagcacaag tggcggtaaa accattattt gcaaatgcat ccaaagaaaa
     2401 ctccatcaac gaaagtccat cttcttcgga caaagttaac gcacagaagg ccgtagatcc
     2461 gttcgaaagc ggaactaaac atagggataa taaagattgt gctgtgcttg caacaagtga
     2521 gtgtaatggt gtctcaaacg gaagtcaatc gtccacacaa aaggatttgg ttcatatgct
     2581 tacaagaggc atggatgata gatatgtccc tcgttgggat gatgatgatg attcaacacc
     2641 atatcagaga agagaaacaa aacgtgaact caccattgga tacattggag atgaatggga
     2701 cgaagaatat gacagaggaa agagaaagaa agtacggatg tcacaaactg aatttgatgg
     2761 gaagaatccg ttccaaaata ttgcaaacga gaggttaaaa tcgcatgcag aaaaacaaac
     2821 tttgattaat agatcccctt taataacggt gaaaaacaag cagtttaaga agtcacgatc
     2881 cggtaacggg cctttcagga tatgatgcca aaagtgagcc aagttttttg tgtccgagaa
     2941 ttgagaatga ggaaaactga catatttacc aggttttttc ttagaaaatc ttttctggtc
     3001 tgtagagttt gcttgagtgc ctaaggtttg ggtataattt ttgttttaat gtttgaaatt
     3061 attaggtttt gaattaagtt gttgatgatg tattagtcga gtatggtaaa aagaatgaat
     3121 ggttatgcat tc
//
LOCUS       XM_071886092            1565 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides omega-6 fatty acid
            desaturase, chloroplastic (LOC139904152), mRNA.
ACCESSION   XM_071886092
VERSION     XM_071886092.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1565
                     /gene="LOC139904152"
                     /note="omega-6 fatty acid desaturase, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139904152"
     CDS             49..1380
                     /gene="LOC139904152"
                     /codon_start=1
                     /product="omega-6 fatty acid desaturase, chloroplastic"
                     /protein_id="XP_071742193.1"
                     /db_xref="GeneID:139904152"
                     /translation="MACRLADSCVLFKGPQQQKPIHRHKLVSLYPTGTSYLAWQALSQ
                     CKTKHQRYVIPLKRTKIIKAVASPVISPFPADSAERRQELCESYGFRQIGEPLPDNIT
                     LKNVIDTLPKTVFEIDDVKAWKSVLISATSYALGLFMIAKSPWYLLPLAWAWTGTAVT
                     GFFVIGHDCAHKSFSKNKLLEDIVGTLAFMPLIYPYEPWRFKHDRHHAKTNMLNEDTA
                     WHPVMKKHFEESPIFKKAIVFGYGPIRPIMSISHWLIWHFDLKKFRPSEIGRVKISLA
                     CVFAFMAIGWPLIVYKAGIVGWIKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKSSEKW
                     NAAQAQLSGTVHCDYPRWIEILCHDINVHIPHHVSSKIPSYNLRAAHKSLQENWGKYM
                     NEASWNWRLMKTILTICHVYNEERNYISFEEVAPEISQPIAFVRKVMPDYA"
     misc_feature    49..1377
                     /gene="LOC139904152"
                     /note="omega-6 fatty acid desaturase; Region: PLN02598"
                     /db_xref="CDD:215323"
     misc_feature    order(547..549,559..561,655..657,664..669,1135..1137,
                     1144..1149)
                     /gene="LOC139904152"
                     /note="putative di-iron ligands [ion binding]; other site"
                     /db_xref="CDD:239584"
ORIGIN      
        1 tacatactct aaaaaccccg cattttaatt tttggttttc tgcttccaat ggcttgcaga
       61 ctcgcagatt catgtgttct tttcaagggt cctcaacaac aaaagccaat tcataggcat
      121 aaattagtgt cattgtatcc aacaggcaca tcttatctgg cgtggcaagc tctatcccaa
      181 tgtaaaacca aacaccaaag atatgtaatc ccattgaaaa ggactaaaat cataaaagca
      241 gttgccagcc ctgttatttc accatttcca gcagacagtg cagaaaggag acaagaatta
      301 tgtgaaagtt acggtttcag gcaaattggg gaaccgctcc cagataatat cacgttaaag
      361 aacgttatcg acacccttcc taaaacggtg tttgagattg atgatgttaa agcatggaag
      421 tcagttttga tatctgccac ttcatatgca cttggccttt tcatgatcgc caaatctcct
      481 tggtatcttc ttccactggc ttgggcatgg acaggaactg cagttacagg gttctttgtg
      541 ataggtcatg attgtgcaca caaatctttc tcgaagaaca aactgttgga agatattgtt
      601 ggtactttgg ctttcatgcc attgatatac ccatatgagc cttggcgatt taaacatgac
      661 cgacatcatg ccaaaacaaa catgttgaat gaagatacgg cttggcaccc tgtaatgaaa
      721 aaacatttcg aggagtcacc aattttcaag aaggcaattg tattcggata tggtcctatt
      781 cgtcccatca tgtctatatc acactggtta atatggcatt ttgatttaaa aaaattcaga
      841 ccaagtgaaa ttggaagagt aaagatcagc cttgcttgcg tgtttgcatt tatggcaatc
      901 ggatggccat taattgtgta caaggcgggg atagttggat ggataaagtt ctggctaatg
      961 ccgtggctcg gctatcattt ttggatgagc actttcacaa tggttcacca tactgcaccg
     1021 cacatacctt ttaaatcatc agagaaatgg aatgcggctc aggcccaact gagtggcacc
     1081 gtgcactgtg attatcctcg ctggatagaa atcctttgtc atgatatcaa cgttcatatt
     1141 cctcaccatg tttcctcaaa gattccaagc tacaatctgc gagcagctca taaatctctt
     1201 caagagaatt ggggaaaata tatgaatgag gcgtcatgga actggcgttt aatgaagaca
     1261 atcttgacga tatgtcatgt atacaacgag gagcgtaatt acatctcatt tgaagaggtt
     1321 gctcctgaaa tatcccaacc aattgcattc gttagaaaag taatgcccga ctacgcgtga
     1381 tacaatcatt cagtttgttt tctatacata catctatatt tgatttgtta attggtcatc
     1441 aattataaag ttcactttgt gcaagacaag ctggacactt tttaatatga actaagcttt
     1501 tcgtttgttc atacctgata cttgtggaat actgctactg tattggatta agattcataa
     1561 atatt
//
LOCUS       XR_011778680             174 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904153), ncRNA.
ACCESSION   XR_011778680
VERSION     XR_011778680.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..174
                     /gene="LOC139904153"
                     /note="uncharacterized LOC139904153; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904153"
     ncRNA           1..174
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904153"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904153"
ORIGIN      
        1 tgctacactc tccactaaaa attgtatagc atgggagttt atgcagcatc atacaggatt
       61 ctggattttc tgttgaagag taggagcaaa ttttgcgcag tctgacagct tgtaaatata
      121 cactaaattg aagtttgttg tttgtagtga aggtaaagac ctgatgtatc tcat
//
LOCUS       XR_011778681             702 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904154), ncRNA.
ACCESSION   XR_011778681
VERSION     XR_011778681.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139904154"
                     /note="uncharacterized LOC139904154; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904154"
     ncRNA           1..702
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904154"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904154"
ORIGIN      
        1 tcacttagca atgatacaat tacaatttac acatacagtg ttcttgattt attagagata
       61 tatcggatga gaagactttg gaagaaaacc aaattaaagc tgacagaaga gagtgagcat
      121 atgcaaacat tatgtataga aaaactacac atttgttaaa aaaaatacat atatctatgt
      181 gtatgtgtat atatgcatgt gctcacttct cttctgtctg ctcctatcac cattcgccaa
      241 ctatgtaacc tattttaaag taacctaatt aaaactcttt atatttatgt aatgtttttt
      301 cttattatct tatttttgtg agtatatttt atattttatg tgttggttgg gtgttgagat
      361 gcaggaaaaa aaggagtgac acgtggacag atcctgttga tatttgatac tcacaaacca
      421 tcatatatca tccactctca gtctaccatc atcactgtat atgcagaaaa agctgcaagt
      481 ttattgacta atttacagct tggctctttc ttctactttt atattttcta taaaaaaaaa
      541 agtaattttt tatttatctt tttcactttc ttgaagtgtg tataacaatg gtaacttgat
      601 cagattcaag ttgaagaaga tgatgtggga acaacaggta ctaaaagatt ccaactttgg
      661 agtttgaatc atgtacttgt tcttgatgaa gagcaagaag ag
//
LOCUS       XR_011778682            1901 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904155), transcript variant X1, ncRNA.
ACCESSION   XR_011778682
VERSION     XR_011778682.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1901
                     /gene="LOC139904155"
                     /note="uncharacterized LOC139904155; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904155"
     ncRNA           1..1901
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904155"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904155"
ORIGIN      
        1 agttataatc tgagtgtaat gataatttag gcttcatgag tagattcgag attatgtggc
       61 cgcgtgtagg tttaatccga ttcgtatgta gtattcagat cgttacgcaa tgaaaaatcc
      121 attcactacg atcgggctcc tttaaactca tgattataac ttttatcata ttcaacccaa
      181 ttactttttt aatttaattt cattttgatc tttaatattg gtattgactt ttgatgaaat
      241 tgaagttaac atactgatca ctcacttaca tttcgttttt gctgtcaaac atgacccatt
      301 cagtaagtta ttaccaacca aaaacttaga tttaataaac tttactttaa tttagttctc
      361 tgcacatgga actctacata atatgcataa tcatagtcat atgcttgctt aaagttgtca
      421 tctcctttca attgcaacat gttacttaca tgctaataaa tagtagttct ccatgttatt
      481 tcgtagacaa acttttactg aaattgtcca cgtgttggtg gtttttagcc gttttcatct
      541 ttcccaagca aaaactgcac aaagagtcct cgaagtgagt tttttttctc aattacatcc
      601 tttgccctaa taaatgttaa ctctcccgtt aatttattaa taaaattgtt ggaaatcttc
      661 tcatggtagg ttcctatcca catctcttta ttttttcctt taataagtat gctctttatc
      721 attatcataa tggttaatag ttaatatgta agtatattct atatgcttac tatcacagct
      781 ttggagattt tgtatgactt ttgctgacat tattggtctt tggcccttta cccttgacga
      841 gttcattcaa gctcttcatg attacgatca aaattattgg gagaagttca cattgatcta
      901 ttaaagctga tcgtaagaga tactgaagat gttgcaagga caccgtctgg tgggcccgga
      961 gcaaatcaat atacaattgc taatcctgaa ggtgtgattc ccgaagcaac gttggagacc
     1021 gtttcgcatt gtcatgtggg gaggattctt ggtgaacttc tatgaaggac caccatttat
     1081 gttcaagcat tcacatagag atcactcgaa ctttgtcaac cgtacgtgca agcttttcgc
     1141 tagatggcac caaattcatc acaattagct cggacaaaca ggggctgtta tatgatggta
     1201 aaactctaga gaagggtgag ttgtcttcag aggattgtta caagggtagt atatatatat
     1261 atgctactag ctggagtctg agagtaaaca tgaagttata atctaaagtt ggttatatgt
     1321 ttgattttgt tacgtttcct cttgaaatat cttttttcta gattgcagca cagttgattt
     1381 tttatgcgtg ttttcagctt agtttgagga atttcctttt ttgtgagatt gtgtgttgtt
     1441 tttgttgtgt atatagaagt atgatcctta tatcctgcca gaagtagcag gctagcagca
     1501 ggtcacgagt tcacgtttga aaatcgtaat gtcgggaaaa ttgaagtgca caatgacctg
     1561 gcaaagggat ccatgcttgc acatatgcta gtatttgtta ttttggatga aactgccaac
     1621 tggaatagca atacaggtgg aaactggtct tggcgaacgt ctttcatcta tggatacaca
     1681 gacaccacga atgtgtgatt atgatgccat tattgaggac tcggtcaaat ctacttttta
     1741 gttatgaata cgtacttttc agtttatcaa atgttctttt acggttgtaa cgtaaaaaat
     1801 atctaaaaag gaaatgagtg aaataattcg taaagtagtt tttttttgtg ttaaatatat
     1861 ctattctcta atgttttaat ttattttttg gaaacagatt c
//
LOCUS       XR_011778683            1173 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904155), transcript variant X2, ncRNA.
ACCESSION   XR_011778683
VERSION     XR_011778683.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1173
                     /gene="LOC139904155"
                     /note="uncharacterized LOC139904155; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904155"
     ncRNA           1..1173
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904155"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904155"
ORIGIN      
        1 gtgcttacat attgtttgat gaaatgccca agagaaaaag attactaaag ctttggagat
       61 tttgtatgac ttttgctgac attattggtc tttggccctt tacccttgac gagttcattc
      121 aagctcttca tgattacgat caaaattatt gggagaagtt cacattgatc tattaaagct
      181 gatcgtaaga gatactgaag atgttgcaag gacaccgtct ggtgggcccg gagcaaatca
      241 atatacaatt gctaatcctg aaggtgtgat tcccgaagca acgttggaga ccgtttcgca
      301 ttgtcatgtg gggaggattc ttggtgaact tctatgaagg accaccattt atgttcaagc
      361 attcacatag agatcactcg aactttgtca accgtacgtg caagcttttc gctagatggc
      421 accaaattca tcacaattag ctcggacaaa caggggctgt tatatgatgg taaaactcta
      481 gagaagggtg agttgtcttc agaggattgt tacaagggta gtatatatat atatgctact
      541 agctggagtc tgagagtaaa catgaagtta taatctaaag ttggttatat gtttgatttt
      601 gttacgtttc ctcttgaaat atcttttttc tagattgcag cacagttgat tttttatgcg
      661 tgttttcagc ttagtttgag gaatttcctt ttttgtgaga ttgtgtgttg tttttgttgt
      721 gtatatagaa gtatgatcct tatatcctgc cagaagtagc aggctagcag caggtcacga
      781 gttcacgttt gaaaatcgta atgtcgggaa aattgaagtg cacaatgacc tggcaaaggg
      841 atccatgctt gcacatatgc tagtatttgt tattttggat gaaactgcca actggaatag
      901 caatacaggt ggaaactggt cttggcgaac gtctttcatc tatggataca cagacaccac
      961 gaatgtgtga ttatgatgcc attattgagg actcggtcaa atctactttt tagttatgaa
     1021 tacgtacttt tcagtttatc aaatgttctt ttacggttgt aacgtaaaaa atatctaaaa
     1081 aggaaatgag tgaaataatt cgtaaagtag tttttttttg tgttaaatat atctattctc
     1141 taatgtttta atttattttt tggaaacaga ttc
//
LOCUS       XR_011778684            1660 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904155), transcript variant X3, ncRNA.
ACCESSION   XR_011778684
VERSION     XR_011778684.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1660
                     /gene="LOC139904155"
                     /note="uncharacterized LOC139904155; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904155"
     ncRNA           1..1660
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904155"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904155"
ORIGIN      
        1 agttataatc tgagtgtaat gataatttag gcttcatgag tagattcgag attatgtggc
       61 cgcgtgtagg tttaatccga ttcgtatgta gtattcagat cgttacgcaa tgaaaaatcc
      121 attcactacg atcgggctcc tttaaactca tgattataac ttttatcata ttcaacccaa
      181 ttactttttt aatttaattt cattttgatc tttaatattg gtattgactt ttgatgaaat
      241 tgaagttaac atactgatca ctcacttaca tttcgttttt gctgtcaaac atgacccatt
      301 cagtaagtta ttaccaacca aaaacttaga tttaataaac tttactttaa tttagttctc
      361 tgcacatgga actctacata atatgcataa tcatagtcat atgcttgctt aaagttgtca
      421 tctcctttca attgcaacat gttacttaca tgctaataaa tagtagttct ccatgttatt
      481 tcgtagacaa acttttactg aaattgtcca cgtgttggtg gtttttagcc gttttcatct
      541 ttcccaagca aaaactgcac aaagagtcct cgaagtgagt tttttttctc aattacatcc
      601 tttgccctaa taaatgttaa ctctcccgtt aatttattaa taaaattgtt ggaaatcttc
      661 tcatggtagg ttcctatcca catctcttta ttttttcctt taataagtat gctctttatc
      721 attatcataa tggttaatag ttaatatgta agtatattct atatgcttac tatcacagct
      781 ttggagattt tgtatgactt ttgctgacat tattggtctt tggcccttta cccttgacga
      841 gttcattcaa gctcttcatg attacgatca aaattattgg gagaagttca cattgatcta
      901 ttaaagctga tcgtaagaga tactgaagat gttgcaagga caccgtctgg tgggcccgga
      961 gcaaatcaat atacaattgc taatcctgaa ggtgtgattc ccgaagcaac gttggagacc
     1021 gtttcgcatt gtcatgtggg gaggattctt ggtgaacttc tatgaaggac caccatttat
     1081 gttcaagcat tcacatagag atcactcgaa ctttgtcaac cgtacgtgca agcttttcgc
     1141 tagatggcac caaattcatc acaattagct cggacaaaca ggggctgtta tatgatggta
     1201 aaactctaga gaaggaagta tgatccttat atcctgccag aagtagcagg ctagcagcag
     1261 gtcacgagtt cacgtttgaa aatcgtaatg tcgggaaaat tgaagtgcac aatgacctgg
     1321 caaagggatc catgcttgca catatgctag tatttgttat tttggatgaa actgccaact
     1381 ggaatagcaa tacaggtgga aactggtctt ggcgaacgtc tttcatctat ggatacacag
     1441 acaccacgaa tgtgtgatta tgatgccatt attgaggact cggtcaaatc tactttttag
     1501 ttatgaatac gtacttttca gtttatcaaa tgttctttta cggttgtaac gtaaaaaata
     1561 tctaaaaagg aaatgagtga aataattcgt aaagtagttt ttttttgtgt taaatatatc
     1621 tattctctaa tgttttaatt tattttttgg aaacagattc
//
LOCUS       XR_011778685            1609 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904156), ncRNA.
ACCESSION   XR_011778685
VERSION     XR_011778685.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1609
                     /gene="LOC139904156"
                     /note="uncharacterized LOC139904156; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904156"
     ncRNA           1..1609
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904156"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904156"
ORIGIN      
        1 attaaattat gctctagttt tactcattca agctgcaaga atgatggata ataatttcct
       61 tcagcaggtt tggtgcagca atacgtcttt aaaggaatgg ttaaaggggc gtgatgagtt
      121 atcgtttgat aaattaaaat ggagttacta ttcaattaac aaatctcctt ggtaagaccc
      181 tccactgcaa ttggcatcac attttttata ccaattttat attatcgttt ttgttataat
      241 tcaatatgct gaattgatcg atggtataca atacatgcgg cagtgtatat atacacaggt
      301 ttgccctact ctattctaaa caaatatctc acaaattatg gagaggattt actttccatt
      361 ctgactaact gccagcatat gtcgagtatt atgtgactat ataaaatata ttgtacaatc
      421 ttatctaata cagcccctca gtttgagcgg gagggaagac ggacatttaa actgtaccga
      481 aaatcttcaa acaacacacg aggtaacccc ttggtaaata tatccgcaat ctgaaatctc
      541 gtgggaatat ggaggactcg aacttgccca cgtgcaacct tttccctaac aaaatgaatg
      601 tccatttcta tatgcttcgt taagtgatgt tgaactggat taccggacaa gaagatggca
      661 ctaacattat cacaaaaaac aatggttgct gtgtaaatgg ggcatcgtaa ctcaagtaat
      721 agattgcgaa gccaccatga ttctgaaaag gcatttgcta ccccgcgata ctcagcctcc
      781 gcactagagc gtgaaaccgt cggttggcgt ttagcagacc aggagactag attggtaccc
      841 aagaatacac aataaccaga agtagtacga cgggtgtctg gacatccacc ccagtcagca
      901 tcagtatagg aaactaaaga agtcagtgat gagcgtgtga gttgcagacc atgagtgatt
      961 agaaggatat ccaagaaaga cacaagggac ggagcgaggt aacacttaac ctaactggca
     1021 ctcgaaggaa atagttacag ggatcagatc gtatttctca taacactcga aggaaatagt
     1081 tacaggggca acacttcacc taactggcac tacaacaacc ctaattgggc tcacaacacc
     1141 aattctaatt gggcctctca accagcccaa caccaggtcc cttggaatgt gcctccctgt
     1201 ccatatccaa caagcaactg ggctcggcca actcactcgc ccacgaatgc aggaattctt
     1261 gggcctcggc ctagtcaggc taatatggca tctgcttctt ctaatgctag ttattttacc
     1321 actgatattg agagtgcgat gcacacaatg acccttcatc ctccagaaga tacatggtac
     1381 atggatacag gagccacatc acacatgact actaatgcag gattttccgc agggcatacc
     1441 ggttctgaga tgcaatagta ctggtgatct ttacccgctc acttccagct tactacgcag
     1501 cttgtcctca ccttctactt ttacagcttc ttcctcaagt ttatggcatc atcgccttgg
     1561 tcaccccggt attgatgttc ttcgttcgct tattgtaata aaccttcat
//
LOCUS       XR_011778686             758 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904157), transcript variant X1, ncRNA.
ACCESSION   XR_011778686
VERSION     XR_011778686.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..758
                     /gene="LOC139904157"
                     /note="uncharacterized LOC139904157; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904157"
     ncRNA           1..758
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904157"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904157"
ORIGIN      
        1 tttccgatct atatagattc caggatgaca gcattcacaa tcgatcaata acatatttat
       61 atgtctggtt cttaaaggtc gattttgagt tattataatt cgagattctg tatcgctcca
      121 gtcaggtgta ggtacatatt tgttagcccg aattgtaatt cgagtttctg tatcgctcca
      181 gtcaggtgta gaaaaaatgg gacgagaggt tcatgttgat gtatttaaca ttcttattca
      241 tgaaggtaga ataatgtgtt ggttgcagat atggatctgt aatataaaac atatgttaaa
      301 aagaatggga gacagatacg aggtgaaaag tgttttggtt gaaggccagc tcttcaaatg
      361 cgttttcagc aggtactaag aatcaaaatt tagatgccac aactatgtgt atcgtatttg
      421 gttattaaca ttttacacag tgtcaacttt cttagaaatg cccatttgtt catcatagtt
      481 taggttccac gattatgtgt tggttgggtt ttattaggtt gtagtcaaat gggttggtca
      541 ggttttattg acacaacaaa aattttctac aaaagaatca atgtgttatt tatgattgca
      601 aaaaataaac gagcatcgat gagacaggtt ttttagagaa gttaatcaat ccactaacgt
      661 tttcaattgt ttattacagt atctaatttc ttatcagtat ggtgtttgtt gggatatcga
      721 ttagactgtg gcaatagcca caagaaataa gaattaaa
//
LOCUS       XR_011778687             746 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904157), transcript variant X2, ncRNA.
ACCESSION   XR_011778687
VERSION     XR_011778687.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..746
                     /gene="LOC139904157"
                     /note="uncharacterized LOC139904157; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904157"
     ncRNA           1..746
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904157"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904157"
ORIGIN      
        1 tttccgatct atatagattc caggatgaca gcattcacaa tcgatcaata acatatttat
       61 atgtctggtt cttaaaggtc gattttgagt tattataatt cgagattctg tatcgctcca
      121 gtcaggtgta ggtacatatt tgttagcccg aattgtaatt cgagtttctg tatcgctcca
      181 gtcaggtgta gaaaaaatgg gacgagaggt tcatgttgat gtatttaaca ttcttattca
      241 tgaaggtaga ataatgatat ggatctgtaa tataaaacat atgttaaaaa gaatgggaga
      301 cagatacgag gtgaaaagtg ttttggttga aggccagctc ttcaaatgcg ttttcagcag
      361 gtactaagaa tcaaaattta gatgccacaa ctatgtgtat cgtatttggt tattaacatt
      421 ttacacagtg tcaactttct tagaaatgcc catttgttca tcatagttta ggttccacga
      481 ttatgtgttg gttgggtttt attaggttgt agtcaaatgg gttggtcagg ttttattgac
      541 acaacaaaaa ttttctacaa aagaatcaat gtgttattta tgattgcaaa aaataaacga
      601 gcatcgatga gacaggtttt ttagagaagt taatcaatcc actaacgttt tcaattgttt
      661 attacagtat ctaatttctt atcagtatgg tgtttgttgg gatatcgatt agactgtggc
      721 aatagccaca agaaataaga attaaa
//
LOCUS       XR_011778688             704 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904157), transcript variant X3, ncRNA.
ACCESSION   XR_011778688
VERSION     XR_011778688.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..704
                     /gene="LOC139904157"
                     /note="uncharacterized LOC139904157; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904157"
     ncRNA           1..704
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904157"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904157"
ORIGIN      
        1 aattaatttc cgatctatat agattccagg atgacagcat tcacaatcga tcaataacat
       61 atttatatgt ctggttctta aaggtcgatt ttgagttatt ataattcgag attctgtatc
      121 gctccagtca ggtgtagaaa aaatgggacg agaggttcat gttgatgtat ttaacattct
      181 tattcatgaa ggtagaataa tgtgttggtt gcagatatgg atctgtaata taaaacatat
      241 gttaaaaaga atgggagaca gatacgaggt gaaaagtgtt ttggttgaag gccagctctt
      301 caaatgcgtt ttcagcaggt actaagaatc aaaatttaga tgccacaact atgtgtatcg
      361 tatttggtta ttaacatttt acacagtgtc aactttctta gaaatgccca tttgttcatc
      421 atagtttagg ttccacgatt atgtgttggt tgggttttat taggttgtag tcaaatgggt
      481 tggtcaggtt ttattgacac aacaaaaatt ttctacaaaa gaatcaatgt gttatttatg
      541 attgcaaaaa ataaacgagc atcgatgaga caggtttttt agagaagtta atcaatccac
      601 taacgttttc aattgtttat tacagtatct aatttcttat cagtatggtg tttgttggga
      661 tatcgattag actgtggcaa tagccacaag aaataagaat taaa
//
LOCUS       XM_071886093            2355 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides actin-interacting protein
            1-2-like (LOC139904158), mRNA.
ACCESSION   XM_071886093
VERSION     XM_071886093.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2355
                     /gene="LOC139904158"
                     /note="actin-interacting protein 1-2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139904158"
     CDS             108..1934
                     /gene="LOC139904158"
                     /codon_start=1
                     /product="actin-interacting protein 1-2-like"
                     /protein_id="XP_071742194.1"
                     /db_xref="GeneID:139904158"
                     /translation="MAKLIETYACIPSTERGRGILISGNPKTNSFLYCNGRSVIIRYL
                     DRPLDVEVYAEHAYQTTVARFSPNGEWIASADVSGTVRIWGTHNGFVLKNEFRVLSGR
                     IDDLQWSDDGMRIVASGDGKGKSFIRAFMWDSGSNVGEFDGHSRRVLSCAFKPTRPFR
                     IVSCGEDFLVNFYEGPPFKFKQSHRDHSNFVNCVRFSPDGTKFITVSSDKRGLLYDGK
                     TAEKKGELSSEDCHKGSIYAVSWSPDSKQVLTVSADKTAKIWTISENFNGTVAKTLCP
                     GSDGVEDMLVGCLWQNDYVVTVSLGGTIYVYSASDLDKEPMIMCGHMKNVNSLAVLKS
                     SPEIILSSSYDGLIFRWTRGFGYSGKLERKDKNQIKCLAVVDEEIMSSGFDNKIWRIP
                     LSGDQCAEANIVDIGNQPKDLSFALNDRDLALIAIETGVVLLRGTQVLSTVDLGFTVS
                     ACVIAPDGTEAIVGGQDGKLHIYSVNGDSLKNEAVLEKHRGEITVIRYSPDVSMFASA
                     DANREAVVWDRVTREVKLKNMLYHTARINSLAWSPDNTMVATGSLDTCVIVYEVSKPA
                     SSRTTIKGANLGGVYAVAFVDDNTVVSSGEDACIRFWQITPR"
     misc_feature    288..401
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    297..1925
                     /gene="LOC139904158"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    414..533
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    552..662
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    678..797
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    813..929
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    948..1028
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1083..1328
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1455..1565
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1584..1697
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1713..1826
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1845..1916
                     /gene="LOC139904158"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     polyA_site      2355
                     /gene="LOC139904158"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttcgcacca ttaacacaaa attcccccat cttccctgta aaaagctccc atctttttgc
       61 atttttcaac cccccatttt acaattttta tcaaccaaat caagaaaatg gcgaaactta
      121 tagaaacata cgcttgtatc ccatcaacag aacgtggccg cggaattcta atctccggca
      181 acccaaaaac caactccttt ctatactgca acggtcggtc ggttataatc cgttatctcg
      241 atcgaccgtt ggatgtggag gtgtatgcag aacacgctta tcaaacaacc gttgctagat
      301 tttcacccaa tggtgaatgg atcgcgtctg ctgatgtgtc tggtacggtt aggatctggg
      361 ggacacataa tgggtttgtt ttgaagaatg agtttcgggt tttatcgggt cggattgatg
      421 atttacaatg gtctgatgat gggatgagga ttgtggcttc tggtgatggc aaagggaaat
      481 cttttattag agctttcatg tgggattctg gaagcaatgt tggagaattt gacgggcatt
      541 caagaagagt tctaagctgc gcattcaaac cgactagacc atttcgcatc gtctcatgcg
      601 gagaggactt cttggtgaac ttctatgaag gtccaccatt taagttcaag cagtcacata
      661 gggatcactc aaattttgtc aactgtgtaa gattttcgcc tgatggcacc aaattcatca
      721 ctgtgagctc tgacaaacga gggctgttat atgatggaaa aactgcagag aagaagggtg
      781 agttgtcatc agaggattgt cacaaaggaa gtatatatgc tgttagctgg agtcctgaca
      841 gtaaacaggt gctaaccgta tcagctgata agactgctaa aatatggaca atatcagaga
      901 atttcaatgg gactgttgca aagacattat gtccaggctc tgacggtgtc gaagacatgc
      961 tagttgggtg tctatggcaa aatgattatg tagttaccgt gtctctcggt gggaccatat
     1021 atgtatactc tgcaagtgat cttgataagg aaccaatgat tatgtgtgga cacatgaaga
     1081 atgttaattc actagcagta cttaaaagca gcccggagat tattttatcc agtagctatg
     1141 atggattaat atttaggtgg actcgagggt tcggttacag tggtaagtta gagagaaaag
     1201 ataaaaacca aattaaatgt cttgctgttg ttgacgagga gatcatgtct tctggatttg
     1261 acaataagat ttggaggatt cctctaagtg gagaccaatg tgcagaagca aatattgttg
     1321 acattgggaa tcaaccaaag gacttgagtt tcgctctgaa tgatcgtgat cttgcattga
     1381 ttgctatcga gacaggtgtc gttctcctgc gtggtacaca agtattgtca actgttgacc
     1441 tagggtttac agtgagtgcc tgtgtaattg cccctgatgg aacagaagcc attgtgggtg
     1501 ggcaagatgg taaattacac atttattctg tcaatggtga ttctcttaag aacgaagctg
     1561 ttcttgaaaa acatcgaggt gaaatcaccg tgatacgtta ttctcctgac gtttctatgt
     1621 ttgcctctgc tgatgccaat agagaagctg ttgtctggga tcgtgtcacc agggaggtga
     1681 agcttaagaa catgttatat cacacagctc gtataaatag tttagcttgg tctcctgata
     1741 ataccatggt tgcaaccgga tctttggata catgtgtcat tgtatatgaa gtaagcaagc
     1801 cagcctcaag ccgcacgaca ataaagggag ccaacctcgg tggggtctac gcagtcgcat
     1861 ttgttgatga caacactgtc gtgagttccg gtgaagacgc ctgcattcgt ttttggcaga
     1921 taactccacg ataaacatat ttcaagaagt atttaatttt tcttggatgt gcaatttgtt
     1981 gctggtatat cattttcttt ttgtaaagtt ggtttgcaat cgtgagtcag gcgtggatta
     2041 tgcagtagta gtagtagtag tagtagttga tagtgatgtg ctcttgggct gagttgacca
     2101 atggtcacta aaccatattt tggtaagaaa tttcagccag ctttaattca aaggttaagt
     2161 ggatatcaaa tacatgcttg ttgaaatacg gtgtcacttg acaacatcat tggacaacaa
     2221 attacacagc gcgttcagga gacggtgatg ttcctgtttt tgattttgtt tcttaatgca
     2281 ataaagttgt atttgattta ataacttttt gatggtacag tttttttttt tagcccttca
     2341 atttattttg gtgtg
//
LOCUS       XM_071886094            3274 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904159), mRNA.
ACCESSION   XM_071886094
VERSION     XM_071886094.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3274
                     /gene="LOC139904159"
                     /note="uncharacterized LOC139904159; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904159"
     CDS             332..3007
                     /gene="LOC139904159"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742195.1"
                     /db_xref="GeneID:139904159"
                     /translation="MIGFCDENGEKIIINQHYPKGSLSMHLSDPKFVWEKRKDLVWGV
                     VNAIIYLHDMETRSYYVIHRNINSSTILLDKNWKPMLSGFEFSIKRLVDRKNQVFLCG
                     PLGTRGYIDPTTETNGGVTHKSDMYSLGVVLFEILCGRKANEDGRLLVPLVFKEEFKK
                     LVHPNRLSEKQDEASYWWFSMIKGVAYSCLHEDHGQRPSASEIPNKLMGLSFDSDNGY
                     EYDRWSLKQRGAYRKYPVIKRVPPEPWKIDNLEHLRIELTDIKTANYSHENNIIKFAD
                     YEYIHYKVEVRCYDREYISLDKRNNEDELPKRDYNAKMICVYYDKNYNTKPLQILSRC
                     HHRNIESFLGYSDSIKSYRRKPDDEFFMFLFFELLDSAKYLSDHLDSYMLTWEKRLKI
                     CIDVAHGLRYLHDEIDDQTMVIHNDIKCSNIMFDDDSSRAQISGLERLESVPMDVVQR
                     MRKQNCQVDIDLQMGAEYARLVKMDVIGFGLFMYEIMCSDSLTLSLGETDGERDQRLA
                     HTIEKAFKGGSKKRQIRPALMNANSQNNFFLHVGPNEDSLDTFIETIRWCLVGKQNLN
                     KRPTMNDVIKELKKALAFHENSRDNFKMSFQDIKMATQNFSNEIGGGGFGSVYKGEVS
                     NGHKTIVAKKLDTSYGQGEKQYYTELEILYVYKHENIIGLEGYSRETDEKIIVYEYAA
                     RGSLDRHLKSASLTWRNRLKICIDAANGLEFLHGGVEGQVVIHRDIKAANILLFSDWK
                     AKLGDFGLSIISAIDKETDYVIDHPCGTESYVDPLYRKLGLLTLESDIYSFGVVLFEI
                     LCGRTTYAIIPRDWSLSVLDFVKLKFEGKKDEMVFKAIKDEIVPESLTTFLNLIYKCL
                     DGDRKSRPTSKEVLTELNKALKFQNEHRILEPITA"
     misc_feature    332..961
                     /gene="LOC139904159"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1313..2071
                     /gene="LOC139904159"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2159..2956
                     /gene="LOC139904159"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2159..2170,2177..2179,2183..2185,2222..2224,
                     2228..2230,2315..2317,2363..2374,2510..2512,2522..2527,
                     2531..2533,2561..2566)
                     /gene="LOC139904159"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 gtttatcata ccatctcctc ctactgcaat catttgtttt ttactacagt atctcttact
       61 gtaacaaaac tatggcatcc tcaatctcga aaaagttagc tcatctacaa atcccacttg
      121 aaaatatact aaaggccaca gacaattttg ctgctaaaaa tataatcggg aagggggatt
      181 tggtaacgtc tataaaggga tacttgatca taaaggggag ttgataaaaa ttgctgctcg
      241 gaggttagat cgtaagggac ggcaaggaga agttgagttc tggacggaga tttccttgct
      301 ttccgatctc aatcataaaa atataatctc tatgattgga ttttgcgacg aaaatggtga
      361 gaagatcatt ataaatcaac attatcccaa aggaagtttg tcgatgcatc ttagtgatcc
      421 aaagttcgtg tgggagaaaa gaaaagattt agtttggggt gttgttaatg caataatata
      481 cctccatgat atggagactc ggagttatta tgttatacat cgtaatatta atagttctac
      541 aattttatta gataaaaatt ggaagcccat gttatctgga tttgaatttt caatcaaacg
      601 tttagtagat cgtaagaacc aggttttcct atgtggtcca ctcgggacac gagggtatat
      661 agaccccacg accgaaacga atggaggtgt gacacacaag tcagatatgt actcattggg
      721 cgttgttcta tttgaaatct tgtgcgggag gaaagcaaac gaggatggta ggttgttagt
      781 tccattggta tttaaagaag agttcaagaa actagtccat cctaatcgat tgtccgaaaa
      841 acaagatgag gcgtcatatt ggtggttctc gatgataaaa ggagttgcat actcttgctt
      901 acatgaggac catgggcaac gtcctagtgc atcagagatt cctaacaaac taatgggctt
      961 gagctttgat agtgataatg gatatgagta tgatcgttgg tcactgaagc aaagaggcgc
     1021 ctaccgaaaa tatccagtga ttaaaagagt accacccgag ccttggaaga tagacaactt
     1081 ggaacacttg agaattgaac taacagacat aaagacggcc aattattcgc acgaaaataa
     1141 cataatcaag tttgccgatt atgagtatat tcattacaaa gtagaagtaa gatgttacga
     1201 tagggaatat atttccctag acaaaagaaa taatgaagat gaactaccaa agagagacta
     1261 caatgcaaag atgatatgtg tctactatga taaaaattac aacactaaac cattacaaat
     1321 tcttagtcgt tgtcatcatc gcaacatcga atcgtttctt ggatattcag acagcataaa
     1381 atcatatcgt agaaagccag acgatgaatt ttttatgttt cttttctttg agttattaga
     1441 ttctgctaaa tacctttctg atcatttgga tagttatatg cttacatggg aaaaacgttt
     1501 gaaaatctgc attgatgttg cacatggctt gagatacctt catgatgaga ttgatgacca
     1561 aacgatggta atacacaatg atataaaatg ctctaatatc atgttcgatg atgactcttc
     1621 gagggcacaa atatctggac ttgaacgctt ggaatcagtg cctatggatg tcgttcaacg
     1681 tatgcgaaaa cagaattgtc aagttgatat agatcttcaa atgggagcag aatatgctag
     1741 acttgttaag atggatgtaa ttggattcgg attgtttatg tatgagatca tgtgtagcga
     1801 ttctttaacc ctttctttag gggagacgga tggtgagcga gaccaacggt tagcccacac
     1861 gatagaaaaa gccttcaaag gtggaagtaa aaagaggcag atacgtcctg cattaatgaa
     1921 tgcaaacagt caaaacaatt tctttctcca tgtaggaccc aacgaagact cattggacac
     1981 attcatagaa actatacgtt ggtgtttggt aggaaagcag aacctgaaca agcgtccaac
     2041 gatgaatgac gtcatcaagg aacttaaaaa agcattagcc tttcatgaaa acagcagaga
     2101 caacttcaaa atgtcatttc aagatattaa aatggcgaca caaaatttca gtaatgaaat
     2161 tggaggggga ggtttcggaa gcgtatacaa gggagaagtt tcaaatgggc ataagaccat
     2221 tgtcgcaaag aagttagaca cgagttatgg tcaaggggag aaacagtatt acaccgagct
     2281 cgaaattctt tatgtgtaca agcatgagaa tattatcggt cttgaaggct atagtagaga
     2341 aacagatgaa aaaatcattg tttatgaata cgcagctagg ggaagtctcg ataggcattt
     2401 aaagtctgct agtctaacgt ggaggaaccg acttaagata tgcatcgatg ctgcaaacgg
     2461 gctggagttc cttcatggag gcgttgaagg gcaggttgtg atacataggg acatcaaagc
     2521 tgctaacata ctactattta gtgattggaa ggcaaaacta ggtgattttg ggctttccat
     2581 aataagtgcg atagataaag aaacggacta tgtcatcgat catccttgtg gtacagagag
     2641 ctacgtggac ccgttgtata gaaaattggg tcttttaacc ttagaatcag atatttattc
     2701 atttggagtg gttttatttg agattttgtg tgggagaaca acgtatgcaa tcattcccag
     2761 agattggagt ttgtctgtac tagatttcgt taagcttaaa tttgaaggaa aaaaagatga
     2821 gatggtgttt aaagctataa aggatgaaat tgtgccagaa tcgttgacta catttctgaa
     2881 ccttatctac aagtgtttgg atggtgatag aaaaagtcga ccaacttcaa aagaagtttt
     2941 gacagaactc aataaggcat tgaaattcca aaatgagcat agaatattgg agcccataac
     3001 cgcctaagat cattatagct agttgtttgg agtggagcaa aatgaagcgc caaggctgtg
     3061 cttattttta caagatggtt caagtggtgg tttgaatgtt tattagtggt aaaaattgga
     3121 tttggtttat ttagtaatgt taatgttatg ttatgcttga gtgatttcca gttactccgg
     3181 actttgtatg taattgttat tcatgtgtaa cccaaaacat gatttgagaa gcagaattat
     3241 gttacacatg gaaaatcgaa tggaaaatat aaga
//
LOCUS       XM_071886095            4381 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycerophosphodiester
            phosphodiesterase GDPDL7-like (LOC139904160), mRNA.
ACCESSION   XM_071886095
VERSION     XM_071886095.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4381
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4381
                     /gene="LOC139904160"
                     /note="glycerophosphodiester phosphodiesterase
                     GDPDL7-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139904160"
     CDS             1872..4181
                     /gene="LOC139904160"
                     /codon_start=1
                     /product="glycerophosphodiester phosphodiesterase
                     GDPDL7-like"
                     /protein_id="XP_071742196.1"
                     /db_xref="GeneID:139904160"
                     /translation="MIRRLLFCFLLIHSCLAKHIHPGYNKSSRRSRLQQKPEPGPGPG
                     KKWLTLKGAEPLVIAQGGFPGLFPDSSMVGYTAAMAMGVPGTLKYCNLQLTKDNLGVC
                     LADIKLNNCTDAATKFPKQQRRYNINGRDIDGWFPNDFTIDEIMKEIRLLQNIFSRAS
                     VFDSVYPPLAPDSVFGMDPKGVLWLNVQNDVFWSSNKLNAVRYIEDSWEYFVADYISS
                     SEIGFLKAVGVSRTFDRTKTKLVFRFLTPVEVEPTSKETYGALINKLAMIKTFASGIL
                     VPKDYIWPVGKDGYLKPATTLVADAHKEGLAVYASGFASDVFSSYNYSYDPAAEYLQF
                     VDNSQFAVDGVVTEYPGSASNAIACLAQVPNMGPKVANTLVISHNGASIDYPGCTDLA
                     YKKAINDGADIIDCNVQMTKDGVAFCLDSADLLGKTNAAMAFMDRSTSIPEVQPKSGV
                     FTFDVTWDEIKSVKPLIQNPFQSGGLLRNPKSKHAGKFLTLPEFLELAKKNSSSILIG
                     IQHAAYLASKKGLDIISTVNGALKKTNLNPKQQVLIQSDDTSLLAKFKASSPSYKRVL
                     LFSKVISDAPKPVIDDIKKYADAVNVGKKSIVQTSKIFFSTGSTKIIEKMHAANISVY
                     VSGFSTESLSMMLDFYSDPYTELVSFLEEGVDGVITDNPKTASAFMRSPCVDPKSTAP
                     FVFQPIKPGDYLAQVEPAVLPPAAAPIPPLQVRDVVDPPLPPVNAAARKDESDKNDEK
                     SKSGLRKNDVDVVSMMLLLLIGWVLVIGC"
     misc_feature    2034..2939
                     /gene="LOC139904160"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     Region: PI-PLCc_GDPD_SF; cl14615"
                     /db_xref="CDD:472694"
     misc_feature    order(2049..2051,2136..2138,2142..2144,2433..2435,
                     2526..2528,2802..2804)
                     /gene="LOC139904160"
                     /note="active site"
                     /db_xref="CDD:176545"
     misc_feature    order(2049..2051,2181..2183)
                     /gene="LOC139904160"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176545"
     misc_feature    2991..3878
                     /gene="LOC139904160"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     Region: PI-PLCc_GDPD_SF; cl14615"
                     /db_xref="CDD:472694"
     misc_feature    order(3003..3005,3084..3086,3090..3092,3399..3401,
                     3510..3512,3747..3749)
                     /gene="LOC139904160"
                     /note="active site"
                     /db_xref="CDD:176498"
     misc_feature    order(3003..3005,3129..3131)
                     /gene="LOC139904160"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
     polyA_site      4381
                     /gene="LOC139904160"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actagagtta gggtttgcta ttaaaaaaaa aataagaaaa aactcagaca acaacaacaa
       61 taaggaaaat gaagcagcaa ttgggaaggg aatattttaa agggttgtta gccccctttt
      121 gctgctcatg attttttcgt tgttaaccct aatcaacaac aacaacaaca acaacaaccc
      181 tttcagctgt taattgatcc tgtctccagc ttctgcttgt tctgtttaaa gaaagatgtt
      241 acacttaagc atcaccagca gctaagcagt taaaataagc aataccaaac ttaaccttct
      301 caaacacatc tatagcaatc gacacattca tttgtgttgt agctattgtt gtaatgatga
      361 atatgaagat gaaaatgaag aacatgttga tattgatatt gatattgata ttattaatga
      421 taaaaaatat gttgcaatta taaaccctaa ttttgatcat aactattgag gctgtgatga
      481 tgaataataa ttgtgttatt gttgttgttg tctgagtgaa ttgagcaaga ttgagatgat
      541 ccgtatcttg gcggggcaaa ttacggaggt ttcgaggtat ttgcagccat ggcggtttta
      601 tcctatttcg cttgatattt cttatagatc tgagcctcat ttattttaat ttcttttcaa
      661 aattgcatcc tttttgttta attttgagat tttttcatct tcattgttca tcaattttta
      721 cttggtttag ggtcaaatgt agacacaatt tttacttgcc tgtttggcaa acgggtcagg
      781 ttgggtcggt ttgggtaacg ggtaaaaatg gttttgggtt aaattgggtc ataggtcaaa
      841 cgggtcaatt ttttaaatgc gtcaaaatgg gtcaggttgg atcggtttgg gtaacgggtc
      901 gaaacgggtc accagtcaat tgggtcaaat gggtcaaaag ggttacatca ctttttttta
      961 catttattac attattttag ttattattat ttattaaata tacataagaa acattaatat
     1021 acataataaa tgatataaac atgaatgctt tataaatttt gtacggatga aactttttat
     1081 gtttgaccca tttgacgcat tcacaaaaca cattagacct attgatcttt gagtattgat
     1141 acccgtacat tcattttttt gtataggact caataggttg gagagaaacc catttgaatc
     1201 tttttttaag ttttgattta cattgttagg cctaattttt ctcaagactc aattgacccg
     1261 aaaggcttga cccaaaaggc ttgacccatt tgacccaaat ttgagtgtgt gggtctcaat
     1321 tgccaggtat actagaaagt gactgataaa atgtagcttc ctgcatcatt agtgaaacta
     1381 attactattt taagatgtaa acacaattat ttactactcc gtataattca gtccatttat
     1441 atccatctcc tatatataag atttatttgt gggtatgatt aactagctct tcattttctt
     1501 tcatgatttt ctttaccttt ttccttttac aaaattttct aattttttga aactcaacag
     1561 ggaaaatgtt ttaaatcaaa agtttctacc atcaggtaac ctttttcaaa ttgatttttt
     1621 tctctatctg taagaattgt ttactctttt tcaacgtgtt gaaaacattc tatccgaacg
     1681 cgaagattca aatatattat ttcgtttgat tgtaaataag tttgatattg tatgttatca
     1741 gccgatcaac attcatatca aattccatct cttttctgtt tttcaatgaa tgggaagaga
     1801 cgaggtttgt aacataacat ctttttgtat atccgtgttg tgacattttg caacgcgaaa
     1861 tcaaacaagt tatgataaga aggttactct tttgtttctt gttaatacat tcatgtctcg
     1921 ccaaacacat tcatcccggt tataacaaat cttcaagacg gtcacgcttg caacagaagc
     1981 ctgaacctgg ccctggtcca ggcaagaaat ggctaacttt aaaaggtgcc gaaccgttag
     2041 tgatagcgca aggcgggttt ccgggccttt ttccggactc atccatggtg gggtatacag
     2101 ccgcaatggc aatgggtgtc cccgggaccc tcaagtactg taatttgcaa ttaacgaaag
     2161 ataatctagg agtttgtctc gcggacataa agcttaataa ttgcaccgat gcagcaacta
     2221 agttcccaaa gcagcaacga cggtacaaca ttaatggtcg tgacattgat gggtggttcc
     2281 ctaacgattt cactatcgac gagataatga aggagatacg tctgttgcag aatattttct
     2341 caagagcaag tgtttttgat tctgtatacc ctcccctggc acccgatagt gttttcggca
     2401 tggacccgaa aggcgtactg tggttgaatg ttcagaatga tgtgttctgg agctcaaaca
     2461 agttaaatgc cgtacggtac atagaagatt cctgggaata ttttgtagct gattacatct
     2521 cgtcatccga gattggtttc ttgaaagctg taggagtgag tagaacattc gatagaacaa
     2581 agactaaact cgtctttaga ttcttgactc ctgttgaggt ggagcccact tccaaagaaa
     2641 cgtacggtgc cctcataaat aagcttgcga tgatcaaaac atttgcctcg ggtattcttg
     2701 taccaaaaga ctatatatgg cccgttggta aagatggata cttgaagcct gcaaccacac
     2761 tcgttgcgga tgctcataaa gaaggtctcg cagtttatgc ttcgggtttt gcatctgatg
     2821 tattttcaag ctacaattat agttatgatc cggcagctga gtacttgcag tttgttgata
     2881 attcacaatt tgctgtcgat ggagtcgtta ctgaatatcc aggatctgct tcaaatgcca
     2941 tcgcatgctt agctcaagtt ccaaatatgg gcccgaaggt tgcaaacaca ttggtgatat
     3001 ctcacaatgg tgcgagtatc gactaccctg gttgcacaga tcttgcatat aaaaaggcta
     3061 ttaacgatgg ggcagacata attgattgca atgtccaaat gaccaaagat ggtgtcgcat
     3121 tttgtctaga ttcagctgat ttattaggaa aaactaatgc agcgatggct tttatggatc
     3181 ggtctacatc cataccagaa gttcaaccta aaagtggcgt tttcacattc gatgtcacgt
     3241 gggacgagat caagtccgtt aaaccgttga ttcaaaaccc gtttcagtct ggtggattat
     3301 tacgaaaccc caaatcaaaa catgccggaa agtttctaac tttgcctgag ttcttggagc
     3361 ttgctaagaa gaattcgtca agtattctca tcggaatcca acatgctgcg tacttagcat
     3421 caaaaaaagg tcttgacatt attagtacag tcaacggtgc actcaagaaa acaaatttga
     3481 acccgaaaca acaagttttg atccaatcag atgacacatc actgttggca aagttcaagg
     3541 catcatcacc gagttacaaa cgagttttgt tgtttagtaa agtgatcagt gatgcaccga
     3601 agcctgttat tgatgacatt aagaagtatg cggatgcagt gaatgtgggg aagaaatcaa
     3661 ttgttcagac gagtaaaatc tttttttcca ccggatcaac taagattatc gaaaaaatgc
     3721 atgcggcaaa catctcggtg tatgtctcag ggttctcgac ggagtcttta agcatgatgc
     3781 tcgatttcta tagcgatccg tacacggagc ttgtttcgtt ccttgaggag ggtgtagatg
     3841 gtgtgatcac cgataacccg aaaaccgcta gtgcatttat gagaagtcca tgtgttgacc
     3901 cgaaaagtac ggcgccgttc gttttccaac cgataaaacc aggggattac ttagctcaag
     3961 ttgaaccggc ggttttgccg ccagcagccg caccaattcc tccacttcag gtgagagatg
     4021 ttgtcgatcc gccactgcct ccggtgaatg ctgctgcacg caaagatgaa tccgacaaga
     4081 atgatgaaaa gtcaaaatcg gggctacgga aaaatgatgt tgatgtggtg tcaatgatgt
     4141 tattgttgtt gattgggtgg gttcttgtaa ttggatgttg attgaaggta ctatctgttt
     4201 gggatgaaag ggacttgtgt ttgtaccatt ggaaactgta gtattgttgt atgaaacttg
     4261 gtagtgtgaa ttgtacttta aatttaggta gatagctaaa ctatagttat aagttgttag
     4321 tgtatgaatt tttttaacca tttgttatca atattatgct tctaaagatt taacttgatc
     4381 a
//
LOCUS       XM_071886096            1115 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904161), mRNA.
ACCESSION   XM_071886096
VERSION     XM_071886096.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1115
                     /gene="LOC139904161"
                     /note="uncharacterized LOC139904161; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904161"
     CDS             265..786
                     /gene="LOC139904161"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742197.1"
                     /db_xref="GeneID:139904161"
                     /translation="MTRRSGSCLKSCLVIFAVISALCVSGPAIYWKIKKGFNLKGGSS
                     ISCNPCICDCPPPLSLLKLAPGLANLSVSDCGKDDPDLKEEMEKQFVDLLSEELKLQE
                     TVSEEHIHHMNITFGEARRVAAQYQKEAEKCNTATETCEQARERAEALMRQEKKITSL
                     WERRARQLGWEGQ"
     misc_feature    280..777
                     /gene="LOC139904161"
                     /note="Protein of unknown function (DUF1068); Region:
                     DUF1068; pfam06364"
                     /db_xref="CDD:399393"
ORIGIN      
        1 atttccccaa tgggtcatat agcaaacaat tcgggttagt cagtcgtcgg tgatcaccca
       61 tattctcttc taaaaatatt caaaatcaat aatgtgaaca cccaattccc aaatcttaaa
      121 aagtcactaa aattcccata caccgttggt ttcttaaatt aaacaatgtc acttaattag
      181 atccgactca aagttattat actcgtacac acttttaaac gaaatagcat tagatataaa
      241 gattagatct ttcggtttag aaagatgaca cggagatctg gatcctgttt aaaaagctgt
      301 ttagtgatat ttgcagtgat ttcagcactg tgtgtatctg ggccagctat ttattggaaa
      361 attaaaaaag gttttaattt aaaaggtggt tcctcaattt cttgtaatcc atgtatatgt
      421 gattgccctc cacctctctc acttctcaaa cttgctcctg gcttggcaaa tctttcagtt
      481 tcagattgtg ggaaggatga tccagatcta aaggaagaaa tggaaaagca atttgtagat
      541 ttactatcag aagaactaaa actgcaggaa acagtcagtg aagaacacat tcatcatatg
      601 aacatcacat ttggtgaagc aagaagagta gccgcacagt accaaaaaga ggctgaaaaa
      661 tgcaacaccg ctactgaaac atgtgaacaa gcgagagaac gggccgaagc tttaatgaga
      721 caagaaaaga aaataacttc tttatgggag cgaagagcta gacaacttgg ttgggaagga
      781 caataattta ttaattactt caaaaatttc caggtttctt ttttctatca ttcttttttt
      841 aatccggttg tgcgatcctt atcagtgttg tactttgtga atttttatag atacttacag
      901 ttacagtaag taattttggt accatgggac caaagttgcc cttaagtaat caatcataca
      961 cgttgcataa ttcatgtgtc gcatgttcga tagttataat caaagttatc agctgggtga
     1021 tcccatgtgt ttagaacttt tgatgtaatg ttgttctttg aagttgtatc gattgttgtg
     1081 taatatgtaa tgtaatatta tatcctaatt tattt
//
LOCUS       XM_071886097            2217 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides two-component response
            regulator ORR24-like (LOC139904162), transcript variant X1, mRNA.
ACCESSION   XM_071886097
VERSION     XM_071886097.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2217
                     /gene="LOC139904162"
                     /note="two-component response regulator ORR24-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 19 Proteins"
                     /db_xref="GeneID:139904162"
     CDS             192..2003
                     /gene="LOC139904162"
                     /codon_start=1
                     /product="two-component response regulator ORR24-like
                     isoform X1"
                     /protein_id="XP_071742198.1"
                     /db_xref="GeneID:139904162"
                     /translation="MTVEEIRGAVGVSNEIDRFPIGMRVLAVDDDPTCLKLLDVLLRK
                     CQYQVTTTNQAITALKMLRENRNRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLS
                     GNSDPKLVMKGVTHGACDYLVKPVRLEELRNVWQHVIRRKVETKSQSKSNNNQDKSNH
                     ECGQEAGSGDSNGKLNRKRKDEDEDIEDNENEDDDSSTQKKPRVVWSIDLHRKFVAAV
                     NQLGIEKAVPKRILDLMNVEGLTRENVASHLQKYRLYLRRISQQSNMVVAFGGSNDAS
                     SYMRMNSLDGLGDFHSLSASGRLSNSQLSSSYGMLGRLNSATGMTLNSLTSPSLIQPS
                     HAPNLTNSISNLQSVVLPTPSNHQTPNVLQGIPTSFDLGHLQQSNKLNTQLSGFNTAD
                     DSRIFNGCSNFSTLGNQSSSNLVSSSSTFHDVTPPMGRNFHDSNSNLKFGYNPSSNPI
                     NGFGSNIAGTASVPIEGQSQSQRHGQYGKQSYGQYSSNAFSTLAGAGPTHTGGSLSGP
                     VSQANDQNCGVYSRSNILPMQRNREARRSSTELKMQSGENYLLEQNKLPNDFVANNGY
                     DSLDDLMNGVMKREQDPTVMMDGEFGFDPYSFGSCIR"
     misc_feature    264..608
                     /gene="LOC139904162"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; Region: REC_typeB_ARR-like; cd17584"
                     /db_xref="CDD:381121"
     misc_feature    792..953
                     /gene="LOC139904162"
                     /note="myb-like DNA-binding domain, SHAQKYF class; Region:
                     myb_SHAQKYF; TIGR01557"
                     /db_xref="CDD:130620"
ORIGIN      
        1 tctctctaat atctttgaaa ttaaatcttt tttctttctg ggtttgtttt gtttgtcaac
       61 aaggtagtca aacaaatgat aaaaatccaa actttgtgaa tcttgtggtg cttcttgaat
      121 ctttaacttt gttctgctcc tgctttgcta ttttgtgggt ttatttattg attttaattc
      181 aagaatataa gatgactgtg gaggaaatta gaggggctgt tggggttagt aatgaaattg
      241 acagatttcc aattggtatg agagttcttg ctgttgatga tgatccaact tgtttaaagc
      301 ttttagatgt gcttttaagg aaatgccaat atcaagttac aaccacaaat caagcaataa
      361 cagcattgaa gatgttaagg gaaaatcgaa atcgttttga ccttgtgatc agtgatgtgc
      421 atatgccaga catggacgga ttcaagcttc ttgaacttgt tggtcttgaa atggacttac
      481 ctgttatcat gttatcggga aatagtgacc cgaaacttgt aatgaaaggg gtcactcatg
      541 gtgcttgtga ctaccttgtg aaacccgttc gccttgagga attacgcaat gtatggcaac
      601 atgtgattag gagaaaagtt gagacaaagt ctcagtcaaa gtcaaacaat aaccaagata
      661 agtcgaatca cgaatgtgga caagaagctg gtagtggaga ttcaaatggg aaacttaata
      721 ggaaaagaaa agatgaagat gaagatattg aagataatga gaatgaagat gatgactcat
      781 caacgcaaaa gaagccacgt gttgtttggt ccattgatct tcatagaaaa ttcgtagccg
      841 ctgttaatca acttgggatc gagaaagctg ttcctaaaag gattcttgat ttgatgaatg
      901 ttgaaggtct tactagagaa aatgttgcaa gccatctcca gaaatatcgt ctttacttaa
      961 gaaggatcag tcaacaatcg aacatggttg tggcatttgg tggtagcaac gacgcgtctt
     1021 cttatatgag aatgaattca cttgatgggc ttggagactt tcattcgtta tcagcttccg
     1081 gaagattgtc gaattctcag ttatcatcat cgtatggtat gcttggtaga ctcaatagtg
     1141 caaccgggat gacccttaac agcctcacgt caccttcatt gatccaacca agtcatgctc
     1201 caaacttgac caattcgatc agcaacttac aatcggttgt attaccaaca ccatcaaatc
     1261 accaaacccc aaatgttctg cagggtatac cgacatcttt tgatctcggt catcttcaac
     1321 agagtaataa attgaatacc caactctcgg gattcaatac cgctgatgat tctcgaatct
     1381 ttaatggttg tagcaacttt tcaacgttag ggaatcaatc ttcttcgaac cttgtttcaa
     1441 gtagttccac ctttcatgat gttacgccgc caatggggag aaattttcac gactcgaata
     1501 gtaacctaaa atttggctat aatcctagca gtaacccaat taacggattt ggttctaata
     1561 ttgctggcac agcctctgta cctattgaag gtcaaagtca aagtcagagg catggacagt
     1621 atggtaaaca aagttatggt cagtattcaa gtaatgcttt tagtacgcta gccggtgcag
     1681 gaccaactca cacgggtggt agtttgagtg gacccgtgag tcaagcgaat gaccaaaatt
     1741 gtggggtcta cagtaggtca aatatactcc ctatgcagcg gaacagagag gcccgtaggt
     1801 caagtaccga actgaaaatg caatctggtg aaaactattt attggagcag aataaattac
     1861 ctaatgattt tgttgcaaac aacggttatg attccttgga tgatcttatg aatggagtga
     1921 tgaaacggga gcaggatcca acggtcatga tggatggaga atttggattt gatccgtatt
     1981 ctttcggatc ttgtatacga tgatgataca ttaattagct cttaactcct agagacgata
     2041 aaatgaggct gcgacgacaa gataggttta atgaaatgag aagtttgtgt taatttaatc
     2101 tgtaatatat cttcatggac tatttatgtg tagcgtcttt catttctgga atccattttc
     2161 gggtccctaa ttcccttgct cctaatggtc ttaatgcaaa actgaagtag tgtttct
//
LOCUS       XM_071886098            2211 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides two-component response
            regulator ORR24-like (LOC139904162), transcript variant X2, mRNA.
ACCESSION   XM_071886098
VERSION     XM_071886098.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2211
                     /gene="LOC139904162"
                     /note="two-component response regulator ORR24-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139904162"
     CDS             192..1997
                     /gene="LOC139904162"
                     /codon_start=1
                     /product="two-component response regulator ORR24-like
                     isoform X2"
                     /protein_id="XP_071742199.1"
                     /db_xref="GeneID:139904162"
                     /translation="MTVEEIRGAVGVSNEIDRFPIGMRVLAVDDDPTCLKLLDVLLRK
                     CQYQVTTTNQAITALKMLRENRNRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLS
                     GNSDPKLVMKGVTHGACDYLVKPVRLEELRNVWQHVIRRKVETKSQSKSNNNQDKSNH
                     ECGQEAGSGDSNGKLNRKRKDEDEDIEDNENEDDDSSTQKKPRVVWSIDLHRKFVAAV
                     NQLGIEKAVPKRILDLMNVEGLTRENVASHLQKYRLYLRRISQQSNMVVAFGGSNDAS
                     SYMRMNSLDGLGDFHSLSASGRLSNSQLSSSYGMLGRLNSATGMTLNSLTSPSLIQPS
                     HAPNLTNSISNLQSVVLPTPSNHQTPNVLQGIPTSFDLGHLQQSNKLNTQLSGFNTAD
                     DSRIFNGCSNFSTLGNQSSSNLVSSSSTFHDVTPPMGRNFHDSNSNLKFGYNPSSNPI
                     NGFGSNIAGTASVPIEGQSQSQRHGQYGKQSYGQYSSNAFSTLAGAGPTHTGGSLSGP
                     VSQANDQNCGVYSRSNILPMQRNREARRSSTELKMQSGENYLLEQNKLPNDFVANNGY
                     DSLDDLMNGVMKRDPTVMMDGEFGFDPYSFGSCIR"
     misc_feature    264..608
                     /gene="LOC139904162"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; Region: REC_typeB_ARR-like; cd17584"
                     /db_xref="CDD:381121"
     misc_feature    792..953
                     /gene="LOC139904162"
                     /note="myb-like DNA-binding domain, SHAQKYF class; Region:
                     myb_SHAQKYF; TIGR01557"
                     /db_xref="CDD:130620"
ORIGIN      
        1 tctctctaat atctttgaaa ttaaatcttt tttctttctg ggtttgtttt gtttgtcaac
       61 aaggtagtca aacaaatgat aaaaatccaa actttgtgaa tcttgtggtg cttcttgaat
      121 ctttaacttt gttctgctcc tgctttgcta ttttgtgggt ttatttattg attttaattc
      181 aagaatataa gatgactgtg gaggaaatta gaggggctgt tggggttagt aatgaaattg
      241 acagatttcc aattggtatg agagttcttg ctgttgatga tgatccaact tgtttaaagc
      301 ttttagatgt gcttttaagg aaatgccaat atcaagttac aaccacaaat caagcaataa
      361 cagcattgaa gatgttaagg gaaaatcgaa atcgttttga ccttgtgatc agtgatgtgc
      421 atatgccaga catggacgga ttcaagcttc ttgaacttgt tggtcttgaa atggacttac
      481 ctgttatcat gttatcggga aatagtgacc cgaaacttgt aatgaaaggg gtcactcatg
      541 gtgcttgtga ctaccttgtg aaacccgttc gccttgagga attacgcaat gtatggcaac
      601 atgtgattag gagaaaagtt gagacaaagt ctcagtcaaa gtcaaacaat aaccaagata
      661 agtcgaatca cgaatgtgga caagaagctg gtagtggaga ttcaaatggg aaacttaata
      721 ggaaaagaaa agatgaagat gaagatattg aagataatga gaatgaagat gatgactcat
      781 caacgcaaaa gaagccacgt gttgtttggt ccattgatct tcatagaaaa ttcgtagccg
      841 ctgttaatca acttgggatc gagaaagctg ttcctaaaag gattcttgat ttgatgaatg
      901 ttgaaggtct tactagagaa aatgttgcaa gccatctcca gaaatatcgt ctttacttaa
      961 gaaggatcag tcaacaatcg aacatggttg tggcatttgg tggtagcaac gacgcgtctt
     1021 cttatatgag aatgaattca cttgatgggc ttggagactt tcattcgtta tcagcttccg
     1081 gaagattgtc gaattctcag ttatcatcat cgtatggtat gcttggtaga ctcaatagtg
     1141 caaccgggat gacccttaac agcctcacgt caccttcatt gatccaacca agtcatgctc
     1201 caaacttgac caattcgatc agcaacttac aatcggttgt attaccaaca ccatcaaatc
     1261 accaaacccc aaatgttctg cagggtatac cgacatcttt tgatctcggt catcttcaac
     1321 agagtaataa attgaatacc caactctcgg gattcaatac cgctgatgat tctcgaatct
     1381 ttaatggttg tagcaacttt tcaacgttag ggaatcaatc ttcttcgaac cttgtttcaa
     1441 gtagttccac ctttcatgat gttacgccgc caatggggag aaattttcac gactcgaata
     1501 gtaacctaaa atttggctat aatcctagca gtaacccaat taacggattt ggttctaata
     1561 ttgctggcac agcctctgta cctattgaag gtcaaagtca aagtcagagg catggacagt
     1621 atggtaaaca aagttatggt cagtattcaa gtaatgcttt tagtacgcta gccggtgcag
     1681 gaccaactca cacgggtggt agtttgagtg gacccgtgag tcaagcgaat gaccaaaatt
     1741 gtggggtcta cagtaggtca aatatactcc ctatgcagcg gaacagagag gcccgtaggt
     1801 caagtaccga actgaaaatg caatctggtg aaaactattt attggagcag aataaattac
     1861 ctaatgattt tgttgcaaac aacggttatg attccttgga tgatcttatg aatggagtga
     1921 tgaaacggga tccaacggtc atgatggatg gagaatttgg atttgatccg tattctttcg
     1981 gatcttgtat acgatgatga tacattaatt agctcttaac tcctagagac gataaaatga
     2041 ggctgcgacg acaagatagg tttaatgaaa tgagaagttt gtgttaattt aatctgtaat
     2101 atatcttcat ggactattta tgtgtagcgt ctttcatttc tggaatccat tttcgggtcc
     2161 ctaattccct tgctcctaat ggtcttaatg caaaactgaa gtagtgtttc t
//
LOCUS       XM_071886099            1310 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904164), mRNA.
ACCESSION   XM_071886099
VERSION     XM_071886099.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1310
                     /gene="LOC139904164"
                     /note="uncharacterized LOC139904164; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 66
                     Proteins"
                     /db_xref="GeneID:139904164"
     CDS             206..1108
                     /gene="LOC139904164"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742200.1"
                     /db_xref="GeneID:139904164"
                     /translation="MGNVTSNVAAKFAFFPPDPPTYDVFKDDDDPITGETRFVFTGIT
                     ADKNVDVHLLDTKGGNKVVATYWKHPFGKLTLLYSHGNAADLGQMKELFNELRAHLRV
                     NIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKNNYGTRQEDMVLYGQSVGSGPTLH
                     LASRLQRLRGVVLHSAILSGIRVLYPTVKMTFWFDIFKNIDKVQKVSCPILVMHGTND
                     DIVDFSHGRRLWELAKDKYDPLWVQGGGHSNLESFPEYIRHLRKFIKAMEKLSSKQSK
                     QRLSSVPIIKEEAKHNRCLRFGIK"
     misc_feature    365..1003
                     /gene="LOC139904164"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; Region:
                     FrsA; COG1073"
                     /db_xref="CDD:440691"
ORIGIN      
        1 catacaactg aaaatagaca tcatcgccct tcctcactca aaaacaaaaa atcaatataa
       61 acattctttt aaagatttga tttttcaaaa ctttcgaggg aaatcaatca aacccagata
      121 aaaagattgc atctttcatc tgggtttcaa tttattgggg taaattaatg atcttgatga
      181 ggtggacttt tattattttt caagaatggg aaatgtaacc tcaaatgttg ctgcaaagtt
      241 tgcatttttt ccacccgacc caccaacata tgatgttttt aaagatgatg atgatccaat
      301 aacgggtgaa acaaggtttg tttttacagg aattacagca gataaaaacg ttgatgttca
      361 tttacttgat acaaaaggcg ggaacaaagt tgttgctaca tattggaaac atccttttgg
      421 gaagttgact cttttgtatt ctcatggtaa cgctgctgat ttgggtcaga tgaaagaact
      481 gtttaatgag cttagagctc atctcagagt caatattatg agttatgact attcgggata
      541 tggagcttcc actggcaagc catctgaatt taatacgtac tacgatattg aggccgtcta
      601 caattgtttg aaaaacaatt atggaactag gcaagaagac atggtcttat atggacaatc
      661 ggttggcagc gggcccactt tacacttggc ttctagacta caacgattaa gaggcgttgt
      721 tctacatagt gctattcttt caggaatacg tgttctgtat cctactgtca aaatgacctt
      781 ctggtttgac attttcaaga atatcgacaa agtacagaaa gtcagctgtc cgattctggt
      841 tatgcatggt acgaatgatg atattgttga tttttcgcat gggaggagat tatgggaact
      901 tgcaaaagac aaatatgatc cattgtgggt ccagggtggt ggtcattcta acctcgaaag
      961 tttcccagag tacatacgac acttacgcaa gtttataaaa gcaatggaga agctctcctc
     1021 caaacagagc aagcaacgcc tttcttcagt cccgattatt aaagaagaag ccaaacacaa
     1081 cagatgtttg agattcggaa taaagtgacc ctgtttttct cgtttgtaat taaaattatg
     1141 gctgttggat ctttttgtaa gaatgtatgt tttcgtgttt atgctggttt gattgattgc
     1201 ctgattgtaa ttagagtgtt gatttttgtg aggatgttta gagatattcg atttgttgtt
     1261 attcaattaa aggaggatat tttgtaaagc cgaactggaa caaatcaaga
//
LOCUS       XM_071886100            1461 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904165), mRNA.
ACCESSION   XM_071886100
VERSION     XM_071886100.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1461
                     /gene="LOC139904165"
                     /note="uncharacterized LOC139904165; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904165"
     CDS             120..1253
                     /gene="LOC139904165"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742201.1"
                     /db_xref="GeneID:139904165"
                     /translation="MFSSALYNAQTPTVLFSSVSQSPLKTFTTSSKLNCSIRLSMASS
                     VRIVIVGDIHDDWNLLEDSKALELLQPDLVLFTGDFGNENVELVRSIAALKMTKAAIL
                     GNHDAWKTHNFSDKKKDKDGVQLQLESFGEEHVGYKRLDFHSLKLSVIGGRPFSCGGE
                     RLFRKQLLAKRYGVHNMNESANRISEAALGTPNNHSVILLAHNGPTGLGSNMNDICGR
                     DWVPGGGDHGDPDLAVAISQLKGNTKHCVTLVVFGHMHKELAFGNGQRKMIVIGDDNT
                     IYLNGAIVPRVKRFYCDKQQTHSTSSSSSTTDTLSPNSEGTLRAFTLVESKEGKLEKI
                     AETWVSVIGDNTNVVEEHILLSNNVCTTSNLRKYKFCSCCGLL"
     misc_feature    252..977
                     /gene="LOC139904165"
                     /note="Nostoc DevT and similar proteins,
                     metallophosphatase domain; Region: MPP_NostocDevT-like;
                     cd07397"
                     /db_xref="CDD:277342"
     misc_feature    order(273..275,279..281,354..356,429..434,723..725,
                     879..881,885..887)
                     /gene="LOC139904165"
                     /note="putative active site [active]"
                     /db_xref="CDD:277342"
     misc_feature    order(273..275,279..281,354..356,429..431,723..725,
                     879..881,885..887)
                     /gene="LOC139904165"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:277342"
ORIGIN      
        1 attgataaat gatagtctaa aatatattta aatttatatg tatatattaa aacctgaata
       61 tatatctaag caaccgatta attagtcata gttgttaggt acgaatatac gattaatcta
      121 tgttttcaag cgcgttatat aacgcgcaaa ctccgacggt cctctttagt tccgttagtc
      181 aatcaccatt aaagacgttt actacttcgt caaaactcaa ctgcagtatt cgtttatcga
      241 tggcatcatc cgttagaatc gtcatcgtcg gagacattca tgatgattgg aatctgctag
      301 aagattcgaa agctcttgag ctgctacagc cagatttggt gctgtttaca ggtgattttg
      361 gcaatgaaaa tgttgaactt gttagaagta ttgctgcact caaaatgact aaagcagcta
      421 ttttagggaa ccatgatgct tggaagacac ataatttttc tgacaagaag aaagataaag
      481 atggtgtcca gctccagctg gaaagttttg gagaagagca tgttggttac aaacgtttgg
      541 actttcattc gttgaagctg agtgttatag gcgggcgccc tttttcttgt ggaggtgaaa
      601 ggttatttag aaaacaactt ctggctaaaa gatatggagt tcacaacatg aatgagagtg
      661 caaatagaat ctctgaagct gctttgggga caccaaacaa tcattccgtt attcttcttg
      721 ctcacaatgg gcccacaggt cttggttcca acatgaatga catttgtgga agagattggg
      781 tgcctggagg tggagaccat ggtgatccag atttagcggt tgctatttct caactaaaag
      841 gcaacaccaa acattgtgtt acattggtag tgtttggtca catgcataaa gagctggcat
      901 ttggaaacgg tcaacgtaaa atgattgtga ttggggatga caacaccata tacctaaacg
      961 gggccatcgt tcctagggtc aaaagattct attgtgacaa acaacaaact catagcacca
     1021 gcagcagcag ctcaaccact gacactttgt caccaaactc agaaggtaca ttgcgagcct
     1081 ttactttagt agagtcgaag gaaggaaaac tagagaaaat tgcagaaact tgggtttcgg
     1141 ttattggaga taacaccaat gtcgtcgagg aacatatact tttaagtaat aacgtttgta
     1201 ctacatctaa cctaagaaaa tataaatttt gttcttgctg tggattgttg tagggaaagc
     1261 taatagttat accaaaagcc tgttagtact gatagtgtaa actcgttaca tatatgtatg
     1321 cacttattgt agttcgaatc tttataatgc aagtctgatg acgacgcaag gtgaaggtaa
     1381 ggtaaaactc tctgaaaggc gtaatacatg ttacctgtac attttattct tgtaatgtaa
     1441 tactccgtaa ttatttgtgt a
//
LOCUS       XM_071886101             841 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904166), transcript variant X1, mRNA.
ACCESSION   XM_071886101
VERSION     XM_071886101.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..841
                     /gene="LOC139904166"
                     /note="uncharacterized LOC139904166; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139904166"
     CDS             114..779
                     /gene="LOC139904166"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742202.1"
                     /db_xref="GeneID:139904166"
                     /translation="MPRVSKRKSEPVRSSEPAAKKQTKEVERIDSLFASYANASLDLI
                     DPEGIEKLCSDLSVEYTDVRILMLAWKMNAKKQGYFTQDEWRAGLKSLHADTVRKLKN
                     KLPELQKEVAKKENFEDFYYFSFRYCLTEDKQKTLDIESACMLLDLVLGPYFRLQVDS
                     FVEYLKIQKEYKAINMDQWTNFLRFCQEIEFPDLVKYDACQAWPLILDNFVDWLRGKS
                     TSA"
     misc_feature    408..752
                     /gene="LOC139904166"
                     /note="Cullin binding; Region: Cullin_binding; pfam03556"
                     /db_xref="CDD:460971"
ORIGIN      
        1 ccttcctagc aaataataag tccccaaaac caaaaacccc taaaactctt caaacccttc
       61 ttccgtacat cttcaattta attttcaaaa taataaattg ttataaatca acaatgcctc
      121 gtgtttcaaa gaggaaatcg gaacctgtta gatcatctga gcctgctgca aagaaacaaa
      181 caaaggaagt ggagcgaata gacagcttat ttgcgtcata tgctaatgct tcactagact
      241 tgattgatcc agaaggaatt gagaagcttt gttctgatct ttctgttgag tacaccgatg
      301 tcagaatctt gatgcttgct tggaagatga atgctaagaa gcaggggtac tttacacagg
      361 atgaatggcg ggcgggtcta aagtcactac atgctgacac tgttcgaaag ttgaaaaata
      421 aactccctga gttgcagaaa gaggtggcta agaaagaaaa tttcgaggat ttctattact
      481 tttctttccg ttactgtttg actgaggata agcagaagac cttagatatc gagagtgctt
      541 gcatgttgct cgatcttgtt ctagggccgt attttcgtct tcaagtagac tcattcgtcg
      601 agtatctaaa gatccagaag gagtataagg cgataaatat ggatcagtgg acaaactttc
      661 tccgtttttg tcaggagata gagtttccag atcttgtgaa gtatgatgcc tgccaagcat
      721 ggcctttgat tctcgacaat tttgtagact ggctgagagg aaagtccacg tcagcataat
      781 attttgatat gtgattaccc tcattgtatg ttgctgctta tacaaggaat tatatacaac
      841 g
//
LOCUS       XM_071886102             833 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904166), transcript variant X2, mRNA.
ACCESSION   XM_071886102
VERSION     XM_071886102.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..833
                     /gene="LOC139904166"
                     /note="uncharacterized LOC139904166; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139904166"
     CDS             114..779
                     /gene="LOC139904166"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742203.1"
                     /db_xref="GeneID:139904166"
                     /translation="MPRVSKRKSEPVRSSEPAAKKQTKEVERIDSLFASYANASLDLI
                     DPEGIEKLCSDLSVEYTDVRILMLAWKMNAKKQGYFTQDEWRAGLKSLHADTVRKLKN
                     KLPELQKEVAKKENFEDFYYFSFRYCLTEDKQKTLDIESACMLLDLVLGPYFRLQVDS
                     FVEYLKIQKEYKAINMDQWTNFLRFCQEIEFPDLVKYDACQAWPLILDNFVDWLRGKS
                     TSA"
     misc_feature    408..752
                     /gene="LOC139904166"
                     /note="Cullin binding; Region: Cullin_binding; pfam03556"
                     /db_xref="CDD:460971"
     polyA_site      833
                     /gene="LOC139904166"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccttcctagc aaataataag tccccaaaac caaaaacccc taaaactctt caaacccttc
       61 ttccgtacat cttcaattta attttcaaaa taataaattg ttataaatca acaatgcctc
      121 gtgtttcaaa gaggaaatcg gaacctgtta gatcatctga gcctgctgca aagaaacaaa
      181 caaaggaagt ggagcgaata gacagcttat ttgcgtcata tgctaatgct tcactagact
      241 tgattgatcc agaaggaatt gagaagcttt gttctgatct ttctgttgag tacaccgatg
      301 tcagaatctt gatgcttgct tggaagatga atgctaagaa gcaggggtac tttacacagg
      361 atgaatggcg ggcgggtcta aagtcactac atgctgacac tgttcgaaag ttgaaaaata
      421 aactccctga gttgcagaaa gaggtggcta agaaagaaaa tttcgaggat ttctattact
      481 tttctttccg ttactgtttg actgaggata agcagaagac cttagatatc gagagtgctt
      541 gcatgttgct cgatcttgtt ctagggccgt attttcgtct tcaagtagac tcattcgtcg
      601 agtatctaaa gatccagaag gagtataagg cgataaatat ggatcagtgg acaaactttc
      661 tccgtttttg tcaggagata gagtttccag atcttgtgaa gtatgatgcc tgccaagcat
      721 ggcctttgat tctcgacaat tttgtagact ggctgagagg aaagtccacg tcagcataat
      781 attttgatat gtgattaccc tcattgtatg ttgctgctta tacaaggtat aat
//
LOCUS       XR_011778689             520 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein eL39z/eL39x (LOC139904167), transcript variant X1,
            misc_RNA.
ACCESSION   XR_011778689
VERSION     XR_011778689.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..520
                     /gene="LOC139904167"
                     /note="large ribosomal subunit protein eL39z/eL39x;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins"
                     /db_xref="GeneID:139904167"
     misc_RNA        1..520
                     /gene="LOC139904167"
                     /product="large ribosomal subunit protein eL39z/eL39x,
                     transcript variant X1"
                     /db_xref="GeneID:139904167"
ORIGIN      
        1 ctttcattgg gctttattag gtatcaatac tgtatctaac acccataaaa cccccaaatc
       61 atagctacag ccaacagcag taaccatcca taaacaagca gaaggagctc ctgtcccgtt
      121 aacaatcgcc atgccgtccc acaagagttt catgatcaag aagaagctag gtaagaagat
      181 gaggcagaac aggcccattc cccattggat tcgcatgagg accgacaaca ctatcaggta
      241 caacgcaaag cgtaggcact ggcgcagaac caagcttggg ttctaattgc atctgctgtt
      301 tactgagttc aatccagact atgttttgtc tgtactttct tatttagcca gtaatggata
      361 atggtttaat attcgtttct tctgggaatg ttatgatact tctatttaat tacatatttg
      421 ctttatgtaa ccttaattga tgctagactg ttttatattt ttatcctgca tttacaaata
      481 cagtttccat ctttctttaa agtacaataa caatattatt
//
LOCUS       XM_071886103             401 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein eL39z/eL39x (LOC139904167), transcript variant X2, mRNA.
ACCESSION   XM_071886103
VERSION     XM_071886103.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..401
                     /gene="LOC139904167"
                     /note="large ribosomal subunit protein eL39z/eL39x;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins"
                     /db_xref="GeneID:139904167"
     CDS             131..286
                     /gene="LOC139904167"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL39z/eL39x"
                     /protein_id="XP_071742204.1"
                     /db_xref="GeneID:139904167"
                     /translation="MPSHKSFMIKKKLGKKMRQNRPIPHWIRMRTDNTIRYNAKRRHW
                     RRTKLGF"
     misc_feature    158..280
                     /gene="LOC139904167"
                     /note="Ribosomal L39 protein; Region: Ribosomal_L39;
                     pfam00832"
                     /db_xref="CDD:425894"
ORIGIN      
        1 ctttcattgg gctttattag gtatcaatac tgtatctaac acccataaaa cccccaaatc
       61 atagctacag ccaacagcag taaccatcca taaacaagca gaaggagctc ctgtcccgtt
      121 aacaatcgcc atgccgtccc acaagagttt catgatcaag aagaagctag gtaagaagat
      181 gaggcagaac aggcccattc cccattggat tcgcatgagg accgacaaca ctatcaggta
      241 caacgcaaag cgtaggcact ggcgcagaac caagcttggg ttctaattgc atctgctgtt
      301 tactgagttc aatccagact atgttttgtc tgtactttct tatttagcca gtaatggata
      361 atggtttaat attcgtttct tctgggaatg ttattttttt t
//
LOCUS       XM_071886104            2681 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATPase 9, plasma
            membrane-type-like (LOC139904168), mRNA.
ACCESSION   XM_071886104
VERSION     XM_071886104.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2681
                     /gene="LOC139904168"
                     /note="ATPase 9, plasma membrane-type-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 86 Proteins"
                     /db_xref="GeneID:139904168"
     CDS             1..2553
                     /gene="LOC139904168"
                     /codon_start=1
                     /product="ATPase 9, plasma membrane-type-like"
                     /protein_id="XP_071742205.1"
                     /db_xref="GeneID:139904168"
                     /translation="MADNSLEQVRSNQVDLEKLPIEDVFTILNCTRDGLPDDEGANRL
                     KIFGYNKLEEKKENKLLKFLGFMWNPLSWVMEFAAIMAIVLANGGGRPPDWPDFVGIV
                     ALLLINSTISYVEESNAGNAAAALMASLAPKCKLLRNGKWSEQDAAILVPGDIISVKL
                     GDIIPADARLLEGDTLKIDQSALTGESIPVTKNPGEAVFSGSTCKQGEIEAVVIATGT
                     RTFFGKAAHLVDNTDQAGHFQQVLTSIGNFCICSIAIGMAIEIVVIYAVQRRAYRDGI
                     DNLLILLIGGIPIAMPTVLSVTMAIGSHYLSKEGAITKRMTAIEEMAGMDILCSDKTG
                     TLTLNKLTVDKSLIEVFVKDCDKDMVVLYGARASRIENQDAIDACIVNMLANPKEARA
                     GIKEVHFLPFNPVEKRTAITYIDDKGDWSRLSKGAPEQIIELCELKGDMLNRAHNIID
                     GFANRGLRSLAVGRQTVPEKTKEGTGTPWEFVGLLPLFDPPRHDSAETIRKALELGVK
                     VKMITGDQLAIGKETGRRLGMGTDMYPSSSLLSQNNTDNDASIDQLIERADGFAGVFP
                     EHKYEIVKRLQQRNHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIILTEPG
                     LNVIVSAVLTSRAIFQRMKNYTIYAVTITVRIVMGFMLITLIWKFDFSPFMILIIALL
                     NDSTIMTISTDRVKPSPTPDTWRLNEIFATGVVLGTYLALVSVLFFWLAARTDFFPRI
                     FGVRSIIGNDDEITAALYLQVSIISQALIFVTRSQSWSFLERPGFLLMLAFALAQILA
                     TLLAVYADWDFAEMQGIGWRWAGVIWIFTIVTYIPLDILKFIIHVPLSGSSR"
     misc_feature    100..2412
                     /gene="LOC139904168"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     Region: ATPase-IIIA_H; TIGR01647"
                     /db_xref="CDD:273731"
ORIGIN      
        1 atggctgata attccttgga acaagttaga agtaaccaag ttgatcttga gaaactccct
       61 atcgaagacg ttttcaccat cttaaactgt acgagggatg ggttgcccga tgacgaaggc
      121 gcaaataggc tcaaaatctt tggctacaat aagcttgagg agaaaaagga aaataaactt
      181 ctcaagtttc tagggttcat gtggaatcct ctttcatggg tcatggaatt tgcagccatc
      241 atggccattg ttttagccaa cggtggtggg cgaccaccag attggccaga ttttgtaggc
      301 atagttgcgc ttcttctgat caactcaacc ataagttacg tcgaagaaag taacgccggc
      361 aatgcagctg ccgccctgat ggcaagcctc gccccaaaat gtaaactttt aaggaacgga
      421 aaatggagcg agcaggatgc tgctatcttg gttccagggg atataattag cgtcaagcta
      481 ggagatatta tcccagctga cgctcgcctt cttgaaggag atactttaaa aattgaccaa
      541 tctgccctta ccggtgagtc catcccggtg accaagaacc ccggtgaggc ggtgttctcg
      601 ggctcgacgt gcaagcaggg cgagatcgag gccgttgtta tagccaccgg tacccgaacc
      661 ttttttggga aggcggccca ccttgtggac aacaccgatc aagccggtca tttccaacag
      721 gtgttgactt ccatcggtaa cttctgcata tgctcgattg ctattggcat ggcgatcgag
      781 atagtagtga tatatgcagt tcaacgaaga gcatatagag acggtattga taatttgttg
      841 atccttctca ttggaggtat cccgatcgct atgcctacag ttttgtcggt gacaatggct
      901 attgggtccc actatctttc gaaagaaggt gccattacca agaggatgac tgctatcgag
      961 gaaatggcgg gaatggacat tctttgtagt gataaaacag gcacactcac tcttaacaaa
     1021 ctaaccgtcg acaaatcatt aatcgaggtt ttcgtgaaag attgcgacaa agacatggtt
     1081 gtgttgtacg gtgcccgagc ttcgaggatc gaaaaccaag acgcaattga tgcttgcatt
     1141 gtcaacatgt tggctaatcc aaaagaggcg agagccggaa tcaaagaggt gcactttttg
     1201 ccattcaatc cagttgagaa gcgcactgca attacctaca tcgacgacaa aggagactgg
     1261 tctcgattaa gcaagggtgc accagaacaa atcatcgaat tatgtgaact taaaggtgat
     1321 atgctaaatc gagctcacaa tatcatcgat ggttttgcaa accgaggtct tcgatccttg
     1381 gccgttggtc gccaaactgt cccagaaaaa acaaaggagg gaacaggcac accatgggag
     1441 tttgttggat tgttgcctct ttttgatcca ccgagacatg atagcgcgga gactattcga
     1501 aaggctttgg aactgggtgt taaagttaag atgattaccg gagatcagct cgctattgga
     1561 aaggaaacag ggagacgact cggcatgggc acggatatgt atccttcttc ttcacttctc
     1621 tcacaaaaca acacggataa cgatgcgtcg atcgatcagc ttatcgaaag ggcagatggg
     1681 ttcgccggtg ttttcccaga gcacaagtac gagatagtta agagattaca acaaaggaat
     1741 cacatttgcg gtatgaccgg agatggtgtg aacgacgcac cagcattaaa acgggccgac
     1801 atcggaattg cggtggctga tgccacagac gccgccagga gtgcatctga tataatcctg
     1861 acagaaccag ggcttaatgt gatagttagc gctgtactaa caagccgagc catcttccaa
     1921 aggatgaaaa actacacaat ttatgctgtc acaatcaccg tcagaatcgt catggggttc
     1981 atgctcatca ctctcatatg gaagtttgat ttttcaccgt tcatgattct catcatagcc
     2041 ctcctcaacg atagtaccat catgacgatt tcaacggaca gggtaaaacc gtcacctaca
     2101 cctgacacgt ggaggctcaa tgaaatattc gctactggcg tcgtccttgg aacttatctt
     2161 gcactcgtaa gcgtactgtt cttttggctc gctgccagaa ccgacttctt tccgagaatc
     2221 tttggtgttc gctcgattat tggaaacgat gacgagatca ccgcggcact ctaccttcaa
     2281 gtgagcatca tcagccaggc actcatcttt gtgaccaggt ctcaaagttg gtcgtttctc
     2341 gagcgccctg gcttcttgct catgctcgca ttcgcactag ctcaaatttt ggctacgctg
     2401 ctggctgtat atgcagactg ggattttgca gagatgcaag gaataggatg gcgatgggcc
     2461 ggagtaatct ggatcttcac tattgttact tacatcccat tagatatcct taagttcatc
     2521 atccatgtac cattgagtgg atcctctaga tagctctgaa ttgaaactat gtatatcttt
     2581 agtctcaagg gtatgcagag tcgatgagga ggctaacggt gtcggtgtca ttacatttaa
     2641 tcaccaccaa aaaccatcat accatggaaa ttaaccggta g
//
LOCUS       XR_011778690             330 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904171), ncRNA.
ACCESSION   XR_011778690
VERSION     XR_011778690.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..330
                     /gene="LOC139904171"
                     /note="uncharacterized LOC139904171; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904171"
     ncRNA           1..330
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904171"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904171"
ORIGIN      
        1 atcaccgcca ccaccgccag tcgtcgtcgc cactgaacat caatcataat tgccttaatc
       61 ggcccaaaat cgaaggcagc agcaattgag gaatcagttc agatgaggag atttgcgttg
      121 attgcaaaac ttcgagaacg tcgttgtgaa gaagtgttcc ggctggtcct aaggtggtta
      181 ccaccaatga tttcttcaag attgttttaa tgagttcaaa tttaggtacg atggctgaaa
      241 aggaacaaga atttaagcct tcatttgatg agtatttaaa actaatgaaa actgttaaaa
      301 ttcgtagaga gaagcgtaag tccgtcaccg
//
LOCUS       XM_071886105            1514 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL7 (LOC139904172), mRNA.
ACCESSION   XM_071886105
VERSION     XM_071886105.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1514
                     /gene="LOC139904172"
                     /note="probable serine/threonine-protein kinase PBL7;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 88 Proteins"
                     /db_xref="GeneID:139904172"
     CDS             152..1363
                     /gene="LOC139904172"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL7"
                     /protein_id="XP_071742206.1"
                     /db_xref="GeneID:139904172"
                     /translation="MGCFLCAGGDSSTKKSSKNRRIEITHNDQSKPKTSVTIRVEGSN
                     ELKKENSQNIVQASISNERVEKNSPPAEGGPMNTAKTFTYAQLVNATDNFNRVYYLGE
                     GGFGKVYKGNLEDSDQVVAIKKLDREGLQGIREFVVEVLTLSMADHPNLVKLIGYCAE
                     GEQRLLVYEYMPLGSLEDHLHELRPNRKRLDWNTRMKIAAGAARGLEYLHDKMNPPVI
                     YRDLKGSNILLGEDYHTKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLT
                     FKSDIYSFGVVLLELITGRKAIDNTRPAAEQNLVAWARPLFKDRRKFSQMADPVLEGE
                     YPVRGLYQALAIAAMCVQEQPNMRPLVADVVTALNYLASQNYDPLTNPVQSSRRSSRR
                     QRSSGEKKPDV"
     misc_feature    449..1258
                     /gene="LOC139904172"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(449..463,473..475,512..514,518..520,605..607,
                     653..664,674..676,680..682,812..814,818..820,824..829,
                     833..835,866..868,875..877,929..940)
                     /gene="LOC139904172"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(449..463,473..475,512..514,518..520,605..607,
                     653..664,674..676,812..814,818..820,824..829,833..835,
                     866..868)
                     /gene="LOC139904172"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(461..463,674..676,680..682,812..814,818..820,
                     824..826,875..877,929..940)
                     /gene="LOC139904172"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(863..886,917..940)
                     /gene="LOC139904172"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     polyA_site      1514
                     /gene="LOC139904172"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtatttctct ctccggtctt aatttcaatt tgtttaaatt ctgagtcctc tgtagcagaa
       61 agcacaaatt atattggaaa attttatttt attttttata ttattcaaaa acaactatat
      121 agatagatag attgaaaata tatatattgg catgggttgc ttcctttgtg ctgggggaga
      181 ttcttcaaca aaaaaatcat caaaaaacag aagaattgaa attacccaca acgatcaatc
      241 aaaacccaaa acttctgtta cgataagagt cgaaggttct aatgaattaa agaaggaaaa
      301 ctcacaaaat atcgttcaag cttcgatttc aaatgagcgt gttgagaaga atagtccccc
      361 tgctgaggga ggacctatga acacagcaaa aacgtttacg tatgcacaat tagtgaatgc
      421 aactgataat tttaatcgtg tttattattt gggagagggt ggatttggca aagtctataa
      481 aggaaatttg gaagattctg atcaggttgt cgccattaag aaattggatc gtgaggggtt
      541 gcaaggaatt agggaattcg ttgttgaagt tttgacgtta agcatggctg atcatcctaa
      601 tcttgttaaa ttaatcggct attgtgctga aggagagcaa agattattgg tctatgaata
      661 catgccgtta ggttcattag aggaccattt gcatgaactt cgacccaaca ggaaacggct
      721 cgactggaat actaggatga aaattgctgc tggtgcagca agagggttag agtatttgca
      781 tgacaaaatg aacccacctg ttatttatcg agatttgaag gggtctaaca ttttgttggg
      841 tgaggattac cataccaagt tatcagattt tgggttggca aaagtgggcc caattggaga
      901 caaaactcac gtttcgactc gagtgatggg cacttacggt tattgtgctc ctgattatgc
      961 aatgaccggt caactcacgt tcaaatcaga tatttatagt tttggggtcg tattattgga
     1021 gctcattacg ggtagaaaag caatcgacaa tacaagacct gcggcagaac aaaatcttgt
     1081 ggcttgggca cgaccgttgt ttaaagacag gcgaaagttt tcgcaaatgg cagatcctgt
     1141 tctagaaggt gaatatccgg ttagagggtt atatcaagca ttggcaatag ctgcaatgtg
     1201 tgtccaagaa caacctaata tgagaccgct cgttgctgac gttgttacgg cgctcaatta
     1261 tctcgcttca caaaattacg atccgttaac taacccggtt cagagttctc gaaggtcttc
     1321 tcgtagacaa agatccagtg gtgagaagaa acccgacgtg taaaggtgat gtcgtagttt
     1381 tgtttttgtg ttcatatatg aaaagggcgt tcggtgtttt tttctggcat cgtaacgagt
     1441 agtaactaca aacttttgac attgtttgtc ttagtttagg ataaaaagat taagagaaat
     1501 aatgaaatta tata
//
LOCUS       XM_071886106            1521 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 14-like (LOC139904173), transcript variant X1, mRNA.
ACCESSION   XM_071886106
VERSION     XM_071886106.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1521
                     /gene="LOC139904173"
                     /note="U-box domain-containing protein 14-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904173"
     CDS             626..1093
                     /gene="LOC139904173"
                     /codon_start=1
                     /product="U-box domain-containing protein 14-like isoform
                     X1"
                     /protein_id="XP_071742207.1"
                     /db_xref="GeneID:139904173"
                     /translation="MQIELVHVQFKRVKGRIDSPDLQLNRDLDMMKKGNEPDLETIKR
                     LSEILCLTTVNDLKREPIAIHDMVIATGGYPEDRFEMMSFLLRKIKDCVMLGSPEVDM
                     NVVETSVITHRSPVIPDNFRCPISFELMKRSCYCINWAGYTWMYHINNFYPNG"
ORIGIN      
        1 ccttccttct tcaagaacca cacccaatcc ttctacatcg gcgattattc accccgactg
       61 ctacaaatca tctcgctgca cacaccattc aacccgttac attttttcaa ccattaaggt
      121 atcaattttg tgaattatct ccgatttcga atagcctgcc tgcttcacaa aattagggtt
      181 tgtacaattg tcgattaaat gaaaaccctc atcgttgtcc ggttcttaag ccagattgag
      241 gaagacgaag ataatcaaat accctaatac agtcaatcta caaaccctta ttttacaatc
      301 aagtttcgtg aagcacctga gatatttaat cgacgattgg agtagagtaa ctcatcgatg
      361 gtttcgtgtt gatttcatct tcatttggga aacttatcat tcatttattt gctcttcaaa
      421 tcgaaaaaac cgcaattaga tttcacgaag taacagctca aagcgaagag acacttagcc
      481 aagttcatta caagagactt ggtttatcag aagaagtgga cgagcaggat tttttatttc
      541 atttaaatag acaattcatt acaactttca atgtttttat ttaattcttt acaactttca
      601 atgtttttta tttaactaac aaaaaatgca gatcgagctt gtgcacgtac aatttaaaag
      661 agtaaaaggg cgaatagatt ctcctgattt acagcttaac agagatttgg atatgatgaa
      721 aaagggaaac gagcctgatc tcgaaacaat caaaagacta tctgaaatat tgtgtcttac
      781 aacggttaat gatttaaaga gggaaccaat tgcaattcat gatatggtaa ttgcgactgg
      841 tggttatcct gaagatcggt ttgagatgat gtcatttctt ttaaggaaaa ttaaagattg
      901 tgtgatgttg gggagccccg aagttgatat gaacgtggtg gaaacgagtg tgattacgca
      961 tcgatcgcct gttattcctg acaattttcg atgcccgata tcttttgaat tgatgaaaag
     1021 atcctgttat tgtatcaact gggcaggtta tacgtggatg tatcatatca acaattttta
     1081 tcccaatgga taattcctct tgagatgagg tggatatttc tctcttttca tttatcaaca
     1141 ttgctaattt tgatcaggtg acaaaggtgg actgttgggc atttgatcag taataaacat
     1201 atagacacca aaactgaaac aaaactcagg ccaaaaaaca caccaaataa tatacctttc
     1261 acgctcactt tcaaaagtca ataaacccaa taacctaaat ggcctattaa gttcattaac
     1321 tgaagaccca ccttttatgc cacacttata aaacgtccca aatccatatt aaccattaag
     1381 agtcaaacac aaactctaac agattataca catcaacaca tccctttatt attgatatac
     1441 cagttcttac acaaaataaa cattcaactt cacctgatct gatctgacca ttactcatct
     1501 taataatcat tcaacttcgt a
//
LOCUS       XM_071886107            1410 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 14-like (LOC139904173), transcript variant X2, mRNA.
ACCESSION   XM_071886107
VERSION     XM_071886107.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1410
                     /gene="LOC139904173"
                     /note="U-box domain-containing protein 14-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904173"
     CDS             626..1075
                     /gene="LOC139904173"
                     /codon_start=1
                     /product="U-box domain-containing protein 14-like isoform
                     X2"
                     /protein_id="XP_071742208.1"
                     /db_xref="GeneID:139904173"
                     /translation="MQIELVHVQFKRVKGRIDSPDLQLNRDLDMMKKGNEPDLETIKR
                     LSEILCLTTVNDLKREPIAIHDMVIATGGYPEDRFEMMSFLLRKIKDCVMLGSPEVDM
                     NVVETSVITHRSPVIPDNFRCPISFELMKRSCYCINWAGDKGGLLGI"
ORIGIN      
        1 ccttccttct tcaagaacca cacccaatcc ttctacatcg gcgattattc accccgactg
       61 ctacaaatca tctcgctgca cacaccattc aacccgttac attttttcaa ccattaaggt
      121 atcaattttg tgaattatct ccgatttcga atagcctgcc tgcttcacaa aattagggtt
      181 tgtacaattg tcgattaaat gaaaaccctc atcgttgtcc ggttcttaag ccagattgag
      241 gaagacgaag ataatcaaat accctaatac agtcaatcta caaaccctta ttttacaatc
      301 aagtttcgtg aagcacctga gatatttaat cgacgattgg agtagagtaa ctcatcgatg
      361 gtttcgtgtt gatttcatct tcatttggga aacttatcat tcatttattt gctcttcaaa
      421 tcgaaaaaac cgcaattaga tttcacgaag taacagctca aagcgaagag acacttagcc
      481 aagttcatta caagagactt ggtttatcag aagaagtgga cgagcaggat tttttatttc
      541 atttaaatag acaattcatt acaactttca atgtttttat ttaattcttt acaactttca
      601 atgtttttta tttaactaac aaaaaatgca gatcgagctt gtgcacgtac aatttaaaag
      661 agtaaaaggg cgaatagatt ctcctgattt acagcttaac agagatttgg atatgatgaa
      721 aaagggaaac gagcctgatc tcgaaacaat caaaagacta tctgaaatat tgtgtcttac
      781 aacggttaat gatttaaaga gggaaccaat tgcaattcat gatatggtaa ttgcgactgg
      841 tggttatcct gaagatcggt ttgagatgat gtcatttctt ttaaggaaaa ttaaagattg
      901 tgtgatgttg gggagccccg aagttgatat gaacgtggtg gaaacgagtg tgattacgca
      961 tcgatcgcct gttattcctg acaattttcg atgcccgata tcttttgaat tgatgaaaag
     1021 atcctgttat tgtatcaact gggcaggtga caaaggtgga ctgttgggca tttgatcagt
     1081 aataaacata tagacaccaa aactgaaaca aaactcaggc caaaaaacac accaaataat
     1141 atacctttca cgctcacttt caaaagtcaa taaacccaat aacctaaatg gcctattaag
     1201 ttcattaact gaagacccac cttttatgcc acacttataa aacgtcccaa atccatatta
     1261 accattaaga gtcaaacaca aactctaaca gattatacac atcaacacat ccctttatta
     1321 ttgatatacc agttcttaca caaaataaac attcaacttc acctgatctg atctgaccat
     1381 tactcatctt aataatcatt caacttcgta
//
LOCUS       XR_011778691            1697 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 14-like (LOC139904173), transcript variant X3, misc_RNA.
ACCESSION   XR_011778691
VERSION     XR_011778691.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1697
                     /gene="LOC139904173"
                     /note="U-box domain-containing protein 14-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904173"
     misc_RNA        1..1697
                     /gene="LOC139904173"
                     /product="U-box domain-containing protein 14-like,
                     transcript variant X3"
                     /db_xref="GeneID:139904173"
ORIGIN      
        1 ccttccttct tcaagaacca cacccaatcc ttctacatcg gcgattattc accccgactg
       61 ctacaaatca tctcgctgca cacaccattc aacccgttac attttttcaa ccattaaggt
      121 atcaattttg tgaattatct ccgatttcga atagcctgcc tgcttcacaa aattagggtt
      181 tgtacaattg tcgattaaat gaaaaccctc atcgttgtcc ggttcttaag ccagattgag
      241 gaagacgaag ataatcaaat accctaatac agtcaatcta caaaccctta ttttacaatc
      301 aagtttcgtg aagcacctga gatatttaat cgacgattgg agtagagtaa ctcatcgatg
      361 gtttcgtgtt gatttcatct tcatttggga aacttatcat tcatttattt gctcttcaaa
      421 tcgaaaaaac cgcaattaga tttcacgaag taacagctca aagcgaagag acacttagcc
      481 aagttcatta caagagactt ggtttatcag aagaagtgga cgagcaggat tttttatttc
      541 atttaaatag acaattcatt acaactttca atgtttttat ttaattcttt acaactttca
      601 atgtttttta tttaactaac aaaaaatgca gatcgagctt gtgcacgtac aatttaaaag
      661 agtaaaaggg cgaatagatt ctcctgattt acagcttaac agagatttgg atatgatgaa
      721 aaagggaaac gagcctgatc tcgaaacaat caaaagacta tctgaaatat tgtgtcttac
      781 aacggttaat gatttaaaga gggaaccaat tgcaattcat gatatggtaa ttgcgactgg
      841 tggttatcct gaagatcggt ttgagatgat gtcatttctt ttaaggaaaa ttaaagattg
      901 tgtgatgttg gggagccccg aagttgatat gaacgtggtg gaaacgagtg tgattacgca
      961 tcgatcgcct gttattcctg acaattttcg atgcccgata tcttttgaat tgatgaaaag
     1021 atcctgttat tgtatcaact gggcagatat cacagctgtt tggttatgaa ttatgagtac
     1081 tagatggaaa tgtcaatggt tcatgctttt ttatttaaag attgatctag aaagcatttg
     1141 cgtgcctaaa aattttaaca gctgatgagt tgcctgttat cctatggaac caggtttttg
     1201 ttatcctctt ttcctgtagc aggttatacg tggatgtatc atatcaacaa tttttatccc
     1261 aatggataat tcctcttgag atgaggtgga tatttctctc ttttcattta tcaacattgc
     1321 taattttgat caggtgacaa aggtggactg ttgggcattt gatcagtaat aaacatatag
     1381 acaccaaaac tgaaacaaaa ctcaggccaa aaaacacacc aaataatata cctttcacgc
     1441 tcactttcaa aagtcaataa acccaataac ctaaatggcc tattaagttc attaactgaa
     1501 gacccacctt ttatgccaca cttataaaac gtcccaaatc catattaacc attaagagtc
     1561 aaacacaaac tctaacagat tatacacatc aacacatccc tttattattg atataccagt
     1621 tcttacacaa aataaacatt caacttcacc tgatctgatc tgaccattac tcatcttaat
     1681 aatcattcaa cttcgta
//
LOCUS       XM_071886108            2142 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides adenylate kinase 5,
            chloroplastic (LOC139904174), mRNA.
ACCESSION   XM_071886108
VERSION     XM_071886108.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2142
                     /gene="LOC139904174"
                     /note="adenylate kinase 5, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139904174"
     CDS             98..1906
                     /gene="LOC139904174"
                     /codon_start=1
                     /product="adenylate kinase 5, chloroplastic"
                     /protein_id="XP_071742209.1"
                     /db_xref="GeneID:139904174"
                     /translation="MLNYTATSSFSSQYHQFTTPHLSSTYTLHPSSSLSVSSSSSSSN
                     SFKNQQNVTSISVYKHTHFRISSRTKGLMVRCSQNEPLKVMISGAPASGKGTQCELIV
                     QKFGLVHISTGDLLRSEVAAGSDIGNQAKEYMNSGRLVPDEVVTTMVIGRLSREDSKE
                     KGWLLDGFPRSFAQAQSLEKMKIKPDVFIALDVPDEILIDRCVGRRLDPETGKIYHVK
                     NFPPENEEVKARLITRPDDTEEKVKSRLQIYKQNVEAILSTYSDLLKKIDGNRSKDVI
                     FDEISSLLLQVQKEKETRISGNASKLASQFNKSPATKESWRGIPTNLNNIPHSREIRE
                     YFYDDVLQATQRAISDGKIRVKVEINIPELNPEQDVYRIGTLMELVRVLALSFADDGK
                     RVKVCVQGSMGEGALAGMPLQLAGTRKILEYMDWGSDGAMGNFINIGAIGGKEVDEVD
                     DIFILVAPQNAMGNCIIDDLRAMTDAAGSRPVILINPRLKDLPASSGIMQTMGREKRL
                     EYAASFEMCYQFRLLYFLGTQYPIMGALRMAYPYRYELFKRINEPSGKEKYVILSTFP
                     SRPTGEEINDAFEGRTRDQVKKSSGFWGFLNGILSA"
     misc_feature    350..1891
                     /gene="LOC139904174"
                     /note="nucleotide kinase; Region: PLN02842"
                     /db_xref="CDD:178435"
ORIGIN      
        1 tttatcctgt taattttctc tatggtttct tctcgatcac agaacaacaa cagcagaaaa
       61 gaaagcttct gctttccata atcaatcaat catcatcatg ttgaattaca ctgcaacttc
      121 ttcattcagt tcacagtatc atcaattcac gacccctcat ctttcttcca cttacactct
      181 ccacccctcc tcatctctct cagtatcatc atcatcatca tcatcaaatt ctttcaaaaa
      241 tcagcagaat gttacttcaa ttagtgttta taagcatacc catttcagaa tatcatcaag
      301 aaccaaggga ctaatggtaa ggtgctcgca aaatgagcca ttgaaagtta tgatatcagg
      361 ggcacctgca tcaggcaaag ggactcagtg tgagttgatt gttcagaagt ttggattggt
      421 gcacatatca actggagatc tgcttagaag tgaagtagca gcaggttctg atattggaaa
      481 tcaagcaaaa gagtacatga attcaggccg acttgttccg gatgaagttg tcacaactat
      541 ggtaattggg cgactttcac gagaagattc aaaagaaaaa ggttggcttt tagatggttt
      601 tccacgcagt tttgctcaag cacaatcact ggagaaaatg aagatcaaac cagatgtgtt
      661 cattgcttta gatgttcctg atgaaattct tatcgataga tgtgtgggta gaaggctaga
      721 ccctgaaaca ggtaagattt accatgtaaa gaacttccct ccagaaaatg aggaagtcaa
      781 agcaagactc ataactcggc ctgatgacac cgaagaaaag gttaaatcac gtctgcaaat
      841 ttataagcag aatgtggaag caatactatc cacatattca gaccttttaa agaagattga
      901 tggcaatcgt tcaaaagatg ttatttttga tgaaataagt tctttgcttt tgcaagttca
      961 gaaagaaaaa gagacaagaa tatcaggaaa tgctagtaaa cttgctagcc agttcaacaa
     1021 atcacccgca accaaggaaa gctggagagg gattccgacc aatttaaata atatccctca
     1081 ttcgagagaa attagggagt atttttatga tgatgttctt caagctaccc aaagagctat
     1141 tagtgatgga aaaattcgag taaaggtgga gatcaatatt cctgaactga accctgagca
     1201 ggatgtatat cgcataggta ctttaatgga acttgttcga gttcttgccc tgtcatttgc
     1261 tgatgatgga aagcgtgtca aggtttgtgt tcaaggatca atgggagaag gagcacttgc
     1321 aggcatgcca ttgcagcttg cagggacacg gaagatttta gaatacatgg actggggtag
     1381 tgatggtgca atggggaatt tcataaacat tggggctata ggtggcaaag aggttgatga
     1441 agtagatgac atcttcatat tagtggctcc tcaaaatgct atgggaaatt gtatcatcga
     1501 tgatctaaga gcgatgaccg atgctgctgg cagtcgtcca gtcatcctta tcaatcctag
     1561 gctcaaggac ttaccagctt caagtggcat catgcaaact atgggtcgag aaaagagact
     1621 ggagtatgct gcatcttttg aaatgtgcta ccagttccgt cttctctatt ttttaggaac
     1681 acaatatcca attatgggtg ctttaaggat ggcttatcca tatcggtatg agttgttcaa
     1741 gaggataaac gagccatctg gaaaggagaa atacgtcatt ttgtcaacat ttcctagtag
     1801 gccaactggt gaagaaatta atgatgcatt tgaaggaaga acaagagatc aagttaagaa
     1861 gtcttctgga ttctggggtt tcttgaacgg catactttca gcatagacac atgttctttg
     1921 aaagagaaca ttcactactc gtgatgaaga acagacaaaa cttatccata ttgtataaaa
     1981 tgtattagat cttgtttgtt gatgtatgat ctccgaggtt tattaacaaa atgacaatct
     2041 tgttcatcca taaagttcta catcacaagc gaaaactata caagatttaa ctgatttaaa
     2101 gatgagtaga tgactatatg caattgacat catcttaatg aa
//
LOCUS       XM_071886109            2275 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transmembrane 9 superfamily
            member 11-like (LOC139904175), mRNA.
ACCESSION   XM_071886109
VERSION     XM_071886109.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2275
                     /gene="LOC139904175"
                     /note="transmembrane 9 superfamily member 11-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139904175"
     CDS             138..2111
                     /gene="LOC139904175"
                     /codon_start=1
                     /product="transmembrane 9 superfamily member 11-like"
                     /protein_id="XP_071742210.1"
                     /db_xref="GeneID:139904175"
                     /translation="MEFFEKIKIWGLLICLISQLGHGYYLPGSYPHKYVVGDPLFVKV
                     NSLTSIDTEIPYSYYSLPFCQPPEGVKDSAENLGELLMGDRIENSPYKFKMHTNETEI
                     FLCQTKPLSIDEFKLLSSRIDEMYQVNVILDNLPAIRYTKRDDFLVRWTGYPLGIKIQ
                     DTYYVFNHLKFTVLVHKYEETNVASVMGTGDAAETIPTVMKPGSDIPGYIVVGFEVTP
                     CSYQHNAESLKNLKMYDKYPSKISCETNTVTMGIKENAPLAFTYEVEFVESDIKWPSR
                     WDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTHYEELDKEAQAQMN
                     EELSGWKLVVSDVFRVPTYPALLCVMVGDGVQILGMAIVTILFAALGFMSPASRGTLL
                     TGMLFFYMILGILAGYVAIRMWRTVFSGDHKGWVSVCWKVACFFPGIAFLILFVLNFL
                     LWGSGSTGAIPFSLFVILILLWFCISVPLTLVGGYFGAKAPHIEYPVRTNQIPREIPA
                     QKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFIVLILLVVVCAEVS
                     LVLTYMHLCVEDYKWWWKSFFASGSVALYIFLYSINYLVFDLKSLSGPVSATLYLGYS
                     LFMVLAIMLATGTVGFLSSFWFVHYLFSSVKLD"
     misc_feature    300..1964
                     /gene="LOC139904175"
                     /note="Endomembrane protein 70; Region: EMP70; pfam02990"
                     /db_xref="CDD:460774"
     polyA_site      2275
                     /gene="LOC139904175"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaaatatca ccgacgaaat tccatttaat cttcttctac aactcttcgc ccatcttttt
       61 catctccaat tcttgcagca tcaacggaac caaatttatt tttcttccat tcatttcatt
      121 acaagatctg accaaaaatg gagttttttg aaaaaatcaa gatctggggt ttgttgatct
      181 gcttgatctc tcaactgggt catggatatt acctccctgg tagttaccca cataaatatg
      241 ttgtaggtga tccattattt gtaaaagtca actctttgac ttcaattgat actgaaatcc
      301 cttatagtta ctacagttta cccttttgtc aaccaccaga aggtgttaaa gatagtgctg
      361 agaatctagg tgagttatta atgggagata gaattgaaaa ctcaccttat aagttcaaaa
      421 tgcatactaa tgaaaccgaa atctttcttt gtcaaactaa accgttatcg atcgatgagt
      481 ttaagttgtt aagtagtagg atagatgaga tgtatcaagt caatgtgatt cttgataatt
      541 tgcccgcgat taggtatact aaaagggatg attttttggt gagatggact gggtatccac
      601 taggaatcaa gattcaagat acgtattacg tgttcaatca tttgaagttt acggttcttg
      661 ttcataagta cgaagaaaca aatgtggcta gtgtaatggg tacaggggat gcagccgaaa
      721 cgatccctac agtcatgaaa ccgggatctg atattcctgg ctatattgtt gttggatttg
      781 aagttacacc gtgtagctac caacacaatg ctgagtcttt gaagaacttg aaaatgtacg
      841 ataaataccc atccaaaatt tcatgcgaaa ccaacactgt gactatgggt atcaaagaaa
      901 acgctccttt ggcttttact tatgaagttg aatttgttga gagcgatatc aaatggccat
      961 cacgatggga cgcgtatttg aaaatggaag gtgcaaaagt acactggttt tcaatcttga
     1021 attcacttat ggttatcact ttcttagctg gaattgtgct cgtgatattc ttgaggaccg
     1081 taaggcgtga tttgactcac tatgaagagt tagacaaaga ggcccaagcc cagatgaacg
     1141 aagaattatc tggatggaaa cttgttgtga gtgacgtttt tcgtgttcct acttatcctg
     1201 cacttttgtg cgtgatggtt ggggacgggg ttcagattct tggaatggcg attgtcacaa
     1261 ttttgtttgc tgctctcggt ttcatgtctc ctgcgtcccg tgggaccctg ttaacgggta
     1321 tgcttttctt ttacatgatt cttggaatct tggctggtta tgttgctatt cgtatgtgga
     1381 gaacggtttt cagtggtgat cataaaggat gggtgtcggt ttgttggaaa gttgcttgct
     1441 ttttcccggg tatcgcattc ttgatccttt ttgtgttaaa tttcctcttg tggggttcag
     1501 gtagcacagg cgctattccc ttttcgttat ttgtcatcct aattttgcta tggttttgca
     1561 tttctgtgcc actaacactc gttgggggtt actttggtgc aaaggcccca catatcgagt
     1621 acccagttag aactaatcaa ataccccgtg aaatcccggc tcaaaagtac ccatcttggc
     1681 ttttggttct tggtgcgggt actcttccat tcgggactct ttttatcgag cttttcttca
     1741 tcatgtctag catatggatg ggccgtgtgt actatgtttt cgggttcttg ttcatagttt
     1801 tgattcttct agtggtcgtt tgtgctgagg tgtcgttggt tttgacctac atgcatcttt
     1861 gtgttgagga ctataagtgg tggtggaagt cattttttgc ttcagggtca gttgcgttgt
     1921 acattttctt gtactcgata aactatcttg tttttgacct taagagcttg agtgggcccg
     1981 tttcagctac actttacttg ggttactcgt tgttcatggt tctagccatt atgctcgcga
     2041 ctgggactgt tgggttcctt tcttctttct ggttcgtgca ctatttgttc tcttcagtta
     2101 aactggatta aaaattgaaa catgttcaga tgaatttgga gggaaatggg aataagtttg
     2161 ttgtattttt gttaaacgta gttacttagt ttgtaatctt gaattgtttg ttagttaatt
     2221 gtatgaattc ttggacactt gtatacggag tatgatttta cagtttttgt attta
//
LOCUS       XM_071886110            1641 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides developmentally-regulated
            G-protein 2 (LOC139904176), mRNA.
ACCESSION   XM_071886110
VERSION     XM_071886110.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1641
                     /gene="LOC139904176"
                     /note="developmentally-regulated G-protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:139904176"
     CDS             163..1362
                     /gene="LOC139904176"
                     /codon_start=1
                     /product="developmentally-regulated G-protein 2"
                     /protein_id="XP_071742211.1"
                     /db_xref="GeneID:139904176"
                     /translation="MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEP
                     PKGSSGAGEGFEVTKYGHGRVALIGFPSVGKSTLLTMLTGTQSEAAAYEFTTLTCIPG
                     IIHYNGTKIQLLDLPGIIEGASEGKGRGRQVIAVSKSSDIVLMVLDASKSEGHRQILT
                     KELEAVGLRLNKKPPQIYFKKKKTGGISFNTTMKLTHLDEKLCYQILHEYKIHNAELL
                     FREDATVDDLIDVIEGNRKYMKCIYVYNKIDVVGIDDVDKLARQPNSIVISCNLKLNL
                     DRLLAKMWEAMGLVRVYTKPQGQQPDFGDPVVLSADRGGCSVEDFCNQIHRSLVKEVK
                     YVLVWGSSARHSPQHCGLTHVLQDEDVVQIVKKKEKESEGRGRFKSHTTGPDRIADRV
                     KKAPLKN"
     misc_feature    163..1266
                     /gene="LOC139904176"
                     /note="Ribosome-interacting GTPase RBG1 [Translation,
                     ribosomal structure and biogenesis]; Region: Rbg1;
                     COG1163"
                     /db_xref="CDD:440777"
ORIGIN      
        1 tttacactct gaaaaggggc tgtagcacca ataccatcgt cgctaattta aactcactca
       61 agctcggtct gcccttcatc gtcgccgttt ccggagatca accgtgcaat ttcaacatca
      121 tctacttctt ctttttgttt acgcgtctta tcataaagaa agatggggat catagaaagg
      181 ataaaagaga ttgaagccga gatggcgcga acccaaaaaa ataaagccac agagtatcat
      241 ttgggtcagc tcaaggctaa gatagcgaag ctaaggacac aactgttaga accacccaaa
      301 ggcagtagtg gagctggaga aggttttgag gttacaaaat atgggcatgg tcgtgttgca
      361 cttataggat ttccaagtgt gggaaaatca acacttttga ccatgctgac gggaactcaa
      421 tctgaggctg cagcatatga gtttacaaca cttacctgta ttcctgggat tattcactac
      481 aatggtacta aaattcaatt gcttgatctt cctggaatca ttgaaggagc ttcagagggc
      541 aaggggcgtg gtaggcaggt gattgcagtt tcgaagtcgt cagatattgt gttgatggtt
      601 cttgatgctt caaaaagtga aggacatcga cagatattga caaaagagct ggaagctgtt
      661 ggcttgcgtt tgaacaagaa accaccacaa atatatttca aaaagaaaaa aactgggggt
      721 atttccttca acaccaccat gaaattgact catttggacg aaaagctttg ctaccaaatt
      781 ttgcacgagt acaagattca caacgcagag ttgttatttc gtgaggatgc cactgtggat
      841 gacctgattg atgttataga gggaaaccga aagtacatga agtgtattta tgtgtacaac
      901 aaaatagacg ttgttggtat cgacgatgtc gataagttag cacggcaacc aaattctata
      961 gtcattagtt gcaacttgaa gctgaatttg gatagactac ttgcaaagat gtgggaagcg
     1021 atggggctag tgagagttta tacaaagcca caagggcaac aacctgattt tggtgaccct
     1081 gtggtccttt ctgctgatag aggtgggtgt tcagtagaag acttctgtaa ccaaatacac
     1141 agaagcctgg tgaaggaagt gaaatatgtg ttggtgtggg gatcaagtgc aaggcattcc
     1201 ccacagcatt gtggcctaac tcatgttctt caggatgagg atgtcgttca gatcgtcaag
     1261 aaaaaggaga aggaaagtga aggaagaggc cggttcaagt cgcatacaac tggtcctgat
     1321 cgtatagctg atagagtaaa gaaggctccc ttgaagaatt agttaaagct ggtcactgcc
     1381 atcaacatct acttggtcac tattttggtt cacggggtta ggaagctacc ggttatctta
     1441 gtatatgcag attataaaaa attgaatttt taagagaatc accatgtaac agatctttag
     1501 tacattcaag cttacatgtt ttgtattatc ttgatcctac ataacccgat gttttacata
     1561 ttgaaccatt gaacctagtg aggctaaaat aatataccat gatgtagaag atgaaacatg
     1621 taatgtgttc gagttacttt t
//
LOCUS       XM_071886111            3383 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 110 kDa U5 small nuclear
            ribonucleoprotein component CLO (LOC139904177), mRNA.
ACCESSION   XM_071886111
VERSION     XM_071886111.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3383
                     /gene="LOC139904177"
                     /note="110 kDa U5 small nuclear ribonucleoprotein
                     component CLO; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139904177"
     CDS             108..3077
                     /gene="LOC139904177"
                     /codon_start=1
                     /product="110 kDa U5 small nuclear ribonucleoprotein
                     component CLO"
                     /protein_id="XP_071742212.1"
                     /db_xref="GeneID:139904177"
                     /translation="MDDSLYDEFGNYIGPEIESDQESDGGEENEDLTLQPHNEMAESD
                     EENGVAGAGQNGWMTTGDVDMDNQIVLAEDKKYYPTAEEVYGEEVETLVMDEDAQPLE
                     LPIIKPVRDIKFEVGVKDSSTYVSTQFLLGLSSNPTLVRNVALVGHLQHGKTVFMDML
                     VEQTHHISTFDQNSEKHMRYTDTRVDEQERRISIKAVPMSLVLEDSNSKSYMCNIMDT
                     PGHVNFSDEMTAALRLADGAVLVVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRL
                     ITELKLPPKDAYHKLRHTIEVINNHITAVSSTAGNVQIIDPAAGNLCFASGCAGWCFT
                     LQSFAKLYVKLHGIPFDANKFASRLWGDNYYDPVSRGFKKKQPSSGAERSFVQFILEP
                     LYKIYSQVIGEHKKSVETTLAELGVTLSNAAYKLNVRPLLRLACSSVFGSATGFTDML
                     VHHIPSAKEAASRKVDHIYTGPKDSSIYQAMEDCDPSGPLMVNITKLYPKSDCSVFDA
                     FGRVYSGELHAGQTVRVLGEGYSPDDEEDMTVKEVTKLWVYQARYRIPINKAPPGSWV
                     LIEGVDASIMKTATLCNSEYNEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLR
                     KISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETV
                     VESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGIVSVDWPRKKLGDFFQTKYDW
                     DLLAARSIWAFGPDKQGPNILLDDTLSSEVDKSLLNAVKDSIVQGFQWGAREGPLCDE
                     PIRNVKFKIVDAKIAAEPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPI
                     DCVSAIYTVLSRRRGHITADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFAL
                     SAFDHWAIVPGDPLDKSIVLRPLEPAPIQYLAREFMVKTRRRKGMSEDVSINKFFDEA
                     MVVELAQQAADLHQQMI"
     misc_feature    117..467
                     /gene="LOC139904177"
                     /note="116 kDa U5 small nuclear ribonucleoprotein
                     component N-terminus; Region: EFTUD2; pfam16004"
                     /db_xref="CDD:464968"
     misc_feature    513..3017
                     /gene="LOC139904177"
                     /note="elongation factor G-like protein; Region: PRK13351;
                     cl46912"
                     /db_xref="CDD:481252"
ORIGIN      
        1 cgaatctgag ccctcatata cactttcaat ctcacacccc ttaaaccctt ctcctcgaaa
       61 ccctttttcc ggccatcaac aggcgatcaa tcctataaat ctgcaggatg gatgacagtt
      121 tatatgatga gtttggaaac tacatcggac cggaaatcga gtctgatcaa gagagtgatg
      181 gaggtgagga gaatgaagat ctcacgttac aaccgcataa tgaaatggct gaatccgatg
      241 aggaaaacgg agttgctggc gctggacaaa acggttggat gacaacaggt gatgtggata
      301 tggataatca gattgttcta gctgaggata agaagtatta tccgactgca gaagaggttt
      361 atggtgaaga agtggaaacg ttagttatgg atgaagatgc acaaccactt gagttaccaa
      421 taatcaagcc ggttagggat attaagtttg aagtaggtgt caaagattca tcgacctatg
      481 tgtctactca gtttctctta ggtttatctt caaatccgac tttggttagg aatgttgctt
      541 tggttgggca cttgcagcat gggaagacgg tttttatgga tatgttggtc gagcaaacgc
      601 atcatatttc gacgtttgat caaaatagtg agaagcatat gagatatacg gatacaaggg
      661 ttgatgagca agaaaggaga atatccatta aggcagttcc gatgtcactt gtacttgaag
      721 atagtaattc aaagtcttat atgtgtaata ttatggatac acccgggcat gtaaattttt
      781 ctgatgaaat gactgctgct ctcagacttg ctgatggggc ggtgttagtt gttgatgctg
      841 ctgaaggagt aatggtgaat acagagaggg cgatccggca tgccattcaa gaacgcttac
      901 ctatagtagt tgtgattaac aaggttgaca gactaataac ggagctcaaa ctaccaccta
      961 aagatgccta tcataaactg agacatacaa ttgaggtcat taacaaccac atcactgcag
     1021 tatcttcaac tgccggaaac gtccaaatta tcgatccagc tgctggaaac ctttgttttg
     1081 ctagtggctg tgcaggatgg tgtttcactc tgcaatcatt tgccaaacta tacgttaagc
     1141 ttcatggaat cccttttgat gccaacaaat ttgcatctcg actttgggga gataactatt
     1201 atgatccagt tagtagaggt tttaagaaga aacaaccttc aagtggggct gaaaggtcat
     1261 ttgtgcagtt cattcttgag cctttatata aaatatacag tcaagttatt ggagaacaca
     1321 aaaagagtgt agagacaact ttggcggaac tcggtgtgac tttgagcaac gccgcctata
     1381 agttgaatgt gaggcccttg ttaagattag cttgcagctc ggtttttggg tcagccactg
     1441 gttttactga tatgctggtt caccatatcc catctgctaa agaagcagcg tctcgaaaag
     1501 ttgatcatat ttacactggt cctaaagatt caagtattta ccaagccatg gaagactgtg
     1561 acccttctgg tccgcttatg gttaatatta ccaagttgta tcccaagtcg gactgtagtg
     1621 tttttgatgc ttttggaagg gtttatagtg gtgaactcca tgccggacag accgttcgtg
     1681 tgcttggaga aggttattca cccgatgatg aggaagatat gactgtaaaa gaagttacca
     1741 agttatgggt ttatcaagct cgatacagga tacctattaa taaggctcct cctggttcat
     1801 gggttcttat tgaaggtgtt gatgcttcaa ttatgaaaac tgctactctt tgtaattcgg
     1861 aatataatga ggatgtttac atctttaggc ctcttcagtt taatactctt ccggtagtga
     1921 aaacggcaac cgagccatta aatcctagcg agttaccgaa aatggttgag ggtcttagaa
     1981 agatcagcaa gagttatcct ctagctatta ctaaagttga ggagtctgga gagcacacta
     2041 tcttaggtac cggagagttg tatctagatt ctataatgaa ggatcttagg gaactatatt
     2101 cagaagttga agtcaaggta gcggacccag ttgtatcatt ttgtgaaaca gtggtggagt
     2161 cttcatcaat gaaatgtttt gctgaaactc ctaacaagaa aaataaaatt accatgattg
     2221 ctgaaccatt ggagagagga cttgcagagg atatcgagaa tggtatcgta agcgtggact
     2281 ggcctagaaa gaagctaggg gacttttttc aaaccaaata tgattgggat ctgcttgctg
     2341 caagatctat atgggcattt ggaccagaca aacagggacc gaatatattg ttggatgaca
     2401 cgctctctag tgaagtagac aagagcctgt tgaatgctgt gaaggattct attgttcaag
     2461 gattccagtg gggtgcacgt gagggtccgc tttgtgatga gcccattcgt aatgttaagt
     2521 ttaaaattgt ggatgcaaaa attgcggctg agccactaca tcgtggaact ggtcaaataa
     2581 tcccaaccgc tcgtcgtgtg gcatattcag cttttctcat ggcaacaccc cggcttatgg
     2641 agcctgttta ctatgtggag atacaaacac caatagattg tgtttctgct atatatacgg
     2701 tgttatcccg aagacgtggg catataactg ctgatgttcc tcaaccagga accccagcct
     2761 acatagtcaa ggcgttccta ccggtaattg aatcgttcgg ttttgagacg gatttacggt
     2821 atcataccca agggcaggca tttgctctgt cagcttttga tcattgggca attgttcctg
     2881 gtgatccgtt agacaaaagc attgtattaa gaccacttga gcctgcacca attcaatacc
     2941 ttgcgcgtga gtttatggtg aaaacaagac gtaggaaggg aatgagcgag gatgttagca
     3001 tcaataagtt ctttgacgag gctatggtgg tggagcttgc ccaacaggct gccgatctgc
     3061 accagcagat gatctaaaag ttagaaactg ttccacaaag atcttgactt aaggtggtgt
     3121 ttatttgtag cttatttgta aacctgtact tacatgatga cactagctac cgaaacaagg
     3181 attgaatttc tattagcagt ttttgttata tttcctatca tatgtccttg agatcagcca
     3241 ttcaacctta ggtatatgtg cactgaagtt ggacacatat agtgatgaat gagacttgta
     3301 gcacatttgt tgttaaatta aatttgcata tgattggtgg tttggccatc cggtttaagt
     3361 tattaatctt atagcaaaag ctt
//
LOCUS       XM_071886112             877 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904178), mRNA.
ACCESSION   XM_071886112
VERSION     XM_071886112.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..877
                     /gene="LOC139904178"
                     /note="uncharacterized LOC139904178; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904178"
     CDS             68..466
                     /gene="LOC139904178"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742213.1"
                     /db_xref="GeneID:139904178"
                     /translation="MKLHLFLTILVLASLLAFKAQGIRLIKTSTLEKSSQDDHLLAKA
                     AEISSGNNRKLMTKVTSSSATTAISKNLKKDGNKNDPKPELKSSDHSNIISSENSKFR
                     KEFMSEQYADVIDIAEMDYTPARKKSPIHN"
     polyA_site      877
                     /gene="LOC139904178"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataacattga ctagcttaag tgtgcaaaaa cttgtagcct ttacaccttc agtttacttc
       61 acaagttatg aagctccatc tctttttaac tattttggtg ttggcaagtc tcctagcttt
      121 taaagctcaa ggtataaggc tcataaaaac cagtacattg gaaaaaagca gtcaagatga
      181 tcatttgcta gctaaggcag ctgaaatttc atcaggaaac aatagaaagc taatgactaa
      241 agttacatct tctagtgcta ccacagccat ttcaaagaac ttgaagaagg atggaaataa
      301 aaatgacccg aaaccagaac tcaaatctag tgatcattcg aatattatct cttcggagaa
      361 ttcaaaattt cggaaggagt tcatgagtga gcagtatgcg gatgttatcg atatagctga
      421 gatggattac actcctgcta ggaaaaagtc accgatacac aactgaactt gaagcatctt
      481 gaggagtatt taatttatat aaagcatttc ataatgaatt tcagaaataa ggcaatggaa
      541 tggtattccg aactacacaa aaaatgcctc aatgctgcaa gatttttagg gttaaggagg
      601 atgattttgt aaatagaact acagttactt agatcgatag tttgttaagt agtaaatgat
      661 gatcattagg ataatccatt gcaaccaagc ttagtttgca gggattttgt aatactacat
      721 gtatactaaa acataagtat aatgatgcta caaatcccaa ttttgttcga atcatgaagt
      781 ttaagtctta gctttagcat gcatagaacc agttatggca tatttttgta atgtatcaaa
      841 gattgaaaat tttcttatgt tgctcttgtt tgatttt
//
LOCUS       XM_071886113            1792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative UPF0481 protein
            At3g02645 (LOC139904179), mRNA.
ACCESSION   XM_071886113
VERSION     XM_071886113.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1792
                     /gene="LOC139904179"
                     /note="putative UPF0481 protein At3g02645; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904179"
     CDS             127..1626
                     /gene="LOC139904179"
                     /codon_start=1
                     /product="putative UPF0481 protein At3g02645"
                     /protein_id="XP_071742214.1"
                     /db_xref="GeneID:139904179"
                     /translation="MASLNPFVAPTSGDQQWVDQIRKTLKTQLSVTVDTPPVSIFTIP
                     QNLKDEKLEAYEPRLIGLGPKHHFRTEVYQKMEQNKLTAVKRILKPIQVPDCEDQVIA
                     KVKDIIPVISACYDSYPQTDDDALSWLLAIDALFLLDQLTVYSDLGYAIDEKDLIMLE
                     NQIPLIVLKEVHKALSSDNSDTEDLWESKFRYFSTKNSPFLLSQQNVDFNRVNHLLDY
                     MYHSIVDNEKSKSIDVNFSQPGSVPDIKPATEELMEAIIKAGSMFPGAKPFIGVLESV
                     EKILYESDEDTKKIQEIRVPSVTELSDIAGVKFVLSPGNEGIRNINFVDQCCYLPVIK
                     LGYDSEVILRNLVAYENLMAQNSFMAGFGLELTEYVDFMCGIIDTASDVKVLREAKII
                     EGDLSDKEIVDMFNGIGRSFGKMSGESELRKTAGELNKVYSNVPSVRFKNEVEKQVRA
                     SAKAITFLVSISGTLVLMREAYSKIGSDPSQMLVQFFSQQLGSFSTLIQ"
     misc_feature    244..1527
                     /gene="LOC139904179"
                     /note="Plant protein of unknown function; Region: DUF247;
                     pfam03140"
                     /db_xref="CDD:460823"
     polyA_site      1792
                     /gene="LOC139904179"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatgaatcat cattgaccaa ccatagccat ttcaagtttt caaccactca aaactttaaa
       61 ccaccaatca ctcaatctac agttaaaaac tcatacccaa tatctgaaaa tcaagtatca
      121 gatcaaatgg catccctaaa cccatttgta gcaccaacat ctggtgatca acaatgggta
      181 gatcaaatca gaaaaacatt aaaaacccaa ctttcagtca ctgtagacac accaccagtt
      241 tccatattca caatccccca aaaccttaaa gatgaaaaac tcgaggcgta cgagcctcga
      301 ctaattgggc tcggtccgaa acaccatttt cggaccgagg tctatcagaa aatggaacaa
      361 aacaagctta ccgcagttaa aagaatacta aaaccaattc aagttcctga ttgcgaagac
      421 caagtcatcg ctaaagtcaa agacatcatc ccggttattt cagcttgtta cgattcgtac
      481 ccacaaacag atgatgacgc gttatcatgg ttactcgcga tcgatgctct gttcttgctg
      541 gatcaactta ctgtttattc agatcttggt tatgctatag atgaaaaaga tctaatcatg
      601 ttagagaacc aaattccgtt aattgtattg aaagaagttc ataaagcttt atctagtgac
      661 aattctgaca cagaagacct ttgggagtcc aaatttcgat atttttcgac taagaattcg
      721 ccgtttctgt tatcgcaaca gaatgttgat tttaatcgag tgaaccacct gcttgattat
      781 atgtaccatt caattgttga caacgaaaag tcaaagtcaa ttgatgttaa ttttagtcaa
      841 cctggaagcg ttccggatat aaaaccagca actgaagaat taatggaagc tattattaaa
      901 gcaggatcaa tgttccctgg tgcgaaaccg tttatcggag tgctcgaaag tgttgagaag
      961 attttatacg aaagtgacga agatacaaag aaaattcaag aaattagggt tccgtcggtg
     1021 acggaactta gcgatatcgc cggagtaaaa ttcgttctgt cgccgggaaa cgaagggatt
     1081 cggaacataa actttgtaga tcaatgttgt tatcttcctg ttattaaact tggttacgat
     1141 tcagaagtta tattaaggaa tttagtagct tatgagaatc tgatggcaca gaatagtttc
     1201 atggccggat ttggtcttga actgacggaa tatgtggatt tcatgtgcgg gattatcgat
     1261 acggctagtg acgtgaaggt gttacgtgaa gcgaagatta tagaaggcga tttgagcgat
     1321 aaggagatcg ttgatatgtt taatgggatc gggagatcgt ttgggaaaat gagtggtgaa
     1381 tcggagttaa ggaagactgc gggtgaattg aacaaggttt atagtaatgt accgagtgtt
     1441 cggtttaaga atgaggttga gaaacaggtt cgggcttcgg ctaaggcgat tacgtttttg
     1501 gttagtattt cgggtacgtt ggtgttgatg cgtgaagcgt attcgaagat tggttcggat
     1561 ccgtcacaga tgttggttca gtttttttcg cagcaacttg gatcattttc tacactcatc
     1621 caatagagat tttaaaaaat gtgtcatttt tcacgtataa tcgatcatcg atttaacttg
     1681 tgtgttaatg tgtatccgtt ggtgtttgtt tttttttttt atagaaaaaa aagataatgt
     1741 gtattcgtta gtgattatgt gtgattatga cacattgagt tttagtggag ta
//
LOCUS       XM_071886114            1902 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative UPF0481 protein
            At3g02645 (LOC139904181), mRNA.
ACCESSION   XM_071886114
VERSION     XM_071886114.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1902
                     /gene="LOC139904181"
                     /note="putative UPF0481 protein At3g02645; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139904181"
     CDS             245..1774
                     /gene="LOC139904181"
                     /codon_start=1
                     /product="putative UPF0481 protein At3g02645"
                     /protein_id="XP_071742215.1"
                     /db_xref="GeneID:139904181"
                     /translation="MAALNPFLSLNSGNKPWVDQISKTLQTQLAVTIDTPPVSIFTIP
                     SNLKEEKPEAYVPQRIGLGPNHHFQPELYQMMEQNKLTSAKRLLKPHKIHDCQREIVA
                     KVKEIDPIIRACYDLYLDADDDMLAWLLAIDGMFLLDQLDSYLNHNFTIEPNELIMLE
                     NQIPCIVLKEIQKSLLGENDQRLGDNLEAKFRCFCKSHSPFLLSKENIEFDHVNHLLD
                     YMYRSIVNNEKWIPIKVDFDNLENDPSEKDAMLELLEAVIKFAMLIPMAQPVIQIIEF
                     VKNTFPIENNTVEEIKVPSVSELTKIAGVKFRLSPVNEGVRNINFVQGTERLCYLPAI
                     NLNTNSEVVLRNLVAYEKLMAKNSFTSVYSLELTEYVDFMCGIIDSAKDVKLLREERI
                     IEGDLSDEEIVKLFNGMGKSRAKVSVETDLRKIVVQLNKVYESTPRIWVRKMVEKQLR
                     AYAKIITFIVSISGSLILIREVYFKFYGLNQPHMIVVRFLRAKLSSLPIMFTHPKGPV
                     V"
     misc_feature    362..1648
                     /gene="LOC139904181"
                     /note="Plant protein of unknown function; Region: DUF247;
                     pfam03140"
                     /db_xref="CDD:460823"
ORIGIN      
        1 aactaataat attttctata atttttaact ttttaacagg ttgactttag tattgatttt
       61 taattttaat tgaattaatt atggtatatc catccaagtg tcattattgt attccataat
      121 ccatccataa taattccatg ataataataa taataataat atttaataac ataataataa
      181 agatttataa gtgttcggta aaaatcactg tagttttggt tgtgcagaat ttggggactt
      241 tcaaatggct gctttaaacc catttttgag tctaaactca ggcaacaaac catgggtgga
      301 tcaaatcagc aaaaccttac aaacacaact tgcagtcact atagacacac caccagtttc
      361 tatattcaca atcccatcaa atctaaaaga agaaaagccc gaagcgtatg tccctcaacg
      421 aatagggctc gggccgaatc atcattttca gcccgaactc tatcagatga tggagcagaa
      481 caagctcaca tcagcgaaaa ggctactaaa acctcacaaa attcatgatt gtcaacggga
      541 aatagtcgca aaagtcaaag aaatcgatcc cataattcgt gcttgttacg atttatatct
      601 tgatgctgat gatgatatgc tggcatggtt acttgcaatt gacggtatgt tcttgcttga
      661 tcaactagat tcttatttaa atcataattt tacaatagag ccaaatgaat tgatcatgtt
      721 agagaaccaa attccatgta ttgtgttaaa ggagatccaa aagtccttat tgggtgaaaa
      781 tgatcaaagg ctaggagata acttggaggc caagtttaga tgtttttgca agtctcactc
      841 accatttcta ttgtctaaag agaatatcga atttgatcat gttaaccact tactcgatta
      901 tatgtaccgt tccatcgtga acaacgaaaa atggatccca ataaaggtcg attttgataa
      961 ccttgaaaac gatccatcag aaaaggacgc aatgttagaa ttactcgaag cggttatcaa
     1021 atttgcaatg ttgatcccaa tggctcaacc tgttattcag atcattgaat ttgtaaagaa
     1081 cacgtttcct atcgagaata atacggttga agagatcaag gtgccatcag tttcagaact
     1141 tactaaaata gcaggagtga agtttcgttt atcgcctgtg aacgaaggtg ttagaaacat
     1201 aaatttcgta caaggaacag aacggttatg ttatctccct gcgattaatc taaacaccaa
     1261 ttcagaggtc gtactaagaa acttggtagc gtacgaaaag ttaatggcaa agaacagttt
     1321 tacaagcgtc tatagtcttg aactaaccga atatgtggat ttcatgtgtg ggatcatcga
     1381 ttctgccaag gacgtaaagc tgttacgtga ggagagaatc atagaaggcg atttgagcga
     1441 tgaggagatc gttaaactgt ttaacgggat ggggaaatcg cgtgcgaaag tgagtgttga
     1501 aacggatttg agaaagattg tggttcaatt gaacaaggtt tatgaaagta caccgagaat
     1561 ttgggttcgc aagatggttg agaaacaact tcgggcttat gccaagatta ttacgttcat
     1621 tgttagcatt tcgggctcgt tgatcttgat tcgtgaggtg tatttcaagt tttatggttt
     1681 gaatcaacca cacatgattg tggttcgttt tcttcgggcc aaattgagta gtttacccat
     1741 aatgttcact catccgaagg gcccggttgt ctaaaatttt tacaatagct gaatttaatt
     1801 atagatgttt atttgttata gatatctata ggcgattaat attgtaattg taaatgtaat
     1861 taagtacagg tgaaaatgat ggtaaaattt tactataatt gc
//
LOCUS       XM_071886115            2016 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904182), mRNA.
ACCESSION   XM_071886115
VERSION     XM_071886115.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2016
                     /gene="LOC139904182"
                     /note="uncharacterized LOC139904182; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139904182"
     CDS             122..1750
                     /gene="LOC139904182"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742216.1"
                     /db_xref="GeneID:139904182"
                     /translation="MAAKLKIAGAWCGVLETDLEQWTVPFLKQEISNRLNCSIDSINL
                     ICSGKVLKDDNGTLKLSELGVKNNSKILVTRVSPDQGKELVAEEEKTIRLQRLKVAAT
                     SLATRHADGSLPDEDFNIELANQSGEKVQLGTEEDQKALMMGLMFHGKAKRLVKNKKY
                     DDALEILTMGEEAFSLCDSSVVQLIDNFPILQIDMVWCYFMLKDISKLSVAGKRLQEA
                     RIGIERSHGKESTRLRLLHGNAHPELALHLRLELLEGIVAYHSGDLEKAKKSLSSARD
                     RYLQLQVPDEALSMLMGMGYKEQSAKRALRMNHQDPERAVNFLIEENAKKQLKIEENI
                     KRKIEIMEQKKFGVTPLKKAVNLLKLKELVSIGFDKELAAESLRRNENETQKALDDLT
                     NPETNSDIQLFIESRKKKRLRQAEDKSIERLASMGFPRETVNAAIRAFGTEELALNHL
                     LEQGAPNGNASATGPLADNIGSSSGGSSRSVANETVPNGGDMSAFADEVKRDVEMEDE
                     LYEELKTEDAFSDYDVELTRESEAIEEYLALVVV"
     misc_feature    <164..349
                     /gene="LOC139904182"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
     misc_feature    <974..1486
                     /gene="LOC139904182"
                     /note="UV excision repair protein Rad23; Region: rad23;
                     TIGR00601"
                     /db_xref="CDD:273167"
     misc_feature    974..1078
                     /gene="LOC139904182"
                     /note="UBA1 domain found in NEDD8 ultimate buster 1 (NUB1)
                     and similar proteins; Region: UBA1_NUB1_like; cd14291"
                     /db_xref="CDD:270477"
ORIGIN      
        1 taaacaaaca acgacaaaac cttttaacaa gaagtttctt ctataatttc atcatctttt
       61 acgaacccca aaacaaaaac gtcgtctatt tttcagtaat cttgatcact caaaacccac
      121 aatggctgca aaattgaaaa tagcaggagc atggtgtggt gttttggaga ctgatttaga
      181 acaatggact gtaccctttt taaaacaaga aatatcaaat cgattaaact gttcaatcga
      241 ttcaattaac cttatttgct caggaaaagt gttgaaagat gataacggaa ccctaaaatt
      301 gagtgagttg ggggtgaaaa ataattcaaa gattttggtc actagggtgt cacctgatca
      361 agggaaggaa ttggttgctg aagaagagaa gactatcagg cttcaaagac tcaaggttgc
      421 tgcaacttca ttggcaacta ggcacgctga tggttcgttg ccggatgaag atttcaacat
      481 tgaattggcg aatcaaagtg gagagaaagt gcagctaggc actgaagaag atcaaaaggc
      541 actgatgatg gggcttatgt ttcatggaaa agcaaaaaga ttggtcaaaa ataaaaagta
      601 tgatgatgcc ttagaaattt tgaccatggg ggaggaggct ttctcgttat gtgattccag
      661 tgtcgttcag ctaattgaca atttcccaat actccaaata gacatggttt ggtgctattt
      721 catgctaaaa gacatcagta agttatcagt tgctggaaaa cgccttcaag aagctcgaat
      781 cggaattgaa agatctcacg ggaaagaatc tacccgactt agacttcttc atggcaatgc
      841 acatcctgaa cttgcactgc acttgaggtt ggagttgcta gaaggtatag tggcatacca
      901 tagtggtgat ctcgaaaagg caaagaaatc gttaagtagt gctagagata gatatttgca
      961 gctccaggtt ccagatgagg cgctatcgat gctaatggga atggggtata aagaacaatc
     1021 tgcgaaaaga gcattacgta tgaaccatca agatcctgag cgggccgtta attttctcat
     1081 tgaggaaaat gctaagaaac agctgaaaat tgaggagaac attaaacgga aaattgagat
     1141 catggagcag aagaagtttg gagttacacc gctcaaaaaa gccgtcaatc ttctcaagtt
     1201 aaaggaattg gtttcaattg gttttgacaa agaactagca gcagagtccc ttcgaagaaa
     1261 cgaaaacgaa acccaaaaag ctcttgatga cctaacgaat ccagagacaa attctgatat
     1321 acagcttttc attgaatcac gaaagaagaa gagattgcgt caagctgaag ataagtctat
     1381 cgagagactc gcatccatgg gtttccccag agaaacagtt aatgctgcta ttcgtgcttt
     1441 tggaaccgaa gaactggcgt taaatcatct gcttgagcag ggtgcaccaa atgggaatgc
     1501 ttcggctaca ggtccactgg cggacaacat tggtagttct agtggcggtt caagtcgtag
     1561 tgtcgcgaat gaaaccgttc cgaacggtgg tgatatgtcg gcttttgctg atgaagtaaa
     1621 gagggatgtg gaaatggaag atgaacttta tgaggaatta aaaactgaag atgcattctc
     1681 tgattatgac gtggaactta caagagaaag tgaagctatt gaagagtact tggcactcgt
     1741 cgtagtctaa ttatcgacca acatcatgca catatacttt tgctgtacag gacgggtttg
     1801 gtggttttag tttcgattga cgttggatga tgaaacttat ttattggatg cttttgtgta
     1861 atttgtgtta ctgttagcta atatattctg ctgcttcggt cttgagtatt attttgtggt
     1921 gcttatgacc tggagactct acttttcata taaacttaaa taataaagtc ataactttgt
     1981 ctttatgtta gggtaactaa gttgtgttta atgaaa
//
LOCUS       XM_071886116             989 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904183), mRNA.
ACCESSION   XM_071886116
VERSION     XM_071886116.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..989
                     /gene="LOC139904183"
                     /note="uncharacterized LOC139904183; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904183"
     CDS             166..669
                     /gene="LOC139904183"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742217.1"
                     /db_xref="GeneID:139904183"
                     /translation="MDAVKSLTSDFGVLQKKAVSLMAFETLIAAHFSLACVFMMTGFL
                     LQDIHTLQSLIGNDRRFPFSELHKKGMTEPEAKDGSDTEDDDEDDVADEPEDDDDAGD
                     EDFSGDEKEEDDDDDAEVPEANGNPGSDDEDEDDDEDDDDDEEEEKEEDEEDYDEDEQ
                     PPAKKRK"
     polyA_site      989
                     /gene="LOC139904183"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaagaatca acctgtcaaa ccctaatccc aaaatccgtc aatttactgt ctttattatc
       61 cttatccgta tcttgaacca tatatctttc aatatcgctc attaaatact gtattttcgg
      121 tgaattgtga agataataat atttggggct tacattcata gttcaatgga cgcagtgaaa
      181 tctttgactt ccgattttgg ggttttgcag aaaaaagcgg tatctttgat ggcttttgaa
      241 accctaattg ctgctcattt ttctcttgct tgcgtcttca tgatgacagg atttcttctt
      301 caggatatac atacactgca aagtttgatt ggaaacgatc gaaggtttcc attttcagag
      361 cttcacaaga agggcatgac tgaacctgaa gcaaaagacg gtagtgacac agaggacgat
      421 gacgaggatg atgtggcaga tgagccggaa gatgatgatg atgctggaga cgaagatttc
      481 tcgggtgacg aaaaggaaga agatgatgac gatgatgctg aagttcccga ggcaaatggc
      541 aatccaggta gcgatgacga ggacgaagat gatgatgagg atgatgatga tgatgaggaa
      601 gaagaaaaag aggaggatga agaagattat gacgaggatg aacaaccgcc agctaagaag
      661 agaaagtaaa agcctaaaag gtattttgtt aaaaaacagg agatctttct tgatgtttta
      721 ttatcatcgg gtatgtagga tagcattttt actttggtca tgtgcgtttt cggttgtagg
      781 attcttaatt atttgcgatg caaatcttag gtgaacttca tgactttttt agtagtttga
      841 tatgcttact gtctattttt tatttttttt ttctcctttt ctttttcagt atgatagtat
      901 cacgatattg gcgacaacgt taagcatttt ttattatgtc atgatatgta aggtaagttt
      961 tatatttagt aaaaagctta aaattttga
//
LOCUS       XR_011778692             498 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904184), ncRNA.
ACCESSION   XR_011778692
VERSION     XR_011778692.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139904184"
                     /note="uncharacterized LOC139904184; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904184"
     ncRNA           1..498
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904184"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904184"
ORIGIN      
        1 cacattcaac aattaatcaa tcgaagaaga ttgaatacga agattctatc tagggtttcg
       61 tgcattaatt gtaaggtcga ctagggctta aaaggttgat tcatatgggt gaattgaagc
      121 tgcatatctt catcgcaatc gtttcctgaa tcacgagtat catacaaacg gtgcgataga
      181 agttgaaatt gtaccaccat aaactgatct gggaggtcat atatgcttaa acataatgca
      241 ccctccactt catcaagtcc acaccttact tcaaccgagg taaccttaaa cgacatggca
      301 aagaggatcc gtgtttgtag gaatccttta tcactttata tttattaaac aatacatgat
      361 agaagcaggt gcccccatct tactatatgg ctaaggagtg agaagaataa taatttaagg
      421 atttagaacc attcaattca atatatattc taattctatt tttgttattt tactcaagtt
      481 tgataaacat accgataa
//
LOCUS       XR_011778693            1374 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904185), transcript variant X1, ncRNA.
ACCESSION   XR_011778693
VERSION     XR_011778693.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1374
                     /gene="LOC139904185"
                     /note="uncharacterized LOC139904185; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904185"
     ncRNA           1..1374
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904185"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904185"
ORIGIN      
        1 ccaaatttct ctccttcaca aacgcgactt tttcatctgt aaaccttttc aatttcttat
       61 tagcaatttc tctatcgatc aaagtgttca tatccaccga atcttaaatc atgtatgtaa
      121 aaattattgt ctgatgtaaa agtttattag tgtttgatgt ttgattttgt gtcgaaatgt
      181 acatataaat gctgtttata attcgacaat ggaaacaatc gaatatcggt cgtgggatct
      241 gactattagg gtttcaaatc gcattagcgt cattatcgtc tccgattact cttcatatca
      301 ggagaaaatt ggttgtggtt ctgcaccttc gtggtacatt acagcttctc aacaacactc
      361 accgtcatcg tatacgatgg gaatgctaac tttatataag gtcaatgtag ccttacatag
      421 atgttaatgt tgaggcaaat gcacaactta agtatatgag aggcaggcta actttaaaaa
      481 agctcaatat aaccattagt tatatgtctc ttaataatgc tgagacaaat gcacaactta
      541 tcacaacccc aataaagaag agtcacggga tgatgaagga aggcgagcat gtagctcttc
      601 tccacagtgg aagacgatcc atttggcagt cccaatcaaa cgataaaata ttcaggtcag
      661 aaatgtataa ataaaagcaa tcaagttact tttgaggcca aacttactga tgctgcaatt
      721 ttgattttaa aatcactatc tgtgtgtttg acttttaagg ttttgatatt tgtgattttc
      781 tgatatataa gccaatgttc ttgaagggat cagtgtttta taaatttata tagctgatgt
      841 agaaactttt tgtgtcaagt ttgttttgtt tgtgtaaagg tagttccagt gagggcataa
      901 catcttatca cacaaacttt actagcactt ggggtttgcg aagaggaaaa agtcaacaat
      961 caggataggt caagcattta tgcatgtaga aatggattaa taccatcttt ttgcctcaga
     1021 tttgtgggat ttcattagaa agcagagcta ctttcatcat gcaaaagcgc tttcgatgtc
     1081 acatgcctcc acctgaagaa agattagcct ataccagaac ataaaatgta acttgttgga
     1141 aaagtgccat atttcaggtt ggcaggtata tgtatgcaat gcagcgcaga cttacaacag
     1201 cctgttctca ctttattgcc gacaccctac tagacgcagc ctcaacgcga acactatcac
     1261 cacttactgc taccgaaccg ccagaaaaca aggcagaatc gttatcaaat gttattcgat
     1321 gtctttataa gttggattat atatgaattt tttatgtttg gtgtttttca tatt
//
LOCUS       XR_011778694            1170 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904185), transcript variant X2, ncRNA.
ACCESSION   XR_011778694
VERSION     XR_011778694.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1170
                     /gene="LOC139904185"
                     /note="uncharacterized LOC139904185; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904185"
     ncRNA           1..1170
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904185"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904185"
ORIGIN      
        1 ccaaatttct ctccttcaca aacgcgactt tttcatctgt aaaccttttc aatttcttat
       61 tagcaatttc tctatcgatc aaagtgttca tatccaccga atcttaaatc atgtatgtaa
      121 aaattattgt ctgatgtaaa agtttattag tgtttgatgt ttgattttgt gtcgaaatgt
      181 acatataaat gctgtttata attcgacaat ggaaacaatc gaatatcggt cgtgggatct
      241 gactattagg gtttcaaatc gcattagcgt cattatcgtc tccgattact cttcatatca
      301 ggagaaaatt ggttgtggtt ctgcaccttc gtggtacatt acagcttctc aacaacactc
      361 accgtcatcg tatacgatgg gaatgctaac tttatataag gtcaatgtag ccttacatag
      421 atgttaatgt tgaggcaaat gcacaactta agtatatgag aggcaggcta actttaaaaa
      481 agctcaatat aaccattagt tatatgtctc ttaataatgc tgagacaaat gcacaactta
      541 tcacaacccc aataaagaag agtcacggga tgatgaagga aggcgagcat gtagctcttc
      601 tccacagtgg aagacgatcc atttggcagt cccaatcaaa cgataaaata ttcagtttgt
      661 tttgtttgtg taaaggtagt tccagtgagg gcataacatc ttatcacaca aactttacta
      721 gcacttgggg tttgcgaaga ggaaaaagtc aacaatcagg ataggtcaag catttatgca
      781 tgtagaaatg gattaatacc atctttttgc ctcagatttg tgggatttca ttagaaagca
      841 gagctacttt catcatgcaa aagcgctttc gatgtcacat gcctccacct gaagaaagat
      901 tagcctatac cagaacataa aatgtaactt gttggaaaag tgccatattt caggttggca
      961 ggtatatgta tgcaatgcag cgcagactta caacagcctg ttctcacttt attgccgaca
     1021 ccctactaga cgcagcctca acgcgaacac tatcaccact tactgctacc gaaccgccag
     1081 aaaacaaggc agaatcgtta tcaaatgtta ttcgatgtct ttataagttg gattatatat
     1141 gaatttttta tgtttggtgt ttttcatatt
//
LOCUS       XR_011778695            1265 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904185), transcript variant X3, ncRNA.
ACCESSION   XR_011778695
VERSION     XR_011778695.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1265
                     /gene="LOC139904185"
                     /note="uncharacterized LOC139904185; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904185"
     ncRNA           1..1265
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904185"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904185"
ORIGIN      
        1 agaagaacca aatttctctc cttcacaaac gcgacttttt catctgtaaa ccttttcaat
       61 ttcttattag caatttctct atcgatcaaa gtgttcatat ccaccgaatc ttaaatcatg
      121 tcgtgggatc tgactattag ggtttcaaat cgcattagcg tcattatcgt ctccgattac
      181 tcttcatatc aggagaaaat tggttgtggt tctgcacctt cgtggtacat tacagcttct
      241 caacaacact caccgtcatc gtatacgatg ggaatgctaa ctttatataa ggtcaatgta
      301 gccttacata gatgttaatg ttgaggcaaa tgcacaactt aagtatatga gaggcaggct
      361 aactttaaaa aagctcaata taaccattag ttatatgtct cttaataatg ctgagacaaa
      421 tgcacaactt atcacaaccc caataaagaa gagtcacggg atgatgaagg aaggcgagca
      481 tgtagctctt ctccacagtg gaagacgatc catttggcag tcccaatcaa acgataaaat
      541 attcaggtca gaaatgtata aataaaagca atcaagttac ttttgaggcc aaacttactg
      601 atgctgcaat tttgatttta aaatcactat ctgtgtgttt gacttttaag gttttgatat
      661 ttgtgatttt ctgatatata agccaatgtt cttgaaggga tcagtgtttt ataaatttat
      721 atagctgatg tagaaacttt ttgtgtcaag tttgttttgt ttgtgtaaag gtagttccag
      781 tgagggcata acatcttatc acacaaactt tactagcact tggggtttgc gaagaggaaa
      841 aagtcaacaa tcaggatagg tcaagcattt atgcatgtag aaatggatta ataccatctt
      901 tttgcctcag atttgtggga tttcattaga aagcagagct actttcatca tgcaaaagcg
      961 ctttcgatgt cacatgcctc cacctgaaga aagattagcc tataccagaa cataaaatgt
     1021 aacttgttgg aaaagtgcca tatttcaggt tggcaggtat atgtatgcaa tgcagcgcag
     1081 acttacaaca gcctgttctc actttattgc cgacacccta ctagacgcag cctcaacgcg
     1141 aacactatca ccacttactg ctaccgaacc gccagaaaac aaggcagaat cgttatcaaa
     1201 tgttattcga tgtctttata agttggatta tatatgaatt ttttatgttt ggtgtttttc
     1261 atatt
//
LOCUS       XR_011778696            2594 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904186), transcript variant X1, misc_RNA.
ACCESSION   XR_011778696
VERSION     XR_011778696.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2594
                     /gene="LOC139904186"
                     /note="uncharacterized LOC139904186; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904186"
     misc_RNA        1..2594
                     /gene="LOC139904186"
                     /product="uncharacterized protein, transcript variant X1"
                     /db_xref="GeneID:139904186"
ORIGIN      
        1 tactaccatt tttcttctct ctcttccaaa tttaaacccc aaaccttttc gccggttgat
       61 tacgccgtac tccggctaat gaaccatcgc catcgacacc actgaatctg taaggatttc
      121 tccaacaaga agatactaag tttatatatt ttggtgacaa acaaccatca catcaaatta
      181 gggtttgagg gtttcaacaa attagggttt gtatgcaaca catcagatga gtcaaaattt
      241 agcgttttca ccgttggtga ttaattccga tttcatgttt tcacgtagtc atataagttg
      301 aaagaaggaa acgaccacga taactgtata cagttttaag ggtttcctga tgcacacgat
      361 ttcaccaccg gatttttctc cgatggagat cgtttttatc attcgtcaat ggaaattggt
      421 ggatttttaa ggcgtataca caaaaaacca tctttattct ccacccacca tcaagttatt
      481 caattgaaac agagtaaaaa ttcttcagtt gaaacagagt aataattcta aatcaggtaa
      541 tacgtgcaat caaaacatgt acccatctac agaggctgtt tacgatctga tgttgtaatc
      601 tccattcggg tgaatcatac gtgaggtatg ggaattgtta atctttggat gtgtggtcca
      661 ttatggatat gtatgttgtg gtcggattgt aaacaagaaa acagtgaaca tatccactta
      721 aggtcatatg ttgtggcaac ggggcacatg tacggttaca ggcatctatg gtagaaatat
      781 gatataatga tgttattata tacatatccg ggggagaatg ggtcaggtga ttctgtacca
      841 aatcgatcaa tgtcctcaga cacaagtagc tacgcatctc tactcacatc aggagactta
      901 taccctgcac cagttggatt actcgggtcg tttgagcaca tatttggcca gattccgcag
      961 cagcagacat catatatggt tatggatcag tatccacttt ctccacgaga cattacactc
     1021 atagtggatc ttttcaaggc gccgcatccc ggttcacctc caccgtcgca tccctatcac
     1081 aacttccgtc atcctttgtc gataagtacg tgtataaggc tttctggtga gcttaacgga
     1141 gagctgcacg agttgttatt cagggtcagt tatcatgatt tttgcttttt gttcaaattc
     1201 ttatcttttc ttcagaggtt tttactgtat gttttctttt tacttatagt ttggaggctc
     1261 ttatatgggc aattatgaat ctttcatttt taataaaaaa attgtttcaa gttatgtaag
     1321 ttagtgaaga tcttatattt attgctatgt tgcttttgat gtcacctgta agatgtttgg
     1381 attcatatca gtccacaaaa cttactatca taggtaaata gctcattgaa agagtattat
     1441 tactataatc aacatttgca gctcgtgtta cacataatag acacatgctg aagaagatat
     1501 cgtgtgtaac aagcatgata tagttcattc atggcagcta ctgcattatg gttgccagac
     1561 aatatgaaaa actaaaagta gcctttcaga aagcttcaaa aggacaaact taacaaaagg
     1621 tcaaaccatg ggatgctgct tatggagtca gctgctgctt taaaagtgaa tttaagcata
     1681 tggagttgtt aagatccagt gaaaatggaa ctagagaaac acacttccat agagttgaaa
     1741 acaactttga cataagcata acaagaaaca gagtcaatca ctaaaatcca acagttacaa
     1801 cttagttttt taatcggact gaagtttttt ttttttttct ttctcttttg tattactact
     1861 atctagattc ctgcctacaa ttcgtgctat tagtctgaat cattttttaa tatcatgggt
     1921 ttctaagatc atttattttt atttttttcg gcgaacaaac gaatactaaa atcatttatt
     1981 atacccgtat gcctttggtc gccacttatg taacaagaac ttaattgcgt catttattta
     2041 catttgtgag cactattagc tggtagaatt tcaggcctct ccgaaccgga tgaacaaggt
     2101 tggttctttt ttttgtttct attattggtt cttaaaaaat tttttattgc atgtataaac
     2161 aagaagacac attaaagaag ttcattatgt tgttcattca tcttcccaat gtaaaaaaaa
     2221 ttgctcagat aggtaccatg acataccgaa gaccagatgc aaagtcagga tgaaacggag
     2281 ttgggtggag ttctatcctt tatgcctttt ctatagctga tggtttggga agaggtaata
     2341 ccctagaccc gacccgaccc gacccaaccc aatcaagtat gtttcacatt aaaagaatgt
     2401 gcatatttgt ttattgatca tgttggtgtt tgcattttga tgcttagttg gctgacacat
     2461 atgtcaaaaa taaagcaata aaaaatcatt ctgtttgaag cagagatata ctgatcattt
     2521 tcatgtaatc aaggaacaag ttgtaacaca tcgccatgca acgaacgtgc tcttaaaggc
     2581 tatatattaa taag
//
LOCUS       XM_071886118            2685 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904186), transcript variant X2, mRNA.
ACCESSION   XM_071886118
VERSION     XM_071886118.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2685
                     /gene="LOC139904186"
                     /note="uncharacterized LOC139904186; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904186"
     CDS             787..1278
                     /gene="LOC139904186"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742219.1"
                     /db_xref="GeneID:139904186"
                     /translation="MMLLYTYPGENGSGDSVPNRSMSSDTSSYASLLTSGDLYPAPVG
                     LLGSFEHIFGQIPQQQTSYMVMDQYPLSPRDITLIVDLFKAPHPGSPPPSHPYHNFRH
                     PLSISTCIRLSGELNGELHELLFRVSYHDFCFLFKFLSFLQRFLLYVFFLLIVWRLLY
                     GQL"
ORIGIN      
        1 tactaccatt tttcttctct ctcttccaaa tttaaacccc aaaccttttc gccggttgat
       61 tacgccgtac tccggctaat gaaccatcgc catcgacacc actgaatctg taaggatttc
      121 tccaacaaga agatactaag tttatatatt ttggtgacaa acaaccatca catcaaatta
      181 gggtttgagg gtttcaacaa attagggttt gtatgcaaca catcagatga gtcaaaattt
      241 agcgttttca ccgttggtga ttaattccga tttcatgttt tcacgtagtc atataagttg
      301 aaagaaggaa acgaccacga taactgtata cagttttaag ggtttcctga tgcacacgat
      361 ttcaccaccg gatttttctc cgatggagat cgtttttatc attcgtcaat ggaaattggt
      421 ggatttttaa ggcgtataca caaaaaacca tctttattct ccacccacca tcaagttatt
      481 caattgaaac agagtaaaaa ttcttcagtt gaaacagagt aataattcta aatcaggtaa
      541 tacgtgcaat caaaacatgt acccatctac agaggctgtt tacgatctga tgttgtaatc
      601 tccattcggg tgaatcatac gtgaggtatg ggaattgtta atctttggat gtgtggtcca
      661 ttatggatat gtatgttgtg gtcggattgt aaacaagaaa acagtgaaca tatccactta
      721 aggtcatatg ttgtggcaac ggggcacatg tacggttaca ggcatctatg gtagaaatat
      781 gatataatga tgttattata tacatatccg ggggagaatg ggtcaggtga ttctgtacca
      841 aatcgatcaa tgtcctcaga cacaagtagc tacgcatctc tactcacatc aggagactta
      901 taccctgcac cagttggatt actcgggtcg tttgagcaca tatttggcca gattccgcag
      961 cagcagacat catatatggt tatggatcag tatccacttt ctccacgaga cattacactc
     1021 atagtggatc ttttcaaggc gccgcatccc ggttcacctc caccgtcgca tccctatcac
     1081 aacttccgtc atcctttgtc gataagtacg tgtataaggc tttctggtga gcttaacgga
     1141 gagctgcacg agttgttatt cagggtcagt tatcatgatt tttgcttttt gttcaaattc
     1201 ttatcttttc ttcagaggtt tttactgtat gttttctttt tacttatagt ttggaggctc
     1261 ttatatgggc aattatgaat ctttcatttt taataaaaaa attgtttcaa gttatgtaag
     1321 ttagtgaaga tcttatattt attgctatgt tgcttttgat gtcacctgta agatgtttgg
     1381 attcatatca gtccacaaaa cttactatca taggtaaata gctcattgaa agagtattat
     1441 tactataatc aacatttgca gctcgtgtta cacataatag acacatgctg aagaagatat
     1501 cgtgtgtaac aagcatgata tagttcattc atggcagcta ctgcattatg gttgccagac
     1561 aatatgaaaa actaaaagta gcctttcaga aagcttcaaa aggacaagta aaactctctt
     1621 tatatccttt gttgcattaa cctttttatc tttatctgtt atagaatgaa ttttgcctac
     1681 aaagttacaa ttgtgtagac ttaacaaaag gtcaaaccat gggatgctgc ttatggagtc
     1741 agctgctgct ttaaaagtga atttaagcat atggagttgt taagatccag tgaaaatgga
     1801 actagagaaa cacacttcca tagagttgaa aacaactttg acataagcat aacaagaaac
     1861 agagtcaatc actaaaatcc aacagttaca acttagtttt ttaatcggac tgaagttttt
     1921 tttttttttc tttctctttt gtattactac tatctagatt cctgcctaca attcgtgcta
     1981 ttagtctgaa tcatttttta atatcatggg tttctaagat catttatttt tatttttttc
     2041 ggcgaacaaa cgaatactaa aatcatttat tatacccgta tgcctttggt cgccacttat
     2101 gtaacaagaa cttaattgcg tcatttattt acatttgtga gcactattag ctggtagaat
     2161 ttcaggcctc tccgaaccgg atgaacaagg ttggttcttt tttttgtttc tattattggt
     2221 tcttaaaaaa ttttttattg catgtataaa caagaagaca cattaaagaa gttcattatg
     2281 ttgttcattc atcttcccaa tgtaaaaaaa attgctcaga taggtaccat gacataccga
     2341 agaccagatg caaagtcagg atgaaacgga gttgggtgga gttctatcct ttatgccttt
     2401 tctatagctg atggtttggg aagaggtaat accctagacc cgacccgacc cgacccaacc
     2461 caatcaagta tgtttcacat taaaagaatg tgcatatttg tttattgatc atgttggtgt
     2521 ttgcattttg atgcttagtt ggctgacaca tatgtcaaaa ataaagcaat aaaaaatcat
     2581 tctgtttgaa gcagagatat actgatcatt ttcatgtaat caaggaacaa gttgtaacac
     2641 atcgccatgc aacgaacgtg ctcttaaagg ctatatatta ataag
//
LOCUS       XR_011778697            2297 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904186), transcript variant X3, misc_RNA.
ACCESSION   XR_011778697
VERSION     XR_011778697.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2297
                     /gene="LOC139904186"
                     /note="uncharacterized LOC139904186; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904186"
     misc_RNA        1..2297
                     /gene="LOC139904186"
                     /product="uncharacterized protein, transcript variant X3"
                     /db_xref="GeneID:139904186"
ORIGIN      
        1 tactaccatt tttcttctct ctcttccaaa tttaaacccc aaaccttttc gccggttgat
       61 tacgccgtac tccggctaat gaaccatcgc catcgacacc actgaatctg taaggatttc
      121 tccaacaaga agatactaag tttatatatt ttggtgacaa acaaccatca catcaaatta
      181 gggtttgagg gtttcaacaa attagggttt gtatgcaaca catcagatga gtcaaaattt
      241 agcgttttca ccgttggtga ttaattccga tttcatgttt tcacgtagtc atataagttg
      301 aaagaaggaa acgaccacga taactgtata cagttttaag ggtttcctga tgcacacgat
      361 ttcaccaccg gatttttctc cgatggagat cgtttttatc attcgtcaat ggaaattggt
      421 ggatttttaa ggcgtataca caaaaaacca tctttattct ccacccacca tcaagttatt
      481 caattgaaac agagtaaaaa ttcttcagtt gaaacagagt aataattcta aatcaggtaa
      541 tacgtgcaat caaaacatgt acccatctac agaggctgtt tacgatctga tgttgtaatc
      601 tccattcggg tgaatcatac gtgaggtatg ggaattgtta atctttggat gtgtggtcca
      661 ttatggatat gtatgttgtg gtcggattgt aaacaagaaa acagtgaaca tatccactta
      721 aggtcatatg ttgtggcaac ggggcacatg tacggttaca ggcatctatg gtagaaatat
      781 gatataatga tgttattata tacatatccg ggggagaatg ggtcaggtga ttctgtacca
      841 aatcgatcaa tgtcctcaga cacaagtagc tacgcatctc tactcacatc aggagactta
      901 taccctgcac cagttggatt actcgggtcg tttgagcaca tatttggcca gattccgcag
      961 cagcagacat catatatggt tatggatcag tatccacttt ctccacgaga cattacactc
     1021 atagtggatc ttttcaaggc gccgcatccc ggttcacctc caccgtcgca tccctatcac
     1081 aacttccgtc atcctttgtc gataagtacg tgtataaggc tttctggtga gcttaacgga
     1141 gagctgcacg agttgttatt caggctcgtg ttacacataa tagacacatg ctgaagaaga
     1201 tatcgtgtgt aacaagcatg atatagttca ttcatggcag ctactgcatt atggttgcca
     1261 gacaatatga aaaactaaaa gtagcctttc agaaagcttc aaaaggacaa acttaacaaa
     1321 aggtcaaacc atgggatgct gcttatggag tcagctgctg ctttaaaagt gaatttaagc
     1381 atatggagtt gttaagatcc agtgaaaatg gaactagaga aacacacttc catagagttg
     1441 aaaacaactt tgacataagc ataacaagaa acagagtcaa tcactaaaat ccaacagtta
     1501 caacttagtt ttttaatcgg actgaagttt tttttttttt tctttctctt ttgtattact
     1561 actatctaga ttcctgccta caattcgtgc tattagtctg aatcattttt taatatcatg
     1621 ggtttctaag atcatttatt tttatttttt tcggcgaaca aacgaatact aaaatcattt
     1681 attatacccg tatgcctttg gtcgccactt atgtaacaag aacttaattg cgtcatttat
     1741 ttacatttgt gagcactatt agctggtaga atttcaggcc tctccgaacc ggatgaacaa
     1801 ggttggttct tttttttgtt tctattattg gttcttaaaa aattttttat tgcatgtata
     1861 aacaagaaga cacattaaag aagttcatta tgttgttcat tcatcttccc aatgtaaaaa
     1921 aaattgctca gataggtacc atgacatacc gaagaccaga tgcaaagtca ggatgaaacg
     1981 gagttgggtg gagttctatc ctttatgcct tttctatagc tgatggtttg ggaagaggta
     2041 ataccctaga cccgacccga cccgacccaa cccaatcaag tatgtttcac attaaaagaa
     2101 tgtgcatatt tgtttattga tcatgttggt gtttgcattt tgatgcttag ttggctgaca
     2161 catatgtcaa aaataaagca ataaaaaatc attctgtttg aagcagagat atactgatca
     2221 ttttcatgta atcaaggaac aagttgtaac acatcgccat gcaacgaacg tgctcttaaa
     2281 ggctatatat taataag
//
LOCUS       XM_071886119            2388 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904186), transcript variant X4, mRNA.
ACCESSION   XM_071886119
VERSION     XM_071886119.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2388
                     /gene="LOC139904186"
                     /note="uncharacterized LOC139904186; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904186"
     CDS             787..1194
                     /gene="LOC139904186"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742220.1"
                     /db_xref="GeneID:139904186"
                     /translation="MMLLYTYPGENGSGDSVPNRSMSSDTSSYASLLTSGDLYPAPVG
                     LLGSFEHIFGQIPQQQTSYMVMDQYPLSPRDITLIVDLFKAPHPGSPPPSHPYHNFRH
                     PLSISTCIRLSGELNGELHELLFRLVLHIIDTC"
ORIGIN      
        1 tactaccatt tttcttctct ctcttccaaa tttaaacccc aaaccttttc gccggttgat
       61 tacgccgtac tccggctaat gaaccatcgc catcgacacc actgaatctg taaggatttc
      121 tccaacaaga agatactaag tttatatatt ttggtgacaa acaaccatca catcaaatta
      181 gggtttgagg gtttcaacaa attagggttt gtatgcaaca catcagatga gtcaaaattt
      241 agcgttttca ccgttggtga ttaattccga tttcatgttt tcacgtagtc atataagttg
      301 aaagaaggaa acgaccacga taactgtata cagttttaag ggtttcctga tgcacacgat
      361 ttcaccaccg gatttttctc cgatggagat cgtttttatc attcgtcaat ggaaattggt
      421 ggatttttaa ggcgtataca caaaaaacca tctttattct ccacccacca tcaagttatt
      481 caattgaaac agagtaaaaa ttcttcagtt gaaacagagt aataattcta aatcaggtaa
      541 tacgtgcaat caaaacatgt acccatctac agaggctgtt tacgatctga tgttgtaatc
      601 tccattcggg tgaatcatac gtgaggtatg ggaattgtta atctttggat gtgtggtcca
      661 ttatggatat gtatgttgtg gtcggattgt aaacaagaaa acagtgaaca tatccactta
      721 aggtcatatg ttgtggcaac ggggcacatg tacggttaca ggcatctatg gtagaaatat
      781 gatataatga tgttattata tacatatccg ggggagaatg ggtcaggtga ttctgtacca
      841 aatcgatcaa tgtcctcaga cacaagtagc tacgcatctc tactcacatc aggagactta
      901 taccctgcac cagttggatt actcgggtcg tttgagcaca tatttggcca gattccgcag
      961 cagcagacat catatatggt tatggatcag tatccacttt ctccacgaga cattacactc
     1021 atagtggatc ttttcaaggc gccgcatccc ggttcacctc caccgtcgca tccctatcac
     1081 aacttccgtc atcctttgtc gataagtacg tgtataaggc tttctggtga gcttaacgga
     1141 gagctgcacg agttgttatt caggctcgtg ttacacataa tagacacatg ctgaagaaga
     1201 tatcgtgtgt aacaagcatg atatagttca ttcatggcag ctactgcatt atggttgcca
     1261 gacaatatga aaaactaaaa gtagcctttc agaaagcttc aaaaggacaa gtaaaactct
     1321 ctttatatcc tttgttgcat taaccttttt atctttatct gttatagaat gaattttgcc
     1381 tacaaagtta caattgtgta gacttaacaa aaggtcaaac catgggatgc tgcttatgga
     1441 gtcagctgct gctttaaaag tgaatttaag catatggagt tgttaagatc cagtgaaaat
     1501 ggaactagag aaacacactt ccatagagtt gaaaacaact ttgacataag cataacaaga
     1561 aacagagtca atcactaaaa tccaacagtt acaacttagt tttttaatcg gactgaagtt
     1621 tttttttttt ttctttctct tttgtattac tactatctag attcctgcct acaattcgtg
     1681 ctattagtct gaatcatttt ttaatatcat gggtttctaa gatcatttat ttttattttt
     1741 ttcggcgaac aaacgaatac taaaatcatt tattataccc gtatgccttt ggtcgccact
     1801 tatgtaacaa gaacttaatt gcgtcattta tttacatttg tgagcactat tagctggtag
     1861 aatttcaggc ctctccgaac cggatgaaca aggttggttc ttttttttgt ttctattatt
     1921 ggttcttaaa aaatttttta ttgcatgtat aaacaagaag acacattaaa gaagttcatt
     1981 atgttgttca ttcatcttcc caatgtaaaa aaaattgctc agataggtac catgacatac
     2041 cgaagaccag atgcaaagtc aggatgaaac ggagttgggt ggagttctat cctttatgcc
     2101 ttttctatag ctgatggttt gggaagaggt aataccctag acccgacccg acccgaccca
     2161 acccaatcaa gtatgtttca cattaaaaga atgtgcatat ttgtttattg atcatgttgg
     2221 tgtttgcatt ttgatgctta gttggctgac acatatgtca aaaataaagc aataaaaaat
     2281 cattctgttt gaagcagaga tatactgatc attttcatgt aatcaaggaa caagttgtaa
     2341 cacatcgcca tgcaacgaac gtgctcttaa aggctatata ttaataag
//
LOCUS       XR_011778698            2623 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904186), transcript variant X5, misc_RNA.
ACCESSION   XR_011778698
VERSION     XR_011778698.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2623
                     /gene="LOC139904186"
                     /note="uncharacterized LOC139904186; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904186"
     misc_RNA        1..2623
                     /gene="LOC139904186"
                     /product="uncharacterized protein, transcript variant X5"
                     /db_xref="GeneID:139904186"
ORIGIN      
        1 tactaccatt tttcttctct ctcttccaaa tttaaacccc aaaccttttc gccggttgat
       61 tacgccgtac tccggctaat gaaccatcgc catcgacacc actgaatctg taaggatttc
      121 tccaacaaga agatactaag tttatatatt ttggtgacaa acaaccatca catcaaatta
      181 gggtttgagg gtttcaacaa attagggttt gtatgcaaca catcagatga gtcaaaattt
      241 agcgttttca ccgttggtga ttaattccga tttcatgttt tcacgtagtc atataagttg
      301 aaagaaggaa acgaccacga taactgtata cagttttaag ggtttcctga tgcacacgat
      361 ttcaccaccg gatttttctc cgatggagat cgtttttatc attcgtcaat ggaaattggt
      421 ggatttttaa ggcgtataca caaaaaacca tctttattct ccacccacca tcaagttatt
      481 caattgaaac agagtaaaaa ttcttcagtt gaaacagagt aataattcta aatcaggtaa
      541 tacgtgcaat caaaacatgt acccatctac agaggctgtt tacgatctga tgttgtaatc
      601 tccattcggg tgaatcatac gtgaggtatg ggaattgtta atctttggat gtgtggtcca
      661 ttatggatat gtatgttgtg gtcggattgt aaacaagaaa acagtgaaca tatccactta
      721 aggtcatatg ttgtggcaac ggggcacatg tacggttaca ggcatctatg gtagaaatat
      781 gatataatga tgttattata tacatatccg ggggagaatg ggtcaggtga ttctgtacca
      841 aatcgatcaa tgtcctcaga cacaagtagc tacgcatctc tactcacatc aggagactta
      901 taccctgcac cagttggatt actcgggtcg tttgagcaca tatttggcca gattccgcag
      961 cagcagacat catatatggt tatggatcag tatccacttt ctccacgaga cattacactc
     1021 atagtggatc ttttcaaggt ttcaaagtta atttgctatg aaattcagcg ccgcatcccg
     1081 gttcacctcc accgtcgcat ccctatcaca acttccgtca tcctttgtcg ataagtacgt
     1141 gtataaggct ttctggtgag cttaacggag agctgcacga gttgttattc agggtcagtt
     1201 atcatgattt ttgctttttg ttcaaattct tatcttttct tcagaggttt ttactgtatg
     1261 ttttcttttt acttatagtt tggaggctct tatatgggca attatgaatc tttcattttt
     1321 aataaaaaaa ttgtttcaag ttatgtaagt tagtgaagat cttatattta ttgctatgtt
     1381 gcttttgatg tcacctgtaa gatgtttgga ttcatatcag tccacaaaac ttactatcat
     1441 aggtaaatag ctcattgaaa gagtattatt actataatca acatttgcag ctcgtgttac
     1501 acataataga cacatgctga agaagatatc gtgtgtaaca agcatgatat agttcattca
     1561 tggcagctac tgcattatgg ttgccagaca atatgaaaaa ctaaaagtag cctttcagaa
     1621 agcttcaaaa ggacaaactt aacaaaaggt caaaccatgg gatgctgctt atggagtcag
     1681 ctgctgcttt aaaagtgaat ttaagcatat ggagttgtta agatccagtg aaaatggaac
     1741 tagagaaaca cacttccata gagttgaaaa caactttgac ataagcataa caagaaacag
     1801 agtcaatcac taaaatccaa cagttacaac ttagtttttt aatcggactg aagttttttt
     1861 tttttttctt tctcttttgt attactacta tctagattcc tgcctacaat tcgtgctatt
     1921 agtctgaatc attttttaat atcatgggtt tctaagatca tttattttta tttttttcgg
     1981 cgaacaaacg aatactaaaa tcatttatta tacccgtatg cctttggtcg ccacttatgt
     2041 aacaagaact taattgcgtc atttatttac atttgtgagc actattagct ggtagaattt
     2101 caggcctctc cgaaccggat gaacaaggtt ggttcttttt tttgtttcta ttattggttc
     2161 ttaaaaaatt ttttattgca tgtataaaca agaagacaca ttaaagaagt tcattatgtt
     2221 gttcattcat cttcccaatg taaaaaaaat tgctcagata ggtaccatga cataccgaag
     2281 accagatgca aagtcaggat gaaacggagt tgggtggagt tctatccttt atgccttttc
     2341 tatagctgat ggtttgggaa gaggtaatac cctagacccg acccgacccg acccaaccca
     2401 atcaagtatg tttcacatta aaagaatgtg catatttgtt tattgatcat gttggtgttt
     2461 gcattttgat gcttagttgg ctgacacata tgtcaaaaat aaagcaataa aaaatcattc
     2521 tgtttgaagc agagatatac tgatcatttt catgtaatca aggaacaagt tgtaacacat
     2581 cgccatgcaa cgaacgtgct cttaaaggct atatattaat aag
//
LOCUS       XR_011778699            1038 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904187), ncRNA.
ACCESSION   XR_011778699
VERSION     XR_011778699.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139904187"
                     /note="uncharacterized LOC139904187; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904187"
     ncRNA           1..1038
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904187"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904187"
ORIGIN      
        1 cacctgattt ttggtcgttc tctcaactgt aaaacgacac cagacttttg cacttatata
       61 acatccatct tcttccaaat aaatcactcc tccaccaacc atcagttcca accaccgcca
      121 acagtagcgg ccgtcaccac cgccgccgcc gccaccgccc ccatctccac ctgaataaca
      181 gccatcgcca ccgcttccat cgctctttgt cttgatttgt taaaatcggg tgattatttg
      241 gagtataaat tagggtttaa tgttggggcg actgttgcat catcgttact gttctgattg
      301 ttatacaata ttttcagaat tttgaagttc aacaactaaa gagagaccgt caacaaatga
      361 ggctgatcat agagcagagc atatcaattg ttcaaagaga tttcttaata agacaactcc
      421 aaaatatata gtcaagtttc atggctaatc gatcaatttt ctctttacct taacggatag
      481 ttccacgtaa gctgataatc gccagttgga tgaagtggat caatgtagag tttttggaat
      541 aatggaaact aagaaaaaat agaggaaaag acagaggaag actacaggtt gtccttttgt
      601 tattagttgt gttcgttttg tgtcatttga tggaacatca gccttggttg tcgacctgtt
      661 ataagctgca ggtattaatt ttataggttt ctaccacatg cagctgcata tgggattcca
      721 gctcatgaca ttgagaatac tgaaaagcta tcgttaaatg acaagggctt gcaactactt
      781 gaattccaat tctaccaggt acatgcttac ggaaactgct caaggcataa ttgttgttat
      841 gacacaaaca accttccata tgtggctcct caaattgttc aggcattgag aaaagaggtc
      901 atgtagtatt ttgaaatttt aagactaatg ttgttactac tccttcagtt tggattttta
      961 catatgttac tcaatataaa acaacatgct aattttagtc gtttaaggta atcaaacgac
     1021 aaaaccttct ttatttgt
//
LOCUS       XM_071886120            1110 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipase A(1) DAD1,
            chloroplastic (LOC139904188), mRNA.
ACCESSION   XM_071886120
VERSION     XM_071886120.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139904188"
                     /note="phospholipase A(1) DAD1, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904188"
     CDS             16..1110
                     /gene="LOC139904188"
                     /codon_start=1
                     /product="phospholipase A(1) DAD1, chloroplastic"
                     /protein_id="XP_071742221.1"
                     /db_xref="GeneID:139904188"
                     /translation="MEYHGSKNWEGLLDPLDEGLRGEIIRYGSFVEAAYQSFDFDPSS
                     STYASCRYTKSTILERSGVDRYRVTKNLFATSSIPLPRWIEKLPRWVQVQSSWIGYVA
                     VCEDKNEISRLGRRDIVIALRGTATCLEWLENLRATLTHCNVDNDNEKIHESMVEAGV
                     LSLYTSGTTKCPSLQQLLQQEILRLLKLYGEEPVSLTFTGHSLGASLAILAAYDIKTI
                     IKHSPHLSVISFGGPRVGNRSFRHQLEKQGTKILRIVNSDDLITKVPGFFVEESNDVV
                     HEHNARVTHITEWIQTNVNDSRWVYANIGHELRLSSRDSLQLNSINIATCHDLKTYLD
                     LVNGFVSSTCPFRAGARKMLNKATTIPSIK"
     misc_feature    16..1083
                     /gene="LOC139904188"
                     /note="phospholipase A1; Region: PLN02408"
                     /db_xref="CDD:215228"
     misc_feature    order(388..393,397..423)
                     /gene="LOC139904188"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     misc_feature    613..627
                     /gene="LOC139904188"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
ORIGIN      
        1 ctaaacgaaa gatggatgga gtaccatggc tcaaaaaact gggaaggctt gttggaccca
       61 cttgatgaag gtctacgtgg cgagatcatt cgctatggta gctttgttga ggcagcttac
      121 caatcgtttg attttgatcc ttcttcctct acttatgctt catgtcgtta cacgaagagt
      181 acaattttag aacggtccgg ggtggataga tatcgagtga caaaaaattt attcgccacg
      241 tcatcaattc cattgccacg ttggatagag aaattgccac gatgggtaca agtgcagtcc
      301 agctggatag ggtacgtggc ggtttgtgag gacaaaaatg aaatctctag gcttgggaga
      361 cgggacatag tcatcgctct tcgtggtacc gccacttgtt tggagtggct cgagaatcta
      421 cgagccactc tcactcattg caatgttgat aacgataatg aaaaaataca tgaatccatg
      481 gttgaagccg gggttttaag cttgtatact tcgggcacaa caaaatgccc gagtttacaa
      541 caattattac aacaagaaat tttaagatta ttaaaattgt acggtgaaga gccagtaagc
      601 ctgaccttca ccgggcattc tcttggagct tctttagcta tattagccgc ttacgatata
      661 aaaacaataa tcaaacactc acctcatctc tctgttatct catttggcgg acctagggtt
      721 ggcaaccgaa gttttcgcca ccaattagaa aaacaaggaa caaaaattct gcgaatagtc
      781 aactcagacg atctaatcac aaaagtacct ggttttttcg ttgaggaaag taatgacgtt
      841 gtacacgagc ataatgcacg tgtgacacat ataactgaat ggatacaaac gaacgttaac
      901 gatagccgtt gggtttatgc taacataggg catgagttac ggttaagtag tcgagactca
      961 ttacaattga acagtattaa catcgcaaca tgtcatgatc taaagactta tcttgacctt
     1021 gtgaatggct ttgtgagttc gacatgtcca tttagggctg gtgcgagaaa aatgctcaac
     1081 aaagctacca ctatcccttc cataaagtaa
//
LOCUS       XM_071886121            1699 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heparanase-like protein 3
            (LOC139904189), mRNA.
ACCESSION   XM_071886121
VERSION     XM_071886121.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1699
                     /gene="LOC139904189"
                     /note="heparanase-like protein 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139904189"
     CDS             1..1641
                     /gene="LOC139904189"
                     /codon_start=1
                     /product="heparanase-like protein 3"
                     /protein_id="XP_071742222.1"
                     /db_xref="GeneID:139904189"
                     /translation="MGSLFLQMGVCIWVVLISLSCNLVDSQIESRHGVLQGSVFIDGK
                     GAIAKIDSNFICATMDWWPPEKCDYGTCSWGNASLLNVDLNNKIFKNAIKAFSTLKIR
                     LGGTLQDKVVYQTENSPKPCTGFSINNTQLFKYTDGCLPLSRWDQLNNFFRETGVEII
                     FGLNALTGRKVVPDHPAVGPWDSANAESLMRYTVKKNYAIYAWELGNELSANGVGTSV
                     TAAQYALDTLTLRNIVQEIYEGIEPKPRIIAPGGFFDPNWFKEFVDKTPETLDIITHH
                     IYNLGPGVDQHLVEKILDPSYLDGEANTFKQLEIILKTSITSASAWVGEAGGAYNSGH
                     NLVTNAFVFSFWYLDQLGMSSVYDTKTYCRQTLIGGNYGLLNTTTFEPNPDYYSALLW
                     HRLMGRKVLSTNFSGTKKIRAYAHCAKESKGIVLLLINLDNKTTVDVSLSLNNTWIVQ
                     NLKSHHHHHHRHKANRPRNSKIGGINTREEYHLTAKNGDLHSQVMLLNGKELAVNSNG
                     EIPPLEPLYADSSEAISVAPFSIVFAHIPHLTLYACSN"
     misc_feature    106..1056
                     /gene="LOC139904189"
                     /note="Glycosyl hydrolase family 79, N-terminal domain;
                     Region: Glyco_hydro_79n; pfam03662"
                     /db_xref="CDD:461010"
ORIGIN      
        1 atgggttctt tatttctgca aatgggtgtt tgtatttggg ttgttttgat tagtttaagt
       61 tgtaatcttg tggattcaca aattgaaagt aggcatggtg ttcttcaagg aagtgttttt
      121 attgatggga aaggtgccat tgcaaagatt gatagtaact ttatatgtgc aacaatggac
      181 tggtggccac ctgagaagtg tgattatggt acttgtagct ggggtaatgc atctctccta
      241 aatgtggacc taaacaacaa aattttcaag aatgccatta aagctttttc tacactaaag
      301 atcagattag gagggacttt gcaagacaaa gttgtttacc aaactgaaaa tagtcccaaa
      361 ccatgcaccg gattctcgat aaacaataca cagttattta agtatactga tggctgccta
      421 cctctatcaa gatgggatca actaaacaac ttctttagag aaacaggggt ggagattatt
      481 ttcggtttga acgcacttac cggtaggaaa gtggtgcctg atcatccagc agttggtcct
      541 tgggattctg caaatgctga atctttgatg cgttacacgg ttaaaaaaaa ttacgccatt
      601 tatgcttggg agcttgggaa tgagttaagt gcaaatggag ttggaacaag cgtaacagca
      661 gctcaatacg ctttagacac attgacctta cgaaacatag ttcaagaaat ctacgagggg
      721 atcgagccta aaccacggat cattgcaccc ggtggtttct ttgatcccaa ctggttcaag
      781 gagtttgtag acaaaacacc tgaaacccta gacattatca ctcatcacat atacaatctt
      841 ggtccagggg ttgatcaaca tcttgttgaa aagatactcg atccatcgta tcttgatggt
      901 gaggctaata cgtttaagca actcgaaatt atcctcaaga cctctataac ttctgcttct
      961 gcttgggttg gtgaagctgg tggtgcttat aatagtggac ataatcttgt caccaatgca
     1021 tttgtcttca gtttctggta cttggatcag ctaggaatgt catctgttta tgacacaaaa
     1081 acatactgcc ggcaaacttt gatcggaggc aactatggtt tactcaatac tacaacattt
     1141 gaacccaatc cagattacta cagcgctctt ctgtggcatc ggttgatggg tagaaaggtt
     1201 ctttctacaa atttcagtgg aacgaagaaa attcgagctt atgcacattg tgccaaagaa
     1261 tctaagggaa tagtgctact acttatcaat ctagataaca aaactacggt tgatgtaagc
     1321 ttatctctaa ataatacttg gattgtgcaa aatctcaaat ctcatcatca tcatcatcat
     1381 cggcataaag caaacaggcc acgtaattcc aaaatcggtg gaataaacac aagagaagaa
     1441 taccatttaa cggccaaaaa cggagattta catagtcaag tgatgctgct aaatggtaaa
     1501 gagttggctg taaattcaaa tggggaaata ccaccattgg agcctttgta tgcagattct
     1561 tcggaggcca taagtgttgc tcctttttct attgtgtttg ctcatatacc acatcttact
     1621 ttgtatgctt gcagcaatta aataacaaca tatacataca tgaaatggaa ctgagaatca
     1681 gttccatttt ggttattga
//
LOCUS       XM_071886122            1854 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable anion transporter
            6, chloroplastic (LOC139904191), mRNA.
ACCESSION   XM_071886122
VERSION     XM_071886122.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1854
                     /gene="LOC139904191"
                     /note="probable anion transporter 6, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139904191"
     CDS             72..1655
                     /gene="LOC139904191"
                     /codon_start=1
                     /product="probable anion transporter 6, chloroplastic"
                     /protein_id="XP_071742223.1"
                     /db_xref="GeneID:139904191"
                     /translation="MAKLYTFRTDTSLSCLSQHKFRYSPNNRFLKPSLSSPSLLNHQS
                     GFSKVSCSIKEKENIKENDKFSSIVTGLRVDDELGENPEDGIGKLGFQNLNWPPWKNV
                     PQRYKLIGTTSLAFVICNMDKVNLSIAIIPMSHEFGWSSSVAGLVQSSFFWGYAMSQL
                     PGGWLSKIFGGRVILQFGVLAWSLATALVPLVAGYMPGLVFTRILVGIGEGVSPSAAT
                     DLIARLIPLEERSRAVSFVFGGLSVGSVLGLLLAPPLIESFGWESVFYMFGLFGIVWF
                     LGFQFVAEDQPSTNFSSLSRSQPSHKSKSWETSLEEFGGSLNVPWKSFFQSKAVWAMI
                     YAHFCGSWGHYCCLSWLPTYFSEELDLNLTEAAWVSVLPPLASVVVTSFASQFADKLI
                     SNGVETTVVRKICQTIAFLSPAACMILSSVDLGLPPWEVVTILTSGLALSSFALSGLY
                     CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWGLSLFAPSIFFYLTG
                     TVIWLAFASSEPQSFKKID"
     misc_feature    396..1619
                     /gene="LOC139904191"
                     /note="Solute carrier family 17 member 9 and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; Region: MFS_SLC17A9_like; cd17380"
                     /db_xref="CDD:340938"
     misc_feature    order(426..431,438..443,450..452,546..548,699..704,
                     708..716,723..725,783..785,792..797,804..806,1080..1082,
                     1089..1094,1101..1109,1116..1118,1200..1202,1212..1214,
                     1389..1394,1404..1406,1416..1418,1464..1466,1473..1478,
                     1485..1490,1497..1499)
                     /gene="LOC139904191"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340938"
ORIGIN      
        1 aacacaatac gcaaccctca aattaattac agtactaaac tctccaaatt tcacatttta
       61 cttcaaaaag aatggcgaag ttgtatacat ttagaacaga tacaagttta tcttgtctgt
      121 cacagcataa atttcgctat tcgcccaaca atcggttctt gaaaccatca ttatcgtcac
      181 catctttact aaatcatcaa agtgggtttt cgaaggtttc ttgttctatc aaagaaaaag
      241 aaaatatcaa ggaaaatgat aaattttcat caattgttac tgggttaaga gttgatgatg
      301 aattgggtga aaaccctgaa gatggaattg ggaaattagg gtttcaaaat ctgaattggc
      361 ctccttggaa aaatgttcct caaagatata aacttattgg cactacctca cttgcttttg
      421 ttatatgtaa catggataag gtgaatttga gtattgctat tataccaatg tcacatgagt
      481 ttggatggag ttcatcagta gcaggattag tacaatcatc attcttttgg gggtatgcca
      541 tgagtcagtt gccaggtggt tggctttcta aaatctttgg tgggagggta atacttcagt
      601 ttggtgttct tgcatggtca cttgctacag cacttgtgcc tcttgttgct ggctatatgc
      661 ctggacttgt ttttacaagg attcttgttg gaataggtga aggtgtatca ccttcagctg
      721 ccacagatct gattgccaga ttaattccat tggaagagcg gtcacgggct gtatcatttg
      781 tatttggtgg tctaagtgtt ggaagtgtct tggggcttct tttggctcct cccctgattg
      841 aatcttttgg gtgggaatct gtattctaca tgtttggatt gtttggaatt gtgtggtttt
      901 tgggatttca gtttgttgca gaagaccaac cttccaccaa cttttcatct ttatcaaggt
      961 ctcagccaag tcataagtcg aagtcatggg aaacttcttt agaagaattt ggtggctccc
     1021 taaacgtacc atggaagtcg tttttccaaa gtaaagctgt atgggcgatg atatatgctc
     1081 atttttgtgg aagttggggc cactattgct gtttatcttg gcttcctact tattttagtg
     1141 aggaacttga cttaaatctt acagaagctg catgggtttc cgttcttcct ccactagctt
     1201 cggttgttgt aactagcttc gcatcacagt ttgcagacaa gttaatctct aatggagttg
     1261 aaacaacagt ggtgcgcaaa atctgccaaa caattgcgtt tttgtctcct gcagcgtgta
     1321 tgattctatc atctgtcgac ttgggtttgc ccccatggga agtcgttact atccttacca
     1381 gtggtttagc tctatcaagc tttgcattat ctggactata ttgtacacat caagatatat
     1441 cacccgaata tgcaagcata cttttgggca ttactaatac tgtgggggca gttcctggaa
     1501 tcgtaggtgt tgctctcacc ggatatcttc ttgattcaac acattcatgg ggtttgtcgc
     1561 tctttgcacc atcgatattc ttctacctca ctggtacagt catatggtta gcatttgcaa
     1621 gcagtgaacc tcaaagtttc aagaagatag attaaagaag gatcggactt ttttaactac
     1681 cgctgacttg gatcccttca acaattttga atagaaggtg actaactttt gctaaccaaa
     1741 actgttgtat ttatgcaaat tcatagctat ataaacattt catgactcta gattatgtat
     1801 gaatcttgta tatttttcag atcgaagaga tttagttata gaagttcata ttta
//
LOCUS       XM_071886123             685 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 21 kDa protein-like
            (LOC139904193), mRNA.
ACCESSION   XM_071886123
VERSION     XM_071886123.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..685
                     /gene="LOC139904193"
                     /note="21 kDa protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904193"
     CDS             32..622
                     /gene="LOC139904193"
                     /codon_start=1
                     /product="21 kDa protein-like"
                     /protein_id="XP_071742224.1"
                     /db_xref="GeneID:139904193"
                     /translation="METSYSIKFLSNNIILIALVLTSSITYISALEKTSVEFIKTSCS
                     LTTYPTLCFNSLSTKAGAIQTSPKLLAQTALSVSLETTLTTSSSMVTLSQVHGITQRE
                     VAAMRDCLEVLSDSAYELKKSLDEMKHPGSKDRGLVMSDVQTWVSSSLTDEDTCSEGF
                     RNDPKMKNVVKGKIVNVVHLISNALALINSYASIRD"
     misc_feature    152..610
                     /gene="LOC139904193"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; Region: PMEI-like_3;
                     cd15798"
                     /db_xref="CDD:275442"
     misc_feature    order(362..367,374..376,386..388,458..460,494..496,
                     596..598)
                     /gene="LOC139904193"
                     /note="putative heterodimer interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:275442"
ORIGIN      
        1 cttaaaacac tatccaacag ataaacaagc aatggaaacc tcatactcca tcaaatttct
       61 atcaaataat attatcctaa tagcacttgt actcacgtcc tctattactt atatctcggc
      121 tctcgagaaa acgagtgtcg agttcatcaa aacatcatgc agtttaacaa cttatcctac
      181 actctgtttc aactccctgt caactaaagc aggtgcaatc caaacaagcc ctaaattact
      241 agcccaaaca gctttatctg ttagtcttga aacaacacta accacctcat catcaatggt
      301 aacattatca caagtgcacg gtataactca acgagaggtt gcagccatga gagactgtct
      361 tgaagtactg agtgactcag cgtacgagtt aaaaaaatca cttgacgaga tgaaacaccc
      421 gggttcaaaa gatcgggggc tagttatgag tgatgtacaa acttgggtca gttcatcgtt
      481 gacggatgaa gacacgtgtt ccgaagggtt taggaatgac ccgaaaatga aaaatgtggt
      541 gaaagggaag attgtgaatg ttgttcattt gattagtaac gctttggctt tgatcaacag
      601 ttatgcttct atacgcgatt agtgtattca ttatgttata atttaactta ttttaattcc
      661 ttttgtaaca acgtatgaat gtaaa
//
LOCUS       XM_071886125             868 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bifunctional purple acid
            phosphatase 26-like (LOC139904194), mRNA.
ACCESSION   XM_071886125
VERSION     XM_071886125.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..868
                     /gene="LOC139904194"
                     /note="bifunctional purple acid phosphatase 26-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139904194"
     CDS             211..648
                     /gene="LOC139904194"
                     /codon_start=1
                     /product="bifunctional purple acid phosphatase 26-like"
                     /protein_id="XP_071742226.1"
                     /db_xref="GeneID:139904194"
                     /translation="MHSPMYNTNSAHYMEGESMRVVFEKWFVENKVDVVFAGHVHAYE
                     RSYRISNIQYNISNGLSYPIADESAPVYINIGDGGNLEGLASSYNDPQPDYSAFREAS
                     YGHATLEIMNKTHAIYTWNRNDEGMSFVADSLVLENLYWKGMN"
     misc_feature    <211..624
                     /gene="LOC139904194"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; Region: MPP_superfamily; cl13995"
                     /db_xref="CDD:472684"
ORIGIN      
        1 actttcaaac agtatcttta tagataccag acgccttata aagctagtgg aagcagtagt
       61 cctctttggt acgctgtgag acgtgcatcc gctcatataa tctttctatc tagttattct
      121 ccatttgtaa aatacacacc tcaatatgag tggctccaag cagaatttaa aaaagtggac
      181 agaacaaaaa ccccctggct ctttgttatt atgcactccc ctatgtataa cactaatagt
      241 gctcactaca tggaaggtga aagcatgcga gttgtattcg agaaatggtt tgttgagaac
      301 aaagtcgacg tagtttttgc aggacatgtc catgcttacg aacgatcgta tcgcatctcg
      361 aacattcaat acaacataag caatggtctg agttacccta ttgcagacga atcagctcca
      421 gtttacataa acattggaga tgggggaaac ctagaaggtc ttgcatcaag ttataatgat
      481 cctcaacctg attactctgc attccgggaa gctagttatg gacatgctac actagagatc
      541 atgaataaaa cgcacgctat ttacacctgg aatcgcaatg atgaagggat gagttttgta
      601 gccgattccc tagtattgga aaatttgtat tggaaaggga tgaattgaac ccgacttgga
      661 tttgagacaa ataaggatcc gagtgtatcc agatgttttt aattgtgtgt accatttcta
      721 cgctgctaat attcactact catttaaatg tttacttccc attttggagg cctgctattg
      781 ctatggcagt agtcagaata tcaatactcc taaatatcct gtccatattt ggtttttgtt
      841 tcagcttaat ttaatgatct ggttctca
//
LOCUS       XM_071886126            3470 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-transporting ATPase
            4, endoplasmic reticulum-type-like (LOC139904195), mRNA.
ACCESSION   XM_071886126
VERSION     XM_071886126.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3470
                     /gene="LOC139904195"
                     /note="calcium-transporting ATPase 4, endoplasmic
                     reticulum-type-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 28 Proteins"
                     /db_xref="GeneID:139904195"
     CDS             4..3189
                     /gene="LOC139904195"
                     /codon_start=1
                     /product="calcium-transporting ATPase 4, endoplasmic
                     reticulum-type-like"
                     /protein_id="XP_071742227.1"
                     /db_xref="GeneID:139904195"
                     /translation="MGKGGEDYGKKENSSKSSIDSNGYAAWAKDVRECEQNYHVDSKS
                     GLTDDEAEKRLQKYGTNELEKHEGQSILRLVLDQFNDTLVRILLAAAVISFVLAWYDG
                     DEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEQATVIRNGKK
                     INSLPAKELVPGDIVELRVGDKIPADMRVITLVSSTLRVEQGSLTGESEAVSKTTKPV
                     PEETDIQGKKCMVFAGTTVVNGNCLCMVTDTGMNTEIGKVHSQIHEASQNEEDTPLKK
                     KLNEFGEVLTMLIGLICLLVWLINVKYFLSWEYVDGWPSNFKFSFEKCTYYFEIAVAL
                     AVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQ
                     MAVAKLVAMGQGPSFLRSFNVEGTTYNPLDGKILEWPAGKMDANLQTIAKIAALANDA
                     GIERSDKGYVATGMPTEAALKVLVEKMGLPTEFGSGSSKGDDDLMVCSQQWSKVESRI
                     ATLEFDRDRKSMGVIVTSKSGRNSLLVKGAVENLLERSSYIQLLDGSVVELDSRAKSS
                     ILDSLNELSSSALRVLGFAYKEDPPEFTTYNGDEDHPAHELLLNPANYSKIESNLIFA
                     GLAGLRDPPRKEVPQAIEDCRIAGIQVIVITGDNKNTAEAICREIGVFGQHEDISKRS
                     LTGREFMDLDDQKGHLSYKGGLLFSRAEPRHKQEIVRLLKEAGEVVAMTGDGVNDAPA
                     LKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISS
                     NIGEVASIFLTAAIGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKYIMKKAPRRSD
                     DSLISAWILFRYLVIGLYVGVATVGVFIIWYTHDSFLGIDLGQDGHTLVTYSQLSNWG
                     QCKTWENFTVSPFIAGDRQFNFDSNPCDYFQGGKVKAMTLSLSVLVAIEMFNSLNALS
                     EDESLLTMPPWVNPFLLMAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLAVAL
                     PVILIDEILKFVGRLTQGSQMSPRTSKRKTE"
     misc_feature    82..3135
                     /gene="LOC139904195"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; Region: Haloacid Dehalogenase-like Hydrolases;
                     cl21460"
                     /db_xref="CDD:473868"
     misc_feature    order(1150..1164,1966..1971,2143..2145,2197..2202,
                     2209..2214)
                     /gene="LOC139904195"
                     /note="active site"
                     /db_xref="CDD:319763"
     polyA_site      3470
                     /gene="LOC139904195"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttaatgggaa aaggagggga ggactatggt aagaaagaga atagtagcaa atcatctatt
       61 gattcgaacg gatatgcggc gtgggcgaag gatgtgcggg aatgcgaaca aaattaccat
      121 gtggatagta agtctggtct aactgatgat gaggctgaga agcggttgca aaagtatggg
      181 acgaatgaat tggaaaaaca tgaagggcag tctattttac gtttagtttt agatcagttt
      241 aatgatacgc tagttaggat tttgcttgct gcggctgtga tctcgtttgt tttggcgtgg
      301 tatgatggtg acgaaggtgg ggagatggag atcacagcgt ttgttgagcc gttggtcatt
      361 tttcttatat taattgttaa tgctattgtt ggtgtttggc aagaaagtaa cgcagagaag
      421 gctttagaag cacttaaaga aattcagtct gaacaagcga ctgtgatacg taatggcaag
      481 aagattaata gtcttcctgc gaaggaactt gttcctggtg atatcgttga gcttcgggtg
      541 ggagataaaa tcccggctga tatgagggtc ataactttag tgagttcgac tcttagggtt
      601 gagcaaggtt ctttgactgg agaaagtgaa gccgttagta aaactactaa acctgtcccc
      661 gaggagacag atattcaagg gaaaaagtgt atggtgttcg ctgggacaac tgttgtgaat
      721 gggaactgtt tgtgtatggt tacagataca gggatgaata ctgaaatcgg aaaggtgcat
      781 tcacagattc atgaggcatc tcagaatgaa gaagatactc ctttgaagaa gaaactgaac
      841 gagtttggag aagttttgac tatgctaatt gggttaattt gtcttctcgt ttggctaatt
      901 aacgtgaagt actttttgtc atgggagtat gttgatggtt ggccgagcaa cttcaagttc
      961 tcattcgaga agtgcactta ttacttcgaa atcgcagtag cattagctgt tgctgctatt
     1021 ccagaaggtc tgccagctgt gattaccact tgtttggccc ttggcacacg taagatggct
     1081 cagaagaatg ctcttgttag gaaattacct agtgttgaga ctcttgggtg tacaacagtg
     1141 atttgttctg acaaaaccgg tacgttgacc actaatcaga tggctgtggc taagctcgtt
     1201 gctatgggtc agggaccgag ttttctccga tcttttaacg tcgaagggac cacatataac
     1261 ccgttggatg ggaaaatact tgaatggcca gctggtaaaa tggatgctaa ccttcagacg
     1321 attgcaaaga ttgctgcttt ggctaacgat gctggcattg aacgatccga taaaggttat
     1381 gttgccactg gcatgccgac tgaagcagca ttgaaggttc tcgttgagaa aatgggtctt
     1441 cctactgaat tcggttctgg ttcatctaaa ggagacgatg accttatggt ttgttctcag
     1501 cagtggagta aagttgaaag cagaattgcc accctcgagt ttgaccgtga taggaaatct
     1561 atgggggtca tcgttacttc caaatctggg agaaactcat tacttgtaaa gggtgctgtt
     1621 gaaaatttgc ttgaaaggag ttcttacatc cagttgcttg atggttctgt tgtggaactg
     1681 gacagcaggg ccaaatcatc cattttagat agccttaacg agctttcatc ctctgcatta
     1741 cgtgttttgg gttttgcata caaggaggat cctccagagt ttacgactta caatggcgat
     1801 gaagaccatc ctgctcatga acttctactg aatccagcta attactccaa aattgaaagt
     1861 aatttgatct ttgctggctt agctggactc agggatcctc ctcgtaaaga agttcctcaa
     1921 gcgattgaag actgcagaat agctggaatt caagttattg tgataacagg agataacaag
     1981 aacacagcag aagcaatttg tcgtgagatt ggtgtatttg gacaacatga ggacatcagt
     2041 aaaaggagct taacaggaag agaatttatg gatcttgatg atcaaaaggg tcacttatca
     2101 tacaaaggag gacttctatt ttctagggct gaaccacgtc acaagcaaga gatagtgagg
     2161 ctgctcaaag aagcaggtga ggtggttgcc atgactgggg atggagttaa tgatgcacct
     2221 gctttgaaat tggctgatat cggaattgca atgggtatta ctggaactga ggttgcaaag
     2281 gaagcttctg acatggtatt ggcagatgat aattttagca caattgtggc tgctgtcgga
     2341 gaaggcaggt ctatttacaa caatatgaag gcctttattc gatatatgat atcttcgaat
     2401 attggtgagg ttgcttccat attcttgact gctgctattg gtattccaga aggtctgatt
     2461 cctgttcagc ttttatgggt caatcttgtc actgatgggc cccctgcaac agccttggga
     2521 tttaatccac ctgacaagta catcatgaaa aaggctcccc gcaggagtga tgattcatta
     2581 atcagtgcct ggatcttatt tcgctatctg gtaattggac tttacgtagg cgtagcgact
     2641 gtgggtgttt tcatcatatg gtacactcat gactcatttt tgggtattga cttgggtcaa
     2701 gatggtcaca ccttagtcac ttactcgcag ctttcaaact ggggtcaatg taaaacatgg
     2761 gaaaatttca ccgtctcacc tttcatagcc ggcgaccgtc aattcaattt cgactctaac
     2821 ccatgtgact atttccaagg tggtaaagtc aaagcaatga cactctctct atccgtattg
     2881 gtcgcaattg agatgtttaa ttccctcaac gcattatcag aagacgagag ccttttgacc
     2941 atgccaccat gggtcaaccc gtttttactt atggcaatgt cagtctcgtt tgggcttcat
     3001 ttcttgatcc tgtacgttcc gttccttgca caagtatttg ggatcgttcc tttaagctta
     3061 aacgagtggt tgttggtttt ggcggttgct ttacctgtca tattgattga tgagattctt
     3121 aaattcgttg gtcggttgac tcaaggaagt caaatgagcc caaggacctc aaagcggaaa
     3181 acagagtgat tgtaacttgg ataacagtgg ctatatcaga aaagacttat aaatttgttg
     3241 actgacattt tattgcttgt ggtccggcct tgttaaaaga ccgtaattgt tcttgaaagc
     3301 gagtaggtcg gatcatggac aaatttgttt agtaatagtt ttggtagaag ttagtatgat
     3361 attttttttc tttactttca taatgtattg ggacttcggc aaactgatat tcgatggaac
     3421 cagaacccga acaatttgaa taattcacag ttctatgttt ttgctgtgca
//
LOCUS       XM_071886127            1410 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904196), mRNA.
ACCESSION   XM_071886127
VERSION     XM_071886127.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1410
                     /gene="LOC139904196"
                     /note="uncharacterized LOC139904196; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904196"
     CDS             42..1205
                     /gene="LOC139904196"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742228.1"
                     /db_xref="GeneID:139904196"
                     /translation="MSCFSIPDPLYSDNDDDTPPPSPTATTGKPDFSVFKQTIGRQFK
                     NVATFLAPPPQQSSSSSPPQTLSHDSGELTGEASPSSIEGVKNDLAEIGASFKTGLSL
                     LSPKKAVTQFSKLASNLLQSDKGDNDVFEKVSGVTEDLVLFVGMLSNRPNLWIDFPLS
                     LSGKEFSMSSIQKDHTVAIEQLVPSITTLRHTVQNYMSEQQFWMTYFVLMFPRFNEDD
                     YYKHLLTSEIVLVYDEVMEKLRNRKNTFQETDALCETSNAPPYRRKNRNQEDDISVCD
                     LDNETSSGVRQTQSSKLSSANEFSDWVRLSDASKANRSTYHEGRSYKSDSSVDGGNQS
                     NKNQEEDVSSASETSDWVNIRETAKAKRGTYRERRSESEESSDWHTVDDVVGL"
     misc_feature    534..668
                     /gene="LOC139904196"
                     /note="BSD domain; Region: BSD; pfam03909"
                     /db_xref="CDD:461089"
ORIGIN      
        1 aaaacttaca atttcaagaa cttcaaaaac cctaatcaac catgtcttgc ttttcaatcc
       61 ccgatccact ctactccgac aacgacgacg atactcctcc gccgtccccc accgccacca
      121 ccggaaaacc agacttctcc gtctttaaac aaacaatcgg ccgtcaattc aagaacgttg
      181 ctacatttct cgccccacca ccacaacaat cgtcttcctc ttcaccgcca cagacactgt
      241 ctcatgattc tggcgaactt accggcgagg cttcgccgtc ttctattgaa ggtgtaaaga
      301 atgatctggc tgaaattggg gctagtttta aaacagggtt atctttgtta tcccccaaga
      361 aagctgttac tcaattttca aaattggcat caaatttgct tcaatctgat aaaggggaca
      421 acgatgtttt cgaaaaggtt tctggggtta ctgaggatct tgttcttttt gttggaatgc
      481 tttcaaatcg cccgaattta tggattgatt tcccattatc tttaagcggc aaagaattca
      541 gtatgtccag cattcaaaaa gatcacactg tagccataga acaacttgta ccaagtatta
      601 ccactttgag gcatacagtt cagaattaca tgagtgaaca acagttttgg atgacctatt
      661 ttgtcctgat gtttccacgg tttaatgagg atgattatta taaacatctg ttaacctcag
      721 agattgtttt ggtgtatgat gaagttatgg agaaactaag aaacagaaag aacacttttc
      781 aagaaactga tgctttgtgt gagactagta atgcaccacc gtataggagg aaaaacagga
      841 accaagagga tgatatttct gtatgtgatc tagacaatga aacatcatcg ggagttagac
      901 agacacaaag tagtaagctg tcttctgcga atgaatttag tgactgggtt cgtcttagtg
      961 acgcttcaaa agcaaaccgt tcaacgtatc atgaaggacg ttcatataaa agtgattcct
     1021 cagttgatgg cggtaatcaa agtaataaga accaagaaga agatgtttct tctgcaagtg
     1081 aaactagtga ttgggttaac atcagagaaa ctgcaaaagc aaagcgtgga acgtatcgtg
     1141 agagacgttc agaaagtgaa gagtcgagtg actggcatac tgtcgatgat gttgttggtc
     1201 tataagacac cgtggatggg ttctgttttt tagtaaatct tacataattg tgcatttccc
     1261 tttttgggtg tttcatatac tacttctgga ttttaatatg gttacaggtg atgatttgat
     1321 caaatagtca ttagagggtg tgtaaattca cattcacatt gtaaatgata ctccattgct
     1381 cgtggtttta ttatattaat ataattgttt
//
LOCUS       XM_071886128            2846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904197), mRNA.
ACCESSION   XM_071886128
VERSION     XM_071886128.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2846
                     /gene="LOC139904197"
                     /note="uncharacterized LOC139904197; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904197"
     CDS             201..2519
                     /gene="LOC139904197"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742229.1"
                     /db_xref="GeneID:139904197"
                     /translation="MMENNNSSRMDVSLSAVDADLISVTQTLAKEAHEFFQSGKYADC
                     LRVLNQILEKNSDDPKILHNIAIVENFQDGFSNPKRFLETLDNLKNRSEKLAHSAGQN
                     AEALNNRIKALGNKGNNVVANLADDFDASVTTFNIAVSLYHLHKYEKCFSILERLYQN
                     IEPLDERVARHVCLLLLDVSLVCHHASRAADVINYLERVGGNSLGGSQGESGNITLQQ
                     LINPVTKSTSAPSNVIISESIHSDSSANTNGPESPLARTHSEETLIESLMSTLDVSGG
                     QNLTRPLNDVTRTQTDDSLITTPDLRLKVHLYKVWVLILARNLKAAKREVKMAMNIAL
                     GKDYVLALFLKSQLEYARNNHPKAIKLLMASSVTQTVPGTSALYYNNLGCIYYQLGKY
                     QTSAVFFSKALSNATSQRKEKPMKLLSYSQDKSVLFVYNCGLVYLASGKPVLAVRCFQ
                     QAGSVFFNRPLLWLRIAECCIMFSEKKADIDVNVIGRGKWRQLAIEYCNSRNVLQLEP
                     NLSLTFAKSCLLNALHFLDSSDEISPHGLDVKVGQGFDSNGEVKESKVGNNVLLQSSI
                     NEYEGLCGKENKMILQAVLADLAFVHLELGNAVKALDTAKRLLRHPECSRVYVFLGHV
                     YAAEAYCLLNQPKEASEHLSCYLSEKNSTVLPYNQEDIDILQMRKTVDLEEPSLDQSV
                     PQGVSGSSFLKPEEGRGVLYANIAALAAAEGNIERAQEAITRALPVLPNCPEVVLTAT
                     YVDLVCGNTRDAVMKLKLCSRVRYLTGTFADK"
     misc_feature    order(276..278,285..290,297..302,306..308,378..380,
                     387..392,399..404,489..494,561..563,603..608,615..620,
                     627..629)
                     /gene="LOC139904197"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    276..359
                     /gene="LOC139904197"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    372..545
                     /gene="LOC139904197"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    558..677
                     /gene="LOC139904197"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1110..1199
                     /gene="LOC139904197"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    <1218..1604
                     /gene="LOC139904197"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; Region: NlpI; COG4785"
                     /db_xref="CDD:443815"
     misc_feature    1221..1307
                     /gene="LOC139904197"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(1227..1232,1239..1244,1248..1250,1329..1331,
                     1338..1343,1350..1355,1359..1364,1452..1454,1488..1493,
                     1500..1505,1512..1514)
                     /gene="LOC139904197"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1323..1436
                     /gene="LOC139904197"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1449..1556
                     /gene="LOC139904197"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     polyA_site      2846
                     /gene="LOC139904197"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attacgaacc ctctctagat tctctcactc tataataata caataatata tacatactcg
       61 aataattagt tttttaattt cttagggttt cagtcgatca tttttgttcg tgaggcatat
      121 gtcagtgttt gtggataatt agaatacgaa agttagggtt tttgaattta attgtatcga
      181 attcgtttta attgggggaa atgatggaga acaacaacag tagtaggatg gatgtatcat
      241 tatctgcggt tgatgcggat ttgatatctg ttacgcaaac gttagcgaaa gaagcgcatg
      301 agttttttca gtcagggaag tatgctgatt gtcttagggt tttgaatcag atcctggaga
      361 agaactctga tgatccgaag attcttcata acattgctat tgtggaaaac tttcaagatg
      421 gattttcaaa tccaaagaga tttttggaaa cgcttgataa tctcaagaat cgaagcgaga
      481 agcttgctca ttcagctggg caaaatgcag aggcattgaa taataggatt aaagctttgg
      541 gaaataaggg caataatgtt gtggccaatt tagctgacga ttttgatgct tcagtgacaa
      601 ccttcaacat agcagttagc ctctaccatc tacacaaata tgagaagtgt ttctctattc
      661 tggagagatt atatcaaaat attgaaccat tagacgagag ggtggctcgc catgtttgtc
      721 tcttgttact agacgtttcc ttagtatgcc atcatgcttc aagagctgca gacgtgatca
      781 attatttgga gagagtgggc ggcaatagct taggtggcag tcaaggtgag tccggaaaca
      841 tcactctgca acagctaata aacccagtga caaaatccac gtcagcaccc agcaatgtaa
      901 ttatatcaga atcaattcat tctgattcat ctgccaacac aaacggtccc gaaagtcctt
      961 tagctcgaac tcattcagag gaaacactca ttgaatctct aatgtcaact ctcgatgtca
     1021 gtgggggcca aaaccttaca agacccttaa atgatgtaac aagaacccaa actgacgact
     1081 ctctcattac aacacccgat ttaaggctga aagtgcattt atacaaagtt tgggttctga
     1141 tccttgctag aaatctcaaa gcagccaagc gtgaagtcaa aatggccatg aacatagccc
     1201 ttggaaaaga ttatgtgctc gctttgtttt tgaaatcaca acttgagtat gctagaaata
     1261 accatccaaa ggctataaag cttctgatgg catcatcagt cactcaaact gtacccggaa
     1321 cttcagcttt atattacaac aatctcggat gcatctacta tcaacttgga aaataccaaa
     1381 cttcagctgt ctttttctca aaggcactaa gtaacgccac ttcacaaagg aaggaaaaac
     1441 ctatgaaact gttgagttac tcgcaggaca aatctgtgct ctttgtatac aactgtggtc
     1501 tagtttatct ggccagtggg aaaccggtac ttgcagttcg atgttttcaa caggcaggtt
     1561 cggtcttctt taaccggcct ctcttatggc ttcgaatcgc tgagtgctgc atcatgtttt
     1621 cagaaaagaa agctgatata gatgttaatg ttatcggtcg gggaaaatgg agacaacttg
     1681 ctatagagta ctgtaattca agaaatgtgt tgcagctcga gcccaacctt tcactgacat
     1741 ttgctaaaag ctgtcttttg aatgcgctac actttctgga tagctctgat gagataagtc
     1801 cccacgggtt agatgtaaaa gtgggtcagg gttttgactc aaatggagaa gtcaaagagt
     1861 cgaaggttgg taacaatgtg ttgttacaga gctcgatcaa tgaatacgag ggcctttgtg
     1921 gaaaagaaaa caagatgata ttgcaagcag tgcttgctga cctggcgttc gttcacttgg
     1981 aattggggaa tgcagtgaag gcattggata ctgctaagcg tcttttgaga catccagaat
     2041 gttccagagt atacgttttt ctgggacatg tttatgcagc tgaagcttat tgtctcttga
     2101 accagcctaa ggaagcttct gaacatttgt catgttattt atcagaaaaa aatagcaccg
     2161 tgttacctta caatcaagaa gatattgaca tcttgcaaat gaggaaaacc gtggatctcg
     2221 aggagccaag tttggaccaa tcggtaccac aaggtgtttc tggatcttca tttcttaagc
     2281 ccgaagaggg tcgtggggtc ctgtatgcaa acattgctgc actggcagct gctgaaggta
     2341 atatcgagag ggcgcaagag gccatcacac gagcattgcc ggtattaccc aactgcccgg
     2401 aagtcgttct tactgcaact tacgtagatt tggtgtgtgg gaacactcga gatgcagtga
     2461 tgaagttgaa actatgcagt cgtgtacgat atcttactgg cacatttgca gacaagtgat
     2521 tgttggtgga taagaaatca aggctttgag agtgtgtagg taggtgaaac aatcctctga
     2581 aaccgaggat ttgatttgta acatatatat agctcaaagt tcagggtaaa aagttgtttt
     2641 tctttggtga ctcgtttttt gcgccttttt ttcttcttct aattctgttg gttattagat
     2701 ttcagagatc agtcgatcgg tcttgactct ttaacggagt tctccaatag atgtgagatg
     2761 tagtggggaa ttttttttga atatgttgat gtactgattt gagagatgtt tagttaattg
     2821 ttttaatggg acttaaaatt caaata
//
LOCUS       XM_071886129            2475 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904198), transcript variant X1, mRNA.
ACCESSION   XM_071886129
VERSION     XM_071886129.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2475
                     /gene="LOC139904198"
                     /note="uncharacterized LOC139904198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904198"
     CDS             1810..2277
                     /gene="LOC139904198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742230.1"
                     /db_xref="GeneID:139904198"
                     /translation="MLRVLDGIKVGNGSDVVADVGVGGSGTVENVGGLDGIKVQDNGI
                     DVVADAGVGGSGTVENVGVLDGIRVHSNGSGVMNSELPSPAVVADAGVGFGVVEDDVN
                     ISGTLGICGVVGNFGNEVDNIVEASPVMVATAGLGLMIVVFMLRWLTGRYNIL"
ORIGIN      
        1 tcactctttg aatctatgtt ttggatctga tattcaaata aaatagtcgt caacatcgat
       61 ttctccctgt tttagacgaa agttacaatt tatgttttca atctgtcaaa aattgaaaca
      121 ctactcttac attgaatcga tattcagatg aaactgttct gaacatgtgt tagatcagaa
      181 catatgttac atcagacact actactgaag ttgtttatca attctatcga taattttagt
      241 tgaaagaaga tatcatttga tgatgaacaa tcgatctacc aaagatctat gttcaaacct
      301 ccacggattc taaatacctg ttgttcattg taatatggaa tgtgatggat tttcttactg
      361 gtttgcaatt ggcattattt tcgttggtgg aagatgggat tttagactgg caggttcttg
      421 cgtaaaggaa cattctggag tatttgttta caaattacaa ttgtgctgtg atgggttgtt
      481 gaagacatga ctgtaggatg gcaaaagtac ccctaaccga tggagaaatc cagaacctgg
      541 catttttgag tcgggcttgg ctgggtatga ggatggtgtc aagtgcttat gtggattcgg
      601 gttcatgtcc aacaaccgat tctgctcaat ccagaagagg atgcccgaaa ttcattatcg
      661 ataacgtgtt cgagctagca attctggacc cagaatccac gagagaagta gcagctccag
      721 taacgaggac ttaaacaact gagtcagaat cacttacctg agcagtgagc acacatcact
      781 atcaccagtt gtactagcct taagatgatg cattaacaaa gtagtattag tatcatcatg
      841 tttatgatca catcctttta cacttgatca tatatgaatt tataggtttc tttcgtagta
      901 gctataaaaa tgtattgaat gtatgaatgt atgatatgtt aaatgcaggt acaatggcac
      961 agttgttcaa tgttgggcag agtgtgcatt attattctaa ggccatatca agatcattca
     1021 ccgtgatatc aaggccgtta accatcctat tatttgtaac tttgaagcag agatttcatt
     1081 ttcacactct gacttcatat cacaaatgaa tttctgacga tgatgatatc gagtttatgg
     1141 gctcaacaac ataaaggaca aatatttctt gctactcact tcgaaaagta tcattcgtct
     1201 tattgttatc atattcaggt tagaaatctt ggccgagtgt ggatgcttgt attgttgtgt
     1261 tgcttagcta acgttggcta actgaacaaa ggtgattgtg gtggtgaaga tgatggtaaa
     1321 ggaaaaaggt taaagattta tgaagatgat ggctggcgtt ggttggagga atcgtctacc
     1381 atcgatgatg attatgagcc tccgccttgg gcttatgtaa atgcttggaa aaattggggg
     1441 gtaagatctt taaccgatga tattcaagat ttaattccca ctcggaaatt gattcaaagc
     1501 aacgtcagca atggcgatgg tgaaggtttg gctgcaaatg atcttcttga taatgttgta
     1561 aatggtgaca cagaaaccct agtcactaat gtaattagtc aacaacttgt cggcttatta
     1621 aattctactg agattcaaga ttttccctca gggaagaaat aggtgaagat gctcacaaag
     1681 ctgataagga agaaacaaaa gaaaccctaa ttactgatgg cttggattct ttaaatgaca
     1741 atgcgattca cggtaattga agcgttgtgg tggctaatgc cggaggtggc ggcagtggca
     1801 ccgttgtgaa tgttaagagt tcttgatggt attaaggttg gtaatggaag cgatgtggtg
     1861 gctgatgtcg gagttggcgg aagtggcacc gttgagaacg ttggaggtct tgatggtatt
     1921 aaggttcaag ataatggaat cgatgtggtg gctgatgccg gagttggtgg cagtggaacc
     1981 gttgaaaacg ttggagttct tgatggtatt agggtccaca gtaatggaag cggtgtcatg
     2041 aattctgaac taccctctcc ggcggtggtg gctgatgccg gagttggctt cggtgtggtt
     2101 gaggatgatg tgaatatttc tggtactctt gggatctgtg gtgtcgtggg gaattttggt
     2161 aatgaagttg acaacattgt agaggcttct ccggtgatgg tggctactgc cggacttgga
     2221 ttgatgatcg tggtgttcat gctaaggtgg ttgactggaa ggtacaacat tctttaaata
     2281 aatagggata tattcgatat ttttcaatta gaagtacgta ctattctttt gaaattagca
     2341 agtaatgagt tgaatggttg gtttttgcat cataaaatcc ttcaattttt gttgttcatc
     2401 aataacagta ttgtgattgt gtttgtctgt attaagaaat ttacattaat ggataataga
     2461 tgatggatga tgctt
//
LOCUS       XM_071886130            2484 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904198), transcript variant X2, mRNA.
ACCESSION   XM_071886130
VERSION     XM_071886130.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2484
                     /gene="LOC139904198"
                     /note="uncharacterized LOC139904198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904198"
     CDS             1819..2286
                     /gene="LOC139904198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742231.1"
                     /db_xref="GeneID:139904198"
                     /translation="MLRVLDGIKVGNGSDVVADVGVGGSGTVENVGGLDGIKVQDNGI
                     DVVADAGVGGSGTVENVGVLDGIRVHSNGSGVMNSELPSPAVVADAGVGFGVVEDDVN
                     ISGTLGICGVVGNFGNEVDNIVEASPVMVATAGLGLMIVVFMLRWLTGRYNIL"
ORIGIN      
        1 tcactctttg aatctatgtt ttggatctga tattcaaata aaatagtcgt caacatcgat
       61 ttctccctgt tttagacgaa agttacaatt tatgttttca atctgtcaaa aattgaaaca
      121 ctactcttac attgaatcga tattcagatg aaactgttct gaacatgtgt tagatcagaa
      181 catatgttac atcagacact actactgaag ttgtttatca attctatcga taattttagt
      241 tgaaagaaga tatcatttga tgatgaacaa tcgatctacc aaagatctat gttcaaacct
      301 ccacggattc taaatacctg ttgttcattg taatatggaa tgtgatggat tttcttactg
      361 gtttgcaatt ggcattattt tcgttggtgg aagatgggat tttagactgg caggttcttg
      421 cgtaaaggaa cattctggag tatttgttta caaattacaa ttgtgctgtg atgggttgtt
      481 gaagacatga ctgatggcaa aagtacccct aaccgatgga gaaatccaga acctggcatt
      541 tttgagtcgg gcttggctgg gtatgaggat ggtgtcaagt gcttatgtgg attcgggttc
      601 atgtccaaca accgattctg ctcaatccag aagaggatgc ccgaaattca ttatcgataa
      661 cgtgttcgag ctagcaattc tggacccaga atccacgaga gaagtagcag ctccagtaac
      721 gaggacttaa acaactgagt cagaatcact tacctgagca gtgagcacac atcactatca
      781 ccagttgtac tagccttaag atgatgcatt aacaaagtag tattagtatc atcatgttta
      841 tgatcacatc cttttacact tgatcatata tgaatttata ggtttctttc gtagtagcta
      901 taaaaatgta ttgaatgtat gaatgtatga tatgttaaat gcaggtacaa tggcacagtt
      961 gttcaatgtt gggcagagtg tgcattatta ttctaaggcc atatcaagat cattcaccgt
     1021 gatatcaagg ccgttaacca tcctattatt tgtaactttg aagcagagat ttcattttca
     1081 cactctgact tcatatcaca aatgaatttc tgacgatgat gatatcgagt ttatgggctc
     1141 aacaacataa aggacaaata tttcttgcta ctcacttcga aaagtatcat tcgtcttatt
     1201 gttatcatat tcaggttaga aatcttggcc gagtgtggat gcttgtattg ttgtgttgct
     1261 tagctaacgt tggctaactg aacaaagatg aagagaccag gtgattgtgg tggtgaagat
     1321 gatggtaaag gaaaaaggtt aaagatttat gaagatgatg gctggcgttg gttggaggaa
     1381 tcgtctacca tcgatgatga ttatgagcct ccgccttggg cttatgtaaa tgcttggaaa
     1441 aattgggggg taagatcttt aaccgatgat attcaagatt taattcccac tcggaaattg
     1501 attcaaagca acgtcagcaa tggcgatggt gaaggtttgg ctgcaaatga tcttcttgat
     1561 aatgttgtaa atggtgacac agaaacccta gtcactaatg taattagtca acaacttgtc
     1621 ggcttattaa attctactga gattcaagat tttccctcag ggaagaaata ggtgaagatg
     1681 ctcacaaagc tgataaggaa gaaacaaaag aaaccctaat tactgatggc ttggattctt
     1741 taaatgacaa tgcgattcac ggtaattgaa gcgttgtggt ggctaatgcc ggaggtggcg
     1801 gcagtggcac cgttgtgaat gttaagagtt cttgatggta ttaaggttgg taatggaagc
     1861 gatgtggtgg ctgatgtcgg agttggcgga agtggcaccg ttgagaacgt tggaggtctt
     1921 gatggtatta aggttcaaga taatggaatc gatgtggtgg ctgatgccgg agttggtggc
     1981 agtggaaccg ttgaaaacgt tggagttctt gatggtatta gggtccacag taatggaagc
     2041 ggtgtcatga attctgaact accctctccg gcggtggtgg ctgatgccgg agttggcttc
     2101 ggtgtggttg aggatgatgt gaatatttct ggtactcttg ggatctgtgg tgtcgtgggg
     2161 aattttggta atgaagttga caacattgta gaggcttctc cggtgatggt ggctactgcc
     2221 ggacttggat tgatgatcgt ggtgttcatg ctaaggtggt tgactggaag gtacaacatt
     2281 ctttaaataa atagggatat attcgatatt tttcaattag aagtacgtac tattcttttg
     2341 aaattagcaa gtaatgagtt gaatggttgg tttttgcatc ataaaatcct tcaatttttg
     2401 ttgttcatca ataacagtat tgtgattgtg tttgtctgta ttaagaaatt tacattaatg
     2461 gataatagat gatggatgat gctt
//
LOCUS       XM_071886131            2360 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904198), transcript variant X3, mRNA.
ACCESSION   XM_071886131
VERSION     XM_071886131.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2360
                     /gene="LOC139904198"
                     /note="uncharacterized LOC139904198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904198"
     CDS             1695..2162
                     /gene="LOC139904198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742232.1"
                     /db_xref="GeneID:139904198"
                     /translation="MLRVLDGIKVGNGSDVVADVGVGGSGTVENVGGLDGIKVQDNGI
                     DVVADAGVGGSGTVENVGVLDGIRVHSNGSGVMNSELPSPAVVADAGVGFGVVEDDVN
                     ISGTLGICGVVGNFGNEVDNIVEASPVMVATAGLGLMIVVFMLRWLTGRYNIL"
ORIGIN      
        1 tcactctttg aatctatgtt ttggatctga tattcaaata aaatagtcgt caacatcgat
       61 ttctccctgt tttagacgaa agttacaatt tatgttttca atctgtcaaa aattgaaaca
      121 ctactcttac attgaatcga tattcagatg aaactgttct gaacatgtgt tagatcagaa
      181 catatgttac atcagacact actactgaag ttgtttatca attctatcga taattttagt
      241 tgaaagaaga tatcatttga tgatgaacaa tcgatctacc aaagatctat gttcaaacct
      301 ccacggattc taaatacctg ttgttcattg taatatggaa tgtgatggat tttcttactg
      361 gtttgcaatt ggcattattt tcgttggtgg aagatgggat tttagactgg caggttcttg
      421 cgtaaaggaa cattctggag tatttgttta caaattacaa ttgtgctgtg atgggttgtt
      481 gaagacatga ctgtaggatg gcaaaagtac ccctaaccga tggagaaatc cagaacctgg
      541 catttttgag tcgggcttgg ctgggtatga ggatggtgtc aagtgcttat gtggattcgg
      601 gttcatgtcc aacaaccgat tctgctcaat ccagaagagg atgcccgaaa ttcattatcg
      661 ataacgtgtt cgagctagca attctggacc cagaatccac gagagaagta gcagctccag
      721 taacgaggac ttaaacaact gagtcagaat cacttacctg agcagtgagc acacatcact
      781 atcaccagtt gtactagcct taagatgatg cattaacaaa gtacaatggc acagttgttc
      841 aatgttgggc agagtgtgca ttattattct aaggccatat caagatcatt caccgtgata
      901 tcaaggccgt taaccatcct attatttgta actttgaagc agagatttca ttttcacact
      961 ctgacttcat atcacaaatg aatttctgac gatgatgata tcgagtttat gggctcaaca
     1021 acataaagga caaatatttc ttgctactca cttcgaaaag tatcattcgt cttattgtta
     1081 tcatattcag gttagaaatc ttggccgagt gtggatgctt gtattgttgt gttgcttagc
     1141 taacgttggc taactgaaca aagatgaaga gaccaggtga ttgtggtggt gaagatgatg
     1201 gtaaaggaaa aaggttaaag atttatgaag atgatggctg gcgttggttg gaggaatcgt
     1261 ctaccatcga tgatgattat gagcctccgc cttgggctta tgtaaatgct tggaaaaatt
     1321 ggggggtaag atctttaacc gatgatattc aagatttaat tcccactcgg aaattgattc
     1381 aaagcaacgt cagcaatggc gatggtgaag gtttggctgc aaatgatctt cttgataatg
     1441 ttgtaaatgg tgacacagaa accctagtca ctaatgtaat tagtcaacaa cttgtcggct
     1501 tattaaattc tactgagatt caagattttc cctcagggaa gaaataggtg aagatgctca
     1561 caaagctgat aaggaagaaa caaaagaaac cctaattact gatggcttgg attctttaaa
     1621 tgacaatgcg attcacggta attgaagcgt tgtggtggct aatgccggag gtggcggcag
     1681 tggcaccgtt gtgaatgtta agagttcttg atggtattaa ggttggtaat ggaagcgatg
     1741 tggtggctga tgtcggagtt ggcggaagtg gcaccgttga gaacgttgga ggtcttgatg
     1801 gtattaaggt tcaagataat ggaatcgatg tggtggctga tgccggagtt ggtggcagtg
     1861 gaaccgttga aaacgttgga gttcttgatg gtattagggt ccacagtaat ggaagcggtg
     1921 tcatgaattc tgaactaccc tctccggcgg tggtggctga tgccggagtt ggcttcggtg
     1981 tggttgagga tgatgtgaat atttctggta ctcttgggat ctgtggtgtc gtggggaatt
     2041 ttggtaatga agttgacaac attgtagagg cttctccggt gatggtggct actgccggac
     2101 ttggattgat gatcgtggtg ttcatgctaa ggtggttgac tggaaggtac aacattcttt
     2161 aaataaatag ggatatattc gatatttttc aattagaagt acgtactatt cttttgaaat
     2221 tagcaagtaa tgagttgaat ggttggtttt tgcatcataa aatccttcaa tttttgttgt
     2281 tcatcaataa cagtattgtg attgtgtttg tctgtattaa gaaatttaca ttaatggata
     2341 atagatgatg gatgatgctt
//
LOCUS       XM_071886132            2304 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904198), transcript variant X4, mRNA.
ACCESSION   XM_071886132
VERSION     XM_071886132.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2304
                     /gene="LOC139904198"
                     /note="uncharacterized LOC139904198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904198"
     CDS             1639..2106
                     /gene="LOC139904198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742233.1"
                     /db_xref="GeneID:139904198"
                     /translation="MLRVLDGIKVGNGSDVVADVGVGGSGTVENVGGLDGIKVQDNGI
                     DVVADAGVGGSGTVENVGVLDGIRVHSNGSGVMNSELPSPAVVADAGVGFGVVEDDVN
                     ISGTLGICGVVGNFGNEVDNIVEASPVMVATAGLGLMIVVFMLRWLTGRYNIL"
ORIGIN      
        1 tcactctttg aatctatgtt ttggatctga tattcaaata aaatagtcgt caacatcgat
       61 ttctccctgt tttagacgaa agttacaatt tatgttttca atctgtcaaa aattgaaaca
      121 ctactcttac attgaatcga tattcagatg aaactgttct gaacatgtgt tagatcagaa
      181 catatgttac atcagacact actactgaag ttgtttatca attctatcga taattttagt
      241 tgaaagaaga tatcatttga tgatgaacaa tcgatctacc aaagatctat gttcaaacct
      301 ccacggattc taaatacctg ttgttcattg taatatggaa tgtgatggat tttcttactg
      361 gtttgcaatt ggcattattt tcgttggtgg aagatgggat tttagactgg caggttcttg
      421 cgtaaaggaa cattctggag tatttgttta caaattacaa ttgtgctgtg atgggttgtt
      481 gaagacatga ctgtaggatg gcaaaagtac ccctaaccga tggagaaatc cagaacctgg
      541 catttttgag tcgggcttgg ctgggtatga ggatggtgtc aagtgcttat gtggattcgg
      601 gttcatgtcc aacaaccgat tctgctcaat ccagaagagg atgcccgaaa ttcattatcg
      661 ataacgtgtt cgagctagca attctggacc cagaatccac gagagaagta gcagctccag
      721 taacgaggac ttaaacaact gagtcagaat cacttacctg agcagtacaa tggcacagtt
      781 gttcaatgtt gggcagagtg tgcattatta ttctaaggcc atatcaagat cattcaccgt
      841 gatatcaagg ccgttaacca tcctattatt tgtaactttg aagcagagat ttcattttca
      901 cactctgact tcatatcaca aatgaatttc tgacgatgat gatatcgagt ttatgggctc
      961 aacaacataa aggacaaata tttcttgcta ctcacttcga aaagtatcat tcgtcttatt
     1021 gttatcatat tcaggttaga aatcttggcc gagtgtggat gcttgtattg ttgtgttgct
     1081 tagctaacgt tggctaactg aacaaagatg aagagaccag gtgattgtgg tggtgaagat
     1141 gatggtaaag gaaaaaggtt aaagatttat gaagatgatg gctggcgttg gttggaggaa
     1201 tcgtctacca tcgatgatga ttatgagcct ccgccttggg cttatgtaaa tgcttggaaa
     1261 aattgggggg taagatcttt aaccgatgat attcaagatt taattcccac tcggaaattg
     1321 attcaaagca acgtcagcaa tggcgatggt gaaggtttgg ctgcaaatga tcttcttgat
     1381 aatgttgtaa atggtgacac agaaacccta gtcactaatg taattagtca acaacttgtc
     1441 ggcttattaa attctactga gattcaagat tttccctcag ggaagaaata ggtgaagatg
     1501 ctcacaaagc tgataaggaa gaaacaaaag aaaccctaat tactgatggc ttggattctt
     1561 taaatgacaa tgcgattcac ggtaattgaa gcgttgtggt ggctaatgcc ggaggtggcg
     1621 gcagtggcac cgttgtgaat gttaagagtt cttgatggta ttaaggttgg taatggaagc
     1681 gatgtggtgg ctgatgtcgg agttggcgga agtggcaccg ttgagaacgt tggaggtctt
     1741 gatggtatta aggttcaaga taatggaatc gatgtggtgg ctgatgccgg agttggtggc
     1801 agtggaaccg ttgaaaacgt tggagttctt gatggtatta gggtccacag taatggaagc
     1861 ggtgtcatga attctgaact accctctccg gcggtggtgg ctgatgccgg agttggcttc
     1921 ggtgtggttg aggatgatgt gaatatttct ggtactcttg ggatctgtgg tgtcgtgggg
     1981 aattttggta atgaagttga caacattgta gaggcttctc cggtgatggt ggctactgcc
     2041 ggacttggat tgatgatcgt ggtgttcatg ctaaggtggt tgactggaag gtacaacatt
     2101 ctttaaataa atagggatat attcgatatt tttcaattag aagtacgtac tattcttttg
     2161 aaattagcaa gtaatgagtt gaatggttgg tttttgcatc ataaaatcct tcaatttttg
     2221 ttgttcatca ataacagtat tgtgattgtg tttgtctgta ttaagaaatt tacattaatg
     2281 gataatagat gatggatgat gctt
//
LOCUS       XM_071886133            2277 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904198), transcript variant X5, mRNA.
ACCESSION   XM_071886133
VERSION     XM_071886133.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2277
                     /gene="LOC139904198"
                     /note="uncharacterized LOC139904198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904198"
     CDS             1612..2079
                     /gene="LOC139904198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742234.1"
                     /db_xref="GeneID:139904198"
                     /translation="MLRVLDGIKVGNGSDVVADVGVGGSGTVENVGGLDGIKVQDNGI
                     DVVADAGVGGSGTVENVGVLDGIRVHSNGSGVMNSELPSPAVVADAGVGFGVVEDDVN
                     ISGTLGICGVVGNFGNEVDNIVEASPVMVATAGLGLMIVVFMLRWLTGRYNIL"
ORIGIN      
        1 tcactctttg aatctatgtt ttggatctga tattcaaata aaatagtcgt caacatcgat
       61 ttctccctgt tttagacgaa agttacaatt tatgttttca atctgtcaaa aattgaaaca
      121 ctactcttac attgaatcga tattcagatg aaactgttct gaacatgtgt tagatcagaa
      181 catatgttac atcagacact actactgaag ttgtttatca attctatcga taattttagt
      241 tgaaagaaga tatcatttga tgatgaacaa tcgatctacc aaagatctat gttcaaacct
      301 ccacggattc taaatacctg ttgttcattg taatatggaa tgtgatggat tttcttactg
      361 gtttgcaatt ggcattattt tcgttggtgg aagatgggat tttagactgg caggttcttg
      421 cgtaaaggaa cattctggag tatttgttta caaattacaa ttgtgctgtg atgggttgtt
      481 gaagacatga ctgtaggatg gcaaaagtac ccctaaccga tggagaaatc cagaacctgg
      541 catttttgag tcgggcttgg ctgggtatga ggatggtgtc aagtgcttat gtggattcgg
      601 gttcatgtcc aacaaccgat tctgctcaat ccagaagagg atgcccgaaa ttcattatcg
      661 ataacgtgtt cgagctagca attctggacc cagaatccac gagagaagta gcagctccag
      721 taacgaggac ttaaacaact gagtcagaat cacttacctg agcagtgagc acacatcact
      781 atcaccagtt gtactagcct taagatgatg cattaacaaa gtagtattag tatcatcatg
      841 tttatgatca catcctttta cacttgatca tatatgaatt tataggtttc tttcgtagta
      901 gctataaaaa tgtattgaat gtatgaatgt atgatatgtt aaatgcaggt acaatggcac
      961 agttgttcaa tgttgggcag agtgtgcatt attattctaa ggccatatca agatcattca
     1021 ccgtgatatc aaggccgtta accatcctat tatttgtaac tttgaagcag agatttcatt
     1081 ttcacactct gacttcatat cacaaatgaa tttctgacga tgatgatatc gagtttatgg
     1141 gctcaacaac ataaaggaca aatatttctt gctactcact tcgaaaagta tcattcgtct
     1201 tattgttatc atattcaggt tagaaatctt ggccgagtgt ggatgcttgt attgttgtgt
     1261 tgcttagcta acgttggcta actgaacaaa gatgaagaga ccaggtgatt gtggtggtga
     1321 agatgatggt aaaggaaaaa ggttaaagat ttatgaagat gatggctggc gttggttgga
     1381 ggaatcgtct accatcgatg atgattatga gcctccgcct tgggcttatg taaatgcttg
     1441 gaaaaattgg gggggaagaa ataggtgaag atgctcacaa agctgataag gaagaaacaa
     1501 aagaaaccct aattactgat ggcttggatt ctttaaatga caatgcgatt cacggtaatt
     1561 gaagcgttgt ggtggctaat gccggaggtg gcggcagtgg caccgttgtg aatgttaaga
     1621 gttcttgatg gtattaaggt tggtaatgga agcgatgtgg tggctgatgt cggagttggc
     1681 ggaagtggca ccgttgagaa cgttggaggt cttgatggta ttaaggttca agataatgga
     1741 atcgatgtgg tggctgatgc cggagttggt ggcagtggaa ccgttgaaaa cgttggagtt
     1801 cttgatggta ttagggtcca cagtaatgga agcggtgtca tgaattctga actaccctct
     1861 ccggcggtgg tggctgatgc cggagttggc ttcggtgtgg ttgaggatga tgtgaatatt
     1921 tctggtactc ttgggatctg tggtgtcgtg gggaattttg gtaatgaagt tgacaacatt
     1981 gtagaggctt ctccggtgat ggtggctact gccggacttg gattgatgat cgtggtgttc
     2041 atgctaaggt ggttgactgg aaggtacaac attctttaaa taaataggga tatattcgat
     2101 atttttcaat tagaagtacg tactattctt ttgaaattag caagtaatga gttgaatggt
     2161 tggtttttgc atcataaaat ccttcaattt ttgttgttca tcaataacag tattgtgatt
     2221 gtgtttgtct gtattaagaa atttacatta atggataata gatgatggat gatgctt
//
LOCUS       XM_071886134            2287 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904198), transcript variant X6, mRNA.
ACCESSION   XM_071886134
VERSION     XM_071886134.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2287
                     /gene="LOC139904198"
                     /note="uncharacterized LOC139904198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904198"
     CDS             1622..2089
                     /gene="LOC139904198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742235.1"
                     /db_xref="GeneID:139904198"
                     /translation="MLRVLDGIKVGNGSDVVADVGVGGSGTVENVGGLDGIKVQDNGI
                     DVVADAGVGGSGTVENVGVLDGIRVHSNGSGVMNSELPSPAVVADAGVGFGVVEDDVN
                     ISGTLGICGVVGNFGNEVDNIVEASPVMVATAGLGLMIVVFMLRWLTGRYNIL"
ORIGIN      
        1 tcactctttg aatctatgtt ttggatctga tattcaaata aaatagtcgt caacatcgat
       61 ttctccctgt tttagacgaa agttacaatt tatgttttca atctgtcaaa aattgaaaca
      121 ctactcttac attgaatcga tattcagatg aaactgttct gaacatgtgt tagatcagaa
      181 catatgttac atcagacact actactgaag ttgtttatca attctatcga taattttagt
      241 tgaaagaaga tatcatttga tgatgaacaa tcgatctacc aaagatctat gttcaaacct
      301 ccacggattc taaatacctg ttgttcattg taatatggaa tgtgatggat tttcttactg
      361 gtttgcaatt ggcattattt tcgttggtgg aagatgggat tttagactgg caggttcttg
      421 cgtaaaggaa cattctggag tatttgttta caaattacaa ttgtgctgtg atgggttgtt
      481 gaagacatga ctgtaggatg gcaaaagtac ccctaaccga tggagaaatc cagaacctgg
      541 catttttgag tcgggcttgg ctgggtatga ggatggtgtc aagtgcttat gtggattcgg
      601 gttcatgtcc aacaaccgat tctgctcaat ccagaagagg atgcccgaaa ttcattatcg
      661 ataacgtgtt cgagctagca attctggacc cagaatccac gagagaagta gcagctccag
      721 taacgaggac ttaaacaact gagtcaggta caatggcaca gttgttcaat gttgggcaga
      781 gtgtgcatta ttattctaag gccatatcaa gatcattcac cgtgatatca aggccgttaa
      841 ccatcctatt atttgtaact ttgaagcaga gatttcattt tcacactctg acttcatatc
      901 acaaatgaat ttctgacgat gatgatatcg agtttatggg ctcaacaaca taaaggacaa
      961 atatttcttg ctactcactt cgaaaagtat cattcgtctt attgttatca tattcaggtt
     1021 agaaatcttg gccgagtgtg gatgcttgta ttgttgtgtt gcttagctaa cgttggctaa
     1081 ctgaacaaag atgaagagac caggtgattg tggtggtgaa gatgatggta aaggaaaaag
     1141 gttaaagatt tatgaagatg atggctggcg ttggttggag gaatcgtcta ccatcgatga
     1201 tgattatgag cctccgcctt gggcttatgt aaatgcttgg aaaaattggg gggtaagatc
     1261 tttaaccgat gatattcaag atttaattcc cactcggaaa ttgattcaaa gcaacgtcag
     1321 caatggcgat ggtgaaggtt tggctgcaaa tgatcttctt gataatgttg taaatggtga
     1381 cacagaaacc ctagtcacta atgtaattag tcaacaactt gtcggcttat taaattctac
     1441 tgagattcaa gattttccct cagggaagaa ataggtgaag atgctcacaa agctgataag
     1501 gaagaaacaa aagaaaccct aattactgat ggcttggatt ctttaaatga caatgcgatt
     1561 cacggtaatt gaagcgttgt ggtggctaat gccggaggtg gcggcagtgg caccgttgtg
     1621 aatgttaaga gttcttgatg gtattaaggt tggtaatgga agcgatgtgg tggctgatgt
     1681 cggagttggc ggaagtggca ccgttgagaa cgttggaggt cttgatggta ttaaggttca
     1741 agataatgga atcgatgtgg tggctgatgc cggagttggt ggcagtggaa ccgttgaaaa
     1801 cgttggagtt cttgatggta ttagggtcca cagtaatgga agcggtgtca tgaattctga
     1861 actaccctct ccggcggtgg tggctgatgc cggagttggc ttcggtgtgg ttgaggatga
     1921 tgtgaatatt tctggtactc ttgggatctg tggtgtcgtg gggaattttg gtaatgaagt
     1981 tgacaacatt gtagaggctt ctccggtgat ggtggctact gccggacttg gattgatgat
     2041 cgtggtgttc atgctaaggt ggttgactgg aaggtacaac attctttaaa taaataggga
     2101 tatattcgat atttttcaat tagaagtacg tactattctt ttgaaattag caagtaatga
     2161 gttgaatggt tggtttttgc atcataaaat ccttcaattt ttgttgttca tcaataacag
     2221 tattgtgatt gtgtttgtct gtattaagaa atttacatta atggataata gatgatggat
     2281 gatgctt
//
LOCUS       XM_071886135            2115 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904198), transcript variant X7, mRNA.
ACCESSION   XM_071886135
VERSION     XM_071886135.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2115
                     /gene="LOC139904198"
                     /note="uncharacterized LOC139904198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904198"
     CDS             1450..1917
                     /gene="LOC139904198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742236.1"
                     /db_xref="GeneID:139904198"
                     /translation="MLRVLDGIKVGNGSDVVADVGVGGSGTVENVGGLDGIKVQDNGI
                     DVVADAGVGGSGTVENVGVLDGIRVHSNGSGVMNSELPSPAVVADAGVGFGVVEDDVN
                     ISGTLGICGVVGNFGNEVDNIVEASPVMVATAGLGLMIVVFMLRWLTGRYNIL"
ORIGIN      
        1 tcactctttg aatctatgtt ttggatctga tattcaaata aaatagtcgt caacatcgat
       61 ttctccctgt tttagacgaa agttacaatt tatgttttca atctgtcaaa aattgaaaca
      121 ctactcttac attgaatcga tattcagatg aaactgttct gaacatgtgt tagatcagaa
      181 catatgttac atcagacact actactgaag ttgtttatca attctatcga taattttagt
      241 tgaaagaaga tatcatttga tgatgaacaa tcgatctacc aaagatctat gttcaaacct
      301 ccacggattc taaatacctg ttgttcattg taatatggaa tgtgatggat tttcttactg
      361 gtttgcaatt ggcattattt tcgttggtgg aagatgggat tttagactgg caggttcttg
      421 cgtaaaggaa cattctggag tatttgttta caaattacaa ttgtgctgtg atgggttgtt
      481 gaagacatga ctgtaggatg gcaaaagtac ccctaaccga tggagaaatc cagaacctgg
      541 catttttgag tcgggcttgg ctgggtatga ggatggtgtc aagtgcttat gtggattcgg
      601 gttcatgtcc aacaaccgat tctgctcaat ccagaagagg atgcccgaaa ttcattatcg
      661 ataacgtgtt cgagctagca attctggacc cagaatccac gagagaagta gcagctccag
      721 taacgaggac ttaaacaact gagtcagaat cacttacctg agcagtgagc acacatcact
      781 atcaccagtt gtactagcct taagatgatg cattaacaaa gtagtattag tatcatcatg
      841 tttatgatca catcctttta cacttgatca tatatgaatt tataggtttc tttcgtagta
      901 gctataaaaa tgtattgaat gtatgaatgt atgatatgtt aaatgcaggt acaatggcac
      961 agttgttcaa tgttgggcag agtgtgcatt attattctaa ggccatatca agatcattca
     1021 ccgtgatatc aaggccgtta accatcctat tatttgtaac tttgaagcag agatttcatt
     1081 ttcacactct gacttcatat cacaaatgaa tttctgacga tgatgatatc gagtttatgg
     1141 gctcaacaac ataaaggaca aatatttctt gctactcact tcgaaaagta tcattcgtct
     1201 tattgttatc atattcaggt tagaaatctt ggccgagtgt ggatgcttgt attgttgtgt
     1261 tgcttagcta acgttggcta actgaacaaa gggaagaaat aggtgaagat gctcacaaag
     1321 ctgataagga agaaacaaaa gaaaccctaa ttactgatgg cttggattct ttaaatgaca
     1381 atgcgattca cggtaattga agcgttgtgg tggctaatgc cggaggtggc ggcagtggca
     1441 ccgttgtgaa tgttaagagt tcttgatggt attaaggttg gtaatggaag cgatgtggtg
     1501 gctgatgtcg gagttggcgg aagtggcacc gttgagaacg ttggaggtct tgatggtatt
     1561 aaggttcaag ataatggaat cgatgtggtg gctgatgccg gagttggtgg cagtggaacc
     1621 gttgaaaacg ttggagttct tgatggtatt agggtccaca gtaatggaag cggtgtcatg
     1681 aattctgaac taccctctcc ggcggtggtg gctgatgccg gagttggctt cggtgtggtt
     1741 gaggatgatg tgaatatttc tggtactctt gggatctgtg gtgtcgtggg gaattttggt
     1801 aatgaagttg acaacattgt agaggcttct ccggtgatgg tggctactgc cggacttgga
     1861 ttgatgatcg tggtgttcat gctaaggtgg ttgactggaa ggtacaacat tctttaaata
     1921 aatagggata tattcgatat ttttcaatta gaagtacgta ctattctttt gaaattagca
     1981 agtaatgagt tgaatggttg gtttttgcat cataaaatcc ttcaattttt gttgttcatc
     2041 aataacagta ttgtgattgt gtttgtctgt attaagaaat ttacattaat ggataataga
     2101 tgatggatga tgctt
//
LOCUS       XM_071886136            1661 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904198), transcript variant X8, mRNA.
ACCESSION   XM_071886136
VERSION     XM_071886136.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1661
                     /gene="LOC139904198"
                     /note="uncharacterized LOC139904198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904198"
     CDS             996..1463
                     /gene="LOC139904198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742237.1"
                     /db_xref="GeneID:139904198"
                     /translation="MLRVLDGIKVGNGSDVVADVGVGGSGTVENVGGLDGIKVQDNGI
                     DVVADAGVGGSGTVENVGVLDGIRVHSNGSGVMNSELPSPAVVADAGVGFGVVEDDVN
                     ISGTLGICGVVGNFGNEVDNIVEASPVMVATAGLGLMIVVFMLRWLTGRYNIL"
ORIGIN      
        1 taatgtaaat gtgtatcagg ttggtgtaca tttgagtaac tattatttaa gcttaggatt
       61 tgtacattga cctgattgtt catgatgtaa gaattactac cattttataa atggtaatat
      121 tcaacaatta aggtaaaatc ttcatatggt tttgttagaa tgagttgaag tcattctgtt
      181 cgagttggac tgattgcatt gcaattgggt tagggtttct tgcaaacttt ctttttacaa
      241 ttaagatttc attttcacac tctgacttca tatcacaaat gaatttctga cgatgatgat
      301 atcgagttta tgggctcaac aacataaagg acaaatattt cttgctactc acttcgaaaa
      361 gtatcattcg tcttattgtt atcatattca ggttagaaat cttggccgag tgtggatgct
      421 tgtattgttg tgttgcttag ctaacgttgg ctaactgaac aaagatgaag agaccaggtg
      481 attgtggtgg tgaagatgat ggtaaaggaa aaaggttaaa gatttatgaa gatgatggct
      541 ggcgttggtt ggaggaatcg tctaccatcg atgatgatta tgagcctccg ccttgggctt
      601 atgtaaatgc ttggaaaaat tggggggtaa gatctttaac cgatgatatt caagatttaa
      661 ttcccactcg gaaattgatt caaagcaacg tcagcaatgg cgatggtgaa ggtttggctg
      721 caaatgatct tcttgataat gttgtaaatg gtgacacaga aaccctagtc actaatgtaa
      781 ttagtcaaca acttgtcggc ttattaaatt ctactgagat tcaagatttt ccctcaggga
      841 agaaataggt gaagatgctc acaaagctga taaggaagaa acaaaagaaa ccctaattac
      901 tgatggcttg gattctttaa atgacaatgc gattcacggt aattgaagcg ttgtggtggc
      961 taatgccgga ggtggcggca gtggcaccgt tgtgaatgtt aagagttctt gatggtatta
     1021 aggttggtaa tggaagcgat gtggtggctg atgtcggagt tggcggaagt ggcaccgttg
     1081 agaacgttgg aggtcttgat ggtattaagg ttcaagataa tggaatcgat gtggtggctg
     1141 atgccggagt tggtggcagt ggaaccgttg aaaacgttgg agttcttgat ggtattaggg
     1201 tccacagtaa tggaagcggt gtcatgaatt ctgaactacc ctctccggcg gtggtggctg
     1261 atgccggagt tggcttcggt gtggttgagg atgatgtgaa tatttctggt actcttggga
     1321 tctgtggtgt cgtggggaat tttggtaatg aagttgacaa cattgtagag gcttctccgg
     1381 tgatggtggc tactgccgga cttggattga tgatcgtggt gttcatgcta aggtggttga
     1441 ctggaaggta caacattctt taaataaata gggatatatt cgatattttt caattagaag
     1501 tacgtactat tcttttgaaa ttagcaagta atgagttgaa tggttggttt ttgcatcata
     1561 aaatccttca atttttgttg ttcatcaata acagtattgt gattgtgttt gtctgtatta
     1621 agaaatttac attaatggat aatagatgat ggatgatgct t
//
LOCUS       XR_011778700             333 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904199), ncRNA.
ACCESSION   XR_011778700
VERSION     XR_011778700.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..333
                     /gene="LOC139904199"
                     /note="uncharacterized LOC139904199; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904199"
     ncRNA           1..333
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904199"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904199"
ORIGIN      
        1 tcttcaagaa tcaagcccta ataatcagtt ttgtcactaa atcactgttt cagtactcaa
       61 atatttggat ggaatggtgt ttgtgtgggt gttgatcgtg atagccttca cgtttgttat
      121 ctgcaatctg tgatgatttc tttggataat gatattttga ttattccggt ggagtcaaac
      181 tattgaagct aaagacataa cgcatggcga tatcttgtaa ctgttatgct tgggaccttc
      241 ggtacttcga ccgatgagtg tctacagtcg cactgcacat cgttagttta attaccttgc
      301 accagaaggt acagtctcat tatttcacaa ttg
//
LOCUS       XM_071886138            2429 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger BED
            domain-containing protein DAYSLEEPER-like (LOC139904201), mRNA.
ACCESSION   XM_071886138
VERSION     XM_071886138.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2429
                     /gene="LOC139904201"
                     /note="zinc finger BED domain-containing protein
                     DAYSLEEPER-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139904201"
     CDS             183..2246
                     /gene="LOC139904201"
                     /codon_start=1
                     /product="zinc finger BED domain-containing protein
                     DAYSLEEPER-like"
                     /protein_id="XP_071742239.1"
                     /db_xref="GeneID:139904201"
                     /translation="MDTSPIETNALVNVEMQPEYFDTPMNDVETQPTRRRKKKSTVWE
                     HFTIENVGAGVRRAVCKECFQSFAYSTGSKVAGTSHLKRHIAKGGCPVFLHNQDHNPS
                     TPFSAPTNKAANSGGSISNTPKRRYRTPAVSYSDFEPDRCRQEMAQMIIQHDYPLHMA
                     EHTGFMAFVHNLQPNFNMVNFDTVQGDCVATYLSEKQTIQKLIDGMPGRICLTLDLWS
                     SYHTTGYVFVTGQFIDSEWKIHKKLLNVVMEPYPESDSAFSHAVSTCLSDWNMEGRLF
                     SLTINQPLSETGINSLRGLLSVKNPNILDGQLLLTNCFARSLSCVAQEVLKSGEETVK
                     KVRDCVKYVKTSESLEEKFVALKQQLQVISTKTLSLDDHTQWNTTYEMLLAASELKEV
                     FSCLDTLDPDYSKGPNGEEWKLVDTLCTYLKLLFNTASLLTSSTVPTANTFFHEAWKL
                     QLELTRASTSEDQTISMLTKPIHESFDKYWKSCCLMLSIAVVMDPRFKMKLVEFSFTK
                     IYGDEAASFLKIVDEGIHELFLEYVALPLQLTPAFVDVVNGESGDVKQDDDGRGLNNG
                     LGLTDFDVYIMESTSQQSKSELDQYLDESLLPRSHEFDVMKWWKLHKVKYPTLSKMAH
                     DILTAPVSTVFGDAVFDTGAKEMDRYRCSLRPDTVEALFCAKDWMHNEPVETDDSVVK
                     MEFPI"
     misc_feature    303..437
                     /gene="LOC139904201"
                     /note="BED zinc finger; Region: ZnF_BED; smart00614"
                     /db_xref="CDD:214746"
     misc_feature    1479..1778
                     /gene="LOC139904201"
                     /note="Domain of unknown function (DUF4413); Region:
                     DUF4413; pfam14372"
                     /db_xref="CDD:433913"
     misc_feature    1941..2189
                     /gene="LOC139904201"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 aacaataaat aaacgtgaac cccaattcga taataatagt ccaatttgat tatactctgg
       61 tttaagccca atccgatcct cgttctccaa caaacctttc tggatcactt caattgcagg
      121 ctgctgcgac ctggatctca tcgctgtttc atcaatttca gccatcacgg tctttggaac
      181 acatggatac tagtcctatt gaaactaacg cactggttaa cgtagagatg caaccagagt
      241 atttcgacac accaatgaat gatgtagaga cacaacctac cagacgtagg aaaaagaagt
      301 ctactgtttg ggaacatttc actattgaaa acgtcggtgc aggagttaga agggctgttt
      361 gtaaggaatg ctttcaatca tttgcttata gtacgggttc gaaagttgct ggtacaagtc
      421 acctcaaacg tcacatcgct aaaggaggtt gccctgtttt tcttcataac caggaccaca
      481 acccgtcgac cccatttagt gcgccaacaa ataaggctgc taactctggg ggttccatca
      541 gtaatacacc taaacggcgt tacagaacgc cggctgtttc ttactcagat ttcgagcctg
      601 acaggtgtcg ccaagagatg gctcaaatga tcatacaaca tgactatcca cttcatatgg
      661 ctgaacacac tggattcatg gcgtttgtgc ataaccttca gccaaatttc aacatggtta
      721 acttcgatac ggttcaaggt gattgtgtgg ctacttatct tagtgaaaaa caaactatcc
      781 agaagctgat tgatggtatg ccgggtcgaa tttgccttac acttgaccta tggagctcct
      841 accatacaac gggctatgtt tttgttacgg gtcagttcat tgatagtgag tggaagatac
      901 acaaaaagct attgaatgtt gtgatggaac cgtatcccga atcagattcg gctttcagcc
      961 atgcggtatc gacctgtttg tctgattgga acatggaggg aaggttattt tcgctcacaa
     1021 ttaatcagcc tttgagcgaa accgggatta atagtctcag aggtttactt tctgtgaaga
     1081 acccgaacat tcttgatggt cagctgttgc ttactaattg ctttgctcga tctttaagct
     1141 gcgttgctca agaagtactc aaatcgggtg aagaaacagt taagaaagtc agagactgcg
     1201 tgaagtatgt gaaaacatca gaatcgttag aggagaaatt tgttgcactt aagcaacaac
     1261 ttcaagtaat cagtactaaa actttatcgc ttgatgatca tactcaatgg aatacaactt
     1321 atgaaatgtt actagcagct tccgagttaa aagaagtgtt ttcttgctta gatactttag
     1381 accctgatta cagtaaaggg ccaaatggtg aagagtggaa attagtggac accctttgca
     1441 catatttgaa gctacttttt aatactgcaa gtctgcttac atcatcaact gtacccacag
     1501 ctaatacgtt ctttcatgaa gcatggaagc ttcaattgga actaacgcgt gcatctacaa
     1561 gtgaagatca gacaattagc atgttaacca agccgattca tgaaagtttt gataagtatt
     1621 ggaaaagctg ttgtttgatg ttatccatcg cagtggttat ggacccacgg ttcaagatga
     1681 agctagttga gttcagtttc acaaagattt atggtgatga ggctgcatcg tttttaaaga
     1741 ttgtcgatga agggattcac gagctttttc tagagtacgt tgcacttcca ttgcaactca
     1801 cgcctgcttt tgtcgatgta gtaaatggtg aatcgggaga tgtgaaacaa gatgatgatg
     1861 gtagaggact gaataacggg ttggggctta cggattttga tgtttatata atggaaagta
     1921 caagtcaaca gtcaaagtca gagctggatc agtatttgga tgagtctctt ttgcctagga
     1981 gtcatgagtt tgatgttatg aaatggtgga aactgcacaa ggttaagtac ccgacgttat
     2041 caaagatggc tcatgatata ttgacggctc ctgtgtcgac tgtttttggt gatgcggttt
     2101 ttgatacggg tgctaaagag atggatcgtt atagatgttc gttgaggcct gatactgtag
     2161 aagcactttt ctgtgctaag gactggatgc ataatgaacc tgtggagact gatgactctg
     2221 ttgtgaagat ggagtttcct atttagtttt cagtttggta ctaaaaaaag gtcgtgttta
     2281 tgtttagagt ttgttgattt gtgcatgatt aggttcgagt agaggagtat gagtttagtt
     2341 gtattttcac tattgcatac ttgggttgtt gcacccttga catttgtgat ttggattatt
     2401 attattatta ttaagctaat tgattctta
//
LOCUS       XM_071886139            1164 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904203), mRNA.
ACCESSION   XM_071886139
VERSION     XM_071886139.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1164
                     /gene="LOC139904203"
                     /note="uncharacterized LOC139904203; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139904203"
     CDS             1..1164
                     /gene="LOC139904203"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742240.1"
                     /db_xref="GeneID:139904203"
                     /translation="MGMFFSDSFRSLSLNTDHNPASNPIHHFITTTSPSFPNQDDEDD
                     DEEQEELDLNLSGNINSMINNDKIRPTKSCARGHWRPAEDAKLKELVSLYGPQNWNLI
                     AEKLDGRSGKSCRLRWFNQLDPRINRKAFSDEEEERLMSAHRMYGNKWALIARLFPGR
                     TDNAVKNHWHVIMARKYREQSNAHRKRRMLMTTQNTQQLQTHGSRSDTASGTPPPPPP
                     PMLISTDAPPPPFNAMFPHQPLFGLVSGVKNKHNMMMMMDIFSNKNTCWDKLSSSSTT
                     SSTSWMMGTNCTTSSTNFYDQHQHGVPFMMMTSTINHHHPYYHQHQHHHHDVYNSSSS
                     SFSSGADNSTISTTLSSVSAVTPSPQVYQSQQFSEANIDISPPLIDFLGVGAT"
     misc_feature    226..>555
                     /gene="LOC139904203"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03091"
                     /db_xref="CDD:215570"
ORIGIN      
        1 atgggcatgt ttttttcaga ctcttttcgt tctctttctt taaacactga tcataaccca
       61 gcttcaaacc ctattcatca tttcatcact actacttcac cttcatttcc aaaccaagat
      121 gatgaagatg atgatgaaga acaagaagaa cttgacttaa atctcagtgg caatattaat
      181 agcatgatta ataatgacaa aatcagaccc actaaatcat gtgctagagg tcattggaga
      241 ccagctgaag atgctaaact taaagaactt gtttcccttt atggtcctca aaattggaac
      301 ctcattgctg aaaaacttga tggaagatca gggaagagtt gtaggttgag atggtttaac
      361 caattggatc caagaatcaa cagaaaagca tttagtgatg aagaagaaga gaggttgatg
      421 agtgctcata gaatgtacgg aaacaaatgg gcgttgattg caagactatt tccaggtaga
      481 actgataacg ccgtcaagaa tcattggcat gttatcatgg ctagaaaata tagagaacaa
      541 tcaaatgctc atagaaaaag aagaatgctg atgactactc aaaatactca acaacttcaa
      601 actcatggtt ccagatcaga caccgcctcc ggcacaccac caccaccacc accgccgatg
      661 ttaatctcca ccgatgctcc gccgccacct ttcaatgcaa tgtttcctca tcaaccactg
      721 tttggtctag tctccggtgt gaagaacaag cataatatga tgatgatgat ggacatcttc
      781 agtaacaaaa acacatgttg ggataagtta tcatcatcat caacaacatc cagcacatca
      841 tggatgatgg gaacaaattg tactacatct tctacaaatt tttatgatca acatcaacat
      901 ggagtaccat tcatgatgat gacatctacc ataaaccatc atcatccata ctaccatcaa
      961 catcaacatc atcatcatga tgtctacaac agtagtagca gctccttctc atcgggtgca
     1021 gataattcca caattagtac taccctttca tcagtatcag cagtaacacc atcaccacaa
     1081 gtttatcaaa gccagcagtt ttctgaggct aatattgaca tttcaccacc acttattgac
     1141 ttccttggag ttggagccac ttga
//
LOCUS       XM_071886140            1965 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides long chain base biosynthesis
            protein 1 (LOC139904204), mRNA.
ACCESSION   XM_071886140
VERSION     XM_071886140.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1965
                     /gene="LOC139904204"
                     /note="long chain base biosynthesis protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139904204"
     CDS             248..1720
                     /gene="LOC139904204"
                     /codon_start=1
                     /product="long chain base biosynthesis protein 1"
                     /protein_id="XP_071742241.1"
                     /db_xref="GeneID:139904204"
                     /translation="MELSNNIVTAFMDYIKNASDWKTFAYDTPFARAVVFGVPIGGHL
                     FLEGLLVVVIMILLSQKSYKPPKRPLTNQEINELCDEWVPESLIPPIEEEMKKEPPIL
                     ESAAGPHTTINGKEVVNFTSANYLGLMGHEKLLESCNSAIDKYGVGSCGPRGFYGTID
                     VHLDCEARIAKFLGTPESIVYSYGLSTMFSIIPAFSKKGDIIIADEGVHWSIQNGLHL
                     SRSRIVYFKHNNMESLRRTLEEVTRRDKRVEKLRRYIVVESVYQNSGQIAPLDEIIKL
                     KEEYKFRVLLDESNSFGVLGRSGRGLTEHYNVPIDKVDIITAAMGHALASEGGFCTGS
                     NQVVDHQRLSSSGYVFSASQPPYLASAAITAIDLIEDNPQLLTRLRNNIKTLFTGLSG
                     IQGLQITSDVLSPLVFLVLKKSTGSLKSDLWLLEDFADRVLKEHSVFVVASKRSTLDK
                     CNLPVGIRLFVSAAHTESDMLKACESLKSVAASVFTGQNY"
     misc_feature    269..1708
                     /gene="LOC139904204"
                     /note="serine palmitoyltransferase; Region: PLN02822"
                     /db_xref="CDD:178417"
     misc_feature    order(797..802,809..811,1019..1021,1106..1108,1115..1117,
                     1202..1204,1211..1213)
                     /gene="LOC139904204"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:99747"
     misc_feature    1211..1213
                     /gene="LOC139904204"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99747"
ORIGIN      
        1 tctcttctac atctggtcca tatctccccc cataaaaacc agttgtcatc acccaaacgt
       61 tcaacatcct agaaccggac caccatcacc gtcgcgctag ttatcgatcg ccggcaccga
      121 tccgcttgat ccagtcacat accgccacca gtcgtcaaac tacttaccgt cgaaagtggt
      181 gaacaacccc taccatcatc cccgtcgcaa gccccccaaa gtgtatttgc taagtccgta
      241 tagcgaaatg gagctatcaa acaacattgt tacagcattc atggattata taaaaaatgc
      301 atctgattgg aagacatttg catacgatac ccctttcgct cgagctgttg tttttggagt
      361 acccattgga ggacatctgt ttcttgaagg tctacttgtc gtggttatta tgattttact
      421 ctctcaaaag agttacaagc cacctaaacg ccctttaaca aatcaggaaa taaacgagct
      481 atgtgatgaa tgggtacctg aatctcttat cccacctata gaggaggaga tgaaaaagga
      541 acctccaata ctcgagagtg ctgcaggacc acatacgaca attaacggaa aagaagtcgt
      601 gaattttaca tcagcgaatt acctaggatt aatgggacat gagaagttac tcgaatcatg
      661 caactctgct attgataagt atggtgttgg ttcttgtggt ccacgtggat tttacggaac
      721 aattgatgtt catcttgact gtgaagccag aatagcaaag tttttgggaa ctcctgaatc
      781 tatagtctat tcttacggtc tttcaactat gttcagtata attccagcat ttagcaagaa
      841 aggagatatc attattgcag atgaaggtgt tcactggagc atacaaaatg ggctacacct
      901 gtcaagaagt agaattgtat attttaagca caacaacatg gagtctctaa gacgtacgtt
      961 agaggaagtc acacgacgtg acaagcgagt cgagaagttg agacgctaca tcgtggttga
     1021 atctgtatac cagaattcgg gtcaaattgc cccgctagac gagataatta aactgaagga
     1081 agagtacaag ttccgtgttc tgttagatga aagcaactct tttggggtgc ttggaagatc
     1141 gggtcgaggt ctaaccgaac actacaatgt tcctatcgat aaggttgata ttataactgc
     1201 tgctatggga catgcgttgg cctcagaagg tggattctgc accggaagta atcaagttgt
     1261 cgatcaccaa cggcttagta gctcgggata tgttttttcg gcgtctcagc caccatactt
     1321 agcaagtgct gctattactg ccattgatct catagaggac aacccacaac tattaacgag
     1381 gctaaggaat aatatcaaaa cattatttac aggattgtcg ggaatacagg ggcttcaaat
     1441 tactagcgat gtgctatcac ctcttgtgtt cctcgttcta aagaaatcca cagggtcctt
     1501 aaagtctgat ctttggttgc ttgaagattt tgctgatcgt gtacttaagg aacactctgt
     1561 tttcgtggtg gcttctaaaa gatcaacact tgataaatgc aatctgcctg tgggtatcag
     1621 attgtttgta tcagctgcgc atacggaatc tgatatgctg aaagcttgtg aatcgctcaa
     1681 gagcgttgca gcttcggtgt ttacgggtca aaattattag atactaaatg ctatccaaca
     1741 cattactgaa agaaacgtac cgacgaaaga agtaaaaatc catctttttt cgggggagca
     1801 aatctgtagt ttctgggata atttactgta cgattcttaa ttactgtaat atttagtgga
     1861 ttttcttttg attttgaata atagcagaaa attatcattt ttttattcgt gtttattaaa
     1921 gtgttaagaa ttcagatact tgaatttatt ctggaaaata gttca
//
LOCUS       XR_011778701            1790 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904205), transcript variant X1, ncRNA.
ACCESSION   XR_011778701
VERSION     XR_011778701.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1790
                     /gene="LOC139904205"
                     /note="uncharacterized LOC139904205; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904205"
     ncRNA           1..1790
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904205"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904205"
ORIGIN      
        1 gtttgttaat gatgaaattt tttgtattta gatgtcacat atgtattgtt gattttgact
       61 tgtgaaaaga cgtttctttt ttcattgtta gggttaatat attgtttggt ttatgttgag
      121 aatcggagct aaaagatata ataaggttcg atttaaactg ttgtaggtat tataaatgat
      181 ctgtaaatac atgaaagtta taagaaaaag cttattgcta ctttggtttg tggttaaaaa
      241 tagctgttgt ggtttcatca atttagccaa tttgtgttag ttatagtaat aactaacttt
      301 ttatgattga tatgttatgc tatggctatt ctaatcgatt ttaactattt ttggaaggat
      361 gtgttgggta aagatatgtc attgactaat ttgagctatg gatgatatcc aattatacat
      421 atcctctaga gagatttgga gggtgcatta tgaaagtcaa gtgaagcaaa tgctgcactt
      481 agatttggag ggtgtagtac aatagccaat tgaagcaaaa tctcttatct gttatgagtt
      541 ttgcatgttg agctctcaat cccacaactg catttatttg atgattgagt gcctgtgaaa
      601 agttaacata tataccttta tacaagaaca tgttatgagg ttagtaggaa aacataataa
      661 agtattatta ttattattac tactattgga gttatgtttt gtacattagg ttgtattggc
      721 atatgttgat aaaaccacaa ccggcacgct cctcttggac taaatgattg atttcctact
      781 ggaatagaag ctgatgctac tgatatgtta attaggtgtt cacactattt atttataaaa
      841 ctattaagta aacatttttt ctttacaaaa caagttctag ctagtttgta agtttcggct
      901 gccactcttg aacgtttcgt atgtgtaatg ttaggttatt caggtggctt aacaacattg
      961 atacaaaatc catttaataa tttttccttt aaccattttc gagaaaacct tacaggtcca
     1021 tttaataatt tacacttcaa tcctatgttt atttttctgt ctaaattatg ttaaccttag
     1081 ctcttatatt atatttcctc atcgttaaac gacactacaa gtcatttttt catgactgga
     1141 tgtcggatag agacttttaa ggggaggttt taatgttgat gttggtaagt ttcttattct
     1201 gctctaatat atattttaca gagtataatc tgagattcaa gtaaatttta gtggcattta
     1261 taaatgcctt ttgttgtcag ttaaactttg atttcaatta accgtatatt atgttcattg
     1321 cagtgaggaa gctagtaaac atttataaat attgtggagg tattttatgc actaatgtgg
     1381 tggttctggt ggagctccat tacaacagaa tagtttgtcg gtattgtaac tttaaggaaa
     1441 aagatgtaaa ggagttcctt tgctcatatc tctatgttat gcaacttgaa cacttatggg
     1501 catgacaatg gcatagtatt catgggcatg acaatgacat agtattcttc tgtatgcttc
     1561 atctttgtag taacatcttt gaaaaaatag catttgaggc aaattgggcg gatatttact
     1621 aattcacttt ttgttgtcta ttgttgaatc aagttattgt tgaaatgcct atgtaaagaa
     1681 ggagccaaac ttgatgtatc taaataggta catatagatg ttgtaattga tagtattcac
     1741 gattcccgca ttctattgtt atgaaatccc gatgaggttc aatggggtca
//
LOCUS       XR_011778702            1572 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904205), transcript variant X2, ncRNA.
ACCESSION   XR_011778702
VERSION     XR_011778702.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1572
                     /gene="LOC139904205"
                     /note="uncharacterized LOC139904205; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904205"
     ncRNA           1..1572
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904205"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904205"
ORIGIN      
        1 gtaaaaagtt tctcttcaat aaaccacgaa ccctaaaatc attggtgacc attcaacctg
       61 gaaaaaactc cacgcagcag cttctttcat ctgatccatc atatttatct tctttaatct
      121 tcattattct agattcaagg atgtgttggg taaagatatg tcattgacta atttgagcta
      181 tggatgatat ccaattatac atatcctcta gagagatttg gagggtgcat tatgaaagtc
      241 aagtgaagca aatgctgcac ttagatttgg agggtgtagt acaatagcca attgaagcaa
      301 aatctcttat ctgttatgag ttttgcatgt tgagctctca atcccacaac tgcatttatt
      361 tgatgattga gtgcctgtga aaagttaaca tatatacctt tatacaagaa catgttatga
      421 ggttagtagg aaaacataat aaagtattat tattattatt actactattg gagttatgtt
      481 ttgtacatta ggttgtattg gcatatgttg ataaaaccac aaccggcacg ctcctcttgg
      541 actaaatgat tgatttccta ctggaataga agctgatgct actgatatgt taattaggtg
      601 ttcacactat ttatttataa aactattaag taaacatttt ttctttacaa aacaagttct
      661 agctagtttg taagtttcgg ctgccactct tgaacgtttc gtatgtgtaa tgttaggtta
      721 ttcaggtggc ttaacaacat tgatacaaaa tccatttaat aatttttcct ttaaccattt
      781 tcgagaaaac cttacaggtc catttaataa tttacacttc aatcctatgt ttatttttct
      841 gtctaaatta tgttaacctt agctcttata ttatatttcc tcatcgttaa acgacactac
      901 aagtcatttt ttcatgactg gatgtcggat agagactttt aaggggaggt tttaatgttg
      961 atgttggtaa gtttcttatt ctgctctaat atatatttta cagagtataa tctgagattc
     1021 aagtaaattt tagtggcatt tataaatgcc ttttgttgtc agttaaactt tgatttcaat
     1081 taaccgtata ttatgttcat tgcagtgagg aagctagtaa acatttataa atattgtgga
     1141 ggtattttat gcactaatgt ggtggttctg gtggagctcc attacaacag aatagtttgt
     1201 cggtattgta actttaagga aaaagatgta aaggagttcc tttgctcata tctctatgtt
     1261 atgcaacttg aacacttatg ggcatgacaa tggcatagta ttcatgggca tgacaatgac
     1321 atagtattct tctgtatgct tcatctttgt agtaacatct ttgaaaaaat agcatttgag
     1381 gcaaattggg cggatattta ctaattcact ttttgttgtc tattgttgaa tcaagttatt
     1441 gttgaaatgc ctatgtaaag aaggagccaa acttgatgta tctaaatagg tacatataga
     1501 tgttgtaatt gatagtattc acgattcccg cattctattg ttatgaaatc ccgatgaggt
     1561 tcaatggggt ca
//
LOCUS       XM_071886141            1003 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904206), mRNA.
ACCESSION   XM_071886141
VERSION     XM_071886141.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1003
                     /gene="LOC139904206"
                     /note="uncharacterized LOC139904206; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904206"
     CDS             111..845
                     /gene="LOC139904206"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742242.1"
                     /db_xref="GeneID:139904206"
                     /translation="MNDAIDTIIRKYETMEENGEFLPPCVEAALNLGCVPVKSSRSQR
                     NSNTINYLSPRNEDSGPNVQKPNFVDRTSTISEANKDIRPNLIVNPPGPSFYPPTFEN
                     LPRQMMSFENRPSSLYPLYQGFQFQPRAPQIGFQSIHQNSNKIIVRTPVFQAAREPLP
                     PFSQTGCHERLFLFDSKEDNSSKKEIQPKLAECDLSLRLGPVVSDRNHDVDDLDPRSR
                     EFSFFPLNSEAEKVDHTVKDDRKRKQ"
ORIGIN      
        1 aaaagctata cggtttaaaa tatatatttt ttatttttaa tattcaagtc atgttattgt
       61 ggcactacaa ttaggcagaa tacataaacc ccgaaacgtt gtgggatcgt atgaatgatg
      121 ccattgacac cataatcagg aaatatgaga ccatggagga aaatggtgaa ttcttgcccc
      181 cttgtgttga agctgccctt aatttgggat gtgttcctgt taaatcatca agaagtcaaa
      241 gaaatagcaa caccataaac tacctaagcc caagaaacga agattctggc ccaaatgttc
      301 agaaaccgaa ttttgtcgat cgaacaagta caatttccga agctaataag gatatcaggc
      361 cgaatttaat agtaaaccct cccggtcctt cgttttatcc gcccacattt gaaaatttgc
      421 ctagacaaat gatgtccttt gagaatagac cttcttcgct ttatccatta tatcaaggtt
      481 tccaatttca acctcgagca cctcagattg gatttcaaag tattcaccaa aattcaaaca
      541 aaataattgt tcgcacacca gtttttcagg ctgcccgtga gcctttgcca ccgttttctc
      601 aaacaggttg tcatgaaaga ttatttttat tcgatagtaa agaagacaat agttcaaaga
      661 aagaaattca acccaaattg gcggaatgcg atttgtctct aaggttgggt cctgttgtga
      721 gcgatcgaaa ccacgatgtt gatgacttag atccaagaag cagggaattt tctttctttc
      781 ctctgaattc agaggctgaa aaagttgacc atacggtcaa agatgatagg aaacgaaaac
      841 agtaggtgaa tcgcagcagt ttttgcattt gaatccagat tttgaacgaa tgaaacgacg
      901 agctttgtag atattattaa aatttatcct gttttctttt gctattgttc tttgagataa
      961 aatgaaatga gaaagaagtt ttcgtagttt gtttactttt caa
//
LOCUS       XM_071886142             958 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides blue copper protein 1a-like
            (LOC139904207), mRNA.
ACCESSION   XM_071886142
VERSION     XM_071886142.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..958
                     /gene="LOC139904207"
                     /note="blue copper protein 1a-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139904207"
     CDS             102..851
                     /gene="LOC139904207"
                     /codon_start=1
                     /product="blue copper protein 1a-like"
                     /protein_id="XP_071742243.1"
                     /db_xref="GeneID:139904207"
                     /translation="MTGLKSSSMVVFMVMMVAAMQMQSSMAQTRHVVGGPLGWTIPSN
                     GPAAYSTWASQQTFRVGDVLVFNFTTGNHNVAEVSQAAYGPCTSTNPISMTTTGPASI
                     TLTTAGTHYYICTVGGHCQIGQKLTVNVVGAATAPTTPPAAAPTTPPPTAAPTPTPTP
                     VSPPTVTPTPSPAPSTTTPTPSPTSSLAPSPEAASPPSPITSGPSPSGSTTPSPAGDT
                     TPTPPSPSAASRSFTTVVPAALMVAALVFFY"
     misc_feature    186..491
                     /gene="LOC139904207"
                     /note="Stellacyanin is a subclass of phytocyanins, a plant
                     type I copper protein; Region: Stellacyanin; cd13920"
                     /db_xref="CDD:259987"
     polyA_site      958
                     /gene="LOC139904207"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gagagagaga gagagagaga gagagaacat tacatatatt ctagagagaa aaaaaagggg
       61 gggcgacctg ataaaaatat attttcaaga acacaaaaaa catgacagga ttaaagtcaa
      121 gtagtatggt tgtgtttatg gtcatgatgg ttgcagccat gcagatgcaa agctctatgg
      181 ctcaaactag acatgtggtc ggaggaccct tgggctggac cattccttct aacggtccag
      241 ccgcttacag cacatgggct tctcaacaaa ccttcagggt tggtgacgtt cttgttttta
      301 acttcaccac cggtaaccac aatgtggcgg aagtttcaca agcggcgtac ggtccttgca
      361 cgagcactaa ccctatctcc atgaccacaa ctggacccgc ctccatcact ttaaccacgg
      421 ccggcaccca ctactacata tgtactgtcg gaggacattg tcaaattggt caaaaattaa
      481 ctgtcaacgt tgtcggcgca gccacagcac ccaccactcc accagccgct gcccccacca
      541 ccccacctcc tactgccgcc cccaccccaa ctccaacacc agtatcaccg ccaaccgtca
      601 ccccaacacc ttcccctgcc ccatccacca ctaccccaac accatcaccc acttcatctc
      661 ttgcaccatc gccggaagcc gccagcccac cgtcaccgat cacgtctggc ccatctccgt
      721 caggtagtac cactccatct cccgcaggag acaccactcc tactccacca tcacccagtg
      781 ccgccagcag atctttcacc accgttgttc cggctgcact tatggtggca gctttagttt
      841 tcttttacta gttaattaat ataatattaa tcttgttaat tattttttca tgattattat
      901 tagttggaga gataattacg tggttgtgag tgattgattt ctacaggatt tgttttca
//
LOCUS       XM_071886143             955 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uclacyanin 1-like
            (LOC139904208), mRNA.
ACCESSION   XM_071886143
VERSION     XM_071886143.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..955
                     /gene="LOC139904208"
                     /note="uclacyanin 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139904208"
     CDS             60..782
                     /gene="LOC139904208"
                     /codon_start=1
                     /product="uclacyanin 1-like"
                     /protein_id="XP_071742244.1"
                     /db_xref="GeneID:139904208"
                     /translation="MSTFKSNMMILMTLMLVSMHCYNTVAQTTHTVGASLGWTIPPNG
                     PSDYVTWASGQTFSVGDVLLFNFTTGAHTVAEVSQAAYGPCTTTNPISVTTTGPARLT
                     LNAPGTHYYICTVVGHCQTGQKLTINVRPATSATPAPAPAPTSTTNAPVASPTAAPTS
                     SPTTTPTPSTTVSPPASSPSPSQSDVSPPTSSTGQSPSGSTTPSPTGSTTLPPPSPSG
                     VGSSYAVAVPFTFLAAALAFFY"
     misc_feature    141..446
                     /gene="LOC139904208"
                     /note="Stellacyanin is a subclass of phytocyanins, a plant
                     type I copper protein; Region: Stellacyanin; cd13920"
                     /db_xref="CDD:259987"
     polyA_site      955
                     /gene="LOC139904208"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttccaatat catccttcaa tatttctctc tacaccttta tacgttcaat aacataaaga
       61 tgtcaacttt caaatccaac atgatgatcc ttatgaccct catgctagta tccatgcatt
      121 gttacaacac ggtggctcaa actactcaca cagtcggtgc tagtttagga tggaccattc
      181 ctccaaatgg tccatccgat tatgtcacct gggcatctgg tcaaaccttc tccgtcggcg
      241 atgttttact ctttaacttc acgacaggag cacataccgt cgcagaggtg tcacaagctg
      301 cgtacggccc atgcaccacc actaacccca tctcggttac aactaccgga cctgctagac
      361 tcacattaaa tgcacctggg acccactatt atatttgcac cgttgtaggt cattgtcaaa
      421 ctggtcaaaa gttgaccatc aatgtacgtc ccgcaacctc cgccacccct gctccagctc
      481 cagctccgac gtctacaacc aatgcaccgg ttgcttcacc aacagccgct ccaacgtcgt
      541 cacccacaac gactccaacc ccatctacca ctgtttcacc acccgcttca tcaccatcac
      601 cttctcaatc tgatgtcagc ccaccaacat catcaacggg tcaatctcct agcggtagta
      661 ccacaccttc tccaaccggt agcaccaccc taccaccacc gtcacctagt ggtgtaggtt
      721 catcatacgc ggttgcagta ccgtttactt tcttggcagc tgccttagct ttcttttact
      781 agatgctgtg aatgagttgt gtttacgtat tcttttttga tttttcgttt gaaacattct
      841 atattgtttg ctagattatt attttgtatt tacatgatga ttttatatta ttattattat
      901 tattataaca gttgttatgt tatatggagt atataataca ataattggtt tttta
//
LOCUS       XM_071886144            1370 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904209), mRNA.
ACCESSION   XM_071886144
VERSION     XM_071886144.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1370
                     /gene="LOC139904209"
                     /note="uncharacterized LOC139904209; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904209"
     CDS             69..1055
                     /gene="LOC139904209"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742245.1"
                     /db_xref="GeneID:139904209"
                     /translation="MGILDSNDEAVSMELPAPSGWKKTCLVKKEGTPKKNETVFTAPT
                     GEEITNRKQLEQYLKSHPGGPKISEFDWTSGQTPRRSTRISEKVKSTPPPSETESPKK
                     RSRKSSSSKKEKEDVEMQDAEKVKNVDEVPPSEEVGEPVIVVKEVNEEVSEIPKVPLE
                     EASKSVYMANKELGMSNHNEEKTCPAKGVNEEVSEIPKVPLEEASKSVNIANEELGES
                     NNCEEKTCPVEGVNEEVREIPKVPLEEAAKSVNMADEELGESNNGEEKTCPAKGVNEE
                     VLENPVTPPPDEVTKPISEETVHVTKVEGSENCSQVADVSEAEPSWEEIKIE"
     misc_feature    114..317
                     /gene="LOC139904209"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; Region: MBD;
                     cl00110"
                     /db_xref="CDD:469618"
     misc_feature    order(138..140,144..146,150..152,171..173,177..179,
                     204..206,213..215,225..227)
                     /gene="LOC139904209"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     polyA_site      1370
                     /gene="LOC139904209"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attttagaga ccaaaaatcc gggtagcaaa atccaagacg aagaacatct agggtttttt
       61 gttctacaat ggggattttg gattcgaacg atgaagctgt ttccatggag ctacctgcac
      121 cttcaggctg gaagaaaacg tgtttggtaa agaaagaagg gacaccaaag aagaatgaaa
      181 ccgtgttcac tgcaccaaca ggggaagaga tcaccaacag gaagcagctg gaacagtacc
      241 taaaatcaca ccctggtggg cccaagatct cagagtttga ttggacaagc ggccagacgc
      301 cacgaaggtc aacaaggatc agtgagaaag taaagtcgac cccaccaccg tcagaaaccg
      361 agtctccaaa aaaacgctcc agaaagtcat cgtcttcaaa gaaagagaaa gaagatgtag
      421 aaatgcaaga tgccgaaaag gttaagaacg ttgatgaggt accgccatca gaggaagtag
      481 gcgagccagt aattgtagtc aaagaggtca atgaagaagt gagtgaaatc ccaaaagtac
      541 ccttggagga agctagtaag tcagtttata tggccaacaa ggaactgggc atgtcaaacc
      601 acaatgagga aaaaacttgc cctgcaaaag gggtcaatga agaagtgagt gaaattccaa
      661 aagtaccctt ggaggaagct agtaagtcag ttaatatagc caacgaagaa ctgggcgagt
      721 caaacaactg tgaggaaaaa acttgccctg tggaaggcgt caatgaagaa gtgcgtgaaa
      781 tcccaaaagt acccttggaa gaagctgcta agtcggttaa tatggccgat gaggaactgg
      841 gcgagtcaaa caacggtgag gaaaaaactt gccctgcgaa aggagtcaat gaagaagtgc
      901 ttgaaaaccc cgtaacgccc ccaccagatg aagtaacgaa gcctataagt gaagagactg
      961 ttcatgtgac taaagtggaa ggatctgaga attgtagcca ggtggcggat gtcagtgagg
     1021 ccgaaccttc gtgggaggag ataaagatag agtaagagat ggggcttatt tctggtgact
     1081 ttttggtaat ggccatgtta gtactatgta gtttgtagtt tgtagtttgt tgtctgttgt
     1141 tataggatta gtagtctaga aaacttgact ttaattagcc gtctgtgaga tatttgttgt
     1201 tgtaagttca acatgaagtc tatcgttttg tgagcattat gtctgcagag agatttatat
     1261 tacagggtgc atctccagtt tgtaacatta ccatgtaata ggcaactctt taatcacctc
     1321 caactcttgc agtttataaa cttacagtta tgtcgtaatt agttttacta
//
LOCUS       XR_011778703             916 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904210), ncRNA.
ACCESSION   XR_011778703
VERSION     XR_011778703.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..916
                     /gene="LOC139904210"
                     /note="uncharacterized LOC139904210; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904210"
     ncRNA           1..916
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904210"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904210"
ORIGIN      
        1 tcttttatat ttagaaatta atatattcaa ataaaaataa ttgcatactt tcggatttct
       61 tgtaaaagag attagcggca tcacaaaaat catgacctct caaatcaaat acgcgatttg
      121 agaaaccaaa tacatcaaag aaaccaaaat ctatttcatc cacccacaaa tcggatacgc
      181 gaaatcatac tggaattagg agcaaggatt acaacccatt tgcccggaag aacagataat
      241 gagtcaagaa tttctggagt agcaagcaga aaaaagattg gctcgagttc ttcattcgcc
      301 cttgcggtca tcgaaaatga aacaattatt tattgtacaa aatttattac agtggtaaaa
      361 aagatcaaac aaaagtgtca cacattgatt taaagctatc cgtttatagg aaggtgatgg
      421 ttctacaaat tgagcgagta aaaggaatat ctcttgacaa gatcatgtgg ctttaagtgc
      481 atgatgtatg aaactatgat tatcgcttat aattagattg atcctttgaa aggttaaaag
      541 gaaagtttat gtgcataaag tttatgaatt ctgatgcggt ttgttgtcac ttaattgtat
      601 gttagattga ctacttaaat agtttgtgtc atcagtggtc attgggtatt ggtcgttaag
      661 gaaggttcat ccgagtcagg ttcaacgagc agttcactag aaagtcatca aagtttgaat
      721 tttgatccac atacggggga attcaaggat tattatgagc gataagtaga tcattgtggc
      781 tagagcactt agcaactact atggcaaaag gagttagcaa ccacacaata catatgttga
      841 atggattgtt atttacgaaa gaggaatcat attgcttata aagtattcat tattgagtgc
      901 caacattgat tgcact
//
LOCUS       XM_071886145             618 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides axial regulator YABBY 5-like
            (LOC139904211), mRNA.
ACCESSION   XM_071886145
VERSION     XM_071886145.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..618
                     /gene="LOC139904211"
                     /note="axial regulator YABBY 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904211"
     CDS             193..618
                     /gene="LOC139904211"
                     /codon_start=1
                     /product="axial regulator YABBY 5-like"
                     /protein_id="XP_071742246.1"
                     /db_xref="GeneID:139904211"
                     /translation="MSSIDVAAAAAAAASEQLCYIPCNFCNIVLAVSVPCSSLLDIVT
                     VRCGHCTNLWSVNMGMAAAFHHSFSNSNSTSIDSTSHQKAPTHTPPNYRVDFGASSKY
                     KNRMPIMRPSPVCISNDQIISRPPEKRQRVPSAYNLFIK"
     misc_feature    235..>615
                     /gene="LOC139904211"
                     /note="YABBY protein; Region: YABBY; pfam04690"
                     /db_xref="CDD:461393"
ORIGIN      
        1 cttctctttc cctctataca tacatatcat atacagtact ccgtatctat atatgtttgt
       61 ttatctcgat ctctttttta tccataaata gaaaggactt gaaataaaca aattacacgt
      121 actacttact gtagtcatcg atcaccccca acttcaacac aaagattatt atcttggatc
      181 atcaagaaag agatgtcaag catagatgta gctgctgctg cagcagcagc agcatctgag
      241 caactgtgtt atatcccttg taacttttgc aatattgttc ttgcggtgag tgtaccatgc
      301 agcagtttgc ttgacatagt tacagttaga tgtggacact gcaccaatct ttggtctgtg
      361 aatatgggca tggctgctgc ctttcatcac tctttctcaa attccaattc cacctccatt
      421 gattctactt ctcatcagaa agctccaacc cacactcctc caaattatag ggttgacttt
      481 ggtgcctctt caaagtacaa aaatagaatg ccgatcatga ggccatctcc ggtttgcatc
      541 tcaaatgatc aaataatcag tcgccctcca gagaagcggc aacgagttcc ttccgcatac
      601 aacctgttca taaagtaa
//
LOCUS       XR_011778704             192 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904212), ncRNA.
ACCESSION   XR_011778704
VERSION     XR_011778704.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..192
                     /gene="LOC139904212"
                     /note="uncharacterized LOC139904212; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904212"
     ncRNA           1..192
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904212"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904212"
ORIGIN      
        1 agaggagatc caaaggatta aggcaagtaa tccagatatc tgtcataggg aagcttttag
       61 tgctgctgca aaaaattggg cacatttccc tcgtattcac tttggattga agttggaagc
      121 gaacaatcac caaactaaac ttgatcaggg atctgagaag agactaaggt agcattattc
      181 aggaattgaa tt
//
LOCUS       XM_071886146            1416 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides equilibrative nucleotide
            transporter 8-like (LOC139904213), mRNA.
ACCESSION   XM_071886146
VERSION     XM_071886146.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1416
                     /gene="LOC139904213"
                     /note="equilibrative nucleotide transporter 8-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139904213"
     CDS             10..1200
                     /gene="LOC139904213"
                     /codon_start=1
                     /product="equilibrative nucleotide transporter 8-like"
                     /protein_id="XP_071742247.1"
                     /db_xref="GeneID:139904213"
                     /translation="MESLKNNQNQIEPKDIYKIAYIIHFLLGAGNLLPWNALITAIDY
                     FGQLYPDKHVEKVFSVAYMSSSLIVLIIMIRWTNFSKVVTFQVRMNIGFTMFIVSLMV
                     TPTIDWAWRGISKAKCSSTFYTVVASVVICGLADGLIGGSLVGSAGKLPKEYMQAVFA
                     GTASSGILVCLLRIVTKASLPHDPQGLKKSAHLYFLVSTLILLVCMVCCTLLYKLPVM
                     EQHYKALQQNHSTSRTKLWDVARKIQWPALGIFIIYTVTLSIFPGFLTENIESVLLKD
                     WYPIMLITTYNIADFVGKSFTAIYVLESIGKATWGCAGRLLLYPLFTACLHGPIWLKN
                     EVFVVFLTIILGLTNGYLTSVIMIMAPKSVAPSEAEMAAVVMALFLGLGLVSGSVLGW
                     FWII"
     misc_feature    82..1191
                     /gene="LOC139904213"
                     /note="Nucleoside transporter; Region: Nucleoside_tran;
                     cl15430"
                     /db_xref="CDD:472807"
ORIGIN      
        1 gatcccaaaa tggagagctt aaaaaacaac caaaatcaaa ttgaaccaaa agacatttac
       61 aaaatagcat atatcatcca ttttttactt ggagcaggca atttgcttcc ttggaatgct
      121 ttaattacag ctattgatta ctttggtcaa ctttatccgg ataaacatgt tgagaaagtt
      181 ttttcggtag cttatatgag ttcgtcactt atagtattaa ttataatgat aaggtggaca
      241 aatttcagta aagtagtcac ctttcaagtg aggatgaaca ttggcttcac aatgtttatc
      301 gtgtctctaa tggtaactcc aacaatcgac tgggcatggc ggggcatatc gaaggcaaag
      361 tgtagctcaa cgttttatac agtggttgca tccgttgtga tttgtggttt agccgatggc
      421 ttgattggag ggagccttgt aggatctgca ggaaaattac caaaagaata catgcaggct
      481 gtttttgctg gaacagcctc atcaggaatt ttggtctgtc tgttgcgaat tgtaacgaaa
      541 gcctcactcc cacatgatcc tcaagggctc aagaaaagtg cacacctata cttcctagtt
      601 agtacactaa ttttgctggt gtgcatggtt tgttgtaccc tgttgtacaa gttaccagtg
      661 atggaacaac attacaaagc actccaacaa aatcattcca cctcaagaac taaattatgg
      721 gatgttgcaa gaaaaattca atggcctgct ctaggaatat tcataatata taccgtaact
      781 ttatcaattt ttccgggatt cttaacagaa aacatagagt cggtactcct taaagattgg
      841 tacccgataa tgttgattac cacttataat attgctgatt ttgttggcaa atcttttact
      901 gcaatttatg ttttagagag tatcggtaag gctacatggg gttgtgcagg gaggttgttg
      961 ttatatccac tcttcacagc ctgcttacat ggaccgatat ggctcaagaa tgaggtgttt
     1021 gtggtatttc taactattat tttggggttg accaatgggt atctgacaag tgtcattatg
     1081 atcatggcgc ctaaatcagt agcaccttca gaagcagaaa tggctgcggt tgtgatggct
     1141 ctgttcctgg gattaggatt ggtttctggc tctgttcttg gctggttttg gatcatctga
     1201 aattattatg tagtgaatct atgtattttc tattgtgtcc tattctttag tgtacaatat
     1261 gaaaaaagaa ttattgattt tgaaccagct tcgatagtaa aaacggaaaa ggactagaat
     1321 gaaaagaaca cacaaatcca ccacccatca gtaatgcaac tagcaatcaa tcttattctg
     1381 cctacctgtc ataagcctgt gaatcaaagc agttgt
//
LOCUS       XM_071886147            2553 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides EIN3-binding F-box protein
            2-like (LOC139904215), mRNA.
ACCESSION   XM_071886147
VERSION     XM_071886147.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2553
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2553
                     /gene="LOC139904215"
                     /note="EIN3-binding F-box protein 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139904215"
     CDS             196..2064
                     /gene="LOC139904215"
                     /codon_start=1
                     /product="EIN3-binding F-box protein 2-like"
                     /protein_id="XP_071742248.1"
                     /db_xref="GeneID:139904215"
                     /translation="MPVLVNYRGDDDYHTGRSFCSKDSTRLLSFYEPPCKRQRINESY
                     FLFFEEEKKPSIDVLPDECLYEIFRRLSCGQARSASACVSNRWLTILSNIKNSEIENG
                     SSSDDIEMISQENDGFLTRCLEGKKATDNRLAAIAVGTSARGGLGKLSVRGSNKVTKS
                     GFTAIARGCPSLKVLSLWNVPLVGDEALIEIARECHSLEKLDLSHCPSISNKGLTAIA
                     ENCPNLSSLTIEFCKSIGNESLQAIARGCPNLQSITIKDCPSVGDQGVATLLSAPFSV
                     LKKVKLQSLNITDFSLAVIGHYGKSITNLTLMGLQTATQKGFWAMGNAKGLQSLASLS
                     IVACYGVTDLSLEAIGNGCCLLKQMLIKRCCFVSDKGLLSFIEAAESLECLQLEECNR
                     ISQHGILGALKSKLKSLMIVKCMGIKDLGQETHADLTHCGSLRSLTIKDCTGFGNMSL
                     SVVGTLCPRIQNLELSGLCQITDSDLFPLLENCNVGLVKVNLSNCVNLTDKIVVDLAR
                     IHGGTLKSLNLEGGRNITDESLVAIAETCVFLNDLDVSKCSITDNGLSRLSEGIQIGL
                     QVLSVSGCCKISNKSTPFLMKLGQTLVGLNIQRCNLISTSAVDSLVESLWRCDVLY"
     misc_feature    361..465
                     /gene="LOC139904215"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(370..375,379..387,394..399,406..408,442..450,
                     454..456,463..465)
                     /gene="LOC139904215"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438852"
     misc_feature    order(370..372,382..384,391..396,403..408,421..423,
                     427..432,442..450,454..456)
                     /gene="LOC139904215"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438852"
     misc_feature    <625..1068
                     /gene="LOC139904215"
                     /note="Antagonist of mitotic exit network protein 1;
                     Region: AMN1; cd09293"
                     /db_xref="CDD:187754"
     misc_feature    631..708
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    709..786
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    787..864
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    865..942
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    943..1038
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1039..1098
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1099..1182
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1183..1257
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1261..1338
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    <1474..2004
                     /gene="LOC139904215"
                     /note="Antagonist of mitotic exit network protein 1;
                     Region: AMN1; cd09293"
                     /db_xref="CDD:187754"
     misc_feature    1495..1572
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1573..1653
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1654..1734
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1735..1812
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1813..1878
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1891..1968
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1969..2040
                     /gene="LOC139904215"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 acccacaata gactacttta aacatctaaa aaatcttttc tttttttgcc ctgctactgg
       61 gttgtagagg gtttctttgt gaatgcaatt tgatctagat ttcatcaaaa gtttctgttt
      121 tttataatct tagtgtgttt ttttttgggt gaaagatctg atctttttgg tgggttatta
      181 caacaaatta caaagatgcc tgttttggtc aattataggg gggacgatga ttatcacacc
      241 ggtagatcat tctgctcaaa agattcgaca cgtttgcttt cgttctacga gcctccttgc
      301 aaacgtcaac gaatcaatga gtcatatttt ctcttctttg aagaagaaaa gaaaccatca
      361 attgatgtcc ttcctgatga atgtctttac gaaatcttta gacgcttgtc ttgtggtcaa
      421 gcccgaagtg catcggcttg tgtctctaac cgttggctta ccattttaag taacatcaag
      481 aactcagaga tcgaaaatgg atcatcatct gatgatattg agatgatctc tcaagaaaac
      541 gacgggtttc ttactcgatg tttagaagga aagaaagcga cagataaccg acttgcagcc
      601 attgcagtcg ggacgtctgc tcgtggtggt ttgggcaaac tttcggtcag gggaagtaat
      661 aaagttacca aatcagggtt caccgcaatt gcccgcggct gcccatcgct aaaggttctt
      721 tctttatgga atgtaccttt agtaggggac gaagctttaa tcgagatcgc tagagaatgc
      781 cattcattag aaaaactcga tctttctcat tgcccatcga tttccaacaa gggtttaact
      841 gcaatcgctg aaaactgccc gaatttgtct tctttgacaa tcgagttttg taaaagcatc
      901 ggaaacgaga gtctacaagc cattgcccga ggttgcccaa atcttcaatc tatcactatc
      961 aaagactgcc cgagtgttgg ggaccaagga gtcgcaacac tcttgtctgc accattttcg
     1021 gttttaaaga aagtaaagct ccaatcttta aacataactg acttttcact tgccgtaatt
     1081 gggcattacg ggaaatcgat taccaatctt acccttatgg gtcttcaaac tgctactcag
     1141 aaagggtttt gggctatggg taacgcgaaa ggtcttcaat cgttggcatc gttaagtatt
     1201 gttgcgtgtt acggggttac tgatttgagc cttgaagcga taggaaacgg gtgttgtttg
     1261 ttgaaacaaa tgttgattaa aaggtgttgt tttgtatccg ataaaggatt gttgtctttt
     1321 atcgaagcag ctgaatcact cgaatgtttg cagttggaag aatgcaaccg gatcagtcaa
     1381 cacgggatct tgggagcttt aaagtcaaag ctgaaatcgt taatgatagt caaatgtatg
     1441 ggaatcaaag atttgggtca agaaacacac gccgatttga cccattgtgg ttctcttcgt
     1501 tctttgacca ttaaagattg tactgggttt ggaaacatga gcttatcggt tgttggtaca
     1561 ttatgtcccc ggatacaaaa tcttgaacta agcggacttt gtcaaataac agattctgat
     1621 cttttcccgc ttcttgaaaa ctgtaatgtt ggacttgtga aagtcaactt aagcaactgt
     1681 gtaaacttga ctgataagat tgtggtggat cttgctagaa ttcatggcgg aaccctaaaa
     1741 agcttgaatc ttgaaggtgg caggaacatt actgatgaaa gtttagtcgc aattgctgaa
     1801 acctgcgtgt tccttaacga tcttgatgtt tcaaagtgta gtatcaccga taacggacta
     1861 tccagattgt ctgaagggat ccagattggt ttgcaagttc tttcggtatc aggttgttgc
     1921 aagatttcaa acaaaagtac gcctttttta atgaaacttg ggcaaacgtt agtcggatta
     1981 aacatccaac gatgcaatct catcagcact agtgcagtcg attcactagt cgagagtctt
     2041 tggaggtgtg atgtccttta ttaaactaca ataaagacat aaggaccgga tccgtggatc
     2101 tttggcctgt tggttggttt ttcctgtcaa aaacgggtcg cccgtttgcg actgttttag
     2161 tctcgtcaaa aaggcgagat tctttcaact gctggccttg gtgagacatg tccggtcgaa
     2221 gtgtctattc tgtttgtttt gggtctaggt tagtttagct tatggttcga gtcgtcagtt
     2281 gtatgggtca atatgggttc tgttgtgcag tttgagggtg aatgagggtg cacctggttt
     2341 ttgggctttg gaaaatggca acagggttgt ttctggtgcc atttaacaac acactgtgtg
     2401 tgttgttttt ttctgaacca tggtccatgt tttttgatag gattttaggg tcctgttttc
     2461 ccaggttaat cttcttgatg tacctcaaat tgtactctta ctagtgatcg taatgaagct
     2521 ttatgtttaa tgcaatataa gtctttgaat tta
//
LOCUS       XM_071886148             579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904217), mRNA.
ACCESSION   XM_071886148
VERSION     XM_071886148.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..579
                     /gene="LOC139904217"
                     /note="uncharacterized LOC139904217; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904217"
     CDS             27..398
                     /gene="LOC139904217"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742249.1"
                     /db_xref="GeneID:139904217"
                     /translation="MSRLYEGWNEILKIQKFRRAVGKTIFFSFSALISYAYNSNTTRA
                     GFSRGDQFYASYPAGSELLTDTTKLYKHALGNCFEVEDWGPIEWSIMAKHFERQGKSP
                     YAYHAQYQAHLASNGNLDGSG"
ORIGIN      
        1 ttcatttttt tgatcaattg tcaaagatga gtagacttta tgaagggtgg aatgaaattc
       61 taaagattca gaagtttcga agagccgttg gaaaaacaat cttcttttct ttttcggcgc
      121 tcattagcta cgcatacaac tccaatacga cgagagctgg gttctcaaga ggagatcaat
      181 tttatgcatc atatcctgca gggagtgagc tattgaccga tacaacgaag ttgtataaac
      241 atgcacttgg aaattgcttt gaagtggagg attgggggcc aattgaatgg tctataatgg
      301 ctaagcattt tgagcgtcaa gggaaatcgc catatgcata tcatgctcaa taccaagctc
      361 acctagcatc taatggaaat cttgatggaa gtggctaatg taaggataca atctataatc
      421 cagcatttgt ataagacaat gacggatatg tttaaactgg tcggtttgta ttctaagcta
      481 tatgcgtatc tcgataatcc tagaaatggt tcatcattat gaaactaatt actttaatag
      541 ttactgttaa tgaatacttt cattgaatct tagaacact
//
LOCUS       XM_071886150             844 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904218), mRNA.
ACCESSION   XM_071886150
VERSION     XM_071886150.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..844
                     /gene="LOC139904218"
                     /note="uncharacterized LOC139904218; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904218"
     CDS             184..618
                     /gene="LOC139904218"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742251.1"
                     /db_xref="GeneID:139904218"
                     /translation="MSSILPSNGMVLATAMAAVSGTVLLLAFHLQKPPPTTAGAVTAA
                     TQFSMIQQPRPCISSDRKKRGKKNKKVHFAEDVMEPSGNGEEFRKRLQSKNIVQNRTY
                     STDVKEEGTEMKVSKTFEGVPANRRALYSGILRDRGVYRMHH"
ORIGIN      
        1 tccttcacca ttcttaaatc atacacacac acacacacac atttatactt ccaaatttct
       61 tgatcgtcat catacaacaa aaaagttttc gtttcttctt atacccacaa aaaagtcttg
      121 attttttctc atacacaatt ctataagctt ctaactttgc catagaaaag gtcttttttc
      181 atcatgtcat caatcttgcc ttcaaatggg atggtgttag ccaccgccat ggcagccgtc
      241 tcaggcaccg tactccttct cgccttccac ctccagaaac caccacctac caccgccggc
      301 gccgtcaccg ctgccactca attctcgatg atccagcaac caagaccatg catctcttca
      361 gatcgaaaga agagagggaa aaagaacaag aaagtacact ttgcagagga tgtgatggaa
      421 ccaagtggaa acggagaaga gtttagaaaa agacttcaaa gtaaaaatat tgttcaaaac
      481 cggacttatt cgacagatgt aaaagaagaa gggactgaaa tgaaagtttc aaaaacgttc
      541 gagggtgttc cagcaaatag gagagctctc tactccggta ttctcagaga tcgtggtgtc
      601 tatagaatgc atcactagta aagtgctaaa tgagttaatt atcaggtgtg attagccctt
      661 tttttttgta aattgtttag tttgagtccc tcatctgtgg aggaagtaca aattgcactt
      721 tcttggattt ttatttgtat aactgtatct actgatattg gtgttgtacc ctcttgtaca
      781 aattgaaatg aacatgggat acttgtcggc caaatgtccc acttctattg actattcttg
      841 taat
//
LOCUS       XM_071886151            1201 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904219), mRNA.
ACCESSION   XM_071886151
VERSION     XM_071886151.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1201
                     /gene="LOC139904219"
                     /note="uncharacterized LOC139904219; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904219"
     CDS             129..1115
                     /gene="LOC139904219"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742252.1"
                     /db_xref="GeneID:139904219"
                     /translation="MIMFPTHYLSSSKYIHADFSQGGYDCFISLGKGFSDLMAEDESR
                     TQNDSLNNNNNNDDDNDDNATWLQLSLGGGHMQSTTSSSHGQPSVDLGLVPGGGGRSS
                     STNIQLPLPSPSPPRQLIFQVPEYRGTFPTSNTFFLQPAAAINSVPSMTLQQQQQSNY
                     TNYLQLVRPNTNNFPVNMMTLPVSSSSSFSGSSEQQHGRQHHVHRRLNVARVVNPPRR
                     PHSGVWFILQASHNQAKEPFLPQIPKSYLRIKDGRMTVGLLIKYLVNKLELESESQVE
                     ITCKGHQVLSTSTLQHVRDTIWNSPRNNIGLTLVPQSSATSNHLMVLNYGRI"
     misc_feature    792..1106
                     /gene="LOC139904219"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
ORIGIN      
        1 aattctttct atcttgatga ttaattaaac cctcaaaaca tttccaagtt ttccaaaact
       61 tgtcgtttta tatgtagtat ggctttcttt catatcatct tgaaaattca gttccaaaga
      121 ttcacaatat gatcatgttt cctactcatt atttatcatc ttcaaaatac attcatgccg
      181 atttttcaca aggtgggtat gactgtttta ttagtttagg aaaagggttt tcagatctaa
      241 tggccgaaga tgaatcaaga acccaaaacg acagtctcaa caacaacaac aacaacgatg
      301 atgataatga tgataatgcc acgtggcttc aattaagttt aggtggtggt cacatgcagt
      361 ccaccacaag tagtagccat ggtcaaccgt cagttgacct tggtctagtt ccaggtggtg
      421 gcggtcgtag ctcttctaca aacatacagt taccattacc atcaccatca ccgccacgtc
      481 agcttatatt tcaagtaccc gaatatcggg gtacttttcc gacatcaaat actttctttt
      541 tgcaaccagc ggctgctatt aattccgtgc catcaatgac tttacaacaa caacaacaaa
      601 gtaattatac taattattta caattggtta ggcctaatac taataatttt ccagttaaca
      661 tgatgacgct gccggtttct tcatcgtctt ctttttccgg ttcatcggaa caacaacacg
      721 gacgacagca tcatgttcac cgtcgattaa atgtagcaag agtggtcaac ccaccacgaa
      781 gaccacattc gggtgtttgg tttattcttc aagcttctca taaccaggcg aaggaaccat
      841 ttttgcctca aataccaaag agctacctaa gaatcaagga tggtaggatg actgttggat
      901 tattaatcaa gtatctggtt aataagcttg aactcgaaag cgaatcccag gtagagataa
      961 catgtaaagg acatcaagta ttgtcaacat cgacactaca acatgtaagg gatacgatat
     1021 ggaatagtcc gagaaataac attggattaa ctttggttcc tcaatcatca gcgacatcga
     1081 atcatttgat ggttctaaac tatggtagga tatgatcgat cacgatcaaa catttgttaa
     1141 ttattaaatt gtttcaatcc cacacccaca tgtgtttatg ttaagttatg ggcagttttt
     1201 a
//
LOCUS       XM_071886152            2982 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipase D alpha 1-like
            (LOC139904220), mRNA.
ACCESSION   XM_071886152
VERSION     XM_071886152.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2982
                     /gene="LOC139904220"
                     /note="phospholipase D alpha 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 43
                     Proteins"
                     /db_xref="GeneID:139904220"
     CDS             390..2798
                     /gene="LOC139904220"
                     /codon_start=1
                     /product="phospholipase D alpha 1-like"
                     /protein_id="XP_071742253.1"
                     /db_xref="GeneID:139904220"
                     /translation="MAQILLHGTLHATIYEVDKLKSNLIHKIVDGLEHAVGLKKNAVS
                     LYATIDLEKARVGRTRMLEHDTNPRWYESFHIYCAHMASNLIFTVKEDDPIGATTLGR
                     ASIPVTKLLNQEVFDEWVELVDDRGKHVHGHAKIHIKVQFFEVTRECQWSKGIQSPKF
                     PGVPFTFFPQRNGCKVTLYQDSHLPDNFTPKIPLTGGKLYEPHRCWEDIFDAISNAKH
                     LIYITGWSIYTEITLIRDLRRSKPGGDMTLGELLKKKASEGVRVLMLVWDDRTSGDLF
                     KNGFMATHDEDTGQYFKGSEVNCVLCPRNPDDGRSLVQNIEISVMLTHHQKVVVVDSG
                     LPNGNYEKRRIVSFIGGIDLCDGRYDTPFHSLFRTLDSVHHDDFHQPNFPNASIKKGG
                     PREPWHDIHCKLEGPIAWDVLYNFEQRWLKQGGKDLLNDVRDLDRIIIPPSPVMLPND
                     HESWNVQLFRSIDGGAAFGFPDKPEDAARAGLISGKDNIIDRSIQDGYINAIRRAKNF
                     IYIENQYFLGSSFGWNSNDIKDEDVKALHLIPKELSLKIVSKIEAGEDFRVYVVIPMW
                     PEGEPESASVQAILNWQHRTMQMMYTDIVHALKAKHIVANPKDYLTFFCLGNREVKKD
                     GEYIPSEKVEEGSNYSRAQEARRFMIYVHAKMMIVDDEYMIIGSANINQRSMDGARDS
                     EIAMGAFQPCHLTKRQPARGQVHGFRMSLWYEHLGLLDDCLSSPESLACIQKVNKISL
                     KYWDLFCSEKLDHDLPGHLLSYPIGVTADGEVTEVPGCTYFPDTNARVLGTLAAYLPP
                     MLTT"
     misc_feature    390..2795
                     /gene="LOC139904220"
                     /note="phospholipase D alpha; Region: PLN02270"
                     /db_xref="CDD:165912"
ORIGIN      
        1 aatgttatat attaagtatt tcattatttt attaatatga aaaaatattg agattgattg
       61 attttcgtac acctaatact taatgtagtt tgtttcacat aattttcgaa ggattagaaa
      121 aagtagggag ggagagttga atgtcaattg tcaaacaaat ggggtttgct tattgatcat
      181 tgctcaccta atacacactt cctattgtcc tgtttttaat tcttcttctt cttcgctggc
      241 tttcaacttg ccatttttct tataactaac caatcttctt aattcctctc tttttcttta
      301 tatggtacgt cataatccac aaaatcaact tttatttcga tctcgatctc tttttgttcg
      361 agagatttta agttaaggca tttggagaca tggctcaaat attgctgcac ggaacacttc
      421 atgcaacaat ctatgaagta gacaaactca agtccaattt aattcataag atcgtggacg
      481 gactagaaca cgctgtggga ctaaagaaaa atgctgtaag cctttacgca accatagact
      541 tagaaaaggc tcgagtcggc cgaacccgaa tgcttgaaca tgacacaaac ccaagatggt
      601 acgagtcatt ccacatctat tgtgcccaca tggcctccaa cctcattttc accgttaaag
      661 aagatgaccc aataggcgcc accacacttg gtcgtgcctc aatccccgtt accaaacttc
      721 taaaccaaga agttttcgat gaatgggtcg aactagtcga tgaccgtggt aaacatgttc
      781 atgggcacgc gaaaattcac attaaggtac aatttttcga agttacacga gaatgtcaat
      841 ggtctaaagg tatacaaagc ccaaaatttc ccggtgtgcc atttacgttt tttccacaac
      901 gaaacgggtg taaggttacg ctttatcaag actcgcattt gcccgataac ttcaccccga
      961 aaataccctt aacgggtggg aaactttatg agccacatcg gtgttgggag gatatatttg
     1021 atgcgatttc gaatgctaaa catttgattt acataacggg ttggtcgatt tatactgaaa
     1081 ttactttgat tcgagatctg agaaggtcaa agcccggtgg ggatatgaca ttaggagagt
     1141 tgcttaagaa aaaggctagt gaaggtgtac gggttttgat gttggtttgg gatgatcgga
     1201 cttcgggcga tttgtttaaa aacgggttca tggcgaccca tgacgaggac acgggacagt
     1261 acttcaaggg ctcggaagta aattgcgtcc tgtgtcctcg taatcctgat gacggaagaa
     1321 gtttagtcca aaacatcgag atttcggtga tgttaactca tcaccaaaaa gttgtggttg
     1381 tcgatagcgg gttacctaat ggcaactacg agaaaagacg aatcgtgagc tttataggcg
     1441 gaatcgatct ttgtgacgga cgatacgaca ccccgtttca ctcgcttttt cgaactcttg
     1501 attcagtcca tcatgacgac ttccaccaac cgaacttccc caatgcatcg ataaagaaag
     1561 gtgggcctcg agagccatgg cacgacatcc attgcaagct cgaaggccca atcgcatggg
     1621 atgtgttata caatttcgag caacgatggt tgaaacaagg agggaaggat ctactcaatg
     1681 acgttaggga tcttgatcga atcatcatcc ctccttcgcc cgtgatgctt ccgaatgatc
     1741 acgaatcttg gaatgttcag ttattccgct caatagacgg tggggctgcg ttcgggtttc
     1801 cagacaaacc tgaagatgca gcccgtgctg gtctaataag cggaaaagac aacattatcg
     1861 accgaagtat tcaagatggg tacataaacg caatacgtag agctaagaac ttcatctaca
     1921 tcgaaaacca atacttttta ggaagctcgt tcgggtggaa ctcaaacgac atcaaagatg
     1981 aagacgtaaa agctttacat ctaatcccga aagagctttc gcttaaaatc gtgagcaaga
     2041 tcgaagcagg ggaggatttt cgggtttatg ttgtgatacc aatgtggccc gagggcgagc
     2101 ccgaaagcgc atcggtacaa gctatattga attggcaaca taggactatg caaatgatgt
     2161 atacggatat tgttcatgct ttgaaagcaa aacatattgt ggctaaccca aaagactatt
     2221 tgacattctt ttgtttgggg aatagggaag tgaagaagga tggtgagtat ataccatcag
     2281 aaaaagttga agaaggtagc aattatagtc gagctcaaga agctcgaaga tttatgattt
     2341 atgttcatgc caaaatgatg atcgttgatg acgaatatat gataattgga tccgccaaca
     2401 tcaaccaaag atcaatggac ggggctcgag attctgagat agcaatgggg gcgtttcaac
     2461 catgccatct aacgaaaaga caaccggcaa ggggccaagt tcacgggttc aggatgtcgt
     2521 tatggtacga gcacttgggc cttctcgatg attgtttatc gagtcccgag agtttggctt
     2581 gtattcaaaa ggtgaataag atatcattga agtattggga tcttttttgt tccgagaaac
     2641 ttgaccatga tctgcctgga cacttgctta gttacccgat tggggtcaca gccgatggag
     2701 aggtaaccga ggtaccgggg tgcacatact tcccggacac caatgctcgg gttcttggta
     2761 ccttagcagc ttacttgcct ccaatgctaa ctacttgaat atatggttat gatttgtgag
     2821 tttggcttct acttgtattt tgtgtgatga aaacaaaaat tcattttcta ttgggatttt
     2881 ttcatttttc tttaacttta tactattttt tttttagtac ttaaatatat ggttatgata
     2941 tgtaagttta tactatttaa tgttacaagt caaaataacg at
//
LOCUS       XM_071886153            1187 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SPX domain-containing
            protein 1-like (LOC139904221), mRNA.
ACCESSION   XM_071886153
VERSION     XM_071886153.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1187
                     /gene="LOC139904221"
                     /note="SPX domain-containing protein 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139904221"
     CDS             143..1048
                     /gene="LOC139904221"
                     /codon_start=1
                     /product="SPX domain-containing protein 1-like"
                     /protein_id="XP_071742254.1"
                     /db_xref="GeneID:139904221"
                     /translation="MKFGKSLNNQIEETLPEWRDKFLSYKELKKRLKLIKPQQKSSDD
                     DDDCNPPAKRTRITGDDATMAGAVEMSAEEIDFVELLEQEVEKFNSFFVEKEEEYIIK
                     LKELQDSVMNAKDSDEEMIKIRKELVDFHGEMVLLENYSALNYTGIVKILKKYDKRTG
                     ALLRLPFIQKVLQQPFFTTDLLYKLVKECESMLDRHFPLTELSAAFDEAGIDTGGGGD
                     GGGGDGGEGPTTSTSEGHTKAKELAELEYMKSLYTKSTISALRALKEIRSKSSTVSVF
                     SLPPLQVSGIEETWNKIPLHEQLAK"
     misc_feature    146..616
                     /gene="LOC139904221"
                     /note="SPX domain of the plant protein SPX1 and similar
                     proteins; Region: SPX_AtSPX1_like; cd14481"
                     /db_xref="CDD:269902"
     polyA_site      1187
                     /gene="LOC139904221"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attgttgatt ttatttgatt aaaaaattaa atcattatat atattcgcta ttctcgctga
       61 tttcccttta cataataaac atatcaaaaa catctaatca atttcacaaa atttaattca
      121 atcaaatcaa atcaaatcaa ttatgaaatt cggaaagagt ttaaacaatc agatcgaaga
      181 aacattacct gaatggagag acaagttttt atcatacaaa gaattgaaaa aacggttgaa
      241 actcattaaa ccacaacaga aatcaagtga cgatgatgat gactgtaatc cgccggcgaa
      301 gagaacgcgg atcaccggcg atgacgctac aatggccggt gctgttgaga tgtcggcgga
      361 agaaattgat ttcgttgagt tgctggaaca ggaagttgag aaattcaatt cgttcttcgt
      421 tgagaaagaa gaagagtata tcattaaatt gaaggaattg caggatagtg taatgaatgc
      481 caaggattca gacgaagaga tgatcaagat acggaaagaa ttagttgatt ttcatggaga
      541 gatggtttta ttagagaatt atagtgcact taactacaca ggaatagtaa agatattgaa
      601 gaagtacgat aaacgaacag gggctctcct tcgtttacct tttattcaaa aagttctaca
      661 gcaaccattc ttcaccacag atttgcttta caagcttgtg aaggagtgcg agtctatgtt
      721 agaccgccac ttccctctga ctgaactctc agctgcattt gatgaagctg gcattgatac
      781 tggcggtggt ggtgatggtg gtggtggaga tggaggtgag gggcctacca ccagcactag
      841 tgagggacat acaaaagcta aagaacttgc tgagctcgaa tacatgaaga gtttgtacac
      901 aaagagtacc atttcggcgt taagggcttt gaaagaaatc agaagcaaga gctctacggt
      961 tagtgtattc tcgctgccgc ctttgcaagt aagcggaata gaggaaactt ggaataaaat
     1021 tcctcttcat gaacaactag caaaataaca tgagtatagg gtatagggta tacattgtct
     1081 gttttacatg ttacaaacga atgcgccatc ggtgctttgt attagatgct aacaacggat
     1141 gtaaaatatc atagatgatg ataattaacc tcaagatttg tagcgct
//
LOCUS       XM_071886154            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxidase 25
            (LOC139904222), mRNA.
ACCESSION   XM_071886154
VERSION     XM_071886154.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139904222"
                     /note="peroxidase 25; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 38 Proteins"
                     /db_xref="GeneID:139904222"
     CDS             29..997
                     /gene="LOC139904222"
                     /codon_start=1
                     /product="peroxidase 25"
                     /protein_id="XP_071742255.1"
                     /db_xref="GeneID:139904222"
                     /translation="MEITLLSIVSLCLILIPVAKSQLKSGFYSSTCPKAETTVRSTVE
                     THFKNDPTVAAALLRLHFHDCFVEGCDGSILIKGSSAEINASPNLGLRGFEVIDDAKT
                     QLEALCPDVVSCADILALAARDSVDLSDGPNWDVPTGRRDGRVSLASKALNLPSPLDS
                     VDAQRKKFADKGLDDRDLVTLAGAHTIGQTDCRFFRYRLYNFTTTGNSDPSLSQSALA
                     QFQSQCPKSSDGTERVALDKDSQLKFDVNYFKNVRDGNGVLESDQRLWGDPTTRDMVK
                     NYAGTIRGLLGLRFDFEFKKSMVKMSSIEVKTGAQGEIRRICSKFN"
     misc_feature    92..991
                     /gene="LOC139904222"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; Region: secretory_peroxidase; cd00693"
                     /db_xref="CDD:173827"
     misc_feature    order(182..184,191..196,200..205,212..217,296..298,
                     302..304,491..502,518..520,530..532,560..562,569..574,
                     578..583,587..601,605..610,734..736,803..805,809..811,
                     920..922)
                     /gene="LOC139904222"
                     /note="active site"
                     /db_xref="CDD:173827"
     misc_feature    order(182..184,191..196,200..205,212..214,290..292,
                     296..298,302..304,491..499,518..520,530..532,560..562,
                     569..574,578..583,587..601,608..610,734..736,803..805,
                     809..811,920..922)
                     /gene="LOC139904222"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:173827"
     misc_feature    order(203..205,284..289,491..502,599..601,605..610)
                     /gene="LOC139904222"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173827"
     misc_feature    order(218..220,227..229,239..241,245..247,584..586,
                     737..739,746..748,755..757,761..763)
                     /gene="LOC139904222"
                     /note="calcium binding sites [ion binding]; other site"
                     /db_xref="CDD:173827"
     polyA_site      1116
                     /gene="LOC139904222"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attagaaaca tccatcttat attcagaaat ggagatcact ctgttaagca tcgttagttt
       61 gtgtttgatt ttgatcccgg tagctaaatc tcaactaaaa tcagggtttt actcatctac
      121 atgtcctaaa gctgaaacta ctgtgaggtc tactgttgaa acacatttca agaatgatcc
      181 taccgttgct gctgctcttc tcaggcttca ctttcatgat tgttttgttg agggttgtga
      241 tggctcaatc ttgattaagg gtagttctgc tgagatcaat gcatcgccta atcttggatt
      301 aagaggattt gaagtcattg atgatgctaa gacacaatta gaagctttat gccctgatgt
      361 cgtttcttgt gctgatattc ttgctttggc tgctcgtgat tcagttgatt tgagtgatgg
      421 tccgaattgg gatgtgccaa cagggagacg agatggtcga gtttcgttag catctaaagc
      481 tttgaattta ccatcaccgt tagattcagt tgatgcccag agaaagaagt ttgcggataa
      541 aggccttgat gatcgtgatc tagtaacgct agcaggtgca catacaatag gccaaacaga
      601 ttgcaggttc tttaggtacc gtttatacaa tttcacaaca acggggaatt cagacccgag
      661 cttgagccaa tcagcgctag cccaatttca aagtcagtgt ccaaagagta gcgacgggac
      721 agaacgagtg gcattggaca aagacagcca actaaagttt gacgtgaact attttaagaa
      781 tgtgcgtgat ggaaacgggg ttttggagtc agatcagaga ttatggggtg acccaacaac
      841 gcgtgacatg gtgaaaaatt atgcaggaac catacggggg ttgttaggac ttagattcga
      901 tttcgagttc aaaaagtcaa tggtcaagat gagtagcatt gaagtgaaaa ctggtgccca
      961 gggtgaaatt agaaggattt gttctaagtt caactaaata agtgcaagat aattgttatt
     1021 tgtatatgta ttgaacaagt agaatgaatt agccctccat tgccaaatca tcagcttttg
     1081 tatttataaa gatatatgta tatgtatatt ttgtta
//
LOCUS       XR_011778705             667 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904223), ncRNA.
ACCESSION   XR_011778705
VERSION     XR_011778705.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..667
                     /gene="LOC139904223"
                     /note="uncharacterized LOC139904223; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904223"
     ncRNA           1..667
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904223"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904223"
ORIGIN      
        1 cacacttttt actaacctga agatgaaatc caagtatttg ggttaatgtt attcacggtg
       61 catagtttac tcatactctg ttcgtcgcaa ctttgttttt ttctaccttg tgcagcagtg
      121 gcctgggtca ttttgtaaca caatacaagg gtgttgctac acccaaaaac cagcagccaa
      181 tttcaccatc catggattgt ggccaacgag aattagtggt tcgtatcctc atgattgtct
      241 tccaagcagc ccttttgcaa aatctaagat aatggacctc actagccaat tggagtcgaa
      301 gtggccatca atatcgtgcc caccaactat cacctcggaa gaattttggc agtatgagtg
      361 gagaaagcac ttggtcatgc tctgaatttc tcctcaatct tcatgattat taggacactt
      421 gagtttaaga tgagtataga caatggcgga gacaataggg tggcttaggg gtgctcaacc
      481 acctccaact tgttcattcg aaacaaatat ttagtatatc ttaatttgaa aaaattatct
      541 taaccaatcg gtccaatagt caatagtcaa ttagtaatct tacatttttt ttgtattacg
      601 agtctaggta ttctatattt tattagccga agcacacaat atatttaaat gaaattttat
      661 ttagaga
//
LOCUS       XM_071886155            2469 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At4g32430, mitochondrial (LOC139904224),
            mRNA.
ACCESSION   XM_071886155
VERSION     XM_071886155.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2469
                     /gene="LOC139904224"
                     /note="pentatricopeptide repeat-containing protein
                     At4g32430, mitochondrial; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139904224"
     CDS             86..2383
                     /gene="LOC139904224"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At4g32430, mitochondrial"
                     /protein_id="XP_071742256.1"
                     /db_xref="GeneID:139904224"
                     /translation="MITRQLVLKRIHHTNKTVSFHSLQNGHQLFDKMPQPNLSYLHNS
                     MLNLLHQNRPFQALDIFIKQIQDVGVTHVDEASTAVAIKACRGDSKLGCQIHGFALTS
                     GLDSFLSVSNSLMNMYSLSGQLDKASVIFDNLPNPDTVSWNTLLSGFKDENNALAFAC
                     RMNYLGVSFDAVTYTTALDRCADCEEFLFGTQLHALAMKAGMQCEGFIANALVTLYSK
                     WGRIGEAEQVFDEMPSKDLVSWNALLSGYSQEGSYGVEAIKTFNEMIRLGLRLDHVSF
                     TSAVSACGHARNLALGKQIHSLAIKRGYGVHESVCNVLISAYSKCDQIKDAKLVFDDM
                     VNRNVVSWTTLISISEEHAVSLFNDMRKDGEYPNEVTFVGLISAICASNSVKEGETVH
                     GLCIKSSFFSELVVANSFITMYAKFGSMKDSVNVFQEMERKVIISWNALISGFTQNKM
                     FQECLVTFSTTIMESKPNEYTFGSVLSAIASSELISLRYGQWCHSYLFKLGLNNDPIV
                     SGALLDMYAKRGNINESRKVFDEIKDKNQVAWTAIISAYSRHGDYESVMKLYDDIKNQ
                     SFEPDSITFLSVLTACGRKGMVEKGKEVFESMVKHYKIEPTSEHYSCIVDMYGRAGRL
                     KEAEEFIKQIPGQIGLPVLQSLLGSCKVHGNMEMGKRVSDALLKMEPEESGSYVLMSN
                     LYAERGDWDEVARIRKGMREKSVKKVVGLSWADVYNGNGSPHAFSSDDTSHPQTDEIY
                     RMVWCLGSEMKFVKAEDVIEQVTVL"
     misc_feature    302..2302
                     /gene="LOC139904224"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    419..493
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    506..580
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    713..790
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    794..886
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    902..1096
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1106..1174
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1190..1279
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1295..1384
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1391..1483
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1616..1690
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1700..1783
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1799..1888
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1907..1984
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2102..2194
                     /gene="LOC139904224"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 ttttgcccta ataactgaat ttagtactcc gtaataatac cttgaaccat caaccatcaa
       61 ccatcaacca tcttgagcta ttttcatgat tacccgccaa ttagtattaa agcgtattca
      121 tcatactaat aagacagtta gctttcattc attgcaaaat ggtcaccaac tgtttgataa
      181 aatgcctcaa ccaaacctca gctatcttca taactctatg cttaatctac tgcatcaaaa
      241 tcgcccattt caagcccttg acatcttcat caaacagatt caagatgtag gtgttaccca
      301 tgtagatgaa gcctcaactg cagtcgctat caaagcatgt cgtggagact cgaaactcgg
      361 gtgtcagata cacgggtttg cattgacatc agggcttgac tcgtttttat ccgtatctaa
      421 ttcattgatg aacatgtact ccctgtccgg acagcttgat aaagcttctg taatatttga
      481 taacttgcct aatcctgata ctgtttcatg gaacacgttg ctttcagggt ttaaggatga
      541 aaacaatgcg ttagcttttg cttgtcggat gaactattta ggggttagtt ttgatgcggt
      601 gacgtacact actgccttgg atcgttgtgc ggattgtgaa gaatttttgt ttggaaccca
      661 attgcatgct cttgctatga aagctggaat gcagtgtgaa gggtttattg cgaatgcact
      721 tgtaacgttg tactcgaaat ggggacgtat tggtgaagca gaacaagtgt ttgatgaaat
      781 gccgagtaag gatttagttt catggaatgc attgctttca ggttatagtc aagaaggaag
      841 ttatggagta gaagcgatta aaacttttaa tgagatgatt agattgggat taaggcttga
      901 tcatgtttcg tttacaagtg ccgtttcagc ttgtggtcat gctagaaact tggctctcgg
      961 gaaacagata catagtttgg cgattaaaag gggatatgga gtgcatgagt cggtttgcaa
     1021 tgttttgatc tccgcatatt caaaatgcga tcaaattaaa gatgcaaagt tggtgtttga
     1081 tgatatggtg aatcgtaatg tagtgtcatg gaccactttg atctctataa gcgaagaaca
     1141 cgcggtatct ttattcaacg acatgagaaa ggacggtgag tatcctaacg aggtgacgtt
     1201 tgttggcttg atttcggcca tatgtgcgag taatagtgtg aaagaaggtg aaacggttca
     1261 tggtttatgt ataaagtcta gctttttctc agagctagtt gttgcaaata gctttattac
     1321 catgtatgct aagtttggct ccatgaaaga ctcggtcaac gtttttcaag aaatggaacg
     1381 aaaggtgatt atttcatgga acgcgttaat atccggattt actcaaaaca agatgtttca
     1441 agaatgttta gtaacatttt ccaccacaat tatggagtca aaaccaaatg agtacacatt
     1501 cgggagcgtt ttaagtgcca tagcttcttc cgagttaatc tccttaagat acgggcaatg
     1561 gtgccactct tatttattta aactcgggtt gaataacgac ccaattgttt ctggtgctct
     1621 tcttgacatg tatgctaaac gtggaaatat aaacgaatct cgtaaagtgt ttgatgaaat
     1681 caaggataag aaccaagttg catggactgc aattatttcg gcttattcaa gacatggaga
     1741 ttatgaatcc gttatgaaat tatacgatga cataaagaac caatctttcg agcccgattc
     1801 cataacattt ttatctgtat taactgcgtg tggaagaaag ggaatggtgg aaaaggggaa
     1861 ggaagtattc gagtcaatgg tcaaacatta taaaatcgag ccgacatcag aacattattc
     1921 ttgtatagtg gacatgtatg ggcgggccgg gcggttaaag gaagcagaag agtttataaa
     1981 acaaatacca ggtcaaatcg ggctcccggt tttgcagagt ttattaggat catgtaaagt
     2041 tcatgggaac atggagatgg ggaagcgagt ttctgacgct ttattgaaga tggagcctga
     2101 agagtcgggg tcgtatgtat tgatgtcgaa tttgtatgca gaaagaggtg attgggatga
     2161 agttgcaaga ataaggaaag ggatgaggga aaaaagtgtg aagaaagttg tggggttaag
     2221 ttgggcggat gtttataacg gtaatgggtc gccacatgct ttttcatcag acgatacgtc
     2281 tcatccgcag acagatgaga tttatcgtat ggtgtggtgt cttggatcag aaatgaagtt
     2341 tgtaaaggcg gaagatgtca tcgagcaagt tacagttcta tagtagtgat aaaatcttca
     2401 caggtttgta gttcttatta ggaattattg caacaggaat gtgtttgttt tgcttaagat
     2461 cctgataga
//
LOCUS       XM_071886156             677 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904226), mRNA.
ACCESSION   XM_071886156
VERSION     XM_071886156.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..677
                     /gene="LOC139904226"
                     /note="uncharacterized LOC139904226; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139904226"
     CDS             96..482
                     /gene="LOC139904226"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742257.1"
                     /db_xref="GeneID:139904226"
                     /translation="MTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATK
                     TLNRGISEFVVMAADAEPLEIILHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIAC
                     SVTSNEGSQLKTQIQQLKDAIEKLLI"
     misc_feature    114..479
                     /gene="LOC139904226"
                     /note="U4/U6.U5 small nuclear ribonucleoprotein SNU13;
                     Region: SNU13; cd21104"
                     /db_xref="CDD:411046"
     misc_feature    order(201..218,225..227,237..239,273..278,288..290,
                     351..353,378..395)
                     /gene="LOC139904226"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:411046"
     misc_feature    order(213..215,222..227,234..236,279..281,285..290,
                     294..299,306..308)
                     /gene="LOC139904226"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:411046"
     polyA_site      677
                     /gene="LOC139904226"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catcaatatc ctttcaattc aactcatata aacaaggtaa aaccctagcc tccctctatt
       61 tcacaaaaac acagtgtctt cagtacgccg ttaaaatgac tggtgaagct gtgaatccaa
      121 aagcataccc acttgcagat gctcaactaa ctattacaat tttggatctt gtgcaacaag
      181 ctgctaatta caagcagctt aagaagggtg ctaatgaagc tacgaagacc cttaacaggg
      241 gtatatctga gtttgttgtg atggcagcgg atgctgagcc tcttgaaatt attcttcatc
      301 ttcccctcct tgctgaagac aagaatgtac cttatgtttt tgtgccatca aaacaagcac
      361 ttggacgagc atgtggagtc actaggcctg ttattgcatg ttccgtgacc agtaacgaag
      421 gcagccaatt gaaaactcaa atacagcagc taaaggatgc aattgagaag cttttgatct
      481 gaaagaggaa atatggaaat tcggtgtgat gggccttctt cgatgtgatt accgttagag
      541 gctttgatct ttcttttcct ataacagcta tcttgaatca ttttaatgta ctgaatattt
      601 ttattttttc ctgcttgcat ttttgaactg aaaaacacta tggcctctag cttttatgtg
      661 acattgaagt tttatca
//
LOCUS       XM_071886157            1753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ
            49-like (LOC139904227), mRNA.
ACCESSION   XM_071886157
VERSION     XM_071886157.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1753
                     /gene="LOC139904227"
                     /note="chaperone protein dnaJ 49-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139904227"
     CDS             314..1381
                     /gene="LOC139904227"
                     /codon_start=1
                     /product="chaperone protein dnaJ 49-like"
                     /protein_id="XP_071742258.1"
                     /db_xref="GeneID:139904227"
                     /translation="MDGNKDDALRCLKIAKDALRSGDRDRALKFISKAKRLDPDIPVD
                     NLVSNLEPENTTNESGSGSGSGLSKQPENDSGVRRRVPVTETGSSGSKGYTEEQVMIA
                     SEIKRKKDYYEILGLEKNCSVEDVRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFQC
                     LSVEENRKQYDLVGSDEPVYETRAARRGARGNGFYYEGDVDAEEIFRNFFFGGMNPRA
                     TTQFTGFSFGPGTGVRMQAGNGSGGMRSLIQLLPVLLIILLNFLPSNEPIYSLSRTYG
                     YDHVLTTQKGVNFYVKSRNFEQDYPLNSQERERLEERIERDYVSILSHNCRLEIQRNQ
                     WGYYQQETPNCDRLKQFEAIT"
     misc_feature    635..>964
                     /gene="LOC139904227"
                     /note="chaperone protein DnaJ; Provisional; Region:
                     PRK14298"
                     /db_xref="CDD:184612"
     misc_feature    1091..1357
                     /gene="LOC139904227"
                     /note="Domain of unknown function (DUF1977); Region:
                     DUF1977; pfam09320"
                     /db_xref="CDD:462754"
ORIGIN      
        1 tcaaccggtc atgatccgcc cttttttgtc caccggaaga tgatgaattt catctctttc
       61 taatttcgtt caagttttta tctcacaaat cttgtatccg gcaaattaag ttctaaaacc
      121 caaattaatt tgccataaat cgttcttaat ttcatcacac agggctccgg ataactattt
      181 gatcaaaatc tagggtttct tgatcgattt ctggtaagat aactttctac acttatatac
      241 ttcaattccg gtcatatact ttagtatttc gtccaattag ttgaagtttc aaataaagtt
      301 taaatctttc aatatggatg gtaataaaga tgacgcttta agatgtttga aaattgccaa
      361 agatgcatta aggtcaggcg atcgagatcg tgccctaaaa tttatatcga aagctaaacg
      421 attagatcca gatattcctg ttgataatct ggtatccaat ttagaacccg aaaataccac
      481 caatgaatcc ggttctggtt caggatcagg tttgtcaaag cagcccgaga atgattcggg
      541 tgtgaggcga agggttccgg ttacagaaac cgggtcttcg ggttcgaaag gttatactga
      601 ggaacaggtc atgattgcga gtgaaattaa gaggaaaaaa gattattatg aaatattagg
      661 tttagaaaag aattgtagtg ttgaggatgt tagaaaagct tataggaaat tgtctttgaa
      721 agttcatcct gataagaata aagctccggg ttcagaagaa gcgtttaaga aagtatcgaa
      781 agcgtttcag tgtttaagcg ttgaagagaa taggaaacag tatgatcttg ttgggtcaga
      841 tgagcccgtt tacgagacgc gggctgctag acgtggtgct cgtggtaacg gattctacta
      901 cgaaggtgat gttgatgccg aggagatttt taggaacttc ttttttggag ggatgaatcc
      961 gcgggccact actcagttta ctggttttag tttcgggccg ggcactggtg taagaatgca
     1021 ggctggaaac gggtcagggg ggatgaggtc gttgattcaa ttgttgccgg tgcttttgat
     1081 tattttgtta aactttttgc catctaatga accgatttat tccctttcaa ggacttatgg
     1141 ttatgatcat gttttaacta cacaaaaagg tgttaacttt tatgtgaaat cgcgtaactt
     1201 tgagcaggat tatccgttga atagtcaaga aagggaacga cttgaagaaa ggattgagcg
     1261 tgattatgtt tcgattcttt ctcataattg tcggcttgag atacaacgaa atcagtgggg
     1321 gtattatcaa caagaaacac caaattgtga taggttgaag cagtttgagg ctatcacctg
     1381 atgccttgaa tgaagatttt tggttatcca aatttcgtat ttggaggcct acgattttgc
     1441 cagaaggaat tcgagatcag gagggtgttt gcaggaaagc tgctttttgc atcgcgttat
     1501 acacaccaat ccttttctgg cagaaatttt gttttcgctt tttcctgcaa tgactgctaa
     1561 aactatgtta taggatacat ttgagagtgt atatgattta atcctggttt gtatttgtta
     1621 aaaggcttat gctatacgct actttgaaat gcattgtttg ttatagtgga tgattatgtg
     1681 ttcggagttt gcgaaaacta gtgtcagtaa ctcagtaagt agacttgacg tcttttacag
     1741 gcagagtcac aac
//
LOCUS       XM_071886158            1714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides adenine nucleotide
            transporter BT1, chloroplastic/mitochondrial-like (LOC139904228),
            mRNA.
ACCESSION   XM_071886158
VERSION     XM_071886158.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1714
                     /gene="LOC139904228"
                     /note="adenine nucleotide transporter BT1,
                     chloroplastic/mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139904228"
     CDS             256..1452
                     /gene="LOC139904228"
                     /codon_start=1
                     /product="adenine nucleotide transporter BT1,
                     chloroplastic/mitochondrial-like"
                     /protein_id="XP_071742259.1"
                     /db_xref="GeneID:139904228"
                     /translation="MDTRRLLENNGNGLFPDSGIGFLWCSKDDNFSQSASFFASVGQM
                     GRGGFGGVNPNSANSTSTHDNEGVKLPCLSKVVSTPESSFMTVEVPKMDADEGVVKKK
                     KGGLKLKVKIGNPSLRRLISGAIAGAVSRTCVAPLETIRTHLMVGSSGHSTTEVFQDI
                     MHTEGWPGLFRGNLINVIRVAPSKAIELFAYDTVKKSLAPKPGEKPKPRIPESLIAGA
                     VAGISSTICTYPLELVKTRLTVQRGVYKNLVDAFIKIVTEEGPAELYRGLTPSLIGVV
                     PYAATNYFAYDTLRKTYKKIMKKDDIGNIATLLIGSAAGAISSSATFPLEVARKHMQA
                     GAVNGRVYNNMLHALLTILEKEGVAGLYRGLGPSCIKIVPAAGISFMCYEACKKILVE
                     KEDDEP"
     misc_feature    598..849
                     /gene="LOC139904228"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    883..1140
                     /gene="LOC139904228"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    <1219..1434
                     /gene="LOC139904228"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     polyA_site      1714
                     /gene="LOC139904228"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctggggttta aaattaggtc aaaattgcca tacataatac acccacctat attttaaacg
       61 attccattgt caccaaacca agaacaaaac ctcaaacgcc tctctctcat tgcaatttgt
      121 attgggagag agaccaataa gttattaaag tagtaattga atgtgtaaat tagcagccgt
      181 ccgatttcca tttttatcaa actcaccaga aaagaaacaa tttttgtgga ctacactgta
      241 atcttggtga gttgaatgga tacgagacgt ttattggaga acaatggaaa tgggttattc
      301 cccgattcag gaatagggtt tctttggtgt tcaaaagatg ataacttttc tcaatctgct
      361 agctttttcg caagtgttgg gcagatgggt aggggtggtt ttggaggtgt gaaccctaat
      421 tcagcaaact ctacaagtac ccacgataat gaaggcgtca aacttccgtg tttatcgaag
      481 gttgtttcga cacccgaatc aagttttatg actgttgaag taccaaaaat ggatgcagat
      541 gagggtgttg tcaagaagaa aaaaggtggt ttgaaattaa aagtcaagat cgggaatcct
      601 tcgttaagga ggttaattag cggtgcaatt gcgggagcag tttcaagaac atgtgttgct
      661 ccgttggaaa cgattaggac tcatttgatg gtagggagtt cgggacattc tactactgaa
      721 gtttttcaag atattatgca cactgaaggt tggcctggcc tcttcagggg taatttgatc
      781 aatgtaattc gtgttgcgcc tagcaaagca attgagttat ttgcttatga tactgtcaag
      841 aaaagtttgg ctcctaaacc cggagagaag ccaaaaccgc gtataccaga gtcactaatt
      901 gcaggcgctg ttgctggtat cagctcaacc atatgcacct accctcttga gttagttaaa
      961 acccgactca ccgtccagag aggtgtgtac aagaatcttg tagatgcgtt tataaagatt
     1021 gtgacagaag agggacccgc agaactctac cggggcctca caccaagtct aattggtgta
     1081 gtcccgtatg ctgccacaaa ctattttgca tatgatacgt taaggaaaac gtacaagaaa
     1141 atcatgaaaa aagatgatat tgggaacatt gcaaccttat taattggatc agcagctggc
     1201 gcgatttcaa gtagtgcaac cttcccactt gaagtggcac gaaaacatat gcaggctggt
     1261 gctgtaaacg ggcgggtcta caacaacatg cttcatgctc ttttgaccat tcttgaaaag
     1321 gaaggtgtgg cgggtttgta tcgaggtttg ggacccagct gtattaaaat tgttccagct
     1381 gcagggattt cattcatgtg ctatgaggcg tgtaagaaaa tactagtcga gaaagaagac
     1441 gatgaaccat aaaagaatcg agccgagaag ggtaagttta gattttggct gtttttgttt
     1501 tcagaaagat actactgtaa taaaactcca aaagattcgg tttttatggg gattttgttt
     1561 cggggataat tttttttaac agaatacatt ttttcttaat agatagagga aaaagttagt
     1621 tgttttgtgt tatgatcaat ttgtgattcg aacgtatact tgatgtaaga tgacatattt
     1681 tgaatgagga atttgcatta tggaattcgt tttt
//
LOCUS       XM_071886159            1488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NADH-cytochrome b5
            reductase-like protein (LOC139904229), mRNA.
ACCESSION   XM_071886159
VERSION     XM_071886159.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1488
                     /gene="LOC139904229"
                     /note="NADH-cytochrome b5 reductase-like protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139904229"
     CDS             115..1083
                     /gene="LOC139904229"
                     /codon_start=1
                     /product="NADH-cytochrome b5 reductase-like protein"
                     /protein_id="XP_071742260.1"
                     /db_xref="GeneID:139904229"
                     /translation="MSTFFMRLSKSTPIAFSHAFRSQSHFKFPVGAIAAVSGGISYFY
                     YFSEPNLAHLDQINEETSPKTALISDKWVEFKLQEKAKVSHNTHLYRFSFDPNLKLGL
                     DVASCLVTRAPLGEDAEGKKKYVIRPYTPISDPDSRGYFDLMIKIYPEGKMSQHFDKL
                     KPGDVLEVKGPIEKIRYTPNMKKHIGMIAGGSGITPMLQVIEAILKNPDDNTKVSLIY
                     ANVSPDDILLKKKLDMLAASHPNLKVFYTVDSPSKYWVGGTGYISKDMASKGLPAPSD
                     DTLILVCGPPGMMEHISGGKAKDWSQGEVSGVLKELGYTEGMVYKF"
     misc_feature    337..1080
                     /gene="LOC139904229"
                     /note="Cytochrome b5 reductase catalyzes the reduction of
                     2 molecules of cytochrome b5 using NADH as an electron
                     donor. Like ferredoxin reductases, these proteins have an
                     N-terminal FAD binding subdomain and a C-terminal NADH
                     binding subdomain, separated by a...; Region:
                     cyt_b5_reduct_like; cd06183"
                     /db_xref="CDD:99780"
     misc_feature    order(433..435,493..504,544..552,556..558,562..576,
                     688..690,697..702,1078..1080)
                     /gene="LOC139904229"
                     /note="FAD binding pocket [chemical binding]; other site"
                     /db_xref="CDD:99780"
     misc_feature    order(493..495,499..504)
                     /gene="LOC139904229"
                     /note="FAD binding motif [chemical binding]; other site"
                     /db_xref="CDD:99780"
     misc_feature    order(550..552,556..558,688..693,769..777,859..861,
                     895..897,964..978)
                     /gene="LOC139904229"
                     /note="NAD binding pocket [chemical binding]; other site"
                     /db_xref="CDD:99780"
     misc_feature    order(565..567,574..576,583..585,601..603,625..627,
                     631..633)
                     /gene="LOC139904229"
                     /note="phosphate binding motif [ion binding]; other site"
                     /db_xref="CDD:99780"
     misc_feature    order(673..675,685..696,700..702)
                     /gene="LOC139904229"
                     /note="beta-alpha-beta structure motif; other site"
                     /db_xref="CDD:99780"
ORIGIN      
        1 gtactacatt cttccctcaa ctctgaaaat cgaaagggct tgatttagcg aaaaaccctc
       61 aaaatctaaa tctcacactt ccgtcactcg tatcgtatct ttccatttct gactatgtca
      121 acctttttca tgcgattaag caaatcaact ccgattgcat tttcgcacgc tttccgatca
      181 caatctcatt tcaaatttcc ggtcggtgca atcgctgccg tctccggtgg aatctcctat
      241 ttctattact tttccgagcc gaatttggct cacctggatc aaatcaacga ggaaacaagt
      301 cctaaaactg ccctcatttc tgataaatgg gtagaattta agcttcagga gaaggctaaa
      361 gtcagccaca atactcactt gtacaggttt tcttttgatc caaatctcaa attaggactt
      421 gatgttgcat catgcctcgt tacaagggct ccattgggag aagacgcgga agggaaaaag
      481 aaatatgtta tccgtccgta cacaccgata tcagatccag attctagagg ttactttgat
      541 ttaatgatta agatctatcc tgaagggaaa atgagccaac attttgacaa actaaagcct
      601 ggtgatgtgc tcgaagtaaa aggacccatt gagaagataa gatatactcc caatatgaag
      661 aaacacattg gcatgattgc tggtgggtca ggaatcactc caatgcttca ggttattgaa
      721 gcgattctta agaatcctga tgataacact aaagtatctt tgatttacgc gaacgtatct
      781 cctgatgaca ttctgctaaa aaagaaactt gatatgcttg ctgctagcca tcccaatttg
      841 aaggtatttt atactgttga cagtccatca aagtactggg ttggaggtac aggttacata
      901 tcaaaggata tggcatcaaa aggcttacct gcaccaagtg acgatacact tatactagtg
      961 tgtggtccac ctggaatgat ggaacatata tctgggggga aggcgaaaga ttggtcacaa
     1021 ggcgaggtga gcggtgtact taaagagctt ggatacacag aaggaatggt ttacaagttt
     1081 taatggatcg gtgagtttga ctcccagcaa cattgtaata atttttgtca tgaaagaaca
     1141 cttgtttatg tccgaatcga acttcttttc agaacttcga gtacaaccta taatgaaagc
     1201 aagcaataca ccctgtttaa gggtccagct tgtgagttta tggtttttat tttctatttt
     1261 ttaatccttt ttagcaaaag gattgatgaa aggaagatgg gcctgctagc cagttttagt
     1321 taaataaatg taggaggaat tatgtcttac ttatttgctg tatcaatttt tataataatt
     1381 tgtttattaa acagaagaaa tgctggtatt gccatgctta acttgatcaa acaaaatgat
     1441 ggcatttgaa tagacttaag tcctgagctt taagaatgaa ataaataa
//
LOCUS       XM_071886160            2604 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904230), transcript variant X1, mRNA.
ACCESSION   XM_071886160
VERSION     XM_071886160.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2604
                     /gene="LOC139904230"
                     /note="uncharacterized LOC139904230; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904230"
     CDS             66..455
                     /gene="LOC139904230"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742261.1"
                     /db_xref="GeneID:139904230"
                     /translation="MISTGDGGSAGAADGDGGGNFPLLRTLVKGAAVTVGGVFSITMI
                     SSTAITLFTLHKKDKFGSKNASTCNVCRGKGFYMCKLCKGNATIEWSSLYDPVFINPC
                     LCPTCDGHRIQRCLNCLGSGFIQQAKG"
     misc_feature    <252..>440
                     /gene="LOC139904230"
                     /note="chaperone protein DnaJ; Provisional; Region:
                     PRK14281"
                     /db_xref="CDD:237657"
ORIGIN      
        1 aaaagatagg aaaaaaatca aatatggcat gaaaggataa aacccagttg gcaaattttt
       61 gtcagatgat ttcaactggc gatggtggtt ctgccggtgc agcggatggt gatggcggtg
      121 gcaattttcc gctgctgcgt acattagtca aaggtgcagc tgtaactgta ggtggtgttt
      181 tttcaatcac catgatttca tctactgcaa ttacattatt caccctacat aaaaaagata
      241 aatttggatc aaagaatgca agtacatgta atgtatgtag agggaaaggg ttttacatgt
      301 gtaaattatg taaagggaat gctactatag agtggtcttc attgtatgat cctgtgttta
      361 taaacccttg tctttgtcct acttgtgatg gacataggat tcaacgatgt cttaactgtt
      421 tggggagtgg attcatccaa caagctaaag gttgacttgt taaagaaggt atattgtttg
      481 tttgttggag gctcttgttg tgttcaaatc aaatcgtatc aattccgctt aaaggtttac
      541 tggtttgtga atctttttgt atgcaacacg agatgaaagc atggcaactt gatatacgaa
      601 gaaattggaa cgatcaaaga aagaagtaag aataatctat gctcgattta ctgtaggtta
      661 tatgatatat gatgtggcga aactagcatc ccgctatgtg ctattttctt aatgtatgtt
      721 ttttgtaagt gttaggcatt gagttatgac agtggaataa aagttgttct tgttcactaa
      781 agattctgaa actatttatc agtactttgt gtgcttgttc caaactttaa atagatcaaa
      841 acaacttgta aagaagctcg attcaacgac tcaaaaacat cagcaaaact ggacgtcatg
      901 catatcgata cttaaagatc ataattatga ttcattaatg atgatcgatc ccagttttgt
      961 ttatatttaa gctcaaccgt gaaactcaaa cgtaagcttg atatttcgac tcgatggact
     1021 ttatgaattt gagtaggatc tgttgatact atcttgcaat accaaatatc ttgcaaggat
     1081 tgatatgatc ttgctatgtc tatagcttga aaggattttg actgccttgg gcaaaagtga
     1141 tttattatat tataataatt attaataata aatattaatg gtgggtgatt gctataaaat
     1201 cgcaattccc tttagtattt atcaaacttg agagtgtaag gcgttccttt ttttggggtg
     1261 ggtcgggttc aaaaaataaa atggtttggg taaagtggga tcatattctt ctaccttttg
     1321 aaatgggcgg gttggaattg ggttctctta aaatcaaaaa cttatccttg atcggcaagt
     1381 ggtggtggag gttcaaaacc gaacccacct ctttgtgagt caaggtcatt aaaagtattt
     1441 tcggggcttc aggttgtctt ggggtgggtt ctcaactaaa ctgttcttcg ggttctttat
     1501 ggtgtaatat tgtgcatact ggagctgttt tggatgtgtt gggtataccc tttagggtgt
     1561 cgttttgcag gaaaataggt aatggtgcag agacgtcttt ttggtgcgat caatggcttg
     1621 gagaggtggt gctaaaagta aattctccag gctttaccgg ttagatgctg atcagtctgc
     1681 agtggttcgt gacagagtta ttcgagacaa ttcagttcta aaattggtgg attgttggac
     1741 ccgtacacct tcgggtagag ttgcaggtga attatccgaa gttaaataat tttcttgctg
     1801 aattcacatt ggacagtagc aaggatgatt atggttgtgg agtttgggta atggtgtttt
     1861 cactaccaat tctcttgcat ccatgattga ttccaagctc ctttcagtgg ggactaatat
     1921 aagtgaaact ttaagtaatt atttggtacc aaagaaggta gagatattta tttggcgagt
     1981 gcgaaagaga agactttcta ttttaccgga acttgacaag cgaggagttg atcttcattc
     2041 ggtatcgtgt cctctttgta atgatgaaat tgaatcctta gatcatgcat taattttgtg
     2101 taaacatgtg ttggacattt ggagtaaaat ctacaattgg tggggttttg gcaatgtggt
     2161 gaatttaagt attagcgagg cgtttctctg gaattcgaat aaaattacct cggatgtcgg
     2221 gaggcaaatt tggcaagcgg tcgaatgggt gagcggttat cttatatgga agaataggaa
     2281 ccaaacgatt ttcaagaaaa aatcatggaa tcctccgatt acgctcagtg aaattcaagt
     2341 aaaaacatac gattggattg cgaagagaat caagaaaaaa aaaaaactat cgattggcat
     2401 atgtggttaa ctaatccaca acttgctatt tcttgatcat gtttttctcg tgaggtattc
     2461 ggttgccttc tcggcatctt agtgcagttt aatgtatgta tgtagtattt gtgtgaatta
     2521 ctagtcgtga ttgcaggcca ttgtggtcct tccttggctg ctattgtatt gtaccatttg
     2581 ttgtttgtaa tgtaaactat gttt
//
LOCUS       XR_011778706            2416 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904230), transcript variant X2, misc_RNA.
ACCESSION   XR_011778706
VERSION     XR_011778706.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2416
                     /gene="LOC139904230"
                     /note="uncharacterized LOC139904230; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904230"
     misc_RNA        1..2416
                     /gene="LOC139904230"
                     /product="uncharacterized protein, transcript variant X2"
                     /db_xref="GeneID:139904230"
ORIGIN      
        1 aaaagatagg aaaaaaatca aatatggcat gaaaggataa aacccagttg gcaaattttt
       61 gtcagatgat ttcaactggc gatggtggtt ctgccggtgc agcggatggt gatggcggtg
      121 gcaattttcc gctgctgcgt acattagtca aaggtgcagc tgtaactgta ggtggtgttt
      181 tttcaatcac catgatttca tctactgcaa ttacattatt caccctacat aaaaaagata
      241 aatttggatc aaagaatgca agtacatgta atgtatgtag agggaaaggg ttttacatgt
      301 gtaaattatg taaagggaat gctactatag agtggtcttc attgtatgat cctgtgttta
      361 taaacccttg tctttgtcct acttgtgatg gacataggat tcaacgatgt cttaactgtt
      421 tggggagtgg attcatccaa caagctaaag gttgacttgt taaagaaggt atattgtttg
      481 tttgttggag gctcttgttg tgttcaaatc aaatcgtatc aattccgctt aaaggtttac
      541 tggtttgtga atctttttgt atgcaacacg agatgaaagc atggcaactt gatatacgaa
      601 gaaattggaa cgatcaaaga aagaagtaag aataatctat gctcgattta ctgtaggtta
      661 tatgatatat gatgtggcga aactagcatc ccgctatgtg ctattttctt aatgtatgtt
      721 ttttgtaagt gttaggcatt gagttatgac agtggaataa aagttgttct tgttcactaa
      781 agattctgaa actatttatc agtactttgt gtgcttgttc caaactttaa atagatcaaa
      841 acaacttgta aagaagctcg attcaacgac tcaaaaacat cagcaaaact ggacgtcatg
      901 catatcgata cttaaagatc ataattatga ttcattaatg atgatcgatc ccagttttgt
      961 ttatatttaa gctcaaccgt gaaactcaaa cgtaagcttg atatttcgac tcgatggact
     1021 ttatgaattt gagtaggatc tgttgatact atcttgcaat accaaatatc ttgcaaggat
     1081 tgatatgatc ttgctatgtc tatagcttga aaggattttg actgccttgg gcaaaagtga
     1141 tttattatat tataataatt attaataata aatattaatg gtgggtgatt gctataaaat
     1201 cgcaattccc tttagtattt atcaaacttg agagtgtaag gcgttccttt ttttggggtg
     1261 ggtcgggttc aaaaaataaa atggtttggg taaagtggga tcatattctt ctaccttttg
     1321 aaatgggcgg gttggaattg ggttctctta aaatcaaaaa cttatccttg atcggcaagt
     1381 ggtggtggag gttcaaaacc gaacccacct ctttgtgagt caaggtcatt aaaagtattt
     1441 tcggggcttc aggttgtctt ggggtgggtt ctcaactaaa ctgttcttcg ggttctttat
     1501 ggtgtaatat tgtgcatact ggagctgttt tggatgtgtt gggtataccc tttagggtgt
     1561 cgttttgcag gaaaataggt aatggtgcag agacgtcttt ttggtgcgat caatggcttg
     1621 gagaggtggt gctaaaagta aattctccag gctttaccgg ttagatgctg atcagtctgc
     1681 agtggttcgt gacagagtta ttcgagacaa ttcagttcta aaattggtgg attgttggac
     1741 ccgtacacct tcgggtagag ttgcagaagg tagagatatt tatttggcga gtgcgaaaga
     1801 gaagactttc tattttaccg gaacttgaca agcgaggagt tgatcttcat tcggtatcgt
     1861 gtcctctttg taatgatgaa attgaatcct tagatcatgc attaattttg tgtaaacatg
     1921 tgttggacat ttggagtaaa atctacaatt ggtggggttt tggcaatgtg gtgaatttaa
     1981 gtattagcga ggcgtttctc tggaattcga ataaaattac ctcggatgtc gggaggcaaa
     2041 tttggcaagc ggtcgaatgg gtgagcggtt atcttatatg gaagaatagg aaccaaacga
     2101 ttttcaagaa aaaatcatgg aatcctccga ttacgctcag tgaaattcaa gtaaaaacat
     2161 acgattggat tgcgaagaga atcaagaaaa aaaaaaaact atcgattggc atatgtggtt
     2221 aactaatcca caacttgcta tttcttgatc atgtttttct cgtgaggtat tcggttgcct
     2281 tctcggcatc ttagtgcagt ttaatgtatg tatgtagtat ttgtgtgaat tactagtcgt
     2341 gattgcaggc cattgtggtc cttccttggc tgctattgta ttgtaccatt tgttgtttgt
     2401 aatgtaaact atgttt
//
LOCUS       XR_011778707            2413 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904230), transcript variant X3, misc_RNA.
ACCESSION   XR_011778707
VERSION     XR_011778707.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2413
                     /gene="LOC139904230"
                     /note="uncharacterized LOC139904230; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904230"
     misc_RNA        1..2413
                     /gene="LOC139904230"
                     /product="uncharacterized protein, transcript variant X3"
                     /db_xref="GeneID:139904230"
ORIGIN      
        1 aaaagatagg aaaaaaatca aatatggcat gaaaggataa aacccagttg gcaaattttt
       61 gtcagatgat ttcaactggc gatggtggtt ctgccggtgc agcggatggt gatggcggtg
      121 gcaattttcc gctgctgcgt acattagtca aaggtgcagc tgtaactgta ggtggtgttt
      181 tttcaatcac catgatttca tctactgcaa ttacattatt caccctacat aaaaaagata
      241 aatttggatc aaagaatgca agtacatgta atgtatgtag agggaaaggg ttttacatgt
      301 gtaaattatg taaagggaat gctactatag agtggtcttc attgtatgat cctgtgttta
      361 taaacccttg tctttgtcct acttgtgatg gacataggat tcaacgatgt cttaactgtt
      421 tggggagtgg attcatccaa caagctaaag gttgacttgt taaagaaggt atattgtttg
      481 tttgttggag gctcttgttg tgttcaaatc aaatcgtatc aattccgctt aaaggtttac
      541 tggtttgtga atctttttgt atgcaacacg agatgaaagc atggcaactt gatatacgaa
      601 gaaattggaa cgatcaaaga aagaagtaag aataatctat gctcgattta ctgtaggtta
      661 tatgatatat gatgtggcga aactagcatc ccgctatgtg ctattttctt aatgtatgtt
      721 ttttgtaagt gttaggcatt gagttatgac agtggaataa aagttgttct tgttcactaa
      781 agattctgaa actatttatc agtactttgt gtgcttgttc caaactttaa atagatcaaa
      841 acaacttgta aagaagctcg attcaacgac tcaaaaacat cagcaaaact ggacgtcatg
      901 catatcgata cttaaagatc ataattatga ttcattaatg atgatcgatc ccagttttgt
      961 ttatatttaa gctcaaccgt gaaactcaaa cgtaagcttg atatttcgac tcgatggact
     1021 ttatgaattt gagtaggatc tgttgatact atcttgcaat accaaatatc ttgcaaggat
     1081 tgatatgatc ttgctatgtc tatagcttga aaggattttg actgccttgg gcaaaagtga
     1141 tttattatat tataataatt attaataata aatattaatg gtgggtgatt gctataaaat
     1201 cgcaattccc tttagtattt atcaaacttg agagtgtaag gcgttccttt ttttggggtg
     1261 ggtcgggttc aaaaaataaa atggtttggg taaagtggga tcatattctt ctaccttttg
     1321 aaatgggcgg gttggaattg ggttctctta aaatcaaaaa cttatccttg atcggcaagt
     1381 ggtggtggag gttcaaaacc gaacccacct ctttgtgagt caaggtcatt aaaagtattt
     1441 tcggggcttc aggttgtctt ggggtgggtt ctcaactaaa ctgttcttcg ggttctttat
     1501 ggtgtaatat tgtgcatact ggagctgttt tggatgtgtt gggtataccc tttagggtgt
     1561 cgttttgcag gaaaataggt aatggtgcag agacgtcttt ttggtgcgat caatggcttg
     1621 gagaggtggt gctaaaagta aattctccag gctttaccgg ttagatgctg atcagtctgc
     1681 agtggttcgt gacagagtta ttcgagacaa ttcagttcta aaattggtgg attgttggac
     1741 ccgtacacct tcgggtagag ttgcaggtag agatatttat ttggcgagtg cgaaagagaa
     1801 gactttctat tttaccggaa cttgacaagc gaggagttga tcttcattcg gtatcgtgtc
     1861 ctctttgtaa tgatgaaatt gaatccttag atcatgcatt aattttgtgt aaacatgtgt
     1921 tggacatttg gagtaaaatc tacaattggt ggggttttgg caatgtggtg aatttaagta
     1981 ttagcgaggc gtttctctgg aattcgaata aaattacctc ggatgtcggg aggcaaattt
     2041 ggcaagcggt cgaatgggtg agcggttatc ttatatggaa gaataggaac caaacgattt
     2101 tcaagaaaaa atcatggaat cctccgatta cgctcagtga aattcaagta aaaacatacg
     2161 attggattgc gaagagaatc aagaaaaaaa aaaaactatc gattggcata tgtggttaac
     2221 taatccacaa cttgctattt cttgatcatg tttttctcgt gaggtattcg gttgccttct
     2281 cggcatctta gtgcagttta atgtatgtat gtagtatttg tgtgaattac tagtcgtgat
     2341 tgcaggccat tgtggtcctt ccttggctgc tattgtattg taccatttgt tgtttgtaat
     2401 gtaaactatg ttt
//
LOCUS       XM_071886161            1175 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides deSI-like protein At4g17486
            (LOC139904231), transcript variant X1, mRNA.
ACCESSION   XM_071886161
VERSION     XM_071886161.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1175
                     /gene="LOC139904231"
                     /note="deSI-like protein At4g17486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139904231"
     CDS             268..933
                     /gene="LOC139904231"
                     /codon_start=1
                     /product="deSI-like protein At4g17486 isoform X1"
                     /protein_id="XP_071742262.1"
                     /db_xref="GeneID:139904231"
                     /translation="MEGSTLSSNCATSGTYEGYVDRELFLNIYDLTPMNAYSIWFGFG
                     IFHTGIEVYGMEYGFGAHDYSISGVFEVEPRSCPGFIYRCSISLGHLSMSASEFREFI
                     ETMASDYHGDTYHLISKNCNHFTDDICQRLTGRRIPGWVNRLAKLGSLFSCLLPDSLE
                     ATTVKQMPEYHTYDDDDDDDGSDSGSNASSQDASQSDEVDQKVLLSPTPAPEIAFIKG
                     ISR"
     misc_feature    343..744
                     /gene="LOC139904231"
                     /note="PPPDE putative peptidase domain; Region:
                     Peptidase_C97; pfam05903"
                     /db_xref="CDD:461775"
ORIGIN      
        1 tgaaagataa aaagtgagaa aaattcaatc tttctgattc cggtggccgg aaagagagaa
       61 cccttttttt ggtttgtgtg tgtgggtgtt tgtatgtgtg tttctggttg caaagaatat
      121 gcaactcagg aacaacaaca tcaacccatt cttgcaataa aggggttttt tctttcttga
      181 tcccccattt ttgatttact tttcttaaaa aaaataatat taacaatatc ttccatttgt
      241 tatcaattaa acaaaagaaa ttagaaaatg gagggtagta cattatcatc aaattgtgca
      301 actagtggaa catacgaagg ttacgttgat agagagcttt ttttgaatat atatgatcta
      361 actcctatga atgcttacag catttggttt ggatttggta tttttcatac cggtattgaa
      421 gtgtatggta tggaatatgg ttttggggca catgattatt cgattagtgg agtgttcgaa
      481 gttgaaccaa gaagctgtcc aggtttcata tacaggtgtt caatttctct cgggcatttg
      541 agtatgtcgg cttcagagtt tagagaattt attgagacca tggcttcgga ttaccatggg
      601 gacacctatc acctaatttc taagaattgc aatcatttta ctgacgatat ctgtcagagg
      661 ttaacaggta gaaggattcc cggatgggtg aatcgattgg cgaagctagg ttctctcttc
      721 agttgtttac ttcctgatag ccttgaagca actaccgtta aacagatgcc agagtatcat
      781 acatatgatg atgatgatga tgatgatggg agtgattctg ggtcaaatgc aagtagtcaa
      841 gacgcatcac aaagtgatga agttgaccaa aaagtcctgc tttcaccaac tcctgcacct
      901 gaaatagctt ttattaaagg gatctcaagg taggtaatac ttgtgttttc tggtgtgtat
      961 tcgtaactgg gtgtgttggt tatcctttga gaggattata ccgacagacg aggctgtaaa
     1021 tgatgactga tgcccgcaaa tacgagtagt gttttttttc tttccttttt ctcagttatg
     1081 attcttcatc cacctctttc aagtgttttg taagcatctc ttgtagatgc aataatgcac
     1141 agttatggtg gatctgtcat taattatgtt agaaa
//
LOCUS       XM_071886162            1169 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides deSI-like protein At4g17486
            (LOC139904231), transcript variant X2, mRNA.
ACCESSION   XM_071886162
VERSION     XM_071886162.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1169
                     /gene="LOC139904231"
                     /note="deSI-like protein At4g17486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904231"
     CDS             268..927
                     /gene="LOC139904231"
                     /codon_start=1
                     /product="deSI-like protein At4g17486 isoform X2"
                     /protein_id="XP_071742263.1"
                     /db_xref="GeneID:139904231"
                     /translation="MEGSTLSSNCATSGTYEGYVDRELFLNIYDLTPMNAYSIWFGFG
                     IFHTGIEVYGMEYGFGAHDYSISGVFEVEPRSCPGFIYRCSISLGHLSMSASEFREFI
                     ETMASDYHGDTYHLISKNCNHFTDDICQRLTGRRIPGWVNRLAKLGSLFSCLLPDSLE
                     ATTVKQMPEYHTYDDDDDGSDSGSNASSQDASQSDEVDQKVLLSPTPAPEIAFIKGIS
                     R"
     misc_feature    343..744
                     /gene="LOC139904231"
                     /note="PPPDE putative peptidase domain; Region:
                     Peptidase_C97; pfam05903"
                     /db_xref="CDD:461775"
ORIGIN      
        1 tgaaagataa aaagtgagaa aaattcaatc tttctgattc cggtggccgg aaagagagaa
       61 cccttttttt ggtttgtgtg tgtgggtgtt tgtatgtgtg tttctggttg caaagaatat
      121 gcaactcagg aacaacaaca tcaacccatt cttgcaataa aggggttttt tctttcttga
      181 tcccccattt ttgatttact tttcttaaaa aaaataatat taacaatatc ttccatttgt
      241 tatcaattaa acaaaagaaa ttagaaaatg gagggtagta cattatcatc aaattgtgca
      301 actagtggaa catacgaagg ttacgttgat agagagcttt ttttgaatat atatgatcta
      361 actcctatga atgcttacag catttggttt ggatttggta tttttcatac cggtattgaa
      421 gtgtatggta tggaatatgg ttttggggca catgattatt cgattagtgg agtgttcgaa
      481 gttgaaccaa gaagctgtcc aggtttcata tacaggtgtt caatttctct cgggcatttg
      541 agtatgtcgg cttcagagtt tagagaattt attgagacca tggcttcgga ttaccatggg
      601 gacacctatc acctaatttc taagaattgc aatcatttta ctgacgatat ctgtcagagg
      661 ttaacaggta gaaggattcc cggatgggtg aatcgattgg cgaagctagg ttctctcttc
      721 agttgtttac ttcctgatag ccttgaagca actaccgtta aacagatgcc agagtatcat
      781 acatatgatg atgatgatga tgggagtgat tctgggtcaa atgcaagtag tcaagacgca
      841 tcacaaagtg atgaagttga ccaaaaagtc ctgctttcac caactcctgc acctgaaata
      901 gcttttatta aagggatctc aaggtaggta atacttgtgt tttctggtgt gtattcgtaa
      961 ctgggtgtgt tggttatcct ttgagaggat tataccgaca gacgaggctg taaatgatga
     1021 ctgatgcccg caaatacgag tagtgttttt tttctttcct ttttctcagt tatgattctt
     1081 catccacctc tttcaagtgt tttgtaagca tctcttgtag atgcaataat gcacagttat
     1141 ggtggatctg tcattaatta tgttagaaa
//
LOCUS       XM_071886163            1487 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904232), transcript variant X1, mRNA.
ACCESSION   XM_071886163
VERSION     XM_071886163.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1487
                     /gene="LOC139904232"
                     /note="uncharacterized LOC139904232; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 31
                     Proteins"
                     /db_xref="GeneID:139904232"
     CDS             267..1151
                     /gene="LOC139904232"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742264.1"
                     /db_xref="GeneID:139904232"
                     /translation="MKSKMRPTCGICSSQVFFSLAAFTGCISVIINMTFTDGPLDSGG
                     TTTIRSFEFGPTYVVKPKGKHQATIVWLHGLGDDGLSWSQLLETLPLPNIKWICPTSP
                     AQPLTLFGGLATNAWFDVIAMSENAIQDVEGMDASAAYVLSLLSTEPPNVKLGVGGFS
                     MGAATAIYCASCFARGKFGNGSVYSTHLDVVVGLSGWLPCANDLTNEVDGIDVENRAA
                     SMPILLCHGRGDDVVHFRYGVKSADKLTSAGFQNLTFKSFQTLGHNLIPEEMDVVTSW
                     LTSKLELEGEPPRRTSTG"
     misc_feature    438..1076
                     /gene="LOC139904232"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 atattgagct ctatgtatag ctagttcaac atgtaaaaaa cttgggacaa tgcatttgat
       61 cacaaaatta tatttgaaac tggaatttcg attataatgg attccaggac acgaaatatg
      121 gcaattttat aacttccatc ataagaagaa aaaaaaggta tttcaacaag tgttatcatt
      181 ggtgtatcat atcacaaagg tatttgcacc atggaacgat ttgttcctga tatgatatga
      241 tatatagata ccggttttat ttatagatga agtctaagat gaggccgacg tgtgggattt
      301 gttcatcgca ggttttcttc tctctggctg catttactgg ttgcatttcc gtcattatta
      361 acatgacttt tactgacgga cctctggatt ctggtggtac tactactatt aggagttttg
      421 aatttggacc aacatatgtg gtgaaaccta aaggcaaaca ccaggccaca attgtctggt
      481 tacacggcct tggtgatgat ggtttaagct ggtcgcagct cttagagacc cttcctcttc
      541 caaatataaa atggatatgc cctacttctc ctgctcagcc attaacttta tttggtggac
      601 ttgctacgaa tgcatggttt gatgtgatcg ccatgtctga aaatgcaatt caagatgtag
      661 aaggaatgga tgcttcagca gcatatgttt tgagcctgct ttcaaccgaa cctccaaacg
      721 tcaaacttgg tgtaggaggc tttagtatgg gtgcagcaac tgcaatatac tgtgcaagtt
      781 gctttgctcg tgggaaattt ggaaatggat ctgtttactc tactcatttg gatgtcgtcg
      841 ttggccttag tggctggctc ccatgtgcaa atgatctaac taacgaggtt gacggcatcg
      901 acgttgaaaa tcgtgctgca tcaatgccca ttttgctttg tcacggaaga ggtgacgatg
      961 tggttcattt tcgctacggt gtgaagtcag cagataaact aacttcagca ggctttcaaa
     1021 acttgacttt caagtccttc caaacgctcg gtcataattt aattccagaa gaaatggatg
     1081 tggttacgtc atggctaact tcaaaacttg aacttgaggg tgagccaccg aggcgtactt
     1141 ccaccggttg attcagatga aacaaccaac ggacctgaaa acgaagaaca gatggatata
     1201 gagagggctg catcaaccaa aataacatat tcccttgatg tagatatatc tagtttgttt
     1261 agagtttacg gaggaccaaa tcacgagtcg taccatttta tgttatgtgg cctgcttgtt
     1321 agttatgttt gataattttt tttttttttt tttttttttg gttaaaactg catataacac
     1381 acattatgag ggatgttgaa gggggctggt tgctccgtta tatgcatgct aatggggcaa
     1441 atatgtttct cattgtggtt caccttcatc tttttcgtga tctatat
//
LOCUS       XM_071886164            1315 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904232), transcript variant X2, mRNA.
ACCESSION   XM_071886164
VERSION     XM_071886164.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1315
                     /gene="LOC139904232"
                     /note="uncharacterized LOC139904232; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     Proteins"
                     /db_xref="GeneID:139904232"
     CDS             191..979
                     /gene="LOC139904232"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742265.1"
                     /db_xref="GeneID:139904232"
                     /translation="MTFTDGPLDSGGTTTIRSFEFGPTYVVKPKGKHQATIVWLHGLG
                     DDGLSWSQLLETLPLPNIKWICPTSPAQPLTLFGGLATNAWFDVIAMSENAIQDVEGM
                     DASAAYVLSLLSTEPPNVKLGVGGFSMGAATAIYCASCFARGKFGNGSVYSTHLDVVV
                     GLSGWLPCANDLTNEVDGIDVENRAASMPILLCHGRGDDVVHFRYGVKSADKLTSAGF
                     QNLTFKSFQTLGHNLIPEEMDVVTSWLTSKLELEGEPPRRTSTG"
     misc_feature    266..904
                     /gene="LOC139904232"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 ctataaacta actatccgct aaaattgtat cagaacgtta ctttaattct cacaataaat
       61 caaacatata taccacaaat attgacacaa agtggaagca cagtgcagtt gatatttatt
      121 taagttccat catctccagg ttttcttctc tctggctgca tttactggtt gcatttccgt
      181 cattattaac atgactttta ctgacggacc tctggattct ggtggtacta ctactattag
      241 gagttttgaa tttggaccaa catatgtggt gaaacctaaa ggcaaacacc aggccacaat
      301 tgtctggtta cacggccttg gtgatgatgg tttaagctgg tcgcagctct tagagaccct
      361 tcctcttcca aatataaaat ggatatgccc tacttctcct gctcagccat taactttatt
      421 tggtggactt gctacgaatg catggtttga tgtgatcgcc atgtctgaaa atgcaattca
      481 agatgtagaa ggaatggatg cttcagcagc atatgttttg agcctgcttt caaccgaacc
      541 tccaaacgtc aaacttggtg taggaggctt tagtatgggt gcagcaactg caatatactg
      601 tgcaagttgc tttgctcgtg ggaaatttgg aaatggatct gtttactcta ctcatttgga
      661 tgtcgtcgtt ggccttagtg gctggctccc atgtgcaaat gatctaacta acgaggttga
      721 cggcatcgac gttgaaaatc gtgctgcatc aatgcccatt ttgctttgtc acggaagagg
      781 tgacgatgtg gttcattttc gctacggtgt gaagtcagca gataaactaa cttcagcagg
      841 ctttcaaaac ttgactttca agtccttcca aacgctcggt cataatttaa ttccagaaga
      901 aatggatgtg gttacgtcat ggctaacttc aaaacttgaa cttgagggtg agccaccgag
      961 gcgtacttcc accggttgat tcagatgaaa caaccaacgg acctgaaaac gaagaacaga
     1021 tggatataga gagggctgca tcaaccaaaa taacatattc ccttgatgta gatatatcta
     1081 gtttgtttag agtttacgga ggaccaaatc acgagtcgta ccattttatg ttatgtggcc
     1141 tgcttgttag ttatgtttga taattttttt tttttttttt tttttttggt taaaactgca
     1201 tataacacac attatgaggg atgttgaagg gggctggttg ctccgttata tgcatgctaa
     1261 tggggcaaat atgtttctca ttgtggttca ccttcatctt tttcgtgatc tatat
//
LOCUS       XM_071886165            1221 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904232), transcript variant X3, mRNA.
ACCESSION   XM_071886165
VERSION     XM_071886165.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1221
                     /gene="LOC139904232"
                     /note="uncharacterized LOC139904232; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     Proteins"
                     /db_xref="GeneID:139904232"
     CDS             97..885
                     /gene="LOC139904232"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742266.1"
                     /db_xref="GeneID:139904232"
                     /translation="MTFTDGPLDSGGTTTIRSFEFGPTYVVKPKGKHQATIVWLHGLG
                     DDGLSWSQLLETLPLPNIKWICPTSPAQPLTLFGGLATNAWFDVIAMSENAIQDVEGM
                     DASAAYVLSLLSTEPPNVKLGVGGFSMGAATAIYCASCFARGKFGNGSVYSTHLDVVV
                     GLSGWLPCANDLTNEVDGIDVENRAASMPILLCHGRGDDVVHFRYGVKSADKLTSAGF
                     QNLTFKSFQTLGHNLIPEEMDVVTSWLTSKLELEGEPPRRTSTG"
     misc_feature    172..810
                     /gene="LOC139904232"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 aaggtatttc aacaagtgtt atcattggtg tatcatatca caaaggtttt cttctctctg
       61 gctgcattta ctggttgcat ttccgtcatt attaacatga cttttactga cggacctctg
      121 gattctggtg gtactactac tattaggagt tttgaatttg gaccaacata tgtggtgaaa
      181 cctaaaggca aacaccaggc cacaattgtc tggttacacg gccttggtga tgatggttta
      241 agctggtcgc agctcttaga gacccttcct cttccaaata taaaatggat atgccctact
      301 tctcctgctc agccattaac tttatttggt ggacttgcta cgaatgcatg gtttgatgtg
      361 atcgccatgt ctgaaaatgc aattcaagat gtagaaggaa tggatgcttc agcagcatat
      421 gttttgagcc tgctttcaac cgaacctcca aacgtcaaac ttggtgtagg aggctttagt
      481 atgggtgcag caactgcaat atactgtgca agttgctttg ctcgtgggaa atttggaaat
      541 ggatctgttt actctactca tttggatgtc gtcgttggcc ttagtggctg gctcccatgt
      601 gcaaatgatc taactaacga ggttgacggc atcgacgttg aaaatcgtgc tgcatcaatg
      661 cccattttgc tttgtcacgg aagaggtgac gatgtggttc attttcgcta cggtgtgaag
      721 tcagcagata aactaacttc agcaggcttt caaaacttga ctttcaagtc cttccaaacg
      781 ctcggtcata atttaattcc agaagaaatg gatgtggtta cgtcatggct aacttcaaaa
      841 cttgaacttg agggtgagcc accgaggcgt acttccaccg gttgattcag atgaaacaac
      901 caacggacct gaaaacgaag aacagatgga tatagagagg gctgcatcaa ccaaaataac
      961 atattccctt gatgtagata tatctagttt gtttagagtt tacggaggac caaatcacga
     1021 gtcgtaccat tttatgttat gtggcctgct tgttagttat gtttgataat tttttttttt
     1081 tttttttttt tttggttaaa actgcatata acacacatta tgagggatgt tgaagggggc
     1141 tggttgctcc gttatatgca tgctaatggg gcaaatatgt ttctcattgt ggttcacctt
     1201 catctttttc gtgatctata t
//
LOCUS       XM_071886166            1761 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein arginine
            N-methyltransferase PRMT10-like (LOC139904233), transcript variant
            X1, mRNA.
ACCESSION   XM_071886166
VERSION     XM_071886166.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1761
                     /gene="LOC139904233"
                     /note="protein arginine N-methyltransferase PRMT10-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139904233"
     CDS             191..1339
                     /gene="LOC139904233"
                     /codon_start=1
                     /product="protein arginine N-methyltransferase
                     PRMT10-like"
                     /protein_id="XP_071742267.1"
                     /db_xref="GeneID:139904233"
                     /translation="MGTTANGTSAATDKATSTSNGNATVDKGVDFANYFCTYAFLYHQ
                     KEMLSDRVRMDAYYNSVFNNKHHFIGKTVLDVGTGSGILAIWCAQTGAKKVYAVEATK
                     MAEHARQLVKSNNLHDVVEVIEGSIEDITLPEKVDVIISEWMGYFLLRESMFDSVICA
                     RDRWLKPTGVMYPSHARMWLAPIRSGLADQKMSDYEGCMDDWHGFVNETNTYYGVDMS
                     VLTKPFSEEQKKYYLQNSVWNNLHPNQVVGTCAILKEIDCLTVTVEDIFKIEASISLT
                     ITKEDTRLCGFGGWFDVHFNGRKENPAECEVELTTAPSVDDGTHWGQQVFLLHPPVRV
                     NEKDEVLVNFSMSRSEENHRLMNVDLGFQIKLSSGKMLAPVRNKFYIE"
     misc_feature    311..>745
                     /gene="LOC139904233"
                     /note="Predicted RNA methylase [General function
                     prediction only]; Region: COG4076"
                     /db_xref="CDD:443253"
ORIGIN      
        1 aagagctaac acatgaatct tcctctttct gctattctcc caatcgctgt ttttacatct
       61 ccctccataa ttcctacaaa aacataaacc cctgcagtca atctttcttt atctttatct
      121 ttattattat taatatttaa tattaaatta atttaattat aaatattaat acaaataaat
      181 aaaagaaaaa atgggaacga cagcaaacgg aacatcagcc gccaccgata aggcaacatc
      241 gaccagcaat ggtaacgcca ccgtcgataa aggagtcgat ttcgctaatt atttctgcac
      301 ttatgccttt ctttaccacc aaaaggaaat gctttcagac cgtgttcgta tggacgctta
      361 ttacaactct gttttcaata acaaacatca cttcattggc aaaactgtgt tggatgtagg
      421 aacagggagt ggtattctag caatttggtg cgctcaaact ggtgcaaaga aggtatatgc
      481 tgttgaagct actaagatgg ctgaacatgc acgtcagctt gttaaatcga ataaccttca
      541 tgatgtggtt gaagtaatcg agggttcaat agaagatata acattgcctg agaaagttga
      601 tgtaattata tctgaatgga tgggatactt tcttctacgt gaatctatgt ttgattctgt
      661 aatatgcgcc cgtgatcgct ggctgaaacc aactggagtt atgtatccaa gccatgctcg
      721 catgtggttg gcacctatca gatcaggatt agcagatcaa aaaatgagtg attatgaagg
      781 atgtatggat gactggcatg gttttgtgaa tgaaactaac acttattacg gtgtcgatat
      841 gagtgttttg accaaaccgt tttctgaaga gcagaaaaag tactacttgc agaattctgt
      901 gtggaacaac ctgcatccca accaagtagt cggaacatgt gctattttaa aggagattga
      961 ttgtttaacc gtaactgttg aagacatctt caaaattgaa gccagcattt cattaacaat
     1021 cactaaagag gacacgagat tatgtggatt tggtggctgg tttgatgttc attttaatgg
     1081 aagaaaggag aatcccgctg agtgtgaagt cgagttgaca acagctccca gcgtagatga
     1141 tggcacacat tggggacaac aggtctttct cttgcatcct cctgttcgtg tcaacgaaaa
     1201 ggacgaggtt ctcgttaatt tttcaatgag ccgttcagaa gaaaatcatc gcttgatgaa
     1261 cgttgatctt ggttttcaaa tcaagttgtc atctggcaaa atgttggcac ctgtcagaaa
     1321 caagttttat atagaatgag gccaaacata ccaaactaat accgatgtag taaggtactc
     1381 tatgaaatta tttaaatttg tcatgaaatg tatgttgtat cgtatctcat ttattacttt
     1441 cttttgcttt ggtccccgcg atggcagcct agtggttggg gacatgcaac ataaagcgga
     1501 ggtcatgggt tcaatcccag ccccatgtcc ttttaagcat gggttacacg attttcctct
     1561 cacatgtccg gtcggtgtgg gccgctagag ggtcggtttt accttttttt tttttttttt
     1621 ttactttctt ttagttctaa acttttagtt ttaaactttt aaattatagt ttacatataa
     1681 tagagtagtt actggctact gcattctttg ctgctttgtt tacaccctct gtattactat
     1741 tatcttagtt actttctagt t
//
LOCUS       XM_071886167            1668 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein arginine
            N-methyltransferase PRMT10-like (LOC139904233), transcript variant
            X2, mRNA.
ACCESSION   XM_071886167
VERSION     XM_071886167.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1668
                     /gene="LOC139904233"
                     /note="protein arginine N-methyltransferase PRMT10-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139904233"
     CDS             191..1339
                     /gene="LOC139904233"
                     /codon_start=1
                     /product="protein arginine N-methyltransferase
                     PRMT10-like"
                     /protein_id="XP_071742268.1"
                     /db_xref="GeneID:139904233"
                     /translation="MGTTANGTSAATDKATSTSNGNATVDKGVDFANYFCTYAFLYHQ
                     KEMLSDRVRMDAYYNSVFNNKHHFIGKTVLDVGTGSGILAIWCAQTGAKKVYAVEATK
                     MAEHARQLVKSNNLHDVVEVIEGSIEDITLPEKVDVIISEWMGYFLLRESMFDSVICA
                     RDRWLKPTGVMYPSHARMWLAPIRSGLADQKMSDYEGCMDDWHGFVNETNTYYGVDMS
                     VLTKPFSEEQKKYYLQNSVWNNLHPNQVVGTCAILKEIDCLTVTVEDIFKIEASISLT
                     ITKEDTRLCGFGGWFDVHFNGRKENPAECEVELTTAPSVDDGTHWGQQVFLLHPPVRV
                     NEKDEVLVNFSMSRSEENHRLMNVDLGFQIKLSSGKMLAPVRNKFYIE"
     misc_feature    311..>745
                     /gene="LOC139904233"
                     /note="Predicted RNA methylase [General function
                     prediction only]; Region: COG4076"
                     /db_xref="CDD:443253"
ORIGIN      
        1 aagagctaac acatgaatct tcctctttct gctattctcc caatcgctgt ttttacatct
       61 ccctccataa ttcctacaaa aacataaacc cctgcagtca atctttcttt atctttatct
      121 ttattattat taatatttaa tattaaatta atttaattat aaatattaat acaaataaat
      181 aaaagaaaaa atgggaacga cagcaaacgg aacatcagcc gccaccgata aggcaacatc
      241 gaccagcaat ggtaacgcca ccgtcgataa aggagtcgat ttcgctaatt atttctgcac
      301 ttatgccttt ctttaccacc aaaaggaaat gctttcagac cgtgttcgta tggacgctta
      361 ttacaactct gttttcaata acaaacatca cttcattggc aaaactgtgt tggatgtagg
      421 aacagggagt ggtattctag caatttggtg cgctcaaact ggtgcaaaga aggtatatgc
      481 tgttgaagct actaagatgg ctgaacatgc acgtcagctt gttaaatcga ataaccttca
      541 tgatgtggtt gaagtaatcg agggttcaat agaagatata acattgcctg agaaagttga
      601 tgtaattata tctgaatgga tgggatactt tcttctacgt gaatctatgt ttgattctgt
      661 aatatgcgcc cgtgatcgct ggctgaaacc aactggagtt atgtatccaa gccatgctcg
      721 catgtggttg gcacctatca gatcaggatt agcagatcaa aaaatgagtg attatgaagg
      781 atgtatggat gactggcatg gttttgtgaa tgaaactaac acttattacg gtgtcgatat
      841 gagtgttttg accaaaccgt tttctgaaga gcagaaaaag tactacttgc agaattctgt
      901 gtggaacaac ctgcatccca accaagtagt cggaacatgt gctattttaa aggagattga
      961 ttgtttaacc gtaactgttg aagacatctt caaaattgaa gccagcattt cattaacaat
     1021 cactaaagag gacacgagat tatgtggatt tggtggctgg tttgatgttc attttaatgg
     1081 aagaaaggag aatcccgctg agtgtgaagt cgagttgaca acagctccca gcgtagatga
     1141 tggcacacat tggggacaac aggtctttct cttgcatcct cctgttcgtg tcaacgaaaa
     1201 ggacgaggtt ctcgttaatt tttcaatgag ccgttcagaa gaaaatcatc gcttgatgaa
     1261 cgttgatctt ggttttcaaa tcaagttgtc atctggcaaa atgttggcac ctgtcagaaa
     1321 caagttttat atagaatgag gccaaacata ccaaactaat accgatgtag taagcctagt
     1381 ggttggggac atgcaacata aagcggaggt catgggttca atcccagccc catgtccttt
     1441 taagcatggg ttacacgatt ttcctctcac atgtccggtc ggtgtgggcc gctagagggt
     1501 cggttttacc tttttttttt ttttttttta ctttctttta gttctaaact tttagtttta
     1561 aacttttaaa ttatagttta catataatag agtagttact ggctactgca ttctttgctg
     1621 ctttgtttac accctctgta ttactattat cttagttact ttctagtt
//
LOCUS       XM_071886168            1521 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904234), transcript variant X1, mRNA.
ACCESSION   XM_071886168
VERSION     XM_071886168.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1521
                     /gene="LOC139904234"
                     /note="uncharacterized LOC139904234; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904234"
     CDS             204..1349
                     /gene="LOC139904234"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742269.1"
                     /db_xref="GeneID:139904234"
                     /translation="MKYKRGSIVEVLTTGEVPYHSWRRAQIVSGKRHGYTVRYDLYSG
                     SANQEIVEHVSTKFIRPCPPLVKILECMPGDVVEVFHELSWKMAVVSKAFSCDLFLVR
                     LVGSFIEFEASKSELRVRQSWQNDEWVVIGKVHKNNINGRCNKLLKRNLDSDSYQKQM
                     VAKGDSYIKSLQFGVQNDNLQESHIVSARTLKRGSPYYCSQDEVNEGSAQKLRITQKE
                     GRRLRVLIESPDKVDAVPNFKKLPSEECLHTADMERKDLSGTYRKVYDYDDDSVVCSV
                     GSCSSNSYSRDDIEENGSHDSDAESVCQGGHEDIALYNKEVAAEIHRLELQAYRYTIQ
                     ALHASGPLTWEKETMVTNLRMSLHISNDEHLIELKNLISTKSIIRST"
     misc_feature    219..395
                     /gene="LOC139904234"
                     /note="Agenet domain; Region: Agenet; pfam05641"
                     /db_xref="CDD:461700"
     misc_feature    420..578
                     /gene="LOC139904234"
                     /note="Tudor-like domain present in plant sequences;
                     Region: Agenet; smart00743"
                     /db_xref="CDD:214798"
     misc_feature    1158..1334
                     /gene="LOC139904234"
                     /note="ENT domain; Region: ENT; pfam03735"
                     /db_xref="CDD:461032"
ORIGIN      
        1 agaaaggtgc ggagtataca tcaaatcaaa gcgtatagta acaacaatac caatgtcctc
       61 tcaacaagct attcattcat tcaatcattc attcttcctc tcaactataa caacatttca
      121 attcacaaaa ctctcgattc aaaatttcgt catcgatcac gattctgagg actgtgattt
      181 aagataaagg cgagtttcac atcatgaaat ataaaagagg tagtatagtc gaggtgttga
      241 ccacgggcga ggttccttat cattcttggc gtcgtgctca aatagtttct ggaaaaaggc
      301 acggctacac tgttaggtac gacttgtatt ctggttctgc caaccaggag atagttgaac
      361 atgtatctac gaaatttatt agaccgtgtc ctcctttggt gaaaatttta gaatgtatgc
      421 ctggtgacgt ggtggaagtg tttcacgagc tttcttggaa gatggcagtt gtgtccaagg
      481 ctttcagttg tgacttgttt ctagttagat tagttggatc gttcattgag tttgaagcaa
      541 gtaaatcaga acttcgtgtg cgacaatctt ggcaaaatga tgaatgggta gtgattggca
      601 aggttcacaa aaataacata aatggacggt gcaataagct cttgaagcgt aatttggatt
      661 cagactccta tcagaagcaa atggtcgcca aaggagattc ctatataaaa agtctccagt
      721 ttggtgttca gaatgacaac ttacaggaat cgcatattgt ttcagcgaga accctgaagc
      781 gagggtcacc ctactattgt tctcaagacg aggtgaatga aggatcagcc cagaaattga
      841 gaatcactca aaaagagggc cgacgccttc gagtactgat cgaatcacct gataaggtag
      901 atgctgttcc taactttaaa aaactgccct ctgaagaatg cttacataca gctgacatgg
      961 agaggaaaga tctaagtggc acatacagaa aagtatatga ttatgatgat gatagtgttg
     1021 tgtgctccgt aggtagttgc agtagtaaca gttatagtcg tgatgatatt gaggagaatg
     1081 gaagtcacga tagtgatgcc gagtctgttt gtcaaggggg gcatgaagat attgctcttt
     1141 ataataagga agttgctgca gaaatacata ggctagagtt gcaagcatat cgatatacca
     1201 ttcaggcatt gcatgcatcg ggacccttaa cttgggagaa agaaacaatg gtaacaaacc
     1261 ttcgtatgtc cctccatata tcaaacgatg agcatttgat tgagctaaaa aacttaatat
     1321 ctaccaaaag tattattcgt agtacctgac aggaaaaccg agaatagaag ttttttttta
     1381 catttttttc ttttagccct ttatttctat tactacaatt cagttctcca ttgactgcgt
     1441 cgcataattg taaaaagaat ttgttaccat cttttgtgtc tattgttatc atgacatatg
     1501 gtagtctatt ggaaattttg t
//
LOCUS       XM_071886169            1667 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904234), transcript variant X2, mRNA.
ACCESSION   XM_071886169
VERSION     XM_071886169.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1667
                     /gene="LOC139904234"
                     /note="uncharacterized LOC139904234; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904234"
     CDS             204..1298
                     /gene="LOC139904234"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742270.1"
                     /db_xref="GeneID:139904234"
                     /translation="MKYKRGSIVEVLTTGEVPYHSWRRAQIVSGKRHGYTVRYDLYSG
                     SANQEIVEHVSTKFIRPCPPLVKILECMPGDVVEVFHELSWKMAVVSKAFSCDLFLVR
                     LVGSFIEFEASKSELRVRQSWQNDEWVVIGKVHKNNINGRCNKLLKRNLDSDSYQKQM
                     VAKGDSYIKSLQFGVQNDNLQESHIVSARTLKRGSPYYCSQDEVNEGSAQKLRITQKE
                     GRRLRVLIESPDKVDAVPNFKKLPSEECLHTADMERKDLSGTYRKVYDYDDDSVVCSV
                     GSCSSNSYSRDDIEENGSHDSDAESVCQGGHEDIALYNKEVAAEIHRLELQAYRYTIQ
                     ALHASGPLTWEKETMAQSWSLVHLAYESVS"
     misc_feature    219..395
                     /gene="LOC139904234"
                     /note="Agenet domain; Region: Agenet; pfam05641"
                     /db_xref="CDD:461700"
     misc_feature    420..578
                     /gene="LOC139904234"
                     /note="Tudor-like domain present in plant sequences;
                     Region: Agenet; smart00743"
                     /db_xref="CDD:214798"
     misc_feature    1158..>1256
                     /gene="LOC139904234"
                     /note="ENT domain; Region: ENT; pfam03735"
                     /db_xref="CDD:461032"
ORIGIN      
        1 agaaaggtgc ggagtataca tcaaatcaaa gcgtatagta acaacaatac caatgtcctc
       61 tcaacaagct attcattcat tcaatcattc attcttcctc tcaactataa caacatttca
      121 attcacaaaa ctctcgattc aaaatttcgt catcgatcac gattctgagg actgtgattt
      181 aagataaagg cgagtttcac atcatgaaat ataaaagagg tagtatagtc gaggtgttga
      241 ccacgggcga ggttccttat cattcttggc gtcgtgctca aatagtttct ggaaaaaggc
      301 acggctacac tgttaggtac gacttgtatt ctggttctgc caaccaggag atagttgaac
      361 atgtatctac gaaatttatt agaccgtgtc ctcctttggt gaaaatttta gaatgtatgc
      421 ctggtgacgt ggtggaagtg tttcacgagc tttcttggaa gatggcagtt gtgtccaagg
      481 ctttcagttg tgacttgttt ctagttagat tagttggatc gttcattgag tttgaagcaa
      541 gtaaatcaga acttcgtgtg cgacaatctt ggcaaaatga tgaatgggta gtgattggca
      601 aggttcacaa aaataacata aatggacggt gcaataagct cttgaagcgt aatttggatt
      661 cagactccta tcagaagcaa atggtcgcca aaggagattc ctatataaaa agtctccagt
      721 ttggtgttca gaatgacaac ttacaggaat cgcatattgt ttcagcgaga accctgaagc
      781 gagggtcacc ctactattgt tctcaagacg aggtgaatga aggatcagcc cagaaattga
      841 gaatcactca aaaagagggc cgacgccttc gagtactgat cgaatcacct gataaggtag
      901 atgctgttcc taactttaaa aaactgccct ctgaagaatg cttacataca gctgacatgg
      961 agaggaaaga tctaagtggc acatacagaa aagtatatga ttatgatgat gatagtgttg
     1021 tgtgctccgt aggtagttgc agtagtaaca gttatagtcg tgatgatatt gaggagaatg
     1081 gaagtcacga tagtgatgcc gagtctgttt gtcaaggggg gcatgaagat attgctcttt
     1141 ataataagga agttgctgca gaaatacata ggctagagtt gcaagcatat cgatatacca
     1201 ttcaggcatt gcatgcatcg ggacccttaa cttgggagaa agaaacaatg gcccaaagtt
     1261 ggagccttgt acaccttgct tatgaatctg taagttgata tcgggtgtgc caccttctat
     1321 gggcatgaga atgtggggct aggctgaatc agatctgcta caaataactg atcagcctca
     1381 tgtacccttg gtatactgcc atggtgaaag tatcactttg ggctgtctgt aatcttctaa
     1441 ttttgtcttt gaaggatgca ggttgatgtt caaatccaat actatacccg cttttgtcct
     1501 tccgtgaagg ttaaacaggt gcttagacgt tgttgcttcc gctgttagac ttgctgtctt
     1561 ggtattatag acttgctgtt acagacttgc tgtgttagac tttcgctgca ttacttagag
     1621 atgtctcaat catggaacct ttattttgca ttcgcaactt atgttat
//
LOCUS       XM_071886170            1736 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904234), transcript variant X3, mRNA.
ACCESSION   XM_071886170
VERSION     XM_071886170.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1736
                     /gene="LOC139904234"
                     /note="uncharacterized LOC139904234; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904234"
     CDS             204..1298
                     /gene="LOC139904234"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742271.1"
                     /db_xref="GeneID:139904234"
                     /translation="MKYKRGSIVEVLTTGEVPYHSWRRAQIVSGKRHGYTVRYDLYSG
                     SANQEIVEHVSTKFIRPCPPLVKILECMPGDVVEVFHELSWKMAVVSKAFSCDLFLVR
                     LVGSFIEFEASKSELRVRQSWQNDEWVVIGKVHKNNINGRCNKLLKRNLDSDSYQKQM
                     VAKGDSYIKSLQFGVQNDNLQESHIVSARTLKRGSPYYCSQDEVNEGSAQKLRITQKE
                     GRRLRVLIESPDKVDAVPNFKKLPSEECLHTADMERKDLSGTYRKVYDYDDDSVVCSV
                     GSCSSNSYSRDDIEENGSHDSDAESVCQGGHEDIALYNKEVAAEIHRLELQAYRYTIQ
                     ALHASGPLTWEKETMAQSWSLVHLAYESVS"
     misc_feature    219..395
                     /gene="LOC139904234"
                     /note="Agenet domain; Region: Agenet; pfam05641"
                     /db_xref="CDD:461700"
     misc_feature    420..578
                     /gene="LOC139904234"
                     /note="Tudor-like domain present in plant sequences;
                     Region: Agenet; smart00743"
                     /db_xref="CDD:214798"
     misc_feature    1158..>1256
                     /gene="LOC139904234"
                     /note="ENT domain; Region: ENT; pfam03735"
                     /db_xref="CDD:461032"
ORIGIN      
        1 agaaaggtgc ggagtataca tcaaatcaaa gcgtatagta acaacaatac caatgtcctc
       61 tcaacaagct attcattcat tcaatcattc attcttcctc tcaactataa caacatttca
      121 attcacaaaa ctctcgattc aaaatttcgt catcgatcac gattctgagg actgtgattt
      181 aagataaagg cgagtttcac atcatgaaat ataaaagagg tagtatagtc gaggtgttga
      241 ccacgggcga ggttccttat cattcttggc gtcgtgctca aatagtttct ggaaaaaggc
      301 acggctacac tgttaggtac gacttgtatt ctggttctgc caaccaggag atagttgaac
      361 atgtatctac gaaatttatt agaccgtgtc ctcctttggt gaaaatttta gaatgtatgc
      421 ctggtgacgt ggtggaagtg tttcacgagc tttcttggaa gatggcagtt gtgtccaagg
      481 ctttcagttg tgacttgttt ctagttagat tagttggatc gttcattgag tttgaagcaa
      541 gtaaatcaga acttcgtgtg cgacaatctt ggcaaaatga tgaatgggta gtgattggca
      601 aggttcacaa aaataacata aatggacggt gcaataagct cttgaagcgt aatttggatt
      661 cagactccta tcagaagcaa atggtcgcca aaggagattc ctatataaaa agtctccagt
      721 ttggtgttca gaatgacaac ttacaggaat cgcatattgt ttcagcgaga accctgaagc
      781 gagggtcacc ctactattgt tctcaagacg aggtgaatga aggatcagcc cagaaattga
      841 gaatcactca aaaagagggc cgacgccttc gagtactgat cgaatcacct gataaggtag
      901 atgctgttcc taactttaaa aaactgccct ctgaagaatg cttacataca gctgacatgg
      961 agaggaaaga tctaagtggc acatacagaa aagtatatga ttatgatgat gatagtgttg
     1021 tgtgctccgt aggtagttgc agtagtaaca gttatagtcg tgatgatatt gaggagaatg
     1081 gaagtcacga tagtgatgcc gagtctgttt gtcaaggggg gcatgaagat attgctcttt
     1141 ataataagga agttgctgca gaaatacata ggctagagtt gcaagcatat cgatatacca
     1201 ttcaggcatt gcatgcatcg ggacccttaa cttgggagaa agaaacaatg gcccaaagtt
     1261 ggagccttgt acaccttgct tatgaatctg taagttgata tcgggtgtgc caccttctat
     1321 gggcatgaga atgtggggct aggctgaatc agatctgcta caaataactg atcagcctca
     1381 tgtacccttg gtatactgcc atggtgaaag tatcactttg ggctgtctgt aatcttctaa
     1441 ttttgtcttt gaaggatgca ggttgatgtt caaatccaat actatacccg cttttgtcct
     1501 tccgtgaagg ttaaacagga aacctgtctc gccaattaat cttgtttcta gcttagccta
     1561 gatcttattc acatcagagg aaggggtgtt tttataggtt tatgggacga aatttatcga
     1621 aagatatcag gtgccacttc acgttgatta attttactga gttgtatttt cattcttagt
     1681 taccatacag cagcagtctt aactttactg agttgaatgt cgttttaata catggt
//
LOCUS       XM_071886171            1590 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904234), transcript variant X4, mRNA.
ACCESSION   XM_071886171
VERSION     XM_071886171.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1590
                     /gene="LOC139904234"
                     /note="uncharacterized LOC139904234; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904234"
     CDS             204..1298
                     /gene="LOC139904234"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742272.1"
                     /db_xref="GeneID:139904234"
                     /translation="MKYKRGSIVEVLTTGEVPYHSWRRAQIVSGKRHGYTVRYDLYSG
                     SANQEIVEHVSTKFIRPCPPLVKILECMPGDVVEVFHELSWKMAVVSKAFSCDLFLVR
                     LVGSFIEFEASKSELRVRQSWQNDEWVVIGKVHKNNINGRCNKLLKRNLDSDSYQKQM
                     VAKGDSYIKSLQFGVQNDNLQESHIVSARTLKRGSPYYCSQDEVNEGSAQKLRITQKE
                     GRRLRVLIESPDKVDAVPNFKKLPSEECLHTADMERKDLSGTYRKVYDYDDDSVVCSV
                     GSCSSNSYSRDDIEENGSHDSDAESVCQGGHEDIALYNKEVAAEIHRLELQAYRYTIQ
                     ALHASGPLTWEKETMAQSWSLVHLAYESVS"
     misc_feature    219..395
                     /gene="LOC139904234"
                     /note="Agenet domain; Region: Agenet; pfam05641"
                     /db_xref="CDD:461700"
     misc_feature    420..578
                     /gene="LOC139904234"
                     /note="Tudor-like domain present in plant sequences;
                     Region: Agenet; smart00743"
                     /db_xref="CDD:214798"
     misc_feature    1158..>1256
                     /gene="LOC139904234"
                     /note="ENT domain; Region: ENT; pfam03735"
                     /db_xref="CDD:461032"
ORIGIN      
        1 agaaaggtgc ggagtataca tcaaatcaaa gcgtatagta acaacaatac caatgtcctc
       61 tcaacaagct attcattcat tcaatcattc attcttcctc tcaactataa caacatttca
      121 attcacaaaa ctctcgattc aaaatttcgt catcgatcac gattctgagg actgtgattt
      181 aagataaagg cgagtttcac atcatgaaat ataaaagagg tagtatagtc gaggtgttga
      241 ccacgggcga ggttccttat cattcttggc gtcgtgctca aatagtttct ggaaaaaggc
      301 acggctacac tgttaggtac gacttgtatt ctggttctgc caaccaggag atagttgaac
      361 atgtatctac gaaatttatt agaccgtgtc ctcctttggt gaaaatttta gaatgtatgc
      421 ctggtgacgt ggtggaagtg tttcacgagc tttcttggaa gatggcagtt gtgtccaagg
      481 ctttcagttg tgacttgttt ctagttagat tagttggatc gttcattgag tttgaagcaa
      541 gtaaatcaga acttcgtgtg cgacaatctt ggcaaaatga tgaatgggta gtgattggca
      601 aggttcacaa aaataacata aatggacggt gcaataagct cttgaagcgt aatttggatt
      661 cagactccta tcagaagcaa atggtcgcca aaggagattc ctatataaaa agtctccagt
      721 ttggtgttca gaatgacaac ttacaggaat cgcatattgt ttcagcgaga accctgaagc
      781 gagggtcacc ctactattgt tctcaagacg aggtgaatga aggatcagcc cagaaattga
      841 gaatcactca aaaagagggc cgacgccttc gagtactgat cgaatcacct gataaggtag
      901 atgctgttcc taactttaaa aaactgccct ctgaagaatg cttacataca gctgacatgg
      961 agaggaaaga tctaagtggc acatacagaa aagtatatga ttatgatgat gatagtgttg
     1021 tgtgctccgt aggtagttgc agtagtaaca gttatagtcg tgatgatatt gaggagaatg
     1081 gaagtcacga tagtgatgcc gagtctgttt gtcaaggggg gcatgaagat attgctcttt
     1141 ataataagga agttgctgca gaaatacata ggctagagtt gcaagcatat cgatatacca
     1201 ttcaggcatt gcatgcatcg ggacccttaa cttgggagaa agaaacaatg gcccaaagtt
     1261 ggagccttgt acaccttgct tatgaatctg taagttgata tcgggtgtgc caccttctat
     1321 gggcatgaga atgtggggct aggctgaatc agatctgcta caaataactg atcagcctca
     1381 tgtacccttg gtatactgcc atggtgaaag tatcactttg ggctgtctgt aatcttctaa
     1441 ttttgtcttt gaaggatgca ggttgatgtt caaatccaat actatacccg cttttgtcct
     1501 tccgtgaagg ttaaacaggt tgacgatctt tcggaccgac ttactacctg catacgtttc
     1561 atatcgactt ttactgctta ttcactgtga
//
LOCUS       XM_071886172            3474 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium channel AKT1-like
            (LOC139904235), transcript variant X1, mRNA.
ACCESSION   XM_071886172
VERSION     XM_071886172.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3474
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3474
                     /gene="LOC139904235"
                     /note="potassium channel AKT1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 43
                     Proteins"
                     /db_xref="GeneID:139904235"
     CDS             22..2685
                     /gene="LOC139904235"
                     /codon_start=1
                     /product="potassium channel AKT1-like"
                     /protein_id="XP_071742273.1"
                     /db_xref="GeneID:139904235"
                     /translation="MAEMFDTNVKTSAFRVSMCGGAQELEQMSRDGSQYSLNTAILPS
                     LGARSNRRVKLRNFIISPYDRRYRAWETYLVVLVLYTAWVSPFEFGFFKKPQQPLSII
                     DNVVNGFFGIDIILTFFLAYLDRSTYLLVDDRKKIAWRYTSSWLVFDVISTIPAELVR
                     KISSGNFQPYGLFNMCRLWRLRRVSSMFARLEKDRNFNYFWVRCAKLIAVTLFAVHCA
                     GCFYYYLAAHYPNPGKTWIGYGNENFEKESLWIRYVTSMYWSITTLTTVGYGDLHAQN
                     RREMIFVICYMLFNLGMTSYLIGNMTNLVVHGTSKTRHFRDTIQAASSFAQRNQLPVR
                     LQDQMLAHLCLKFRTDSEGLQQQESLDSLPKAIRSSISHFLFYSLLDKAYLFHGVSND
                     LLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVELVVIKNGTEQVVGEAKTGD
                     LCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIIQANVGDGTIIMNNLLKHLKDM
                     NDPLMEGVLMETENMLARGRMDLPLSLCFATLRGDDLLLQKLLKRGLDPNESDNNGRT
                     ALHIASSKGNVNCVLLLLDYGADPNSRDSEGNVPMWEAILGNHEPVVAILKDNNASVL
                     SGDVGQFSCIAAEQNRLDLLKQIISLGGDVTLPKNNGSTALHVAVCEGNIEMVKFLLT
                     QGANVDKPDDHGWTPRDLADQQGHHDIRNLFLSVKPTDDYSQLTKTSSFMPFQRAESR
                     HVQFIGRFKSDPMIRPASQYGDDGPLSQPPQRRRVNNFHNSLFGIMSNNHDDERNVDL
                     VLPRPQTGKENPRRVIISCPEKGDVQGKLVLLPQSFQELLNIGVKKFGFLPSRVLNKE
                     GAEIDEIELIRDGDHLVFQSDGGHADGDDQR"
     misc_feature    79..2652
                     /gene="LOC139904235"
                     /note="Voltage-dependent potassium channel; Provisional;
                     Region: PLN03192"
                     /db_xref="CDD:215625"
     misc_feature    order(1708..1710,1714..1716,1726..1731,1738..1746,
                     1750..1755,1765..1767,1774..1776,1801..1803,1807..1809,
                     1813..1815,1846..1848,1921..1923,1930..1938,1942..1947,
                     1957..1959,1966..1968,1993..1995,1999..2001,2005..2007,
                     2017..2022,2029..2037,2041..2046,2056..2058,2065..2067,
                     2092..2094)
                     /gene="LOC139904235"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    1708..1803
                     /gene="LOC139904235"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1807..1995
                     /gene="LOC139904235"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1999..2094
                     /gene="LOC139904235"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 gtgattggat atcttctaaa aatggcggaa atgtttgata caaatgtgaa gacgagtgcg
       61 tttagggttt caatgtgtgg cggtgctcaa gaactggaac aaatgtctag agacggcagt
      121 caatacagtc tcaacactgc tattttacct tctctcggtg ctcgtagtaa tcgccgcgtt
      181 aaacttcgca atttcattat atctccttac gatcgccgtt acagggcatg ggagacatat
      241 ctagtagtgt tggtcctcta tactgcttgg gtgtccccat tcgaatttgg attttttaag
      301 aagccacaac agcctctctc gataattgat aatgttgtca atggattctt tggtattgat
      361 attatcctta cattcttctt agcttactta gataggagta cataccttct tgtggatgac
      421 cgaaaaaaaa ttgcttggag atatacaagt tcctggttgg tattcgatgt catttccaca
      481 attcctgctg aactggttcg caagatctct agtggtaatt ttcaacccta tggcttattc
      541 aacatgtgta gactctggcg actgcgcaga gttagttcca tgtttgccag attggagaaa
      601 gataggaact ttaactactt ctgggtccgg tgtgccaagc ttattgctgt cactcttttt
      661 gcggtacact gtgctgggtg cttctactat taccttgctg ctcattaccc aaatccgggt
      721 aagacttgga ttgggtacgg taatgagaat tttgagaagg agagtttgtg gatccgctat
      781 gtgacatcca tgtattggtc aattacgact cttacaaccg tgggctatgg tgatttgcac
      841 gctcagaata gaagggaaat gatattcgta atatgttaca tgcttttcaa tcttggaatg
      901 acgtcatatt tgataggaaa tatgaccaac ttggttgtgc atggaaccag caaaactagg
      961 cattttagag ataccattca agctgcctca agttttgcac agagaaacca gttaccggtc
     1021 cgtttacaag atcagatgct tgcacacttg tgcttgaagt tcagaacaga ttcagagggg
     1081 cttcaacaac aagagagtct cgattcactt ccaaaagcca ttcggtcaag catttctcat
     1141 tttcttttct actcactttt ggataaggcc tacttatttc atggagtgtc aaacgactta
     1201 ctttttcagt tggtttctga aatgaaagcc gaatactttc caccaaagga agatgtcatt
     1261 ttgcagaatg aagcaccaac agatttctat attcttgtta caggagcagt tgaactggtg
     1321 gttataaaaa atggaaccga gcaggttgtt ggagaagcta aaaccggtga tctttgtggt
     1381 gagattggtg ttctttgtta cagaccacag ctgtttacag tccgcaccaa gcgcttaagc
     1441 cagttactac gtttgaaccg tactacattc ttgaacatca ttcaagcaaa tgttggtgat
     1501 gggaccatta tcatgaacaa tctgcttaag catttaaaag acatgaatga tccacttatg
     1561 gagggagttc tgatggaaac ggagaacatg ttggctcgcg gtaggatgga cttgccactg
     1621 agcttatgct ttgctacact taggggagac gatcttttgc tacagaagtt gttaaaacgg
     1681 ggacttgatc ctaatgaatc tgacaacaat ggaagaacag ctctccacat agcgtcgtca
     1741 aaaggaaacg taaattgtgt actcctgcta ctagattatg gagctgatcc gaatagtaga
     1801 gattcagaag ggaatgttcc aatgtgggag gccatactgg ggaaccatga acccgttgtc
     1861 gctatcttga aagataataa cgcttcagta ttatctggtg atgttggaca gttttcttgc
     1921 attgccgccg aacaaaacag gttggactta cttaaacaaa tcattagcct tggaggagac
     1981 gtcacacttc ctaaaaacaa cggttcaacg gctctgcatg tggctgtttg tgaaggtaac
     2041 attgagatgg tgaaatttct attaactcaa ggagccaatg tcgacaaacc agatgatcac
     2101 ggttggactc ctagagacct ggctgaccaa caaggtcacc acgatataag gaaccttttc
     2161 ctatcggtca agccaactga cgactactcc cagttgacaa aaacttcgtc attcatgcca
     2221 tttcagagag ctgagtcgcg acacgttcag tttattggga ggttcaaaag tgatcccatg
     2281 ataagacccg cttcccaata cggggacgat ggtcctttga gtcaacctcc ccaaagacgg
     2341 agggttaata attttcataa ttctcttttt gggataatgt caaataatca cgatgacgag
     2401 agaaacgttg acttggtctt gcctaggcca caaacaggga aagagaatcc aaggagggtg
     2461 atcattagct gtcctgaaaa aggagatgtt caggggaagc ttgtactttt accacaaagc
     2521 ttccaagagt tgcttaacat tggcgttaag aagtttggtt tcttgccatc gagagtcttg
     2581 aacaaagagg gagcagaaat cgatgaaata gagctaattc gagatggtga tcacttggtt
     2641 tttcagagtg atggtgggca tgcagatggt gatgatcaaa gataacacca ctagtgtctg
     2701 gtccatgtaa ttgttttaaa aatcttaatc tacgacaatt gacgaaagtg aagtaagtaa
     2761 tgcatatata ctggtgtata ggacaatctt tctattatgt gaaagatata atcttttttc
     2821 cctttttatt tgaaaaacac agtacatccc attgatcgtt tttctaacat atgttgttaa
     2881 gctccattga gatcgttctc tgtttgtaac aagcctagtc ccaagcccgg tacatgactt
     2941 ggtttaaaaa gtctaaacca gatagttcat agcaggtaac tgtaccagtt aggccagaga
     3001 ttgttgaagg ccatggtcat atttcataga atataatcat gtccatatcc catccaatat
     3061 gtagcactga caaagttcac cacataacat caacaggtgt gttgaaagac aaacttgtaa
     3121 aacaaaaggt aatgttatat tacacaagga aggagtatgc attcatattc tgagtataat
     3181 ctacagagct tcatataagt attagctttt caggttcaac ctacaatttc aaagctgtca
     3241 tcacatcata tatgggattg aggactaccc aaccaattgt gttgagaaag gcgtgactga
     3301 cgagttatct ctttacaaaa gctttagcat ctttaggcgt tccaagtgct ctggatccag
     3361 ttttggagga gtgtaacacc ctttaagatc ctctactaca tactcctgcc acaaagagtt
     3421 aacaaccttt agaaaacatt caaaatcatt tagaggtcac cttacaagat ttta
//
LOCUS       XR_011778708            2772 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium channel AKT1-like
            (LOC139904235), transcript variant X2, misc_RNA.
ACCESSION   XR_011778708
VERSION     XR_011778708.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2772
                     /gene="LOC139904235"
                     /note="potassium channel AKT1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 43
                     Proteins"
                     /db_xref="GeneID:139904235"
     misc_RNA        1..2772
                     /gene="LOC139904235"
                     /product="potassium channel AKT1-like, transcript variant
                     X2"
                     /db_xref="GeneID:139904235"
ORIGIN      
        1 gtgattggat atcttctaaa aatggcggaa atgtttgata caaatgtgaa gacgagtgcg
       61 tttagggttt caatgtgtgg cggtgctcaa gaactggaac aaatgtctag agacggcagt
      121 caatacagtc tcaacactgc tattttacct tctctcggtg ctcgtagtaa tcgccgcgtt
      181 aaacttcgca atttcattat atctccttac gatcgccgtt acagggcatg ggagacatat
      241 ctagtagtgt tggtcctcta tactgcttgg gtgtccccat tcgaatttgg attttttaag
      301 aagccacaac agcctctctc gataattgat aatgttgtca atggattctt tggtattgat
      361 attatcctta cattcttctt agcttactta gataggagta cataccttct tgtggatgac
      421 cgaaaaaaaa ttgcttggag atatacaagt tcctggttgg tattcgatgt catttccaca
      481 attcctgctg aactggttcg caagatctct agtggtaatt ttcaacccta tggcttattc
      541 aacatgtgta gactctggcg actgcgcaga gttagttcca tgtttgccag attggagaaa
      601 gataggaact ttaactactt ctgggtccgg tgtgccaagc ttattgctgt cactcttttt
      661 gcggtacact gtgctgggtg cttctactat taccttgctg ctcattaccc aaatccgggt
      721 aagacttgga ttgggtacgg taatgagaat tttgagaagg agagtttgtg gatccgctat
      781 gtgacatcca tgtattggtc aattacgact cttacaaccg tgggctatgg tgatttgcac
      841 gctcagaata gaagggaaat gatattcgta atatgttaca tgcttttcaa tcttggaatg
      901 acgtcatatt tgataggaaa tatgaccaac ttggttgtgc atggaaccag caaaactagg
      961 cattttagag ataccattca agctgcctca agttttgcac agagaaacca gttaccggtc
     1021 cgtttacaag atcagatgct tgcacacttg tgcttgaagt tcagaacaga ttcagagggg
     1081 cttcaacaac aagagagtct cgattcactt ccaaaagcca ttcggtcaag catttctcat
     1141 tttcttttct actcactttt ggataaggcc tacttatttc atggagtgtc aaacgactta
     1201 ctttttcagt tggtttctga aatgaaagcc gaatactttc caccaaagga agatgtcatt
     1261 ttgcagaatg aagcaccaac agatttctat attcttgtta caggagcagt tgaactggtg
     1321 gttataaaaa atggaaccga gcaggttgtt ggagaagcta aaaccggtga tctttgtggt
     1381 gagattggtg ttctttgtta cagaccacag ctgtttacag tccgcaccaa gcgcttaagc
     1441 cagttactac gtttgaaccg tactacattc ttgaacatca ttcaagcaaa tgttggtgat
     1501 gggaccatta tcatgaacaa tctgcttaag catttaaaag acatgaatga tccacttatg
     1561 gagggagttc tgatggaaac ggagaacatg ttggctcgcg gtaggatgga cttgccactg
     1621 agcttatgct ttgctacact taggggagac gatcttttgc tacagaagtt gttaaaacgg
     1681 ggacttgatc ctaatgaatc tgacaacaat ggaagaacag ctctccacat agcgtcgtca
     1741 aaaggaaacg taaattgtgt actcctgcta ctagattatg gagctgatcc gaatagtaga
     1801 gattcagaag ggaatgttcc aatgtgggag gccatactgg ggaaccatga acccgttgtc
     1861 gctatcttga aagataataa cgcttcagta ttatctggtg atgttggaca gttttcttgc
     1921 attgccgccg aacaaaacag gttggactta cttaaacaaa tcattagcct tggaggagac
     1981 gtcacacttc ctaaaaacaa cggttcaacg gctctgcatg tggctgtttg tgaaggtaac
     2041 attgagatgg tgaaatttct attaactcaa ggagccaatg tcgacaaacc agatgatcac
     2101 ggttggactc ctagagacct ggctgaccaa caaggtcacc acgatataag gaaccttttc
     2161 ctatcggtca agccaactga cgactactcc cagttgacaa aaacttcgtc attcatgcca
     2221 tttcagagag ctgagtcgcg acacgttcag tttattggga ggttcaaaag tgatcccatg
     2281 ataagacccg cttcccaata cggggacgat ggtcctttga gtcaacctcc ccaaagacgg
     2341 agggttaata attttcataa ttctcttttt gggataatgt caaataatca cgatgacgag
     2401 agaaacgttg acttggtctt gcctaggcca caaacaggga aagagaatcc aaggagggtg
     2461 atcattagct gtcctgaaaa aggagatgtt caggggaagc ttgtactttt accacaaagc
     2521 ttccaagagt tgcttaacat tggcgttaag aagtttggtt tcttgccatc gagagtcttg
     2581 aacaaagagg gagcagaaat cgatgaaata gagctaattc gagatggtga tcacttggtt
     2641 tttcagagtg atggtgggca tgcagatggt gatgatcaaa gataacacca ctagtgtctg
     2701 gtccatgtaa ttgttttaaa aatcttaatc tacgacaatt gacgaaagtg aagtaactgt
     2761 accagttagg cc
//
LOCUS       XM_071886173            1287 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904236), transcript variant X1, mRNA.
ACCESSION   XM_071886173
VERSION     XM_071886173.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1287
                     /gene="LOC139904236"
                     /note="uncharacterized LOC139904236; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904236"
     CDS             125..1072
                     /gene="LOC139904236"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742274.1"
                     /db_xref="GeneID:139904236"
                     /translation="MNGELQLEEARGLNNPSDSDPLLPNHQNVDSQSLITSYTQSPAG
                     ANINSDDDVEGGSMIACRICLECDGEEDDDLISPCMCKGTQQFVHRSCLDHWRSIKEG
                     SAFSHCTTCKAQFHLRVINLEENSWRKIKFRLFVARDVCLVFLAVQTVIGLMGGLAYL
                     ADKDGSFRDSFNDSWDRILSRHPIPFYYCIGVLVFFVLLGFFGIILHCSSFNSDPRMA
                     GCQNCCYGWGVLDCFPASMEACFALVIVFVVIFAILGIAYGFLAATMAIQRIWQRHYH
                     ILTKRELTQEYVVEDLKGCYTPPKLDPEHLERLKMLKLL"
     misc_feature    305..460
                     /gene="LOC139904236"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); Region:
                     RING_CH-C4HC3_MARCH; cd16495"
                     /db_xref="CDD:438158"
     polyA_site      1287
                     /gene="LOC139904236"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacgtgccgt ctagtagata agtatctaaa actggttcaa tccaacgtcc tttcaccata
       61 ttttcttcca caaaaatttc agggttctat tatttgatta ggtttagaaa ctcaaattgt
      121 ttaaatgaac ggagaattac agctagaaga agctaggggt ttaaataacc ctagcgattc
      181 agatcctttg cttccgaatc atcaaaacgt tgattctcaa tcgctcataa catcgtatac
      241 gcaatcgcct gctggtgcga acataaatag tgatgatgat gttgaagggg gttcaatgat
      301 tgcttgtcga atttgcctag aatgcgatgg agaggaagat gatgatctga tatctccatg
      361 tatgtgcaaa ggcacccagc agtttgtgca ccgttcatgc cttgatcatt ggcggtctat
      421 taaggaaggg tctgcctttt cacattgcac tacttgcaaa gctcagtttc atctaagagt
      481 catcaactta gaagaaaact catggcgcaa aataaaattc agactatttg ttgccagaga
      541 tgtttgcctt gtgtttttgg ctgtacaaac agtgatcgga ttgatgggag ggctagcata
      601 tcttgctgac aaagacggat cttttagaga ttcatttaat gacagttggg accgtatatt
      661 gtcaagacac ccaataccat tctactattg tataggggtt cttgtgtttt ttgtattgct
      721 ggggtttttt gggattatac tacactgctc ttcattcaat agcgatccca ggatggctgg
      781 ttgccaaaac tgctgttatg gttggggcgt gttggactgt tttccagcat caatggaggc
      841 atgctttgct ctggttatag tttttgtggt catatttgca attcttggta ttgcgtatgg
      901 ctttcttgct gccaccatgg ctattcagag gatctggcag agacactacc acatcctcac
      961 caaaagagaa ctgacacagg agtatgtagt agaggatctt aaagggtgtt acactcctcc
     1021 aaaactggat ccagagcact tggaacgcct aaagatgcta aagcttttgt aaagagataa
     1081 ctcgtcagtc acgcctttct caacacaatt ggttgggtag tcctcaatcc catatatgat
     1141 gtgatgacag ctttgaaatt gtaggttgaa cctgaaaagc taatacttat atgaagctct
     1201 gtagattata ctcagaatat gaatgcatac tccttccttg tgtaatataa cattaccttt
     1261 tgttttacaa gtttgtcttt caacaca
//
LOCUS       XM_071886174            1269 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904236), transcript variant X2, mRNA.
ACCESSION   XM_071886174
VERSION     XM_071886174.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1269
                     /gene="LOC139904236"
                     /note="uncharacterized LOC139904236; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904236"
     CDS             107..1054
                     /gene="LOC139904236"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742275.1"
                     /db_xref="GeneID:139904236"
                     /translation="MNGELQLEEARGLNNPSDSDPLLPNHQNVDSQSLITSYTQSPAG
                     ANINSDDDVEGGSMIACRICLECDGEEDDDLISPCMCKGTQQFVHRSCLDHWRSIKEG
                     SAFSHCTTCKAQFHLRVINLEENSWRKIKFRLFVARDVCLVFLAVQTVIGLMGGLAYL
                     ADKDGSFRDSFNDSWDRILSRHPIPFYYCIGVLVFFVLLGFFGIILHCSSFNSDPRMA
                     GCQNCCYGWGVLDCFPASMEACFALVIVFVVIFAILGIAYGFLAATMAIQRIWQRHYH
                     ILTKRELTQEYVVEDLKGCYTPPKLDPEHLERLKMLKLL"
     misc_feature    287..442
                     /gene="LOC139904236"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); Region:
                     RING_CH-C4HC3_MARCH; cd16495"
                     /db_xref="CDD:438158"
     polyA_site      1269
                     /gene="LOC139904236"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccacgtgccg tctagtagat aagtatctaa aactggttca atccaacgtc ctttcaccat
       61 attttcttcc acaaaaattt caggtttaga aactcaaatt gtttaaatga acggagaatt
      121 acagctagaa gaagctaggg gtttaaataa ccctagcgat tcagatcctt tgcttccgaa
      181 tcatcaaaac gttgattctc aatcgctcat aacatcgtat acgcaatcgc ctgctggtgc
      241 gaacataaat agtgatgatg atgttgaagg gggttcaatg attgcttgtc gaatttgcct
      301 agaatgcgat ggagaggaag atgatgatct gatatctcca tgtatgtgca aaggcaccca
      361 gcagtttgtg caccgttcat gccttgatca ttggcggtct attaaggaag ggtctgcctt
      421 ttcacattgc actacttgca aagctcagtt tcatctaaga gtcatcaact tagaagaaaa
      481 ctcatggcgc aaaataaaat tcagactatt tgttgccaga gatgtttgcc ttgtgttttt
      541 ggctgtacaa acagtgatcg gattgatggg agggctagca tatcttgctg acaaagacgg
      601 atcttttaga gattcattta atgacagttg ggaccgtata ttgtcaagac acccaatacc
      661 attctactat tgtatagggg ttcttgtgtt ttttgtattg ctggggtttt ttgggattat
      721 actacactgc tcttcattca atagcgatcc caggatggct ggttgccaaa actgctgtta
      781 tggttggggc gtgttggact gttttccagc atcaatggag gcatgctttg ctctggttat
      841 agtttttgtg gtcatatttg caattcttgg tattgcgtat ggctttcttg ctgccaccat
      901 ggctattcag aggatctggc agagacacta ccacatcctc accaaaagag aactgacaca
      961 ggagtatgta gtagaggatc ttaaagggtg ttacactcct ccaaaactgg atccagagca
     1021 cttggaacgc ctaaagatgc taaagctttt gtaaagagat aactcgtcag tcacgccttt
     1081 ctcaacacaa ttggttgggt agtcctcaat cccatatatg atgtgatgac agctttgaaa
     1141 ttgtaggttg aacctgaaaa gctaatactt atatgaagct ctgtagatta tactcagaat
     1201 atgaatgcat actccttcct tgtgtaatat aacattacct tttgttttac aagtttgtct
     1261 ttcaacaca
//
LOCUS       XM_071886175             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable histone H2A variant
            3 (LOC139904237), mRNA.
ACCESSION   XM_071886175
VERSION     XM_071886175.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139904237"
                     /note="probable histone H2A variant 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 29 Proteins"
                     /db_xref="GeneID:139904237"
     CDS             98..502
                     /gene="LOC139904237"
                     /codon_start=1
                     /product="probable histone H2A variant 3"
                     /protein_id="XP_071742276.1"
                     /db_xref="GeneID:139904237"
                     /translation="MSGKGAKGLIMGKNAALNKEKDKKKATSRSSRAGLQFPVGRIHR
                     LLKQRTTANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRG
                     DEELDTLIKGTIAGGGVIPHIHKSLINKSTND"
     misc_feature    98..499
                     /gene="LOC139904237"
                     /note="histone H2A; Provisional; Region: PLN00154"
                     /db_xref="CDD:177756"
ORIGIN      
        1 taaaacacaa ttccgccgcc tttgcaattc taccgtctcc acttccaaaa tcaaaaccca
       61 atttctcaat ttttgttttc gtcaaaattg attaacaatg tcaggaaaag gagcaaaagg
      121 tttgatcatg ggcaagaatg cggcacttaa caaagaaaag gacaaaaaga aagctacttc
      181 tcgatcatct cgcgctggtc ttcagttccc agttgggcgt atccatcgtt tactaaaaca
      241 acggaccact gcaaatggta gggtgggggc cacagcagcc gtttactctg cagccatctt
      301 ggaatacttg acagcagagg tgcttgagtt ggctgggaac gcaagcaagg atcttaaagt
      361 gaaacgtatt acaccaaggc atttacagct tgcaattcga ggtgatgaag aacttgatac
      421 tctgattaaa ggaaccatag ctggtggtgg agtcattcct cacatccaca agtcactcat
      481 caacaaatct actaatgatt agattcgtga tttgattttt gttattgttt gatgatcact
      541 aattcttgtt gattgttgct tagttgatgt ggaattcaat ggttgatttt tcagatatat
      601 gat
//
LOCUS       XM_071886176            1880 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904238), transcript variant X1, mRNA.
ACCESSION   XM_071886176
VERSION     XM_071886176.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1880
                     /gene="LOC139904238"
                     /note="uncharacterized LOC139904238; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904238"
     CDS             47..1192
                     /gene="LOC139904238"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742277.1"
                     /db_xref="GeneID:139904238"
                     /translation="MAVTHFTNHILQPISGQQRLKPPLQNRIIPDDNTTQIRQNLVVK
                     HSLKSSKVEQSFKKSEVDVQRLVDFLYEDLPHVFDDHGLDWTAYEKDIKFQDPITKHD
                     NINGYLFYISLLKLLFSANLQIHWIKQTGDYEITARWTTEMRYYGLPWKPLLVVTGTS
                     VLGINPENGKFCSHMDYWDSVKNNDYLSFESLVDIMKQMCSYKTPELVTPEYQTLKRT
                     TAYEVRNYSPFIVVETQNNKLAGSTGYNNEAGYIYGEHLRKEKIPMTIPVFTQSFDPG
                     NFRISIQIVHSSKRNLNGLQDSMNRKNITSRRSFQEGFAAVLEFGGKPTEDIVREKEN
                     LLRASILSEGLKPKDGCLLACYYDPDKTNLFMMINEVLIWLEEFVLD"
     misc_feature    236..568
                     /gene="LOC139904238"
                     /note="Nuclear transport factor 2 (NTF2-like) superfamily.
                     This family includes members of the NTF2 family,
                     Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
                     and the beta subunit of Ring hydroxylating dioxygenases.
                     This family is a classic example of...; Region: NTF2_like;
                     cl09109"
                     /db_xref="CDD:471850"
     misc_feature    671..1168
                     /gene="LOC139904238"
                     /note="SOUL heme-binding protein; Region: SOUL; pfam04832"
                     /db_xref="CDD:461449"
ORIGIN      
        1 ttgtgtgtct tgctgatatt cattactgta caatatacac acacaaatgg ctgttacaca
       61 tttcacaaac cacatacttc agccaatttc cggtcaacaa agacttaaac caccactgca
      121 gaatagaatt ataccagatg ataatactac tcaaattaga caaaatttag tagtaaaaca
      181 tagcttgaaa tcatcaaaag ttgagcaaag cttcaaaaaa tcagaagttg atgttcaacg
      241 gttggtggat tttttgtatg aggaccttcc acatgtcttt gatgatcatg gacttgattg
      301 gaccgcgtat gagaaagata tcaaatttca ggatccgatt accaaacatg acaatataaa
      361 cggatatttg ttttacattt cattgttgaa gctgctcttc tctgctaatc tacagattca
      421 ttggattaaa cagacaggag attatgaaat tactgcaagg tggactacgg aaatgagata
      481 ctatggtcta ccatggaagc cattgttggt ggttacaggt acttctgtat tgggcatcaa
      541 tccagaaaat ggaaagtttt gcagtcacat ggattattgg gattctgtaa agaacaatga
      601 ctacctttcc tttgaaagtc tcgtggatat aatgaaacaa atgtgtagct acaagactcc
      661 agagttagta acacccgaat atcaaactct gaaaagaacc acagcatacg aggtacgcaa
      721 ctacagccca ttcatagtcg tcgaaacaca aaacaacaaa cttgctggat caacaggata
      781 taacaatgaa gctgggtata tatatgggga gcacttgagg aaggaaaaaa tacctatgac
      841 aattccagtt ttcactcaat catttgatcc tggaaatttc agaatatcca tccagatagt
      901 tcattcatca aaaagaaact taaatggttt acaagattca atgaacagaa aaaacattac
      961 ttcgaggagg agctttcaag aagggttcgc agctgtatta gagttcggtg gcaaacctac
     1021 agaagatatc gttcgtgaaa aagagaattt gctaagggct agtattcttt ctgaaggtct
     1081 taagcctaaa gacggatgtt tactagcttg ctactatgat cctgacaaaa caaatctttt
     1141 tatgatgata aatgaggttc ttatttggct tgaggaattc gtgttggact agttctgttg
     1201 cgcatgatca atcccatcta cagggattgg aattctataa taaaataaaa aaaaaaaaaa
     1261 aaaaaaaaaa gcacaaaaac tgtagcagaa caccagttgt atgtttatat tttcacatat
     1321 tttatgaaaa tatgaacaaa actgtaacag caatctgtat atcatacttt ctgttacgat
     1381 gtagtaatta aaataattcc gatgtcggtg gaagaaggaa aaatagggtt gttctctttg
     1441 tacgcttgta cgaagacaac attgtatctt gtgtctacat ggacatgaaa tcaaatctgt
     1501 ttgctgattc caaaaactgt ggacaatttt gtctcagttt tcaaatacaa gtttctatgt
     1561 aatgaatcca ccatcagata tggttccttt agtcagagta aacggctact gtggctccaa
     1621 ccgaatgaaa cattatgttt gttttagcgg ttacaagcag taacatttaa aaaaagacac
     1681 tttgtgaatg ttatcaggaa tatgaatgtt atttcatcta gcgttttctg gtcaaaataa
     1741 tacggagtaa catttatcac aaagtgtctt ttttaaattg tttagatttt tacgtgatct
     1801 taatgtttgt aaaaaaaaaa aaaaaaaatt taaagaaaag caaaaaaaaa tttacttccc
     1861 gcttcccaaa taaatctatt
//
LOCUS       XM_071886177            1286 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904238), transcript variant X2, mRNA.
ACCESSION   XM_071886177
VERSION     XM_071886177.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1286
                     /gene="LOC139904238"
                     /note="uncharacterized LOC139904238; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904238"
     CDS             48..1187
                     /gene="LOC139904238"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742278.1"
                     /db_xref="GeneID:139904238"
                     /translation="MAVTHFTNHILQPISGQQRLKPPLQNRIIPDDNTTQIRQNLVVK
                     HSLKSSKVEQSFKKSEVDVQRLVDFLYEDLPHVFDDHGLDWTAYEKDIKFQDPITKHD
                     NINGYLFYISLLKLLFSANLQIHWIKQTGDYEITARWTTEMRYYGLPWKPLLVVTGTS
                     VLGINPENGKFCSHMDYWDSVKNNDYLSFESLVDIMKQMCSYKTPELVTPEYQTLKRT
                     TAYEVRNYSPFIVVETQNNKLAGSTGYNNEAGYIYGEHLRKEKIPMTIPVFTQSFDPG
                     NFRISIQIVHSSKRNLNGLQDSMNRKNITSRRSFQEGFAAVLEFGGKPTEDIVREKEN
                     LLRASILSEGLKPKDGCLLACYYDPDKTNLFMMESYNGKITSYYY"
     misc_feature    237..569
                     /gene="LOC139904238"
                     /note="Nuclear transport factor 2 (NTF2-like) superfamily.
                     This family includes members of the NTF2 family,
                     Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
                     and the beta subunit of Ring hydroxylating dioxygenases.
                     This family is a classic example of...; Region: NTF2_like;
                     cl09109"
                     /db_xref="CDD:471850"
     misc_feature    672..1124
                     /gene="LOC139904238"
                     /note="SOUL heme-binding protein; Region: SOUL; pfam04832"
                     /db_xref="CDD:461449"
ORIGIN      
        1 tttgtgtgtc ttgctgatat tcattactgt acaatataca cacacaaatg gctgttacac
       61 atttcacaaa ccacatactt cagccaattt ccggtcaaca aagacttaaa ccaccactgc
      121 agaatagaat tataccagat gataatacta ctcaaattag acaaaattta gtagtaaaac
      181 atagcttgaa atcatcaaaa gttgagcaaa gcttcaaaaa atcagaagtt gatgttcaac
      241 ggttggtgga ttttttgtat gaggaccttc cacatgtctt tgatgatcat ggacttgatt
      301 ggaccgcgta tgagaaagat atcaaatttc aggatccgat taccaaacat gacaatataa
      361 acggatattt gttttacatt tcattgttga agctgctctt ctctgctaat ctacagattc
      421 attggattaa acagacagga gattatgaaa ttactgcaag gtggactacg gaaatgagat
      481 actatggtct accatggaag ccattgttgg tggttacagg tacttctgta ttgggcatca
      541 atccagaaaa tggaaagttt tgcagtcaca tggattattg ggattctgta aagaacaatg
      601 actacctttc ctttgaaagt ctcgtggata taatgaaaca aatgtgtagc tacaagactc
      661 cagagttagt aacacccgaa tatcaaactc tgaaaagaac cacagcatac gaggtacgca
      721 actacagccc attcatagtc gtcgaaacac aaaacaacaa acttgctgga tcaacaggat
      781 ataacaatga agctgggtat atatatgggg agcacttgag gaaggaaaaa atacctatga
      841 caattccagt tttcactcaa tcatttgatc ctggaaattt cagaatatcc atccagatag
      901 ttcattcatc aaaaagaaac ttaaatggtt tacaagattc aatgaacaga aaaaacatta
      961 cttcgaggag gagctttcaa gaagggttcg cagctgtatt agagttcggt ggcaaaccta
     1021 cagaagatat cgttcgtgaa aaagagaatt tgctaagggc tagtattctt tctgaaggtc
     1081 ttaagcctaa agacggatgt ttactagctt gctactatga tcctgacaaa acaaatcttt
     1141 ttatgatgga atcatacaat gggaagatca catcatatta ttactaaaag atggatattc
     1201 aagatatgta taatgagtag caatcataca atgagaagat cacgccatat tactaaaaga
     1261 tgaatattca agttatgtat catgag
//
LOCUS       XM_071886178            1377 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904238), transcript variant X3, mRNA.
ACCESSION   XM_071886178
VERSION     XM_071886178.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1377
                     /gene="LOC139904238"
                     /note="uncharacterized LOC139904238; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904238"
     CDS             48..1184
                     /gene="LOC139904238"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742279.1"
                     /db_xref="GeneID:139904238"
                     /translation="MAVTHFTNHILQPISGQQRLKPPLQNRIIPDDNTTQIRQNLVVK
                     HSLKSSKVEQSFKKSEVDVQRLVDFLYEDLPHVFDDHGLDWTAYEKDIKFQDPITKHD
                     NINGYLFYISLLKLLFSANLQIHWIKQTGDYEITARWTTEMRYYGLPWKPLLVVTGTS
                     VLGINPENGKFCSHMDYWDSVKNNDYLSFESLVDIMKQMCSYKTPELVTPEYQTLKRT
                     TAYEVRNYSPFIVVETQNNKLAGSTGYNNEAGYIYGEHLRKEKIPMTIPVFTQSFDPG
                     NFRISIQIVHSSKRNLNGLQDSMNRKNITSRRSFQEGFAAVLEFGGKPTEDIVREKEN
                     LLRASILSEGLKPKDGCLLACYYDPDKTNLFMMQSYNEKITPYY"
     misc_feature    237..569
                     /gene="LOC139904238"
                     /note="Nuclear transport factor 2 (NTF2-like) superfamily.
                     This family includes members of the NTF2 family,
                     Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
                     and the beta subunit of Ring hydroxylating dioxygenases.
                     This family is a classic example of...; Region: NTF2_like;
                     cl09109"
                     /db_xref="CDD:471850"
     misc_feature    672..1124
                     /gene="LOC139904238"
                     /note="SOUL heme-binding protein; Region: SOUL; pfam04832"
                     /db_xref="CDD:461449"
ORIGIN      
        1 tttgtgtgtc ttgctgatat tcattactgt acaatataca cacacaaatg gctgttacac
       61 atttcacaaa ccacatactt cagccaattt ccggtcaaca aagacttaaa ccaccactgc
      121 agaatagaat tataccagat gataatacta ctcaaattag acaaaattta gtagtaaaac
      181 atagcttgaa atcatcaaaa gttgagcaaa gcttcaaaaa atcagaagtt gatgttcaac
      241 ggttggtgga ttttttgtat gaggaccttc cacatgtctt tgatgatcat ggacttgatt
      301 ggaccgcgta tgagaaagat atcaaatttc aggatccgat taccaaacat gacaatataa
      361 acggatattt gttttacatt tcattgttga agctgctctt ctctgctaat ctacagattc
      421 attggattaa acagacagga gattatgaaa ttactgcaag gtggactacg gaaatgagat
      481 actatggtct accatggaag ccattgttgg tggttacagg tacttctgta ttgggcatca
      541 atccagaaaa tggaaagttt tgcagtcaca tggattattg ggattctgta aagaacaatg
      601 actacctttc ctttgaaagt ctcgtggata taatgaaaca aatgtgtagc tacaagactc
      661 cagagttagt aacacccgaa tatcaaactc tgaaaagaac cacagcatac gaggtacgca
      721 actacagccc attcatagtc gtcgaaacac aaaacaacaa acttgctgga tcaacaggat
      781 ataacaatga agctgggtat atatatgggg agcacttgag gaaggaaaaa atacctatga
      841 caattccagt tttcactcaa tcatttgatc ctggaaattt cagaatatcc atccagatag
      901 ttcattcatc aaaaagaaac ttaaatggtt tacaagattc aatgaacaga aaaaacatta
      961 cttcgaggag gagctttcaa gaagggttcg cagctgtatt agagttcggt ggcaaaccta
     1021 cagaagatat cgttcgtgaa aaagagaatt tgctaagggc tagtattctt tctgaaggtc
     1081 ttaagcctaa agacggatgt ttactagctt gctactatga tcctgacaaa acaaatcttt
     1141 ttatgatgca atcatacaat gagaagatca cgccatatta ctaaaagatg aatattcaag
     1201 ttatgtatca tgagctactg aagaaacact gaattaaaaa aaaatgtcaa atgtagactt
     1261 gccaagaaga cacgtggttg gctctatgtt ggatgaattc gttcgaagat tctttttttt
     1321 aatgtttata atgtgattat tatattgtat aattgtattt atatatttaa gttaatt
//
LOCUS       XM_071886179            1309 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904238), transcript variant X4, mRNA.
ACCESSION   XM_071886179
VERSION     XM_071886179.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1309
                     /gene="LOC139904238"
                     /note="uncharacterized LOC139904238; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904238"
     CDS             48..1166
                     /gene="LOC139904238"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071742280.1"
                     /db_xref="GeneID:139904238"
                     /translation="MAVTHFTNHILQPISGQQRLKPPLQNRIIPDDNTTQIRQNLVVK
                     HSLKSSKVEQSFKKSEVDVQRLVDFLYEDLPHVFDDHGLDWTAYEKDIKFQDPITKHD
                     NINGYLFYISLLKLLFSANLQIHWIKQTGDYEITARWTTEMRYYGLPWKPLLVVTGTS
                     VLGINPENGKFCSHMDYWDSVKNNDYLSFESLVDIMKQMCSYKTPELVTPEYQTLKRT
                     TAYEVRNYSPFIVVETQNNKLAGSTGYNNEAGYIYGEHLRKEKIPMTIPVFTQSFDPG
                     NFRISIQIVHSSKRNLNGLQDSMNRKNITSRRSFQEGFAAVLEFGGKPTEDIVREKEN
                     LLRASILSEGLKPKDGCLLACYYDPDKTNLFMMLLKKH"
     misc_feature    237..569
                     /gene="LOC139904238"
                     /note="Nuclear transport factor 2 (NTF2-like) superfamily.
                     This family includes members of the NTF2 family,
                     Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
                     and the beta subunit of Ring hydroxylating dioxygenases.
                     This family is a classic example of...; Region: NTF2_like;
                     cl09109"
                     /db_xref="CDD:471850"
     misc_feature    672..1124
                     /gene="LOC139904238"
                     /note="SOUL heme-binding protein; Region: SOUL; pfam04832"
                     /db_xref="CDD:461449"
ORIGIN      
        1 tttgtgtgtc ttgctgatat tcattactgt acaatataca cacacaaatg gctgttacac
       61 atttcacaaa ccacatactt cagccaattt ccggtcaaca aagacttaaa ccaccactgc
      121 agaatagaat tataccagat gataatacta ctcaaattag acaaaattta gtagtaaaac
      181 atagcttgaa atcatcaaaa gttgagcaaa gcttcaaaaa atcagaagtt gatgttcaac
      241 ggttggtgga ttttttgtat gaggaccttc cacatgtctt tgatgatcat ggacttgatt
      301 ggaccgcgta tgagaaagat atcaaatttc aggatccgat taccaaacat gacaatataa
      361 acggatattt gttttacatt tcattgttga agctgctctt ctctgctaat ctacagattc
      421 attggattaa acagacagga gattatgaaa ttactgcaag gtggactacg gaaatgagat
      481 actatggtct accatggaag ccattgttgg tggttacagg tacttctgta ttgggcatca
      541 atccagaaaa tggaaagttt tgcagtcaca tggattattg ggattctgta aagaacaatg
      601 actacctttc ctttgaaagt ctcgtggata taatgaaaca aatgtgtagc tacaagactc
      661 cagagttagt aacacccgaa tatcaaactc tgaaaagaac cacagcatac gaggtacgca
      721 actacagccc attcatagtc gtcgaaacac aaaacaacaa acttgctgga tcaacaggat
      781 ataacaatga agctgggtat atatatgggg agcacttgag gaaggaaaaa atacctatga
      841 caattccagt tttcactcaa tcatttgatc ctggaaattt cagaatatcc atccagatag
      901 ttcattcatc aaaaagaaac ttaaatggtt tacaagattc aatgaacaga aaaaacatta
      961 cttcgaggag gagctttcaa gaagggttcg cagctgtatt agagttcggt ggcaaaccta
     1021 cagaagatat cgttcgtgaa aaagagaatt tgctaagggc tagtattctt tctgaaggtc
     1081 ttaagcctaa agacggatgt ttactagctt gctactatga tcctgacaaa acaaatcttt
     1141 ttatgatgct actgaagaaa cactgaatta aaaaaaaatg tcaaatgtag acttgccaag
     1201 aagacacgtg gttggctcta tgttggatga attcgttcga agattctttt ttttaatgtt
     1261 tataatgtga ttattatatt gtataattgt atttatatat ttaagttaa
//
LOCUS       XR_011778709            1285 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904238), transcript variant X5, misc_RNA.
ACCESSION   XR_011778709
VERSION     XR_011778709.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1285
                     /gene="LOC139904238"
                     /note="uncharacterized LOC139904238; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904238"
     misc_RNA        1..1285
                     /gene="LOC139904238"
                     /product="uncharacterized protein, transcript variant X5"
                     /db_xref="GeneID:139904238"
ORIGIN      
        1 ttgtgtgtct tgctgatatt cattactgta caatatacac acacaaatgg ctgttacaca
       61 tttcacaaac cacatacttc agccaatttc cggtcaacaa agacttaaac caccactgca
      121 gaatagaatt ataccagatg ataatactac tcaaattaga caaaatttag tagtaaaaca
      181 tagcttgaaa tcatcaaaag ttgagcaaag cttcaaaaaa tcagaagttg atgttcaacg
      241 gttggtggat tttttgtatg aggaccttcc acatgtcttt gatgatcatg gacttgattg
      301 gaccgcgtat gagaaagata tcaaatttca ggatccgatt accaaacatg acaatataaa
      361 cggatatttg ttttacattt cattgttgaa gctgctcttc tctgctaatc tacagattca
      421 ttggattaaa cagacaggag attatgaaat tactgcaagg tggactacgg aaatgagata
      481 ctatggtcta ccatggaagc cattgttggt ggttacaggt acttctgtat tgggcatcaa
      541 tccagaaaat ggaaagtttt gcagtcacat ggattattgg gattctgtaa agaacaatga
      601 ctacctttcc tttgaaagtc tcgtggatat aatgaaacaa atgtgtagct acaagactcc
      661 agagttagta acacccgaat atcaaactct gaaaagaacc acagcatacg aggtacgcaa
      721 ctacagccca ttcatagtcg tcgaaacaca aaacaacaaa cttgctggat caacaggata
      781 taacaatgaa gctgggtata tatatgggga gcacttgagg aaggaaaaaa tacctatgac
      841 aattccagtt ttcactcaat catttgatcc tggaaatttc agaatatcca tccagatagt
      901 tcattcatca aaaagaaact taaatggttt acaagattca atgaacagaa aaaacattac
      961 ttcgaggagg agctttcaag aagggttcgc agctgtatta gagttcggtg gcaaacctac
     1021 agaagatatc gttcgtgaaa aagagaattt gctaagggct agtattcttt ctgaaggtct
     1081 taagcctaaa gacggatgtt tactagcttg ctactatgat cctgacaaaa caaatctttt
     1141 tatgatgtag caatcataca atgagaagat cacgccatat tactaaaaga tgaatattca
     1201 agttatgtat catgagctac tgaagaaaca ctgaattaaa aaaaaatgtc aaatgtagac
     1261 ttgccaagaa gacacgtggt tggct
//
LOCUS       XM_071886180            1843 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904238), transcript variant X6, mRNA.
ACCESSION   XM_071886180
VERSION     XM_071886180.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1843
                     /gene="LOC139904238"
                     /note="uncharacterized LOC139904238; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904238"
     CDS             48..1124
                     /gene="LOC139904238"
                     /codon_start=1
                     /product="uncharacterized protein isoform X5"
                     /protein_id="XP_071742281.1"
                     /db_xref="GeneID:139904238"
                     /translation="MAVTHFTNHILQPISGQQRLKPPLQNRIIPDDNTTQIRQNLVVK
                     HSLKSSKVEQSFKKSEVDVQRLVDFLYEDLPHVFDDHGLDWTAYEKDIKFQDPITKHD
                     NINGYLFYISLLKLLFSANLQIHWIKQTGDYEITARWTTEMRYYGLPWKPLLVVTGTS
                     VLGINPENGKFCSHMMCSYKTPELVTPEYQTLKRTTAYEVRNYSPFIVVETQNNKLAG
                     STGYNNEAGYIYGEHLRKEKIPMTIPVFTQSFDPGNFRISIQIVHSSKRNLNGLQDSM
                     NRKNITSRRSFQEGFAAVLEFGGKPTEDIVREKENLLRASILSEGLKPKDGCLLACYY
                     DPDKTNLFMMINEVLIWLEEFVLD"
     misc_feature    237..569
                     /gene="LOC139904238"
                     /note="Nuclear transport factor 2 (NTF2-like) superfamily.
                     This family includes members of the NTF2 family,
                     Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
                     and the beta subunit of Ring hydroxylating dioxygenases.
                     This family is a classic example of...; Region: NTF2_like;
                     cl09109"
                     /db_xref="CDD:471850"
     misc_feature    603..1100
                     /gene="LOC139904238"
                     /note="SOUL heme-binding protein; Region: SOUL; pfam04832"
                     /db_xref="CDD:461449"
ORIGIN      
        1 tttgtgtgtc ttgctgatat tcattactgt acaatataca cacacaaatg gctgttacac
       61 atttcacaaa ccacatactt cagccaattt ccggtcaaca aagacttaaa ccaccactgc
      121 agaatagaat tataccagat gataatacta ctcaaattag acaaaattta gtagtaaaac
      181 atagcttgaa atcatcaaaa gttgagcaaa gcttcaaaaa atcagaagtt gatgttcaac
      241 ggttggtgga ttttttgtat gaggaccttc cacatgtctt tgatgatcat ggacttgatt
      301 ggaccgcgta tgagaaagat atcaaatttc aggatccgat taccaaacat gacaatataa
      361 acggatattt gttttacatt tcattgttga agctgctctt ctctgctaat ctacagattc
      421 attggattaa acagacagga gattatgaaa ttactgcaag gtggactacg gaaatgagat
      481 actatggtct accatggaag ccattgttgg tggttacagg tacttctgta ttgggcatca
      541 atccagaaaa tggaaagttt tgcagtcaca tgatgtgtag ctacaagact ccagagttag
      601 taacacccga atatcaaact ctgaaaagaa ccacagcata cgaggtacgc aactacagcc
      661 cattcatagt cgtcgaaaca caaaacaaca aacttgctgg atcaacagga tataacaatg
      721 aagctgggta tatatatggg gagcacttga ggaaggaaaa aatacctatg acaattccag
      781 ttttcactca atcatttgat cctggaaatt tcagaatatc catccagata gttcattcat
      841 caaaaagaaa cttaaatggt ttacaagatt caatgaacag aaaaaacatt acttcgagga
      901 ggagctttca agaagggttc gcagctgtat tagagttcgg tggcaaacct acagaagata
      961 tcgttcgtga aaaagagaat ttgctaaggg ctagtattct ttctgaaggt cttaagccta
     1021 aagacggatg tttactagct tgctactatg atcctgacaa aacaaatctt tttatgatga
     1081 taaatgaggt tcttatttgg cttgaggaat tcgtgttgga ctagttctgt tgcgcatgat
     1141 caatcccatc tacagggatt ggaattctat aataaaataa aaaaaaaaaa aaaaaaaaaa
     1201 aagcacaaaa actgtagcag aacaccagtt gtatgtttat attttcacat attttatgaa
     1261 aatatgaaca aaactgtaac agcaatctgt atatcatact ttctgttacg atgtagtaat
     1321 taaaataatt ccgatgtcgg tggaagaagg aaaaataggg ttgttctctt tgtacgcttg
     1381 tacgaagaca acattgtatc ttgtgtctac atggacatga aatcaaatct gtttgctgat
     1441 tccaaaaact gtggacaatt ttgtctcagt tttcaaatac aagtttctat gtaatgaatc
     1501 caccatcaga tatggttcct ttagtcagag taaacggcta ctgtggctcc aaccgaatga
     1561 aacattatgt ttgttttagc ggttacaagc agtaacattt aaaaaaagac actttgtgaa
     1621 tgttatcagg aatatgaatg ttatttcatc tagcgttttc tggtcaaaat aatacggagt
     1681 aacatttatc acaaagtgtc ttttttaaat tgtttagatt tttacgtgat cttaatgttt
     1741 gtaaaaaaaa aaaaaaaaaa tttaaagaaa agcaaaaaaa aatttacttc ccgcttccca
     1801 aataaatcta ttactaccta aatattgaca ccctgtgtca taa
//
LOCUS       XM_071886181            1316 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GDP-fucose transporter
            1-like (LOC139904239), mRNA.
ACCESSION   XM_071886181
VERSION     XM_071886181.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1316
                     /gene="LOC139904239"
                     /note="GDP-fucose transporter 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904239"
     CDS             155..1171
                     /gene="LOC139904239"
                     /codon_start=1
                     /product="GDP-fucose transporter 1-like"
                     /protein_id="XP_071742282.1"
                     /db_xref="GeneID:139904239"
                     /translation="MIVPKQHYATSSLVIGYALCSSLLAVINKFAITKFNYPGLLTAL
                     QYLVSALGVWLLGKLGFLNHDPFTWGTAKKFLPAAIVFYLAIFTNTNLLRHANVDTFI
                     VFRSLTPILVAIADTMFRKQPIPSKLTFVSLLVIMGGAVGYVATDSGFNLTAYSWAFA
                     YLITITTEMVYIKHMVTNLGLNTWGFVYYNNLLSLMMAPLFWVITGEYSDVFAVVGSN
                     RGNLFEIVAFTAVSLSCVFGLAISFFGFACRKAISATAFTVTGVVNKFLTVAINVLIW
                     DKHASPFGLLCLLITIGGGILYQQSVTGVTVPSAQRDPAASTLVDDKVDVDDYSEEDQ
                     EKGT"
     misc_feature    194..1099
                     /gene="LOC139904239"
                     /note="Nucleotide-sugar transporter [Carbohydrate
                     transport and metabolism / Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; Region: VRG4; COG5070"
                     /db_xref="CDD:227402"
ORIGIN      
        1 aatgtcgaaa gtccttaaaa atcaccccca actcccattc acacatttaa attcaacctc
       61 tcactgaatc tactccagat ccaatcgtca aattcgcatc tcactaaacc ctaatttcac
      121 cccgaatttc aatctccccc aaagttcatc tacaatgatt gtaccaaaac aacattatgc
      181 cacaagcagt ttagtaatcg gctacgcttt atgttcaagt ttactagcag taatcaacaa
      241 attcgcaatc actaaattca attatccagg tttattaact gctttacagt acttagtttc
      301 agctttaggt gtttggttat taggtaaatt agggtttcta aatcacgatc catttacttg
      361 gggaactgca aagaagtttt taccagctgc aattgttttt tatctcgcaa tatttacaaa
      421 caccaatctg ttacgtcatg caaatgttga tacatttatt gtgtttagat cactgactcc
      481 aattctagtt gccattgctg atactatgtt tcgaaaacaa ccgattccat caaagcttac
      541 gtttgtttcg cttttagtta taatgggtgg tgcagttggg tacgttgcga ccgattcggg
      601 gtttaatcta actgcgtatt cgtgggcgtt tgcatatttg atcacgatca caaccgaaat
      661 ggtttatatt aaacatatgg ttacgaatct cgggttgaat acttggggat ttgtttatta
      721 taataatttg ttgtcgctaa tgatggcacc gttgttttgg gttataacgg gtgagtattc
      781 ggatgtgttt gctgtcgttg ggtcaaaccg cggtaatttg tttgaaattg ttgcgtttac
      841 tgcagtctca ttgtcgtgtg tttttggact agcgattagt ttttttggat ttgcttgtcg
      901 caaagctata tctgcaacag catttactgt gactggtgtt gtgaataagt ttcttacggt
      961 tgctattaat gttttgattt gggataaaca tgctagcccg tttgggctgt tatgtttgct
     1021 cataacgatt ggtggaggga tattgtatca gcaatctgtt actggagtta ctgttccctc
     1081 tgcacagcgg gatcctgcag catctacgtt ggtggatgat aaagttgatg ttgatgatta
     1141 ctcggaagaa gatcaagaaa agggcacata gggccaaacc ggtgtataag cattttttgg
     1201 catcctttaa agaggttcgg acaactaaaa cttagtttta tttactttaa agtgtattat
     1261 ctgtttttca attttcatta tcgaaatatt atatcatata ggttgttctt tacaca
//
LOCUS       XM_071886182            1674 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SLENDER RICE1-LIKE
            1-like (LOC139904240), mRNA.
ACCESSION   XM_071886182
VERSION     XM_071886182.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1674
                     /gene="LOC139904240"
                     /note="protein SLENDER RICE1-LIKE 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 Proteins"
                     /db_xref="GeneID:139904240"
     CDS             54..1670
                     /gene="LOC139904240"
                     /codon_start=1
                     /product="protein SLENDER RICE1-LIKE 1-like"
                     /protein_id="XP_071742283.1"
                     /db_xref="GeneID:139904240"
                     /translation="MSPYDSSVSGAGTVAGASSSSSSSSSACSSSTKPPDQMDHLLAG
                     AGYKVRSNDLRQVAERLEHLETAMVKSSTVEFSELVNDAVLYNPTDLASWVDSLLTEL
                     NTNQTVSVPVPHHSDPQYNFNFNNNNNIDNNNYIHVSQQQVVTPLEEDASIRLVHVLM
                     TCAEAVQRGDLSLASLLIDDLQALLGRVNSACGIGKVGSFFVDALSRRVVNAPQNGAV
                     SVDLSAYENEILYHHYYEACPYLKFAHFTANQAILEAFDGQDCVHVIDFNLMQGLQWP
                     ALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLKLAELARSVNVRFAFRGVAAS
                     RLDDVKPWMLQVSPKEAVAVNSIMQLHKLLGPDDPRGPPIDLVLDWIRDLNPRIVMVV
                     EQESYHNQPEFLDRFTEALYYYSTMFDSLDACTALPEKTLAELYIQREICNVVCCEGL
                     ARVERHEPLVRWRDRLTSAGFAPLHLGSNAFKQARMLLTLFSAEGYCVEENEGCLTLG
                     WHSRPLIAASAWQAIPKPSLATGIVSPSPS"
     misc_feature    168..371
                     /gene="LOC139904240"
                     /note="Transcriptional regulator DELLA protein N terminal;
                     Region: DELLA; pfam12041"
                     /db_xref="CDD:403308"
     misc_feature    516..1613
                     /gene="LOC139904240"
                     /note="GRAS domain family; Region: GRAS; pfam03514"
                     /db_xref="CDD:397536"
ORIGIN      
        1 ttactcacca tttcttctga atttcatcaa tttcaaactc tactttaaat tcaatgagcc
       61 cctacgattc ttcagtctcc ggtgccggca ccgttgccgg agccagctct tcatcctcat
      121 cctcatcctc tgcttgttct tcctccacta aaccacccga tcaaatggac cacctactcg
      181 ccggcgccgg ctacaaagtc cggtcgaacg acctccgtca agtcgctgaa cgtctcgaac
      241 acctcgaaac tgccatggtc aaatcgtcaa cggttgagtt ctcggaactt gtaaacgacg
      301 ccgttcttta taatcctacc gaccttgctt cctgggttga ctcgttactc actgagttaa
      361 atacaaatca aacagtatcc gtacctgtac cccatcattc ggatccacaa tataatttca
      421 atttcaataa taataataat attgataata ataattacat tcacgtgtct caacaacaag
      481 ttgttactcc gttagaagaa gacgctagta ttcggttagt acacgtgtta atgacgtgcg
      541 ctgaagccgt ccaacgtggc gatctctcac tggctagttt gttaattgat gatctacaag
      601 ctttgctcgg acgagtaaat agcgcgtgtg gtatcggtaa agtcgggagt tttttcgttg
      661 acgcacttag tcggcgtgta gtaaacgcgc cgcagaacgg tgccgtttcg gtggatttgt
      721 cagcttacga gaatgagata ctataccatc attattatga agcctgtcct tatttaaagt
      781 ttgctcattt cactgctaat caagctattt tagaagcctt tgacggtcaa gattgtgtcc
      841 acgtcatcga ttttaatcta atgcaggggt tacaatggcc ggcattgata caagccttag
      901 cgttgaggcc cggtgggccg cccttgttgc gcctcaccgg gattggtcca ccgtctcctg
      961 atggacgtga ttcattacgt gagattgggc tcaagttagc cgaattggcc cgatcagtga
     1021 acgtgcgatt cgcgttccgt ggtgttgcgg cctcacgtct ggatgacgtg aagccgtgga
     1081 tgttgcaagt tagcccgaaa gaggctgttg cggtgaattc tataatgcaa ttacacaagt
     1141 tgttaggacc ggatgaccca cgtgggccac ctattgattt ggtccttgat tggattcgtg
     1201 atttgaatcc aagaattgta atggttgtgg aacaggaatc gtaccacaac caaccagaat
     1261 tcttggatag atttacagag gccttatact attactcaac aatgtttgac tctttagatg
     1321 catgcacagc tttacccgag aagaccctag ctgaattata catacaacgt gagatttgta
     1381 atgtcgtgtg ctgcgaaggg ttagctagag ttgagagaca tgagccattg gttagatgga
     1441 gggatcgttt gactagtgcc ggttttgcac cgttacattt agggtctaat gcgtttaagc
     1501 aagcccgtat gttattaacc ttgttttctg ctgaagggta ttgtgttgaa gaaaacgaag
     1561 ggtgtttgac cctcggatgg catagtcgtc cccttattgc tgcctcggct tggcaggcta
     1621 ttccaaagcc aagcctggca acggggattg tatccccatc cccatcttaa tatc
//
LOCUS       XM_071886183             807 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine--tRNA ligase,
            cytoplasmic-like (LOC139904241), transcript variant X1, mRNA.
ACCESSION   XM_071886183
VERSION     XM_071886183.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..807
                     /gene="LOC139904241"
                     /note="lysine--tRNA ligase, cytoplasmic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904241"
     CDS             295..678
                     /gene="LOC139904241"
                     /codon_start=1
                     /product="lysine--tRNA ligase, cytoplasmic-like isoform
                     X1"
                     /protein_id="XP_071742284.1"
                     /db_xref="GeneID:139904241"
                     /translation="MSFIRKGLSCMDEATFFERHFDLRNGDYIGAIWCTGTSSKGGLG
                     VIPKIIVNLSCCLYKMPPPVHCNVNTGVWTPGSGRYPDAYILNDQVGIHYPNLYFFKA
                     MFIAVLLAFMKKLIFNKKLCLVKGA"
     misc_feature    <331..>477
                     /gene="LOC139904241"
                     /note="Class II tRNA amino-acyl synthetase-like catalytic
                     core domain. Class II amino acyl-tRNA synthetases (aaRS)
                     share a common fold and generally attach an amino acid to
                     the 3' OH of ribose of the appropriate tRNA. PheRS is an
                     exception in that it attaches...; Region:
                     class_II_aaRS-like_core; cl00268"
                     /db_xref="CDD:444800"
ORIGIN      
        1 aaaatctttg aggatggagg gactaaaacc tagatcttat catcttcctc ctcatgaact
       61 atccatacac ttttagagag agagcaagga gaaggcttga tttggtgtaa ttaggtccca
      121 atactatgga tcctcattag ggttctattc atcatctagg aagtgaaagc aaggctcaat
      181 tccatcatct ttgttctcat cttcatcatg ttggtaactt aattttgtga attacaagaa
      241 ctcgttatga ggagttgatt gaccagttaa ttaaggaaca gatctgtcgt ctaaatgagt
      301 tttatacgga aagggttatc ttgtatggac gaagctactt tttttgagcg tcactttgat
      361 ttgagaaatg gggattacat tggcgctatt tggtgtacag gaacaagcag taagggaggg
      421 ctgggtgtta ttccaaaaat aatcgtgaat ttgtcttgtt gtctttataa gatgccacca
      481 cctgtgcatt gcaatgtaaa tactggtgtt tggactcctg gaagtggtag atatcctgat
      541 gcttatattt taaatgatca ggtaggtatt cattacccga acctctactt ttttaaggct
      601 atgtttatcg cggtgctttt agcttttatg aaaaagctca tatttaataa aaagctttgt
      661 ttggttaaag gagcttaaaa tatttaaaca tacgaaaaaa agttaaaagc tactagcttg
      721 ttgtcatttt actttttatt tagcatattc agctactctg ccatgcacct aaatacattt
      781 aaaaatttac cagctactaa ctaaaag
//
LOCUS       XM_071886184             801 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine--tRNA ligase,
            cytoplasmic-like (LOC139904241), transcript variant X2, mRNA.
ACCESSION   XM_071886184
VERSION     XM_071886184.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..801
                     /gene="LOC139904241"
                     /note="lysine--tRNA ligase, cytoplasmic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904241"
     CDS             295..672
                     /gene="LOC139904241"
                     /codon_start=1
                     /product="lysine--tRNA ligase, cytoplasmic-like isoform
                     X2"
                     /protein_id="XP_071742285.1"
                     /db_xref="GeneID:139904241"
                     /translation="MSFIRKGLSCMDEATFFERHFDLRNGDYIGAIWCTGTSSKGGLG
                     VIPKIIVNLSCCLYKMPPPVHCNTGVWTPGSGRYPDAYILNDQVGIHYPNLYFFKAMF
                     IAVLLAFMKKLIFNKKLCLVKGA"
     misc_feature    <331..>477
                     /gene="LOC139904241"
                     /note="Class II tRNA amino-acyl synthetase-like catalytic
                     core domain. Class II amino acyl-tRNA synthetases (aaRS)
                     share a common fold and generally attach an amino acid to
                     the 3' OH of ribose of the appropriate tRNA. PheRS is an
                     exception in that it attaches...; Region:
                     class_II_aaRS-like_core; cl00268"
                     /db_xref="CDD:444800"
ORIGIN      
        1 aaaatctttg aggatggagg gactaaaacc tagatcttat catcttcctc ctcatgaact
       61 atccatacac ttttagagag agagcaagga gaaggcttga tttggtgtaa ttaggtccca
      121 atactatgga tcctcattag ggttctattc atcatctagg aagtgaaagc aaggctcaat
      181 tccatcatct ttgttctcat cttcatcatg ttggtaactt aattttgtga attacaagaa
      241 ctcgttatga ggagttgatt gaccagttaa ttaaggaaca gatctgtcgt ctaaatgagt
      301 tttatacgga aagggttatc ttgtatggac gaagctactt tttttgagcg tcactttgat
      361 ttgagaaatg gggattacat tggcgctatt tggtgtacag gaacaagcag taagggaggg
      421 ctgggtgtta ttccaaaaat aatcgtgaat ttgtcttgtt gtctttataa gatgccacca
      481 cctgtgcatt gcaatactgg tgtttggact cctggaagtg gtagatatcc tgatgcttat
      541 attttaaatg atcaggtagg tattcattac ccgaacctct acttttttaa ggctatgttt
      601 atcgcggtgc ttttagcttt tatgaaaaag ctcatattta ataaaaagct ttgtttggtt
      661 aaaggagctt aaaatattta aacatacgaa aaaaagttaa aagctactag cttgttgtca
      721 ttttactttt tatttagcat attcagctac tctgccatgc acctaaatac atttaaaaat
      781 ttaccagcta ctaactaaaa g
//
LOCUS       XM_071886185             711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine--tRNA ligase,
            cytoplasmic-like (LOC139904241), transcript variant X3, mRNA.
ACCESSION   XM_071886185
VERSION     XM_071886185.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..711
                     /gene="LOC139904241"
                     /note="lysine--tRNA ligase, cytoplasmic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904241"
     CDS             295..582
                     /gene="LOC139904241"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742286.1"
                     /db_xref="GeneID:139904241"
                     /translation="MSFIRKGLSCMDEATFFERHFDLRNGDYIGAIWCTEKTGVWTPG
                     SGRYPDAYILNDQVGIHYPNLYFFKAMFIAVLLAFMKKLIFNKKLCLVKGA"
ORIGIN      
        1 aaaatctttg aggatggagg gactaaaacc tagatcttat catcttcctc ctcatgaact
       61 atccatacac ttttagagag agagcaagga gaaggcttga tttggtgtaa ttaggtccca
      121 atactatgga tcctcattag ggttctattc atcatctagg aagtgaaagc aaggctcaat
      181 tccatcatct ttgttctcat cttcatcatg ttggtaactt aattttgtga attacaagaa
      241 ctcgttatga ggagttgatt gaccagttaa ttaaggaaca gatctgtcgt ctaaatgagt
      301 tttatacgga aagggttatc ttgtatggac gaagctactt tttttgagcg tcactttgat
      361 ttgagaaatg gggattacat tggcgctatt tggtgtacag agaagactgg tgtttggact
      421 cctggaagtg gtagatatcc tgatgcttat attttaaatg atcaggtagg tattcattac
      481 ccgaacctct acttttttaa ggctatgttt atcgcggtgc ttttagcttt tatgaaaaag
      541 ctcatattta ataaaaagct ttgtttggtt aaaggagctt aaaatattta aacatacgaa
      601 aaaaagttaa aagctactag cttgttgtca ttttactttt tatttagcat attcagctac
      661 tctgccatgc acctaaatac atttaaaaat ttaccagcta ctaactaaaa g
//
LOCUS       XM_071886186             829 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine--tRNA ligase,
            cytoplasmic-like (LOC139904241), transcript variant X4, mRNA.
ACCESSION   XM_071886186
VERSION     XM_071886186.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..829
                     /gene="LOC139904241"
                     /note="lysine--tRNA ligase, cytoplasmic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904241"
     CDS             294..575
                     /gene="LOC139904241"
                     /codon_start=1
                     /product="lysine--tRNA ligase, cytoplasmic-like isoform
                     X4"
                     /protein_id="XP_071742287.1"
                     /db_xref="GeneID:139904241"
                     /translation="MSFIRKGLSCMDEATFFERHFDLRNGDYIGAIWCTGTSSKGGLG
                     VIPKIIVNLSCCLYKMPPPVHCNVNTGVWTPGSGRYPDAYILNDQVLEA"
     misc_feature    <330..>476
                     /gene="LOC139904241"
                     /note="Class II tRNA amino-acyl synthetase-like catalytic
                     core domain. Class II amino acyl-tRNA synthetases (aaRS)
                     share a common fold and generally attach an amino acid to
                     the 3' OH of ribose of the appropriate tRNA. PheRS is an
                     exception in that it attaches...; Region:
                     class_II_aaRS-like_core; cl00268"
                     /db_xref="CDD:444800"
ORIGIN      
        1 aaatctttga ggatggaggg actaaaacct agatcttatc atcttcctcc tcatgaacta
       61 tccatacact tttagagaga gagcaaggag aaggcttgat ttggtgtaat taggtcccaa
      121 tactatggat cctcattagg gttctattca tcatctagga agtgaaagca aggctcaatt
      181 ccatcatctt tgttctcatc ttcatcatgt tggtaactta attttgtgaa ttacaagaac
      241 tcgttatgag gagttgattg accagttaat taaggaacag atctgtcgtc taaatgagtt
      301 ttatacggaa agggttatct tgtatggacg aagctacttt ttttgagcgt cactttgatt
      361 tgagaaatgg ggattacatt ggcgctattt ggtgtacagg aacaagcagt aagggagggc
      421 tgggtgttat tccaaaaata atcgtgaatt tgtcttgttg tctttataag atgccaccac
      481 ctgtgcattg caatgtaaat actggtgttt ggactcctgg aagtggtaga tatcctgatg
      541 cttatatttt aaatgatcag gttttggagg catgacttta atattcagag tttaagagct
      601 tggtttttgg tagataggaa acttatgtta gcacaaagct gagaaaaatc acttccaaaa
      661 ttcattattg ttgtgtagat tgactatggg atatttggat attaaatctt aaacatttat
      721 cgcttcctgg tgcatatcta aaaggaagca ctttgattag caaactattg tgttatcata
      781 ttattacttc gttaatcaat atattgtggt tgacatagta attttatct
//
LOCUS       XM_071886187             823 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine--tRNA ligase,
            cytoplasmic-like (LOC139904241), transcript variant X5, mRNA.
ACCESSION   XM_071886187
VERSION     XM_071886187.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..823
                     /gene="LOC139904241"
                     /note="lysine--tRNA ligase, cytoplasmic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904241"
     CDS             294..569
                     /gene="LOC139904241"
                     /codon_start=1
                     /product="lysine--tRNA ligase, cytoplasmic-like isoform
                     X5"
                     /protein_id="XP_071742288.1"
                     /db_xref="GeneID:139904241"
                     /translation="MSFIRKGLSCMDEATFFERHFDLRNGDYIGAIWCTGTSSKGGLG
                     VIPKIIVNLSCCLYKMPPPVHCNTGVWTPGSGRYPDAYILNDQVLEA"
     misc_feature    <330..>476
                     /gene="LOC139904241"
                     /note="Class II tRNA amino-acyl synthetase-like catalytic
                     core domain. Class II amino acyl-tRNA synthetases (aaRS)
                     share a common fold and generally attach an amino acid to
                     the 3' OH of ribose of the appropriate tRNA. PheRS is an
                     exception in that it attaches...; Region:
                     class_II_aaRS-like_core; cl00268"
                     /db_xref="CDD:444800"
ORIGIN      
        1 aaatctttga ggatggaggg actaaaacct agatcttatc atcttcctcc tcatgaacta
       61 tccatacact tttagagaga gagcaaggag aaggcttgat ttggtgtaat taggtcccaa
      121 tactatggat cctcattagg gttctattca tcatctagga agtgaaagca aggctcaatt
      181 ccatcatctt tgttctcatc ttcatcatgt tggtaactta attttgtgaa ttacaagaac
      241 tcgttatgag gagttgattg accagttaat taaggaacag atctgtcgtc taaatgagtt
      301 ttatacggaa agggttatct tgtatggacg aagctacttt ttttgagcgt cactttgatt
      361 tgagaaatgg ggattacatt ggcgctattt ggtgtacagg aacaagcagt aagggagggc
      421 tgggtgttat tccaaaaata atcgtgaatt tgtcttgttg tctttataag atgccaccac
      481 ctgtgcattg caatactggt gtttggactc ctggaagtgg tagatatcct gatgcttata
      541 ttttaaatga tcaggttttg gaggcatgac tttaatattc agagtttaag agcttggttt
      601 ttggtagata ggaaacttat gttagcacaa agctgagaaa aatcacttcc aaaattcatt
      661 attgttgtgt agattgacta tgggatattt ggatattaaa tcttaaacat ttatcgcttc
      721 ctggtgcata tctaaaagga agcactttga ttagcaaact attgtgttat catattatta
      781 cttcgttaat caatatattg tggttgacat agtaatttta tct
//
LOCUS       XM_071886188             834 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine--tRNA ligase,
            cytoplasmic-like (LOC139904241), transcript variant X6, mRNA.
ACCESSION   XM_071886188
VERSION     XM_071886188.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..834
                     /gene="LOC139904241"
                     /note="lysine--tRNA ligase, cytoplasmic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904241"
     CDS             294..557
                     /gene="LOC139904241"
                     /codon_start=1
                     /product="uncharacterized protein isoform X6"
                     /protein_id="XP_071742289.1"
                     /db_xref="GeneID:139904241"
                     /translation="MSFIRKGLSCMDEATFFERHFDLRNGDYIGAIWCTGTSSKGGLG
                     VIPKIIVNLSCCLYKMPPPVHCNVNRRLVFGLLEVVDILMLIF"
     misc_feature    <330..>476
                     /gene="LOC139904241"
                     /note="Class II tRNA amino-acyl synthetase-like catalytic
                     core domain. Class II amino acyl-tRNA synthetases (aaRS)
                     share a common fold and generally attach an amino acid to
                     the 3' OH of ribose of the appropriate tRNA. PheRS is an
                     exception in that it attaches...; Region:
                     class_II_aaRS-like_core; cl00268"
                     /db_xref="CDD:444800"
ORIGIN      
        1 aaatctttga ggatggaggg actaaaacct agatcttatc atcttcctcc tcatgaacta
       61 tccatacact tttagagaga gagcaaggag aaggcttgat ttggtgtaat taggtcccaa
      121 tactatggat cctcattagg gttctattca tcatctagga agtgaaagca aggctcaatt
      181 ccatcatctt tgttctcatc ttcatcatgt tggtaactta attttgtgaa ttacaagaac
      241 tcgttatgag gagttgattg accagttaat taaggaacag atctgtcgtc taaatgagtt
      301 ttatacggaa agggttatct tgtatggacg aagctacttt ttttgagcgt cactttgatt
      361 tgagaaatgg ggattacatt ggcgctattt ggtgtacagg aacaagcagt aagggagggc
      421 tgggtgttat tccaaaaata atcgtgaatt tgtcttgttg tctttataag atgccaccac
      481 ctgtgcattg caatgtaaat agaagactgg tgtttggact cctggaagtg gtagatatcc
      541 tgatgcttat attttaaatg atcaggtttt ggaggcatga ctttaatatt cagagtttaa
      601 gagcttggtt tttggtagat aggaaactta tgttagcaca aagctgagaa aaatcacttc
      661 caaaattcat tattgttgtg tagattgact atgggatatt tggatattaa atcttaaaca
      721 tttatcgctt cctggtgcat atctaaaagg aagcactttg attagcaaac tattgtgtta
      781 tcatattatt acttcgttaa tcaatatatt gtggttgaca tagtaatttt atct
//
LOCUS       XM_071886189             828 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine--tRNA ligase,
            cytoplasmic-like (LOC139904241), transcript variant X7, mRNA.
ACCESSION   XM_071886189
VERSION     XM_071886189.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..828
                     /gene="LOC139904241"
                     /note="lysine--tRNA ligase, cytoplasmic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904241"
     CDS             294..551
                     /gene="LOC139904241"
                     /codon_start=1
                     /product="uncharacterized protein isoform X7"
                     /protein_id="XP_071742290.1"
                     /db_xref="GeneID:139904241"
                     /translation="MSFIRKGLSCMDEATFFERHFDLRNGDYIGAIWCTGTSSKGGLG
                     VIPKIIVNLSCCLYKMPPPVHCNRRLVFGLLEVVDILMLIF"
     misc_feature    <330..>476
                     /gene="LOC139904241"
                     /note="Class II tRNA amino-acyl synthetase-like catalytic
                     core domain. Class II amino acyl-tRNA synthetases (aaRS)
                     share a common fold and generally attach an amino acid to
                     the 3' OH of ribose of the appropriate tRNA. PheRS is an
                     exception in that it attaches...; Region:
                     class_II_aaRS-like_core; cl00268"
                     /db_xref="CDD:444800"
ORIGIN      
        1 aaatctttga ggatggaggg actaaaacct agatcttatc atcttcctcc tcatgaacta
       61 tccatacact tttagagaga gagcaaggag aaggcttgat ttggtgtaat taggtcccaa
      121 tactatggat cctcattagg gttctattca tcatctagga agtgaaagca aggctcaatt
      181 ccatcatctt tgttctcatc ttcatcatgt tggtaactta attttgtgaa ttacaagaac
      241 tcgttatgag gagttgattg accagttaat taaggaacag atctgtcgtc taaatgagtt
      301 ttatacggaa agggttatct tgtatggacg aagctacttt ttttgagcgt cactttgatt
      361 tgagaaatgg ggattacatt ggcgctattt ggtgtacagg aacaagcagt aagggagggc
      421 tgggtgttat tccaaaaata atcgtgaatt tgtcttgttg tctttataag atgccaccac
      481 ctgtgcattg caatagaaga ctggtgtttg gactcctgga agtggtagat atcctgatgc
      541 ttatatttta aatgatcagg ttttggaggc atgactttaa tattcagagt ttaagagctt
      601 ggtttttggt agataggaaa cttatgttag cacaaagctg agaaaaatca cttccaaaat
      661 tcattattgt tgtgtagatt gactatggga tatttggata ttaaatctta aacatttatc
      721 gcttcctggt gcatatctaa aaggaagcac tttgattagc aaactattgt gttatcatat
      781 tattacttcg ttaatcaata tattgtggtt gacatagtaa ttttatct
//
LOCUS       XR_011778710             734 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine--tRNA ligase,
            cytoplasmic-like (LOC139904241), transcript variant X8, misc_RNA.
ACCESSION   XR_011778710
VERSION     XR_011778710.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..734
                     /gene="LOC139904241"
                     /note="lysine--tRNA ligase, cytoplasmic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904241"
     misc_RNA        1..734
                     /gene="LOC139904241"
                     /product="lysine--tRNA ligase, cytoplasmic-like,
                     transcript variant X8"
                     /db_xref="GeneID:139904241"
ORIGIN      
        1 aaatctttga ggatggaggg actaaaacct agatcttatc atcttcctcc tcatgaacta
       61 tccatacact tttagagaga gagcaaggag aaggcttgat ttggtgtaat taggtcccaa
      121 tactatggat cctcattagg gttctattca tcatctagga agtgaaagca aggctcaatt
      181 ccatcatctt tgttctcatc ttcatcatgt tggtaactta attttgtgaa ttacaagaac
      241 tcgttatgag gagttgattg accagttaat taaggaacag atctgtcgtc taaatgagtt
      301 ttatacggaa agggttatct tgtatggacg aagctacttt ttttgagcgt cactttgatt
      361 tgagaaatgg ggattacatt ggcgctattt ggtgtacaga gaagactggt gtttggactc
      421 ctggaagtgg tagatatcct gatgcttata ttttaaatga tcaggttttg gaggcatgac
      481 tttaatattc agagtttaag agcttggttt ttggtagata ggaaacttat gttagcacaa
      541 agctgagaaa aatcacttcc aaaattcatt attgttgtgt agattgacta tgggatattt
      601 ggatattaaa tcttaaacat ttatcgcttc ctggtgcata tctaaaagga agcactttga
      661 ttagcaaact attgtgttat catattatta cttcgttaat caatatattg tggttgacat
      721 agtaatttta tctt
//
LOCUS       XM_071886190            1036 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides proteasome subunit alpha
            type-2-A-like (LOC139904242), mRNA.
ACCESSION   XM_071886190
VERSION     XM_071886190.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1036
                     /gene="LOC139904242"
                     /note="proteasome subunit alpha type-2-A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139904242"
     CDS             216..923
                     /gene="LOC139904242"
                     /codon_start=1
                     /product="proteasome subunit alpha type-2-A-like"
                     /protein_id="XP_071742291.1"
                     /db_xref="GeneID:139904242"
                     /translation="MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGV
                     VIATEKKLPSILVDETSVQKIQILTPNIGVVYSGMGPDSRVLVRKSRKQAEQYQLLYK
                     EAIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKA
                     SAMGKNVSNAKTFLEKRYTEDMELEDAIHTAILTLKEGFEGQISGKNIEIGVIEADRT
                     FRVLTEAQIEDYLQEVE"
     misc_feature    231..908
                     /gene="LOC139904242"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...; Region:
                     proteasome_alpha_type_2; cd03750"
                     /db_xref="CDD:239719"
     misc_feature    order(237..248,252..257,261..266,276..278,285..287,
                     294..299,306..308,330..332,375..377,381..386,453..461,
                     465..470,561..563,570..572,579..584,591..605,654..656,
                     669..674,678..680,684..689,693..695)
                     /gene="LOC139904242"
                     /note="alpha subunit interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:239719"
     misc_feature    order(312..314,360..362,366..368,405..407,708..710)
                     /gene="LOC139904242"
                     /note="active site"
                     /db_xref="CDD:239719"
     polyA_site      1036
                     /gene="LOC139904242"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaagtgaaa ctgtaaaaat tgagacccta ttttgtgttt tctttccctt caagccaaca
       61 aagaaaccct cgtcttcata aacactacca aatcgtcact cgtcagacat taacactcca
      121 ttgaacgaac ctcgctatac attttttcct tcgcctatcg cctatcgatt gttgctacag
      181 gttatttggc ttcatatctt aatttataga atagaatggg tgacagtcag tactcgttct
      241 ctcttactac tttcagccca tctggaaagc ttgttcagat tgaacatgca ctcacagctg
      301 ttggctcagg tcaaacttca ttgggaataa aagcttctaa tggggtagtc attgcaacag
      361 aaaagaagct cccatcgatt ttggttgacg agacatctgt gcaaaaaatt caaattttga
      421 ctcctaatat cggagtggta tacagtggaa tggggcctga ttctcgagtt ttggtcagaa
      481 agagtaggaa gcaggctgag cagtaccaac tactttataa agaagctatt cctgttacac
      541 agcttgttag agaaactgct gctgttatgc aagagtttac tcagtctggt ggtgtaagac
      601 cttttggtgt ttcgcttctc gttgctggtt atgatgacaa gggtccccag ctatatcagg
      661 ttgacccgtc tggttcatat ttttcatgga aagcttctgc tatgggaaag aatgtttcca
      721 atgcaaagac atttcttgaa aaaaggtaca ctgaggacat ggagcttgag gatgcgatac
      781 acacagctat tctaactttg aaggaaggat ttgaaggaca aatatctggt aaaaacatcg
      841 agattggtgt tatcgaggct gacagaactt tcagagtgct aactgaggct caaattgagg
      901 actatcttca agaggtggag tagtttattt gttcttgcta actatctttt tatgaaccat
      961 tctgttgaaa attatatgtt cggatatttt tcacctttgg gtgttttgtt atgaatttaa
     1021 aaaacctttg ttgtcc
//
LOCUS       XM_071886191            2328 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive receptor
            kinase At2g26730 (LOC139904243), mRNA.
ACCESSION   XM_071886191
VERSION     XM_071886191.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2328
                     /gene="LOC139904243"
                     /note="probable inactive receptor kinase At2g26730;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 36 Proteins"
                     /db_xref="GeneID:139904243"
     CDS             115..2097
                     /gene="LOC139904243"
                     /codon_start=1
                     /product="probable inactive receptor kinase At2g26730"
                     /protein_id="XP_071742292.1"
                     /db_xref="GeneID:139904243"
                     /translation="MSVFHLLLISVSLTIIFNYRVTSESTQEKQALLSFLSQVHHASR
                     ISWNSNQSTCSWTGVTCDSTNTSVISLRLPGTGLIGTIPPNTIGKLSQLRVLSLHSNA
                     LTGEFPSDFNNLAFLRNVYLQNNKFTGEFPPTFTELTRLTRLDLSANNLTGSIPFSIN
                     NLTVLTGLFLQNNSFSGQLPSINPASLVDINVSNNKLNGSIPKSLARFPVTAFSGNIN
                     LCGSPLPPCNNTFFPGPAPSPPSIEPPAVGKKHKKKLSTGAIVAIVIGSVLFLALLLL
                     ILLLCLRKKRNPKTRQVTKPSQAVSASVAASRAATEAGTSSSKDDITGASMEGERNKL
                     VFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFD
                     LQMEVLGKMKDENVVPLRAYYYSKDEKLLVYDYFPAGSLSALLHGSRGSGRSPLDWDH
                     RMRIALGTARGVAYLHVAGKVVHGNIKSSNVLLRQETNKDASVSDYGLNTLFGGSSTP
                     NNRVTGYRAPELLETRKATFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQS
                     VVREEWTAEVFDVELMRYQNIEEEMVQLLQIAMACVSTVPDQRPAMQEVVRMMEDMNR
                     AETDDGLRQSSDDPSKESGGHTPPTEARNSPNTVTP"
     misc_feature    193..300
                     /gene="LOC139904243"
                     /note="Leucine rich repeat N-terminal domain; Region:
                     LRRNT_2; pfam08263"
                     /db_xref="CDD:462411"
     misc_feature    <385..2019
                     /gene="LOC139904243"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    391..462
                     /gene="LOC139904243"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    463..534
                     /gene="LOC139904243"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    535..606
                     /gene="LOC139904243"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    607..672
                     /gene="LOC139904243"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    673..768
                     /gene="LOC139904243"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1183..1980
                     /gene="LOC139904243"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1183..1197,1207..1209,1243..1245,1249..1251,
                     1333..1335,1381..1392,1402..1404,1408..1410,1537..1539,
                     1543..1545,1549..1554,1558..1560,1597..1599,1606..1608,
                     1645..1656)
                     /gene="LOC139904243"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1183..1197,1207..1209,1243..1245,1249..1251,
                     1333..1335,1381..1392,1402..1404,1537..1539,1543..1545,
                     1549..1554,1558..1560,1597..1599)
                     /gene="LOC139904243"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1195..1197,1402..1404,1408..1410,1537..1539,
                     1543..1545,1549..1551,1606..1608,1645..1656)
                     /gene="LOC139904243"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1594..1617,1633..1656)
                     /gene="LOC139904243"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 atacacactt tgtctctaaa cccaaacatt ctctctctgt ctctaaaaat gcccaaccac
       61 caccgtaaac caccaaatta gccgccgtaa atcaccgcac gtcattcttt cacaatgtcc
      121 gtctttcatc ttctcctcat ttcagtatcc cttacaatta tcttcaatta ccgagttacc
      181 tccgagtcaa ctcaagaaaa acaagctcta ctctcattcc tctcccaagt ccatcacgct
      241 tctagaatct cctggaactc aaatcaatca acgtgctcat ggaccggtgt cacgtgcgat
      301 tccaccaaca cttccgtcat ctccctccgt cttcccggta ccggacttat cggaaccatt
      361 ccgcctaaca ccatcggaaa actatctcag ctccgcgtgt tgtcgcttca ctccaacgct
      421 ctcaccggtg agtttccttc cgatttcaat aaccttgctt tccttcgaaa cgtgtattta
      481 caaaacaaca aattcaccgg tgagttcccg cctactttta ctgagctgac tcgtttgact
      541 cggttagatc tctccgctaa taatctcacc ggttcgattc cgttttcaat caataactta
      601 accgtactca ccggactgtt tcttcaaaac aatagcttct ccggccagct tccgagtatt
      661 aatccggcga gcttagtcga tataaacgtt tctaataaca aactaaacgg atcaattcct
      721 aaatcgttag ctaggtttcc ggtaactgca ttctccggca acattaacct ctgcggcagt
      781 ccattacctc cttgcaacaa cacatttttc cctggaccgg cgccgtctcc accgtcaatc
      841 gagccaccgg cggtcggtaa aaaacacaag aaaaaactct caaccggcgc aattgtagca
      901 atcgtgatcg gatcggtgtt gtttctcgct ttactattac taattctgtt actctgttta
      961 cgtaaaaagc ggaatccgaa aacaagacaa gtaacgaaac catcccaggc ggtttcggca
     1021 tcagtcgcgg cctcacgggc cgcgactgaa gcgggaacat cgtcatcgaa agacgatata
     1081 actggggcgt caatggaagg tgaaaggaat aaattagtgt tttttgaggg agggatttat
     1141 agttttgatt tggaagattt attaagggcg tctgcagagg ttttaggtaa aggaagtgta
     1201 gggacttcat ataaagcggt actcgaagaa ggaacaacag ttgttgtgaa acgattgaaa
     1261 gatgttgtgg taacaaaaaa ggaatttgat ttacaaatgg aggttttggg gaagatgaaa
     1321 gatgaaaatg tggttccgtt acgagcttat tattattcta aagatgagaa attgcttgtt
     1381 tatgattact ttcctgctgg tagcttatct gctcttctac atgggagcag aggctctggc
     1441 cggtcaccac ttgattggga ccatcgtatg aggatcgcat tgggtacggc ccgaggggtt
     1501 gcgtacttgc atgttgccgg aaaagtggtt cacggtaaca taaaatcatc aaacgtacta
     1561 ctccgacaag aaactaacaa ggatgcttcg gtatccgatt atggtctaaa cacgctcttt
     1621 ggcgggtcga gcaccccgaa caaccgggtc acgggttacc gggctcccga acttcttgag
     1681 acccgaaaag ctacatttaa atctgatgtg tatagctttg gggtgttatt attggagctt
     1741 ttaacgggta aagcaccgaa ccaagcttcg ttaggtgagg aagggatcga cttgcctcgg
     1801 tgggtccagt cggttgtaag agaagaatgg accgccgagg tgttcgatgt ggagttaatg
     1861 aggtatcaaa atattgaaga agagatggtt cagttattgc aaatagctat ggcgtgtgta
     1921 tcgactgtac ctgatcaacg acccgcaatg caagaagtgg tgaggatgat ggaggatatg
     1981 aatcgggctg aaacagatga cgggttgagg caatcgtcgg atgacccgtc taaggaatcg
     2041 ggcggacata cacctccaac agaggcccgg aactcaccca ataccgtcac accgtaaaac
     2101 cgaacaattg atgtgaagat agagtagagg aaatttttta caaatttttt tacttatttt
     2161 tggtgttttt atgtttattt cattattgaa tatgaatatc agagtataat atgattttta
     2221 tgggtctggg ttgggtacca atgtaccatg ggagttgttt ggaagttgtt attcattggt
     2281 gaacctcaag taaaaaaaaa aaaaaaaaaa aaaaaagatt cttgcaga
//
LOCUS       XR_011778711            1244 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904244), ncRNA.
ACCESSION   XR_011778711
VERSION     XR_011778711.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1244
                     /gene="LOC139904244"
                     /note="uncharacterized LOC139904244; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904244"
     ncRNA           1..1244
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904244"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904244"
ORIGIN      
        1 tgttttgtac tagaagttaa agtcaagtgg ctactgttca tattgcttaa ttttttcatt
       61 tcacccaact tttacacaac tattttgcgt tgttatataa tatactccgt atttagcttt
      121 accatcttat aaaaaagact caggagcaca aatttttata gcacatatac cttgaatgga
      181 aggtcaccag ttcgagattc ctgttgatgt gttcccagcc tgctgtcatg ttgaaatcaa
      241 gattctggtc atgtatacct cgaatagctg caacaatagg aacttggctt catgtattta
      301 agattagcga gcaaggatct tagacattta atatcgggct cttggtagga acctgattgg
      361 gtgaatgcaa agcggacgaa gaatgcaact caagtgccac ataatattgt attcaccaaa
      421 aaatgccatc atccatgact gtagatttgt agcatgctag attcctgtct ccctgacttt
      481 attttgtcag tttttaaact ttgttcattg acataacaac aaaacttatg aaatgtagca
      541 ataatcttga tttgctttga aatgattgga agatttcggt catgaatttc aacacacaca
      601 cacacacata cactatttgt tgtacaggtg tggcacgttt tgctgcgttt gatcatcgat
      661 ttgctataac ttggtggtca aaaacattca gactggtagg ttacttgtgc tatagcttat
      721 tcaaatttct gttttcctga gttcatcata caaagctttg accaagtttc acgtgtttat
      781 acctcatctg tcgccctgat gttagttaca tacactatct actttctcat tgacaatgta
      841 aagaaattca ctgaatttgt tattataaga ggctttttat agttctcatc aaatttagat
      901 tgatattcac accccagaag tttggtgtga caaggattgt tcccgatctt tacccggaag
      961 taagaagccg aggtagtagc cggggtagta aagttgttca ttcgtttaca gtttcttgat
     1021 tctcagtaca taataccatt ttttcagttg tttcaactct gctgaagttt gtaaaggttg
     1081 ttcaatcaag caaatgccga taatgccaag cagttagagt tgaatgaaaa gttgaaacta
     1141 tctccgtctg atatcaatta agtctgaaca tatgtaacac tctctactaa aagagtatga
     1201 gcaaatttgg gcagtctgac cgctaagttt atttgtagtg tgaa
//
LOCUS       XM_071886192            1852 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides monofunctional riboflavin
            biosynthesis protein RIBA 3, chloroplastic-like (LOC139904245),
            mRNA.
ACCESSION   XM_071886192
VERSION     XM_071886192.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1852
                     /gene="LOC139904245"
                     /note="monofunctional riboflavin biosynthesis protein RIBA
                     3, chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 25 Proteins"
                     /db_xref="GeneID:139904245"
     CDS             131..1660
                     /gene="LOC139904245"
                     /codon_start=1
                     /product="monofunctional riboflavin biosynthesis protein
                     RIBA 3, chloroplastic-like"
                     /protein_id="XP_071742293.1"
                     /db_xref="GeneID:139904245"
                     /translation="MDSIIIHHPLSTTFAPPKPPPLSTHKPPNLITCQSLKNTTNNNN
                     QNGSIFNHISPSNDNSQPFNTINAEITPETVDFFTSDAEGDPDCPSEGFSSIEDALQA
                     LRNGKFVIVVDDENGDIEGNFVFAGCFAAPESIGFVMRHGSGIVSVGMTSDDLQRQNL
                     PLMSPESEHNSCAPSFTVTVDADDTSTGVSASDRAKTILALASSSSGPKSFRRPGHVF
                     PLKYRNGGVLRRAGHTEASVDLVKLAGLDPVSVLSTIVNPEDGSIAGLDHLRKLALDH
                     KIPLVLITDLIRYRRKRERLVEKTAISRLPTTWGLFEAHCYRSKLDGTEHIAVVKGDI
                     GNGRDVLVRVHSECLTGDVFGSARCDCGNQLALAMQIIEETGRGALIYLRGHEGRGIG
                     LGHKLQAYNLQDLGHDTVEANLELGFAPDAREYGIGAQMLRDIGVQTMRLMTNNPAKF
                     TGLKGYGLAIVERVPVMTPITDENRRYLETKRTKMGHIYGSDLPNFGKKKLKDTLNID
                     L"
     misc_feature    308..1621
                     /gene="LOC139904245"
                     /note="Bifunctional GTP cyclohydrolase II/
                     3,4-dihydroxy-2-butanone-4-phosphate synthase; Region:
                     PLN02831"
                     /db_xref="CDD:215445"
ORIGIN      
        1 aaatccatta aaacattctg gataaaggaa acatataaca agccacgtta gacaaactca
       61 catccacaac aaaggttctg atcatttcac aaaccaccat ctccgaccac cataatccac
      121 catcaccacc atggactcca tcatcatcca ccacccactc tccaccacct tcgcaccacc
      181 caaaccacca ccactttcca cccacaaacc accaaacttg atcacttgcc aatcactcaa
      241 aaacaccacc aacaacaaca atcaaaatgg ttccattttc aatcacatat caccttcaaa
      301 tgataattca caacctttta atacaattaa tgctgaaata acaccagaga cagtagactt
      361 ttttacaagt gatgctgaag gtgatcctga ttgtccatca gaaggctttt cttcgatcga
      421 agacgctcta caagcactca gaaacggaaa gtttgtgatc gttgtggacg atgaaaacgg
      481 agatattgaa gggaactttg tgtttgcagg gtgttttgct gcgccagaaa gtataggatt
      541 tgtaatgaga cacgggtcgg gtattgtatc ggttggcatg acgtcagatg atctccagag
      601 gcaaaatctt cctttaatgt caccagaaag cgaacacaat tcttgtgctc catcgttcac
      661 tgttaccgtg gatgcagatg atacatcaac tggagtatca gcttcagata gagcgaaaac
      721 gattcttgct ttagcttcta gtagctccgg gcccaaaagt ttcagaaggc ccggccatgt
      781 gtttccttta aaataccgaa atggcggggt tctacgacgg gcgggtcata ctgaggcgtc
      841 cgtggatctc gttaaacttg cgggtctgga tccagtttcg gtcctttcga ctattgtcaa
      901 tccagaagat ggttcgattg cagggttgga tcatctaaga aagctagcac ttgaccacaa
      961 gatcccactt gttttgatca ctgatctcat caggtataga agaaagcggg aaagattagt
     1021 tgaaaaaacc gcgatttcta ggttacctac gacatggggt ttatttgaag ctcattgtta
     1081 ccgctcaaaa ttagacggga ctgagcatat agccgttgta aagggagaca ttgggaacgg
     1141 gcgtgatgtg ttagtaagag ttcattcaga atgtttaacg ggtgacgtat ttggatccgc
     1201 ccgttgtgat tgtggaaacc aattagcgtt agcaatgcaa attatcgaag aaacggggag
     1261 aggggcactt atctaccttc gaggacacga aggtagaggt attggattag gacacaagtt
     1321 acaagcgtat aacttgcaag atctcggtca cgacactgta gaagccaatc tagagctcgg
     1381 ttttgctccc gatgcacgtg aatatggtat cggcgcacag atgcttaggg atattggagt
     1441 tcaaacgatg cgactaatga ctaacaaccc ggctaagttt actgggctga aaggctacgg
     1501 tttggcgatt gttgaacgag ttccagtaat gactccgatt actgatgaaa ataggagata
     1561 cttagaaaca aagagaacaa agatgggtca tatatatggg tctgatttac caaattttgg
     1621 taaaaagaag ttgaaggata cactaaatat agatctataa aacttacact attacaaata
     1681 ttcttactat aatcaataag aataagattg aatatttgta cacatgtata tgcagtacca
     1741 atcaaattgt tctttgaggt cttatagctt aaaaatttga tggaacaatt gtaaaccgat
     1801 tttgtagcca caactgtaaa cagattttgc agttaatgta atgagcctca at
//
LOCUS       XR_011778712             617 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904246), ncRNA.
ACCESSION   XR_011778712
VERSION     XR_011778712.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..617
                     /gene="LOC139904246"
                     /note="uncharacterized LOC139904246; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904246"
     ncRNA           1..617
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904246"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904246"
ORIGIN      
        1 gaagaagggc aacaagtgag atgtgatttt catcaaatta gagtctaaaa ccagagatta
       61 tgtgtattta gaaagtgatt aagcttgtag gtgtagagat ttttggaaga atcatcttat
      121 ttctctcatc tctaaagttt gttccatagc tggtgtgggg cagctgatga aaactgggta
      181 ccggaactcc tgctttgcta accaggtgga gcgttttgta tgtctgtaca caagtcaagt
      241 ttgtaatcta ggcctatact ctcgagacaa gtactatagg ccaagtgagg acttggtggc
      301 ccatgagtcg gatgaacgtt ctttctacaa atatgcagct gtgtagtgct ttcaaagttt
      361 ctcagttcca aaaactgaaa accgttggtc tcagtggata agtctgttat gtgctatgtt
      421 tataattgta gatggtgcag caatttgtgg acttgtttgt taaaatagaa tgatattgaa
      481 accagcaaac tttcaacgtg tttgatgggc tttgattgta ggcagaggtg actatgtgtg
      541 cgggttgggt tggattcgat gagccaacat ggcttcaggt aaaatggttt aatagtttat
      601 tttggggctt tgcttta
//
LOCUS       XM_071886193             617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904247), mRNA.
ACCESSION   XM_071886193
VERSION     XM_071886193.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..617
                     /gene="LOC139904247"
                     /note="uncharacterized LOC139904247; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904247"
     CDS             108..497
                     /gene="LOC139904247"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742294.1"
                     /db_xref="GeneID:139904247"
                     /translation="MAENVGVNEIEEFVYRISTADEWSELQTSKSTFGQQLDKDSNYI
                     HLSNLSQVKSTLERFYLNTTEDLFLLQIDCEKLGDGLIYENVDGTNVFPHFYGPSRSF
                     VPLTLDMVVKAEKLFLSNGQFSCNMLS"
     misc_feature    162..401
                     /gene="LOC139904247"
                     /note="Protein of unknown function (DUF952); Region:
                     DUF952; pfam06108"
                     /db_xref="CDD:428774"
     polyA_site      617
                     /gene="LOC139904247"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaacccgaac acctaacaac tctattaaga tccatagctt aactgagccg ttaaagagaa
       61 acaaaaccct agagtcctag ccatctcttc tggtgaagaa ttaagaaatg gctgaaaacg
      121 ttggtgtgaa tgaaatcgaa gaattcgttt acagaattag tactgccgac gagtggtcgg
      181 aattgcaaac gagtaaatcg acgtttggtc aacaacttga taaagattct aactacattc
      241 atctcagcaa cctcagtcag gtaaagtcga ccttagaaag gttttatttg aatactacgg
      301 aagatctttt cctgctccag attgattgtg aaaagcttgg agatggatta atatatgaaa
      361 acgtggacgg tacaaacgtg tttccccatt tctatggccc atctcgaagt ttcgttcctc
      421 tcacacttga catggttgtc aaagcagaga aactatttct atcaaatggc caatttagct
      481 gcaatatgtt gagctagaaa atgttgtata atttcattta ttgtatactt gtgtgtgctg
      541 gctatgtaat acaatacaat ctgttgtata aataattgta acttatacaa caatgacagc
      601 actaaataat tctcaca
//
LOCUS       XR_011778713            3264 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipase SGR2-like
            (LOC139904248), transcript variant X1, misc_RNA.
ACCESSION   XR_011778713
VERSION     XR_011778713.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3264
                     /gene="LOC139904248"
                     /note="phospholipase SGR2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904248"
     misc_RNA        1..3264
                     /gene="LOC139904248"
                     /product="phospholipase SGR2-like, transcript variant X1"
                     /db_xref="GeneID:139904248"
ORIGIN      
        1 aacctgcatt ataatcgttt gcatcccacg caagactctc cccttaaata tttctcgtag
       61 attcaattta atgattttcc tccaatttct tgtaatccga tattgaaaag catcatttgt
      121 ttgtaaatct catcacgtca cgttttctac gtccaatcaa acacgaaact cgatttaaaa
      181 aaaaaatttg cattacaatt tgatgttcat tttttggtat tgcacaccac ctgtttgatc
      241 aattgcctga acgaaattta ttatcttttc aatgggggaa aacgatgggg ctgaagaggg
      301 gaaagattgt ggtaatatgt tacgaaatac gccgtctaat atacgaagat tggctgatga
      361 aatacaacga tgtgagggca gaaataagta tcttgcacat actaaaagcc cttacgatgg
      421 gggagatgtt aggtggtact ttcgtaaggt tccaatggag aaaaatgagg tagctgctgc
      481 tgtcccgcgt gcagaaatag tagagaagag tgattatttt cgatttggta tgagagattc
      541 tcttgcaata gaggcttcat ttttgcagca agaagaggaa ctgctttcta tttggtggaa
      601 agaatatgct gaatgtagtg aaggtccaaa agggtcaccc gcttcgatat ctaactctga
      661 accactgcta aagccattta tttccgataa ttcacaaaca tatttagatg acgaagaaag
      721 agttggtgta cctgttaaag gaggcttgta tgaggtagac ttggtaagga gacattgttt
      781 cccggtttat tgggacggag ataatcggcg tgttttaaga ggccattggt ttgctcgtaa
      841 aggtgggagt ctggattggc ttccactccg tgaagatgtt tctgaacaat tagagtttgc
      901 ttatcatggc agggtctggc gtcgcagaac atttcaaccg tcaggattat ttgcagcccg
      961 agttgacatg caaggatcta ctcctgggct gcatgctctt tttactggag aggatgacac
     1021 atgggaagct tggctatatg ttggcgcatc aggattttca agcattgtta aattaggtgg
     1081 gaccggcatt aggttaaggc gtggttatgc tccatctctt tcaccaaagc caactcagga
     1141 tgagttacgt caacagaagg aggaagatat ggataattac tgttcacagg ttccagttag
     1201 gcatcttgtg ttcatggtcc atggtattgg tcaaaggttg cagaaagcca atttgattga
     1261 tgatgtcggc attttccgtc acattacttc ttgccttgct gaacaacatc tcacatctta
     1321 tcaacgaaga acacagcgaa ttcttttcat tccatgtcag tggcggaaaa atttaaagct
     1381 tagtggtgaa tctgctgtag aaaaatgtac attacctggt gtacgtgggt tgcgggtaac
     1441 gttaagtgct acagttcacg atgtattata ctacatgagc cctatctact gccaggatat
     1501 tattgactcg gtttcgactc agttaaataa gttattttta aagttcctca agaggaatcc
     1561 tggttatgat ggaaaggttt ctttatatgg ccattcctta ggaagtgtcc tctcttatga
     1621 catcctttgt catcaagaga ctttaactag cccatttcct atggaatgga tttacaaaaa
     1681 taagattaag tatgaaagtt gtacaccaaa tgacatgaaa tcatcttcgg caaattcacg
     1741 ggtcaatgat tttaatgcaa ttgtggatca tgggtctggc catagtccaa acgaatcgct
     1801 taccgagaag gacaatggtt tagatgactg tgcagaaagg gatagtgaag ctttagatac
     1861 aaccgctaat caaattaatg atgataattc tctgcatgat gaaaatacca caattaaatc
     1921 actgagagaa gagattgaca ttttgaatgc tagaattaag gaactagaag agcaaaaagc
     1981 tgaaggagat aaagacgaag tcacaacagt gaaaaacgaa agtgttacca aaggtgcatc
     2041 tttcaaaaat gatacactga agagttacac gcctcttata aactacacaa aattggaatt
     2101 caaggttgat acattctttg cggttgggtc tcctcttgga gtttttcttt cccttcgaaa
     2161 tgtccgtata ggaatcgggg aaggaagaga ttattggaac aatgaaaata ttattgaaga
     2221 gatgccatca tgtcggcaga tgttcaacat atttcatcct tttgatccag tggcatatag
     2281 agtagaacca cttgtttgta aagattatgt gaacacgcgt ccagtcatta ttccttatca
     2341 taaaggtgga aagaggctgc atatcgggtt tcaggaattc gttgaagatg tttcgtcaag
     2401 ttctcaagtg gtaatgaatc gtatgagctc agtaaagggc aaagtactgg cattatgtca
     2461 agcgaaggat ggtgatgttg ttgcaggctc agctgagaca tcagaagatc ccgaagtagt
     2521 ggaaagatcg tatggttcaa taatgctcga gaagttaacg gggagtgaag atgggcggat
     2581 tgatcatgtt ctacaagata aaacattcca gcatcagtac atatccgccg tgggagcaca
     2641 tacatcttat tggaaagact tggatactgc attattcata ctgaaacatc tatataaaga
     2701 cataccagat gaacccgaaa ctccagataa atacatggag gatgaattga atcaagaaac
     2761 tggtgactgg aataggtggt atgataatga agcagcagct gaggaagagc tcccgttgac
     2821 tttttcaaac actaaattcg tgaaaaagtt tacgaggaga gcaaaaagct tcattggtcc
     2881 ttgacttttc tccgaagagc aacggttgtt cttgcaagaa tgccatagaa acatcatagt
     2941 ttgcatgaat gagcgggttt ggtcaagttt cgtaacgtaa atgtgaatta accatcatac
     3001 ccatgtaacc ttttgtccaa aagcattcgt tctttcaaac tgtggccttc ttgttgaaat
     3061 tccctacaac accgatttgt ttgcaaggaa aatacaagta tgatgattaa attgtcaaac
     3121 tgtattttgt ggaaaatgaa attgtacggt tgctttgggg aaggtatgac taggtaacga
     3181 tagattgtag cagcggtcat aatgcatctg tatcaacgca caaggttgga aaactcggaa
     3241 ctcggggatg ttggggagat ctcg
//
LOCUS       XM_071886194            3168 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipase SGR2-like
            (LOC139904248), transcript variant X2, mRNA.
ACCESSION   XM_071886194
VERSION     XM_071886194.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3168
                     /gene="LOC139904248"
                     /note="phospholipase SGR2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904248"
     CDS             272..2884
                     /gene="LOC139904248"
                     /codon_start=1
                     /product="phospholipase SGR2-like"
                     /protein_id="XP_071742295.1"
                     /db_xref="GeneID:139904248"
                     /translation="MGENDGAEEGKDCGNMLRNTPSNIRRLADEIQRCEGRNKYLAHT
                     KSPYDGGDVRWYFRKVPMEKNEVAAAVPRAEIVEKSDYFRFGMRDSLAIEASFLQQEE
                     ELLSIWWKEYAECSEGPKGSPASISNSEPLLKPFISDNSQTYLDDEERVGVPVKGGLY
                     EVDLVRRHCFPVYWDGDNRRVLRGHWFARKGGSLDWLPLREDVSEQLEFAYHGRVWRR
                     RTFQPSGLFAARVDMQGSTPGLHALFTGEDDTWEAWLYVGASGFSSIVKLGGTGIRLR
                     RGYAPSLSPKPTQDELRQQKEEDMDNYCSQVPVRHLVFMVHGIGQRLQKANLIDDVGI
                     FRHITSCLAEQHLTSYQRRTQRILFIPCQWRKNLKLSGESAVEKCTLPGVRGLRVTLS
                     ATVHDVLYYMSPIYCQDIIDSVSTQLNKLFLKFLKRNPGYDGKVSLYGHSLGSVLSYD
                     ILCHQETLTSPFPMEWIYKNKIKYESCTPNDMKSSSANSRVNDFNAIVDHGSGHSPNE
                     SLTEKDNGLDDCAERDSEALDTTANQINDDNSLHDENTTIKSLREEIDILNARIKELE
                     EQKAEGDKDEVTTVKNESVTKGASFKNDTLKSYTPLINYTKLEFKVDTFFAVGSPLGV
                     FLSLRNVRIGIGEGRDYWNNENIIEEMPSCRQMFNIFHPFDPVAYRVEPLVCKDYVNT
                     RPVIIPYHKGGKRLHIGFQEFVEDVSSSSQVVMNRMSSVKGKVLALCQAKDGDVVAGS
                     AETSEDPEVVERSYGSIMLEKLTGSEDGRIDHVLQDKTFQHQYISAVGAHTSYWKDLD
                     TALFILKHLYKDIPDEPETPDKYMEDELNQETGDWNRWYDNEAAAEEELPLTFSNTKF
                     VKKFTRRAKSFIGP"
     misc_feature    2093..2695
                     /gene="LOC139904248"
                     /note="DDHD domain; Region: DDHD; pfam02862"
                     /db_xref="CDD:460725"
ORIGIN      
        1 aacctgcatt ataatcgttt gcatcccacg caagactctc cccttaaata tttctcgtag
       61 attcaattta atgattttcc tccaatttct tgtaatccga tattgaaaag catcatttgt
      121 ttgtaaatct catcacgtca cgttttctac gtccaatcaa acacgaaact cgatttaaaa
      181 aaaaaatttg cattacaatt tgatgttcat tttttggtat tgcacaccac ctgtttgatc
      241 aattgcctga acgaaattta ttatcttttc aatgggggaa aacgatgggg ctgaagaggg
      301 gaaagattgt ggtaatatgt tacgaaatac gccgtctaat atacgaagat tggctgatga
      361 aatacaacga tgtgagggca gaaataagta tcttgcacat actaaaagcc cttacgatgg
      421 gggagatgtt aggtggtact ttcgtaaggt tccaatggag aaaaatgagg tagctgctgc
      481 tgtcccgcgt gcagaaatag tagagaagag tgattatttt cgatttggta tgagagattc
      541 tcttgcaata gaggcttcat ttttgcagca agaagaggaa ctgctttcta tttggtggaa
      601 agaatatgct gaatgtagtg aaggtccaaa agggtcaccc gcttcgatat ctaactctga
      661 accactgcta aagccattta tttccgataa ttcacaaaca tatttagatg acgaagaaag
      721 agttggtgta cctgttaaag gaggcttgta tgaggtagac ttggtaagga gacattgttt
      781 cccggtttat tgggacggag ataatcggcg tgttttaaga ggccattggt ttgctcgtaa
      841 aggtgggagt ctggattggc ttccactccg tgaagatgtt tctgaacaat tagagtttgc
      901 ttatcatggc agggtctggc gtcgcagaac atttcaaccg tcaggattat ttgcagcccg
      961 agttgacatg caaggatcta ctcctgggct gcatgctctt tttactggag aggatgacac
     1021 atgggaagct tggctatatg ttggcgcatc aggattttca agcattgtta aattaggtgg
     1081 gaccggcatt aggttaaggc gtggttatgc tccatctctt tcaccaaagc caactcagga
     1141 tgagttacgt caacagaagg aggaagatat ggataattac tgttcacagg ttccagttag
     1201 gcatcttgtg ttcatggtcc atggtattgg tcaaaggttg cagaaagcca atttgattga
     1261 tgatgtcggc attttccgtc acattacttc ttgccttgct gaacaacatc tcacatctta
     1321 tcaacgaaga acacagcgaa ttcttttcat tccatgtcag tggcggaaaa atttaaagct
     1381 tagtggtgaa tctgctgtag aaaaatgtac attacctggt gtacgtgggt tgcgggtaac
     1441 gttaagtgct acagttcacg atgtattata ctacatgagc cctatctact gccaggatat
     1501 tattgactcg gtttcgactc agttaaataa gttattttta aagttcctca agaggaatcc
     1561 tggttatgat ggaaaggttt ctttatatgg ccattcctta ggaagtgtcc tctcttatga
     1621 catcctttgt catcaagaga ctttaactag cccatttcct atggaatgga tttacaaaaa
     1681 taagattaag tatgaaagtt gtacaccaaa tgacatgaaa tcatcttcgg caaattcacg
     1741 ggtcaatgat tttaatgcaa ttgtggatca tgggtctggc catagtccaa acgaatcgct
     1801 taccgagaag gacaatggtt tagatgactg tgcagaaagg gatagtgaag ctttagatac
     1861 aaccgctaat caaattaatg atgataattc tctgcatgat gaaaatacca caattaaatc
     1921 actgagagaa gagattgaca ttttgaatgc tagaattaag gaactagaag agcaaaaagc
     1981 tgaaggagat aaagacgaag tcacaacagt gaaaaacgaa agtgttacca aaggtgcatc
     2041 tttcaaaaat gatacactga agagttacac gcctcttata aactacacaa aattggaatt
     2101 caaggttgat acattctttg cggttgggtc tcctcttgga gtttttcttt cccttcgaaa
     2161 tgtccgtata ggaatcgggg aaggaagaga ttattggaac aatgaaaata ttattgaaga
     2221 gatgccatca tgtcggcaga tgttcaacat atttcatcct tttgatccag tggcatatag
     2281 agtagaacca cttgtttgta aagattatgt gaacacgcgt ccagtcatta ttccttatca
     2341 taaaggtgga aagaggctgc atatcgggtt tcaggaattc gttgaagatg tttcgtcaag
     2401 ttctcaagtg gtaatgaatc gtatgagctc agtaaagggc aaagtactgg cattatgtca
     2461 agcgaaggat ggtgatgttg ttgcaggctc agctgagaca tcagaagatc ccgaagtagt
     2521 ggaaagatcg tatggttcaa taatgctcga gaagttaacg gggagtgaag atgggcggat
     2581 tgatcatgtt ctacaagata aaacattcca gcatcagtac atatccgccg tgggagcaca
     2641 tacatcttat tggaaagact tggatactgc attattcata ctgaaacatc tatataaaga
     2701 cataccagat gaacccgaaa ctccagataa atacatggag gatgaattga atcaagaaac
     2761 tggtgactgg aataggtggt atgataatga agcagcagct gaggaagagc tcccgttgac
     2821 tttttcaaac actaaattcg tgaaaaagtt tacgaggaga gcaaaaagct tcattggtcc
     2881 ttgacttttc tccgaagagc aacggttgtt cttgcaagaa tgccatagaa acatcatagt
     2941 ttgcatgaat gagcgggttt ggtcaagttt cgtaacgtaa atgtgaatta accatcatac
     3001 ccatgtaacc ttttgtccaa aagcattcgt tctttcaaac tgtggccttc ttgttgaaat
     3061 tccctacaac accgatttgt ttgcaaggaa aatacaagta tgatgattaa attgtcaaac
     3121 tgtattttgt ggaaaatgaa attgtacggt atgtaaaaga tgatttag
//
LOCUS       XM_071886195            1583 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sodium/pyruvate
            cotransporter BASS2, chloroplastic-like (LOC139904249), mRNA.
ACCESSION   XM_071886195
VERSION     XM_071886195.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1583
                     /gene="LOC139904249"
                     /note="sodium/pyruvate cotransporter BASS2,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139904249"
     CDS             99..1334
                     /gene="LOC139904249"
                     /codon_start=1
                     /product="sodium/pyruvate cotransporter BASS2,
                     chloroplastic-like"
                     /protein_id="XP_071742296.1"
                     /db_xref="GeneID:139904249"
                     /translation="MASISRIVAKDCNFLSHDAVLHRPRLRGIHNHISFRSGVTSIGD
                     VNRPLALDNNRFCSSILQSLNSRSSKIVCQAATNVPGDVPANVDSSSGMTTYEKVIET
                     LTTLFPLWVIIGTVVGIYKPSAVTWLQTDLFTVGLGFLMLSMGLTLTFEDFRRCLRNP
                     WTVGVGFLAQYLIKPMLGFFIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNV
                     ALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVLLPTILGVLMNEY
                     LPKFTSKIITVTPLIGVLLTTLLCASPIGQVADVLKTQGLQLLLPVAALHAAAFFIGY
                     AISKLSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSAL
                     AVYWRNQPIPVDDKDDFKE"
     misc_feature    414..1298
                     /gene="LOC139904249"
                     /note="Predicted Na+-dependent transporter YfeH [General
                     function prediction only]; Region: YfeH; COG0385"
                     /db_xref="CDD:440154"
     polyA_site      1583
                     /gene="LOC139904249"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccctccaatc caattttgaa acaaaactca tgctcaatta atgcttacac tactatacaa
       61 tacccaattt cactctcacc caattttatc ggtctttaat ggcgtctatt tcaagaattg
      121 ttgctaaaga ttgtaacttt ctatcacatg atgctgttct tcatagaccc agattaagag
      181 gaattcataa tcatatttct tttagaagtg gggttacttc aattggagat gtgaacaggc
      241 ctttggctct tgacaataat agattctgct catcaattct tcaatctttg aactcgagga
      301 gctcaaaaat tgtttgtcaa gcagcaacga atgtaccagg agatgttcct gccaatgtcg
      361 attcctcgag tggcatgaca acatatgaaa aagttattga aacattgaca accctttttc
      421 cgttatgggt tattataggt acagttgttg ggatttacaa gccttccgct gttacttggt
      481 tacaaacaga cctttttact gttggtttgg gttttctcat gctttctatg gggttgacac
      541 taacatttga ggatttcaga cgttgcttac ggaatccatg gactgtaggt gtagggtttc
      601 ttgcccaata cttgatcaaa cccatgttag gattcttcat tgcaatgact ctaaagttat
      661 ccgctccact tgcaactggt ttgattctcg tttcgtgttg ccccgggggc caagcatcaa
      721 acgttgcaac ttatatatct aaaggaaatg tagcactttc tgttctcatg acaacatgtt
      781 caacgattgg tgcaattatc atgacaccgc tcctcactaa acttttagct ggtcaacttg
      841 ttccggttga tgcagcagga cttgccctta gtacttttca ggttgttttg ctacccacaa
      901 tacttggagt tttgatgaat gaatatctac caaaattcac gtcaaaaatc attacggtga
      961 cacctttgat tggagttctc cttacgactc ttctttgtgc aagtccgatt gggcaagttg
     1021 ctgatgtttt gaaaacacaa ggtttacaac tattacttcc ggtggccgcc cttcacgcgg
     1081 cagcattttt tattggttat gcaatttcta aattatcatt tggcgagtct acatctcgta
     1141 cgatctccat agaatgtggg atgcagagct ctgcactcgg ttttttgctt gcgcaaaagc
     1201 attttacaaa ccctcttgta gctgtacctt ctgctgttag cgttgtatgc atggcgcttg
     1261 gtggaagtgc tttagctgtg tattggagga accaaccaat tcctgttgat gacaaagatg
     1321 atttcaagga gtaaattctt gtagcttttc tggtttttat tattagtacg agtaattgct
     1381 atcctatgtt ttaggtcgaa ttttgccata ctggaaatag tcgaattcag acaatggctt
     1441 gcatattctg cagtaatagt ttatttaatg ttgtaaagac ggttttagtt gattcaggaa
     1501 gagcaaggat tttgctagtt aatgtgtctc tttgtattgt attacttcgg attaatatga
     1561 agtgtcatta gattttttat tta
//
LOCUS       XM_071886196            4567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter G family
            member 32 (LOC139904250), mRNA.
ACCESSION   XM_071886196
VERSION     XM_071886196.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4567
                     /gene="LOC139904250"
                     /note="ABC transporter G family member 32; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 51 Proteins"
                     /db_xref="GeneID:139904250"
     CDS             79..4338
                     /gene="LOC139904250"
                     /codon_start=1
                     /product="ABC transporter G family member 32"
                     /protein_id="XP_071742297.1"
                     /db_xref="GeneID:139904250"
                     /translation="MWNYSENLSARSSSFREDGDDEEALRWAAIERLPTYNRVRKGVF
                     TSMIGDSKEVVDVNKLEIEELKVVLDRLLNSADDDWKRFFDRMRRRFDAVDLEFPKIE
                     VRFQNLKVETFFHVGSRALPTITNFIVNMTEAFLRQLRIYKGKRRKLTILDDVSGIIR
                     PSRMTLLLGPPSSGKTTLLLALAGRLDPQLQTSGNITYNGHGLKEFVPQRTSAYVSQQ
                     DWHIAEMTVKETLDLSARCQGVGFKYDMLMELARREKIAGIRPDEDLDIFMKALALGG
                     HETSLVVEYILKILGLDTCENTMVGDEMLRGISGGQKKRLTTGELLVGPSRVLLMDEI
                     SNGLDSSTTYQIIKYLRHSTHALDGTTMISLLQPAPETYDLFDDIILICEGHIVYQGP
                     RSAALDFFAYMGFHCPKRKNVADFLQEVVSEKDQEQYWSVPDRSYRYISVKKFAEAFR
                     SYRVGKNLVEELNIPFDKQYNHPAALSTSRYGVKIGELLRTSFNWQLLLMQRNSFIYV
                     FKFIQLLMVAVITMSVFFRSTLHHRTVDDGGLYLGELYFSMVILLFNGFTEVSLLVAK
                     LPVIYKHRDLHFYPPWVYTLPSWVLSIPTSLIESGIWVVVSYYVVGLDPNIIRFLKQF
                     LLFFFLHQMSISLFRLMGALGRNMIVANTFGSFAMLIVMALGGYVISRDSIPKWWIWG
                     FWISPLMYAQNAASVNEFLGHSWNKRDNQSTATLGERLLKTRSIFPQTYWYWIGLGAL
                     LGYTILFNALFTFFLSYLNPLGKSHAVVSEESKGKDGKKNAESVVIQLREFLEHSGSF
                     TGKNINQRGMVLPFQPLSMAFSNINYYVDIPLELKQQGVAEDRLQLLVNVTGAFRPGV
                     LTALVGVSGAGKTTLMDVLAGRKTGGVIEGSIHISGYPKSQETFARISGYCEQNDIHS
                     PCLTVLESLLFSAWLRLPSDVDYKTQKIFVDEVMELVELTTLKGALVGLPGVDGLSTE
                     QRKRLTIAVELVANPSIVFMDEPTSGLDARSAAIVMRTVRNIVNTGRTIVCTIHQPSI
                     DIFEAFDELLFMKRGGQLIYAGPLGPRSCKLVEYFEAIEGVRKIKAGHNPATWMLDVT
                     SPLEETRLGVDFAEVYRQSKLFRRNRDLVERLKKPRIDSKELHFPTKYSRSYMDQFAT
                     CLWKQYLSYWRNPQYTAVRFFYTSIISLMLGTICWKFGSKRESQQDLFNAMGSMYVAV
                     LFIGITNATAVQPVVSVERFVSYRERAAGMYSALPFAFAQGAIEFPYVLAQALIYSTI
                     FYLLAAFEWTTWKFIWYIYFMYVTMLYFTFYGMMTTAVTPNHNVAAIIAAPFYMLWNL
                     FSGFMIPHKRIPIWWRWYYWANPIAWTLYGLVVSQYGDLNNPVMLSDGVTTLPIKVLV
                     NNVFGYRRDFLGVAVFMVFGFCFLFAVIFAFAIKSFVFQKR"
     misc_feature    103..4335
                     /gene="LOC139904250"
                     /note="ABC transporter G family member; Provisional;
                     Region: PLN03140"
                     /db_xref="CDD:215599"
ORIGIN      
        1 ataaatgcta agctcaacca ctagacccaa aatgtaaatg cagctataca tacaacacac
       61 tggttttatt atacttcaat gtggaattat tctgaaaatt tgtcggccag atcgtcgtca
      121 tttcgtgaag acggtgatga cgaagaggcg ttacgatggg cggcgattga gagattgccg
      181 acgtataatc gagtccgtaa aggtgtattt acgagtatga ttggtgattc gaaggaagta
      241 gttgatgtta ataagcttga aattgaggag ctgaaagttg tgttagatcg gttgttgaat
      301 tctgccgatg atgattggaa gcggtttttc gatcgaatgc gacgtcgttt tgatgcggtg
      361 gatttggaat ttccaaagat tgaagtcaga tttcagaatt tgaaagtaga aacatttttt
      421 catgttggta gtagagcatt gccaaccatt accaatttca ttgttaacat gactgaggct
      481 ttcttaagac aattaaggat ttacaagggg aagcggagaa aactgacaat tttggatgat
      541 gttagtggga taattaggcc ttcaaggatg acgctgcttc ttggtcctcc gagttctgga
      601 aagacaactc tgttgttggc cttggcaggc cgtcttgacc cgcagttgca gacgtcagga
      661 aatatcactt acaatgggca tggtctgaag gagtttgttc ctcagagaac atcagcttat
      721 gttagtcaac aagattggca tattgcagag atgactgtta aggaaactct tgatttatct
      781 gcacgttgtc aaggtgttgg atttaaatac gatatgctta tggaacttgc aagaagagaa
      841 aaaattgctg gaattaggcc tgatgaagat ctggatattt ttatgaaggc gttagcttta
      901 gggggacatg agacatctct tgtggtggag tatattttaa agattttagg cttggataca
      961 tgtgaaaata ccatggttgg agatgaaatg cttaggggca tctccggggg ccaaaagaaa
     1021 cggcttacga caggtgaact attggtgggt ccatctagag ttcttctcat ggatgaaata
     1081 tcgaatggcc ttgatagttc aaccacatat caaataataa agtatcttag gcattcgacc
     1141 cacgcacttg atgggaccac aatgatttct cttcttcaac ctgctccaga gacgtacgat
     1201 ttgtttgatg atataattct catatgtgaa ggtcatattg tatatcaagg tccacgaagt
     1261 gccgctcttg atttcttcgc atatatgggg tttcactgcc cgaaaagaaa gaacgttgca
     1321 gacttccttc aagaagttgt ttctgaaaag gatcaagaac aatattggtc tgttccagat
     1381 cgatcttacc gttacatatc tgtcaaaaag tttgcagaag catttcgttc ataccgagtt
     1441 ggaaaaaacc tagtcgagga actaaacatt ccatttgata agcagtacaa tcatcctgca
     1501 gccttatcca cttctcgtta cggtgtcaag ataggagaac ttcttagaac aagctttaat
     1561 tggcaattgc ttctgatgca acgaaactcg tttatctacg tttttaaatt cattcagctt
     1621 ctgatggttg cagttatcac aatgagtgtc ttctttcgga gtactttaca tcatagaacg
     1681 gttgatgatg gaggcttata tctcggggaa ctctattttt ctatggttat tcttcttttt
     1741 aacggtttca cagaagtttc gttgttagtt gccaagcttc cggtgatcta caagcataga
     1801 gacttgcatt tctatcctcc ttgggtttat acacttccat cttgggtttt aagtatccca
     1861 acttcactca ttgagtcggg tatctgggtg gtagtttcgt actatgttgt tgggctcgat
     1921 ccaaatatta tcaggttctt aaagcagttt ctactatttt tcttcctgca ccaaatgtct
     1981 attagtctgt ttcggttaat gggagcattg ggccgtaata tgattgtggc taataccttt
     2041 ggatctttcg caatgctgat tgtcatggct cttggtggat atgtaatttc acgagatagt
     2101 ataccgaaat ggtggatttg gggattttgg atttctcctt tgatgtatgc tcaaaatgca
     2161 gcatccgtga atgagtttct tgggcactcg tggaataaaa gagacaacca atcaacagca
     2221 actttaggcg agaggttgct aaaaacacgc agtattttcc ctcagacgta ttggtattgg
     2281 attggtcttg gtgccttgct tggatatact attttgttca atgctctttt caccttcttc
     2341 ctatcttacc ttaatccgtt gggaaagagt cacgctgttg tttcagaaga aagtaagggc
     2401 aaagatggaa aaaagaatgc tgaaagtgtt gtcattcagc tcagagagtt tttggagcat
     2461 tcaggctctt tcactggaaa gaatatcaat caaagaggca tggttctacc atttcagcca
     2521 ctgtccatgg cattcagtaa tatcaattac tatgttgata tccctttgga actgaagcaa
     2581 caaggggttg cagaagatag attgcagttg ctggtaaatg ttactggtgc attcagacct
     2641 ggtgtgctta ctgcgttagt cggggtcagt ggtgctggta agacaacctt aatggatgtt
     2701 ttagctggac gaaaaacggg tggagtaata gaaggaagta ttcatatttc tggatatcca
     2761 aaatcacaag aaacatttgc tagaatatct ggttactgtg agcagaacga cattcattcg
     2821 ccttgtttga ctgttctaga atcacttctc ttttcagcct ggcttcgttt accatcagat
     2881 gtcgattata aaacacaaaa gatttttgtt gatgaggtga tggaacttgt tgagctcact
     2941 acactgaaag gtgcactggt tggtctgcct ggtgttgatg gcttgtcaac cgagcaaaga
     3001 aaacgtctaa ctatagctgt tgagttagtt gccaacccgt ctattgtatt catggacgag
     3061 cccacatccg gacttgatgc aaggtctgca gctatagtga tgaggacagt gaggaacatc
     3121 gtgaacacgg gaagaacgat cgtttgcacg attcaccaac ccagcattga cattttcgag
     3181 gcctttgatg agctcctatt tatgaagcga ggagggcaac tcatttatgc aggtccactt
     3241 ggccccagat catgcaaact tgtcgagtat tttgaggcaa tcgaaggagt tcggaaaata
     3301 aaagctggac ataatcctgc aacttggatg ttagatgtca cttcaccatt agaagaaacc
     3361 cgattaggtg tagacttcgc cgaagtctat agacaatcca aattatttcg acgcaataga
     3421 gatttggttg aaaggctaaa aaaacctaga attgattcaa aagaattgca ttttccaacc
     3481 aagtactcgc gatcgtacat ggatcagttt gctacttgtc tttggaagca gtacctttcc
     3541 tattggcgaa atccacagta cactgcagtt cggtttttct acacctctat catatcactg
     3601 atgcttggaa ctatatgttg gaaatttggt tcaaaaaggg agagtcagca ggatttgttt
     3661 aacgccatgg gatcaatgta cgtagcagta ttgtttatag gaattacgaa tgccaccgca
     3721 gtccaacctg ttgtttctgt tgaaagattt gtttcataca gagagagggc tgctggtatg
     3781 tattcggctc tacctttcgc ctttgctcag ggtgcaattg agtttcctta tgtgttggca
     3841 caagctctta tctacagtac catattctac ttgctagctg catttgaatg gactacttgg
     3901 aaatttatat ggtacatata ctttatgtac gtaacgatgc tatacttcac attctatggg
     3961 atgatgacaa ctgctgtaac acctaatcac aatgtcgctg ccattattgc tgctccattt
     4021 tacatgctat ggaacctctt cagtggattt atgatccctc ataagagaat cccaatctgg
     4081 tggagatggt actattgggc taaccctata gcatggactc tttatggtct tgtggtatcc
     4141 cagtatggtg atttgaataa cccggtgatg ttatcggatg gtgttacgac tttgccgata
     4201 aaagtattag tcaacaatgt attcggttac agacgagatt tcctaggtgt tgcggtattt
     4261 atggtgttcg gcttctgttt cttgtttgca gtcatctttg cttttgccat caaatcattc
     4321 gtcttccaaa agagataaaa ataaggaaac tgaaagtctg tttgtatgca ttacgtttgt
     4381 gtatcattta aaggtactat caaaatactg tagaaaatac ttcaaattaa ggttatatag
     4441 agaaaatgtt gtagagggca tgtaacatgt taagatttat ttacattttt tttcttttgg
     4501 ttgaataata gcgactgatg ctgggaagaa gattgtgtag ttgtaaaaaa cttacaaata
     4561 tctaagt
//
LOCUS       XM_071886197            1187 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904251), mRNA.
ACCESSION   XM_071886197
VERSION     XM_071886197.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1187
                     /gene="LOC139904251"
                     /note="uncharacterized LOC139904251; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139904251"
     CDS             212..853
                     /gene="LOC139904251"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742298.1"
                     /db_xref="GeneID:139904251"
                     /translation="MSLFFRLRHRLPNGFCSKTICSPIIALDSIKTCLTRNFSQPARQ
                     VEEEEEEIEIDQRRLPTDYDPATFNPTEHRSPPTDRVWRLVDEMSSLTLDEVAELSSI
                     MMEKMGMKELPTVAVMKSRAAAGLVGGKGQTAAKEKAKPEKTVFELKLDSFEAASKIK
                     IIKEVRSYTDLGLKEAKEVVEKAPIVFKKGVTKEEAGQIIEKMKSVGAKVVME"
     misc_feature    449..847
                     /gene="LOC139904251"
                     /note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
                     refers to the large ribosomal subunit proteins L7 and L12,
                     which are identical except that L7 is acetylated at the N
                     terminus. It is a component of the L7/L12 stalk, which is
                     located at the surface of...; Region: Ribosomal_L7_L12;
                     cd00387"
                     /db_xref="CDD:100102"
     misc_feature    order(455..457,464..466,476..478,515..517,530..532)
                     /gene="LOC139904251"
                     /note="peripheral dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:100102"
     misc_feature    order(485..493,500..505,512..514,521..523,566..568,
                     575..580,584..586,608..613,641..646,710..712,716..721,
                     725..727,731..736,776..781,785..787,794..796)
                     /gene="LOC139904251"
                     /note="core dimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:100102"
     misc_feature    order(497..499,506..511,521..523,530..532)
                     /gene="LOC139904251"
                     /note="L10 interface [polypeptide binding]; other site"
                     /db_xref="CDD:100102"
     misc_feature    order(683..688,695..700,707..709,728..733,740..742)
                     /gene="LOC139904251"
                     /note="L11 interface [polypeptide binding]; other site"
                     /db_xref="CDD:100102"
     misc_feature    order(686..688,698..700,707..709,728..733,740..742)
                     /gene="LOC139904251"
                     /note="putative EF-Tu interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:100102"
     misc_feature    order(686..688,695..700,707..709)
                     /gene="LOC139904251"
                     /note="putative EF-G interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:100102"
     polyA_site      1187
                     /gene="LOC139904251"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttagtagtt tgtaatttgt attctgcaat tgtaatttga atgggttccc gggtcacccg
       61 tactcttaat ttggtcatat tgcagttcat agctgctcac tcatatttgt tcttttcttt
      121 tttgcagaca gctaactcca acaacagctt gcaaatggtt tgattatagg tcagtcatta
      181 acgaaactag tgatcataaa tagtcttaaa aatgagtttg ttttttaggc ttaggcatcg
      241 tttacccaat ggattctgtt ctaaaactat atgttctccc attattgcac ttgattctat
      301 aaaaacatgt ttgactcgaa actttagtca gcctgcaaga caagtagaag aagaagaaga
      361 agaaattgag attgaccaaa ggaggctgcc aactgattat gatcctgcaa catttaaccc
      421 aactgaacac cgcagcccac caacagaccg tgtttggaga ctagtagatg aaatgtcttc
      481 acttacgtta gatgaggtgg cggaactatc gtcaataatg atggagaaaa tgggaatgaa
      541 ggagctgcca actgtggcgg tgatgaaatc tagagctgct gctgggttag tgggtggaaa
      601 aggtcaaacg gctgcaaaag aaaaggcaaa acctgaaaaa actgtttttg aactgaaatt
      661 ggattcgttt gaagcagctt cgaagatcaa aattattaag gaggtgagga gctatactga
      721 tcttgggctt aaggaagcta aggaggtagt tgaaaaggca ccaattgtgt tcaagaaagg
      781 tgtgacgaaa gaagaagcag gacaaataat cgagaaaatg aaaagcgttg gtgctaaagt
      841 tgtgatggag taacaaaagt tatctatgat caacatgaag aatgcaaaaa gattgagaaa
      901 attatgctca taaggtaccc cttaaccttt acattacatt tcacaggcca aaagaaaaag
      961 aaaaaaaaat gtgttcattt tatgttcaag ttgagttctt attgaattgt tatcgttagc
     1021 tttaggaatc tagcagcata aaactacttg tatgtaaatc atttccaagt gggagagtgt
     1081 ggattccaat tatctttttc accctattga aaatgaaaat gtatgctaag aacaaaattc
     1141 aattatttga tacccttctt tgattcaata gattttatct tttgaga
//
LOCUS       XM_071886198            2032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine protein
            phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
            (LOC139904252), mRNA.
ACCESSION   XM_071886198
VERSION     XM_071886198.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2032
                     /gene="LOC139904252"
                     /note="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' kappa isoform-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins"
                     /db_xref="GeneID:139904252"
     CDS             151..1749
                     /gene="LOC139904252"
                     /codon_start=1
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' kappa isoform-like"
                     /protein_id="XP_071742299.1"
                     /db_xref="GeneID:139904252"
                     /translation="MSIFVPESPGLLLASNSTIPTMLKQILAKLPLKSSKSNSNYSDG
                     SNATPDLGNNGSFTNTCNVISSRLNVVKKMSSSIFPTSNGDNTIQPHLAFKDVLNSEK
                     SKLFISKLHLCSIIYDFNDHDKDNIEKDLKRQVLVEILDFLASESIKLGENIMSAICK
                     MCGDNLFREFPPKYSNPNSPRGETDDDDPWFDPAWSHLQLVYEILLRFVSINSLDPKI
                     AKQYIDHAFLLRLLNLFDSEDPRERECLKSVLHRIYGKFMVHRPFIRMSVSNIIYRFV
                     FETEKHNGVAELLEIFGSVISGFALPLKKEHKMFLSRVLIPLHKPKSIGNYHQQLTYC
                     IVQFIEKEPKLMTVVISGLLKYWPVTSSQKQLMFLSELEELLELIRTDEFEKVMVPLF
                     TRISYCLESYHFQVAERSHFLWNNEHIKHLIMCNRQVILPIVFSSLQYNSKNHWNRTV
                     LNLTQNVMKMFNEVDEALVLSCQSKFEEDKSATTVVAERRQLTWDRLENVAGGGSFQP
                     VVGSVSVLENTATATATATCAVSC"
     misc_feature    280..>480
                     /gene="LOC139904252"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); Region: B56; cl27532"
                     /db_xref="CDD:474937"
     misc_feature    445..1653
                     /gene="LOC139904252"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); Region: B56; pfam01603"
                     /db_xref="CDD:460264"
ORIGIN      
        1 aaaagaaaga aacagagatg ggctccattt tcaccattat tgttatgtct tcaatctcaa
       61 gattttaact tgaaattctc tctctcttct accttttttt ctatctaatt tgcatgtctt
      121 cttctctttg attatatctc cccaaaaccc atgtccattt ttgtgccaga aagcccaggc
      181 ttattattgg cttcaaattc gactattccg actatgctta agcaaattct tgcgaaactc
      241 ccccttaaat catcgaaatc caattcaaat tattcagatg gaagcaatgc aacccctgat
      301 ttgggcaaca atggcagctt cactaacact tgtaacgtta tttcaagtcg attaaacgtt
      361 gtaaaaaaga tgtcctcatc tattttccct acatcaaatg gcgataatac gatccaacct
      421 catcttgcat ttaaagatgt ccttaattca gaaaaatcga aactttttat cagtaagtta
      481 catctttgct cgatcatata cgatttcaat gatcatgaca aagataacat tgagaaagat
      541 ctaaaacgtc aagttttagt cgagattctt gattttctag cttctgaatc tataaagctc
      601 ggcgaaaata tcatgtcagc gatctgtaaa atgtgtggtg acaatctttt tcgtgagttc
      661 cctccaaaat actccaatcc caattcgcca cgtggcgaaa cagacgacga cgacccatgg
      721 tttgatcctg cgtggtcaca tttgcaactt gtttatgaaa tactcctccg attcgttagt
      781 attaattctc ttgatccaaa aattgctaaa caatatattg atcacgcgtt cttgttaaga
      841 ttactcaatc tcttcgattc agaggaccca agagaacgtg aatgtttaaa gtcagtttta
      901 catagaattt atggcaaatt catggttcat agacctttta ttcgaatgtc tgtcagcaat
      961 attatctacc ggtttgtttt tgaaaccgaa aaacacaacg gggttgccga attattggag
     1021 atttttggta gtgtgattag tggattcgcg ttgcccttaa aaaaagaaca caagatgttt
     1081 ttgtcacgtg ttttgattcc tcttcataaa ccgaaatcca ttggtaatta tcatcagcag
     1141 ctaacgtact gcatagttca gtttatagag aaggaaccaa aacttatgac tgttgttatc
     1201 agtgggctgt taaaatattg gcccgtaaca agtagtcaga agcagttaat gttcttaagt
     1261 gagttggaag agttgctcga gttgattcgt acagatgagt ttgagaaagt tatggttccg
     1321 ttgtttaccc gtattagtta ttgtctcgag agctaccatt ttcaggtggc agaacgatca
     1381 cacttcttat ggaacaacga acacataaaa catctaataa tgtgtaaccg acaagtaatt
     1441 ttgccaatag tcttctcgtc attacaatac aactcaaaga atcattggaa tcggacagtg
     1501 ctcaacctaa cacaaaatgt gatgaagatg tttaacgagg tagacgaggc gttggtgctc
     1561 tcatgccaaa gtaagttcga ggaagacaaa tcagccacta ccgtggtggc tgagaggcgg
     1621 caactgacat gggaccgcct cgagaacgtt gctggcggtg gcagtttcca acctgtagtt
     1681 ggaagtgttt cggttttaga gaacactgcc actgccaccg ccaccgccac gtgtgctgtt
     1741 tcttgttaac gaagtaattt gttacgatta caagtattgt tttagaaggg aattgcaaga
     1801 agcactaatg tttgatattg tttttttttt tgagtgttgc tctcggtaca acaatggtgt
     1861 ttatgtgtat attagtggcg ttgtgtcaat tattttggtc atttgtagtg ctaattagat
     1921 tagatgtagt atatgtgaag atgggccatt aaactttcct tagaatagta atccttgtta
     1981 gctacaataa tggttaagat taagaatagt ctttataact ataaaagtat gt
//
LOCUS       XM_071886199            1582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904254), transcript variant X1, mRNA.
ACCESSION   XM_071886199
VERSION     XM_071886199.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1582
                     /gene="LOC139904254"
                     /note="uncharacterized LOC139904254; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904254"
     CDS             374..1339
                     /gene="LOC139904254"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742300.1"
                     /db_xref="GeneID:139904254"
                     /translation="MAGGGIKKDDSIAINSTNVFAALGSLKKKKKSDKDSKKGSVSKT
                     KKESKKEPEPVFWAPAPLTVKSWADVDDEDDDDYYATTAPPPVWGGGAGMHQEKVTPV
                     EESGSEDEGLDEIYDENDEENDHDHEPEPELVAEKEQSVQKPTAEIEVVVPKDNDKQL
                     SKKELKKKELAELDAVLAELGLAENGGQQDKHVGAQEKSDSRNGELEKKDKSVPAGES
                     KNAKKKKKKDKSSKDTKEQQVLNVPETENSASEAATGSENAGGSSGIDMKEKLKKVTG
                     AKKKKSNKEMDAAARAAASEAAARSARLAAAKKKEKSHYNQQPVR"
ORIGIN      
        1 tcaattcctg taaaaaaaaa aaaaaaaaaa aaaaaaatcc cccaaatcag ctgatcatct
       61 tccgaaccct aattcaacac atctcccttt aatcatcaaa tccgtttaca cccatctcaa
      121 ttatcaaatt ttctcgtaac cctaattctt ttctgaaatc atctcataaa aaaaaaccta
      181 attcatcgtc aatttgggga tttaggaaaa aagattaaat catctaattt catcattcca
      241 gataaccgat tataataatc aatccaaact tgaaacgttt actactacat cgtgtttaag
      301 cagattactt tttaaaaatc gtcatcaaat cttattgcac atataatctc aatcttgagc
      361 agttgaagaa aaaatggctg gtggtgggat taagaaggat gattcaatag caattaacag
      421 cactaatgtt tttgctgcac tcggaagctt aaaaaagaag aagaaatcgg ataaagattc
      481 gaaaaagggg agtgtttcaa agactaaaaa ggagagtaag aaggagccgg agccggtgtt
      541 ttgggctccg gcgccgttaa cggttaagtc atgggcggat gttgatgatg aagatgatga
      601 tgactattat gctaccacag ctccgcctcc ggtttggggt ggtggtgccg gaatgcacca
      661 ggagaaagtt actccagttg aggagagcgg aagtgaagat gaaggtcttg atgaaattta
      721 tgatgagaat gatgaggaga atgatcatga tcatgaacct gaacctgaat tggtcgctga
      781 aaaagaacag tctgttcaga agcctactgc tgaaatcgag gtggtcgtgc ccaaggacaa
      841 tgacaaacag ctctccaaaa aggaattgaa gaagaaagaa cttgccgaac ttgatgcagt
      901 gcttgcagaa cttggtcttg ctgaaaacgg tggccaacag gataaacatg ttggggcaca
      961 agagaagtcc gacagtcgaa acggagagtt ggaaaagaaa gacaaaagtg tgccagctgg
     1021 cgagagcaag aatgctaaaa agaagaagaa gaaggacaag tcttccaagg ataccaaaga
     1081 acaacaggtt ttaaacgttc ccgaaaccga gaattcagca tcagaagctg ctactggatc
     1141 cgaaaatgct ggaggttcat ctggaattga tatgaaagag aagttaaaga aggtgactgg
     1201 tgctaaaaag aaaaaatcta acaaggaaat ggatgctgcc gccagagctg ccgctagtga
     1261 ggcggcggca aggagtgcaa ggcttgcagc tgccaagaag aaggagaaga gccactacaa
     1321 ccagcagcct gtgcgttaag gtgttttttt attttattta ttttcataat aaacttcagt
     1381 atcttggttt cattttgaga tgaccttttt tttttttttt tttacatgga aatattttca
     1441 gttttacttt gaaaagtaag tactagaaag ttaagatttt taccgtactt tattattagt
     1501 agtttttggt gtagagagta gaaacacccg tggatgtttt actatatctt gaattttggt
     1561 ttatgaatgg aactttttat ct
//
LOCUS       XM_071886200            1487 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904254), transcript variant X2, mRNA.
ACCESSION   XM_071886200
VERSION     XM_071886200.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1487
                     /gene="LOC139904254"
                     /note="uncharacterized LOC139904254; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904254"
     CDS             374..1339
                     /gene="LOC139904254"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742301.1"
                     /db_xref="GeneID:139904254"
                     /translation="MAGGGIKKDDSIAINSTNVFAALGSLKKKKKSDKDSKKGSVSKT
                     KKESKKEPEPVFWAPAPLTVKSWADVDDEDDDDYYATTAPPPVWGGGAGMHQEKVTPV
                     EESGSEDEGLDEIYDENDEENDHDHEPEPELVAEKEQSVQKPTAEIEVVVPKDNDKQL
                     SKKELKKKELAELDAVLAELGLAENGGQQDKHVGAQEKSDSRNGELEKKDKSVPAGES
                     KNAKKKKKKDKSSKDTKEQQVLNVPETENSASEAATGSENAGGSSGIDMKEKLKKVTG
                     AKKKKSNKEMDAAARAAASEAAARSARLAAAKKKEKSHYNQQPVR"
ORIGIN      
        1 tcaattcctg taaaaaaaaa aaaaaaaaaa aaaaaaatcc cccaaatcag ctgatcatct
       61 tccgaaccct aattcaacac atctcccttt aatcatcaaa tccgtttaca cccatctcaa
      121 ttatcaaatt ttctcgtaac cctaattctt ttctgaaatc atctcataaa aaaaaaccta
      181 attcatcgtc aatttgggga tttaggaaaa aagattaaat catctaattt catcattcca
      241 gataaccgat tataataatc aatccaaact tgaaacgttt actactacat cgtgtttaag
      301 cagattactt tttaaaaatc gtcatcaaat cttattgcac atataatctc aatcttgagc
      361 agttgaagaa aaaatggctg gtggtgggat taagaaggat gattcaatag caattaacag
      421 cactaatgtt tttgctgcac tcggaagctt aaaaaagaag aagaaatcgg ataaagattc
      481 gaaaaagggg agtgtttcaa agactaaaaa ggagagtaag aaggagccgg agccggtgtt
      541 ttgggctccg gcgccgttaa cggttaagtc atgggcggat gttgatgatg aagatgatga
      601 tgactattat gctaccacag ctccgcctcc ggtttggggt ggtggtgccg gaatgcacca
      661 ggagaaagtt actccagttg aggagagcgg aagtgaagat gaaggtcttg atgaaattta
      721 tgatgagaat gatgaggaga atgatcatga tcatgaacct gaacctgaat tggtcgctga
      781 aaaagaacag tctgttcaga agcctactgc tgaaatcgag gtggtcgtgc ccaaggacaa
      841 tgacaaacag ctctccaaaa aggaattgaa gaagaaagaa cttgccgaac ttgatgcagt
      901 gcttgcagaa cttggtcttg ctgaaaacgg tggccaacag gataaacatg ttggggcaca
      961 agagaagtcc gacagtcgaa acggagagtt ggaaaagaaa gacaaaagtg tgccagctgg
     1021 cgagagcaag aatgctaaaa agaagaagaa gaaggacaag tcttccaagg ataccaaaga
     1081 acaacaggtt ttaaacgttc ccgaaaccga gaattcagca tcagaagctg ctactggatc
     1141 cgaaaatgct ggaggttcat ctggaattga tatgaaagag aagttaaaga aggtgactgg
     1201 tgctaaaaag aaaaaatcta acaaggaaat ggatgctgcc gccagagctg ccgctagtga
     1261 ggcggcggca aggagtgcaa ggcttgcagc tgccaagaag aaggagaaga gccactacaa
     1321 ccagcagcct gtgcgttaag gtttgttaac ttctggtgcc ctcgaaattc ttggtttgag
     1381 aatatttaaa gaaggttgca cgaacgcagc ttctgtaaca agaagaaaga gtagttaatg
     1441 gtggtggtgg tggtgtgtgt gttgccactt gttggtgata tgaaccc
//
LOCUS       XM_071886201            1496 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides syntaxin-32-like
            (LOC139904255), mRNA.
ACCESSION   XM_071886201
VERSION     XM_071886201.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1496
                     /gene="LOC139904255"
                     /note="syntaxin-32-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139904255"
     CDS             257..1273
                     /gene="LOC139904255"
                     /codon_start=1
                     /product="syntaxin-32-like"
                     /protein_id="XP_071742302.1"
                     /db_xref="GeneID:139904255"
                     /translation="MNMKLAQGSSYRDRTNEFSSITERLRKSLPSVNGVVTATNGGVR
                     VSKAAFQTKFNERASNIGYRIHHTSQKLAKLAKLAKRTSVFDDPTVEIQELTAVIKQD
                     ITALNADVVDLQVVCNSQNESENISSDTTTHSATVVDNLKNRLMGATKEFKEVLTMRT
                     ENLKVHENRRQLFSASNSKEAANPFARQRPLANKSSANAITAPPPWVNNTSTSSHLFP
                     TKQADGESQPLLHQQQNQQQQQMVPLQDTYMQSRAEALHNVESTIHELGTIFTQLATM
                     VSQQGELAIRIDENMEDTLANVEGAQGQLMRYLNGISSNRWLMIKIFFVLIVFLMIFL
                     FFVA"
     misc_feature    533..1267
                     /gene="LOC139904255"
                     /note="t-SNARE complex subunit, syntaxin [Intracellular
                     trafficking, secretion, and vesicular transport]; Region:
                     COG5074"
                     /db_xref="CDD:227406"
     misc_feature    1001..1255
                     /gene="LOC139904255"
                     /note="SNARE motif of syntaxin 5; Region: SNARE_syntaxin5;
                     cd15844"
                     /db_xref="CDD:277197"
     misc_feature    order(1004..1006,1010..1015,1019..1036,1040..1048,
                     1052..1057,1061..1069,1073..1078,1082..1090,1094..1099,
                     1103..1120,1124..1141,1145..1162,1166..1174)
                     /gene="LOC139904255"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277197"
     misc_feature    1094..1096
                     /gene="LOC139904255"
                     /note="zero layer; other site"
                     /db_xref="CDD:277197"
ORIGIN      
        1 acagatcaat ttattagaga tctgaacttt tttttttata agaaatataa aaataaaatt
       61 cagatcattc tagggttttt aattcaattc aattcaatta acagtcaaac atcacaatca
      121 gcgaatttca tatatactaa ttatagctat ttccaattct ccctgaaatc actcacctag
      181 aatcaaatcc cccttttatt cgaaccaata catatacata cagacattat tatacatcaa
      241 tcaacaatta tatacgatga atatgaaatt ggcgcaaggt tcgtcgtata gagatcgaac
      301 aaatgaattt tctagcataa ctgaaaggct acggaaatcg ttaccgtcgg ttaacggtgt
      361 ggtgacggcg actaacggtg gagttagggt ttcgaaagct gcgtttcaga ctaaattcaa
      421 tgaaagagct tcaaatattg gatatagaat tcatcatacg tcacagaagc tagctaaact
      481 tgcaaaattg gcaaaaagga catctgtttt tgacgatcca acagtggaga ttcaagaatt
      541 gacagctgtc atcaagcagg acattactgc tcttaatgca gatgtagtgg atttgcaggt
      601 tgtttgcaat tcacagaatg aaagtgaaaa tatctccagt gacacaacta cacactcagc
      661 tacagttgtt gataatctga agaatcgcct gatgggggcc acaaaggagt tcaaggaagt
      721 ccttactatg agaacagaga acttgaaggt tcatgaaaat aggagacagc tgttttctgc
      781 aagtaattcg aaagaggctg ccaatccatt tgcccgacaa cgccccttag ctaacaagtc
      841 atcagctaat gctataactg cacctcctcc atgggttaac aacacctcaa cttcatctca
      901 tctattcccc acgaagcagg cagatggaga atctcaacca ttattacacc agcaacaaaa
      961 tcaacagcaa caacaaatgg taccattaca agatacttac atgcagagcc gagctgaggc
     1021 tcttcacaac gttgagtcaa ccattcatga gttgggcacg attttcacac aattggcaac
     1081 catggtttct caacaaggag agcttgcaat aaggatcgat gagaacatgg aagatacact
     1141 tgcaaatgta gaaggggcac aaggacaact aatgaggtac ctcaatggta tctcatccaa
     1201 ccggtggctt atgataaaaa tattctttgt actaatcgta ttcctaatga tcttcctatt
     1261 tttcgtggcc taataatatg tgaattttga tctaaacgat ttctagttca gagcacatac
     1321 ttgcaaagtc attgtcgacg tctcagacag ttattgttaa ttgcacctta ctcattgata
     1381 gttgtaaact atagtccaac aatagataaa tgtctggtgc agtggtgcat atgattttac
     1441 tgtaactgtt tgggtttacc caaaaagtat gagtgtttta ggcatctaat actttt
//
LOCUS       XR_011778714             417 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904256), ncRNA.
ACCESSION   XR_011778714
VERSION     XR_011778714.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139904256"
                     /note="uncharacterized LOC139904256; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904256"
     ncRNA           1..417
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904256"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904256"
ORIGIN      
        1 ttcacaagcg aaaaactgag ctttgtttgc tcctcattga gaagagattg ttgccacttc
       61 gtcctggagt tgattgatcc gccttctgct aaaggtgtga aagtttccat gtgcagcact
      121 tctaacgaaa aggcggtgtc tgctagagtc tcatttcttt tgggacctga aagagctgca
      181 agaattcaaa tttttgcaga tgtcgtttat gaaccagaat agctattaga aaaactgtaa
      241 gttgtggata agtgctacca agtggtctcc gataaagcaa gctacagcag atttgatctc
      301 aacagaagat tttactggga tgatgttaat atagataatt aatccgagtg ttgaacaaat
      361 aaattttcag ctatcaattt attttgtatt ttttcacttg ataaatgata tttgaaa
//
LOCUS       XR_011778715             937 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904257), ncRNA.
ACCESSION   XR_011778715
VERSION     XR_011778715.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..937
                     /gene="LOC139904257"
                     /note="uncharacterized LOC139904257; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904257"
     ncRNA           1..937
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904257"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904257"
ORIGIN      
        1 ttaatctagt actacatagt ataaatgact tatttattac ttagatagtt agatgtgtat
       61 gatgctggac aaagcggtta cactattagg taaagcttaa tcatcggata actttaagaa
      121 tccagagaag aaaacatgtt tatatttgtg atgttttgtt attctaatgt aataggcatc
      181 atttcttcct taatgttttg aataagtaat ttggttcatt actcgtttat attgctagat
      241 atttctactt gataactaca tcgctattta aagaaactca ctcgtgagga ttgtgttgtg
      301 caaatgagtt gtagtaagaa agctaattat tgagatttac cgaattggtt aggcaaatgt
      361 gtatctaatt atccaatttt ggtcctaata tttgcatggg tatgctgcat caacaacatt
      421 aaaaacatct aactactcta aattagcttt cgtaggttgt attaatctgg tgaatgtttg
      481 tctgatgtag attaaggggc tgtttacttt ttttcccatt aagttctata cgaatataga
      541 tggcaatatg aggattactg gaattaaaat taacggtgat gatttggtgt ttgaggttgg
      601 gatggtgact gctaaatatc cttctaagaa ttttgatgtt agtcctcaat gtgaaggcaa
      661 aaaacactct tcttcttgaa aggcccttct gttgaatgct gcttcaatgg attaaattat
      721 gttatcaaat attctatcat aatatgctat gtaggaagca tccaacaatg tccaatcagc
      781 agttaagtta ttctgtactt taagttaaaa acaatgtttt atgtctactc tgtttgttgg
      841 gtcaatagta attagtaaag atataaatgt atgtgtacct gagacatatt ggtttttagt
      901 gccaaactgc taatcgttat ttgtaatttg tattgaa
//
LOCUS       XM_071886202             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904258), mRNA.
ACCESSION   XM_071886202
VERSION     XM_071886202.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139904258"
                     /note="uncharacterized LOC139904258; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904258"
     CDS             65..541
                     /gene="LOC139904258"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742303.1"
                     /db_xref="GeneID:139904258"
                     /translation="MSSSIFFISTLIIALFITISSSNPNPNSLPLTPLTTAHSVLSHH
                     GFPVGLLPTDVRSYNLNRTSGEFSVDLGTPCKLILPPDNYLATYSKKVTGKIGENRIA
                     ELNGIRVRAFFQWWGITGIKINGDDLVFEVGMVTAKYPSKNFDVSPQCEGKKHSSS"
     misc_feature    176..496
                     /gene="LOC139904258"
                     /note="Protein of unknown function, DUF538; Region:
                     DUF538; pfam04398"
                     /db_xref="CDD:461290"
ORIGIN      
        1 tttctctcca aaaatcacat ctaccgatca gaaaaaaaaa aaaaaaaaaa aacacacaaa
       61 aaccatgtct tcatccatct tctttatctc caccctaatt atcgccttgt ttatcaccat
      121 ctcatcatca aaccctaacc ctaattcact accgttgaca ccattaacaa cggcacactc
      181 tgtacttagt caccacggct tccccgtcgg actacttccc acagacgtcc gttcatataa
      241 cctgaaccgt acttccggcg agttttccgt cgatctcgga actccttgca agcttatctt
      301 accacctgat aattacttag ctacgtattc gaagaaagtt actggtaaga tcggggagaa
      361 tcgaattgcg gagcttaatg gaattagggt tagggctttt tttcagtggt gggggattac
      421 tggaattaaa attaacggtg atgatttggt gtttgaggtt gggatggtga ctgctaaata
      481 tccttctaag aattttgatg ttagtcctca atgtgaaggc aaaaaacact cttcttcttg
      541 aaaggtattt tatataaata cattcatata tttatg
//
LOCUS       XM_071886203            2166 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904259), transcript variant X1, mRNA.
ACCESSION   XM_071886203
VERSION     XM_071886203.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2166
                     /gene="LOC139904259"
                     /note="uncharacterized LOC139904259; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139904259"
     CDS             315..1529
                     /gene="LOC139904259"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742304.1"
                     /db_xref="GeneID:139904259"
                     /translation="MTTAKLEAGNLDATSDNSNRYAKILDGPWWAQFRYGSNPWMARY
                     VYSVMFLLANLLAWAVRDYGQATLSGMHKFKNCNGGKDCLGSEGVLRVSLGCFIFYVI
                     MLFSTSGTSKLHGRKELWHSGWWSAKIFLMISLIVLSFCLPKHLILIYGDLAHFGAGI
                     FLLIQLISIISFITWLNDCCLLQKYAEKCHIHFTLLATTAYIVCIFGITLMYIWYTPQ
                     LTCVLNIFFITWTLVLILLMTIVSLHPKISAGFLTPGFMGLYVVFLCWSAIRSEPPDK
                     KCLRNSEGSRDWLTLISFIVALLAMVIATFSTGIDSKCFQFRKDEKQDEDDVPYSFVF
                     FHLVFATGTMYFAMLLIGWSSNHPMKKWTIDVGWTSTWVRIINEWLAVCVYLWMLVAP
                     IVWKTRQVENPV"
     misc_feature    420..1508
                     /gene="LOC139904259"
                     /note="Serine incorporator (Serinc); Region: Serinc;
                     pfam03348"
                     /db_xref="CDD:460891"
ORIGIN      
        1 ttttaaaata tagagataga gaaacacata aaagcaaaag aaaaaaaaaa attcgcatcg
       61 actatttcaa aaggaattca tctctggtcg ctcgactgct cgttgatcac gctttttgct
      121 cctcaactaa cttaattcat cttttatctt tcaccggtaa cttcatataa tcgttcgccg
      181 gagactttag aactaccttc tcgaacaaac aatcaacctc aatttccgtc tcgttttcag
      241 cgcagattgc agatgagaag agagctttag tggattaaat ccactagctc tttctggata
      301 attgatcata acaaatgact actgcgaaac ttgaagctgg gaatttggat gcaacaagtg
      361 ataacagcaa ccgttacgcc aagatcttag atgggccttg gtgggcccaa tttcgttatg
      421 ggtccaaccc ttggatggct agatatgtgt atagtgtgat gtttctatta gcaaacttgc
      481 ttgcttgggc cgtacgcgat tatggccaag ccacattgtc cggaatgcat aaattcaaaa
      541 actgtaacgg tggtaaagac tgtttaggtt cggaaggagt actaagagtg agcttgggat
      601 gttttatatt ctatgtcata atgttatttt caaccagtgg tacctcaaag ttgcacgggc
      661 gtaaagaatt atggcattct ggttggtggt ctgccaagat ctttctcatg atctcactaa
      721 tcgtcctatc attctgtctt cctaaacatc ttattcttat atacggggat cttgcacatt
      781 ttggcgcagg gatctttctg ctaattcagt taatcagcat aatcagcttc attacatggc
      841 taaatgattg ttgtttatta caaaaatatg cagagaaatg ccatatccat ttcacgcttc
      901 ttgcaactac tgcatatatc gtgtgcatat ttgggatcac tttgatgtac atttggtaca
      961 cgccacaatt aacttgcgtg cttaacattt tctttatcac atggacgctt gtactcatac
     1021 tacttatgac tattgtctct cttcacccaa aaattagcgc tggattcttg actccaggtt
     1081 ttatggggtt gtacgtcgtg ttcctatgct ggtccgctat tagaagtgaa ccaccagata
     1141 aaaaatgtct gaggaactct gaaggctcaa gggactggct aactctcata agctttattg
     1201 ttgcgttgct tgcaatggtg attgccacat tttcaacagg catcgattct aaatgttttc
     1261 agtttcgaaa ggatgagaaa caggatgaag atgatgttcc ttatagtttt gtattctttc
     1321 atcttgtttt tgcaactgga actatgtact ttgcaatgct actaattggt tggagttcta
     1381 atcaccccat gaaaaagtgg acgattgatg tcggttggac tagtacttgg gtcagaatta
     1441 tcaatgagtg gctagcagtc tgtgtctact tgtggatgct agtggcccca atcgtgtgga
     1501 aaaccagaca ggtggagaac cccgtataag caaactttta gaagacgata tcttcttctt
     1561 caagattggt gcgcgatcag ccaaggtgga ctcagaagta aacatcttga tcttcatcat
     1621 gtatatgtta acacaatgta tacaaaatca aatgatatac aagggtgcag agaggttgat
     1681 atatacaggc taaaatgttc ctcctgcaca acatctacgg cgtctaatgt gatgtggttg
     1741 ctttcatatc tattctactc tttaacttta tgaaaaatag tgggaaaaag caagcatgaa
     1801 atatgatgac aattgttgga gctaacatat tatggatgat tcaagagatt tttgggaaag
     1861 atgataaaag atataaaatt caagatagat tcaatattga taccgttgaa acattgtatt
     1921 tgagaaccgg caaaactcaa agatatttaa attactgaag aagttcaaag cgatcttcaa
     1981 attatttgac taaatgagtg aagcaaaaga aaattggaga atcggaaatg ataacattta
     2041 ggtccgttta ataaaaagtg ttacttgttt taaaattcgt atgattagaa aaatttgatt
     2101 aaactttgtc tctagtgata ataaactgtt taataattat tataaatgaa ctttgattta
     2161 aactag
//
LOCUS       XM_071886204            2160 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904259), transcript variant X2, mRNA.
ACCESSION   XM_071886204
VERSION     XM_071886204.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2160
                     /gene="LOC139904259"
                     /note="uncharacterized LOC139904259; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139904259"
     CDS             308..1522
                     /gene="LOC139904259"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742305.1"
                     /db_xref="GeneID:139904259"
                     /translation="MTTAKLEAGNLDATSDNSNRYAKILDGPWWAQFRYGSNPWMARY
                     VYSVMFLLANLLAWAVRDYGQATLSGMHKFKNCNGGKDCLGSEGVLRVSLGCFIFYVI
                     MLFSTSGTSKLHGRKELWHSGWWSAKIFLMISLIVLSFCLPKHLILIYGDLAHFGAGI
                     FLLIQLISIISFITWLNDCCLLQKYAEKCHIHFTLLATTAYIVCIFGITLMYIWYTPQ
                     LTCVLNIFFITWTLVLILLMTIVSLHPKISAGFLTPGFMGLYVVFLCWSAIRSEPPDK
                     KCLRNSEGSRDWLTLISFIVALLAMVIATFSTGIDSKCFQFRKDEKQDEDDVPYSFVF
                     FHLVFATGTMYFAMLLIGWSSNHPMKKWTIDVGWTSTWVRIINEWLAVCVYLWMLVAP
                     IVWKTRQVENPV"
     misc_feature    413..1501
                     /gene="LOC139904259"
                     /note="Serine incorporator (Serinc); Region: Serinc;
                     pfam03348"
                     /db_xref="CDD:460891"
ORIGIN      
        1 ttttaaaata tagagataga gaaacacata aaagcaaaag aaaaaaaaaa attcgcatcg
       61 actatttcaa aaggaattca tctctggtcg ctcgactgct cgttgatcac gctttttgct
      121 cctcaactaa cttaattcat cttttatctt tcaccggtaa cttcatataa tcgttcgccg
      181 gagactttag aactaccttc tcgaacaaac aatcaacctc aatttccgtc tcgttttcag
      241 cgcagatgag aagagagctt tagtggatta aatccactag ctctttctgg ataattgatc
      301 ataacaaatg actactgcga aacttgaagc tgggaatttg gatgcaacaa gtgataacag
      361 caaccgttac gccaagatct tagatgggcc ttggtgggcc caatttcgtt atgggtccaa
      421 cccttggatg gctagatatg tgtatagtgt gatgtttcta ttagcaaact tgcttgcttg
      481 ggccgtacgc gattatggcc aagccacatt gtccggaatg cataaattca aaaactgtaa
      541 cggtggtaaa gactgtttag gttcggaagg agtactaaga gtgagcttgg gatgttttat
      601 attctatgtc ataatgttat tttcaaccag tggtacctca aagttgcacg ggcgtaaaga
      661 attatggcat tctggttggt ggtctgccaa gatctttctc atgatctcac taatcgtcct
      721 atcattctgt cttcctaaac atcttattct tatatacggg gatcttgcac attttggcgc
      781 agggatcttt ctgctaattc agttaatcag cataatcagc ttcattacat ggctaaatga
      841 ttgttgttta ttacaaaaat atgcagagaa atgccatatc catttcacgc ttcttgcaac
      901 tactgcatat atcgtgtgca tatttgggat cactttgatg tacatttggt acacgccaca
      961 attaacttgc gtgcttaaca ttttctttat cacatggacg cttgtactca tactacttat
     1021 gactattgtc tctcttcacc caaaaattag cgctggattc ttgactccag gttttatggg
     1081 gttgtacgtc gtgttcctat gctggtccgc tattagaagt gaaccaccag ataaaaaatg
     1141 tctgaggaac tctgaaggct caagggactg gctaactctc ataagcttta ttgttgcgtt
     1201 gcttgcaatg gtgattgcca cattttcaac aggcatcgat tctaaatgtt ttcagtttcg
     1261 aaaggatgag aaacaggatg aagatgatgt tccttatagt tttgtattct ttcatcttgt
     1321 ttttgcaact ggaactatgt actttgcaat gctactaatt ggttggagtt ctaatcaccc
     1381 catgaaaaag tggacgattg atgtcggttg gactagtact tgggtcagaa ttatcaatga
     1441 gtggctagca gtctgtgtct acttgtggat gctagtggcc ccaatcgtgt ggaaaaccag
     1501 acaggtggag aaccccgtat aagcaaactt ttagaagacg atatcttctt cttcaagatt
     1561 ggtgcgcgat cagccaaggt ggactcagaa gtaaacatct tgatcttcat catgtatatg
     1621 ttaacacaat gtatacaaaa tcaaatgata tacaagggtg cagagaggtt gatatataca
     1681 ggctaaaatg ttcctcctgc acaacatcta cggcgtctaa tgtgatgtgg ttgctttcat
     1741 atctattcta ctctttaact ttatgaaaaa tagtgggaaa aagcaagcat gaaatatgat
     1801 gacaattgtt ggagctaaca tattatggat gattcaagag atttttggga aagatgataa
     1861 aagatataaa attcaagata gattcaatat tgataccgtt gaaacattgt atttgagaac
     1921 cggcaaaact caaagatatt taaattactg aagaagttca aagcgatctt caaattattt
     1981 gactaaatga gtgaagcaaa agaaaattgg agaatcggaa atgataacat ttaggtccgt
     2041 ttaataaaaa gtgttacttg ttttaaaatt cgtatgatta gaaaaatttg attaaacttt
     2101 gtctctagtg ataataaact gtttaataat tattataaat gaactttgat ttaaactagt
//
LOCUS       XM_071886205            2025 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904259), transcript variant X3, mRNA.
ACCESSION   XM_071886205
VERSION     XM_071886205.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2025
                     /gene="LOC139904259"
                     /note="uncharacterized LOC139904259; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139904259"
     CDS             173..1387
                     /gene="LOC139904259"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742306.1"
                     /db_xref="GeneID:139904259"
                     /translation="MTTAKLEAGNLDATSDNSNRYAKILDGPWWAQFRYGSNPWMARY
                     VYSVMFLLANLLAWAVRDYGQATLSGMHKFKNCNGGKDCLGSEGVLRVSLGCFIFYVI
                     MLFSTSGTSKLHGRKELWHSGWWSAKIFLMISLIVLSFCLPKHLILIYGDLAHFGAGI
                     FLLIQLISIISFITWLNDCCLLQKYAEKCHIHFTLLATTAYIVCIFGITLMYIWYTPQ
                     LTCVLNIFFITWTLVLILLMTIVSLHPKISAGFLTPGFMGLYVVFLCWSAIRSEPPDK
                     KCLRNSEGSRDWLTLISFIVALLAMVIATFSTGIDSKCFQFRKDEKQDEDDVPYSFVF
                     FHLVFATGTMYFAMLLIGWSSNHPMKKWTIDVGWTSTWVRIINEWLAVCVYLWMLVAP
                     IVWKTRQVENPV"
     misc_feature    278..1366
                     /gene="LOC139904259"
                     /note="Serine incorporator (Serinc); Region: Serinc;
                     pfam03348"
                     /db_xref="CDD:460891"
ORIGIN      
        1 taacacgtga tgctcaagaa gttacaacta tataccctct ttttttccaa agttgatatt
       61 gacatctcac aagattgtaa gctagggtgg tgattatggt aataaataag atgagaagag
      121 agctttagtg gattaaatcc actagctctt tctggataat tgatcataac aaatgactac
      181 tgcgaaactt gaagctggga atttggatgc aacaagtgat aacagcaacc gttacgccaa
      241 gatcttagat gggccttggt gggcccaatt tcgttatggg tccaaccctt ggatggctag
      301 atatgtgtat agtgtgatgt ttctattagc aaacttgctt gcttgggccg tacgcgatta
      361 tggccaagcc acattgtccg gaatgcataa attcaaaaac tgtaacggtg gtaaagactg
      421 tttaggttcg gaaggagtac taagagtgag cttgggatgt tttatattct atgtcataat
      481 gttattttca accagtggta cctcaaagtt gcacgggcgt aaagaattat ggcattctgg
      541 ttggtggtct gccaagatct ttctcatgat ctcactaatc gtcctatcat tctgtcttcc
      601 taaacatctt attcttatat acggggatct tgcacatttt ggcgcaggga tctttctgct
      661 aattcagtta atcagcataa tcagcttcat tacatggcta aatgattgtt gtttattaca
      721 aaaatatgca gagaaatgcc atatccattt cacgcttctt gcaactactg catatatcgt
      781 gtgcatattt gggatcactt tgatgtacat ttggtacacg ccacaattaa cttgcgtgct
      841 taacattttc tttatcacat ggacgcttgt actcatacta cttatgacta ttgtctctct
      901 tcacccaaaa attagcgctg gattcttgac tccaggtttt atggggttgt acgtcgtgtt
      961 cctatgctgg tccgctatta gaagtgaacc accagataaa aaatgtctga ggaactctga
     1021 aggctcaagg gactggctaa ctctcataag ctttattgtt gcgttgcttg caatggtgat
     1081 tgccacattt tcaacaggca tcgattctaa atgttttcag tttcgaaagg atgagaaaca
     1141 ggatgaagat gatgttcctt atagttttgt attctttcat cttgtttttg caactggaac
     1201 tatgtacttt gcaatgctac taattggttg gagttctaat caccccatga aaaagtggac
     1261 gattgatgtc ggttggacta gtacttgggt cagaattatc aatgagtggc tagcagtctg
     1321 tgtctacttg tggatgctag tggccccaat cgtgtggaaa accagacagg tggagaaccc
     1381 cgtataagca aacttttaga agacgatatc ttcttcttca agattggtgc gcgatcagcc
     1441 aaggtggact cagaagtaaa catcttgatc ttcatcatgt atatgttaac acaatgtata
     1501 caaaatcaaa tgatatacaa gggtgcagag aggttgatat atacaggcta aaatgttcct
     1561 cctgcacaac atctacggcg tctaatgtga tgtggttgct ttcatatcta ttctactctt
     1621 taactttatg aaaaatagtg ggaaaaagca agcatgaaat atgatgacaa ttgttggagc
     1681 taacatatta tggatgattc aagagatttt tgggaaagat gataaaagat ataaaattca
     1741 agatagattc aatattgata ccgttgaaac attgtatttg agaaccggca aaactcaaag
     1801 atatttaaat tactgaagaa gttcaaagcg atcttcaaat tatttgacta aatgagtgaa
     1861 gcaaaagaaa attggagaat cggaaatgat aacatttagg tccgtttaat aaaaagtgtt
     1921 acttgtttta aaattcgtat gattagaaaa atttgattaa actttgtctc tagtgataat
     1981 aaactgttta ataattatta taaatgaact ttgatttaaa ctagt
//
LOCUS       XR_011778716            1015 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904260), ncRNA.
ACCESSION   XR_011778716
VERSION     XR_011778716.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1015
                     /gene="LOC139904260"
                     /note="uncharacterized LOC139904260; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904260"
     ncRNA           1..1015
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904260"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904260"
ORIGIN      
        1 tggtggacaa catgacttaa aaaggcagag aatggttttt gttggtgagt gttctactct
       61 gatagcaagt atcggtgtat caaaagtttc tctgttcggt tctatttcgg agaggcaact
      121 tcagaggtgt agctatttga gggattgtaa tcgtttaaac cagttgcttc acggtggtta
      181 ctctaatgtt gtttatcagt atgattcaac ggggattgca acgggaacaa ctagtggtgt
      241 tgttaatgat ggacagtcag ttggatctaa caagttgaat cacgatggta gtcttcccag
      301 gtttctataa ctatatttca catgaagttt gccaactatt tgaaggaaga gcaaccattt
      361 ggctatgtca aaggaggtac gagctcaaaa attccccctt gccaacgccc gcgatcaaca
      421 aagagcacaa acacacaacc gcaacaacca gttgtagctc ttaaagacaa ctgttccaag
      481 atgatgacat gcaggaaaca tacacaaaga aaaagcgtga ctaaacaaca ctgttgtaca
      541 ctcttttgaa gactagaacg tgcttgaagt caccaagatt ttgaaaaaac actgatgtta
      601 gtaaactttt gacttagcta ctaggcaccc atgtcattga tgctcttttg atgtaaccac
      661 taaggaataa ccatgcaact aacgttgcta ctaaacatca atattaaaca tgtacctaat
      721 atgcttttga tgtaaccact aggtaggcat gccaataatt atgtaaacaa ctgtatatcc
      781 actgcaaatg aaccacgtaa aagataaact tgcggcgaag tgtgggcacg aaaaactcat
      841 ctatcaatca acaaaaatgt acagttaaag tataattggt cactagataa taagctgaaa
      901 ggaagttgac ttgagagaac aatgtcgatg ttttcatatc aattaatcag tatgacactg
      961 aaaatgtcta ttattgaatg tgaaagttat tgcattacca tagggaacga ttatt
//
LOCUS       XR_011778717             893 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904261), ncRNA.
ACCESSION   XR_011778717
VERSION     XR_011778717.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..893
                     /gene="LOC139904261"
                     /note="uncharacterized LOC139904261; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904261"
     ncRNA           1..893
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904261"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904261"
ORIGIN      
        1 ttcctaaact tcaacttatt ggaaaaaccg tggcattgat ggaagcttag tggggcacga
       61 ctttctatat cattttattt gagttttctc caaccttctt cagccatcct tttctctata
      121 ttctcttgca atccaaccaa cctttctcaa ttatccttca atttcataaa tagattcaat
      181 agacttcttt ttgggcggtg tggttcgtta gcatcgactg aatgtataat ccaaaaagta
      241 aggtttttcc ttcattgggt agaattgatt gaatatctgt gtgaaaatta gggtttgaga
      301 cagttaaaca caaattgtta ccgtcgtcgt tgtaattgtt atcaacgatg gccctgctat
      361 ccccgtcgtt ccaatcagtt caaggcaggt ggaatttgcg ttggtgcttt ttagtcatct
      421 gtccaaacat gattaaatgg tctaactaga ctttatcgag atctgggaga atgtaatcgt
      481 gtttgccgat atcaaaagag cgctttattc ggtaataact caccctattc aagacatttt
      541 ctaacaaaca taggataata acacataatg ttacaacata tgacaaagaa ccaaccattc
      601 agaaataaag gaccaaccag atgagaagaa acagtatgca accacttttt gttcaattca
      661 gcccaacaac taaaaggcat tcatctttgg tctactccat gtagccgttt acttaaacta
      721 catgtattgc attagcaaat gcacacatcg tatgatcatg caagttttcc gtatgtaatg
      781 aacgatgaaa ataactcgaa attcgacaaa aacgaatatg cgcagcgaag cgcgtttcgg
      841 accacaatct agtttatagt atttattttg gtaagaaaga tatatgtttt gcg
//
LOCUS       XM_071886206            1961 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable sulfate transporter
            3.5 (LOC139904262), mRNA.
ACCESSION   XM_071886206
VERSION     XM_071886206.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1961
                     /gene="LOC139904262"
                     /note="probable sulfate transporter 3.5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139904262"
     CDS             15..1952
                     /gene="LOC139904262"
                     /codon_start=1
                     /product="probable sulfate transporter 3.5"
                     /protein_id="XP_071742307.1"
                     /db_xref="GeneID:139904262"
                     /translation="MAPAEVVATGETFHKVNFANPRSFTKTFKSDLKETFLPDDPFHD
                     LKGKPLPIKAKKALQYFVPIFEWLPKYTRKLFVYDLLAGITIASLAIPQGISYAKLAN
                     VPPIIGLYSSFVPPLIYSVFGSSKHLAVGTVAASSLIIAATIETKVNPAENPQLYLNL
                     VFTATLISGVTQLILGVFRLGILVDFLSHSTITGFMGGTATLICLQQLKGIFGLKHFT
                     THTDMVSVIRVILKNKKEIRWESTVVGVIFLVFLQFAKFLKQKKPKLFWVSAIAPMFV
                     VASGCVFAYLAHAEKHGIAIVGDLKKGINPSSLKNLDFDPKYISAPIQAGLVTAMIAL
                     AEGIAIGRSFAIMENKQIDGNKEMIAFGLMNIIGSFTSCYLTTGPFSKTAVNYNAGCK
                     SQMANVVMSICMMLTLLFLAPLFSYTPLVALSAIIMSAMLGLIEYDKAYHLYKTDKFD
                     FAICIVAFFGVAFISMDVGLMLSVGLALLRALLYVARPASSKLGNIPDTDLYRDVEQY
                     PGAIGIPKTLILQLGSPIYFANSGYIRERILRWIRDEKANKDFQGDDVEYVILDLGGV
                     TSIDITGVETLVEILRSLEAKEMKVVIVNPRLEVMEKLIVTKFIEKIGKERVFLSIED
                     AIEGCKFSLAQSKDYGGQLRN"
     misc_feature    201..1889
                     /gene="LOC139904262"
                     /note="high affinity sulphate transporter 1; Region: sulP;
                     TIGR00815"
                     /db_xref="CDD:273284"
ORIGIN      
        1 tattcctcat tcaaatggca ccagctgaag tagtagcaac tggagaaaca tttcacaagg
       61 tgaattttgc aaacccgaga agctttacga aaacgttcaa gtccgatttg aaagaaactt
      121 tcttacccga cgatccattt catgatttga aagggaaacc attgcccata aaggctaaaa
      181 aagccttgca atatttcgtt ccaatattcg aatggcttcc taaatataca cgaaaattgt
      241 ttgtgtatga tcttttagcc ggtatcacta ttgctagtct tgcaattcct caaggcatta
      301 gttacgcgaa actcgctaat gttcctccta tcattggttt atattcgagt ttcgttcccc
      361 ctctaatcta ctcagttttc gggagctcaa agcatctagc cgtcggaaca gtagccgcga
      421 gctcgttaat catagctgca accatcgaaa caaaagtgaa cccagccgaa aatccacaac
      481 tctatcttaa tctagtcttc actgctacac tcatttcggg tgtaactcag cttattcttg
      541 gcgtttttcg gttgggaata ttggtagatt tcttgtcaca ttcaacaatt actggcttca
      601 tgggagggac agcaacactt atttgccttc aacaattaaa aggaatattt ggtttgaagc
      661 attttacaac acatactgat atggtatctg ttatacgtgt catcttgaaa aataaaaaag
      721 agataagatg ggaaagcacg gttgtaggtg taatattttt ggtattcctt caatttgcaa
      781 agtttctgaa acaaaagaaa ccaaagttat tttgggtgtc tgcgatagct ccaatgttcg
      841 tggtcgcaag tggatgcgtt tttgcctatc tagctcacgc agagaaacac ggcatcgcaa
      901 ttgtgggtga cttgaaaaag ggaattaatc catcttctct taaaaatttg gactttgatc
      961 caaaatatat atcagcacca attcaagcag gcctcgtaac agccatgatt gctcttgcag
     1021 aaggaatcgc gataggaaga agttttgcaa taatggaaaa taaacagatt gatggtaaca
     1081 aagagatgat agcttttggt ctcatgaaca ttattggatc tttcacttct tgctacttaa
     1141 ccacagggcc attttcaaaa accgcagtga attacaatgc aggatgcaaa tcacaaatgg
     1201 ctaacgtagt aatgtcaata tgtatgatgt taacattact cttcttggca ccacttttta
     1261 gttacactcc tcttgttgca ctttcggcga ttatcatgtc tgcaatgctt ggtctaatcg
     1321 agtatgataa agcttatcat ctatacaaaa ccgacaaatt tgatttcgcc atttgcatag
     1381 tggcgttctt tggcgtcgct tttattagca tggacgttgg cctcatgtta tcggtgggat
     1441 tagcgttgtt gagagcgctt ttgtacgtag ctaggccagc aagttcgaaa cttggtaaca
     1501 taccggacac tgatttatat cgcgatgtag aacaatatcc tggagccatt ggcattccta
     1561 agacactaat tttgcaactt ggttcaccaa tttactttgc taattcgggt tacattagag
     1621 aaaggatttt gagatggatt agagatgaaa aagcgaataa agattttcaa ggagatgatg
     1681 ttgaatatgt tattttggac ttgggaggtg ttacatccat tgatatcacc ggtgtcgaaa
     1741 ctctggttga aattctcaga agtttagaag ccaaggaaat gaaggttgtc atagtaaatc
     1801 caagacttga ggtgatggag aaattaatcg ttactaaatt cattgaaaaa attggaaaag
     1861 aacgtgtgtt tttgtcgatc gaagatgcta tcgagggttg caaattctca ctagcgcaat
     1921 caaaggatta tggtggccag ttgcgtaatt gaagataaaa g
//
LOCUS       XM_071886207            1698 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            phosphoribosylaminoimidazole-succinocarboxamide synthase,
            chloroplastic-like (LOC139904263), transcript variant X1, mRNA.
ACCESSION   XM_071886207
VERSION     XM_071886207.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1698
                     /gene="LOC139904263"
                     /note="phosphoribosylaminoimidazole-succinocarboxamide
                     synthase, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139904263"
     CDS             206..1462
                     /gene="LOC139904263"
                     /codon_start=1
                     /product="phosphoribosylaminoimidazole-succinocarboxamide
                     synthase, chloroplastic-like isoform X1"
                     /protein_id="XP_071742308.1"
                     /db_xref="GeneID:139904263"
                     /translation="MACIPGLNPTKTLGIISPSSPSVSSTNNSLLLWNSAKTSFKFGQ
                     INNQKLTRICSVMATNQHQQQQQDELNMNMNLNLNALTNSDHRDEVINSAKASLSNCL
                     SETNLHLSIPSLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRVLASIPFKGQVLNDT
                     SLWWFNQTQHIASNAIIAVPDKNVTIAKKCSVFPVEFVVRGYGTGSTDTSLWTVYKNG
                     VRNYCGNALPEGMLKNERLPANIITPTTKAADHDVPITPDEIVKQGLMSQADYDEASR
                     KALSLFEYGQRVALQHGLILVDTKYEFGKAPDGSVLLIDEVHTPDSSRYWLAHSYESR
                     FQNGLEPENIDKEFLRLWFKDHCNPYEDKVLPDAPEELVTELAWRYIFLFETITKSRF
                     QIHETMEPIHDRICRNVSKALLSLQN"
     misc_feature    455..1432
                     /gene="LOC139904263"
                     /note="phosphoribosylaminoimidazole-succinocarboxamide
                     synthase; Region: PLN02544"
                     /db_xref="CDD:178159"
     misc_feature    order(563..574,578..580,599..601,635..637,731..733,
                     764..775,779..781,791..793,797..799,803..805,815..823,
                     938..940,944..946,959..961,1097..1105,1109..1111,
                     1148..1150,1166..1177)
                     /gene="LOC139904263"
                     /note="active site"
                     /db_xref="CDD:133469"
     misc_feature    order(563..568,572..574,578..583,599..601,605..607,
                     728..730,767..769,773..775,779..781,944..946,1109..1111,
                     1145..1150)
                     /gene="LOC139904263"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:133469"
     misc_feature    order(635..637,791..793,797..799,803..805,815..823,
                     938..940,959..961,1097..1105,1166..1177)
                     /gene="LOC139904263"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:133469"
ORIGIN      
        1 atagtcaaac cttaaagtac cacacacagc ctcagcccac gattctaatt ccatttttca
       61 tcgcacaata aaagtattga ttgatagatg attgattgat tttttgattg attgattcct
      121 gctttatact ccgtatatca atcgtcactg tttcgtcaac aatagcgtga atttacaaat
      181 taaggagaat tttatttaac aaacaatggc gtgtattcca ggcttaaacc ctaccaaaac
      241 cctaggcatc atctcacctt catcaccatc agtgtcttca accaacaaca gtttactttt
      301 atggaattca gcaaaaacta gtttcaaatt tggccaaatt aataaccaga aattgacgag
      361 gatttgttct gtaatggcaa ccaatcagca tcagcagcag cagcaagatg aattgaatat
      421 gaatatgaat ctgaatttga atgcattaac aaatagtgac cacagagacg aagttattaa
      481 ttctgcaaaa gcttcacttt cgaattgcct ttccgaaacg aatcttcatc ttagtattcc
      541 ttctctcaaa tccaaaacaa gaggaaaggt tagggatatt tacgatggag gagattatct
      601 cgtattagtt acaacggacc gacaaagtgc ttttgatagg gttcttgcat caattccgtt
      661 taaaggccag gttcttaatg atacaagttt atggtggttt aatcaaactc aacatattgc
      721 ctcaaatgcg ataatagcag tccctgataa aaatgttact attgcaaaga aatgctctgt
      781 ttttcccgtc gaatttgttg ttagaggcta tgggactgga agtactgata catcgttatg
      841 gactgtttac aaaaacggag tgcggaatta ctgtggcaat gctcttcctg aaggaatgtt
      901 gaaaaatgag aggctacctg caaatataat tacaccaact actaaagctg cagaccatga
      961 tgttcctatt actcccgatg agattgttaa acaaggcttg atgagtcaag ctgattatga
     1021 tgaagcgagt aggaaagctt taagtttgtt cgagtatggc cagcgtgtgg cattacagca
     1081 tggtttgata ttagtcgata caaagtatga atttggaaag gcccctgatg gttcggtgct
     1141 attgattgat gaggttcata cacccgactc aagcagatac tggttagccc attcttatga
     1201 gtcccggttt cagaatggtc ttgaacccga aaatattgat aaggagtttt tgaggttgtg
     1261 gtttaaagat cactgcaatc cctatgaaga taaggttctc cccgatgctc cagaagagct
     1321 tgttacggaa ctggcttggc gatacatttt cttgttcgag actataacaa aatcaagatt
     1381 tcagatacat gagaccatgg aacctataca tgatagaatt tgccgcaatg tctcaaaggc
     1441 attgctatca ctacagaact agttttaatc cgagcagtta ataatcaatg ttaagtgtca
     1501 ggtgcttttt tctgttacaa aagatcaagc cttaagctat aggcacttgt aaacaacctt
     1561 caacttaaaa tgcagtttcc gttactgaat atgttctgat gacaatggtt gattgttttt
     1621 accatttttg tattggtaac aaggtttata ttttgataaa aggtttattg tttaatgcag
     1681 aacctaaatt tcaatgct
//
LOCUS       XM_071886208            1605 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            phosphoribosylaminoimidazole-succinocarboxamide synthase,
            chloroplastic-like (LOC139904263), transcript variant X2, mRNA.
ACCESSION   XM_071886208
VERSION     XM_071886208.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1605
                     /gene="LOC139904263"
                     /note="phosphoribosylaminoimidazole-succinocarboxamide
                     synthase, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904263"
     CDS             206..1369
                     /gene="LOC139904263"
                     /codon_start=1
                     /product="phosphoribosylaminoimidazole-succinocarboxamide
                     synthase, chloroplastic-like isoform X2"
                     /protein_id="XP_071742309.1"
                     /db_xref="GeneID:139904263"
                     /translation="MACIPGLNPTKTLGIISPSSPSVSSTNNSLLLWNSAKTSFKFGQ
                     INNQKLTRICSVMATNQHQQQQQDELNMNMNLNLNALTNSDHRDEVINSAKASLSNCL
                     SETNLHLSIPSLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRVLASIPFKGQVLNDT
                     SLWWFNQTQHIASNAIIAVPDKNVTIAKKCSVFPVEFVGMLKNERLPANIITPTTKAA
                     DHDVPITPDEIVKQGLMSQADYDEASRKALSLFEYGQRVALQHGLILVDTKYEFGKAP
                     DGSVLLIDEVHTPDSSRYWLAHSYESRFQNGLEPENIDKEFLRLWFKDHCNPYEDKVL
                     PDAPEELVTELAWRYIFLFETITKSRFQIHETMEPIHDRICRNVSKALLSLQN"
     misc_feature    455..1339
                     /gene="LOC139904263"
                     /note="phosphoribosylaminoimidazole-succinocarboxamide
                     synthase; Region: PLN02544"
                     /db_xref="CDD:178159"
     misc_feature    order(563..574,578..580,599..601,635..637,731..733,
                     764..775,779..781,791..793,797..799,845..847,851..853,
                     866..868,1004..1012,1016..1018,1055..1057,1073..1084)
                     /gene="LOC139904263"
                     /note="active site"
                     /db_xref="CDD:133469"
     misc_feature    order(563..568,572..574,578..583,599..601,605..607,
                     728..730,767..769,773..775,779..781,851..853,1016..1018,
                     1052..1057)
                     /gene="LOC139904263"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:133469"
ORIGIN      
        1 atagtcaaac cttaaagtac cacacacagc ctcagcccac gattctaatt ccatttttca
       61 tcgcacaata aaagtattga ttgatagatg attgattgat tttttgattg attgattcct
      121 gctttatact ccgtatatca atcgtcactg tttcgtcaac aatagcgtga atttacaaat
      181 taaggagaat tttatttaac aaacaatggc gtgtattcca ggcttaaacc ctaccaaaac
      241 cctaggcatc atctcacctt catcaccatc agtgtcttca accaacaaca gtttactttt
      301 atggaattca gcaaaaacta gtttcaaatt tggccaaatt aataaccaga aattgacgag
      361 gatttgttct gtaatggcaa ccaatcagca tcagcagcag cagcaagatg aattgaatat
      421 gaatatgaat ctgaatttga atgcattaac aaatagtgac cacagagacg aagttattaa
      481 ttctgcaaaa gcttcacttt cgaattgcct ttccgaaacg aatcttcatc ttagtattcc
      541 ttctctcaaa tccaaaacaa gaggaaaggt tagggatatt tacgatggag gagattatct
      601 cgtattagtt acaacggacc gacaaagtgc ttttgatagg gttcttgcat caattccgtt
      661 taaaggccag gttcttaatg atacaagttt atggtggttt aatcaaactc aacatattgc
      721 ctcaaatgcg ataatagcag tccctgataa aaatgttact attgcaaaga aatgctctgt
      781 ttttcccgtc gaatttgttg gaatgttgaa aaatgagagg ctacctgcaa atataattac
      841 accaactact aaagctgcag accatgatgt tcctattact cccgatgaga ttgttaaaca
      901 aggcttgatg agtcaagctg attatgatga agcgagtagg aaagctttaa gtttgttcga
      961 gtatggccag cgtgtggcat tacagcatgg tttgatatta gtcgatacaa agtatgaatt
     1021 tggaaaggcc cctgatggtt cggtgctatt gattgatgag gttcatacac ccgactcaag
     1081 cagatactgg ttagcccatt cttatgagtc ccggtttcag aatggtcttg aacccgaaaa
     1141 tattgataag gagtttttga ggttgtggtt taaagatcac tgcaatccct atgaagataa
     1201 ggttctcccc gatgctccag aagagcttgt tacggaactg gcttggcgat acattttctt
     1261 gttcgagact ataacaaaat caagatttca gatacatgag accatggaac ctatacatga
     1321 tagaatttgc cgcaatgtct caaaggcatt gctatcacta cagaactagt tttaatccga
     1381 gcagttaata atcaatgtta agtgtcaggt gcttttttct gttacaaaag atcaagcctt
     1441 aagctatagg cacttgtaaa caaccttcaa cttaaaatgc agtttccgtt actgaatatg
     1501 ttctgatgac aatggttgat tgtttttacc atttttgtat tggtaacaag gtttatattt
     1561 tgataaaagg tttattgttt aatgcagaac ctaaatttca atgct
//
LOCUS       XR_011778718             966 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904264), ncRNA.
ACCESSION   XR_011778718
VERSION     XR_011778718.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139904264"
                     /note="uncharacterized LOC139904264; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904264"
     ncRNA           1..966
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904264"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904264"
ORIGIN      
        1 cgtcgtccgc ctctccctcg agtagaacca aaattggagg tccgattgtc tttttcgttg
       61 gagcgagatg tttcacgatg attggtggtg gtgctgagtg cactttcatg agcgatttca
      121 gaacttgaag agttgcgatt gatgtgagct tcttccaaga tgagttttga cctagcttca
      181 taaaattggg gtagtttttc tgactgtgag atgtaggtgc caattgttgc ataattgtca
      241 cctaaaccag caaccatttg gagtaccatt cgttgatcag tgacattaag accaacgttg
      301 ttcatttgat ccgcacgcat cttcacttct tgacaatatg cggatacatt tggaaagttg
      361 tctaatctga ggttggtaaa tctgtgttca agagcaacag cacaagagcc ttgattatcg
      421 tgaaaaatgc ttttaagacg atctcacgcc ttcttagcag atgtatcagt ttcaagaatg
      481 gtgtgtaaca agtctttgga gatggtagcg tagatccatt ggagaacaat ggcgtcttga
      541 cgagcccaaa cttcaggaga gatggcgtcg gctttagaag aaccagcatg tggtgcttca
      601 gaggttaagt gatcgattac gtcatgggca cgacaatgaa ttttgaacaa ctctgcccat
      661 gagttgtact gactggtttc aatttccaat ttgattggta cggaatggat gatatgattg
      721 attggtagtg gaattggaag cttggattcg gccatggatg agataaagaa gagggcagga
      781 agtgttttag aaaaagaaaa gagggaccga tatcaagtct gataccatgc tttcagaatt
      841 gttggaaggg cagatgtcaa ggaaatggtt gcaggatcag gttgtggtgc gacacttgga
      901 tttggaactt gagcacaacc ggattcttca caagtaccga aatccttcat ttatttactt
      961 tttcgt
//
LOCUS       XM_071886209            1536 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aldehyde dehydrogenase 1
            (LOC139904265), mRNA.
ACCESSION   XM_071886209
VERSION     XM_071886209.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1536
                     /gene="LOC139904265"
                     /note="aldehyde dehydrogenase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139904265"
     CDS             1..1506
                     /gene="LOC139904265"
                     /codon_start=1
                     /product="aldehyde dehydrogenase 1"
                     /protein_id="XP_071742310.1"
                     /db_xref="GeneID:139904265"
                     /translation="MSSVVANGSSKSPKTHEIKFTKLFINGDFVDSISGNTFETINPT
                     TEEVIAKVAEGRKEDVDLAVKAAREAFDNGPWPRLSGEARRNIMLRFADLIDENADKI
                     ATLEVMDGGKLFGASKYFEVPICSETFRYFAGASDKIRGATLKMSRNIQAYTLREPIG
                     VVGHIIPWNVPAYTFATKVAPSLAAGCTMVIKPAEHTPLTALFLAHLSKLAGVPDGVI
                     NVVNGFGETAGAAISSHMDIDAVTFTGSTEVGRAVMKAAAESNLKPVSLELGGKSPFI
                     VFDDADLDKAAELAVIGNLNNKGEMCVAGCRVFVQEGVHDVFVKKLEGMVKAWPIGDP
                     FDLATRHGPQNNKQQYEKVLSCIENGKKEGATLVTGGKPFGEKGYYIEPTLFTNVTDD
                     MSIANEEIFGPVISVFKFKTVEEVIKRANATKYGLASGIMTKNIDIANTVSRSIKAGA
                     VWINCYLALDRDAPHGGYKMSGFGREQGLEALEHYLQLKTVATPIYDSPWL"
     misc_feature    1..1503
                     /gene="LOC139904265"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; Region: ALDH-SF; cl11961"
                     /db_xref="CDD:448367"
     misc_feature    order(493..507,529..531,574..576,580..585,727..738,
                     745..747,754..759,802..810,904..906,1195..1197,1201..1203,
                     1279..1281,1393..1395)
                     /gene="LOC139904265"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:143395"
     misc_feature    order(505..507,802..804,895..897,904..906)
                     /gene="LOC139904265"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 atgagttcag tagtagccaa tggaagttcc aagtctccaa aaacccatga gatcaagttc
       61 actaaactct ttatcaatgg agactttgtt gattccattt caggaaatac atttgagacg
      121 ataaacccga caaccgagga ggtgatagca aaggtggccg aagggagaaa agaagacgtt
      181 gatctagctg ttaaggctgc ccgtgaagct ttcgacaatg gaccatggcc tcgattgtct
      241 ggcgaagcac gacgaaatat tatgttaaga tttgcggatt tgattgacga gaatgcagat
      301 aaaatagcga cgttggaagt aatggatggt ggaaaactgt ttggcgcatc gaagtacttt
      361 gaagtaccaa tttgttcaga aacatttcgt tattttgctg gtgcatcaga caaaatccgc
      421 ggagctactt taaagatgtc tcgtaatatt caagcataca cattacgtga gcccattggg
      481 gtcgttggac atatcattcc atggaatgtt cctgcctaca catttgccac caaggttgca
      541 ccatctttag ccgcaggctg cactatggtg atcaaaccag ctgaacatac acctctgacg
      601 gctctttttc tcgctcactt atcaaaactg gctggtgttc ctgatggggt gattaacgtc
      661 gttaacgggt ttggagagac tgctggtgct gcaattagct ctcatatgga cattgatgcg
      721 gtcacattta cgggatcaac agaagtgggt cgtgcggtaa tgaaagctgc agcagaaagc
      781 aatttgaaac ccgtgtcact cgaactagga ggaaagtcac ctttcattgt ttttgatgat
      841 gcagatcttg acaaagccgc agagcttgct gttatcggaa atttaaataa caaaggtgag
      901 atgtgtgtag cagggtgtcg tgttttcgtt caggaagggg tgcatgatgt tttcgtcaag
      961 aaactagaag ggatggtgaa agcttggccc attggagacc catttgatct cgccactcgt
     1021 catggacctc agaacaataa acagcaatac gaaaaggtac tttcttgcat tgaaaatggc
     1081 aaaaaggaag gtgcaacttt ggtaacaggc ggtaagccgt ttggagagaa aggatactat
     1141 atcgagccaa ctttattcac aaacgttact gatgatatgt ccatagccaa tgaggaaata
     1201 ttcggccctg taatctctgt cttcaaattc aagaccgttg aagaagtgat caagagagca
     1261 aatgccacaa aatacgggct cgcatcaggg ataatgacaa aaaatattga cattgcaaac
     1321 acagtttcaa gatcaattaa agcaggtgcg gtgtggatta actgttatct agcacttgat
     1381 cgagacgcac ctcatggagg atataaaatg agtgggtttg gaagagaaca aggattagag
     1441 gcacttgaac attatcttca acttaaaact gtggctacac ctatctatga ttccccatgg
     1501 ctttaagctg ttaaataatt cgaaacctgg tcaaat
//
LOCUS       XR_011778719             749 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904266), ncRNA.
ACCESSION   XR_011778719
VERSION     XR_011778719.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..749
                     /gene="LOC139904266"
                     /note="uncharacterized LOC139904266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904266"
     ncRNA           1..749
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904266"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904266"
ORIGIN      
        1 agactatatc aaccatgtac aactttcata tcctcaagat atggatattg ataatggaat
       61 aagttgaact taaggtaaga gacagtatat ggatatctct cgcacctgga aagttaacat
      121 tggtagctgg cattcttgat gatggacgtg aagctctttt acgtttggat gatcctaaac
      181 ctactaaagt ggttcagtat gacaaccaat ttacaagagg agacaatcaa agtcaaagtt
      241 cctacttttt ttagctcttc tgacgatgat tcaatttcaa ctccatctaa gtcgaatagc
      301 aagaaaaggc gtaataagga tgatgatttc aacaaaaacc atgtcaaaga ccaagatgcg
      361 taaagtattt gatgatagca aactgaatat agtcccaaag gctcacattt caaaacgttc
      421 aacctctaac ccaaagacac caaatctgca acttcaaaac cggtacgaga aggttctact
      481 gaatccacaa ttgatgttaa gccatgtaag cgcttcttgg attttgatta tacactatca
      541 agaagtaagc ttgcaaagaa tattgttgaa atttcaaagg atttgttcaa atatagaaat
      601 gggcagcata agggggaaaa tacttgtgtt tcaaaaacag atgcttggct aagattatca
      661 ctatttgtaa gatattgtac atttattatg ctttggtgaa ctgatgttat ttgatgtgcc
      721 ccacgttaat gtttatgttc tcatattgc
//
LOCUS       XM_071886210            1659 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904267), mRNA.
ACCESSION   XM_071886210
VERSION     XM_071886210.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1659
                     /gene="LOC139904267"
                     /note="uncharacterized LOC139904267; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904267"
     CDS             54..1511
                     /gene="LOC139904267"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742311.1"
                     /db_xref="GeneID:139904267"
                     /translation="MMYSSHEFTSSDSFSSQATVEKSKGSNLIAKLMGLDEFPSKSLP
                     SSPRKQSDITSKIRPVFDFDLPNAKKPQFFIQKVNREHTSLDGIIEMMQYKGLLGSKK
                     RENKRTGKSYMDDSPPIVLMRPHRLGSDIQNVKVYDNPIRKLHREKAKAEEDISVKNR
                     GKLKLPSDNQKTFVHVVTKPQRKQEMEKKVDKVQKIAPRVKGKPVVNTKTATVVSKND
                     FLKQVKPSQRSVLPDPVTKRISSSVSSSNKSNNCRKNPSIEKPTIIQEVLQINSLNQN
                     ETQDSGVKLEEIDNLRQHSLCEAFEEDSDSANDAVTCTNHPETINNRIETCKETDVIY
                     VNERKARILQSVSNFQDSELLYQDYVDEFLEHEKQRQNPLGFMLRSTVCNSENHAMRE
                     IAKAIESLKSYSMYTKETSNADKVSEILERDIFLSTIGGAWSSGWKDGCTVNEVEEVV
                     LDMEKMVLSKLIDGMLMELVSSADLCKRQGMHLRV"
ORIGIN      
        1 aattgcagct gtctcctgat gtagcttcaa ctagctcaag cagatcttct tcaatgatgt
       61 actcatctca cgagtttact tcttctgatt ctttttcatc tcaggctaca gtggaaaagt
      121 caaaagggtc aaacttgatt gcaaaactta tgggtttgga tgagtttcct tcaaaatcgc
      181 ttccttctag tcctcgtaaa cagtcggata tcactagcaa gataaggcct gtatttgatt
      241 ttgacttgcc aaatgcaaag aaaccgcagt ttttcatcca aaaggtgaac cgagaacata
      301 cgtcattaga tggaataatt gaaatgatgc aatataaagg acttctggga agcaaaaagc
      361 gtgaaaataa acgaactggt aaaagttaca tggatgattc acccccaatt gttttaatga
      421 gaccccatcg tttaggttcc gatattcaga atgttaaagt gtatgacaat ccaattagaa
      481 agcttcatcg tgaaaaggca aaagccgaag aagatatatc tgtcaagaat agaggaaaac
      541 tgaaattgcc ttctgataac caaaaaactt ttgttcatgt tgtcacgaaa ccacaaagaa
      601 agcaggaaat ggagaaaaaa gttgataagg ttcaaaagat tgcaccacgc gtcaagggga
      661 aaccagtagt gaacacaaaa acagcaactg tagtttcaaa aaacgatttt ttgaagcaag
      721 tgaagccgtc acagagaagc gttcttccag atcccgttac caaacgaata tcttcttcag
      781 tttcatctag caacaagtca aataactgca ggaagaatcc aagcattgaa aagcctacca
      841 taattcagga agttttgcag attaattcac ttaatcagaa cgaaactcag gattctggag
      901 ttaaacttga agaaattgac aacttgagac agcactctct ctgcgaagct tttgaagaag
      961 attcagactc tgctaatgat gctgttacat gcacaaatca ccctgaaacc attaataatc
     1021 gaatagaaac ttgcaaagaa actgatgtta tttatgtcaa tgaacggaaa gcaagaatct
     1081 tgcaaagtgt aagtaatttt caagattcag aactgcttta tcaggactat gtagacgagt
     1141 ttttggagca tgaaaagcaa aggcaaaatc cattaggatt catgctacga tcgacagttt
     1201 gcaattctga gaatcatgca atgagggaaa ttgctaaagc aattgaaagc ttaaaaagtt
     1261 acagtatgta tacaaaagag acatcgaatg cagataaagt ttctgaaatt ttggaaagag
     1321 atatattttt gagtacaatt ggaggagcat ggagtagcgg ttggaaagat ggttgtactg
     1381 taaatgaagt tgaagaagtt gtgttagata tggagaagat ggttttgagc aaattaattg
     1441 atggtatgct tatggaactt gttagcagtg ctgatttgtg taaaagacaa ggtatgcact
     1501 tgcgcgtttg aaagatacta actttttaat agtgttttgt agcatgatat gtatgggtct
     1561 gtgtagcgtt tccaccatat cgtttcgtta taatcagtta atgggacttg gccggaaagt
     1621 gttcttgcct ttatcattag ctcatgtaat ccccattta
//
LOCUS       XM_071886211            2215 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904268), mRNA.
ACCESSION   XM_071886211
VERSION     XM_071886211.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2215
                     /gene="LOC139904268"
                     /note="uncharacterized LOC139904268; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139904268"
     CDS             127..408
                     /gene="LOC139904268"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742312.1"
                     /db_xref="GeneID:139904268"
                     /translation="MLEGKAYVKDTDMPVKMQVHAMDSASHALDLYDVVDSTSIAAYI
                     KKEFDSIYGGGWQCVVGSNFSCFFTHSKGTFIYFSLETLSFLIFKGASS"
     misc_feature    139..393
                     /gene="LOC139904268"
                     /note="Dynein light chain type 1; Region: Dynein_light;
                     pfam01221"
                     /db_xref="CDD:460119"
ORIGIN      
        1 ctaaatacta taaatacaaa gaatcttggt ttttataagt atagtatcaa gaaaatttta
       61 gatacaaaga atttgatttt tgtaagacaa tttatttaat caagaaagtt gttaaaagaa
      121 gaaagaatgt tggaagggaa agcatatgtg aaagatactg atatgccagt gaagatgcag
      181 gttcatgcaa tggattctgc atctcatgct cttgatcttt atgatgttgt cgactccact
      241 tccattgctg catatatcaa gaaggaattt gatagtattt atggtggtgg atggcaatgt
      301 gtggtgggtt caaattttag ttgcttcttc actcactcaa aagggacttt catctatttc
      361 tcattggaga ctctcagttt ccttatcttt aaaggtgctt catcttgatt ggttcaatca
      421 agaactaaag tcaacatctt ttcatttgta gaaagcaatc acaaaattcg tagtttgtaa
      481 tcctgttcta ttagccataa ccttcatatc agtttggtag aaggcattct ttatgcatca
      541 tctcattgta ctctatgcat taaaacttca ttgtgaagca gagctagaat gatgatatta
      601 tgaattcttc tcaaaattat tgggattaca aaggaatcca aagtttgccc atttagacca
      661 tcgctaacgg gcttcaaatt aggcgtcaaa atgatgtatt tttttacccc taacgcttgt
      721 tactggcgtc aaatttgaac ttttttggcg tcagttatag gagtgacata caaaaatcag
      781 gagtgacatc attttacctt atttatttat ttttttttca ccgaacttcc aaacatattt
      841 tgatacatca cccaaaacat tttccactca aatttaagat tcaccataac ataacttcaa
      901 aattttacac tgcaacatca cagttaaaaa aaattctccc tcctaaaaaa aacactaaat
      961 ttacctccac gtcacagtct ctattccccc tcctaaaaaa acactaaatt tacctccacg
     1021 tcacagtcac tgtaacggac agtcttataa cttagccaac tacctccatt ttaaaataat
     1081 tagacctatc aaaattcaaa ctttttgact tgagataagc gtaaacaccg ttaactataa
     1141 gttttcaact aatatcttat atatctgcta aaatttagtt gcagattcat gatatcaagg
     1201 tgaccaaaac accttaaatg gggattacat gagctaatga taaaggcaag aacactttcc
     1261 ggccaagtcc cattaactga ttataacgaa acgatatggt ggaaacgcta cacagaccca
     1321 tacatatcat gctacaaaac actattaaaa agttagtatc tttcaaacgc gcaagtgcat
     1381 accttgtctt ttacacaaat cagcactgct aacaagttcc ataagcatac catcaattaa
     1441 tttgctcaaa accatcttct ccatatctaa cacaacttct tcaacttcat ttacagtaca
     1501 accatctttc caaccgctac tccatgctcc tccaattgta ctcaaaaata tatctctttc
     1561 caaaatttca gaaactttat ctgcattcga tgtctctttt gtatacatac tgtaactttt
     1621 taagctttca attgctttag caatttccct cattgcatga ttctcagaat tgcaaactgt
     1681 cgatcgtagc atgaatccta atggattttg cctttgcttt tcatgctcca aaaactcgtc
     1741 tacatagtcc tgataaagca gttctgaatc ttgaaaatta cttacacttt gcaagattct
     1801 tgctttccgt tcattgacat aaataacatc agtttctttg caagtttcta ttcgattatt
     1861 aatggtttca gggtgatttg tgcatgtaac agcatcatta gcagagtctg aatcttcttc
     1921 aaaagcttcg cagagagagt gctgtctcaa gttgtcaatt tctgtagaga acgcagatca
     1981 accatgtaaa taaaaataaa aatataggta tataaacgtt agaagcagtg gcataagtaa
     2041 aaaagttgtg aacttggtta tactttttgc tcgggagcga aaacatcata ccttatggac
     2101 cataatagta actattatgc gacatcatca ttatgacata gtaacatgaa agtattacct
     2161 taccaaaagt taaaaacaaa tttcgtactt aatcggtgac caaaagtcaa cacct
//
LOCUS       XR_011778720             472 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904269), ncRNA.
ACCESSION   XR_011778720
VERSION     XR_011778720.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..472
                     /gene="LOC139904269"
                     /note="uncharacterized LOC139904269; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904269"
     ncRNA           1..472
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904269"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904269"
ORIGIN      
        1 aagatggtta ttgtaaaaca ctttactcgg actactatga tcgattaggc tcaacatcat
       61 ccaatctccg atccacatct ttatactaca tcttgggagg aagttttaga acgtgttaat
      121 gcttagctgc tgcgatggga ggaaattcaa caatatatcg atcaaattgg agttggtgta
      181 cacttcaacc cgtttgtttc ttggaacaac aaggtgcgta taatcgtagt caatatggat
      241 atagaaatgt caacttaatg gccgtctcct cttctgcgct gctaccacgt aggttttact
      301 tctgttctca ttattaagct tgtctaaatt ttaccgttgg agctgttctt aaagagatat
      361 aaaaagtctt gctcatcttc aacactaagt tgtactattg ctaccgataa aacttttcct
      421 aatgttatac tgtaagaatt actgataaca aatgagaccc ttttttactt ca
//
LOCUS       XM_071886212            2168 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides proline-rich receptor-like
            protein kinase PERK15 (LOC139904270), mRNA.
ACCESSION   XM_071886212
VERSION     XM_071886212.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2168
                     /gene="LOC139904270"
                     /note="proline-rich receptor-like protein kinase PERK15;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 44 Proteins"
                     /db_xref="GeneID:139904270"
     CDS             40..2001
                     /gene="LOC139904270"
                     /codon_start=1
                     /product="proline-rich receptor-like protein kinase
                     PERK15"
                     /protein_id="XP_071742313.1"
                     /db_xref="GeneID:139904270"
                     /translation="MSSPPPVTSPAPTTPVTPPPNATTSPPPAAAAPPPSTTASPPPA
                     SSSPPAPTPPSSSPPPPDTPSPANSPPAPPTSNVTPPSTTSPPSPPAPPTSRNSPPSP
                     QGRSTPSPPAPRGGSTSPPKTSSSENNSSSGISTGVVVGIAIGGVLILVVFSILFLCC
                     KKKRKRIEPPTGYYVPPPPKVDSYGGPPQQYQQNAPPPSDHVVTMPPKKPNPPPAMTA
                     RPQHSPVNAPAQPPPPPAFISSGGGSGSSYSGGSTPLPPPSPGMSLGFTKSTFTYEEL
                     SMATDGFSKANLLGQGGFGYVHRGVLPNGKEVAVKQLKTGSGQGEREFQAEIEIISRV
                     HHKHLVSLVGYCMTGAQRLLVYEFVPNNAMEFHLHGKDRLVMEFSSRLRIALGAAKGL
                     AYLHEDCHPKIIHRDIKAANILLDFNFEAKVADFGLAKITSDVATHVSTRVMGTFGYL
                     APEYAASGKLTDKSDVFSFGVVLLELITGRRPVDSAQTFMDDSLVDWARPLLSRAMDD
                     GNFDAIADSRLHREYNHNEMARMVSCAAACVRHSARRRPRMSQVVRVLEGDVSLSDLN
                     EGIRPAHSSAFGSHGSSDYDTMQYNDDMAKFRKVALGGTQEYASSEYSRPTSEYGLYP
                     SGSSDEGGNTREMEMGKYKRDGPSYSEGF"
     misc_feature    904..1713
                     /gene="LOC139904270"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(904..918,928..930,964..966,970..972,1057..1059,
                     1105..1116,1126..1128,1132..1134,1258..1260,1264..1266,
                     1270..1275,1279..1281,1312..1314,1321..1323,1372..1383)
                     /gene="LOC139904270"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(904..918,928..930,964..966,970..972,1057..1059,
                     1105..1116,1126..1128,1258..1260,1264..1266,1270..1275,
                     1279..1281,1312..1314)
                     /gene="LOC139904270"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(916..918,1126..1128,1132..1134,1258..1260,
                     1264..1266,1270..1272,1321..1323,1372..1383)
                     /gene="LOC139904270"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1309..1329,1360..1383)
                     /gene="LOC139904270"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 ttgagtaaat cttgaatatt gttttgataa atcttgatta tgtcatctcc accaccggtg
       61 acatctccgg caccaacaac acctgtaacc ccaccaccga atgccaccac ttcaccacca
      121 cccgccgccg ccgcaccacc tccctctact accgcttctc ctcctccagc atcttcttcc
      181 ccaccagccc ctacaccccc ttcatcctct ccaccaccgc ctgacactcc atctccggct
      241 aactccccac ctgcgccacc tacatccaat gttacaccgc cgtccaccac atctccaccg
      301 tctccaccgg cgccacccac ttcaagaaat agtccaccgt ctcctcaggg aagatctacg
      361 ccgtctccgc cagcgcctag gggtggttcc accagtcctc cgaagacatc atcgtcggaa
      421 aataatagtt cttccgggat ttcaactggg gttgtagttg ggattgcaat tggtggggtt
      481 ttgatacttg ttgtatttag catattattt ctttgctgta aaaagaagag aaagagaatt
      541 gagcccccta ctggttatta tgttccacca ccacctaaag ttgattctta tggtggtcca
      601 cctcagcaat atcaacaaaa tgcaccacca ccttctgatc atgttgtgac aatgccccca
      661 aaaaaaccta atcctccacc agcaatgaca gctagaccac aacattcacc cgtaaatgct
      721 ccagctcagc ctccaccacc accggcattt ataagcagcg gtggtggttc tgggtcgagt
      781 tattcgggcg ggtcaactcc acttccacca ccgtctcctg gcatgtcact agggtttaca
      841 aagagcacat ttacttatga ggaattatca atggccacag atggtttttc aaaagctaat
      901 cttcttggac aaggtgggtt tggatatgtg catagagggg tgcttccgaa tgggaaagaa
      961 gtggcagtta agcagttaaa aacaggtagt ggacagggtg aacgtgaatt tcaggcggaa
     1021 attgagataa ttagtcgagt tcatcataaa catctcgtgt ctttggttgg atattgcatg
     1081 actggagctc aaagattgct tgtctatgag tttgttccta ataacgcaat ggagttccac
     1141 ttacatggaa aggatcgcct tgtaatggag ttctcctcaa gattgcgaat tgcgcttgga
     1201 gctgcgaaag gactagctta tctccacgag gattgccatc ctaagattat tcatcgtgat
     1261 attaaagctg ctaatattct tcttgatttc aattttgaag caaaggttgc tgattttggg
     1321 cttgccaaaa ttacttctga cgttgctacc catgtttcaa cccgagtgat gggaactttt
     1381 gggtacctag ctccagagta tgctgcatca ggaaaactca cagacaaatc tgatgttttc
     1441 tcgttcgggg tcgtgctctt ggaattgatc acaggacgca gacccgttga ttcagctcaa
     1501 acgtttatgg acgatagttt agtagattgg gcaaggcctt tgctctcacg tgcaatggat
     1561 gatgggaact ttgacgctat agctgattca cgtctacaca gagaatacaa ccacaacgaa
     1621 atggcccgta tggtttcttg tgccgccgcc tgtgtccgtc actcagcccg ccgccggcct
     1681 aggatgagcc aggtggttcg agtcttggaa ggagacgtct cactctctga cctaaacgaa
     1741 ggaatccgac ccgcccacag ctcagctttt gggtcccacg gaagctcgga ctatgacaca
     1801 atgcagtaca atgacgatat ggcgaagttc aggaaagtgg ctttaggagg tacacaagag
     1861 tatgccagta gtgaatatag tcgacccact agtgaatacg ggttgtatcc atctggatcc
     1921 agtgatgaag ggggaaatac ccgcgaaatg gaaatgggaa agtataaaag agacgggccg
     1981 agttatagtg aaggattttg atggtaaaaa tcaatggtgt ataaatatcc ttgctaattc
     2041 ttgatgatat tatctttgta ttttacagca aaaattgtga taatggggca tgttttgctg
     2101 attttgctaa ctagttttga tttgttgcga gtttgattgt acttatttac attacttatt
     2161 gtttttat
//
LOCUS       XM_071886213             919 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription repressor
            OFP8-like (LOC139904271), mRNA.
ACCESSION   XM_071886213
VERSION     XM_071886213.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..919
                     /gene="LOC139904271"
                     /note="transcription repressor OFP8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904271"
     CDS             25..831
                     /gene="LOC139904271"
                     /codon_start=1
                     /product="transcription repressor OFP8-like"
                     /protein_id="XP_071742314.1"
                     /db_xref="GeneID:139904271"
                     /translation="MDNNFKLRISKLFQSSFNSCRTEKHFSDVAEKPFFFPENRHHRQ
                     LIDLFSPKPQPLSYSSCKPKPHYPKPKTSDQKTHFPAAKPDGKPHSIFPVAPPLFYDK
                     KPKTTKTKKPHYRKPIKFQDFTSTADNYYYDCCSSDEDYEIDDETTLFSSRSFSSESS
                     VSFYKNRVPRRKKSKRGGCRDRKATDVIPIKGKGKIVKDSVAIVKKSSNPHEDFRVSM
                     LEMIVERQIFGTQDLENLLQCFLSLNSEEHHRVICDVFTEIWETLFSNYV"
     misc_feature    643..816
                     /gene="LOC139904271"
                     /note="Transcriptional repressor, ovate; Region: Ovate;
                     pfam04844"
                     /db_xref="CDD:461454"
ORIGIN      
        1 aaaaagttaa aaactctcca caaaatggat aacaacttta aacttcgaat atctaaatta
       61 ttccaatcat ccttcaactc ttgccggact gaaaaacact tctccgacgt cgctgaaaaa
      121 ccgttcttct tcccggaaaa ccgccatcac cgtcaactta tcgacctttt ttctcctaaa
      181 ccccaaccac tttcatactc atcttgtaaa cccaaacccc attatcccaa accaaaaaca
      241 tccgaccaaa aaacccattt tccggcagct aaacctgacg gaaaaccaca ctctattttc
      301 cctgttgccc cacctctgtt ttatgacaaa aaaccgaaaa caaccaagac aaagaagccc
      361 cactaccgga aaccaataaa gtttcaagat ttcacatcaa ctgcagataa ttactactac
      421 gattgttgca gtagtgatga agattacgaa attgacgatg aaactactct gttttcatct
      481 cgatcatttt cgtcggaatc ttcggtatct ttttacaaaa acagagtacc acgtcggaaa
      541 aaatctaaga ggggtggatg tagagatcga aaagcaaccg atgtgattcc gattaaagga
      601 aaagggaaaa tagtgaaaga tagtgttgca attgtgaaga aatcaagtaa cccacatgaa
      661 gattttaggg tttcaatgtt ggagatgatt gttgaaagac aaatatttgg aacacaagat
      721 ttagagaatc tactgcagtg ctttttatca ctaaattcag aagaacatca tagggttatt
      781 tgtgatgttt ttactgagat ttgggagact ctgttttcta attatgttta gattaacttt
      841 ttagtactct gtttttattc ttcatgcact tgtatttttt aggatttagg aatggttaat
      901 taaagttaat ttaattaaa
//
LOCUS       XM_071886214            1492 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides indole-3-pyruvate
            monooxygenase YUCCA2-like (LOC139904272), mRNA.
ACCESSION   XM_071886214
VERSION     XM_071886214.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1492
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1492
                     /gene="LOC139904272"
                     /note="indole-3-pyruvate monooxygenase YUCCA2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 56 Proteins"
                     /db_xref="GeneID:139904272"
     CDS             77..1333
                     /gene="LOC139904272"
                     /codon_start=1
                     /product="indole-3-pyruvate monooxygenase YUCCA2-like"
                     /protein_id="XP_071742315.1"
                     /db_xref="GeneID:139904272"
                     /translation="MEEYAKRVHDPYFQTELATTTVLGDESIVNRVWVPGPVIVGAGP
                     SGLAAAACLKNRGIRAPILEKSDCIASLWQVKTYDRLRLHLPKQFCQLPFMPFPKEFP
                     TYPTKQHFLAYLEAYANNFDLKPIFNTMVVKAEYDGGSGLWRVKTKVTEYVCRWVIVA
                     TGENAEEVVPNIEGMNEFIGPVLHTSCYKSGDCFKNKKVLVVGCGNSGMEVCLDLCNH
                     NACPSIVVRDSLHVLPQEMLGRSTFGISMCLLKWFPIKVVDQLLLMASHFMIGDTERL
                     GLSRPKLGPLELKNISGKTPVLDVGTLAKIRSGDIKVYPGIKRLVCNNVEFLDGRMEK
                     FDAIILATGYKSNVTTWLKDTNICSKKDSFPIEGWKGECGLYAVGFTKRGLLGTSMDA
                     VRIAEDIARQWDIDTKQFNLLRHPPP"
     misc_feature    188..1279
                     /gene="LOC139904272"
                     /note="Predicted flavoprotein CzcO associated with the
                     cation diffusion facilitator CzcD [Inorganic ion transport
                     and metabolism]; Region: CzcO; COG2072"
                     /db_xref="CDD:441675"
ORIGIN      
        1 gattcttaaa aataaactta gtccacatca cacaaacttc attcttttgc atgaatttta
       61 caaccaaaac ttgctaatgg aagaatatgc aaagagagta catgatccat atttccaaac
      121 tgaattggca actacaacgg ttttaggaga tgaatccata gtaaaccgtg tttgggttcc
      181 tgggccagtc attgttggag cgggcccttc agggctggct gcagctgctt gtcttaagaa
      241 tcgaggcatt cgtgccccga ttcttgaaaa gagcgactgt atagcgtctt tgtggcaagt
      301 taaaacatat gatcgcttac gtcttcatct ccctaaacaa ttttgtcaac tcccatttat
      361 gcctttccct aaagaattcc caacttaccc aactaaacaa catttcttag cataccttga
      421 agcctatgca aataacttcg atttaaagcc tattttcaat acaatggtgg tgaaggcgga
      481 atacgatgga ggaagtgggt tgtggagagt gaaaacaaag gtgactgagt atgtttgccg
      541 gtgggtgata gttgctaccg gagaaaatgc tgaagaagtt gtaccaaata tagaagggat
      601 gaatgagttc attgggccag ttttgcatac aagttgttac aaaagtggtg attgttttaa
      661 aaacaagaag gttttggtgg ttgggtgtgg gaattcaggc atggaagttt gcttggatct
      721 ttgcaaccac aatgcttgcc cctcaatcgt ggttcgagat tcattgcatg tattaccaca
      781 agaaatgctt ggtagatcaa ctttcggaat atccatgtgc ttgctcaaat ggtttcctat
      841 aaaagttgtc gatcagctct tgcttatggc gtcacatttc atgattgggg acacagagag
      901 acttggtctc agtagaccta agctcggtcc ccttgagcta aagaacatct caggcaaaac
      961 gcccgtgtta gatgtgggca cacttgcaaa gattagaagc ggagacatca aggtttatcc
     1021 aggaataaag agattagtat gcaataatgt ggagttttta gatggaagaa tggagaaatt
     1081 tgatgctatt atcttagcta ctggttataa aagtaatgtc actacttggt taaaggacac
     1141 aaacatatgc tcaaaaaaag atagttttcc catagaaggt tggaaaggtg agtgtggatt
     1201 atacgccgtc gggttcacaa aacgtggctt acttggtaca tccatggacg ctgttagaat
     1261 tgcggaagac attgcacgcc aatgggacat agacacgaaa caatttaact tgttacgtca
     1321 tccaccacca taactttgag ttcatatgtg cttagcaaat taagattgtt tatattgcaa
     1381 gtgtatttag ttagcttcat tagaaaatat aatgaactag ggtatgttca tattctacaa
     1441 tttaagtgta caatagtata tattttcgat tgattatttg attatatgta ta
//
LOCUS       XM_071886215             671 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RING-H2 finger protein
            ATL18-like (LOC139904273), mRNA.
ACCESSION   XM_071886215
VERSION     XM_071886215.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..671
                     /gene="LOC139904273"
                     /note="RING-H2 finger protein ATL18-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904273"
     CDS             203..643
                     /gene="LOC139904273"
                     /codon_start=1
                     /product="RING-H2 finger protein ATL18-like"
                     /protein_id="XP_071742316.1"
                     /db_xref="GeneID:139904273"
                     /translation="MKQYWICDGNATVLFYVCVLLLLFRSRRDIFRILKIFMHDVFQE
                     DHIRDATLHDLDLPVIKFEDLQNRRGDRSFDDVCLVCFMEYEKDDGVTQLSRCGHVYH
                     TNCVAKLLNEAMVERWRPDTYTFHFPIGLKEIFRCAFAHFKDIT"
     misc_feature    425..>532
                     /gene="LOC139904273"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    539..>592
                     /gene="LOC139904273"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 taattattat actgagtata caattatcat ttacaaacaa aacacaagca tgttatccac
       61 actctttact ttggcaacca aacttgttga acctaactcg gaagtgtgtt cacctagcta
      121 gtccgtttga ctttcatctc aaacttcatc ctatattatt atgacttcaa aacacaacta
      181 agtatctcac aaatcgtata caatgaaaca atattggatt tgtgatggta acgctacggt
      241 tttgttttac gtttgcgtat tacttttact gtttcggtcc agacgagaca tattcagaat
      301 cttgaagata ttcatgcacg atgtttttca agaagatcat attcgagatg cgacacttca
      361 tgatttggat cttccagtca tcaagtttga agacttgcaa aacagaagag gtgacagatc
      421 atttgatgat gtttgtctcg tttgttttat ggaatatgag aaagatgatg gagtcaccca
      481 acttagtagg tgtggccacg tgtaccacac aaattgtgtt gcgaaactat taaacgaggc
      541 gatggttgaa cggtggcggc cggatacgta taccttccac ttccctattg gtttgaaaga
      601 aatcttccgc tgtgcatttg ctcattttaa agatattact tgaagtcatt cgtgaaaatt
      661 ttcaaaagcc g
//
LOCUS       XM_071886216             800 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904275), mRNA.
ACCESSION   XM_071886216
VERSION     XM_071886216.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..800
                     /gene="LOC139904275"
                     /note="uncharacterized LOC139904275; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904275"
     CDS             29..751
                     /gene="LOC139904275"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742317.1"
                     /db_xref="GeneID:139904275"
                     /translation="MMSLKLLVNKRDHKIVFAEANKDFVDFLFYILTIPIGAITKLLA
                     KEPVMGSLVDLYQSIENLNDMYILHNKTKDTVLNPKSTSYGYVPDQDLLMIPKDLPTT
                     TDKKFYRCSGNNHRCKYITNEPKVLCPNCRWSMSEEVTFVATGAAKVAATTSTAAEEV
                     GFVKEVVTYMVMDDLAVKPMSTISTITLLNKLNIKDVCVLEEKQVEFGMAEGLKLLKA
                     SLECKNVLTRVFLDSEDHVEIV"
     misc_feature    35..>730
                     /gene="LOC139904275"
                     /note="Protein of unknown function (DUF674); Region:
                     DUF674; pfam05056"
                     /db_xref="CDD:461537"
ORIGIN      
        1 ttgaaacctt ttaacaacga aaaatacaat gatgagtttg aagcttttgg tgaacaaacg
       61 agaccacaaa atcgtgtttg cagaagcaaa caaagacttt gtcgatttcc tcttttacat
      121 cctcacaata cctatcggcg cgatcacaaa attactcgca aaagaacccg taatgggcag
      181 cttagtagac ctttatcaaa gcattgaaaa cttaaacgac atgtacattc tacataacaa
      241 gaccaaggac actgttttga acccaaagtc aacatcttat ggttatgttc ctgatcaaga
      301 tttgcttatg attcctaaag atcttcccac aacaaccgac aaaaagtttt ataggtgctc
      361 gggcaataac catcgatgca agtacataac caatgagccg aaggttctgt gtcctaactg
      421 caggtggtct atgtcggagg aggtgacctt tgtggctaca ggggcggcta aggttgctgc
      481 aactacaagt acagcggctg aagaagttgg ttttgtgaaa gaagtggtga cttatatggt
      541 gatggatgat ctggctgtta aacccatgtc caccatttca actattactt tgctcaataa
      601 gttgaatatt aaagatgttt gtgttcttga agaaaagcaa gtcgaattcg ggatggcaga
      661 gggtttaaag ctgctcaagg cctcattgga atgcaagaac gtactgactc gtgtattcct
      721 agactcggaa gaccatgtcg aaattgttta agcaaactac tgtttaatca ttacaaattt
      781 atagtatgca aattcaacaa
//
LOCUS       XM_071886217            2412 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kinesin-like protein KIN-13B
            (LOC139904276), mRNA.
ACCESSION   XM_071886217
VERSION     XM_071886217.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2412
                     /gene="LOC139904276"
                     /note="kinesin-like protein KIN-13B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     Proteins"
                     /db_xref="GeneID:139904276"
     CDS             101..2269
                     /gene="LOC139904276"
                     /codon_start=1
                     /product="kinesin-like protein KIN-13B"
                     /protein_id="XP_071742318.1"
                     /db_xref="GeneID:139904276"
                     /translation="MDTFTMQRSSSKYSSSDNNNFIDVNFNNKWLQSAGLHHLHSSNP
                     NLPPLQEFGFFGNNNAGEGSRLNRGSQRSVADTMTPSACSRSPSFTKYANSELQVSPG
                     EFSPGLLDLHSFDTELLTEVHSENNLNLLHQPLYGEGFDDANAYSLANKFANISCGPT
                     GNNAVTSSLADKEKSSNVAKIKVVVRKRPLNKKELAKREEDIIHIDPNTSSLTVHESK
                     VKVDLTEYVEKHGFFFDAVMDEDVTNDEIYSQTVEPIIPIIFQRTKATCFAYGQTGSG
                     KTYTMQPLPLKASQDIFRLMNHNYRNQGFQLFVSFFEIYGGKVFDLLNDRKKLCMRED
                     GKQQVCIVGLQEYNVSNVETIKELIERGNATRSTGTTGANEESSRSHAILQLAVKKLI
                     DGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDN
                     DQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPNSGSCEHTLNTLRYADRVKSLSKG
                     SSSRKELLSSTSNLRNSVQLPLSSSTLTRSEDVKVERLPYETNRFGWPKQTDRALSLS
                     LTKEHVPVGRSTMYAPQPENHTKDYEGSDEEIMEDDFEFSVDTHEQKNISRFDKPVTQ
                     MTPIAEVTDDLNALLEEEENLVFAHRKQVEETMDIVREEMNLLVEVDQPGNQLDEYIT
                     KLNAILSKKATGIQQLQTRLNNFQKKLGEYNVLSSALSGN"
     misc_feature    638..1609
                     /gene="LOC139904276"
                     /note="Kinesin motor domain, KIF2-like group; Region:
                     KISc_KIF2_like; cd01367"
                     /db_xref="CDD:276818"
     misc_feature    order(662..664,911..913,920..922,926..937,1328..1330)
                     /gene="LOC139904276"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:276818"
     misc_feature    order(1472..1474,1481..1483,1490..1492)
                     /gene="LOC139904276"
                     /note="microtubule interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276818"
ORIGIN      
        1 catacatcat ttctgtatct attccttgtc tgccgtccag ccggcctttc tatattacca
       61 acactttatc aacgctcaac ttttatcatc atctatttac atggatacat ttactatgca
      121 gagatctagc tccaaatatt catcttctga taataataac ttcattgatg ttaatttcaa
      181 caacaaatgg cttcaatcag ctggccttca tcatcttcat tcttcaaacc ctaatttgcc
      241 cccacttcag gaatttgggt tttttggaaa taataatgct ggtgaaggtt caagactaaa
      301 caggggttca cagaggagtg ttgcagatac aatgactcct tctgcgtgtt ctcgttcacc
      361 gagctttacg aagtacgcta atagtgagct gcaagtgtct cccggtgagt ttagccccgg
      421 gttactcgat cttcattcct tcgataccga gctcttaacc gaggttcata gtgaaaacaa
      481 cttgaatttg cttcatcaac ctttgtatgg agaaggtttt gatgatgcca atgcttattc
      541 attggccaac aagtttgcta atatttcttg tggtcccacc gggaacaatg ctgttacgag
      601 ttctttggcg gataaagaga agtcgagcaa tgttgctaaa attaaagttg tggtacgtaa
      661 acggccactg aataaaaagg aacttgcaaa aagggaagaa gatatcattc atatagaccc
      721 taatactagt tcactcactg ttcatgaatc aaaagttaag gttgacctca ctgaatatgt
      781 tgagaaacat ggattttttt ttgatgctgt gatggacgaa gatgtcacaa atgatgaaat
      841 atactcacaa actgtggagc ccattatccc aattatcttc caacgaacaa aagcaacatg
      901 ctttgcttat ggtcaaacag gtagtggaaa aacctataca atgcaaccac tacctttgaa
      961 agcttcccaa gatattttca gacttatgaa ccacaattat cgcaaccaag gatttcagtt
     1021 gtttgtcagt ttctttgaaa tctacggtgg aaaagttttc gatctactta acgatagaaa
     1081 aaaactttgc atgagagagg atggaaaaca acaggtttgc attgtgggat tgcaggagta
     1141 caatgtatca aatgtggaga cgataaaaga attaatcgag cgaggtaatg cgacaaggag
     1201 caccggcaca actggtgcaa atgaggagtc atctcgatcg catgctattc ttcaacttgc
     1261 tgtcaagaaa ttaattgatg gcaatgaatc aaaaccacct cggttggttg ggaaattgtc
     1321 ttttatagat cttgctggaa gtgaacgtgg tgcagatacc accgataatg ataaacaaac
     1381 aaggatggaa ggtgccgaaa tcaataaaag tttgctagct ttgaaagaat gtatcagagc
     1441 cctagataat gatcagggac atattccatt tagggggagt aaattgactg aagttcttag
     1501 agattcattt gttggtaact cacgtactgt tatgatatcg tgtatttcgc caaactcggg
     1561 atcttgtgaa catactctaa acacattacg atatgctgac agggtcaaga gtctatcaaa
     1621 agggagcagc tccaggaagg aattgttatc ttcgacgtca aatcttcgca actcggtcca
     1681 attgccttta tcttcatcaa cgttaacacg ttccgaagat gttaaagttg agagattacc
     1741 atacgaaact aatagatttg gatggcctaa acagacagat agagcgttgt ctttatcttt
     1801 aaccaaggaa catgttcctg ttggaaggtc aaccatgtat gcacctcaac ctgaaaatca
     1861 cactaaagat tatgaaggta gtgatgaaga aattatggaa gatgattttg aattttcagt
     1921 ggacactcac gaacaaaaga acatttcaag attcgataaa ccagtcactc agatgacacc
     1981 tattgccgag gtcaccgatg atctcaatgc tcttctagag gaggaagaaa atcttgtttt
     2041 tgctcaccgg aaacaagtgg aggagactat ggatatcgtt agggaggaaa tgaacctgct
     2101 agttgaagtg gatcaaccag gaaatcagct tgatgaatat attacgaaac tgaatgccat
     2161 tctctcgaaa aaggcaactg ggattcagca attacaaaca agattgaata attttcaaaa
     2221 aaaattgggt gaatacaatg ttctatcatc tgctttgagt ggcaattgat tccacatgct
     2281 tagccaatgt gtgtgactgg ttcctagatt gtctaaagat gagtgtatga agtgtttttt
     2341 cctatcattt ttcgatatgg gttttgggtg tgaattgtgt aagatgtgta acttgtggtg
     2401 atttgtagag at
//
LOCUS       XM_071886219            2276 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904278), mRNA.
ACCESSION   XM_071886219
VERSION     XM_071886219.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2276
                     /gene="LOC139904278"
                     /note="uncharacterized LOC139904278; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904278"
     CDS             106..2094
                     /gene="LOC139904278"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742320.1"
                     /db_xref="GeneID:139904278"
                     /translation="MARGLTMFPHYYTSNLHLIRSGLCFFSLNSAKAHTLLTPTLSKY
                     VRNRLLCTCSYVTHTESVELPKYKEKFSKRMEMAGLKPHHRIAVGVSGGPDSMALCLL
                     AAEWKTSALNAGSIGENDVVDGLLAIIVDHGLRAESKDEAEMVQHRILNMGIRCEIAH
                     CKWTDGRPKMGHLQEAARDMRYEILPHICSQHQISALLIAHHADDQAELFILRLSRNS
                     GVLGLAGMALTTQLFATHRSLDGTSSSVLLVRPLLDFSKQDLYKICQEAKQKWVEDPT
                     NQNTTFARNRIRMSLGNSSSCIFKSELQAIILACRKTRFYVDQVSQSLINQAVIVMPH
                     GYATIDLQILNPSKVSDICLSKFVTLLLQFISQRRRPVRGSAQKLLLDYFRTFPCKSS
                     FTAAGCYLCPAPSSKGTKILICCSTNSVLPMKLESFYVNSSSVQTFNNSSELTQIIEN
                     GRLYLNKMVLNASDVPFLNTTTSTESILTEAKRVKILSEPTYTSIRSLHETELDNFKS
                     KTETSPQDESQKMVESVGVRELRQGQIGHFMDRFLVSWEFINGCGGCCCCGFGQDSVM
                     QVRHMVDADWLYLSKLSNCEKDDSECSEFVRDSARKALLLLKSIPVAARRSLPVLVDS
                     KGQVWSIPSVSFSMCRYLRVCAEFNPRVPVGGGHSSFL"
     misc_feature    358..969
                     /gene="LOC139904278"
                     /note="N-terminal domain of tRNA(Ile)-lysidine synthase
                     and similar proteins; Region: TilS_N; cd01992"
                     /db_xref="CDD:467496"
ORIGIN      
        1 tcgctcgccg tcgccgtcac cgtcaccgtc accgtttccg tggccgtcgc cgccactacc
       61 gtcggcggtc atcacctccg actatataca cacatatatg tttcaatggc aagaggatta
      121 accatgtttc cacattatta tacatcaaat ttacatttaa ttcgaagtgg gttgtgtttc
      181 ttttcactta attctgctaa agctcacacc ttattaactc caacactatc caaatatgtc
      241 cgaaatcgat tgttgtgcac ttgctcttat gttacccata ctgaatcagt tgaactccca
      301 aagtataaag aaaagttctc taaacgtatg gaaatggctg gtctcaagcc ccatcatcgt
      361 atcgctgttg gtgtatcagg tggtccagac agtatggcat tgtgcttact agctgcagaa
      421 tggaaaactt ctgcattaaa tgccggttcc ataggagaaa atgatgttgt cgatgggtta
      481 ttggcaataa tagttgatca tggattacgt gcagagagta aagatgaggc agaaatggtt
      541 caacatcgaa tcttgaatat ggggatcaga tgtgagattg cccattgtaa gtggacagat
      601 ggtaggccca aaatgggtca tttacaagaa gcagctcgag atatgaggta tgaaatatta
      661 ccacatattt gtagtcaaca ccagatatcg gcgttattga tagcacatca tgcggatgat
      721 caggcagaat tattcatcct tagactctct cgtaatagtg gtgtgctcgg acttgcgggt
      781 atggcgttga ccactcaatt gtttgctaca catcggagtc ttgatggaac ttcgagtagc
      841 gttttacttg ttcgaccact tttggatttc tcaaaacaag atctatataa gatatgtcaa
      901 gaagccaaac agaagtgggt ggaagatccc acaaatcaaa acacaacatt tgcacgcaat
      961 aggatccgaa tgtcgttggg aaattcatct tcttgtatat tcaagtctga attgcaagca
     1021 attatattgg cctgtcgaaa aacccgtttc tatgttgatc aagttagtca aagtttgata
     1081 aatcaagcag tgattgttat gcctcatgga tatgctacaa ttgatttaca aattctaaac
     1141 ccatcaaaag tgtctgatat ctgtctatcc aagttcgtga cacttttatt acagttcata
     1201 tcacaaaggc gaagaccagt tcgtggcagt gcacaaaaat tgctattaga ttactttcgt
     1261 acattcccat gcaagtcctc gttcactgca gccggttgtt acctatgtcc agcacctagt
     1321 tccaaaggca ccaagattct tatttgttgt tcaacaaatt ctgttttacc tatgaagctg
     1381 gaatcgttct acgttaattc ttctagcgta caaacgttta acaattcaag cgagctaacc
     1441 caaattatag aaaatggaag attgtattta aataaaatgg tactaaatgc ttcagatgtg
     1501 cctttcttga atactactac atctaccgaa tctattttga ccgaagccaa acgggtcaag
     1561 attcttagcg agcctacata tacaagtata cgttcattgc acgagactga acttgacaac
     1621 tttaagtcca aaaccgaaac ttcacctcag gatgagtcac aaaagatggt ggaatcagtc
     1681 ggtgttagag aacttcgtca ggggcaaatt ggtcatttca tggataggtt cttggtgtca
     1741 tgggaattta taaatggatg tggtggttgt tgttgttgtg ggtttggtca agattcagtc
     1801 atgcaggtcc gccacatggt tgatgctgat tggctgtatc tttctaaatt aagtaactgt
     1861 gagaaagatg attctgaatg ttcagaattt gttcgagact cagcacgcaa agctcttttg
     1921 ttattgaaat ctattcctgt tgctgcaaga agaagccttc ccgtcttagt cgattcaaaa
     1981 gggcaagttt ggagcatccc gagtgtaagt tttagcatgt gccgatattt gagggtatgt
     2041 gctgaattca atcccagagt acctgttggc ggtggtcaca gttcgttctt atgaccctct
     2101 gctgcagacg agttcaaacg tcaactgaaa ttaaaaacac aaatgaagtt tgaaaacgtc
     2161 gacgtttttt tagttagtaa ttatttcaat tttgaaattg taaagctgta ggctagttta
     2221 tggttcgaat gaagatctaa atccaaattt ttttctggca tgtctggata tctgct
//
LOCUS       XM_071886220            3362 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like protease
            SBT6.1 (LOC139904279), mRNA.
ACCESSION   XM_071886220
VERSION     XM_071886220.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3362
                     /gene="LOC139904279"
                     /note="subtilisin-like protease SBT6.1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904279"
     CDS             96..3203
                     /gene="LOC139904279"
                     /codon_start=1
                     /product="subtilisin-like protease SBT6.1"
                     /protein_id="XP_071742321.1"
                     /db_xref="GeneID:139904279"
                     /translation="MNIPKFKVTIFSFSLITLLISVLLVHFTKPPNYNQTLTSNSPPQ
                     LARTNYIVRFIEYKHAQHHKQYLEHNTNKKFKTWQWIHRNNPASKFPTDFGVIAIDND
                     AMNSIIKEFEKLELVKDVRVDSSYQLRNLLGGNEKQKEERIGAFSDGKKRPGKIFTSI
                     SFGENEDANQTIELKRQLLADRSQVTSLFGADALWSKGYTGAKVKMAIFDTGIRSDHP
                     HFRNIKERTNWTNEDTLNDNLGHGTFVAGVIASENAECLGFAPDTEIYAFRVFTDAQV
                     SYTSWFLDAFNYAIASEMDVLNLSIGGPDYLDLPFVEKVLELTASNIIMVSAIGNDGP
                     LYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIM
                     GSKISTGCKTLSGTSVASPVVAGVVCLLVSVVPESDRKQILNPASMKQALVEGAAKLS
                     GPNMYEQGAGRVDLLESYEILKSYKPRASIFPSVLDYTDCPYSWPFCKQPLYADAMPV
                     LFNTTVLNGMGVIGYVESRPVWHPSNEESNLLSIHFTYSDVIWPWTGYLALHMQIKEE
                     GAQFEGEIEGNVTVKIYSPPGLGEKSFRHSTCVLQLKLKVIPTPPRSMRILWDQFHSI
                     KYPPGYIPRDSLDVRNDILDWHGDHLHTNYHIMFNMLRDAGYYIETLGSPLTCFDARE
                     YGTLMLVDLEDEYFEEEIQKLRDDVVNTGLSLIVFADWYNVDTMVKMRFFDDNTRSWW
                     TPVTGGANVPALNDLLAPFGIAFGDKILNGDFNLNDELIRYASGTNIAKFPGGGYVHR
                     FPFYDSSESGATHSFLTSGSDNAYSAILGLVEVGGSRIAVYGDSNCLDSSHMVTNCYW
                     LLRKMLEFTGRNMKDPILFSYSVKQKTSLHQDDHQLPSRRTDLNFSTYSSVAGKELMC
                     GSDSRFDVWGTKGYGLHVRGRNRRLPGYKAIDLGRGLNSSSSFDVSSGLKTHEKNTEG
                     NSNRFLGLLYGDDLDAPFVFPSHWLVPAAAVVLGILVMINFWRIRQKRRRRRKGSTSN
                     RYTNV"
     misc_feature    678..1448
                     /gene="LOC139904279"
                     /note="Peptidase S8 family domain in SKI-1-like proteins;
                     Region: Peptidases_S8_SKI-1_like; cd07479"
                     /db_xref="CDD:173805"
     misc_feature    order(723..725,816..818,939..941,996..998,1086..1088,
                     1314..1316)
                     /gene="LOC139904279"
                     /note="active site"
                     /db_xref="CDD:173805"
     misc_feature    order(723..725,816..818,1314..1316)
                     /gene="LOC139904279"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173805"
ORIGIN      
        1 aaaaagcttc atccacagat tcaccccatc tttccgattc cgatgagcga tcttctttgc
       61 gatcacttca accgatcccc ggctgcaaaa caacaatgaa tatacccaaa ttcaaagtca
      121 ctattttcag tttctcatta attacccttt taatttcagt cttactcgtt cacttcacaa
      181 aacccccaaa ttacaaccaa accctaacct ccaattcacc gccgcagtta gctcgaacga
      241 attacatagt tagattcatt gaatacaaac acgctcaaca ccataaacag taccttgaac
      301 acaacacaaa caaaaagttc aaaacttggc aatggattca cagaaacaac ccggcttcta
      361 aatttccgac tgatttcggt gtcattgcga ttgataatga cgctatgaat tcaattatta
      421 aagaattcga aaagctggaa ttggtaaaag atgttagggt tgattcaagt tatcaattaa
      481 gaaacttgct tggcggaaat gagaaacaga aagaggagcg aatcggagcg ttttcggatg
      541 gaaagaaaag gcctggaaag atctttactt caatttcatt tggtgaaaat gaagatgcta
      601 atcaaacaat tgaactgaaa agacagcttt tagcagatag atcacaagta acatcattgt
      661 ttggggcaga tgcattatgg tcaaagggat atactggtgc gaaagtaaag atggctatat
      721 ttgatactgg aattcgttct gatcatccac attttcggaa tattaaggaa cgcactaatt
      781 ggacgaatga agatacctta aatgataatc ttggacatgg tacatttgtt gccggggtga
      841 ttgcaagtga aaatgctgaa tgtcttggtt tcgcacccga cactgagatt tacgcttttc
      901 gtgtgtttac agatgcgcag gtgtcataca cgtcatggtt tttagacgcg tttaattatg
      961 caatcgcaag cgaaatggat gttttgaact tgagtattgg tggtcctgat tacttggatc
     1021 ttccatttgt agagaaagtt ttggaattga cagcaagcaa tattataatg gtgtctgcaa
     1081 ttggaaacga tggcccgctt tacggtacac tcaataaccc tgcagatcaa agtgatgtta
     1141 tcggtgtcgg tggtatagat tacaatgatc acattgcttc attttcatca cgtggcatga
     1201 gcacttggga gattcctcat ggttatgggc gtgtaaaacc tgatgttgtc gcatatggac
     1261 gagaaattat gggatccaag attagtacgg gttgtaaaac tttatcggga acgagtgtcg
     1321 caagtcctgt agttgctggt gtagtgtgtc tacttgtgag tgtcgttcct gaaagtgatc
     1381 gaaaacaaat cttgaatccg gcaagcatga aacaagccct agtcgaaggg gctgcaaaac
     1441 tttcgggtcc taatatgtat gaacagggtg caggccgggt tgatctgtta gaatcatatg
     1501 agattttgaa gagctacaag ccacgagcaa gcatcttccc tagtgttctt gattataccg
     1561 attgtcctta ttcatggccg ttttgcaaac aacctttgta tgcggatgca atgccggtac
     1621 ttttcaacac gactgtctta aacggaatgg gtgtaatcgg gtatgttgaa agccgacccg
     1681 tttggcatcc ttcaaatgag gaaagtaatc ttttaagtat tcatttcact tattcggacg
     1741 ttatttggcc ttggaccggt tatcttgcac tccacatgca aatcaaagaa gaaggggccc
     1801 aatttgaagg cgaaattgaa ggaaacgtaa ccgttaaaat atatagtccg cccggtttag
     1861 gcgaaaagtc atttcgacat agtacatgtg tgcttcagtt aaagttaaaa gtgattccta
     1921 caccaccaag atcaatgcga attttgtggg accagtttca tagtattaaa tacccgcccg
     1981 gttacatccc acgagactcg ttagatgttc gtaacgacat tcttgattgg catggggacc
     2041 acttgcatac taattaccat atcatgttta atatgttaag agacgcggga tattatatcg
     2101 aaacactcgg ttccccattg acgtgttttg atgctcgtga atacgggact cttatgttag
     2161 tagatcttga agatgagtat tttgaagaag agattcaaaa gttgagggat gatgttgtaa
     2221 atactggact tagtttgatt gtttttgctg attggtataa tgttgacaca atggttaaaa
     2281 tgaggttttt cgatgataat acgcgaagct ggtggacccc ggttacgggt ggtgctaacg
     2341 ttcctgcttt gaatgatctt ttggcaccgt ttggtatcgc gtttggagat aagattttaa
     2401 atggtgattt taacttgaat gatgagttga ttagatacgc gtcgggtacc aatattgcta
     2461 aattccccgg gggtgggtac gtgcataggt tcccgtttta tgacagctct gaaagtgggg
     2521 ccacacatag tttcctaaca tccggctcag ataatgcata ttcggcgatt ctagggttag
     2581 tagaagtggg aggaagtcga atagcggtat acggagattc aaactgttta gatagcagcc
     2641 atatggttac caactgttac tggcttttaa gaaaaatgtt agaattcaca ggcagaaata
     2701 tgaaagatcc gatacttttc tcatattcag ttaaacaaaa aacgtcttta catcaagatg
     2761 atcaccagtt accttcacga aggaccgatt tgaatttctc gacttattct tcggtggccg
     2821 gaaaggaatt gatgtgcggg agtgattcac ggtttgatgt ttggggaaca aaagggtatg
     2881 gattacatgt tagaggacgg aatcgaagat taccgggtta taaagccatt gatcttggta
     2941 ggggattaaa ttcttcttct tcgtttgatg tctcctcggg tttgaaaact cacgagaaaa
     3001 atacagaggg taatagtaat agatttctcg gcttgctgta cggagacgat ctggatgcac
     3061 cgtttgtgtt cccgagtcac tggcttgttc ctgctgctgc tgttgtttta gggattttag
     3121 tgatgataaa tttctggagg atcagacaaa agaggcgtcg aagaaggaaa gggtcaacgt
     3181 ctaaccgcta tactaacgtc tagctaggga tcaattttga gttaaaattt gaagattgtg
     3241 tgtaatacta gttcaaaatc ccagaggcta gttagagttt ttgcatttgc ataaaaaaat
     3301 agtagaaact agttactata agcattttta tatgatgcaa attattatat gaaattttgg
     3361 ca
//
LOCUS       XM_071886221            1316 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904280), mRNA.
ACCESSION   XM_071886221
VERSION     XM_071886221.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1316
                     /gene="LOC139904280"
                     /note="uncharacterized LOC139904280; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904280"
     CDS             199..1137
                     /gene="LOC139904280"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742322.1"
                     /db_xref="GeneID:139904280"
                     /translation="MYGSSGNQRSTTTGTVDDLMREVTHMMNNPDYEREMVRNNPHLR
                     ELVHGNPENFRNIVNDPALDPQIREIMTNPDLFRQTVSNLRAAPPQNQAAQNPATATT
                     GGALETTAVDTGIALKPTVSLNVRVLNGPSFTVKASLEASVRLFKSVLEKHCDVPAGE
                     QRLVHKGRIFYEEESTLKSYGLKADDTVHLVRGTGGLGWFQRTPSPLLGRRAHIIQAM
                     HDSNPQFKAMVRSPEFNRMFPPSMNIEQTMTLQETAFAMFTRGPVPPEEKYVTQLAQV
                     EEMGFTNARDSLDALTAHSGNVYAAVELLEILSKYH"
     misc_feature    559..780
                     /gene="LOC139904280"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
     misc_feature    1003..1113
                     /gene="LOC139904280"
                     /note="UBA domain-like superfamily; Region: UBA_like_SF;
                     cl21463"
                     /db_xref="CDD:473871"
     polyA_site      1316
                     /gene="LOC139904280"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tccatcccaa taaacaaacc gtccaaattc caggtcacaa taaaaaaccg attcaattaa
       61 atctattcaa cccttgtaac cctagctagg gttttcaagg cgaacatcca cagatcaacc
      121 acgattgcag tattttcggt ttcatttctg tttccccggc cttcaattca acttccacgt
      181 caaaatcctc gcacagccat gtacggatcg agcggtaatc agaggagtac aactactggt
      241 acggttgatg acttgatgcg tgaagtcact catatgatga acaaccctga ttatgagcgt
      301 gagatggtga ggaataaccc tcatttgcgt gaattggtcc atgggaatcc agaaaacttt
      361 cgcaatatcg tcaacgatcc cgccctcgat ccacaaataa gggagattat gacaaaccca
      421 gatctcttca ggcaaacggt cagtaacctg cgtgctgcgc ctcctcaaaa ccaggccgct
      481 cagaaccctg caaccgcaac cactggtggt gctctggaga caactgctgt tgatacaggt
      541 attgccttga agcctaccgt ctctctaaat gtacgggttt taaatggccc gagtttcact
      601 gttaaggcga gtctcgaggc gtctgtccgg ttgttcaagt ctgttcttga aaaacactgt
      661 gacgtgccag ctggagagca gaggctggtt cataaaggac gtatttttta tgaagaggag
      721 agtactttaa aaagctatgg tttgaaggcc gacgacaccg ttcacctggt tcgtggtaca
      781 ggtggtttag gctggtttca aaggactccg agcccgttac tcggccgcag agcacatatt
      841 atccaagcca tgcatgattc aaacccccag tttaaagcca tggtgagaag tcctgagttc
      901 aaccgtatgt ttcccccgtc catgaacatt gagcaaacaa tgacgctaca agaaactgct
      961 ttcgcgatgt tcacaagggg acctgtgcct ccagaggaaa agtatgttac ccaattagca
     1021 caagttgaag aaatgggttt taccaatgct cgtgatagcc ttgatgcact cacagctcac
     1081 tcaggtaatg tttatgctgc cgttgagctg ttagaaatcc tttctaaata tcattaggtc
     1141 tctcatcttc tattgtattg gcggcgactt ggttaatgaa aacttagcta ctgtaattaa
     1201 tggtcggcag tgttcaggat gacttgatta atcatggtgg ttgtgacttt taattagttt
     1261 atgaacctat ggttaccaac tatttgatca tgtacttcca tccatggttt tccgca
//
LOCUS       XM_071886222            1214 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904281), mRNA.
ACCESSION   XM_071886222
VERSION     XM_071886222.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1214
                     /gene="LOC139904281"
                     /note="uncharacterized LOC139904281; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904281"
     CDS             157..1062
                     /gene="LOC139904281"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742323.1"
                     /db_xref="GeneID:139904281"
                     /translation="MYGSRGNRRSTTTHTVDDLMREVTHIMNNPDYERDLVRNNPHLR
                     ELVHGNPENLRNIVNDPGLDPQIRGIMTNPDLFRQTVRNLRAAPPQKQAALETTAADT
                     GIALKPTVSINVRVLNGPSFTVKASLEASVGLFKFLLEKHCDVPAGEQRLVHKGRIFY
                     EEENTLKSYGLKADDTVHLVRGSGSLTWFQRTPSQLFGRRAHIIQAMHDSNPQFEAMV
                     ESPEFKRMFPPSMSMEQTMTMQETAFAMLTRGPVPPEELYATQLAQVEEMGFTNARDN
                     LDALTAHSGNVYAAVELCEILAKYH"
     misc_feature    484..705
                     /gene="LOC139904281"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
     misc_feature    928..1032
                     /gene="LOC139904281"
                     /note="UBA domain-like superfamily; Region: UBA_like_SF;
                     cl21463"
                     /db_xref="CDD:473871"
     polyA_site      1214
                     /gene="LOC139904281"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gataaatctt actatttata tccgcgagcc ccttgaaccc tagttggggt tttcaaggcg
       61 aacatccacc gatcaacacc gattgcagta ttttcggtct catttctgtt tttccagcct
      121 tcaattcaac ttccgcgtca aaattctcgc acagacatgt acggatcgag gggtaatcgg
      181 aggagtacaa ctactcatac ggttgatgac ttgatgcgag aagtcactca tataatgaac
      241 aacccagatt atgagcgtga cttggtgagg aataaccctc atttgcgtga attggtccat
      301 gggaatccag aaaacttgcg caatatcgtc aacgatcccg gcctcgaccc acaaataagg
      361 gggattatga caaaccccga tctcttcagg caaacggtca gaaacctgcg tgctgcgcct
      421 cctcaaaaac aggctgctct ggagactact gctgctgata caggtattgc cttgaagcct
      481 actgtctcta taaatgtacg ggttttaaat ggcccgagtt tcactgttaa ggcgagtctt
      541 gaggcgtctg tcgggttgtt caagtttctt cttgaaaaac actgtgacgt gccagctgga
      601 gagcagaggc tcgttcataa aggacggatt ttttatgaag aggaaaatac tttaaaaagc
      661 tacggtttga aggccgacga caccgttcac ttggttcgtg gttcaggtag tttaacttgg
      721 tttcaacgaa caccgagtca gttattcgga cgcagagccc acatcattca ggcaatgcat
      781 gattcaaatc cccaatttga agctatggtg gaaagtcccg agttcaagcg tatgtttccc
      841 ccgtccatga gcatggagca aacaatgacc atgcaggaga ctgcttttgc aatgcttact
      901 aggggacctg tgcctccaga ggaactatat gctacccaat tagcacaagt tgaagagatg
      961 ggttttacca atgctcgtga taaccttgat gcactcacag ctcactcagg taatgtttat
     1021 gctgcggttg agctctgtga aatccttgct aaatatcatt aggtctctca tcttctgttg
     1081 tattggcgac ttggttaatg aaatttaggt actgtaatta atagtcggca gtgttcagga
     1141 tgactttttt ttatttagat taatcatggt tggttgtgac tttaattagt ttatgaacct
     1201 atggttacca acta
//
LOCUS       XR_011778721             725 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904282), ncRNA.
ACCESSION   XR_011778721
VERSION     XR_011778721.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..725
                     /gene="LOC139904282"
                     /note="uncharacterized LOC139904282; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904282"
     ncRNA           1..725
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904282"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904282"
ORIGIN      
        1 tcgattttta cgatttgtgc atatatgtgg atcaacttta gatccttcaa tgcgttgcaa
       61 gcaagttttg tgaaattcac acgagattta tattttgctc cgttcaattg gagaccttga
      121 tggttgcaca caacatattc gctcaaatgc cgagttcaac tgcaactacc tatttcaaaa
      181 ttgaccatta catttttagc acaatgggtt gagatataca gcattaaact gttgccgatt
      241 caagaaagca taaattcgat tatgcatcat aaccggagga tactaaaagc cagcctgtag
      301 actttgttcc agagagttga cccgttttag tttaaagcac tctgttattg ttctattttt
      361 gaaggtgttc gtcaaatgct caaagctcaa aagtccggat ctacatcaag aagtttcatt
      421 tcaagttcaa gttatatatg ttgttggaat gatgaattga tgtcaaaatg gtttaaagga
      481 gtacaatgag tcattactca gatgcctccc aacatcttct tggaaaacaa taatccttca
      541 ttaatcatta taatttgaag catactactt ccacactgaa gttggcatct gattttgagt
      601 atcaagtgtc aaattgggca atagttccac acttccactt catatatgca gtaaatttaa
      661 aacctgcaat aattttgttg tcacttcaag ttttgtatat aatgttgtat gtacttttca
      721 ttgaa
//
LOCUS       XR_011778722             849 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904283), ncRNA.
ACCESSION   XR_011778722
VERSION     XR_011778722.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..849
                     /gene="LOC139904283"
                     /note="uncharacterized LOC139904283; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904283"
     ncRNA           1..849
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904283"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904283"
ORIGIN      
        1 tgtggactac gtcgagaagg aattgaaaca aagccggatc ccgattgtta aggtccgttg
       61 gaacgccaaa aggggacccg agtttacttg ggaaagagaa gatcaaatgc gaaagaaaca
      121 ccctcatcta ttcccggttc cggaaacgtc agattccgag gaagaaacaa cgaccactac
      181 gcctacctaa atttcgggac gaaatttctt ttaaggtgta ggtaatgtaa catcccgcct
      241 ttttccgtca acttttccgt ttaactattt taaactccgt tatatgttta taacatcttc
      301 cgttaatacg cgtttcaatt atcttgtttt aggtaattta acgcacccga ttgcaacttg
      361 agggacttgt ttcgccaaga caccaaagtg gtgactagcc acttgactag tcaaactctt
      421 ccacctcatt tcttcattta atttttcctt ttcatctaat acttccacca ttctttaaat
      481 tcatcaaaaa gcaattcctc atccaaattc gttcaagaag gattcgatca aaacaaatta
      541 catatttgaa ctcctcgtga tctcctcttc gattccatac cgatttcatc aaatttgggt
      601 cgagactagc attgttcttt gcacgtttac ttgttgaagt actattacac tcttgcaatc
      661 aaaggtcctt gaacttaggt gatgcatgct tccgcacata ctttttgata cttgcattgg
      721 atgtcgagta tattgcatac gtggagcgta ttttggctac tttaaattgt gtcgcatgtg
      781 tttcatacaa actttaacca ttgttatgta ctcgttatgg gaacttcttt tgtaaacatt
      841 gaaacatcc
//
LOCUS       XM_071886223            1999 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxisomal fatty acid
            beta-oxidation multifunctional protein-like (LOC139904284),
            transcript variant X1, mRNA.
ACCESSION   XM_071886223
VERSION     XM_071886223.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1999
                     /gene="LOC139904284"
                     /note="peroxisomal fatty acid beta-oxidation
                     multifunctional protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904284"
     CDS             735..1016
                     /gene="LOC139904284"
                     /codon_start=1
                     /product="peroxisomal fatty acid beta-oxidation
                     multifunctional protein-like"
                     /protein_id="XP_071742324.1"
                     /db_xref="GeneID:139904284"
                     /translation="MVTWVLDYSQFKDLDMVMEAVIESVPLKQKIFSEIDSICPPQFS
                     WRENKILRSSYWGPFIQSGSRNASTGNSQNKKKKSAQVILDLLTVGKVI"
     misc_feature    <738..>857
                     /gene="LOC139904284"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 tttataaaat ttaaggggta aaatatgtta attatatgat acttttgggt tgttaatgaa
       61 aaatctcata aatagatctg agaatgagaa tggtcatctt cttccttttt ttactgcttc
      121 tcttttcagt tcttcttttt caattcctca attttattca agacccagac acaattaaaa
      181 tcaaaactca gacacaatta aaatcaaaac ccaataatcg gcggccatgt ggtgaaaacg
      241 tccgttgcca ctgccagacc cgttgaaaca acccccatta actaataggt acctaaagtt
      301 accgatgttg gtcttaagcc gaagactgtt aagaaagttg ctgtgattgg tggtggccta
      361 atgggctcag ggatagctac tgctttaatc cttggtaata taaagttcat atcaagtttg
      421 ttcttggtat taaagtttgg taaagttgag gggctattat tatacaatct aaaccctaaa
      481 aatttaagaa agaccgcagc cacttgcctc tttaccttct ccggtcaccg gattttacag
      541 gtttcaccgt atctttttca tttgttctct tctttttgat ttgcgtgttc ttcttcctca
      601 tctttactcg attccggcat catctaagtt atccgacacc gttaaattgt gtttgacatc
      661 cgttgaccgg cggttgaccg ggtttggttg caaggaagaa gttagcaccg gcccaagctg
      721 aaagggtttt atcgatggtt acttgggtat tagactactc acagttcaaa gatctagata
      781 tggttatgga ggctgttatt gagagtgttc cattaaagca aaagatattt agtgaaatcg
      841 acagcatctg tccacctcaa tttagttgga gagaaaataa aattttaaga tcgagttatt
      901 ggggcccatt tattcagtcc ggctcacgta atgcctctac tggaaatagt cagaacaaaa
      961 aaaaaaagtc tgcacaagtg atattagacc tgttgacagt cggaaaagtt atctaaaaat
     1021 cacctgttgt ggtcggaaat tgtaccagtt ttgcggttaa ccgcaccttt tcttcgtaca
     1081 ctcaagttgc acaaattttg cttcatttgg atgtcgattt gttcagaatt gaccgaatta
     1141 taaccacctt tggactcccc tatgggcccg ttccagttcc aggatttagc tgaatatggt
     1201 gtggctgttg ctttaagtaa agatatttat accgcttttc ctgatcgaac attccgatct
     1261 ccgataggtg accttctact gaaaagtgga cgaaatggta atttctttca gtatttcatg
     1321 atttagtaat tcgttttttt ggttaacact agactgttgt ctcaagtaaa aataatggaa
     1381 aaggatatta tatttacgct aatggtaaca agccgaaagc cgatcccgaa gttttgccca
     1441 cctttgagga gtctagaaga ctagtcaaca tgatgcctgg aaggaagcat atatcggtta
     1501 gcgaccaaga aatagtagag atggtaatgt ttctggtggt gaacgaggat tgtcgggttc
     1561 tcgaggaaga agttgtggtt agggcatcgg attaatctat acaagatcac aacccctaga
     1621 ccgaatgatg aaaccgacga acagaaaaac agagagatag actttttact gtaactagat
     1681 attaaatgag aacactctct actaccaatt agatatttag taacaaagat tacctctagt
     1741 cttatgctcc tcgactcgtg gttagagaaa cgacttctct tctattctaa ggtattctaa
     1801 ggtagaggaa gaattgtcta catctcacgt ccccatacct cgcatgtgtg agattggtta
     1861 tttttgttgt tgttgttgtt gtcgtcgtct agtcttaagc ctcctttctc aaacatatga
     1921 atccataatc tccgataatc cccactccac caccacctca gcaccccaaa cacctgaaat
     1981 taatatatat atatatata
//
LOCUS       XM_071886224            1930 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxisomal fatty acid
            beta-oxidation multifunctional protein-like (LOC139904284),
            transcript variant X2, mRNA.
ACCESSION   XM_071886224
VERSION     XM_071886224.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1930
                     /gene="LOC139904284"
                     /note="peroxisomal fatty acid beta-oxidation
                     multifunctional protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904284"
     CDS             735..1016
                     /gene="LOC139904284"
                     /codon_start=1
                     /product="peroxisomal fatty acid beta-oxidation
                     multifunctional protein-like"
                     /protein_id="XP_071742325.1"
                     /db_xref="GeneID:139904284"
                     /translation="MVTWVLDYSQFKDLDMVMEAVIESVPLKQKIFSEIDSICPPQFS
                     WRENKILRSSYWGPFIQSGSRNASTGNSQNKKKKSAQVILDLLTVGKVI"
     misc_feature    <738..>857
                     /gene="LOC139904284"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 tttataaaat ttaaggggta aaatatgtta attatatgat acttttgggt tgttaatgaa
       61 aaatctcata aatagatctg agaatgagaa tggtcatctt cttccttttt ttactgcttc
      121 tcttttcagt tcttcttttt caattcctca attttattca agacccagac acaattaaaa
      181 tcaaaactca gacacaatta aaatcaaaac ccaataatcg gcggccatgt ggtgaaaacg
      241 tccgttgcca ctgccagacc cgttgaaaca acccccatta actaataggt acctaaagtt
      301 accgatgttg gtcttaagcc gaagactgtt aagaaagttg ctgtgattgg tggtggccta
      361 atgggctcag ggatagctac tgctttaatc cttggtaata taaagttcat atcaagtttg
      421 ttcttggtat taaagtttgg taaagttgag gggctattat tatacaatct aaaccctaaa
      481 aatttaagaa agaccgcagc cacttgcctc tttaccttct ccggtcaccg gattttacag
      541 gtttcaccgt atctttttca tttgttctct tctttttgat ttgcgtgttc ttcttcctca
      601 tctttactcg attccggcat catctaagtt atccgacacc gttaaattgt gtttgacatc
      661 cgttgaccgg cggttgaccg ggtttggttg caaggaagaa gttagcaccg gcccaagctg
      721 aaagggtttt atcgatggtt acttgggtat tagactactc acagttcaaa gatctagata
      781 tggttatgga ggctgttatt gagagtgttc cattaaagca aaagatattt agtgaaatcg
      841 acagcatctg tccacctcaa tttagttgga gagaaaataa aattttaaga tcgagttatt
      901 ggggcccatt tattcagtcc ggctcacgta atgcctctac tggaaatagt cagaacaaaa
      961 aaaaaaagtc tgcacaagtg atattagacc tgttgacagt cggaaaagtt atctaaaaat
     1021 cacctgttgt ggtcggaaat tgtaccagtt ttgcggttaa ccgcaccttt tcttcgtaca
     1081 ctcaagttgc acaaattttg cttcatttgg atgtcgattt gttcagaatt gaccgaatta
     1141 taaccacctt tggactcccc tatgggcccg ttccagttcc aggatttagc tgaatatggt
     1201 gtggctgttg ctttaagtaa agatatttat accgcttttc ctgatcgaac attccgatct
     1261 ccgataggtg accttctact gaaaagtgga cgaaatgtaa aaataatgga aaaggatatt
     1321 atatttacgc taatggtaac aagccgaaag ccgatcccga agttttgccc acctttgagg
     1381 agtctagaag actagtcaac atgatgcctg gaaggaagca tatatcggtt agcgaccaag
     1441 aaatagtaga gatggtaatg tttctggtgg tgaacgagga ttgtcgggtt ctcgaggaag
     1501 aagttgtggt tagggcatcg gattaatcta tacaagatca caacccctag accgaatgat
     1561 gaaaccgacg aacagaaaaa cagagagata gactttttac tgtaactaga tattaaatga
     1621 gaacactctc tactaccaat tagatattta gtaacaaaga ttacctctag tcttatgctc
     1681 ctcgactcgt ggttagagaa acgacttctc ttctattcta aggtattcta aggtagagga
     1741 agaattgtct acatctcacg tccccatacc tcgcatgtgt gagattggtt atttttgttg
     1801 ttgttgttgt tgtcgtcgtc tagtcttaag cctcctttct caaacatatg aatccataat
     1861 ctccgataat ccccactcca ccaccacctc agcaccccaa acacctgaaa ttaatatata
     1921 tatatatata
//
LOCUS       XR_011778723            2707 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear intron maturase 2,
            mitochondrial (LOC139904285), transcript variant X1, misc_RNA.
ACCESSION   XR_011778723
VERSION     XR_011778723.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2707
                     /gene="LOC139904285"
                     /note="nuclear intron maturase 2, mitochondrial; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139904285"
     misc_RNA        1..2707
                     /gene="LOC139904285"
                     /product="nuclear intron maturase 2, mitochondrial,
                     transcript variant X1"
                     /db_xref="GeneID:139904285"
ORIGIN      
        1 caaataagat ttatcaaaag cacgttcatg ttcatttttc aattcgatac actaatctga
       61 gctgacctct tctcactgcc accacaatcg ctgcttttct caggtaagat gaataggtgt
      121 tttagcattt tcagtgattc aatacttatt aaatcgataa tcagcataaa ccctaaaaac
      181 agaaatgggt tttctgtatt taaatcattt atgtacactt caacaaagta caacaattac
      241 caaaacaaat tcagtagggt taatgttgac ccaaatgacc catcaaccct aatgaaagaa
      301 gacggtgtat ctgtatgttc agagttatgg attgatagtt ttcgaaaccc taatcaaact
      361 gttactaatt taactaatta tttaagaaga tttgagttat gggttttagc atatcagaaa
      421 gtttgtgctg atgaaatggg ttcttatatg cctaaaagtt ctgtacaaag attagcactt
      481 gatgatttat tagcacttag gaatgctgtt cttgataacc ggtttcgatg gggtgctcgg
      541 ttagagtttt ttataaaatc ccccaaagat aaaaccgagt acgaatcttt atcaaaaagg
      601 aaaattaggg ctatcttgac tacaacacaa cctagcccgt ttcaagatag gattgttcaa
      661 gaggttttgt ttatgatttt ggagcctgtt tatgaaggga gattttcgga caagtcgtat
      721 gcttttagac caggtaggac tgcgcatacg gcgttaaggg ttgttaggag gagttttgca
      781 gggtatttgt ggtatataaa aggggatttg agtacagttt tggacgggtt aaaagttggt
      841 atggtgatta gtgctttaat gagagatgtt agagataaaa tggtgattga tttggtgaaa
      901 tcggctatga ctactcccgt tattactagc ccgcccgttg agaaaaagag aaccaaaagg
      961 aagtatcaga aaaaacgggt tttggctgaa gacgagccga aacccgaccc gtattggttg
     1021 gaatcttttt tcgggtttgc acctgaagaa gctcaaaagg ttccgacttg gggacattgt
     1081 gggattttaa gcccgttgtt ggctaatatt tgtttagacg aattggaccg ttggatggaa
     1141 ggtaaaatta aagagtttta caaaccttca aagagtgatg tgatatggaa tagtcccgaa
     1201 ggagaagttg accaaggcaa tacgtcttgg cccgaattcg ttcccactag tgggcccgat
     1261 aagactagga aaatcgatta tattcgtttt ggtggtcatt tcttgattgg ggtccgtggt
     1321 cctagagccg atgctgctat tcttagaaaa caattaatcg aattttgtga tcaaaaatat
     1381 aatcttaaac tagacaacga aagtctaccg attgaacata taacgaaagg tattatgttt
     1441 cttgatcatg ttttgtgtag aagagttgta tacccaactc ttagatatac tgcaacgggt
     1501 ggtaaaatta tcagtgaaaa gggcgttggt actttattat cggtcactgc gagcttaaaa
     1561 caatgcatta aacagtttag aaagttggga tttttaaagg gtgatagaga tccggaccca
     1621 cagccctgtt ttagaatgtt tcatgccacg caagcgcata ctaatgcgca aatgaacaag
     1681 cttttgtcta caatggttga atggtacaga tttgctgata accgaaaaaa gattgtgaat
     1741 ttttgttctt atattataag gggttctctt gcaaaacttt atgctgcaaa atataagctt
     1801 cggtcacgtg ctaaagttta taaaattggt gacaggacac ttcgacgtcc attaaaggag
     1861 aaaaagggac agtcacccga gtataataat ttgttaagaa tgggtcttgc tgaatcgatt
     1921 gaagggcttc agtatacacg aatgtcattg gtgcccgaaa ctgattacag cccgtttcct
     1981 gttgggtgga ggcctgatca cgagaaggcg ttacttgaat atataagatt ggatgatcca
     2041 aaaacatttg aacaaaatcg tacaacttta attgaagaag gtcttatatc acctcaagat
     2101 tatgtgtcga tgcttgtttg gaattataag agaagtgcag ccattaatgg tgtgaataat
     2161 tcggaggaag gtaaagcgtt gatgctggga tcgggtgttc aaagcgatga gcaaagtgta
     2221 gaagatgagg aaaagaacga agaaaagtta cgtgctacaa acgtttgagg tttgactttt
     2281 tgcttgactt tcatggtgga atgtttgact aaagctatta ggagcaaaaa gtggaccatt
     2341 tgtgttcctt ctttggctca catagaaatt ccgtaagctg tcaaagatat tgtttctcgt
     2401 atcctagatc ttctccttca agaaatggat tcatgttgac cttacggaag atggtgacgc
     2461 tactgtcgat gaaaccaaaa cttaaaccaa cagctgttga ccttacacaa gattgcaatt
     2521 tgttgatgta tctgaggttt gactttaaaa agtcaaacaa ggctgagata atacgatcct
     2581 cctactactt gaagttgtta ctggttttgg aaatagtcat ttgttcctgc atgtggattg
     2641 taacaagttc ttgtaagaaa tgtttgtatg tacagaaact gttcttggat gatcattttg
     2701 taccata
//
LOCUS       XM_071886225            2743 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear intron maturase 2,
            mitochondrial (LOC139904285), transcript variant X2, mRNA.
ACCESSION   XM_071886225
VERSION     XM_071886225.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2743
                     /gene="LOC139904285"
                     /note="nuclear intron maturase 2, mitochondrial; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139904285"
     CDS             109..2268
                     /gene="LOC139904285"
                     /codon_start=1
                     /product="nuclear intron maturase 2, mitochondrial"
                     /protein_id="XP_071742326.1"
                     /db_xref="GeneID:139904285"
                     /translation="MNRCFSIFSDSILIKSIISINPKNRNGFSVFKSFMYTSTKYNNY
                     QNKFSRVNVDPNDPSTLMKEDGVSVCSELWIDSFRNPNQTVTNLTNYLRRFELWVLAY
                     QKVCADEMGSYMPKSSVQRLALDDLLALRNAVLDNRFRWGARLEFFIKSPKDKTEYES
                     LSKRKIRAILTTTQPSPFQDRIVQEVLFMILEPVYEGRFSDKSYAFRPGRTAHTALRV
                     VRRSFAGYLWYIKGDLSTVLDGLKVGMVISALMRDVRDKMVIDLVKSAMTTPVITSPP
                     VEKKRTKRKYQKKRVLAEDEPKPDPYWLESFFGFAPEEAQKVPTWGHCGILSPLLANI
                     CLDELDRWMEGKIKEFYKPSKSDVIWNSPEGEVDQGNTSWPEFVPTSGPDKTRKIDYI
                     RFGGHFLIGVRGPRADAAILRKQLIEFCDQKYNLKLDNESLPIEHITKGIMFLDHVLC
                     RRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKQCIKQFRKLGFLKGDRDPDPQPCF
                     RMFHATQAHTNAQMNKLLSTMVEWYRFADNRKKIVNFCSYIIRGSLAKLYAAKYKLRS
                     RAKVYKIGDRTLRRPLKEKKGQSPEYNNLLRMGLAESIEGLQYTRMSLVPETDYSPFP
                     VGWRPDHEKALLEYIRLDDPKTFEQNRTTLIEEGLISPQDYVSMLVWNYKRSAAINGV
                     NNSEEGKALMLGSGVQSDEQSVEDEEKNEEKLRATNV"
     misc_feature    634..1455
                     /gene="LOC139904285"
                     /note="Reverse transcriptases (RTs) with group II intron
                     origin. RT transcribes DNA using RNA as template. Proteins
                     in this subfamily are found in bacterial and mitochondrial
                     group II introns. Their most probable ancestor was a
                     retrotransposable element with...; Region: RT_G2_intron;
                     cd01651"
                     /db_xref="CDD:238828"
     misc_feature    order(805..822,1066..1071,1288..1290,1294..1299,
                     1441..1446)
                     /gene="LOC139904285"
                     /note="putative active site [active]"
                     /db_xref="CDD:238828"
     misc_feature    order(805..822,1066..1068,1294..1296)
                     /gene="LOC139904285"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238828"
     misc_feature    1069..1071
                     /gene="LOC139904285"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238828"
     misc_feature    1531..>1824
                     /gene="LOC139904285"
                     /note="Type II intron maturase; Region: Intron_maturas2;
                     pfam01348"
                     /db_xref="CDD:279664"
ORIGIN      
        1 caaataagat ttatcaaaag cacgttcatg ttcatttttc aattcgatac actaatctga
       61 gctgacctct tctcactgcc accacaatcg ctgcttttct caggtaagat gaataggtgt
      121 tttagcattt tcagtgattc aatacttatt aaatcgataa tcagcataaa ccctaaaaac
      181 agaaatgggt tttctgtatt taaatcattt atgtacactt caacaaagta caacaattac
      241 caaaacaaat tcagtagggt taatgttgac ccaaatgacc catcaaccct aatgaaagaa
      301 gacggtgtat ctgtatgttc agagttatgg attgatagtt ttcgaaaccc taatcaaact
      361 gttactaatt taactaatta tttaagaaga tttgagttat gggttttagc atatcagaaa
      421 gtttgtgctg atgaaatggg ttcttatatg cctaaaagtt ctgtacaaag attagcactt
      481 gatgatttat tagcacttag gaatgctgtt cttgataacc ggtttcgatg gggtgctcgg
      541 ttagagtttt ttataaaatc ccccaaagat aaaaccgagt acgaatcttt atcaaaaagg
      601 aaaattaggg ctatcttgac tacaacacaa cctagcccgt ttcaagatag gattgttcaa
      661 gaggttttgt ttatgatttt ggagcctgtt tatgaaggga gattttcgga caagtcgtat
      721 gcttttagac caggtaggac tgcgcatacg gcgttaaggg ttgttaggag gagttttgca
      781 gggtatttgt ggtatataaa aggggatttg agtacagttt tggacgggtt aaaagttggt
      841 atggtgatta gtgctttaat gagagatgtt agagataaaa tggtgattga tttggtgaaa
      901 tcggctatga ctactcccgt tattactagc ccgcccgttg agaaaaagag aaccaaaagg
      961 aagtatcaga aaaaacgggt tttggctgaa gacgagccga aacccgaccc gtattggttg
     1021 gaatcttttt tcgggtttgc acctgaagaa gctcaaaagg ttccgacttg gggacattgt
     1081 gggattttaa gcccgttgtt ggctaatatt tgtttagacg aattggaccg ttggatggaa
     1141 ggtaaaatta aagagtttta caaaccttca aagagtgatg tgatatggaa tagtcccgaa
     1201 ggagaagttg accaaggcaa tacgtcttgg cccgaattcg ttcccactag tgggcccgat
     1261 aagactagga aaatcgatta tattcgtttt ggtggtcatt tcttgattgg ggtccgtggt
     1321 cctagagccg atgctgctat tcttagaaaa caattaatcg aattttgtga tcaaaaatat
     1381 aatcttaaac tagacaacga aagtctaccg attgaacata taacgaaagg tattatgttt
     1441 cttgatcatg ttttgtgtag aagagttgta tacccaactc ttagatatac tgcaacgggt
     1501 ggtaaaatta tcagtgaaaa gggcgttggt actttattat cggtcactgc gagcttaaaa
     1561 caatgcatta aacagtttag aaagttggga tttttaaagg gtgatagaga tccggaccca
     1621 cagccctgtt ttagaatgtt tcatgccacg caagcgcata ctaatgcgca aatgaacaag
     1681 cttttgtcta caatggttga atggtacaga tttgctgata accgaaaaaa gattgtgaat
     1741 ttttgttctt atattataag gggttctctt gcaaaacttt atgctgcaaa atataagctt
     1801 cggtcacgtg ctaaagttta taaaattggt gacaggacac ttcgacgtcc attaaaggag
     1861 aaaaagggac agtcacccga gtataataat ttgttaagaa tgggtcttgc tgaatcgatt
     1921 gaagggcttc agtatacacg aatgtcattg gtgcccgaaa ctgattacag cccgtttcct
     1981 gttgggtgga ggcctgatca cgagaaggcg ttacttgaat atataagatt ggatgatcca
     2041 aaaacatttg aacaaaatcg tacaacttta attgaagaag gtcttatatc acctcaagat
     2101 tatgtgtcga tgcttgtttg gaattataag agaagtgcag ccattaatgg tgtgaataat
     2161 tcggaggaag gtaaagcgtt gatgctggga tcgggtgttc aaagcgatga gcaaagtgta
     2221 gaagatgagg aaaagaacga agaaaagtta cgtgctacaa acgtttgaga tgactaagtt
     2281 ctttaacaag ggctgcatcc ttcagccagt attccattgc accgtcagca ttgtgtgacc
     2341 gcctgaactg gagctttcca cctggtgcca ccttgtttgc cacatgcttc agaaagtggt
     2401 ccaagagccc agtgtcacct atcctctttc ttgtttcaac tctaagcgct ggcctagtaa
     2461 tcggattgct gatcgttact ttcttttcct gcattgattc tagaagactt aactctgcag
     2521 ccatgtacct gcagttaatt aattcaattc gattgttaat gattaatagt taatacaaaa
     2581 ttgcatccca ttatttgtaa aaataattga agtttttcta cctatctttt gacaacctat
     2641 cagttggatt catgattact actttcatgc atttcttcat aggcttctta ttaacttggc
     2701 gccatacatg cttcacttgt ttaaccttct tttttttccc tca
//
LOCUS       XM_071886226             674 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904286), mRNA.
ACCESSION   XM_071886226
VERSION     XM_071886226.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..674
                     /gene="LOC139904286"
                     /note="uncharacterized LOC139904286; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904286"
     CDS             60..374
                     /gene="LOC139904286"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742327.1"
                     /db_xref="GeneID:139904286"
                     /translation="MAYSSRAVSRLCSRFQSLSPKFNTSNKNFVSLSTDSSSPSFFKF
                     TSNPQISSSFRRTSRLPVELSALITMLPLHSATASSCLKSGLSLESQSWGLVPQGISM
                     PL"
     polyA_site      674
                     /gene="LOC139904286"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttgattgatt ttatgtattg accaatttag ggttttgatt agggtttttt ttgttcatca
       61 tggcctactc ttctagggct gtttcaaggt tatgttctcg atttcaatct ttatccccca
      121 aattcaatac tagtaataaa aactttgtat ctctatcaac tgattcatca tctccatcat
      181 tcttcaaatt tacctcaaac ccccaaattt cttcctcatt tcgccgtact tcaagattac
      241 cagtggaatt aagcgcgttg ataacgatgt tgccattgca tagtgcaact gcttcatcat
      301 gtttaaaatc gggattgtcg ttagagtctc aaagctgggg attagtccct caaggcattt
      361 caatgccttt atgacattgt tttggctaat tacatcaagg ggaagtttac atgaatagaa
      421 acataggcta aacaagtttc ttattttgac atgtaatgct actttggata ctcaaaatta
      481 ttcaagtctt gcaaaagatc atatttgatc tgtgttttaa atcttttgtc tagtgtttgc
      541 ccttcaaaat caattgtacg cagttctttg cgaaataaaa tgtcaagttg tcgaatggat
      601 attgataaaa ccatgctgct agtcatgttt tactttcata ttggtactta tatatgagaa
      661 gggtgaattt ccaa
//
LOCUS       XM_071886227            2443 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxisomal fatty acid
            beta-oxidation multifunctional protein AIM1-like (LOC139904287),
            mRNA.
ACCESSION   XM_071886227
VERSION     XM_071886227.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2443
                     /gene="LOC139904287"
                     /note="peroxisomal fatty acid beta-oxidation
                     multifunctional protein AIM1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139904287"
     CDS             108..2282
                     /gene="LOC139904287"
                     /codon_start=1
                     /product="peroxisomal fatty acid beta-oxidation
                     multifunctional protein AIM1-like"
                     /protein_id="XP_071742328.1"
                     /db_xref="GeneID:139904287"
                     /translation="MAEIIVTMEVGSDGVALITISNPPVNALAVPILAGLKDKFAEAM
                     RRDDVKAIVLTGNNGRFSGGFDINVFQIVHKTGDITQLPDVSVALVSNTLEDAKKPIV
                     AAVQGLALGGGLEVAMGCHARVAAPRAQLGLPELSLGVMPGFGGTQRLPRLLGLSKAI
                     DMMLTSKPILSEEGAKLGLIDAIVPPQDLLQVSRQWALDIAEGRKPWVRSLHRTDKIG
                     SLSEAREIIRNARQLVKLTAPNMPQHQACLDVIEEGIVHGGYVGVLKEVETFNKLVLS
                     DTAKGLVHIFFAQRAISKVPKVTDVGLKPRTVKKVAVIGGGLMGSGIATALILGNINV
                     VLKEVNSDYLQKGIKTIEGNVRGLVARKKLAPAQAEKALSMVTGVLDYSQFKDVDMVI
                     EAVIENVPLKQKIFSEIESICPPHCILATNTSTIDLNLVGEKIKSQDRVIGAHFFSPA
                     HVMPLLEIVRTEKTSAQAILDLMNVGKIIKKSPVVVGNCTGFAVNRTFFPYTQGAHIL
                     LHLGVDLFRIDRLITSFGLPMGPFQLQDLAGYGVAVAVGKEFANAFPDRTFRSPIVDL
                     LIKSGRNGKNNGKGYYIYAKGSKPIPDPQVLPIIEESSRLVNMMPGGKPISVTDQEIV
                     EMVLFPVVNEACRVLEEGVVVRASDLDVASVLGMSFPSYRGGIVFWGDLVGAKHIYAS
                     LKKWSEKYGNFYKPSRFLEERAKNGVPLSAPLTTSASSRARL"
     misc_feature    126..2234
                     /gene="LOC139904287"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     Region: fadJ; PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 cttctgttct atataacaac cgtgatcgtc ttctcataca tactctcttt cattgacttc
       61 cagagactca ctttttgttt gtccgctgaa gaaaaaagta atcaaaaatg gcagaaataa
      121 ttgtcaccat ggaagtcggt tctgatgggg ttgctttgat caccatctct aatccccctg
      181 ttaatgcttt agctgtacca attcttgctg ggttgaagga taaatttgct gaggctatga
      241 gaagagatga tgttaaagct attgtgttga ctggtaacaa tgggagattt tctggtggat
      301 tcgacatcaa tgtttttcag atagttcaca aaaccggaga catcactcaa ctacctgatg
      361 tatctgttgc cctcgtgagc aatacacttg aagatgccaa gaaacccata gttgctgctg
      421 tacaaggact tgcactcggg ggaggcctag aagttgcaat gggatgtcat gcgcgtgttg
      481 cagctccaag agctcagctt ggcttgcctg aattatcact tggagtgatg ccaggctttg
      541 gaggtacaca gaggcttcca aggcttttgg ggttgtcaaa ggcaattgat atgatgttga
      601 catcgaaacc gatactctct gaggaagggg cgaaactagg gctcattgat gctattgtgc
      661 ctcctcaaga cttgttgcaa gtgtctaggc aatgggcttt agacatcgca gaaggacgta
      721 aaccgtgggt ccgttccctt catcggacag acaagattgg ttccctttct gaagcacgcg
      781 agattattag aaacgcacga caactagtca aacttacggc tcctaatatg ccacaacatc
      841 aagcatgcct tgatgtgatt gaggaaggca ttgttcacgg aggttatgtt ggcgttttga
      901 aggaggtgga aacgtttaac aagcttgttc tttcggacac ggcgaaaggt cttgttcata
      961 tattctttgc acaacgtgca atctcaaagg tacctaaagt taccgatgtt ggtcttaagc
     1021 cgaggactgt caagaaagtt gctgtgattg gtggaggcct aatgggatca ggaatagcta
     1081 ctgctctaat cctcggtaat ataaatgtcg ttcttaagga agtcaactca gactaccttc
     1141 agaagggaat aaaaacaata gaaggaaatg ttcgaggttt ggttgcaagg aagaagttag
     1201 caccggccca agctgagaag gctttatcga tggttacagg ggtattagac tactcacagt
     1261 ttaaagatgt ggatatggtt atagaggctg ttattgagaa tgttccgttg aagcaaaaga
     1321 tatttagtga aatcgagagc atttgtccac ctcattgcat tttggcaacc aacacgtcta
     1381 ccatcgacct caatttagtt ggagagaaaa ttaaatctca agatcgagtt atcggggccc
     1441 atttcttcag tccagctcat gtgatgcctc tactggaaat agttcgaact gaaaagacgt
     1501 ctgcgcaagc gatattagac cttatgaacg tcggaaaaat cataaagaaa tctcctgttg
     1561 tggtgggaaa ttgtacgggt tttgcggtta accgcacctt ttttccgtac acgcagggtg
     1621 cacacatttt gcttcattta ggtgtcgatt tgttcagaat tgaccgactt atcaccagct
     1681 ttggactccc catgggacca ttccagctgc aggatttagc tggatatggt gtagctgttg
     1741 ctgttggtaa ggaatttgct aatgcttttc ctgatcgcac attccgttct cctatagttg
     1801 accttctaat taaaagtgga cgaaatggta aaaataatgg aaaaggatat tatatttacg
     1861 ccaaaggtag caagccaata cctgatcccc aagttttgcc catcattgag gaatctagca
     1921 gactagtcaa catgatgccc ggagggaagc ctatatctgt tactgaccaa gaaatagtag
     1981 agatggtact gtttcctgtg gtgaatgagg cttgtcgggt tctcgaggaa ggagtcgtgg
     2041 ttcgggcatc agatcttgat gttgcatctg ttcttggaat gagttttcct tcttaccgtg
     2101 gtggtattgt gttctgggga gacttggttg gggcgaaaca catatatgca agtctcaaaa
     2161 aatggtctga aaaatacggc aacttctata agccatcaag atttcttgaa gaaagagcca
     2221 aaaacggcgt cccattgagc gccccattga cgacatctgc aagttcaagg gctcgtctgt
     2281 aagaaattgt ggtgcttcaa tcaaattaca agatggatat tgcatccttc agaataagtt
     2341 tgttgaacct acggtgttat tgagtattgt gtttgttttg tttactatct tttggagtca
     2401 tcctcaacag ttcggaattg aactgtttag ggttgattgg cat
//
LOCUS       XM_071886228             849 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rac-like GTP-binding protein
            ARAC7 (LOC139904289), mRNA.
ACCESSION   XM_071886228
VERSION     XM_071886228.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..849
                     /gene="LOC139904289"
                     /note="rac-like GTP-binding protein ARAC7; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 75 Proteins"
                     /db_xref="GeneID:139904289"
     CDS             93..719
                     /gene="LOC139904289"
                     /codon_start=1
                     /product="rac-like GTP-binding protein ARAC7"
                     /protein_id="XP_071742329.1"
                     /db_xref="GeneID:139904289"
                     /translation="MSASKFIKCVCVGDGAVGKTCMLICYTTNKFPTDYIPTVFDNFS
                     ANVAVDGRIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLMSRASYENVLKKWMP
                     ELRRFAPNVPVVLVGTKLDLRDDKGCLADHMTSDAITYAEGEELRKQIGAVAYIECSS
                     KTQQNVKAVFDTAIKAVLLPPRRNEMTPRQRRSSGCSFAGIICGGCAA"
     misc_feature    108..626
                     /gene="LOC139904289"
                     /note="Rho-related protein from plants (Rop)-like; Region:
                     Rop_like; cd04133"
                     /db_xref="CDD:206705"
     misc_feature    order(114..116,204..209,213..218,222..224,228..230,
                     255..257,267..272,276..284,300..302,309..311)
                     /gene="LOC139904289"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]; other site"
                     /db_xref="CDD:206705"
     misc_feature    129..152
                     /gene="LOC139904289"
                     /note="G1 box; other site"
                     /db_xref="CDD:206705"
     misc_feature    order(138..155,270..275,279..281,447..449,453..455,
                     570..575)
                     /gene="LOC139904289"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206705"
     misc_feature    201..221
                     /gene="LOC139904289"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206705"
     misc_feature    204..206
                     /gene="LOC139904289"
                     /note="G2 box; other site"
                     /db_xref="CDD:206705"
     misc_feature    order(207..209,276..278,300..302,306..308)
                     /gene="LOC139904289"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:206705"
     misc_feature    order(207..212,282..284,300..302)
                     /gene="LOC139904289"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]; other site"
                     /db_xref="CDD:206705"
     misc_feature    order(210..215,300..302,309..311)
                     /gene="LOC139904289"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206705"
     misc_feature    270..281
                     /gene="LOC139904289"
                     /note="G3 box; other site"
                     /db_xref="CDD:206705"
     misc_feature    order(279..284,300..311,324..332)
                     /gene="LOC139904289"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206705"
     misc_feature    444..455
                     /gene="LOC139904289"
                     /note="G4 box; other site"
                     /db_xref="CDD:206705"
     misc_feature    567..575
                     /gene="LOC139904289"
                     /note="G5 box; other site"
                     /db_xref="CDD:206705"
ORIGIN      
        1 tcttttgttt ttcaaacttc ttcttcattt caattcttag tcaacaacca ctgttctttc
       61 gtaatactcg tattattaag ctgaaaagaa agatgagtgc ttcaaagttc ataaaatgtg
      121 tttgtgttgg agatggagct gttggtaaaa catgtatgct catttgttac accactaaca
      181 agttccctac tgactatatt ccaacggtat tcgacaattt cagtgccaat gtagctgtgg
      241 atggaaggat tgtgaatttg ggactttggg atactgctgg tcaagaagat tatagcagat
      301 tgaggcctct aagctataga ggtgcagaca tttttgtgtt ggctttctct ttaatgagta
      361 gagcaagtta tgaaaatgtc ctcaagaagt ggatgcccga gctaaggaga ttcgcaccga
      421 atgttccagt tgtactagtt gggacgaaat tagatctacg tgatgacaag ggatgtttag
      481 cagatcatat gacttcggat gctatcacat acgctgaggg agaggagtta aggaaacaaa
      541 ttggtgcagt tgcttatatc gaatgcagct ccaagactca acagaatgtg aaagcggttt
      601 ttgatacggc gatcaaggct gtgctactac cgccaaggag aaacgaaatg acgccaagac
      661 aaagaagaag ttctggttgc tcattcgcgg ggattatttg tggaggctgt gctgcttagg
      721 aaagattcat ccatggatga atgcaacgtc tcttaaattt gacatcagtt tttgcaacgt
      781 gtttgcattc atttataagg aattatttgt atttttattg tatgccaatt tatatttata
      841 ttattttgt
//
LOCUS       XM_071886229             571 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxiredoxin-2B
            (LOC139904290), mRNA.
ACCESSION   XM_071886229
VERSION     XM_071886229.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..571
                     /gene="LOC139904290"
                     /note="peroxiredoxin-2B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     Proteins"
                     /db_xref="GeneID:139904290"
     CDS             12..500
                     /gene="LOC139904290"
                     /codon_start=1
                     /product="peroxiredoxin-2B"
                     /protein_id="XP_071742330.1"
                     /db_xref="GeneID:139904290"
                     /translation="MAPIAVGDTIPDGTLAYFDEQDQLQTVSVHSLTAGKKVVLFGVP
                     GAFTPTCSMKHVPGFIEKSEELKSKGVEELLLISVNDPFVMKAWKKSYPETKNVKFLA
                     DGSASYTHALGLELDLNEKGLGIRSRRFALLVDNLKVTVANIESGGEFTVSSADEILS
                     AL"
     misc_feature    18..497
                     /gene="LOC139904290"
                     /note="Peroxiredoxin [Posttranslational modification,
                     protein turnover, chaperones]; Region: AHP1; COG0678"
                     /db_xref="CDD:440442"
ORIGIN      
        1 caaaacaaaa aatggccccg atcgcagttg gtgacaccat tccagacgga acacttgctt
       61 acttcgatga acaagatcag ttgcaaactg tgtccgtaca ctctcttacc gccggtaaaa
      121 aagtcgttct ttttggtgtt cccggtgcct ttactcctac ttgcagtatg aagcatgtcc
      181 ctggcttcat tgagaaatcc gaagagctta aatcgaaggg tgttgaggaa cttctgttga
      241 ttagtgtaaa cgacccattt gtgatgaagg cgtggaagaa atcgtaccca gagaccaaaa
      301 atgtgaaatt tcttgctgat gggtctgcaa gctacactca cgcacttgga ctagagcttg
      361 acctcaacga gaaagggctt ggtattaggt caaggaggtt tgctttgtta gtcgataacc
      421 tcaaagtgac agttgctaac attgaatcag gtggagaatt taccgtttcc agtgcagatg
      481 aaatcctatc agccctgtag attttcggct ggtttgctgt aagatcttaa agtttggccc
      541 ttgatgtggg ttctgttcct gtttccaaat c
//
LOCUS       XR_011778724             762 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904292), ncRNA.
ACCESSION   XR_011778724
VERSION     XR_011778724.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..762
                     /gene="LOC139904292"
                     /note="uncharacterized LOC139904292; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904292"
     ncRNA           1..762
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904292"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904292"
ORIGIN      
        1 tttgttgatt tcgtctgttc tggcgatggc aacaatacaa ttattaaaca atggtttatt
       61 caattactgt atccacgaat taaacccttc acgggtgagc gaccgtagaa tcatcttcca
      121 caatcaaagt tcatagcctt cacgattgaa acgccagtgg attgaatcaa ttttagggtt
      181 ttttttctcc ataaccagca gctcctttcc tttctacgat ggtgtaccag attcatgtct
      241 tgtgcgatgg tatgttctcc ataaatcagg agcgtaaaca tggctgggcg tttaatacaa
      301 catagaaagg acgcgcgctg agaggtgacg acaacacata aaacatttat gcactcagat
      361 tgatttgaac catttaccat aaaaatttgc tgaagtcaaa gtatgaggct attatgaaag
      421 agcgtgaata attatggtca atacttatca gttgatcaag taacatctct ttacataaca
      481 aagagattct tgcacgatta ccctcttttg acagctgcaa atagagctca catcgttaca
      541 cgtacctttt aaatgaggat caagcgtttt gtcgccacta taaaagaaaa aaaaaagcct
      601 tccaagaaag tcaggggagt tgctatctgg gcgattttgt gcaggttgct atctgctgtc
      661 acatgtattt gtagtagttt tgtttcatat cagttacttt cccgttagtc ttattcgagt
      721 gtaatgttct gtctgggtcc tgcttggccc ccttttcatt gt
//
LOCUS       XM_071886230             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904293), mRNA.
ACCESSION   XM_071886230
VERSION     XM_071886230.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139904293"
                     /note="uncharacterized LOC139904293; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904293"
     CDS             28..432
                     /gene="LOC139904293"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742331.1"
                     /db_xref="GeneID:139904293"
                     /translation="MGIGDVEKMVAVGLIWGATNALMRRGAIISEKQIHTQKSSSTKT
                     KNPIFTILIDWFSLLLVWQYSVPFLVNLSASVTFFAILNDTPISLAVPVTNATTFAAT
                     AVFGMLLGEETRVGLTLLGTFLIVLGVYICVI"
     misc_feature    52..426
                     /gene="LOC139904293"
                     /note="Putative transmembrane family 234; Region: TMEM234;
                     cl46810"
                     /db_xref="CDD:481150"
ORIGIN      
        1 tatcgtaccg aaacctaaat caccgggatg gggatcggag acgttgagaa gatggtggcc
       61 gtggggttaa tttggggagc tacaaatgcc ctaatgcgtc gaggtgcaat tatatccgaa
      121 aaacaaattc acacccaaaa atcatcatca acaaaaacca aaaatccaat ttttacaatc
      181 ttaattgact ggttcagtct gctattagtt tggcaatact ctgttccctt tttagtcaat
      241 ctttctgctt ctgttacatt ttttgcgata ttaaatgaca cgccgatctc acttgctgtt
      301 ccggtgacca atgcgacgac gtttgctgcc accgctgtgt ttgggatgtt gcttggtgaa
      361 gaaacacgtg tcgggttaac tttacttggt actttcttga ttgttctcgg tgtttatata
      421 tgtgttatat aaattcaatt agtaacgtta caaattggaa taatgattgg atttttatga
      481 atttcttgtg ttgcttaatt gattattatg tactgcccat caagtgtttg atgtaatgcc
      541 agtgtgaaca ttttttccta cgtattacca aattat
//
LOCUS       XM_071886231             876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable xyloglucan
            endotransglucosylase/hydrolase protein 26 (LOC139904294), mRNA.
ACCESSION   XM_071886231
VERSION     XM_071886231.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..876
                     /gene="LOC139904294"
                     /note="probable xyloglucan endotransglucosylase/hydrolase
                     protein 26; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 65 Proteins"
                     /db_xref="GeneID:139904294"
     CDS             1..876
                     /gene="LOC139904294"
                     /codon_start=1
                     /product="probable xyloglucan
                     endotransglucosylase/hydrolase protein 26"
                     /protein_id="XP_071742332.1"
                     /db_xref="GeneID:139904294"
                     /translation="MALYRDLVMAVFVFAIAFSSSMVSANFRKSMSFNWGAQHSSILG
                     NGDDLRLVLDKTSGSGIQSKRSFLYGSFEMLIKLVPGNSAGTVTTYYLSSTGDKHDEI
                     DFEFLGNSTGEPYTVHTNIFTQGQGNREQQFQLWFDPTANYHNYTIHWNPTEVVWYVD
                     SLPIRVFRNYQSQGIGYPNQQGMRVYSSLWNADNWATRGGLVKIDWTAAPFVANYRRF
                     RARACKWNGPVSMTQCAIPTRGNWWTSPVYKQLTMSQQGQLKWVRNNHMIYNYCTDFK
                     RFNGQMPPECSMPQY"
     misc_feature    1..873
                     /gene="LOC139904294"
                     /note="Probable xyloglucan endotransglucosylase/hydrolase
                     protein; Provisional; Region: PLN03161"
                     /db_xref="CDD:178706"
ORIGIN      
        1 atggcgcttt atcgagattt ggttatggct gtttttgtgt ttgcaatagc attcagttcg
       61 tccatggtta gtgcaaactt ccgaaaaagt atgtctttca attggggtgc tcagcattca
      121 tcgattttag gaaatggtga tgaccttcgt cttgttttag acaaaacctc aggatctggc
      181 atccaatcaa agaggtcgtt cttatatgga agcttcgaaa tgctaatcaa gttggttccg
      241 ggcaactctg ctggaactgt gacaacatat tatttgtctt ctacgggtga caaacatgat
      301 gagattgatt ttgagttttt aggaaattcg acgggagagc cttatactgt gcacacgaac
      361 atctttactc aaggtcaagg taaccgagag cagcagttcc aattatggtt tgacccgact
      421 gctaattatc ataactacac cattcactgg aaccctacgg aagttgtatg gtatgttgat
      481 agtctaccga tcagggtctt cagaaactat cagagtcaag ggatcggtta cccaaaccaa
      541 caaggcatgc gagtctactc cagtttatgg aatgctgata actgggctac aagaggtggt
      601 ctagtaaaaa tcgactggac cgctgcacca tttgtggcca actaccgtag gttcagggct
      661 agagcttgta agtggaacgg gcctgttagt atgacccaat gtgccattcc tacccgaggc
      721 aactggtgga catctcctgt ttataagcag ttgactatga gtcaacaggg tcaactgaaa
      781 tgggttagaa ataaccacat gatatataac tactgcactg acttcaagcg tttcaacggc
      841 cagatgccac ccgagtgctc tatgccgcaa tactaa
//
LOCUS       XM_071886232             876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable xyloglucan
            endotransglucosylase/hydrolase protein 26 (LOC139904296), mRNA.
ACCESSION   XM_071886232
VERSION     XM_071886232.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..876
                     /gene="LOC139904296"
                     /note="probable xyloglucan endotransglucosylase/hydrolase
                     protein 26; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 44 Proteins"
                     /db_xref="GeneID:139904296"
     CDS             1..876
                     /gene="LOC139904296"
                     /codon_start=1
                     /product="probable xyloglucan
                     endotransglucosylase/hydrolase protein 26"
                     /protein_id="XP_071742333.1"
                     /db_xref="GeneID:139904296"
                     /translation="MAGSRALFMAVVLLSVVFRTSKVDANFPKSMYFNWGAQHSSVLG
                     DGDDIQLVLDQTSGTCIQSKKVFLFGSIEMLIKLVPGNSAGTVAAFYLSSAGDKHDEI
                     DFEFLGNSTGEPYTVHTNIFLQGQANREQEFGLWFDPTADFHNYTIHWNPTQVVWYVD
                     SIPIRIFRNYESEGIPYPNQKGMRVYSSLWNADNWATRGGLVKIDWTAAPFVANYRNF
                     RARSCEWNGPCSISQCALTARDNWWTSTGYKQLTISEQDQLKWVRDNHMMYNYCSDVW
                     RFNGQMAPECSKPQY"
     misc_feature    1..873
                     /gene="LOC139904296"
                     /note="Probable xyloglucan endotransglucosylase/hydrolase
                     protein; Provisional; Region: PLN03161"
                     /db_xref="CDD:178706"
ORIGIN      
        1 atggcaggtt ctcgagcttt gttcatggcg gttgttctgc tttcagtagt atttcgaact
       61 tctaaggttg atgcgaactt tcctaaaagc atgtatttca attggggtgc tcaacattct
      121 tcagttttag gcgacggtga tgatatccag ctcgttttgg atcaaacttc aggaacttgt
      181 atccaatcaa agaaggtgtt cttattcgga agcattgaaa tgctaatcaa gttggttcct
      241 ggtaactctg ctggaactgt agcagcattt tatttgtcgt cagcaggcga caaacatgat
      301 gagatcgact ttgagtttct agggaactcg actggagagc cgtacacagt acacacaaac
      361 atctttcttc aaggtcaagc gaaccgagaa caggagttcg ggttatggtt tgacccgact
      421 gccgattttc acaactacac cattcactgg aacccaactc aagttgtatg gtatgttgat
      481 agtataccta tcagaatttt tagaaactac gagagtgaag ggattccata ccctaatcaa
      541 aaagggatgc gagtctattc aagtttatgg aatgcggata attgggctac gagaggtggt
      601 ctagtcaaaa ttgactggac cgcagcacca tttgtggcta actaccgtaa cttcagggct
      661 agatcttgtg agtggaacgg gccctgtagc attagccaat gtgccttaac cgcccgagac
      721 aactggtgga catctacggg ttacaagcaa ctgacaataa gtgaacagga tcaactcaaa
      781 tgggttagag ataatcatat gatgtacaac tactgctccg atgtttggcg ctttaatgga
      841 cagatggcac ccgaatgctc taagccacag tattaa
//
LOCUS       XM_071886233             996 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable xyloglucan
            endotransglucosylase/hydrolase protein 26 (LOC139904297), mRNA.
ACCESSION   XM_071886233
VERSION     XM_071886233.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..996
                     /gene="LOC139904297"
                     /note="probable xyloglucan endotransglucosylase/hydrolase
                     protein 26; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 41 Proteins"
                     /db_xref="GeneID:139904297"
     CDS             1..879
                     /gene="LOC139904297"
                     /codon_start=1
                     /product="probable xyloglucan
                     endotransglucosylase/hydrolase protein 26"
                     /protein_id="XP_071742334.1"
                     /db_xref="GeneID:139904297"
                     /translation="MAGSQAFVMAVFVIAVALSSSMVNANFPKSMYFNWGAQHSSILA
                     NGDALQLVLDKTSGSGIQTKRSFLFGSVEMLIKLVPGNSAGTVTAYFLSSTGDKHDEI
                     DFEFLGNSTGEPYTMHTNIFTQGQGNREEQFKFWFDPTADFHNYTIHWNPTEVVWYVD
                     SIPVRVFRNYQSVGIAYPNQQGMRVYSSLWDADNWATRGGLVKIDWTAAPFVANYRRF
                     RARACKWNGPVSITQCANNSTKTNWFTSPVYQQLTASQLVKLQWVRDNYMIYNYCTDV
                     MRFHGKMAPECALPQN"
     misc_feature    1..873
                     /gene="LOC139904297"
                     /note="Probable xyloglucan endotransglucosylase/hydrolase
                     protein; Provisional; Region: PLN03161"
                     /db_xref="CDD:178706"
ORIGIN      
        1 atggccggtt ctcaagcttt tgttatggct gtttttgtga ttgcagtagc attgagttct
       61 tccatggtca atgcaaactt cccaaaaagt atgtatttca attggggtgc tcaacattca
      121 tcgattctag caaacggtga tgccctccag cttgttttag acaaaacttc aggatctggt
      181 atccaaacaa aaaggtcgtt tttatttgga agtgttgaaa tgctaatcaa gttggttcca
      241 gggaactctg ctggaactgt aaccgcatac tttttgtctt ctaccggtga taaacatgac
      301 gagattgatt ttgagttctt aggtaactcg acaggagaac catacacgat gcacacaaac
      361 attttcaccc aaggtcaagg taacagagaa gaacaattca aattttggtt tgacccaact
      421 gctgactttc acaattacac cattcactgg aacccaacag aagttgtatg gtatgttgac
      481 agtatacctg ttagagtctt cagaaactat cagagtgtag ggattgcata cccaaaccaa
      541 caaggaatgc gagtctactc aagtttatgg gacgctgata actgggctac aagaggtggt
      601 ctagtcaaaa ttgactggac cgctgcacca tttgtggcta actaccgtag gtttagggct
      661 agagcttgta agtggaacgg ccctgttagc attacccaat gtgctaataa ttctaccaag
      721 accaactggt ttacatctcc tgtttaccag cagttgaccg caagtcaact ggttaagctt
      781 caatgggtca gagataacta catgatctat aactactgta ccgatgttat gcggtttcat
      841 ggaaagatgg cacccgaatg tgctttgcca cagaactagc catattaaca ttattatagt
      901 aactcgatca tttcaagttt ttcgaaggtt tcttcttttg taatactcta ttttgtttca
      961 aaattttgaa gattcttttg ttgctcttca gctcat
//
LOCUS       XM_071886234            1550 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            ATL42-like (LOC139904298), mRNA.
ACCESSION   XM_071886234
VERSION     XM_071886234.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1550
                     /gene="LOC139904298"
                     /note="E3 ubiquitin-protein ligase ATL42-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904298"
     CDS             94..1368
                     /gene="LOC139904298"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase ATL42-like"
                     /protein_id="XP_071742335.1"
                     /db_xref="GeneID:139904298"
                     /translation="MDFSVIQQKKFLHILIFFIIIISSKSIKAQSLSSSNSNSPNSQD
                     TANNFQPSLAIVIGVLALMFCLTMVLLIYAKCCHRPSLIILNQENFGEIPRSANSRLS
                     GIDKTVIESLPFFRFSTLKGWRNGLECSICLSKFEDVEILRLLPKCKHAFHIVCVDQW
                     LEKHSGCPLCRCKVSAEDATLSAYSNSFRFLGNQSDRAREGSNLELFIEREGSSRFGS
                     GRSFRKIEKENDQEILEDQETLHKYNHRIIISDYDDDLMGKNRWSNLNASDLLCLKSE
                     MITSLSSDYLDRLNDPEMIASMSSNKLDCYPCSRKGEKGHKHDHVHEAIKIKEEIKLK
                     REFEKKIKKFPGGESSASKSTKLDEKRSMSEIIVHPRLLDAESTNNEANLGEISTKEE
                     RLKRLWLPIARRTVQWFANRDQKPYNNMILQV"
     misc_feature    <337..627
                     /gene="LOC139904298"
                     /note="RING-finger-containing E3 ubiquitin ligase
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: PEX10; COG5574"
                     /db_xref="CDD:227861"
     misc_feature    475..606
                     /gene="LOC139904298"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins; Region:
                     RING-H2_EL5-like; cd16461"
                     /db_xref="CDD:438124"
     misc_feature    559..576
                     /gene="LOC139904298"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
ORIGIN      
        1 attaaaattt tctcaagaat agcaactcta taaactaaac cgaacaaaaa tgtcaaaaca
       61 ctcgaccctc ttggttgtct gtacaaagaa gccatggact tttcggttat ccaacaaaag
      121 aaatttcttc atatcctcat atttttcatc attataatct cttctaaatc aataaaagca
      181 caatctttat cgtcttcgaa ttcgaattcg ccaaactcac aagatactgc caataatttc
      241 caaccaagtt tagcaattgt gattggagtt cttgccctaa tgttttgttt aacaatggtt
      301 ctcttgattt atgcaaaatg ttgtcacaga ccttctctta taattttaaa tcaagaaaat
      361 tttggtgaga taccaagatc agctaattct aggctttctg gtatagataa aacagtgatt
      421 gaatcgcttc ctttttttcg gttttcaact ttaaaaggtt ggagaaatgg tttggaatgt
      481 tctatttgtt tgtccaaatt tgaagatgtt gagattctta gattgttgcc aaaatgtaaa
      541 catgcttttc atattgtttg tgtggatcaa tggcttgaaa aacattcggg ttgtccactt
      601 tgtaggtgta aagtaagtgc agaggatgca accctttccg cgtattcaaa tagttttagg
      661 tttttgggta accaatcgga tcgtgcacgt gaaggttcaa acttggagct atttattgaa
      721 agagaaggat catctagatt tggaagtgga agaagttttc gaaaaattga aaaagaaaat
      781 gatcaagaaa tcttggaaga tcaagaaacc ttgcataagt ataatcatag gatcataata
      841 tcggattatg acgatgattt gatgggaaag aatagatgga gcaatttaaa tgcatctgat
      901 cttttgtgtt tgaaatccga gatgattact tctttgtcaa gcgactatct tgatcgtctt
      961 aacgatcccg aaatgattgc ctctatgtca agcaacaaac ttgattgtta cccgtgttcc
     1021 agaaaaggtg aaaaaggtca taaacatgat catgttcatg aagctatcaa aatcaaagaa
     1081 gaaatcaaac taaaaaggga attcgagaag aaaattaaga aatttccagg tggagaatct
     1141 tctgcgtcga aatccactaa acttgatgaa aaaagatcga tgtcggagat catagttcat
     1201 cctagattgt tagatgctga atcaactaat aatgaagcta atttgggtga gattagtact
     1261 aaagaagaga gattgaagag attatggcta ccaattgctc gaagaacggt tcaatggttt
     1321 gctaatagag atcaaaagcc atataataac atgattttgc aagtttaaat tagtcccatc
     1381 agttgattta atcttaaact ttcatgttcc aacaagttat cgaagaaaat gattatatac
     1441 ctatttgtag atttttaatt tttaattttt aggatttata cataaagaag aaccttttaa
     1501 aaccatatct agtaaatttt ttattgatat ataggatgtg tattttttgt
//
LOCUS       XM_071886236            1954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sugar transport protein
            14-like (LOC139904299), mRNA.
ACCESSION   XM_071886236
VERSION     XM_071886236.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1954
                     /gene="LOC139904299"
                     /note="sugar transport protein 14-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 Proteins"
                     /db_xref="GeneID:139904299"
     CDS             197..1735
                     /gene="LOC139904299"
                     /codon_start=1
                     /product="sugar transport protein 14-like"
                     /protein_id="XP_071742337.1"
                     /db_xref="GeneID:139904299"
                     /translation="MAGGGMVASKGGARAELYEHKITSYFIFACIVAALGGSLFGYDL
                     GVSGGVTSMDHFLKEFFPNVYRRKQAHLKETDYCKYDNQILTLFTSSLYFAALVSTFL
                     ASHVTRNKGRRASILWGAVSFFAGAVMNAAAQNIAMLIIGRCLLGFGIGFGNQAVPLY
                     LSEMAPAKIRGAVNQLFQLTTCLGIFVANFINNATEKHSWGWRLSLGLATVPATLMFV
                     GGLFLPETPNSLVEQGRLDEGRDVLEKVRGTKNVEAEFQDLLEASEAAKQIKHPFRNL
                     LKRKNRPQLIIGALGIPAFQQLTGNNSVLFYAPVIFQSLGFGSGASLWSSTITSGTLV
                     VATFISMAFVDKFGRRAFFLEAGTEMIICMIAVAVTLALKFGQGVELPKGIGIFLVIM
                     ICIFVLAYGRSWGPLGWLVPSELFPLETRSAGQSIVVCVNMFFTALVAQCFLVSLCHL
                     RYGIFLLFAGMIVIMSIFIYLLLPETKQVPIEEIHLLWQTHWFWKSYCAPEVQSEEKE
                     MKPV"
     misc_feature    290..1621
                     /gene="LOC139904299"
                     /note="Plant Sugar transport protein subfamily of the
                     Major Facilitator Superfamily of transporters; Region:
                     MFS_STP; cd17361"
                     /db_xref="CDD:340919"
     misc_feature    order(314..316,326..328,728..730,737..742,749..751,
                     1082..1087,1097..1102,1109..1114,1193..1195,1394..1399,
                     1406..1411,1421..1423,1490..1495,1502..1504)
                     /gene="LOC139904299"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:340919"
ORIGIN      
        1 acactcacgc tcggatacta cgccattatc ttatttctta attttatttg ataaaaccat
       61 aacgaataat aacagtaact ataactatta ctcatattcc atgaaaaacc accctcatac
      121 atagggacac aatcaccata tacatttttc actatcttta tatcttttga tagttgactt
      181 ctgataaaga caaacaatgg ccggcggcgg aatggtggct agcaagggtg gcgctagggc
      241 ggagttgtac gaacacaaga tcacctcgta ttttattttc gcatgtattg ttgctgcgct
      301 tggtggatct ttatttggtt atgatcttgg tgtttcaggt ggtgtaacat ccatggatca
      361 ttttttgaag gaatttttcc caaatgtgta tagaaggaaa caagcacatc ttaaagaaac
      421 tgattactgc aagtatgaca accaaatcct cacacttttc acatcatcac tttatttcgc
      481 cgcactcgta tctacctttt tagcttctca tgtcacccga aataagggcc gaagagctag
      541 tattctttgg ggtgctgtta gcttcttcgc tggagctgtt atgaatgcag cagctcaaaa
      601 tatagctatg ctcattattg gccgttgcct tcttggtttc gggatcggat tcggtaacca
      661 agcagttcct ctgtatctat cagaaatggc gccagcaaag attagagggg cagtgaatca
      721 gttgtttcag ttaacaactt gtttaggaat ttttgtagcc aattttataa acaatgctac
      781 tgagaaacat tcatggggat ggagattatc actcggatta gcgacagttc ctgcaacatt
      841 aatgtttgtt ggggggcttt tcttgcccga aacaccaaac agtttagtag aacaaggaag
      901 gttagatgaa ggaagagacg ttttggaaaa agttagaggt acaaagaatg tagaagcaga
      961 atttcaagat ttacttgaag caagtgaagc tgctaaacag atcaaacatc cttttagaaa
     1021 ccttttaaag aggaaaaatc gaccgcaact gataattgga gctttgggta tacctgcatt
     1081 tcaacaactt accggaaata attccgtgtt gttttatgcg cctgtgatct ttcagagttt
     1141 agggttcggt tctggtgctt ctttatggtc atccaccatc actagtggca ctcttgttgt
     1201 tgcaacattc atttcaatgg cgttcgttga taaattcggt agacgagcct tcttcttgga
     1261 agctggtact gaaatgatca tctgcatgat tgctgtggct gtaactctag cactgaaatt
     1321 tggacaaggt gttgagctac ctaaaggaat tgggattttt ctagtgatca tgatttgcat
     1381 tttcgtattg gcttatgggc gatcgtgggg gccattagga tggctagttc cgagtgaatt
     1441 gtttccgttg gaaacgagat cagcgggtca aagtattgtg gtttgtgtca acatgttttt
     1501 tacagcatta gttgcacagt gcttccttgt gtcactatgt catctgcgat atggcatatt
     1561 cttgttgttt gctggaatga tagttatcat gagcatcttt atatacttgt tgttgccgga
     1621 aacaaaacaa gttccgatcg aagagataca tttgttatgg caaacgcatt ggttttggaa
     1681 atcttattgt gcacctgaag ttcaatctga agaaaaggag atgaaacctg tatgatttac
     1741 tactttgtct ataatagctt gttactttta tggttattaa gttttatttt tcttttttat
     1801 tgtttgtgtg cacttcaaat attgtctgaa aggcgttggt tcatcggatt atcatagaat
     1861 gaaaatgcac gtttcagtta actatatttg catgttttat tttttattta ctactcgtat
     1921 tattattttt ggtataaatg tatactccat ctat
//
LOCUS       XM_071886237            4063 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            phospholipid-transporting ATPase 4 (LOC139904300), mRNA.
ACCESSION   XM_071886237
VERSION     XM_071886237.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4063
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4063
                     /gene="LOC139904300"
                     /note="probable phospholipid-transporting ATPase 4;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 33 Proteins"
                     /db_xref="GeneID:139904300"
     CDS             129..3776
                     /gene="LOC139904300"
                     /codon_start=1
                     /product="probable phospholipid-transporting ATPase 4"
                     /protein_id="XP_071742338.1"
                     /db_xref="GeneID:139904300"
                     /translation="MAHGRIRAKIKRSSLYTFGCIRPPRESTDEPHLFRGPGFSRHVC
                     CNQPQLHQKKPLKYSKNYISTTKYNVITFLPKALFEQFRRVANVYFLLAAFLSLTPVS
                     PFSAYSMIAPLAFVIGISMCKEAVENWHRFMQDMKVNMRKVRVHNGEGDFLPKPWMNI
                     CVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRALETTLTLDDD
                     SIFKDFRATIKCEDPNPNLYTFVGNLEYERQVFPVDPSQILLRDSKLRNTGHVYGVVI
                     FSGHDSKVMQNATKSPSKRSTIEKQMDKIIYVLFTLLVLISLISSTGFAIKTKTQMPS
                     WWYLQAPDADGLYDPNRAAASGFYHLVTALILYGYLIPISLYVSIELVKVLQALFINQ
                     DIHMYDEETGTPAQARTSNLNEELGMVDTILSDKTGTLTCNQMDFLKCSIAGIPYGMR
                     SSEVELAAASQMAMDLEGHGGDFSGRPGGHNGSEIELDTVVTPRESSQTAIKGFSFED
                     NRLMNGNWSRENNPDVLLLFFRILALCHTAIPEYNEETDTYSYEAESPDEGAFLVAAR
                     EFGFEFCKRTQSSIFVRERHFSSQEFVEREFKLLNLLDFTSKRKRMSVIVQDETGQIY
                     LLCKGADSIIFDRLSKNGRVFEEATTKHLNDYGEAGLRTLALAYKKLEPSEYVAWNDE
                     FIKAKTSIGGDRDIMLERVSDMMEKDLILVGATAVEDKLQPGVPQCIDKLAQAGLKLW
                     VLTGDKMETAINIGFACSLLRQGMKQICISTNVDMLNQDTKKAQKESIVMQITNASQM
                     IKLEKDPHAAFALIIDGKTLTYALEEDLKHQFLNLAVDCASVICCRVSPKQKALVTRL
                     VKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLV
                     VHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYDDWYMLLFNVVLTSL
                     PVIALGVFEQDVSSDICLQFPALYQQGPRNLFFDWYRIFGWMGNGLYCSLIVFFLNII
                     IFYDQAFRIGGQTADMTVVGTAMFTCVIYAVNCQIALTMSHFTWIQHFLIGFSILAWY
                     VFLVLYGMMSPELSGNAYQIFVEALAPAPIFWLSILLVTVACNLPYLAHISFQRSFNP
                     MDHHVIQEIKYYKKDVEDRHMWTRERSKARQETKIGFSARVDAKIRHLRQMLQKKSSV
                     LSPRVALAATR"
     misc_feature    300..3590
                     /gene="LOC139904300"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; Region: Haloacid Dehalogenase-like Hydrolases;
                     cl21460"
                     /db_xref="CDD:473868"
     misc_feature    order(1401..1409,1941..1943,2010..2018,2214..2216,
                     2355..2363,2658..2660,2667..2669,2676..2678,2736..2738,
                     2745..2747)
                     /gene="LOC139904300"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:319770"
     polyA_site      4063
                     /gene="LOC139904300"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcttctaac tataattcac attctaaatc catccttcga gatttactta cgatcttgaa
       61 atttataaca ctaaggctct taaaggaatg cacttttagt ggttactgcg agaaatttta
      121 attaaaaaat ggctcatgga aggatacgtg ccaagataaa gagaagtagt ctttacacat
      181 tcggatgcat acgaccgcct cgtgaatcga cagacgagcc tcatctattt cgtgggcccg
      241 gtttttctag acatgtttgt tgtaaccaac ctcaattaca tcaaaagaaa ccactcaaat
      301 acagcaagaa ttacatatca accacaaagt ataatgtaat tactttttta ccaaaagccc
      361 tctttgagca atttcgacgt gttgcaaatg tgtacttcct cttagctgca tttctttcat
      421 tgacccccgt ctcacccttt tcagcttaca gtatgattgc accattagct tttgtgatcg
      481 ggattagtat gtgtaaagaa gctgttgaaa attggcatcg attcatgcag gacatgaagg
      541 taaatatgag gaaagtgagg gttcataatg gcgagggtga ttttttaccg aaaccgtgga
      601 tgaatatatg cgtcggggat gttgtaaaag tggaaaaaga tcagtttttt ccggcggatt
      661 tacttttgtt atcgtctagt tacgaagacg ggatttgtta cgttgaaaca atgaatctag
      721 atggtgagac gaacttaaaa gttaaaagag ctttagaaac gaccttaact ttagatgatg
      781 attccatttt taaagatttt agagcaacaa tcaaatgcga ggacccgaac ccgaatcttt
      841 atacatttgt cgggaatctt gaatatgaac gccaagtgtt tcctgttgac ccgagtcaga
      901 ttttgcttcg ggactcgaag ctgcggaaca cgggtcacgt ttacggggtg gtgatatttt
      961 cgggtcatga tagtaaagtg atgcaaaacg ctactaaatc accttctaaa agaagcacga
     1021 ttgagaagca aatggacaag attatttacg tcttgtttac ccttttggtg ttaatatcat
     1081 taattagttc aacaggtttt gctattaaaa caaaaacaca aatgccaagt tggtggtact
     1141 tgcaggctcc cgatgctgat ggtttatacg atcccaaccg tgctgcagca tcggggtttt
     1201 atcatttggt tactgcctta attctgtatg ggtatttgat accgatctca ctttatgttt
     1261 ctattgagct tgtgaaggtt ttgcaagcgt tgtttataaa tcaagatatc cacatgtacg
     1321 atgaagaaac gggtactcca gcgcaagcgc gtacctcgaa tttgaacgaa gaattaggga
     1381 tggttgacac aattttgtct gataaaaccg ggactttaac gtgtaatcaa atggactttt
     1441 tgaagtgttc gattgcggga atcccgtatg gtatgcggtc gagtgaagtt gagcttgctg
     1501 ccgccagtca aatggctatg gatcttgaag ggcatggtgg tgatttctcg ggtcgacccg
     1561 gtggacataa cgggtcggaa attgagttgg atacggtagt gacaccgaga gaaagttcac
     1621 aaacggctat taagggattt agctttgagg ataatcggct tatgaatggg aattggtcac
     1681 gagagaacaa tccagatgtt ttgttgttgt tttttcgaat acttgctctt tgtcacacag
     1741 cgattcctga gtataatgaa gagacggata cttatagcta tgaagccgaa tcaccagatg
     1801 aaggagcttt tcttgttgct gcaagagagt tcgggtttga attttgtaaa agaacgcaat
     1861 caagtatatt tgttcgcgag aggcattttt cttctcaaga atttgttgaa agggagttca
     1921 aacttctaaa cctgttggac ttcacaagca aacgaaaacg gatgtcggtt attgttcagg
     1981 acgagaccgg gcagatttat ttactgtgca aaggggcaga cagcattata tttgatcgtt
     2041 tatccaaaaa tgggagagta tttgaggagg cgactacaaa gcatctaaat gattatgggg
     2101 aagctggact acgtacactg gcacttgcgt acaaaaagct ggaaccgtct gaatacgttg
     2161 cgtggaatga tgagtttatt aaggccaaaa cttcgattgg tggtgacaga gacataatgc
     2221 ttgaacgagt atcagacatg atggaaaaag atctgattct tgttggtgca actgcagttg
     2281 aggataagct gcaaccaggg gtgcctcaat gtattgataa attggctcaa gctgggctta
     2341 agttatgggt tctaacaggc gataaaatgg aaactgcaat taacatagga tttgcatgta
     2401 gtttgcttag gcagggcatg aagcaaatat gtatctcaac aaatgtggat atgttgaacc
     2461 aagatacaaa gaaggctcaa aaggagagca tagtaatgca aataacgaat gcttctcaaa
     2521 tgattaagct tgaaaaggat ccacatgctg catttgcatt gattatcgat gggaagactt
     2581 taacttatgc tttggaggaa gatttgaagc atcagttttt aaatttagcc gttgattgcg
     2641 cttctgtcat atgctgtcgt gtctctccta agcagaaagc cctggttacg agattggtga
     2701 aagaagggac agggaaaaca acgttagcaa ttggagatgg tgcaaatgat gtgggaatga
     2761 ttcaagaagc agatattggt gttggaataa gtggcgttga aggaatgcag gctgtgatgg
     2821 ctagtgactt ctctattgca cagtttcggt ttctggagag gcttttggtc gtacatggtc
     2881 attggtgcta taagcgaatc gcccaaatga tatgctattt cttttacaag aacattgctt
     2941 ttgggcttac acttttctac tttgaggcat ttacgggctt ctcagggcaa tcggtgtacg
     3001 acgattggta tatgcttcta ttcaatgttg ttcttacatc attgcccgtt atcgcacttg
     3061 gtgtttttga gcaagacgta tcctccgaca tctgcttgca gtttccagca ttgtatcagc
     3121 aaggaccaag aaatctattt ttcgactggt accgtatatt tggctggatg ggaaacggtc
     3181 tgtattgttc tctcatcgta ttctttctca acatcatcat tttttatgac caagcgttcc
     3241 ggataggcgg gcagacagct gacatgactg tagtggggac cgctatgttc acgtgtgtga
     3301 tctacgccgt caattgtcaa atcgccctca ccatgagcca cttcacatgg atacaacact
     3361 ttctaattgg ttttagtatc ctcgcgtggt acgtgtttct tgtactatac gggatgatgt
     3421 ctccggaact ttctggaaat gcgtatcaaa tctttgtgga agcacttgct cctgctccca
     3481 tattttggtt gagcatactt ttggtaacgg tggcgtgtaa tctaccgtat ttggctcaca
     3541 tatcgtttca aagatcgttt aatccaatgg atcatcatgt gattcaagaa attaaatatt
     3601 ataagaaaga tgttgaggat cgacatatgt ggactagaga aagatcgaaa gctagacaag
     3661 aaacaaaaat cgggttttca gcgagggtag atgcaaagat aagacatctg cgacaaatgt
     3721 tgcagaagaa gtcttctgta ttgagtcctc gtgttgcttt ggccgcaact cggtaacctt
     3781 tatattctct ttttggtttt tctggtaatg tttatagtta tgtgtagggt ttgtaagttc
     3841 atttctcatg ttcctttttt tttttttttt tttttttttt tttttttttt tttggagttg
     3901 ggcgtttttt gattcattaa agatatatgg aaaaagtata gtggcatttg tatgtagaag
     3961 tattgaaagt ggggttcatt tgcaggcagt gaaaatagtc aatattcgta tgggttgact
     4021 ttgacaattt gttatgtttg ttacttaact gtttgtcgtg taa
//
LOCUS       XM_071886238             790 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable ribosome biogenesis
            protein RLP24 (LOC139904302), mRNA.
ACCESSION   XM_071886238
VERSION     XM_071886238.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..790
                     /gene="LOC139904302"
                     /note="probable ribosome biogenesis protein RLP24; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139904302"
     CDS             87..584
                     /gene="LOC139904302"
                     /codon_start=1
                     /product="probable ribosome biogenesis protein RLP24"
                     /protein_id="XP_071742339.1"
                     /db_xref="GeneID:139904302"
                     /translation="MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKR
                     NPRKVKWTKAYRRLHGKDMTQDATFEFERKRNRPERYDRNLTQTTLEVIKKIDKVRSR
                     REEKHHKNRMVGKRAKEMREAKKEHDQQIYLIKDPSVLAKESSAKAVKVKVQHESTDD
                     NRMEE"
     misc_feature    90..278
                     /gene="LOC139904302"
                     /note="Ribosomal protein L24e; Region: Ribosomal_L24e;
                     pfam01246"
                     /db_xref="CDD:460131"
     polyA_site      790
                     /gene="LOC139904302"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcaaaaacc ctcccccaaa tctcacttcg tttttgttgt ttcgccagcc ctaaccaaaa
       61 ggaaatattg ggtgtaagac tctgcaatga ggttggaaaa gtgttggttc tgttcatcta
      121 cggtatatcc cggacacggt atccagtttg ttcgtaatga tgcaaagatc tttagatttt
      181 gtagatcaaa atgccacaag aacttcaaaa tgaagaggaa tccacgtaag gtgaaatgga
      241 ctaaagctta taggcgatta catggaaagg acatgactca ggacgccact tttgaatttg
      301 agaggaagcg taacaggcca gagaggtatg acagaaatct cactcagacc acattggagg
      361 taatcaaaaa gatcgacaag gtcagatccc gccgtgaaga gaaacatcac aagaacagga
      421 tggtaggtaa gcgtgcaaag gaaatgcgtg aggctaaaaa ggaacatgac cagcaaatct
      481 acttgattaa ggatccaagt gtattggcca aagaatcgtc tgctaaagcg gttaaggtca
      541 aggttcaaca tgaatctact gatgataata gaatggaaga atgattcatt ctgaatgctt
      601 ttggagcttg gatcgtgttg ccttataaac aacctgtatt cctagtaact gaaatgtttc
      661 aagttatttt caagttgacc tgatgtattt gacatggata tactactaga caaaatatat
      721 tactatttat ggtcatttta tttgattacc gtaaaactat atctatctaa acagtaagtg
      781 tttttttttt
//
LOCUS       XM_071886239            1269 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-responsive
            transcription factor TINY-like (LOC139904303), mRNA.
ACCESSION   XM_071886239
VERSION     XM_071886239.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1269
                     /gene="LOC139904303"
                     /note="ethylene-responsive transcription factor TINY-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 25 Proteins"
                     /db_xref="GeneID:139904303"
     CDS             238..1077
                     /gene="LOC139904303"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     TINY-like"
                     /protein_id="XP_071742340.1"
                     /db_xref="GeneID:139904303"
                     /translation="MADAGMETEPASTTLSDPFVKQTGLIEPNPKRLKRVHENLDDDD
                     DDDDGNDTGCCDNNTNTNTNNNNNNISNSKTNNNNSKHLVYRGVRMRAWGKWVSEIRE
                     PKKKSRIWLGTFSNPEMAARAHDVAALSIKGKSAILNFPELVDLLPRPESCSPRDIQA
                     AATKAASMDHLIPTPSTPSTTSSSSSTLTSSSSSTSLVTSDEVSTTPAEELSEIVELP
                     SLGGSYDSAESRDDFVFVDSVWDHYASPSWTEEYDVACFAGETPFYGSSSGFFFDALL
                     WQH"
     misc_feature    490..666
                     /gene="LOC139904303"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(493..498,502..504,508..510,514..516,520..522,
                     532..534,538..540,559..561,565..567,574..576)
                     /gene="LOC139904303"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
ORIGIN      
        1 gaacctccct tcttcatccc aaaatacaca tctcaatatt actacacaat ccgggtcggg
       61 ttgggttaag tatacatctc acacaccaaa cactttaaaa acttgagtcc gcgtttatat
      121 ttcgcataca tccaaagcct cccttttccc taaaaacgta catctccaac tactaaacat
      181 tccgggtcgg atcggatcgg gccagacaat cttaatattt cttgattact ggtgataatg
      241 gcggatgccg gaatggaaac tgaacccgca tccactacat tatctgaccc ttttgtcaaa
      301 caaaccgggt tgatcgaacc aaaccctaaa agactgaaaa gggtccatga aaacctggat
      361 gatgatgatg atgatgatga tggaaatgat accggctgtt gtgataataa tactaatact
      421 aatactaata ataacaataa taatattagt aacagcaaaa caaacaacaa taatagtaag
      481 catctagttt atagaggtgt tcggatgcgg gcatggggaa aatgggtatc cgagatccga
      541 gaaccaaaga aaaaatctcg gatctggttg ggtacctttt ccaacccgga aatggccgca
      601 cgtgcacatg atgtagcagc actttctatc aaaggtaagt cggcgatcct taatttcccc
      661 gaactcgtgg atcttttgcc ccgacccgaa tcatgttcac cacgtgacat ccaagctgcc
      721 gctactaaag ctgcttccat ggaccacctt attccaacgc cgtcaacacc ttccacgaca
      781 tcttcttcgt cgtccacgtt gacatcctcg tcatcttcca cgtcattggt tacatcggat
      841 gaagtgtcaa cgacaccagc tgaggagttg agtgagatag ttgagttgcc aagtttagga
      901 gggagttatg actcagctga gtcgagggat gattttgtat ttgttgactc ggtttgggat
      961 cactacgcat cgccatcgtg gacagaggag tatgacgtgg catgttttgc tggagagaca
     1021 cctttttatg gatcttctag tggttttttc tttgatgcgt tattatggca acattaaaaa
     1081 agtttaaaat aataataaaa aaaactcaca agaaatatat tgtttgtgtg gttttttcat
     1141 tttgtttagc cccctaattg gggttttgtt tggcctttta ttttgttttg ttttagtcta
     1201 ttacgtgtat ttaatcccaa tgtcttgatg cttcaagata tcttctacta cttttttctt
     1261 aattttgct
//
LOCUS       XR_011778725             887 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904304), transcript variant X1, ncRNA.
ACCESSION   XR_011778725
VERSION     XR_011778725.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..887
                     /gene="LOC139904304"
                     /note="uncharacterized LOC139904304; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904304"
     ncRNA           1..887
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904304"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904304"
ORIGIN      
        1 ggataaatag gcaggttggt aatgtatgat attgggatgg ctaaaggggt aaaatagagt
       61 tgatatcttg atgtggatag ctgaccctga aacaattgat aagtgggtag tgattgtcac
      121 tttttcttat aatcatagtt ttacatcccg ttattggttt tgtggttgtg gtaccaatga
      181 ttgattaagc tcctaatgta acttagctag caaaagggct tgaaacatga aggttcaatt
      241 gatgttgcag ttcaacaacc cattgcaata acggtaagtt tatgtattac ccaaagtgga
      301 gcaatattta ttttttcagt ttcgtactat aaagtaaaag caactatatt atcattagac
      361 cctcttccat ctttcataga ggagctaaaa ggtatgaact catatatctt tcattaaagt
      421 gtacgtttcc acccccacta cttaattgtt tatctacatc cgaaacatca atttggtgtc
      481 aaaatcttgg ttaatgacat cataatctta attgtggcag ttaattggga aatggaacaa
      541 aagctaatga atactgaatc tgattcagta ttgaatatgg agaccgatag tatggacagt
      601 gatcaagaga tgaagtctag gaaggtatgt caatgcttgg attggttgat gatttttcag
      661 ttgtgggaga tcaactattg gtgctcatgt atatgatggg agaagattgt agatgagatg
      721 atgaatttgt tgatctgcat aaaaggtatt tacaaaaaac atatattgaa ttgtcgtcca
      781 actcctccgt ttgttgttcc tcttccgttc aataacaaaa aagggtgccc aagagaaaag
      841 taatttttac ggctttaaaa ttgtatcttt attttaaaag aagattt
//
LOCUS       XR_011778726             776 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904304), transcript variant X2, ncRNA.
ACCESSION   XR_011778726
VERSION     XR_011778726.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..776
                     /gene="LOC139904304"
                     /note="uncharacterized LOC139904304; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904304"
     ncRNA           1..776
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904304"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904304"
ORIGIN      
        1 caactatttt gacagggttt atgttttcca tttcagcgtt atactgatga ggcaggagtt
       61 tgagaactgc tacatggttg atttttgtgt ttctgctagc aaaagggctt gaaacatgaa
      121 ggttcaattg atgttgcagt tcaacaaccc attgcaataa cggtaagttt atgtattacc
      181 caaagtggag caatatttat tttttcagtt tcgtactata aagtaaaagc aactatatta
      241 tcattagacc ctcttccatc tttcatagag gagctaaaag gtatgaactc atatatcttt
      301 cattaaagtg tacgtttcca cccccactac ttaattgttt atctacatcc gaaacatcaa
      361 tttggtgtca aaatcttggt taatgacatc ataatcttaa ttgtggcagt taattgggaa
      421 atggaacaaa agctaatgaa tactgaatct gattcagtat tgaatatgga gaccgatagt
      481 atggacagtg atcaagagat gaagtctagg aaggtatgtc aatgcttgga ttggttgatg
      541 atttttcagt tgtgggagat caactattgg tgctcatgta tatgatggga gaagattgta
      601 gatgagatga tgaatttgtt gatctgcata aaaggtattt acaaaaaaca tatattgaat
      661 tgtcgtccaa ctcctccgtt tgttgttcct cttccgttca ataacaaaaa agggtgccca
      721 agagaaaagt aatttttacg gctttaaaat tgtatcttta ttttaaaaga agattt
//
LOCUS       XR_011778727            1547 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904305), transcript variant X1, ncRNA.
ACCESSION   XR_011778727
VERSION     XR_011778727.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1547
                     /gene="LOC139904305"
                     /note="uncharacterized LOC139904305; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904305"
     ncRNA           1..1547
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904305"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904305"
ORIGIN      
        1 atctctctcc ctaaaattgt caaaaacaaa ttcaagacgg gtcagttttt cgatgccatt
       61 attcaactcc agtggtgact acaatcaacc gtatcccgca aaccttcgat cccgtatgaa
      121 attaaattac agttcttcga tgtcagatgc agatcgatcc gtttgagttc gcgctggagt
      181 tccaaacccg atataaaata aaatacgatt aatttttaaa tgatggttct gcattttgta
      241 tttaatcggc tatgtaaatc aatactaaga gggcataaca aatatttaag ctgaaattca
      301 aatcagcttg aatggctatg ttgctagggt tgtaaatgac cagtctccac attaattagt
      361 atggttgttc ttactaaaat ttccaaagaa gcttcaactt cttcaagcat ggcattcttt
      421 caataaaaac cggcaagtag ctcacgaaga ttctactaag gctgttttaa ccaatgatga
      481 ccattcgaaa agcggcttta atacttggtg tcagcattag ggtttgcgat tcagagaatt
      541 gacgatgtat atgagattct tgtatctcat atcagcaaat cgagagcaaa gactttacca
      601 aaaataaaat cgagagtaga gatttgacga agcaataggg ttcacgattc aattaggaat
      661 tagacttcaa caacgatcct gccatgtacc taccatgtag agatttatga cactagctac
      721 atgtgagttt ctgcataaac ttgatacaaa ttacttttat ccttactgag tatgatctga
      781 ctgatttgta atgggtcaag attcactatt cttcatcttt gccatttttg ataaattatt
      841 ggcgtagtgt gcctattaac taaatgacaa ggcgaaacca tcgacttcgt gtgctattat
      901 atgcaagtat ccagttatag ttataaacta agacccttct agctgcttca gcacatgttt
      961 cttttaaaaa catgtgcagg gggtaatggt ctcaatttac aaccaactga tattgtgatt
     1021 atatttgata ctgattggat tctgcagata gatcaacaag cagaggatca tgtgcatcgt
     1081 attttttcat tcaaacgttg tgtaaagtgt atgatttctt tatgcactca caatattgaa
     1141 atcggggcac cgttcatgct tattgtttgt ataaatgtaa tttaatactc cgtatttgat
     1201 atttatattt aaaattaatg gtttagttga cttctcttca tgcaggtcat ggttggttaa
     1261 ttgctaatat tagatagtat tttttttttg attcatgtgg tttgttgtgc acattatctt
     1321 atgatctcca ctactaacct tgtgtgagaa cactgtctca tttggatgct agagggaatg
     1381 tgaggttctc ttgcagttgc tacctcattt ggaggtaatg aagtcatcat attcttgtat
     1441 gatcattaaa gtgaattaaa caggattaac acttttatgt aatgtgttag gaggttctac
     1501 tcattaaact tggactttgg gcaactaaga tccgttagag gtaaaca
//
LOCUS       XR_011778728            1552 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904305), transcript variant X2, ncRNA.
ACCESSION   XR_011778728
VERSION     XR_011778728.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1552
                     /gene="LOC139904305"
                     /note="uncharacterized LOC139904305; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904305"
     ncRNA           1..1552
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904305"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904305"
ORIGIN      
        1 atctctctcc ctaaaattgt caaaaacaaa ttcaagacgg gtcagttttt cgatgccatt
       61 attcaactcc agtggtgact acaatcaacc gtatcccgca aaccttcgat cccgtatgaa
      121 attaaattac agttcttcga tgtcagatgc agatcgatcc gtttgagttc gcgctggagt
      181 tccaaacccg atataaaata aaatacgatt aatttttaaa tgatggttct gcattttgta
      241 tttaatcggc tatgtaaatc aatactaaga gggcataaca aatatttaag ctgaaattca
      301 aatcagcttg aatggctatg ttgctagggt tgtaaatgac cagtctccac attaattagt
      361 atggttgttc ttactaaaat ttccaaagaa gcttcaactt cttcaagcat ggcattcttt
      421 caataaaaac cggcaagtag ctcacgaaga ttctactaag gctgttttaa ccaatgatga
      481 ccattcgaaa agcggcttta atacttggtg tcagcattag ggtttgcgat tcagagaatt
      541 gacgatgtat atgagattct tgtatctcat atcagcaaat cgagagcaaa gactttacca
      601 aaaataaaat cgagagtaga gatttgacga agcaataggg ttcacgattc aattaggaat
      661 tagacttcaa caacgatcct gccatgtacc taccatgtag agatttatga cactagctac
      721 atgtgagttt ctgcataaac ttgatacaaa ttacttttat ccttactgag tatgatctga
      781 ctgatttgta atgggtcaag attcactatt cttcatcttt gccatttttg ataaattatt
      841 ggcgtagtgt gcctattaac taaatgacaa ggcgaaacca tcgacttcgt gtgctattat
      901 atgcaagtat ccagttatag ttataaacta agacccttct agctgcttca gcacatgttt
      961 cttttaaaaa catgtgcagg gggtaatggt ctcaatttac aaccaactga tattgtgatt
     1021 atatttgata ctgattggat tctgcagata gatcaacaag cagaggatca tgtgcatcgt
     1081 attttttcat tcaaacgttg tgtaaagtgt atgatttctt tatgcactca caatattgaa
     1141 atcggggcac cgttcatgct tattgtttgt ataaatgtaa tttaatactc cgtatttgat
     1201 atttatattt aaaattaatg gtttagttga cttctcttca tgcaggtcat ggttggttaa
     1261 ttgctaatat tagatagtat tttttttttg attcatgtgg tttgttgtgc acattatctt
     1321 atgatctcca ctactaacct tgtgtgagaa cactgtctca tttggatgct agagggaatg
     1381 tgaggttctc ttgcagttgc tacctcattt ggaggaggtt ctactcatta aacttggact
     1441 ttgggcaact aagatccgtt agaggtaaac ataactcgaa tagaatcatt tgtaattaaa
     1501 tgggttgaat ttaccacctc taagttatca attatgttgt gttacattat ta
//
LOCUS       XR_011778729            1222 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904305), transcript variant X3, ncRNA.
ACCESSION   XR_011778729
VERSION     XR_011778729.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1222
                     /gene="LOC139904305"
                     /note="uncharacterized LOC139904305; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904305"
     ncRNA           1..1222
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904305"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904305"
ORIGIN      
        1 atctctctcc ctaaaattgt caaaaacaaa ttcaagacgg gtcagttttt cgatgccatt
       61 attcaactcc agtggtgact acaatcaacc gtatcccgca aaccttcgat cccgtatgaa
      121 attaaattac agttcttcga tgtcagatgc agatcgatcc gtttgagttc gcgctggagt
      181 tccaaacccg atataaaata aaatacgatt aatttttaaa tgatggttct gcattttgta
      241 tttaatcggc tatgtaaatc aatactaaga gggcataaca aatatttaag ctgaaattca
      301 aatcagcttg aatggctatg ttgctagggt tgtaaatgac cagtctccac attaattagt
      361 atggttgttc ttactaaaat ttccaaagaa gcttcaactt cttcaagcat ggcattcttt
      421 caataaaaac cggcaagtag ctcacgaaga ttctactaag gctgttttaa ccaatgatga
      481 ccattcgaaa agcggcttta atacttggtg tcagcattag ggtttgcgat tcagagaatt
      541 gacgatgtat atgagattct tgtatctcat atcagcaaat cgagagcaaa gactttacca
      601 aaaataaaat cgagagtaga gatttgacga agcaataggg ttcacgattc aattaggaat
      661 tagacttcaa caacgatcct gccatgtacc taccatgtag agatttatga cactagctac
      721 atatagatca acaagcagag gatcatgtgc atcgtatttt ttcattcaaa cgttgtgtaa
      781 agtgtatgat ttctttatgc actcacaata ttgaaatcgg ggcaccgttc atgcttattg
      841 tttgtataaa tgtaatttaa tactccgtat ttgatattta tatttaaaat taatggttta
      901 gttgacttct cttcatgcag gtcatggttg gttaattgct aatattagat agtatttttt
      961 ttttgattca tgtggtttgt tgtgcacatt atcttatgat ctccactact aaccttgtgt
     1021 gagaacactg tctcatttgg atgctagagg gaatgtgagg ttctcttgca gttgctacct
     1081 catttggagg taatgaagtc atcatattct tgtatgatca ttaaagtgaa ttaaacagga
     1141 ttaacacttt tatgtaatgt gttaggaggt tctactcatt aaacttggac tttgggcaac
     1201 taagatccgt tagaggtaaa ca
//
LOCUS       XM_071886240             770 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides reticulon-like protein B9
            (LOC139904306), mRNA.
ACCESSION   XM_071886240
VERSION     XM_071886240.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..770
                     /gene="LOC139904306"
                     /note="reticulon-like protein B9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904306"
     CDS             28..675
                     /gene="LOC139904306"
                     /codon_start=1
                     /product="reticulon-like protein B9"
                     /protein_id="XP_071742341.1"
                     /db_xref="GeneID:139904306"
                     /translation="MSKSSSDSDHENTHQDTIKLKGYFHSIIGQGQVSDVLLWRNTRL
                     SASILLGVTAIWSLFEVYEYNIISFICHVSILAMLIIYITYAMAKYTQWDLPDFEEIT
                     IPESTFKWLYKKTNSLLLQFYYTASGEDITTFFLTMAFLWMISVIGSHFSSLNLLYLC
                     FLCIEILPALYERNEHEVDYLVNKGIRDMKHLMEQFGSNILNKIPRGKVKEKKHN"
     misc_feature    124..582
                     /gene="LOC139904306"
                     /note="Region: Reticulon; pfam02453"
                     /db_xref="CDD:460562"
ORIGIN      
        1 atttcgaacc ttgtttaact tgagaccatg tcgaaatctt cttccgattc agatcatgaa
       61 aatacacatc aagacacaat aaagctcaaa ggatattttc attccatcat tggacaaggg
      121 caggtatcag acgtgctatt atggagaaac acaagattat cggcgtcaat cttattaggt
      181 gtaactgcaa tatggtctct tttcgaggtt tacgagtata acatcatatc ttttatttgt
      241 cacgtttcaa tccttgccat gttgatcatt tacatcacat atgccatggc caaatatact
      301 caatgggatc ttcctgattt tgaagaaatc accatacccg aatcaacatt caaatggttg
      361 tacaaaaaaa caaatagttt gttacttcaa ttctattata cagcaagtgg agaagacatc
      421 actactttct ttttgacaat ggcattctta tggatgatat cagttattgg aagtcatttc
      481 agttcattaa atcttctcta cctttgcttt ctttgtatcg aaatcctacc ggctctttat
      541 gaacgaaatg aacacgaagt agattatctt gtaaataaag gaatcagaga tatgaaacat
      601 ctaatggagc aatttggttc taacatcctt aacaagatcc caagaggaaa agtgaaagaa
      661 aagaaacaca attaaatgat caattaatta accataccaa atttattgta ctatagtgtt
      721 tgagacattt acatgtgaca aatttatgta cataaataat tgctactgaa
//
LOCUS       XM_071886241            2269 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904307), transcript variant X1, mRNA.
ACCESSION   XM_071886241
VERSION     XM_071886241.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2269
                     /gene="LOC139904307"
                     /note="uncharacterized LOC139904307; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904307"
     CDS             142..2118
                     /gene="LOC139904307"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742342.1"
                     /db_xref="GeneID:139904307"
                     /translation="MVDANDKDETPKSNLKPEADVGQSVIAPSDIISKPDMNSDETEV
                     GVEVTDDMEEYEEEEEEDEDEEEEEEYEDEYEEDEEVEQKVNDEGLDTDKEREKEKIV
                     VEDATNKENDVKEDEEDEDEYEEEEDEKIEEKVTDEGLDMDKEREQEQGVVEDATNKE
                     NAVQEDDKIEQKVNDEGLYTDKEREKEQGVVEDATYKENVVKENEKNNEVPKSGDKLG
                     ENSKNNGKRRRLRNRNKKKDEQKAFSTNGEKDKDEKLDTNKEDGEKIEQNVNLDKEHE
                     KEQAVVEDATNKENTVKKEENNAEVPKIGVELGVNPKSNGKRPRPRNRNRNKKKDEQK
                     PYAANGEKPESSNKTKVEEKAPETLVADGDKQEASRRKKGSKRVESMGMVFMCTSKTK
                     SDCFRYKVLGLPGNKKDQVAKIYKGMRLFLFDVDLRLMYGIFKAAGPGGYNLEPKAFK
                     ADFPSQVRFTVLDDCLPLAEENFKGALKENYYSRNKFEGLLKADQVKNLCKLFLQMDR
                     GGAHPITPPNPHIIRPIENQKKRKMRARSPQVKERRYIDYVQPPVLYQREHPILYKHE
                     APVQRLYTHERPEHNTYNIYSREAPSYHDPVYTLPPPKYNLVSREYHPLGVPTQEYRL
                     SGSSTSYRNVGHPSEYRSSAVQLPGYRSQTHYRF"
     misc_feature    1282..1650
                     /gene="LOC139904307"
                     /note="Development and cell death domain; Region:
                     Dev_Cell_Death; pfam10539"
                     /db_xref="CDD:463141"
ORIGIN      
        1 acttcataca atttattgcg tctactcctc caacgaattt gttggttctc aaacctaaca
       61 ccatgtcatg tgtgtatata taaactttgt ttgcagatac aatttcaatt ataattccga
      121 tttctccaca tctctaggac gatggttgat gcaaatgata aagatgaaac tccgaaatcg
      181 aacttgaaac ctgaagccga tgtaggtcag tcagttatcg ctccatcgga tataatatct
      241 aagccagata tgaactctga cgaaactgag gttggggttg aagttacaga tgatatggaa
      301 gagtacgagg aggaggagga agaagatgaa gatgaagaag aagaagaaga gtacgaggat
      361 gaatacgaag aagatgaaga agtagaacaa aaggtaaatg atgaaggact tgatacggat
      421 aaagagcgag aaaaagaaaa gattgttgta gaagatgcaa ctaataagga aaatgatgtt
      481 aaagaagatg aagaggatga ggatgaatat gaagaagagg aagacgaaaa aatcgaagaa
      541 aaggttaccg atgaaggact cgatatggat aaagagcgcg aacaagaaca gggtgttgta
      601 gaagatgcaa ctaataagga aaatgctgtt caagaagatg ataaaataga acaaaaggtt
      661 aatgatgaag gactctatac agataaagag cgcgaaaaag aacagggtgt agtggaagat
      721 gcaacttata aggaaaatgt tgttaaagaa aacgagaaga ataatgaagt accaaagagt
      781 ggcgataaat taggtgagaa ttcaaagaat aatggtaaaa gacgtagact taggaatcga
      841 aacaaaaaga aggatgaaca gaaagcgttt tctactaatg gagaaaagga taaagatgag
      901 aaacttgata cgaataaaga ggacggtgaa aaaatagaac aaaatgtcaa tttggataaa
      961 gagcacgaaa aagaacaggc tgtagtagaa gatgcaacta ataaggaaaa tactgttaaa
     1021 aaagaagaaa acaacgccga agtaccaaaa attggcgttg aattaggtgt gaatccaaag
     1081 agtaatggta aaagacctag acctaggaat cgtaatcgaa acaaaaagaa ggacgaacag
     1141 aaaccgtatg ctgctaatgg agaaaagcca gaatcgtcta ataagacgaa ggttgaagaa
     1201 aaagcacccg agacattggt tgctgatgga gataaacaag aagcttctag aagaaagaag
     1261 ggttcaaaga gggttgagag catgggtatg gtgttcatgt gtacctcgaa gacaaaaagt
     1321 gactgttttc gttacaaggt ccttgggcta cctggaaata agaaggatca agtagccaag
     1381 atctataaag ggatgagact gtttctgttt gatgttgatt taaggttgat gtatgggatt
     1441 tttaaagctg ctggaccagg cggttataat cttgaaccga aagctttcaa ggccgacttc
     1501 ccatctcaag ttcgatttac tgtgctcgat gattgcttgc ctctagcaga agaaaatttt
     1561 aagggggccc ttaaagaaaa ttactactct cgaaataagt ttgaaggttt gctcaaggca
     1621 gatcaggtaa agaatttatg taaactcttt ctgcaaatgg accgaggagg tgcccatccc
     1681 ataactcctc ccaacccaca tataatccga cccattgaaa accaaaagaa acgtaaaatg
     1741 cgggcccgtt ctccacaagt taaagaaaga cgctacatcg actatgtaca accccctgtt
     1801 ttataccagc gtgaacaccc aattttatac aagcatgaag cccccgttca gaggttgtac
     1861 acccacgaaa gaccggaaca caacacgtat aacatataca gtagagaggc accttcatat
     1921 catgatcctg tctatacatt accaccacca aagtacaacc tcgtaagcag agagtaccac
     1981 cctcttggag tcccaacaca agagtatcgt ctttctggaa gctcgactag ttatcgtaat
     2041 gttgggcatc caagtgaata tcgttcttct gcagtgcaat tacctgggta tcgttctcaa
     2101 acacattacc gattttagtt tgtctatatc gaaattgtac tacaaatctg taatatttag
     2161 acttccttca tggacctcta gtttgtaact tgataccatt gcatagttgt tttttaagaa
     2221 gacattgtaa ataacgtgtc ctgttcggct gttctgtttc ttgattttt
//
LOCUS       XM_071886242            2419 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904307), transcript variant X2, mRNA.
ACCESSION   XM_071886242
VERSION     XM_071886242.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2419
                     /gene="LOC139904307"
                     /note="uncharacterized LOC139904307; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904307"
     CDS             274..2268
                     /gene="LOC139904307"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742343.1"
                     /db_xref="GeneID:139904307"
                     /translation="MSFCRTMVDANDKDETPKSNLKPEADVGQSVIAPSDIISKPDMN
                     SDETEVGVEVTDDMEEYEEEEEEDEDEEEEEEYEDEYEEDEEVEQKVNDEGLDTDKER
                     EKEKIVVEDATNKENDVKEDEEDEDEYEEEEDEKIEEKVTDEGLDMDKEREQEQGVVE
                     DATNKENAVQEDDKIEQKVNDEGLYTDKEREKEQGVVEDATYKENVVKENEKNNEVPK
                     SGDKLGENSKNNGKRRRLRNRNKKKDEQKAFSTNGEKDKDEKLDTNKEDGEKIEQNVN
                     LDKEHEKEQAVVEDATNKENTVKKEENNAEVPKIGVELGVNPKSNGKRPRPRNRNRNK
                     KKDEQKPYAANGEKPESSNKTKVEEKAPETLVADGDKQEASRRKKGSKRVESMGMVFM
                     CTSKTKSDCFRYKVLGLPGNKKDQVAKIYKGMRLFLFDVDLRLMYGIFKAAGPGGYNL
                     EPKAFKADFPSQVRFTVLDDCLPLAEENFKGALKENYYSRNKFEGLLKADQVKNLCKL
                     FLQMDRGGAHPITPPNPHIIRPIENQKKRKMRARSPQVKERRYIDYVQPPVLYQREHP
                     ILYKHEAPVQRLYTHERPEHNTYNIYSREAPSYHDPVYTLPPPKYNLVSREYHPLGVP
                     TQEYRLSGSSTSYRNVGHPSEYRSSAVQLPGYRSQTHYRF"
     misc_feature    1432..1800
                     /gene="LOC139904307"
                     /note="Development and cell death domain; Region:
                     Dev_Cell_Death; pfam10539"
                     /db_xref="CDD:463141"
ORIGIN      
        1 aaaagcacat tcatgaaaac ttcatggttg aaatacaatt aaaccgtgca ttgagaataa
       61 agtttggagc tttagacttg ctttaagtag gattcggatc tggctatatg agggtccaga
      121 tccaggtgta cctgtctgag gcgtcttagt gcttgattgt tttggttctg tttagtgcta
      181 ttagatctat atggttctgt attttcatac ttaacgatca ttgtgggtag tttcatcggt
      241 ggttagtgct caacgatttt tggtttcaca acgatgagtt tctgcaggac gatggttgat
      301 gcaaatgata aagatgaaac tccgaaatcg aacttgaaac ctgaagccga tgtaggtcag
      361 tcagttatcg ctccatcgga tataatatct aagccagata tgaactctga cgaaactgag
      421 gttggggttg aagttacaga tgatatggaa gagtacgagg aggaggagga agaagatgaa
      481 gatgaagaag aagaagaaga gtacgaggat gaatacgaag aagatgaaga agtagaacaa
      541 aaggtaaatg atgaaggact tgatacggat aaagagcgag aaaaagaaaa gattgttgta
      601 gaagatgcaa ctaataagga aaatgatgtt aaagaagatg aagaggatga ggatgaatat
      661 gaagaagagg aagacgaaaa aatcgaagaa aaggttaccg atgaaggact cgatatggat
      721 aaagagcgcg aacaagaaca gggtgttgta gaagatgcaa ctaataagga aaatgctgtt
      781 caagaagatg ataaaataga acaaaaggtt aatgatgaag gactctatac agataaagag
      841 cgcgaaaaag aacagggtgt agtggaagat gcaacttata aggaaaatgt tgttaaagaa
      901 aacgagaaga ataatgaagt accaaagagt ggcgataaat taggtgagaa ttcaaagaat
      961 aatggtaaaa gacgtagact taggaatcga aacaaaaaga aggatgaaca gaaagcgttt
     1021 tctactaatg gagaaaagga taaagatgag aaacttgata cgaataaaga ggacggtgaa
     1081 aaaatagaac aaaatgtcaa tttggataaa gagcacgaaa aagaacaggc tgtagtagaa
     1141 gatgcaacta ataaggaaaa tactgttaaa aaagaagaaa acaacgccga agtaccaaaa
     1201 attggcgttg aattaggtgt gaatccaaag agtaatggta aaagacctag acctaggaat
     1261 cgtaatcgaa acaaaaagaa ggacgaacag aaaccgtatg ctgctaatgg agaaaagcca
     1321 gaatcgtcta ataagacgaa ggttgaagaa aaagcacccg agacattggt tgctgatgga
     1381 gataaacaag aagcttctag aagaaagaag ggttcaaaga gggttgagag catgggtatg
     1441 gtgttcatgt gtacctcgaa gacaaaaagt gactgttttc gttacaaggt ccttgggcta
     1501 cctggaaata agaaggatca agtagccaag atctataaag ggatgagact gtttctgttt
     1561 gatgttgatt taaggttgat gtatgggatt tttaaagctg ctggaccagg cggttataat
     1621 cttgaaccga aagctttcaa ggccgacttc ccatctcaag ttcgatttac tgtgctcgat
     1681 gattgcttgc ctctagcaga agaaaatttt aagggggccc ttaaagaaaa ttactactct
     1741 cgaaataagt ttgaaggttt gctcaaggca gatcaggtaa agaatttatg taaactcttt
     1801 ctgcaaatgg accgaggagg tgcccatccc ataactcctc ccaacccaca tataatccga
     1861 cccattgaaa accaaaagaa acgtaaaatg cgggcccgtt ctccacaagt taaagaaaga
     1921 cgctacatcg actatgtaca accccctgtt ttataccagc gtgaacaccc aattttatac
     1981 aagcatgaag cccccgttca gaggttgtac acccacgaaa gaccggaaca caacacgtat
     2041 aacatataca gtagagaggc accttcatat catgatcctg tctatacatt accaccacca
     2101 aagtacaacc tcgtaagcag agagtaccac cctcttggag tcccaacaca agagtatcgt
     2161 ctttctggaa gctcgactag ttatcgtaat gttgggcatc caagtgaata tcgttcttct
     2221 gcagtgcaat tacctgggta tcgttctcaa acacattacc gattttagtt tgtctatatc
     2281 gaaattgtac tacaaatctg taatatttag acttccttca tggacctcta gtttgtaact
     2341 tgataccatt gcatagttgt tttttaagaa gacattgtaa ataacgtgtc ctgttcggct
     2401 gttctgtttc ttgattttt
//
LOCUS       XM_071886243            1417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein phosphatase 1
            regulatory inhibitor subunit PPP1R7 homolog (LOC139904308), mRNA.
ACCESSION   XM_071886243
VERSION     XM_071886243.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1417
                     /gene="LOC139904308"
                     /note="protein phosphatase 1 regulatory inhibitor subunit
                     PPP1R7 homolog; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139904308"
     CDS             49..1041
                     /gene="LOC139904308"
                     /codon_start=1
                     /product="protein phosphatase 1 regulatory inhibitor
                     subunit PPP1R7 homolog"
                     /protein_id="XP_071742344.1"
                     /db_xref="GeneID:139904308"
                     /translation="MEQTTANNPMNNEEESTQLTVLDATSYQLHDLDSIDFPPSLIEI
                     DLTANRLKKLDSRISNLSNLKKLSLRQNLFDDAGVDPISQWNAISGLEELVLRDNQLK
                     NIPDVSLFKTLLVFDVSFNEISSMSGLSKASSTLKELYVSKNEVSKIEEIEHLNELEI
                     LELGSNRLRVIENIHNMTKLQELWLGRNRIKSINLCGLKCIKKLSLQSNRLTSMKGLE
                     ECTSLEELYLSHNGITKMEGLSTLANLRVLDVSSNKLAAIEDIEKLTCLEDLWFNDNQ
                     LASLDCIAEAVSGSREKLTTIYLEHNPCAKSSDYLTILRQIFPNIEQIDSEVFA"
     misc_feature    <100..>816
                     /gene="LOC139904308"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SspH2; Region: PRK15387"
                     /db_xref="CDD:185285"
     misc_feature    103..168
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    169..237
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    238..297
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    319..384
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    454..519
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    463..978
                     /gene="LOC139904308"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     Region: PPP1R42; cl42388"
                     /db_xref="CDD:455733"
     misc_feature    520..585
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    586..648
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    649..714
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    715..780
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    781..846
                     /gene="LOC139904308"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 tcgcccgttt cgtacatcat tttctagggt ttcataaatg cagtttcaat ggaacaaaca
       61 acagctaaca atccaatgaa caacgaagaa gaatcaacac agctaactgt cctcgacgcc
      121 accagttatc agcttcatga tctcgactca atcgacttcc caccgagcct gatcgaaatc
      181 gatttgaccg caaatcgatt aaagaagtta gattcacgta tatctaattt atcaaatctc
      241 aaaaaattgt ctcttcgtca aaatctcttc gatgatgcag gtgtcgaccc gatttctcag
      301 tggaacgcca tttctggact cgaggaatta gttctcaggg ataaccagct gaagaatatt
      361 cccgatgtta gcttatttaa aacccttttg gtatttgatg tttcgttcaa tgaaatttcg
      421 tcaatgagtg gactgtcaaa ggcatcaagc acactcaagg aactctatgt ctcaaaaaat
      481 gaagtttcaa aaattgagga gattgagcac ctcaatgaac tcgaaattct tgaacttggt
      541 tccaaccgat tacgggtgat cgagaatata cacaacatga caaaattaca agagctgtgg
      601 ttaggtcgca atcgtataaa atccatcaac ttatgcgggt taaaatgcat taagaagctc
      661 agtttgcaaa gcaatcgact aacttctatg aaagggttag aggaatgtac ttctttagaa
      721 gaactatact tgagccataa tggtattaca aaaatggaag gcttatcaac cctggccaac
      781 ctgcgtgtgt tggatgtttc ttcaaataaa ctcgcagcaa ttgaagacat tgagaaactt
      841 acatgtttag aagatctatg gtttaatgac aatcagctgg catcattaga ttgcattgct
      901 gaggctgttt ctggatcgag agagaagctc accactatct atcttgagca caatccatgt
      961 gcaaaatctt cagactattt gactattctg agacaaatct tcccaaatat tgagcaaatc
     1021 gattcagaag tgtttgctta gatcagaagc atttggtatc agagtttagg aacacaagct
     1081 tggactcatg attagtttat aaaatctccg tgaaatcata catagaagta caatgatgtt
     1141 accctcgtta caaactgaaa gaatctcaag attgatataa agaatgatgg accctttgaa
     1201 cgattgttaa ttgcccgctg tttgaagatt aaacaaagat tgtggtcttc attgatatct
     1261 gaaaaacttt ctaaatgtaa tgtaaagaaa accattcact tatattatac ttcttttaag
     1321 atcatttgaa tgtactaagc agtgaggtgg aatgttttat ttgcatatgt attaaaatga
     1381 ctcgctttct tagaaagcgc atgaaagaca ttttaaa
//
LOCUS       XM_071886244             609 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitochondrial import inner
            membrane translocase subunit TIM17-2-like (LOC139904309), mRNA.
ACCESSION   XM_071886244
VERSION     XM_071886244.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..609
                     /gene="LOC139904309"
                     /note="mitochondrial import inner membrane translocase
                     subunit TIM17-2-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 21 Proteins"
                     /db_xref="GeneID:139904309"
     CDS             1..609
                     /gene="LOC139904309"
                     /codon_start=1
                     /product="mitochondrial import inner membrane translocase
                     subunit TIM17-2-like"
                     /protein_id="XP_071742345.1"
                     /db_xref="GeneID:139904309"
                     /translation="MGTPESSREPCPDRILDDVGGAFAMGAVGGSAFHFIKGTYNSPA
                     GQRILGGVDAVRINAPRIGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIFAGAATGGV
                     LAMRQGFMSATRSAFFGGVLLALIEGAGITMNRIMSAQQQMPIMIEGEPESSGSQMPE
                     KSNFSGWFQDMFGGKEEEVKPSVKTEVLESFDTPPPAPTFDF"
     misc_feature    19..483
                     /gene="LOC139904309"
                     /note="Mitochondrial import inner membrane translocase,
                     subunit TIM22 [Posttranslational modification, protein
                     turnover, chaperones]; Region: TIM22; cl02381"
                     /db_xref="CDD:470560"
ORIGIN      
        1 atgggtaccc cagaaagctc acgcgaacca tgccctgaca gaatcctcga cgacgttggc
       61 ggcgcgttcg ctatgggcgc cgtcggcggc tccgctttcc actttattaa aggcacatac
      121 aattcaccgg ctggtcaacg tattcttgga ggtgttgacg ccgttcgtat aaacgcacca
      181 cgtatcggcg gatcattcgc cgtatggggc ggtttattct cagcgtttga ttgcacgatg
      241 gtgtacgctc gtcagaaaga agatccgtgg aattcgattt tcgccggtgc ggctaccgga
      301 ggtgtgttag cgatgagaca agggtttatg tccgcaacta gatctgcgtt ttttggggga
      361 gtgttgttgg ctttgattga aggtgctgga attacgatga ataggattat gagtgcacaa
      421 caacagatgc cgattatgat tgagggtgag ccggagagtt cgggatctca gatgccggaa
      481 aagtctaatt tcagtgggtg gtttcaggat atgtttggtg gtaaggaaga ggaggtgaaa
      541 ccttctgtga aaactgaagt tttggagagt tttgatacac caccacctgc gccaacgttt
      601 gatttttag
//
LOCUS       XM_071886245            1916 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides hexokinase-1-like
            (LOC139904310), mRNA.
ACCESSION   XM_071886245
VERSION     XM_071886245.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1916
                     /gene="LOC139904310"
                     /note="hexokinase-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     Proteins"
                     /db_xref="GeneID:139904310"
     CDS             207..1700
                     /gene="LOC139904310"
                     /codon_start=1
                     /product="hexokinase-1-like"
                     /protein_id="XP_071742346.1"
                     /db_xref="GeneID:139904310"
                     /translation="MGKVTVAAAVVCATAVSTAAVLVVRHRMKNSGKWGKAMEILKEL
                     EDKCGTPVAKLRQVADAMVVEMHAGLASDGGSKLKMLISYVDNLPTGDETGIFYALDL
                     GGTNFRVLRVKLGGVENVKKEFVEVQIPPNLMIGKCEDLFDFIAGELAKFVATEGDNM
                     QIPPGTQRELGFTFSFPVKQSSIAGGTLVRWTKGFNIEDAVGQDIVEELTKAMERVGL
                     DMRVSALVNDTVGTLAGGRYSSNDVIASVILGTGTNAAYVERANAIPKWQGLLPRSGE
                     MVINMEWGNFRSSHLPLTEFDESLDTDSLNPGEQIFEKIISGMYLGEIVRLVLLKMAV
                     EAEFFGDTVPSKLEKPFILRTPVMSAMHHDSSADLSVVATKLKDILEISNTSLKLRKV
                     IVRVCDIVATRGARLSAAGILGILKKIGRDTVNEGDENQKSIIAMDGGLFEHYIEFRD
                     AMQCAMNELLGDTSKNIIIELSNDGSGLGAALLAASHSQYREYSEST"
     misc_feature    207..1691
                     /gene="LOC139904310"
                     /note="hexokinase; Region: PLN02914; cl42853"
                     /db_xref="CDD:456198"
     polyA_site      1916
                     /gene="LOC139904310"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atactcctat gtttttataa gatttccaat ttcccatttc gcattttctt gatttgacta
       61 tgtaattata ctcacaaatc aaattcagtc aagttcaaat cttatttcat ctaatctaaa
      121 catcaaaaaa atcaaaacgg tatcttaaat cttgtaattt acatattttc ttcgatctgt
      181 gtgtgtaagc tgttaaattt gataatatgg gtaaagtaac ggtggcggcg gcggtggtgt
      241 gcgccactgc tgtttctacg gcggctgtat tggtggtccg tcaccggatg aagaattccg
      301 ggaagtgggg aaaggctatg gagatattaa aagagttgga agataaatgt ggaactccgg
      361 ttgcaaaact ccggcaggtg gctgacgcca tggtggttga gatgcacgcc ggacttgctt
      421 ccgacggcgg cagcaagctc aagatgttaa tcagctatgt tgacaatctt ccaactgggg
      481 atgaaacggg aatattttat gctcttgacc ttggtggtac aaacttccgt gtgcttcgtg
      541 tgaagttggg tggagtagaa aatgtaaaga aagaatttgt agaagttcaa attcctccaa
      601 atctcatgat cgggaaatgt gaagatttgt ttgattttat tgctggagaa cttgcgaaat
      661 ttgtggcaac ggagggggac aatatgcaga ttccacctgg cacacaacgg gaacttgggt
      721 ttactttttc atttcccgtc aaacaatcgt caattgcagg aggaactctt gttagatgga
      781 caaaaggctt caatatcgaa gatgcagttg ggcaggacat cgtagaagag ttgacaaaag
      841 ccatggaaag ggttggactc gatatgcgtg tttccgcatt ggtcaatgat acagttggga
      901 cgttagcagg agggagatat agtagcaatg atgtaattgc ttcagtgata ttaggtaccg
      961 gaactaatgc agcctatgtg gaacgtgcaa acgcaatccc caaatggcaa ggtctacttc
     1021 ctagatccgg agagatggtt ataaacatgg aatggggcaa cttccgatca tcacatcttc
     1081 ctttgacaga gtttgatgaa agtcttgaca ctgatagctt aaaccctggg gagcagattt
     1141 ttgagaagat aatttctgga atgtatttgg gagaaatcgt gaggctagtc ttgttgaaga
     1201 tggcggtaga agcagagttt ttcggtgata ccgtgccgtc taaacttgaa aagcccttca
     1261 tattgaggac cccggttatg tctgcgatgc atcatgactc gagtgctgac ctcagcgttg
     1321 tggcaaccaa gttgaaagac atacttgaga tatcaaacac ttctctaaag ttgagaaaag
     1381 taattgtgag agtatgtgat attgtggcaa ctcgcggtgc tcgtctctca gctgccggaa
     1441 ttttgggaat tctcaaaaaa atcggaagag atactgttaa tgaaggtgat gaaaaccaga
     1501 aatccatcat agcgatggat ggtggtttgt ttgaacatta cattgaattc agagacgcaa
     1561 tgcaatgtgc tatgaacgag ttgttaggtg acacttctaa aaacatcatt atcgagctat
     1621 ctaatgatgg ttcgggcctt ggggctgctc ttcttgctgc ctctcattcc cagtatcgag
     1681 aatactccga gtccacatag acttgtatcg tttttgtaca attggttttg ggattatggt
     1741 tttcaggaac tttttggtgt cttatatttg tttacaagag tcctcataag ttatgaggta
     1801 tgtaacatac aattatatgt tgttttaata tgtattagcg aataaagtga aagaatggtc
     1861 tgtgtactgc aatcgccttc acaatgagcc ttaattgaaa cataaagttg ttgagt
//
LOCUS       XM_071886246            1524 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable pectinesterase 53
            (LOC139904311), mRNA.
ACCESSION   XM_071886246
VERSION     XM_071886246.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1524
                     /gene="LOC139904311"
                     /note="probable pectinesterase 53; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139904311"
     CDS             14..1156
                     /gene="LOC139904311"
                     /codon_start=1
                     /product="probable pectinesterase 53"
                     /protein_id="XP_071742347.1"
                     /db_xref="GeneID:139904311"
                     /translation="MAKFVHIFSLIILLIVLNSTTPTFCHTKGLKPNRNTWKQFGVNL
                     TQTQYSEQQFMKWVNFVGTLNHSLFSTAKNKLFPSYTLTVDRNPATGDFTTIQGAIDS
                     LPFVNLIRVVIKVHAGVYKEKVNVPPLKSFITIEGAGADKTIVQWGDTAQTIGPKGQP
                     IGTYGSATFAVNSPYFIAKNITFQNTTPVPKPGAIGKQAVAFRISADTAAFVGCRFLG
                     AQDTLYDQLGRHYYKECYIEGSVDFIFGNGLSLFEGCQVHAIAPVTGAVTAQGRGSLL
                     EDTGFSFLRCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTV
                     YYGQYKCSGPGATFAGRVSWSRELTDEEAKPFLSLSFIDGSEWIKL"
     misc_feature    14..1153
                     /gene="LOC139904311"
                     /note="pectinesterase family protein; Region: PLN02682"
                     /db_xref="CDD:215367"
ORIGIN      
        1 cacatacatt ttcatggcca aatttgtgca cattttctcc cttatcattc ttttaattgt
       61 gcttaactct actacaccaa cattttgtca taccaaaggc ttgaaaccaa atagaaacac
      121 atggaaacaa ttcggggtca atttgaccca aacccaatat tcagaacaac aattcatgaa
      181 gtgggtcaat tttgttggaa ctttaaatca ttcccttttt tccaccgcca aaaacaagct
      241 ttttccttct tataccctca ccgttgatcg gaaccctgca accggagact ttactaccat
      301 tcaaggagct attgattctc tcccttttgt caatcttatt agagttgtca ttaaagttca
      361 tgcaggagtc tacaaggaga aggtaaatgt gcctccactg aaatcattca taacaataga
      421 aggggcaggt gcagacaaaa caattgttca atggggtgac acggctcaaa ccattggacc
      481 caaaggtcaa cccattggca cctatggctc agccactttt gctgtcaatt ccccttattt
      541 cattgccaaa aacatcacat ttcagaacac gacaccggtg ccaaaaccag gggctatagg
      601 caaacaagcg gtagcgttta ggatatcagc agatacagcc gcatttgtgg ggtgtagatt
      661 tttgggtgca caagacacac tttatgatca attgggtagg cattattaca aagagtgtta
      721 cattgaaggt tctgtggatt tcatttttgg caacggtctc tcccttttcg aggggtgtca
      781 agtgcacgca atagcaccgg taacaggggc tgtaacggca caaggaagag gtagtttact
      841 agaggacacc gggttctcat tcttgagatg taaggtcaca gggtcgggtg cgctttatct
      901 tggtagggca tgggggccgt tttcaagggt cgtgttcgcc tatacgtaca tggataacat
      961 tattatccca aaaggctggt acaattgggg tgacccaaac cgtgaaatga ctgtgtatta
     1021 tggacaatat aaatgtagtg gaccaggggc aacatttgca ggaagagtgt catggtcaag
     1081 agaactcact gacgaagaag ctaagccttt cctctcactt agctttattg atggttctga
     1141 atggatcaaa ttgtgacgag tttatcacat aaactttttt gtatatagtt aaatacagca
     1201 ataatctttt tttgttgatt ttcttaaagt cttcttttgg gttgaggaag ttgaaataca
     1261 gacaacaaat cgaccatcac ccaagtcgat tatgatgtta gattgtgtac ctcctaacaa
     1321 gtctatatct aaagttcatt cggaggtcaa cgaatgtgat cggatttgga ccctcgtata
     1381 tccttctcat gtcgatttta gcacagttga aggatatggg attgagtgag ataaagtatt
     1441 tacatcaaat aatataattt atcaagtgtg ttttttcata tgggttgatt tgtgttttat
     1501 tttggtttga aagttgacat tagt
//
LOCUS       XR_011778730             970 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904312), ncRNA.
ACCESSION   XR_011778730
VERSION     XR_011778730.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..970
                     /gene="LOC139904312"
                     /note="uncharacterized LOC139904312; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904312"
     ncRNA           1..970
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904312"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904312"
ORIGIN      
        1 tcaccagata atcggaaaaa cacacacaca tatccgaccg tcgcatctcc gtcactctct
       61 ccggcgatat acaaagacta ccgccatctc atttcactgg attgaggaaa tacttgcatt
      121 agtacagtcc ctgcttcatt atgaacatga tgccatatag tcttttctgg aaagtggaga
      181 ctaggatcaa ccaatttatc agttggttac atgttttatt gtctaggtga cgatgggtat
      241 ggatcgtttt gttctaagca ctgtggtata tgtcaaacaa ggctccatgg cctgccaata
      301 tatgatgaaa tttacaaggc aaaggcattg ggatcatcaa aaaactagaa aagatgacca
      361 cgactgggga ttggatttgt ggcaaatgcc agcacaacaa cttttattgg agaaacaaat
      421 gtcaaagatg caatgaggca tggctgccca taatcaggac ccgcccatat gaacctgtta
      481 gtagaatccc ttgctataag ccgggagact ggttatgtaa tgttaagttc tgtggggctc
      541 acaactatgc ttttcgcatg ttctgctata aatgtggtac atttaagaac atgcaaaacg
      601 caactgaaat cgttggattc cataacctcg ttaatccaat gagtcccgtt gtttatgttg
      661 tgaagagtct taaactcgct cgtcgagggt ggaagcctgg agactggttt tgcggcaggg
      721 ttgagtgcat ggcgcacaac tttgattcgc ggttgacttg tttcaagtgc ggttcgtctc
      781 gggaattgac caacaatcca tttttgaggg caatgattag caacacatcc gtgtaatctc
      841 actgcatatc aggctgttta gcatgttgaa actttgactt tgggttgttg ctctgaccat
      901 tttgtttctg ctatatacat tcctatctta tcttatggtt tcttcttatt gatggtaaaa
      961 gactttgaat
//
LOCUS       XM_071886247            1305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitogen-activated protein
            kinase kinase 6 (LOC139904313), mRNA.
ACCESSION   XM_071886247
VERSION     XM_071886247.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1305
                     /gene="LOC139904313"
                     /note="mitogen-activated protein kinase kinase 6; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139904313"
     CDS             64..1128
                     /gene="LOC139904313"
                     /codon_start=1
                     /product="mitogen-activated protein kinase kinase 6"
                     /protein_id="XP_071742348.1"
                     /db_xref="GeneID:139904313"
                     /translation="MKGMKPLKQLKLSVPAQKAPITSFLTASGTFHDGDLLLNLKGLR
                     LASDDKTDSPTDAKEIDLQFSLEDLETIKVIGKGSGGVVQLVRHKWIGRLFALKVIQM
                     NIQEDIRKQIVQELKINQASQCPNIVVCYHSFYHNGAISLVFEYMDRGSLTDVIRQLK
                     TILEPYLAVLCKQVLQGLVYLHHDRHVIHRDIKPSNLLVNQKGEVKITDFGVSAMLAS
                     SIGQRDTFVGTYNYMSPERISGKAYDYKSDIWSLGLVILECAIGRFPFIQSEDQQSWP
                     TFYELLDAIVSKPPPTAPSDQFSPEFCSFVSACIQKDPKDRSTALDLLSHPFIKKFED
                     KDIDFGILVSSLEPPINFSK"
     misc_feature    262..1062
                     /gene="LOC139904313"
                     /note="Catalytic domain of Plant dual-specificity
                     Mitogen-Activated Protein Kinase Kinases and similar
                     proteins; Region: PKc_MAPKK_plant_like; cd06623"
                     /db_xref="CDD:132954"
     misc_feature    order(286..300,310..312,349..351,355..357,445..447,
                     493..504,511..516,523..525,634..636,640..651,655..657,
                     685..690,697..699,739..750,754..756,835..837,862..864)
                     /gene="LOC139904313"
                     /note="active site"
                     /db_xref="CDD:132954"
     misc_feature    order(286..300,304..306,310..312,349..351,355..357,
                     445..447,493..504,511..516,520..525,640..642,646..651,
                     655..657,688..690)
                     /gene="LOC139904313"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:132954"
     misc_feature    order(295..300,634..636,640..648,697..699,739..750,
                     754..756,835..837,862..864)
                     /gene="LOC139904313"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:132954"
     misc_feature    order(685..729,736..756)
                     /gene="LOC139904313"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:132954"
ORIGIN      
        1 tgcactcccc tagtcccctt tccatttcac acacggaaac cctaatttag tacagtagca
       61 ccaatgaaag ggatgaagcc attgaagcag ctcaagcttt ctgttccagc tcaaaaggct
      121 ccaattacta gtttcttgac agcaagtgga acctttcatg atggtgattt acttctaaat
      181 ttgaaaggat tgaggctcgc atcagatgac aagacagata gtcccacaga tgccaaggag
      241 attgatctgc aattttcatt ggaggacctt gagaccatca aagttattgg aaaaggaagt
      301 gggggtgttg ttcagttggt tcggcataaa tggattggga gattgtttgc tctgaaggta
      361 atccagatga acatacagga ggatatacgt aaacagattg tgcaagagct taagattaat
      421 caagcatctc aatgccctaa catcgttgtt tgttatcact ctttttacca caatggagcc
      481 atctctttgg tttttgaata catggatcga ggatctttga cagacgtgat taggcaactc
      541 aagacaattc ttgaaccgta tcttgcagtt ctttgcaaac aggtattgca gggactggta
      601 tatttgcatc atgatagaca tgtaatccat agggatatta aaccatctaa tctacttgtt
      661 aaccaaaaag gggaagttaa gattacagat tttggcgtaa gtgcaatgct tgctagctct
      721 ataggtcaac gagatacatt tgttggaacc tataattata tgtcgccgga gagaataagt
      781 gggaaggctt atgattataa aagtgacatt tggagtttgg gcctagtgat ccttgagtgt
      841 gctatagggc gatttccatt catacaatct gaagatcaac aaagttggcc aactttttat
      901 gagcttttgg acgccattgt ctcaaaacca cctcctactg ctccatcaga tcagttttct
      961 cctgagttct gttcatttgt ctccgcctgc atacaaaaag atcctaaaga cagatccaca
     1021 gctctagatc ttttgagtca cccgttcatt aagaaatttg aggacaagga tattgatttt
     1081 ggaattctgg ttagtagctt ggaaccccct ataaattttt caaaataaac tatactgtac
     1141 caagaattca ttgtataatg catcctctga atatgtacta ttagttttta caattcaaaa
     1201 gtacttccct gtagtatttc acaagttctt atgagatata gaacatatgt ttaattgcat
     1261 tcaatcttga gatatgcgtt gcaaatgtta cagaattgaa atttt
//
LOCUS       XM_071886248             967 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides profilin-2 (LOC139904314),
            mRNA.
ACCESSION   XM_071886248
VERSION     XM_071886248.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..967
                     /gene="LOC139904314"
                     /note="profilin-2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 81 Proteins"
                     /db_xref="GeneID:139904314"
     CDS             131..526
                     /gene="LOC139904314"
                     /codon_start=1
                     /product="profilin-2"
                     /protein_id="XP_071742349.1"
                     /db_xref="GeneID:139904314"
                     /translation="MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGSIWAQSSSFPQVQP
                     EEIAAIMKDFDEPGTLAPTGLYLGGTKYMVIQGEAGAVIRGKKGPGGVTVKKTTMSLI
                     IGVYDEPMTPGQCNMIVERLGDYLLEQGF"
     misc_feature    131..514
                     /gene="LOC139904314"
                     /note="Region: Profilin; pfam00235"
                     /db_xref="CDD:459724"
     polyA_site      967
                     /gene="LOC139904314"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atctctaatt tcgattcgat atactccgta taaacatata aatcttcccc aaactccatc
       61 tcactattat cgaactttca accactaaca tcatttcaac agcgttaatc ggaaatagta
      121 tcaaaacaag atgtcgtggc aagcgtacgt tgatgaccac ttgatgtgcg agatcgaagg
      181 aaatcatctc tcagctgctg ctatcatcgg tcatgatggc agcatctggg cccaatcatc
      241 cagtttccct caggttcagc cagaggaaat agctgctatc atgaaggact ttgatgaacc
      301 tggcacactt gcaccaactg gtttatacct tggtgggacc aagtatatgg ttattcaagg
      361 tgaggcagga gctgtgattc gagggaaaaa gggacctgga ggtgttactg ttaaaaagac
      421 gacaatgtcc ttgatcattg gtgtctatga tgaacccatg actccaggcc aatgcaacat
      481 gattgttgaa aggcttggtg actatctcct cgaacagggt ttttaatttg cttttgtacg
      541 tctacggtcc tctcagttta ttctttatta tttttagatt tggcaaaatg ggtggggcag
      601 gcggtttggg taatggctca aaacgaattt gggtcgaaac atatgcttta tagttcgctt
      661 tgtgatgacc acctaaagtt catattgatg attcggtcgg gcctaatttg gcaatttgga
      721 ttgatttgca gggacctgat acattactag taattattgt gaaaaggcac atggagttgt
      781 aagccaggtg ctttgataaa actactttgg aattgatcag acattaccct tgtattatac
      841 tttttcataa tcagtgtgat ggaagtggga cacttgttta ctttcttctt ttatattctg
      901 gagtgttttt gatggatgat ttaaatggtt tgaaaattaa tatgaataca cctttgcttg
      961 tgcaaca
//
LOCUS       XM_071886249             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides profilin-1-like
            (LOC139904316), mRNA.
ACCESSION   XM_071886249
VERSION     XM_071886249.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139904316"
                     /note="profilin-1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 55 Proteins"
                     /db_xref="GeneID:139904316"
     CDS             134..535
                     /gene="LOC139904316"
                     /codon_start=1
                     /product="profilin-1-like"
                     /protein_id="XP_071742350.1"
                     /db_xref="GeneID:139904316"
                     /translation="MSWQTYVDDHLMCDIDGSGQHLSSAAIFGTDGTVWAKSSSFPEY
                     KPEEINAIIKEFNDPGNLAPTGLFLAGAKYMVIQGEPGAVIRGKKGAGGICIKKTAQA
                     MVFGIYDEPVAPGQCNMVVERLGDYLADQGM"
     misc_feature    134..523
                     /gene="LOC139904316"
                     /note="Region: Profilin; pfam00235"
                     /db_xref="CDD:459724"
ORIGIN      
        1 aactcatcat aatcaccgca tctcttgaaa tcaacaattt aaatctcaca tttcctctcc
       61 attctcacac ttgcaaatct ccaaacacat attcacacca acaaacaaaa cataaacata
      121 taacagtttg aaaatgtcgt ggcaaactta cgttgatgac catttgatgt gtgacatcga
      181 tggcagcggt cagcatcttt cctctgccgc tatctttggt accgatggta ccgtttgggc
      241 taagagctct tccttccctg agtataaacc tgaggagatt aatgctatta tcaaagaatt
      301 caatgatccg ggtaatcttg cccctactgg tttattcctt gctggtgcaa agtacatggt
      361 gatccaaggt gagcctggag ctgtcattcg tgggaagaag ggagctggtg ggatctgcat
      421 caagaaaact gctcaagcca tggtgtttgg catatatgac gaaccagtgg ctccaggcca
      481 atgcaacatg gttgtggaaa ggttgggtga ttatcttgcc gatcagggca tgtaatcatc
      541 gtacatcata tctcgtcatt caactacttc ctttctgatg ttccttggtt t
//
LOCUS       XM_071886250             957 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides derlin-1-like
            (LOC139904317), mRNA.
ACCESSION   XM_071886250
VERSION     XM_071886250.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..957
                     /gene="LOC139904317"
                     /note="derlin-1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139904317"
     CDS             73..795
                     /gene="LOC139904317"
                     /codon_start=1
                     /product="derlin-1-like"
                     /protein_id="XP_071742351.1"
                     /db_xref="GeneID:139904317"
                     /translation="MSSPAEFYNSLPPITKAYSTLCLAATTLATLKLLPVYYIALIYE
                     EVFYRFQVWRLLTNFIFLGPFSINFGIRLLMILRYGVQLENGPFKGRTADFLWMMIFG
                     SSTLLVLAAVPLFESYFMGVSLVFMLLYVWSREFPTANINIYGLVQLKAFYLPWAMLA
                     MDVIFGSPIGPDLCGILAGHLYYFLTVLHPLAGGKNMLQTPLWLLKIVGRYRIGAPVN
                     TQTQTTTNTSGVFRGRSYRVGG"
     misc_feature    103..675
                     /gene="LOC139904317"
                     /note="Rhomboid family; Region: Rhomboid; cl21536"
                     /db_xref="CDD:451297"
ORIGIN      
        1 cgcataatct atttcgttct ttcttttttc atcaagaaat aacccaggca acactgcaac
       61 atcaccgctc aaatgtcatc tcccgcggaa ttttacaatt cactcccacc tataaccaag
      121 gcttatagca ccttatgctt ggcggccaca acactagcca cattaaagct attacctgtt
      181 tattatattg cattgatcta tgaagaagta ttctatcgct ttcaggtatg gaggctgctt
      241 acaaacttca tctttcttgg ccctttctct ataaactttg ggatccgttt gttaatgata
      301 ttaagatatg gagttcagtt ggagaatggg ccttttaaag ggcgtacagc agactttttg
      361 tggatgatga tatttgggtc atcaacactt ctggtcttag cagccgttcc tttattcgaa
      421 tcctacttta tgggggtatc actggtgttt atgctcctct acgtttggag cagggaattt
      481 ccaactgcta atatcaacat ttatggcctc gtacaactta aggcatttta tttgccatgg
      541 gccatgcttg ctatggatgt catttttggt tcaccaattg ggcctgatct gtgtggtatc
      601 ttagccggcc atttatatta cttcttaacc gtcctgcatc ctttggctgg aggaaagaac
      661 atgttgcaga ctccattgtg gttactgaaa atcgttggga ggtacagaat tggagctcca
      721 gtaaataccc aaactcagac aaccaccaat accagtgggg tctttagagg aagatcttac
      781 agggtcggag gatgatttta attttattta gtaatttttt taatatgcat caaatttgaa
      841 ggcatttgca cactaatcta cagtaggaaa atgtaatatt gattcaatct tgtgtgatgg
      901 atctatagag aaagatttgg aacatgtaca ttttcactta gttttttcgt ctgtggc
//
LOCUS       XM_071886251            2093 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAC domain-containing
            protein 75-like (LOC139904318), transcript variant X1, mRNA.
ACCESSION   XM_071886251
VERSION     XM_071886251.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2093
                     /gene="LOC139904318"
                     /note="NAC domain-containing protein 75-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139904318"
     CDS             106..1515
                     /gene="LOC139904318"
                     /codon_start=1
                     /product="NAC domain-containing protein 75-like isoform
                     X1"
                     /protein_id="XP_071742352.1"
                     /db_xref="GeneID:139904318"
                     /translation="MNRVDQTRMNISSSDLIDAKLEEHQLCGSKHCPGCGHRLEGKPD
                     WVGLPAGVKFDPSDQELIEHLEAKVEAKNFKSHPLIDEFIPTIEGEDGICYTHPEKLP
                     GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVLVNQKQK
                     GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGLHEEEREGELVVSKIFYQTQPRQCNWS
                     ERASNNNVLSNVIAINEGVSNEMNRRDSRSGSGSCSSSKEINITATTASTHNNMDELS
                     AVSVSAVMSSYNPMDQMQHLKGVDHFSFVPFRKSFDEVGTTGGEASTGREIGITCDEQ
                     DLQRQQQQLHMTQQQMPHQHQMSAAGFHVSRPTHSVSTLISPHPHSHPLHHTSINMID
                     EDSFHASRIMSNFQEQEHHHHKMGGGRSTSGLEELIMGCTPSSSTDLKEESSNTNHSE
                     ADWLKYSTFWPDPDSQDHH"
     misc_feature    250..675
                     /gene="LOC139904318"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
ORIGIN      
        1 attggtatta tcaattaatt attatacata tacatatata atatcagatt ttaggtgata
       61 tgatacgatg atgaagttga gttaagttga ttggtgttta attaaatgaa tagagtggat
      121 caaacaagaa tgaatattag cagctctgat ctgattgatg caaagcttga agaacatcaa
      181 ttatgtggat ccaaacactg tccaggttgt ggtcatcgcc ttgaaggaaa accggattgg
      241 gttggtctac cagctggagt aaagtttgat ccatctgacc aagaattaat tgaacatctt
      301 gaagccaaag ttgaagccaa gaacttcaaa tctcatccgt tgattgacga gttcattcct
      361 acaattgaag gtgaagatgg gatttgttat acacatcctg aaaagcttcc aggagttaca
      421 agagatggat tgagtagaca ttttttccat cggccttcga aggcttacac aacggggaca
      481 agaaaaagaa gaaagatcca aaccgaatgt gatctacaag gtggggagac tcgttggcac
      541 aaaactggca aaactcgacc agttttggtt aatcaaaagc aaaaagggtg caagaaaatt
      601 ttagtactct acacaaactt tggtaagaac cgaaaaccag aaaagaccaa ttgggtaatg
      661 catcaatacc atcttggact gcacgaagag gagcgtgaag gcgagcttgt ggtgtcaaaa
      721 atattttatc aaactcaacc acgacaatgc aattggtccg aaagggctag taacaataat
      781 gttttatcga atgttatagc cattaatgaa ggggttagta acgaaatgaa tagaagagat
      841 agtagaagcg gaagtggtag ttgttcttcg tctaaagaaa tcaacataac tgcaacaacc
      901 gcttctactc ataataatat ggacgaactt tcggcagtta gtgttagtgc cgttatgtca
      961 agttacaatc caatggatca aatgcaacat ctaaaaggtg ttgatcattt tagctttgtc
     1021 ccgtttcgaa agagcttcga tgaggtgggt acaactggag gtgaggcatc aaccggaaga
     1081 gaaataggta tcacgtgtga tgagcaagac ctacaaaggc agcagcaaca gcttcacatg
     1141 acgcaacaac agatgccaca tcagcaccaa atgtcagccg ctggtttcca cgtcagccgg
     1201 ccaactcatt ctgtatcaac tctcatatcg ccacatccac attcacatcc acttcatcat
     1261 acctctatta atatgattga cgaggactcg ttccatgcct caagaatcat gagcaacttt
     1321 caggaacaag aacatcatca tcataagatg ggaggaggga gatcaacatc aggattggag
     1381 gagttgataa tggggtgcac tccatcatca tcgactgatc tcaaagaaga atcatccaac
     1441 acgaaccact cagaggcaga ttggttgaag tactccacat tctggcctga tcctgacagt
     1501 caagatcatc attgaaataa gcaacaacaa aaaaacttaa gtaaacaaaa aagagagaga
     1561 caacatcact atcatcatat atgaccacac tagctacttg aaacctagtt acatcttata
     1621 ttctttttca ccaacaaaca gaccccattt cttcactctt tatctttttt actttttctt
     1681 ctttatctct ctacaactct tcacatttgc aggcctttga taaatataca aatcagggct
     1741 caaacagaaa ctaactgtac aacagaactc catgttggta aagaaaaaag aagcatccaa
     1801 aaagaagaaa aaagaattca agaaaaggtt cgtctctact gacaccaaga tagaagagca
     1861 aacccataca aaagaaaaaa gaacaaaaga aaaaaagaag ccttcttttc agcatgaaaa
     1921 tcatcaccac catgattaca ttttatcatc ttttatgtta ctatttttat attattaatt
     1981 ttgtttattt tttgaattta gattttattg tataccccct tcaattgttt tatttatata
     2041 tagggcatag aataggagta caagttgtac ataacttatt gttttttatg tta
//
LOCUS       XM_071886253            2115 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAC domain-containing
            protein 75-like (LOC139904318), transcript variant X2, mRNA.
ACCESSION   XM_071886253
VERSION     XM_071886253.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2115
                     /gene="LOC139904318"
                     /note="NAC domain-containing protein 75-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139904318"
     CDS             128..1537
                     /gene="LOC139904318"
                     /codon_start=1
                     /product="NAC domain-containing protein 75-like isoform
                     X1"
                     /protein_id="XP_071742354.1"
                     /db_xref="GeneID:139904318"
                     /translation="MNRVDQTRMNISSSDLIDAKLEEHQLCGSKHCPGCGHRLEGKPD
                     WVGLPAGVKFDPSDQELIEHLEAKVEAKNFKSHPLIDEFIPTIEGEDGICYTHPEKLP
                     GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVLVNQKQK
                     GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGLHEEEREGELVVSKIFYQTQPRQCNWS
                     ERASNNNVLSNVIAINEGVSNEMNRRDSRSGSGSCSSSKEINITATTASTHNNMDELS
                     AVSVSAVMSSYNPMDQMQHLKGVDHFSFVPFRKSFDEVGTTGGEASTGREIGITCDEQ
                     DLQRQQQQLHMTQQQMPHQHQMSAAGFHVSRPTHSVSTLISPHPHSHPLHHTSINMID
                     EDSFHASRIMSNFQEQEHHHHKMGGGRSTSGLEELIMGCTPSSSTDLKEESSNTNHSE
                     ADWLKYSTFWPDPDSQDHH"
     misc_feature    272..697
                     /gene="LOC139904318"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
ORIGIN      
        1 agctaagaaa aggtgctgct acatgtacat gcgtgtttcc acatctatat atacatatat
       61 gtatatcaga ttttaggtga tatgatacga tgatgaagtt gagttaagtt gattggtgtt
      121 taattaaatg aatagagtgg atcaaacaag aatgaatatt agcagctctg atctgattga
      181 tgcaaagctt gaagaacatc aattatgtgg atccaaacac tgtccaggtt gtggtcatcg
      241 ccttgaagga aaaccggatt gggttggtct accagctgga gtaaagtttg atccatctga
      301 ccaagaatta attgaacatc ttgaagccaa agttgaagcc aagaacttca aatctcatcc
      361 gttgattgac gagttcattc ctacaattga aggtgaagat gggatttgtt atacacatcc
      421 tgaaaagctt ccaggagtta caagagatgg attgagtaga cattttttcc atcggccttc
      481 gaaggcttac acaacgggga caagaaaaag aagaaagatc caaaccgaat gtgatctaca
      541 aggtggggag actcgttggc acaaaactgg caaaactcga ccagttttgg ttaatcaaaa
      601 gcaaaaaggg tgcaagaaaa ttttagtact ctacacaaac tttggtaaga accgaaaacc
      661 agaaaagacc aattgggtaa tgcatcaata ccatcttgga ctgcacgaag aggagcgtga
      721 aggcgagctt gtggtgtcaa aaatatttta tcaaactcaa ccacgacaat gcaattggtc
      781 cgaaagggct agtaacaata atgttttatc gaatgttata gccattaatg aaggggttag
      841 taacgaaatg aatagaagag atagtagaag cggaagtggt agttgttctt cgtctaaaga
      901 aatcaacata actgcaacaa ccgcttctac tcataataat atggacgaac tttcggcagt
      961 tagtgttagt gccgttatgt caagttacaa tccaatggat caaatgcaac atctaaaagg
     1021 tgttgatcat tttagctttg tcccgtttcg aaagagcttc gatgaggtgg gtacaactgg
     1081 aggtgaggca tcaaccggaa gagaaatagg tatcacgtgt gatgagcaag acctacaaag
     1141 gcagcagcaa cagcttcaca tgacgcaaca acagatgcca catcagcacc aaatgtcagc
     1201 cgctggtttc cacgtcagcc ggccaactca ttctgtatca actctcatat cgccacatcc
     1261 acattcacat ccacttcatc atacctctat taatatgatt gacgaggact cgttccatgc
     1321 ctcaagaatc atgagcaact ttcaggaaca agaacatcat catcataaga tgggaggagg
     1381 gagatcaaca tcaggattgg aggagttgat aatggggtgc actccatcat catcgactga
     1441 tctcaaagaa gaatcatcca acacgaacca ctcagaggca gattggttga agtactccac
     1501 attctggcct gatcctgaca gtcaagatca tcattgaaat aagcaacaac aaaaaaactt
     1561 aagtaaacaa aaaagagaga gacaacatca ctatcatcat atatgaccac actagctact
     1621 tgaaacctag ttacatctta tattcttttt caccaacaaa cagaccccat ttcttcactc
     1681 tttatctttt ttactttttc ttctttatct ctctacaact cttcacattt gcaggccttt
     1741 gataaatata caaatcaggg ctcaaacaga aactaactgt acaacagaac tccatgttgg
     1801 taaagaaaaa agaagcatcc aaaaagaaga aaaaagaatt caagaaaagg ttcgtctcta
     1861 ctgacaccaa gatagaagag caaacccata caaaagaaaa aagaacaaaa gaaaaaaaga
     1921 agccttcttt tcagcatgaa aatcatcacc accatgatta cattttatca tcttttatgt
     1981 tactattttt atattattaa ttttgtttat tttttgaatt tagattttat tgtatacccc
     2041 cttcaattgt tttatttata tatagggcat agaataggag tacaagttgt acataactta
     2101 ttgtttttta tgtta
//
LOCUS       XM_071886254            2111 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAC domain-containing
            protein 75-like (LOC139904318), transcript variant X3, mRNA.
ACCESSION   XM_071886254
VERSION     XM_071886254.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2111
                     /gene="LOC139904318"
                     /note="NAC domain-containing protein 75-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139904318"
     CDS             124..1533
                     /gene="LOC139904318"
                     /codon_start=1
                     /product="NAC domain-containing protein 75-like isoform
                     X1"
                     /protein_id="XP_071742355.1"
                     /db_xref="GeneID:139904318"
                     /translation="MNRVDQTRMNISSSDLIDAKLEEHQLCGSKHCPGCGHRLEGKPD
                     WVGLPAGVKFDPSDQELIEHLEAKVEAKNFKSHPLIDEFIPTIEGEDGICYTHPEKLP
                     GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVLVNQKQK
                     GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGLHEEEREGELVVSKIFYQTQPRQCNWS
                     ERASNNNVLSNVIAINEGVSNEMNRRDSRSGSGSCSSSKEINITATTASTHNNMDELS
                     AVSVSAVMSSYNPMDQMQHLKGVDHFSFVPFRKSFDEVGTTGGEASTGREIGITCDEQ
                     DLQRQQQQLHMTQQQMPHQHQMSAAGFHVSRPTHSVSTLISPHPHSHPLHHTSINMID
                     EDSFHASRIMSNFQEQEHHHHKMGGGRSTSGLEELIMGCTPSSSTDLKEESSNTNHSE
                     ADWLKYSTFWPDPDSQDHH"
     misc_feature    268..693
                     /gene="LOC139904318"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
ORIGIN      
        1 ggtcatatga accgcctagc tagttaaata gcttaaatta ggaaagagct aagaaaagat
       61 atcagatttt aggtgatatg atacgatgat gaagttgagt taagttgatt ggtgtttaat
      121 taaatgaata gagtggatca aacaagaatg aatattagca gctctgatct gattgatgca
      181 aagcttgaag aacatcaatt atgtggatcc aaacactgtc caggttgtgg tcatcgcctt
      241 gaaggaaaac cggattgggt tggtctacca gctggagtaa agtttgatcc atctgaccaa
      301 gaattaattg aacatcttga agccaaagtt gaagccaaga acttcaaatc tcatccgttg
      361 attgacgagt tcattcctac aattgaaggt gaagatggga tttgttatac acatcctgaa
      421 aagcttccag gagttacaag agatggattg agtagacatt ttttccatcg gccttcgaag
      481 gcttacacaa cggggacaag aaaaagaaga aagatccaaa ccgaatgtga tctacaaggt
      541 ggggagactc gttggcacaa aactggcaaa actcgaccag ttttggttaa tcaaaagcaa
      601 aaagggtgca agaaaatttt agtactctac acaaactttg gtaagaaccg aaaaccagaa
      661 aagaccaatt gggtaatgca tcaataccat cttggactgc acgaagagga gcgtgaaggc
      721 gagcttgtgg tgtcaaaaat attttatcaa actcaaccac gacaatgcaa ttggtccgaa
      781 agggctagta acaataatgt tttatcgaat gttatagcca ttaatgaagg ggttagtaac
      841 gaaatgaata gaagagatag tagaagcgga agtggtagtt gttcttcgtc taaagaaatc
      901 aacataactg caacaaccgc ttctactcat aataatatgg acgaactttc ggcagttagt
      961 gttagtgccg ttatgtcaag ttacaatcca atggatcaaa tgcaacatct aaaaggtgtt
     1021 gatcatttta gctttgtccc gtttcgaaag agcttcgatg aggtgggtac aactggaggt
     1081 gaggcatcaa ccggaagaga aataggtatc acgtgtgatg agcaagacct acaaaggcag
     1141 cagcaacagc ttcacatgac gcaacaacag atgccacatc agcaccaaat gtcagccgct
     1201 ggtttccacg tcagccggcc aactcattct gtatcaactc tcatatcgcc acatccacat
     1261 tcacatccac ttcatcatac ctctattaat atgattgacg aggactcgtt ccatgcctca
     1321 agaatcatga gcaactttca ggaacaagaa catcatcatc ataagatggg aggagggaga
     1381 tcaacatcag gattggagga gttgataatg gggtgcactc catcatcatc gactgatctc
     1441 aaagaagaat catccaacac gaaccactca gaggcagatt ggttgaagta ctccacattc
     1501 tggcctgatc ctgacagtca agatcatcat tgaaataagc aacaacaaaa aaacttaagt
     1561 aaacaaaaaa gagagagaca acatcactat catcatatat gaccacacta gctacttgaa
     1621 acctagttac atcttatatt ctttttcacc aacaaacaga ccccatttct tcactcttta
     1681 tcttttttac tttttcttct ttatctctct acaactcttc acatttgcag gcctttgata
     1741 aatatacaaa tcagggctca aacagaaact aactgtacaa cagaactcca tgttggtaaa
     1801 gaaaaaagaa gcatccaaaa agaagaaaaa agaattcaag aaaaggttcg tctctactga
     1861 caccaagata gaagagcaaa cccatacaaa agaaaaaaga acaaaagaaa aaaagaagcc
     1921 ttcttttcag catgaaaatc atcaccacca tgattacatt ttatcatctt ttatgttact
     1981 atttttatat tattaatttt gtttattttt tgaatttaga ttttattgta tacccccttc
     2041 aattgtttta tttatatata gggcatagaa taggagtaca agttgtacat aacttattgt
     2101 tttttatgtt a
//
LOCUS       XM_071886255            1880 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAC domain-containing
            protein 75-like (LOC139904318), transcript variant X4, mRNA.
ACCESSION   XM_071886255
VERSION     XM_071886255.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1880
                     /gene="LOC139904318"
                     /note="NAC domain-containing protein 75-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139904318"
     CDS             177..1541
                     /gene="LOC139904318"
                     /codon_start=1
                     /product="NAC domain-containing protein 75-like isoform
                     X2"
                     /protein_id="XP_071742356.1"
                     /db_xref="GeneID:139904318"
                     /translation="MNRVDQTRMNISSSDLIDAKLEEHQLCGSKHCPGCGHRLEGKPD
                     WVGLPAGVKFDPSDQELIEHLEAKVEAKNFKSHPLIDEFIPTIEGEDGICYTHPEKLP
                     GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVLVNQKQK
                     GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGLHEEEREGELVVSKIFYQTQPRQCNWS
                     ERASNNNVLSNVIAINEGVSNEMNRRDSRSGSGSCSSSKEINITATTASTHNNMDELS
                     AVSVSAVMSSYNPMDQMQHLKGVDHFSFVPFRKSFDEVGTTGGEASTGREIGITCDEQ
                     DLQRQQQQLHMTQQQMPHQHQMSAAGFHVSRPTHSVSTLISPHPHSHPLHHTSINMID
                     EDSFHASRIMSNFQEQEHHHHKMGGGRSTSGLEELIMGCTPSSSTDLKEAFDKYTNQG
                     SNRN"
     misc_feature    321..746
                     /gene="LOC139904318"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
ORIGIN      
        1 tttagcttaa tttcttctta ctcatcataa aaaaaatact aaatttcatt tgaaaagata
       61 atttttgatt gattgatcgg tttagtattt ttcttttgat tcttatttca gatatcagat
      121 tttaggtgat atgatacgat gatgaagttg agttaagttg attggtgttt aattaaatga
      181 atagagtgga tcaaacaaga atgaatatta gcagctctga tctgattgat gcaaagcttg
      241 aagaacatca attatgtgga tccaaacact gtccaggttg tggtcatcgc cttgaaggaa
      301 aaccggattg ggttggtcta ccagctggag taaagtttga tccatctgac caagaattaa
      361 ttgaacatct tgaagccaaa gttgaagcca agaacttcaa atctcatccg ttgattgacg
      421 agttcattcc tacaattgaa ggtgaagatg ggatttgtta tacacatcct gaaaagcttc
      481 caggagttac aagagatgga ttgagtagac attttttcca tcggccttcg aaggcttaca
      541 caacggggac aagaaaaaga agaaagatcc aaaccgaatg tgatctacaa ggtggggaga
      601 ctcgttggca caaaactggc aaaactcgac cagttttggt taatcaaaag caaaaagggt
      661 gcaagaaaat tttagtactc tacacaaact ttggtaagaa ccgaaaacca gaaaagacca
      721 attgggtaat gcatcaatac catcttggac tgcacgaaga ggagcgtgaa ggcgagcttg
      781 tggtgtcaaa aatattttat caaactcaac cacgacaatg caattggtcc gaaagggcta
      841 gtaacaataa tgttttatcg aatgttatag ccattaatga aggggttagt aacgaaatga
      901 atagaagaga tagtagaagc ggaagtggta gttgttcttc gtctaaagaa atcaacataa
      961 ctgcaacaac cgcttctact cataataata tggacgaact ttcggcagtt agtgttagtg
     1021 ccgttatgtc aagttacaat ccaatggatc aaatgcaaca tctaaaaggt gttgatcatt
     1081 ttagctttgt cccgtttcga aagagcttcg atgaggtggg tacaactgga ggtgaggcat
     1141 caaccggaag agaaataggt atcacgtgtg atgagcaaga cctacaaagg cagcagcaac
     1201 agcttcacat gacgcaacaa cagatgccac atcagcacca aatgtcagcc gctggtttcc
     1261 acgtcagccg gccaactcat tctgtatcaa ctctcatatc gccacatcca cattcacatc
     1321 cacttcatca tacctctatt aatatgattg acgaggactc gttccatgcc tcaagaatca
     1381 tgagcaactt tcaggaacaa gaacatcatc atcataagat gggaggaggg agatcaacat
     1441 caggattgga ggagttgata atggggtgca ctccatcatc atcgactgat ctcaaagaag
     1501 cctttgataa atatacaaat cagggctcaa acagaaacta actgtacaac agaactccat
     1561 gttggtaaag aaaaaagaag catccaaaaa gaagaaaaaa gaattcaaga aaaggttcgt
     1621 ctctactgac accaagatag aagagcaaac ccatacaaaa gaaaaaagaa caaaagaaaa
     1681 aaagaagcct tcttttcagc atgaaaatca tcaccaccat gattacattt tatcatcttt
     1741 tatgttacta tttttatatt attaattttg tttatttttt gaatttagat tttattgtat
     1801 acccccttca attgttttat ttatatatag ggcatagaat aggagtacaa gttgtacata
     1861 acttattgtt ttttatgtta
//
LOCUS       XM_071886256            1883 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitochondrial-processing
            peptidase subunit alpha-like (LOC139904319), mRNA.
ACCESSION   XM_071886256
VERSION     XM_071886256.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1883
                     /gene="LOC139904319"
                     /note="mitochondrial-processing peptidase subunit
                     alpha-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139904319"
     CDS             141..1652
                     /gene="LOC139904319"
                     /codon_start=1
                     /product="mitochondrial-processing peptidase subunit
                     alpha-like"
                     /protein_id="XP_071742357.1"
                     /db_xref="GeneID:139904319"
                     /translation="MYRAASSRFRTLKGHAGNKTLTRFSSSSAVAAKSSSKGLFSWFT
                     GGSASSSPPLDFPLIGYELPPSLPDHVEQGTTKITTLSNGVKIASESSSNPAASIGLY
                     INSGSIYETPATFGATHILERMAFKSTTNRSHLRLVREVEAIGGNVTSSASREQMGYT
                     FDALKTYVPQMVELLVDSLRNQAFLDWEIKEQIEKVKAEIGEYANNPEALLLESIHSA
                     GYAGPLGNPLLASEGLLNRINSTVLEEFVSANYTAPRMVLAASGVEHEELLKYAEPLL
                     SDLPGGAHVEEPKSVYVGGDHRVMADTGKTSFALAFELPGGWLKLKEAMTLTVLQMLM
                     GGGGSFSAGGPGKGMYSRLYLRVLNEYPEIQSFSAFNSIYNHTAIFGIQATTSSGFAS
                     KAIDIAAKELIAVATNGEVTQKQLDRAKQSTKSAILMNLESRMVASEDIGRQVLTYGE
                     RKPVEHFLKAIDEVSANDITSIAKKLLSSPLTMASHGDVINVPTYDSVNRKFS"
     misc_feature    330..1574
                     /gene="LOC139904319"
                     /note="Predicted Zn-dependent peptidase, M16 family
                     [General function prediction only]; Region: PqqL; COG0612"
                     /db_xref="CDD:440377"
     polyA_site      1883
                     /gene="LOC139904319"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttcacctct cgaaaccccc aaaattcgtc gcgcaatcac ctcctaattt gcttccgcag
       61 caatcagaag tgaaacaatc gattgaaacc aatctgtgtt tctcgatttt actttactta
      121 ttttatttaa tatatttgtc atgtatcgcg ctgcatcttc tagattcaga accctaaagg
      181 gtcatgcagg taacaagaca cttaccaggt tttcaagttc aagtgccgta gctgccaagt
      241 catcatcaaa gggactcttc agttggttta ccggaggaag tgcatcaagc tctcctcctt
      301 tggactttcc ccttattggt tatgaattac caccttcttt acctgatcat gttgaacaag
      361 gaacaacaaa gataacaact ctttcaaatg gagttaaaat tgcttcagaa agttcatcta
      421 accctgcagc ttctattggg ttgtatataa atagtggctc gatctacgaa acaccggcca
      481 catttggggc tacacacatt ctagaacgta tggcctttaa aagcacaacc aatcgaagcc
      541 acttgcggct tgtgcgggaa gtggaggcaa ttggtggcaa tgtgacgtct tctgcttcta
      601 gggagcaaat gggatacact tttgatgccc taaagacgta tgttcctcaa atggtagagc
      661 tacttgttga ctctctaaga aatcaagctt tcttggattg ggaaattaaa gaacagattg
      721 agaaagtgaa ggctgagatt ggtgaatatg ccaacaatcc tgaggctttg ctgttagaat
      781 caattcattc agctggatat gctggtccgc ttgggaatcc tcttcttgcc tctgaaggct
      841 tactcaacag aattaacagc actgttctgg aggagtttgt ttctgcaaac tatactgctc
      901 ctcgaatggt ccttgctgca tcaggagttg agcacgagga actattgaaa tatgcagagc
      961 ctcttctctc tgatttgcca ggtggcgctc acgttgagga acctaaatca gtgtatgttg
     1021 gtggtgatca tcgtgttatg gctgatacag ggaaaactag ttttgctctt gcgttcgaac
     1081 ttcctggtgg ctggcttaaa ttgaaggaag ccatgacctt gacagttctt cagatgctaa
     1141 tgggaggtgg tggatctttt tcagctggtg gtcctggaaa agggatgtac tcacgacttt
     1201 atcttagagt cttgaatgaa tatcccgaga ttcagtcgtt ttcggcgttc aactcaatct
     1261 acaatcacac tgctatattt ggaatccaag ctaccacaag ttctggtttt gcttcaaaag
     1321 ctattgatat agcagcgaaa gaactcattg cagttgccac taatggagaa gtaactcaga
     1381 aacagctgga ccgtgccaag cagtcgacca agtctgctat tttgatgaac cttgagtcaa
     1441 ggatggttgc ttcagaagat ataggcagac aagtactgac atacggagaa aggaaacctg
     1501 tcgagcattt tcttaaagct atcgatgaag tatcagccaa tgacatcact tccatagcca
     1561 aaaagcttct ttcttcccct ctcaccatgg cttctcatgg agatgttata aacgtaccga
     1621 catacgactc cgtcaaccgc aaattcagtt agtggtgaga ctacatgaaa gtgccaaatt
     1681 gggtactctt tttatttctt catcttgtga atcttttgag gtagtgcagt tgataaccat
     1741 ggataataag gacatgctta tgccctttgc ctgtaaaacg aataatttaa gccaatccct
     1801 cgacaaccat aagtttttaa ggcttgatat gtattatctg taattttgat aaaattttga
     1861 tttggctctg ccaatggact tga
//
LOCUS       XR_011778731             542 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904320), transcript variant X1, ncRNA.
ACCESSION   XR_011778731
VERSION     XR_011778731.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..542
                     /gene="LOC139904320"
                     /note="uncharacterized LOC139904320; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904320"
     ncRNA           1..542
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904320"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904320"
ORIGIN      
        1 cttggagaga atcaaatctg cttttgatga taagttccga ctcacgtgac catgttctgt
       61 tatatgtgac tttttgcagg cacatcatga tgtgattgtg gtaaatcaat tcgatgctgc
      121 agaatttact tgctggagtc caaatgcagt atgttaaact gccatgtttg cttcaaaagg
      181 tatctttgat ctgctgctca taaagttgtt gatatgcttg gatttaatat ttcaccccta
      241 gtggtgaaag tactctgagc tatgctaaag attgctgata accgaggata cgcattggtt
      301 ccggtgacaa aatttctggc ctgcactgac ggttccattg tctacctggc taaatgtcag
      361 gtaactttta caatatattt tctatgaatc atttacgagt aaattgattt gatttgaaga
      421 ttatattatt ctactatatt ctagtttaca agtcaatact gtaggttaaa tgttttaatt
      481 atttacacag acgtcttcca agattttgat tttctttctt ttatataaga aggttggtta
      541 tt
//
LOCUS       XR_011778732             524 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904320), transcript variant X2, ncRNA.
ACCESSION   XR_011778732
VERSION     XR_011778732.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..524
                     /gene="LOC139904320"
                     /note="uncharacterized LOC139904320; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904320"
     ncRNA           1..524
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904320"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904320"
ORIGIN      
        1 ctctttaaac tgctcttact gctgctgatg agaagctcat ctttatgcaa catcttggag
       61 agaatcaaat ctgcttttga tgataagttc cgactcacgt gaccatgttc tgttatatgt
      121 gactttttgc agatgttaaa ctgccatgtt tgcttcaaaa ggtatctttg atctgctgct
      181 cataaagttg ttgatatgct tggatttaat atttcacccc tagtggtgaa agtactctga
      241 gctatgctaa agattgctga taaccgagga tacgcattgg ttccggtgac aaaatttctg
      301 gcctgcactg acggttccat tgtctacctg gctaaatgtc aggtaacttt tacaatatat
      361 tttctatgaa tcatttacga gtaaattgat ttgatttgaa gattatatta ttctactata
      421 ttctagttta caagtcaata ctgtaggtta aatgttttaa ttatttacac agacgtcttc
      481 caagattttg attttctttc ttttatataa gaaggttggt tatt
//
LOCUS       XR_011778733            1428 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904321), transcript variant X1, ncRNA.
ACCESSION   XR_011778733
VERSION     XR_011778733.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1428
                     /gene="LOC139904321"
                     /note="uncharacterized LOC139904321; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904321"
     ncRNA           1..1428
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904321"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904321"
ORIGIN      
        1 cgactgtatt atgaattgat tcactatata tttgaagatg gagaatctga aagctcttaa
       61 cttcatgttt attctatgtg aaagtaccaa agctagaata accctagagt catcaactcg
      121 agagggggac aggtggcggc atcttaagtg catctggagg caatgggttc gctagaggtt
      181 ctgttggtgc agagtggcct tttgttttgt atactgatca agagcttctc cctgcaaagc
      241 agaatacgaa ccaagaatct actaaggtta aagtttaagc catggtaaat gtaagagttt
      301 tttaatgctc accaaatcat taatttattt tctatttttt ctgactattc ttgatgtttt
      361 ggttaattta tattatctct tttcgcatta tgattattct tcaaaattat atatgatgca
      421 ttcgggatgg atgcgtatag cataaacaga agcttggata tttaccatgt ttgaaggtca
      481 ttaaggaacc agtggtcaag aagttaaaac tcaagacatt ttcacaaagt caataacttg
      541 aatatataat tatggagaat ctgaagctgt tagctttatg tatatccgaa ctcctggtat
      601 aatgatgcta aaagtaccga agctagattt atcaagtcga ggtatgcttt acatttacct
      661 gttatgcatc aaggcatttt cttttaacct cttaaatttt taccgttcat cgaacatatg
      721 gcattatggg tgaaaaagtg gtttacccaa accatacttt acacccaata cgaggtgtat
      781 gctttacatt cattgatgat ttattgccaa atgtgtgcag tctcgttaac tgttctatag
      841 tcaagtacgg gtacttcacg aatggtaacg cgtagataca tgtctacttt attaatacat
      901 aataatcatc ctaatatttg ttgtggagga agaacaccag agatcccgat cataaacagt
      961 aatatatatc taatggtgac agtaaattat atgtaatggt ggaggcatct caagtgcatc
     1021 tggaggcacc tgtttttgca tgccaaatca gccccgctgg aaaagtgttg atatccaaga
     1081 gtatgctaga gctgttcttc ccatgcgttg gaatcgtgtg caggttgtca acatggtttt
     1141 tgttgtggtt gaaccgggct ctatgtcatg cggtccatta gagaacacaa ctaataatca
     1201 ctcggcaaat tgtgaacttg aggtctgccc catggaacta atatatctgc ttgaagattg
     1261 caatgtgaac tcttcattgt ctttcactct tcatttgata acccagttag gtcgcgtaca
     1321 tatagtaaaa atactcacac ccccttccta ggtaaaacct catccgttta cctatttata
     1381 tatatatatc gacttgccag tgatttgaaa ctttataaca ttgaggaa
//
LOCUS       XR_011778734            1278 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904321), transcript variant X2, ncRNA.
ACCESSION   XR_011778734
VERSION     XR_011778734.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1278
                     /gene="LOC139904321"
                     /note="uncharacterized LOC139904321; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904321"
     ncRNA           1..1278
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904321"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904321"
ORIGIN      
        1 cgactgtatt atgaattgat tcactatata tttgaagatg gagaatctga aagctcttaa
       61 cttcatgttt attctatgtg aaagtaccaa agctagaata accctagagt catcaactcg
      121 agagggggac aggtggcggc atcttaagtg catctggagg caatgggttc gctagaggtt
      181 ctgttggtgc agagtggcct tttgttttgt atactgatca agagcttctc cctgcaaagc
      241 agaatacgaa ccaagaatct actaaggtta aagtttaagc catggtaaat cataaacaga
      301 agcttggata tttaccatgt ttgaaggtca ttaaggaacc agtggtcaag aagttaaaac
      361 tcaagacatt ttcacaaagt caataacttg aatatataat tatggagaat ctgaagctgt
      421 tagctttatg tatatccgaa ctcctggtat aatgatgcta aaagtaccga agctagattt
      481 atcaagtcga ggtatgcttt acatttacct gttatgcatc aaggcatttt cttttaacct
      541 cttaaatttt taccgttcat cgaacatatg gcattatggg tgaaaaagtg gtttacccaa
      601 accatacttt acacccaata cgaggtgtat gctttacatt cattgatgat ttattgccaa
      661 atgtgtgcag tctcgttaac tgttctatag tcaagtacgg gtacttcacg aatggtaacg
      721 cgtagataca tgtctacttt attaatacat aataatcatc ctaatatttg ttgtggagga
      781 agaacaccag agatcccgat cataaacagt aatatatatc taatggtgac agtaaattat
      841 atgtaatggt ggaggcatct caagtgcatc tggaggcacc tgtttttgca tgccaaatca
      901 gccccgctgg aaaagtgttg atatccaaga gtatgctaga gctgttcttc ccatgcgttg
      961 gaatcgtgtg caggttgtca acatggtttt tgttgtggtt gaaccgggct ctatgtcatg
     1021 cggtccatta gagaacacaa ctaataatca ctcggcaaat tgtgaacttg aggtctgccc
     1081 catggaacta atatatctgc ttgaagattg caatgtgaac tcttcattgt ctttcactct
     1141 tcatttgata acccagttag gtcgcgtaca tatagtaaaa atactcacac ccccttccta
     1201 ggtaaaacct catccgttta cctatttata tatatatatc gacttgccag tgatttgaaa
     1261 ctttataaca ttgaggaa
//
LOCUS       XR_011778735            1249 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904321), transcript variant X3, ncRNA.
ACCESSION   XR_011778735
VERSION     XR_011778735.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1249
                     /gene="LOC139904321"
                     /note="uncharacterized LOC139904321; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904321"
     ncRNA           1..1249
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904321"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904321"
ORIGIN      
        1 cgactgtatt atgaattgat tcactatata tttgaagatg gagaatctga aagctcttaa
       61 cttcatgttt attctatgtg aaagtaccaa agctagaata accctagagt catcaactcg
      121 agagggggac aggtggcggc atcttaagtg catctggagg caatgggttc gctagaggtt
      181 ctgttggtgc agagtggcct tttgttttgt atactgatca agagcttctc cctgcaaagc
      241 agaatacgaa ccaagaatct actaaggtta aagtttaagc catggtaaat gtaagagttt
      301 tttaatgctc accaaatcat taatttattt tctatttttt ctgactattc ttgatgtttt
      361 ggttaattta tattatctct tttcgcatta tgattattct tcaaaattat atatgatgca
      421 ttcgggatgg atgcgtatag cataaacaga agcttggata tttaccatgt ttgaaggtca
      481 ttaaggaacc agtggtcaag aagttaaaac tcaagacatt ttcacaaagt caataacttg
      541 aatatataat tatggagaat ctgaagctgt tagctttatg tatatccgaa ctcctggtat
      601 aatgatgcta aaagtaccga agctagattt atcaagtcga gtctcgttaa ctgttctata
      661 gtcaagtacg ggtacttcac gaatggtaac gcgtagatac atgtctactt tattaataca
      721 taataatcat cctaatattt gttgtggagg aagaacacca gagatcccga tcataaacag
      781 taatatatat ctaatggtga cagtaaatta tatgtaatgg tggaggcatc tcaagtgcat
      841 ctggaggcac ctgtttttgc atgccaaatc agccccgctg gaaaagtgtt gatatccaag
      901 agtatgctag agctgttctt cccatgcgtt ggaatcgtgt gcaggttgtc aacatggttt
      961 ttgttgtggt tgaaccgggc tctatgtcat gcggtccatt agagaacaca actaataatc
     1021 actcggcaaa ttgtgaactt gaggtctgcc ccatggaact aatatatctg cttgaagatt
     1081 gcaatgtgaa ctcttcattg tctttcactc ttcatttgat aacccagtta ggtcgcgtac
     1141 atatagtaaa aatactcaca cccccttcct aggtaaaacc tcatccgttt acctatttat
     1201 atatatatat cgacttgcca gtgatttgaa actttataac attgaggaa
//
LOCUS       XR_011778736            1404 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904321), transcript variant X4, ncRNA.
ACCESSION   XR_011778736
VERSION     XR_011778736.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1404
                     /gene="LOC139904321"
                     /note="uncharacterized LOC139904321; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904321"
     ncRNA           1..1404
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904321"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904321"
ORIGIN      
        1 cgactgtatt atgaattgat tcactatata tttgaagatg gagaatctga aagctcttaa
       61 cttcatgttt attctatgtg aaagtaccaa agctagaata accctagagt catcaactcg
      121 agagggggac aggtggcggc atcttaagtg catctggagg caatgggttc gctagaggtt
      181 ctgttggtgc agagtggcct tttgttttgt atactgatca agagcttctc cctgcaaagc
      241 agaatacgaa ccaagaatct actaaggtta aagtttaagc catggtaaat gtaagagttt
      301 tttaatgctc accaaatcat taatttattt tctatttttt ctgactattc ttgatgtttt
      361 ggttaattta tattatctct tttcgcatta tgattattct tcaaaattat atatgatgca
      421 ttcgggatgg atgcgtatag cataaacaga agcttggata tttaccatgt ttgaaggtca
      481 ttaaggaacc agtggtcaag aagttaaaac tcaagacatt ttcacaaagt caataacttg
      541 aatatataat tatggagaat ctgaagctgt tagctttatg tatatccgaa ctcctggtat
      601 aatgatgcta aaagtaccga agctagattt atcaagtcga ggtatgcttt acatttacct
      661 gttatgcatc aaggcatttt cttttaacct cttaaatttt taccgttcat cgaacatatg
      721 gcattatggg tgaaaaagtg gtttacccaa accatacttt acacccaata cgaggtgtat
      781 gctttacatt cattgatgat ttattgccaa atgtgtgcag tctcgttaac tgttctatag
      841 tcaagtacgg gtacttcacg aatggtaacg cgtagataca tgtctacttt attaatacat
      901 aataatcatc ctaatatttg ttgtggagga agaacaccag agatcccgat cataaacagt
      961 aatatatatc taatggtgac agtaaattat atgtaatggt ggaggcatct caagtgcatc
     1021 tggaggcacc tgtttttgca tgccaaatca gccccgctgg aaaagtgttg atatccaaga
     1081 gtatgctaga gctgttcttc ccatgcgttg gaatcgtgtg caggttgaac cgggctctat
     1141 gtcatgcggt ccattagaga acacaactaa taatcactcg gcaaattgtg aacttgaggt
     1201 ctgccccatg gaactaatat atctgcttga agattgcaat gtgaactctt cattgtcttt
     1261 cactcttcat ttgataaccc agttaggtcg cgtacatata gtaaaaatac tcacaccccc
     1321 ttcctaggta aaacctcatc cgtttaccta tttatatata tatatcgact tgccagtgat
     1381 ttgaaacttt ataacattga ggaa
//
LOCUS       XM_071886257             994 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides meiotic nuclear division
            protein 1 homolog (LOC139904322), mRNA.
ACCESSION   XM_071886257
VERSION     XM_071886257.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..994
                     /gene="LOC139904322"
                     /note="meiotic nuclear division protein 1 homolog; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139904322"
     CDS             102..716
                     /gene="LOC139904322"
                     /codon_start=1
                     /product="meiotic nuclear division protein 1 homolog"
                     /protein_id="XP_071742358.1"
                     /db_xref="GeneID:139904322"
                     /translation="MLQIFYDSQDFYLLKELEKLGPRKGVISQSVKDVVQSLVDDDLV
                     SKDKIGTSIYFWSLPSCAGNQLRNVTKKLESELQSSKNRHVELVEQCESLKKGREDSD
                     AREEALSELKDIEQKYNNLKKEMGQYADNDPAAFDAMKEAIKVAHEAANRWTDNIFTL
                     RQWCSNNFPQAKEQLEHLYNEVGITEDFDYIELPAMPPVKQAEE"
     misc_feature    102..683
                     /gene="LOC139904322"
                     /note="Protein predicted to be involved in meiotic
                     recombination [Cell division and chromosome partitioning /
                     General function prediction only]; Region: COG5124"
                     /db_xref="CDD:227453"
ORIGIN      
        1 gtttgtttaa ggagtatatt tattattttt gtatttgttt tgttttcatg ctggtgtagt
       61 ccaagaaaag aggtttgtcg ttggaagata agcgagagaa gatgcttcaa atcttctacg
      121 actctcaaga cttttacctt ctcaaggaac ttgaaaagtt gggtcctagg aaaggtgtca
      181 tcagccaatc tgtcaaagac gttgtccaaa gtctggtgga tgatgactta gtctcaaaag
      241 acaagattgg aacatcgata tacttttgga gccttcctag ctgtgctgga aatcagctca
      301 gaaatgtaac aaagaaactt gagtcagagc ttcaaagcag caagaaccgg catgtggagc
      361 ttgttgagca atgtgagtcc ctaaagaaag gccgagagga ttcagatgca agagaagagg
      421 ctttgagtga gctaaaagac attgaacaaa agtataataa tctgaaaaaa gaaatgggac
      481 aatatgcaga caatgatcca gctgcatttg atgcaatgaa ggaagctatt aaagttgccc
      541 atgaagcagc aaacagatgg acagacaata ttttcacatt gcgacagtgg tgttcaaaca
      601 atttccctca ggccaaagaa cagcttgaac acttgtacaa tgaggtgggg ataacagaag
      661 atttcgacta tatagagcta cccgcaatgc cacctgtgaa gcaagctgag gaatagatac
      721 tagaagccgc atgcaaacta attccataca tacatgccta cactagaatc cagattattg
      781 aatcaaggtt atactttgat gttcagtttc acatgtgtct atcctattat gagactctaa
      841 gtcaatttta ccatcaatga accagtgcta cttttcttaa ggtgtgtttt tttttacgcc
      901 ctgtatgtta tatgttagtc attgtctccc acaaagaatg caatattttt ttgcctaata
      961 actgaactta taaggggcac tttgtatccg aagt
//
LOCUS       XM_071886258             423 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein eS30z/eS30y/eS30x-like (LOC139904323), mRNA.
ACCESSION   XM_071886258
VERSION     XM_071886258.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..423
                     /gene="LOC139904323"
                     /note="small ribosomal subunit protein
                     eS30z/eS30y/eS30x-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139904323"
     CDS             106..294
                     /gene="LOC139904323"
                     /codon_start=1
                     /product="small ribosomal subunit protein
                     eS30z/eS30y/eS30x-like"
                     /protein_id="XP_071742359.1"
                     /db_xref="GeneID:139904323"
                     /translation="MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRF
                     VTAVVGFGKKRGPNSSEK"
     misc_feature    112..282
                     /gene="LOC139904323"
                     /note="Ribosomal protein S30; Region: Ribosomal_S30;
                     pfam04758"
                     /db_xref="CDD:398432"
     polyA_site      423
                     /gene="LOC139904323"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatatatttc taaaacccta gccgtaaaac actatcgtct ctgctcagat ttgcaataca
       61 tccaaaggga aaaggcagta acaatcacaa cacatcaaat tcaatatggg taaggttcac
      121 ggttcattgg ctcgtgctgg taaggtgaga ggtcaaaccc caaaggttgc taagcaagat
      181 aagaagaagc agccacgtgg acgtgctcac aaacgtattc agtacaaccg tcgattcgtt
      241 actgctgttg ttggttttgg aaagaagagg ggaccaaact catcggagaa gtaatttgga
      301 gagaatgtgt agtagcttta ttatataagc ttatttgtct aatggaattg gtttcacatt
      361 atgataatgt aactttatga attagatttg aagcttgggt aatagtaatt tattttttga
      421 ata
//
LOCUS       XM_071886259             905 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides B3 domain-containing protein
            At3g19184-like (LOC139904324), mRNA.
ACCESSION   XM_071886259
VERSION     XM_071886259.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..905
                     /gene="LOC139904324"
                     /note="B3 domain-containing protein At3g19184-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139904324"
     CDS             1..702
                     /gene="LOC139904324"
                     /codon_start=1
                     /product="B3 domain-containing protein At3g19184-like"
                     /protein_id="XP_071742360.1"
                     /db_xref="GeneID:139904324"
                     /translation="MVVSKKSYEDLRRQRLEENKKRMEQLNIPQLTQALKTARSPMKR
                     TKPRAIGTEIVVVRRSSRVASLPAPVYKEHGLKTFEILELPRCGRKYRYLRKELGNRV
                     YASDEAREYAINKAEELASKLEGGHMSFSKPLFQSHVTGWLKLPGHLCRKYLPMNDET
                     ITLIDEDGQRSRTLYSARNKGLTAGWRGFCISHELIDGDALVFHLIKHTVFEVYIIRN
                     KDYYADCEINDGSDA"
     misc_feature    385..651
                     /gene="LOC139904324"
                     /note="Plant-specific B3-DNA binding domain; Region:
                     B3_DNA; cd10017"
                     /db_xref="CDD:197383"
     misc_feature    order(394..396,403..405,421..423,430..432,436..438,
                     520..522,547..552,556..561)
                     /gene="LOC139904324"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:197383"
ORIGIN      
        1 atggtggtat caaagaaaag ctatgaggat ttacgtagac aaaggttgga agaaaacaaa
       61 aagaggatgg aacaacttaa cattcctcag ctcactcaag ctctcaaaac cgctcgctct
      121 ccgatgaaac gaacaaaacc tcgtgcaatc gggacagaaa ttgtggtggt taggaggtcc
      181 agtcgtgttg caagtttgcc tgcacctgtt tataaggaac atgggcttaa aacttttgag
      241 atacttgagt taccaaggtg cggaagaaag tataggtatt tacgaaagga gttgggaaac
      301 cgagtttatg cgtctgatga agctagagaa tacgctataa acaaagctga agaacttgca
      361 tctaagcttg aaggtggcca tatgtcattt tccaaacccc tgtttcagtc acacgtgact
      421 ggttggctga aactaccagg tcatttatgc agaaaatatc taccgatgaa tgatgaaacc
      481 atcactttaa ttgatgaaga tggtcaacgg tctcgcacac tttattctgc tcgtaataaa
      541 gggcttactg ctggatggag ggggttttgc attagtcatg aattaattga tggagatgca
      601 ctcgtctttc atttgatcaa acacactgtc tttgaggtat atattataag gaacaaagat
      661 tattatgcag attgtgaaat caatgatggc tctgacgctt gagtttgtcc accaattaaa
      721 caaagtagtt gtaggatatc ggtacgaatt gacaggatga actacaacac aattttggcg
      781 atgtttgata ttgcgctgtt tggcttctcc tatttaaagt gcaagcctgt aagatgaact
      841 acgtttattt aaggatatat aactatgacc tttttccgac tatgacctat gaactctaca
      901 tttat
//
LOCUS       XM_071886260            1051 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone acetyltransferase
            type B catalytic subunit-like (LOC139904325), mRNA.
ACCESSION   XM_071886260
VERSION     XM_071886260.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1051
                     /gene="LOC139904325"
                     /note="histone acetyltransferase type B catalytic
                     subunit-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon."
                     /db_xref="GeneID:139904325"
     CDS             72..365
                     /gene="LOC139904325"
                     /codon_start=1
                     /product="histone acetyltransferase type B catalytic
                     subunit-like"
                     /protein_id="XP_071742361.1"
                     /db_xref="GeneID:139904325"
                     /translation="MKVFNRMTALKSISVVRVEGTSMGLLYCRLVPLVLLLVDGSNPI
                     DVTDPDWEIYLLVKKKTDLQDSPVKLLGFAALYRFFHYPNSRRLRLGQILVFP"
ORIGIN      
        1 gaagcatcaa tcatctgata ccaccgtttc cgatcctaaa aggcgacgaa aggtcggaat
       61 caacaatatt tatgaaggtg ttcaaccgaa tgactgcatt aaaatctatt tcagttgttc
      121 gtgttgaggg cacatctatg ggtctactgt actgtagatt ggtaccactc gttcttcttc
      181 ttgttgatgg tagcaatccc attgatgtca ctgatcctga ctgggagatc tatcttttag
      241 ttaagaagaa aaccgatctg caggatagtc cagtaaaact gcttggtttt gcagctcttt
      301 atcggttctt tcattaccct aacagtcgta ggttgagact tggtcagata ttggtatttc
      361 cttaatacca acgcaagggt tatggaggct atcttcttca agtactcaca aatatggtag
      421 tttcagataa cgtgtatgac ctctctattg aagagccact agactcattg caacatgtaa
      481 gggcttgtat cgacatactc cgtctacttg cattagactc gattcagcct tcactaaact
      541 cagtcgtcgg tcgtctaaag gaggaaaact tggctaaaag aaccaccgtc acccgatttg
      601 gcccaccatc ggacaccatt gaagaagtga gaaaaactct taaaatcaac aaaaagcagt
      661 ttcgacaatg ctgggagatt ctaatctaca tagctcttga ccccgctgat aaataccttg
      721 agaatttcaa gaccattgtg ttggaccgta tcagggctga tgtcatcgat aaagatacat
      781 gtacaagtgg gaaacgaggg actgagtatg atcctgaaat gtcgtttgtg atgttaaaga
      841 cgactggaga tggtgatgaa tcaaaggagg ttgaaataag tgaggatgat aagatcaaac
      901 aagagaagca gctacataaa cttgttgatg aaaggattga agctataaag ttggttgcac
      961 aaaaagtatt actgtatctg ttaagagctc ttgaaaatta tgaatgctgg ttgtggtatt
     1021 acagtgacaa ttttcacaat attttatgtt t
//
LOCUS       XM_071886261             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904326), mRNA.
ACCESSION   XM_071886261
VERSION     XM_071886261.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139904326"
                     /note="uncharacterized LOC139904326; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904326"
     CDS             120..488
                     /gene="LOC139904326"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742362.1"
                     /db_xref="GeneID:139904326"
                     /translation="MASKLKQLQSKVTQASQFLSAHGSAYYKQLMEQNKQYVQQPATV
                     EKCNELSKQLFYTRLASLPNRNESFWKELDYVKNIWKNKKDMHVEQAGIAALFGLECF
                     AWFCAGEIVGRGFTFTGYYV"
     misc_feature    159..479
                     /gene="LOC139904326"
                     /note="Mitochondrial ATP synthase g subunit; Region:
                     ATP-synt_G; pfam04718"
                     /db_xref="CDD:461408"
     polyA_site      720
                     /gene="LOC139904326"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaagaacaac aaaaagtcca aaactttgtc tctggtaaaa cgctcacagc ttcactgccg
       61 agagaagcca aggtcctcag atctctcacc tctgcttcaa tttcattttc agatagagga
      121 tggcatcaaa attgaagcaa ttgcaatcaa aggtaactca ggcatctcaa tttttgtctg
      181 cacatggatc tgcttactat aagcagttaa tggagcagaa caagcagtat gttcaacaac
      241 cagcaactgt tgagaaatgc aatgagttgt ctaaacaatt gttctacact cgtcttgcta
      301 gccttcctaa ccgcaacgag tcattctgga aggagctcga ttacgtgaag aacatatgga
      361 aaaacaaaaa agatatgcac gttgaacaag ctggtattgc tgcattgttt gggctggaat
      421 gctttgcatg gttttgtgct ggtgagattg tagggagagg tttcacattc actggttact
      481 atgtctgagt tttcagccat tatttatgat cgaaggaaac aaaacataaa agaaaaacct
      541 atttaaggaa cttgtaaggc ttttcaatgt catgagtatg accagcatga tttcgttcat
      601 taaacttgtg taaagatact acactctttc ttggaaattt tggagctgag agacatcagt
      661 tgtaatttgg tttcactaat aatctgcata ttagggtaac cactttgtta gtttgatcaa
//
LOCUS       XR_011778737             603 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904327), ncRNA.
ACCESSION   XR_011778737
VERSION     XR_011778737.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139904327"
                     /note="uncharacterized LOC139904327; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904327"
     ncRNA           1..603
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904327"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904327"
ORIGIN      
        1 gtttttacat tatgcaattg taatcctaca gttagaaaag tttgcaactt ggagcttttt
       61 tcgcttaaaa gattagaagt tttgagaccc atcagagaag atgaagttcc tcctatggtt
      121 gaagatattt ttaatcattc ttctaatcat gatttttcta cggtcgcatt tggctagcac
      181 ttgaaggtgt caaaggaaac gacagttatt ttccgttcat gacattttat tttgtttgaa
      241 gttattttgt tcatggtggg taaaacttaa acaagatagt ggaacagaca actaatttag
      301 aaaattagta aatagttctt ggatgtacat aacttacttc actatatgct tctccctttg
      361 ccgcaagtca acaaagtatg atatttggaa tagcttcaga cgagtatttc ggtatgccaa
      421 ggaatgactc tttcactgat ttgctgcatc agcttcccag tattgggtcc ctccaagagg
      481 ctattgtttg atatgtagca attatattat atatgcgtat tattgcattg atgaagaatc
      541 atttaacctt aggttgcatt ggtgatattg ttctatcatt tcgtcaactg tttagtttct
      601 tat
//
LOCUS       XM_071886262            1826 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904328), mRNA.
ACCESSION   XM_071886262
VERSION     XM_071886262.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1826
                     /gene="LOC139904328"
                     /note="uncharacterized LOC139904328; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904328"
     CDS             136..1647
                     /gene="LOC139904328"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742363.1"
                     /db_xref="GeneID:139904328"
                     /translation="MATIAMDSSSSLYPPPVVPMKLHIENREKLLKHLRQNLDLSSRP
                     LHGFVLLQGGEEQTRYCTDHEDLFRQESYFAYLFGVREPGFYGAIDVNTGKSILFAPR
                     LPAEYAVWMGEIKTLNHFKETYMVSMVYYTDEIIEVLYNQYQGTGKPLLFLLHGLNTD
                     SNNFSKPAEFEGIEMFERDLNTLHPILTECRVLKSKLELAVIQYANDISSEAHVEVMR
                     KTKPEMKEYQMESIFLHHTYFYGSCRHCSYTCICATGDNSSVLHYGHAAAPNDRTLRD
                     GDMALLDMGAEFHFYGSDITCSFPVNGKFTSDQRLIYNAVLDAHDSVISAMKPGVNWV
                     DMHKLAEKVVLQTLMKGHLLIGDVDEMMVERLGSVFMPHGLGHLMGLDTHDPGGYLKG
                     AERPKEPGLRSLRTSRDLMDGMVITVEPGCYFIDALLIPAMESSKTSKFFNREAITKF
                     RGFGGVRIESDLYITSSGCVNMTKVPRKIEDVEAVMSGAPWPIQKSAFENGGS"
     misc_feature    187..621
                     /gene="LOC139904328"
                     /note="Aminopeptidase P, N-terminal domain; Region: AMP_N;
                     smart01011"
                     /db_xref="CDD:198079"
     misc_feature    730..1557
                     /gene="LOC139904328"
                     /note="E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase,
                     X-Pro dipeptidase, proline dipeptidase., imidodipeptidase,
                     peptidase D, gamma-peptidase. Catalyses hydrolysis of
                     Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline
                     analogs. No action on Pro-Pro; Region: Prolidase; cd01087"
                     /db_xref="CDD:238520"
     misc_feature    order(919..921,982..984,1015..1017,1264..1266,1390..1392,
                     1510..1512)
                     /gene="LOC139904328"
                     /note="active site"
                     /db_xref="CDD:238520"
     polyA_site      1826
                     /gene="LOC139904328"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgtgatgga gggatgagat cattttatca tatcattatg gatggctagg atttaatttt
       61 gagtggagtt atcacctatt actcactttc ttattagtac tcgcgaagag tgtgaacgaa
      121 gcacgctgcc tgacgatggc gacgatcgcc atggattctt catcttcgct gtatccacct
      181 cctgtagttc cgatgaaact tcatatcgaa aaccgtgaaa aactgttgaa acacctccgt
      241 caaaacctag atttatcatc tcgtccttta cacggatttg tacttcttca gggaggagag
      301 gagcaaactc gttactgcac tgatcacgaa gacctattta ggcaggaaag ttattttgct
      361 tatttgtttg gagtgcgaga gcctggtttt tatggagcta ttgatgtaaa tactgggaaa
      421 tcaatcctat ttgctcccag attgcctgct gagtatgctg tatggatggg ggaaataaag
      481 acattaaacc atttcaaaga aacttacatg gttagcatgg tgtattatac tgatgaaatt
      541 atagaagtac tttataatca gtaccaggga actgggaagc ccctgttgtt tcttctacat
      601 ggattgaata ccgatagcaa taacttctct aaaccagcag aatttgaggg tattgagatg
      661 tttgagagag atcttaacac tttgcaccct attctgaccg aatgccgtgt tttgaagtca
      721 aaactggagc ttgctgtcat ccagtatgcc aatgatataa gttccgaagc tcatgttgag
      781 gtaatgagga aaaccaaacc agaaatgaag gagtatcaga tggaaagcat atttcttcat
      841 cacacctact tttacggtag ctgtaggcat tgttcatata cttgtatctg tgcaactggt
      901 gacaacagtt ctgtacttca ttatgggcat gcagcagctc caaatgacag gacattgcgg
      961 gatggagata tggcgttgct ggatatggga gctgaatttc atttttatgg gtctgacata
     1021 acctgctcct ttcctgtgaa cggtaaattt accagtgacc agcgtcttat ttacaatgct
     1081 gtcctcgacg ctcatgactc tgttatatct gccatgaagc caggagtaaa ctgggtagat
     1141 atgcataaat tggcagagaa agttgttctt caaacactga tgaaaggaca tctcctcatt
     1201 ggtgatgttg atgaaatgat ggtcgaacga ctgggttctg tttttatgcc acatgggcta
     1261 ggacacctca tgggactcga tacccatgat cctggtggct acctaaaggg agctgaaaga
     1321 cccaaagaac cggggttaag gtccctgcgc acgagtagag atctcatgga tgggatggtc
     1381 atcacggttg aacctggatg ctatttcatt gatgcgttgt tgatcccggc catggaatct
     1441 tcaaaaacat caaaattctt caatcgggaa gcaatcacta aatttagagg atttggtgga
     1501 gttcgaattg agagtgattt gtacattacc tcttctggtt gcgtgaatat gacaaaggtc
     1561 ccgaggaaaa tagaggatgt tgaagctgtg atgagtggtg caccgtggcc aatccagaaa
     1621 tctgcatttg aaaatggagg atcttagatt atttgctggt cgccatgtaa tcaatttagg
     1681 ttttactcta tcgtaatgct gtttaaagga gatatggatg ttggtttgaa tctaagatag
     1741 accatgcgat atatgggaca tgggctgact ctgcttattg ttttatcttt gtctaataaa
     1801 taaagtttaa atcttttggt ccacaa
//
LOCUS       XM_071886263            1171 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904329), mRNA.
ACCESSION   XM_071886263
VERSION     XM_071886263.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1171
                     /gene="LOC139904329"
                     /note="uncharacterized LOC139904329; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904329"
     CDS             22..954
                     /gene="LOC139904329"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742364.1"
                     /db_xref="GeneID:139904329"
                     /translation="MAIINISVMFNSLILSLILLLCVSNIQISYAAKQAGVARREDVP
                     FIKCQVCEKLAKELYVQVQDKQHQIAPKKILEYDVIEISENVCNLKKREADWMLKIDI
                     VEKGDRLELVEQESEGQCGSECKTIERACQEVIGDYDTDVAEYIYKKKPQLSSLVNFL
                     CKDLTEACSTKPPPVPKGREPGETFVPKSEKEAEMEKMLKSMEGMPGAPGMKVYSREE
                     LMSGKSLDDEDADEDEEDEPSIPSNFGKILREQESSSSKKVDWKEKITKGIKDIGEAT
                     KKHATKMSFKLQKWWKAKKARFTQQKSKSGKVEL"
ORIGIN      
        1 cggatcttac acacactaat aatggcgata atcaatatat cagtgatgtt taattcatta
       61 attttaagtc tgatactatt attatgcgta tcaaatatac aaatatcgta tgctgcaaaa
      121 caagccggag ttgctcgaag agaagatgtg ccgtttatta aatgtcaagt atgtgagaag
      181 cttgcgaagg aattatacgt acaagttcaa gataaacaac atcagattgc acctaagaag
      241 attttagagt atgacgtaat cgagatttcg gaaaatgtgt gtaatttgaa gaaacgagaa
      301 gctgattgga tgctgaaaat tgatattgtg gagaagggcg atagattgga gcttgttgag
      361 caagaatctg aaggtcaatg cggttcagaa tgcaaaacca tcgaacgagc ttgtcaagag
      421 gttattggag actatgacac ggatgtggca gagtatatat acaaaaagaa gcctcagttg
      481 agttcattgg ttaattttct atgtaaagat ctcactgaag catgtagtac taagccgcca
      541 ccagttccta agggtaggga gccaggggaa acttttgtcc cgaagtctga gaaggaggct
      601 gaaatggaga agatgttgaa gtcgatggag ggcatgcctg gagcacctgg catgaaagtg
      661 tactcaaggg aggaactcat gagtggtaaa agcttggacg atgaagacgc agacgaagat
      721 gaagaggatg aaccgtcgat tccttcaaat ttcggaaaga tattgaggga acaagagagc
      781 agcagcagca agaaggtgga ctggaaggag aagatcacaa aagggattaa agatattggt
      841 gaagcaacaa aaaaacatgc aactaaaatg tcttttaagt tgcaaaaatg gtggaaagcg
      901 aagaaggcaa gattcaccca gcagaagtca aaatctggta aagtcgaatt gtagggcatg
      961 ctctgatttc aacatttttt tttttttttt tgtagtcgac tttttatgga gagtgagttg
     1021 tataattatg ctcatttaaa gaaatatgat agcttttgaa ccatgatcta cttcatttat
     1081 gaagaaattt caccatgtga tcaatttaca ttagtttgta aatcatatac taccgtcaat
     1141 tttgttaaca tttgtaattt acatacgagt t
//
LOCUS       XM_071886264            1090 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein arginine
            N-methyltransferase 1 (LOC139904330), transcript variant X1, mRNA.
ACCESSION   XM_071886264
VERSION     XM_071886264.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1090
                     /gene="LOC139904330"
                     /note="probable protein arginine N-methyltransferase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139904330"
     CDS             29..949
                     /gene="LOC139904330"
                     /codon_start=1
                     /product="probable protein arginine N-methyltransferase 1
                     isoform X1"
                     /protein_id="XP_071742365.1"
                     /db_xref="GeneID:139904330"
                     /translation="MLKDVVRTKTYQNVIYKNTFLFKDKIVLDVGAGTGILSLFCAKA
                     GAKHVYAVECSQMADMAKEIVKANGYSNVITVLKGKIEELELPVPQVDIIISEWMGYF
                     LLYENMLDTVLYARDKWLVNNGIVLPDNASLYLTAIEDAEYKEDKIEFWNNVYGFDMS
                     CIRKQSIMEPLVDTVDQNQIVTNCQLLKTMDISKMTSGDASFTAPFKLVAERDDYIHA
                     LVAYFDVAFTVCHKMTGFSTGPKTRNTHWKQTVLYLEDVLTICEGESVVGSMTVSQNK
                     KNPRDVDITLKYSLNGQRCVISRTQQYKMR"
     misc_feature    29..>511
                     /gene="LOC139904330"
                     /note="Predicted RNA methylase [General function
                     prediction only]; Region: COG4076"
                     /db_xref="CDD:443253"
ORIGIN      
        1 gccctaatac tcgttttgtt tgcaggaaat gttgaaggac gtggtgagaa ctaagactta
       61 ccaaaatgtt atttataaga atacattttt gttcaaggac aaaattgttc ttgatgttgg
      121 tgctggaaca gggattcttt ctctcttttg tgcaaaagct ggggcaaaac acgtttatgc
      181 tgttgagtgc tcacaaatgg ctgacatggc gaaagagatt gtcaaggcaa atggctattc
      241 aaatgttata actgttttga aaggaaagat agaagaactt gagcttcctg tacctcaagt
      301 cgatatcata atctcagaat ggatgggata cttcttatta tacgaaaaca tgttagatac
      361 agttttatat gctcgggata agtggctggt taacaacgga attgtgttgc ctgataatgc
      421 ttctctctat ctgacagcaa tcgaggatgc agagtacaag gaggataaga ttgaattttg
      481 gaacaatgtg tatggttttg acatgagctg catcagaaag cagtccatta tggaaccact
      541 tgttgacacg gtcgaccaga atcagattgt cacaaactgc caattactca agacaatgga
      601 catctctaag atgacatctg gagatgcttc attcacagca ccctttaagc tggtagctga
      661 gcgtgatgat tacattcatg ctctagtagc atacttcgat gtagcattta ctgtatgtca
      721 caaaatgact gggttctcta cagggccaaa gactaggaat acacattgga agcagactgt
      781 gctatacttg gaagatgtgc tgactatatg tgaaggtgaa tccgttgttg gaagcatgac
      841 tgtgtcacaa aacaagaaga atccacgaga tgtcgacatc actctcaaat actcgttaaa
      901 tggtcaacgt tgtgttatct cgagaaccca gcaatacaaa atgcgttagt acacacctag
      961 tgtctcaaac acagggtcat gcatcttaca actcgttaac tgggatagac aaattatgat
     1021 gttacgaaat tgatgatttg ttaagaaaag ttgatatcac tatactgcaa aagaacttca
     1081 taaccataat
//
LOCUS       XM_071886265            1527 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein arginine
            N-methyltransferase 1 (LOC139904330), transcript variant X2, mRNA.
ACCESSION   XM_071886265
VERSION     XM_071886265.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1527
                     /gene="LOC139904330"
                     /note="probable protein arginine N-methyltransferase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 16 Proteins"
                     /db_xref="GeneID:139904330"
     CDS             170..1282
                     /gene="LOC139904330"
                     /codon_start=1
                     /product="protein arginine N-methyltransferase 1.1 isoform
                     X2"
                     /protein_id="XP_071742366.1"
                     /db_xref="GeneID:139904330"
                     /translation="MNDASKPTKIKFEYEDDDDETIEQVATGSSNLDEDSTMCEPADA
                     DKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVIYKNTFLFKDKIVLDVGAGTGILS
                     LFCAKAGAKHVYAVECSQMADMAKEIVKANGYSNVITVLKGKIEELELPVPQVDIIIS
                     EWMGYFLLYENMLDTVLYARDKWLVNNGIVLPDNASLYLTAIEDAEYKEDKIEFWNNV
                     YGFDMSCIRKQSIMEPLVDTVDQNQIVTNCQLLKTMDISKMTSGDASFTAPFKLVAER
                     DDYIHALVAYFDVAFTVCHKMTGFSTGPKTRNTHWKQTVLYLEDVLTICEGESVVGSM
                     TVSQNKKNPRDVDITLKYSLNGQRCVISRTQQYKMR"
     misc_feature    353..>844
                     /gene="LOC139904330"
                     /note="Predicted RNA methylase [General function
                     prediction only]; Region: COG4076"
                     /db_xref="CDD:443253"
ORIGIN      
        1 aaactaacca agccaagcag acaaaacaaa catattccaa ttccaatcgt ataaatatcc
       61 ctagtaaacc ctaaaacttc aactacataa accctaaaaa taccaaagct cgctgtacaa
      121 gtaaattaat tgatacggag ggagtaatac agaaggtgga actttaacaa tgaatgatgc
      181 tagtaaacct acaaagatca aattcgagta cgaagatgat gatgatgaaa caattgaaca
      241 agttgctacc ggcagctcca accttgatga agattcaacc atgtgcgagc ccgcagacgc
      301 tgataaaacc agcgccgatt attacttcga ttcctactct cacttcggta ttcatgagga
      361 aatgttgaag gacgtggtga gaactaagac ttaccaaaat gttatttata agaatacatt
      421 tttgttcaag gacaaaattg ttcttgatgt tggtgctgga acagggattc tttctctctt
      481 ttgtgcaaaa gctggggcaa aacacgttta tgctgttgag tgctcacaaa tggctgacat
      541 ggcgaaagag attgtcaagg caaatggcta ttcaaatgtt ataactgttt tgaaaggaaa
      601 gatagaagaa cttgagcttc ctgtacctca agtcgatatc ataatctcag aatggatggg
      661 atacttctta ttatacgaaa acatgttaga tacagtttta tatgctcggg ataagtggct
      721 ggttaacaac ggaattgtgt tgcctgataa tgcttctctc tatctgacag caatcgagga
      781 tgcagagtac aaggaggata agattgaatt ttggaacaat gtgtatggtt ttgacatgag
      841 ctgcatcaga aagcagtcca ttatggaacc acttgttgac acggtcgacc agaatcagat
      901 tgtcacaaac tgccaattac tcaagacaat ggacatctct aagatgacat ctggagatgc
      961 ttcattcaca gcacccttta agctggtagc tgagcgtgat gattacattc atgctctagt
     1021 agcatacttc gatgtagcat ttactgtatg tcacaaaatg actgggttct ctacagggcc
     1081 aaagactagg aatacacatt ggaagcagac tgtgctatac ttggaagatg tgctgactat
     1141 atgtgaaggt gaatccgttg ttggaagcat gactgtgtca caaaacaaga agaatccacg
     1201 agatgtcgac atcactctca aatactcgtt aaatggtcaa cgttgtgtta tctcgagaac
     1261 ccagcaatac aaaatgcgtt agtacacacc tagtgtctca aacacaggta taacgtgttc
     1321 caaggtgttc cattgcaggt taaattcttg ttgaagatct tctcctattt tatgtatcaa
     1381 atttgtaaca tgaatttatt ctttttattc aatctcatgg tcatgcatct tacaactcgt
     1441 taactgggat agacaaatta tgatgttacg aaattgatga tttgttaaga aaagttgata
     1501 tcactatact gcaaaagaac ttcataa
//
LOCUS       XM_071886266            1398 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NDL1-like
            (LOC139904331), mRNA.
ACCESSION   XM_071886266
VERSION     XM_071886266.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1398
                     /gene="LOC139904331"
                     /note="protein NDL1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 44
                     Proteins"
                     /db_xref="GeneID:139904331"
     CDS             79..1140
                     /gene="LOC139904331"
                     /codon_start=1
                     /product="protein NDL1-like"
                     /protein_id="XP_071742367.1"
                     /db_xref="GeneID:139904331"
                     /translation="MVDYSDSVSVDMETIYLGGKEHIIRTGHGSVSVIVYGDQEKPPL
                     ITYPDLALNHMLCFQGLFFCPEAASLLLHNFCIYHISPPGHELGAAAICPDEPLLSVE
                     DLCDQILEVLNYFRLGAVMCMGAMAGAYILTLFATKYRDRVTGLILVSPLCKAPSWTE
                     WFYNKLMSNLLYYYGMCGLLKECLLQRYFSKEVRGNPEIPESDIVQSCRKLLDERQSV
                     NVWRYLQAIDKRPDISEGLKKLKCRTLIFVGDSSPFHSEALHMTGKLDRRYSALVEVQ
                     VCGSMVTEEQPHAMLIPMEYFLMGYGLYRPNPFTGSPRSPLSPSCIAPELLSPESMGL
                     KLKPIKTRVSSPHSNTIER"
     misc_feature    139..993
                     /gene="LOC139904331"
                     /note="Ndr family; Region: Ndr; pfam03096"
                     /db_xref="CDD:397285"
ORIGIN      
        1 ggaatagaga gagagagaga gagagagaga gagagagaga gagagagaga gagagagaac
       61 agctagagga aaacggctat ggtggattac agtgattccg tctctgttga tatggaaact
      121 atctatcttg gtggaaagga acatattatt cgcactggcc atggttctgt atctgtaatc
      181 gtgtacggcg accaagaaaa gccaccattg attacttatc ctgatttagc tctaaatcat
      241 atgttgtgtt ttcaaggact tttcttttgc cctgaagctg cttccttgct cctccacaat
      301 ttctgcattt atcacatcag tccacctggg cacgagttag gagcagcagc aatatgtccc
      361 gatgaacccc ttctatcagt cgaggatctt tgcgatcaga ttctcgaggt cctcaattat
      421 ttcaggcttg gtgcagtgat gtgcatgggg gcaatggcag gtgcctacat acttacactc
      481 tttgcgacaa agtatagaga cagagttact ggtttaatac ttgtttctcc tctttgcaaa
      541 gcaccttcat ggaccgaatg gttttacaat aagttgatgt caaatttgct gtactactat
      601 ggtatgtgtg gtctattaaa agagtgttta cttcaaagat atttcagcaa ggaagttcgt
      661 ggtaacccag aaatcccgga atcagatata gttcaatcat gcagaaagtt gttggatgaa
      721 agacagagtg tcaatgtgtg gcggtatctt caggcaatcg acaagagacc tgacatcagc
      781 gagggtttaa agaaactaaa atgcagaaca ctcatatttg ttggtgacag ctcaccgttt
      841 cattcagaag ctcttcacat gaccgggaaa ttggaccgac gatatagtgc tttagttgag
      901 gtacaagttt gtggatcaat ggtgaccgaa gagcaaccac atgcaatgct gatacccatg
      961 gagtattttc taatggggta cgggctttat aggccgaacc cattcacagg tagcccgaga
     1021 agcccgctaa gtccatcttg cattgcccca gagttactat ctcccgaaag catggggttg
     1081 aagctaaaac cgataaaaac tcgagtgtca tctcctcatt caaacaccat cgagaggtag
     1141 atatcggctt tatttaagaa gatgcttcac gggtttgcgt acagtttgtt ggtaaatttt
     1201 tgtcattttt tggttttggg ttcaattcaa tgggtatata catatgatat atgtagatat
     1261 agaggagaaa cggggaaaat attattcttt taaatggtgg acataatatt caattgtagg
     1321 atttgtggtc ataaaacaga aacattgtat ttatttatta tgatggaaag caataatacc
     1381 ttctctcttt ttttagcc
//
LOCUS       XM_071886267            1171 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine acetyltransferase
            5-like (LOC139904332), mRNA.
ACCESSION   XM_071886267
VERSION     XM_071886267.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1171
                     /gene="LOC139904332"
                     /note="serine acetyltransferase 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139904332"
     CDS             20..889
                     /gene="LOC139904332"
                     /codon_start=1
                     /product="serine acetyltransferase 5-like"
                     /protein_id="XP_071742368.1"
                     /db_xref="GeneID:139904332"
                     /translation="MPAGEPRYPWPALTADPDEEASWVWAEIKAEARRDAESEPALAS
                     YLYSTILCHSTLDRSLSFHLGNKLCSSTLLSTLLYDLFLNTFSVDPDLRLAAVADLRA
                     ARSRDPACVSFSHCLLNYKGFLACQAHRVAHKLWTQSRRPLALALQSRISDVFAVDIH
                     PGAKLGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKAGGDRHPKIADGVLIG
                     AGATILGNVKIGAEAKIGAGSVVLIDVPPRATAVGNPARLVEGKEASKLEECPGMSMD
                     HTSFISDWSDYTI"
     misc_feature    20..886
                     /gene="LOC139904332"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; Region: LbetaH;
                     cl00160"
                     /db_xref="CDD:469633"
     misc_feature    order(485..487,491..493,536..538,638..640,728..730,
                     737..739,743..745)
                     /gene="LOC139904332"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:100045"
     misc_feature    order(533..538,593..598,614..619,638..643,674..676,
                     719..721,725..730,737..739,743..745,767..769,782..784)
                     /gene="LOC139904332"
                     /note="active site"
                     /db_xref="CDD:100045"
     misc_feature    order(533..538,614..616,638..643)
                     /gene="LOC139904332"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:100045"
     misc_feature    order(593..598,614..619,674..676,719..721,725..730,
                     737..739,743..745,767..769,782..784)
                     /gene="LOC139904332"
                     /note="CoA binding site [chemical binding]; other site"
                     /db_xref="CDD:100045"
     polyA_site      1171
                     /gene="LOC139904332"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtgctgtaaa ctgtaaccaa tgccggccgg tgaaccccgt tacccatggc cagcgttaac
       61 ggcggaccca gacgaagaag catcatgggt atgggcagaa atcaaggcgg aagcccgccg
      121 tgacgccgaa tcggaaccgg cgttagccag ttacttatac tccacaattc tgtgtcattc
      181 aactttagat cgatcacttt catttcatct tggaaataaa ctttgttctt ccactttgtt
      241 atcaactttg ctttatgatc tgtttcttaa tacgttttct gttgaccctg atctccggtt
      301 agccgccgtt gccgatttac gtgctgctag gtcacgtgac cctgcttgtg tatcgttttc
      361 tcattgtttg cttaattata aaggcttcct tgcttgtcag gctcatcggg tggctcataa
      421 gctatggact caatcccgac gaccactagc cctagcttta cagtctcgga tctctgatgt
      481 tttcgctgta gacattcacc ctggtgctaa acttggaaaa ggaatactat ttgaccatgc
      541 aacaggtgtt gttgtaggtg agaccgctgt tattggcaac aatgtctcca ttcttcacca
      601 cgtgacttta ggaggcacgg gcaaggctgg tggggaccgc cacccaaaga tcgcagatgg
      661 ggtgttgatt ggtgcagggg caactatatt gggtaatgta aagattggtg cagaagcgaa
      721 aattggtgcg ggatcggttg ttttgatcga tgtgccacca cgagcaacgg cagtagggaa
      781 cccagcaagg ttggttgaag ggaaagaagc atcaaagctt gaagagtgtc ctgggatgtc
      841 tatggatcat acatcattca tatcagattg gtctgattac acaatatgaa ttcatgcttc
      901 taatatttac cattttgtta cttttatgcg tgcagtgtca tcaaacctat ataaagctgc
      961 caaagcgaaa caatagtatt attgtttgac tgggctgggc atatgataat ttaggttcag
     1021 atcgcgtttg atcgttcaag tttagccatt tgaatttatc tataacatgt tgtttggcca
     1081 tttggctaag atgaagttgt agtgtgtgaa taatatttag tgaatacaat aataagatgc
     1141 tatgggcatg atggtttgat acttgagttc a
//
LOCUS       XM_071886268            1695 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein EFFECTOR OF
            TRANSCRIPTION 2-like (LOC139904333), transcript variant X1, mRNA.
ACCESSION   XM_071886268
VERSION     XM_071886268.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1695
                     /gene="LOC139904333"
                     /note="protein EFFECTOR OF TRANSCRIPTION 2-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139904333"
     CDS             151..1437
                     /gene="LOC139904333"
                     /codon_start=1
                     /product="protein EFFECTOR OF TRANSCRIPTION 2-like"
                     /protein_id="XP_071742369.1"
                     /db_xref="GeneID:139904333"
                     /translation="MVITVNATVSSLLKREDCKRTKHDSAFSNWKILIGPCDWEDYLS
                     NKEGAQRYRTHNLPNCSSCPGLYELGIVVLLSQTKRNSRGQLSSKNIIPVYLGQADNV
                     RTRLQQYGRDGAHLENGLSNGEQPGRKVLGLFSDIFSCGFAIAFRWAPMENKKIAEKT
                     ESQLLETFDYAWNRGMNGDRRTFDILKKVKAAASSSKRSHLVFKKLKVIPTKEVGLRI
                     KRCEPPVLENRSTFYYNNQKNTNFFSRIFKFTRSRPTLVSKEGNNMSNNEGGTCGVAL
                     GQGSICTRNPVEGRKRCIDHKGMKINAFVKTRLHTNTEDTLNLACGVTLDDGSFCTKV
                     PVAGRKQCEEHKGMRIKMENKHCLPSSCLDLETGTLSILKNEYSNDTGVESLTCVAIT
                     LNSSVCKRKPGKDSKYCWQHEAARAKINHSSHDSDL"
     misc_feature    229..708
                     /gene="LOC139904333"
                     /note="GIY-YIG domain-containing protein; Region:
                     GIY_YIG_domain; pfam19239"
                     /db_xref="CDD:466008"
ORIGIN      
        1 gcgtaaagaa tagaataatt tgggggacac ttttactttt ttcaaaacaa ctaaccggcg
       61 ccgcttatgt taaagattaa actgtaaatc tgtaatgggc ggttatttgc agtgtaacgt
      121 tggttcctgt atcggtacgg cggagccacg atggtgataa ccgttaacgc caccgtatca
      181 tcgctgttga agagggaaga ctgtaaacgc actaaacacg attcggcttt ctccaattgg
      241 aagatactaa ttgggccttg tgattgggaa gattatttgt cgaacaagga aggtgcacag
      301 agatacagaa ctcacaatct tccaaattgt tcgtcttgtc cagggcttta cgagctcggg
      361 atagttgttt tactttcaca aacaaagagg aatagtagag gccaacttag ctccaaaaac
      421 ataattcctg tttatcttgg acaagcagat aatgttagga ccagacttca gcagtatggt
      481 cgagatggtg ctcatttgga gaatggcttg tctaatggtg agcaacctgg ccgcaaagtc
      541 cttggactgt tttcagatat attctcgtgt ggatttgcca ttgcatttag atgggccccg
      601 atggaaaata aaaaaattgc tgagaagaca gaatcccagc ttttagaaac cttcgattat
      661 gcatggaaca gggggatgaa tggggatcgt cgcacttttg acatacttaa aaaagtcaaa
      721 gcggctgctt caagttctaa aaggtcacat ctggtattca agaagcttaa ggtaatccca
      781 acaaaggaag taggtcttag gatcaaaaga tgtgaaccac ccgtgttaga aaacagatct
      841 actttctact ataacaacca aaagaacaca aatttcttct ctagaatttt caagttcacc
      901 cgatcgcgcc ccacattagt atcaaaagaa ggtaataata tgagcaacaa tgaaggaggt
      961 acatgtggtg tagccttggg tcaagggtct atatgtacaa ggaatccagt tgaaggaaga
     1021 aagagatgta ttgaccataa agggatgaaa atcaacgcat ttgtaaaaac tcgtttacat
     1081 actaacacag aagacactct taatcttgct tgcggggtca ccttagatga tggttctttc
     1141 tgtacaaaag tgcctgttgc gggaagaaaa caatgtgaag agcataaagg aatgagaatc
     1201 aagatggaaa ataaacattg tttaccaagc tcttgtttag atttagaaac tggtacactt
     1261 agcattctga aaaatgagta tagtaatgat actggtgttg aatcattgac ttgtgtagcc
     1321 atcacactaa atagttccgt atgcaaaagg aaaccaggta aggatagtaa gtattgctgg
     1381 caacatgagg cggcgagggc gaagattaat cactcatctc acgattcaga cttatgatta
     1441 ttctaactgt tcttcaattt atgaggatac aaaggagctc tcagaattaa agcatgtaac
     1501 acctaagaat tagttaaaat tgagtttcat ctttgagaca ccattaccca ttcattcata
     1561 ctcccgagaa aggtattatt tatacaatcc atatgataca atttttttct tcatatagtt
     1621 atttgttgta ttgtaagagg ccatggattt aatagctgtc ctactacaag tcttcaataa
     1681 aaaggctttg gtgtt
//
LOCUS       XM_071886269            1617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein EFFECTOR OF
            TRANSCRIPTION 2-like (LOC139904333), transcript variant X2, mRNA.
ACCESSION   XM_071886269
VERSION     XM_071886269.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1617
                     /gene="LOC139904333"
                     /note="protein EFFECTOR OF TRANSCRIPTION 2-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139904333"
     CDS             73..1359
                     /gene="LOC139904333"
                     /codon_start=1
                     /product="protein EFFECTOR OF TRANSCRIPTION 2-like"
                     /protein_id="XP_071742370.1"
                     /db_xref="GeneID:139904333"
                     /translation="MVITVNATVSSLLKREDCKRTKHDSAFSNWKILIGPCDWEDYLS
                     NKEGAQRYRTHNLPNCSSCPGLYELGIVVLLSQTKRNSRGQLSSKNIIPVYLGQADNV
                     RTRLQQYGRDGAHLENGLSNGEQPGRKVLGLFSDIFSCGFAIAFRWAPMENKKIAEKT
                     ESQLLETFDYAWNRGMNGDRRTFDILKKVKAAASSSKRSHLVFKKLKVIPTKEVGLRI
                     KRCEPPVLENRSTFYYNNQKNTNFFSRIFKFTRSRPTLVSKEGNNMSNNEGGTCGVAL
                     GQGSICTRNPVEGRKRCIDHKGMKINAFVKTRLHTNTEDTLNLACGVTLDDGSFCTKV
                     PVAGRKQCEEHKGMRIKMENKHCLPSSCLDLETGTLSILKNEYSNDTGVESLTCVAIT
                     LNSSVCKRKPGKDSKYCWQHEAARAKINHSSHDSDL"
     misc_feature    151..630
                     /gene="LOC139904333"
                     /note="GIY-YIG domain-containing protein; Region:
                     GIY_YIG_domain; pfam19239"
                     /db_xref="CDD:466008"
ORIGIN      
        1 ttgttttaat gaagagccta ttaataaaaa ggagtgtaac gttggttcct gtatcggtac
       61 ggcggagcca cgatggtgat aaccgttaac gccaccgtat catcgctgtt gaagagggaa
      121 gactgtaaac gcactaaaca cgattcggct ttctccaatt ggaagatact aattgggcct
      181 tgtgattggg aagattattt gtcgaacaag gaaggtgcac agagatacag aactcacaat
      241 cttccaaatt gttcgtcttg tccagggctt tacgagctcg ggatagttgt tttactttca
      301 caaacaaaga ggaatagtag aggccaactt agctccaaaa acataattcc tgtttatctt
      361 ggacaagcag ataatgttag gaccagactt cagcagtatg gtcgagatgg tgctcatttg
      421 gagaatggct tgtctaatgg tgagcaacct ggccgcaaag tccttggact gttttcagat
      481 atattctcgt gtggatttgc cattgcattt agatgggccc cgatggaaaa taaaaaaatt
      541 gctgagaaga cagaatccca gcttttagaa accttcgatt atgcatggaa cagggggatg
      601 aatggggatc gtcgcacttt tgacatactt aaaaaagtca aagcggctgc ttcaagttct
      661 aaaaggtcac atctggtatt caagaagctt aaggtaatcc caacaaagga agtaggtctt
      721 aggatcaaaa gatgtgaacc acccgtgtta gaaaacagat ctactttcta ctataacaac
      781 caaaagaaca caaatttctt ctctagaatt ttcaagttca cccgatcgcg ccccacatta
      841 gtatcaaaag aaggtaataa tatgagcaac aatgaaggag gtacatgtgg tgtagccttg
      901 ggtcaagggt ctatatgtac aaggaatcca gttgaaggaa gaaagagatg tattgaccat
      961 aaagggatga aaatcaacgc atttgtaaaa actcgtttac atactaacac agaagacact
     1021 cttaatcttg cttgcggggt caccttagat gatggttctt tctgtacaaa agtgcctgtt
     1081 gcgggaagaa aacaatgtga agagcataaa ggaatgagaa tcaagatgga aaataaacat
     1141 tgtttaccaa gctcttgttt agatttagaa actggtacac ttagcattct gaaaaatgag
     1201 tatagtaatg atactggtgt tgaatcattg acttgtgtag ccatcacact aaatagttcc
     1261 gtatgcaaaa ggaaaccagg taaggatagt aagtattgct ggcaacatga ggcggcgagg
     1321 gcgaagatta atcactcatc tcacgattca gacttatgat tattctaact gttcttcaat
     1381 ttatgaggat acaaaggagc tctcagaatt aaagcatgta acacctaaga attagttaaa
     1441 attgagtttc atctttgaga caccattacc cattcattca tactcccgag aaaggtatta
     1501 tttatacaat ccatatgata caattttttt cttcatatag ttatttgttg tattgtaaga
     1561 ggccatggat ttaatagctg tcctactaca agtcttcaat aaaaaggctt tggtgtt
//
LOCUS       XM_071886270            2750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides inactive protein kinase
            SELMODRAFT_444075-like (LOC139904334), mRNA.
ACCESSION   XM_071886270
VERSION     XM_071886270.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2750
                     /gene="LOC139904334"
                     /note="inactive protein kinase SELMODRAFT_444075-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 33 Proteins"
                     /db_xref="GeneID:139904334"
     CDS             516..2486
                     /gene="LOC139904334"
                     /codon_start=1
                     /product="inactive protein kinase SELMODRAFT_444075-like"
                     /protein_id="XP_071742371.1"
                     /db_xref="GeneID:139904334"
                     /translation="MMKRQKSSTVREHHAGERVVLIAVKATKEISKNALIWALTHVVQ
                     PGDCAKLLVLIPAHTPSHKLWKFSKFNSDCSTGQWKSHSGDIRDQRDDITESCAQMML
                     QLHNIYDSDKIKMKIKVISGTLAGAVAAEAKKTRTQWVVLDKNMKKEAKVCIDQLECN
                     VVVMKKTRPKVLRLNLVGSPTKEPEPLTSRVDTHSDCFKENEHVWNTTKVPNVTPVSS
                     PEHSSFTTTEHKTSSLSSSELGFSPFLVADHDWDTKKDEFLDESDSDTNSENLSSSPS
                     PSLCSPWMADVYCSSDEFFKEKTFKSNEKIYNNPITDALRLKFTELDHQLEKSNKNMR
                     EIIPVTRHLPPKSPSLCTICQHKAPMFGVPPKWFSFSELEDATDGFSKTNYLAEGGYG
                     SVHRGVLKDGRMVAVKQHKVASTQGDNEFFSEVEVLSCAQHRNVVMLIGFCVEDGRRL
                     LVYEYICNGSLDSHLYGCDHGVLEWSARQKIAIGAARGLRYLHEECRVGCIVHRDMRP
                     NNILLTHDFEALVGDFGLARWQPDGETGVETRIIGTFGYLAPEYAQTGEITEKADVYS
                     FGVVLVELITGRKAVDINRPKGQQYLTEWVRPLLEENAITELIDPRLKDSYSESAVQC
                     MSQCASLCIRRDPYSRPRMSQVLMMLENDDFK"
     misc_feature    567..>941
                     /gene="LOC139904334"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; Region: AANH_superfamily; cl00292"
                     /db_xref="CDD:469708"
     misc_feature    1671..2471
                     /gene="LOC139904334"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1671..1685,1695..1697,1731..1733,1737..1739,
                     1824..1826,1872..1883,1893..1895,1899..1901,2028..2030,
                     2034..2036,2040..2045,2049..2051,2082..2084,2091..2093,
                     2142..2153)
                     /gene="LOC139904334"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1671..1685,1695..1697,1731..1733,1737..1739,
                     1824..1826,1872..1883,1893..1895,2028..2030,2034..2036,
                     2040..2045,2049..2051,2082..2084)
                     /gene="LOC139904334"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1683..1685,1893..1895,1899..1901,2028..2030,
                     2034..2036,2040..2042,2091..2093,2142..2153)
                     /gene="LOC139904334"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(2079..2102,2133..2153)
                     /gene="LOC139904334"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 atagtaatat aaacagtatg gtacaaataa tgtgatccga ttacctttgc aggctttctt
       61 tctttgtttt ctttttcatc tttccctcat gcatttcttg tgaaatcttt gaccaaaagt
      121 gttccctcaa aatcatcttt tgggctctga ttttggtata aaagttacca cattttcttg
      181 ctttatatca ttaaaaaatt gtatattgtt agtgggtact tgattatttc agcaaacaag
      241 ggaattggga tattgggtct ctttcatttt gggtaaaagt gttgataaac atactttttg
      301 ggcactgatt ttggaaaaac gttaccacat tttcttagtt tcagataatt tattgaaaaa
      361 caaaatagaa tctgttagtg ggtgtaaaat tatttgatca aataaggaaa ttggcagttg
      421 ggttcttttc cattttgggt taatcttgct atcttcagca attttaattt tttttttttt
      481 tttttttgtt ggtaaatatt tttagtgctt gaaaaatgat gaagaggcaa aagagtagta
      541 cagttagaga acatcatgca ggggagagag ttgtgctaat tgctgtgaaa gcaaccaaag
      601 aaatttcaaa aaatgctttg atttgggctt tgacccatgt cgttcaacct ggtgactgtg
      661 ctaagttgct ggtgctcatc cctgctcaca ctccaagtca taaattatgg aaattttcga
      721 aattcaatag cgattgctct acggggcaat ggaaatctca ttcgggtgat attagagatc
      781 agagagacga tatcaccgaa tcgtgcgctc aaatgatgct tcaactccat aatatatatg
      841 attcagacaa gataaaaatg aaaataaagg tcatttctgg cacccttgct ggagctgtgg
      901 ctgctgaagc aaagaaaact cgaacgcaat gggttgtttt ggataagaac atgaagaaag
      961 aggcgaaagt atgcattgac caactagaat gcaatgtcgt tgtgatgaaa aaaacccgcc
     1021 caaaagtact tcgcttgaat ttagttggat caccaacaaa agagcctgaa ccattaactt
     1081 ctcgtgtaga cacacactca gattgtttta aagaaaatga acatgtttgg aatacaacta
     1141 aagtcccaaa cgtgactccc gtaagcagtc ctgaacattc atcgttcacc acaaccgaac
     1201 ataaaacatc ttctttgtca agttcagagc tcggtttctc tccgtttttg gtagctgatc
     1261 acgattggga tacaaagaaa gatgagtttc ttgatgaatc tgattctgat accaatagcg
     1321 agaatttgag ttcttcgcca tcaccaagtt tatgttctcc atggatggct gatgtttatt
     1381 gttcttcaga tgaatttttt aaagaaaaaa cttttaaatc caacgaaaaa atctataaca
     1441 atccgattac ggatgcactt cgtttaaaat tcaccgagct tgaccaccaa cttgaaaagt
     1501 caaacaagaa tatgagggag attattccag taacgagaca cctacctccg aaatctccat
     1561 cgctttgtac aatttgtcag cacaaagcgc ctatgtttgg ggtcccacca aaatggttca
     1621 gttttagtga gcttgaagac gctacagacg ggttttcgaa gaccaactat ttggcggaag
     1681 gtgggtacgg gtcggttcac cgaggggttt taaaagatgg tcgaatggta gcggttaaac
     1741 aacataaggt tgctagtaca caaggggata atgagttttt ttcagaagtt gaggttttaa
     1801 gctgtgcaca acatcgaaat gttgtgatgt tgattggatt ttgtgtggaa gatggacggc
     1861 ggttgcttgt ttatgaatat atttgcaatg gttctttaga ttctcacctc tatggttgtg
     1921 atcacggtgt attggaatgg tctgcacgac aaaagattgc gattggtgct gctcgaggtc
     1981 taagatatct tcatgaagaa tgcagagtag gttgtatagt tcatcgggat atgcgtccaa
     2041 acaacatact actaactcat gattttgaag ctttggttgg agattttgga ctggcgaggt
     2101 ggcaaccaga tggcgaaacg ggtgtggaaa cgagaataat tggaacgttc gggtacttgg
     2161 ctccagaata cgctcaaact ggtgaaatta cagaaaaggc ggatgtatac tcattcgggg
     2221 tagtgttggt tgagctgatt acaggacgaa aagctgttga tataaaccgg cccaagggcc
     2281 aacagtatct tacagaatgg gtgcggccat tactcgaaga aaatgccatt actgagttga
     2341 ttgacccgcg attaaaagac agttactccg agtcagctgt tcaatgcatg tcacaatgtg
     2401 cctcgttgtg catcagacgg gacccatatt cgaggccaag gatgtctcag gtgctcatga
     2461 tgttggagaa tgatgatttc aagtgattct ggccacattt ttcagtcaga cggttgctgg
     2521 agcagtagtt ttagtacaaa tggttcatgg attgttgaga aataaacatg ctatgcattt
     2581 attggaaatt tggaatacat gtacatatat aattaaacat aattttttta tatatatatg
     2641 accgttggat ttggggaccg ttaaaggggg actttgggga gggtggtgat gtacggaatc
     2701 tgaagtggtg tgggccgtgt tgcagaatga agtggttcga cctatttaat
//
LOCUS       XM_071886271            1140 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYBS3-like (LOC139904335), transcript variant X1, mRNA.
ACCESSION   XM_071886271
VERSION     XM_071886271.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1140
                     /gene="LOC139904335"
                     /note="transcription factor MYBS3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904335"
     CDS             71..952
                     /gene="LOC139904335"
                     /codon_start=1
                     /product="transcription factor MYBS3-like isoform X1"
                     /protein_id="XP_071742372.1"
                     /db_xref="GeneID:139904335"
                     /translation="MGRKCSHCGNIGHNSRTCTSYSRVNVSSTILVGGSGARGLRLFG
                     VQLDSPHSVVMKTCLSMDCFPSSSPLPSSASHSPSSSLSSSRVSLNDFNSDKNVSVGY
                     LSDGLIARTQEKKKGQPWSEDEHRRFLSGLEKLGKGDWRGISRNFVTTRTPTQVASHA
                     QKYFLRQASLVKKKRRSSLFDLVRGTNNKNSPQHNCSLSRTSSIDGHQQDHNENYSLI
                     DFSLSNQDNVYYNSMVKSYETAASICSQMHASPSGTIGSKSGTLDLELTLAAPKPIDQ
                     NKSSTTCLHLGPIISVI"
     misc_feature    413..571
                     /gene="LOC139904335"
                     /note="myb-like DNA-binding domain, SHAQKYF class; Region:
                     myb_SHAQKYF; TIGR01557"
                     /db_xref="CDD:130620"
     misc_feature    order(428..430,521..526,530..535,539..547,551..559)
                     /gene="LOC139904335"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
ORIGIN      
        1 gtcaatctta ttaaaactct tttttttttt ttttttttct tttttttctt caaaagaagt
       61 ttgaacaaaa atggggagaa aatgctcaca ttgtggaaac ataggccaca attcaagaac
      121 ttgcactagt tacagtagag tcaatgtcag cagcacaatt ctggtaggag gtagtggtgc
      181 aagaggatta aggctatttg gagttcaact tgactcacca cattcagtgg tcatgaaaac
      241 atgccttagc atggactgtt ttccttcttc ttcaccatta ccttcttcag cttcacattc
      301 accttcatct tctttatctt catctcgagt ttcacttaac gacttcaatt ctgataagaa
      361 tgtgtcggtt ggctatctct ctgatggtct cattgcaaga actcaagaaa aaaagaaggg
      421 tcaaccatgg tctgaagatg aacaccgacg ttttctaagc ggactcgaga agctaggaaa
      481 gggtgattgg agagggattt caagaaactt tgtgacaaca agaaccccta cacaagttgc
      541 aagtcatgct caaaagtact tccttcgtca ggcgagtctc gtcaagaaga aacgtcgttc
      601 cagcctcttt gacttggtga gggggactaa caacaagaat tcaccacaac acaattgcag
      661 tttgagtcga acaagctcaa ttgatggaca tcaacaagat cacaatgaga attattcttt
      721 gatagacttc agtttatcaa atcaagataa tgtgtattac aactcaatgg tgaaatccta
      781 tgaaactgca gcatcaatat gttcacaaat gcatgcttct ccaagtggta ctattggctc
      841 caaaagtggt actcttgatt tagaacttac acttgctgca ccaaagccca ttgaccaaaa
      901 caagtcatct actacttgcc tccaccttgg accaatcatt agtgtaattt aattagtttt
      961 gagttttaaa tttgctgtat gttaaaagta tctcaccatt ggtaattaat taaattcaat
     1021 tagtattaga actacggagt agtatgtatt agtacggccc aattgtatat atgggcttaa
     1081 ggtttttatt attattatta ttatttatac caaattgtat atatagttaa tcaatatgca
//
LOCUS       XM_071886272             786 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYBS3-like (LOC139904335), transcript variant X2, mRNA.
ACCESSION   XM_071886272
VERSION     XM_071886272.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..786
                     /gene="LOC139904335"
                     /note="transcription factor MYBS3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904335"
     CDS             74..637
                     /gene="LOC139904335"
                     /codon_start=1
                     /product="transcription factor MYBS3-like isoform X2"
                     /protein_id="XP_071742373.1"
                     /db_xref="GeneID:139904335"
                     /translation="MGRKCSHCGNIGHNSRTCTSYSRVNVSSTILVGGSGARGLRLFG
                     VQLDSPHSVVMKTCLSMDCFPSSSPLPSSASHSPSSSLSSSRVSLNDFNSDKNVSVGY
                     LSDGLIARTQEKKKGQPWSEDEHRRFLSGLEKLGKGDWRGISRNFVTTRTPTQVASHA
                     QKYFLRQASLVKKKRRSSLFDLGGEGD"
     misc_feature    416..574
                     /gene="LOC139904335"
                     /note="myb-like DNA-binding domain, SHAQKYF class; Region:
                     myb_SHAQKYF; TIGR01557"
                     /db_xref="CDD:130620"
     misc_feature    order(431..433,524..529,533..538,542..550,554..562)
                     /gene="LOC139904335"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
ORIGIN      
        1 tgggtcaatc ttattaaaac tctttttttt tttttttttt tctttttttt cttcaaaaga
       61 agtttgaaca aaaatgggga gaaaatgctc acattgtgga aacataggcc acaattcaag
      121 aacttgcact agttacagta gagtcaatgt cagcagcaca attctggtag gaggtagtgg
      181 tgcaagagga ttaaggctat ttggagttca acttgactca ccacattcag tggtcatgaa
      241 aacatgcctt agcatggact gttttccttc ttcttcacca ttaccttctt cagcttcaca
      301 ttcaccttca tcttctttat cttcatctcg agtttcactt aacgacttca attctgataa
      361 gaatgtgtcg gttggctatc tctctgatgg tctcattgca agaactcaag aaaaaaagaa
      421 gggtcaacca tggtctgaag atgaacaccg acgttttcta agcggactcg agaagctagg
      481 aaagggtgat tggagaggga tttcaagaaa ctttgtgaca acaagaaccc ctacacaagt
      541 tgcaagtcat gctcaaaagt acttccttcg tcaggcgagt ctcgtcaaga agaaacgtcg
      601 ttccagcctc tttgacttgg gaggtgaggg ggactaacaa caagaattca ccacaacaca
      661 attgcagttt gagtcgaaca agctcaattg atggacatca acaagatcac aatgagaatt
      721 attctttgat agacttcagt ttatcaaatc aagataatgt gtattacaac tcaatggtga
      781 aatcct
//
LOCUS       XR_011778738             944 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904336), ncRNA.
ACCESSION   XR_011778738
VERSION     XR_011778738.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..944
                     /gene="LOC139904336"
                     /note="uncharacterized LOC139904336; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904336"
     ncRNA           1..944
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904336"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904336"
ORIGIN      
        1 tcagccctca gagtacagcg gcaggtcgcc gttggtctac tccggtcaat tttccgtcga
       61 aggctctgta ctatccactc gtggtggtgg ttggagataa cattcttggg ctaacaatag
      121 tggattgcaa caatgtaatt ggtcatcagg ctgtggttgg catcaaatga caggacatga
      181 agtttaaggt agtgaatgct ttcttcaagt tggtgatatc aatgagatca gacaacatgt
      241 ttctatctat cgatcttcaa agccttgtga cagaacagct acctaccagg ggaaagggag
      301 taatttttac ttaaatgtat gcgagtacgc ggtctgatca gactatccct tgaccgttcc
      361 gaccctttta tctggctggc cacctgctat tgaggtttga acgtatatca agacactaac
      421 caccagacta tcttggaatg gtttgggcgt attggttatc tcacatgctt ttcatgtact
      481 tgatgtattg ataatggtac ccgtatttga agactttgat ttgatttgat atgtcaaaag
      541 gaatcaagtt gttagtttaa aaaactaaag ttggcaagtt gctgttttat ttatgttgat
      601 ttcatacgat gacaaactca ctcaaacttt atgatttgtg gagtgtggag actatcttgt
      661 ttggccaata tgatttaagg attataaccc gaattgcgtg cttggtcatg gttactcaaa
      721 tttactatca aaccactatc aaacaattga aacaaacttc caatcttgat ggctggtagt
      781 cgtttatttg ggcatcatgt caccactgat ttgctcagga cagcatttgt aatctatatg
      841 cttataactt ctatgctgtt aatgtaaaga tattttaaca agttatcact tatttgagtc
      901 ttacttcatt actttaataa cgccggctgt tagtgcaata tgag
//
LOCUS       XM_071886273            1102 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tetraspanin-2-like
            (LOC139904337), mRNA.
ACCESSION   XM_071886273
VERSION     XM_071886273.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1102
                     /gene="LOC139904337"
                     /note="tetraspanin-2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139904337"
     CDS             58..867
                     /gene="LOC139904337"
                     /codon_start=1
                     /product="tetraspanin-2-like"
                     /protein_id="XP_071742374.1"
                     /db_xref="GeneID:139904337"
                     /translation="MAVANNIIATLNFIALLCSIPIITAGIWLASKPDNECIRWIRWP
                     VLIIGILFLLLALTGFIGAYWNKQGLLAFYLFCNAALIITGLILLILAFVVTRDSGAY
                     SVPGRNYKEYQLSGYSKWLRDHITDEDHWTNIRSCLGSSNICTKMAQDSYTAPQFFAS
                     NISPLQSGCCKPPTVCGYQYVNPIMWINPTNPTGDMDCPIWNNDPNQLCYNCDSCKAG
                     LLGNVRKEWRKANVILIIAVVALICLYLIACSAYRNAQTEEIFKRYKRGWT"
     misc_feature    70..816
                     /gene="LOC139904337"
                     /note="Tetraspanin family; Region: Tetraspanin; pfam00335"
                     /db_xref="CDD:459767"
ORIGIN      
        1 tcaaacttct cattactctc cactttactt ttaataaact tcagagtcca aatattaatg
       61 gcagtagcta acaacataat agcaacactt aacttcatcg cactcttatg ctccatacca
      121 atcataaccg ccggtatttg gctcgcttct aaacccgaca acgaatgcat tcgttggatc
      181 cgttggcccg ttctcattat aggaatcttg tttctcctat tagctttaac cggttttatc
      241 ggtgcgtact ggaacaaaca aggcttatta gccttttact tgttctgtaa tgcagcttta
      301 atcattactg gtctaatttt actaatatta gcttttgtgg ttacgcgtga ctctggtgcc
      361 tattcggttc ctggaaggaa ttataaggag tatcagttaa gtggttattc caaatggtta
      421 cgtgatcaca taactgatga ggatcattgg accaatatta gatcgtgttt gggttcgtct
      481 aacatatgta ccaaaatggc ccaagattcg tatactgctc ctcagttttt tgcttctaat
      541 atttctcctc ttcagtcggg atgctgcaag cctccaacgg tgtgtgggta ccaatatgtg
      601 aacccgataa tgtggatcaa cccgacaaat ccaacaggtg atatggattg tcctatatgg
      661 aacaacgacc ctaaccaatt gtgctataat tgcgactctt gtaaagctgg tttgttgggg
      721 aacgtaagga aagaatggag gaaagccaat gtgatcttga tcatagccgt ggtggctctc
      781 atttgccttt atcttatcgc gtgtagtgcc tatagaaacg cgcaaactga agaaattttc
      841 aaaaggtaca aacgaggctg gacttgaata cttgtaccaa aagcatccca aaattaaact
      901 tgctatattt agtttcttga tgcacccaaa ttttcaagat gttgtgtttt ggggtaatgt
      961 aggttcatgg ttatgttttg ttactatttg gttgataatc tagtactcgg tattatagta
     1021 gaatgatagc ttgtggtgtg tgtatatgtt cctttttttg cacttttagt ggtataatga
     1081 aagaatgcaa gttaagaaag gg
//
LOCUS       XM_071886274             634 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides membrane protein PM19L-like
            (LOC139904338), mRNA.
ACCESSION   XM_071886274
VERSION     XM_071886274.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..634
                     /gene="LOC139904338"
                     /note="membrane protein PM19L-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904338"
     CDS             92..634
                     /gene="LOC139904338"
                     /codon_start=1
                     /product="membrane protein PM19L-like"
                     /protein_id="XP_071742375.1"
                     /db_xref="GeneID:139904338"
                     /translation="MAQTVGRNLAAPLLFLNLVMYFITLGFSAWCLNRFINGQTNHPS
                     FGGNGATEFFLEFAILASVLGIVSKFAGGNHLRAWRNDSLAAAGSSSLVAWAVTVLAF
                     GLACKEINVGGHRGWRLKMIEAFIIILTFTELLYVLLVHAGLYSSRYGPGYRDTDYGM
                     GTHPADTGVKGTTGVGGTRV"
     misc_feature    134..520
                     /gene="LOC139904338"
                     /note="AWPM-19-like family; Region: AWPM-19; pfam05512"
                     /db_xref="CDD:398911"
ORIGIN      
        1 ttttggttgt ttcaagtgat caagagacta aaagaataaa attaaattca agatttggtg
       61 tcggaaatat taaagatttt ggtggataat catggcacaa acagtgggaa gaaacttggc
      121 agcaccattg ttgtttctta atttggtgat gtattttata actttagggt tttcagcttg
      181 gtgtcttaat aggtttatta atggccaaac taatcatcca agtttcggtg ggaatggtgc
      241 gacagagttc tttttggagt ttgcaatatt ggcttccgtt cttggaatag tgtcaaagtt
      301 cgccggaggt aatcatttaa gggcgtggag gaatgatagt cttgcggcgg ccggatcatc
      361 ttctctggtg gcttgggccg ttactgttct tgctttcggg ttggcatgta aggaaataaa
      421 tgtaggcggt cacagaggtt ggaggctaaa gatgatagaa gcatttatca taatcttgac
      481 gttcaccgag cttctatacg ttttgttggt gcacgccggg ctttacagca gccgatacgg
      541 gccgggttac cgtgacacag attacggtat gggaacacat ccggcggata ccggggttaa
      601 aggaacaacc ggtgtgggtg gtactagagt ctaa
//
LOCUS       XM_071886275            1054 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytidine deaminase 1-like
            (LOC139904340), mRNA.
ACCESSION   XM_071886275
VERSION     XM_071886275.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1054
                     /gene="LOC139904340"
                     /note="cytidine deaminase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 26
                     Proteins"
                     /db_xref="GeneID:139904340"
     CDS             33..947
                     /gene="LOC139904340"
                     /codon_start=1
                     /product="cytidine deaminase 1-like"
                     /protein_id="XP_071742376.1"
                     /db_xref="GeneID:139904340"
                     /translation="MSNKYVISASDAESLAKSKGLTVPQLLPSLVKSAQDLARPPISN
                     FHVGAVGLSSDGRIFLGGNIEFPGLPLNHSIHAEQFLITNLAAHSGGPKLLYIAVSAA
                     PCGHCRQFLQELRDVSNTQIVITDQPIENPVYRPISSILPDPFGPFDLLDQEMPLILE
                     KHDNKLCFDKDCNFITQNGNLSNLSNGYSELVKKNDGNLEGLALEAACESHAPYSGCP
                     SGVSLMDCHGNAYKGSYMESAAYNPSMMPVQAALVAYMVAGGIGYERIVAAVLVEKEG
                     GMVRQEDTARLMLKHISPKCELRVVHCV"
     misc_feature    42..941
                     /gene="LOC139904340"
                     /note="cytidine deaminase; Region: PLN02402"
                     /db_xref="CDD:178024"
ORIGIN      
        1 ataatttttt tattcattca ttgaaaacaa aaatgtcaaa caaatacgtg atctctgctt
       61 cagatgccga atcattagcc aaatcaaaag gtctcactgt ccctcaactc cttccatcac
      121 ttgttaaatc agcccaagat cttgctcgtc caccaatctc caacttccac gtgggcgccg
      181 tcggtttatc ctccgatgga cggatttttt tgggcggtaa tattgaattt cccggtttac
      241 ccctcaatca ttccattcat gctgaacagt ttctgatcac taacctcgca gcacacagcg
      301 gcggtccaaa acttctatat attgccgttt ctgccgcccc ttgcggccat tgccgtcaat
      361 ttctccaaga actccgggac gtctcaaata cccagatcgt aatcactgat caacccatag
      421 aaaaccctgt ttacagacct atttcatcga ttctaccaga cccatttggt ccctttgatc
      481 tgctggatca agaaatgcca ctaattcttg aaaaacatga caacaaattg tgtttcgata
      541 aagattgtaa ctttatcacc cagaatggaa atctatcgaa tctgtcaaat gggtattcgg
      601 aattggtgaa aaagaatgat gggaatttgg agggtttagc tttagaggcc gcgtgtgagt
      661 ctcacgcgcc gtacagtggg tgtccgtctg gggtgtcatt gatggattgt catgggaatg
      721 cgtataaggg atcttatatg gagtctgctg catataatcc gagtatgatg ccggtacagg
      781 cagcactggt ggcgtatatg gtagccggag gcattgggta tgagcggatt gtggcggcag
      841 ttctggtgga gaaggaagga gggatggtga ggcaagagga tactgctagg ttaatgttaa
      901 agcacatttc acctaaatgt gagctgagag ttgtccactg tgtgtaattt gattgattga
      961 tcaaacatta ttgattgtgg taattaatcg aagtgttgat taatatggaa ccctgcgtat
     1021 gtaagcgatt gcttatctat cgggcagatt aaaa
//
LOCUS       XM_071886276             764 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At4g29660-like (LOC139904341), transcript variant X1, mRNA.
ACCESSION   XM_071886276
VERSION     XM_071886276.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..764
                     /gene="LOC139904341"
                     /note="uncharacterized protein At4g29660-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904341"
     CDS             252..545
                     /gene="LOC139904341"
                     /codon_start=1
                     /product="uncharacterized protein At4g29660-like"
                     /protein_id="XP_071742377.1"
                     /db_xref="GeneID:139904341"
                     /translation="MATYLWRKYADYLHTKWEKEVLWTMVDPYKRPKSFTPLVTIYVC
                     AFYTGVIGAAITEQLYKERYWEDHPGEAVPIMRPKFYGGPWKIYKGTVLPPNK"
ORIGIN      
        1 aagtagtaag gggaaaaaaa aaaaaaaaac tgaacaaaag ttgagaaatt gacgatctcc
       61 aatctcctca aaccgccgat aagagtcgcc tgtttctttc agtctgtccg gcggggatga
      121 atctccagca aactatttgt ttcaatgttg tgtggccgta ttaagctgcg cagtatttct
      181 atatgtaaga tcgtatagca ttttaccttt gtagccactg caaatcaggt gaattttaaa
      241 caagtttggg aatggcaaca tatttgtgga gaaaatatgc tgattacttg catactaaat
      301 gggagaaaga agtactttgg accatggttg atccatataa gcgcccaaaa tcgtttactc
      361 ctcttgttac aatctatgta tgtgccttct atactggtgt cattggagca gcaatcaccg
      421 agcaactcta caaggaaaga tattgggagg atcaccctgg cgaggcggtg ccaataatga
      481 gacccaaatt ttatggcggt ccttggaaga tatacaaggg aactgtactt ccacccaaca
      541 agtgaaaatc agaaaataac gaaagctcat gtgatggaag agaaacatta tagattgtag
      601 gagttcctta catatacaat gatcttggca tgtctgagta tctatctaac ataatttgta
      661 cgaacaatca gtaactacat tgcgttattt cctttgtatt cttaaataat taacctacga
      721 tgcatgttta ctcctaaatg gttcttaaga atataatcat cata
//
LOCUS       XM_071886277             661 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At4g29660-like (LOC139904341), transcript variant X2, mRNA.
ACCESSION   XM_071886277
VERSION     XM_071886277.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..661
                     /gene="LOC139904341"
                     /note="uncharacterized protein At4g29660-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904341"
     CDS             149..442
                     /gene="LOC139904341"
                     /codon_start=1
                     /product="uncharacterized protein At4g29660-like"
                     /protein_id="XP_071742378.1"
                     /db_xref="GeneID:139904341"
                     /translation="MATYLWRKYADYLHTKWEKEVLWTMVDPYKRPKSFTPLVTIYVC
                     AFYTGVIGAAITEQLYKERYWEDHPGEAVPIMRPKFYGGPWKIYKGTVLPPNK"
ORIGIN      
        1 catataatat acaagtagta aggggaaaaa aaaaaaaaaa actgaacaaa agttgagaaa
       61 ttgacgatct ccaatctcct caaaccgccg ataagagtcg cctgtttctt tcagtctgtc
      121 cggcggtgaa ttttaaacaa gtttgggaat ggcaacatat ttgtggagaa aatatgctga
      181 ttacttgcat actaaatggg agaaagaagt actttggacc atggttgatc catataagcg
      241 cccaaaatcg tttactcctc ttgttacaat ctatgtatgt gccttctata ctggtgtcat
      301 tggagcagca atcaccgagc aactctacaa ggaaagatat tgggaggatc accctggcga
      361 ggcggtgcca ataatgagac ccaaatttta tggcggtcct tggaagatat acaagggaac
      421 tgtacttcca cccaacaagt gaaaatcaga aaataacgaa agctcatgtg atggaagaga
      481 aacattatag attgtaggag ttccttacat atacaatgat cttggcatgt ctgagtatct
      541 atctaacata atttgtacga acaatcagta actacattgc gttatttcct ttgtattctt
      601 aaataattaa cctacgatgc atgtttactc ctaaatggtt cttaagaata taatcatcat
      661 a
//
LOCUS       XM_071886278             749 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At4g29660-like (LOC139904341), transcript variant X3, mRNA.
ACCESSION   XM_071886278
VERSION     XM_071886278.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..749
                     /gene="LOC139904341"
                     /note="uncharacterized protein At4g29660-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904341"
     CDS             237..530
                     /gene="LOC139904341"
                     /codon_start=1
                     /product="uncharacterized protein At4g29660-like"
                     /protein_id="XP_071742379.1"
                     /db_xref="GeneID:139904341"
                     /translation="MATYLWRKYADYLHTKWEKEVLWTMVDPYKRPKSFTPLVTIYVC
                     AFYTGVIGAAITEQLYKERYWEDHPGEAVPIMRPKFYGGPWKIYKGTVLPPNK"
ORIGIN      
        1 ctcaaaccgc cgataagagt cgcctgtttc tttcagtctg tccggcgatg caccacagct
       61 ccattttttc aagttgtgat attcaaaagt ttggctatgg gatgaatctc cagcaaacta
      121 tttgtttcaa tgttgtgtgg ccgtattaag ctgcgcagta tttctatatg taagatcgta
      181 tagcatttta cctttgtagc cactgcaaat caggtgaatt ttaaacaagt ttgggaatgg
      241 caacatattt gtggagaaaa tatgctgatt acttgcatac taaatgggag aaagaagtac
      301 tttggaccat ggttgatcca tataagcgcc caaaatcgtt tactcctctt gttacaatct
      361 atgtatgtgc cttctatact ggtgtcattg gagcagcaat caccgagcaa ctctacaagg
      421 aaagatattg ggaggatcac cctggcgagg cggtgccaat aatgagaccc aaattttatg
      481 gcggtccttg gaagatatac aagggaactg tacttccacc caacaagtga aaatcagaaa
      541 ataacgaaag ctcatgtgat ggaagagaaa cattatagat tgtaggagtt ccttacatat
      601 acaatgatct tggcatgtct gagtatctat ctaacataat ttgtacgaac aatcagtaac
      661 tacattgcgt tatttccttt gtattcttaa ataattaacc tacgatgcat gtttactcct
      721 aaatggttct taagaatata atcatcata
//
LOCUS       XM_071886280             653 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At4g29660-like (LOC139904341), transcript variant X4, mRNA.
ACCESSION   XM_071886280
VERSION     XM_071886280.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..653
                     /gene="LOC139904341"
                     /note="uncharacterized protein At4g29660-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904341"
     CDS             141..434
                     /gene="LOC139904341"
                     /codon_start=1
                     /product="uncharacterized protein At4g29660-like"
                     /protein_id="XP_071742381.1"
                     /db_xref="GeneID:139904341"
                     /translation="MATYLWRKYADYLHTKWEKEVLWTMVDPYKRPKSFTPLVTIYVC
                     AFYTGVIGAAITEQLYKERYWEDHPGEAVPIMRPKFYGGPWKIYKGTVLPPNK"
ORIGIN      
        1 gggaaaaaaa aaaaaaaaac tgaacaaaag ttgagaaatt gacgatctcc aatctcctca
       61 aaccgccgat aagagtcgcc tgtttctttc agtctgtccg gcgccactgc aaatcaggtg
      121 aattttaaac aagtttggga atggcaacat atttgtggag aaaatatgct gattacttgc
      181 atactaaatg ggagaaagaa gtactttgga ccatggttga tccatataag cgcccaaaat
      241 cgtttactcc tcttgttaca atctatgtat gtgccttcta tactggtgtc attggagcag
      301 caatcaccga gcaactctac aaggaaagat attgggagga tcaccctggc gaggcggtgc
      361 caataatgag acccaaattt tatggcggtc cttggaagat atacaaggga actgtacttc
      421 cacccaacaa gtgaaaatca gaaaataacg aaagctcatg tgatggaaga gaaacattat
      481 agattgtagg agttccttac atatacaatg atcttggcat gtctgagtat ctatctaaca
      541 taatttgtac gaacaatcag taactacatt gcgttatttc ctttgtattc ttaaataatt
      601 aacctacgat gcatgtttac tcctaaatgg ttcttaagaa tataatcatc ata
//
LOCUS       XM_071886281             964 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thioredoxin-like 2,
            chloroplastic (LOC139904342), transcript variant X1, mRNA.
ACCESSION   XM_071886281
VERSION     XM_071886281.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..964
                     /gene="LOC139904342"
                     /note="thioredoxin-like 2, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139904342"
     CDS             111..800
                     /gene="LOC139904342"
                     /codon_start=1
                     /product="thioredoxin-like 2, chloroplastic isoform X1"
                     /protein_id="XP_071742382.1"
                     /db_xref="GeneID:139904342"
                     /translation="MAAVRLLSFNSSSLSTSLSSLQQNLLLTKNINNSKRALSIAADS
                     CLSSESNVNYRFGTNPRKQQSLQFKIQATITETEQPKWWEKSGGPNMIDIHSTQEFLT
                     ALSEAGDKLVIVEFYGTWCASCRALFPKLCKTAQEHPEIVFLKVNFDENKPMCKSLNV
                     KVLPYFHFYRGSDGQLESFSCSLAKFQKIKDAIQTHNTDRCSIGPNKGVGELNLDSLA
                     TQKNKQAEESA"
     misc_feature    402..692
                     /gene="LOC139904342"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; Region: TRX_family;
                     cd02947"
                     /db_xref="CDD:239245"
     misc_feature    order(471..473,480..482)
                     /gene="LOC139904342"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     polyA_site      964
                     /gene="LOC139904342"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cataaagttt gatactttca caaaggttcc gttacctttt ttatatatct atactacgta
       61 gtactatata tctatatcta tatctataat ttgtgtgcgg gggtgtgttc atggcggctg
      121 ttaggttgtt atccttcaat tcatcttcgc tatcaacatc actgagttca cttcaacaaa
      181 atctgttact aaccaaaaac atcaacaata gcaaaagggc gttgtcgatt gctgcggatt
      241 cttgtttatc ttcagagtca aacgtaaatt atcgatttgg aaccaacccc agaaagcagc
      301 aatcgctgca attcaagata caagcaacaa ttactgaaac tgaacagcca aaatggtggg
      361 agaaaagcgg aggaccaaat atgatagaca tccattcgac acaggagttt ttgacagctt
      421 tgagtgaggc tggagataaa ttagtaattg ttgaattcta cgggacatgg tgtgcttctt
      481 gtcgtgcttt attcccaaag ctatgcaaga cggcacaaga acaccccgaa attgtattct
      541 tgaaagttaa ctttgatgag aacaagccaa tgtgcaaaag cttgaacgtg aaggtccttc
      601 cttattttca tttttaccgg ggatctgatg gacaactcga atctttttca tgttctcttg
      661 ctaaatttca gaaaatcaag gatgctattc agacacacaa cacggatcgt tgcagcatcg
      721 gaccaaacaa aggtgttgga gaactaaacc ttgatagctt ggcgactcag aagaacaaac
      781 aggcggagga gtcggcataa aaattgtctt gattctatat atttgatttg ttacattaat
      841 atagttattt catggaaaga aatggtagtc aaaatctgta atttggtact tgatacatgt
      901 aattttcgta tatatatctt tttgtttcaa tacaagacca ttgagttgtg gtaacttagt
      961 aata
//
LOCUS       XM_071886282             790 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thioredoxin-like 2,
            chloroplastic (LOC139904342), transcript variant X2, mRNA.
ACCESSION   XM_071886282
VERSION     XM_071886282.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..790
                     /gene="LOC139904342"
                     /note="thioredoxin-like 2, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904342"
     CDS             123..626
                     /gene="LOC139904342"
                     /codon_start=1
                     /product="thioredoxin-like 2, chloroplastic isoform X2"
                     /protein_id="XP_071742383.1"
                     /db_xref="GeneID:139904342"
                     /translation="MTSDTFKIQATITETEQPKWWEKSGGPNMIDIHSTQEFLTALSE
                     AGDKLVIVEFYGTWCASCRALFPKLCKTAQEHPEIVFLKVNFDENKPMCKSLNVKVLP
                     YFHFYRGSDGQLESFSCSLAKFQKIKDAIQTHNTDRCSIGPNKGVGELNLDSLATQKN
                     KQAEESA"
     misc_feature    228..518
                     /gene="LOC139904342"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; Region: TRX_family;
                     cd02947"
                     /db_xref="CDD:239245"
     misc_feature    order(297..299,306..308)
                     /gene="LOC139904342"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     polyA_site      790
                     /gene="LOC139904342"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatgatgatg atgatatttg aaggtcttca ctttgtttaa tgttttacca tttcttaact
       61 tccaaccgcc tcacaagttt gtggtataaa cacaattcta attgttatat aatggcatta
      121 caatgacatc cgatactttc aagatacaag caacaattac tgaaactgaa cagccaaaat
      181 ggtgggagaa aagcggagga ccaaatatga tagacatcca ttcgacacag gagtttttga
      241 cagctttgag tgaggctgga gataaattag taattgttga attctacggg acatggtgtg
      301 cttcttgtcg tgctttattc ccaaagctat gcaagacggc acaagaacac cccgaaattg
      361 tattcttgaa agttaacttt gatgagaaca agccaatgtg caaaagcttg aacgtgaagg
      421 tccttcctta ttttcatttt taccggggat ctgatggaca actcgaatct ttttcatgtt
      481 ctcttgctaa atttcagaaa atcaaggatg ctattcagac acacaacacg gatcgttgca
      541 gcatcggacc aaacaaaggt gttggagaac taaaccttga tagcttggcg actcagaaga
      601 acaaacaggc ggaggagtcg gcataaaaat tgtcttgatt ctatatattt gatttgttac
      661 attaatatag ttatttcatg gaaagaaatg gtagtcaaaa tctgtaattt ggtacttgat
      721 acatgtaatt ttcgtatata tatctttttg tttcaataca agaccattga gttgtggtaa
      781 cttagtaata
//
LOCUS       XR_011778739             912 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904343), transcript variant X1, ncRNA.
ACCESSION   XR_011778739
VERSION     XR_011778739.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..912
                     /gene="LOC139904343"
                     /note="uncharacterized LOC139904343; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904343"
     ncRNA           1..912
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904343"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904343"
ORIGIN      
        1 cttttctgat gagagtgcac aaagtgtttg ttgaaatgcc tgcaagaaaa aaactaataa
       61 ttgcaattta ctttaacact tttagtttat aattatagtt atctttgatt aatggtgtgt
      121 tttagtgttg ctattatatt ccatgtcaat cttgacccat ttgtttagat tgtataaaga
      181 cttaacaatg taactgttgg gccaaaaaag ttacagaaga atagctaatc aagtactcaa
      241 ttagtgtaac aacttttgaa gaggctcaaa gattggagca tggttttaga gatattttaa
      301 atcaatacag tgatggtgaa attcctgttg atgagatggt taataaacgg atgggaaata
      361 ctgttaaaga tgaacttagt atgcttcctc aaatatattc tctcgagttc gagcaccaat
      421 tgagttctgt atttgttggc atagtgtctg cccagaaacg ttatggtacc cgaagcaccg
      481 ctgcattggc tgtaaaagca agtcgtgaag tgttcttcta tgaaaggcat ctggaaaatg
      541 gcttgtggaa agagctgaca gaaacataca tgatacaaat aaatgagatt acagggaaaa
      601 gttaagaata tgaaaagttt ggaggatgtt caacatttgt taatttggtg attaaaggtt
      661 gacaaaatga aaacactttg agagaattac caattgagcg gatcaagtct tggtagaatg
      721 ggtaattggt catatgttct ttcctttgtg ggtatgtgtt cgttttggta gctttttact
      781 cttcatttgt tagtttctgt agtgtggagg tctttaatct gggttatgga gattagtctt
      841 tttatttgtt cttggtgacc tatttctctt ttatacattt cttaaagaaa gttatatgta
      901 taatgataaa ta
//
LOCUS       XR_011778740             905 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904343), transcript variant X2, ncRNA.
ACCESSION   XR_011778740
VERSION     XR_011778740.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..905
                     /gene="LOC139904343"
                     /note="uncharacterized LOC139904343; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904343"
     ncRNA           1..905
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904343"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904343"
ORIGIN      
        1 cttgcttgct tctagggttt ctcacatatt agttccattt tcctccaaag ccatctacct
       61 tcatcatatt ttcatctatt cacctgctcc atcaactttc atcatcttca atcgtcgtca
      121 tcatcatcca aatcgcagca acgatttctt cagcgccatt gattgtataa agacttaaca
      181 atgtaactgt tgggccaaaa aagttacaga agaatagcta atcaagtact caattagtgt
      241 aacaactttt gaagaggctc aaagattgga gcatggtttt agagatattt taaatcaata
      301 cagtgatggt gaaattcctg ttgatgagat ggttaataaa cggatgggaa atactgttaa
      361 agatgaactt agtatgcttc ctcaaatata ttctctcgag ttcgagcacc aattgagttc
      421 tgtatttgtt ggcatagtgt ctgcccagaa acgttatggt acccgaagca ccgctgcatt
      481 ggctgtaaaa gcaagtcgtg aagtgttctt ctatgaaagg catctggaaa atggcttgtg
      541 gaaagagctg acagaaacat acatgataca aataaatgag attacaggga aaagttaaga
      601 atatgaaaag tttggaggat gttcaacatt tgttaatttg gtgattaaag gttgacaaaa
      661 tgaaaacact ttgagagaat taccaattga gcggatcaag tcttggtaga atgggtaatt
      721 ggtcatatgt tctttccttt gtgggtatgt gttcgttttg gtagcttttt actcttcatt
      781 tgttagtttc tgtagtgtgg aggtctttaa tctgggttat ggagattagt ctttttattt
      841 gttcttggtg acctatttct cttttataca tttcttaaag aaagttatat gtataatgat
      901 aaata
//
LOCUS       XR_011778741             651 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904343), transcript variant X3, ncRNA.
ACCESSION   XR_011778741
VERSION     XR_011778741.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139904343"
                     /note="uncharacterized LOC139904343; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904343"
     ncRNA           1..651
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904343"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904343"
ORIGIN      
        1 cttgcttgct tctagggttt ctcacatatt agttccattt tcctccaaag ccatctacct
       61 tcatcatatt ttcatctatt cacctgctcc atcaactttc atcatcttca atcgtcgtca
      121 tcatcatcca aatcgcagca acgatttctt cagcgccatt gattgggaga ttttcatgga
      181 aaatcccata tatgaaacgt tatggtaccc gaagcaccgc tgcattggct gtaaaagcaa
      241 gtcgtgaagt gttcttctat gaaaggcatc tggaaaatgg cttgtggaaa gagctgacag
      301 aaacatacat gatacaaata aatgagatta cagggaaaag ttaagaatat gaaaagtttg
      361 gaggatgttc aacatttgtt aatttggtga ttaaaggttg acaaaatgaa aacactttga
      421 gagaattacc aattgagcgg atcaagtctt ggtagaatgg gtaattggtc atatgttctt
      481 tcctttgtgg gtatgtgttc gttttggtag ctttttactc ttcatttgtt agtttctgta
      541 gtgtggaggt ctttaatctg ggttatggag attagtcttt ttatttgttc ttggtgacct
      601 atttctcttt tatacatttc ttaaagaaag ttatatgtat aatgataaat a
//
LOCUS       XR_011778742             907 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904343), transcript variant X4, ncRNA.
ACCESSION   XR_011778742
VERSION     XR_011778742.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..907
                     /gene="LOC139904343"
                     /note="uncharacterized LOC139904343; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904343"
     ncRNA           1..907
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904343"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904343"
ORIGIN      
        1 cttttctgat gagagtgcac aaagtgtttg ttgaaatgcc tgcaagaaaa aaactaataa
       61 ttgcaattta ctttaacact tttagtttat aattatagtt atctttgatt aatggtgtgt
      121 tttagtgttg ctattatatt ccatgtcaat cttgacccat ttgtttagat tgtataaaga
      181 cttaacaatg taactgttgg gccaaaaaag ttacagaaga atagctaatc aagtactcaa
      241 ttagtgtaac aacttttgaa gaggctcaaa gattggagca tggttttaga gatattttaa
      301 atcaatacag tgatggtgaa attcctgttg atgagatggt taataaacgg atgggaaata
      361 ctgttaaaga tgaacttagt atgcttcctc aaatatattc tctcgagttc gagcaccaat
      421 tgagttctgt atttgttggc atagtgtctg cccagaaacg ttatggtacc cgaagcaccg
      481 ctgcattggc tgtaaaagca agtcgtgaag tgttcttcta tgaaaggcat ctggaaaatg
      541 gcttgtggaa agagctgaca gaaacataca tgatacaaat aaatgagatg gaaaagttaa
      601 gaatatgaaa agtttggagg atgttcaaca tttgttaatt tggtgattaa aggttgacaa
      661 aatgaaaaca ctttgagaga attaccaatt gagcggatca agtcttggta gaatgggtaa
      721 ttggtcatat gttctttcct ttgtgggtat gtgttcgttt tggtagcttt ttactcttca
      781 tttgttagtt tctgtagtgt ggaggtcttt aatctgggtt atggagatta gtctttttat
      841 ttgttcttgg tgacctattt ctcttttata catttcttaa agaaagttat atgtataatg
      901 ataaata
//
LOCUS       XM_071886283            1423 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904344), mRNA.
ACCESSION   XM_071886283
VERSION     XM_071886283.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1423
                     /gene="LOC139904344"
                     /note="uncharacterized LOC139904344; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904344"
     CDS             58..1116
                     /gene="LOC139904344"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742384.1"
                     /db_xref="GeneID:139904344"
                     /translation="MTPIFFDSSSQTYSPYPISDLHHEDHLSNHQFLSPNSQSSSSNS
                     LTTQLFLNSNVHDHNGIFDTQLLQSPQNQLEGGINFASQSYTDQSMNNDQRIGNNGEK
                     GVEYSTWNKSDVNNMANNDQTPMKWMSSKMRVMLKMKKSDPVNLRFYTSSTREPTKVE
                     DHKPPMEETDNSTNYYSTSSNNNILPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIR
                     QRKARRAAAAAAAAAAENGNGSISVPIITQIKVTKTQHKDHKKISNGHITKYKKRQYN
                     TTQHITITTPSSSPSPSPSPSPLPSPSSSSSVRKNCVEEFLVSLSKNLTCYRVFPQDE
                     KEAAILLMALSCGYAHET"
     misc_feature    613..>720
                     /gene="LOC139904344"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; Region: ZnF_GATA; smart00401"
                     /db_xref="CDD:214648"
     polyA_site      1423
                     /gene="LOC139904344"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtagctagg cacatatcct ctttaaaaaa atttgatcat attaatttac aaagtaaatg
       61 actccaatct tctttgattc atcttctcaa acttattcac cgtacccaat tagtgatctt
      121 catcatgaag atcaccttag taaccaccaa ttcttgagcc ccaactctca atcttcatct
      181 tccaattcac tcacaactca acttttcttg aactccaacg ttcatgatca caatgggatt
      241 tttgatacac aattattgca gtctcctcaa aaccaacttg aaggtgggat taattttgca
      301 tcacaatcgt acaccgatca aagtatgaac aatgatcaaa gaattggtaa caacggtgag
      361 aaaggcgttg aatattctac ttggaacaag agtgatgtta ataatatggc caataatgat
      421 caaactccaa tgaagtggat gtcttccaaa atgagagtaa tgcttaaaat gaagaaatct
      481 gatccggtga accttagatt ttatacttca tctactagag aaccaacaaa agttgaagat
      541 cataaaccac caatggaaga aaccgataat tcaaccaatt attatagtac atcttcaaac
      601 aacaatattc taccgattag ggtttgttcc gactgtaaca ctactaagac tcctctatgg
      661 cgaagtggac ctcgaggtcc taagtcactt tgcaatgctt gtggaattcg acaaagaaag
      721 gcgagacggg ctgcagctgc tgcagctgca gccgctgcag aaaatggaaa tggcagcatt
      781 tcagtaccca tcatcacaca aataaaggtt acaaaaaccc aacacaaaga tcacaaaaaa
      841 ataagtaatg ggcatattac aaaatacaag aaaaggcaat acaatactac tcaacacatc
      901 accataacaa ctccatcctc atcaccgtcc ccttcaccat caccgtcacc attaccatca
      961 ccatcgtcat catcttcagt gaggaagaat tgtgtggagg aatttctagt aagtctaagc
     1021 aagaacttga catgttaccg tgtgtttcct caagatgaaa aagaagctgc aatactacta
     1081 atggcacttt cttgtggcta tgctcatgag acttaaaagt tatactcatt ttgttttaat
     1141 aatttcaatt ttcatgtgag tgatagtgat cttataatta agttatgttt gagaaggaat
     1201 taattacctt cacttttttc tatttcgtta gctaacagtg agtgatgatg agtgcagtga
     1261 gttactatat gttttgttat aagaatatgt atgatatgat atatgatata tgatatgatg
     1321 aacatgttga taaccaacag tagtcatgga tcacatgttc ttcatctaag gttattattt
     1381 ttgtactact ccaataatca agaattactt attttttggt tca
//
LOCUS       XM_071886284            1774 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904345), mRNA.
ACCESSION   XM_071886284
VERSION     XM_071886284.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1774
                     /gene="LOC139904345"
                     /note="uncharacterized LOC139904345; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904345"
     CDS             236..1165
                     /gene="LOC139904345"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742385.1"
                     /db_xref="GeneID:139904345"
                     /translation="MPPGKKRPRKANEQTPEAESSGEPSIFHSRHEAEDEIPENRHPN
                     LQFARSLLCYPTYMKNLAILMKKEVEAPKIIDWEPLRIVFLEEPIRDMLRQSYVCPSI
                     QPKYVYNDWVHLFELDKPIYMEWCMEFFSTVEMNCNPKDSDDDSFLRFCLGGQDQSMS
                     MFALAKALGIYSPEELVVPYFRTYLQHGKRISTDFDKNTAWVNLSRIRKFKAGIFSYL
                     KIGSRYLRIIQRFISHTITQRGTNTEKVSIPDLFLLMCFRDKLNVNIPYCMAKYLCTT
                     AGGLRSESPMCGGVFITLIGQHLRVNLHTGRVI"
ORIGIN      
        1 agccttgcaa tcgcgtagag tgaaaagtat gttgggctat tttggacctc gctggcattt
       61 cgttaccccc ggaaaaaaat taaatagata aataaattaa atagggttta aacccctgtt
      121 acgtttcaac tatcaatttt tttttattct ttctttcgct tacacacatc tgccatttac
      181 aagagattca agtttcgtat aattttgttt tcaagctaat cttctttaat tcaacatgcc
      241 tcctggaaaa aagagaccga ggaaggcaaa cgagcaaact ccggaagctg aatcgtctgg
      301 tgaaccatct atttttcact cacgtcatga agctgaggat gaaattcccg aaaatcgtca
      361 cccaaacttg caatttgcaa gatctttact ttgctacccg acttacatga agaatttggc
      421 tattttaatg aagaaagagg ttgaagcacc aaaaattata gattgggagc cattacgaat
      481 tgtgtttctt gaggagccga taagagatat gttacgccaa tcatatgtgt gcccaagtat
      541 ccagcccaaa tatgtttata atgattgggt ccacctattc gagctcgata aacctatcta
      601 tatggagtgg tgtatggaat tcttttccac tgttgagatg aactgtaatc cgaaagatag
      661 tgatgatgac tcgtttttaa gattttgtct aggtgggcag gatcagtcta tgtccatgtt
      721 tgcacttgct aaggcgttag gtatttattc tccggaagag ttagttgtgc cttattttcg
      781 aacttaccta caacatggaa agcggatatc tactgacttt gacaaaaata cagcttgggt
      841 taatttgtca cgcattcgga agtttaaggc tggtattttt tcgtatttga agattggttc
      901 gagatatctt aggattattc agaggttcat ttcccacacc atcactcaac ggggtacaaa
      961 tacagaaaaa gtgtccattc ccgatctatt tttactcatg tgtttcagag ataagctgaa
     1021 tgtgaatatt ccctattgta tggccaaata tttgtgtact actgctggag gtttgaggag
     1081 tgagagtcct atgtgtgggg gtgttttcat caccctgatt ggtcagcatt taagggttaa
     1141 cttgcatact ggtcgtgtga tttgaaagag taaggtgaaa gctggaacta ttactgatca
     1201 aatgtacgag tctgcaaaag tacttacacg aagaaagaag aagattctgg catatgaagg
     1261 aatgcattca caaagtgaag aaggacttga tgttgatttt gaagaggaga atactcttgc
     1321 tcctgagccg gttaaccagg gtttgggtga gggcgcgttg cagggtttgt gtaagaagat
     1381 tgatgagcac tatgaggatt tgtatgatag gattgatgag cactatatgg gtttgtctaa
     1441 ccagattaag gaaatgtcta ctgaaatcgc cactcttcgt gcatctcagg aacaacacaa
     1501 gaagaattgc ccgtcatcat cctctcaaca gcctactccg agatcatatg gaggatttga
     1561 atctttcatc gattcatttt cttccgagtg attctagctt gctgtgctct atgccgttgt
     1621 tgtttttatt tctttgttca gactttttgt tttgttggtt ttgtattttg ggatatttct
     1681 tttaagacta tgtacttgaa tacttatggg gcgttttggt accacggtgg taccacccca
     1741 tcctttgcat gtgtggtttg atattgcagg ttat
//
LOCUS       XM_071886285            2009 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable polyamine oxidase 5
            (LOC139904346), mRNA.
ACCESSION   XM_071886285
VERSION     XM_071886285.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2009
                     /gene="LOC139904346"
                     /note="probable polyamine oxidase 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139904346"
     CDS             178..1806
                     /gene="LOC139904346"
                     /codon_start=1
                     /product="probable polyamine oxidase 5"
                     /protein_id="XP_071742386.1"
                     /db_xref="GeneID:139904346"
                     /translation="MVLKKPRIVIIGAGMAGLTAANKLYKSGVKKGAFEVCVVEGGNR
                     IGGRIITSEFAGDRIEMGATWIHGIEGSPIHKIAQEINSLESEQPWECMDGFSDGYVL
                     NPITIAENGYVINPSLVDPISNLFNNLMDFAQGKRKSILGGGIEADSYDRNWKENENV
                     GSFLRKGLEFYWKMESSRNKREEISGCGEWNRKLLEESIFAMYENTQRTFTAANNLHN
                     LDYLAESQYVMFPGEEITIAKGYSSIIESLASVLPHGVIQLGKKVNSIEWQPECVMGL
                     RGKKHGGSSRPIKIHFLDGTSMTADHVIVTVSLGVLKAGIFNNNNDLGMFKFNPPLPN
                     YKIEAISRLGYGVVNKLFLKLSPDFDLERFPFLQMLFHKSDHQMTNPKIPWWIRKTNS
                     LSPIYETSKVLLSWFAGEEALELETLRDEVILNEASTTISSFLQNEKHNEVIKSSVKF
                     DKILKTRWGSDPLFMGSYSYIAVGSSIADIDSLAEPLPNTMVFESTSGSPPLQILFAG
                     EATHRTHYSTTHGAYFSGLREANRLLQHYHCIDV"
     misc_feature    178..1794
                     /gene="LOC139904346"
                     /note="polyamine oxidase; Region: PLN02568"
                     /db_xref="CDD:215308"
ORIGIN      
        1 ttatatatgc tttcttcttt agttaaaaac tactccaacc ttatcagtca gccaccattc
       61 cctctcactc acttgattct ttgtacgttg aaagcatcct aagctcaaac ccacaatatt
      121 ttctgcaaaa agattctgtc tttcttaaga acccacaagt atttttagca aataaaaatg
      181 gttttaaaga aaccaagaat agtaataatt ggagctggaa tggcagggtt gacagctgca
      241 aataagctgt acaaatctgg tgttaaaaaa ggtgcttttg aggtttgtgt tgttgaaggt
      301 ggaaacagaa ttggaggtag gattattacc tcagaatttg caggtgacag aattgagatg
      361 ggagctactt ggatccatgg aattgaaggt agcccaattc acaagattgc tcaagaaatc
      421 aattctttgg aatcagaaca accatgggag tgcatggatg ggtttagtga tgggtatgtt
      481 ttaaacccaa tcaccattgc tgaaaacgga tatgttataa atccatctct tgttgaccca
      541 atttcaaatc tttttaacaa tttaatggat tttgctcaag gtaaaaggaa atcaatactg
      601 ggtggtggga ttgaagctga tagttatgat aggaattgga aagaaaatga aaatgttggg
      661 tcttttctta gaaaaggtct tgaattttat tggaagatgg aatccagcag aaataaaaga
      721 gaggagatta gtgggtgtgg ggaatggaat aggaaattat tagaagaatc aatctttgca
      781 atgtatgaaa acactcaaag gacttttaca gctgcaaata atttgcataa tcttgattac
      841 ttagcagaga gtcagtatgt tatgtttcct ggtgaagaga tcaccattgc taaaggttat
      901 tcaagcatta tagaatcatt agcatctgtt ttaccacatg gggttattca attaggcaag
      961 aaagtgaata gtattgagtg gcagcctgaa tgtgtgatgg gattaagggg aaaaaagcat
     1021 ggtggtagtt caagaccaat aaagattcac tttcttgatg gtactagcat gacagcagat
     1081 catgttattg ttacagtttc attaggagtt cttaaagcag gaatctttaa caacaacaac
     1141 gatttgggta tgtttaaatt caatcctcca cttcctaatt acaagattga agcaatttca
     1201 agacttgggt acggtgtggt taacaagctt ttcttgaaat taagtcctga ttttgatctt
     1261 gaacgatttc cgttcctaca gatgttgttc cataaatcgg atcatcaaat gacgaaccca
     1321 aagataccat ggtggattag aaagacaaat tctttgtcac caatttatga aacatcaaag
     1381 gtgttattgt cctggtttgc aggcgaagaa gcacttgagt tggaaacact tcgggatgaa
     1441 gtgattctca atgaggcttc tacgactatt tctagttttt tgcagaatga gaaacataat
     1501 gaagtgatca aaagttcagt gaaatttgat aagattttaa aaactagatg gggtagtgat
     1561 cccctgttta tgggatcata cagttatata gcagtcggat caagtatcgc agacatcgat
     1621 tcactggctg agccgttacc aaacacaatg gttttcgagt caacaagtgg ctcaccgccg
     1681 cttcagattc ttttcgcagg tgaagcgaca catagaactc attactctac aactcatggt
     1741 gcttatttca gtggtcttag agaagcaaat aggcttcttc aacattatca ttgtattgat
     1801 gtatgatcag aggtatgctt gtttggatta ttagatcatt agtcttttga ttatctattt
     1861 tttttaacca cccttttctc taatgattcg tcatactcga aatttggaaa aatgaaaggg
     1921 agaggtggga acattttcaa gaagcttttt taaattttct attgctattt gataagctcc
     1981 ctagttatat tatccttttc tttttaatg
//
LOCUS       XM_071886286             982 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides translation
            machinery-associated protein 22-like (LOC139904348), transcript
            variant X1, mRNA.
ACCESSION   XM_071886286
VERSION     XM_071886286.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..982
                     /gene="LOC139904348"
                     /note="translation machinery-associated protein 22-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139904348"
     CDS             190..774
                     /gene="LOC139904348"
                     /codon_start=1
                     /product="translation machinery-associated protein 22-like
                     isoform X1"
                     /protein_id="XP_071742387.1"
                     /db_xref="GeneID:139904348"
                     /translation="MAEKPQPVQVLYCGVCGLPAEYCEFGPDFEKCKPWLVQFAPHVY
                     PHLLQDANGKDVETVSIQLQSSSISDGNSASVAGTSAPKQDPVKRLPGGKVKKKEKQE
                     VIIEKVTRNKRKSITTLKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQG
                     DIAYDIVEFITHTWPEVPETAIFFIEDGKKVPAV"
     misc_feature    208..744
                     /gene="LOC139904348"
                     /note="Eukaryotic initiation factor 1 and related
                     proteins; Region: eIF1_SUI1_like; cl00229"
                     /db_xref="CDD:469673"
     misc_feature    order(517..519,526..531,535..537,589..591,598..606,
                     610..618,622..624,664..666,673..675)
                     /gene="LOC139904348"
                     /note="putative rRNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:211320"
     polyA_site      982
                     /gene="LOC139904348"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caaaattcga gaaataaata aatctggcaa ctgcaatatg agtttttaac ctgtcttctc
       61 catttttatt aattattaat tcgctctttt tccactgtat cgtaaaaaaa accctagttt
      121 ttgttgaata aactacggag taataaatac ccaaaaatca ccaatcaaat cgattaacaa
      181 caattgataa tggctgaaaa acctcaaccg gttcaagtat tatactgtgg tgtttgcggg
      241 ttacctgccg agtactgtga attcggaccc gattttgaaa agtgcaaacc atggttggtc
      301 caatttgcac cccacgttta tcctcatctt cttcaagatg caaatgggaa ggacgtagaa
      361 acagtttcga ttcaacttca atcgtcatca atttcggatg gcaattctgc ttctgttgca
      421 ggcacttcag ctccaaagca ggacccagta aagagacttc cagggggaaa ggttaaaaag
      481 aaggagaaac aagaagttat aatcgagaag gtaacccgca acaagcgaaa gtccatcacc
      541 actttgaaag gccttgatct ttttggtgtt aaactgagtg atgcttcaaa gaagcttgga
      601 aagaagtttg ctacgggagc ttctgttgtt aaggggccaa ccgagaaaga tcaaattgat
      661 gtacaaggcg acatagcgta tgacatcgtg gagtttatca cacatacatg gcctgaggtt
      721 cctgagacag caattttctt tattgaagat gggaaaaagg ttccagcggt ttaagttttg
      781 aagatttgta ttatgtggca ttttcattgg acgactgttg gatatctaaa acaccgactg
      841 tgttcacgat agatagagct gttttctttt tctcataatc caactgctat acccctttga
      901 gcgatttcct caacttgaaa tcatcctatg atatatgaaa aactccgtat gattttcaat
      961 tgagttgtgg tttgcgacaa tc
//
LOCUS       XM_071886287             976 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides translation
            machinery-associated protein 22-like (LOC139904348), transcript
            variant X2, mRNA.
ACCESSION   XM_071886287
VERSION     XM_071886287.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..976
                     /gene="LOC139904348"
                     /note="translation machinery-associated protein 22-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins"
                     /db_xref="GeneID:139904348"
     CDS             190..768
                     /gene="LOC139904348"
                     /codon_start=1
                     /product="translation machinery-associated protein 22-like
                     isoform X2"
                     /protein_id="XP_071742388.1"
                     /db_xref="GeneID:139904348"
                     /translation="MAEKPQPVQVLYCGVCGLPAEYCEFGPDFEKCKPWLVQFAPHVY
                     PHLLQDANGKDVETVSIQLQSSSISDGNSASGTSAPKQDPVKRLPGGKVKKKEKQEVI
                     IEKVTRNKRKSITTLKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDI
                     AYDIVEFITHTWPEVPETAIFFIEDGKKVPAV"
     misc_feature    208..738
                     /gene="LOC139904348"
                     /note="Eukaryotic initiation factor 1 and related
                     proteins; Region: eIF1_SUI1_like; cl00229"
                     /db_xref="CDD:469673"
     misc_feature    order(511..513,520..525,529..531,583..585,592..600,
                     604..612,616..618,658..660,667..669)
                     /gene="LOC139904348"
                     /note="putative rRNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:211320"
     polyA_site      976
                     /gene="LOC139904348"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caaaattcga gaaataaata aatctggcaa ctgcaatatg agtttttaac ctgtcttctc
       61 catttttatt aattattaat tcgctctttt tccactgtat cgtaaaaaaa accctagttt
      121 ttgttgaata aactacggag taataaatac ccaaaaatca ccaatcaaat cgattaacaa
      181 caattgataa tggctgaaaa acctcaaccg gttcaagtat tatactgtgg tgtttgcggg
      241 ttacctgccg agtactgtga attcggaccc gattttgaaa agtgcaaacc atggttggtc
      301 caatttgcac cccacgttta tcctcatctt cttcaagatg caaatgggaa ggacgtagaa
      361 acagtttcga ttcaacttca atcgtcatca atttcggatg gcaattctgc ttctggcact
      421 tcagctccaa agcaggaccc agtaaagaga cttccagggg gaaaggttaa aaagaaggag
      481 aaacaagaag ttataatcga gaaggtaacc cgcaacaagc gaaagtccat caccactttg
      541 aaaggccttg atctttttgg tgttaaactg agtgatgctt caaagaagct tggaaagaag
      601 tttgctacgg gagcttctgt tgttaagggg ccaaccgaga aagatcaaat tgatgtacaa
      661 ggcgacatag cgtatgacat cgtggagttt atcacacata catggcctga ggttcctgag
      721 acagcaattt tctttattga agatgggaaa aaggttccag cggtttaagt tttgaagatt
      781 tgtattatgt ggcattttca ttggacgact gttggatatc taaaacaccg actgtgttca
      841 cgatagatag agctgttttc tttttctcat aatccaactg ctatacccct ttgagcgatt
      901 tcctcaactt gaaatcatcc tatgatatat gaaaaactcc gtatgatttt caattgagtt
      961 gtggtttgcg acaatc
//
LOCUS       XM_071886288            1566 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytokinin dehydrogenase
            2-like (LOC139904349), mRNA.
ACCESSION   XM_071886288
VERSION     XM_071886288.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1566
                     /gene="LOC139904349"
                     /note="cytokinin dehydrogenase 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139904349"
     CDS             8..1558
                     /gene="LOC139904349"
                     /codon_start=1
                     /product="cytokinin dehydrogenase 2-like"
                     /protein_id="XP_071742389.1"
                     /db_xref="GeneID:139904349"
                     /translation="MAYNFLLFFLVFIITPVSSGRPLLNTSLPSLPFQFPETNNLCKD
                     TYCIKTASTDYGRLVQEIPFGVLQPSSVSDIVKLVKSSYDSPIPFTIATRGNGHSVRG
                     QAMAKDGVVIDMAALRTVNVINGIRVNGNSSSGFYADVGGEQLWIDVLQTSLLHGLAP
                     VSWTDYLYLTVGGTLSNAGISGQTSFHGPQISNVLEMDVITGKGELVTCSKDINPDLF
                     YAVLGGLGQFGIITRARIVLNKAPTRVKWFQIIYEDFSKFTKDQEHLISINGFDYVEG
                     SLITKQSPAGNFFSPADASMINSLASNKGILYSLEAVKYYDDQSLNTIDEVLQTIFNE
                     LSFNSGFVFSKDAPIVDFLNRVRGEEVYLESLGLWDVPHPWLVLLVPKSRIMDFNQAV
                     LVNIIQKQSLSAGPFIVYPFNRNKWDERMSVVIPEDEEDMFYVVNLLNSAGGTVDPAV
                     IDKQNDDILQYCQQNGINVKEYLPHYTKKEEWIKHFGKKWNVFKQRKYQFDPKMILSP
                     GHRIFNFE"
     misc_feature    8..1549
                     /gene="LOC139904349"
                     /note="cytokinin dehydrogenase; Region: PLN02441"
                     /db_xref="CDD:215242"
ORIGIN      
        1 cgctctaatg gcatataact ttcttctatt tttcttagtt ttcataatta caccagtttc
       61 atcaggaaga ccgttactaa acacttcatt accatcactt ccatttcaat tcccagaaac
      121 taataatcta tgtaaagata cctattgcat caaaacagcc tctaccgatt acggtagact
      181 cgttcaagag atccctttcg gtgttcttca accatcgtcg gtttcggata ttgtcaaact
      241 tgtaaaatca tcttacgact ctcctattcc gttcactatt gccacccgtg gaaatggcca
      301 ttcggttagg ggacaagcta tggctaaaga tggagtggtg atcgatatgg cagctttaag
      361 gactgtcaat gtaataaatg gaattagggt taatgggaac tcttcttcag ggttttatgc
      421 agatgttggg ggtgagcaac tatggatcga tgtgttgcaa acctcacttc tgcatggact
      481 tgcacccgta tcgtggacag attacttgta ccttaccgtt ggtggtacac tcagtaatgc
      541 tggaattagt ggacaaacat cttttcatgg tcctcagatt agcaatgttc ttgaaatgga
      601 tgtcattact ggaaaaggag aattggtgac ttgttccaag gacattaacc ctgatctgtt
      661 ttatgctgtt cttggaggtc ttggacagtt tgggatcata actagggcaa gaattgttct
      721 aaataaagca ccaactagag tgaaatggtt tcaaataatt tatgaagatt tttccaaatt
      781 tacgaaggac caagagcatt tgatctcaat taatgggttt gattatgtgg aaggctcttt
      841 gataacaaaa caaagtccag caggcaactt tttctcacca gctgatgcat ccatgataaa
      901 ttcattagca tctaacaaag gaattttata cagcttagaa gcagtcaaat actacgatga
      961 tcaaagccta aacaccattg atgaggtgct tcaaacgata tttaatgagt tgagtttcaa
     1021 ctctggattc gttttcagta aagatgcacc gatagttgat tttttgaatc gagtaagagg
     1081 tgaggaagta tatctagaat cgttaggatt atgggatgtt cctcatccat ggttagttct
     1141 ccttgtgcca aaatctcgaa ttatggattt caatcaagct gttcttgtca acattatcca
     1201 aaaacaaagt ttgagtgcag gaccattcat tgtctaccca ttcaaccgaa acaaatggga
     1261 tgaacgaatg tcggtagtta taccagagga tgaagaagat atgttttacg tggtgaactt
     1321 attaaactca gctggtggca ctgttgatcc tgcagtaatt gacaagcaaa acgacgatat
     1381 tttacaatat tgtcaacaaa atgggatcaa tgtcaaggaa tatctaccac attacacaaa
     1441 aaaagaagaa tggattaagc attttggcaa gaaatggaac gtctttaaac agaggaaata
     1501 tcagtttgat ccaaaaatga tactgtctcc tggacataga atttttaatt tcgagtaaac
     1561 tttttt
//
LOCUS       XM_071886289            2708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904350), mRNA.
ACCESSION   XM_071886289
VERSION     XM_071886289.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2708
                     /gene="LOC139904350"
                     /note="uncharacterized LOC139904350; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904350"
     CDS             395..2431
                     /gene="LOC139904350"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742390.1"
                     /db_xref="GeneID:139904350"
                     /translation="MDPHSFIARAEAQRWIGIAEKLLISHDLVGSKTFAIRARESDPR
                     LEAADQILAIADTLLAAEKRLVGSNGNQQPDYYAILQLVQFVQDSDHITSQYRRLAVI
                     LNPHHNRFPYSDQAFQLINDAWAVLSNPMRKSMYDSQLDFGHQQQQHINNLGFNIQQH
                     QHQHHSPNQHHHHQQQQQQQQQHNFFSINQELAEPQQTFQTRLQPSHQQHNFLSQPNV
                     AVREPQEQMFHHQDQQEQLFQPQVQPFQVTSTPHQQTRPPSQPAQSQPPLGIQSPSGP
                     TVAATQSPFSWPQAPPVSQSQQQTLHFQQQEQQNQTQQQQQQEQQRQQHQDPIQQNAA
                     PVELPSQVNSNVNGVNEEETEAETEAEPEEVGEDVDDDSPTFWTTCPFCFYMYEYPSV
                     YADCTLRCDNCNRAFQAVRISSPPAIVEGQEAYFYSWGFYPIGVSMSHLQSKNKKVAT
                     PKWTPFSPLYDALNNVQNHLNEWAAPKENTFVNKSSGPRIYIDDYTNKNDVFIGISEP
                     SDDDSDVEWGSTLKRRLTVNKQDLVQRFKERVQVLALRAIDPKNGGGIIKKSKVGIPV
                     QKGVGVPTAPVAEAIQKTVVNSNSRSVVSGNPRKQSVVVAKEMGKLDLNVEFNNNEGE
                     EAAPPRMASGARGHMHGDEENIEGIGFFEGLDEFLNSLPIISVVNEEKVKAAAA"
     misc_feature    617..805
                     /gene="LOC139904350"
                     /note="DnaJ domain; Region: DnaJ; pfam00226"
                     /db_xref="CDD:395170"
     misc_feature    order(704..712,734..736,743..748,755..760)
                     /gene="LOC139904350"
                     /note="HSP70 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99751"
     misc_feature    <974..>1279
                     /gene="LOC139904350"
                     /note="DNA translocase FtsK; Provisional; Region:
                     PRK10263"
                     /db_xref="CDD:236669"
ORIGIN      
        1 tttttatgtt tacccaacca aattcgtttt ccgtcgagac accatcccct tttaagcctc
       61 tcactaccta cttcccactc tctacggcgg ccatggaaac atttctcttg agatattgaa
      121 gaagccagat acagataaac aatgaaccct tgtttgactt tcactctcgc cataaaccat
      181 tcctactccc tcaacactcc acgcccaaca tcccaacagt ttccagacaa accctaattt
      241 tatttttatt tttattttta ttaccatttt ctttctctgg aattttcttt tcatcaatca
      301 ggtttattat catttgcatg cggttctcca gcagcgtgct gttctgtttt gtggtctgtt
      361 ttaggtacgt aataggaacc taaaacagtt aagaatggac ccgcatagct tcatagcccg
      421 agcagaagct caaaggtgga ttggtattgc agagaagctt cttataagcc atgaccttgt
      481 cggatccaaa acattcgcaa ttcgagcccg agaatccgac cccagacttg aagctgccga
      541 tcagatatta gcaattgcag atacgttgtt agccgctgaa aaacgtctag tcggaagcaa
      601 cggaaatcag cagccagatt actatgcgat acttcaactg gttcagtttg ttcaggattc
      661 agatcacata acctctcagt atagacggtt agctgttata ttaaatccac atcataatcg
      721 atttccttat tctgatcaag cctttcagct tattaatgat gcttgggctg tcttatcaaa
      781 ccctatgcgc aaatctatgt atgattctca acttgatttt ggacatcaac aacaacaaca
      841 tatcaataat ttggggttta atatccaaca acatcaacat cagcatcaca gtcctaatca
      901 gcatcaccat catcaacagc aacaacaaca gcagcaacaa cataatttct tttcaattaa
      961 tcaggaatta gctgaacccc aacaaacttt tcaaactagg ttacaaccta gtcatcaaca
     1021 acataatttt ctgtcgcaac ccaacgttgc ggttcgtgaa ccgcaggagc agatgtttca
     1081 tcatcaagat cagcaagaac agttgtttca gccacaggtg cagccgtttc aagttacgtc
     1141 cacaccccat caacaaacta gaccaccatc gcaacctgct caatcgcagc cgccactggg
     1201 tattcaatcg ccgtctgggc ctactgttgc agccacacaa tctccatttt cttggccaca
     1261 ggccccacca gtatcacagt ctcagcaaca gacactacat tttcagcagc aggaacaaca
     1321 gaaccagaca caacagcagc agcagcagga acaacaacga cagcaacatc aggatcctat
     1381 acaacagaat gctgcacctg ttgagcttcc tagtcaggtc aatagtaacg ttaatggggt
     1441 aaatgaggaa gaaactgaag cagaaacaga ggcagaacca gaggaagttg gtgaggatgt
     1501 ggatgatgat tcacctacat tttggactac gtgtcctttc tgtttttaca tgtacgagta
     1561 tcctagtgtt tatgcagact gcactcttcg ttgtgacaac tgtaacaggg cgtttcaggc
     1621 tgtgcgaata tcatctccac cggcgatagt tgaaggtcaa gaggcgtatt tctattcttg
     1681 gggattttat ccaattgggg tttcaatgtc acatctgcag agcaaaaata aaaaggttgc
     1741 aacaccaaag tggacacctt tttcaccatt gtatgatgcc ttaaacaatg tacagaacca
     1801 tttaaatgag tgggcggccc cgaaggaaaa tacttttgtg aacaaaagtt cggggccgcg
     1861 tatctacatt gatgattata ccaataagaa tgatgtgttt attggaatct ctgagcctag
     1921 tgacgacgac tctgatgtcg aatggggtag taccttgaaa agaagattaa ctgtaaacaa
     1981 acaagatttg gtacaaaggt tcaaagagag agtacaagtt ttagccctta gggcaataga
     2041 tcctaaaaat ggaggaggca tcattaagaa gtcgaaagtt ggtattccag tgcaaaaggg
     2101 tgtgggggtg cctactgctc cagtggcaga ggctatccaa aaaaccgtgg ttaatagtaa
     2161 ctcaagaagt gtggttagtg gtaacccaag aaagcaatcg gtggtggttg caaaagaaat
     2221 ggggaagctg gatttgaatg tagagtttaa taataatgaa ggggaagagg ctgctccacc
     2281 acggatggct agtggggccc gtgggcacat gcatggagat gaagaaaaca ttgaaggtat
     2341 tgggtttttc gaaggacttg atgagttcct aaacagcttg ccaataattt ctgttgttaa
     2401 tgaagaaaaa gttaaagctg ctgctgctta attattatta ttattattat tattattatt
     2461 atgaacaaga ctcctttctt gttgtagctg tagtttgttg tagttagcaa tttcaggtaa
     2521 tgaatgatga tgtagtgcac tgcagctaat tactattaca gtactatctt tagtgttgta
     2581 tatccgactg caacgatgta ttttactgcc tgtttttttg ttttgttttc cagagtcaag
     2641 acttgtacct atttaccatt agctttatgt gtttcgtatt tgtgaacatc tcaagtactt
     2701 gcatttca
//
LOCUS       XM_071886290             572 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein bS16m/bS16c (LOC139904351), mRNA.
ACCESSION   XM_071886290
VERSION     XM_071886290.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..572
                     /gene="LOC139904351"
                     /note="small ribosomal subunit protein bS16m/bS16c;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139904351"
     CDS             176..562
                     /gene="LOC139904351"
                     /codon_start=1
                     /product="small ribosomal subunit protein bS16m/bS16c"
                     /protein_id="XP_071742391.1"
                     /db_xref="GeneID:139904351"
                     /translation="MVVRLRLARLGCRNRPFYRVMAADSRSPRDGKHIEVLGYYNPLP
                     VQDGGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGTRDTRP
                     VDPLSGRVITPDQPTKASVDHEENKS"
     misc_feature    182..424
                     /gene="LOC139904351"
                     /note="ribosomal protein S16; Region: S16; TIGR00002"
                     /db_xref="CDD:272848"
ORIGIN      
        1 gtaaggaaaa agcccgaccc ggtgccacaa attttgtgta atcgatccat caaaattaaa
       61 aaaccctaaa tcacaaaata catccaataa ctgatatatt attgttcatc gacgagtctc
      121 ctcttcaaca caaagctgct tcttaattcg tcttctagct ctacagaaca aaaaaatggt
      181 ggttcgattg agactggctc gactgggatg cagaaaccgg ccgttttaca gagtaatggc
      241 agcagatagt agatccccaa gagatggcaa acatatcgaa gttttgggtt actataatcc
      301 tttgccagtt caagatggtg gtaagcgaat ggggctcaat ttcgaccggg tgaaatactg
      361 gctatcagtt ggtgcacaac cctcagatcc agtgcaacgt attctgttca gagcagggtt
      421 gctaccacca ccacccatgg ttgcaatggg acgcaaaggt gggacacgtg acacacgtcc
      481 tgtcgatcct ttgagtgggc gtgtcatcac accagaccaa ccaactaaag catctgttga
      541 tcatgaagaa aataaatcat gaacttgcaa tc
//
LOCUS       XM_071886291             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein C2-DOMAIN
            ABA-RELATED 10-like (LOC139904352), mRNA.
ACCESSION   XM_071886291
VERSION     XM_071886291.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139904352"
                     /note="protein C2-DOMAIN ABA-RELATED 10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904352"
     CDS             61..462
                     /gene="LOC139904352"
                     /codon_start=1
                     /product="protein C2-DOMAIN ABA-RELATED 10-like"
                     /protein_id="XP_071742392.1"
                     /db_xref="GeneID:139904352"
                     /translation="MQKTKTRVIKGNCNPVWNDELTLTMRDPEAPIHIAMYDKDRFSN
                     DDSMGVAEIDVKPYIECLKMGLNLNNLPNGTKLDRVQPKKHNYLADESCIIWQNGKII
                     QDMVLRLRDVECGEVVVQIELVPLPGRRLNV"
     misc_feature    <64..405
                     /gene="LOC139904352"
                     /note="C2 domain; Region: C2; cl14603"
                     /db_xref="CDD:472691"
ORIGIN      
        1 gaaagacacc cgataattag cttccaattc ggctatatta tctgaataac ttatgttgta
       61 atgcagaaaa caaagactag ggttatcaag gggaactgta atcctgtatg gaatgatgaa
      121 ttgactttaa ccatgaggga ccctgaagct cctatacata ttgccatgta cgacaaggac
      181 aggttcagta acgatgacag catgggagta gcagaaatag atgtaaaacc gtacatcgaa
      241 tgccttaaaa tgggtttaaa cctcaacaac ctcccgaatg gtactaaact tgatcgtgtt
      301 caacctaaaa aacataacta cttagctgac gaaagctgca tcatttggca gaatgggaaa
      361 atcattcaag acatggttct tcgattaaga gatgttgaat gtggtgaagt tgtagttcaa
      421 atagagttgg ttcctcttcc gggtcgtaga ttaaacgttt agatagtttg attcacttga
      481 atattactcg tactattttg tttgtacaat atacttgagt agaatttatg agtgtaacaa
      541 gattagtgtg atatgattta atgtagtctg
//
LOCUS       XM_071886292            1462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heat shock factor protein
            HSF30-like (LOC139904353), mRNA.
ACCESSION   XM_071886292
VERSION     XM_071886292.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1462
                     /gene="LOC139904353"
                     /note="heat shock factor protein HSF30-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904353"
     CDS             123..1337
                     /gene="LOC139904353"
                     /codon_start=1
                     /product="heat shock factor protein HSF30-like"
                     /protein_id="XP_071742393.1"
                     /db_xref="GeneID:139904353"
                     /translation="MQGVKETIPVELSITSGDSGDSQDFLKLKEEYEILNKDGSEKDI
                     SEEILTIKEEPVLVYDDDDDCFLGSGSLLNSPAVRVPKPIEGLRDGGPPPFLKKTFEM
                     VDDPTTDSIISWSDSKKSFILWDPHKFSTHLLPQRFKHNNFSSFVRQLNTYRFKKIDP
                     DRWEFANELFQKDKKHLLRDIKRRTKQAQMMQKQAEFEQEACVHQINRSMESELKNLR
                     RDGAMLRQEIIKVKEQQQNTEKHLEIVQERMLRMEFKQQKLLIFKSKAFRNPVFVELL
                     QRSVQKQEMGSVEMYKRRKLEQMVNTGSGSVVDEVVNRVVGEEWNMVDPEGSYTAFSS
                     DESISPIEDHNKTASEEYYGLNRSDYNSTENFILWEKLMQDELIFDDNKSDGKNQSKT
                     YLQEWEELIPNV"
     misc_feature    393..674
                     /gene="LOC139904353"
                     /note="heat shock factor; Region: HSF; smart00415"
                     /db_xref="CDD:214654"
ORIGIN      
        1 tgctccacaa ccgctaacat taaccggcaa catcatttat catttatcct tattatatca
       61 acaattacac acaccccctc acttaaagct tcaatctttc acttccaaga acacacacac
      121 tcatgcaagg tgtaaaagaa acaattccgg ttgaactttc catcacctcc ggcgacagtg
      181 gtgatagtca agatttcttg aaactcaaag aagaatatga gattttgaat aaagatggta
      241 gtgaaaaaga tatatcagaa gagatactga caattaaaga agaacccgtg ttggtttatg
      301 atgatgatga cgattgtttt cttggtagtg gcagtttgtt gaactctccg gccgtacggg
      361 taccgaaacc gatagaaggg ttgagagacg gcggacctcc accgtttctg aagaaaacat
      421 tcgaaatggt ggatgaccca acaacagatt caatcatatc atggagtgat tctaaaaaaa
      481 gtttcattct ttgggatcct cataagtttt ctactcatct tttgccacaa agattcaagc
      541 ataataattt ctctagcttt gttcgtcaac tcaatactta taggttcaag aaaatcgacc
      601 ctgatcggtg ggagtttgca aatgaattgt tccaaaagga taagaaacat ttgttaagag
      661 atataaagag gagaactaaa caggcacaaa tgatgcaaaa acaagctgaa ttcgaacaag
      721 aagcttgtgt tcaccagata aaccgctcaa tggaatctga gctcaaaaat ctaaggagag
      781 atggagctat gctgagacag gagatcatca aggtgaaaga acaacagcag aacaccgaaa
      841 agcatttgga aatcgttcaa gaacgtatgt taagaatgga attcaagcaa caaaagttgt
      901 tgattttcaa atcgaaagct tttagaaatc ctgtttttgt tgaacttttg cagcgttcag
      961 tgcagaaaca ggaaatgggt agtgttgaaa tgtacaaaag gcggaaactt gagcaaatgg
     1021 tcaacacggg tagtggtagt gttgttgatg aagtagtgaa tcgggttgtt ggagaagagt
     1081 ggaatatggt ggatcccgag ggcagctata cagcattttc ttccgatgaa tcgataagcc
     1141 caattgaaga tcataataag acagctagtg aggaatatta tggattgaat agatctgatt
     1201 acaattcaac agagaacttc atattgtggg agaagctaat gcaggatgaa ttgatattcg
     1261 atgataacaa atctgatgga aagaatcaat ctaaaactta tcttcaagaa tgggaagaat
     1321 tgattccaaa tgtgtaatta aggccggcgt atactatata tacataccgg cagtagctag
     1381 ataatgacag acacagtgtg cactacatat atgtttgggt ttgttttatt gaatctttgt
     1441 cgtaggaatt atgatagtga ac
//
LOCUS       XM_071886293            1919 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BTB/POZ domain and ankyrin
            repeat-containing protein NPR1 (LOC139904354), mRNA.
ACCESSION   XM_071886293
VERSION     XM_071886293.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1919
                     /gene="LOC139904354"
                     /note="BTB/POZ domain and ankyrin repeat-containing
                     protein NPR1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139904354"
     CDS             152..1876
                     /gene="LOC139904354"
                     /codon_start=1
                     /product="BTB/POZ domain and ankyrin repeat-containing
                     protein NPR1"
                     /protein_id="XP_071742394.1"
                     /db_xref="GeneID:139904354"
                     /translation="MDNRTGFSDSTDIISGSSGVSYAGTTLELPNVSALNRLSETLES
                     ILLEPANSFSDAKIILSGGREIPVHRCILSGRSPFFKNKFCDKNVKLKMKELGCDYEI
                     GYESLICALKYIYSGKIMGLPKDICACVDEECSHEACRPAVDFMVELVYAFHIFQIPE
                     MVALWQRRLLDILDKASADDILVILSVANTCGQSCEELLSKCINILVKSNVDFVTLDK
                     ALPEQIVKQIIDSRFNLGLDKPGSNSFPDKHVKRVHRALDSDDVELVTMLLREGHTSL
                     DGSCALHYAVAYADAKTTTELLDLALADVNHKNSRGYSVLHVAAMRKEPNIIVSLLTK
                     GARPTDPTPDGRKALQISKRLTRAIDYYKSTEEGRECSKGRLCIEILEQAERRNPLLG
                     EASASLAMAGDDLRVKLLYLENRVALASLLFPTEAKVAMEIAQVDGTCEFTLESVYSQ
                     NLANAQLTMDLNDAPFLIKEEHLARLTALSKTVELGKRFFPRCSEVLNKIVDTQEVDE
                     WKRKNTTPEEQELKKQKYSQVQEALNKAYTEDKQEFDRSNAISSSSSSTSTSAVVNPR
                     TSQFTFGN"
     misc_feature    257..670
                     /gene="LOC139904354"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in plant
                     regulatory proteins, NPR1-4, and similar proteins; Region:
                     BTB_POZ_NPR_plant; cd18310"
                     /db_xref="CDD:349619"
     misc_feature    <911..>1213
                     /gene="LOC139904354"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    980..1078
                     /gene="LOC139904354"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1082..1177
                     /gene="LOC139904354"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1208..1798
                     /gene="LOC139904354"
                     /note="NPR1/NIM1 like defence protein C terminal; Region:
                     NPR1_like_C; pfam12313"
                     /db_xref="CDD:372037"
ORIGIN      
        1 ttttcttaac ataaatggtc gccaatagct caatttcact ctaatcaata ctgggtcaat
       61 ctctaaatta acacccacat actattccac agtctcttga tcgattgttg tattgtatag
      121 tttccagttt ttgatcaatt tttgattctt gatggataat cgaactggtt tttctgattc
      181 aactgatata ataagtggga gcagcggtgt ttcatatgcg ggtaccaccc ttgaactacc
      241 taatgtttct gctcttaatc gtctatcaga aaccctagaa tcaatcttgt tggagcctgc
      301 taattcattc tccgatgcca aaattatact ttccggtggc cgggaaatcc ctgtccaccg
      361 gtgtatattg tcaggtcgta gcccgttttt caagaataaa ttttgtgata aaaatgtgaa
      421 attgaagatg aaggaattgg gttgtgatta tgaaattgga tatgaatcgt tgatatgtgc
      481 gttgaagtat atttacagtg gtaaaataat gggtttgcct aaagatatat gtgcctgtgt
      541 tgatgaagaa tgttcacatg aagcctgtcg ccccgctgtc gattttatgg tggagctggt
      601 ctacgctttc cacatttttc agatccctga aatggttgct ttgtggcaga ggcgtctgct
      661 agacattctt gacaaggctt cagccgacga cattctagta atcctatcag ttgcaaacac
      721 atgtggtcaa tcatgcgagg aacttctttc aaaatgtatc aacatattag tcaaatctaa
      781 cgttgacttt gtaactctcg ataaagcttt gccagaacag atagtcaaac aaattattga
      841 ttctcggttt aaccttggtt tggacaagcc cggaagcaat agtttcccag acaagcacgt
      901 aaaacgggtc cacagagctc tcgattcaga tgacgttgaa ttagtcacaa tgttactaag
      961 agaaggccat acgtctttag acggttcctg tgctcttcac tatgctgtcg cttatgctga
     1021 tgctaaaacg acaacagagt tgcttgattt ggcacttgca gatgtgaatc ataaaaactc
     1081 aagggggtat agtgtacttc acgttgctgc aatgagaaaa gaaccgaata tcattgtatc
     1141 tcttctcaca aagggggccc gccctactga tcctaccccg gatggaagaa aagcacttca
     1201 gatttcaaag agactcacga gagcgattga ctattataag tcaactgagg aaggtagaga
     1261 gtgtagcaaa ggacgattgt gcattgagat acttgaacaa gcagaaagac gaaacccgtt
     1321 gctaggagag gcttctgctt ctctagctat ggcaggagat gatttgcgtg tcaagttgtt
     1381 gtatcttgaa aatagagttg cattggcgag ccttctattt ccgacggaag cgaaggttgc
     1441 gatggagatt gcgcaagttg atgggacgtg tgagttcaca ctagaaagtg tatattccca
     1501 gaatttggca aatgcacagt taaccatgga tttgaatgat gcacctttct tgatcaaaga
     1561 ggagcatttg gccaggttaa cagcactctc taaaacagtg gaactaggga aacggttttt
     1621 tcctcgatgc tcagaagtac taaataagat agttgacaca caagaagtag atgaatggaa
     1681 aaggaaaaac acaactccgg aagagcaaga attaaagaag caaaagtaca gtcaagttca
     1741 agaagctcta aacaaagctt acaccgagga caaacaagaa ttcgacaggt ccaatgccat
     1801 ctcctcttca tcttcatcca catccacatc tgctgtggtc aatccacgaa ccagccaatt
     1861 cactttcgga aattagtact acccggttac tataactcac tgctttatta tttactgta
//
LOCUS       XR_011778743             839 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904355), ncRNA.
ACCESSION   XR_011778743
VERSION     XR_011778743.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..839
                     /gene="LOC139904355"
                     /note="uncharacterized LOC139904355; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904355"
     ncRNA           1..839
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904355"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904355"
ORIGIN      
        1 ttggttaatt cacgcacccg cacccgaact agagggacta aacttgcaaa gaggccaaag
       61 atttgactag gtcaactagt caaaccttca acctcctcct ctcattttct ctctttctct
      121 cttttcatac ttccattttc ctctcaagaa ctcaaccaag attcatcatc taatttcgga
      181 tttggaggct aacatcaaaa caaattacat atttggaatc ctctcttcat cctcttcgac
      241 ttgataccaa tttcatctca tttgggtcaa gactagcatt gttctttgca cacgtttact
      301 tgttgaagta ctttactact cgtgcactca aggtctttga acgctatgtg aaacatgctt
      361 ccgctcatta ttttgatact tgcattggat gtcgagtata catgcatttc atggagcgtc
      421 ttttgacttt ctttaaaact gtgtcgcata ggtttcacat gtaactataa ctttgtaacg
      481 taacttttgg atgaacaatt cttgtaaact ttgaaacaat ctttattttt gaaaggaatg
      541 cgacatatct ttggtcaaat gtcacgttaa agacctatga ccacgcaacg ggacctaagt
      601 agtcgacgcc gtcaattgac gatttgtcgg ggtcgctaca agtggtatca gagcattggt
      661 tgtagggatt tagagttcat tggtgtcaac cccgagtcat aggttacatt agtgaatcta
      721 gactacaacc ggcatataga catgaagtag gaattacttg actatttgtg catttatact
      781 cgaacgtttc tactcataac taactctcgc ttcatctaaa tctttcattg tttaatttg
//
LOCUS       XM_071886294            1973 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides IQ domain-containing protein
            IQM1-like (LOC139904356), mRNA.
ACCESSION   XM_071886294
VERSION     XM_071886294.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1973
                     /gene="LOC139904356"
                     /note="IQ domain-containing protein IQM1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 37 Proteins"
                     /db_xref="GeneID:139904356"
     CDS             96..1667
                     /gene="LOC139904356"
                     /codon_start=1
                     /product="IQ domain-containing protein IQM1-like"
                     /protein_id="XP_071742395.1"
                     /db_xref="GeneID:139904356"
                     /translation="MGLSLSLLSSAWEEILDHSFLILPYELKNVSNAENCKISESETI
                     LEEPEDSFADLSRRNSINLNNHQPLKIMLDTTLSFKNLIQDFKVSEPKNLEFKTRGLT
                     SPGSTVFFSPRPVSELNAAATTVQKIYKSYRTRRNLADCAVVVEELWWKALDFAALDR
                     SSVSFFDVKKPETATSRWARARTRAAKVGKGLSKNEKAQKLALQHWLEAIDPRHRYGH
                     NLHLYYDIWFESESCQPFFYWLDIGDGKETNLEKCPRVRLQQQCIKYLGPNERESYEV
                     IVEKGKLVYRQSGSLLETVEGTKWIFVLDTLKKLYVGQKRKGLFQHSSFLAGGATTAA
                     GRLVAHGGILEAIWPYSGHYLPTEENFRDFICFLEENNVDLTNVKRCSIDDDDVGFSF
                     KVTTQPETKPKPLVIPRARPQDILRTPTSAKDATTPSFIHGLTNGPISARFQETNLIS
                     TKWTSGTGPRIGIVRDYPSELQFRALEHVNLSPRINQGNLGPIPSPRPSSNVRLSPRI
                     SYMGLPSPRTPITTN"
ORIGIN      
        1 tttttttttt atacgccaga aatcaacaaa ctttgagcaa ttatttcggc aaagctcgag
       61 tcttgattga aagaaatctt aaaatatctg atctgatggg tttgtcctta tcactgttat
      121 catcagcctg ggaagaaatc ttagatcata gttttttaat attgccttat gaactcaaaa
      181 acgtatctaa cgccgaaaac tgcaagatat ctgaatcaga aacaatattg gaagaacctg
      241 aagattcatt tgctgatttg agtagaagaa actccatcaa tttgaacaac catcaacccc
      301 taaagataat gcttgatacc accctttctt tcaagaatct tattcaggac ttcaaagttt
      361 cagaacccaa aaatttggaa tttaaaacaa ggggtttgac ttctccgggt tcaacggtat
      421 tcttctcccc tcgacccgtc agtgaactca atgctgctgc aactacagtt cagaaaatat
      481 acaaaagtta cagaacaaga aggaatctag ctgattgcgc ggtagttgtt gaggagttat
      541 ggtggaaggc tttagatttt gcagccttgg atcggagttc tgtttcgttt ttcgatgtta
      601 aaaaacccga aactgcgaca tctcggtggg cccgggctcg aactagagct gcaaaagtgg
      661 gaaagggtct atccaagaat gaaaaagctc aaaaattggc cttgcaacat tggcttgaag
      721 ccattgaccc acgccatcgc tatggccata atttgcacct atactatgat atttggtttg
      781 aaagcgaaag ctgtcaacct tttttctact ggttggatat tggagatggg aaagaaacga
      841 atcttgaaaa atgtccgagg gtgcgtttac aacaacaatg cattaaatat ttaggcccca
      901 acgaacggga atcatacgaa gtgatcgttg aaaaggggaa gctggtatac agacaaagtg
      961 gttcgctttt ggaaactgtt gagggtacta aatggatctt cgttcttgac acattaaaga
     1021 aattgtatgt tggccagaag agaaaaggtt tgtttcaaca ttcgagtttt ctagccggtg
     1081 gtgccaccac tgctgccgga agattggtgg cccatggcgg cattcttgag gcaatatggc
     1141 cttacagcgg tcactatctc ccaacggaag aaaactttag ggatttcatt tgcttcttgg
     1201 aggaaaacaa cgttgatctc actaacgtta agagatgctc gattgatgac gatgatgtag
     1261 gattttcgtt taaggtcacc acccaacccg aaacaaagcc aaaaccgcta gtcattccac
     1321 gtgcgagacc acaagacatt ctacgtacac ctactagtgc aaaagatgca accacaccta
     1381 gctttatcca tggtctaacc aacggtccca tttcagcccg ttttcaagaa actaacctca
     1441 tttctaccaa atggacctcg ggaactggtc cacgtatcgg cattgttcgt gattatccaa
     1501 gcgagctaca atttcgagcc cttgaacatg ttaacttatc tcctcgtatt aatcaaggga
     1561 acttggggcc aattccgtca cctagaccga gctcgaatgt caggctgtct ccaaggattt
     1621 catacatggg actccctagt cctaggaccc caatcaccac taattaatta atcgagcttt
     1681 ttttctttct ttagagtttg accttttgta tcaagtggag acttgtacaa agttagaggt
     1741 gtttacattc ttttttgctt gagaataggt ctggaatggg ttcaaacaaa cacgaataaa
     1801 aaatgaaccc tggtgtctat ttttttttta ttcattattt tttgtagaag tgtatagttc
     1861 atagttgttg cttatgcata gttttgtagt aacccaaact gctctgtttg tgcagtaatt
     1921 gggtttgtat tttattatta gctgattatt tcatctcttt gtaacacatg ata
//
LOCUS       XM_071886295            1582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic initiation factor
            4A-15 (LOC139904357), mRNA.
ACCESSION   XM_071886295
VERSION     XM_071886295.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1582
                     /gene="LOC139904357"
                     /note="eukaryotic initiation factor 4A-15; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 68 Proteins"
                     /db_xref="GeneID:139904357"
     CDS             161..1402
                     /gene="LOC139904357"
                     /codon_start=1
                     /product="eukaryotic initiation factor 4A-15"
                     /protein_id="XP_071742396.1"
                     /db_xref="GeneID:139904357"
                     /translation="MAGVAQESSQFDARQFDSKMNELLSTDGQDFFTSYDEVYDSFDA
                     MGLQENLLRGIYAYGFEKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQL
                     DYNIVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVH
                     VVVGTPGRVFDMLRRQSLRSDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGV
                     FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYET
                     LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI
                     TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTVDDERMLA
                     DIQKFYNVVVEELPSNVADLI"
     misc_feature    257..1399
                     /gene="LOC139904357"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(335..340,344..352,359..361,413..436)
                     /gene="LOC139904357"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350697"
     polyA_site      1582
                     /gene="LOC139904357"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttgagattat tttcactttc aacctaacta aaaaagcatt ccaattccct caactcaaca
       61 ctccacggcc aacttcccca tcccaggagt tttgagaaaa ccctaataac tcactctttt
      121 actgctactt tatttgatct ctatattttc gtcaatcagt atggcaggtg ttgcacaaga
      181 aagttcccag tttgatgctc gtcagtttga ttccaaaatg aatgagttgc tttctaccga
      241 tggacaggat ttctttacat catatgatga ggtttacgat agttttgatg ccatgggtct
      301 gcaagaaaat cttttaagag gcatctatgc atatggtttt gagaagccat ctgcaattca
      361 gcaaagggga attgtcccct tcaccaaggg tcttgatgtt attcaacaag ctcaatcagg
      421 aaccggaaag actgcaactt tctgctccgg gatccttcaa caactcgact ataacattgt
      481 ggagtgtcag gctttggttc tggctcctac tcgtgagctt gcacagcaaa ttgagaaagt
      541 tatgcgagca cttggtgact accttggtgt aaaggtacat gcttgtgttg ggggaactag
      601 tgttcgtgag gaccagcgaa tcctctcagc tggagtacac gttgtagttg gcacccctgg
      661 tcgtgtcttt gacatgctta ggaggcagtc actacgttct gattacatca agatgtttgt
      721 gctcgatgaa gctgatgaaa tgctttccag aggtttcaag gatcagattt acgatatctt
      781 ccagctattg ccatcaaagg ttcaggtggg agtgttttct gcaacaatgc ctcccgaagc
      841 tcttgagatt acaaggaagt tcatgaacaa acccgttagg attctcgtca agcgtgatga
      901 actcacactc gaaggtatta aacaattcta tgtcaatgtc gaaaaagaag aatggaagct
      961 agagacgctt tgcgatctct atgaaacttt agcaatcacc caaagtgtca tctttgtaaa
     1021 cacccgacga aaggttgact ggttgactga caagatgaga agccgtgacc atacagtctc
     1081 agccactcat ggtgacatgg accagaacac acgtgatatc attatgcgtg agttccgttc
     1141 aggatcttct cgtgttctca tcaccaccga tctgttggca cgtggtattg atgtgcaaca
     1201 agtttcactt gtgatcaact acgatctccc tacacagcct gaaaactacc tgcatcgtat
     1261 tggacgaagt ggacggtttg ggagaaaggg tgttgccatt aactttgtga cagtggatga
     1321 cgaacggatg cttgcagata ttcagaaatt ttacaacgtg gtggttgagg aactgccatc
     1381 aaatgttgct gatcttattt agaaagattt tggtaagtgg gtttgttcag taagaaaggt
     1441 tagaacctgt tttttgaaat ctttcggttt tgtttgtcta agttattatt atcaaagact
     1501 ttggtgttat aaaatatttg cgactcgtgt ttgtactttg taccctaaag tttctttaat
     1561 tactatggat ttgttagttg aa
//
LOCUS       XR_011778744            1934 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X1, ncRNA.
ACCESSION   XR_011778744
VERSION     XR_011778744.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1934
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1934
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 tgttctttta tagcttatgt ttaaatgttt aattacatta gcttttccac atttcatatt
       61 catacatgtg ttgattgaaa agattttctt cctcttagaa gaaattgttc tgctgatgtt
      121 cattagtgct ccctcttttt atttactttg gatgtcaaga tcaaggttgc tgcaagaatt
      181 tgaatttaaa ttgattacca tcattgtcat ctctttctca ttatgtataa tattcactca
      241 ttctttgatt gcgatttttg aagttttctt tatgcacaca atgtgttcca tgttatatca
      301 ataacaagta gcttttatat tttgtcagta tgtaatatgt tattgacttc atatattttg
      361 aaagaatagg ttgttgaaat catgagttga gttaaatgta tgtgcttatc atggagtttt
      421 tcatctagat ccaacaaatg aaatgggtga tccatcttgc cagtaggtag atgcagaaag
      481 aatggagaaa aatgattata gatatgtaat tgaacaagta actctctgtt tatcatttac
      541 tttgtcaatc ctatatgtat cttttttttt cttcatataa atatgtaatt tactgactgt
      601 cttacgtatg taattgaatc tagggttttg gttttagatt aagctaatac ttgaatatgt
      661 tagggtttag ccattgattt ttctgatcga tgtaataagt taattattaa tgtgtgtttt
      721 gtatgtggaa cagataagaa gtatttccaa attttatata attggatggt gttgatgctg
      781 aagatctgat atgcatatgc acaaagctgt gagtacagat tctgttaact atgcagcaat
      841 ctgtgaagta ttctgccact tgatgtgttt gttttgcttt taatacattg ggcctacatg
      901 ctttagttgc atatatataa taataattaa aaattaacaa agatactttc aagcatgatt
      961 tttctttgtt tgcttttgtt ttagttgcat ataggtatat gttcaaattc aatttggaga
     1021 acgatgtgat tattggagag acaacatgag gatgatgttg ataaaattta ttccatttat
     1081 gacaaggttg ctcgcatctc tgttgtggtt gcctggttgg ttagcttctg cagcagaagc
     1141 ggttgttaca accctatgat attacaacga aattttaaca ttaattattt gacagtgaag
     1201 aaaatgtcaa cgagtttgag agttatttgt gtaggtatgt atgttccacc atatgattga
     1261 gattaacaga acgaatagtg atttatgttt gttttttcac gattgcttaa gacaatgttt
     1321 tagatatgga ggtacgactt aatgaatgat gtccgtgcgg gctaattttt gtaccttttg
     1381 aactatcatc ttctattaag agatacttgt aggttatttc ttatatgcaa aaaacattca
     1441 ttaagtttat aactgttttt gtattataat agagaagggt ctaatacaat ttttgagtct
     1501 gaagcatgga ccatacaact tgattttggg gatcaaagac aacaaagatt gattggtgtc
     1561 acaatgggtc acatatcaaa tgaagaatag aggtgcaggt gtatgttcgt ttcaagaggt
     1621 tgtggtatgc aattttgagt gtatggaaaa cataacgaaa aaatagatta tagtataaag
     1681 tgggtatgta ggtaatcttg gcttttaaac ccatgtactt attgtgatga gtaagggtgt
     1741 tttcaaggtt gggttacctc ctctacaacc tgagttttaa tgccccagct attagttagt
     1801 attagttaag tactctggat agtcctcttg tgttgaaatt tgagtagtca atttgggttg
     1861 agttattatg tgtaaagtgg gtatgcatgc gtgcatacta tttgtatcat cattgttata
     1921 tattaataaa gttt
//
LOCUS       XR_011778745            1758 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X2, ncRNA.
ACCESSION   XR_011778745
VERSION     XR_011778745.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1758
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1758
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 tgttctttta tagcttatgt ttaaatgttt aattacatta gcttttccac atttcatatt
       61 catacatgtg ttgattgaaa agattttctt cctcttagaa gaaattgttc tgctgatgtt
      121 cattagtgct ccctcttttt atttactttg gatgtcaaga tcaaggttgc tgcaagaatt
      181 tgaatttaaa ttgattacca tcattgtcat ctctttctca ttatgtataa tattcactca
      241 ttctttgatt gcgatttttg aagttttctt tatgcacaca atgtgttcca tgttatatca
      301 ataacaagta gcttttatat tttgtcagta tgtaatatgt tattgacttc atatattttg
      361 aaagaatagg ttgttgaaat catgagttga gttaaatgta tgtgcttatc atggagtttt
      421 tcatctagat ccaacaaatg aaatgggtga tccatcttgc cagtaggtag atgcagaaag
      481 aatggagaaa aatgattata gatatgtaat tgaacaagta actctctgtt tatcatttac
      541 tttgtcaatc ctatatgtat cttttttttt cttcatataa atatgtaatt tactgactgt
      601 cttacgtatg taattgaatc tagggttttg gttttagatt aagctaatac ttgaatatgt
      661 tagggtttag ccattgattt ttctgatcga tgtaataagt taattattaa tgtgtgtttt
      721 gtatgtggaa cagataagaa gtatttccaa attttatata attggatggt gttgatgctg
      781 aagatctgat atgcatatgc acaaagcttt gcatataggt atatgttcaa attcaatttg
      841 gagaacgatg tgattattgg agagacaaca tgaggatgat gttgataaaa tttattccat
      901 ttatgacaag gttgctcgca tctctgttgt ggttgcctgg ttggttagct tctgcagcag
      961 aagcggttgt tacaacccta tgatattaca acgaaatttt aacattaatt atttgacagt
     1021 gaagaaaatg tcaacgagtt tgagagttat ttgtgtaggt atgtatgttc caccatatga
     1081 ttgagattaa cagaacgaat agtgatttat gtttgttttt tcacgattgc ttaagacaat
     1141 gttttagata tggaggtacg acttaatgaa tgatgtccgt gcgggctaat ttttgtacct
     1201 tttgaactat catcttctat taagagatac ttgtaggtta tttcttatat gcaaaaaaca
     1261 ttcattaagt ttataactgt ttttgtatta taatagagaa gggtctaata caatttttga
     1321 gtctgaagca tggaccatac aacttgattt tggggatcaa agacaacaaa gattgattgg
     1381 tgtcacaatg ggtcacatat caaatgaaga atagaggtgc aggtgtatgt tcgtttcaag
     1441 aggttgtggt atgcaatttt gagtgtatgg aaaacataac gaaaaaatag attatagtat
     1501 aaagtgggta tgtaggtaat cttggctttt aaacccatgt acttattgtg atgagtaagg
     1561 gtgttttcaa ggttgggtta cctcctctac aacctgagtt ttaatgcccc agctattagt
     1621 tagtattagt taagtactct ggatagtcct cttgtgttga aatttgagta gtcaatttgg
     1681 gttgagttat tatgtgtaaa gtgggtatgc atgcgtgcat actatttgta tcatcattgt
     1741 tatatattaa taaagttt
//
LOCUS       XR_011778746            1718 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X3, ncRNA.
ACCESSION   XR_011778746
VERSION     XR_011778746.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1718
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1718
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 tgttctttta tagcttatgt ttaaatgttt aattacatta gcttttccac atttcatatt
       61 catacatgtg ttgattgaaa agattttctt cctcttagaa gaaattgttc tgctgatgtt
      121 cattagtgct ccctcttttt atttactttg gatgtcaaga tcaaggttgc tgcaagaatt
      181 tgaatttaaa ttgattacca tcattgtcat ctctttctca ttatgtataa tattcactca
      241 ttctttgatt gcgatttttg aagttttctt tatgcacaca atgtgttcca tgttatatca
      301 ataacaagta gcttttatat tttgtcagta tgtaatatgt tattgacttc atatattttg
      361 aaagaatagg ttgttgaaat catgagttga gttaaatgta tgtgcttatc atggagtttt
      421 tcatctagat ccaacaaatg aaatgggtga tccatcttgc cagtaggtag atgcagaaag
      481 aatggagaaa aatgattata gatatgtaat tgaacaaata agaagtattt ccaaatttta
      541 tataattgga tggtgttgat gctgaagatc tgatatgcat atgcacaaag ctgtgagtac
      601 agattctgtt aactatgcag caatctgtga agtattctgc cacttgatgt gtttgttttg
      661 cttttaatac attgggccta catgctttag ttgcatatat ataataataa ttaaaaatta
      721 acaaagatac tttcaagcat gatttttctt tgtttgcttt tgttttagtt gcatataggt
      781 atatgttcaa attcaatttg gagaacgatg tgattattgg agagacaaca tgaggatgat
      841 gttgataaaa tttattccat ttatgacaag gttgctcgca tctctgttgt ggttgcctgg
      901 ttggttagct tctgcagcag aagcggttgt tacaacccta tgatattaca acgaaatttt
      961 aacattaatt atttgacagt gaagaaaatg tcaacgagtt tgagagttat ttgtgtaggt
     1021 atgtatgttc caccatatga ttgagattaa cagaacgaat agtgatttat gtttgttttt
     1081 tcacgattgc ttaagacaat gttttagata tggaggtacg acttaatgaa tgatgtccgt
     1141 gcgggctaat ttttgtacct tttgaactat catcttctat taagagatac ttgtaggtta
     1201 tttcttatat gcaaaaaaca ttcattaagt ttataactgt ttttgtatta taatagagaa
     1261 gggtctaata caatttttga gtctgaagca tggaccatac aacttgattt tggggatcaa
     1321 agacaacaaa gattgattgg tgtcacaatg ggtcacatat caaatgaaga atagaggtgc
     1381 aggtgtatgt tcgtttcaag aggttgtggt atgcaatttt gagtgtatgg aaaacataac
     1441 gaaaaaatag attatagtat aaagtgggta tgtaggtaat cttggctttt aaacccatgt
     1501 acttattgtg atgagtaagg gtgttttcaa ggttgggtta cctcctctac aacctgagtt
     1561 ttaatgcccc agctattagt tagtattagt taagtactct ggatagtcct cttgtgttga
     1621 aatttgagta gtcaatttgg gttgagttat tatgtgtaaa gtgggtatgc atgcgtgcat
     1681 actatttgta tcatcattgt tatatattaa taaagttt
//
LOCUS       XR_011778747            1542 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X4, ncRNA.
ACCESSION   XR_011778747
VERSION     XR_011778747.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1542
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1542
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 tgttctttta tagcttatgt ttaaatgttt aattacatta gcttttccac atttcatatt
       61 catacatgtg ttgattgaaa agattttctt cctcttagaa gaaattgttc tgctgatgtt
      121 cattagtgct ccctcttttt atttactttg gatgtcaaga tcaaggttgc tgcaagaatt
      181 tgaatttaaa ttgattacca tcattgtcat ctctttctca ttatgtataa tattcactca
      241 ttctttgatt gcgatttttg aagttttctt tatgcacaca atgtgttcca tgttatatca
      301 ataacaagta gcttttatat tttgtcagta tgtaatatgt tattgacttc atatattttg
      361 aaagaatagg ttgttgaaat catgagttga gttaaatgta tgtgcttatc atggagtttt
      421 tcatctagat ccaacaaatg aaatgggtga tccatcttgc cagtaggtag atgcagaaag
      481 aatggagaaa aatgattata gatatgtaat tgaacaaata agaagtattt ccaaatttta
      541 tataattgga tggtgttgat gctgaagatc tgatatgcat atgcacaaag ctttgcatat
      601 aggtatatgt tcaaattcaa tttggagaac gatgtgatta ttggagagac aacatgagga
      661 tgatgttgat aaaatttatt ccatttatga caaggttgct cgcatctctg ttgtggttgc
      721 ctggttggtt agcttctgca gcagaagcgg ttgttacaac cctatgatat tacaacgaaa
      781 ttttaacatt aattatttga cagtgaagaa aatgtcaacg agtttgagag ttatttgtgt
      841 aggtatgtat gttccaccat atgattgaga ttaacagaac gaatagtgat ttatgtttgt
      901 tttttcacga ttgcttaaga caatgtttta gatatggagg tacgacttaa tgaatgatgt
      961 ccgtgcgggc taatttttgt accttttgaa ctatcatctt ctattaagag atacttgtag
     1021 gttatttctt atatgcaaaa aacattcatt aagtttataa ctgtttttgt attataatag
     1081 agaagggtct aatacaattt ttgagtctga agcatggacc atacaacttg attttgggga
     1141 tcaaagacaa caaagattga ttggtgtcac aatgggtcac atatcaaatg aagaatagag
     1201 gtgcaggtgt atgttcgttt caagaggttg tggtatgcaa ttttgagtgt atggaaaaca
     1261 taacgaaaaa atagattata gtataaagtg ggtatgtagg taatcttggc ttttaaaccc
     1321 atgtacttat tgtgatgagt aagggtgttt tcaaggttgg gttacctcct ctacaacctg
     1381 agttttaatg ccccagctat tagttagtat tagttaagta ctctggatag tcctcttgtg
     1441 ttgaaatttg agtagtcaat ttgggttgag ttattatgtg taaagtgggt atgcatgcgt
     1501 gcatactatt tgtatcatca ttgttatata ttaataaagt tt
//
LOCUS       XR_011778748            1643 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X5, ncRNA.
ACCESSION   XR_011778748
VERSION     XR_011778748.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1643
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1643
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 attttataaa ggttgggttt cttcacgttt atttctcata ctttcatgtt tttacctatc
       61 tgattagcag atctaaactg aaaatctgat acgtttttaa cttaatggca tgaagaagaa
      121 actgaagaaa aatgcatatc caacaaatga aatgggtgat ccatcttgcc agtaggtaga
      181 tgcagaaaga atggagaaaa atgattatag atatgtaatt gaacaagtaa ctctctgttt
      241 atcatttact ttgtcaatcc tatatgtatc tttttttttc ttcatataaa tatgtaattt
      301 actgactgtc ttacgtatgt aattgaatct agggttttgg ttttagatta agctaatact
      361 tgaatatgtt agggtttagc cattgatttt tctgatcgat gtaataagtt aattattaat
      421 gtgtgttttg tatgtggaac agataagaag tatttccaaa ttttatataa ttggatggtg
      481 ttgatgctga agatctgata tgcatatgca caaagctgtg agtacagatt ctgttaacta
      541 tgcagcaatc tgtgaagtat tctgccactt gatgtgtttg ttttgctttt aatacattgg
      601 gcctacatgc tttagttgca tatatataat aataattaaa aattaacaaa gatactttca
      661 agcatgattt ttctttgttt gcttttgttt tagttgcata taggtatatg ttcaaattca
      721 atttggagaa cgatgtgatt attggagaga caacatgagg atgatgttga taaaatttat
      781 tccatttatg acaaggttgc tcgcatctct gttgtggttg cctggttggt tagcttctgc
      841 agcagaagcg gttgttacaa ccctatgata ttacaacgaa attttaacat taattatttg
      901 acagtgaaga aaatgtcaac gagtttgaga gttatttgtg taggtatgta tgttccacca
      961 tatgattgag attaacagaa cgaatagtga tttatgtttg ttttttcacg attgcttaag
     1021 acaatgtttt agatatggag gtacgactta atgaatgatg tccgtgcggg ctaatttttg
     1081 taccttttga actatcatct tctattaaga gatacttgta ggttatttct tatatgcaaa
     1141 aaacattcat taagtttata actgtttttg tattataata gagaagggtc taatacaatt
     1201 tttgagtctg aagcatggac catacaactt gattttgggg atcaaagaca acaaagattg
     1261 attggtgtca caatgggtca catatcaaat gaagaataga ggtgcaggtg tatgttcgtt
     1321 tcaagaggtt gtggtatgca attttgagtg tatggaaaac ataacgaaaa aatagattat
     1381 agtataaagt gggtatgtag gtaatcttgg cttttaaacc catgtactta ttgtgatgag
     1441 taagggtgtt ttcaaggttg ggttacctcc tctacaacct gagttttaat gccccagcta
     1501 ttagttagta ttagttaagt actctggata gtcctcttgt gttgaaattt gagtagtcaa
     1561 tttgggttga gttattatgt gtaaagtggg tatgcatgcg tgcatactat ttgtatcatc
     1621 attgttatat attaataaag ttt
//
LOCUS       XR_011778749            1427 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X6, ncRNA.
ACCESSION   XR_011778749
VERSION     XR_011778749.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1427
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1427
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 attttataaa ggttgggttt cttcacgttt atttctcata ctttcatgtt tttacctatc
       61 tgattagcag atctaaactg aaaatctgat acgtttttaa cttaatggca tgaagaagaa
      121 actgaagaaa aatgcatatc caacaaatga aatgggtgat ccatcttgcc agtaggtaga
      181 tgcagaaaga atggagaaaa atgattatag atatgtaatt gaacaaataa gaagtatttc
      241 caaattttat ataattggat ggtgttgatg ctgaagatct gatatgcata tgcacaaagc
      301 tgtgagtaca gattctgtta actatgcagc aatctgtgaa gtattctgcc acttgatgtg
      361 tttgttttgc ttttaataca ttgggcctac atgctttagt tgcatatata taataataat
      421 taaaaattaa caaagatact ttcaagcatg atttttcttt gtttgctttt gttttagttg
      481 catataggta tatgttcaaa ttcaatttgg agaacgatgt gattattgga gagacaacat
      541 gaggatgatg ttgataaaat ttattccatt tatgacaagg ttgctcgcat ctctgttgtg
      601 gttgcctggt tggttagctt ctgcagcaga agcggttgtt acaaccctat gatattacaa
      661 cgaaatttta acattaatta tttgacagtg aagaaaatgt caacgagttt gagagttatt
      721 tgtgtaggta tgtatgttcc accatatgat tgagattaac agaacgaata gtgatttatg
      781 tttgtttttt cacgattgct taagacaatg ttttagatat ggaggtacga cttaatgaat
      841 gatgtccgtg cgggctaatt tttgtacctt ttgaactatc atcttctatt aagagatact
      901 tgtaggttat ttcttatatg caaaaaacat tcattaagtt tataactgtt tttgtattat
      961 aatagagaag ggtctaatac aatttttgag tctgaagcat ggaccataca acttgatttt
     1021 ggggatcaaa gacaacaaag attgattggt gtcacaatgg gtcacatatc aaatgaagaa
     1081 tagaggtgca ggtgtatgtt cgtttcaaga ggttgtggta tgcaattttg agtgtatgga
     1141 aaacataacg aaaaaataga ttatagtata aagtgggtat gtaggtaatc ttggctttta
     1201 aacccatgta cttattgtga tgagtaaggg tgttttcaag gttgggttac ctcctctaca
     1261 acctgagttt taatgcccca gctattagtt agtattagtt aagtactctg gatagtcctc
     1321 ttgtgttgaa atttgagtag tcaatttggg ttgagttatt atgtgtaaag tgggtatgca
     1381 tgcgtgcata ctatttgtat catcattgtt atatattaat aaagttt
//
LOCUS       XR_011778750            1122 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X7, ncRNA.
ACCESSION   XR_011778750
VERSION     XR_011778750.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1122
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1122
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 ttctcctttt aaattcttca tctgcttttc tttcatcacc atcaaaagat tctccaataa
       61 atttattgat gatgcacgcg aaggtgattt tataaagata agaagtattt ccaaatttta
      121 tataattgga tggtgttgat gctgaagatc tgatatgcat atgcacaaag ctttgcatat
      181 aggtatatgt tcaaattcaa tttggagaac gatgtgatta ttggagagac aacatgagga
      241 tgatgttgat aaaatttatt ccatttatga caaggttgct cgcatctctg ttgtggttgc
      301 ctggttggtt agcttctgca gcagaagcgg ttgttacaac cctatgatat tacaacgaaa
      361 ttttaacatt aattatttga cagtgaagaa aatgtcaacg agtttgagag ttatttgtgt
      421 aggtatgtat gttccaccat atgattgaga ttaacagaac gaatagtgat ttatgtttgt
      481 tttttcacga ttgcttaaga caatgtttta gatatggagg tacgacttaa tgaatgatgt
      541 ccgtgcgggc taatttttgt accttttgaa ctatcatctt ctattaagag atacttgtag
      601 gttatttctt atatgcaaaa aacattcatt aagtttataa ctgtttttgt attataatag
      661 agaagggtct aatacaattt ttgagtctga agcatggacc atacaacttg attttgggga
      721 tcaaagacaa caaagattga ttggtgtcac aatgggtcac atatcaaatg aagaatagag
      781 gtgcaggtgt atgttcgttt caagaggttg tggtatgcaa ttttgagtgt atggaaaaca
      841 taacgaaaaa atagattata gtataaagtg ggtatgtagg taatcttggc ttttaaaccc
      901 atgtacttat tgtgatgagt aagggtgttt tcaaggttgg gttacctcct ctacaacctg
      961 agttttaatg ccccagctat tagttagtat tagttaagta ctctggatag tcctcttgtg
     1021 ttgaaatttg agtagtcaat ttgggttgag ttattatgtg taaagtgggt atgcatgcgt
     1081 gcatactatt tgtatcatca ttgttatata ttaataaagt tt
//
LOCUS       XR_011778751            1044 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X8, ncRNA.
ACCESSION   XR_011778751
VERSION     XR_011778751.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1044
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1044
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 aaactgaaga aaaatgcata taagaagtat ttccaaattt tatataattg gatggtgttg
       61 atgctgaaga tctgatatgc atatgcacaa agctttgcat ataggtatat gttcaaattc
      121 aatttggaga acgatgtgat tattggagag acaacatgag gatgatgttg ataaaattta
      181 ttccatttat gacaaggttg ctcgcatctc tgttgtggtt gcctggttgg ttagcttctg
      241 cagcagaagc ggttgttaca accctatgat attacaacga aattttaaca ttaattattt
      301 gacagtgaag aaaatgtcaa cgagtttgag agttatttgt gtaggtatgt atgttccacc
      361 atatgattga gattaacaga acgaatagtg atttatgttt gttttttcac gattgcttaa
      421 gacaatgttt tagatatgga ggtacgactt aatgaatgat gtccgtgcgg gctaattttt
      481 gtaccttttg aactatcatc ttctattaag agatacttgt aggttatttc ttatatgcaa
      541 aaaacattca ttaagtttat aactgttttt gtattataat agagaagggt ctaatacaat
      601 ttttgagtct gaagcatgga ccatacaact tgattttggg gatcaaagac aacaaagatt
      661 gattggtgtc acaatgggtc acatatcaaa tgaagaatag aggtgcaggt gtatgttcgt
      721 ttcaagaggt tgtggtatgc aattttgagt gtatggaaaa cataacgaaa aaatagatta
      781 tagtataaag tgggtatgta ggtaatcttg gcttttaaac ccatgtactt attgtgatga
      841 gtaagggtgt tttcaaggtt gggttacctc ctctacaacc tgagttttaa tgccccagct
      901 attagttagt attagttaag tactctggat agtcctcttg tgttgaaatt tgagtagtca
      961 atttgggttg agttattatg tgtaaagtgg gtatgcatgc gtgcatacta tttgtatcat
     1021 cattgttata tattaataaa gttt
//
LOCUS       XR_011778752             973 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X9, ncRNA.
ACCESSION   XR_011778752
VERSION     XR_011778752.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..973
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..973
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 gaagaaactg aagaaaaatg catttgcata taggtatatg ttcaaattca atttggagaa
       61 cgatgtgatt attggagaga caacatgagg atgatgttga taaaatttat tccatttatg
      121 acaaggttgc tcgcatctct gttgtggttg cctggttggt tagcttctgc agcagaagcg
      181 gttgttacaa ccctatgata ttacaacgaa attttaacat taattatttg acagtgaaga
      241 aaatgtcaac gagtttgaga gttatttgtg taggtatgta tgttccacca tatgattgag
      301 attaacagaa cgaatagtga tttatgtttg ttttttcacg attgcttaag acaatgtttt
      361 agatatggag gtacgactta atgaatgatg tccgtgcggg ctaatttttg taccttttga
      421 actatcatct tctattaaga gatacttgta ggttatttct tatatgcaaa aaacattcat
      481 taagtttata actgtttttg tattataata gagaagggtc taatacaatt tttgagtctg
      541 aagcatggac catacaactt gattttgggg atcaaagaca acaaagattg attggtgtca
      601 caatgggtca catatcaaat gaagaataga ggtgcaggtg tatgttcgtt tcaagaggtt
      661 gtggtatgca attttgagtg tatggaaaac ataacgaaaa aatagattat agtataaagt
      721 gggtatgtag gtaatcttgg cttttaaacc catgtactta ttgtgatgag taagggtgtt
      781 ttcaaggttg ggttacctcc tctacaacct gagttttaat gccccagcta ttagttagta
      841 ttagttaagt actctggata gtcctcttgt gttgaaattt gagtagtcaa tttgggttga
      901 gttattatgt gtaaagtggg tatgcatgcg tgcatactat ttgtatcatc attgttatat
      961 attaataaag ttt
//
LOCUS       XR_011778753            1017 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X10, ncRNA.
ACCESSION   XR_011778753
VERSION     XR_011778753.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1017
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1017
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 tttcatcacc atcaaaagat tctccaataa atttattgat gatgcacgcg aaggtgattt
       61 tataaagttg catataggta tatgttcaaa ttcaatttgg agaacgatgt gattattgga
      121 gagacaacat gaggatgatg ttgataaaat ttattccatt tatgacaagg ttgctcgcat
      181 ctctgttgtg gttgcctggt tggttagctt ctgcagcaga agcggttgtt acaaccctat
      241 gatattacaa cgaaatttta acattaatta tttgacagtg aagaaaatgt caacgagttt
      301 gagagttatt tgtgtaggta tgtatgttcc accatatgat tgagattaac agaacgaata
      361 gtgatttatg tttgtttttt cacgattgct taagacaatg ttttagatat ggaggtacga
      421 cttaatgaat gatgtccgtg cgggctaatt tttgtacctt ttgaactatc atcttctatt
      481 aagagatact tgtaggttat ttcttatatg caaaaaacat tcattaagtt tataactgtt
      541 tttgtattat aatagagaag ggtctaatac aatttttgag tctgaagcat ggaccataca
      601 acttgatttt ggggatcaaa gacaacaaag attgattggt gtcacaatgg gtcacatatc
      661 aaatgaagaa tagaggtgca ggtgtatgtt cgtttcaaga ggttgtggta tgcaattttg
      721 agtgtatgga aaacataacg aaaaaataga ttatagtata aagtgggtat gtaggtaatc
      781 ttggctttta aacccatgta cttattgtga tgagtaaggg tgttttcaag gttgggttac
      841 ctcctctaca acctgagttt taatgcccca gctattagtt agtattagtt aagtactctg
      901 gatagtcctc ttgtgttgaa atttgagtag tcaatttggg ttgagttatt atgtgtaaag
      961 tgggtatgca tgcgtgcata ctatttgtat catcattgtt atatattaat aaagttt
//
LOCUS       XR_011778754            1696 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904359), transcript variant X11, ncRNA.
ACCESSION   XR_011778754
VERSION     XR_011778754.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1696
                     /gene="LOC139904359"
                     /note="uncharacterized LOC139904359; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904359"
     ncRNA           1..1696
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904359"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /db_xref="GeneID:139904359"
ORIGIN      
        1 tgttctttta tagcttatgt ttaaatgttt aattacatta gcttttccac atttcatatt
       61 catacatgtg ttgattgaaa agattttctt cctcttagaa gaaattgttc tgctgatgtt
      121 cattagtgct ccctcttttt atttactttg gatgtcaaga tcaaggttgc tgcaagaatt
      181 tgaatttaaa ttgattacca tcattgtcat ctctttctca ttatgtataa tattcactca
      241 ttctttgatt gcgatttttg aagttttctt tatgcacaca atgtgttcca tgttatatca
      301 ataacaagta gcttttatat tttgtcagta tgtaatatgt tattgacttc atatattttg
      361 aaagaatagg ttgttgaaat catgagttga gttaaatgta tgtgcttatc atggagtttt
      421 tcatctagat ccaacaaatg aaatgggtga tccatcttgc cagtaggtag atgcagaaag
      481 aatggagaaa aatgattata gatatgtaat tgaacaagta actctctgtt tatcatttac
      541 tttgtcaatc ctatatgtat cttttttttt cttcatataa atatgtaatt tactgactgt
      601 cttacgtatg taattgaatc tagggttttg gttttagatt aagctaatac ttgaatatgt
      661 tagggtttag ccattgattt ttctgatcga tgtaataagt taattattaa tgtgtgtttt
      721 gtatgtggaa cagataagaa gtatttccaa attttatata attggatggt gttgatgctg
      781 aagatctgat atgcatatgc acaaagctgt gagtacagat tctgttaact atgcagcaat
      841 ctgtgaagta ttctgccact tgatgtgttt gttttgcttt taatacattg ggcctacatg
      901 ctttagttgc atatatataa taataattaa aaattaacaa agatactttc aagcatgatt
      961 tttctttgtt tgcttttgtt ttagttgcat ataggtatat gttcaaattc aatttggaga
     1021 acgatgtgat tattggagag acaacatgag gatgatgttg ataaaattta ttccatttat
     1081 gacaaggttg ctcgcatctc tgttgtggtt gcctggttgg ttagcttctg cagcagaagc
     1141 ggttgttaca accctatgat attacaacga aattttaaca ttaattattt gacagtgaag
     1201 aaaatgtcaa cgagtttgag agttatttgt gtagagaagg gtctaataca atttttgagt
     1261 ctgaagcatg gaccatacaa cttgattttg gggatcaaag acaacaaaga ttgattggtg
     1321 tcacaatggg tcacatatca aatgaagaat agaggtgcag gtgtatgttc gtttcaagag
     1381 gttgtggtat gcaattttga gtgtatggaa aacataacga aaaaatagat tatagtataa
     1441 agtgggtatg taggtaatct tggcttttaa acccatgtac ttattgtgat gagtaagggt
     1501 gttttcaagg ttgggttacc tcctctacaa cctgagtttt aatgccccag ctattagtta
     1561 gtattagtta agtactctgg atagtcctct tgtgttgaaa tttgagtagt caatttgggt
     1621 tgagttatta tgtgtaaagt gggtatgcat gcgtgcatac tatttgtatc atcattgtta
     1681 tatattaata aagttt
//
LOCUS       XM_071886297            1106 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides telomere repeat-binding
            factor 4-like (LOC139904360), mRNA.
ACCESSION   XM_071886297
VERSION     XM_071886297.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1106
                     /gene="LOC139904360"
                     /note="telomere repeat-binding factor 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139904360"
     CDS             84..914
                     /gene="LOC139904360"
                     /codon_start=1
                     /product="telomere repeat-binding factor 4-like"
                     /protein_id="XP_071742398.1"
                     /db_xref="GeneID:139904360"
                     /translation="MGNPKQKWTAEEEEALRAGIAKHGTGKWKNIQKDPEFNHLLYSR
                     SNIDLKDKWRNMSVSVNGQGPREKSRTPKAKSSTNSPCMPIAQTPGSLAAVVVDPSST
                     TDVHMDDASKCLLNASKYDAMIYEALSTLKNPNGSDTSAIVSFFEKRQEVPVKFRRLL
                     NSRLRRLVALDKLEKVQNCYRLRKEVHNGTKGPVQKPKEIQPRIYPINSHLGETLEEA
                     AVAAAYKVAEAENKLFVAAEAVKEAERVSRMAEEAEAFLHLVEEIYERCSHGEVVMVQ
                     "
     misc_feature    99..251
                     /gene="LOC139904360"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; Region: SANT_TRF;
                     cd11660"
                     /db_xref="CDD:212558"
     misc_feature    order(99..107,159..161,165..170,213..215,219..227,
                     231..239,243..248)
                     /gene="LOC139904360"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     misc_feature    438..617
                     /gene="LOC139904360"
                     /note="linker histone 1 and histone 5 domains; the basic
                     subunit of chromatin is the nucleosome, consisting of an
                     octamer of core histones, two full turns of DNA, a linker
                     histone (H1 or H5) and a variable length of linker DNA;
                     H1/H5 are chromatin-associated...; Region: H15; cl00073"
                     /db_xref="CDD:469603"
     polyA_site      1106
                     /gene="LOC139904360"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catcacctct aattatttct agggcttaag atcacccaaa aaaaatacca gttaaaatta
       61 cagtcggcga cggctaataa gcgatgggga atccaaaaca aaagtggacg gcggaggaag
      121 aagaagcctt acgcgccggc atcgcaaaac atggcaccgg caaatggaaa aacatccaaa
      181 aagatcccga atttaaccac ttactctatt ctcgttccaa tatcgatctt aaggataaat
      241 ggcggaatat gagtgtaagt gtgaatggtc aaggtccaag ggaaaaatca agaacaccga
      301 aagcaaaaag tagcacaaat tctccttgta tgcccattgc acaaacccct ggctccttag
      361 cggcagttgt agttgatcca tcatctacta ctgatgtgca tatggatgat gcttcaaaat
      421 gcttacttaa cgcatcaaag tatgatgcaa tgatttatga agcattgtca acattgaaga
      481 atccaaatgg atcagatact agtgcaattg ttagtttctt tgagaagagg caagaggtgc
      541 ccgtcaagtt tagaaggtta ttaaattcaa ggttacgaag gcttgttgct ctagataaac
      601 ttgagaaggt tcaaaactgc tatcgacttc gaaaggaggt gcataatgga accaagggcc
      661 cggtccagaa acccaaagag atacagccca ggatatatcc aataaacagt catcttggtg
      721 aaacattaga agaagctgca gttgctgctg catataaagt tgcagaagca gaaaataagt
      781 tgtttgttgc agcagaagct gtgaaagaag ccgaaagggt ctcaagaatg gctgaagagg
      841 ctgaagcttt cctacatcta gtcgaagaga tatatgagag atgttcgcat ggtgaagtgg
      901 tgatggtgca atgacgtgtg tgtgaaaggt gttaatcgtt aggtagccta ttacaataca
      961 tatgaaggtg gtaggcttat attgtataat atctatgttc attctaaagt cttcttgatg
     1021 ttgaataaat ggttcagact ctaaaatgtc tgctgtgaaa atgtgatttt tttgtagcta
     1081 tttatgcata tttttttctg ttttta
//
LOCUS       XM_071886298            1757 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ANTAGONIST OF LIKE
            HETEROCHROMATIN PROTEIN 1-like (LOC139904361), mRNA.
ACCESSION   XM_071886298
VERSION     XM_071886298.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1757
                     /gene="LOC139904361"
                     /note="protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139904361"
     CDS             144..1559
                     /gene="LOC139904361"
                     /codon_start=1
                     /product="protein ANTAGONIST OF LIKE HETEROCHROMATIN
                     PROTEIN 1-like"
                     /protein_id="XP_071742399.1"
                     /db_xref="GeneID:139904361"
                     /translation="MEISSLNQEDYSYFYTFFQDFDNNNTNNNIATTTDVLPIPIDNK
                     RRKLDDENNSLKQILNTISFADHNQATFTSNFDFEFQAPTSNFESEMADSERSRARKT
                     PPPKFDAVEEASSSHGGGQRRLWVKERSKGWWEYYNSDECPDEEFKREFRMSKTTFTM
                     ICDELDSVVTKKDTMLRMAIPVRQRVAVCLYRLATGDPLRTVSGKFGLGISTCHKLVL
                     EVCAAIRTVLMPKYLQWPDHERLHNIKTEFRSISGLPDVSGSIYTTHISIIAPKVSPA
                     AYFNKKHTDRNQKPSYSTTVQGVVDPHGVFTDICIGYPGSMSDDKILEKSALSHRFSN
                     GHLRNTRIVANSAYPLLDWLLVPYTHQNHTWSQHLFNERIGDVQNVAKDAFIRLKGRW
                     ACLQKRTEVKLQELPVVLGACCVLHNICEINNETMDDNLRFDLFDDEIPFVENGITNS
                     LNSVQDRDTIAQNLLHRSHES"
     misc_feature    924..1397
                     /gene="LOC139904361"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
     polyA_site      1757
                     /gene="LOC139904361"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcattcaga ttcatctctt cgatcaattt ttccgttttc ttcttcttca caccttcaaa
       61 attcagattt ccttttcaca ctcacttgtt atatttatat tgccttatta ttatataata
      121 tcaatcattc aattaatcta ttaatggaaa tcagttcatt aaaccaagaa gactactctt
      181 acttctacac cttctttcag gatttcgaca acaataacac caacaacaac atcgcaacta
      241 ctaccgacgt ccttcctatt ccaatcgaca ataaacgtcg aaaacttgat gatgaaaaca
      301 actcattaaa acaaattctc aacacgatct cgtttgctga tcataatcag gctactttca
      361 cttccaattt tgactttgaa tttcaagcac cgacttccaa ttttgaatcg gaaatggcgg
      421 attccgagag aagtagagct agaaaaacac caccgccgaa attcgatgcc gttgaggaag
      481 cgagttcaag ccacggtgga ggacaacgga ggttatgggt gaaggaaaga tcaaaagggt
      541 ggtgggagta ttacaatagc gacgaatgtc ctgacgagga gtttaaaaga gaatttcgaa
      601 tgagtaaaac cacttttacc atgatttgtg acgaattgga ttctgtcgtc actaaaaagg
      661 acactatgct tcgtatggcc attccagttc ggcaacgcgt ggcagtgtgc ttgtaccggt
      721 tagcaaccgg tgacccgttg agaactgttt ccggcaaatt cggtttaggc atttcaactt
      781 gccataaatt ggttttagaa gtttgtgctg ctattcggac cgtcttaatg cccaaatacc
      841 tccaatggcc cgatcatgaa cgtctccata atatcaaaac cgaattcagg tcaatttcgg
      901 gcttaccaga tgtctccggc tcaatttaca ctacgcatat ctcaatcatc gcgccaaaag
      961 ttagcccggc tgcatacttt aataagaaac acacggacag aaaccaaaag ccatcctact
     1021 ctactacggt ccaaggtgtg gtagacccac atggcgtctt tacggatata tgcattggct
     1081 atcctggttc gatgtctgac gacaaaatct tggaaaaatc cgctctctca cataggttta
     1141 gcaacggtca tttgaggaat acacgaatag tggctaactc agcttaccca ctgttggact
     1201 ggcttttggt gccgtacacg caccaaaacc atacatggag tcagcattta tttaatgaga
     1261 gaattgggga tgttcaaaac gtagctaaag atgcttttat tagattaaaa gggaggtggg
     1321 catgtttaca gaaaaggaca gaagtcaagc ttcaagaatt gccagtggtt ttaggggcat
     1381 gttgtgtttt gcacaacatt tgtgagatta ataatgagac tatggatgac aatttaaggt
     1441 ttgacttgtt tgatgatgag atcccatttg tggaaaatgg tatcaccaat tcactaaatt
     1501 cagtgcaaga cagagatact attgcacaga atttgttgca ccgtagtcat gaaagctagc
     1561 agtgtttttt gatgttatag tgttacggaa gaacataaat aaatgtaatc ttactcgaaa
     1621 tcaccaattt ttcttgtaaa agatacacgg tagtataaaa tacgtgtttg agattgatat
     1681 aggattgttt atttttctta gagtgatact ttttgtttta aaaattaata atatacggag
     1741 tatgtgcttt gaataaa
//
LOCUS       XR_011778755            1191 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904362), ncRNA.
ACCESSION   XR_011778755
VERSION     XR_011778755.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1191
                     /gene="LOC139904362"
                     /note="uncharacterized LOC139904362; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904362"
     ncRNA           1..1191
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904362"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904362"
ORIGIN      
        1 tcatcattca ttgtccatat tctttctctc atgcgatccc taattcaaaa tcatccgaac
       61 cctaattcaa catcacaaat cctaattcaa aatcacatga ttgaatatgt aatcatcgat
      121 tcagtatgta atttctgatt tcaaatctct gatgctcatc tggacttatg tcgatttcta
      181 cagggactaa tctatatcta catgttcatt tcgatttcta atcggttcga ctaaaattag
      241 gtttttcgtg tgttgtatgt gcagattgat tgaacattca tggtcgatca tatcatcata
      301 tcgatttcaa agttctagag atcttgaact ggcaatggaa ttgtctatgt cacatcttga
      361 actgtaggat gcggacaagc gtatttcgtt gagatctaaa agtgtatttc aatgaaatcg
      421 acccttctgg taggtatgat cgggttagta ttcttatttc ttattaagca tcgaatggct
      481 tattagtgat aatttattaa ataaaaatca tatatgttat cttttgattt tgtgtctaat
      541 ggtgatattg agaaaatttg caagggaatt gatacattat gacaatgtat cattggatta
      601 tgagaatggt aaggtataga tcatcatttg aacagctaaa gtttatgaca tactaacgta
      661 ctctacttat tggtgaatta aatgatggat tattttattc aagtgcaaag catatctcac
      721 ttttaatgtc aagtgtttat gccatcgcca ttatatttac ttatttggtt ttgatttttg
      781 taacatgaat aacgatgata gtttgtctga aaatacaaac tttatctagc acaccaatta
      841 attatttgta tgcatgaacg aaaaaaaatc atatctgcat agcatatttt atcttgattt
      901 ttttgtgaat caaaacattt ctctttactt ttcaggattt caatggtctt ttaacccata
      961 attggatgaa atgtcagctc gtgatgggaa gaaaacttca ttgatgtgaa ggtgatgtcc
     1021 attcgtgttc cagttctatc aattgtatac tgatgtcaat tattcacaac aatgattata
     1081 ttagcaactc aaggagtaaa acttggtagt catgactaat gtgttaatat atactcaata
     1141 catttagtat ttttattttt cagtgggaac acgcgtaaca ttgtttgatt a
//
LOCUS       XR_011778756            1754 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904363), transcript variant X1, misc_RNA.
ACCESSION   XR_011778756
VERSION     XR_011778756.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1754
                     /gene="LOC139904363"
                     /note="uncharacterized LOC139904363; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904363"
     misc_RNA        1..1754
                     /gene="LOC139904363"
                     /product="uncharacterized protein, transcript variant X1"
                     /db_xref="GeneID:139904363"
ORIGIN      
        1 aagcatttca tccgctatca ctaccactaa cacaaatgca gtatcatcaa acgttgataa
       61 ttttaatact catattaatg gaatggacag cagaaatctt gagctgaacc cggaaccatt
      121 actgccaaga acaccgagtc ctcaggatat tcctctctgt cagagacttc tcgctgctct
      181 aattacataa gataacgata acctaagtat taatgtctat ggttccagat ttgagttcga
      241 aatagatgac aaatccaaag tctcgaaaca ctagcaattg caaaacttgg aagttagtgg
      301 acactattct tataatgggc attacataaa ttctgtgcag aagtcctgta aggaacgtgt
      361 acataacctt tcagaaaacc gtatgattcc catgaatgag agactacttc ttgagattca
      421 gagtattgga ctatacccta aactagtgcc tgatctagca gacactgaag gagacatctc
      481 tggggatatc tgtaacctag aaagcatgca ccatgaaaag gttgtcagaa agaaaagttt
      541 gcttgagaaa atgttgaaga ctactactga cgcaagacgg ctccaagaga tggaatatga
      601 acaacattct tttgacgagc tcacaggaat ggcttaccag aagtacatga gtagttggga
      661 ccctactgca cctggaggta agagtgctgg tagcaaagtt accaggcaag ctgctcaagc
      721 ttttgtaaaa cggacattag accgatgtca aaaatttgaa acaactggca aaagctgctt
      781 tagcaagccc ttatttagag aaatgtttct atcggggcca tcacattcca acgagactca
      841 attatgtgcc atgactaatg ccgactctgg tcaactatat gcaaattcca cggaaatagt
      901 ttcaggtaac acaatttaac cttccattga acaatcatga gatttatttt ggtgcaaaag
      961 gaaagaagag tgagagagac aaagaatgga agggaaacaa tggctgctat aaagttgaga
     1021 caaagacaaa aacaaatctc aagcagaaac cgactcaatt atctgcttcc gttagtaaat
     1081 agtggttctc aattcatggt ttcagatcag cataaaccaa cagttgaggt cgatgtgaag
     1141 gaaaataccg aatacgagga accacttgat ttttcgcaac ctgcaaattc ctgatatgga
     1201 tgatgttctt ggagatgatt ttggtgagca agggcaggat ataggttctt ggttaaacat
     1261 tgatgatgac atattacaag atgatgactt tatgtgtctc gagattccaa tggatgattt
     1321 aacagatctg aatatgatgg cttaattaaa gttggttatc atattaggac gtttcagatt
     1381 cggaagtggg ggtatgaaaa gatttggagt ctcatataat aagataagat ttcatctggg
     1441 tttagatcgt gaaggaggta tgagtttttt gattaaaact ggaaaaagca tatttgctac
     1501 tctctctttt attggatgta ggaaatgcaa gtgtatgcca tcagcgttga agtgctgtta
     1561 ttcaaagttt acattatgag gtcattgtta aaccgatgta tgcgttactt tgtagtggat
     1621 gaaagtgaca tctgtatgtg cttcatgcaa ttaggaatag atggcactat gctatccaaa
     1681 atgtaaatgc tttctttgtt cctccatgtt ttaatgtctg cttcacactt attttttacc
     1741 aactgtcaaa cctg
//
LOCUS       XM_071886299            1755 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904363), transcript variant X2, mRNA.
ACCESSION   XM_071886299
VERSION     XM_071886299.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1755
                     /gene="LOC139904363"
                     /note="uncharacterized LOC139904363; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904363"
     CDS             383..919
                     /gene="LOC139904363"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742400.1"
                     /db_xref="GeneID:139904363"
                     /translation="MIPMNERLLLEIQSIGLYPKLVPDLADTEGDISGDICNLESMHH
                     EKVVRKKSLLEKMLKTTTDARRLQEMEYEQHSFDELTGMAYQKYMSSWDPTAPGGKSA
                     GSKVTRQAAQAFVKRTLDRCQKFETTGKSCFSKPLFREMFLSGPSHSNETQLCAMTNA
                     DSGQLYANSTEIVSGNTI"
ORIGIN      
        1 aagcatttca tccgctatca ctaccactaa cacaaatgca gtatcatcaa acgttgataa
       61 ttttaatact catattaatg gaatggacag cagaaatctt gagctgaacc cggaaccatt
      121 actgccaaga acaccgagtc ctcaggatat tcctctctgt cagagacttc tcgctgctct
      181 aattacataa gataacgata acctaagtat taatgtctat ggttccagat ttgagttcga
      241 aatagatgac aaatccaaag tctcgaaaca ctagcaattg caaaacttgg aagttagtgg
      301 acactattct tataatgggc attacataaa ttctgtgcag aagtcctgta aggaacgtgt
      361 acataacctt tcagaaaacc gtatgattcc catgaatgag agactacttc ttgagattca
      421 gagtattgga ctatacccta aactagtgcc tgatctagca gacactgaag gagacatctc
      481 tggggatatc tgtaacctag aaagcatgca ccatgaaaag gttgtcagaa agaaaagttt
      541 gcttgagaaa atgttgaaga ctactactga cgcaagacgg ctccaagaga tggaatatga
      601 acaacattct tttgacgagc tcacaggaat ggcttaccag aagtacatga gtagttggga
      661 ccctactgca cctggaggta agagtgctgg tagcaaagtt accaggcaag ctgctcaagc
      721 ttttgtaaaa cggacattag accgatgtca aaaatttgaa acaactggca aaagctgctt
      781 tagcaagccc ttatttagag aaatgtttct atcggggcca tcacattcca acgagactca
      841 attatgtgcc atgactaatg ccgactctgg tcaactatat gcaaattcca cggaaatagt
      901 ttcaggtaac acaatttaac cttccattga acaatcatga gatttatttt ggtgcaaaag
      961 gaaagaagag tgagagagac aaagaatgga agggaaacaa tggctgctat aaagttgaga
     1021 caaagacaaa aacaaatctc aagcagaaac cgactcaatt atctgcttcc gttagtaaat
     1081 agtggttctc aattcatggt ttcagatcag cataaaccaa cagttgaggt cgatgtgaag
     1141 gaaaataccg aatacgagga accacttgat ttttcgcaac ctgcaaattc ctgatatgga
     1201 tgatgttctt ggagatgatt ttggtgagca agggcaggat ataggttctt ggttaaacat
     1261 tgatgatgac atattacaag atgatgactt tatgtgtctc gagattccaa tggatgattt
     1321 aacagatctg aatatgatgg cttaattaaa gttggttatc atattaggta tagacatctt
     1381 cggcatacaa ctactactta cataatgacg ttcaagtgac tttccgttca gtaattaatt
     1441 agaagactac tacagataga ttcttttcag aacatgtaaa caagttttga gggagggagc
     1501 tctttatata ttttagattt tggtgctagt tttagtgact tggactgtaa aaagcttttt
     1561 tgttttacta gtagtatatc ttaagaaaca ctgcaactgc aactgcaact gccccgtgta
     1621 catacaactt atgtttatac agtggcgatt gtggtaaata gatgtcttgc agttgcagtt
     1681 gcagttgctg cctcctgaat acttgtatct gcaggtatca actttttatc tgtcgcactc
     1741 tattttcgta taatt
//
LOCUS       XM_071886300            2078 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides monolignol oxidoreductase
            AtBBE-like 15 (LOC139904364), mRNA.
ACCESSION   XM_071886300
VERSION     XM_071886300.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2078
                     /gene="LOC139904364"
                     /note="monolignol oxidoreductase AtBBE-like 15; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139904364"
     CDS             31..1719
                     /gene="LOC139904364"
                     /codon_start=1
                     /product="monolignol oxidoreductase AtBBE-like 15"
                     /protein_id="XP_071742401.1"
                     /db_xref="GeneID:139904364"
                     /translation="MNLKMSCYFSNTLVLLLLLLASLSIFCSSNPIQDSFHQCLSQLD
                     TQSFTQLPNLFFTPNNTSFIPILNSTAQNLRCVASYAAKPELIFTPLQETHIQTAVVC
                     AKKLGVQLRFRSGGHDYEGLSYTSVMDPPYVVIDLAKLRAIDVNLEDNSVWVEAGATV
                     GELYYRVAEKSKTHGIPAGLCTSLGVGGHITGGAYGSMMRKYGLAADNALDAKIIDAN
                     GRILDRKAMGEDVFWAIRGGGGGSYGVIVSWKLKLVPVPETVTTFNVGRTLEEGATSI
                     LYKWQQVAADKLDDDLFIRVMISTSSVPNTTQRTISTTYNALFLGDVGKLQEIMQQNF
                     PELGLKKEDCFEMTWLESVLFIAGYPRTVPTSVLLAAKPAFLNYFKAKSDFVTKPIPE
                     KGLEGIWERFLEEESPLMIWNPYGGMMARIPESSIPFPHRNGILFKIQYVSSWMNPEK
                     EVMNKHVDWIRKLYNYMAQYVSMFPRQAYVNYRDLDLGMNDKDGSDTSFVKASSWGTR
                     YFKDNFNRLVKIKTEFDPDNFFKHEQSIPVLPLKGNIQRFKHWKRGKGKKKIHH"
     misc_feature    268..>849
                     /gene="LOC139904364"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; Region: GlcD;
                     COG0277"
                     /db_xref="CDD:440046"
     misc_feature    1462..1641
                     /gene="LOC139904364"
                     /note="Berberine and berberine like; Region: BBE;
                     pfam08031"
                     /db_xref="CDD:369658"
ORIGIN      
        1 caaactgatc aattaatact aataaacttt atgaatctca aaatgagttg ctacttttca
       61 aacacactcg tgcttctact cttgctgcta gcatcacttt caatcttttg ttcttcaaat
      121 ccaattcaag atagcttcca tcaatgtctt tctcagcttg atacgcaatc tttcactcaa
      181 cttcccaact tatttttcac cccaaacaac acttctttca tacccatttt aaactcaacc
      241 gcccaaaatc tccggtgcgt cgcctcctat gcagctaaac ctgagcttat tttcactcca
      301 ttacaggaaa cccatatcca aactgcggtt gtatgtgcca aaaagctggg agttcagctt
      361 aggtttagaa gtggaggcca tgattatgaa gggctctctt atacatccgt tatggaccct
      421 ccttacgtcg ttatagactt agccaaacta cgtgccattg acgttaacct tgaagataat
      481 tcggtttggg ttgaagctgg tgcaaccgtt ggcgagcttt actatcgagt tgcagagaaa
      541 agcaagactc atgggatccc agctggtcta tgcaccagtc taggagttgg tggtcacatc
      601 acgggtggtg cgtatggttc catgatgaga aaatacggtc tagctgccga caatgcgctc
      661 gatgcgaaga tcattgatgc aaatggtcga attttggatc gaaaagcaat gggtgaagat
      721 gttttttggg ctattcgtgg aggtggcggg ggcagttacg gagttatagt ttcttggaaa
      781 ctaaaactcg tccctgtccc tgaaaccgtc acgactttta atgtcggaag gacattagaa
      841 gaaggtgcca ccagtatact ttacaagtgg caacaagttg cagctgacaa acttgatgat
      901 gatcttttca ttagggttat gatttcaacc tcaagtgtac caaacacaac tcaaagaaca
      961 ataagtacaa cttacaatgc cctgtttctt ggagatgtgg gtaaacttca agaaatcatg
     1021 caacaaaact tccctgaatt gggtttgaaa aaagaagatt gctttgaaat gacttggttg
     1081 gaatccgtcc tgttcatcgc cggttacccc agaaccgttc cgacaagcgt tctacttgcc
     1141 gcgaaacctg ctttcttgaa ctactttaag gcaaaatcag attttgtaac gaaaccaatt
     1201 ccagaaaagg gattagaagg aatctgggaa agattcttgg aagaagaaag tccattaatg
     1261 atatggaatc cgtacggtgg gatgatggct aggattccag aatcatcaat tccatttcct
     1321 catagaaatg gtatactttt caagatacag tatgtcagta gttggatgaa ccctgaaaaa
     1381 gaagtcatga acaaacatgt tgattggatt aggaagctgt ataattatat ggctcaatat
     1441 gtttccatgt ttccaagaca agcttatgta aactatagag atcttgatct tggaatgaat
     1501 gataaagatg gtagtgacac aagttttgtg aaagcaagtt catgggggac aaggtatttc
     1561 aaggacaact tcaataggtt ggtgaagatt aaaactgagt ttgatcctga taatttcttc
     1621 aagcatgaac agagtatccc agttttaccc ttaaaaggta acattcaaag attcaaacat
     1681 tggaagaggg gaaagggtaa aaagaaaatc caccattaat taattaatta aaaaggattg
     1741 ggataaagaa gtatggagca gtatggtgga ataagctaaa gttatacgta gtattattta
     1801 tggaatatat ttgtcatgtt caagagtgag tgtgcttgtc gtagtgatta tatattttta
     1861 ggataagact ttgagaatta ataatatttg taaaatttga tgatgtgcaa cactgttatt
     1921 attggttaat gatgtgactg gtattatgct cgctttcttg atacatgttg catattcaac
     1981 taaataggcg tggtataatg gagatttgtg tgtgtgatca ccaatatata ctgatggttg
     2041 ttgaactaac atagatgttt tctagtaatt ggatatgt
//
LOCUS       XM_071886301            1510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitogen-activated protein
            kinase kinase SIPKK-like (LOC139904365), mRNA.
ACCESSION   XM_071886301
VERSION     XM_071886301.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1510
                     /gene="LOC139904365"
                     /note="mitogen-activated protein kinase kinase SIPKK-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 23 Proteins"
                     /db_xref="GeneID:139904365"
     CDS             178..1242
                     /gene="LOC139904365"
                     /codon_start=1
                     /product="mitogen-activated protein kinase kinase
                     SIPKK-like"
                     /protein_id="XP_071742402.1"
                     /db_xref="GeneID:139904365"
                     /translation="MKKGSLAPILKLNLPPPDETSLAKFLTESGTFMDGDLLVNRDGV
                     RIVSQTQSDTPPLIQPSDNQLSLADFDAVKVVGKGNGGIVRLVQHKWTGQFFALKVIQ
                     MNVEESARKQIAQELKINQSSQCTNVVVCYQSFYDNGAVSIILEYMDGGSLADFLKTV
                     GSIPEHYLAAICKQVLKGLWYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAILA
                     STSGLANTFVGTYNYMSPERIIGGNYGYKSDIWSLGLVLLECATGQFPYSPPQPGEGW
                     VNVYELMETIVGQPPPRAPSHQFSPQFCSFIEACVQKDPKDRASANELMSHPFITMFD
                     HMPVDLASYFTEAGSPLATL"
     misc_feature    379..1179
                     /gene="LOC139904365"
                     /note="Catalytic domain of Plant dual-specificity
                     Mitogen-Activated Protein Kinase Kinases and similar
                     proteins; Region: PKc_MAPKK_plant_like; cd06623"
                     /db_xref="CDD:132954"
     misc_feature    order(403..417,427..429,466..468,472..474,562..564,
                     610..621,628..633,640..642,751..753,757..768,772..774,
                     802..807,814..816,856..867,871..873,952..954,979..981)
                     /gene="LOC139904365"
                     /note="active site"
                     /db_xref="CDD:132954"
     misc_feature    order(403..417,421..423,427..429,466..468,472..474,
                     562..564,610..621,628..633,637..642,757..759,763..768,
                     772..774,805..807)
                     /gene="LOC139904365"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:132954"
     misc_feature    order(412..417,751..753,757..765,814..816,856..867,
                     871..873,952..954,979..981)
                     /gene="LOC139904365"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:132954"
     misc_feature    order(802..846,853..873)
                     /gene="LOC139904365"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:132954"
ORIGIN      
        1 cgtattttga tttaaaatag tacggcaaaa ttgttgtatg ttgtgggaaa ccctctggct
       61 tcaattgggg aagacgactt cccaaagact tttcacaatt tcaatttcaa tttcaataca
      121 aaaacaaaca aacaaacatt gaattgaatt gaattgaatc cttccttatt cggcatcatg
      181 aagaagggaa gtttggcacc tattctcaag cttaatcttc cacctcctga tgaaacttca
      241 cttgctaaat ttttaactga atctgggacc tttatggatg gtgatctgct agtgaataga
      301 gatggtgttc gaattgtttc tcaaacccaa tctgatactc cacctcttat tcagccatcg
      361 gacaaccagt taagcttagc cgattttgat gcggttaaag tagtaggaaa gggaaatggt
      421 ggaatagttc gtttggtgca gcacaagtgg actggccagt tttttgcttt gaaggtgatt
      481 caaatgaatg tggaagagtc ggcccgcaag caaattgcac aagaacttaa aatcaaccaa
      541 tcgtcacagt gtacaaacgt tgttgtgtgc taccaatcat tctatgataa cggtgctgtt
      601 tctataatct tggagtacat ggatggagga tcattggctg attttctcaa aaccgttgga
      661 tctattccag aacattatct tgctgccatc tgtaagcagg tgctcaaggg tttgtggtac
      721 cttcatcacg agaaacatat cattcacagg gacttgaaac cgtcaaattt gctgataaat
      781 caccgaggtg aagtcaaaat caccgatttt ggtgttagtg cgatacttgc aagcacatct
      841 ggattagcga atacatttgt tggcacgtac aactatatgt ctccagaaag aattattgga
      901 ggcaactacg gatataaaag tgatatatgg agcttaggtt tagttttact ggaatgtgcg
      961 acgggtcagt ttccgtactc cccaccccaa ccaggggaag gatgggtcaa cgtttatgaa
     1021 cttatggaaa ccattgttgg tcaaccacca cctcgtgcac cttcccacca attctctcct
     1081 cagttctgct catttattga agcatgtgtg cagaaagatc caaaggatag agcatcagca
     1141 aatgaactta tgtcgcatcc gttcatcact atgttcgatc acatgccagt agatctcgca
     1201 tcttatttca ctgaagccgg atctcctctt gcaaccttgt aatcactcca tgattgctgg
     1261 ctggggtagc gagggagcgt atagtgcaaa taaaagggca acagattttg ctatatcatg
     1321 actcgggttt taggtttgaa tctagtttgc aaattgaaga tgaaatttca cctagccttc
     1381 tgtaaattga gttttcaaac tttgatcctc aatgaatatg ttacacaatt atatcatcat
     1441 tgcttttatt gtccttcaat tgtaatgatt cacaccaata tattttatgg ttttttttat
     1501 tgagagtaaa
//
LOCUS       XM_071886302             939 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904366), mRNA.
ACCESSION   XM_071886302
VERSION     XM_071886302.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..939
                     /gene="LOC139904366"
                     /note="uncharacterized LOC139904366; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904366"
     CDS             120..578
                     /gene="LOC139904366"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742403.1"
                     /db_xref="GeneID:139904366"
                     /translation="MSRLENKLGLSGFTDAAMEEGKVLKNGLELVKSLSDKHLDLLRP
                     SSRLFSMFKGHTSNNNDREKGKYALIKDADDFQQGLYDKPLPCFGCGIGWFSFLVGFA
                     CPLTWYYATFLYFGNYYRKDPRERAGLAASAIAAMGCSVILFIVAMIMLF"
     polyA_site      939
                     /gene="LOC139904366"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctttaggaag tgatagcaag gaggaagtga tagggagaag cctgctggac atttcaactt
       61 caaatcagtg gaaatggatc agagcagtta gcccagatct tcattatctg caagagagaa
      121 tgagtagact tgaaaataaa ttgggacttt ctggtttcac agatgcggca atggaggagg
      181 ggaaggtttt gaaaaatggc cttgaattgg tgaaatcact ttcggataag catcttgatc
      241 ttttgaggcc ttcatctcgc ttattttcca tgtttaaagg gcatacatca aataacaatg
      301 atcgtgagaa aggcaagtat gcacttatta aggatgctga tgacttccaa caaggacttt
      361 atgacaagcc gcttccttgt tttggttgtg gaattggttg gttttctttt ttagtaggat
      421 ttgcatgccc tttgacatgg tactatgcaa catttctcta ctttggaaac tattatcgga
      481 aagatcctag ggagcgtgct ggtcttgctg cttctgcaat tgctgcgatg ggctgttcgg
      541 ttatcttgtt tatcgtggca atgatcatgc tgttctagca gattgctcct tgaagataaa
      601 gtttttgact tgtgcagcag cttttatata caaatacaag tcttgatgaa cataaaaata
      661 gtttaaaatt gcattatcaa cacaaatcct gtataccaat taaactgtac aatcttgaga
      721 agtcttctat caaagtactt ttgtgcactg gactattgta taaaagtttt tgttacagtg
      781 aaaaaaaacc tcatatcttg tactttgtac gtgctctaag ggtctgttgc tggaggtatt
      841 ttgttactca ggtttctgct tgtgcttaat tggcatcgtt tattctgctg tgcgtgttat
      901 tcagatttaa agtttaatga atgagttttc atattttaa
//
LOCUS       XM_071886303            1202 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904367), mRNA.
ACCESSION   XM_071886303
VERSION     XM_071886303.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1202
                     /gene="LOC139904367"
                     /note="uncharacterized LOC139904367; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904367"
     CDS             90..950
                     /gene="LOC139904367"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742404.1"
                     /db_xref="GeneID:139904367"
                     /translation="MVWFQCEDCGDNFKKPKLANHFRVCSANKLSCIDCGQMFGQQTV
                     QGHTQCITEMEKYGPKGQAKPSNGTPGKPNGSFKSKPEVDVNVGLSERPPWFCSLCNT
                     SATSKQTLLSHADGKKHRAKARAFHASKQPPKESEEPAPIVEGKSENVPNNELPVKVD
                     IKELHTSENNKRKLEAPENNAAGELGNDEVIQEVNAAEFGKTKRVKISKEDGEKKIKW
                     KKIITAILKSSPDGTMKMRKLRSQVLKTIGEAGSTINETQLIDTLERKINTSSKFAVN
                     GKCVQLVVKS"
     misc_feature    177..260
                     /gene="LOC139904367"
                     /note="LYAR-type C2HC zinc finger; Region: zf-LYAR;
                     pfam08790"
                     /db_xref="CDD:462605"
     misc_feature    372..446
                     /gene="LOC139904367"
                     /note="Zinc-finger of C2H2 type; Region: zf-met;
                     pfam12874"
                     /db_xref="CDD:463736"
ORIGIN      
        1 ttattttgtt aaaaaaacat tctagcccta acgaactcca tttcatctct gtagaaactt
       61 gaacgattaa caatcggcaa tttgcagcca tggtttggtt tcaatgcgaa gattgtggtg
      121 ataattttaa aaaaccaaag ctcgctaatc atttcagagt ttgctctgct aataagttat
      181 catgtatcga ttgtggacaa atgtttgggc aacagacagt tcaaggtcac acacaatgca
      241 tcacggaaat ggaaaaatat ggtccaaagg gccaagctaa accctcaaat ggaacacctg
      301 ggaaacccaa cggttcattt aagtcaaaac cagaggttga cgtaaacgtt ggattatcag
      361 aacgtcctcc gtggttttgc agtctttgta atacaagtgc tactagtaag caaaccctgc
      421 tttcccatgc tgatgggaag aaacacagag cgaaagcacg agcttttcat gcatctaagc
      481 aaccacccaa ggaatcggaa gaacccgcac ctattgttga aggtaaatca gaaaacgtac
      541 caaataatga gttaccagtg aaggtcgata ttaaggaatt acatacgtct gaaaacaaca
      601 agagaaagct tgaagcgcct gaaaataatg ctgctggtga attgggcaac gatgaagtga
      661 ttcaggaagt gaatgctgct gaatttggaa agaccaagag agttaaaatc agcaaagaag
      721 atggggagaa gaaaataaag tggaagaaga taataactgc aatcttgaaa tctagtcctg
      781 atggcactat gaagatgaga aaattaagaa gccaagttct gaagactatt ggggaggctg
      841 gttcaacgat aaatgagacc caactcattg atacactcga gcgtaagatt aataccagct
      901 ccaagtttgc tgttaacggg aagtgtgttc aattagttgt caaaagttaa ggactgggga
      961 tctatgtttt gttattgtaa tgctcagggt ttgcacatga agggcccatc agcaggatac
     1021 gagctctcct catgtctttc cctgaattgt ttattgcatc tttttggaga tcaactccag
     1081 tagagatgaa tattttgtta gaaaccctaa tatatggagt attatttatt atttatttat
     1141 aaacaaatga aagagaatag actcttttct tattgtgaaa ttcaaattga aataagcttt
     1201 aa
//
LOCUS       XM_071886304            1651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tubulin beta-2 chain-like
            (LOC139904368), mRNA.
ACCESSION   XM_071886304
VERSION     XM_071886304.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1651
                     /gene="LOC139904368"
                     /note="tubulin beta-2 chain-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100
                     Proteins"
                     /db_xref="GeneID:139904368"
     CDS             100..1437
                     /gene="LOC139904368"
                     /codon_start=1
                     /product="tubulin beta-2 chain-like"
                     /protein_id="XP_071742405.1"
                     /db_xref="GeneID:139904368"
                     /translation="MREILHIQGGQCGNQIGAKFWEVVCAEHGIDVTGKYTGDSELQL
                     ERINVYYNEASGGRFVPRAVLMDLEPGTMDSLRSGAYGQIFRPDNFVFGQSGAGNNWA
                     KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP
                     DRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT
                     TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR
                     GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAIYRGKMSTKEVDEQMLNVQ
                     NKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK
                     AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEEEEEYDEA"
     misc_feature    100..1422
                     /gene="LOC139904368"
                     /note="tubulin beta chain; Provisional; Region: PLN00220"
                     /db_xref="CDD:215107"
     polyA_site      1651
                     /gene="LOC139904368"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcagcctcct tttgaattct ctcttgtaag acctaatcct cactcccaaa cgcacacacc
       61 actctcccaa acactcaatc aaacaaatcg ccgacgaaaa tgagagaaat cttacatatt
      121 caaggaggac agtgcggaaa ccagatcgga gcaaagtttt gggaggtagt gtgtgcggaa
      181 cacggaatcg acgtcaccgg aaagtacacc ggagattcag agttacagct cgagagaatc
      241 aacgtctatt acaatgaagc gagtggtgga aggtttgttc cacgcgccgt gcttatggat
      301 ctggagccag gaacgatgga cagtctcaga tctggagcgt acggacagat cttcaggcct
      361 gataactttg tgtttggtca atctggtgct ggtaataatt gggcgaaagg acattatact
      421 gaaggtgctg agttgattga ttcagttttg gatgttgtta ggaaggaagc tgagaactgt
      481 gattgcttac aaggatttca ggtttgtcat tctcttggag gtggaacggg atccgggatg
      541 ggtacccttt tgatctcaaa gatcagggaa gagtatcctg accgtatgat gatgaccttt
      601 tctgtattcc catcaccaaa ggtgtccgac actgttgttg agccttacaa tgccaccttg
      661 tctgtccacc aacttgttga aaatgctgat gagtgtatgg ttcttgataa tgaagctttg
      721 tatgatattt gtttcagaac actcaaactg accaccccaa gttttggtga tctaaatcat
      781 ctcatatctg caaccatgtc tggagtgact tgctgtctaa ggtttcccgg acaactcaac
      841 tccgatctac gaaagcttgc tgtgaatctc atcccgttcc cgcgtctcca ctttttcatg
      901 gttggttttg ctcctctcac ttcacgtggg tcccagcagt accgtgctct cacagtccct
      961 gagctcaccc agcagatgtg ggatgccaag aacatgatgt gtgctgctga cccacgacac
     1021 gggcgatact tgaccgcatc cgccatctac cgtggtaaaa tgagcaccaa agaagttgac
     1081 gagcagatgc ttaacgtcca gaacaagaac tcgtcttact ttgttgagtg gatcccgaac
     1141 aacgttaagt ccaccgtttg tgacatccca ccaactggtt tgaaaatggc atcaacattc
     1201 attggaaact cgacctccat tcaagagatg tttaggcgtg tgagtgaaca gtttactgct
     1261 atgttcaggc gaaaggcttt tctgcattgg tacacgggtg aaggtatgga cgaaatggag
     1321 tttacagagg cagagagcaa catgaacgat ttggtttcgg agtatcagca gtatcaggat
     1381 gcgactgctg atgaggaggg agagtatgag gaggaggagg agtacgatga ggcctaagaa
     1441 acaacttaaa acttactttt tatgagtatc aagtgtattg gttttatgta gttctgagta
     1501 gtgattacag tctctggttg taatctctgc tgccagtcat attatgcaaa cactgtagga
     1561 aagaaccata ttttattttt gttttgctgg aaggtttgtg ttatttgtgt atttggatat
     1621 cagtttctgt aatattttat ctttgtttat c
//
LOCUS       XR_011778757            1304 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904369), transcript variant X1, ncRNA.
ACCESSION   XR_011778757
VERSION     XR_011778757.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1304
                     /gene="LOC139904369"
                     /note="uncharacterized LOC139904369; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904369"
     ncRNA           1..1304
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904369"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904369"
ORIGIN      
        1 aatacgattt ccaattttca catgtccgtt cttgattgct atgtcttcga taccccaatt
       61 tcataataac atttgttttt ctctttttga caaaaataac cgctattgct tgaattatga
      121 ttgcgtttcg aaatgatacc cacctatcga aaaaaatata gtgaaatcgt tatgttgatg
      181 attctaccgt ttatgagatc aacgggtata aaaatggcga taatcttatt ctgtttcaca
      241 tttaatcaat cgtttgttgt gttaattatt ttataaattt ggggttttca tatggatggc
      301 accagatttt ttgaattcag ggcatcctcc gttaggcatg aagggaaatt tgccctaaat
      361 ttgggatgag gacgaatatc atattgaaaa taatccatct taattggtaa tatcagtttc
      421 aattcagact caacgtttaa tcatcatccg atttatctgt acttttatct cgtcgttaac
      481 atttattcat agctttaaat tcacattaca atcggaattt attacgattt taagatcagt
      541 gttgtgagaa aaaccaaggc tataagatgc cactctttta attttctcaa tgatgtttac
      601 aactttgtta actacaagga tgttcaagaa tggcgagtgt ctaagaatga tgtctttgat
      661 gttgtcagac agttagtgaa aatgaagcag tttcgtgtga ttgtggaaaa taatgctgta
      721 aagaaatcta ttgaatttga gctacaagat gcaaacgggc cggcttaaat gcgaattgga
      781 tatatgacat tccaatactt actgatgtag agccaacact gagaagtttc ttggtggaat
      841 taggcaatgc tgacagaata cttggaatcc agtttagcaa gggcatcatc taatagactc
      901 gttcagggca ttataaaact caggaccggc ctgatactgc agctggagcg ttggaaaaag
      961 atgatcctcg tcatgttcag ccctatagtg atgcaggatc gggtcaatat gtgggaccaa
     1021 ttgggttgct ggattattgg gctggataca tgaatcataa tggtgggctt gaagaacaaa
     1081 ataatgggct tgcaaaatat tggaaggagt atatggatcg tgttcctgta catggaaatt
     1141 tcataggcaa caagtcatgc ccaactggaa ttggataagg atgaaatctt ctaaatgttt
     1201 tatcttattt taattattcc aatagacctc tagttttcct gtttgtttac gttttttttg
     1261 ataattatta ataaaagaat acacaaggcc gtagcccttg gttc
//
LOCUS       XR_011778758            1299 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904369), transcript variant X2, ncRNA.
ACCESSION   XR_011778758
VERSION     XR_011778758.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1299
                     /gene="LOC139904369"
                     /note="uncharacterized LOC139904369; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904369"
     ncRNA           1..1299
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904369"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904369"
ORIGIN      
        1 aatacgattt ccaattttca catgtccgtt cttgattgct atgtcttcga taccccaatt
       61 tcataataac atttgttttt ctctttttga caaaaataac cgctattgct tgaattatga
      121 ttgcgtttcg aaatgatacc cacctatcga aaaaaatata gtgaaatcgt tatgttgatg
      181 attctaccgt ttatgagatc aacgggtata aaaatggcga taatcttatt ctgtttcaca
      241 tttaatcaat cgtttgttgt gttaattatt ttataaattt ggggttttca tatggatggc
      301 accagatttt ttgaattcag ggcatcctcc gttaggcatg aagggaaatt tgccctaaat
      361 ttgggatgag gacgaatatc atattgaaaa taatccatct taattggtaa tatcagtttc
      421 aattcagact caacgtttaa tcatcatccg atttatctgt acttttatct cgtcgttaac
      481 atttattcat agctttaaat tcacattaca atcggaattt attacgattt taagatcagt
      541 gttgtgagaa aaaccaaggc tataagatgc cactctttta attttctcaa tgatgtttac
      601 aactttgtta actacaagga tgttcaagaa tggcgagtgt ctaagaatga tgtctttgat
      661 gttgtcagac agttagtgaa aatgaagcag tttcgtgtga ttgtggaaaa taatgctgta
      721 aagaaatcta ttgaatttga gctacaagat gcaaacgggc cggcttaaat gcgaattgga
      781 tatatgacat tccaatactt actgatgtag agccaacact gagaagtttc ttggtggaat
      841 taggcaatgc tgacagaata cttggaatcc agcaagggca tcatctaata gactcgttca
      901 gggcattata aaactcagga ccggcctgat actgcagctg gagcgttgga aaaagatgat
      961 cctcgtcatg ttcagcccta tagtgatgca ggatcgggtc aatatgtggg accaattggg
     1021 ttgctggatt attgggctgg atacatgaat cataatggtg ggcttgaaga acaaaataat
     1081 gggcttgcaa aatattggaa ggagtatatg gatcgtgttc ctgtacatgg aaatttcata
     1141 ggcaacaagt catgcccaac tggaattgga taaggatgaa atcttctaaa tgttttatct
     1201 tattttaatt attccaatag acctctagtt ttcctgtttg tttacgtttt ttttgataat
     1261 tattaataaa agaatacaca aggccgtagc ccttggttc
//
LOCUS       XR_011778759            1270 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904369), transcript variant X3, ncRNA.
ACCESSION   XR_011778759
VERSION     XR_011778759.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1270
                     /gene="LOC139904369"
                     /note="uncharacterized LOC139904369; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904369"
     ncRNA           1..1270
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904369"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904369"
ORIGIN      
        1 aatacgattt ccaattttca catgtccgtt cttgattgct atgtcttcga taccccaatt
       61 tcataataac atttgttttt ctctttttga caaaaataac cgctattgct tgaattatga
      121 ttgcgtttcg aaatgatacc cacctatcga aaaaaatata gtgaaatcgt tatgttgatg
      181 attctaccgt ttatgagatc aacgggtata aaaatggcga taatcttatt ctgtttcaca
      241 tttaatcaat cgtttgttgt gttaattatt ttataaattt ggggttttca tatggatggc
      301 accagatttt ttgaattcag ggcatcctcc gttaggcatg aagggaaatt tgccctaaat
      361 ttgggatgag gacgaatatc atattgaaaa taatccatct taattggtaa tatcagtttc
      421 aattcagact caacgtttaa tcatcatccg atttatctgt acttttatct cgtcgttaac
      481 atttattcat agctttaaat tcacattaca atcggaattt attacgattt taagatcagt
      541 gttgtgagaa aaaccaaggc tataagatgc cactctttta attttctcaa tgatgtttac
      601 aactttgtta actacaagga tgttcaagaa tggcgagtgt ctaagaatga tgtctttgat
      661 gttgtcagac agttagtgaa aatgaagcag tttcgtgtga ttgtggaaaa taatgctgta
      721 aagaaatcta ttgaatttga gctacaagat gcaaacgggc cggcttaaat gcgaattgga
      781 tatatgacat tccaatactt actgatgtag agccaacact gagaagtttc ttggtggaat
      841 taggcaatgc tgacagaata cttggaatcc agggcattat aaaactcagg accggcctga
      901 tactgcagct ggagcgttgg aaaaagatga tcctcgtcat gttcagccct atagtgatgc
      961 aggatcgggt caatatgtgg gaccaattgg gttgctggat tattgggctg gatacatgaa
     1021 tcataatggt gggcttgaag aacaaaataa tgggcttgca aaatattgga aggagtatat
     1081 ggatcgtgtt cctgtacatg gaaatttcat aggcaacaag tcatgcccaa ctggaattgg
     1141 ataaggatga aatcttctaa atgttttatc ttattttaat tattccaata gacctctagt
     1201 tttcctgttt gtttacgttt tttttgataa ttattaataa aagaatacac aaggccgtag
     1261 cccttggttc
//
LOCUS       XM_071886305            1487 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904370), transcript variant X1, mRNA.
ACCESSION   XM_071886305
VERSION     XM_071886305.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1487
                     /gene="LOC139904370"
                     /note="uncharacterized LOC139904370; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904370"
     CDS             89..1309
                     /gene="LOC139904370"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742406.1"
                     /db_xref="GeneID:139904370"
                     /translation="MDPMYQVTGKLTKESDVYTFGVLLLEVLCGVPELVDTDDYQERH
                     VTELVPKRLEQQNMLRKIVHFDIRDEITSESLETYSKIASRCVLQDPDKRPTMAEVVI
                     ELEKALRFQGGELPQVHILGSSNGKGHLPEETVDTSDQEKSKQEESFPGRLLDSEESG
                     IVTNVTGVEAAKKEIGESTDDADNTKEIPMDLKAAIEEYEISEVDKKSKIVKSTTYSN
                     NGDNNDTLAMQQEQSHVDEGVNVEKDNTEDANVTAMEITMAQEPSILDSDNVIVTTGK
                     HTAILKGQKTPEFTVNNITRDVDVSEFATNDDDDDKLLSNQDFGSKTSNNDNSTCSES
                     ESNNGDEFTPSDYLIKSPANGNMKKTTTSYGSGNCCCCSWWCYLFDSVVFYGGQFWNE
                     VVCCFNGISSSKRD"
     misc_feature    <89..406
                     /gene="LOC139904370"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     polyA_site      1487
                     /gene="LOC139904370"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attatcatcg agatttgaag ccaaagtttc aagttttgga ttacccaaac tactacccgg
       61 agatgttcag attgctcctc ggagatccat ggatcctatg tatcaagtca ccgggaaatt
      121 gaccaaggag tctgacgtgt atactttcgg cgtgttattg cttgaagttt tatgtggggt
      181 gccagaattg gtcgataccg atgattatca ggagcggcat gttaccgaat tggtccccaa
      241 gaggctggaa cagcagaata tgttacgcaa gattgtgcat tttgatatta gagatgaaat
      301 aacaagtgaa tccttggaaa catattccaa aatcgcatct agatgtgtgt tacaagaccc
      361 tgacaaacgt cctaccatgg cagaggtcgt catagaactc gaaaaagcat tgagattcca
      421 gggaggtgaa ctgccccaag tacacattct tggtagcagc aacggcaagg gtcatctacc
      481 tgaagaaacc gtcgatacat ctgatcagga aaagtccaag caagaagaga gctttcctgg
      541 tcgattatta gacagtgaag agagtgggat tgtaacaaat gtaacaggcg ttgaggctgc
      601 taaaaaagag attggtgaga gcacagacga tgctgacaac acaaaagaaa ttcccatgga
      661 tctaaaggca gctatcgagg aatatgagat aagtgaggtt gataagaaaa gcaagatagt
      721 taagagtact acatattcta acaatggtga caataatgat actttggcca tgcagcaaga
      781 gcagagtcat gtagatgaag gagtcaatgt tgagaaagat aacactgaag atgcaaatgt
      841 tacagccatg gagatcacaa tggcgcagga accatcgatt ctggattcag acaatgtgat
      901 tgtgaccacc ggaaaacata ccgcaatact gaaaggccag aagacacctg agtttactgt
      961 aaataatatt actagagatg tagatgtgag tgagtttgcc accaatgatg atgatgatga
     1021 taagttacta tccaaccaag attttggaag caagacaagt aataatgata atagtacatg
     1081 ctccgaatca gagtctaaca atggtgatga gtttactcct tcagattatc tgatcaagag
     1141 tcccgccaat ggtaatatga aaaaaactac tacttcgtat ggatccggaa actgctgttg
     1201 ctgttcttgg tggtgctacc tctttgacag cgttgttttc tacggaggtc aattttggaa
     1261 tgaagtggta tgttgtttca atgggattag ttcaagtaaa cgagattaag gaaaataata
     1321 ttgagctccg ggacgtgttc agtaccgggt tggttgcaat gaattgttat taatgagatg
     1381 agattttgta aacattgttt atacatgaag gattgatatg taccaaagga tgttttttca
     1441 tttatgaaca attttacaca tcaaatacat acacttggat aaataca
//
LOCUS       XM_071886306            1484 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904370), transcript variant X2, mRNA.
ACCESSION   XM_071886306
VERSION     XM_071886306.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1484
                     /gene="LOC139904370"
                     /note="uncharacterized LOC139904370; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904370"
     CDS             89..1306
                     /gene="LOC139904370"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742407.1"
                     /db_xref="GeneID:139904370"
                     /translation="MDPMYQVTGKLTKESDVYTFGVLLLEVLCGVPELVDTDDYQERH
                     VTELVPKRLEQQNMLRKIVHFDIRDEITSESLETYSKIASRCVLQDPDKRPTMAEVVI
                     ELEKALRFQGGELPQVHILGSSNGKGHLPEETVDTSDQEKSKQEESFPGRLLDSEESG
                     IVTNVTGVEAAKKEIGESTDDADNTKEIPMDLKAAIEEYEISEVDKKSKIVKSTTYSN
                     NGDNNDTLAMQEQSHVDEGVNVEKDNTEDANVTAMEITMAQEPSILDSDNVIVTTGKH
                     TAILKGQKTPEFTVNNITRDVDVSEFATNDDDDDKLLSNQDFGSKTSNNDNSTCSESE
                     SNNGDEFTPSDYLIKSPANGNMKKTTTSYGSGNCCCCSWWCYLFDSVVFYGGQFWNEV
                     VCCFNGISSSKRD"
     misc_feature    <89..406
                     /gene="LOC139904370"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     polyA_site      1484
                     /gene="LOC139904370"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attatcatcg agatttgaag ccaaagtttc aagttttgga ttacccaaac tactacccgg
       61 agatgttcag attgctcctc ggagatccat ggatcctatg tatcaagtca ccgggaaatt
      121 gaccaaggag tctgacgtgt atactttcgg cgtgttattg cttgaagttt tatgtggggt
      181 gccagaattg gtcgataccg atgattatca ggagcggcat gttaccgaat tggtccccaa
      241 gaggctggaa cagcagaata tgttacgcaa gattgtgcat tttgatatta gagatgaaat
      301 aacaagtgaa tccttggaaa catattccaa aatcgcatct agatgtgtgt tacaagaccc
      361 tgacaaacgt cctaccatgg cagaggtcgt catagaactc gaaaaagcat tgagattcca
      421 gggaggtgaa ctgccccaag tacacattct tggtagcagc aacggcaagg gtcatctacc
      481 tgaagaaacc gtcgatacat ctgatcagga aaagtccaag caagaagaga gctttcctgg
      541 tcgattatta gacagtgaag agagtgggat tgtaacaaat gtaacaggcg ttgaggctgc
      601 taaaaaagag attggtgaga gcacagacga tgctgacaac acaaaagaaa ttcccatgga
      661 tctaaaggca gctatcgagg aatatgagat aagtgaggtt gataagaaaa gcaagatagt
      721 taagagtact acatattcta acaatggtga caataatgat actttggcca tgcaagagca
      781 gagtcatgta gatgaaggag tcaatgttga gaaagataac actgaagatg caaatgttac
      841 agccatggag atcacaatgg cgcaggaacc atcgattctg gattcagaca atgtgattgt
      901 gaccaccgga aaacataccg caatactgaa aggccagaag acacctgagt ttactgtaaa
      961 taatattact agagatgtag atgtgagtga gtttgccacc aatgatgatg atgatgataa
     1021 gttactatcc aaccaagatt ttggaagcaa gacaagtaat aatgataata gtacatgctc
     1081 cgaatcagag tctaacaatg gtgatgagtt tactccttca gattatctga tcaagagtcc
     1141 cgccaatggt aatatgaaaa aaactactac ttcgtatgga tccggaaact gctgttgctg
     1201 ttcttggtgg tgctacctct ttgacagcgt tgttttctac ggaggtcaat tttggaatga
     1261 agtggtatgt tgtttcaatg ggattagttc aagtaaacga gattaaggaa aataatattg
     1321 agctccggga cgtgttcagt accgggttgg ttgcaatgaa ttgttattaa tgagatgaga
     1381 ttttgtaaac attgtttata catgaaggat tgatatgtac caaaggatgt tttttcattt
     1441 atgaacaatt ttacacatca aatacataca cttggataaa taca
//
LOCUS       XM_071886307            1503 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904370), transcript variant X3, mRNA.
ACCESSION   XM_071886307
VERSION     XM_071886307.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1503
                     /gene="LOC139904370"
                     /note="uncharacterized LOC139904370; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904370"
     CDS             89..1279
                     /gene="LOC139904370"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742408.1"
                     /db_xref="GeneID:139904370"
                     /translation="MDPMYQVTGKLTKESDVYTFGVLLLEVLCGVPELVDTDDYQERH
                     VTELVPKRLEQQNMLRKIVHFDIRDEITSESLETYSKIASRCVLQDPDKRPTMAEVVI
                     ELEKALRFQGGELPQVHILGSSNGKGHLPEETVDTSDQEKSKQEESFPGRLLDSEESG
                     IVTNVTGVEAAKKEIGESTDDADNTKEIPMDLKAAIEEYEISEVDKKSKIVKSTTYSN
                     NGDNNDTLAMQQEQSHVDEGVNVEKDNTEDANVTAMEITMAQEPSILDSDNVIVTTGK
                     HTAILKGQKTPEFTVNNITRDVDVSEFATNDDDDDKLLSNQDFGSKTSNNDNSTCSES
                     ESNNGDEFTPSDYLIKSPANGNMKKTTTSYGSGNCCCCSWWCYLFDSLHLLQRCFLRR
                     SILE"
     misc_feature    <89..406
                     /gene="LOC139904370"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     polyA_site      1503
                     /gene="LOC139904370"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attatcatcg agatttgaag ccaaagtttc aagttttgga ttacccaaac tactacccgg
       61 agatgttcag attgctcctc ggagatccat ggatcctatg tatcaagtca ccgggaaatt
      121 gaccaaggag tctgacgtgt atactttcgg cgtgttattg cttgaagttt tatgtggggt
      181 gccagaattg gtcgataccg atgattatca ggagcggcat gttaccgaat tggtccccaa
      241 gaggctggaa cagcagaata tgttacgcaa gattgtgcat tttgatatta gagatgaaat
      301 aacaagtgaa tccttggaaa catattccaa aatcgcatct agatgtgtgt tacaagaccc
      361 tgacaaacgt cctaccatgg cagaggtcgt catagaactc gaaaaagcat tgagattcca
      421 gggaggtgaa ctgccccaag tacacattct tggtagcagc aacggcaagg gtcatctacc
      481 tgaagaaacc gtcgatacat ctgatcagga aaagtccaag caagaagaga gctttcctgg
      541 tcgattatta gacagtgaag agagtgggat tgtaacaaat gtaacaggcg ttgaggctgc
      601 taaaaaagag attggtgaga gcacagacga tgctgacaac acaaaagaaa ttcccatgga
      661 tctaaaggca gctatcgagg aatatgagat aagtgaggtt gataagaaaa gcaagatagt
      721 taagagtact acatattcta acaatggtga caataatgat actttggcca tgcagcaaga
      781 gcagagtcat gtagatgaag gagtcaatgt tgagaaagat aacactgaag atgcaaatgt
      841 tacagccatg gagatcacaa tggcgcagga accatcgatt ctggattcag acaatgtgat
      901 tgtgaccacc ggaaaacata ccgcaatact gaaaggccag aagacacctg agtttactgt
      961 aaataatatt actagagatg tagatgtgag tgagtttgcc accaatgatg atgatgatga
     1021 taagttacta tccaaccaag attttggaag caagacaagt aataatgata atagtacatg
     1081 ctccgaatca gagtctaaca atggtgatga gtttactcct tcagattatc tgatcaagag
     1141 tcccgccaat ggtaatatga aaaaaactac tacttcgtat ggatccggaa actgctgttg
     1201 ctgttcttgg tggtgctacc tctttgacag tcttcatctg ttacagcgtt gttttctacg
     1261 gaggtcaatt ttggaatgaa gtggtatgtt gtttcaatgg gattagttca agtaaacgag
     1321 attaaggaaa ataatattga gctccgggac gtgttcagta ccgggttggt tgcaatgaat
     1381 tgttattaat gagatgagat tttgtaaaca ttgtttatac atgaaggatt gatatgtacc
     1441 aaaggatgtt ttttcattta tgaacaattt tacacatcaa atacatacac ttggataaat
     1501 aca
//
LOCUS       XR_011778760            1657 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904371), transcript variant X1, ncRNA.
ACCESSION   XR_011778760
VERSION     XR_011778760.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1657
                     /gene="LOC139904371"
                     /note="uncharacterized LOC139904371; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904371"
     ncRNA           1..1657
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904371"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904371"
ORIGIN      
        1 ctcttcaaaa aagaaaacta ccacatcctg ttcaccttcg attgtgtgtt catctcgccg
       61 tattaggcga cacaactacc accaatgaat ctttcatgtt tttcttgaca ataccgtaca
      121 cattttttct attaacgaca aattttttga gaccgccgga aacatctccg gtgactggaa
      181 tgtcgatgaa gaagacgtcg ttaatacgtt cccctaacat ctatgcagat atcggtctta
      241 agttgttatt caattcgcca actccttcaa tactcacaga tcaggtacgt ttgctacacc
      301 tttcgactat tgctgtttga gacgatagat aagggtcagc ggttagggtt tttgtttctt
      361 ttaatttaca ggtttgaatt gattatgttt tggctttggg ttatgcccac aaagtgtttg
      421 ataaaatgcc tttaaacttt tgaatgtaag tgtttgaatt tttgtttact aataatttgt
      481 agataatggt gaataattgt tgttacaact aatctttgat gtttgaattg attatgtaag
      541 ttcatatttc aggtaccatg tttatttcgt ttatgtcata taataattga gtttatcata
      601 tttcgttttt gtcaggtctt tgattttgta tttagttaat gtttactctt tcatatgcgc
      661 catgtctgac ctggaagaga atggtgttga tcgtatgttt gacttgggtt acatacaact
      721 gaaaatgaca tgagtgaatt aatttgcaag gtttagttca ttatattaca cttcatctaa
      781 agaattgatt aaaagtggaa aaattcgcat gggcatttat atatttatct aacgaaagac
      841 gttaatgtct attcaacaca acccatatcg actcattcga gaaaaatggt tgaactgacc
      901 acctgtgtta ttttatagtg taaattattt tctgatacat ccatagaacc tacaattatt
      961 ctatgtgtgt ctactaactg tgtaggaaac tgatcgtgtt aaggcaaatg cgttcattca
     1021 gagtgaagct tcatggtcat aaaatgcagt atgagttttt aaaacttgtt gctgcaaatc
     1081 agaaagattt ctttactttc caatgaactg ttgacgaagt ggatgactga agagcatggt
     1141 gttataacgc ttgccacact tgcaaaaaga gactcgagat attcagtgaa ggcgctgcct
     1201 cgatcaaggg atgcaagacg acaacagact cagatcacat atattcatgt tattaaagaa
     1261 tcttttcttc caaaagtctt tatcagattg caaaaagttt agaagtcctt caatttttct
     1321 gaaactatca taacagtcgt gttgctgctt caactacgga taccaaagaa accgaagaat
     1381 atgatgtaag agccgatgat tctgtcaatg tgtcacgagg aaaataccat ctagactctt
     1441 gaagttcctt gtgcttgcaa tggcggcctc atggcaatac ttacgtttat atcaaggggg
     1501 ttcgtttgat atgcatttgc ttatatatta tgtattgttg ttatagtagc gaatgtgttg
     1561 tagcatggta ctagctataa gattaccctg cattggttgt ttattgtatc tcgaaaatta
     1621 taaaaattgt ggcatgactt tcgttcgtgt tttatca
//
LOCUS       XR_011778761            1570 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904371), transcript variant X2, ncRNA.
ACCESSION   XR_011778761
VERSION     XR_011778761.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1570
                     /gene="LOC139904371"
                     /note="uncharacterized LOC139904371; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904371"
     ncRNA           1..1570
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904371"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904371"
ORIGIN      
        1 ctcttcaaaa aagaaaacta ccacatcctg ttcaccttcg attgtgtgtt catctcgccg
       61 tattaggcga cacaactacc accaatgaat ctttcatgtt tttcttgaca ataccgtaca
      121 cattttttct attaacgaca aattttttga gaccgccgga aacatctccg gtgactggaa
      181 tgtcgatgaa gaagacgtcg ttaatacgtt cccctaacat ctatgcagat atcggtctta
      241 agttgttatt caattcgcca actccttcaa tactcacaga tcaggtttga attgattatg
      301 ttttggcttt gggttatgcc cacaaagtgt ttgataaaat gcctttaaac ttttgaatgt
      361 aagtgtttga atttttgttt actaataatt tgtagataat ggtgaataat tgttgttaca
      421 actaatcttt gatgtttgaa ttgattatgt aagttcatat ttcaggtacc atgtttattt
      481 cgtttatgtc atataataat tgagtttatc atatttcgtt tttgtcaggt ctttgatttt
      541 gtatttagtt aatgtttact ctttcatatg cgccatgtct gacctggaag agaatggtgt
      601 tgatcgtatg tttgacttgg gttacataca actgaaaatg acatgagtga attaatttgc
      661 aaggtttagt tcattatatt acacttcatc taaagaattg attaaaagtg gaaaaattcg
      721 catgggcatt tatatattta tctaacgaaa gacgttaatg tctattcaac acaacccata
      781 tcgactcatt cgagaaaaat ggttgaactg accacctgtg ttattttata gtgtaaatta
      841 ttttctgata catccataga acctacaatt attctatgtg tgtctactaa ctgtgtagga
      901 aactgatcgt gttaaggcaa atgcgttcat tcagagtgaa gcttcatggt cataaaatgc
      961 agtatgagtt tttaaaactt gttgctgcaa atcagaaaga tttctttact ttccaatgaa
     1021 ctgttgacga agtggatgac tgaagagcat ggtgttataa cgcttgccac acttgcaaaa
     1081 agagactcga gatattcagt gaaggcgctg cctcgatcaa gggatgcaag acgacaacag
     1141 actcagatca catatattca tgttattaaa gaatcttttc ttccaaaagt ctttatcaga
     1201 ttgcaaaaag tttagaagtc cttcaatttt tctgaaacta tcataacagt cgtgttgctg
     1261 cttcaactac ggataccaaa gaaaccgaag aatatgatgt aagagccgat gattctgtca
     1321 atgtgtcacg aggaaaatac catctagact cttgaagttc cttgtgcttg caatggcggc
     1381 ctcatggcaa tacttacgtt tatatcaagg gggttcgttt gatatgcatt tgcttatata
     1441 ttatgtattg ttgttatagt agcgaatgtg ttgtagcatg gtactagcta taagattacc
     1501 ctgcattggt tgtttattgt atctcgaaaa ttataaaaat tgtggcatga ctttcgttcg
     1561 tgttttatca
//
LOCUS       XR_011778762            1672 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904371), transcript variant X3, ncRNA.
ACCESSION   XR_011778762
VERSION     XR_011778762.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1672
                     /gene="LOC139904371"
                     /note="uncharacterized LOC139904371; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904371"
     ncRNA           1..1672
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904371"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904371"
ORIGIN      
        1 ctcttcaaaa aagaaaacta ccacatcctg ttcaccttcg attgtgtgtt catctcgccg
       61 tattaggcga cacaactacc accaatgaat ctttcatgtt tttcttgaca ataccgtaca
      121 cattttttct attaacgaca aattttttga gaccgccgga aacatctccg gtgactggaa
      181 tgtcgatgaa gaagacgtcg ttaatacgtt cccctaacat ctatgcagat atcggtctta
      241 agttgttatt caattcgcca actccttcaa tactcacaga tcaggtacgt ttgctacacc
      301 tttcgactat tgctgtttga gacgatagat aagggtcagc ggttagggtt tttgtttctt
      361 ttaatttaca ggtttgaatt gattatgttt tggctttggg ttatgcccac aaagtgtttg
      421 ataaaatgcc tttaaacttt tgaatgtaag tgtttgaatt tttgtttact aataatttgt
      481 agataatggt gaataattgt tgttacaact aatctttgat gtttgaattg attatgtaag
      541 ttcatatttc aggtaccatg tttatttcgt ttatgtcata taataattga gtttatcata
      601 tttcgttttt gtcaggtctt tgattttgta tttagttaat gtttactctt tcatatgcgc
      661 catgtctgac ctggaagaga atggtgttga tcgtatgttt gacttgggtt acatacaact
      721 gaaaatgaca tgagtgaatt aatttgcaag gtttagttca ttatattaca cttcatctaa
      781 agaattgatt aaaagtggaa aaattcgcat gggcatttat atatttatct aacgaaagac
      841 gttaatgtct attcaacaca acccatatcg actcattcga gaaaaatggt tgaactgacc
      901 acctgtgtta ttttatagtg taaattattt tctgatacat ccatagaacc tacaattatt
      961 ctatgtgtgt ctactaactg tgtaggaaac tgatcgtgtt aaggcaaatg cgttcattca
     1021 gagtgaagct tcatggtcat aaaatgcagt atgagttttt aaaacttgtt gctgcaaatc
     1081 agaatgcgat tttgcagaaa gatttcttta ctttccaatg aactgttgac gaagtggatg
     1141 actgaagagc atggtgttat aacgcttgcc acacttgcaa aaagagactc gagatattca
     1201 gtgaaggcgc tgcctcgatc aagggatgca agacgacaac agactcagat cacatatatt
     1261 catgttatta aagaatcttt tcttccaaaa gtctttatca gattgcaaaa agtttagaag
     1321 tccttcaatt tttctgaaac tatcataaca gtcgtgttgc tgcttcaact acggatacca
     1381 aagaaaccga agaatatgat gtaagagccg atgattctgt caatgtgtca cgaggaaaat
     1441 accatctaga ctcttgaagt tccttgtgct tgcaatggcg gcctcatggc aatacttacg
     1501 tttatatcaa gggggttcgt ttgatatgca tttgcttata tattatgtat tgttgttata
     1561 gtagcgaatg tgttgtagca tggtactagc tataagatta ccctgcattg gttgtttatt
     1621 gtatctcgaa aattataaaa attgtggcat gactttcgtt cgtgttttat ca
//
LOCUS       XM_071886308            2400 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipid:diacylglycerol
            acyltransferase 1-like (LOC139904372), mRNA.
ACCESSION   XM_071886308
VERSION     XM_071886308.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2400
                     /gene="LOC139904372"
                     /note="phospholipid:diacylglycerol acyltransferase 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 31 Proteins"
                     /db_xref="GeneID:139904372"
     CDS             312..2387
                     /gene="LOC139904372"
                     /codon_start=1
                     /product="phospholipid:diacylglycerol acyltransferase
                     1-like"
                     /protein_id="XP_071742409.1"
                     /db_xref="GeneID:139904372"
                     /translation="MPARKRKGGGDSKKTTTSGQKPASQIPNKSEDKKLLDKEKKTND
                     LNLISNSNNNKLKKLNSRRSCIDGCCWMIGFICSTWWFLLFLYNAMPASFPQYVTEAI
                     TGPTPDPPGVKLHKEGLKAKHPVVFVPGIVTGGLELWEGHPCMDGLFRKRLWGGTFGE
                     VYKRPLCWIEHMSLDNETGMDPPGVRVRPVSGLVAADYFAAGYFVWAVLIANLARIGY
                     EEKNMYMAAYDWRLSFQNTEVRDQTLSRMKSNIELMVATSGEKVVVIPHSMGVLYFLH
                     FMKWVEAPAPMGGGGGSDWCDKHIKAVMNIGGPFLGLPKIVAGLFSAEAKDIAVARAV
                     APGVLDLDIFGFQTLQHAMRMTRTWDSTMSLIPKGGDAIWGTLDWAPEADHDCVAKQV
                     KKINDTTQAAVDDDDDDDDDDKSVTLNYGRIISFGKDVAEIHSSKVERVEFKGAVKGN
                     NFANRSCRDVWNEYHEMGIEGIKAVADYKAFTVESVLELLEFVAPRMMKRGSSHYSYG
                     IADNLDDDKYNHYKYWSNPLESRLPNAPEMEIFSMYGVGLATERSYVYKFSPAAECYI
                     PFQIDTTAEGGKDKGCLRAGVYSVDGDETVPVLSAGYMCAKGWRGQTRFNPWGIKTYI
                     REYNHAPPLTLLEGRGTQSGNHVDIMGNFALIEDIIRVAAGATGNSLGGDRVYSDIFK
                     WSERVNLQL"
     misc_feature    480..2384
                     /gene="LOC139904372"
                     /note="phosphatidylcholine-sterol O-acyltransferase;
                     Region: PLN02517"
                     /db_xref="CDD:178132"
ORIGIN      
        1 atccaacata cactctccct tgaccttcca ccatcgattt tagcggtaat caactcgtcg
       61 gacatctttc ctcctccgat catcggcgtc taccattcat gcacagcacc tcttttcccc
      121 tctttctata gaaaaacatc tccatttata tatactttta tttccattta caattaactc
      181 ttttattact caaagagtta gggtttaaaa tgcccccaca catgatttgt cactttactc
      241 tcagaattgt atcacatcac atttgatcaa tatatttgat ttcacacaca catatatata
      301 gatagatcaa tatgccggca aggaagcgaa agggcggcgg tgattccaag aagacaacaa
      361 cttccggcca gaagcccgcg tctcaaatcc ccaataaatc cgaagataaa aaattattag
      421 ataaggagaa aaaaacaaac gatttgaatt tgattagtaa tagtaataat aataaattaa
      481 agaaattgaa tagtagaagg tcatgtatag acggttgttg ttggatgatc ggatttatat
      541 gttcaacgtg gtggttttta ttatttttgt ataatgcgat gccggcatcg ttccctcaat
      601 acgtgacaga agcgataacg ggtccaacgc ccgacccgcc gggtgttaaa ttacacaaag
      661 aaggattgaa agcgaagcat ccggttgtat ttgtacccgg gattgtcacg ggtgggcttg
      721 agttatggga aggacaccct tgtatggatg gcttgtttag aaaacgcctt tggggtggca
      781 cttttggtga agtttacaaa aggcctttgt gttggattga gcatatgtca ctagataatg
      841 aaactgggat ggatcctccc ggtgtaaggg tgaggcctgt gtctggactt gtggctgccg
      901 attactttgc cgcaggctat tttgtgtggg cagttttgat tgccaatttg gcacgcattg
      961 gatatgagga gaagaacatg tatatggctg cttacgactg gaggctctca tttcaaaata
     1021 ctgaggtgcg agatcaaact ttaagcagga tgaaaagcaa tatagaactc atggtggcta
     1081 ctagcggtga aaaagtggtt gtgataccac attcaatggg tgttttgtac tttttgcatt
     1141 ttatgaaatg ggttgaagca ccggctccaa tgggtggtgg gggtggatca gattggtgcg
     1201 ataagcatat aaaggctgtg atgaatatag gtggaccctt tttggggctt ccaaaaatag
     1261 ttgcaggact cttttctgct gaagctaagg atattgctgt agccagggct gttgcacctg
     1321 gtgttctgga tttagatata tttggttttc aaacgttaca acatgcgatg aggatgacac
     1381 gtacgtggga ttcaacaatg tcattaatac caaaaggtgg ggatgccatt tggggtacac
     1441 tcgattgggc acctgaagca gaccatgatt gtgttgctaa gcaagttaag aagatcaatg
     1501 atactactca agcagctgtt gatgatgatg atgatgatga tgatgatgat aaatctgtaa
     1561 ctctaaatta tgggagaata atatcttttg ggaaggatgt ggctgaaata cattcatcaa
     1621 aagttgagag ggtggagttt aagggggcag tgaagggtaa taactttgca aacagatcat
     1681 gtcgagatgt atggaacgaa taccatgaaa tgggaattga ggggataaaa gctgttgcag
     1741 attacaaggc attcacagtt gaatctgttt tggaactttt ggaatttgtg gctccaagga
     1801 tgatgaaacg cggtagttcc cattactctt atggaatagc tgataattta gatgatgata
     1861 aatacaacca ctataagtac tggtctaatc cattagaatc caggttacca aatgccccag
     1921 agatggagat attttcaatg tatggagttg gtttagcaac tgaaagatcg tatgtttata
     1981 aatttagtcc agccgcagag tgttatatac cttttcagat cgatacgaca gctgagggtg
     2041 gaaaggataa aggttgtttg agagctgggg tatattctgt tgatggggat gaaacggttc
     2101 ctgttttaag tgcagggtac atgtgtgcta aaggttggcg tgggcaaacg agattcaatc
     2161 catgggggat caaaacgtat atcagagaat acaatcatgc acctccatta acactattag
     2221 aaggaagagg aacacaaagt ggaaaccatg ttgatataat gggaaatttt gcattgatag
     2281 aagatataat aagggtagca gccggagcca cgggtaacag tttgggagga gaccgggttt
     2341 attctgatat ctttaagtgg tcagaaaggg tgaacttaca actgtaaata tatatctgtt
//
LOCUS       XR_011778763             770 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904373), ncRNA.
ACCESSION   XR_011778763
VERSION     XR_011778763.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..770
                     /gene="LOC139904373"
                     /note="uncharacterized LOC139904373; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904373"
     ncRNA           1..770
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904373"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904373"
ORIGIN      
        1 tccagtctga aacacaatga attctctctt caagaacata caaccaccat cttcaaagaa
       61 gcagattaaa aacacgcatt agagatggat ctgtaattac gcctcttcta cgaccattat
      121 cttcaaaaat cgaaggcgag aatcactatt gaactaggtc agcgggttga tttccatcgt
      181 atcaatcgtt attgtacaag gatagcgggt agatttttca tgattaatca attgctaaat
      241 gatcatcgaa ggcaacaatc actatcgaac aaagtttttc tcaatgtact atgatcataa
      301 atcacgagca aaaatcagga tcgattcatc aaaaatcaaa tcagattagg tttgccaaga
      361 aattagggtt cacaagagat gttcacctat agagataaag cttggtaaag gaagaggttt
      421 tacgcattac tggattgtta tctgttaagt aacatttcac aggtattaca tactacacgg
      481 ttgtttgggc cagtggttct caatagggca ttactcaata tggccagtgg ttctcaagaa
      541 aaatgtggtg gtgctgcaaa cggaggaaaa ccgggatgga ttcaatgatt tagttcgcca
      601 taacatgttt gaaaagggtc aaagtaaacg tatatggctg agctttacaa agtcattgac
      661 tcttcagatg ttattcaggt tggtgttctt gtttggaatg aatgcttatt ttttaaagtt
      721 tttgctcatt ggcatatttc accacatgaa ttattacgtt ttgtgcttta
//
LOCUS       XM_071886309            1263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein Brevis radix-like 4
            (LOC139904375), transcript variant X1, mRNA.
ACCESSION   XM_071886309
VERSION     XM_071886309.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1263
                     /gene="LOC139904375"
                     /note="protein Brevis radix-like 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904375"
     CDS             1..1161
                     /gene="LOC139904375"
                     /codon_start=1
                     /product="protein Brevis radix-like 4 isoform X1"
                     /protein_id="XP_071742410.1"
                     /db_xref="GeneID:139904375"
                     /translation="MLTCVPRSKQPNDDDESNRNGDTLAAGKQPMKRFGSQIKYMALK
                     ASGAYRSCTPCTAHPSMMMMTSPQKQLQKSNDAESESSASVSELFRWSYRQTGSKNSS
                     SGRVWGKEMEARIKGISIGDMTAGTLSVSGSCGIDPPPVVLIQEIEPKKWVAQVEPGV
                     LITFISLPRGGNDLKQIRFSREMFNQWQAQRWWQQNFEKVMELYNVQKLINRQAFHPL
                     PTTLKSEHDTAQLDSRSLKFESIGNNPLKQTLSKERQLENQDSTLMSSDYDSSTLTAT
                     PKVSSISGTKTETSSSSSSSSSIIDASATSASSSKEVEADQSGERSISNVSDVDNEWV
                     EEDEPGVYITIRLVPGGSKELRRVRFSREKYGEVHARLWWEENRARVHKQYL"
     misc_feature    76..165
                     /gene="LOC139904375"
                     /note="Transcription factor BRX N-terminal domain; Region:
                     BRX_N; pfam13713"
                     /db_xref="CDD:404581"
     misc_feature    445..612
                     /gene="LOC139904375"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; Region: BRX; pfam08381"
                     /db_xref="CDD:429960"
     misc_feature    988..1155
                     /gene="LOC139904375"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; Region: BRX; pfam08381"
                     /db_xref="CDD:429960"
ORIGIN      
        1 atgttaactt gtgtccctcg ttcaaaacaa cctaatgatg acgatgaatc aaatcgcaat
       61 ggggatacac ttgccgccgg taaacaacct atgaaaaggt tcggttctca gattaagtac
      121 atggcgctaa aagcgtcagg agcgtatcga agttgcactc cgtgtacggc acacccatcc
      181 atgatgatga tgacttcacc acagaagcag ttacaaaaga gtaacgatgc ggaatcagaa
      241 tcatcggctt cagtctccga gctgttcagg tggtcttacc ggcaaactgg aagcaagaat
      301 tcgagctctg gcagagtgtg ggggaaggag atggaagcaa ggataaaagg catatcaata
      361 ggtgatatga cggcaggaac gctatcggtg tcgggtagct gtggtattga tccgccgccg
      421 gtggtattga tccaagagat tgaacctaaa aagtgggttg ctcaggttga accaggtgtt
      481 ttgatcacct ttatttcctt gccgcgtggt ggtaacgatc ttaaacaaat ccgtttcagc
      541 cgggaaatgt ttaaccagtg gcaagcgcaa agatggtggc aacagaattt cgaaaaggtc
      601 atggaacttt acaatgtcca gaagttaatt aatcgacaag cgtttcatcc ccttccaaca
      661 actcttaaat cagaacacga tactgcgcag ctcgactcaa ggagtttaaa atttgaatct
      721 attggaaaca atcctctaaa acaaactttg agtaaggaaa gacaacttga gaaccaggac
      781 tcaaccctaa tgagttcgga ctatgactcg tctactctca cagctactcc aaaagtatca
      841 agcattagtg gcactaaaac ggaaacatca tcatcatcat catcatcatc atcaataata
      901 gatgcctcgg ccacaagtgc tagctcatca aaagaggttg aggctgatca atcaggagag
      961 cgttccatca gcaacgttag tgatgttgat aatgaatggg ttgaagaaga tgaacctgga
     1021 gtctacataa ctatcagact tgttccaggc ggctcaaagg aactcagacg tgtcagattc
     1081 agccgtgaaa aatacggaga ggtgcacgcg agactctggt gggaagagaa ccgagcaagg
     1141 gtgcacaaac agtacttgtg attaattgaa gaaatataca gattttgagg gatatgattt
     1201 tggttcctaa actttgcctt ttaattgttc tttgcctcta catacatatg catatatatg
     1261 ttg
//
LOCUS       XM_071886310            1134 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein Brevis radix-like 4
            (LOC139904375), transcript variant X2, mRNA.
ACCESSION   XM_071886310
VERSION     XM_071886310.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1134
                     /gene="LOC139904375"
                     /note="protein Brevis radix-like 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904375"
     CDS             1..1128
                     /gene="LOC139904375"
                     /codon_start=1
                     /product="protein Brevis radix-like 4 isoform X2"
                     /protein_id="XP_071742411.1"
                     /db_xref="GeneID:139904375"
                     /translation="MLTCVPRSKQPNDDDESNRNGDTLAAGKQPMKRFGSQIKYMALK
                     ASGAYRSCTPCTAHPSMMMMTSPQKQLQKSNDAESESSASVSELFRWSYRQTGSKNSS
                     SGRVWGKEMEARIKGISIGDMTAGTLSVSGSCGIDPPPVVLIQEIEPKKWVAQVEPGV
                     LITFISLPRGGNDLKQIRFSREMFNQWQAQRWWQQNFEKVMELYNVQKLINRQAFHPL
                     PTTLKSEHDTAQLDSRSLKFESIGNNPLKQTLSKERQLENQDSTLMSSDYDSSTLTAT
                     PKVSSISGTKTETSSSSSSSSSIIDASATSASSSKEVEADQSGERSISNVSDVDNEWV
                     EEDEPGVYITIRLVPGGSKELRRVRFRSCSYYDSNRHVKCM"
     misc_feature    76..165
                     /gene="LOC139904375"
                     /note="Transcription factor BRX N-terminal domain; Region:
                     BRX_N; pfam13713"
                     /db_xref="CDD:404581"
     misc_feature    445..612
                     /gene="LOC139904375"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; Region: BRX; pfam08381"
                     /db_xref="CDD:429960"
     misc_feature    988..>1080
                     /gene="LOC139904375"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; Region: BRX; pfam08381"
                     /db_xref="CDD:429960"
ORIGIN      
        1 atgttaactt gtgtccctcg ttcaaaacaa cctaatgatg acgatgaatc aaatcgcaat
       61 ggggatacac ttgccgccgg taaacaacct atgaaaaggt tcggttctca gattaagtac
      121 atggcgctaa aagcgtcagg agcgtatcga agttgcactc cgtgtacggc acacccatcc
      181 atgatgatga tgacttcacc acagaagcag ttacaaaaga gtaacgatgc ggaatcagaa
      241 tcatcggctt cagtctccga gctgttcagg tggtcttacc ggcaaactgg aagcaagaat
      301 tcgagctctg gcagagtgtg ggggaaggag atggaagcaa ggataaaagg catatcaata
      361 ggtgatatga cggcaggaac gctatcggtg tcgggtagct gtggtattga tccgccgccg
      421 gtggtattga tccaagagat tgaacctaaa aagtgggttg ctcaggttga accaggtgtt
      481 ttgatcacct ttatttcctt gccgcgtggt ggtaacgatc ttaaacaaat ccgtttcagc
      541 cgggaaatgt ttaaccagtg gcaagcgcaa agatggtggc aacagaattt cgaaaaggtc
      601 atggaacttt acaatgtcca gaagttaatt aatcgacaag cgtttcatcc ccttccaaca
      661 actcttaaat cagaacacga tactgcgcag ctcgactcaa ggagtttaaa atttgaatct
      721 attggaaaca atcctctaaa acaaactttg agtaaggaaa gacaacttga gaaccaggac
      781 tcaaccctaa tgagttcgga ctatgactcg tctactctca cagctactcc aaaagtatca
      841 agcattagtg gcactaaaac ggaaacatca tcatcatcat catcatcatc atcaataata
      901 gatgcctcgg ccacaagtgc tagctcatca aaagaggttg aggctgatca atcaggagag
      961 cgttccatca gcaacgttag tgatgttgat aatgaatggg ttgaagaaga tgaacctgga
     1021 gtctacataa ctatcagact tgttccaggc ggctcaaagg aactcagacg tgtcagattc
     1081 agatcatgta gttattatga cagtaatcgg catgttaaat gtatgtagcc gtga
//
LOCUS       XM_071886311            2115 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides replication protein A 70 kDa
            DNA-binding subunit A (LOC139904376), mRNA.
ACCESSION   XM_071886311
VERSION     XM_071886311.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2115
                     /gene="LOC139904376"
                     /note="replication protein A 70 kDa DNA-binding subunit A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139904376"
     CDS             86..1972
                     /gene="LOC139904376"
                     /codon_start=1
                     /product="replication protein A 70 kDa DNA-binding subunit
                     A"
                     /protein_id="XP_071742412.1"
                     /db_xref="GeneID:139904376"
                     /translation="MPLNLTSNGIPAILAGDLNSKPLLQVLDINIISTAPERYRFLLS
                     DSLSSHYAMIATQLNDRVKSNIVRKGSVVQLIEYSCTTIQNRKIIIALNMEIIVPSCE
                     IIGNPKMYAESETVGHNPVSNVIPQRTAVPSTNYSTAKNVNNNTQTFRPTVQPAYQPP
                     PVYKSHGAILKNEAPARTIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSF
                     DLLDSDGGEIRVTCFNAVVDRFYDTIEVGKVYMISKGSLKPAKKNFNHLNNEWEIFLE
                     SSSTIDLCPDEDASSIPQQQFSFRPISEIETVENNSIIDVIGVVMSVEPCMPIMRKNG
                     METQKRTINLKDESGRSVELTLWGEFCNREGQKLQQLVVSGSSPVLAVKAGKVNDFSG
                     RSIGTVSSTQLFIDPDSPEANNLRHWFDKVGRNIDSQSISRDLPGGLKNDLRKTVSQI
                     KDEGLGRSKTDWVTVKATVTFVKTDNFCYTACPLKVGGDKQCNKKVARSGSSKWQCDR
                     CNQEFEECDYRYLLQCQVQDHTGLTWVTAFQEPGEKILGCPAKDLYMMKYEARDDDGF
                     ANVIKSRLFSEVLLKLKINEEPYGEEQRLKITVVKVDYVNYSSNTKFLLDSIPKSAST
                     FKVK"
     misc_feature    146..1945
                     /gene="LOC139904376"
                     /note="replication factor-a protein 1 (rpa1); Region:
                     rpa1; TIGR00617"
                     /db_xref="CDD:273177"
ORIGIN      
        1 tcccctttaa aaccctaatt ttcgctcaca aaatttcaca tatcatcatt ttcaagatat
       61 catacgataa accaaattgt taaaaatgcc tttaaatctg acctcaaatg gtattccggc
      121 gatactcgcc ggagacctca attcgaagcc attacttcag gtattagata ttaatatcat
      181 cagtactgca ccggaaaggt accgtttcct gctttccgat tccctatcat ctcattacgc
      241 aatgatcgct actcagctta atgatcgagt gaaaagcaac atcgttcgta aaggatccgt
      301 agttcagctt atcgagtact cttgcaccac aattcaaaat cgcaagatta ttattgccct
      361 aaacatggaa attattgtac cgtcatgtga aatcattggg aacccaaaaa tgtatgctga
      421 atctgagact gtgggtcaca atccagtttc gaatgttatc cctcagcgca cagcagtacc
      481 ctctactaat tattcgactg ccaaaaacgt gaacaacaac actcaaacct ttcggccaac
      541 tgttcaacct gcataccagc cacctccagt ttacaaaagc catggggcaa tattgaaaaa
      601 tgaggcccca gcacgcacca ttccaattgc tgctcttaac ccttaccaag gtagatgggc
      661 tatcaaggca agagttactg caaaaggaga tctgagacgc tataacaatg caaaaggaga
      721 tggaaaagtc ttttcttttg accttcttga ctcggatgga ggtgaaatac gcgtgacttg
      781 ttttaatgct gttgttgacc gcttctatga cacaattgaa gttgggaaag tttacatgat
      841 ctcaaagggc agtttaaaac cggccaagaa aaatttcaac catctgaaca atgaatggga
      901 gatcttcttg gagtcttctt ccactatcga tctttgccca gatgaagatg cttcttcgat
      961 accacagcag caattttctt tcagacctat cagtgagatt gagactgtgg agaataattc
     1021 aatcatagat gtgattggtg ttgtaatgtc agtcgagcca tgtatgccca tcatgagaaa
     1081 gaatggaatg gaaactcaaa aaaggaccat aaacctaaaa gatgagtcag gtagaagcgt
     1141 tgaactaact ctttggggtg aattctgcaa tagggaaggt cagaaacttc aacaactggt
     1201 tgtttcaggt tcttcccctg ttttagctgt gaaagccggt aaagtcaacg acttcagtgg
     1261 aagatctatc gggactgttt catcaactca actattcata gatccagatt ctccagaggc
     1321 taataatcta agacactggt ttgataaagt gggcaggaac attgattctc agtctatctc
     1381 acgagatttg ccaggtggat tgaaaaatga cttacgtaaa accgtgtctc agatcaagga
     1441 tgaaggactc gggagatcaa aaacagattg ggtcactgta aaagcaactg taacttttgt
     1501 taaaacggat aatttctgtt acaccgcctg cccattgaaa gtcggaggag ataaacaatg
     1561 caataagaaa gtagcaagat cagggagctc aaagtggcaa tgtgaccgct gcaaccaaga
     1621 atttgaagaa tgcgattaca gataccttct tcaatgtcaa gtccaagatc atactggatt
     1681 aacatgggtc actgcttttc aagaacctgg tgaaaagatc ttgggctgcc ctgcaaaaga
     1741 tttgtacatg atgaagtacg aagcacgtga tgatgatggg tttgcaaatg tcattaagag
     1801 ccgtctcttt tcagaggtac ttctgaagct gaaaattaat gaagaaccat atggcgaaga
     1861 acaaaggttg aaaataacag ttgtcaaggt agactatgtg aactactctt ctaacaccaa
     1921 gtttctgttg gattcaatcc caaaatctgc atccacattc aaggtaaagt aaaattgatc
     1981 agccaagtcc tgagatttgt ttgatattca gttaaatttg ttacttcaat ttgaaatatg
     2041 actgctgtat gaactgttgc atattactct atatttttct gccattaatt actttgcttt
     2101 aatagtgtgt atgta
//
LOCUS       XM_071886314            1229 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904377), mRNA.
ACCESSION   XM_071886314
VERSION     XM_071886314.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1229
                     /gene="LOC139904377"
                     /note="uncharacterized LOC139904377; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904377"
     CDS             134..1018
                     /gene="LOC139904377"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742415.1"
                     /db_xref="GeneID:139904377"
                     /translation="MDEKNINGASTKPPQRKLKFMPKAPPRREQKLVLPKPEMVEVTE
                     IDDVKAHELMKRFNEASNRPKFKPEIKASKTRVSSFNFGSSGPKSGGAPATTSGIGTK
                     EYKEPWDYYKYYPVTLPLRTPYSGNPELLDEQEFKEDSETNAYIESSLKPAEELGLME
                     EDLEKKLILMQLPPALPLPKESVKTEGGDGIASGSNSSVNSNNNTTGGLFSKGCSLNE
                     LPAGFMGKMLVYKSGAVKLKLGDHLYNVTGGLDCTFAQDVVAINTQEKHCCNIGELNK
                     RAIVTPDIDSILENIKDL"
     misc_feature    623..985
                     /gene="LOC139904377"
                     /note="RNA polymerase III RPC4; Region: RNA_pol_Rpc4;
                     pfam05132"
                     /db_xref="CDD:461558"
ORIGIN      
        1 accactgcag ttgccgccgc cgccgccgcc gttatcatct gttatataaa acactaaaca
       61 gttgtacggc gattttcgac ggagaatcga tagttttcat tactctattg atttaagaaa
      121 ttaatttgtg gtaatggatg agaaaaatat caatggtgct tctacaaaac caccacagag
      181 aaagttgaaa tttatgccca aagcacctcc tcgcagagag caaaagctag ttttacctaa
      241 acctgagatg gttgaggtga ctgaaattga tgatgttaag gcacacgaat tgatgaagcg
      301 cttcaatgaa gcttctaaca ggcctaaatt caaacctgaa attaaggcct caaagacacg
      361 agtttcgtca tttaattttg gttcttctgg gcccaagtct ggaggtgctc ctgctacaac
      421 ctcaggaatc ggaacaaaag aatacaagga accatgggac tattacaagt actatcctgt
      481 tactctacct ctaaggacgc catactcagg aaatccagag cttctggatg aacaagaatt
      541 caaggaggat tcagaaacaa atgcatacat tgagtcgtct ttaaagccag ctgaagagct
      601 tggtttaatg gaggaagact tggaaaaaaa attgattctc atgcaactgc ccccagcttt
      661 gccgctacca aaggaatctg tcaagacaga gggtggtgat gggatagcat cgggttcaaa
      721 ttcatcagtt aatagtaata ataatactac aggaggattg ttttcaaaag ggtgcagttt
      781 gaatgaactt cctgcaggct tcatgggtaa aatgttggtg tataagagcg gtgctgtaaa
      841 gctgaaacta ggagatcatt tgtacaatgt tactggaggt ctagactgta ctttcgctca
      901 agatgttgtt gccatcaata ctcaagagaa gcattgttgc aatatcgggg aactcaataa
      961 gcgtgccatt gttaccccag atatagactc catcttagaa aacatcaagg acttatgata
     1021 caagtttcaa atattgatag acatttttta ctacttacta cctacttatg gaagaaaaag
     1081 aataataaaa ttttgacttg catacatgtt tcagagatat ttttttcccc gaggaacact
     1141 tttacaaact ttgaaattgt aggtgctagc agcagtttat tgagtattac attagcagta
     1201 tagcagttat catactcgtc tatttatcc
//
LOCUS       XR_011778764            1752 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904378), ncRNA.
ACCESSION   XR_011778764
VERSION     XR_011778764.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1752
                     /gene="LOC139904378"
                     /note="uncharacterized LOC139904378; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904378"
     ncRNA           1..1752
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904378"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904378"
ORIGIN      
        1 aatatttttt gttgtctatg gttcatatgg agcttcgctc tattaggcga ggaaacgaag
       61 atcaatttac acaacatcga ttcctaatgt ttctacccct aatttcagtg atcaatcatt
      121 agattaatat aaaaccacca cgatatctca atttcatttt tctctgctgt atgaggaaac
      181 catgaagccc tctagcacga atcttattaa attcactttc aatttcatcc cgaaatgatt
      241 cctaaaataa accatgaagc aatccgtcat atttaaggaa ctcttgattt cggtctccat
      301 caccagctag ttaacgattg aggttgtaaa gtttgaaaga atacaaacac cagtagtggt
      361 ggcaatttgc gctggaaggt tcacaagatg gtgaaacatt gaagaatgaa caaaatatgc
      421 catcaatgag tcatggatgc ccttttatac ctctcaaatg gaggccttct tatgctaaat
      481 ggtgctaaaa aaggtgtaac taagtattat cttggtgatt gtgaccgcgt ttgcagtctc
      541 tctaataaat actaacacca tcacaaatct atatctatat atctatataa aaaagagttt
      601 aaaaaagctg acatgtgatt agcaccttaa ttattgcaaa ttgtgccatg tggaaaatcc
      661 acgtgtctat tcctctatga tcttgaataa ttttattcat aagttaacaa aatttgaatt
      721 tacaagtgga aaaggcgtat ataatcaaaa tgggtgtacc ccatcccttt taacaaacgt
      781 tatctccacc atttttaaca aacacatata acttccattt taaagagata caatctgtat
      841 caaatagttt tttaaagagg tgttattttg atgttgagta aatatggtgc ctttgcaagc
      901 aaacatattt gtatgttgta tttgtggttt ggcatggttg atcacacaaa gagtttagta
      961 ttacaaatta gtaacattaa ttgtttttag ataaattttt tatgagatac tttattatac
     1021 gacttacaat acacatttat ttgtaagtca aaccaaaatt catatagaag ataaaagtta
     1081 tatctatatg taactaattt agaaatagtt tttgagaagt cgtgcaacgc gcgagctcaa
     1141 agcctagtag actatatagc atgcatagat agtgtcagca cgatcaaacc agcatgcact
     1201 ttgaacaaaa caaagaggct catcgacctc atagatctca gtggcaatac aaacagttaa
     1261 cgctgtggaa tgatcatgcc gctgccttcg atgtagctgc ctataaatgt atggagaaac
     1321 cagtaatttt gacagcaaat gcatattggg caatatgatg gtcggagatg aagtttcact
     1381 acacatcatt gttaacccta atgagagcgt agaaaaagga tggttgagga acttcagtca
     1441 aactaagata gttggcggca tagagattgg acatgattgg tgtaaggtac atattcatgc
     1501 gatcattaaa aagggtgaat attttggtta ggccacatta ttcgtttttt aaagttgaag
     1561 atgctacagg cgcgtctatc gcgtggcctt ttgcgttcat atcggcggta accttggatt
     1621 tataaagatg catgctgatc caagacgttt tgcgttgctt ttcattgtct ttactttctt
     1681 tgtcaactgt cattcgaagt cgttatatgt tagattatat atgaattttt tatgtttagt
     1741 gatttttatg tt
//
LOCUS       XR_011778765            2008 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904379), transcript variant X1, ncRNA.
ACCESSION   XR_011778765
VERSION     XR_011778765.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2008
                     /gene="LOC139904379"
                     /note="uncharacterized LOC139904379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904379"
     ncRNA           1..2008
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904379"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904379"
ORIGIN      
        1 cattcagtta ctaacaacaa caaaatttat tgttagtttg aagtgagaaa gtttaaattt
       61 tattaacact tggaatttgt tagatgactt tctcacccta ctgcagatat ggtggaaagg
      121 tcaaaatttc agtattttgg gcaagttagt tttctacaca caagttatgc tatgttatgt
      181 gaaattaaca ttttatattt atatccaagt atgtttcact atatttgagt gtattacata
      241 ggttttttta tttaacattc aggcaatttg gaaatcctca agagcattta aacaggttaa
      301 aagttccctt acacagagtg atagtttctg ttgctgatat ttgcagatgg cattgaaaaa
      361 tggatttcga ctttactagt ctgaccaacc caacctaatc cgacctgttt gacccgacta
      421 atctgactca ccgttgatta ttgttatata cgtaatagtt ttggctggct atctaaaatt
      481 ctgattatga tttccttcat ttgtatttta ccaactaagc gtatgaaata acactttggt
      541 gctgtctatt aaattaattt tttacgcaaa tgattatttt caaactatat attacgaaaa
      601 tatgcaaacg aatctgtttt tttgggtctt ggttgttgta ctaactgtca gggaacggat
      661 tgattgcaca ttcatttcat ggtctggtta ttatacgggt agctaaaaat tcttgtgttt
      721 tgcctttata taattttcat ttcgattttc cacttctgac gggttgcgat gtatagcgaa
      781 ccaaagctgg cattttacat ttacttgtgg tatcccaaaa caaaggtaaa acttctcttt
      841 aatatatcaa ttttgagctt gtatgtctat cctagttgtt ataagctaat aaaagcagag
      901 atcacggtat gtttatgatt tcttctttag accacatatc aagttagttt attgctaaaa
      961 tcctcttatt ttggtccatt tcaatgaagg gtgagaaatt ttaattgttg tatcttcata
     1021 cagtttggta actacatatc gttttataca agtaccattg ttgtatttta taattgaaga
     1081 aagaattaaa tgtataattg ttgtattttt gtaaagtttc attaccctgg ggcctcaatg
     1141 atatggaacc ttacagtttt tttttttctt ttcataggag aaatctagct gcactagctg
     1201 aatcactttt ctttcgttgt tgttgctgct tcactgaata tcttaattcc gtcgtctttc
     1261 caattatcag ataatagtcg acattgtcaa tgtttgtttt aatggtcaat tactaagtgc
     1321 ttctcgacat ttaccatctg ttgcttaaag aaatgaaaca ggaggtagta tatttttata
     1381 cgtaccatcc aactggaggt gtagattgct tagtatggct tggtttggat tgtaaatggt
     1441 gccaggtttg ttggctcggg ttcaacctca aagtatcatt ataagatctt tcgaaaccct
     1501 gaaggtgctg cgacaagtgc attggctgct gctgttacta ctctgaatgt tgtgtaaact
     1561 gggttgcaat gtcagactta cagtagttga taacttcctt ggtggtggga tgcatggtat
     1621 gaggcgttaa agaacatctt tacttaatag aaatcatggc ggatgatgaa gggagatcag
     1681 atgtgaatat acatctggga gataattcag aaggttatat ttctaatcag gcagatatcg
     1741 ttgataatag aaattgggca actgctttgg gtaggatatc aggcctctct tctgcatcac
     1801 atattgtata aaatctcctg ttgttaatta aagtgtgttg gaccatcgat tggtgaaaaa
     1861 gctgcgtcaa gtattaagct gccaacaacc acctttgtag ttatacattt tttgtttcag
     1921 tatttcctcc attcaatatt attctcacac atataagtgt gcatatcttt tttttaggtt
     1981 ggcaagctaa agagtctttt tagtttta
//
LOCUS       XR_011778766            1890 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904379), transcript variant X2, ncRNA.
ACCESSION   XR_011778766
VERSION     XR_011778766.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1890
                     /gene="LOC139904379"
                     /note="uncharacterized LOC139904379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904379"
     ncRNA           1..1890
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904379"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904379"
ORIGIN      
        1 cattcagtta ctaacaacaa caaaatttat tgttagtttg aagtgagaaa gtttaaattt
       61 tattaacact tggaatttgt tagatgactt tctcacccta ctgcagatat ggtggaaagg
      121 tcaaaatttc agtattttgg gcaagcaatt tggaaatcct caagagcatt taaacaggtt
      181 aaaagttccc ttacacagag tgatagtttc tgttgctgat atttgcagat ggcattgaaa
      241 aatggatttc gactttacta gtctgaccaa cccaacctaa tccgacctgt ttgacccgac
      301 taatctgact caccgttgat tattgttata tacgtaatag ttttggctgg ctatctaaaa
      361 ttctgattat gatttccttc atttgtattt taccaactaa gcgtatgaaa taacactttg
      421 gtgctgtcta ttaaattaat tttttacgca aatgattatt ttcaaactat atattacgaa
      481 aatatgcaaa cgaatctgtt tttttgggtc ttggttgttg tactaactgt cagggaacgg
      541 attgattgca cattcatttc atggtctggt tattatacgg gtagctaaaa attcttgtgt
      601 tttgccttta tataattttc atttcgattt tccacttctg acgggttgcg atgtatagcg
      661 aaccaaagct ggcattttac atttacttgt ggtatcccaa aacaaaggta aaacttctct
      721 ttaatatatc aattttgagc ttgtatgtct atcctagttg ttataagcta ataaaagcag
      781 agatcacggt atgtttatga tttcttcttt agaccacata tcaagttagt ttattgctaa
      841 aatcctctta ttttggtcca tttcaatgaa gggtgagaaa ttttaattgt tgtatcttca
      901 tacagtttgg taactacata tcgttttata caagtaccat tgttgtattt tataattgaa
      961 gaaagaatta aatgtataat tgttgtattt ttgtaaagtt tcattaccct ggggcctcaa
     1021 tgatatggaa ccttacagtt tttttttttc ttttcatagg agaaatctag ctgcactagc
     1081 tgaatcactt ttctttcgtt gttgttgctg cttcactgaa tatcttaatt ccgtcgtctt
     1141 tccaattatc agataatagt cgacattgtc aatgtttgtt ttaatggtca attactaagt
     1201 gcttctcgac atttaccatc tgttgcttaa agaaatgaaa caggaggtag tatattttta
     1261 tacgtaccat ccaactggag gtgtagattg cttagtatgg cttggtttgg attgtaaatg
     1321 gtgccaggtt tgttggctcg ggttcaacct caaagtatca ttataagatc tttcgaaacc
     1381 ctgaaggtgc tgcgacaagt gcattggctg ctgctgttac tactctgaat gttgtgtaaa
     1441 ctgggttgca atgtcagact tacagtagtt gataacttcc ttggtggtgg gatgcatggt
     1501 atgaggcgtt aaagaacatc tttacttaat agaaatcatg gcggatgatg aagggagatc
     1561 agatgtgaat atacatctgg gagataattc agaaggttat atttctaatc aggcagatat
     1621 cgttgataat agaaattggg caactgcttt gggtaggata tcaggcctct cttctgcatc
     1681 acatattgta taaaatctcc tgttgttaat taaagtgtgt tggaccatcg attggtgaaa
     1741 aagctgcgtc aagtattaag ctgccaacaa ccacctttgt agttatacat tttttgtttc
     1801 agtatttcct ccattcaata ttattctcac acatataagt gtgcatatct tttttttagg
     1861 ttggcaagct aaagagtctt tttagtttta
//
LOCUS       XR_011778767            1945 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904379), transcript variant X3, ncRNA.
ACCESSION   XR_011778767
VERSION     XR_011778767.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1945
                     /gene="LOC139904379"
                     /note="uncharacterized LOC139904379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904379"
     ncRNA           1..1945
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904379"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904379"
ORIGIN      
        1 cattcagtta ctaacaacaa caaaatttat tgttagtttg aagtgagaaa gtttaaattt
       61 tattaacact tggaatttgt tagatgactt tctcacccta ctgcagatat ggtggaaagg
      121 tcaaaatttc agtattttgg gcaagttagt tttctacaca caagttatgc tatgttatgt
      181 gaaattaaca ttttatattt atatccaagt atgtttcact atatttgagt gtattacata
      241 ggttttttta tttaacattc aggcaatttg gaaatcctca agagcattta aacaggttaa
      301 aagttccctt acacagagtg atagtttctg ttgctgatat ttgcagatgg cattgaaaaa
      361 tggatttcga ctttactagt ctgaccaacc caacctaatc cgacctgttt gacccgacta
      421 atctgactca ccgttgatta ttgttatata cgtaatagtt ttggctggct atctaaaatt
      481 ctgattatga tttccttcat ttgtatttta ccaactaagc gtatgaaata acactttggt
      541 gctgtctatt aaattaattt tttacgcaaa tgattatttt caaactatat attacgaaaa
      601 tatgcaaacg aatctgtttt tttgggtctt ggttgttgta ctaactgtca gggaacggat
      661 tgattgcaca ttcatttcat ggtctggtta ttatacgggt agctaaaaat tcttgtgttt
      721 tgcctttata taattttcat ttcgattttc cacttctgac gggttgcgat gtatagcgaa
      781 ccaaagctgg cattttacat ttacttgtgg tatcccaaaa caaaggtaaa acttctcttt
      841 aatatatcaa ttttgagctt gtatgtctat cctagttgtt ataagctaat aaaagcagag
      901 atcacggtat gtttatgatt tcttctttag accacatatc aagttagttt attgctaaaa
      961 tcctcttatt ttggtccatt tcaatgaagg gtgagaaatt ttaattgttg tatcttcata
     1021 cagtttggta actacatatc gttttataca agtaccattg ttgtatttta taattgaaga
     1081 aagaattaaa tgtataattg ttgtattttt gtaaagtttc attaccctgg ggcctcaatg
     1141 atatggaacc ttacagtttt tttttttctt ttcataggag aaatctagct gcactagctg
     1201 aatcactttt ctttcgttgt tgttgctgct tcactgaata tcttaattcc gtcgtctttc
     1261 caattatcag ataatagtcg acattgtaaa tgaaacagga ggtagtatat ttttatacgt
     1321 accatccaac tggaggtgta gattgcttag tatggcttgg tttggattgt aaatggtgcc
     1381 aggtttgttg gctcgggttc aacctcaaag tatcattata agatctttcg aaaccctgaa
     1441 ggtgctgcga caagtgcatt ggctgctgct gttactactc tgaatgttgt gtaaactggg
     1501 ttgcaatgtc agacttacag tagttgataa cttccttggt ggtgggatgc atggtatgag
     1561 gcgttaaaga acatctttac ttaatagaaa tcatggcgga tgatgaaggg agatcagatg
     1621 tgaatataca tctgggagat aattcagaag gttatatttc taatcaggca gatatcgttg
     1681 ataatagaaa ttgggcaact gctttgggta ggatatcagg cctctcttct gcatcacata
     1741 ttgtataaaa tctcctgttg ttaattaaag tgtgttggac catcgattgg tgaaaaagct
     1801 gcgtcaagta ttaagctgcc aacaaccacc tttgtagtta tacatttttt gtttcagtat
     1861 ttcctccatt caatattatt ctcacacata taagtgtgca tatctttttt ttaggttggc
     1921 aagctaaaga gtctttttag tttta
//
LOCUS       XR_011778768            1657 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904379), transcript variant X4, ncRNA.
ACCESSION   XR_011778768
VERSION     XR_011778768.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1657
                     /gene="LOC139904379"
                     /note="uncharacterized LOC139904379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904379"
     ncRNA           1..1657
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904379"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904379"
ORIGIN      
        1 tcattcagtt actaacaaca acaaaattta ttgttagttt gaagtgagaa agtttaaatt
       61 ttattaacac ttggaatttg ttagatgact ttctcaccct actgcagata tggtggaaag
      121 gtcaaaattt cagtattttg ggcaagttag ttttctacac acaagttatg ctatgttatg
      181 tgaaattaac attttatatt tatatccaag tatgtttcac tatatttgag tgtattacat
      241 aggttttttt atttaacatt caggcaattt ggaaatcctc aagagcattt aaacaggtta
      301 aaagttccct tacacagagt gatagtttct gttgctgata tttgcagatg gcattgaaaa
      361 atggatttcg actttactag tctgaccaac ccaacctaat ccgacctgtt tgacccgact
      421 aatctgactc accgttgatt attgttatat acgtaatagt tttggctggc tatctaaaat
      481 tctgattatg atttccttca tttgtatttt accaactaag cgtatgaaat aacactttgg
      541 tgctgtctat taaattaatt ttttacgcaa atgattattt tcaaactata tattacgaaa
      601 atatgcaaac gaatctgttt ttttgggtct tggttgttgt actaactgtc agggaacgga
      661 ttgattgcac attcatttca tggtctggtt attatacggg tagctaaaaa ttcttgtgtt
      721 ttgcctttat ataattttca tttcgatttt ccacttctga cgggttgcga tgtatagcga
      781 accaaagctg gcattttaca tttacttgtg gtatcccaaa acaaaggaga aatctagctg
      841 cactagctga atcacttttc tttcgttgtt gttgctgctt cactgaatat cttaattccg
      901 tcgtctttcc aattatcaga taatagtcga cattgtcaat gtttgtttta atggtcaatt
      961 actaagtgct tctcgacatt taccatctgt tgcttaaaga aatgaaacag gaggtagtat
     1021 atttttatac gtaccatcca actggaggtg tagattgctt agtatggctt ggtttggatt
     1081 gtaaatggtg ccaggtttgt tggctcgggt tcaacctcaa agtatcatta taagatcttt
     1141 cgaaaccctg aaggtgctgc gacaagtgca ttggctgctg ctgttactac tctgaatgtt
     1201 gtgtaaactg ggttgcaatg tcagacttac agtagttgat aacttccttg gtggtgggat
     1261 gcatggtatg aggcgttaaa gaacatcttt acttaataga aatcatggcg gatgatgaag
     1321 ggagatcaga tgtgaatata catctgggag ataattcaga aggttatatt tctaatcagg
     1381 cagatatcgt tgataataga aattgggcaa ctgctttggg taggatatca ggcctctctt
     1441 ctgcatcaca tattgtataa aatctcctgt tgttaattaa agtgtgttgg accatcgatt
     1501 ggtgaaaaag ctgcgtcaag tattaagctg ccaacaacca cctttgtagt tatacatttt
     1561 ttgtttcagt atttcctcca ttcaatatta ttctcacaca tataagtgtg catatctttt
     1621 ttttaggttg gcaagctaaa gagtcttttt agtttta
//
LOCUS       XR_011778769            1594 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904379), transcript variant X5, ncRNA.
ACCESSION   XR_011778769
VERSION     XR_011778769.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1594
                     /gene="LOC139904379"
                     /note="uncharacterized LOC139904379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904379"
     ncRNA           1..1594
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904379"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904379"
ORIGIN      
        1 tcattcagtt actaacaaca acaaaattta ttgttagttt gaagtgagaa agtttaaatt
       61 ttattaacac ttggaatttg ttagatgact ttctcaccct actgcagata tggtggaaag
      121 gtcaaaattt cagtattttg ggcaagttag ttttctacac acaagttatg ctatgttatg
      181 tgaaattaac attttatatt tatatccaag tatgtttcac tatatttgag tgtattacat
      241 aggttttttt atttaacatt caggcaattt ggaaatcctc aagagcattt aaacaggtta
      301 aaagttccct tacacagagt gatagtttct gttgctgata tttgcagatg gcattgaaaa
      361 atggatttcg actttactag tctgaccaac ccaacctaat ccgacctgtt tgacccgact
      421 aatctgactc accgttgatt attgttatat acgtaatagt tttggctggc tatctaaaat
      481 tctgattatg atttccttca tttgtatttt accaactaag cgtatgaaat aacactttgg
      541 tgctgtctat taaattaatt ttttacgcaa atgattattt tcaaactata tattacgaaa
      601 atatgcaaac gaatctgttt ttttgggtct tggttgttgt actaactgtc agggaacgga
      661 ttgattgcac attcatttca tggtctggtt attatacggg tagctaaaaa ttcttgtgtt
      721 ttgcctttat ataattttca tttcgatttt ccacttctga cgggttgcga tgtatagcga
      781 accaaagctg gcattttaca tttacttgtg gtatcccaaa acaaaggaga aatctagctg
      841 cactagctga atcacttttc tttcgttgtt gttgctgctt cactgaatat cttaattccg
      901 tcgtctttcc aattatcaga taatagtcga cattgtaaat gaaacaggag gtagtatatt
      961 tttatacgta ccatccaact ggaggtgtag attgcttagt atggcttggt ttggattgta
     1021 aatggtgcca ggtttgttgg ctcgggttca acctcaaagt atcattataa gatctttcga
     1081 aaccctgaag gtgctgcgac aagtgcattg gctgctgctg ttactactct gaatgttgtg
     1141 taaactgggt tgcaatgtca gacttacagt agttgataac ttccttggtg gtgggatgca
     1201 tggtatgagg cgttaaagaa catctttact taatagaaat catggcggat gatgaaggga
     1261 gatcagatgt gaatatacat ctgggagata attcagaagg ttatatttct aatcaggcag
     1321 atatcgttga taatagaaat tgggcaactg ctttgggtag gatatcaggc ctctcttctg
     1381 catcacatat tgtataaaat ctcctgttgt taattaaagt gtgttggacc atcgattggt
     1441 gaaaaagctg cgtcaagtat taagctgcca acaaccacct ttgtagttat acattttttg
     1501 tttcagtatt tcctccattc aatattattc tcacacatat aagtgtgcat atcttttttt
     1561 taggttggca agctaaagag tctttttagt ttta
//
LOCUS       XR_011778770            2013 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904379), transcript variant X6, ncRNA.
ACCESSION   XR_011778770
VERSION     XR_011778770.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2013
                     /gene="LOC139904379"
                     /note="uncharacterized LOC139904379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904379"
     ncRNA           1..2013
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904379"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904379"
ORIGIN      
        1 ctcattcagt tactaacaac aacaaaattt attgttagtt tgaagtgaga aagtttaaat
       61 tttattaaca cttggaattt gttagatgac tttctcaccc tactgcagat atggtggaaa
      121 ggtcaaaatt tcagtatttt gggcaagtta gttttctaca cacaagttat gctatgttat
      181 gtgaaattaa cattttatat ttatatccaa gtatgtttca ctatatttga gtgtattaca
      241 taggtttttt tatttaacat tcaggcaatt tggaaatcct caagagcatt taaacaggtt
      301 aaaagttccc ttacacagag tgatagtttc tgttgctgat atttgcagat ggcattgaaa
      361 aatggatttc gactttacta gtctgaccaa cccaacctaa tccgacctgt ttgacccgac
      421 taatctgact caccgttgat tattgttata tacgtaatag ttttggctgg ctatctaaaa
      481 ttctgattat gatttccttc atttgtattt taccaactaa gcgtatgaaa taacactttg
      541 gtgctgtcta ttaaattaat tttttacgca aatgattatt ttcaaactat atattacgaa
      601 aatatgcaaa cgaatctgtt tttttgggtc ttggttgttg tactaactgt cagggaacgg
      661 attgattgca cattcatttc atggtctggt tattatacgg gtagctaaaa attcttgtgt
      721 tttgccttta tataattttc atttcgattt tccacttctg acgggttgcg atgtatagcg
      781 aaccaaagct ggcattttac atttacttgt ggtatcccaa aacaaaggta aaacttctct
      841 ttaatatatc aattttgagc ttgtatgtct atcctagttg ttataagcta ataaaagcag
      901 agatcacggt atgtttatga tttcttcttt agaccacata tcaagttagt ttattgctaa
      961 aatcctctta ttttggtcca tttcaatgaa gggtgagaaa ttttaattgt tgtatcttca
     1021 tacagtttgg taactacata tcgttttata caagtaccat tgttgtattt tataattgaa
     1081 gaaagaatta aatgtataat tgttgtattt ttgtaaagtt tcattaccct ggggcctcaa
     1141 tgatatggaa ccttacagtt tttttttttc ttttcatagg agaaatctag ctgcactagc
     1201 tgaatcactt ttctttcgtt gttgttgctg cttcactgaa tatcttaatt ccgtcgtctt
     1261 tccaattatc agataatagt cgacattgtc aatgtttgtt ttaatggtca attactaagt
     1321 gcttctcgac atttaccatc tgttgcttaa agaaatgaaa caggaggtag tatattttta
     1381 tacgtaccat ccaactggag gtgtagattg cttagtatgg cttggtttgg attgtaaatg
     1441 gtgccaggtt tgttggctcg ggttcaacct caaagtatca ttataagatc tttcgaaacc
     1501 ctgaaggtgc tgcgacaagt gcattggctg ctgctgttac tactctgaat gttgtgtaaa
     1561 ctgggttgca atgtcaggta acttacagta gttgataact tccttggtgg tgggatgcat
     1621 ggtatgaggc gttaaagaac atctttactt aatagaaatc atggcggatg atgaagggag
     1681 atcagatgtg aatatacatc tgggagataa ttcagaaggt tatatttcta atcaggcaga
     1741 tatcgttgat aatagaaatt gggcaactgc tttgggtagg atatcaggcc tctcttctgc
     1801 atcacatatt gtataaaatc tcctgttgtt aattaaagtg tgttggacca tcgattggtg
     1861 aaaaagctgc gtcaagtatt aagctgccaa caaccacctt tgtagttata cattttttgt
     1921 ttcagtattt cctccattca atattattct cacacatata agtgtgcata tctttttttt
     1981 aggttggcaa gctaaagagt ctttttagtt tta
//
LOCUS       XM_071886315            2767 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ROOT HAIR DEFECTIVE
            3-like (LOC139904380), mRNA.
ACCESSION   XM_071886315
VERSION     XM_071886315.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2767
                     /gene="LOC139904380"
                     /note="protein ROOT HAIR DEFECTIVE 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139904380"
     CDS             1..2439
                     /gene="LOC139904380"
                     /codon_start=1
                     /product="protein ROOT HAIR DEFECTIVE 3-like"
                     /protein_id="XP_071742416.1"
                     /db_xref="GeneID:139904380"
                     /translation="MNVDKEAGCCSTHLIEGDGTFNAEGLDNFIKQVRMAECGLSYAV
                     VAIMGPQSSGKSTLLNNLFHTNFREMDAYRGRSQTTKGIWMARCVGIEPCTIVMDLEG
                     TDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMLRL
                     FSPRKTTLTFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPEAHKQTPLSDFFNVEVV
                     ALSSYEEKEEQFKEQVASLRERFFQSIAPNGLAGDRRGVVPASGFSYSAQQIWEVIKE
                     NKDLDLPAHKVMVATVRCEEIANEKYSLFVTNQDWCDLEEAVQSHIVPGFGRKLSSMI
                     DTSLSSYDEEATYFEDGVRTAKRRQLEEKLIQLVQPTYQLMLEHLQLETLDKFKKALH
                     DALIGGHGFANAARDCRGSFIGVFDEQCKDAAIKQADWDSSKLRDKFSRDIDSHISEV
                     RTAKLSELNALYESKLKEALDGPVGALLEGGGDDTWPAIRKLFQHETKVAVSEFSVAL
                     SGFEMDEQSNEAMLSKLENYARGIVEGKTKEEAGKALYRMKERFTSLFNHDSDSMPRI
                     WTGKEDIRTITKTARSSSLKLLSVLAAIRLDVDDDKIGDTLVVALVDRKKDTSKSIST
                     QDPLASSTWEEVPATKTLITPVQCKSLWSQFQRETEYTITQAIASQEANKRNNNWLPP
                     PWAIAALVILGFNEFMTLLRNPLWLLVLFVGYLVSKALWVQLDITVEFRNGMLPGILS
                     LSTKILPTVTNLLRKLAEEGQKPVATDSQRNTSNTSQVSATYQGVASSTASSNVTLEN
                     GTEYTSLSRHVKEQ"
     misc_feature    142..849
                     /gene="LOC139904380"
                     /note="Root hair defective 3 GTP-binding protein (RHD3)
                     GTPase domain; Region: RHD3_GTPase; pfam05879"
                     /db_xref="CDD:461768"
     misc_feature    970..2277
                     /gene="LOC139904380"
                     /note="Sey1 three-helix bundle domain; Region: Sey1_3HB;
                     pfam20428"
                     /db_xref="CDD:466577"
     polyA_site      2767
                     /gene="LOC139904380"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgaatgtag ataaagaagc tggttgctgt tcaacacacc ttatagaagg agatggtact
       61 tttaatgcgg aaggacttga caattttatc aagcaagtta gaatggccga gtgtgggctt
      121 tcttatgctg tcgttgccat catgggacct caaagtagtg gaaagagcac acttctgaac
      181 aatctttttc acaccaactt cagagaaatg gatgcttata ggggaaggtc tcaaaccact
      241 aaaggtatat ggatggcaag atgtgttggt attgaacctt gcactatagt gatggatctc
      301 gagggcactg atggaagaga acggggagag gatgatactg catttgagaa gcagagtgcg
      361 ctttttgcgc ttgctgtttc agatatagtt cttataaaca tgtggtgtca tgatatcggg
      421 cgtgagcagg ctgcaaacaa acctcttctg aaaactgtat ttcaggttat gttgcgacta
      481 tttagtccac gtaagacaac attaacgttt gttatacgtg ataaaacaag gacacctctt
      541 gaaaatctcg agcctgtttt gagggaagat attcaaaaga tatgggattc tgttcccaaa
      601 ccggaagccc acaaacagac tccactaagt gattttttta atgtagaagt tgttgccctt
      661 tctagctatg aagaaaaaga agaacaattc aaggagcagg tagctagttt gagggaaagg
      721 ttcttccaat ctattgcacc taatgggctt gcgggagata ggaggggggt tgttccagct
      781 tcaggatttt cttatagtgc ccaacaaatt tgggaagtta ttaaggagaa caaagacctt
      841 gatttgcctg ctcacaaggt gatggtggcc actgtaagat gtgaagaaat tgctaacgag
      901 aaatactctt tatttgtaac aaaccaggac tggtgtgatt tagaagaagc tgtacaatct
      961 catatagtgc ccggctttgg aaggaagcta agttcaatga ttgacacctc tttatccagt
     1021 tatgatgaag aggctactta ctttgaagat ggagtgagaa ctgctaagcg aaggcagttg
     1081 gaagagaagt tgattcaact tgttcaaccg acctatcaat tgatgctgga acacctacaa
     1141 ttagagacac ttgataaatt caagaaagcg cttcatgatg ctttgattgg aggacacggg
     1201 tttgcaaatg ctgctcgcga ttgcagagga tcattcatcg gagtatttga tgagcaatgc
     1261 aaagatgccg ctatcaaaca ggctgattgg gattcgtcta aactaaggga taaattttca
     1321 cgtgatatag attcacatat ttctgaagtt cgaactgcca agctttccga acttaatgca
     1381 ctttatgagt cgaaattaaa agaggcactg gatggacctg ttggagccct actagaagga
     1441 ggtggcgatg atacctggcc cgcaataagg aaactatttc aacatgagac taaagtagct
     1501 gtctctgagt tttctgttgc actttctggt tttgaaatgg acgaacaatc taatgaggcg
     1561 atgctttcaa aattagaaaa ttatgctaga gggatagttg aagggaaaac aaaagaagaa
     1621 gcgggcaaag ctctttaccg tatgaaagag agatttacat ccctgttcaa tcacgatagt
     1681 gattccatgc cacgaatctg gactggaaag gaagatatta ggacaattac caaaacagct
     1741 cggtcttctt ctttgaagtt gctctctgta ttggctgcaa ttcgtttgga tgtggatgat
     1801 gataagattg gggacacatt agttgttgca ttagtggatc gcaaaaagga cacgagcaag
     1861 agtatctcca cgcaggatcc gttggcttcc agcacatggg aagaggttcc agcaacgaag
     1921 acactcataa ctcccgttca atgcaaatca ttgtggagcc aatttcaacg agagactgag
     1981 tatactatta cacaagctat tgcttctcag gaagctaata agcgcaataa caactggtta
     2041 ccacctccat gggctatagc tgccttggtg atcttgggat ttaatgaatt tatgactctt
     2101 ttaaggaacc cattgtggct acttgtttta tttgtgggtt atctcgtttc caaagctttg
     2161 tgggtccaac tagacataac tgttgaattt cgcaacggca tgcttccagg aattttgtct
     2221 ttatctacaa agattcttcc taccgtcaca aaccttcttc ggaaacttgc agaagaaggc
     2281 caaaaacccg ttgccactga ttctcaaaga aacacctcaa acacgtctca agtatcagcg
     2341 acttatcaag gagtagcttc ttcaacggca tcgtctaatg tgaccttgga aaacggaacc
     2401 gaatacacga gtctctccag acatgtcaaa gaacagtaga ttcatgccat gccgtattaa
     2461 aaacatgctc tcatctgaca aatatgatta ttgggtttta tactactata ggttgcacaa
     2521 gggataatta ttaggcgtca tattttgtgc cgagttgttg taatggtcat gaatacagaa
     2581 agaccgaaca tgttgctaga attggcccgt ttagggtctc ccattatttt tcaggatcca
     2641 catatcacgg ttttcatttg ttggggcatg caactttctt tttggtcatg ttacatgttg
     2701 tgttttttgt ttgtataatg tagacatgac tgaaaaagag atgttatacg agtaatattt
     2761 ttgatta
//
LOCUS       XM_071886316             760 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein LURP-one-related
            6-like (LOC139904381), mRNA.
ACCESSION   XM_071886316
VERSION     XM_071886316.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..760
                     /gene="LOC139904381"
                     /note="protein LURP-one-related 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904381"
     CDS             36..680
                     /gene="LOC139904381"
                     /codon_start=1
                     /product="protein LURP-one-related 6-like"
                     /protein_id="XP_071742417.1"
                     /db_xref="GeneID:139904381"
                     /translation="MLSKKKGSKKMGTKVIMREMAVVSKMFCSSSEVVLRVRTRPHVV
                     GGGGFVVTDLHTHEVVFKVDGVVGKKDHITLTDAYQTPLLLIRRKGGIVEALSLDKQW
                     RGYTSNYVGSQKLVFTLKDPKPGITNRPVRVSIEQNNNNFYCRNLQIRGYFPDRDCNI
                     VDSSGNVIAQVEVIKEMKQMMEKKDVYQVVVKPGIDQALVVGIIAVLDYIQKGC"
     misc_feature    93..653
                     /gene="LOC139904381"
                     /note="LURP-one-related; Region: LOR; cl02043"
                     /db_xref="CDD:470445"
     polyA_site      760
                     /gene="LOC139904381"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaatattcgt cttacctcaa aattaactac attacatgtt gtcaaagaaa aaaggttcga
       61 aaaaaatggg tacaaaagta ataatgaggg agatggcggt agtaagcaag atgttttgtt
      121 catcaagtga ggtggttcta agggtacgaa cacgccctca cgttgttggt ggcggcggct
      181 ttgtggttac tgatttgcat acccatgagg ttgtattcaa ggtcgatggt gttgttggca
      241 aaaaggatca catcactctc accgatgcct accaaacacc gttgcttctc atccgtagaa
      301 agggagggat tgttgaagct ttaagcctgg ataaacaatg gcgaggctac acctcaaact
      361 atgtaggatc ccaaaagctg gtttttacat tgaaagatcc aaaacctggc atcaccaata
      421 gacccgtcag ggtttcaatt gaacaaaaca acaacaactt ctactgcaga aaccttcaaa
      481 taaggggtta ctttccggat agagattgca acatcgtcga ctctagcggc aatgtcatag
      541 cccaggttga ggtgattaaa gaaatgaaac aaatgatgga gaagaaagat gtttatcaag
      601 tggtggtgaa accagggatt gatcaagcgc ttgtggtggg tatcattgcg gttcttgatt
      661 acatccaaaa aggatgttaa tatattaatt aatgaaattt cagtttcaat ttagattcga
      721 tttcaattta aattttaatt ccaattccaa tttcatttca
//
LOCUS       XR_011778771            2625 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904382), transcript variant X1, ncRNA.
ACCESSION   XR_011778771
VERSION     XR_011778771.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2625
                     /gene="LOC139904382"
                     /note="uncharacterized LOC139904382; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904382"
     ncRNA           1..2625
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904382"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904382"
ORIGIN      
        1 caatccttaa gtactcctta atcaaattag ctgacgtgtc aattgcttaa tccaccacta
       61 attaagtgac taattacgtg tgcctgttta tttagggctt agtaagcaaa gccgcttcag
      121 tgaaactgtc atccacaaat aaaaaatgcg tacggcaaaa ttcagaggac cacccgccgc
      181 tgctaccacc gccttcgcag tcgccgctac catcgccgga gccactgctg caaccaccaa
      241 aattgccgct gctgcctctt agggtttttg aggataaaat caacaacgat gatactaatt
      301 tatcaattcc tgaatttccg tgatcataat tagaaggcca gtcgatggtt catcatacag
      361 attcaagttt tttaatgcag catgcaacaa acttgcaatc tgacgatgaa ggttatacat
      421 ggttaattgg tacactatcg ccacgatcgt tcagtcggag caccatatgc gtcatcatca
      481 tgtcttacaa ggtagtttcc tgagtgaatg ttataattta atttgtccga tcaacttaat
      541 atgcttactt tgcattatcg aatgcaatat ggtgctttgt atcaattcga gtttagccat
      601 ctattacata taacctgcat ttgtttagag taaaattata gatagccatt tgtaagtgat
      661 gatgatgttt taattaattt ggaatggccc ggtagctcta aatgaaatcc gagttgtaac
      721 ctatgattgg aatggcctgg tagctctaaa gtggttgtcg aacccgactt aatgcttgct
      781 ttaatggtag ttgttccact atcagatgct atctgatcat ctgatcttga gtgcctcttg
      841 cctcttcagt tgtatacttg tatgggttgt gtttgccacc tggcccatca ttcttcttga
      901 gttccaatgt tcgtatggat tgtgtttgtc acctgaccca ttttccatct cgtgttcatg
      961 tgttttatgt gttggtttta cgctttccat gtcgtgttct gttagttttc gtgtaatctt
     1021 cattggctgg tagttgcctg tatgatacat tgtacatatt ccttttgctt attaataaca
     1081 tatcttggct tttttaaaat aaaaaaaaat tgggtttttt ttgttactta tatggaatag
     1141 atataggtat acatagaaat tatagataca gatgtagttt agtagatata tatattgacg
     1201 tatcgaatta tagatttgtc cgttatagtt caaatctatc tatgatgtcc attggttaga
     1261 gttaggaact tatcacacct caaagtctat atacagtttc aaaattgaca tgaattacgg
     1321 ttctgattgc tttgatcaag ggcaacaatc atttaagttt tgaatattta ttatcctctt
     1381 ttgtttaaag ttgtattttc ccaaattcta acatatgatc ctttgaatac tgacaatgca
     1441 ttcggatcat aataatgtaa agctaagact accatttttt ttttgtatgg tctctttttg
     1501 gatgttatgt cagtcgtttt attggctatt ataaatttga tattttgttc ccaacaacaa
     1561 atagagcaca aaataagata ggtgtcatgg tcagagtaac taaagattga aatttggtaa
     1621 tttgataata aactgtttat acttttctgt aggtggtata aagtaataca aagttatcat
     1681 gaaccagctc cttcactttt ccactgctac tgaggagctc aaaaaaggga aaatgttaga
     1741 tataaactaa gagttattat tttatatcac taaataaaat tgatgaatca tgaatctaag
     1801 ttaaaaatat aactcttcat ataattctta taatcttggt tttcagtctg aattatatta
     1861 tagaactcat ctaatttgct caatttgttc tacagttttt agtatgtaat ataaaatttt
     1921 acctcagaat gggtgcgagt atggctagct ttttatgtta tatggtacgt ttgaaaagca
     1981 gtataagttg taatcatgga tggatcgaat ggacaaacct cttatcttac acatttgagg
     2041 tacacttaag tagttgtcta ttttgtttac ttgagtagtt gaaactaaaa cagttggctt
     2101 tgctatggat gtacaggctc actattaacg taccaagaac gagtaaagtt caagtccact
     2161 tggtgagagt gatgacactg ataatacatt agggaagtct gaggcttcat tcatggatca
     2221 gccatcaagg aataaggtaa agaaacttat aaaacaaggg ctagccagtt aaggtgagat
     2281 tttcattaca tatatatata tctttcagtt tcatcttgca tgatttttcc ttcgtcaggt
     2341 acgttcattg ttcacggttg ctcattattt cttaaagacg cgaaccatga aaacgaattc
     2401 acgtgattga tattctaaat atgattatgg tttttgtatg gaatccattt gattggcaac
     2461 ttcttgcaat ctggtctttt gtgttaactg ggtttcgctt gcagtcgcct aaattgacac
     2521 aaaattaatg cagccacaat tcatagctgt ctttaaacct ttagagtggg ccatatcaaa
     2581 tttcaatatg tttgtttaat atgaactcca aaagttctat aacat
//
LOCUS       XR_011778772            2548 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904382), transcript variant X2, ncRNA.
ACCESSION   XR_011778772
VERSION     XR_011778772.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2548
                     /gene="LOC139904382"
                     /note="uncharacterized LOC139904382; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904382"
     ncRNA           1..2548
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904382"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904382"
ORIGIN      
        1 caatccttaa gtactcctta atcaaattag ctgacgtgtc aattgcttaa tccaccacta
       61 attaagtgac taattacgtg tgcctgttta tttagggctt agtaagcaaa gccgcttcag
      121 tgaaactgtc atccacaaat aaaaaatgcg tacggcaaaa ttcagaggac cacccgccgc
      181 tgctaccacc gccttcgcag tcgccgctac catcgccgga gccactgctg caaccaccaa
      241 aattgccgct gctgcctctt agggtttttg aggataaaat caacaacgat gatactaatt
      301 tatcaattcc tgaatttccg tgatcataat tagaaggcca gtcgatggtt catcatacag
      361 attcaagttt tttaatgcag catgcaacaa acttgcaatc tgacgatgaa ggttatacat
      421 ggttaattgg tacactatcg ccacgatcgt tcagtcggag caccatatgc gtcatcatca
      481 tgtcttacaa ggtagtttcc tgagtgaatg ttataattta atttgtccga tcaacttaat
      541 atgcttactt tgcattatcg aatgcaatat ggtgctttgt atcaattcga gtttagccat
      601 ctattacata taacctgcat ttgtttagag taaaattata gatagccatt tgtaagtgat
      661 gatgatgttt taattaattt ggaatggccc ggtagctcta aatgaaatcc gagttgtaac
      721 ctatgattgg aatggcctgg tagctctaaa gtggttgtcg aacccgactt aatgcttgct
      781 ttaatggtag ttgttccact atcagatgct atctgatcat ctgatcttga gtgcctcttg
      841 cctcttcagt tgtatacttg tatgggttgt gtttgccacc tggcccatca ttcttcttga
      901 gttccaatgt tcgtatggat tgtgtttgtc acctgaccca ttttccatct cgtgttcatg
      961 tgttttatgt gttggtttta cgctttccat gtcgtgttct gttagttttc gtgtaatctt
     1021 cattggctgg tagttgcctg tatgatacat tgtacatatt ccttttgctt attaataaca
     1081 tatcttggct tttttaaaat aaaaaaaaat tgggtttttt ttgttactta tatggaatag
     1141 atataggtat acatagaaat tatagataca gatgtagttt agtagatata tatattgacg
     1201 tatcgaatta tagatttgtc cgttatagtt caaatctatc tatgatgtcc attggttaga
     1261 gttaggaact tatcacacct caaagtctat atacagtttc aaaattgaca tgaattacgg
     1321 ttctgattgc tttgatcaag ggcaacaatc atttaagttt tgaatattta ttatcctctt
     1381 ttgtttaaag ttgtattttc ccaaattcta acatatgatc ctttgaatac tgacaatgca
     1441 ttcggatcat aataatgtaa agctaagact accatttttt ttttgtatgg tctctttttg
     1501 gatgttatgt cagtcgtttt attggctatt ataaatttga tattttgttc ccaacaacaa
     1561 atagagcaca aaataagata ggtgtcatgg tcagagtaac taaagattga aatttggtaa
     1621 tttgataata aactgtttat acttttctgt aggtggtata aagtaataca aagttatcat
     1681 gaaccagctc cttcactttt ccactgctac tgaggagctc aaaaaaggga aaatgttaga
     1741 tataaactaa gagttattat tttatatcac taaataaaat tgatgaatca tgaatctaag
     1801 ttaaaaatat aactcttcat ataattctta taatcttggt tttcagtctg aattatatta
     1861 tagaactcat ctaatttgct caatttgttc tacagttttt agtatgtaat ataaaatttt
     1921 acctcagaat gggtgcgagt atggctagct ttttatgtta tatggtacgt ttgaaaagca
     1981 gtataagttg taatcatgga tggatcgaat ggacaaacct cttatcttac acatttgagg
     2041 ctcactatta acgtaccaag aacgagtaaa gttcaagtcc acttggtgag agtgatgaca
     2101 ctgataatac attagggaag tctgaggctt cattcatgga tcagccatca aggaataagg
     2161 taaagaaact tataaaacaa gggctagcca gttaaggtga gattttcatt acatatatat
     2221 atatctttca gtttcatctt gcatgatttt tccttcgtca ggtacgttca ttgttcacgg
     2281 ttgctcatta tttcttaaag acgcgaacca tgaaaacgaa ttcacgtgat tgatattcta
     2341 aatatgatta tggtttttgt atggaatcca tttgattggc aacttcttgc aatctggtct
     2401 tttgtgttaa ctgggtttcg cttgcagtcg cctaaattga cacaaaatta atgcagccac
     2461 aattcatagc tgtctttaaa cctttagagt gggccatatc aaatttcaat atgtttgttt
     2521 aatatgaact ccaaaagttc tataacat
//
LOCUS       XR_011778773            1464 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904382), transcript variant X3, ncRNA.
ACCESSION   XR_011778773
VERSION     XR_011778773.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1464
                     /gene="LOC139904382"
                     /note="uncharacterized LOC139904382; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904382"
     ncRNA           1..1464
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904382"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904382"
ORIGIN      
        1 caatccttaa gtactcctta atcaaattag ctgacgtgtc aattgcttaa tccaccacta
       61 attaagtgac taattacgtg tgcctgttta tttagggctt agtaagcaaa gccgcttcag
      121 tgaaactgtc atccacaaat aaaaaatgcg tacggcaaaa ttcagaggac cacccgccgc
      181 tgctaccacc gccttcgcag tcgccgctac catcgccgga gccactgctg caaccaccaa
      241 aattgccgct gctgcctctt agggtttttg aggataaaat caacaacgat gatactaatt
      301 tatcaattcc tgaatttccg tgatcataat tagaaggcca gtcgatggtt catcatacag
      361 attcaagttt tttaatgcag catgcaacaa acttgcaatc tgacgatgaa ggttatacat
      421 ggttaattgg tacactatcg ccacgatcgt tcagtcggag caccatatgc gtcatcatca
      481 tgtcttacaa ggtggtataa agtaatacaa agttatcatg aaccagctcc ttcacttttc
      541 cactgctact gaggagctca aaaaagggaa aatgttagat ataaactaag agttattatt
      601 ttatatcact aaataaaatt gatgaatcat gaatctaagt taaaaatata actcttcata
      661 taattcttat aatcttggtt ttcagtctga attatattat agaactcatc taatttgctc
      721 aatttgttct acagttttta gtatgtaata taaaatttta cctcagaatg ggtgcgagta
      781 tggctagctt tttatgttat atggtacgtt tgaaaagcag tataagttgt aatcatggat
      841 ggatcgaatg gacaaacctc ttatcttaca catttgaggt acacttaagt agttgtctat
      901 tttgtttact tgagtagttg aaactaaaac agttggcttt gctatggatg tacaggctca
      961 ctattaacgt accaagaacg agtaaagttc aagtccactt ggtgagagtg atgacactga
     1021 taatacatta gggaagtctg aggcttcatt catggatcag ccatcaagga ataaggtaaa
     1081 gaaacttata aaacaagggc tagccagtta aggtgagatt ttcattacat atatatatat
     1141 ctttcagttt catcttgcat gatttttcct tcgtcaggta cgttcattgt tcacggttgc
     1201 tcattatttc ttaaagacgc gaaccatgaa aacgaattca cgtgattgat attctaaata
     1261 tgattatggt ttttgtatgg aatccatttg attggcaact tcttgcaatc tggtcttttg
     1321 tgttaactgg gtttcgcttg cagtcgccta aattgacaca aaattaatgc agccacaatt
     1381 catagctgtc tttaaacctt tagagtgggc catatcaaat ttcaatatgt ttgtttaata
     1441 tgaactccaa aagttctata acat
//
LOCUS       XR_011778774            2635 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904382), transcript variant X4, ncRNA.
ACCESSION   XR_011778774
VERSION     XR_011778774.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2635
                     /gene="LOC139904382"
                     /note="uncharacterized LOC139904382; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904382"
     ncRNA           1..2635
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904382"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904382"
ORIGIN      
        1 caatccttaa gtactcctta atcaaattag ctgacgtgtc aattgcttaa tccaccacta
       61 attaagtgac taattacgtg tgcctgttta tttagggctt agtaagcaaa gccgcttcag
      121 tgaaactgtc atccacaaat aaaaaatgcg tacggcaaaa ttcagaggac cacccgccgc
      181 tgctaccacc gccttcgcag tcgccgctac catcgccgga gccactgctg caaccaccaa
      241 aattgccgct gctgcctctt agggtttttg agttgattgc aggataaaat caacaacgat
      301 gatactaatt tatcaattcc tgaatttccg tgatcataat tagaaggcca gtcgatggtt
      361 catcatacag attcaagttt tttaatgcag catgcaacaa acttgcaatc tgacgatgaa
      421 ggttatacat ggttaattgg tacactatcg ccacgatcgt tcagtcggag caccatatgc
      481 gtcatcatca tgtcttacaa ggtagtttcc tgagtgaatg ttataattta atttgtccga
      541 tcaacttaat atgcttactt tgcattatcg aatgcaatat ggtgctttgt atcaattcga
      601 gtttagccat ctattacata taacctgcat ttgtttagag taaaattata gatagccatt
      661 tgtaagtgat gatgatgttt taattaattt ggaatggccc ggtagctcta aatgaaatcc
      721 gagttgtaac ctatgattgg aatggcctgg tagctctaaa gtggttgtcg aacccgactt
      781 aatgcttgct ttaatggtag ttgttccact atcagatgct atctgatcat ctgatcttga
      841 gtgcctcttg cctcttcagt tgtatacttg tatgggttgt gtttgccacc tggcccatca
      901 ttcttcttga gttccaatgt tcgtatggat tgtgtttgtc acctgaccca ttttccatct
      961 cgtgttcatg tgttttatgt gttggtttta cgctttccat gtcgtgttct gttagttttc
     1021 gtgtaatctt cattggctgg tagttgcctg tatgatacat tgtacatatt ccttttgctt
     1081 attaataaca tatcttggct tttttaaaat aaaaaaaaat tgggtttttt ttgttactta
     1141 tatggaatag atataggtat acatagaaat tatagataca gatgtagttt agtagatata
     1201 tatattgacg tatcgaatta tagatttgtc cgttatagtt caaatctatc tatgatgtcc
     1261 attggttaga gttaggaact tatcacacct caaagtctat atacagtttc aaaattgaca
     1321 tgaattacgg ttctgattgc tttgatcaag ggcaacaatc atttaagttt tgaatattta
     1381 ttatcctctt ttgtttaaag ttgtattttc ccaaattcta acatatgatc ctttgaatac
     1441 tgacaatgca ttcggatcat aataatgtaa agctaagact accatttttt ttttgtatgg
     1501 tctctttttg gatgttatgt cagtcgtttt attggctatt ataaatttga tattttgttc
     1561 ccaacaacaa atagagcaca aaataagata ggtgtcatgg tcagagtaac taaagattga
     1621 aatttggtaa tttgataata aactgtttat acttttctgt aggtggtata aagtaataca
     1681 aagttatcat gaaccagctc cttcactttt ccactgctac tgaggagctc aaaaaaggga
     1741 aaatgttaga tataaactaa gagttattat tttatatcac taaataaaat tgatgaatca
     1801 tgaatctaag ttaaaaatat aactcttcat ataattctta taatcttggt tttcagtctg
     1861 aattatatta tagaactcat ctaatttgct caatttgttc tacagttttt agtatgtaat
     1921 ataaaatttt acctcagaat gggtgcgagt atggctagct ttttatgtta tatggtacgt
     1981 ttgaaaagca gtataagttg taatcatgga tggatcgaat ggacaaacct cttatcttac
     2041 acatttgagg tacacttaag tagttgtcta ttttgtttac ttgagtagtt gaaactaaaa
     2101 cagttggctt tgctatggat gtacaggctc actattaacg taccaagaac gagtaaagtt
     2161 caagtccact tggtgagagt gatgacactg ataatacatt agggaagtct gaggcttcat
     2221 tcatggatca gccatcaagg aataaggtaa agaaacttat aaaacaaggg ctagccagtt
     2281 aaggtgagat tttcattaca tatatatata tctttcagtt tcatcttgca tgatttttcc
     2341 ttcgtcaggt acgttcattg ttcacggttg ctcattattt cttaaagacg cgaaccatga
     2401 aaacgaattc acgtgattga tattctaaat atgattatgg tttttgtatg gaatccattt
     2461 gattggcaac ttcttgcaat ctggtctttt gtgttaactg ggtttcgctt gcagtcgcct
     2521 aaattgacac aaaattaatg cagccacaat tcatagctgt ctttaaacct ttagagtggg
     2581 ccatatcaaa tttcaatatg tttgtttaat atgaactcca aaagttctat aacat
//
LOCUS       XR_011778775            2551 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904382), transcript variant X5, ncRNA.
ACCESSION   XR_011778775
VERSION     XR_011778775.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2551
                     /gene="LOC139904382"
                     /note="uncharacterized LOC139904382; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904382"
     ncRNA           1..2551
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904382"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139904382"
ORIGIN      
        1 caatccttaa gtactcctta atcaaattag ctgacgtgtc aattgcttaa tccaccacta
       61 attaagtgac taattacgtg tgcctgttta tttagggctt agtaagcaaa gccgcttcag
      121 tgaaactgtc atccacaaat aaaaaatgcg tacggcaaaa ttcagaggac cacccgccgc
      181 tgctaccacc gccttcgcag tcgccgctac catcgccgga gccactgctg caaccaccaa
      241 aattgccgct gctgcctctt agggtttttg aggataaaat caacaacgat gatactaatt
      301 tatcaattcc tgaatttccg tgatcataat tagaaggcca gtcgatggtt catcatacag
      361 attcaagttt tttaatgcag catgcaacaa acttgcaatc tgacgatgaa ggttatacat
      421 ggttaattgg tacactatcg ccacgatcgt tcagtcggag caccatatgc gtcatcatca
      481 tgtcttacaa ggtagtttcc tgagtgaatg ttataattta atttgtccga tcaacttaat
      541 atgcttactt tgcattatcg aatgcaatat ggtgctttgt atcaattcga gtttagccat
      601 ctattacata taacctgcat ttgtttagag taaaattata gatagccatt tgtaagtgat
      661 gatgatgttt taattaattt ggaatggccc ggtagctcta aatgaaatcc gagttgtaac
      721 ctatgattgg aatggcctgg tagctctaaa gtggttgtcg aacccgactt aatgcttgct
      781 ttaatggtag ttgttccact atcagatgct atctgatcat ctgatcttga gtgcctcttg
      841 cctcttcagt tgtatacttg tatgggttgt gtttgccacc tggcccatca ttcttcttga
      901 gttccaatgt tcgtatggat tgtgtttgtc acctgaccca ttttccatct cgtgttcatg
      961 tgttttatgt gttggtttta cgctttccat gtcgtgttct gttagttttc gtgtaatctt
     1021 cattggctgg tagttgcctg tatgatacat tgtacatatt ccttttgctt attaataaca
     1081 tatcttggct tttttaaaat aaaaaaaaat tgggtttttt ttgttactta tatggaatag
     1141 atataggtat acatagaaat tatagataca gatgtagttt agtagatata tatattgacg
     1201 tatcgaatta tagatttgtc cgttatagtt caaatctatc tatgatgtcc attggttaga
     1261 gttaggaact tatcacacct caaagtctat atacagtttc aaaattgaca tgaattacgg
     1321 ttctgattgc tttgatcaag ggcaacaatc atttaagttt tgaatattta ttatcctctt
     1381 ttgtttaaag ttgtattttc ccaaattcta acatatgatc ctttgaatac tgacaatgca
     1441 ttcggatcat aataatgtaa agctaagact accatttttt ttttgtatgg tctctttttg
     1501 gatgttatgt cagtcgtttt attggctatt ataaatttga tattttgttc ccaacaacaa
     1561 atagagcaca aaataagata ggtgtcatgg tcagagtaac taaagattga aatttggtaa
     1621 tttgataata aactgtttat acttttctgt aggtggtata aagtaataca aagttatcat
     1681 gaaccagctc cttcactttt ccactgctac tgaggagctc aaaaaaggga aaatgttaga
     1741 tataaactaa gagttattat tttatatcac taaataaaat tgatgaatca tgaatctaag
     1801 ttaaaaatat aactcttcat ataattctta taatcttggt tttcagtctg aattatatta
     1861 tagaactcat ctaatttgct caatttgttc tacagttttt agtatgtaat ataaaatttt
     1921 acctcagaat gggtgcgagt atggctagct ttttatgtta tatggtacgt ttgaaaagca
     1981 gtataagttg taatcatgga tggatcgaat ggacaaacct cttatcttac acatttgagg
     2041 ctcactatta acgtaccaag aacgagtaaa gttcaagtcc acttggtgag agtgatgaca
     2101 ctgataatac attagggaag tctgaggctt cattcatgga tcagccatca aggaataagg
     2161 tggtaaagaa acttataaaa caagggctag ccagttaagg tgagattttc attacatata
     2221 tatatatctt tcagtttcat cttgcatgat ttttccttcg tcaggtacgt tcattgttca
     2281 cggttgctca ttatttctta aagacgcgaa ccatgaaaac gaattcacgt gattgatatt
     2341 ctaaatatga ttatggtttt tgtatggaat ccatttgatt ggcaacttct tgcaatctgg
     2401 tcttttgtgt taactgggtt tcgcttgcag tcgcctaaat tgacacaaaa ttaatgcagc
     2461 cacaattcat agctgtcttt aaacctttag agtgggccat atcaaatttc aatatgtttg
     2521 tttaatatga actccaaaag ttctataaca t
//
LOCUS       XM_071886317            2470 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904383), transcript variant X1, mRNA.
ACCESSION   XM_071886317
VERSION     XM_071886317.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2470
                     /gene="LOC139904383"
                     /note="uncharacterized LOC139904383; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904383"
     CDS             161..2461
                     /gene="LOC139904383"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742418.1"
                     /db_xref="GeneID:139904383"
                     /translation="MSSSDEFTRGVEDGIRLSKRVYLGKDRSVAPPKPITQMHKSSSF
                     YYYPTSPMVYAVIYNPGIVDNPDVPSYQPHVHGRCDPPALIPLQMNGIDIQADCYLDT
                     AFLTMNASWRLHCVMSSATSECRLAIPMPPGLQGSILGVEVQVTRKSYNTQLVVMDEN
                     PETSTTTTTLAKPQDGGFLKPHIFTLTIPQVDGGSNLSVKVRWSQKISYRDGDFTLHI
                     PFTFPEYVTPPGKKLSKKEKIQLNVNIGLGTQVVCRTASHPLKEQKREVGKLAFLYEA
                     EVLTWSTIDFVFTYSVPTSSSFGGIFLQSPSSLGSIDQREMFSLYLFPPGLSKKKKVI
                     KKEVLFVVDISGSMKGMTIEATKSAVVAALSKLDQGDSFSIMAFNDQTYLYSSTLELV
                     TKQSLEKATNWIAMNFIAGGGTDMSIALNQAIEMLSGAKKSLPIIFFVTDGAVENERQ
                     ICEVMIKQLEYQGGSNLCPRIYTFGIGSFCNHYFLRMLAMIGRGHYEAASDPESIVAQ
                     MEALFSRAASTVLMNISIDGLDDLDALEVYPSVVPDICSEGPLIIFGHYRGGFPDTLK
                     ARGILAAEDMSDITIDLKVHRAKDVPLDKVLAKQQIEQYTTQAWFLQDKKLEEKVAKV
                     SMQTGVVSEYTRMILLETVQDKQATSSDIKQGKKETNTQKMEKSSAAMIKVLQPLGVG
                     FGNLIATIENIPPGYEPKLPDQAEMLVRAAGNCCVNLCGKCCCLCCIQVCSKMNDQCA
                     ILVTQFCGSLAFLGCFVCCEMCCGSD"
     misc_feature    1169..1687
                     /gene="LOC139904383"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cl00057"
                     /db_xref="CDD:469594"
     misc_feature    order(1187..1189,1394..1396,1484..1486)
                     /gene="LOC139904383"
                     /note="metal ion-dependent adhesion site (MIDAS); other
                     site"
                     /db_xref="CDD:238738"
ORIGIN      
        1 attaaagttg gaaggagaga agaccgacag ctaggtgatt ctgatatcat ttcattttgc
       61 attccccaaa aacgtcggcc atcaaaaacc ctctttaatt cacattcatt cattttcata
      121 atcaaaatca aaatcaaaat caaaatttaa atttaaattt atgtcttctt ccgatgaatt
      181 tactagaggc gttgaagacg gcatccggct gtccaaacgt gtttacttgg gtaaagaccg
      241 atcggtagcg ccgccaaaac ctataactca aatgcataaa tcatcatcat tttattacta
      301 cccgacttca ccaatggttt acgccgttat ctataatcca gggatagtcg ataatccaga
      361 cgtccctagc tatcagcctc acgtgcacgg cagatgtgat ccccctgcct tgattcccct
      421 tcagatgaac ggaattgata ttcaggccga ctgttatctc gacaccgcgt tccttaccat
      481 gaacgcttct tggagacttc attgtgttat gtcaagtgcc acctctgaat gtcgtctcgc
      541 tattcctatg ccgcctggtc tgcagggttc aattctaggt gtagaggttc aagttaccag
      601 aaaatcgtat aacacgcagt tagttgtcat ggatgaaaac cctgaaactt ctactacaac
      661 tactactcta gccaaacctc aagacggagg ctttctcaaa cctcacatat ttaccttgac
      721 aataccacag gttgatggtg gttcaaatct ttcagtcaaa gtaagatggt ctcagaaaat
      781 tagttataga gatggagact tcacgttaca cattcctttc actttccctg agtatgttac
      841 tcctcccgga aagaaactct caaaaaagga aaagatacaa ctcaatgtca acattggctt
      901 gggcacacag gttgtctgtc gaacagctag tcatccactc aaggagcaaa agcgggaagt
      961 aggaaaactg gcctttttgt atgaagcaga agttcttaca tggtcaacta ttgattttgt
     1021 gtttacgtac tctgttccta caagcagttc atttggtggt atatttttgc agtctccatc
     1081 atcactaggt agtatagacc aaagggagat gttttctttg tacctgtttc cacctggtct
     1141 cagcaaaaag aagaaggtta ttaagaagga agtacttttt gttgtggata taagtggaag
     1201 catgaaggga atgacaattg aggctacaaa aagcgcggtt gttgcagcac tgtcaaaact
     1261 ggatcaagga gattcattta gtataatggc atttaatgac cagacttact tgtattcatc
     1321 aaccttggag ttggtaacca aacaatcgct tgaaaaagca accaattgga tcgccatgaa
     1381 tttcattgct ggtggcggta ctgacatgtc aatcgctctc aatcaggcca tagaaatgtt
     1441 gtctggggcc aaaaaatcac ttccaatcat cttctttgtg actgacgggg ctgttgaaaa
     1501 tgagagacaa atttgtgaag ttatgatcaa acaactagaa tatcaaggag gatcaaatct
     1561 gtgtccgcga atatacactt ttggtatagg ttcgttctgc aatcactact ttttgcgaat
     1621 gcttgcgatg attggcagag gacattatga ggctgcatct gatccagagt cgattgtagc
     1681 tcaaatggaa gctttgtttt ctagagctgc ttctacggtt ttgatgaaca tttccattga
     1741 tggtctggac gatcttgatg ctcttgaggt ttatccttca gttgttccag atatatgttc
     1801 tgaagggcca ctgatcatat ttgggcatta caggggtggt tttcctgaca cgctgaaagc
     1861 tagaggtatc ctagcagcag aagatatgag tgacatcact attgacctga aggtgcaccg
     1921 agcaaaagac gtacctcttg acaaggtctt ggcaaaacaa caaattgaac aatacacaac
     1981 gcaagcatgg tttttacaag ataaaaagct tgaggagaag gtagcaaaag tcagcatgca
     2041 gactggtgtt gttagcgagt atacacgtat gatcttgctg gaaacagttc aagataagca
     2101 agctacgtca tctgacataa aacagggtaa aaaagaaacg aatactcaga aaatggaaaa
     2161 atcttctgct gctatgataa aagtgttgca gccgttgggt gtaggatttg gcaacttgat
     2221 tgcaacaatt gagaacatcc ctccgggtta cgaaccaaaa ttaccagacc aagcagaaat
     2281 gttggttaga gcagctggca actgttgtgt aaatctatgt ggcaagtgct gttgtctgtg
     2341 ctgcattcaa gtctgttcaa agatgaacga ccaatgtgca attcttgtca cacagttttg
     2401 tggttccttg gcctttttag gctgttttgt ctgctgtgaa atgtgctgtg gctcagactg
     2461 actgactgac
//
LOCUS       XM_071886318            2468 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904383), transcript variant X2, mRNA.
ACCESSION   XM_071886318
VERSION     XM_071886318.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2468
                     /gene="LOC139904383"
                     /note="uncharacterized LOC139904383; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904383"
     CDS             162..2459
                     /gene="LOC139904383"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742419.1"
                     /db_xref="GeneID:139904383"
                     /translation="MSSSDEFTRGVEDGIRLSKRVYLGKDRSVAPPKPITQMHKSSSF
                     YYYPTSPMVYAVIYNPGIVDNPDVPSYQPHVHGRCDPPALIPLQMNGIDIQADCYLDT
                     AFLTMNASWRLHCVMSSATSECRLAIPMPPGLQGSILGVEVQVTRKSYNTQLVVMDEN
                     PETSTTTTTLAKPQDGGFLKPHIFTLTIPQVDGGSNLSVKVRWSQKISYRDGDFTLHI
                     PFTFPEYVTPPGKKLSKKEKIQLNVNIGLGTQVVCRTASHPLKEQKREVGKLAFLYEA
                     EVLTWSTIDFVFTYSVPTSSSFGGIFLQSPSSLGSIDQREMFSLYLFPPGLSKKKVIK
                     KEVLFVVDISGSMKGMTIEATKSAVVAALSKLDQGDSFSIMAFNDQTYLYSSTLELVT
                     KQSLEKATNWIAMNFIAGGGTDMSIALNQAIEMLSGAKKSLPIIFFVTDGAVENERQI
                     CEVMIKQLEYQGGSNLCPRIYTFGIGSFCNHYFLRMLAMIGRGHYEAASDPESIVAQM
                     EALFSRAASTVLMNISIDGLDDLDALEVYPSVVPDICSEGPLIIFGHYRGGFPDTLKA
                     RGILAAEDMSDITIDLKVHRAKDVPLDKVLAKQQIEQYTTQAWFLQDKKLEEKVAKVS
                     MQTGVVSEYTRMILLETVQDKQATSSDIKQGKKETNTQKMEKSSAAMIKVLQPLGVGF
                     GNLIATIENIPPGYEPKLPDQAEMLVRAAGNCCVNLCGKCCCLCCIQVCSKMNDQCAI
                     LVTQFCGSLAFLGCFVCCEMCCGSD"
     misc_feature    1158..1685
                     /gene="LOC139904383"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cl00057"
                     /db_xref="CDD:469594"
     misc_feature    order(1185..1187,1392..1394,1482..1484)
                     /gene="LOC139904383"
                     /note="metal ion-dependent adhesion site (MIDAS); other
                     site"
                     /db_xref="CDD:238738"
ORIGIN      
        1 aattaaagtt ggaaggagag aagaccgaca gctaggtgat tctgatatca tttcattttg
       61 cattccccaa aaacgtcggc catcaaaaac cctctttaat tcacattcat tcattttcat
      121 aatcaaaatc aaaatcaaaa tcaaaattta aatttaaatt tatgtcttct tccgatgaat
      181 ttactagagg cgttgaagac ggcatccggc tgtccaaacg tgtttacttg ggtaaagacc
      241 gatcggtagc gccgccaaaa cctataactc aaatgcataa atcatcatca ttttattact
      301 acccgacttc accaatggtt tacgccgtta tctataatcc agggatagtc gataatccag
      361 acgtccctag ctatcagcct cacgtgcacg gcagatgtga tccccctgcc ttgattcccc
      421 ttcagatgaa cggaattgat attcaggccg actgttatct cgacaccgcg ttccttacca
      481 tgaacgcttc ttggagactt cattgtgtta tgtcaagtgc cacctctgaa tgtcgtctcg
      541 ctattcctat gccgcctggt ctgcagggtt caattctagg tgtagaggtt caagttacca
      601 gaaaatcgta taacacgcag ttagttgtca tggatgaaaa ccctgaaact tctactacaa
      661 ctactactct agccaaacct caagacggag gctttctcaa acctcacata tttaccttga
      721 caataccaca ggttgatggt ggttcaaatc tttcagtcaa agtaagatgg tctcagaaaa
      781 ttagttatag agatggagac ttcacgttac acattccttt cactttccct gagtatgtta
      841 ctcctcccgg aaagaaactc tcaaaaaagg aaaagataca actcaatgtc aacattggct
      901 tgggcacaca ggttgtctgt cgaacagcta gtcatccact caaggagcaa aagcgggaag
      961 taggaaaact ggcctttttg tatgaagcag aagttcttac atggtcaact attgattttg
     1021 tgtttacgta ctctgttcct acaagcagtt catttggtgg tatatttttg cagtctccat
     1081 catcactagg tagtatagac caaagggaga tgttttcttt gtacctgttt ccacctggtc
     1141 tcagcaaaaa gaaggttatt aagaaggaag tactttttgt tgtggatata agtggaagca
     1201 tgaagggaat gacaattgag gctacaaaaa gcgcggttgt tgcagcactg tcaaaactgg
     1261 atcaaggaga ttcatttagt ataatggcat ttaatgacca gacttacttg tattcatcaa
     1321 ccttggagtt ggtaaccaaa caatcgcttg aaaaagcaac caattggatc gccatgaatt
     1381 tcattgctgg tggcggtact gacatgtcaa tcgctctcaa tcaggccata gaaatgttgt
     1441 ctggggccaa aaaatcactt ccaatcatct tctttgtgac tgacggggct gttgaaaatg
     1501 agagacaaat ttgtgaagtt atgatcaaac aactagaata tcaaggagga tcaaatctgt
     1561 gtccgcgaat atacactttt ggtataggtt cgttctgcaa tcactacttt ttgcgaatgc
     1621 ttgcgatgat tggcagagga cattatgagg ctgcatctga tccagagtcg attgtagctc
     1681 aaatggaagc tttgttttct agagctgctt ctacggtttt gatgaacatt tccattgatg
     1741 gtctggacga tcttgatgct cttgaggttt atccttcagt tgttccagat atatgttctg
     1801 aagggccact gatcatattt gggcattaca ggggtggttt tcctgacacg ctgaaagcta
     1861 gaggtatcct agcagcagaa gatatgagtg acatcactat tgacctgaag gtgcaccgag
     1921 caaaagacgt acctcttgac aaggtcttgg caaaacaaca aattgaacaa tacacaacgc
     1981 aagcatggtt tttacaagat aaaaagcttg aggagaaggt agcaaaagtc agcatgcaga
     2041 ctggtgttgt tagcgagtat acacgtatga tcttgctgga aacagttcaa gataagcaag
     2101 ctacgtcatc tgacataaaa cagggtaaaa aagaaacgaa tactcagaaa atggaaaaat
     2161 cttctgctgc tatgataaaa gtgttgcagc cgttgggtgt aggatttggc aacttgattg
     2221 caacaattga gaacatccct ccgggttacg aaccaaaatt accagaccaa gcagaaatgt
     2281 tggttagagc agctggcaac tgttgtgtaa atctatgtgg caagtgctgt tgtctgtgct
     2341 gcattcaagt ctgttcaaag atgaacgacc aatgtgcaat tcttgtcaca cagttttgtg
     2401 gttccttggc ctttttaggc tgttttgtct gctgtgaaat gtgctgtggc tcagactgac
     2461 tgactgac
//
LOCUS       XM_071886319            2432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904383), transcript variant X3, mRNA.
ACCESSION   XM_071886319
VERSION     XM_071886319.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2432
                     /gene="LOC139904383"
                     /note="uncharacterized LOC139904383; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904383"
     CDS             162..2423
                     /gene="LOC139904383"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742420.1"
                     /db_xref="GeneID:139904383"
                     /translation="MSSSDEFTRGVEDGIRLSKRVYLGKDRSVAPPKPITQMHKSSSF
                     YYYPTSPMVYAVIYNPGIVDNPDVPSYQPHVHGRCDPPALIPLQMNGIDIQADCYLDT
                     AFLTMNASWRLHCVMSSATSECRLAIPMPPGLQGSILGVEVQVTRKSYNTQLVVMDEN
                     PETSTTTTTLAKPQDGGFLKPHIFTLTIPQVDGGSNLSVKVRWSQKISYRDGDFTLHI
                     PFTFPEYVTPPGKKLSKKEKIQLNVNIGLGTQVVCRTASHPLKEQKREVGKLAFLYEA
                     EVLTWSTIDFVFTYSSPSSLGSIDQREMFSLYLFPPGLSKKKKVIKKEVLFVVDISGS
                     MKGMTIEATKSAVVAALSKLDQGDSFSIMAFNDQTYLYSSTLELVTKQSLEKATNWIA
                     MNFIAGGGTDMSIALNQAIEMLSGAKKSLPIIFFVTDGAVENERQICEVMIKQLEYQG
                     GSNLCPRIYTFGIGSFCNHYFLRMLAMIGRGHYEAASDPESIVAQMEALFSRAASTVL
                     MNISIDGLDDLDALEVYPSVVPDICSEGPLIIFGHYRGGFPDTLKARGILAAEDMSDI
                     TIDLKVHRAKDVPLDKVLAKQQIEQYTTQAWFLQDKKLEEKVAKVSMQTGVVSEYTRM
                     ILLETVQDKQATSSDIKQGKKETNTQKMEKSSAAMIKVLQPLGVGFGNLIATIENIPP
                     GYEPKLPDQAEMLVRAAGNCCVNLCGKCCCLCCIQVCSKMNDQCAILVTQFCGSLAFL
                     GCFVCCEMCCGSD"
     misc_feature    1131..1649
                     /gene="LOC139904383"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cl00057"
                     /db_xref="CDD:469594"
     misc_feature    order(1149..1151,1356..1358,1446..1448)
                     /gene="LOC139904383"
                     /note="metal ion-dependent adhesion site (MIDAS); other
                     site"
                     /db_xref="CDD:238738"
ORIGIN      
        1 aattaaagtt ggaaggagag aagaccgaca gctaggtgat tctgatatca tttcattttg
       61 cattccccaa aaacgtcggc catcaaaaac cctctttaat tcacattcat tcattttcat
      121 aatcaaaatc aaaatcaaaa tcaaaattta aatttaaatt tatgtcttct tccgatgaat
      181 ttactagagg cgttgaagac ggcatccggc tgtccaaacg tgtttacttg ggtaaagacc
      241 gatcggtagc gccgccaaaa cctataactc aaatgcataa atcatcatca ttttattact
      301 acccgacttc accaatggtt tacgccgtta tctataatcc agggatagtc gataatccag
      361 acgtccctag ctatcagcct cacgtgcacg gcagatgtga tccccctgcc ttgattcccc
      421 ttcagatgaa cggaattgat attcaggccg actgttatct cgacaccgcg ttccttacca
      481 tgaacgcttc ttggagactt cattgtgtta tgtcaagtgc cacctctgaa tgtcgtctcg
      541 ctattcctat gccgcctggt ctgcagggtt caattctagg tgtagaggtt caagttacca
      601 gaaaatcgta taacacgcag ttagttgtca tggatgaaaa ccctgaaact tctactacaa
      661 ctactactct agccaaacct caagacggag gctttctcaa acctcacata tttaccttga
      721 caataccaca ggttgatggt ggttcaaatc tttcagtcaa agtaagatgg tctcagaaaa
      781 ttagttatag agatggagac ttcacgttac acattccttt cactttccct gagtatgtta
      841 ctcctcccgg aaagaaactc tcaaaaaagg aaaagataca actcaatgtc aacattggct
      901 tgggcacaca ggttgtctgt cgaacagcta gtcatccact caaggagcaa aagcgggaag
      961 taggaaaact ggcctttttg tatgaagcag aagttcttac atggtcaact attgattttg
     1021 tgtttacgta ctcttctcca tcatcactag gtagtataga ccaaagggag atgttttctt
     1081 tgtacctgtt tccacctggt ctcagcaaaa agaagaaggt tattaagaag gaagtacttt
     1141 ttgttgtgga tataagtgga agcatgaagg gaatgacaat tgaggctaca aaaagcgcgg
     1201 ttgttgcagc actgtcaaaa ctggatcaag gagattcatt tagtataatg gcatttaatg
     1261 accagactta cttgtattca tcaaccttgg agttggtaac caaacaatcg cttgaaaaag
     1321 caaccaattg gatcgccatg aatttcattg ctggtggcgg tactgacatg tcaatcgctc
     1381 tcaatcaggc catagaaatg ttgtctgggg ccaaaaaatc acttccaatc atcttctttg
     1441 tgactgacgg ggctgttgaa aatgagagac aaatttgtga agttatgatc aaacaactag
     1501 aatatcaagg aggatcaaat ctgtgtccgc gaatatacac ttttggtata ggttcgttct
     1561 gcaatcacta ctttttgcga atgcttgcga tgattggcag aggacattat gaggctgcat
     1621 ctgatccaga gtcgattgta gctcaaatgg aagctttgtt ttctagagct gcttctacgg
     1681 ttttgatgaa catttccatt gatggtctgg acgatcttga tgctcttgag gtttatcctt
     1741 cagttgttcc agatatatgt tctgaagggc cactgatcat atttgggcat tacaggggtg
     1801 gttttcctga cacgctgaaa gctagaggta tcctagcagc agaagatatg agtgacatca
     1861 ctattgacct gaaggtgcac cgagcaaaag acgtacctct tgacaaggtc ttggcaaaac
     1921 aacaaattga acaatacaca acgcaagcat ggtttttaca agataaaaag cttgaggaga
     1981 aggtagcaaa agtcagcatg cagactggtg ttgttagcga gtatacacgt atgatcttgc
     2041 tggaaacagt tcaagataag caagctacgt catctgacat aaaacagggt aaaaaagaaa
     2101 cgaatactca gaaaatggaa aaatcttctg ctgctatgat aaaagtgttg cagccgttgg
     2161 gtgtaggatt tggcaacttg attgcaacaa ttgagaacat ccctccgggt tacgaaccaa
     2221 aattaccaga ccaagcagaa atgttggtta gagcagctgg caactgttgt gtaaatctat
     2281 gtggcaagtg ctgttgtctg tgctgcattc aagtctgttc aaagatgaac gaccaatgtg
     2341 caattcttgt cacacagttt tgtggttcct tggccttttt aggctgtttt gtctgctgtg
     2401 aaatgtgctg tggctcagac tgactgactg ac
//
LOCUS       XM_071886320            2430 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904383), transcript variant X4, mRNA.
ACCESSION   XM_071886320
VERSION     XM_071886320.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2430
                     /gene="LOC139904383"
                     /note="uncharacterized LOC139904383; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904383"
     CDS             163..2421
                     /gene="LOC139904383"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071742421.1"
                     /db_xref="GeneID:139904383"
                     /translation="MSSSDEFTRGVEDGIRLSKRVYLGKDRSVAPPKPITQMHKSSSF
                     YYYPTSPMVYAVIYNPGIVDNPDVPSYQPHVHGRCDPPALIPLQMNGIDIQADCYLDT
                     AFLTMNASWRLHCVMSSATSECRLAIPMPPGLQGSILGVEVQVTRKSYNTQLVVMDEN
                     PETSTTTTTLAKPQDGGFLKPHIFTLTIPQVDGGSNLSVKVRWSQKISYRDGDFTLHI
                     PFTFPEYVTPPGKKLSKKEKIQLNVNIGLGTQVVCRTASHPLKEQKREVGKLAFLYEA
                     EVLTWSTIDFVFTYSSPSSLGSIDQREMFSLYLFPPGLSKKKVIKKEVLFVVDISGSM
                     KGMTIEATKSAVVAALSKLDQGDSFSIMAFNDQTYLYSSTLELVTKQSLEKATNWIAM
                     NFIAGGGTDMSIALNQAIEMLSGAKKSLPIIFFVTDGAVENERQICEVMIKQLEYQGG
                     SNLCPRIYTFGIGSFCNHYFLRMLAMIGRGHYEAASDPESIVAQMEALFSRAASTVLM
                     NISIDGLDDLDALEVYPSVVPDICSEGPLIIFGHYRGGFPDTLKARGILAAEDMSDIT
                     IDLKVHRAKDVPLDKVLAKQQIEQYTTQAWFLQDKKLEEKVAKVSMQTGVVSEYTRMI
                     LLETVQDKQATSSDIKQGKKETNTQKMEKSSAAMIKVLQPLGVGFGNLIATIENIPPG
                     YEPKLPDQAEMLVRAAGNCCVNLCGKCCCLCCIQVCSKMNDQCAILVTQFCGSLAFLG
                     CFVCCEMCCGSD"
     misc_feature    1120..1647
                     /gene="LOC139904383"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cl00057"
                     /db_xref="CDD:469594"
     misc_feature    order(1147..1149,1354..1356,1444..1446)
                     /gene="LOC139904383"
                     /note="metal ion-dependent adhesion site (MIDAS); other
                     site"
                     /db_xref="CDD:238738"
ORIGIN      
        1 aaattaaagt tggaaggaga gaagaccgac agctaggtga ttctgatatc atttcatttt
       61 gcattcccca aaaacgtcgg ccatcaaaaa ccctctttaa ttcacattca ttcattttca
      121 taatcaaaat caaaatcaaa atcaaaattt aaatttaaat ttatgtcttc ttccgatgaa
      181 tttactagag gcgttgaaga cggcatccgg ctgtccaaac gtgtttactt gggtaaagac
      241 cgatcggtag cgccgccaaa acctataact caaatgcata aatcatcatc attttattac
      301 tacccgactt caccaatggt ttacgccgtt atctataatc cagggatagt cgataatcca
      361 gacgtcccta gctatcagcc tcacgtgcac ggcagatgtg atccccctgc cttgattccc
      421 cttcagatga acggaattga tattcaggcc gactgttatc tcgacaccgc gttccttacc
      481 atgaacgctt cttggagact tcattgtgtt atgtcaagtg ccacctctga atgtcgtctc
      541 gctattccta tgccgcctgg tctgcagggt tcaattctag gtgtagaggt tcaagttacc
      601 agaaaatcgt ataacacgca gttagttgtc atggatgaaa accctgaaac ttctactaca
      661 actactactc tagccaaacc tcaagacgga ggctttctca aacctcacat atttaccttg
      721 acaataccac aggttgatgg tggttcaaat ctttcagtca aagtaagatg gtctcagaaa
      781 attagttata gagatggaga cttcacgtta cacattcctt tcactttccc tgagtatgtt
      841 actcctcccg gaaagaaact ctcaaaaaag gaaaagatac aactcaatgt caacattggc
      901 ttgggcacac aggttgtctg tcgaacagct agtcatccac tcaaggagca aaagcgggaa
      961 gtaggaaaac tggccttttt gtatgaagca gaagttctta catggtcaac tattgatttt
     1021 gtgtttacgt actcttctcc atcatcacta ggtagtatag accaaaggga gatgttttct
     1081 ttgtacctgt ttccacctgg tctcagcaaa aagaaggtta ttaagaagga agtacttttt
     1141 gttgtggata taagtggaag catgaaggga atgacaattg aggctacaaa aagcgcggtt
     1201 gttgcagcac tgtcaaaact ggatcaagga gattcattta gtataatggc atttaatgac
     1261 cagacttact tgtattcatc aaccttggag ttggtaacca aacaatcgct tgaaaaagca
     1321 accaattgga tcgccatgaa tttcattgct ggtggcggta ctgacatgtc aatcgctctc
     1381 aatcaggcca tagaaatgtt gtctggggcc aaaaaatcac ttccaatcat cttctttgtg
     1441 actgacgggg ctgttgaaaa tgagagacaa atttgtgaag ttatgatcaa acaactagaa
     1501 tatcaaggag gatcaaatct gtgtccgcga atatacactt ttggtatagg ttcgttctgc
     1561 aatcactact ttttgcgaat gcttgcgatg attggcagag gacattatga ggctgcatct
     1621 gatccagagt cgattgtagc tcaaatggaa gctttgtttt ctagagctgc ttctacggtt
     1681 ttgatgaaca tttccattga tggtctggac gatcttgatg ctcttgaggt ttatccttca
     1741 gttgttccag atatatgttc tgaagggcca ctgatcatat ttgggcatta caggggtggt
     1801 tttcctgaca cgctgaaagc tagaggtatc ctagcagcag aagatatgag tgacatcact
     1861 attgacctga aggtgcaccg agcaaaagac gtacctcttg acaaggtctt ggcaaaacaa
     1921 caaattgaac aatacacaac gcaagcatgg tttttacaag ataaaaagct tgaggagaag
     1981 gtagcaaaag tcagcatgca gactggtgtt gttagcgagt atacacgtat gatcttgctg
     2041 gaaacagttc aagataagca agctacgtca tctgacataa aacagggtaa aaaagaaacg
     2101 aatactcaga aaatggaaaa atcttctgct gctatgataa aagtgttgca gccgttgggt
     2161 gtaggatttg gcaacttgat tgcaacaatt gagaacatcc ctccgggtta cgaaccaaaa
     2221 ttaccagacc aagcagaaat gttggttaga gcagctggca actgttgtgt aaatctatgt
     2281 ggcaagtgct gttgtctgtg ctgcattcaa gtctgttcaa agatgaacga ccaatgtgca
     2341 attcttgtca cacagttttg tggttccttg gcctttttag gctgttttgt ctgctgtgaa
     2401 atgtgctgtg gctcagactg actgactgac
//
LOCUS       XM_071886321            2061 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904383), transcript variant X5, mRNA.
ACCESSION   XM_071886321
VERSION     XM_071886321.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2061
                     /gene="LOC139904383"
                     /note="uncharacterized LOC139904383; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904383"
     CDS             133..2052
                     /gene="LOC139904383"
                     /codon_start=1
                     /product="uncharacterized protein isoform X5"
                     /protein_id="XP_071742422.1"
                     /db_xref="GeneID:139904383"
                     /translation="MSSRYSYAAWSAGVEVQVTRKSYNTQLVVMDENPETSTTTTTLA
                     KPQDGGFLKPHIFTLTIPQVDGGSNLSVKVRWSQKISYRDGDFTLHIPFTFPEYVTPP
                     GKKLSKKEKIQLNVNIGLGTQVVCRTASHPLKEQKREVGKLAFLYEAEVLTWSTIDFV
                     FTYSVPTSSSFGGIFLQSPSSLGSIDQREMFSLYLFPPGLSKKKKVIKKEVLFVVDIS
                     GSMKGMTIEATKSAVVAALSKLDQGDSFSIMAFNDQTYLYSSTLELVTKQSLEKATNW
                     IAMNFIAGGGTDMSIALNQAIEMLSGAKKSLPIIFFVTDGAVENERQICEVMIKQLEY
                     QGGSNLCPRIYTFGIGSFCNHYFLRMLAMIGRGHYEAASDPESIVAQMEALFSRAAST
                     VLMNISIDGLDDLDALEVYPSVVPDICSEGPLIIFGHYRGGFPDTLKARGILAAEDMS
                     DITIDLKVHRAKDVPLDKVLAKQQIEQYTTQAWFLQDKKLEEKVAKVSMQTGVVSEYT
                     RMILLETVQDKQATSSDIKQGKKETNTQKMEKSSAAMIKVLQPLGVGFGNLIATIENI
                     PPGYEPKLPDQAEMLVRAAGNCCVNLCGKCCCLCCIQVCSKMNDQCAILVTQFCGSLA
                     FLGCFVCCEMCCGSD"
     misc_feature    760..1278
                     /gene="LOC139904383"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cl00057"
                     /db_xref="CDD:469594"
     misc_feature    order(778..780,985..987,1075..1077)
                     /gene="LOC139904383"
                     /note="metal ion-dependent adhesion site (MIDAS); other
                     site"
                     /db_xref="CDD:238738"
ORIGIN      
        1 tgatccccct gccttgattc cccttcagat gaacggaatt gatattcagg ccgactgtta
       61 tctcgacacc gcgttcctta ccatgaacgc ttcttggaga cttcattgtg ttatgtcaag
      121 tgccacctct gaatgtcgtc tcgctattcc tatgccgcct ggtctgcagg tgtagaggtt
      181 caagttacca gaaaatcgta taacacgcag ttagttgtca tggatgaaaa ccctgaaact
      241 tctactacaa ctactactct agccaaacct caagacggag gctttctcaa acctcacata
      301 tttaccttga caataccaca ggttgatggt ggttcaaatc tttcagtcaa agtaagatgg
      361 tctcagaaaa ttagttatag agatggagac ttcacgttac acattccttt cactttccct
      421 gagtatgtta ctcctcccgg aaagaaactc tcaaaaaagg aaaagataca actcaatgtc
      481 aacattggct tgggcacaca ggttgtctgt cgaacagcta gtcatccact caaggagcaa
      541 aagcgggaag taggaaaact ggcctttttg tatgaagcag aagttcttac atggtcaact
      601 attgattttg tgtttacgta ctctgttcct acaagcagtt catttggtgg tatatttttg
      661 cagtctccat catcactagg tagtatagac caaagggaga tgttttcttt gtacctgttt
      721 ccacctggtc tcagcaaaaa gaagaaggtt attaagaagg aagtactttt tgttgtggat
      781 ataagtggaa gcatgaaggg aatgacaatt gaggctacaa aaagcgcggt tgttgcagca
      841 ctgtcaaaac tggatcaagg agattcattt agtataatgg catttaatga ccagacttac
      901 ttgtattcat caaccttgga gttggtaacc aaacaatcgc ttgaaaaagc aaccaattgg
      961 atcgccatga atttcattgc tggtggcggt actgacatgt caatcgctct caatcaggcc
     1021 atagaaatgt tgtctggggc caaaaaatca cttccaatca tcttctttgt gactgacggg
     1081 gctgttgaaa atgagagaca aatttgtgaa gttatgatca aacaactaga atatcaagga
     1141 ggatcaaatc tgtgtccgcg aatatacact tttggtatag gttcgttctg caatcactac
     1201 tttttgcgaa tgcttgcgat gattggcaga ggacattatg aggctgcatc tgatccagag
     1261 tcgattgtag ctcaaatgga agctttgttt tctagagctg cttctacggt tttgatgaac
     1321 atttccattg atggtctgga cgatcttgat gctcttgagg tttatccttc agttgttcca
     1381 gatatatgtt ctgaagggcc actgatcata tttgggcatt acaggggtgg ttttcctgac
     1441 acgctgaaag ctagaggtat cctagcagca gaagatatga gtgacatcac tattgacctg
     1501 aaggtgcacc gagcaaaaga cgtacctctt gacaaggtct tggcaaaaca acaaattgaa
     1561 caatacacaa cgcaagcatg gtttttacaa gataaaaagc ttgaggagaa ggtagcaaaa
     1621 gtcagcatgc agactggtgt tgttagcgag tatacacgta tgatcttgct ggaaacagtt
     1681 caagataagc aagctacgtc atctgacata aaacagggta aaaaagaaac gaatactcag
     1741 aaaatggaaa aatcttctgc tgctatgata aaagtgttgc agccgttggg tgtaggattt
     1801 ggcaacttga ttgcaacaat tgagaacatc cctccgggtt acgaaccaaa attaccagac
     1861 caagcagaaa tgttggttag agcagctggc aactgttgtg taaatctatg tggcaagtgc
     1921 tgttgtctgt gctgcattca agtctgttca aagatgaacg accaatgtgc aattcttgtc
     1981 acacagtttt gtggttcctt ggccttttta ggctgttttg tctgctgtga aatgtgctgt
     2041 ggctcagact gactgactga c
//
LOCUS       XR_011778776             671 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904384), ncRNA.
ACCESSION   XR_011778776
VERSION     XR_011778776.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..671
                     /gene="LOC139904384"
                     /note="uncharacterized LOC139904384; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904384"
     ncRNA           1..671
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904384"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904384"
ORIGIN      
        1 taaaataagt tactcaggct gctgcactca atcgagacaa aaaaaactac tgcacatcta
       61 aatgagctaa ataaaactat gcttcgttta tattttttat cgtcttgcta ttgcatatgc
      121 taatattagt atcagtggct gatgttcttc gctcttcagc agacaaattt gtgcaggcgt
      181 tgactttcct gcttgccttc aatcttgcct tcaatctaaa tcttcaagat tatcgtcttt
      241 ctcggtattt ttctcgcacg ctcaattgtt cattcaatta gtcatcttca aaggcagttg
      301 ccgattacat cttgctaagg ttagaaaatg caaaccgaag ctgttattca ctctttttta
      361 catgaagatg atgaatacta atgggatttt attgtcatgt taagttgtcg tctcacagaa
      421 ttctggatga atttatttgc ttgcaagatg ggacttcaga ctattattca agcaatatca
      481 tttttgtctt cggttgacca aaagaattta gctaccagaa attctatgat cttcccggtt
      541 taaaagtaaa aactaactga attcattatg ttctttaggt tgattttcgg attctatttc
      601 attattcatc ataatgagca atgagtaatt tattgaaata aagatgccta acttaagtta
      661 attgtatgtt a
//
LOCUS       XM_071886322            4066 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            At4g27190-like (LOC139904385), mRNA.
ACCESSION   XM_071886322
VERSION     XM_071886322.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4066
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4066
                     /gene="LOC139904385"
                     /note="disease resistance protein At4g27190-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904385"
     CDS             1..3912
                     /gene="LOC139904385"
                     /codon_start=1
                     /product="disease resistance protein At4g27190-like"
                     /protein_id="XP_071742423.1"
                     /db_xref="GeneID:139904385"
                     /translation="MEVLIGCAGNFIALIGEKLIAETSRHLGYVLNYKKNLKSLKEQV
                     EKLKAKSYGIMLEVEDARRNGEIVAPEVDQWFASVDIVCEESTKFLEIEVQENKTSWF
                     PNIKRRYMLSKMAKKKTEKAAELKGETFPKISYPAPPSEVGEISNENFRNFESRTPTV
                     NQLMKWLKDDTKRIISICGMGGSGKTTLVKEVARRVKGEKLFDEIVMAVVPKEHDLER
                     VQEDLAKWLGLRFKSTTLEGRANELWKRLLQSKKGNLVILDDVWTHVELKSIGIPFGN
                     KYNCKVILTSRSVDACKAMGCNEILRLDVLTQSEAWSLLGEMVGDSLQNDPDLCETAS
                     EIAKKCGGLPIAIVCLGRALKDKRKEVWNDTLQKLQKGIVPENIEGVKKDVYKSLQVS
                     YDLLEDEETKKIFILCCLYPEYANVSLEALVRNGFGLDLFRGVDSLMQARDRVHALTD
                     QLKSRFLLLSGDRKSTVKVHNVVRAVGISVASTSKLNMEQQFSAVVIHEDKWSRRGTY
                     VDYNALSLVSNEISEVPSRGLNFEKVELFQLSCPKLVPLEKLNPVFEVMKKLRVVEMW
                     NMSVFSLSSLLVSLPRDVFALCMDCNMETIGDIKSEEFVDLEILSLGNCDIQELPLQV
                     GKFVSLRLLDLSRCHSLHRIAPGVISSLSRLEELDTGSKSWGNDENDASLTELESLKN
                     LIYLGIRIKSSSFLPKNSIFQKLQRYVISVGVHFEKVPSFNNRMLLLQLESTDTHLGG
                     GIETLLRRNTEKVFLTGDGLKTALKELVPNGFQQVRNLTVECCNSEGTEYLSDYSYSS
                     NSSGVFNNLEKLHIEKMWHLKGILRHDVQGLPVRSFSRLRKIRLSVVPEMRHLFTQSV
                     AMNLVQLESLYIEYCPNMHQVIQNPRSSAPEITVDDKIVFPKLTELIINDVGLSCFCQ
                     GINLQLEFPQLKVLKLEYLQKFYTFCPEEISFSNHRGVKLQSLVDHKVEFSSLAELTI
                     TNVANIKEVWCGHHPNLVHLQGLYIQFCHMMEQVILIQRPSITTAEEKIVFLMLKEVI
                     LFGLNKLTFFCRGVDYVEFPQLRVLRLRWLTHFRTFCSDETATRPGPVFDDKVSFPIL
                     ETLEVSELESVEELWSNQLAPSQFGKLKSLRIEKCHKLVKIFPSDLDTLFPNLEKLQV
                     EKCDSLEQVWGSKGVQIRNLKSLYIYECPKLRNLCSFYTFKGLSNLQILDVSSCKMME
                     AVILDDHSDGNLGAVLSVDKLEKLKLAYLPNLNYFSNTKWDIELIELKQVTVKSCPDM
                     YTFSKSSVITQRLKYAVIDGVETWLGDLNSTIKHRFSNWEY"
     misc_feature    31..>870
                     /gene="LOC139904385"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; Region: NACHT; COG5635"
                     /db_xref="CDD:444362"
     misc_feature    466..1182
                     /gene="LOC139904385"
                     /note="NB-ARC domain; Region: NB-ARC; pfam00931"
                     /db_xref="CDD:395745"
     misc_feature    <1804..>2067
                     /gene="LOC139904385"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     Region: LRR; COG4886"
                     /db_xref="CDD:443914"
     misc_feature    1819..1887
                     /gene="LOC139904385"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275378"
     misc_feature    1888..1962
                     /gene="LOC139904385"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275378"
     misc_feature    3343..3420
                     /gene="LOC139904385"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    3421..3495
                     /gene="LOC139904385"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 atggaagtgt tgataggttg tgccggtaat ttcatagctt taatcggaga aaaacttatt
       61 gccgaaacta gccgccacct gggatacgta ttaaactaca agaaaaacct taaaagtctc
      121 aaagaacaag tagagaaact aaaggccaaa tcatatggaa taatgctaga agttgaagat
      181 gcaagaagaa atggagaaat tgttgcacct gaagttgacc aatggtttgc aagtgtagat
      241 atagtttgtg aagaatctac caaatttctt gaaatcgaag ttcaagaaaa caaaactagc
      301 tggtttccaa atatcaaacg acggtacatg ttaagcaaaa tggcgaagaa aaaaacagag
      361 aaggctgctg agttaaaagg cgaaacgttt cctaaaatat cataccctgc acctccatca
      421 gaagtaggag aaatatcgaa tgagaatttc agaaactttg aatcaagaac accaactgta
      481 aatcagttga tgaagtggtt aaaggatgac acgaaacgta ttattagtat atgtggtatg
      541 ggtggatcag gtaagactac gttggttaag gaagttgcga ggcgtgttaa aggcgagaaa
      601 ttgttcgatg agattgtcat ggcggtcgta ccgaaagaac atgatttgga acgtgttcaa
      661 gaagatttgg caaaatggtt agggttaaga ttcaaatcta caacgttaga aggacgagcg
      721 aatgaattat ggaaacggtt acttcaaagc aaaaagggga atcttgtgat acttgacgac
      781 gtgtggacac atgtcgagtt gaaaagtatc gggataccgt ttggtaacaa gtataattgt
      841 aaagtgattt tgacttcaag aagcgttgat gcgtgtaaag cgatgggatg taatgaaatt
      901 ttacgacttg atgtgttaac acaatcggaa gcttggagtc ttttgggcga aatggttggc
      961 gattcgctac aaaatgatcc cgatttgtgt gaaacagcat ctgaaattgc gaaaaagtgt
     1021 ggtggtttac ctattgcaat agtgtgtctt ggtagggcac taaaggacaa aagaaaagaa
     1081 gtttggaacg atacgttgca aaaactgcaa aagggtattg tacccgaaaa cattgaaggt
     1141 gttaagaaag acgtctataa gtctttgcaa gtaagttatg atcttttaga agatgaagaa
     1201 acgaaaaaaa tctttatttt atgttgtttg tatccggaat atgcaaatgt ttcattagaa
     1261 gcgttggtgc gaaatgggtt tgggttggat ttgttcaggg gtgtggattc attgatgcaa
     1321 gcaagagaca gagtacatgc gcttaccgat caacttaaaa gccgttttct gttattaagt
     1381 ggtgatagaa agtcaactgt caaagtgcac aatgttgtac gtgcagttgg aatatcagtt
     1441 gcatctacgt cgaaattgaa tatggagcaa caattcagtg cagtagttat acacgaggat
     1501 aaatggtcta gacgtgggac ctacgttgat tacaatgcgc tctcgttagt atcaaatgag
     1561 atatctgagg ttccttcgag agggttaaat ttcgaaaaag ttgaactttt tcaactgtca
     1621 tgtccaaagt tagtaccttt agagaagttg aacccggttt ttgaggtaat gaagaaacta
     1681 cgagtcgttg aaatgtggaa tatgtcagtt ttttcactat cgtcgttact agtttctttg
     1741 cctcgagatg tgtttgcgct atgtatggac tgcaatatgg aaactattgg agacattaaa
     1801 agtgaagagt ttgttgatct tgaaatattg agtttgggaa attgtgatat tcaagagttg
     1861 cctctgcaag ttgggaaatt tgttagtttg aggttgctag atttgagtcg ttgtcattcg
     1921 ctgcatagga tcgcgccagg tgtcatttca agtttgtcgc gattagaaga attagacacg
     1981 ggatcaaagt cgtggggtaa cgacgaaaat gatgcaagct taaccgaact agagtcttta
     2041 aaaaacttga tatatttagg gatacgaatc aaatcttcga gtttcctccc taaaaattcg
     2101 atctttcaaa aactacaacg atacgttatt tctgtaggag ttcattttga aaaggttcca
     2161 tctttcaaca accgaatgct tttgttacag ctcgagagta ccgatacgca tttaggaggc
     2221 gggatcgaaa cgttattaag aagaaacact gaaaaagtgt ttttaaccgg tgacggtttg
     2281 aaaacggcgc taaaagagct cgtcccgaat ggttttcagc aagtgagaaa cttaactgtt
     2341 gaatgttgta acagtgaagg tacagaatat ctttcagatt acagttactc gtcgaatagt
     2401 tctggcgtgt ttaataattt ggagaaacta catatcgaaa agatgtggca tttaaaagga
     2461 atattacgtc atgatgttca agggcttccg gttagatcat tttcaaggtt acgtaagatt
     2521 cgtctgtcag ttgtacctga aatgagacac ctgtttacgc agtcagtagc aatgaatttg
     2581 gtgcaactcg aaagccttta tatagaatat tgcccaaata tgcaccaagt tatacaaaat
     2641 ccaaggtctt cagcgccgga aattactgtt gatgataaga ttgttttccc aaagttgacg
     2701 gagttgatca ttaacgatgt tggattaagt tgtttctgtc aggggattaa cctgcaactt
     2761 gagtttcctc agctcaaagt attgaaactt gaatatttac agaaatttta taccttttgt
     2821 cctgaggaga tcagtttttc taaccatcga ggcgttaagc ttcaatctct cgtcgaccac
     2881 aaggttgaat tttctagctt ggcagaattg acaattacta atgttgccaa tattaaggaa
     2941 gtttggtgtg ggcaccatcc aaatctagtg catctgcaag gactttatat tcaattttgt
     3001 cacatgatgg aacaagttat tttaatccaa agaccttcta ttactacagc agaagaaaag
     3061 attgtgttcc tcatgctaaa agaagtaatc ctttttggac taaataagct aacttttttc
     3121 tgccgagggg ttgattacgt cgagtttccc caactcagag ttctgcgact tcgttggcta
     3181 acacatttca gaactttctg tagtgacgag actgccactc gcccgggacc tgtatttgat
     3241 gataaggtct catttcctat tttggagaca cttgaagtgt ctgaactaga aagcgtcgag
     3301 gagttgtggt ccaaccaact ggcaccaagc caattcggta agctaaaatc gctaagaatc
     3361 gaaaaatgtc acaaactagt gaaaatattt ccatcggatt tggatacact gtttccaaat
     3421 ttggaaaagt tgcaagtaga aaaatgtgat tcactggaac aagtgtgggg atcgaaagga
     3481 gtacaaatca gaaacctgaa aagtttatat atttacgagt gtccgaagtt gagaaacttg
     3541 tgctctttct acacattcaa aggtctttca aatctccaga ttttggatgt gtcaagttgc
     3601 aagatgatgg aagcagttat tttagatgat catagtgatg gaaacttggg tgccgttctt
     3661 tcggttgaca aactggaaaa actcaagctt gcgtatctac caaatcttaa ctatttttcg
     3721 aataccaaat gggatataga actgattgaa ctaaaacaag tgactgttaa gagttgtcca
     3781 gatatgtata ctttctctaa aagttcagtc atcacacaaa gactcaagta tgcagtgatt
     3841 gatggtgtag aaacttggtt gggagacctc aatagtacaa tcaagcacag attttctaat
     3901 tgggaatatt agatcatcca tttgattttg ccggcagctt tctgcggtgc atactcggtt
     3961 atatgaagca caaatttgaa caaatattcg ctcataagga gcacttggaa acttcaaaga
     4021 tagttgatgg tctgtaataa cttataacat cgtgttgttg tgtgtg
//
LOCUS       XM_071886323            4512 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter C family
            member 8-like (LOC139904386), transcript variant X1, mRNA.
ACCESSION   XM_071886323
VERSION     XM_071886323.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4512
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4512
                     /gene="LOC139904386"
                     /note="ABC transporter C family member 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139904386"
     CDS             20..4381
                     /gene="LOC139904386"
                     /codon_start=1
                     /product="ABC transporter C family member 8-like isoform
                     X1"
                     /protein_id="XP_071742424.1"
                     /db_xref="GeneID:139904386"
                     /translation="MFHEFHFDMKNSVAAQTSILDIFNLIFLVFFYLLLLVNYLRKSN
                     TNRSTVNSNWISQSVASCCVLTSVAYLIAGLWNTTPQLHWWVFAGKSLVWLTLTVSLL
                     VQEFTSSLKFINSVWWIFVFLSVSVVNIKSLAELNEITVLSSIEWASSIFLLLCALRN
                     FKHFITRYSQSQTLSEPLIGNHNHNHNEVHETETRKLEEPSFLSTLTFSWVNPILVLG
                     YRKPLVLEEIPHLAPIDQASVAHEKFKKAWDSLQTEKASNNVNMVPKALAKVYLREMI
                     LSGVCIFLRTISVIVSPLLLYAFVDYSNREIKDLHQGLLLVGCLILVKITESLSQRQF
                     FFNARRTGMRMRSALMVAVYEKQLKLSNLGKKRHSTGEVVNYIAVDAYRMGEFPMWFH
                     VSWSAVVQLFLAMGVLFSVVGLGVVPGLVPLIVCALLNIPFAKSMQKCQLQIMVAQDK
                     RLRSTSEVLNNMKVIKLHCWEEKFHNLIKSLREIEFRWLRESQFKRAFTAVLYWMSPT
                     LVSSVVFCGCVVLKSAPLNAATIFTILAALRSMAEPVRVLPDALSALIQVKVSFDRIN
                     SLLVDDELKDNRMKSNQDLENAMTRIRIQDGNFAWDPESPTPTLKNINLEVKCGQKVA
                     VCGSVGTGKSSILYALLGELSKTSGSVSVGIFRSIAYVSQTSWIQSGTIQDNILYGKP
                     MERSKYEKAIKACALDKDIEAFEHGDLTEIGQRGLNMSGGQKQRIQLARAVYNDADIY
                     LLDDPFSAVDAHTAATLFNDCVMSCLEKKTVILVTHQVEFLSSVDNILVMQDGQVTQS
                     GKYDDLLMAGTAFEQLVNAHKDAIIGVEPSGNTHQNDVDTDTNFIAKANSEIQLMKGL
                     PEGVQLTEEEEKEVGNVGWKPFFDYVVISEGLFYLLSCVISQTSFVALQAAASYWLAF
                     GIQIPKITTFMLIGVYTFLSTISTFFVFMRSFFGTLLGLKASKSVFDKFTDSIFRAPM
                     VFFDSTPVGRILTRASSDLSVVDFDIPVGFIYVVGSGLELLAIIFVMASVTWQVLIVA
                     VLGLAATKYVQGYYQPTARELMRINGTTKAPVMNYASETSLGVATIRAFKMQDRFFKD
                     YLKLVDTDASTFMFSNATLEWLVLRIETLANVTLFIASFLLVLLPKGFVPSGLVGLSL
                     SYALTLSGTQVFFTRWYCSLDNYVISVERIKQFMHISPEPPAIVDNNRPPSSWPSKGT
                     IQFQNLKLRYRPNAPLVLKGISCTFKEGTRVGIVGRTGSGKTTLITALFRLVEPESGK
                     ILIDGLDICSIGLKDLRLKLSVIPQEPTLFKGSIRTNLDPLGLHSDDEIWKALDKCQL
                     KSTITSLPNLLDSSVSDEGENWSAGQRQLFCLGRVLLMRNKILVLDEATASIDSATDA
                     VLQRIIREEFSNCTVITVAHRVPTVIDSDRVMVLSFGKMVEYDEPSKLMETNTFFSKL
                     VAEYWSSCKKNSAQRFE"
     misc_feature    620..4348
                     /gene="LOC139904386"
                     /note="ABC transporter C family member; Provisional;
                     Region: PLN03130"
                     /db_xref="CDD:215595"
ORIGIN      
        1 tactgcaggg ttgatcgcca tgtttcatga gtttcatttt gatatgaaga attcagtagc
       61 cgcacaaaca agtattttag acatcttcaa cttaatattt cttgttttct tctacttgct
      121 gctactagta aattatcttc gaaaaagtaa taccaacaga tccacggtaa atagtaattg
      181 gatatcacag tcagttgcat cttgttgcgt tcttacttcg gttgcatatc tgattgctgg
      241 tttatggaac acaacgcctc aattgcattg gtgggttttc gctggtaaat cgttagtttg
      301 gttaactctt acggtttctt tgctagtaca agaatttact tcttcgctga aatttataaa
      361 ttctgtgtgg tggatttttg tcttcttgtc ggtttctgtt gtgaacatca agagtttagc
      421 agaattaaac gagataacgg tcttgagttc gatagaatgg gcttctagca tcttcctttt
      481 gttatgcgct ttaagaaact tcaaacattt catcactcgc tactcacaaa gccagacgtt
      541 atcagagcct ttaattggta atcataatca taatcacaat gaagtacatg aaacggaaac
      601 acgcaaacta gaagaaccta gttttcttag tacactaacg ttttcgtggg tgaacccgat
      661 actcgtatta ggttatagaa aaccattagt tctagaagaa atcccgcatc tagcacccat
      721 agatcaagca tccgttgcac acgagaaatt caaaaaggca tgggattcac ttcaaaccga
      781 aaaggcctcg aacaacgtta acatggtacc taaagcgtta gccaaagttt atttgcgaga
      841 gatgatatta tcgggcgtat gtatctttct aaggactata tcggtcatcg ttagtccgtt
      901 gttactctat gcatttgttg actactccaa cagagagatt aaagatttac atcaaggact
      961 cttattagta ggatgtttaa ttttagtcaa gataacagag tcactgtcac aacgacaatt
     1021 tttctttaat gcacgaagaa ccggtatgag gatgaggtca gctttaatgg tggctgttta
     1081 tgagaaacaa cttaagcttt ctaatttagg aaagaaaagg cattcaacag gggaagttgt
     1141 gaattacata gctgttgatg cttacagaat gggtgagttc cctatgtggt ttcatgtcag
     1201 ttggtcagct gttgttcagt tatttctagc tatgggtgtt ttgttttcgg ttgtaggact
     1261 aggtgttgtt cctggtttag tccctttgat cgtatgtgcg cttcttaata taccgtttgc
     1321 aaaatctatg caaaagtgtc agttacagat catggttgct caagacaaga gactaagatc
     1381 gacatccgag gtccttaaca atatgaaagt cataaagtta cattgttggg aagagaagtt
     1441 tcataatttg atcaaatcgc ttagagaaat cgagtttcgt tggcttcgtg aatctcagtt
     1501 taagagggcg tttactgcag ttttgtattg gatgtcacca acgctcgttt cttcagtcgt
     1561 tttttgtgga tgtgttgttt tgaaaagtgc acctttgaat gctgctacta tatttactat
     1621 attagctgca ttacgaagta tggcggagcc cgttagagtg ttgccggatg ctctttctgc
     1681 gttgattcaa gtcaaagtat cctttgaccg aattaattct ttgttggttg acgatgaact
     1741 aaaagacaac aggatgaaaa gtaaccaaga ccttgaaaat gcaatgaccc gtatcagaat
     1801 acaggatggt aatttcgcct gggatcctga gtcgcccact ccaacactaa aaaatataaa
     1861 tcttgaagta aaatgtgggc agaaagtagc cgtttgtggg tctgttggta ctggaaaatc
     1921 gtcaatttta tacgcactcc ttggagaact atctaaaact tctggaagtg tgagtgtggg
     1981 tatttttcga tcaattgctt acgttagcca aacgtcgtgg attcaaagtg gaacaattca
     2041 agataacata ctgtatggga aacctatgga gagaagtaaa tatgaaaagg cgataaaggc
     2101 atgtgctttg gataaggata ttgaagcgtt tgaacatgga gatttaacag aaataggcca
     2161 aagaggactt aacatgagtg gtggacagaa acagaggatt cagcttgctc gagcagtcta
     2221 taatgatgct gacatctatc ttcttgatga cccgtttagc gctgtagatg cacataccgc
     2281 agcaactctc tttaatgatt gtgtcatgag ctgtttagag aagaaaacag tcattcttgt
     2341 gactcatcaa gtggagtttc tctcatcagt cgacaatatt ctggttatgc aagatggtca
     2401 agttacacaa tcaggaaagt atgatgatct gttgatggca gggacagcat ttgagcaact
     2461 tgtgaatgct cataaagatg ctattatagg tgtggaacct tctggaaata cgcatcaaaa
     2521 cgatgtggat accgatacaa atttcatagc taaagcaaac agtgaaatac aattaatgaa
     2581 gggtctacca gaaggagttc agttgaccga agaagaagaa aaagaggtcg gaaatgttgg
     2641 atggaagcct ttctttgatt acgttgttat ctcggaagga ttgttttact tgttgtcttg
     2701 tgtcataagt caaaccagtt ttgtcgctct tcaagcagca gcaagttatt ggctagcatt
     2761 cggtattcaa attcccaaaa ttaccacctt catgttgatt ggtgtttata cctttctgtc
     2821 aacaataagc acattttttg tgtttatgag atcatttttt ggtacacttt tgggattgaa
     2881 agcctcgaaa tcagtcttcg ataagttcac cgattcaata ttccgtgctc ccatggtctt
     2941 ttttgactct actccagttg gcagaattct gaccagggcc tcgtccgatc ttagtgttgt
     3001 tgattttgac atacccgttg ggttcatcta tgtggttggt tcaggtcttg aactacttgc
     3061 cataattttt gttatggctt cagtcacatg gcaagttctc attgtagccg tcctaggatt
     3121 agcggctaca aaatatgttc agggatatta tcaaccaaca gcacgggagc taatgagaat
     3181 caacggaacc acaaaagcac ctgtcatgaa ttatgcatcc gaaacatcac ttggagtcgc
     3241 aacaattcgg gcattcaaaa tgcaagacag attcttcaaa gactacctta aactggtgga
     3301 cacagatgca agcactttca tgttttcaaa tgcaacgttg gaatggttgg ttttgagaat
     3361 agaaacatta gcaaatgtga cattgttcat cgctagtttt ctcctagttt tgttaccaaa
     3421 gggttttgtg ccatcagggt tggtggggct ctctctttct tatgcgttaa ccctatcggg
     3481 tacccaagtg ttctttacta gatggtattg tagcttggac aattacgtca tttcggtaga
     3541 acgaatcaag caattcatgc acatttcacc agagccacct gcgatcgtgg acaacaatag
     3601 accaccttca tcttggcctt caaagggtac aatccagttc caaaatctaa agttaagata
     3661 tcgtccaaat gcaccgctag ttcttaaagg tatcagttgt acattcaaag aagggactcg
     3721 agttggtatc gtgggaagaa ctggaagtgg aaagacgaca ctgataacgg ccctgtttcg
     3781 attagtagaa cctgagagcg gaaaaattct tatagatgga ttggacattt gctctatcgg
     3841 ccttaaagat ctcagattga aactaagtgt tatcccccaa gaaccaaccc tttttaaagg
     3901 aagcattcga acaaatttgg accctcttgg actacattct gatgatgaga tatggaaggc
     3961 attagataag tgtcagctta aaagtaccat tacaagtctt ccaaatttgc tagattcttc
     4021 agtgagtgat gaaggagaga actggagtgc gggacaaaga caattatttt gtcttggacg
     4081 tgtattactt atgagaaaca aaatcctggt acttgatgaa gcaactgcat cgatcgattc
     4141 tgctacagat gccgttttac agagaatcat aagggaagaa ttctcaaatt gcactgttat
     4201 aaccgtcgcc cacagagttc ctacagttat tgacagtgac agggtcatgg ttctctcttt
     4261 cgggaaaatg gtggagtatg atgaaccttc aaagctaatg gagaccaata ccttcttttc
     4321 taaacttgta gctgaatact ggtccagttg caaaaagaac tctgctcaga gatttgaata
     4381 atttcggtga tagcaaaata actactgtcc ggacatgtat acaaacagaa tgttcaattc
     4441 actgactcga tactctagtg caccttatat aaaatactca gagtaactac ttaaaaatct
     4501 acaagatgta ta
//
LOCUS       XM_071886324            4506 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter C family
            member 8-like (LOC139904386), transcript variant X2, mRNA.
ACCESSION   XM_071886324
VERSION     XM_071886324.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4506
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4506
                     /gene="LOC139904386"
                     /note="ABC transporter C family member 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139904386"
     CDS             20..4375
                     /gene="LOC139904386"
                     /codon_start=1
                     /product="ABC transporter C family member 8-like isoform
                     X2"
                     /protein_id="XP_071742425.1"
                     /db_xref="GeneID:139904386"
                     /translation="MFHEFHFDMKNSVAAQTSILDIFNLIFLVFFYLLLLVNYLRKSN
                     TNRSTVNSNWISQSVASCCVLTSVAYLIAGLWNTTPQLHWWVFAGKSLVWLTLTVSLL
                     VQEFTSSLKFINSVWWIFVFLSVSVVNIKSLAELNEITVLSSIEWASSIFLLLCALRN
                     FKHFITRYSQSQTLSEPLIGNHNHNHNEVHETETRKLEEPSFLSTLTFSWVNPILVLG
                     YRKPLVLEEIPHLAPIDQASVAHEKFKKAWDSLQTEKASNNVNMVPKALAKVYLREMI
                     LSGVCIFLRTISVIVSPLLLYAFVDYSNREIKDLHQGLLLVGCLILVKITESLSQRQF
                     FFNARRTGMRMRSALMVAVYEKQLKLSNLGKKRHSTGEVVNYIAVDAYRMGEFPMWFH
                     VSWSAVVQLFLAMGVLFSVVGLGVVPGLVPLIVCALLNIPFAKSMQKCQLQIMVAQDK
                     RLRSTSEVLNNMKVIKLHCWEEKFHNLIKSLREIEFRWLRESQFKRAFTAVLYWMSPT
                     LVSSVVFCGCVVLKSAPLNAATIFTILAALRSMAEPVRVLPDALSALIQVKVSFDRIN
                     SLLVDDELKDNRMKSNQDLENAMTRIRIQDGNFAWDPESPTPTLKNINLEVKCGQKVA
                     VCGSVGTGKSSILYALLGELSKTSGSVGIFRSIAYVSQTSWIQSGTIQDNILYGKPME
                     RSKYEKAIKACALDKDIEAFEHGDLTEIGQRGLNMSGGQKQRIQLARAVYNDADIYLL
                     DDPFSAVDAHTAATLFNDCVMSCLEKKTVILVTHQVEFLSSVDNILVMQDGQVTQSGK
                     YDDLLMAGTAFEQLVNAHKDAIIGVEPSGNTHQNDVDTDTNFIAKANSEIQLMKGLPE
                     GVQLTEEEEKEVGNVGWKPFFDYVVISEGLFYLLSCVISQTSFVALQAAASYWLAFGI
                     QIPKITTFMLIGVYTFLSTISTFFVFMRSFFGTLLGLKASKSVFDKFTDSIFRAPMVF
                     FDSTPVGRILTRASSDLSVVDFDIPVGFIYVVGSGLELLAIIFVMASVTWQVLIVAVL
                     GLAATKYVQGYYQPTARELMRINGTTKAPVMNYASETSLGVATIRAFKMQDRFFKDYL
                     KLVDTDASTFMFSNATLEWLVLRIETLANVTLFIASFLLVLLPKGFVPSGLVGLSLSY
                     ALTLSGTQVFFTRWYCSLDNYVISVERIKQFMHISPEPPAIVDNNRPPSSWPSKGTIQ
                     FQNLKLRYRPNAPLVLKGISCTFKEGTRVGIVGRTGSGKTTLITALFRLVEPESGKIL
                     IDGLDICSIGLKDLRLKLSVIPQEPTLFKGSIRTNLDPLGLHSDDEIWKALDKCQLKS
                     TITSLPNLLDSSVSDEGENWSAGQRQLFCLGRVLLMRNKILVLDEATASIDSATDAVL
                     QRIIREEFSNCTVITVAHRVPTVIDSDRVMVLSFGKMVEYDEPSKLMETNTFFSKLVA
                     EYWSSCKKNSAQRFE"
     misc_feature    620..4342
                     /gene="LOC139904386"
                     /note="ABC transporter C family member; Provisional;
                     Region: PLN03130"
                     /db_xref="CDD:215595"
ORIGIN      
        1 tactgcaggg ttgatcgcca tgtttcatga gtttcatttt gatatgaaga attcagtagc
       61 cgcacaaaca agtattttag acatcttcaa cttaatattt cttgttttct tctacttgct
      121 gctactagta aattatcttc gaaaaagtaa taccaacaga tccacggtaa atagtaattg
      181 gatatcacag tcagttgcat cttgttgcgt tcttacttcg gttgcatatc tgattgctgg
      241 tttatggaac acaacgcctc aattgcattg gtgggttttc gctggtaaat cgttagtttg
      301 gttaactctt acggtttctt tgctagtaca agaatttact tcttcgctga aatttataaa
      361 ttctgtgtgg tggatttttg tcttcttgtc ggtttctgtt gtgaacatca agagtttagc
      421 agaattaaac gagataacgg tcttgagttc gatagaatgg gcttctagca tcttcctttt
      481 gttatgcgct ttaagaaact tcaaacattt catcactcgc tactcacaaa gccagacgtt
      541 atcagagcct ttaattggta atcataatca taatcacaat gaagtacatg aaacggaaac
      601 acgcaaacta gaagaaccta gttttcttag tacactaacg ttttcgtggg tgaacccgat
      661 actcgtatta ggttatagaa aaccattagt tctagaagaa atcccgcatc tagcacccat
      721 agatcaagca tccgttgcac acgagaaatt caaaaaggca tgggattcac ttcaaaccga
      781 aaaggcctcg aacaacgtta acatggtacc taaagcgtta gccaaagttt atttgcgaga
      841 gatgatatta tcgggcgtat gtatctttct aaggactata tcggtcatcg ttagtccgtt
      901 gttactctat gcatttgttg actactccaa cagagagatt aaagatttac atcaaggact
      961 cttattagta ggatgtttaa ttttagtcaa gataacagag tcactgtcac aacgacaatt
     1021 tttctttaat gcacgaagaa ccggtatgag gatgaggtca gctttaatgg tggctgttta
     1081 tgagaaacaa cttaagcttt ctaatttagg aaagaaaagg cattcaacag gggaagttgt
     1141 gaattacata gctgttgatg cttacagaat gggtgagttc cctatgtggt ttcatgtcag
     1201 ttggtcagct gttgttcagt tatttctagc tatgggtgtt ttgttttcgg ttgtaggact
     1261 aggtgttgtt cctggtttag tccctttgat cgtatgtgcg cttcttaata taccgtttgc
     1321 aaaatctatg caaaagtgtc agttacagat catggttgct caagacaaga gactaagatc
     1381 gacatccgag gtccttaaca atatgaaagt cataaagtta cattgttggg aagagaagtt
     1441 tcataatttg atcaaatcgc ttagagaaat cgagtttcgt tggcttcgtg aatctcagtt
     1501 taagagggcg tttactgcag ttttgtattg gatgtcacca acgctcgttt cttcagtcgt
     1561 tttttgtgga tgtgttgttt tgaaaagtgc acctttgaat gctgctacta tatttactat
     1621 attagctgca ttacgaagta tggcggagcc cgttagagtg ttgccggatg ctctttctgc
     1681 gttgattcaa gtcaaagtat cctttgaccg aattaattct ttgttggttg acgatgaact
     1741 aaaagacaac aggatgaaaa gtaaccaaga ccttgaaaat gcaatgaccc gtatcagaat
     1801 acaggatggt aatttcgcct gggatcctga gtcgcccact ccaacactaa aaaatataaa
     1861 tcttgaagta aaatgtgggc agaaagtagc cgtttgtggg tctgttggta ctggaaaatc
     1921 gtcaatttta tacgcactcc ttggagaact atctaaaact tctggaagtg tgggtatttt
     1981 tcgatcaatt gcttacgtta gccaaacgtc gtggattcaa agtggaacaa ttcaagataa
     2041 catactgtat gggaaaccta tggagagaag taaatatgaa aaggcgataa aggcatgtgc
     2101 tttggataag gatattgaag cgtttgaaca tggagattta acagaaatag gccaaagagg
     2161 acttaacatg agtggtggac agaaacagag gattcagctt gctcgagcag tctataatga
     2221 tgctgacatc tatcttcttg atgacccgtt tagcgctgta gatgcacata ccgcagcaac
     2281 tctctttaat gattgtgtca tgagctgttt agagaagaaa acagtcattc ttgtgactca
     2341 tcaagtggag tttctctcat cagtcgacaa tattctggtt atgcaagatg gtcaagttac
     2401 acaatcagga aagtatgatg atctgttgat ggcagggaca gcatttgagc aacttgtgaa
     2461 tgctcataaa gatgctatta taggtgtgga accttctgga aatacgcatc aaaacgatgt
     2521 ggataccgat acaaatttca tagctaaagc aaacagtgaa atacaattaa tgaagggtct
     2581 accagaagga gttcagttga ccgaagaaga agaaaaagag gtcggaaatg ttggatggaa
     2641 gcctttcttt gattacgttg ttatctcgga aggattgttt tacttgttgt cttgtgtcat
     2701 aagtcaaacc agttttgtcg ctcttcaagc agcagcaagt tattggctag cattcggtat
     2761 tcaaattccc aaaattacca ccttcatgtt gattggtgtt tatacctttc tgtcaacaat
     2821 aagcacattt tttgtgttta tgagatcatt ttttggtaca cttttgggat tgaaagcctc
     2881 gaaatcagtc ttcgataagt tcaccgattc aatattccgt gctcccatgg tcttttttga
     2941 ctctactcca gttggcagaa ttctgaccag ggcctcgtcc gatcttagtg ttgttgattt
     3001 tgacataccc gttgggttca tctatgtggt tggttcaggt cttgaactac ttgccataat
     3061 ttttgttatg gcttcagtca catggcaagt tctcattgta gccgtcctag gattagcggc
     3121 tacaaaatat gttcagggat attatcaacc aacagcacgg gagctaatga gaatcaacgg
     3181 aaccacaaaa gcacctgtca tgaattatgc atccgaaaca tcacttggag tcgcaacaat
     3241 tcgggcattc aaaatgcaag acagattctt caaagactac cttaaactgg tggacacaga
     3301 tgcaagcact ttcatgtttt caaatgcaac gttggaatgg ttggttttga gaatagaaac
     3361 attagcaaat gtgacattgt tcatcgctag ttttctccta gttttgttac caaagggttt
     3421 tgtgccatca gggttggtgg ggctctctct ttcttatgcg ttaaccctat cgggtaccca
     3481 agtgttcttt actagatggt attgtagctt ggacaattac gtcatttcgg tagaacgaat
     3541 caagcaattc atgcacattt caccagagcc acctgcgatc gtggacaaca atagaccacc
     3601 ttcatcttgg ccttcaaagg gtacaatcca gttccaaaat ctaaagttaa gatatcgtcc
     3661 aaatgcaccg ctagttctta aaggtatcag ttgtacattc aaagaaggga ctcgagttgg
     3721 tatcgtggga agaactggaa gtggaaagac gacactgata acggccctgt ttcgattagt
     3781 agaacctgag agcggaaaaa ttcttataga tggattggac atttgctcta tcggccttaa
     3841 agatctcaga ttgaaactaa gtgttatccc ccaagaacca acccttttta aaggaagcat
     3901 tcgaacaaat ttggaccctc ttggactaca ttctgatgat gagatatgga aggcattaga
     3961 taagtgtcag cttaaaagta ccattacaag tcttccaaat ttgctagatt cttcagtgag
     4021 tgatgaagga gagaactgga gtgcgggaca aagacaatta ttttgtcttg gacgtgtatt
     4081 acttatgaga aacaaaatcc tggtacttga tgaagcaact gcatcgatcg attctgctac
     4141 agatgccgtt ttacagagaa tcataaggga agaattctca aattgcactg ttataaccgt
     4201 cgcccacaga gttcctacag ttattgacag tgacagggtc atggttctct ctttcgggaa
     4261 aatggtggag tatgatgaac cttcaaagct aatggagacc aataccttct tttctaaact
     4321 tgtagctgaa tactggtcca gttgcaaaaa gaactctgct cagagatttg aataatttcg
     4381 gtgatagcaa aataactact gtccggacat gtatacaaac agaatgttca attcactgac
     4441 tcgatactct agtgcacctt atataaaata ctcagagtaa ctacttaaaa atctacaaga
     4501 tgtata
//
LOCUS       XM_071886325            3797 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter C family
            member 8-like (LOC139904386), transcript variant X3, mRNA.
ACCESSION   XM_071886325
VERSION     XM_071886325.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3797
                     /gene="LOC139904386"
                     /note="ABC transporter C family member 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904386"
     CDS             20..3661
                     /gene="LOC139904386"
                     /codon_start=1
                     /product="ABC transporter C family member 8-like isoform
                     X3"
                     /protein_id="XP_071742426.1"
                     /db_xref="GeneID:139904386"
                     /translation="MFHEFHFDMKNSVAAQTSILDIFNLIFLVFFYLLLLVNYLRKSN
                     TNRSTVNSNWISQSVASCCVLTSVAYLIAGLWNTTPQLHWWVFAGKSLVWLTLTVSLL
                     VQEFTSSLKFINSVWWIFVFLSVSVVNIKSLAELNEITVLSSIEWASSIFLLLCALRN
                     FKHFITRYSQSQTLSEPLIGNHNHNHNEVHETETRKLEEPSFLSTLTFSWVNPILVLG
                     YRKPLVLEEIPHLAPIDQASVAHEKFKKAWDSLQTEKASNNVNMVPKALAKVYLREMI
                     LSGVCIFLRTISVIVSPLLLYAFVDYSNREIKDLHQGLLLVGCLILVKITESLSQRQF
                     FFNARRTGMRMRSALMVAVYEKQLKLSNLGKKRHSTGEVVNYIAVDAYRMGEFPMWFH
                     VSWSAVVQLFLAMGVLFSVVGLGVVPGLVPLIVCALLNIPFAKSMQKCQLQIMVAQDK
                     RLRSTSEVLNNMKVIKLHCWEEKFHNLIKSLREIEFRWLRESQFKRAFTAVLYWMSPT
                     LVSSVVFCGCVVLKSAPLNAATIFTILAALRSMAEPVRVLPDALSALIQVKVSFDRIN
                     SLLVDDELKDNRMKSNQDLENAMTRIRIQDGNFAWDPESPTPTLKNINLEVKCGQKVA
                     VCGSVGTGKSSILYALLGELSKTSGSVSVGIFRSIAYVSQTSWIQSGTIQDNILYGKP
                     MERSKYEKAIKACALDKDIEAFEHGDLTEIGQRGLNMSGGQKQRIQLARAVYNDADIY
                     LLDDPFSAVDAHTAATLFNDCVMSCLEKKTVILVTHQVEFLSSVDNILVMQDGQVTQS
                     GKYDDLLMAGTAFEQLVNAHKDAIIGVEPSGNTHQNDVDTDTNFIAKANSEIQLMKGL
                     PEGVQLTEEEEKEVGNVGWKPFFDYVVISEGLFYLLSCVISQTSFVALQAAASYWLAF
                     GIQIPKITTFMLIGVYTFLSTISTFFVFMRSFFGTLLGLKASKSVFDKFTDSIFRAPM
                     VFFDSTPVGRILTRASSDLSVVDFDIPVGFIYVVGSGLELLAIIFVMASVTWQVLIVA
                     VLGLAATKYVQGYYQPTARELMRINGTTKAPVMNYASETSLGVATIRAFKMQDRFFKD
                     YLKLVDTDASTFMFSNATLEWLVLRIETLANVTLFIASFLLVLLPKGFVPSGLVGLSL
                     SYALTLSGTQVFFTRWYCSLDNYVISVERIKQFMHISPEPPAIVDNNRPPSSWPSKVK
                     ISSKCTASS"
     misc_feature    620..3619
                     /gene="LOC139904386"
                     /note="multi drug resistance-associated protein (MRP);
                     Region: MRP_assoc_pro; TIGR00957"
                     /db_xref="CDD:188098"
ORIGIN      
        1 tactgcaggg ttgatcgcca tgtttcatga gtttcatttt gatatgaaga attcagtagc
       61 cgcacaaaca agtattttag acatcttcaa cttaatattt cttgttttct tctacttgct
      121 gctactagta aattatcttc gaaaaagtaa taccaacaga tccacggtaa atagtaattg
      181 gatatcacag tcagttgcat cttgttgcgt tcttacttcg gttgcatatc tgattgctgg
      241 tttatggaac acaacgcctc aattgcattg gtgggttttc gctggtaaat cgttagtttg
      301 gttaactctt acggtttctt tgctagtaca agaatttact tcttcgctga aatttataaa
      361 ttctgtgtgg tggatttttg tcttcttgtc ggtttctgtt gtgaacatca agagtttagc
      421 agaattaaac gagataacgg tcttgagttc gatagaatgg gcttctagca tcttcctttt
      481 gttatgcgct ttaagaaact tcaaacattt catcactcgc tactcacaaa gccagacgtt
      541 atcagagcct ttaattggta atcataatca taatcacaat gaagtacatg aaacggaaac
      601 acgcaaacta gaagaaccta gttttcttag tacactaacg ttttcgtggg tgaacccgat
      661 actcgtatta ggttatagaa aaccattagt tctagaagaa atcccgcatc tagcacccat
      721 agatcaagca tccgttgcac acgagaaatt caaaaaggca tgggattcac ttcaaaccga
      781 aaaggcctcg aacaacgtta acatggtacc taaagcgtta gccaaagttt atttgcgaga
      841 gatgatatta tcgggcgtat gtatctttct aaggactata tcggtcatcg ttagtccgtt
      901 gttactctat gcatttgttg actactccaa cagagagatt aaagatttac atcaaggact
      961 cttattagta ggatgtttaa ttttagtcaa gataacagag tcactgtcac aacgacaatt
     1021 tttctttaat gcacgaagaa ccggtatgag gatgaggtca gctttaatgg tggctgttta
     1081 tgagaaacaa cttaagcttt ctaatttagg aaagaaaagg cattcaacag gggaagttgt
     1141 gaattacata gctgttgatg cttacagaat gggtgagttc cctatgtggt ttcatgtcag
     1201 ttggtcagct gttgttcagt tatttctagc tatgggtgtt ttgttttcgg ttgtaggact
     1261 aggtgttgtt cctggtttag tccctttgat cgtatgtgcg cttcttaata taccgtttgc
     1321 aaaatctatg caaaagtgtc agttacagat catggttgct caagacaaga gactaagatc
     1381 gacatccgag gtccttaaca atatgaaagt cataaagtta cattgttggg aagagaagtt
     1441 tcataatttg atcaaatcgc ttagagaaat cgagtttcgt tggcttcgtg aatctcagtt
     1501 taagagggcg tttactgcag ttttgtattg gatgtcacca acgctcgttt cttcagtcgt
     1561 tttttgtgga tgtgttgttt tgaaaagtgc acctttgaat gctgctacta tatttactat
     1621 attagctgca ttacgaagta tggcggagcc cgttagagtg ttgccggatg ctctttctgc
     1681 gttgattcaa gtcaaagtat cctttgaccg aattaattct ttgttggttg acgatgaact
     1741 aaaagacaac aggatgaaaa gtaaccaaga ccttgaaaat gcaatgaccc gtatcagaat
     1801 acaggatggt aatttcgcct gggatcctga gtcgcccact ccaacactaa aaaatataaa
     1861 tcttgaagta aaatgtgggc agaaagtagc cgtttgtggg tctgttggta ctggaaaatc
     1921 gtcaatttta tacgcactcc ttggagaact atctaaaact tctggaagtg tgagtgtggg
     1981 tatttttcga tcaattgctt acgttagcca aacgtcgtgg attcaaagtg gaacaattca
     2041 agataacata ctgtatggga aacctatgga gagaagtaaa tatgaaaagg cgataaaggc
     2101 atgtgctttg gataaggata ttgaagcgtt tgaacatgga gatttaacag aaataggcca
     2161 aagaggactt aacatgagtg gtggacagaa acagaggatt cagcttgctc gagcagtcta
     2221 taatgatgct gacatctatc ttcttgatga cccgtttagc gctgtagatg cacataccgc
     2281 agcaactctc tttaatgatt gtgtcatgag ctgtttagag aagaaaacag tcattcttgt
     2341 gactcatcaa gtggagtttc tctcatcagt cgacaatatt ctggttatgc aagatggtca
     2401 agttacacaa tcaggaaagt atgatgatct gttgatggca gggacagcat ttgagcaact
     2461 tgtgaatgct cataaagatg ctattatagg tgtggaacct tctggaaata cgcatcaaaa
     2521 cgatgtggat accgatacaa atttcatagc taaagcaaac agtgaaatac aattaatgaa
     2581 gggtctacca gaaggagttc agttgaccga agaagaagaa aaagaggtcg gaaatgttgg
     2641 atggaagcct ttctttgatt acgttgttat ctcggaagga ttgttttact tgttgtcttg
     2701 tgtcataagt caaaccagtt ttgtcgctct tcaagcagca gcaagttatt ggctagcatt
     2761 cggtattcaa attcccaaaa ttaccacctt catgttgatt ggtgtttata cctttctgtc
     2821 aacaataagc acattttttg tgtttatgag atcatttttt ggtacacttt tgggattgaa
     2881 agcctcgaaa tcagtcttcg ataagttcac cgattcaata ttccgtgctc ccatggtctt
     2941 ttttgactct actccagttg gcagaattct gaccagggcc tcgtccgatc ttagtgttgt
     3001 tgattttgac atacccgttg ggttcatcta tgtggttggt tcaggtcttg aactacttgc
     3061 cataattttt gttatggctt cagtcacatg gcaagttctc attgtagccg tcctaggatt
     3121 agcggctaca aaatatgttc agggatatta tcaaccaaca gcacgggagc taatgagaat
     3181 caacggaacc acaaaagcac ctgtcatgaa ttatgcatcc gaaacatcac ttggagtcgc
     3241 aacaattcgg gcattcaaaa tgcaagacag attcttcaaa gactacctta aactggtgga
     3301 cacagatgca agcactttca tgttttcaaa tgcaacgttg gaatggttgg ttttgagaat
     3361 agaaacatta gcaaatgtga cattgttcat cgctagtttt ctcctagttt tgttaccaaa
     3421 gggttttgtg ccatcagggt tggtggggct ctctctttct tatgcgttaa ccctatcggg
     3481 tacccaagtg ttctttacta gatggtattg tagcttggac aattacgtca tttcggtaga
     3541 acgaatcaag caattcatgc acatttcacc agagccacct gcgatcgtgg acaacaatag
     3601 accaccttca tcttggcctt caaaggttaa gatatcgtcc aaatgcaccg ctagttctta
     3661 aaggtatcag ttgtacattc aaagaaggga ctcgagttgg tatcgtggga agaactggaa
     3721 gtggaaagac gacactgata acggccctgt ttcgattagt agaacctgag agcggaaaaa
     3781 ttcttataga tggattg
//
LOCUS       XM_071886326             693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small heat shock protein,
            chloroplastic-like (LOC139904387), mRNA.
ACCESSION   XM_071886326
VERSION     XM_071886326.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..693
                     /gene="LOC139904387"
                     /note="small heat shock protein, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139904387"
     CDS             1..693
                     /gene="LOC139904387"
                     /codon_start=1
                     /product="small heat shock protein, chloroplastic-like"
                     /protein_id="XP_071742427.1"
                     /db_xref="GeneID:139904387"
                     /translation="MAQSQMTLPLFSQKIITPKSTPSMIPNTHKKSPKFTIIKAGSGN
                     GDHLQRASINNPQQKQPIKRRLTQSPPIGLWDRFPTARTVQQMMDTMERLMEEPPAYG
                     SVNGGMWGPQGESTSSYSRGRTPWEIKEGEQDYKLRFDMPGMTKEDVKIYVEEKMLVL
                     KAEKIKKEGNDESNNEGEWSAKSYGKYSFRIALPENIQFEKIKAEVRDGVLYVTIPKA
                     PVTSKILDINVE"
     misc_feature    379..651
                     /gene="LOC139904387"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     Region: ACD_sHsps-like; cd06464"
                     /db_xref="CDD:107221"
     misc_feature    order(379..393,412..414,418..420,424..429,565..567,
                     625..630)
                     /gene="LOC139904387"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:107221"
ORIGIN      
        1 atggctcaaa gtcagatgac acttccactg ttctctcaaa aaatcatcac tccaaaatca
       61 accccttcta tgatcccaaa tacccataaa aagagcccta agtttactat catcaaagca
      121 ggatcaggaa atggggatca tttacaaaga gcaagtatta ataatccaca acaaaaacaa
      181 cccatcaaga gaaggctcac ccagtcacca ccaattgggt tatgggacag atttccaaca
      241 gcaagaacag tacagcaaat gatggacaca atggaaagac taatggagga gccaccagca
      301 tacggtagcg ttaacggtgg catgtgggga ccacaaggag agagtacaag tagttacagc
      361 aggggaagaa caccatggga gatcaaagaa ggtgaacaag actataaatt gaggtttgat
      421 atgcctggaa tgactaaaga agatgtgaaa atttatgtgg aagaaaaaat gttggtttta
      481 aaagcagaaa aaatcaagaa agaaggtaat gatgaaagta ataatgaagg agaatggagt
      541 gcaaagagtt atggaaagta tagttttagg attgcattgc ctgaaaatat acagtttgag
      601 aagattaagg ctgaagttag agatggagtt ttgtatgtca caatacctaa agctcccgtt
      661 acttcaaaga ttttagacat caatgtagaa tga
//
LOCUS       XM_071886327             827 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904388), mRNA.
ACCESSION   XM_071886327
VERSION     XM_071886327.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..827
                     /gene="LOC139904388"
                     /note="uncharacterized LOC139904388; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139904388"
     CDS             1..819
                     /gene="LOC139904388"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742428.1"
                     /db_xref="GeneID:139904388"
                     /translation="MGMKKGSAANTLFAWVQRQSMKVKILLALTAMVFSLAAIKSCVT
                     NYNNLFVARESIHAVGIAVLIYKLATLKTCSGLSLQTQELTALVLAARISCCVDIGFD
                     IHTFLDIAAFVSTAWVIYMMRYKLYVTYNEHLDKTPKSYLLIPCVIMAAFIHPDSSIP
                     LSTKIRWAFAVYLEAILVLPQLWMMQKTQMIETYTALYVFALGVTRFFGAAYWIIRVY
                     ESSEAYLFLLGRGYFWVPMVIVSETVQTFILADFCYYYVKSVVSGNLLVRVPRV"
     misc_feature    217..648
                     /gene="LOC139904388"
                     /note="ER lumen protein retaining receptor; Region:
                     ER_lumen_recept; pfam00810"
                     /db_xref="CDD:459945"
ORIGIN      
        1 atggggatga aaaaggggtc ggctgcaaac acattgtttg catgggttca aaggcaatcg
       61 atgaaggtga agatcttatt agctttaacg gcgatggttt tttccttagc cgctattaaa
      121 agttgcgtca caaattacaa taatctcttt gttgcaaggg aatctattca tgccgttgga
      181 atagctgttc taatatacaa gctcgcgacc ctaaaaacat gttcaggtct ttcgttgcaa
      241 acacaagagc tgacggctct agttctagct gcaagaatat cgtgttgtgt tgacattgga
      301 tttgacattc acacttttct tgacattgct gcgttcgtat ctactgcttg ggttatttac
      361 atgatgcgat ataagctata tgtgacatat aacgagcatc ttgacaaaac gcccaaatct
      421 tatttgctca ttccttgtgt gattatggct gcatttattc acccagatag ttctattccc
      481 ctttctacca aaataaggtg ggcatttgct gtctacttag aggctatttt agtacttcct
      541 caactttgga tgatgcagaa aactcagatg attgaaacat acactgctct ttatgtgttt
      601 gcacttggag tcacgagatt ttttggggcc gcctattgga ttattcgggt gtatgaatct
      661 agtgaagcgt atttgttctt actgggacgt ggttactttt gggtcccgat ggtgatagta
      721 tcagagacgg ttcaaacgtt tattttggca gacttttgtt attattatgt taaaagtgtc
      781 gtaagcggaa atcttctcgt gagagtgcca cgggtctgac acgtcat
//
LOCUS       XR_011778777             531 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904390), transcript variant X1, ncRNA.
ACCESSION   XR_011778777
VERSION     XR_011778777.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..531
                     /gene="LOC139904390"
                     /note="uncharacterized LOC139904390; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904390"
     ncRNA           1..531
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904390"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904390"
ORIGIN      
        1 gaagccgtac acatgacgga tgtagtagat attcaatgaa acagatgatt aaagtagagc
       61 attcaacttc gagtttggaa gacaagctat gtttaaagga ttcagcggaa gcttacaaga
      121 cgtgcgttgg ataaaaattt acaccaaaaa caaacataac ttgctgatta gattcatgaa
      181 aaatggaaga aggttagttt gataccacta aaattgttag ttatcgatat tgttttgatt
      241 tatttaattg gtagttaaat ttttctggtt catgtacatt tagctaaaat gttgggacca
      301 tttaagaaat gaaatggttt taagaaatat caagaggcat ctattatgat gatagcattt
      361 gacccgtttg attccaagcc atttgttcat cgagcaagtt gttgattatg gaggtgcatt
      421 tgttgtagtg ctattttcat tgtttttgaa gttttcttaa catttgaaat ttactgattt
      481 ctgtatttgt tgcgatttaa gttaggctat actgtcctat tattatatac t
//
LOCUS       XR_011778778             207 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904390), transcript variant X2, ncRNA.
ACCESSION   XR_011778778
VERSION     XR_011778778.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..207
                     /gene="LOC139904390"
                     /note="uncharacterized LOC139904390; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904390"
     ncRNA           1..207
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904390"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904390"
ORIGIN      
        1 agatgattaa agtagagcat tcaacttcga gtttggaaga caaggcataa gaaacgaaaa
       61 aacactatgg tttggcactt ggcagctatg tttaaaggat tcagcggaag cttacaagac
      121 gtgcgttgga taaaaattta caccaaaaac aaacataact tgctgattag attcatgaaa
      181 aatggaagaa ggttagtttg ataccac
//
LOCUS       XM_071886328            2777 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine protein
            phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
            (LOC139904391), transcript variant X1, mRNA.
ACCESSION   XM_071886328
VERSION     XM_071886328.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2777
                     /gene="LOC139904391"
                     /note="serine/threonine protein phosphatase 2A 55 kDa
                     regulatory subunit B beta isoform-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139904391"
     CDS             608..2146
                     /gene="LOC139904391"
                     /codon_start=1
                     /product="serine/threonine protein phosphatase 2A 55 kDa
                     regulatory subunit B beta isoform-like isoform X1"
                     /protein_id="XP_071742429.1"
                     /db_xref="GeneID:139904391"
                     /translation="MNGGDGGDVAAAPDGPPLPLDWKFSQVFGERTAGEEVQEVDIIS
                     AIEFDRSGDHLATGDRGGRVVLFERTDKKEHGGNRRNLEKTDYAISRHPEFRYKTEFQ
                     SHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKYWKVQEKKIKKIAEMS
                     MEPSKAAGNGNVSSTIVTSTHKPHLANGGYTSLSNDLLFPAGGIPSLRLPVVVTSSET
                     NLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPT
                     NMEDLTEVITSAEFHPNHCHTLAYSSSKGSIRLIDLRQSALCDKHSKLFEEHEAPGSR
                     SFFTEIIASISDIKFGRNGRYLLSRDYMTLKLWDINMDSGPVSTFQVHEHLRPRLCDL
                     YENDSIFDKFECCLSGDGQRVATGSYSNLFRVFGGHAVSTEATTLEASKNPMRRQVQT
                     PSRPSRSLSSITRAVRRGGDNPGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLY
                     MYYA"
     misc_feature    668..2143
                     /gene="LOC139904391"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; Region: CDC55;
                     COG5170"
                     /db_xref="CDD:227498"
     misc_feature    1313..1432
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1463..1585
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1637..1747
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1808..1933
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 aacggagccg cctcactaac tcagcccgat cgtatacagt cttcaacaac tatagtttat
       61 taactctcga ctaaactcac agcctgtcag taaaaatagt catcgaccaa ttaaaaatat
      121 tcacgtgtcc atattattgg atacaattct attggtgatc taaccaacat ccgtccttcg
      181 tgactttatc ataataaatt acagaaatta gaaaagagga aaaaaaattg tgtactgaga
      241 gagaaagttg tgtgtgattt tctgtatgtt tttgtgtgtg tatttggagg gcaaaatctg
      301 taaacgaaaa taattgtatt accgagagaa agttgtgtgt gatttattgg tgctgttatt
      361 gtggatgatg aaatcgatga cgaattgata atcgaatcga tgaatgaatg aatgaatgaa
      421 tgaatttgaa agcgcgatcg cttttaattt tgtttcctaa tggaattaac tgaggatttt
      481 agaagatacg ttcgtgaaga atatgataat ttgataaacg atcggttgat atttctgttg
      541 ttgaattaaa ttttagctta aattgattta tcggttaatt aactttaata aaaaaagaga
      601 agaagaaatg aacggtggcg atggcggaga tgtggcggca gctcccgacg gtccaccact
      661 tccacttgac tggaaattct ctcaggtgtt tggtgaacgt accgccggtg aagaagttca
      721 ggaagttgat attatctcgg cgattgagtt tgatagaagt ggcgaccatc ttgctactgg
      781 tgatcgtggg ggcagggtag tattatttga gaggactgat aaaaaggagc atggtggaaa
      841 tagaaggaat ttagaaaaga ctgattacgc aattagtagg catccagaat tccgctacaa
      901 aactgagttc cagagtcatg aacccgagtt cgattatttg aagagtttag agattgagga
      961 gaaaattaac aaaatcagat ggtgccaaac agccaacggg gccctctttc ttctgtctac
     1021 taatgataaa accataaaat actggaaggt ccaagagaag aagatcaaga aaattgctga
     1081 gatgagcatg gagccttcta aagcagctgg aaatggcaac gttagtagta ctattgttac
     1141 ttctacccat aagccgcatc ttgcaaatgg tggttacaca agtttaagca atgacttatt
     1201 gtttccagca gggggcatcc catcactccg tttaccagtg gtagtaacta gcagtgagac
     1261 caacctagtt gcacgatgta gaagagtgta tgctcatgct cacgactatc atatcaattc
     1321 catctcgaat aacagtgatg gcgaaacatt catctctgct gacgatcttc ggataaacct
     1381 ttggaatttg gaaatcagca accagagttt caacattgtg gatgtcaagc ctacaaacat
     1441 ggaagacctc actgaggtga ttacatcagc tgagtttcat cccaaccatt gccatacact
     1501 agcttatagt agttcgaaag gatctattcg ccttattgat ttacgccaat ctgctctttg
     1561 tgataagcat tctaaattgt ttgaagaaca cgaagcacct ggttcaagat cattttttac
     1621 cgagataata gcatcaattt cagatattaa gtttggaaga aatggaagat atctgttaag
     1681 ccgtgactat atgaccctta agttatggga cattaacatg gactctggtc cagtctcgac
     1741 attccaggtc catgaacatc taagacctag gctgtgtgat ttgtatgaaa atgattctat
     1801 ctttgataaa tttgagtgct gtctgagtgg tgatggtcag cgtgtagcaa ctggttctta
     1861 cagcaactta ttccgtgtgt ttggcggcca tgcggtaagt actgaagcaa ctaccctgga
     1921 agctagcaag aacccaatga ggaggcaagt gcagacccct tcaaggcctt ctagatccct
     1981 aagcagcatt acccgtgcag ttagacgagg tggagataac cccggggttg atgcaaatgg
     2041 aaattcattt gatttcacaa caaagttact tcatttagct tggcatccaa ccgaaaactc
     2101 aattgcttgt gctgctgcaa acagcttgta catgtattac gcatgaaaac gctccgctcc
     2161 actccccaca atttttttgt tgccaaagtt cgatcggttt tcttttctct ttttctttag
     2221 agcagccttc actcaataga tcccaaccta taacgtcctt gaagccttaa acaggtcact
     2281 ataccaaaaa accaaattta ccaattattt gctctatcat cgattcattt tatttgattc
     2341 ttttgaccta gtaaggactt tttgtatttt tatgttttgt gttgggtcga gttgaattga
     2401 gcaaaagtta ctgggatttt tattaactca aaatggaatg gaatgatgga tggatggatg
     2461 ggagtcaaat ttttaggttt aggtttagta gagaatgagc tttgctgcta actttgcagg
     2521 ccataacttt acattacttg tcttcatctt taaacttctt cagtccatta ttttagtttg
     2581 tttcaccttt ttagctactg ctagattctt tattcttaaa agtggtttgt ttggtacatt
     2641 taagggtgtt cgttttgttc cttcataaat ttgtttaaac gaccaactgt tgcctgttgg
     2701 taaagtttat tcaatgtgtt gtattgcaac ttctgtattc taatgaacct tgatgccaat
     2761 ttactgaaac ctattgg
//
LOCUS       XM_071886329            2774 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine protein
            phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
            (LOC139904391), transcript variant X2, mRNA.
ACCESSION   XM_071886329
VERSION     XM_071886329.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2774
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2774
                     /gene="LOC139904391"
                     /note="serine/threonine protein phosphatase 2A 55 kDa
                     regulatory subunit B beta isoform-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139904391"
     CDS             608..2143
                     /gene="LOC139904391"
                     /codon_start=1
                     /product="serine/threonine protein phosphatase 2A 55 kDa
                     regulatory subunit B beta isoform-like isoform X2"
                     /protein_id="XP_071742430.1"
                     /db_xref="GeneID:139904391"
                     /translation="MNGGDGGDVAAAPDGPPLPLDWKFSQVFGERTAGEEVQEVDIIS
                     AIEFDRSGDHLATGDRGGRVVLFERTDKKEHGGNRRNLEKTDYAISRHPEFRYKTEFQ
                     SHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKYWKVQEKKIKKIAEMS
                     MEPSKAAGNGNVSSTIVTSTHKPHLANGGYTSLSNDLLFPAGGIPSLRLPVVTSSETN
                     LVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTN
                     MEDLTEVITSAEFHPNHCHTLAYSSSKGSIRLIDLRQSALCDKHSKLFEEHEAPGSRS
                     FFTEIIASISDIKFGRNGRYLLSRDYMTLKLWDINMDSGPVSTFQVHEHLRPRLCDLY
                     ENDSIFDKFECCLSGDGQRVATGSYSNLFRVFGGHAVSTEATTLEASKNPMRRQVQTP
                     SRPSRSLSSITRAVRRGGDNPGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYM
                     YYA"
     misc_feature    668..2140
                     /gene="LOC139904391"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; Region: CDC55;
                     COG5170"
                     /db_xref="CDD:227498"
     misc_feature    1163..1294
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1310..1429
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1460..1582
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1634..1744
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1805..1930
                     /gene="LOC139904391"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 aacggagccg cctcactaac tcagcccgat cgtatacagt cttcaacaac tatagtttat
       61 taactctcga ctaaactcac agcctgtcag taaaaatagt catcgaccaa ttaaaaatat
      121 tcacgtgtcc atattattgg atacaattct attggtgatc taaccaacat ccgtccttcg
      181 tgactttatc ataataaatt acagaaatta gaaaagagga aaaaaaattg tgtactgaga
      241 gagaaagttg tgtgtgattt tctgtatgtt tttgtgtgtg tatttggagg gcaaaatctg
      301 taaacgaaaa taattgtatt accgagagaa agttgtgtgt gatttattgg tgctgttatt
      361 gtggatgatg aaatcgatga cgaattgata atcgaatcga tgaatgaatg aatgaatgaa
      421 tgaatttgaa agcgcgatcg cttttaattt tgtttcctaa tggaattaac tgaggatttt
      481 agaagatacg ttcgtgaaga atatgataat ttgataaacg atcggttgat atttctgttg
      541 ttgaattaaa ttttagctta aattgattta tcggttaatt aactttaata aaaaaagaga
      601 agaagaaatg aacggtggcg atggcggaga tgtggcggca gctcccgacg gtccaccact
      661 tccacttgac tggaaattct ctcaggtgtt tggtgaacgt accgccggtg aagaagttca
      721 ggaagttgat attatctcgg cgattgagtt tgatagaagt ggcgaccatc ttgctactgg
      781 tgatcgtggg ggcagggtag tattatttga gaggactgat aaaaaggagc atggtggaaa
      841 tagaaggaat ttagaaaaga ctgattacgc aattagtagg catccagaat tccgctacaa
      901 aactgagttc cagagtcatg aacccgagtt cgattatttg aagagtttag agattgagga
      961 gaaaattaac aaaatcagat ggtgccaaac agccaacggg gccctctttc ttctgtctac
     1021 taatgataaa accataaaat actggaaggt ccaagagaag aagatcaaga aaattgctga
     1081 gatgagcatg gagccttcta aagcagctgg aaatggcaac gttagtagta ctattgttac
     1141 ttctacccat aagccgcatc ttgcaaatgg tggttacaca agtttaagca atgacttatt
     1201 gtttccagca gggggcatcc catcactccg tttaccagtg gtaactagca gtgagaccaa
     1261 cctagttgca cgatgtagaa gagtgtatgc tcatgctcac gactatcata tcaattccat
     1321 ctcgaataac agtgatggcg aaacattcat ctctgctgac gatcttcgga taaacctttg
     1381 gaatttggaa atcagcaacc agagtttcaa cattgtggat gtcaagccta caaacatgga
     1441 agacctcact gaggtgatta catcagctga gtttcatccc aaccattgcc atacactagc
     1501 ttatagtagt tcgaaaggat ctattcgcct tattgattta cgccaatctg ctctttgtga
     1561 taagcattct aaattgtttg aagaacacga agcacctggt tcaagatcat tttttaccga
     1621 gataatagca tcaatttcag atattaagtt tggaagaaat ggaagatatc tgttaagccg
     1681 tgactatatg acccttaagt tatgggacat taacatggac tctggtccag tctcgacatt
     1741 ccaggtccat gaacatctaa gacctaggct gtgtgatttg tatgaaaatg attctatctt
     1801 tgataaattt gagtgctgtc tgagtggtga tggtcagcgt gtagcaactg gttcttacag
     1861 caacttattc cgtgtgtttg gcggccatgc ggtaagtact gaagcaacta ccctggaagc
     1921 tagcaagaac ccaatgagga ggcaagtgca gaccccttca aggccttcta gatccctaag
     1981 cagcattacc cgtgcagtta gacgaggtgg agataacccc ggggttgatg caaatggaaa
     2041 ttcatttgat ttcacaacaa agttacttca tttagcttgg catccaaccg aaaactcaat
     2101 tgcttgtgct gctgcaaaca gcttgtacat gtattacgca tgaaaacgct ccgctccact
     2161 ccccacaatt tttttgttgc caaagttcga tcggttttct tttctctttt tctttagagc
     2221 agccttcact caatagatcc caacctataa cgtccttgaa gccttaaaca ggtcactata
     2281 ccaaaaaacc aaatttacca attatttgct ctatcatcga ttcattttat ttgattcttt
     2341 tgacctagta aggacttttt gtatttttat gttttgtgtt gggtcgagtt gaattgagca
     2401 aaagttactg ggatttttat taactcaaaa tggaatggaa tgatggatgg atggatggga
     2461 gtcaaatttt taggtttagg tttagtagag aatgagcttt gctgctaact ttgcaggcca
     2521 taactttaca ttacttgtct tcatctttaa acttcttcag tccattattt tagtttgttt
     2581 caccttttta gctactgcta gattctttat tcttaaaagt ggtttgtttg gtacatttaa
     2641 gggtgttcgt tttgttcctt cataaatttg tttaaacgac caactgttgc ctgttggtaa
     2701 agtttattca atgtgttgta ttgcaacttc tgtattctaa tgaaccttga tgccaattta
     2761 ctgaaaccta ttgg
//
LOCUS       XM_071886331             596 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904392), mRNA.
ACCESSION   XM_071886331
VERSION     XM_071886331.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..596
                     /gene="LOC139904392"
                     /note="uncharacterized LOC139904392; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904392"
     CDS             8..427
                     /gene="LOC139904392"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742432.1"
                     /db_xref="GeneID:139904392"
                     /translation="MSSKTLIRTGASLMTRIMNPVYHHNPNHNLIPQIFEITPKVYTP
                     PPFPFLNLIQNDAETLTRVSSEGFLYPCGLPSLRFFLPDGDDSSSSEPMLCIKRTYQP
                     SNLRRKRVHGYLARKATKGGRRVIARRIAKGRFRITA"
     misc_feature    296..421
                     /gene="LOC139904392"
                     /note="Ribosomal protein L34; Region: Ribosomal_L34;
                     pfam00468"
                     /db_xref="CDD:425699"
ORIGIN      
        1 cggaaaaatg tcctctaaaa ccctaattcg caccggagcg tcgctgatga cccgtattat
       61 gaacccggtt tatcaccata acccgaacca caacctcatt ccccaaatat ttgaaatcac
      121 accgaaggtt tacaccccac ccccatttcc ttttttgaat ttgattcaaa acgacgccga
      181 gacactaact agggtttctt ctgaaggttt cttgtatccg tgcggacttc cttcgttaag
      241 attcttcctt cctgacggag atgattcttc ctcaagtgaa ccaatgttgt gcattaagag
      301 aacataccaa cctagcaacc ttcgacgcaa aagggttcat ggttacttgg ctcgcaaagc
      361 gaccaaagga ggtagacgag ttattgctag aagaattgct aagggtcggt tcagaatcac
      421 agcttaaaaa atcctatatt tcccaggaag agtagatttt gtttagcttg aattatgcac
      481 ttatatataa agacatttgt ataagtgatt tggatcattt ggtccctttt tgagatatga
      541 tgcaaatttt gggatcattt gcagattttc ttgttaattg ttttggttat tttgtc
//
LOCUS       XM_071886332            1101 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative RING-H2 finger
            protein ATL21A (LOC139904393), mRNA.
ACCESSION   XM_071886332
VERSION     XM_071886332.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1101
                     /gene="LOC139904393"
                     /note="putative RING-H2 finger protein ATL21A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904393"
     CDS             232..942
                     /gene="LOC139904393"
                     /codon_start=1
                     /product="putative RING-H2 finger protein ATL21A"
                     /protein_id="XP_071742433.1"
                     /db_xref="GeneID:139904393"
                     /translation="MKSCKFYILIFFIFTFIKVLDGKYTSEICNHDKPHIQFPFKVNS
                     FCKNNITMINFRSYGDLGVKSISYDHHKLTLFDPKDCVFQVFMNLDLSSTPFRYYHVV
                     KNYTYFNCSVKLPGSFEQVPCLSGSKHHVYVEDSSLNVPNSCKTVKTVSIPFAYSSYV
                     SDDSFGLDLTWDSAGFKDIAKDKPGWFRFQSIGEELSIAVLVLLIVGLACIKAYYLKK
                     SQSTELENEKLLGDLESL"
ORIGIN      
        1 taaaaagaaa acaccttttc tttataatca tatataaccc ccttactctt catgcatcac
       61 aatttctacc caatttctta ctcagtctcc ccccaaaatt aaagcagttg aactctccag
      121 actccacaag tatgacaaca gacagttgaa caacttatta caactaccca acaagttaac
      181 ttctcttacc ggccaacttc attttcttga atccaattca ctcatctttc aatgaaatct
      241 tgcaagtttt acattcttat tttcttcatc tttacattca ttaaggttct tgatggcaaa
      301 tatacttctg aaatctgtaa ccatgataaa ccccacattc aatttccatt caaagtcaac
      361 tcattttgca aaaacaacat aaccatgatc aattttcgaa gttatggtga tttgggagtg
      421 aaatccatct cttatgatca ccataaactc actctgtttg acccgaaaga ttgtgtcttt
      481 caagtgttca tgaatcttga tctttcttca acgccttttc ggtactatca tgtcgtcaaa
      541 aactatacat actttaattg ctcggttaag cttccgggtt ctttcgaaca agttccatgt
      601 ttaagtggtt ctaaacatca tgtttatgtt gaggattcat ctttaaatgt gcccaattct
      661 tgtaaaactg tgaaaaccgt ctcaattcca tttgcgtata gttcttacgt ttctgatgac
      721 agtttcggtc tcgatttgac gtgggattcg gccggtttta aagatattgc aaaagataaa
      781 ccaggctggt ttcgttttca atccattgga gaagaactaa gtattgcggt tttggttcta
      841 ttgattgtgg gattagcatg cataaaggca tactatttga agaaatcgca aagcacggaa
      901 cttgaaaacg agaagttact tggagatctt gaatcgttgt gatcataatt gtgatcaaaa
      961 gtatctttag atatgtatat atgtgtatca tttagactat gatggtaaaa tttgcagaaa
     1021 atgtcacaag ctttaaagtt agtcgataga tcgataatca gtttcgtcac agaagataat
     1081 cttttaggtt gtaaaccttg t
//
LOCUS       XM_071886333             604 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            GIS3-like (LOC139904394), mRNA.
ACCESSION   XM_071886333
VERSION     XM_071886333.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..604
                     /gene="LOC139904394"
                     /note="zinc finger protein GIS3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139904394"
     CDS             71..604
                     /gene="LOC139904394"
                     /codon_start=1
                     /product="zinc finger protein GIS3-like"
                     /protein_id="XP_071742434.1"
                     /db_xref="GeneID:139904394"
                     /translation="MGVIENHYQANPTNNTTTTTTTKLKLFGFNVKEHEEVIGPTKKP
                     HILSDGRKHDCQYCGREFANSQALGGHQNAHKKERHLLKRAQIQATRKSCIKSPIIPT
                     FSPPPQHGRRMILPSTGIIFPSWAYDPCAPPAYYGSHSRIGEYSAEPSSRADHGFTSV
                     DGGPGFDVFGLDLHLRL"
     misc_feature    227..304
                     /gene="LOC139904394"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 ttgatcacgc atgtatccat cgatctcata aaaccataca ttatatacac ccacgcatat
       61 attgtttatc atgggagtaa ttgaaaatca ttatcaagcc aatcctacaa ataatacaac
      121 aacaacaaca accaccaagt taaagctctt tggattcaac gtaaaggagc acgaagaagt
      181 catcgggccc acaaaaaagc cacatatctt atccgatggc cggaaacatg attgtcaata
      241 ttgtggccgt gagtttgcaa actcacaagc tcttggtggc caccaaaacg ctcataaaaa
      301 agagcgtcat ctattaaagc gcgctcaaat ccaagccact cgaaaatcat gcataaaaag
      361 tccaatcatt ccaacattta gtcctccacc tcaacacggc cgtaggatga tacttccatc
      421 cactgggatt atttttccat catgggctta tgatccatgc gcgcctccag cttattacgg
      481 gtcccacagc cgtattggag agtactcggc tgagcctagt agccgagccg atcatgggtt
      541 caccagtgtg gatggtggac ctggttttga tgtatttggg cttgatttgc atttaagact
      601 ttaa
//
LOCUS       XM_071886334             997 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904395), mRNA.
ACCESSION   XM_071886334
VERSION     XM_071886334.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..997
                     /gene="LOC139904395"
                     /note="uncharacterized LOC139904395; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904395"
     CDS             13..804
                     /gene="LOC139904395"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742435.1"
                     /db_xref="GeneID:139904395"
                     /translation="MAYIPTRFKRITAAFDDDARARLCQSSSGSEHLAENSVTDLSDL
                     VDSFFEVDVNDRFESNVEKRLEEKASQDAGGFLGTDTDTKETLIELIGGSNDDEDDRT
                     KRAIRFELETVCWNLNDASNKRNIMTLLRQKGFDAGLCKSRWGKTGGHPGGEYEYVDV
                     LLSGDRYIVEVSIGAEFTIARPTKAYESLLDIMPKFMVIKPNELKKVVRLMCAEMRTS
                     LRSREMLISPWRKNGYMQSKWFGSYKRTTNFITAVVGNGEGEFTG"
     misc_feature    142..747
                     /gene="LOC139904395"
                     /note="PDDEXK-like family of unknown function; Region:
                     PDDEXK_6; pfam04720"
                     /db_xref="CDD:428087"
ORIGIN      
        1 aatcacacaa atatggcata tattccaacg agattcaagc gaatcacagc agcgtttgac
       61 gatgatgcta gggcacgatt atgccagagt agtagcggaa gcgagcattt ggccgagaac
      121 tcggtgacgg atctttccga tttagttgac tcgttttttg aagtagatgt taacgatcga
      181 tttgaatcca acgttgaaaa acgtcttgaa gagaaggcat ctcaggatgc gggcggattt
      241 ttaggtaccg atactgatac taaagaaacg ctgattgaat tgatcggtgg tagtaacgat
      301 gatgaagatg accgtacgaa acgtgcaatt cgtttcgagt tagaaactgt gtgttggaat
      361 ttgaatgatg cttcaaataa gagaaatata atgactttac ttcgtcaaaa aggattcgat
      421 gcaggtcttt gtaagtcacg atgggggaaa acaggagggc atccaggtgg tgaatacgaa
      481 tacgtcgacg ttttattatc aggtgaccgt tacattgttg aagtatcaat aggagctgaa
      541 tttacaatcg cacggccgac taaagcttac gaatcgttac tcgatataat gccgaaattt
      601 atggtgatta aacctaatga attaaagaag gtagttaggc taatgtgcgc tgagatgaga
      661 acgtcactaa gatcacgaga aatgttgata tcgccttgga gaaaaaacgg atacatgcaa
      721 tcgaaatggt tcggatcgta taaaaggaca acgaacttta taaccgcggt ggtgggaaac
      781 ggtgagggtg agtttaccgg ttagagtttg ttagggtttg agtattcagc ggcggttggt
      841 ggtggtagaa gtaattgtag gaaggtggtt gggagattgc atgtggttag taatttcaaa
      901 gctcgattgt tgagtggcgt gtcttagtag atcgaggggt gtaagtgtaa aatcttttta
      961 atagtttatt gttttagacg aatttggata aggttta
//
LOCUS       XR_011778779             567 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904396), ncRNA.
ACCESSION   XR_011778779
VERSION     XR_011778779.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139904396"
                     /note="uncharacterized LOC139904396; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904396"
     ncRNA           1..567
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904396"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904396"
ORIGIN      
        1 aaaaaacaaa tccttggagc agcttactac cgtcacgtca ctgtcatcac cgccttcgtt
       61 tacatcgccg gcgcaacaac ccacggcttc cttaccgatc gtctctgacg taagcaccac
      121 cggcttctta gtgtttgagt ccggtcttac caacttatgc aatcgcttct tccgctagaa
      181 ctaagagaat gaacttatag tcatgacaac atcatatctt atgccaagta cgttcatcgt
      241 gcaattgggg cccgacgaag tgcgacgcct caatctttat ctagttcatg ttgttttcgt
      301 cttccttttc tgttaattaa tcggtgtagc gaaattaatc ggaaacacac cagcagcgga
      361 agcatcggta attgaagaaa aagtgttgcc tagccaccgt ttacaaccaa aagcaaaatt
      421 tgcacttttt aacgaccgag gcgaaaatga agcatctcaa tataaagatg aagcaatttg
      481 agccctcttt tgtgaatttg cactgtttta ttcaattctt ttgctaaacg agacaaagat
      541 atgatgcacc ttaaccaact ccagcaa
//
LOCUS       XM_071886335             622 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904397), mRNA.
ACCESSION   XM_071886335
VERSION     XM_071886335.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..622
                     /gene="LOC139904397"
                     /note="uncharacterized LOC139904397; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904397"
     CDS             15..503
                     /gene="LOC139904397"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742436.1"
                     /db_xref="GeneID:139904397"
                     /translation="MDMAHYIPKNYDVQTAPIRRRLFKGFKDSQNVLLSDVEKMLLKS
                     DHRRISDDDVVRLAIILIVERGFMGKQGIHVVNKKFLWLVEELSPVNQYPWGSRIWEP
                     TYEAVSEGFVIRESQLESGKAYTLAGFMLAFKIWILESYRRTIKPFAKKTDKNGVPRA
                     LF"
     misc_feature    <90..302
                     /gene="LOC139904397"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 tgtttagtag ccggatggac atggcacatt acatcccgaa gaattatgac gtccagaccg
       61 cacctattag acgacgttta tttaagggtt ttaaagattc tcaaaatgtt ttgcttagtg
      121 atgttgaaaa gatgctttta aaatctgatc acaggcgtat tagtgacgat gatgtggtgc
      181 gattagcaat tatcttgatt gtagagagag gttttatggg taaacaaggg atccatgttg
      241 tgaataagaa gtttttatgg ctagtcgaag agttatcgcc tgttaatcag tacccatggg
      301 ggtctcgtat ttgggagcca acttacgaag cggttagtga agggtttgtt attcgtgaaa
      361 gccaattaga gagtggaaag gcgtacactt tggcgggatt tatgttggct ttcaagattt
      421 ggattctcga gtcttaccgt cgtaccatta aaccgtttgc aaaaaagact gacaagaatg
      481 gagtaccgag ggctcttttt tgaaagcgtt catctgccga gtcatttgga atgtctgaat
      541 accttaaact cctacatatt caggatgagt gtcccaagaa aaagagacct ttacatggtc
      601 tgcagccaac tgaaacagag ca
//
LOCUS       XM_071886336            1891 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DEAD-box ATP-dependent RNA
            helicase 20-like (LOC139904398), transcript variant X1, mRNA.
ACCESSION   XM_071886336
VERSION     XM_071886336.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1891
                     /gene="LOC139904398"
                     /note="DEAD-box ATP-dependent RNA helicase 20-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 23 Proteins"
                     /db_xref="GeneID:139904398"
     CDS             103..1614
                     /gene="LOC139904398"
                     /codon_start=1
                     /product="DEAD-box ATP-dependent RNA helicase 20-like"
                     /protein_id="XP_071742437.1"
                     /db_xref="GeneID:139904398"
                     /translation="MSRYDSRSGDPGSYRDRKSDSGFGGGSIVVGHSSSSKRDNETTE
                     PPLKVDLDGLTPFEKNFYVESPNVAKMSESEVEEYRTKREITVEGRDVPKPVKTFEDA
                     RFPEYVMQEIVKAGFTEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVN
                     AQPILSHGDGPIVLVLAPTRELAVQIQQEASKFGASSKIKNTCIYGGVPKGPQVRDLQ
                     KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDR
                     QTLYWSATWPKEVELLARQFLYNPYKVVIGSSDLKANHSIQQHVDIVTENQKYNKLVK
                     LLDDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGK
                     SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
                     ARFAKELIAILQEAGQKVNPDLAAMGRGAPPPPPGRGGFRDRGRGYSGGRSWN"
     misc_feature    262..1518
                     /gene="LOC139904398"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(451..453,457..465,472..474,526..549)
                     /gene="LOC139904398"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350724"
ORIGIN      
        1 tcaccaaaca agtcggttag ctcgattctg aggctaacat attagccgaa ctatcaacaa
       61 tcaatcttca tacgcaccta cggcataata atatatacat acatgagtcg ttacgacagc
      121 cgttccggtg atcctggttc atatcgcgac cggaaaagtg attcagggtt tggtggaggt
      181 tccattgttg ttgggcacag ttcatctagt aaaagggaca atgaaacaac agagcctccg
      241 ttgaaggtgg atttggatgg actgactcca tttgaaaaga atttctatgt ggagtctccg
      301 aatgttgcga aaatgtctga gagtgaggtg gaagaatata ggacaaagcg agaaatcact
      361 gttgaaggtc gcgatgtgcc taagcctgtt aagacttttg aagatgctag atttccagaa
      421 tatgttatgc aagaaatcgt gaaagcaggc ttcacagagc ctactgcaat tcaagctcaa
      481 ggatggccaa tggctttaaa gggtcgggat ctcattggaa tcgctgaaac tggatccggg
      541 aagactcttg cttatttgtt gcctgccatt gttcatgtta atgctcaacc aatcttatct
      601 catggggatg gaccaatcgt gttagtttta gctccaactc gtgagcttgc tgttcaaata
      661 caacaggaag caagtaaatt tggtgcgtca tcgaagatta aaaacacttg catttacggt
      721 ggggttccaa agggtccgca agttcgtgat ttacagaaag gtgttgaaat tgttattgcg
      781 acccctggaa gactgataga tatgttggag tctcatcata caaacttgcg aagggttact
      841 tatcttgtgt tggatgaagc tgaccgtatg ttagacatgg gatttgaacc tcaaatgaag
      901 aaaattgttt cacagattcg tccggatcgt caaactttat actggagtgc tacatggcct
      961 aaggaagttg agctgcttgc aagacagttt ctgtataacc catacaaagt ggtcattggt
     1021 tcctcagact tgaaagctaa ccattcaatt cagcaacatg tggatattgt gactgagaat
     1081 cagaagtata acaaattagt gaagctgctg gatgatataa tggatggcag tcgcatattg
     1141 atatttatgg ataccaaaaa ggggtgtgac caaatcactc gtcagctaag gatggatggt
     1201 tggcctgctt tatcaattca tggagataaa agtcaagcag agagggattg ggttttatct
     1261 gagttcaaag ctggtaaaag cccaattatg acagcaaccg atgttgcagc tcgtgggcta
     1321 gatgtgaagg acgtgaaata tgtgatcaat tatgatttcc cgggttcact agaggattat
     1381 gttcatcgaa ttggtcgaac aggaagagct ggagccaaag ggacagctta caccttcttt
     1441 actgctgcaa atgccagatt tgccaaagaa cttatcgcca ttctccagga agcgggtcag
     1501 aaagtcaacc ctgatctagc tgcaatgggc cgtggtgcac ctcctcctcc tccagggcgt
     1561 ggcggatttc gtgatcgtgg tcggggttac agcggtggtc gatcttggaa ctgatgggct
     1621 ataacattga caactcgtga ggtaccaaga ggtcgatact actaacattt taaaattttt
     1681 aacgagttgg ttggatcttt tgatatcact ttgaacccta tttgtttagg cagttatcac
     1741 ccacttgaat tttctgttac gtgctggttg gctggacttt gaatctattt cagacatcaa
     1801 aattagtgtt aagattagca ccatctatac catgtatgtg tacgctatct ggctcttgaa
     1861 aacattgtaa catatgtttg tttatgttct t
//
LOCUS       XM_071886337            1928 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DEAD-box ATP-dependent RNA
            helicase 20-like (LOC139904398), transcript variant X2, mRNA.
ACCESSION   XM_071886337
VERSION     XM_071886337.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1928
                     /gene="LOC139904398"
                     /note="DEAD-box ATP-dependent RNA helicase 20-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 23 Proteins"
                     /db_xref="GeneID:139904398"
     CDS             103..1614
                     /gene="LOC139904398"
                     /codon_start=1
                     /product="DEAD-box ATP-dependent RNA helicase 20-like"
                     /protein_id="XP_071742438.1"
                     /db_xref="GeneID:139904398"
                     /translation="MSRYDSRSGDPGSYRDRKSDSGFGGGSIVVGHSSSSKRDNETTE
                     PPLKVDLDGLTPFEKNFYVESPNVAKMSESEVEEYRTKREITVEGRDVPKPVKTFEDA
                     RFPEYVMQEIVKAGFTEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVN
                     AQPILSHGDGPIVLVLAPTRELAVQIQQEASKFGASSKIKNTCIYGGVPKGPQVRDLQ
                     KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDR
                     QTLYWSATWPKEVELLARQFLYNPYKVVIGSSDLKANHSIQQHVDIVTENQKYNKLVK
                     LLDDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGK
                     SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
                     ARFAKELIAILQEAGQKVNPDLAAMGRGAPPPPPGRGGFRDRGRGYSGGRSWN"
     misc_feature    262..1518
                     /gene="LOC139904398"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(451..453,457..465,472..474,526..549)
                     /gene="LOC139904398"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350724"
ORIGIN      
        1 tcaccaaaca agtcggttag ctcgattctg aggctaacat attagccgaa ctatcaacaa
       61 tcaatcttca tacgcaccta cggcataata atatatacat acatgagtcg ttacgacagc
      121 cgttccggtg atcctggttc atatcgcgac cggaaaagtg attcagggtt tggtggaggt
      181 tccattgttg ttgggcacag ttcatctagt aaaagggaca atgaaacaac agagcctccg
      241 ttgaaggtgg atttggatgg actgactcca tttgaaaaga atttctatgt ggagtctccg
      301 aatgttgcga aaatgtctga gagtgaggtg gaagaatata ggacaaagcg agaaatcact
      361 gttgaaggtc gcgatgtgcc taagcctgtt aagacttttg aagatgctag atttccagaa
      421 tatgttatgc aagaaatcgt gaaagcaggc ttcacagagc ctactgcaat tcaagctcaa
      481 ggatggccaa tggctttaaa gggtcgggat ctcattggaa tcgctgaaac tggatccggg
      541 aagactcttg cttatttgtt gcctgccatt gttcatgtta atgctcaacc aatcttatct
      601 catggggatg gaccaatcgt gttagtttta gctccaactc gtgagcttgc tgttcaaata
      661 caacaggaag caagtaaatt tggtgcgtca tcgaagatta aaaacacttg catttacggt
      721 ggggttccaa agggtccgca agttcgtgat ttacagaaag gtgttgaaat tgttattgcg
      781 acccctggaa gactgataga tatgttggag tctcatcata caaacttgcg aagggttact
      841 tatcttgtgt tggatgaagc tgaccgtatg ttagacatgg gatttgaacc tcaaatgaag
      901 aaaattgttt cacagattcg tccggatcgt caaactttat actggagtgc tacatggcct
      961 aaggaagttg agctgcttgc aagacagttt ctgtataacc catacaaagt ggtcattggt
     1021 tcctcagact tgaaagctaa ccattcaatt cagcaacatg tggatattgt gactgagaat
     1081 cagaagtata acaaattagt gaagctgctg gatgatataa tggatggcag tcgcatattg
     1141 atatttatgg ataccaaaaa ggggtgtgac caaatcactc gtcagctaag gatggatggt
     1201 tggcctgctt tatcaattca tggagataaa agtcaagcag agagggattg ggttttatct
     1261 gagttcaaag ctggtaaaag cccaattatg acagcaaccg atgttgcagc tcgtgggcta
     1321 gatgtgaagg acgtgaaata tgtgatcaat tatgatttcc cgggttcact agaggattat
     1381 gttcatcgaa ttggtcgaac aggaagagct ggagccaaag ggacagctta caccttcttt
     1441 actgctgcaa atgccagatt tgccaaagaa cttatcgcca ttctccagga agcgggtcag
     1501 aaagtcaacc ctgatctagc tgcaatgggc cgtggtgcac ctcctcctcc tccagggcgt
     1561 ggcggatttc gtgatcgtgg tcggggttac agcggtggtc gatcttggaa ctgatgggct
     1621 ataacattga caactcgtga gtgtgccgta agttatcccc agataatagt caagatatga
     1681 atatgctgaa aaaattaggg aggcaagtat caggaacatt aactcgtaat tcgatttcct
     1741 aaccatgtga acttttaact tttacgtgac tttttttttt cttttgcgaa caacacgcgt
     1801 gcgcagatac atacgcacac tttttgtccc tgactcgaac tcacaacctt gagttcctaa
     1861 tgttgggtca gaaaccactt ggttttacgt gactttttaa gcagagtagt attttatgat
     1921 ttatgatt
//
LOCUS       XM_071886338            1660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DEAD-box ATP-dependent RNA
            helicase 20-like (LOC139904398), transcript variant X3, mRNA.
ACCESSION   XM_071886338
VERSION     XM_071886338.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1660
                     /gene="LOC139904398"
                     /note="DEAD-box ATP-dependent RNA helicase 20-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 23 Proteins"
                     /db_xref="GeneID:139904398"
     CDS             103..1614
                     /gene="LOC139904398"
                     /codon_start=1
                     /product="DEAD-box ATP-dependent RNA helicase 20-like"
                     /protein_id="XP_071742439.1"
                     /db_xref="GeneID:139904398"
                     /translation="MSRYDSRSGDPGSYRDRKSDSGFGGGSIVVGHSSSSKRDNETTE
                     PPLKVDLDGLTPFEKNFYVESPNVAKMSESEVEEYRTKREITVEGRDVPKPVKTFEDA
                     RFPEYVMQEIVKAGFTEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVN
                     AQPILSHGDGPIVLVLAPTRELAVQIQQEASKFGASSKIKNTCIYGGVPKGPQVRDLQ
                     KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDR
                     QTLYWSATWPKEVELLARQFLYNPYKVVIGSSDLKANHSIQQHVDIVTENQKYNKLVK
                     LLDDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGK
                     SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
                     ARFAKELIAILQEAGQKVNPDLAAMGRGAPPPPPGRGGFRDRGRGYSGGRSWN"
     misc_feature    262..1518
                     /gene="LOC139904398"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(451..453,457..465,472..474,526..549)
                     /gene="LOC139904398"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350724"
ORIGIN      
        1 tcaccaaaca agtcggttag ctcgattctg aggctaacat attagccgaa ctatcaacaa
       61 tcaatcttca tacgcaccta cggcataata atatatacat acatgagtcg ttacgacagc
      121 cgttccggtg atcctggttc atatcgcgac cggaaaagtg attcagggtt tggtggaggt
      181 tccattgttg ttgggcacag ttcatctagt aaaagggaca atgaaacaac agagcctccg
      241 ttgaaggtgg atttggatgg actgactcca tttgaaaaga atttctatgt ggagtctccg
      301 aatgttgcga aaatgtctga gagtgaggtg gaagaatata ggacaaagcg agaaatcact
      361 gttgaaggtc gcgatgtgcc taagcctgtt aagacttttg aagatgctag atttccagaa
      421 tatgttatgc aagaaatcgt gaaagcaggc ttcacagagc ctactgcaat tcaagctcaa
      481 ggatggccaa tggctttaaa gggtcgggat ctcattggaa tcgctgaaac tggatccggg
      541 aagactcttg cttatttgtt gcctgccatt gttcatgtta atgctcaacc aatcttatct
      601 catggggatg gaccaatcgt gttagtttta gctccaactc gtgagcttgc tgttcaaata
      661 caacaggaag caagtaaatt tggtgcgtca tcgaagatta aaaacacttg catttacggt
      721 ggggttccaa agggtccgca agttcgtgat ttacagaaag gtgttgaaat tgttattgcg
      781 acccctggaa gactgataga tatgttggag tctcatcata caaacttgcg aagggttact
      841 tatcttgtgt tggatgaagc tgaccgtatg ttagacatgg gatttgaacc tcaaatgaag
      901 aaaattgttt cacagattcg tccggatcgt caaactttat actggagtgc tacatggcct
      961 aaggaagttg agctgcttgc aagacagttt ctgtataacc catacaaagt ggtcattggt
     1021 tcctcagact tgaaagctaa ccattcaatt cagcaacatg tggatattgt gactgagaat
     1081 cagaagtata acaaattagt gaagctgctg gatgatataa tggatggcag tcgcatattg
     1141 atatttatgg ataccaaaaa ggggtgtgac caaatcactc gtcagctaag gatggatggt
     1201 tggcctgctt tatcaattca tggagataaa agtcaagcag agagggattg ggttttatct
     1261 gagttcaaag ctggtaaaag cccaattatg acagcaaccg atgttgcagc tcgtgggcta
     1321 gatgtgaagg acgtgaaata tgtgatcaat tatgatttcc cgggttcact agaggattat
     1381 gttcatcgaa ttggtcgaac aggaagagct ggagccaaag ggacagctta caccttcttt
     1441 actgctgcaa atgccagatt tgccaaagaa cttatcgcca ttctccagga agcgggtcag
     1501 aaagtcaacc ctgatctagc tgcaatgggc cgtggtgcac ctcctcctcc tccagggcgt
     1561 ggcggatttc gtgatcgtgg tcggggttac agcggtggtc gatcttggaa ctgatgggct
     1621 ataacattga caactcgtga ggtacaacgt tgaatatatt
//
LOCUS       XM_071886339             899 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides PRA1 family protein F3-like
            (LOC139904399), mRNA.
ACCESSION   XM_071886339
VERSION     XM_071886339.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..899
                     /gene="LOC139904399"
                     /note="PRA1 family protein F3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904399"
     CDS             233..796
                     /gene="LOC139904399"
                     /codon_start=1
                     /product="PRA1 family protein F3-like"
                     /protein_id="XP_071742440.1"
                     /db_xref="GeneID:139904399"
                     /translation="MSTYGTIPDSSDTSAVGITKAEFLTRAIKRIKTNLGVKRPWKEM
                     FSIHSLNLPHGFPDTISRTKTNVAYFRMNYAIIVLGVLFLSLIWHPISLIVFIVLMAV
                     WLFLYLLRDEPLVILHYTIDDRVILTVLSVVTTCLLLLTGTTLNILVSVMIGVAVVLI
                     HAIFRKNDDLCLDEDGAEADGFLPASA"
     misc_feature    347..751
                     /gene="LOC139904399"
                     /note="PRA1 family protein; Region: PRA1; pfam03208"
                     /db_xref="CDD:460846"
ORIGIN      
        1 agggcagttg aatatgtcgt atccaataat aagatccgat ccaacaataa aattaaatga
       61 aattcagttg aaaaatgtaa cttgcaccac attagacttc acctgtagta gtccatttac
      121 tcttccatta ttaatattcc ccatcactct cattttctct aaaacatctt tctcatttac
      181 tctccaaaaa cactcgtaac ccttgttcta ctactccttt ccctccgcaa caatgtcgac
      241 ttacggcaca attccagact catccgacac cagtgctgtt ggcatcacta aggccgagtt
      301 cctaactcgc gcaattaaac gcataaaaac aaacctcggt gtaaaaagac catggaaaga
      361 aatgttcagc atacattcat taaacctccc acatggtttc cctgatacca tttcaagaac
      421 caagacaaat gttgcatact ttcgtatgaa ctacgcgata attgtcctag gagttttgtt
      481 cctaagtttg atatggcatc caatatcact aattgttttt attgtcctga tggcagtttg
      541 gttgttcctt taccttttac gcgatgaacc acttgtgata cttcattaca cgattgatga
      601 tcgtgtaatt ctcacggttt tgtcagttgt tactacttgt ttgttgttgt tgacaggtac
      661 aacgttgaat atattggtgt cggtaatgat tggtgttgcg gttgttttga ttcatgcgat
      721 ctttagaaag aatgatgatt tgtgtttaga tgaagatggt gctgaagcag acggattttt
      781 gcctgcttct gcttaattgt agtttgtata tgctctttga ttatggaacg aaagactcgg
      841 agttgccagt tttatgtatt agtgatgagt ttctaatatt taagttgcaa aatgcatga
//
LOCUS       XM_071886340             841 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904400), mRNA.
ACCESSION   XM_071886340
VERSION     XM_071886340.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..841
                     /gene="LOC139904400"
                     /note="uncharacterized LOC139904400; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904400"
     CDS             130..603
                     /gene="LOC139904400"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742441.1"
                     /db_xref="GeneID:139904400"
                     /translation="MDEFRGNYIPPFGSWDCNNHLQFSQCFESATKGGFIGYGFGYPQ
                     DRDLYVAGDLYENNVATPAMIVVPRRRRKAPVSERKKESWVVCNYDYDFVHGGKVAPA
                     PEEYNRNHVNVNVKPKAVDEDLYKISPELLRVPPRRKKSKRWGLFSMCMLPTCVM"
ORIGIN      
        1 ctcaccaaac caaacattca ttaattccac attccctcta cttgccctat ataaatcaac
       61 caacacattc ctccaaatcc tatcctatcc tttttaacat cacagcaacg aaacaaacta
      121 caaaaaacta tggatgaatt tagaggaaac tatataccgc cgtttggaag ttgggattgt
      181 aacaatcatc ttcagttttc tcaatgtttt gaatcagcta caaaaggtgg ttttattggt
      241 tatgggtttg gttacccaca agatcgtgat ctttacgtcg ccggtgatct ttacgaaaac
      301 aatgtcgcta ctccggccat gatcgtcgtt cctcgccgcc gtagaaaagc tccggtgagt
      361 gaacgaaaga aggaatcgtg ggtggtatgt aattatgatt acgactttgt gcatggcggg
      421 aaagtagctc cggcgccgga ggaatacaat cggaatcatg ttaatgttaa tgtcaaacca
      481 aaggctgttg atgaggattt gtacaagatc tcgccggagc tcctccgtgt gccgccgaga
      541 aggaagaaga gcaagaggtg ggggttgttc tcaatgtgca tgttacctac ttgtgttatg
      601 tgagagaccc ttttactaca aaatatttag atgaatatca gagttatata tagatgtgtg
      661 ttagctattc atagtgaaaa tggcccatgg acatgaagtt atgaagatca agatgaagct
      721 ttgagccttt gaagatgaac atctagaatt aatgttctca tttttgtagt tgtgtggatt
      781 ccattttgtg taatttcaag aattgagttg tgggccatta gtattatata aactttttaa
      841 t
//
LOCUS       XR_011778780             717 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904401), ncRNA.
ACCESSION   XR_011778780
VERSION     XR_011778780.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..717
                     /gene="LOC139904401"
                     /note="uncharacterized LOC139904401; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904401"
     ncRNA           1..717
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904401"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904401"
ORIGIN      
        1 atggcattct gcatactttg tcattcattc ttattatcat catgggcccg ttttttcaga
       61 atcaatatgg ttaatgttta atttgacttc agcaggtaac ttatctcatg atctatattt
      121 aataatattc atattattag tgttattgtt attatgctaa atttataaat tgaattcctt
      181 ccatccgaag aacggcacgt caccggataa tctgatccct tcaaggtaca gtctattaaa
      241 cgatttaggg ttggagcgtt tgctaatctg caacgaattg gagttttcgg ttctctgaaa
      301 cgatttaggg ttgcagtgat ttttttgaaa cgttcacttt tatcaaacga gtaattttgt
      361 aatagtttat ttttttcttt tgtggatacc ataatcagag ctacaaatgt tctaaactat
      421 cattgaattc aaacgaccat tgattacatc tgtgctttta gggttctgca gtaccgagga
      481 tttgagaatg gctcgattta gacagatttt aagacgattc aataaagaca tttatctgtc
      541 atggttgaag aaaagagtga attatcagtt ttgtgatggt tgaggttgta ttcgaagcta
      601 cctttgcact ttaaatctgt atttgttgtt tcatgttgtc cacggtaata tattttgttg
      661 cctttgtgtt ttcacatgtt gttgtcgaat gatattgttg tgtcctacta tattaaa
//
LOCUS       XM_071886341            1452 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides triacylglycerol lipase
            OBL1-like (LOC139904402), mRNA.
ACCESSION   XM_071886341
VERSION     XM_071886341.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1452
                     /gene="LOC139904402"
                     /note="triacylglycerol lipase OBL1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139904402"
     CDS             1..1443
                     /gene="LOC139904402"
                     /codon_start=1
                     /product="triacylglycerol lipase OBL1-like"
                     /protein_id="XP_071742442.1"
                     /db_xref="GeneID:139904402"
                     /translation="MASKEKYCKDYLVVDAKQASLYDIACILICSTNSLNDKFFYEER
                     CEGSNKSTTKENLLRRWLIFNSVLAQKFLIWADTPMAKIGSFIELWLNLLACNGGFFG
                     LVMNYVRGKMVRPSSEKFVSIVGELDSRLELDKSIAKGDGRYNSSLSMMASKLCYESK
                     AFVKAAVEDHLKMEFIDSYEFRNDYKNTIRTHASMFQDQKSNPNLIAVAFRGTLPFNA
                     NDWMTDFDISWYELKDMSNSQTIGRIHGGFMKALGLQKIDGWPKELDPTKEQSFAYYM
                     IRHKLKEILEKNLNAKFIVTGHSLGGALAILFAGVLGLHEETWLLKRLEGVYTFGQPR
                     VGDERFGRYMMKIIKDHDVKYFRYVYGNDMVPRLPYDDRSLFFKHFGPSLYFNSFYHG
                     KVMEEEPNKNYFSLVWVVPKYINAFWELIRSFILPYWKGKEYKEKNFEKLYRIFGMIV
                     PGVAAHSPKDYMDITSLGTDLYTNHDENDE"
     misc_feature    25..1437
                     /gene="LOC139904402"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
     misc_feature    order(637..642,646..651,658..678)
                     /gene="LOC139904402"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     misc_feature    889..903
                     /gene="LOC139904402"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
ORIGIN      
        1 atggcaagta aagaaaagta ttgtaaagat tacttggttg ttgatgccaa acaagcaagt
       61 ctttatgata ttgcatgtat tttgatatgt tcaactaatt ctctaaacga taagttcttt
      121 tatgaagaac gatgtgaagg atccaacaaa tcaacgacaa aagaaaacct tttgcgacga
      181 tggctcatat ttaactccgt tcttgcacaa aaatttctta tttgggcaga cacaccaatg
      241 gctaaaatag ggtcttttat cgaattatgg ttgaatcttt tggcttgcaa tggaggcttt
      301 tttggactcg tgatgaatta tgtaagaggg aagatggtga ggccgtcgtc tgaaaaattt
      361 gtgtcaattg tcggagaact tgattcgagg ttggagttgg ataaaagtat tgcaaaaggc
      421 gatggacggt ataattcgtc gctatctatg atggcttcaa aattatgtta tgaaagtaag
      481 gcgtttgtta aagctgccgt agaagatcac ttgaagatgg agttcatcga ttcttacgag
      541 tttaggaatg attacaagaa tacaatcaga acacatgcaa gcatgtttca agatcaaaaa
      601 tcaaacccca acttgatagc agtagcattt agaggaaccc tcccattcaa cgccaacgat
      661 tggatgacag acttcgacat ttcatggtac gagcttaaag acatgagcaa ctcccaaacc
      721 atcggtcgga tccatggtgg gtttatgaaa gcacttggct tacaaaagat cgatggttgg
      781 ccaaaagaac tcgatccaac caaggaacag tcttttgcgt actacatgat cagacacaag
      841 ctcaaagaga ttttagaaaa gaacctgaat gcaaagttta tagttacggg ccacagttta
      901 ggaggggcgt tggcaatctt atttgcaggt gtgctcgggt tacatgaaga gacatggttg
      961 ttgaagaggt tagaaggggt gtatacattt gggcagccaa gagtagggga tgagcgcttt
     1021 gggcgataca tgatgaagat aatcaaggat catgatgtga agtactttag atatgtttat
     1081 gggaatgata tggtgcctcg attaccttat gatgaccggt ctctgttctt caagcacttt
     1141 gggccaagtc tatacttcaa tagcttctat cacggaaagg tcatggagga agaacctaac
     1201 aagaactact tctcgctagt atgggttgta cccaagtata tcaacgcgtt ttgggagcta
     1261 attcgaagtt tcatattgcc gtattggaag ggtaaagaat acaaggagaa gaatttcgaa
     1321 aagttgtata ggatatttgg aatgatagtt ccgggagtag cagctcatag tcccaaagat
     1381 tacatggata tcacttcact cgggactgat ctttatacca accatgatga aaatgatgaa
     1441 tgatgaacaa ag
//
LOCUS       XM_071886342             718 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904403), mRNA.
ACCESSION   XM_071886342
VERSION     XM_071886342.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..718
                     /gene="LOC139904403"
                     /note="uncharacterized LOC139904403; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904403"
     CDS             45..476
                     /gene="LOC139904403"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742443.1"
                     /db_xref="GeneID:139904403"
                     /translation="MSSSKTLIRAGASIMARLMNQRPVQFASQSFDIAPKLSTLPPAF
                     PSLSKFRNAVNSAQNDSGSVNRVLPEQLLYPCGLPSLEFFLPNGDDSSSSEPLLCIKR
                     TYQPSNLRRKRVHGYLARKATKGGRRVIARRIAKGRFRITA"
     misc_feature    345..470
                     /gene="LOC139904403"
                     /note="Ribosomal protein L34; Region: Ribosomal_L34;
                     pfam00468"
                     /db_xref="CDD:425699"
ORIGIN      
        1 acttgatcac cgccgaaaat agccctaatt aatttggtcg gaaaatgtcg tcctctaaaa
       61 ccctgattcg cgccggagct tcaataatgg cgcgtttaat gaatcagaga ccagtccagt
      121 ttgcttctca atcctttgat atcgctccga agctttccac cctcccgccg gcatttccat
      181 ctttatcgaa gttccgaaac gcagtcaatt cggcgcaaaa cgactccgga agcgttaata
      241 gagttttgcc ggaacaacta ttgtatcctt gcggactgcc ttcacttgaa ttcttcctcc
      301 ctaatggaga tgactcatca tcaagtgaac cattgttgtg cattaaaaga acttatcagc
      361 ctagcaacct caggcgcaag agggttcatg gatacttggc tcgtaaagca accaagggag
      421 gtaggcgagt cattgcacgg aggatagcaa agggccgttt cagaatcact gcttagtcaa
      481 acaaaccttt ttcttcttac attcaactac ttcatgttat ctctagaagt tcaatgttca
      541 gcccgtgcta agtagaggaa tgttagcatt catttaaagt ttcttgcact gtgatcttta
      601 atagcgtttt acaagcatca ttttaatatt tggatatttg gagaacacaa ggcacaaata
      661 atatcaaaat cattaattaa aaatattgtt ttgtactatg ttcctaaatc accgtcaa
//
LOCUS       XM_071886343            1802 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CBL-interacting protein
            kinase 2-like (LOC139904404), mRNA.
ACCESSION   XM_071886343
VERSION     XM_071886343.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1802
                     /gene="LOC139904404"
                     /note="CBL-interacting protein kinase 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 121 Proteins"
                     /db_xref="GeneID:139904404"
     CDS             434..1687
                     /gene="LOC139904404"
                     /codon_start=1
                     /product="CBL-interacting protein kinase 2-like"
                     /protein_id="XP_071742444.1"
                     /db_xref="GeneID:139904404"
                     /translation="MDDNGNILMEKYELGRLLGQGTFAKVYYARNITTGQSVAIKVIN
                     KDKVSKGGLINQIKREISIMKLVRHPNILQLYEVMATKTKIYFALEYAKGGELFDKVA
                     TGKLKEEVARKYFNQLINAVDFCHSRGVYHRDLKPENLLLDEDENLKVSDFGLSALSE
                     SKRQDGLLHTTCGTPAYVAPEVITRKGYDGDKADVWSCGVILFVLLAGYLPFHDSNIV
                     EMYRKIGKSEFKFPNWIQSDARRLLLRILDPNPVKRITIPKIKDSTWFKKDRICKEPS
                     LEGSSSTNQELTRPPSMNAFDIITLSPGFDLTTLFEEPRQKKEARFTIWKPASVIISK
                     LEEIGKKVKMKVSKKEAGLLKLEAKKEGRKGILSIDAEIFELTPSFHLVEVKKCNGDT
                     LEYQKVLNEGLRPGLEDIVWLQGDQ"
     misc_feature    464..1228
                     /gene="LOC139904404"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Sucrose nonfermenting 1-related protein kinase subfamily
                     3; Region: STKc_SnRK3; cd14663"
                     /db_xref="CDD:271133"
     misc_feature    order(485..499,509..511,548..550,554..556,650..652,
                     698..709,719..721,725..730,734..736,830..835,839..841,
                     845..850,854..856,884..889,896..898,947..961,965..967,
                     1055..1066)
                     /gene="LOC139904404"
                     /note="active site"
                     /db_xref="CDD:271133"
     misc_feature    order(485..496,509..511,548..550,554..556,650..652,
                     698..709,719..721,845..850,854..856,884..889)
                     /gene="LOC139904404"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271133"
     misc_feature    order(719..721,725..730,734..736,833..835,839..841,
                     845..847,896..898,947..961,965..967,1055..1066)
                     /gene="LOC139904404"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:271133"
     misc_feature    order(884..919,938..961)
                     /gene="LOC139904404"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:271133"
     misc_feature    1313..1654
                     /gene="LOC139904404"
                     /note="C-terminal regulatory domain of Calcineurin B-Like
                     (CBL)-interacting protein kinases; Region: CIPK_C;
                     cd12195"
                     /db_xref="CDD:213380"
     misc_feature    order(1313..1339,1346..1366,1379..1390,1394..1402,
                     1406..1408,1559..1561,1571..1573,1589..1591)
                     /gene="LOC139904404"
                     /note="CBL interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:213380"
     misc_feature    1394..1399
                     /gene="LOC139904404"
                     /note="putative PP2C binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:213380"
ORIGIN      
        1 gcgatatcta tttcaattac ccatctctct gtttcaattc acacaattta ttaaattctt
       61 tttctcgtat ggctctaatt ccatacacaa aacaggcttg gattcgtgtt tgatacttct
      121 gtttagttgg tcactgaatt actgcttgaa gtttgttcat cagcgcaaac atataatatc
      181 ttctgcgtta gtgtgttgcg cttctaagaa gaattaaagc tagagaatgc taaaaatgtg
      241 tcttttgtgc atttctagta ctactttttt tcatcagtgt tgaaattgag aatgcgccaa
      301 tgttgtcccc caactcgtga taaattatgg taccgaatgg tttcttactt agttttcaag
      361 gttggatggt tgcgatttag aagatcgttc tacattagta agatttaggg tttatttggt
      421 gaaattagta aatatggacg ataatgggaa cattttgatg gaaaaatatg agttggggag
      481 attactagga caaggaacat ttgctaaagt ttactatgct cgtaatataa caacgggaca
      541 aagcgtagca attaaggtaa tcaacaaaga taaggtttct aaaggcgggc ttattaacca
      601 aatcaagagg gaaatttcta ttatgaaact agtgagacac cctaacattt tacagcttta
      661 tgaagttatg gctactaaaa caaagatata tttcgcctta gaatacgcta aaggtggtga
      721 gcttttcgat aaagtagcta ccgggaaact taaagaagag gttgcgcgta aatattttaa
      781 tcagttgata aatgctgttg atttttgcca tagtagaggg gtttatcatc gagatctaaa
      841 gcctgaaaac ttgttattag acgaagatga aaatttgaaa gtttctgatt ttgggttaag
      901 tgctctgtct gaatccaaac gtcaagatgg attattgcac acgacgtgtg ggacccctgc
      961 ttatgtggcg ccggaagtta tcactaggaa aggctatgat ggagataaag ctgatgtttg
     1021 gtcttgtggg gtgattttgt ttgttttatt agcaggttat cttccctttc atgattcaaa
     1081 tatagttgaa atgtatagaa agattgggaa atcggaattt aagtttccta attggataca
     1141 atccgatgca cgtaggttgt tattaagaat tttggatccg aatcccgtaa agagaatcac
     1201 gatcccgaaa ataaaggata gtacttggtt caaaaaggac cggatttgta aagaaccgag
     1261 tttagaaggg tcatctagta ctaatcaaga attaacaagg cctccgagta tgaacgcgtt
     1321 tgacattatt acgttatctc ccggatttga tttgacaacg ttgtttgaag aacctcgaca
     1381 aaagaaagaa gcaagattta ccatatggaa gccggcttcg gttattatat ctaaattgga
     1441 agaaattggt aaaaaagtga agatgaaagt gagtaaaaaa gaagctgggt tgttgaaact
     1501 tgaggcaaag aaggagggta gaaaaggaat tttgtcaatt gacgctgaga tatttgaatt
     1561 aactccgtcg tttcatttgg tggaagtgaa gaaatgtaat ggagatacat tggaatatca
     1621 gaaggtgtta aatgaaggtt taagacctgg acttgaagat attgtttggt tgcaaggtga
     1681 tcaataagta gttatgattt taatccattt acattacttt tagatgtctg atacttgtag
     1741 tcttgtactg tagaaccttg ctttagctag aaatgttcga agtcaatctt ttgaccataa
     1801 at
//
LOCUS       XM_071886344            1879 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides hexokinase-1-like
            (LOC139904406), mRNA.
ACCESSION   XM_071886344
VERSION     XM_071886344.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1879
                     /gene="LOC139904406"
                     /note="hexokinase-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 52
                     Proteins"
                     /db_xref="GeneID:139904406"
     CDS             194..1672
                     /gene="LOC139904406"
                     /codon_start=1
                     /product="hexokinase-1-like"
                     /protein_id="XP_071742445.1"
                     /db_xref="GeneID:139904406"
                     /translation="MGKVTFGVAVVGAAAVCAATTLVLRHRVRSSNRCVKAADILKEL
                     EENCATPASKLHKVADEMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEEGVYYALDL
                     GGTNFRVLRVQLSGQSSIEYQEFEEVSIPHQLMLATPEELFDYIASELAKFVNDEDEK
                     FEIVAGRQRELGFTFSFPVMQLSINSGTLIRWTKGFSIEGMVGRDVVAELTKAMKRQG
                     VDMRVSALVNDTVGTLAGGRYEDQDVEIAVILGTGSNAAYVERAHAIPKWHGPHPKSG
                     DMVINMEWGNFKSSHLPLTEYDNTLDAESLNPGEQIFEKMISGMYLGELVRRVLYKMA
                     KEAALFGETVPPKLKTQFILRTPQMSAMHHDTSTDLMVVGNTLKDVFEIHDTPLSTRK
                     IMVEICNIFATRGARLAAAGILGILKKTGRNTIRDGEISKTTIAMDGGLYEHYTEYRH
                     CLENTLHDLVGDEVAKHVKLILSNDGSGIGAALLAASHSQYL"
     misc_feature    194..1669
                     /gene="LOC139904406"
                     /note="hexokinase; Region: PLN02914; cl42853"
                     /db_xref="CDD:456198"
ORIGIN      
        1 aattcattca acctctctca ttattttctg ctcattcaat cacccccaat cttaggtttc
       61 ctcttttcat atccatcaat cattcaatta attcattata tgttaaaatt ttattcaatc
      121 aaattacttg cattagttat agtttcaata gaataaaaat ctgttgatca ttgatcagtc
      181 atttaattaa ttaatgggaa aagtcacgtt tggagtggcg gtggtcggtg ccgcggcggt
      241 ttgtgctgcc acgacattgg tccttcgtca ccgtgtacgg agttcgaata ggtgcgtgaa
      301 agctgctgat attttgaaag agttggagga aaattgcgca acgcctgcat cgaaattgca
      361 taaggttgca gatgagatga cggttgagat gcatgctgga cttgcatctg aaggtggaag
      421 taaacttaag atgctcatta gctatgttga taatcttcct acaggcgacg aggaaggagt
      481 gtattatgct ttggatcttg gcggaacaaa ttttcgtgtt ttgcgagtgc aattgagtgg
      541 gcagtctagt attgaatacc aagagtttga agaagtgtcc atccctcatc aattgatgct
      601 tgcaactcca gaagaacttt ttgactacat tgcatccgag cttgctaaat ttgtaaatga
      661 cgaagacgaa aagtttgaga ttgttgcagg ccgacaaagg gaattagggt tcaccttctc
      721 attccccgtg atgcaattgt ctattaattc aggaactctt attcgatgga caaaaggctt
      781 ctctattgag ggaatggttg gcagagatgt ggttgcagaa ttaacaaaag caatgaaacg
      841 acaaggtgtt gatatgcgtg tttcagcatt ggtaaacgat acagttggaa cattggctgg
      901 aggtagatac gaagaccaag atgttgaaat agctgtgatc ttgggtaccg gaagtaatgc
      961 agcttatgtg gaacgagctc atgctatacc taaatggcat ggcccacacc ctaaatcagg
     1021 agatatggtc atcaacatgg aatggggtaa ctttaagtca tcacatcttc cattaaccga
     1081 gtatgataat acactggatg ctgaaagttt gaacccaggg gaacagatat ttgaaaaaat
     1141 gatttctggc atgtatcttg gagaacttgt tcgtagagtt ctatataaga tggccaaaga
     1201 agctgccctt tttggtgaaa ctgttcctcc caaactaaaa actcaattca tcttgaggac
     1261 acctcagatg tcagcaatgc atcatgacac atccactgat ctcatggtgg tagggaacac
     1321 attgaaagac gtattcgaga tacacgatac accattgtca acaagaaaga ttatggttga
     1381 gatctgtaat atattcgcca cacgaggagc ccgtcttgct gctgccggaa ttctaggcat
     1441 tctaaagaaa acgggaagaa acaccattag agatggagag atctcaaaga cgaccattgc
     1501 aatggacgga gggttatacg aacactacac tgaatacaga cactgtcttg aaaacacatt
     1561 gcatgatttg gtcggagatg aagttgcgaa acacgttaaa cttatacttt ccaacgatgg
     1621 atctggcatt ggtgctgctc ttcttgctgc ctctcactct cagtacctat gaggtctcgg
     1681 ttttttgaag atggttaatt aacaagttca ttgtcacata caatattttt gaagtcgata
     1741 catagtgatt gaaaattgtt gttaaagttt ctcttaaatt attttagtat ataggttaga
     1801 aaatggttta aattatgtta gatgtatgaa ctaaactaag cattagtttt gctactagtt
     1861 atgtgatttt tttcatatg
//
LOCUS       XM_071886345            1198 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides clavaminate synthase-like
            protein At3g21360 (LOC139904407), mRNA.
ACCESSION   XM_071886345
VERSION     XM_071886345.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1198
                     /gene="LOC139904407"
                     /note="clavaminate synthase-like protein At3g21360;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139904407"
     CDS             43..1032
                     /gene="LOC139904407"
                     /codon_start=1
                     /product="clavaminate synthase-like protein At3g21360"
                     /protein_id="XP_071742446.1"
                     /db_xref="GeneID:139904407"
                     /translation="MGEEQSLFSEVGSLQPKSDSEIVFPAVLYPSPKAMKHVQLTEAI
                     KGNKEWIDSLLYQSGVVLFRGFPVSTASDFNDVVESSGYEDFPYGAAGGGSRTKVCGR
                     VYTANESPPEQKIGFHHELSHAIETPSKLFFFCEVEPGSGGETCIVLSHVIYNKMKKK
                     HPKFVADLEEKGLTYMRVIGKEYDPSSPIGRGWKAMYMTDDKSVAQERAAKTGIKLEW
                     MGDNAKIVIGPKPCFKYDEARQRKIWFNNLAISYNGVMDKLNDDPTKQVVFGDGQMIP
                     PDEVNDLIKMLDDECVALQWQKGDVLLLDNLAVLHSRRPLLAPPRRILASFCK"
     misc_feature    97..1029
                     /gene="LOC139904407"
                     /note="Clavaminic acid synthetase (CAS) -like; CAS is a
                     trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase
                     carrying out three reactions in the biosynthesis of
                     clavulanic acid, an inhibitor of class A serine
                     beta-lactamases. In general, Fe(II)-2OG oxygenases...;
                     Region: CAS_like; cl00184"
                     /db_xref="CDD:444731"
ORIGIN      
        1 attctccata ttttatcaaa tacagagtac agagtattaa gtatgggaga agaacaaagt
       61 ctgttcagtg aagttggaag tttgcagcca aaatctgaca gcgaaatcgt gttcccggct
      121 gttttgtatc ctagcccgaa agccatgaag catgttcaat taacagaagc tataaaaggt
      181 aacaaagaat ggatagattc actcctttat caaagtggtg tagttctgtt cagaggtttt
      241 ccagtttcca ccgcctccga cttcaacgac gtcgttgaat cgtctggcta cgaagacttt
      301 ccttatggcg cggctggtgg aggatccaga actaaagttt gtggacgtgt ttacaccgct
      361 aatgaatcac cgcccgaaca gaagatcggc tttcatcacg aactatctca tgctattgaa
      421 actccatcga aattattttt cttctgtgaa gttgaacccg gaagtggagg ggaaacttgt
      481 atagttttaa gccatgtgat ctacaacaag atgaaaaaga agcatccaaa atttgtggca
      541 gatttagaag agaaaggatt gacttacatg agagtcatag gaaaagagta tgatccctca
      601 agcccaatag gccgtggctg gaaggccatg tacatgaccg atgacaaaag tgtagcccag
      661 gaaagagctg ccaagacggg aataaaacta gaatggatgg gggacaatgc taaaattgta
      721 ataggtccca aaccctgttt caaatacgat gaggcacgac aacgcaagat ctggttcaat
      781 aatcttgcaa tatcctataa tggagtaatg gataaactaa atgatgatcc aacaaaacaa
      841 gttgtttttg gtgatggtca aatgatacct ccagatgaag tgaatgactt gataaagatg
      901 ttggatgatg agtgtgtagc gttgcaatgg caaaagggcg atgttctgtt gcttgacaat
      961 ttggcggttc ttcattcgcg tagaccattg ctggccccac cacgccgcat actagcttcc
     1021 ttctgcaaat aacggcttta aagaaaggca tattatgtga tatgtataaa tatatgtttt
     1081 tgtataacga gaggttaggt tactaaacag ataaagcttg tcaaatggct agacgcctca
     1141 aaccatgtac ttttcaatgt gtttaccctt attatgctca tgtactttac tagaaaaa
//
LOCUS       XM_071886346            2306 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NADP-dependent malic enzyme,
            chloroplastic (LOC139904408), mRNA.
ACCESSION   XM_071886346
VERSION     XM_071886346.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2306
                     /gene="LOC139904408"
                     /note="NADP-dependent malic enzyme, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 66 Proteins"
                     /db_xref="GeneID:139904408"
     CDS             145..2079
                     /gene="LOC139904408"
                     /codon_start=1
                     /product="NADP-dependent malic enzyme, chloroplastic"
                     /protein_id="XP_071742447.1"
                     /db_xref="GeneID:139904408"
                     /translation="MMSLNSSSFVRNSFSGVSRTQSQSIRLPARRSMVVAMVHSSNRN
                     MDVSVDIAVKDVNAPVAVEATDSDSNKQSTVVGGGVEDVYGEDSATEEHSITPWSVSV
                     ASGYTLLRDPHHNKGLAFTLKERDAHYLRGLLPPVVVNHDLQVKKMMHNIRQYQIPLQ
                     QYQAMMDLQERNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSIFKHPQGLFISLK
                     DKGKILEILKNWPQKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPS
                     ACLPITIDVGTNNEKMLNDEFYIGLRQRRASGQEYAELMSEFMSAVKQNYGEKVLIQF
                     EDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLAGLISALKLVGGSLADHKFLFLGA
                     GEAGTGIAELIALEISKQTNVPLEETRKKVWLVDSKGLIVRSRLDSLQHFKKPWAHDH
                     EPVKEFLDAVKTIRPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECT
                     AEQAYTWSEGRAIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHD
                     DMLLAASKALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKVYELGLASRLPQP
                     ENLVAYAESCMYSPKYRNYR"
     misc_feature    361..2076
                     /gene="LOC139904408"
                     /note="NADP-dependent malic enzyme; Provisional; Region:
                     PLN03129"
                     /db_xref="CDD:215594"
ORIGIN      
        1 gacaacttca acttggcact tacaagaacc cttatacaaa tctcatccac attcattcat
       61 tcaacaacta tatatataca tacagataca gatttatcat catatacata catcttttgc
      121 cctaatttac ttacatctct agccatgatg tccttaaatt cttcatcttt tgtgaggaat
      181 tcattttctg gtgtatcgag gactcaatcg cagtcgatta ggttaccggc gaggcgaagt
      241 atggtggtcg ctatggtgca ttcaagtaat cgaaacatgg atgtttcggt ggatattgct
      301 gtcaaggatg tgaatgctcc ggttgccgtt gaagctactg attctgatag taataaacag
      361 agtacggttg ttggcggtgg tgttgaagat gtgtacggtg aagatagtgc caccgaggag
      421 cactctatta ctccttggtc tgtttctgtt gctagtggct atactttgtt gcgtgaccca
      481 caccacaaca aaggtctggc atttactctg aaagaaagag atgcccatta tttacgtggt
      541 cttcttcctc cagttgttgt caatcacgat cttcaggtaa aaaagatgat gcataatatc
      601 cgccaatatc aaatacctct gcaacagtac caagctatga tggatcttca ggagagaaat
      661 gagaggctgt tctacaagct acttatagaa aacgtagagg agcttctccc gattgtatat
      721 actccaactg ttggtgaagc ttgccaaaaa tatgggagca tttttaagca cccgcagggt
      781 ctatttatta gtttaaaaga caaagggaag attcttgaga ttttgaagaa ttggcctcag
      841 aagaaaattc aagttatagt tgtcacagat ggtgaaagaa tcttaggtct tggagatctg
      901 ggctgccagg gaatgggcat acctgtggga aaactctctc tctacacagc tcttggagga
      961 attcgtcctt cagcttgctt gccaataact attgatgtcg gcaccaacaa tgagaagatg
     1021 ttgaacgatg aattttacat tggtctaagg caaaggaggg cgtctggaca ggagtatgct
     1081 gaacttatga gtgaattcat gtctgctgtc aagcagaact atggggaaaa agtcctcatc
     1141 cagttcgaag attttgctaa ccacaacgcc tttgatttac ttgaaaaata tagaaccacc
     1201 catcttgttt ttaacgacga tatacaggga acggcatcag ttgtgcttgc agggcttata
     1261 tctgcactaa agttagttgg tggatcatta gcagaccata agtttctttt ccttggagct
     1321 ggagaggctg gtactgggat tgctgaactc atagctcttg aaatatcaaa acagaccaat
     1381 gttccattag aggagacccg caagaaggtt tggcttgtgg actcaaaggg gttgattgtt
     1441 agatcccgct tagattcact tcagcatttc aagaagcctt gggcccatga ccatgaacct
     1501 gtaaaggagt ttttggatgc tgtcaagaca atcaggccaa cggtgttgat tggatcatca
     1561 ggagcagggc aaacatttac taaggaagtt gttgaagcta tgtcatcttt taacgagaaa
     1621 cctattattc tggctctttc caacccgact tcacaatcag aatgtacagc tgagcaagct
     1681 tatacatgga gtgagggccg tgctatcttt gccagtggga gtccatttgc gcctgttgaa
     1741 tacaatggga aggtctacgt atctggccag tccaacaatg catacatctt ccctggtttt
     1801 ggtctgggct taataatctc cggtgcaatc cgtgttcatg atgacatgct tctagcagcc
     1861 tccaaggctc tggctgaaca ggttacacaa gagcatttcg acaacgggct aatttaccca
     1921 ccattcacta acatccgcaa gatttctgct catattgcag ccaaggtggc agccaaagtt
     1981 tatgaacttg gtttggcaag tcgtcttccc cagcctgaaa atcttgtagc atatgcagaa
     2041 agctgcatgt acagccccaa atatcgcaac taccgttaga ttttgtgaaa attcggctat
     2101 gaatgtgata ctaatagtaa ttgttttcaa gggtattttg gtatgttaga tgcatgttgt
     2161 accattaggc atatatgtgt gtttttgtcc ccaattgaca caagttatta aaagtgagat
     2221 ctcattgatt gattctaggt ttgttgatgc catctgttgg gtatatgaga acacaactct
     2281 tctgttaact tatcatttcc attaca
//
LOCUS       XR_011778781             319 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904410), ncRNA.
ACCESSION   XR_011778781
VERSION     XR_011778781.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..319
                     /gene="LOC139904410"
                     /note="uncharacterized LOC139904410; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904410"
     ncRNA           1..319
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904410"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904410"
ORIGIN      
        1 aaagaagaca gcgaagaaga aaactaagaa gaattcaaga tgatatacag gaaatggagt
       61 ttgataacgg gaccagctgt tatgtgtggt ggtgttgcag ccgccgctct tgccgttaat
      121 tttatcttta accaagatcc tattgctaaa ccacctgaaa ataagcaagg caagtagaac
      181 atatgccaag agtgagttca ctttctttga gaccatgcta tgtctccccc cgttacatgt
      241 tcatttcggt ttgtagtttg aaaatgtgta gccgggaaca taactctttt cttgaataaa
      301 tgatggtaag ttttccatt
//
LOCUS       XR_011778782             503 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904411), ncRNA.
ACCESSION   XR_011778782
VERSION     XR_011778782.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..503
                     /gene="LOC139904411"
                     /note="uncharacterized LOC139904411; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904411"
     ncRNA           1..503
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904411"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904411"
ORIGIN      
        1 tcgtggtttt attcttctcc ttccctttct ttgtttcaat cgatacacac acatacacat
       61 acatgaaccc tagtttccaa aattgtgaag atgatgatga aatagctagc ttgaaattgt
      121 ggtttcttcc tccctccttt ctctcttttc tgccacgaca tagccatcac caccattgaa
      181 aaacctagct ttttattgat aaagatggtg ttgaaattga aagcttaatt catgttttct
      241 tgcttctcta acaaggtggt acaaacaagg agaagacccg gtgatattag actaccgagt
      301 ttagctggtg gtcggtttag gtactgctag gattggattt gggctgaaga cgtgtttgac
      361 tcgaagtact ctgatgtgtc ttattttaaa atgaaactgt attttatata atccggtttg
      421 taataaataa cttaattacg tgttttataa ataacgtggt gtttgttaaa ttaagatttc
      481 cgctgtgaat taaaaaaaaa aat
//
LOCUS       XM_071886347            1314 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative NAC
            domain-containing protein 94 (LOC139904412), mRNA.
ACCESSION   XM_071886347
VERSION     XM_071886347.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1314
                     /gene="LOC139904412"
                     /note="putative NAC domain-containing protein 94; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904412"
     CDS             1..1314
                     /gene="LOC139904412"
                     /codon_start=1
                     /product="putative NAC domain-containing protein 94"
                     /protein_id="XP_071742448.1"
                     /db_xref="GeneID:139904412"
                     /translation="MDERSQEHLNEKIEDIMLPGFRFHPTDEELVGFYLKRKIQQRPL
                     SIELIKQLDIYKHDPWDLPKLAMTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATG
                     TDRPIYASEGCSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLTDHTPPTKRFLD
                     KTIPANDSWAICRIFKKASSTAHQKTLSHSSWVSPILPRSQDSASDHNKILTQQHCLS
                     NINDLQHSSITNFSANIINDHNNISLYKSFNMDPTPPPLTTVNNKPPQNSISSSENLD
                     YSTTYPFLFHEPNYTSSKSSNVDASSLLVNINPSSIFGDFDKMPETNLDYITNGLHHD
                     HHQQYYNGCCFSITNLPVGIQENYVKGVQDQQGPAGMTTTIKGPSEGVNTPFEDQWER
                     SSSTTGAYPFLSLPLGLQDAWKSSFLCDSSSEISTGFSASNKCYI"
     misc_feature    52..435
                     /gene="LOC139904412"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
ORIGIN      
        1 atggatgaaa gaagtcaaga acatctgaat gagaagatag aagatatcat gttaccaggt
       61 tttcggtttc atccgaccga tgaagaactc gttgggttct atcttaaaag aaagatccaa
      121 caaaggccac tctctattga actcatcaag caattagaca tctataaaca tgatccctgg
      181 gatcttccaa agttggctat gactggagaa aaagaatggt acttctactg tccaagggat
      241 cgaaaatacc gtaacagtgc acgacctaac cgtgtgacag gagcaggatt ttggaaagcg
      301 acaggtacag accgaccgat ctatgcatcc gagggttgtt caaaatgtat cggtttgaag
      361 aagtcgctag tgttttataa aggaagagct gcaaagggta tcaaaaccga ctggatgatg
      421 catgagtttc ggttgccttc cctcactgat cacactccac ctaccaaacg tttccttgac
      481 aaaaccattc ctgctaatga ctcatgggca atttgtagaa tattcaagaa agcaagctca
      541 actgctcatc aaaaaactct atctcattct tcatgggtat ctccaatctt gccaagatct
      601 caagattctg cttctgatca caacaagatt cttactcaac aacattgctt atctaacatt
      661 aatgacttgc aacattcatc catcactaac ttctctgcta atattatcaa tgatcataac
      721 aacatttctc tttacaaatc ctttaatatg gacccaacac cccctccact tactactgtt
      781 aacaataaac cccctcaaaa ttccatttct agcagtgaaa accttgacta ttccacaact
      841 tacccctttt tattccacga accgaactac actagttcta aatcatcgaa tgtcgatgca
      901 tcatctttgc tagttaacat taatcctagt tccatatttg gagattttga taagatgcca
      961 gagactaatt tggattacat cacaaatggg ttgcatcatg atcatcatca acaatattac
     1021 aatggctgct gcttctcaat cactaattta ccagtgggaa tccaagaaaa ctatgtgaaa
     1081 ggtgttcaag atcaacaagg gccagctggc atgacgacga cgataaaggg tcccagtgaa
     1141 ggtgtcaaca ctcctttcga agaccaatgg gagagatcgt catctacaac tggcgcttac
     1201 cctttcctaa gtttgccatt ggggttgcaa gatgcatgga aatctagttt tctttgtgat
     1261 tcttctagtg agatatctac aggtttttca gctagtaaca agtgctatat ctaa
//
LOCUS       XM_071886348            1827 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904413), transcript variant X1, mRNA.
ACCESSION   XM_071886348
VERSION     XM_071886348.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1827
                     /gene="LOC139904413"
                     /note="uncharacterized LOC139904413; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904413"
     CDS             114..1805
                     /gene="LOC139904413"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742449.1"
                     /db_xref="GeneID:139904413"
                     /translation="MNQESSSKFSNLKKKANFSLKRSSPSRVKLETVGFKKKGFRGKL
                     SRGEITTVRRKKNSTSNIDDELYEKRNNYNAGFRVSKRVEGDDRGRGLKSNYRDRKVG
                     NKSSDFDRKSRDNNGEIRFRKDGGKGLFRGKRDDGRDEFVEGKQNVRNGSRVYEKRSS
                     DSHSKYRMFDKRKSGDDGGGSRMFIKRESMNVGGDRRKSIENGEIRMFDKRESRDENR
                     SGLLRKNGNGKFENGKHEHNLVEDREFGKKKFLKKKNFDDDSMASFDRPKRKMRLIRI
                     GYQNDTANKRFDDSLPKIVSDNTIEKKEGSDTEEKAEMSQNAQFRAIQPSPSIISFVN
                     ENLLGRRREIEFRKAGYNIELPSPLDNIPFSTSSERERIEESVFRNKLDFFAAAKVSS
                     SFPPPDLPEIAFAGRSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTINFFNLGSKLCLI
                     DLPGYGFAYAKEEVKESWEELVKDYVSTREGLKRVCLLIDTKWGMKPRDHELVDLMER
                     SKTKYQIVLTKTDLDFPVNVARRAMQIEEVRITFIYLYLSNISLFEYVVELTHVI"
     misc_feature    1260..>1676
                     /gene="LOC139904413"
                     /note="GTP-binding protein EngB required for normal cell
                     division [Cell cycle control, cell division, chromosome
                     partitioning]; Region: EngB; COG0218"
                     /db_xref="CDD:439988"
ORIGIN      
        1 cacagaagaa cattgtattc atatctgctg tgaagaaacc aaattactga acctatgtta
       61 cctcaaatta caagaaagat tcaaacttta atacactaaa gttgtagtga agaatgaatc
      121 aagaaagtag ctcaaagttt agtaatctta agaaaaaagc aaacttttca ttaaaaagat
      181 cttctccttc tagagtgaaa ttagaaacag tagggtttaa gaaaaaaggg tttaggggaa
      241 aactgagcag aggtgaaatt acaacagtta gaagaaaaaa gaatagtacc tccaatattg
      301 atgatgaatt gtatgaaaaa agaaataatt ataatgcggg ttttcgtgta agtaaaagag
      361 ttgagggtga tgatagggga aggggattaa agtcgaatta tagagatcga aaagtaggga
      421 ataaaagtag tgattttgat agaaagagta gggataataa tggggaaatt aggtttcgta
      481 aagatggtgg gaaaggttta tttagaggaa aaagggatga tggtagagac gagtttgttg
      541 aaggaaaaca aaatgtaaga aacgggtctc gtgtttatga gaaacgaagt tcggattcac
      601 attctaaata tcggatgttt gataaacgaa agagtggtga tgatggtggt gggagtagaa
      661 tgtttattaa acgggaatcg atgaatgtag gaggtgatag aagaaagagt attgaaaatg
      721 gtgagattag aatgtttgat aaacgcgaat cgagggatga aaataggagt gggttgttaa
      781 ggaagaatgg aaatgggaaa tttgagaacg gtaaacacga acataatctt gtagaggatc
      841 gtgaatttgg gaagaagaaa tttctaaaga agaagaattt tgatgatgat tcaatggcat
      901 cttttgatcg accaaagagg aagatgcggt tgatcaggat aggatatcaa aatgatactg
      961 caaacaagcg gttcgatgat agcctgccca aaattgtttc agataatacc atcgagaaaa
     1021 aggaaggttc ggatacagaa gaaaaggcgg agatgtctca aaatgcccag tttcgagcca
     1081 tacaaccaag cccctctata atatcatttg tgaatgaaaa tttattggga cgtagacgtg
     1141 aaattgagtt cagaaaggca ggatacaata ttgaacttcc gtctccttta gataatattc
     1201 cattctcgac aagctcagaa agagaacgta ttgaagaatc agttttcagg aataaacttg
     1261 atttctttgc tgctgcaaaa gtgtcttcat ctttcccacc tcctgatctt ccggaaattg
     1321 catttgcagg taggtcaaat gtggggaaat catctttact aaactcactt acaagacaat
     1381 ggggcgttgt acggacttca gacaagcccg gtctcactca gactataaat tttttcaacc
     1441 ttggatcaaa gctgtgttta atcgatttac cgggctatgg ttttgcttat gccaaagaag
     1501 aagtcaagga atcttgggaa gaacttgtga aagattacgt atccactcgt gaaggcctaa
     1561 aacgcgtgtg tcttttaatc gacacaaaat ggggtatgaa accaagggat catgaacttg
     1621 ttgatttaat ggaaaggtcg aaaaccaaat accagatagt attgactaaa acagatttag
     1681 atttccctgt taatgtagcc aggcgtgcta tgcaaattga ggaggtacgt attacattta
     1741 tttatcttta tctatcaaat atttctcttt ttgagtatgt tgttgagcta acacatgtga
     1801 tttgaccata cgattatatt atacagc
//
LOCUS       XM_071886350            1819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904413), transcript variant X2, mRNA.
ACCESSION   XM_071886350
VERSION     XM_071886350.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1819
                     /gene="LOC139904413"
                     /note="uncharacterized LOC139904413; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904413"
     CDS             106..1797
                     /gene="LOC139904413"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742451.1"
                     /db_xref="GeneID:139904413"
                     /translation="MNQESSSKFSNLKKKANFSLKRSSPSRVKLETVGFKKKGFRGKL
                     SRGEITTVRRKKNSTSNIDDELYEKRNNYNAGFRVSKRVEGDDRGRGLKSNYRDRKVG
                     NKSSDFDRKSRDNNGEIRFRKDGGKGLFRGKRDDGRDEFVEGKQNVRNGSRVYEKRSS
                     DSHSKYRMFDKRKSGDDGGGSRMFIKRESMNVGGDRRKSIENGEIRMFDKRESRDENR
                     SGLLRKNGNGKFENGKHEHNLVEDREFGKKKFLKKKNFDDDSMASFDRPKRKMRLIRI
                     GYQNDTANKRFDDSLPKIVSDNTIEKKEGSDTEEKAEMSQNAQFRAIQPSPSIISFVN
                     ENLLGRRREIEFRKAGYNIELPSPLDNIPFSTSSERERIEESVFRNKLDFFAAAKVSS
                     SFPPPDLPEIAFAGRSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTINFFNLGSKLCLI
                     DLPGYGFAYAKEEVKESWEELVKDYVSTREGLKRVCLLIDTKWGMKPRDHELVDLMER
                     SKTKYQIVLTKTDLDFPVNVARRAMQIEEVRITFIYLYLSNISLFEYVVELTHVI"
     misc_feature    1252..>1668
                     /gene="LOC139904413"
                     /note="GTP-binding protein EngB required for normal cell
                     division [Cell cycle control, cell division, chromosome
                     partitioning]; Region: EngB; COG0218"
                     /db_xref="CDD:439988"
ORIGIN      
        1 agaagaacat tgtattcata tctgctgtga agaaaccaaa ttactgaacc tatgttacct
       61 caaattacaa gaaagattca aactttaata cactaaagtt gtagaatgaa tcaagaaagt
      121 agctcaaagt ttagtaatct taagaaaaaa gcaaactttt cattaaaaag atcttctcct
      181 tctagagtga aattagaaac agtagggttt aagaaaaaag ggtttagggg aaaactgagc
      241 agaggtgaaa ttacaacagt tagaagaaaa aagaatagta cctccaatat tgatgatgaa
      301 ttgtatgaaa aaagaaataa ttataatgcg ggttttcgtg taagtaaaag agttgagggt
      361 gatgataggg gaaggggatt aaagtcgaat tatagagatc gaaaagtagg gaataaaagt
      421 agtgattttg atagaaagag tagggataat aatggggaaa ttaggtttcg taaagatggt
      481 gggaaaggtt tatttagagg aaaaagggat gatggtagag acgagtttgt tgaaggaaaa
      541 caaaatgtaa gaaacgggtc tcgtgtttat gagaaacgaa gttcggattc acattctaaa
      601 tatcggatgt ttgataaacg aaagagtggt gatgatggtg gtgggagtag aatgtttatt
      661 aaacgggaat cgatgaatgt aggaggtgat agaagaaaga gtattgaaaa tggtgagatt
      721 agaatgtttg ataaacgcga atcgagggat gaaaatagga gtgggttgtt aaggaagaat
      781 ggaaatggga aatttgagaa cggtaaacac gaacataatc ttgtagagga tcgtgaattt
      841 gggaagaaga aatttctaaa gaagaagaat tttgatgatg attcaatggc atcttttgat
      901 cgaccaaaga ggaagatgcg gttgatcagg ataggatatc aaaatgatac tgcaaacaag
      961 cggttcgatg atagcctgcc caaaattgtt tcagataata ccatcgagaa aaaggaaggt
     1021 tcggatacag aagaaaaggc ggagatgtct caaaatgccc agtttcgagc catacaacca
     1081 agcccctcta taatatcatt tgtgaatgaa aatttattgg gacgtagacg tgaaattgag
     1141 ttcagaaagg caggatacaa tattgaactt ccgtctcctt tagataatat tccattctcg
     1201 acaagctcag aaagagaacg tattgaagaa tcagttttca ggaataaact tgatttcttt
     1261 gctgctgcaa aagtgtcttc atctttccca cctcctgatc ttccggaaat tgcatttgca
     1321 ggtaggtcaa atgtggggaa atcatcttta ctaaactcac ttacaagaca atggggcgtt
     1381 gtacggactt cagacaagcc cggtctcact cagactataa attttttcaa ccttggatca
     1441 aagctgtgtt taatcgattt accgggctat ggttttgctt atgccaaaga agaagtcaag
     1501 gaatcttggg aagaacttgt gaaagattac gtatccactc gtgaaggcct aaaacgcgtg
     1561 tgtcttttaa tcgacacaaa atggggtatg aaaccaaggg atcatgaact tgttgattta
     1621 atggaaaggt cgaaaaccaa ataccagata gtattgacta aaacagattt agatttccct
     1681 gttaatgtag ccaggcgtgc tatgcaaatt gaggaggtac gtattacatt tatttatctt
     1741 tatctatcaa atatttctct ttttgagtat gttgttgagc taacacatgt gatttgacca
     1801 tacgattata ttatacagc
//
LOCUS       XM_071886351            1913 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904413), transcript variant X3, mRNA.
ACCESSION   XM_071886351
VERSION     XM_071886351.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1913
                     /gene="LOC139904413"
                     /note="uncharacterized LOC139904413; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904413"
     CDS             206..1891
                     /gene="LOC139904413"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742452.1"
                     /db_xref="GeneID:139904413"
                     /translation="MNQESSSKFSNLKKKANFSLKRSSPSRVKLETVGFKKKGFRGKL
                     SRGEITTVRRKKNSTSNIDDELYEKRNNYNAGFRVSKRVEGDDRGRGLKSNYRDRKVG
                     NKSSDFDRKSRDNNGEIRFRKDGGKGLFRGKRDDGRDEFVEGKQNVRNGSRVYEKRSS
                     DSHSKYRMFDKRKSGDDGGGSRMFIKRESMNVGGDRRKSIENGEIRMFDKRESRDENR
                     SGLLRKNGNGKFENGKHEHNLVEDREFGKKKFLKKKNFDDDSMASFDRPKRKMRLIRI
                     GYQNDTANKRFDDSLPKIDNTIEKKEGSDTEEKAEMSQNAQFRAIQPSPSIISFVNEN
                     LLGRRREIEFRKAGYNIELPSPLDNIPFSTSSERERIEESVFRNKLDFFAAAKVSSSF
                     PPPDLPEIAFAGRSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTINFFNLGSKLCLIDL
                     PGYGFAYAKEEVKESWEELVKDYVSTREGLKRVCLLIDTKWGMKPRDHELVDLMERSK
                     TKYQIVLTKTDLDFPVNVARRAMQIEEVRITFIYLYLSNISLFEYVVELTHVI"
     misc_feature    1346..>1762
                     /gene="LOC139904413"
                     /note="GTP-binding protein EngB required for normal cell
                     division [Cell cycle control, cell division, chromosome
                     partitioning]; Region: EngB; COG0218"
                     /db_xref="CDD:439988"
ORIGIN      
        1 aacattgtat tcatatctgc tgtgaagaaa ccaaattact gaacctatgt tacctcaaat
       61 tacaagaaag attcaaactt taatacacta aagttgtagg tttgtcattt ttcttcgtta
      121 attttcatac ttagtgattt cagcacatcg agttccatta attgttatat tttgattatt
      181 attatttttt tgtggaaagt gaagaatgaa tcaagaaagt agctcaaagt ttagtaatct
      241 taagaaaaaa gcaaactttt cattaaaaag atcttctcct tctagagtga aattagaaac
      301 agtagggttt aagaaaaaag ggtttagggg aaaactgagc agaggtgaaa ttacaacagt
      361 tagaagaaaa aagaatagta cctccaatat tgatgatgaa ttgtatgaaa aaagaaataa
      421 ttataatgcg ggttttcgtg taagtaaaag agttgagggt gatgataggg gaaggggatt
      481 aaagtcgaat tatagagatc gaaaagtagg gaataaaagt agtgattttg atagaaagag
      541 tagggataat aatggggaaa ttaggtttcg taaagatggt gggaaaggtt tatttagagg
      601 aaaaagggat gatggtagag acgagtttgt tgaaggaaaa caaaatgtaa gaaacgggtc
      661 tcgtgtttat gagaaacgaa gttcggattc acattctaaa tatcggatgt ttgataaacg
      721 aaagagtggt gatgatggtg gtgggagtag aatgtttatt aaacgggaat cgatgaatgt
      781 aggaggtgat agaagaaaga gtattgaaaa tggtgagatt agaatgtttg ataaacgcga
      841 atcgagggat gaaaatagga gtgggttgtt aaggaagaat ggaaatggga aatttgagaa
      901 cggtaaacac gaacataatc ttgtagagga tcgtgaattt gggaagaaga aatttctaaa
      961 gaagaagaat tttgatgatg attcaatggc atcttttgat cgaccaaaga ggaagatgcg
     1021 gttgatcagg ataggatatc aaaatgatac tgcaaacaag cggttcgatg atagcctgcc
     1081 caaaattgat aataccatcg agaaaaagga aggttcggat acagaagaaa aggcggagat
     1141 gtctcaaaat gcccagtttc gagccataca accaagcccc tctataatat catttgtgaa
     1201 tgaaaattta ttgggacgta gacgtgaaat tgagttcaga aaggcaggat acaatattga
     1261 acttccgtct cctttagata atattccatt ctcgacaagc tcagaaagag aacgtattga
     1321 agaatcagtt ttcaggaata aacttgattt ctttgctgct gcaaaagtgt cttcatcttt
     1381 cccacctcct gatcttccgg aaattgcatt tgcaggtagg tcaaatgtgg ggaaatcatc
     1441 tttactaaac tcacttacaa gacaatgggg cgttgtacgg acttcagaca agcccggtct
     1501 cactcagact ataaattttt tcaaccttgg atcaaagctg tgtttaatcg atttaccggg
     1561 ctatggtttt gcttatgcca aagaagaagt caaggaatct tgggaagaac ttgtgaaaga
     1621 ttacgtatcc actcgtgaag gcctaaaacg cgtgtgtctt ttaatcgaca caaaatgggg
     1681 tatgaaacca agggatcatg aacttgttga tttaatggaa aggtcgaaaa ccaaatacca
     1741 gatagtattg actaaaacag atttagattt ccctgttaat gtagccaggc gtgctatgca
     1801 aattgaggag gtacgtatta catttattta tctttatcta tcaaatattt ctctttttga
     1861 gtatgttgtt gagctaacac atgtgatttg accatacgat tatattatac agc
//
LOCUS       XM_071886352            2070 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904413), transcript variant X4, mRNA.
ACCESSION   XM_071886352
VERSION     XM_071886352.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2070
                     /gene="LOC139904413"
                     /note="uncharacterized LOC139904413; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904413"
     CDS             206..1936
                     /gene="LOC139904413"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742453.1"
                     /db_xref="GeneID:139904413"
                     /translation="MNQESSSKFSNLKKKANFSLKRSSPSRVKLETVGFKKKGFRGKL
                     SRGEITTVRRKKNSTSNIDDELYEKRNNYNAGFRVSKRVEGDDRGRGLKSNYRDRKVG
                     NKSSDFDRKSRDNNGEIRFRKDGGKGLFRGKRDDGRDEFVEGKQNVRNGSRVYEKRSS
                     DSHSKYRMFDKRKSGDDGGGSRMFIKRESMNVGGDRRKSIENGEIRMFDKRESRDENR
                     SGLLRKNGNGKFENGKHEHNLVEDREFGKKKFLKKKNFDDDSMASFDRPKRKMRLIRI
                     GYQNDTANKRFDDSLPKIVSDNTIEKKEGSDTEEKAEMSQNAQFRAIQPSPSIISFVN
                     ENLLGRRREIEFRKAGYNIELPSPLDNIPFSTSSERERIEESVFRNKLDFFAAAKVSS
                     SFPPPDLPEIAFAGRSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTINFFNLGSKLCLI
                     DLPGYGFAYAKEEVKESWEELVKDYVSTREGLKRVCLLIDTKWGMKPRDHELVDLMER
                     SKTKYQIVLTKTDLDFPVNVARRAMQIEEHLKTKKSAVQPLMMVSSKTGAGIRSLRTV
                     LSNISRFAKL"
     misc_feature    1352..1915
                     /gene="LOC139904413"
                     /note="GTP-binding protein EngB required for normal cell
                     division [Cell cycle control, cell division, chromosome
                     partitioning]; Region: EngB; COG0218"
                     /db_xref="CDD:439988"
ORIGIN      
        1 aacattgtat tcatatctgc tgtgaagaaa ccaaattact gaacctatgt tacctcaaat
       61 tacaagaaag attcaaactt taatacacta aagttgtagg tttgtcattt ttcttcgtta
      121 attttcatac ttagtgattt cagcacatcg agttccatta attgttatat tttgattatt
      181 attatttttt tgtggaaagt gaagaatgaa tcaagaaagt agctcaaagt ttagtaatct
      241 taagaaaaaa gcaaactttt cattaaaaag atcttctcct tctagagtga aattagaaac
      301 agtagggttt aagaaaaaag ggtttagggg aaaactgagc agaggtgaaa ttacaacagt
      361 tagaagaaaa aagaatagta cctccaatat tgatgatgaa ttgtatgaaa aaagaaataa
      421 ttataatgcg ggttttcgtg taagtaaaag agttgagggt gatgataggg gaaggggatt
      481 aaagtcgaat tatagagatc gaaaagtagg gaataaaagt agtgattttg atagaaagag
      541 tagggataat aatggggaaa ttaggtttcg taaagatggt gggaaaggtt tatttagagg
      601 aaaaagggat gatggtagag acgagtttgt tgaaggaaaa caaaatgtaa gaaacgggtc
      661 tcgtgtttat gagaaacgaa gttcggattc acattctaaa tatcggatgt ttgataaacg
      721 aaagagtggt gatgatggtg gtgggagtag aatgtttatt aaacgggaat cgatgaatgt
      781 aggaggtgat agaagaaaga gtattgaaaa tggtgagatt agaatgtttg ataaacgcga
      841 atcgagggat gaaaatagga gtgggttgtt aaggaagaat ggaaatggga aatttgagaa
      901 cggtaaacac gaacataatc ttgtagagga tcgtgaattt gggaagaaga aatttctaaa
      961 gaagaagaat tttgatgatg attcaatggc atcttttgat cgaccaaaga ggaagatgcg
     1021 gttgatcagg ataggatatc aaaatgatac tgcaaacaag cggttcgatg atagcctgcc
     1081 caaaattgtt tcagataata ccatcgagaa aaaggaaggt tcggatacag aagaaaaggc
     1141 ggagatgtct caaaatgccc agtttcgagc catacaacca agcccctcta taatatcatt
     1201 tgtgaatgaa aatttattgg gacgtagacg tgaaattgag ttcagaaagg caggatacaa
     1261 tattgaactt ccgtctcctt tagataatat tccattctcg acaagctcag aaagagaacg
     1321 tattgaagaa tcagttttca ggaataaact tgatttcttt gctgctgcaa aagtgtcttc
     1381 atctttccca cctcctgatc ttccggaaat tgcatttgca ggtaggtcaa atgtggggaa
     1441 atcatcttta ctaaactcac ttacaagaca atggggcgtt gtacggactt cagacaagcc
     1501 cggtctcact cagactataa attttttcaa ccttggatca aagctgtgtt taatcgattt
     1561 accgggctat ggttttgctt atgccaaaga agaagtcaag gaatcttggg aagaacttgt
     1621 gaaagattac gtatccactc gtgaaggcct aaaacgcgtg tgtcttttaa tcgacacaaa
     1681 atggggtatg aaaccaaggg atcatgaact tgttgattta atggaaaggt cgaaaaccaa
     1741 ataccagata gtattgacta aaacagattt agatttccct gttaatgtag ccaggcgtgc
     1801 tatgcaaatt gaggagcatc ttaaaacgaa gaaatctgct gttcaaccct tgatgatggt
     1861 tagttcaaaa actggagctg ggattagaag tttaagaaca gtgctctcca acatatctcg
     1921 atttgcaaaa ctctagatat ttatctatca gatgcatttg tttaaaccac actgattcag
     1981 tatgttcaat agtattgact tttaaggtca aaatcgttaa atttaataaa attatttggt
     2041 agttgcatca taggtcatat acaatattaa
//
LOCUS       XM_071886353            1700 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CBL-interacting
            serine/threonine-protein kinase 11-like (LOC139904414), mRNA.
ACCESSION   XM_071886353
VERSION     XM_071886353.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1700
                     /gene="LOC139904414"
                     /note="CBL-interacting serine/threonine-protein kinase
                     11-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 88 Proteins"
                     /db_xref="GeneID:139904414"
     CDS             186..1463
                     /gene="LOC139904414"
                     /codon_start=1
                     /product="CBL-interacting serine/threonine-protein kinase
                     11-like"
                     /protein_id="XP_071742454.1"
                     /db_xref="GeneID:139904414"
                     /translation="MSEIASSSMAVSPSNSLFNKYEVGKLLGCGAFAKVYHARDIQTG
                     QSVAIKVINKHKISHNAHLVSNVKREIDIMRQLHHPYIVKLYEVLATKTKIYFVLEFV
                     KGGELFAKVSKGKLSETTSRKYFQQLISAISYCHSRGVYHRDLKPENLLIDENGDLKV
                     SDFGLSAVTGQIRVDGLLHTLCGTPAYVAPEILTKRGYDGAKADIWSCGIILFVMNAA
                     FLPFNDSNLMMMYKKIYKGEYKCPKWMSGELKRLLSRLLDTNPETRITSNEIFNDPWF
                     RKGYKEITLEEEVFDSTAKRECKSTTLNAFDIISFSSGLNLSPLFDGSSSGIGERLVV
                     KKSPENVIEIVEEIAKVANVRVMKRKEFGVDLVGGQNGKCVIGIEVFRLTDNLVVVEV
                     QSSGGGKEFYDELWNNKIRSELNERRDTDTTES"
     misc_feature    243..1010
                     /gene="LOC139904414"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(264..275,282..284,288..290,327..329,333..335,
                     432..434,480..491,615..617,627..632,636..638,666..671)
                     /gene="LOC139904414"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271133"
     misc_feature    1095..1430
                     /gene="LOC139904414"
                     /note="C-terminal regulatory domain of Calcineurin B-Like
                     (CBL)-interacting protein kinases; Region: CIPK_C;
                     cd12195"
                     /db_xref="CDD:213380"
     misc_feature    order(1095..1121,1128..1148,1161..1172,1176..1184,
                     1188..1190,1332..1334,1344..1346,1362..1364)
                     /gene="LOC139904414"
                     /note="CBL interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:213380"
     misc_feature    1176..1181
                     /gene="LOC139904414"
                     /note="putative PP2C binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:213380"
ORIGIN      
        1 ccaaaagtgt caaatttgtc tgcccaaaac acaagaaaaa aactaaaaca aacattcaaa
       61 tcaaaaacaa caaaaaaaac cccaaaatct tctccgatct tattcaacct caatcttcaa
      121 tctccatctc ttcaattaaa ccatccccac ctttattaat acgatctcag acatcgttaa
      181 attcgatgtc cgagatcgca tcttctagca tggcggtttc gccatctaat tcattattca
      241 acaaatatga agtcggaaaa cttttaggct gtggcgcatt cgctaaagtt taccacgctc
      301 gcgacatcca aaccggccaa agcgtcgcta tcaaagtcat caacaaacat aaaatatcgc
      361 ataacgcaca tcttgtttca aatgtgaaac gagaaattga cattatgcga caattacacc
      421 atccgtatat cgttaaatta tacgaagttt tagctacgaa gacgaaaata tatttcgttt
      481 tggagtttgt taaaggtggt gagttatttg ccaaagtttc aaaaggtaaa ttatcagaaa
      541 caacgagtcg aaaatatttt caacaattga tatcggcgat aagttattgc cattcgcgcg
      601 gtgtttatca tcgagattta aaaccggaga atttgttgat tgatgaaaat ggtgatttga
      661 aagtttcgga ttttggattg agcgcggtga caggtcagat tcgggtagat ggattgttgc
      721 acacgttatg tgggacccct gcttacgtgg caccggagat attgacgaaa cgaggttatg
      781 atggtgcgaa agcggatatt tggtcttgtg ggattatatt atttgttatg aatgctgctt
      841 ttttgccgtt taatgattcg aatttaatga tgatgtataa gaagatttat aagggcgaat
      901 ataagtgtcc taagtggatg tcgggtgagt tgaagagatt gttgtctcgt cttctggata
      961 cgaatccaga gaccaggatt acgtcgaatg aaatttttaa tgatccgtgg tttagaaaag
     1021 gttataagga aataacgtta gaagaagaag tgtttgatag tacggcgaaa cgtgaatgca
     1081 agtcaacaac gttgaatgcg tttgatataa tttcgttttc gtccggtttg aacttgtcac
     1141 ctttgttcga tggtagttcg tcgggaatag gggagcggtt ggtggtgaag aagtcgccgg
     1201 agaatgtgat cgagatagtt gaggagatag cgaaggtagc gaatgttagg gttatgaaaa
     1261 ggaaggaatt tggtgtggat ttggtaggag ggcaaaatgg taaatgtgtc attggaattg
     1321 aggttttccg gttgacggat aatttagtgg tggtggaggt tcaaagcagc ggtggaggta
     1381 aagaattcta tgacgagttg tggaataata aaattagatc ggagttgaat gaacgacgag
     1441 acacggacac aacggagagt tagtgtactc gccatgaggc aaggatctgt tttatgtagt
     1501 taaatcgtat tgtggttttg attaccttgt tttttcagag agttgtgaaa attgagtgaa
     1561 aaaacagagt gggtaaagta tggttttgta cataacatgt aacttgcccc ataaatcatt
     1621 ggggtaaatt taagttttgg ttttgtgttg taaaataatg acaagtttga ttttatttat
     1681 gttgtttgat tgagatgata
//
LOCUS       XR_011778783            1150 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904415), transcript variant X1, ncRNA.
ACCESSION   XR_011778783
VERSION     XR_011778783.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1150
                     /gene="LOC139904415"
                     /note="uncharacterized LOC139904415; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904415"
     ncRNA           1..1150
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904415"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904415"
ORIGIN      
        1 tgcatcattc acgacactca gaaaaaagaa aaccctaact tcttctccta aatcatctac
       61 aattatctaa tactctctaa tacaatcggt tcaagatcat catctgtaca tataatacta
      121 cgttttttaa tcaacgatta gtggattgaa tcgattaccg atagttcatc gccgtctctg
      181 tcaatcattg ataagctccg gtcggtttgc ccttctatgg ataagcagaa gtttcagaag
      241 aaacatgcaa tggacaagta tgtatcttac cgaatgacga atttggtggt agctgcaaca
      301 cttaaaactg attatgtttt gtgtagctac ttgtattatg cttgaaaata tattacgaca
      361 acgtatactc aattagggaa aaagcagttt taatggtgtc tcgtggttgc aagggcgtta
      421 tactcattgc caattgaacc aattcgcttt aaggaatcat acacaaatgg atttttgaaa
      481 gaaatttcag atgcaataca aagcacggga agaaccatac atactaaaca tatctacgaa
      541 cagaacaaaa cagattgcaa accctagctt caatcaattg cttctccaga cgcaagcttc
      601 acaaatcaat cccaaaaatc acagtcttga tcttcaaaga aatcacgcat caaatatcgt
      661 ttcttccgat catcccccgg taatgtttcc ggaaactcta aaggtaatcc ttttgtggtt
      721 cttggtgcaa ctgtggaaac tatactcatg cttggagctt tacatgttag acgtatgtat
      781 aatgacaaaa taattgaaga gtctagacaa aatggaattg aactcgagct ccaaccagat
      841 gtcaaagtat tgaatttatg ttatttttga actgtgtaat aaattaataa ttgctattga
      901 ttaatattgt ggctctgagt tacattgttt gtcaaccgta ggctaaattt cagaatatat
      961 tacctttgcg ttccatttca aggtattgag gatctttgtc cagcacggtt agtgaggatt
     1021 ttgttatttt attataaatg ttggataatc attaagaggc ctatttttaa attgttagtt
     1081 catttaaatt aataatccta tcatttgcgt cgtgcgttca tttaccctat gtttttttat
     1141 ctcaaaaatt
//
LOCUS       XR_011778784            1177 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904415), transcript variant X2, ncRNA.
ACCESSION   XR_011778784
VERSION     XR_011778784.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1177
                     /gene="LOC139904415"
                     /note="uncharacterized LOC139904415; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904415"
     ncRNA           1..1177
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904415"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904415"
ORIGIN      
        1 tgcatcattc acgacactca gaaaaaagaa aaccctaact tcttctccta aatcatctac
       61 aattatctaa tactctctaa tacaatcggt tcaagatcat catctgtaca tataatacta
      121 cgttttttaa tcaacgatta gtggattgaa tcgattaccg atagttcatc gccgtctctg
      181 tcaatcattg ataagctccg gtcggtttgc ccttctatgg ataagcaggg tgacattact
      241 catcgaatcg tgtagaagtt tcagaagaaa catgcaatgg acaagtatgt atcttaccga
      301 atgacgaatt tggtggtagc tgcaacactt aaaactgatt atgttttgtg tagctacttg
      361 tattatgctt gaaaatatat tacgacaacg tatactcaat tagggaaaaa gcagttttaa
      421 tggtgtctcg tggttgcaag ggcgttatac tcattgccaa ttgaaccaat tcgctttaag
      481 gaatcataca caaatggatt tttgaaagaa atttcagatg caatacaaag cacgggaaga
      541 accatacata ctaaacatat ctacgaacag aacaaaacag attgcaaacc ctagcttcaa
      601 tcaattgctt ctccagacgc aagcttcaca aatcaatccc aaaaatcaca gtcttgatct
      661 tcaaagaaat cacgcatcaa atatcgtttc ttccgatcat cccccggtaa tgtttccgga
      721 aactctaaag gtaatccttt tgtggttctt ggtgcaactg tggaaactat actcatgctt
      781 ggagctttac atgttagacg tatgtataat gacaaaataa ttgaagagtc tagacaaaat
      841 ggaattgaac tcgagctcca accagatgtc aaagtattga atttatgtta tttttgaact
      901 gtgtaataaa ttaataattg ctattgatta atattgtggc tctgagttac attgtttgtc
      961 aaccgtaggc taaatttcag aatatattac ctttgcgttc catttcaagg tattgaggat
     1021 ctttgtccag cacggttagt gaggattttg ttattttatt ataaatgttg gataatcatt
     1081 aagaggccta tttttaaatt gttagttcat ttaaattaat aatcctatca tttgcgtcgt
     1141 gcgttcattt accctatgtt tttttatctc aaaaatt
//
LOCUS       XR_011778785            1055 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904415), transcript variant X3, ncRNA.
ACCESSION   XR_011778785
VERSION     XR_011778785.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1055
                     /gene="LOC139904415"
                     /note="uncharacterized LOC139904415; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904415"
     ncRNA           1..1055
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904415"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904415"
ORIGIN      
        1 tgcatcattc acgacactca gaaaaaagaa aaccctaact tcttctccta aatcatctac
       61 aattatctaa tactctctaa tacaatcggt tcaagatcat catctgtaca tataatacta
      121 cgttttttaa tcaacgatta gtggattgaa tcgattaccg atagttcatc gccgtctctg
      181 tcaatcattg ataagctccg gtcggtttgc ccttctatgg ataagcagaa gtttcagaag
      241 aaacatgcaa tggacaagta tgtatcttac cgaatgacga atttggtggt agctgcaaca
      301 cttaaaactg attatgtttt gtgtagctac ttgtattatg cttgaaaata tattacgaca
      361 acgtatactc aattagggaa aaagcagttt taatggtgtc tcgtggttgc aagggcgtta
      421 tactcattgc caattgaacc aattcgcttt aaggaatcat acacaaatgg atttttgaaa
      481 gaaatttcag atgcaataca aagcacggga agaaccatac atactaaaca tatctacgaa
      541 cagaacaaaa cagattgcaa accctagctt caatcaattg cttctccaga cgcaagcttc
      601 acaaatcaat cccaaaaatc acagtcttga tcttcaaaga aatcacgcat caaatatcgt
      661 ttcttccgat catcccccgg taatgtttcc ggaaactcta aaggtaatcc ttttgtggtt
      721 cttggtgcaa ctgtggaaac tatactcatg cttggagctt tacatgttag acgtatgtat
      781 aatgacaaaa taattgaaga gtctagacaa aatggaattg aactcgagct ccaaccagat
      841 gtcaaagcta aatttcagaa tatattacct ttgcgttcca tttcaaggta ttgaggatct
      901 ttgtccagca cggttagtga ggattttgtt attttattat aaatgttgga taatcattaa
      961 gaggcctatt tttaaattgt tagttcattt aaattaataa tcctatcatt tgcgtcgtgc
     1021 gttcatttac cctatgtttt tttatctcaa aaatt
//
LOCUS       XR_011778786             965 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904415), transcript variant X4, ncRNA.
ACCESSION   XR_011778786
VERSION     XR_011778786.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..965
                     /gene="LOC139904415"
                     /note="uncharacterized LOC139904415; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904415"
     ncRNA           1..965
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904415"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904415"
ORIGIN      
        1 tgcatcattc acgacactca gaaaaaagaa aaccctaact tcttctccta aatcatctac
       61 aattatctaa tactctctaa tacaatcggt tcaagatcat catctgtaca tataatacta
      121 cgttttttaa tcaacgatta gtggattgaa tcgattaccg atagttcatc gccgtctctg
      181 tcaatcattg ataagctccg gtcggtttgc ccttctatgg ataagcaggg cgttatactc
      241 attgccaatt gaaccaattc gctttaagga atcatacaca aatggatttt tgaaagaaat
      301 ttcagatgca atacaaagca cgggaagaac catacatact aaacatatct acgaacagaa
      361 caaaacagat tgcaaaccct agcttcaatc aattgcttct ccagacgcaa gcttcacaaa
      421 tcaatcccaa aaatcacagt cttgatcttc aaagaaatca cgcatcaaat atcgtttctt
      481 ccgatcatcc cccggtaatg tttccggaaa ctctaaaggt aatccttttg tggttcttgg
      541 tgcaactgtg gaaactatac tcatgcttgg agctttacat gttagacgta tgtataatga
      601 caaaataatt gaagagtcta gacaaaatgg aattgaactc gagctccaac cagatgtcaa
      661 agtattgaat ttatgttatt tttgaactgt gtaataaatt aataattgct attgattaat
      721 attgtggctc tgagttacat tgtttgtcaa ccgtaggcta aatttcagaa tatattacct
      781 ttgcgttcca tttcaaggta ttgaggatct ttgtccagca cggttagtga ggattttgtt
      841 attttattat aaatgttgga taatcattaa gaggcctatt tttaaattgt tagttcattt
      901 aaattaataa tcctatcatt tgcgtcgtgc gttcatttac cctatgtttt tttatctcaa
      961 aaatt
//
LOCUS       XM_071886354             617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904416), mRNA.
ACCESSION   XM_071886354
VERSION     XM_071886354.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..617
                     /gene="LOC139904416"
                     /note="uncharacterized LOC139904416; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904416"
     CDS             24..599
                     /gene="LOC139904416"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742455.1"
                     /db_xref="GeneID:139904416"
                     /translation="MAACGSLQHIFDNPLDPPPPLSSCKHISPPKPLDNSPTDVFSGF
                     NLNDRTDSMLSSPDHNSECLSEALGFESFDDVEEDFNSQWERQRHEHTIKNAKGGVWG
                     EPKRSRISGKEIPPPISTIGRRVCFKSYRYNGRLVLKEEKIPTQEILHAFREDGRLKL
                     QFVRFNDEVDRGRKNDNGDNTEENEIRKESP"
     misc_feature    366..509
                     /gene="LOC139904416"
                     /note="Fantastic Four meristem regulator; Region: FAF;
                     pfam11250"
                     /db_xref="CDD:463248"
ORIGIN      
        1 caacaacata tacaccagaa aatatggctg cctgtggaag ccttcaacac atctttgata
       61 atccattaga ccccccacca cccctatctt catgtaaaca catttcaccc ccgaaaccgc
      121 tcgataattc acccaccgat gtgttttccg gattcaacct taacgaccga acggactcaa
      181 tgctatcatc cccggatcat aattctgaat gtttatcaga agcgctcggg tttgaaagct
      241 ttgatgatgt agaagaagac tttaatagtc aatgggaacg acaacgacat gaacatacga
      301 taaagaatgc aaaaggtggt gtttggggtg aaccaaaaag gtctaggatt agtgggaaag
      361 aaatcccgcc tccgatatct actattggaa gacgggtgtg ttttaaatct tatcggtata
      421 atgggagact cgttcttaaa gaagaaaaga tcccgacaca agaaatcttg cacgcgttta
      481 gagaagacgg gcgattgaag ctgcagtttg ttaggtttaa cgatgaagtg gaccgggggc
      541 gaaaaaatga taatggtgat aatacagagg aaaatgagat taggaaagag tcaccatgaa
      601 agtttccaat ttgtaaa
//
LOCUS       XR_011778787             438 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904417), ncRNA.
ACCESSION   XR_011778787
VERSION     XR_011778787.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..438
                     /gene="LOC139904417"
                     /note="uncharacterized LOC139904417; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904417"
     ncRNA           1..438
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904417"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904417"
ORIGIN      
        1 tagtggagtt tgggcttcct gattcagggc aaattccaat cgatgatcag gatgttcaga
       61 tcgttagttc atgtacttta actaatgaaa tagactctgt gcggctgctt tattctgcta
      121 atcaagaggg cagttgtggt tgatcaggga cttgaggctg atgtctaagg tgacatttta
      181 agatacattg aagaattaat tagtagcggg atttgacaac gtgtaatgtc tcttataaag
      241 aaataaaggg agtcatttct tcacccaaga gttgagaaaa gacagccctt tacctgaagg
      301 aactcaatcg agaagaacca gctggttttg gtgggcccag ctctgaacat tatattcttg
      361 actcgaggcc ccaaggatgt gaaagatata tttgccactt taaaagatag tgcaggggac
      421 atctctggca gtactgac
//
LOCUS       XR_011778788             483 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904418), ncRNA.
ACCESSION   XR_011778788
VERSION     XR_011778788.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..483
                     /gene="LOC139904418"
                     /note="uncharacterized LOC139904418; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904418"
     ncRNA           1..483
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904418"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904418"
ORIGIN      
        1 tgctattaat acaatgatta ctcactgccg ttacattcac attatagctc cttcttccat
       61 ttatctttca cttctcaagg ggtaacatgg acaaattctc cagttgtaat gatacttcaa
      121 cccaaactaa agagtcattg aatcaagaat ccagggttca tttctcagaa gacgagaaaa
      181 ctctgatcac aaggatgcat aatcttgtag gagaaagatg gtctttgatt gctggaagga
      241 tacctggaag atctgcagag gaaattcaga aatattggac ttctaactat tcaactaata
      301 actgatcatg gatccatcac atatatatgt gtgtggtgtt tacaactgta aaattgttgc
      361 tattttcatt ctacttattt ttattattag tggctagcta tcctaataaa catggcatct
      421 atatttttga ttgtatctat ctatgttgtc tagtattatt atccgaataa aactacatat
      481 caa
//
LOCUS       XM_071886355             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904419), mRNA.
ACCESSION   XM_071886355
VERSION     XM_071886355.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139904419"
                     /note="uncharacterized LOC139904419; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904419"
     CDS             28..579
                     /gene="LOC139904419"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742456.1"
                     /db_xref="GeneID:139904419"
                     /translation="MYLIGLGDGSDDLYPSWAECDKILIPVHFSDPEHFILLTLNLDE
                     QRVLVYDSLKGCLKKGQLEAVFKNLSDNLPLYLKAIDYFNKKQDSQIVDYYENREDVE
                     LMIEDAPYVPMQSGGHGDCGVWVCLHMERIVFGWDQIDNIGDPKKAAKDYRIRMARTF
                     FRARFDTQEPPPPEDPEDPKVVN"
     misc_feature    <79..501
                     /gene="LOC139904419"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 atcattaaat tcaatccccc agattatatg tatttgattg gtcttgggga tggtagtgat
       61 gacctttatc catcctgggc tgaatgtgat aagattttga ttccagtaca tttttcagat
      121 cctgaacatt ttatactact cactttgaac ttagatgaac agagagtatt agtctatgat
      181 agtttaaagg gttgtttgaa aaaaggtcaa ctcgaggctg tcttcaaaaa cttatcagac
      241 aacttgccgt tatatttgaa ggctattgat tactttaaca agaagcagga ctcacaaatt
      301 gttgactatt atgagaacag agaagatgta gagttgatga tcgaggatgc accgtatgtg
      361 ccaatgcaga gtggtggcca tggtgattgt ggtgtttggg tctgccttca tatggagagg
      421 atagtttttg gttgggatca gattgacaac attggagacc ctaaaaaggc tgctaaggac
      481 tatagaattc gaatggcaag aacattcttc cgtgcacgct ttgatacaca ggaaccacca
      541 ccaccagagg acccagagga cccaaaggtt gttaattagt taacttgtag atgtaattat
      601 tatacagttt ttaggtaaaa catgtaattt ttgtatgtaa ataat
//
LOCUS       XM_071886356             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides synaptotagmin-1-like
            (LOC139904420), mRNA.
ACCESSION   XM_071886356
VERSION     XM_071886356.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139904420"
                     /note="synaptotagmin-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904420"
     CDS             61..639
                     /gene="LOC139904420"
                     /codon_start=1
                     /product="synaptotagmin-1-like"
                     /protein_id="XP_071742457.1"
                     /db_xref="GeneID:139904420"
                     /translation="MMGGNFLSLTNFSSEHPNHHDLLIFGKSYKKIMGNIVIEMAYKP
                     YAVDLIPTQIEFKPAKQKDLVREGGMLVVIIHEARSLQGKNYINPRVLAIFGGKSRKT
                     QTMMNNRDPIWEEVFTFMLQQPPTNETLHMKVINTPRMRLIRRKEFIALIDISLVDVV
                     NNKRIIHTYSFQKGMSQLDVELQWRTYDQLIN"
     misc_feature    268..>468
                     /gene="LOC139904420"
                     /note="C2 domain; Region: C2; cl14603"
                     /db_xref="CDD:472691"
ORIGIN      
        1 tattcttaaa agttataggg gtgaatattc atgtttgttt tataggtaaa gaagcatgac
       61 atgatgggag ggaattttct gtcactgaca aattttagtt ctgaacatcc taaccatcat
      121 gatcttctta tctttggtaa gagttacaaa aaaatcatgg gaaatatcgt tattgagatg
      181 gcgtacaaac cttatgcggt tgatctaatc ccgactcaaa tagaatttaa acctgcaaag
      241 caaaaagatc ttgttcgtga aggaggaatg cttgtcgtta ttatccacga ggctagatct
      301 cttcaaggaa aaaattacat aaatccacgc gtattggcca tttttggagg aaaatcaaga
      361 aaaactcaga ctatgatgaa taacagagat ccaatatggg aagaagtgtt tactttcatg
      421 ttacaacagc caccaacgaa cgaaactttg catatgaaag tcattaatac tccacggatg
      481 agactaattc gccgaaagga atttatagcg cttattgata taagccttgt ggatgtggtg
      541 aacaataaac ggatcatcca tacatacagc tttcaaaaag gaatgagtca gcttgatgtg
      601 gagttgcaat ggagaactta tgaccaatta attaattaat ggtaatcaat ttgtagaagt
      661 gatgtttttc tcaacaattc cgctattaca gagagcaaca ttcagtttgt tactagattt
      721 tcatctattt ttataagtct attcattaat
//
LOCUS       XM_071886357            1041 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904421), mRNA.
ACCESSION   XM_071886357
VERSION     XM_071886357.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1041
                     /gene="LOC139904421"
                     /note="uncharacterized LOC139904421; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904421"
     CDS             73..855
                     /gene="LOC139904421"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742458.1"
                     /db_xref="GeneID:139904421"
                     /translation="MRPEIPNSLFMLQYLKYLTLIGSARIFSQPKIKSSLNLPALTTL
                     HLENVILSNENRDDYNGLFSKCLNLKNLTLSNCTIDDHNHFISHSEFSNLTPENGLYS
                     VANVVAPHLKNLTVVDCLGCLKIYAPGLTSLKYETPCYENFYAKDLSCLEKVDFYMCP
                     SKEDGPAIIKIFQQFHNVKYLTLGLEIVELASIVEVVSNLPSPFAKLTSLKIYPRNAE
                     GEKKANIPTQVKNFLLGASPNATVTTYSRKDVKAFKYATSAQ"
     misc_feature    115..192
                     /gene="LOC139904421"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    193..276
                     /gene="LOC139904421"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    277..402
                     /gene="LOC139904421"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    403..459
                     /gene="LOC139904421"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    604..690
                     /gene="LOC139904421"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    691..789
                     /gene="LOC139904421"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
ORIGIN      
        1 tttgtccaaa cagttatcaa ttatgcattt tctcacactg tccaaaagat tactattata
       61 tggtctagca aaatgcgtcc cgaaatacct aattctcttt ttatgttaca atatctcaaa
      121 tatctcactc tgattggatc tgctagaatt tttagtcaac ctaaaatcaa atcttctttg
      181 aacctaccag cgttaacaac gttgcatctt gaaaatgtca ttcttagtaa cgaaaatcgt
      241 gacgattata atggtctttt ctccaagtgt ctaaacttga agaatcttac cttatctaac
      301 tgcaccattg acgatcataa tcatttcatt tcccattctg aattttctaa tctcacgcct
      361 gaaaacggat tgtattctgt tgctaatgtg gttgcacctc acctaaagaa tctcactgtt
      421 gtagattgtc taggttgcct taagatttat gcacccggat taacctcatt aaagtatgaa
      481 actccatgtt atgaaaactt ttatgcaaag gatttgtctt gtttggagaa agtggatttc
      541 tatatgtgtc catctaagga agatggtcct gcaattatta agatttttca acaattccac
      601 aatgtcaaat atcttacgct tggattggaa atcgtagagc ttgcatcaat tgtagaggta
      661 gtctcgaatc taccttctcc atttgctaag ttaacgagtc tcaagattta tccacgaaac
      721 gcggaaggag aaaagaaagc aaacattcct acacaagtca aaaactttct tctaggtgct
      781 tctccaaatg ccactgtcac gacatactca cgcaaggatg tgaaagcatt caagtatgcc
      841 acatcagcac aatgaaaaat ggccaaagta acaggtttaa attggaatga taaaaggtgt
      901 atgtttcgtg tacttatgaa ttcagctgat caatcatatg gttatgtgat ttgggtttta
      961 agtatgtaat atctctaagt acgatcctat gctagttcct gttgttgggt acttggattg
     1021 ttaattagta cttgtatata t
//
LOCUS       XR_011778789             841 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904422), ncRNA.
ACCESSION   XR_011778789
VERSION     XR_011778789.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..841
                     /gene="LOC139904422"
                     /note="uncharacterized LOC139904422; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904422"
     ncRNA           1..841
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904422"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904422"
ORIGIN      
        1 agttggttgg cctccagtta gatttttacg cagctagatt ggtgttgcaa aaaaaaaaaa
       61 attcataaat tttgcattat aagttttttt gggagtaagt gcgtaacttt attgctcact
      121 tatgctttct tatttactat tgttgtggca tttttaaggc atacaactca agtagttgag
      181 gacctgtaaa tggtaaccca catttttaaa cttttgatgg ccatttcgaa tgggtattgt
      241 tacatttgaa tgtaagggtt tttatctttt ttgttgattt tgaggtttaa tggaacaaga
      301 ttgtgattta taggggtaaa agcttctgtg gaaagctaga tgtcttgtga aagaagaacc
      361 atatgaaatt catctagaca cacttggctg ttctggtggg cctaaagcga ggttaagagt
      421 tctaaataac atactatttt ggatatagtg aagattatgc aggagatatg tggcaacaat
      481 gtgctcaaag taagcatgat tagtttttat gagaggtcat gaaaaggtgt ttgatgaaat
      541 gtccgagacg cttaattatt attctcacct ataaggcgat aagcggattt gaactgaaaa
      601 tggggattag cgtgcaacta gacacacaat tgggttcatt ttggattctt caagtgaaaa
      661 tggggataag caggtttcct acttgatcat tgtatgattt ttttagtctt caactgttaa
      721 acacataatt gggttcattt tggtttctaa agtgttagtg gtttttgtgg ttatctcaac
      781 atattactca acaatcttag tataggtact tatttgactc attatattag agatatgtag
      841 a
//
LOCUS       XM_071886358             849 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SUMO-conjugating enzyme UBC9
            (LOC139904423), transcript variant X1, mRNA.
ACCESSION   XM_071886358
VERSION     XM_071886358.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..849
                     /gene="LOC139904423"
                     /note="SUMO-conjugating enzyme UBC9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 80
                     Proteins"
                     /db_xref="GeneID:139904423"
     CDS             160..606
                     /gene="LOC139904423"
                     /codon_start=1
                     /product="SUMO-conjugating enzyme UBC9"
                     /protein_id="XP_071742459.1"
                     /db_xref="GeneID:139904423"
                     /translation="MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSP
                     YSGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
                     LLSICSLLTDPNPDDPLVPEIAHMYKTDKSKYEATARSWTQKYAMG"
     misc_feature    166..594
                     /gene="LOC139904423"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 D1-D3 and
                     related proteins; Region: UBCc_UBE2D; cd23792"
                     /db_xref="CDD:467412"
     polyA_site      849
                     /gene="LOC139904423"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctttcccttc ttccatacga ttggctcata aatctgcttt catttaattt ctatttctat
       61 ccaaaattca actttttttt aacttttatt ttacatctca tccatcaggg tttgtttatg
      121 ttgtaagagg tgaattaggg tttcgaactt gttgtcgtga tggcgtccaa acgtattctg
      181 aaggagctta aggatttgca gaaggatcct cctacttcat gtagcgcagg tcctgttgcc
      241 gaagacatgt tccattggca agcaacaatt atggggccgt ctgacagccc atattccgga
      301 ggcgtatttc tcgtttcgat tcatttccct ccggattatc cttttaagcc tcctaaggtt
      361 gcatttagga ccaaggtgtt ccacccaaac attaacagca atggtagcat ttgcttagat
      421 atcctgaagg agcagtggag cccagcttta acaatctcga aggttttgct ttccatctgc
      481 tctttgttaa ccgacccaaa ccctgatgat ccattggtgc cagaaatcgc acacatgtac
      541 aagaccgata agtccaagta cgaggccact gctcgtagtt ggacacaaaa gtacgccatg
      601 ggatgatcac aacaaacaca tccatggcat gttttaacgg ttgggtggct ttttcaatca
      661 gcatgttgtg ggtgaatgga agcacaataa taatatattg ttagtaaacc tctgtttttg
      721 ttcttcgggt gtttgtcaag aagcttggga aggcattgaa catctagtct gaatttgtgt
      781 atattttatt ttatttgaaa cgaatggaaa aattggacta atgttgaaat ctgccgtttc
      841 attcactta
//
LOCUS       XM_071886359             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SUMO-conjugating enzyme UBC9
            (LOC139904423), transcript variant X2, mRNA.
ACCESSION   XM_071886359
VERSION     XM_071886359.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139904423"
                     /note="SUMO-conjugating enzyme UBC9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 78
                     Proteins"
                     /db_xref="GeneID:139904423"
     CDS             172..618
                     /gene="LOC139904423"
                     /codon_start=1
                     /product="SUMO-conjugating enzyme UBC9"
                     /protein_id="XP_071742460.1"
                     /db_xref="GeneID:139904423"
                     /translation="MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSP
                     YSGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
                     LLSICSLLTDPNPDDPLVPEIAHMYKTDKSKYEATARSWTQKYAMG"
     misc_feature    178..606
                     /gene="LOC139904423"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 D1-D3 and
                     related proteins; Region: UBCc_UBE2D; cd23792"
                     /db_xref="CDD:467412"
     polyA_site      861
                     /gene="LOC139904423"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaactttt ttttaacttt tattttacat ctcatccatc aggtatttca tctttcaatt
       61 tacgtcaaat tttgatttct aaaattccag ttaaatttac atgtgaagaa caacaagcaa
      121 ggtttgttta tgttgtaaga ggtgaattag ggtttcgaac ttgttgtcgt gatggcgtcc
      181 aaacgtattc tgaaggagct taaggatttg cagaaggatc ctcctacttc atgtagcgca
      241 ggtcctgttg ccgaagacat gttccattgg caagcaacaa ttatggggcc gtctgacagc
      301 ccatattccg gaggcgtatt tctcgtttcg attcatttcc ctccggatta tccttttaag
      361 cctcctaagg ttgcatttag gaccaaggtg ttccacccaa acattaacag caatggtagc
      421 atttgcttag atatcctgaa ggagcagtgg agcccagctt taacaatctc gaaggttttg
      481 ctttccatct gctctttgtt aaccgaccca aaccctgatg atccattggt gccagaaatc
      541 gcacacatgt acaagaccga taagtccaag tacgaggcca ctgctcgtag ttggacacaa
      601 aagtacgcca tgggatgatc acaacaaaca catccatggc atgttttaac ggttgggtgg
      661 ctttttcaat cagcatgttg tgggtgaatg gaagcacaat aataatatat tgttagtaaa
      721 cctctgtttt tgttcttcgg gtgtttgtca agaagcttgg gaaggcattg aacatctagt
      781 ctgaatttgt gtatatttta ttttatttga aacgaatgga aaaattggac taatgttgaa
      841 atctgccgtt tcattcactt a
//
LOCUS       XM_071886360            2089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At1g71490-like (LOC139904424), mRNA.
ACCESSION   XM_071886360
VERSION     XM_071886360.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2089
                     /gene="LOC139904424"
                     /note="pentatricopeptide repeat-containing protein
                     At1g71490-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139904424"
     CDS             1..2034
                     /gene="LOC139904424"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At1g71490-like"
                     /protein_id="XP_071742461.1"
                     /db_xref="GeneID:139904424"
                     /translation="MLLSLLKSLNQSTTQNDLSKAFNIFSLILQQYSQNPSSSHYILQ
                     SLASLISCCSLLKSTSQGKQLHAYIITFGFEKSPVLVPKLVTFYSASSLLRDAYYVTL
                     NSNILHPLPWNVVISGYIRAGFRKDGLFVYQKMVKQGIVPDVFTYPSVLKACGEEFDL
                     GFGKAVHNLIVQSGLGWNLFMHNALVFMYGKCGDLKSARKLFDEMPERDCVSWNSIIS
                     GYACEGMWREAFELFDRMQDENVDANMIIWNTVVGGYLKTGDYMRVIKMISQLRTYGD
                     EWDHVAVINGLNACSHIGALKFGKEIHGLAIRTCCYAYDNVKNALITMYSRCMDVKHA
                     YIAFNLIGDKSVITWNSIISGFAHLDNVEEATYLFREMLISKVVPSYVTIASILPLCA
                     RVANLQHGKEFHCYVIKHEEFQDYLLLFNSLIDMYARSGKILLARRLFNSLTKKDEVT
                     YTSMIAGYGIQGDGRMAVDLFDEMIRSNIMPDHVTMVAVLSACSHSALVDQGQTLFNK
                     MRDEYGVVARLEHYACMVDLYGRAGLLGKAEETIRTMPYKPTPAMWATVIGGCRIHGH
                     EELGKFAGEKLLEMRPRGSGYYVLVANMYAEFGWWEKLAEVRVLMRELGVNKIPGCAW
                     LDVGDGFTEFSVADTKNVKAVEIYDMLDGLSEQLKEAGYIMSDDKYEVMESFR"
     misc_feature    142..2004
                     /gene="LOC139904424"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    334..414
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    430..624
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    628..717
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    733..816
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    955..1032
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1042..1125
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1258..1338
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1348..1431
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1447..1539
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1555..1644
                     /gene="LOC139904424"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgttacttt ctctactcaa atctctcaat caatcaacaa ctcaaaacga tttatcaaaa
       61 gcgttcaata ttttttcatt aatcttacaa caatattccc aaaatccatc gtcatcacat
      121 tacatattac aatcattagc ttcacttatt tcatgttgtt cactacttaa atcaacttca
      181 caaggaaaac aattacacgc ttatataatt actttcggtt tcgaaaaatc ccctgtttta
      241 gtcccaaaat tggtcacgtt ttactctgct tcaagtctat tacgtgatgc gtattacgtc
      301 actctaaatt caaatatatt gcatccttta ccatggaatg ttgttatttc tggttatatt
      361 agagctgggt ttcgaaaaga tggtttattc gtgtatcaaa aaatggtgaa acaggggatt
      421 gtaccggatg tatttacgta cccctctgtt cttaaagcat gcggcgaaga atttgatttg
      481 gggtttggga aggctgttca taatttaatt gtgcaatcag gtttgggatg gaatttgttc
      541 atgcataatg cattggtgtt tatgtatgga aaatgtggcg acttgaaatc tgcacgtaag
      601 ctgtttgatg aaatgcctga gagagattgt gtttcttgga attcgattat ttcagggtat
      661 gcttgcgaag gcatgtggag ggaagctttt gagctttttg atcgtatgca ggatgaaaat
      721 gtcgatgcaa atatgataat ttggaatacc gttgttggag ggtacttgaa gacaggtgac
      781 tatatgcgag tgataaagat gatttcccag ttgaggactt atggtgatga atgggatcac
      841 gtggctgtaa taaacggttt aaatgcatgt tcccatattg gtgcgttaaa atttggaaaa
      901 gagattcatg gtttggctat tcggacgtgt tgctatgctt acgataatgt gaaaaatgca
      961 ctgattacga tgtattcaag gtgtatggat gttaagcatg cttatattgc gttcaattta
     1021 attggagata aaagtgtgat tacatggaat tcaataatat caggctttgc acatttggac
     1081 aatgtagaag aagccacata tctatttagg gaaatgttga tttctaaagt agtaccaagt
     1141 tacgtgacga tagcaagcat acttccttta tgtgctcgag tagcaaatct tcaacacggt
     1201 aaagagttcc attgttacgt tataaagcac gaggaatttc aagattactt gttgctattt
     1261 aactcactta tcgacatgta tgcaagatct gggaaaatct tgttagcgag aagattgttt
     1321 aatagtttga ccaaaaaaga tgaagtcacc tacacttcaa tgatagctgg ttacgggatt
     1381 caaggagatg gacgaatggc ggttgacttg tttgacgaga tgattagatc aaacataatg
     1441 ccggatcatg tgaccatggt tgcggttttg tctgcttgta gtcattctgc tcttgttgac
     1501 caaggtcaaa ctttgtttaa caagatgcgt gatgaatatg gtgtagttgc tcgtttagag
     1561 cattatgcat gtatggttga tttatatggg agagctggtt tattaggtaa agcagaagaa
     1621 acaatcagaa caatgcctta taaaccgaca cctgcaatgt gggccacggt tattggaggg
     1681 tgtcggattc atggacacga agagttggga aaatttgcag gtgagaaact gttggaaatg
     1741 aggcctcggg gttcgggata ttatgtgttg gtggcgaata tgtatgctga atttgggtgg
     1801 tgggagaaac tagctgaagt tagggttttg atgagggaat tgggtgtgaa taagattcct
     1861 ggttgtgcat ggttagatgt aggagatggg tttactgagt tttcggttgc ggatacgaag
     1921 aacgtgaagg cagttgagat ttatgatatg ttggatggct tgagtgaaca attgaaagag
     1981 gctggttaca tcatgtctga tgacaaatat gaagttatgg aatcatttag atgaagagga
     2041 gaatgtcaga gggggtaata ttgacccatt tacttatgag ctggacaat
//
LOCUS       XM_071886361            1989 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides MLO-like protein 1
            (LOC139904425), mRNA.
ACCESSION   XM_071886361
VERSION     XM_071886361.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1989
                     /gene="LOC139904425"
                     /note="MLO-like protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139904425"
     CDS             232..1716
                     /gene="LOC139904425"
                     /codon_start=1
                     /product="MLO-like protein 1"
                     /protein_id="XP_071742462.1"
                     /db_xref="GeneID:139904425"
                     /translation="MAGGGEGEGTSLEFTPTWVVAAVCTVIVGISLAVERLLHFTGKK
                     LKKAGQKPLFEALQKIKEELMLLGFISLLLTVFQSRIIKMCVRKSLMEHLLPCSLTEM
                     NDAESPKPEATSHLRHLLAEEATATGYCAMKNKVPLLSLEALHHLHIFIFVLAVVHVT
                     FSVLTVVFGGAKIRQWRYWEESISKENFDHSQVLKPKVTQVKDHDFIKNRFLGIGKRS
                     AIRGWLHSLFKQFYGSVTKSDYVALRLGFITTHCKGNPKFNFHKYMIRALEDDFKKVV
                     GISWYLWVFVVIFLLLNIHGWHTYFWIAFVPFILLLAVGTKLEHIIIQLAHEVAEKHI
                     AIEGDLVVQPSDDHFWFKRPKIVLFFIHFILFQNAFEIAFFFWIWVQYGFDSCVMGKV
                     RYIIPRLIIGVFIQIMCSYSSLPLYALVTQMGTNFKKSIFDEHIQAKVVGWAQHAKKK
                     AHNGGANGSSHDGSNAQTAPTAAAAAFKGGIQLAKLNQNQQPQL"
     misc_feature    256..1611
                     /gene="LOC139904425"
                     /note="Mlo family; Region: Mlo; pfam03094"
                     /db_xref="CDD:460801"
ORIGIN      
        1 cttttgtgac caccatcttt actccctttt ttatctcccc ccaaaatcac cttcaaaatc
       61 aattctttca ttctgcaatt caatcaagaa tcatttttac aacaatccca ttagtaaagt
      121 tgcaatcttt atagcatttg cacattacac aactcaaaaa atgatcttaa attgaaaaag
      181 attgtttttt ttttctttgc tagacccaaa atcttgattt tttatagaaa aatggcgggt
      241 ggtggtgaag gtgaaggaac atcgttagag tttacaccaa catgggttgt cgccgccgtt
      301 tgtacggtca tcgtcggaat ctcacttgca gttgaacggc tacttcattt caccggaaag
      361 aaattaaaga aagcaggtca aaagcctctt tttgaagcct tgcaaaagat caaagaagag
      421 ttgatgctgt tggggtttat ttctctctta ctaactgttt ttcaatcaag aattatcaaa
      481 atgtgcgtga ggaagagttt aatggagcac cttttaccat gttcattgac tgaaatgaac
      541 gacgccgaaa gtcctaagcc tgaggctacg tctcatcttc gtcatttgct tgcggaagaa
      601 gcaacggcta cgggttattg tgctatgaag aataaggttc cactgttatc tcttgaggca
      661 ttgcatcatc tacacatctt tatttttgta ttggccgttg tgcacgtcac attttctgtt
      721 ctcacggttg tatttggagg tgcaaagata cgacaatgga ggtattggga agaatctatc
      781 agtaaagaaa attttgacca ttcacaagtg ttgaagccga aagtcactca agttaaagat
      841 cacgatttca ttaagaaccg tttcttgggt attggtaaac gttcggccat tcgaggctgg
      901 ctgcattctc ttttcaagca attttacgga tcagtcacca agtcagatta tgtagcattg
      961 cgtttgggat ttattacaac acattgtaag ggtaacccta agttcaattt tcacaagtac
     1021 atgatacggg ctttggaaga tgattttaag aaagtggttg gtatcagctg gtatctatgg
     1081 gtgtttgtgg tcattttctt gttactgaac attcacggtt ggcatacata tttttggatt
     1141 gcttttgtcc ctttcattct tctgcttgcc gtgggaacaa agcttgagca cataataatt
     1201 caattagctc atgaggttgc cgaaaaacat atagccatag aaggtgattt ggttgtacaa
     1261 ccgtctgatg atcatttttg gtttaaacgg cccaaaatcg tgcttttctt catacatttt
     1321 atacttttcc aaaatgcatt cgagattgct ttcttcttct ggatttgggt tcaatatggc
     1381 tttgactcgt gcgtgatggg gaaagtacgc tacatcattc ctagactcat catcggggta
     1441 ttcattcaga ttatgtgcag ttacagctct ttaccacttt acgctctcgt gacacagatg
     1501 ggaacgaatt tcaagaaatc gatatttgat gagcatattc aagctaaagt tgtgggttgg
     1561 gctcaacatg ccaagaaaaa agcacataat ggtggagcta atggctcgag ccatgatggc
     1621 tcaaatgccc aaactgcacc aactgctgca gctgctgctt tcaagggtgg tattcaactt
     1681 gctaaattga atcagaacca gcagccgcag ttgtgaagtc gcaacatgtt gcggagatgc
     1741 atatatgtta atataatatg gtagtagtaa aaaaaatagg gtcaatcaat aacctggttt
     1801 tgttgtggtg atatagtaat cgcggtttag cgaattttgc atttggctct ggaaatatgg
     1861 gtaaatgatt aaggagaagg tgtgtaaaca tataaggtat tattggtgac atttgactag
     1921 tatacctgtc aattgagacc caaatactca aattcgggtc aaatgggtca aacattcggg
     1981 tcaattggg
//
LOCUS       XM_071886362            1503 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glyceraldehyde-3-phosphate
            dehydrogenase A, chloroplastic-like (LOC139904426), mRNA.
ACCESSION   XM_071886362
VERSION     XM_071886362.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1503
                     /gene="LOC139904426"
                     /note="glyceraldehyde-3-phosphate dehydrogenase A,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 49 Proteins"
                     /db_xref="GeneID:139904426"
     CDS             117..1325
                     /gene="LOC139904426"
                     /codon_start=1
                     /product="glyceraldehyde-3-phosphate dehydrogenase A,
                     chloroplastic-like"
                     /protein_id="XP_071742463.1"
                     /db_xref="GeneID:139904426"
                     /translation="MASAAFTMANSSLQVNGKGLSEFTGLRSSSALPFGSRRCSDDLI
                     SMVAFQTSFVGTGKGTKGPVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDT
                     GGVKQASHLLKYDSTLGIFDADVKPSGDSAISVDGKIIKVVSDRNPSKLPWGEMGIDL
                     VIEGTGVFVDREGAGKHIEAGAKKVLITAPGKGDIPTYVVGVNAELYNHSENIISNAS
                     CTTNCLAPFVKVIDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTS
                     TGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFREAADN
                     ELNGILSVCDEPLVSVDFRCSDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVD
                     LADIVANNWK"
     misc_feature    132..1322
                     /gene="LOC139904426"
                     /note="glyceraldehyde-3-phosphate dehydrogenase A;
                     Provisional; Region: PLN03096"
                     /db_xref="CDD:215572"
     polyA_site      1503
                     /gene="LOC139904426"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcaaccaca accataagat tagattggat gatagatagg cttatctgaa cctcatgcac
       61 actcattcta aacactataa ccttacaaac acatctcttg caaacaaacc ataaccatgg
      121 cttctgcagc ctttactatg gccaattctt ctcttcaggt taatggtaaa ggattatccg
      181 aatttaccgg gcttcgtagc tcctctgctc ttccttttgg cagtcgaaga tgttcggacg
      241 atttaatctc catggttgcc ttccaaacct ctttcgttgg tacaggcaag ggtactaaag
      301 gacctgtaga agcaaaactg aaggtagcca tcaatggatt cggacgtatc ggaaggaact
      361 ttttgaggtg ttggcatgga aggaaagatt cccctcttga tgtcattgcc attaacgaca
      421 ccggtggtgt caaacaagcg tcccaccttc tcaaatacga ctccactctt ggcattttcg
      481 acgcagatgt taagccttca ggcgatagtg ccatttctgt tgatggcaag atcatcaaag
      541 tcgtatctga ccgtaacccc tccaaacttc cttggggtga aatggggatt gatttggtga
      601 tagaaggtac cggagtgttt gtggacagag aaggagctgg taagcatatt gaagccggag
      661 ctaaaaaggt tctcatcact gcacctggaa aaggcgatat ccctacttac gttgtcggtg
      721 tcaatgccga gttatacaac cattctgaaa acatcatcag caatgcctcc tgcaccacta
      781 actgtcttgc tccttttgtc aaagttatcg accagaaatt cggaattatc aagggaacaa
      841 tgaccactac tcactcgtac accggtgacc aacgtctatt agacgctagc caccgtgact
      901 tacgacgtgc aagagctgca gcgctcaaca tcgtgccaac atccactggt gcagcgaaag
      961 cagttgcact agtgttgccg tcacttaaag ggaagctaaa cgggatcgca cttcgtgtac
     1021 ccaccccgaa tgtatcagta gttgacttag ttgttcaagt ttcaaaaaag acatttgcag
     1081 aggaagtaaa tgctgcattt agagaagctg cagataatga gttgaacggt attttgtctg
     1141 tatgtgatga gccacttgtg tctgttgact ttagatgcag cgatgtgtcg tcaacagttg
     1201 actcttcgtt gaccatggtt atgggagacg atatggtgaa ggtaattgcg tggtacgaca
     1261 atgaatgggg ttactcgcaa agggtcgttg atttagctga cattgttgct aataactgga
     1321 aatgaagtac agaatgagct tcgtttaatc gatctacatg tttttggttt atatatatat
     1381 atttataatt attatttata atttatatat acatatatgt aatatgtaat gtaatgtgat
     1441 ttaatcaaag ttataagaat ctgtattgac tattcaaagt aaaataagat cttaatttct
     1501 tcc
//
LOCUS       XM_071886363             810 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904427), mRNA.
ACCESSION   XM_071886363
VERSION     XM_071886363.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..810
                     /gene="LOC139904427"
                     /note="uncharacterized LOC139904427; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904427"
     CDS             242..763
                     /gene="LOC139904427"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742464.1"
                     /db_xref="GeneID:139904427"
                     /translation="MMQEVIDLQNEHHETHQYMESINEKLKEAERKQKQMISFLGQVL
                     QNQTFSSSIREKKEGMLHVSSSSRATNMFIEHQPLEQNPDLEFVMTEDDHVSKGKNVL
                     EIEDDAQKSIFEASYGGTNDEILVKQEDVWSDLQNCEFSDLWDLGTNWQSDDDIRFDE
                     IDKQDDSSKKTDA"
ORIGIN      
        1 ttgtttgtaa ttttttttac atcgttgtaa tcggtttttt gagacggggt atgaaaaggg
       61 ctttcgcaag attgatgctg acaaatggga gtttgcaaat gagaggtttt taagaggaag
      121 aaagtatctt ttgaaggaca ttcaaaggcg taaatcgaat acttttctag ctaatgaaga
      181 aaagaacaat ttatcatcaa tcgaagctga aattgaacga ttacaaaaag agaaaacgga
      241 gatgatgcaa gaagttatcg acttacaaaa cgagcatcat gaaacacatc aatatatgga
      301 atcaataaat gaaaaactaa aagaggcgga acgtaaacaa aagcaaatga tctcgttttt
      361 aggtcaagtg ttacaaaatc agacgttttc gtcttcaata cgagaaaaga aagagggaat
      421 gcttcatgtt tcttcttctt cgagagcgac taacatgttc atcgaacatc agccccttga
      481 acaaaatcct gatcttgagt ttgtgatgac agaagatgac catgtttcaa aagggaaaaa
      541 tgtgttggaa attgaagatg atgcacaaaa gtcaattttc gaagcgagtt atggaggcac
      601 gaatgatgag attctcgtga aacaagagga cgtgtggagt gatcttcaga actgcgagtt
      661 ttcggattta tgggacttag gaacaaattg gcaaagtgac gatgatattc gattcgatga
      721 gatcgataaa caagatgata gttcaaagaa aacagatgca taagggattt ggaattttgt
      781 atcaagttgg tttagtataa attggtttat
//
LOCUS       XM_071886364            1518 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zeatin
            O-glucosyltransferase-like (LOC139904428), mRNA.
ACCESSION   XM_071886364
VERSION     XM_071886364.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1518
                     /gene="LOC139904428"
                     /note="zeatin O-glucosyltransferase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904428"
     CDS             1..1425
                     /gene="LOC139904428"
                     /codon_start=1
                     /product="zeatin O-glucosyltransferase-like"
                     /protein_id="XP_071742465.1"
                     /db_xref="GeneID:139904428"
                     /translation="MVTPTMNITNQNNVVIVMVPLPLQGHLNQLLHLSRLISAHNVPV
                     HIISTTTHGRQAKLRLQGWDPNTISTIFFHDYPIPTYASPSLKPNSDNKFPSHLLPIC
                     EAATNLRGPVAALLRKLGPTTHRLIIIHDSLMGSVVQDFVSIPNAESYTFHSVSAFSI
                     ALYTSKHVAEQIRKLIEPKALTQGLISFEGCFSSEFKKFITSQHEYTKLSSGRIYNTC
                     RVVEQPILELLEADARNNNKLLWALGPFNPVDIKSSSKVSRKDGGPVARCLNWLDKQS
                     SNTVIFISFGTTTTFSLEQITEIAIGLEKSYTKFIWVVREADKDVTNNKKFRVELPQG
                     FEERVKDRGVVIRVWAPQLDILGHKSIGGFMSHCGWNSCIESISMGVPIAAWPVHSDQ
                     PNNAVLVTKILKVGLLVKEWCQSEDVVGSMVVETAVRRLMGSKDGDEIRKRAMVMGRR
                     VRKSTRDGGVSRLELDSFIDHISR"
     misc_feature    order(73..78,82..84,529..531,559..564,577..579,658..660,
                     859..861,1099..1101,1105..1107,1111..1116,1123..1125)
                     /gene="LOC139904428"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(73..75,859..861,1099..1101,1105..1107,1111..1116)
                     /gene="LOC139904428"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    76..78
                     /gene="LOC139904428"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     misc_feature    <580..1419
                     /gene="LOC139904428"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 atggtaacac ctaccatgaa tattactaac caaaataacg tagtcatagt catggttcca
       61 cttccattac aaggccatct caaccaactc ctccacctct cccgccttat ctccgcccac
      121 aacgtcccag tccatatcat ctctaccacc actcacggcc gccaagccaa gctccggtta
      181 caagggtggg acccaaacac aatctccact atctttttcc atgactaccc tattccaact
      241 tatgcatcac catctcttaa acctaattcc gacaacaaat tcccttctca tcttttacct
      301 atatgtgaag ccgccactaa ccttcgcggt ccagtggcgg ctctccttcg aaaattaggt
      361 cccacgacac accggctcat tattatccat gattctctca tgggttcggt cgttcaagac
      421 tttgtttcaa tcccaaacgc cgaatcttac acttttcata gtgtatcagc attctcgatt
      481 gctttataca cctccaaaca tgttgcagaa caaattcgaa aattaatcga accaaaagcc
      541 cttacacaag gattgatatc atttgagggt tgcttttcat ccgagttcaa gaaattcatc
      601 actagtcaac atgagtacac caaacttagc tcgggtcgca tctataacac gtgtagagtg
      661 gtcgagcagc caatcttgga gttactagaa gccgatgcac gaaataataa caagctactt
      721 tgggctcttg gaccctttaa tcctgtcgat ataaaaagca gttcaaaagt ttcaagaaaa
      781 gatggtggtc cagttgcgag atgcctcaat tggcttgaca aacaatcatc aaacaccgtg
      841 atcttcattt cgttcgggac aacaacaacg ttttccctag aacaaatcac agagatcgca
      901 atcggattag aaaagagcta tacaaaattc atatgggtag ttcgtgaagc ggataaagat
      961 gtaacaaata ataaaaaatt ccgtgttgaa ttgccacaag ggtttgaaga aagagttaaa
     1021 gatcgcggtg tcgtaattag agtttgggca ccacagttag atatattggg tcataagtct
     1081 ataggtgggt tcatgagtca ttgcggatgg aactcgtgta ttgaaagtat atctatggga
     1141 gttcctatag cagcgtggcc agtacattcg gaccaaccga ataatgccgt gttggtgaca
     1201 aagattctta aagtaggatt gttggtgaaa gaatggtgcc aaagtgaaga tgtggtgggg
     1261 tcgatggtcg tggagaccgc ggtgaggaga ttgatgggtt cgaaagatgg tgatgaaatt
     1321 agaaaaagag cgatggtgat gggtcgtcgt gttagaaagt ctactagaga tggtggtgtt
     1381 agtcggctcg agctggactc atttattgat catataagcc gataaactaa ctaaagtttc
     1441 tcggtttcgg ttattgaacg agttgtgtta ttcttgaggt ttgatattct tgagttttga
     1501 tagtaaagct tgctattg
//
LOCUS       XR_011778790            1106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904429), ncRNA.
ACCESSION   XR_011778790
VERSION     XR_011778790.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1106
                     /gene="LOC139904429"
                     /note="uncharacterized LOC139904429; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904429"
     ncRNA           1..1106
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904429"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904429"
ORIGIN      
        1 ttcccttgca ttttatccct tcaaaacccc ctaatccatt catcgcgtgt ttcattcatt
       61 tgatatctgt gcaattttac ttcaacccta aaaaaaaata ctacataatt cttgatgttt
      121 ataccccaaa aatcatatgt tggccttttg tgagagtttg ttcatacact cgcgatttgc
      181 cctaacttct taacagatta gcgaagttgg cgtgtagcgc ttttcatgat gatataatgc
      241 aaaaggagat aataaaccta aaaaggaaga aactataata gaggtatttc aaccacaaca
      301 atctataatc atctcatatg tgatcatcgc tataatttat cttgatttaa ttaccagaat
      361 atgcaataaa tttaatggat agtaaaacaa ttgcactcat ctttaatgtg taataaaatt
      421 aatgtataaa taaattttat tttgatatta ttattattat tattgtttct atttctattt
      481 ctatttctat ttctatttcc attactttta aagataagaa gctccgaaag tcccacgttt
      541 ttgataacat tgttatttcg ggtttaattg gttgtattcg agatatcaca agtcctgtct
      601 aaaatggacg gtgtggttgc aacatccttt gttatctttg taattttgtt acactagctc
      661 cttgctagtt tgtgctttgt aattgtttgt tttataacaa aatttccgcc attccaaaaa
      721 aagacaataa agcggaatta aaacaagtta tgagcctaag tctcaactct gacggtctca
      781 cctatgatat cttcttgcac ctcttatcgc atctacaact gatagaaatc taacactgga
      841 caacggctaa atccgaaatc ttgtacgcga ttttggcacc agcgacgccg aactaacgcc
      901 tgtccgatgt cggccgactg taggtcagaa tcgacgccga tgtaagaact gacccgcgat
      961 actgatcgct cttatgaact actccaatat attttccaag agcacgaaac gtgacatctc
     1021 atagtctaga cgtcgtacca agatttatgc aaaatatctc cattttgtac tttcaacaaa
     1081 caaatagctc ggttcagaat aatcaa
//
LOCUS       XR_011778791             963 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904430), ncRNA.
ACCESSION   XR_011778791
VERSION     XR_011778791.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..963
                     /gene="LOC139904430"
                     /note="uncharacterized LOC139904430; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904430"
     ncRNA           1..963
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904430"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904430"
ORIGIN      
        1 tatctctctt atacttaaaa gtgcatcaat attaaatcct agccatctaa tcctttaaac
       61 tccactaatc atagccattc aattcaaatt aaaccctaaa tcacgtgatt aagccttgat
      121 tagcacctaa acagacaaaa ttacccatgt ttagcaaaaa aacatacgga agagaattca
      181 aaaattagga gtttcattat cacagttcat ttgaattcca caattctcca acctcccaag
      241 atcctctcat caatcgaacc atctcacata cacaaaaaat ctagattcaa ttaaattatg
      301 cttttatttt tcaatcagaa caaaaccggt atcattaggg cacaaattgg ggcttcaggc
      361 taaggcgatt gatatatgat aaaggattga aagatcgccc aaaattgggg cttcttcact
      421 agaaatgttt tttataaggg ttttttgatg aaattctcag atttacaaaa acagttgata
      481 agcacatatt gttacttaca aatgaagatg gtccttttag gagcattaag ggagtgacaa
      541 agcgaaccca tgactagaac aacattgcaa cgtgctaagg atgtaatggg agttgaagtt
      601 gacgaacttg ctcagttcat accattggct ggagaaagaa cctttgtggc catgttgaag
      661 ctaaatggct aagaatatct tcacatctca atcttcaagc ggatcagcct actttaagag
      721 agaactaaag tgtttgaatt catacactta tagctcagat gcaagcggga gttggagatt
      781 tggtattgca tcaatttaga ggtctggatg ctattgcatc ttatgcgaaa tgacatcttt
      841 tttttagatg gaattactga tagtgtggga acattggccc gtgtgcattt tttgaggaca
      901 tacggatgtt gcagtggtaa aacagctggt accaatgatc gtaaatatca gcaattaaaa
      961 ttt
//
LOCUS       XM_071886365            3234 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides coatomer subunit
            beta'-2-like (LOC139904431), transcript variant X1, mRNA.
ACCESSION   XM_071886365
VERSION     XM_071886365.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3234
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3234
                     /gene="LOC139904431"
                     /note="coatomer subunit beta'-2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     Proteins"
                     /db_xref="GeneID:139904431"
     CDS             305..3061
                     /gene="LOC139904431"
                     /codon_start=1
                     /product="coatomer subunit beta'-2-like isoform X1"
                     /protein_id="XP_071742466.1"
                     /db_xref="GeneID:139904431"
                     /translation="MPLRLEIKRKLAQRSERVKSVDLHPTEPWILTSLYSGTVCIWDY
                     QSQTMAKSFEVTELPVRSAKFVSRKQWVVAGADDMFIRVYNYNTMDKVKVYEAHTDYI
                     RCVAVHPTLPYILSSSDDMLIKLWDWEKSWYCTQIFEGHSHYVMQVTINPKDTNTFAS
                     ASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT
                     KTCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWA
                     IGYMKSSRRIAIGYDEGTIMVKVGREEPVASMDNSGKIIWAKHNEIQTVNIRSVGAEY
                     EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSA
                     LEIVWSSDGEYAVRESTTKIKIFNKSFQEKKSIRPTFSAERIYGGSLLAICSNDFICF
                     YDWAECRLIQRIDVGVKNIYWADGGDMVAIASDSSFHILQYNRDVVSAHLDSGRPVDE
                     DGIEESFDILSEVSEKVRTGLWVGDCFIYTNSSGRLNYCVGGEVTTMFHLDRPMYLLG
                     YLANQSRVYLIDKEFNVIGYTLLLPLIEYKTLVMRGDLERASGVLPSIPKEHHNSVAH
                     FLESRGMIEEALEVATDPDYRFELAIQLGKLEIAKDIAFVAQSESKWKQLGELAMSTG
                     LLDLAEDCLKHAKDLSGLLLLYSSLGDADEIEKLASLAKESGKNNVAFACLFMLGKLE
                     DCLQLLVDSNRIPEAALMARSYLPSKVSEIVALWRKDLNKVNQKAAESLADPEEYPNM
                     FEDWQVALEVEARAAETRGSYPPATEYVNYVDRSHVNLVEVFKHMQLDDEELHENGEL
                     DHEDVEENGNEGEFVAGQDASQEEDGVAMDNDSSDGAVLVNGNEGEEEEEEWGTNNAA
                     NPSA"
     misc_feature    353..1195
                     /gene="LOC139904431"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    362..469
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    order(398..400,410..412,428..433,467..472,524..526,
                     536..538,554..559,593..598,647..649,662..664,680..685,
                     725..727,779..781,794..796,812..817,851..856,914..916,
                     926..928,944..949,983..988,1037..1039,1052..1054,
                     1070..1075,1109..1114,1166..1168,1178..1180)
                     /gene="LOC139904431"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    611..724
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    737..850
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    869..982
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    998..1090
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1214..2641
                     /gene="LOC139904431"
                     /note="Coatomer WD Associated Region from Coatomer Subunit
                     Beta and Beta'; Region: Coatomer_WDAD_beta-like; cd22947"
                     /db_xref="CDD:438572"
     misc_feature    1214..1348
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1364..1468
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1370..1474
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1481..1594
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1484..1582
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1598..1693
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1700..1810
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1703..1864
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1874..1993
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    order(1973..1975,2063..2065,2420..2428,2507..2512,
                     2573..2578,2585..2587)
                     /gene="LOC139904431"
                     /note="coatomer beta'-subunit binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:438572"
     misc_feature    1994..2068
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
ORIGIN      
        1 acatttagtt ggattgtcaa accccaccct aattttcttt taatattttt tctcaaacca
       61 attttaccca ggtccaagta aacatacaaa acctctctat ctctacatct ggatcatgtt
      121 attgattttt gatctcgatc tcaatttcat ttaatacact caaatctttt aattcgggcg
      181 taaatacagt gtatctgtat ctacacccct ctcggtggta ttaccggatt tcacactcgg
      241 atcttagggt ttcaggattc agttacgaat ttcaaatcaa taacctaact ctcagtttgc
      301 agcaatgcct ctcagactcg agatcaagag gaaacttgct caaagatcag aaagagttaa
      361 atctgtggat ctgcatccaa cagagccatg gattctcaca agtttgtatt caggaactgt
      421 ctgtatctgg gattatcagt ctcagactat ggctaaatcc ttcgaggtta ctgagttacc
      481 agtcagatca gcaaagtttg tgtcccgcaa acagtgggtt gttgctggag cagatgacat
      541 gtttatccgt gtatacaatt acaatacaat ggataaagtg aaagtatacg aggcgcatac
      601 agattatatt cggtgtgtgg ctgtccaccc taccctccca tatatacttt catcttctga
      661 tgacatgctt atcaagcttt gggactggga gaagagttgg tattgcacac aaatattcga
      721 gggacattcc cattacgtta tgcaagtgac gattaatcct aaagacacca atacttttgc
      781 aagtgcatca cttgatcgca ccataaagat ctggaatctt ggctcacctg atcctaactt
      841 cacattagat gcccatctaa aaggtgtgaa ttgtgtggat tatttcacag gtggtgataa
      901 accttacctt attactgggt cagatgatca tactgctaag gtgtgggatt atcaaaccaa
      961 aacatgtgtc cagaccttag aaggtcacac acacaacgtt tcagcagtat gttttcatcc
     1021 agagcttcca attataatca caggttctga ggatggtact gtacgtatat ggcattcaac
     1081 tacttataga ctggaaaaca ctttgaacta cggacttgaa agggtttggg ctattggata
     1141 catgaaaagt tcacgacgga ttgctatcgg ctacgatgaa gggactataa tggtaaaagt
     1201 tggtagggaa gaacctgtag ctagcatgga caacagtgga aaaataatat gggctaagca
     1261 taatgaaatt cagactgtta acattaggag tgtgggagct gagtatgagg ttactgacgg
     1321 agagagattg cctttagcag ttaaagagtt gggaacatgt gatctctacc cacagagctt
     1381 gaaacacaac ccaaatggga ggtttgttgt tgtatgcggt gatggtgagt acattatata
     1441 cacagctttg gcatggagaa ataggtcctt tggctctgca ttggagattg tttggtcatc
     1501 tgatggtgaa tatgctgtta gggagagtac aactaagatt aagattttca ataaatcttt
     1561 tcaggaaaag aagagtatac ggccaacatt ttctgccgag cgcatatacg gaggttcttt
     1621 gttggcgata tgctcgaatg attttatatg tttttatgat tgggctgagt gtcgattgat
     1681 tcaacggatc gatgttggtg tcaagaacat atattgggct gatggtggtg atatggtggc
     1741 aattgccagt gattcgtcgt ttcacatatt acagtacaat cgtgatgttg tttctgcaca
     1801 tcttgatagt ggaagacctg tagacgagga tggtattgaa gaatcttttg acattttatc
     1861 tgaagtcagc gaaaaagttc gaactggatt gtgggttggg gactgtttta tttacactaa
     1921 ttcttcagga cgcctgaatt actgtgttgg tggcgaggta accacaatgt ttcatttgga
     1981 tcgaccaatg tatcttctag gatatctagc taatcaaagc agggtttatc tcattgacaa
     2041 ggaatttaat gtcattggat acacattgtt gctccccttg atcgagtata agacccttgt
     2101 tatgcgtgga gaccttgaac gagctagtgg tgtattgcca tcaattccaa aagagcatca
     2161 taatagtgtt gctcattttc tggaatcacg aggaatgatt gaagaggcat tagaagttgc
     2221 cacagatccg gactatagat ttgagctggc aattcagctt ggtaaactag agattgctaa
     2281 ggatattgcc ttcgttgcac aaagcgagtc gaaatggaag cagttgggtg aattagctat
     2341 gtctactgga ctgttggacc tggccgaaga ttgtttaaag catgcaaaag atttgagtgg
     2401 tctgctactg ctctattctt ctctgggaga tgccgatgag atagaaaaac ttgcatctct
     2461 tgcaaaagag agtgggaaaa acaatgttgc ttttgcttgt ctatttatgc tgggtaaatt
     2521 ggaagattgt ctgcagttgt tggttgacag caatcggata cctgaggctg ctctgatggc
     2581 acggtcttat cttccaagca aggtttcaga aatagttgct ttatggagaa aagaccttaa
     2641 caaggttaac caaaaagcgg cggagtcttt agccgatcct gaagagtacc caaatatgtt
     2701 tgaggactgg caagttgcac ttgaagttga agcaagagct gcagagacaa ggggtagtta
     2761 tcctcctgca acagaatatg tgaactatgt tgatagatct catgtcaacc ttgtggaggt
     2821 tttcaaacac atgcaacttg acgatgagga actacatgaa aatggagagc tggatcatga
     2881 ggacgttgaa gaaaacggaa atgaagggga atttgttgct ggtcaagatg caagccaaga
     2941 agaagacggc gttgcaatgg ataatgattc ttcagacggc gccgtactcg ttaatggtaa
     3001 cgagggtgaa gaagaagaag aagagtgggg tacgaataat gcagcaaatc cgtcagccta
     3061 aaaggaattg gttggggcag tatgaatttc cttatttatt tgctctgtgc ttacaccacg
     3121 tcagtaagtt ggctccaggc gttgttttcc tgcttcacaa ctccttcagg tacctgttcg
     3181 tggtgtaatt ttgtaagcac gtcgattttt gtatgttggg acatatcata tgat
//
LOCUS       XM_071886366            3207 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides coatomer subunit
            beta'-2-like (LOC139904431), transcript variant X2, mRNA.
ACCESSION   XM_071886366
VERSION     XM_071886366.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3207
                     /gene="LOC139904431"
                     /note="coatomer subunit beta'-2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     Proteins"
                     /db_xref="GeneID:139904431"
     CDS             306..3062
                     /gene="LOC139904431"
                     /codon_start=1
                     /product="coatomer subunit beta'-2-like isoform X1"
                     /protein_id="XP_071742467.1"
                     /db_xref="GeneID:139904431"
                     /translation="MPLRLEIKRKLAQRSERVKSVDLHPTEPWILTSLYSGTVCIWDY
                     QSQTMAKSFEVTELPVRSAKFVSRKQWVVAGADDMFIRVYNYNTMDKVKVYEAHTDYI
                     RCVAVHPTLPYILSSSDDMLIKLWDWEKSWYCTQIFEGHSHYVMQVTINPKDTNTFAS
                     ASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT
                     KTCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWA
                     IGYMKSSRRIAIGYDEGTIMVKVGREEPVASMDNSGKIIWAKHNEIQTVNIRSVGAEY
                     EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSA
                     LEIVWSSDGEYAVRESTTKIKIFNKSFQEKKSIRPTFSAERIYGGSLLAICSNDFICF
                     YDWAECRLIQRIDVGVKNIYWADGGDMVAIASDSSFHILQYNRDVVSAHLDSGRPVDE
                     DGIEESFDILSEVSEKVRTGLWVGDCFIYTNSSGRLNYCVGGEVTTMFHLDRPMYLLG
                     YLANQSRVYLIDKEFNVIGYTLLLPLIEYKTLVMRGDLERASGVLPSIPKEHHNSVAH
                     FLESRGMIEEALEVATDPDYRFELAIQLGKLEIAKDIAFVAQSESKWKQLGELAMSTG
                     LLDLAEDCLKHAKDLSGLLLLYSSLGDADEIEKLASLAKESGKNNVAFACLFMLGKLE
                     DCLQLLVDSNRIPEAALMARSYLPSKVSEIVALWRKDLNKVNQKAAESLADPEEYPNM
                     FEDWQVALEVEARAAETRGSYPPATEYVNYVDRSHVNLVEVFKHMQLDDEELHENGEL
                     DHEDVEENGNEGEFVAGQDASQEEDGVAMDNDSSDGAVLVNGNEGEEEEEEWGTNNAA
                     NPSA"
     misc_feature    354..1196
                     /gene="LOC139904431"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    363..470
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    order(399..401,411..413,429..434,468..473,525..527,
                     537..539,555..560,594..599,648..650,663..665,681..686,
                     726..728,780..782,795..797,813..818,852..857,915..917,
                     927..929,945..950,984..989,1038..1040,1053..1055,
                     1071..1076,1110..1115,1167..1169,1179..1181)
                     /gene="LOC139904431"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    612..725
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    738..851
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    870..983
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    999..1091
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1215..2642
                     /gene="LOC139904431"
                     /note="Coatomer WD Associated Region from Coatomer Subunit
                     Beta and Beta'; Region: Coatomer_WDAD_beta-like; cd22947"
                     /db_xref="CDD:438572"
     misc_feature    1215..1349
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1365..1469
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1371..1475
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1482..1595
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1485..1583
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1599..1694
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1701..1811
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1704..1865
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1875..1994
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    order(1974..1976,2064..2066,2421..2429,2508..2513,
                     2574..2579,2586..2588)
                     /gene="LOC139904431"
                     /note="coatomer beta'-subunit binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:438572"
     misc_feature    1995..2069
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
ORIGIN      
        1 aacatttagt tggattgtca aaccccaccc taattttctt ttaatatttt ttctcaaacc
       61 aattttaccc aggtccaagt aaacatacaa aacctctcta tctctacatc tggatcatgt
      121 tattgatttt tgatctcgat ctcaatttca tttaatacac tcaaatcttt taattcgggc
      181 gtaaatacag tgtatctgta tctacacccc tctcggtggt attaccggat ttcacactcg
      241 gatcttaggg tttcaggatt cagttacgaa tttcaaatca ataacctaac tctcagtttg
      301 cagcaatgcc tctcagactc gagatcaaga ggaaacttgc tcaaagatca gaaagagtta
      361 aatctgtgga tctgcatcca acagagccat ggattctcac aagtttgtat tcaggaactg
      421 tctgtatctg ggattatcag tctcagacta tggctaaatc cttcgaggtt actgagttac
      481 cagtcagatc agcaaagttt gtgtcccgca aacagtgggt tgttgctgga gcagatgaca
      541 tgtttatccg tgtatacaat tacaatacaa tggataaagt gaaagtatac gaggcgcata
      601 cagattatat tcggtgtgtg gctgtccacc ctaccctccc atatatactt tcatcttctg
      661 atgacatgct tatcaagctt tgggactggg agaagagttg gtattgcaca caaatattcg
      721 agggacattc ccattacgtt atgcaagtga cgattaatcc taaagacacc aatacttttg
      781 caagtgcatc acttgatcgc accataaaga tctggaatct tggctcacct gatcctaact
      841 tcacattaga tgcccatcta aaaggtgtga attgtgtgga ttatttcaca ggtggtgata
      901 aaccttacct tattactggg tcagatgatc atactgctaa ggtgtgggat tatcaaacca
      961 aaacatgtgt ccagacctta gaaggtcaca cacacaacgt ttcagcagta tgttttcatc
     1021 cagagcttcc aattataatc acaggttctg aggatggtac tgtacgtata tggcattcaa
     1081 ctacttatag actggaaaac actttgaact acggacttga aagggtttgg gctattggat
     1141 acatgaaaag ttcacgacgg attgctatcg gctacgatga agggactata atggtaaaag
     1201 ttggtaggga agaacctgta gctagcatgg acaacagtgg aaaaataata tgggctaagc
     1261 ataatgaaat tcagactgtt aacattagga gtgtgggagc tgagtatgag gttactgacg
     1321 gagagagatt gcctttagca gttaaagagt tgggaacatg tgatctctac ccacagagct
     1381 tgaaacacaa cccaaatggg aggtttgttg ttgtatgcgg tgatggtgag tacattatat
     1441 acacagcttt ggcatggaga aataggtcct ttggctctgc attggagatt gtttggtcat
     1501 ctgatggtga atatgctgtt agggagagta caactaagat taagattttc aataaatctt
     1561 ttcaggaaaa gaagagtata cggccaacat tttctgccga gcgcatatac ggaggttctt
     1621 tgttggcgat atgctcgaat gattttatat gtttttatga ttgggctgag tgtcgattga
     1681 ttcaacggat cgatgttggt gtcaagaaca tatattgggc tgatggtggt gatatggtgg
     1741 caattgccag tgattcgtcg tttcacatat tacagtacaa tcgtgatgtt gtttctgcac
     1801 atcttgatag tggaagacct gtagacgagg atggtattga agaatctttt gacattttat
     1861 ctgaagtcag cgaaaaagtt cgaactggat tgtgggttgg ggactgtttt atttacacta
     1921 attcttcagg acgcctgaat tactgtgttg gtggcgaggt aaccacaatg tttcatttgg
     1981 atcgaccaat gtatcttcta ggatatctag ctaatcaaag cagggtttat ctcattgaca
     2041 aggaatttaa tgtcattgga tacacattgt tgctcccctt gatcgagtat aagacccttg
     2101 ttatgcgtgg agaccttgaa cgagctagtg gtgtattgcc atcaattcca aaagagcatc
     2161 ataatagtgt tgctcatttt ctggaatcac gaggaatgat tgaagaggca ttagaagttg
     2221 ccacagatcc ggactataga tttgagctgg caattcagct tggtaaacta gagattgcta
     2281 aggatattgc cttcgttgca caaagcgagt cgaaatggaa gcagttgggt gaattagcta
     2341 tgtctactgg actgttggac ctggccgaag attgtttaaa gcatgcaaaa gatttgagtg
     2401 gtctgctact gctctattct tctctgggag atgccgatga gatagaaaaa cttgcatctc
     2461 ttgcaaaaga gagtgggaaa aacaatgttg cttttgcttg tctatttatg ctgggtaaat
     2521 tggaagattg tctgcagttg ttggttgaca gcaatcggat acctgaggct gctctgatgg
     2581 cacggtctta tcttccaagc aaggtttcag aaatagttgc tttatggaga aaagacctta
     2641 acaaggttaa ccaaaaagcg gcggagtctt tagccgatcc tgaagagtac ccaaatatgt
     2701 ttgaggactg gcaagttgca cttgaagttg aagcaagagc tgcagagaca aggggtagtt
     2761 atcctcctgc aacagaatat gtgaactatg ttgatagatc tcatgtcaac cttgtggagg
     2821 ttttcaaaca catgcaactt gacgatgagg aactacatga aaatggagag ctggatcatg
     2881 aggacgttga agaaaacgga aatgaagggg aatttgttgc tggtcaagat gcaagccaag
     2941 aagaagacgg cgttgcaatg gataatgatt cttcagacgg cgccgtactc gttaatggta
     3001 acgagggtga agaagaagaa gaagagtggg gtacgaataa tgcagcaaat ccgtcagcct
     3061 aaaaggaatt ggttggggca tgcttacacc acgtcagtaa gttggctcca ggcgttgttt
     3121 tcctgcttca caactccttc aggtacctgt tcgtggtgta attttgtaag cacgtcgatt
     3181 tttgtatgtt gggacatatc atatgat
//
LOCUS       XM_071886367            3408 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides coatomer subunit
            beta'-2-like (LOC139904431), transcript variant X3, mRNA.
ACCESSION   XM_071886367
VERSION     XM_071886367.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3408
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3408
                     /gene="LOC139904431"
                     /note="coatomer subunit beta'-2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139904431"
     CDS             307..3051
                     /gene="LOC139904431"
                     /codon_start=1
                     /product="coatomer subunit beta'-1-like isoform X2"
                     /protein_id="XP_071742468.1"
                     /db_xref="GeneID:139904431"
                     /translation="MPLRLEIKRKLAQRSERVKSVDLHPTEPWILTSLYSGTVCIWDY
                     QSQTMAKSFEVTELPVRSAKFVSRKQWVVAGADDMFIRVYNYNTMDKVKVYEAHTDYI
                     RCVAVHPTLPYILSSSDDMLIKLWDWEKSWYCTQIFEGHSHYVMQVTINPKDTNTFAS
                     ASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT
                     KTCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWA
                     IGYMKSSRRIAIGYDEGTIMVKVGREEPVASMDNSGKIIWAKHNEIQTVNIRSVGAEY
                     EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSA
                     LEIVWSSDGEYAVRESTTKIKIFNKSFQEKKSIRPTFSAERIYGGSLLAICSNDFICF
                     YDWAECRLIQRIDVGVKNIYWADGGDMVAIASDSSFHILQYNRDVVSAHLDSGRPVDE
                     DGIEESFDILSEVSEKVRTGLWVGDCFIYTNSSGRLNYCVGGEVTTMFHLDRPMYLLG
                     YLANQSRVYLIDKEFNVIGYTLLLPLIEYKTLVMRGDLERASGVLPSIPKEHHNSVAH
                     FLESRGMIEEALEVATDPDYRFELAIQLGKLEIAKDIAFVAQSESKWKQLGELAMSTG
                     LLDLAEDCLKHAKDLSGLLLLYSSLGDADEIEKLASLAKESGKNNVAFACLFMLGKLE
                     DCLQLLVDSNRIPEAALMARSYLPSKVSEIVALWRKDLNKVNQKAAESLADPEEYPNM
                     FEDWQVALEVEARAAETRGSYPPATEYVNYVDRSHVNLVEVFKHMQLDDEELHENGEL
                     DHEDVEENGNEGEFVAGQDASQEEDGVAMDNDSSDGAVLVNGNEGEEEEEEWVLTPRQ
                     "
     misc_feature    355..1197
                     /gene="LOC139904431"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    364..471
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    order(400..402,412..414,430..435,469..474,526..528,
                     538..540,556..561,595..600,649..651,664..666,682..687,
                     727..729,781..783,796..798,814..819,853..858,916..918,
                     928..930,946..951,985..990,1039..1041,1054..1056,
                     1072..1077,1111..1116,1168..1170,1180..1182)
                     /gene="LOC139904431"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    613..726
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    739..852
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    871..984
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1000..1092
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1216..2643
                     /gene="LOC139904431"
                     /note="Coatomer WD Associated Region from Coatomer Subunit
                     Beta and Beta'; Region: Coatomer_WDAD_beta-like; cd22947"
                     /db_xref="CDD:438572"
     misc_feature    1216..1350
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1366..1470
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1372..1476
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1483..1596
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1486..1584
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1600..1695
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1702..1812
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1705..1866
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    1876..1995
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     misc_feature    order(1975..1977,2065..2067,2422..2430,2509..2514,
                     2575..2580,2587..2589)
                     /gene="LOC139904431"
                     /note="coatomer beta'-subunit binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:438572"
     misc_feature    1996..2070
                     /gene="LOC139904431"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438572"
     polyA_site      3408
                     /gene="LOC139904431"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caacatttag ttggattgtc aaaccccacc ctaattttct tttaatattt tttctcaaac
       61 caattttacc caggtccaag taaacataca aaacctctct atctctacat ctggatcatg
      121 ttattgattt ttgatctcga tctcaatttc atttaataca ctcaaatctt ttaattcggg
      181 cgtaaataca gtgtatctgt atctacaccc ctctcggtgg tattaccgga tttcacactc
      241 ggatcttagg gtttcaggat tcagttacga atttcaaatc aataacctaa ctctcagttt
      301 gcagcaatgc ctctcagact cgagatcaag aggaaacttg ctcaaagatc agaaagagtt
      361 aaatctgtgg atctgcatcc aacagagcca tggattctca caagtttgta ttcaggaact
      421 gtctgtatct gggattatca gtctcagact atggctaaat ccttcgaggt tactgagtta
      481 ccagtcagat cagcaaagtt tgtgtcccgc aaacagtggg ttgttgctgg agcagatgac
      541 atgtttatcc gtgtatacaa ttacaataca atggataaag tgaaagtata cgaggcgcat
      601 acagattata ttcggtgtgt ggctgtccac cctaccctcc catatatact ttcatcttct
      661 gatgacatgc ttatcaagct ttgggactgg gagaagagtt ggtattgcac acaaatattc
      721 gagggacatt cccattacgt tatgcaagtg acgattaatc ctaaagacac caatactttt
      781 gcaagtgcat cacttgatcg caccataaag atctggaatc ttggctcacc tgatcctaac
      841 ttcacattag atgcccatct aaaaggtgtg aattgtgtgg attatttcac aggtggtgat
      901 aaaccttacc ttattactgg gtcagatgat catactgcta aggtgtggga ttatcaaacc
      961 aaaacatgtg tccagacctt agaaggtcac acacacaacg tttcagcagt atgttttcat
     1021 ccagagcttc caattataat cacaggttct gaggatggta ctgtacgtat atggcattca
     1081 actacttata gactggaaaa cactttgaac tacggacttg aaagggtttg ggctattgga
     1141 tacatgaaaa gttcacgacg gattgctatc ggctacgatg aagggactat aatggtaaaa
     1201 gttggtaggg aagaacctgt agctagcatg gacaacagtg gaaaaataat atgggctaag
     1261 cataatgaaa ttcagactgt taacattagg agtgtgggag ctgagtatga ggttactgac
     1321 ggagagagat tgcctttagc agttaaagag ttgggaacat gtgatctcta cccacagagc
     1381 ttgaaacaca acccaaatgg gaggtttgtt gttgtatgcg gtgatggtga gtacattata
     1441 tacacagctt tggcatggag aaataggtcc tttggctctg cattggagat tgtttggtca
     1501 tctgatggtg aatatgctgt tagggagagt acaactaaga ttaagatttt caataaatct
     1561 tttcaggaaa agaagagtat acggccaaca ttttctgccg agcgcatata cggaggttct
     1621 ttgttggcga tatgctcgaa tgattttata tgtttttatg attgggctga gtgtcgattg
     1681 attcaacgga tcgatgttgg tgtcaagaac atatattggg ctgatggtgg tgatatggtg
     1741 gcaattgcca gtgattcgtc gtttcacata ttacagtaca atcgtgatgt tgtttctgca
     1801 catcttgata gtggaagacc tgtagacgag gatggtattg aagaatcttt tgacatttta
     1861 tctgaagtca gcgaaaaagt tcgaactgga ttgtgggttg gggactgttt tatttacact
     1921 aattcttcag gacgcctgaa ttactgtgtt ggtggcgagg taaccacaat gtttcatttg
     1981 gatcgaccaa tgtatcttct aggatatcta gctaatcaaa gcagggttta tctcattgac
     2041 aaggaattta atgtcattgg atacacattg ttgctcccct tgatcgagta taagaccctt
     2101 gttatgcgtg gagaccttga acgagctagt ggtgtattgc catcaattcc aaaagagcat
     2161 cataatagtg ttgctcattt tctggaatca cgaggaatga ttgaagaggc attagaagtt
     2221 gccacagatc cggactatag atttgagctg gcaattcagc ttggtaaact agagattgct
     2281 aaggatattg ccttcgttgc acaaagcgag tcgaaatgga agcagttggg tgaattagct
     2341 atgtctactg gactgttgga cctggccgaa gattgtttaa agcatgcaaa agatttgagt
     2401 ggtctgctac tgctctattc ttctctggga gatgccgatg agatagaaaa acttgcatct
     2461 cttgcaaaag agagtgggaa aaacaatgtt gcttttgctt gtctatttat gctgggtaaa
     2521 ttggaagatt gtctgcagtt gttggttgac agcaatcgga tacctgaggc tgctctgatg
     2581 gcacggtctt atcttccaag caaggtttca gaaatagttg ctttatggag aaaagacctt
     2641 aacaaggtta accaaaaagc ggcggagtct ttagccgatc ctgaagagta cccaaatatg
     2701 tttgaggact ggcaagttgc acttgaagtt gaagcaagag ctgcagagac aaggggtagt
     2761 tatcctcctg caacagaata tgtgaactat gttgatagat ctcatgtcaa ccttgtggag
     2821 gttttcaaac acatgcaact tgacgatgag gaactacatg aaaatggaga gctggatcat
     2881 gaggacgttg aagaaaacgg aaatgaaggg gaatttgttg ctggtcaaga tgcaagccaa
     2941 gaagaagacg gcgttgcaat ggataatgat tcttcagacg gcgccgtact cgttaatggt
     3001 aacgagggtg aagaagaaga agaagagtgg gtgcttacac cacgtcagta agttggctcc
     3061 aggcgttgtt ttcctgcttc acaactcctt caggtacctg ttcgtggtgt aattttgtaa
     3121 gcacgtcgat ttttgtatgt tgggacatat catatgatat atatatatag acttcaccct
     3181 tcagtttagt aactctgagt ttagttgttc tataggcact ccgtatctat tttctttttt
     3241 aggcgattaa tttcatcctt cagatcatat tactatttta tatgttattg tgaatgtgaa
     3301 tgtaaaaaac gacgactata gcagtatagc ttgtttgggg tgcgaggtga caacaattat
     3361 atgactgttt ttatctacaa ttgtaatgta ctgtgtttga ttgcactt
//
LOCUS       XR_011778792             660 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904432), ncRNA.
ACCESSION   XR_011778792
VERSION     XR_011778792.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139904432"
                     /note="uncharacterized LOC139904432; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904432"
     ncRNA           1..660
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904432"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904432"
ORIGIN      
        1 ccatgtttac tttttagggt cattacaata ttaaattaac ttaaatttct tatttatgta
       61 ttgatagggg tgaagacctg tttatttctg tttggaatct tcatcgttct ccgacacctt
      121 gggtagatgc ggataaattt aatcccgaaa ggtggccttt ggatggacct aattccaacg
      181 agaccaacaa aaacttcagt tacttgccct ttggtgacgg acaaaagaaa ggtgtcggcg
      241 acatgtttgc ttcgtttgag gccatagtag cagtctcgat gcttgttcgt agatataaat
      301 ttcaaatggc attgggagca cctcttgaag tcacattatc cttattctct ataatcttat
      361 tctatcgaat taaatctaaa aatgtgacaa atagctcatt tcatattaag acgtattatg
      421 gcttagaaaa acagtttggt tagacgttaa ggaaagttta aaaaaaaaat ttgtgtgaca
      481 ggcaaaatta aaatatttta cggctccgtt tgtctcatgt cagagctgaa tgtatcacac
      541 gggttaaaag tttttgaatg tttacttaaa tgtttacata ttggcttgtg cagtttgtgg
      601 aagtgacaac ttgggtgtgt tggtaatagg ttaatgggtt tgtggcaata tggccatatg
//
LOCUS       XR_011778793             451 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904433), transcript variant X1, ncRNA.
ACCESSION   XR_011778793
VERSION     XR_011778793.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..451
                     /gene="LOC139904433"
                     /note="uncharacterized LOC139904433; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904433"
     ncRNA           1..451
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904433"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904433"
ORIGIN      
        1 ctattgagta tgatcagaca attgggagct gtgtgaactg tggtagactt gcttgggcag
       61 cgtatttgat gataatacaa caaagatgta actgatttaa gggacacaat taatgacacg
      121 agaaatatta aatcatgcat ggagaatgat gacgaggata tgatctacat gtataataca
      181 tatacttgca caagctgata acatcttttc tatctcaccc acttgctaga cacaagtagg
      241 tcaagaaaac caaggagaag gccatgattg ctctcacctc gagtttgtta gtgaaattta
      301 tgaggtttac gatattaccc atccacaatc gcgtttctca atcctttaaa atgccctcat
      361 tgctgaagaa agggatacaa ctgatagggg gcgtagcggg catacgcaga tccttctgag
      421 aaacggcagt tgggtgttgc atgtcttcaa c
//
LOCUS       XR_011778794             448 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904433), transcript variant X2, ncRNA.
ACCESSION   XR_011778794
VERSION     XR_011778794.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..448
                     /gene="LOC139904433"
                     /note="uncharacterized LOC139904433; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904433"
     ncRNA           1..448
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904433"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904433"
ORIGIN      
        1 ctattgagta tgatcagaca attgggagct gtgtgaactg tggtagactt gcttgggcag
       61 cgtatttgat gataatacaa caaagatgta actgatttaa gggacacaat taatgacacg
      121 agaaatatta aatcatgcat ggagaatgat gacgaggata tgatctacat gtataataca
      181 tatacttgca caagctgata acatcttttc tatctcaccc acttgctaga cacaaggtca
      241 agaaaaccaa ggagaaggcc atgattgctc tcacctcgag tttgttagtg aaatttatga
      301 ggtttacgat attacccatc cacaatcgcg tttctcaatc ctttaaaatg ccctcattgc
      361 tgaagaaagg gatacaactg atagggggcg tagcgggcat acgcagatcc ttctgagaaa
      421 cggcagttgg gtgttgcatg tcttcaac
//
LOCUS       XM_071886368            2279 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides plastidic
            ATP/ADP-transporter-like (LOC139904434), mRNA.
ACCESSION   XM_071886368
VERSION     XM_071886368.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2279
                     /gene="LOC139904434"
                     /note="plastidic ATP/ADP-transporter-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139904434"
     CDS             159..2036
                     /gene="LOC139904434"
                     /codon_start=1
                     /product="plastidic ATP/ADP-transporter-like"
                     /protein_id="XP_071742469.1"
                     /db_xref="GeneID:139904434"
                     /translation="MEGVIQTKGLLSLPSNPQTKIFLNKLPHKSLRQRVNLSSNPINP
                     TSGLSLNFNGSKKFQAFGTNHGLFSLQKPRCFHVCKASAAAGDGAAVPAGAGELEVEG
                     PKFMGIEVLTLKKIVPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVN
                     LPMAIGFMLLYTKLANVLSKKALFYTVILPFIAFFGAFGFVLYPMSNYFHPTALADRL
                     LDFLGPRFLGPLAILRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTVEEAKKFYPL
                     FGLGANVALIFSGRTVKYFSNMRKHLGPGVDGWAISLKYMMSIVVIMGFAICGLYWWV
                     NTFVPLPTRSKKKKEKPNMTTMESLKFLVSSPYIRDLATLVVAYGISINLVEVTWKSK
                     LKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQWIFNKYGWGVAAKITPTVLLITGV
                     GFFSLILFGGPLAPGLMSFGITPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLD
                     EDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVIAWLGA
                     AKSLDTQFTALRKEEELEKEMERAAVKIPIVSADVDTNGSLGSDSNTNSSAETSFPRN
                     A"
     misc_feature    480..1880
                     /gene="LOC139904434"
                     /note="ADP/ATP carrier protein family; Region: AAA;
                     TIGR00769"
                     /db_xref="CDD:273262"
     polyA_site      2279
                     /gene="LOC139904434"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaaccttta tgttaaacaa atttgcacac cttcacacta tcttccttca cattatccct
       61 ctatctcttt tcttcttatc ttttcagttt cttgatttta tcaagaactg aaaacaaaaa
      121 gagagagaga tttagaggtg tgtatctata agcaaacaat ggaaggtgtc atccaaacaa
      181 aaggtctttt atcactccct tcaaacccac aaaccaaaat ctttctcaac aaattaccac
      241 acaaatcttt aagacaaaga gtcaatcttt cttcaaatcc catcaacccc acatctgggt
      301 tatctttaaa ttttaatggg tctaaaaaat ttcaagcgtt tggtacaaac catggtttat
      361 tttccctcca aaaacccaga tgttttcatg tttgtaaagc ttccgccgcc gccggtgacg
      421 gcgctgcggt accggcaggc gccggtgaat tggaggttga aggacctaag tttatgggta
      481 ttgaagtatt gaccttaaaa aagattgtac cgttagggtt aatgtttttt tgtattctat
      541 ttaattatac aattcttagg gatacaaaag atgtattagt ggtaacagca aaaggttcaa
      601 gtgcagaaat tatacccttt ttgaaaactt gggttaattt gccaatggca attgggttta
      661 tgttattgta tacaaaattg gctaatgtgt tatcaaaaaa ggcactgttt tacactgtaa
      721 ttcttccgtt tatcgcgttt tttggggctt ttgggtttgt tttgtatcca atgagcaatt
      781 attttcaccc aactgcactt gctgatagac ttttggactt tttgggacct cgatttcttg
      841 gaccgcttgc tatattgagg atttggagtt tttgtttgtt ttatgtgatg gctgagcttt
      901 ggggaagtgt tgttgtttcg gtcttgtttt ggggatttgc taatcagata acaactgtgg
      961 aagaagccaa gaagttctat ccgttattcg ggcttggagc caatgttgcc ttaattttct
     1021 cgggccgtac cgtgaagtac ttttcgaata tgcggaagca tttgggcccg ggagtcgatg
     1081 ggtgggccat ttctttaaaa tacatgatga gtattgttgt gataatgggt tttgcaattt
     1141 gtggtcttta ttggtgggtc aatactttcg ttcctcttcc cacccgtagc aagaagaaga
     1201 aggagaagcc taacatgact acaatggaga gtttgaaatt cttggtttca tcgccataca
     1261 ttagggattt ggctacgttg gttgtagcat acggaattag cattaatctt gttgaggtta
     1321 catggaaatc gaagctcaag gctcagtttc caagtccaaa tgagtactct tctttcatgg
     1381 gtgacttttc gaccgcaact ggaatagcaa cattcacaat gatgcttttg agtcaatgga
     1441 tattcaacaa gtacggttgg ggagtggctg ccaaaattac accgacggtc cttcttataa
     1501 ctggtgttgg cttcttttct ttgatcttgt tcggtggtcc ccttgcacct ggtcttatga
     1561 gcttcgggat aactccgctt ttagctgcgg tctatgtcgg cgcaatgcaa aacatattta
     1621 gcaaaagtgc gaaatacagt ttgtttgacc cttgcaagga aatggcttat attccactcg
     1681 atgaagacac caaggttaaa ggtaaggcag cgatagatgt ggtgtgcaac ccattgggga
     1741 aatcaggagg agctctaatt caacaattca tgatcttaac attcggttca cttgcaaact
     1801 cgacacctta ccttggcggt gtacttttag tgatcgtgat agcatggtta ggtgccgcaa
     1861 agtcattgga cactcaattc accgctttaa gaaaagaaga agagctcgag aaagagatgg
     1921 aacgagctgc tgttaaaatc ccaattgtct ctgctgacgt ggacacaaac gggtcattgg
     1981 gtagcgattc aaacaccaac agttcagcag aaacatcgtt tccaaggaac gcttgaattt
     2041 gagattggta atttttatag aattttaggg ttggatggat acaaagataa agattgaaac
     2101 ttttagatga gtttaaagtt tcgttgcgat agaataataa gaacaaaggc aggaatggat
     2161 gctgttgaca tttgaggtat ttgttgttat attattgtta ttgttatatg ttcatttgag
     2221 atgtttgtag aagaaacatc atcctgatgt tgttaatctg atcaagttca tttcctttt
//
LOCUS       XR_011778795             974 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904435), transcript variant X1, ncRNA.
ACCESSION   XR_011778795
VERSION     XR_011778795.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..974
                     /gene="LOC139904435"
                     /note="uncharacterized LOC139904435; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904435"
     ncRNA           1..974
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904435"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904435"
ORIGIN      
        1 attgtgccat tacaacaaaa tctcttgcat aatcccgcga atccgcgtgt cttaaactag
       61 tacactttca attgacaagg aataatattt caacggatta atcaatcggc tctcaataac
      121 gatgaattgt gaaactaatc gattaatcag gctaaatcgg agaacgtgca gtggatgttt
      181 agaggtttac ctgttacaac tgatttacaa gatattgttg aatctgaatc aagtatgtga
      241 attagataat atactacgta tatgttaaca cgttaaaggt cagcaaacga aaaaaattgg
      301 ggaattaagg tttaaaaacg aagccgattt taaaaggtga taggttggga tacacctcaa
      361 agcggtgata aagttgaagg gtcaacaatg gaggagatgc atttgataaa taaactgctt
      421 ttggatcaaa gtttagatgc ttcttttgag aaacggtatc tgctatgatt ttgaatttat
      481 atgcttaatt gcgatattct ttttagttaa gattggatat aaaggtctta cgttcgaatc
      541 ttgtggtggc caaggaagtg ttggagacag ccagggagta attttgatgg gctgcgtagg
      601 gagtaattgc gatattcttt tttagcggtt gtttggatgt atgcatttat ataaattgat
      661 tctttcttaa gagcactagc tagaatacgg gaaccttaaa ttataacatt aaagacatat
      721 atagaaaagt tatagaaatt tctaaaaaac ttggtcattc catacacaaa aggactgtaa
      781 gttcaaattt tctcatccag tacacaaaaa gcttgatcca acccatttaa cctgtttgat
      841 ccaacccacc taagaaaagg caaaagaaaa gtggtggcgc cgagtgttgt tttcctgaag
      901 ttggttttag cggtatgggg tttgtgctgc cgtctgtgtc gcacaaacgg tcgtttttat
      961 atgtacttat atga
//
LOCUS       XR_011778796             937 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904435), transcript variant X2, ncRNA.
ACCESSION   XR_011778796
VERSION     XR_011778796.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..937
                     /gene="LOC139904435"
                     /note="uncharacterized LOC139904435; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904435"
     ncRNA           1..937
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904435"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904435"
ORIGIN      
        1 attgtgccat tacaacaaaa tctcttgcat aatcccgcga atccgcgtgt cttaaactag
       61 tacactttca attgacaagg aataatattt caacggatta atcaatcggc tctcaataac
      121 gatgaattgt gaaactaatc gattaatcag gctaaatcgg agaacgtgca gtggatgttt
      181 agaggtttac ctgttacaac tgatttacaa gatattgttg aatctgaatc aaacgttaaa
      241 ggtcagcaaa cgaaaaaaat tggggaatta aggtttaaaa acgaagccga ttttaaaagg
      301 tgataggttg ggatacacct caaagcggtg ataaagttga agggtcaaca atggaggaga
      361 tgcatttgat aaataaactg cttttggatc aaagtttaga tgcttctttt gagaaacggt
      421 atctgctatg attttgaatt tatatgctta attgcgatat tctttttagt taagattgga
      481 tataaaggtc ttacgttcga atcttgtggt ggccaaggaa gtgttggaga cagccaggga
      541 gtaattttga tgggctgcgt agggagtaat tgcgatattc ttttttagcg gttgtttgga
      601 tgtatgcatt tatataaatt gattctttct taagagcact agctagaata cgggaacctt
      661 aaattataac attaaagaca tatatagaaa agttatagaa atttctaaaa aacttggtca
      721 ttccatacac aaaaggactg taagttcaaa ttttctcatc cagtacacaa aaagcttgat
      781 ccaacccatt taacctgttt gatccaaccc acctaagaaa aggcaaaaga aaagtggtgg
      841 cgccgagtgt tgttttcctg aagttggttt tagcggtatg gggtttgtgc tgccgtctgt
      901 gtcgcacaaa cggtcgtttt tatatgtact tatatga
//
LOCUS       XM_071886369             769 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904436), mRNA.
ACCESSION   XM_071886369
VERSION     XM_071886369.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..769
                     /gene="LOC139904436"
                     /note="uncharacterized LOC139904436; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904436"
     CDS             267..743
                     /gene="LOC139904436"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742470.1"
                     /db_xref="GeneID:139904436"
                     /translation="MTTNEENLDGLDHNEGGTREEEGDDLKTLLAKALENYLPFMVKK
                     IKETMEEAVKTTIADMITEALSNEFDRRLPHVNVEGENLINEGGARVNREIVPSKPYS
                     LKDFKLSNPPTYTGDLNPIVSSRWISDIEGCFRTTRCPNDLKTTFGTCMLRGVAQR"
ORIGIN      
        1 aaaaatacat aacgagagaa gagagagtga ggcgattttg ggtgaaacca ttcacaaacc
       61 ctagattttc ttccattcaa ttgaatctaa gggtgcaatc aacttagtta ctacttgcta
      121 gtgctactag aagctttgat ttttaatctt cttcatcttt ctagagattt gggggttttg
      181 taaactaacc ttgaggttaa gatacttgga attgggcttg aggaattatt gtgctttggt
      241 tgtaattgac ttgcttacgg ttaagaatga cgactaatga agagaacctc gatggtttag
      301 accataatga aggtggcacc cgtgaagaag agggtgatga cttgaaaacc ctactagcaa
      361 aggcattaga aaattactta ccttttatgg ttaagaagat aaaagagact atggaagagg
      421 cagtaaagac tactattgcc gacatgatca ctgaggcatt gagtaatgaa tttgatcggc
      481 ggttaccaca tgttaatgtt gaaggtgaaa acttgattaa tgaaggcggg gcaagagtta
      541 atcgtgaaat tgttccttca aagccgtata gcttaaagga cttcaagttg agtaatccgc
      601 ccacttatac gggagacctt aacccaatag tgagtagtcg atggatctct gacattgaag
      661 gttgttttag aacaactcgc tgtcccaatg atttaaagac cacttttggg acatgtatgt
      721 taaggggagt tgcacaaaga tagtgggatg atcttttagt tgtagtgac
//
LOCUS       XR_011778797             594 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904437), transcript variant X1, ncRNA.
ACCESSION   XR_011778797
VERSION     XR_011778797.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..594
                     /gene="LOC139904437"
                     /note="uncharacterized LOC139904437; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904437"
     ncRNA           1..594
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904437"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904437"
ORIGIN      
        1 tcttcctagc gtacaattaa tcaagattca tccaaatcag attacttttt ctttttctcc
       61 aattcatata aaatccctat cataaattca tcaataaatc ttctcttctt caatcggatc
      121 atcaaaaaat tatctaatac agtatgaaga gtgatttaag atgatgattt tcaacttgtt
      181 actaatcaat tagaataaat aacttcgagg atcgtcgatg gtattgcggt gtattctcga
      241 accctatcat cctctcctgc cttttctgcc ttcctctttc aattccttaa cacaatttta
      301 ttccggaaat aaggatgaat gaaggtgtgg ttgattatgc acaaaccatc agatgttgag
      361 ctacagtctt cctgactgca tgaactgcac ctacacacat acgctatgtt agatggtgaa
      421 agacagcatc taaggttaaa tgactggtgt cacttggtgc ctagaggttt attgcttccg
      481 ctgttacact tgctgtcatg ctgttattga attgttgtta tggaccccta ctgtactagt
      541 tatccgctgc attactagag atgtctcaaa ttatgaaact tatgttttgc attc
//
LOCUS       XR_011778798             582 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904437), transcript variant X2, ncRNA.
ACCESSION   XR_011778798
VERSION     XR_011778798.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..582
                     /gene="LOC139904437"
                     /note="uncharacterized LOC139904437; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904437"
     ncRNA           1..582
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904437"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904437"
ORIGIN      
        1 tcttcctagc gtacaattaa tcaagattca tccaaatcag attacttttt ctttttctcc
       61 aattcatata aaatccctat cataaattca tcaataaatc ttctcttctt caatcggatc
      121 atcaaaaaat tatctaatac agtatgaaga gtgatttaag atgatgattt tcaacttgtt
      181 actaatcaat tagaataaat aacttcgagg atcgtcgatg gtattgcggt gtattctcga
      241 accctatcat cctctcctgc cttttctgcc ttcctctttc aattccttaa cacaatttta
      301 ttccggaaat aaggatgaat gaaggtgtgg ttgattatgc acaaaccatc agatgttgag
      361 ctacagtctt cctgactgca tgaactgcac ctacacacat acgctatgtt agatggtgaa
      421 agacagcatc taaggttaaa tgactggtgt cacttgatgt cggatattcc acctgtcatc
      481 attttggaca gcgattcaga ctcgtcagcc acctcaacta ctgttgctac cgacacacag
      541 atcccgttaa ccagtgaccc cggcgcttca tcctccggaa cc
//
LOCUS       XR_011778799             546 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904437), transcript variant X3, ncRNA.
ACCESSION   XR_011778799
VERSION     XR_011778799.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139904437"
                     /note="uncharacterized LOC139904437; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904437"
     ncRNA           1..546
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904437"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904437"
ORIGIN      
        1 tcttcctagc gtacaattaa tcaagattca tccaaatcag attacttttt ctttttctcc
       61 aattcatata aaatccctat cataaattca tcaataaatc ttctcttctt caatcggatc
      121 atcaaaaaat tatctaatac agtatgaaga gtgatttaag atgatgattt tcaacttgtt
      181 actaatcaat tagaataaat aacttcgagg atcgtcgatg gtattgcggt gtattctcga
      241 accctatcat cctctcctgc cttttctgcc ttcctctttc aattccttaa cacaatttta
      301 ttccggaaat aaggatgaat gaaggtgtgg ttgattatgc acaaaccatc agatgttgag
      361 ctacagtctt cctgactgca tgaactgcac ctacacacat acgctatgtt agatggtgaa
      421 agacagcatc taaggttaaa tgactggtgt cacttgactg catccattga tatatgacaa
      481 aaggttttaa attctaagtg ttatgtgaga taagatcttg agtaatcatc atccatcttt
      541 acagac
//
LOCUS       XM_071886370             974 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904439), mRNA.
ACCESSION   XM_071886370
VERSION     XM_071886370.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..974
                     /gene="LOC139904439"
                     /note="uncharacterized LOC139904439; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904439"
     CDS             14..955
                     /gene="LOC139904439"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742471.1"
                     /db_xref="GeneID:139904439"
                     /translation="MGRGKELDTKSPPDIEIQESGEIYFFYRPKVEKEEAHSSDDIQR
                     MYIVLRPESGERPVEVKQDVNDSPPKTAEGGHGAQEVNIEKQPLMRLIVMGRKSLPDP
                     SKKRGRPSWGFVELVTTNIQDVKDALKGEEYDTKTRGHRHKPPARPLAEGFYRILRHH
                     HTKDKKDDNKKMHTHLIYKLELPSEPESENQPQEALNVENEASFLIQIKNPDPNQQGR
                     TEFTGLKRKRRAAFPAHLQAQFGKLRYHPADPPDFLNYEGCEFLLIAASSDVQEELGL
                     DLETEEAHDHASCSDLVNTFGVGERGSADALPKGVWV"
ORIGIN      
        1 taataatata ttcatgggac gaggaaagga actagatacg aaaagcccac cagatattga
       61 gattcaggaa tcaggggaaa tatatttctt ttacagacct aaagtagaga aagaagaagc
      121 acacagctcc gatgatattc agcgtatgta catcgtttta cgacccgagt ccggggagag
      181 acccgttgaa gtcaagcagg atgtcaatga ctcacctcct aaaactgccg aaggtggcca
      241 tggtgcccag gaggtaaaca tagagaagca accgttgatg aggttgattg tgatgggccg
      301 aaaaagtctt ccggatccat ctaaaaaacg tggaagaccc tcttggggct ttgttgagtt
      361 ggtcaccacc aacattcaag atgtcaagga tgctttgaaa ggagaggaat atgatacaaa
      421 gacaagagga catagacaca agcctccagc tagaccatta gccgaaggct tctaccgcat
      481 acttaggcat caccatacca aagacaaaaa ggacgacaac aaaaaaatgc acacccattt
      541 gatttacaag ctcgagctcc catctgaacc agaatcagag aaccaaccgc aagaggctct
      601 aaacgtcgaa aacgaagctt ctttcctgat acaaatcaag aatccggacc cgaaccaaca
      661 aggccgaaca gagtttacag gacttaaaag aaagaggaga gctgcgtttc ccgcacacct
      721 gcaagcacaa ttcgggaaac ttcgttatca tcctgcagat ccccccgact ttttgaatta
      781 cgaaggatgt gagtttttgt tgatagcggc gtcatcggac gtacaagaag agcttggttt
      841 ggacctggaa actgaagaag cacatgatca tgcttcttgc tctgatcttg ttaatacttt
      901 tggagttgga gagcgcggat ctgcggatgc gcttcccaaa ggtgtttggg tttaaagttt
      961 gaactagtgt gttt
//
LOCUS       XM_071886371             495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein 7-like
            (LOC139904440), mRNA.
ACCESSION   XM_071886371
VERSION     XM_071886371.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139904440"
                     /note="zinc finger protein 7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904440"
     CDS             40..453
                     /gene="LOC139904440"
                     /codon_start=1
                     /product="zinc finger protein 7-like"
                     /protein_id="XP_071742472.1"
                     /db_xref="GeneID:139904440"
                     /translation="MSFLNLNLPESDLNSSSSSSLSNADHRVFPCNYCRRKFYSSQAL
                     GGHQNAHRIERNLAKKSRNLTSVVTAHSGYNRSVSSGSSHGRQVQPPVVMAHNHQEHA
                     GRFSGSEMGSVLDYSYKGENVDQEDFNQLDLSLRL"
     misc_feature    121..201
                     /gene="LOC139904440"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 tacgtagctc cgtaactatt attctctagc taattaacca tgagcttcct caatcttaac
       61 ctaccagaaa gcgatctaaa ttcatcttct tcatcgtctc taagcaacgc agaccaccga
      121 gttttccctt gcaactattg caggagaaaa ttctatagct cacaagcact tggtggccac
      181 caaaatgctc atagaataga aagaaactta gccaagaaga gccgtaactt gacttcagtc
      241 gttaccgctc attcagggta caaccggtct gtttctagtg gctcgagcca tggcagacaa
      301 gtgcagccac ctgtcgtaat ggcgcataac catcaagaac atgctggaag gttcagtggt
      361 agtgaaatgg gaagtgtgtt ggattatagt tataaaggtg agaatgttga tcaagaagac
      421 tttaaccagc ttgatttgtc tcttagacta tgattaacca acttttaact agtactatat
      481 gctttatatg tttaa
//
LOCUS       XM_071886372            2328 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like protease
            SBT3 (LOC139904441), mRNA.
ACCESSION   XM_071886372
VERSION     XM_071886372.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2328
                     /gene="LOC139904441"
                     /note="subtilisin-like protease SBT3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904441"
     CDS             1..2328
                     /gene="LOC139904441"
                     /codon_start=1
                     /product="subtilisin-like protease SBT3"
                     /protein_id="XP_071742473.1"
                     /db_xref="GeneID:139904441"
                     /translation="MANHISLYLWLLSLLVLSNSYITLITINAETYIVHMDLSAMPIS
                     FSNHHNWFSATLDSIAAITTTSTATSTTATSSKLVYTYTNEINGFTAVLSPYELEMVK
                     NSPGYLSSIKDTTVQLDTTHSTQFLGLNSNSGAWPVCKYGRDVIIGLVDTGIWPESES
                     FNDDGMTRIPSKWKGKCETGFQFNSSLCNKKLIGARYFNKGLLANHPSLTLSMNSARD
                     TDGHGTHTSSTAAGGYVKSASYFGYGYGTANGVAPNARVAIYKAVWEEGVFMSDIVAA
                     IDQAIADGVDVISLSLGADGLPLYEDPIAIATFSAVEKGIFVSASAGNSGPYLRSLHN
                     GTPWVLTVAASTIDREFTGTLSLGNGVSVRGFALYPGNSSSMHVPLVFVEDCENDLDA
                     NKVDQKIVVCLDKNDTLSEQFYNVQSSNVSGAVFITNNTDLEFFMQSSYPVLLLDLRT
                     GEIVVDYVQKLKGGEPKASIKFHGTRVGTEPAPRVSSYSSRGPSFSVPNVLKPDLTAP
                     GSLILASWPDRISPASIRIDDSTSPEPLFTKFNLLSGTSMSCPHASGVAALIKAAHPD
                     WTPSSIRSAMMTTSDIVDNTFKPIRDIADDNNPATPFAMGSGHVSPNKALNPGLIYDL
                     NPQKDYVNLLCGLNYTNVQIQTITRLSTINCKNSSLDINYPSFIAYFNGNETNSVKVI
                     REFKRTVTYVGTGSSTFTSKLTPVRGFNVSVSPGKLSFRSKNEKKSYTLRIEGPNSMK
                     DEAIFGFLSWIDSKGKFLVRSPIVATSLTNSVDIS"
     misc_feature    91..357
                     /gene="LOC139904441"
                     /note="Peptidase inhibitor I9; Region: Inhibitor_I9;
                     pfam05922"
                     /db_xref="CDD:428674"
     misc_feature    346..1743
                     /gene="LOC139904441"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; Region: Peptidases_S8_3; cd04852"
                     /db_xref="CDD:173795"
     misc_feature    order(451..453,664..666,817..819,874..876,970..972,
                     1639..1641)
                     /gene="LOC139904441"
                     /note="active site"
                     /db_xref="CDD:173795"
     misc_feature    order(451..453,664..666,1639..1641)
                     /gene="LOC139904441"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     misc_feature    1060..1410
                     /gene="LOC139904441"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     Region: PA_subtilisin_like; cd02120"
                     /db_xref="CDD:239035"
     misc_feature    1300..1308
                     /gene="LOC139904441"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]; other site"
                     /db_xref="CDD:239035"
     misc_feature    1981..2292
                     /gene="LOC139904441"
                     /note="Fibronectin type-III domain; Region: fn3_6;
                     pfam17766"
                     /db_xref="CDD:465493"
ORIGIN      
        1 atggctaacc atatctcttt gtatctatgg ctactctcac ttcttgtttt atcaaattct
       61 tacataactc taataaccat caatgctgaa acttatatag tccatatgga cttatccgct
      121 atgcccatat cattttcaaa tcaccataat tggttctccg ccaccttgga ctcaatcgcc
      181 gccatcacca ccaccagtac agccaccagc accaccgcca cttcttcgaa acttgtgtat
      241 acttacacaa atgaaatcaa tgggttcaca gcagttcttt ctccatacga gctcgaaatg
      301 gttaagaact cgccgggcta tctttcgtcc attaaagaca caacggttca actcgacaca
      361 acccattcaa ctcaatttct tggattgaac tccaactcgg gcgcatggcc cgtttgtaag
      421 tatggaagag atgttataat tgggctggtg gacaccggaa tttggcccga aagtgaaagt
      481 ttcaacgatg atggaatgac tcgaattcct tctaaatgga aaggcaaatg tgaaactgga
      541 ttccaattca attcaagttt atgcaacaag aaactcattg gcgctcgata ttttaacaaa
      601 gggttactcg caaaccaccc gagtttaact ctttctatga attcggctcg tgatacagac
      661 gggcatggga cgcatacgtc atcaactgct gcaggaggtt acgttaaaag tgcatcatat
      721 ttcgggtacg gttatgggac ggccaatggg gttgcaccaa atgcacgtgt cgcaatctat
      781 aaagcggttt gggaagaagg ggttttcatg tctgacatag ttgccgcaat tgatcaagca
      841 attgcggacg gtgttgatgt gatttcgttg tcacttggtg ctgatggatt acccttatac
      901 gaagacccta tcgcgattgc tacattttca gctgtcgaaa agggtatttt tgtgtctgca
      961 tcagcaggaa acagtgggcc ttatttaaga tcacttcaca atggtacacc atgggttctc
     1021 acggttgctg cgagtacaat tgatcgcgaa tttacgggga cattaagtct tggaaatgga
     1081 gtttcggtta ggggtttcgc tctttatcct ggaaactcga gttcaatgca tgtgccgttg
     1141 gtgtttgttg aagattgcga aaatgatttg gatgctaata aagttgatca aaagattgtt
     1201 gtgtgtcttg acaaaaacga cacgcttagt gaacagtttt acaatgttca gagttcgaat
     1261 gtctcggggg cggtttttat tacgaataac actgatctcg aattcttcat gcaaagtagc
     1321 tatccggttt tgttgctgga tctacgaacg ggcgaaatcg tcgtagatta tgttcaaaag
     1381 ctcaaaggtg gtgaaccgaa agcgagtatt aagtttcacg gcacgcgtgt gggaactgag
     1441 cctgcaccaa gggtgtctag ctatagctca cggggtccgt cttttagtgt tcctaatgtc
     1501 ttaaagccgg acctcacggc tcctggttca cttatactag catcatggcc tgatagaatc
     1561 tcaccagctt ctatcaggat agatgatagt actagtcccg aaccactttt taccaaattt
     1621 aaccttttat cgggcacgtc aatgtcgtgc cctcatgcaa gtggtgtggc cgctttaatt
     1681 aaagcggctc accctgactg gaccccatct tccattcggt ccgccatgat gaccacatcg
     1741 gacattgttg acaacacttt taaacctatt cgtgatatcg cggacgacaa caatcccgca
     1801 actccttttg ccatgggttc gggccatgtt tcaccaaaca aggcgttgaa cccgggactt
     1861 atatatgacc tgaaccctca aaaagattat gttaatcttc tttgtgggtt aaactacaca
     1921 aatgttcaaa tccaaacaat cacaagatta tcaaccatca attgtaaaaa ctcatctttg
     1981 gacataaact acccttcttt cattgcatat tttaatggta acgaaacgaa ctcggttaaa
     2041 gttatccgag aatttaaacg aacggtaact tatgttggca ccggaagctc aactttcacg
     2101 tcaaaactaa cgcctgttcg tggattcaac gttagtgtgt cgccaggaaa actgagtttc
     2161 cgatcaaaga atgaaaagaa aagctacaca ttaagaatag aaggaccaaa tagcatgaaa
     2221 gatgaagcaa ttttcggttt tttgagttgg atagacagta aagggaagtt tttagtaaga
     2281 agtcctattg ttgctacaag cctaacaaac tctgtagata tatcctaa
//
LOCUS       XR_011778800             805 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904442), ncRNA.
ACCESSION   XR_011778800
VERSION     XR_011778800.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..805
                     /gene="LOC139904442"
                     /note="uncharacterized LOC139904442; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904442"
     ncRNA           1..805
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904442"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904442"
ORIGIN      
        1 ttatgacaat ttttaaacta actttacgtc ataccttccc aatattagcc acaacaactg
       61 caccatgctt tgtaaattca gcaactttag atttcagatc ctcttcaaag ttggatttca
      121 tttacttggc attgtttgga ttgttggcta aattgcaaaa tacgaatcac tattttgaac
      181 agattatgat tgtatgtctc atttggttgc aagtatgcca actaatttgt agtcttcaga
      241 atcagaacta ccatgcgcat aaatgatact ggtacttagc agaatttttg catggttaaa
      301 tgcgagagca gtgtgttgat ccttttgatg tttcgtccga ggtgtgtgat ctgaacaaac
      361 attcgcgttt atagtcaaga agactgatat taacgtcgaa aaacgattac aatgtttaca
      421 atgtaataga tgccactgac gaaattgaag tcatgattga gattaatatt aagctcattc
      481 attaggaacc tacaattaac atggaagatt atgtatatgg gtaccaaaca ccaaagcttt
      541 acaagctgaa aagtctcgta ccacctgaga ttgttgataa tgagacctcg ataggaggaa
      601 catcggctgg gattggggct ctcagaatac tcaagatgga tcatttgtca tttggtgctg
      661 accttattcc cgaggagcgg aatcatttag gtttttgttt taagatttaa attatgataa
      721 agtggtcggt cattgtcttt gactcgattc atgattgtta gacattgttc acattttgag
      781 tgtttgtttg gtttcattgt ccaaa
//
LOCUS       XM_071886373             976 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904443), mRNA.
ACCESSION   XM_071886373
VERSION     XM_071886373.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..976
                     /gene="LOC139904443"
                     /note="uncharacterized LOC139904443; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904443"
     CDS             93..914
                     /gene="LOC139904443"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742474.1"
                     /db_xref="GeneID:139904443"
                     /translation="MEEDEAGDLLEDSWFFGNLLNTKPRTISRCYSDLASNSCPYPNP
                     SLSSNQDHVINNERKYSSFSSMKQPLVAPISLTRSPSMPASIETQSLLMEKPKIPLKL
                     KSSNFSSRKQPPVAPSSLTRTPSLPNSKETQYFSIKKTNPSPNWTPTSSMSTSIDESD
                     QEDEEDQESEFSLGRLIRQASMNHSHTTNPHRHTPKPMTENVQKKPVVDQEKISSDMR
                     KMERNMRSKRTKSKGGSGAPLIPEGLGNKNSSEDMKAHIKFWARAVASNVRQECS"
ORIGIN      
        1 accttcttca ttcacagctt aacttagtcc accttcataa cagatatttt cattcaacat
       61 aaaaattcat caagtttgtg tcttttttaa gtatggaaga agatgaagct ggagatctat
      121 tggaagacag ttggtttttc ggtaatttgc ttaacacgaa accaagaact atctctagat
      181 gttattcgga tcttgcttct aattcttgtc cttatcctaa cccttccttg tcctcaaatc
      241 aagaccatgt tatcaataat gagcgaaaat attcgagctt ttcttcaatg aagcaacccc
      301 ttgttgctcc tataagtcta actcgatcac catctatgcc agcatcaata gaaacacaat
      361 ccttattaat ggaaaagccc aaaatacctc ttaagctaaa aagttcaaat ttttcttcaa
      421 gaaagcaacc gcccgttgct ccatcaagtc taactcgaac accatctttg cccaattcaa
      481 aagaaacaca atacttctcc ataaaaaaga caaacccaag tccaaattgg accccgactt
      541 cgtccatgtc aacctccata gatgaaagtg atcaagaaga tgaagaagat caagaaagtg
      601 agtttagttt aggtagattg ataagacaag catccatgaa ccattcacac acaacgaatc
      661 cacatcgaca tacacctaag ccaatgacag aaaatgtaca gaagaagcct gtggttgatc
      721 aagaaaagat tagtagtgat atgagaaaga tggaaagaaa catgagaagc aaaagaacaa
      781 agagtaaagg tggtagtggt gctcctttaa ttccagaagg attgggtaat aagaattcat
      841 cagaagatat gaaggcacat atcaagttct gggctagagc tgtggcttct aatgtgcgcc
      901 aggagtgttc atgatcatga tagtaagctt tgtgaaatct gaataagttt ggaattagta
      961 agatatatgt atcata
//
LOCUS       XM_071886374             455 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein GL2-INTERACTING
            REPRESSOR 1-like (LOC139904444), mRNA.
ACCESSION   XM_071886374
VERSION     XM_071886374.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..455
                     /gene="LOC139904444"
                     /note="protein GL2-INTERACTING REPRESSOR 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904444"
     CDS             43..369
                     /gene="LOC139904444"
                     /codon_start=1
                     /product="protein GL2-INTERACTING REPRESSOR 1-like"
                     /protein_id="XP_071742475.1"
                     /db_xref="GeneID:139904444"
                     /translation="MSRTNKCGGPKLELKLNLSPTRCHRPITESTNQSTTLSPTSSCL
                     SSELLHDETGIRYSTSPEATSMMLVGCPRCLMYIMLAEDYPKCPKCKSTVLLDVFQDS
                     VKKTKN"
ORIGIN      
        1 atctcttgtg gaagagacat tcgaaagtgt caaatagaaa caatgagtcg aacgaacaag
       61 tgtggaggtc caaagcttga attaaagttg aacctatcgc cgacgagatg tcatagaccg
      121 ataactgagt caacaaatca gtcaactaca ctgtctccta caagctcttg tctatcatcg
      181 gagctccttc acgatgagac gggcattcga tactctacaa gtccagaggc cacgtctatg
      241 atgttggttg gttgtcctcg atgtctcatg tatattatgt tggccgagga ttatcctaag
      301 tgccctaaat gcaagagcac cgttttactt gacgtttttc aggacagcgt caagaaaact
      361 aaaaattagt taggttagaa taagtttgaa gatgttttta attaggaagt agtagcaaat
      421 taattatgtt tattttagtt ggtattgtct cattt
//
LOCUS       XM_071886375            2217 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like protease
            (LOC139904446), mRNA.
ACCESSION   XM_071886375
VERSION     XM_071886375.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2217
                     /gene="LOC139904446"
                     /note="subtilisin-like protease; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904446"
     CDS             1..2217
                     /gene="LOC139904446"
                     /codon_start=1
                     /product="subtilisin-like protease"
                     /protein_id="XP_071742476.1"
                     /db_xref="GeneID:139904446"
                     /translation="MEGKRSNLLLQVSLLLILSFINIFSNATKLETYIVTLDSPDGIN
                     FATSDDRQSWYESFLTATSTDSNVKPSILHAYHNVFTGFAADLSAEQVKAMENMEGFV
                     SARPERVYELHTTHTPNFLGLYQNLGVWKGSNYGIGTIIGLLDTGITIGHPSFDDEGV
                     PTPPKKWKGKCEVAGCNNKLIGARDFTRGSTRSPLDSGGHGTHTAGTAGGNFVHGASL
                     FGNAKGTAAGMAPHAHVAMYKVCADVGCSDSAILAAMDAAIEDGVDVLSLSLGGASLP
                     FYEDGIAVGAFSAIQRGIFVSCSAGNSGPYNSTLSNEAPWILTVGASTVDRDIRATVY
                     LGNKVLIDGESVYQPKDFTQDFLPLVYPGSNDQRASWCAKGSLDHFDVKGKIVLCDMG
                     GAISRIGKGQTVKDAGGAGMIITNSEIEGDGTFADANVLPASHISYKDGVSIKKYISS
                     NTKPVATILFRGTTIGVKTAPEVTYFSSRGPSRASPGIVKPDIIGPGVNILAAWPVSV
                     DNITTKATFNMISGTSMSCPHLAGISALLKSEHPDWSPAAIKSAIMTTADTVNLGGQP
                     IEDEREVPTYIYATGSGHVNPLKASDPGLIFDIKPDDYIPYLCGLGYTSKQVGVIVQK
                     KVRCLETIEESQLNYPSIVATLKAGEQKSYPRTVTNVGVAMSNYTIKAWSAPPGVIIQ
                     VGPQVLEFTKLGQTVSYEVVLTRDATTKVTNQYAEGVVTWGNGKYTVRTPYSVKYV"
     misc_feature    94..339
                     /gene="LOC139904446"
                     /note="Peptidase inhibitor I9; Region: Inhibitor_I9;
                     pfam05922"
                     /db_xref="CDD:428674"
     misc_feature    328..1674
                     /gene="LOC139904446"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; Region: Peptidases_S8_3; cd04852"
                     /db_xref="CDD:173795"
     misc_feature    order(433..435,598..600,751..753,808..810,904..906,
                     1570..1572)
                     /gene="LOC139904446"
                     /note="active site"
                     /db_xref="CDD:173795"
     misc_feature    order(433..435,598..600,1570..1572)
                     /gene="LOC139904446"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     misc_feature    994..1374
                     /gene="LOC139904446"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     Region: PA_subtilisin_like; cd02120"
                     /db_xref="CDD:239035"
     misc_feature    1264..1272
                     /gene="LOC139904446"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]; other site"
                     /db_xref="CDD:239035"
     misc_feature    1906..2205
                     /gene="LOC139904446"
                     /note="Fibronectin type-III domain; Region: fn3_6;
                     pfam17766"
                     /db_xref="CDD:465493"
ORIGIN      
        1 atggagggaa aaagatcaaa tcttttacta caagtttctt tattgttgat tctttctttc
       61 ataaacatat ttagcaatgc aaccaaactg gaaacctaca ttgtcacctt agactctcct
      121 gatggtataa actttgctac atcagatgac cgacaaagtt ggtacgagtc ctttttaaca
      181 gcaaccagca ctgactcaaa tgtgaaaccg agcatacttc atgcatacca taatgtgttt
      241 accgggtttg cagccgactt atcagcagaa caagtaaaag caatggaaaa catggaagga
      301 tttgtatctg caagacccga aagagtgtac gagttacaca caacgcatac acccaatttt
      361 ctggggttgt accaaaattt aggagtatgg aaaggatcaa attacggaat tggaaccata
      421 atcgggctgt tagacaccgg gattacgatc gggcatccgt cttttgatga tgaaggtgtc
      481 ccgaccccac cgaaaaaatg gaaagggaaa tgtgaagttg cagggtgtaa taataaactg
      541 attggtgcta gagattttac tcgtggtagt actcgctcgc cgcttgattc aggtggacat
      601 gggacccaca cggctggtac agctggcggg aatttcgtac atggcgcgag tttatttggt
      661 aacgcgaaag gtactgctgc tgggatggcc ccacatgcac atgtggcgat gtataaagtg
      721 tgtgctgacg ttgggtgttc ggatagtgcg attttagctg ccatggatgc agccattgaa
      781 gatggggtag acgttttgtc gctatcgcta ggtggagctt cgttaccgtt ttatgaagat
      841 gggatcgcgg ttggtgcgtt tagtgctatt caaagaggga tttttgttag ttgttcggcg
      901 ggtaattctg gaccgtacaa ttcaacgttg tcaaacgaag ctccatggat tcttacggtg
      961 ggtgctagta cagtagatcg agacatcaga gctactgttt atcttggaaa caaggtcttg
     1021 attgatggtg aatcggtgta tcaaccgaaa gattttactc aggacttttt gcctcttgtt
     1081 tacccggggt caaacgatca acgagcatca tggtgtgcaa aaggatcgtt agaccatttt
     1141 gacgttaaag gaaagatagt attgtgcgat atgggcgggg cgatttcaag aatcggtaaa
     1201 ggtcaaactg taaaagatgc tggtggggcc ggtatgatta ttacaaacag tgaaatcgaa
     1261 ggggatggta catttgcaga cgcgaatgtt cttcctgcat cacacattag ttataaagac
     1321 ggcgtctcaa ttaagaaata catcagttca aacacaaaac ctgttgctac gattttattt
     1381 cggggaacaa ccattggcgt aaaaacagcg cccgaggtga cgtacttctc gtcccgagga
     1441 ccgagcaggg caagcccggg aattgttaag cctgacatca tcgggcctgg ggttaacatt
     1501 cttgctgctt ggccggtttc tgttgataac ataacaacga aagcgacatt taacatgatt
     1561 tcgggaacat caatgtcatg tcctcatctt gcgggtatat cagcgttatt gaaaagcgaa
     1621 catcctgatt ggtcgccagc agccattaag tctgcaatta tgaccactgc tgatacggtc
     1681 aacttgggtg gtcaacccat cgaggacgaa cgagaggtcc cgacgtatat ttatgcgacg
     1741 ggttcgggtc atgttaaccc gttaaaagcg tcagacccgg gacttatttt tgacattaaa
     1801 cctgatgact acatacctta cttgtgcggt ttaggatata caagcaaaca agttggagtc
     1861 attgttcaga aaaaggttcg gtgcttagaa actatagagg aatcgcaatt gaactatcct
     1921 tcgattgtgg ctactttaaa agctggtgaa caaaaatcgt acccgaggac agtgactaat
     1981 gttggagtag ctatgtcgaa ttacaccata aaagcttggt ctgctccacc tggtgtgatt
     2041 atacaagttg gtccacaggt gctagagttc acaaaattgg gtcaaacggt gtcatacgaa
     2101 gttgtactaa ctcgagatgc tacgactaag gtgacaaatc aatatgcaga aggagttgtt
     2161 acatggggta atggtaaata cacggttcga actccatact ccgtcaagta tgtctga
//
LOCUS       XM_071886376             693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904447), mRNA.
ACCESSION   XM_071886376
VERSION     XM_071886376.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..693
                     /gene="LOC139904447"
                     /note="uncharacterized LOC139904447; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904447"
     CDS             77..550
                     /gene="LOC139904447"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742477.1"
                     /db_xref="GeneID:139904447"
                     /translation="MAKRTLLMRGIDLLICSRTTTSFSPNPNYKKTSLFSVNSHFINF
                     INNNTNINSYTSKSRNHKPNYSENQIQNQNPVELEPEEEEDVTSAKLKTQIDKFYQGD
                     IDAIPTIFESILKRKLAGKHDESDDELMNEFRQGQPSEVGDEESDSLTSSDSDSD"
ORIGIN      
        1 ccttcgaaga aaaacccaaa accctttgta tgcacgtccc tttgagtcga atcgaattga
       61 tatgagcaga cattaaatgg cgaagagaac tttgttaatg cgaggtatcg atcttctaat
      121 ctgctccaga acaacaactt cattttcacc aaaccctaat tacaaaaaaa cctcattgtt
      181 ctctgttaat tcccatttca ttaatttcat taacaataat accaatatta attcttatac
      241 atctaaatct cgaaatcata aacctaatta ttctgaaaac caaatccaga atcagaatcc
      301 cgtcgagctg gaaccagaag aagaagaaga tgtcaccagt gcaaagctta aaacacaaat
      361 agacaagttc tatcagggtg atattgacgc aataccaacc attttcgaat caatattgaa
      421 aaggaagtta gctgggaagc atgatgagtc agacgatgag ttgatgaatg aatttcgaca
      481 gggccagcca agtgaagttg gtgatgaaga gtctgattcg cttacaagtt cagactctga
      541 ttctgattag gcaagagaat ggtatgttag cttgctgcat acaactaata gcttgctata
      601 tttatcattt gttacatgtt agctttcaac attcttaaac gggtatgcat attttatgtt
      661 aagtttttgt ttccttgagt agagaatatt aaa
//
LOCUS       XR_011778801             508 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904448), ncRNA.
ACCESSION   XR_011778801
VERSION     XR_011778801.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..508
                     /gene="LOC139904448"
                     /note="uncharacterized LOC139904448; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904448"
     ncRNA           1..508
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904448"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904448"
ORIGIN      
        1 atccacttca gggtgattag gacacctcaa cttgtagaat atggatgttt aggagcttat
       61 cggagtagca catgagaagc ttattttaaa atggataaat ttcaccttaa gaaatttgag
      121 tacaagaagc tagttctcca gtaacaaatt tgtgaatgga tcctgaaggt ggaaaggcat
      181 ttgataaaaa tggtgcatca atttgtgtac aatgagtttc gtccccagtc aaggaaagaa
      241 acaaaaagta gaattgaaga ttcacaaact tgttacggtt ggtaagggtg gcctagttac
      301 tgtttcgatt tcttgtgatg aattttcttt atttagaaag gagataaatg atacagctga
      361 aaggtgacat atttttttga tcaggtacaa gggaaactcg ttcaggtgtg ttggaagcgg
      421 agttgaggca tttttggcac ttggggttat ttatctcgta gttagttttg gttatatttg
      481 atatttaaac acacttatcg gattatga
//
LOCUS       XR_011778802             518 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904449), ncRNA.
ACCESSION   XR_011778802
VERSION     XR_011778802.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..518
                     /gene="LOC139904449"
                     /note="uncharacterized LOC139904449; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904449"
     ncRNA           1..518
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904449"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904449"
ORIGIN      
        1 ttcttctaaa tcattgtaac acactgcagt tatctattca aatatgaact ctatttcatc
       61 aaaaagtcga tctgattctg ctggaggttg tgaacaattt gatcaacaac tggttctttg
      121 gttggacgtg gtggcttgaa atttgtgtat gagatcgtac aagtgtgcat tggttggttt
      181 tcttggggtt ggtggtctac catgtgagat acgtaaatgg cttacagtga aagtcgttgt
      241 taccgattca attataatga gtatgatgtc gatgggatta gcgtatgtac ggactacaca
      301 tatatgagtc ggtggattat acacaaagta catggcttaa agattaagat agaataattt
      361 cagatctggt ggttggtcct ggcggtttga aacatttgcg gagttcggtg tggtgtttct
      421 atgatttgca ttagggctgg aattttctat cacctggggt acataaattt gaagaattcg
      481 tatgccaaac tgacaaggat aaagccacta attatttt
//
LOCUS       XM_071886377            2492 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides long-chain-alcohol oxidase
            FAO2 (LOC139904450), mRNA.
ACCESSION   XM_071886377
VERSION     XM_071886377.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2492
                     /gene="LOC139904450"
                     /note="long-chain-alcohol oxidase FAO2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139904450"
     CDS             9..2261
                     /gene="LOC139904450"
                     /codon_start=1
                     /product="long-chain-alcohol oxidase FAO2"
                     /protein_id="XP_071742478.1"
                     /db_xref="GeneID:139904450"
                     /translation="MAEERMNNHHQHHHHPLLSGRPRTRDQKYTHGFSSSQIQSLAAI
                     CHTFIPPIHPPSNINTNKSLDDFYAASGSQAPVPQEVAERMVKRYPSDAVFLLKLVLM
                     LLSTKLGTLLICGSACFDTKWPFIHSFSDLSLNKRERILQKWSNSQSSFLPLRLVFMM
                     IKLMCFFIFFTMTDENSNNPYWEAIGYHVGVEPPKELRKERPLDKGVIETENESDATF
                     MPSVKSKGLEVEYGENGFYSIKCDVVIVGSGCGGGVAAANLAGAGYKVVVIEKGHYYV
                     PEDYSLLEGPSMNELYDKGGIQSTLDGKITILSGSTVGGGSAINWAASIKTPDDVLRD
                     WSVDKKIPMFGTDDYRTAMDVVCKRISVTYKCKEEGFQNKVLRRGCESLRLKVDVIPQ
                     NASENHFCGSCCYGCKTGDKKGTDSTWLVDAVGNSAVIFTGCKAERLVFDKEHSRKRC
                     RGVIATAESSTVTRKIQFEARVTVAAGGSLSTPPLLVSSGLTNRHIGRNLHLHPVLLA
                     WGYFPPVSDEIKGKCYEGGIITSLHKVMSAREQLNNVRAIIEVASMGPASFATLFPWV
                     SGADMKDKMTKYPRIVKLFSLVRDSSSGDIREEGKISYRFNKSDKENLKYGLQQALKI
                     LVSAGAEEVGTFRNDGQRIKCQGIKSSDLDEFLDSVEAIGGPKSRGEYWTNYCSAHQM
                     GSCRMGCNEDEGGVDVNGESWEAKGLFVCDGSVLPTAVGVNPMITIESTAYCISKKLG
                     QALNEGMFSD"
     misc_feature    726..2192
                     /gene="LOC139904450"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; Region: BetA; COG2303"
                     /db_xref="CDD:441878"
     misc_feature    870..1523
                     /gene="LOC139904450"
                     /note="GMC oxidoreductase; Region: GMC_oxred_N; pfam00732"
                     /db_xref="CDD:366272"
ORIGIN      
        1 ctctatcaat ggcagaagag agaatgaaca accaccacca acaccatcat catccgttgt
       61 taagtggacg accaagaaca agagaccaaa agtacaccca tggtttctca tcttcccaga
      121 tccaatcatt agctgccatc tgtcatactt ttattcctcc tattcatcca ccttcaaaca
      181 tcaacactaa taaatctctt gacgactttt atgctgcttc tggatctcaa gctcctgttc
      241 ctcaagaggt tgcagagaga atggtaaaga gatacccatc agatgcagtg ttcttgctga
      301 aattggttct aatgttactc tccaccaaat tgggaaccct tttgatctgt gggtcagctt
      361 gttttgacac caaatggcca tttattcaca gtttttctga tttaagttta aacaaaagag
      421 agagaattct tcaaaaatgg tccaattcac aatcttcttt ccttcctcta agacttgtgt
      481 tcatgatgat caaactcatg tgcttcttca tcttcttcac tatgactgat gaaaattcaa
      541 ataacccgta ttgggaagca atcgggtacc atgttggtgt cgaacctcca aaagagctac
      601 gaaaagagag accgctcgat aagggtgtta tagaaacaga aaacgaaagt gatgcaacgt
      661 tcatgccgtc ggtgaagagc aaaggtcttg aagttgaata tggcgagaac gggttttata
      721 gcatcaaatg tgacgttgta attgtggggt cgggttgtgg tggtggtgtt gcggcagcta
      781 atcttgctgg cgccggctat aaagtggtgg tgatcgaaaa aggtcattat tatgttcccg
      841 aggattattc tcttcttgaa ggtccatcga tgaatgagtt atatgataaa gggggtatac
      901 aatcaacttt agatgggaaa attacgatct tatcaggatc tacggttggt ggtggatctg
      961 cgataaattg ggctgcgtcg ataaagacac cggatgatgt tcttagagat tggtcggttg
     1021 ataaaaagat accgatgttt gggacagatg attatcgtac agcgatggat gttgtgtgta
     1081 agagaatcag tgttacgtac aaatgtaaag aagaagggtt tcagaacaaa gtactacgac
     1141 gagggtgtga gagtctcagg ttaaaggttg atgtgattcc tcaaaacgca tccgaaaatc
     1201 atttttgcgg ctcgtgttgt tatggttgta aaacgggaga caaaaaaggg accgactcta
     1261 cttggctcgt tgatgccgtt ggaaacagtg cggttatctt cactggttgc aaagcggaac
     1321 gactagtatt cgacaaagaa catagtcgaa aaagatgtcg aggtgtgatt gcgaccgcag
     1381 aaagtagtac cgtcactaga aagatccagt tcgaggctag agtgacggtt gctgccggtg
     1441 ggtccctctc aacaccgcca ctgttagttt ctagcggcct cacaaaccgc cacattggcc
     1501 ggaatctaca ccttcatcct gttttattag catggggata tttcccgcca gtttcagatg
     1561 aaattaaagg gaaatgttac gagggaggaa tcattacctc ccttcataaa gtcatgtcag
     1621 ccagagaaca actgaataac gttcgtgcga tcatagaagt tgcctctatg ggacccgcat
     1681 cgttcgctac attgtttcct tgggtgtcgg gcgccgacat gaaggacaaa atgacgaaat
     1741 acccgagaat cgtgaagctt ttctcgttag taagagattc aagctctggc gacatacggg
     1801 aggaaggtaa gataagttac cgatttaaca aaagcgacaa agaaaatcta aaatacggtt
     1861 tacaacaagc gcttaaaatt ctcgtttctg ccggagccga agaagtaggg acgtttcgaa
     1921 acgatgggca aagaataaaa tgtcaaggca ttaaaagttc tgatttggat gagtttcttg
     1981 actcggtcga agctatcggg gggccgaaat ctcgaggaga atattggacg aactattgct
     2041 cggcacatca aatggggagt tgtagaatgg gatgtaatga agatgaaggt ggagtagatg
     2101 taaatggaga aagttgggaa gctaaaggct tatttgtttg cgatggcagc gtactgccaa
     2161 ctgctgtcgg tgtaaatccg atgatcacta tagaatcgac tgcgtattgc atatcgaaga
     2221 aactgggcca ggcacttaat gaaggaatgt tttctgatta atccgagatt gcaagtttgc
     2281 gaaatggctg atgtcaccat ctggttaata atgtatttaa ctgtaaagcg aataagaccc
     2341 gatatataaa taaagaattt acatacatag ctcggattag gagctttata tagacttcta
     2401 ccaaatatga tataaccaag gttgcaaaac tagctactcg ggaagtactc ggtcgggact
     2461 ttggaaggag taatcggcta attaattgga gt
//
LOCUS       XR_011778803             430 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904451), ncRNA.
ACCESSION   XR_011778803
VERSION     XR_011778803.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..430
                     /gene="LOC139904451"
                     /note="uncharacterized LOC139904451; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904451"
     ncRNA           1..430
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904451"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904451"
ORIGIN      
        1 ttaacataca agttgctact aactttatat ttatgattat ttttgagtat tttgtttaag
       61 tatatatgtg tgtttttttg tcatatatca ggtgtcttac gagaaacctg gctgttagtt
      121 catatcccgt taattaactg atacccaagg agaaactaaa atcgtatctt ggcaatctag
      181 ttggtggttc ttgaggatgt aaatcattga acatagcatc tcaattgatg tcaagcctat
      241 gagcaaatgg atgcaacagt tcctcctttt ttagcatttg caatctcaat tttagatgcc
      301 tctttagtag ttttaatgtg atattataga tagaagacaa ctaacagatg attgtatatg
      361 aataagatgt tatggttgta gcagtagttt ctatcctttg aacataattg acactgtata
      421 gcagtatgca
//
LOCUS       XM_071886378            1285 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904452), mRNA.
ACCESSION   XM_071886378
VERSION     XM_071886378.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1285
                     /gene="LOC139904452"
                     /note="uncharacterized LOC139904452; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904452"
     CDS             199..900
                     /gene="LOC139904452"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742479.1"
                     /db_xref="GeneID:139904452"
                     /translation="MALLKYGRQMVTGLSRTQQHLRFGRLLTTRSTHHSSSEFVKSPD
                     DDDIHDELKYGRRIIGLPFYEYPRVGFFTRLFNKDSTPPLPAPGTAADLLGKIMDLAE
                     LIKSSPEEKTRVDQICHLLKEMLGRVTHETTVKLLYELARLAASPSSPPPAVIDSKVK
                     EFIDNLPTKIVPLFEDMTIDMLEDRYWRLLDKDISCSSRPQTVTINADVSHLRNQRIK
                     VFVAGDMVMVTGSDK"
ORIGIN      
        1 ggtgggtccg gtccgatccg gtcgggtact cgggtaagaa gaaaacttgt gggaaaagaa
       61 aaccacgaaa ccctaacttt ttgggggttt ttaaaaggta tatacgagtc tgtgtacgtg
      121 tttatccaga gaaagagcga gtgttattat aatagtttaa atttaaagaa gatactagaa
      181 gaagaagaag aagaaaagat ggcattgttg aagtatggaa gacaaatggt caccggattg
      241 tcaagaactc aacaacattt acgatttggg cgattgttaa cgacaagaag cactcatcat
      301 tcttcatcgg agtttgttaa aagtccagac gacgacgata ttcacgacga gctgaaatat
      361 ggtagaagaa tcatcgggtt gccgttttac gagtatccaa gagttggttt ctttaccaga
      421 ttgttcaaca aggattccac tcctcctctt cctgcacctg gcactgcagc agatttgctt
      481 ggaaagatta tggacctggc tgaattaatc aaatcatctc cagaagaaaa gactcgtgtt
      541 gatcaaattt gccacctttt gaaggaaatg cttggtagag tgacacatga gaccacggtt
      601 aagcttttgt atgaactcgc tagactagca gcttcaccgt catctcctcc tccggctgtt
      661 attgatagca aagttaaaga gttcattgat aatctcccaa ctaagatcgt ccctttattt
      721 gaagatatga cgattgacat gcttgaggat cgatattggc gcctgcttga taaggacatc
      781 agttgcagtt cacgtcctca aacggtgact attaatgctg acgtgtctca tctccgtaat
      841 caaagaatca aggtttttgt tgctggagat atggtgatgg taacggggtc agataaataa
      901 tccggttttc ccaattttct aagacaatgc cctaagcata tggttaaatt gccacggttt
      961 ccttacgttc atcatgacgt cactgcttac atcacacgag gcaaactcaa ggttgatttt
     1021 cctcgtcttg ctgattcaga ggtggtgaac gtacccaggg tttaccaagt tgatctcgat
     1081 tatgatgccc cctatcagac aagctacaaa aaacgtgact ctcttgtgga atggttgcac
     1141 agtgtaagag agggcgtgaa ggtggaagaa acttggtagt agtagtagtc tatcttgtag
     1201 taacatgaaa tatttttgaa gattctcatt ttgattacag cttattttgc taaatatcat
     1261 gtaatctgac cgctaattta ggaca
//
LOCUS       XR_011778804             680 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904453), ncRNA.
ACCESSION   XR_011778804
VERSION     XR_011778804.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..680
                     /gene="LOC139904453"
                     /note="uncharacterized LOC139904453; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904453"
     ncRNA           1..680
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904453"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904453"
ORIGIN      
        1 ggaaaacaaa atcaaacaac agtctcttgt gcacccatag tgtctccctc acctcctccc
       61 ttaccttctc cgttaccttc ttcctctaat atcttctttc cctactttct tcttttcatt
      121 tatcacatcc aagttcatca tgctttgaat ttgactcaaa aggtagcgta ctgaaacttc
      181 catgtcttcc accatacttt cgggaccgta tgaccttcac caacagctcc tccacgtctt
      241 cagaccatct ctagcttcaa ttcattttct tcaacttatc accttctgtt ctccagttta
      301 tataccaaaa caatcatcca tatgcatctg atttcttcca ttttttgatt tccaaagttt
      361 tttcagatgt tgttgcagct ctccaactgc atttatgacc gaggctcaca tgttttcgcc
      421 gatgaaggta atttgctccg cagccttggg taagtgtata aagattggta aggaggcgga
      481 ggtgaggatc atgatatgcc gcacatggga tacccacaca tcgtatggga aatacctgag
      541 cactgagttt attgctactg atgagaagga atctaattgc cgaaaccggt attcagccac
      601 ggacaactat acgtcgcgct atcaagagtc acaaatcctg gtggtcttaa aatagtcatg
      661 atcagtgaaa atgaagggag
//
LOCUS       XM_071886379            2865 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides plasma membrane ATPase-like
            (LOC139904454), transcript variant X1, mRNA.
ACCESSION   XM_071886379
VERSION     XM_071886379.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2865
                     /gene="LOC139904454"
                     /note="plasma membrane ATPase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 69
                     Proteins"
                     /db_xref="GeneID:139904454"
     CDS             1..2865
                     /gene="LOC139904454"
                     /codon_start=1
                     /product="plasma membrane ATPase-like isoform X1"
                     /protein_id="XP_071742480.1"
                     /db_xref="GeneID:139904454"
                     /translation="MAGSSSISWDDLTKENVDLETVPVEEVFETLKCTKGGLTTEEGN
                     NRLNIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFV
                     GITTLLIINSTISFIEENNAGNAAAALMAGLAPKTKVIRDGKWDEQDAAILVPGDVIS
                     VKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDSVYSGSTCKQGEIEAVVIA
                     TGVHTFFGKAAHLVDSTNQVGHFQKVLTSIGNFCICSIAVGLIIEIVVMYPIQKRTYR
                     NGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSEQGAITKRMTAIEEMAGMDVLCSD
                     KTGTLTLNKLTVDKTLIEVFIKDTDKDQVILLGARASRVENQDAIDACIVGMLPDPKE
                     ARAGVTEVHFLPFNPVDKRTAMTYIDQSGNWHRVSKGAPEQIVELCNLKTDDKNKVFS
                     IIDKFAERGLRSLAVCQQTVPEKTKESSGGPWEFVGLLPLFDPPRHDSAETIRRALHL
                     GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQNKDSAIADIPIEELIEKADGF
                     AGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIV
                     LTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVL
                     IIAILNDGTIMTISKDKVKPSPMPDSWKLKEIFATGVVLGTYLAVMTVIFFWLAKESD
                     FFTERFGVKSIRDSEYELMSALYLQVSIISQALIFVTRSRSWSFIERPGLLLLTAFFI
                     AQLIATTIAVYANWDFARVKGIGWGWAGVIWLYSIIFYFPLDIFKFIIRYALSGKAWD
                     NMLEKRTAFTSKKDYGRGEREAQWATDQRTLHGLQAPNANEILKDKNDYRELSELAEQ
                     AKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV"
     misc_feature    109..2427
                     /gene="LOC139904454"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     Region: ATPase-IIIA_H; TIGR01647"
                     /db_xref="CDD:273731"
ORIGIN      
        1 atggccggaa gctcgagtat cagctgggat gatctcacca aagagaatgt tgatcttgag
       61 actgttccag ttgaggaagt atttgaaacc ttgaaatgta caaaaggggg attgactact
      121 gaagaaggga ataacaggct caatatattt ggccctaaca agctagaaga gaaaaaggaa
      181 agcaagcttc taaagttctt agggttcatg tggaatccat tgtcatgggt catggaagct
      241 gctgcaatta tggctattgt cttggccaat ggagggggca agcctccaga ttggcaagat
      301 tttgttggaa tcacaacatt actaataatc aactcgacta ttagttttat cgaagaaaac
      361 aatgcaggaa acgctgcagc agctcttatg gcaggtcttg caccaaaaac aaaggtcata
      421 cgtgacggga aatgggatga acaagacgct gctattttgg tacctggtga tgttattagt
      481 gtcaaattgg gtgatattat cccagctgac gcacgtcttt tagaaggaga tcctcttaag
      541 attgatcaat ctgcattgac tggtgaatca ttacccgtga ccaagaatcc aggtgatagc
      601 gtttattcgg gctctacttg caaacaagga gagattgaag ctgttgttat cgctactggt
      661 gtccacacgt tctttggaaa ggctgctcat ttagtcgata gcacaaatca agtcggacat
      721 ttccaaaagg tgttgacatc cataggtaac ttctgcatat gctccatagc agtcgggcta
      781 attatcgaaa tagtggtgat gtacccaatt cagaaacgaa catatagaaa cggaatcgat
      841 aatttacttg ttctactcat tggaggtatc ccaattgcca tgccaacagt gttgtcagtg
      901 accatggcaa tcgggtccca caagttatcg gagcaaggtg ctatcactaa gagaatgaca
      961 gccattgaag aaatggcggg aatggatgtt ttgtgcagtg acaaaactgg taccctcacc
     1021 ttgaacaaac ttacagttga caaaactctc attgaggttt tcataaagga tactgataag
     1081 gatcaagtga ttctattggg agcaagggct tcaagagtgg agaatcaaga tgcaattgat
     1141 gcttgtattg taggaatgct tcctgatcct aaggaggcac gagcaggggt aactgaggtg
     1201 cattttctac cattcaatcc agtagacaaa cgaacggcaa tgacatacat tgatcaaagc
     1261 ggaaattggc atagagtcag caagggtgca cctgagcaga ttgtggagct atgcaaccta
     1321 aagactgatg acaagaataa ggtattttca atcatcgata aatttgctga acgtggtctt
     1381 cgttctttag ccgtttgcca gcaaacagta cctgagaaaa ctaaggagag ttctggaggc
     1441 ccgtgggagt ttgtaggttt attgccactt tttgacccgc caagacatga cagtgctgaa
     1501 actattcgac gggccctaca ccttggtgtc aacgtgaaaa tgatcaccgg tgatcagtta
     1561 gctattggaa aagaaacggg tcgcagactt ggaatgggta cgaatatgta cccatcttct
     1621 tcacttcttg gtcaaaacaa agattcggct attgcagaca tcccaattga agaactaatc
     1681 gaaaaggctg atggttttgc tggagttttc cctgaacata aatatgagat tgtgaggaaa
     1741 ctacaggagc gaaagcatat ttgtggaatg acaggagatg gtgtaaacga tgcaccagca
     1801 ttaaaacggg ccgatattgg tatagctgtt gctgatgcca ctgacgcagc tcgaggtgca
     1861 tcagatatcg tgttgactga accgggactt agtgtgattg taagcgcggt tttaaccagc
     1921 cgagctatct ttcaaaggat gaaaaactac accatttatg ctgtctcgat caccattcgt
     1981 atcgtgctcg ggttcatgct aattgctctt atttggaaat tcgatttctc gccttttatg
     2041 gttttgatca ttgcaattct taatgatgga accattatga caatatctaa agataaagtc
     2101 aaaccttcac ctatgcccga ttcatggaag ctaaaagaga tttttgctac tggggttgtt
     2161 cttggaactt atttagcagt tatgacagtt atttttttct ggttagcaaa agaatctgac
     2221 ttttttacgg aacgatttgg tgtgaaatcg atcagagact cagaatatga gctgatgtca
     2281 gctctttatc ttcaagttag tattatcagt caggcactca ttttcgttac acgatcaagg
     2341 agctggtcat tcattgaacg tcctggtctt ttactcctta ccgccttttt tatagctcag
     2401 ctgattgcta ccacgatcgc ggtctacgca aattgggatt tcgcaagagt gaaaggaatc
     2461 ggttggggtt gggctggtgt gatctggctc tatagcataa tcttctactt cccattagat
     2521 atcttcaaat tcatcatccg ttacgctttg agtggcaagg cttgggacaa tatgctcgaa
     2581 aaacggactg ctttcacctc caaaaaggac tatggacgcg gtgagagaga agcccaatgg
     2641 gccacggatc aacgtacgtt gcatggtctc caagcaccaa acgcaaacga aatcttgaaa
     2701 gacaagaatg actacagaga gttgtcagaa cttgcagaac aagcaaagag gcgtgctgag
     2761 gtggctaggc tgagggagct tcacactcta aaagggcatg ttgaatcggt agtgaagctt
     2821 aaaggcctcg atatcgaaac catccaacaa cactacacag tttag
//
LOCUS       XM_071886380            2796 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides plasma membrane ATPase-like
            (LOC139904454), transcript variant X2, mRNA.
ACCESSION   XM_071886380
VERSION     XM_071886380.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2796
                     /gene="LOC139904454"
                     /note="plasma membrane ATPase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139904454"
     CDS             139..2796
                     /gene="LOC139904454"
                     /codon_start=1
                     /product="plasma membrane ATPase-like isoform X2"
                     /protein_id="XP_071742481.1"
                     /db_xref="GeneID:139904454"
                     /translation="MWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGITTLLIINST
                     ISFIEENNAGNAAAALMAGLAPKTKVIRDGKWDEQDAAILVPGDVISVKLGDIIPADA
                     RLLEGDPLKIDQSALTGESLPVTKNPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAA
                     HLVDSTNQVGHFQKVLTSIGNFCICSIAVGLIIEIVVMYPIQKRTYRNGIDNLLVLLI
                     GGIPIAMPTVLSVTMAIGSHKLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT
                     VDKTLIEVFIKDTDKDQVILLGARASRVENQDAIDACIVGMLPDPKEARAGVTEVHFL
                     PFNPVDKRTAMTYIDQSGNWHRVSKGAPEQIVELCNLKTDDKNKVFSIIDKFAERGLR
                     SLAVCQQVIPEKTKESSGGPWEFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQ
                     LAIGKETGRRLGMGTNMYPSSSLLGQNKDSAIADIPIEELIEKADGFAGVFPEHKYEI
                     VRKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVS
                     AVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIM
                     TISKDKVKPSPMPDSWKLKEIFATGVVLGTYLAVMTVIFFWLAKESDFFTERFGVKSI
                     RDSEYELMSALYLQVSIISQALIFVTRSRSWSFIERPGLLLLTAFFIAQLIATTIAVY
                     ANWDFARVKGIGWGWAGVIWLYSIIFYFPLDIFKFIIRYALSGKAWDNMLEKRTAFTS
                     KKDYGRGEREAQWATDQRTLHGLQAPNANEILKDKNDYRELSELAEQAKRRAEVARLR
                     ELHTLKGHVESVVKLKGLDIETIQQHYTV"
     misc_feature    139..2358
                     /gene="LOC139904454"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     Region: ATPase-IIIA_H; TIGR01647"
                     /db_xref="CDD:273731"
ORIGIN      
        1 gttgaggaag tatttgaaac cttgaaatgt acaaaagggg gattgactac tgaagaaggg
       61 aataacaggc tcaatatatt tggccctaac aagctagaag agaaaaagga aagcaagctt
      121 ctaaagttct tagggttcat gtggaatcca ttgtcatggg tcatggaagc tgctgcaatt
      181 atggctattg tcttggccaa tggagggggc aagcctccag attggcaaga ttttgttgga
      241 atcacaacat tactaataat caactcgact attagtttta tcgaagaaaa caatgcagga
      301 aacgctgcag cagctcttat ggcaggtctt gcaccaaaaa caaaggtcat acgtgacggg
      361 aaatgggatg aacaagacgc tgctattttg gtacctggtg atgttattag tgtcaaattg
      421 ggtgatatta tcccagctga cgcacgtctt ttagaaggag atcctcttaa gattgatcaa
      481 tctgcattga ctggtgaatc attacccgtg accaagaatc caggtgatag cgtttattcg
      541 ggctctactt gcaaacaagg agagattgaa gctgttgtta tcgctactgg tgtccacacg
      601 ttctttggaa aggctgctca tttagtcgat agcacaaatc aagtcggaca tttccaaaag
      661 gtgttgacat ccataggtaa cttctgcata tgctccatag cagtcgggct aattatcgaa
      721 atagtggtga tgtacccaat tcagaaacga acatatagaa acggaatcga taatttactt
      781 gttctactca ttggaggtat cccaattgcc atgccaacag tgttgtcagt gaccatggca
      841 atcgggtccc acaagttatc ggagcaaggt gctatcacta agagaatgac agccattgaa
      901 gaaatggcgg gaatggatgt tttgtgcagt gacaaaactg gtaccctcac cttgaacaaa
      961 cttacagttg acaaaactct cattgaggtt ttcataaagg atactgataa ggatcaagtg
     1021 attctattgg gagcaagggc ttcaagagtg gagaatcaag atgcaattga tgcttgtatt
     1081 gtaggaatgc ttcctgatcc taaggaggca cgagcagggg taactgaggt gcattttcta
     1141 ccattcaatc cagtagacaa acgaacggca atgacataca ttgatcaaag cggaaattgg
     1201 catagagtca gcaagggtgc acctgagcag attgtggagc tatgcaacct aaagactgat
     1261 gacaagaata aggtattttc aatcatcgat aaatttgctg aacgtggtct tcgttcttta
     1321 gccgtttgcc agcaagtaat acctgagaaa actaaggaga gttctggagg cccgtgggag
     1381 tttgtaggtt tattgccact ttttgacccg ccaagacatg acagtgctga aactattcga
     1441 cgggccctac accttggtgt caacgtgaaa atgatcaccg gtgatcagtt agctattgga
     1501 aaagaaacgg gtcgcagact tggaatgggt acgaatatgt acccatcttc ttcacttctt
     1561 ggtcaaaaca aagattcggc tattgcagac atcccaattg aagaactaat cgaaaaggct
     1621 gatggttttg ctggagtttt ccctgaacat aaatatgaga ttgtgaggaa actacaggag
     1681 cgaaagcata tttgtggaat gacaggagat ggtgtaaacg atgcaccagc attaaaacgg
     1741 gccgatattg gtatagctgt tgctgatgcc actgacgcag ctcgaggtgc atcagatatc
     1801 gtgttgactg aaccgggact tagtgtgatt gtaagcgcgg ttttaaccag ccgagctatc
     1861 tttcaaagga tgaaaaacta caccatttat gctgtctcga tcaccattcg tatcgtgctc
     1921 gggttcatgc taattgctct tatttggaaa ttcgatttct cgccttttat ggttttgatc
     1981 attgcaattc ttaatgatgg aaccattatg acaatatcta aagataaagt caaaccttca
     2041 cctatgcccg attcatggaa gctaaaagag atttttgcta ctggggttgt tcttggaact
     2101 tatttagcag ttatgacagt tatttttttc tggttagcaa aagaatctga cttttttacg
     2161 gaacgatttg gtgtgaaatc gatcagagac tcagaatatg agctgatgtc agctctttat
     2221 cttcaagtta gtattatcag tcaggcactc attttcgtta cacgatcaag gagctggtca
     2281 ttcattgaac gtcctggtct tttactcctt accgcctttt ttatagctca gctgattgct
     2341 accacgatcg cggtctacgc aaattgggat ttcgcaagag tgaaaggaat cggttggggt
     2401 tgggctggtg tgatctggct ctatagcata atcttctact tcccattaga tatcttcaaa
     2461 ttcatcatcc gttacgcttt gagtggcaag gcttgggaca atatgctcga aaaacggact
     2521 gctttcacct ccaaaaagga ctatggacgc ggtgagagag aagcccaatg ggccacggat
     2581 caacgtacgt tgcatggtct ccaagcacca aacgcaaacg aaatcttgaa agacaagaat
     2641 gactacagag agttgtcaga acttgcagaa caagcaaaga ggcgtgctga ggtggctagg
     2701 ctgagggagc ttcacactct aaaagggcat gttgaatcgg tagtgaagct taaaggcctc
     2761 gatatcgaaa ccatccaaca acactacaca gtttag
//
LOCUS       XR_011778805             739 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904455), ncRNA.
ACCESSION   XR_011778805
VERSION     XR_011778805.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..739
                     /gene="LOC139904455"
                     /note="uncharacterized LOC139904455; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904455"
     ncRNA           1..739
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904455"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904455"
ORIGIN      
        1 aatcatcttg tattgactat gtgggtcggt tttttcccgc cttaattgaa cccaaatcat
       61 accaaaccct aactttaatt caactcaaac aattcaatct ccaatttcgc acactcttac
      121 ataaaaaatt caacatcgcc ataaacgaca tcgttttcaa tttcactcca aactctatcc
      181 tcttccctat cgccgtcacc tccatcggcg ccgtcgctga actcactcac gtaccaaatc
      241 gttgattcga aacataaatt catcatcacc gtcgaccagt tacgtttaaa aagtatttct
      301 ataataaaga agccacggag cagaccattg acaaacaaga ttggctgaac acaggtgaat
      361 ttggtttttt tttgatgata aaggacgaat atatgttgtg gatcaactgg aagagctcat
      421 aaagggtatc aggtagcact agcagaactt gaagggctgc taattactca ccctgaaatt
      481 attgatgctg cagtcgtcct acatgctgat gaggaagcag gtgaaattcc aatggcatat
      541 gttgtacgta aacctgggag ctcacttact ggtgacgagg tttatgattt tgtcgccaaa
      601 caggttgcac cgtttaagag aataagaaag gtagcatata ttaacgttat tccgaaatca
      661 gctgtaggaa agattttaag gagggaagtt aggcaaaaag gtcaatctaa actctaaagt
      721 ttacagtgtt ataattcat
//
LOCUS       XM_071886381            1150 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904456), mRNA.
ACCESSION   XM_071886381
VERSION     XM_071886381.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1150
                     /gene="LOC139904456"
                     /note="uncharacterized LOC139904456; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904456"
     CDS             68..1075
                     /gene="LOC139904456"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742482.1"
                     /db_xref="GeneID:139904456"
                     /translation="MCSSYRIRQDNEPFELQDYYDIYESLFTIKLHHGGVFSQPPGIE
                     FLNGRITFIDLVDYDTFSILDVYDIVQSLGCDGFKKMYYHYLRHGTVLDVGLCPLANA
                     SDVCNLRQYMVGCKEISIYLEYEQTQLLDGWANEPGVGTSNVDEAGNVDSDDEDYLVD
                     DNTVLDVDVDINQFHFNIDKDVEYMGNSSVVPTVTEEELVDVEIVNTNAFVSDPDSGD
                     EIERFRKKKIRELKEEVATSTVSNTYFYVEQEFGSKEEIKERVQLHAIETKRQLVFIK
                     NEGTRIRVGCVGTVDDKGQKIKRMIVVKVHKGLLEVLKKILKLNAKEKKRRIGERESW
                     T"
ORIGIN      
        1 ctcaaattaa acgacgaatg gctaaaccca tctgaatcaa aatcaaatct gaaatcaaaa
       61 tcaaagtatg tgttcatcgt acagaattcg tcaggataac gaaccattcg agctacagga
      121 ttattacgat atatatgaga gtctatttac cataaaatta catcatggtg gtgtatttag
      181 tcaacctcca ggtattgaat tcttgaatgg aagaattaca tttattgatc ttgttgatta
      241 tgatacgttt tcgatactgg atgtatatga tattgtgcaa agtttagggt gtgatggatt
      301 taaaaaaatg tattaccatt atctacgaca tggaactgtt ttggatgttg gtttatgtcc
      361 acttgctaac gcatcagatg tttgtaattt aagacaatat atggtgggat gtaaggaaat
      421 aagtatttac cttgaatatg agcaaacaca gttacttgat ggatgggcaa atgaacctgg
      481 tgttggaact agtaatgttg atgaggcagg aaatgttgac agtgatgatg aagattattt
      541 agttgatgat aatactgttt tagatgtgga tgttgacatc aatcaatttc attttaacat
      601 agacaaggat gttgagtaca tgggtaactc tagtgttgtg ccaacagtga ccgaagaaga
      661 gttggttgat gtggaaattg taaacacaaa tgcatttgta agtgatccag atagtgggga
      721 tgagattgag aggtttagaa agaaaaagat cagagaattg aaagaagagg ttgctacatc
      781 aactgtttct aacacttatt tctatgttga acaagagttt ggttcaaaag aagaaattaa
      841 ggaacgtgtg cagttgcatg caattgaaac taaaagacaa cttgtcttta ttaaaaatga
      901 aggtacaaga ataagggttg gatgtgtggg gacagttgat gataaaggac aaaaaataaa
      961 aagaatgatc gtggtcaaag ttcacaaggg gttgttggaa gtattaaaaa agatcctgaa
     1021 gttaaatgca aaggagaaaa aaagaagaat tggagagagg gaaagctgga cctagcttgt
     1081 ccatggagac tttatgccta tgagctatta aataaagaaa cttgacaggt gaagacattt
     1141 atagagaagc
//
LOCUS       XR_011778806             493 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904457), transcript variant X1, ncRNA.
ACCESSION   XR_011778806
VERSION     XR_011778806.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..493
                     /gene="LOC139904457"
                     /note="uncharacterized LOC139904457; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904457"
     ncRNA           1..493
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904457"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904457"
ORIGIN      
        1 tccgatctat ctgctacaaa ccctaataca tcaattgatt caacctgaca accgatggat
       61 atatattgca atcaatcaga tgcgatttgg tgggtttatg ttcgtgattt tggggtttgg
      121 aagacagatt agggtttaat gatttcatcg tttgccactt ttcataaatc ctttccgttt
      181 cttcgattgc ctattcatga cgtggatggg aatgtttcca gcgtgttggt cattgacaga
      241 gaataagttc ctctgtttat ttctttgtgc gtctggcgat tcgatttgta tatgtaggtt
      301 tttaacgcaa cctgctttga agcttttgat atctcgaaat caacggctaa cgagattgct
      361 gtaaattttt atcttacaaa gagatggcgt gttgcgaaaa agaatgctta cttgctgtaa
      421 acttggctct ttcagagtca catttggcag atatctcagt taatagtcaa cggttggaaa
      481 gcatttgagt taa
//
LOCUS       XR_011778807             443 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904457), transcript variant X2, ncRNA.
ACCESSION   XR_011778807
VERSION     XR_011778807.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..443
                     /gene="LOC139904457"
                     /note="uncharacterized LOC139904457; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904457"
     ncRNA           1..443
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904457"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904457"
ORIGIN      
        1 tccgatctat ctgctacaaa ccctaataca tcaattgatt caacctgaca accgatggat
       61 atatattgca atcaatcaga tgcgatttgg tgggtttatg ttcgtgattt tggggtttgg
      121 aagacagatt agggtttaat gatttcatcg tttgccactt ttcataaatc ctttccgttt
      181 cttcgattgc ctattcatga cgtggatggg aatgtttcca gcgtgttggt cattgacaga
      241 gaataaggtt tttaacgcaa cctgctttga agcttttgat atctcgaaat caacggctaa
      301 cgagattgct gtaaattttt atcttacaaa gagatggcgt gttgcgaaaa agaatgctta
      361 cttgctgtaa acttggctct ttcagagtca catttggcag atatctcagt taatagtcaa
      421 cggttggaaa gcatttgagt taa
//
LOCUS       XM_071886382           10992 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SPIRRIG-like
            (LOC139904458), mRNA.
ACCESSION   XM_071886382
VERSION     XM_071886382.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10992
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..10992
                     /gene="LOC139904458"
                     /note="protein SPIRRIG-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904458"
     CDS             1..10557
                     /gene="LOC139904458"
                     /codon_start=1
                     /product="protein SPIRRIG-like"
                     /protein_id="XP_071742483.1"
                     /db_xref="GeneID:139904458"
                     /translation="MKWNSLLRDFKEKVGLTTVSTSATAASSPSTSSASPSPYHDANN
                     NATSSPQDYFSSSSSSSRDKYELELDFKRYWEEFRSSSSEKEKEKALNMTIDVFCRFV
                     KQHSNVAQLITILVETHIFSFVLGRAFVSDIAKLRVSSKTRLLEIEGLIGYFSEVTED
                     GIQPGSNLLQAVEYLVSGPIDKQSLLDSGILCSLISILNALLGPDERNTRKKVTSIEE
                     DSEVMDNTGPDRRLEVEGSVVHIMKALASHPTAAQSLIEDNKSLQSLFEMVANGSLIL
                     FSRYKEGLVPLHSIQLHRHAMQILGLLLANDNGSTAKYIRKHQLMKVLLTAVKDFKPE
                     TGDPAYTMSIVDLLLECIELSYRPEAGDIRLREDVRNAHGYQYLVQFALVLSKNQEYE
                     KGKGDTSSQDLSPTLSRLLDVLVNLAQTGPPDATLTSSKGNRRSRTSSSDRFPDDNWE
                     KDNYKVKDIDAIQVLQDIFLKADSRELQAEVLNRMFKIFSSHLENYMLCQQLRTVPLL
                     ILNMGGFPPSLQEIILKILEYAVTVVNCIPEQELLALCCLLQQQITSELKHTILSFYI
                     KLLSFDQQYKKVLREVGVLEVLIDDLKQHKFLLGPEQHNGNNDDFEKKSNSSSFKKHL
                     DSKDAIISSPKLLDSGSGKFSLFETKSTVSVAWDCLFYLMKKAEQNQVTFRSANGVTT
                     ALPFLVSDIHRPGVLRVLSCLIIEDSAQVHSEELSMLVDISKSGMVTSALGSQYGLQD
                     DAKCDVFGAIWRVLGANASAQRIFGEATGFSLLLTTLHSFQGDKGQIEPARLSVCTKV
                     FTYLLRVTTAGVCDNAVNREKLNAILSSHTFYDLLSESGLICVECERQVMHLLLELAL
                     EIVLPPFSTLETNSPESSSASFHIVTHSGSFFPEKERIYNAGALRVLIRSLLLFTPKL
                     QLELLKLIEELARAGPFNQENLTSAGCVELLLETICPFLSGSSSLLSHALKIVEVLGA
                     YRLSTAELRTIIRCLLQLRQKNPGHILVDMMEKMVIMQDMTSEHVPLAPFIEMDMRKI
                     GYASIHVSLGERSWPPAAGYSFVCWFQYRNFLKPNTKDSESSKPIFSRRNGMRIFSVG
                     ATDDSDTFYAELCLQEDGRLTLATSNSSSLTFSGLDINEDQWHHLAVVHSKPNALAGL
                     FQASVAYVYLNGKLRHTGRLGYSPSPVGKSLQVTIGTPVTHARVSDLSWTLRSCYLFE
                     EVLTPGSIYFMYILGRGYRGLFQDTNLLQFVPNQACRGASMAILDSLETDLALMSNNQ
                     KAESGSKQGYSRNDRSGIVWDFERLGNLSLQLSGRKLIFAFDGTSTEAFPASGTLSML
                     NLVDPVSAAASPIGGIPRFGRLHGDVYVCKHSIIGETLRPIGGIAVVLALIEVAETSE
                     MLQMALTLLAGALNQNPQNIRDMQAFRGYHLLALFLHSRMSMFDMRSLEIFFQIAACE
                     VSFPEPKKSEETRNTLSPSPSTTVNEMSFEELNLTKFRDENSSDSSRDDMDDFSMPKD
                     TFSHLSELDNDIPPETSNCIVLSNADMVEHVLLDWTVWVAAEIPIQIALLGFLENLVS
                     MHWYRNHNLTILRRINLVQHLLVTLQRGDVEVPVLEKLVVLLGVILEDGFVISELEHV
                     VRFVIMTFDPPEPTSRIQIIREPMGKHIIVRNMLLEMLIDLLVTISSEELLEQWHKIV
                     SSKLITYFLDEGVHPTSMRWIMTLLGVCLTSSPTFALKFRTSGGYEGLMRVLPSYYDS
                     PDIYYVLFCLIFGKPVYPRLPEVRMLDFHALMPNDGNHVELKFLELLDSVIAMAKSTF
                     DRLSVQTQVGGGLVAELVDGSTEMTGDLQGEALMHKTYAARLMGGDASAPAATASVLR
                     FMVDLAKMCPPFLAVCRRAEFIESCVDLYFTCVRAAHGVMMAKELSVKAEDKNIIDGD
                     DSSSSQNTFSSLPHEQEESAKTSISIGSFPPVQGSASSDDIPVVTNNINKSQLKSQPL
                     ESKKSTEEPAPSVLTVDGEPLDHPSDTKQFNYHELKITPVNVHPAGSLGSPSLSIFDS
                     PILSERSNSRFQSIPSPSQILGLPSWLGSAASPVESSVSLNEPESTPDLKSPLLLPNS
                     ANSFSTVNPKLILDVDDSGYGGGPCAIGATAMLDFTAEVLADFVTEQIRSTPIIETIL
                     ETVPLYIDSESVLVFQGLCLTRLMNFLERRLLRDDEEEDKKLDKTRWSLNLDALCYMI
                     VDRVYMGAFPQPAAVLKTLEFFLSMLQLANKDGRIEQALPAGKGILSIGRGVRQLEAY
                     VHSVFKNMNRVTMYCFLPSFLISIGEDEFLLRLGLQIEPRKRLFTNGSQEEGVIDICT
                     VLQLLVAHNRIIFCPSNLDTDLICCLCINLISLLHDQRPNARNLAVDILKNLLVHRRP
                     ALEDLLVSKPNQGPVLDVLHGGFDLLLTGTLTTFFDWLYMSDLIVNKTLEQCAAIMWV
                     QYVAGSVKFPGVRIKGMDGRRKKEIGRKSRDSMKLDQRHWEQVNERRIALDVVRDTMS
                     TELRVVRQDKYGWVLHAESEWQTHLQQLIHEQGIFSLPKSNTSNEPEWQLCPIEGPYR
                     MRKKLERCKLKADTVQHILSGKFEFEEKTENAFADSDSGSGSDLLANMLSNDAKQESF
                     DDEMYDESIFKESGGMKVWNNSNNDRDSSINDESLHSAAEFSMKSSSATAPFTESIQE
                     KSILNSPKKSILSSSTRFDEVKSVEDKLDKELSNNGEYLIRPYLLPTEKIKFRYNCER
                     VVGLDKHDGIFLIGELCLYVIENFYIDESGCICEKESEDGLSVIDQALGVTKDFSMSM
                     DSGSKLTSSWDINVKPNSGGRAWEYNGGAWGKEKVTISGNIPHLWRMWKLNSVHEILK
                     RDYQLRPVAVEIFSMDGCNDLLVFHKKEREEVFKNLLAMNLPRNSMLDTTISGSVKQE
                     SAFKIMAKSFSKRWQNGEISNFQYLMHLNTLAGRGYSDLTQYPVFPWVLADYESEDLD
                     LTDEKSFRKLDKPMGCQTEEGEDEFKKRYESWDDPEIPKFHYGSHYSSAGIVLFYLLR
                     LPPFSTENQKLQGGQFDHADRLFNSVRDTWASAAGRGNTSDVKELIPEFFYMPEFLEN
                     RFDLDLGEKQSGEKVGGVALPPWAKGSAREFIRKHREALESDYVSENLHHWIDLIFGY
                     KQRGKAAEEAVNVFYHYTYEGNVDIDAVTDPSLKASILAQINHFGQTPKQLFQRAHPK
                     RKKDKRHPINPLKYSNYLVPHEIRKSASAIAQIVTSNDKILMVGPNNLLKPRTYANYV
                     AWGFPDRSLRYMSYDQDKLLSTHENLHGGNQIQCASASHDGQLLVTGADDGLVCVWRV
                     GTYSGSRAPRSLQLEKALSAHTSKITCLHICQPYMIIISGSDDRTVVLWDLSSLVFIR
                     QLPEFPSPVSAIYMNELTGEIVTAAGIMLAVWSINGDCLAVVNTSQLPSDFIVSVTTC
                     TFSDWLETNWYVSGHQSGAVKVWQMVHNSSEGVQTNTNQTFGLGRGGQLPEYTLVLRK
                     VLRGHKHSVTALHLTSDMKQLLSGDSSGHLISWTLPDETLRNSIKKGVVLVS"
     misc_feature    3100..3546
                     /gene="LOC139904458"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     Region: Laminin_G_3; pfam13385"
                     /db_xref="CDD:463865"
     misc_feature    8104..8601
                     /gene="LOC139904458"
                     /note="Pleckstrin homology domain in BEACH domain
                     containing proteins; Region: PH_BEACH; cd01201"
                     /db_xref="CDD:275391"
     misc_feature    8692..9531
                     /gene="LOC139904458"
                     /note="Beige/BEACH domain; Region: Beach; smart01026"
                     /db_xref="CDD:214982"
     misc_feature    <9694..10470
                     /gene="LOC139904458"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    9796..9936
                     /gene="LOC139904458"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    9952..10062
                     /gene="LOC139904458"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    10075..10179
                     /gene="LOC139904458"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    10207..10407
                     /gene="LOC139904458"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     polyA_site      10992
                     /gene="LOC139904458"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgaaatgga attcattgct tagagacttt aaagagaagg ttggattaac aacagtaagt
       61 acatcagcta ccgctgcttc atctccatcg acatcatctg catctccatc accttatcat
      121 gatgccaata ataatgcaac atcctcacca caagattact tctcatcatc atcatcttct
      181 tcaagagaca aatatgaatt ggagttggac tttaagagat attgggaaga gttccgttct
      241 tcttcttcag agaaggagaa agaaaaggcc ttgaatatga ccattgacgt cttctgtaga
      301 tttgtaaagc aacattctaa tgtagcacaa ctgattacca tattagtaga gacacatata
      361 ttttcgtttg tcctgggtag agcatttgtt agtgatattg caaagttaag agtgagcagc
      421 aaaacacgat tgttggaaat tgaaggtttg ataggctatt tttcagaggt taccgaggat
      481 ggaatccagc ctggttcaaa tcttttgcag gctgtggaat atcttgtatc tgggcctatt
      541 gataagcaat ctctcctcga ttctgggatc ttatgtagtc tcatttctat tcttaatgcc
      601 cttttgggtc ctgatgaaag gaatacaagg aaaaaggtca cttccatcga agaggattca
      661 gaagtcatgg ataacaccgg tccagatcga cgactcgagg tagagggcag tgttgtgcat
      721 attatgaagg cactcgcaag tcatcctaca gctgctcaga gtttaattga agacaacaaa
      781 tcacttcaat cactctttga gatggttgcc aatggatctt tgattttatt ttcaagatat
      841 aaggaaggtc ttgtaccctt gcacagtatt cagctccaca gacatgcaat gcagatactt
      901 ggtcttctgt tggcgaatga caatggaagc actgccaagt acataaggaa gcatcagctg
      961 atgaaagtac tgctaactgc tgtgaaggac tttaaaccag aaactggaga tcctgcatat
     1021 acaatgagca tcgtggactt gttgcttgaa tgcatagaat tgtcatacag acctgaggct
     1081 ggagatataa ggctcaggga ggatgttcga aatgctcatg ggtatcagta ccttgttcag
     1141 tttgcattag ttctttcaaa gaaccaggaa tatgagaagg gaaaagggga cacctcatca
     1201 caagatctct cacccactct ttcaagatta cttgatgttc ttgtcaatct agctcaaacg
     1261 ggtccacctg atgccacttt gactagttca aagggtaatc gcagaagtcg aacttcgtct
     1321 tccgaccgct ttcctgatga taattgggaa aaggacaact ataaagtcaa agatatcgac
     1381 gctatccaag tattacagga catttttctc aaagcagata gcagggaact tcaggctgaa
     1441 gttctaaata gaatgtttaa gattttttca agtcatcttg agaattacat gttgtgtcag
     1501 cagttgcgaa cggtgccctt gttgatcctt aatatgggtg gcttcccacc ttctttgcaa
     1561 gaaattatcc ttaagattct tgaatatgca gtaaccgttg ttaactgtat acctgaacaa
     1621 gaattgttag ccctttgctg cttgttacaa caacaaataa catccgagtt gaagcacact
     1681 atcttatcat tctatataaa gttattgtca tttgatcaac aatacaaaaa ggtcttgcgc
     1741 gaagttgggg tgttggaagt tttaatagat gatctcaagc agcacaagtt tctattgggt
     1801 cctgagcagc ataatggtaa caacgatgat tttgaaaaga agtcaaactc tagcagcttt
     1861 aagaaacatt tagacagtaa agatgcaatc atttcatctc caaagttatt ggattcaggt
     1921 tcgggaaaat tctctctttt tgaaaccaaa tccacggttt cagttgcttg ggattgtctg
     1981 ttctatttaa tgaagaaagc agaacagaat caagtgacgt tccgttctgc taatggtgta
     2041 acaaccgcac ttccttttct ggtgtctgat atccaccgtc ctggcgtcct tcgtgtgtta
     2101 tcatgtttga ttattgaaga ttctgcacag gttcattctg aggaactgag catgctggtt
     2161 gacatttcaa aaagtgggat ggttacaagt gctttaggat ctcaatatgg ccttcaagat
     2221 gatgcaaaat gtgatgtttt tggagccata tggcgggtct taggagctaa tgcttctgct
     2281 cagagaatat ttggtgaagc cactggattc tctcttctct taacaacact tcatagtttt
     2341 caaggagata aagggcagat tgaacctgct cgtttaagtg tttgcacaaa agttttcaca
     2401 tatttactgc gtgtaactac agctggggtg tgcgataatg ctgttaatag ggagaagtta
     2461 aatgcaattc tatcctcaca cactttctat gatcttttat ccgagtccgg tttaatttgc
     2521 gtggagtgtg aaaggcaagt aatgcatttg ctccttgaac ttgcactcga gatcgttctt
     2581 ccgccttttt cgaccctgga aacaaattct cctgagagtt cgtcagctag ttttcatata
     2641 gttactcatt caggatcctt ttttcctgaa aaagagcgaa tatataatgc tggtgctctg
     2701 agggtcttaa ttcgttcatt gttgcttttc actccaaaat tgcagctgga gttgctgaaa
     2761 ctaatcgaag agcttgctcg tgctggccca tttaatcaag aaaacctaac atctgcgggt
     2821 tgtgtggaac ttctcttgga gacgatatgc cccttccttt cgggttcttc ctctctgctt
     2881 tcacatgctt taaagattgt tgaagtactt ggggcttaca gattatcaac agcagaactt
     2941 aggacaatta tacgatgcct tctgcaactg agacagaaaa atcctggtca tattctagtt
     3001 gatatgatgg aaaagatggt catcatgcaa gatatgactt cagagcatgt tcctcttgca
     3061 ccattcatag aaatggatat gagaaagatc ggatatgcat ccatacatgt gtcgttagga
     3121 gaaagatcat ggccacctgc agctggatat tcgtttgttt gttggtttca gtaccggaat
     3181 ttcttgaaac caaacaccaa agattcggaa tcttcaaaac ctatattttc tagaaggaac
     3241 ggaatgcgta tattctcggt cggtgctact gatgatagtg atacattcta tgcagaactt
     3301 tgtcttcaag aggatggaag gttgacccta gcaacaagca attcgtcttc gttgactttt
     3361 tcagggctag atataaacga agaccagtgg catcatcttg cggtggtgca cagcaaaccg
     3421 aatgctttgg cagggttatt ccaagctagt gtcgcgtatg tttatcttaa tgggaaactt
     3481 agacacacgg gtagattagg atactccccc tcgccagttg gcaagtctct gcaggtaacg
     3541 atcgggacac cagtaactca tgcacgtgtc agcgacttgt cgtggaccct acgatcgtgc
     3601 tatttgtttg aagaagtatt gacaccgggt tccatttatt ttatgtatat tctgggcaga
     3661 gggtatagag gtctttttca agacacgaat cttttacagt ttgtgcccaa ccaagcatgt
     3721 cgtggggcga gtatggccat tttagattct ttagagacag atttggcgct catgtcaaat
     3781 aatcagaagg ctgagagtgg tagtaagcaa ggatactcta ggaatgatcg tagtggaatt
     3841 gtttgggatt ttgaaagatt agggaacctc tcgttacagc tttcgggaag gaaattaata
     3901 tttgcatttg atggtacgtc tacagaagcc tttcctgctt cgggaacttt atcaatgctc
     3961 aatttagttg atccagtctc tgcagccgct tctcctattg gaggtatacc acgctttgga
     4021 cgtcttcatg gtgacgtgta tgtctgtaag cattctataa ttggtgaaac cttacgtcca
     4081 attggtggaa tagctgtcgt cttagccctc attgaagtag cagagaccag tgagatgcta
     4141 caaatggcac tcacacttct tgccggtgca cttaatcaaa atcctcaaaa cattcgtgac
     4201 atgcaagctt ttagagggta tcacttacta gccctctttc tacattcaag aatgtcgatg
     4261 ttcgatatgc ggtcacttga gattttcttt caaattgctg cttgtgaggt gtcttttcca
     4321 gaacccaaaa agtcagaaga aactcgaaat acactgtcac cgtcaccatc aacaactgtg
     4381 aatgaaatga gttttgaaga gctcaatcta actaaattcc gtgatgagaa ttcctcagat
     4441 agttcgcgtg atgacatgga tgatttctct atgccaaaag acacttttag tcatctctct
     4501 gaattagaca acgacatacc tcctgaaaca tcgaattgca tagttctttc aaatgcagat
     4561 atggttgagc acgtgttgtt agactggact gtgtgggtag cagctgaaat tccaattcaa
     4621 atagctctgt tagggtttct tgaaaatctc gtctcgatgc attggtaccg gaatcataac
     4681 ctcaccattt tgcgtaggat aaaccttgtt caacatctgc ttgttaccct tcaaaggggt
     4741 gatgtagagg tccccgtact agaaaaatta gttgtgcttc taggtgtgat tttggaggac
     4801 ggttttgtca tttccgaact tgagcatgtt gttcgatttg tgataatgac ttttgacccc
     4861 cctgaaccaa cttcacggat tcaaataatt agggagccaa tgggaaaaca tattatcgtt
     4921 agaaatatgc tgctcgaaat gctgattgat cttttagtca ccatctcatc agaagagctt
     4981 cttgaacagt ggcataagat tgtctcatca aaattgataa catattttct tgatgaaggt
     5041 gttcatccca caagtatgag atggatcatg actcttcttg gtgtatgtct tacatcttca
     5101 cctacttttg ctctcaagtt tagaactagt ggtgggtacg aaggattaat gagagtgcta
     5161 ccgagttact atgactcccc agatatctat tatgttctct tttgtttaat attcgggaag
     5221 cctgtttatc caagattgcc agaagtccga atgttggact ttcatgccct tatgccaaac
     5281 gatggaaacc atgtcgaatt gaagtttcta gaacttttgg actctgtaat tgcaatggcc
     5341 aaatcaactt ttgataggtt atccgtccag actcaagttg gtggggggct tgttgcagag
     5401 cttgtagatg ggagtacaga aatgacaggt gacctccagg gtgaagcttt gatgcacaaa
     5461 acgtatgctg cccgtcttat gggtggagat gcttcggcac ctgctgctac agcttcggtt
     5521 cttaggttca tggttgactt agccaaaatg tgtcctccgt ttttggctgt ctgcagacga
     5581 gctgagttta ttgagagctg tgtcgatctt tatttcacat gtgtcagggc tgctcatggg
     5641 gtgatgatgg cgaaagagct atcagtaaaa gcagaagaca agaacataat tgatggtgat
     5701 gactctagca gttcacagaa cacattttcc agtttgcccc atgaacaaga agaatctgct
     5761 aaaacctcca taagcatcgg aagcttccct ccagtccagg gaagtgctag ttctgatgat
     5821 attcccgttg tcactaacaa tatcaacaag agtcaactca aaagtcaacc actggaatca
     5881 aaaaagtcaa ctgaagaacc tgcaccgtct gtcttaaccg ttgatggtga accacttgat
     5941 cacccatctg acaccaagca gttcaattac catgaactca aaatcacccc tgttaatgtt
     6001 cacccagctg gttcactggg ttctccatct ttaagtatat ttgattctcc gattttatct
     6061 gagagatcaa attctcgttt tcagtccata ccctcaccat ctcagattct tggtttgcca
     6121 tcttggctgg gatcagctgc gtctcctgtt gaatcttctg tatctttgaa cgaacccgag
     6181 tcaacccctg acttaaagtc tccacttctc ctacctaact ctgcaaattc gttttctaca
     6241 gttaacccaa aactgattct tgatgtggat gattctggtt atggaggggg cccttgtgct
     6301 ataggcgcaa ctgccatgct cgatttcacg gcggaagttc ttgctgattt tgtaacggag
     6361 cagataagat caacacccat tattgaaacc attttggaaa cagtcccttt atatatcgat
     6421 tccgaatctg tattggtctt ccagggtttg tgtcttacga gactcatgaa cttcctagag
     6481 agacggctgt tgcgggatga tgaagaagaa gataagaaac tcgataaaac ccgatggtcg
     6541 ttgaatttag atgctctgtg ttatatgatt gtggaccgtg tttatatggg tgcgtttcct
     6601 caaccggctg ctgtactgaa aacactcgag ttctttctgt caatgttaca gctggcaaat
     6661 aaagatggta gaattgaaca agcattgcca gctggcaaag ggattttgtc gatcggaaga
     6721 ggagttagac aacttgaggc ttatgtacat tcagttttta agaatatgaa tcgggttacc
     6781 atgtactgtt ttctcccttc gtttttgata tcaattggtg aagatgaatt tcttttacgc
     6841 ttaggcttac aaattgagcc aagaaagaga ttgttcacaa acgggtcaca agaagaggga
     6901 gtgatagaca tatgcacagt tttacagtta ttggttgctc ataaccgaat catcttttgc
     6961 ccgagtaatt tagataccga tctaatttgc tgtctttgta taaacttaat ctcactttta
     7021 catgatcaga gaccaaatgc acggaactta gctgttgaca tccttaagaa tcttctcgtg
     7081 caccgtcgac ctgcactcga ggatctgctt gtctcaaaac cgaaccaagg tccggttttg
     7141 gatgttttgc atggcgggtt tgaccttctt cttactggaa cgttgaccac cttttttgat
     7201 tggctataca tgtctgatct tattgttaat aaaactttgg aacagtgtgc tgctattatg
     7261 tgggtacaat atgttgctgg gtctgttaag tttcctggag ttcgtataaa aggtatggat
     7321 ggtcgtagaa agaaagaaat cggtagaaaa tcacgtgatt caatgaaatt agatcaaaga
     7381 cattgggagc aggttaatga gaggaggatt gcgttggatg tggttcgtga tacaatgtcg
     7441 actgaattaa gagtcgttcg tcaagataaa tatggatggg tactgcatgc tgagagtgaa
     7501 tggcaaacac atcttcaaca acttatacat gaacaaggta ttttctcgtt acccaaatca
     7561 aatacgagta atgagcctga atggcagctt tgtccgattg aaggcccata tcgaatgaga
     7621 aagaaattgg agcgttgcaa attgaaagct gacacggtcc aacacatttt aagtggaaaa
     7681 tttgaatttg aggagaagac cgaaaatgct tttgctgatt cagattctgg ttccggttca
     7741 gatcttcttg ctaacatgtt gtcgaatgac gcaaagcagg aatcatttga tgatgaaatg
     7801 tatgatgaat cgatctttaa ggaatctggc ggaatgaaag tttggaataa tagtaataat
     7861 gatagggata gtagcatcaa tgatgaaagt cttcattctg ctgctgaatt cagtatgaag
     7921 tccagctcag caactgcacc ttttacagaa agcatccaag aaaaatcaat tttgaattct
     7981 ccaaagaagt caattttgag ttcatctaca cgatttgacg aagtaaaatc agtggaagac
     8041 aaattggata aggaattaag taacaacggg gagtacttaa ttaggcctta tctgttaccc
     8101 acagagaaga taaagtttag atacaactgt gaaagagttg tgggtcttga taaacatgat
     8161 gggatctttc ttattggaga actttgttta tatgtcattg agaatttcta cattgatgag
     8221 tccggttgta tatgtgagaa ggaaagtgaa gatggacttt cggttatcga tcaagcttta
     8281 ggtgttacaa aagatttctc tatgagtatg gactcggggt ctaagttgac atcttcttgg
     8341 gatatcaatg taaagccgaa tagtggggga agggcttggg aatataatgg tggtgcgtgg
     8401 ggtaaagaaa aagtcactat tagtgggaac atacctcatc tatggcgaat gtggaaactt
     8461 aatagtgttc atgagatttt gaagcgtgat taccagttac gtcctgttgc tgttgagata
     8521 ttcagtatgg atggatgcaa tgatcttctt gttttccata aaaaggaaag ggaggaagtt
     8581 ttcaaaaatc tgttggccat gaatcttcct agaaacagca tgttggacac aacaatttca
     8641 ggatcagtga aacaagaaag tgcttttaag atcatggcta aatcgttttc taagaggtgg
     8701 caaaatggag aaattagtaa tttccagtac ctaatgcatc tcaacacgct tgcaggtcgt
     8761 gggtacagtg atcttacaca atacccagtc ttcccttggg ttttagcaga ttatgagagt
     8821 gaagatctgg acttaactga tgaaaaatcg tttcgaaaac ttgacaaacc catgggatgt
     8881 caaacagaag agggagaaga tgagtttaag aaaaggtatg aaagctggga tgatccggag
     8941 atcccgaaat ttcattatgg atctcactat tctagtgctg gaattgttct tttctatctt
     9001 ttacggttac caccgtttag tacagaaaat caaaagctgc agggtggtca gtttgatcat
     9061 gctgatcgcc ttttcaatag tgtacgagat acatgggcaa gtgctgctgg aagaggcaac
     9121 acatctgatg taaaggaact cattccagaa ttcttttata tgccagaatt cttggaaaac
     9181 agatttgatc ttgaccttgg agagaaacaa tctggagaaa aggttggagg tgttgcgtta
     9241 cctccttggg ccaaaggtag tgctagagag ttcattagaa agcataggga agctctcgaa
     9301 tctgattacg tttctgaaaa tttgcatcac tggatagatc tcatctttgg ttataaacaa
     9361 cgagggaagg cggctgaaga agctgtaaac gtattctacc actacacata tgaaggaaac
     9421 gtcgacatag atgcagttac cgatccttca ttgaaagcat ccattttagc tcaaatcaat
     9481 cattttggtc aaacacccaa gcagctattt caacgggctc atcccaagag aaagaaagat
     9541 aaaagacatc caattaatcc actcaaatac tcaaattacc tcgtcccaca cgagattcgt
     9601 aaaagtgcat ccgccatcgc ccaaatcgtc acttcaaatg acaaaattct catggttgga
     9661 cccaacaatc ttctaaaacc cagaacctac gccaattacg ttgcctgggg tttcccagac
     9721 cgtagtttga gatacatgag ctatgatcaa gataagcttc tttcaaccca cgaaaacctc
     9781 catggcggca accagatcca gtgtgccagt gctagccatg atggtcagct tctagtcact
     9841 ggtgcagacg acgggttagt ttgtgtttgg cgggtcggta cctacagtgg gtcccgcgcg
     9901 ccacggtctt tacaattgga aaaggcactt tctgctcata catcaaaaat cacgtgtctt
     9961 cacatttgcc agccgtacat gattattata agtggttcag atgaccgcac cgttgtctta
    10021 tgggatctta gctcattggt tttcattaga caactacccg agtttccatc tccagtttca
    10081 gctatttata tgaacgaatt aacaggagaa atcgtgacag ctgccgggat tatgcttgct
    10141 gtttggagta taaacggcga ctgtttagct gttgttaaca catcacaact tccgtctgat
    10201 ttcattgtgt ctgtgaccac ttgcacgttc tctgattggt tggaaacaaa ctggtatgtc
    10261 tcgggtcatc agagtggtgc ggttaaggtt tggcaaatgg ttcataactc cagtgaaggt
    10321 gtccaaacta atacaaacca aacatttggg cttggtcgag gtggtcagtt gcctgaatac
    10381 actttggtct tacgaaaggt gctgaggggt cataaacact ctgtcacagc ccttcacctc
    10441 acaagtgaca tgaagcagct tttgagtggg gattcaagtg gccatttgat ttcatggacg
    10501 ttacccgatg aaactttgag aaattctatt aaaaaggggg tggttttagt ttcttaatta
    10561 aagtataatc atgacaagtg acaccatttt gtttttcaga aacgggaccc gtcaccccaa
    10621 cgggttaacg ggttcagtgt ccatcctcct aacacgaaaa gggctggccc gggattagag
    10681 gttgaggtga agagaaagct atgggatcac gtgctttgtt ggggaatgga ggattgtgaa
    10741 acgtttattg tttttgttta tttgaactaa tagtgtacat agaagaaggg gttaatttaa
    10801 atctggatta taaatttgaa tttgtatagc tgtgcaagaa gggagatcag ttgagacttg
    10861 agactgtgat gcccctattt tggcctgggg aatatagttt ctgttgtgtt tttattgaca
    10921 ttttttgttc catttgtaag aatatacaca tgatttgtta gtcttcaaat ctatagtgga
    10981 aattttaaat tt
//
LOCUS       XM_071886383            1253 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904460), mRNA.
ACCESSION   XM_071886383
VERSION     XM_071886383.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1253
                     /gene="LOC139904460"
                     /note="uncharacterized LOC139904460; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904460"
     CDS             279..1019
                     /gene="LOC139904460"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742484.1"
                     /db_xref="GeneID:139904460"
                     /translation="MNLYYIDEVNSQNFITGLTGWPSGVEPRDFWTTFGAGDYQTYLS
                     STSITQPSYKILHRAIFETINQRATCTYNVTRSDMLYMYYIVHNTLCNLARCLARYLY
                     KSVRKKHNAAICGGAYITQLALGLGDNTESDLLALTEVATTTYFDEAHLANLDLVDNK
                     NHSGGNVSAAREERTAVNSEAFQDPRFSDLEKDLHYTNEAVRFLFKELGYSFAPCPSS
                     SRQSGKAASSSHPKFTKSTVARFRARLP"
ORIGIN      
        1 ttttcatcaa tttgtaatat atttttttaa gaagaattgt atattgttga ggtcaaatga
       61 taagtgatac cccggtgtcc atgctagaca agatatctca ccatccagaa gaacaagcca
      121 cggtagtaaa aacaaccacc acaaaaaaca gcatccctac aaatacagag tacttatcgg
      181 ttcaacaagt acgttgatag tgtgacttcg acagctatgc agttctcact acttggtaaa
      241 aaaaatatga acttttgttt tttgaatttg cgttggctat gaacttgtat tacattgatg
      301 aagtcaatag tcaaaatttt attactggtt tgactggttg gccgtcgggt gttgaaccac
      361 gggatttttg gaccactttt ggagcagggg actatcaaac atacttgtca tccacatcga
      421 tcactcaacc atcttataag atactgcatc gagcaatttt cgaaacgata aatcagcgtg
      481 ctacctgcac ttacaacgtt acacgatctg acatgttgta tatgtattat attgttcata
      541 atacactgtg taacttggcg aggtgtttag ctcggtatct atataagagt gtgaggaaaa
      601 aacataatgc tgctatttgt ggtggggcct atataaccca gttagctcta ggtttagggg
      661 ataatactga gagtgatcta cttgctttga cagaggttgc aactacaacc tattttgatg
      721 aagcacattt ggcaaaccta gacctagttg ataacaaaaa ccattctggt ggcaatgtca
      781 gtgccgcaag ggaagaaaga actgctgtca acagtgaagc tttccaagat cccagattca
      841 gtgatttgga aaaagattta cactatacga atgaggcggt acgtttttta tttaaagaac
      901 tcggatattc gtttgcgccc tgtccttcct ctagtcgtca atctggtaaa gctgctagtt
      961 catctcaccc taaattcaca aaatcaactg ttgcacgttt tcgtgctcgt cttccgtaaa
     1021 atgatgaaac ttcaggtact tccagtgggt agtgtgtcgt aatcaactgc tactgcttta
     1081 ggtttgtgtt ttttgattca gatcgaactc ttgcttattt ttggttatgt actttgattg
     1141 ttatgttaat ttcagtactg tttgataagt atttcaatag tttggaacta gtatcttttg
     1201 gatattttgt ttacaatcct agtttatgga tgttatttat cactggtttt att
//
LOCUS       XR_011778808             556 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904461), ncRNA.
ACCESSION   XR_011778808
VERSION     XR_011778808.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..556
                     /gene="LOC139904461"
                     /note="uncharacterized LOC139904461; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904461"
     ncRNA           1..556
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904461"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904461"
ORIGIN      
        1 tccaactgca atttcttcat ccgactgttt ttttaccccg taaatcgtgg ttccgacgaa
       61 tcgttttggc ttcgggcgac tgtttccacc ctttgaatcc gttaatcgtt atgaacgatt
      121 atcctttttt ctaggatttt ttgaaatcga ttgttgattt ggggtaaaca ttagggttac
      181 aggcgtttcc gtgactgtcg tcgcgtatgt aaccaccgtt gccgccactg tcgcagtcga
      241 taactggtta tattttcgtg ttgtgactac cttctggctt tgtttcgata tatggtgtgc
      301 gctcatctat gttactgtcg tttgcttctg caattagagt ttacaacgtt gtcaggtttc
      361 gaataactgt ggttttatta gatgggtgga tccgcccatg tgtcagagag ctattgaaat
      421 cattccaaga ttgcttcaaa gtagaaacat gatggaagca agtattaaag agaaagagag
      481 tcaattgctt tagttgaaga ttatagttgt tattctagtt attttgatat gctatttgtt
      541 gtgtaattaa atcaac
//
LOCUS       XM_071886384            1020 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-responsive
            transcription factor ESR2-like (LOC139904462), mRNA.
ACCESSION   XM_071886384
VERSION     XM_071886384.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1020
                     /gene="LOC139904462"
                     /note="ethylene-responsive transcription factor ESR2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139904462"
     CDS             1..1020
                     /gene="LOC139904462"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     ESR2-like"
                     /protein_id="XP_071742485.1"
                     /db_xref="GeneID:139904462"
                     /translation="MEEAMRRLAGYTPSQEPADLFFQTPSSTLQKRPTNNTPITTNKR
                     LAVKETNTNTNTNTSVRYRGVRRRPWGRYAAEIRDPHSKERRWLGTFDTAEEAACAYD
                     CAARAMRGTKARTNFIYPPPLSDQSNFLNINPFSYNKNQTLPFNSSTYSNVHVPSLQR
                     NGAPLNSLLFHDFFSSGSGSGLASSSALSSCTASPSKSCTTTVVNQEVQLKEFFPSEP
                     DHSGLLDDVLSGFYPKPELKTKAGPDPVREVKRTGVETNPFGLFLENPNNNNGFSFNG
                     SCGHLNQFDFDHGCNAGVSGGGGLPFYSHQPVEIESHQESVFGDVFQFQDFVGLYATA
                     RLQNA"
     misc_feature    181..351
                     /gene="LOC139904462"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(187..192,196..198,202..204,208..210,214..216,
                     226..228,232..234,253..255,259..261,268..270)
                     /gene="LOC139904462"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
ORIGIN      
        1 atggaagaag ccatgagaag acttgcaggt tacacaccat cgcaagaacc agctgactta
       61 ttctttcaaa ccccatcttc aacactacaa aaacgtccca caaacaacac cccaataacc
      121 acaaacaaac gactcgccgt taaagaaacc aacacaaaca ctaacaccaa cacttccgtt
      181 agataccgcg gtgtccgacg ccgtccatgg ggccgttacg ccgccgaaat acgggaccca
      241 cattccaaag aacgtcgttg gcttggtacc tttgatacag ctgaagaagc tgcatgtgct
      301 tacgattgtg ccgcacgtgc catgcgtggt actaaagcta gaactaattt catttaccca
      361 ccacccttat ctgatcaaag caactttctt aacatcaatc ctttttctta caataaaaat
      421 caaacgctgc cgtttaattc ttctacctac agtaacgtcc atgtaccttc gttacagagg
      481 aacggtgctc cgcttaattc cttacttttt catgatttct ttagctccgg ttcgggttcg
      541 ggtttggctt ctagttctgc tttgtcgagt tgtacggctt ctccttcgaa gagttgtacc
      601 acgacggtgg tcaatcagga ggtgcaactt aaggagtttt tcccttccga accggatcat
      661 tctggtttgt tagatgacgt gttgtccggt ttttatccta aaccggagct taaaactaaa
      721 gctggaccgg acccggttcg ggaggtgaaa aggactggtg ttgaaacaaa cccttttggt
      781 ttgtttttag aaaaccctaa taataataat gggttttcat ttaatgggag ttgtggtcat
      841 ctcaatcagt ttgactttga ccatgggtgt aacgccggtg ttagcggtgg tggtgggttg
      901 ccgttttaca gtcatcagcc ggtggaaatt gagagtcatc aagagagtgt gtttggagat
      961 gtttttcagt ttcaagattt tgttggtttg tatgcaactg ctagacttca gaatgcttaa
//
LOCUS       XR_011778809             532 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904463), ncRNA.
ACCESSION   XR_011778809
VERSION     XR_011778809.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..532
                     /gene="LOC139904463"
                     /note="uncharacterized LOC139904463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904463"
     ncRNA           1..532
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904463"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904463"
ORIGIN      
        1 aaacgctaca tgaatgaaaa ggagtaactt ccacttcttt atgagatatg tcatatgagc
       61 tttttgatat tttataagtt ttttttatat cctttagcca ttaaaaaata taaatatcat
      121 gatataaata tcatgtgtag ggctctcaca aaaagaatga catctatggt agggacatgt
      181 attctttgta gcaataaaac tgggctctga gtttgaagaa gcaatctgtt gacaactcat
      241 tgaggttgac acaaatgaat agcaaagaat atctcgagca cctcagtgaa atgatacaac
      301 tcaatggctt cacaatctta gagataaatc taagttagtg ctgggcatat catggaatga
      361 gggttttatg cttcgaaaat gatggtacat gcttagaaat aatggagttg ttgtgaagac
      421 actaatcgag tttgtctata ttgctcgatt cctaatgtta ccctccacat ttttacgttt
      481 tatatatatc atctaagctc tttattggaa ctcttaattc aatcacagat tc
//
LOCUS       XR_011778810             519 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904464), ncRNA.
ACCESSION   XR_011778810
VERSION     XR_011778810.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..519
                     /gene="LOC139904464"
                     /note="uncharacterized LOC139904464; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904464"
     ncRNA           1..519
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904464"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904464"
ORIGIN      
        1 tatgagggca gaaaataaga agaagaacga gtttagtaaa caaaaatcaa aagccttcaa
       61 acctagtgat tcttcttcat gcaagcttga atttgagcaa ttaagggtgt gcaaaatata
      121 gtagaagcaa gaaaatcatc atcaccacct tcttttcatc aatttcaatt agagttcttg
      181 agaagaactt gaggtgctaa tcaagaggag gaagttggaa acactcaagc ttagatcaag
      241 gacaaggacc acataagcat cgtgaaggta aagaaccaac tcaagattag cggagcattt
      301 ggcatagagt aagtggtatg caactctcga ttacctagtg attttgattt accgcttgtt
      361 agacaccatg ggtcaagaat gtattttgta tgaaaccatg tggttgtgtc ttttgtttga
      421 aatggttata tgtaaacgtc taaatagttt tgaagggttg gtgtgatgta ttatttgaag
      481 ttaaaacatg tggtatttga atggtgcaca atggtattg
//
LOCUS       XM_071886386            2104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent protein
            kinase SK5-like (LOC139904465), mRNA.
ACCESSION   XM_071886386
VERSION     XM_071886386.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2104
                     /gene="LOC139904465"
                     /note="calcium-dependent protein kinase SK5-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 160 Proteins"
                     /db_xref="GeneID:139904465"
     CDS             189..1748
                     /gene="LOC139904465"
                     /codon_start=1
                     /product="calcium-dependent protein kinase SK5-like"
                     /protein_id="XP_071742487.1"
                     /db_xref="GeneID:139904465"
                     /translation="MSSSSPTSISNSNSSQPTKPPILKKPNPSSSSTNSKPFYVLKQK
                     TPVLQQLYTIGRKLGQGQFGTTHLCTEKSSGIAYACKSIPKKKLICKEDYEDVLKEIQ
                     IMHHLSEHNNVVRIKGTYEDALYVHIVMELCAGGELFDRIVQKGHYSEREAAKLIKTI
                     VGVVEACHSLGVMHRDLKPENFLFSTTHEDATLKATDFGLSVFYKPGETFSDVVGSPY
                     YVAPEVLRKHYGPESDVWSAGVILYILLSGVPPFWAETEMGIFRQILQAKLDFESEPW
                     PSITDSAKDLIRKMLDRNPKKRLTAHEVLCHPWIVDDKMAPDKPLDSAVLSRLKQFSA
                     MNKLKKMALRVIAETLSEEEIGGLKELFKMIDTDNSGTITFEELKEGLRRVGSELMES
                     EIKDLMDAADIDNSGTIDYGEFLAATVHLNKLEREENLLSAFSFFDKDGSGYITIDEL
                     QQACEEMGLGEVHLDEIVKEIDQDNDGQIDYGEFAAMMRMGNGGVGRRTMRGNLNLGE
                     ALGVVQPENTS"
     misc_feature    342..1115
                     /gene="LOC139904465"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; Region: STKc_CAMK; cd05117"
                     /db_xref="CDD:270687"
     misc_feature    order(360..374,384..386,423..425,429..431,528..530,
                     576..587,597..599,603..605,711..716,720..722,726..731,
                     735..737,774..779,786..788,828..842,846..848)
                     /gene="LOC139904465"
                     /note="active site"
                     /db_xref="CDD:270687"
     misc_feature    order(360..371,384..386,423..425,429..431,528..530,
                     576..587,597..599,726..731,735..737,774..779)
                     /gene="LOC139904465"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(372..374,597..599,603..605,711..716,720..722,
                     726..728,786..788,828..842,846..848)
                     /gene="LOC139904465"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(774..800,828..842)
                     /gene="LOC139904465"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270687"
     misc_feature    1224..1652
                     /gene="LOC139904465"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
     polyA_site      2104
                     /gene="LOC139904465"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggggtcccaa aaattagagt aatttttaat tctatataca tacaaatatg tatctctata
       61 gtcatagttt tgtgtagtca caatcctact attacaaaca tctttcttga tttcttgttc
      121 ataaatcttg attttttgtt tttttttttc tttacccatt ccataaagtt caaaactttg
      181 caaagaaaat gtcatcttca tcaccaactt caatttcaaa ttcaaattca tcacaaccca
      241 caaaaccccc aatcttgaaa aaaccaaacc catcatcatc atcaacaaat tcaaaacctt
      301 tttatgttct taagcaaaaa accccagttc ttcaacagtt gtacacaatt ggtagaaaat
      361 taggtcaagg gcagtttggt acaactcatt tatgcacaga gaaatcatct ggtattgctt
      421 atgcttgcaa atcaatcccc aaaaagaaac taatttgtaa agaggattat gaagatgttt
      481 tgaaagaaat acaaataatg catcatttat ctgaacataa taatgttgtg agaattaaag
      541 ggacttatga agatgcttta tatgttcata ttgttatgga gttatgtgct ggtggtgagt
      601 tgtttgatag gattgtgcaa aaaggtcatt atagtgaaag agaagctgct aaattgatta
      661 aaacaattgt tggtgttgtt gaagcttgtc attcattggg tgttatgcat agagatctta
      721 aacctgaaaa ctttttgttt tccaccactc atgaagatgc tactcttaaa gccactgatt
      781 ttggcttgtc tgttttctac aaaccaggtg aaacattttc ggacgtggtt ggaagccctt
      841 actacgttgc tccagaggtt ttacgtaagc attatggacc tgaatctgat gtttggagcg
      901 caggggttat tttgtacatc ttactcagtg gtgttccccc tttttgggca gaaactgaaa
      961 tgggcatctt tcgtcagata ttacaagcaa aactagattt tgaatccgag ccatggcctt
     1021 cgataactga cagtgcgaaa gatcttataa ggaaaatgct tgatcgaaat ccaaagaaaa
     1081 ggcttactgc tcatgaagtt ttatgtcacc cgtggattgt tgatgataaa atggcacctg
     1141 acaagccact tgattctgct gttttatcgc gtttgaaaca gttctctgcg atgaacaagc
     1201 tcaagaaaat ggctttacgg gtgattgccg aaacgctttc agaagaagaa attggtggat
     1261 taaaggagtt gttcaaaatg atagatacgg acaatagcgg tacgattaca tttgaagaac
     1321 taaaagaggg cctaagacga gtaggttctg aacttatgga gtctgagatc aaggacctaa
     1381 tggatgctgc tgatatagac aacagtggga caatcgatta tggtgaattt cttgcagcga
     1441 cggtacactt gaataagctg gagcgagaag agaatctttt gtccgcattt tcgttttttg
     1501 ataaggatgg gagtggttac ataactatcg atgagctcca acaagcgtgt gaagagatgg
     1561 gtttaggtga agtccacctt gatgaaatag tcaaagaaat cgaccaagat aatgatgggc
     1621 agattgatta tggggagttt gctgctatga tgaggatggg caatggtggg gtcggtcgga
     1681 gaactatgag aggcaacctg aacctaggtg aagctcttgg agttgtacaa cccgaaaaca
     1741 cctcgtaaca aaatgctgca gccgtaaaaa cgtcatctag atcttactaa tcggttatac
     1801 tattttggta ctggttagat tgaagaacta attttcggat gttaatttat ttagcattca
     1861 gaagtggcct cattttgtac ttacagatta aaccgacttt tattttgatt ttgaactatg
     1921 aacttggtct ttggttatga tttctacaca ttgtgtcaaa aatgctacat tttacaaaaa
     1981 agttaaaaac ttttcttgaa aacacgacat gtgaggtcga ccaattgact attgaggttg
     2041 accaattttc gctctcttca ttatcatatg ttacatgggc tttaattagg aacattttgt
     2101 aact
//
LOCUS       XM_071886387            2034 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At1g71490-like (LOC139904466), mRNA.
ACCESSION   XM_071886387
VERSION     XM_071886387.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2034
                     /gene="LOC139904466"
                     /note="pentatricopeptide repeat-containing protein
                     At1g71490-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139904466"
     CDS             1..2034
                     /gene="LOC139904466"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At1g71490-like"
                     /protein_id="XP_071742488.1"
                     /db_xref="GeneID:139904466"
                     /translation="MLISLLNSLKQSTTQNDLSKAFNTFSLILQQYSQNPSTSHYILQ
                     SLASLISCCSLLKSTSQGKQLHAYIITFGFEKSPVLVPKLVTFYSGSNLLRDAYYVTL
                     NLNILHPLPWNVVISSYIRAGFRKDGLFVYQKMVKQGIVPDIFTYPSVLKACGEEFDL
                     GFGKAVHNLIVQSGLGWNLFMYNALVFMYGKCGDLKSARKLFDEMPERDCVSWNSIIS
                     GYASKGMWREAFELFDRMQDENVDANMIIWNTVVGGYLKTGDYMRVIKMISQLRTYGD
                     EWDHVAVINGLNACSHIGALRSGREIHGLAIRTCCYAYDNVKNALITMYSRCMDVKHA
                     YIAFNLIGDKSVITWNSIITGFAHLDNAEEATYLFREMLLSKVEPSYVTIASILPLCA
                     RVANLQHGKEFHCYVIKHEEFQNYLLLFNSLIDMYARSGKILLARRLFNSLTKKDEVT
                     YTAMIAGYGIQGDGRMAVDLFDEMIRSNIMPDHVTMVAVLSACSHSALVDQGQTLFNK
                     MRDEYGIVARLEHYACMVDLYGRAGLLDKAEETIRTMPYKPTPAMWATVIGGCRIHGH
                     EELGKFAGEKLLEMRPRSSGYYVLVANMYAEFGWWEKLAEVRVLMRELGVNKVPGCAW
                     LDVGDGFTEFSVADTKNVKAVEIYDMLDGLSEQLKEAGYIMSDDKDELMEAFR"
     misc_feature    142..2004
                     /gene="LOC139904466"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    334..414
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    541..624
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    628..717
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    733..816
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    955..1032
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1042..1125
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1141..1338
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1348..1431
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1447..1539
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1555..1644
                     /gene="LOC139904466"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgttaattt ctctactaaa ctctctcaaa caatcaacaa ctcaaaacga tttatcaaaa
       61 gcattcaaca ctttttcatt aatcttacaa caatattccc aaaatccatc gacatcacat
      121 tacatattac aatcattagc ttcacttatt tcatgttgtt cactacttaa atcaacttca
      181 caaggaaagc aattacacgc ttatataatt actttcggtt tcgaaaaatc ccctgttttg
      241 gtcccaaaat tggtcacgtt ttactctggt tcaaatctat tgcgtgatgc gtattatgtc
      301 actctaaatt tgaatatatt gcatccttta ccatggaatg tagttatctc tagttatatt
      361 agagctgggt ttcgaaaaga tggtttattc gtgtatcaaa aaatggtgaa acaggggatt
      421 gtaccggata tatttacgta tccctctgtt cttaaagcat gcggcgaaga atttgatttg
      481 gggtttggga aggctgttca taatttgatt gttcagtcgg gtttggggtg gaatttgttc
      541 atgtataatg cattggtgtt tatgtatgga aaatgtggcg acttgaaatc tgcacgtaaa
      601 ctgtttgatg aaatgcctga gagagattgt gtttcttgga attcaattat ttcagggtat
      661 gctagcaaag gcatgtggag ggaagctttt gagctttttg atcgtatgca ggatgaaaat
      721 gtcgatgcaa atatgataat ttggaatacc gttgttggag ggtacttgaa gacaggtgac
      781 tatatgcgag tgataaagat gatttcccag ctgaggactt atggtgatga atgggatcac
      841 gtggctgtaa tcaacggttt aaatgcgtgt tctcatattg gtgcgttaag atctggaaga
      901 gaaattcatg gtttggctat tcggacgtgt tgctatgctt acgataatgt gaaaaatgca
      961 ttgattacga tgtattcaag gtgtatggat gttaagcatg cttatattgc gtttaattta
     1021 attggagata aaagtgtgat tacatggaat tcaataataa caggctttgc acatttggac
     1081 aatgcagaag aagccacata tctttttcgg gaaatgttgc tttctaaagt tgaacccagt
     1141 tacgtgacga tagcaagcat acttcctttg tgtgcccgag tggcaaatct tcaacacggt
     1201 aaagagttcc attgttatgt tataaagcac gaagaatttc aaaattactt attgctattt
     1261 aactcactta tcgacatgta tgcaagatct gggaaaatct tgttagcgag aagattgttt
     1321 aatagtttga ccaaaaaaga tgaagtcaca tacactgcaa tgatagcagg ttacgggatc
     1381 caaggagatg gacggatggc ggttgacttg tttgacgaga tgattaggtc aaacataatg
     1441 ccggaccatg tgaccatggt tgcggttttg tcagcttgta gtcattctgc acttgttgac
     1501 caaggtcaaa ctttgtttaa caagatgcgt gatgaatacg ggatagttgc tcgtttagag
     1561 cattatgcat gcatggttga tttatatggg agagctggtt tattggataa agcagaagaa
     1621 acaatcagaa caatgcctta taaaccgaca cctgcaatgt gggccacggt tattggaggg
     1681 tgtcggatcc atggacacga agagttggga aaatttgccg gtgagaaact gttggaaatg
     1741 aggcctcgga gttcgggata ttatgtattg gtggcaaaca tgtatgctga atttgggtgg
     1801 tgggagaaac tagctgaagt tagggttttg atgagggaat tgggtgtgaa taaggttcct
     1861 ggttgtgcat ggttagatgt aggagatggg tttactgagt tttcggttgc agatacgaag
     1921 aacgtgaagg cagttgagat ttatgatatg ctggatgggt tgagtgaaca attgaaagaa
     1981 gctggttaca ttatgtctga tgacaaagat gaacttatgg aagcatttag atga
//
LOCUS       XM_071886388             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides VQ motif-containing protein
            8, chloroplastic-like (LOC139904467), mRNA.
ACCESSION   XM_071886388
VERSION     XM_071886388.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139904467"
                     /note="VQ motif-containing protein 8, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139904467"
     CDS             121..678
                     /gene="LOC139904467"
                     /codon_start=1
                     /product="VQ motif-containing protein 8,
                     chloroplastic-like"
                     /protein_id="XP_071742489.1"
                     /db_xref="GeneID:139904467"
                     /translation="MSSRKFLVADNKQRTKNGVEINGPRPTPLKVRQESRTIQKHRPI
                     IIYMHSPEVIHTKPHDFMALVQKLTGCSGSKDQDQNQDQRLKKTLKQEDGYDRNENEI
                     SNVSSVISKKDNIMKAKSPMFSMPSNPYMKDIPLFTPNSNNEYFYSPQRFFRYPDTVS
                     SSSPNLSFSLSPGSIVEILKGLPEC"
     misc_feature    262..>330
                     /gene="LOC139904467"
                     /note="VQ motif; Region: VQ; pfam05678"
                     /db_xref="CDD:461711"
ORIGIN      
        1 tcaagcccta tcgatcaaca atcgatctaa cttacaaaaa tcgaactttc gtctattcaa
       61 ttagcttaat cgtcgtatct atttagggtt cctaaaagag tttgtaactt tggtgaaaaa
      121 atgagttcta gaaaatttct tgtagccgat aacaaacaac gtacaaaaaa tggagtagag
      181 atcaacggtc caaggccgac gccattaaaa gtaagacaag aatctcgcac aattcaaaaa
      241 catcggccga ttataatcta catgcattcg cccgaagtta ttcatacaaa acctcatgat
      301 ttcatggctc ttgttcaaaa gctcactggt tgttctggct ccaaagatca agatcaaaat
      361 caagatcaac ggcttaagaa aacactaaag caagaagatg gctacgatcg aaatgaaaat
      421 gaaatttcga atgtatctag tgtcatatcc aagaaagata atattatgaa agccaagagt
      481 ccaatgttta gtatgccttc aaacccttat atgaaagata ttccactttt tacaccaaat
      541 tcgaataatg aatatttcta ctcacctcaa cgtttcttta gatacccgga tacggtatca
      601 tcttcatctc caaacttgag tttttcattg tcgccaggtt cgattgttga gatcttgaag
      661 gggctacccg aatgttgatt acagtttgtc attattaatt actcaaaact tatatcatat
//
LOCUS       XR_011778811             414 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904468), ncRNA.
ACCESSION   XR_011778811
VERSION     XR_011778811.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..414
                     /gene="LOC139904468"
                     /note="uncharacterized LOC139904468; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904468"
     ncRNA           1..414
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904468"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904468"
ORIGIN      
        1 ggtatcgtgt tatgttttga acatattcat cttcattcaa ttgttttcga tcttccatct
       61 tcaagatgaa ggatgcgaaa tagtaaattg aagatggaag cataatgatg taattagtta
      121 atgaacacca catgcttgat aaaatgccac aaagaagttc aacaacgaat gtggttacag
      181 gatcagtggg tcattgagtt gagaacaatg cgtaaaaact aaaaacaggg tcggtgagta
      241 caatgggtta aaaactgaaa acagggtcag ggtcggtgga gacatgtcat cttttttaaa
      301 gtcaaggcct caacatgtag ttcatggggt catgtaattc acactctttt gttaaaatat
      361 ttatgggggt taaatgtttg cataagagac tgctctggaa ttgggctcct tcgg
//
LOCUS       XM_071886389            3360 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X1, mRNA.
ACCESSION   XM_071886389
VERSION     XM_071886389.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3360
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3360
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1645..3009
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X1"
                     /protein_id="XP_071742490.1"
                     /db_xref="GeneID:139904469"
                     /translation="MYFNLIYCCGQNCFYVVMECNEGRHNILMVSDFFYPNFGGVENH
                     IYLLSLCLLKLGHKVVVMTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTL
                     PIVRTILLREKISLVHGHQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMN
                     KVLQFTLADVSQAICVSHTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDP
                     IVIVVVSRLVYRKGADLLVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDR
                     VEMLGAVPHAKVRSVLNSGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP
                     DDMIVLAKPDPRDMVHAIKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRAL
                     RCSNQTLLERLPRYLTCGALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQ
                     SKPG"
     misc_feature    1720..2907
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1762..1764,2314..2322,2506..2508,2572..2574)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg tatacatcac tttccacctg
     1081 ctaattctaa tatgcaattg tttagttgat ttcgtcttta tgtaatcatg ttattgttac
     1141 cttaatttga atagttaaat atttctcatt gtgtatgtaa aatcatactc cgtataactt
     1201 gaaaatatga tagcaacagc aataggaatc gaaattcact agtgcttttt gaatttaatt
     1261 gaatgtatat attttgattt tgactagaat aagataagat ggctagattg ggactacaca
     1321 ccagtttagg atgaccgaat gctctcttaa gtcttaagta agatggactc agttaatgta
     1381 ttgacagaat aagaactaca gtcacctcag cccaataagt cataactcat aagtaaacat
     1441 gccctcagtg ctctagtgta gattttcgta aaattattac tatatgtcac actgttccgt
     1501 catgtatatt ttttcaggcg gtctgttata aatagtgttt tctaatccgg tgaaaccaaa
     1561 ggtaatattt catataggga aagttggata tgttccaata aagagatgag agatgtaaac
     1621 tttcattcta cgatttaaca actcatgtat tttaatctca tatattgttg tggacaaaat
     1681 tgtttctatg tagttatgga atgcaacgag gggaggcata acattttgat ggtatctgat
     1741 tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc actatgtttg
     1801 cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg ttccggggtt
     1861 aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt tcttatgcaa
     1921 aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct tcttagagaa
     1981 aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga agctttaatg
     2041 cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata tggttttgct
     2101 gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga tgtaagtcaa
     2161 gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg gttgccaccc
     2221 gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc tgctacagta
     2281 agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta tcgtaagggt
     2341 gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa tgtccgcttt
     2401 atcattggag gagatggacc caagagagta agattagaag agatgaggga aaaacactct
     2461 cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg atctgttttg
     2521 aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat agcaatacta
     2581 gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt accagaggtt
     2641 ctaccagatg atatgattgt tcttgctaaa ccagatccta gggatatggt acatgcaatt
     2701 aagaaggcaa tacggatact tcctcaaatt gatccacaag agatgcacct tcgtataaaa
     2761 ggcatgtata gttggcacga tgttgccaaa agaacagaga ttgtgtatga tcgtgccttg
     2821 agatgttcga atcaaacctt attggaaaga ctccctaggt accttacatg tggtgctttg
     2881 gcaggcaaac ttttttgtct agttatgatc attgatttca tattatggcg actattacaa
     2941 ctgtggcagc ccgactctga agttgaggtg gtacctgata taaagcactc acagagcaaa
     3001 cctggatgag aaaatgatca taggtacagt tacccactac aaaggttcat tgatattcgt
     3061 attactaatc attacagctt aaaattttgt aatacttgct atccagtaaa taggcacttt
     3121 agatatgaaa tttacgtctg aggagcagat tataagtatt ttgattcttg tagaaccgga
     3181 aaaatatggc aagcaaagga agtatgtctg taaaagtttc aactgtccaa ctttttgtag
     3241 aattatttta tgttaaaatc aatgattttg tggtatgtat atgtccatct catgtttatc
     3301 atcctttaat aagtatttgc aatgtaaatt tatctcatgg ttgcttttga ttgttagaaa
//
LOCUS       XM_071886390            3104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X2, mRNA.
ACCESSION   XM_071886390
VERSION     XM_071886390.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3104
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1389..2753
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X1"
                     /protein_id="XP_071742491.1"
                     /db_xref="GeneID:139904469"
                     /translation="MYFNLIYCCGQNCFYVVMECNEGRHNILMVSDFFYPNFGGVENH
                     IYLLSLCLLKLGHKVVVMTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTL
                     PIVRTILLREKISLVHGHQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMN
                     KVLQFTLADVSQAICVSHTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDP
                     IVIVVVSRLVYRKGADLLVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDR
                     VEMLGAVPHAKVRSVLNSGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP
                     DDMIVLAKPDPRDMVHAIKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRAL
                     RCSNQTLLERLPRYLTCGALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQ
                     SKPG"
     misc_feature    1464..2651
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1506..1508,2058..2066,2250..2252,2316..2318)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 aggtggcttt gtctctgttt caaggattaa agattgaaga tcactttcaa aattttctgt
      301 cggatacccg aaatttcgga ttcggatatc ggatggccaa atctactctc ccaaatttcg
      361 gatatctcaa atttcggata tccgaatttc cggttttgaa ccccccatgc ttgtaatttt
      421 cagtatataa ttattattaa aaatcttgtt gcttttcagg aaaaagaaaa accttaataa
      481 cttgtgattg tctaaaatcg tcgattaatc tgaataacag ttcgaataac acccattaac
      541 aatttgtttc gttcttcttc tcgagttcag tcatcggcat tttaaccgac cgccggacct
      601 caccactgat tcgtcaagac cttagttaat cgtgccgatt atattcgtcg gaggccatcc
      661 tcgttcttaa tcaccgattc aggctgcctt gttgatttgc atcgcagatg tcttctcatt
      721 catcatgtta accctaatat gctatagatc gattcaggtc aacaagtatt agtgtattcc
      781 cctcattttt gtaacttccg aaggtataca tcactttcca cctgctaatt ctaatatgca
      841 attgtttagt tgatttcgtc tttatgtaat catgttattg ttaccttaat ttgaatagtt
      901 aaatatttct cattgtgtat gtaaaatcat actccgtata acttgaaaat atgatagcaa
      961 cagcaatagg aatcgaaatt cactagtgct ttttgaattt aattgaatgt atatattttg
     1021 attttgacta gaataagata agatggctag attgggacta cacaccagtt taggatgacc
     1081 gaatgctctc ttaagtctta agtaagatgg actcagttaa tgtattgaca gaataagaac
     1141 tacagtcacc tcagcccaat aagtcataac tcataagtaa acatgccctc agtgctctag
     1201 tgtagatttt cgtaaaatta ttactatatg tcacactgtt ccgtcatgta tattttttca
     1261 ggcggtctgt tataaatagt gttttctaat ccggtgaaac caaaggtaat atttcatata
     1321 gggaaagttg gatatgttcc aataaagaga tgagagatgt aaactttcat tctacgattt
     1381 aacaactcat gtattttaat ctcatatatt gttgtggaca aaattgtttc tatgtagtta
     1441 tggaatgcaa cgaggggagg cataacattt tgatggtatc tgattttttt tatccaaatt
     1501 ttgggggtgt ggagaatcac atctatctgt tatcactatg tttgcttaag cttggtcata
     1561 aggtggtagt tatgactcat gcttatgcaa accgttccgg ggttaggtac atgacaaatg
     1621 gtttaaaagt ttattacata ccttggaagc cgtttcttat gcaaaacact ttaccaacgt
     1681 tttatggaac actcccgatt gtaaggacga ttcttcttag agaaaagatc tcactagtac
     1741 acgggcatca agcattttca accctttgtc acgaagcttt aatgcacgca cgaacaatgg
     1801 gttataaagt catattcact gatcattcac tatatggttt tgctgatatt ggaagcattc
     1861 acatgaataa agtattacaa tttaccttag cagatgtaag tcaagccatt tgtgtctcac
     1921 atacaagtaa agaaaataca gttttgagat cagggttgcc acccgaaaag gtttatgtta
     1981 taccgaatgc tgtggataca actatgttta agcctgctac agtaagactt ggtatggatc
     2041 cgattgttat tgttgttgtt agtcgattgg tttatcgtaa gggtgcagat ctgcttgttg
     2101 aagttattcc tgaagtatgt cagttgtacc ctaatgtccg ctttatcatt ggaggagatg
     2161 gacccaagag agtaagatta gaagagatga gggaaaaaca ctctcttcaa gatcgagttg
     2221 aaatgttagg tgcggtccca catgctaaag tgcgatctgt tttgaactct ggccatatat
     2281 tcttgaacag ttctttaaca gaggcattct gtatagcaat actagaggct gctagttgtg
     2341 gattattgac agtgagtaca cgagttggtg gtgtaccaga ggttctacca gatgatatga
     2401 ttgttcttgc taaaccagat cctagggata tggtacatgc aattaagaag gcaatacgga
     2461 tacttcctca aattgatcca caagagatgc accttcgtat aaaaggcatg tatagttggc
     2521 acgatgttgc caaaagaaca gagattgtgt atgatcgtgc cttgagatgt tcgaatcaaa
     2581 ccttattgga aagactccct aggtacctta catgtggtgc tttggcaggc aaactttttt
     2641 gtctagttat gatcattgat ttcatattat ggcgactatt acaactgtgg cagcccgact
     2701 ctgaagttga ggtggtacct gatataaagc actcacagag caaacctgga tgagaaaatg
     2761 atcataggta cagttaccca ctacaaaggt tcattgatat tcgtattact aatcattaca
     2821 gcttaaaatt ttgtaatact tgctatccag taaataggca ctttagatat gaaatttacg
     2881 tctgaggagc agattataag tattttgatt cttgtagaac cggaaaaata tggcaagcaa
     2941 aggaagtatg tctgtaaaag tttcaactgt ccaacttttt gtagaattat tttatgttaa
     3001 aatcaatgat tttgtggtat gtatatgtcc atctcatgtt tatcatcctt taataagtat
     3061 ttgcaatgta aatttatctc atggttgctt ttgattgtta gaaa
//
LOCUS       XM_071886391            3079 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X3, mRNA.
ACCESSION   XM_071886391
VERSION     XM_071886391.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3079
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1364..2728
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X1"
                     /protein_id="XP_071742492.1"
                     /db_xref="GeneID:139904469"
                     /translation="MYFNLIYCCGQNCFYVVMECNEGRHNILMVSDFFYPNFGGVENH
                     IYLLSLCLLKLGHKVVVMTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTL
                     PIVRTILLREKISLVHGHQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMN
                     KVLQFTLADVSQAICVSHTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDP
                     IVIVVVSRLVYRKGADLLVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDR
                     VEMLGAVPHAKVRSVLNSGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP
                     DDMIVLAKPDPRDMVHAIKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRAL
                     RCSNQTLLERLPRYLTCGALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQ
                     SKPG"
     misc_feature    1439..2626
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1481..1483,2033..2041,2225..2227,2291..2293)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagagaggtg gctttgtctc tgtttcaagg
      241 attaaagatt gaagatcact ttcaaaattt tctgtcggat acccgaaatt tcggattcgg
      301 atatcggatg gccaaatcta ctctcccaaa tttcggatat ctcaaatttc ggatatccga
      361 atttccggtt ttgaaccccc catgcttgta attttcagta tataattatt attaaaaatc
      421 ttgttgcttt tcaggaaaaa gaaaaacctt aataacttgt gattgtctaa aatcgtcgat
      481 taatctgaat aacagttcga ataacaccca ttaacaattt gtttcgttct tcttctcgag
      541 ttcagtcatc ggcattttaa ccgaccgccg gacctcacca ctgattcgtc aagaccttag
      601 ttaatcgtgc cgattatatt cgtcggaggc catcctcgtt cttaatcacc gattcaggct
      661 gccttgttga tttgcatcgc agatgtcttc tcattcatca tgttaaccct aatatgctat
      721 agatcgattc aggtcaacaa gtattagtgt attcccctca tttttgtaac ttccgaaggt
      781 atacatcact ttccacctgc taattctaat atgcaattgt ttagttgatt tcgtctttat
      841 gtaatcatgt tattgttacc ttaatttgaa tagttaaata tttctcattg tgtatgtaaa
      901 atcatactcc gtataacttg aaaatatgat agcaacagca ataggaatcg aaattcacta
      961 gtgctttttg aatttaattg aatgtatata ttttgatttt gactagaata agataagatg
     1021 gctagattgg gactacacac cagtttagga tgaccgaatg ctctcttaag tcttaagtaa
     1081 gatggactca gttaatgtat tgacagaata agaactacag tcacctcagc ccaataagtc
     1141 ataactcata agtaaacatg ccctcagtgc tctagtgtag attttcgtaa aattattact
     1201 atatgtcaca ctgttccgtc atgtatattt tttcaggcgg tctgttataa atagtgtttt
     1261 ctaatccggt gaaaccaaag gtaatatttc atatagggaa agttggatat gttccaataa
     1321 agagatgaga gatgtaaact ttcattctac gatttaacaa ctcatgtatt ttaatctcat
     1381 atattgttgt ggacaaaatt gtttctatgt agttatggaa tgcaacgagg ggaggcataa
     1441 cattttgatg gtatctgatt ttttttatcc aaattttggg ggtgtggaga atcacatcta
     1501 tctgttatca ctatgtttgc ttaagcttgg tcataaggtg gtagttatga ctcatgctta
     1561 tgcaaaccgt tccggggtta ggtacatgac aaatggttta aaagtttatt acataccttg
     1621 gaagccgttt cttatgcaaa acactttacc aacgttttat ggaacactcc cgattgtaag
     1681 gacgattctt cttagagaaa agatctcact agtacacggg catcaagcat tttcaaccct
     1741 ttgtcacgaa gctttaatgc acgcacgaac aatgggttat aaagtcatat tcactgatca
     1801 ttcactatat ggttttgctg atattggaag cattcacatg aataaagtat tacaatttac
     1861 cttagcagat gtaagtcaag ccatttgtgt ctcacataca agtaaagaaa atacagtttt
     1921 gagatcaggg ttgccacccg aaaaggttta tgttataccg aatgctgtgg atacaactat
     1981 gtttaagcct gctacagtaa gacttggtat ggatccgatt gttattgttg ttgttagtcg
     2041 attggtttat cgtaagggtg cagatctgct tgttgaagtt attcctgaag tatgtcagtt
     2101 gtaccctaat gtccgcttta tcattggagg agatggaccc aagagagtaa gattagaaga
     2161 gatgagggaa aaacactctc ttcaagatcg agttgaaatg ttaggtgcgg tcccacatgc
     2221 taaagtgcga tctgttttga actctggcca tatattcttg aacagttctt taacagaggc
     2281 attctgtata gcaatactag aggctgctag ttgtggatta ttgacagtga gtacacgagt
     2341 tggtggtgta ccagaggttc taccagatga tatgattgtt cttgctaaac cagatcctag
     2401 ggatatggta catgcaatta agaaggcaat acggatactt cctcaaattg atccacaaga
     2461 gatgcacctt cgtataaaag gcatgtatag ttggcacgat gttgccaaaa gaacagagat
     2521 tgtgtatgat cgtgccttga gatgttcgaa tcaaacctta ttggaaagac tccctaggta
     2581 ccttacatgt ggtgctttgg caggcaaact tttttgtcta gttatgatca ttgatttcat
     2641 attatggcga ctattacaac tgtggcagcc cgactctgaa gttgaggtgg tacctgatat
     2701 aaagcactca cagagcaaac ctggatgaga aaatgatcat aggtacagtt acccactaca
     2761 aaggttcatt gatattcgta ttactaatca ttacagctta aaattttgta atacttgcta
     2821 tccagtaaat aggcacttta gatatgaaat ttacgtctga ggagcagatt ataagtattt
     2881 tgattcttgt agaaccggaa aaatatggca agcaaaggaa gtatgtctgt aaaagtttca
     2941 actgtccaac tttttgtaga attattttat gttaaaatca atgattttgt ggtatgtata
     3001 tgtccatctc atgtttatca tcctttaata agtatttgca atgtaaattt atctcatggt
     3061 tgcttttgat tgttagaaa
//
LOCUS       XM_071886392            2774 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X4, mRNA.
ACCESSION   XM_071886392
VERSION     XM_071886392.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2774
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2774
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1059..2423
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X1"
                     /protein_id="XP_071742493.1"
                     /db_xref="GeneID:139904469"
                     /translation="MYFNLIYCCGQNCFYVVMECNEGRHNILMVSDFFYPNFGGVENH
                     IYLLSLCLLKLGHKVVVMTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTL
                     PIVRTILLREKISLVHGHQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMN
                     KVLQFTLADVSQAICVSHTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDP
                     IVIVVVSRLVYRKGADLLVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDR
                     VEMLGAVPHAKVRSVLNSGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP
                     DDMIVLAKPDPRDMVHAIKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRAL
                     RCSNQTLLERLPRYLTCGALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQ
                     SKPG"
     misc_feature    1134..2321
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1176..1178,1728..1736,1920..1922,1986..1988)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 tcatcggcat tttaaccgac cgccggacct caccactgat tcgtcaagac cttagttaat
      301 cgtgccgatt atattcgtcg gaggccatcc tcgttcttaa tcaccgattc aggctgcctt
      361 gttgatttgc atcgcagatg tcttctcatt catcatgtta accctaatat gctatagatc
      421 gattcaggtc aacaagtatt agtgtattcc cctcattttt gtaacttccg aaggtataca
      481 tcactttcca cctgctaatt ctaatatgca attgtttagt tgatttcgtc tttatgtaat
      541 catgttattg ttaccttaat ttgaatagtt aaatatttct cattgtgtat gtaaaatcat
      601 actccgtata acttgaaaat atgatagcaa cagcaatagg aatcgaaatt cactagtgct
      661 ttttgaattt aattgaatgt atatattttg attttgacta gaataagata agatggctag
      721 attgggacta cacaccagtt taggatgacc gaatgctctc ttaagtctta agtaagatgg
      781 actcagttaa tgtattgaca gaataagaac tacagtcacc tcagcccaat aagtcataac
      841 tcataagtaa acatgccctc agtgctctag tgtagatttt cgtaaaatta ttactatatg
      901 tcacactgtt ccgtcatgta tattttttca ggcggtctgt tataaatagt gttttctaat
      961 ccggtgaaac caaaggtaat atttcatata gggaaagttg gatatgttcc aataaagaga
     1021 tgagagatgt aaactttcat tctacgattt aacaactcat gtattttaat ctcatatatt
     1081 gttgtggaca aaattgtttc tatgtagtta tggaatgcaa cgaggggagg cataacattt
     1141 tgatggtatc tgattttttt tatccaaatt ttgggggtgt ggagaatcac atctatctgt
     1201 tatcactatg tttgcttaag cttggtcata aggtggtagt tatgactcat gcttatgcaa
     1261 accgttccgg ggttaggtac atgacaaatg gtttaaaagt ttattacata ccttggaagc
     1321 cgtttcttat gcaaaacact ttaccaacgt tttatggaac actcccgatt gtaaggacga
     1381 ttcttcttag agaaaagatc tcactagtac acgggcatca agcattttca accctttgtc
     1441 acgaagcttt aatgcacgca cgaacaatgg gttataaagt catattcact gatcattcac
     1501 tatatggttt tgctgatatt ggaagcattc acatgaataa agtattacaa tttaccttag
     1561 cagatgtaag tcaagccatt tgtgtctcac atacaagtaa agaaaataca gttttgagat
     1621 cagggttgcc acccgaaaag gtttatgtta taccgaatgc tgtggataca actatgttta
     1681 agcctgctac agtaagactt ggtatggatc cgattgttat tgttgttgtt agtcgattgg
     1741 tttatcgtaa gggtgcagat ctgcttgttg aagttattcc tgaagtatgt cagttgtacc
     1801 ctaatgtccg ctttatcatt ggaggagatg gacccaagag agtaagatta gaagagatga
     1861 gggaaaaaca ctctcttcaa gatcgagttg aaatgttagg tgcggtccca catgctaaag
     1921 tgcgatctgt tttgaactct ggccatatat tcttgaacag ttctttaaca gaggcattct
     1981 gtatagcaat actagaggct gctagttgtg gattattgac agtgagtaca cgagttggtg
     2041 gtgtaccaga ggttctacca gatgatatga ttgttcttgc taaaccagat cctagggata
     2101 tggtacatgc aattaagaag gcaatacgga tacttcctca aattgatcca caagagatgc
     2161 accttcgtat aaaaggcatg tatagttggc acgatgttgc caaaagaaca gagattgtgt
     2221 atgatcgtgc cttgagatgt tcgaatcaaa ccttattgga aagactccct aggtacctta
     2281 catgtggtgc tttggcaggc aaactttttt gtctagttat gatcattgat ttcatattat
     2341 ggcgactatt acaactgtgg cagcccgact ctgaagttga ggtggtacct gatataaagc
     2401 actcacagag caaacctgga tgagaaaatg atcataggta cagttaccca ctacaaaggt
     2461 tcattgatat tcgtattact aatcattaca gcttaaaatt ttgtaatact tgctatccag
     2521 taaataggca ctttagatat gaaatttacg tctgaggagc agattataag tattttgatt
     2581 cttgtagaac cggaaaaata tggcaagcaa aggaagtatg tctgtaaaag tttcaactgt
     2641 ccaacttttt gtagaattat tttatgttaa aatcaatgat tttgtggtat gtatatgtcc
     2701 atctcatgtt tatcatcctt taataagtat ttgcaatgta aatttatctc atggttgctt
     2761 ttgattgtta gaaa
//
LOCUS       XM_071886393            2749 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X5, mRNA.
ACCESSION   XM_071886393
VERSION     XM_071886393.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2749
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1034..2398
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X1"
                     /protein_id="XP_071742494.1"
                     /db_xref="GeneID:139904469"
                     /translation="MYFNLIYCCGQNCFYVVMECNEGRHNILMVSDFFYPNFGGVENH
                     IYLLSLCLLKLGHKVVVMTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTL
                     PIVRTILLREKISLVHGHQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMN
                     KVLQFTLADVSQAICVSHTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDP
                     IVIVVVSRLVYRKGADLLVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDR
                     VEMLGAVPHAKVRSVLNSGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP
                     DDMIVLAKPDPRDMVHAIKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRAL
                     RCSNQTLLERLPRYLTCGALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQ
                     SKPG"
     misc_feature    1109..2296
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1151..1153,1703..1711,1895..1897,1961..1963)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagagtcatc ggcattttaa ccgaccgccg
      241 gacctcacca ctgattcgtc aagaccttag ttaatcgtgc cgattatatt cgtcggaggc
      301 catcctcgtt cttaatcacc gattcaggct gccttgttga tttgcatcgc agatgtcttc
      361 tcattcatca tgttaaccct aatatgctat agatcgattc aggtcaacaa gtattagtgt
      421 attcccctca tttttgtaac ttccgaaggt atacatcact ttccacctgc taattctaat
      481 atgcaattgt ttagttgatt tcgtctttat gtaatcatgt tattgttacc ttaatttgaa
      541 tagttaaata tttctcattg tgtatgtaaa atcatactcc gtataacttg aaaatatgat
      601 agcaacagca ataggaatcg aaattcacta gtgctttttg aatttaattg aatgtatata
      661 ttttgatttt gactagaata agataagatg gctagattgg gactacacac cagtttagga
      721 tgaccgaatg ctctcttaag tcttaagtaa gatggactca gttaatgtat tgacagaata
      781 agaactacag tcacctcagc ccaataagtc ataactcata agtaaacatg ccctcagtgc
      841 tctagtgtag attttcgtaa aattattact atatgtcaca ctgttccgtc atgtatattt
      901 tttcaggcgg tctgttataa atagtgtttt ctaatccggt gaaaccaaag gtaatatttc
      961 atatagggaa agttggatat gttccaataa agagatgaga gatgtaaact ttcattctac
     1021 gatttaacaa ctcatgtatt ttaatctcat atattgttgt ggacaaaatt gtttctatgt
     1081 agttatggaa tgcaacgagg ggaggcataa cattttgatg gtatctgatt ttttttatcc
     1141 aaattttggg ggtgtggaga atcacatcta tctgttatca ctatgtttgc ttaagcttgg
     1201 tcataaggtg gtagttatga ctcatgctta tgcaaaccgt tccggggtta ggtacatgac
     1261 aaatggttta aaagtttatt acataccttg gaagccgttt cttatgcaaa acactttacc
     1321 aacgttttat ggaacactcc cgattgtaag gacgattctt cttagagaaa agatctcact
     1381 agtacacggg catcaagcat tttcaaccct ttgtcacgaa gctttaatgc acgcacgaac
     1441 aatgggttat aaagtcatat tcactgatca ttcactatat ggttttgctg atattggaag
     1501 cattcacatg aataaagtat tacaatttac cttagcagat gtaagtcaag ccatttgtgt
     1561 ctcacataca agtaaagaaa atacagtttt gagatcaggg ttgccacccg aaaaggttta
     1621 tgttataccg aatgctgtgg atacaactat gtttaagcct gctacagtaa gacttggtat
     1681 ggatccgatt gttattgttg ttgttagtcg attggtttat cgtaagggtg cagatctgct
     1741 tgttgaagtt attcctgaag tatgtcagtt gtaccctaat gtccgcttta tcattggagg
     1801 agatggaccc aagagagtaa gattagaaga gatgagggaa aaacactctc ttcaagatcg
     1861 agttgaaatg ttaggtgcgg tcccacatgc taaagtgcga tctgttttga actctggcca
     1921 tatattcttg aacagttctt taacagaggc attctgtata gcaatactag aggctgctag
     1981 ttgtggatta ttgacagtga gtacacgagt tggtggtgta ccagaggttc taccagatga
     2041 tatgattgtt cttgctaaac cagatcctag ggatatggta catgcaatta agaaggcaat
     2101 acggatactt cctcaaattg atccacaaga gatgcacctt cgtataaaag gcatgtatag
     2161 ttggcacgat gttgccaaaa gaacagagat tgtgtatgat cgtgccttga gatgttcgaa
     2221 tcaaacctta ttggaaagac tccctaggta ccttacatgt ggtgctttgg caggcaaact
     2281 tttttgtcta gttatgatca ttgatttcat attatggcga ctattacaac tgtggcagcc
     2341 cgactctgaa gttgaggtgg tacctgatat aaagcactca cagagcaaac ctggatgaga
     2401 aaatgatcat aggtacagtt acccactaca aaggttcatt gatattcgta ttactaatca
     2461 ttacagctta aaattttgta atacttgcta tccagtaaat aggcacttta gatatgaaat
     2521 ttacgtctga ggagcagatt ataagtattt tgattcttgt agaaccggaa aaatatggca
     2581 agcaaaggaa gtatgtctgt aaaagtttca actgtccaac tttttgtaga attattttat
     2641 gttaaaatca atgattttgt ggtatgtata tgtccatctc atgtttatca tcctttaata
     2701 agtatttgca atgtaaattt atctcatggt tgcttttgat tgttagaaa
//
LOCUS       XM_071886394            3278 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X6, mRNA.
ACCESSION   XM_071886394
VERSION     XM_071886394.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3278
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3278
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1645..3009
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X1"
                     /protein_id="XP_071742495.1"
                     /db_xref="GeneID:139904469"
                     /translation="MYFNLIYCCGQNCFYVVMECNEGRHNILMVSDFFYPNFGGVENH
                     IYLLSLCLLKLGHKVVVMTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTL
                     PIVRTILLREKISLVHGHQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMN
                     KVLQFTLADVSQAICVSHTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDP
                     IVIVVVSRLVYRKGADLLVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDR
                     VEMLGAVPHAKVRSVLNSGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP
                     DDMIVLAKPDPRDMVHAIKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRAL
                     RCSNQTLLERLPRYLTCGALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQ
                     SKPG"
     misc_feature    1720..2907
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1762..1764,2314..2322,2506..2508,2572..2574)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg tatacatcac tttccacctg
     1081 ctaattctaa tatgcaattg tttagttgat ttcgtcttta tgtaatcatg ttattgttac
     1141 cttaatttga atagttaaat atttctcatt gtgtatgtaa aatcatactc cgtataactt
     1201 gaaaatatga tagcaacagc aataggaatc gaaattcact agtgcttttt gaatttaatt
     1261 gaatgtatat attttgattt tgactagaat aagataagat ggctagattg ggactacaca
     1321 ccagtttagg atgaccgaat gctctcttaa gtcttaagta agatggactc agttaatgta
     1381 ttgacagaat aagaactaca gtcacctcag cccaataagt cataactcat aagtaaacat
     1441 gccctcagtg ctctagtgta gattttcgta aaattattac tatatgtcac actgttccgt
     1501 catgtatatt ttttcaggcg gtctgttata aatagtgttt tctaatccgg tgaaaccaaa
     1561 ggtaatattt catataggga aagttggata tgttccaata aagagatgag agatgtaaac
     1621 tttcattcta cgatttaaca actcatgtat tttaatctca tatattgttg tggacaaaat
     1681 tgtttctatg tagttatgga atgcaacgag gggaggcata acattttgat ggtatctgat
     1741 tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc actatgtttg
     1801 cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg ttccggggtt
     1861 aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt tcttatgcaa
     1921 aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct tcttagagaa
     1981 aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga agctttaatg
     2041 cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata tggttttgct
     2101 gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga tgtaagtcaa
     2161 gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg gttgccaccc
     2221 gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc tgctacagta
     2281 agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta tcgtaagggt
     2341 gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa tgtccgcttt
     2401 atcattggag gagatggacc caagagagta agattagaag agatgaggga aaaacactct
     2461 cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg atctgttttg
     2521 aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat agcaatacta
     2581 gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt accagaggtt
     2641 ctaccagatg atatgattgt tcttgctaaa ccagatccta gggatatggt acatgcaatt
     2701 aagaaggcaa tacggatact tcctcaaatt gatccacaag agatgcacct tcgtataaaa
     2761 ggcatgtata gttggcacga tgttgccaaa agaacagaga ttgtgtatga tcgtgccttg
     2821 agatgttcga atcaaacctt attggaaaga ctccctaggt accttacatg tggtgctttg
     2881 gcaggcaaac ttttttgtct agttatgatc attgatttca tattatggcg actattacaa
     2941 ctgtggcagc ccgactctga agttgaggtg gtacctgata taaagcactc acagagcaaa
     3001 cctggatgag aaaatgatca tagtaaatag gcactttaga tatgaaattt acgtctgagg
     3061 agcagattat aagtattttg attcttgtag aaccggaaaa atatggcaag caaaggaagt
     3121 atgtctgtaa aagtttcaac tgtccaactt tttgtagaat tattttatgt taaaatcaat
     3181 gattttgtgg tatgtatatg tccatctcat gtttatcatc ctttaataag tatttgcaat
     3241 gtaaatttat ctcatggttg cttttgattg ttagaaaa
//
LOCUS       XM_071886395            3211 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X7, mRNA.
ACCESSION   XM_071886395
VERSION     XM_071886395.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3211
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3211
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1645..3009
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X1"
                     /protein_id="XP_071742496.1"
                     /db_xref="GeneID:139904469"
                     /translation="MYFNLIYCCGQNCFYVVMECNEGRHNILMVSDFFYPNFGGVENH
                     IYLLSLCLLKLGHKVVVMTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTL
                     PIVRTILLREKISLVHGHQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMN
                     KVLQFTLADVSQAICVSHTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDP
                     IVIVVVSRLVYRKGADLLVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDR
                     VEMLGAVPHAKVRSVLNSGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP
                     DDMIVLAKPDPRDMVHAIKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRAL
                     RCSNQTLLERLPRYLTCGALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQ
                     SKPG"
     misc_feature    1720..2907
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1762..1764,2314..2322,2506..2508,2572..2574)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg tatacatcac tttccacctg
     1081 ctaattctaa tatgcaattg tttagttgat ttcgtcttta tgtaatcatg ttattgttac
     1141 cttaatttga atagttaaat atttctcatt gtgtatgtaa aatcatactc cgtataactt
     1201 gaaaatatga tagcaacagc aataggaatc gaaattcact agtgcttttt gaatttaatt
     1261 gaatgtatat attttgattt tgactagaat aagataagat ggctagattg ggactacaca
     1321 ccagtttagg atgaccgaat gctctcttaa gtcttaagta agatggactc agttaatgta
     1381 ttgacagaat aagaactaca gtcacctcag cccaataagt cataactcat aagtaaacat
     1441 gccctcagtg ctctagtgta gattttcgta aaattattac tatatgtcac actgttccgt
     1501 catgtatatt ttttcaggcg gtctgttata aatagtgttt tctaatccgg tgaaaccaaa
     1561 ggtaatattt catataggga aagttggata tgttccaata aagagatgag agatgtaaac
     1621 tttcattcta cgatttaaca actcatgtat tttaatctca tatattgttg tggacaaaat
     1681 tgtttctatg tagttatgga atgcaacgag gggaggcata acattttgat ggtatctgat
     1741 tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc actatgtttg
     1801 cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg ttccggggtt
     1861 aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt tcttatgcaa
     1921 aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct tcttagagaa
     1981 aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga agctttaatg
     2041 cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata tggttttgct
     2101 gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga tgtaagtcaa
     2161 gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg gttgccaccc
     2221 gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc tgctacagta
     2281 agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta tcgtaagggt
     2341 gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa tgtccgcttt
     2401 atcattggag gagatggacc caagagagta agattagaag agatgaggga aaaacactct
     2461 cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg atctgttttg
     2521 aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat agcaatacta
     2581 gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt accagaggtt
     2641 ctaccagatg atatgattgt tcttgctaaa ccagatccta gggatatggt acatgcaatt
     2701 aagaaggcaa tacggatact tcctcaaatt gatccacaag agatgcacct tcgtataaaa
     2761 ggcatgtata gttggcacga tgttgccaaa agaacagaga ttgtgtatga tcgtgccttg
     2821 agatgttcga atcaaacctt attggaaaga ctccctaggt accttacatg tggtgctttg
     2881 gcaggcaaac ttttttgtct agttatgatc attgatttca tattatggcg actattacaa
     2941 ctgtggcagc ccgactctga agttgaggtg gtacctgata taaagcactc acagagcaaa
     3001 cctggatgag aaaatgatca tagaaccgga aaaatatggc aagcaaagga agtatgtctg
     3061 taaaagtttc aactgtccaa ctttttgtag aattatttta tgttaaaatc aatgattttg
     3121 tggtatgtat atgtccatct catgtttatc atcctttaat aagtatttgc aatgtaaatt
     3181 tatctcatgg ttgcttttga ttgttagaaa a
//
LOCUS       XM_071886396            2726 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X8, mRNA.
ACCESSION   XM_071886396
VERSION     XM_071886396.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2726
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1062..2375
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X2"
                     /protein_id="XP_071742497.1"
                     /db_xref="GeneID:139904469"
                     /translation="MECNEGRHNILMVSDFFYPNFGGVENHIYLLSLCLLKLGHKVVV
                     MTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTLPIVRTILLREKISLVHG
                     HQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMNKVLQFTLADVSQAICVS
                     HTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDPIVIVVVSRLVYRKGADL
                     LVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAKVRSVLN
                     SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAKPDPRDMVHA
                     IKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRALRCSNQTLLERLPRYLTC
                     GALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQSKPG"
     misc_feature    1086..2273
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1128..1130,1680..1688,1872..1874,1938..1940)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagt tatggaatgc aacgagggga
     1081 ggcataacat tttgatggta tctgattttt tttatccaaa ttttgggggt gtggagaatc
     1141 acatctatct gttatcacta tgtttgctta agcttggtca taaggtggta gttatgactc
     1201 atgcttatgc aaaccgttcc ggggttaggt acatgacaaa tggtttaaaa gtttattaca
     1261 taccttggaa gccgtttctt atgcaaaaca ctttaccaac gttttatgga acactcccga
     1321 ttgtaaggac gattcttctt agagaaaaga tctcactagt acacgggcat caagcatttt
     1381 caaccctttg tcacgaagct ttaatgcacg cacgaacaat gggttataaa gtcatattca
     1441 ctgatcattc actatatggt tttgctgata ttggaagcat tcacatgaat aaagtattac
     1501 aatttacctt agcagatgta agtcaagcca tttgtgtctc acatacaagt aaagaaaata
     1561 cagttttgag atcagggttg ccacccgaaa aggtttatgt tataccgaat gctgtggata
     1621 caactatgtt taagcctgct acagtaagac ttggtatgga tccgattgtt attgttgttg
     1681 ttagtcgatt ggtttatcgt aagggtgcag atctgcttgt tgaagttatt cctgaagtat
     1741 gtcagttgta ccctaatgtc cgctttatca ttggaggaga tggacccaag agagtaagat
     1801 tagaagagat gagggaaaaa cactctcttc aagatcgagt tgaaatgtta ggtgcggtcc
     1861 cacatgctaa agtgcgatct gttttgaact ctggccatat attcttgaac agttctttaa
     1921 cagaggcatt ctgtatagca atactagagg ctgctagttg tggattattg acagtgagta
     1981 cacgagttgg tggtgtacca gaggttctac cagatgatat gattgttctt gctaaaccag
     2041 atcctaggga tatggtacat gcaattaaga aggcaatacg gatacttcct caaattgatc
     2101 cacaagagat gcaccttcgt ataaaaggca tgtatagttg gcacgatgtt gccaaaagaa
     2161 cagagattgt gtatgatcgt gccttgagat gttcgaatca aaccttattg gaaagactcc
     2221 ctaggtacct tacatgtggt gctttggcag gcaaactttt ttgtctagtt atgatcattg
     2281 atttcatatt atggcgacta ttacaactgt ggcagcccga ctctgaagtt gaggtggtac
     2341 ctgatataaa gcactcacag agcaaacctg gatgagaaaa tgatcatagg tacagttacc
     2401 cactacaaag gttcattgat attcgtatta ctaatcatta cagcttaaaa ttttgtaata
     2461 cttgctatcc agtaaatagg cactttagat atgaaattta cgtctgagga gcagattata
     2521 agtattttga ttcttgtaga accggaaaaa tatggcaagc aaaggaagta tgtctgtaaa
     2581 agtttcaact gtccaacttt ttgtagaatt attttatgtt aaaatcaatg attttgtggt
     2641 atgtatatgt ccatctcatg tttatcatcc tttaataagt atttgcaatg taaatttatc
     2701 tcatggttgc ttttgattgt tagaaa
//
LOCUS       XM_071886398            2770 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X9, mRNA.
ACCESSION   XM_071886398
VERSION     XM_071886398.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2770
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1106..2419
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X2"
                     /protein_id="XP_071742499.1"
                     /db_xref="GeneID:139904469"
                     /translation="MECNEGRHNILMVSDFFYPNFGGVENHIYLLSLCLLKLGHKVVV
                     MTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTLPIVRTILLREKISLVHG
                     HQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMNKVLQFTLADVSQAICVS
                     HTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDPIVIVVVSRLVYRKGADL
                     LVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAKVRSVLN
                     SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAKPDPRDMVHA
                     IKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRALRCSNQTLLERLPRYLTC
                     GALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQSKPG"
     misc_feature    1130..2317
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1172..1174,1724..1732,1916..1918,1982..1984)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg cggtctgtta taaatagtgt
     1081 tttctaatcc ggtgaaacca aagttatgga atgcaacgag gggaggcata acattttgat
     1141 ggtatctgat tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc
     1201 actatgtttg cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg
     1261 ttccggggtt aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt
     1321 tcttatgcaa aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct
     1381 tcttagagaa aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga
     1441 agctttaatg cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata
     1501 tggttttgct gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga
     1561 tgtaagtcaa gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg
     1621 gttgccaccc gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc
     1681 tgctacagta agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta
     1741 tcgtaagggt gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa
     1801 tgtccgcttt atcattggag gagatggacc caagagagta agattagaag agatgaggga
     1861 aaaacactct cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg
     1921 atctgttttg aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat
     1981 agcaatacta gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt
     2041 accagaggtt ctaccagatg atatgattgt tcttgctaaa ccagatccta gggatatggt
     2101 acatgcaatt aagaaggcaa tacggatact tcctcaaatt gatccacaag agatgcacct
     2161 tcgtataaaa ggcatgtata gttggcacga tgttgccaaa agaacagaga ttgtgtatga
     2221 tcgtgccttg agatgttcga atcaaacctt attggaaaga ctccctaggt accttacatg
     2281 tggtgctttg gcaggcaaac ttttttgtct agttatgatc attgatttca tattatggcg
     2341 actattacaa ctgtggcagc ccgactctga agttgaggtg gtacctgata taaagcactc
     2401 acagagcaaa cctggatgag aaaatgatca taggtacagt tacccactac aaaggttcat
     2461 tgatattcgt attactaatc attacagctt aaaattttgt aatacttgct atccagtaaa
     2521 taggcacttt agatatgaaa tttacgtctg aggagcagat tataagtatt ttgattcttg
     2581 tagaaccgga aaaatatggc aagcaaagga agtatgtctg taaaagtttc aactgtccaa
     2641 ctttttgtag aattatttta tgttaaaatc aatgattttg tggtatgtat atgtccatct
     2701 catgtttatc atcctttaat aagtatttgc aatgtaaatt tatctcatgg ttgcttttga
     2761 ttgttagaaa
//
LOCUS       XM_071886399            1907 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X10, mRNA.
ACCESSION   XM_071886399
VERSION     XM_071886399.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1907
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             243..1556
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X2"
                     /protein_id="XP_071742500.1"
                     /db_xref="GeneID:139904469"
                     /translation="MECNEGRHNILMVSDFFYPNFGGVENHIYLLSLCLLKLGHKVVV
                     MTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTLPIVRTILLREKISLVHG
                     HQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMNKVLQFTLADVSQAICVS
                     HTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDPIVIVVVSRLVYRKGADL
                     LVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAKVRSVLN
                     SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAKPDPRDMVHA
                     IKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRALRCSNQTLLERLPRYLTC
                     GALAGKLFCLVMIIDFILWRLLQLWQPDSEVEVVPDIKHSQSKPG"
     misc_feature    267..1454
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(309..311,861..869,1053..1055,1119..1121)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 ttatggaatg caacgagggg aggcataaca ttttgatggt atctgatttt ttttatccaa
      301 attttggggg tgtggagaat cacatctatc tgttatcact atgtttgctt aagcttggtc
      361 ataaggtggt agttatgact catgcttatg caaaccgttc cggggttagg tacatgacaa
      421 atggtttaaa agtttattac ataccttgga agccgtttct tatgcaaaac actttaccaa
      481 cgttttatgg aacactcccg attgtaagga cgattcttct tagagaaaag atctcactag
      541 tacacgggca tcaagcattt tcaacccttt gtcacgaagc tttaatgcac gcacgaacaa
      601 tgggttataa agtcatattc actgatcatt cactatatgg ttttgctgat attggaagca
      661 ttcacatgaa taaagtatta caatttacct tagcagatgt aagtcaagcc atttgtgtct
      721 cacatacaag taaagaaaat acagttttga gatcagggtt gccacccgaa aaggtttatg
      781 ttataccgaa tgctgtggat acaactatgt ttaagcctgc tacagtaaga cttggtatgg
      841 atccgattgt tattgttgtt gttagtcgat tggtttatcg taagggtgca gatctgcttg
      901 ttgaagttat tcctgaagta tgtcagttgt accctaatgt ccgctttatc attggaggag
      961 atggacccaa gagagtaaga ttagaagaga tgagggaaaa acactctctt caagatcgag
     1021 ttgaaatgtt aggtgcggtc ccacatgcta aagtgcgatc tgttttgaac tctggccata
     1081 tattcttgaa cagttcttta acagaggcat tctgtatagc aatactagag gctgctagtt
     1141 gtggattatt gacagtgagt acacgagttg gtggtgtacc agaggttcta ccagatgata
     1201 tgattgttct tgctaaacca gatcctaggg atatggtaca tgcaattaag aaggcaatac
     1261 ggatacttcc tcaaattgat ccacaagaga tgcaccttcg tataaaaggc atgtatagtt
     1321 ggcacgatgt tgccaaaaga acagagattg tgtatgatcg tgccttgaga tgttcgaatc
     1381 aaaccttatt ggaaagactc cctaggtacc ttacatgtgg tgctttggca ggcaaacttt
     1441 tttgtctagt tatgatcatt gatttcatat tatggcgact attacaactg tggcagcccg
     1501 actctgaagt tgaggtggta cctgatataa agcactcaca gagcaaacct ggatgagaaa
     1561 atgatcatag gtacagttac ccactacaaa ggttcattga tattcgtatt actaatcatt
     1621 acagcttaaa attttgtaat acttgctatc cagtaaatag gcactttaga tatgaaattt
     1681 acgtctgagg agcagattat aagtattttg attcttgtag aaccggaaaa atatggcaag
     1741 caaaggaagt atgtctgtaa aagtttcaac tgtccaactt tttgtagaat tattttatgt
     1801 taaaatcaat gattttgtgg tatgtatatg tccatctcat gtttatcatc ctttaataag
     1861 tatttgcaat gtaaatttat ctcatggttg cttttgattg ttagaaa
//
LOCUS       XM_071886400            3336 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X11, mRNA.
ACCESSION   XM_071886400
VERSION     XM_071886400.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3336
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904469"
     CDS             1645..2889
                     /gene="LOC139904469"
                     /codon_start=1
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A isoform X3"
                     /protein_id="XP_071742501.1"
                     /db_xref="GeneID:139904469"
                     /translation="MYFNLIYCCGQNCFYVVMECNEGRHNILMVSDFFYPNFGGVENH
                     IYLLSLCLLKLGHKVVVMTHAYANRSGVRYMTNGLKVYYIPWKPFLMQNTLPTFYGTL
                     PIVRTILLREKISLVHGHQAFSTLCHEALMHARTMGYKVIFTDHSLYGFADIGSIHMN
                     KVLQFTLADVSQAICVSHTSKENTVLRSGLPPEKVYVIPNAVDTTMFKPATVRLGMDP
                     IVIVVVSRLVYRKGADLLVEVIPEVCQLYPNVRFIIGGDGPKRVRLEEMREKHSLQDR
                     VEMLGAVPHAKVRSVLNSGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP
                     DDMIVLAKPDPRDMVHAIKKAIRILPQIDPQEMHLRIKGMYSWHDVAKRTEIVYDRAL
                     RCSNQTLLERLPRQTFLSSYDH"
     misc_feature    1720..2859
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A and similar
                     proteins; Region: GT4_PIG-A-like; cd03796"
                     /db_xref="CDD:340827"
     misc_feature    order(1762..1764,2314..2322,2506..2508,2572..2574)
                     /gene="LOC139904469"
                     /note="putative ADP-binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:340827"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg tatacatcac tttccacctg
     1081 ctaattctaa tatgcaattg tttagttgat ttcgtcttta tgtaatcatg ttattgttac
     1141 cttaatttga atagttaaat atttctcatt gtgtatgtaa aatcatactc cgtataactt
     1201 gaaaatatga tagcaacagc aataggaatc gaaattcact agtgcttttt gaatttaatt
     1261 gaatgtatat attttgattt tgactagaat aagataagat ggctagattg ggactacaca
     1321 ccagtttagg atgaccgaat gctctcttaa gtcttaagta agatggactc agttaatgta
     1381 ttgacagaat aagaactaca gtcacctcag cccaataagt cataactcat aagtaaacat
     1441 gccctcagtg ctctagtgta gattttcgta aaattattac tatatgtcac actgttccgt
     1501 catgtatatt ttttcaggcg gtctgttata aatagtgttt tctaatccgg tgaaaccaaa
     1561 ggtaatattt catataggga aagttggata tgttccaata aagagatgag agatgtaaac
     1621 tttcattcta cgatttaaca actcatgtat tttaatctca tatattgttg tggacaaaat
     1681 tgtttctatg tagttatgga atgcaacgag gggaggcata acattttgat ggtatctgat
     1741 tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc actatgtttg
     1801 cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg ttccggggtt
     1861 aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt tcttatgcaa
     1921 aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct tcttagagaa
     1981 aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga agctttaatg
     2041 cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata tggttttgct
     2101 gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga tgtaagtcaa
     2161 gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg gttgccaccc
     2221 gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc tgctacagta
     2281 agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta tcgtaagggt
     2341 gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa tgtccgcttt
     2401 atcattggag gagatggacc caagagagta agattagaag agatgaggga aaaacactct
     2461 cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg atctgttttg
     2521 aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat agcaatacta
     2581 gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt accagaggtt
     2641 ctaccagatg atatgattgt tcttgctaaa ccagatccta gggatatggt acatgcaatt
     2701 aagaaggcaa tacggatact tcctcaaatt gatccacaag agatgcacct tcgtataaaa
     2761 ggcatgtata gttggcacga tgttgccaaa agaacagaga ttgtgtatga tcgtgccttg
     2821 agatgttcga atcaaacctt attggaaaga ctccctaggc aaactttttt gtctagttat
     2881 gatcattgat ttcatattat ggcgactatt acaactgtgg cagcccgact ctgaagttga
     2941 ggtggtacct gatataaagc actcacagag caaacctgga tgagaaaatg atcataggta
     3001 cagttaccca ctacaaaggt tcattgatat tcgtattact aatcattaca gcttaaaatt
     3061 ttgtaatact tgctatccag taaataggca ctttagatat gaaatttacg tctgaggagc
     3121 agattataag tattttgatt cttgtagaac cggaaaaata tggcaagcaa aggaagtatg
     3181 tctgtaaaag tttcaactgt ccaacttttt gtagaattat tttatgttaa aatcaatgat
     3241 tttgtggtat gtatatgtcc atctcatgtt tatcatcctt taataagtat ttgcaatgta
     3301 aatttatctc atggttgctt ttgattgtta gaaaat
//
LOCUS       XR_011778812            3254 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X12, misc_RNA.
ACCESSION   XR_011778812
VERSION     XR_011778812.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3254
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904469"
     misc_RNA        1..3254
                     /gene="LOC139904469"
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A, transcript
                     variant X12"
                     /db_xref="GeneID:139904469"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg tatacatcac tttccacctg
     1081 ctaattctaa tatgcaattg tttagttgat ttcgtcttta tgtaatcatg ttattgttac
     1141 cttaatttga atagttaaat atttctcatt gtgtatgtaa aatcatactc cgtataactt
     1201 gaaaatatga tagcaacagc aataggaatc gaaattcact agtgcttttt gaatttaatt
     1261 gaatgtatat attttgattt tgactagaat aagataagat ggctagattg ggactacaca
     1321 ccagtttagg atgaccgaat gctctcttaa gtcttaagta agatggactc agttaatgta
     1381 ttgacagaat aagaactaca gtcacctcag cccaataagt cataactcat aagtaaacat
     1441 gccctcagtg ctctagtgta gattttcgta aaattattac tatatgtcac actgttccgt
     1501 catgtatatt ttttcaggcg gtctgttata aatagtgttt tctaatccgg tgaaaccaaa
     1561 ggtaatattt catataggga aagttggata tgttccaata aagagatgag agatgtaaac
     1621 tttcattcta cgatttaaca actcatgtat tttaatctca tatattgttg tggacaaaat
     1681 tgtttctatg tagttatgga atgcaacgag gggaggcata acattttgat ggtatctgat
     1741 tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc actatgtttg
     1801 cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg ttccggggtt
     1861 aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt tcttatgcaa
     1921 aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct tcttagagaa
     1981 aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga agctttaatg
     2041 cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata tggttttgct
     2101 gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga tgtaagtcaa
     2161 gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg gttgccaccc
     2221 gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc tgctacagta
     2281 agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta tcgtaagggt
     2341 gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa tgtccgcttt
     2401 atcattggag gagatggacc caagagagta agattagaag agatgaggga aaaacactct
     2461 cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg atctgttttg
     2521 aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat agcaatacta
     2581 gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt accagaggtt
     2641 ctaccagatg atatgattgt tcttgctaaa ccagatccta gggatatggt acatgcaatt
     2701 aagaaggcaa tacggatact tcctcaaatt gatccacaag agatgcacct tcgtataaaa
     2761 ggcatgtata gttggcacga tgttgccaaa agaacagaga ttgtgtatga tcgtgccttg
     2821 agatgttcga atcaaacctt attggaaaga ctccctaggc aaactttttt gtctagttat
     2881 gatcattgat ttcatattat ggcgactatt acaactgtgg cagcccgact ctgaagttga
     2941 ggtggtacct gatataaagc actcacagag caaacctgga tgagaaaatg atcatagtaa
     3001 ataggcactt tagatatgaa atttacgtct gaggagcaga ttataagtat tttgattctt
     3061 gtagaaccgg aaaaatatgg caagcaaagg aagtatgtct gtaaaagttt caactgtcca
     3121 actttttgta gaattatttt atgttaaaat caatgatttt gtggtatgta tatgtccatc
     3181 tcatgtttat catcctttaa taagtatttg caatgtaaat ttatctcatg gttgcttttg
     3241 attgttagaa aatt
//
LOCUS       XR_011778813            3187 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X13, misc_RNA.
ACCESSION   XR_011778813
VERSION     XR_011778813.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3187
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3187
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904469"
     misc_RNA        1..3187
                     /gene="LOC139904469"
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A, transcript
                     variant X13"
                     /db_xref="GeneID:139904469"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg tatacatcac tttccacctg
     1081 ctaattctaa tatgcaattg tttagttgat ttcgtcttta tgtaatcatg ttattgttac
     1141 cttaatttga atagttaaat atttctcatt gtgtatgtaa aatcatactc cgtataactt
     1201 gaaaatatga tagcaacagc aataggaatc gaaattcact agtgcttttt gaatttaatt
     1261 gaatgtatat attttgattt tgactagaat aagataagat ggctagattg ggactacaca
     1321 ccagtttagg atgaccgaat gctctcttaa gtcttaagta agatggactc agttaatgta
     1381 ttgacagaat aagaactaca gtcacctcag cccaataagt cataactcat aagtaaacat
     1441 gccctcagtg ctctagtgta gattttcgta aaattattac tatatgtcac actgttccgt
     1501 catgtatatt ttttcaggcg gtctgttata aatagtgttt tctaatccgg tgaaaccaaa
     1561 ggtaatattt catataggga aagttggata tgttccaata aagagatgag agatgtaaac
     1621 tttcattcta cgatttaaca actcatgtat tttaatctca tatattgttg tggacaaaat
     1681 tgtttctatg tagttatgga atgcaacgag gggaggcata acattttgat ggtatctgat
     1741 tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc actatgtttg
     1801 cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg ttccggggtt
     1861 aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt tcttatgcaa
     1921 aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct tcttagagaa
     1981 aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga agctttaatg
     2041 cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata tggttttgct
     2101 gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga tgtaagtcaa
     2161 gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg gttgccaccc
     2221 gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc tgctacagta
     2281 agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta tcgtaagggt
     2341 gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa tgtccgcttt
     2401 atcattggag gagatggacc caagagagta agattagaag agatgaggga aaaacactct
     2461 cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg atctgttttg
     2521 aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat agcaatacta
     2581 gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt accagaggtt
     2641 ctaccagatg atatgattgt tcttgctaaa ccagatccta gggatatggt acatgcaatt
     2701 aagaaggcaa tacggatact tcctcaaatt gatccacaag agatgcacct tcgtataaaa
     2761 ggcatgtata gttggcacga tgttgccaaa agaacagaga ttgtgtatga tcgtgccttg
     2821 agatgttcga atcaaacctt attggaaaga ctccctaggc aaactttttt gtctagttat
     2881 gatcattgat ttcatattat ggcgactatt acaactgtgg cagcccgact ctgaagttga
     2941 ggtggtacct gatataaagc actcacagag caaacctgga tgagaaaatg atcatagaac
     3001 cggaaaaata tggcaagcaa aggaagtatg tctgtaaaag tttcaactgt ccaacttttt
     3061 gtagaattat tttatgttaa aatcaatgat tttgtggtat gtatatgtcc atctcatgtt
     3121 tatcatcctt taataagtat ttgcaatgta aatttatctc atggttgctt ttgattgtta
     3181 gaaaatt
//
LOCUS       XR_011778814            2857 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X14, misc_RNA.
ACCESSION   XR_011778814
VERSION     XR_011778814.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2857
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2857
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904469"
     misc_RNA        1..2857
                     /gene="LOC139904469"
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A, transcript
                     variant X14"
                     /db_xref="GeneID:139904469"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg tatacatcac tttccacctg
     1081 ctaattctaa tatgcaattg tttagttgat ttcgtcttta tgtaatcatg ttattgttac
     1141 cttaatttga atagttaaat atttctcatt gtgtatgtaa aatcatactc cgtataactt
     1201 gaaaatatga tagcaacagc aataggaatc gaaattcact agtgcttttt gaatttaatt
     1261 gaatgtatat attttgattt tgactagaat aagataagat ggctagattg ggactacaca
     1321 ccagtttagg atgaccgaat gctctcttaa gtcttaagta agatggactc agttaatgta
     1381 ttgacagaat aagaactaca gtcacctcag cccaataagt cataactcat aagtaaacat
     1441 gccctcagtg ctctagtgta gattttcgta aaattattac tatatgtcac actgttccgt
     1501 catgtatatt ttttcaggcg gtctgttata aatagtgttt tctaatccgg tgaaaccaaa
     1561 ggtaatattt catataggga aagttggata tgttccaata aagagatgag agatgtaaac
     1621 tttcattcta cgatttaaca actcatgtat tttaatctca tatattgttg tggacaaaat
     1681 tgtttctatg tagttatgga atgcaacgag gggaggcata acattttgat ggtatctgat
     1741 tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc actatgtttg
     1801 cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg ttccggggtt
     1861 aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt tcttatgcaa
     1921 aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct tcttagagaa
     1981 aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga agctttaatg
     2041 cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata tggttttgct
     2101 gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga tgtaagtcaa
     2161 gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg gttgccaccc
     2221 gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc tgctacagta
     2281 agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta tcgtaagggt
     2341 gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa tgtccgcttt
     2401 atcattggag gagatggacc caagagagta agattagaag agatgaggga aaaacactct
     2461 cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg atctgttttg
     2521 aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat agcaatacta
     2581 gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt accagagatc
     2641 ctagggatat ggtacatgca attaagaagg caatacggat acttcctcaa attgatccac
     2701 aagagatgca ccttcgtata aaaggcatgt atagttggca cgatgttgcc aaaagaacag
     2761 agattgtgta tgatcgtgcc ttgagatgtt cgaatcaaac cttattggaa agactcccta
     2821 ggtaccttac atgtggtgct ttggcaggca aactttt
//
LOCUS       XR_011778815            2843 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            N-acetylglucosaminyltransferase subunit A (LOC139904469),
            transcript variant X15, misc_RNA.
ACCESSION   XR_011778815
VERSION     XR_011778815.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2843
                     /gene="LOC139904469"
                     /note="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904469"
     misc_RNA        1..2843
                     /gene="LOC139904469"
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit A, transcript
                     variant X15"
                     /db_xref="GeneID:139904469"
ORIGIN      
        1 ttttctacac ctcagatcat gagtctcgat atgatcttca tcccttcatc tcatcatcat
       61 tattatctat caagttaact cacatcacac ttctttctct agatctgaat tttagaattt
      121 gttaattaaa aaaaaaaaaa aaaaaaacaa aacaaatgag gtgacgatat gcaattgcaa
      181 atgaggagtg atcttagatt tgggagtttt tagaggtacg ccagttttgg tcaagtaagg
      241 gtaagtcacg atatgcaaag gactttgatt tgatgcatta taattttggg cgtattatat
      301 tttgtttgac cagtaatctt agttttggat gcaagtcaac aatatttttg aatttttgtt
      361 taatttcgaa cgtattatat ttttggttga gacttaactt gagagtatga ttagtctcat
      421 acagtttttg atgtagtttc caactcaatt ttgtgcttgc tatctaatta cttaatttta
      481 tctttttata taatagaggt ggctttgtct ctgtttcaag gattaaagat tgaagatcac
      541 tttcaaaatt ttctgtcgga tacccgaaat ttcggattcg gatatcggat ggccaaatct
      601 actctcccaa atttcggata tctcaaattt cggatatccg aatttccggt tttgaacccc
      661 ccatgcttgt aattttcagt atataattat tattaaaaat cttgttgctt ttcaggaaaa
      721 agaaaaacct taataacttg tgattgtcta aaatcgtcga ttaatctgaa taacagttcg
      781 aataacaccc attaacaatt tgtttcgttc ttcttctcga gttcagtcat cggcatttta
      841 accgaccgcc ggacctcacc actgattcgt caagacctta gttaatcgtg ccgattatat
      901 tcgtcggagg ccatcctcgt tcttaatcac cgattcaggc tgccttgttg atttgcatcg
      961 cagatgtctt ctcattcatc atgttaaccc taatatgcta tagatcgatt caggtcaaca
     1021 agtattagtg tattcccctc atttttgtaa cttccgaagg tatacatcac tttccacctg
     1081 ctaattctaa tatgcaattg tttagttgat ttcgtcttta tgtaatcatg ttattgttac
     1141 cttaatttga atagttaaat atttctcatt gtgtatgtaa aatcatactc cgtataactt
     1201 gaaaatatga tagcaacagc aataggaatc gaaattcact agtgcttttt gaatttaatt
     1261 gaatgtatat attttgattt tgactagaat aagataagat ggctagattg ggactacaca
     1321 ccagtttagg atgaccgaat gctctcttaa gtcttaagta agatggactc agttaatgta
     1381 ttgacagaat aagaactaca gtcacctcag cccaataagt cataactcat aagtaaacat
     1441 gccctcagtg ctctagtgta gattttcgta aaattattac tatatgtcac actgttccgt
     1501 catgtatatt ttttcaggcg gtctgttata aatagtgttt tctaatccgg tgaaaccaaa
     1561 ggtaatattt catataggga aagttggata tgttccaata aagagatgag agatgtaaac
     1621 tttcattcta cgatttaaca actcatgtat tttaatctca tatattgttg tggacaaaat
     1681 tgtttctatg tagttatgga atgcaacgag gggaggcata acattttgat ggtatctgat
     1741 tttttttatc caaattttgg gggtgtggag aatcacatct atctgttatc actatgtttg
     1801 cttaagcttg gtcataaggt ggtagttatg actcatgctt atgcaaaccg ttccggggtt
     1861 aggtacatga caaatggttt aaaagtttat tacatacctt ggaagccgtt tcttatgcaa
     1921 aacactttac caacgtttta tggaacactc ccgattgtaa ggacgattct tcttagagaa
     1981 aagatctcac tagtacacgg gcatcaagca ttttcaaccc tttgtcacga agctttaatg
     2041 cacgcacgaa caatgggtta taaagtcata ttcactgatc attcactata tggttttgct
     2101 gatattggaa gcattcacat gaataaagta ttacaattta ccttagcaga tgtaagtcaa
     2161 gccatttgtg tctcacatac aagtaaagaa aatacagttt tgagatcagg gttgccaccc
     2221 gaaaaggttt atgttatacc gaatgctgtg gatacaacta tgtttaagcc tgctacagta
     2281 agacttggta tggatccgat tgttattgtt gttgttagtc gattggttta tcgtaagggt
     2341 gcagatctgc ttgttgaagt tattcctgaa gtatgtcagt tgtaccctaa tgtccgcttt
     2401 atcattggag gagatggacc caagagagta agattagaag agatgaggga aaaacactct
     2461 cttcaagatc gagttgaaat gttaggtgcg gtcccacatg ctaaagtgcg atctgttttg
     2521 aactctggcc atatattctt gaacagttct ttaacagagg cattctgtat agcaatacta
     2581 gaggctgcta gttgtggatt attgacagtg agtacacgag ttggtggtgt accagagatc
     2641 ctagggatat ggtacatgca attaagaagg caatacggat acttcctcaa attgatccac
     2701 aagagatgca ccttcgtata aaaggcatgt atagttggca cgatgttgcc aaaagaacag
     2761 agattgtgta tgatcgtgcc ttgagatgtt cgaatcaaac cttattggaa agactcccta
     2821 ggcaaacttt tttgtctagt tat
//
LOCUS       XR_011778816            4000 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904470), transcript variant X1, ncRNA.
ACCESSION   XR_011778816
VERSION     XR_011778816.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4000
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4000
                     /gene="LOC139904470"
                     /note="uncharacterized LOC139904470; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904470"
     ncRNA           1..4000
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904470"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904470"
ORIGIN      
        1 tcccacaaac tcttaattag ggttccacaa atcaccaccc cttcgattga tactctgtat
       61 catctatgaa gatgtaatat acgttctatg aagatgtata atcgatatta aaatggctgc
      121 gttttgacca gaagctcttg cgtgaatgtg tctaaaagaa aaggttaggg tttgcagtat
      181 ttgattgttt cttatagtat ttatttgatt tcgttttata ttacagtatt tagttaaatt
      241 taatttatta ggaggttgat tagaaattca tgaattagat tcaatatggt tgtttcggat
      301 atttgattct cagttagttg gtttgttact tttttggatg tcgggtaagc tgttcagaat
      361 ttgatcgttt cttatagtat ttatattcga tttcgtttta tattatagta tttaatttaa
      421 tttgatttat taggaggttg attagggatt cacgtattag attcaatagg ttgtttcgga
      481 taaaaggtat aatattagac gaaagcaatg ttcaggtata aattattttt tcccactcaa
      541 gttctttttt atttttgtta ccatttgtaa taagttcgta tgtagttctg tatgtaccca
      601 tccagtaaaa agccaaatca ttatctgtgg tgacattcat gggtgattcc attatcttgc
      661 ttagtttttt tcctaaaaga gcacaggtaa tacttcgata ttacatctgc atctgcataa
      721 atttatataa gaatgtgttt agtagaataa gcatgtttta taagaatgtg aatttttatt
      781 gagccaaatt ggttatgaag caatattcaa aacgactaga acgtaatcaa gtacgtgttt
      841 ttggattgcc tgttcagcct tcattcgccg gtgctgtcct aaaaaaggta accacttttt
      901 cttctccgtt tgactttaat tttaccatgg tagtttcggt ttgacgagtg gagtgagtga
      961 caacttgtct atagagtttg atgggcagaa gcaatgtttg tggatgtgta atagacaagt
     1021 aatttatcaa atgttgtgta attatgattc tttttttgta tccgataatg ataatgaaag
     1081 tttatatgtt aagaaattag tgtttataaa attgacgggt ttaatagaca agttatgtat
     1141 caaatgggca tgagcatgct taaggaagag gtaaaaatgg gcgggtctaa tatggtgtta
     1201 ttttttagat atattgcttc atgtgtctgg ttgagtttgt cgatatattg tgaataaaat
     1261 tcaaggcttc gaatctgtag gaattttggg cttttaaatt caaggttgtt catggacctc
     1321 acattgtttt tttttttttt tttttttttt ttaattgtgt ggtatagccg tataggaggc
     1381 tatatggaat tcggaatcaa ataaaacagt ttttaatccc cattttatta atcatctgat
     1441 caattagcca tttcttttct ttttgttttt caatatttta atttgtcctg ctaacatgct
     1501 aaaaaattaa ccttctcact tgaggtactg cagaaagtag aaagtagcgt tgaaacagct
     1561 gacgaaaagg tagcacaatt aatagataca atgggtgaaa agtgtagatt tgtgatttct
     1621 taaagaaggc ctacaatcgt tggactacac gtgttgttct tgcagggatg ggtggttcca
     1681 gccttattgc aaaaagtgca ataaaaaggt tgttgagata tacaatcttg aaaaggagga
     1741 gtatcaaatg ccaatatgaa gttgaaactg tcccaatccc gaagatgttt gcaacagtca
     1801 caagatcaaa tccaactcac cattctcacc catgtatctt gaacttcaaa aatttcagtt
     1861 tccatggcca tatattaagg tttgttgctt acctaatgtc ttaaaccggg aagtaaatgg
     1921 tggtggcgct ttaaaacgga aagtaattgt ttgtattcgc tttacatctg aattgacctc
     1981 atttaaatta gtccgaacct gcattctgat gaaaacctgt acatgttatc ttatggtaaa
     2041 tatggtatgc atttggatac caaataagaa agaggtcttt ttgtgtttat attgcaataa
     2101 ctgggttatg ttaaataaga ttacaagaag gctatcgaaa atgactgatg aaattcgagc
     2161 tgaaattgca caatactttt ttcacactcc tcccattgtc gatgacgaca acataaagtt
     2221 gccaaaactt gatttggaca ctcctcacca tgtttacaaa ggtttaccta tatgttaaac
     2281 cagcaattta tgaatattta gttttacctt ttatgcatga aagaaatttt agtgttcata
     2341 ttattttttg aatattctgt tttgaaagtc aaagtggagt tagttggatg tcaaccacaa
     2401 catgtaaaca atgtgaagta tgttggcggg gtctttgagg taactctcga catttattga
     2461 aaatacacgt accacaattg gcttgcaaaa ttcttgaatt tttggcagga attaataata
     2521 tgacaactat aaatttgtaa gaatacatta tattagccga gtgaaagcca ttgtattcca
     2581 tcctcatcaa tctcattgag caggtgccta aaagaagcgt tttacggtga cagaatcatg
     2641 tgtgtacgtc taatccccct tatgttctaa ttaagtagca gggcatatgc attagataat
     2701 cctcagattg aagaacaaat tggtactttt tagctaattt caattttctt tttcttatgt
     2761 agtgtgcact gtacaggtcc tgtttgttgt tgcgtactat gacccttaca gttgcaaacg
     2821 ttcacccgat tgttatatat ccaacctcga tgcaggcgtc atcttacgat gtgtgagcct
     2881 gccgttgatg atttaatcgt cttcatgttg ttctccagaa gaatcatgtg caagttccaa
     2941 ggtcaagttc gcgagattat atagactaga gtcgaataag caggttatgg ttggtgatag
     3001 gctgattaga agcgaatcag aagctcttcc tactatctgt tgtaaatggg tccaaaaacc
     3061 catgggacgg gtaagagatg aagtacaaac accttaagca atactacaat ctgggttagt
     3121 gagcaacacg actttagatg ggtggaaatg ggtacttcat aacaatgaca agttcaaggc
     3181 aaattcattg gtgggactac taaaaaaaca aaattggagt ggcatcaatg gatttagaat
     3241 ccatcttgct aatacacgtc gagctattca aaaacaggtg taggctgaag ttttgcaact
     3301 ggtctgagtc agaatgaccg ctactgacat caggcgagaa gttagacaac agattccata
     3361 gtagctgaaa cagcaactgt cgtggtgaat tatatggtgt tcatgggtgt tcacgaaaaa
     3421 tatatatata gagagtagag agagacggtt gaaagggtgg tttaaaatgg tgaggttgtg
     3481 gcggtttcat caagaccgaa atagaagaaa gagagggata tagatagaga gaagatattg
     3541 gtgcaatgtg gtggttgttt cttgttcggt ggctcatggt ggtgtggcgg tttaggttga
     3601 ttaaaggtgg tggtcgatgg ctgttgttta cttgactaaa acagaaattt tgtagcagtg
     3661 agttggtgtt tataaccgta aaggaaatgg aaggaacaag ggtataattg aagtcgtcta
     3721 agaatcttga gcagggaaag gaaggacagt cgacagaagg aatcgagcag gaggaagaaa
     3781 acaagaaaaa taaaagtaga ttatgacctg taacaaattc gtacacttat ttgatattta
     3841 tttcttacag attttgtttt gtatctgtga ttgaatcttg atttgtacta gtctagagct
     3901 agaaaataaa ttacatatag taggattgta acgtgaaaca gattctgtat gatttgtgaa
     3961 atgaatttga tgtgtaacaa gatcagagag agagaaacaa
//
LOCUS       XR_011778817            3355 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904470), transcript variant X2, ncRNA.
ACCESSION   XR_011778817
VERSION     XR_011778817.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3355
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3355
                     /gene="LOC139904470"
                     /note="uncharacterized LOC139904470; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904470"
     ncRNA           1..3355
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904470"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904470"
ORIGIN      
        1 ttcccacaaa ctcttaatta gggttccaca aatcaccacc ccttcgattg atactctgta
       61 tcatctatga agatgtaata tacgttctat gaagatgtat aatcgatatt aaaatggctg
      121 cgttttgacc agaagctctt gcgtgaatgt gtctaaaaga aaaggttagg gtttgcagta
      181 tttgattgtt tcttatagta tttatttgat ttcgttttat attacagtat ttagttaaat
      241 ttaatttatt aggaggttga ttagaaattc atgaattaga ttcaatatgg ttgtttcgga
      301 tatttgattc tcagttagtt ggtttgttac ttttttggat gtcgggtaag ctgttcagaa
      361 tttgatcgtt tcttatagta tttatattcg atttcgtttt atattatagt atttaattta
      421 atttgattta ttaggaggtt gattagggat tcacgtatta gattcaatag gttgtttcgg
      481 ataaaaggta taatattaga cgaaagcaat gttcaggtat aaattatttt ttcccactca
      541 agttcttttt tatttttgtt accatttgta ataagttcgt atgtagttct gtatgtaccc
      601 atccagtaaa aagccaaatc attatctgtg gtgacattca tgggtgattc cattatcttg
      661 cttagttttt ttcctaaaag agcacaggta atacttcgat attacatctg catctgcata
      721 aatttatata agaatgtgtt tagtagaata agcatgtttt ataagaatgt gaatttttat
      781 tgagccaaat tggttatgaa gcaatattca aaacgactag aacgtaatca agtacgtgtt
      841 tttggattgc ctgttcagcc ttcattcgcc ggtgctgtcc taaaaaagaa agtagaaagt
      901 agcgttgaaa cagctgacga aaaggtagca caattaatag atacaatggg tgaaaagtgt
      961 agatttgtga tttcttaaag aaggcctaca atcgttggac tacacgtgtt gttcttgcag
     1021 ggatgggtgg ttccagcctt attgcaaaaa gtgcaataaa aaggttgttg agatatacaa
     1081 tcttgaaaag gaggagtatc aaatgccaat atgaagttga aactgtccca atcccgaaga
     1141 tgtttgcaac agtcacaaga tcaaatccaa ctcaccattc tcacccatgt atcttgaact
     1201 tcaaaaattt cagtttccat ggccatatat taaggtttgt tgcttaccta atgtcttaaa
     1261 ccgggaagta aatggtggtg gcgctttaaa acggaaagta attgtttgta ttcgctttac
     1321 atctgaattg acctcattta aattagtccg aacctgcatt ctgatgaaaa cctgtacatg
     1381 ttatcttatg gtaaatatgg tatgcatttg gataccaaat aagaaagagg tctttttgtg
     1441 tttatattgc aataactggg ttatgttaaa taagattaca agaaggctat cgaaaatgac
     1501 tgatgaaatt cgagctgaaa ttgcacaata cttttttcac actcctccca ttgtcgatga
     1561 cgacaacata aagttgccaa aacttgattt ggacactcct caccatgttt acaaaggttt
     1621 acctatatgt taaaccagca atttatgaat atttagtttt accttttatg catgaaagaa
     1681 attttagtgt tcatattatt ttttgaatat tctgttttga aagtcaaagt ggagttagtt
     1741 ggatgtcaac cacaacatgt aaacaatgtg aagtatgttg gcggggtctt tgaggtaact
     1801 ctcgacattt attgaaaata cacgtaccac aattggcttg caaaattctt gaatttttgg
     1861 caggaattaa taatatgaca actataaatt tgtaagaata cattatatta gccgagtgaa
     1921 agccattgta ttccatcctc atcaatctca ttgagcaggt gcctaaaaga agcgttttac
     1981 ggtgacagaa tcatgtgtgt acgtctaatc ccccttatgt tctaattaag tagcagggca
     2041 tatgcattag ataatcctca gattgaagaa caaattggta ctttttagct aatttcaatt
     2101 ttctttttct tatgtagtgt gcactgtaca ggtcctgttt gttgttgcgt actatgaccc
     2161 ttacagttgc aaacgttcac ccgattgtta tatatccaac ctcgatgcag gcgtcatctt
     2221 acgatgtgtg agcctgccgt tgatgattta atcgtcttca tgttgttctc cagaagaatc
     2281 atgtgcaagt tccaaggtca agttcgcgag attatataga ctagagtcga ataagcaggt
     2341 tatggttggt gataggctga ttagaagcga atcagaagct cttcctacta tctgttgtaa
     2401 atgggtccaa aaacccatgg gacgggtaag agatgaagta caaacacctt aagcaatact
     2461 acaatctggg ttagtgagca acacgacttt agatgggtgg aaatgggtac ttcataacaa
     2521 tgacaagttc aaggcaaatt cattggtggg actactaaaa aaacaaaatt ggagtggcat
     2581 caatggattt agaatccatc ttgctaatac acgtcgagct attcaaaaac aggtgtaggc
     2641 tgaagttttg caactggtct gagtcagaat gaccgctact gacatcaggc gagaagttag
     2701 acaacagatt ccatagtagc tgaaacagca actgtcgtgg tgaattatat ggtgttcatg
     2761 ggtgttcacg aaaaatatat atatagagag tagagagaga cggttgaaag ggtggtttaa
     2821 aatggtgagg ttgtggcggt ttcatcaaga ccgaaataga agaaagagag ggatatagat
     2881 agagagaaga tattggtgca atgtggtggt tgtttcttgt tcggtggctc atggtggtgt
     2941 ggcggtttag gttgattaaa ggtggtggtc gatggctgtt gtttacttga ctaaaacaga
     3001 aattttgtag cagtgagttg gtgtttataa ccgtaaagga aatggaagga acaagggtat
     3061 aattgaagtc gtctaagaat cttgagcagg gaaaggaagg acagtcgaca gaaggaatcg
     3121 agcaggagga agaaaacaag aaaaataaaa gtagattatg acctgtaaca aattcgtaca
     3181 cttatttgat atttatttct tacagatttt gttttgtatc tgtgattgaa tcttgatttg
     3241 tactagtcta gagctagaaa ataaattaca tatagtagga ttgtaacgtg aaacagattc
     3301 tgtatgattt gtgaaatgaa tttgatgtgt aacaagatca gagagagaga aacaa
//
LOCUS       XR_011778818            3309 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904470), transcript variant X3, ncRNA.
ACCESSION   XR_011778818
VERSION     XR_011778818.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3309
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3309
                     /gene="LOC139904470"
                     /note="uncharacterized LOC139904470; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904470"
     ncRNA           1..3309
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904470"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904470"
ORIGIN      
        1 tcttcccaca aactcttaat tagggttcca caaatcacca ccccttcgat tgatactctg
       61 tatcatctat gaagatgtaa tatacgttct atgaagatgt ataatcgata ttaaaatggc
      121 tgcgttttga ccagaagctc ttgcgtgaat gtgtctaaaa gaaaagcctt cattcgccgg
      181 tgctgtccta aaaaaggtaa ccactttttc ttctccgttt gactttaatt ttaccatggt
      241 agtttcggtt tgacgagtgg agtgagtgac aacttgtcta tagagtttga tgggcagaag
      301 caatgtttgt ggatgtgtaa tagacaagta atttatcaaa tgttgtgtaa ttatgattct
      361 ttttttgtat ccgataatga taatgaaagt ttatatgtta agaaattagt gtttataaaa
      421 ttgacgggtt taatagacaa gttatgtatc aaatgggcat gagcatgctt aaggaagagg
      481 taaaaatggg cgggtctaat atggtgttat tttttagata tattgcttca tgtgtctggt
      541 tgagtttgtc gatatattgt gaataaaatt caaggcttcg aatctgtagg aattttgggc
      601 ttttaaattc aaggttgttc atggacctca cattgttttt tttttttttt tttttttttt
      661 taattgtgtg gtatagccgt ataggaggct atatggaatt cggaatcaaa taaaacagtt
      721 tttaatcccc attttattaa tcatctgatc aattagccat ttcttttctt tttgtttttc
      781 aatattttaa tttgtcctgc taacatgcta aaaaattaac cttctcactt gaggtactgc
      841 agaaagtaga aagtagcgtt gaaacagctg acgaaaaggt agcacaatta atagatacaa
      901 tgggtgaaaa gtgtagattt gtgatttctt aaagaaggcc tacaatcgtt ggactacacg
      961 tgttgttctt gcagggatgg gtggttccag ccttattgca aaaagtgcaa taaaaaggtt
     1021 gttgagatat acaatcttga aaaggaggag tatcaaatgc caatatgaag ttgaaactgt
     1081 cccaatcccg aagatgtttg caacagtcac aagatcaaat ccaactcacc attctcaccc
     1141 atgtatcttg aacttcaaaa atttcagttt ccatggccat atattaaggt ttgttgctta
     1201 cctaatgtct taaaccggga agtaaatggt ggtggcgctt taaaacggaa agtaattgtt
     1261 tgtattcgct ttacatctga attgacctca tttaaattag tccgaacctg cattctgatg
     1321 aaaacctgta catgttatct tatggtaaat atggtatgca tttggatacc aaataagaaa
     1381 gaggtctttt tgtgtttata ttgcaataac tgggttatgt taaataagat tacaagaagg
     1441 ctatcgaaaa tgactgatga aattcgagct gaaattgcac aatacttttt tcacactcct
     1501 cccattgtcg atgacgacaa cataaagttg ccaaaacttg atttggacac tcctcaccat
     1561 gtttacaaag gtttacctat atgttaaacc agcaatttat gaatatttag ttttaccttt
     1621 tatgcatgaa agaaatttta gtgttcatat tattttttga atattctgtt ttgaaagtca
     1681 aagtggagtt agttggatgt caaccacaac atgtaaacaa tgtgaagtat gttggcgggg
     1741 tctttgaggt aactctcgac atttattgaa aatacacgta ccacaattgg cttgcaaaat
     1801 tcttgaattt ttggcaggaa ttaataatat gacaactata aatttgtaag aatacattat
     1861 attagccgag tgaaagccat tgtattccat cctcatcaat ctcattgagc aggtgcctaa
     1921 aagaagcgtt ttacggtgac agaatcatgt gtgtacgtct aatccccctt atgttctaat
     1981 taagtagcag ggcatatgca ttagataatc ctcagattga agaacaaatt ggtacttttt
     2041 agctaatttc aattttcttt ttcttatgta gtgtgcactg tacaggtcct gtttgttgtt
     2101 gcgtactatg acccttacag ttgcaaacgt tcacccgatt gttatatatc caacctcgat
     2161 gcaggcgtca tcttacgatg tgtgagcctg ccgttgatga tttaatcgtc ttcatgttgt
     2221 tctccagaag aatcatgtgc aagttccaag gtcaagttcg cgagattata tagactagag
     2281 tcgaataagc aggttatggt tggtgatagg ctgattagaa gcgaatcaga agctcttcct
     2341 actatctgtt gtaaatgggt ccaaaaaccc atgggacggg taagagatga agtacaaaca
     2401 ccttaagcaa tactacaatc tgggttagtg agcaacacga ctttagatgg gtggaaatgg
     2461 gtacttcata acaatgacaa gttcaaggca aattcattgg tgggactact aaaaaaacaa
     2521 aattggagtg gcatcaatgg atttagaatc catcttgcta atacacgtcg agctattcaa
     2581 aaacaggtgt aggctgaagt tttgcaactg gtctgagtca gaatgaccgc tactgacatc
     2641 aggcgagaag ttagacaaca gattccatag tagctgaaac agcaactgtc gtggtgaatt
     2701 atatggtgtt catgggtgtt cacgaaaaat atatatatag agagtagaga gagacggttg
     2761 aaagggtggt ttaaaatggt gaggttgtgg cggtttcatc aagaccgaaa tagaagaaag
     2821 agagggatat agatagagag aagatattgg tgcaatgtgg tggttgtttc ttgttcggtg
     2881 gctcatggtg gtgtggcggt ttaggttgat taaaggtggt ggtcgatggc tgttgtttac
     2941 ttgactaaaa cagaaatttt gtagcagtga gttggtgttt ataaccgtaa aggaaatgga
     3001 aggaacaagg gtataattga agtcgtctaa gaatcttgag cagggaaagg aaggacagtc
     3061 gacagaagga atcgagcagg aggaagaaaa caagaaaaat aaaagtagat tatgacctgt
     3121 aacaaattcg tacacttatt tgatatttat ttcttacaga ttttgttttg tatctgtgat
     3181 tgaatcttga tttgtactag tctagagcta gaaaataaat tacatatagt aggattgtaa
     3241 cgtgaaacag attctgtatg atttgtgaaa tgaatttgat gtgtaacaag atcagagaga
     3301 gagaaacaa
//
LOCUS       XR_011778819            2661 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904470), transcript variant X4, ncRNA.
ACCESSION   XR_011778819
VERSION     XR_011778819.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2661
                     /gene="LOC139904470"
                     /note="uncharacterized LOC139904470; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904470"
     ncRNA           1..2661
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904470"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904470"
ORIGIN      
        1 ttcccacaaa ctcttaatta gggttccaca aatcaccacc ccttcgattg atactctgta
       61 tcatctatga agatgtaata tacgttctat gaagatgtat aatcgatatt aaaatggctg
      121 cgttttgacc agaagctctt gcgtgaatgt gtctaaaaga aaagccttca ttcgccggtg
      181 ctgtcctaaa aaagaaagta gaaagtagcg ttgaaacagc tgacgaaaag gtagcacaat
      241 taatagatac aatgggtgaa aagtgtagat ttgtgatttc ttaaagaagg cctacaatcg
      301 ttggactaca cgtgttgttc ttgcagggat gggtggttcc agccttattg caaaaagtgc
      361 aataaaaagg ttgttgagat atacaatctt gaaaaggagg agtatcaaat gccaatatga
      421 agttgaaact gtcccaatcc cgaagatgtt tgcaacagtc acaagatcaa atccaactca
      481 ccattctcac ccatgtatct tgaacttcaa aaatttcagt ttccatggcc atatattaag
      541 gtttgttgct tacctaatgt cttaaaccgg gaagtaaatg gtggtggcgc tttaaaacgg
      601 aaagtaattg tttgtattcg ctttacatct gaattgacct catttaaatt agtccgaacc
      661 tgcattctga tgaaaacctg tacatgttat cttatggtaa atatggtatg catttggata
      721 ccaaataaga aagaggtctt tttgtgttta tattgcaata actgggttat gttaaataag
      781 attacaagaa ggctatcgaa aatgactgat gaaattcgag ctgaaattgc acaatacttt
      841 tttcacactc ctcccattgt cgatgacgac aacataaagt tgccaaaact tgatttggac
      901 actcctcacc atgtttacaa aggtttacct atatgttaaa ccagcaattt atgaatattt
      961 agttttacct tttatgcatg aaagaaattt tagtgttcat attatttttt gaatattctg
     1021 ttttgaaagt caaagtggag ttagttggat gtcaaccaca acatgtaaac aatgtgaagt
     1081 atgttggcgg ggtctttgag gtaactctcg acatttattg aaaatacacg taccacaatt
     1141 ggcttgcaaa attcttgaat ttttggcagg aattaataat atgacaacta taaatttgta
     1201 agaatacatt atattagccg agtgaaagcc attgtattcc atcctcatca atctcattga
     1261 gcaggtgcct aaaagaagcg ttttacggtg acagaatcat gtgtgtacgt ctaatccccc
     1321 ttatgttcta attaagtagc agggcatatg cattagataa tcctcagatt gaagaacaaa
     1381 ttggtacttt ttagctaatt tcaattttct ttttcttatg tagtgtgcac tgtacaggtc
     1441 ctgtttgttg ttgcgtacta tgacccttac agttgcaaac gttcacccga ttgttatata
     1501 tccaacctcg atgcaggcgt catcttacga tgtgtgagcc tgccgttgat gatttaatcg
     1561 tcttcatgtt gttctccaga agaatcatgt gcaagttcca aggtcaagtt cgcgagatta
     1621 tatagactag agtcgaataa gcaggttatg gttggtgata ggctgattag aagcgaatca
     1681 gaagctcttc ctactatctg ttgtaaatgg gtccaaaaac ccatgggacg ggtaagagat
     1741 gaagtacaaa caccttaagc aatactacaa tctgggttag tgagcaacac gactttagat
     1801 gggtggaaat gggtacttca taacaatgac aagttcaagg caaattcatt ggtgggacta
     1861 ctaaaaaaac aaaattggag tggcatcaat ggatttagaa tccatcttgc taatacacgt
     1921 cgagctattc aaaaacaggt gtaggctgaa gttttgcaac tggtctgagt cagaatgacc
     1981 gctactgaca tcaggcgaga agttagacaa cagattccat agtagctgaa acagcaactg
     2041 tcgtggtgaa ttatatggtg ttcatgggtg ttcacgaaaa atatatatat agagagtaga
     2101 gagagacggt tgaaagggtg gtttaaaatg gtgaggttgt ggcggtttca tcaagaccga
     2161 aatagaagaa agagagggat atagatagag agaagatatt ggtgcaatgt ggtggttgtt
     2221 tcttgttcgg tggctcatgg tggtgtggcg gtttaggttg attaaaggtg gtggtcgatg
     2281 gctgttgttt acttgactaa aacagaaatt ttgtagcagt gagttggtgt ttataaccgt
     2341 aaaggaaatg gaaggaacaa gggtataatt gaagtcgtct aagaatcttg agcagggaaa
     2401 ggaaggacag tcgacagaag gaatcgagca ggaggaagaa aacaagaaaa ataaaagtag
     2461 attatgacct gtaacaaatt cgtacactta tttgatattt atttcttaca gattttgttt
     2521 tgtatctgtg attgaatctt gatttgtact agtctagagc tagaaaataa attacatata
     2581 gtaggattgt aacgtgaaac agattctgta tgatttgtga aatgaatttg atgtgtaaca
     2641 agatcagaga gagagaaaca a
//
LOCUS       XR_011778820            3881 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904470), transcript variant X5, ncRNA.
ACCESSION   XR_011778820
VERSION     XR_011778820.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3881
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3881
                     /gene="LOC139904470"
                     /note="uncharacterized LOC139904470; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904470"
     ncRNA           1..3881
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904470"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139904470"
ORIGIN      
        1 tcccacaaac tcttaattag ggttccacaa atcaccaccc cttcgattga tactctgtat
       61 catctatgaa gatgtaatat acgttctatg aagatgtata atcgatatta aaatggctgc
      121 gttttgacca gaagctcttg cgtgaatgtg tctaaaagaa aaggttaggg tttgcagtat
      181 ttgattgttt cttatagtat ttatttgatt tcgttttata ttacagtatt tagttaaatt
      241 taatttatta ggaggttgat tagaaattca tgaattagat tcaatatggt tgtttcggat
      301 atttgattct cagttagttg gtttgttact tttttggatg tcgggtaagc tgttcagaat
      361 ttgatcgttt cttatagtat ttatattcga tttcgtttta tattatagta tttaatttaa
      421 tttgatttat taggaggttg attagggatt cacgtattag attcaatagg ttgtttcgga
      481 taaaaggtat aatattagac gaaagcaatg ttcaggtata aattattttt tcccactcaa
      541 gttctttttt atttttgtta ccatttgtaa taagttcgta tgtagttctg tatgtaccca
      601 tccagtaaaa agccaaatca ttatctgtgg tgacattcat gggtgattcc attatcttgc
      661 ttagtttttt tcctaaaaga gcacaggtaa tacttcgata ttacatctgc atctgcataa
      721 atttatataa gaatgtgttt agtagaataa gcatgtttta taagaatgtg aatttttatt
      781 gagccaaatt ggttatgaag caatattcaa aacgactaga acgtaatcaa gtacgtgttt
      841 ttggattgcc tgttcagcct tcattcgccg gtgctgtcct aaaaaaggta accacttttt
      901 cttctccgtt tgactttaat tttaccatgg tagtttcggt ttgacgagtg gagtgagtga
      961 caacttgtct atagagtttg atgggcagaa gcaatgtttg tggatgtgta atagacaagt
     1021 aatttatcaa atgttgtgta attatgattc tttttttgta tccgataatg ataatgaaag
     1081 tttatatgtt aagaaattag tgtttataaa attgacgggt ttaatagaca agttatgtat
     1141 caaatgggca tgagcatgct taaggaagag gtaaaaatgg gcgggtctaa tatggtgtta
     1201 ttttttagat atattgcttc atgtgtctgg ttgagtttgt cgatatattg tgaataaaat
     1261 tcaaggcttc gaatctgtag gaattttggg cttttaaatt caaggttgtt catggacctc
     1321 acattgtttt tttttttttt tttttttttt ttaattgtgt ggtatagccg tataggaggc
     1381 tatatggaat tcggaatcaa ataaaacagt ttttaatccc cattttatta atcatctgat
     1441 caattagcca tttcttttct ttttgttttt caatatttta atttgtcctg ctaacatgct
     1501 aaaaaattaa ccttctcact tgaggtactg cagaaagtag aaagtagcgt tgaaacagct
     1561 gacgaaaagg tagcacaatt aatagataca atgggtgaaa agtgtagatt tgtgatttct
     1621 taaagaaggc ctacaatcgt tggactacac gtgttgttct tgcagggatg ggtggttcca
     1681 gccttattgc aaaaagtgca ataaaaaggt tgttgagata tacaatcttg aaaaggagga
     1741 gtatcaaatg ccaatatgaa gttgaaactg tcccaatccc gaagatgttt gcaacagtca
     1801 caagatcaaa tccaactcac cattctcacc catgtatctt gaacttcaaa aatttcagtt
     1861 tccatggcca tatattaagg tttgttgctt acctaatgtc ttaaaccggg aagtaaatgg
     1921 tggtggcgct ttaaaacgga aagtaattgt ttgtattcgc tttacatctg aattgacctc
     1981 atttaaatta gtccgaacct gcattctgat gaaaacctgt acatgttatc ttatggtaaa
     2041 tatggtatgc atttggatac caaataagaa agaggtcttt ttgtgtttat attgcaataa
     2101 ctgggttatg ttaaataaga ttacaagaag gctatcgaaa atgactgatg aaattcgagc
     2161 tgaaattgca caatactttt ttcacactcc tcccattgtc gatgacgaca acataaagtt
     2221 gccaaaactt gatttggaca ctcctcacca tgtttacaaa ggtttaccta tatgttaaac
     2281 cagcaattta tgaatattta gttttacctt ttatgcatga aagaaatttt agtgttcata
     2341 ttattttttg aatattctgt tttgaaagtc aaagtggagt tagttggatg tcaaccacaa
     2401 catgtaaaca atgtgaagta tgttggcggg gtctttgagg taactctcga catttattga
     2461 aaatacacgt accacaattg gcttgcaaaa ttcttgaatt tttggcagga attaataata
     2521 tgacaactat aaatttgtaa gaatacatta tattagccga gtgaaagcca ttgtattcca
     2581 tcctcatcaa tctcattgag caggtgccta aaagaagcgt tttacggtga cagaatcatg
     2641 tgttgtgcac tgtacaggtc ctgtttgttg ttgcgtacta tgacccttac agttgcaaac
     2701 gttcacccga ttgttatata tccaacctcg atgcaggcgt catcttacga tgtgtgagcc
     2761 tgccgttgat gatttaatcg tcttcatgtt gttctccaga agaatcatgt gcaagttcca
     2821 aggtcaagtt cgcgagatta tatagactag agtcgaataa gcaggttatg gttggtgata
     2881 ggctgattag aagcgaatca gaagctcttc ctactatctg ttgtaaatgg gtccaaaaac
     2941 ccatgggacg ggtaagagat gaagtacaaa caccttaagc aatactacaa tctgggttag
     3001 tgagcaacac gactttagat gggtggaaat gggtacttca taacaatgac aagttcaagg
     3061 caaattcatt ggtgggacta ctaaaaaaac aaaattggag tggcatcaat ggatttagaa
     3121 tccatcttgc taatacacgt cgagctattc aaaaacaggt gtaggctgaa gttttgcaac
     3181 tggtctgagt cagaatgacc gctactgaca tcaggcgaga agttagacaa cagattccat
     3241 agtagctgaa acagcaactg tcgtggtgaa ttatatggtg ttcatgggtg ttcacgaaaa
     3301 atatatatat agagagtaga gagagacggt tgaaagggtg gtttaaaatg gtgaggttgt
     3361 ggcggtttca tcaagaccga aatagaagaa agagagggat atagatagag agaagatatt
     3421 ggtgcaatgt ggtggttgtt tcttgttcgg tggctcatgg tggtgtggcg gtttaggttg
     3481 attaaaggtg gtggtcgatg gctgttgttt acttgactaa aacagaaatt ttgtagcagt
     3541 gagttggtgt ttataaccgt aaaggaaatg gaaggaacaa gggtataatt gaagtcgtct
     3601 aagaatcttg agcagggaaa ggaaggacag tcgacagaag gaatcgagca ggaggaagaa
     3661 aacaagaaaa ataaaagtag attatgacct gtaacaaatt cgtacactta tttgatattt
     3721 atttcttaca gattttgttt tgtatctgtg attgaatctt gatttgtact agtctagagc
     3781 tagaaaataa attacatata gtaggattgt aacgtgaaac agattctgta tgatttgtga
     3841 aatgaatttg atgtgtaaca agatcagaga gagagaaaca a
//
LOCUS       XR_011778821            3988 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904470), transcript variant X6, ncRNA.
ACCESSION   XR_011778821
VERSION     XR_011778821.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3988
                     /gene="LOC139904470"
                     /note="uncharacterized LOC139904470; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904470"
     ncRNA           1..3988
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904470"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139904470"
ORIGIN      
        1 ttcccacaaa ctcttaatta gggttccaca aatcaccacc ccttcgattg atactctgta
       61 tcatctatga agatgtaata tacgttctat gaagatgtat aatcgatatt aaaatggctg
      121 cgttttgacc agaagctctt gcgtgaatgt gtctaaaaga aaaggttagg gtttgcagta
      181 tttgattgtt tcttatagta tttatttgat ttcgttttat attacagtat ttagttaaat
      241 ttaatttatt aggaggttga ttagaaattc atgaattaga ttcaatatgg ttgtttcgga
      301 tatttgattc tcagttagtt ggtttgttac ttttttggat gtcgggtaag ctgttcagaa
      361 tttgatcgtt tcttatagta tttatattcg atttcgtttt atattatagt atttaattta
      421 atttgattta ttaggaggtt gattagggat tcacgtatta gattcaatag gttgtttcgg
      481 ataaaaggta taatattaga cgaaagcaat gttcaggtat aaattatttt ttcccactca
      541 agttcttttt tatttttgtt accatttgta ataagttcgt atgtagttct gtatgtaccc
      601 atccagtaaa aagccaaatc attatctgtg gtgacattca tgggtgattc cattatcttg
      661 cttagttttt ttcctaaaag agcacaggta atacttcgat attacatctg catctgcata
      721 aatttatata agaatgtgtt tagtagaata agcatgtttt ataagaatgt gaatttttat
      781 tgagccaaat tggttatgaa gcaatattca aaacgactag aacgtaatca agtacgtgtt
      841 tttggattgc ctgttcagcc ttcattcgcc ggtgctgtcc taaaaaaggt aaccactttt
      901 tcttctccgt ttgactttaa ttttaccatg gtagtttcgg tttgacgagt ggagtgagtg
      961 acaacttgtc tatagagttt gatgggcaga agcaatgttt gtggatgtgt aatagacaag
     1021 taatttatca aatgttgtgt aattatgatt ctttttttgt atccgataat gataatgaaa
     1081 gtttatatgt taagaaatta gtgtttataa aattgacggg tttaatagac aagttatgta
     1141 tcaaatgggc atgagcatgc ttaaggaaga ggtaaaaatg ggcgggtcta atatggtgtt
     1201 attttttaga tatattgctt catgtgtctg gttgagtttg tcgatatatt gtgaataaaa
     1261 ttcaaggctt cgaatctgta ggaattttgg gcttttaaat tcaaggttgt tcatggacct
     1321 cacattgttt tttttttttt tttttttttt tttaattgtg tggtatagcc gtataggagg
     1381 ctatatggaa ttcggaatca aataaaacag tttttaatcc ccattttatt aatcatctga
     1441 tcaattagcc atttcttttc tttttgtttt tcaatatttt aatttgtcct gctaacatgc
     1501 taaaaaatta accttctcac ttgaggtact gcagaaagta gaaagtagcg ttgaaacagc
     1561 tgacgaaaag gtagcacaat taatagatac aatgggtgaa aagtgtagat ttgtgatttc
     1621 ttaaagaagg cctacaatcg ttggactaca cgtgttgttc ttgcagggat gggtggttcc
     1681 agccttattg caaaaagtgc aataaaaagg ttgttgagat atacaatctt gaaaaggagg
     1741 agtatcaaat gccaatatga agttgaaact gtcccaatcc cgaagatgtt tgcaacagtc
     1801 acaagatcaa atccaactca ccattctcac ccatgtatct tgaacttcaa aaatttcagt
     1861 ttccatggcc atatattaag gtttgttgct tacctaatgt cttaaaccgg gaagtaaatg
     1921 gtggtggcgc tttaaaacgg aaagtaattg tttgtattcg ctttacatct gaattgacct
     1981 catttaaatt agtccgaacc tgcattctga tgaaaacctg tacatgttat cttatggtaa
     2041 atatggtatg catttggata ccaaataaga aagaggtctt tttgtgttta tattgcaata
     2101 actgggttat gttaaataag attacaagaa ggctatcgaa aatgactgat gaaattcgag
     2161 ctgaaattgc acaatacttt tttcacactc ctcccattgt cgatgacgac aacataaagt
     2221 tgccaaaact tgatttggac actcctcacc atgtttacaa aggtttacct atatgttaaa
     2281 ccagcaattt atgaatattt agttttacct tttatgcatg aaagaaattt tagtgttcat
     2341 attatttttt gaatattctg ttttgaaagt caaagtggag ttagttggat gtcaaccaca
     2401 acatgtaaac aatgtgaagt atgttggcgg ggtctttgag gtaactctcg acatttattg
     2461 aaaatacacg taccacaatt ggcttgcaaa attcttgaat ttttggcagg aattaataat
     2521 atgacaacta taaatttgta agaatacatt atattagccg agtgaaagcc attgtattcc
     2581 atcctcatca atctcattga gcaggtgcct aaaagaagcg ttttacggtg acagaatcat
     2641 gtgtgtacgt ctaatccccc ttatgttcta attaagtagc agggcatatg cattagataa
     2701 tcctcagatt gaagaacaaa ttggtacttt ttagctaatt tcaattttct ttttcttatg
     2761 tagtgtgcac tgtacaggtc ctgtttgttg ttgcgtacta tgacccttac agttgcaaac
     2821 gttcacccga ttgttatata tccaacctcg atgcaggcgt catcttacga tgtgtgagcc
     2881 tgccgttgat gatttaatcg tcttcatgtt gttctccaga agttccaagg tcaagttcgc
     2941 gagattatat agactagagt cgaataagca ggttatggtt ggtgataggc tgattagaag
     3001 cgaatcagaa gctcttccta ctatctgttg taaatgggtc caaaaaccca tgggacgggt
     3061 aagagatgaa gtacaaacac cttaagcaat actacaatct gggttagtga gcaacacgac
     3121 tttagatggg tggaaatggg tacttcataa caatgacaag ttcaaggcaa attcattggt
     3181 gggactacta aaaaaacaaa attggagtgg catcaatgga tttagaatcc atcttgctaa
     3241 tacacgtcga gctattcaaa aacaggtgta ggctgaagtt ttgcaactgg tctgagtcag
     3301 aatgaccgct actgacatca ggcgagaagt tagacaacag attccatagt agctgaaaca
     3361 gcaactgtcg tggtgaatta tatggtgttc atgggtgttc acgaaaaata tatatataga
     3421 gagtagagag agacggttga aagggtggtt taaaatggtg aggttgtggc ggtttcatca
     3481 agaccgaaat agaagaaaga gagggatata gatagagaga agatattggt gcaatgtggt
     3541 ggttgtttct tgttcggtgg ctcatggtgg tgtggcggtt taggttgatt aaaggtggtg
     3601 gtcgatggct gttgtttact tgactaaaac agaaattttg tagcagtgag ttggtgttta
     3661 taaccgtaaa ggaaatggaa ggaacaaggg tataattgaa gtcgtctaag aatcttgagc
     3721 agggaaagga aggacagtcg acagaaggaa tcgagcagga ggaagaaaac aagaaaaata
     3781 aaagtagatt atgacctgta acaaattcgt acacttattt gatatttatt tcttacagat
     3841 tttgttttgt atctgtgatt gaatcttgat ttgtactagt ctagagctag aaaataaatt
     3901 acatatagta ggattgtaac gtgaaacaga ttctgtatga tttgtgaaat gaatttgatg
     3961 tgtaacaaga tcagagagag agaaacaa
//
LOCUS       XR_011778822            3877 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904470), transcript variant X7, ncRNA.
ACCESSION   XR_011778822
VERSION     XR_011778822.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3877
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3877
                     /gene="LOC139904470"
                     /note="uncharacterized LOC139904470; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904470"
     ncRNA           1..3877
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904470"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139904470"
ORIGIN      
        1 tcccacaaac tcttaattag ggttccacaa atcaccaccc cttcgattga tactctgtat
       61 catctatgaa gatgtaatat acgttctatg aagatgtata atcgatatta aaatggctgc
      121 gttttgacca gaagctcttg cgtgaatgtg tctaaaagaa aaggttaggg tttgcagtat
      181 ttgattgttt cttatagtat ttatttgatt tcgttttata ttacagtatt tagttaaatt
      241 taatttatta ggaggttgat tagaaattca tgaattagat tcaatatggt tgtttcggat
      301 atttgattct cagttagttg gtttgttact tttttggatg tcgggtaagc tgttcagaat
      361 ttgatcgttt cttatagtat ttatattcga tttcgtttta tattatagta tttaatttaa
      421 tttgatttat taggaggttg attagggatt cacgtattag attcaatagg ttgtttcgga
      481 taaaaggtat aatattagac gaaagcaatg ttcaggtata aattattttt tcccactcaa
      541 gttctttttt atttttgtta ccatttgtaa taagttcgta tgtagttctg tatgtaccca
      601 tccagtaaaa agccaaatca ttatctgtgg tgacattcat gggtgattcc attatcttgc
      661 ttagtttttt tcctaaaaga gcacaggtaa tacttcgata ttacatctgc atctgcataa
      721 atttatataa gaatgtgttt agtagaataa gcatgtttta taagaatgtg aatttttatt
      781 gagccaaatt ggttatgaag caatattcaa aacgactaga acgtaatcaa gtacgtgttt
      841 ttggattgcc tgttcagcct tcattcgccg gtgctgtcct aaaaaaggta accacttttt
      901 cttctccgtt tgactttaat tttaccatgg tagtttcggt ttgacgagtg gagtgagtga
      961 caacttgtct atagagtttg atgggcagaa gcaatgtttg tggatgtgta atagacaagt
     1021 aatttatcaa atgttgtgta attatgattc tttttttgta tccgataatg ataatgaaag
     1081 tttatatgtt aagaaattag tgtttataaa attgacgggt ttaatagaca agttatgtat
     1141 caaatgggca tgagcatgct taaggaagag gtaaaaatgg gcgggtctaa tatggtgtta
     1201 ttttttagat atattgcttc atgtgtctgg ttgagtttgt cgatatattg tgaataaaat
     1261 tcaaggcttc gaatctgtag gaattttggg cttttaaatt caaggttgtt catggacctc
     1321 acattgtttt tttttttttt tttttttttt ttaattgtgt ggtatagccg tataggaggc
     1381 tatatggaat tcggaatcaa ataaaacagt ttttaatccc cattttatta atcatctgat
     1441 caattagcca tttcttttct ttttgttttt caatatttta atttgtcctg ctaacatgct
     1501 aaaaaattaa ccttctcact tgaggtactg cagaaagtag aaagtagcgt tgaaacagct
     1561 gacgaaaagg tagcacaatt aatagataca atgggtgaaa agtgtagatt tgtgatttct
     1621 taaagaaggc ctacaatcgt tggactacac gtgttgttct tgcagggatg ggtggttcca
     1681 gccttattgc aaaaagtgca ataaaaaggt tgttgagata tacaatcttg aaaaggagga
     1741 gtatcaaatg ccaatatgaa gttgaaactg tcccaatccc gaagatgttt gcaacagtca
     1801 caagatcaaa tccaactcac cattctcacc catgtatctt gaacttcaaa aatttcagtt
     1861 tccatggcca tatattaagg tttgttgctt acctaatgtc ttaaaccggg aagtaaatgg
     1921 tggtggcgct ttaaaacgga aagtaattgt ttgtattcgc tttacatctg aattgacctc
     1981 atttaaatta gtccgaacct gcattctgat gaaaacctgt acatgttatc ttatggtaaa
     2041 tatggtatgc atttggatac caaataagaa agaggtcttt ttgtgtttat attgcaataa
     2101 ctgggttatg ttaaataaga ttacaagaag gctatcgaaa atgactgatg aaattcgagc
     2161 tgaaattgca caatactttt ttcacactcc tcccattgtc gatgacgaca acataaagtt
     2221 gccaaaactt gatttggaca ctcctcacca tgtttacaaa ggtttaccta tatgttaaac
     2281 cagcaattta tgaatattta gttttacctt ttatgcatga aagaaatttt agtgttcata
     2341 ttattttttg aatattctgt tttgaaagtc aaagtggagt tagttggatg tcaaccacaa
     2401 catgtaaaca atgtgaagta tgttggcggg gtctttgagg taactctcga catttattga
     2461 aaatacacgt accacaattg gcttgcaaaa ttcttgaatt tttggcagga attaataata
     2521 tgacaactat aaatttgtaa gaatacatta tattagccga gtgaaagcca ttgtattcca
     2581 tcctcatcaa tctcattgag caggtgccta aaagaagcgt tttacggtga cagaatcatt
     2641 gtgcactgta caggtcctgt ttgttgttgc gtactatgac ccttacagtt gcaaacgttc
     2701 acccgattgt tatatatcca acctcgatgc aggcgtcatc ttacgatgtg tgagcctgcc
     2761 gttgatgatt taatcgtctt catgttgttc tccagaagaa tcatgtgcaa gttccaaggt
     2821 caagttcgcg agattatata gactagagtc gaataagcag gttatggttg gtgataggct
     2881 gattagaagc gaatcagaag ctcttcctac tatctgttgt aaatgggtcc aaaaacccat
     2941 gggacgggta agagatgaag tacaaacacc ttaagcaata ctacaatctg ggttagtgag
     3001 caacacgact ttagatgggt ggaaatgggt acttcataac aatgacaagt tcaaggcaaa
     3061 ttcattggtg ggactactaa aaaaacaaaa ttggagtggc atcaatggat ttagaatcca
     3121 tcttgctaat acacgtcgag ctattcaaaa acaggtgtag gctgaagttt tgcaactggt
     3181 ctgagtcaga atgaccgcta ctgacatcag gcgagaagtt agacaacaga ttccatagta
     3241 gctgaaacag caactgtcgt ggtgaattat atggtgttca tgggtgttca cgaaaaatat
     3301 atatatagag agtagagaga gacggttgaa agggtggttt aaaatggtga ggttgtggcg
     3361 gtttcatcaa gaccgaaata gaagaaagag agggatatag atagagagaa gatattggtg
     3421 caatgtggtg gttgtttctt gttcggtggc tcatggtggt gtggcggttt aggttgatta
     3481 aaggtggtgg tcgatggctg ttgtttactt gactaaaaca gaaattttgt agcagtgagt
     3541 tggtgtttat aaccgtaaag gaaatggaag gaacaagggt ataattgaag tcgtctaaga
     3601 atcttgagca gggaaaggaa ggacagtcga cagaaggaat cgagcaggag gaagaaaaca
     3661 agaaaaataa aagtagatta tgacctgtaa caaattcgta cacttatttg atatttattt
     3721 cttacagatt ttgttttgta tctgtgattg aatcttgatt tgtactagtc tagagctaga
     3781 aaataaatta catatagtag gattgtaacg tgaaacagat tctgtatgat ttgtgaaatg
     3841 aatttgatgt gtaacaagat cagagagaga gaaacaa
//
LOCUS       XR_011778823            3932 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904470), transcript variant X8, ncRNA.
ACCESSION   XR_011778823
VERSION     XR_011778823.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3932
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3932
                     /gene="LOC139904470"
                     /note="uncharacterized LOC139904470; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904470"
     ncRNA           1..3932
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904470"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139904470"
ORIGIN      
        1 ttcccacaaa ctcttaatta gggttccaca aatcaccacc ccttcgattg atactctgta
       61 tcatctatga agatgtaata tacgttctat gaagatgtat aatcgatatt aaaatggctg
      121 cgttttgacc agaagctctt gcgtgaatgt gtctaaaaga aaaggttagg gtttgcagta
      181 tttgattgtt tcttatagta tttatttgat ttcgttttat attacagtat ttagttaaat
      241 ttaatttatt aggaggttga ttagaaattc atgaattaga ttcaatatgg ttgtttcgga
      301 tatttgattc tcagttagtt ggtttgttac ttttttggat gtcgggtaag ctgttcagaa
      361 tttgatcgtt tcttatagta tttatattcg atttcgtttt atattatagt atttaattta
      421 atttgattta ttaggaggtt gattagggat tcacgtatta gattcaatag gttgtttcgg
      481 ataaaaggta taatattaga cgaaagcaat gttcaggtat aaattatttt ttcccactca
      541 agttcttttt tatttttgtt accatttgta ataagttcgt atgtagttct gtatgtaccc
      601 atccagtaaa aagccaaatc attatctgtg gtgacattca tgggtgattc cattatcttg
      661 cttagttttt ttcctaaaag agcacaggta atacttcgat attacatctg catctgcata
      721 aatttatata agaatgtgtt tagtagaata agcatgtttt ataagaatgt gaatttttat
      781 tgagccaaat tggttatgaa gcaatattca aaacgactag aacgtaatca agtacgtgtt
      841 tttggattgc ctgttcagcc ttcattcgcc ggtgctgtcc taaaaaaggt aaccactttt
      901 tcttctccgt ttgactttaa ttttaccatg gtagtttcgg tttgacgagt ggagtgagtg
      961 acaacttgtc tatagagttt gatgggcaga agcaatgttt gtggatgtgt aatagacaag
     1021 taatttatca aatgttgtgt aattatgatt ctttttttgt atccgataat gataatgaaa
     1081 gtttatatgt taagaaatta gtgtttataa aattgacggg tttaatagac aagttatgta
     1141 tcaaatgggc atgagcatgc ttaaggaaga ggtaaaaatg ggcgggtcta atatggtgtt
     1201 attttttaga tatattgctt catgtgtctg gttgagtttg tcgatatatt gtgaataaaa
     1261 ttcaaggctt cgaatctgta ggaattttgg gcttttaaat tcaaggttgt tcatggacct
     1321 cacattgttt tttttttttt tttttttttt tttaattgtg tggtatagcc gtataggagg
     1381 ctatatggaa ttcggaatca aataaaacag tttttaatcc ccattttatt aatcatctga
     1441 tcaattagcc atttcttttc tttttgtttt tcaatatttt aatttgtcct gctaacatgc
     1501 taaaaaatta accttctcac ttgaggtact gcagaaagta gaaagtagcg ttgaaacagc
     1561 tgacgaaaag gtagcacaat taatagatac aatgggtgaa aagtgtagat ttgtgatttc
     1621 ttaaagaagg cctacaatcg ttggactaca cgtgttgttc ttgcagggat gggtggttcc
     1681 agccttattg caaaaagtgc aataaaaagg ttgttgagat atacaatctt gaaaaggagg
     1741 agtatcaaat gccaatatga agttgaaact gtcccaatcc cgaagatgtt tgcaacagtc
     1801 acaagatcaa atccaactca ccattctcac ccatgtatct tgaacttcaa aaatttcagt
     1861 ttccatggcc atatattaag gtttgttgct tacctaatgt cttaaaccgg gaagtaaatg
     1921 gtggtggcgc tttaaaacgg aaagtaattg tttgtattcg ctttacatct gaattgacct
     1981 catttaaatt agtccgaacc tgcattctga tgaaaacctg tacatgttat cttatggtaa
     2041 atatggtatg catttggata ccaaataaga aagaggtctt tttgtgttta tattgcaata
     2101 actgggttat gttaaataag attacaagaa ggctatcgaa aatgactgat gaaattcgag
     2161 ctgaaattgc acaatacttt tttcacactc ctcccattgt cgatgacgac aacataaagt
     2221 tgccaaaact tgatttggac actcctcacc atgtttacaa aggtttacct atatgttaaa
     2281 ccagcaattt atgaatattt agttttacct tttatgcatg aaagaaattt tagtgttcat
     2341 attatttttt gaatattctg ttttgaaagt caaagtggag ttagttggat gtcaaccaca
     2401 acatgtaaac aatgtgaagt atgttggcgg ggtctttgag gaattaataa tatgacaact
     2461 ataaatttgt aagaatacat tatattagcc gagtgaaagc cattgtattc catcctcatc
     2521 aatctcattg agcaggtgcc taaaagaagc gttttacggt gacagaatca tgtgtgtacg
     2581 tctaatcccc cttatgttct aattaagtag cagggcatat gcattagata atcctcagat
     2641 tgaagaacaa attggtactt tttagctaat ttcaattttc tttttcttat gtagtgtgca
     2701 ctgtacaggt cctgtttgtt gttgcgtact atgaccctta cagttgcaaa cgttcacccg
     2761 attgttatat atccaacctc gatgcaggcg tcatcttacg atgtgtgagc ctgccgttga
     2821 tgatttaatc gtcttcatgt tgttctccag aagaatcatg tgcaagttcc aaggtcaagt
     2881 tcgcgagatt atatagacta gagtcgaata agcaggttat ggttggtgat aggctgatta
     2941 gaagcgaatc agaagctctt cctactatct gttgtaaatg ggtccaaaaa cccatgggac
     3001 gggtaagaga tgaagtacaa acaccttaag caatactaca atctgggtta gtgagcaaca
     3061 cgactttaga tgggtggaaa tgggtacttc ataacaatga caagttcaag gcaaattcat
     3121 tggtgggact actaaaaaaa caaaattgga gtggcatcaa tggatttaga atccatcttg
     3181 ctaatacacg tcgagctatt caaaaacagg tgtaggctga agttttgcaa ctggtctgag
     3241 tcagaatgac cgctactgac atcaggcgag aagttagaca acagattcca tagtagctga
     3301 aacagcaact gtcgtggtga attatatggt gttcatgggt gttcacgaaa aatatatata
     3361 tagagagtag agagagacgg ttgaaagggt ggtttaaaat ggtgaggttg tggcggtttc
     3421 atcaagaccg aaatagaaga aagagaggga tatagataga gagaagatat tggtgcaatg
     3481 tggtggttgt ttcttgttcg gtggctcatg gtggtgtggc ggtttaggtt gattaaaggt
     3541 ggtggtcgat ggctgttgtt tacttgacta aaacagaaat tttgtagcag tgagttggtg
     3601 tttataaccg taaaggaaat ggaaggaaca agggtataat tgaagtcgtc taagaatctt
     3661 gagcagggaa aggaaggaca gtcgacagaa ggaatcgagc aggaggaaga aaacaagaaa
     3721 aataaaagta gattatgacc tgtaacaaat tcgtacactt atttgatatt tatttcttac
     3781 agattttgtt ttgtatctgt gattgaatct tgatttgtac tagtctagag ctagaaaata
     3841 aattacatat agtaggattg taacgtgaaa cagattctgt atgatttgtg aaatgaattt
     3901 gatgtgtaac aagatcagag agagagaaac aa
//
LOCUS       XR_011778824            5471 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X1, ncRNA.
ACCESSION   XR_011778824
VERSION     XR_011778824.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5471
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..5471
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg ttagtatttc taattttttt atacgatttt
      421 caggttgtac gattcaggtt gaataccaaa ttacaatttc aatagcctat atacaattgg
      481 cttaatatca aatcaacata gctggagatc tccaaattgt atcagtcttt gcatctcttt
      541 ccttgatttc ttatatcaat taaaaatcat aatgtcactc gatttggtga ttttgattac
      601 acctgtatac tatccgaaaa ttagggttcg cgaaaattgt ttttgttctc ctatacgaga
      661 atcatctgtt ctttatcaaa ttaacatcaa gagttcacga aaaagcagga attttgacta
      721 aatgtgagtg ttgcttatgg gtttgattta tttttggtta ttgatttaac gggtgttcat
      781 agattgagaa tttctcctct ctatctccgt tactgtttat ttcttactgt gtgtatttta
      841 ggttattaat agaaagaaga agtgtatgtg tgtgtatatc taatgattga tttttggcaa
      901 ttccagaaag gaattaattt tatgtattta gtcgtattaa tttgtataac cattagtggt
      961 ttatatagtt gtaggaaatt ttggttgtat gtgttcttat gttgtcttgg attctttttg
     1021 ctgctgtgat tgatgtatta tgcttctagg tattacgctt cggaatagtg accggatttt
     1081 aaagcctatc tctggaaaat atcccaaaca actacttcga gttcaactta tgtgactata
     1141 taagcaacct ggttaacaca cacgcgtttc gcggcatgta cataaaccct cttgttctta
     1201 ccaaaaacat tacataatag atggatacta acattactac aaacagatta tataggttgt
     1261 gtactaaacg ttggacccat cagcgataaa tgtttgagat aggataaatt gaaacagaat
     1321 aaggtatggt ggttaatttg gtttagatat gtacgcatgt ttatcttttt gacttttttt
     1381 aaacaaatta gtcctgtaat tctgttatac aattcacagg aaactcatat tgtcatttta
     1441 ttggtttttt gtggaatcct ctgtcacgtg taatgaaagc taaaacgatc attgttatgg
     1501 ctatcgctat cgtacgaaga agggtcagtc actttcagta tctcatttca agaattcata
     1561 ggttaatgat taatgaacat ggagcaagtg ttatatgttt ttgacggctt acatttgaat
     1621 atcccacatg tcctaaacaa cgttattctg tgcatatcta aacaaactgg gtctaggaga
     1681 tttatcaata atcacatcag atcttacttt ttatgatgaa agatatgcag caactcatct
     1741 tggacatcaa attggggttt ttgctttttt ccaccttatt atcgattata cataggtcat
     1801 ttttcaaaca gattgtactt atgtacttat gagctttact cacaataaca acaacaacaa
     1861 caacaatacc caatcccacg aatgtagggt acgggggagg tggagtgtag acaatcattc
     1921 cccgtactct agactagaag gaaatcccta ctccacttgc gggtatagaa tccgcgacta
     1981 gataagatcg tccctccctc tactcgagag ccaagagatt gcttcctaaa ggacctccgg
     2041 ccttactcat gcttatatta tcagtaatat ctacaaattt gttccctttt cttttattcg
     2101 atttgtaaga taccatttag tactataata caaagtgtta ttagggatta attggtgctg
     2161 ttgatacatc ggtgatgtta ggtttgcagc ccaatatcaa aaagatagaa taaattgatc
     2221 taattacact tcttatgatt acatccatca aggtactttg attattaatt atacccatct
     2281 tatttaacat ctctttcgtt ttatgttttt catgtcaact tatcgttagt atttatgatt
     2341 attatatata gttagttttg gtgactgata aaaggcgtat tcaggtaata aaaaatatat
     2401 ttcttctttg tattcttctg ggttgatgta ttgtagccat gttaatttta aagttaattt
     2461 tggtggctgc caaaagcttt ttagcgtttg gaccatgtta tttttacagt ttatcataca
     2521 ttatccatat tgctacaggt aaacactatg tataagtttg gttgattatt gtgggtcgtt
     2581 tttacaatga tgtcaatata gtcataccct tacatcatct aatatgtaga aaataattac
     2641 ttcccttata tcttacttta taagagtaac atacatagta acaaccaatt aatcatacaa
     2701 ctgtacaccc agtttacatg cgatggagtt gtttcctacg tggaaacggg aagagattgt
     2761 tatcatcaaa aacatgtaac tgagtgccgt aacaaagtca tgaaagttga caatcaactg
     2821 caatgtatag acaaaggtga aaaaacaact gcacaaccac gtaataataa atttataaaa
     2881 caaacagcct attaatgtag taaacatcaa ttttatgtac attagaccac cccctatggt
     2941 tagttacccg tccgttaccc gctcattacc cgtaatgaac cataggcacg agctagttac
     3001 ccgctttagt tacccgcttt agttacccgc ttccaccatg gatttaacgg aagtatgaag
     3061 gttggttata gtaattgtgg gtcccaatgg ctttttattg tttggacttg atgctttatt
     3121 gcttgtacat tgtatattaa gaggagtatt ttttttagcc attagactac tccctatagt
     3181 tagttatccg ctagttaccc gctagttacc cgtcattacc cgtaactaac cataggcacc
     3241 atttagttat ccgcgttagt tacccgcatt ctccatggat ttggcgagag tgttatatgc
     3301 atgtgggacc ctcaatgctt taaattgttt atactttgtg ctatattttt tgtacattgt
     3361 tagtttttgg caattattat agggagtgtt tagttatagg attttatgag ttagttatag
     3421 gatataagtg ttgatgtggc actgatgtga cagttaagag gatgaatagt gttagtcacg
     3481 atagggagtg gccttatagg gaatgtttag ttatggatta gttatagaat attggtgttg
     3541 atgtggcgct gatgtggaag gttaagagga tgaatagttt agttacgata gggagtggcc
     3601 ttatggttta gataattggt tatgattttt cattttccat cacctgactg cttgtggaga
     3661 aaagatcaga agcctgtttt tcagtgttac atgtcagcat cattggtttg tatatatata
     3721 tcttatagta tcgtttttca catcagcttc cagttgcaac aactcgagag gaaatcaaga
     3781 gagcctatta taattgcatg aaatcctgac accaagtgga aatgatctcg atgctaccaa
     3841 gttctgcatg tttatatcat taacaacgtt tatgaggtgg gattatataa taaaaggggt
     3901 tgatctaagc cccttctttt atgagtcatt ttacattttt agtcttatga aagcaacttc
     3961 tttgtgagta tgaatttgat taacctcatt aatctaaatt aatttatttt caacataata
     4021 ttgttcttgt gtaatattta taggtttggt atgaagatga tcgaagaagg tttcactggg
     4081 attttaacgt tttatacttc attgatgttt ctataagggt aagctgatct taattttacg
     4141 taatggttac aggtaacata tttagctggt tgtgtttggg tcaaaattat aggtcgctca
     4201 ggttgggctc acatgacaat acttcttttt tcttcttgtt ttacttgagt aaacaattaa
     4261 gtaatgcagt atcaaatatg gtcacactaa ctatgtgctt acaaattatg aagaacccat
     4321 ataatccgtc gagcaataaa caaaatccag attttggatc gttgaattaa gcccgaaatt
     4381 gaaattaaaa tttatgctct tttgggtaca ttatgtgatt tgggtaactg gagaattatt
     4441 atatataaaa atattttagt cgattcgatt taagatgaca aaggataaag tttttgtaca
     4501 tatcaggtac gaattcatct tttagtgttg atttttaatt caaaattttg tgcatgcgtt
     4561 ttacttggat ggtgaggtga tgatgaacac gggaagactt gcattaaggg aatgtagtag
     4621 aagagttccc tttattatga tgggtagaat gccgtcaatt aaccccgtta taccttatgc
     4681 tgccacgtgt ctcattactc acatttttta gcaataacaa gatattttgc caatctgtat
     4741 accctttgcg tattaggtta gagcttctgg tatgtgtctt ggttttggtt ttgctgtttg
     4801 gcttcaactg gaggtgctgg caatttaaaa tggactgtgg atgatgtaat ttggtgattt
     4861 tgaagcccga aaatgatcta ctgataatca ggatgttaag ttgactttaa taggtcaatt
     4921 taaatgtaag ctggaaagtc tgattgatat caagcaggat tatgggtgtg taagatgggt
     4981 caagattatc attgtacaaa tggaatgggt cgagattgtt gctgaactac aaagattggt
     5041 taaatctgca aatttgaaca tgtagatcaa ctttgtcaaa atattgttac aatgggaacc
     5101 gtgggtcaaa tgttttacat tggaatcatt ttactggatt tatgtcatgc tagaaaatca
     5161 agtttgagga tgatcagcta ttgagaaatg tttgttgttg ttgcgcaaga gagagtattt
     5221 gtgatgatgt tactgttatg ttgacttata attgtcaatt tggaaagtct acatgtaagg
     5281 gttccgcttt ggatcatgat gggaattaca tcagtttcaa tggaattgac aaaaaaaagc
     5341 tggataataa atataatgag ctgaatttga cggagttatg gtaatcatag tgactcaagt
     5401 aaagttatga gaatgaagac tttgatgata cgatattttt gttattattt gattgttctt
     5461 agtaatgaag t
//
LOCUS       XR_011778825            5304 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X2, ncRNA.
ACCESSION   XR_011778825
VERSION     XR_011778825.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5304
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..5304
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg ttagtatttc taattttttt atacgatttt
      421 caggttgtac gattcaggtt gaataccaaa ttacaatttc aatagcctat atacaattgg
      481 cttaatatca aatcaacata gctggagatc tccaaattgt atcagtcttt gcatctcttt
      541 ccttgatttc ttatatcaat taaaaatcat aatgtcactc gatttggtga ttttgattac
      601 acctgtatac tatccgaaaa ttagggttcg cgaaaattgt ttttgttctc ctatacgaga
      661 atcatctgtt ctttatcaaa ttaacatcaa gagttcacga aaaagcagga attttgacta
      721 aatgtgagtg ttgcttatgg gtttgattta tttttggtta ttgatttaac gggtgttcat
      781 agattgagaa tttctcctct ctatctccgt tactgtttat ttcttactgt gtgtatttta
      841 ggttattaat agaaagaaga agtgtatgtg tgtgtatatc taatgattga tttttggcaa
      901 ttccagaaag gaattaattt tatgtattta gtcgtattaa tttgtataac cattagtggt
      961 ttatatagtt gtaggaaatt ttggttgtat gtgttcttat gttgtcttgg attctttttg
     1021 ctgctgtgat tgatgtatta tgcttctagg tattacgctt cggaatagtg accggatttt
     1081 aaagcctatc tctggaaaat atcccaaaca actacttcga gttcaactta tgtgactata
     1141 taagcaacct ggttaacaca cacgcgtttc gcggcatgta cataaaccct cttgttctta
     1201 ccaaaaacat tacataatag atggatacta acattactac aaacagatta tataggttgt
     1261 gtactaaacg ttggacccat cagcgataaa tgtttgagat aggataaatt gaaacagaat
     1321 aaggtatggt ggttaatttg gtttagatat gtacgcatgt ttatcttttt gacttttttt
     1381 aaacaaatta gtcctgtaat tctgttatac aattcacagg aaactcatat tgtcatttta
     1441 ttggtttttt gtggaatcct ctgtcacgtg taatgaaagc taaaacgatc attgttatgg
     1501 ctatcgctat cgtacgaaga agggtcagtc actttcagta tctcatttca agaattcata
     1561 ggttaatgat taatgaacat ggagcaagtg ttatatgttt ttgacggctt acatttgaat
     1621 atcccacatg tcctaaacaa cgttattctg tgcatatcta aacaaactgg gtctaggaga
     1681 tttatcaata atcacatcag atcttacttt ttatgatgaa agatatgcag caactcatct
     1741 tggacatcaa attggggttt ttgctttttt ccaccttatt atcgattata cataggtcat
     1801 ttttcaaaca gattgtactt atgtacttat gagctttact cacaataaca acaacaacaa
     1861 caacaatacc caatcccacg aatgtagggt acgggggagg tggagtgtag acaatcattc
     1921 cccgtactct agactagaag gaaatcccta ctccacttgc gggtatagaa tccgcgacta
     1981 gataagatcg tccctccctc tactcgagag ccaagagatt gcttcctaaa ggacctccgg
     2041 ccttactcat gcttatatta tcagtaatat ctacaaattt gttccctttt cttttattcg
     2101 atttgtaaga taccatttag tactataata caaagtgtta ttagggatta attggtgctg
     2161 ttgatacatc ggtgatgtta ggtttgcagc ccaatatcaa aaagatagaa taaattgatc
     2221 taattacact tcttatgatt acatccatca aggtactttg attattaatt atacccatct
     2281 tatttaacat ctctttcgtt ttatgttttt catgtcaact tatcgttagt atttatgatt
     2341 attatatata gttagttttg gtgactgata aaaggcgtat tcaggtaata aaaaatatat
     2401 ttcttctttg tattcttctg ggttgatgta ttgtagccat gttaatttta aagttaattt
     2461 tggtggctgc caaaagcttt ttagcgtttg gaccatgtta tttttacagt ttatcataca
     2521 ttatccatat tgctacaggt aaacactatg tataagtttg gttgattatt gtgggtcgtt
     2581 tttacaatga tgtcaatata gtcataccct tacatcatct aatatgtaga aaataattac
     2641 ttcccttata tcttacttta taagagtaac atacatagta acaaccaatt aatcatacaa
     2701 ctgtacaccc agtttacatg cgatggagtt gtttcctacg tggaaacggg aagagattgt
     2761 tatcatcaaa aacatgtaac tgagtgccgt aacaaagtca tgaaagttga caatcaactg
     2821 caatgtatag acaaaggtga aaaaacaact gcacaaccac gtaataataa atttataaaa
     2881 caaacagcct attaatgtag taaacatcaa ttttatgtac attagaccac cccctatggt
     2941 tagttacccg tccgttaccc gctcattacc cgtaatgaac cataggcacg agctagttac
     3001 ccgctttagt tacccgcttt agttacccgc ttccaccatg gatttaacgg aagtatgaag
     3061 gttggttata gtaattgtgg gtcccaatgg ctttttattg tttggacttg atgctttatt
     3121 gcttgtacat tgtatattaa gaggagtatt ttttttagcc attagactac tccctatagt
     3181 tagttatccg ctagttaccc gctagttacc cgtcattacc cgtaactaac cataggcacc
     3241 atttagttat ccgcgttagt tacccgcatt ctccatggat ttggcgagag tgttatatgc
     3301 atgtgggacc ctcaatgctt taaattgttt atactttgtg ctatattttt tgtacattgt
     3361 tagtttttgg caattattat agggagtgtt tagttatagg attttatgag ttagttatag
     3421 gatataagtg ttgatgtggc actgatgtga cagttaagag gatgaatagt gttagtcacg
     3481 atagggagtg gccttatagg gaatgtttag ttatggatta gttatagaat attggtgttg
     3541 atgtggcgct gatgtggaag gttaagagga tgaatagttt agttacgata gggagtggcc
     3601 ttatggttta gataattggt tatgattttt cattttccat cacctgactg cttgtggaga
     3661 aaagatcaga agcctgtttt tcagtgttac atgtcagcat cattggtttg tatatatata
     3721 tcttatagta tcgtttttca catcagcttc cagttgcaac aactcgagag gaaatcaaga
     3781 gagcctatta taattgcatg aaatcctgac accaagtgga aatgatctcg atgctaccaa
     3841 gttctgcatg tttatatcat taacaacgtt tatgaggttt ggtatgaaga tgatcgaaga
     3901 aggtttcact gggattttaa cgttttatac ttcattgatg tttctataag ggtaagctga
     3961 tcttaatttt acgtaatggt tacaggtaac atatttagct ggttgtgttt gggtcaaaat
     4021 tataggtcgc tcaggttggg ctcacatgac aatacttctt ttttcttctt gttttacttg
     4081 agtaaacaat taagtaatgc agtatcaaat atggtcacac taactatgtg cttacaaatt
     4141 atgaagaacc catataatcc gtcgagcaat aaacaaaatc cagattttgg atcgttgaat
     4201 taagcccgaa attgaaatta aaatttatgc tcttttgggt acattatgtg atttgggtaa
     4261 ctggagaatt attatatata aaaatatttt agtcgattcg atttaagatg acaaaggata
     4321 aagtttttgt acatatcagg tacgaattca tcttttagtg ttgattttta attcaaaatt
     4381 ttgtgcatgc gttttacttg gatggtgagg tgatgatgaa cacgggaaga cttgcattaa
     4441 gggaatgtag tagaagagtt ccctttatta tgatgggtag aatgccgtca attaaccccg
     4501 ttatacctta tgctgccacg tgtctcatta ctcacatttt ttagcaataa caagatattt
     4561 tgccaatctg tatacccttt gcgtattagg ttagagcttc tggtatgtgt cttggttttg
     4621 gttttgctgt ttggcttcaa ctggaggtgc tggcaattta aaatggactg tggatgatgt
     4681 aatttggtga ttttgaagcc cgaaaatgat ctactgataa tcaggatgtt aagttgactt
     4741 taataggtca atttaaatgt aagctggaaa gtctgattga tatcaagcag gattatgggt
     4801 gtgtaagatg ggtcaagatt atcattgtac aaatggaatg ggtcgagatt gttgctgaac
     4861 tacaaagatt ggttaaatct gcaaatttga acatgtagat caactttgtc aaaatattgt
     4921 tacaatggga accgtgggtc aaatgtttta cattggaatc attttactgg atttatgtca
     4981 tgctagaaaa tcaagtttga ggatgatcag ctattgagaa atgtttgttg ttgttgcgca
     5041 agagagagta tttgtgatga tgttactgtt atgttgactt ataattgtca atttggaaag
     5101 tctacatgta agggttccgc tttggatcat gatgggaatt acatcagttt caatggaatt
     5161 gacaaaaaaa agctggataa taaatataat gagctgaatt tgacggagtt atggtaatca
     5221 tagtgactca agtaaagtta tgagaatgaa gactttgatg atacgatatt tttgttatta
     5281 tttgattgtt cttagtaatg aagt
//
LOCUS       XR_011778826            5145 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X3, ncRNA.
ACCESSION   XR_011778826
VERSION     XR_011778826.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5145
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5145
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..5145
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg ttagtatttc taattttttt atacgatttt
      421 caggttgtac gattcaggtt gaataccaaa ttacaatttc aatagcctat atacaattgg
      481 cttaatatca aatcaacata gctggagatc tccaaattgt atcagtcttt gcatctcttt
      541 ccttgatttc ttatatcaat taaaaatcat aatgtcactc gatttggtga ttttgattac
      601 acctgtatac tatccgaaaa ttagggttcg cgaaaattgt ttttgttctc ctatacgaga
      661 atcatctgtt ctttatcaaa ttaacatcaa gagttcacga aaaagcagga attttgacta
      721 aatgtattac gcttcggaat agtgaccgga ttttaaagcc tatctctgga aaatatccca
      781 aacaactact tcgagttcaa cttatgtgac tatataagca acctggttaa cacacacgcg
      841 tttcgcggca tgtacataaa ccctcttgtt cttaccaaaa acattacata atagatggat
      901 actaacatta ctacaaacag attatatagg ttgtgtacta aacgttggac ccatcagcga
      961 taaatgtttg agataggata aattgaaaca gaataaggta tggtggttaa tttggtttag
     1021 atatgtacgc atgtttatct ttttgacttt ttttaaacaa attagtcctg taattctgtt
     1081 atacaattca caggaaactc atattgtcat tttattggtt ttttgtggaa tcctctgtca
     1141 cgtgtaatga aagctaaaac gatcattgtt atggctatcg ctatcgtacg aagaagggtc
     1201 agtcactttc agtatctcat ttcaagaatt cataggttaa tgattaatga acatggagca
     1261 agtgttatat gtttttgacg gcttacattt gaatatccca catgtcctaa acaacgttat
     1321 tctgtgcata tctaaacaaa ctgggtctag gagatttatc aataatcaca tcagatctta
     1381 ctttttatga tgaaagatat gcagcaactc atcttggaca tcaaattggg gtttttgctt
     1441 ttttccacct tattatcgat tatacatagg tcatttttca aacagattgt acttatgtac
     1501 ttatgagctt tactcacaat aacaacaaca acaacaacaa tacccaatcc cacgaatgta
     1561 gggtacgggg gaggtggagt gtagacaatc attccccgta ctctagacta gaaggaaatc
     1621 cctactccac ttgcgggtat agaatccgcg actagataag atcgtccctc cctctactcg
     1681 agagccaaga gattgcttcc taaaggacct ccggccttac tcatgcttat attatcagta
     1741 atatctacaa atttgttccc ttttctttta ttcgatttgt aagataccat ttagtactat
     1801 aatacaaagt gttattaggg attaattggt gctgttgata catcggtgat gttaggtttg
     1861 cagcccaata tcaaaaagat agaataaatt gatctaatta cacttcttat gattacatcc
     1921 atcaaggtac tttgattatt aattataccc atcttattta acatctcttt cgttttatgt
     1981 ttttcatgtc aacttatcgt tagtatttat gattattata tatagttagt tttggtgact
     2041 gataaaaggc gtattcaggt aataaaaaat atatttcttc tttgtattct tctgggttga
     2101 tgtattgtag ccatgttaat tttaaagtta attttggtgg ctgccaaaag ctttttagcg
     2161 tttggaccat gttattttta cagtttatca tacattatcc atattgctac aggtaaacac
     2221 tatgtataag tttggttgat tattgtgggt cgtttttaca atgatgtcaa tatagtcata
     2281 cccttacatc atctaatatg tagaaaataa ttacttccct tatatcttac tttataagag
     2341 taacatacat agtaacaacc aattaatcat acaactgtac acccagttta catgcgatgg
     2401 agttgtttcc tacgtggaaa cgggaagaga ttgttatcat caaaaacatg taactgagtg
     2461 ccgtaacaaa gtcatgaaag ttgacaatca actgcaatgt atagacaaag gtgaaaaaac
     2521 aactgcacaa ccacgtaata ataaatttat aaaacaaaca gcctattaat gtagtaaaca
     2581 tcaattttat gtacattaga ccacccccta tggttagtta cccgtccgtt acccgctcat
     2641 tacccgtaat gaaccatagg cacgagctag ttacccgctt tagttacccg ctttagttac
     2701 ccgcttccac catggattta acggaagtat gaaggttggt tatagtaatt gtgggtccca
     2761 atggcttttt attgtttgga cttgatgctt tattgcttgt acattgtata ttaagaggag
     2821 tatttttttt agccattaga ctactcccta tagttagtta tccgctagtt acccgctagt
     2881 tacccgtcat tacccgtaac taaccatagg caccatttag ttatccgcgt tagttacccg
     2941 cattctccat ggatttggcg agagtgttat atgcatgtgg gaccctcaat gctttaaatt
     3001 gtttatactt tgtgctatat tttttgtaca ttgttagttt ttggcaatta ttatagggag
     3061 tgtttagtta taggatttta tgagttagtt ataggatata agtgttgatg tggcactgat
     3121 gtgacagtta agaggatgaa tagtgttagt cacgataggg agtggcctta tagggaatgt
     3181 ttagttatgg attagttata gaatattggt gttgatgtgg cgctgatgtg gaaggttaag
     3241 aggatgaata gtttagttac gatagggagt ggccttatgg tttagataat tggttatgat
     3301 ttttcatttt ccatcacctg actgcttgtg gagaaaagat cagaagcctg tttttcagtg
     3361 ttacatgtca gcatcattgg tttgtatata tatatcttat agtatcgttt ttcacatcag
     3421 cttccagttg caacaactcg agaggaaatc aagagagcct attataattg catgaaatcc
     3481 tgacaccaag tggaaatgat ctcgatgcta ccaagttctg catgtttata tcattaacaa
     3541 cgtttatgag gtgggattat ataataaaag gggttgatct aagccccttc ttttatgagt
     3601 cattttacat ttttagtctt atgaaagcaa cttctttgtg agtatgaatt tgattaacct
     3661 cattaatcta aattaattta ttttcaacat aatattgttc ttgtgtaata tttataggtt
     3721 tggtatgaag atgatcgaag aaggtttcac tgggatttta acgttttata cttcattgat
     3781 gtttctataa gggtaagctg atcttaattt tacgtaatgg ttacaggtaa catatttagc
     3841 tggttgtgtt tgggtcaaaa ttataggtcg ctcaggttgg gctcacatga caatacttct
     3901 tttttcttct tgttttactt gagtaaacaa ttaagtaatg cagtatcaaa tatggtcaca
     3961 ctaactatgt gcttacaaat tatgaagaac ccatataatc cgtcgagcaa taaacaaaat
     4021 ccagattttg gatcgttgaa ttaagcccga aattgaaatt aaaatttatg ctcttttggg
     4081 tacattatgt gatttgggta actggagaat tattatatat aaaaatattt tagtcgattc
     4141 gatttaagat gacaaaggat aaagtttttg tacatatcag gtacgaattc atcttttagt
     4201 gttgattttt aattcaaaat tttgtgcatg cgttttactt ggatggtgag gtgatgatga
     4261 acacgggaag acttgcatta agggaatgta gtagaagagt tccctttatt atgatgggta
     4321 gaatgccgtc aattaacccc gttatacctt atgctgccac gtgtctcatt actcacattt
     4381 tttagcaata acaagatatt ttgccaatct gtataccctt tgcgtattag gttagagctt
     4441 ctggtatgtg tcttggtttt ggttttgctg tttggcttca actggaggtg ctggcaattt
     4501 aaaatggact gtggatgatg taatttggtg attttgaagc ccgaaaatga tctactgata
     4561 atcaggatgt taagttgact ttaataggtc aatttaaatg taagctggaa agtctgattg
     4621 atatcaagca ggattatggg tgtgtaagat gggtcaagat tatcattgta caaatggaat
     4681 gggtcgagat tgttgctgaa ctacaaagat tggttaaatc tgcaaatttg aacatgtaga
     4741 tcaactttgt caaaatattg ttacaatggg aaccgtgggt caaatgtttt acattggaat
     4801 cattttactg gatttatgtc atgctagaaa atcaagtttg aggatgatca gctattgaga
     4861 aatgtttgtt gttgttgcgc aagagagagt atttgtgatg atgttactgt tatgttgact
     4921 tataattgtc aatttggaaa gtctacatgt aagggttccg ctttggatca tgatgggaat
     4981 tacatcagtt tcaatggaat tgacaaaaaa aagctggata ataaatataa tgagctgaat
     5041 ttgacggagt tatggtaatc atagtgactc aagtaaagtt atgagaatga agactttgat
     5101 gatacgatat ttttgttatt atttgattgt tcttagtaat gaagt
//
LOCUS       XR_011778827            5375 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X4, ncRNA.
ACCESSION   XR_011778827
VERSION     XR_011778827.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5375
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..5375
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg ttagtatttc taattttttt atacgatttt
      421 caggttgtac gattcaggtt gaataccaaa ttacaatttc aatagcctat atacaattgg
      481 cttaatatca aatcaacata gctggagatc tccaaattgt atcagtcttt gcatctcttt
      541 ccttgatttc ttatatcaat taaaaatcat aatgtcactc gatttggtga ttttgattac
      601 acctgtatac tatccgaaaa ttagggttcg cgaaaattgt ttttgttctc ctatacgaga
      661 atcatctgtt ctttatcaaa ttaacatcaa gagttcacga aaaagcagga attttgacta
      721 aatgtgagtg ttgcttatgg gtttgattta tttttggtta ttgatttaac gggtgttcat
      781 agattgagaa tttctcctct ctatctccgt tactgtttat ttcttactgt gtgtatttta
      841 ggttattaat agaaagaaga agtgtatgtg tgtgtatatc taatgattga tttttggcaa
      901 ttccagaaag gaattaattt tatgtattta gtcgtattaa tttgtataac cattagtggt
      961 ttatatagtt gtaggaaatt ttggttgtat gtgttcttat gttgtcttgg attctttttg
     1021 ctgctgtgat tgatgtatta tgcttctagg tattacgctt cggaatagtg accggatttt
     1081 aaagcctatc tctggaaaat atcccaaaca actacttcga gttcaactta tgtgactata
     1141 taagcaacct ggttaacaca cacgcgtttc gcggcatgta cataaaccct cttgttctta
     1201 ccaaaaacat tacataatag atggatacta acattactac aaacagatta tataggttgt
     1261 gtactaaacg ttggacccat cagcgataaa tgtttgagat aggataaatt gaaacagaat
     1321 aaggaaactc atattgtcat tttattggtt ttttgtggaa tcctctgtca cgtgtaatga
     1381 aagctaaaac gatcattgtt atggctatcg ctatcgtacg aagaagggtc agtcactttc
     1441 agtatctcat ttcaagaatt cataggttaa tgattaatga acatggagca agtgttatat
     1501 gtttttgacg gcttacattt gaatatccca catgtcctaa acaacgttat tctgtgcata
     1561 tctaaacaaa ctgggtctag gagatttatc aataatcaca tcagatctta ctttttatga
     1621 tgaaagatat gcagcaactc atcttggaca tcaaattggg gtttttgctt ttttccacct
     1681 tattatcgat tatacatagg tcatttttca aacagattgt acttatgtac ttatgagctt
     1741 tactcacaat aacaacaaca acaacaacaa tacccaatcc cacgaatgta gggtacgggg
     1801 gaggtggagt gtagacaatc attccccgta ctctagacta gaaggaaatc cctactccac
     1861 ttgcgggtat agaatccgcg actagataag atcgtccctc cctctactcg agagccaaga
     1921 gattgcttcc taaaggacct ccggccttac tcatgcttat attatcagta atatctacaa
     1981 atttgttccc ttttctttta ttcgatttgt aagataccat ttagtactat aatacaaagt
     2041 gttattaggg attaattggt gctgttgata catcggtgat gttaggtttg cagcccaata
     2101 tcaaaaagat agaataaatt gatctaatta cacttcttat gattacatcc atcaaggtac
     2161 tttgattatt aattataccc atcttattta acatctcttt cgttttatgt ttttcatgtc
     2221 aacttatcgt tagtatttat gattattata tatagttagt tttggtgact gataaaaggc
     2281 gtattcaggt aataaaaaat atatttcttc tttgtattct tctgggttga tgtattgtag
     2341 ccatgttaat tttaaagtta attttggtgg ctgccaaaag ctttttagcg tttggaccat
     2401 gttattttta cagtttatca tacattatcc atattgctac aggtaaacac tatgtataag
     2461 tttggttgat tattgtgggt cgtttttaca atgatgtcaa tatagtcata cccttacatc
     2521 atctaatatg tagaaaataa ttacttccct tatatcttac tttataagag taacatacat
     2581 agtaacaacc aattaatcat acaactgtac acccagttta catgcgatgg agttgtttcc
     2641 tacgtggaaa cgggaagaga ttgttatcat caaaaacatg taactgagtg ccgtaacaaa
     2701 gtcatgaaag ttgacaatca actgcaatgt atagacaaag gtgaaaaaac aactgcacaa
     2761 ccacgtaata ataaatttat aaaacaaaca gcctattaat gtagtaaaca tcaattttat
     2821 gtacattaga ccacccccta tggttagtta cccgtccgtt acccgctcat tacccgtaat
     2881 gaaccatagg cacgagctag ttacccgctt tagttacccg ctttagttac ccgcttccac
     2941 catggattta acggaagtat gaaggttggt tatagtaatt gtgggtccca atggcttttt
     3001 attgtttgga cttgatgctt tattgcttgt acattgtata ttaagaggag tatttttttt
     3061 agccattaga ctactcccta tagttagtta tccgctagtt acccgctagt tacccgtcat
     3121 tacccgtaac taaccatagg caccatttag ttatccgcgt tagttacccg cattctccat
     3181 ggatttggcg agagtgttat atgcatgtgg gaccctcaat gctttaaatt gtttatactt
     3241 tgtgctatat tttttgtaca ttgttagttt ttggcaatta ttatagggag tgtttagtta
     3301 taggatttta tgagttagtt ataggatata agtgttgatg tggcactgat gtgacagtta
     3361 agaggatgaa tagtgttagt cacgataggg agtggcctta tagggaatgt ttagttatgg
     3421 attagttata gaatattggt gttgatgtgg cgctgatgtg gaaggttaag aggatgaata
     3481 gtttagttac gatagggagt ggccttatgg tttagataat tggttatgat ttttcatttt
     3541 ccatcacctg actgcttgtg gagaaaagat cagaagcctg tttttcagtg ttacatgtca
     3601 gcatcattgg tttgtatata tatatcttat agtatcgttt ttcacatcag cttccagttg
     3661 caacaactcg agaggaaatc aagagagcct attataattg catgaaatcc tgacaccaag
     3721 tggaaatgat ctcgatgcta ccaagttctg catgtttata tcattaacaa cgtttatgag
     3781 gtgggattat ataataaaag gggttgatct aagccccttc ttttatgagt cattttacat
     3841 ttttagtctt atgaaagcaa cttctttgtg agtatgaatt tgattaacct cattaatcta
     3901 aattaattta ttttcaacat aatattgttc ttgtgtaata tttataggtt tggtatgaag
     3961 atgatcgaag aaggtttcac tgggatttta acgttttata cttcattgat gtttctataa
     4021 gggtaagctg atcttaattt tacgtaatgg ttacaggtaa catatttagc tggttgtgtt
     4081 tgggtcaaaa ttataggtcg ctcaggttgg gctcacatga caatacttct tttttcttct
     4141 tgttttactt gagtaaacaa ttaagtaatg cagtatcaaa tatggtcaca ctaactatgt
     4201 gcttacaaat tatgaagaac ccatataatc cgtcgagcaa taaacaaaat ccagattttg
     4261 gatcgttgaa ttaagcccga aattgaaatt aaaatttatg ctcttttggg tacattatgt
     4321 gatttgggta actggagaat tattatatat aaaaatattt tagtcgattc gatttaagat
     4381 gacaaaggat aaagtttttg tacatatcag gtacgaattc atcttttagt gttgattttt
     4441 aattcaaaat tttgtgcatg cgttttactt ggatggtgag gtgatgatga acacgggaag
     4501 acttgcatta agggaatgta gtagaagagt tccctttatt atgatgggta gaatgccgtc
     4561 aattaacccc gttatacctt atgctgccac gtgtctcatt actcacattt tttagcaata
     4621 acaagatatt ttgccaatct gtataccctt tgcgtattag gttagagctt ctggtatgtg
     4681 tcttggtttt ggttttgctg tttggcttca actggaggtg ctggcaattt aaaatggact
     4741 gtggatgatg taatttggtg attttgaagc ccgaaaatga tctactgata atcaggatgt
     4801 taagttgact ttaataggtc aatttaaatg taagctggaa agtctgattg atatcaagca
     4861 ggattatggg tgtgtaagat gggtcaagat tatcattgta caaatggaat gggtcgagat
     4921 tgttgctgaa ctacaaagat tggttaaatc tgcaaatttg aacatgtaga tcaactttgt
     4981 caaaatattg ttacaatggg aaccgtgggt caaatgtttt acattggaat cattttactg
     5041 gatttatgtc atgctagaaa atcaagtttg aggatgatca gctattgaga aatgtttgtt
     5101 gttgttgcgc aagagagagt atttgtgatg atgttactgt tatgttgact tataattgtc
     5161 aatttggaaa gtctacatgt aagggttccg ctttggatca tgatgggaat tacatcagtt
     5221 tcaatggaat tgacaaaaaa aagctggata ataaatataa tgagctgaat ttgacggagt
     5281 tatggtaatc atagtgactc aagtaaagtt atgagaatga agactttgat gatacgatat
     5341 ttttgttatt atttgattgt tcttagtaat gaagt
//
LOCUS       XR_011778828            4666 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X5, ncRNA.
ACCESSION   XR_011778828
VERSION     XR_011778828.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4666
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..4666
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg ttagtatttc taattttttt atacgatttt
      421 caggttgtac gattcaggtt gaataccaaa ttacaatttc aatagcctat atacaattgg
      481 cttaatatca aatcaacata gctggagatc tccaaattgt atcagtcttt gcatctcttt
      541 ccttgatttc ttatatcaat taaaaatcat aatgtcactc gatttggtga ttttgattac
      601 acctgtatac tatccgaaaa ttagggttcg cgaaaattgt ttttgttctc ctatacgaga
      661 atcatctgtt ctttatcaaa ttaacatcaa gagttcacga aaaagcagga attttgacta
      721 aatgtgagtg ttgcttatgg gtttgattta tttttggtta ttgatttaac gggtgttcat
      781 agattgagaa tttctcctct ctatctccgt tactgtttat ttcttactgt gtgtatttta
      841 ggttattaat agaaagaaga agtgtatgtg tgtgtatatc taatgattga tttttggcaa
      901 ttccagaaag gaattaattt tatgtattta gtcgtattaa tttgtataac cattagtggt
      961 ttatatagtt gtaggaaatt ttggttgtat gtgttcttat gttgtcttgg attctttttg
     1021 ctgctgtgat tgatgtatta tgcttctagg tattacgctt cggaatagtg accggatttt
     1081 aaagcctatc tctggaaaat atcccaaaca actacttcga gttcaactta tgtgactata
     1141 taagcaacct ggttaacaca cacgcgtttc gcggcatgta cataaaccct cttgttctta
     1201 ccaaaaacat tacataatag atggatacta acattactac aaacagatta tataggttgt
     1261 gtactaaacg ttggacccat cagcgataaa tgtttgagat aggataaatt gaaacagaat
     1321 aaggtatggt ggttaatttg gtttagatat gtacgcatgt ttatcttttt gacttttttt
     1381 aaacaaatta gtcctgtaat tctgttatac aattcacagg aaactcatat tgtcatttta
     1441 ttggtttttt gtggaatcct ctgtcacgtg taatgaaagc taaaacgatc attgttatgg
     1501 ctatcgctat cgtacgaaga agggtcagtc actttcagta tctcatttca agaattcata
     1561 ggttaatgat taatgaacat ggagcaagtg ttatatgttt ttgacggctt acatttgaat
     1621 atcccacatg tcctaaacaa cgttattctg tgcatatcta aacaaactgg gtctaggaga
     1681 tttatcaata atcacatcag atcttacttt ttatgatgaa agatatgcag caactcatct
     1741 tggacatcaa attggggttt ttgctttttt ccaccttatt atcgattata cataggtcat
     1801 ttttcaaaca gattgtactt atgtacttat gagctttact cacaataaca acaacaacaa
     1861 caacaatacc caatcccacg aatgtagggt acgggggagg tggagtgtag acaatcattc
     1921 cccgtactct agactagaag gaaatcccta ctccacttgc gggtatagaa tccgcgacta
     1981 gataagatcg tccctccctc tactcgagag ccaagagatt gcttcctaaa ggacctccgg
     2041 ccttactcat gcttatatta tcagtaatat ctacaaattt gttccctttt cttttattcg
     2101 atttgtaaga taccatttag tactataata caaagtgtta ttagggatta attggtgctg
     2161 ttgatacatc ggtgatgtta ggtttgcagc ccaatatcaa aaagatagaa taaattgatc
     2221 taattacact tcttatgatt acatccatca aggtactttg attattaatt atacccatct
     2281 tatttaacat ctctttcgtt ttatgttttt catgtcaact tatcgttagt atttatgatt
     2341 attatatata gttagttttg gtgactgata aaaggcgtat tcaggtaata aaaaatatat
     2401 ttcttctttg tattcttctg ggttgatgta ttgtagccat gttaatttta aagttaattt
     2461 tggtggctgc caaaagcttt ttagcgtttg gaccatgtta tttttacagt ttatcataca
     2521 ttatccatat tgctacaggt aaacactatg tataagtttg gttgattatt gtgggtcgtt
     2581 tttacaatga tgtcaatata gtcataccct tacatcatct aatatgtaga aaataattac
     2641 ttcccttata tcttacttta taagagtaac atacatagta acaaccaatt aatcatacaa
     2701 ctgtacaccc agtttacatg cgatggagtt gtttcctacg tggaaacggg aagagattgt
     2761 tatcatcaaa aacatgtaac tgagtgccgt aacaaagtca tgaaagttga caatcaactg
     2821 caatgtatag acaaaggtga aaaaacaact gcacaaccac gtaataataa atttataaaa
     2881 caaacagcct attaatgtag taaacatcaa ttttatgtac attagaccac cccctatggt
     2941 tagttacccg tccgttaccc gctcattacc cgtaatgaac cataggcacg agctagttac
     3001 ccgctttagt tacccgcttt agttacccgc ttccaccatg gatttaacgg aagtatgaag
     3061 gttggttata gtaattgtgg gtcccaatgg ctttttattg tttggacttg atgctttatt
     3121 gcttgtacat tgtatattaa gaggagtatt ttttttagcc attagactac tccctatagt
     3181 tagttatccg ctagttaccc gctagttacc cgtcattacc cgtaactaac cataggcacc
     3241 atttagttat ccgcgttagt tacccgcatt ctccatggat ttggcgagag tgttatatgc
     3301 atgtgggacc ctcaatgctt taaattgttt atactttgtg ctatattttt tgtacattgt
     3361 tagtttttgg caattattat agggagtgtt tagttatagg attttatgag ttagttatag
     3421 gatataagtg ttgatgtggc actgatgtga cagttaagag gatgaatagt gttagtcacg
     3481 atagggagtg gccttatagg gaatgtttag ttatggatta gttatagaat attggtgttg
     3541 atgtggcgct gatgtggaag gttaagagga tgaatagttt agttacgata gggagtggcc
     3601 ttatggttta gataattggt tatgattttt cattttccat cacctgactg cttgtggaga
     3661 aaagatcaga agcctgtttt tcagtgttac atgtcagcat cattggtttg tatatatata
     3721 tcttatagta tcgtttttca catcagcttc cagttgcaac aactcgagag gaaatcaaga
     3781 gagcctatta taattgcatg aaatcctgac accaagtgga aatgatctcg atgctaccaa
     3841 gttctgcatg tttatatcat taacaacgtt tatgaggttt ggtatgaaga tgatcgaaga
     3901 aggtttcact gggattttaa cgttttatac ttcattgatg tttctataag ggttagagct
     3961 tctggtatgt gtcttggttt tggttttgct gtttggcttc aactggaggt gctggcaatt
     4021 taaaatggac tgtggatgat gtaatttggt gattttgaag cccgaaaatg atctactgat
     4081 aatcaggatg ttaagttgac tttaataggt caatttaaat gtaagctgga aagtctgatt
     4141 gatatcaagc aggattatgg gtgtgtaaga tgggtcaaga ttatcattgt acaaatggaa
     4201 tgggtcgaga ttgttgctga actacaaaga ttggttaaat ctgcaaattt gaacatgtag
     4261 atcaactttg tcaaaatatt gttacaatgg gaaccgtggg tcaaatgttt tacattggaa
     4321 tcattttact ggatttatgt catgctagaa aatcaagttt gaggatgatc agctattgag
     4381 aaatgtttgt tgttgttgcg caagagagag tatttgtgat gatgttactg ttatgttgac
     4441 ttataattgt caatttggaa agtctacatg taagggttcc gctttggatc atgatgggaa
     4501 ttacatcagt ttcaatggaa ttgacaaaaa aaagctggat aataaatata atgagctgaa
     4561 tttgacggag ttatggtaat catagtgact caagtaaagt tatgagaatg aagactttga
     4621 tgatacgata tttttgttat tatttgattg ttcttagtaa tgaagt
//
LOCUS       XR_011778829            5523 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X6, ncRNA.
ACCESSION   XR_011778829
VERSION     XR_011778829.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5523
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5523
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..5523
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 gtcttcctga ggacatgtga tttcgatccc atattctcac gttgttcaac caagtgtgaa
       61 ggcaattgct tcttatcctt gataatttga gcaaccatgt accgtttatc gaagattcat
      121 acagacaatt gcaggagttg ttaccttggt tgactgtaag cacgcgatgc agcaatggaa
      181 tgaggtgaaa cctagatttg tggctaatga agcggttgaa ccagttgcgt atacagatcg
      241 tatcattatg aacaagataa tacgatgctg aaagcttcac aaatcagtcg caaaaatcaa
      301 taatgcacga ttggaagacc tagctaaaat cccctacagt cgaaagcttc acaaatcagt
      361 cgcaaaaatc aggatctcag attcgggtca ttttggtcaa tcaatatccg ttgttgacta
      421 atcgtcaccc ttcaatcacg ggttagtatt tctaattttt ttatacgatt ttcaggttgt
      481 acgattcagg ttgaatacca aattacaatt tcaatagcct atatacaatt ggcttaatat
      541 caaatcaaca tagctggaga tctccaaatt gtatcagtct ttgcatctct ttccttgatt
      601 tcttatatca attaaaaatc ataatgtcac tcgatttggt gattttgatt acacctgtat
      661 actatccgaa aattagggtt cgcgaaaatt gtttttgttc tcctatacga gaatcatctg
      721 ttctttatca aattaacatc aagagttcac gaaaaagcag gaattttgac taaatgtgag
      781 tgttgcttat gggtttgatt tatttttggt tattgattta acgggtgttc atagattgag
      841 aatttctcct ctctatctcc gttactgttt atttcttact gtgtgtattt taggttatta
      901 atagaaagaa gaagtgtatg tgtgtgtata tctaatgatt gatttttggc aattccagaa
      961 aggaattaat tttatgtatt tagtcgtatt aatttgtata accattagtg gtttatatag
     1021 ttgtaggaaa ttttggttgt atgtgttctt atgttgtctt ggattctttt tgctgctgtg
     1081 attgatgtat tatgcttcta ggtattacgc ttcggaatag tgaccggatt ttaaagccta
     1141 tctctggaaa atatcccaaa caactacttc gagttcaact tatgtgacta tataagcaac
     1201 ctggttaaca cacacgcgtt tcgcggcatg tacataaacc ctcttgttct taccaaaaac
     1261 attacataat agatggatac taacattact acaaacagat tatataggtt gtgtactaaa
     1321 cgttggaccc atcagcgata aatgtttgag ataggataaa ttgaaacaga ataaggtatg
     1381 gtggttaatt tggtttagat atgtacgcat gtttatcttt ttgacttttt ttaaacaaat
     1441 tagtcctgta attctgttat acaattcaca ggaaactcat attgtcattt tattggtttt
     1501 ttgtggaatc ctctgtcacg tgtaatgaaa gctaaaacga tcattgttat ggctatcgct
     1561 atcgtacgaa gaagggtcag tcactttcag tatctcattt caagaattca taggttaatg
     1621 attaatgaac atggagcaag tgttatatgt ttttgacggc ttacatttga atatcccaca
     1681 tgtcctaaac aacgttattc tgtgcatatc taaacaaact gggtctagga gatttatcaa
     1741 taatcacatc agatcttact ttttatgatg aaagatatgc agcaactcat cttggacatc
     1801 aaattggggt ttttgctttt ttccacctta ttatcgatta tacataggtc atttttcaaa
     1861 cagattgtac ttatgtactt atgagcttta ctcacaataa caacaacaac aacaacaata
     1921 cccaatccca cgaatgtagg gtacggggga ggtggagtgt agacaatcat tccccgtact
     1981 ctagactaga aggaaatccc tactccactt gcgggtatag aatccgcgac tagataagat
     2041 cgtccctccc tctactcgag agccaagaga ttgcttccta aaggacctcc ggccttactc
     2101 atgcttatat tatcagtaat atctacaaat ttgttccctt ttcttttatt cgatttgtaa
     2161 gataccattt agtactataa tacaaagtgt tattagggat taattggtgc tgttgataca
     2221 tcggtgatgt taggtttgca gcccaatatc aaaaagatag aataaattga tctaattaca
     2281 cttcttatga ttacatccat caaggtactt tgattattaa ttatacccat cttatttaac
     2341 atctctttcg ttttatgttt ttcatgtcaa cttatcgtta gtatttatga ttattatata
     2401 tagttagttt tggtgactga taaaaggcgt attcaggtaa taaaaaatat atttcttctt
     2461 tgtattcttc tgggttgatg tattgtagcc atgttaattt taaagttaat tttggtggct
     2521 gccaaaagct ttttagcgtt tggaccatgt tatttttaca gtttatcata cattatccat
     2581 attgctacag gtaaacacta tgtataagtt tggttgatta ttgtgggtcg tttttacaat
     2641 gatgtcaata tagtcatacc cttacatcat ctaatatgta gaaaataatt acttccctta
     2701 tatcttactt tataagagta acatacatag taacaaccaa ttaatcatac aactgtacac
     2761 ccagtttaca tgcgatggag ttgtttccta cgtggaaacg ggaagagatt gttatcatca
     2821 aaaacatgta actgagtgcc gtaacaaagt catgaaagtt gacaatcaac tgcaatgtat
     2881 agacaaaggt gaaaaaacaa ctgcacaacc acgtaataat aaatttataa aacaaacagc
     2941 ctattaatgt agtaaacatc aattttatgt acattagacc accccctatg gttagttacc
     3001 cgtccgttac ccgctcatta cccgtaatga accataggca cgagctagtt acccgcttta
     3061 gttacccgct ttagttaccc gcttccacca tggatttaac ggaagtatga aggttggtta
     3121 tagtaattgt gggtcccaat ggctttttat tgtttggact tgatgcttta ttgcttgtac
     3181 attgtatatt aagaggagta ttttttttag ccattagact actccctata gttagttatc
     3241 cgctagttac ccgctagtta cccgtcatta cccgtaacta accataggca ccatttagtt
     3301 atccgcgtta gttacccgca ttctccatgg atttggcgag agtgttatat gcatgtggga
     3361 ccctcaatgc tttaaattgt ttatactttg tgctatattt tttgtacatt gttagttttt
     3421 ggcaattatt atagggagtg tttagttata ggattttatg agttagttat aggatataag
     3481 tgttgatgtg gcactgatgt gacagttaag aggatgaata gtgttagtca cgatagggag
     3541 tggccttata gggaatgttt agttatggat tagttataga atattggtgt tgatgtggcg
     3601 ctgatgtgga aggttaagag gatgaatagt ttagttacga tagggagtgg ccttatggtt
     3661 tagataattg gttatgattt ttcattttcc atcacctgac tgcttgtgga gaaaagatca
     3721 gaagcctgtt tttcagtgtt acatgtcagc atcattggtt tgtatatata tatcttatag
     3781 tatcgttttt cacatcagct tccagttgca acaactcgag aggaaatcaa gagagcctat
     3841 tataattgca tgaaatcctg acaccaagtg gaaatgatct cgatgctacc aagttctgca
     3901 tgtttatatc attaacaacg tttatgaggt gggattatat aataaaaggg gttgatctaa
     3961 gccccttctt ttatgagtca ttttacattt ttagtcttat gaaagcaact tctttgtgag
     4021 tatgaatttg attaacctca ttaatctaaa ttaatttatt ttcaacataa tattgttctt
     4081 gtgtaatatt tataggtttg gtatgaagat gatcgaagaa ggtttcactg ggattttaac
     4141 gttttatact tcattgatgt ttctataagg gtaagctgat cttaatttta cgtaatggtt
     4201 acaggtaaca tatttagctg gttgtgtttg ggtcaaaatt ataggtcgct caggttgggc
     4261 tcacatgaca atacttcttt tttcttcttg ttttacttga gtaaacaatt aagtaatgca
     4321 gtatcaaata tggtcacact aactatgtgc ttacaaatta tgaagaaccc atataatccg
     4381 tcgagcaata aacaaaatcc agattttgga tcgttgaatt aagcccgaaa ttgaaattaa
     4441 aatttatgct cttttgggta cattatgtga tttgggtaac tggagaatta ttatatataa
     4501 aaatatttta gtcgattcga tttaagatga caaaggataa agtttttgta catatcaggt
     4561 acgaattcat cttttagtgt tgatttttaa ttcaaaattt tgtgcatgcg ttttacttgg
     4621 atggtgaggt gatgatgaac acgggaagac ttgcattaag ggaatgtagt agaagagttc
     4681 cctttattat gatgggtaga atgccgtcaa ttaaccccgt tataccttat gctgccacgt
     4741 gtctcattac tcacattttt tagcaataac aagatatttt gccaatctgt ataccctttg
     4801 cgtattaggt tagagcttct ggtatgtgtc ttggttttgg ttttgctgtt tggcttcaac
     4861 tggaggtgct ggcaatttaa aatggactgt ggatgatgta atttggtgat tttgaagccc
     4921 gaaaatgatc tactgataat caggatgtta agttgacttt aataggtcaa tttaaatgta
     4981 agctggaaag tctgattgat atcaagcagg attatgggtg tgtaagatgg gtcaagatta
     5041 tcattgtaca aatggaatgg gtcgagattg ttgctgaact acaaagattg gttaaatctg
     5101 caaatttgaa catgtagatc aactttgtca aaatattgtt acaatgggaa ccgtgggtca
     5161 aatgttttac attggaatca ttttactgga tttatgtcat gctagaaaat caagtttgag
     5221 gatgatcagc tattgagaaa tgtttgttgt tgttgcgcaa gagagagtat ttgtgatgat
     5281 gttactgtta tgttgactta taattgtcaa tttggaaagt ctacatgtaa gggttccgct
     5341 ttggatcatg atgggaatta catcagtttc aatggaattg acaaaaaaaa gctggataat
     5401 aaatataatg agctgaattt gacggagtta tggtaatcat agtgactcaa gtaaagttat
     5461 gagaatgaag actttgatga tacgatattt ttgttattat ttgattgttc ttagtaatga
     5521 agt
//
LOCUS       XR_011778830            4561 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X7, ncRNA.
ACCESSION   XR_011778830
VERSION     XR_011778830.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4561
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..4561
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg ttagtatttc taattttttt atacgatttt
      421 caggttgtac gattcaggtt gaataccaaa ttacaatttc aatagcctat atacaattgg
      481 cttaatatca aatcaacata gctggagatc tccaaattgt atcagtcttt gcatctcttt
      541 ccttgatttc ttatatcaat taaaaatcat aatgtcactc gatttggtga ttttgattac
      601 acctgtatac tatccgaaaa ttagggttcg cgaaaattgt ttttgttctc ctatacgaga
      661 atcatctgtt ctttatcaaa ttaacatcaa gagttcacga aaaagcagga attttgacta
      721 aatgtgagtg ttgcttatgg gtttgattta tttttggtta ttgatttaac gggtgttcat
      781 agattgagaa tttctcctct ctatctccgt tactgtttat ttcttactgt gtgtatttta
      841 ggttattaat agaaagaaga agtgtatgtg tgtgtatatc taatgattga tttttggcaa
      901 ttccagaaag gaattaattt tatgtattta gtcgtattaa tttgtataac cattagtggt
      961 ttatatagtt gtaggaaatt ttggttgtat gtgttcttat gttgtcttgg attctttttg
     1021 ctgctgtgat tgatgtatta tgcttctagg tattacgctt cggaatagtg accggatttt
     1081 aaagcctatc tctggaaaat atcccaaaca actacttcga gttcaactta tgtgactata
     1141 taagcaacct ggttaacaca cacgcgtttc gcggcatgta cataaaccct cttgttctta
     1201 ccaaaaacat tacataatag atggatacta acattactac aaacagatta tataggttgt
     1261 gtactaaacg ttggacccat cagcgataaa tgtttgagat aggataaatt gaaacagaat
     1321 aaggtatggt ggttaatttg gtttagatat gtacgcatgt ttatcttttt gacttttttt
     1381 aaacaaatta gtcctgtaat tctgttatac aattcacagg aaactcatat tgtcatttta
     1441 ttggtttttt gtggaatcct ctgtcacgtg taatgaaagc taaaacgatc attgttatgg
     1501 ctatcgctat cgtacgaaga agggtcagtc actttcagta tctcatttca agaattcata
     1561 ggttaatgat taatgaacat ggagcaagtg ttatatgttt ttgacggctt acatttgaat
     1621 atcccacatg tcctaaacaa cgttattctg tgcatatcta aacaaactgg gtctaggaga
     1681 tttatcaata atcacatcag atcttacttt ttatgatgaa agatatgcag caactcatct
     1741 tggacatcaa attggggttt ttgctttttt ccaccttatt atcgattata cataggtcat
     1801 ttttcaaaca gattgtactt atgtacttat gagctttact cacaataaca acaacaacaa
     1861 caacaatacc caatcccacg aatgtagggt acgggggagg tggagtgtag acaatcattc
     1921 cccgtactct agactagaag gaaatcccta ctccacttgc gggtatagaa tccgcgacta
     1981 gataagatcg tccctccctc tactcgagag ccaagagatt gcttcctaaa ggacctccgg
     2041 ccttactcat gcttatatta tcagtaatat ctacaaattt gttccctttt cttttattcg
     2101 atttgtaaga taccatttag tactataata caaagtgtta ttagggatta attggtgctg
     2161 ttgatacatc ggtgatgtta ggtttgcagc ccaatatcaa aaagatagaa taaattgatc
     2221 taattacact tcttatgatt acatccatca aggtactttg attattaatt atacccatct
     2281 tatttaacat ctctttcgtt ttatgttttt catgtcaact tatcgttagt atttatgatt
     2341 attatatata gttagttttg gtgactgata aaaggcgtat tcaggtaata aaaaatatat
     2401 ttcttctttg tattcttctg ggttgatgta ttgtagccat gttaatttta aagttaattt
     2461 tggtggctgc caaaagcttt ttagcgtttg gaccatgtta tttttacagt ttatcataca
     2521 ttatccatat tgctacaggt aaacactatg tataagtttg gttgattatt gtgggtcgtt
     2581 tttacaatga tgtcaatata gtcataccct tacatcatct aatatgtaga aaataattac
     2641 ttcccttata tcttacttta taagagtaac atacatagta acaaccaatt aatcatacaa
     2701 ctgtacaccc agtttacatg cgatggagtt gtttcctacg tggaaacggg aagagattgt
     2761 tatcatcaaa aacatgtaac tgagtgccgt aacaaagtca tgaaagttga caatcaactg
     2821 caatgtatag acaaagcttc cagttgcaac aactcgagag gaaatcaaga gagcctatta
     2881 taattgcatg aaatcctgac accaagtgga aatgatctcg atgctaccaa gttctgcatg
     2941 tttatatcat taacaacgtt tatgaggtgg gattatataa taaaaggggt tgatctaagc
     3001 cccttctttt atgagtcatt ttacattttt agtcttatga aagcaacttc tttgtgagta
     3061 tgaatttgat taacctcatt aatctaaatt aatttatttt caacataata ttgttcttgt
     3121 gtaatattta taggtttggt atgaagatga tcgaagaagg tttcactggg attttaacgt
     3181 tttatacttc attgatgttt ctataagggt aagctgatct taattttacg taatggttac
     3241 aggtaacata tttagctggt tgtgtttggg tcaaaattat aggtcgctca ggttgggctc
     3301 acatgacaat acttcttttt tcttcttgtt ttacttgagt aaacaattaa gtaatgcagt
     3361 atcaaatatg gtcacactaa ctatgtgctt acaaattatg aagaacccat ataatccgtc
     3421 gagcaataaa caaaatccag attttggatc gttgaattaa gcccgaaatt gaaattaaaa
     3481 tttatgctct tttgggtaca ttatgtgatt tgggtaactg gagaattatt atatataaaa
     3541 atattttagt cgattcgatt taagatgaca aaggataaag tttttgtaca tatcaggtac
     3601 gaattcatct tttagtgttg atttttaatt caaaattttg tgcatgcgtt ttacttggat
     3661 ggtgaggtga tgatgaacac gggaagactt gcattaaggg aatgtagtag aagagttccc
     3721 tttattatga tgggtagaat gccgtcaatt aaccccgtta taccttatgc tgccacgtgt
     3781 ctcattactc acatttttta gcaataacaa gatattttgc caatctgtat accctttgcg
     3841 tattaggtta gagcttctgg tatgtgtctt ggttttggtt ttgctgtttg gcttcaactg
     3901 gaggtgctgg caatttaaaa tggactgtgg atgatgtaat ttggtgattt tgaagcccga
     3961 aaatgatcta ctgataatca ggatgttaag ttgactttaa taggtcaatt taaatgtaag
     4021 ctggaaagtc tgattgatat caagcaggat tatgggtgtg taagatgggt caagattatc
     4081 attgtacaaa tggaatgggt cgagattgtt gctgaactac aaagattggt taaatctgca
     4141 aatttgaaca tgtagatcaa ctttgtcaaa atattgttac aatgggaacc gtgggtcaaa
     4201 tgttttacat tggaatcatt ttactggatt tatgtcatgc tagaaaatca agtttgagga
     4261 tgatcagcta ttgagaaatg tttgttgttg ttgcgcaaga gagagtattt gtgatgatgt
     4321 tactgttatg ttgacttata attgtcaatt tggaaagtct acatgtaagg gttccgcttt
     4381 ggatcatgat gggaattaca tcagtttcaa tggaattgac aaaaaaaagc tggataataa
     4441 atataatgag ctgaatttga cggagttatg gtaatcatag tgactcaagt aaagttatga
     4501 gaatgaagac tttgatgata cgatattttt gttattattt gattgttctt agtaatgaag
     4561 t
//
LOCUS       XR_011778831            4811 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X8, ncRNA.
ACCESSION   XR_011778831
VERSION     XR_011778831.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4811
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4811
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..4811
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg tattacgctt cggaatagtg accggatttt
      421 aaagcctatc tctggaaaat atcccaaaca actacttcga gttcaactta tgtgactata
      481 taagcaacct ggttaacaca cacgcgtttc gcggcatgta cataaaccct cttgttctta
      541 ccaaaaacat tacataatag atggatacta acattactac aaacagatta tataggttgt
      601 gtactaaacg ttggacccat cagcgataaa tgtttgagat aggataaatt gaaacagaat
      661 aaggtatggt ggttaatttg gtttagatat gtacgcatgt ttatcttttt gacttttttt
      721 aaacaaatta gtcctgtaat tctgttatac aattcacagg aaactcatat tgtcatttta
      781 ttggtttttt gtggaatcct ctgtcacgtg taatgaaagc taaaacgatc attgttatgg
      841 ctatcgctat cgtacgaaga agggtcagtc actttcagta tctcatttca agaattcata
      901 ggttaatgat taatgaacat ggagcaagtg ttatatgttt ttgacggctt acatttgaat
      961 atcccacatg tcctaaacaa cgttattctg tgcatatcta aacaaactgg gtctaggaga
     1021 tttatcaata atcacatcag atcttacttt ttatgatgaa agatatgcag caactcatct
     1081 tggacatcaa attggggttt ttgctttttt ccaccttatt atcgattata cataggtcat
     1141 ttttcaaaca gattgtactt atgtacttat gagctttact cacaataaca acaacaacaa
     1201 caacaatacc caatcccacg aatgtagggt acgggggagg tggagtgtag acaatcattc
     1261 cccgtactct agactagaag gaaatcccta ctccacttgc gggtatagaa tccgcgacta
     1321 gataagatcg tccctccctc tactcgagag ccaagagatt gcttcctaaa ggacctccgg
     1381 ccttactcat gcttatatta tcagtaatat ctacaaattt gttccctttt cttttattcg
     1441 atttgtaaga taccatttag tactataata caaagtgtta ttagggatta attggtgctg
     1501 ttgatacatc ggtgatgtta ggtttgcagc ccaatatcaa aaagatagaa taaattgatc
     1561 taattacact tcttatgatt acatccatca aggtactttg attattaatt atacccatct
     1621 tatttaacat ctctttcgtt ttatgttttt catgtcaact tatcgttagt atttatgatt
     1681 attatatata gttagttttg gtgactgata aaaggcgtat tcaggtaata aaaaatatat
     1741 ttcttctttg tattcttctg ggttgatgta ttgtagccat gttaatttta aagttaattt
     1801 tggtggctgc caaaagcttt ttagcgtttg gaccatgtta tttttacagt ttatcataca
     1861 ttatccatat tgctacaggt aaacactatg tataagtttg gttgattatt gtgggtcgtt
     1921 tttacaatga tgtcaatata gtcataccct tacatcatct aatatgtaga aaataattac
     1981 ttcccttata tcttacttta taagagtaac atacatagta acaaccaatt aatcatacaa
     2041 ctgtacaccc agtttacatg cgatggagtt gtttcctacg tggaaacggg aagagattgt
     2101 tatcatcaaa aacatgtaac tgagtgccgt aacaaagtca tgaaagttga caatcaactg
     2161 caatgtatag acaaaggtga aaaaacaact gcacaaccac gtaataataa atttataaaa
     2221 caaacagcct attaatgtag taaacatcaa ttttatgtac attagaccac cccctatggt
     2281 tagttacccg tccgttaccc gctcattacc cgtaatgaac cataggcacg agctagttac
     2341 ccgctttagt tacccgcttt agttacccgc ttccaccatg gatttaacgg aagtatgaag
     2401 gttggttata gtaattgtgg gtcccaatgg ctttttattg tttggacttg atgctttatt
     2461 gcttgtacat tgtatattaa gaggagtatt ttttttagcc attagactac tccctatagt
     2521 tagttatccg ctagttaccc gctagttacc cgtcattacc cgtaactaac cataggcacc
     2581 atttagttat ccgcgttagt tacccgcatt ctccatggat ttggcgagag tgttatatgc
     2641 atgtgggacc ctcaatgctt taaattgttt atactttgtg ctatattttt tgtacattgt
     2701 tagtttttgg caattattat agggagtgtt tagttatagg attttatgag ttagttatag
     2761 gatataagtg ttgatgtggc actgatgtga cagttaagag gatgaatagt gttagtcacg
     2821 atagggagtg gccttatagg gaatgtttag ttatggatta gttatagaat attggtgttg
     2881 atgtggcgct gatgtggaag gttaagagga tgaatagttt agttacgata gggagtggcc
     2941 ttatggttta gataattggt tatgattttt cattttccat cacctgactg cttgtggaga
     3001 aaagatcaga agcctgtttt tcagtgttac atgtcagcat cattggtttg tatatatata
     3061 tcttatagta tcgtttttca catcagcttc cagttgcaac aactcgagag gaaatcaaga
     3121 gagcctatta taattgcatg aaatcctgac accaagtgga aatgatctcg atgctaccaa
     3181 gttctgcatg tttatatcat taacaacgtt tatgaggtgg gattatataa taaaaggggt
     3241 tgatctaagc cccttctttt atgagtcatt ttacattttt agtcttatga aagcaacttc
     3301 tttgtgagta tgaatttgat taacctcatt aatctaaatt aatttatttt caacataata
     3361 ttgttcttgt gtaatattta taggtttggt atgaagatga tcgaagaagg tttcactggg
     3421 attttaacgt tttatacttc attgatgttt ctataagggt aagctgatct taattttacg
     3481 taatggttac aggtaacata tttagctggt tgtgtttggg tcaaaattat aggtcgctca
     3541 ggttgggctc acatgacaat acttcttttt tcttcttgtt ttacttgagt aaacaattaa
     3601 gtaatgcagt atcaaatatg gtcacactaa ctatgtgctt acaaattatg aagaacccat
     3661 ataatccgtc gagcaataaa caaaatccag attttggatc gttgaattaa gcccgaaatt
     3721 gaaattaaaa tttatgctct tttgggtaca ttatgtgatt tgggtaactg gagaattatt
     3781 atatataaaa atattttagt cgattcgatt taagatgaca aaggataaag tttttgtaca
     3841 tatcaggtac gaattcatct tttagtgttg atttttaatt caaaattttg tgcatgcgtt
     3901 ttacttggat ggtgaggtga tgatgaacac gggaagactt gcattaaggg aatgtagtag
     3961 aagagttccc tttattatga tgggtagaat gccgtcaatt aaccccgtta taccttatgc
     4021 tgccacgtgt ctcattactc acatttttta gcaataacaa gatattttgc caatctgtat
     4081 accctttgcg tattaggtta gagcttctgg tatgtgtctt ggttttggtt ttgctgtttg
     4141 gcttcaactg gaggtgctgg caatttaaaa tggactgtgg atgatgtaat ttggtgattt
     4201 tgaagcccga aaatgatcta ctgataatca ggatgttaag ttgactttaa taggtcaatt
     4261 taaatgtaag ctggaaagtc tgattgatat caagcaggat tatgggtgtg taagatgggt
     4321 caagattatc attgtacaaa tggaatgggt cgagattgtt gctgaactac aaagattggt
     4381 taaatctgca aatttgaaca tgtagatcaa ctttgtcaaa atattgttac aatgggaacc
     4441 gtgggtcaaa tgttttacat tggaatcatt ttactggatt tatgtcatgc tagaaaatca
     4501 agtttgagga tgatcagcta ttgagaaatg tttgttgttg ttgcgcaaga gagagtattt
     4561 gtgatgatgt tactgttatg ttgacttata attgtcaatt tggaaagtct acatgtaagg
     4621 gttccgcttt ggatcatgat gggaattaca tcagtttcaa tggaattgac aaaaaaaagc
     4681 tggataataa atataatgag ctgaatttga cggagttatg gtaatcatag tgactcaagt
     4741 aaagttatga gaatgaagac tttgatgata cgatattttt gttattattt gattgttctt
     4801 agtaatgaag t
//
LOCUS       XR_011778832            5398 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X9, ncRNA.
ACCESSION   XR_011778832
VERSION     XR_011778832.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5398
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5398
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..5398
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg ttagtatttc taattttttt atacgatttt
      421 caggttgtac gattcaggtt gaataccaaa ttacaatttc aatagcctat atacaattgg
      481 cttaatatca aatcaacata gctggagatc tccaaattgt atcagtcttt gcatctcttt
      541 ccttgatttc ttatatcaat taaaaatcat aatgtcactc gatttggtga ttttgattac
      601 acctgtatac tatccgaaaa ttagggttcg cgaaaattgt ttttgttctc ctatacgaga
      661 atcatctgtt ctttatcaaa ttaacatcaa gagttcacga aaaagcagga attttgacta
      721 aatgtgagtg ttgcttatgg gtttgattta tttttggtta ttgatttaac gggtgttcat
      781 agattgagaa tttctcctct ctatctccgt tactgtttat ttcttactgt gtgtatttta
      841 ggttattaat agaaagaaga agtgtatgtg tgtgtatatc taatgattga tttttggcaa
      901 ttccagaaag gaattaattt tatgtattta gtcgtattaa tttgtataac cattagtggt
      961 ttatatagtt gtaggaaatt ttggttgtat gtgttcttat gttgtcttgg attctttttg
     1021 ctgctgtgat tgatgtatta tgcttctagg tattacgctt cggaatagtg accggatttt
     1081 aaagcctatc tctggaaaat atcccaaaca actacttcga gttcaactta tgtgactata
     1141 taagcaacct ggttaacaca cacgcgtttc gcgattatat aggttgtgta ctaaacgttg
     1201 gacccatcag cgataaatgt ttgagatagg ataaattgaa acagaataag gtatggtggt
     1261 taatttggtt tagatatgta cgcatgttta tctttttgac tttttttaaa caaattagtc
     1321 ctgtaattct gttatacaat tcacaggaaa ctcatattgt cattttattg gttttttgtg
     1381 gaatcctctg tcacgtgtaa tgaaagctaa aacgatcatt gttatggcta tcgctatcgt
     1441 acgaagaagg gtcagtcact ttcagtatct catttcaaga attcataggt taatgattaa
     1501 tgaacatgga gcaagtgtta tatgtttttg acggcttaca tttgaatatc ccacatgtcc
     1561 taaacaacgt tattctgtgc atatctaaac aaactgggtc taggagattt atcaataatc
     1621 acatcagatc ttacttttta tgatgaaaga tatgcagcaa ctcatcttgg acatcaaatt
     1681 ggggtttttg cttttttcca ccttattatc gattatacat aggtcatttt tcaaacagat
     1741 tgtacttatg tacttatgag ctttactcac aataacaaca acaacaacaa caatacccaa
     1801 tcccacgaat gtagggtacg ggggaggtgg agtgtagaca atcattcccc gtactctaga
     1861 ctagaaggaa atccctactc cacttgcggg tatagaatcc gcgactagat aagatcgtcc
     1921 ctccctctac tcgagagcca agagattgct tcctaaagga cctccggcct tactcatgct
     1981 tatattatca gtaatatcta caaatttgtt cccttttctt ttattcgatt tgtaagatac
     2041 catttagtac tataatacaa agtgttatta gggattaatt ggtgctgttg atacatcggt
     2101 gatgttaggt ttgcagccca atatcaaaaa gatagaataa attgatctaa ttacacttct
     2161 tatgattaca tccatcaagg tactttgatt attaattata cccatcttat ttaacatctc
     2221 tttcgtttta tgtttttcat gtcaacttat cgttagtatt tatgattatt atatatagtt
     2281 agttttggtg actgataaaa ggcgtattca ggtaataaaa aatatatttc ttctttgtat
     2341 tcttctgggt tgatgtattg tagccatgtt aattttaaag ttaattttgg tggctgccaa
     2401 aagcttttta gcgtttggac catgttattt ttacagttta tcatacatta tccatattgc
     2461 tacaggtaaa cactatgtat aagtttggtt gattattgtg ggtcgttttt acaatgatgt
     2521 caatatagtc atacccttac atcatctaat atgtagaaaa taattacttc ccttatatct
     2581 tactttataa gagtaacata catagtaaca accaattaat catacaactg tacacccagt
     2641 ttacatgcga tggagttgtt tcctacgtgg aaacgggaag agattgttat catcaaaaac
     2701 atgtaactga gtgccgtaac aaagtcatga aagttgacaa tcaactgcaa tgtatagaca
     2761 aaggtgaaaa aacaactgca caaccacgta ataataaatt tataaaacaa acagcctatt
     2821 aatgtagtaa acatcaattt tatgtacatt agaccacccc ctatggttag ttacccgtcc
     2881 gttacccgct cattacccgt aatgaaccat aggcacgagc tagttacccg ctttagttac
     2941 ccgctttagt tacccgcttc caccatggat ttaacggaag tatgaaggtt ggttatagta
     3001 attgtgggtc ccaatggctt tttattgttt ggacttgatg ctttattgct tgtacattgt
     3061 atattaagag gagtattttt tttagccatt agactactcc ctatagttag ttatccgcta
     3121 gttacccgct agttacccgt cattacccgt aactaaccat aggcaccatt tagttatccg
     3181 cgttagttac ccgcattctc catggatttg gcgagagtgt tatatgcatg tgggaccctc
     3241 aatgctttaa attgtttata ctttgtgcta tattttttgt acattgttag tttttggcaa
     3301 ttattatagg gagtgtttag ttataggatt ttatgagtta gttataggat ataagtgttg
     3361 atgtggcact gatgtgacag ttaagaggat gaatagtgtt agtcacgata gggagtggcc
     3421 ttatagggaa tgtttagtta tggattagtt atagaatatt ggtgttgatg tggcgctgat
     3481 gtggaaggtt aagaggatga atagtttagt tacgataggg agtggcctta tggtttagat
     3541 aattggttat gatttttcat tttccatcac ctgactgctt gtggagaaaa gatcagaagc
     3601 ctgtttttca gtgttacatg tcagcatcat tggtttgtat atatatatct tatagtatcg
     3661 tttttcacat cagcttccag ttgcaacaac tcgagaggaa atcaagagag cctattataa
     3721 ttgcatgaaa tcctgacacc aagtggaaat gatctcgatg ctaccaagtt ctgcatgttt
     3781 atatcattaa caacgtttat gaggtgggat tatataataa aaggggttga tctaagcccc
     3841 ttcttttatg agtcatttta catttttagt cttatgaaag caacttcttt gtgagtatga
     3901 atttgattaa cctcattaat ctaaattaat ttattttcaa cataatattg ttcttgtgta
     3961 atatttatag gtttggtatg aagatgatcg aagaaggttt cactgggatt ttaacgtttt
     4021 atacttcatt gatgtttcta taagggtaag ctgatcttaa ttttacgtaa tggttacagg
     4081 taacatattt agctggttgt gtttgggtca aaattatagg tcgctcaggt tgggctcaca
     4141 tgacaatact tcttttttct tcttgtttta cttgagtaaa caattaagta atgcagtatc
     4201 aaatatggtc acactaacta tgtgcttaca aattatgaag aacccatata atccgtcgag
     4261 caataaacaa aatccagatt ttggatcgtt gaattaagcc cgaaattgaa attaaaattt
     4321 atgctctttt gggtacatta tgtgatttgg gtaactggag aattattata tataaaaata
     4381 ttttagtcga ttcgatttaa gatgacaaag gataaagttt ttgtacatat caggtacgaa
     4441 ttcatctttt agtgttgatt tttaattcaa aattttgtgc atgcgtttta cttggatggt
     4501 gaggtgatga tgaacacggg aagacttgca ttaagggaat gtagtagaag agttcccttt
     4561 attatgatgg gtagaatgcc gtcaattaac cccgttatac cttatgctgc cacgtgtctc
     4621 attactcaca ttttttagca ataacaagat attttgccaa tctgtatacc ctttgcgtat
     4681 taggttagag cttctggtat gtgtcttggt tttggttttg ctgtttggct tcaactggag
     4741 gtgctggcaa tttaaaatgg actgtggatg atgtaatttg gtgattttga agcccgaaaa
     4801 tgatctactg ataatcagga tgttaagttg actttaatag gtcaatttaa atgtaagctg
     4861 gaaagtctga ttgatatcaa gcaggattat gggtgtgtaa gatgggtcaa gattatcatt
     4921 gtacaaatgg aatgggtcga gattgttgct gaactacaaa gattggttaa atctgcaaat
     4981 ttgaacatgt agatcaactt tgtcaaaata ttgttacaat gggaaccgtg ggtcaaatgt
     5041 tttacattgg aatcatttta ctggatttat gtcatgctag aaaatcaagt ttgaggatga
     5101 tcagctattg agaaatgttt gttgttgttg cgcaagagag agtatttgtg atgatgttac
     5161 tgttatgttg acttataatt gtcaatttgg aaagtctaca tgtaagggtt ccgctttgga
     5221 tcatgatggg aattacatca gtttcaatgg aattgacaaa aaaaagctgg ataataaata
     5281 taatgagctg aatttgacgg agttatggta atcatagtga ctcaagtaaa gttatgagaa
     5341 tgaagacttt gatgatacga tatttttgtt attatttgat tgttcttagt aatgaagt
//
LOCUS       XR_011778833            5302 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904471), transcript variant X10, ncRNA.
ACCESSION   XR_011778833
VERSION     XR_011778833.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5302
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5302
                     /gene="LOC139904471"
                     /note="uncharacterized LOC139904471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904471"
     ncRNA           1..5302
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904471"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /db_xref="GeneID:139904471"
ORIGIN      
        1 tgtgttgttg tgaatagttt ttatattctc aaatttctct gaattagggt ttatgttctc
       61 agattcatac agacaattgc aggagttgtt accttggttg actgtaagca cgcgatgcag
      121 caatggaatg aggtgaaacc tagatttgtg gctaatgaag cggttgaacc agttgcgtat
      181 acagatcgta tcattatgaa caagataata cgatgctgaa agcttcacaa atcagtcgca
      241 aaaatcaata atgcacgatt ggaagaccta gctaaaatcc cctacagtcg aaagcttcac
      301 aaatcagtcg caaaaatcag gatctcagat tcgggtcatt ttggtcaatc aatatccgtt
      361 gttgactaat cgtcaccctt caatcacggg ttagtatttc taattttttt atacgatttt
      421 caggttgtac gattcaggtt gaataccaaa ttacaatttc aatagcctat atacaattgg
      481 cttaatatca aatcaacata gctggagatc tccaaattgt atcagtcttt gcatctcttt
      541 ccttgatttc ttatatcaat taaaaatcat aatgtcactc gatttggtga ttttgattac
      601 acctgtatac tatccgaaaa ttagggttcg cgaaaattgt ttttgttctc ctatacgaga
      661 atcatctgtt ctttatcaaa ttaacatcaa gagttcacga aaaagcagga attttgacta
      721 aatgtgagtg ttgcttatgg gtttgattta tttttggtta ttgatttaac gggtgttcat
      781 agattgagaa tttctcctct ctatctccgt tactgtttat ttcttactgt gtgtatttta
      841 ggttattaat agaaagaaga agtgtatgtg tgtgtatatc taatgattga tttttggcaa
      901 ttccagaaag gaattaattt tatgtattta gtcgtattaa tttgtataac cattagtggt
      961 ttatatagtt gtaggaaatt ttggttgtat gtgttcttat gttgtcttgg attctttttg
     1021 ctgctgtgat tgatgtatta tgcttctagg tattacgctt cggaatagtg accggatttt
     1081 aaagcctatc tctggaaaat atcccaaaca actacttcga gttcaactta tgtgactata
     1141 taagcaacct ggttaacaca cacgcgtttc gcgattatat aggttgtgta ctaaacgttg
     1201 gacccatcag cgataaatgt ttgagatagg ataaattgaa acagaataag gaaactcata
     1261 ttgtcatttt attggttttt tgtggaatcc tctgtcacgt gtaatgaaag ctaaaacgat
     1321 cattgttatg gctatcgcta tcgtacgaag aagggtcagt cactttcagt atctcatttc
     1381 aagaattcat aggttaatga ttaatgaaca tggagcaagt gttatatgtt tttgacggct
     1441 tacatttgaa tatcccacat gtcctaaaca acgttattct gtgcatatct aaacaaactg
     1501 ggtctaggag atttatcaat aatcacatca gatcttactt tttatgatga aagatatgca
     1561 gcaactcatc ttggacatca aattggggtt tttgcttttt tccaccttat tatcgattat
     1621 acataggtca tttttcaaac agattgtact tatgtactta tgagctttac tcacaataac
     1681 aacaacaaca acaacaatac ccaatcccac gaatgtaggg tacgggggag gtggagtgta
     1741 gacaatcatt ccccgtactc tagactagaa ggaaatccct actccacttg cgggtataga
     1801 atccgcgact agataagatc gtccctccct ctactcgaga gccaagagat tgcttcctaa
     1861 aggacctccg gccttactca tgcttatatt atcagtaata tctacaaatt tgttcccttt
     1921 tcttttattc gatttgtaag ataccattta gtactataat acaaagtgtt attagggatt
     1981 aattggtgct gttgatacat cggtgatgtt aggtttgcag cccaatatca aaaagataga
     2041 ataaattgat ctaattacac ttcttatgat tacatccatc aaggtacttt gattattaat
     2101 tatacccatc ttatttaaca tctctttcgt tttatgtttt tcatgtcaac ttatcgttag
     2161 tatttatgat tattatatat agttagtttt ggtgactgat aaaaggcgta ttcaggtaat
     2221 aaaaaatata tttcttcttt gtattcttct gggttgatgt attgtagcca tgttaatttt
     2281 aaagttaatt ttggtggctg ccaaaagctt tttagcgttt ggaccatgtt atttttacag
     2341 tttatcatac attatccata ttgctacagg taaacactat gtataagttt ggttgattat
     2401 tgtgggtcgt ttttacaatg atgtcaatat agtcataccc ttacatcatc taatatgtag
     2461 aaaataatta cttcccttat atcttacttt ataagagtaa catacatagt aacaaccaat
     2521 taatcataca actgtacacc cagtttacat gcgatggagt tgtttcctac gtggaaacgg
     2581 gaagagattg ttatcatcaa aaacatgtaa ctgagtgccg taacaaagtc atgaaagttg
     2641 acaatcaact gcaatgtata gacaaaggtg aaaaaacaac tgcacaacca cgtaataata
     2701 aatttataaa acaaacagcc tattaatgta gtaaacatca attttatgta cattagacca
     2761 ccccctatgg ttagttaccc gtccgttacc cgctcattac ccgtaatgaa ccataggcac
     2821 gagctagtta cccgctttag ttacccgctt tagttacccg cttccaccat ggatttaacg
     2881 gaagtatgaa ggttggttat agtaattgtg ggtcccaatg gctttttatt gtttggactt
     2941 gatgctttat tgcttgtaca ttgtatatta agaggagtat tttttttagc cattagacta
     3001 ctccctatag ttagttatcc gctagttacc cgctagttac ccgtcattac ccgtaactaa
     3061 ccataggcac catttagtta tccgcgttag ttacccgcat tctccatgga tttggcgaga
     3121 gtgttatatg catgtgggac cctcaatgct ttaaattgtt tatactttgt gctatatttt
     3181 ttgtacattg ttagtttttg gcaattatta tagggagtgt ttagttatag gattttatga
     3241 gttagttata ggatataagt gttgatgtgg cactgatgtg acagttaaga ggatgaatag
     3301 tgttagtcac gatagggagt ggccttatag ggaatgttta gttatggatt agttatagaa
     3361 tattggtgtt gatgtggcgc tgatgtggaa ggttaagagg atgaatagtt tagttacgat
     3421 agggagtggc cttatggttt agataattgg ttatgatttt tcattttcca tcacctgact
     3481 gcttgtggag aaaagatcag aagcctgttt ttcagtgtta catgtcagca tcattggttt
     3541 gtatatatat atcttatagt atcgtttttc acatcagctt ccagttgcaa caactcgaga
     3601 ggaaatcaag agagcctatt ataattgcat gaaatcctga caccaagtgg aaatgatctc
     3661 gatgctacca agttctgcat gtttatatca ttaacaacgt ttatgaggtg ggattatata
     3721 ataaaagggg ttgatctaag ccccttcttt tatgagtcat tttacatttt tagtcttatg
     3781 aaagcaactt ctttgtgagt atgaatttga ttaacctcat taatctaaat taatttattt
     3841 tcaacataat attgttcttg tgtaatattt ataggtttgg tatgaagatg atcgaagaag
     3901 gtttcactgg gattttaacg ttttatactt cattgatgtt tctataaggg taagctgatc
     3961 ttaattttac gtaatggtta caggtaacat atttagctgg ttgtgtttgg gtcaaaatta
     4021 taggtcgctc aggttgggct cacatgacaa tacttctttt ttcttcttgt tttacttgag
     4081 taaacaatta agtaatgcag tatcaaatat ggtcacacta actatgtgct tacaaattat
     4141 gaagaaccca tataatccgt cgagcaataa acaaaatcca gattttggat cgttgaatta
     4201 agcccgaaat tgaaattaaa atttatgctc ttttgggtac attatgtgat ttgggtaact
     4261 ggagaattat tatatataaa aatattttag tcgattcgat ttaagatgac aaaggataaa
     4321 gtttttgtac atatcaggta cgaattcatc ttttagtgtt gatttttaat tcaaaatttt
     4381 gtgcatgcgt tttacttgga tggtgaggtg atgatgaaca cgggaagact tgcattaagg
     4441 gaatgtagta gaagagttcc ctttattatg atgggtagaa tgccgtcaat taaccccgtt
     4501 ataccttatg ctgccacgtg tctcattact cacatttttt agcaataaca agatattttg
     4561 ccaatctgta taccctttgc gtattaggtt agagcttctg gtatgtgtct tggttttggt
     4621 tttgctgttt ggcttcaact ggaggtgctg gcaatttaaa atggactgtg gatgatgtaa
     4681 tttggtgatt ttgaagcccg aaaatgatct actgataatc aggatgttaa gttgacttta
     4741 ataggtcaat ttaaatgtaa gctggaaagt ctgattgata tcaagcagga ttatgggtgt
     4801 gtaagatggg tcaagattat cattgtacaa atggaatggg tcgagattgt tgctgaacta
     4861 caaagattgg ttaaatctgc aaatttgaac atgtagatca actttgtcaa aatattgtta
     4921 caatgggaac cgtgggtcaa atgttttaca ttggaatcat tttactggat ttatgtcatg
     4981 ctagaaaatc aagtttgagg atgatcagct attgagaaat gtttgttgtt gttgcgcaag
     5041 agagagtatt tgtgatgatg ttactgttat gttgacttat aattgtcaat ttggaaagtc
     5101 tacatgtaag ggttccgctt tggatcatga tgggaattac atcagtttca atggaattga
     5161 caaaaaaaag ctggataata aatataatga gctgaatttg acggagttat ggtaatcata
     5221 gtgactcaag taaagttatg agaatgaaga ctttgatgat acgatatttt tgttattatt
     5281 tgattgttct tagtaatgaa gt
//
LOCUS       XM_071886401             988 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904472), mRNA.
ACCESSION   XM_071886401
VERSION     XM_071886401.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..988
                     /gene="LOC139904472"
                     /note="uncharacterized LOC139904472; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904472"
     CDS             435..872
                     /gene="LOC139904472"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742502.1"
                     /db_xref="GeneID:139904472"
                     /translation="MAQANQTPTSDVEKRSYVFLHELEVGKESEVKVMICRSWDTHTP
                     YGKYLSTDFIASDEKGNAIQMTARSNVAHHFISRLKEGTVYLLNHFEVIPNREEYRIL
                     RDNKLMIQLNGSTFLRQESGADLNSFICHPTLAKDGERANHCK"
     misc_feature    525..779
                     /gene="LOC139904472"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(537..545,588..599,603..605,624..632,636..638,
                     681..683,705..713,756..764)
                     /gene="LOC139904472"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
ORIGIN      
        1 aagacttgga aaataaaaaa atatataaac attatttcct ataaaactca tgtgccttct
       61 gctgaccttc ccaacttctc caccgcttca catgctcact ttccttcatt catggtcctc
      121 aacaattaac cctaaaatct cagccaattg aatcgccatc cacccgatcc caaattcacc
      181 tcataaattc gtgctttaaa tcctttaaat tcggttccat ccaatgtcat aaacctcaat
      241 tgtaaccgta atttcacctg cataaccctg gaaaatagaa aggcacatta attttggaat
      301 caacatttca actcaatgca acagttgcac actccttcgt cttccttttc cggtcattca
      361 atcatgggta taaattgcaa tgcctgccac tattcttatg cattattaca tccaaacaat
      421 tttagtcaat tgcaatggct caagctaacc aaacacccac atctgatgtc gagaaaaggt
      481 catacgtttt tctgcatgag cttgaagttg gaaaggaatc cgaggtgaag gttatgattt
      541 gccgaagctg ggatactcat actccttacg ggaaatattt gagcacagac ttcatcgcct
      601 ctgatgaaaa gggtaacgcc attcagatga ctgccaggag taacgtcgcc catcatttca
      661 tctcgaggtt gaaggagggc actgtgtact tgctgaatca ctttgaggtc atcccaaaca
      721 gggaggagta ccgtattttg cgagacaaca agctcatgat ccagcttaat ggttcgactt
      781 tcctgagaca agagtctggg gctgatctaa attcatttat ctgtcatccc actcttgcta
      841 aggatggtga acgtgcaaat cattgcaagt aagctaatat gtacccacat atctatatct
      901 atatttttat ttacaatcta tttatatctt tgtgtcaatt taatatttta aagttgattt
      961 aatgaaattt aatatgacat gtcttatt
//
LOCUS       XM_071886402            3656 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor like protein kinase
            S.2-like (LOC139904473), transcript variant X1, mRNA.
ACCESSION   XM_071886402
VERSION     XM_071886402.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3656
                     /gene="LOC139904473"
                     /note="receptor like protein kinase S.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904473"
     CDS             977..3316
                     /gene="LOC139904473"
                     /codon_start=1
                     /product="receptor like protein kinase S.2-like"
                     /protein_id="XP_071742503.1"
                     /db_xref="GeneID:139904473"
                     /translation="MAEVVKQLEEALFLQWKHENPEIIKIGLDDVKLATEKFAEKYLI
                     GSGGYGKVYKAKLPIYDPLILEIQRMNQEEILKKRNLFAKFIFGGKNKKEIPKKATTN
                     KECRKKHHTLAIKHIVNDENGHGRQGFCLEIDMLRKCNHPNIVSLIGYCDEDSELILV
                     YEFVPNGSLDDYLESTKKETYLNWVHRIKMCLDIARGLDYLHTKVSDEERIIHRDIKS
                     ANILLGTNWEAKIADFGLSKFYRVNQLTSTIVTDRIAGTNVYLDPEYSKTGKLKKQSD
                     IYSFGVVLFEIFSGTLAYEKIYTDENDKGLAAVARRRFSEGTLMEIVDPEVMEETEER
                     CFGLKVGPNHESLETFAKIAIQCLAETQGERPKLTDITKELEIALSLQETRKDIHEFS
                     LEDMQLATENFSEKNFIKKEGLGMLYRGEVPNDIGCKIPVILKVTKSSEENNFLRELE
                     ILFGHKHENIIGIVGYCKEKGDKIIVYENAYNVNTLNSHVNDVSLTWTKRLEICLGIA
                     NGLKFLHKGFARQQSVVHRDIKSANIILNGDWSPKLCGFGFSLIIRKNQEMEYFVNDV
                     SGSLDYCDPVYCDPVYCDPVYWKTGFLTKESDIYSFGVVLFEMLCGTLACVKDFRESK
                     QFQEFLVEEIVLEGIKEQIEAKSLATFGRIAYQCLHEEPEKRPKANEIYMQLKKALDI
                     QVLNDRLAVKKDLYSLKLEEGGDLSDHIVTFNQLVSKLSTINEIIKEEDLALYMLLSL
                     PKSYKRFVDNMSTGITSLKLRDVLQKLVDKNYINEISYV"
     misc_feature    1106..2104
                     /gene="LOC139904473"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1106..1117,1124..1126,1130..1132,1172..1174,
                     1178..1180,1409..1411,1457..1468,1619..1621,1631..1636,
                     1640..1642,1670..1675)
                     /gene="LOC139904473"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2201..3010
                     /gene="LOC139904473"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2201..2212,2219..2221,2225..2227,2273..2275,
                     2279..2281,2357..2359,2405..2416,2558..2560,2570..2575,
                     2579..2581,2609..2614)
                     /gene="LOC139904473"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    <3038..3283
                     /gene="LOC139904473"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 acagtctctt caagtggcat gccaatttgt gtgtgtgtga gagagagaga gaaacaaaca
       61 aacagtgtac tttcctagaa ctatccctga ttttcattag ttcaatttct tcaaaaatca
      121 acatatactt ttttcacagt ttttccctaa attaaattaa agatctatca atatcaatac
      181 cgctatccgt tgacctagtc ggagaatccc cacgttgttt cgctggagat tggctctgcc
      241 gcttctgctg ctcgcttcac caccactcgt tctcatcagc aagaattgta tgattttgga
      301 gaaaggaaga tgagggtaat catgtgttaa aaggaatcag ctgaatgggg actagtatgg
      361 ttttggaggt aaccgaataa tccatccatg aagacatttc aataatttaa gtcgcaagta
      421 aacacgttca ctttctgacc gaataagctt tttgccagtc aactcagtcc gttaatacgt
      481 aagtaaacag gccctaacaa gtcaaaaata aaaataaaaa ataaaaaaaa atcctgcatt
      541 gcaacattgg tttggggata cgggatacct gtatcatcat catcgtcatc atgtcatctt
      601 tgttcaaaga agttgattac ttacgaatcc cgtatgctga tatcaaagct gctaccaata
      661 actttgacat cgtaaacatg ataggaattt accatagtaa aaatgtgaat tactatgtgt
      721 acgaaggaga actatttcgg tctggaaaaa gaatcaatat tattgtagaa aggattctag
      781 gtatccaaga agtacaactc ttggaagggc acgccgcaga tcagtcctgg cactacctgg
      841 aatttccaga gattcctgaa atcgagtata cacactttga tgataatata cgcaaacaaa
      901 tgaactcaaa agcaagacca ttttgttaga aacggttaat aaatgcttga ataatgaacg
      961 tgaagagcgc ccggacatgg ctgaggttgt gaaacaactt gaggaagctt tatttcttca
     1021 atggaaacat gaaaatccgg aaatcatcaa gattggactt gatgatgtaa agttagccac
     1081 agagaagttt gctgaaaaat accttattgg atctggtgga tatggtaagg tgtataaagc
     1141 aaaacttccc atttatgatc ctttaatttt ggaaatccaa aggatgaatc aagaggaaat
     1201 tcttaagaaa cgcaaccttt ttgcaaagtt cattttcgga gggaagaaca aaaaggaaat
     1261 tcctaagaag gcaactacta ataaggaatg tcgtaagaaa caccacactt tagcaataaa
     1321 acatatcgta aatgatgaaa atgggcatgg tagacaaggg ttctgtctag aaattgatat
     1381 gcttcgtaaa tgtaaccatc ccaacatagt gtcacttatc ggttattgtg atgaagattc
     1441 tgaattgatc cttgtatatg agtttgttcc aaatggttcc cttgatgatt atttggaaag
     1501 cacaaagaaa gaaacttatc ttaattgggt tcatcggatt aaaatgtgcc ttgatattgc
     1561 acgtgggtta gattatctac acacaaaggt gagtgatgaa gaaaggataa tacatcgtga
     1621 tattaaaagt gccaacatat tattaggaac gaattgggag gccaagattg ctgactttgg
     1681 gctctccaag ttctaccgtg tgaatcaatt gacgagcact atcgtgacag atagaattgc
     1741 tggcactaat gtctacttgg atcctgaata ttcaaaaacg ggtaaattaa aaaaacaatc
     1801 agacatatac tcattcggag ttgttttatt cgaaatattc tctggaacat tggcctatga
     1861 aaaaatttac accgatgaaa atgacaaggg acttgcagca gtagcacgga ggcgcttctc
     1921 cgagggaaca ctaatggaaa tagtagaccc agaggtaatg gaagaaactg aggaacgctg
     1981 ttttggtctg aaggtgggac ctaatcatga gtctctggaa acatttgcaa aaattgcaat
     2041 tcaatgttta gcagaaactc aaggggagcg accaaaactg acagacatca ccaaggaact
     2101 tgaaattgca ttaagccttc aagaaacgcg caaggacatt catgaatttt cacttgagga
     2161 catgcaattg gccaccgaaa actttagtga aaaaaatttc attaaaaagg aagggttggg
     2221 gatgttatat cgaggagaag ttccaaatga cattggatgt aaaattccag tcattttaaa
     2281 ggttaccaaa tcttcagaag aaaataattt tttaagagag cttgaaatcc tctttgggca
     2341 taaacacgaa aatattattg gcattgttgg ttattgcaag gaaaagggtg ataaaattat
     2401 cgtttatgaa aatgcatata acgtaaatac tctcaatagc catgtgaatg atgttagtct
     2461 tacatggaca aaaagacttg agatatgctt aggcattgca aacgggttaa aatttcttca
     2521 taaaggtttt gcaagacaac aatcggttgt acatagagat attaaaagcg ctaatatcat
     2581 actaaatgga gattggagtc caaaattatg tggttttggg ttttctttga taattcgtaa
     2641 aaatcaagag atggagtatt tcgttaatga tgtttcaggg tcactcgact attgtgatcc
     2701 cgtgtattgt gatcccgtgt attgtgatcc cgtctactgg aaaactgggt ttttaactaa
     2761 agaatctgat atttattcct ttggtgtggt tttatttgag atgttgtgtg gaacacttgc
     2821 atgtgtaaag gattttagag aatctaagca atttcaagaa tttttagtcg aagagattgt
     2881 tttagagggt attaaggagc aaattgaagc caaatcgcta gctacatttg gaaggattgc
     2941 ctatcaatgc ttgcatgaag agccagaaaa acgaccaaaa gcgaatgaaa tatatatgca
     3001 actcaagaaa gcattagata tccaagtgtt gaacgataga ttggctgtca aaaaagattt
     3061 gtattcgttg aaactcgaag aaggaggtga tctgagtgac catattgtca cctttaatca
     3121 attagtttcg aagttgtcca ccataaatga gattataaaa gaagaggact tggcactata
     3181 tatgttgtta tcattaccaa aatcgtacaa acgattcgtg gacaatatgt caactggaat
     3241 caccagcttg aaacttcgag acgtacttca gaagttggtt gacaagaact atataaacga
     3301 gatctcttat gtgtgaagca tccattagct acataggttg tcagaattgt ttcaacttta
     3361 aatcatggta cgaacataaa agtccctaaa gacagcttga ttacgttaag tggttgttat
     3421 ttaagttaaa tttgctgcaa attttttttt tattttattt ttgcacaatt tcaactatgt
     3481 agatgagtaa ttgtagtcaa accatatacc tcaacaaggg aaatatgaat actaattaaa
     3541 tacaaagcag gtaagtactt agtggcatta cacatacacg ccagcatatg tggttagtgg
     3601 ttacattgta gacctattat aatgccgatg taatcatcat ttttcagctt cctata
//
LOCUS       XM_071886403            3215 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor like protein kinase
            S.2-like (LOC139904473), transcript variant X2, mRNA.
ACCESSION   XM_071886403
VERSION     XM_071886403.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3215
                     /gene="LOC139904473"
                     /note="receptor like protein kinase S.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904473"
     CDS             536..2875
                     /gene="LOC139904473"
                     /codon_start=1
                     /product="receptor like protein kinase S.2-like"
                     /protein_id="XP_071742504.1"
                     /db_xref="GeneID:139904473"
                     /translation="MAEVVKQLEEALFLQWKHENPEIIKIGLDDVKLATEKFAEKYLI
                     GSGGYGKVYKAKLPIYDPLILEIQRMNQEEILKKRNLFAKFIFGGKNKKEIPKKATTN
                     KECRKKHHTLAIKHIVNDENGHGRQGFCLEIDMLRKCNHPNIVSLIGYCDEDSELILV
                     YEFVPNGSLDDYLESTKKETYLNWVHRIKMCLDIARGLDYLHTKVSDEERIIHRDIKS
                     ANILLGTNWEAKIADFGLSKFYRVNQLTSTIVTDRIAGTNVYLDPEYSKTGKLKKQSD
                     IYSFGVVLFEIFSGTLAYEKIYTDENDKGLAAVARRRFSEGTLMEIVDPEVMEETEER
                     CFGLKVGPNHESLETFAKIAIQCLAETQGERPKLTDITKELEIALSLQETRKDIHEFS
                     LEDMQLATENFSEKNFIKKEGLGMLYRGEVPNDIGCKIPVILKVTKSSEENNFLRELE
                     ILFGHKHENIIGIVGYCKEKGDKIIVYENAYNVNTLNSHVNDVSLTWTKRLEICLGIA
                     NGLKFLHKGFARQQSVVHRDIKSANIILNGDWSPKLCGFGFSLIIRKNQEMEYFVNDV
                     SGSLDYCDPVYCDPVYCDPVYWKTGFLTKESDIYSFGVVLFEMLCGTLACVKDFRESK
                     QFQEFLVEEIVLEGIKEQIEAKSLATFGRIAYQCLHEEPEKRPKANEIYMQLKKALDI
                     QVLNDRLAVKKDLYSLKLEEGGDLSDHIVTFNQLVSKLSTINEIIKEEDLALYMLLSL
                     PKSYKRFVDNMSTGITSLKLRDVLQKLVDKNYINEISYV"
     misc_feature    665..1663
                     /gene="LOC139904473"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(665..676,683..685,689..691,731..733,737..739,
                     968..970,1016..1027,1178..1180,1190..1195,1199..1201,
                     1229..1234)
                     /gene="LOC139904473"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1760..2569
                     /gene="LOC139904473"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1760..1771,1778..1780,1784..1786,1832..1834,
                     1838..1840,1916..1918,1964..1975,2117..2119,2129..2134,
                     2138..2140,2168..2173)
                     /gene="LOC139904473"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    <2597..2842
                     /gene="LOC139904473"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 acagtctctt caagtggcat gccaatttgt gtgtgtgtga gagagagaga gaaacaaaca
       61 aacagtgtac tttcctagaa ctatccctga ttttcattag ttcaatttct tcaaaaatca
      121 acatatactt ttttcacagt ttttccctaa attaaattaa agatctatca atatcaatac
      181 cgctatccgt tgacctagtc ggagaatccc cacgttgttt cgctggagat tggctctgcc
      241 gcttctgctg ctcgcttcac caccactcgt tctcatcagc aagaattgta tgattttgga
      301 gaaaggaaga tgagggtaat catgtgttaa aaggaatcag ctgaatgggg actagtatgg
      361 ttttggagca cgccgcagat cagtcctggc actacctgga atttccagag attcctgaaa
      421 tcgagtatac acactttgat gataatatac gcaaacaaat gaactcaaaa gcaagaccat
      481 tttgttagaa acggttaata aatgcttgaa taatgaacgt gaagagcgcc cggacatggc
      541 tgaggttgtg aaacaacttg aggaagcttt atttcttcaa tggaaacatg aaaatccgga
      601 aatcatcaag attggacttg atgatgtaaa gttagccaca gagaagtttg ctgaaaaata
      661 ccttattgga tctggtggat atggtaaggt gtataaagca aaacttccca tttatgatcc
      721 tttaattttg gaaatccaaa ggatgaatca agaggaaatt cttaagaaac gcaacctttt
      781 tgcaaagttc attttcggag ggaagaacaa aaaggaaatt cctaagaagg caactactaa
      841 taaggaatgt cgtaagaaac accacacttt agcaataaaa catatcgtaa atgatgaaaa
      901 tgggcatggt agacaagggt tctgtctaga aattgatatg cttcgtaaat gtaaccatcc
      961 caacatagtg tcacttatcg gttattgtga tgaagattct gaattgatcc ttgtatatga
     1021 gtttgttcca aatggttccc ttgatgatta tttggaaagc acaaagaaag aaacttatct
     1081 taattgggtt catcggatta aaatgtgcct tgatattgca cgtgggttag attatctaca
     1141 cacaaaggtg agtgatgaag aaaggataat acatcgtgat attaaaagtg ccaacatatt
     1201 attaggaacg aattgggagg ccaagattgc tgactttggg ctctccaagt tctaccgtgt
     1261 gaatcaattg acgagcacta tcgtgacaga tagaattgct ggcactaatg tctacttgga
     1321 tcctgaatat tcaaaaacgg gtaaattaaa aaaacaatca gacatatact cattcggagt
     1381 tgttttattc gaaatattct ctggaacatt ggcctatgaa aaaatttaca ccgatgaaaa
     1441 tgacaaggga cttgcagcag tagcacggag gcgcttctcc gagggaacac taatggaaat
     1501 agtagaccca gaggtaatgg aagaaactga ggaacgctgt tttggtctga aggtgggacc
     1561 taatcatgag tctctggaaa catttgcaaa aattgcaatt caatgtttag cagaaactca
     1621 aggggagcga ccaaaactga cagacatcac caaggaactt gaaattgcat taagccttca
     1681 agaaacgcgc aaggacattc atgaattttc acttgaggac atgcaattgg ccaccgaaaa
     1741 ctttagtgaa aaaaatttca ttaaaaagga agggttgggg atgttatatc gaggagaagt
     1801 tccaaatgac attggatgta aaattccagt cattttaaag gttaccaaat cttcagaaga
     1861 aaataatttt ttaagagagc ttgaaatcct ctttgggcat aaacacgaaa atattattgg
     1921 cattgttggt tattgcaagg aaaagggtga taaaattatc gtttatgaaa atgcatataa
     1981 cgtaaatact ctcaatagcc atgtgaatga tgttagtctt acatggacaa aaagacttga
     2041 gatatgctta ggcattgcaa acgggttaaa atttcttcat aaaggttttg caagacaaca
     2101 atcggttgta catagagata ttaaaagcgc taatatcata ctaaatggag attggagtcc
     2161 aaaattatgt ggttttgggt tttctttgat aattcgtaaa aatcaagaga tggagtattt
     2221 cgttaatgat gtttcagggt cactcgacta ttgtgatccc gtgtattgtg atcccgtgta
     2281 ttgtgatccc gtctactgga aaactgggtt tttaactaaa gaatctgata tttattcctt
     2341 tggtgtggtt ttatttgaga tgttgtgtgg aacacttgca tgtgtaaagg attttagaga
     2401 atctaagcaa tttcaagaat ttttagtcga agagattgtt ttagagggta ttaaggagca
     2461 aattgaagcc aaatcgctag ctacatttgg aaggattgcc tatcaatgct tgcatgaaga
     2521 gccagaaaaa cgaccaaaag cgaatgaaat atatatgcaa ctcaagaaag cattagatat
     2581 ccaagtgttg aacgatagat tggctgtcaa aaaagatttg tattcgttga aactcgaaga
     2641 aggaggtgat ctgagtgacc atattgtcac ctttaatcaa ttagtttcga agttgtccac
     2701 cataaatgag attataaaag aagaggactt ggcactatat atgttgttat cattaccaaa
     2761 atcgtacaaa cgattcgtgg acaatatgtc aactggaatc accagcttga aacttcgaga
     2821 cgtacttcag aagttggttg acaagaacta tataaacgag atctcttatg tgtgaagcat
     2881 ccattagcta cataggttgt cagaattgtt tcaactttaa atcatggtac gaacataaaa
     2941 gtccctaaag acagcttgat tacgttaagt ggttgttatt taagttaaat ttgctgcaaa
     3001 tttttttttt attttatttt tgcacaattt caactatgta gatgagtaat tgtagtcaaa
     3061 ccatatacct caacaaggga aatatgaata ctaattaaat acaaagcagg taagtactta
     3121 gtggcattac acatacacgc cagcatatgt ggttagtggt tacattgtag acctattata
     3181 atgccgatgt aatcatcatt tttcagcttc ctata
//
LOCUS       XM_071886404            1710 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides magnesium transporter
            MRS2-1-like (LOC139904474), mRNA.
ACCESSION   XM_071886404
VERSION     XM_071886404.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1710
                     /gene="LOC139904474"
                     /note="magnesium transporter MRS2-1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139904474"
     CDS             305..1621
                     /gene="LOC139904474"
                     /codon_start=1
                     /product="magnesium transporter MRS2-1-like"
                     /protein_id="XP_071742505.1"
                     /db_xref="GeneID:139904474"
                     /translation="MADLKERMLPPKPASAMNLRDASYRPSASGRQPYQGVDVLGLKK
                     RGQGLRSWIRVDAATGDSQVIEVDKFTIMRRCDLPARDLRLLDPLFVYPSTILGREKA
                     IVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLRAAEGHELNRRIGNRDFGDM
                     FGNTSPDYLPFEFRALEVALEAACTFLDTQAAELEIEAYPLLDELTSKISTLNLERVR
                     RLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMDSLFDGAEQSVIGYRS
                     NDGQQSISAPVSPVSSPPESRRLDKTLSIARSRHDSMRSSESGTENIEELEMLLEAYF
                     VVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELILTTATFVVAIFGVVAGI
                     FGMNFMIPLFDSPSAFTWVLVITGVTGAIIFSSFLWFFRYKRLMPL"
     misc_feature    458..1609
                     /gene="LOC139904474"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     Region: Mrs2_Mfm1p-like; cd12823"
                     /db_xref="CDD:213357"
     misc_feature    order(494..496,584..586,620..622,626..631,671..682,
                     686..688,851..853,860..862,1007..1012,1019..1021,
                     1304..1306)
                     /gene="LOC139904474"
                     /note="Cl binding site [ion binding]; other site"
                     /db_xref="CDD:213357"
     misc_feature    order(545..547,554..559,587..589,593..595,695..697,
                     707..709,824..826,833..835,845..847,857..859,866..871,
                     878..880,887..892,896..901,908..910,944..949,953..958,
                     965..970,977..982,986..991,1001..1003,1007..1012,
                     1019..1024,1031..1036,1286..1291,1295..1300,1307..1312,
                     1316..1321,1328..1333,1337..1342,1346..1354,1361..1384,
                     1388..1426,1430..1438,1442..1459,1463..1474,1484..1495,
                     1526..1531,1538..1543,1589..1591,1598..1600)
                     /gene="LOC139904474"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:213357"
ORIGIN      
        1 ttgagttacc atacaaatac gacatcgttt aacgaactcc accacacgca atcataaaat
       61 ccggtaggca atcatcagag tttggttatg tttgcttcca gattaattgc agatttcatt
      121 cttttcatca tcatcatcat catcatcatc attacataca ccaacacctc tgtatctgta
      181 ggtcttttaa taagcggcaa caaacttctc tgatacttct gtacatctca ttcattattt
      241 catcataaat tcacattcaa ttcattacga tacaaatcaa ttcatgcatc tttagacctc
      301 tataatggca gacttaaaag aacgaatgct gccaccaaaa cctgcatcag ctatgaacct
      361 tcgagatgca tcttataggc catctgcatc tggtcgtcag ccctatcaag gggttgatgt
      421 tttaggtctc aaaaagcgtg gccaaggtct tcgttcatgg attcgtgttg atgctgctac
      481 tggggattca caagttattg aggttgacaa gttcactata atgcgtcggt gcgatcttcc
      541 tgctcgagat cttcgtctac ttgatccatt atttgtctat ccatcaacaa ttctgggtag
      601 agagaaggct atagttgtaa atttggagca gattcgttgt attataacag ctgatgaagt
      661 tctgcttttg aattctcttg atagttatgt gttgcaatac gtggtggaat tgcaaagacg
      721 tttgagagct gcagaaggcc atgaattgaa cagacgtatt ggaaataggg actttggtga
      781 catgtttgga aacacgtccc ctgattactt gccctttgag ttcagggctc ttgaagttgc
      841 tttagaggct gcttgtacat ttttagatac acaggcagct gaactagaaa ttgaagctta
      901 tccgttgcta gatgaactta cttcaaagat cagcactctg aacttggaac gtgttcgtag
      961 actgaaaagc agacttgttg cattgactcg aagggttcag aaggtaagag atgaaataga
     1021 gcaattaatg gatgatgatg gagatatggc ggaaatgtac cttactgaga agaaaaggcg
     1081 aatggattcg ttattcgatg gagcagaaca atctgtgatt ggatacaggt caaacgatgg
     1141 tcaacaatcc atatctgctc ccgtttctcc agtttcttct ccacctgaaa gtcgaaggct
     1201 tgataaaact ttgagcattg caagaagtag gcacgatagc atgaggagtt cagaaagtgg
     1261 tacagaaaac attgaagaac ttgagatgct gttggaggct tattttgtgg tcattgatag
     1321 tactcttaat aagttgacat cgctgaagga atacattgat gacactgaag acttcatcaa
     1381 catccagctg gataacgtcc gcaatcagct tatacaattt gagttgatac tgactacggc
     1441 aacatttgtt gtggccatct ttggagtggt agcaggcata tttggcatga attttatgat
     1501 accattgttt gatagcccgt cagcatttac atgggtcttg gtgataacgg gagttactgg
     1561 agccattatt tttagttcgt ttttatggtt tttcagatat aaaagactca tgccattgta
     1621 aaagaagatc aatgggatta taaacgaaaa actttccatt gtaactgtta tcacaaacga
     1681 aatctttaaa aattattcaa gttcgaccga
//
LOCUS       XR_011778834             628 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904475), ncRNA.
ACCESSION   XR_011778834
VERSION     XR_011778834.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..628
                     /gene="LOC139904475"
                     /note="uncharacterized LOC139904475; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904475"
     ncRNA           1..628
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904475"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904475"
ORIGIN      
        1 cccaaatcat aaaccctagt tttcaaaatc caagtcgttt acaattgttg attctccaaa
       61 attgatttaa taaaatggtt gaatgttggt gtcgtagatg ttcttcacac atataggttt
      121 gtaaaatggt atggtccact tgtgatggat agagaaacat tattggagac aaatatcttg
      181 cttgaattga agctcaagaa ttaatatgtt gttgcttcat caaggttcaa catgcccata
      241 tcttcgttcg atggatcaaa taatgtgcac ttgtttgact gagatcatac ccggattttt
      301 gcgagctaag aacaagcttt aggcatatgt taaagttaaa gaagctgaaa atagaagaca
      361 tcagattagt ttgtggattt ctttgtttgt aatagtattg tttattgtaa ttttcttccc
      421 ctagatttaa atgtgttaga aatcaagttg cacaacagtt tatgttacaa attggaatgc
      481 aacagttgta ttttgtttaa gttctgttgt agttcatgat tagaaaacgt tgatgttata
      541 tagttcatgt tttctaacat atagtactgc catatactgg atatgggtca aagtaacccc
      601 tggttgtttg tataaaactg cacaccaa
//
LOCUS       XR_011778835             869 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904476), ncRNA.
ACCESSION   XR_011778835
VERSION     XR_011778835.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..869
                     /gene="LOC139904476"
                     /note="uncharacterized LOC139904476; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904476"
     ncRNA           1..869
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904476"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904476"
ORIGIN      
        1 taccatgaat caattattta tcggaataat acatgagact ttcaagtttc aagtgatttt
       61 gctccgagct gtcactttgt tggatcacgg aggggtgttt tccttggaat taaaatttga
      121 caagagataa cgaacatcga aatgctgaag aatgggtagc aaatgggtcg ggactttcca
      181 atcagcaatc aaatggagag gggtcttcca agtagagatc agttttgggg ataaagaagc
      241 atacatctta ctcactactc aatgtatcca cgtcatcaga ttagtaaacg tcgatgtacg
      301 agatgatatg ttaaattcta tttgttgggc agataagaga cacgatcgag cgtgtatgag
      361 ctgctttaaa agtgtatatg attacactcc tttgtcggat gatggttatt gggtttaaat
      421 ttacatctat caagtggaga tccacttgaa attcaaggaa ggaaattaaa tgcttcatgg
      481 tctgatggat ggctacatgt cttccaactt ttgctctata gcaagggtgg taaaatgaac
      541 aggaaaagtg ttattctttc acatacgaat accataggtt ttgagaattg acgaggaata
      601 ataaatggta tttgacaaac aaaggagaga gtctgcccat cttgcagttc catctactct
      661 tttatcagat aaaacgaagt gcttttcacc gagccagcaa ttactaaaaa ctttgaacat
      721 ttgtacaaca cgactactct cttccaagag agaggaaagg aagatagttc tcacccgcat
      781 cttaagtata ggcttttaat aagtactatt ttactagata gtaattgcaa tcgatagaaa
      841 gtttgttgta cagttttggt aacatgaaa
//
LOCUS       XR_011778836             590 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904479), ncRNA.
ACCESSION   XR_011778836
VERSION     XR_011778836.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..590
                     /gene="LOC139904479"
                     /note="uncharacterized LOC139904479; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904479"
     ncRNA           1..590
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904479"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904479"
ORIGIN      
        1 gcaaagaggc caaagatttg actaggtcaa ctagtcaaac cttcaacctc ctcctctcat
       61 tttctctctt tctctctttt catacttcca ttttcctctc aagaactcaa ccaagattca
      121 tcatctaatt tcggatttgg aggctaacat caaaacaaat tacatatttg gaatcctctc
      181 ttcatcctct tcgacttgat accaatttca tctcatttgg gtcaagacta gcattgttct
      241 ttgcacacgt ttacttgttg aagtacttta ctactcgtgc actcaaggtc tttgaacgct
      301 atgtgaaaca tgcttccgct cattattttg atacttgcat tggatgtcga gtatacatgc
      361 atttcatgga gcgtcttttg actttcttta aaactgtgtc gcataggttt cacatgtaac
      421 tataactttg taacgtaact tttggatgaa caattcttgt aaactttgaa acaatcttta
      481 tttttgaaag gaatgcgaca tatctttggt caaatgtcac gttaaagacc tatgaccacg
      541 caacgggacc taagtagtcg acgccgtcaa ttgacgattt gtcggggtcg
//
LOCUS       XM_071886405            1107 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable glucan
            endo-1,3-beta-glucosidase A6 (LOC139904480), mRNA.
ACCESSION   XM_071886405
VERSION     XM_071886405.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1107
                     /gene="LOC139904480"
                     /note="probable glucan endo-1,3-beta-glucosidase A6;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139904480"
     CDS             1..1107
                     /gene="LOC139904480"
                     /codon_start=1
                     /product="probable glucan endo-1,3-beta-glucosidase A6"
                     /protein_id="XP_071742506.1"
                     /db_xref="GeneID:139904480"
                     /translation="MKNQKATKMPLVFLSLFCFIASSRAVFSNRVGISYGRLGNNLPT
                     PARAVELLQTMNAGRVKLYDADHEVLNLLSGKPIDVAITVANDEISGIAANQHLADQW
                     VYEHILAHYPNTRIRYVLVGNEVLSTISTTQDLQIARDLVPAMRRIKNTIKTQGIKNI
                     KVTTPLAMDMMETMFPPSNGSFKPEIRDLMLPLLKYINGTKSYIFLDVYPYLVWSESQ
                     RDNHTAINLDFALLKTGNQTYTDPNSGYVYNDLLDQMLDSVVYAMAKLGYSDVLIAIA
                     ETGWPHEGDSNEVGANRENAAEYNNNLIRKMSVVPAAGTPARPGEVIPTFIFSMFDEN
                     QKYGPATERHWGLLNPDGSPVYQVNITGKGVPSD"
     misc_feature    91..1077
                     /gene="LOC139904480"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     Region: Glycosyl hydrolases; cl23725"
                     /db_xref="CDD:474034"
ORIGIN      
        1 atgaagaacc aaaaagccac caaaatgcct cttgtttttc tatcattgtt ctgtttcatt
       61 gcttcctcaa gagccgtgtt ctcgaatagg gtgggtataa gctacgggcg gttaggaaac
      121 aatctaccaa ctccagctcg agccgttgag cttcttcaaa ccatgaacgc gggtcgggtc
      181 aaactctacg atgctgacca tgaagtgctc aatctcctat cgggaaaacc aatcgacgta
      241 gcaatcacag ttgcaaacga tgaaatatca ggaatcgctg caaatcaaca tctagcggac
      301 caatgggtat acgaacatat tctagctcat tatcccaaca ctagaattcg ttacgttctt
      361 gtaggaaatg aagtcttaag cacaattagt acgacacaag atttgcaaat agcgcgtgat
      421 cttgtacccg ctatgagaag aataaagaac actataaaaa cacaagggat taaaaacatc
      481 aaagtcacaa ctcctctagc aatggacatg atggaaacca tgtttccacc ttcgaacggg
      541 agttttaagc ccgagatacg tgacttaatg ctacctttat taaagtacat aaacggaaca
      601 aaatcataca tttttttaga tgtttatcct tacttagtgt ggtccgaaag tcaaagagat
      661 aatcatactg ctataaacct tgatttcgct ttacttaaaa ctgggaacca aacgtacacg
      721 gatccaaaca gtggatatgt atacaatgat cttttggatc agatgcttga ttctgttgtg
      781 tacgcaatgg ctaagttagg atacagcgac gtgttaattg ctattgcaga aacgggctgg
      841 ccacacgagg gtgactcgaa tgaagttggt gcaaacagag aaaatgcagc tgaatataat
      901 aacaatctta taagaaaaat gtctgttgtt ccagctgcag gaacaccagc ccggcccggt
      961 gaagttattc caacttttat attttcgatg tttgatgaaa atcaaaaata cgggccggct
     1021 actgaaagac actgggggct attaaatcct gatgggagcc ctgtttatca ggtgaacata
     1081 actgggaaag gtgtgccatc tgattag
//
LOCUS       XM_071886406            1288 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 60 (LOC139904481), mRNA.
ACCESSION   XM_071886406
VERSION     XM_071886406.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1288
                     /gene="LOC139904481"
                     /note="probable protein phosphatase 2C 60; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139904481"
     CDS             15..1106
                     /gene="LOC139904481"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 60"
                     /protein_id="XP_071742507.1"
                     /db_xref="GeneID:139904481"
                     /translation="MGVYLSTPKTDKLSQDGENENLRYGVSSMQGWRTSMEDAHAAYL
                     DLDRSTSFFGVYDGHGGQDVSKFCAKYLHQQVIKHEAYSNGDIGTALQKSFLRMDEMM
                     CGQRGWRELSMLGDKGDQFSGMMQGLIWSPKSGEVNGQNDEWSVEEGPHSNYKGPTSG
                     STACVAVIRNNQLVVANSGDSRCVLSRKGQAYNLSKDHKPDLEIEKERILKAGGFIHC
                     GRVNGTLNLTRAIGDMELKKDKSLPPEKQILTANPDIHTVELCEEDDFLVLACDGIWD
                     CMSNQQLVDFVLDQLKIESKLSAVCEKVFDRCLAPSSGGEGCDNMTMILVQFKNCPKS
                     TAGPSISEQPSHDQSPESPDNKHKSESHQ"
     misc_feature    81..998
                     /gene="LOC139904481"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; Region: PP2Cc; cd00143"
                     /db_xref="CDD:238083"
     misc_feature    order(111..113,123..128,183..191,828..830,969..971)
                     /gene="LOC139904481"
                     /note="active site"
                     /db_xref="CDD:238083"
ORIGIN      
        1 gttgataact tgatatggga gtatatctaa gcacgcctaa aaccgataag ctttctcagg
       61 atggtgagaa tgagaaccta agatatgggg tatcatccat gcaggggtgg cgtacatcaa
      121 tggaagatgc tcatgctgct tatcttgatt tggaccgttc aacatctttc tttggtgttt
      181 atgatggcca tggaggccag gacgtctcta aattttgtgc taagtatctt caccagcaag
      241 tgatcaaaca tgaagcttat tctaatggtg atattggcac tgctctccag aaatcttttc
      301 tcagaatgga tgaaatgatg tgcggacaac gtggctggag agagttatcc atgttgggag
      361 ataaaggaga tcagtttagt ggcatgatgc aaggattaat ttggtcccct aaaagtggtg
      421 aagtaaacgg tcaaaatgat gaatggtctg ttgaggaggg gccacattct aattacaaag
      481 gaccgacaag tggtagcaca gcttgcgtgg cagtcatccg taataaccag cttgtagtag
      541 ccaattctgg tgattctcgt tgtgtgttat ctcgcaaggg tcaggcatac aatttgtcga
      601 aagaccacaa gcctgatctt gagattgaga aagagcggat attgaaagct ggtggtttta
      661 ttcattgtgg tcgagttaac gggactctaa acttgactag ggctattggg gatatggaac
      721 tgaagaagga taaatcactg ccccctgaaa agcaaattct gacagccaat cctgatatac
      781 acacggttga gctttgtgag gaggatgatt ttcttgttct tgcttgtgat ggtatatggg
      841 attgcatgtc taaccaacag ctggtggact ttgtgctaga ccaattaaaa attgaaagta
      901 agctctcagc ggtgtgcgag aaggtatttg acaggtgttt ggcaccgtcc tctggtggtg
      961 aaggttgtga caacatgaca atgattttgg ttcagttcaa aaattgcccc aaatctactg
     1021 ctggtccttc tatttcagaa caaccttctc atgatcaatc acccgaatca cctgacaaca
     1081 aacacaaatc agaatcacat cagtgatact agttttttca caaaacgtcg agagttttat
     1141 atcgatggct attagagaaa cttgtgtgca tatatgctat cattaggtac ctttgtttgg
     1201 ttgaattaca atacagattg ctgacaagat ataggcaggt acgtgcaagc aatcaataac
     1261 agaatctaat acagaacatt acattcat
//
LOCUS       XM_071886407             663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein DMP9-like
            (LOC139904482), mRNA.
ACCESSION   XM_071886407
VERSION     XM_071886407.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..663
                     /gene="LOC139904482"
                     /note="protein DMP9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139904482"
     CDS             1..663
                     /gene="LOC139904482"
                     /codon_start=1
                     /product="protein DMP9-like"
                     /protein_id="XP_071742508.1"
                     /db_xref="GeneID:139904482"
                     /translation="MQPSDESGIRIYTPSPPPIPNPPLPPPQTTIPPPPVGGPKRFQR
                     TLSKGVQKTLSKTSMLVNFLPTGTLLTFEMVLPSIYGKGQCSTVATLMINLLLSICTF
                     SCFFFHFTDSFRGPDGKVYYGFVTPSGLKVFKPTLNIEVPKDDRYKVGLSDFIHAMMS
                     TMVFMAIAFSDHRVTNCLFPGHAAEMDEVMQSFPLMVGIVCSGLFLVFPNTRYGIGCL
                     SA"
     misc_feature    163..651
                     /gene="LOC139904482"
                     /note="Protein of unknown function (DUF679); Region:
                     DUF679; pfam05078"
                     /db_xref="CDD:461544"
ORIGIN      
        1 atgcaaccat cagatgaatc aggcatcaga atctacaccc catctccacc acccatccct
       61 aatccaccgt taccaccacc acaaaccacc atacctccac cacccgttgg cggcccgaaa
      121 cgattccaaa gaacgctctc aaaaggggtc caaaaaacac tctcgaaaac gtcaatgctc
      181 gttaacttcc tcccaaccgg aactctcctc actttcgaaa tggtcctccc ttcgatctac
      241 ggaaaaggcc aatgttccac tgtggccacc ctcatgataa acctcctgct ctccatttgc
      301 actttttcgt gcttcttctt tcacttcacc gacagttttc gtgggcccga cgggaaggtt
      361 tactacgggt ttgtcacacc atcgggttta aaagtgttta aaccgacttt aaacattgaa
      421 gttcctaaag acgataggta taaagttggg ttaagtgatt tcatacacgc gatgatgtca
      481 acaatggtat tcatggctat cgctttctcg gatcatcggg ttacaaattg tttgtttccg
      541 ggtcatgctg cagagatgga tgaagtgatg cagagttttc cattgatggt tggaatcgtt
      601 tgtagcggtt tgtttcttgt ttttccgaat actcgttacg gtattggatg tttatcagcc
      661 tga
//
LOCUS       XR_011778837             612 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904483), ncRNA.
ACCESSION   XR_011778837
VERSION     XR_011778837.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..612
                     /gene="LOC139904483"
                     /note="uncharacterized LOC139904483; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904483"
     ncRNA           1..612
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904483"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904483"
ORIGIN      
        1 aaacacggtt gaggggtcac tctcatccct ttcattcacg ttattcattc gaaccctaaa
       61 ttaatcccta actgagccct aaattgatca cgttattcat tcgaacccta aaacaggttc
      121 aacaatcgat taacaatcgt taaattccag atcaagatac attatactca tctgattcgt
      181 ccttccaaca attgattaac aaggacagtt ggatgacggt acattgaatg acttttatgt
      241 caaggtttgc ttaaggttca aagtaccggt taagattgtc aacgatacat gatcaacctc
      301 ctttacaatg ttcgaagatg accttaaaag ttcttcaata aacgacttat gagttgaaga
      361 agtctgttgt agacgatgat gagataccct ctgaacatca acagattgtt ggcaacaaac
      421 tattgttcaa cggtaatgtc gctgtcatta ataggttaaa tgcatatttt gtgaacatga
      481 taaaggtata ccgtgacgat gatgaataca tctccgtatt caacgagatg ttgaagtctt
      541 gatgattttg agtgcaggaa gatgggtcgg taggtaacaa tggtactaat gttgcacctg
      601 cattacatga gg
//
LOCUS       XR_011778838             329 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904484), ncRNA.
ACCESSION   XR_011778838
VERSION     XR_011778838.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..329
                     /gene="LOC139904484"
                     /note="uncharacterized LOC139904484; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904484"
     ncRNA           1..329
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904484"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904484"
ORIGIN      
        1 actacactat atcttttttc tctcttcttt ctggccgtgg gtttaatgtt cactatcgac
       61 atcttcatca tcccttctcc atcaatcctc catcaaaaca ctaaattgat tatagattct
      121 tgctagtctc gatttcctct atgcatccat ccgatcaatt ttgcttttca gggttcttag
      181 gggatgttgc ttctgatgtt gattagaggt cgcatacttg catggccgga gttcagctgt
      241 tattttaaac atgtactatt cacatttgaa cctataacac tttattttaa taagcgtatt
      301 tagttgaatt ttgagtcact tactactta
//
LOCUS       XM_071886408            2794 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MICRORCHIDIA 7-like
            (LOC139904485), mRNA.
ACCESSION   XM_071886408
VERSION     XM_071886408.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2794
                     /gene="LOC139904485"
                     /note="protein MICRORCHIDIA 7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139904485"
     CDS             136..2520
                     /gene="LOC139904485"
                     /codon_start=1
                     /product="protein MICRORCHIDIA 7-like"
                     /protein_id="XP_071742509.1"
                     /db_xref="GeneID:139904485"
                     /translation="MAEIKVKEEYVEVNSTTTSKYKNASEIPVIDLEDSASDSDSGDD
                     VSSSGDGNRNGKRSRVPNEVNNDSNKRNKRGNGVVLPEGFLDPLPNNDLTPRNAKSSR
                     VCKQFWKADDFDGLASGNQWNTSAGGMDHLRVHPRFLHSNATSHKWVLGAFAELLDNS
                     LDEVGNGATYVKVDMLENKKTEDRMLLIEDNGGGMDPDKMRHCMSLGYSLKSKVKDTI
                     GQYGNGFKTSTMRLGADVVVFSRCSGKYGKRSTQSIGLLSYTFLRSTGKEDIVVPMLD
                     YEKSAQEWKKMARVSANDWNTNLEALVQWSPFSSETELLRQFDHMKDQGTRIIIYNLW
                     EDDQGQLELDFDTDKHDIQIRGVNRDEKNIEMAQKYPNSRHFLTYRHSLRSYASILYL
                     RVPYNFRMILRGKDVEHHNIINDMMLTTEVTYKPQPNLEGLLPDSNMSATVTVGFVKD
                     ARSHIDVQGFNVYHKNRLIKPFWRLWNAAGSDGRGVIGVLEANFVEPAHDKQGFERTN
                     VLQRLETKLIQTQKKYWSENCDKIGYAPRRNKIVDDRDTFDEHIRETPSRRNNVTSER
                     KIPTPQSDKIPSRKHQNGVGASSSESTSHLNENDVDDDLQTLMTTRRAANGNSSQKEP
                     FTLKTRSMSAVEVRNQGPEPSVAPNAKDMQVVTPSYFKSSGVNGNVNGSSSSNNKSLE
                     ALTEENRELKERLKKREEEILGDLQHDLDSEKNRCKELELQLEEERQKCEVLNKEQDS
                     IIAIFQEERGRRDNEEEALRKKLKDAEVTINKLKEKLTELQLEKMKSMGHKWTQ"
     misc_feature    547..921
                     /gene="LOC139904485"
                     /note="Histidine kinase-like ATPase domain; Region:
                     HATPase; cl00075"
                     /db_xref="CDD:469604"
     misc_feature    order(598..600,610..612,619..621,697..699,703..705,
                     709..711,715..717,799..810,847..849,853..855,898..903,
                     907..909)
                     /gene="LOC139904485"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340391"
     misc_feature    order(736..738,808..810)
                     /gene="LOC139904485"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340391"
     misc_feature    1276..1710
                     /gene="LOC139904485"
                     /note="Morc6 ribosomal protein S5 domain 2-like; Region:
                     Morc6_S5; pfam17942"
                     /db_xref="CDD:465579"
     misc_feature    <2176..>2508
                     /gene="LOC139904485"
                     /note="Possible nuclease of RNase H fold, RuvC/YqgF family
                     [General function prediction only]; Region: COG2433"
                     /db_xref="CDD:441980"
ORIGIN      
        1 catattataa agcgttccta tcacatatgc acatgtacaa atccaaaatc aacacatttt
       61 tccctttctt ctttctttct tccttctccc cttgagcgta aaaaagtgaa tcgccatcac
      121 cgccgtatcg ccgccatggc cgaaattaaa gttaaggaag aatacgttga agtgaacagc
      181 actactacaa gtaaatacaa aaatgcttcc gaaatcccgg tgatcgatct cgaggattct
      241 gcttccgact ccgattctgg tgacgatgta tcgtcttccg gtgacggaaa tcgtaacgga
      301 aagaggtcta gggttccaaa tgaagttaat aacgacagta ataagaggaa taaacgtggt
      361 aacggtgtcg ttcttccgga agggtttctg gatcctttac cgaacaacga tttaacaccg
      421 cgtaatgcca aaagtagtag agtttgcaaa cagttttgga aggctgatga ttttgatgga
      481 ttggcttctg gtaatcagtg gaatacgtca gcaggtggta tggatcattt gagggttcat
      541 ccaaggtttc tgcattccaa cgcgactagt cataaatggg ttcttggtgc ctttgctgaa
      601 cttttggaca attcgctaga cgaggttggt aatggcgcca catatgtaaa agttgatatg
      661 ctcgaaaaca agaaaactga agacagaatg ttactgattg aggataatgg tggtgggatg
      721 gacccagata aaatgcgaca ttgcatgtct cttggttatt ctctgaaaag caaggtcaag
      781 gatacaattg gacaatatgg aaatggtttc aaaacaagta ccatgaggct tggagctgat
      841 gttgttgtct tctctcgctg ctccgggaaa tatggaaaaa ggtctacaca gagcattggt
      901 ttattgtctt acacattttt gcggagcaca gggaaggaag atatagttgt tcccatgctg
      961 gattatgaaa aaagtgcgca agaatggaag aagatggcac gtgtatcagc caatgattgg
     1021 aacaccaatc ttgaggcatt agtacaatgg tctccatttt ctagtgaaac agaactcttg
     1081 agacagtttg atcatatgaa ggatcagggt acacgaataa tcatttacaa tctatgggag
     1141 gacgatcaag gacagttgga gcttgatttt gacacagata aacatgatat ccaaattcga
     1201 ggtgttaatc gagatgaaaa aaatatagag atggcacaaa aatatcccaa ctctagacac
     1261 ttcttaacgt atcgtcattc actcaggagt tatgcatcga ttctctattt aagagttcct
     1321 tataacttcc ggatgattct tcgtgggaag gatgtggagc atcataacat aataaacgat
     1381 atgatgttga caactgaggt cacatataaa ccacagccta atttagaagg gctccttccg
     1441 gattcaaata tgtctgctac agttactgtt gggtttgtga aggatgcacg atcacatata
     1501 gatgtacaag ggttcaatgt ttatcataaa aacagactca ttaagccatt ttggagactc
     1561 tggaatgctg caggaagtga tggtcgcggg gtcataggtg tattagaagc taactttgtt
     1621 gaaccagcac atgacaaaca agggtttgag cgcaccaatg tgcttcagag acttgaaaca
     1681 aagcttattc aaacgcagaa gaaatattgg agtgaaaatt gtgacaaaat tggctatgct
     1741 cctcgacgca acaaaattgt ggatgataga gatacttttg atgaacacat acgtgaaacg
     1801 ccttctagaa ggaacaacgt tacatcagaa cggaagatac caactccaca atcagacaaa
     1861 attccttcac gtaaacatca aaatggtgta ggtgctagct cttccgagtc tacatcacat
     1921 ctgaatgaaa acgacgttga tgatgattta caaaccctca tgactacacg acgtgcagca
     1981 aatggaaaca gttctcagaa agaaccattc acccttaaaa cccgttcgat gtcagctgta
     2041 gaggtcagga atcaaggacc agagccatct gttgctccaa acgctaagga catgcaagtt
     2101 gtcacaccct cttactttaa gtcatctggt gttaatggta atgtaaacgg ttcttcaagt
     2161 tctaataata aaagtttaga ggcgttgacg gaagagaacc gtgagctgaa ggaaaggttg
     2221 aaaaagagag aagaagagat actaggtgat ttacagcacg acttagattc tgaaaaaaat
     2281 cggtgcaaag aacttgagtt gcagctggaa gaggaaagac aaaaatgcga ggttctaaac
     2341 aaagagcagg atagtataat cgctatattt caagaggaga gagggcgtag agataatgag
     2401 gaagaagctc taaggaaaaa gttgaaggac gctgaagtga cgattaacaa gttgaaggaa
     2461 aagctaacag agttgcagtt ggagaaaatg aaaagtatgg gccacaaatg gactcagtag
     2521 gaggctacga atattgcgat cggctatatc agagttgcat gtgttatcgt tttgtctaat
     2581 tttagtcgta tatctgttat agcaggtcta aggaggtgta tatggtaatc agtttttatc
     2641 tttactcttt tcctctttta agagtctttt gtaaactttg gtttatgtgg gaggtttgca
     2701 atgtaagttc ttttatttct cacacagatt atgtttgcct aaacatgcgt gaaacgttca
     2761 aggttttgag gattgcactt ctacgatctt acgt
//
LOCUS       XR_011778839             588 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904486), ncRNA.
ACCESSION   XR_011778839
VERSION     XR_011778839.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139904486"
                     /note="uncharacterized LOC139904486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904486"
     ncRNA           1..588
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904486"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904486"
ORIGIN      
        1 aacagcctga tttcctctca aaaaaataca cgacagatct tcaaaatcaa gattacatct
       61 tcattaactt aaatcgattt cgcatattgt aacagtacaa gaagcatata tggtttgatt
      121 ttgatctcaa tcaaacaatt aaacggagac cgattaactt ccgtttcata aatcgttagc
      181 actcaaggat cgattttctg ttgaagggga agaaattcgt cgaattatct gattggttcg
      241 ttgaaattta atatttgcaa cgagatttga gcctttaacg gatacacaag ttgtgaactt
      301 atcgagattg aggcacactt gtcgtcaagg ggaagatgca ttgagtcgag gaatcaaaaa
      361 acttgaacaa acgttggctc aaagtgttgc gaataatata acggaaggta gaaactatga
      421 cacacgtatg aaggcggtga ttgaggggct cgaagcgcta gaaaacttct cgaataaggt
      481 acatactaga aaagccgtca aagcaatacg tcctctggca acagaccgta cttataacag
      541 caaggcttgc tatagcaatt atcacattgc tgaaagacca aacacgtg
//
LOCUS       XR_011778840             620 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904487), ncRNA.
ACCESSION   XR_011778840
VERSION     XR_011778840.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..620
                     /gene="LOC139904487"
                     /note="uncharacterized LOC139904487; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904487"
     ncRNA           1..620
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904487"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904487"
ORIGIN      
        1 tcgtattatt cgaataaact tggaaataat ccggttacta caccggttta tgtttcacga
       61 acaacacaaa acatatcatt ctgatattca ggtttgcaaa aaaccccttt ttgattcaaa
      121 tcattatgaa cctgaatatt cgatggaaga tgtggacagg aattaggttt cagccgattg
      181 actacagtct atatcaattc aattactcat cttccagatt ttggatgaat atggaacaaa
      241 atatcatgta tctgtcctag aaaattacgc tcaggacgaa accttaattg caattaaagc
      301 tccgcatcac accacttaga agttccagat tgacgaggct gctgactttc ttcaaaggag
      361 atatagaata gtcctaagga gcactattag ttattaatct catgtttata tgtatgcatt
      421 ctactccttg ctcacctgat ttattatctc atgaaattcc agtgttttga gatcattgcg
      481 gtttggagtg taaacatctc atgaaatttc attgttttgg gattattgca gttaagagtg
      541 tataaagagg tggttctctt tacttttggg ttttttgtaa atctattttg atttttcttt
      601 taatcatcag gtactcactt
//
LOCUS       XM_071886409             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein VASCULATURE
            COMPLEXITY AND CONNECTIVITY-like (LOC139904488), mRNA.
ACCESSION   XM_071886409
VERSION     XM_071886409.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139904488"
                     /note="protein VASCULATURE COMPLEXITY AND
                     CONNECTIVITY-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139904488"
     CDS             55..537
                     /gene="LOC139904488"
                     /codon_start=1
                     /product="protein VASCULATURE COMPLEXITY AND
                     CONNECTIVITY-like"
                     /protein_id="XP_071742510.1"
                     /db_xref="GeneID:139904488"
                     /translation="MVNKGVGAFVCLTIIALDITAGILGIRAEAAQNQEKHLRLWLFE
                     CKQPSEDAYRLGFAAIVLLIIAHVLANLLSGCTACSHEEIHKASLGRQLSLLSLFFTW
                     IILAVALGMLVIGTKANHKSNASCGLSHHHFLSIGGILCFVHSLFSIAYYVTATASIH
                     "
     misc_feature    229..492
                     /gene="LOC139904488"
                     /note="Protein of unknown function (DUF1218); Region:
                     DUF1218; pfam06749"
                     /db_xref="CDD:462000"
ORIGIN      
        1 aaacacatta ttctactcca tagtattcca ttttctagtt taaacttagt cacaatggtt
       61 aacaaaggtg tcggcgcgtt tgtgtgtctc accattatcg cactcgatat aaccgctggt
      121 attcttggga tcagagctga agcagcccag aatcaggaaa agcatttgag gttgtggttg
      181 tttgaatgca aacaaccgag cgaggatgcg tataggctcg gttttgctgc aattgtgctg
      241 ctgataatag cccatgtttt ggctaatttg ctaagtggtt gcactgcttg tagtcatgaa
      301 gagatccata aagcatctct tggcagacag ttgtcattgc tatctctctt ctttacatgg
      361 ataatcctgg ccgttgcatt ggggatgcta gtgattggga cgaaagcaaa ccacaaatcg
      421 aatgcatcgt gtggactgtc gcatcatcat tttctttcaa ttggagggat tttatgtttc
      481 gttcatagcc ttttttctat cgcttattac gttactgcca ctgcttccat tcattgaaaa
      541 gtcaaaaagt caaatgcttt tttgact
//
LOCUS       XM_071886410            1472 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitogen-activated protein
            kinase homolog NTF4-like (LOC139904489), mRNA.
ACCESSION   XM_071886410
VERSION     XM_071886410.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1472
                     /gene="LOC139904489"
                     /note="mitogen-activated protein kinase homolog NTF4-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 101 Proteins"
                     /db_xref="GeneID:139904489"
     CDS             50..1234
                     /gene="LOC139904489"
                     /codon_start=1
                     /product="mitogen-activated protein kinase homolog
                     NTF4-like"
                     /protein_id="XP_071742511.1"
                     /db_xref="GeneID:139904489"
                     /translation="MDPTNQPTDTEMSDASAAPPPPPQQPMAGVDTIPAILSHGGRFI
                     QYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAVKKIANAFDNKIDAK
                     RTLREIKLLRHMDHENVVAIRDIIPPPERMAFNDVYIAYELMDTDLYQIIRSNQPLSE
                     EHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMT
                     EYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMEL
                     IGTPSEAELGFLNENAKRYIRQLQHYPRQSFNDKFPQVHPAAIDLIEKMLTFDPRQRI
                     TVEDALAHPYLTSLHDISDEPVCLNPFNFDFEHHAPTEEQMKEMIYREALAFNPEYQQ
                     HL"
     misc_feature    206..1213
                     /gene="LOC139904489"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Plant TEY Mitogen-Activated Protein Kinases; Region:
                     STKc_TEY_MAPK; cd07858"
                     /db_xref="CDD:143363"
     misc_feature    order(245..256,260..265,269..271,308..310,314..316,
                     365..367,407..409,470..481,488..490,494..499,605..607,
                     611..613,617..622,626..628,656..661,668..670,701..703,
                     707..718,722..724,836..838)
                     /gene="LOC139904489"
                     /note="active site"
                     /db_xref="CDD:143363"
     misc_feature    order(245..256,260..265,269..271,308..310,314..316,
                     407..409,470..481,488..490,497..499,611..613,617..622,
                     626..628,656..661)
                     /gene="LOC139904489"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:143363"
     misc_feature    order(365..367,494..496,605..607,611..613,668..670,
                     701..703,707..718,722..724,836..838)
                     /gene="LOC139904489"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:143363"
     misc_feature    order(398..400,482..487,500..502,533..535,542..544,
                     563..565,629..643,1091..1093,1097..1099,1106..1108)
                     /gene="LOC139904489"
                     /note="KIM docking site [polypeptide binding]; other site"
                     /db_xref="CDD:143363"
     misc_feature    order(656..691,692..724)
                     /gene="LOC139904489"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:143363"
ORIGIN      
        1 tatacttttt ctattgtttt taacttgtta ttttaattaa tcaaccaaaa tggatccaac
       61 aaatcaacct acggataccg aaatgtccga cgcctctgct gctcctccgc caccgccgca
      121 gcaaccgatg gccggagtcg atactattcc ggcgatactc agccacggcg gtaggttcat
      181 tcagtataac atatttggca atatctttga agttactgct aagtataaac ctcctattat
      241 gcctatcggt aaaggcgcct acggcatagt ttgttcggct ttgaattcag agacgaatga
      301 gcatgttgct gtcaagaaga tagcgaatgc tttcgacaat aaaatcgatg cgaagaggac
      361 tttaagagaa attaagcttc ttcgtcatat ggatcatgaa aatgttgttg ctatcagaga
      421 tataattcca cctccagaga ggatggcatt taatgatgtc tacattgctt atgaactcat
      481 ggatactgat ctctatcaaa ttattcgttc aaatcaacca ttatcggagg agcattgcca
      541 gtattttctg tatcagattc tgcgtgggtt aaaatacata cattctgcaa atgtgctgca
      601 cagggatttg aagccaagca atcttctcct gaatgctaat tgtgatctga agatatgtga
      661 ttttggatta gcgcgtgtta catctgaaac tgattttatg acagagtatg tagttacaag
      721 atggtaccgt gcaccagagc tgttgttaaa ctcttctgat tatacagccg ctatcgatgt
      781 atggtcagtc ggatgcatat ttatggaatt gatggaccgc aagccgttat ttcctggtag
      841 agatcatgta caccagcttc gattacttat ggagctaatt ggaactccat cagaagctga
      901 attagggttt ctgaatgaaa atgcaaaaag atacatccga caattacaac attacccacg
      961 acaatcattc aatgacaagt ttcctcaagt tcatcctgct gctattgatc ttattgaaaa
     1021 gatgttgacg tttgacccga gacagagaat tacagttgaa gatgcacttg cccatcctta
     1081 tttaacatca ctacacgaca tcagcgacga gccggtttgc ttgaaccctt ttaacttcga
     1141 ctttgagcat cacgccccaa ccgaagaaca gatgaaggag atgatttata gggaggctct
     1201 tgcatttaat ccagagtacc agcagcatct ttgaaaagta caccattctg tatttgtttg
     1261 ttgtgtggtt ttatttgtta ttagtgtggt acttgtgact agatgatatc atctgtttgt
     1321 tgtatataaa cattttcatc taaaacctgt tgttgagttg tttggttagc cccttaactt
     1381 cgcaaccaat acaaattaga atcttgtgtc gtatgtatta tcattatcat tatcatcgtt
     1441 attaaaacag atgacttttt ttcgtcattt tt
//
LOCUS       XM_071886411            1469 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904490), mRNA.
ACCESSION   XM_071886411
VERSION     XM_071886411.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1469
                     /gene="LOC139904490"
                     /note="uncharacterized LOC139904490; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904490"
     CDS             306..1322
                     /gene="LOC139904490"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742512.1"
                     /db_xref="GeneID:139904490"
                     /translation="MASKPENAKKENWTKEMVLEFCQFLNKYITKHGQTSPFKWVSLQ
                     PDFERTIKHKFNSDRALKNKYDSMRKDYNLWKSLKNGETGLGWNESTKQLNCSDEWWK
                     TKTAENSKYAAIRKNQPSAQLQDEWDQLFGDAVASGSNCVAPSMDSSIINEVHVENLV
                     DDDVEVGCDVDAYQVNNDTPFNLEELETEEPNFFRNFYNEATQQNASAPIPSEVAKKF
                     DMTTKINTKPKPANMKRKGRESSGSLMLKNHLAQSSVTQQRVLQMLEADSSKLDQSTM
                     FTVGAAVGVLDRMVDVGLLTEAGELWLFAIRLFENPIKREIFINLRSDNGRLAWLQKE
                     RSDS"
     misc_feature    <330..611
                     /gene="LOC139904490"
                     /note="myb-like, SANT family; Region: GT1; cl23759"
                     /db_xref="CDD:474047"
ORIGIN      
        1 tagagctatt agcttttagt ttttatgaaa aagctcttat ataatttttt aacctcgttt
       61 ggttgcactg acttttagct tttagaaaat tttaaaaagc tccattcagc tccatattta
      121 aacgctccta catctagcgt ttaggaaaaa aaaaaagctt ttggcccatt aataacctta
      181 tatacccttt acgtaaatta accttacgac ctaatttttt tttcatacga cgagcaggcg
      241 gcgattgcat ccttctggtt gatcactaac gtcttcttct tccacagtcg cttgcatcat
      301 tcacgatggc ctcaaaacct gagaatgcaa aaaaagaaaa ctggacaaaa gagatggttc
      361 tggaattttg tcagttctta aataaatata tcacgaagca tggtcaaact tctccattta
      421 aatgggtatc ccttcaacca gattttgaaa gaactataaa acacaaattc aacagtgata
      481 gagctctaaa gaacaagtat gatagtatga gaaaggatta caacctctgg aagtcactga
      541 agaacggaga gactggtctt ggttggaatg aaagtacgaa gcaacttaat tgttctgatg
      601 aatggtggaa aactaaaact gcggaaaact ctaaatacgc agcaattagg aaaaatcagc
      661 catcagcaca actacaagat gaatgggatc agttatttgg cgatgcagtt gcaagtgggt
      721 cgaattgtgt ggcgccttca atggactcga gtataatcaa tgaggtgcat gttgagaacc
      781 ttgtcgatga tgatgttgag gtgggttgtg atgtagatgc ttatcaagta aacaatgaca
      841 cacctttcaa tctagaggag ttagaaacag aagagcccaa cttttttcgt aacttttata
      901 atgaggccac tcaacaaaat gcgtcggcac caatcccaag tgaggttgct aaaaaatttg
      961 atatgactac taaaataaac acaaaaccca aaccagctaa catgaaacgt aaaggaagag
     1021 aatcatcggg atctttaatg cttaagaacc atttagcgca aagtagtgtc actcaacaac
     1081 gtgttctaca aatgttagaa gcagattctt ccaaactcga tcaaagtact atgtttactg
     1141 ttggagctgc tgtaggtgtg cttgaccgaa tggttgatgt aggattactg acagaagcag
     1201 gggagttgtg gttgtttgca attagattat ttgaaaatcc gataaaaaga gaaatattta
     1261 tcaatttgcg gagtgataat ggcaggctag cttggttgca aaaggaaagg agcgacagct
     1321 gaagtttctt ttagcatgtt tttttttgtt ttttcaattg ttattttaat ggtttatttt
     1381 tttccctatg tgtgttagtg acataaatat gttggatatt agttggtata ttttttatat
     1441 aattttttta ctagagaata gtttgtgtt
//
LOCUS       XR_011778841             646 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904491), ncRNA.
ACCESSION   XR_011778841
VERSION     XR_011778841.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..646
                     /gene="LOC139904491"
                     /note="uncharacterized LOC139904491; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904491"
     ncRNA           1..646
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904491"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904491"
ORIGIN      
        1 aggctatcta aatgtttgtt attttaactt tgacatttga cttttaactt ttccttcttc
       61 tgcaaagaag tgaatgttct aatattgtga agaaaaaaaa acttcagtta aatgctaatg
      121 gacttaggca aggtgtgaaa ctaactttct tttatttgta catacaacga agtccctctc
      181 tctccataac tattaccgag acacgagccg atatggtagg aagaagccag ttcattgtca
      241 ccagaattgt tacatgggga tgaaagtgaa gaagccattt tgaaagctca ggctgtgtta
      301 tctagacgtt taagtgatgc acgttcatgt gaaactctac ccactgttga gaaagttaaa
      361 cctagatcaa ctgatactcc acccatgctt gatataccga gtactacagc tattggaatg
      421 acacttcatg aaaagaaatg gacagatggc agtgtttcat cggatgcgat ttctttggac
      481 cttgcaaggt ttggacagaa tgctttgcaa aggaggaatt tggctgcagt agctgcagct
      541 gaagctttgc aagtggccct tgcttctgaa tctatgctga ggagtttgag gtgaaccatt
      601 attgtttgtt gaatagtaac tgataatttt tatcttaata ctgtga
//
LOCUS       XR_011778842            1040 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904492), ncRNA.
ACCESSION   XR_011778842
VERSION     XR_011778842.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1040
                     /gene="LOC139904492"
                     /note="uncharacterized LOC139904492; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904492"
     ncRNA           1..1040
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904492"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904492"
ORIGIN      
        1 tccttgaatt tttttgcaca ataccctatc aatttcgtat aaaaacgaaa cattatataa
       61 ttatgccgga agtgtttccg tcgatttgcg gtttgttgtg gtccccaacg aacgatttgt
      121 gtaagaatta aggtttcaga aggcgattga aaccctaatc attaattgat ttttaatggt
      181 tcacgatgat ggtgatgcga agtggttctc agaaattccg aagcatttag agaagaagcg
      241 atgtggttga atctatctgt aatgaatttt gcaagtttac acttatctct caaaattaga
      301 gttaaaactt gtctgatctc catcgcttcc tgactaattt tacctgtatg aaggcaatga
      361 ttctaaatta cattttgata tcccttcaat ccaagttacg gtatgtatga acgcgtctca
      421 aattaggtat ttactcttca actcgtgcat caggatcgaa tcgattttcg atagcagata
      481 ttttgatttt gatgatgtga acaaacaata tctgcatttg tgtgtggtaa gagatcgtgt
      541 ttaactaaaa aataagcttt acatccttat cggttttctt tgttgattag tttatcgtca
      601 tgtacgtcgc tcatcaataa cccgatttga ggttttccct tctacgaata tacagataga
      661 tcgattgaat ggttgaacat atgctacata tggtgttctt ctatgatact ttgggatggt
      721 agcggttatc atctatcttc atttgttgat ttgaatgttc attgagatgt gcacctaata
      781 cgctaccgaa gagacgaaaa gattgggatg tgtagacgaa aagattggga tgtgtagacg
      841 attagtatgt gtcaactgta tatatttctc tagaattttt agagtataaa aaagtaggca
      901 tgccatttat gaaaacatat ggttttttaa tcaattttac tgttggtact ctgtgataaa
      961 acgtggtatc atttcagatc atcattatat attctgaaat actcttcact gattataatg
     1021 catgtatttt ttttgtctta
//
LOCUS       XM_071886412             917 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription repressor
            OFP1-like (LOC139904493), mRNA.
ACCESSION   XM_071886412
VERSION     XM_071886412.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..917
                     /gene="LOC139904493"
                     /note="transcription repressor OFP1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904493"
     CDS             1..834
                     /gene="LOC139904493"
                     /codon_start=1
                     /product="transcription repressor OFP1-like"
                     /protein_id="XP_071742513.1"
                     /db_xref="GeneID:139904493"
                     /translation="MGNYKFKITNILPNSWFYNSKYSNTNSKGNKNNKTTKKQQITTI
                     SSPKTSSPDQRKSYYFTRGLKKSDLNTDTPLKTRSPDPPRKSSNKRRPTNPKKPVHRK
                     SVSPESVSTYSNSSDTDILSPKLSVTCSCKTNSSYDDVYSKVDLPPIITKLRTQQDNK
                     INNISTTRTRSPIRRLKGNCYSPRIGNRVRVHGIYGGRRSYGSRRSLSESMALVKTSV
                     DPGKDFKESMLEMIMENSMKSSKDLEDLLTCYLLLNSNEYHHLIIKVFKEIWLESSNI
                     N"
     misc_feature    1..120
                     /gene="LOC139904493"
                     /note="DNA-binding domain; Region: DNA_binding_2;
                     pfam13724"
                     /db_xref="CDD:433432"
     misc_feature    <76..>324
                     /gene="LOC139904493"
                     /note="104 kDa microneme/rhoptry antigen; Provisional;
                     Region: PTZ00449"
                     /db_xref="CDD:185628"
     misc_feature    649..819
                     /gene="LOC139904493"
                     /note="Transcriptional repressor, ovate; Region: Ovate;
                     pfam04844"
                     /db_xref="CDD:461454"
ORIGIN      
        1 atgggaaact ataagttcaa aatcacaaat atattaccaa attcttggtt ttacaattcc
       61 aaatattcga ataccaactc aaaaggtaat aagaacaata aaacaaccaa aaaacaacaa
      121 atcaccacaa tatcgtcacc aaaaacatcc tctcctgacc aaagaaaatc atactacttt
      181 actaggggct taaaaaaatc tgacctgaac accgacaccc cacttaaaac ccgctcaccc
      241 gacccgccaa gaaaatcatc caataagaga cgacccacta acccgaaaaa gccagttcac
      301 cgaaaatcgg tctcaccaga atccgtttcc acgtattcaa attcctccga taccgacatt
      361 ttatcaccca aattatcggt tacttgttct tgcaaaacaa actcgtcgta cgacgacgtt
      421 tattccaaag ttgatctccc tccaattata acaaaattac gtactcaaca agataataaa
      481 attaataaca tttctacgac tcgaacacga agtccgatta gaagattgaa aggaaattgt
      541 tattcaccaa gaattggaaa ccgtgttaga gttcatggga tttacggtgg ccggagaagc
      601 tatggaagtc gtcggagctt gtcggagagt atggcgttgg tgaaaacgtc tgtggatcca
      661 ggtaaagatt ttaaagaatc aatgctggag atgataatgg agaatagtat gaagagttca
      721 aaagatttgg aagatttatt aacatgttat ttattattaa attctaatga gtatcatcac
      781 ttgattatta aagtgttcaa agaaatttgg cttgagagta gtaatattaa ttagattgta
      841 ataacgtaat taaatcctct tttctgttac acaagaatat attcttgtct aacattttct
      901 acgcatgtta atattta
//
LOCUS       XM_071886413             946 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides agamous-like MADS-box
            protein MADS4 (LOC139904494), mRNA.
ACCESSION   XM_071886413
VERSION     XM_071886413.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..946
                     /gene="LOC139904494"
                     /note="agamous-like MADS-box protein MADS4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 34 Proteins"
                     /db_xref="GeneID:139904494"
     CDS             42..773
                     /gene="LOC139904494"
                     /codon_start=1
                     /product="agamous-like MADS-box protein MADS4"
                     /protein_id="XP_071742514.1"
                     /db_xref="GeneID:139904494"
                     /translation="MGKGRLELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVA
                     LIIFSTRGKLYEFSSTSSMMRTLERYEKCSFGPPEQRKPAKEDLQEQSSYQEYMRLKE
                     RYDALKQLERNYNGEEIDSLTTNELESLERQLHCSLRQIRTIRTQSMLGKLHEQQRTE
                     QHLYESCKTLQLRLDEVSQVDALQWDPHANGMVYGHHQVSQPLRNVFYDPTGCETTLQ
                     IGYQTEQMSAVTSTSMNNQMQGWPA"
     misc_feature    45..263
                     /gene="LOC139904494"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; Region:
                     MADS_MEF2_like; cd00265"
                     /db_xref="CDD:238165"
     misc_feature    order(45..53,57..59,63..65,78..80,84..86,96..101,108..113,
                     117..122,129..134,138..143,153..155)
                     /gene="LOC139904494"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     misc_feature    order(102..104,123..128,135..140,144..149,156..158,
                     171..173,177..179,183..185,201..203,207..209,228..230,
                     237..242,249..251,258..263)
                     /gene="LOC139904494"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238165"
     misc_feature    216..218
                     /gene="LOC139904494"
                     /note="putative phosphorylation site [posttranslational
                     modification]; other site"
                     /db_xref="CDD:238165"
     misc_feature    297..566
                     /gene="LOC139904494"
                     /note="K-box region; Region: K-box; pfam01486"
                     /db_xref="CDD:460228"
ORIGIN      
        1 gaagagattg aataagtgat agtagtaaca aagaaaaaga aatgggaaaa ggaaggttag
       61 agttaaagag aatagagaac aaaataaaca ggcaagttac ctttgcaaag agaagaaatg
      121 gtcttctcaa gaaagcttat gaactttctg ttctttgtga tgctgaagtt gctctcatca
      181 tcttctctac tagaggcaag ctctatgagt tctcaagtac ctctagcatg atgagaacac
      241 ttgagaggta tgagaaatgt agttttgggc cgccggagca acgaaaacca gcaaaggagg
      301 atcttcagga acaaagcagc taccaagaat acatgcggct caaagaacgc tatgacgccc
      361 tgaaacaact cgaaaggaat tacaatggtg aggagattga ctctttgacc actaatgaac
      421 tcgaatcact tgagagacag cttcattgtt cattgagaca gattagaaca ataaggactc
      481 aatctatgct cggtaagctc cacgaacaac agagaacgga acaacatctt tacgagtcct
      541 gcaagactct tcaactcaga ttggatgaag ttagccaagt agacgcgctt caatgggacc
      601 cacacgcaaa tggaatggtg tatgggcatc accaagtatc tcaaccgtta cgtaacgtct
      661 tctacgatcc aactggttgt gaaaccactt tgcaaattgg gtatcaaact gaacaaatgt
      721 cagcagtgac ctctacaagc atgaacaatc aaatgcaggg gtggcctgcc tgaaacaaga
      781 ttggatcttt tttcccgatt aatctagttc tattgttgtg ttcttgcaga catttgttct
      841 agctaatctt tgattaatat gtttatgttt aattgtgact tttatctatc ttcatcgaat
      901 ctaaattcaa gctatccact tgtatttgaa atgcaacagg ttcaat
//
LOCUS       XM_071886414             779 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thylakoid lumenal 17.9 kDa
            protein, chloroplastic (LOC139904495), mRNA.
ACCESSION   XM_071886414
VERSION     XM_071886414.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..779
                     /gene="LOC139904495"
                     /note="thylakoid lumenal 17.9 kDa protein, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139904495"
     CDS             15..737
                     /gene="LOC139904495"
                     /codon_start=1
                     /product="thylakoid lumenal 17.9 kDa protein,
                     chloroplastic"
                     /protein_id="XP_071742515.1"
                     /db_xref="GeneID:139904495"
                     /translation="MVTMSFNLTATHLLPQFPLKNTTIKQLTPIQSPPLSLSIPQNPN
                     LKTSYFLSNHLLSLVIAIITFTSPPPSLAIPSINNPIPPPNLPSPTTPFSQSKNLIVG
                     LDNGKIRPCPSNNPGCVSSNPKSSSFAFPWRIPEKALDNAVQQLQEAILETQKNPKIE
                     VVENTPDGQYLQATVDGGFGRDVLEFMVKGDVVSYRCMAAKVTYVYPFTTALGDSKGQ
                     EERIKKVVDQLGWDAPSFSAMD"
ORIGIN      
        1 tgaggccaaa atgaatggta accatgagtt tcaatttaac tgctactcat cttctccctc
       61 aatttccact caagaacaca acaatcaaac aattaacccc aattcaatct ccaccattat
      121 cactttcaat tccacaaaac cctaatctaa aaacctcata ttttttatca aatcatttgc
      181 tttcattagt cattgccatc atcacattca cttcaccacc accctcactt gcaatccctt
      241 caattaacaa cccaattcca cctcccaatt taccatcgcc caccacccca ttttctcaat
      301 caaaaaactt aatcgtcgga ttagataatg ggaaaattag accttgtcca tcaaacaatc
      361 ctgggtgcgt ttcgagtaat ccgaaatcat cgtcatttgc gtttccttgg aggattccgg
      421 agaaggcatt agataatgca gtacagcaat tgcaggaagc aattcttgaa acacagaaaa
      481 atcccaagat tgaagttgta gagaacactc ctgatggcca atatttgcaa gcaacggttg
      541 atggagggtt tggtcgtgac gttctagagt tcatggtgaa aggagatgtt gtctcttatc
      601 ggtgcatggc ggcaaaggtt acatatgtat accctttcac cacagcctta ggcgattcaa
      661 agggtcaaga agaaagaata aaaaaggttg tggaccaatt aggctgggat gcccctagtt
      721 tcagtgccat ggattagtat atcactttaa ataaatgtat atttacaaac aaaaaaaaa
//
LOCUS       XM_071886415             210 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904496), mRNA.
ACCESSION   XM_071886415
VERSION     XM_071886415.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..210
                     /gene="LOC139904496"
                     /note="uncharacterized LOC139904496; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904496"
     CDS             1..210
                     /gene="LOC139904496"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742516.1"
                     /db_xref="GeneID:139904496"
                     /translation="MADWGPVLVAVVLFVLLTPGLLFQLPGHNRLVEFGSMRTSCPAV
                     IVHAIIFFGMLTLFLITVGVHIYAG"
     misc_feature    4..201
                     /gene="LOC139904496"
                     /note="Protein of unknown function (DUF3339); Region:
                     DUF3339; pfam11820"
                     /db_xref="CDD:463361"
ORIGIN      
        1 atggcggatt ggggcccggt tctagtagca gtggtgttgt ttgtgctgtt aacacctgga
       61 ttattgtttc agttgcctgg tcacaatagg ctggttgagt ttggtagcat gaggaccagc
      121 tgccctgctg ttatcgttca tgccattatc tttttcggca tgcttacact ctttcttata
      181 accgtcggcg tacacattta tgctggctag
//
LOCUS       XM_071886416            2025 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CBS domain-containing
            protein CBSCBSPB1-like (LOC139904497), mRNA.
ACCESSION   XM_071886416
VERSION     XM_071886416.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2025
                     /gene="LOC139904497"
                     /note="CBS domain-containing protein CBSCBSPB1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139904497"
     CDS             168..1799
                     /gene="LOC139904497"
                     /codon_start=1
                     /product="CBS domain-containing protein CBSCBSPB1-like"
                     /protein_id="XP_071742517.1"
                     /db_xref="GeneID:139904497"
                     /translation="MPASHAGSSSRRSMALTSSSSHKKKVPENGAPDHRRSSISSTRS
                     MGLTGERTVKRLRLSKALTAPETTSIYEACRRMAARKVDALLVTDSRSLLCGILTDKD
                     IATRVIAREIDFETTPVSKVMTRNPVFVLADSLAVEALQKMVQGMFKHLPVVEHGQVI
                     ALLDIEKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGSSVSGSNAFVESLRERMFRP
                     SLSTIISENPKVVTVSPSDTVVTATKRMLEFRMSSVVATVDNKPVGILTSKDILMRVI
                     AQDLRPELILVEKVMTPNPECATLDTPIVNALHNMHDGKYLHLPVVDREGAVIAIVDV
                     LQITHAAITTVGNTAGIDNEAASSMMQKFWDSAMAITPVEEDDEIRSVSSFRLMSEAD
                     SLKSFPHPSSMLPNTFGFKIQDKHGRMHRFICDTRSLADLITAILQRLGDEIDRRNLP
                     HILYEDEDHDMVVLATDSDLSAAVEHARLSGWKGLKLHLDYSGTPKRRIGSTEKSSLD
                     FVQRDAWTTAYSSVAAGAALVAGLGMVAFLRRSGN"
     misc_feature    339..689
                     /gene="LOC139904497"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains similar to MUG70 repeat1;
                     Region: CBS_pair_MUG70_1; cd17781"
                     /db_xref="CDD:341417"
     misc_feature    order(339..341,345..353,417..425,615..617,651..653,
                     657..659,663..668,675..677)
                     /gene="LOC139904497"
                     /note="putative ligand binding site II [chemical binding];
                     other site"
                     /db_xref="CDD:341417"
     misc_feature    339..536
                     /gene="LOC139904497"
                     /note="CBS repeat [structural motif]; Region: CBS repeat"
                     /db_xref="CDD:341417"
     misc_feature    order(417..419,456..458,468..473,480..482,549..551,
                     615..623,663..665)
                     /gene="LOC139904497"
                     /note="putative ligand binding site I [chemical binding];
                     other site"
                     /db_xref="CDD:341417"
     misc_feature    549..677
                     /gene="LOC139904497"
                     /note="CBS repeat [structural motif]; Region: CBS repeat"
                     /db_xref="CDD:341417"
     misc_feature    852..1196
                     /gene="LOC139904497"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains similar to MUG70 repeat2;
                     Region: CBS_pair_MUG70_2; cd17782"
                     /db_xref="CDD:341418"
     misc_feature    order(852..860,924..932,1119..1121,1158..1160,1164..1166,
                     1170..1175,1182..1184)
                     /gene="LOC139904497"
                     /note="putative ligand binding site II [chemical binding];
                     other site"
                     /db_xref="CDD:341418"
     misc_feature    852..1040
                     /gene="LOC139904497"
                     /note="CBS repeat [structural motif]; Region: CBS repeat"
                     /db_xref="CDD:341418"
     misc_feature    order(924..926,960..962,972..977,984..986,1053..1055,
                     1119..1127,1170..1172)
                     /gene="LOC139904497"
                     /note="putative ligand binding site I [chemical binding];
                     other site"
                     /db_xref="CDD:341418"
     misc_feature    1053..1184
                     /gene="LOC139904497"
                     /note="CBS repeat [structural motif]; Region: CBS repeat"
                     /db_xref="CDD:341418"
     misc_feature    1389..1643
                     /gene="LOC139904497"
                     /note="The MUG70 protein is a product of the meiotically
                     up-regulated gene 70 which has a role in meiosis and
                     harbors a PB1 domain. The PB1 domain is a modular domain
                     mediating specific protein-protein interactions which play
                     a role in many critical cell...; Region: PB1_MUG70;
                     cd06409"
                     /db_xref="CDD:99730"
ORIGIN      
        1 aaaaaaactg gcttcatttt ctcctctaca atttcaaaaa aacattaatc tgaacggaat
       61 tcatcaacaa ttatattcca ttatgaacga tttatgatcc actgcagatt caattgctaa
      121 aattcagggt tgtcaattaa ggagatcgag ttaatttgta cgtgaagatg ccggctagtc
      181 atgcaggttc ttcatcacga agaagcatgg cgttaacatc ttcgtcttca cacaagaaaa
      241 aagttcctga aaatggagca cctgatcatc gtagatcatc gattagttct acacgttcaa
      301 tggggttaac gggagagcgt acagtcaaaa gattacgtct ctcgaaagct ttgacagcac
      361 ctgaaacgac aagcatctat gaagcatgcc gtcgaatggc tgctagaaaa gttgatgctc
      421 ttttggttac cgattcaaga tctttactat gtggaatatt gacagacaag gatattgcaa
      481 caagagttat tgctcgtgag attgatttcg agaccacgcc tgtctcaaaa gtgatgacaa
      541 ggaacccggt ttttgtacta gctgattctc ttgctgttga agccctgcaa aaaatggtcc
      601 aaggaatgtt taaacacttg ccagttgtag aacacggaca ggtaattgcg ttgcttgaca
      661 tagaaaaatg tttatatgac gcgattgcac gtatggaacg tgcagctgaa aaaggaaaag
      721 ctattgcagc tgcggttgag ggcgtcgaaa aacactgggg atcatcagtt tcaggttcga
      781 atgcgtttgt tgaatcgctt cgtgagcgaa tgttcaggcc atctttatct accataatat
      841 ctgagaatcc aaaggttgtt acagtttcac cgagtgacac agttgtaacg gcgacaaaaa
      901 ggatgcttga gtttcgtatg agttctgttg ttgcaactgt agataacaag cccgtcggga
      961 ttttaacatc gaaggatatt ttaatgagag tgatagcaca agatctacgg cctgaattga
     1021 ttttagttga gaaggtgatg actcctaatc cagaatgtgc aacgctcgat acgcctatcg
     1081 ttaatgccct gcataacatg catgatggaa agtatttgca tcttcccgta gttgatagag
     1141 agggagctgt tattgccatt gttgatgtac ttcagataac tcatgctgca ataaccacag
     1201 tgggaaacac ggcaggcata gataatgaag ctgcaagttc aatgatgcag aagttttggg
     1261 attctgcaat ggcaataact ccggtagaag aagatgatga aataagaagt gtgagttctt
     1321 tcagattaat gtcggaagca gattctttaa agtcttttcc tcatccttca tcaatgctac
     1381 ctaatacatt cggttttaag attcaagata aacatggtcg gatgcataga ttcatttgcg
     1441 atactcgaag tctggcagat cttataaccg caatacttca gagattaggt gatgaaattg
     1501 accgcagaaa cctcccacat attctgtatg aagatgaaga tcatgacatg gtggtacttg
     1561 caacagatag tgatctttct gcagctgttg aacatgcaag attatctgga tggaagggtt
     1621 taaagttaca tctagattat tcgggaacac ctaaacgtcg aataggctca acagaaaaat
     1681 ctagtctgga cttcgttcag cgagatgcat ggaccacagc gtacagttcg gttgcagctg
     1741 gagccgcttt agtagctggt ttaggcatgg ttgctttttt aagaagatct ggcaactgaa
     1801 acttgtttcg aatacgctca caagcagacc tttatcaaag ctagatcaat cttgtagaag
     1861 taatcagaga tggagctaga acatttttac aaactgttca tagtaaaaaa tagttatgtt
     1921 tatatcatat ttaattgaag agttaaatga ttcataagtc atactccgta atatattatt
     1981 attaatttgt acaattgttg taacttttga aagccaaatt ctata
//
LOCUS       XM_071886417            1491 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
            (LOC139904498), mRNA.
ACCESSION   XM_071886417
VERSION     XM_071886417.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1491
                     /gene="LOC139904498"
                     /note="stearoyl-[acyl-carrier-protein] 9-desaturase,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 55 Proteins"
                     /db_xref="GeneID:139904498"
     CDS             89..1273
                     /gene="LOC139904498"
                     /codon_start=1
                     /product="stearoyl-[acyl-carrier-protein] 9-desaturase,
                     chloroplastic"
                     /protein_id="XP_071742518.1"
                     /db_xref="GeneID:139904498"
                     /translation="MAIRFNPVTFQSEMYRSPSVIKLTNLRSPKYSMASTLGSSTPKV
                     EKKPITPPREVHLQVTHSMPPQKIEIFKSIEGWAEQNILTHLKPVEKCWQAQDFLPDP
                     ASDGFMEQVAELRARAKEIPDEYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASP
                     TPWAVWTRAWTAEENRHGDLLHMYLYLCGRVDMREIQKTIQYLIGSGMDPRTENNPYL
                     GFIYTSFQERATFISHGNTARHAKEHGDLKLAQICGTIASDEKRHETAYTKIVEKLFE
                     IDPDGTVLAFADMMRKKISMPAHLMYDGRDDNLFENFSAVAQRLGVYTAKDYADILEF
                     LVGRWKVADLTGLSGEGRRAQDYVCKLPTRIRRLEERSSARAKEGPMMPFSWIFDRQV
                     KL"
     misc_feature    98..1270
                     /gene="LOC139904498"
                     /note="acyl- [acyl-carrier protein] desaturase; Region:
                     PLN00179"
                     /db_xref="CDD:215091"
     misc_feature    order(356..358,362..364,368..379,386..388,392..394,
                     431..433,506..508,515..520,527..529,590..592,602..604,
                     614..616,632..637,644..646,653..655,662..670,677..682,
                     686..694,701..712,728..730)
                     /gene="LOC139904498"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:153109"
     misc_feature    order(491..493,512..514,521..526,596..598,752..757,
                     764..766,776..778,974..979,1016..1018,1028..1030,
                     1055..1057)
                     /gene="LOC139904498"
                     /note="putative substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:153109"
     misc_feature    order(494..496,608..610,617..619,767..769,866..868,
                     875..877)
                     /gene="LOC139904498"
                     /note="diiron center [ion binding]; other site"
                     /db_xref="CDD:153109"
     polyA_site      1491
                     /gene="LOC139904498"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gaaaacggaa cttggaacaa aactctgcta ctaaaacaca cagtaaaaac acacaaattt
       61 catacgcaaa tcttcaatca aattaatcat ggcgattaga ttcaatccgg tgacctttca
      121 atcggagatg tatcgatcac cttcggtcat taaattaacg aatctcagat ctcctaaata
      181 cagcatggct tcaaccctag gatcatcaac cccaaaggtt gaaaaaaaac caattactcc
      241 tccacgagag gtacatcttc aggtgacaca ctcaatgcca ccacaaaaga tcgagatatt
      301 caaatccatc gagggttggg ctgaacagaa catattgacc cacttaaagc ccgttgaaaa
      361 atgttggcaa gcacaagact ttttgcccga tcctgcatct gatggattta tggaacaagt
      421 tgcagaactc agagcaaggg ctaaagagat tcctgatgaa tactttgttg ttttggttgg
      481 agatatgata actgaagagg ctttacctac gtatcaaaca atgcttaata cacttgatgg
      541 tgtacgagat gagactgggg ctagcccgac accttgggct gtttggaccc gggcttggac
      601 cgctgaagaa aacaggcatg gtgatcttct tcatatgtat ctgtatcttt gtgggcgggt
      661 tgatatgagg gagattcaga aaactattca atatctcatt ggatctggga tggatcctcg
      721 caccgagaac aatccgtacc ttggattcat ctacacgtct ttccaagagc gtgcaacctt
      781 catctcccat ggaaacaccg ctaggcacgc aaaggagcac ggggacttaa aactagccca
      841 aatttgtgga acaattgcgt cagatgaaaa aaggcatgaa accgcataca caaaaatagt
      901 tgaaaaacta tttgaaatcg acccagatgg cactgttctt gcttttgctg atatgatgcg
      961 gaaaaagatc tcgatgcccg cacacttaat gtacgatggt cgtgatgaca acttatttga
     1021 gaatttctca gctgtagccc aaagactcgg tgtgtacact gctaaagatt atgctgacat
     1081 tttggagttt ttggtgggcc gatggaaagt agcggattta actgggctgt ctggtgaagg
     1141 ccgtagggcc caagactatg tttgcaagtt gccaacgaga attagaaggc tcgaggagag
     1201 gtcgtcagca agggcaaaag aaggcccgat gatgccgttc agttggattt tcgatcgaca
     1261 ggtgaagctc taaaaaaatg cagtagtatg tttaagttat gtttatgttg atctttatta
     1321 acagaggtta ataacgtatt tagatgtctg ttttatgtaa tgttgttttt ttttatttat
     1381 ttcttgaatt taaaatgtgt cgtgagtttg tgtgtatgta aactaatgtg gctgttgaac
     1441 atattataga acttgttatg ccaattttga taatgatggt tattgtctgt a
//
LOCUS       XM_071886418             934 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA N(6)-methyladenine
            demethylase ALKBH1D-like (LOC139904499), mRNA.
ACCESSION   XM_071886418
VERSION     XM_071886418.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..934
                     /gene="LOC139904499"
                     /note="DNA N(6)-methyladenine demethylase ALKBH1D-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139904499"
     CDS             23..778
                     /gene="LOC139904499"
                     /codon_start=1
                     /product="DNA N(6)-methyladenine demethylase ALKBH1D-like"
                     /protein_id="XP_071742519.1"
                     /db_xref="GeneID:139904499"
                     /translation="MINSNEKTTAYLWSKTKRFSLIGNDKEHGNLERSWVDLEKGMIL
                     LKNYVSVSDQVEIVNTCQKFGMGPGGFYEPLTRNGRTMNFQMMCFGRNWDPITRYDWK
                     HRSDGSEAPPIPNQLMSLAVNLLLEGQDMHLPLMDPDICIVKFYTTTFEELSLRQDLD
                     ESRSSLEGGLPVVSITVGDSAKFVYSYTGDVGHAKEVLLQSGDVLIFGGESRLIHHGI
                     KKIIPESAPLSLLQQTNLVPGSLNLTFKDYSLD"
     misc_feature    143..757
                     /gene="LOC139904499"
                     /note="2OG-Fe(II) oxygenase superfamily; Region:
                     2OG-FeII_Oxy_2; pfam13532"
                     /db_xref="CDD:433285"
ORIGIN      
        1 ggatgataat tatcatcttg atatgatcaa ctcaaatgaa aagacaacag catatttatg
       61 gagtaaaaca aaacgattca gtttaatcgg aaatgataaa gaacatggaa atcttgaaag
      121 atcatgggtg gatctcgaaa agggaatgat tcttttgaaa aattacgtca gcgtgagtga
      181 tcaggttgaa attgtgaata catgtcaaaa atttggtatg ggtcccgggg gattctacga
      241 acctttaacc agaaatggac ggacaatgaa ctttcaaatg atgtgcttcg gtagaaactg
      301 ggatccgata acaagatatg attggaaaca ccgaagtgac ggttctgaag caccacccat
      361 tcctaatcaa ctcatgtcat tggctgtaaa cttacttcta gaaggacagg atatgcactt
      421 gcctttaatg gacccagaca tatgtatcgt caaattttat actactacct ttgaagaact
      481 tagtcttcgt caggatctag atgaaagccg aagtagtctg gaaggaggat tgccggtggt
      541 ttccatcact gttggtgact ctgcaaaatt cgtgtatagt tatacaggtg acgtgggcca
      601 tgcaaaggag gttttgttgc aatcgggaga cgtattgata ttcgggggag agtctagact
      661 tatacatcat gggatcaaga aaattatccc agaatcagct cctttgtcat tgcttcaaca
      721 aaccaacctc gtacctggct ctcttaacct tacattcaaa gactactctc ttgattgaat
      781 gagtttcttt gcattttgaa tactacctgg tcttatttac aagttgtttt tatcaatatt
      841 cagtattcag tattattatt aaattaaatt aacttaattt ccgtaaggga tgattaccct
      901 acaacccgat atacttctta cataagcact gttt
//
LOCUS       XM_071886419             506 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kinesin-like protein KIN-14S
            (LOC139904500), mRNA.
ACCESSION   XM_071886419
VERSION     XM_071886419.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..506
                     /gene="LOC139904500"
                     /note="kinesin-like protein KIN-14S; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904500"
     CDS             82..444
                     /gene="LOC139904500"
                     /codon_start=1
                     /product="kinesin-like protein KIN-14S"
                     /protein_id="XP_071742520.1"
                     /db_xref="GeneID:139904500"
                     /translation="MLKNRCHLECSERRRLYNEVIELKGNIRVYCRCRPLNSDKIAKG
                     CTSVVDFESAQENEIKIVGTDSSKKQFKFDHIFRPDDNQDAVFTQTSPLVAKEELSRQ
                     ILTTSSDHLIRKLFESCV"
     misc_feature    151..>363
                     /gene="LOC139904500"
                     /note="Myosin and Kinesin motor domain; Region:
                     Motor_domain; cl22853"
                     /db_xref="CDD:473979"
ORIGIN      
        1 taaggtgagg aacatgaaat tttaaagaaa aggtatcaag aagaatgtga aataaagaaa
       61 aagtatcaag aagaatctga aatgctgaaa aatagatgcc atctagagtg ctcagagaga
      121 agacgtttgt acaatgaagt gattgaactt aaaggaaaca ttagggttta ttgtcggtgt
      181 agaccgttaa acagtgacaa gattgctaaa ggatgcactt cggttgttga ctttgaatct
      241 gctcaggaaa atgagataaa gatagttggt actgattcat ctaaaaagca attcaagttt
      301 gatcatatat ttagacctga tgacaaccaa gatgctgttt tcacccaaac ttcacctctg
      361 gtggcaaaag aagagttatc acgtcaaata cttactacaa gttcagatca tctaattagg
      421 aagctttttg aaagttgcgt atgaacaatt atagtcataa ttgccacctt cattctttgt
      481 cttggatttt tttgttttgt ttacaa
//
LOCUS       XR_011778843             421 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904501), ncRNA.
ACCESSION   XR_011778843
VERSION     XR_011778843.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..421
                     /gene="LOC139904501"
                     /note="uncharacterized LOC139904501; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904501"
     ncRNA           1..421
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904501"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904501"
ORIGIN      
        1 ttattattat tctaattatt gcatattttt tatctatata tacatatata tataggaatg
       61 gctgtacaaa atgtatattt gtgggtttaa agcacatatg gctctacaag tttgttggct
      121 cgatgctggg ttaattcgat agaatggagt ggcaaggaag ggttggttca atacatcttc
      181 cgaggttata tttgcagtcg ttggataaat tacaggctta cttaatatca tccactcagc
      241 tttcagtttt ccctcaagtg ctaatgactt ggagaaactt gagcaagtga attttttgtg
      301 agaccaaaag aatgcaagca gctggtacaa gacttaactg tggagatgtg gagacgacta
      361 acagaggaat tgatacatag gagtaaatcg caatatgggc cgtgcgtatg caaggcataa
      421 g
//
LOCUS       XM_071886420             985 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904502), mRNA.
ACCESSION   XM_071886420
VERSION     XM_071886420.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..985
                     /gene="LOC139904502"
                     /note="uncharacterized LOC139904502; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904502"
     CDS             302..643
                     /gene="LOC139904502"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742521.1"
                     /db_xref="GeneID:139904502"
                     /translation="MYDNKMKKQDKLKSFQQNASSLFELYPKDISFRKTDLVFFPVCR
                     HNHFFVPVFDLKVPTLLILDNASLVSNFNAKYAKFCNLVQHCLGEHLKMQNHPMAMMI
                     KNMHLHRIKIP"
ORIGIN      
        1 agatgaggta tattaaaatc cataaagcaa atcttcaatg gcatttgatt caatatcatc
       61 ccgatcataa gagctattaa catgatgtgt ttttgagctt tagaaaagtg aaattatatt
      121 tgaagttaaa aatgctggtt ggaatgttca tcgtgtgacg ttggaatcac tttgtccaga
      181 gttatacgtt gaggcttgtg tgattgatac ctggagtttt atactaaatc acgagcgaaa
      241 gtatagagat ccagccaggc gaacaaagtt tttctttcca acgtcgatca tttggtcata
      301 catgtatgac aacaagatga aaaaacaaga taaactaaag tcatttcaac aaaatgcctc
      361 atcattgttt gaattgtatc ccaaggatat ttctttccgc aaaactgatc tggtgttttt
      421 cccagtctgc agacataatc atttctttgt ccccgtgttt gatttgaaag ttccaacgct
      481 cttaatactt gacaacgctt cattggtgtc aaacttcaac gcaaaatatg ccaaattctg
      541 caaccttgtg caacattgcc ttggcgagca tctaaaaatg caaaatcatc caatggcgat
      601 gatgattaaa aacatgcatc tacatagaat caagatacca tgaacaacga gagataatgt
      661 tgttgattgt ggagtttttg ccatgtatca catggacaga ttcaaagaca cacccgatat
      721 gaattggaag gagaaactag ctccggaatc gttggttaaa aaaaaaatca tctaaggaag
      781 ttgagagtta ggtatgcagc aaaaatttta acacattctt aaaattcgca tgccttggcg
      841 atgattcaaa gtgcaaatat gtttaacaga tttcatccaa aagaagatta taggaagttt
      901 gttgtgaatg caaaaaaatc aagagttgag cgggttgcga aatcaaatga gtccttacca
      961 aaatcaaagt gaagtgttat gttga
//
LOCUS       XM_071886421             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides molybdopterin synthase
            catalytic subunit-like (LOC139904503), mRNA.
ACCESSION   XM_071886421
VERSION     XM_071886421.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139904503"
                     /note="molybdopterin synthase catalytic subunit-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139904503"
     CDS             1..585
                     /gene="LOC139904503"
                     /codon_start=1
                     /product="molybdopterin synthase catalytic subunit-like"
                     /protein_id="XP_071742522.1"
                     /db_xref="GeneID:139904503"
                     /translation="MAGEHEKNLVEILEENHQIDINKYTNYVHSPQCGAIATFYGNTR
                     DTFDGKTVVELRYEAYVPIAIRCLNTICSSARSMWDLNAVAAAHRLGPVSVGETSVFV
                     AISSVHRVDALDACKFVIDEIKASVPIWKKEVYSNGVVWKENSEFHERRSEIGKISGC
                     CKPKVKVEAEVATPVKNGYCGPKVKVEDDVSVGS"
     misc_feature    order(73..75,85..87,100..102,106..120,124..126,130..132,
                     292..294,319..321,325..327,349..351,361..363)
                     /gene="LOC139904503"
                     /note="MoaE homodimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:238385"
     misc_feature    88..420
                     /gene="LOC139904503"
                     /note="molybdopterin synthase catalytic subunit; Region:
                     PLN02390"
                     /db_xref="CDD:178014"
     misc_feature    order(172..174,178..180,187..189,196..198,208..210,
                     262..264,370..375,379..381,385..393,421..423)
                     /gene="LOC139904503"
                     /note="MoaD interaction [polypeptide binding]; other site"
                     /db_xref="CDD:238385"
     misc_feature    order(370..372,391..393)
                     /gene="LOC139904503"
                     /note="active site residues [active]"
                     /db_xref="CDD:238385"
ORIGIN      
        1 atggccggtg aacatgaaaa gaacttggtg gaaatcttgg aagaaaatca tcaaattgac
       61 atcaacaagt acacaaatta cgtacactcg ccacaatgtg gtgccattgc cactttctat
      121 ggcaatacgc gcgacacatt tgatggaaag actgtagtag aattaagata cgaagcttat
      181 gtaccaatag ccattcgttg ccttaacacc atatgttcat cagcgcgttc tatgtgggat
      241 ctcaatgctg ttgctgcagc tcacaggctg gggcccgttt ctgtgggtga aacgagtgtg
      301 tttgtcgcta tttcatctgt tcatcgggtt gatgcattag atgcttgtaa atttgtgatt
      361 gatgagatca aagcgtcagt tccgatatgg aaaaaagagg tttattcaaa tggtgttgta
      421 tggaaggaaa actcggagtt tcatgagagg agatcggaaa ttgggaaaat tagtggttgc
      481 tgcaaaccga aagtgaaagt ggaggctgag gtggctacgc ccgtaaaaaa tggttattgt
      541 gggcccaagg tgaaggtgga agatgatgta tctgtgggat cttaa
//
LOCUS       XM_071886422            2195 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nucleotide
            pyrophosphatase/phosphodiesterase-like (LOC139904504), mRNA.
ACCESSION   XM_071886422
VERSION     XM_071886422.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2195
                     /gene="LOC139904504"
                     /note="nucleotide pyrophosphatase/phosphodiesterase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 29 Proteins"
                     /db_xref="GeneID:139904504"
     CDS             164..2065
                     /gene="LOC139904504"
                     /codon_start=1
                     /product="nucleotide
                     pyrophosphatase/phosphodiesterase-like"
                     /protein_id="XP_071742523.1"
                     /db_xref="GeneID:139904504"
                     /translation="MNTFFFTVLLLLFSKGFLWRLCYGSYYSSIIIRSDLGGKVGPTD
                     EQPLSKIAIHKAFIALHESASIKPNPLLLGLKGEGTEWVNVELKYPNPSENDWVGVFS
                     PAKFDASDCYYESGKSHEAPCICTAPIKYMFANQSSSNYVATGRATLSFQIINQRADF
                     SFALFSGGLENPKLVAVSDPISFANPKAPVYPRLAQGKAWDEMTVTWTSGYNIDEAVP
                     FVEWGSKGDILKRSPAGTLTFTRGSMCGPPARTVGWRDPGFIHTSFLKELWPNTMYDY
                     RIGHRLLNGSVVWSSKMYSFKSSPYPGQDSLQRVIIFGDMGKAERDGSNEYACYQPGS
                     LITTDQLISDLDNYDIVFHIGDMPYANGYLSQWDQFTAQVEPIASIKPYMVASGNHER
                     SWPNSGGFYNTKDSGGECGVPAETMYYVPAENRAKFWYSTDYGMFHFCIADSEHDWRE
                     GSEQYAWIEKCLASVDRNKQPWLIFSTHRVLGYSSNSWYAMEGSFEEPMGREHLQKLW
                     QKYKVDIAFYGHVHNYERTCPIYQNQCVNPERYSYSGTVNGTIHVVVGGGGSHLSDFT
                     EIDTVWSLYKDHDWGFVKLTAFNHSSLLFEYKKSRDGLVYDNFTISRDYRDVLACVRD
                     GCEPTTLAS"
     misc_feature    359..718
                     /gene="LOC139904504"
                     /note="Fn3-like domain from Purple Acid Phosphatase;
                     Region: fn3_PAP; pfam17808"
                     /db_xref="CDD:375345"
     misc_feature    728..1054
                     /gene="LOC139904504"
                     /note="Purple acid Phosphatase, N-terminal domain; Region:
                     Pur_ac_phosph_N; pfam16656"
                     /db_xref="CDD:465220"
     misc_feature    1085..2002
                     /gene="LOC139904504"
                     /note="purple acid phosphatases of the metallophosphatase
                     superfamily, metallophosphatase domain; Region: MPP_PAPs;
                     cd00839"
                     /db_xref="CDD:277318"
     misc_feature    order(1106..1108,1229..1231,1238..1240,1328..1333,
                     1595..1597,1721..1723,1727..1729)
                     /gene="LOC139904504"
                     /note="active site"
                     /db_xref="CDD:277318"
     misc_feature    order(1106..1108,1229..1231,1238..1240,1328..1330,
                     1595..1597,1721..1723,1727..1729)
                     /gene="LOC139904504"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:277318"
     misc_feature    order(1337..1339,1343..1345,1364..1366,1370..1372,
                     1436..1438,1496..1504,1520..1522,1646..1651,1655..1660,
                     1667..1672,1877..1879)
                     /gene="LOC139904504"
                     /note="homotetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:277318"
     misc_feature    order(1349..1357,1361..1366,1370..1372,1430..1444,
                     1502..1504,1508..1510,1520..1522,1550..1564,1598..1600,
                     1652..1660)
                     /gene="LOC139904504"
                     /note="homotrimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:277318"
     polyA_site      2195
                     /gene="LOC139904504"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttaggtaggg atctgtgtgt catttgtgtg tctttaatat acgttcttga ttcttgatat
       61 gatgtatcag taactggtga tccgtatcca tagctgaacc cggccattat tatttgctta
      121 tttcaaacat gtgcactcca actgcttgat taaacgtcta acgatgaaca ctttcttctt
      181 cactgtattg ctgttgctgt tttctaaggg ctttttatgg aggctatgct atggctctta
      241 ttactcttct attattatac gcagcgatct tggtgggaaa gtgggtccta ctgatgaaca
      301 accactatca aagattgcaa ttcacaaagc ttttattgct ttacacgaat cagcttcgat
      361 taagccaaat ccacttcttc ttggtttgaa gggagaaggt actgaatggg tcaatgtgga
      421 gctcaagtac ccaaatccat ccgagaacga ttgggttgga gttttttctc cagcaaagtt
      481 tgatgcatcg gattgctact acgaatctgg caaatcacac gaggctcctt gcatatgcac
      541 tgccccgata aagtacatgt ttgcgaacca atctagttca aattatgtag caactggacg
      601 agctacattg agtttccaga tcatcaatca gcgagcagac ttttcctttg cgttattttc
      661 aggcggttta gaaaacccaa aattggtggc tgtttcggat cctatttcat ttgcaaaccc
      721 taaggctcct gtttatccac gcctcgctca agggaaggct tgggacgaga tgacagttac
      781 ctggacaagt ggctacaaca ttgatgaagc tgttccgttt gttgagtggg gttcgaaggg
      841 cgatattctt aagcgttctc cagctggaac attgacgttt actcgtggta gcatgtgcgg
      901 tccacctgca cgtacggtcg gatggcgtga tcctggtttt attcacacta gttttttaaa
      961 agaattgtgg ccaaacacta tgtatgatta taggattggg cacaggttgt tgaatgggtc
     1021 agttgtttgg agtagtaaaa tgtactcgtt taaatcatcc ccatatccag gacaggattc
     1081 gctgcagcgt gtgattattt ttggagatat gggaaaggca gaacgagatg ggtcaaatga
     1141 gtatgcttgt tatcagccag ggtcactcat tactacggac caactaatca gtgatcttga
     1201 taactatgac atagttttcc atatcggaga tatgccatat gctaatggat atctctcaca
     1261 gtgggaccag ttcacagcac aagttgaacc cattgcgtcg attaagcctt acatggttgc
     1321 aagtggcaat catgaacgat cttggcccaa ttctggaggc ttctataata caaaagattc
     1381 aggtggggag tgcggtgtgc ctgctgagac catgtactat gttcctgccg aaaatagagc
     1441 taaattttgg tactcaacgg attatgggat gtttcacttt tgcattgcgg attcagaaca
     1501 cgattggaga gagggttcgg aacagtacgc atggatagag aagtgtctag catcagttga
     1561 ccgaaacaaa cagccgtggt tgatcttttc aactcatcgt gtgcttggat attcatcaaa
     1621 cagttggtat gcaatggaag gttcgttcga agagcccatg ggaagagaac acttgcagaa
     1681 gctatggcag aaatacaaag tagacattgc attctatgga catgtccata actatgaaag
     1741 aacctgccct atataccaga accaatgtgt caaccccgaa aggtatagtt attctggtac
     1801 tgtaaatggg acgattcatg ttgttgttgg tggaggagga agtcatttgt cagattttac
     1861 ggagatcgat acagtttgga gtttgtataa agatcacgat tgggggtttg ttaaacttac
     1921 ggcatttaac cactcttcac ttctttttga gtacaagaag agtcgagatg gattagtgta
     1981 tgataacttt acgatatcta gagactatag ggatgtgttg gcatgtgtac gtgatggatg
     2041 tgaacctaca acattagcga gttaaaccga tatgcaaaat gtttgaacta ttatttgggt
     2101 tgtaactaat cggacccttt aatggaagct tgtatacatt ttgctttgta ttcttgtaac
     2161 gtgaaaccta atttaatgaa gatatgtaat atgta
//
LOCUS       XR_011778844             369 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904505), ncRNA.
ACCESSION   XR_011778844
VERSION     XR_011778844.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..369
                     /gene="LOC139904505"
                     /note="uncharacterized LOC139904505; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904505"
     ncRNA           1..369
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904505"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904505"
ORIGIN      
        1 aagttattta tttttctacc tttattttat atttttatta cattatgagg acttacagta
       61 tgaggcatac gacatgaagc tgtcatcatt taaagatttg cagtcagtta agtcaaaggg
      121 gttcagagat gaagcattag caagcataac ttatgttgct catgttacat tcaccactat
      181 aacaagtggt gaattgcatg ggtatcatac agagatggtg tgatggagca tgaaaataag
      241 ccttatgctg ctgtgaaggg gactcaaata gtgatttaga atctattcta taacatgatt
      301 gctcgaatga aaactctaaa gaattctgct gacgattatc caaagattga tgacctgcta
      361 agttgtttt
//
LOCUS       XM_071886423            1041 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bidirectional sugar
            transporter SWEET14-like (LOC139904506), mRNA.
ACCESSION   XM_071886423
VERSION     XM_071886423.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1041
                     /gene="LOC139904506"
                     /note="bidirectional sugar transporter SWEET14-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 43 Proteins"
                     /db_xref="GeneID:139904506"
     CDS             92..946
                     /gene="LOC139904506"
                     /codon_start=1
                     /product="bidirectional sugar transporter SWEET14-like"
                     /protein_id="XP_071742524.1"
                     /db_xref="GeneID:139904506"
                     /translation="MMMIAGQFPHLTLAFGLMGNIVSFMVFLSPLPTFYKVYKKKSTE
                     GFQSIPYVVGLFSAMLWIYYALLKGNAMLLITINSVGIVIQTFYLCVFVLYAPKKARI
                     ESLKLITLFIIVGFGLIVLLTEFLAKGAKRGVIVGWICLIFSLCVFVAPLGVVRQVIK
                     TKSVEYMPILLSLALTLSAVMWFFYGLLLGDFNIAIPNTLGFTFGVLQIILYFVYKNK
                     KPIIDDKITEFKERMSSMDEPRVPDIKDRTSIDMVKLNALVRSENVPNSHFVRSPIVT
                     NHTIEVAA"
     misc_feature    134..391
                     /gene="LOC139904506"
                     /note="Sugar efflux transporter for intercellular
                     exchange; Region: MtN3_slv; pfam03083"
                     /db_xref="CDD:397278"
     misc_feature    491..748
                     /gene="LOC139904506"
                     /note="Sugar efflux transporter for intercellular
                     exchange; Region: MtN3_slv; pfam03083"
                     /db_xref="CDD:397278"
     polyA_site      1041
                     /gene="LOC139904506"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaataccaa caaggagcag ctacaaaacc tcaagctagc acttctcttt taactggtgg
       61 tgttgagtgt gtgatttcac ttgattttaa aatgatgatg attgctggtc aatttcctca
      121 ccttactctt gcttttggcc ttatgggcaa tattgtctcc ttcatggtgt ttctttcacc
      181 attgccgacg ttctataaag tttacaagaa gaaatctaca gaggggtttc aatcaatacc
      241 ttacgttgtg ggattgttta gtgctatgct ctggatctac tacgctttgc taaagggtaa
      301 cgcgatgctt ttgatcacca tcaactccgt tggaattgtc atacaaacct tttatctctg
      361 tgtttttgtc ttgtatgcac caaagaaggc taggattgaa agtttgaagt tgatcacctt
      421 gttcataatt gttggattcg gattgattgt tctcttaact gaattccttg caaaaggcgc
      481 taagcgtggt gtgatagtcg gatggatctg cctcatattt tcattgtgcg tatttgtcgc
      541 acctttagga gtcgtgagac aagtgatcaa gacaaaaagt gtcgaataca tgcctatact
      601 tctgtcgctc gctctcacac ttagcgcagt gatgtggttc ttctacggtc tacttcttgg
      661 agatttcaac atcgcaatac caaatacgct tggattcacc tttggtgtac ttcagattat
      721 actttacttc gtgtacaaga acaagaaacc gatcatcgat gataaaatca ccgaatttaa
      781 agagagaatg agttcaatgg acgaaccgag agtccctgac ataaaagatc gaacctcaat
      841 tgatatggtg aagctaaacg cgctcgtacg ctcagaaaat gttccaaatt cccactttgt
      901 tcgtagtcca attgttacta atcataccat tgaagttgca gcttgagatt gatcctaaat
      961 aattttggta tgatgtcaag tgtactcttc cctataaata atcgtacact tctaattaat
     1021 cacaagtttt atcttagttt c
//
LOCUS       XR_011778845             333 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904507), ncRNA.
ACCESSION   XR_011778845
VERSION     XR_011778845.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..333
                     /gene="LOC139904507"
                     /note="uncharacterized LOC139904507; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904507"
     ncRNA           1..333
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904507"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904507"
ORIGIN      
        1 ttataatgtc ccaaatttga tttctaaaag gaaattcagc caatgagtta atcacattct
       61 gtagcttgtc aggatcaaga attcttcatg ttttgcaacc tcatactcat taaagatttt
      121 aacagctttt gctttgatat ctgcattatg aggatcacct tccatttgac cttgaataac
      181 cttaagatcc ctttttaggg atttaaccct atcaaagagt attgcagggc tatgatcaga
      241 aatgacataa ggcaaaaaga taccatgagc ttgaggaatg gaattaatca caacatcatt
      301 aaccataatt ctgcccaatt tcttcaatgt gcc
//
LOCUS       XM_071886424            1485 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides germacrene A
            hydroxylase-like (LOC139904508), mRNA.
ACCESSION   XM_071886424
VERSION     XM_071886424.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1485
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1485
                     /gene="LOC139904508"
                     /note="germacrene A hydroxylase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904508"
     CDS             1..1485
                     /gene="LOC139904508"
                     /codon_start=1
                     /product="germacrene A hydroxylase-like"
                     /protein_id="XP_071742525.1"
                     /db_xref="GeneID:139904508"
                     /translation="MELQIILSILFSFVALFYLYTKFKKSSIENLPPQPWKLPFIGHL
                     HHLHGALPHRAFGRLADKIGPVIHLQLGEVSTVVISSPVFAKEVMKTHDLTFANRSKL
                     LAAEVIAYDYKDIIFAPYGEYWRQMRKICILELSSAKKVRSFESIRDEESWNLIESIK
                     GSNMVDLTKMIDTMMNVIAVKVAVGSKCRDQDDLLALIKDIASLSSGFDVSDLFPSVK
                     VLPLVTGSMKKMTMIRNKIDKLLDSIISDHQERRTDGLSDHNEDLLEVLLRLKDDGGL
                     RFPLTSDHIKAILVDIFAAGTDTAAVTIEWAMLELMKNPNIMEKVQAELRLVLKGKNK
                     IYESDIQELEYFKLVIKETLRLHPPLPLLVPRECKVKCEIGVYQIPANTKVIINVWKI
                     GRDPDYWVDPESFIPERFNESSVNMMGTDFEFLPFGAGRRMCPGMNLGLANIELPLAR
                     LLYHFNWGLPNGVSSEDLDMSETLAATLNLKHHLHLVPSAYNTN"
     misc_feature    184..1452
                     /gene="LOC139904508"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; Region: CYP71-like; cd11072"
                     /db_xref="CDD:410695"
     misc_feature    order(295..297,370..372,382..384,406..408,535..537,
                     874..876,883..888,895..900,1075..1077,1087..1092,
                     1096..1098,1276..1287,1294..1308,1315..1320)
                     /gene="LOC139904508"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410695"
     misc_feature    order(601..603,613..615,688..690,871..873,880..885,
                     1090..1092)
                     /gene="LOC139904508"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410695"
ORIGIN      
        1 atggagcttc agattatact gtcgatccta ttttcctttg ttgccttatt ctacttgtac
       61 accaaattca aaaaatcctc cattgagaac cttcctccac aaccatggaa gctccctttt
      121 attgggcact tgcaccatct ccatggtgca ctcccacacc gagctttcgg tcgattagct
      181 gataaaatcg gaccagtaat tcatctacag cttggtgaag tatccacagt cgtaatctca
      241 tctcctgttt tcgccaaaga agtcatgaaa acccacgatc ttactttcgc aaatagatca
      301 aagcttctcg ctgctgaggt catcgcatat gactataaag acatcatctt tgcaccttat
      361 ggcgagtact ggagacaaat gcgtaaaata tgcattttgg agctttcaag tgctaaaaaa
      421 gttcgatctt ttgaatctat acgtgacgaa gagtcttgga accttatcga atccatcaag
      481 ggatcaaaca tggtcgatct tacaaagatg atagacacga tgatgaatgt tatcgcggtt
      541 aaagttgctg ttggaagtaa atgcagggat caggatgatc ttcttgcatt gattaaagat
      601 attgcatctt tatcgagtgg tttcgatgtg tctgatttgt ttccatctgt taaagtattg
      661 cctttagtta caggttcaat gaaaaagatg acaatgatac gcaacaagat cgataagctt
      721 ttggacagca ttatttcgga ccaccaagaa cgccgtacag atggactgag tgatcacaat
      781 gaagaccttc ttgaagtttt attgagactt aaagatgatg gtgggcttcg cttcccatta
      841 acttctgacc acatcaaagc gattctcgtg gatatatttg ccgcgggcac agatacagcc
      901 gcggtgacaa tcgaatgggc gatgttggaa ctaatgaaaa atccgaacat aatggaaaaa
      961 gtacaagccg aactcagatt agtacttaag ggaaagaata agatatacga gtctgatatt
     1021 caagaactcg agtactttaa attagtaatc aaagaaacct taaggttgca ccctccgctt
     1081 ccattgttag ttcctagaga atgtaaggtg aagtgtgaaa ttggtgtata ccaaatccct
     1141 gccaatacga aagttattat taatgtgtgg aaaattggac gtgatccaga ttactgggtt
     1201 gatcctgaaa gtttcatacc ggaaaggttt aatgaaagtt cggttaacat gatgggaaca
     1261 gattttgaat ttcttccgtt tggggccgga agaagaatgt gtcccggtat gaatttgggg
     1321 ttggctaaca tcgagcttcc tcttgcaagg ctactctacc acttcaactg gggactcccg
     1381 aatggggtat catcggaaga tcttgatatg agtgagacgc ttgctgccac gcttaatcta
     1441 aaacaccact tgcatctagt tccaagcgct tataatacaa attaa
//
LOCUS       XM_071886425             696 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SOB FIVE-LIKE 5-like
            (LOC139904509), mRNA.
ACCESSION   XM_071886425
VERSION     XM_071886425.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..696
                     /gene="LOC139904509"
                     /note="protein SOB FIVE-LIKE 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904509"
     CDS             30..506
                     /gene="LOC139904509"
                     /codon_start=1
                     /product="protein SOB FIVE-LIKE 5-like"
                     /protein_id="XP_071742526.1"
                     /db_xref="GeneID:139904509"
                     /translation="MELDFGSECSSGCESGWTFYLGHSMYRSDLVEKYKYTDKEDDDD
                     DDMSMVSDASSGPPHVVQDQEQEQEFSKHNNGVFNGWKKEKIFITKGRKTQDLTCFLD
                     ETASSSFFNFSHAGNNQASLGESSKVIADDSKEHFQGESSFQDQFGGFKSCVSSTR"
ORIGIN      
        1 acaaatttca tagcttttca acaaaaaaca tggaactaga ttttggttca gaatgcagca
       61 gtgggtgtga atctggttgg actttctact taggacattc gatgtatcgt agcgatttag
      121 ttgaaaaata caaatatact gataaagaag atgatgatga tgatgatatg tcaatggttt
      181 cagatgcatc ttcaggtcca ccacatgtag ttcaagatca agaacaagaa caagaattca
      241 gcaagcataa taatggcgtt tttaatggct ggaaaaaaga aaagattttt atcacaaaag
      301 gaagaaagac tcaagatttg acttgttttc ttgatgaaac agctagttct tctttcttca
      361 acttctctca tgcaggaaat aaccaagctt cattggggga gagtagtaag gtaattgcag
      421 atgattcaaa agagcatttt cagggtgaat caagcttcca agatcaattt ggaggtttta
      481 aatcttgtgt ctctagtact cgataaaaca aaatcaatga tatgaaagca ggtggggatg
      541 agtagtcact aatggccaaa acatacttga tcagaaaagt atgtgaagac aaataagcat
      601 atattttgca tcatattttg tggggaaaat attgtatcaa ctatttgact agttagtaga
      661 aacgaggtag gaagtaccga agtagtagta actagg
//
LOCUS       XM_071886426            1959 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter G family
            member 23 (LOC139904510), mRNA.
ACCESSION   XM_071886426
VERSION     XM_071886426.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1959
                     /gene="LOC139904510"
                     /note="ABC transporter G family member 23; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139904510"
     CDS             1..1959
                     /gene="LOC139904510"
                     /codon_start=1
                     /product="ABC transporter G family member 23"
                     /protein_id="XP_071742527.1"
                     /db_xref="GeneID:139904510"
                     /translation="MASCFHPTSAEDDSAALFTASDNSPAQSTSPSSSSHHSLPPPYT
                     SKPSYKLTIKNLSYTIKTSTDFSLSWLINKPKHINILKSVSFVAQSSEIMAIVGPSGS
                     GKSSLLHFVSGRVRNNTLDPKTTISLNDYPITSPSQMKKICGLVAQEDNLLPLLTVKE
                     TLMYSAKFRLKDTSSKEKEERVECLMRELGLVHVRDSFVGDEDDRGISGGERKRVSIG
                     VDMIPDPPILLLDEPTSGLDSSSALQVIELLSNMASSKQRTIILSIHQPSYRVLQYIS
                     NFLILSNGSVIHNGSLESLEETINQLGFEIPTQLNALEFSMEIKEVLETSYNSKDPVI
                     TFRELMEPSFATVWAEQTHGTFQELLRRDQNMDRTRYKHGLYEILVLCTRFWKSIYRT
                     KQLFLARTMQAIVGGLGLGSVYVNIKNNENGIAERLGLFAFSLSFLLSSTVEALPIYL
                     QERRVLMKEASRGAYKTSSYMIANTIVFLPFLFVVGLLFSIPVYWLVGLNPSFTAFAF
                     FVFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKELIPKYWM
                     FMYYVSLYRYPLDSWLVNEYWERMDVCFSGESYGSKCMVTGKDILNGRGLSFDTRWMN
                     VGIMFGFFVFYRVLCWIILARKVSRTTI"
     misc_feature    238..1947
                     /gene="LOC139904510"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; Region: 3a01204; TIGR00955"
                     /db_xref="CDD:273361"
ORIGIN      
        1 atggcttctt gtttccaccc tacttccgct gaagacgact ctgccgccct tttcaccgcc
       61 tccgataact caccggccca atccactagc ccatcctcct cctcccacca ctccttacca
      121 ccaccttaca cctcaaaacc atcttacaag ctcactatca aaaacctctc atacaccatc
      181 aaaacaagca cggatttttc actttcatgg ctcataaaca aaccaaaaca tattaatatt
      241 ctaaagtccg tatcttttgt cgcacaaagc tcggagatca tggcgattgt tggcccgagt
      301 gggagtggga agtcaagttt gcttcatttt gtatcgggcc gtgttagaaa caacacattg
      361 gatccaaaaa ctactatctc actcaacgat tacccgatca cgagtccgtc acaaatgaaa
      421 aaaatatgtg ggcttgtggc ccaagaagat aacttgcttc cattgttaac tgtgaaggaa
      481 actttgatgt atagtgctaa gtttaggcta aaagacacga gttcaaaaga gaaagaagag
      541 agagtcgagt gtttaatgcg cgaactcggg ttggttcatg ttcgtgatag ttttgttgga
      601 gatgaagacg atagagggat atccggtgga gaaaggaaac gggtatcgat tggtgtcgat
      661 atgatccctg acccacccat tttactcctc gacgagccta catcagggtt agatagtagc
      721 tcggctcttc aagtgattga gttactatca aacatggcta gttcaaagca acgaaccatc
      781 attttatcta tccaccaacc gagttatcga gtcctccaat acatttctaa cttcttaatc
      841 ctttcaaacg gttcagtaat ccataacggg tcactagagt cactcgagga aaccattaat
      901 cagctgggat tcgaaatccc aacacaacta aatgcactcg agttttcaat ggaaatcaag
      961 gaggttcttg aaacgtcata taactcgaaa gatcccgtta ttacatttag agaacttatg
     1021 gaaccatctt tcgcaacagt atgggctgaa caaacacacg gaacgtttca agagctttta
     1081 agacgagatc aaaacatgga tagaactcga tataaacatg gtttatacga aattctagtt
     1141 ctttgcacac gattttggaa atcaatttac aggactaaac aattgttctt agcaagaacg
     1201 atgcaagcga ttgttggagg actcggttta gggagtgttt atgtaaatat caagaataac
     1261 gaaaacggga ttgcagaaag attaggcctt ttcgctttta gtcttagttt tcttctttct
     1321 tcaacggttg aagcacttcc tatatacctt caagaacgtc gggtcttgat gaaagaagca
     1381 tcaagaggtg catacaaaac gtcttcttat atgatcgcta acactattgt gttcctaccg
     1441 tttctttttg tggttgggct tcttttttct attccggtct actggctagt cgggctgaac
     1501 ccatcgttca ctgcattcgc ctttttcgtt ttcgttgttt ggctcatcgt actaatggct
     1561 agctcgttgg ttctgttcct aagtgcggtt tctcctgatt ttatatcggg aaattcactc
     1621 atttgcacgg ttcttggtgc atttttcctc ttttcgggct actttatacc aaaagaattg
     1681 atacccaaat actggatgtt catgtactac gtgtcgttat atcgataccc gttagattca
     1741 tggttggtta atgagtattg ggaaagaatg gatgtttgtt tttctgggga gagttatggg
     1801 tctaaatgta tggttactgg gaaggatata ttgaatggta gagggcttag ttttgacact
     1861 agatggatga atgttgggat catgtttggt ttctttgtgt tttatagagt tctttgttgg
     1921 atcattcttg caagaaaggt ctctagaaca acaatatga
//
LOCUS       XR_011778846             454 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904511), ncRNA.
ACCESSION   XR_011778846
VERSION     XR_011778846.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..454
                     /gene="LOC139904511"
                     /note="uncharacterized LOC139904511; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904511"
     ncRNA           1..454
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904511"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904511"
ORIGIN      
        1 cttgttacta gctcggtttt ggagttgagg taaaagcttg ctcggttgcg tttggaggcg
       61 gtttacatat atgatttgtg cgggcatctc gaggtatcgt gttatgaagc tagttagtcg
      121 ttagactaga tgtgtaggag cgctggggct cgacggggta gctattggat atttgaacgc
      181 ggtttgggga tttggtagtc cccgggatta tgctcttggt atcgggttgg gttatagagt
      241 cctaactcgt ctaaatgtag attgggttga acttgtaatt ttgtacttaa tgataatttg
      301 ggcatatgtg ggcccggtgt cgtaaaactc gttttattat tggaacgtgt tagttttact
      361 tattgtaata tgtcgtgaaa gccgttttgt caaatagtgt cgggtagtgg tagatctttt
      421 tgcgtaaaat gaacattttg atcagaactg tcca
//
LOCUS       XM_071886427             651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CASP-like protein 3A1
            (LOC139904512), mRNA.
ACCESSION   XM_071886427
VERSION     XM_071886427.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139904512"
                     /note="CASP-like protein 3A1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139904512"
     CDS             1..651
                     /gene="LOC139904512"
                     /codon_start=1
                     /product="CASP-like protein 3A1"
                     /protein_id="XP_071742528.1"
                     /db_xref="GeneID:139904512"
                     /translation="MSTDHKPPPLETTVQLNDHDTTPIKVAAEVETGTMNGRTVTSTK
                     KFSLNYDMVFIILRFVSLAASLISVFVMISAQEKSSILIYGFNLPLYSKWSFSGSFQY
                     LVGVSSVVGVHSLVQLVMTVSRTLRKTSVFSSRNHAWLILIVDQVFAYVTVSAGSAAT
                     GVTNLNRTGIQHAPLPNFCKPLHHFCDRVGVSIAFAFFNCVLLAVSALLDVIWLSN"
     misc_feature    166..606
                     /gene="LOC139904512"
                     /note="Casparian strip membrane protein domain; Region:
                     CASP_dom; pfam04535"
                     /db_xref="CDD:367980"
ORIGIN      
        1 atgtcaactg atcacaaacc accaccactt gaaaccaccg tacaactaaa cgatcacgat
       61 accaccccca tcaaagttgc tgccgaggtc gaaaccggca ccatgaatgg acgtacggtc
      121 acatcaacca aaaagttttc actaaactat gacatggtgt tcatcatttt acgctttgtt
      181 tccttagcgg cttccttaat atcagttttt gtcatgattt cggctcaaga aaaatcgagc
      241 atcttgatct atggatttaa tttacctctt tactccaagt ggtccttctc cggatccttt
      301 cagtatttag ttggagtttc ttcggttgtg ggagtccatt cgcttgttca gttagtgatg
      361 acggtttcaa gaacacttag aaaaacatcg gtcttttcgt ctaggaatca tgcatggctt
      421 attcttattg ttgatcaggt gtttgcgtat gtgactgtaa gtgctggatc agctgcaaca
      481 ggtgtgacta atttaaaccg aacagggatt cagcatgcac ctctacccaa tttctgtaag
      541 ccgttacatc acttttgtga tcgtgttgga gtttcaattg cttttgcgtt cttcaactgc
      601 gtattacttg ctgtatctgc gcttcttgat gtaatttggt tatctaatta g
//
LOCUS       XM_071886428             744 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides high mobility group B
            protein 4-like (LOC139904513), mRNA.
ACCESSION   XM_071886428
VERSION     XM_071886428.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..744
                     /gene="LOC139904513"
                     /note="high mobility group B protein 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904513"
     CDS             56..484
                     /gene="LOC139904513"
                     /codon_start=1
                     /product="high mobility group B protein 4-like"
                     /protein_id="XP_071742529.1"
                     /db_xref="GeneID:139904513"
                     /translation="MRGPKSTATIAQKKLHPETTKKTKADKSTSKKGKSEKKNSGVPK
                     RPPTAFFVFMEEFRKDFKENFPDNKSVSVVAKEGGVKWKAMSESERAPYVAKAATKKA
                     EYGIAMKQHNDDLNSKEKSSSASKSSVDTNDDAEQEASST"
     misc_feature    185..367
                     /gene="LOC139904513"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 1 (HMGB1) and
                     similar proteins; Region: HMG-box_AtHMGB1-like; cd22005"
                     /db_xref="CDD:438821"
     misc_feature    order(185..190,194..208,215..220,239..241,278..283,
                     290..292,299..304,323..325,335..337,344..346,356..358,
                     365..367)
                     /gene="LOC139904513"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:438821"
ORIGIN      
        1 ccaattttca cacacaaata ctcatcaaat ctcagagcga atcgtgaagg cgaaaatgag
       61 aggaccgaaa agcaccgcta ccattgctca gaagaagctg catccggaaa caacgaagaa
      121 gacgaaggct gataagagta cgtcaaagaa gggcaaatcg gagaagaaaa actctggtgt
      181 tccaaagcga cctccgacgg cgttcttcgt cttcatggag gaattcagga aggattttaa
      241 ggagaatttt cctgacaaca aatcagtctc tgttgttgca aaggaaggtg gagttaagtg
      301 gaaggccatg tctgaatctg agagagctcc ttatgtggcc aaggctgcaa caaagaaggc
      361 agagtatggc attgctatga aacagcacaa tgatgatctt aattcaaagg agaagtcttc
      421 atcagcgtcc aaatcatctg tggacactaa tgatgatgcg gagcaagaag ctagtagcac
      481 ttagattgat gaggcttatg tgctaaccaa accacctgaa gagagtagga gtaaatcgga
      541 tactgttatg gtagaataaa acactattta gtgttattag taatattcaa taattagttt
      601 tcttatgaat attcagtaat tagatttgag tagtatctgt cttctgcgtg gttggtactg
      661 ttggaatcct taatgcttta tagcggtagt agagtaaaaa gcagtgttac ttagcttatg
      721 aatttcacgt tttactttct gttc
//
LOCUS       XR_011778847             596 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904514), ncRNA.
ACCESSION   XR_011778847
VERSION     XR_011778847.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..596
                     /gene="LOC139904514"
                     /note="uncharacterized LOC139904514; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904514"
     ncRNA           1..596
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904514"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904514"
ORIGIN      
        1 tgatccagta atgtgaaaag agaataaagc aggaaaagtg ccaaacttta atctcactaa
       61 agctatatga aaatgtaagg actttggtga tacatgcaca ttagtacatt acattatttc
      121 gtagcagtgt tcttccaaca tgaacagccg cagcaaccgt ctcttggact tgtactcttg
      181 cacttgttct tccagcatga acaaccgcag caaccgtctc ttgcactcta catttggtga
      241 agtagctcta atgggtactt ttggattatg agagtatgtt cctcactttc ctttagctag
      301 ggttatatcc caaccttcaa tgcaaaacct aggaagcaac tgatgcacac ctgaggcgaa
      361 attctaccag ccagtcatcg atagcaactg atccaatact aatgggacat gctcaaatca
      421 aaggcctgga aaagttcagg cgagaaatat acgagtaaac ctatattata gggatcatga
      481 ttttataccc aaatcaaaag aagaacaaag taataatgat ggccaaaact ctcatgaaat
      541 aaagagagga tcgagactag agaatttgga caagttttct gataataatt tttcaa
//
LOCUS       XM_071886429            2306 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RAP domain-containing
            protein, chloroplastic (LOC139904515), mRNA.
ACCESSION   XM_071886429
VERSION     XM_071886429.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2306
                     /gene="LOC139904515"
                     /note="RAP domain-containing protein, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins"
                     /db_xref="GeneID:139904515"
     CDS             177..2135
                     /gene="LOC139904515"
                     /codon_start=1
                     /product="RAP domain-containing protein, chloroplastic"
                     /protein_id="XP_071742530.1"
                     /db_xref="GeneID:139904515"
                     /translation="MLSATSSSVTQFKHSPLSFPSPRNSIFCVGVSINKEFRVIKIVD
                     DEEKVKEEEPKDSNLDWKDEFLGENDDIRLTGGYSNKKKEKEKSDLLQETDSTDWCVR
                     ARKSALRSIQTRGLTSAMEDLVTINRKKKKKNKKKNIEVVNKGKTVKKAAKKDSDLDS
                     DSDGEQIDELDIENLLDDDQLKANVSMLAGGMFMELKEKNRETFVKRLSQFSGQSQTS
                     DRRKEINLNREIVEAQTSDQVLEIVSDMILAVGKGLSPSPLSPLNLATAIHRIAKNME
                     KVSMTKSLRLAFARRREMCMLVGMAMMALPECSAQGVSNIAWALSKIGGELLYLSEMD
                     RVAEVALTKVDEFNSQNVANIAGAFASMQHAAPELFAELSERASVIVDTFQPQELAQL
                     LWAHASLFEPADLLFASLDDVYNNARQYTCNSLDKKGLILNETVTESVEALKAESFPV
                     LDFNRDQLGNICWSCAVLGQINRTFFFHVWETLSRFEEQLISEQYRENIMFATQVQLV
                     NQCLKLEYPDLSLSLRSDIEEKIIRAGRTSRFNQKITSAFQKEVSRLLVGTGLDWTKE
                     YVVDGYTLDAALVDIRVALEIDGPTHFSRNLGNPLGHTVLKRRYLEAAGWKLVSVSHQ
                     KWEELRGSHEQLDYLREIIQPVMKLQEL"
     misc_feature    <1065..1367
                     /gene="LOC139904515"
                     /note="RNA-editing substrate-binding complex subunit 6
                     (RESC6) and related proteins; Region: RESC6-like; cl46254"
                     /db_xref="CDD:480594"
     misc_feature    1929..2102
                     /gene="LOC139904515"
                     /note="RAP domain; Region: RAP; pfam08373"
                     /db_xref="CDD:429953"
     polyA_site      2306
                     /gene="LOC139904515"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctaaaaaaga aaatttggag acatccccat ttcatgataa catgttgata atcaacgaac
       61 cgataaagca acagcagagg atagtagcaa cagcttactg acgcatattc tcaatctctt
      121 cccggtcggt cggtctgtct ctttaacatt ttagctactt catctgcaca ttcttaatgt
      181 tatcagcaac atcatcatcc gtcacacaat tcaagcattc gcctttatct ttccctagcc
      241 ctagaaactc aatcttttgt gttggtgtta gtataaacaa agaatttcgt gttataaaaa
      301 tcgtcgatga tgaagaaaaa gtaaaagaag aggaacctaa agattccaat cttgattgga
      361 aagatgagtt tttaggagag aatgatgata ttcgtttgac gggtggttat tcgaataaga
      421 aaaaagaaaa ggaaaaatcc gatttgctac aagaaaccga ctcaacggat tggtgtgtac
      481 gtgctaggaa gtccgccctt aggtctattc aaacccgagg tttgactagt gcgatggaag
      541 atctcgtcac tattaatcgt aagaaaaaga agaagaataa aaagaagaac attgaggttg
      601 ttaacaaggg taaaacggtc aaaaaggcgg ccaagaaaga ttcggatttg gattcggatt
      661 ctgatggaga acaaatagat gaacttgata ttgaaaacct tttagatgat gaccaactta
      721 aagctaatgt aagtatgtta gcgggcggga tgtttatgga actaaaggaa aaaaatcggg
      781 aaacttttgt aaaaaggtta tctcaattct cgggtcaaag tcaaacgtct gatcgtagaa
      841 aggagattaa tttaaacaga gaaatagtgg aagcacaaac atcagatcaa gtattagaga
      901 tcgtttccga tatgatattg gcggttggga aaggtttgag tccttcacct ttatctccgt
      961 taaatctcgc tactgcaatt catcgtatcg caaaaaatat ggaaaaagtc tcgatgacga
     1021 aaagtttgag gcttgcgttt gcgagacgta gagaaatgtg tatgctagtt ggtatggcca
     1081 tgatggcgct tccggaatgt tccgctcaag gtgtctcgaa tatcgcgtgg gccctgtcca
     1141 agatcggagg cgagcttctt tatttgtctg agatggatag agtggcggaa gtagcgttga
     1201 ccaaagttga cgagtttaat tcgcaaaatg ttgcaaacat tgccggtgcg tttgcgtcta
     1261 tgcaacatgc tgctccagag ctgtttgcag agctatcgga aagagcttcg gttattgtgg
     1321 atacttttca gccacaagaa cttgctcagc tgctgtgggc ccacgcatca ctattcgagc
     1381 ctgcagactt gttattcgca tctcttgatg acgtttacaa caatgcccgt caatatacgt
     1441 gcaacagttt ggacaagaaa ggtttgattc ttaacgaaac agttacagaa agcgtcgagg
     1501 ctttaaaagc tgaaagcttt cctgttcttg atttcaaccg agatcaactc ggaaacatat
     1561 gttggtcgtg tgcggttcta gggcaaatta atcgtacctt tttcttccat gtatgggaaa
     1621 cgttgagtcg ttttgaggag cagcttatat ctgagcagta cagggaaaat ataatgtttg
     1681 ctactcaagt tcagttagtt aaccagtgtt taaaactcga gtacccggat ctgtcattat
     1741 ctcttagaag tgatattgag gagaaaataa ttcgtgcggg aagaacttca cgattcaatc
     1801 aaaagattac gtctgcgttt cagaaggaag taagtcggct tcttgttgga acgggtcttg
     1861 attggacgaa agaatacgtt gttgatgggt acacgttgga tgctgctttg gttgatataa
     1921 gagttgcatt ggagattgat ggaccgactc atttttcaag aaatttagga aaccctttag
     1981 gacatacggt gttgaaaagg cgctaccttg aagctgctgg ttggaaactt gtatcagtat
     2041 ctcaccaaaa atgggaagaa ctcagaggga gtcatgaaca actagactac ctaagagaaa
     2101 ttattcaacc agtaatgaag ctgcaagagc tgtgatgatg ggtggtttcg atgttgtaaa
     2161 gacatgagtt gaataggaaa aacaggtatt ttgtagaaac gaaatgaaac gtttccatgt
     2221 gtaatcattt tggcaagttt taccgctaga ttaaaactcc cgatgcaccc gttttgatgt
     2281 atttaataaa cctatagttt tcttaa
//
LOCUS       XM_071886430             945 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rRNA-processing protein
            fcf2-like (LOC139904516), mRNA.
ACCESSION   XM_071886430
VERSION     XM_071886430.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..945
                     /gene="LOC139904516"
                     /note="rRNA-processing protein fcf2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904516"
     CDS             171..743
                     /gene="LOC139904516"
                     /codon_start=1
                     /product="rRNA-processing protein fcf2-like"
                     /protein_id="XP_071742531.1"
                     /db_xref="GeneID:139904516"
                     /translation="MQVIGLSWEPKLPSLNFSTKNGSNAKSRDVSESNLVYKPTSELI
                     DGLFVPPNDPKKVNKFLKKQVKDTAGKGWFDMPAPTLTPELKKDLQLLKLRNVMDPKR
                     HYKKGDSKLPKYFQVGTVVEHATEYYTSRLTKKERKSTLADELLSNESLKAYRKRKVQ
                     EIEAKNQPGGVDKWKIKGKSSWKRAKQRRH"
     misc_feature    369..644
                     /gene="LOC139904516"
                     /note="Fcf2 pre-rRNA processing; Region: Fcf2; pfam08698"
                     /db_xref="CDD:462566"
     polyA_site      945
                     /gene="LOC139904516"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accaacaccc cccacaaaaa atttaacgaa ccgtcgctta caatcagaac aacggtgcgt
       61 ttgtctcctc gattcaactc ttattattca cgttttcagt tcttcacgcc cagccgtctc
      121 catcttcctc atcaccgcgc catcgttatt gttcttgttt cagggaaaaa atgcaagtga
      181 ttggtctgtc atgggaacca aaactacctt ctctaaactt cagtacaaaa aatgggtcca
      241 atgcaaagtc tcgagatgta tcagaaagta atctagtcta taaacccacc tcggagctca
      301 ttgatgggtt gttcgttcca cctaacgacc caaagaaggt gaacaagttt ctgaagaagc
      361 aagtcaaaga cacagcaggg aagggttggt ttgatatgcc tgcacctaca ctcacacctg
      421 agttgaaaaa agatcttcag ctgctaaagt tgcgaaacgt aatggatcca aagaggcact
      481 acaagaaggg tgacagtaag ttaccaaaat atttccaggt cgggacggtt gtggagcacg
      541 caacggaata ttatacaagt aggcttacaa agaaagaaag aaagtcaact cttgcagatg
      601 aactgctctc taatgaatca ctcaaggctt acaggaagcg caaggttcaa gagattgaag
      661 cgaaaaacca accgggtgga gttgataaat ggaagatcaa aggtaaaagc tcgtggaaac
      721 gtgcaaaaca aaggagacac tgaagtgagc cttaaatcgg ggattttgtc agtcgcttgc
      781 tttgaagttt tgatcaccag tacttttgta atttcgagaa atgtttgttg gattagatag
      841 attcaaaaaa agatggattc atatttctgg ttttgtgtta tgatgctagt atgcaataca
      901 ttaggtgtag gttggatctt gcttataatt taattatttt aaata
//
LOCUS       XM_071886431            3733 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine-specific demethylase
            JMJ705 (LOC139904517), mRNA.
ACCESSION   XM_071886431
VERSION     XM_071886431.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3733
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3733
                     /gene="LOC139904517"
                     /note="lysine-specific demethylase JMJ705; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139904517"
     CDS             85..3504
                     /gene="LOC139904517"
                     /codon_start=1
                     /product="lysine-specific demethylase JMJ705"
                     /protein_id="XP_071742532.1"
                     /db_xref="GeneID:139904517"
                     /translation="MSEEVFPWLKSLPVAPEYHPTLTEFQDPISYIYKIEKEASKYGI
                     CKIIPPVSSSPKKAVLANLNRSLSARNPNSSPTFTTRQQQIGFCPRKHHRPVQKPVWQ
                     SGEVYTVQQFEAKAKNFENSYLRKQSNSKKGGLGLSALEVETLYWKAQVDKPISVEYA
                     NDMPGSAFDQTGGVQGKRSGKREIGEGVTVGETEWNMRGVSRSKGSLLKFMKEEIPGV
                     TSPMVYISMLFSWFAWHVEDHDFHSLNYMHMGAGKTWYGVPKDAAVAFEDVIRVHGYG
                     GEINPIVTFGTLGEKTTVISPEVLLKAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFN
                     CGEAANIATPGWLTVAVDAAIRRASINCAPMVSHSQLLYDLAISFISSSEPTSIKPEP
                     RSSRLKDKLKVEGDALVKRCFVQDIMQNNHLFHILGKGSSIVVLPEEYLDRRIPFGLT
                     TQIDGLKSTHSSDFDDDVIPDKRQIRKYSSFCSSSNGISSIGGEDTSYKNGQPDKKAD
                     PGIFSCVTCGILCYACVAIIRPTEAAGNYLMSADCDGISDLVSATNLFTSDEGPSVLD
                     PKSSSGKMAKSNRDGLFDVPVKSNDQMHPVDNMSVTSLTAPQKVSSSLGLLAQAYGGD
                     SSDSEDDHRDENIDRSFEDHGDMKYTNDQTSEYSAEFEETINLRDSNYSRSKYQYEIE
                     SSHAELDPLLDAPEDETTATYTTCDEDSSRKHIFCLQHALEVEQRLGAVGGVHVLLLC
                     HQDYPCLDSEAKLMAKESGTGDSWTDLEYRPSNANDKKWIQTALDSEQAIHGNRDWAV
                     KLGINLFYSATLSRSPLYTKQLPYNLVIYNAFGYISPSTNPTKPKLSGRQKKIVVAGK
                     WCGKVWMSNQAHPLLVPRDDVEQCDTGVSLSNVKQERRCDTTRVVVSKNVRKRKYTKE
                     NRRVSLRTKFPKVEPSSPSLDTSLSSGFRTQPRTNLKNKARQYEDSEGESGGGGGPSS
                     RLRKRIIKPTSKEFGEVIEPKPKLRKHKDLRKVKKVSVVKVNEEDEGEFGCDMEGCNM
                     SFGSKQELMIHKKNICPVQGCGKKFFSHKYLVQHRRVHMDDRPLQCPWKGCKMTFKWA
                     WARTEHIRVHTGARPYVCTENGCGQTFRFVSDFSRHKRKTGHSAKKHIQET"
     misc_feature    124..249
                     /gene="LOC139904517"
                     /note="Small domain found in the jumonji family of
                     transcription factors; Region: JmjN; smart00545"
                     /db_xref="CDD:128818"
     misc_feature    748..1104
                     /gene="LOC139904517"
                     /note="JmjC domain, hydroxylase; Region: JmjC; pfam02373"
                     /db_xref="CDD:396791"
     misc_feature    3160..3216
                     /gene="LOC139904517"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275368"
     misc_feature    3220..3288
                     /gene="LOC139904517"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275368"
     misc_feature    order(3241..3243,3247..3249,3253..3255,3259..3264,
                     3271..3276,3283..3285,3331..3333,3337..3339,3349..3354,
                     3361..3366,3373..3375,3421..3423,3427..3429,3433..3435,
                     3439..3444,3451..3456)
                     /gene="LOC139904517"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:275368"
     misc_feature    3310..3378
                     /gene="LOC139904517"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275368"
     misc_feature    3400..3462
                     /gene="LOC139904517"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275368"
ORIGIN      
        1 atatccttct ttctctctct gctcaccatg aacctcaatt aacctcctca gatccatcaa
       61 accctaattt ctctgcaagt aataatgagt gaagaagtat ttccatggtt aaaatcacta
      121 ccagtagcac cagagtatca cccaacccta actgaatttc aagatccaat ttcatatatt
      181 tataaaattg aaaaagaagc ttcaaaatat ggaatctgta aaatcattcc tcctgtttca
      241 tcgtcaccaa aaaaagctgt acttgctaac ttaaaccgtt cattatcagc tcgaaaccct
      301 aattcatcac ctacatttac cactagacaa caacagatcg gcttttgtcc acgtaagcat
      361 caccgtccag tccagaagcc ggtctggcaa agcggtgagg tttacactgt tcaacaattt
      421 gaagcaaaag ccaaaaactt tgaaaacagt tacttgcgaa aacagtcgaa ttctaagaaa
      481 ggagggttag ggttaagcgc attggaagtc gaaacacttt actggaaagc gcaggtcgat
      541 aagccgatat cggtcgagta tgcaaacgat atgcccggtt cggcatttga tcaaacaggt
      601 ggtgtgcagg ggaagagatc agggaaaagg gaaattgggg aaggggtaac tgtaggggaa
      661 actgagtgga atatgagagg ggtttcgagg tcgaaaggat cgttattgaa gtttatgaaa
      721 gaggagatac ctggtgttac ttcacctatg gtttatatta gtatgttgtt tagttggttt
      781 gcttggcatg ttgaagatca tgattttcat agcttgaatt atatgcatat gggtgctggt
      841 aagacttggt atggtgtacc taaagatgct gcagttgcgt ttgaggatgt gattcgagta
      901 catggttatg gtggtgagat aaatcctata gtgacttttg gtactcttgg tgagaagacc
      961 actgttatat ctccggaggt attacttaag gcgggagttc cttgctgcag attggtgcaa
     1021 aatgctggag aatttgttgt cactttccct agagcttatc actcagggtt cagtcacgga
     1081 ttcaactgtg gggaggcagc taatattgca acacctggct ggttgacagt tgcagtagat
     1141 gctgcaattc gcagggcgtc aattaattgt gcccccatgg tgtctcactc ccagttactt
     1201 tatgatcttg caatatcatt tatatcctca agtgaaccca caagcatcaa acctgaacct
     1261 aggagttctc gattaaaaga taagttgaaa gttgagggag atgcattggt gaaacgatgt
     1321 tttgtgcaag atataatgca aaacaatcat ctttttcata ttcttggaaa aggatcttca
     1381 attgtagttc ttcctgaaga atacttagac agacggattc ccttcggttt aaccactcaa
     1441 atcgatggat tgaaatccac acatagttca gattttgatg atgatgtcat tccagacaaa
     1501 agacagatca gaaaatattc ttcattttgt agtagcagta atgggatctc gtcgattggc
     1561 ggggaagata cttcgtataa gaatgggcaa cctgataaaa aggcggatcc tggtatattc
     1621 tcttgtgtta cttgtgggat tctgtgttat gcatgtgttg caattattcg accaacagaa
     1681 gccgctggga attatcttat gtcagctgat tgtgatggta ttagtgattt agtttctgcc
     1741 accaatttat tcacttctga tgaaggtcca agtgtcctgg atcctaaatc ctcttcagga
     1801 aaaatggcaa aaagcaatcg tgatggcttg tttgatgtcc ctgttaaatc taatgaccaa
     1861 atgcatcccg ttgataatat gagtgtaact tcactaactg caccacaaaa agtcagttct
     1921 tcccttggcc tcttggctca agcttatggt ggtgattcct cagattctga agatgaccac
     1981 cgcgatgaaa atatcgacag aagttttgag gatcatggtg atatgaagta cacgaatgat
     2041 caaacttctg aatattctgc tgaattcgaa gaaaccataa atctcaggga ctcgaattat
     2101 tcaaggagca aatatcagta tgagatagag tcgtctcatg ctgaactaga ccctttacta
     2161 gacgcacccg aggatgagac gacagcaaca tacacaacat gtgatgaaga ctcttcgaga
     2221 aagcatattt tctgtcttca gcatgcatta gaagtagaac aacgacttgg tgcggttggc
     2281 ggtgttcatg tacttctact ttgtcaccaa gattatccct gcttagattc tgaggcaaaa
     2341 ttaatggcaa aagaatcggg aaccggtgac agctggaccg accttgaata cagacccagt
     2401 aacgcaaacg acaaaaagtg gatacaaacc gctctcgata gtgaacaagc catccatggc
     2461 aatagggact gggccgtaaa actaggaatt aatctcttct atagtgctac ccttagtcgc
     2521 tctcctcttt acaccaaaca attaccctac aatttagtta tttacaacgc gtttggatat
     2581 atttccccgt ctaccaaccc tacaaaacct aagctttcgg gtagacaaaa aaagatcgtt
     2641 gtggcgggaa aatggtgcgg gaaagtatgg atgtcgaatc aagcacatcc gttgttagta
     2701 ccacgcgatg acgtagaaca atgcgacacc ggcgtttcgt tgtcgaatgt aaaacaagaa
     2761 agacgatgtg acaccacccg agtggtcgtt agtaagaacg ttaggaaacg gaaatacacg
     2821 aaagaaaata gacgagtgag tctacgaaca aagttcccga aagtcgagcc gtcatcaccg
     2881 tcactagata catcgttaag tagcggtttc agaactcagc caaggacaaa ccttaaaaat
     2941 aaagcaagac agtacgagga ttctgagggg gagtctggcg gtggcggtgg gcccagttca
     3001 cggttaagaa aaagaattat aaaaccgacg tctaaagaat ttggagaggt gattgaaccg
     3061 aagccgaaac ttagaaagca taaagattta aggaaagtga agaaagtttc tgttgttaaa
     3121 gtaaatgaag aagatgaagg agagtttggt tgtgatatgg aggggtgtaa tatgagtttt
     3181 ggtagtaaac aagaacttat gattcataaa aaaaatattt gtccagttca aggttgtggg
     3241 aagaagtttt tttcgcacaa gtatttggtg caacacaggc gtgtacacat ggacgatcgc
     3301 ccgcttcagt gtccatggaa agggtgtaag atgacgttta agtgggcgtg ggctcggacc
     3361 gaacatatta gggtgcacac aggggcaaga ccttatgttt gtactgagaa tgggtgtggt
     3421 caaacgttca ggttcgtgtc tgattttagc cggcataaaa ggaaaactgg gcattcggcg
     3481 aagaagcata ttcaagaaac gtaaaaagaa ttgttgttag ggatggtaat gttaacacgt
     3541 tgaggtatta aactgtaact gttattttcg atttaattta atttaacaga atgaatgatt
     3601 tagggtttgt agggaggagt accctttttt gtaatttatg ttgattagaa agaggcacag
     3661 tgttttttaa tcactgtaaa agggaaaacc ttcattaaac ttgttacttc agttcaattc
     3721 caagttgtta ttt
//
LOCUS       XR_011778848             495 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904520), ncRNA.
ACCESSION   XR_011778848
VERSION     XR_011778848.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139904520"
                     /note="uncharacterized LOC139904520; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904520"
     ncRNA           1..495
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904520"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904520"
ORIGIN      
        1 ttggtgataa catttgaccc agatttcgac ttgtagataa aacataactt gaatcaattc
       61 aacagatatg taacagagtc taaatagagt gacggtttgg attacagtac ttgaatcaat
      121 tcaacagata tgttatagag atttcaatat aacggtttgg attacagtac ttgatttgaa
      181 ttagattcag tgggtatgat tcttgcatca gagggaacta atgatagtat gttcggaata
      241 ttgcgattaa catattcacc agatatagtc acccataaac cttgaagatg aagaaggtat
      301 ctatcatgaa ctaaaagcag ctctctattt acagtatttg agcgttcgtt gaaattaaat
      361 tgtattgaaa gggaatacaa gattttcttg cagggttcga cctttattgg ttgatgatgc
      421 tgctgacgct gaaacaaagg ttgttacttt tcctacgtca atagaaaatc ttggtcgagg
      481 cgttgaacta atgca
//
LOCUS       XR_011778849             320 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904521), ncRNA.
ACCESSION   XR_011778849
VERSION     XR_011778849.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..320
                     /gene="LOC139904521"
                     /note="uncharacterized LOC139904521; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904521"
     ncRNA           1..320
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904521"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904521"
ORIGIN      
        1 gaaagggtta tactttggtc ggttttatgt ggtcatttaa gatttggatt ctcgaggcat
       61 atcgacgaac aattaaaagt tttgcccaca agacagacaa aaatggagta ccgagggcct
      121 tattttggaa acgttcatcg gctgagactt tttcagtcac tgattacctg catctactaa
      181 acgttatgga tgattgtccg aagaataaac gaccttttcg tactctgcat cccactgatg
      241 ttgagagtgg atgtcaatgg tggttaaaaa gttgccaata ctttgatggg acggaagtgg
      301 atgaggaagt tgaagaacct
//
LOCUS       XR_011778850             677 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904522), ncRNA.
ACCESSION   XR_011778850
VERSION     XR_011778850.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..677
                     /gene="LOC139904522"
                     /note="uncharacterized LOC139904522; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904522"
     ncRNA           1..677
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904522"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904522"
ORIGIN      
        1 actgttggat cgcaaccaaa cgcatattaa atgattgcga attatacagc ttaaaatcaa
       61 aatcctgatt tattacgtat cctgcaaaac tcacacataa gcacaattac tctgcttcct
      121 gttaattcat cgtatacagt catcatcggg aatttcagtt gcgcctcttt gggaccatgc
      181 tgttggtcga tttgtcggaa tacttagccc attagacttc atcttgattc ttagagagct
      241 agggaatcat ggatcggatt tgactgagga agagctcgag acccatgccg tatcagcttg
      301 gaaagaaggg aaattacagc ttatgaggaa attggatggt aatggatcta tgtgtccaag
      361 acgtcttatt gatgctgggc cccacgattc gttgaaagac gttgctctga aactgttgca
      421 acacaaggtt gctaccattc caatcatctc gcacgatggt taagtcccgc agttgctcca
      481 cttggcatcc ctaactggag tactaaaatg tatttgcaga cattttaaac attcacctgc
      541 ttctttgcca gttcttcaac aacccatttg ttcaattcct ttgggcacgt gggtcccgaa
      601 aattggggaa tcgaatggtc ggccgcttgc aatgttgaga gccaatgcct ctctcagcga
      661 tgccttatca ttattag
//
LOCUS       XR_011778851            1026 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904523), ncRNA.
ACCESSION   XR_011778851
VERSION     XR_011778851.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1026
                     /gene="LOC139904523"
                     /note="uncharacterized LOC139904523; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904523"
     ncRNA           1..1026
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904523"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904523"
ORIGIN      
        1 gtagatctga gcaaatggtt cataccggat tacccagacg tgagattttt tcctttatgt
       61 ttatgttatt atattttatt ttaaaaaacc aactaattat attaacttta tatttacagg
      121 gtctgattcc ttgcaatata tcaatgtttc tagccgagga aacaacctat tggtggttag
      181 caagtcggtt gttctttgaa aataaagttt aggttgacgg gtgtcccatt gataagccta
      241 ctaccataca tactgatcct actactccac cccctaatcc ttgtaatgca acctctgaga
      301 ctcctattgc agcctgccat tcttcaatgg gcccaagagt cgtatcgctc gaggaatata
      361 agaagttaca acatgttgtt tttaagttgc aaaaagatgt ggtctagttg aaagtggatt
      421 atatgaagtt agagcgacag gtattcccgg aaatcgaatt caagacattg tagttcatcc
      481 cgtttttcct aatcctgctg gcgaagatga caaagtttct gatttcatca ttgaacatga
      541 tggagttgct gacccgaaac cttccttcaa tgaagagaaa aaaagtcata tgagcgattt
      601 ggatctcaac ctggatttta atgaaagttt agatctgaat ttcttagacg attcacctca
      661 gattcaacaa ggacaagaac aaaatgaaga cgtcaaaaaa tgcggtagca tctttacgtg
      721 tcgcaattac caacgacaaa tgaagattta cttgaagatc caatatatga gtcggtatac
      781 cctttttagg aaaaattggt gagaattgta gtcattgaaa catatatagg tagtattgat
      841 atgaatattt tgttaactaa gtgacatgaa atatatgttt tgtaactact aactaggtag
      901 taggggtgtg cactatttgg tgtcaaaccg aataaatcga atatcgaatt ggtagtatat
      961 aggtagtatt gatatgaata ttttgttaac taagtgacat gaaatatatg ttttgtaact
     1021 actaac
//
LOCUS       XM_071886433            1734 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vignain-like (LOC139904524),
            transcript variant X1, mRNA.
ACCESSION   XM_071886433
VERSION     XM_071886433.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1734
                     /gene="LOC139904524"
                     /note="vignain-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 41 Proteins"
                     /db_xref="GeneID:139904524"
     CDS             433..1506
                     /gene="LOC139904524"
                     /codon_start=1
                     /product="vignain-like isoform X1"
                     /protein_id="XP_071742534.1"
                     /db_xref="GeneID:139904524"
                     /translation="METKIMFILLLLVLVSILGLVDSFEYHEKELESEEGLQGMYDRW
                     RSHHNIAEVSHDDEALRFNVFKSNVHHVHKSNKMDRPYKLKLNKFAAMTNHEFRSTYA
                     GSKISHYRALHGVRKGNLTFMYQNAANIPPSVDWRDHNAVTPPKDQGKCGSCWAFSTV
                     VAVEGINAIKTGQLVSLSEQHLIDCNSVLNNGCDGGLMEPAFEFIKIHGGLATEQNYP
                     YKCQKGICDPSKVGTQVVTIDGFEDVPECNEEALLKAVAHQPVSIAMDANGHDIQFYS
                     QGVFTGQCTTDVNHGVAIVGYGQTPEGMKYWIVKNSWGPKWGEGGFIRIQRGVPDKMG
                     LCGVAVLPSYPLKNSNTPLRTEL"
     misc_feature    553..723
                     /gene="LOC139904524"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     Region: Inhibitor_I29; pfam08246"
                     /db_xref="CDD:462410"
     misc_feature    820..1470
                     /gene="LOC139904524"
                     /note="Papain family cysteine protease; Region:
                     Peptidase_C1; pfam00112"
                     /db_xref="CDD:425470"
     misc_feature    order(874..876,892..894,1300..1302,1363..1365)
                     /gene="LOC139904524"
                     /note="active site"
                     /db_xref="CDD:239068"
     misc_feature    order(1021..1026,1222..1224,1294..1296,1303..1305,
                     1453..1455)
                     /gene="LOC139904524"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     polyA_site      1734
                     /gene="LOC139904524"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtagtaagt ggtctgaaat ccatatagtt tgctctaaag gaacattaca attagcatat
       61 aataacctta ccttctcatt cgataccgaa caatgtgcat ggccaaacta tcattaacat
      121 tcatcaccat ccataacctt tttttttctt ggcaaaaaaa cgaaaaccat ccataccctt
      181 ttgactaaat cccaaattcc ccattaacat ccttaaaata agtgagaaag ggttatattt
      241 tctattcctg gaccccaaaa aaacgcacta taaaaatggt cactatgtct taacctcctc
      301 tgtttatcat agagtgtacc ccttgccccc aagtcaccta ttacatggtc tcattttatt
      361 ttaatgttaa atatgatttc atgtaactaa aataatctct aacatcacaa ttttcaagcc
      421 aaaatccaag aaatggaaac caaaattatg tttattttac ttctacttgt tttggtttca
      481 attctaggcc ttgtggatag ctttgaatac catgagaaag aacttgaatc ggaggaagga
      541 ttgcagggca tgtacgatag atggaggagc caccataaca tagcagaagt aagccatgac
      601 gatgaagctc tgcggttcaa tgtattcaag tccaacgtgc accatgttca caaatcaaac
      661 aagatggaca ggccatataa gttaaagttg aacaagtttg cggctatgac taaccatgag
      721 tttaggagca catacgctgg ctcaaagatt agccattatc gtgcactcca tggagttcgt
      781 aagggcaact tgactttcat gtatcaaaac gccgctaata tccctccttc ggttgattgg
      841 agggatcata acgccgtcac ccctcccaaa gatcaaggca aatgcggaag ttgttgggca
      901 ttttctacgg tggttgcagt cgaaggaata aacgcgatta aaacagggca attagtatca
      961 ttatcagaac agcaccttat cgattgtaat agtgtattaa acaatggatg tgatggggga
     1021 ctaatggaac cggcattcga attcattaaa atccatggag gtctagctac agagcagaac
     1081 tacccttaca aatgtcaaaa agggatctgt gatccgtcta aggtcggcac tcaagttgtg
     1141 acgattgatg gatttgagga tgtacctgag tgcaacgagg aagcattact aaaagcagtt
     1201 gcacaccaac ctgtatctat tgccatggat gctaatggtc acgatattca gttctattca
     1261 cagggagttt ttactggaca atgtacaacg gatgttaatc atggtgtagc gattgtcgga
     1321 tatggtcaaa ctcccgaagg aatgaagtat tggatagtga agaactcgtg ggggcccaaa
     1381 tggggagagg gtggattcat acgaatacaa cgtggtgttc cggataaaat gggactttgc
     1441 ggtgtagcag tgttgccctc ttatcctctt aagaactcga atacgccgct taggactgaa
     1501 ctctaagaag aaaaaaaaca gacaaacaaa ttaggataat gtttatcaat cagcttgttc
     1561 caatataatc tgaattctta taaaattacg gtagtcagat caaatatgta gttgtttaag
     1621 gattgtaatt ttggcggaga ggttcaataa ttttcttgtt attttgttgg accaagattt
     1681 gtatatgaat gctgagtact ctactctagt gaatatgtta ttttgttaga tcaa
//
LOCUS       XM_071886434            1730 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vignain-like (LOC139904524),
            transcript variant X2, mRNA.
ACCESSION   XM_071886434
VERSION     XM_071886434.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1730
                     /gene="LOC139904524"
                     /note="vignain-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 35 Proteins"
                     /db_xref="GeneID:139904524"
     CDS             444..1502
                     /gene="LOC139904524"
                     /codon_start=1
                     /product="vignain-like isoform X2"
                     /protein_id="XP_071742535.1"
                     /db_xref="GeneID:139904524"
                     /translation="MPHRPSGSEVLSKRLVDSFEYHEKELESEEGLQGMYDRWRSHHN
                     IAEVSHDDEALRFNVFKSNVHHVHKSNKMDRPYKLKLNKFAAMTNHEFRSTYAGSKIS
                     HYRALHGVRKGNLTFMYQNAANIPPSVDWRDHNAVTPPKDQGKCGSCWAFSTVVAVEG
                     INAIKTGQLVSLSEQHLIDCNSVLNNGCDGGLMEPAFEFIKIHGGLATEQNYPYKCQK
                     GICDPSKVGTQVVTIDGFEDVPECNEEALLKAVAHQPVSIAMDANGHDIQFYSQGVFT
                     GQCTTDVNHGVAIVGYGQTPEGMKYWIVKNSWGPKWGEGGFIRIQRGVPDKMGLCGVA
                     VLPSYPLKNSNTPLRTEL"
     misc_feature    549..719
                     /gene="LOC139904524"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     Region: Inhibitor_I29; pfam08246"
                     /db_xref="CDD:462410"
     misc_feature    816..1466
                     /gene="LOC139904524"
                     /note="Papain family cysteine protease; Region:
                     Peptidase_C1; pfam00112"
                     /db_xref="CDD:425470"
     misc_feature    order(870..872,888..890,1296..1298,1359..1361)
                     /gene="LOC139904524"
                     /note="active site"
                     /db_xref="CDD:239068"
     misc_feature    order(1017..1022,1218..1220,1290..1292,1299..1301,
                     1449..1451)
                     /gene="LOC139904524"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     polyA_site      1730
                     /gene="LOC139904524"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tagtcgttat taattgttgg caaacttaaa ccaaaaaaat tagcatacat caaacaagta
       61 tcatatcatt tcaaatcaaa cgtcgtataa acagatcgtt tggaggataa ttactctcga
      121 cactcgactc gtccttatcc tcgccgctga ccaccgttat gattccacca atcacatcaa
      181 ccaattttac tcacacagat ccccaatttt atttcaagaa ataacaaaac atcaagtacc
      241 ccacaaaacc gttaaggggt atctctgaat tgtgggttcc aaaaagggtt aaattcattt
      301 agggtgaagg tggaagaaga tgtcggaggt ggttgaaggt ggtcggcggc ggcggcggtt
      361 gctccctgag tttacgatcg aaagtgcttc agtggtggat aatcttgcta gggctcttaa
      421 caggaaatga gctttgtgta tacatgccgc atcgtccatc tggttccgaa gttctttcca
      481 aacgccttgt ggatagcttt gaataccatg agaaagaact tgaatcggag gaaggattgc
      541 agggcatgta cgatagatgg aggagccacc ataacatagc agaagtaagc catgacgatg
      601 aagctctgcg gttcaatgta ttcaagtcca acgtgcacca tgttcacaaa tcaaacaaga
      661 tggacaggcc atataagtta aagttgaaca agtttgcggc tatgactaac catgagttta
      721 ggagcacata cgctggctca aagattagcc attatcgtgc actccatgga gttcgtaagg
      781 gcaacttgac tttcatgtat caaaacgccg ctaatatccc tccttcggtt gattggaggg
      841 atcataacgc cgtcacccct cccaaagatc aaggcaaatg cggaagttgt tgggcatttt
      901 ctacggtggt tgcagtcgaa ggaataaacg cgattaaaac agggcaatta gtatcattat
      961 cagaacagca ccttatcgat tgtaatagtg tattaaacaa tggatgtgat gggggactaa
     1021 tggaaccggc attcgaattc attaaaatcc atggaggtct agctacagag cagaactacc
     1081 cttacaaatg tcaaaaaggg atctgtgatc cgtctaaggt cggcactcaa gttgtgacga
     1141 ttgatggatt tgaggatgta cctgagtgca acgaggaagc attactaaaa gcagttgcac
     1201 accaacctgt atctattgcc atggatgcta atggtcacga tattcagttc tattcacagg
     1261 gagtttttac tggacaatgt acaacggatg ttaatcatgg tgtagcgatt gtcggatatg
     1321 gtcaaactcc cgaaggaatg aagtattgga tagtgaagaa ctcgtggggg cccaaatggg
     1381 gagagggtgg attcatacga atacaacgtg gtgttccgga taaaatggga ctttgcggtg
     1441 tagcagtgtt gccctcttat cctcttaaga actcgaatac gccgcttagg actgaactct
     1501 aagaagaaaa aaaacagaca aacaaattag gataatgttt atcaatcagc ttgttccaat
     1561 ataatctgaa ttcttataaa attacggtag tcagatcaaa tatgtagttg tttaaggatt
     1621 gtaattttgg cggagaggtt caataatttt cttgttattt tgttggacca agatttgtat
     1681 atgaatgctg agtactctac tctagtgaat atgttatttt gttagatcaa
//
LOCUS       XM_071886435            1649 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vignain-like (LOC139904524),
            transcript variant X3, mRNA.
ACCESSION   XM_071886435
VERSION     XM_071886435.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1649
                     /gene="LOC139904524"
                     /note="vignain-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139904524"
     CDS             465..1421
                     /gene="LOC139904524"
                     /codon_start=1
                     /product="vignain-like isoform X3"
                     /protein_id="XP_071742536.1"
                     /db_xref="GeneID:139904524"
                     /translation="MYDRWRSHHNIAEVSHDDEALRFNVFKSNVHHVHKSNKMDRPYK
                     LKLNKFAAMTNHEFRSTYAGSKISHYRALHGVRKGNLTFMYQNAANIPPSVDWRDHNA
                     VTPPKDQGKCGSCWAFSTVVAVEGINAIKTGQLVSLSEQHLIDCNSVLNNGCDGGLME
                     PAFEFIKIHGGLATEQNYPYKCQKGICDPSKVGTQVVTIDGFEDVPECNEEALLKAVA
                     HQPVSIAMDANGHDIQFYSQGVFTGQCTTDVNHGVAIVGYGQTPEGMKYWIVKNSWGP
                     KWGEGGFIRIQRGVPDKMGLCGVAVLPSYPLKNSNTPLRTEL"
     misc_feature    468..638
                     /gene="LOC139904524"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     Region: Inhibitor_I29; pfam08246"
                     /db_xref="CDD:462410"
     misc_feature    735..1385
                     /gene="LOC139904524"
                     /note="Papain family cysteine protease; Region:
                     Peptidase_C1; pfam00112"
                     /db_xref="CDD:425470"
     misc_feature    order(789..791,807..809,1215..1217,1278..1280)
                     /gene="LOC139904524"
                     /note="active site"
                     /db_xref="CDD:239068"
     misc_feature    order(936..941,1137..1139,1209..1211,1218..1220,
                     1368..1370)
                     /gene="LOC139904524"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     polyA_site      1649
                     /gene="LOC139904524"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgttattaa ttgttggcaa acttaaacca aaaaaattag catacatcaa acaagtatca
       61 tatcatttca aatcaaacgt cgtataaaca gatcgtttgg aggataatta ctctcgacac
      121 tcgactcgtc cttatcctcg ccgctgacca ccgttatgat tccaccaatc acatcaacca
      181 attttactca cacagatccc caattttatt tcaagaaata acaaaacatc aagtacccca
      241 caaaaccgtt aaggggtatc tctgaattgt gggttccaaa aagggttaaa ttcatttagg
      301 gtgaaggtgg aagaagatgt cggaggtggt tgaaggtggt cggcggcggc ggcggttgct
      361 ccctgagttt acgatcgaaa gtgcttcagt ggtggataat ctgccttgtg gatagctttg
      421 aataccatga gaaagaactt gaatcggagg aaggattgca gggcatgtac gatagatgga
      481 ggagccacca taacatagca gaagtaagcc atgacgatga agctctgcgg ttcaatgtat
      541 tcaagtccaa cgtgcaccat gttcacaaat caaacaagat ggacaggcca tataagttaa
      601 agttgaacaa gtttgcggct atgactaacc atgagtttag gagcacatac gctggctcaa
      661 agattagcca ttatcgtgca ctccatggag ttcgtaaggg caacttgact ttcatgtatc
      721 aaaacgccgc taatatccct ccttcggttg attggaggga tcataacgcc gtcacccctc
      781 ccaaagatca aggcaaatgc ggaagttgtt gggcattttc tacggtggtt gcagtcgaag
      841 gaataaacgc gattaaaaca gggcaattag tatcattatc agaacagcac cttatcgatt
      901 gtaatagtgt attaaacaat ggatgtgatg ggggactaat ggaaccggca ttcgaattca
      961 ttaaaatcca tggaggtcta gctacagagc agaactaccc ttacaaatgt caaaaaggga
     1021 tctgtgatcc gtctaaggtc ggcactcaag ttgtgacgat tgatggattt gaggatgtac
     1081 ctgagtgcaa cgaggaagca ttactaaaag cagttgcaca ccaacctgta tctattgcca
     1141 tggatgctaa tggtcacgat attcagttct attcacaggg agtttttact ggacaatgta
     1201 caacggatgt taatcatggt gtagcgattg tcggatatgg tcaaactccc gaaggaatga
     1261 agtattggat agtgaagaac tcgtgggggc ccaaatgggg agagggtgga ttcatacgaa
     1321 tacaacgtgg tgttccggat aaaatgggac tttgcggtgt agcagtgttg ccctcttatc
     1381 ctcttaagaa ctcgaatacg ccgcttagga ctgaactcta agaagaaaaa aaacagacaa
     1441 acaaattagg ataatgttta tcaatcagct tgttccaata taatctgaat tcttataaaa
     1501 ttacggtagt cagatcaaat atgtagttgt ttaaggattg taattttggc ggagaggttc
     1561 aataattttc ttgttatttt gttggaccaa gatttgtata tgaatgctga gtactctact
     1621 ctagtgaata tgttattttg ttagatcaa
//
LOCUS       XM_071886436            2727 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome b561, DM13 and
            DOMON domain-containing protein At5g54830-like (LOC139904525),
            mRNA.
ACCESSION   XM_071886436
VERSION     XM_071886436.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2727
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2727
                     /gene="LOC139904525"
                     /note="cytochrome b561, DM13 and DOMON domain-containing
                     protein At5g54830-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139904525"
     CDS             1..2727
                     /gene="LOC139904525"
                     /codon_start=1
                     /product="cytochrome b561, DM13 and DOMON
                     domain-containing protein At5g54830-like"
                     /protein_id="XP_071742537.1"
                     /db_xref="GeneID:139904525"
                     /translation="MPNLQSFIIISLGFLILPQLTLSDSNSNHNCSKTNVSLLNFKTQ
                     FVMCQHQVRGTFTIINDCSFKVQEFDMIKGGSDIHWWGAVSDSYDNLTSGFVISHDKF
                     NTTTYKNETFTVNLMSNVTWDDIKVVSIWEKTMAADYGHVVLKEMNESPSPTPGPSPA
                     PPTFNFKGSEVVKIDGEPTMFDNCKKLADNYRLRWTLRVEDNVIDIGLEGAIDIQSYM
                     AFGWADPYKEHAHMLGADVAVTSFTDKGIPFVDDYHITKYSECSINKNGDVEGVCPDT
                     MYVDHDRDKVNNTMLVYGHRKDGVSFVRYQRPLKSIDKKYDWNIDVKKNMTCIWALGL
                     IKSPDSVIPLYLPQKHGKTYGHVHINVSESVNECVGPLVAKNTQDQDLVIADEKEQLV
                     VTTGPALHYPNPPNPSKVLYINKKEAPFLRVERGVPVKFSIQAGHNVAFYVTSDPLGG
                     NATSRNLLENIYAGGPEAHGVQSRPKVIEWTPNRNIPNRVYYQSFYAQKMGWKIQVVD
                     GGLADMYNSSVLLDDQQVEFFWTLSKTSISIAARGQKKSGYLAIGFGSGMVNCFAYVG
                     WVDANGTGHVKSYYIDGKDPQNLHPTNENLTYARCKSEQGVITLEFTRPLDPKCDGRK
                     RVECNNMVEPKSPLKVIWAMGAEWSAHHLSKSNMHTLTSSKPVRVSLIRGSAETEEQL
                     RPVLAVHGFMMFLAWGMFFPFGVVAARYMKRLSGDIWFKVHVYSQWSGLTITFLGILF
                     AVAELRGLYIGSLHVKFGILTIILGCLQPINAYLRPKKGDDGEEPLPKRKVWEFMHFY
                     CGRCAIFSGVLAMFTGLKHLGVRYDGENVRGLLWALVVWILVGIIIVLYLEYAQKRYI
                     KERFFGLGHWVLGDDEDEESELLSPSRIHGVNVEKLALSSETSEIQLEPLSR"
     misc_feature    139..438
                     /gene="LOC139904525"
                     /note="Electron transfer DM13; Region: DM13; cl02735"
                     /db_xref="CDD:470661"
     misc_feature    547..1065
                     /gene="LOC139904525"
                     /note="DOMON-like domain of copper-dependent
                     monooxygenases and related proteins; Region: DOMON_DOH;
                     cd09631"
                     /db_xref="CDD:187689"
     misc_feature    order(649..651,655..660,706..714,955..957,961..963,
                     985..987,1048..1050)
                     /gene="LOC139904525"
                     /note="putative ligand binding site [chemical binding];
                     other site"
                     /db_xref="CDD:187689"
     misc_feature    1567..2010
                     /gene="LOC139904525"
                     /note="Possible catecholamine-binding domain present in a
                     variety of eukaryotic proteins; Region: DoH; smart00664"
                     /db_xref="CDD:214768"
     misc_feature    order(1645..1647,1651..1656,1684..1692,1876..1878,
                     1897..1899,1921..1923,1975..1977)
                     /gene="LOC139904525"
                     /note="putative ligand binding site [chemical binding];
                     other site"
                     /db_xref="CDD:187689"
     misc_feature    1987..2550
                     /gene="LOC139904525"
                     /note="Eukaryotic cytochrome b(561), including the FRRS1
                     gene product; Region: Cyt_b561_FRRS1_like; cd08760"
                     /db_xref="CDD:176490"
     misc_feature    order(2065..2067,2167..2169,2260..2262,2386..2388)
                     /gene="LOC139904525"
                     /note="putative heme binding sites [chemical binding];
                     other site"
                     /db_xref="CDD:176490"
ORIGIN      
        1 atgcctaatt tacaatcatt tataataatt tcattagggt ttctcatatt gccccaactt
       61 accttatctg attccaattc taatcacaat tgctcaaaaa ccaacgtttc attactcaat
      121 ttcaaaaccc aatttgttat gtgtcaacat caggtaagag gaacatttac tataatcaat
      181 gactgttctt ttaaggttca agaattcgat atgattaaag gtggttccga tattcattgg
      241 tggggtgctg ttagtgattc ttatgataat ctaacatctg ggtttgttat atctcacgac
      301 aaattcaaca caaccactta taaaaatgaa acctttactg ttaatttaat gagtaatgtt
      361 acttgggatg acattaaggt tgtttcgatt tgggaaaaaa ctatggctgc cgattacggg
      421 catgtggtat tgaaagaaat gaatgaatct cccagcccga cccctggccc gtccccggcc
      481 ccaccaactt ttaactttaa agggagtgag gttgttaaga tcgatggaga gcctactatg
      541 tttgataatt gtaagaagtt agcggataat tatagattaa gatggacgtt aagagtagaa
      601 gacaatgtca ttgatattgg gttggaaggg gctattgata tccaaagtta tatggctttt
      661 gggtgggcgg atccttataa agaacacgct catatgcttg gtgctgatgt ggcagtgacg
      721 agttttaccg ataagggaat accgtttgtg gatgattatc atattactaa atatagtgag
      781 tgttcgatta acaaaaatgg tgatgttgaa ggtgtgtgtc cggatacaat gtatgttgat
      841 catgatcgtg ataaggttaa caatactatg ttagtttacg gacataggaa agatggcgtc
      901 tcgtttgtga ggtatcagag accgttgaaa tcgattgaca aaaagtatga ttggaatatt
      961 gatgtaaaaa agaatatgac ttgtatatgg gctttaggat taatcaaatc gcctgattcg
     1021 gtcatacctt tataccttcc tcaaaagcat ggtaagactt atgggcatgt tcatattaat
     1081 gtttcggaga gtgttaacga atgtgtgggc ccactcgttg ctaaaaacac acaagatcaa
     1141 gatcttgtta ttgcagacga gaaagaacaa ctcgttgtta ctacagggcc agccttgcat
     1201 tacccgaacc caccgaaccc ttcaaaagtt ttgtatatca acaaaaagga agctcctttt
     1261 ttgagggtcg aaagaggggt cccagttaag ttttcaatac aagcgggtca taatgttgct
     1321 ttttatgtca catctgatcc acttggtggg aatgcaacat caagaaactt gttggagaat
     1381 atttatgcag gtgggcccga ggcccacggg gtacagtcga ggcccaaagt gatagaatgg
     1441 actcctaacc gaaacattcc taatagagtc tattatcagt ctttttatgc ccaaaaaatg
     1501 ggctggaaga ttcaagtagt tgatggaggt cttgctgata tgtataatag cagtgttctt
     1561 ttagatgatc aacaagttga atttttttgg acactttcaa aaacgtcaat atctattgca
     1621 gctcgaggtc aaaagaaaag cggttatctt gcaattgggt ttgggtcagg aatggtgaat
     1681 tgttttgcat atgtaggttg ggttgatgct aatggtacgg gtcatgtaaa atcatattat
     1741 atagatggta aggacccaca aaatttgcat ccaactaatg aaaacttgac atatgcaaga
     1801 tgcaaatccg aacaaggagt aatcactcta gaattcaccc gaccattgga tccaaaatgt
     1861 gatggacgta aacgggtcga atgtaacaac atggtggagc ccaagtctcc tcttaaagtc
     1921 atatgggcca tgggtgctga atggtctgca caccatttga gtaaaagcaa catgcataca
     1981 ttaacaagta gtaaaccagt cagggtttca cttattcgtg ggtcagctga aacagaggag
     2041 caattacgac ccgttttagc tgtgcatggg tttatgatgt ttcttgcatg gggtatgttt
     2101 ttcccatttg gggttgtggc tgctcgatac atgaaacgtt taagtggtga tatatggttc
     2161 aaggttcatg tttattcaca gtggtcaggt ttaactatta cttttcttgg tattcttttt
     2221 gctgtagctg agcttcgggg tttatatatt gggtcgttac atgttaagtt tggaatcttg
     2281 acaataatct tgggttgctt acaacccatt aacgcgtact taagacctaa aaagggtgat
     2341 gatggtgaag aaccgttgcc gaaacgaaaa gtttgggaat ttatgcattt ttactgtgga
     2401 agatgtgcga tattttctgg cgttttagct atgtttaccg ggttgaagca tttaggagtt
     2461 agatatgatg gcgaaaacgt tagaggattg ttgtgggcat tggtagtttg gattcttgta
     2521 ggaattatta ttgtattata tttggaatac gcgcaaaaaa ggtatataaa agagaggttt
     2581 ttcgggttgg gtcattgggt tttgggtgat gatgaagatg aggaaagcga acttttgagc
     2641 ccgagcagga tacatggagt aaatgtcgaa aaactcgcac tttcttcgga aacatcggaa
     2701 attcagctag aacctttgtc tagatag
//
LOCUS       XM_071886437            3590 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904526), mRNA.
ACCESSION   XM_071886437
VERSION     XM_071886437.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3590
                     /gene="LOC139904526"
                     /note="uncharacterized LOC139904526; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904526"
     CDS             348..3482
                     /gene="LOC139904526"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742538.1"
                     /db_xref="GeneID:139904526"
                     /translation="MKCVLFLGFFSIFFITSVNSYIDLDGNRVEFESGYEPKMTFKYD
                     RINEVKKQCSSILPLDSNQKTYGKRLYKIKEKMSFVNGDWWQDLDKAPLMPFDHKPNR
                     SNINGSYFDQRSPVNLISFWVTDVDRAHRSKNSVSINGILQLGITIGGLFGQRPYEDN
                     PGFKIYPEHSELTISFQGIISDNTEDNNGETIMCLLGNTMLPYRYPDSSNPWDWVKEP
                     GYINQPALIQDDQILLVIRYPKTFTLTNRGIFGSLKSLNPKSNQKYFDEVHVSASMSG
                     SANYEFNSEKLVSKACNPYPYKDGSDNPEFGMYKGVDFCLILERFTGQDTLTVVPNWK
                     CNGTEELCSKLGPFESNELIKSTNGSFKGVRLSFQDVRCEETSVKGKKEKLTKVAGLI
                     RVVQPFEERYNAAQRTGLNNMTLSVEGIWESSSGQLCMIGCRGIVDQESSSCSSRICL
                     YIPLSFSIKQRSIIVGTISSIEEGNTGNSSYFPLAFEKLVRPSELYDQYTESKPYYTY
                     SKIQLAGSLLEKHEPFSFGTVVKKSLLTFPKVEDSDSFLVGLSLLSEDLTLHHPAVPE
                     SGSTVFSTTDVLVEILSLGPLFGRYFYLRNETITEEETPYRSKKTLTERELLLNVSGQ
                     ITLLGPKYSNFSNLFVEGLYHPHVGKLYMVGCRDVRASWKVLYDSMDLEDGLDCLIEV
                     VLSYPPTTTRWLVNPTARISITSQRNEVDPLFFSPVKLQTVPIMYRAQREDILSRQGI
                     EGILRALTLSVAIGCILSQLFYIKENSDSSPFVSIVMLAVQSVGYGIPLVTGAEAIFK
                     KSKSYEESSVLGKSQMIQVIDYTVKILVLVSFSLTLRLYQKVWRARIRLLTRAPLEPN
                     RVPSDKWVLLVTGVVHVLGFVCVLMVHKLQSWLVELEEYVGLVQDLFLLPQVIGNLIW
                     QINSKPLRKSYFIGLTVIRLLPHVYDYMRSPIPNPYISYDYEFVNPHLDFYSKIGDIV
                     IPTIALLLAIVVQVQQRLGYEKLVQVFDFGKFKLLPQRSVAYERLSPVVEEAEMTSGS
                     VNGSGSTRKEVDIE"
     misc_feature    495..3332
                     /gene="LOC139904526"
                     /note="Protein of unknown function (DUF2921); Region:
                     DUF2921; pfam11145"
                     /db_xref="CDD:431679"
     polyA_site      3590
                     /gene="LOC139904526"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccttggctcg caagtcacac aaaaaaaaaa agaaaataaa aatcatgaga cacacacatc
       61 ttaccagttt cagttgactt ccacttcaat cttccttatg aaatatatag atccaacaac
      121 cacttaatca cttcaatctt catacaataa cactacttca cagcagaaga ttcaagaacc
      181 cccaaaagat tcaaaggtta gctttaaaat cagtcgatta agattcattt cacacttaat
      241 ttgcttaaag ttgtgatctt tatcataccc aagttccata ttctgctctt aatcaagaat
      301 cagtaaacgg gtattcaaga cttcaatttc tgtttaaatt ttggtcaatg aagtgtgttt
      361 tattcttagg gtttttttct atttttttta ttacgtcagt aaactcgtat attgatcttg
      421 atggtaatcg tgttgaattt gaatctggat atgaacccaa aatgactttt aaatacgata
      481 gaattaatga ggttaaaaaa caatgttctt caattttacc tcttgattct aaccaaaaaa
      541 cctatggaaa aagattgtat aaaattaagg aaaaaatgtc atttgttaat ggtgactggt
      601 ggcaagattt agataaggct cctttgatgc catttgatca taaaccaaat aggtcaaaca
      661 taaatgggtc atattttgac caaagatcac cagtaaactt gatttcattt tgggttactg
      721 atgtagaccg ggctcatcga tccaaaaact ccgttagtat taacggaatt ttgcagctcg
      781 gtataacaat cgggggttta ttcgggcaaa gaccgtatga ggataaccct ggctttaaaa
      841 tataccctga gcattcagaa ttaacgatct cgtttcaagg gatcatatca gataataccg
      901 aagataacaa tggtgaaacg ataatgtgtt tactcggtaa cacgatgtta ccatatcgtt
      961 accctgattc gagtaacccg tgggattggg ttaaagaacc gggctacatt aatcagccag
     1021 cactcattca agatgatcaa attttgctcg ttatccgtta cccaaaaacc tttactttaa
     1081 ccaacagagg aattttcggt agtttgaaaa gtttgaaccc aaaatcgaat cagaagtatt
     1141 ttgatgaggt acatgtttcc gcatctatga gtggttcagc gaattacgag tttaattctg
     1201 aaaaacttgt ctcaaaagct tgcaacccgt atccgtataa agacggttct gataacccag
     1261 aatttgggat gtataaaggt gttgactttt gccttattct tgaacggttt acgggtcaag
     1321 atacgttgac tgttgtcccg aattggaaat gtaacgggac tgaagaattg tgcagcaaat
     1381 tgggtccgtt tgagtccaat gaacttataa aatcaactaa tggaagcttt aaaggcgtac
     1441 gacttagctt tcaagatgtt cgatgtgaag aaacgtctgt aaagggtaaa aaagagaaac
     1501 ttactaaagt tgcagggctt attagagtcg ttcagccatt cgaggaacgt tataatgcgg
     1561 ctcaacgaac tgggctgaat aacatgaccc tttcggttga aggaatatgg gaatcatcca
     1621 gtgggcagtt gtgtatgatc ggttgccgtg gtatcgttga tcaagaatcg agcagttgta
     1681 gttcgcgtat atgcttatac ataccactct cgttttcgat caagcaacga agcataattg
     1741 ttggaacgat atcgagtatt gaagagggca atacgggtaa ttcatcttac tttcctttag
     1801 ctttcgagaa gctggttcga ccttcggagc tatacgatca atacaccgag tcaaaaccgt
     1861 attacactta ctccaagatc caattagccg gatcgttact tgagaaacat gaaccgttta
     1921 gttttgggac cgtggttaaa aagtcacttt taaccttccc gaaagtcgaa gattctgatt
     1981 cgtttcttgt tggtttgtct cttttatccg aagatcttac gcttcatcac cctgcggttc
     2041 ctgaatctgg gtcgaccgtt ttttcaacaa ctgatgtact cgtcgaaatt ttatcgcttg
     2101 gcccgttgtt tgggcgttat ttttatctgc gaaatgagac aattacagaa gaagaaaccc
     2161 cgtatcggtc taaaaagacg ctcaccgaga gggagctttt attgaacgta tcgggtcaaa
     2221 ttactctctt gggcccgaaa tatagtaact tttcaaatct tttcgttgaa gggttgtatc
     2281 acccgcatgt cgggaaattg tatatggtgg ggtgtcgaga cgtacgggcc tcgtggaagg
     2341 ttttatacga cagcatggat cttgaagatg ggttggattg tttgattgaa gttgtgctat
     2401 catatcctcc tacgacgacc cgttggctcg ttaatccaac agccaggatt tcaataacga
     2461 gtcaaagaaa cgaagttgac ccgttgtttt tcagcccagt taagcttcaa actgtcccga
     2521 ttatgtatcg ggctcaacgg gaagacattc tttcaagaca aggcatcgag gggatcttac
     2581 gggctcttac cctttcggtt gcaatcgggt gtatattaag tcaactgttt tacattaaag
     2641 aaaattctga ctcgagcccg tttgtttcga tcgtgatgtt agcggtccag tcggttgggt
     2701 acggaatccc acttgttacg ggtgccgaag cgattttcaa aaagtcaaaa tcgtacgagg
     2761 aatcttcggt acttggaaaa agtcaaatga tacaagttat agattacaca gtcaagattc
     2821 ttgttttggt atcattctca ttaacattaa ggttgtacca gaaagtttgg agggcccgaa
     2881 ttcggttact cactcgggcc ccacttgaac caaaccgtgt accgtctgat aagtgggttc
     2941 ttctcgtaac cggggtggtt cacgtactag ggttcgtatg tgttctcatg gttcacaagc
     3001 tacaatcatg gctagttgaa ctcgaagaat acgttggttt agttcaagat ttgtttttac
     3061 tccctcaagt tataggtaac ttaatatggc agattaacag caaaccatta cgtaaatcgt
     3121 attttattgg gttaactgta attcgactgc ttcctcatgt gtacgactac atgcgatcgc
     3181 cgattccaaa tccgtatatt tcttatgatt atgagtttgt gaacccgcat ctcgatttct
     3241 actcgaagat aggggacatt gtgataccta caattgcgtt acttctcgcg atcgtagtac
     3301 aagttcaaca aaggttgggg tatgagaaac ttgtgcaggt ttttgatttt gggaaattta
     3361 aattgttgcc gcagcggtct gtggcatatg agcggttgtc gccggtggtg gaggaggcgg
     3421 agatgacttc cggcagtgtc aatggcagcg gctcaacccg aaaggaggtt gatatagaat
     3481 gaatatgatg tagcgttttt ttgtaatgtt tgggtcatgt tgtattgttg atggtgtgac
     3541 acaattcaac tttatgtaac ttgacttact atatgcatat actttgatta
//
LOCUS       XM_071886438             914 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyubiquitin 11-like
            (LOC139904527), mRNA.
ACCESSION   XM_071886438
VERSION     XM_071886438.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..914
                     /gene="LOC139904527"
                     /note="polyubiquitin 11-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 72
                     Proteins"
                     /db_xref="GeneID:139904527"
     CDS             109..798
                     /gene="LOC139904527"
                     /codon_start=1
                     /product="polyubiquitin 11-like"
                     /protein_id="XP_071742539.1"
                     /db_xref="GeneID:139904527"
                     /translation="MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
                     FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV
                     KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
                     TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
                     LHLVLRLRGGC"
     misc_feature    109..336
                     /gene="LOC139904527"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     Region: Ubl_ubiquitin; cd01803"
                     /db_xref="CDD:340501"
     misc_feature    order(124..135,139..141,208..219,226..228,232..234,
                     238..240,244..255,310..336)
                     /gene="LOC139904527"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    order(130..144,199..213,226..228,232..234,238..240,
                     244..255,310..312,316..336)
                     /gene="LOC139904527"
                     /note="E1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    337..564
                     /gene="LOC139904527"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     Region: Ubl_ubiquitin; cd01803"
                     /db_xref="CDD:340501"
     misc_feature    order(352..363,367..369,436..447,454..456,460..462,
                     466..468,472..483,538..564)
                     /gene="LOC139904527"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    order(358..372,427..441,454..456,460..462,466..468,
                     472..483,538..540,544..564)
                     /gene="LOC139904527"
                     /note="E1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    565..792
                     /gene="LOC139904527"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     Region: Ubl_ubiquitin; cd01803"
                     /db_xref="CDD:340501"
     misc_feature    order(580..591,595..597,664..675,682..684,688..690,
                     694..696,700..711,766..792)
                     /gene="LOC139904527"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    order(586..600,655..669,682..684,688..690,694..696,
                     700..711,766..768,772..792)
                     /gene="LOC139904527"
                     /note="E1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     polyA_site      914
                     /gene="LOC139904527"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccaatttcat tcattcccaa ttcatcacaa tcgcattgca atcaatcatc tctttaaaaa
       61 cctaattctt tttctctcat atatcactca aatttcaaat ttctcaagat gcagatcttc
      121 gttaagacac tcaccggtaa aacgattact cttgaagtcg agagctcaga taccatcgac
      181 aacgttaaag ccaaaattca ggataaggaa ggaatcccac cagaccagca gaggcttatt
      241 ttcgctggta agcagcttga agatggccga acccttgctg actacaacat ccagaaggag
      301 tcgacccttc atctcgtgtt gaggttgagg ggaggtatgc agattttcgt taagacgttg
      361 actggcaaga ctataacttt ggaggttgag agttcggaca caattgataa tgtcaaagcg
      421 aagattcagg ataaggaagg tatcccacct gaccagcaga gattgatttt tgctggtaag
      481 cagttggagg atggaaggac tttggctgat tataacatac agaaggagtc tacacttcat
      541 cttgtgttga ggttgagggg tgggatgcag atatttgtga aaacgttgac tgggaagacg
      601 attactttgg aagtggagag ttctgatacg attgataacg tcaaggccaa aatacaagat
      661 aaggagggca tcccgccgga tcagcagagg ctgatctttg ctgggaaaca gttggaagat
      721 gggcgaactc ttgctgatta taatatccag aaggagtcta ctcttcacct tgtacttcgt
      781 cttcgtggtg gttgctgagg gtcttctgtt tgtttctttg tgaatgtgaa tgttggtggt
      841 tttttatgtg acaatgatat tggtttatgc ttttagtttc tataataata atcaacaatc
      901 agtgattgat tcaa
//
LOCUS       XR_011778852             310 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904528), ncRNA.
ACCESSION   XR_011778852
VERSION     XR_011778852.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..310
                     /gene="LOC139904528"
                     /note="uncharacterized LOC139904528; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904528"
     ncRNA           1..310
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904528"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904528"
ORIGIN      
        1 ggcagttgtg gttgatcagg gacttgaggc tgatgtctaa ggtgacattt taagatacat
       61 tgaagaatta attagtagcg ggatttgaca acgtgtaatg tctcttataa agaaataaag
      121 ggagtcattt cttcacccaa gagttgagaa aagacagccc tttacctgaa ggaactcaat
      181 cgagaagaac cagctggttt tggtgggccc agctctgaac attatattct tgactcgagg
      241 ccccaaggat gtgaaagata tatttgccac tttaaaagat agtgcagggg acatctctgg
      301 cagtactgac
//
LOCUS       XR_011778853             216 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904529), ncRNA.
ACCESSION   XR_011778853
VERSION     XR_011778853.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..216
                     /gene="LOC139904529"
                     /note="uncharacterized LOC139904529; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904529"
     ncRNA           1..216
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904529"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904529"
ORIGIN      
        1 gatccttctg agaaacggca attgggtgtt gcatgtcttc aacattttca tatgatttcg
       61 aaatataata atggttcact ctggaattat aataatggtt cactctggaa ataataataa
      121 tgccatttca tgtcattctt tctcaagatc ataatcagat tgtagctttg ttggagtaca
      181 tcagttatga ttttcaccca caaattcaaa cagcgc
//
LOCUS       XR_011778854             434 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904530), ncRNA.
ACCESSION   XR_011778854
VERSION     XR_011778854.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..434
                     /gene="LOC139904530"
                     /note="uncharacterized LOC139904530; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904530"
     ncRNA           1..434
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904530"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904530"
ORIGIN      
        1 ctaaagccca aattaataaa tcaggaacta gggttccact atagaaccta tttcaccgcc
       61 ataacaactg atccttgcaa gccttcacaa cattgcgtcg tcgaccgcca cctgtcgtac
      121 tccctgaaaa ccttccggcg tcatcatgag agctaagtgg aagaagaaga gaatgaggag
      181 attgaagagg aagcgtcgaa agatgagaca gagatccaag taaactcaat cgttcaccat
      241 cactatcgat ctgtttctgg tttttaaatt ccgtattgtt agcttctttg aattttgttt
      301 tcagtattac aatcatacat ttgctcgttg aattacagtt tgtggtgaaa tgaatttact
      361 agcattattc tcccctatct gcttgctatt agaattattt ttttgtttat ttaatcaatt
      421 actattagtt gatt
//
LOCUS       XM_071886439            3394 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA topoisomerase 1
            alpha-like (LOC139904531), mRNA.
ACCESSION   XM_071886439
VERSION     XM_071886439.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3394
                     /gene="LOC139904531"
                     /note="DNA topoisomerase 1 alpha-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139904531"
     CDS             148..3018
                     /gene="LOC139904531"
                     /codon_start=1
                     /product="DNA topoisomerase 1 alpha-like"
                     /protein_id="XP_071742540.1"
                     /db_xref="GeneID:139904531"
                     /translation="MSNSSSSSDDDKPLVLRRSLQGDKVKLSSQLAKASTKPNDESDS
                     EDDKPLSSKFSASSKENGNRAKKGPVNGVVSLPKPQVIDDSDDEKPLSAKFAKKPKVK
                     EDSDDDKPQVEDEDSDDDRPLSAKFAKKPQVKEDSDDEKPQVKDEDSDDDRPLSAKFA
                     KKPEVKEDFDDDRPLSAKFAKKTQVNDEDSDDDRPLSANFAKKTQVKDEESDDGKPQV
                     KDEDSDDEKPLSAKFSKKPQVKDEDSDDAKPLSAKFAKKSNVGPSLVNKVHQNGSAVR
                     KIGSNKRPLDDKKSFAQSSVKKSKLSDSSTPVNRKRVPLKSDSTSDEDEDDDDDDFED
                     DDDDDDDDDDDDDDDDDDDDVPISKRRKKQDPSSSKSPSVKPKMVKKNSRQTNKKSKV
                     VKSSKYSKPSKVPPGSGEGQKWTTLIHNGLIFPPAYKPHGIKMFYDGKPVDLTPEQEE
                     VATMFAVMLDTDYMAKPKFKENFWEDWQKILGKKHTIQNLDKCDFKPIYEWHQSEKEK
                     KKQMTTEEKKALKEERMKIEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKL
                     KRRIYPHDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWIDPINSKEFKYVFL
                     AASSSLKGQSDKEKYEKARMLKGYIEGIRIAYTKDFKSKDVTKKQVAVATYLIDKLAL
                     RAGNEKDDDEADTVGCCTLKVENVTPRPPNTLVFDFLGKDCVRYLKDVTVELPVFEAI
                     QQFRTGKKDSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDNMLSRETKDG
                     NVAEKVVVYQQANKEVALICNHQRSVSKSHSAQMTRLNEKIDELKDVIKELETDLTRA
                     KKGKPPLNDSDGKPKRNLNPEALEKKIAQTNAKIEKIKQDVKSKEDLKTVALGTSKIN
                     YLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF"
     misc_feature    <247..1098
                     /gene="LOC139904531"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     Region: MSCRAMM_ClfA; NF033609"
                     /db_xref="CDD:468110"
     misc_feature    1381..2019
                     /gene="LOC139904531"
                     /note="Eukaryotic DNA topoisomerase I, DNA binding
                     fragment; Region: Topoisom_I_N; pfam02919"
                     /db_xref="CDD:460746"
     misc_feature    1804..2934
                     /gene="LOC139904531"
                     /note="DNA Topoisomerase I (eukaryota); Region: TOPEUc;
                     smart00435"
                     /db_xref="CDD:214661"
ORIGIN      
        1 cctttcgtgt gcagtatcag tacctacgta acgcaaccct ctctatctcc ctaaaattct
       61 cccaaaagtc acccaagacg gtaccggaat atagggttca accgccttct caccgtcgtt
      121 caatcggaca atagagaact gacctaaatg agtaattcat catcatcatc tgatgatgat
      181 aaacccttgg tgcttagaag gagcttgcaa ggtgataaag tgaagctttc ttcgcagctt
      241 gctaaagctt ctacgaaacc aaatgatgaa tcagattccg aagatgataa acccctgagt
      301 tctaaatttt cagcttcatc aaaggagaat ggtaatcgag ctaagaaagg gccggttaat
      361 ggtgtggttt cactgcctaa accacaagta atagatgatt ctgatgatga gaaaccactg
      421 tctgctaaat ttgccaagaa accaaaagta aaagaggatt ctgatgatga taaaccacaa
      481 gtagaagatg aggattctga tgatgataga ccattgtctg ctaaatttgc caagaaacca
      541 caagtaaaag aggattctga tgatgagaaa ccacaagtaa aagatgagga ttctgatgat
      601 gatagaccat tgtctgctaa atttgccaag aagccagaag taaaagagga ttttgatgat
      661 gatagaccat tgtctgctaa atttgccaag aaaacacaag taaacgatga ggattctgat
      721 gacgatagac cattgtctgc taattttgcc aagaaaacac aagtaaaaga tgaggaatct
      781 gatgatggga aaccacaagt aaaagatgag gattctgatg atgagaaacc attgtctgct
      841 aaattttcca agaaaccaca agtaaaagat gaggattctg atgatgcgaa accactgtct
      901 gctaaatttg ccaagaaatc gaatgtggga ccatcacttg tgaataaagt tcatcaaaac
      961 ggttctgctg taagaaaaat tggatcgaat aagagaccgc tagatgataa aaagtctttt
     1021 gctcaatcat cagttaagaa gtcgaaactt tcagactctt ccacaccagt caaccgcaag
     1081 cgagtacctt tgaaatctga ctccacatca gatgaggatg aggatgatga tgatgatgat
     1141 ttcgaggatg atgatgatga tgatgatgat gatgatgatg atgatgatga tgatgatgat
     1201 gatgatgatg ttccgatatc aaaaagaaga aagaagcaag acccttcaag tagtaagtca
     1261 ccatctgtaa aaccgaaaat ggtaaaaaag aattcgagac agaccaataa aaagtcaaaa
     1321 gtggtaaaaa gttcaaagta ttctaaacca tcaaaggtcc cacccgggtc cggtgaagga
     1381 cagaaatgga caaccttgat tcataatggt ctaatatttc cacctgcata caagcctcat
     1441 ggaattaaga tgttctacga tgggaagcct gttgatttga ctcctgaaca ggaggaggtc
     1501 gcaacaatgt ttgcagtgat gttggataca gattatatgg ccaaacctaa gttcaaagag
     1561 aacttttggg aggattggca aaagattctt ggaaaaaaac acacaatcca gaatctggat
     1621 aaatgtgatt tcaagccaat atatgaatgg catcagtcgg aaaaagagaa aaagaagcag
     1681 atgactacag aagagaagaa ggcattgaaa gaagagagga tgaagattga ggagaagtat
     1741 atgtgggcaa ttgtagacgg tgtcaaagag aaggttggaa atttccgagt tgaaccacca
     1801 gggttattcc gaggccgcgg ggagcatccc aagatgggaa agctgaaaag acgtatctat
     1861 ccacatgata ttaccataaa cattggaaaa gatgctccaa tcccagaatg tccaattcct
     1921 ggtgaaagct ggaaagaaat taggcatgac aatactgtca cttggttagc atactggatt
     1981 gacccaatta attcaaagga atttaagtat gtttttctag ctgctagcag ttcattaaag
     2041 ggtcaaagcg ataaggaaaa atatgagaag gcaagaatgt tgaagggcta catagaaggc
     2101 attagaattg cttacactaa agattttaaa agtaaggatg tgaccaagaa gcaagtagca
     2161 gttgcaacgt atctcattga taaactcgca ctcagagcag gaaatgagaa ggatgatgat
     2221 gaagctgata cagtaggttg ctgcacattg aaagtagaaa atgtcacgcc acgtcctcca
     2281 aataccttag tgtttgactt tcttggtaaa gattgtgtaa gataccttaa agatgttaca
     2341 gtagagcttc ctgtgttcga ggcaattcaa cagttccgaa cagggaaaaa ggacagtgat
     2401 gatctttttg acaagttaga tacaagtaag ttgaacgctc atctgaagga gctcatgcct
     2461 ggccttacag caaaagtttt ccgtacttac aatgcatcca taacattaga taatatgttg
     2521 agtagggaaa caaaggatgg aaatgttgct gaaaaggtag ttgtttacca acaagcaaac
     2581 aaagaggtcg ctctcatatg taaccatcaa cgtagtgttt caaagtctca tagtgctcaa
     2641 atgacaaggt taaatgagaa gatagatgaa ctgaaggatg tgataaaaga gttggaaact
     2701 gatttgactc gtgcaaagaa agggaaacct ccattaaacg attctgatgg aaaaccgaag
     2761 agaaatttga accctgaagc gttagagaag aagatagctc aaactaatgc aaagatcgag
     2821 aaaataaaac aagacgtaaa aagcaaggaa gatttgaaaa cagtagcatt gggtacttcg
     2881 aaaattaatt atcttgaccc gaggataaca gttgcgtggt gtaaaagaca tgaagttccc
     2941 atagagaaga tattcaacaa gtctctacta gccaagtttg cttggtcaat ggatgttgac
     3001 ccaagtttca gattctgaat tttgatagtt tagcagagcg gtggctgcaa cattctcccc
     3061 aacttattaa tttaacaaaa atacatcggc accggtcttt tttttgcatc cttttttatc
     3121 tactgatcac ttcatatgaa agtttggtaa gtgaatctat cttgagttgc tttctccagt
     3181 gaacgtattc tcaaaggaag caacaagttt atgagtaatt tttgaaaagt agcttaaact
     3241 cattttgatg cttaagtatt tggtcagatt gttgaatagt aattgactgt atcatggatg
     3301 attttatcaa caaagaatat tgaaaatgac aaactgctaa actatcgccc tttgaagaaa
     3361 aagaaattca aatttagtgg gattatattg taaa
//
LOCUS       XM_071886440            3810 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides starch synthase 3,
            chloroplastic/amyloplastic-like (LOC139904532), mRNA.
ACCESSION   XM_071886440
VERSION     XM_071886440.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3810
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3810
                     /gene="LOC139904532"
                     /note="starch synthase 3, chloroplastic/amyloplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139904532"
     CDS             196..3612
                     /gene="LOC139904532"
                     /codon_start=1
                     /product="starch synthase 3,
                     chloroplastic/amyloplastic-like"
                     /protein_id="XP_071742541.1"
                     /db_xref="GeneID:139904532"
                     /translation="MEVSLQVHTPFCCGKTVLRDKNHVKIKPFIGSHPSRRINLFSQF
                     TQSCSWYKYSVIAGFSHQIIASSDFSRKRRHKVSTPRANDSAPKGFKPKPSNSRKDQK
                     AIEGKEALNPSISIEVVNPTKKESKTEVKIDKVPEFSQTTKNVKNDITNEISESQLQE
                     NTQIETLSSENEDDEEASMMLKLELEAKLRKQKIEELLKKEKEAELIKKKMEEEVLRK
                     KMEEKLRIQELKKLANETLVKGEKVFCYPKLVTPDQDIEIFLNRTVSSLCDESEILIM
                     GAFNDWRYKSFSVKLDKTNFGLDWWSCKVHVPKEAYKIDFVFFNGKDVYENNEMKDFC
                     IFVEGGMDVFEFEEILLQEKRRELERLAKEQFEREKQLEEQKRIEAEKASSEADRAQA
                     RAEAERRRGILAEVLEKAANVDENVWYIKPSEFKWDDIIKLYYNKSAGPLANAKDLWI
                     LGGYNNWRDGLSIVKKLEKLERKNGGDWWYVDVVVPNRSLVLDWVFADGPPQHASLYD
                     NNNRKDFHAIVSISVPHELFWAEEEHEIYKKLQTERRLREEEIHAKAEKTARLKAETK
                     ERTMKTFLLSQKNVVYTDPLEVRAGDVVTVFYNPVNTVLNGKPEVWFRGSFNRWTHRL
                     GLLPPQKMLPAENGTHVKTSVKVPLDAYVMDFVFSEKETDDGVFDNKNGMDYHIPVSG
                     GITKEPPMHIVHISVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDILNLSN
                     VKDFGFHKSYSWGGTEIKVWFGKVEGLSVYFLEPQNGLFWKGCIYGCNNDGERFGFFC
                     HAALEFLLQTGSHPDVIHCHDWSSAPVAWLFKDEYMHYGLSKARIVFTIHNLEFGAKL
                     IGKAMTYADKATTVSPTYSREVAGNPVIAPHLYKFHGILNGIDPDMWDPFNDKFLPVS
                     YTSENVVEGKKAAKEALQQNLGLKRADLPLVGIITRLTHQKGIHLIKHAIWRALDRGS
                     QVVLLGSAPDPRIQNDFVNLASQLHSTHNDRARLCLTYDEPLSHLIYAGADFILVPSI
                     FEPCGLTQLTAMRYGSIPIVRKTGGLYDTVFDVEHDKERAQSQGLVPNGFNFEGADAA
                     GVDYAVNRAISAWYESRDWFNSLCKLVMEQDWSWNRPALDYLELYHAARK"
     misc_feature    424..3609
                     /gene="LOC139904532"
                     /note="synthase/transferase; Region: PLN02316"
                     /db_xref="CDD:215180"
     polyA_site      3810
                     /gene="LOC139904532"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttctttctt tctttcttca aattattata tactccatta tatttatata tttatattta
       61 tatatcccat aaataaaact acacttatca atgtaactat gcactaaaac agagaaataa
      121 taattgcgaa aataaaaaaa gaggttcaac tttttcaact aaaattgtga tcaagaacag
      181 tgaaggtggg catcgatgga agtatcttta caggttcaca caccattttg ttgtggtaaa
      241 acagttctta gggacaaaaa tcatgtaaag attaaacctt ttattgggtc tcacccttca
      301 agaagaataa acttgttttc acagtttaca caatcatgct cgtggtacaa atattccgtg
      361 attgctgggt tctcgcatca aattattgca agttcagatt tttcaagaaa aaggcgacat
      421 aaagtgtcga caccaagggc taatgactct gccccaaaag gatttaagcc caaaccaagc
      481 aattcaagaa aagatcaaaa agcaattgaa ggtaaagaag ctttaaatcc ttctatttct
      541 atagaggttg tgaatcccac aaagaaagaa agtaaaaccg aagtcaaaat tgataaggtt
      601 cccgagttta gtcaaacgac aaaaaatgta aaaaatgaca tcaccaatga aataagcgaa
      661 tcacagttac aagagaacac tcaaattgag actttgagta gcgaaaatga ggatgatgag
      721 gaagcttcta tgatgttaaa attagaatta gaagcaaaat tacgtaaaca gaaaatcgaa
      781 gaactgctta aaaaagaaaa ggaagcagag ttaattaaaa agaagatgga agaagaggtg
      841 ctcaggaaga aaatggaaga aaaattaaga attcaagaac tcaaaaaact tgctaacgaa
      901 actcttgtaa aaggcgaaaa agtattttgc tatcctaaac ttgtgacacc cgatcaagat
      961 atagaaatat ttcttaatag aactgtttca agtttatgtg acgagtcaga aatcttgata
     1021 atgggggcgt ttaatgattg gcggtataaa tcttttagtg taaagttgga caagacgaat
     1081 ttcggtttgg attggtggtc ttgcaaagtg catgttccaa aggaagcgta caagatcgat
     1141 ttcgtctttt ttaatgggaa agatgtttac gaaaacaatg aaatgaaaga tttttgtata
     1201 tttgtggaag gtggtatgga tgtttttgaa tttgaagaga ttttacttca agaaaaacga
     1261 agagaacttg aaagacttgc aaaagaacaa tttgaaagag agaaacaatt ggaagaacaa
     1321 aaacggatcg aagccgaaaa ggcgtccagt gaagccgatc gagctcaagc tcgtgcagaa
     1381 gccgaaagaa gaagaggaat acttgcagaa gttttggaaa aggcggcgaa tgttgatgaa
     1441 aacgtgtggt atataaagcc tagtgagttt aaatgggacg atattattaa attatattat
     1501 aataagagtg cgggcccact tgcaaacgct aaagatttgt ggattcttgg agggtataat
     1561 aactggagag atggattgtc tattgttaag aagctcgaaa agcttgaacg aaaaaatggc
     1621 ggtgattggt ggtacgttga tgttgtggtc cccaaccgtt cgcttgtatt ggattgggtt
     1681 tttgctgatg gtccacctca gcatgccagt ttgtacgata acaataatcg caaagatttt
     1741 catgcgattg tctcgatatc cgttcctcac gaactatttt gggctgagga agaacatgaa
     1801 atttacaaga aacttcaaac tgaaagaagg ctaagagaag aagaaattca tgcaaaggct
     1861 gaaaaaacag cacggctgaa agcagaaacg aaagaaagaa ctatgaaaac gtttttgctg
     1921 tcacaaaaga acgtagtata cacggacccg ttagaagtac gagcaggaga cgttgtgacg
     1981 gttttttata atcccgtaaa tacggttttg aatgggaaac ctgaagtttg gtttagaggc
     2041 tcgtttaacc gttggacgca ccgcctgggg cttttgccac ctcaaaaaat gttgcctgca
     2101 gaaaatggga cacatgtcaa aacctctgtt aaggtcccat tagatgcgta tgtgatggac
     2161 tttgtgttct ctgagaagga aactgatgac ggtgttttcg acaataagaa tggaatggac
     2221 taccatattc cggtttcggg aggaatcaca aaagaacctc cgatgcacat tgtacatatt
     2281 tcggttgaaa tggcccctat tgcaaaggtg ggaggccttg gtgatgtggt gactagtctt
     2341 tctcgtgctg ttcaggattt aaaccacaat gttgatatca ttcttcccaa gtatgatatc
     2401 ttgaatctta gcaatgtgaa ggactttggt tttcataaga gttactcatg gggtgggaca
     2461 gaaataaaag tttggttcgg gaaggttgaa gggctttctg tatactttct agagccccaa
     2521 aacggactct tctggaaagg ctgcatttat ggttgcaaca atgacggtga aagattcggt
     2581 tttttctgtc atgctgctct tgagttcctt cttcaaactg gatctcatcc tgatgtgatt
     2641 cattgtcacg actggtctag tgcacccgtt gcatggttgt ttaaggatga gtatatgcat
     2701 tatggtctga gtaaagcacg aattgtcttc acaattcata accttgaatt tggggctaaa
     2761 ttgattggta aagctatgac gtatgctgac aaggctacta cggtatctcc gacttattca
     2821 agagaggttg ctggtaatcc tgtaattgcc cctcatttgt ataagtttca tggaatactc
     2881 aatggcatcg acccggatat gtgggacccg tttaatgaca agttccttcc tgtatcttac
     2941 acttcagaaa atgtagtgga aggcaaaaag gctgccaaag aagctttaca acaaaatctt
     3001 ggcctaaaac gggctgatct acccttggtt ggaatcatca cccgtttgac tcatcaaaaa
     3061 ggaattcacc ttatcaaaca cgccatttgg cgggccctcg accgtggcag tcaggtcgtg
     3121 ttgctaggct cggcacctga tcctcggata caaaatgatt ttgttaatct ggctagtcaa
     3181 ctacattcga cacataatga ccgtgcacgc ctatgtttga cctacgatga gccattatct
     3241 cacttgatat atgctggtgc tgatttcata ttagtccctt caatattcga gccttgcggg
     3301 ctaactcaac tcacagcaat gagatatggt tcgataccta tagtgcgcaa aactggagga
     3361 ctttatgaca cagtatttga tgttgaacat gataaagaga gagcacaatc acaaggtctt
     3421 gttccaaatg gttttaactt cgaaggagcc gatgctgctg gtgttgatta tgccgtcaac
     3481 agagcaattt ctgcatggta tgaaagtcgt gattggttca attcgttatg caaattggtg
     3541 atggagcaag attggtcatg gaatcgaccg gctcttgatt accttgaact ctaccatgca
     3601 gctcgaaagt gaaataattg aagacgagtt gacgaataaa actgaggtcc gattagtaga
     3661 ttaagttgca gcagtagaat aatttgtaca ggtctacttg gatatgtttc ttgtacactt
     3721 atgattcttt aattaagttt tgatgtggaa aatggatggg aataaatgta aagcttgtta
     3781 tttttccatt aatattagtt ttttacttta
//
LOCUS       XM_071886441            3064 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TRANSPARENT TESTA
            GLABRA 1-like (LOC139904533), transcript variant X1, mRNA.
ACCESSION   XM_071886441
VERSION     XM_071886441.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3064
                     /gene="LOC139904533"
                     /note="protein TRANSPARENT TESTA GLABRA 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139904533"
     CDS             145..1173
                     /gene="LOC139904533"
                     /codon_start=1
                     /product="protein TRANSPARENT TESTA GLABRA 1-like"
                     /protein_id="XP_071742542.1"
                     /db_xref="GeneID:139904533"
                     /translation="MDTSTLESKIRSENFITYESPFTLYSMAISSTTTTTTRPSHRHI
                     AVGSFIEEFTNRIDILTFDQDTLTVKTNPNLSFDHPYPPTKLMFQPNPNSISSSDILA
                     SSGDFLRLYGLRNDTIEPISVLNNSKSSEFCAPLTSFDWNVIEPKRIGTSSIDTTCTI
                     WDIEKGVVETQLIAHDKEVHDIAWGEAGVFASVSADGSVRVFDLRDKEHSTIIYESPQ
                     PDTPLLRLAWNKQDLRYMATILMDSHKVVILDIRSPTLPVAELERHRGSVNAIAWAPM
                     SCQHICSAGDDSQALIWELPTVAGPNGIDPISMYSAGSEINQLQWSAAMPDWIGIAFA
                     NKMQLLKV"
     misc_feature    553..663
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <583..1035
                     /gene="LOC139904533"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    679..789
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    811..897
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    946..1023
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 gtcaacgcca gtcgtctctc gtggtcaaca ttttaaaaga atgcaactta ccctttattt
       61 ccatcttcac ttttcctcca ccacataacc acctgaaatt cccaattcca ccatcatctt
      121 ccatcgtcaa aattccctcc caaaatggac acatcaaccc tagaatcaaa gatccgatcc
      181 gaaaatttca tcacatacga gtcaccattc actctctact caatggccat cagttccacc
      241 accaccacca ccacccgccc atcccaccgt catatcgccg tcggcagctt catcgaagaa
      301 ttcactaatc gaatcgacat cttaacattc gatcaagaca ctttaactgt aaaaacaaac
      361 cctaatctct catttgatca cccttatcct ccaactaaac tcatgtttca accaaaccct
      421 aactcaattt catcatcaga tatcttagct tcatcaggtg acttcttacg tctctacgga
      481 ctccgtaacg atacaattga acctatttcc gtacttaata acagcaaaag tagtgagttt
      541 tgtgcacctt tgacttcgtt tgattggaac gtgatcgaac caaagcgaat cggtacgtct
      601 tccattgata ctacttgtac aatttgggat attgaaaaag gtgttgtgga aacacaattg
      661 attgctcatg ataaagaagt tcatgatatt gcttggggtg aagctggtgt gtttgcttcg
      721 gtttcggctg atggttcagt tagggttttc gatttacgcg ataaagaaca ttcgacgatt
      781 atatacgaaa gtcctcaacc ggatacacca ttgttaagat tagcttggaa taaacaggat
      841 ttgagatata tggctactat tttgatggat agtcataagg ttgtgattct tgatattagg
      901 tcacccacgt taccggttgc ggaattggag aggcatagag ggagtgtgaa cgcgattgcg
      961 tgggccccaa tgagttgtca gcatatttgt tcagccggtg atgattcgca ggcgcttatt
     1021 tgggaactac caactgtggc tggacctaat gggattgatc ctatatcgat gtattcagct
     1081 ggttcagaga ttaatcagct tcaatggtca gctgcaatgc ctgattggat tggtattgct
     1141 tttgcgaaca agatgcaact tttgaaagtt tgaggtagaa tctttaaatg cgttgaaatc
     1201 ggagacgata gcatttccct cacaccccca agatgcagat gatacgatat tcattgggag
     1261 gtggagctcg agaaacgtcc gaaacgtttt gaaacttctt gatagttttg aagaagcctc
     1321 ggtctaataa ataaacacac acaaaagtgt tgaaagtggc attggggtct cccaggagtg
     1381 cattaaacaa atggttgttt gcttgggttt ttaaaatggt actctagctt taacatacct
     1441 tggactcccg gtcaagttag agatgaataa gttgaaggat gggactccgg taattgataa
     1501 aatctagaaa agattatcgg atcggtaggc caagacgatg tccttcaatg gtcgtgtaac
     1561 actcattaac tcggctctct caagtctctt tttgtattat ttctctgtat tccgtgcacc
     1621 tctttgtgct atcaaccttc ttgaatcatt gtgacgtaac ttcttttggg taggtcgggt
     1681 tgggtgacaa atcaaaaatg ccttgggcta aatggggtta actgagatag tattttatac
     1741 cttatgaggg tgggggttga aatgtgggct ctttaaagcc taaaaatctt gcattattgg
     1801 gtaaatggtg gtggaagttc cgggtggaaa ccaatgcgtt ttgggtaaaa attatcgaga
     1861 gtattgacgg gtagatgggg attggggtgg ttgactgata acaagagttt tattgttaaa
     1921 tcaccatggc attctatcat aaatattaat catattattt cgtgcttcgg cttacacttt
     1981 aatgcttctt ttgtcaaaga aatcggatat ggtagggaga cgttaatata ggaggatcga
     2041 tggccaagtt tgggacgtct tatggacaaa tttccaaggc tatacagact tgaatcttgg
     2101 aagtcagcca ctgtatgcga catgatgcat tgggatagct ccacatggat tttcaattgg
     2161 caatggtcta gagatcttag agttgctggt gagctttctg agttggaatt actactttct
     2221 ttggtcccta gaaacggtct cctagcagcg atggtgtctt taaaacaaaa tcattaatat
     2281 gcctttaaga cgataatttg tcttcaagat aattcatcaa gtaacgaaac aatcaggaac
     2341 atactacctt cataaaaaat actatgaatt ttcgtgtggc attctcgaag aagaatactt
     2401 atagttggag ttgagcttga caagcaggaa ttgatcttct ctcggtcatt tgtcctatgt
     2461 gtgaagatga aattgaaacc gtggatcatt tcatttctat tatgtaagtt cacgatggat
     2521 tcatggcccg actttttgat tggtgggata ttggtccggg ttcgaatttg agcataacga
     2581 aattgtttca tggtagagga agatacattc gtatggctat caactagtct ttatggcaag
     2641 catgcgaatg ggtttgcgga tatctctctt ggaagaaacg taatcataaa gtgttcaggg
     2701 aaaaagtgtt atgtccggca ttgttatttg aaattcaagt taaaagctac gaatggatca
     2761 ctgaacgctt ctagaagatc acaataagat ggcaccaatg gctcacggat ctaaagtcgg
     2821 ttggctccaa taacagtgtg cgaacagttg taggttaact aaacatagtg tctattaatg
     2881 cagtaccttc gtttatgtgt tatgtatata aagttattag atatagatct ttgtatccat
     2941 ttagaattgt aatttatttc caaattgtta ttagataaat atggtaggga tttggacttg
     3001 ggcaacaagc tatacagccg acccattctt gtatatatag tcgatatgga ttaatgaaaa
     3061 gggc
//
LOCUS       XM_071886442            3151 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TRANSPARENT TESTA
            GLABRA 1-like (LOC139904533), transcript variant X2, mRNA.
ACCESSION   XM_071886442
VERSION     XM_071886442.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3151
                     /gene="LOC139904533"
                     /note="protein TRANSPARENT TESTA GLABRA 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139904533"
     CDS             145..1173
                     /gene="LOC139904533"
                     /codon_start=1
                     /product="protein TRANSPARENT TESTA GLABRA 1-like"
                     /protein_id="XP_071742543.1"
                     /db_xref="GeneID:139904533"
                     /translation="MDTSTLESKIRSENFITYESPFTLYSMAISSTTTTTTRPSHRHI
                     AVGSFIEEFTNRIDILTFDQDTLTVKTNPNLSFDHPYPPTKLMFQPNPNSISSSDILA
                     SSGDFLRLYGLRNDTIEPISVLNNSKSSEFCAPLTSFDWNVIEPKRIGTSSIDTTCTI
                     WDIEKGVVETQLIAHDKEVHDIAWGEAGVFASVSADGSVRVFDLRDKEHSTIIYESPQ
                     PDTPLLRLAWNKQDLRYMATILMDSHKVVILDIRSPTLPVAELERHRGSVNAIAWAPM
                     SCQHICSAGDDSQALIWELPTVAGPNGIDPISMYSAGSEINQLQWSAAMPDWIGIAFA
                     NKMQLLKV"
     misc_feature    553..663
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <583..1035
                     /gene="LOC139904533"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    679..789
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    811..897
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    946..1023
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 gtcaacgcca gtcgtctctc gtggtcaaca ttttaaaaga atgcaactta ccctttattt
       61 ccatcttcac ttttcctcca ccacataacc acctgaaatt cccaattcca ccatcatctt
      121 ccatcgtcaa aattccctcc caaaatggac acatcaaccc tagaatcaaa gatccgatcc
      181 gaaaatttca tcacatacga gtcaccattc actctctact caatggccat cagttccacc
      241 accaccacca ccacccgccc atcccaccgt catatcgccg tcggcagctt catcgaagaa
      301 ttcactaatc gaatcgacat cttaacattc gatcaagaca ctttaactgt aaaaacaaac
      361 cctaatctct catttgatca cccttatcct ccaactaaac tcatgtttca accaaaccct
      421 aactcaattt catcatcaga tatcttagct tcatcaggtg acttcttacg tctctacgga
      481 ctccgtaacg atacaattga acctatttcc gtacttaata acagcaaaag tagtgagttt
      541 tgtgcacctt tgacttcgtt tgattggaac gtgatcgaac caaagcgaat cggtacgtct
      601 tccattgata ctacttgtac aatttgggat attgaaaaag gtgttgtgga aacacaattg
      661 attgctcatg ataaagaagt tcatgatatt gcttggggtg aagctggtgt gtttgcttcg
      721 gtttcggctg atggttcagt tagggttttc gatttacgcg ataaagaaca ttcgacgatt
      781 atatacgaaa gtcctcaacc ggatacacca ttgttaagat tagcttggaa taaacaggat
      841 ttgagatata tggctactat tttgatggat agtcataagg ttgtgattct tgatattagg
      901 tcacccacgt taccggttgc ggaattggag aggcatagag ggagtgtgaa cgcgattgcg
      961 tgggccccaa tgagttgtca gcatatttgt tcagccggtg atgattcgca ggcgcttatt
     1021 tgggaactac caactgtggc tggacctaat gggattgatc ctatatcgat gtattcagct
     1081 ggttcagaga ttaatcagct tcaatggtca gctgcaatgc ctgattggat tggtattgct
     1141 tttgcgaaca agatgcaact tttgaaagtt tgaggtagaa tgactacctt ttgtacgaca
     1201 atctaggact aaacatactt gcttagtggg ctaaacatac ttgctaaggc cgcatgctcg
     1261 aatggcagct ttaaatgcgt tgaaatcgga gacgatagca tttccctcac acccccaaga
     1321 tgcagatgat acgatattca ttgggaggtg gagctcgaga aacgtccgaa acgttttgaa
     1381 acttcttgat agttttgaag aagcctcggt ctaataaata aacacacaca aaagtgttga
     1441 aagtggcatt ggggtctccc aggagtgcat taaacaaatg gttgtttgct tgggttttta
     1501 aaatggtact ctagctttaa cataccttgg actcccggtc aagttagaga tgaataagtt
     1561 gaaggatggg actccggtaa ttgataaaat ctagaaaaga ttatcggatc ggtaggccaa
     1621 gacgatgtcc ttcaatggtc gtgtaacact cattaactcg gctctctcaa gtctcttttt
     1681 gtattatttc tctgtattcc gtgcacctct ttgtgctatc aaccttcttg aatcattgtg
     1741 acgtaacttc ttttgggtag gtcgggttgg gtgacaaatc aaaaatgcct tgggctaaat
     1801 ggggttaact gagatagtat tttatacctt atgagggtgg gggttgaaat gtgggctctt
     1861 taaagcctaa aaatcttgca ttattgggta aatggtggtg gaagttccgg gtggaaacca
     1921 atgcgttttg ggtaaaaatt atcgagagta ttgacgggta gatggggatt ggggtggttg
     1981 actgataaca agagttttat tgttaaatca ccatggcatt ctatcataaa tattaatcat
     2041 attatttcgt gcttcggctt acactttaat gcttcttttg tcaaagaaat cggatatggt
     2101 agggagacgt taatatagga ggatcgatgg ccaagtttgg gacgtcttat ggacaaattt
     2161 ccaaggctat acagacttga atcttggaag tcagccactg tatgcgacat gatgcattgg
     2221 gatagctcca catggatttt caattggcaa tggtctagag atcttagagt tgctggtgag
     2281 ctttctgagt tggaattact actttctttg gtccctagaa acggtctcct agcagcgatg
     2341 gtgtctttaa aacaaaatca ttaatatgcc tttaagacga taatttgtct tcaagataat
     2401 tcatcaagta acgaaacaat caggaacata ctaccttcat aaaaaatact atgaattttc
     2461 gtgtggcatt ctcgaagaag aatacttata gttggagttg agcttgacaa gcaggaattg
     2521 atcttctctc ggtcatttgt cctatgtgtg aagatgaaat tgaaaccgtg gatcatttca
     2581 tttctattat gtaagttcac gatggattca tggcccgact ttttgattgg tgggatattg
     2641 gtccgggttc gaatttgagc ataacgaaat tgtttcatgg tagaggaaga tacattcgta
     2701 tggctatcaa ctagtcttta tggcaagcat gcgaatgggt ttgcggatat ctctcttgga
     2761 agaaacgtaa tcataaagtg ttcagggaaa aagtgttatg tccggcattg ttatttgaaa
     2821 ttcaagttaa aagctacgaa tggatcactg aacgcttcta gaagatcaca ataagatggc
     2881 accaatggct cacggatcta aagtcggttg gctccaataa cagtgtgcga acagttgtag
     2941 gttaactaaa catagtgtct attaatgcag taccttcgtt tatgtgttat gtatataaag
     3001 ttattagata tagatctttg tatccattta gaattgtaat ttatttccaa attgttatta
     3061 gataaatatg gtagggattt ggacttgggc aacaagctat acagccgacc cattcttgta
     3121 tatatagtcg atatggatta atgaaaaggg c
//
LOCUS       XR_011778855            2620 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TRANSPARENT TESTA
            GLABRA 1-like (LOC139904533), transcript variant X3, misc_RNA.
ACCESSION   XR_011778855
VERSION     XR_011778855.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2620
                     /gene="LOC139904533"
                     /note="protein TRANSPARENT TESTA GLABRA 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139904533"
     misc_RNA        1..2620
                     /gene="LOC139904533"
                     /product="protein TRANSPARENT TESTA GLABRA 1-like,
                     transcript variant X3"
                     /db_xref="GeneID:139904533"
ORIGIN      
        1 gtcaacgcca gtcgtctctc gtggtcaaca ttttaaaaga atgcaactta ccctttattt
       61 ccatcttcac ttttcctcca ccacataacc acctgaaatt cccaattcca ccatcatctt
      121 ccatcgtcaa aattccctcc caaaatggac acatcaaccc tagaatcaaa gatccgatcc
      181 gaaaatttca tcacatacga gtcaccattc actctctact caatggccat cagttccacc
      241 accaccacca ccacccgccc atcccaccgt catatcgccg tcggcagctt catcgaagaa
      301 ttcactaatc gaatcgacat cttaacattc gatcaagaca ctttaactgt aaaaacaaac
      361 cctaatctct catttgatca cccttatcct ccaactaaac tcatgtttca accaaaccct
      421 aactcaattt catcatcaga tatcttagct tcatcaggtg acttcttacg tctctacgga
      481 ctccgtaacg atacaattga acctatttcc gtacttaata acagcaaaag tagtgagttt
      541 tgtgcacctt tgacttcgtt tgattggaac gtgatcgaac caaagcgaat cggtacgtct
      601 tccattgata ctacttgtac aatttgggat attgaaaaag gtgttgtgga aacacaattg
      661 attgctcatg ataaagaagt tcatgatatt gcttggggtg aagctggtgt gtttgcttcg
      721 gtttcggctg atggttcagt tagggttttc gatttacgcg ataaagaaca ttcgacgatt
      781 atatacgaaa gtcctcaacc ggatacacca ttgttaagat tagcttggaa taaacaggat
      841 ttgagatata tggctactat tttgatggat agtcataagg ttgtgattct tgatattagg
      901 tcacccacgt taccggttgc ggaattggag aggcatagag ggagtgtgaa cgcgattgcg
      961 tgggccccaa tgagttgtca gcatatttgt tcagccggtg atgattcgca ggcgcttatt
     1021 tgggaactac caactgtggc tggacctaat gggattgatc ctatatcgat gtattcagct
     1081 ggttcagaga ttaatcagct tcaatggtca gctgcaatgc ctgattggat tggtattgct
     1141 tttgcgaaca agatgcaact tttgaaagtt tgaggtagaa tctttaaatg cgttgaaatc
     1201 ggagacgata gcatttccct cacaccccca agatgcagat gatacgatat tcattgggag
     1261 gtggagctcg agaaacgtcc gaaacgtttt gaaacttctt gatagttttg aagaagcctc
     1321 ggtctaataa ataaacacac acaaaagtgt tgaaagtggc attggggtct cccaggagtg
     1381 cattaaacaa atggttgttt gcttgggttt ttaaaatggt actctagctt taacatacct
     1441 tggactcccg gtcaagttag agatgaataa gttgaaggat gggactccgg taattgataa
     1501 aatctagaaa agattatcgg atcggtaggc caagacgatg tccttcaatg gtcgtaaatc
     1561 ggatatggta gggagacgtt aatataggag gatcgatggc caagtttggg acgtcttatg
     1621 gacaaatttc caaggctata cagacttgaa tcttggaagt cagccactgt atgcgacatg
     1681 atgcattggg atagctccac atggattttc aattggcaat ggtctagaga tcttagagtt
     1741 gctggtgagc tttctgagtt ggaattacta ctttctttgg tccctagaaa cggtctccta
     1801 gcagcgatgg tgtctttaaa acaaaatcat taatatgcct ttaagacgat aatttgtctt
     1861 caagataatt catcaagtaa cgaaacaatc aggaacatac taccttcata aaaaatacta
     1921 tgaattttcg tgtggcattc tcgaagaaga atacttatag ttggagttga gcttgacaag
     1981 caggaattga tcttctctcg gtcatttgtc ctatgtgtga agatgaaatt gaaaccgtgg
     2041 atcatttcat ttctattatg taagttcacg atggattcat ggcccgactt tttgattggt
     2101 gggatattgg tccgggttcg aatttgagca taacgaaatt gtttcatggt agaggaagat
     2161 acattcgtat ggctatcaac tagtctttat ggcaagcatg cgaatgggtt tgcggatatc
     2221 tctcttggaa gaaacgtaat cataaagtgt tcagggaaaa agtgttatgt ccggcattgt
     2281 tatttgaaat tcaagttaaa agctacgaat ggatcactga acgcttctag aagatcacaa
     2341 taagatggca ccaatggctc acggatctaa agtcggttgg ctccaataac agtgtgcgaa
     2401 cagttgtagg ttaactaaac atagtgtcta ttaatgcagt accttcgttt atgtgttatg
     2461 tatataaagt tattagatat agatctttgt atccatttag aattgtaatt tatttccaaa
     2521 ttgttattag ataaatatgg tagggatttg gacttgggca acaagctata cagccgaccc
     2581 attcttgtat atatagtcga tatggattaa tgaaaagggc
//
LOCUS       XM_071886443            2246 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TRANSPARENT TESTA
            GLABRA 1-like (LOC139904533), transcript variant X4, mRNA.
ACCESSION   XM_071886443
VERSION     XM_071886443.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2246
                     /gene="LOC139904533"
                     /note="protein TRANSPARENT TESTA GLABRA 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139904533"
     CDS             145..1173
                     /gene="LOC139904533"
                     /codon_start=1
                     /product="protein TRANSPARENT TESTA GLABRA 1-like"
                     /protein_id="XP_071742544.1"
                     /db_xref="GeneID:139904533"
                     /translation="MDTSTLESKIRSENFITYESPFTLYSMAISSTTTTTTRPSHRHI
                     AVGSFIEEFTNRIDILTFDQDTLTVKTNPNLSFDHPYPPTKLMFQPNPNSISSSDILA
                     SSGDFLRLYGLRNDTIEPISVLNNSKSSEFCAPLTSFDWNVIEPKRIGTSSIDTTCTI
                     WDIEKGVVETQLIAHDKEVHDIAWGEAGVFASVSADGSVRVFDLRDKEHSTIIYESPQ
                     PDTPLLRLAWNKQDLRYMATILMDSHKVVILDIRSPTLPVAELERHRGSVNAIAWAPM
                     SCQHICSAGDDSQALIWELPTVAGPNGIDPISMYSAGSEINQLQWSAAMPDWIGIAFA
                     NKMQLLKV"
     misc_feature    553..663
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <583..1035
                     /gene="LOC139904533"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    679..789
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    811..897
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    946..1023
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 gtcaacgcca gtcgtctctc gtggtcaaca ttttaaaaga atgcaactta ccctttattt
       61 ccatcttcac ttttcctcca ccacataacc acctgaaatt cccaattcca ccatcatctt
      121 ccatcgtcaa aattccctcc caaaatggac acatcaaccc tagaatcaaa gatccgatcc
      181 gaaaatttca tcacatacga gtcaccattc actctctact caatggccat cagttccacc
      241 accaccacca ccacccgccc atcccaccgt catatcgccg tcggcagctt catcgaagaa
      301 ttcactaatc gaatcgacat cttaacattc gatcaagaca ctttaactgt aaaaacaaac
      361 cctaatctct catttgatca cccttatcct ccaactaaac tcatgtttca accaaaccct
      421 aactcaattt catcatcaga tatcttagct tcatcaggtg acttcttacg tctctacgga
      481 ctccgtaacg atacaattga acctatttcc gtacttaata acagcaaaag tagtgagttt
      541 tgtgcacctt tgacttcgtt tgattggaac gtgatcgaac caaagcgaat cggtacgtct
      601 tccattgata ctacttgtac aatttgggat attgaaaaag gtgttgtgga aacacaattg
      661 attgctcatg ataaagaagt tcatgatatt gcttggggtg aagctggtgt gtttgcttcg
      721 gtttcggctg atggttcagt tagggttttc gatttacgcg ataaagaaca ttcgacgatt
      781 atatacgaaa gtcctcaacc ggatacacca ttgttaagat tagcttggaa taaacaggat
      841 ttgagatata tggctactat tttgatggat agtcataagg ttgtgattct tgatattagg
      901 tcacccacgt taccggttgc ggaattggag aggcatagag ggagtgtgaa cgcgattgcg
      961 tgggccccaa tgagttgtca gcatatttgt tcagccggtg atgattcgca ggcgcttatt
     1021 tgggaactac caactgtggc tggacctaat gggattgatc ctatatcgat gtattcagct
     1081 ggttcagaga ttaatcagct tcaatggtca gctgcaatgc ctgattggat tggtattgct
     1141 tttgcgaaca agatgcaact tttgaaagtt tgaggtagaa taaatcggat atggtaggga
     1201 gacgttaata taggaggatc gatggccaag tttgggacgt cttatggaca aatttccaag
     1261 gctatacaga cttgaatctt ggaagtcagc cactgtatgc gacatgatgc attgggatag
     1321 ctccacatgg attttcaatt ggcaatggtc tagagatctt agagttgctg gtgagctttc
     1381 tgagttggaa ttactacttt ctttggtccc tagaaacggt ctcctagcag cgatggtgtc
     1441 tttaaaacaa aatcattaat atgcctttaa gacgataatt tgtcttcaag ataattcatc
     1501 aagtaacgaa acaatcagga acatactacc ttcataaaaa atactatgaa ttttcgtgtg
     1561 gcattctcga agaagaatac ttatagttgg agttgagctt gacaagcagg aattgatctt
     1621 ctctcggtca tttgtcctat gtgtgaagat gaaattgaaa ccgtggatca tttcatttct
     1681 attatgtaag ttcacgatgg attcatggcc cgactttttg attggtggga tattggtccg
     1741 ggttcgaatt tgagcataac gaaattgttt catggtagag gaagatacat tcgtatggct
     1801 atcaactagt ctttatggca agcatgcgaa tgggtttgcg gatatctctc ttggaagaaa
     1861 cgtaatcata aagtgttcag ggaaaaagtg ttatgtccgg cattgttatt tgaaattcaa
     1921 gttaaaagct acgaatggat cactgaacgc ttctagaaga tcacaataag atggcaccaa
     1981 tggctcacgg atctaaagtc ggttggctcc aataacagtg tgcgaacagt tgtaggttaa
     2041 ctaaacatag tgtctattaa tgcagtacct tcgtttatgt gttatgtata taaagttatt
     2101 agatatagat ctttgtatcc atttagaatt gtaatttatt tccaaattgt tattagataa
     2161 atatggtagg gatttggact tgggcaacaa gctatacagc cgacccattc ttgtatatat
     2221 agtcgatatg gattaatgaa aagggc
//
LOCUS       XM_071886444            1480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TRANSPARENT TESTA
            GLABRA 1-like (LOC139904533), transcript variant X5, mRNA.
ACCESSION   XM_071886444
VERSION     XM_071886444.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1480
                     /gene="LOC139904533"
                     /note="protein TRANSPARENT TESTA GLABRA 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139904533"
     CDS             145..1173
                     /gene="LOC139904533"
                     /codon_start=1
                     /product="protein TRANSPARENT TESTA GLABRA 1-like"
                     /protein_id="XP_071742545.1"
                     /db_xref="GeneID:139904533"
                     /translation="MDTSTLESKIRSENFITYESPFTLYSMAISSTTTTTTRPSHRHI
                     AVGSFIEEFTNRIDILTFDQDTLTVKTNPNLSFDHPYPPTKLMFQPNPNSISSSDILA
                     SSGDFLRLYGLRNDTIEPISVLNNSKSSEFCAPLTSFDWNVIEPKRIGTSSIDTTCTI
                     WDIEKGVVETQLIAHDKEVHDIAWGEAGVFASVSADGSVRVFDLRDKEHSTIIYESPQ
                     PDTPLLRLAWNKQDLRYMATILMDSHKVVILDIRSPTLPVAELERHRGSVNAIAWAPM
                     SCQHICSAGDDSQALIWELPTVAGPNGIDPISMYSAGSEINQLQWSAAMPDWIGIAFA
                     NKMQLLKV"
     misc_feature    553..663
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <583..1035
                     /gene="LOC139904533"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    679..789
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    811..897
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    946..1023
                     /gene="LOC139904533"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 gtcaacgcca gtcgtctctc gtggtcaaca ttttaaaaga atgcaactta ccctttattt
       61 ccatcttcac ttttcctcca ccacataacc acctgaaatt cccaattcca ccatcatctt
      121 ccatcgtcaa aattccctcc caaaatggac acatcaaccc tagaatcaaa gatccgatcc
      181 gaaaatttca tcacatacga gtcaccattc actctctact caatggccat cagttccacc
      241 accaccacca ccacccgccc atcccaccgt catatcgccg tcggcagctt catcgaagaa
      301 ttcactaatc gaatcgacat cttaacattc gatcaagaca ctttaactgt aaaaacaaac
      361 cctaatctct catttgatca cccttatcct ccaactaaac tcatgtttca accaaaccct
      421 aactcaattt catcatcaga tatcttagct tcatcaggtg acttcttacg tctctacgga
      481 ctccgtaacg atacaattga acctatttcc gtacttaata acagcaaaag tagtgagttt
      541 tgtgcacctt tgacttcgtt tgattggaac gtgatcgaac caaagcgaat cggtacgtct
      601 tccattgata ctacttgtac aatttgggat attgaaaaag gtgttgtgga aacacaattg
      661 attgctcatg ataaagaagt tcatgatatt gcttggggtg aagctggtgt gtttgcttcg
      721 gtttcggctg atggttcagt tagggttttc gatttacgcg ataaagaaca ttcgacgatt
      781 atatacgaaa gtcctcaacc ggatacacca ttgttaagat tagcttggaa taaacaggat
      841 ttgagatata tggctactat tttgatggat agtcataagg ttgtgattct tgatattagg
      901 tcacccacgt taccggttgc ggaattggag aggcatagag ggagtgtgaa cgcgattgcg
      961 tgggccccaa tgagttgtca gcatatttgt tcagccggtg atgattcgca ggcgcttatt
     1021 tgggaactac caactgtggc tggacctaat gggattgatc ctatatcgat gtattcagct
     1081 ggttcagaga ttaatcagct tcaatggtca gctgcaatgc ctgattggat tggtattgct
     1141 tttgcgaaca agatgcaact tttgaaagtt tgaggtagaa tgcatgaaaa aatttacggt
     1201 aattgaagat gatggatgga ttagttgatt cgttctctct ggataatttg gaagaaaaaa
     1261 aaaacaaaca tatcgtttta tgttactagc ttacatatca ttttcttcta ttatttaaca
     1321 taaaattccc agtttagatt acatctcgtt ttgttattcg gatactcaag gctcggtttg
     1381 gttagttttt ggttcttgtt tagtggtagg gtttcgtttt ctgcttccaa gccttgtagc
     1441 gttttcgatt cttttgtatg ttgtcttttc atctattgat
//
LOCUS       XM_071886445            2534 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase BLUS1-like (LOC139904534), transcript variant X1, mRNA.
ACCESSION   XM_071886445
VERSION     XM_071886445.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2534
                     /gene="LOC139904534"
                     /note="serine/threonine-protein kinase BLUS1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139904534"
     CDS             256..2229
                     /gene="LOC139904534"
                     /codon_start=1
                     /product="serine/threonine-protein kinase BLUS1-like
                     isoform X1"
                     /protein_id="XP_071742546.1"
                     /db_xref="GeneID:139904534"
                     /translation="MEKKKYPVGAENYVLYEEVGQGVSASVFRAMCIPNNEIVAIKIL
                     DFERANSDLNNISREAQTMILVDHPNVLKSHCSFVNDHNLWVVMPFMPGGSCLHILKS
                     AHPEGFEEVVIATILREVLKALEYLHHHGLIHRDVKAGNVLICESGDIKLGDLGVSAC
                     LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKY
                     PPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPLKRPSAKRLLKHSFFKQ
                     AKSNEFIARKLLEGLPTLGDRIQALKKKEEEMLVQKKIPDGQKEEMSQNEYKRGISGW
                     NFDLEDLKEKASLVHDEETTSDINGTGTGEKELVHPLSYVAEASRTRDVESTSAVNSS
                     ASSSGGKCDSSTNGHPSPRSSISNAEDCNKSDFDEHNLDISTVSTNGVASHPHSGESS
                     PRGITVDDCKLKGQVPVVPSSNGSQSLQITDGVTSESMPKATKTTLTSDEQDEKARSN
                     IIKQKGRFKVTSETAEPDKGTSSPALLKSPSMRVMMEHPIALHLSQGDATSMPQNQTT
                     HYPPSVQQTSNHQRNGISSSKKQVSSTDTTANSSIDVECTATNITRLEKSKLEATDDR
                     EKELLNEITDLHRRLLYAQEELQKYKAGNAQAS"
     misc_feature    286..1077
                     /gene="LOC139904534"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Oxidative stress response kinase and Ste20-related proline
                     alanine-rich kinase; Region: STKc_OSR1_SPAK; cd06610"
                     /db_xref="CDD:270787"
     misc_feature    order(310..324,334..336,373..375,379..381,469..471,
                     517..528,535..540,547..549,661..663,667..678,682..684,
                     712..717,724..726,775..786,790..792,874..876,901..903)
                     /gene="LOC139904534"
                     /note="active site"
                     /db_xref="CDD:270787"
     misc_feature    order(310..324,334..336,373..375,379..381,469..471,
                     517..528,535..540,547..549,667..669,673..678,682..684,
                     715..717)
                     /gene="LOC139904534"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(319..324,661..663,667..675,724..726,775..786,
                     790..792,874..876,901..903)
                     /gene="LOC139904534"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(664..669,739..747,778..819,823..831,841..843,
                     850..855,862..867,874..876,892..894,913..915,922..930,
                     934..939,1024..1026,1030..1035,1039..1041)
                     /gene="LOC139904534"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(712..753,766..792)
                     /gene="LOC139904534"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270787"
ORIGIN      
        1 cgtcaccgtc accgtcttca tctctgttac aacacatttc ttcaatttca ctcataccat
       61 tacagttatt aatcaaatca aatggaccta aagtcaattc ctagaaatta ttgtagaata
      121 cggattcgaa gatcacctga aagctgcatc tgcgtattgt tcgatgttca atagacttca
      181 attctgttta aacaaataat aaacattata aaatattatt attattttta ttattatttg
      241 aaataacatt cacaaatgga gaagaaaaag tatccagttg gtgctgaaaa ctatgtgctg
      301 tatgaggagg taggacaagg tgttagtgct tccgtttttc gagctatgtg tattccgaat
      361 aacgagatcg ttgcgatcaa aattctcgat tttgaacgtg ccaatagtga tctgaacaat
      421 atatcacgtg aagctcagac gatgatcttg gttgatcatc caaatgttct taaatcacat
      481 tgttcctttg tgaacgacca taacctatgg gttgtcatgc catttatgcc tggtggctct
      541 tgccttcata tactgaagtc tgctcatcct gagggttttg aggaagttgt tattgcaact
      601 atactgcgtg aggtattaaa agcactggag tatcttcacc atcatggcct cattcatcga
      661 gatgttaagg ctggtaacgt tctcatctgt gagagcggtg acatcaagct gggagatctc
      721 ggtgtttctg cttgtctatt cgattccggc gatagacagc gcatgcgtaa tacatttgtt
      781 gggacaccat gctggatggc acctgaggtc atggaacaat tgcatggcta tgactttaag
      841 gctgatatct ggtctttcgg cataacagct ttggagcttg ctcacgggca tgctcctttc
      901 tcaaaatatc ctccaatgaa ggttttgctc atgacgttgc aaaatgcacc tccaggtctt
      961 gattatgaga gggacaagaa gttctcaaag tcttttaagc agatgattgc gagttgcttg
     1021 gttaaagatc ctttaaaacg tccttctgcc aaacggcttc tgaagcattc ttttttcaaa
     1081 caagcaaaat ctaatgagtt tatagcacgt aagctattag aagggctgcc aactcttggt
     1141 gaccggatcc aggcattgaa gaaaaaggaa gaagaaatgc ttgtgcaaaa gaaaatacca
     1201 gatggacaga aggaggaaat gtctcagaat gaatataaaa gaggtattag cggctggaac
     1261 ttcgaccttg aagatctgaa agaaaaggct tcattggtcc acgatgaaga gactacatct
     1321 gacattaatg ggactggtac tggtgaaaaa gagcttgtgc atccgttgtc atatgtggcc
     1381 gaggcttcaa gaactagaga tgtggaatct acttcagctg tcaactcttc tgcgtcatcc
     1441 tctggaggca aatgtgacag ttccacaaat ggacacccga gtccgcggag ttctatttca
     1501 aatgctgaag attgcaacaa gagtgatttt gatgaacaca acttggatat cagtacagta
     1561 tccactaatg gtgttgcatc tcatcctcac agtggggaat cttcacctag aggcattaca
     1621 gtggatgact gcaagttaaa aggccaggtt cctgttgtcc ctagctccaa tggatctcag
     1681 tcacttcaga taacagatgg ggtcacgtct gagtccatgc ctaaagctac caaaacaaca
     1741 ttaactagtg atgaacaaga tgagaaagca aggtccaata taattaaaca aaaagggcgt
     1801 ttcaaagtta cctctgagac tgctgaaccc gacaagggaa cttcatctcc tgcactacta
     1861 aagagtccga gcatgcgggt aatgatggaa catcctattg ctcttcattt gtctcaaggt
     1921 gatgctacat ccatgccaca gaatcaaact acccattacc caccctcagt tcagcagaca
     1981 agtaatcatc aaaggaatgg catttcaagt tccaagaagc aagtttcatc tactgacact
     2041 acagccaaca gcagcataga tgtagagtgc acagcaacca acatcactag actagaaaaa
     2101 tcaaagctag aggcaaccga tgatagggaa aaggaattac ttaatgagat aaccgattta
     2161 catcggaggc tgttatacgc acaggaggag ctccagaaat ataaagctgg aaatgcccag
     2221 gcgtcatgaa tcatgagttg tatcacacat caaccgccac ctaaatggat ggaacatttt
     2281 tcatccaaga ttaaagacaa agtgaaaaag ttcaaatttg ttcatgcgca tatacgtaat
     2341 tttggttatt aattttttta ggcttgtatc gtagattttt acgtctaatt tggcttttac
     2401 tttctaagca attgagatag gttgaccctg tttgagggtg tttgtatttt agtttgaacg
     2461 caacccaacc gttgttttcc tatatgaatt gatgcaaata gtcgcatcgc acgttgtaat
     2521 ttttaaagta atgt
//
LOCUS       XM_071886446            2491 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase BLUS1-like (LOC139904534), transcript variant X2, mRNA.
ACCESSION   XM_071886446
VERSION     XM_071886446.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2491
                     /gene="LOC139904534"
                     /note="serine/threonine-protein kinase BLUS1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139904534"
     CDS             213..2186
                     /gene="LOC139904534"
                     /codon_start=1
                     /product="serine/threonine-protein kinase BLUS1-like
                     isoform X1"
                     /protein_id="XP_071742547.1"
                     /db_xref="GeneID:139904534"
                     /translation="MEKKKYPVGAENYVLYEEVGQGVSASVFRAMCIPNNEIVAIKIL
                     DFERANSDLNNISREAQTMILVDHPNVLKSHCSFVNDHNLWVVMPFMPGGSCLHILKS
                     AHPEGFEEVVIATILREVLKALEYLHHHGLIHRDVKAGNVLICESGDIKLGDLGVSAC
                     LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKY
                     PPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPLKRPSAKRLLKHSFFKQ
                     AKSNEFIARKLLEGLPTLGDRIQALKKKEEEMLVQKKIPDGQKEEMSQNEYKRGISGW
                     NFDLEDLKEKASLVHDEETTSDINGTGTGEKELVHPLSYVAEASRTRDVESTSAVNSS
                     ASSSGGKCDSSTNGHPSPRSSISNAEDCNKSDFDEHNLDISTVSTNGVASHPHSGESS
                     PRGITVDDCKLKGQVPVVPSSNGSQSLQITDGVTSESMPKATKTTLTSDEQDEKARSN
                     IIKQKGRFKVTSETAEPDKGTSSPALLKSPSMRVMMEHPIALHLSQGDATSMPQNQTT
                     HYPPSVQQTSNHQRNGISSSKKQVSSTDTTANSSIDVECTATNITRLEKSKLEATDDR
                     EKELLNEITDLHRRLLYAQEELQKYKAGNAQAS"
     misc_feature    243..1034
                     /gene="LOC139904534"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Oxidative stress response kinase and Ste20-related proline
                     alanine-rich kinase; Region: STKc_OSR1_SPAK; cd06610"
                     /db_xref="CDD:270787"
     misc_feature    order(267..281,291..293,330..332,336..338,426..428,
                     474..485,492..497,504..506,618..620,624..635,639..641,
                     669..674,681..683,732..743,747..749,831..833,858..860)
                     /gene="LOC139904534"
                     /note="active site"
                     /db_xref="CDD:270787"
     misc_feature    order(267..281,291..293,330..332,336..338,426..428,
                     474..485,492..497,504..506,624..626,630..635,639..641,
                     672..674)
                     /gene="LOC139904534"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(276..281,618..620,624..632,681..683,732..743,
                     747..749,831..833,858..860)
                     /gene="LOC139904534"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(621..626,696..704,735..776,780..788,798..800,
                     807..812,819..824,831..833,849..851,870..872,879..887,
                     891..896,981..983,987..992,996..998)
                     /gene="LOC139904534"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(669..710,723..749)
                     /gene="LOC139904534"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270787"
ORIGIN      
        1 ttattaatca aatcaaatgg acctaaagtc aattcctgtg agcttttccg ttctattaca
       61 gaaattattg tagaatacgg attcgaagat cacctgaaag ctgcatctgc gtattgttcg
      121 atgttcaata gacttcaatt ctgtttaaac aaataataaa cattataaaa tattattatt
      181 atttttatta ttatttgaaa taacattcac aaatggagaa gaaaaagtat ccagttggtg
      241 ctgaaaacta tgtgctgtat gaggaggtag gacaaggtgt tagtgcttcc gtttttcgag
      301 ctatgtgtat tccgaataac gagatcgttg cgatcaaaat tctcgatttt gaacgtgcca
      361 atagtgatct gaacaatata tcacgtgaag ctcagacgat gatcttggtt gatcatccaa
      421 atgttcttaa atcacattgt tcctttgtga acgaccataa cctatgggtt gtcatgccat
      481 ttatgcctgg tggctcttgc cttcatatac tgaagtctgc tcatcctgag ggttttgagg
      541 aagttgttat tgcaactata ctgcgtgagg tattaaaagc actggagtat cttcaccatc
      601 atggcctcat tcatcgagat gttaaggctg gtaacgttct catctgtgag agcggtgaca
      661 tcaagctggg agatctcggt gtttctgctt gtctattcga ttccggcgat agacagcgca
      721 tgcgtaatac atttgttggg acaccatgct ggatggcacc tgaggtcatg gaacaattgc
      781 atggctatga ctttaaggct gatatctggt ctttcggcat aacagctttg gagcttgctc
      841 acgggcatgc tcctttctca aaatatcctc caatgaaggt tttgctcatg acgttgcaaa
      901 atgcacctcc aggtcttgat tatgagaggg acaagaagtt ctcaaagtct tttaagcaga
      961 tgattgcgag ttgcttggtt aaagatcctt taaaacgtcc ttctgccaaa cggcttctga
     1021 agcattcttt tttcaaacaa gcaaaatcta atgagtttat agcacgtaag ctattagaag
     1081 ggctgccaac tcttggtgac cggatccagg cattgaagaa aaaggaagaa gaaatgcttg
     1141 tgcaaaagaa aataccagat ggacagaagg aggaaatgtc tcagaatgaa tataaaagag
     1201 gtattagcgg ctggaacttc gaccttgaag atctgaaaga aaaggcttca ttggtccacg
     1261 atgaagagac tacatctgac attaatggga ctggtactgg tgaaaaagag cttgtgcatc
     1321 cgttgtcata tgtggccgag gcttcaagaa ctagagatgt ggaatctact tcagctgtca
     1381 actcttctgc gtcatcctct ggaggcaaat gtgacagttc cacaaatgga cacccgagtc
     1441 cgcggagttc tatttcaaat gctgaagatt gcaacaagag tgattttgat gaacacaact
     1501 tggatatcag tacagtatcc actaatggtg ttgcatctca tcctcacagt ggggaatctt
     1561 cacctagagg cattacagtg gatgactgca agttaaaagg ccaggttcct gttgtcccta
     1621 gctccaatgg atctcagtca cttcagataa cagatggggt cacgtctgag tccatgccta
     1681 aagctaccaa aacaacatta actagtgatg aacaagatga gaaagcaagg tccaatataa
     1741 ttaaacaaaa agggcgtttc aaagttacct ctgagactgc tgaacccgac aagggaactt
     1801 catctcctgc actactaaag agtccgagca tgcgggtaat gatggaacat cctattgctc
     1861 ttcatttgtc tcaaggtgat gctacatcca tgccacagaa tcaaactacc cattacccac
     1921 cctcagttca gcagacaagt aatcatcaaa ggaatggcat ttcaagttcc aagaagcaag
     1981 tttcatctac tgacactaca gccaacagca gcatagatgt agagtgcaca gcaaccaaca
     2041 tcactagact agaaaaatca aagctagagg caaccgatga tagggaaaag gaattactta
     2101 atgagataac cgatttacat cggaggctgt tatacgcaca ggaggagctc cagaaatata
     2161 aagctggaaa tgcccaggcg tcatgaatca tgagttgtat cacacatcaa ccgccaccta
     2221 aatggatgga acatttttca tccaagatta aagacaaagt gaaaaagttc aaatttgttc
     2281 atgcgcatat acgtaatttt ggttattaat ttttttaggc ttgtatcgta gatttttacg
     2341 tctaatttgg cttttacttt ctaagcaatt gagataggtt gaccctgttt gagggtgttt
     2401 gtattttagt ttgaacgcaa cccaaccgtt gttttcctat atgaattgat gcaaatagtc
     2461 gcatcgcacg ttgtaatttt taaagtaatg t
//
LOCUS       XM_071886447            2470 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase BLUS1-like (LOC139904534), transcript variant X3, mRNA.
ACCESSION   XM_071886447
VERSION     XM_071886447.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2470
                     /gene="LOC139904534"
                     /note="serine/threonine-protein kinase BLUS1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139904534"
     CDS             192..2165
                     /gene="LOC139904534"
                     /codon_start=1
                     /product="serine/threonine-protein kinase BLUS1-like
                     isoform X1"
                     /protein_id="XP_071742548.1"
                     /db_xref="GeneID:139904534"
                     /translation="MEKKKYPVGAENYVLYEEVGQGVSASVFRAMCIPNNEIVAIKIL
                     DFERANSDLNNISREAQTMILVDHPNVLKSHCSFVNDHNLWVVMPFMPGGSCLHILKS
                     AHPEGFEEVVIATILREVLKALEYLHHHGLIHRDVKAGNVLICESGDIKLGDLGVSAC
                     LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKY
                     PPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPLKRPSAKRLLKHSFFKQ
                     AKSNEFIARKLLEGLPTLGDRIQALKKKEEEMLVQKKIPDGQKEEMSQNEYKRGISGW
                     NFDLEDLKEKASLVHDEETTSDINGTGTGEKELVHPLSYVAEASRTRDVESTSAVNSS
                     ASSSGGKCDSSTNGHPSPRSSISNAEDCNKSDFDEHNLDISTVSTNGVASHPHSGESS
                     PRGITVDDCKLKGQVPVVPSSNGSQSLQITDGVTSESMPKATKTTLTSDEQDEKARSN
                     IIKQKGRFKVTSETAEPDKGTSSPALLKSPSMRVMMEHPIALHLSQGDATSMPQNQTT
                     HYPPSVQQTSNHQRNGISSSKKQVSSTDTTANSSIDVECTATNITRLEKSKLEATDDR
                     EKELLNEITDLHRRLLYAQEELQKYKAGNAQAS"
     misc_feature    222..1013
                     /gene="LOC139904534"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Oxidative stress response kinase and Ste20-related proline
                     alanine-rich kinase; Region: STKc_OSR1_SPAK; cd06610"
                     /db_xref="CDD:270787"
     misc_feature    order(246..260,270..272,309..311,315..317,405..407,
                     453..464,471..476,483..485,597..599,603..614,618..620,
                     648..653,660..662,711..722,726..728,810..812,837..839)
                     /gene="LOC139904534"
                     /note="active site"
                     /db_xref="CDD:270787"
     misc_feature    order(246..260,270..272,309..311,315..317,405..407,
                     453..464,471..476,483..485,603..605,609..614,618..620,
                     651..653)
                     /gene="LOC139904534"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(255..260,597..599,603..611,660..662,711..722,
                     726..728,810..812,837..839)
                     /gene="LOC139904534"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(600..605,675..683,714..755,759..767,777..779,
                     786..791,798..803,810..812,828..830,849..851,858..866,
                     870..875,960..962,966..971,975..977)
                     /gene="LOC139904534"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(648..689,702..728)
                     /gene="LOC139904534"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270787"
ORIGIN      
        1 ttaatgatat ttatgcggtg ttttgttttt ctctgaagag aaattattgt agaatacgga
       61 ttcgaagatc acctgaaagc tgcatctgcg tattgttcga tgttcaatag acttcaattc
      121 tgtttaaaca aataataaac attataaaat attattatta tttttattat tatttgaaat
      181 aacattcaca aatggagaag aaaaagtatc cagttggtgc tgaaaactat gtgctgtatg
      241 aggaggtagg acaaggtgtt agtgcttccg tttttcgagc tatgtgtatt ccgaataacg
      301 agatcgttgc gatcaaaatt ctcgattttg aacgtgccaa tagtgatctg aacaatatat
      361 cacgtgaagc tcagacgatg atcttggttg atcatccaaa tgttcttaaa tcacattgtt
      421 cctttgtgaa cgaccataac ctatgggttg tcatgccatt tatgcctggt ggctcttgcc
      481 ttcatatact gaagtctgct catcctgagg gttttgagga agttgttatt gcaactatac
      541 tgcgtgaggt attaaaagca ctggagtatc ttcaccatca tggcctcatt catcgagatg
      601 ttaaggctgg taacgttctc atctgtgaga gcggtgacat caagctggga gatctcggtg
      661 tttctgcttg tctattcgat tccggcgata gacagcgcat gcgtaataca tttgttggga
      721 caccatgctg gatggcacct gaggtcatgg aacaattgca tggctatgac tttaaggctg
      781 atatctggtc tttcggcata acagctttgg agcttgctca cgggcatgct cctttctcaa
      841 aatatcctcc aatgaaggtt ttgctcatga cgttgcaaaa tgcacctcca ggtcttgatt
      901 atgagaggga caagaagttc tcaaagtctt ttaagcagat gattgcgagt tgcttggtta
      961 aagatccttt aaaacgtcct tctgccaaac ggcttctgaa gcattctttt ttcaaacaag
     1021 caaaatctaa tgagtttata gcacgtaagc tattagaagg gctgccaact cttggtgacc
     1081 ggatccaggc attgaagaaa aaggaagaag aaatgcttgt gcaaaagaaa ataccagatg
     1141 gacagaagga ggaaatgtct cagaatgaat ataaaagagg tattagcggc tggaacttcg
     1201 accttgaaga tctgaaagaa aaggcttcat tggtccacga tgaagagact acatctgaca
     1261 ttaatgggac tggtactggt gaaaaagagc ttgtgcatcc gttgtcatat gtggccgagg
     1321 cttcaagaac tagagatgtg gaatctactt cagctgtcaa ctcttctgcg tcatcctctg
     1381 gaggcaaatg tgacagttcc acaaatggac acccgagtcc gcggagttct atttcaaatg
     1441 ctgaagattg caacaagagt gattttgatg aacacaactt ggatatcagt acagtatcca
     1501 ctaatggtgt tgcatctcat cctcacagtg gggaatcttc acctagaggc attacagtgg
     1561 atgactgcaa gttaaaaggc caggttcctg ttgtccctag ctccaatgga tctcagtcac
     1621 ttcagataac agatggggtc acgtctgagt ccatgcctaa agctaccaaa acaacattaa
     1681 ctagtgatga acaagatgag aaagcaaggt ccaatataat taaacaaaaa gggcgtttca
     1741 aagttacctc tgagactgct gaacccgaca agggaacttc atctcctgca ctactaaaga
     1801 gtccgagcat gcgggtaatg atggaacatc ctattgctct tcatttgtct caaggtgatg
     1861 ctacatccat gccacagaat caaactaccc attacccacc ctcagttcag cagacaagta
     1921 atcatcaaag gaatggcatt tcaagttcca agaagcaagt ttcatctact gacactacag
     1981 ccaacagcag catagatgta gagtgcacag caaccaacat cactagacta gaaaaatcaa
     2041 agctagaggc aaccgatgat agggaaaagg aattacttaa tgagataacc gatttacatc
     2101 ggaggctgtt atacgcacag gaggagctcc agaaatataa agctggaaat gcccaggcgt
     2161 catgaatcat gagttgtatc acacatcaac cgccacctaa atggatggaa catttttcat
     2221 ccaagattaa agacaaagtg aaaaagttca aatttgttca tgcgcatata cgtaattttg
     2281 gttattaatt tttttaggct tgtatcgtag atttttacgt ctaatttggc ttttactttc
     2341 taagcaattg agataggttg accctgtttg agggtgtttg tattttagtt tgaacgcaac
     2401 ccaaccgttg ttttcctata tgaattgatg caaatagtcg catcgcacgt tgtaattttt
     2461 aaagtaatgt
//
LOCUS       XM_071886448            2522 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase BLUS1-like (LOC139904534), transcript variant X4, mRNA.
ACCESSION   XM_071886448
VERSION     XM_071886448.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2522
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2522
                     /gene="LOC139904534"
                     /note="serine/threonine-protein kinase BLUS1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139904534"
     CDS             258..2216
                     /gene="LOC139904534"
                     /codon_start=1
                     /product="serine/threonine-protein kinase BLUS1-like
                     isoform X2"
                     /protein_id="XP_071742549.1"
                     /db_xref="GeneID:139904534"
                     /translation="MEKKKYPVGAENYVLYEEVGQGVSASVFRAMCIPNNEIVAIKIL
                     DFERANSDLNNISREAQTMILVDHPNVLKSHCSFVNDHNLWVVMPFMPGGSCLHILKS
                     AHPEGFEEVVIATILREVLKALEYLHHHGLIHRDVKAGNVLICESGDIKLGDLGVSAC
                     LFDSGDRQRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKY
                     PPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPLKRPSAKRLLKHSFFKQ
                     AKSNEFIARKLLEGLPTLGDRIQALKKKEEEMLVQKKIPDGQKEEMSQNEYKRGISGW
                     NFDLEDLKEKASLVHDEETTSDINGTGTGEKELVHPLSYVAEASRTRDVESTSAVNSS
                     ASSSGSTNGHPSPRSSISNAEDCNKSDFDEHNLDISTVSTNGVASHPHSGESSPRGIT
                     VDDCKLKGQVPVVPSSNGSQSLQITDGVTSESMPKATKTTLTSDEQDEKARSNIIKQK
                     GRFKVTSETAEPDKGTSSPALLKSPSMRVMMEHPIALHLSQGDATSMPQNQTTHYPPS
                     VQQTSNHQRNGISSSKKQVSSTDTTANSSIDVECTATNITRLEKSKLEATDDREKELL
                     NEITDLHRRLLYAQEELQKYKAGNAQAS"
     misc_feature    288..1079
                     /gene="LOC139904534"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Oxidative stress response kinase and Ste20-related proline
                     alanine-rich kinase; Region: STKc_OSR1_SPAK; cd06610"
                     /db_xref="CDD:270787"
     misc_feature    order(312..326,336..338,375..377,381..383,471..473,
                     519..530,537..542,549..551,663..665,669..680,684..686,
                     714..719,726..728,777..788,792..794,876..878,903..905)
                     /gene="LOC139904534"
                     /note="active site"
                     /db_xref="CDD:270787"
     misc_feature    order(312..326,336..338,375..377,381..383,471..473,
                     519..530,537..542,549..551,669..671,675..680,684..686,
                     717..719)
                     /gene="LOC139904534"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(321..326,663..665,669..677,726..728,777..788,
                     792..794,876..878,903..905)
                     /gene="LOC139904534"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(666..671,741..749,780..821,825..833,843..845,
                     852..857,864..869,876..878,894..896,915..917,924..932,
                     936..941,1026..1028,1032..1037,1041..1043)
                     /gene="LOC139904534"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:270787"
     misc_feature    order(714..755,768..794)
                     /gene="LOC139904534"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270787"
ORIGIN      
        1 accgtcaccg tcaccgtctt catctctgtt acaacacatt tcttcaattt cactcatacc
       61 attacagtta ttaatcaaat caaatggacc taaagtcaat tcctagaaat tattgtagaa
      121 tacggattcg aagatcacct gaaagctgca tctgcgtatt gttcgatgtt caatagactt
      181 caattctgtt taaacaaata ataaacatta taaaatatta ttattatttt tattattatt
      241 tgaaataaca ttcacaaatg gagaagaaaa agtatccagt tggtgctgaa aactatgtgc
      301 tgtatgagga ggtaggacaa ggtgttagtg cttccgtttt tcgagctatg tgtattccga
      361 ataacgagat cgttgcgatc aaaattctcg attttgaacg tgccaatagt gatctgaaca
      421 atatatcacg tgaagctcag acgatgatct tggttgatca tccaaatgtt cttaaatcac
      481 attgttcctt tgtgaacgac cataacctat gggttgtcat gccatttatg cctggtggct
      541 cttgccttca tatactgaag tctgctcatc ctgagggttt tgaggaagtt gttattgcaa
      601 ctatactgcg tgaggtatta aaagcactgg agtatcttca ccatcatggc ctcattcatc
      661 gagatgttaa ggctggtaac gttctcatct gtgagagcgg tgacatcaag ctgggagatc
      721 tcggtgtttc tgcttgtcta ttcgattccg gcgatagaca gcgcatgcgt aatacatttg
      781 ttgggacacc atgctggatg gcacctgagg tcatggaaca attgcatggc tatgacttta
      841 aggctgatat ctggtctttc ggcataacag ctttggagct tgctcacggg catgctcctt
      901 tctcaaaata tcctccaatg aaggttttgc tcatgacgtt gcaaaatgca cctccaggtc
      961 ttgattatga gagggacaag aagttctcaa agtcttttaa gcagatgatt gcgagttgct
     1021 tggttaaaga tcctttaaaa cgtccttctg ccaaacggct tctgaagcat tcttttttca
     1081 aacaagcaaa atctaatgag tttatagcac gtaagctatt agaagggctg ccaactcttg
     1141 gtgaccggat ccaggcattg aagaaaaagg aagaagaaat gcttgtgcaa aagaaaatac
     1201 cagatggaca gaaggaggaa atgtctcaga atgaatataa aagaggtatt agcggctgga
     1261 acttcgacct tgaagatctg aaagaaaagg cttcattggt ccacgatgaa gagactacat
     1321 ctgacattaa tgggactggt actggtgaaa aagagcttgt gcatccgttg tcatatgtgg
     1381 ccgaggcttc aagaactaga gatgtggaat ctacttcagc tgtcaactct tctgcgtcat
     1441 cctctggttc cacaaatgga cacccgagtc cgcggagttc tatttcaaat gctgaagatt
     1501 gcaacaagag tgattttgat gaacacaact tggatatcag tacagtatcc actaatggtg
     1561 ttgcatctca tcctcacagt ggggaatctt cacctagagg cattacagtg gatgactgca
     1621 agttaaaagg ccaggttcct gttgtcccta gctccaatgg atctcagtca cttcagataa
     1681 cagatggggt cacgtctgag tccatgccta aagctaccaa aacaacatta actagtgatg
     1741 aacaagatga gaaagcaagg tccaatataa ttaaacaaaa agggcgtttc aaagttacct
     1801 ctgagactgc tgaacccgac aagggaactt catctcctgc actactaaag agtccgagca
     1861 tgcgggtaat gatggaacat cctattgctc ttcatttgtc tcaaggtgat gctacatcca
     1921 tgccacagaa tcaaactacc cattacccac cctcagttca gcagacaagt aatcatcaaa
     1981 ggaatggcat ttcaagttcc aagaagcaag tttcatctac tgacactaca gccaacagca
     2041 gcatagatgt agagtgcaca gcaaccaaca tcactagact agaaaaatca aagctagagg
     2101 caaccgatga tagggaaaag gaattactta atgagataac cgatttacat cggaggctgt
     2161 tatacgcaca ggaggagctc cagaaatata aagctggaaa tgcccaggcg tcatgaatca
     2221 tgagttgtat cacacatcaa ccgccaccta aatggatgga acatttttca tccaagatta
     2281 aagacaaagt gaaaaagttc aaatttgttc atgcgcatat acgtaatttt ggttattaat
     2341 ttttttaggc ttgtatcgta gatttttacg tctaatttgg cttttacttt ctaagcaatt
     2401 gagataggtt gaccctgttt gagggtgttt gtattttagt ttgaacgcaa cccaaccgtt
     2461 gttttcctat atgaattgat gcaaatagtc gcatcgcacg ttgtaatttt taaagtaatg
     2521 tt
//
LOCUS       XM_071886449            4111 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine-specific demethylase
            JMJ26-like (LOC139904535), transcript variant X1, mRNA.
ACCESSION   XM_071886449
VERSION     XM_071886449.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4111
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4111
                     /gene="LOC139904535"
                     /note="lysine-specific demethylase JMJ26-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139904535"
     CDS             169..3750
                     /gene="LOC139904535"
                     /codon_start=1
                     /product="lysine-specific demethylase JMJ26-like isoform
                     X1"
                     /protein_id="XP_071742550.1"
                     /db_xref="GeneID:139904535"
                     /translation="MEVLSHTENQDRRNGTREMNVWQKVPTNVLQHGRKRKVPDFTIS
                     QVRDDRESSMKRTKTSIQKEKFGIGFKTYHRRSLKKTCISSDSENIINTQKTCRIDDF
                     YGKSKSSLSKDTFGNDADDASDSDDDYEEDDDSDDDDFNPHSSHGRSKAYKGRQNIGR
                     RGSKGKRNSNKNKGDSNKKETLNRKQVSATNSSEESQEEEEFTGSKESRQPKTKNITK
                     TKKTFVNVADDASDSDDDYKEEDNDDDDDDDDDEEFTPNTSHGRSKASKCKGNKKRNS
                     NKNKGDSNKKETLKRKQVSVTDSSEESQGGEEVTRSKQCKQVDVNGTPHDKKISRRCC
                     AVSNRKSPLENRFVEWEDVISSASEYSDDDDDDDDDEEEEEEEEDDDDDDEEDDNEDE
                     EDEDVGDILTSMEHHDLKYNETEGSSRNSRLEKDVDFTENKNLALVKSNSSRSSSSAD
                     SNLKRTNKDSGDCYSASSGGTTSTVNNMKDQKLVKESLKCHQCKRNDRKTVVPCTNCN
                     ELVYCIQCIKQWYPQLSEEEIADLCPYCRGNCNCNLCLHSTFKTSNIDITPSDKLQHL
                     HYLIESLLPYLKEMRQEQIEEIAVEAHVQGVTESSVIIGQTSCLTDERVYCNHCSTSI
                     IDLHRSCPKCSYELCLGCCREIRKKGLLGPRKVKFGYFHRGFDYMHGEGSLQNSPLEN
                     NPSSPCNSLIEWVAEDDGTLFCAPKEMGGCGTHQPLELKRILQEDWISNLELKAECIL
                     DKFNGQRNYMKDSNTTGGEIYFKAANREDSNDNELYCPAHNDVITGEELNRFRHHWAK
                     GEPIIVRKTLDRTPGLSWEPMVMWRALCEHVDPSVSSKMSQVKAIDCLAGCEVEISTR
                     KFFRGYTEGRQYVNSWPEMLKLKDWPPSDKFDDLLPRHCEEFIIALPFHLYTDPRAGF
                     LNLAVKLPPGVLKPDLGPKTYIAYGMAEELGRGDSVTKLHCDMSDAVNILTHTAEVPV
                     SDNQKLAIRELKKRHRVQDELEMKDEREKNGICTDSIDGCLESEDELNGFSTDKPNDF
                     ALEDEEETGSALWDIFRRQDVPKLQEYLVKHSREFRHAYCCPVDQVYHPIHDQTFYLT
                     MEHKRRLKEEYGIEAWTFEQKLGDAVFIPAGCPHQVRNLKSCTKVAVDFVSPENISEC
                     MRLTEEFRQLPINHKAKEDKLEVKKMIMYAMHQAVTDFEKLSTDQKL"
     misc_feature    1636..>1806
                     /gene="LOC139904535"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; Region: zf-4CXXC_R1; pfam10497"
                     /db_xref="CDD:463117"
     misc_feature    2851..3072
                     /gene="LOC139904535"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; Region: JmjC; smart00558"
                     /db_xref="CDD:214721"
     misc_feature    3268..3579
                     /gene="LOC139904535"
                     /note="RmlC-like cupin superfamily; Region:
                     cupin_RmlC-like; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 ccatcctcac tatgtacgta aactcctctt tctgttgacc taatttcaca atttctataa
       61 tccagattcc ctttcaatta tccgatcaaa ctattgtgtc ctcaatcgat gatctgttta
      121 tcgtgattac gtgctctcaa attcagcgga ttcaacgaat tcgtgaaaat ggaggtatta
      181 agtcatacag aaaatcaaga taggagaaat ggtactagag aaatgaatgt gtggcaaaaa
      241 gttccaacca atgttcttca acatggaaga aagagaaagg ttccagattt cacaatttca
      301 caggtaaggg atgaccgaga gtcgtcaatg aaaaggacaa aaacttctat ccagaaagaa
      361 aaattcggta ttggatttaa aacttatcat cgtaggagtt tgaaaaaaac atgtatttcg
      421 agtgattcag aaaatataat caacacacag aaaacttgta gaatcgatga cttttatggg
      481 aaatcaaaat cttctttaag caaggataca tttgggaatg atgctgatga tgccagtgac
      541 tctgatgatg attatgaaga agatgatgac agcgatgatg atgatttcaa tccacattca
      601 tcacatggaa gatcgaaagc gtataaagga aggcagaaca taggccgaag aggttcaaaa
      661 gggaaacgaa actcgaacaa gaataaaggt gattcaaaca aaaaagaaac gttgaacagg
      721 aagcaagttt cagcaactaa cagttcagaa gaaagccaag aggaagagga attcacgggc
      781 agcaaagaga gcagacaacc aaaaacaaaa aatataacta agacaaagaa aacatttgta
      841 aatgttgctg atgatgccag tgactctgat gatgattata aagaagaaga caatgatgat
      901 gacgatgatg atgacgatga cgaggagttc actccgaata catcacatgg aagatcgaaa
      961 gcctcaaagt gtaaaggaaa caagaaacga aactccaata agaacaaggg cgattcaaac
     1021 aaaaaagaaa cgttgaaaag aaagcaagtt tcagtaactg acagttcaga agaaagccaa
     1081 gggggagagg aagtcacacg cagcaaacag tgcaaacaag ttgatgttaa cggaaccccg
     1141 cacgataaaa aaatatctag aagatgttgt gctgtttcta atagaaagtc acctttggaa
     1201 aaccgttttg tagaatggga agatgtgata tcgtcagcaa gtgagtactc tgatgatgat
     1261 gatgatgatg atgatgatga ggaggaggag gaggaggagg aggatgatga tgacgatgac
     1321 gaggaggacg ataatgagga tgaggaggat gaggatgttg gcgatatttt gacctcaatg
     1381 gagcatcatg acttgaaata taatgagaca gaaggaagtt caagaaacag cagattagaa
     1441 aaagatgttg acttcacaga aaataaaaac ctggctttgg tgaaatctaa ttctagtaga
     1501 agcagtagtt cagctgattc aaatttgaaa agaacaaata aggactcagg agattgctat
     1561 tctgcttcat caggtggcac tacaagtact gtcaacaaca tgaaggacca gaaattagtg
     1621 aaggagagtt tgaaatgtca tcagtgtaag agaaatgata gaaagactgt tgttccctgc
     1681 accaattgta atgaattagt atattgtatc cagtgcatca agcaatggta tcctcaattg
     1741 tcggaagaag aaattgccga tttatgccct tattgtcgtg gaaactgcaa ttgtaacttg
     1801 tgtttacact caacttttaa gacatcaaac atagatatca ctcctagcga taagttgcag
     1861 catcttcact atctaattga gtcgctcctc ccatacctga aagaaatgcg tcaagaacaa
     1921 attgaggaaa ttgcggtgga agcacatgtt caaggggtaa ctgagtcatc agttataata
     1981 gggcagacta gctgtctcac tgatgaacgc gtctattgta accactgttc aacatcgatc
     2041 atagatcttc atcgaagttg tccaaaatgc tcatatgagt tatgtcttgg ttgctgtcgt
     2101 gagatacgta agaaaggtct tcttggtcca agaaaagtca agtttgggta ttttcacaga
     2161 ggttttgatt atatgcacgg ggaaggttct ttacaaaatt ctcctcttga aaataatcca
     2221 agtagcccct gtaattctct aatagaatgg gtagctgaag atgatggaac tttgttttgt
     2281 gctccaaaag aaatgggtgg atgcgggacc catcaacctt tggagctcaa gcgtatcttg
     2341 caagaggact ggatttcaaa tttggaacta aaagctgagt gtatattgga taaatttaac
     2401 ggtcagcgaa actatatgaa agattctaat acaactggtg gcgagatata ttttaaagca
     2461 gccaatagag aagattcaaa tgataatgaa ctatactgtc ctgcgcataa tgatgtcatc
     2521 accggtgagg agctcaatcg cttccgacac cactgggcta aaggcgaacc gataattgtt
     2581 aggaagactc tagatcggac accaggttta agctgggaac ccatggttat gtggcgtgca
     2641 ttatgtgaac atgtggatcc aagtgtcagc tcaaagatgt cacaagtgaa ggctattgat
     2701 tgcttggctg gttgtgaggt tgaaataagt acccgaaagt tttttagagg ctatacagaa
     2761 ggaagacaat atgtaaattc gtggcccgag atgctcaagc tgaaggattg gcctccatcc
     2821 gataagtttg atgatcttct accccgccat tgtgaagaat ttataatcgc attgcctttc
     2881 cacttgtata ctgatccaag ggcaggtttt ttaaatcttg ctgttaagtt accaccaggt
     2941 gtcttgaaac ctgatctggg tcccaaaaca tacattgcat atggaatggc tgaagaactt
     3001 ggaagagggg actctgtaac taagcttcac tgcgatatgt cagatgccgt gaatatattg
     3061 acacacacag ctgaagtacc agtaagtgat aatcagaagt tagcaatcag agagttaaag
     3121 aagcgacaca gagttcagga tgaactagaa atgaaagacg aaagagaaaa aaatggaata
     3181 tgtactgata gtattgatgg atgcttggaa agcgaagatg aactaaacgg attttcaacg
     3241 gataaaccta atgattttgc tttagaagat gaagaggaaa caggtagtgc tctttgggac
     3301 attttccgaa gacaagatgt tccaaagttg caggaatatc tagtgaagca ctccagagaa
     3361 tttcgacatg catattgttg tcctgttgat caggtttatc acccaattca tgatcaaaca
     3421 ttttatttga caatggaaca taaaaggagg ctaaaagagg aatatggcat agaagcctgg
     3481 acgtttgaac aaaagctggg agatgcggtt tttattcctg ctggatgtcc acaccaagtg
     3541 cggaatctta agtcatgtac caaagttgca gtggactttg tttctccaga gaacatatca
     3601 gaatgcatgc gactaacaga agagttccgt caactgccca ttaatcataa agctaaagaa
     3661 gacaaactag aggtaaagaa gatgatcatg tatgctatgc atcaagccgt taccgacttt
     3721 gaaaagttgt caactgacca gaaattatag attaaataaa aggtatttat agtgacgtgg
     3781 tagtatgcaa cccaacccat ctgcttccag acccacctga actaattcag tagtgtggtg
     3841 tcgttttgag tagtagaaat acagtaaatc tttctatatc ttcttttgtt ttttggactt
     3901 ggtgtttgtg gtgtcgttag ctatgtcgaa acaagcataa agcttgtatt ataggttttg
     3961 gataatacaa ctaataaatg gttgtttggg gttttggtat tatgttatgc tggtaatata
     4021 acttattaaa ggggtattat gttatatttt tattaagctt atatatgttt tttttttttt
     4081 tgtttagttg attgcttttt aggcgtgagc c
//
LOCUS       XM_071886450            5971 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine-specific demethylase
            JMJ26-like (LOC139904535), transcript variant X2, mRNA.
ACCESSION   XM_071886450
VERSION     XM_071886450.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5971
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5971
                     /gene="LOC139904535"
                     /note="lysine-specific demethylase JMJ26-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904535"
     CDS             169..3702
                     /gene="LOC139904535"
                     /codon_start=1
                     /product="lysine-specific demethylase JMJ29-like isoform
                     X2"
                     /protein_id="XP_071742551.1"
                     /db_xref="GeneID:139904535"
                     /translation="MEVLSHTENQDRRNGTREMNVWQKVPTNVLQHGRKRKVPDFTIS
                     QVRDDRESSMKRTKTSIQKEKFGIGFKTYHRRSLKKTCISSDSENIINTQKTCRIDDF
                     YGKSKSSLSKDTFGNDADDASDSDDDYEEDDDSDDDDFNPHSSHGRSKAYKGRQNIGR
                     RGSKGKRNSNKNKGDSNKKETLNRKQVSATNSSEESQEEEEFTGSKESRQPKTKNITK
                     TKKTFVNVADDASDSDDDYKEEDNDDDDDDDDDEEFTPNTSHGRSKASKCKGNKKRNS
                     NKNKGDSNKKETLKRKQVSVTDSSEESQGGEEVTRSKQCKQVDVNGTPHDKKISRRCC
                     AVSNRKSPLENRFVEWEDVISSASEYSDDDDDDDDDEEEEEEEEDDDDDDEEDDNEDE
                     EDEDVGDILTSMEHHDLKYNETEGSSRNSRLEKDVDFTENKNLALVKSNSSRSSSSAD
                     SNLKRTNKDSGDCYSASSGGTTSTVNNMKDQKLVKESLKCHQCKRNDRKTVVPCTNCN
                     ELVYCIQCIKQWYPQLSEEEIADLCPYCRGNCNCNLCLHSTFKTSNIDITPSDKLQHL
                     HYLIESLLPYLKEMRQEQIEEIAVEAHVQGVTESSVIIGQTSCLTDERVYCNHCSTSI
                     IDLHRSCPKCSYELCLGCCREIRKKGLLGPRKVKFGYFHRGFDYMHGEGSLQNSPLEN
                     NPSSPCNSLIEWVAEDDGTLFCAPKEMGGCGTHQPLELKRILQEDWISNLELKAECIL
                     DKFNGQRNYMKDSNTTGGEIYFKAANREDSNDNELYCPAHNDVITGEELNRFRHHWAK
                     GEPIIVRKTLDRTPGLSWEPMVMWRALCEHVDPSVSSKMSQVKAIDCLAGCEVEISTR
                     KFFRGYTEGRQYVNSWPEMLKLKDWPPSDKFDDLLPRHCEEFIIALPFHLYTDPRAGF
                     LNLAVKLPPGVLKPDLGPKTYIAYGMAEELGRGDSVTKLHCDMSDAVNILTHTAEVPV
                     SDNQKLAIRELKKRHRVQDELEMKDEREKNGICTDSIDGCLESEDELNGFSTDKPNDF
                     ALEDEEETGSALWDIFRRQDVPKLQEYLVKHSREFRHAYCCPVDQVYHPIHDQTFYLT
                     MEHKRRLKEEYGIEAWTFEQKLGDAVFIPAGCPHQVRNLKLEGIKMEVRCSRILCTYI
                     ICMCIYAKGKRPWLGGEATAKYSVFVLLFFF"
     misc_feature    1636..>1806
                     /gene="LOC139904535"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; Region: zf-4CXXC_R1; pfam10497"
                     /db_xref="CDD:463117"
     misc_feature    2851..3072
                     /gene="LOC139904535"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; Region: JmjC; smart00558"
                     /db_xref="CDD:214721"
     misc_feature    3268..3549
                     /gene="LOC139904535"
                     /note="RmlC-like cupin superfamily; Region:
                     cupin_RmlC-like; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 ccatcctcac tatgtacgta aactcctctt tctgttgacc taatttcaca atttctataa
       61 tccagattcc ctttcaatta tccgatcaaa ctattgtgtc ctcaatcgat gatctgttta
      121 tcgtgattac gtgctctcaa attcagcgga ttcaacgaat tcgtgaaaat ggaggtatta
      181 agtcatacag aaaatcaaga taggagaaat ggtactagag aaatgaatgt gtggcaaaaa
      241 gttccaacca atgttcttca acatggaaga aagagaaagg ttccagattt cacaatttca
      301 caggtaaggg atgaccgaga gtcgtcaatg aaaaggacaa aaacttctat ccagaaagaa
      361 aaattcggta ttggatttaa aacttatcat cgtaggagtt tgaaaaaaac atgtatttcg
      421 agtgattcag aaaatataat caacacacag aaaacttgta gaatcgatga cttttatggg
      481 aaatcaaaat cttctttaag caaggataca tttgggaatg atgctgatga tgccagtgac
      541 tctgatgatg attatgaaga agatgatgac agcgatgatg atgatttcaa tccacattca
      601 tcacatggaa gatcgaaagc gtataaagga aggcagaaca taggccgaag aggttcaaaa
      661 gggaaacgaa actcgaacaa gaataaaggt gattcaaaca aaaaagaaac gttgaacagg
      721 aagcaagttt cagcaactaa cagttcagaa gaaagccaag aggaagagga attcacgggc
      781 agcaaagaga gcagacaacc aaaaacaaaa aatataacta agacaaagaa aacatttgta
      841 aatgttgctg atgatgccag tgactctgat gatgattata aagaagaaga caatgatgat
      901 gacgatgatg atgacgatga cgaggagttc actccgaata catcacatgg aagatcgaaa
      961 gcctcaaagt gtaaaggaaa caagaaacga aactccaata agaacaaggg cgattcaaac
     1021 aaaaaagaaa cgttgaaaag aaagcaagtt tcagtaactg acagttcaga agaaagccaa
     1081 gggggagagg aagtcacacg cagcaaacag tgcaaacaag ttgatgttaa cggaaccccg
     1141 cacgataaaa aaatatctag aagatgttgt gctgtttcta atagaaagtc acctttggaa
     1201 aaccgttttg tagaatggga agatgtgata tcgtcagcaa gtgagtactc tgatgatgat
     1261 gatgatgatg atgatgatga ggaggaggag gaggaggagg aggatgatga tgacgatgac
     1321 gaggaggacg ataatgagga tgaggaggat gaggatgttg gcgatatttt gacctcaatg
     1381 gagcatcatg acttgaaata taatgagaca gaaggaagtt caagaaacag cagattagaa
     1441 aaagatgttg acttcacaga aaataaaaac ctggctttgg tgaaatctaa ttctagtaga
     1501 agcagtagtt cagctgattc aaatttgaaa agaacaaata aggactcagg agattgctat
     1561 tctgcttcat caggtggcac tacaagtact gtcaacaaca tgaaggacca gaaattagtg
     1621 aaggagagtt tgaaatgtca tcagtgtaag agaaatgata gaaagactgt tgttccctgc
     1681 accaattgta atgaattagt atattgtatc cagtgcatca agcaatggta tcctcaattg
     1741 tcggaagaag aaattgccga tttatgccct tattgtcgtg gaaactgcaa ttgtaacttg
     1801 tgtttacact caacttttaa gacatcaaac atagatatca ctcctagcga taagttgcag
     1861 catcttcact atctaattga gtcgctcctc ccatacctga aagaaatgcg tcaagaacaa
     1921 attgaggaaa ttgcggtgga agcacatgtt caaggggtaa ctgagtcatc agttataata
     1981 gggcagacta gctgtctcac tgatgaacgc gtctattgta accactgttc aacatcgatc
     2041 atagatcttc atcgaagttg tccaaaatgc tcatatgagt tatgtcttgg ttgctgtcgt
     2101 gagatacgta agaaaggtct tcttggtcca agaaaagtca agtttgggta ttttcacaga
     2161 ggttttgatt atatgcacgg ggaaggttct ttacaaaatt ctcctcttga aaataatcca
     2221 agtagcccct gtaattctct aatagaatgg gtagctgaag atgatggaac tttgttttgt
     2281 gctccaaaag aaatgggtgg atgcgggacc catcaacctt tggagctcaa gcgtatcttg
     2341 caagaggact ggatttcaaa tttggaacta aaagctgagt gtatattgga taaatttaac
     2401 ggtcagcgaa actatatgaa agattctaat acaactggtg gcgagatata ttttaaagca
     2461 gccaatagag aagattcaaa tgataatgaa ctatactgtc ctgcgcataa tgatgtcatc
     2521 accggtgagg agctcaatcg cttccgacac cactgggcta aaggcgaacc gataattgtt
     2581 aggaagactc tagatcggac accaggttta agctgggaac ccatggttat gtggcgtgca
     2641 ttatgtgaac atgtggatcc aagtgtcagc tcaaagatgt cacaagtgaa ggctattgat
     2701 tgcttggctg gttgtgaggt tgaaataagt acccgaaagt tttttagagg ctatacagaa
     2761 ggaagacaat atgtaaattc gtggcccgag atgctcaagc tgaaggattg gcctccatcc
     2821 gataagtttg atgatcttct accccgccat tgtgaagaat ttataatcgc attgcctttc
     2881 cacttgtata ctgatccaag ggcaggtttt ttaaatcttg ctgttaagtt accaccaggt
     2941 gtcttgaaac ctgatctggg tcccaaaaca tacattgcat atggaatggc tgaagaactt
     3001 ggaagagggg actctgtaac taagcttcac tgcgatatgt cagatgccgt gaatatattg
     3061 acacacacag ctgaagtacc agtaagtgat aatcagaagt tagcaatcag agagttaaag
     3121 aagcgacaca gagttcagga tgaactagaa atgaaagacg aaagagaaaa aaatggaata
     3181 tgtactgata gtattgatgg atgcttggaa agcgaagatg aactaaacgg attttcaacg
     3241 gataaaccta atgattttgc tttagaagat gaagaggaaa caggtagtgc tctttgggac
     3301 attttccgaa gacaagatgt tccaaagttg caggaatatc tagtgaagca ctccagagaa
     3361 tttcgacatg catattgttg tcctgttgat caggtttatc acccaattca tgatcaaaca
     3421 ttttatttga caatggaaca taaaaggagg ctaaaagagg aatatggcat agaagcctgg
     3481 acgtttgaac aaaagctggg agatgcggtt tttattcctg ctggatgtcc acaccaagtg
     3541 cggaatctta agcttgaagg tataaagatg gaggtacgtt gttctcgtat tctgtgtacg
     3601 tatatcatat gtatgtgtat atatgcaaag ggaaagaggc cgtggttagg tggggaggca
     3661 acagccaagt actccgtatt tgttttgctt tttttttttt aattaattaa taataacaaa
     3721 aacaacaaca ataaatataa ataagatggt ttttttatgg cgaaaaaatg aattgtatta
     3781 aaagcgatat cttcatcaaa acgatgaatg agtcaagaaa agatacaatg acggagataa
     3841 actctcggtc atgaagtcca aattacaaac aacatcacaa attactctaa taacataaaa
     3901 gaagaggatg atattcccaa acataagagt gtaatccatg aaaaaaaaaa ttgagattgg
     3961 tagcacaaag aaacaccatg agtttaatat tcctaacgag gaccgaacgg caagtgaatt
     4021 taccattaaa aatgaagtcg ttcctagcca tccatattgc ccaaatagtt gcggggccta
     4081 ttaacttcta aaattttgga accttaattc ccatgccatg aaaccaatca aaggaaaaag
     4141 cttcaatcga tcgagagatc acccatctaa tgttccacca cttgtacaaa tctgcccaaa
     4201 taagatgaga ccatttacaa tgtataaaaa agatagttgt tacgtcaatt ttctatggag
     4261 taatttataa taataacatt aataatgata tatattataa ataatagtaa taaaagtaat
     4321 aatgatataa atataaataa atataaataa tactagtaat aagtttaatt attttaataa
     4381 ttaaaatata atgggtctca gtgtgataag gaggaaaggt gtcatggatg atatgtattc
     4441 tcgagtttat ttttgcaaaa aaaagaaagg gtagggaagg ataaaacact aatcaagcat
     4501 ttctgagttg ttttcatgat agaaagaaga ggagaggaga gggttagaga ggaaatttca
     4561 ccggttttta attactatct caattttgag gtgatttagg aaatctcata ggcctttcag
     4621 cctgattact atctcaattt tgaggtgact tgaatgaatt atctttttac ttacggcctc
     4681 tctcattttc acgaataaaa aaattgtagc agctatcgta tatgaaccat tatataattc
     4741 cacttaagac catagataac acgggcattt gtcccacacc cacttttaca tggcaatgcc
     4801 cgggcgtttg tgataaaaaa aaaaaaaaat tgggtgtttg tcaaagagaa acagcagtgt
     4861 ttttgatttt ttttatattt ttttttaatc ttttcctaga attttcacca ctttttaact
     4921 caatcttcaa ttatatttta ccacttcacc cacaaacgtc caacgacctt ctccattata
     4981 acccccatac ttaacacatc acatgcataa ctcaaaaaaa tcccgtcatc cactccacat
     5041 taacgtcacc attatcattg gaagggatta tcatacatgt atcattatac atgtaccatt
     5101 atcgtacaac tatcgtacat gtaccatttt cactcatcac aactatcttt tctactaggg
     5161 attatcttaa gttttcacta ataaattgta ccggcctccc tcattatatc actacaacaa
     5221 caacaaaact caatctcaca aaagtgaggt atgaggaggt aagatgtaga caatctttct
     5281 ctcatcataa aatatagaga agtcatttct gtacacagag tgaaacaccc taagagtaga
     5341 gaaagagact gtttactttt tttcccatta agtatatgta tggcagaatg gatatgtatg
     5401 gcagtatggg ttaaagttgt taataatttg ttgttgttta ctttttgtgc tgaataaaat
     5461 atctgaatga tagaaaatta ccattttaac ctcgtaatac aaagtgtaca taatattaat
     5521 tactcctatt aaatttatga acttttaaca aaatatattg tgattaaata attccgaaaa
     5581 taatgaccaa aaacatacca attgaatcct agcttatata tccagttagt aaaaagtgaa
     5641 gaaaataaat attcttcaca ccaagaagat acggagtact ataattacat acgccgccag
     5701 cgaatccctt tttctttttt cttacaacca acaacagatc catgagcaaa catgaacttg
     5761 ttctcttttt catttgaaca aaatggaccc aaaatcgaac aaaaaaaagt agggtcggtc
     5821 ggagaagaaa ttcacagaat aaacacagac ctgttattaa tgattaatta ttattctaac
     5881 tattgagtag atgttgattc tcaatttggg gattaaagag taatggagga atatgataaa
     5941 tgatgaaaga gatgataggt actttggtaa a
//
LOCUS       XM_071886451            4008 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine-specific demethylase
            JMJ26-like (LOC139904535), transcript variant X3, mRNA.
ACCESSION   XM_071886451
VERSION     XM_071886451.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4008
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4008
                     /gene="LOC139904535"
                     /note="lysine-specific demethylase JMJ26-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904535"
     CDS             169..3651
                     /gene="LOC139904535"
                     /codon_start=1
                     /product="lysine-specific demethylase JMJ29-like isoform
                     X3"
                     /protein_id="XP_071742552.1"
                     /db_xref="GeneID:139904535"
                     /translation="MEVLSHTENQDRRNGTREMNVWQKVPTNVLQHGRKRKVPDFTIS
                     QVRDDRESSMKRTKTSIQKEKFGIGFKTYHRRSLKKTCISSDSENIINTQKTCRIDDF
                     YGKSKSSLSKDTFGNDADDASDSDDDYEEDDDSDDDDFNPHSSHGRSKAYKGRQNIGR
                     RGSKGKRNSNKNKGDSNKKETLNRKQVSATNSSEESQEEEEFTGSKESRQPKTKNITK
                     TKKTFVNVADDASDSDDDYKEEDNDDDDDDDDDEEFTPNTSHGRSKASKCKGNKKRNS
                     NKNKGDSNKKETLKRKQVSVTDSSEESQGGEEVTRSKQCKQVDVNGTPHDKKISRRCC
                     AVSNRKSPLENRFVEWEDVISSASEYSDDDDDDDDDEEEEEEEEDDDDDDEEDDNEDE
                     EDEDVGDILTSMEHHDLKYNETEGSSRNSRLEKDVDFTENKNLALVKSNSSRSSSSAD
                     SNLKRTNKDSGDCYSASSGGTTSTVNNMKDQKLVKESLKCHQCKRNDRKTVVPCTNCN
                     ELVYCIQCIKQWYPQLSEEEIADLCPYCRGNCNCNLCLHSTFKTSNIDITPSDKLQHL
                     HYLIESLLPYLKEMRQEQIEEIAVEAHVQGVTESSVIIGQTSCLTDERVYCNHCSTSI
                     IDLHRSCPKCSYELCLGCCREIRKKGLLGPRKVKFGYFHRGFDYMHGEGSLQNSPLEN
                     NPSSPCNSLIEWVAEDDGTLFCAPKEMGGCGTHQPLELKRILQEDWISNLELKAECIL
                     DKFNGQRNYMKDSNTTGGEIYFKAANREDSNDNELYCPAHNDVITGEELNRFRHHWAK
                     GEPIIVRKTLDRTPGLSWEPMVMWRALCEHVDPSVSSKMSQVKAIDCLAGCEVEISTR
                     KFFRGYTEGRQYVNSWPEMLKLKDWPPSDKFDDLLPRHCEEFIIALPFHLYTDPRAGF
                     LNLAVKLPPGVLKPDLGPKTYIAYGMAEELGRGDSVTKLHCDMSDAVNILTHTAEVPV
                     SDNQKLAIRELKKRHRVQDELEMKDEREKNGICTDSIDGCLESEDELNGFSTDKPNDF
                     ALEDEEETGSALWDIFRRQDVPKLQEYLVKHSREFRHAYCCPVDQVYHPIHDQTFYLT
                     MEHKRRLKEEYGIEAWTFEQKLGDAVFIPAGCPHQVRNLKSYGCSSDVDGATSTFATC
                     RTKKNVASDHNTRS"
     misc_feature    1636..>1806
                     /gene="LOC139904535"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; Region: zf-4CXXC_R1; pfam10497"
                     /db_xref="CDD:463117"
     misc_feature    2851..3072
                     /gene="LOC139904535"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; Region: JmjC; smart00558"
                     /db_xref="CDD:214721"
     misc_feature    3268..3555
                     /gene="LOC139904535"
                     /note="RmlC-like cupin superfamily; Region:
                     cupin_RmlC-like; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 ccatcctcac tatgtacgta aactcctctt tctgttgacc taatttcaca atttctataa
       61 tccagattcc ctttcaatta tccgatcaaa ctattgtgtc ctcaatcgat gatctgttta
      121 tcgtgattac gtgctctcaa attcagcgga ttcaacgaat tcgtgaaaat ggaggtatta
      181 agtcatacag aaaatcaaga taggagaaat ggtactagag aaatgaatgt gtggcaaaaa
      241 gttccaacca atgttcttca acatggaaga aagagaaagg ttccagattt cacaatttca
      301 caggtaaggg atgaccgaga gtcgtcaatg aaaaggacaa aaacttctat ccagaaagaa
      361 aaattcggta ttggatttaa aacttatcat cgtaggagtt tgaaaaaaac atgtatttcg
      421 agtgattcag aaaatataat caacacacag aaaacttgta gaatcgatga cttttatggg
      481 aaatcaaaat cttctttaag caaggataca tttgggaatg atgctgatga tgccagtgac
      541 tctgatgatg attatgaaga agatgatgac agcgatgatg atgatttcaa tccacattca
      601 tcacatggaa gatcgaaagc gtataaagga aggcagaaca taggccgaag aggttcaaaa
      661 gggaaacgaa actcgaacaa gaataaaggt gattcaaaca aaaaagaaac gttgaacagg
      721 aagcaagttt cagcaactaa cagttcagaa gaaagccaag aggaagagga attcacgggc
      781 agcaaagaga gcagacaacc aaaaacaaaa aatataacta agacaaagaa aacatttgta
      841 aatgttgctg atgatgccag tgactctgat gatgattata aagaagaaga caatgatgat
      901 gacgatgatg atgacgatga cgaggagttc actccgaata catcacatgg aagatcgaaa
      961 gcctcaaagt gtaaaggaaa caagaaacga aactccaata agaacaaggg cgattcaaac
     1021 aaaaaagaaa cgttgaaaag aaagcaagtt tcagtaactg acagttcaga agaaagccaa
     1081 gggggagagg aagtcacacg cagcaaacag tgcaaacaag ttgatgttaa cggaaccccg
     1141 cacgataaaa aaatatctag aagatgttgt gctgtttcta atagaaagtc acctttggaa
     1201 aaccgttttg tagaatggga agatgtgata tcgtcagcaa gtgagtactc tgatgatgat
     1261 gatgatgatg atgatgatga ggaggaggag gaggaggagg aggatgatga tgacgatgac
     1321 gaggaggacg ataatgagga tgaggaggat gaggatgttg gcgatatttt gacctcaatg
     1381 gagcatcatg acttgaaata taatgagaca gaaggaagtt caagaaacag cagattagaa
     1441 aaagatgttg acttcacaga aaataaaaac ctggctttgg tgaaatctaa ttctagtaga
     1501 agcagtagtt cagctgattc aaatttgaaa agaacaaata aggactcagg agattgctat
     1561 tctgcttcat caggtggcac tacaagtact gtcaacaaca tgaaggacca gaaattagtg
     1621 aaggagagtt tgaaatgtca tcagtgtaag agaaatgata gaaagactgt tgttccctgc
     1681 accaattgta atgaattagt atattgtatc cagtgcatca agcaatggta tcctcaattg
     1741 tcggaagaag aaattgccga tttatgccct tattgtcgtg gaaactgcaa ttgtaacttg
     1801 tgtttacact caacttttaa gacatcaaac atagatatca ctcctagcga taagttgcag
     1861 catcttcact atctaattga gtcgctcctc ccatacctga aagaaatgcg tcaagaacaa
     1921 attgaggaaa ttgcggtgga agcacatgtt caaggggtaa ctgagtcatc agttataata
     1981 gggcagacta gctgtctcac tgatgaacgc gtctattgta accactgttc aacatcgatc
     2041 atagatcttc atcgaagttg tccaaaatgc tcatatgagt tatgtcttgg ttgctgtcgt
     2101 gagatacgta agaaaggtct tcttggtcca agaaaagtca agtttgggta ttttcacaga
     2161 ggttttgatt atatgcacgg ggaaggttct ttacaaaatt ctcctcttga aaataatcca
     2221 agtagcccct gtaattctct aatagaatgg gtagctgaag atgatggaac tttgttttgt
     2281 gctccaaaag aaatgggtgg atgcgggacc catcaacctt tggagctcaa gcgtatcttg
     2341 caagaggact ggatttcaaa tttggaacta aaagctgagt gtatattgga taaatttaac
     2401 ggtcagcgaa actatatgaa agattctaat acaactggtg gcgagatata ttttaaagca
     2461 gccaatagag aagattcaaa tgataatgaa ctatactgtc ctgcgcataa tgatgtcatc
     2521 accggtgagg agctcaatcg cttccgacac cactgggcta aaggcgaacc gataattgtt
     2581 aggaagactc tagatcggac accaggttta agctgggaac ccatggttat gtggcgtgca
     2641 ttatgtgaac atgtggatcc aagtgtcagc tcaaagatgt cacaagtgaa ggctattgat
     2701 tgcttggctg gttgtgaggt tgaaataagt acccgaaagt tttttagagg ctatacagaa
     2761 ggaagacaat atgtaaattc gtggcccgag atgctcaagc tgaaggattg gcctccatcc
     2821 gataagtttg atgatcttct accccgccat tgtgaagaat ttataatcgc attgcctttc
     2881 cacttgtata ctgatccaag ggcaggtttt ttaaatcttg ctgttaagtt accaccaggt
     2941 gtcttgaaac ctgatctggg tcccaaaaca tacattgcat atggaatggc tgaagaactt
     3001 ggaagagggg actctgtaac taagcttcac tgcgatatgt cagatgccgt gaatatattg
     3061 acacacacag ctgaagtacc agtaagtgat aatcagaagt tagcaatcag agagttaaag
     3121 aagcgacaca gagttcagga tgaactagaa atgaaagacg aaagagaaaa aaatggaata
     3181 tgtactgata gtattgatgg atgcttggaa agcgaagatg aactaaacgg attttcaacg
     3241 gataaaccta atgattttgc tttagaagat gaagaggaaa caggtagtgc tctttgggac
     3301 attttccgaa gacaagatgt tccaaagttg caggaatatc tagtgaagca ctccagagaa
     3361 tttcgacatg catattgttg tcctgttgat caggtttatc acccaattca tgatcaaaca
     3421 ttttatttga caatggaaca taaaaggagg ctaaaagagg aatatggcat agaagcctgg
     3481 acgtttgaac aaaagctggg agatgcggtt tttattcctg ctggatgtcc acaccaagtg
     3541 cggaatctta agagctacgg ttgtagttcg gatgtggatg gcgcaacatc gacatttgca
     3601 acatgtcgaa cgaagaaaaa tgtagcaagt gatcacaata cacgatcatg atcaaaaaac
     3661 aaatagcttg tagcatggtt gatcataatc tgtgatcaac atcaagtctg agcatgaaaa
     3721 tcaagattac gagggtcaat gttgggtaat cttgtcttgc atcggaagtt aaaagaagct
     3781 aatgtatgca taataagcac tttggaacct ctcaagatta tgaggaagaa tgtttgttaa
     3841 tcttgtccta catcggaagt tgaaagaagc taatatatgc atataagcgc tttggaacct
     3901 tcatctaaag aactcaatgc atttatatgt tgtaaatctt tttgaactaa aacgatccta
     3961 cattattgtc aatcatttat attttattaa ttttcagtca aaattact
//
LOCUS       XM_071886452            4952 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine-specific demethylase
            JMJ26-like (LOC139904535), transcript variant X4, mRNA.
ACCESSION   XM_071886452
VERSION     XM_071886452.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4952
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4952
                     /gene="LOC139904535"
                     /note="lysine-specific demethylase JMJ26-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904535"
     CDS             169..3639
                     /gene="LOC139904535"
                     /codon_start=1
                     /product="lysine-specific demethylase JMJ29-like isoform
                     X4"
                     /protein_id="XP_071742553.1"
                     /db_xref="GeneID:139904535"
                     /translation="MEVLSHTENQDRRNGTREMNVWQKVPTNVLQHGRKRKVPDFTIS
                     QVRDDRESSMKRTKTSIQKEKFGIGFKTYHRRSLKKTCISSDSENIINTQKTCRIDDF
                     YGKSKSSLSKDTFGNDADDASDSDDDYEEDDDSDDDDFNPHSSHGRSKAYKGRQNIGR
                     RGSKGKRNSNKNKGDSNKKETLNRKQVSATNSSEESQEEEEFTGSKESRQPKTKNITK
                     TKKTFVNVADDASDSDDDYKEEDNDDDDDDDDDEEFTPNTSHGRSKASKCKGNKKRNS
                     NKNKGDSNKKETLKRKQVSVTDSSEESQGGEEVTRSKQCKQVDVNGTPHDKKISRRCC
                     AVSNRKSPLENRFVEWEDVISSASEYSDDDDDDDDDEEEEEEEEDDDDDDEEDDNEDE
                     EDEDVGDILTSMEHHDLKYNETEGSSRNSRLEKDVDFTENKNLALVKSNSSRSSSSAD
                     SNLKRTNKDSGDCYSASSGGTTSTVNNMKDQKLVKESLKCHQCKRNDRKTVVPCTNCN
                     ELVYCIQCIKQWYPQLSEEEIADLCPYCRGNCNCNLCLHSTFKTSNIDITPSDKLQHL
                     HYLIESLLPYLKEMRQEQIEEIAVEAHVQGVTESSVIIGQTSCLTDERVYCNHCSTSI
                     IDLHRSCPKCSYELCLGCCREIRKKGLLGPRKVKFGYFHRGFDYMHGEGSLQNSPLEN
                     NPSSPCNSLIEWVAEDDGTLFCAPKEMGGCGTHQPLELKRILQEDWISNLELKAECIL
                     DKFNGQRNYMKDSNTTGGEIYFKAANREDSNDNELYCPAHNDVITGEELNRFRHHWAK
                     GEPIIVRKTLDRTPGLSWEPMVMWRALCEHVDPSVSSKMSQVKAIDCLAGCEVEISTR
                     KFFRGYTEGRQYVNSWPEMLKLKDWPPSDKFDDLLPRHCEEFIIALPFHLYTDPRAGF
                     LNLAVKLPPGVLKPDLGPKTYIAYGMAEELGRGDSVTKLHCDMSDAVNILTHTAEVPV
                     SDNQKLAIRELKKRHRVQDELEMKDEREKNGICTDSIDGCLESEDELNGFSTDKPNDF
                     ALEDEEETGSALWDIFRRQDVPKLQEYLVKHSREFRHAYCCPVDQVYHPIHDQTFYLT
                     MEHKRRLKEEYGIEAWTFEQKLGDAVFIPAGCPHQVRNLKHKISTHSNMEIHMRDNII
                     PRMKLWTCRN"
     misc_feature    1636..>1806
                     /gene="LOC139904535"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; Region: zf-4CXXC_R1; pfam10497"
                     /db_xref="CDD:463117"
     misc_feature    2851..3072
                     /gene="LOC139904535"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; Region: JmjC; smart00558"
                     /db_xref="CDD:214721"
     misc_feature    3268..3576
                     /gene="LOC139904535"
                     /note="RmlC-like cupin superfamily; Region:
                     cupin_RmlC-like; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 ccatcctcac tatgtacgta aactcctctt tctgttgacc taatttcaca atttctataa
       61 tccagattcc ctttcaatta tccgatcaaa ctattgtgtc ctcaatcgat gatctgttta
      121 tcgtgattac gtgctctcaa attcagcgga ttcaacgaat tcgtgaaaat ggaggtatta
      181 agtcatacag aaaatcaaga taggagaaat ggtactagag aaatgaatgt gtggcaaaaa
      241 gttccaacca atgttcttca acatggaaga aagagaaagg ttccagattt cacaatttca
      301 caggtaaggg atgaccgaga gtcgtcaatg aaaaggacaa aaacttctat ccagaaagaa
      361 aaattcggta ttggatttaa aacttatcat cgtaggagtt tgaaaaaaac atgtatttcg
      421 agtgattcag aaaatataat caacacacag aaaacttgta gaatcgatga cttttatggg
      481 aaatcaaaat cttctttaag caaggataca tttgggaatg atgctgatga tgccagtgac
      541 tctgatgatg attatgaaga agatgatgac agcgatgatg atgatttcaa tccacattca
      601 tcacatggaa gatcgaaagc gtataaagga aggcagaaca taggccgaag aggttcaaaa
      661 gggaaacgaa actcgaacaa gaataaaggt gattcaaaca aaaaagaaac gttgaacagg
      721 aagcaagttt cagcaactaa cagttcagaa gaaagccaag aggaagagga attcacgggc
      781 agcaaagaga gcagacaacc aaaaacaaaa aatataacta agacaaagaa aacatttgta
      841 aatgttgctg atgatgccag tgactctgat gatgattata aagaagaaga caatgatgat
      901 gacgatgatg atgacgatga cgaggagttc actccgaata catcacatgg aagatcgaaa
      961 gcctcaaagt gtaaaggaaa caagaaacga aactccaata agaacaaggg cgattcaaac
     1021 aaaaaagaaa cgttgaaaag aaagcaagtt tcagtaactg acagttcaga agaaagccaa
     1081 gggggagagg aagtcacacg cagcaaacag tgcaaacaag ttgatgttaa cggaaccccg
     1141 cacgataaaa aaatatctag aagatgttgt gctgtttcta atagaaagtc acctttggaa
     1201 aaccgttttg tagaatggga agatgtgata tcgtcagcaa gtgagtactc tgatgatgat
     1261 gatgatgatg atgatgatga ggaggaggag gaggaggagg aggatgatga tgacgatgac
     1321 gaggaggacg ataatgagga tgaggaggat gaggatgttg gcgatatttt gacctcaatg
     1381 gagcatcatg acttgaaata taatgagaca gaaggaagtt caagaaacag cagattagaa
     1441 aaagatgttg acttcacaga aaataaaaac ctggctttgg tgaaatctaa ttctagtaga
     1501 agcagtagtt cagctgattc aaatttgaaa agaacaaata aggactcagg agattgctat
     1561 tctgcttcat caggtggcac tacaagtact gtcaacaaca tgaaggacca gaaattagtg
     1621 aaggagagtt tgaaatgtca tcagtgtaag agaaatgata gaaagactgt tgttccctgc
     1681 accaattgta atgaattagt atattgtatc cagtgcatca agcaatggta tcctcaattg
     1741 tcggaagaag aaattgccga tttatgccct tattgtcgtg gaaactgcaa ttgtaacttg
     1801 tgtttacact caacttttaa gacatcaaac atagatatca ctcctagcga taagttgcag
     1861 catcttcact atctaattga gtcgctcctc ccatacctga aagaaatgcg tcaagaacaa
     1921 attgaggaaa ttgcggtgga agcacatgtt caaggggtaa ctgagtcatc agttataata
     1981 gggcagacta gctgtctcac tgatgaacgc gtctattgta accactgttc aacatcgatc
     2041 atagatcttc atcgaagttg tccaaaatgc tcatatgagt tatgtcttgg ttgctgtcgt
     2101 gagatacgta agaaaggtct tcttggtcca agaaaagtca agtttgggta ttttcacaga
     2161 ggttttgatt atatgcacgg ggaaggttct ttacaaaatt ctcctcttga aaataatcca
     2221 agtagcccct gtaattctct aatagaatgg gtagctgaag atgatggaac tttgttttgt
     2281 gctccaaaag aaatgggtgg atgcgggacc catcaacctt tggagctcaa gcgtatcttg
     2341 caagaggact ggatttcaaa tttggaacta aaagctgagt gtatattgga taaatttaac
     2401 ggtcagcgaa actatatgaa agattctaat acaactggtg gcgagatata ttttaaagca
     2461 gccaatagag aagattcaaa tgataatgaa ctatactgtc ctgcgcataa tgatgtcatc
     2521 accggtgagg agctcaatcg cttccgacac cactgggcta aaggcgaacc gataattgtt
     2581 aggaagactc tagatcggac accaggttta agctgggaac ccatggttat gtggcgtgca
     2641 ttatgtgaac atgtggatcc aagtgtcagc tcaaagatgt cacaagtgaa ggctattgat
     2701 tgcttggctg gttgtgaggt tgaaataagt acccgaaagt tttttagagg ctatacagaa
     2761 ggaagacaat atgtaaattc gtggcccgag atgctcaagc tgaaggattg gcctccatcc
     2821 gataagtttg atgatcttct accccgccat tgtgaagaat ttataatcgc attgcctttc
     2881 cacttgtata ctgatccaag ggcaggtttt ttaaatcttg ctgttaagtt accaccaggt
     2941 gtcttgaaac ctgatctggg tcccaaaaca tacattgcat atggaatggc tgaagaactt
     3001 ggaagagggg actctgtaac taagcttcac tgcgatatgt cagatgccgt gaatatattg
     3061 acacacacag ctgaagtacc agtaagtgat aatcagaagt tagcaatcag agagttaaag
     3121 aagcgacaca gagttcagga tgaactagaa atgaaagacg aaagagaaaa aaatggaata
     3181 tgtactgata gtattgatgg atgcttggaa agcgaagatg aactaaacgg attttcaacg
     3241 gataaaccta atgattttgc tttagaagat gaagaggaaa caggtagtgc tctttgggac
     3301 attttccgaa gacaagatgt tccaaagttg caggaatatc tagtgaagca ctccagagaa
     3361 tttcgacatg catattgttg tcctgttgat caggtttatc acccaattca tgatcaaaca
     3421 ttttatttga caatggaaca taaaaggagg ctaaaagagg aatatggcat agaagcctgg
     3481 acgtttgaac aaaagctggg agatgcggtt tttattcctg ctggatgtcc acaccaagtg
     3541 cggaatctta agcataagat atctactcac tccaacatgg aaattcatat gagggataat
     3601 attataccgc gcatgaaatt atggacatgt cgaaactaga atgatgatgc taagaatatg
     3661 tagattctag gatcctaccc tattcttgaa tgcaaggttg caagaatcgt taatcggaga
     3721 ccaaccggtc cggaccttgt aaggataaat cagacaactt tggaataacc aactttgact
     3781 tcgatcaatt ttaaccgact aaatttgact tttcaccgat tttggtccgt tgactagtgt
     3841 tgaccaatgt tgatcgattt tgacaagttt aatcggtctg ctcaaaaaac cgattaactg
     3901 gagattaatt ctcggattat acaaccatgc ttaaatttga acaagtgctc cattgtttgt
     3961 tgtttggtct ttcaagttat caacatgcac aaatcatttg gaatgtgtca agtctctagt
     4021 aagggtgttc ttcgttaaac ccaaaaaatc gaactgattg aaaaccgata aaaaccaaac
     4081 cgcatataat ttcgactttc gtttcagttt tagttcgatt ctactttttg aattcgggtt
     4141 aaactgaaaa tcggattcaa aaacgatttc aaaaccgaat tcaactaacg aattcaaaac
     4201 cgagttcaac taataatata ttaagtagta ataaatatag actacaaact tatcacaaaa
     4261 caaagtctaa tttaaattcg aattgatatg ttattttggt tagaatatga ttttctatga
     4321 tttatggttt aaccattcaa atttagtttt tggtttgggt ttagtttcga tttgagtttt
     4381 gaatttgggt ttggttaggt taggttaggt ttggttaggt taggtttggt tgtgctccaa
     4441 aacaaatttt aaaactaaac aaacgaactc aataaatcaa tgaagccgaa aattccaact
     4501 gatgatgtgt taagttctct ggtatatttc tattgagttt tgaatttggg tttggttagg
     4561 ttaggtttgg tttggttagg ttaggtttgg ttgtgctcca aaacaaattt taaaactaaa
     4621 caaacgaact caataaatca atgaagccga aaattccaac tgatgatgtg ttaagttctc
     4681 tggtatattt ctattggtac gactattttt gtatcataac atttcctaga tgacaaatgt
     4741 tattagaaac tcctctcttt tgaaaactta tatttgcaaa attctattag accactccca
     4801 acccttagtt attcaatcgt gattgtcgtc acaatccatg actgccgctg gcattcacgt
     4861 gttattggtt cgttatccat gatcggtgat tcactatgtc atgataaagc ataatggatg
     4921 gcgagagaat ttgggtttat ttgtattttt tg
//
LOCUS       XM_071886453            4038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine-specific demethylase
            JMJ26-like (LOC139904535), transcript variant X5, mRNA.
ACCESSION   XM_071886453
VERSION     XM_071886453.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4038
                     /gene="LOC139904535"
                     /note="lysine-specific demethylase JMJ26-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904535"
     CDS             169..3573
                     /gene="LOC139904535"
                     /codon_start=1
                     /product="lysine-specific demethylase JMJ29-like isoform
                     X5"
                     /protein_id="XP_071742554.1"
                     /db_xref="GeneID:139904535"
                     /translation="MEVLSHTENQDRRNGTREMNVWQKVPTNVLQHGRKRKVPDFTIS
                     QVRDDRESSMKRTKTSIQKEKFGIGFKTYHRRSLKKTCISSDSENIINTQKTCRIDDF
                     YGKSKSSLSKDTFGNDADDASDSDDDYEEDDDSDDDDFNPHSSHGRSKAYKGRQNIGR
                     RGSKGKRNSNKNKGDSNKKETLNRKQVSATNSSEESQEEEEFTGSKESRQPKTKNITK
                     TKKTFVNVADDASDSDDDYKEEDNDDDDDDDDDEEFTPNTSHGRSKASKCKGNKKRNS
                     NKNKGDSNKKETLKRKQVSVTDSSEESQGGEEVTRSKQCKQVDVNGTPHDKKISRRCC
                     AVSNRKSPLENRFVEWEDVISSASEYSDDDDDDDDDEEEEEEEEDDDDDDEEDDNEDE
                     EDEDVGDILTSMEHHDLKYNETEGSSRNSRLEKDVDFTENKNLALVKSNSSRSSSSAD
                     SNLKRTNKDSGDCYSASSGGTTSTVNNMKDQKLVKESLKCHQCKRNDRKTVVPCTNCN
                     ELVYCIQCIKQWYPQLSEEEIADLCPYCRGNCNCNLCLHSTFKTSNIDITPSDKLQHL
                     HYLIESLLPYLKEMRQEQIEEIAVEAHVQGVTESSVIIGQTSCLTDERVYCNHCSTSI
                     IDLHRSCPKCSYELCLGCCREIRKKGLLGPRKVKFGYFHRGFDYMHGEGSLQNSPLEN
                     NPSSPCNSLIEWVAEDDGTLFCAPKEMGGCGTHQPLELKRILQEDWISNLELKAECIL
                     DKFNGQRNYMKDSNTTGGEIYFKAANREDSNDNELYCPAHNDVITGEELNRFRHHWAK
                     GEPIIVRKTLDRTPGLSWEPMVMWRALCEHVDPSVSSKMSQVKAIDCLAGCEVEISTR
                     KFFRGYTEGRQYVNSWPEMLKLKDWPPSDKFDDLLPRHCEEFIIALPFHLYTDPRAGF
                     LNLAVKLPPGVLKPDLGPKTYIAYGMAEELGRGDSVTKLHCDMSDAVNILTHTAEVPV
                     SDNQKLAIRELKKRHRVQDELEMKDEREKNGICTDSIDGCLESEDELNGFSTDKPNDF
                     ALEDEEETGSALWDIFRRQDVPKLQEYLVKHSREFRHAYCCPVDQVYHPIHDQTFYLT
                     MEHKRRLKEEYGIEAWTFEQKLGDAVFIPAGCPHQVRNLKLLIGMG"
     misc_feature    1636..>1806
                     /gene="LOC139904535"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; Region: zf-4CXXC_R1; pfam10497"
                     /db_xref="CDD:463117"
     misc_feature    2851..3072
                     /gene="LOC139904535"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; Region: JmjC; smart00558"
                     /db_xref="CDD:214721"
     misc_feature    3268..3549
                     /gene="LOC139904535"
                     /note="RmlC-like cupin superfamily; Region:
                     cupin_RmlC-like; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 ccatcctcac tatgtacgta aactcctctt tctgttgacc taatttcaca atttctataa
       61 tccagattcc ctttcaatta tccgatcaaa ctattgtgtc ctcaatcgat gatctgttta
      121 tcgtgattac gtgctctcaa attcagcgga ttcaacgaat tcgtgaaaat ggaggtatta
      181 agtcatacag aaaatcaaga taggagaaat ggtactagag aaatgaatgt gtggcaaaaa
      241 gttccaacca atgttcttca acatggaaga aagagaaagg ttccagattt cacaatttca
      301 caggtaaggg atgaccgaga gtcgtcaatg aaaaggacaa aaacttctat ccagaaagaa
      361 aaattcggta ttggatttaa aacttatcat cgtaggagtt tgaaaaaaac atgtatttcg
      421 agtgattcag aaaatataat caacacacag aaaacttgta gaatcgatga cttttatggg
      481 aaatcaaaat cttctttaag caaggataca tttgggaatg atgctgatga tgccagtgac
      541 tctgatgatg attatgaaga agatgatgac agcgatgatg atgatttcaa tccacattca
      601 tcacatggaa gatcgaaagc gtataaagga aggcagaaca taggccgaag aggttcaaaa
      661 gggaaacgaa actcgaacaa gaataaaggt gattcaaaca aaaaagaaac gttgaacagg
      721 aagcaagttt cagcaactaa cagttcagaa gaaagccaag aggaagagga attcacgggc
      781 agcaaagaga gcagacaacc aaaaacaaaa aatataacta agacaaagaa aacatttgta
      841 aatgttgctg atgatgccag tgactctgat gatgattata aagaagaaga caatgatgat
      901 gacgatgatg atgacgatga cgaggagttc actccgaata catcacatgg aagatcgaaa
      961 gcctcaaagt gtaaaggaaa caagaaacga aactccaata agaacaaggg cgattcaaac
     1021 aaaaaagaaa cgttgaaaag aaagcaagtt tcagtaactg acagttcaga agaaagccaa
     1081 gggggagagg aagtcacacg cagcaaacag tgcaaacaag ttgatgttaa cggaaccccg
     1141 cacgataaaa aaatatctag aagatgttgt gctgtttcta atagaaagtc acctttggaa
     1201 aaccgttttg tagaatggga agatgtgata tcgtcagcaa gtgagtactc tgatgatgat
     1261 gatgatgatg atgatgatga ggaggaggag gaggaggagg aggatgatga tgacgatgac
     1321 gaggaggacg ataatgagga tgaggaggat gaggatgttg gcgatatttt gacctcaatg
     1381 gagcatcatg acttgaaata taatgagaca gaaggaagtt caagaaacag cagattagaa
     1441 aaagatgttg acttcacaga aaataaaaac ctggctttgg tgaaatctaa ttctagtaga
     1501 agcagtagtt cagctgattc aaatttgaaa agaacaaata aggactcagg agattgctat
     1561 tctgcttcat caggtggcac tacaagtact gtcaacaaca tgaaggacca gaaattagtg
     1621 aaggagagtt tgaaatgtca tcagtgtaag agaaatgata gaaagactgt tgttccctgc
     1681 accaattgta atgaattagt atattgtatc cagtgcatca agcaatggta tcctcaattg
     1741 tcggaagaag aaattgccga tttatgccct tattgtcgtg gaaactgcaa ttgtaacttg
     1801 tgtttacact caacttttaa gacatcaaac atagatatca ctcctagcga taagttgcag
     1861 catcttcact atctaattga gtcgctcctc ccatacctga aagaaatgcg tcaagaacaa
     1921 attgaggaaa ttgcggtgga agcacatgtt caaggggtaa ctgagtcatc agttataata
     1981 gggcagacta gctgtctcac tgatgaacgc gtctattgta accactgttc aacatcgatc
     2041 atagatcttc atcgaagttg tccaaaatgc tcatatgagt tatgtcttgg ttgctgtcgt
     2101 gagatacgta agaaaggtct tcttggtcca agaaaagtca agtttgggta ttttcacaga
     2161 ggttttgatt atatgcacgg ggaaggttct ttacaaaatt ctcctcttga aaataatcca
     2221 agtagcccct gtaattctct aatagaatgg gtagctgaag atgatggaac tttgttttgt
     2281 gctccaaaag aaatgggtgg atgcgggacc catcaacctt tggagctcaa gcgtatcttg
     2341 caagaggact ggatttcaaa tttggaacta aaagctgagt gtatattgga taaatttaac
     2401 ggtcagcgaa actatatgaa agattctaat acaactggtg gcgagatata ttttaaagca
     2461 gccaatagag aagattcaaa tgataatgaa ctatactgtc ctgcgcataa tgatgtcatc
     2521 accggtgagg agctcaatcg cttccgacac cactgggcta aaggcgaacc gataattgtt
     2581 aggaagactc tagatcggac accaggttta agctgggaac ccatggttat gtggcgtgca
     2641 ttatgtgaac atgtggatcc aagtgtcagc tcaaagatgt cacaagtgaa ggctattgat
     2701 tgcttggctg gttgtgaggt tgaaataagt acccgaaagt tttttagagg ctatacagaa
     2761 ggaagacaat atgtaaattc gtggcccgag atgctcaagc tgaaggattg gcctccatcc
     2821 gataagtttg atgatcttct accccgccat tgtgaagaat ttataatcgc attgcctttc
     2881 cacttgtata ctgatccaag ggcaggtttt ttaaatcttg ctgttaagtt accaccaggt
     2941 gtcttgaaac ctgatctggg tcccaaaaca tacattgcat atggaatggc tgaagaactt
     3001 ggaagagggg actctgtaac taagcttcac tgcgatatgt cagatgccgt gaatatattg
     3061 acacacacag ctgaagtacc agtaagtgat aatcagaagt tagcaatcag agagttaaag
     3121 aagcgacaca gagttcagga tgaactagaa atgaaagacg aaagagaaaa aaatggaata
     3181 tgtactgata gtattgatgg atgcttggaa agcgaagatg aactaaacgg attttcaacg
     3241 gataaaccta atgattttgc tttagaagat gaagaggaaa caggtagtgc tctttgggac
     3301 attttccgaa gacaagatgt tccaaagttg caggaatatc tagtgaagca ctccagagaa
     3361 tttcgacatg catattgttg tcctgttgat caggtttatc acccaattca tgatcaaaca
     3421 ttttatttga caatggaaca taaaaggagg ctaaaagagg aatatggcat agaagcctgg
     3481 acgtttgaac aaaagctggg agatgcggtt tttattcctg ctggatgtcc acaccaagtg
     3541 cggaatctta agttattaat aggtatggga taggtttgag gttcccaacc cctttaagaa
     3601 ttaaacaagc acggtggtca gccgcgatct gttcggttgc tgtgggtttg gttctctcat
     3661 tccatttttc tcgtcgttga gtctttaatg agcttgatgt tgttgccggc gttgttaact
     3721 tagttgactt cggcaaatag ttctcgggtt aggtgttctt gggttgcccg gtgattggtt
     3781 tgaatttacg gtttctacag gtcaagttgc gggttgaatt tgggatcggg tttatgtgta
     3841 tgtatttagg cttaggagtg gtggttttgt gtgtttgtca tctctattgt aattccaatg
     3901 tgctcgctct atatttatta tagtcgttca tagtgtttag aacgaacata gcgagattta
     3961 atgtgttttg gtcgtttgtg accaattact ttcacttcag atcgtcacga tctgcttact
     4021 gttgttccac cggatcct
//
LOCUS       XM_071886454            5067 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine-specific demethylase
            JMJ26-like (LOC139904535), transcript variant X6, mRNA.
ACCESSION   XM_071886454
VERSION     XM_071886454.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5067
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5067
                     /gene="LOC139904535"
                     /note="lysine-specific demethylase JMJ26-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139904535"
     CDS             169..3558
                     /gene="LOC139904535"
                     /codon_start=1
                     /product="lysine-specific demethylase JMJ29-like isoform
                     X6"
                     /protein_id="XP_071742555.1"
                     /db_xref="GeneID:139904535"
                     /translation="MEVLSHTENQDRRNGTREMNVWQKVPTNVLQHGRKRKVPDFTIS
                     QVRDDRESSMKRTKTSIQKEKFGIGFKTYHRRSLKKTCISSDSENIINTQKTCRIDDF
                     YGKSKSSLSKDTFGNDADDASDSDDDYEEDDDSDDDDFNPHSSHGRSKAYKGRQNIGR
                     RGSKGKRNSNKNKGDSNKKETLNRKQVSATNSSEESQEEEEFTGSKESRQPKTKNITK
                     TKKTFVNVADDASDSDDDYKEEDNDDDDDDDDDEEFTPNTSHGRSKASKCKGNKKRNS
                     NKNKGDSNKKETLKRKQVSVTDSSEESQGGEEVTRSKQCKQVDVNGTPHDKKISRRCC
                     AVSNRKSPLENRFVEWEDVISSASEYSDDDDDDDDDEEEEEEEEDDDDDDEEDDNEDE
                     EDEDVGDILTSMEHHDLKYNETEGSSRNSRLEKDVDFTENKNLALVKSNSSRSSSSAD
                     SNLKRTNKDSGDCYSASSGGTTSTVNNMKDQKLVKESLKCHQCKRNDRKTVVPCTNCN
                     ELVYCIQCIKQWYPQLSEEEIADLCPYCRGNCNCNLCLHSTFKTSNIDITPSDKLQHL
                     HYLIESLLPYLKEMRQEQIEEIAVEAHVQGVTESSVIIGQTSCLTDERVYCNHCSTSI
                     IDLHRSCPKCSYELCLGCCREIRKKGLLGPRKVKFGYFHRGFDYMHGEGSLQNSPLEN
                     NPSSPCNSLIEWVAEDDGTLFCAPKEMGGCGTHQPLELKRILQEDWISNLELKAECIL
                     DKFNGQRNYMKDSNTTGGEIYFKAANREDSNDNELYCPAHNDVITGEELNRFRHHWAK
                     GEPIIVRKTLDRTPGLSWEPMVMWRALCEHVDPSVSSKMSQVKAIDCLAGCEVEISTR
                     KFFRGYTEGRQYVNSWPEMLKLKDWPPSDKFDDLLPRHCEEFIIALPFHLYTDPRAGF
                     LNLAVKLPPGVLKPDLGPKTYIAYGMAEELGRGDSVTKLHCDMSDAVNILTHTAEVPV
                     SDNQKLAIRELKKRHRVQDELEMKDEREKNGICTDSIDGCLESEDELNGFSTDKPNDF
                     ALEDEEETGSALWDIFRRQDVPKLQEYLVKHSREFRHAYCCPVDQVYHPIHDQTFYLT
                     MEHKRRLKEEYGIEAWTFEQKLGDAVFIPAGCPHQVRNLKH"
     misc_feature    1636..>1806
                     /gene="LOC139904535"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; Region: zf-4CXXC_R1; pfam10497"
                     /db_xref="CDD:463117"
     misc_feature    2851..3072
                     /gene="LOC139904535"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; Region: JmjC; smart00558"
                     /db_xref="CDD:214721"
     misc_feature    3268..3549
                     /gene="LOC139904535"
                     /note="RmlC-like cupin superfamily; Region:
                     cupin_RmlC-like; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 ccatcctcac tatgtacgta aactcctctt tctgttgacc taatttcaca atttctataa
       61 tccagattcc ctttcaatta tccgatcaaa ctattgtgtc ctcaatcgat gatctgttta
      121 tcgtgattac gtgctctcaa attcagcgga ttcaacgaat tcgtgaaaat ggaggtatta
      181 agtcatacag aaaatcaaga taggagaaat ggtactagag aaatgaatgt gtggcaaaaa
      241 gttccaacca atgttcttca acatggaaga aagagaaagg ttccagattt cacaatttca
      301 caggtaaggg atgaccgaga gtcgtcaatg aaaaggacaa aaacttctat ccagaaagaa
      361 aaattcggta ttggatttaa aacttatcat cgtaggagtt tgaaaaaaac atgtatttcg
      421 agtgattcag aaaatataat caacacacag aaaacttgta gaatcgatga cttttatggg
      481 aaatcaaaat cttctttaag caaggataca tttgggaatg atgctgatga tgccagtgac
      541 tctgatgatg attatgaaga agatgatgac agcgatgatg atgatttcaa tccacattca
      601 tcacatggaa gatcgaaagc gtataaagga aggcagaaca taggccgaag aggttcaaaa
      661 gggaaacgaa actcgaacaa gaataaaggt gattcaaaca aaaaagaaac gttgaacagg
      721 aagcaagttt cagcaactaa cagttcagaa gaaagccaag aggaagagga attcacgggc
      781 agcaaagaga gcagacaacc aaaaacaaaa aatataacta agacaaagaa aacatttgta
      841 aatgttgctg atgatgccag tgactctgat gatgattata aagaagaaga caatgatgat
      901 gacgatgatg atgacgatga cgaggagttc actccgaata catcacatgg aagatcgaaa
      961 gcctcaaagt gtaaaggaaa caagaaacga aactccaata agaacaaggg cgattcaaac
     1021 aaaaaagaaa cgttgaaaag aaagcaagtt tcagtaactg acagttcaga agaaagccaa
     1081 gggggagagg aagtcacacg cagcaaacag tgcaaacaag ttgatgttaa cggaaccccg
     1141 cacgataaaa aaatatctag aagatgttgt gctgtttcta atagaaagtc acctttggaa
     1201 aaccgttttg tagaatggga agatgtgata tcgtcagcaa gtgagtactc tgatgatgat
     1261 gatgatgatg atgatgatga ggaggaggag gaggaggagg aggatgatga tgacgatgac
     1321 gaggaggacg ataatgagga tgaggaggat gaggatgttg gcgatatttt gacctcaatg
     1381 gagcatcatg acttgaaata taatgagaca gaaggaagtt caagaaacag cagattagaa
     1441 aaagatgttg acttcacaga aaataaaaac ctggctttgg tgaaatctaa ttctagtaga
     1501 agcagtagtt cagctgattc aaatttgaaa agaacaaata aggactcagg agattgctat
     1561 tctgcttcat caggtggcac tacaagtact gtcaacaaca tgaaggacca gaaattagtg
     1621 aaggagagtt tgaaatgtca tcagtgtaag agaaatgata gaaagactgt tgttccctgc
     1681 accaattgta atgaattagt atattgtatc cagtgcatca agcaatggta tcctcaattg
     1741 tcggaagaag aaattgccga tttatgccct tattgtcgtg gaaactgcaa ttgtaacttg
     1801 tgtttacact caacttttaa gacatcaaac atagatatca ctcctagcga taagttgcag
     1861 catcttcact atctaattga gtcgctcctc ccatacctga aagaaatgcg tcaagaacaa
     1921 attgaggaaa ttgcggtgga agcacatgtt caaggggtaa ctgagtcatc agttataata
     1981 gggcagacta gctgtctcac tgatgaacgc gtctattgta accactgttc aacatcgatc
     2041 atagatcttc atcgaagttg tccaaaatgc tcatatgagt tatgtcttgg ttgctgtcgt
     2101 gagatacgta agaaaggtct tcttggtcca agaaaagtca agtttgggta ttttcacaga
     2161 ggttttgatt atatgcacgg ggaaggttct ttacaaaatt ctcctcttga aaataatcca
     2221 agtagcccct gtaattctct aatagaatgg gtagctgaag atgatggaac tttgttttgt
     2281 gctccaaaag aaatgggtgg atgcgggacc catcaacctt tggagctcaa gcgtatcttg
     2341 caagaggact ggatttcaaa tttggaacta aaagctgagt gtatattgga taaatttaac
     2401 ggtcagcgaa actatatgaa agattctaat acaactggtg gcgagatata ttttaaagca
     2461 gccaatagag aagattcaaa tgataatgaa ctatactgtc ctgcgcataa tgatgtcatc
     2521 accggtgagg agctcaatcg cttccgacac cactgggcta aaggcgaacc gataattgtt
     2581 aggaagactc tagatcggac accaggttta agctgggaac ccatggttat gtggcgtgca
     2641 ttatgtgaac atgtggatcc aagtgtcagc tcaaagatgt cacaagtgaa ggctattgat
     2701 tgcttggctg gttgtgaggt tgaaataagt acccgaaagt tttttagagg ctatacagaa
     2761 ggaagacaat atgtaaattc gtggcccgag atgctcaagc tgaaggattg gcctccatcc
     2821 gataagtttg atgatcttct accccgccat tgtgaagaat ttataatcgc attgcctttc
     2881 cacttgtata ctgatccaag ggcaggtttt ttaaatcttg ctgttaagtt accaccaggt
     2941 gtcttgaaac ctgatctggg tcccaaaaca tacattgcat atggaatggc tgaagaactt
     3001 ggaagagggg actctgtaac taagcttcac tgcgatatgt cagatgccgt gaatatattg
     3061 acacacacag ctgaagtacc agtaagtgat aatcagaagt tagcaatcag agagttaaag
     3121 aagcgacaca gagttcagga tgaactagaa atgaaagacg aaagagaaaa aaatggaata
     3181 tgtactgata gtattgatgg atgcttggaa agcgaagatg aactaaacgg attttcaacg
     3241 gataaaccta atgattttgc tttagaagat gaagaggaaa caggtagtgc tctttgggac
     3301 attttccgaa gacaagatgt tccaaagttg caggaatatc tagtgaagca ctccagagaa
     3361 tttcgacatg catattgttg tcctgttgat caggtttatc acccaattca tgatcaaaca
     3421 ttttatttga caatggaaca taaaaggagg ctaaaagagg aatatggcat agaagcctgg
     3481 acgtttgaac aaaagctggg agatgcggtt tttattcctg ctggatgtcc acaccaagtg
     3541 cggaatctta agcattagtg atagaagaaa gtgttgacgt agcgctgaga tggaagtcag
     3601 ttatagaata atatgtcatg gttggcagtc gatgtggcga tttagtgact agcccgtccg
     3661 tatttgaaga caaatgttta ataagtcggg cgaatgtgta aagatggtca aagctaggag
     3721 aagtctggtc aacgtcgatc aaaagttgag tttttgtctg accttgttca agtgtaaacc
     3781 aaaattctaa gctcatttac aaattagatg ggaaaacacc gacttgtgtc ctattcatac
     3841 ctatatataa ttcaaactag cacaacatct tatttaagta gataattact ccctctgttt
     3901 aatattaata gttcactatt ttattttgag atgttttaaa ctaatagttc gtttctacaa
     3961 gtagataaaa aaaataatga attaaagttc ttatatgtcc ttaacacttg catccaaggt
     4021 tgcaaaattc gtattcgggg attaatcggt caggactttg gaaggattaa acggcaattc
     4081 ggggataaat cggattgtac tttatgcatt taaatattaa atttaaaaaa ttatatgtgt
     4141 aaatatagaa gaaaatcata aacataaact ttaacataat tgtctaaatt tgttcattat
     4201 tttcaaaaac tataaatttc tagtttaaat ttaaatacat gttaaaatgc tgacctattt
     4261 tgattttgac cgattttgat tacaaattcg attttgaccc atcaattgac gttgcccaat
     4321 taattaaacg gattttagaa aatcggaacg ggatgttctt aaaaatgatt aatcgaggat
     4381 taatcggcga gtaatcgggt tttttacaac actgcttgca tctaagacaa aaatataggt
     4441 aaaaagtaaa gagtaaaacg gtaaagtaaa taaaaagtat aatgtaataa ttagatttct
     4501 catgtaagct atatactgga tcttatgttt tatgaagtgt ttagtaaatt aattgaagtt
     4561 gatatatgta aaatgatata taaggacaca aataaattgg cataacgata taatggataa
     4621 tggtgtagtt tcgtatatga taagctcttc ttgttttttc agagcttata tttttcataa
     4681 gctcttgaat aagctactat caaacaatgc tactagtttg agcttataaa aaattaggat
     4741 taagttctca taagctacta aaaggtcgtg cgccaaacac accctatatc aaattcaaaa
     4801 tatcatcagt aatactcccc aatagttcat gaataaaatg cacacggatt aagaaatgtc
     4861 atcatcacaa tatttgttta ctttacagtt ttacctctaa ctttttacat ataattttgt
     4921 tttatataca aaaataaggg gtacaaataa actttaactc gttattctta ttaactatta
     4981 atttgaacta ttaaaaaata aaataaaact attaaattga ggactgaggt tcccatcccc
     5041 ttgaattaaa ataccccttt attatgt
//
LOCUS       XR_011778856             514 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904537), transcript variant X1, ncRNA.
ACCESSION   XR_011778856
VERSION     XR_011778856.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..514
                     /gene="LOC139904537"
                     /note="uncharacterized LOC139904537; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904537"
     ncRNA           1..514
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904537"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904537"
ORIGIN      
        1 aaaataattt tggagagagg aaattaacat ttacccaaaa aaatttcacg ggacaagata
       61 ttgaaaatac aagaataaag gaaaattgat cagatgaacc tttttgaagt ttttcatcat
      121 tttctagatt cgtgaggaaa aaagagctac cttaacacaa ataaacttag ccctaatttc
      181 gattaagggt gtgtttcgac gaaagtagct ggagctggag ctggagctta tgagcaggag
      241 ctggagctta tttttgaagc tggtagctgg agcttattat tttttataaa tgtttggtaa
      301 attagctgga gcttattttt cagttcataa gctctacttt ttttcataag ctactacaag
      361 tagctaattt tttcagagct tatgattttc ataagctcta cttttttttg tctaccaaac
      421 gaagcttata acttagagct tattaaaatt ataagctcaa gctctcataa gcatctataa
      481 gttccaataa gctacgcgct aattttgacc ttga
//
LOCUS       XR_011778857            4845 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904537), transcript variant X2, ncRNA.
ACCESSION   XR_011778857
VERSION     XR_011778857.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4845
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4845
                     /gene="LOC139904537"
                     /note="uncharacterized LOC139904537; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904537"
     ncRNA           1..4845
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904537"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904537"
ORIGIN      
        1 aaaataattt tggagagagg aaattaacat ttacccaaaa aaatttcacg ggacaagata
       61 ttgaaaatac aagaataaag gaaaattgat cagatgaacc tttttgaagt ttttcatcat
      121 tttctagatt cgtgagtatg gagcaaggtt gaagaaattg gaactcgggt agttctcagc
      181 ggaaacattt cttggagttc ggggaggcgg ttaactttcg ttaacttttg ggataatttt
      241 tatgatactc gagatttgac cacgttttga ctgatttgac cgagagttga ccgatttgat
      301 caagatttga ccgatttttg gccaagaaac tcaatttatc ggtcgttgac agattaaacc
      361 ggtcgttgac cgaatttttg gccgatttca aaacgagaac ttggcagcaa ctccaaaaca
      421 atttctcggc gaaaactctg ccgatttttt tgatttttgc aaccttgttg ctggggtggg
      481 ctggttatga agatcgacta gttggcgatg acttggccgc tttttgaaac aatgttaaat
      541 tgaaaggtgg gagcaaggca ccttgcgttt gccgagaagc aaggtcgcaa gagcaccttg
      601 cgtcttccgg gagtaagggc aaaaagtacc tacgtcttgc gcggacaaaa tctcaaaatc
      661 tctagtttgt gagttctgat gtgaaaaaaa gttgaaaaat gggcattcag gcgataaact
      721 caaataaaaa ttatagaaat gcgaaacttc taacaaaaat ctatatctta ttttttaatg
      781 tgtatatagc ctacatcggg acataatata tacctaatca ataatttatc aatggtagat
      841 tttgtgataa cttagacaac cgtataaaat gtcacgcttc atagaacaag tatgccaagt
      901 gtgatgaagg ttgtaaaaac aaattttcac gttattaata aataattatc acaattgtga
      961 tcaaggttgt aaaagtagct agtggagact aggtattaac cttgtaagga ctaatcagtc
     1021 aagtggataa tagctaggat cgttcggacg ttgaccaact tcaactttta ctttatatga
     1081 ccgttgaccg gttataatga attcttgaca actttttacc gaattaatcg acaaattcag
     1141 ggactaatcg gggcttttta aaaatcctaa gtattggcct agtcggcgga cttttacaac
     1201 catgaatgta actatacaaa aataatatgc ctgaacatta aactatcatt attgaaagtt
     1261 tagtgtcgga ctgtaattga atacattgac taatccctac attcaatttt attgctatat
     1321 ttactacggt gtacaaagag ccttatcatt acttacaaat gttgctagct taacattggg
     1381 ctcagtgtta aatctcagtg ttaagcttaa ctctgagatt taacactgag gtcaaaacag
     1441 gaaaaatcgt ttagtgttaa atttcagtgt taaatcaatt ataattatta aaaaaaaata
     1501 tttaatgaat atatccgttg aataacggat atattttcaa aaagcaacta aaatcacaac
     1561 gttacacaag caacggtggg aggcgaagcc ggcctctaac ggcgatttaa cgccggcgcg
     1621 gaatcgggga gcccacattc cccggtgtta aattgtgaaa aagccgaaaa aattgatcga
     1681 ctcctggtgc tctaataatg tgtaatcgta ttttttatga ccactccata tctttcacta
     1741 aactctttta tccttctcta aacaatatca acgaatatac ctcacaaata taaaatgtat
     1801 taccaaacac aatttataaa ataaaaaagt aatgcgtccc acccatgtcc gtgaagctat
     1861 tgtgagctca ctcatcaaat tcctttcact tggtgtttca tctggtgatg cctatccaag
     1921 tgaaacttta attttgagtc aaaccgtttt gagtggtcta atagacttta ttacatagct
     1981 tatgccagat cgtgtttcct tagacagtta gaccaaaaca catgcagaag ctctgttttt
     2041 aatgaatcag atttatcttt tcggttcaca ccttttcatt gggcaaaaaa tgcaacatac
     2101 atgatagatg aacgattgaa tcacacgatc gtttttttac cacaatttat tgtatctcag
     2161 actttagaat gagtcaaaag agcatataat ttctcaatga tgtcttaaat gaaaatgttc
     2221 acaacctgaa atttgataac atcaaaaata ggttgaaact tgggaagtac ctgtttgatg
     2281 atcatgctaa caagtttgat caactattaa tttgtttaac gggtttggtt ttcacaaatg
     2341 ggaatcaaac ccaccatttc aaacaatttt ccaaacccaa gtggaatggt ggtttggaaa
     2401 tctagcataa acacgcagac acattttgac attaagcata tacaccccct taattttttt
     2461 tattttttat tttttttttt gcgaaaaaac gaaaaatgag gacatttttc aaaagaagac
     2521 gtcattaaag agaatacaaa agaagacggg gggtaaacgg gaaggctcac gcctaaaaag
     2581 caatcaacta aacaaaaaaa aaaaaaacat atataagctt aataaaaata taacataata
     2641 cccctttaat aagttatatt accagcataa cataatacca aaaccccaaa caaccattta
     2701 ttagttgtat tatccaaaac ctataataca agctttatgc ttgtttcgac atagctaacg
     2761 acaccacaaa caccaagtcc aaaaaacaaa agaagatata gaaagattta ctgtatttct
     2821 actactcaaa acgacaccac actactgaat tagttcaggt gggtctggaa gcagatgggt
     2881 tgggttgcat actaccacgt cactataaat accttttatt taatctataa tttctggtca
     2941 gttgacaact tttcaaagtc ggtaacggct tgatgcatag catacatgat catcttcttt
     3001 acctgcattt tcaaaaatta gaattagaaa tataaactat acttagattt gttgactagt
     3061 tttacatggt gaattagacc aagcgagtgg tatggaattt tgttacctct agtttgtctt
     3121 ctttagcttt atgattaatg ggcagttgac ggaactcttc tgttagtcgc atgcattctg
     3181 atatgttctc tggagaaaca aagtccactg caactttggt acatgactag aaaaaaacaa
     3241 gcaaaacgga ccactttgta agcattttga tatgcaagga tcatcatgca tttgaaatca
     3301 ataaacaagt aggtttctat aaattcactg gcaaatgaca tagtaggatg ataatagtta
     3361 aaatgttagt atgcatcaag ctagacatat cattaaagtg cgtgaattat attatcttgt
     3421 tagaacccga tgttcaaggt caattacagc acctttacat gtgttctttg agtacaggtt
     3481 agacaaccct taataaaaat attgtgattt cagtttcttt tagttatatg ccaaaggacc
     3541 gttagcggta tctaggaacc ccttcaactg agaggttatg agttcgagta cagaggtgga
     3601 cacttgttaa tattagtgaa acattcatgt aggtgtcggg gtgtgttagc atgcgtttct
     3661 taaaaaaaaa taatccttta cttatataaa ccattgttgt aaaagtcaag tcaatcgact
     3721 agtctgatta gtccctgacc aattgagttg gcgactagtc cgacttgaat aggcccaagt
     3781 tggtcagagt cgtgatgaaa ttcggttaac gggtcaaaat cagtcaaagt aagtcaatag
     3841 ccgactagtc cgtaaaaagt ccaatttggc tcgtccccaa tcagtgactt ttacaacctt
     3901 gtttccaatt aacaaaaagt taataatttt gaaaagagct ttagtttatg attatttgaa
     3961 tcttttagaa ctttttaaat aaatatcact aatcgtatgc ctaaatatta ctccctctgt
     4021 cttacaaaaa ctgcccaaaa ttattatatt ttaatcaaaa taacaataaa aaattattaa
     4081 agtttcaatc atgccctttt tattattgga aatttaacat taaatataaa aattaattta
     4141 ttagttactc tttataacaa tattaaatga aagacaaatt aaataattta ataatatatc
     4201 ttaaatcaaa caaatagtca aatatgacat ttttatggga ctcggggaat ataaaaatat
     4261 acatacaaat ttttagcgtc tttttatcga taattaagga tcccgcaaac tatctttact
     4321 gacaatgtta tttttaaatc ttttttgggc cttaaaaaat acatataatc acatatgatt
     4381 tatgagtgtt gataaatcaa actctaatat tgatttatga gtgatccata tacacttcat
     4441 aaatggtcaa aattagtatt tgaccatttt gaatgcaagg aagatagtgg tggtggtttg
     4501 cgtataaagt gcagttaaaa attagagtac atttatttag gataaaatat agcacaattt
     4561 tcaaaaaagt caaagtgatt ggaccttttg gtccaaagga ctgtacccgt cctaaatatc
     4621 aatatataac cttttgacaa gagatgatat tatataagtt ttcttttatg taatttatgt
     4681 ttttatgttt ttttacggct ttatataatt tatgttagtt atattattat tatatatatt
     4741 atggagtatt atattatata ctcccttagt tttatattta ttaatctcca gacaaaaatt
     4801 atatattata aaaaaaaatg gaccgtcaca tttatatttt gttaa
//
LOCUS       XR_011778858            4514 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904537), transcript variant X3, ncRNA.
ACCESSION   XR_011778858
VERSION     XR_011778858.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4514
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4514
                     /gene="LOC139904537"
                     /note="uncharacterized LOC139904537; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904537"
     ncRNA           1..4514
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904537"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904537"
ORIGIN      
        1 aaaataattt tggagagagg aaattaacat ttacccaaaa aaatttcacg ggacaagata
       61 ttgaaaatac aagaataaag gaaaattgat cagatgaacc tttttgaagt ttttcatcat
      121 tttctagatt cgtgagttgc tggggtgggc tggttatgaa gatcgactag ttggcgatga
      181 cttggccgct ttttgaaaca atgttaaatt gaaaggtggg agcaaggcac cttgcgtttg
      241 ccgagaagca aggtcgcaag agcaccttgc gtcttccggg agtaagggca aaaagtacct
      301 acgtcttgcg cggacaaaat ctcaaaatct ctagtttgtg agttctgatg tgaaaaaaag
      361 ttgaaaaatg ggcattcagg cgataaactc aaataaaaat tatagaaatg cgaaacttct
      421 aacaaaaatc tatatcttat tttttaatgt gtatatagcc tacatcggga cataatatat
      481 acctaatcaa taatttatca atggtagatt ttgtgataac ttagacaacc gtataaaatg
      541 tcacgcttca tagaacaagt atgccaagtg tgatgaaggt tgtaaaaaca aattttcacg
      601 ttattaataa ataattatca caattgtgat caaggttgta aaagtagcta gtggagacta
      661 ggtattaacc ttgtaaggac taatcagtca agtggataat agctaggatc gttcggacgt
      721 tgaccaactt caacttttac tttatatgac cgttgaccgg ttataatgaa ttcttgacaa
      781 ctttttaccg aattaatcga caaattcagg gactaatcgg ggctttttaa aaatcctaag
      841 tattggccta gtcggcggac ttttacaacc atgaatgtaa ctatacaaaa ataatatgcc
      901 tgaacattaa actatcatta ttgaaagttt agtgtcggac tgtaattgaa tacattgact
      961 aatccctaca ttcaatttta ttgctatatt tactacggtg tacaaagagc cttatcatta
     1021 cttacaaatg ttgctagctt aacattgggc tcagtgttaa atctcagtgt taagcttaac
     1081 tctgagattt aacactgagg tcaaaacagg aaaaatcgtt tagtgttaaa tttcagtgtt
     1141 aaatcaatta taattattaa aaaaaaatat ttaatgaata tatccgttga ataacggata
     1201 tattttcaaa aagcaactaa aatcacaacg ttacacaagc aacggtggga ggcgaagccg
     1261 gcctctaacg gcgatttaac gccggcgcgg aatcggggag cccacattcc ccggtgttaa
     1321 attgtgaaaa agccgaaaaa attgatcgac tcctggtgct ctaataatgt gtaatcgtat
     1381 tttttatgac cactccatat ctttcactaa actcttttat ccttctctaa acaatatcaa
     1441 cgaatatacc tcacaaatat aaaatgtatt accaaacaca atttataaaa taaaaaagta
     1501 atgcgtccca cccatgtccg tgaagctatt gtgagctcac tcatcaaatt cctttcactt
     1561 ggtgtttcat ctggtgatgc ctatccaagt gaaactttaa ttttgagtca aaccgttttg
     1621 agtggtctaa tagactttat tacatagctt atgccagatc gtgtttcctt agacagttag
     1681 accaaaacac atgcagaagc tctgttttta atgaatcaga tttatctttt cggttcacac
     1741 cttttcattg ggcaaaaaat gcaacataca tgatagatga acgattgaat cacacgatcg
     1801 tttttttacc acaatttatt gtatctcaga ctttagaatg agtcaaaaga gcatataatt
     1861 tctcaatgat gtcttaaatg aaaatgttca caacctgaaa tttgataaca tcaaaaatag
     1921 gttgaaactt gggaagtacc tgtttgatga tcatgctaac aagtttgatc aactattaat
     1981 ttgtttaacg ggtttggttt tcacaaatgg gaatcaaacc caccatttca aacaattttc
     2041 caaacccaag tggaatggtg gtttggaaat ctagcataaa cacgcagaca cattttgaca
     2101 ttaagcatat acaccccctt aatttttttt attttttatt tttttttttg cgaaaaaacg
     2161 aaaaatgagg acatttttca aaagaagacg tcattaaaga gaatacaaaa gaagacgggg
     2221 ggtaaacggg aaggctcacg cctaaaaagc aatcaactaa acaaaaaaaa aaaaaacata
     2281 tataagctta ataaaaatat aacataatac ccctttaata agttatatta ccagcataac
     2341 ataataccaa aaccccaaac aaccatttat tagttgtatt atccaaaacc tataatacaa
     2401 gctttatgct tgtttcgaca tagctaacga caccacaaac accaagtcca aaaaacaaaa
     2461 gaagatatag aaagatttac tgtatttcta ctactcaaaa cgacaccaca ctactgaatt
     2521 agttcaggtg ggtctggaag cagatgggtt gggttgcata ctaccacgtc actataaata
     2581 ccttttattt aatctataat ttctggtcag ttgacaactt ttcaaagtcg gtaacggctt
     2641 gatgcatagc atacatgatc atcttcttta cctgcatttt caaaaattag aattagaaat
     2701 ataaactata cttagatttg ttgactagtt ttacatggtg aattagacca agcgagtggt
     2761 atggaatttt gttacctcta gtttgtcttc tttagcttta tgattaatgg gcagttgacg
     2821 gaactcttct gttagtcgca tgcattctga tatgttctct ggagaaacaa agtccactgc
     2881 aactttggta catgactaga aaaaaacaag caaaacggac cactttgtaa gcattttgat
     2941 atgcaaggat catcatgcat ttgaaatcaa taaacaagta ggtttctata aattcactgg
     3001 caaatgacat agtaggatga taatagttaa aatgttagta tgcatcaagc tagacatatc
     3061 attaaagtgc gtgaattata ttatcttgtt agaacccgat gttcaaggtc aattacagca
     3121 cctttacatg tgttctttga gtacaggtta gacaaccctt aataaaaata ttgtgatttc
     3181 agtttctttt agttatatgc caaaggaccg ttagcggtat ctaggaaccc cttcaactga
     3241 gaggttatga gttcgagtac agaggtggac acttgttaat attagtgaaa cattcatgta
     3301 ggtgtcgggg tgtgttagca tgcgtttctt aaaaaaaaat aatcctttac ttatataaac
     3361 cattgttgta aaagtcaagt caatcgacta gtctgattag tccctgacca attgagttgg
     3421 cgactagtcc gacttgaata ggcccaagtt ggtcagagtc gtgatgaaat tcggttaacg
     3481 ggtcaaaatc agtcaaagta agtcaatagc cgactagtcc gtaaaaagtc caatttggct
     3541 cgtccccaat cagtgacttt tacaaccttg tttccaatta acaaaaagtt aataattttg
     3601 aaaagagctt tagtttatga ttatttgaat cttttagaac tttttaaata aatatcacta
     3661 atcgtatgcc taaatattac tccctctgtc ttacaaaaac tgcccaaaat tattatattt
     3721 taatcaaaat aacaataaaa aattattaaa gtttcaatca tgcccttttt attattggaa
     3781 atttaacatt aaatataaaa attaatttat tagttactct ttataacaat attaaatgaa
     3841 agacaaatta aataatttaa taatatatct taaatcaaac aaatagtcaa atatgacatt
     3901 tttatgggac tcggggaata taaaaatata catacaaatt tttagcgtct ttttatcgat
     3961 aattaaggat cccgcaaact atctttactg acaatgttat ttttaaatct tttttgggcc
     4021 ttaaaaaata catataatca catatgattt atgagtgttg ataaatcaaa ctctaatatt
     4081 gatttatgag tgatccatat acacttcata aatggtcaaa attagtattt gaccattttg
     4141 aatgcaagga agatagtggt ggtggtttgc gtataaagtg cagttaaaaa ttagagtaca
     4201 tttatttagg ataaaatata gcacaatttt caaaaaagtc aaagtgattg gaccttttgg
     4261 tccaaaggac tgtacccgtc ctaaatatca atatataacc ttttgacaag agatgatatt
     4321 atataagttt tcttttatgt aatttatgtt tttatgtttt tttacggctt tatataattt
     4381 atgttagtta tattattatt atatatatta tggagtatta tattatatac tcccttagtt
     4441 ttatatttat taatctccag acaaaaatta tatattataa aaaaaaatgg accgtcacat
     4501 ttatattttg ttaa
//
LOCUS       XR_011778859             326 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904538), ncRNA.
ACCESSION   XR_011778859
VERSION     XR_011778859.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..326
                     /gene="LOC139904538"
                     /note="uncharacterized LOC139904538; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904538"
     ncRNA           1..326
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904538"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904538"
ORIGIN      
        1 ccaaaatgaa agcaaataca tatataaata ttgacgcaca tactagcaca tcgtttgatt
       61 ttagcttctc gaattgatag caagctcctt ggtgtatgaa ctattttcat attccgaaac
      121 aagataatat aaggtgataa gagtaagcag aagactcagt aatattagac cactgagtac
      181 ttgtggatat cggttgatgg ttatatcatg ctactttttg ggtgaagatg ggatgtctag
      241 tggatatgtt tgacaacctt tggaaatctg atgtcgtgat tttgtaataa aggaactgtt
      301 ttgttaagta acaccatatt gtgggt
//
LOCUS       XM_071886456             819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904539), mRNA.
ACCESSION   XM_071886456
VERSION     XM_071886456.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..819
                     /gene="LOC139904539"
                     /note="uncharacterized LOC139904539; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904539"
     CDS             162..545
                     /gene="LOC139904539"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742557.1"
                     /db_xref="GeneID:139904539"
                     /translation="MELETALQVSEDWEGVDLDEKLNNLQTELMNAEEKLQELKKTEI
                     EITLCLGVKDDELDDARKELIDEIKTRHKRNNICVKTVNPGNEKCTSEQKLWNKKEDR
                     EATLKECIEPMLKKWKTEKKQLSRD"
     misc_feature    <321..527
                     /gene="LOC139904539"
                     /note="XH domain; Region: XH; pfam03469"
                     /db_xref="CDD:460934"
ORIGIN      
        1 agagagaggt attgtctagg tccaaacaat tgggcatcga atctcactcc tacaagaaag
       61 aatcagaaga tctaaagagg gaactagaaa agcttcatgc acggacaaca gagttggagg
      121 agcaacttaa gattaaggat gaaaaattag aaattgcaaa tatggaactt gaaaccgctt
      181 tacaggtttc tgaagattgg gaaggtgtgg acctagacga aaagttaaat aatttgcaga
      241 ctgagttgat gaatgcagaa gaaaaacttc aagagttgaa aaagacggaa atagagatta
      301 ctttgtgtct cggggtaaag gatgatgagc tggacgacgc ccgtaaagag ctcattgatg
      361 aaattaagac gaggcataag cgaaataaca tctgcgtcaa gacagtgaac ccaggtaacg
      421 aaaagtgtac ttcagagcag aaactatgga ataaaaaaga agacagggaa gcaactctga
      481 aagaatgcat tgagcctatg ttgaagaaat ggaagaccga aaaaaaacaa ctgagtaggg
      541 attaaacggt tcactattca cttgtttgaa tgcctgtgtt gtctgccttt tgttagtatt
      601 caggcatgtg agaaagatgc tggtttttgt tagccgcggt caaacgttga ctgatagtgg
      661 ccttttgtta aactaagtat gcctagttaa aaatcgaaac taattgtacg gtgattgtgt
      721 tcttatgttt cttgtattgc atgcagactt gtttcaacag attgttaagt aagtgtaatg
      781 ggtttacatg tatgtgatta tgaaatagta gatgattat
//
LOCUS       XM_071886457            1191 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides monooxygenase 1-like
            (LOC139904540), mRNA.
ACCESSION   XM_071886457
VERSION     XM_071886457.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1191
                     /gene="LOC139904540"
                     /note="monooxygenase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904540"
     CDS             1..1191
                     /gene="LOC139904540"
                     /codon_start=1
                     /product="monooxygenase 1-like"
                     /protein_id="XP_071742558.1"
                     /db_xref="GeneID:139904540"
                     /translation="MDNNNNDEVVIIGAGICGLATALALYRKGIKSVVMERSESLRNT
                     TGTSIITWQNGWRALEQLGVAETLRRTAVPIQTEQVVWLNEGKQEESPVNHEFRGLLR
                     KDLINSLYNALPPDTVKFGCQLESIKMDLDTNKPVIRFINGTSITPKVVIGCEGGNSI
                     VANFLNVKPTKLTSLCVVRGLTNYPNGHSFDRKFTRFHKNNIIVGRYQRDDNMVFWFC
                     VHPYIPKDRRNWDDPEVIRRSTMKLLNDFPPEVQSMIEKAESNSLSYIRIRYRTPWDL
                     FMGTFSKGTVTVAGDAMHIMGPFMGQGGSAGLEDTVVLARNMARLGLNGERKITVQGV
                     EEAFKIYVKERRMRVVQLSLQTYLTGLIFGASSSTTKVLYFVLLSVLFRNSNGHIDYD
                     CGVL"
     misc_feature    25..1149
                     /gene="LOC139904540"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion]; Region:
                     UbiH; COG0654"
                     /db_xref="CDD:440419"
ORIGIN      
        1 atggataata ataataatga tgaagtggtg ataattggag caggtatttg tgggttagca
       61 acagccctgg ctctttatag aaaaggaata aaaagtgtag taatggaaag atctgagagc
      121 ttgcgaaaca ccaccggaac atcaatcata acctggcaaa atggttggcg agctcttgaa
      181 caactcggtg tcgctgaaac cctccgtcgc actgctgtcc ctattcaaac ggaacaagta
      241 gtatggctta atgagggaaa acaggaagaa agcccagtga atcatgaatt tcgtggctta
      301 ttgaggaaag atcttataaa ctctctttat aatgcccttc ctccggacac tgtaaagttt
      361 ggttgccaac ttgagtctat aaaaatggat ctggatacta ataaaccagt tattcggttc
      421 atcaatggaa cctccattac acccaaggtt gtaattggtt gtgaaggtgg caactcaatt
      481 gttgccaact ttcttaacgt taagcctaca aaattaactt cgttgtgtgt agttagaggt
      541 ttaacgaatt accctaatgg ccattcgttt gatcgtaagt ttactcgttt ccataagaac
      601 aatatcattg tgggaagata tcaaagagat gataacatgg ttttctggtt ttgtgtacac
      661 ccttatattc ctaaagatag aagaaattgg gatgatcccg aggtaatccg tcggtcaact
      721 atgaagttgc taaacgattt tccaccagaa gttcaatcaa tgatcgaaaa agcggagtca
      781 aattcactat cttatatacg cataagatat cgcacaccat gggacttatt tatggggaca
      841 ttttctaaag gaacggtgac agttgctggt gatgcgatgc atatcatggg tccatttatg
      901 ggtcaaggtg gttcagcagg gttagaagat acagtagtgc tggctagaaa catggctcgg
      961 ttgggtttga atggtgaaag aaagataaca gtccaaggtg ttgaagaagc ttttaagatt
     1021 tatgtaaaag aacgaaggat gagagtggtt caattgtcgt tgcaaactta cctcacaggc
     1081 ctgatatttg gcgctagttc aagtactacg aaggttttat atttcgtatt attgtctgtt
     1141 ctgtttcgca actcaaatgg tcatattgat tatgattgtg gtgttctttg a
//
LOCUS       XM_071886458            2711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904541), mRNA.
ACCESSION   XM_071886458
VERSION     XM_071886458.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2711
                     /gene="LOC139904541"
                     /note="uncharacterized LOC139904541; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904541"
     CDS             48..1589
                     /gene="LOC139904541"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742559.1"
                     /db_xref="GeneID:139904541"
                     /translation="MNKKGLAILLRSKMRPLSPVSNKVNRLQFAPLEENKIDNQNASS
                     NTPRDFGQVRASMHSVISMNKKEILDTALTEFSQGYFSLSKENRHKLLLILAREYDLN
                     RTQVQELMKQYIGLEMPNSDVNDEHVHEMEGQLSSFYRIERNLRHALNPMYAVLFERL
                     NTHPGGLKFLATVRADILSIIADENIASIRALDSYLKEKLITWLSPANLELHQITWDD
                     PASLLEKIVAYEAVHPISNLIDLKRRLGVGRRCFGYIHPAIPGEPLIFIEVALMKNIA
                     STIQEVLWHDPPTPECEATTALFYSISSTQPGLAGINLGKFLIKRVIYLVKKDMPNIS
                     NFATLSPIPGFMQWLLSKLASSERTDLIFCENVLKPEEESALVDAYADATAGQNGMEV
                     LLHLLTSNNYEWTQSDKLVSKLEPILLRLCARYLLNEKKRGKALDSVANFHLQNGAMI
                     GRLNWMADQSVKGLSQSGGIMVNYIYSLEHIEDYAQAYFSTGHIQASPDVLRYIEPLG
                     EDEGK"
     misc_feature    <471..656
                     /gene="LOC139904541"
                     /note="Malonyl-CoA decarboxylase N-terminal domain;
                     Region: MCD_N; pfam17408"
                     /db_xref="CDD:465421"
     misc_feature    666..1475
                     /gene="LOC139904541"
                     /note="Malonyl-CoA decarboxylase C-terminal domain;
                     Region: MCD; pfam05292"
                     /db_xref="CDD:461613"
ORIGIN      
        1 ctagaaattc gttttaacca aaatattctt gaatcttaag gattattatg aacaagaaag
       61 gtcttgcaat tttattgcgt tctaaaatga gacctctttc acctgtatct aacaaagtaa
      121 accggttgca atttgctcct ctagaagaga acaaaataga taatcaaaat gcctccagca
      181 acaccccgag agattttggg caagtacgag catcaatgca ttcagttata tcaatgaaca
      241 aaaaagagat attggatact gcactaactg aattctcaca ggggtatttt agtctttcta
      301 aggaaaaccg tcacaaatta ctactaattc ttgctagaga gtatgatctc aatcggacgc
      361 aagttcaaga gttgatgaag caatatattg gtcttgagat gcctaacagt gatgtgaatg
      421 atgagcatgt gcatgaaatg gaagggcaac tttcttcttt ttatagaatc gaaagaaatt
      481 tgagacacgc tcttaatcca atgtacgcag ttctatttga aagactcaac acccaccctg
      541 gtggtttgaa gtttttggct actgttagag ctgatatttt atctattatc gcggatgaaa
      601 atattgcatc gatacgagct ttggactcat atttgaaaga aaagcttatt acatggctaa
      661 gtccagccaa cctggagctt caccaaataa catgggacga tcctgcttct ttgttagaga
      721 agattgtagc atacgaggct gtgcatccta ttagtaatct aatagattta aagaggaggt
      781 tgggagttgg tcgccgctgt tttggataca tacatccggc tatacctggt gaaccactta
      841 tttttattga agttgcactt atgaagaata tagcttcgac aatacaggaa gtattgtggc
      901 atgatcctcc gacacctgaa tgtgaagcaa ctactgcatt attctactct atttcgtcaa
      961 ctcaacctgg cctagcagga attaacttag gaaaattcct cattaaacga gtaatatatc
     1021 tggtgaagaa agacatgcca aatatatcta attttgcaac tctaagtcca atcccaggct
     1081 tcatgcaatg gcttctatct aagttggcat catctgaaag aactgacctt attttctgtg
     1141 agaacgttct caaacctgag gaagaaagtg cgctagtgga tgcatacgcg gatgcaactg
     1201 caggacaaaa tggcatggaa gtgctgttgc acctgttgac ctcaaataac tacgagtgga
     1261 ctcaatctga taaacttgtg tctaaattag aaccgatact attaagattg tgtgccagat
     1321 acctactgaa cgagaagaag agagggaaag ctttagattc tgttgccaat ttccacttgc
     1381 aaaatggagc tatgattggt cgactaaatt ggatggccga tcagtcggta aaaggcctta
     1441 gtcaaagtgg aggaatcatg gtcaattata tctacagtct ggaacatatt gaagattatg
     1501 ctcaagcata tttcagcaca ggtcatatcc aagcttcccc tgatgtcctt cgatatatcg
     1561 agccactggg ggaggatgaa ggtaaataaa taaggcagta aatatagatg ttgatgaacg
     1621 tgtttatctc gtcaccaagg tttgtagctt gtaaacagcg tgttctgata ctttgcaata
     1681 agttgtattt tatttaatta cagtgtataa tgataccaat ggtttgcatt acacataatg
     1741 taaatagaca tgatcggatg taacacttaa atagaaacca taataatttg tagtatattt
     1801 tccatcacac gagcaacatc atttttcact ttctacatgg cttgtttcca aaacataatc
     1861 cctcatgagc cttgtattag attcgtcagc catctgcaca taacgtaacg aggaaaacaa
     1921 cagtgtcact gaaccatatg atgttaaagt gctacatgtg taacatttaa aggtggataa
     1981 ttgagcgagg tatgttctgt agggtttatg tgcacgagta caacacataa ctatattgat
     2041 aagtacttat caccctacga gtctaacact taaccactta cacaccagtt attaaattat
     2101 taaacatact actaattgtc atctactgtt catgatagca cttttgtaaa taccccgact
     2161 ttgagggtat tttggtaact ttttttttct ttcacttttc ctattttctt tattataacc
     2221 catctatttt tctttctttt ccacttcctt tccaccttca attacatttc acttccactt
     2281 ccttttttaa cctttttact tacttttcca ctttcttttt aaccaaccgc gcaataatct
     2341 atcgttaacc agtaaacgtt aaccaataat ctatcgttga tcatgatagc acttttgtaa
     2401 ataccccgac tttgagggta ttttggtaac tttttttttc tttcactttt cctattttct
     2461 ttattataac ccatctattt ttctttcttt tccacttcct ttccaccttc aattacattt
     2521 cacttccact tcctttttta acctttttac ttacttttcc actttctttt taaccaaccg
     2581 cgcaataatc tatcgttaac cagtaaacgt taactccacg gcaaagcgtg ggtagcttta
     2641 ctagttatat atcatatatc gtgttaatat taattaatat tattaattta atacattata
     2701 ttatatgaca a
//
LOCUS       XM_071886459             789 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperonin-like RBCX protein
            1, chloroplastic (LOC139904542), transcript variant X1, mRNA.
ACCESSION   XM_071886459
VERSION     XM_071886459.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..789
                     /gene="LOC139904542"
                     /note="chaperonin-like RBCX protein 1, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139904542"
     CDS             124..639
                     /gene="LOC139904542"
                     /codon_start=1
                     /product="chaperonin-like RBCX protein 1, chloroplastic
                     isoform X1"
                     /protein_id="XP_071742560.1"
                     /db_xref="GeneID:139904542"
                     /translation="MESSTIPSLSYFSNLYYKPHGTTTSAFPCKQWKLNQRTPHKTLT
                     NCQKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVNAQLESYNTEAHKELTEFLKTHS
                     LNDGDKFCAALMRQSSSLAMRILEVRSAYCKRDFEWDNLERLAKNMADESNTRLMRDY
                     VLETSHVESEK"
     misc_feature    310..615
                     /gene="LOC139904542"
                     /note="RbcX protein; Region: RbcX; pfam02341"
                     /db_xref="CDD:426729"
     polyA_site      789
                     /gene="LOC139904542"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttatggtat gtggggcaaa gatattttgt aaggcttttt gatatccagt gagtgatgat
       61 aaaacagggt acacttaaaa tcttacaaac tagtgatcat tctttttctt catcttattg
      121 acaatggaat cctcaaccat tccttcacta tcttactttt ccaatttata ttacaagccc
      181 catggaacca ccactagtgc ttttccttgc aaacaatgga aattgaacca aagaacacct
      241 cataaaacac ttacaaattg tcaaaagatg tatgtcccag gatttggaga agcatcacca
      301 gaagctaaag cagcaaagaa tctacataat ttctttacat atgttgcagt gagaattgtt
      361 aatgcacagc ttgagagcta caacacagag gctcataagg aactgacgga atttctcaaa
      421 acgcactctt tgaacgacgg cgataagttt tgtgcagcat taatgcgtca atcatcaagc
      481 ctagccatga ggatattaga ggttcgatct gcatactgca agagggattt tgagtgggac
      541 aatttagaac gattagctaa gaatatggct gacgaatcta atacaaggct catgagggat
      601 tatgttttgg aaacaagcca tgtagaaagt gaaaaatgat gttgctcgtg tgatggaaaa
      661 tatactacaa attattatgg tttctattta agtgttacat ccgatcatgt ctatttacat
      721 tatgtgtaat gcaaaccatt ggtatcatta tacactgtaa ttaaataaaa tacaacttat
      781 tgcaaagta
//
LOCUS       XM_071886460             736 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperonin-like RBCX protein
            1, chloroplastic (LOC139904542), transcript variant X2, mRNA.
ACCESSION   XM_071886460
VERSION     XM_071886460.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..736
                     /gene="LOC139904542"
                     /note="chaperonin-like RBCX protein 1, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139904542"
     CDS             134..586
                     /gene="LOC139904542"
                     /codon_start=1
                     /product="chaperonin-like RBCX protein 1, chloroplastic
                     isoform X2"
                     /protein_id="XP_071742561.1"
                     /db_xref="GeneID:139904542"
                     /translation="MESSTIPSLSYFSNLYYKPHGTTTSAFPCKQWKLNQRTPHKTLT
                     NCQKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVNAQLESYNTEAHKELTEFLKTHS
                     LNDGDKFCAALMRQSSSLAMRILEMADESNTRLMRDYVLETSHVESEK"
     misc_feature    320..562
                     /gene="LOC139904542"
                     /note="RbcX protein; Region: RbcX; pfam02341"
                     /db_xref="CDD:426729"
     polyA_site      736
                     /gene="LOC139904542"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aagagatata tttatggtat gtggggcaaa gatattttgt aaggcttttt gatatccagt
       61 gagtgatgat aaaacagggt acacttaaaa tcttacaaac tagtgatcat tctttttctt
      121 catcttattg acaatggaat cctcaaccat tccttcacta tcttactttt ccaatttata
      181 ttacaagccc catggaacca ccactagtgc ttttccttgc aaacaatgga aattgaacca
      241 aagaacacct cataaaacac ttacaaattg tcaaaagatg tatgtcccag gatttggaga
      301 agcatcacca gaagctaaag cagcaaagaa tctacataat ttctttacat atgttgcagt
      361 gagaattgtt aatgcacagc ttgagagcta caacacagag gctcataagg aactgacgga
      421 atttctcaaa acgcactctt tgaacgacgg cgataagttt tgtgcagcat taatgcgtca
      481 atcatcaagc ctagccatga ggatattaga gatggctgac gaatctaata caaggctcat
      541 gagggattat gttttggaaa caagccatgt agaaagtgaa aaatgatgtt gctcgtgtga
      601 tggaaaatat actacaaatt attatggttt ctatttaagt gttacatccg atcatgtcta
      661 tttacattat gtgtaatgca aaccattggt atcattatac actgtaatta aataaaatac
      721 aacttattgc aaagta
//
LOCUS       XM_071886461             486 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides blue copper protein 1b-like
            (LOC139904543), mRNA.
ACCESSION   XM_071886461
VERSION     XM_071886461.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..486
                     /gene="LOC139904543"
                     /note="blue copper protein 1b-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904543"
     CDS             1..486
                     /gene="LOC139904543"
                     /codon_start=1
                     /product="blue copper protein 1b-like"
                     /protein_id="XP_071742562.1"
                     /db_xref="GeneID:139904543"
                     /translation="MAVSCYTIVFIATLTVLVTSISAKEYIVGDANGWSLDYDYQIWA
                     KDKVFFVGDTLVFNYPPGAHNVVKVNATDFQKCTTSSSNGILTSGSDVITLLTPGVKW
                     YICGVGKHCEVKKMKLVITVLPQNLAVAPSPTATSASIKSTVPLIYGFLATLFGSLLL
                     I"
     misc_feature    70..366
                     /gene="LOC139904543"
                     /note="Phytocyanins are plant blue or type I copper
                     proteins; Region: Phytocyanin; cd04216"
                     /db_xref="CDD:259878"
ORIGIN      
        1 atggccgtgt catgttacac catcgtcttc atagcaacac ttactgttct agtgacttca
       61 atttccgcaa aggaatacat tgttggtgac gcaaatggtt ggtctctcga ctacgattat
      121 caaatttggg ccaaggataa agttttcttc gttggagata cacttgtatt caattatcca
      181 cctggtgccc acaatgtggt gaaagtaaat gccactgatt tccaaaaatg taccacttca
      241 tcttccaatg gaatcttgac aagtggaagt gacgtcatca cccttctaac cccgggtgta
      301 aaatggtaca tttgtggtgt tgggaagcac tgtgaggtaa aaaagatgaa gcttgtgatc
      361 acggttctac cacaaaattt ggctgtggct ccaagtccca cagcgacatc agcatctatc
      421 aaatcaacag tacctctgat atatggattt cttgcgacac ttttcggaag tcttctattg
      481 atttag
//
LOCUS       XM_071886462            5510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            UPL5-like (LOC139904544), transcript variant X1, mRNA.
ACCESSION   XM_071886462
VERSION     XM_071886462.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5510
                     /gene="LOC139904544"
                     /note="E3 ubiquitin-protein ligase UPL5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904544"
     CDS             2685..5222
                     /gene="LOC139904544"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase UPL5-like isoform
                     X1"
                     /protein_id="XP_071742563.1"
                     /db_xref="GeneID:139904544"
                     /translation="MSITQSLLNNYIIYRTLQDNVRDPFSNSDLVSIFEAKQHPTPIP
                     TPDHDPITLNFDQITLRNRYDSSNSIQFFVRLMSEGKTLVMHSRPNDKVYSIHAKIQM
                     ITGIPITEQRLIYGRKQLQFEQTLYECMISNDSGLQLVGRMRSCWHPESWQIIDDLIS
                     TICRFCKGEKLGFCSASVKRNLKHFLKLMPTKDVELAKSFLSVLVSFCVPEALVMLYK
                     CTGKTLVVDIVRSFLTDIIYMLPQPIASLCMPVVLKLCLLFRTSDGNYGDVYKLCRFH
                     LVLMVKQFKSFNRSSNKQMLNFGSGLAWKISEDLVLTMEESTSNFGPSKNDIDRFVAF
                     LRMLKVAVKNESMTPISISTLYRLPLKTSRVKYLYVLFDDMLTKMVMCLDTMEDGVKK
                     NKVNGGWSQYLVILNELNDISKLYDGAEKDFWKRLRYNKVSLCYLVVSYAIRGENYEW
                     ILEHKELTNFESRSHLVRLLLPQVLDDVDYDDVYHMLVDRSQLLVDSFEYIAHDEPRH
                     LRVGLNMEFLNEEASGPGVLREWFLLVCREIFNHEISLFIACPNDCRRFFPNPASKVN
                     PMHLEYYNFAGRVIALALMHSIHVGIAFDRSFYLQLAGVNVSLEDIKDAEPYLYSSCK
                     KILDMDPIDVDQDVLGLTFVSDIQEFGSVKVDEFFPGGAHVTVNSRNRKEYVDLLIQH
                     RFTKSVSEQINAFAKGFSNIVGEERIQKIFFKSLYLDDFDKMLYGNESDLCVEDWKAH
                     TVYRIYEETDTQIRWFWKIVGEMTAKQRKALLFFWTSIEYLPANGFSGLVSKLMIHKS
                     DESINRQPSSHTCFYQLCLPAYPSQSIMQSRLNFITQDHVAYSFGSV"
     misc_feature    2895..3107
                     /gene="LOC139904544"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
     misc_feature    4137..5174
                     /gene="LOC139904544"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; Region: HECTc;
                     cd00078"
                     /db_xref="CDD:238033"
     misc_feature    order(4152..4154,4242..4244,4272..4274,4455..4457,
                     5004..5006,5097..5102,5109..5123)
                     /gene="LOC139904544"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     misc_feature    order(4539..4541,4548..4553,4557..4562,4569..4571,
                     4599..4601,4605..4607,4617..4622,4626..4628,4641..4643,
                     4656..4658,4707..4709,4719..4721)
                     /gene="LOC139904544"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
ORIGIN      
        1 acccctactt gcaaagtgct cccggagaaa tcaaaagaag tgatactcca gaaatcgatt
       61 ttttaaaagc aagaaatcga ttttttaagc catcctatca catttgaaca ttatcacatt
      121 taaatatgag atccaaccaa ttgaaccaaa gcagcgtgct tcaattttag tatttaatcg
      181 tatacacaaa ttgaagtcga ttttgagtct aacgaattca gaagacaatt tcctgaacaa
      241 gcatcaaata tcgttcatgg ccacttacgt acatccgcat atgatattac agtgttcaat
      301 tccccagcta acaattcgac ggttcgattt actacagctg ttgatatgtc acaccacaca
      361 ctcctgttat catcaatggt gaaaaattgg acgggtcggt taatggtata cgatgtttgc
      421 ttgacaacta acattgggat aaaatggtat atgacgatgt gcgcttgaca accaacaatg
      481 ggttaaaatt tacgacgaac attgtttacg gattgaagtg atatgttctt gatgatcata
      541 gagccaatga tggttgttca agtcgatgca tatggacaac attatgtttt taaggtttcg
      601 gagagtgttg atgatgctgg atgctaccaa atttgaacag aggatgattg aattgtttga
      661 tatttcaatc atgagggaaa ttgaggtttc actatagagc ttttcaaggc gaagcttgac
      721 aaatggataa attgaaggat tttaacaagt tttcagatct gaaaaggatg aaaaaagggg
      781 tgaaaaggtc ttttcttact ctcttttttt tagcttccaa caaactttat ctatgcggga
      841 tataagttct tctggtataa ctattctcaa acttttgatg aatagttgtt cgagtcaagt
      901 gaaataaagg gaaaaatagt gtatgcttta agtacaagag gtattgtatg actactctag
      961 tatgaagtta cttacgccag actctttcgg caatccaagt ttgtttattg ataaaatttc
     1021 atcacgtcac ttgatctaat tgatttctat tgaggaacta ggttactctt aggttttttt
     1081 tggttggggc ctgatataat cattagggct gcttttgccc atgtcatgaa tgagagtgag
     1141 ttcagtctca tctcatgttt aaatctcgtt agcagcatat ctttggggtg gctagagaaa
     1201 agggttcaaa cggtcaccag atgatctgac ccttcccttt ccctttctta ggtagctttg
     1261 acatagtaaa ccttatatgt ttactcattt agtttatctt ctttatttat atctagggac
     1321 aagggtatgt attataagga gggacaaagg gtatgcatta taaggagtac atagggtacc
     1381 tactctaaag gttaaattat ttatatttat tttcgaaaag gctttcttag acttcgattt
     1441 atgtacactc ttaatccctc aaatgaaaat atcaaatgat tgttgaacct aaaatatgca
     1501 atgtgatacg atacaagtca taccttatat acttatatta tttattagcg aatatgtaat
     1561 ttatttgata gttcttctta aatatattat acaaatttat ttgtataata tattatatcc
     1621 tgtgttttag ggttctctag ttacctttaa tgttaaggtt ttctctagaa acgattcttt
     1681 tacctaggcc tgtaaacgaa ccaaacacac acaaatgtag tttgtacgtg ttcgttcatt
     1741 aaggctttac caaacaaatg accgaaggcg aacatataaa taaatgactt gttcatgttc
     1801 tttcattaat aaaatatgtt agttcattaa cataaatgaa tatgtaagtt aatgaatcac
     1861 ataaatagta atgtacaaag tcaaaatcac aaaaacgtct ctaagatgaa tatcattctc
     1921 aataaaatat gatgtttaaa caattaacat taccataaga taattataaa ctataaacta
     1981 ataaattata aataaagtat ataaaagttt atttagctac agtaaaccta caacaatacc
     2041 caaacctagg aatgtggagt atgaggaggt gagatgaaga caatcattcc tctacactag
     2101 aaatttggaa gtcatttctt cacttcaggc tcttcagcca aaagtagaaa aagtcatcac
     2161 tcagccacct cgaaggcaga gagatcaacc atgagtaata aggtatacca tgaaatgaaa
     2221 tgaaataatc gtaaataagt actccttccg tcccaccaca agtgtccaca ttactatttt
     2281 gggatgtcct atttcaagtg tccactttgt attttatcta tttcaagcga tgagaagtgg
     2341 ttagagagat tagatttatg attggtggag aatgaaaata gtgggattta ccgaaattgt
     2401 atgcaaaaaa taagtggaac ttgtaatggg acggaggtag tatattaaca aaataataat
     2461 ctactcatga atgaagatca accaaaatgg ttgtatttta ctttttgcat ttatctcggt
     2521 atttatttat tcatttttgt tctaacacgt ttaatgcatt gtaactgtaa tgacatgttt
     2581 ttgacggtgc tagtaattat agtatacgca ctaatatata tgcatacaca aatggttttg
     2641 ctccagtgaa tcttatatag tatacaatcg ccggcgaact taccatgtca atcactcaat
     2701 ctctattaaa taattacatt atctaccgga ctttacagga taacgttcgc gatccctttt
     2761 ctaattccga tttagtttcc attttcgaag cgaaacaaca tcctacccct atccctaccc
     2821 ctgatcatga tccaattaca ttaaatttcg atcaaattac gcttcgaaat agatatgatt
     2881 cgtctaattc catacaattc tttgttcgtc tgatgtcgga aggtaaaact ttagttatgc
     2941 acagtagacc taatgataaa gtgtattcta ttcatgcgaa aatacaaatg atcaccggaa
     3001 taccgattac tgaacaacga ttaatatacg gtcgtaagca gctgcagttt gagcaaactt
     3061 tgtatgaatg tatgatttca aatgattctg gattgcagtt agttggtaga atgagaagct
     3121 gttggcatcc tgaatcatgg cagattatag atgacttgat ttcaacaatt tgcaggtttt
     3181 gtaaaggcga aaagttaggt ttttgctctg cttcagttaa aaggaattta aagcatttct
     3241 tgaagctaat gccgacaaaa gacgttgagc ttgctaaatc ttttttgagt gttttggtat
     3301 ccttttgtgt tcctgaagca cttgtgatgc tgtacaagtg tactggtaaa acacttgtag
     3361 tagatattgt tcgaagtttt ttgactgaca tcatatatat gttgccacaa cctatagcat
     3421 ccttgtgcat gcctgttgtg ttgaaattgt gtttattgtt ccgtacatca gatggtaatt
     3481 atggtgatgt ctataagtta tgtaggtttc atctagtttt gatggtgaaa caatttaaga
     3541 gttttaatcg ttctagtaac aaacagatgc ttaattttgg ttccggtctt gcttggaaga
     3601 tttcggaaga tttggtactg actatggagg agtctacaag taattttggg ccttcgaaaa
     3661 atgatattga tcgatttgtg gccttcttgc gcatgttgaa ggttgcagtt aaaaatgagt
     3721 cgatgacacc tatatcgatc tccactctct ataggcttcc tctgaaaacg agtagggtta
     3781 agtatcttta tgtgctattt gatgatatgt tgaccaagat ggttatgtgt cttgatacaa
     3841 tggaggatgg agtgaagaaa aataaagtga atggtggatg gagtcaatat cttgttatat
     3901 tgaatgagtt gaatgatatt tcgaaacttt atgacggtgc agaaaaggat ttttggaaaa
     3961 gattaaggta taacaaggtt tcgttgtgtt atttagttgt tagttatgct attaggggtg
     4021 agaattatga atggattctt gagcataagg agcttacaaa ctttgaatct aggagccatt
     4081 tggtacggtt gttacttcca caagtgttgg atgatgttga ttatgatgat gtgtatcaca
     4141 tgctcgttga tagatcacaa ctgttggtcg attcttttga gtatattgct cacgatgagc
     4201 ctcggcactt gcgtgttgga ttgaatatgg agtttcttaa cgaagaggca agcggcccag
     4261 gtgtactgcg tgaatggttt ttattggtgt gtcgagaaat atttaatcat gaaattagtt
     4321 tatttatcgc ttgcccaaat gactgtagaa gattctttcc gaatccagca tctaaggtga
     4381 accctatgca ccttgaatat tataactttg caggcagggt aattgcctta gccttaatgc
     4441 atagcataca tgttggtatt gcgttcgatc gatcatttta tttgcaattg gcgggtgtaa
     4501 atgtctctct agaagacata aaggatgccg agccatattt atatagtagc tgcaagaaaa
     4561 tattggatat ggatcctatt gatgtggatc aagatgttct tgggttaaca tttgtttcgg
     4621 atatccaaga atttggatcc gtaaaagtcg atgagttttt tccaggtggc gcacatgtga
     4681 ctgtaaatag cagaaacagg aaagagtatg ttgatcttct tattcaacat cgttttacga
     4741 aatccgtttc tgagcagata aacgcttttg caaaaggttt tagtaatatt gttggtgagg
     4801 aacgaattca gaaaatattt tttaaaagtt tgtatcttga cgattttgat aagatgttgt
     4861 atggaaatga aagtgatcta tgcgttgaag attggaaagc gcatacggtt tatagaattt
     4921 atgaagaaac tgatacccag atacgctggt tctggaagat tgttggtgag atgacagcca
     4981 agcagcggaa ggcgcttctt ttcttttgga catcaattga atatttacca gcaaacgggt
     5041 ttagtggttt ggtttcaaag cttatgattc ataagtcgga cgaatccata aatcgtcaac
     5101 cgtcttctca tacatgtttc tatcaacttt gtcttcctgc ttatccttcc caatccatca
     5161 tgcaaagccg cctaaatttc atcactcaag accatgtcgc ctatagcttt ggttctgttt
     5221 aaaatagttc tattatcaat acctgaaatt ttgacatcaa ttgctcatat tagagttagg
     5281 ttgtgccctg cttgtacaaa gagtaaacca ttacagtatc tctgatagtt acagatagag
     5341 aggtctcaga tggtacaaat gtttgtttct tgttttaatt ttggtgtttg ttgtatattc
     5401 atagttatca gatcatataa ttatacaaca atgtaatcaa tcaggttttt attgcttgtt
     5461 tgaacatctt gcttttgtaa tattcagagc tcaaatttga gcacatgcaa
//
LOCUS       XM_071886463            3208 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            UPL5-like (LOC139904544), transcript variant X2, mRNA.
ACCESSION   XM_071886463
VERSION     XM_071886463.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3208
                     /gene="LOC139904544"
                     /note="E3 ubiquitin-protein ligase UPL5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904544"
     CDS             809..2920
                     /gene="LOC139904544"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase UPL5-like isoform
                     X2"
                     /protein_id="XP_071742564.1"
                     /db_xref="GeneID:139904544"
                     /translation="MDKLKDFNKFSDLKRMKKGVKRFCKGEKLGFCSASVKRNLKHFL
                     KLMPTKDVELAKSFLSVLVSFCVPEALVMLYKCTGKTLVVDIVRSFLTDIIYMLPQPI
                     ASLCMPVVLKLCLLFRTSDGNYGDVYKLCRFHLVLMVKQFKSFNRSSNKQMLNFGSGL
                     AWKISEDLVLTMEESTSNFGPSKNDIDRFVAFLRMLKVAVKNESMTPISISTLYRLPL
                     KTSRVKYLYVLFDDMLTKMVMCLDTMEDGVKKNKVNGGWSQYLVILNELNDISKLYDG
                     AEKDFWKRLRYNKVSLCYLVVSYAIRGENYEWILEHKELTNFESRSHLVRLLLPQVLD
                     DVDYDDVYHMLVDRSQLLVDSFEYIAHDEPRHLRVGLNMEFLNEEASGPGVLREWFLL
                     VCREIFNHEISLFIACPNDCRRFFPNPASKVNPMHLEYYNFAGRVIALALMHSIHVGI
                     AFDRSFYLQLAGVNVSLEDIKDAEPYLYSSCKKILDMDPIDVDQDVLGLTFVSDIQEF
                     GSVKVDEFFPGGAHVTVNSRNRKEYVDLLIQHRFTKSVSEQINAFAKGFSNIVGEERI
                     QKIFFKSLYLDDFDKMLYGNESDLCVEDWKAHTVYRIYEETDTQIRWFWKIVGEMTAK
                     QRKALLFFWTSIEYLPANGFSGLVSKLMIHKSDESINRQPSSHTCFYQLCLPAYPSQS
                     IMQSRLNFITQDHVAYSFGSV"
     misc_feature    1835..2872
                     /gene="LOC139904544"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; Region: HECTc;
                     cd00078"
                     /db_xref="CDD:238033"
     misc_feature    order(1850..1852,1940..1942,1970..1972,2153..2155,
                     2702..2704,2795..2800,2807..2821)
                     /gene="LOC139904544"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     misc_feature    order(2237..2239,2246..2251,2255..2260,2267..2269,
                     2297..2299,2303..2305,2315..2320,2324..2326,2339..2341,
                     2354..2356,2405..2407,2417..2419)
                     /gene="LOC139904544"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
ORIGIN      
        1 acccctactt gcaaagtgct cccggagaaa tcaaaagaag tgatactcca gaaatcgatt
       61 ttttaaaagc aagaaatcga ttttttaagc catcctatca catttgaaca ttatcacatt
      121 taaatatgag atccaaccaa ttgaaccaaa gcagcgtgct tcaattttag tatttaatcg
      181 tatacacaaa ttgaagtcga ttttgagtct aacgaattca gaagacaatt tcctgaacaa
      241 gcatcaaata tcgttcatgg ccacttacgt acatccgcat atgatattac agtgttcaat
      301 tccccagcta acaattcgac ggttcgattt actacagctg ttgatatgtc acaccacaca
      361 ctcctgttat catcaatggt gaaaaattgg acgggtcggt taatggtata cgatgtttgc
      421 ttgacaacta acattgggat aaaatggtat atgacgatgt gcgcttgaca accaacaatg
      481 ggttaaaatt tacgacgaac attgtttacg gattgaagtg atatgttctt gatgatcata
      541 gagccaatga tggttgttca agtcgatgca tatggacaac attatgtttt taaggtttcg
      601 gagagtgttg atgatgctgg atgctaccaa atttggtgaa tcaaacattt ttataagtaa
      661 acctgcatat gaaatttgac gtacgaaaag ggaatgaaac cttgccatgc atattttgca
      721 gaacagagga tgattgaatt gtttgatatt tcaatcatga gggaaattga ggtttcacta
      781 tagagctttt caaggcgaag cttgacaaat ggataaattg aaggatttta acaagttttc
      841 agatctgaaa aggatgaaaa aaggggtgaa aaggttttgt aaaggcgaaa agttaggttt
      901 ttgctctgct tcagttaaaa ggaatttaaa gcatttcttg aagctaatgc cgacaaaaga
      961 cgttgagctt gctaaatctt ttttgagtgt tttggtatcc ttttgtgttc ctgaagcact
     1021 tgtgatgctg tacaagtgta ctggtaaaac acttgtagta gatattgttc gaagtttttt
     1081 gactgacatc atatatatgt tgccacaacc tatagcatcc ttgtgcatgc ctgttgtgtt
     1141 gaaattgtgt ttattgttcc gtacatcaga tggtaattat ggtgatgtct ataagttatg
     1201 taggtttcat ctagttttga tggtgaaaca atttaagagt tttaatcgtt ctagtaacaa
     1261 acagatgctt aattttggtt ccggtcttgc ttggaagatt tcggaagatt tggtactgac
     1321 tatggaggag tctacaagta attttgggcc ttcgaaaaat gatattgatc gatttgtggc
     1381 cttcttgcgc atgttgaagg ttgcagttaa aaatgagtcg atgacaccta tatcgatctc
     1441 cactctctat aggcttcctc tgaaaacgag tagggttaag tatctttatg tgctatttga
     1501 tgatatgttg accaagatgg ttatgtgtct tgatacaatg gaggatggag tgaagaaaaa
     1561 taaagtgaat ggtggatgga gtcaatatct tgttatattg aatgagttga atgatatttc
     1621 gaaactttat gacggtgcag aaaaggattt ttggaaaaga ttaaggtata acaaggtttc
     1681 gttgtgttat ttagttgtta gttatgctat taggggtgag aattatgaat ggattcttga
     1741 gcataaggag cttacaaact ttgaatctag gagccatttg gtacggttgt tacttccaca
     1801 agtgttggat gatgttgatt atgatgatgt gtatcacatg ctcgttgata gatcacaact
     1861 gttggtcgat tcttttgagt atattgctca cgatgagcct cggcacttgc gtgttggatt
     1921 gaatatggag tttcttaacg aagaggcaag cggcccaggt gtactgcgtg aatggttttt
     1981 attggtgtgt cgagaaatat ttaatcatga aattagttta tttatcgctt gcccaaatga
     2041 ctgtagaaga ttctttccga atccagcatc taaggtgaac cctatgcacc ttgaatatta
     2101 taactttgca ggcagggtaa ttgccttagc cttaatgcat agcatacatg ttggtattgc
     2161 gttcgatcga tcattttatt tgcaattggc gggtgtaaat gtctctctag aagacataaa
     2221 ggatgccgag ccatatttat atagtagctg caagaaaata ttggatatgg atcctattga
     2281 tgtggatcaa gatgttcttg ggttaacatt tgtttcggat atccaagaat ttggatccgt
     2341 aaaagtcgat gagttttttc caggtggcgc acatgtgact gtaaatagca gaaacaggaa
     2401 agagtatgtt gatcttctta ttcaacatcg ttttacgaaa tccgtttctg agcagataaa
     2461 cgcttttgca aaaggtttta gtaatattgt tggtgaggaa cgaattcaga aaatattttt
     2521 taaaagtttg tatcttgacg attttgataa gatgttgtat ggaaatgaaa gtgatctatg
     2581 cgttgaagat tggaaagcgc atacggttta tagaatttat gaagaaactg atacccagat
     2641 acgctggttc tggaagattg ttggtgagat gacagccaag cagcggaagg cgcttctttt
     2701 cttttggaca tcaattgaat atttaccagc aaacgggttt agtggtttgg tttcaaagct
     2761 tatgattcat aagtcggacg aatccataaa tcgtcaaccg tcttctcata catgtttcta
     2821 tcaactttgt cttcctgctt atccttccca atccatcatg caaagccgcc taaatttcat
     2881 cactcaagac catgtcgcct atagctttgg ttctgtttaa aatagttcta ttatcaatac
     2941 ctgaaatttt gacatcaatt gctcatatta gagttaggtt gtgccctgct tgtacaaaga
     3001 gtaaaccatt acagtatctc tgatagttac agatagagag gtctcagatg gtacaaatgt
     3061 ttgtttcttg ttttaatttt ggtgtttgtt gtatattcat agttatcaga tcatataatt
     3121 atacaacaat gtaatcaatc aggtttttat tgcttgtttg aacatcttgc ttttgtaata
     3181 ttcagagctc aaatttgagc acatgcaa
//
LOCUS       XM_071886465            3222 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            UPL5-like (LOC139904544), transcript variant X3, mRNA.
ACCESSION   XM_071886465
VERSION     XM_071886465.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3222
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3222
                     /gene="LOC139904544"
                     /note="E3 ubiquitin-protein ligase UPL5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904544"
     CDS             823..2934
                     /gene="LOC139904544"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase UPL5-like isoform
                     X2"
                     /protein_id="XP_071742566.1"
                     /db_xref="GeneID:139904544"
                     /translation="MDKLKDFNKFSDLKRMKKGVKRFCKGEKLGFCSASVKRNLKHFL
                     KLMPTKDVELAKSFLSVLVSFCVPEALVMLYKCTGKTLVVDIVRSFLTDIIYMLPQPI
                     ASLCMPVVLKLCLLFRTSDGNYGDVYKLCRFHLVLMVKQFKSFNRSSNKQMLNFGSGL
                     AWKISEDLVLTMEESTSNFGPSKNDIDRFVAFLRMLKVAVKNESMTPISISTLYRLPL
                     KTSRVKYLYVLFDDMLTKMVMCLDTMEDGVKKNKVNGGWSQYLVILNELNDISKLYDG
                     AEKDFWKRLRYNKVSLCYLVVSYAIRGENYEWILEHKELTNFESRSHLVRLLLPQVLD
                     DVDYDDVYHMLVDRSQLLVDSFEYIAHDEPRHLRVGLNMEFLNEEASGPGVLREWFLL
                     VCREIFNHEISLFIACPNDCRRFFPNPASKVNPMHLEYYNFAGRVIALALMHSIHVGI
                     AFDRSFYLQLAGVNVSLEDIKDAEPYLYSSCKKILDMDPIDVDQDVLGLTFVSDIQEF
                     GSVKVDEFFPGGAHVTVNSRNRKEYVDLLIQHRFTKSVSEQINAFAKGFSNIVGEERI
                     QKIFFKSLYLDDFDKMLYGNESDLCVEDWKAHTVYRIYEETDTQIRWFWKIVGEMTAK
                     QRKALLFFWTSIEYLPANGFSGLVSKLMIHKSDESINRQPSSHTCFYQLCLPAYPSQS
                     IMQSRLNFITQDHVAYSFGSV"
     misc_feature    1849..2886
                     /gene="LOC139904544"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; Region: HECTc;
                     cd00078"
                     /db_xref="CDD:238033"
     misc_feature    order(1864..1866,1954..1956,1984..1986,2167..2169,
                     2716..2718,2809..2814,2821..2835)
                     /gene="LOC139904544"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     misc_feature    order(2251..2253,2260..2265,2269..2274,2281..2283,
                     2311..2313,2317..2319,2329..2334,2338..2340,2353..2355,
                     2368..2370,2419..2421,2431..2433)
                     /gene="LOC139904544"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
ORIGIN      
        1 acccctactt gcaaagtgct cccggagaaa tcaaaagaag tgatactcca gaaatcgatt
       61 ttttaaaagc aagaaatcga ttttttaagc catcctatca catttgaaca ttatcacatt
      121 taaatatgag atccaaccaa ttgaaccaaa gcagcgtgct tcaattttag tatttaatcg
      181 tatacacaaa ttgaagtcga ttttgagtct aacgaattca gaagacaatt tcctgaacaa
      241 gcatcaaata tcgttcatgg ccacttacgt acatccgcat atgatattac agtgttcaat
      301 tccccagcta acaattcgac ggttcgattt actacagctg ttgatatgtc acaccacaca
      361 ctcctgttat catcaatggt gaaaaattgg acgggtcggt taatggtata cgatgtttgc
      421 ttgacaacta acattgggat aaaatggtat atgacgatgt gcgcttgaca accaacaatg
      481 ggttaaaatt tacgacgaac attgtttacg gattgaagtg atatgttctt gatgatcata
      541 gagccaatga tggttgttca agtcgatgca tatggacaac attatgtttt taaggtttcg
      601 gagagtgttg atgatgctgg atgctaccaa atttggtgaa tcaaacattt ttataagtaa
      661 acctgcatat gaaatttgac gtacgaaaag ggaatgaaac cttgccatgc atattttgca
      721 gaacagagga tgattgaatt gtttgatatt tcaatcatga gggaaattga ggtttcacta
      781 tagagctttt caaggtactg ttgtggaagc gaagcttgac aaatggataa attgaaggat
      841 tttaacaagt tttcagatct gaaaaggatg aaaaaagggg tgaaaaggtt ttgtaaaggc
      901 gaaaagttag gtttttgctc tgcttcagtt aaaaggaatt taaagcattt cttgaagcta
      961 atgccgacaa aagacgttga gcttgctaaa tcttttttga gtgttttggt atccttttgt
     1021 gttcctgaag cacttgtgat gctgtacaag tgtactggta aaacacttgt agtagatatt
     1081 gttcgaagtt ttttgactga catcatatat atgttgccac aacctatagc atccttgtgc
     1141 atgcctgttg tgttgaaatt gtgtttattg ttccgtacat cagatggtaa ttatggtgat
     1201 gtctataagt tatgtaggtt tcatctagtt ttgatggtga aacaatttaa gagttttaat
     1261 cgttctagta acaaacagat gcttaatttt ggttccggtc ttgcttggaa gatttcggaa
     1321 gatttggtac tgactatgga ggagtctaca agtaattttg ggccttcgaa aaatgatatt
     1381 gatcgatttg tggccttctt gcgcatgttg aaggttgcag ttaaaaatga gtcgatgaca
     1441 cctatatcga tctccactct ctataggctt cctctgaaaa cgagtagggt taagtatctt
     1501 tatgtgctat ttgatgatat gttgaccaag atggttatgt gtcttgatac aatggaggat
     1561 ggagtgaaga aaaataaagt gaatggtgga tggagtcaat atcttgttat attgaatgag
     1621 ttgaatgata tttcgaaact ttatgacggt gcagaaaagg atttttggaa aagattaagg
     1681 tataacaagg tttcgttgtg ttatttagtt gttagttatg ctattagggg tgagaattat
     1741 gaatggattc ttgagcataa ggagcttaca aactttgaat ctaggagcca tttggtacgg
     1801 ttgttacttc cacaagtgtt ggatgatgtt gattatgatg atgtgtatca catgctcgtt
     1861 gatagatcac aactgttggt cgattctttt gagtatattg ctcacgatga gcctcggcac
     1921 ttgcgtgttg gattgaatat ggagtttctt aacgaagagg caagcggccc aggtgtactg
     1981 cgtgaatggt ttttattggt gtgtcgagaa atatttaatc atgaaattag tttatttatc
     2041 gcttgcccaa atgactgtag aagattcttt ccgaatccag catctaaggt gaaccctatg
     2101 caccttgaat attataactt tgcaggcagg gtaattgcct tagccttaat gcatagcata
     2161 catgttggta ttgcgttcga tcgatcattt tatttgcaat tggcgggtgt aaatgtctct
     2221 ctagaagaca taaaggatgc cgagccatat ttatatagta gctgcaagaa aatattggat
     2281 atggatccta ttgatgtgga tcaagatgtt cttgggttaa catttgtttc ggatatccaa
     2341 gaatttggat ccgtaaaagt cgatgagttt tttccaggtg gcgcacatgt gactgtaaat
     2401 agcagaaaca ggaaagagta tgttgatctt cttattcaac atcgttttac gaaatccgtt
     2461 tctgagcaga taaacgcttt tgcaaaaggt tttagtaata ttgttggtga ggaacgaatt
     2521 cagaaaatat tttttaaaag tttgtatctt gacgattttg ataagatgtt gtatggaaat
     2581 gaaagtgatc tatgcgttga agattggaaa gcgcatacgg tttatagaat ttatgaagaa
     2641 actgataccc agatacgctg gttctggaag attgttggtg agatgacagc caagcagcgg
     2701 aaggcgcttc ttttcttttg gacatcaatt gaatatttac cagcaaacgg gtttagtggt
     2761 ttggtttcaa agcttatgat tcataagtcg gacgaatcca taaatcgtca accgtcttct
     2821 catacatgtt tctatcaact ttgtcttcct gcttatcctt cccaatccat catgcaaagc
     2881 cgcctaaatt tcatcactca agaccatgtc gcctatagct ttggttctgt ttaaaatagt
     2941 tctattatca atacctgaaa ttttgacatc aattgctcat attagagtta ggttgtgccc
     3001 tgcttgtaca aagagtaaac cattacagta tctctgatag ttacagatag agaggtctca
     3061 gatggtacaa atgtttgttt cttgttttaa ttttggtgtt tgttgtatat tcatagttat
     3121 cagatcatat aattatacaa caatgtaatc aatcaggttt ttattgcttg tttgaacatc
     3181 ttgcttttgt aatattcaga gctcaaattt gagcacatgc aa
//
LOCUS       XM_071886466            3122 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            UPL5-like (LOC139904544), transcript variant X4, mRNA.
ACCESSION   XM_071886466
VERSION     XM_071886466.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3122
                     /gene="LOC139904544"
                     /note="E3 ubiquitin-protein ligase UPL5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904544"
     CDS             723..2834
                     /gene="LOC139904544"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase UPL5-like isoform
                     X2"
                     /protein_id="XP_071742567.1"
                     /db_xref="GeneID:139904544"
                     /translation="MDKLKDFNKFSDLKRMKKGVKRFCKGEKLGFCSASVKRNLKHFL
                     KLMPTKDVELAKSFLSVLVSFCVPEALVMLYKCTGKTLVVDIVRSFLTDIIYMLPQPI
                     ASLCMPVVLKLCLLFRTSDGNYGDVYKLCRFHLVLMVKQFKSFNRSSNKQMLNFGSGL
                     AWKISEDLVLTMEESTSNFGPSKNDIDRFVAFLRMLKVAVKNESMTPISISTLYRLPL
                     KTSRVKYLYVLFDDMLTKMVMCLDTMEDGVKKNKVNGGWSQYLVILNELNDISKLYDG
                     AEKDFWKRLRYNKVSLCYLVVSYAIRGENYEWILEHKELTNFESRSHLVRLLLPQVLD
                     DVDYDDVYHMLVDRSQLLVDSFEYIAHDEPRHLRVGLNMEFLNEEASGPGVLREWFLL
                     VCREIFNHEISLFIACPNDCRRFFPNPASKVNPMHLEYYNFAGRVIALALMHSIHVGI
                     AFDRSFYLQLAGVNVSLEDIKDAEPYLYSSCKKILDMDPIDVDQDVLGLTFVSDIQEF
                     GSVKVDEFFPGGAHVTVNSRNRKEYVDLLIQHRFTKSVSEQINAFAKGFSNIVGEERI
                     QKIFFKSLYLDDFDKMLYGNESDLCVEDWKAHTVYRIYEETDTQIRWFWKIVGEMTAK
                     QRKALLFFWTSIEYLPANGFSGLVSKLMIHKSDESINRQPSSHTCFYQLCLPAYPSQS
                     IMQSRLNFITQDHVAYSFGSV"
     misc_feature    1749..2786
                     /gene="LOC139904544"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; Region: HECTc;
                     cd00078"
                     /db_xref="CDD:238033"
     misc_feature    order(1764..1766,1854..1856,1884..1886,2067..2069,
                     2616..2618,2709..2714,2721..2735)
                     /gene="LOC139904544"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     misc_feature    order(2151..2153,2160..2165,2169..2174,2181..2183,
                     2211..2213,2217..2219,2229..2234,2238..2240,2253..2255,
                     2268..2270,2319..2321,2331..2333)
                     /gene="LOC139904544"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
ORIGIN      
        1 acccctactt gcaaagtgct cccggagaaa tcaaaagaag tgatactcca gaaatcgatt
       61 ttttaaaagc aagaaatcga ttttttaagc catcctatca catttgaaca ttatcacatt
      121 taaatatgag atccaaccaa ttgaaccaaa gcagcgtgct tcaattttag tatttaatcg
      181 tatacacaaa ttgaagtcga ttttgagtct aacgaattca gaagacaatt tcctgaacaa
      241 gcatcaaata tcgttcatgg ccacttacgt acatccgcat atgatattac agtgttcaat
      301 tccccagcta acaattcgac ggttcgattt actacagctg ttgatatgtc acaccacaca
      361 ctcctgttat catcaatggt gaaaaattgg acgggtcggt taatggtata cgatgtttgc
      421 ttgacaacta acattgggat aaaatggtat atgacgatgt gcgcttgaca accaacaatg
      481 ggttaaaatt tacgacgaac attgtttacg gattgaagtg atatgttctt gatgatcata
      541 gagccaatga tggttgttca agtcgatgca tatggacaac attatgtttt taaggtttcg
      601 gagagtgttg atgatgctgg atgctaccaa atttgaacag aggatgattg aattgtttga
      661 tatttcaatc atgagggaaa ttgaggtttc actatagagc ttttcaaggc gaagcttgac
      721 aaatggataa attgaaggat tttaacaagt tttcagatct gaaaaggatg aaaaaagggg
      781 tgaaaaggtt ttgtaaaggc gaaaagttag gtttttgctc tgcttcagtt aaaaggaatt
      841 taaagcattt cttgaagcta atgccgacaa aagacgttga gcttgctaaa tcttttttga
      901 gtgttttggt atccttttgt gttcctgaag cacttgtgat gctgtacaag tgtactggta
      961 aaacacttgt agtagatatt gttcgaagtt ttttgactga catcatatat atgttgccac
     1021 aacctatagc atccttgtgc atgcctgttg tgttgaaatt gtgtttattg ttccgtacat
     1081 cagatggtaa ttatggtgat gtctataagt tatgtaggtt tcatctagtt ttgatggtga
     1141 aacaatttaa gagttttaat cgttctagta acaaacagat gcttaatttt ggttccggtc
     1201 ttgcttggaa gatttcggaa gatttggtac tgactatgga ggagtctaca agtaattttg
     1261 ggccttcgaa aaatgatatt gatcgatttg tggccttctt gcgcatgttg aaggttgcag
     1321 ttaaaaatga gtcgatgaca cctatatcga tctccactct ctataggctt cctctgaaaa
     1381 cgagtagggt taagtatctt tatgtgctat ttgatgatat gttgaccaag atggttatgt
     1441 gtcttgatac aatggaggat ggagtgaaga aaaataaagt gaatggtgga tggagtcaat
     1501 atcttgttat attgaatgag ttgaatgata tttcgaaact ttatgacggt gcagaaaagg
     1561 atttttggaa aagattaagg tataacaagg tttcgttgtg ttatttagtt gttagttatg
     1621 ctattagggg tgagaattat gaatggattc ttgagcataa ggagcttaca aactttgaat
     1681 ctaggagcca tttggtacgg ttgttacttc cacaagtgtt ggatgatgtt gattatgatg
     1741 atgtgtatca catgctcgtt gatagatcac aactgttggt cgattctttt gagtatattg
     1801 ctcacgatga gcctcggcac ttgcgtgttg gattgaatat ggagtttctt aacgaagagg
     1861 caagcggccc aggtgtactg cgtgaatggt ttttattggt gtgtcgagaa atatttaatc
     1921 atgaaattag tttatttatc gcttgcccaa atgactgtag aagattcttt ccgaatccag
     1981 catctaaggt gaaccctatg caccttgaat attataactt tgcaggcagg gtaattgcct
     2041 tagccttaat gcatagcata catgttggta ttgcgttcga tcgatcattt tatttgcaat
     2101 tggcgggtgt aaatgtctct ctagaagaca taaaggatgc cgagccatat ttatatagta
     2161 gctgcaagaa aatattggat atggatccta ttgatgtgga tcaagatgtt cttgggttaa
     2221 catttgtttc ggatatccaa gaatttggat ccgtaaaagt cgatgagttt tttccaggtg
     2281 gcgcacatgt gactgtaaat agcagaaaca ggaaagagta tgttgatctt cttattcaac
     2341 atcgttttac gaaatccgtt tctgagcaga taaacgcttt tgcaaaaggt tttagtaata
     2401 ttgttggtga ggaacgaatt cagaaaatat tttttaaaag tttgtatctt gacgattttg
     2461 ataagatgtt gtatggaaat gaaagtgatc tatgcgttga agattggaaa gcgcatacgg
     2521 tttatagaat ttatgaagaa actgataccc agatacgctg gttctggaag attgttggtg
     2581 agatgacagc caagcagcgg aaggcgcttc ttttcttttg gacatcaatt gaatatttac
     2641 cagcaaacgg gtttagtggt ttggtttcaa agcttatgat tcataagtcg gacgaatcca
     2701 taaatcgtca accgtcttct catacatgtt tctatcaact ttgtcttcct gcttatcctt
     2761 cccaatccat catgcaaagc cgcctaaatt tcatcactca agaccatgtc gcctatagct
     2821 ttggttctgt ttaaaatagt tctattatca atacctgaaa ttttgacatc aattgctcat
     2881 attagagtta ggttgtgccc tgcttgtaca aagagtaaac cattacagta tctctgatag
     2941 ttacagatag agaggtctca gatggtacaa atgtttgttt cttgttttaa ttttggtgtt
     3001 tgttgtatat tcatagttat cagatcatat aattatacaa caatgtaatc aatcaggttt
     3061 ttattgcttg tttgaacatc ttgcttttgt aatattcaga gctcaaattt gagcacatgc
     3121 aa
//
LOCUS       XM_071886467            1020 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides flavonol
            sulfotransferase-like (LOC139904545), mRNA.
ACCESSION   XM_071886467
VERSION     XM_071886467.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1020
                     /gene="LOC139904545"
                     /note="flavonol sulfotransferase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904545"
     CDS             39..1019
                     /gene="LOC139904545"
                     /codon_start=1
                     /product="flavonol sulfotransferase-like"
                     /protein_id="XP_071742568.1"
                     /db_xref="GeneID:139904545"
                     /translation="MSFIIDKFKNKVSTLPKHKSWLINHDIYKYEGFWYHQGFWFHSS
                     ASFSIEITMALQEEFQAQPTNILLASHPKSGTTWLKALAFAIANRTTLKNDTNSTLIH
                     PLRTTIPHGCVPYIESESFFNNPCYSNELISTHLPYTSLPKSIITSNCRIVYICRNPK
                     DVFVSFWHFVNKTKGDNSPPLDLEASFESFRSGASPMGPCWDHVIGYRKASLERPDKV
                     LFLIYEDLKKDPKEEVKKLAKFMGYPFNEDEEGDKEIEEIIRLCSFEQLRKVSKENRP
                     GAGATPKVIPDDAFFRKGEAGDSVNHLTMEMIQILDKITFEKYDSLDISF"
     misc_feature    57..995
                     /gene="LOC139904545"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_1;
                     cl21551"
                     /db_xref="CDD:473908"
ORIGIN      
        1 caaccattca agaaaaggaa atctcttgtc aaacaaaaat gtcgttcatt atagacaaat
       61 tcaagaacaa agtctcaact cttcctaaac acaaaagttg gttaattaac catgatatat
      121 acaagtatga gggcttttgg tatcaccaag gtttttggtt tcactctagt gctagtttct
      181 caatcgaaat aactatggca ctgcaagagg aatttcaagc acaacccaca aacattttac
      241 tagcaagtca tccaaaatca ggcacaactt ggcttaaggc tcttgccttt gccattgcga
      301 atcgaaccac gttaaaaaat gacaccaatt caaccctaat ccacccattg cgcacaacta
      361 ttcctcatgg atgtgtccct tatatcgaga gcgaatcctt ttttaacaac ccatgttact
      421 ccaacgaact catatccacg caccttcctt acacatcatt gcctaaatcc atcattactt
      481 ctaattgtcg tattgtttat atatgtagaa accctaaaga tgtgtttgtt tccttttggc
      541 atttcgtgaa caaaacgaaa ggcgataact cgcctccatt agacttggag gcttcatttg
      601 agtcgtttag gagtggtgct agcccaatgg gaccttgttg ggatcacgtg atagggtacc
      661 gtaaggcgag tcttgaacga ccagataaag tattgttctt gatctatgaa gatctgaaaa
      721 aggatccaaa ggaggaggtt aagaaactgg ctaagttcat gggttaccct tttaacgaag
      781 acgaggaggg tgacaaggag atcgaagaaa taataagact atgcagtttc gagcaattac
      841 gcaaggttag taaggaaaat aggcccggag ctggtgcaac acctaaggtc atacctgatg
      901 atgccttctt tcgaaagggc gaagcggggg attcagtaaa ccatcttacc atggaaatga
      961 tccaaatttt ggacaaaatc acctttgaaa aatatgatag tttagacatt tcattttgag
//
LOCUS       XR_011778860             413 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904546), ncRNA.
ACCESSION   XR_011778860
VERSION     XR_011778860.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..413
                     /gene="LOC139904546"
                     /note="uncharacterized LOC139904546; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904546"
     ncRNA           1..413
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904546"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904546"
ORIGIN      
        1 agtgaccttt tacaaaagaa caatgtaatt gcttggatcg agttctgtat cacaatatgt
       61 ccaaagcttc gttctcctct attccctatg ttgctgtaga aacatcatca gggtcgtcca
      121 ctataggagc actaccattt ggatactggc aagtcgccct agccacatgt ggggtttcct
      181 gctacgtttc aaacaggcgg tgcatccatc gggtttaagt gtggttgcat accgtccatt
      241 gttacgtgaa ttctctgctc atgtacaacc tgaaggagca aatatctttt ataaggggtt
      301 tgattggaac aaaagtctta ctatttacca aaacttcgtg cttagaatga catgaaaaat
      361 caaaacttga ttctggtagc aagacaagaa gccgttgatt gaatttcaaa ggt
//
LOCUS       XM_071886468             842 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA polymerase I A,
            chloroplastic/mitochondrial-like (LOC139904547), mRNA.
ACCESSION   XM_071886468
VERSION     XM_071886468.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..842
                     /gene="LOC139904547"
                     /note="DNA polymerase I A,
                     chloroplastic/mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904547"
     CDS             75..719
                     /gene="LOC139904547"
                     /codon_start=1
                     /product="DNA polymerase I A,
                     chloroplastic/mitochondrial-like"
                     /protein_id="XP_071742569.1"
                     /db_xref="GeneID:139904547"
                     /translation="MHMARLWDSSRRMSGGYSLEALTSDSKGIMSGANLGPNKELIGK
                     VSMKNIFGRKKLKKDGTEGKVVVIPPVEELQRVEKITWICYSALDSISTLKLYERLQC
                     KLWNREWKFNGVTKGTLFDFYEQYWCPFGELLVKMETEGVLVDRPYLNEIEKVAKFEQ
                     QRAADRFRNWASKLCPDAKFMNVGSDTQLRQLFFGGTYNRAAIFLGKMGVFIVH"
     misc_feature    <75..482
                     /gene="LOC139904547"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; Region: DnaQ_like_exo; cl10012"
                     /db_xref="CDD:447876"
     misc_feature    <327..>659
                     /gene="LOC139904547"
                     /note="DNA polymerase I, 3'-5' exonuclease and polymerase
                     domains [Replication, recombination and repair]; Region:
                     PolA; COG0749"
                     /db_xref="CDD:440512"
ORIGIN      
        1 ggcacaacta tagctttgat agccatgttc tagagaatta cgggattaaa cttgctggtt
       61 ttcatgctga tacaatgcac atggctcgat tatgggattc ttcaagacga atgtcgggtg
      121 gatattcatt agaagcactt actagtgatt caaaaggaat aatgtcgggt gctaatttag
      181 gccctaacaa agagttaatt ggaaaagttt caatgaaaaa cattttcggt agaaaaaagc
      241 taaaaaaaga cggtaccgaa ggcaaagttg ttgttattcc ccccgttgaa gaacttcaaa
      301 gggtagaaaa gataacatgg atttgttatt cggctttaga ttcaattagc actcttaagc
      361 tttatgaaag attacaatgt aaattatgga atagggagtg gaaatttaat ggtgttacaa
      421 agggaacatt gtttgacttt tatgaacaat attggtgtcc ttttggtgag ttattggtga
      481 aaatggaaac cgaaggggtg ttagttgatc gaccttatct taatgagatt gaaaaagtgg
      541 ctaaatttga acaacaacga gctgctgatc ggtttcgtaa ttgggcatcg aagctttgtc
      601 ccgatgctaa gtttatgaac gttgggagtg atacacagtt gcgccaactc tttttcggtg
      661 gcacttataa tagggcagcc atatttctgg gaaaaatggg cgtattcatt gttcactaaa
      721 tatcaacaca gaaacagggc gcctatcaga atcaacctgg tttagagaag gatcgataca
      781 agattcgtca ggcatttata acagcacctg gaaacactct tattgttgct gattacgggc
      841 ag
//
LOCUS       XM_071886469            1017 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA polymerase I B,
            chloroplastic/mitochondrial-like (LOC139904548), mRNA.
ACCESSION   XM_071886469
VERSION     XM_071886469.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1017
                     /gene="LOC139904548"
                     /note="DNA polymerase I B,
                     chloroplastic/mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904548"
     CDS             194..748
                     /gene="LOC139904548"
                     /codon_start=1
                     /product="DNA polymerase I B,
                     chloroplastic/mitochondrial-like"
                     /protein_id="XP_071742570.1"
                     /db_xref="GeneID:139904548"
                     /translation="MFASERRKAKMLNFSIAYGKTAVGLARDWKVSVREARETVARWY
                     GGREEVLRWQKDRKKEARRSGCVHTLLGRARTFPSTTNATQSHKNHIDRAAINTPVQG
                     SAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGPTESAEVAKAVVVECMSKPF
                     DGKNILKVGLSVDAKFAKNWYSAK"
     misc_feature    <197..736
                     /gene="LOC139904548"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     Region: DNA_pol_A; cl02626"
                     /db_xref="CDD:470638"
ORIGIN      
        1 acttcgaatt cttgcacatc ttgctgattg taagagcatg ttggaagctt ttaaagctgg
       61 tggagatttt cattcaagaa ctgcaatgaa catgtatcct tacattcgtg atgcgattga
      121 ccgtaaagac gttcttcttg agtgacatcc tcaatccggt caagaaagtc cacccgttcc
      181 tctccttaag gatatgtttg cttctgaaag aagaaaagca aagatgctta atttttctat
      241 tgcatatggg aaaaccgccg ttgggcttgc acgcgattgg aaggtatctg taagggaagc
      301 aagagaaaca gtggctcgat ggtatggggg tagggaagaa gtgctgaggt ggcaaaaaga
      361 ccgtaaaaag gaagctcgaa gaagcggatg cgtacataca ttgttaggac gtgcacgaac
      421 ttttccgtct acaacaaatg ccactcaatc tcataaaaat catattgatc gagctgccat
      481 taatacaccc gttcagggta gtgctgctga tgtggctatg tgtgccatgt tggaaatatc
      541 taaaaatgct cggctgaaag aacttggatg gaagctgctt ttacaggttc atgatgaagt
      601 aatattagaa gggccaaccg agtcagcaga ggttgcaaaa gcagtagttg tcgagtgcat
      661 gtcaaaacca tttgatggaa agaatattct taaagttgga ctttcggttg atgctaaatt
      721 tgccaaaaat tggtactctg ccaagtaaaa gccaactgac tcgcgtgggt ccctcaatca
      781 atgccacatt cgattcccct cgaacgtgac gagtgtcttg taatgatgac aattgattga
      841 ttgattggtc attgtaggtt ttaagagttt gttggagctt gattgggcga ttttagctcc
      901 ttgtagagta gagtagttgt gattttgcaa agattcgatt ccatgtgttg tatatagttt
      961 ttggaattta tgtgacacga tgcaactggc ttgcaaattg taaaaaatga tatattg
//
LOCUS       XM_071886470             646 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904549), mRNA.
ACCESSION   XM_071886470
VERSION     XM_071886470.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..646
                     /gene="LOC139904549"
                     /note="uncharacterized LOC139904549; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904549"
     CDS             7..471
                     /gene="LOC139904549"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742571.1"
                     /db_xref="GeneID:139904549"
                     /translation="MATIKYVFIFLTLSTLHGSYHARPLHDISIHEIFNRLSTFQAAN
                     VIQMVTGLGKPPRPPGAPPQGQTTLNQNSVVTSIDELTESLSLEAKPKPAPPQGQTTY
                     GVDNTKSNRDTEEEQDLLVTKLTTSMDKMTNNYDDKIVYQVKITGTTTISSY"
ORIGIN      
        1 gataccatgg caaccatcaa atatgttttc attttcttaa ctctctctac tttacatgga
       61 tcttatcatg ctcgaccttt acatgacata tctatccatg aaatctttaa tcgactatca
      121 acgtttcagg cggcaaacgt tattcaaatg gttaccggcc ttggaaaacc gccacgacca
      181 ccaggagcac caccacaagg ccaaacgacc ctaaatcaaa atagcgtggt cacatctata
      241 gatgagctaa cagagtctct gtccttggaa gcaaaaccaa aaccagcacc acctcaaggt
      301 cagacgactt atggcgtaga taatacaaag tctaataggg atacagaaga agaacaagat
      361 cttctggtta cgaaactgac tacttcaatg gacaagatga caaataatta tgacgataaa
      421 atagtatatc aagtgaagat cactggcact acgactattt catcatacta agcttgtttc
      481 gatcataatt acgtcattag agtggttaac taacttttgg ggttggcaaa gttgaacttc
      541 ctctagctta aaaaatgtag ttactgggaa aaatattatt atacgtagta ttattttgta
      601 acataaataa tgtacgttta ataaagaatg ttgctaattt gctaca
//
LOCUS       XR_011778861             422 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904550), transcript variant X1, ncRNA.
ACCESSION   XR_011778861
VERSION     XR_011778861.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..422
                     /gene="LOC139904550"
                     /note="uncharacterized LOC139904550; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904550"
     ncRNA           1..422
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904550"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904550"
ORIGIN      
        1 actatatatt ttttctcgat ttttcatgtg tatacctggt ggcagtgatg gttctggcaa
       61 agaaggtgat gatggaaaat tgtagagctg tagatataac ataaattatg actatgaatt
      121 agaagataaa gaagttggtt tggatacatc atcattcatc cataagatat acccaatgtc
      181 atgtgtttgc tgctttgggt aagtggtgtg gacagtggaa aaaatgattt cttgatctat
      241 gttacccgga ggtgggaaaa tgggctggct ttactacatg tgtctaaata ggtaataata
      301 ttggtagcta tttattttta acgtgtttta gttgtttgta tcctatttgt actatgattt
      361 attgaattgt gtagttgtag ctgctaatcc tgtagcaaca cagacagtgt gtgctttgca
      421 gc
//
LOCUS       XR_011778862             345 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904550), transcript variant X2, ncRNA.
ACCESSION   XR_011778862
VERSION     XR_011778862.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..345
                     /gene="LOC139904550"
                     /note="uncharacterized LOC139904550; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904550"
     ncRNA           1..345
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904550"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904550"
ORIGIN      
        1 actatatatt ttttctcgat ttttcatgtg tatacctggt ggcagtgatg gttctggcaa
       61 agaaggtgat gatggaaaat tgtagagctg tagatataac ataaattatg actatgaatt
      121 agaagataaa gaagttggtt tggatacatc atcattcatc cataagatat acccaatgtc
      181 atgtgtttgc tgctttgggt aagtggtgtg gacagtggaa aaaatgattt cttgatctat
      241 gttacccgga ggtgggaaaa tgggctggct ttactacatg tgtctaaata ggatcgttta
      301 tattacaaca tattaaccca caaaatagta tagcaacgac aggag
//
LOCUS       XM_071886471             715 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904552), mRNA.
ACCESSION   XM_071886471
VERSION     XM_071886471.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..715
                     /gene="LOC139904552"
                     /note="uncharacterized LOC139904552; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904552"
     CDS             275..667
                     /gene="LOC139904552"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742572.1"
                     /db_xref="GeneID:139904552"
                     /translation="MKKGEFGEGRIVKAKEKIVSDDFQEKGKQKQINLKTPNNAEDYL
                     KCLELRYRRIVEETNENNSVLTKATKMYPNNKDIDEFERKFTSLFKQESEAKKREEPA
                     TKEDSKQKQQTTATTSLQISNNGEKNLL"
ORIGIN      
        1 atgtggaaca tgtaatttga agttcttgcc atgtattaca aatgaggtag atgtatcgaa
       61 ggttgattgg tgtggataca tatatgaatg tctattacag agcaagaagg gatgggacag
      121 aggacaaaat ggatagtatt attctggacc gttaagtgtg ctaattctgt tgtatctaga
      181 aagagtagaa tgtgaaggtt tcttgaaaaa taaaaatatc tatgtgatcg agcgatggac
      241 agcagaagaa ataaaaagaa ggattgatgt agaaatgaag aaaggggaat ttggtgaagg
      301 aagaattgtg aaggcaaaag aaaaaattgt tagtgatgat tttcaagaaa aagggaaaca
      361 aaaacaaata aacctcaaaa caccaaacaa tgcagaggac tatcttaagt gtttagaatt
      421 gaggtatcgg cgcatagttg aagaaacaaa tgaaaataac agtgtgttaa caaaagcaac
      481 aaagatgtat ccaaacaata aggatataga tgaatttgaa agaaaattta caagtttgtt
      541 caagcaagaa tctgaggcaa aaaaaagaga agaacctgca acaaaagaag attctaaaca
      601 aaaacagcaa acaactgcaa ctacttcact acaaatcagc aataatggcg aaaaaaatct
      661 gctttgaaac ctagaaatct gtatgctgag atgaatcaaa acccaagagc tgaat
//
LOCUS       XM_071886472            1803 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycerol kinase
            (LOC139904553), mRNA.
ACCESSION   XM_071886472
VERSION     XM_071886472.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1803
                     /gene="LOC139904553"
                     /note="glycerol kinase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139904553"
     CDS             73..1641
                     /gene="LOC139904553"
                     /codon_start=1
                     /product="glycerol kinase"
                     /protein_id="XP_071742573.1"
                     /db_xref="GeneID:139904553"
                     /translation="MAKEEAFIGSIDQGTTSTRFIIYDQNAKSIGSHQVEFTQFCPQA
                     GWVEHDPIEILESVKMCISKAIDKATADGYNVDNGLKAIGITNQRETTVVWSKSTGVA
                     LYNAIVWMDSRTTSICRRLEKELSGGRTHFLHSCGLPISTYFSALKLLWLLENVEPVK
                     EAVKKGDALFGTIDSWLIWNLTGGVNNGLHVTDVSNASRTMLMNLKTLAWDESTLETL
                     KIPKNILPKIVSNAEVIGHVAKGWVIPGVPISGCLGDQHAAMLGQSCKKGEAKSTYGT
                     GAFILLNTGEDVIESKHGLLTTLSFKLGKNAPTNYALEGSIAIAGAAVQWLRDSLGII
                     KSASEIEELASKVDSSGGVYFVPAFNGLFAPWWRDDARGVLIGITRFTNKSHIARAVL
                     ESMCFQVKDVLDSMHKDAGDKGENKNEKGKFLLRVDGGATVNNTLMQIQADLLGNPVV
                     RPADIETTALGAAYAAGLAVGVWTEEEIFSNGERMKKDTTFDPVLNDELRTKKVESWF
                     KAVERTFDLADLSL"
     misc_feature    91..1638
                     /gene="LOC139904553"
                     /note="glycerol kinase; Region: PLN02295"
                     /db_xref="CDD:215166"
     polyA_site      1803
                     /gene="LOC139904553"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctcccatcc atcaagttat atattcaagg caattttcac actccccaac aatatttcaa
       61 gcaataaaaa aaatggcaaa agaagaagct ttcattggat caattgatca aggaacaaca
      121 agcacaagat tcatcatcta tgatcaaaat gctaaatcca ttggatctca tcaagtggag
      181 ttcactcagt tctgcccaca agcaggatgg gttgaacatg atccaattga aatacttgaa
      241 agtgtgaaga tgtgcatatc aaaggcaatt gataaagcta ctgctgatgg gtataatgtt
      301 gataatggcc ttaaagctat tgggattact aatcaaagag aaacaactgt tgtttggagc
      361 aagtctactg gggttgctct ttataatgcc attgtttgga tggatagtag aaccacttca
      421 atttgcagga gactagagaa agaattatca gggggaagaa ctcatttttt acattcatgt
      481 ggattaccta ttagcacata ttttagtgca ctcaagctct tatggctact cgaaaacgtt
      541 gaacctgtga aagaagctgt taagaaaggc gatgcccttt ttggaaccat agattcgtgg
      601 ttaatttgga acttaacagg aggtgttaat aacggtttac acgtcactga tgtctcaaat
      661 gcatcaagaa ccatgcttat gaacttaaaa acacttgctt gggatgaatc aacattagaa
      721 acattaaaga ttcctaaaaa cattctcccg aaaattgtaa gtaatgctga agttatcggg
      781 catgtagcta aaggttgggt gattcccggg gtcccgattt cgggttgttt aggtgatcaa
      841 catgcagcca tgttgggcca atcttgtaaa aaaggcgagg cgaaaagtac ttacggaacg
      901 ggtgctttca tacttttaaa tacaggtgag gatgtgattg agtcaaagca cggtttgttg
      961 actactttgt cttttaagct tggaaaaaat gcacctacaa attacgcgct cgaggggtcg
     1021 atcgcaattg ctggtgcggc ggttcaatgg ctaagggata gtttagggat tattaaatcg
     1081 gctagtgaaa ttgaagagtt ggcctcaaag gttgactcga gtggtggtgt gtactttgtg
     1141 cctgctttta atggattgtt tgcaccgtgg tggcgtgatg atgcccgtgg ggtgttaatt
     1201 gggattactc ggtttacaaa taagtcgcac attgctcgag ctgttcttga aagtatgtgt
     1261 tttcaggtga aagatgtgtt ggactcgatg cataaagatg ctggtgacaa gggggaaaac
     1321 aaaaacgaaa agggaaagtt tttgcttagg gtggatggag gtgccacagt taataatacg
     1381 ctgatgcaga ttcaggctga cttgttgggt aacccggtgg tgagaccagc agacatagag
     1441 acaacagcac tcggtgcagc ctatgcagct ggtttagctg ttggagtttg gactgaagaa
     1501 gaaatatttt caaatggaga aagaatgaag aaagatacta ctttcgatcc tgttttgaac
     1561 gatgagttga ggacaaagaa ggtggaatct tggtttaaag cagtggaaag aacgtttgat
     1621 ctggctgatt tgtctctcta aacaaacagt catttgatca tttcattgtt taatcttcaa
     1681 ttccgtttct tagttttatc tttcttatta agaaacttgt cgttcaattt gtctttgttc
     1741 gtgttacata tataccatag tcttggtttt tatttgttta ataatgatcg cgtttcttac
     1801 tta
//
LOCUS       XM_071886473             554 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RNA-binding protein involved
            in heterochromatin assembly dri1-like (LOC139904554), mRNA.
ACCESSION   XM_071886473
VERSION     XM_071886473.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..554
                     /gene="LOC139904554"
                     /note="RNA-binding protein involved in heterochromatin
                     assembly dri1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139904554"
     CDS             82..477
                     /gene="LOC139904554"
                     /codon_start=1
                     /product="RNA-binding protein involved in heterochromatin
                     assembly dri1-like"
                     /protein_id="XP_071742574.1"
                     /db_xref="GeneID:139904554"
                     /translation="MSSGDWMCAACQHMNFKKRDACQKCHCPKFASPDEVSYYGTNRT
                     EVLAGDWYCATFNCGTHNYASRTACYRCGAFKDYSAMMGATTASCYGCDAGTVPGWKA
                     GDWICNRYGCGVHNYASRMECYKCKTPRE"
     misc_feature    97..156
                     /gene="LOC139904554"
                     /note="RanBP2-type Zn finger [structural motif]; Region:
                     RanBP2-type Zn finger"
                     /db_xref="CDD:275375"
     misc_feature    232..297
                     /gene="LOC139904554"
                     /note="RanBP2-type Zn finger [structural motif]; Region:
                     RanBP2-type Zn finger"
                     /db_xref="CDD:275375"
     misc_feature    382..474
                     /gene="LOC139904554"
                     /note="Zn-finger in Ran binding protein and others;
                     Region: zf-RanBP; cl02656"
                     /db_xref="CDD:413425"
     misc_feature    394..459
                     /gene="LOC139904554"
                     /note="RanBP2-type Zn finger [structural motif]; Region:
                     RanBP2-type Zn finger"
                     /db_xref="CDD:275375"
ORIGIN      
        1 atattgtcat atcatctctt gacattttgc ttcaatttcc ataaatctca gggttaactt
       61 caaaacttat aacaagagaa aatgagcagt ggagactgga tgtgtgctgc atgtcagcat
      121 atgaacttca agaaacgtga cgcctgccaa aaatgtcatt gtcccaaatt cgcatcccct
      181 gatgaggttt cgtattacgg tacgaacaga acggaagtat tggctggcga ctggtattgt
      241 gcgacattca actgtgggac acataattac gctagcagga ccgcatgtta tagatgtggt
      301 gcatttaaag attatagtgc tatgatgggt gcaaccactg catcatgtta tggttgtgat
      361 gctggcactg ttcccggatg gaaagcagga gactggattt gcaatagata tggttgtggg
      421 gtgcacaatt atgctagcag gatggaatgc tacaaatgca aaacaccaag ggaataaatt
      481 aaggatgcgg atatatatga acccaaagga agagaaccgt gtccttcatc agacatcatt
      541 tttcgtttta gtcc
//
LOCUS       XM_071886475            1530 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alkane hydroxylase MAH1-like
            (LOC139904555), mRNA.
ACCESSION   XM_071886475
VERSION     XM_071886475.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1530
                     /gene="LOC139904555"
                     /note="alkane hydroxylase MAH1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139904555"
     CDS             1..1530
                     /gene="LOC139904555"
                     /codon_start=1
                     /product="alkane hydroxylase MAH1-like"
                     /protein_id="XP_071742576.1"
                     /db_xref="GeneID:139904555"
                     /translation="MPFLDYLVVGSLVFSIILLLTLVSKFRNQRDVVPTNWPILGMTP
                     SSLVNIHRVHDYVTEVLTQTGGTFMSKGPWFAKMDMLFTTNPLDIHHILSKNFNNYPK
                     GKDFQKLFDIMGDGVFNSDGELWEIHRKVTMSVLKHPRFQTLLETILWNKVEKGLIPV
                     LESVSTQEKETDLQEIFQRFTFDTICKLLLDHDPETLSIEFRYVPCQKAFADAEEAIL
                     YRHYMPRSLWKLQQILKIGSEKKLSDARVTLDRFIYECLSRKSKELNNMNDAHKDENF
                     LVLTAMAKEFKDQGVVVGDQMKFLRDTLVNLMVAGKDSTSSTLSWFFYILAQKPTIQD
                     NILKEIHTHLGVKSGKRWRANELCEMVYLNGALSESLRLFPPLPFNHKIPLRRDILPS
                     GHEVDENMKIILSIYSMGRMKSIWGEDCMEFKPERWITKLGKIKHEPSYKFPAFNAGP
                     RTCLAKDMSLYEMKIVSTTIIQRYRIDLVEGHIVKPSGSMVLQMKHGVKVRLTRRSEM
                     N"
     misc_feature    202..1491
                     /gene="LOC139904555"
                     /note="cytochrome P450 family 86, subfamily A; Region:
                     CYP86A; cd11064"
                     /db_xref="CDD:410687"
     misc_feature    order(373..375,385..387,406..408,553..555,916..921,
                     928..933,940..945,952..954,1111..1113,1138..1140,
                     1144..1146,1216..1218,1333..1341,1351..1365,1372..1377)
                     /gene="LOC139904555"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410687"
     misc_feature    order(637..642,916..918,925..930,940..942,1132..1143)
                     /gene="LOC139904555"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410687"
ORIGIN      
        1 atgccatttc ttgattactt ggtcgttggg tctttagttt ttagcattat attgcttcta
       61 acattagtct ctaaatttcg aaaccagaga gatgttgtac ctacaaattg gccgattctt
      121 ggtatgacac cgtcatcact tgtaaacata caccgagtgc atgattacgt gactgaagta
      181 ttaactcaaa cgggcggaac attcatgtca aaagggcctt ggttcgcgaa aatggacatg
      241 ctttttacaa ccaatccttt agacatccat cacatattga gcaaaaactt taacaattat
      301 cccaaaggaa aagattttca aaagctcttc gatataatgg gagatggcgt gtttaactcg
      361 gacggcgagt tatgggagat ccaccgcaaa gtcaccatga gcgtacttaa gcaccctcgt
      421 tttcaaacct tactagaaac aatcttatgg aacaaggtgg aaaaagggct tataccggta
      481 cttgaatccg tttctacaca agaaaaggag acggatttgc aagaaatatt ccaaaggttt
      541 acttttgata ctatctgtaa attgttgtta gatcatgatc ccgaaacttt atctattgaa
      601 tttcgttacg ttccatgtca gaaggcgttt gcagacgctg aagaagctat tttgtatagg
      661 cattatatgc ctagaagcct ttggaaattg caacagatac ttaaaattgg gagtgagaag
      721 aagttgagtg atgcgagggt aactcttgat agatttatat acgaatgttt atcgagaaaa
      781 tcaaaagagt tgaataacat gaacgacgca cataaagatg aaaacttttt agtattaaca
      841 gctatggcga aagaattcaa agatcaaggt gtggtcgttg gagatcaaat gaagttttta
      901 agagacacat tagttaacct gatggttgca ggtaaagata gcactagcag cactctttct
      961 tggttctttt atatccttgc acaaaaacca accatacaag ataacatttt gaaagagatt
     1021 cacacacatt tgggtgtgaa atcgggtaaa agatggcgtg caaacgagct atgtgaaatg
     1081 gtttatctta acggagcatt aagtgaatcg ttaaggcttt ttccacccct tccgtttaac
     1141 cacaaaatcc cgttacggcg tgatattctt ccaagtggtc acgaggttga tgaaaatatg
     1201 aaaattattt tatctattta ttctatggga agaatgaaat caatatgggg tgaagattgt
     1261 atggagttta agcctgaaag gtggattact aaattaggaa agatcaaaca tgagccatct
     1321 tataagtttc cagcatttaa tgctggacca agaacttgtc tagctaaaga catgtcgtta
     1381 tatgaaatga agatagtgtc aacaacaatt attcaacgtt atcgtataga tctagtcgaa
     1441 ggtcatatag tgaaaccatc gggttcaatg gtgcttcaga tgaagcatgg tgttaaagtg
     1501 agattaacta gaagaagtga aatgaactaa
//
LOCUS       XR_011778863            5247 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X1, ncRNA.
ACCESSION   XR_011778863
VERSION     XR_011778863.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5247
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5247
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5247
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcaggtat tattgaatgt
     3721 ttgatgtttt attagttcat tttttgagct aaattgactg ctgaactgca tatttaaaac
     3781 tagattaatt atttccgttt aattgaaccc tattattttg ggaatgtata tataataccg
     3841 tattttgttc attgcaaaag cttctgtacc atttgaataa gtaccaagaa tctactaagg
     3901 ttaagtttaa gccatggtga caaggtgata tagtgtgaat ctttggagtt ttttaatgct
     3961 cattaaatac aaaatttatt ttctcttttt ttctattact gtcccattcc attgttttta
     4021 ttgatacaga cggtttgaag atttccggac ttggactaca atgattctat tcgtgaccat
     4081 gaagacccat aaagtaaaat tgtatattct gcttttacat aagatctttt ggttgattta
     4141 tactatcact tttggcattt cgtttattct ttaaggcttt atatgatatg atatgatatg
     4201 atgcacatgg caggatgctt ataggctgat ttgctttaca aactgataac caattaaccc
     4261 cgaatgttta cagggaacag ccatactggc aaatatgaat caatgtgaca aacagtgctt
     4321 taatggcatc attagggctt ttactgtgag gccgcaaaca cagggcaaag gctactacca
     4381 ggtcccacag gccttagatt tggacgaaat cgtaagtttg agcaactaac aatgccgaat
     4441 ttcccagcgc attactttca gttcgtagca agtcactttt gtaagacttc atcagctacg
     4501 ttgatgatcg atcgtgtggc gacccaaatt ataatcaaac aacaaggggg tgaattaacc
     4561 tcacaaatct taagtgacca ttctcccctc ataagatgtt cttttgctct gtattaactt
     4621 aacatggata caaactttac ctgctttatt ttctttatag catttacttg gtaggttttg
     4681 gcagtaacag aaggtctaca tgatgtttac actctgggta aagagccttc tgccttctgc
     4741 attacagtct tctcttatga gagatctctt aaaggcctta acttgtctct gaacttctcc
     4801 tatgggttga tcaacccata agaagctaca attttgttac ataagaagcg aatcacagta
     4861 agctgctctc caattgatcg tcttaaacac ggtagttgtg aggcttaggt tcttgggaat
     4921 gctgattatt ccttcctaaa agcagttgta ttgatatcat agactgtagt tatgtactga
     4981 aagaagggta tcgtagctta tcatagagtc aatattgtgt tgttattcga agtttatatc
     5041 gattttgagc gttcttctac attacgcatc atagtttatt tacgtgtact tcacttggcg
     5101 acggacctga agtgtttcaa ttcaattctt ggtgaacata taaaatgctt actcatgtaa
     5161 taattatatt tattacaaaa catgtgaact tcaaagtcct tatgtacagt ccttgtgtac
     5221 tcattcatgt gttagaaaaa aattagg
//
LOCUS       XR_011778864            5165 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X2, ncRNA.
ACCESSION   XR_011778864
VERSION     XR_011778864.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5165
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5165
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5165
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg acttggttga agtaactggt gcattgaagg aacttgagtt
      421 taaatccaat cactttaagg agagttggag aaacacaaca acatctagtt actatcttca
      481 cgtgtttgaa cggtttacta accattagtg aatgagttca ataattgtga ccaggtattg
      541 gcatgagttc aataatttca tgtttcatct aatacccata tcaggtaggt gtatgcaata
      601 aaagggagcc atatggtcat cttattttat atgtcgtgaa ctatattcac tttgattaag
      661 actgagatgt tttttaatat ttgatatatt ttctgttgat tttacttact ttgagtatgc
      721 agttttgacc tgcaaattgt tttagaattt aaaaatagtt tagaaagcaa ttcttctcat
      781 aatgaccaat ataatgaagt tgctgttata cggtttttga ataagtgaaa tttatttagt
      841 gttagtctta aagagctttc aaagtggcaa aattcttatg ggttcaactg aaaaatacct
      901 tgctctgtat gtggcaatat ttacccattt gcttttttat taagttttca tattattctt
      961 aattgagagt ttcataatat tgtatgtaca ttgttaatat tggatttaat acagaaataa
     1021 cttgttttga gtatatagta cataaagttt tcttttgtta gttgctgagg acataaatta
     1081 tggctgaaga ttcaactcct tttctgatga ggcataactt tgtaactttt tcattgtgtc
     1141 aagcttttac ctttgcttgt tttttttttt tatattcgaa ttgtagagaa tatcactttg
     1201 ccaggaagag agttatacta tcaaaccatt atcgagtgct ggaagaaagc tcccgaccgg
     1261 tgtgaatcta tagagcgtgt agaacaaaac aattgcgcac tcagatcaga ggttaaaaag
     1321 tattcaactg ctacctttag ttagtacacg tcttttcatt tcctgacctc ttcttccttt
     1381 tcatttatat cataaaaaat tagtttctta ttgttctcat atgggattta ctctatccat
     1441 gaatgaattg aaaatactta atgaaagctt gcctctttca gattttcgtt gtcgatttcc
     1501 aggtatatat gttgtctatt atttattttt attttttgcc tatagtagtt catagtagtg
     1561 gttgattaca gtgtgtggat ttaatatgtt tttttcaaaa atcattccat tcaactaatt
     1621 ttggatttat gagtttcata gttttatgtt ttttttaact gattatgagt cgtacagttg
     1681 atgttgtaat gtattgtgct atgtagatta aggtttgata ttgattgctg cattttggtg
     1741 ttttagtgtt aagcatgttg taatttacaa ggaaaacaaa ttgtgtatga gcttagttgt
     1801 tagttgatct cagtaacaaa caagacacaa agatacatca tgcacactaa tataagtatt
     1861 atgttgaatt aatttattgt tgtagacaca tttatttctt tagaggtttc tatgtgcagt
     1921 gtgccgaata tcttttaatg tatatgcgca ggctgaagag caaatacgct gatgagggaa
     1981 cataactata tggcagctgt actgaatgag ttctagaatg caaaaatcat ggcccacaca
     2041 agaagtttgc aactacaggt accatattga tgatgtgatt tttcatgatg ttcttatggt
     2101 atgactttga tgattggtta atggtcgaat gaaaaagata attcttgcaa aagagcaacc
     2161 atttatcaat cttaaaattt taaacatatt cacaggccat tgcctattgg aggtaaaaca
     2221 ttgagatttg agaagtgtta aaaggttctt ttcaactggg ttataccacc tggcactgaa
     2281 tgacccaaac agtgggttct aactgggttg gtctaaaggg ttattacagt ggctaagatt
     2341 ttgagtagca ggggtggatc tagaatgatg ttgtttctaa ttatatggtg tttattatat
     2401 tggactatat gtcgaaaaaa gacccatgtg cttcatcagt cgtaatatag tgtccacgtg
     2461 catgatcatg tgagatgtgt ttacattttt aattgtttaa ctaacattaa ttgttgtagg
     2521 ttacactctg agtgacctgt tgatggaaat ggaatgatgt acactttgta tgtaaacatt
     2581 agagatgcac tacaacataa taaaaaacgc aaatatcgat gacgtaaaaa ctcgactata
     2641 acaaccctca cttttccact tctgttatta ctattttgcc cttaggattt tgtatgctca
     2701 taaatttcta tttagcaaaa cgtcgactaa atagtaaact tttagtcgac actcgctgct
     2761 aatttaaaaa tttatgcttt tctgtaaaat cgtaactatt aatctatatg taaaaaaaaa
     2821 atatcttcta tctatataaa tcaccacact aattcggaca cgtggcgctt cctggttact
     2881 cctcagcatt tctaattttc tcagaatttt gaattaaaaa attcaatttt tatatatgac
     2941 tgacgcgtgt ccgcattcaa attttcgttt tagggttaaa atccttttca ttcttcttca
     3001 tcaattggaa cattcaaacc gtccctcttt ctctctctct ctcttcaaac catcaaacgg
     3061 taatcaaatg caattcaatc acaattgaag attcatccgt cgctagaatt atggcttcca
     3121 attccataaa cagatacgtt cttttttcct ttcataaact gatgatgcaa tctgttgatt
     3181 tagggtttcc aattttataa actcacgacg taatctcttg aatctcatat ggagatgatg
     3241 aatctgttta aaggtacgaa tattacaacc taatcgtcaa cgattatgag acctttagtc
     3301 ctcattctca aacgatttca atatttagtt atggattaat ctgttgcaag tattcaatgt
     3361 tttatgtatc gattaatgag tttttgtttt tgtttaattt ttattaatat tgatattcat
     3421 atatcgattt tgtgatggat gaatcttatt atttttcttc ttaaggtttt gttttttcct
     3481 tttcaggttg ttttatcaag tcttggaaaa gatttcaaat ggattatcaa attaaaacag
     3541 gtttttcatc tgaggtccct aaatcagaag ttgcaacttt gagccataag ggctttttat
     3601 gctcattttc tgcatttcgt tcaggtatta ttgaatgttt gatgttttat tagttcattt
     3661 tttgagctaa attgactgct gaactgcata tttaaaacta gattaattat ttccgtttaa
     3721 ttgaacccta ttattttggg aatgtatata taataccgta ttttgttcat tgcaaaagct
     3781 tctgtaccat ttgaataagt accaagaatc tactaaggtt aagtttaagc catggtgaca
     3841 aggtgatata gtgtgaatct ttggagtttt ttaatgctca ttaaatacaa aatttatttt
     3901 ctcttttttt ctattactgt cccattccat tgtttttatt gatacagacg gtttgaagat
     3961 ttccggactt ggactacaat gattctattc gtgaccatga agacccataa agtaaaattg
     4021 tatattctgc ttttacataa gatcttttgg ttgatttata ctatcacttt tggcatttcg
     4081 tttattcttt aaggctttat atgatatgat atgatatgat gcacatggca ggatgcttat
     4141 aggctgattt gctttacaaa ctgataacca attaaccccg aatgtttaca gggaacagcc
     4201 atactggcaa atatgaatca atgtgacaaa cagtgcttta atggcatcat tagggctttt
     4261 actgtgaggc cgcaaacaca gggcaaaggc tactaccagg tcccacaggc cttagatttg
     4321 gacgaaatcg taagtttgag caactaacaa tgccgaattt cccagcgcat tactttcagt
     4381 tcgtagcaag tcacttttgt aagacttcat cagctacgtt gatgatcgat cgtgtggcga
     4441 cccaaattat aatcaaacaa caagggggtg aattaacctc acaaatctta agtgaccatt
     4501 ctcccctcat aagatgttct tttgctctgt attaacttaa catggataca aactttacct
     4561 gctttatttt ctttatagca tttacttggt aggttttggc agtaacagaa ggtctacatg
     4621 atgtttacac tctgggtaaa gagccttctg ccttctgcat tacagtcttc tcttatgaga
     4681 gatctcttaa aggccttaac ttgtctctga acttctccta tgggttgatc aacccataag
     4741 aagctacaat tttgttacat aagaagcgaa tcacagtaag ctgctctcca attgatcgtc
     4801 ttaaacacgg tagttgtgag gcttaggttc ttgggaatgc tgattattcc ttcctaaaag
     4861 cagttgtatt gatatcatag actgtagtta tgtactgaaa gaagggtatc gtagcttatc
     4921 atagagtcaa tattgtgttg ttattcgaag tttatatcga ttttgagcgt tcttctacat
     4981 tacgcatcat agtttattta cgtgtacttc acttggcgac ggacctgaag tgtttcaatt
     5041 caattcttgg tgaacatata aaatgcttac tcatgtaata attatattta ttacaaaaca
     5101 tgtgaacttc aaagtcctta tgtacagtcc ttgtgtactc attcatgtgt tagaaaaaaa
     5161 ttagg
//
LOCUS       XR_011778865            4595 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X3, ncRNA.
ACCESSION   XR_011778865
VERSION     XR_011778865.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4595
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4595
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4595
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccagagaa tatcactttg ccaggaagag agttatacta tcaaaccatt
      661 atcgagtgct ggaagaaagc tcccgaccgg tgtgaatcta tagagcgtgt agaacaaaac
      721 aattgcgcac tcagatcaga ggttaaaaag tattcaactg ctacctttag ttagtacacg
      781 tcttttcatt tcctgacctc ttcttccttt tcatttatat cataaaaaat tagtttctta
      841 ttgttctcat atgggattta ctctatccat gaatgaattg aaaatactta atgaaagctt
      901 gcctctttca gattttcgtt gtcgatttcc aggtatatat gttgtctatt atttattttt
      961 attttttgcc tatagtagtt catagtagtg gttgattaca gtgtgtggat ttaatatgtt
     1021 tttttcaaaa atcattccat tcaactaatt ttggatttat gagtttcata gttttatgtt
     1081 ttttttaact gattatgagt cgtacagttg atgttgtaat gtattgtgct atgtagatta
     1141 aggtttgata ttgattgctg cattttggtg ttttagtgtt aagcatgttg taatttacaa
     1201 ggaaaacaaa ttgtgtatga gcttagttgt tagttgatct cagtaacaaa caagacacaa
     1261 agatacatca tgcacactaa tataagtatt atgttgaatt aatttattgt tgtagacaca
     1321 tttatttctt tagaggtttc tatgtgcagt gtgccgaata tcttttaatg tatatgcgca
     1381 ggctgaagag caaatacgct gatgagggaa cataactata tggcagctgt actgaatgag
     1441 ttctagaatg caaaaatcat ggcccacaca agaagtttgc aactacaggt accatattga
     1501 tgatgtgatt tttcatgatg ttcttatggt atgactttga tgattggtta atggtcgaat
     1561 gaaaaagata attcttgcaa aagagcaacc atttatcaat cttaaaattt taaacatatt
     1621 cacaggccat tgcctattgg aggtaaaaca ttgagatttg agaagtgtta aaaggttctt
     1681 ttcaactggg ttataccacc tggcactgaa tgacccaaac agtgggttct aactgggttg
     1741 gtctaaaggg ttattacagt ggctaagatt ttgagtagca ggggtggatc tagaatgatg
     1801 ttgtttctaa ttatatggtg tttattatat tggactatat gtcgaaaaaa gacccatgtg
     1861 cttcatcagt cgtaatatag tgtccacgtg catgatcatg tgagatgtgt ttacattttt
     1921 aattgtttaa ctaacattaa ttgttgtagg ttacactctg agtgacctgt tgatggaaat
     1981 ggaatgatgt acactttgta tgtaaacatt agagatgcac tacaacataa taaaaaacgc
     2041 aaatatcgat gacgtaaaaa ctcgactata acaaccctca cttttccact tctgttatta
     2101 ctattttgcc cttaggattt tgtatgctca taaatttcta tttagcaaaa cgtcgactaa
     2161 atagtaaact tttagtcgac actcgctgct aatttaaaaa tttatgcttt tctgtaaaat
     2221 cgtaactatt aatctatatg taaaaaaaaa atatcttcta tctatataaa tcaccacact
     2281 aattcggaca cgtggcgctt cctggttact cctcagcatt tctaattttc tcagaatttt
     2341 gaattaaaaa attcaatttt tatatatgac tgacgcgtgt ccgcattcaa attttcgttt
     2401 tagggttaaa atccttttca ttcttcttca tcaattggaa cattcaaacc gtccctcttt
     2461 ctctctctct ctcttcaaac catcaaacgg taatcaaatg caattcaatc acaattgaag
     2521 attcatccgt cgctagaatt atggcttcca attccataaa cagatacgtt cttttttcct
     2581 ttcataaact gatgatgcaa tctgttgatt tagggtttcc aattttataa actcacgacg
     2641 taatctcttg aatctcatat ggagatgatg aatctgttta aaggtacgaa tattacaacc
     2701 taatcgtcaa cgattatgag acctttagtc ctcattctca aacgatttca atatttagtt
     2761 atggattaat ctgttgcaag tattcaatgt tttatgtatc gattaatgag tttttgtttt
     2821 tgtttaattt ttattaatat tgatattcat atatcgattt tgtgatggat gaatcttatt
     2881 atttttcttc ttaaggtttt gttttttcct tttcaggttg ttttatcaag tcttggaaaa
     2941 gatttcaaat ggattatcaa attaaaacag gtttttcatc tgaggtccct aaatcagaag
     3001 ttgcaacttt gagccataag ggctttttat gctcattttc tgcatttcgt tcaggtatta
     3061 ttgaatgttt gatgttttat tagttcattt tttgagctaa attgactgct gaactgcata
     3121 tttaaaacta gattaattat ttccgtttaa ttgaacccta ttattttggg aatgtatata
     3181 taataccgta ttttgttcat tgcaaaagct tctgtaccat ttgaataagt accaagaatc
     3241 tactaaggtt aagtttaagc catggtgaca aggtgatata gtgtgaatct ttggagtttt
     3301 ttaatgctca ttaaatacaa aatttatttt ctcttttttt ctattactgt cccattccat
     3361 tgtttttatt gatacagacg gtttgaagat ttccggactt ggactacaat gattctattc
     3421 gtgaccatga agacccataa agtaaaattg tatattctgc ttttacataa gatcttttgg
     3481 ttgatttata ctatcacttt tggcatttcg tttattcttt aaggctttat atgatatgat
     3541 atgatatgat gcacatggca ggatgcttat aggctgattt gctttacaaa ctgataacca
     3601 attaaccccg aatgtttaca gggaacagcc atactggcaa atatgaatca atgtgacaaa
     3661 cagtgcttta atggcatcat tagggctttt actgtgaggc cgcaaacaca gggcaaaggc
     3721 tactaccagg tcccacaggc cttagatttg gacgaaatcg taagtttgag caactaacaa
     3781 tgccgaattt cccagcgcat tactttcagt tcgtagcaag tcacttttgt aagacttcat
     3841 cagctacgtt gatgatcgat cgtgtggcga cccaaattat aatcaaacaa caagggggtg
     3901 aattaacctc acaaatctta agtgaccatt ctcccctcat aagatgttct tttgctctgt
     3961 attaacttaa catggataca aactttacct gctttatttt ctttatagca tttacttggt
     4021 aggttttggc agtaacagaa ggtctacatg atgtttacac tctgggtaaa gagccttctg
     4081 ccttctgcat tacagtcttc tcttatgaga gatctcttaa aggccttaac ttgtctctga
     4141 acttctccta tgggttgatc aacccataag aagctacaat tttgttacat aagaagcgaa
     4201 tcacagtaag ctgctctcca attgatcgtc ttaaacacgg tagttgtgag gcttaggttc
     4261 ttgggaatgc tgattattcc ttcctaaaag cagttgtatt gatatcatag actgtagtta
     4321 tgtactgaaa gaagggtatc gtagcttatc atagagtcaa tattgtgttg ttattcgaag
     4381 tttatatcga ttttgagcgt tcttctacat tacgcatcat agtttattta cgtgtacttc
     4441 acttggcgac ggacctgaag tgtttcaatt caattcttgg tgaacatata aaatgcttac
     4501 tcatgtaata attatattta ttacaaaaca tgtgaacttc aaagtcctta tgtacagtcc
     4561 ttgtgtactc attcatgtgt tagaaaaaaa ttagg
//
LOCUS       XR_011778866            5761 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X4, ncRNA.
ACCESSION   XR_011778866
VERSION     XR_011778866.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5761
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5761
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5761
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcaggtat tattgaatgt
     3721 ttgatgtttt attagttcat tttttgagct aaattgactg ctgaactgca tatttaaaac
     3781 tagattaatt atttccgttt aattgaaccc tattattttg ggaatgtata tataataccg
     3841 tattttgttc attgcaaaag cttctgtacc atttgaataa gtaccaagaa tctactaagg
     3901 ttaagtttaa gccatggtga caaggtgata tagtgtgaat ctttggagtt ttttaatgct
     3961 cattaaatac aaaatttatt ttctcttttt ttctattact gtcccattcc attgttttta
     4021 ttgatacaga cggtttgaag atttccggac ttggactaca atgattctat tcgtgaccat
     4081 gaagacccat aaagtaaaat tgtatattct gcttttacat aagatctttt ggttgattta
     4141 tactatcact tttggcattt cgtttattct ttaaggcttt atatgatatg atatgatatg
     4201 atgcacatgg caggatgctt ataggctgat ttgctttaca aactgataac caattaaccc
     4261 cgaatgttta cagggaacag ccatactggc aaatatgaat caatgtgaca aacagtgctt
     4321 taatggcatc attagggctt ttactgtgag gccgcaaaca cagggcaaag gctactacca
     4381 ggtcccacag gccttagatt tggacgaaat cgtaagtttg agcaactaac aatgccgaat
     4441 ttcccagcgc attactttca gttcgtagca agtcactttt gtaagacttc atcagctacg
     4501 ttgatgatcg atcgtgtggc gacccaaatt ataatcaaac aacaaggggg tgaattaacc
     4561 tcacaaatct taagtgacca ttctcccctc ataagatgtt cttttgctct gtattaactt
     4621 aacatggata caaactttac ctgctttatt ttctttatag catttacttg gtaggttttg
     4681 gcagtaacag aaggtctaca tgatgtttac actctgggta aagagccttc tgccttctgc
     4741 attacagtct tctcttatga gagatctctt aaaggcctta acttgtctct gaacttctcc
     4801 tatgggttga tcaacccata agaagctaca attttgttac ataagaagcg aatcacagta
     4861 agctgctctc caattgatcg tcttaaacac ggtagttgtg aggcttaggt tcttgggaat
     4921 gctgattatt ccttcctaaa agcagttgta ttgatatcat agactgtagt tatgtactga
     4981 aagaagggta tcgtagctta tcatagagtc aatattgtgt tgttattcga agtttatatc
     5041 gattttgagc gttcttctac attacgaaac ccaatcttag aagatctcca aatgaaaact
     5101 gaggaagact tggataggtt gtcaatgtca cacttaatac tcttaatgta aatcaggcag
     5161 agaacattat tctaaagcag taattttctt tacacctatt tttcacttaa gaaagtgtgc
     5221 gcttgatcaa aaaagtttat agtcattttc attataagag tgattgtata atagaaaagc
     5281 agtttcataa gaattgtatg ggttgtggat tcattgtttg caatcgctct gaagaacact
     5341 tggatatgtt gttaatggca cacttaatat tgttgctgca gaaactaacc cctaggtaat
     5401 agctctcttt gtactgttga tggtgcttta aaaaacccgt ttgatctact tttaagtaaa
     5461 tgaaacccac agtgacccgc tttcacgtta atgggctaaa aatcaacatc tcatggacct
     5521 aagaagcata cttatacatt taacagtgtt tttaatgttt cttaatgttt cctattgcag
     5581 catcatagtt tatttacgtg tacttcactt ggcgacggac ctgaagtgtt tcaattcaat
     5641 tcttggtgaa catataaaat gcttactcat gtaataatta tatttattac aaaacatgtg
     5701 aacttcaaag tccttatgta cagtccttgt gtactcattc atgtgttaga aaaaaattag
     5761 g
//
LOCUS       XR_011778867            5014 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X5, ncRNA.
ACCESSION   XR_011778867
VERSION     XR_011778867.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5014
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5014
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggttgt tttatcaagt cttggaaaag
     3361 atttcaaatg gattatcaaa ttaaaacagg tttttcatct gaggtcccta aatcagaagt
     3421 tgcaactttg agccataagg gctttttatg ctcattttct gcatttcgtt caggtattat
     3481 tgaatgtttg atgttttatt agttcatttt ttgagctaaa ttgactgctg aactgcatat
     3541 ttaaaactag attaattatt tccgtttaat tgaaccctat tattttggga atgtatatat
     3601 aataccgtat tttgttcatt gcaaaagctt ctgtaccatt tgaataagta ccaagaatct
     3661 actaaggtta agtttaagcc atggtgacaa ggtgatatag tgtgaatctt tggagttttt
     3721 taatgctcat taaatacaaa atttattttc tctttttttc tattactgtc ccattccatt
     3781 gtttttattg atacagacgg tttgaagatt tccggacttg gactacaatg attctattcg
     3841 tgaccatgaa gacccataaa gtaaaattgt atattctgct tttacataag atcttttggt
     3901 tgatttatac tatcactttt ggcatttcgt ttattcttta aggctttata tgatatgata
     3961 tgatatgatg cacatggcag gatgcttata ggctgatttg ctttacaaac tgataaccaa
     4021 ttaaccccga atgtttacag ggaacagcca tactggcaaa tatgaatcaa tgtgacaaac
     4081 agtgctttaa tggcatcatt agggctttta ctgtgaggcc gcaaacacag ggcaaaggct
     4141 actaccaggt cccacaggcc ttagatttgg acgaaatcgt aagtttgagc aactaacaat
     4201 gccgaatttc ccagcgcatt actttcagtt cgtagcaagt cacttttgta agacttcatc
     4261 agctacgttg atgatcgatc gtgtggcgac ccaaattata atcaaacaac aagggggtga
     4321 attaacctca caaatcttaa gtgaccattc tcccctcata agatgttctt ttgctctgta
     4381 ttaacttaac atggatacaa actttacctg ctttattttc tttatagcat ttacttggta
     4441 ggttttggca gtaacagaag gtctacatga tgtttacact ctgggtaaag agccttctgc
     4501 cttctgcatt acagtcttct cttatgagag atctcttaaa ggccttaact tgtctctgaa
     4561 cttctcctat gggttgatca acccataaga agctacaatt ttgttacata agaagcgaat
     4621 cacagtaagc tgctctccaa ttgatcgtct taaacacggt agttgtgagg cttaggttct
     4681 tgggaatgct gattattcct tcctaaaagc agttgtattg atatcataga ctgtagttat
     4741 gtactgaaag aagggtatcg tagcttatca tagagtcaat attgtgttgt tattcgaagt
     4801 ttatatcgat tttgagcgtt cttctacatt acgcatcata gtttatttac gtgtacttca
     4861 cttggcgacg gacctgaagt gtttcaattc aattcttggt gaacatataa aatgcttact
     4921 catgtaataa ttatatttat tacaaaacat gtgaacttca aagtccttat gtacagtcct
     4981 tgtgtactca ttcatgtgtt agaaaaaaat tagg
//
LOCUS       XR_011778868            4615 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X6, ncRNA.
ACCESSION   XR_011778868
VERSION     XR_011778868.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4615
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4615
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agctgaagag caaatacgct gatgagggaa cataactata
     1441 tggcagctgt actgaatgag ttctagaatg caaaaatcat ggcccacaca agaagtttgc
     1501 aactacaggt accatattga tgatgtgatt tttcatgatg ttcttatggt atgactttga
     1561 tgattggtta atggtcgaat gaaaaagata attcttgcaa aagagcaacc atttatcaat
     1621 cttaaaattt taaacatatt cacaggccat tgcctattgg aggtaaaaca ttgagatttg
     1681 agaagtgtta aaaggttctt ttcaactggg ttataccacc tggcactgaa tgacccaaac
     1741 agtgggttct aactgggttg gtctaaaggg ttattacagt ggctaagatt ttgagtagca
     1801 ggggtggatc tagaatgatg ttgtttctaa ttatatggtg tttattatat tggactatat
     1861 gtcgaaaaaa gacccatgtg cttcatcagt cgtaatatag tgtccacgtg catgatcatg
     1921 tgagatgtgt ttacattttt aattgtttaa ctaacattaa ttgttgtagg ttacactctg
     1981 agtgacctgt tgatggaaat ggaatgatgt acactttgta tgtaaacatt agagatgcac
     2041 tacaacataa taaaaaacgc aaatatcgat gacgtaaaaa ctcgactata acaaccctca
     2101 cttttccact tctgttatta ctattttgcc cttaggattt tgtatgctca taaatttcta
     2161 tttagcaaaa cgtcgactaa atagtaaact tttagtcgac actcgctgct aatttaaaaa
     2221 tttatgcttt tctgtaaaat cgtaactatt aatctatatg taaaaaaaaa atatcttcta
     2281 tctatataaa tcaccacact aattcggaca cgtggcgctt cctggttact cctcagcatt
     2341 tctaattttc tcagaatttt gaattaaaaa attcaatttt tatatatgac tgacgcgtgt
     2401 ccgcattcaa attttcgttt tagggttaaa atccttttca ttcttcttca tcaattggaa
     2461 cattcaaacc gtccctcttt ctctctctct ctcttcaaac catcaaacgg taatcaaatg
     2521 caattcaatc acaattgaag attcatccgt cgctagaatt atggcttcca attccataaa
     2581 cagatacgtt cttttttcct ttcataaact gatgatgcaa tctgttgatt tagggtttcc
     2641 aattttataa actcacgacg taatctcttg aatctcatat ggagatgatg aatctgttta
     2701 aaggtacgaa tattacaacc taatcgtcaa cgattatgag acctttagtc ctcattctca
     2761 aacgatttca atatttagtt atggattaat ctgttgcaag tattcaatgt tttatgtatc
     2821 gattaatgag tttttgtttt tgtttaattt ttattaatat tgatattcat atatcgattt
     2881 tgtgatggat gaatcttatt atttttcttc ttaaggtttt gttttttcct tttcaggttg
     2941 ttttatcaag tcttggaaaa gatttcaaat ggattatcaa attaaaacag gtttttcatc
     3001 tgaggtccct aaatcagaag ttgcaacttt gagccataag ggctttttat gctcattttc
     3061 tgcatttcgt tcaggtatta ttgaatgttt gatgttttat tagttcattt tttgagctaa
     3121 attgactgct gaactgcata tttaaaacta gattaattat ttccgtttaa ttgaacccta
     3181 ttattttggg aatgtatata taataccgta ttttgttcat tgcaaaagct tctgtaccat
     3241 ttgaataagt accaagaatc tactaaggtt aagtttaagc catggtgaca aggtgatata
     3301 gtgtgaatct ttggagtttt ttaatgctca ttaaatacaa aatttatttt ctcttttttt
     3361 ctattactgt cccattccat tgtttttatt gatacagacg gtttgaagat ttccggactt
     3421 ggactacaat gattctattc gtgaccatga agacccataa agtaaaattg tatattctgc
     3481 ttttacataa gatcttttgg ttgatttata ctatcacttt tggcatttcg tttattcttt
     3541 aaggctttat atgatatgat atgatatgat gcacatggca ggatgcttat aggctgattt
     3601 gctttacaaa ctgataacca attaaccccg aatgtttaca gggaacagcc atactggcaa
     3661 atatgaatca atgtgacaaa cagtgcttta atggcatcat tagggctttt actgtgaggc
     3721 cgcaaacaca gggcaaaggc tactaccagg tcccacaggc cttagatttg gacgaaatcg
     3781 taagtttgag caactaacaa tgccgaattt cccagcgcat tactttcagt tcgtagcaag
     3841 tcacttttgt aagacttcat cagctacgtt gatgatcgat cgtgtggcga cccaaattat
     3901 aatcaaacaa caagggggtg aattaacctc acaaatctta agtgaccatt ctcccctcat
     3961 aagatgttct tttgctctgt attaacttaa catggataca aactttacct gctttatttt
     4021 ctttatagca tttacttggt aggttttggc agtaacagaa ggtctacatg atgtttacac
     4081 tctgggtaaa gagccttctg ccttctgcat tacagtcttc tcttatgaga gatctcttaa
     4141 aggccttaac ttgtctctga acttctccta tgggttgatc aacccataag aagctacaat
     4201 tttgttacat aagaagcgaa tcacagtaag ctgctctcca attgatcgtc ttaaacacgg
     4261 tagttgtgag gcttaggttc ttgggaatgc tgattattcc ttcctaaaag cagttgtatt
     4321 gatatcatag actgtagtta tgtactgaaa gaagggtatc gtagcttatc atagagtcaa
     4381 tattgtgttg ttattcgaag tttatatcga ttttgagcgt tcttctacat tacgcatcat
     4441 agtttattta cgtgtacttc acttggcgac ggacctgaag tgtttcaatt caattcttgg
     4501 tgaacatata aaatgcttac tcatgtaata attatattta ttacaaaaca tgtgaacttc
     4561 aaagtcctta tgtacagtcc ttgtgtactc attcatgtgt tagaaaaaaa ttagg
//
LOCUS       XR_011778869            5233 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X7, ncRNA.
ACCESSION   XR_011778869
VERSION     XR_011778869.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5233
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5233
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5233
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagg taagtctttg gttgttggca aagtgtgttg tgtgcctaaa
      241 catcactgag gcaagaagct aagagacgtt cattgcaata ttgtggccat cttaatgttt
      301 ttaatgattg ttgctcatct ggagggcaat ctagctctcc ctctggtact gctctgctat
      361 tgaaggagta ggttcatact ctgctcttgg attcaaagct cttcataatg agcatacaac
      421 aagtggtaat ttctttttcg ttgttttagc ttggttgaag taactggtgc attgaaggaa
      481 cttgagttta aatccaatca ctttaaggag agttggagaa acacaacaac atctagttac
      541 tatcttcacg tgtttgaacg gtttactaac cattagtgaa tgagttcaat aattgtgacc
      601 aggtattggc atgagttcaa taatttcatg tttcatctaa tacccatatc aggtaggtgt
      661 atgcaataaa agggagccat atggtcatct tattttatat gtcgtgaact atattcactt
      721 tgattaagac tgagatgttt tttaatattt gatatatttt ctgttgattt tacttacttt
      781 gagtatgcag ttttgacctg caaattgttt tagaatttaa aaatagttta gaaagcaatt
      841 cttctcataa tgaccaatat aatgaagttg ctgttatacg gtttttgaat aagtgaaatt
      901 tatttagtgt tagtcttaaa gagctttcaa agtggcaaaa ttcttatggg ttcaactgaa
      961 aaataccttg ctctgtatgt ggcaatattt acccatttgc ttttttatta agttttcata
     1021 ttattcttaa ttgagagttt cataatattg tatgtacatt gttaatattg gatttaatac
     1081 agaaataact tgttttgagt atatagtaca taaagttttc ttttgttagt tgctgaggac
     1141 ataaattatg gctgaagatt caactccttt tctgatgagg cataactttg taactttttc
     1201 attgtgtcaa gcttttacct ttgcttgttt ttttttttta tattcgaatt gtagagaata
     1261 tcactttgcc aggaagagag ttatactatc aaaccattat cgagtgctgg aagaaagctc
     1321 ccgaccggtg tgaatctata gagcgtgtag aacaaaacaa ttgcgcactc agatcagagg
     1381 ttaaaaagta ttcaactgct acctttagtt agtacacgtc ttttcatttc ctgacctctt
     1441 cttccttttc atttatatca taaaaaatta gtttcttatt gttctcatat gggatttact
     1501 ctatccatga atgaattgaa aatacttaat gaaagcttgc ctctttcaga ttttcgttgt
     1561 cgatttccag gtatatatgt tgtctattat ttatttttat tttttgccta tagtagttca
     1621 tagtagtggt tgattacagt gtgtggattt aatatgtttt tttcaaaaat cattccattc
     1681 aactaatttt ggatttatga gtttcatagt tttatgtttt ttttaactga ttatgagtcg
     1741 tacagttgat gttgtaatgt attgtgctat gtagattaag gtttgatatt gattgctgca
     1801 ttttggtgtt ttagtgttaa gcatgttgta atttacaagg aaaacaaatt gtgtatgagc
     1861 ttagttgtta gttgatctca gtaacaaaca agacacaaag atacatcatg cacactaata
     1921 taagtattat gttgaattaa tttattgttg tagacacatt tatttcttta gaggtttcta
     1981 tgtgcagtgt gccgaatatc ttttaatgta tatgcgcagg ctgaagagca aatacgctga
     2041 tgagggaaca taactatatg gcagctgtac tgaatgagtt ctagaatgca aaaatcatgg
     2101 cccacacaag aagtttgcaa ctacaggtac catattgatg atgtgatttt tcatgatgtt
     2161 cttatggtat gactttgatg attggttaat ggtcgaatga aaaagataat tcttgcaaaa
     2221 gagcaaccat ttatcaatct taaaatttta aacatattca caggccattg cctattggag
     2281 gtaaaacatt gagatttgag aagtgttaaa aggttctttt caactgggtt ataccacctg
     2341 gcactgaatg acccaaacag tgggttctaa ctgggttggt ctaaagggtt attacagtgg
     2401 ctaagatttt gagtagcagg ggtggatcta gaatgatgtt gtttctaatt atatggtgtt
     2461 tattatattg gactatatgt cgaaaaaaga cccatgtgct tcatcagtcg taatatagtg
     2521 tccacgtgca tgatcatgtg agatgtgttt acatttttaa ttgtttaact aacattaatt
     2581 gttgtaggtt acactctgag tgacctgttg atggaaatgg aatgatgtac actttgtatg
     2641 taaacattag agatgcacta caacataata aaaaacgcaa atatcgatga cgtaaaaact
     2701 cgactataac aaccctcact tttccacttc tgttattact attttgccct taggattttg
     2761 tatgctcata aatttctatt tagcaaaacg tcgactaaat agtaaacttt tagtcgacac
     2821 tcgctgctaa tttaaaaatt tatgcttttc tgtaaaatcg taactattaa tctatatgta
     2881 aaaaaaaaat atcttctatc tatataaatc accacactaa ttcggacacg tggcgcttcc
     2941 tggttactcc tcagcatttc taattttctc agaattttga attaaaaaat tcaattttta
     3001 tatatgactg acgcgtgtcc gcattcaaat tttcgtttta gggttaaaat ccttttcatt
     3061 cttcttcatc aattggaaca ttcaaaccgt ccctctttct ctctctctct cttcaaacca
     3121 tcaaacggta atcaaatgca attcaatcac aattgaagat tcatccgtcg ctagaattat
     3181 ggcttccaat tccataaaca gatacgttct tttttccttt cataaactga tgatgcaatc
     3241 tgttgattta gggtttccaa ttttataaac tcacgacgta atctcttgaa tctcatatgg
     3301 agatgatgaa tctgtttaaa ggtacgaata ttacaaccta atcgtcaacg attatgagac
     3361 ctttagtcct cattctcaaa cgatttcaat atttagttat ggattaatct gttgcaagta
     3421 ttcaatgttt tatgtatcga ttaatgagtt tttgtttttg tttaattttt attaatattg
     3481 atattcatat atcgattttg tgatggatga atcttattat ttttcttctt aaggttttgt
     3541 tttttccttt tcaggttgtt ttatcaagtc ttggaaaaga tttcaaatgg attatcaaat
     3601 taaaacaggt ttttcatctg aggtccctaa atcagaagtt gcaactttga gccataaggg
     3661 ctttttatgc tcattttctg catttcgttc aggtattatt gaatgtttga tgttttatta
     3721 gttcattttt tgagctaaat tgactgctga actgcatatt taaaactaga ttaattattt
     3781 ccgtttaatt gaaccctatt attttgggaa tgtatatata ataccgtatt ttgttcattg
     3841 caaaagcttc tgtaccattt gaataagtac caagaatcta ctaaggttaa gtttaagcca
     3901 tggtgacaag gtgatatagt gtgaatcttt ggagtttttt aatgctcatt aaatacaaaa
     3961 tttattttct ctttttttct attactgtcc cattccattg tttttattga tacagacggt
     4021 ttgaagattt ccggacttgg actacaatga ttctattcgt gaccatgaag acccataaag
     4081 taaaattgta tattctgctt ttacataaga tcttttggtt gatttatact atcacttttg
     4141 gcatttcgtt tattctttaa ggctttatat gatatgatat gatatgatgc acatggcagg
     4201 atgcttatag gctgatttgc tttacaaact gataaccaat taaccccgaa tgtttacagg
     4261 gaacagccat actggcaaat atgaatcaat gtgacaaaca gtgctttaat ggcatcatta
     4321 gggcttttac tgtgaggccg caaacacagg gcaaaggcta ctaccaggtc ccacaggcct
     4381 tagatttgga cgaaatcgta agtttgagca actaacaatg ccgaatttcc cagcgcatta
     4441 ctttcagttc gtagcaagtc acttttgtaa gacttcatca gctacgttga tgatcgatcg
     4501 tgtggcgacc caaattataa tcaaacaaca agggggtgaa ttaacctcac aaatcttaag
     4561 tgaccattct cccctcataa gatgttcttt tgctctgtat taacttaaca tggatacaaa
     4621 ctttacctgc tttattttct ttatagcatt tacttggtag gttttggcag taacagaagg
     4681 tctacatgat gtttacactc tgggtaaaga gccttctgcc ttctgcatta cagtcttctc
     4741 ttatgagaga tctcttaaag gccttaactt gtctctgaac ttctcctatg ggttgatcaa
     4801 cccataagaa gctacaattt tgttacataa gaagcgaatc acagtaagct gctctccaat
     4861 tgatcgtctt aaacacggta gttgtgaggc ttaggttctt gggaatgctg attattcctt
     4921 cctaaaagca gttgtattga tatcatagac tgtagttatg tactgaaaga agggtatcgt
     4981 agcttatcat agagtcaata ttgtgttgtt attcgaagtt tatatcgatt ttgagcgttc
     5041 ttctacatta cgcatcatag tttatttacg tgtacttcac ttggcgacgg acctgaagtg
     5101 tttcaattca attcttggtg aacatataaa atgcttactc atgtaataat tatatttatt
     5161 acaaaacatg tgaacttcaa agtccttatg tacagtcctt gtgtactcat tcatgtgtta
     5221 gaaaaaaatt agg
//
LOCUS       XR_011778870            4786 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X8, ncRNA.
ACCESSION   XR_011778870
VERSION     XR_011778870.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4786
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4786
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gttacactct gagtgacctg
     2161 ttgatggaaa tggaatgatg tacactttgt atgtaaacat tagagatgca ctacaacata
     2221 ataaaaaacg caaatatcga tgacgtaaaa actcgactat aacaaccctc acttttccac
     2281 ttctgttatt actattttgc ccttaggatt ttgtatgctc ataaatttct atttagcaaa
     2341 acgtcgacta aatagtaaac ttttagtcga cactcgctgc taatttaaaa atttatgctt
     2401 ttctgtaaaa tcgtaactat taatctatat gtaaaaaaaa aatatcttct atctatataa
     2461 atcaccacac taattcggac acgtggcgct tcctggttac tcctcagcat ttctaatttt
     2521 ctcagaattt tgaattaaaa aattcaattt ttatatatga ctgacgcgtg tccgcattca
     2581 aattttcgtt ttagggttaa aatccttttc attcttcttc atcaattgga acattcaaac
     2641 cgtccctctt tctctctctc tctcttcaaa ccatcaaacg gtaatcaaat gcaattcaat
     2701 cacaattgaa gattcatccg tcgctagaat tatggcttcc aattccataa acagatacgt
     2761 tcttttttcc tttcataaac tgatgatgca atctgttgat ttagggtttc caattttata
     2821 aactcacgac gtaatctctt gaatctcata tggagatgat gaatctgttt aaaggtacga
     2881 atattacaac ctaatcgtca acgattatga gacctttagt cctcattctc aaacgatttc
     2941 aatatttagt tatggattaa tctgttgcaa gtattcaatg ttttatgtat cgattaatga
     3001 gtttttgttt ttgtttaatt tttattaata ttgatattca tatatcgatt ttgtgatgga
     3061 tgaatcttat tatttttctt cttaaggttt tgttttttcc ttttcaggtt gttttatcaa
     3121 gtcttggaaa agatttcaaa tggattatca aattaaaaca ggtttttcat ctgaggtccc
     3181 taaatcagaa gttgcaactt tgagccataa gggcttttta tgctcatttt ctgcatttcg
     3241 ttcaggtatt attgaatgtt tgatgtttta ttagttcatt ttttgagcta aattgactgc
     3301 tgaactgcat atttaaaact agattaatta tttccgttta attgaaccct attattttgg
     3361 gaatgtatat ataataccgt attttgttca ttgcaaaagc ttctgtacca tttgaataag
     3421 taccaagaat ctactaaggt taagtttaag ccatggtgac aaggtgatat agtgtgaatc
     3481 tttggagttt tttaatgctc attaaataca aaatttattt tctctttttt tctattactg
     3541 tcccattcca ttgtttttat tgatacagac ggtttgaaga tttccggact tggactacaa
     3601 tgattctatt cgtgaccatg aagacccata aagtaaaatt gtatattctg cttttacata
     3661 agatcttttg gttgatttat actatcactt ttggcatttc gtttattctt taaggcttta
     3721 tatgatatga tatgatatga tgcacatggc aggatgctta taggctgatt tgctttacaa
     3781 actgataacc aattaacccc gaatgtttac agggaacagc catactggca aatatgaatc
     3841 aatgtgacaa acagtgcttt aatggcatca ttagggcttt tactgtgagg ccgcaaacac
     3901 agggcaaagg ctactaccag gtcccacagg ccttagattt ggacgaaatc gtaagtttga
     3961 gcaactaaca atgccgaatt tcccagcgca ttactttcag ttcgtagcaa gtcacttttg
     4021 taagacttca tcagctacgt tgatgatcga tcgtgtggcg acccaaatta taatcaaaca
     4081 acaagggggt gaattaacct cacaaatctt aagtgaccat tctcccctca taagatgttc
     4141 ttttgctctg tattaactta acatggatac aaactttacc tgctttattt tctttatagc
     4201 atttacttgg taggttttgg cagtaacaga aggtctacat gatgtttaca ctctgggtaa
     4261 agagccttct gccttctgca ttacagtctt ctcttatgag agatctctta aaggccttaa
     4321 cttgtctctg aacttctcct atgggttgat caacccataa gaagctacaa ttttgttaca
     4381 taagaagcga atcacagtaa gctgctctcc aattgatcgt cttaaacacg gtagttgtga
     4441 ggcttaggtt cttgggaatg ctgattattc cttcctaaaa gcagttgtat tgatatcata
     4501 gactgtagtt atgtactgaa agaagggtat cgtagcttat catagagtca atattgtgtt
     4561 gttattcgaa gtttatatcg attttgagcg ttcttctaca ttacgcatca tagtttattt
     4621 acgtgtactt cacttggcga cggacctgaa gtgtttcaat tcaattcttg gtgaacatat
     4681 aaaatgctta ctcatgtaat aattatattt attacaaaac atgtgaactt caaagtcctt
     4741 atgtacagtc cttgtgtact cattcatgtg ttagaaaaaa attagg
//
LOCUS       XR_011778871            5067 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X9, ncRNA.
ACCESSION   XR_011778871
VERSION     XR_011778871.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5067
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5067
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5067
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcaggtat tattgaatgt
     3721 ttgatgtttt attagttcat tttttgagct aaattgactg ctgaactgca tatttaaaac
     3781 tagattaatt atttccgttt aattgaaccc tattattttg ggaatgtata tataataccg
     3841 tattttgttc attgcaaaag cttctgtacc atttgaataa gtaccaagaa tctactaagg
     3901 ttaagtttaa gccatggtga caaggtgata tagtgtgaat ctttggagtt ttttaatgct
     3961 cattaaatac aaaatttatt ttctcttttt ttctattact gtcccattcc attgttttta
     4021 ttgatacaga cggtttgaag atttccggac ttggactaca atgattctat tcgtgaccat
     4081 gaagacccat aaaggaacag ccatactggc aaatatgaat caatgtgaca aacagtgctt
     4141 taatggcatc attagggctt ttactgtgag gccgcaaaca cagggcaaag gctactacca
     4201 ggtcccacag gccttagatt tggacgaaat cgtaagtttg agcaactaac aatgccgaat
     4261 ttcccagcgc attactttca gttcgtagca agtcactttt gtaagacttc atcagctacg
     4321 ttgatgatcg atcgtgtggc gacccaaatt ataatcaaac aacaaggggg tgaattaacc
     4381 tcacaaatct taagtgacca ttctcccctc ataagatgtt cttttgctct gtattaactt
     4441 aacatggata caaactttac ctgctttatt ttctttatag catttacttg gtaggttttg
     4501 gcagtaacag aaggtctaca tgatgtttac actctgggta aagagccttc tgccttctgc
     4561 attacagtct tctcttatga gagatctctt aaaggcctta acttgtctct gaacttctcc
     4621 tatgggttga tcaacccata agaagctaca attttgttac ataagaagcg aatcacagta
     4681 agctgctctc caattgatcg tcttaaacac ggtagttgtg aggcttaggt tcttgggaat
     4741 gctgattatt ccttcctaaa agcagttgta ttgatatcat agactgtagt tatgtactga
     4801 aagaagggta tcgtagctta tcatagagtc aatattgtgt tgttattcga agtttatatc
     4861 gattttgagc gttcttctac attacgcatc atagtttatt tacgtgtact tcacttggcg
     4921 acggacctga agtgtttcaa ttcaattctt ggtgaacata taaaatgctt actcatgtaa
     4981 taattatatt tattacaaaa catgtgaact tcaaagtcct tatgtacagt ccttgtgtac
     5041 tcattcatgt gttagaaaaa aattagg
//
LOCUS       XR_011778872            5123 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X10, ncRNA.
ACCESSION   XR_011778872
VERSION     XR_011778872.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5123
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5123
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5123
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac gggtttccaa ttttataaac tcacgacgta atctcttgaa
     3181 tctcatatgg agatgatgaa tctgtttaaa ggtacgaata ttacaaccta atcgtcaacg
     3241 attatgagac ctttagtcct cattctcaaa cgatttcaat atttagttat ggattaatct
     3301 gttgcaagta ttcaatgttt tatgtatcga ttaatgagtt tttgtttttg tttaattttt
     3361 attaatattg atattcatat atcgattttg tgatggatga atcttattat ttttcttctt
     3421 aaggttttgt tttttccttt tcaggttgtt ttatcaagtc ttggaaaaga tttcaaatgg
     3481 attatcaaat taaaacaggt ttttcatctg aggtccctaa atcagaagtt gcaactttga
     3541 gccataaggg ctttttatgc tcattttctg catttcgttc aggtattatt gaatgtttga
     3601 tgttttatta gttcattttt tgagctaaat tgactgctga actgcatatt taaaactaga
     3661 ttaattattt ccgtttaatt gaaccctatt attttgggaa tgtatatata ataccgtatt
     3721 ttgttcattg caaaagcttc tgtaccattt gaataagtac caagaatcta ctaaggttaa
     3781 gtttaagcca tggtgacaag gtgatatagt gtgaatcttt ggagtttttt aatgctcatt
     3841 aaatacaaaa tttattttct ctttttttct attactgtcc cattccattg tttttattga
     3901 tacagacggt ttgaagattt ccggacttgg actacaatga ttctattcgt gaccatgaag
     3961 acccataaag taaaattgta tattctgctt ttacataaga tcttttggtt gatttatact
     4021 atcacttttg gcatttcgtt tattctttaa ggctttatat gatatgatat gatatgatgc
     4081 acatggcagg atgcttatag gctgatttgc tttacaaact gataaccaat taaccccgaa
     4141 tgtttacagg gaacagccat actggcaaat atgaatcaat gtgacaaaca gtgctttaat
     4201 ggcatcatta gggcttttac tgtgaggccg caaacacagg gcaaaggcta ctaccaggtc
     4261 ccacaggcct tagatttgga cgaaatcgta agtttgagca actaacaatg ccgaatttcc
     4321 cagcgcatta ctttcagttc gtagcaagtc acttttgtaa gacttcatca gctacgttga
     4381 tgatcgatcg tgtggcgacc caaattataa tcaaacaaca agggggtgaa ttaacctcac
     4441 aaatcttaag tgaccattct cccctcataa gatgttcttt tgctctgtat taacttaaca
     4501 tggatacaaa ctttacctgc tttattttct ttatagcatt tacttggtag gttttggcag
     4561 taacagaagg tctacatgat gtttacactc tgggtaaaga gccttctgcc ttctgcatta
     4621 cagtcttctc ttatgagaga tctcttaaag gccttaactt gtctctgaac ttctcctatg
     4681 ggttgatcaa cccataagaa gctacaattt tgttacataa gaagcgaatc acagtaagct
     4741 gctctccaat tgatcgtctt aaacacggta gttgtgaggc ttaggttctt gggaatgctg
     4801 attattcctt cctaaaagca gttgtattga tatcatagac tgtagttatg tactgaaaga
     4861 agggtatcgt agcttatcat agagtcaata ttgtgttgtt attcgaagtt tatatcgatt
     4921 ttgagcgttc ttctacatta cgcatcatag tttatttacg tgtacttcac ttggcgacgg
     4981 acctgaagtg tttcaattca attcttggtg aacatataaa atgcttactc atgtaataat
     5041 tatatttatt acaaaacatg tgaacttcaa agtccttatg tacagtcctt gtgtactcat
     5101 tcatgtgtta gaaaaaaatt agg
//
LOCUS       XR_011778873            4890 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X11, ncRNA.
ACCESSION   XR_011778873
VERSION     XR_011778873.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4890
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4890
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4890
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac gggtttccaa ttttataaac tcacgacgta atctcttgaa
     3181 tctcatatgg agatgatgaa tctgtttaaa ggttgtttta tcaagtcttg gaaaagattt
     3241 caaatggatt atcaaattaa aacaggtttt tcatctgagg tccctaaatc agaagttgca
     3301 actttgagcc ataagggctt tttatgctca ttttctgcat ttcgttcagg tattattgaa
     3361 tgtttgatgt tttattagtt cattttttga gctaaattga ctgctgaact gcatatttaa
     3421 aactagatta attatttccg tttaattgaa ccctattatt ttgggaatgt atatataata
     3481 ccgtattttg ttcattgcaa aagcttctgt accatttgaa taagtaccaa gaatctacta
     3541 aggttaagtt taagccatgg tgacaaggtg atatagtgtg aatctttgga gttttttaat
     3601 gctcattaaa tacaaaattt attttctctt tttttctatt actgtcccat tccattgttt
     3661 ttattgatac agacggtttg aagatttccg gacttggact acaatgattc tattcgtgac
     3721 catgaagacc cataaagtaa aattgtatat tctgctttta cataagatct tttggttgat
     3781 ttatactatc acttttggca tttcgtttat tctttaaggc tttatatgat atgatatgat
     3841 atgatgcaca tggcaggatg cttataggct gatttgcttt acaaactgat aaccaattaa
     3901 ccccgaatgt ttacagggaa cagccatact ggcaaatatg aatcaatgtg acaaacagtg
     3961 ctttaatggc atcattaggg cttttactgt gaggccgcaa acacagggca aaggctacta
     4021 ccaggtccca caggccttag atttggacga aatcgtaagt ttgagcaact aacaatgccg
     4081 aatttcccag cgcattactt tcagttcgta gcaagtcact tttgtaagac ttcatcagct
     4141 acgttgatga tcgatcgtgt ggcgacccaa attataatca aacaacaagg gggtgaatta
     4201 acctcacaaa tcttaagtga ccattctccc ctcataagat gttcttttgc tctgtattaa
     4261 cttaacatgg atacaaactt tacctgcttt attttcttta tagcatttac ttggtaggtt
     4321 ttggcagtaa cagaaggtct acatgatgtt tacactctgg gtaaagagcc ttctgccttc
     4381 tgcattacag tcttctctta tgagagatct cttaaaggcc ttaacttgtc tctgaacttc
     4441 tcctatgggt tgatcaaccc ataagaagct acaattttgt tacataagaa gcgaatcaca
     4501 gtaagctgct ctccaattga tcgtcttaaa cacggtagtt gtgaggctta ggttcttggg
     4561 aatgctgatt attccttcct aaaagcagtt gtattgatat catagactgt agttatgtac
     4621 tgaaagaagg gtatcgtagc ttatcataga gtcaatattg tgttgttatt cgaagtttat
     4681 atcgattttg agcgttcttc tacattacgc atcatagttt atttacgtgt acttcacttg
     4741 gcgacggacc tgaagtgttt caattcaatt cttggtgaac atataaaatg cttactcatg
     4801 taataattat atttattaca aaacatgtga acttcaaagt ccttatgtac agtccttgtg
     4861 tactcattca tgtgttagaa aaaaattagg
//
LOCUS       XR_011778874            4924 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X12, ncRNA.
ACCESSION   XR_011778874
VERSION     XR_011778874.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4924
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4924
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4924
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X12"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcagacgg tttgaagatt
     3721 tccggacttg gactacaatg attctattcg tgaccatgaa gacccataaa gtaaaattgt
     3781 atattctgct tttacataag atcttttggt tgatttatac tatcactttt ggcatttcgt
     3841 ttattcttta aggctttata tgatatgata tgatatgatg cacatggcag gatgcttata
     3901 ggctgatttg ctttacaaac tgataaccaa ttaaccccga atgtttacag ggaacagcca
     3961 tactggcaaa tatgaatcaa tgtgacaaac agtgctttaa tggcatcatt agggctttta
     4021 ctgtgaggcc gcaaacacag ggcaaaggct actaccaggt cccacaggcc ttagatttgg
     4081 acgaaatcgt aagtttgagc aactaacaat gccgaatttc ccagcgcatt actttcagtt
     4141 cgtagcaagt cacttttgta agacttcatc agctacgttg atgatcgatc gtgtggcgac
     4201 ccaaattata atcaaacaac aagggggtga attaacctca caaatcttaa gtgaccattc
     4261 tcccctcata agatgttctt ttgctctgta ttaacttaac atggatacaa actttacctg
     4321 ctttattttc tttatagcat ttacttggta ggttttggca gtaacagaag gtctacatga
     4381 tgtttacact ctgggtaaag agccttctgc cttctgcatt acagtcttct cttatgagag
     4441 atctcttaaa ggccttaact tgtctctgaa cttctcctat gggttgatca acccataaga
     4501 agctacaatt ttgttacata agaagcgaat cacagtaagc tgctctccaa ttgatcgtct
     4561 taaacacggt agttgtgagg cttaggttct tgggaatgct gattattcct tcctaaaagc
     4621 agttgtattg atatcataga ctgtagttat gtactgaaag aagggtatcg tagcttatca
     4681 tagagtcaat attgtgttgt tattcgaagt ttatatcgat tttgagcgtt cttctacatt
     4741 acgcatcata gtttatttac gtgtacttca cttggcgacg gacctgaagt gtttcaattc
     4801 aattcttggt gaacatataa aatgcttact catgtaataa ttatatttat tacaaaacat
     4861 gtgaacttca aagtccttat gtacagtcct tgtgtactca ttcatgtgtt agaaaaaaat
     4921 tagg
//
LOCUS       XR_011778875            4332 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X13, ncRNA.
ACCESSION   XR_011778875
VERSION     XR_011778875.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4332
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4332
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4332
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X13"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag ggttaaaatc cttttcattc
     2161 ttcttcatca attggaacat tcaaaccgtc cctctttctc tctctctctc ttcaaaccat
     2221 caaacggtaa tcaaatgcaa ttcaatcaca attgaagatt catccgtcgc tagaattatg
     2281 gcttccaatt ccataaacag atacgttctt ttttcctttc ataaactgat gatgcaatct
     2341 gttgatttag ggtttccaat tttataaact cacgacgtaa tctcttgaat ctcatatgga
     2401 gatgatgaat ctgtttaaag gtacgaatat tacaacctaa tcgtcaacga ttatgagacc
     2461 tttagtcctc attctcaaac gatttcaata tttagttatg gattaatctg ttgcaagtat
     2521 tcaatgtttt atgtatcgat taatgagttt ttgtttttgt ttaattttta ttaatattga
     2581 tattcatata tcgattttgt gatggatgaa tcttattatt tttcttctta aggttttgtt
     2641 ttttcctttt caggttgttt tatcaagtct tggaaaagat ttcaaatgga ttatcaaatt
     2701 aaaacaggtt tttcatctga ggtccctaaa tcagaagttg caactttgag ccataagggc
     2761 tttttatgct cattttctgc atttcgttca ggtattattg aatgtttgat gttttattag
     2821 ttcatttttt gagctaaatt gactgctgaa ctgcatattt aaaactagat taattatttc
     2881 cgtttaattg aaccctatta ttttgggaat gtatatataa taccgtattt tgttcattgc
     2941 aaaagcttct gtaccatttg aataagtacc aagaatctac taaggttaag tttaagccat
     3001 ggtgacaagg tgatatagtg tgaatctttg gagtttttta atgctcatta aatacaaaat
     3061 ttattttctc tttttttcta ttactgtccc attccattgt ttttattgat acagacggtt
     3121 tgaagatttc cggacttgga ctacaatgat tctattcgtg accatgaaga cccataaagt
     3181 aaaattgtat attctgcttt tacataagat cttttggttg atttatacta tcacttttgg
     3241 catttcgttt attctttaag gctttatatg atatgatatg atatgatgca catggcagga
     3301 tgcttatagg ctgatttgct ttacaaactg ataaccaatt aaccccgaat gtttacaggg
     3361 aacagccata ctggcaaata tgaatcaatg tgacaaacag tgctttaatg gcatcattag
     3421 ggcttttact gtgaggccgc aaacacaggg caaaggctac taccaggtcc cacaggcctt
     3481 agatttggac gaaatcgtaa gtttgagcaa ctaacaatgc cgaatttccc agcgcattac
     3541 tttcagttcg tagcaagtca cttttgtaag acttcatcag ctacgttgat gatcgatcgt
     3601 gtggcgaccc aaattataat caaacaacaa gggggtgaat taacctcaca aatcttaagt
     3661 gaccattctc ccctcataag atgttctttt gctctgtatt aacttaacat ggatacaaac
     3721 tttacctgct ttattttctt tatagcattt acttggtagg ttttggcagt aacagaaggt
     3781 ctacatgatg tttacactct gggtaaagag ccttctgcct tctgcattac agtcttctct
     3841 tatgagagat ctcttaaagg ccttaacttg tctctgaact tctcctatgg gttgatcaac
     3901 ccataagaag ctacaatttt gttacataag aagcgaatca cagtaagctg ctctccaatt
     3961 gatcgtctta aacacggtag ttgtgaggct taggttcttg ggaatgctga ttattccttc
     4021 ctaaaagcag ttgtattgat atcatagact gtagttatgt actgaaagaa gggtatcgta
     4081 gcttatcata gagtcaatat tgtgttgtta ttcgaagttt atatcgattt tgagcgttct
     4141 tctacattac gcatcatagt ttatttacgt gtacttcact tggcgacgga cctgaagtgt
     4201 ttcaattcaa ttcttggtga acatataaaa tgcttactca tgtaataatt atatttatta
     4261 caaaacatgt gaacttcaaa gtccttatgt acagtccttg tgtactcatt catgtgttag
     4321 aaaaaaatta gg
//
LOCUS       XR_011778876            4744 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X14, ncRNA.
ACCESSION   XR_011778876
VERSION     XR_011778876.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4744
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4744
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4744
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X14"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcagacgg tttgaagatt
     3721 tccggacttg gactacaatg attctattcg tgaccatgaa gacccataaa ggaacagcca
     3781 tactggcaaa tatgaatcaa tgtgacaaac agtgctttaa tggcatcatt agggctttta
     3841 ctgtgaggcc gcaaacacag ggcaaaggct actaccaggt cccacaggcc ttagatttgg
     3901 acgaaatcgt aagtttgagc aactaacaat gccgaatttc ccagcgcatt actttcagtt
     3961 cgtagcaagt cacttttgta agacttcatc agctacgttg atgatcgatc gtgtggcgac
     4021 ccaaattata atcaaacaac aagggggtga attaacctca caaatcttaa gtgaccattc
     4081 tcccctcata agatgttctt ttgctctgta ttaacttaac atggatacaa actttacctg
     4141 ctttattttc tttatagcat ttacttggta ggttttggca gtaacagaag gtctacatga
     4201 tgtttacact ctgggtaaag agccttctgc cttctgcatt acagtcttct cttatgagag
     4261 atctcttaaa ggccttaact tgtctctgaa cttctcctat gggttgatca acccataaga
     4321 agctacaatt ttgttacata agaagcgaat cacagtaagc tgctctccaa ttgatcgtct
     4381 taaacacggt agttgtgagg cttaggttct tgggaatgct gattattcct tcctaaaagc
     4441 agttgtattg atatcataga ctgtagttat gtactgaaag aagggtatcg tagcttatca
     4501 tagagtcaat attgtgttgt tattcgaagt ttatatcgat tttgagcgtt cttctacatt
     4561 acgcatcata gtttatttac gtgtacttca cttggcgacg gacctgaagt gtttcaattc
     4621 aattcttggt gaacatataa aatgcttact catgtaataa ttatatttat tacaaaacat
     4681 gtgaacttca aagtccttat gtacagtcct tgtgtactca ttcatgtgtt agaaaaaaat
     4741 tagg
//
LOCUS       XR_011778877            5086 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X15, ncRNA.
ACCESSION   XR_011778877
VERSION     XR_011778877.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5086
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5086
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5086
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X15"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcaggtat tattgaatgt
     3721 ttgatgtttt attagttcat tttttgagct aaattgactg ctgaactgca tatttaaaac
     3781 tagattaatt atttccgttt aattgaaccc tattattttg ggaatgtata tataataccg
     3841 tattttgttc attgcaaaag cttctgtacc atttgaataa gtaccaagaa tctactaagg
     3901 ttaagtttaa gccatggtga caaggtgata tagtgtgaat ctttggagtt ttttaatgct
     3961 cattaaatac aaaatttatt ttctcttttt ttctattact gtcccattcc attgttttta
     4021 ttgatacaga cggtttgaag atttccggac ttggactaca atgattctat tcgtgaccat
     4081 gaagacccat aaagtaaaat tgtatattct gcttttacat aagatctttt ggttgattta
     4141 tactatcact tttggcattt cgtttattct ttaaggcttt atatgatatg atatgatatg
     4201 atgcacatgg caggatgctt ataggctgat ttgctttaca aactgataac caattaaccc
     4261 cgaatgttta cagggaacag ccatactggc aaatatgaat caatgtgaca aacagtgctt
     4321 taatggcatc attagggctt ttactgtgag gccgcaaaca cagggcaaag gctactacca
     4381 ggtcccacag gccttagatt tggacgaaat cgtaagtttg agcaactaac aatgccgaat
     4441 ttcccagcgc attactttca gttcgtagca agtcactttt gtaagacttc atcagctacg
     4501 ttgatgatcg atcgtgtggc gacccaaatt ataatcaaac aacaaggggg tgaattaacc
     4561 tcacaaatct taagtgacca ttctcccctc ataagatgtt cttttgctct gtattaactt
     4621 aacatggata caaactttac ctgctttatt ttctttatag catttacttg gtaggttttg
     4681 gcagtaacag aaggtctaca tgatgtttac actctgggta aagagccttc tgccttctgc
     4741 attacagtct tctcttatga gagatctctt aaaggcctta acttgtctct gaacttctcc
     4801 tatgggttga tcaacccata agaagctaca attttgttac ataagaagcg aatcacagtt
     4861 gttattcgaa gtttatatcg attttgagcg ttcttctaca ttacgcatca tagtttattt
     4921 acgtgtactt cacttggcga cggacctgaa gtgtttcaat tcaattcttg gtgaacatat
     4981 aaaatgctta ctcatgtaat aattatattt attacaaaac atgtgaactt caaagtcctt
     5041 atgtacagtc cttgtgtact cattcatgtg ttagaaaaaa attagg
//
LOCUS       XR_011778878            4208 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X16, ncRNA.
ACCESSION   XR_011778878
VERSION     XR_011778878.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4208
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4208
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4208
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X16"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag ggttaaaatc cttttcattc
     2161 ttcttcatca attggaacat tcaaaccgtc cctctttctc tctctctctc ttcaaaccat
     2221 caaacgggtt tccaatttta taaactcacg acgtaatctc ttgaatctca tatggagatg
     2281 atgaatctgt ttaaaggtac gaatattaca acctaatcgt caacgattat gagaccttta
     2341 gtcctcattc tcaaacgatt tcaatattta gttatggatt aatctgttgc aagtattcaa
     2401 tgttttatgt atcgattaat gagtttttgt ttttgtttaa tttttattaa tattgatatt
     2461 catatatcga ttttgtgatg gatgaatctt attatttttc ttcttaaggt tttgtttttt
     2521 ccttttcagg ttgttttatc aagtcttgga aaagatttca aatggattat caaattaaaa
     2581 caggtttttc atctgaggtc cctaaatcag aagttgcaac tttgagccat aagggctttt
     2641 tatgctcatt ttctgcattt cgttcaggta ttattgaatg tttgatgttt tattagttca
     2701 ttttttgagc taaattgact gctgaactgc atatttaaaa ctagattaat tatttccgtt
     2761 taattgaacc ctattatttt gggaatgtat atataatacc gtattttgtt cattgcaaaa
     2821 gcttctgtac catttgaata agtaccaaga atctactaag gttaagttta agccatggtg
     2881 acaaggtgat atagtgtgaa tctttggagt tttttaatgc tcattaaata caaaatttat
     2941 tttctctttt tttctattac tgtcccattc cattgttttt attgatacag acggtttgaa
     3001 gatttccgga cttggactac aatgattcta ttcgtgacca tgaagaccca taaagtaaaa
     3061 ttgtatattc tgcttttaca taagatcttt tggttgattt atactatcac ttttggcatt
     3121 tcgtttattc tttaaggctt tatatgatat gatatgatat gatgcacatg gcaggatgct
     3181 tataggctga tttgctttac aaactgataa ccaattaacc ccgaatgttt acagggaaca
     3241 gccatactgg caaatatgaa tcaatgtgac aaacagtgct ttaatggcat cattagggct
     3301 tttactgtga ggccgcaaac acagggcaaa ggctactacc aggtcccaca ggccttagat
     3361 ttggacgaaa tcgtaagttt gagcaactaa caatgccgaa tttcccagcg cattactttc
     3421 agttcgtagc aagtcacttt tgtaagactt catcagctac gttgatgatc gatcgtgtgg
     3481 cgacccaaat tataatcaaa caacaagggg gtgaattaac ctcacaaatc ttaagtgacc
     3541 attctcccct cataagatgt tcttttgctc tgtattaact taacatggat acaaacttta
     3601 cctgctttat tttctttata gcatttactt ggtaggtttt ggcagtaaca gaaggtctac
     3661 atgatgttta cactctgggt aaagagcctt ctgccttctg cattacagtc ttctcttatg
     3721 agagatctct taaaggcctt aacttgtctc tgaacttctc ctatgggttg atcaacccat
     3781 aagaagctac aattttgtta cataagaagc gaatcacagt aagctgctct ccaattgatc
     3841 gtcttaaaca cggtagttgt gaggcttagg ttcttgggaa tgctgattat tccttcctaa
     3901 aagcagttgt attgatatca tagactgtag ttatgtactg aaagaagggt atcgtagctt
     3961 atcatagagt caatattgtg ttgttattcg aagtttatat cgattttgag cgttcttcta
     4021 cattacgcat catagtttat ttacgtgtac ttcacttggc gacggacctg aagtgtttca
     4081 attcaattct tggtgaacat ataaaatgct tactcatgta ataattatat ttattacaaa
     4141 acatgtgaac ttcaaagtcc ttatgtacag tccttgtgta ctcattcatg tgttagaaaa
     4201 aaattagg
//
LOCUS       XR_011778879            5600 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X17, ncRNA.
ACCESSION   XR_011778879
VERSION     XR_011778879.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5600
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5600
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5600
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X17"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcaggtat tattgaatgt
     3721 ttgatgtttt attagttcat tttttgagct aaattgactg ctgaactgca tatttaaaac
     3781 tagattaatt atttccgttt aattgaaccc tattattttg ggaatgtata tataataccg
     3841 tattttgttc attgcaaaag cttctgtacc atttgaataa gtaccaagaa tctactaagg
     3901 ttaagtttaa gccatggtga caaggtgata tagtgtgaat ctttggagtt ttttaatgct
     3961 cattaaatac aaaatttatt ttctcttttt ttctattact gtcccattcc attgttttta
     4021 ttgatacaga cggtttgaag atttccggac ttggactaca atgattctat tcgtgaccat
     4081 gaagacccat aaagtaaaat tgtatattct gcttttacat aagatctttt ggttgattta
     4141 tactatcact tttggcattt cgtttattct ttaaggcttt atatgatatg atatgatatg
     4201 atgcacatgg caggatgctt ataggctgat ttgctttaca aactgataac caattaaccc
     4261 cgaatgttta cagggaacag ccatactggc aaatatgaat caatgtgaca aacagtgctt
     4321 taatggcatc attagggctt ttactgtgag gccgcaaaca cagggcaaag gctactacca
     4381 ggtcccacag gccttagatt tggacgaaat cgtaagtttg agcaactaac aatgccgaat
     4441 ttcccagcgc attactttca gttcgtagca agtcactttt gtaagacttc atcagctacg
     4501 ttgatgatcg atcgtgtggc gacccaaatt ataatcaaac aacaaggggg tgaattaacc
     4561 tcacaaatct taagtgacca ttctcccctc ataagatgtt cttttgctct gtattaactt
     4621 aacatggata caaactttac ctgctttatt ttctttatag catttacttg gtaggttttg
     4681 gcagtaacag aaggtctaca tgatgtttac actctgggta aagagccttc tgccttctgc
     4741 attacagtct tctcttatga gagatctctt aaaggcctta acttgtctct gaacttctcc
     4801 tatgggttga tcaacccata agaagctaca attttgttac ataagaagcg aatcacagtt
     4861 gttattcgaa gtttatatcg attttgagcg ttcttctaca ttacgaaacc caatcttaga
     4921 agatctccaa atgaaaactg aggaagactt ggataggttg tcaatgtcac acttaatact
     4981 cttaatgtaa atcaggcaga gaacattatt ctaaagcagt aattttcttt acacctattt
     5041 ttcacttaag aaagtgtgcg cttgatcaaa aaagtttata gtcattttca ttataagagt
     5101 gattgtataa tagaaaagca gtttcataag aattgtatgg gttgtggatt cattgtttgc
     5161 aatcgctctg aagaacactt ggatatgttg ttaatggcac acttaatatt gttgctgcag
     5221 aaactaaccc ctaggtaata gctctctttg tactgttgat ggtgctttaa aaaacccgtt
     5281 tgatctactt ttaagtaaat gaaacccaca gtgacccgct ttcacgttaa tgggctaaaa
     5341 atcaacatct catggaccta agaagcatac ttatacattt aacagtgttt ttaatgtttc
     5401 ttaatgtttc ctattgcagc atcatagttt atttacgtgt acttcacttg gcgacggacc
     5461 tgaagtgttt caattcaatt cttggtgaac atataaaatg cttactcatg taataattat
     5521 atttattaca aaacatgtga acttcaaagt ccttatgtac agtccttgtg tactcattca
     5581 tgtgttagaa aaaaattagg
//
LOCUS       XR_011778880            5075 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X18, ncRNA.
ACCESSION   XR_011778880
VERSION     XR_011778880.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5075
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5075
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5075
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X18"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcaggtat tattgaatgt
     3721 ttgatgtttt attagttcat tttttgagct aaattgactg ctgaactgca tatttaaaac
     3781 tagattaatt atttccgttt aattgaaccc tattattttg ggaatgtata tataataccg
     3841 tattttgttc attgcaaaag cttctgtacc atttgaataa gtaccaagaa tctactaagg
     3901 ttaagtttaa gccatggtga caaggtgata tagtgtgaat ctttggagtt ttttaatgct
     3961 cattaaatac aaaatttatt ttctcttttt ttctattact gtcccattcc attgttttta
     4021 ttgatacaga cggtttgaag atttccggac ttggactaca atgattctat tcgtgaccat
     4081 gaagacccat aaagtaaaat tggaacagcc atactggcaa atatgaatca atgtgacaaa
     4141 cagtgcttta atggcatcat tagggctttt actgtgaggc cgcaaacaca gggcaaaggc
     4201 tactaccagg tcccacaggc cttagatttg gacgaaatcg taagtttgag caactaacaa
     4261 tgccgaattt cccagcgcat tactttcagt tcgtagcaag tcacttttgt aagacttcat
     4321 cagctacgtt gatgatcgat cgtgtggcga cccaaattat aatcaaacaa caagggggtg
     4381 aattaacctc acaaatctta agtgaccatt ctcccctcat aagatgttct tttgctctgt
     4441 attaacttaa catggataca aactttacct gctttatttt ctttatagca tttacttggt
     4501 aggttttggc agtaacagaa ggtctacatg atgtttacac tctgggtaaa gagccttctg
     4561 ccttctgcat tacagtcttc tcttatgaga gatctcttaa aggccttaac ttgtctctga
     4621 acttctccta tgggttgatc aacccataag aagctacaat tttgttacat aagaagcgaa
     4681 tcacagtaag ctgctctcca attgatcgtc ttaaacacgg tagttgtgag gcttaggttc
     4741 ttgggaatgc tgattattcc ttcctaaaag cagttgtatt gatatcatag actgtagtta
     4801 tgtactgaaa gaagggtatc gtagcttatc atagagtcaa tattgtgttg ttattcgaag
     4861 tttatatcga ttttgagcgt tcttctacat tacgcatcat agtttattta cgtgtacttc
     4921 acttggcgac ggacctgaag tgtttcaatt caattcttgg tgaacatata aaatgcttac
     4981 tcatgtaata attatattta ttacaaaaca tgtgaacttc aaagtcctta tgtacagtcc
     5041 ttgtgtactc attcatgtgt tagaaaaaaa ttagg
//
LOCUS       XR_011778881            4752 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X19, ncRNA.
ACCESSION   XR_011778881
VERSION     XR_011778881.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4752
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4752
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..4752
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X19"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcagacgg tttgaagatt
     3721 tccggacttg gactacaatg attctattcg tgaccatgaa gacccataaa gtaaaattgg
     3781 aacagccata ctggcaaata tgaatcaatg tgacaaacag tgctttaatg gcatcattag
     3841 ggcttttact gtgaggccgc aaacacaggg caaaggctac taccaggtcc cacaggcctt
     3901 agatttggac gaaatcgtaa gtttgagcaa ctaacaatgc cgaatttccc agcgcattac
     3961 tttcagttcg tagcaagtca cttttgtaag acttcatcag ctacgttgat gatcgatcgt
     4021 gtggcgaccc aaattataat caaacaacaa gggggtgaat taacctcaca aatcttaagt
     4081 gaccattctc ccctcataag atgttctttt gctctgtatt aacttaacat ggatacaaac
     4141 tttacctgct ttattttctt tatagcattt acttggtagg ttttggcagt aacagaaggt
     4201 ctacatgatg tttacactct gggtaaagag ccttctgcct tctgcattac agtcttctct
     4261 tatgagagat ctcttaaagg ccttaacttg tctctgaact tctcctatgg gttgatcaac
     4321 ccataagaag ctacaatttt gttacataag aagcgaatca cagtaagctg ctctccaatt
     4381 gatcgtctta aacacggtag ttgtgaggct taggttcttg ggaatgctga ttattccttc
     4441 ctaaaagcag ttgtattgat atcatagact gtagttatgt actgaaagaa gggtatcgta
     4501 gcttatcata gagtcaatat tgtgttgtta ttcgaagttt atatcgattt tgagcgttct
     4561 tctacattac gcatcatagt ttatttacgt gtacttcact tggcgacgga cctgaagtgt
     4621 ttcaattcaa ttcttggtga acatataaaa tgcttactca tgtaataatt atatttatta
     4681 caaaacatgt gaacttcaaa gtccttatgt acagtccttg tgtactcatt catgtgttag
     4741 aaaaaaatta gg
//
LOCUS       XR_011778882            5160 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904556), transcript variant X20, ncRNA.
ACCESSION   XR_011778882
VERSION     XR_011778882.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5160
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5160
                     /gene="LOC139904556"
                     /note="uncharacterized LOC139904556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904556"
     ncRNA           1..5160
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904556"
                     /product="uncharacterized lncRNA, transcript variant X20"
                     /db_xref="GeneID:139904556"
ORIGIN      
        1 atcacatcga gttctactcc agggcttact ccgtatattt ttctctaaca aacaaaatcg
       61 ctaaattagg ttttcagttc tattcgattt gaataagata cagtcaatga attcgttcgt
      121 tatggatatg aagcagatag ggctaatcaa attgttcatc aattcaattc cgttcaaaaa
      181 taaaagctga tacgaacagt tgttgtttgg caggtaagtc tttggttgtt ggcaaagtgt
      241 gttgtgtgcc taaacatcac tgaggcaaga agctaagaga cgttcattgc aatattgtgg
      301 ccatcttaat gtttttaatg attgttgctc atctggaggg caatctagct ctccctctgg
      361 tactgctctg ctattgaagg agtaggttca tactctgctc ttggattcaa agctcttcat
      421 aatgagcata caacaagtgg taatttcttt ttcgttgttt tagcttggtt gaagtaactg
      481 gtgcattgaa ggaacttgag tttaaatcca atcactttaa ggagagttgg agaaacacaa
      541 caacatctag ttactatctt cacgtgtttg aacggtttac taaccattag tgaatgagtt
      601 caataattgt gaccaggtat tggcatgagt tcaataattt catgtttcat ctaataccca
      661 tatcaggtag gtgtatgcaa taaaagggag ccatatggtc atcttatttt atatgtcgtg
      721 aactatattc actttgatta agactgagat gttttttaat atttgatata ttttctgttg
      781 attttactta ctttgagtat gcagttttga cctgcaaatt gttttagaat ttaaaaatag
      841 tttagaaagc aattcttctc ataatgacca atataatgaa gttgctgtta tacggttttt
      901 gaataagtga aatttattta gtgttagtct taaagagctt tcaaagtggc aaaattctta
      961 tgggttcaac tgaaaaatac cttgctctgt atgtggcaat atttacccat ttgctttttt
     1021 attaagtttt catattattc ttaattgaga gtttcataat attgtatgta cattgttaat
     1081 attggattta atacagaaat aacttgtttt gagtatatag tacataaagt tttcttttgt
     1141 tagttgctga ggacataaat tatggctgaa gattcaactc cttttctgat gaggcataac
     1201 tttgtaactt tttcattgtg tcaagctttt acctttgctt gttttttttt tttatattcg
     1261 aattgtagag aatatcactt tgccaggaag agagttatac tatcaaacca ttatcgagtg
     1321 ctggaagaaa gctcccgacc ggtgtgaatc tatagagcgt gtagaacaaa acaattgcgc
     1381 actcagatca gaggttaaaa agtattcaac tgctaccttt agttagtaca cgtcttttca
     1441 tttcctgacc tcttcttcct tttcatttat atcataaaaa attagtttct tattgttctc
     1501 atatgggatt tactctatcc atgaatgaat tgaaaatact taatgaaagc ttgcctcttt
     1561 cagattttcg ttgtcgattt ccaggtatat atgttgtcta ttatttattt ttattttttg
     1621 cctatagtag ttcatagtag tggttgatta cagtgtgtgg atttaatatg tttttttcaa
     1681 aaatcattcc attcaactaa ttttggattt atgagtttca tagttttatg ttttttttaa
     1741 ctgattatga gtcgtacagt tgatgttgta atgtattgtg ctatgtagat taaggtttga
     1801 tattgattgc tgcattttgg tgttttagtg ttaagcatgt tgtaatttac aaggaaaaca
     1861 aattgtgtat gagcttagtt gttagttgat ctcagtaaca aacaagacac aaagatacat
     1921 catgcacact aatataagta ttatgttgaa ttaatttatt gttgtagaca catttatttc
     1981 tttagaggtt tctatgtgca gtgtgccgaa tatcttttaa tgtatatgcg caggctgaag
     2041 agcaaatacg ctgatgaggg aacataacta tatggcagct gtactgaatg agttctagaa
     2101 tgcaaaaatc atggcccaca caagaagttt gcaactacag gtaccatatt gatgatgtga
     2161 tttttcatga tgttcttatg gtatgacttt gatgattggt taatggtcga atgaaaaaga
     2221 taattcttgc aaaagagcaa ccatttatca atcttaaaat tttaaacata ttcacaggcc
     2281 attgcctatt ggaggtaaaa cattgagatt tgagaagtgt taaaaggttc ttttcaactg
     2341 ggttatacca cctggcactg aatgacccaa acagtgggtt ctaactgggt tggtctaaag
     2401 ggttattaca gtggctaaga ttttgagtag caggggtgga tctagaatga tgttgtttct
     2461 aattatatgg tgtttattat attggactat atgtcgaaaa aagacccatg tgcttcatca
     2521 gtcgtaatat agtgtccacg tgcatgatca tgtgagatgt gtttacattt ttaattgttt
     2581 aactaacatt aattgttgta ggttacactc tgagtgacct gttgatggaa atggaatgat
     2641 gtacactttg tatgtaaaca ttagagatgc actacaacat aataaaaaac gcaaatatcg
     2701 atgacgtaaa aactcgacta taacaaccct cacttttcca cttctgttat tactattttg
     2761 cccttaggat tttgtatgct cataaatttc tatttagcaa aacgtcgact aaatagtaaa
     2821 cttttagtcg acactcgctg ctaatttaaa aatttatgct tttctgtaaa atcgtaacta
     2881 ttaatctata tgtaaaaaaa aaatatcttc tatctatata aatcaccaca ctaattcgga
     2941 cacgtggcgc ttcctggtta ctcctcagca tttctaattt tctcagaatt ttgaattaaa
     3001 aaattcaatt tttatatatg actgacgcgt gtccgcattc aaattttcgt tttagggtta
     3061 aaatcctttt cattcttctt catcaattgg aacattcaaa ccgtccctct ttctctctct
     3121 ctctcttcaa accatcaaac ggtaatcaaa tgcaattcaa tcacaattga agattcatcc
     3181 gtcgctagaa ttatggcttc caattccata aacagatacg ttcttttttc ctttcataaa
     3241 ctgatgatgc aatctgttga tttagggttt ccaattttat aaactcacga cgtaatctct
     3301 tgaatctcat atggagatga tgaatctgtt taaaggtacg aatattacaa cctaatcgtc
     3361 aacgattatg agacctttag tcctcattct caaacgattt caatatttag ttatggatta
     3421 atctgttgca agtattcaat gttttatgta tcgattaatg agtttttgtt tttgtttaat
     3481 ttttattaat attgatattc atatatcgat tttgtgatgg atgaatctta ttatttttct
     3541 tcttaaggtt ttgttttttc cttttcaggt tgttttatca agtcttggaa aagatttcaa
     3601 atggattatc aaattaaaac aggtttttca tctgaggtcc ctaaatcaga agttgcaact
     3661 ttgagccata agggcttttt atgctcattt tctgcatttc gttcaggtat tattgaatgt
     3721 ttgatgtttt attagttcat tttttgagct aaattgactg ctgaactgca tatttaaaac
     3781 tagattaatt atttccgttt aattgaaccc tattattttg ggaatgtata tataataccg
     3841 tattttgttc attgcaaaag cttctgtacc atttgaataa gtaccaagaa tctactaagg
     3901 ttaagtttaa gccatggtga caaggtgata tagtgtgaat ctttggagtt ttttaatgct
     3961 cattaaatac aaaatttatt ttctcttttt ttctattact gtcccattcc attgttttta
     4021 ttgatacaga cggtttgaag atttccggac ttggactaca atgattctat tcgtgaccat
     4081 gaagacccat aaagtaaaat tgtatattct gcttttacat aagatctttt ggttgattta
     4141 tactatcact tttggcattt cgtttattct ttaaggcttt atatgatatg atatgatatg
     4201 atgcacatgg caggatgctt ataggctgat ttgctttaca aactgataac caattaaccc
     4261 cgaatgttta cagggaacag ccatactggc aaatatgaat caatgtgaca aacagtgctt
     4321 taatggcatc attagggctt ttactgtgag gccgcaaaca cagggcaaag gctactacca
     4381 ggtcccacag gccttagatt tggacgaaat cgtaagtttg agcaactaac aatgccgaat
     4441 ttcccagcgc attactttca gttcgtagca agtcactttt gtaagacttc atcagctacg
     4501 ttgatgatcg atcgtgtggc gacccaaatt ataatcaaac aacaaggggg tgaattaacc
     4561 tcacaaatct taacatttac ttggtaggtt ttggcagtaa cagaaggtct acatgatgtt
     4621 tacactctgg gtaaagagcc ttctgccttc tgcattacag tcttctctta tgagagatct
     4681 cttaaaggcc ttaacttgtc tctgaacttc tcctatgggt tgatcaaccc ataagaagct
     4741 acaattttgt tacataagaa gcgaatcaca gtaagctgct ctccaattga tcgtcttaaa
     4801 cacggtagtt gtgaggctta ggttcttggg aatgctgatt attccttcct aaaagcagtt
     4861 gtattgatat catagactgt agttatgtac tgaaagaagg gtatcgtagc ttatcataga
     4921 gtcaatattg tgttgttatt cgaagtttat atcgattttg agcgttcttc tacattacgc
     4981 atcatagttt atttacgtgt acttcacttg gcgacggacc tgaagtgttt caattcaatt
     5041 cttggtgaac atataaaatg cttactcatg taataattat atttattaca aaacatgtga
     5101 acttcaaagt ccttatgtac agtccttgtg tactcattca tgtgttagaa aaaaattagg
//
LOCUS       XM_071886476            1431 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase 52-like (LOC139904557), mRNA.
ACCESSION   XM_071886476
VERSION     XM_071886476.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1431
                     /gene="LOC139904557"
                     /note="serine/threonine-protein kinase 52-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139904557"
     CDS             91..1251
                     /gene="LOC139904557"
                     /codon_start=1
                     /product="serine/threonine-protein kinase 52-like"
                     /protein_id="XP_071742577.1"
                     /db_xref="GeneID:139904557"
                     /translation="MKENNSNNNSNDGFVRADQIDLKTLDEQLERHLNRAWTMEKNKN
                     KQPDFEDSVTAAAAASAITLPSKSTTRERQEWEIDPSKLLIKGILARGTFGTVHRGVY
                     DGIDVAVKLLDWGEEGHRTEAEIQSLRAAFTQEVAVWHKLDHPNVTKFIGATMGSSEL
                     NVQTENGQIGMPSNICCVVVEYLPGGALKNYLIKNRRKKLAFKVVIQMALDLARGLSY
                     LHSQKIVHRDVKTENMLLDKTRTIKIADFGVARVEASNPNDMTGETGTLGYMAPEVLN
                     GNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPDLPRCCPSSLAN
                     VMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPGDQPQGCLCFRKNRGP"
     misc_feature    355..1161
                     /gene="LOC139904557"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(355..369,379..381,412..414,418..420,532..534,
                     628..639,649..651,655..657,772..774,778..780,784..789,
                     793..795,826..828,835..837,883..894)
                     /gene="LOC139904557"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(355..369,379..381,412..414,418..420,532..534,
                     628..639,649..651,772..774,778..780,784..789,793..795,
                     826..828)
                     /gene="LOC139904557"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(367..369,649..651,655..657,772..774,778..780,
                     784..786,835..837,883..894)
                     /gene="LOC139904557"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(823..849,880..894)
                     /gene="LOC139904557"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
     polyA_site      1431
                     /gene="LOC139904557"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agagggggaa atcaatcgac ataaaccccc aatttgactc tcactttaaa acctttcttc
       61 ttcgcgtttt cacaaaattc atcacaaaat atgaaagaga acaacagcaa caataacagt
      121 aacgatggat tcgtaagagc agatcaaatc gatctcaaaa ctttagatga acaacttgaa
      181 agacatctta acagagcatg gactatggaa aagaataaga acaaacagcc ggattttgaa
      241 gattccgtca ccgccgccgc cgcagcttcc gccatcacac ttccgtcgaa atctactact
      301 agagaacgtc aggaatggga gatcgatcct tcgaagcttt taattaaagg tattttagct
      361 cgcggtactt tcggcaccgt tcaccgtggc gtctacgacg gcattgatgt cgccgttaaa
      421 ctgttggact ggggagaaga gggtcacagg acagaagccg agatacaatc tttaagggcc
      481 gcatttacgc aagaagttgc tgtttggcat aagcttgatc atcctaatgt cacaaagttc
      541 ataggtgcga caatgggttc ttctgagcta aatgttcaaa ctgaaaacgg tcaaatcggc
      601 atgccaagta atatttgttg tgtcgttgtg gaatatcttc ctgggggtgc cttaaagaat
      661 taccttatta aaaatagaag aaagaagctg gcgtttaaag tggtcattca aatggcattg
      721 gatcttgcta gaggattaag ctacctgcac tcgcaaaaga ttgtacacag agatgtgaaa
      781 actgaaaata tgctattgga caaaactaga actattaaaa tagccgattt tggagttgct
      841 cgtgttgaag cctcaaaccc taatgacatg acaggcgaaa ccggaactct tggttatatg
      901 gcccctgagg ttcttaatgg taacccgtat aataggaaat gtgatgttta tagttttggc
      961 atatgtttat gggaaatata ttgttgtgac atgccgtatc ccgaccttag tttttcagaa
     1021 gtcacttcag ctgttgttcg ccagaatttg aggccagact tacctagatg ctgtccaagt
     1081 tcacttgcga atgtaatgaa gcgatgttgg gatgcgaatc ctgataaacg gcctgagatg
     1141 gacgaggtgg tgacgatgtt ggaggccatc gacacatcta aaggaggagg tatgatccct
     1201 ggtgatcaac ctcaaggctg tctttgtttc cgtaagaatc ggggcccatg aaagttttaa
     1261 aattcgaccc ctttttggaa ccgaagatat gattaacaaa atttactaga tattggaatt
     1321 tgggatttcc taaatcttgg agtatattag atgttgtgtc tgtgctacac atttcctttg
     1381 gattatgtaa agttcttttg aattttatac aaatagttga catcttattc a
//
LOCUS       XR_011778883             450 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904558), ncRNA.
ACCESSION   XR_011778883
VERSION     XR_011778883.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..450
                     /gene="LOC139904558"
                     /note="uncharacterized LOC139904558; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904558"
     ncRNA           1..450
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904558"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904558"
ORIGIN      
        1 acatctttaa acattatctt taactatcat taaaaagacc tttcagtctg cattagacga
       61 tttttcaaca atgtagtcat gccgaaatcg tactggagaa cgatgaggct gataacggtg
      121 atggatcttt cgattccaag cctgatgcag ctcatcacat atgtgcttcc ttctttaaaa
      181 tcgattgaag tttttcacca gtagactttg gttggtacta aagcctacaa gttatggtgg
      241 ttccaaagcc cgaggtcaga cgggttcaaa tagattgcga tacgggtctt tcgagtgaat
      301 ggatgatctt gtcgagtcag ttttgtatat tactcgggcc ctttgttttg actatccgta
      361 aactaactat tgatttgttt taattttaag gtgatagctg ctacttttct aattcacctc
      421 tgtatatatc taattgtgga tagtaatggt
//
LOCUS       XM_071886477            1729 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL8 (LOC139904559), mRNA.
ACCESSION   XM_071886477
VERSION     XM_071886477.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1729
                     /gene="LOC139904559"
                     /note="probable serine/threonine-protein kinase PBL8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 168 Proteins"
                     /db_xref="GeneID:139904559"
     CDS             256..1530
                     /gene="LOC139904559"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL8"
                     /protein_id="XP_071742578.1"
                     /db_xref="GeneID:139904559"
                     /translation="MGNCGTREESAVVSDAQVKQLQVKHQVLEKKHSRSVSDLSDLST
                     PRSINVIDDLRNNSLLYTHVIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENV
                     RVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYE
                     FMFRGSLENHLFRKASAPLSWSTRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLD
                     SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVL
                     LELLTGKKSVDKTRPSKEQSLVDWARPKLNDKRKLLQIIDPRLESQYSVRGAQKACSL
                     AYYCLSQNPKARPLMSDVVETLEPLQSSSSSSNEVSISSSLMNVGRPLVMGNHSAYQM
                     HHKFVQTVGAGTGCRSANPNCSPGPSAACRVR"
     misc_feature    508..1332
                     /gene="LOC139904559"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(508..522,532..534,589..591,595..597,682..684,
                     730..741,751..753,757..759,880..882,886..888,892..897,
                     901..903,934..936,943..945,997..1008)
                     /gene="LOC139904559"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(508..522,532..534,589..591,595..597,682..684,
                     730..741,751..753,880..882,886..888,892..897,901..903,
                     934..936)
                     /gene="LOC139904559"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(520..522,751..753,757..759,880..882,886..888,
                     892..894,943..945,997..1008)
                     /gene="LOC139904559"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(931..954,985..1008)
                     /gene="LOC139904559"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     polyA_site      1729
                     /gene="LOC139904559"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatgaacgat gataacgaag aaatgaggtt gaagatagta gtctagtttg tagtcagaga
       61 cacaactgaa actgactcca ccgaccgaca ctcccctgtt tcatctcggg aatcacatcc
      121 acaaccaacc gtcaccgtca ccgtcaccgt caccgtcatt tccagctaag tcaacaacta
      181 acggagttaa tttccggcga ataatgagat acaacacgat tcgattatcc acatctcctg
      241 cattcaaaca gtattatggg taactgcggt actcgtgaag aatctgctgt cgtttctgat
      301 gctcaagtga agcaattaca ggtgaaacat caggtattag agaagaaaca tagtcggtca
      361 gtatcggatc tgagtgatct gtcaacacca cgtagtatta atgtgattga cgatttgagg
      421 aataattcct tgttatatac acatgtaatt gcctttacat tgtttgagct tgagacgatt
      481 actaaaagtt ttaggtccga ttatatttta ggggagggtg gttttggtac tgtttataaa
      541 ggttatattg atgagaatgt tagggtggga ctgaagtcat taccggttgc tgttaaggtt
      601 ttgaataaag agggtcttca agggcacaga gaatggctta cggaggttaa tttccttgga
      661 cagctcagac atccaaattt ggtgaagttg attgggtatt gttgtgaaga tgaccataga
      721 ttgcttgttt atgaatttat gtttcgtgga agccttgaaa atcatctatt tcgaaaagca
      781 agtgcaccat tatcgtggtc aacaagaatg atgattgctc ttggagcagc aaaaggactt
      841 gcttttcttc acaatgctga acgacctgta atttataggg acttcaagac ttctaacatt
      901 ttgttggact ccgattatac ggctaagtta tctgattttg ggcttgcgaa agccgggcca
      961 caaggggacg agacccatgt atcaacgaga gttatgggta cctatggata tgctgctcct
     1021 gaatatgtta tgactgggca tcttaccgca aggagtgatg tatacagctt tggggttgtt
     1081 cttttggagt tattaaccgg aaagaagtca gtggacaaaa cgagacctag caaagagcag
     1141 agcttggttg actgggcccg acccaaactg aacgacaaga gaaaattact ccaaatcata
     1201 gatccgagac tagaaagcca atattcagta aggggagctc aaaaagcttg cagcttggca
     1261 tactactgtt taagtcagaa cccaaaagca agaccactta tgagtgatgt agttgagacc
     1321 ttagagcctt tacaaagcag cagcagcagt tcaaatgagg tgtcaatatc atcatcactt
     1381 atgaatgtgg gccgccctct agtcatgggt aatcattcgg cgtatcaaat gcatcataag
     1441 tttgttcaaa ctgttggggc cggtactggg tgccgttcgg ctaacccaaa ttgctctccc
     1501 ggaccctctg cagcttgccg ggtcagatga aaaatgtgat aaatgatgca acaagtagtt
     1561 tgtaaatttt cttttcagtg tgcttattta ctaattggta cttgagatga tctgtttgta
     1621 catggtaatg gtatgatgta ggtcctgttt tgagatttgc tgtgtgtgtt aaattggttt
     1681 gagactattg tatggaaaat ctagaatatt gcctcctttt tttttagca
//
LOCUS       XR_011778884             755 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904560), ncRNA.
ACCESSION   XR_011778884
VERSION     XR_011778884.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..755
                     /gene="LOC139904560"
                     /note="uncharacterized LOC139904560; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904560"
     ncRNA           1..755
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904560"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904560"
ORIGIN      
        1 ttcaaagttt tctcctagaa gtttcaactt cgttgactat aacaacagtc ttttatatgt
       61 aaaatgatta aaataaaata aaatggtcat gtctagtttc ataagttgag aaagcatcat
      121 agtatacaaa catcaaggca agtgtcagag agtgtgttgt tgttcacatc aagattccct
      181 cattaccccc cactttctct gaccaatcta caccacataa cataaactca tccaaaaatt
      241 ctcagtttgt atttcattaa ctttattttc atggcagtca ctatacaaat gccaatcaaa
      301 cttatttact ataccctctt cttcttacta cttctcatcc acaaaacttc aggttctaca
      361 gcacagaatg catcagtact gattccggtg gggggaatcg agtacaaaat ggtaacggaa
      421 atgtacgatg gaggacgaag gaggaaactc ggcccgtttc aagtatgttt ggtttgcagg
      481 tgctgtgtta tggctactga tccaacaact tgctcaaaca taccatgttg ttttggtata
      541 gattgccagc ttccaaacaa gccctttggt gtatgtgctt ttgttcccaa gacctgtaac
      601 tgtaccactt gtgcttctcc accttaacaa ttatatattc agattcaatt ttccaaaaat
      661 aatatatatg ttattttgta catgttacag ataccaaatg cttatctttc ctagatttat
      721 cattgatata agttaaataa gaccacttaa aaata
//
LOCUS       XR_011778885             251 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904561), ncRNA.
ACCESSION   XR_011778885
VERSION     XR_011778885.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..251
                     /gene="LOC139904561"
                     /note="uncharacterized LOC139904561; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904561"
     ncRNA           1..251
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904561"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904561"
ORIGIN      
        1 gttcaagcat taaagtcgtt catcttatct ctagcttcgt tgtggtagtt gtggtacttt
       61 gctttgaagc ttgtggaggt tgaaatcgtc atctaattgt taaggttcgg ttttgaacaa
      121 gggtaagggc atcgtattgg actagagatc ccgcttgatg ctaggggacg cttttggcct
      181 tagtagctct tggagtttga ccggtagttg ggtagtttaa tcccaaacgc catgctcatt
      241 gtgtagtttg g
//
LOCUS       XM_071886478            1419 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pentatricopeptide
            repeat-containing protein At1g10330 (LOC139904562), mRNA.
ACCESSION   XM_071886478
VERSION     XM_071886478.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1419
                     /gene="LOC139904562"
                     /note="putative pentatricopeptide repeat-containing
                     protein At1g10330; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139904562"
     CDS             1..1419
                     /gene="LOC139904562"
                     /codon_start=1
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g10330"
                     /protein_id="XP_071742579.1"
                     /db_xref="GeneID:139904562"
                     /translation="MHRSPESLLQHLQHFIKNSIKIKQIHSLLITTSYLKTTPNPWTT
                     TLLYNTLIRGYLNIQNPQTTLLLFTQMLSENIPPNSHTFPSLTKAVASVASYVTTPSL
                     IDKTLYTQALKRGVLADPFVRSSFINMYARCGRLLYARKVFNEMSDPCIVSCNAMLDG
                     YCKNGDMNNAVFLFEWMSVKDVYTWTSLISGYGKVGSYKNAIRFFKRMIVESFLGDCI
                     VKPNEASYVSVLSACAGCAGIEGLLGCKQVHGYIITNGDRISAFMGAALISLYGKLGE
                     LEYAIKVFESMGKREVCTWNAMICSLASNGKEKQALDMFNKMKLKGWRPNEITFVAVL
                     TACARANLVNFGLEIFNSMLPQFGVAPIMEHYGCVVDLLGRAGLLAEAKDFVKRMPFK
                     PDGSVLGALLGACKLHGDVELGNEVAKNLVRLQPQQCGQYILLSSIYAEAEKWDHAKS
                     LRNLMVDLCIQKHPAYSIVNAM"
     misc_feature    <142..1365
                     /gene="LOC139904562"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    142..222
                     /gene="LOC139904562"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    370..444
                     /gene="LOC139904562"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    451..540
                     /gene="LOC139904562"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    544..627
                     /gene="LOC139904562"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    667..870
                     /gene="LOC139904562"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    880..963
                     /gene="LOC139904562"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    979..1071
                     /gene="LOC139904562"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1087..1167
                     /gene="LOC139904562"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgcatcgct caccagaatc cttactccaa caccttcaac atttcatcaa gaattcaatc
       61 aaaattaaac aaattcattc acttttaatc acaactagtt acctcaaaac taccccaaac
      121 ccatggacta ccacattact ttacaacacg ctaatcagag gttatctcaa catccaaaat
      181 ccacaaacca ctttactcct tttcacacaa atgctatccg aaaacatccc cccaaactcc
      241 cacactttcc cttcactaac caaagctgtt gcatctgttg cttcttatgt aacaacccct
      301 tccctcattg acaaaaccct ttacacacaa gccctgaagc gcggcgtatt agctgacccg
      361 ttcgttagat cgtcatttat taacatgtat gcgcgatgtg ggcgtttatt gtatgcacgt
      421 aaggtgttca atgaaatgtc tgacccgtgt attgtttcgt gtaatgcgat gcttgatggg
      481 tattgtaaga atggggatat gaataatgct gtttttttgt ttgagtggat gtcggtgaag
      541 gacgtttata cgtggactag tctcattagt ggatatggga aagtaggttc ttataagaac
      601 gcgattaggt tttttaaacg gatgattgtg gaaagttttt tgggtgattg tattgtgaag
      661 cctaacgaag cttcgtacgt gagtgtactt tctgcgtgtg ctggttgtgc tgggattgaa
      721 ggcttgttgg gctgtaaaca ggtacatgga tatattatca cgaatggaga tcgaataagt
      781 gcttttatgg gggcagcttt gatatcatta tatgggaaac tgggtgaatt ggagtatgcg
      841 atcaaagtgt ttgaaagcat gggaaaacgg gaagtatgta catggaatgc gatgatctgt
      901 agtcttgctt caaacggaaa agaaaagcag gcgttagaca tgtttaataa aatgaaatta
      961 aaagggtggc gtccaaatga gattactttt gttgcggttc taacagcctg tgctcgggcc
     1021 aaccttgtga acttcggttt ggaaattttt aactccatgt tgcctcaatt tggggttgct
     1081 ccaataatgg agcattatgg atgtgtggtt gatctattgg gtagagcagg gctattggcg
     1141 gaagcaaaag attttgtgaa aaggatgccg tttaaacctg atgggtctgt tttgggggct
     1201 cttttgggcg cgtgtaaact gcatggagat gttgaactag gaaatgaagt ggctaaaaac
     1261 cttgttagat tacaaccgca acaatgtggg caatatatac ttttatcgag tatatatgct
     1321 gaagcagaga aatgggatca tgctaagtca ttgaggaatt tgatggttga tttgtgtatt
     1381 caaaaacatc cagcttatag tatagttaat gcaatgtaa
//
LOCUS       XM_071886479            1932 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            5.10-like (LOC139904563), transcript variant X1, mRNA.
ACCESSION   XM_071886479
VERSION     XM_071886479.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1932
                     /gene="LOC139904563"
                     /note="protein NRT1/ PTR FAMILY 5.10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139904563"
     CDS             64..1770
                     /gene="LOC139904563"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 5.10-like isoform X1"
                     /protein_id="XP_071742580.1"
                     /db_xref="GeneID:139904563"
                     /translation="MDNTASSSSTHLTEVETPLIDSYVNGAVDYKGREVLRSKSGFWR
                     SAYFIISVEVAERFAYYGVSSNLITYLTGSLGLSTATAAENVNAWTGTASLLPLVGAF
                     IADAFLGRYLTIIFASLLYILALGLLALSTLLPYDCENVVGASSCSSHVQVTMFFVSL
                     YLVAFAQGGHKPCVQAFGADQFDANDPAECRAKSSFFNWWYFGLCAGPTVGIFVLTYI
                     QDNLSWGLGFGIPCIVMGLALLIFLLGTMTYRFAEKVEDKSAFVRIGQVFVEAARNLR
                     STRSDMFVEKDAYGVLPRQPSQQFRFLNKALLSNESGPVCSVNEVEEAKAGLRLAPIW
                     ASCLAYATVFSQTSTLFTKQGATMDRLIGSSFEIPAATLQSFIGLSIITLIPIYDTIL
                     VPLARTITKKPSGITMLQRIGTGIFISIILMVVSALVETKRLKTAREYGLLDDPVATV
                     PIKIWWLLPQYVLAGASEVFTVVGMQEFFYDQVPSELRSVGLALYLSAMGIGNFLSSF
                     LISIVEKTTGGNGEDGWISDNINRGHVDYFYYLLAGISAVAFVMYVYAAKCYVYNQGR
                     GF"
     misc_feature    190..1749
                     /gene="LOC139904563"
                     /note="NRT1/PTR family (NPF), subfamily 5 of the Major
                     Facilitator Superfamily of transporters; Region: MFS_NPF5;
                     cd17417"
                     /db_xref="CDD:340975"
     misc_feature    order(229..234,241..246,253..255,352..354,562..567,
                     571..579,586..588,664..666,673..678,685..687,1072..1074,
                     1081..1086,1093..1101,1108..1110,1204..1206,1216..1218,
                     1462..1467,1477..1479,1489..1491,1537..1539,1546..1551,
                     1558..1563,1570..1572)
                     /gene="LOC139904563"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340975"
ORIGIN      
        1 ttttcaatga aacgatagaa acggaaaaag agtaaaaaag actgatccgt atgacgctga
       61 cctatggaca acaccgccag cagtagcagt actcacttaa cagaagtcga aacgccgtta
      121 atagacagct atgtcaacgg tgccgttgac tataaaggcc gtgaagtcct ccgatcaaaa
      181 tccggtttct ggcgatcagc atattttatc atcagtgttg aggtagcaga gagatttgca
      241 tattacggag ttagttcaaa tttgatcacc tacttgaccg gatctttggg gctatcgact
      301 gcaacagccg ccgagaacgt taacgcgtgg actggaacgg cgtcgttact tccgttagtt
      361 ggtgctttca ttgctgatgc ttttcttggt cgatatttaa cgattatatt cgcttctctc
      421 ctttatattc tggcgcttgg gttgcttgct ctttcaactt tgcttcctta tgactgtgaa
      481 aatgttgtcg gtgcttcatc gtgttcttct cacgtccaag ttaccatgtt tttcgtttcg
      541 ctatatcttg tggcatttgc tcaaggtggt cacaagcctt gtgtgcaggc gtttggggct
      601 gaccaatttg atgcaaacga tccagctgaa tgcagagcca aaagttcgtt tttcaactgg
      661 tggtattttg gattatgtgc aggtccaaca gttggtatct ttgttcttac ttacatacaa
      721 gacaacctta gttggggtct tggttttgga atcccttgca tcgttatggg tttagccctg
      781 ttaatattct tgcttggaac catgacttac cgatttgcag aaaaagtcga ggataaaagt
      841 gcttttgtaa gaattggtca ggtgtttgtt gaagctgctc ggaacttgcg atctacacgt
      901 tcagacatgt ttgtggaaaa ggacgcttat ggagtgttgc cacgtcagcc ttctcagcaa
      961 ttcagatttc tcaacaaagc cttactatca aatgaaagtg ggcccgtttg cagcgtgaat
     1021 gaggttgaag aagcgaaggc aggtcttaga ctagccccaa tatgggccag ttgtttagca
     1081 tatgcaaccg tattttctca aacttccaca ttgtttacca aacaaggagc taccatggac
     1141 cgtttaatcg ggtcaagttt tgagattccg gccgccacgt tacaatcttt catcggcctc
     1201 tcaataatca ccctcattcc tatatacgac accattttgg tccccctcgc tagaaccatt
     1261 acaaagaaac catctggtat aacaatgctt caaagaattg gaaccggtat cttcatatct
     1321 attatcttaa tggtggtttc agcgctcgtt gagacaaaaa ggctcaaaac ggctcgtgag
     1381 tacgggttac tagatgatcc agtcgcaact gttccaatta agatatggtg gttattacct
     1441 cagtatgtgt tagcgggtgc ttcggaggtt tttacagttg tcggaatgca agaatttttt
     1501 tatgatcaag taccgagtga acttaggagt gttggtttag ctctttacct tagtgcaatg
     1561 ggtattggta actttttgag cagttttctt atatcgatcg ttgagaaaac gacaggcgga
     1621 aatggtgaag atggttggat atcagataac attaatagag gccatgttga ttacttttac
     1681 tatcttttgg ctgggataag tgctgttgcg tttgttatgt atgtatatgc agcgaaatgt
     1741 tacgtgtata atcaagggag aggtttttga tgttgctaaa ttatgcagaa gtgcaggtgg
     1801 tgtaatgaaa ttgtcaaaca atgtcacagg ttataatttg ttagttgtaa ttcttgacag
     1861 tttctcaccg ttgttcttca acaatgccaa cacgttgcaa agcaacgtgc agtcccaaaa
     1921 atggttcaac cc
//
LOCUS       XM_071886480            1884 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            5.10-like (LOC139904563), transcript variant X2, mRNA.
ACCESSION   XM_071886480
VERSION     XM_071886480.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1884
                     /gene="LOC139904563"
                     /note="protein NRT1/ PTR FAMILY 5.10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904563"
     CDS             64..1722
                     /gene="LOC139904563"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 5.10-like isoform X2"
                     /protein_id="XP_071742581.1"
                     /db_xref="GeneID:139904563"
                     /translation="MDNTASSSSTHLTEVETPLIDSYVNGAVDYKGREVLRSKSGFWR
                     SAYFIISVEVAERFAYYGVSSNLITYLTGSLGLSTATAAENVNAWTGTASLLPLVGAF
                     IADAFLGRYLTIIFASLLYILALGLLALSTLLPYDCENVVGASSCSSHVQVTMFFVSL
                     YLVAFAQGGHKPCVQAFGADQFDANDPAECRAKSSFFNWWYFGLCAGPTVGIFVLTYI
                     QDNLSWGLGFGIPCIVMGLALLIFLLGTMTYRFAEKVEDKSAFVRIGQVFVEAARNLR
                     STRSDMFVEKDAYGVLPRQPSQQFSVNEVEEAKAGLRLAPIWASCLAYATVFSQTSTL
                     FTKQGATMDRLIGSSFEIPAATLQSFIGLSIITLIPIYDTILVPLARTITKKPSGITM
                     LQRIGTGIFISIILMVVSALVETKRLKTAREYGLLDDPVATVPIKIWWLLPQYVLAGA
                     SEVFTVVGMQEFFYDQVPSELRSVGLALYLSAMGIGNFLSSFLISIVEKTTGGNGEDG
                     WISDNINRGHVDYFYYLLAGISAVAFVMYVYAAKCYVYNQGRGF"
     misc_feature    190..1701
                     /gene="LOC139904563"
                     /note="NRT1/PTR family (NPF), subfamily 5 of the Major
                     Facilitator Superfamily of transporters; Region: MFS_NPF5;
                     cd17417"
                     /db_xref="CDD:340975"
     misc_feature    order(229..234,241..246,253..255,352..354,562..567,
                     571..579,586..588,664..666,673..678,685..687,1024..1026,
                     1033..1038,1045..1053,1060..1062,1156..1158,1168..1170,
                     1414..1419,1429..1431,1441..1443,1489..1491,1498..1503,
                     1510..1515,1522..1524)
                     /gene="LOC139904563"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340975"
ORIGIN      
        1 ttttcaatga aacgatagaa acggaaaaag agtaaaaaag actgatccgt atgacgctga
       61 cctatggaca acaccgccag cagtagcagt actcacttaa cagaagtcga aacgccgtta
      121 atagacagct atgtcaacgg tgccgttgac tataaaggcc gtgaagtcct ccgatcaaaa
      181 tccggtttct ggcgatcagc atattttatc atcagtgttg aggtagcaga gagatttgca
      241 tattacggag ttagttcaaa tttgatcacc tacttgaccg gatctttggg gctatcgact
      301 gcaacagccg ccgagaacgt taacgcgtgg actggaacgg cgtcgttact tccgttagtt
      361 ggtgctttca ttgctgatgc ttttcttggt cgatatttaa cgattatatt cgcttctctc
      421 ctttatattc tggcgcttgg gttgcttgct ctttcaactt tgcttcctta tgactgtgaa
      481 aatgttgtcg gtgcttcatc gtgttcttct cacgtccaag ttaccatgtt tttcgtttcg
      541 ctatatcttg tggcatttgc tcaaggtggt cacaagcctt gtgtgcaggc gtttggggct
      601 gaccaatttg atgcaaacga tccagctgaa tgcagagcca aaagttcgtt tttcaactgg
      661 tggtattttg gattatgtgc aggtccaaca gttggtatct ttgttcttac ttacatacaa
      721 gacaacctta gttggggtct tggttttgga atcccttgca tcgttatggg tttagccctg
      781 ttaatattct tgcttggaac catgacttac cgatttgcag aaaaagtcga ggataaaagt
      841 gcttttgtaa gaattggtca ggtgtttgtt gaagctgctc ggaacttgcg atctacacgt
      901 tcagacatgt ttgtggaaaa ggacgcttat ggagtgttgc cacgtcagcc ttctcagcaa
      961 ttcagcgtga atgaggttga agaagcgaag gcaggtctta gactagcccc aatatgggcc
     1021 agttgtttag catatgcaac cgtattttct caaacttcca cattgtttac caaacaagga
     1081 gctaccatgg accgtttaat cgggtcaagt tttgagattc cggccgccac gttacaatct
     1141 ttcatcggcc tctcaataat caccctcatt cctatatacg acaccatttt ggtccccctc
     1201 gctagaacca ttacaaagaa accatctggt ataacaatgc ttcaaagaat tggaaccggt
     1261 atcttcatat ctattatctt aatggtggtt tcagcgctcg ttgagacaaa aaggctcaaa
     1321 acggctcgtg agtacgggtt actagatgat ccagtcgcaa ctgttccaat taagatatgg
     1381 tggttattac ctcagtatgt gttagcgggt gcttcggagg tttttacagt tgtcggaatg
     1441 caagaatttt tttatgatca agtaccgagt gaacttagga gtgttggttt agctctttac
     1501 cttagtgcaa tgggtattgg taactttttg agcagttttc ttatatcgat cgttgagaaa
     1561 acgacaggcg gaaatggtga agatggttgg atatcagata acattaatag aggccatgtt
     1621 gattactttt actatctttt ggctgggata agtgctgttg cgtttgttat gtatgtatat
     1681 gcagcgaaat gttacgtgta taatcaaggg agaggttttt gatgttgcta aattatgcag
     1741 aagtgcaggt ggtgtaatga aattgtcaaa caatgtcaca ggttataatt tgttagttgt
     1801 aattcttgac agtttctcac cgttgttctt caacaatgcc aacacgttgc aaagcaacgt
     1861 gcagtcccaa aaatggttca accc
//
LOCUS       XR_011778886             614 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904564), ncRNA.
ACCESSION   XR_011778886
VERSION     XR_011778886.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..614
                     /gene="LOC139904564"
                     /note="uncharacterized LOC139904564; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904564"
     ncRNA           1..614
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904564"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904564"
ORIGIN      
        1 gttgtcgttt caccattcaa gcaagctatg taggctccaa agaaggtgtt ctaacttatc
       61 ttagtattgt ttattatttt gctattgtta gtgtattgca gtttatataa ttcggatatt
      121 aggtgtcaaa gtgggcgacg agcagcttgt tgatggatgt atgggcaggg attgaaatca
      181 tagaaataat tgggagtaac atagtaaatg ttaccggatt gaggggctac acttgatgca
      241 aatacaaatc cttctatagc taattgaaaa agctggtgaa tgttgcagca gaagtcatac
      301 acgatctagt ggatccaagt gctaacttgt tttttggagc gctctttgtt ccatcaatag
      361 tggtcaagtt agcataactc ttatagcaac cggattcaaa cgacaagaag gtgacggatg
      421 aactgcccag gtatcaaatt ggccgtgtta ccctttacaa aatggacatg ccatttaatg
      481 tttatttttc atccagaact acatctcttt taaaagttaa gggcagtttt tgacatcatt
      541 atgcttaagg ttaccaacat gctttttccc ctttatgcga cctgtatgta ccaaacaaaa
      601 catgtgattt tttt
//
LOCUS       XR_011778887            3892 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904566), ncRNA.
ACCESSION   XR_011778887
VERSION     XR_011778887.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3892
                     /gene="LOC139904566"
                     /note="uncharacterized LOC139904566; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904566"
     ncRNA           1..3892
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904566"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904566"
ORIGIN      
        1 gttgcgaagg tcgaagttta ggagcaatgc agtaaatact tcttatgaag tggcagatga
       61 gcgaatcttg ttgctcttat gtgatggacg agtaaggatg accggtgagc cggtgatggg
      121 cttaatggtc gattaggtcg aaggttatga tgaagcgttg atattgcggt cgatgcaact
      181 attgtgtcgg attggtcact cttccccatg agagtgagca attgttgata atggttcgtt
      241 gcgtagaagg tcgggctgag atgcacgaat gatttatcgg agtgacgtat gcttagacat
      301 agagacgtat gtgggacttt ggtggagttc gatttgcgaa cggttaaggc agtcgattgt
      361 gatttgtggt atgaaggtgc gaagtcgttg cgtgtacgac atctctggta attttttatg
      421 acggctctga gagcctaaag tgaatttgca gtgattcggt gtttacgatc aatgatgaga
      481 atgatcgcgt gtgttgcgaa atggtaattc cgcggggtgt tatcatcttg gcggtgagaa
      541 tgtgaagatg aatcctaagt gggggagttt ttactgccga ggaatctccg gtggtgttag
      601 atcaagtgaa gcgtaagtct tcttgtataa ggcggtcgtg cagtaccaag tgcggtatga
      661 gaccaagtgt gaaatttgag atcacggatg tgagagaatg taactgtcat tgcgggtgct
      721 ctcgtgatgt aaaattgggt tggtgcgaaa cccggatagt gctgttgagt aggtacgagt
      781 tcgatttcgg tatggatact gtattttccc tttcgggaaa cgtgattgtg gatattgtcg
      841 gtggattatt ccactttatg gatgattgtg aggcggggag ttctatttcc gattgtctca
      901 catagagaca cgcgggtttt gtttgtttgc gagggtgcat tccctagtga tgcgacccgt
      961 tagccgcatt gaaatgtcga aaccatcctt aacggacggt ctaggttgga ggattcacct
     1021 gacattggtg aatacttttg gaggtcgcgt gacgaattgc gaattgttgg gatgataatt
     1081 cgctattgac aggattctag tacacaaatt gtttccatgc tagtgatagg aagccgtatt
     1141 gtatggatgt gttgttgggt ttaggggaga aaccctgtgt cgagtgttga tgttttgtct
     1201 aacttgtgat gtattattgt cgtcctggat taattcagag acggaaggtc gtgtgcggat
     1261 ccattcatgg gaaagtttgt atccctagtg tgattagttg gtgataccga aatttcttcg
     1321 ttgaaggaat gacccggttg tggagacgag gggagttggt tcttgaatcg gagaacattc
     1381 atgattgaac ggttgagtgt acgtttatga accggtgaag cacgaagttt taacgcgtca
     1441 tgaatccttc tcgatttgga ttaatgcaag acttgggtca cagcgtagtg gacctagtat
     1501 atcgcgttgg gtgatatagt taaggatgta gcttgttgcg agttgtagac gggagaactt
     1561 gaagggatgt taagtggtaa gtgttatccg taaggattta cttttactcg gtcttcgtcg
     1621 ttttggatgt tgaccttatt gtggaacgtg gttactcttg gcattgtacc tgtgaagggt
     1681 acaccaaagg ggtgatatct cggtacgaga ttggttgagt tcttcccgat gtgagggatt
     1741 gagcaagttt ttagtgctcg gattcgtgga tttggtaaat tgtggatgga gattaagttg
     1801 aaagggggtg attcatcgga aaggtcgctt aagtgcggtg taagatcttc gcgttgcggg
     1861 aaatttcgta gacttcaagt tcgaaagtac gtcgaaggac cataggatgt aggtccggat
     1921 gggttaagtg atgaagatca cgaggacgtg atcgagttta agtgggggag agttgtaaga
     1981 cccaaatatt tattgtacat aatgtattta tggtgtacga tgcgtgtatg aagtgtacga
     2041 gacatgtacg tgttgcttgc tcgaacgtcg aagaaaactg gacgttgttt ggagtcacta
     2101 ggtgtgtacg taccttttcg accccaaata aagtttgtgt tgatgtttca aagccttacc
     2161 attggaaaga aaatcttatt acgtttccaa cgatatttga ttcatcgaaa acggagttac
     2221 ggtcaaaaag ttatggccaa aacaagtttg ctgaagttcg gatgaaacag ggaattgtca
     2281 cggcgcgacc agaatggcca cggcgcgaca aatgcctctt ttgagggtca gaaagcttaa
     2341 aaaaagtgat ctaaaatcac cctttgggcc acggcgcgac aattttgctc cgcggcgcga
     2401 caataggcac gatctggtac ttttcagcct tttaatgagt taaatgaggg gcaaagttag
     2461 tatttcacat atggacgggt ctttggccat aaaactgatc ccaatcttat ctaaacctca
     2521 ttttcttctc atttcttccc tcccactcac accccaaacc ctagagagag agagtaaagg
     2581 gtttagagag agagctcgaa tcggagatga agaagagtga ttcgggtcgg gtctcaagag
     2641 ttaaagttgt tctcctcgtt cacggctacg ttgtgatagt gatggcaagt tctaactccg
     2701 aaattcatct ttatgatttg atattcaagt tagggttttt agctttttag ttgtaaaacc
     2761 catttagatg atgaagtggg ttatggaaac tagttatttt tgatacatgg cgggttttcg
     2821 gttgattgac gttttgacca tgattaggct ttggttttgg gtgtaatgac ttagtttagt
     2881 gattttggaa gcgttggaac ccttttgggt gtatttgagt tgactaattt tgaaatgggt
     2941 caagattagg gtttatgtgt caaaatgggt tttaagtcaa gttttggtaa atcaagtagg
     3001 taaatacttg atttaagtgt tagtggttgt cttggaaata taatcactag tcgttagtga
     3061 ttttagggcg ttttatgact ttggtcaaaa tgagcaattg gaattgggtc aaaattgagg
     3121 atgacactaa tttggattga ttggatgtta aacgcttttg ttaagtgtta aatgatgctt
     3181 ttgatgtaat tactcgcgag aagtgatttt aggttaaaat ttggtgtttt agcaataaag
     3241 tcaaacttgg tcaaccatgg aatgggtttt gtgtaaaata cgagctagta tgcgtttaga
     3301 ggttaaagtt gacatatttg ggtatttcgg gaacgcggga actagtctcg ttagttttgg
     3361 accttcgggt agcgttaaaa gtgcaaaagg gtgtattttg cacttgttgt tcatttgggc
     3421 gggtcaagag tccaaatggg gttgtatgtt gattatgtgt atacctatat gcgtattata
     3481 ggtaaaatct tgctcggttg cgtgtggtga agatttcgcg catggtttgt aatgctcgag
     3541 ttcacgcggt attgtgatta tgaagctagc tagttgtaga ctagatgctt aggagcgctt
     3601 gggctcgacg gggtagcttt tggatatttg gacgtggatg ggggatttgg tagtccccgg
     3661 gattatgatc ttggtattgg gttgagttat tgagtcttaa cccgtatttc ttgtgatcgg
     3721 gtcattatta caaatgattt tgtaaagtgt aatttgtgtg ccaagggtca tgatagattg
     3781 ttaaacgtat cattatgatg ttatgtttcg attaaaacag agttgaaaat gtattatatt
     3841 aatgggacct aactaataaa taaataaaaa atgtactccg tttttggtta aa
//
LOCUS       XM_071886481            3307 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative GTP diphosphokinase
            RSH1, chloroplastic (LOC139904567), mRNA.
ACCESSION   XM_071886481
VERSION     XM_071886481.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3307
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3307
                     /gene="LOC139904567"
                     /note="putative GTP diphosphokinase RSH1, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139904567"
     CDS             305..2938
                     /gene="LOC139904567"
                     /codon_start=1
                     /product="putative GTP diphosphokinase RSH1,
                     chloroplastic"
                     /protein_id="XP_071742582.1"
                     /db_xref="GeneID:139904567"
                     /translation="MVSAPSISVPVECVNMCKFFKGDGSGRYDCSAISCAWKAPRALT
                     GFLASTTHSSAFLHGQNYVNRYHRCEVAGKRSWLSSEVTDHFPPRKLLRSSVLLHIGY
                     RKWVVGCSLSFSSGYDELSPEILWEDLKPAITYLTCDELELVHDAFELAFEAHDGQKR
                     RSGEPFIIHPVEVAKILGELELDWESIAAGLLHDTVEDTNIVTFERIEKEFGVTVRHI
                     VEGETKVSKLGKLKCKNEIPLVQDVKAHDLRQMFLAMTEEVRVIIVKLADRLHNMRTL
                     SHMPSHKQSSIASETLQVFAPLAKLLGMYQIKSELENLSFMYTNPQDYGRIKRRVAEL
                     YNDHEKEMEEANKLLIKKIEDDQFLNLVTLKTEVRSVCKEPYSIYKSVLKSRGSISEV
                     NQIAQLRIIIKPKPGVGVGPLCSAQQICYHVLGLVHGTWTPIPRAMKDYIATPKPNGY
                     QSLHTIVIPFLYESTFRLEVQIRTEEMNLIANRGIAAHYSGKVFVKDLIRHTVSNEDR
                     NLIGKTTTLNNANVALRIGWLNAIREWQEEFVGNMSSREFVDTVTKDLLGSRVFVFTP
                     RGEIKNLPKGATVIDYAYMIHTEIGNKMVAAKVNGNLVPPLHVLANAEVVEIVTYNGL
                     SSKTAFQRHKQWLQHAKTRSARHKIMKFLREQAALSASEITADSVNEFVADTEYDSEV
                     EEVLDYSKGTQHTWEKILENVMEISSSKMVDENLFKFKNGTIKIAKVNGNPNKQLQQV
                     SLKTESQGNELSKMMLVNIPMYKEVLPSLETWLVDKVASWSNLQGHSIQWLCIVCIDR
                     KGMLADITIALADEGIGICSCAAEVDRGRGMAVILFHVDASLDDLASACSRMDLVLGV
                     LGWSTGCTWPSLLHNHQIREC"
     misc_feature    656..2875
                     /gene="LOC139904567"
                     /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal
                     transduction mechanisms, Transcription]; Region: SpoT;
                     COG0317"
                     /db_xref="CDD:440086"
     polyA_site      3307
                     /gene="LOC139904567"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttctgcgc tctacaatat acaatacatt acatgttcct cattttcatt ccaatttcaa
       61 tccaattcat ccgccataat tataaaccct aattttatcg ttacttcatc atcacttttc
      121 gctactcgat taagaaatct ttgtatctat acatccatac atcacttcat cccgttctta
      181 gctcaaaaaa atttcacaat ttatatttga atatacttaa tttatcaatt aaatcaactg
      241 aattccgatt tttatatacg tttttctgat gcgctgttca attcgatgag attattaatt
      301 agatatggtt tctgcaccat caatttcagt gccagtggaa tgtgtgaata tgtgcaagtt
      361 ttttaaagga gatggaagtg gaagatatga ttgtagtgcg atttcgtgtg cgtggaaagc
      421 gcctagggca ttaactggat ttctagcaag tactactcac tcatctgcat ttttgcatgg
      481 tcaaaattat gtcaatagat atcatagatg tgaagttgct ggtaagagat cctggttatc
      541 ttctgaagtt acagaccatt ttcctccaag aaaactttta aggtcgagtg tacttcttca
      601 tattggctac agaaaatggg tagtgggttg ttccttatct ttctcttcag gatatgatga
      661 gctctcccct gaaattttgt gggaggatct caaaccagct ataacatacc ttacatgtga
      721 tgagttagag ttagtgcatg atgcttttga actggccttt gaggcacatg atgggcaaaa
      781 acgacgcagt ggagaacctt ttatcattca ccctgtcgaa gtcgctaaaa ttctcggaga
      841 gctagagtta gactgggagt caatagctgc tggcttatta catgatacgg ttgaagatac
      901 caatattgtt acctttgaaa gaatagagaa ggaatttggt gtcacagttc gtcacattgt
      961 tgaaggagaa acaaaggtgt ctaaacttgg aaagttgaag tgtaaaaatg aaatcccttt
     1021 ggtacaagat gtgaaagcac atgatcttcg acaaatgttt ctagctatga cagaggaggt
     1081 acgggtgatt attgtcaagt tagcagacag attacacaat atgcgcactc tttcacatat
     1141 gccttcacat aagcagtcca gcattgcatc ggagacccta caagtttttg cacctctagc
     1201 aaagctactg gggatgtacc agattaagtc tgagcttgag aatttatcat ttatgtacac
     1261 aaatcctcaa gattacggta gaatcaagag acgggtagca gaactctata atgatcacga
     1321 gaaagaaatg gaagaggcaa ataaactatt gatcaagaag attgaagatg accaatttct
     1381 aaaccttgtg actctgaaga ctgaggttcg atcagtatgc aaggaacctt acagcatcta
     1441 taaatctgta ctcaaatccc gaggttcaat tagtgaagtt aaccaaattg cccagcttcg
     1501 cattattatt aaacccaagc caggtgttgg tgttgggcct ttgtgtagtg cacaacagat
     1561 atgctatcac gtacttgggc tggttcacgg gacctggacc cccatacctc gagctatgaa
     1621 agactacatt gcaactccaa aacctaatgg ctatcagagt cttcatacta ttgtaattcc
     1681 ctttctttac gagagtacat ttcgcctaga agttcagatt agaacggaag agatgaactt
     1741 gattgcaaat agaggcattg ctgctcatta tagtgggaaa gtttttgtta aagacttaat
     1801 cagacataca gtttctaacg aagaccgaaa cttgatagga aaaacaacca ctcttaacaa
     1861 tgcaaatgtg gcactcagga ttggttggtt gaatgcaatt agagaatggc aagaggagtt
     1921 tgttggtaac atgagttcta gagagtttgt agatacagtt accaaggatc ttcttggtag
     1981 ccgtgtattt gtgtttactc cccgaggaga gataaaaaat ctgcctaagg gagcaaccgt
     2041 cattgattat gcttatatga tacatactga aattggaaat aagatggtgg ctgcaaaggt
     2101 taatggcaat cttgtgcctc ccttgcatgt gcttgcaaac gctgaagttg tggagattgt
     2161 gacttacaat ggattatcaa gcaaaactgc tttccagagg cacaaacaat ggctacagca
     2221 tgccaaaaca cgtagtgcta gacacaagat aatgaagttt ttgagggagc aagctgcact
     2281 atctgcatct gaaatcacag ccgattcggt taacgagttt gttgcagata ccgaatatga
     2341 tagtgaagtt gaagaggtat tagattactc taaagggacc caacatacat gggagaagat
     2401 tctcgaaaat gtcatggaaa tatcatcttc aaagatggtt gatgaaaatc tttttaagtt
     2461 taaaaacggg actattaaaa ttgctaaagt gaatggcaat cctaataagc aattgcagca
     2521 agtgagttta aaaaccgagt cgcagggaaa cgagcttagt aagatgatgc ttgtgaatat
     2581 tcctatgtat aaggaagtac tacccagttt agaaacctgg cttgttgaca aggtggcatc
     2641 ttggagcaac cttcaaggac actcgatcca atggttatgc atcgtctgta tagatcggaa
     2701 aggaatgctg gctgatatca caattgcatt ggctgatgaa ggcattggaa tatgctcatg
     2761 tgctgctgag gttgatagag gaagaggaat ggctgtcata ctttttcatg ttgatgcaag
     2821 tttggacgat ttggcgagtg cgtgttcacg aatggatctg gtccttggtg tgttgggatg
     2881 gtccacaggg tgtacttggc ctagtttatt gcataatcat cagattcgag aatgttaatt
     2941 gaaagatgag gttcagaggc agcgtaacaa gttttgtcgg ttcagaataa acacaattct
     3001 ttatctagtt gtatctagtt atcattatgt atatttgttg cacaatcatg atcagaataa
     3061 agtagcagca gcagcagcat atatttaagg gggactgtat ataaaagaga ataccataga
     3121 tgtaatctgc actttgtaaa cataaaatag tgagatatat acacaagtgt tttaggttaa
     3181 agatattagt taccaccatg tcatgtatat ctgttataca agatatcggt tttgtgtcag
     3241 ttgcatcgta tttgtaagat aatacaaggt acagggtaat ttattcattt aggataaact
     3301 tgtatga
//
LOCUS       XM_071886483            1965 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904568), mRNA.
ACCESSION   XM_071886483
VERSION     XM_071886483.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1965
                     /gene="LOC139904568"
                     /note="uncharacterized LOC139904568; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904568"
     CDS             83..1786
                     /gene="LOC139904568"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742584.1"
                     /db_xref="GeneID:139904568"
                     /translation="MEQSRAHDPKKNTKTIPVALNIGAGAGSFGISGIVLLGGALVAT
                     TVVSVLAFKRRKQHQSSSENISPSDDVTSMKEMESKTIQHLTKDEKHNSGSGKEEADS
                     EDSNEDGIHSMVGEGQEDTSVDDSYEKVVLECEEQVVMKVQIEEDSCLEIDDGCEEQE
                     YSMMIDDEKDGSVDASLLVNDETISSIEEYQVIEAPLRDNVAKESEKEEEEKEEDYEK
                     VFINEEAATEDGCLNHVKVNDNSQEQFPEEEKEKNNHDETFLENYVGDLSDETGYAEQ
                     LVHVMEEEAIDTTRAKQTEIQNHSQMNTEDILEMADDDEFVLDAQEVLQVNKDCETLD
                     VPCITDNLNEAVDDQITRKEDDSLSQLNNTEKKGEDTAAHEVKEQVIIEDDMLLPLAQ
                     PIEETEIDDQTVKIQDKPPTQLVNEEKEDVTDVQVEAEMNTEEDESVRKERISKEDEV
                     PSVTLIDDDVKVMSSNKSSDELEDNFGRILGRVVRSTSYRNGIIKDDKGSKSPSKKQV
                     LLVSEPWNLKLMTWSLLVSIWCLCHWYSELPYPQLSLVGSLLFVLILLGCYRNRTTYL
                     V"
     misc_feature    <743..>1507
                     /gene="LOC139904568"
                     /note="GTP-binding protein required for 40S ribosome
                     biogenesis [Translation, ribosomal structure and
                     biogenesis]; Region: BMS1; COG5192"
                     /db_xref="CDD:227519"
ORIGIN      
        1 accacctccg ttgaacaaaa ataaacaaac acaccacttt caagaatcac aaaaagattc
       61 actttccacc cacaaaacca gtatggaaca atctcgggca catgacccaa aaaagaacac
      121 taaaaccatt ccggtggcac taaatatagg cgccggtgcc ggcagttttg gcattagcgg
      181 aattgtgtta ttgggtggag ctttggttgc tacaaccgta gtatcagtct tagcattcaa
      241 aagaagaaaa caacatcaat catcatcgga aaatatttct ccaagtgatg atgtgaccag
      301 catgaaggag atggagtcta aaactattca acacttaact aaggacgaaa aacataattc
      361 tggaagcggt aaagaagaag cggactctga ggatagtaat gaagatggta tacattcaat
      421 ggttggcgaa ggtcaagaag atacatcagt tgacgatagt tatgaaaagg tagtgttgga
      481 gtgtgaagaa caagtagtaa tgaaagttca aattgaagaa gattcgtgtt tagagataga
      541 tgacggttgt gaggagcaag aatactcgat gatgattgat gatgaaaaag atggaagtgt
      601 tgatgcatcg ttgttagtaa atgatgaaac tatttcatca atagaagaat accaagtgat
      661 tgaggcacct ctaagagata atgttgccaa agaatcagaa aaagaagaag aagaaaaaga
      721 agaagattat gagaaagtat tcataaatga ggaggcagcg actgaagatg gttgtttgaa
      781 tcatgttaaa gtaaacgaca actctcaaga gcagtttcct gaagaagaga aagaaaaaaa
      841 caatcatgac gaaacttttt tggagaatta tgtaggagac ctgagtgatg aaacaggtta
      901 tgcggaacag cttgtccatg tgatggaaga agaagcaatt gatacaactc gtgcgaaaca
      961 gactgaaata caaaaccact ctcaaatgaa tacggaagac attttagaga tggctgatga
     1021 tgatgaattt gtactagatg cccaagaagt gctgcaggtg aataaagatt gtgaaacgct
     1081 tgatgttcca tgtatcaccg acaatctcaa tgaggctgtt gatgatcaga taacacgaaa
     1141 agaagacgac tcattaagcc aactgaataa tacagaaaag aaaggtgaag atacagcagc
     1201 acatgaagtc aaagaacaag tgattattga agatgatatg ttattgccgc ttgctcaacc
     1261 aattgaagaa actgaaattg atgatcagac ggtaaaaata caagacaaac cacctacaca
     1321 gttggtgaat gaagaaaaag aggacgtaac agatgtgcaa gtcgaagcag agatgaatac
     1381 agaagaagac gaatccgtca gaaaagagag aataagcaag gaagatgaag tcccaagtgt
     1441 aacattaatt gacgacgatg ttaaagtgat gagtagtaac aaaagttcag atgaattaga
     1501 agataacttt gggagaattt taggcagggt ggtgcggagc actagttacc gaaatggaat
     1561 tataaaagac gacaagggta gcaaaagtcc atcgaaaaaa caagtactac tagtaagtga
     1621 gccatggaat cttaaactga tgacatggtc cttattggtg tcaatatggt gcttgtgcca
     1681 ttggtattct gagctgccct acccacaact tagtcttgtg ggtagtttgt tatttgtttt
     1741 gatcttatta ggctgctacc ggaaccgtac tacatacttg gtctaacatg agatgaaata
     1801 ccatgcattt ctattgtttc tggtttcttg tctaagctta cattgggatt aagggaatta
     1861 tgtaccgccc aatgcctaaa tcagttgtat gtaatatgat catcgtcata caagtttatc
     1921 ctaaatgaat aaattaccct gtaccttgta ttatcttaca aatac
//
LOCUS       XM_071886484             546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904569), mRNA.
ACCESSION   XM_071886484
VERSION     XM_071886484.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139904569"
                     /note="uncharacterized LOC139904569; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904569"
     CDS             1..546
                     /gene="LOC139904569"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742585.1"
                     /db_xref="GeneID:139904569"
                     /translation="MELKNIEITPSQDLVCTNESDFEQENRTYSCTFCKRGFSNAQAL
                     GGHMNVHRKDRAKLQESIQETLITKQTTKGINLMDHADLKSSSDEKSDGVPKRPWTCT
                     EEINSPESPRKKDRGVHVNNFKKPSLQLSLRIESSLTSDMSSIISNRTSFSSSSPTEL
                     DLELRLGTDSHVTSRDHVILE"
     misc_feature    85..159
                     /gene="LOC139904569"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 atggaactaa aaaacattga aattacacct tcccaagatc tagtatgcac caacgagagc
       61 gatttcgaac aagaaaatcg gacttactca tgtactttct gcaaaagagg cttctcgaat
      121 gcacaagcgt taggtggtca catgaatgtc cacagaaaag atagggctaa gttacaagaa
      181 tcgatccaag aaaccctaat tacaaaacaa actacaaagg gtattaactt gatggatcac
      241 gctgatttga agtcgtcaag cgatgagaaa agtgatggtg taccgaaaag gccatggact
      301 tgtacagaag agataaatag ccccgaaagc cctagaaaga aagatcgcgg tgtacatgtc
      361 aataacttta agaaaccatc attgcaactt tcgttgcgta ttgaatcatc gttgacaagt
      421 gatatgtcta gtatcatatc aaacaggact tctttttcat cttcgtcgcc aacagaactg
      481 gaccttgagc ttcggttagg aacggattct catgtaacat ctagggacca tgtgatacta
      541 gaatag
//
LOCUS       XR_011778888             702 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904570), ncRNA.
ACCESSION   XR_011778888
VERSION     XR_011778888.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139904570"
                     /note="uncharacterized LOC139904570; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904570"
     ncRNA           1..702
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904570"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904570"
ORIGIN      
        1 tttataatat atgtgttgtt gcagagaaat accccattct gagcatcaat ctgaaggcca
       61 aaacattgag gaacttcggt cgggtatgct gcttactgag tccgaagcca aaattgaagc
      121 cgaactccta gcccatagaa gagcccaagc ccaagcccaa gccttggatc aatcgtttgc
      181 ccaatcccga gcactaactc aagccttgtc caaacaagcc ctggatcagg cccaacagaa
      241 agcccaggct gatgctgaag ctgaggcccc cttgtaagaa agaacattac agtgaatatg
      301 ttaatgtttc ttgcttattg tggtgttgtg ctcttgtccc gtccgggttt tagtgaagat
      361 tcgccttttc ttgtcaagct aatgactttc ctctttgatt gtggtgtgtt ttctcttttc
      421 tacgtttgct gggatattgc ggtttctgaa aaaacattct ttgatcggat taagtctgga
      481 tttgataagt tgaagaagga ccgtctgagc aagaatggga tgactgctga ggttggttat
      541 cgtcttctag atgatcaagt ttagaatatg aacctttaca tcatagaatt caaagtatgt
      601 gcagaataag ttctagacaa tacatttgaa tgattggaaa attttgttaa gctcgttagt
      661 agcgcacttt agaatttgta cttgagtaca tgttctcttt gt
//
LOCUS       XM_071886485            1577 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904571), transcript variant X1, mRNA.
ACCESSION   XM_071886485
VERSION     XM_071886485.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1577
                     /gene="LOC139904571"
                     /note="uncharacterized LOC139904571; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139904571"
     CDS             174..1415
                     /gene="LOC139904571"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742586.1"
                     /db_xref="GeneID:139904571"
                     /translation="MWAAGCLASCCASCACSACQSVVSGISRRSARIAYCGLFALSLI
                     VAWIFREVAAPLMEKIPWINHFYETPDREWFETDAVLRVSLGNFLFFLILSLIMVGVK
                     NQKDPRDSLHHGGWMMKVICWCLLVILMFFVPNEIISFYESTSKIGSGLFLLVQVVLL
                     LDFVHSWNDKWVAYDEQFWYAALLVVSLVCYVATFSFSGLLFYLFTPSGQDCGLNTFF
                     IVMTLILVFVFAIITLHPTVSGSILPASVISLYCMYLCYSGLVSEPRDYACNGLHKHS
                     KAVNTGTLTVGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRAGGEKPLLPLDKRDEHEE
                     KENNKPVSYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGRLVDVGWPSVWVRIITSW
                     ATAGLFIWSMVAPHLFPDREF"
     misc_feature    243..1406
                     /gene="LOC139904571"
                     /note="Serine incorporator (Serinc); Region: Serinc;
                     pfam03348"
                     /db_xref="CDD:460891"
ORIGIN      
        1 gcatattctt ttctaacaga atttcagata agaaaatact tttaaaagcc cttgtgaaag
       61 ctatatcgta attttacccg atcatcattt taaatttata atcatcgtta ttcttcattc
      121 gatcgcaatc ggttttaggg agtattgata attgataaag cagaaagaga aaaatgtggg
      181 cagctggttg cctggcttct tgctgtgcat cctgcgcatg cagtgcgtgc caatcggtgg
      241 tgtcggggat tagtcgtcgg tctgctcgta ttgcatactg tggtcttttt gctctttctc
      301 tgattgtggc ttggatattt agagaagttg ctgcaccact gatggagaag atcccgtgga
      361 ttaatcactt ttatgaaaca cccgataggg agtggttcga gactgatgct gtcttgcgag
      421 ttagtttggg gaacttcttg tttttcttaa ttctttctct tataatggtt ggggtgaaaa
      481 atcaaaaaga cccacgtgat agtttgcacc atggtggatg gatgatgaaa gtcatttgtt
      541 ggtgtcttct cgttatcctt atgtttttcg tcccaaatga gataatcagc ttttatgagt
      601 cgacatcgaa aattggctcc gggttatttc tccttgtcca ggttgtgctc ttgttggact
      661 ttgtccatag ttggaatgac aaatgggttg catatgatga gcagttctgg tatgcagcct
      721 tgcttgtcgt ctcacttgtg tgttatgttg caacattctc gttctcggga cttctgttct
      781 atttgtttac tccatctgga caggactgtg gcctcaatac tttctttatt gtgatgactc
      841 tcattcttgt gttcgtgttt gctattatca ctttgcatcc tacagtgagt gggagcattc
      901 tgccagcatc tgttatttca ttgtactgca tgtatctttg ctatagtgga cttgtaagtg
      961 aaccaaggga ttatgcttgc aatggtctcc acaagcattc aaaagctgtt aacaccggca
     1021 cacttactgt tgggttgctc acaactgtcc tctcagttgt ttactctgct gtccgagctg
     1081 gatcttctac tactttgctt tcccctcccg actcacctcg tgcaggtggt gaaaaaccac
     1141 ttctaccctt ggacaaaaga gacgaacatg aagagaaaga aaacaataaa cctgtttcat
     1201 attcgtattc tttcttccac attatcttct cccttgccag catgtactcc gcaatgcttc
     1261 ttacagggtg gtcaacttcg gttggggaaa gtggcaggtt ggtcgatgtt ggatggccat
     1321 cagtgtgggt ccgtattata acttcatggg caactgcagg tttgttcatt tggtcaatgg
     1381 ttgcacctca tctatttccg gatagggaat tttaagccaa attggaaatt tacactgttg
     1441 gaggttctta gtaatgcagt agtaaatatg tatgtatttg attgcttttc tattgttatt
     1501 gtatggatta tgcttgaagt ccgttttcta atattcgtgt gtgaataaat atcttaaaat
     1561 ttaatgaact tgcttgt
//
LOCUS       XM_071886486            1599 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904571), transcript variant X2, mRNA.
ACCESSION   XM_071886486
VERSION     XM_071886486.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1599
                     /gene="LOC139904571"
                     /note="uncharacterized LOC139904571; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139904571"
     CDS             196..1437
                     /gene="LOC139904571"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742587.1"
                     /db_xref="GeneID:139904571"
                     /translation="MWAAGCLASCCASCACSACQSVVSGISRRSARIAYCGLFALSLI
                     VAWIFREVAAPLMEKIPWINHFYETPDREWFETDAVLRVSLGNFLFFLILSLIMVGVK
                     NQKDPRDSLHHGGWMMKVICWCLLVILMFFVPNEIISFYESTSKIGSGLFLLVQVVLL
                     LDFVHSWNDKWVAYDEQFWYAALLVVSLVCYVATFSFSGLLFYLFTPSGQDCGLNTFF
                     IVMTLILVFVFAIITLHPTVSGSILPASVISLYCMYLCYSGLVSEPRDYACNGLHKHS
                     KAVNTGTLTVGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRAGGEKPLLPLDKRDEHEE
                     KENNKPVSYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGRLVDVGWPSVWVRIITSW
                     ATAGLFIWSMVAPHLFPDREF"
     misc_feature    265..1428
                     /gene="LOC139904571"
                     /note="Serine incorporator (Serinc); Region: Serinc;
                     pfam03348"
                     /db_xref="CDD:460891"
ORIGIN      
        1 ccgatcatca ttttaaattt ataatcatcg ttattcttca ttcgatcgca atcggctcgt
       61 gtattgtgta ggcagacgtt tgagacatat ttgtgcgtcg ttgaggtgct gcaattatga
      121 ttcaacattt gattggtctt ttgattttga agtgttttag ggagtattga taattgataa
      181 agcagaaaga gaaaaatgtg ggcagctggt tgcctggctt cttgctgtgc atcctgcgca
      241 tgcagtgcgt gccaatcggt ggtgtcgggg attagtcgtc ggtctgctcg tattgcatac
      301 tgtggtcttt ttgctctttc tctgattgtg gcttggatat ttagagaagt tgctgcacca
      361 ctgatggaga agatcccgtg gattaatcac ttttatgaaa cacccgatag ggagtggttc
      421 gagactgatg ctgtcttgcg agttagtttg gggaacttct tgtttttctt aattctttct
      481 cttataatgg ttggggtgaa aaatcaaaaa gacccacgtg atagtttgca ccatggtgga
      541 tggatgatga aagtcatttg ttggtgtctt ctcgttatcc ttatgttttt cgtcccaaat
      601 gagataatca gcttttatga gtcgacatcg aaaattggct ccgggttatt tctccttgtc
      661 caggttgtgc tcttgttgga ctttgtccat agttggaatg acaaatgggt tgcatatgat
      721 gagcagttct ggtatgcagc cttgcttgtc gtctcacttg tgtgttatgt tgcaacattc
      781 tcgttctcgg gacttctgtt ctatttgttt actccatctg gacaggactg tggcctcaat
      841 actttcttta ttgtgatgac tctcattctt gtgttcgtgt ttgctattat cactttgcat
      901 cctacagtga gtgggagcat tctgccagca tctgttattt cattgtactg catgtatctt
      961 tgctatagtg gacttgtaag tgaaccaagg gattatgctt gcaatggtct ccacaagcat
     1021 tcaaaagctg ttaacaccgg cacacttact gttgggttgc tcacaactgt cctctcagtt
     1081 gtttactctg ctgtccgagc tggatcttct actactttgc tttcccctcc cgactcacct
     1141 cgtgcaggtg gtgaaaaacc acttctaccc ttggacaaaa gagacgaaca tgaagagaaa
     1201 gaaaacaata aacctgtttc atattcgtat tctttcttcc acattatctt ctcccttgcc
     1261 agcatgtact ccgcaatgct tcttacaggg tggtcaactt cggttgggga aagtggcagg
     1321 ttggtcgatg ttggatggcc atcagtgtgg gtccgtatta taacttcatg ggcaactgca
     1381 ggtttgttca tttggtcaat ggttgcacct catctatttc cggataggga attttaagcc
     1441 aaattggaaa tttacactgt tggaggttct tagtaatgca gtagtaaata tgtatgtatt
     1501 tgattgcttt tctattgtta ttgtatggat tatgcttgaa gtccgttttc taatattcgt
     1561 gtgtgaataa atatcttaaa atttaatgaa cttgcttgt
//
LOCUS       XM_071886487            2186 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glyoxysomal fatty acid
            beta-oxidation multifunctional protein MFP-a-like (LOC139904572),
            mRNA.
ACCESSION   XM_071886487
VERSION     XM_071886487.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2186
                     /gene="LOC139904572"
                     /note="glyoxysomal fatty acid beta-oxidation
                     multifunctional protein MFP-a-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904572"
     CDS             62..2008
                     /gene="LOC139904572"
                     /codon_start=1
                     /product="glyoxysomal fatty acid beta-oxidation
                     multifunctional protein MFP-a-like"
                     /protein_id="XP_071742588.1"
                     /db_xref="GeneID:139904572"
                     /translation="MANKSKTQMVVSDNGVAIITINNPPLNLLSSSVLYSLKGSIEEA
                     LQRDEVKAIVITGSAGKFCGGADVAVFGNPQMVKKDNEIAFMSIEVITDLLEGARKPL
                     VAAIDGFAFGGGLEIALACHARISTPTSQLGLTELQYGIIPGFGGSQRLPRLVGLPKA
                     LEMILMSKRINGMEAFRVALVDVLSPADELIRTASNWALDILDCRKPWIISLYKTDKL
                     QPLKEARLILNTARARVKKHNPNLVHPLICIDVIEEGIVSGPRNGLLKEAHALNELQE
                     SVTCKSLVHIFFARFNTSKIPGITDTGLQPRKINKVGVIGGGGIFGSEIATAFILGNI
                     KVLLKEDHQNLLMTSIGKIKANLQQTHLLTKQKLEKAAASLLKGVVDYDSFKDVDLVV
                     ETSEGSVELKQKIFADLERYCPQHCIFATNSSTIDIQQLIVERTKSKSRIVGTHFYSP
                     SPLLEIVRTDSNPPQVIVDVLNLAKKMKKTPILVKGHAVNRMSDVYFRAASFVAQQFE
                     EKYQIEQVMQKFGIGIRLFRTMDHIQLVDTMHKNREQSLSEEEILHIIMFPVVNEACR
                     ILEQKIVVKASDIDVVSVLAMGFPSYRGGIIYWANNTIGYKYIHSRLETWASKYGEFF
                     KPCAYLKEQSLLGTTKNTQIKSQM"
     misc_feature    62..1978
                     /gene="LOC139904572"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     Region: fadJ; PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 actcccttcc gcttatgttt ttataacaga aagcgaagcg ataacaaatt atcatagttt
       61 aatggcgaac aaaagcaaaa cccaaatggt agttagtgac aacggtgtcg ctatcatcac
      121 aatcaataat ccgcctctca atttactatc ttcgtctgtg ctttatagct taaaaggcag
      181 cattgaagaa gctttgcaac gtgatgaggt taaagcaatc gtcataaccg gttctgcagg
      241 aaagttctgt gggggagctg atgtggcagt tttcggaaat cctcaaatgg taaaaaaaga
      301 caacgagatt gcgtttatgt caatagaggt aatcactgac cttttggaag gtgcaagaaa
      361 gcctttagtt gcagccatag atggttttgc atttggtggt ggactagaaa tagcactggc
      421 atgtcatgca cgcatatcga cacctacctc gcaacttggc ttgacagaat tgcaatatgg
      481 gatcattcct gggtttggag gcagtcaacg tcttccacgg cttgttggcc ttcctaaagc
      541 tctggagatg attctgatgt caaaacgaat aaacgggatg gaagcttttc gtgtggcact
      601 tgttgatgtc ctatctcccg ctgacgagtt aatcagaaca gcatctaact gggccttgga
      661 tatattagac tgtcgaaaac catggatcat cagcctttac aaaaccgaca aattacaacc
      721 attaaaagaa gcaagactaa tacttaacac agcaagagcc cgtgttaaaa aacataaccc
      781 gaatcttgtt catcccttga tttgcatcga tgtcattgaa gagggtatag tttccggccc
      841 tcgtaatgga ctattgaagg aagcacatgc ccttaatgaa cttcaagaat ctgtaacttg
      901 caaaagtttg gtccacatct tctttgctcg atttaatact tcaaagatcc ctggtataac
      961 tgatacaggg ttgcagccta ggaaaataaa taaagttggt gttattggtg gtggtggtat
     1021 atttggttct gaaatagcaa cagcttttat tctcggtaat attaaagtac tacttaagga
     1081 agatcatcag aatttgttga tgacttcaat tggtaaaatc aaagctaatt tacaacagac
     1141 ccatcttttg acgaaacaga aacttgaaaa ggctgctgca tctcttttga aaggtgtagt
     1201 tgattatgat agcttcaaag atgtggattt agttgtagag acatcagagg gaagcgtcga
     1261 gttaaaacag aaaatatttg ctgatcttga acgctattgt cctcaacatt gcatttttgc
     1321 aaccaatagt tccacaattg acatacaaca actaattgtg gagagaacaa aatccaaatc
     1381 ccggattgtt ggtacccact tttacagccc ttctccgctc ttggaaatag tccgtaccga
     1441 ttcgaatcct ccccaagtaa ttgtcgatgt acttaatctg gcaaagaaga tgaagaaaac
     1501 accgattttg gtcaagggac atgcggttaa caggatgtct gatgtgtatt ttcgagcagc
     1561 atcgtttgtt gctcaacaat ttgaagagaa ataccaaatt gagcaagtta tgcaaaaatt
     1621 tggaattggc atacgtcttt tcaggacaat ggatcatatc caattagtcg ataccatgca
     1681 taagaatcgt gaacaaagct tgtcagaaga agaaatactg catattatta tgtttcccgt
     1741 tgtaaacgag gcttgtcgca ttttggaaca aaaaattgta gtcaaggctt cagatatcga
     1801 tgttgtttct gttcttgcaa tgggatttcc ctcatacagg ggagggatca tttactgggc
     1861 taataatact attggataca aatatattca ttcaagactt gaaacatggg cgagtaaata
     1921 tggagaattc ttcaagcctt gtgcgtatct gaaggaacag tctttactag ggactacgaa
     1981 gaacacgcag atcaaatcac agatgtagat aatcatatgg ttacttacag tatgggcgtg
     2041 taaaacgtag caaaaaccaa gataaaaatt acatgagtat tgtgttgact ttgtgtgcac
     2101 gttataacac aaatctatac taccgcttat atacatgctt atggggtcac acactttaac
     2161 atttagacac ctttattata tattgt
//
LOCUS       XR_011778889             320 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904573), ncRNA.
ACCESSION   XR_011778889
VERSION     XR_011778889.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..320
                     /gene="LOC139904573"
                     /note="uncharacterized LOC139904573; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904573"
     ncRNA           1..320
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904573"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904573"
ORIGIN      
        1 cttttaggag caaatatctt ttataagggg tttgattgga acaaaagtct tactatttac
       61 caaaacttcg tgcttaggat gacatgaaaa atcaaaactt gattctggta gaagacaaga
      121 agccgttgat tgaatttcaa aggtgattat tttttgtcat catacaagct gtgagaatgc
      181 acaatgaaat ccaagccacc tgtaacgcac cattcatgca acttttcttt tgtgtttatg
      241 taattatgtc atgaaattgt gatcatcaca aacattgctt gagcttaggt taggggaaac
      301 cacttgttca ttttaaatta
//
LOCUS       XM_071886488            1029 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At1g80270, mitochondrial-like
            (LOC139904574), mRNA.
ACCESSION   XM_071886488
VERSION     XM_071886488.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1029
                     /gene="LOC139904574"
                     /note="pentatricopeptide repeat-containing protein
                     At1g80270, mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904574"
     CDS             226..1029
                     /gene="LOC139904574"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At1g80270, mitochondrial-like"
                     /protein_id="XP_071742589.1"
                     /db_xref="GeneID:139904574"
                     /translation="MKSRNILTKLCRHYLYAGHNEKGNNVLQEMEGIDLKQNRQVCSD
                     LLPLYATLRSIDDVIKIWEVCKSNPQFDECMNAIDAYGKLNKIEEAEAVFDQTVTLYQ
                     NISSKHYAVMLKVYANNKMLSKGKNLVKQMAESGFKIGLLTWDALVKLYVEAGEVEKA
                     DSILRRASEQNRSKPFFDTYMTILDQYAKKGDVHNAEKIFYWMKQDGYVARLKQYHTL
                     LQTYINAKAPAYGFRERIKADNVFPNRALEGQLAEVDAFKKTAGSDLLD"
     misc_feature    346..426
                     /gene="LOC139904574"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    <457..>957
                     /gene="LOC139904574"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional; Region: PLN03081"
                     /db_xref="CDD:215563"
     misc_feature    457..525
                     /gene="LOC139904574"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    541..630
                     /gene="LOC139904574"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    646..723
                     /gene="LOC139904574"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    754..843
                     /gene="LOC139904574"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tgttaggcag agagaatcca agttttggat ctcctatgaa tttctattat ccttgttctt
       61 attatttttc atctatcaat taatcattcc gataatttgt tccttattga tcatatattt
      121 gtctactgct gctatttgtt cattaccacc tgctgtgatc atttgattct tatcactaca
      181 cctgagaaaa accgtaaaca agaaaggggt tttttagttt tgaagatgaa gagcagaaat
      241 atcttgacaa agctttgcag gcactattta tacgcaggtc ataacgaaaa aggaaacaat
      301 gtattacaag aaatggaagg gattgactta aagcaaaacc gtcaggtttg ttctgatttg
      361 ctcccacttt acgcgacact tcgaagtatc gatgatgtca ttaaaatctg ggaggtatgc
      421 aagtcgaatc cacagtttga tgaatgcatg aacgctatcg atgcttacgg aaaactaaat
      481 aaaattgaag aagccgaagc agtgtttgac caaacggtta ctctgtatca aaatatatca
      541 tctaagcatt atgctgtgat gctaaaagtt tatgcgaata ataaaatgtt atcgaaagga
      601 aagaatctgg tgaaacaaat ggcagaaagt ggtttcaaaa tcggactttt gacttgggac
      661 gctttagtca aactatatgt tgaagcaggc gaggttgaaa aagctgattc gattttgcgt
      721 agggcttcag agcaaaacag atcaaaacca ttttttgata cttatatgac tatattggat
      781 cagtatgcaa aaaaaggtga tgtacataat gctgagaaga tattttattg gatgaagcaa
      841 gatggttatg tcgcgaggtt gaaacaatat catactcttt tgcaaacgta tataaacgcc
      901 aaggctcctg cgtatggatt tagagaacgg attaaggccg ataatgtgtt cccgaataga
      961 gcattggaag gacagttggc tgaagttgat gcttttaaga aaactgcagg gtctgatttg
     1021 ttggattaa
//
LOCUS       XM_071886489            2069 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase At1g09600 (LOC139904575), mRNA.
ACCESSION   XM_071886489
VERSION     XM_071886489.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2069
                     /gene="LOC139904575"
                     /note="probable serine/threonine-protein kinase At1g09600;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 101 Proteins"
                     /db_xref="GeneID:139904575"
     CDS             55..1803
                     /gene="LOC139904575"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase
                     At1g09600"
                     /protein_id="XP_071742590.1"
                     /db_xref="GeneID:139904575"
                     /translation="MGGICSKNCGTSRNDRQEEEGKFDGIQVADPVNKESVTQNINNE
                     KQKDNHKQSLSERVLGSKRIQKIKSIVGGTQGAQKAAGWPSWLTSVASEAVQGWVPRS
                     ADSYEMLNKIGQGTYSSVYKARDLQNDRIVAIKKVRFVNMDPESVRFMAREICILRRL
                     DHPNCMKLQALVTSKFSGTLYLVFDYMEHDLAGLLQTQKVKKFTLPQIKCYMQQLLLG
                     MEHCHSRGILHRDLKGANILLDNNGILKIGDFGLAARFEPGQKEPLTSRVVTLWYRAP
                     ELLFGSTSYGVAIDMWSAGCILAELFLGRPIMPGRTEVEQIHKIFKLCGSPSEEYWSK
                     SKLPHATSFKPQHPYERRIIDTFQQYLPSSALALLDTLLAIEPEARGTATSALSSEFF
                     TTEPLPCDPSNLPVYPPSKEFDARYREEEARKRKAEAMKGHAPDSVRVADFKSQSKPQ
                     GQLVARKYNPQERRAKKGFSYSNSEIHQSAVTSLAKNLKDDTLGTSLRMVLLHNDPAP
                     KGPMTNMHPAQESTKLDYSTNKVTMGHAKRINRVYSGPLMPPGGSTEDMLKEHERHIQ
                     AAVRKARAEKAKSRLL"
     misc_feature    370..1230
                     /gene="LOC139904575"
                     /note="Catalytic domain of Cyclin-Dependent protein Kinase
                     9-like Serine/Threonine Kinases; Region: STKc_CDK9_like;
                     cd07840"
                     /db_xref="CDD:270832"
     misc_feature    order(388..399,412..414,451..453,457..459,508..510,
                     550..552,604..615,622..624,628..633,745..747,751..753,
                     757..762,766..768,799..801,808..810,847..849,853..864,
                     868..870,982..987)
                     /gene="LOC139904575"
                     /note="active site"
                     /db_xref="CDD:270832"
     misc_feature    order(388..399,412..414,451..453,457..459,550..552,
                     604..615,622..624,631..633,757..762,766..768,799..801)
                     /gene="LOC139904575"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270832"
     misc_feature    order(484..492,496..498,505..507,517..519,526..528,
                     556..567,571..573,592..594)
                     /gene="LOC139904575"
                     /note="CDK/cyclin interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:270832"
     misc_feature    order(508..510,628..630,745..747,751..753,808..810,
                     847..849,853..864,868..870,982..987)
                     /gene="LOC139904575"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270832"
     misc_feature    order(796..831,844..870)
                     /gene="LOC139904575"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270832"
ORIGIN      
        1 agtattgatt caattgagat aaatccttgt atttatcgat taaaaagtga aagaatgggt
       61 ggaatttgtt cgaaaaactg tggaacgagt agaaatgata ggcaagaaga agagggcaag
      121 tttgatggaa tacaagtcgc tgatcctgta aataaagaaa gtgttacaca aaatattaat
      181 aacgagaaac aaaaagataa tcataaacaa tcgttatctg aaagagtact tggttcgaaa
      241 aggattcaaa agattaaaag tattgttggt gggactcaag gtgcacaaaa agcagctgga
      301 tggccatcgt ggctaacttc ggttgcttca gaagctgtac aaggatgggt cccacgcagt
      361 gccgactcat atgagatgct aaacaaaatt ggtcaaggaa cttatagtag tgtgtacaaa
      421 gctcgtgatc tgcaaaacga tagaattgtt gccataaaga aagtgcggtt tgtgaatatg
      481 gaccctgaaa gtgtgcgttt tatggcccga gagatctgta tattacgtag actagaccac
      541 ccaaattgta tgaagcttca agctttggtt acttcaaagt tttcaggaac attgtatctt
      601 gtttttgatt atatggagca tgatcttgct ggccttttac aaactcagaa agtcaagaaa
      661 ttcacactgc cacagattaa atgttatatg caacaactcc ttcttggaat ggagcactgc
      721 cactcgcgtg gtattcttca tcgagacctt aagggtgcaa atattctact cgacaacaat
      781 ggaattctca agattgggga tttcggtctt gctgcacggt ttgaaccagg ccaaaaggaa
      841 ccattaacta gccgtgttgt aactctatgg tatagagctc ctgaactttt attcggttca
      901 acgtcatatg gtgttgccat tgatatgtgg agtgcgggtt gcattcttgc agaactcttt
      961 ttaggaagac ctatcatgcc gggaagaact gaggttgagc aaatacataa aatcttcaag
     1021 ctttgtggtt caccttcaga ggaatattgg agcaaatcaa agttgcctca tgcaactagt
     1081 tttaaacctc agcatccgta tgagcgtcgt attatcgaca cgttccaaca atacttgcct
     1141 tcttctgctt tggctctttt agatactctc cttgcaattg aaccggaagc acgtgggacc
     1201 gcaacttctg cactttctag cgagttcttc acgacggaac ctcttccttg tgatccatcc
     1261 aatttaccag tataccctcc aagcaaagag tttgatgcta ggtaccgaga agaggaagct
     1321 agaaagagga aagctgaagc aatgaaagga catgcgcctg actctgttag agtagcggat
     1381 ttcaaatcac agtctaaacc acagggacaa ttggttgcga ggaagtacaa tccgcaggag
     1441 cgaagagcga agaaaggatt ctcgtattct aactcggaga tacaccaaag tgctgttaca
     1501 tcattggcta agaacctaaa agacgacaca cttggtacca gtttaagaat ggtgcttcta
     1561 cacaatgacc ctgcaccaaa aggaccaatg accaacatgc atccggctca agaatccaca
     1621 aaacttgatt attcgaccaa caaagtcacc atgggccacg caaagaggat aaacagggta
     1681 tattctggac cattgatgcc tccaggtggg agcacggaag acatgctcaa agaacatgaa
     1741 agacatattc aagcagcagt tcgaaaagca cgtgcagaaa aagccaaaag tagattgctt
     1801 taaacttatt atgatccgaa gtcgaacaat acctatgaaa gtgagtattg ttgtggttgc
     1861 aatcaaacat gatgcgaaac taatgaagtg tgaatgggat gaagatgtgg cgttcatagt
     1921 gtcatgcaca gggctaaaat cacacataag taatgcatag ttgcatacca ctgtgaaata
     1981 cagaacttga actacaaatg aaaatgaaat ccggtgcctc acagttgaca taactgacat
     2041 atcctgtgtt atagcaagat gttaatcat
//
LOCUS       XM_071886490            1781 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides signal recognition particle
            subunit SRP54 2-like (LOC139904576), mRNA.
ACCESSION   XM_071886490
VERSION     XM_071886490.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1781
                     /gene="LOC139904576"
                     /note="signal recognition particle subunit SRP54 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 20 Proteins"
                     /db_xref="GeneID:139904576"
     CDS             48..1544
                     /gene="LOC139904576"
                     /codon_start=1
                     /product="signal recognition particle subunit SRP54
                     2-like"
                     /protein_id="XP_071742591.1"
                     /db_xref="GeneID:139904576"
                     /translation="MVLAELGGSISRALQQMSNATIIDEKVLNECLNEISRALLQSDV
                     QFKLVREMQVNIKKIVNLDDLAAGHNKRRIIQQAIFSELCKMLDPGKPSFTPKKSKPS
                     VVMFVGLQGSGKTTTCTKYAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY
                     GSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEVALFEEMRQVAEATKPDLVI
                     FVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTG
                     EHMDEFEVFDVKPFVNRLLGMGDLSGFMDKIQEVVPMDQQPELLQKLSEGNFTMRIMY
                     EQFQNLLKMGPINQVFSMLPGFSSELMPKGHEKESQAKIKRYMTMMDSMTNEELDSTN
                     PKLMNESRMMRIARGAGRQVREVVEMFEEYKRLAKIWSKMKGLKIPKKGDMSSLSRNM
                     NAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSGKGMGDMMGMFGGGDK"
     misc_feature    51..1331
                     /gene="LOC139904576"
                     /note="signal recognition particle protein SRP54; Region:
                     SRP54_euk; TIGR01425"
                     /db_xref="CDD:273615"
     polyA_site      1781
                     /gene="LOC139904576"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acggtttcag attctctcct gagcagatta acagaaatta atcaaagatg gtgttagcag
       61 agttaggtgg gagcatttca cgtgctctcc agcagatgag caatgcaacg atcatcgatg
      121 aaaaagttct taacgagtgt ctaaatgaaa tctcccgcgc tcttcttcaa tccgatgttc
      181 aattcaaact tgttcgtgaa atgcaagtca atattaagaa gatcgttaat ctcgatgatc
      241 ttgctgctgg acataacaaa cgaagaatca tccagcaggc tatttttagc gagctctgca
      301 agatgttaga tcccgggaag ccgtctttca cacctaaaaa aagcaaacca agtgttgtca
      361 tgtttgtggg tctacaaggt tccggaaaaa cgacaacctg tacaaagtat gcatatcacc
      421 accagaagaa gggctggaaa ccagctctgg tttgtgcaga tacattcaga gctggtgctt
      481 ttgatcaact aaaacagaat gcaacaaagg ccaagattcc gttctatgga agttatatgg
      541 agtcggaccc tgtaaaaatt gcagttgaag gtgttgagag gttcaagaag gaaaactgtg
      601 atctgattat tgttgataca agtggtcggc acaaacaaga agtggctctc ttcgaagaga
      661 tgcgtcaagt tgctgaagcg acgaaaccag atcttgttat ctttgtcatg gatagcagta
      721 tcggtcaagc cgcatttgat caagctcaag catttaagca gagtgttgct gttggagctg
      781 taattgttac taaaatggac ggccatgcta agggaggtgg agctcttagt gcagttgcag
      841 caacaaaaag cccagtcata ttcatcggaa ccggtgaaca tatggatgag tttgaagttt
      901 ttgatgttaa accatttgtc aaccgcctac taggcatggg tgacttgtct ggattcatgg
      961 acaaaatcca agaagttgtt cctatggatc agcagcctga gcttcttcaa aagctctcgg
     1021 aaggaaattt cacaatgagg attatgtatg agcaatttca aaacttgctc aaaatgggtc
     1081 ctatcaatca ggttttctca atgcttccag gatttagttc agagttgatg cctaaaggcc
     1141 atgaaaagga aagccaggca aagattaaaa gatacatgac aatgatggat tcaatgacta
     1201 acgaagagtt ggatagcacg aatccaaaac tcatgaatga atctaggatg atgcgaatag
     1261 caagaggtgc gggtcgccaa gtgagggaag ttgttgaaat gtttgaagaa tataaacgat
     1321 tggcaaagat ctggagcaag atgaagggtc ttaaaatacc taaaaaggga gatatgagtt
     1381 cattatctag aaacatgaac gcacaacaca tgagtaaggt tctccctcct caaatgctaa
     1441 agcagatcgg tggcatgggt ggcttacaaa atttgatgaa acaaatgggt tctggcaaag
     1501 gcatgggaga tatgatgggt atgtttggtg gtggcgacaa gtaattcgtc aaatcggtta
     1561 gcttagcaca atcgtatggt agatggttgg gtcatgggct agcccaagag aaggttagaa
     1621 atcttgaaac aaagataatt tctttcaaac aaagaaacat atacttgtgt aagatatact
     1681 ttcatatgcc gataatttgt tataaactaa gaacacataa aaagcgttct agtctcaact
     1741 taatgttttt taagtaagaa tttcaaggga tattttttaa a
//
LOCUS       XM_071886491            1094 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904577), transcript variant X1, mRNA.
ACCESSION   XM_071886491
VERSION     XM_071886491.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1094
                     /gene="LOC139904577"
                     /note="uncharacterized LOC139904577; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904577"
     CDS             129..881
                     /gene="LOC139904577"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742592.1"
                     /db_xref="GeneID:139904577"
                     /translation="MTDHVQEQEMEIEALEAILMDEFQEIHPSESGLNTSNRCFQITL
                     SPQDDETDESSTTPVQLGLIFSHTEKYPDEIPLLNVKSIRGIHTSDLKVLKEKLEQEA
                     SENLGMAMIYTLVSSAKDWLSELFAQDVVDDDGLEDTLKKDEVIVPHGEPVTIDTFLA
                     WRDRFEAELALERAKLIPDSALSTNKEKKLNGRQWFETVKGAVAMDEEEEEDDEDFDF
                     DDDEDFEDDEDDMLEHYLAEKDSSAHSSSTAI"
     misc_feature    144..503
                     /gene="LOC139904577"
                     /note="RWD domain of eIF-2-alpha kinase GCN2 and related
                     proteins; Region: RWD_GCN2; cd23823"
                     /db_xref="CDD:467659"
     polyA_site      1094
                     /gene="LOC139904577"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtgtactgct tcatcatttt tatcctacta gttaggtttt ttaaagtacg atcgacggag
       61 agattcgccg caacgaaagt ggaagataca cagtacaaat cttgaaggat aaagtacaat
      121 cgcacaaaat gacagaccat gtgcaggaac aggaaatgga gattgaagct ttagaagcca
      181 ttctcatgga cgagtttcaa gaaattcatc ctagtgaaag cggattgaat acttcgaatc
      241 gatgtttcca aatcactcta tctcctcagg atgatgagac tgatgaatct tctactactc
      301 cggttcagct gggattaatc ttctcacata cagaaaaata tccagatgaa ataccacttc
      361 tgaatgtgaa aagtataaga ggaattcaca cctcagacct caaagtattg aaagaaaaac
      421 tagaacaaga ggcatcggag aatcttggaa tggcaatgat atacactcta gttagctcag
      481 ctaaggattg gctttctgaa ttatttgctc aagatgttgt cgatgatgat ggtctggagg
      541 ataccttgaa aaaggatgaa gtaattgtgc ctcatggaga acctgtcaca attgatacat
      601 ttttggcatg gagagacaga ttcgaagcag aactggcact tgaaagagcc aagttgatac
      661 cggattcagc gctctcaacc aataaagaaa agaaacttaa cgggagacag tggtttgaaa
      721 ccgtgaaagg tgcagtggca atggatgaag aagaagagga agatgatgag gactttgatt
      781 ttgatgatga tgaagacttt gaagatgatg aagatgacat gcttgagcac tatctagctg
      841 aaaaagactc atctgctcat tcgtcatcaa cagccatcta gagacaattg ctactttgtc
      901 attcagaaac aacaacaaca aaacattgtt tgtcgcaatc tgggtgctgt tttttaactt
      961 tttacccacc cacaaatagt tgtcctaaac actcgatgca tacttttaat gcataaccaa
     1021 ggtagttatt gtggtgcttt taccttggtc taatatgaat caaaacgggg tttacctcgt
     1081 tttcgaaatt cata
//
LOCUS       XM_071886492             966 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904577), transcript variant X2, mRNA.
ACCESSION   XM_071886492
VERSION     XM_071886492.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139904577"
                     /note="uncharacterized LOC139904577; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139904577"
     CDS             1..753
                     /gene="LOC139904577"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742593.1"
                     /db_xref="GeneID:139904577"
                     /translation="MTDHVQEQEMEIEALEAILMDEFQEIHPSESGLNTSNRCFQITL
                     SPQDDETDESSTTPVQLGLIFSHTEKYPDEIPLLNVKSIRGIHTSDLKVLKEKLEQEA
                     SENLGMAMIYTLVSSAKDWLSELFAQDVVDDDGLEDTLKKDEVIVPHGEPVTIDTFLA
                     WRDRFEAELALERAKLIPDSALSTNKEKKLNGRQWFETVKGAVAMDEEEEEDDEDFDF
                     DDDEDFEDDEDDMLEHYLAEKDSSAHSSSTAI"
     misc_feature    16..375
                     /gene="LOC139904577"
                     /note="RWD domain of eIF-2-alpha kinase GCN2 and related
                     proteins; Region: RWD_GCN2; cd23823"
                     /db_xref="CDD:467659"
     polyA_site      966
                     /gene="LOC139904577"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgacagacc atgtgcagga acaggaaatg gagattgaag ctttagaagc cattctcatg
       61 gacgagtttc aagaaattca tcctagtgaa agcggattga atacttcgaa tcgatgtttc
      121 caaatcactc tatctcctca ggatgatgag actgatgaat cttctactac tccggttcag
      181 ctgggattaa tcttctcaca tacagaaaaa tatccagatg aaataccact tctgaatgtg
      241 aaaagtataa gaggaattca cacctcagac ctcaaagtat tgaaagaaaa actagaacaa
      301 gaggcatcgg agaatcttgg aatggcaatg atatacactc tagttagctc agctaaggat
      361 tggctttctg aattatttgc tcaagatgtt gtcgatgatg atggtctgga ggataccttg
      421 aaaaaggatg aagtaattgt gcctcatgga gaacctgtca caattgatac atttttggca
      481 tggagagaca gattcgaagc agaactggca cttgaaagag ccaagttgat accggattca
      541 gcgctctcaa ccaataaaga aaagaaactt aacgggagac agtggtttga aaccgtgaaa
      601 ggtgcagtgg caatggatga agaagaagag gaagatgatg aggactttga ttttgatgat
      661 gatgaagact ttgaagatga tgaagatgac atgcttgagc actatctagc tgaaaaagac
      721 tcatctgctc attcgtcatc aacagccatc tagagacaat tgctactttg tcattcagaa
      781 acaacaacaa caaaacattg tttgtcgcaa tctgggtgct gttttttaac tttttaccca
      841 cccacaaata gttgtcctaa acactcgatg catactttta atgcataacc aaggtagtta
      901 ttgtggtgct tttaccttgg tctaatatga atcaaaacgg ggtttacctc gttttcgaaa
      961 ttcata
//
LOCUS       XM_071886493            1044 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904577), transcript variant X3, mRNA.
ACCESSION   XM_071886493
VERSION     XM_071886493.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1044
                     /gene="LOC139904577"
                     /note="uncharacterized LOC139904577; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904577"
     CDS             129..881
                     /gene="LOC139904577"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742594.1"
                     /db_xref="GeneID:139904577"
                     /translation="MTDHVQEQEMEIEALEAILMDEFQEIHPSESGLNTSNRCFQITL
                     SPQDDETDESSTTPVQLGLIFSHTEKYPDEIPLLNVKSIRGIHTSDLKVLKEKLEQEA
                     SENLGMAMIYTLVSSAKDWLSELFAQDVVDDDGLEDTLKKDEVIVPHGEPVTIDTFLA
                     WRDRFEAELALERAKLIPDSALSTNKEKKLNGRQWFETVKGAVAMDEEEEEDDEDFDF
                     DDDEDFEDDEDDMLEHYLAEKDSSPHSSSTAT"
     misc_feature    144..503
                     /gene="LOC139904577"
                     /note="RWD domain of eIF-2-alpha kinase GCN2 and related
                     proteins; Region: RWD_GCN2; cd23823"
                     /db_xref="CDD:467659"
ORIGIN      
        1 gtgtactgct tcatcatttt tatcctacta gttaggtttt ttaaagtacg atcgacggag
       61 agattcgccg caacgaaagt ggaagataca cagtacaaat cttgaaggat aaagtacaat
      121 cgcacaaaat gacagaccat gtgcaggaac aggaaatgga gattgaagct ttagaagcca
      181 ttctcatgga cgagtttcaa gaaattcatc ctagtgaaag cggattgaat acttcgaatc
      241 gatgtttcca aatcactcta tctcctcagg atgatgagac tgatgaatct tctactactc
      301 cggttcagct gggattaatc ttctcacata cagaaaaata tccagatgaa ataccacttc
      361 tgaatgtgaa aagtataaga ggaattcaca cctcagacct caaagtattg aaagaaaaac
      421 tagaacaaga ggcatcggag aatcttggaa tggcaatgat atacactcta gttagctcag
      481 ctaaggattg gctttctgaa ttatttgctc aagatgttgt cgatgatgat ggtctggagg
      541 ataccttgaa aaaggatgaa gtaattgtgc ctcatggaga acctgtcaca attgatacat
      601 ttttggcatg gagagacaga ttcgaagcag aactggcact tgaaagagcc aagttgatac
      661 cggattcagc gctctcaacc aataaagaaa agaaacttaa cgggagacag tggtttgaaa
      721 ccgtgaaagg tgcagtggca atggatgaag aagaagagga agatgatgag gactttgatt
      781 ttgatgatga tgaagacttt gaagatgatg aagatgacat gcttgagcac tatctagctg
      841 aaaaagactc atctcctcat tcttcatcaa cagccactta gaaacaattg ctactttgtt
      901 tattcagaaa caacaacaaa aacattgttt gtcgcaatct ggtttttacc cacccacaca
      961 tagttgtcct aaacactcga tgcagagttt taaactttta atgtacaatc aaggtctaat
     1021 atgaatcaaa acggggttta cctc
//
LOCUS       XM_071886494             918 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904577), transcript variant X4, mRNA.
ACCESSION   XM_071886494
VERSION     XM_071886494.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..918
                     /gene="LOC139904577"
                     /note="uncharacterized LOC139904577; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904577"
     CDS             1..753
                     /gene="LOC139904577"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071742595.1"
                     /db_xref="GeneID:139904577"
                     /translation="MTDHVQEQEMEIEALEAILMDEFQEIHPSESGLNTSNRCFQITL
                     SPQDDETDESSTTPVQLGLIFSHTEKYPDEIPLLNVKSIRGIHTSDLKVLKEKLEQEA
                     SENLGMAMIYTLVSSAKDWLSELFAQDVVDDDGLEDTLKKDEVIVPHGEPVTIDTFLA
                     WRDRFEAELALERAKLIPDSALSTNKEKKLNGRQWFETVKGAVAMDEEEEEDDEDFDF
                     DDDEDFEDDEDDMLEHYLAEKDSSPHSSSTAT"
     misc_feature    16..375
                     /gene="LOC139904577"
                     /note="RWD domain of eIF-2-alpha kinase GCN2 and related
                     proteins; Region: RWD_GCN2; cd23823"
                     /db_xref="CDD:467659"
ORIGIN      
        1 atgacagacc atgtgcagga acaggaaatg gagattgaag ctttagaagc cattctcatg
       61 gacgagtttc aagaaattca tcctagtgaa agcggattga atacttcgaa tcgatgtttc
      121 caaatcactc tatctcctca ggatgatgag actgatgaat cttctactac tccggttcag
      181 ctgggattaa tcttctcaca tacagaaaaa tatccagatg aaataccact tctgaatgtg
      241 aaaagtataa gaggaattca cacctcagac ctcaaagtat tgaaagaaaa actagaacaa
      301 gaggcatcgg agaatcttgg aatggcaatg atatacactc tagttagctc agctaaggat
      361 tggctttctg aattatttgc tcaagatgtt gtcgatgatg atggtctgga ggataccttg
      421 aaaaaggatg aagtaattgt gcctcatgga gaacctgtca caattgatac atttttggca
      481 tggagagaca gattcgaagc agaactggca cttgaaagag ccaagttgat accggattca
      541 gcgctctcaa ccaataaaga aaagaaactt aacgggagac agtggtttga aaccgtgaaa
      601 ggtgcagtgg caatggatga agaagaagag gaagatgatg aggactttga ttttgatgat
      661 gatgaagact ttgaagatga tgaagatgac atgcttgagc actatctagc tgaaaaagac
      721 tcatctcctc attcttcatc aacagccact tagaaacaat tgctactttg tttattcaga
      781 aacaacaaca aaaacattgt ttgtcgcaat ctggttttta cccacccaca catagttgtc
      841 ctaaacactc gatgcagagt tttaaacttt taatgtacaa tcaaggtcta atatgaatca
      901 aaacggggtt tacctcgt
//
LOCUS       XM_071886495             878 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904577), transcript variant X5, mRNA.
ACCESSION   XM_071886495
VERSION     XM_071886495.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..878
                     /gene="LOC139904577"
                     /note="uncharacterized LOC139904577; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904577"
     CDS             60..665
                     /gene="LOC139904577"
                     /codon_start=1
                     /product="uncharacterized protein isoform X5"
                     /protein_id="XP_071742596.1"
                     /db_xref="GeneID:139904577"
                     /translation="MMRLMNLLLLRLGLIFSHTEKYPDEIPLLNVKSIRGIHTSDLKV
                     LKEKLEQEASENLGMAMIYTLVSSAKDWLSELFAQDVVDDDGLEDTLKKDEVIVPHGE
                     PVTIDTFLAWRDRFEAELALERAKLIPDSALSTNKEKKLNGRQWFETVKGAVAMDEEE
                     EEDDEDFDFDDDEDFEDDEDDMLEHYLAEKDSSAHSSSTAI"
     misc_feature    <105..287
                     /gene="LOC139904577"
                     /note="RWD, DRWD, and ELF domain family; Region:
                     RWD_DRWD_ELF-like; cl45901"
                     /db_xref="CDD:480265"
     polyA_site      878
                     /gene="LOC139904577"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tagtgaaagc ggattgaata cttcgaatcg atgtttccaa atcactctat ctcctcagga
       61 tgatgagact gatgaatctt ctactactcc ggctgggatt aatcttctca catacagaaa
      121 aatatccaga tgaaatacca cttctgaatg tgaaaagtat aagaggaatt cacacctcag
      181 acctcaaagt attgaaagaa aaactagaac aagaggcatc ggagaatctt ggaatggcaa
      241 tgatatacac tctagttagc tcagctaagg attggctttc tgaattattt gctcaagatg
      301 ttgtcgatga tgatggtctg gaggatacct tgaaaaagga tgaagtaatt gtgcctcatg
      361 gagaacctgt cacaattgat acatttttgg catggagaga cagattcgaa gcagaactgg
      421 cacttgaaag agccaagttg ataccggatt cagcgctctc aaccaataaa gaaaagaaac
      481 ttaacgggag acagtggttt gaaaccgtga aaggtgcagt ggcaatggat gaagaagaag
      541 aggaagatga tgaggacttt gattttgatg atgatgaaga ctttgaagat gatgaagatg
      601 acatgcttga gcactatcta gctgaaaaag actcatctgc tcattcgtca tcaacagcca
      661 tctagagaca attgctactt tgtcattcag aaacaacaac aacaaaacat tgtttgtcgc
      721 aatctgggtg ctgtttttta actttttacc cacccacaaa tagttgtcct aaacactcga
      781 tgcatacttt taatgcataa ccaaggtagt tattgtggtg cttttacctt ggtctaatat
      841 gaatcaaaac ggggtttacc tcgttttcga aattcata
//
LOCUS       XR_011778890             391 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904578), ncRNA.
ACCESSION   XR_011778890
VERSION     XR_011778890.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..391
                     /gene="LOC139904578"
                     /note="uncharacterized LOC139904578; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904578"
     ncRNA           1..391
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904578"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904578"
ORIGIN      
        1 gatgagctcg acattgataa ggaaagcttg catacgagaa ttacaacgtt gtgaaactca
       61 tcaatgaaag aggcttttaa cattggatga tagatgacgt tgtgcataag gtacatgttg
      121 aactagctct cagctgtatg cacttccgtt ttctagagac ggtatggctt tcagagctaa
      181 aatgaatcaa caacggtctc gctggtttac tgcagctgct aaagacgctt ctgaagcagt
      241 gagatttctt cttttatttg ttgattgaat gacaatcctg gttggcagta tacaaaggtc
      301 gactgacgct ttttcaccat gtctttaact tggagtttta tacatttacc tttacaacgt
      361 atcgattcat cagctgagtt tcgattttgg c
//
LOCUS       XR_011778891             340 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904579), ncRNA.
ACCESSION   XR_011778891
VERSION     XR_011778891.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..340
                     /gene="LOC139904579"
                     /note="uncharacterized LOC139904579; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904579"
     ncRNA           1..340
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904579"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904579"
ORIGIN      
        1 agtttggcag ttgatccaac aacttctgtc tatttgcaag tgttgtttcc gtctattagc
       61 aactttgatg tatggtagat catggtttta cacgaatcca ggttacaagc tctcgaacaa
      121 gtaaagaaga aggttatgcg tgtgaaatgg ctaaacgtca gttagctacc aatggtccaa
      181 aagtgcagct gttgaccaat cacttcaaag tcaacgtctc aaatgttgat ggccacttct
      241 ttcattacag tgtcgaattt gaacatcttt taggttgtat tacctccagc tgatggtgta
      301 tacaaattac ctttgctgct acttcttaag attactaggt
//
LOCUS       XR_011778892            1754 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904580), transcript variant X1, ncRNA.
ACCESSION   XR_011778892
VERSION     XR_011778892.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1754
                     /gene="LOC139904580"
                     /note="uncharacterized LOC139904580; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904580"
     ncRNA           1..1754
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904580"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904580"
ORIGIN      
        1 aaaaaaacgc cttcaaagtc attactcaca ttttagatct gaaaagaaac acctccatct
       61 ttctctcata tgtagatccg aataaaaaca ccttcagata tggagtttcc tgtgtttgcc
      121 tcaaaacgat taagatgctc gtgaatcata tgcacaaacc aaacactgtc accttggact
      181 catcgattcc gttttggctc gtaataaacc acctctcaat atgttcaatc aagaccccct
      241 ttgccggtct aagttaatct gcaagctaac agggcacaca gtagggatga gcaaaagtgc
      301 cgaaaaaccg aaaccgaaac cgaaccggta ccgttaccga aaatcggtac cgatagggat
      361 tcagtttcgg ttcttggttt tgagaatttt cggtttcggt attttcggta tccgtaccgg
      421 ttctgtacgg tgaaaccgat tttggatccg aattatgaaa atacataaac ttcttcggtt
      481 ctttcttatg aaagctcata gctcgtttga ttgtagaaca accagctagc acatctttga
      541 tttgataata gctcgtttga ttgtagaacc aaaagtcttc aattgtttgg taaaatctat
      601 tcaaagtact acgtaatttc taactattca ccattcaatt ttgcctaaca aatgtttttc
      661 atttattttg gacaaccgtc caacattata tatcatatat tattaagatt atgttctcat
      721 tgtggtttgt caacttgcta tgcgtttcaa tagcctgaaa tgcaaattca gtagtcatac
      781 tttattgatt ttgcacatgt tacataaggt aatggactaa tggtgttact gatcacaacg
      841 aaggtgctag ttcaaattca gtagacatct ttcataatta ctacttcttc ctaatttgca
      901 atatgaagaa atctttcaaa ttcagacaac gaaggtagaa tttttggttc cattctgtac
      961 tataccgaaa atacccgtac cggtaccgtt ttgtaaattc ggttcggtat tcggttcttg
     1021 gttttgagca atttcagtat tggtactttc ggtttcggtt tcggtacagt tcggtacggt
     1081 acctgtaccg atttcatccc tagcacgcag tcaataaaag tgaggagcat atatggaagc
     1141 atatcactgg aaaacgtttc ctcaacatgc taggaacata aattgatgtg tgaagcttga
     1201 tacatttgac tcgacatata aattcagtgt taaaggaaac cacttcctac tgctttcagg
     1261 atcaattcta gttgatggaa gaatattgat acacatattc atggtcgaca ttatacatga
     1321 tccttccagg tgactgaagc tttcgcttgt gcaatgctcg aggccgctaa cctaattctt
     1381 ggtattgact tcaacaagag taatgagtgg actggtttaa ggtcgtttaa cataaaaagt
     1441 tctcatcata ttggagatgg tttaaacttt aaatccctat caaatattat cgggaaaacc
     1501 ttggccgcta ttgacgaaca taacttgatt cccttttatg aatttggaga tggtagtgcc
     1561 tcaagattga gaagattgca tgatgatccg ggatttatga ttcatgattc atgttttcgc
     1621 tgctatttat tatcgtcata tgttacaata cttttatgtt tgattttttt gttacctttt
     1681 tatgtttact gctatttgaa acatattatt taaatttgtt attaaataaa ttaagttttg
     1741 aatgtcaatt tcat
//
LOCUS       XR_011778893            1535 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904580), transcript variant X2, ncRNA.
ACCESSION   XR_011778893
VERSION     XR_011778893.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1535
                     /gene="LOC139904580"
                     /note="uncharacterized LOC139904580; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904580"
     ncRNA           1..1535
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904580"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904580"
ORIGIN      
        1 aaaaaaacgc cttcaaagtc attactcaca ttttagatct gaaaagaaac acctccatct
       61 ttctctcata tgtagatccg aataaaaaca ccttcagata tggagtttcc tgtgtttgcc
      121 tcaaaacgat taagatgctc gtgaatcata tgcacaaacc aaacactgtc accttggact
      181 catcgattcc gttttggctc gtaataaacc acctctcaat atgttcaatc aagaccccct
      241 ttgccggtct aagttaatct gcaagctaac agggcacaca gtagggatga gcaaaagtgc
      301 cgaaaaaccg aaaccgaaac cgaaccggta ccgttaccga aaatcggtac cgatagggat
      361 tcagtttcgg ttcttggttt tgagaatttt cggtttcggt attttcggta tccgtaccgg
      421 ttctgtacgg tgaaaccgat tttggatccg aattatgaaa atacataaac ttcttcggtt
      481 ctttcttatg aaagctcata gctcgtttga ttgtagaaca accagctagc acatctttga
      541 tttgataata gctcgtttga ttgtagaacc aaaagtcttc aattgtttgg taatggacta
      601 atggtgttac tgatcacaac gaaggtgcta gttcaaattc agtagacatc tttcataatt
      661 actacttctt cctaatttgc aatatgaaga aatctttcaa attcagacaa cgaaggtaga
      721 atttttggtt ccattctgta ctataccgaa aatacccgta ccggtaccgt tttgtaaatt
      781 cggttcggta ttcggttctt ggttttgagc aatttcagta ttggtacttt cggtttcggt
      841 ttcggtacag ttcggtacgg tacctgtacc gatttcatcc ctagcacgca gtcaataaaa
      901 gtgaggagca tatatggaag catatcactg gaaaacgttt cctcaacatg ctaggaacat
      961 aaattgatgt gtgaagcttg atacatttga ctcgacatat aaattcagtg ttaaaggaaa
     1021 ccacttccta ctgctttcag gatcaattct agttgatgga agaatattga tacacatatt
     1081 catggtcgac attatacatg atccttccag gtgactgaag ctttcgcttg tgcaatgctc
     1141 gaggccgcta acctaattct tggtattgac ttcaacaaga gtaatgagtg gactggttta
     1201 aggtcgttta acataaaaag ttctcatcat attggagatg gtttaaactt taaatcccta
     1261 tcaaatatta tcgggaaaac cttggccgct attgacgaac ataacttgat tcccttttat
     1321 gaatttggag atggtagtgc ctcaagattg agaagattgc atgatgatcc gggatttatg
     1381 attcatgatt catgttttcg ctgctattta ttatcgtcat atgttacaat acttttatgt
     1441 ttgatttttt tgttaccttt ttatgtttac tgctatttga aacatattat ttaaatttgt
     1501 tattaaataa attaagtttt gaatgtcaat ttcat
//
LOCUS       XR_011778894            1836 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904580), transcript variant X3, ncRNA.
ACCESSION   XR_011778894
VERSION     XR_011778894.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1836
                     /gene="LOC139904580"
                     /note="uncharacterized LOC139904580; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904580"
     ncRNA           1..1836
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904580"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139904580"
ORIGIN      
        1 aaaaaaacgc cttcaaagtc attactcaca ttttagatct gaaaagaaac acctccatct
       61 ttctctcata tgtagatccg aataaaaaca ccttcagata tggagtttcc tgtgtttgcc
      121 tcaaaacgat taagatgctc gtgaatcata tgcacaaacc aaacactgtc accttggact
      181 catcgattcc gttttggctc gtaataaacc acctctcaat atgttcaatc aagaccccct
      241 ttgccggtct aagttaatct gcaagctaac agggcacaca gtagggatga gcaaaagtgc
      301 cgaaaaaccg aaaccgaaac cgaaccggta ccgttaccga aaatcggtac cgatagggat
      361 tcagtttcgg ttcttggttt tgagaatttt cggtttcggt attttcggta tccgtaccgg
      421 ttctgtacgg tgaaaccgat tttggatccg aattatgaaa atacataaac ttcttcggtt
      481 ctttcttatg aaagctcata gctcgtttga ttgtagaaca accagctagc acatctttga
      541 tttgataata gctcgtttga ttgtagaacc aaaagtcttc aattgtttgg taaaatctat
      601 tcaaagtact acgtaatttc taactattca ccattcaatt ttgcctaaca aatgtttttc
      661 atttattttg gacaaccgtc caacattata tatcatatat tattaagatt atgttctcat
      721 tgtggtttgt caacttgcta tgcgtttcaa tagcctgaaa tgcaaattca gtagtcatac
      781 tttattgatt ttgcacatgt tacataaggt aatggactaa tggtgttact gatcacaacg
      841 aaggtgctag ttcaaattca gtagacatct ttcataatta ctacttcttc ctaatttgca
      901 atatgaagaa atctttcaaa ttcagacaac gaaggtagaa tttttggttc cattctgtac
      961 tataccgaaa atacccgtac cggtaccgtt ttgtaaattc ggttcggtat tcggttcttg
     1021 gttttgagca atttcagtat tggtactttc ggtttcggtt tcggtacagt tcggtacggt
     1081 acctgtaccg atttcatccc tagcacgcag tcaataaaag tgaggagcat atatggaagc
     1141 atatcactgg aaaacgtttc ctcaacatgc taggaacata aattgatgtg tgaagcttga
     1201 tacatttgac tcgacatata aattcagtgt taaaggaaac cacttcctac tgctttcagg
     1261 atcaattcta gggtttggaa cctagtcaag ctaggcggct cagccccacg ccgattataa
     1321 ataatcaaaa aagatgaaag aatacggtga aggttgatgg aagaatattg atacacatat
     1381 tcatggtcga cattatacat gatccttcca ggtgactgaa gctttcgctt gtgcaatgct
     1441 cgaggccgct aacctaattc ttggtattga cttcaacaag agtaatgagt ggactggttt
     1501 aaggtcgttt aacataaaaa gttctcatca tattggagat ggtttaaact ttaaatccct
     1561 atcaaatatt atcgggaaaa ccttggccgc tattgacgaa cataacttga ttccctttta
     1621 tgaatttgga gatggtagtg cctcaagatt gagaagattg catgatgatc cgggatttat
     1681 gattcatgat tcatgttttc gctgctattt attatcgtca tatgttacaa tacttttatg
     1741 tttgattttt ttgttacctt tttatgttta ctgctatttg aaacatatta tttaaatttg
     1801 ttattaaata aattaagttt tgaatgtcaa tttcat
//
LOCUS       XM_071886496            1661 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 2-oxoisovalerate
            dehydrogenase subunit alpha 2, mitochondrial-like (LOC139904581),
            transcript variant X1, mRNA.
ACCESSION   XM_071886496
VERSION     XM_071886496.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1661
                     /gene="LOC139904581"
                     /note="2-oxoisovalerate dehydrogenase subunit alpha 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139904581"
     CDS             68..1582
                     /gene="LOC139904581"
                     /codon_start=1
                     /product="2-oxoisovalerate dehydrogenase subunit alpha 2,
                     mitochondrial-like isoform X1"
                     /protein_id="XP_071742597.1"
                     /db_xref="GeneID:139904581"
                     /translation="MASSYLSKSKHMIMQSLKSKKVLMSIIMRHTSFVTNSQFCRPFH
                     IQNYADSSVALSRSFGSIYCERRLHTATSVSNKSSTEAPSRQELDFPGGKVKFTPKLI
                     FTSSSNNERTRCYRVLDEDGQLLIDSDSLNITKELAVNMYTNMVTLQVMDTIFYEAQR
                     QGRISFYLTTIGEEAINIASAAALNINDFIFPQYREPGVLLWRGFSLQEFANQVFGNK
                     YDYGKGRQMPIHYGSKKLNYITVASTVATQIPHAVGAAYSMKMDKQYSCTVTYFGDGG
                     SSTVNYKLINNFIFVIFLFILLKTLLQGDFHAALNFAAVMEAPVIFFCRNNGWAISTP
                     INDQLRSDGIVVRGKAYGVPSIRVDGNDALAVYSAVNDARKMAIEQQTPVLIEALTYR
                     AGHHSTSDDSTKYRPVDEIEWWRADQNPVTRFRKWIETKGWWSDETESEHRSNIRKQL
                     SQAIQAAERVEKPPVADMFNDVYDVPPKNLSEQEALLRKTIKKHIHEYQSDVPM"
     misc_feature    413..1534
                     /gene="LOC139904581"
                     /note="TPP-dependent pyruvate or acetoin dehydrogenase
                     subunit alpha [Energy production and conversion]; Region:
                     AcoA; COG1071"
                     /db_xref="CDD:440689"
     polyA_site      1661
                     /gene="LOC139904581"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataaataaat atgacccatt tctcctctta tctctgaaag ttctctctct gtttttaatt
       61 atcactcatg gcttcatcat acttatcgaa atccaaacac atgatcatgc aaagtttaaa
      121 atcgaaaaaa gttctcatgt caatcatcat gaggcacact tctttcgtta ctaattcgca
      181 gttttgtcgc ccttttcaca ttcagaatta tgcagattct tcagttgctt tatcacgtag
      241 ctttggatca atttattgcg aaagacgctt gcatactgca actagtgtta gcaacaagtc
      301 gtctactgaa gctccttctc gtcaagaact agattttcca ggtggaaaag tcaaatttac
      361 accaaaactg atattcacat caagttctaa taatgaaagg actcgttgtt atcgagtgct
      421 tgatgaagac ggtcagctac tcatcgatag tgattcactt aatatcacca aagaacttgc
      481 tgttaatatg tacacgaaca tggtaacact gcaagttatg gatactatct tctatgaggc
      541 acaaagacaa ggaagaattt cattttattt aaccacaatt ggagaggaag caattaacat
      601 tgcatcggca gctgctctta acattaacga ttttatcttc cctcagtaca gggagcctgg
      661 agttttactg tggagaggat ttagtttaca agagtttgca aatcaggtgt ttggtaacaa
      721 atatgattat ggtaaaggaa ggcaaatgcc tatacattac gggtcgaaaa agcttaatta
      781 cataacggtt gcatcaacag ttgcaacgca gattccacac gcggttggtg ctgcgtattc
      841 catgaagatg gacaaacaat attcttgcac ggtcacttac tttggcgatg gaggcagtag
      901 tacagtaaat tataaactta ttaacaattt tatattcgtc attttcttgt ttattttatt
      961 aaaaacatta ttgcagggag attttcatgc tgccttgaac tttgctgcgg ttatggaggc
     1021 cccggttata ttcttctgca gaaacaatgg atgggccatt agtactccaa ttaatgatca
     1081 gcttagaagt gatggtattg ttgtaagagg caaagcttac ggagtaccga gcattcgtgt
     1141 agatggtaat gatgctcttg ctgtgtattc tgctgttaac gacgcacgca aaatggctat
     1201 tgaacaacaa acacctgttt taattgaggc tctcacatat agagcaggac accattcgac
     1261 atcagatgac tcaacaaagt atcgtcctgt tgatgaaata gaatggtggc gagctgatca
     1321 aaatcctgta acgagattca gaaaatggat cgaaacaaaa ggctggtgga gtgatgagac
     1381 cgaatcagaa catcgtagca acataagaaa acagctatca caagcaattc aagctgcaga
     1441 gcgggtagaa aaacctccag tcgcagacat gttcaacgac gtatatgatg tccccccaaa
     1501 aaacctttcc gagcaggagg ctcttctaag aaaaactatt aaaaaacaca tacatgaata
     1561 tcaatctgac gttccaatgt aaagcgatat ctaatggatg aatgaatttt actaatttta
     1621 taatcccaat aaattaaaaa tgattcatct ataccatttt a
//
LOCUS       XM_071886497            1588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 2-oxoisovalerate
            dehydrogenase subunit alpha 2, mitochondrial-like (LOC139904581),
            transcript variant X2, mRNA.
ACCESSION   XM_071886497
VERSION     XM_071886497.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1588
                     /gene="LOC139904581"
                     /note="2-oxoisovalerate dehydrogenase subunit alpha 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 35 Proteins"
                     /db_xref="GeneID:139904581"
     CDS             67..1509
                     /gene="LOC139904581"
                     /codon_start=1
                     /product="2-oxoisovalerate dehydrogenase subunit alpha 2,
                     mitochondrial-like isoform X2"
                     /protein_id="XP_071742598.1"
                     /db_xref="GeneID:139904581"
                     /translation="MASSYLSKSKHMIMQSLKSKKVLMSIIMRHTSFVTNSQFCRPFH
                     IQNYADSSVALSRSFGSIYCERRLHTATSVSNKSSTEAPSRQELDFPGGKVKFTPKLI
                     FTSSSNNERTRCYRVLDEDGQLLIDSDSLNITKELAVNMYTNMVTLQVMDTIFYEAQR
                     QGRISFYLTTIGEEAINIASAAALNINDFIFPQYREPGVLLWRGFSLQEFANQVFGNK
                     YDYGKGRQMPIHYGSKKLNYITVASTVATQIPHAVGAAYSMKMDKQYSCTVTYFGDGG
                     SSTGDFHAALNFAAVMEAPVIFFCRNNGWAISTPINDQLRSDGIVVRGKAYGVPSIRV
                     DGNDALAVYSAVNDARKMAIEQQTPVLIEALTYRAGHHSTSDDSTKYRPVDEIEWWRA
                     DQNPVTRFRKWIETKGWWSDETESEHRSNIRKQLSQAIQAAERVEKPPVADMFNDVYD
                     VPPKNLSEQEALLRKTIKKHIHEYQSDVPM"
     misc_feature    412..1461
                     /gene="LOC139904581"
                     /note="TPP-dependent pyruvate or acetoin dehydrogenase
                     subunit alpha [Energy production and conversion]; Region:
                     AcoA; COG1071"
                     /db_xref="CDD:440689"
     polyA_site      1588
                     /gene="LOC139904581"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaataaata tgacccattt ctcctcttat ctctgaaagt tctctctctg tttttaatta
       61 tcactcatgg cttcatcata cttatcgaaa tccaaacaca tgatcatgca aagtttaaaa
      121 tcgaaaaaag ttctcatgtc aatcatcatg aggcacactt ctttcgttac taattcgcag
      181 ttttgtcgcc cttttcacat tcagaattat gcagattctt cagttgcttt atcacgtagc
      241 tttggatcaa tttattgcga aagacgcttg catactgcaa ctagtgttag caacaagtcg
      301 tctactgaag ctccttctcg tcaagaacta gattttccag gtggaaaagt caaatttaca
      361 ccaaaactga tattcacatc aagttctaat aatgaaagga ctcgttgtta tcgagtgctt
      421 gatgaagacg gtcagctact catcgatagt gattcactta atatcaccaa agaacttgct
      481 gttaatatgt acacgaacat ggtaacactg caagttatgg atactatctt ctatgaggca
      541 caaagacaag gaagaatttc attttattta accacaattg gagaggaagc aattaacatt
      601 gcatcggcag ctgctcttaa cattaacgat tttatcttcc ctcagtacag ggagcctgga
      661 gttttactgt ggagaggatt tagtttacaa gagtttgcaa atcaggtgtt tggtaacaaa
      721 tatgattatg gtaaaggaag gcaaatgcct atacattacg ggtcgaaaaa gcttaattac
      781 ataacggttg catcaacagt tgcaacgcag attccacacg cggttggtgc tgcgtattcc
      841 atgaagatgg acaaacaata ttcttgcacg gtcacttact ttggcgatgg aggcagtagt
      901 acaggagatt ttcatgctgc cttgaacttt gctgcggtta tggaggcccc ggttatattc
      961 ttctgcagaa acaatggatg ggccattagt actccaatta atgatcagct tagaagtgat
     1021 ggtattgttg taagaggcaa agcttacgga gtaccgagca ttcgtgtaga tggtaatgat
     1081 gctcttgctg tgtattctgc tgttaacgac gcacgcaaaa tggctattga acaacaaaca
     1141 cctgttttaa ttgaggctct cacatataga gcaggacacc attcgacatc agatgactca
     1201 acaaagtatc gtcctgttga tgaaatagaa tggtggcgag ctgatcaaaa tcctgtaacg
     1261 agattcagaa aatggatcga aacaaaaggc tggtggagtg atgagaccga atcagaacat
     1321 cgtagcaaca taagaaaaca gctatcacaa gcaattcaag ctgcagagcg ggtagaaaaa
     1381 cctccagtcg cagacatgtt caacgacgta tatgatgtcc ccccaaaaaa cctttccgag
     1441 caggaggctc ttctaagaaa aactattaaa aaacacatac atgaatatca atctgacgtt
     1501 ccaatgtaaa gcgatatcta atggatgaat gaattttact aattttataa tcccaataaa
     1561 ttaaaaatga ttcatctata ccatttta
//
LOCUS       XM_071886498            1496 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 2-oxoisovalerate
            dehydrogenase subunit alpha 2, mitochondrial-like (LOC139904581),
            transcript variant X3, mRNA.
ACCESSION   XM_071886498
VERSION     XM_071886498.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1496
                     /gene="LOC139904581"
                     /note="2-oxoisovalerate dehydrogenase subunit alpha 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139904581"
     CDS             68..1417
                     /gene="LOC139904581"
                     /codon_start=1
                     /product="2-oxoisovalerate dehydrogenase subunit alpha 2,
                     mitochondrial-like isoform X3"
                     /protein_id="XP_071742599.1"
                     /db_xref="GeneID:139904581"
                     /translation="MASSYLSKSKHMIMQSLKSKKVLMSIIMRHTSFVTNSQFCRPFH
                     IQNYADSSVALSRSFGSIYCERRLHTATSVSNKITKELAVNMYTNMVTLQVMDTIFYE
                     AQRQGRISFYLTTIGEEAINIASAAALNINDFIFPQYREPGVLLWRGFSLQEFANQVF
                     GNKYDYGKGRQMPIHYGSKKLNYITVASTVATQIPHAVGAAYSMKMDKQYSCTVTYFG
                     DGGSSTVNYKLINNFIFVIFLFILLKTLLQGDFHAALNFAAVMEAPVIFFCRNNGWAI
                     STPINDQLRSDGIVVRGKAYGVPSIRVDGNDALAVYSAVNDARKMAIEQQTPVLIEAL
                     TYRAGHHSTSDDSTKYRPVDEIEWWRADQNPVTRFRKWIETKGWWSDETESEHRSNIR
                     KQLSQAIQAAERVEKPPVADMFNDVYDVPPKNLSEQEALLRKTIKKHIHEYQSDVPM"
     misc_feature    272..1369
                     /gene="LOC139904581"
                     /note="TPP-dependent pyruvate or acetoin dehydrogenase
                     subunit alpha [Energy production and conversion]; Region:
                     AcoA; COG1071"
                     /db_xref="CDD:440689"
     polyA_site      1496
                     /gene="LOC139904581"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataaataaat atgacccatt tctcctctta tctctgaaag ttctctctct gtttttaatt
       61 atcactcatg gcttcatcat acttatcgaa atccaaacac atgatcatgc aaagtttaaa
      121 atcgaaaaaa gttctcatgt caatcatcat gaggcacact tctttcgtta ctaattcgca
      181 gttttgtcgc ccttttcaca ttcagaatta tgcagattct tcagttgctt tatcacgtag
      241 ctttggatca atttattgcg aaagacgctt gcatactgca actagtgtta gcaacaagat
      301 caccaaagaa cttgctgtta atatgtacac gaacatggta acactgcaag ttatggatac
      361 tatcttctat gaggcacaaa gacaaggaag aatttcattt tatttaacca caattggaga
      421 ggaagcaatt aacattgcat cggcagctgc tcttaacatt aacgatttta tcttccctca
      481 gtacagggag cctggagttt tactgtggag aggatttagt ttacaagagt ttgcaaatca
      541 ggtgtttggt aacaaatatg attatggtaa aggaaggcaa atgcctatac attacgggtc
      601 gaaaaagctt aattacataa cggttgcatc aacagttgca acgcagattc cacacgcggt
      661 tggtgctgcg tattccatga agatggacaa acaatattct tgcacggtca cttactttgg
      721 cgatggaggc agtagtacag taaattataa acttattaac aattttatat tcgtcatttt
      781 cttgtttatt ttattaaaaa cattattgca gggagatttt catgctgcct tgaactttgc
      841 tgcggttatg gaggccccgg ttatattctt ctgcagaaac aatggatggg ccattagtac
      901 tccaattaat gatcagctta gaagtgatgg tattgttgta agaggcaaag cttacggagt
      961 accgagcatt cgtgtagatg gtaatgatgc tcttgctgtg tattctgctg ttaacgacgc
     1021 acgcaaaatg gctattgaac aacaaacacc tgttttaatt gaggctctca catatagagc
     1081 aggacaccat tcgacatcag atgactcaac aaagtatcgt cctgttgatg aaatagaatg
     1141 gtggcgagct gatcaaaatc ctgtaacgag attcagaaaa tggatcgaaa caaaaggctg
     1201 gtggagtgat gagaccgaat cagaacatcg tagcaacata agaaaacagc tatcacaagc
     1261 aattcaagct gcagagcggg tagaaaaacc tccagtcgca gacatgttca acgacgtata
     1321 tgatgtcccc ccaaaaaacc tttccgagca ggaggctctt ctaagaaaaa ctattaaaaa
     1381 acacatacat gaatatcaat ctgacgttcc aatgtaaagc gatatctaat ggatgaatga
     1441 attttactaa ttttataatc ccaataaatt aaaaatgatt catctatacc atttta
//
LOCUS       XM_071886499            3492 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X1, mRNA.
ACCESSION   XM_071886499
VERSION     XM_071886499.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3492
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2836..3378
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742600.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3145..>3336
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctggtgag
     1141 ttgcaaataa ttcatgctgc tttattatag gtagaaaaat cggtgagttg gattaataaa
     1201 tctactacaa gctactcata actcagaatc aattctccat ccttagcata tcgtcttcta
     1261 tacgtgcatg agttgtagct gaaccagtgt gcttgtggct ctttttataa aaaaattcac
     1321 cattctgaga ttctgcgtgc tgacaataac tcaaaccatc gagccaacca ttctaaaaac
     1381 aacaacaaaa aggcgtgaat gatcagctaa caggttcttc agaatcaata tttagggttg
     1441 ggcagttgat aacagatgtg cttgttgaga gacctataaa tcttcactat gggcttggtc
     1501 tctttatagc tttacatact gctatccttt atatattgat atttaaattt caactttgtt
     1561 agtccaggta cataatatct cattatttca tcttatttat acttgattgc tttgcttggg
     1621 acaatttttt tttactgcag ttaacttatt acatattgtg tgtaatacta tttttcaaat
     1681 taagatgcta accttgtgat cttggtgaaa aaacgaagat gctacatgga gaccttgtca
     1741 agattatcgg tcatttaatc atgccacggt tctggataac tatcctattc cggtagtaga
     1801 acatatgcta gataagttac atgggttaac gttcttcctt aaaatcgggc gttatgtatt
     1861 tgttgttgtc aggtgtcata tttcaaattt tttttttttt tttttttttt taataaatgc
     1921 aatctggaag tatgtacaag catgttaaat tgaagaatgt tagcaaattg ttacattttt
     1981 cacatgtttg cctgtgacaa cggagtatgt gcttacttaa cacttgccag ttatgagatt
     2041 ggtcgaagag tgacctttgg aaaatgagca tgtagtttta gctaatcagg tttgattatt
     2101 cgttatatgt ttcttgtgta tacctttata agtttaaacg cgaggtgatg aatacattat
     2161 tggttcaggt gatttcaatg tcatggggtg caaggtgcgg tagagatggt ttcgttgtag
     2221 ttaaattgcc tcaagagtca agactcgtga agcctgttgc ttataatcca gttggagcta
     2281 ttgatggagc gggtgacgaa acccaattag agccattaat ggagtagtag ctgatggcca
     2341 tcaagtatcg tgttagatat cacaacaggc acgtgacata ttatcacatg gaatgggtgc
     2401 attgcaacaa tcgttatcta tgacaaaatg gcagcgtgtt gatttgtgcc tcgggttcat
     2461 taagtaatgt agcaaactac atggattaaa cggcaatggc tatgggttaa cttgaacact
     2521 tcgtgtctcc atctgatgag cgattttact acatctaagt gttgctctct ctctctcgcc
     2581 cacatgcata ttgccattcc cgatggacac caagcggaac tcagagtcac cacgtgatgt
     2641 tcaaaattta gagacatcaa cggggagaac atctagtggc attgctgcta tgaatatctt
     2701 gtgaatggaa cctctttaag tgattataga gttcaagtag tccataatgt ttagctttca
     2761 tgttttgcca accgttcaaa taaagatttg atcaacctgt ttagtcttca agatcttaaa
     2821 ggatggcgac gcctcatgtt tcaagttttt atagatttct cgtccaaagc actggtcggc
     2881 attgtgatca ttcttgatca ctttacttcg tttgttgttc gctttttgtg tggttacttc
     2941 atttgcttta agatgtcggc ttcaagcaac aattccgttc ctgctcatgt ttccccgtct
     3001 gccgctcgtc gtgcacgaca gcctcgcttg agagatcctg ttaaatacga catggctact
     3061 atcacccata tgaccagggc atatacgaat gagactcgca ttgatgctct tagcgactgt
     3121 atgcgtgtct tgccgcatac ggaggtgatg gatgagatta gagctgatat ggatacgttc
     3181 gttagcttca agcatgggat tgagttcgag actcggaagc gtaatcgaga ggtggacact
     3241 aagttcgagg ctcttgagag cgtggttcgt ggtctgaaga cggagttgga gcaggtgaaa
     3301 ggaaagttga ggaagtatga gactcctgac gagcctcata ccggcccagc ttatcacacc
     3361 cgctccaaga agatgtgatg tgattatatc atgagtgatt attttatttc atggactatt
     3421 tatcctttta tacattcatt tttgggtgat gtacggcgtt ttgccgagga ttttgttatg
     3481 ggaaattttc at
//
LOCUS       XM_071886500            3448 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X2, mRNA.
ACCESSION   XM_071886500
VERSION     XM_071886500.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3448
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2792..3334
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742601.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3101..>3292
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat atagatatac agattaaagg aaaggagtac
      421 atgatcgtct agagctgggt agattgctaa ttagaggaaa gaatgatatg gcaagctatc
      481 tgtgtaggcc ttatgtttca agtaatttcg gtgtttagtg ttaatgatat gcaaaatctc
      541 aacatatgtc tgatgcccga atcagtagaa tacggaaaat aatcgcttta tctaagcaaa
      601 gattttcatg aaagggatgt ctagaagtgt aatgggcatc gctttggatt tatcgctttg
      661 gagttggtga actttcacat ggtgggagat tttcatcttc tgtggaccac cccagcaatt
      721 acagtagcgg aggactatct aatcagttct gaactctcat acttaatgtg cagtttgtca
      781 ctggtttacc ttcttctgct atatggaaag attgaaggaa ctgtttgtaa gaggagacct
      841 tggtgttgat ttgctggtcg aaaaggttcc aatagtccag ctaaccaatt tctatttcta
      901 tcagcataaa atcggattag gcatgttggg taacaacata ataattgaaa tggcctacga
      961 tgtaactcca tgtgtgacat aagagctata cctgagagct aaaggggaat acctgatagt
     1021 tagacaagaa aaattcaaga ttgaccccca tgtaccgggt gaaattcctc atctctgctg
     1081 tagttgagct ggtgagttgc aaataattca tgctgcttta ttataggtag aaaaatcggt
     1141 gagttggatt aataaatcta ctacaagcta ctcataactc agaatcaatt ctccatcctt
     1201 agcatatcgt cttctatacg tgcatgagtt gtagctgaac cagtgtgctt gtggctcttt
     1261 ttataaaaaa attcaccatt ctgagattct gcgtgctgac aataactcaa accatcgagc
     1321 caaccattct aaaaacaaca acaaaaaggc gtgaatgatc agctaacagg ttcttcagaa
     1381 tcaatattta gggttgggca gttgataaca gatgtgcttg ttgagagacc tataaatctt
     1441 cactatgggc ttggtctctt tatagcttta catactgcta tcctttatat attgatattt
     1501 aaatttcaac tttgttagtc caggtacata atatctcatt atttcatctt atttatactt
     1561 gattgctttg cttgggacaa ttttttttta ctgcagttaa cttattacat attgtgtgta
     1621 atactatttt tcaaattaag atgctaacct tgtgatcttg gtgaaaaaac gaagatgcta
     1681 catggagacc ttgtcaagat tatcggtcat ttaatcatgc cacggttctg gataactatc
     1741 ctattccggt agtagaacat atgctagata agttacatgg gttaacgttc ttccttaaaa
     1801 tcgggcgtta tgtatttgtt gttgtcaggt gtcatatttc aaattttttt tttttttttt
     1861 tttttttaat aaatgcaatc tggaagtatg tacaagcatg ttaaattgaa gaatgttagc
     1921 aaattgttac atttttcaca tgtttgcctg tgacaacgga gtatgtgctt acttaacact
     1981 tgccagttat gagattggtc gaagagtgac ctttggaaaa tgagcatgta gttttagcta
     2041 atcaggtttg attattcgtt atatgtttct tgtgtatacc tttataagtt taaacgcgag
     2101 gtgatgaata cattattggt tcaggtgatt tcaatgtcat ggggtgcaag gtgcggtaga
     2161 gatggtttcg ttgtagttaa attgcctcaa gagtcaagac tcgtgaagcc tgttgcttat
     2221 aatccagttg gagctattga tggagcgggt gacgaaaccc aattagagcc attaatggag
     2281 tagtagctga tggccatcaa gtatcgtgtt agatatcaca acaggcacgt gacatattat
     2341 cacatggaat gggtgcattg caacaatcgt tatctatgac aaaatggcag cgtgttgatt
     2401 tgtgcctcgg gttcattaag taatgtagca aactacatgg attaaacggc aatggctatg
     2461 ggttaacttg aacacttcgt gtctccatct gatgagcgat tttactacat ctaagtgttg
     2521 ctctctctct ctcgcccaca tgcatattgc cattcccgat ggacaccaag cggaactcag
     2581 agtcaccacg tgatgttcaa aatttagaga catcaacggg gagaacatct agtggcattg
     2641 ctgctatgaa tatcttgtga atggaacctc tttaagtgat tatagagttc aagtagtcca
     2701 taatgtttag ctttcatgtt ttgccaaccg ttcaaataaa gatttgatca acctgtttag
     2761 tcttcaagat cttaaaggat ggcgacgcct catgtttcaa gtttttatag atttctcgtc
     2821 caaagcactg gtcggcattg tgatcattct tgatcacttt acttcgtttg ttgttcgctt
     2881 tttgtgtggt tacttcattt gctttaagat gtcggcttca agcaacaatt ccgttcctgc
     2941 tcatgtttcc ccgtctgccg ctcgtcgtgc acgacagcct cgcttgagag atcctgttaa
     3001 atacgacatg gctactatca cccatatgac cagggcatat acgaatgaga ctcgcattga
     3061 tgctcttagc gactgtatgc gtgtcttgcc gcatacggag gtgatggatg agattagagc
     3121 tgatatggat acgttcgtta gcttcaagca tgggattgag ttcgagactc ggaagcgtaa
     3181 tcgagaggtg gacactaagt tcgaggctct tgagagcgtg gttcgtggtc tgaagacgga
     3241 gttggagcag gtgaaaggaa agttgaggaa gtatgagact cctgacgagc ctcataccgg
     3301 cccagcttat cacacccgct ccaagaagat gtgatgtgat tatatcatga gtgattattt
     3361 tatttcatgg actatttatc cttttataca ttcatttttg ggtgatgtac ggcgttttgc
     3421 cgaggatttt gttatgggaa attttcat
//
LOCUS       XM_071886501            3413 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X3, mRNA.
ACCESSION   XM_071886501
VERSION     XM_071886501.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3413
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3413
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2757..3299
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742602.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3066..>3257
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctggtgag
     1141 ttgcaaataa ttcatgctgc tttattatag gtagaaaaat cggtgagttg gattaataaa
     1201 tctactacaa gctactcata actcagaatc aattctccat ccttagcata tcgtcttcta
     1261 tacgtgcatg agttgtagct gaaccagtgt gcttgtggct ctttttataa aaaaattcac
     1321 cattctgaga ttctgcgtgc tgacaataac tcaaaccatc gagccaacca ttctaaaaac
     1381 aacaacaaaa aggcgtgaat gatcagctaa caggttcttc agaatcaata tttagggttg
     1441 ggcagttgat aacagatgtg cttgttgaga gacctataaa tcttcactat gggcttggtc
     1501 tctttatagc tttacatact gctatccttt atatattgat atttaaattt caactttgtt
     1561 agtccaggta cataatatct cattatttca tcttatttat acttgattgc tttgcttggg
     1621 acaatttttt tttactgcag ttaacttatt acatattgtg tgtaatacta tttttcaaat
     1681 taagatgcta accttgtgat cttggtgaaa aaacgaagat gctacatgga gaccttgtca
     1741 agattatcgg tcatttaatc atgccacggt tctggataac tatcctattc cggtagtaga
     1801 acatatgcta gataagttac atgggttaac gttcttcctt aaaatcgggc gttatgtatt
     1861 tgttgttgtc aggtgtcata tttcaaattt tttttttttt tttttttttt taataaatgc
     1921 aatctggaag tatgtacaag catgttaaat tgaagaatgt tagcaaattg ttacattttt
     1981 cacatgtttg cctgtgacaa cggagtatgt gcttacttaa cacttgccag ttatgagatt
     2041 ggtcgaagag tgacctttgg aaaatgagca tgtagtttta gctaatcagg tgatttcaat
     2101 gtcatggggt gcaaggtgcg gtagagatgg tttcgttgta gttaaattgc ctcaagagtc
     2161 aagactcgtg aagcctgttg cttataatcc agttggagct attgatggag cgggtgacga
     2221 aacccaatta gagccattaa tggagtagta gctgatggcc atcaagtatc gtgttagata
     2281 tcacaacagg cacgtgacat attatcacat ggaatgggtg cattgcaaca atcgttatct
     2341 atgacaaaat ggcagcgtgt tgatttgtgc ctcgggttca ttaagtaatg tagcaaacta
     2401 catggattaa acggcaatgg ctatgggtta acttgaacac ttcgtgtctc catctgatga
     2461 gcgattttac tacatctaag tgttgctctc tctctctcgc ccacatgcat attgccattc
     2521 ccgatggaca ccaagcggaa ctcagagtca ccacgtgatg ttcaaaattt agagacatca
     2581 acggggagaa catctagtgg cattgctgct atgaatatct tgtgaatgga acctctttaa
     2641 gtgattatag agttcaagta gtccataatg tttagctttc atgttttgcc aaccgttcaa
     2701 ataaagattt gatcaacctg tttagtcttc aagatcttaa aggatggcga cgcctcatgt
     2761 ttcaagtttt tatagatttc tcgtccaaag cactggtcgg cattgtgatc attcttgatc
     2821 actttacttc gtttgttgtt cgctttttgt gtggttactt catttgcttt aagatgtcgg
     2881 cttcaagcaa caattccgtt cctgctcatg tttccccgtc tgccgctcgt cgtgcacgac
     2941 agcctcgctt gagagatcct gttaaatacg acatggctac tatcacccat atgaccaggg
     3001 catatacgaa tgagactcgc attgatgctc ttagcgactg tatgcgtgtc ttgccgcata
     3061 cggaggtgat ggatgagatt agagctgata tggatacgtt cgttagcttc aagcatggga
     3121 ttgagttcga gactcggaag cgtaatcgag aggtggacac taagttcgag gctcttgaga
     3181 gcgtggttcg tggtctgaag acggagttgg agcaggtgaa aggaaagttg aggaagtatg
     3241 agactcctga cgagcctcat accggcccag cttatcacac ccgctccaag aagatgtgat
     3301 gtgattatat catgagtgat tattttattt catggactat ttatcctttt atacattcat
     3361 ttttgggtga tgtacggcgt tttgccgagg attttgttat gggaaatttt cat
//
LOCUS       XM_071886502            3551 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X4, mRNA.
ACCESSION   XM_071886502
VERSION     XM_071886502.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3551
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3551
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2895..3437
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742603.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3204..>3395
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaaggc tttctcaata tctaaaaaaa actcacaacc
      421 cttaactctt catgatggcc acgggagatg gttgaagttt tagcacttga tcagaagact
      481 ctcgggttaa gatatagata tacagattaa aggaaaggag tacatgatcg tctagagctg
      541 ggtagattgc taattagagg aaagaatgat atggcaagct atctgtgtag gccttatgtt
      601 tcaagtaatt tcggtgttta gtgttaatga tatgcaaaat ctcaacatat gtctgatgcc
      661 cgaatcagta gaatacggaa aataatcgct ttatctaagc aaagattttc atgaaaggga
      721 tgtctagaag tgtaatgggc atcgctttgg atttatcgct ttggagttgg tgaactttca
      781 catggtggga gattttcatc ttctgtggac caccccagca attacagtag cggaggacta
      841 tctaatcagt tctgaactct catacttaat gtgcagtttg tcactggttt accttcttct
      901 gctatatgga aagattgaag gaactgtttg taagaggaga ccttggtgtt gatttgctgg
      961 tcgaaaaggt tccaatagtc cagctaacca atttctattt ctatcagcat aaaatcggat
     1021 taggcatgtt gggtaacaac ataataattg aaatggccta cgatgtaact ccatgtgtga
     1081 cataagagct atacctgaga gctaaagggg aatacctgat agttagacaa gaaaaattca
     1141 agattgaccc ccatgtaccg ggtgaaattc ctcatctctg ctgtagttga gctggtgagt
     1201 tgcaaataat tcatgctgct ttattatagg tagaaaaatc ggtgagttgg attaataaat
     1261 ctactacaag ctactcataa ctcagaatca attctccatc cttagcatat cgtcttctat
     1321 acgtgcatga gttgtagctg aaccagtgtg cttgtggctc tttttataaa aaaattcacc
     1381 attctgagat tctgcgtgct gacaataact caaaccatcg agccaaccat tctaaaaaca
     1441 acaacaaaaa ggcgtgaatg atcagctaac aggttcttca gaatcaatat ttagggttgg
     1501 gcagttgata acagatgtgc ttgttgagag acctataaat cttcactatg ggcttggtct
     1561 ctttatagct ttacatactg ctatccttta tatattgata tttaaatttc aactttgtta
     1621 gtccaggtac ataatatctc attatttcat cttatttata cttgattgct ttgcttggga
     1681 caattttttt ttactgcagt taacttatta catattgtgt gtaatactat ttttcaaatt
     1741 aagatgctaa ccttgtgatc ttggtgaaaa aacgaagatg ctacatggag accttgtcaa
     1801 gattatcggt catttaatca tgccacggtt ctggataact atcctattcc ggtagtagaa
     1861 catatgctag ataagttaca tgggttaacg ttcttcctta aaatcgggcg ttatgtattt
     1921 gttgttgtca ggtgtcatat ttcaaatttt tttttttttt tttttttttt aataaatgca
     1981 atctggaagt atgtacaagc atgttaaatt gaagaatgtt agcaaattgt tacatttttc
     2041 acatgtttgc ctgtgacaac ggagtatgtg cttacttaac acttgccagt tatgagattg
     2101 gtcgaagagt gacctttgga aaatgagcat gtagttttag ctaatcaggt ttgattattc
     2161 gttatatgtt tcttgtgtat acctttataa gtttaaacgc gaggtgatga atacattatt
     2221 ggttcaggtg atttcaatgt catggggtgc aaggtgcggt agagatggtt tcgttgtagt
     2281 taaattgcct caagagtcaa gactcgtgaa gcctgttgct tataatccag ttggagctat
     2341 tgatggagcg ggtgacgaaa cccaattaga gccattaatg gagtagtagc tgatggccat
     2401 caagtatcgt gttagatatc acaacaggca cgtgacatat tatcacatgg aatgggtgca
     2461 ttgcaacaat cgttatctat gacaaaatgg cagcgtgttg atttgtgcct cgggttcatt
     2521 aagtaatgta gcaaactaca tggattaaac ggcaatggct atgggttaac ttgaacactt
     2581 cgtgtctcca tctgatgagc gattttacta catctaagtg ttgctctctc tctctcgccc
     2641 acatgcatat tgccattccc gatggacacc aagcggaact cagagtcacc acgtgatgtt
     2701 caaaatttag agacatcaac ggggagaaca tctagtggca ttgctgctat gaatatcttg
     2761 tgaatggaac ctctttaagt gattatagag ttcaagtagt ccataatgtt tagctttcat
     2821 gttttgccaa ccgttcaaat aaagatttga tcaacctgtt tagtcttcaa gatcttaaag
     2881 gatggcgacg cctcatgttt caagttttta tagatttctc gtccaaagca ctggtcggca
     2941 ttgtgatcat tcttgatcac tttacttcgt ttgttgttcg ctttttgtgt ggttacttca
     3001 tttgctttaa gatgtcggct tcaagcaaca attccgttcc tgctcatgtt tccccgtctg
     3061 ccgctcgtcg tgcacgacag cctcgcttga gagatcctgt taaatacgac atggctacta
     3121 tcacccatat gaccagggca tatacgaatg agactcgcat tgatgctctt agcgactgta
     3181 tgcgtgtctt gccgcatacg gaggtgatgg atgagattag agctgatatg gatacgttcg
     3241 ttagcttcaa gcatgggatt gagttcgaga ctcggaagcg taatcgagag gtggacacta
     3301 agttcgaggc tcttgagagc gtggttcgtg gtctgaagac ggagttggag caggtgaaag
     3361 gaaagttgag gaagtatgag actcctgacg agcctcatac cggcccagct tatcacaccc
     3421 gctccaagaa gatgtgatgt gattatatca tgagtgatta ttttatttca tggactattt
     3481 atccttttat acattcattt ttgggtgatg tacggcgttt tgccgaggat tttgttatgg
     3541 gaaattttca t
//
LOCUS       XM_071886503            3500 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X5, mRNA.
ACCESSION   XM_071886503
VERSION     XM_071886503.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3500
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3500
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2844..3386
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742604.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3153..>3344
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctggtgag
     1141 ttgcaaataa ttcatgctgc tttattatag gtagaaaaat cggtgagttg gattaataaa
     1201 tctactacaa gctactcata actcagaatc aattctccat ccttagcata tcgtcttcta
     1261 tacgtgcatg agttgtagct gaaccagtgt gcttgtggct ctttttataa aaaaattcac
     1321 cattctgaga ttctgcgtgc tgacaataac tcaaaccatc gagccaacca ttctaaaaac
     1381 aacaacaaaa aggcgtgaat gatcagctaa caggttcttc agaatcaata tttagggttg
     1441 ggcagttgat aacagatgtg cttgttgaga gacctataaa tcttcactat gggcttggtc
     1501 tctttatagc tttacatact gctatccttt atatattgat atttaaattt caactttgtt
     1561 agtccaggta cataatatct cattatttca tcttatttat acttgattgc tttgcttggg
     1621 acaatttttt tttactgcag ttaacttatt acatattgtg tgtaatacta tttttcaaat
     1681 taagatgcta accttgtgat cttggtgaaa aaacgaagat gctacatgga gaccttgtca
     1741 agattatcgg tcatttaatc atgccacggt tctggataac tatcctattc cggtagtaga
     1801 acatatgcta gataagttac atgggttaac gttcttcctt aaaatcgggc gttatgtatt
     1861 tgttgttgtc aggtgtcata tttcaaattt tttttttttt tttttttttt taataaatgc
     1921 aatctggaag tatgtacaag catgttaaat tgaagaatgt tagcaaattg ttacattttt
     1981 cacatgtttg cctgtgacaa cggagtatgt gcttacttaa cacttgccag ttatgagatt
     2041 ggtcgaagag tgacctttgg aaaatgagca tgtagtttta gctaatcagg tttgattatt
     2101 cgttatatgt ttcttgtgta tacctttata agtttaaacg cgaggtgatg aatacattat
     2161 tggttcaggt gatttcaatg tcatggggtg caaggtgcgg tagagatggt ttcgttgtag
     2221 ttaaattgcc tcaagagtca agactcgtga agcctggtaa gaagttgctt ataatccagt
     2281 tggagctatt gatggagcgg gtgacgaaac ccaattagag ccattaatgg agtagtagct
     2341 gatggccatc aagtatcgtg ttagatatca caacaggcac gtgacatatt atcacatgga
     2401 atgggtgcat tgcaacaatc gttatctatg acaaaatggc agcgtgttga tttgtgcctc
     2461 gggttcatta agtaatgtag caaactacat ggattaaacg gcaatggcta tgggttaact
     2521 tgaacacttc gtgtctccat ctgatgagcg attttactac atctaagtgt tgctctctct
     2581 ctctcgccca catgcatatt gccattcccg atggacacca agcggaactc agagtcacca
     2641 cgtgatgttc aaaatttaga gacatcaacg gggagaacat ctagtggcat tgctgctatg
     2701 aatatcttgt gaatggaacc tctttaagtg attatagagt tcaagtagtc cataatgttt
     2761 agctttcatg ttttgccaac cgttcaaata aagatttgat caacctgttt agtcttcaag
     2821 atcttaaagg atggcgacgc ctcatgtttc aagtttttat agatttctcg tccaaagcac
     2881 tggtcggcat tgtgatcatt cttgatcact ttacttcgtt tgttgttcgc tttttgtgtg
     2941 gttacttcat ttgctttaag atgtcggctt caagcaacaa ttccgttcct gctcatgttt
     3001 ccccgtctgc cgctcgtcgt gcacgacagc ctcgcttgag agatcctgtt aaatacgaca
     3061 tggctactat cacccatatg accagggcat atacgaatga gactcgcatt gatgctctta
     3121 gcgactgtat gcgtgtcttg ccgcatacgg aggtgatgga tgagattaga gctgatatgg
     3181 atacgttcgt tagcttcaag catgggattg agttcgagac tcggaagcgt aatcgagagg
     3241 tggacactaa gttcgaggct cttgagagcg tggttcgtgg tctgaagacg gagttggagc
     3301 aggtgaaagg aaagttgagg aagtatgaga ctcctgacga gcctcatacc ggcccagctt
     3361 atcacacccg ctccaagaag atgtgatgtg attatatcat gagtgattat tttatttcat
     3421 ggactattta tccttttata cattcatttt tgggtgatgt acggcgtttt gccgaggatt
     3481 ttgttatggg aaattttcat
//
LOCUS       XM_071886504            3421 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X6, mRNA.
ACCESSION   XM_071886504
VERSION     XM_071886504.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3421
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3421
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2765..3307
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742605.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3074..>3265
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctggtgag
     1141 ttgcaaataa ttcatgctgc tttattatag gtagaaaaat cggtgagttg gattaataaa
     1201 tctactacaa gctactcata actcagaatc aattctccat ccttagcata tcgtcttcta
     1261 tacgtgcatg agttgtagct gaaccagtgt gcttgtggct ctttttataa aaaaattcac
     1321 cattctgaga ttctgcgtgc tgacaataac tcaaaccatc gagccaacca ttctaaaaac
     1381 aacaacaaaa aggcgtgaat gatcagctaa caggttcttc agaatcaata tttagggttg
     1441 ggcagttgat aacagatgtg cttgttgaga gacctataaa tcttcactat gggcttggtc
     1501 tctttatagc tttacatact gctatccttt atatattgat atttaaattt caactttgtt
     1561 agtccaggta cataatatct cattatttca tcttatttat acttgattgc tttgcttggg
     1621 acaatttttt tttactgcag ttaacttatt acatattgtg tgtaatacta tttttcaaat
     1681 taagatgcta accttgtgat cttggtgaaa aaacgaagat gctacatgga gaccttgtca
     1741 agattatcgg tcatttaatc atgccacggt tctggataac tatcctattc cggtagtaga
     1801 acatatgcta gataagttac atgggttaac gttcttcctt aaaatcgggc gttatgtatt
     1861 tgttgttgtc aggtgtcata tttcaaattt tttttttttt tttttttttt taataaatgc
     1921 aatctggaag tatgtacaag catgttaaat tgaagaatgt tagcaaattg ttacattttt
     1981 cacatgtttg cctgtgacaa cggagtatgt gcttacttaa cacttgccag ttatgagatt
     2041 ggtcgaagag tgacctttgg aaaatgagca tgtagtttta gctaatcagg tgatttcaat
     2101 gtcatggggt gcaaggtgcg gtagagatgg tttcgttgta gttaaattgc ctcaagagtc
     2161 aagactcgtg aagcctggta agaagttgct tataatccag ttggagctat tgatggagcg
     2221 ggtgacgaaa cccaattaga gccattaatg gagtagtagc tgatggccat caagtatcgt
     2281 gttagatatc acaacaggca cgtgacatat tatcacatgg aatgggtgca ttgcaacaat
     2341 cgttatctat gacaaaatgg cagcgtgttg atttgtgcct cgggttcatt aagtaatgta
     2401 gcaaactaca tggattaaac ggcaatggct atgggttaac ttgaacactt cgtgtctcca
     2461 tctgatgagc gattttacta catctaagtg ttgctctctc tctctcgccc acatgcatat
     2521 tgccattccc gatggacacc aagcggaact cagagtcacc acgtgatgtt caaaatttag
     2581 agacatcaac ggggagaaca tctagtggca ttgctgctat gaatatcttg tgaatggaac
     2641 ctctttaagt gattatagag ttcaagtagt ccataatgtt tagctttcat gttttgccaa
     2701 ccgttcaaat aaagatttga tcaacctgtt tagtcttcaa gatcttaaag gatggcgacg
     2761 cctcatgttt caagttttta tagatttctc gtccaaagca ctggtcggca ttgtgatcat
     2821 tcttgatcac tttacttcgt ttgttgttcg ctttttgtgt ggttacttca tttgctttaa
     2881 gatgtcggct tcaagcaaca attccgttcc tgctcatgtt tccccgtctg ccgctcgtcg
     2941 tgcacgacag cctcgcttga gagatcctgt taaatacgac atggctacta tcacccatat
     3001 gaccagggca tatacgaatg agactcgcat tgatgctctt agcgactgta tgcgtgtctt
     3061 gccgcatacg gaggtgatgg atgagattag agctgatatg gatacgttcg ttagcttcaa
     3121 gcatgggatt gagttcgaga ctcggaagcg taatcgagag gtggacacta agttcgaggc
     3181 tcttgagagc gtggttcgtg gtctgaagac ggagttggag caggtgaaag gaaagttgag
     3241 gaagtatgag actcctgacg agcctcatac cggcccagct tatcacaccc gctccaagaa
     3301 gatgtgatgt gattatatca tgagtgatta ttttatttca tggactattt atccttttat
     3361 acattcattt ttgggtgatg tacggcgttt tgccgaggat tttgttatgg gaaattttca
     3421 t
//
LOCUS       XM_071886505            3482 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X7, mRNA.
ACCESSION   XM_071886505
VERSION     XM_071886505.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3482
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3482
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2826..3368
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742606.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3135..>3326
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagtt ttagcacttg atcagaagac tctcgggtta
      421 agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct gggtagattg
      481 ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt ttcaagtaat
      541 ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc ccgaatcagt
      601 agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg atgtctagaa
      661 gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc acatggtggg
      721 agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact atctaatcag
      781 ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc tgctatatgg
      841 aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg gtcgaaaagg
      901 ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga ttaggcatgt
      961 tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg acataagagc
     1021 tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc aagattgacc
     1081 cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctggtgag ttgcaaataa
     1141 ttcatgctgc tttattatag gtagaaaaat cggtgagttg gattaataaa tctactacaa
     1201 gctactcata actcagaatc aattctccat ccttagcata tcgtcttcta tacgtgcatg
     1261 agttgtagct gaaccagtgt gcttgtggct ctttttataa aaaaattcac cattctgaga
     1321 ttctgcgtgc tgacaataac tcaaaccatc gagccaacca ttctaaaaac aacaacaaaa
     1381 aggcgtgaat gatcagctaa caggttcttc agaatcaata tttagggttg ggcagttgat
     1441 aacagatgtg cttgttgaga gacctataaa tcttcactat gggcttggtc tctttatagc
     1501 tttacatact gctatccttt atatattgat atttaaattt caactttgtt agtccaggta
     1561 cataatatct cattatttca tcttatttat acttgattgc tttgcttggg acaatttttt
     1621 tttactgcag ttaacttatt acatattgtg tgtaatacta tttttcaaat taagatgcta
     1681 accttgtgat cttggtgaaa aaacgaagat gctacatgga gaccttgtca agattatcgg
     1741 tcatttaatc atgccacggt tctggataac tatcctattc cggtagtaga acatatgcta
     1801 gataagttac atgggttaac gttcttcctt aaaatcgggc gttatgtatt tgttgttgtc
     1861 aggtgtcata tttcaaattt tttttttttt tttttttttt taataaatgc aatctggaag
     1921 tatgtacaag catgttaaat tgaagaatgt tagcaaattg ttacattttt cacatgtttg
     1981 cctgtgacaa cggagtatgt gcttacttaa cacttgccag ttatgagatt ggtcgaagag
     2041 tgacctttgg aaaatgagca tgtagtttta gctaatcagg tttgattatt cgttatatgt
     2101 ttcttgtgta tacctttata agtttaaacg cgaggtgatg aatacattat tggttcaggt
     2161 gatttcaatg tcatggggtg caaggtgcgg tagagatggt ttcgttgtag ttaaattgcc
     2221 tcaagagtca agactcgtga agcctgttgc ttataatcca gttggagcta ttgatggagc
     2281 gggtgacgaa acccaattag agccattaat ggagtagtag ctgatggcca tcaagtatcg
     2341 tgttagatat cacaacaggc acgtgacata ttatcacatg gaatgggtgc attgcaacaa
     2401 tcgttatcta tgacaaaatg gcagcgtgtt gatttgtgcc tcgggttcat taagtaatgt
     2461 agcaaactac atggattaaa cggcaatggc tatgggttaa cttgaacact tcgtgtctcc
     2521 atctgatgag cgattttact acatctaagt gttgctctct ctctctcgcc cacatgcata
     2581 ttgccattcc cgatggacac caagcggaac tcagagtcac cacgtgatgt tcaaaattta
     2641 gagacatcaa cggggagaac atctagtggc attgctgcta tgaatatctt gtgaatggaa
     2701 cctctttaag tgattataga gttcaagtag tccataatgt ttagctttca tgttttgcca
     2761 accgttcaaa taaagatttg atcaacctgt ttagtcttca agatcttaaa ggatggcgac
     2821 gcctcatgtt tcaagttttt atagatttct cgtccaaagc actggtcggc attgtgatca
     2881 ttcttgatca ctttacttcg tttgttgttc gctttttgtg tggttacttc atttgcttta
     2941 agatgtcggc ttcaagcaac aattccgttc ctgctcatgt ttccccgtct gccgctcgtc
     3001 gtgcacgaca gcctcgcttg agagatcctg ttaaatacga catggctact atcacccata
     3061 tgaccagggc atatacgaat gagactcgca ttgatgctct tagcgactgt atgcgtgtct
     3121 tgccgcatac ggaggtgatg gatgagatta gagctgatat ggatacgttc gttagcttca
     3181 agcatgggat tgagttcgag actcggaagc gtaatcgaga ggtggacact aagttcgagg
     3241 ctcttgagag cgtggttcgt ggtctgaaga cggagttgga gcaggtgaaa ggaaagttga
     3301 ggaagtatga gactcctgac gagcctcata ccggcccagc ttatcacacc cgctccaaga
     3361 agatgtgatg tgattatatc atgagtgatt attttatttc atggactatt tatcctttta
     3421 tacattcatt tttgggtgat gtacggcgtt ttgccgagga ttttgttatg ggaaattttc
     3481 at
//
LOCUS       XM_071886506            3607 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X8, mRNA.
ACCESSION   XM_071886506
VERSION     XM_071886506.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3607
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3607
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2951..3493
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742607.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3260..>3451
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctggtgag
     1141 ttgcaaataa ttcatgctgc tttattatag gtagaaaaat cggtgagttg gattaataaa
     1201 tctactacaa gctactcata actcagaatc aattctccat ccttagcata tcgtcttcta
     1261 tacgtgcatg agttgtagct gaaccagtgt gcttgtggct ctttttataa aaaaattcac
     1321 cattctgaga ttctgcgtgc tgacaataac tcaaaccatc gagccaacca ttctaaaaac
     1381 aacaacaaaa aggcgtgaat gatcagctaa caggttcttc agaatcaata tttagggttg
     1441 ggcagttgat aacagatgtg cttgttgaga gacctataaa tcttcactat gggcttggtc
     1501 tctttatagc tttacatact gctatccttt atatattgat atttaaattt caactttgtt
     1561 agtccaggta cataatatct cattatttca tcttatttat acttgattgc tttgcttggg
     1621 acaatttttt tttactgcag ttaacttatt acatattgtg tgtaatacta tttttcaaat
     1681 taagatgcta accttgtgat cttggtgaaa aaacgaagat gctacatgga gaccttgtca
     1741 agattatcgg tcatttaatc atgccacggt tctggataac tatcctattc cggtagtaga
     1801 acatatgcta gataagttac atgggttaac gttcttcctt aaaatcgggc gttatgtatt
     1861 tgttgttgtc aggtgtcata tttcaaattt tttttttttt tttttttttt taataaatgc
     1921 aatctggaag tatgtacaag catgttaaat tgaagaatgt tagcaaattg ttacattttt
     1981 cacatgtttg cctgtgacaa cggagtatgt gcttacttaa cacttgccag ttatgagatt
     2041 ggtcgaagag tgacctttgg aaaatgagca tgtagtttta gctaatcagg tttgattatt
     2101 cgttatatgt ttcttgtgta tacctttata agtttaaacg cgaggtgatg aatacattat
     2161 tggttcaggt gatttcaatg tcatggggtg caaggtgcgg tagagatggt ttcgttgtag
     2221 ttaaattgcc tcaagagtca agactcgtga agcctgttgc ttataatcca gttggagcta
     2281 ttgatggagc gggtgacgaa acccaattag agccattaat ggagtagtag ctgatggcca
     2341 tcaagtatcg tgttagatat cacaacaggc acgtgacata ttatcacatg gaatgggtgc
     2401 attgcaacaa tcgttatcta tgacaaaatg gcagcgtgtt gatttgtgcc tcgggttcat
     2461 taagtaatgt agcaaactac atggattaaa cggcaatggc tatgggttaa cttgaacact
     2521 tcgtgtctcc atctgatgag cgattttact acatctaagt gttgctctct ctctctcgcc
     2581 cacatgcata ttgccattgt taatctcttg aatcatatta agatatgatt ccaatttccg
     2641 tgttaacttc catgaaacgt gcttttacct ctgttgactt ttatgtaaaa tcttctgatc
     2701 ttattacccc aagcccgatg gacaccaagc ggaactcaga gtcaccacgt gatgttcaaa
     2761 atttagagac atcaacgggg agaacatcta gtggcattgc tgctatgaat atcttgtgaa
     2821 tggaacctct ttaagtgatt atagagttca agtagtccat aatgtttagc tttcatgttt
     2881 tgccaaccgt tcaaataaag atttgatcaa cctgtttagt cttcaagatc ttaaaggatg
     2941 gcgacgcctc atgtttcaag tttttataga tttctcgtcc aaagcactgg tcggcattgt
     3001 gatcattctt gatcacttta cttcgtttgt tgttcgcttt ttgtgtggtt acttcatttg
     3061 ctttaagatg tcggcttcaa gcaacaattc cgttcctgct catgtttccc cgtctgccgc
     3121 tcgtcgtgca cgacagcctc gcttgagaga tcctgttaaa tacgacatgg ctactatcac
     3181 ccatatgacc agggcatata cgaatgagac tcgcattgat gctcttagcg actgtatgcg
     3241 tgtcttgccg catacggagg tgatggatga gattagagct gatatggata cgttcgttag
     3301 cttcaagcat gggattgagt tcgagactcg gaagcgtaat cgagaggtgg acactaagtt
     3361 cgaggctctt gagagcgtgg ttcgtggtct gaagacggag ttggagcagg tgaaaggaaa
     3421 gttgaggaag tatgagactc ctgacgagcc tcataccggc ccagcttatc acacccgctc
     3481 caagaagatg tgatgtgatt atatcatgag tgattatttt atttcatgga ctatttatcc
     3541 ttttatacat tcatttttgg gtgatgtacg gcgttttgcc gaggattttg ttatgggaaa
     3601 ttttcat
//
LOCUS       XM_071886507            3341 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X9, mRNA.
ACCESSION   XM_071886507
VERSION     XM_071886507.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3341
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2685..3227
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742608.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <2994..>3185
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctggtgag
     1141 ttgcaaataa ttcatgctgc tttattatag gtagaaaaat cggtgagttg gattaataaa
     1201 tctactacaa gctactcata actcagaatc aattctccat ccttagcata tcgtcttcta
     1261 tacgtgcatg agttgtagct gaaccagtgt gcttgtggct ctttttataa aaaaattcac
     1321 cattctgaga ttctgcgtgc tgacaataac tcaaaccatc gagccaacca ttctaaaaac
     1381 aacaacaaaa aggcgtgaat gatcagctaa caggttcttc agaatcaata tttagggttg
     1441 ggcagttgat aacagatgtg cttgttgaga gacctataaa tcttcactat gggcttggtc
     1501 tctttatagc tttacatact gctatccttt atatattgat atttaaattt caactttgtt
     1561 agtccagatg ctacatggag accttgtcaa gattatcggt catttaatca tgccacggtt
     1621 ctggataact atcctattcc ggtagtagaa catatgctag ataagttaca tgggttaacg
     1681 ttcttcctta aaatcgggcg ttatgtattt gttgttgtca ggtgtcatat ttcaaatttt
     1741 tttttttttt tttttttttt aataaatgca atctggaagt atgtacaagc atgttaaatt
     1801 gaagaatgtt agcaaattgt tacatttttc acatgtttgc ctgtgacaac ggagtatgtg
     1861 cttacttaac acttgccagt tatgagattg gtcgaagagt gacctttgga aaatgagcat
     1921 gtagttttag ctaatcaggt ttgattattc gttatatgtt tcttgtgtat acctttataa
     1981 gtttaaacgc gaggtgatga atacattatt ggttcaggtg atttcaatgt catggggtgc
     2041 aaggtgcggt agagatggtt tcgttgtagt taaattgcct caagagtcaa gactcgtgaa
     2101 gcctgttgct tataatccag ttggagctat tgatggagcg ggtgacgaaa cccaattaga
     2161 gccattaatg gagtagtagc tgatggccat caagtatcgt gttagatatc acaacaggca
     2221 cgtgacatat tatcacatgg aatgggtgca ttgcaacaat cgttatctat gacaaaatgg
     2281 cagcgtgttg atttgtgcct cgggttcatt aagtaatgta gcaaactaca tggattaaac
     2341 ggcaatggct atgggttaac ttgaacactt cgtgtctcca tctgatgagc gattttacta
     2401 catctaagtg ttgctctctc tctctcgccc acatgcatat tgccattccc gatggacacc
     2461 aagcggaact cagagtcacc acgtgatgtt caaaatttag agacatcaac ggggagaaca
     2521 tctagtggca ttgctgctat gaatatcttg tgaatggaac ctctttaagt gattatagag
     2581 ttcaagtagt ccataatgtt tagctttcat gttttgccaa ccgttcaaat aaagatttga
     2641 tcaacctgtt tagtcttcaa gatcttaaag gatggcgacg cctcatgttt caagttttta
     2701 tagatttctc gtccaaagca ctggtcggca ttgtgatcat tcttgatcac tttacttcgt
     2761 ttgttgttcg ctttttgtgt ggttacttca tttgctttaa gatgtcggct tcaagcaaca
     2821 attccgttcc tgctcatgtt tccccgtctg ccgctcgtcg tgcacgacag cctcgcttga
     2881 gagatcctgt taaatacgac atggctacta tcacccatat gaccagggca tatacgaatg
     2941 agactcgcat tgatgctctt agcgactgta tgcgtgtctt gccgcatacg gaggtgatgg
     3001 atgagattag agctgatatg gatacgttcg ttagcttcaa gcatgggatt gagttcgaga
     3061 ctcggaagcg taatcgagag gtggacacta agttcgaggc tcttgagagc gtggttcgtg
     3121 gtctgaagac ggagttggag caggtgaaag gaaagttgag gaagtatgag actcctgacg
     3181 agcctcatac cggcccagct tatcacaccc gctccaagaa gatgtgatgt gattatatca
     3241 tgagtgatta ttttatttca tggactattt atccttttat acattcattt ttgggtgatg
     3301 tacggcgttt tgccgaggat tttgttatgg gaaattttca t
//
LOCUS       XM_071886508            3488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X10, mRNA.
ACCESSION   XM_071886508
VERSION     XM_071886508.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3488
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2832..3374
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742609.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3141..>3332
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 ggattgctaa ttagaggaaa gaatgatatg gcaagctatc tgtgtaggcc ttatgtttca
      541 agtaatttcg gtgtttagtg ttaatgatat gcaaaatctc aacatatgtc tgatgcccga
      601 atcagtagaa tacggaaaat aatcgcttta tctaagcaaa gattttcatg aaagggatgt
      661 ctagaagtgt aatgggcatc gctttggatt tatcgctttg gagttggtga actttcacat
      721 ggtgggagat tttcatcttc tgtggaccac cccagcaatt acagtagcgg aggactatct
      781 aatcagttct gaactctcat acttaatgtg cagtttgtca ctggtttacc ttcttctgct
      841 atatggaaag attgaaggaa ctgtttgtaa gaggagacct tggtgttgat ttgctggtcg
      901 aaaaggttcc aatagtccag ctaaccaatt tctatttcta tcagcataaa atcggattag
      961 gcatgttggg taacaacata ataattgaaa tggcctacga tgtaactcca tgtgtgacat
     1021 aagagctata cctgagagct aaaggggaat acctgatagt tagacaagaa aaattcaaga
     1081 ttgaccccca tgtaccgggt gaaattcctc atctctgctg tagttgagct ggtgagttgc
     1141 aaataattca tgctgcttta ttataggtag aaaaatcggt gagttggatt aataaatcta
     1201 ctacaagcta ctcataactc agaatcaatt ctccatcctt agcatatcgt cttctatacg
     1261 tgcatgagtt gtagctgaac cagtgtgctt gtggctcttt ttataaaaaa attcaccatt
     1321 ctgagattct gcgtgctgac aataactcaa accatcgagc caaccattct aaaaacaaca
     1381 acaaaaaggc gtgaatgatc agctaacagg ttcttcagaa tcaatattta gggttgggca
     1441 gttgataaca gatgtgcttg ttgagagacc tataaatctt cactatgggc ttggtctctt
     1501 tatagcttta catactgcta tcctttatat attgatattt aaatttcaac tttgttagtc
     1561 caggtacata atatctcatt atttcatctt atttatactt gattgctttg cttgggacaa
     1621 ttttttttta ctgcagttaa cttattacat attgtgtgta atactatttt tcaaattaag
     1681 atgctaacct tgtgatcttg gtgaaaaaac gaagatgcta catggagacc ttgtcaagat
     1741 tatcggtcat ttaatcatgc cacggttctg gataactatc ctattccggt agtagaacat
     1801 atgctagata agttacatgg gttaacgttc ttccttaaaa tcgggcgtta tgtatttgtt
     1861 gttgtcaggt gtcatatttc aaattttttt tttttttttt tttttttaat aaatgcaatc
     1921 tggaagtatg tacaagcatg ttaaattgaa gaatgttagc aaattgttac atttttcaca
     1981 tgtttgcctg tgacaacgga gtatgtgctt acttaacact tgccagttat gagattggtc
     2041 gaagagtgac ctttggaaaa tgagcatgta gttttagcta atcaggtttg attattcgtt
     2101 atatgtttct tgtgtatacc tttataagtt taaacgcgag gtgatgaata cattattggt
     2161 tcaggtgatt tcaatgtcat ggggtgcaag gtgcggtaga gatggtttcg ttgtagttaa
     2221 attgcctcaa gagtcaagac tcgtgaagcc tgttgcttat aatccagttg gagctattga
     2281 tggagcgggt gacgaaaccc aattagagcc attaatggag tagtagctga tggccatcaa
     2341 gtatcgtgtt agatatcaca acaggcacgt gacatattat cacatggaat gggtgcattg
     2401 caacaatcgt tatctatgac aaaatggcag cgtgttgatt tgtgcctcgg gttcattaag
     2461 taatgtagca aactacatgg attaaacggc aatggctatg ggttaacttg aacacttcgt
     2521 gtctccatct gatgagcgat tttactacat ctaagtgttg ctctctctct ctcgcccaca
     2581 tgcatattgc cattcccgat ggacaccaag cggaactcag agtcaccacg tgatgttcaa
     2641 aatttagaga catcaacggg gagaacatct agtggcattg ctgctatgaa tatcttgtga
     2701 atggaacctc tttaagtgat tatagagttc aagtagtcca taatgtttag ctttcatgtt
     2761 ttgccaaccg ttcaaataaa gatttgatca acctgtttag tcttcaagat cttaaaggat
     2821 ggcgacgcct catgtttcaa gtttttatag atttctcgtc caaagcactg gtcggcattg
     2881 tgatcattct tgatcacttt acttcgtttg ttgttcgctt tttgtgtggt tacttcattt
     2941 gctttaagat gtcggcttca agcaacaatt ccgttcctgc tcatgtttcc ccgtctgccg
     3001 ctcgtcgtgc acgacagcct cgcttgagag atcctgttaa atacgacatg gctactatca
     3061 cccatatgac cagggcatat acgaatgaga ctcgcattga tgctcttagc gactgtatgc
     3121 gtgtcttgcc gcatacggag gtgatggatg agattagagc tgatatggat acgttcgtta
     3181 gcttcaagca tgggattgag ttcgagactc ggaagcgtaa tcgagaggtg gacactaagt
     3241 tcgaggctct tgagagcgtg gttcgtggtc tgaagacgga gttggagcag gtgaaaggaa
     3301 agttgaggaa gtatgagact cctgacgagc ctcataccgg cccagcttat cacacccgct
     3361 ccaagaagat gtgatgtgat tatatcatga gtgattattt tatttcatgg actatttatc
     3421 cttttataca ttcatttttg ggtgatgtac ggcgttttgc cgaggatttt gttatgggaa
     3481 attttcat
//
LOCUS       XM_071886509            3444 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X11, mRNA.
ACCESSION   XM_071886509
VERSION     XM_071886509.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3444
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2788..3330
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742610.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3097..>3288
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat atagatatac agattaaagg aaaggagtac
      421 atgatcgtct agagctggat tgctaattag aggaaagaat gatatggcaa gctatctgtg
      481 taggccttat gtttcaagta atttcggtgt ttagtgttaa tgatatgcaa aatctcaaca
      541 tatgtctgat gcccgaatca gtagaatacg gaaaataatc gctttatcta agcaaagatt
      601 ttcatgaaag ggatgtctag aagtgtaatg ggcatcgctt tggatttatc gctttggagt
      661 tggtgaactt tcacatggtg ggagattttc atcttctgtg gaccacccca gcaattacag
      721 tagcggagga ctatctaatc agttctgaac tctcatactt aatgtgcagt ttgtcactgg
      781 tttaccttct tctgctatat ggaaagattg aaggaactgt ttgtaagagg agaccttggt
      841 gttgatttgc tggtcgaaaa ggttccaata gtccagctaa ccaatttcta tttctatcag
      901 cataaaatcg gattaggcat gttgggtaac aacataataa ttgaaatggc ctacgatgta
      961 actccatgtg tgacataaga gctatacctg agagctaaag gggaatacct gatagttaga
     1021 caagaaaaat tcaagattga cccccatgta ccgggtgaaa ttcctcatct ctgctgtagt
     1081 tgagctggtg agttgcaaat aattcatgct gctttattat aggtagaaaa atcggtgagt
     1141 tggattaata aatctactac aagctactca taactcagaa tcaattctcc atccttagca
     1201 tatcgtcttc tatacgtgca tgagttgtag ctgaaccagt gtgcttgtgg ctctttttat
     1261 aaaaaaattc accattctga gattctgcgt gctgacaata actcaaacca tcgagccaac
     1321 cattctaaaa acaacaacaa aaaggcgtga atgatcagct aacaggttct tcagaatcaa
     1381 tatttagggt tgggcagttg ataacagatg tgcttgttga gagacctata aatcttcact
     1441 atgggcttgg tctctttata gctttacata ctgctatcct ttatatattg atatttaaat
     1501 ttcaactttg ttagtccagg tacataatat ctcattattt catcttattt atacttgatt
     1561 gctttgcttg ggacaatttt tttttactgc agttaactta ttacatattg tgtgtaatac
     1621 tatttttcaa attaagatgc taaccttgtg atcttggtga aaaaacgaag atgctacatg
     1681 gagaccttgt caagattatc ggtcatttaa tcatgccacg gttctggata actatcctat
     1741 tccggtagta gaacatatgc tagataagtt acatgggtta acgttcttcc ttaaaatcgg
     1801 gcgttatgta tttgttgttg tcaggtgtca tatttcaaat tttttttttt tttttttttt
     1861 tttaataaat gcaatctgga agtatgtaca agcatgttaa attgaagaat gttagcaaat
     1921 tgttacattt ttcacatgtt tgcctgtgac aacggagtat gtgcttactt aacacttgcc
     1981 agttatgaga ttggtcgaag agtgaccttt ggaaaatgag catgtagttt tagctaatca
     2041 ggtttgatta ttcgttatat gtttcttgtg tataccttta taagtttaaa cgcgaggtga
     2101 tgaatacatt attggttcag gtgatttcaa tgtcatgggg tgcaaggtgc ggtagagatg
     2161 gtttcgttgt agttaaattg cctcaagagt caagactcgt gaagcctgtt gcttataatc
     2221 cagttggagc tattgatgga gcgggtgacg aaacccaatt agagccatta atggagtagt
     2281 agctgatggc catcaagtat cgtgttagat atcacaacag gcacgtgaca tattatcaca
     2341 tggaatgggt gcattgcaac aatcgttatc tatgacaaaa tggcagcgtg ttgatttgtg
     2401 cctcgggttc attaagtaat gtagcaaact acatggatta aacggcaatg gctatgggtt
     2461 aacttgaaca cttcgtgtct ccatctgatg agcgatttta ctacatctaa gtgttgctct
     2521 ctctctctcg cccacatgca tattgccatt cccgatggac accaagcgga actcagagtc
     2581 accacgtgat gttcaaaatt tagagacatc aacggggaga acatctagtg gcattgctgc
     2641 tatgaatatc ttgtgaatgg aacctcttta agtgattata gagttcaagt agtccataat
     2701 gtttagcttt catgttttgc caaccgttca aataaagatt tgatcaacct gtttagtctt
     2761 caagatctta aaggatggcg acgcctcatg tttcaagttt ttatagattt ctcgtccaaa
     2821 gcactggtcg gcattgtgat cattcttgat cactttactt cgtttgttgt tcgctttttg
     2881 tgtggttact tcatttgctt taagatgtcg gcttcaagca acaattccgt tcctgctcat
     2941 gtttccccgt ctgccgctcg tcgtgcacga cagcctcgct tgagagatcc tgttaaatac
     3001 gacatggcta ctatcaccca tatgaccagg gcatatacga atgagactcg cattgatgct
     3061 cttagcgact gtatgcgtgt cttgccgcat acggaggtga tggatgagat tagagctgat
     3121 atggatacgt tcgttagctt caagcatggg attgagttcg agactcggaa gcgtaatcga
     3181 gaggtggaca ctaagttcga ggctcttgag agcgtggttc gtggtctgaa gacggagttg
     3241 gagcaggtga aaggaaagtt gaggaagtat gagactcctg acgagcctca taccggccca
     3301 gcttatcaca cccgctccaa gaagatgtga tgtgattata tcatgagtga ttattttatt
     3361 tcatggacta tttatccttt tatacattca tttttgggtg atgtacggcg ttttgccgag
     3421 gattttgtta tgggaaattt tcat
//
LOCUS       XM_071886510            3405 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X12, mRNA.
ACCESSION   XM_071886510
VERSION     XM_071886510.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3405
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2749..3291
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742611.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3058..>3249
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg cctacgatgt aactccatgt gtgacataag agctatacct gagagctaaa
      961 ggggaatacc tgatagttag acaagaaaaa ttcaagattg acccccatgt accgggtgaa
     1021 attcctcatc tctgctgtag ttgagctggt gagttgcaaa taattcatgc tgctttatta
     1081 taggtagaaa aatcggtgag ttggattaat aaatctacta caagctactc ataactcaga
     1141 atcaattctc catccttagc atatcgtctt ctatacgtgc atgagttgta gctgaaccag
     1201 tgtgcttgtg gctcttttta taaaaaaatt caccattctg agattctgcg tgctgacaat
     1261 aactcaaacc atcgagccaa ccattctaaa aacaacaaca aaaaggcgtg aatgatcagc
     1321 taacaggttc ttcagaatca atatttaggg ttgggcagtt gataacagat gtgcttgttg
     1381 agagacctat aaatcttcac tatgggcttg gtctctttat agctttacat actgctatcc
     1441 tttatatatt gatatttaaa tttcaacttt gttagtccag gtacataata tctcattatt
     1501 tcatcttatt tatacttgat tgctttgctt gggacaattt ttttttactg cagttaactt
     1561 attacatatt gtgtgtaata ctatttttca aattaagatg ctaaccttgt gatcttggtg
     1621 aaaaaacgaa gatgctacat ggagaccttg tcaagattat cggtcattta atcatgccac
     1681 ggttctggat aactatccta ttccggtagt agaacatatg ctagataagt tacatgggtt
     1741 aacgttcttc cttaaaatcg ggcgttatgt atttgttgtt gtcaggtgtc atatttcaaa
     1801 tttttttttt tttttttttt ttttaataaa tgcaatctgg aagtatgtac aagcatgtta
     1861 aattgaagaa tgttagcaaa ttgttacatt tttcacatgt ttgcctgtga caacggagta
     1921 tgtgcttact taacacttgc cagttatgag attggtcgaa gagtgacctt tggaaaatga
     1981 gcatgtagtt ttagctaatc aggtttgatt attcgttata tgtttcttgt gtataccttt
     2041 ataagtttaa acgcgaggtg atgaatacat tattggttca ggtgatttca atgtcatggg
     2101 gtgcaaggtg cggtagagat ggtttcgttg tagttaaatt gcctcaagag tcaagactcg
     2161 tgaagcctgt tgcttataat ccagttggag ctattgatgg agcgggtgac gaaacccaat
     2221 tagagccatt aatggagtag tagctgatgg ccatcaagta tcgtgttaga tatcacaaca
     2281 ggcacgtgac atattatcac atggaatggg tgcattgcaa caatcgttat ctatgacaaa
     2341 atggcagcgt gttgatttgt gcctcgggtt cattaagtaa tgtagcaaac tacatggatt
     2401 aaacggcaat ggctatgggt taacttgaac acttcgtgtc tccatctgat gagcgatttt
     2461 actacatcta agtgttgctc tctctctctc gcccacatgc atattgccat tcccgatgga
     2521 caccaagcgg aactcagagt caccacgtga tgttcaaaat ttagagacat caacggggag
     2581 aacatctagt ggcattgctg ctatgaatat cttgtgaatg gaacctcttt aagtgattat
     2641 agagttcaag tagtccataa tgtttagctt tcatgttttg ccaaccgttc aaataaagat
     2701 ttgatcaacc tgtttagtct tcaagatctt aaaggatggc gacgcctcat gtttcaagtt
     2761 tttatagatt tctcgtccaa agcactggtc ggcattgtga tcattcttga tcactttact
     2821 tcgtttgttg ttcgcttttt gtgtggttac ttcatttgct ttaagatgtc ggcttcaagc
     2881 aacaattccg ttcctgctca tgtttccccg tctgccgctc gtcgtgcacg acagcctcgc
     2941 ttgagagatc ctgttaaata cgacatggct actatcaccc atatgaccag ggcatatacg
     3001 aatgagactc gcattgatgc tcttagcgac tgtatgcgtg tcttgccgca tacggaggtg
     3061 atggatgaga ttagagctga tatggatacg ttcgttagct tcaagcatgg gattgagttc
     3121 gagactcgga agcgtaatcg agaggtggac actaagttcg aggctcttga gagcgtggtt
     3181 cgtggtctga agacggagtt ggagcaggtg aaaggaaagt tgaggaagta tgagactcct
     3241 gacgagcctc ataccggccc agcttatcac acccgctcca agaagatgtg atgtgattat
     3301 atcatgagtg attattttat ttcatggact atttatcctt ttatacattc atttttgggt
     3361 gatgtacggc gttttgccga ggattttgtt atgggaaatt ttcat
//
LOCUS       XM_071886511            3345 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X13, mRNA.
ACCESSION   XM_071886511
VERSION     XM_071886511.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3345
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2689..3231
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742612.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <2998..>3189
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaatttat cgctttggag ttggtgaact ttcacatggt gggagatttt catcttctgt
      601 ggaccacccc agcaattaca gtagcggagg actatctaat cagttctgaa ctctcatact
      661 taatgtgcag tttgtcactg gtttaccttc ttctgctata tggaaagatt gaaggaactg
      721 tttgtaagag gagaccttgg tgttgatttg ctggtcgaaa aggttccaat agtccagcta
      781 accaatttct atttctatca gcataaaatc ggattaggca tgttgggtaa caacataata
      841 attgaaatgg cctacgatgt aactccatgt gtgacataag agctatacct gagagctaaa
      901 ggggaatacc tgatagttag acaagaaaaa ttcaagattg acccccatgt accgggtgaa
      961 attcctcatc tctgctgtag ttgagctggt gagttgcaaa taattcatgc tgctttatta
     1021 taggtagaaa aatcggtgag ttggattaat aaatctacta caagctactc ataactcaga
     1081 atcaattctc catccttagc atatcgtctt ctatacgtgc atgagttgta gctgaaccag
     1141 tgtgcttgtg gctcttttta taaaaaaatt caccattctg agattctgcg tgctgacaat
     1201 aactcaaacc atcgagccaa ccattctaaa aacaacaaca aaaaggcgtg aatgatcagc
     1261 taacaggttc ttcagaatca atatttaggg ttgggcagtt gataacagat gtgcttgttg
     1321 agagacctat aaatcttcac tatgggcttg gtctctttat agctttacat actgctatcc
     1381 tttatatatt gatatttaaa tttcaacttt gttagtccag gtacataata tctcattatt
     1441 tcatcttatt tatacttgat tgctttgctt gggacaattt ttttttactg cagttaactt
     1501 attacatatt gtgtgtaata ctatttttca aattaagatg ctaaccttgt gatcttggtg
     1561 aaaaaacgaa gatgctacat ggagaccttg tcaagattat cggtcattta atcatgccac
     1621 ggttctggat aactatccta ttccggtagt agaacatatg ctagataagt tacatgggtt
     1681 aacgttcttc cttaaaatcg ggcgttatgt atttgttgtt gtcaggtgtc atatttcaaa
     1741 tttttttttt tttttttttt ttttaataaa tgcaatctgg aagtatgtac aagcatgtta
     1801 aattgaagaa tgttagcaaa ttgttacatt tttcacatgt ttgcctgtga caacggagta
     1861 tgtgcttact taacacttgc cagttatgag attggtcgaa gagtgacctt tggaaaatga
     1921 gcatgtagtt ttagctaatc aggtttgatt attcgttata tgtttcttgt gtataccttt
     1981 ataagtttaa acgcgaggtg atgaatacat tattggttca ggtgatttca atgtcatggg
     2041 gtgcaaggtg cggtagagat ggtttcgttg tagttaaatt gcctcaagag tcaagactcg
     2101 tgaagcctgt tgcttataat ccagttggag ctattgatgg agcgggtgac gaaacccaat
     2161 tagagccatt aatggagtag tagctgatgg ccatcaagta tcgtgttaga tatcacaaca
     2221 ggcacgtgac atattatcac atggaatggg tgcattgcaa caatcgttat ctatgacaaa
     2281 atggcagcgt gttgatttgt gcctcgggtt cattaagtaa tgtagcaaac tacatggatt
     2341 aaacggcaat ggctatgggt taacttgaac acttcgtgtc tccatctgat gagcgatttt
     2401 actacatcta agtgttgctc tctctctctc gcccacatgc atattgccat tcccgatgga
     2461 caccaagcgg aactcagagt caccacgtga tgttcaaaat ttagagacat caacggggag
     2521 aacatctagt ggcattgctg ctatgaatat cttgtgaatg gaacctcttt aagtgattat
     2581 agagttcaag tagtccataa tgtttagctt tcatgttttg ccaaccgttc aaataaagat
     2641 ttgatcaacc tgtttagtct tcaagatctt aaaggatggc gacgcctcat gtttcaagtt
     2701 tttatagatt tctcgtccaa agcactggtc ggcattgtga tcattcttga tcactttact
     2761 tcgtttgttg ttcgcttttt gtgtggttac ttcatttgct ttaagatgtc ggcttcaagc
     2821 aacaattccg ttcctgctca tgtttccccg tctgccgctc gtcgtgcacg acagcctcgc
     2881 ttgagagatc ctgttaaata cgacatggct actatcaccc atatgaccag ggcatatacg
     2941 aatgagactc gcattgatgc tcttagcgac tgtatgcgtg tcttgccgca tacggaggtg
     3001 atggatgaga ttagagctga tatggatacg ttcgttagct tcaagcatgg gattgagttc
     3061 gagactcgga agcgtaatcg agaggtggac actaagttcg aggctcttga gagcgtggtt
     3121 cgtggtctga agacggagtt ggagcaggtg aaaggaaagt tgaggaagta tgagactcct
     3181 gacgagcctc ataccggccc agcttatcac acccgctcca agaagatgtg atgtgattat
     3241 atcatgagtg attattttat ttcatggact atttatcctt ttatacattc atttttgggt
     3301 gatgtacggc gttttgccga ggattttgtt atgggaaatt ttcat
//
LOCUS       XM_071886512            3424 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X14, mRNA.
ACCESSION   XM_071886512
VERSION     XM_071886512.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3424
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3424
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2768..3310
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742613.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3077..>3268
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtagaaaa atcggtgagt tggattaata aatctactac
     1141 aagctactca taactcagaa tcaattctcc atccttagca tatcgtcttc tatacgtgca
     1201 tgagttgtag ctgaaccagt gtgcttgtgg ctctttttat aaaaaaattc accattctga
     1261 gattctgcgt gctgacaata actcaaacca tcgagccaac cattctaaaa acaacaacaa
     1321 aaaggcgtga atgatcagct aacaggttct tcagaatcaa tatttagggt tgggcagttg
     1381 ataacagatg tgcttgttga gagacctata aatcttcact atgggcttgg tctctttata
     1441 gctttacata ctgctatcct ttatatattg atatttaaat ttcaactttg ttagtccagg
     1501 tacataatat ctcattattt catcttattt atacttgatt gctttgcttg ggacaatttt
     1561 tttttactgc agttaactta ttacatattg tgtgtaatac tatttttcaa attaagatgc
     1621 taaccttgtg atcttggtga aaaaacgaag atgctacatg gagaccttgt caagattatc
     1681 ggtcatttaa tcatgccacg gttctggata actatcctat tccggtagta gaacatatgc
     1741 tagataagtt acatgggtta acgttcttcc ttaaaatcgg gcgttatgta tttgttgttg
     1801 tcaggtgtca tatttcaaat tttttttttt tttttttttt tttaataaat gcaatctgga
     1861 agtatgtaca agcatgttaa attgaagaat gttagcaaat tgttacattt ttcacatgtt
     1921 tgcctgtgac aacggagtat gtgcttactt aacacttgcc agttatgaga ttggtcgaag
     1981 agtgaccttt ggaaaatgag catgtagttt tagctaatca ggtttgatta ttcgttatat
     2041 gtttcttgtg tataccttta taagtttaaa cgcgaggtga tgaatacatt attggttcag
     2101 gtgatttcaa tgtcatgggg tgcaaggtgc ggtagagatg gtttcgttgt agttaaattg
     2161 cctcaagagt caagactcgt gaagcctgtt gcttataatc cagttggagc tattgatgga
     2221 gcgggtgacg aaacccaatt agagccatta atggagtagt agctgatggc catcaagtat
     2281 cgtgttagat atcacaacag gcacgtgaca tattatcaca tggaatgggt gcattgcaac
     2341 aatcgttatc tatgacaaaa tggcagcgtg ttgatttgtg cctcgggttc attaagtaat
     2401 gtagcaaact acatggatta aacggcaatg gctatgggtt aacttgaaca cttcgtgtct
     2461 ccatctgatg agcgatttta ctacatctaa gtgttgctct ctctctctcg cccacatgca
     2521 tattgccatt cccgatggac accaagcgga actcagagtc accacgtgat gttcaaaatt
     2581 tagagacatc aacggggaga acatctagtg gcattgctgc tatgaatatc ttgtgaatgg
     2641 aacctcttta agtgattata gagttcaagt agtccataat gtttagcttt catgttttgc
     2701 caaccgttca aataaagatt tgatcaacct gtttagtctt caagatctta aaggatggcg
     2761 acgcctcatg tttcaagttt ttatagattt ctcgtccaaa gcactggtcg gcattgtgat
     2821 cattcttgat cactttactt cgtttgttgt tcgctttttg tgtggttact tcatttgctt
     2881 taagatgtcg gcttcaagca acaattccgt tcctgctcat gtttccccgt ctgccgctcg
     2941 tcgtgcacga cagcctcgct tgagagatcc tgttaaatac gacatggcta ctatcaccca
     3001 tatgaccagg gcatatacga atgagactcg cattgatgct cttagcgact gtatgcgtgt
     3061 cttgccgcat acggaggtga tggatgagat tagagctgat atggatacgt tcgttagctt
     3121 caagcatggg attgagttcg agactcggaa gcgtaatcga gaggtggaca ctaagttcga
     3181 ggctcttgag agcgtggttc gtggtctgaa gacggagttg gagcaggtga aaggaaagtt
     3241 gaggaagtat gagactcctg acgagcctca taccggccca gcttatcaca cccgctccaa
     3301 gaagatgtga tgtgattata tcatgagtga ttattttatt tcatggacta tttatccttt
     3361 tatacattca tttttgggtg atgtacggcg ttttgccgag gattttgtta tgggaaattt
     3421 tcat
//
LOCUS       XM_071886513            3381 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X15, mRNA.
ACCESSION   XM_071886513
VERSION     XM_071886513.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3381
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3381
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2725..3267
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742614.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3034..>3225
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctgcatat
     1141 cgtcttctat acgtgcatga gttgtagctg aaccagtgtg cttgtggctc tttttataaa
     1201 aaaattcacc attctgagat tctgcgtgct gacaataact caaaccatcg agccaaccat
     1261 tctaaaaaca acaacaaaaa ggcgtgaatg atcagctaac aggttcttca gaatcaatat
     1321 ttagggttgg gcagttgata acagatgtgc ttgttgagag acctataaat cttcactatg
     1381 ggcttggtct ctttatagct ttacatactg ctatccttta tatattgata tttaaatttc
     1441 aactttgtta gtccaggtac ataatatctc attatttcat cttatttata cttgattgct
     1501 ttgcttggga caattttttt ttactgcagt taacttatta catattgtgt gtaatactat
     1561 ttttcaaatt aagatgctaa ccttgtgatc ttggtgaaaa aacgaagatg ctacatggag
     1621 accttgtcaa gattatcggt catttaatca tgccacggtt ctggataact atcctattcc
     1681 ggtagtagaa catatgctag ataagttaca tgggttaacg ttcttcctta aaatcgggcg
     1741 ttatgtattt gttgttgtca ggtgtcatat ttcaaatttt tttttttttt tttttttttt
     1801 aataaatgca atctggaagt atgtacaagc atgttaaatt gaagaatgtt agcaaattgt
     1861 tacatttttc acatgtttgc ctgtgacaac ggagtatgtg cttacttaac acttgccagt
     1921 tatgagattg gtcgaagagt gacctttgga aaatgagcat gtagttttag ctaatcaggt
     1981 ttgattattc gttatatgtt tcttgtgtat acctttataa gtttaaacgc gaggtgatga
     2041 atacattatt ggttcaggtg atttcaatgt catggggtgc aaggtgcggt agagatggtt
     2101 tcgttgtagt taaattgcct caagagtcaa gactcgtgaa gcctgttgct tataatccag
     2161 ttggagctat tgatggagcg ggtgacgaaa cccaattaga gccattaatg gagtagtagc
     2221 tgatggccat caagtatcgt gttagatatc acaacaggca cgtgacatat tatcacatgg
     2281 aatgggtgca ttgcaacaat cgttatctat gacaaaatgg cagcgtgttg atttgtgcct
     2341 cgggttcatt aagtaatgta gcaaactaca tggattaaac ggcaatggct atgggttaac
     2401 ttgaacactt cgtgtctcca tctgatgagc gattttacta catctaagtg ttgctctctc
     2461 tctctcgccc acatgcatat tgccattccc gatggacacc aagcggaact cagagtcacc
     2521 acgtgatgtt caaaatttag agacatcaac ggggagaaca tctagtggca ttgctgctat
     2581 gaatatcttg tgaatggaac ctctttaagt gattatagag ttcaagtagt ccataatgtt
     2641 tagctttcat gttttgccaa ccgttcaaat aaagatttga tcaacctgtt tagtcttcaa
     2701 gatcttaaag gatggcgacg cctcatgttt caagttttta tagatttctc gtccaaagca
     2761 ctggtcggca ttgtgatcat tcttgatcac tttacttcgt ttgttgttcg ctttttgtgt
     2821 ggttacttca tttgctttaa gatgtcggct tcaagcaaca attccgttcc tgctcatgtt
     2881 tccccgtctg ccgctcgtcg tgcacgacag cctcgcttga gagatcctgt taaatacgac
     2941 atggctacta tcacccatat gaccagggca tatacgaatg agactcgcat tgatgctctt
     3001 agcgactgta tgcgtgtctt gccgcatacg gaggtgatgg atgagattag agctgatatg
     3061 gatacgttcg ttagcttcaa gcatgggatt gagttcgaga ctcggaagcg taatcgagag
     3121 gtggacacta agttcgaggc tcttgagagc gtggttcgtg gtctgaagac ggagttggag
     3181 caggtgaaag gaaagttgag gaagtatgag actcctgacg agcctcatac cggcccagct
     3241 tatcacaccc gctccaagaa gatgtgatgt gattatatca tgagtgatta ttttatttca
     3301 tggactattt atccttttat acattcattt ttgggtgatg tacggcgttt tgccgaggat
     3361 tttgttatgg gaaattttca t
//
LOCUS       XM_071886514            3188 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X16, mRNA.
ACCESSION   XM_071886514
VERSION     XM_071886514.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3188
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3188
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2532..3074
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742615.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <2841..>3032
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagtt tatcgctttg gagttggtga actttcacat
      421 ggtgggagat tttcatcttc tgtggaccac cccagcaatt acagtagcgg aggactatct
      481 aatcagttct gaactctcat acttaatgtg cagtttgtca ctggtttacc ttcttctgct
      541 atatggaaag attgaaggaa ctgtttgtaa gaggagacct tggtgttgat ttgctggtcg
      601 aaaaggttcc aatagtccag ctaaccaatt tctatttcta tcagcataaa atcggattag
      661 gcatgttggg taacaacata ataattgaaa tggcctacga tgtaactcca tgtgtgacat
      721 aagagctata cctgagagct aaaggggaat acctgatagt tagacaagaa aaattcaaga
      781 ttgaccccca tgtaccgggt gaaattcctc atctctgctg tagttgagct ggtgagttgc
      841 aaataattca tgctgcttta ttataggtag aaaaatcggt gagttggatt aataaatcta
      901 ctacaagcta ctcataactc agaatcaatt ctccatcctt agcatatcgt cttctatacg
      961 tgcatgagtt gtagctgaac cagtgtgctt gtggctcttt ttataaaaaa attcaccatt
     1021 ctgagattct gcgtgctgac aataactcaa accatcgagc caaccattct aaaaacaaca
     1081 acaaaaaggc gtgaatgatc agctaacagg ttcttcagaa tcaatattta gggttgggca
     1141 gttgataaca gatgtgcttg ttgagagacc tataaatctt cactatgggc ttggtctctt
     1201 tatagcttta catactgcta tcctttatat attgatattt aaatttcaac tttgttagtc
     1261 caggtacata atatctcatt atttcatctt atttatactt gattgctttg cttgggacaa
     1321 ttttttttta ctgcagttaa cttattacat attgtgtgta atactatttt tcaaattaag
     1381 atgctaacct tgtgatcttg gtgaaaaaac gaagatgcta catggagacc ttgtcaagat
     1441 tatcggtcat ttaatcatgc cacggttctg gataactatc ctattccggt agtagaacat
     1501 atgctagata agttacatgg gttaacgttc ttccttaaaa tcgggcgtta tgtatttgtt
     1561 gttgtcaggt gtcatatttc aaattttttt tttttttttt tttttttaat aaatgcaatc
     1621 tggaagtatg tacaagcatg ttaaattgaa gaatgttagc aaattgttac atttttcaca
     1681 tgtttgcctg tgacaacgga gtatgtgctt acttaacact tgccagttat gagattggtc
     1741 gaagagtgac ctttggaaaa tgagcatgta gttttagcta atcaggtttg attattcgtt
     1801 atatgtttct tgtgtatacc tttataagtt taaacgcgag gtgatgaata cattattggt
     1861 tcaggtgatt tcaatgtcat ggggtgcaag gtgcggtaga gatggtttcg ttgtagttaa
     1921 attgcctcaa gagtcaagac tcgtgaagcc tgttgcttat aatccagttg gagctattga
     1981 tggagcgggt gacgaaaccc aattagagcc attaatggag tagtagctga tggccatcaa
     2041 gtatcgtgtt agatatcaca acaggcacgt gacatattat cacatggaat gggtgcattg
     2101 caacaatcgt tatctatgac aaaatggcag cgtgttgatt tgtgcctcgg gttcattaag
     2161 taatgtagca aactacatgg attaaacggc aatggctatg ggttaacttg aacacttcgt
     2221 gtctccatct gatgagcgat tttactacat ctaagtgttg ctctctctct ctcgcccaca
     2281 tgcatattgc cattcccgat ggacaccaag cggaactcag agtcaccacg tgatgttcaa
     2341 aatttagaga catcaacggg gagaacatct agtggcattg ctgctatgaa tatcttgtga
     2401 atggaacctc tttaagtgat tatagagttc aagtagtcca taatgtttag ctttcatgtt
     2461 ttgccaaccg ttcaaataaa gatttgatca acctgtttag tcttcaagat cttaaaggat
     2521 ggcgacgcct catgtttcaa gtttttatag atttctcgtc caaagcactg gtcggcattg
     2581 tgatcattct tgatcacttt acttcgtttg ttgttcgctt tttgtgtggt tacttcattt
     2641 gctttaagat gtcggcttca agcaacaatt ccgttcctgc tcatgtttcc ccgtctgccg
     2701 ctcgtcgtgc acgacagcct cgcttgagag atcctgttaa atacgacatg gctactatca
     2761 cccatatgac cagggcatat acgaatgaga ctcgcattga tgctcttagc gactgtatgc
     2821 gtgtcttgcc gcatacggag gtgatggatg agattagagc tgatatggat acgttcgtta
     2881 gcttcaagca tgggattgag ttcgagactc ggaagcgtaa tcgagaggtg gacactaagt
     2941 tcgaggctct tgagagcgtg gttcgtggtc tgaagacgga gttggagcag gtgaaaggaa
     3001 agttgaggaa gtatgagact cctgacgagc ctcataccgg cccagcttat cacacccgct
     3061 ccaagaagat gtgatgtgat tatatcatga gtgattattt tatttcatgg actatttatc
     3121 cttttataca ttcatttttg ggtgatgtac ggcgttttgc cgaggatttt gttatgggaa
     3181 attttcat
//
LOCUS       XM_071886515            3349 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X17, mRNA.
ACCESSION   XM_071886515
VERSION     XM_071886515.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3349
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3349
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2693..3235
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742616.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <3002..>3193
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctgctgaa
     1141 ccagtgtgct tgtggctctt tttataaaaa aattcaccat tctgagattc tgcgtgctga
     1201 caataactca aaccatcgag ccaaccattc taaaaacaac aacaaaaagg cgtgaatgat
     1261 cagctaacag gttcttcaga atcaatattt agggttgggc agttgataac agatgtgctt
     1321 gttgagagac ctataaatct tcactatggg cttggtctct ttatagcttt acatactgct
     1381 atcctttata tattgatatt taaatttcaa ctttgttagt ccaggtacat aatatctcat
     1441 tatttcatct tatttatact tgattgcttt gcttgggaca attttttttt actgcagtta
     1501 acttattaca tattgtgtgt aatactattt ttcaaattaa gatgctaacc ttgtgatctt
     1561 ggtgaaaaaa cgaagatgct acatggagac cttgtcaaga ttatcggtca tttaatcatg
     1621 ccacggttct ggataactat cctattccgg tagtagaaca tatgctagat aagttacatg
     1681 ggttaacgtt cttccttaaa atcgggcgtt atgtatttgt tgttgtcagg tgtcatattt
     1741 caaatttttt tttttttttt ttttttttaa taaatgcaat ctggaagtat gtacaagcat
     1801 gttaaattga agaatgttag caaattgtta catttttcac atgtttgcct gtgacaacgg
     1861 agtatgtgct tacttaacac ttgccagtta tgagattggt cgaagagtga cctttggaaa
     1921 atgagcatgt agttttagct aatcaggttt gattattcgt tatatgtttc ttgtgtatac
     1981 ctttataagt ttaaacgcga ggtgatgaat acattattgg ttcaggtgat ttcaatgtca
     2041 tggggtgcaa ggtgcggtag agatggtttc gttgtagtta aattgcctca agagtcaaga
     2101 ctcgtgaagc ctgttgctta taatccagtt ggagctattg atggagcggg tgacgaaacc
     2161 caattagagc cattaatgga gtagtagctg atggccatca agtatcgtgt tagatatcac
     2221 aacaggcacg tgacatatta tcacatggaa tgggtgcatt gcaacaatcg ttatctatga
     2281 caaaatggca gcgtgttgat ttgtgcctcg ggttcattaa gtaatgtagc aaactacatg
     2341 gattaaacgg caatggctat gggttaactt gaacacttcg tgtctccatc tgatgagcga
     2401 ttttactaca tctaagtgtt gctctctctc tctcgcccac atgcatattg ccattcccga
     2461 tggacaccaa gcggaactca gagtcaccac gtgatgttca aaatttagag acatcaacgg
     2521 ggagaacatc tagtggcatt gctgctatga atatcttgtg aatggaacct ctttaagtga
     2581 ttatagagtt caagtagtcc ataatgttta gctttcatgt tttgccaacc gttcaaataa
     2641 agatttgatc aacctgttta gtcttcaaga tcttaaagga tggcgacgcc tcatgtttca
     2701 agtttttata gatttctcgt ccaaagcact ggtcggcatt gtgatcattc ttgatcactt
     2761 tacttcgttt gttgttcgct ttttgtgtgg ttacttcatt tgctttaaga tgtcggcttc
     2821 aagcaacaat tccgttcctg ctcatgtttc cccgtctgcc gctcgtcgtg cacgacagcc
     2881 tcgcttgaga gatcctgtta aatacgacat ggctactatc acccatatga ccagggcata
     2941 tacgaatgag actcgcattg atgctcttag cgactgtatg cgtgtcttgc cgcatacgga
     3001 ggtgatggat gagattagag ctgatatgga tacgttcgtt agcttcaagc atgggattga
     3061 gttcgagact cggaagcgta atcgagaggt ggacactaag ttcgaggctc ttgagagcgt
     3121 ggttcgtggt ctgaagacgg agttggagca ggtgaaagga aagttgagga agtatgagac
     3181 tcctgacgag cctcataccg gcccagctta tcacacccgc tccaagaaga tgtgatgtga
     3241 ttatatcatg agtgattatt ttatttcatg gactatttat ccttttatac attcattttt
     3301 gggtgatgta cggcgttttg ccgaggattt tgttatggga aattttcat
//
LOCUS       XM_071886516            3158 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X18, mRNA.
ACCESSION   XM_071886516
VERSION     XM_071886516.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3158
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3158
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2502..3044
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742617.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <2811..>3002
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctgagacc
     1141 tataaatctt cactatgggc ttggtctctt tatagcttta catactgcta tcctttatat
     1201 attgatattt aaatttcaac tttgttagtc caggtacata atatctcatt atttcatctt
     1261 atttatactt gattgctttg cttgggacaa ttttttttta ctgcagttaa cttattacat
     1321 attgtgtgta atactatttt tcaaattaag atgctaacct tgtgatcttg gtgaaaaaac
     1381 gaagatgcta catggagacc ttgtcaagat tatcggtcat ttaatcatgc cacggttctg
     1441 gataactatc ctattccggt agtagaacat atgctagata agttacatgg gttaacgttc
     1501 ttccttaaaa tcgggcgtta tgtatttgtt gttgtcaggt gtcatatttc aaattttttt
     1561 tttttttttt tttttttaat aaatgcaatc tggaagtatg tacaagcatg ttaaattgaa
     1621 gaatgttagc aaattgttac atttttcaca tgtttgcctg tgacaacgga gtatgtgctt
     1681 acttaacact tgccagttat gagattggtc gaagagtgac ctttggaaaa tgagcatgta
     1741 gttttagcta atcaggtttg attattcgtt atatgtttct tgtgtatacc tttataagtt
     1801 taaacgcgag gtgatgaata cattattggt tcaggtgatt tcaatgtcat ggggtgcaag
     1861 gtgcggtaga gatggtttcg ttgtagttaa attgcctcaa gagtcaagac tcgtgaagcc
     1921 tgttgcttat aatccagttg gagctattga tggagcgggt gacgaaaccc aattagagcc
     1981 attaatggag tagtagctga tggccatcaa gtatcgtgtt agatatcaca acaggcacgt
     2041 gacatattat cacatggaat gggtgcattg caacaatcgt tatctatgac aaaatggcag
     2101 cgtgttgatt tgtgcctcgg gttcattaag taatgtagca aactacatgg attaaacggc
     2161 aatggctatg ggttaacttg aacacttcgt gtctccatct gatgagcgat tttactacat
     2221 ctaagtgttg ctctctctct ctcgcccaca tgcatattgc cattcccgat ggacaccaag
     2281 cggaactcag agtcaccacg tgatgttcaa aatttagaga catcaacggg gagaacatct
     2341 agtggcattg ctgctatgaa tatcttgtga atggaacctc tttaagtgat tatagagttc
     2401 aagtagtcca taatgtttag ctttcatgtt ttgccaaccg ttcaaataaa gatttgatca
     2461 acctgtttag tcttcaagat cttaaaggat ggcgacgcct catgtttcaa gtttttatag
     2521 atttctcgtc caaagcactg gtcggcattg tgatcattct tgatcacttt acttcgtttg
     2581 ttgttcgctt tttgtgtggt tacttcattt gctttaagat gtcggcttca agcaacaatt
     2641 ccgttcctgc tcatgtttcc ccgtctgccg ctcgtcgtgc acgacagcct cgcttgagag
     2701 atcctgttaa atacgacatg gctactatca cccatatgac cagggcatat acgaatgaga
     2761 ctcgcattga tgctcttagc gactgtatgc gtgtcttgcc gcatacggag gtgatggatg
     2821 agattagagc tgatatggat acgttcgtta gcttcaagca tgggattgag ttcgagactc
     2881 ggaagcgtaa tcgagaggtg gacactaagt tcgaggctct tgagagcgtg gttcgtggtc
     2941 tgaagacgga gttggagcag gtgaaaggaa agttgaggaa gtatgagact cctgacgagc
     3001 ctcataccgg cccagcttat cacacccgct ccaagaagat gtgatgtgat tatatcatga
     3061 gtgattattt tatttcatgg actatttatc cttttataca ttcatttttg ggtgatgtac
     3121 ggcgttttgc cgaggatttt gttatgggaa attttcat
//
LOCUS       XM_071886517            2897 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X19, mRNA.
ACCESSION   XM_071886517
VERSION     XM_071886517.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2897
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2897
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2241..2783
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742618.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <2550..>2741
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagaa gtttttgaca ggcctacgat gtaactccat
      421 gtgtgacata agagctatac ctgagagcta aaggggaata cctgatagtt agacaagaaa
      481 aattcaagat tgacccccat gtaccgggtg aaattcctca tctctgctgt agttgagctg
      541 gtgagttgca aataattcat gctgctttat tataggtaga aaaatcggtg agttggatta
      601 ataaatctac tacaagctac tcataactca gaatcaattc tccatcctta gcatatcgtc
      661 ttctatacgt gcatgagttg tagctgaacc agtgtgcttg tggctctttt tataaaaaaa
      721 ttcaccattc tgagattctg cgtgctgaca ataactcaaa ccatcgagcc aaccattcta
      781 aaaacaacaa caaaaaggcg tgaatgatca gctaacaggt tcttcagaat caatatttag
      841 ggttgggcag ttgataacag atgtgcttgt tgagagacct ataaatcttc actatgggct
      901 tggtctcttt atagctttac atactgctat cctttatata ttgatattta aatttcaact
      961 ttgttagtcc aggtacataa tatctcatta tttcatctta tttatacttg attgctttgc
     1021 ttgggacaat ttttttttac tgcagttaac ttattacata ttgtgtgtaa tactattttt
     1081 caaattaaga tgctaacctt gtgatcttgg tgaaaaaacg aagatgctac atggagacct
     1141 tgtcaagatt atcggtcatt taatcatgcc acggttctgg ataactatcc tattccggta
     1201 gtagaacata tgctagataa gttacatggg ttaacgttct tccttaaaat cgggcgttat
     1261 gtatttgttg ttgtcaggtg tcatatttca aatttttttt tttttttttt ttttttaata
     1321 aatgcaatct ggaagtatgt acaagcatgt taaattgaag aatgttagca aattgttaca
     1381 tttttcacat gtttgcctgt gacaacggag tatgtgctta cttaacactt gccagttatg
     1441 agattggtcg aagagtgacc tttggaaaat gagcatgtag ttttagctaa tcaggtttga
     1501 ttattcgtta tatgtttctt gtgtatacct ttataagttt aaacgcgagg tgatgaatac
     1561 attattggtt caggtgattt caatgtcatg gggtgcaagg tgcggtagag atggtttcgt
     1621 tgtagttaaa ttgcctcaag agtcaagact cgtgaagcct gttgcttata atccagttgg
     1681 agctattgat ggagcgggtg acgaaaccca attagagcca ttaatggagt agtagctgat
     1741 ggccatcaag tatcgtgtta gatatcacaa caggcacgtg acatattatc acatggaatg
     1801 ggtgcattgc aacaatcgtt atctatgaca aaatggcagc gtgttgattt gtgcctcggg
     1861 ttcattaagt aatgtagcaa actacatgga ttaaacggca atggctatgg gttaacttga
     1921 acacttcgtg tctccatctg atgagcgatt ttactacatc taagtgttgc tctctctctc
     1981 tcgcccacat gcatattgcc attcccgatg gacaccaagc ggaactcaga gtcaccacgt
     2041 gatgttcaaa atttagagac atcaacgggg agaacatcta gtggcattgc tgctatgaat
     2101 atcttgtgaa tggaacctct ttaagtgatt atagagttca agtagtccat aatgtttagc
     2161 tttcatgttt tgccaaccgt tcaaataaag atttgatcaa cctgtttagt cttcaagatc
     2221 ttaaaggatg gcgacgcctc atgtttcaag tttttataga tttctcgtcc aaagcactgg
     2281 tcggcattgt gatcattctt gatcacttta cttcgtttgt tgttcgcttt ttgtgtggtt
     2341 acttcatttg ctttaagatg tcggcttcaa gcaacaattc cgttcctgct catgtttccc
     2401 cgtctgccgc tcgtcgtgca cgacagcctc gcttgagaga tcctgttaaa tacgacatgg
     2461 ctactatcac ccatatgacc agggcatata cgaatgagac tcgcattgat gctcttagcg
     2521 actgtatgcg tgtcttgccg catacggagg tgatggatga gattagagct gatatggata
     2581 cgttcgttag cttcaagcat gggattgagt tcgagactcg gaagcgtaat cgagaggtgg
     2641 acactaagtt cgaggctctt gagagcgtgg ttcgtggtct gaagacggag ttggagcagg
     2701 tgaaaggaaa gttgaggaag tatgagactc ctgacgagcc tcataccggc ccagcttatc
     2761 acacccgctc caagaagatg tgatgtgatt atatcatgag tgattatttt atttcatgga
     2821 ctatttatcc ttttatacat tcatttttgg gtgatgtacg gcgttttgcc gaggattttg
     2881 ttatgggaaa ttttcat
//
LOCUS       XM_071886518            2884 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X20, mRNA.
ACCESSION   XM_071886518
VERSION     XM_071886518.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2884
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2228..2770
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742619.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALVGIVIILDHFTSFVVRFLCGYFICFKMSASS
                     NNSVPAHVSPSAARRARQPRLRDPVKYDMATITHMTRAYTNETRIDALSDCMRVLPHT
                     EVMDEIRADMDTFVSFKHGIEFETRKRNREVDTKFEALESVVRGLKTELEQVKGKLRK
                     YETPDEPHTGPAYHTRSKKM"
     misc_feature    <2537..>2728
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaaggc ctacgatgta actccatgtg tgacataaga
      421 gctatacctg agagctaaag gggaatacct gatagttaga caagaaaaat tcaagattga
      481 cccccatgta ccgggtgaaa ttcctcatct ctgctgtagt tgagctggtg agttgcaaat
      541 aattcatgct gctttattat aggtagaaaa atcggtgagt tggattaata aatctactac
      601 aagctactca taactcagaa tcaattctcc atccttagca tatcgtcttc tatacgtgca
      661 tgagttgtag ctgaaccagt gtgcttgtgg ctctttttat aaaaaaattc accattctga
      721 gattctgcgt gctgacaata actcaaacca tcgagccaac cattctaaaa acaacaacaa
      781 aaaggcgtga atgatcagct aacaggttct tcagaatcaa tatttagggt tgggcagttg
      841 ataacagatg tgcttgttga gagacctata aatcttcact atgggcttgg tctctttata
      901 gctttacata ctgctatcct ttatatattg atatttaaat ttcaactttg ttagtccagg
      961 tacataatat ctcattattt catcttattt atacttgatt gctttgcttg ggacaatttt
     1021 tttttactgc agttaactta ttacatattg tgtgtaatac tatttttcaa attaagatgc
     1081 taaccttgtg atcttggtga aaaaacgaag atgctacatg gagaccttgt caagattatc
     1141 ggtcatttaa tcatgccacg gttctggata actatcctat tccggtagta gaacatatgc
     1201 tagataagtt acatgggtta acgttcttcc ttaaaatcgg gcgttatgta tttgttgttg
     1261 tcaggtgtca tatttcaaat tttttttttt tttttttttt tttaataaat gcaatctgga
     1321 agtatgtaca agcatgttaa attgaagaat gttagcaaat tgttacattt ttcacatgtt
     1381 tgcctgtgac aacggagtat gtgcttactt aacacttgcc agttatgaga ttggtcgaag
     1441 agtgaccttt ggaaaatgag catgtagttt tagctaatca ggtttgatta ttcgttatat
     1501 gtttcttgtg tataccttta taagtttaaa cgcgaggtga tgaatacatt attggttcag
     1561 gtgatttcaa tgtcatgggg tgcaaggtgc ggtagagatg gtttcgttgt agttaaattg
     1621 cctcaagagt caagactcgt gaagcctgtt gcttataatc cagttggagc tattgatgga
     1681 gcgggtgacg aaacccaatt agagccatta atggagtagt agctgatggc catcaagtat
     1741 cgtgttagat atcacaacag gcacgtgaca tattatcaca tggaatgggt gcattgcaac
     1801 aatcgttatc tatgacaaaa tggcagcgtg ttgatttgtg cctcgggttc attaagtaat
     1861 gtagcaaact acatggatta aacggcaatg gctatgggtt aacttgaaca cttcgtgtct
     1921 ccatctgatg agcgatttta ctacatctaa gtgttgctct ctctctctcg cccacatgca
     1981 tattgccatt cccgatggac accaagcgga actcagagtc accacgtgat gttcaaaatt
     2041 tagagacatc aacggggaga acatctagtg gcattgctgc tatgaatatc ttgtgaatgg
     2101 aacctcttta agtgattata gagttcaagt agtccataat gtttagcttt catgttttgc
     2161 caaccgttca aataaagatt tgatcaacct gtttagtctt caagatctta aaggatggcg
     2221 acgcctcatg tttcaagttt ttatagattt ctcgtccaaa gcactggtcg gcattgtgat
     2281 cattcttgat cactttactt cgtttgttgt tcgctttttg tgtggttact tcatttgctt
     2341 taagatgtcg gcttcaagca acaattccgt tcctgctcat gtttccccgt ctgccgctcg
     2401 tcgtgcacga cagcctcgct tgagagatcc tgttaaatac gacatggcta ctatcaccca
     2461 tatgaccagg gcatatacga atgagactcg cattgatgct cttagcgact gtatgcgtgt
     2521 cttgccgcat acggaggtga tggatgagat tagagctgat atggatacgt tcgttagctt
     2581 caagcatggg attgagttcg agactcggaa gcgtaatcga gaggtggaca ctaagttcga
     2641 ggctcttgag agcgtggttc gtggtctgaa gacggagttg gagcaggtga aaggaaagtt
     2701 gaggaagtat gagactcctg acgagcctca taccggccca gcttatcaca cccgctccaa
     2761 gaagatgtga tgtgattata tcatgagtga ttattttatt tcatggacta tttatccttt
     2821 tatacattca tttttgggtg atgtacggcg ttttgccgag gattttgtta tgggaaattt
     2881 tcat
//
LOCUS       XM_071886519            3414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904582), transcript variant X21, mRNA.
ACCESSION   XM_071886519
VERSION     XM_071886519.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3414
                     /gene="LOC139904582"
                     /note="uncharacterized LOC139904582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904582"
     CDS             2836..3300
                     /gene="LOC139904582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742620.1"
                     /db_xref="GeneID:139904582"
                     /translation="MFQVFIDFSSKALMSASSNNSVPAHVSPSAARRARQPRLRDPVK
                     YDMATITHMTRAYTNETRIDALSDCMRVLPHTEVMDEIRADMDTFVSFKHGIEFETRK
                     RNREVDTKFEALESVVRGLKTELEQVKGKLRKYETPDEPHTGPAYHTRSKKM"
     misc_feature    <3067..>3258
                     /gene="LOC139904582"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; Region: NIP100;
                     COG5244"
                     /db_xref="CDD:227569"
ORIGIN      
        1 agtaacttca tcgttcaatt caacccaaaa taaataaatt ggtaaatcct ttccatcaat
       61 cgctactttt aatcacttct tacgataatc agtttcacta atgctaacaa ccaaaaaact
      121 gaaaattccc aaccctttaa atccttactg ttcatcgtcg ttaacccaaa tagtcgattc
      181 tgttacacac tcaattgaaa ggatttgtaa tcagtgagca aatcgtgaac cgcttctcga
      241 aattagggtt ttgattcatc gacttttttg agtgagatgg atttcgacga attagctttt
      301 ggattcatag accgattgta agcatatcag ttgtatatga tttgttcatc aacatcaatt
      361 atctattgga atacaatgga gtttcaagat ggttgaagtt ttagcacttg atcagaagac
      421 tctcgggtta agatatagat atacagatta aaggaaagga gtacatgatc gtctagagct
      481 gggtagattg ctaattagag gaaagaatga tatggcaagc tatctgtgta ggccttatgt
      541 ttcaagtaat ttcggtgttt agtgttaatg atatgcaaaa tctcaacata tgtctgatgc
      601 ccgaatcagt agaatacgga aaataatcgc tttatctaag caaagatttt catgaaaggg
      661 atgtctagaa gtgtaatggg catcgctttg gatttatcgc tttggagttg gtgaactttc
      721 acatggtggg agattttcat cttctgtgga ccaccccagc aattacagta gcggaggact
      781 atctaatcag ttctgaactc tcatacttaa tgtgcagttt gtcactggtt taccttcttc
      841 tgctatatgg aaagattgaa ggaactgttt gtaagaggag accttggtgt tgatttgctg
      901 gtcgaaaagg ttccaatagt ccagctaacc aatttctatt tctatcagca taaaatcgga
      961 ttaggcatgt tgggtaacaa cataataatt gaaatggcct acgatgtaac tccatgtgtg
     1021 acataagagc tatacctgag agctaaaggg gaatacctga tagttagaca agaaaaattc
     1081 aagattgacc cccatgtacc gggtgaaatt cctcatctct gctgtagttg agctggtgag
     1141 ttgcaaataa ttcatgctgc tttattatag gtagaaaaat cggtgagttg gattaataaa
     1201 tctactacaa gctactcata actcagaatc aattctccat ccttagcata tcgtcttcta
     1261 tacgtgcatg agttgtagct gaaccagtgt gcttgtggct ctttttataa aaaaattcac
     1321 cattctgaga ttctgcgtgc tgacaataac tcaaaccatc gagccaacca ttctaaaaac
     1381 aacaacaaaa aggcgtgaat gatcagctaa caggttcttc agaatcaata tttagggttg
     1441 ggcagttgat aacagatgtg cttgttgaga gacctataaa tcttcactat gggcttggtc
     1501 tctttatagc tttacatact gctatccttt atatattgat atttaaattt caactttgtt
     1561 agtccaggta cataatatct cattatttca tcttatttat acttgattgc tttgcttggg
     1621 acaatttttt tttactgcag ttaacttatt acatattgtg tgtaatacta tttttcaaat
     1681 taagatgcta accttgtgat cttggtgaaa aaacgaagat gctacatgga gaccttgtca
     1741 agattatcgg tcatttaatc atgccacggt tctggataac tatcctattc cggtagtaga
     1801 acatatgcta gataagttac atgggttaac gttcttcctt aaaatcgggc gttatgtatt
     1861 tgttgttgtc aggtgtcata tttcaaattt tttttttttt tttttttttt taataaatgc
     1921 aatctggaag tatgtacaag catgttaaat tgaagaatgt tagcaaattg ttacattttt
     1981 cacatgtttg cctgtgacaa cggagtatgt gcttacttaa cacttgccag ttatgagatt
     2041 ggtcgaagag tgacctttgg aaaatgagca tgtagtttta gctaatcagg tttgattatt
     2101 cgttatatgt ttcttgtgta tacctttata agtttaaacg cgaggtgatg aatacattat
     2161 tggttcaggt gatttcaatg tcatggggtg caaggtgcgg tagagatggt ttcgttgtag
     2221 ttaaattgcc tcaagagtca agactcgtga agcctgttgc ttataatcca gttggagcta
     2281 ttgatggagc gggtgacgaa acccaattag agccattaat ggagtagtag ctgatggcca
     2341 tcaagtatcg tgttagatat cacaacaggc acgtgacata ttatcacatg gaatgggtgc
     2401 attgcaacaa tcgttatcta tgacaaaatg gcagcgtgtt gatttgtgcc tcgggttcat
     2461 taagtaatgt agcaaactac atggattaaa cggcaatggc tatgggttaa cttgaacact
     2521 tcgtgtctcc atctgatgag cgattttact acatctaagt gttgctctct ctctctcgcc
     2581 cacatgcata ttgccattcc cgatggacac caagcggaac tcagagtcac cacgtgatgt
     2641 tcaaaattta gagacatcaa cggggagaac atctagtggc attgctgcta tgaatatctt
     2701 gtgaatggaa cctctttaag tgattataga gttcaagtag tccataatgt ttagctttca
     2761 tgttttgcca accgttcaaa taaagatttg atcaacctgt ttagtcttca agatcttaaa
     2821 ggatggcgac gcctcatgtt tcaagttttt atagatttct cgtccaaagc actgatgtcg
     2881 gcttcaagca acaattccgt tcctgctcat gtttccccgt ctgccgctcg tcgtgcacga
     2941 cagcctcgct tgagagatcc tgttaaatac gacatggcta ctatcaccca tatgaccagg
     3001 gcatatacga atgagactcg cattgatgct cttagcgact gtatgcgtgt cttgccgcat
     3061 acggaggtga tggatgagat tagagctgat atggatacgt tcgttagctt caagcatggg
     3121 attgagttcg agactcggaa gcgtaatcga gaggtggaca ctaagttcga ggctcttgag
     3181 agcgtggttc gtggtctgaa gacggagttg gagcaggtga aaggaaagtt gaggaagtat
     3241 gagactcctg acgagcctca taccggccca gcttatcaca cccgctccaa gaagatgtga
     3301 tgtgattata tcatgagtga ttattttatt tcatggacta tttatccttt tatacattca
     3361 tttttgggtg atgtacggcg ttttgccgag gattttgtta tgggaaattt tcat
//
LOCUS       XM_071886520            2529 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CLP protease regulatory
            subunit CLPX3, mitochondrial-like (LOC139904583), transcript
            variant X1, mRNA.
ACCESSION   XM_071886520
VERSION     XM_071886520.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2529
                     /gene="LOC139904583"
                     /note="CLP protease regulatory subunit CLPX3,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139904583"
     CDS             195..2243
                     /gene="LOC139904583"
                     /codon_start=1
                     /product="CLP protease regulatory subunit CLPX3,
                     mitochondrial-like isoform X1"
                     /protein_id="XP_071742621.1"
                     /db_xref="GeneID:139904583"
                     /translation="MSNLWRFNKFTDVIITSKFYSSYTSKRGFVKLNPRIGRPCIRRS
                     SLIGAQSRYKSEHGGGGGGYDESTGKTSMMTRRIKAEANCPKCCKPMDLVFTDYRNVI
                     PSSESSTGDELDTAQNSSPKQAVTFCPNCKSAYSSRSYKMVPLQGRFIEIGRYKNGNG
                     NGKDKDKKNGNGEDDYGNKLRASFWATLRAYGGDSPENWTNRPPQQPQTPSVNGLAVH
                     TPPGPPFAPGINVVRAGVGGGGGNGDGGGGEKNSGWGGSNLGKNLPTPKEIFQGLDKF
                     VIGQTRAKKVLSVAVYNHYKRIYHASLQKGSGGESGSTKMDDDDDNVELEKSNVLLMG
                     PTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLTVADFNVQAAQ
                     QGMVYIDEVDKITKKVFSAESMNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPR
                     GENIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRENMRSGKLTNATVTSS
                     LLESVESSDLIAYGLIPEFIGRFPILLSLSALTEDQLVQVLMEPKNALGKQYKKLFQM
                     NNVKLHFSEKALRLIAQKAMVKNTGARGLRAILETLLTDAMYEIPDIKTGNDRVEAVV
                     IDEESVGTVDKFGCGGKILRGDGALDDYLSNSKCKERMEAEGQLLEGDEDVSSKAMSM
                     "
     misc_feature    975..2084
                     /gene="LOC139904583"
                     /note="ATP-dependent protease Clp, ATPase subunit ClpX
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpX; COG1219"
                     /db_xref="CDD:440832"
ORIGIN      
        1 tcttatttat tgccctaatt cttacgtaat aaattcatat taatttatgg atcagatact
       61 tacgtaattc tcacacaaca tatgcatgta tcctccatct atactttata aaaataaatc
      121 tcttaatttt caacacaatt tcctatcgaa tttctcgata atttggttat attctttata
      181 taaataaata aataatgtct aatttatgga gatttaataa gttcacagat gtaataatca
      241 catcgaagtt ttattcatcg tacacatcga aacgtggatt tgtgaaatta aaccctagaa
      301 ttggtcgccc gtgtattcgc cggagttcgt taatcggcgc gcaatcgaga tacaaatcgg
      361 agcacggtgg cggcggtggt ggttatgatg agagtactgg taaaacgtcg atgatgacac
      421 gtaggattaa agctgaagct aattgtccta aatgttgtaa accgatggat ctagttttta
      481 ccgattaccg gaatgtcatt ccttcatcgg aatcttctac cggagatgaa ttggatacag
      541 cacagaattc gagtcctaaa caggcggtta ctttttgccc taattgtaaa tctgcttatt
      601 catctaggtc gtataaaatg gttcctttgc agggtaggtt tattgaaatt ggtagatata
      661 aaaacggtaa tggtaatggt aaggataaag ataagaaaaa tggtaatggt gaagatgatt
      721 atggaaataa actcagggct tcattttggg cgacattgcg ggcgtatggc ggtgattcgc
      781 cagaaaattg gactaatcgt cccccacagc aaccacaaac gccgtctgtt aatgggctgg
      841 cggtgcatac tccgcctggt cctccttttg cacccgggat taatgtcgtc cgtgcaggcg
      901 ttggcggtgg tggtggaaat ggagatggtg gtggtggaga gaagaatagt ggctggggcg
      961 gatcgaattt ggggaagaat ttgcctacac ccaaagagat ttttcaaggt cttgataagt
     1021 ttgttattgg tcaaactcgt gccaaaaagg tgctttctgt ggctgtttat aaccattaca
     1081 aaagaatata tcacgcttcc ttgcagaaag ggtcaggagg cgaatcagga agcacaaaaa
     1141 tggatgatga tgatgataat gtagaattag agaaaagtaa tgtactttta atgggcccaa
     1201 ctggctcagg gaagacgtta cttgcaaaga cgcttgctcg ttttgttaat gtcccctttg
     1261 tcattgctga tgcaacgaca ttaacgcagg ccggatatgt tggcgaagac gttgaatcta
     1321 tattacataa gctacttacg gttgcagact tcaatgttca agcagcccaa caagggatgg
     1381 tttatattga tgaagtagat aagataacca aaaaggtatt ttcggctgag agcatgaaca
     1441 tcagtagaga tgtttctggg gagggtgttc agcaagctct acttaagatg ttggaaggaa
     1501 ctatagtaaa tgtgcctgag aagggggcca ggaagcatcc acgaggcgaa aacatccaga
     1561 tagatacaaa agacatcctt ttcatttgtg gtggagcatt tattgatctg gaaaaaacta
     1621 tatctgaaag acgacaggac tcttcaattg gttttggagc acccgttcgt gaaaatatga
     1681 gaagcggtaa actgactaat gctacggtca catcatcttt acttgaatct gttgaaagta
     1741 gtgatcttat agcttatgga ctgattcctg agtttatagg acgttttcca attttactta
     1801 gtttatccgc tctaaccgag gaccaattag ttcaggtcct tatggaacca aagaacgctc
     1861 ttggtaagca atacaagaaa ttgtttcaga tgaacaatgt gaaactacat ttctcagaga
     1921 aggcactaag gttaatagct caaaaggcaa tggttaagaa cactggtgct agaggtttaa
     1981 gagccatact tgaaactctt ctaactgacg ctatgtatga gattcctgat atcaagacgg
     2041 gcaatgatcg agtagaggca gtggtgatcg acgaggagtc agttggcaca gtagataaat
     2101 ttggatgcgg tggaaaaatc ctccgtggtg atggtgcatt agatgattat ctttcaaata
     2161 gcaagtgtaa agaacgtatg gaagccgaag ggcagctgtt ggaaggtgac gaagatgtct
     2221 catcaaaggc catgagtatg taagataact atcgatacag ttacaattaa gcgtaattta
     2281 gtttaggaag tctccgttgt tgattgcgtt gtataaacca tccataaact ggtgtaaatt
     2341 atcttaatat agaacagaat agcatctcat tcggatagag ttgatagata ggcaaaataa
     2401 taagaaaaat ccgatcagtc aatggaggta aaacatagag aaaatgtagc ttccatttat
     2461 aagatgcact ctgtaaaaaa aaaaaagaac atttgaaatt gcagtattga gccaatttat
     2521 tttatattt
//
LOCUS       XM_071886521            2520 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CLP protease regulatory
            subunit CLPX3, mitochondrial-like (LOC139904583), transcript
            variant X2, mRNA.
ACCESSION   XM_071886521
VERSION     XM_071886521.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2520
                     /gene="LOC139904583"
                     /note="CLP protease regulatory subunit CLPX3,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 20 Proteins"
                     /db_xref="GeneID:139904583"
     CDS             195..2234
                     /gene="LOC139904583"
                     /codon_start=1
                     /product="CLP protease regulatory subunit CLPX3,
                     mitochondrial-like isoform X2"
                     /protein_id="XP_071742622.1"
                     /db_xref="GeneID:139904583"
                     /translation="MSNLWRFNKFTDVIITSKFYSSYTSKRGFVKLNPRIGRPCIRRS
                     SLIGAQSRYKSEHGGGGGGYDESTGKTSMMTRRIKAEANCPKCCKPMDLVFTDYRNVI
                     PSSESSTGDELDTAQNSSPKQAVTFCPNCKSAYSSRSYKMVPLQGRFIEIGRYKNGNG
                     NGKDKDKKNGNGEDDYGNKLRASFWATLRAYGGDSPENWTNRPPQQPQTPSVNGLAVH
                     TPPGPPFAPGINVVRAGVGGGGGNGDGGGGEKNSGWGGSNLGKNLPTPKEIFQGLDKF
                     VIGQTRAKKVLSVAVYNHYKRIYHASLQKGSGGESGSTKMDDDDDNVELEKSNVLLMG
                     PTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLTVADFNVQAAQ
                     QGMVYIDEVDKITKKAESMNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGEN
                     IQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRENMRSGKLTNATVTSSLLE
                     SVESSDLIAYGLIPEFIGRFPILLSLSALTEDQLVQVLMEPKNALGKQYKKLFQMNNV
                     KLHFSEKALRLIAQKAMVKNTGARGLRAILETLLTDAMYEIPDIKTGNDRVEAVVIDE
                     ESVGTVDKFGCGGKILRGDGALDDYLSNSKCKERMEAEGQLLEGDEDVSSKAMSM"
     misc_feature    975..2075
                     /gene="LOC139904583"
                     /note="ATP-dependent protease Clp, ATPase subunit ClpX
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpX; COG1219"
                     /db_xref="CDD:440832"
ORIGIN      
        1 tcttatttat tgccctaatt cttacgtaat aaattcatat taatttatgg atcagatact
       61 tacgtaattc tcacacaaca tatgcatgta tcctccatct atactttata aaaataaatc
      121 tcttaatttt caacacaatt tcctatcgaa tttctcgata atttggttat attctttata
      181 taaataaata aataatgtct aatttatgga gatttaataa gttcacagat gtaataatca
      241 catcgaagtt ttattcatcg tacacatcga aacgtggatt tgtgaaatta aaccctagaa
      301 ttggtcgccc gtgtattcgc cggagttcgt taatcggcgc gcaatcgaga tacaaatcgg
      361 agcacggtgg cggcggtggt ggttatgatg agagtactgg taaaacgtcg atgatgacac
      421 gtaggattaa agctgaagct aattgtccta aatgttgtaa accgatggat ctagttttta
      481 ccgattaccg gaatgtcatt ccttcatcgg aatcttctac cggagatgaa ttggatacag
      541 cacagaattc gagtcctaaa caggcggtta ctttttgccc taattgtaaa tctgcttatt
      601 catctaggtc gtataaaatg gttcctttgc agggtaggtt tattgaaatt ggtagatata
      661 aaaacggtaa tggtaatggt aaggataaag ataagaaaaa tggtaatggt gaagatgatt
      721 atggaaataa actcagggct tcattttggg cgacattgcg ggcgtatggc ggtgattcgc
      781 cagaaaattg gactaatcgt cccccacagc aaccacaaac gccgtctgtt aatgggctgg
      841 cggtgcatac tccgcctggt cctccttttg cacccgggat taatgtcgtc cgtgcaggcg
      901 ttggcggtgg tggtggaaat ggagatggtg gtggtggaga gaagaatagt ggctggggcg
      961 gatcgaattt ggggaagaat ttgcctacac ccaaagagat ttttcaaggt cttgataagt
     1021 ttgttattgg tcaaactcgt gccaaaaagg tgctttctgt ggctgtttat aaccattaca
     1081 aaagaatata tcacgcttcc ttgcagaaag ggtcaggagg cgaatcagga agcacaaaaa
     1141 tggatgatga tgatgataat gtagaattag agaaaagtaa tgtactttta atgggcccaa
     1201 ctggctcagg gaagacgtta cttgcaaaga cgcttgctcg ttttgttaat gtcccctttg
     1261 tcattgctga tgcaacgaca ttaacgcagg ccggatatgt tggcgaagac gttgaatcta
     1321 tattacataa gctacttacg gttgcagact tcaatgttca agcagcccaa caagggatgg
     1381 tttatattga tgaagtagat aagataacca aaaaggctga gagcatgaac atcagtagag
     1441 atgtttctgg ggagggtgtt cagcaagctc tacttaagat gttggaagga actatagtaa
     1501 atgtgcctga gaagggggcc aggaagcatc cacgaggcga aaacatccag atagatacaa
     1561 aagacatcct tttcatttgt ggtggagcat ttattgatct ggaaaaaact atatctgaaa
     1621 gacgacagga ctcttcaatt ggttttggag cacccgttcg tgaaaatatg agaagcggta
     1681 aactgactaa tgctacggtc acatcatctt tacttgaatc tgttgaaagt agtgatctta
     1741 tagcttatgg actgattcct gagtttatag gacgttttcc aattttactt agtttatccg
     1801 ctctaaccga ggaccaatta gttcaggtcc ttatggaacc aaagaacgct cttggtaagc
     1861 aatacaagaa attgtttcag atgaacaatg tgaaactaca tttctcagag aaggcactaa
     1921 ggttaatagc tcaaaaggca atggttaaga acactggtgc tagaggttta agagccatac
     1981 ttgaaactct tctaactgac gctatgtatg agattcctga tatcaagacg ggcaatgatc
     2041 gagtagaggc agtggtgatc gacgaggagt cagttggcac agtagataaa tttggatgcg
     2101 gtggaaaaat cctccgtggt gatggtgcat tagatgatta tctttcaaat agcaagtgta
     2161 aagaacgtat ggaagccgaa gggcagctgt tggaaggtga cgaagatgtc tcatcaaagg
     2221 ccatgagtat gtaagataac tatcgataca gttacaatta agcgtaattt agtttaggaa
     2281 gtctccgttg ttgattgcgt tgtataaacc atccataaac tggtgtaaat tatcttaata
     2341 tagaacagaa tagcatctca ttcggataga gttgatagat aggcaaaata ataagaaaaa
     2401 tccgatcagt caatggaggt aaaacataga gaaaatgtag cttccattta taagatgcac
     2461 tctgtaaaaa aaaaaaagaa catttgaaat tgcagtattg agccaattta ttttatattt
//
LOCUS       XM_071886522            1861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides berberine bridge enzyme-like
            D-2 (LOC139904584), mRNA.
ACCESSION   XM_071886522
VERSION     XM_071886522.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1861
                     /gene="LOC139904584"
                     /note="berberine bridge enzyme-like D-2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139904584"
     CDS             1..1719
                     /gene="LOC139904584"
                     /codon_start=1
                     /product="berberine bridge enzyme-like D-2"
                     /protein_id="XP_071742623.1"
                     /db_xref="GeneID:139904584"
                     /translation="MECNLLQKLTIFVFFIMSISIPTFACQYEHKQEPELEHENDQDR
                     VQDEQDPTSLFTSCLTRFGVHNFTTNSNNDNSVYYEFLNFSIQNLRFSGSSMPKPAVI
                     VFPETKEQLAKTVMCARESSLEIRARCGGHSYEGTSSVSTYGRPFVVIDMTKLEKVSV
                     DVNSGTAWVEAGATLGQMYYAIAESSAVHGFSAGSCPTVGVGGHISGGGFGLLSRKYG
                     LAADNVVDAILVTADGELMNREAMGEDVFWAIRGGGGGVWGIVYAFNVILSSVPETVT
                     NFVVSRPGTKGYVTDLVNKWQHIAPKLPEDFYLSSFVGAGLPERKGKPGLSATFKGFY
                     LGAKTKMLSIINQTFPELKVMENDCKETSWIESILFFSGYGDESSVSDLKNRFLQDKL
                     YYKAKSDYVRIPIPRFGLTTALDILEKQPKGYVILDPYGGAMETISSDSIPFPHREGN
                     IFTIQYLVEWKEVDSDKADEYLAWIRGFHGSMTPYVAQDPRAAYINYMDVDIGVMNWI
                     KTRVDSDDAVEMGREWGEKYFYKNYDRLVRAKTQIDPYNVFRHQQSIPPMRLENKSQR
                     ESISSQ"
     misc_feature    295..708
                     /gene="LOC139904584"
                     /note="FAD binding domain; Region: FAD_binding_4;
                     pfam01565"
                     /db_xref="CDD:426326"
     misc_feature    1477..1668
                     /gene="LOC139904584"
                     /note="Berberine and berberine like; Region: BBE;
                     pfam08031"
                     /db_xref="CDD:369658"
ORIGIN      
        1 atggagtgta atctcctgca aaaactaact atttttgtct tctttatcat gtctatttcc
       61 atacccactt ttgcttgtca atacgagcat aagcaagagc ccgagcttga acatgaaaat
      121 gatcaggatc gagtacaaga tgaacaagac cctacgagtt tattcacttc gtgtttaact
      181 cggtttgggg ttcacaattt tacaactaat tcgaataatg ataattcggt ttattatgag
      241 tttcttaatt tttcaattca aaatcttaga ttttcgggtt catcgatgcc taaaccagcg
      301 gttatcgtgt tcccggaaac gaaagaacag ttggcgaaaa cagtgatgtg tgctcgagaa
      361 tcatcgttag aaattcgggc ccggtgtgga ggtcacagct atgaagggac atcatccgtc
      421 tccacgtacg gacgtccgtt tgtggtgatc gatatgacga aattagaaaa agtttctgtg
      481 gacgtgaact cgggaactgc atgggttgaa gcgggcgcaa cacttggtca aatgtactac
      541 gcgatagccg agtcgagtgc ggtccatggt ttctcagcgg ggtcgtgccc gactgtggga
      601 gtaggtggtc atatttcggg tggtgggttt gggttattat cgcgaaaata tggcctagca
      661 gctgataatg tggtagacgc aattttagta accgcagacg gtgagttaat gaacagggag
      721 gccatgggcg aggatgtctt ttgggcgatt agaggtggtg gtggcggggt ttggggaatt
      781 gtgtacgcat tcaatgttat attgtcaagc gtaccggaaa cagtcactaa tttcgtcgtg
      841 tctagaccag gtacgaaggg atatgtgact gatttggtaa ataaatggca acacattgca
      901 cctaaattgc ccgaagactt ttacttatcg tcatttgtag gtgcaggttt gccggaacgc
      961 aaaggcaaac cgggtttatc ggctacgttc aaaggatttt atttgggagc gaaaacaaaa
     1021 atgttatcta tcataaatca aacgtttcct gagctaaaag tcatggaaaa cgactgtaag
     1081 gaaacgagtt ggattgagtc gattcttttc ttctcgggtt atggagatga aagttcggtt
     1141 tctgacttga agaatcgctt cttacaagat aagttgtact acaaggccaa atcggactat
     1201 gttcggatac ctattccaag gttcgggcta actaccgcac ttgatatact cgagaaacaa
     1261 ccaaaaggat atgtgatttt ggacccgtac ggtggcgcaa tggaaactat aagtagcgac
     1321 tcgattccat tccctcatag agaaggtaat atattcacta ttcagtatct agtggaatgg
     1381 aaagaagtag acagcgataa agcggatgag tacttagctt ggatacgagg gtttcacggc
     1441 tcgatgaccc cctatgtggc acaagaccca cgagccgcgt acattaacta catggatgtt
     1501 gatatcggag taatgaactg gattaaaact cgagtcgact cagatgatgc ggttgagatg
     1561 ggtcgagaat ggggggagaa gtacttttat aagaattacg atcgattagt gagagcgaag
     1621 acacaaatcg atccgtacaa tgtttttagg catcaacaga gtatccctcc aatgcgtttg
     1681 gagaacaaga gtcaaaggga aagtatatcc agtcaatagt caaaagtgta atgaatcaga
     1741 ttgttcctta atccttcttt gtatgtaaaa atctgtgaga taatcaacat agagtcaaac
     1801 tatttaagca tcgctattgt acccagacaa aaaacacgca atttaagaaa tataaaataa
     1861 a
//
LOCUS       XM_071886523            3396 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904585), transcript variant X1, mRNA.
ACCESSION   XM_071886523
VERSION     XM_071886523.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3396
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3396
                     /gene="LOC139904585"
                     /note="uncharacterized LOC139904585; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904585"
     CDS             111..2783
                     /gene="LOC139904585"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742624.1"
                     /db_xref="GeneID:139904585"
                     /translation="MPPKTARKSVGPGRRGGRTRGTAAKAAVVKPDPVTTPTESVNPV
                     EEQVEPIEDKKEEAEKVEEKVEEKVVADNGIDRSKREDSDVKISVEECENGERLDFDD
                     NDPEESEPEEYVGDDVDEKESVEDVQEEVHDDYDVEEVEEEEACEEEDGDEHEHEHER
                     EHEHDNEHDNEYDNEQEHDNEQEHDNELEHEDEHAAEEHAEMVDADEQEHHDVFKERR
                     KRKEFEIFVGGLEKDATEEDLRKVFSAVGEVSEVRLMMNSLTKKNKGFAFICFATVEQ
                     AKRACVELKNPVVHGKQCGVTPSQDSDTLFLGNICKTWTKEALIEKLKNYGIDTVEDL
                     TLVEENKTDGTNKGYAFLEFSSRADAMEAFKRLQKRDVTFGVDRPAKVSFADSFVDPG
                     DDIMSQVKTIFVDGLPASWDEARVRKLLSKYGNVEKIELARNMPFARRKDYGFITFGT
                     HDEAVTCAININNEELGEGKNKAKVRARLSRPTQKGKGKHVPRGDFRPGRPATGGVRS
                     SWARSVPRHLPPRGSRRVDGRLPPVDDRRVRRPVALRDRRPATALPPRRPVALPPRRP
                     VTRPPRRPVAPPPRRPVALPPRRPVSPVPRSYERRPPVPSQIKNSMKRAYSQREELPP
                     RSRVDVEYGPPRSRVDVEYGPPRSRVDADYGPPRSRVDVEYGPPRSRVDDEYGPPKSR
                     VDDEYGPPRSTSERSSYPTRGPTYVDLPTGSSHSSSRRAYIEGDDYPTRFERPPSYRE
                     GRARDYESVPGSKRPYAALDDVRPRYAEDEPRQSRARIDYDMGGGSSQYGDEYGDRLG
                     RSNIGYGSNRSPIAAHDSRGLYSSSRQGMSYGGGAGSYIGNDSGGMHSSSYGGDYISR
                     GSDVGGSSYSSSLYSGRSVGGNGYVGSGSSRSYY"
     misc_feature    780..>1622
                     /gene="LOC139904585"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; Region: hnRNP-R-Q; TIGR01648"
                     /db_xref="CDD:273732"
ORIGIN      
        1 tctaggaatt cataaacgca aaacacacac atacaaaaaa gagtcatcaa aaattattaa
       61 tcaatcaaga tcagaacttt ctaatcatcg gagcaattat acacactgcg atgcctccca
      121 aaacagcaag gaagtcagtt ggaccgggga gaagaggcgg cagaaccaga ggaacggcgg
      181 cgaaggcggc ggtggtgaag cctgatccgg taacgacgcc gacagaatct gtgaatccgg
      241 tggaagaaca ggttgaacca attgaggata aaaaagagga agctgagaag gttgaagaaa
      301 aagttgagga gaaagtagtg gctgataatg gaattgatcg atcaaagaga gaagacagtg
      361 atgtgaaaat atccgttgag gaatgtgaaa acggtgaacg attggacttt gacgataatg
      421 atcctgaaga atctgaaccc gaggagtatg ttggagatga tgttgatgag aaggaatcgg
      481 tagaagatgt tcaagaggag gttcatgatg attatgatgt ggaggaagtt gaggaagagg
      541 aagcttgtga ggaagaagat ggtgatgaac atgaacatga acatgaacgt gaacatgaac
      601 atgataatga acatgataat gaatatgata acgaacaaga acatgataac gaacaagaac
      661 atgataacga attagaacat gaagatgaac atgctgctga agagcatgct gaaatggtag
      721 atgcagatga acaggagcat catgatgttt ttaaagagag acgtaaacgg aaggagtttg
      781 aaatctttgt tggtgggtta gaaaaagatg ctaccgagga ggatcttagg aaggtgttta
      841 gtgcagttgg tgaggtatct gaagtcaggc ttatgatgaa ttctctaacg aagaagaata
      901 aaggatttgc atttatttgt tttgcaactg tagaacaggc aaaacgagct tgtgtagagc
      961 tgaaaaaccc tgtggttcat gggaaacaat gtggtgttac gccaagtcaa gacagtgata
     1021 ctttattttt gggtaatata tgcaagacat ggacaaagga agctctaata gagaaattga
     1081 aaaactatgg aattgatact gtcgaagatt tgactttggt tgaagaaaat aaaactgatg
     1141 gaactaataa aggctatgcc tttttggagt tctcttcacg cgcagatgct atggaagctt
     1201 ttaaacgtct gcaaaaacga gatgtaactt ttggtgttga tagacctgcc aaggtttctt
     1261 ttgcagattc tttcgttgac cctggtgatg acatcatgtc tcaggttaag actatttttg
     1321 tagatggttt gcctgcttct tgggatgagg ctcgagttcg gaagcttctc agcaaatatg
     1381 ggaatgtgga gaaaatcgag cttgctcgta acatgccttt tgctagaaga aaagattacg
     1441 ggtttatcac atttggaaca catgatgaag ctgtaacatg tgctattaac attaataatg
     1501 aggaactagg agaaggaaaa aacaaggcta aagttagggc cagattgtcg cgaccaactc
     1561 aaaaaggcaa aggaaaacat gttccacgtg gtgattttcg accgggtcgt cctgcaactg
     1621 gcggagttag aagttcgtgg gcccgttcag tgccacgtca tttaccccca cgtggttcaa
     1681 gaagagttga tggacgactg ccgcctgttg atgatcgtag ggttaggagg cctgttgcct
     1741 taagagacag acgacctgct accgctctgc caccgagaag gcctgtggct ctgccgccaa
     1801 gaaggcctgt gactcggccg ccaagaaggc cagtggctcc gccgccgaga aggcctgtgg
     1861 ctctgccgcc aagaaggcca gttagtcctg taccaaggtc atatgaaagg aggccacctg
     1921 ttccttctca aatcaagaac agcatgaagc gggcttacag tcaacgtgaa gagcttccac
     1981 caaggagcag agtcgatgtt gaatatggcc caccaaggag cagagtcgat gttgagtatg
     2041 gcccaccaag aagcagagtt gatgctgatt atggcccacc aaggagcaga gtcgatgttg
     2101 agtatggccc accaaggagc agagtcgatg atgagtatgg cccaccgaag agcagagtcg
     2161 acgatgagta tggcccacct aggtctacct cagagagaag ctcttaccct actcgtggac
     2221 ccacctatgt tgatcttcct acaggatcct ctcactcttc atcaaggaga gcctacatag
     2281 aaggtgacga ttatcctact agatttgaga gaccgccaag ttatcgtgaa ggacgcgcac
     2341 gtgattatga gtctgttccc ggatcaaaac gtccatatgc tgcactggat gatgttcgac
     2401 cccgctatgc tgaggatgaa ccgcgtcagt cgcgtgcccg catagattat gatatgggag
     2461 gtggatcttc acagtacgga gatgaatatg gagatagact tggaagatca aacataggat
     2521 acggtagtaa taggagtcca attgctgctc acgattctcg tggtctttat agtagcagtc
     2581 gacaaggcat gtcttatggt ggtggagcag gctcttacat tggtaatgat tctggtggta
     2641 tgcactcatc aagctatggt ggagattaca tttctcgtgg aagtgatgtt ggtggaagct
     2701 cttactcatc atcactgtat tctggtcgta gcgtaggtgg gaatggttac gtgggtagtg
     2761 gaagctcacg atcctactat tgagatgatt tattgaagag gctgctgtag actgagataa
     2821 ttaaaggtca ttaattatga tgcctacagc ttctcaggaa ggagcgtgta atcttgaaaa
     2881 gcctctcgtt tttgtgatgg acaatcaaaa tgtggtgttg attctcgtta ggtgtaggac
     2941 atgttagttt gatggtttaa gttgtgtgta tgaacgagtt cagtttctga tattatgctg
     3001 taagagaaac ctgatccggt gattatgaat gcaagttccg ttctaaatct atgaacacta
     3061 atgatatgtt gcacaaccat tataatggat gaaaaaccaa ttaaggatag ttgattatat
     3121 ggaggatacg aacacgaaca cgggagtttg actttcagcc agtgtgtttt ggaaaaaaag
     3181 cttgttgtca actaggtgat attttaatgt catttaactc catttagaga aggtttaaga
     3241 aattgtttat ttaactaagt aatatggatg cacttgcttc acaagctttt aattctaaga
     3301 tctttaagca atggattaag ttggcatata aacaaacctg taattctggg tttttttttt
     3361 gtatattgtt aatgattcat attaagccaa tgtcta
//
LOCUS       XM_071886524            3499 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904585), transcript variant X2, mRNA.
ACCESSION   XM_071886524
VERSION     XM_071886524.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3499
                     /gene="LOC139904585"
                     /note="uncharacterized LOC139904585; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904585"
     CDS             111..2780
                     /gene="LOC139904585"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742625.1"
                     /db_xref="GeneID:139904585"
                     /translation="MPPKTARKSVGPGRRGGRTRGTAAKAAVVKPDPVTTPTESVNPV
                     EEQVEPIEDKKEEAEKVEEKVEEKVVADNGIDRSKREDSDVKISVEECENGERLDFDD
                     NDPEESEPEEYVGDDVDEKESVEDVQEEVHDDYDVEEVEEEEACEEEDGDEHEHEHER
                     EHEHDNEHDNEYDNEQEHDNEQEHDNELEHEDEHAAEEHAEMVDADEQEHHDVFKERR
                     KRKEFEIFVGGLEKDATEEDLRKVFSAVGEVSEVRLMMNSLTKKNKGFAFICFATVEQ
                     AKRACVELKNPVVHGKQCGVTPSQDSDTLFLGNICKTWTKEALIEKLKNYGIDTVEDL
                     TLVEENKTDGTNKGYAFLEFSSRADAMEAFKRLQKRDVTFGVDRPAKVSFADSFVDPG
                     DDIMSQVKTIFVDGLPASWDEARVRKLLSKYGNVEKIELARNMPFARRKDYGFITFGT
                     HDEAVTCAININNEELGEGKNKAKVRARLSRPTQKGKGKHVPRGDFRPGRPATGGVRS
                     SWARSVPRHLPPRGSRRVDGRLPPVDDRRVRRPVALRDRRPATALPPRRPVALPPRRP
                     VTRPPRRPVAPPPRRPVALPPRRPVSPVPRSYERRPPVPSQIKNSMKRAYSQREELPP
                     RSRVDVEYGPPRSRVDVEYGPPRSRVDADYGPPRSRVDVEYGPPRSRVDDEYGPPKSR
                     VDDEYGPPRSTSERSSYPTRGPTYVDLPTGSSHSSSRRAYIEGDDYPTRFERPPSYRE
                     GRARDYESVPGSKRPYAALDDVRPRYAEDEPRQSRARIDYDMGGGSSQYGDEYGDRLG
                     RSNIGYGSNRSPIAAHDSRGLYSSSRQGMSYGGGGSYIGNDSGGMHSSSYGGDYISRG
                     SDVGGSSYSSSLYSGRSVGGNGYVGSGSSRSYY"
     misc_feature    780..>1622
                     /gene="LOC139904585"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; Region: hnRNP-R-Q; TIGR01648"
                     /db_xref="CDD:273732"
ORIGIN      
        1 tctaggaatt cataaacgca aaacacacac atacaaaaaa gagtcatcaa aaattattaa
       61 tcaatcaaga tcagaacttt ctaatcatcg gagcaattat acacactgcg atgcctccca
      121 aaacagcaag gaagtcagtt ggaccgggga gaagaggcgg cagaaccaga ggaacggcgg
      181 cgaaggcggc ggtggtgaag cctgatccgg taacgacgcc gacagaatct gtgaatccgg
      241 tggaagaaca ggttgaacca attgaggata aaaaagagga agctgagaag gttgaagaaa
      301 aagttgagga gaaagtagtg gctgataatg gaattgatcg atcaaagaga gaagacagtg
      361 atgtgaaaat atccgttgag gaatgtgaaa acggtgaacg attggacttt gacgataatg
      421 atcctgaaga atctgaaccc gaggagtatg ttggagatga tgttgatgag aaggaatcgg
      481 tagaagatgt tcaagaggag gttcatgatg attatgatgt ggaggaagtt gaggaagagg
      541 aagcttgtga ggaagaagat ggtgatgaac atgaacatga acatgaacgt gaacatgaac
      601 atgataatga acatgataat gaatatgata acgaacaaga acatgataac gaacaagaac
      661 atgataacga attagaacat gaagatgaac atgctgctga agagcatgct gaaatggtag
      721 atgcagatga acaggagcat catgatgttt ttaaagagag acgtaaacgg aaggagtttg
      781 aaatctttgt tggtgggtta gaaaaagatg ctaccgagga ggatcttagg aaggtgttta
      841 gtgcagttgg tgaggtatct gaagtcaggc ttatgatgaa ttctctaacg aagaagaata
      901 aaggatttgc atttatttgt tttgcaactg tagaacaggc aaaacgagct tgtgtagagc
      961 tgaaaaaccc tgtggttcat gggaaacaat gtggtgttac gccaagtcaa gacagtgata
     1021 ctttattttt gggtaatata tgcaagacat ggacaaagga agctctaata gagaaattga
     1081 aaaactatgg aattgatact gtcgaagatt tgactttggt tgaagaaaat aaaactgatg
     1141 gaactaataa aggctatgcc tttttggagt tctcttcacg cgcagatgct atggaagctt
     1201 ttaaacgtct gcaaaaacga gatgtaactt ttggtgttga tagacctgcc aaggtttctt
     1261 ttgcagattc tttcgttgac cctggtgatg acatcatgtc tcaggttaag actatttttg
     1321 tagatggttt gcctgcttct tgggatgagg ctcgagttcg gaagcttctc agcaaatatg
     1381 ggaatgtgga gaaaatcgag cttgctcgta acatgccttt tgctagaaga aaagattacg
     1441 ggtttatcac atttggaaca catgatgaag ctgtaacatg tgctattaac attaataatg
     1501 aggaactagg agaaggaaaa aacaaggcta aagttagggc cagattgtcg cgaccaactc
     1561 aaaaaggcaa aggaaaacat gttccacgtg gtgattttcg accgggtcgt cctgcaactg
     1621 gcggagttag aagttcgtgg gcccgttcag tgccacgtca tttaccccca cgtggttcaa
     1681 gaagagttga tggacgactg ccgcctgttg atgatcgtag ggttaggagg cctgttgcct
     1741 taagagacag acgacctgct accgctctgc caccgagaag gcctgtggct ctgccgccaa
     1801 gaaggcctgt gactcggccg ccaagaaggc cagtggctcc gccgccgaga aggcctgtgg
     1861 ctctgccgcc aagaaggcca gttagtcctg taccaaggtc atatgaaagg aggccacctg
     1921 ttccttctca aatcaagaac agcatgaagc gggcttacag tcaacgtgaa gagcttccac
     1981 caaggagcag agtcgatgtt gaatatggcc caccaaggag cagagtcgat gttgagtatg
     2041 gcccaccaag aagcagagtt gatgctgatt atggcccacc aaggagcaga gtcgatgttg
     2101 agtatggccc accaaggagc agagtcgatg atgagtatgg cccaccgaag agcagagtcg
     2161 acgatgagta tggcccacct aggtctacct cagagagaag ctcttaccct actcgtggac
     2221 ccacctatgt tgatcttcct acaggatcct ctcactcttc atcaaggaga gcctacatag
     2281 aaggtgacga ttatcctact agatttgaga gaccgccaag ttatcgtgaa ggacgcgcac
     2341 gtgattatga gtctgttccc ggatcaaaac gtccatatgc tgcactggat gatgttcgac
     2401 cccgctatgc tgaggatgaa ccgcgtcagt cgcgtgcccg catagattat gatatgggag
     2461 gtggatcttc acagtacgga gatgaatatg gagatagact tggaagatca aacataggat
     2521 acggtagtaa taggagtcca attgctgctc acgattctcg tggtctttat agtagcagtc
     2581 gacaaggcat gtcttatggt ggtggaggct cttacattgg taatgattct ggtggtatgc
     2641 actcatcaag ctatggtgga gattacattt ctcgtggaag tgatgttggt ggaagctctt
     2701 actcatcatc actgtattct ggtcgtagcg taggtgggaa tggttacgtg ggtagtggaa
     2761 gctcacgatc ctactattga ggttcacact aatttctcat ataatgcctt tttcttgggg
     2821 cccacgaatt catggtgtag gattgatgaa aatggagcat gttactagtg acttttatct
     2881 gtggtacaga tgatttattg aagaggctgc tgtagactga gataattaaa ggtcattaat
     2941 tatgatgcct acagcttctc aggaaggagc gtgtaatctt gaaaagcctc tcgtttttgt
     3001 gatggacaat caaaatgtgg tgttgattct cgttaggtgt aggacatgtt agtttgatgg
     3061 tttaagttgt gtgtatgaac gagttcagtt tctgatatta tgctgtaaga gaaacctgat
     3121 ccggtgatta tgaatgcaag ttccgttcta aatctatgaa cactaatgat atgttgcaca
     3181 accattataa tggatgaaaa accaattaag gatagttgat tatatggagg atacgaacac
     3241 gaacacggga gtttgacttt cagccagtgt gttttggaaa aaaagcttgt tgtcaactag
     3301 gtgatatttt aatgtcattt aactccattt agagaaggtt taagaaattg tttatttaac
     3361 taagtaatat ggatgcactt gcttcacaag cttttaattc taagatcttt aagcaatgga
     3421 ttaagttggc atataaacaa acctgtaatt ctgggttttt tttttgtata ttgttaatga
     3481 ttcatattaa gccaatgtc
//
LOCUS       XM_071886525             581 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mannose/glucose-specific
            lectin-like (LOC139904586), mRNA.
ACCESSION   XM_071886525
VERSION     XM_071886525.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..581
                     /gene="LOC139904586"
                     /note="mannose/glucose-specific lectin-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904586"
     CDS             18..458
                     /gene="LOC139904586"
                     /codon_start=1
                     /product="mannose/glucose-specific lectin-like"
                     /protein_id="XP_071742626.1"
                     /db_xref="GeneID:139904586"
                     /translation="MKKIVLVGPWGSSEEGENWSFKGEGKISKIIITHGECIDSIGFV
                     SHDEDGNALHSSRFGGFGGDYTEVNLDVDVEELKCISGTIGWFDSRVVVTSLSFATDV
                     NKFGPFGTENGTHFSLPISKATFAGFYGRASDYVHAIGVYLKPT"
     misc_feature    63..449
                     /gene="LOC139904586"
                     /note="Jacalin-like plant lectin domain; Region: Jacalin;
                     cd09612"
                     /db_xref="CDD:187708"
     misc_feature    order(63..65,291..293,414..422,426..428)
                     /gene="LOC139904586"
                     /note="sugar binding site [chemical binding]; other site"
                     /db_xref="CDD:187708"
ORIGIN      
        1 cagtactacc tctcaaaatg aaaaagatag tgctagtggg accatgggga agctctgaag
       61 aaggagaaaa ttggtctttc aaaggtgaag gaaagatctc gaagatcatc atcactcatg
      121 gagaatgcat cgattcgatc ggttttgtta gccatgatga ggatggcaac gcccttcatt
      181 cctcaaggtt tggtggtttc ggtggtgact atactgaggt gaatcttgat gtggatgtgg
      241 aggagttgaa gtgcataagt gggacaattg gatggtttga ctcgagggta gttgtgacgt
      301 cactctcatt tgcgactgac gtgaataagt ttggaccatt tggtactgag aacgggactc
      361 atttctcgtt accgatctcc aaagctacct ttgcagggtt ctatggtcgt gctagcgact
      421 atgttcatgc tattggtgtc tatctcaagc ccacttagat ttattaattt gcaatatttt
      481 agacgtggga gaattgtgtt agattgatga actaaataag caccgggtat gatgtaggtg
      541 cacttttgga tgtaagccaa tgttggtact ttttatattt a
//
LOCUS       XM_071886526             460 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904587), mRNA.
ACCESSION   XM_071886526
VERSION     XM_071886526.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..460
                     /gene="LOC139904587"
                     /note="uncharacterized LOC139904587; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904587"
     CDS             34..381
                     /gene="LOC139904587"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742627.1"
                     /db_xref="GeneID:139904587"
                     /translation="MNYNMQGWEKSLAEVHSMLKTAEQNIPSKVSNPGILMIRDGKVK
                     KNKPKTWGKGKGKSIAKKKIPPPPKKENPAKDADCFHCGKVGHWRRNCPSYLSELRKG
                     KAGQTSKSGNEKK"
     misc_feature    268..315
                     /gene="LOC139904587"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
ORIGIN      
        1 aattcactac caaaatcgta tgaccaattt gtgatgaatt acaatatgca aggttgggag
       61 aaatctctgg cagaggtgca ttcgatgctt aaaactgctg aacagaatat tccatctaag
      121 gtttccaatc caggtatcct aatgattagg gatggtaagg tgaagaagaa taagccgaaa
      181 acttggggaa aaggaaaagg caagtcaatt gctaagaaga aaattccacc accccccaag
      241 aaagaaaacc cagctaaaga cgccgactgt ttccactgtg gaaaggttgg ccactggagg
      301 aggaactgtc cttcatacct atctgagttg agaaaaggca aagctggtca gaccagcaag
      361 tcagggaatg agaagaagta agagactgaa gaaagacaca ctagacttaa gagtgggcaa
      421 tggggctcga gctgctgttg aagctattgg aacctatgag
//
LOCUS       XR_011778895             329 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904588), ncRNA.
ACCESSION   XR_011778895
VERSION     XR_011778895.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..329
                     /gene="LOC139904588"
                     /note="uncharacterized LOC139904588; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904588"
     ncRNA           1..329
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904588"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904588"
ORIGIN      
        1 ggcttctaca tttgttacca gagctgagta ggtgaacata tgttctgaag atggctggtt
       61 ttcataagga ttgtgttcca tatgggaaga aagcttgcat caaagagtgt gatcagtgcg
      121 atagggtcaa agatgtgacg aaatgaatga caatccatgt taaggactgg tctggtgcaa
      181 catccttttg ttctcttcgg aaacaatctg gccacaaatc cataatccta aagcatagtt
      241 gcacttggtt acatgcaaag atggatatgg ttgctgatcc gaccattgta cctgatgagt
      301 ttgtcttcct tctaaataag gagtttgtt
//
LOCUS       XM_071886527             999 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger CCCH
            domain-containing protein 15-like (LOC139904589), mRNA.
ACCESSION   XM_071886527
VERSION     XM_071886527.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..999
                     /gene="LOC139904589"
                     /note="zinc finger CCCH domain-containing protein 15-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139904589"
     CDS             1..999
                     /gene="LOC139904589"
                     /codon_start=1
                     /product="zinc finger CCCH domain-containing protein
                     15-like"
                     /protein_id="XP_071742628.1"
                     /db_xref="GeneID:139904589"
                     /translation="MQSYSDFPYSGNDNGNIWSTFLSQPDGATCDDFDAQLYTSIFPR
                     TLPPRHFSVPPNATTVPLSLPPIVAEYACNYSQDFAPFQDLIERRNWCLTNLSLSAKE
                     AEALRQDNVNLQMANSELNKQLSRLQQQHHAAASSSHGNVNVSPNLIGDSVIDRFGRM
                     RIGEKGMNVNKKQGARGVENVDPIKKTDVERVKLPKSISVRSNGYLKPVQVAGGSTVR
                     ARVEDRVKTASKMQRVYVRGKKEEQPLELQLYNQGMTKTELCNKWQQTGACPYGDHCQ
                     FAHGIQELRPVIRHPRYKTEVCRMVLAGDPCPYGHRCHFRHALTEEEKLMSCSINN"
     misc_feature    <766..951
                     /gene="LOC139904589"
                     /note="CCCH-type Zn-finger protein [General function
                     prediction only]; Region: CTH1; COG5063"
                     /db_xref="CDD:227395"
ORIGIN      
        1 atgcagagtt attctgattt tccatatagc ggcaacgata acggtaacat ttggtcaact
       61 tttctcagcc aaccagatgg tgccacgtgt gatgattttg acgcacaact ttacacatca
      121 atctttccta ggactctacc tcctcgtcac ttctccgtac caccaaatgc aacaaccgta
      181 ccattatcgt taccaccgat tgtagccgaa tatgcctgta actattcaca agattttgcg
      241 ccatttcaag acctaatcga gcgacgcaac tggtgcctaa ctaacctcag tttatctgca
      301 aaagaagctg aagcgctgcg tcaagataat gtaaatctac aaatggcaaa ttccgaatta
      361 aacaagcagt tgtctcgctt gcaacagcaa catcatgcag cagcttcaag ttctcatggt
      421 aatgtgaatg tgtctccaaa tctgattgga gattctgtta ttgatcgttt tgggaggatg
      481 agaatcggag agaaaggaat gaatgtaaat aagaaacaag gggcacgtgg agtggagaat
      541 gtggatccga taaagaaaac tgatgtggag cgtgttaagt tgcctaaaag tatttctgtt
      601 cgatctaatg gatacttgaa acctgttcaa gttgctggtg gaagtactgt acgggctcgt
      661 gttgaggatc gggttaaaac agcttctaaa atgcaaaggg tttatgtacg tggaaagaaa
      721 gaggagcaac cactggaact acagctatac aatcagggta tgaccaaaac tgaactctgc
      781 aacaaatggc agcaaactgg tgcctgccca tatggagatc actgtcaatt tgctcatggc
      841 attcaagaac tccgtccagt tattcgtcat ccacgctaca aaacagaagt ctgtagaatg
      901 gtccttgctg gcgacccgtg cccatatggc catcgctgtc attttcgtca tgctctaaca
      961 gaagaagaga aactcatgag ttgcagcatc aataactga
//
LOCUS       XR_011778896             395 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904590), ncRNA.
ACCESSION   XR_011778896
VERSION     XR_011778896.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..395
                     /gene="LOC139904590"
                     /note="uncharacterized LOC139904590; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904590"
     ncRNA           1..395
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904590"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904590"
ORIGIN      
        1 taactgtttc tgggataagt ttgtctttgt ttttttatct atatattgtt acctaaatgc
       61 ctcctaaaaa gtggtaaatg agaatgcttg cggttgatgg atgtaatttt ccagcttttg
      121 ggtccaattt tgtgtcttct agacaaatag caaataaagc aatcaatttt gtatcgcaat
      181 actggtaatc cttggtcgta ttcacacatg gcaattggaa tagatacatc tatgaccaat
      241 gttggttgta gttctaatga attctgcgag ttatcttcgg acagtaacgt gagaagtact
      301 aatgttacta tcgttgaaga tcagtctgtg cccaacgatg ataatataac aactgcatct
      361 tcggacgtac gaactacgaa atgctgctgc tggta
//
LOCUS       XR_011778897            1654 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904591), transcript variant X1, ncRNA.
ACCESSION   XR_011778897
VERSION     XR_011778897.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1654
                     /gene="LOC139904591"
                     /note="uncharacterized LOC139904591; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904591"
     ncRNA           1..1654
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904591"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904591"
ORIGIN      
        1 tgccatacct cagacatctc taccttactt tcatgaccgg ccatcttctt taaccctacc
       61 ccattctctt cttcagtttt cttttggctc caaaacaatc atcgttcttc atcttcatct
      121 gctttcttcc ttcttttgat ttctttttac cattttttat ctgcaagtac caaatatggt
      181 agttcgtctc gcaaaggtaa caatttacaa tttttaaaag ttttatcaat ttcagacacg
      241 catctaattt attgtttgtt gattaatcgt ttgtgtttag agattacgtg tttactgata
      301 ttttatgtgt atagatatag atattttttt gaatgtattt aaattgttca ttaggttatt
      361 ttgggggtga attagggttt tctttacctg cttgctgctg aatatagtaa aaagagagtc
      421 cagatgggga tatcattgat ttgtacacat ctctcaccag ccagcttttg atcacccatt
      481 tctcaaagac cataaaatta agatacaata ccaataagga gaacaaaaga agatgatgtt
      541 ttgagagcaa gtgctgttaa aacacatgga aagaagaagc attgaagcac tccagtgcct
      601 agaaacatcc ctaaatctgc tgatcctgat gttgataatg aaagtggtca tcagtcgcgc
      661 gatgtggatt gaccctggag atgatggtgg cagttctgct ggtacgagag actatgacag
      721 tggctgtggt tgagacccaa tcccgtaagc ttcgattcca atctgttaaa cttgcataat
      781 gagtgggacc aaaacagtac ctgacctttt tgtaggggtg tgatatattt tgatggtgca
      841 gcgtgaaaac tgttctgatt cataagaagt agccactttt gttggtaatt tgcagccatc
      901 aaccactact tttagcagcc atctgctgct gttttgtagc ccacaaaaag cctcaaaaaa
      961 ctgttataac agcctgctgc tgctactgtt tgtgttggca ggtcgtagat ttgggagtct
     1021 tgaagaaggt gcttgtggtt caaatgatgg ttaaaagatt gcaaattagg aactgatatt
     1081 ttgatggtgc agcgtgaaaa ctgttctgat tcataagaag tcgccacttt tgttggtcaa
     1141 cactgtagat tcgggagtct tgaagaaggt gcttgtggtt caaatgatgg ttaaaagatt
     1201 gcaaattagg aactgtttga cccggccgat aaaaagtagt tcagaccatc atacgttttg
     1261 ttcgtcgtct atctgtttta aagttgaagg tttccacatt ctatctacta tgtacctgct
     1321 gctgctaacg gttttgcagc tgctcctggt ggcagtctcg ctattgttgt cgaagctagc
     1381 gaatttgatt gtgatatttt tgtgataatt ttgtaaccaa ccatgacatg gtgtttcctt
     1441 atgtgatgat tttgtacgca acgatcatgt ttctttgatt tgagttgcct tggaaaattt
     1501 cgagtttgta aagctactat cctaatacaa tagcatgtgt ttatagtgta gatggtatgt
     1561 atgatcatgt agcaattaat aataatttaa atgtcatgaa attagtttca ttgttttatt
     1621 gtttaagcag ataccatcat aggtattcat tcta
//
LOCUS       XR_011778898            1557 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904591), transcript variant X2, ncRNA.
ACCESSION   XR_011778898
VERSION     XR_011778898.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1557
                     /gene="LOC139904591"
                     /note="uncharacterized LOC139904591; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904591"
     ncRNA           1..1557
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904591"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904591"
ORIGIN      
        1 tgccatacct cagacatctc taccttactt tcatgaccgg ccatcttctt taaccctacc
       61 ccattctctt cttcagtttt cttttggctc caaaacaatc atcgttcttc atcttcatct
      121 gctttcttcc ttcttttgat ttctttttac cattttttat ctgcaagtac caaatatggt
      181 agttcgtctc gcaaaggtaa caatttacaa tttttaaaag ttttatcaat ttcagacacg
      241 catctaattt attgtttgtt gattaatcgt ttgtgtttag agattacgtg tttactgata
      301 ttttatgtgt atagatatag atattttttt gaatgtattt aaattgttca ttaggttatt
      361 ttgggggtga attagggttt tctttacctg cttgctgctg aatatagtaa aaagagagtc
      421 cagatgggga tatcattgat ttgtacacat ctctcaccag ccagcttttg atcacccatt
      481 tctcaaagac cataaaatta agatacaata ccaataagga gaacaaaaga agatgatgtt
      541 ttgagagcaa gtgctgttaa aacacatgga aagaagaagc attgaagcac tccagtgcct
      601 agaaacatcc ctaaatctgc tgatcctgat gttgataatg aaagtggtca tcagtcgcgc
      661 gatgtggatt gaccctggag atgatggtgg cagttctgct ggtacgagag actatgacag
      721 tggctgtggt tgagacccaa tccccgtgaa aactgttctg attcataaga agtagccact
      781 tttgttggta atttgcagcc atcaaccact acttttagca gccatctgct gctgttttgt
      841 agcccacaaa aagcctcaaa aaactgttat aacagcctgc tgctgctact gtttgtgttg
      901 gcaggtcgta gatttgggag tcttgaagaa ggtgcttgtg gttcaaatga tggttaaaag
      961 attgcaaatt aggaactgat attttgatgg tgcagcgtga aaactgttct gattcataag
     1021 aagtcgccac ttttgttggt caacactgta gattcgggag tcttgaagaa ggtgcttgtg
     1081 gttcaaatga tggttaaaag attgcaaatt aggaactgtt tgacccggcc gataaaaagt
     1141 agttcagacc atcatacgtt ttgttcgtcg tctatctgtt ttaaagttga aggtttccac
     1201 attctatcta ctatgtacct gctgctgcta acggttttgc agctgctcct ggtggcagtc
     1261 tcgctattgt tgtcgaagct agcgaatttg attgtgatat ttttgtgata attttgtaac
     1321 caaccatgac atggtgtttc cttatgtgat gattttgtac gcaacgatca tgtttctttg
     1381 atttgagttg ccttggaaaa tttcgagttt gtaaagctac tatcctaata caatagcatg
     1441 tgtttatagt gtagatggta tgtatgatca tgtagcaatt aataataatt taaatgtcat
     1501 gaaattagtt tcattgtttt attgtttaag cagataccat cataggtatt cattcta
//
LOCUS       XR_011778899            1583 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904591), transcript variant X3, ncRNA.
ACCESSION   XR_011778899
VERSION     XR_011778899.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1583
                     /gene="LOC139904591"
                     /note="uncharacterized LOC139904591; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904591"
     ncRNA           1..1583
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904591"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904591"
ORIGIN      
        1 tgccatacct cagacatctc taccttactt tcatgaccgg ccatcttctt taaccctacc
       61 ccattctctt cttcagtttt cttttggctc caaaacaatc atcgttcttc atcttcatct
      121 gctttcttcc ttcttttgat ttctttttac cattttttat ctgcaagtac caaatatggt
      181 agttcgtctc gcaaaggtaa caatttacaa tttttaaaag ttttatcaat ttcagacacg
      241 catctaattt attgtttgtt gattaatcgt ttgtgtttag agattacgtg tttactgata
      301 ttttatgtgt atagatatag atattttttt gaatgtattt aaattgttca ttaggttatt
      361 ttgggggtga attagggttt tctttacctg cttgctgctg aatatagtaa aaagagagtc
      421 cagatgggga tatcattgat ttgtacacat ctctcaccag ccagcttttg atcacccatt
      481 tctcaaagac cataaaatta agatacaata ccaataagga gaacaaaaga agatgatgtt
      541 ttgagagcaa gtgctgttaa aacacatgga aagaagaagc attgaagcac tccagtgcct
      601 agaaacatcc ctaaatctgc tgatcctgat gttgataatg aaagtggtca tcagtcgcgc
      661 gatgtggatt gaccctggag atgatggtgg cagttctgct ggtacgagag actatgacag
      721 tggctgtggt tgagacccaa tcccgggtgt gatatatttt gatggtgcag cgtgaaaact
      781 gttctgattc ataagaagta gccacttttg ttggtaattt gcagccatca accactactt
      841 ttagcagcca tctgctgctg ttttgtagcc cacaaaaagc ctcaaaaaac tgttataaca
      901 gcctgctgct gctactgttt gtgttggcag gtcgtagatt tgggagtctt gaagaaggtg
      961 cttgtggttc aaatgatggt taaaagattg caaattagga actgatattt tgatggtgca
     1021 gcgtgaaaac tgttctgatt cataagaagt cgccactttt gttggtcaac actgtagatt
     1081 cgggagtctt gaagaaggtg cttgtggttc aaatgatggt taaaagattg caaattagga
     1141 actgtttgac ccggccgata aaaagtagtt cagaccatca tacgttttgt tcgtcgtcta
     1201 tctgttttaa agttgaaggt ttccacattc tatctactat gtacctgctg ctgctaacgg
     1261 ttttgcagct gctcctggtg gcagtctcgc tattgttgtc gaagctagcg aatttgattg
     1321 tgatattttt gtgataattt tgtaaccaac catgacatgg tgtttcctta tgtgatgatt
     1381 ttgtacgcaa cgatcatgtt tctttgattt gagttgcctt ggaaaatttc gagtttgtaa
     1441 agctactatc ctaatacaat agcatgtgtt tatagtgtag atggtatgta tgatcatgta
     1501 gcaattaata ataatttaaa tgtcatgaaa ttagtttcat tgttttattg tttaagcaga
     1561 taccatcata ggtattcatt cta
//
LOCUS       XR_011778900            1475 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904591), transcript variant X4, ncRNA.
ACCESSION   XR_011778900
VERSION     XR_011778900.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1475
                     /gene="LOC139904591"
                     /note="uncharacterized LOC139904591; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904591"
     ncRNA           1..1475
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904591"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904591"
ORIGIN      
        1 tgccatacct cagacatctc taccttactt tcatgaccgg ccatcttctt taaccctacc
       61 ccattctctt cttcagtttt cttttggctc caaaacaatc atcgttcttc atcttcatct
      121 gctttcttcc ttcttttgat ttctttttac cattttttat ctgcaagtac caaatatggt
      181 agttcgtctc gcaaagggtt ttctttacct gcttgctgct gaatatagta aaaagagagt
      241 ccagatgggg atatcattga tttgtacaca tctctcacca gccagctttt gatcacccat
      301 ttctcaaaga ccataaaatt aagatacaat accaataagg agaacaaaag aagatgatgt
      361 tttgagagca agtgctgtta aaacacatgg aaagaagaag cattgaagca ctccagtgcc
      421 tagaaacatc cctaaatctg ctgatcctga tgttgataat gaaagtggtc atcagtcgcg
      481 cgatgtggat tgaccctgga gatgatggtg gcagttctgc tggtacgaga gactatgaca
      541 gtggctgtgg ttgagaccca atcccgtaag cttcgattcc aatctgttaa acttgcataa
      601 tgagtgggac caaaacagta cctgaccttt ttgtaggggt gtgatatatt ttgatggtgc
      661 agcgtgaaaa ctgttctgat tcataagaag tagccacttt tgttggtaat ttgcagccat
      721 caaccactac ttttagcagc catctgctgc tgttttgtag cccacaaaaa gcctcaaaaa
      781 actgttataa cagcctgctg ctgctactgt ttgtgttggc aggtcgtaga tttgggagtc
      841 ttgaagaagg tgcttgtggt tcaaatgatg gttaaaagat tgcaaattag gaactgatat
      901 tttgatggtg cagcgtgaaa actgttctga ttcataagaa gtcgccactt ttgttggtca
      961 acactgtaga ttcgggagtc ttgaagaagg tgcttgtggt tcaaatgatg gttaaaagat
     1021 tgcaaattag gaactgtttg acccggccga taaaaagtag ttcagaccat catacgtttt
     1081 gttcgtcgtc tatctgtttt aaagttgaag gtttccacat tctatctact atgtacctgc
     1141 tgctgctaac ggttttgcag ctgctcctgg tggcagtctc gctattgttg tcgaagctag
     1201 cgaatttgat tgtgatattt ttgtgataat tttgtaacca accatgacat ggtgtttcct
     1261 tatgtgatga ttttgtacgc aacgatcatg tttctttgat ttgagttgcc ttggaaaatt
     1321 tcgagtttgt aaagctacta tcctaataca atagcatgtg tttatagtgt agatggtatg
     1381 tatgatcatg tagcaattaa taataattta aatgtcatga aattagtttc attgttttat
     1441 tgtttaagca gataccatca taggtattca ttcta
//
LOCUS       XR_011778901             296 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904592), ncRNA.
ACCESSION   XR_011778901
VERSION     XR_011778901.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..296
                     /gene="LOC139904592"
                     /note="uncharacterized LOC139904592; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904592"
     ncRNA           1..296
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904592"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904592"
ORIGIN      
        1 tatgttcgta tggcaacatg atctttacga attcatatac cagtaaaccc atacatcatc
       61 atcaacatca tcatcatcat catcatcatc atcatcatca tcaactgagt tctgcttgtt
      121 atcgtattac tcaaccgttt accatacgat gctcgaattc gtctaataat tccggacgag
      181 gttttggacc tcagcagcca tcttccccta ctccggtaag taaggatggg cctaagggag
      241 caccgccttc acgccagagg aaattgatac ctcagcagca gcaacctggc tctata
//
LOCUS       XM_071886528            6249 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides callose synthase 2-like
            (LOC139904594), mRNA.
ACCESSION   XM_071886528
VERSION     XM_071886528.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6249
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6249
                     /gene="LOC139904594"
                     /note="callose synthase 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 31
                     Proteins"
                     /db_xref="GeneID:139904594"
     CDS             258..6086
                     /gene="LOC139904594"
                     /codon_start=1
                     /product="callose synthase 2-like"
                     /protein_id="XP_071742629.1"
                     /db_xref="GeneID:139904594"
                     /translation="MAYARKGSGQPQPGRLLRTQTAGNLGGEAMMDSEVVPSSLVEIA
                     PILRVANEVEPSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLEREDETT
                     LAGRTKSDAREMQSFYRHYYGKYIQALQNADKADRTRLTKAYQTAAVLFEVLKAVNLT
                     ESVEVADEILEAQIKVQEKTEMYAPYNILPLDPDSKNQAIMRYPEIQASVSALRNTRG
                     LPWPKGYNKKVDEDILDWLQSMFGFQKDNVSNQREHLILLLANIHIRQFPKLGQQPML
                     DDAAVDEVMNKLFKNYQKWCEYLGRKHSLWFPNIQKEVQQRKLLYMGLYLLIWGEAAN
                     LRFMPECLCYIYHHMAFELYGMLAGSVSSVTGENIKPAYGGEKEAFLKKVVTPIYNTI
                     AKEAQKSKGGKTKHSTWRNYDDLNEYFWSVDCFRIGWPMRADADFFHVPDEVRDNDGD
                     KPATRGRWIGKINFVEIDSYWHIFRSFDRMWSFFILCLQAMIIIAWNGSGNLGSIFDG
                     KVFTKVLSIFITAAILKLAQAIIDLVMMWKARFSMPFHVKLRYVLKTVTAAAWVIVLP
                     VTYSYSLDNPSGFGETMKNWLGKGTSSSSLFIFAILVYLAPNMLSALLFLLPFLRRYL
                     ERSDYRIVRFIMWWSQLPLYVGRGMHEDPLSLIKYTFFWVVLIVAKLAFSFYLEIKPL
                     VGPTKGIMSVHVNRYQWHEFFPQARNNIGVVIAVWAPIILVYFMDTQIWYAIFSTLFG
                     GFYGAFRRLGEIRTLDMLRSRFEQLPLAFNSNLIPAERSERTKKGLKATLSRRFTKVT
                     SKKEDAARFAQMWNKIITSFRDEDLINNREMDLLLMPYWADRDLDLIQWPPFLLASKL
                     PIALDMAKDSSGRDSELQKRLASDGYMVYAVRECYASCKNIMMFLVLGDREKAVLTEI
                     FAIVDDHIEKGDVLSEFDMSELSSLTVNFVKLIEFLIKNDKSDKDEVVIVLLNMLEVV
                     TRDIIVNEPISSLTEPSHGGSYGNNEGLQDKHYQKFFASLNFPVTRETEAWKEKIRRL
                     HLLLTEKESAMDVPSNIEARRRISFFSNSLFMDMPPAPKVRNMISFSVLTPYYNEDVL
                     FPMEILERPNEDGVSILFYLQKIFPDEWDNFLQRVDCKNEDELKGLPDMEDQLRHWAS
                     YRGQTLTKTVRGMMYYRQALELQAFLDMAKDEELMKGYKAAASNTEEYLSNERSLMTQ
                     CQAVVDMKFSYVVSCQQYGIQKRSADARAHDILRLMTTYPSLRVAYIDEVEETSDEKL
                     KKVVDRVSYYSVLVKAVPKSGDSSDPVQNQDQVIYRIKLPGKAILGEGKPENQNHAII
                     FTRGEGLQTIDMNQDNYMEEAFKMRNLLQEFLVTHGVRTPTILGLREHIFTGSVSSLA
                     WFMSMQETSFVTIGQRLLANPLKVRFHYGHPDVFERLFHLTRGGVSKASKIVNLSEDI
                     FAGFNSTLRGGNVTHHEYIQVGKGRDVGLNQISLFEAKIANGNGEQTMSRDIYRLGHR
                     FDFFRMLSCYFTTVGFYFNTLLTVLIVYVFLYGRLYLVLSGLEKELSTNRQTVNDKPL
                     QVALASQSFVQIGFLMALPMMMEIGLERGFNRAFTDFVLMQLQLASVFFTFSLGTKTH
                     YYGRTLLHGGAQYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELLILLVVYEIFAQS
                     YRGSLAYILITISMWFMVGSWLFAPFLFNPSGFEWQKIVDDWTDWSKWISNRGGIGVS
                     VDKSWESWWEKEQEHLISSGVRGTITEALLAVRFFIFQFGLVYHLSLTDSKSFMVYGI
                     SWLVIIAALLVMKAMSYWRKTLSADYQLLFRMINGLIVVAFASTLIILIALPHMTLKD
                     IIICILAFLPTGWGMLLIAQAFRPVLRKSGFWSSIRTLAQYYEIIMGLLLFTPVAFLA
                     WFPFVSEFQTRMLFNQAFSRGLQISRILGGGQKKDKSSNSKE"
     misc_feature    399..776
                     /gene="LOC139904594"
                     /note="Vta1 like; Region: Vta1; pfam04652"
                     /db_xref="CDD:461380"
     misc_feature    1206..1547
                     /gene="LOC139904594"
                     /note="1,3-beta-glucan synthase subunit FKS1, domain-1;
                     Region: FKS1_dom1; pfam14288"
                     /db_xref="CDD:464126"
     misc_feature    3384..5660
                     /gene="LOC139904594"
                     /note="1,3-beta-glucan synthase component; Region:
                     Glucan_synthase; pfam02364"
                     /db_xref="CDD:426739"
     polyA_site      6249
                     /gene="LOC139904594"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcatcactt tctttctttc acaaacaagc tacttcagct tctctgttgc gtctctatgt
       61 ttttactaat aatttttccc cttatccaaa cacacacgta aacacacaca cacacacact
      121 cttgtaagta tcaaaaaagg agtacttttg atcagaagtt cgtttcatat ggaattttaa
      181 ttttaattta aagctttcaa ttactttctg aggttaagct ttgttgttga gtagtagaat
      241 tacaaagaaa aagtagtatg gcttatgctc gaaaagggtc gggtcagccg cagccagggc
      301 ggctattgcg gactcagaca gctggtaatt tgggcggtga ggcgatgatg gatagtgaag
      361 tggtcccatc atcacttgtt gaaattgcgc ctattcttcg tgttgctaat gaagttgaac
      421 caagcaaccc tagggttgct tatctctgtc gattctatgc ctttgagaaa gcgcatagac
      481 tagatccaac ctcaagtggc cgtggtgttc gtcaatttaa gactgcctta cttcaacgtc
      541 tcgaaaggga agatgaaaca actttagcag gacgaacaaa gagtgatgct cgagaaatgc
      601 agagctttta tcgacattat tatgggaaat acattcaagc tttgcaaaat gctgataaag
      661 ctgaccgtac acgtcttaca aaagcttacc aaactgctgc tgttctattt gaggttttaa
      721 aggctgtcaa tctcacagaa tctgttgagg tggcagatga gattttggag gcacagatta
      781 aggttcagga gaagacagag atgtatgctc cttataatat acttcctctt gatcccgaca
      841 gtaaaaatca agcaattatg agatatccag agatacaagc ttctgtctct gctctccgta
      901 atacaagagg tctgccatgg ccaaaaggct acaataagaa agtggatgaa gacattttgg
      961 attggctgca gtccatgttt ggttttcaga aagataacgt ctcaaatcaa agggagcatt
     1021 tgatcttgct attggcaaat attcatattc gacaatttcc taagcttggc caacaaccta
     1081 tgttggatga tgctgcggtt gatgaagtta tgaataaact tttcaaaaat taccaaaagt
     1141 ggtgcgaata tcttggtcgc aaacatagtc tttggttccc aaatattcaa aaagaagtgc
     1201 aacaaaggaa actgttatac atgggtttgt atcttcttat atggggtgaa gctgcaaact
     1261 tgagattcat gcccgaatgt ctttgttaca tctatcacca catggcattt gaactttacg
     1321 gtatgctagc tggtagtgtg agttctgtga ccggtgaaaa tattaagcct gcatatgggg
     1381 gtgaaaagga agcattcttg aagaaagtcg tgactcctat ctacaataca atcgcaaagg
     1441 aagctcaaaa aagcaaaggg gggaagacaa aacattctac atggagaaat tatgatgacc
     1501 taaatgagta cttttggtca gtggactgct tccgtatagg atggccaatg cgtgctgatg
     1561 ctgatttctt tcatgtgccc gatgaagtta gagataatga tggggataaa ccagctacta
     1621 ggggtcgttg gataggaaag attaattttg ttgaaataga ttcatattgg catatattta
     1681 ggagttttga taggatgtgg agcttcttca tattatgttt acaggcaatg attattatag
     1741 catggaacgg atctggtaat ctgggttcca tctttgatgg aaaagtattc actaaagtgt
     1801 tgagcatctt catcacagca gccattttga agcttgcaca agctatcatt gatctggtga
     1861 tgatgtggaa agcaaggttc agcatgccat ttcatgtgaa gcttcgttac gttttgaaga
     1921 cggttactgc agctgcttgg gttatagtgt taccggttac gtattcttat agtttggaca
     1981 acccttcagg atttggagag accatgaaaa actggttagg caaaggaaca agttcctcgt
     2041 ctctattcat ttttgcgatt cttgtttact tggctccaaa catgctttct gcgttattgt
     2101 tcctcctacc ttttctccgt cgatatcttg aacgatcgga ttacagaata gtgaggttca
     2161 ttatgtggtg gtcacagctt ccactctacg tcggtagggg aatgcacgag gatcctcttt
     2221 ccctcattaa atatacattc ttctgggttg tccttatagt ggcgaagtta gctttcagct
     2281 tctatttaga gataaagcct ttagtgggtc caacaaaagg tattatgagt gttcatgtaa
     2341 accgttacca gtggcacgag ttctttcctc aagctcgaaa caatatcggt gtcgttattg
     2401 cagtttgggc tcctattatt cttgtgtatt tcatggatac tcaaatttgg tatgccatct
     2461 tttccacatt attcggtggt ttctatggcg cgtttcgacg tcttggagag atacgaactt
     2521 tggacatgtt gagaagtcgg tttgagcaac taccacttgc ttttaacagt aacttaattc
     2581 cagctgaaag aagtgaaagg actaaaaagg gactaaaggc taccctatca cgcagattca
     2641 caaaggttac atctaagaaa gaggatgcag caaggtttgc tcagatgtgg aacaaaataa
     2701 ttacaagttt cagggatgag gatttaataa ataatcggga aatggaccta ttactcatgc
     2761 catattgggc agaccgtgat ttggatctca ttcagtggcc tcctttttta cttgccagca
     2821 agcttcctat agcattggat atggcaaaag atagtagtgg aagggattct gaactgcaaa
     2881 agaggctcgc gtctgacggt tatatggttt atgcagttcg cgaatgctat gcctcgtgca
     2941 aaaatataat gatgtttttg gttttagggg atcgagagaa ggctgtcctg accgagatat
     3001 ttgcgatagt tgatgatcat atagagaagg gagatgtatt aagcgagttt gatatgagtg
     3061 aactgtctag cctcactgtt aattttgtta agcttattga gtttttgata aaaaatgaca
     3121 aaagtgacaa ggatgaagtt gtcattgtgt tactcaacat gctggaagta gtgacaagag
     3181 acataatagt aaacgagccg atttctagtt tgacagaacc gagccatggt ggttcttatg
     3241 gaaataatga aggcctgcaa gataaacatt atcaaaagtt ctttgcatct ctcaattttc
     3301 ctgttacaag agaaacagaa gcatggaaag agaaaataag aaggcttcat ctgttgctca
     3361 ccgaaaagga atctgctatg gatgtgccat caaacataga agccagaagg cgcatctctt
     3421 tcttctcaaa ttcattgttt atggacatgc ccccggcacc taaagttcga aacatgatat
     3481 ctttctcggt tcttaccccg tactacaatg aggatgtcct tttccccatg gaaatcttgg
     3541 aaaggccaaa tgaagacggg gtttcgatcc tcttttattt gcagaaaatc ttcccagatg
     3601 aatgggacaa tttccttcaa cgagtagatt gcaaaaatga agatgaacta aaaggtcttc
     3661 cggatatgga agatcagctt cgccattggg catcatatag aggtcaaaca ctaactaaaa
     3721 ccgtacgagg tatgatgtat tatcggcaag ctttggaact tcaggctttc cttgacatgg
     3781 caaaagatga agagttgatg aaaggttaca aggctgctgc atctaatacc gaagaatatt
     3841 taagcaatga aagatcgtta atgacacaat gtcaggcagt ggttgatatg aagttctcgt
     3901 atgtggtatc ttgccaacaa tatggcattc aaaaacgatc tgcggatgct cgtgcccatg
     3961 acattctgag gctcatgaca acgtatcctt ctcttcgtgt tgcatatatt gatgaggttg
     4021 aagaaacgag tgatgaaaag ttgaaaaagg tggttgaccg cgtttcatat tattcagttc
     4081 ttgtgaaagc tgtgcctaag tctggtgact cctcagaccc agttcaaaac caagatcagg
     4141 ttatatatcg tataaaactt cctggaaaag ccatattggg cgagggaaag ccagaaaacc
     4201 aaaaccatgc aataattttt acacgtggag agggcctgca aacaatagat atgaaccaag
     4261 acaactacat ggaagaagcc ttcaaaatga gaaatttgct ccaagagttc cttgtcacac
     4321 atggtgtccg cacaccaacc atacttggcc ttagggagca tatatttact ggcagtgttt
     4381 cttcccttgc gtggttcatg tcaatgcaag agacaagttt tgttactatt gggcagagat
     4441 tgttggctaa cccgttaaaa gttagatttc attacgggca tcctgatgtg tttgaaagac
     4501 tatttcactt gactagagga ggagtcagca aggcttccaa aatcgttaac ctgagcgagg
     4561 atatctttgc aggtttcaat tctacattac gtggaggaaa cgttacacat catgaataca
     4621 tacaagttgg taaaggaaga gacgttggtc ttaaccaaat ctctttgttt gaagcaaaaa
     4681 tagcaaacgg aaacggtgaa caaacaatga gtcgtgatat atacaggctt gggcaccgtt
     4741 tcgatttctt tcgcatgctc tcatgctact tcactaccgt aggattctat tttaatacac
     4801 tgctcaccgt gcttattgta tacgtgtttc tctatggacg actttatctt gttctaagtg
     4861 gactagagaa agagttaagt acaaataggc aaaccgtgaa cgataaacct cttcaagtag
     4921 cccttgcgtc tcaatctttt gttcaaatcg gttttcttat ggcccttcca atgatgatgg
     4981 aaataggtct cgaacgaggg tttaaccgag catttaccga ttttgtgctc atgcaactac
     5041 aattagcttc ggtatttttt actttctcac ttggaacaaa aacacattat tatggaagaa
     5101 ctttacttca tgggggtgca caatatcgag ctactggccg tggattcgtt gtgtttcatg
     5161 ccaagtttgc cgagaattat cgactttact cccggagtca ttttgtcaaa ggaatcgagc
     5221 ttttgatctt acttgttgta tacgaaatat tcgctcaatc gtatagaggt tcacttgcat
     5281 atattttgat tacgatatcc atgtggttta tggtgggatc atggcttttt gccccgtttc
     5341 tttttaatcc gtcagggttc gagtggcaaa agattgttga tgattggacc gactggagca
     5401 agtggataag taaccgtgga ggaatcggtg tttcggttga taaaagttgg gagtcatggt
     5461 gggaaaaaga acaagagcat ctcatatctt ctggggtacg cggtaccatt accgaagctt
     5521 tgttggcggt tcggttcttt atttttcaat ttggtctcgt gtatcatctc agcttaacag
     5581 atagcaaaag ttttatggtt tatggaattt catggcttgt tataattgca gcattactag
     5641 taatgaaggc catgtcatat tggagaaaaa ctcttagtgc tgactatcag cttctgttcc
     5701 gaatgatcaa cggtttaatc gttgttgcgt ttgcttctac tttgattatc ttgattgcac
     5761 tacctcatat gactttaaag gatataatta tatgcattct cgcgtttttg cctactggtt
     5821 gggggatgct actgattgcg caagcattca gaccagtttt aagaaaatct ggattttggt
     5881 catcaatcag aaccttagca caatactatg aaataatcat ggggttattg ctgttcactc
     5941 cagttgcgtt tctggcctgg tttccgtttg tttctgaatt tcaaacacgt atgttattca
     6001 accaagcctt cagtagaggt ctgcagattt ctcgtattct tggtggtgga cagaagaaag
     6061 acaaatcctc caacagcaaa gagtaacact gtcagtcatt gtatatacct atctttactg
     6121 atcacaagtt tagtgatcac catcatacat ggaatgtaaa atgacaacaa gatacacgtg
     6181 tgaataatat atagatgatg atgatgctat ttgctcacaa gcatattgat tttaggttct
     6241 tctgttgtg
//
LOCUS       XM_071886529            2251 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor TFIID subunit 12b (LOC139904595), transcript variant X1,
            mRNA.
ACCESSION   XM_071886529
VERSION     XM_071886529.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2251
                     /gene="LOC139904595"
                     /note="transcription initiation factor TFIID subunit 12b;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139904595"
     CDS             202..1947
                     /gene="LOC139904595"
                     /codon_start=1
                     /product="transcription initiation factor TFIID subunit
                     12b isoform X1"
                     /protein_id="XP_071742630.1"
                     /db_xref="GeneID:139904595"
                     /translation="MADGSSSSSPIQSTITNANTPLDQLQHSSNVLSSQTLASSIDTN
                     IAQITSPSLPQSQSNVLSPQQQQQLLQQQNNLIGTPNFQIQQPSNNLQRSPSIPRLNQ
                     IQQQQYNLTAGNAARLYGQMNFANGQQQQQQQQQQIPQQQQQQNQQIGNANLNRSGLM
                     GQTGHLSMLPGQAAAAAQLNLQSQLLASSPRQKVGLVQGTQFHPGNTPGQSLQGMQMG
                     MNMMGNYNMNSQIRANGSLAFNQQRMNQGQMRPQLSQQLSQQNALASNQKLQAQGLSR
                     ASFMNSQLSALGPNGQLAMMQNNMTQQQWSKQMPNMSAPNSPSFRLQQQRQQQALLGQ
                     QLPSSQLQNSMSLNQQQLQQMVQQQQQQQNQQQPIGHQQQQLPTQQHLLQQQSPRIGG
                     SAGQKSVSLTGSQPDATASGTTTPGGSSSQGTDASNHLLGKRKIQDLVAQVDPNAVLD
                     PDVEDLLLMLADEFIDSVTSFGATLAKHRKSSVVESKDVLLHLERNYKLKIPGFSSEE
                     KKQEQNNPESDLHKKRLNMIQGLMENSLSETNMGNNKQFGPNSLIRPSPSSDQLNAHS
                     IPSQNQQHKQAFDGY"
     misc_feature    1483..1704
                     /gene="LOC139904595"
                     /note="histone-fold domain found in transcription
                     initiation factor TFIID subunit 12 (TAF12) and similar
                     proteins; Region: HFD_TAF12; cd07981"
                     /db_xref="CDD:467025"
     misc_feature    order(1483..1494,1504..1506,1516..1518,1525..1530,
                     1570..1572,1579..1587,1591..1599,1606..1611,1618..1620,
                     1627..1629,1651..1659,1666..1671,1678..1680,1690..1692,
                     1696..1698,1702..1704)
                     /gene="LOC139904595"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467025"
     misc_feature    order(1546..1548,1558..1560,1570..1572,1633..1641,
                     1672..1674,1684..1686)
                     /gene="LOC139904595"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467025"
ORIGIN      
        1 aacattacta ctattcacac tctgctatct tcatcttctt tatttatact caccgatcat
       61 caactcatat tcatgtttat tcatacgtga tatagataca tagatagata aattatacgg
      121 agtatttaat aattaattca atcaatcaat cattctgtaa taagaataat tcttgatttg
      181 atttgatttg attatattat tatggctgat ggttcgtcat catcatcccc aattcaatca
      241 accatcacca acgcaaacac accactcgat caattacaac actcctcaaa tgttttatca
      301 tcacaaaccc tagcttcttc tattgacaca aacattgctc aaatcacttc accatcatta
      361 cctcaatctc aatctaatgt tttatcacct caacaacaac aacaattact tcaacaacaa
      421 aataatttaa tcggaacacc taattttcaa attcagcaac cctcgaataa tttacagcgg
      481 tctccatcaa ttccacgttt aaatcaaatt caacagcaac agtataattt gactgccggc
      541 aatgctgcca ggctttacgg ccagatgaat ttcgctaacg gccaacaaca acaacaacaa
      601 caacaacaac agattccaca acagcagcag caacagaatc aacagattgg aaatgctaat
      661 ttgaaccgct ccggtttaat gggtcaaacc ggccatctct ctatgttacc cggtcaagct
      721 gctgctgctg ctcagctcaa tctacaatct caattattag catcatcgcc gaggcaaaaa
      781 gtagggttag tacaggggac gcaatttcat ccaggcaaca caccagggca atcattgcaa
      841 ggaatgcaaa tggggatgaa tatgatggga aattacaata tgaactctca aattagggca
      901 aatgggtcac ttgctttcaa tcagcaaagg atgaatcaag ggcagatgag accacaattg
      961 tcacaacaac tgtctcagca aaatgcacta gcttctaatc agaaactgca ggcacagggc
     1021 ctatcgaggg cgtcatttat gaactcacag ttgtcagctt taggtccaaa tggtcaatta
     1081 gccatgatgc aaaacaatat gacgcaacaa caatggtcga agcaaatgcc caacatgtca
     1141 gcacctaatt ctccttcatt tcgccttcaa caacaaaggc aacaacaggc acttttgggt
     1201 caacaacttc cttcttcaca attgcaaaat tctatgtctt tgaaccaaca acaactacaa
     1261 caaatggttc agcaacaaca gcagcagcaa aatcagcaac aacctattgg gcatcaacag
     1321 caacaattgc caactcagca acaccttttg cagcagcagt caccaaggat tggaggatct
     1381 gcgggtcaaa aatctgtaag tttaaccgga tcacaacctg atgcaactgc ttcggggaca
     1441 accacacctg gtggaagctc aagccaagga acagatgcta gcaatcatct gcttggtaaa
     1501 cggaaaattc aagatttggt tgcacaggtt gatccaaatg cagttttaga tcccgacgtt
     1561 gaggatcttc ttttgatgct tgctgatgaa tttattgatt cggttacatc atttggagct
     1621 accttggcca agcatcgcaa atcttcagtt gtagaatcaa aagatgtgtt gctacaccta
     1681 gaaaggaatt acaaattgaa aattcccggg ttctcaagtg aagaaaagaa acaagaacaa
     1741 aataatccag aaagtgactt gcacaagaag cgtctcaata tgatacaagg actgatggag
     1801 aactcattat ctgaaacaaa catgggtaat aataagcaat ttggacccaa ttcactgatc
     1861 aggccttcac caagttcaga ccagctaaac gctcattcaa tcccttctca aaatcagcaa
     1921 cataaacaag cgtttgatgg ttactaggtt gaaaggtgtg aagcacatga agtgtatgat
     1981 ataggaaata ggggggaaag tttaagttaa caggcagaca atatagttat tatgcagctt
     2041 aattgatgga tggtaatata tcaaaaacac acgtttaacc tttttttttt tttttttttt
     2101 tttttttaca gattgtggtt atagagatgg atgttcttac tttgtttgca actggtttta
     2161 ggatgttatg ttaatcaatt ctagattttg aatatccaga tgctgtgtga tgctccatga
     2221 ttttgttatt gcctcaattg ttcataaact c
//
LOCUS       XM_071886530            2242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor TFIID subunit 12b (LOC139904595), transcript variant X2,
            mRNA.
ACCESSION   XM_071886530
VERSION     XM_071886530.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2242
                     /gene="LOC139904595"
                     /note="transcription initiation factor TFIID subunit 12b;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139904595"
     CDS             202..1938
                     /gene="LOC139904595"
                     /codon_start=1
                     /product="transcription initiation factor TFIID subunit
                     12b isoform X2"
                     /protein_id="XP_071742631.1"
                     /db_xref="GeneID:139904595"
                     /translation="MADGSSSSSPIQSTITNANTPLDQLQHSSNVLSSQTLASSIDTN
                     IAQITSPSLPQSQSNVLSPQQQQQLLQQQNNLIGTPNFQIQQPSNNLQRSPSIPRLNQ
                     IQQQQYNLTAGNAARLYGQMNFANGQQQQQQQQQQIPQQQQQQNQQIGNANLNRSGLM
                     GQTGHLSMLPGQAAAAAQLNLQSQLLASSPRQKVGLVQGTQFHPGNTPGQSLQGMQMG
                     MNMMGNYNMNSQIRANGSLAFNQQRMNQGQMRPQLSQQLSQQNALASNQAQGLSRASF
                     MNSQLSALGPNGQLAMMQNNMTQQQWSKQMPNMSAPNSPSFRLQQQRQQQALLGQQLP
                     SSQLQNSMSLNQQQLQQMVQQQQQQQNQQQPIGHQQQQLPTQQHLLQQQSPRIGGSAG
                     QKSVSLTGSQPDATASGTTTPGGSSSQGTDASNHLLGKRKIQDLVAQVDPNAVLDPDV
                     EDLLLMLADEFIDSVTSFGATLAKHRKSSVVESKDVLLHLERNYKLKIPGFSSEEKKQ
                     EQNNPESDLHKKRLNMIQGLMENSLSETNMGNNKQFGPNSLIRPSPSSDQLNAHSIPS
                     QNQQHKQAFDGY"
     misc_feature    1474..1695
                     /gene="LOC139904595"
                     /note="histone-fold domain found in transcription
                     initiation factor TFIID subunit 12 (TAF12) and similar
                     proteins; Region: HFD_TAF12; cd07981"
                     /db_xref="CDD:467025"
     misc_feature    order(1474..1485,1495..1497,1507..1509,1516..1521,
                     1561..1563,1570..1578,1582..1590,1597..1602,1609..1611,
                     1618..1620,1642..1650,1657..1662,1669..1671,1681..1683,
                     1687..1689,1693..1695)
                     /gene="LOC139904595"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467025"
     misc_feature    order(1537..1539,1549..1551,1561..1563,1624..1632,
                     1663..1665,1675..1677)
                     /gene="LOC139904595"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467025"
ORIGIN      
        1 aacattacta ctattcacac tctgctatct tcatcttctt tatttatact caccgatcat
       61 caactcatat tcatgtttat tcatacgtga tatagataca tagatagata aattatacgg
      121 agtatttaat aattaattca atcaatcaat cattctgtaa taagaataat tcttgatttg
      181 atttgatttg attatattat tatggctgat ggttcgtcat catcatcccc aattcaatca
      241 accatcacca acgcaaacac accactcgat caattacaac actcctcaaa tgttttatca
      301 tcacaaaccc tagcttcttc tattgacaca aacattgctc aaatcacttc accatcatta
      361 cctcaatctc aatctaatgt tttatcacct caacaacaac aacaattact tcaacaacaa
      421 aataatttaa tcggaacacc taattttcaa attcagcaac cctcgaataa tttacagcgg
      481 tctccatcaa ttccacgttt aaatcaaatt caacagcaac agtataattt gactgccggc
      541 aatgctgcca ggctttacgg ccagatgaat ttcgctaacg gccaacaaca acaacaacaa
      601 caacaacaac agattccaca acagcagcag caacagaatc aacagattgg aaatgctaat
      661 ttgaaccgct ccggtttaat gggtcaaacc ggccatctct ctatgttacc cggtcaagct
      721 gctgctgctg ctcagctcaa tctacaatct caattattag catcatcgcc gaggcaaaaa
      781 gtagggttag tacaggggac gcaatttcat ccaggcaaca caccagggca atcattgcaa
      841 ggaatgcaaa tggggatgaa tatgatggga aattacaata tgaactctca aattagggca
      901 aatgggtcac ttgctttcaa tcagcaaagg atgaatcaag ggcagatgag accacaattg
      961 tcacaacaac tgtctcagca aaatgcacta gcttctaatc aggcacaggg cctatcgagg
     1021 gcgtcattta tgaactcaca gttgtcagct ttaggtccaa atggtcaatt agccatgatg
     1081 caaaacaata tgacgcaaca acaatggtcg aagcaaatgc ccaacatgtc agcacctaat
     1141 tctccttcat ttcgccttca acaacaaagg caacaacagg cacttttggg tcaacaactt
     1201 ccttcttcac aattgcaaaa ttctatgtct ttgaaccaac aacaactaca acaaatggtt
     1261 cagcaacaac agcagcagca aaatcagcaa caacctattg ggcatcaaca gcaacaattg
     1321 ccaactcagc aacacctttt gcagcagcag tcaccaagga ttggaggatc tgcgggtcaa
     1381 aaatctgtaa gtttaaccgg atcacaacct gatgcaactg cttcggggac aaccacacct
     1441 ggtggaagct caagccaagg aacagatgct agcaatcatc tgcttggtaa acggaaaatt
     1501 caagatttgg ttgcacaggt tgatccaaat gcagttttag atcccgacgt tgaggatctt
     1561 cttttgatgc ttgctgatga atttattgat tcggttacat catttggagc taccttggcc
     1621 aagcatcgca aatcttcagt tgtagaatca aaagatgtgt tgctacacct agaaaggaat
     1681 tacaaattga aaattcccgg gttctcaagt gaagaaaaga aacaagaaca aaataatcca
     1741 gaaagtgact tgcacaagaa gcgtctcaat atgatacaag gactgatgga gaactcatta
     1801 tctgaaacaa acatgggtaa taataagcaa tttggaccca attcactgat caggccttca
     1861 ccaagttcag accagctaaa cgctcattca atcccttctc aaaatcagca acataaacaa
     1921 gcgtttgatg gttactaggt tgaaaggtgt gaagcacatg aagtgtatga tataggaaat
     1981 aggggggaaa gtttaagtta acaggcagac aatatagtta ttatgcagct taattgatgg
     2041 atggtaatat atcaaaaaca cacgtttaac cttttttttt tttttttttt ttttttttac
     2101 agattgtggt tatagagatg gatgttctta ctttgtttgc aactggtttt aggatgttat
     2161 gttaatcaat tctagatttt gaatatccag atgctgtgtg atgctccatg attttgttat
     2221 tgcctcaatt gttcataaac tc
//
LOCUS       XR_011778902             414 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904596), ncRNA.
ACCESSION   XR_011778902
VERSION     XR_011778902.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..414
                     /gene="LOC139904596"
                     /note="uncharacterized LOC139904596; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904596"
     ncRNA           1..414
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904596"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904596"
ORIGIN      
        1 attgaatttc ataaaagggg cttgctcaaa gaagtttcta aagccattca atgataatac
       61 tatttttgaa aaaatgaatt tgttcattac cgaaagcata ctttgagaat cgcatccgat
      121 aaagtagact gcgtatgaag aaatgactac actcgatggt acaaatctct cgcaaggcga
      181 tgcgacgtaa tcaacaactt aataggtttg gaagacggat gaaggtttaa tcggttgatt
      241 tcatccaccg ttgtttgttg gaagcctcaa tattttcgcg tataaaggta attttattat
      301 ttttttggca aatttcttat atttgatgtt tttatgttca tgcttttttg ttttttttca
      361 atgttttttc ttcactattt gattaatgtg tgtacgttgc ttgattaaga attt
//
LOCUS       XM_071886532            1612 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides IAA-amino acid hydrolase
            ILR1-like 4 (LOC139904597), mRNA.
ACCESSION   XM_071886532
VERSION     XM_071886532.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1612
                     /gene="LOC139904597"
                     /note="IAA-amino acid hydrolase ILR1-like 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 37 Proteins"
                     /db_xref="GeneID:139904597"
     CDS             86..1390
                     /gene="LOC139904597"
                     /codon_start=1
                     /product="IAA-amino acid hydrolase ILR1-like 4"
                     /protein_id="XP_071742633.1"
                     /db_xref="GeneID:139904597"
                     /translation="MMKLSTWVSIILIVSLYKPQISTGVSVSEFPKQFLEFAKKDEIF
                     NWMVGIRRKIHENPELGYEEIETSKLIRQELDILGVSYEYPIAVTGVVGFIGSGEPPF
                     VALRADMDALPMQEMVEWEHTSKVPGKMHACGHDGHVTMLLGAARILKTHSHLLKGTV
                     VLVFQPAEEGGGGAKVVVDSGSLKNVKAIFGLHVAPEKPLGQAFSRSGTILAASGFFE
                     AVITGKGGHAAIPQRSIDPILAASNVVVSLQHLVSREADPLDSQVVTVGMFHGGGAFN
                     VIPDSVTIGGTFRAFSKESFMKLKQRIEEVIVGQATVNRCNATVEFSTKAKPFFPATI
                     NHESLHKFFQDVAANVLGVNNVKEMPPLMGAEDFSFYQEVIPGYFYFIGMNNGKNENI
                     PLLHSPYFQLNEDVLPYGAAMQASLAATYLSQSQHLDRRDEL"
     misc_feature    224..1351
                     /gene="LOC139904597"
                     /note="M20 Peptidase Indole-3-acetic acid amino acid
                     hydrolase; Region: M20_IAA_Hyd; cd08017"
                     /db_xref="CDD:349938"
     misc_feature    order(482..484,488..490,590..592,662..664,1271..1273)
                     /gene="LOC139904597"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:349938"
     misc_feature    order(731..733,797..802,812..814,821..823,830..832,
                     881..901,911..916,920..922,938..946)
                     /gene="LOC139904597"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:349938"
     polyA_site      1612
                     /gene="LOC139904597"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcattagaga cacgcacaca aattagctca tttcccatcc ttccaaaaac tcaattgtat
       61 cattagttca ctgaaactac agaaaatgat gaaactttcc acctgggtat caataatttt
      121 aatcgtctcg ctatataaac ctcaaatctc aaccggggtt tctgtttctg agtttccaaa
      181 gcaatttctt gaatttgcta aaaaagatga aatttttaat tggatggttg ggattagaag
      241 aaagatacat gagaatcctg aattgggtta tgaagaaatt gaaacaagta aacttattag
      301 acaagaatta gatatattag gggtttctta tgaataccca attgcagtta caggtgttgt
      361 tggattcatt ggctctggtg aacctccttt tgttgcttta agggctgata tggatgctct
      421 tcctatgcag gaaatggtgg aatgggaaca tacgagtaaa gttcctggaa agatgcatgc
      481 ttgtggtcat gatggtcatg taaccatgct tcttggtgca gccaggattc ttaaaactca
      541 tagccatctt ttgaagggaa ccgtagtttt ggtttttcaa ccggcagaag aaggaggagg
      601 cggtgcaaag gtggtggtag atagtggatc tcttaagaac gtgaaagcga tatttggttt
      661 acatgttgct ccagagaaac ctttgggtca agcgttctct cgatccggta ctattttggc
      721 ggcaagtggc ttttttgaag cggtcataac cggaaaaggc ggtcatgccg ccattcctca
      781 gcgctcaatt gatcctatat tagcagcctc aaatgttgtt gtcagtttac aacatcttgt
      841 atcaagagaa gccgatcctc ttgattctca ggttgttaca gttggcatgt tccatggagg
      901 tggtgctttt aatgtcatac cagattcagt caccattggt ggaacctttc gtgctttctc
      961 caaagaaagt ttcatgaaac tcaaacaacg aatagaggag gtgattgtag ggcaagcaac
     1021 ggttaatagg tgtaatgcaa ccgttgagtt cagtacaaag gccaaacctt ttttccctgc
     1081 caccataaat cacgagagct tgcacaagtt cttccaagat gttgctgcaa acgttcttgg
     1141 tgtcaataac gttaaagaaa tgccgccatt aatgggagct gaagattttt ctttctacca
     1201 agaggttata cctggttatt tctactttat tggtatgaac aacggaaaaa atgaaaatat
     1261 cccgttgcta cattctccgt atttccaact taatgaagat gttcttccat atggcgctgc
     1321 aatgcaagcg tctttggctg ctacatacct cagtcaaagt caacatctag atcgacgaga
     1381 tgaattatga agtgtttaca ttaggaagtg tcttggttat ctcatatggc ctactttgcg
     1441 cgagttatat tgttcctgct aacatggact atttttaagc catataaaca attgatgtca
     1501 ttgacaatgg gtctatttaa gtttgacttt tgtctaaaat gcatgatcat aataattatg
     1561 ctttagtttg ccttgtaaat gtaaatgtaa attaagtgaa ctgattttat aa
//
LOCUS       XR_011778903             582 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904598), ncRNA.
ACCESSION   XR_011778903
VERSION     XR_011778903.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..582
                     /gene="LOC139904598"
                     /note="uncharacterized LOC139904598; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904598"
     ncRNA           1..582
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904598"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904598"
ORIGIN      
        1 tgaaatcgat tgtgaacata tatagaagct tgaggataag tggatgaata cagggacgta
       61 tcaataaccg acagccgatg aagacatcaa ttttagggat gtatatgcta ttattctaag
      121 ttatacatga caattgatat tgggtgggtg tcaatctcaa gaggatgaga ttaaatacta
      181 aggtgttcgc agtctgatga agccttgcaa atactatcaa gaagatacat cactctaatg
      241 aaaccttgca attaccatca ccctgtcacc tgtgactgca catattggag cagagcaacc
      301 caaggtaatg atttgcttta tggtgccaag gacaagaatc taaaagtgaa aggacttatt
      361 actactaata tgctttcaga gatgattacg atttgtgctt atgatttcta ttggccaagg
      421 tcaagaatct tcggattttg atctggtaat aaaaacatct gtagatagag aacaagtgga
      481 agccgggtta ctaccataaa tgcaacgctg aattgaactt acaggttgct tatcacaaac
      541 aagcaagtgc taggttttta tgtgcaaaac atagcaactt tt
//
LOCUS       XM_071886533            2254 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904599), mRNA.
ACCESSION   XM_071886533
VERSION     XM_071886533.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2254
                     /gene="LOC139904599"
                     /note="uncharacterized LOC139904599; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139904599"
     CDS             131..2017
                     /gene="LOC139904599"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742634.1"
                     /db_xref="GeneID:139904599"
                     /translation="MDFDEYDYLEKMVENSDVPNSEKRANGGEESGKNEDKERRQSSR
                     HRSDKNDDDRRSKRTKSGEELRDRDKERDSSRHRSSPKEGDKSDRDRQRSSRETRDRD
                     REKNREERNGKGRDTDRERDGDRDRDRGADREKNGKGRDTDRERDRDRGDDRVRGRRE
                     HGREHEKEDEREKDKERERSHRSGSRSDRVRSERDREKSREWEVKDREKEREKEREKE
                     KEREKERETREPERESRRYKDKKEGPIEPEVDPERDQRTVFAYQISLKADERDVYEFF
                     SRAGKVRDVRLIMDRNSRRSKGVGYIEFYDSMSVPMAIALSGQPLLGNPVMVKPSEAE
                     KNLVQSTATAAGVAGTGAYAGGARKLYVGNLHYNMKEDQLRQVFESFGTVELVQLPTD
                     ETGNCKGFGFIQFARLEDARAAQSLNGQLEIAGRMMKVSAITDQSGMQEMGVNPGDFD
                     DDDGGGLSLNARSRALLMQKLDRTGTIPSVMGSMGVPTTNSMGLPLPPAPGVVSLPGL
                     ATMSGAALSVPPVTVPSIESIGVPSECLLLKNMFDPELEDEQNFDLDIMEDVQSECSK
                     YGKLRHIYVEKNSAGFVYLRFENTQSSVAAQRALHGRWFAGKMITATFMVPQDYQVKF
                     PDSI"
     misc_feature    287..2011
                     /gene="LOC139904599"
                     /note="splicing factor, CC1-like family; Region: SF-CC1;
                     TIGR01622"
                     /db_xref="CDD:273721"
     polyA_site      2254
                     /gene="LOC139904599"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cagtcatttt tcttcacttc tctcttcttt catttttatg aacttcctgc tcaaatccaa
       61 tacacaaaca aagaattttt ctcacccggc atttatcaat tagagttggt aactattagt
      121 tgagcatcca atggattttg acgagtatga ttacttggaa aaaatggtgg aaaattctga
      181 tgtaccaaac tcagagaaaa gagctaatgg cggtgaagaa agtggtaaaa atgaagataa
      241 ggaaagacgg cagagctcta gacatcggag tgataagaac gacgatgatc ggaggtcaaa
      301 gcgtacaaaa tccggtgaag agttgcgtga tcgtgataaa gaaagggatt cctcacgcca
      361 ccgttcatct ccaaaagaag gggataaaag tgatagagac agacaaagga gtagtcgtga
      421 aactagagac agagataggg agaagaatag ggaggagagg aatggtaagg gtagggatac
      481 tgacagagaa agagacgggg acagggacag agacagaggt gcagacaggg agaaaaatgg
      541 taagggtagg gacacagaca gagaaagaga cagggacaga ggtgatgaca gggtgagggg
      601 aaggagggaa catggacgtg aacatgagaa agaggacgag agagaaaaag ataaagaacg
      661 cgagagatca catcggagtg gtagcaggtc agatagagtc agaagtgaac gggataggga
      721 gaagagtcgt gaatgggagg ttaaagatag ggaaaaagaa cgggaaaaag aaagagaaaa
      781 ggaaaaggaa agagaaaaag aaagggagac tagagaacct gagcgagaga gcaggcgata
      841 taaagacaaa aaggaaggac cgatagagcc agaggttgac cctgaacgag atcagcggac
      901 ggtctttgca tatcagatat ctctgaaggc tgatgaaaga gatgtctacg aatttttctc
      961 aagggctggc aaggttcgcg atgtacgtct tattatggac cgtaactcaa gacgctccaa
     1021 aggggttggg tacatcgagt tttatgattc aatgtctgtt cctatggcaa ttgcgctctc
     1081 tggtcaacct cttcttggta atcctgtgat ggtcaaacca tctgaagctg aaaagaatct
     1141 tgtacagtca actgcaactg ctgctggagt tgcaggtacc ggtgcatacg caggcggggc
     1201 tagaaaattg tatgttggca atctgcatta caatatgaag gaggatcaac ttcgtcaggt
     1261 atttgaatcg tttggtactg tagagctcgt gcaattacct actgacgaga cgggaaattg
     1321 taaaggtttt ggttttattc agtttgctcg acttgaagat gccagggctg ctcaaagttt
     1381 gaatggacag ttggagattg ctggtcgaat gatgaaggtg tctgctatta ctgatcaatc
     1441 tggaatgcaa gaaatgggtg ttaatcctgg tgatttcgac gacgatgatg gtggcggctt
     1501 gtctttgaat gcacgttctc gggcacttct aatgcagaag ctggatcgta ctggaaccat
     1561 accaagtgtt atgggctcaa tgggggtccc aaccactaat agcatgggcc taccgctacc
     1621 accagctccg ggggttgttt ctcttcccgg ccttgctaca atgtctggtg cagctctttc
     1681 tgttccgcct gttactgttc catccataga gagcattggt gttcctagtg aatgtctgtt
     1741 gttgaaaaac atgtttgatc ctgaattgga ggacgagcaa aattttgatt tagatatcat
     1801 ggaagacgtt cagtctgaat gctcaaagta tggaaagcta aggcatatct atgtggagaa
     1861 gaacagtgct ggatttgtat atttgcgttt tgagaacacg caatcttcag tagcagctca
     1921 acgtgctctt catgggagat ggtttgccgg gaagatgatc accgctacat ttatggtgcc
     1981 tcaagattac caggtcaaat ttccagacag catctagcgg acagttgtaa atcgaaacag
     2041 caacgagtcc atttttccag gccatatgta gaggatgttg ttatagatgt ggttttataa
     2101 aattaagaga tttcaactgt tttctggttg tgcatttaga ttgcttctaa agggtgtaaa
     2161 agaaacaatg tttagaactg atctatttca gcatttgtgc tttcatcatc attattttat
     2221 aagtaatatt tggggaaacc cttggatttt ttta
//
LOCUS       XR_011778904             288 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904600), ncRNA.
ACCESSION   XR_011778904
VERSION     XR_011778904.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..288
                     /gene="LOC139904600"
                     /note="uncharacterized LOC139904600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904600"
     ncRNA           1..288
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904600"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904600"
ORIGIN      
        1 tctattggtg caagtgaggg aaaagatgga agtaaaatgg gagttattgt agtttccagg
       61 tagccgcatt tgttgctaca ttacatgatc catcaatgtt tgaagcaagc attcaatttt
      121 cattaaaaca gctgctggaa ttgtaataat caaaagttgt tcttgatttg tgaacttgtg
      181 gaagcattca acctgctgat cattgaactg attatttcaa gatttttggt ttagagagga
      241 agtttgatat tcatgatgga agtttggaag gaacttataa aagttggc
//
LOCUS       XR_011778905             455 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904602), ncRNA.
ACCESSION   XR_011778905
VERSION     XR_011778905.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..455
                     /gene="LOC139904602"
                     /note="uncharacterized LOC139904602; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904602"
     ncRNA           1..455
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904602"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904602"
ORIGIN      
        1 agcttattgt atgagagttt gttgttgtcg ttattaaata cgtcttatgt gtctccgaga
       61 caagttgcag ttagaaatat attgcgttat cgtaaacgta tggcgactac gggttcttat
      121 caatcgcatt tggttactga cactttcgga acgtctacta ttgttaggtt tacaagatat
      181 acctaatgat gccactttga atgcgtctaa tattgaatgc cgcgtacaat cattcggtct
      241 tagcgatcat attgctggta tagctgatat tgtggcaggt ctttctaaat tgcttcatgt
      301 tgtggtactg tattaattag ttttcataat tatttcagca cttttttagt catagatatg
      361 tggctgctca ttttttgtgg caaaatgtta ataggattag atttataatg tcgtttgctg
      421 taatttgtat ttagttaact gtatggttat acatg
//
LOCUS       XR_011778906             335 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904603), ncRNA.
ACCESSION   XR_011778906
VERSION     XR_011778906.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..335
                     /gene="LOC139904603"
                     /note="uncharacterized LOC139904603; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904603"
     ncRNA           1..335
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904603"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904603"
ORIGIN      
        1 tttggtacag tttcaccggc tgttggtaca gtttcaattg ctaggatagt tgatatgaaa
       61 aggagagaag gacatgaagt ttcagcaatt gatagataca gaattgctca tttttcaaaa
      121 aagaaaaaaa aatgataaat gaagaggcag aaaacacttt gaaacaattg caaagtgagg
      181 aaactagttc ttcatgtact gcagcagaga tatgtttgaa aacgctaaaa cgtattcctg
      241 gatacgtaaa agggcgttca acttcaacga aacatgtttt ggctatggaa aatttacgaa
      301 tggagttaga gtctgaaaat aaaagatcaa cagct
//
LOCUS       XR_011778907             735 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904604), ncRNA.
ACCESSION   XR_011778907
VERSION     XR_011778907.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..735
                     /gene="LOC139904604"
                     /note="uncharacterized LOC139904604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904604"
     ncRNA           1..735
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904604"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904604"
ORIGIN      
        1 ttcgtttttt atggattaaa attcaaatcc ctaatttgta acgtaatcat cgatttggag
       61 gtgaacgatt ttgaaaaaca aatccctgta aaattccaaa ccaacttctt agtgcgtaca
      121 ttcaaaagca aaaaattgtt cattcgaatg ctaaaaagtc gatcaataat caaggtgttc
      181 ttccgggtta ttcaagatag ccattactat ctcatttgtt tcaaattgaa ggtaggaaag
      241 gtggtactag tagacaatct gctagatatg gttccattca aagaaagata caacaatttc
      301 ccttacaaac cggtagaaaa tatcaattgt gaagtatctg aagtctattg gtcatgtaaa
      361 ggctaccatt attgaggctg cggaagtcgt ggtcccttaa ttgagttagg tcaagatgag
      421 gaattttgta gattgtgaag gagttgtaat gcgcacatgg aaatatctgt tggaggaaat
      481 ataagtagat gggattgtgg acttgatgta gaatggtaat cacagaaagg ctgaggtcca
      541 gctttattcg ggctgttatg caacatggct aaaggtgtgt ggtggggaaa gtaaggattg
      601 aataatgtca tattgattac gcttgagatt ttttgttcgt ttttttaaag ttagacggtt
      661 ttaaggagtg acgaacaagg ttttcggtaa ctagcaagtc ttatgaattc tatgttatgg
      721 tacatggttt aattg
//
LOCUS       XR_011778908             304 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904606), transcript variant X1, ncRNA.
ACCESSION   XR_011778908
VERSION     XR_011778908.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..304
                     /gene="LOC139904606"
                     /note="uncharacterized LOC139904606; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904606"
     ncRNA           1..304
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904606"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139904606"
ORIGIN      
        1 aaaaaaaaaa aaaaactgca tcggaagcac tctaggcttc gtaaatcgaa gttctaacaa
       61 ctctacaaac aatctacaaa taatcaagta cagagattag gtcatgagtg cggaagcggg
      121 aaactcaaaa agcaaacaaa atgttgcagg tattgactcg gaaaaaggca ctgatcaaaa
      181 gaaaaagaaa cgtgcatcat gtgttgaagt tgatgagaat gtaactttaa aaagcagagg
      241 gagcagtaag aagaaaacta gttctggaaa gtaaggaaat gtaaggtcgg actagagagt
      301 tttt
//
LOCUS       XR_011778909             297 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904606), transcript variant X2, ncRNA.
ACCESSION   XR_011778909
VERSION     XR_011778909.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..297
                     /gene="LOC139904606"
                     /note="uncharacterized LOC139904606; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904606"
     ncRNA           1..297
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904606"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139904606"
ORIGIN      
        1 aaaaaaaaaa aaactgcatc ggaagcactc taggcttcgt aaatcgaagt tctaacaact
       61 ctacaaacaa tctacaaata atcaagagat taggtcatga gtgcggaagc gggaaactca
      121 aaaagcaaac aaaatgttgc aggtattgac tcggaaaaag gcactgatca aaagaaaaag
      181 aaacgtgcat catgtgttga agttgatgag aatgtaactt taaaaagcag agggagcagt
      241 aagaagaaaa ctagttctgg aaagtaagga aatgtaaggt cggactagag agttttt
//
LOCUS       XR_011778910             416 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904607), ncRNA.
ACCESSION   XR_011778910
VERSION     XR_011778910.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..416
                     /gene="LOC139904607"
                     /note="uncharacterized LOC139904607; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904607"
     ncRNA           1..416
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904607"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904607"
ORIGIN      
        1 tcatggtttt attcttctcc ttccctttct ttgtttcaat cgatacacac acatacacat
       61 acatgagccc tactttctaa aattgtgaag atgatgatga aatagctagc ttgaaattgt
      121 ggtttcttcc tccctccttt ctctcttttc tgccacgaca tagccatcac caccattgaa
      181 aaacctagct ttttattgat aaagatggtg ttgaaattga aagcttaatt catgttttct
      241 tgcttctcta acaaggtggt acaaacaagg agaagacccg gtgatattag actaccgagt
      301 ttagctggtg gtcggtttag gtactgctag gattggattt gggctgaaga cgtgtttgac
      361 tcgaggtact ctgatgtgtc ttattttaaa atgaaactgt attttatata atccgg
//
LOCUS       XM_071886534             883 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904608), mRNA.
ACCESSION   XM_071886534
VERSION     XM_071886534.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..883
                     /gene="LOC139904608"
                     /note="uncharacterized LOC139904608; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904608"
     CDS             67..849
                     /gene="LOC139904608"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742635.1"
                     /db_xref="GeneID:139904608"
                     /translation="MSHLSQTHKNSPSIKFFNLTTTYSIHEEIVFNHRIGTDYIQEVH
                     EINEEMEEVAEETFQVMEVDVDEDEFRTQDLDEIEPRRWAKSESSVTADSSNLETTLN
                     LKDGLSRKLEDQSELEVNDGEIKASVVISADARDESETLISLLTESVSTIILVGLSTM
                     IMVVSAIFYMNKIKPDAKTAHIRAASCSSETSSVQKGYRKKSDNNNNKRESMASSSDF
                     SMGSPSYGSFTTIERTPIKGDEVMLTPVRRSSRLLKNQVISS"
ORIGIN      
        1 gttgatgatt ttgttgaaac tgtgaaacta tggtcaatcg atttggtttc atacctctct
       61 aatcaaatgt cccatctttc tcaaacccat aagaatagcc cttccataaa attctttaac
      121 ttgactacca cttattccat acacgaagaa attgtgttta atcaccgtat tgggacggat
      181 tatattcaag aagttcatga aatcaatgaa gaaatggagg aggtcgcaga agaaactttt
      241 caagtaatgg aagttgatgt ggatgaagat gaatttagga ctcaagattt ggatgaaatt
      301 gaacctcgaa gatgggcgaa aagcgagtct agtgtaacag cagattctag taatctggaa
      361 actacattga acctcaaaga tgggctttca agaaaattgg aggatcaatc agaactggag
      421 gtgaatgatg gtgaaatcaa ggccagtgtt gttatatcag cagatgcaag ggatgaatca
      481 gaaactttga tttctttgtt gaccgaatct gtcagcacaa tcattttggt tggtttatcg
      541 acaatgataa tggttgtttc agctattttc tatatgaaca aaattaagcc agatgctaaa
      601 acggcccata tccgtgctgc ttcatgttct tcagaaacaa gcagcgttca aaaaggttac
      661 aggaagaaaa gcgacaacaa caacaacaaa agagaatcaa tggcttcttc atctgatttc
      721 tcaatgggct ctccatctta tggaagcttc actacaattg aaaggacccc aattaaagga
      781 gatgaagtaa tgctgacacc agttaggaga tcaagcaggt tgcttaagaa ccaagtcatt
      841 tcttcatgat cattttcaaa tttactaggc tactagccct ttt
//
LOCUS       XM_071886535            1699 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides low-temperature-induced
            cysteine proteinase-like (LOC139904609), mRNA.
ACCESSION   XM_071886535
VERSION     XM_071886535.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1699
                     /gene="LOC139904609"
                     /note="low-temperature-induced cysteine proteinase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 52 Proteins"
                     /db_xref="GeneID:139904609"
     CDS             41..1426
                     /gene="LOC139904609"
                     /codon_start=1
                     /product="low-temperature-induced cysteine
                     proteinase-like"
                     /protein_id="XP_071742636.1"
                     /db_xref="GeneID:139904609"
                     /translation="MKSIVVVFALFVVSSALDMSIINYDETHMNIFDSSLRTDEAVNA
                     MYESWLIKHGKFYNAIGEKETRFQIFKDNLKYIDSHNAGDQSYKLGLNKFADLTVDEY
                     RLTYTGVAKKGDRSSRLNGTKSHRYSVKSGDVLPDSVDWRTKGAVAPVKDQGSCGSCW
                     AFSTIGSVEGVNQIVTGELITLSEQELVDCDTSYNEGCNGGDMDYAFQFIVKNGGIDS
                     DADYPYISGNGKDGKCDNARKNAKVVSIDSYEDVPVNNEAALQNAAANQPITVAIEAS
                     SRDFQFYTSGVFSGSCGTNLDHGVVVVGYGTESGKDYWIVRNSWGAEWGEQGYIRMER
                     NIQDKKGKCGIAMEASYPIKSGLNPPNPGPSPPTPVTPEIVCDSYFTCPQSTTCCCVY
                     EYRGSCFSWGCCPLEGASCCNDHYSCCPHDYPVCNVRRGTCSKGNNSPLEINALKRIL
                     ATPTNAKRLGA"
     misc_feature    176..343
                     /gene="LOC139904609"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     Region: Inhibitor_I29; smart00848"
                     /db_xref="CDD:214853"
     misc_feature    443..1099
                     /gene="LOC139904609"
                     /note="Papain family cysteine protease; Region:
                     Peptidase_C1; pfam00112"
                     /db_xref="CDD:425470"
     misc_feature    order(497..499,515..517,932..934,992..994)
                     /gene="LOC139904609"
                     /note="active site"
                     /db_xref="CDD:239068"
     misc_feature    order(644..649,854..856,926..928,935..937,1082..1084)
                     /gene="LOC139904609"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     misc_feature    1169..1339
                     /gene="LOC139904609"
                     /note="Granulin; Region: GRAN; smart00277"
                     /db_xref="CDD:197621"
     polyA_site      1699
                     /gene="LOC139904609"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcctcattc caattctccc gatttcttca attcacaacc atgaaatcaa tcgttgttgt
       61 tttcgcttta ttcgtcgttt catctgctct cgatatgtca atcatcaact acgatgaaac
      121 acacatgaac atattcgatt catccttacg tactgatgaa gcggtcaacg caatgtatga
      181 atcatggttg attaaacatg gtaaatttta taatgctata ggtgagaagg aaactaggtt
      241 tcaaatattc aaagataatt tgaagtatat tgattcacat aacgctggtg atcaatcgta
      301 taaacttgga ctcaataagt ttgccgatct tacggttgat gagtaccggt tgacgtacac
      361 cggtgttgct aaaaaaggtg atcggagttc gaggttgaat ggtactaaaa gtcatcggta
      421 ttctgttaaa tccggtgacg ttttgccgga ttccgttgac tggaggacca aaggtgctgt
      481 tgctcctgtt aaagatcaag gaagctgtgg gagttgttgg gcattctcaa cgatcggatc
      541 agtagaaggt gtaaaccaga tcgtaacagg tgaactgatc acactatcag aacaagaact
      601 tgtcgattgt gatacatctt acaacgaggg atgcaatgga ggtgacatgg attacgcttt
      661 ccaattcatc gtcaaaaatg gcggtattga ctcagatgct gattatcctt atatttccgg
      721 taacggaaaa gatggaaagt gtgacaatgc caggaaaaac gccaaagttg tttctataga
      781 tagttatgaa gatgttcctg ttaacaacga agctgcattg caaaatgctg ctgcaaacca
      841 gcctattaca gtcgccattg aagccagtag ccgagatttc cagttctaca cctcgggtgt
      901 attcagcggt tcatgtggga ctaatctgga ccatggtgta gttgtggttg ggtacgggac
      961 tgaatccggc aaggattact ggatcgtacg aaactcatgg ggtgcggaat ggggtgaaca
     1021 agggtacatt agaatggaaa gaaatattca agataagaag ggtaaatgtg gtattgcaat
     1081 ggaagcatct tacccaatca agagcggttt gaacccacct aaccctggtc catcacctcc
     1141 gactccagtt acacctgaaa tcgtctgtga ttcgtacttc acttgccctc aaagtactac
     1201 ctgttgttgt gtctatgaat accgtggctc gtgcttttca tggggctgct gcccattgga
     1261 aggtgcttcg tgctgtaacg atcactacag ttgctgccca catgattacc ccgtatgcaa
     1321 cgttcgtcgt gggacctgct ccaagggaaa caacagtcca ttggaaatta atgcgctaaa
     1381 gcgtattcta gctacaccaa ctaacgcaaa gaggctcggt gcttaagaag tgattatagt
     1441 ggcaaacgag ataatagaac acaggcatca acgtggtggt tatactttcg ttgaagaagt
     1501 gattatctaa tttgaattat tgaagttata attataattg agacaatttg attattatct
     1561 gatggtaaca agctgcctat cagactgatt tgtaaatact gcattaattc ctgtactgaa
     1621 ttctaaattt gaacaagaga catgttcatg tttctatttg tattttcttt catcttgaat
     1681 aaatcttcca tttacaact
//
LOCUS       XR_011778911             476 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904610), ncRNA.
ACCESSION   XR_011778911
VERSION     XR_011778911.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..476
                     /gene="LOC139904610"
                     /note="uncharacterized LOC139904610; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904610"
     ncRNA           1..476
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904610"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904610"
ORIGIN      
        1 agaaagagat gactaggtca actagtcaac tctttcctct ccattcattt tatcacctcc
       61 caaataatac ttcacccttt ttctctcaaa accctcaaac cttcaatcat catccaaatt
      121 cgttcaagaa ggattcgatc aaaacaaatt gcatatttga actcctcgtg atctcctctt
      181 cgtttccata ccgatttcat caattttggg tcaagactag cattgttctt tgcacacatt
      241 tacttgtcga agtactttac tactcgtaca ctcaaggtcc ttgaacgata catgatacat
      301 gcttccgctc attatttgat acttgcattg gatgtcgagt atatgtgcat ttcatggagc
      361 gtcttttgac tttactttaa accatgtcgc ctagatttca ttcgtattat aacgttgtaa
      421 cttaactatt ggttgaacaa ttcttgtaaa ctttgggaac aatctttatt atgaaa
//
LOCUS       XM_071886537            2432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein 2-like (LOC139904611), mRNA.
ACCESSION   XM_071886537
VERSION     XM_071886537.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2432
                     /gene="LOC139904611"
                     /note="polyadenylate-binding protein 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins"
                     /db_xref="GeneID:139904611"
     CDS             186..2201
                     /gene="LOC139904611"
                     /codon_start=1
                     /product="polyadenylate-binding protein 2-like"
                     /protein_id="XP_071742638.1"
                     /db_xref="GeneID:139904611"
                     /translation="MAQIQIQPPTVSGAAAVVAAATATASGVAGAAVVAAAAGGNQPF
                     STTSLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSSPNDAA
                     RAIDVLNFTAVNGKAIRICYSIRDPSIRKSGTGNIFIKNLDKSIDNKALHDTFSSFGN
                     ILSCKIVTDGTGQSKGYGFVQFETEEASQNAIDKLNGMLINDKQVYVGHFLRKQERDS
                     SLSRTKFNNVYVKNLSDSITDDDLKRTFGEYGTITSAVVMKDGDGKSKGFGFVNFEGP
                     DDAANAVEALNGKKIDDKEWYVGKAQKKSERELELKSRFEQTAKETVNKFQGVNLYVK
                     NLDDTIDDDKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSSSEEASRALSEMNGK
                     MIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPSMMAPRMPMYPPGAPGMGQPLF
                     YGQAPHTMLPPQAGFGYQQQLIPGMRPGGSPMQNYFVPVVQQGQQGQRINGRRGAGPV
                     QQNQQPIPMMQQQMVPRARMYRYPVRNDANMGGVGGGGGGMLPVPYDMGSMLPRDTAA
                     AAMQQPMPITALASALANAPPDQQRTMLGENLYPLVDQLEHEHAAKVTGMLLEMDQTE
                     VLHLLESPDALKGKVAEAMEVLRNVQQANNSPSAQLTSLSLNENLVA"
     misc_feature    327..2126
                     /gene="LOC139904611"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; Region: PABP-1234; TIGR01628"
                     /db_xref="CDD:130689"
     polyA_site      2432
                     /gene="LOC139904611"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctgccctcc aaaaaaatat aaaaattctc actctctgat ctatacttac acattagaca
       61 tttatctata tctatcgata catttatttt ttatttattt aattttcgcc atttcctgaa
      121 aaagcctaaa aaattctcag aattagatac taatttaatt caatttattt ataaatagag
      181 aaaaaatggc gcagattcag atacaaccgc cgacagtatc tggtgcagca gcggtggttg
      241 cggcagcgac ggccactgcg agtggtgtgg ctggtgcagc ggtggttgcg gcggcggctg
      301 gtggaaatca gccgttttca acgacgtcgc tttacgttgg agaccttgaa tttaatgtta
      361 ctgattcgca attgtatgat ttgtttaatc aagttggaca ggtcgtgtca gttagggttt
      421 gtagggattt gagcactcgc agatcgcttg gttatggtta tgttaattac agtagcccta
      481 atgatgctgc aagagctatt gatgtgctga attttactgc ggttaatgga aaggccattc
      541 gcatctgtta ttctatcagg gacccgagca ttcgtaaaag tggaactggg aatatattca
      601 ttaagaactt ggataagtca attgacaaca aagcattgca tgacacattt tctagctttg
      661 gtaatatctt atcttgcaag attgtgactg atggtactgg tcaatcgaaa gggtatggct
      721 ttgtgcagtt tgaaaccgaa gaagcttctc aaaatgcaat tgataaacta aatggtatgt
      781 tgatcaacga caaacaagtg tacgttggtc attttcttcg taagcaagaa cgggactcat
      841 ctttaagcag aacaaagttc aataacgtgt atgtgaaaaa cctttctgac tccattactg
      901 acgatgattt gaaaagaaca tttggtgaat acggaacaat cacaagtgct gttgttatga
      961 aagatggaga tgggaaatcg aaaggttttg gatttgttaa ttttgagggt cctgatgatg
     1021 ctgctaacgc tgttgaggcg ttaaatggaa agaagattga tgataaggag tggtacgttg
     1081 ggaaggctca gaagaagtcc gaaagagagc ttgaacttaa gagtcgattt gagcagactg
     1141 caaaagaaac tgttaacaag tttcaaggtg ttaatttgta tgtcaagaac ttggatgaca
     1201 ctatcgatga tgataagctt aaggaactct tttctgagta tggtaccatc acttcgtgca
     1261 aggttatgcg cgatccaagt ggaatcagta gaggttccgg atttgttgca ttttcgtctt
     1321 ctgaggaggc ttctcgagct ctttctgaga tgaacgggaa gatgatagtg agcaaacccc
     1381 tgtatgtcgc acttgcacaa cgtaaggaag agaggagggc aaggttgcag gcacagtttt
     1441 cacaaatgag gccagttgca atggcacctt caatgatggc tcctcgtatg ccaatgtatc
     1501 ctcctggtgc tccaggtatg ggccagcctc tattctatgg tcaagctccc catactatgc
     1561 ttcctccaca ggctggattt ggttaccagc agcagctgat acctggtatg aggccaggtg
     1621 ggagtcccat gcaaaactac tttgtaccag ttgtacaaca aggccagcag ggtcaacgca
     1681 ttaatgggag acgtggagca ggtcccgtgc aacaaaatca gcagcccatt ccaatgatgc
     1741 agcagcagat ggttccaaga gcacgcatgt accgttatcc tgttaggaat gatgcaaata
     1801 tgggaggtgt tggtggagga ggaggaggga tgcttcctgt gccctacgac atgggtagca
     1861 tgcttccacg agatactgct gctgctgcta tgcaacagcc aatgcctatt acagcattgg
     1921 cttctgcact tgctaatgca ccacctgatc agcagaggac gatgctgggt gagaatcttt
     1981 acccattggt tgatcagctg gagcatgaac atgcggctaa ggtgacaggt atgcttcttg
     2041 agatggacca gacagaggta ttgcacttgc tcgagtctcc agatgcgttg aagggaaagg
     2101 ttgcagaggc tatggaagtt cttcgtaatg tccagcaagc caacaacagc ccatctgccc
     2161 agctcacttc actatcgtta aacgaaaacc tagttgcttg agtgttttct tggtcaaaga
     2221 tgatgattgt ctaggctcta gaggatgatg tttgtttggt ttttgataga attaaagcag
     2281 tagatgtcta gatgatgagg ttaattttca ttttatttgt ttggagtatt tttgaagttt
     2341 ataaacatca ttaggatgcc ttggttctta tgggttgtgg tattgctttt tgatgtctgg
     2401 ttttgttcta attcaggcgt tggtctttgc ta
//
LOCUS       XM_071886538            2192 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable E3
            ubiquitin-protein ligase RHG1A (LOC139904612), transcript variant
            X1, mRNA.
ACCESSION   XM_071886538
VERSION     XM_071886538.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2192
                     /gene="LOC139904612"
                     /note="probable E3 ubiquitin-protein ligase RHG1A; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904612"
     CDS             159..1892
                     /gene="LOC139904612"
                     /codon_start=1
                     /product="probable E3 ubiquitin-protein ligase RHG1A"
                     /protein_id="XP_071742639.1"
                     /db_xref="GeneID:139904612"
                     /translation="MQGQRGAIGSFQETLTFEHGSTSTDAVDQQIRWENNLENSPSNQ
                     LLDYISLDSPEQEDQNENIWNVGEPSSSAGPSQPDHEWPSMMKNCPEPTSSVLSLGDH
                     GSSSSQSFSDPFGPSSDPFDLDDHQRLSRKRKAVELSIGQSSSGVGSSSGSSSWHTVS
                     ENGPFDPTIPRLGLSVNAAPSENHQENVHRNVNSRILSSHQRVADLLPANNNNREREL
                     DISGPYTSLRLNLRGESSTSHQDQPVLRIPRRNFQSTSRWTRSSLRAVRSSNLVISED
                     RNELDSISDHPLFAAPSNTQNDVQNELNWTPPAANTTDGVTNGGGATSRSGTRSGVSS
                     HYHPRRLSAYLRRTLSSAADSETGEGQTDDILPRIPQIFGTSSSSSSSQDISVPPAIG
                     IQGHHHQSHSRSSLLLGRHLDGALRFPHLSRSATPGNEGRGRLVSEIRNVLDLMRRGE
                     PMRFEDLMLLDQSVFYGIADIHDRHRDMRLDIDNMSYEELLALEERIGNVNTGLTEET
                     ILKHLKLKQYVPEIDRAAEPCCICQEEYKDGDDLGTLECGHDFHCSCVKQWLQHKNSC
                     PICKSTGFANT"
     misc_feature    <1569..1883
                     /gene="LOC139904612"
                     /note="N1R/p28-like protein; Provisional; Region:
                     PHA02929"
                     /db_xref="CDD:222944"
     misc_feature    1737..1874
                     /gene="LOC139904612"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(1743..1745,1752..1754,1797..1799,1803..1805,
                     1812..1814,1821..1823,1854..1856,1863..1865)
                     /gene="LOC139904612"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438475"
     polyA_site      2192
                     /gene="LOC139904612"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acacaataca cacccacaaa caacacaaca caacacaaca caaacccaca caatttcttt
       61 catccttctt tcattctctc caaccctttc cttttgttgg ttctttcaat ctatcctcaa
      121 aaaaccccta tttacaaaaa ggcttgctga ttgatccaat gcaagggcag aggggtgcga
      181 ttggttcgtt tcaagaaacg ttaacctttg aacacggttc aacgtcaact gatgcagttg
      241 atcagcaaat tcgctgggaa aacaacttgg aaaactcacc atcaaatcag ctactcgatt
      301 atatatcttt agactcaccc gaacaagaag atcaaaatga aaatatatgg aatgtaggtg
      361 aacctagttc aagtgctggc ccgagtcaac cggaccatga gtggccttca atgatgaaaa
      421 attgtcccga accaacttca agtgtgcttt ctttgggcga tcatggttcg tctagttcgc
      481 aatcgttttc tgacccgttt ggcccgtctt ctgacccgtt tgacttagat gaccaccagc
      541 gtttatctcg taagcgaaaa gcagttgaat taagcattgg gcagtcttct tcgggtgttg
      601 gaagttcgag tggttcaagc tcatggcaca cggtatccga aaacggcccg tttgacccaa
      661 cgatcccacg tctcggattg agtgtaaacg ctgccccgtc cgaaaatcat caagaaaacg
      721 ttcatcgaaa cgtgaattcg aggatccttt cgtctcatca acgagtagca gatttgttac
      781 cggcgaataa taacaatcgg gaacgggaat tggatatttc gggcccgtat acctcgttaa
      841 gacttaacct aagaggcgag agttcgacaa gtcatcagga ccaacccgtt ttacgaattc
      901 cgagaagaaa ttttcaatcc acttcaagat ggactcgaag ttcattaagg gccgtacgct
      961 cttcaaatct tgtaatttca gaagatagga atgaactcga ctcgatatct gatcatccgc
     1021 tatttgcagc tccaagtaac acacaaaacg atgtccaaaa cgaactcaac tggaccccac
     1081 cagcggcaaa caccaccgac ggtgtaacta atggtggtgg ggccacttct cgaagtggga
     1141 ccaggtccgg ggtgtcttca cattatcatc ctagaagatt atcggcgtat cttcgtagga
     1201 ctttatcgtc tgctgctgat tcggagacgg gtgaagggca aacggacgat attttaccga
     1261 gaatcccgca aattttcggt acttcatcat cttcatcttc ttcacaagat atttcggttc
     1321 cgcctgcaat tggcattcaa ggtcatcatc atcaatcgca ctcgaggtct tcattgttgc
     1381 ttggtagaca ccttgatggt gctttaagat tccctcatct ttcacggtca gctacacctg
     1441 gaaacgaagg aagagggcgg ctagtttccg agattcgcaa tgtgctggat cttatgcgga
     1501 ggggtgaacc catgcggttt gaggatctta tgctgttaga tcaatcggtc ttctatggga
     1561 tagcggatat tcacgatagg catagagata tgcgtcttga tattgataat atgtcatacg
     1621 aggagctact ggcattggag gaacgcattg gaaacgtgaa cactggatta accgaagaaa
     1681 caattttgaa gcatcttaag ctgaaacagt atgtgcccga aatagatcga gctgcagaac
     1741 cttgctgcat atgtcaggag gaatacaagg atggagatga tctcgggaca ttagagtgcg
     1801 ggcatgactt ccattgcagt tgcgtcaaac aatggttgca acacaagaac tcatgcccga
     1861 tttgtaagtc aacagggttt gccaatacat gagccacaaa aaggatagca tgaagattgt
     1921 gaatcatctc ttatatatca caagtataag aggcggtgtc tttggataaa ttgttggcaa
     1981 gtaatattct ttgcctattt accatttaaa ttttaaaaag tcaacttatg tttttttttt
     2041 ggtttccttt ttatgatgaa ccaaaggcat aacttatgtc atttttctat ttatttatga
     2101 tcatcaagaa gttcaaaatg ttgtagttct ttaaaatttt ggtaatctga agtttataac
     2161 ggttaatatg tctagttctc taattatatg ct
//
LOCUS       XM_071886539            2280 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable E3
            ubiquitin-protein ligase RHG1A (LOC139904612), transcript variant
            X2, mRNA.
ACCESSION   XM_071886539
VERSION     XM_071886539.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2280
                     /gene="LOC139904612"
                     /note="probable E3 ubiquitin-protein ligase RHG1A; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139904612"
     CDS             247..1980
                     /gene="LOC139904612"
                     /codon_start=1
                     /product="probable E3 ubiquitin-protein ligase RHG1A"
                     /protein_id="XP_071742640.1"
                     /db_xref="GeneID:139904612"
                     /translation="MQGQRGAIGSFQETLTFEHGSTSTDAVDQQIRWENNLENSPSNQ
                     LLDYISLDSPEQEDQNENIWNVGEPSSSAGPSQPDHEWPSMMKNCPEPTSSVLSLGDH
                     GSSSSQSFSDPFGPSSDPFDLDDHQRLSRKRKAVELSIGQSSSGVGSSSGSSSWHTVS
                     ENGPFDPTIPRLGLSVNAAPSENHQENVHRNVNSRILSSHQRVADLLPANNNNREREL
                     DISGPYTSLRLNLRGESSTSHQDQPVLRIPRRNFQSTSRWTRSSLRAVRSSNLVISED
                     RNELDSISDHPLFAAPSNTQNDVQNELNWTPPAANTTDGVTNGGGATSRSGTRSGVSS
                     HYHPRRLSAYLRRTLSSAADSETGEGQTDDILPRIPQIFGTSSSSSSSQDISVPPAIG
                     IQGHHHQSHSRSSLLLGRHLDGALRFPHLSRSATPGNEGRGRLVSEIRNVLDLMRRGE
                     PMRFEDLMLLDQSVFYGIADIHDRHRDMRLDIDNMSYEELLALEERIGNVNTGLTEET
                     ILKHLKLKQYVPEIDRAAEPCCICQEEYKDGDDLGTLECGHDFHCSCVKQWLQHKNSC
                     PICKSTGFANT"
     misc_feature    <1657..1971
                     /gene="LOC139904612"
                     /note="N1R/p28-like protein; Provisional; Region:
                     PHA02929"
                     /db_xref="CDD:222944"
     misc_feature    1825..1962
                     /gene="LOC139904612"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(1831..1833,1840..1842,1885..1887,1891..1893,
                     1900..1902,1909..1911,1942..1944,1951..1953)
                     /gene="LOC139904612"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438475"
     polyA_site      2280
                     /gene="LOC139904612"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acacccacaa acaacacaac acaacacaac acaaacccac acaatttctt tcatccttct
       61 ttcattctct ccaacccttt ccttttgttg gttctttcaa tctatcctca aaaaacccct
      121 atttacaaaa agggtatcag tttgatcatc atctttgtaa ctgtttcaaa ttcttgataa
      181 tatttagatc catcatctat acaatcattt ttcctttttt tgtgtgtttg cttgctgatt
      241 gatccaatgc aagggcagag gggtgcgatt ggttcgtttc aagaaacgtt aacctttgaa
      301 cacggttcaa cgtcaactga tgcagttgat cagcaaattc gctgggaaaa caacttggaa
      361 aactcaccat caaatcagct actcgattat atatctttag actcacccga acaagaagat
      421 caaaatgaaa atatatggaa tgtaggtgaa cctagttcaa gtgctggccc gagtcaaccg
      481 gaccatgagt ggccttcaat gatgaaaaat tgtcccgaac caacttcaag tgtgctttct
      541 ttgggcgatc atggttcgtc tagttcgcaa tcgttttctg acccgtttgg cccgtcttct
      601 gacccgtttg acttagatga ccaccagcgt ttatctcgta agcgaaaagc agttgaatta
      661 agcattgggc agtcttcttc gggtgttgga agttcgagtg gttcaagctc atggcacacg
      721 gtatccgaaa acggcccgtt tgacccaacg atcccacgtc tcggattgag tgtaaacgct
      781 gccccgtccg aaaatcatca agaaaacgtt catcgaaacg tgaattcgag gatcctttcg
      841 tctcatcaac gagtagcaga tttgttaccg gcgaataata acaatcggga acgggaattg
      901 gatatttcgg gcccgtatac ctcgttaaga cttaacctaa gaggcgagag ttcgacaagt
      961 catcaggacc aacccgtttt acgaattccg agaagaaatt ttcaatccac ttcaagatgg
     1021 actcgaagtt cattaagggc cgtacgctct tcaaatcttg taatttcaga agataggaat
     1081 gaactcgact cgatatctga tcatccgcta tttgcagctc caagtaacac acaaaacgat
     1141 gtccaaaacg aactcaactg gaccccacca gcggcaaaca ccaccgacgg tgtaactaat
     1201 ggtggtgggg ccacttctcg aagtgggacc aggtccgggg tgtcttcaca ttatcatcct
     1261 agaagattat cggcgtatct tcgtaggact ttatcgtctg ctgctgattc ggagacgggt
     1321 gaagggcaaa cggacgatat tttaccgaga atcccgcaaa ttttcggtac ttcatcatct
     1381 tcatcttctt cacaagatat ttcggttccg cctgcaattg gcattcaagg tcatcatcat
     1441 caatcgcact cgaggtcttc attgttgctt ggtagacacc ttgatggtgc tttaagattc
     1501 cctcatcttt cacggtcagc tacacctgga aacgaaggaa gagggcggct agtttccgag
     1561 attcgcaatg tgctggatct tatgcggagg ggtgaaccca tgcggtttga ggatcttatg
     1621 ctgttagatc aatcggtctt ctatgggata gcggatattc acgataggca tagagatatg
     1681 cgtcttgata ttgataatat gtcatacgag gagctactgg cattggagga acgcattgga
     1741 aacgtgaaca ctggattaac cgaagaaaca attttgaagc atcttaagct gaaacagtat
     1801 gtgcccgaaa tagatcgagc tgcagaacct tgctgcatat gtcaggagga atacaaggat
     1861 ggagatgatc tcgggacatt agagtgcggg catgacttcc attgcagttg cgtcaaacaa
     1921 tggttgcaac acaagaactc atgcccgatt tgtaagtcaa cagggtttgc caatacatga
     1981 gccacaaaaa ggatagcatg aagattgtga atcatctctt atatatcaca agtataagag
     2041 gcggtgtctt tggataaatt gttggcaagt aatattcttt gcctatttac catttaaatt
     2101 ttaaaaagtc aacttatgtt ttttttttgg tttccttttt atgatgaacc aaaggcataa
     2161 cttatgtcat ttttctattt atttatgatc atcaagaagt tcaaaatgtt gtagttcttt
     2221 aaaattttgg taatctgaag tttataacgg ttaatatgtc tagttctcta attatatgct
//
LOCUS       XM_071886540            1806 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase At1g01540 (LOC139904613), mRNA.
ACCESSION   XM_071886540
VERSION     XM_071886540.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1806
                     /gene="LOC139904613"
                     /note="probable serine/threonine-protein kinase At1g01540;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 71 Proteins"
                     /db_xref="GeneID:139904613"
     CDS             148..1626
                     /gene="LOC139904613"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase
                     At1g01540"
                     /protein_id="XP_071742641.1"
                     /db_xref="GeneID:139904613"
                     /translation="MSGFLNDETSIFGLRLWAVVGICVGATIVILMFLISLYFTSKNK
                     NFCKKSETLPQKQKPIIPNISKEIREIRVNPTRPDNQETESKQQNPGQDSDFLVEDEK
                     DVNGYQNIQIELGKKHRISYPERTGSGHKNGSGDQLSIVGSVQPEVSHLGWGHWYTLR
                     ELEIATNGFADENVIGEGGYGIVYSGILEDNSTVAVKNLLNNRGQAEREFKVEVEAIG
                     RVRHKNLVRLLGYCVEGAHRILVYEYADNGNLEQWLHGDVGPTSPLTWEIRMNIILGT
                     AKGLTYLHEGLEPKVVHRDIKASNILLDRQWNSKVSDFGLAKLLGSDMSYVTTRVMGT
                     FGYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRPQGEVNLVDWLKTMVTN
                     RNAEGVLDPKLPEKPSSRALKRVLLVALRCVDPTAQKRPKMGHVIHMLEADDFSFQSD
                     RRGSRETVRERSFEKRQIESGDSSGYESSIQTNKTEWRRQEH"
     misc_feature    670..1470
                     /gene="LOC139904613"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(670..684,694..696,730..732,736..738,823..825,
                     871..882,892..894,898..900,1030..1032,1036..1038,
                     1042..1047,1051..1053,1084..1086,1093..1095,1144..1155)
                     /gene="LOC139904613"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(670..684,694..696,730..732,736..738,823..825,
                     871..882,892..894,1030..1032,1036..1038,1042..1047,
                     1051..1053,1084..1086)
                     /gene="LOC139904613"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(682..684,892..894,898..900,1030..1032,1036..1038,
                     1042..1044,1093..1095,1144..1155)
                     /gene="LOC139904613"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1081..1104,1132..1155)
                     /gene="LOC139904613"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     polyA_site      1806
                     /gene="LOC139904613"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaatcccca cttaattttc taaccattta ataccaccat tacattaccc ttcttttttg
       61 tctctcttct tcatttcata ttttcctaat tgtccttttt gtcatgtggc atcatcgtac
      121 taataattaa cagcaacaag aacaaatatg tctggttttc ttaatgatga aacctcaata
      181 tttggtttaa ggttatgggc tgttgttggt atttgtgttg gtgccaccat tgttatcttg
      241 atgttcttaa tttcacttta tttcacttcc aagaacaaaa atttttgcaa aaaaagcgaa
      301 actttacctc aaaagcaaaa acccatcatc ccaaatatct ctaaagaaat ccgtgagatc
      361 cgggtcaacc cgacccggcc tgataatcaa gaaaccgagt caaaacaaca aaacccgggt
      421 caagattccg actttttagt tgaagatgaa aaagatgtaa atgggtatca aaacattcag
      481 attgaattgg gtaaaaagca ccggatttcg tatccggaga gaactggttc gggtcacaaa
      541 aatgggtcgg gtgatcaatt gagtattgtt ggttctgttc aacctgaggt ttcccatctg
      601 ggttggggtc attggtatac acttagagag cttgagattg caacaaatgg ttttgctgat
      661 gaaaatgtga ttggtgaagg tggttatggg attgtttata gtgggatttt ggaagataac
      721 tctactgttg ctgttaagaa tttgcttaat aacagaggac aagctgaaag ggagtttaag
      781 gtagaagtag aagcaattgg gcgtgtacgg cataagaatt tagtcaggtt acttggttat
      841 tgtgtggaag gagctcatag gatcctagtt tatgagtacg cagacaacgg aaacttagaa
      901 caatggcttc atggagatgt aggacccacc agccctctta catgggagat tcgaatgaac
      961 attatactcg gaactgccaa agggttgacg tatttgcacg aaggactcga gcccaaagta
     1021 gttcaccgtg atattaaggc aagcaacata ttacttgata ggcaatggaa ctcgaaagtt
     1081 tcggattttg gtttggcaaa gctcctgggg tcagatatga gttatgtaac gacccgggtc
     1141 atgggaacat ttgggtatgt tgctccagag tatgctagta ctggtatgtt gaacgaacga
     1201 agcgacgtat acagttttgg gattttaatt atggagataa ttagtggtag aaaccctgta
     1261 gattatagcc ggcctcaagg agaggtaaac cttgttgatt ggcttaaaac aatggtaaca
     1321 aataggaacg ctgagggcgt tttggatcct aaattacctg aaaaaccttc ttcaagagca
     1381 ttgaaacgag tccttttagt agcattacga tgtgtggatc caactgctca aaaaaggccg
     1441 aagatgggtc atgtgattca catgctcgag gccgacgatt tttcctttca aagtgatcga
     1501 agaggaagtc gggaaacagt aagggagagg tcatttgaga aacgacaaat tgagtcagga
     1561 gatagtagtg gatatgaaag tagcatccaa acaaacaaaa cagaatggag aagacaagaa
     1621 cactagtagg aatgtagttc atcgaaagct gatatttgtg tatattgttg tctcgattca
     1681 tcccatttat gtaagtttac acgttcacga ctgatcgttg tatattcctt tcaatcttgt
     1741 tggtttcaaa ttgtttcact ttataacact tgtttatttt tagtcagtaa cgagctttta
     1801 aatata
//
LOCUS       XM_071886541            1311 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gamma conglutin 1-like
            (LOC139904614), mRNA.
ACCESSION   XM_071886541
VERSION     XM_071886541.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1311
                     /gene="LOC139904614"
                     /note="gamma conglutin 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904614"
     CDS             1..1311
                     /gene="LOC139904614"
                     /codon_start=1
                     /product="gamma conglutin 1-like"
                     /protein_id="XP_071742642.1"
                     /db_xref="GeneID:139904614"
                     /translation="MGFQRQLVLFIMAFMNFSYEHKAIAQWPPYNSIVSQVTKHTDPT
                     NNKPLYSVEIMTKYFWGDFIHTNFLIDIDTPFIWYDCILNYDSNPTENYTCPSKTVCA
                     DPVSCGEPECRDIQTSSSYKQYSSSCPPATNSLTLPGWSGCTCPVSIVDPINGSCGEG
                     LLGISELYFEVPFFEGLFPNTLCAPSSTFDLFPANVSGVMGLSTSAYALPSHSVTNGV
                     FPRAFSLCLPSSVSKTGVFFLGSSSYYFSPHSKVDVTSYLSYTPLLNHSDSFGYFIGV
                     KSIVIKKRAINVPTNTTTKLSTLEPYTILRSDIYNQVVRRFLKVTRELTMAKPVAPFD
                     FCYEASTNGTKVGLKVPDIDFSLEDGKKWTVHTANSMKQVTKDVACLAFVEGGATSEH
                     GIVIGTHQMEDNFLKFDLVNWTLGFSSSLLTKGTSCASFNSVNH"
     misc_feature    199..1263
                     /gene="LOC139904614"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(211..213,217..219,223..225,442..450,595..597)
                     /gene="LOC139904614"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    211..219
                     /gene="LOC139904614"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    211..213
                     /gene="LOC139904614"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(442..453,469..480)
                     /gene="LOC139904614"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgggtttcc aacgacaatt agttcttttc attatggcct tcatgaattt ctcttatgaa
       61 cataaagcca ttgctcaatg gccaccatac aactctatag tctctcaagt tactaaacat
      121 acagatccca ctaataataa acctctttat agcgttgaga ttatgacaaa atacttttgg
      181 ggagatttta tccacacaaa cttcctcata gacatcgaca ctccgttcat ttggtacgat
      241 tgcatcctta attacgactc taatccaact gaaaattata cttgccccag taagacggtc
      301 tgtgcggacc ccgtttcttg tggtgaacct gaatgcagag acattcaaac ctcttcttct
      361 tataagcaat attcttcttc ttgtcctccc gcaacaaaca gtttgacatt acctggttgg
      421 tcaggttgca catgccctgt gagtattgtg gaccccatta atgggtcgtg tggtgaagga
      481 ctgctgggta tcagtgagtt atatttcgaa gttccttttt ttgaaggtct tttccctaat
      541 accctatgtg ctccttcttc tacatttgac ttgtttcccg ctaacgttag cggtgtaatg
      601 ggtttgtcca cctcagcata cgcattacca tcacattcag taactaatgg agtatttcca
      661 agagcctttt ctctatgttt gcctagttca gtgtctaaaa ctggggtgtt cttccttgga
      721 agcagttcat attatttttc tccacattca aaagtcgacg taaccagtta tctttcttat
      781 actccgttac taaaccattc agattctttt ggatacttca ttggtgtcaa aagcattgta
      841 attaaaaaga gagctatcaa tgttccaacg aatacaacta caaagctgag tacacttgag
      901 ccttacacca ttctcagatc cgacatttat aatcaagtgg ttcgaagatt cttaaaggtt
      961 acaagagaac tcactatggc aaagccagtc gcaccattcg acttttgtta cgaagcatca
     1021 accaatggta ctaaagttgg tttaaaagtt ccagatattg attttagtct tgaagatggg
     1081 aagaagtgga ctgtacacac tgctaactca atgaagcaag tgactaaaga cgtggcgtgc
     1141 ctagcgtttg ttgaaggtgg tgcaactagt gaacatggaa tcgtgatcgg aacacatcag
     1201 atggaagata atttcctgaa attcgattta gtaaattgga ctttggggtt cagttcatcc
     1261 ttgttgacta aaggaacttc ttgtgcaagc tttaactctg tcaaccactg a
//
LOCUS       XR_011778912             307 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904615), ncRNA.
ACCESSION   XR_011778912
VERSION     XR_011778912.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..307
                     /gene="LOC139904615"
                     /note="uncharacterized LOC139904615; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904615"
     ncRNA           1..307
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904615"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904615"
ORIGIN      
        1 cttcaactaa ggaagacgaa ttggagaaat gaattatggt tgtcggtgaa cacagattga
       61 tggaatggat ttgaggaagg taactgttac acaagttgtt gttgctcatg agttcgagca
      121 acttttctta tggattgaag ttttaagttt gtgaagatgt catccaacaa atacactaca
      181 atcaataagc cgaagggttg tttggatgct ttggatactg ccgagtaaag tataggaggt
      241 ggtgggaata agaaagataa tgcccaagtg cttcaccatt ccaaaccgtt atagaaatgg
      301 ttgccgc
//
LOCUS       XM_071886542            4893 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter C family
            member 12-like (LOC139904616), mRNA.
ACCESSION   XM_071886542
VERSION     XM_071886542.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4893
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4893
                     /gene="LOC139904616"
                     /note="ABC transporter C family member 12-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139904616"
     CDS             75..4709
                     /gene="LOC139904616"
                     /codon_start=1
                     /product="ABC transporter C family member 12-like"
                     /protein_id="XP_071742643.1"
                     /db_xref="GeneID:139904616"
                     /translation="MGVESLSWFCQPDENGIWAKMTSSALGGYTPCGIESVVVCISNM
                     VLMGLCLYRLWLIITNFRVQRFCLRSKYYNYMLALLAAYCAANPFYRLLFGVSMFDFD
                     SQTSLAPFEVVSLMIEILVWICIMIMTLLETKIYIRDFRWYVRFGVLYVLVGDTVKLS
                     IILSLKDLYPSYILHVYISSLVCQALFGIFLLAYVPNLDAYVGYMPLQTEAHDDIKYE
                     VLSGGEHICPERHANILSRIYFGWMTPLMEQGYRKPITEKDVWILDTWDRTEILSQKF
                     QDCWVEESQKSNPFLLRCLNNCVGGRFWFGGLFKVGNDLSQFVGPVILNYLLQSLQRG
                     DPSWIGYVYAFSIFVGVSLGVLCEAQYFQNVARVGFRIRSILVAAVFRKSLRLTHEAR
                     KDFQSGKITNMITTDANALQQVCNQLHGLWSAPFRIVLSMILLYQQLGVASLIGSLLL
                     VLMFPVQTMIVRKMRKLSKEGLQYTDKRVGLVTEILAAADTVKCYAWEQSFQSKIQTI
                     RKDELLWLWKAQFLGACNNFILNSLPVLVSVISFGCFTLLGGDLTPSRAFTSLSLFTV
                     LRTPLNTLPNIITQAVNAYVSLQRLEELFLADERILLPNPPLEPGLPAISIKNGNFSW
                     DPNSPKPTLTDINIDIQVGSLVAIVGGTGEGKTSLISAMLGELPPLENSSAVIRGTAA
                     YVPQISWIFNATVRENILFGSMFEASRYWKTVEVTALQHDLDILPGRDLTEIGERGVN
                     ISGGQKQRVSMARAVYSNSDVYVFDDPLSALDTHVGREVFEKCIKEELRGKTRVLVTN
                     QLHFLHQVDKIILVSEGMIKEEGTFEELSENGPLFKKLMEKVGGMDDHVDGGETRTDT
                     DYGSSKQNADEVAGGDSVNDQSIITKRKRKSHLINQEDRQTGIVSWNVLARYKDALGG
                     LWVVMILFMCYISTEVLRILSSTWLSYWTEQSNTTTPGPGFYILIYALLSLGQVLVTF
                     LNSFWLISASLHAAKTLHDTMLHSVLRAPTTFFQTNPIGRMINRFSNDLGDIDRNVAS
                     LVNNVMTQVWQLLSTFVLIGIVSTISLWAIMPLLIVFYTAYLYYQSTSREVKRLDSIT
                     RSPVYAQFGEALNGLSSIRAYKAYDRMATINGKTMDNNIRFTLINFSSNRWLTIRLET
                     LGGLMIWLTATFAVMQFSRTNDQVAFASTIGLLLSYSLNITNLMSNVLRQASRAENSF
                     NAVERVGIYIDLPSEAPSIIENNRPPPGWPTMGLVEFDNVGFRYRPGLPPVLHGLSFS
                     ISPTEKVGIVGRTGAGKSTMINALFRLVEFEKGRILIDNYDISSFGLTDLRKVLGIIA
                     QSPVLFSGTVRFNLDPFNEHSDVDLWEALERSYLKNVIIRNPFGLDAEVSEGGENFSV
                     GQRQLLSLARALLRKSKILVLDEATAAVDVRTDDLIQKTIRKEFRSCTMLIIAHRLNT
                     IIDCNRILVLENGQILEYDTPERLISREGAFLKMVESTGAANAQYLQDIVLGEDAINN
                     FKGDEPAEHNVHETFLTSSRMTGSAQFAIDMIPNSSQTGLLDLETKGGKL"
     misc_feature    75..4700
                     /gene="LOC139904616"
                     /note="ABC transporter C family member; Provisional;
                     Region: PLN03130"
                     /db_xref="CDD:215595"
ORIGIN      
        1 aagtatcaca ttccacttgc agtttagtga tttcactatt tactctgtgg gagtaaagtg
       61 tgatcataac taacatgggt gttgagtcat tgagttggtt ttgtcaacca gatgaaaacg
      121 gcatttgggc aaagatgaca tctagtgctc ttggtggtta tacaccgtgt ggcattgaat
      181 ccgttgtggt ttgtatatca aatatggttt taatgggttt gtgcttgtat agattatggc
      241 taatcataac aaactttcga gttcaacggt tctgcttacg ctcaaagtac tataactata
      301 tgctggccct tttagcagct tattgtgctg caaacccctt ctatcgatta ctttttggtg
      361 tttcaatgtt tgacttcgat tcacaaacta gccttgctcc atttgaggtg gtttcactta
      421 tgattgagat ccttgtttgg atttgtataa tgattatgac tcttctggaa acgaaaatat
      481 atattagaga ttttcgttgg tacgtccgat ttggtgttct ttatgtatta gttggggata
      541 ctgtgaaact tagtatcatt ctatcattaa aagatttata cccgagttat atactccatg
      601 tgtacatcag ttcgttggtc tgccaggctt tatttggaat atttcttctt gcttatgtac
      661 caaatttgga tgcctacgtg ggttatatgc cacttcaaac tgaagctcat gatgacatca
      721 agtatgaagt gcttagtgga ggtgaacata tttgccccga gaggcatgca aatatattat
      781 caagaattta ttttggttgg atgactcctc ttatggagca aggctaccga aaacctataa
      841 ctgaaaaaga tgtctggatc ctggacacgt gggaccggac tgagatattg agtcaaaaat
      901 tccaagattg ttgggttgaa gaatctcaaa agtcaaatcc atttcttcta cgttgtctga
      961 ataattgtgt tggtggaagg ttttggtttg gagggctttt caaagtaggc aatgatcttt
     1021 cacagttcgt aggacccgtt atactaaact atctcctaca gtcattgcaa agaggtgatc
     1081 cttcgtggat tggatacgta tacgctttct caatatttgt tggtgtgtca ttaggagttc
     1141 tctgtgaagc tcaatatttt cagaatgttg caagggtcgg gttcaggata aggtcaattt
     1201 tggtggctgc tgtatttcgg aagtccttaa ggctaaccca tgaagcccga aaggatttcc
     1261 aatctggaaa aattacaaat atgataacaa cagatgctaa tgcactccag caagtatgta
     1321 atcaacttca tgggttatgg tcagctccat tcagaattgt gctctctatg attcttcttt
     1381 atcaacaact tggggttgct tcactcatcg gttctcttct tttggttctc atgttccctg
     1441 ttcagacgat gattgtcaga aaaatgagaa aattatcgaa ggaaggttta caatacactg
     1501 acaaaagagt aggactagtg actgaaattt tggctgcagc agacactgtt aaatgttatg
     1561 catgggagca aagtttccaa tccaaaattc aaactatcag gaaagatgag cttctatggt
     1621 tatggaaagc acaatttttg ggagcctgca acaatttcat actgaacagt cttccggttc
     1681 ttgtgtcggt tatatcgttt ggttgtttca cacttcttgg tggagactta acaccttcaa
     1741 gggcttttac gtcactttcc ttatttacag tgctgcgaac tcctttaaac acacttccta
     1801 acataataac tcaggcagtg aatgcatacg tttcattaca gcgtttagag gaactatttt
     1861 tagccgatga gagaattctt ttacccaatc caccacttga accggggcta ccagcaatct
     1921 caataaaaaa cggaaacttt tcttgggatc cgaattcccc aaaaccgaca ttgaccgata
     1981 taaatataga tatacaagtt ggcagcttgg ttgcaattgt aggtggaact ggagaaggaa
     2041 agacatccct tatttcagcc atgctcggtg agcttcctcc tttagaaaat tccagtgctg
     2101 tcatcagagg aaccgctgca tatgtccctc aaatttcatg gatattcaat gctactgtac
     2161 gtgaaaacat attattcgga tcaatgtttg aagcttcaag atattggaaa accgttgaag
     2221 taactgcgtt acagcatgac cttgatatac tgccaggtcg cgacctcact gaaattggcg
     2281 aaagaggtgt gaatattagt ggcggacaaa agcaaagagt ttctatggct agagctgtgt
     2341 actcaaactc tgatgtgtat gtatttgatg acccgttgag tgctctagat actcatgttg
     2401 gtcgagaggt ttttgaaaaa tgcatcaagg aagagttgcg agggaagaca agagttcttg
     2461 ttacaaacca gttacatttt cttcatcagg tggataaaat tattttagtc tctgaaggta
     2521 tgatcaaaga agaaggaacc tttgaagagc tctcagaaaa cgggccccta tttaaaaaat
     2581 taatggaaaa ggtgggtggt atggatgatc atgtcgatgg aggtgaaacc agaaccgata
     2641 ctgactacgg atcctcgaaa caaaatgctg atgaggtggc gggtggtgat tcggtcaatg
     2701 atcaaagcat cataacaaaa aggaagcgta aatctcatct tatcaatcaa gaagatcgcc
     2761 aaactggaat tgttagttgg aatgttttag caaggtacaa ggatgcttta ggaggcctat
     2821 gggttgtcat gatcttattt atgtgctata tttcaactga agtccttcga attttgagta
     2881 gcacatggtt aagttattgg acagaacaaa gcaacacaac aactccggga cccggtttct
     2941 atattctcat ctatgccctc ttgtcacttg gacaagtact ggtaacattt ctaaattctt
     3001 tctggttgat ttcggcaagc ctacacgcag ctaaaacact tcatgataca atgctgcatt
     3061 cagttcttag agcccctaca acgttttttc aaacgaatcc aattgggcgg atgattaata
     3121 ggttctcgaa tgatcttggt gatattgatc gtaatgttgc tagtcttgtt aataatgtta
     3181 tgactcaagt ttggcaacta ctttcaactt ttgtgcttat tggaattgtg agcacaatat
     3241 ctttgtgggc cataatgccc ctccttattg tgttttacac cgcctacctt tattatcaga
     3301 gcacatcacg agaagtcaag cgtttggact ccattacaag atctccagta tacgcgcaat
     3361 ttggtgaagc gttaaacggt ttatcaagta tccgtgcata taaagcatac gatcgaatgg
     3421 ccacaattaa cgggaaaacg atggataaca atattcgatt cacccttata aacttcagtt
     3481 ctaaccgctg gttaaccata agactggaaa cattaggagg tttaatgatt tggttaactg
     3541 ctacttttgc tgttatgcaa ttttcaagaa caaatgatca agtagctttt gcatccacaa
     3601 ttggtttact cctaagttat tctcttaaca tcacaaatct tatgagtaat gttttgagac
     3661 aagcaagtag agccgaaaat agttttaacg ccgttgagag agtcgggata tatatagatt
     3721 tgccatctga ggctccttct ataatcgaga ataaccgtcc accacccggc tggcccacaa
     3781 tgggtttagt ggaatttgat aatgtagggt ttcggtatag accaggtctg cctccggttt
     3841 tgcatgggtt gtcgtttagt atttcaccaa ccgaaaaagt tggaatagtt ggaaggacgg
     3901 gtgcagggaa gtcaactatg atcaatgcgt tatttcggtt ggttgagttt gaaaaaggaa
     3961 gaatcttgat tgataattac gatatttcta gttttggatt gacggatttg cgtaaagttc
     4021 ttggtattat agcacaatca ccagttctct tttcaggtac cgtgcgtttt aatcttgatc
     4081 catttaatga acatagtgat gttgatcttt gggaggctct agaacgctca tatctaaaga
     4141 atgtgatcat cagaaacccc ttcggtttgg atgcagaggt ctccgaggga ggggagaatt
     4201 ttagtgttgg acaaagacaa ctgctgagtc ttgcaagggc actactaagg aaatcaaaga
     4261 ttcttgttct tgatgaagca actgcagctg ttgatgtcag aaccgatgat ctaattcaaa
     4321 aaacgatacg aaaagaattc agatcgtgca caatgctcat tattgctcat cgactcaaca
     4381 ccatcatcga ttgcaatcga attcttgtgc ttgaaaatgg tcaaattttg gaatatgata
     4441 ctccagaaag attaatatca cgtgaaggag cgttcttgaa gatggttgaa agcacaggag
     4501 ctgcaaatgc tcagtattta caagacattg tactcggtga agatgcaatc aacaacttta
     4561 agggagacga gcctgcggaa cataatgtac atgagacatt tctaacatca tctcgtatga
     4621 caggttcagc acaatttgct attgatatga ttccgaattc atctcaaaca ggcttgctag
     4681 acttggaaac taaaggtgga aagttgtgag taatgataac aggcataatt tgttccttta
     4741 ggtgtataga ttctcaaatc atttgagctg gaaattgtaa attttggcta ctatacaaaa
     4801 taaccaaaag tttcatccga acggattttc ccgtcaaaag tcgaaaggat tcagtaaacg
     4861 acttttccca ccaaaataag ggttacacca tgg
//
LOCUS       XM_071886543            3362 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable LRR receptor-like
            serine/threonine-protein kinase RFK1 (LOC139904618), mRNA.
ACCESSION   XM_071886543
VERSION     XM_071886543.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3362
                     /gene="LOC139904618"
                     /note="probable LRR receptor-like serine/threonine-protein
                     kinase RFK1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 67 Proteins"
                     /db_xref="GeneID:139904618"
     CDS             94..3123
                     /gene="LOC139904618"
                     /codon_start=1
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase RFK1"
                     /protein_id="XP_071742644.1"
                     /db_xref="GeneID:139904618"
                     /translation="MRNSDLMLFLVVSFTIYLRFADSVVPQQEVEAVEEIMRIMGATN
                     WRLNSNSCQLEEISVRPKPHPEADASVQCDIIDCNNDTDCHIVTITHKYYSLDGVLPP
                     GLVKLPYLRTIDFAYNYLGGTIPSELGSTQLQSISLLGNRFSGEIPAEVGNITTLTYL
                     NFEANNFSGIIPSELGRLVNLQSLILSSNRLTGMVPASLAELRNLTDFRISDNNFSGS
                     IPNFIQNWKLLNKLELIGTGLHGPIPSNISLLKNLIDLRICEINGPTQGFPLIDNANG
                     LQTVVMRNCNISGEIPAYIWRKRDLKLLDVSFNKLTGGISGDILSRSLRFVFLTNNML
                     TGDIPDSLLIEGATIDLSYNNFTLQGPDRPTCRQNMNLILNLFKSSLAGNALQDILPC
                     KRDARCPRYGCSMHVNSGGTDLTVRENNRDVLYEGDGLFDRGAGSFHSSANNNWGVSS
                     TGDFLDDNIETNIYVESLQQNSTNLPPLYTTARLSPLSLTYISYCLLNGDYLVNLHFA
                     EIQYVNDSTYKSLGRRIFNIYIQGQLVKRDFNIEDEVGIGRPLVVPFNASVVNNALEI
                     RFYWAGKGTARFPKRGRYGPLVSAISVEPYSKTCSINGKKNTVAYVGFAIMGLCLVLI
                     LLGILWWRRYSNGKKSNADDKDFEGLKLTTVSFSFKQLKTATRNFDATNKIGEGGFGP
                     VYKGTLRDGTVIAVKQLSSCSRQGNREFLNEIGVISCLQHPNLVKLHGCCIEDDQLLL
                     VYEYMENNSLASALFDSNKSGFMLDWATRFKICVGIARGLAFLHEESRLKIVHRDIKA
                     TNVLLDKDLNPKISDFGLARLDEDEKTHVSTRVAGTIGYMAPEYALWGHLSYKADVYS
                     FGVVALEIVSGKNNNKYIPNNDSVCLLDWACRLQTSKQYEELLDERLESKVNKEEAEV
                     VVKVALLCTNGSPQIRPTMSEVVSMLEGRICVPEIAPGLGNYFEDLRFQSMRGHHEDQ
                     QSSVRTQYSGTVRSETHVSSTSSNDRFEVRSVDTRSF"
     misc_feature    319..2916
                     /gene="LOC139904618"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    421..489
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    490..561
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    562..633
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    634..705
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    706..777
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    778..849
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    850..921
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    922..993
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    994..1062
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1063..1119
                     /gene="LOC139904618"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2116..2919
                     /gene="LOC139904618"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(2116..2130,2140..2142,2176..2178,2182..2184,
                     2269..2271,2317..2328,2338..2340,2347..2349,2476..2478,
                     2482..2484,2488..2493,2497..2499,2530..2532,2539..2541,
                     2590..2601)
                     /gene="LOC139904618"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(2116..2130,2140..2142,2176..2178,2182..2184,
                     2269..2271,2317..2328,2338..2340,2476..2478,2482..2484,
                     2488..2493,2497..2499,2530..2532)
                     /gene="LOC139904618"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(2128..2130,2338..2340,2347..2349,2476..2478,
                     2482..2484,2488..2490,2539..2541,2590..2601)
                     /gene="LOC139904618"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(2527..2550,2578..2601)
                     /gene="LOC139904618"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 tagtgtatgt taccattatc ataaactgtt gatttggtga atagtattat tataatttac
       61 tgattagaca caaaaatagg ataaaatttg gtgatgagaa attcagattt gatgctgttt
      121 ctagtagtca gctttaccat ttacttgaga tttgcagact ctgtggttcc acaacaagaa
      181 gtggaggctg ttgaagaaat aatgagaata atgggtgcaa caaattggag gttaaattcg
      241 aactcttgtc aacttgaaga aatatccgta cggccaaagc ctcaccctga agcggatgct
      301 agtgtccaat gtgatattat tgactgcaac aatgacaccg attgtcatat tgtaactatc
      361 acccataagt attacagtct tgatggtgtc cttccacctg gactagtaaa gcttccttac
      421 cttcgcacga ttgattttgc ttacaattac cttggtggca caataccatc tgaattgggg
      481 tcaacgcagt tgcagtcaat ttctcttctt ggaaaccgtt tttcaggaga aataccagcg
      541 gaagttggaa atattaccac tttgacttat ttgaacttcg aagcaaacaa cttttctggg
      601 atcattcctt ctgagctggg gagattagtt aacttacaat cattgatctt atcctcaaac
      661 cggttgacgg gaatggtgcc agcatcctta gctgaattga gaaatttgac agattttagg
      721 ataagtgaca acaacttcag cgggtccata cctaatttca tacagaattg gaaattacta
      781 aataaactag aattaattgg gactgggctg catggaccaa ttccttcaaa catatctctt
      841 cttaagaatt tgattgatct aagaatttgt gaaataaatg gaccaactca gggattccct
      901 cttatagata atgctaacgg tctacaaaca gttgtaatga ggaactgcaa tatttcggga
      961 gagataccgg cttatatttg gagaaaacga gatcttaaac tattggatgt tagctttaac
     1021 aagttaacag ggggaatatc aggtgacatc cttagtagga gcttgcgttt cgtatttttg
     1081 accaacaaca tgctaactgg agatataccc gactcactct tgatagaagg agctaccatt
     1141 gacttgtcct acaacaactt tactttgcaa ggacctgatc gacctacatg tcgacagaac
     1201 atgaatctaa tactaaacct gttcaagagt tctttagcag gaaacgcatt acaggatata
     1261 cttccatgca aacgagatgc caggtgtcct agatatggat gttcgatgca tgttaatagt
     1321 ggtggaaccg atctgacggt aagagaaaac aaccgtgacg ttctttacga aggggacggt
     1381 ttatttgatc gaggtgcagg aagttttcat tcgagcgcta ataataattg gggagttagt
     1441 agcactggtg atttcctcga tgacaatatc gaaacaaata tttacgttga atctttgcaa
     1501 cagaactcaa ctaacttacc tcctttgtat acaaccgcac gtttgtctcc attgtctctt
     1561 acatatatca gctattgtct actaaatggc gattacctag ttaatctgca ctttgctgaa
     1621 atacaatatg ttaatgatag cacgtacaaa agtctcggaa gacggatatt taacatatat
     1681 atccagggac aacttgttaa aagggacttc aatattgaag atgaggttgg aattggaagg
     1741 cctttggtag taccttttaa tgcaagtgtc gtaaataacg cgttagagat acgattctac
     1801 tgggccggta aagggacagc acgttttccc aaacgaggac gttatgggcc tctcgtttca
     1861 gctatctccg ttgaaccata ttctaaaacg tgttcaatca atgggaagaa gaacacggtt
     1921 gcttatgttg gttttgcaat tatgggtttg tgtctggttc ttatactctt gggaatacta
     1981 tggtggagac ggtattcaaa cggcaaaaaa agcaacgctg atgacaaaga ttttgaaggg
     2041 ctgaagttaa ccaccgtatc attttcattt aaacaactaa aaactgcaac aagaaacttt
     2101 gatgccacaa acaaaatagg agaaggtggc ttcgggcctg tttataaggg tacgctacgt
     2161 gatggcaccg taattgctgt aaagcagctt tcttcttgtt caagacaagg aaatcgtgaa
     2221 tttttaaacg aaatcggtgt aatatcttgt ttacagcacc caaatcttgt aaagcttcat
     2281 ggatgttgta ttgaagatga tcaactattg cttgtgtacg agtacatgga aaacaatagc
     2341 cttgcgagtg ctctattcga ttcgaataaa agtggattca tgttggattg ggcaacaagg
     2401 ttcaagattt gtgttgggat tgctagaggt ttagcatttc ttcatgaaga atcaagactt
     2461 aaaattgtac atagagacat aaaggctaca aatgtgcttc tcgataaaga tctgaatcca
     2521 aaaatatcag atttcggttt ggctaggcta gatgaagatg agaagacgca tgtaagcaca
     2581 cgagttgctg gaacaatagg ctacatggca ccagaatatg cactttgggg tcacttgagt
     2641 tacaaggcag atgtatacag ttttggagtt gtagctttgg aaattgtgag cggcaagaat
     2701 aacaacaaat acataccaaa caatgatagt gtttgtctac tagattgggc ttgtcgttta
     2761 caaactagta aacaatacga ggagctactt gacgagaggc tagagtcaaa agtcaacaaa
     2821 gaagaagcag aagttgttgt aaaagttgca cttttgtgca caaatggatc tcctcaaatt
     2881 aggccaacta tgtctgaggt agtcagtatg cttgaaggaa gaatatgtgt cccagaaata
     2941 gcccccgggt taggtaacta ttttgaggat ttgagatttc aatcaatgag aggccaccat
     3001 gaagaccaac aaagtagtgt cagaactcaa tattctggta ctgtcagaag cgaaacacat
     3061 gtttctagta catcttcaaa tgatcggttt gaagtacgat cagtcgacac aagatcattt
     3121 tgaaactcgg tctggtcttg attgtgtatc aaaatgttca gttttggtga atgtaaacta
     3181 acgtattgcc attttgctgg aaatgcaaca ttgtatattg gttattttca ttgtttctgt
     3241 ttcagtttcg gaagtttttc tttagttcgt gtaaatgaac atcattgttc ggtagcttct
     3301 ttactgttca tattaaaagt aaatgaacat cctgaccatt cattgtcatg attattgata
     3361 aa
//
LOCUS       XM_071886544            1239 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            DIS1-like (LOC139904619), mRNA.
ACCESSION   XM_071886544
VERSION     XM_071886544.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1239
                     /gene="LOC139904619"
                     /note="E3 ubiquitin-protein ligase DIS1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 49 Proteins"
                     /db_xref="GeneID:139904619"
     CDS             213..1133
                     /gene="LOC139904619"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase DIS1-like"
                     /protein_id="XP_071742645.1"
                     /db_xref="GeneID:139904619"
                     /translation="MSAISYYDDLRDSPEVIDPPQIEDAMDVMELVHVREPSQIPLKS
                     NQLDTSSVRDLLECPVCLNAMHPPIHQCSNGHTICSVCKPRMHNRCPTCRHELGNIRC
                     LALEKVAASLELPCKYQNYGCVGIYPYYSKLKHESQCVFRPYNCPYAGSECTVIGDIP
                     SLVAHLKDGHKVDMHNGTSFNHRYVKSNPHEVENATWMLTVFSCYGQYFCLHFEAFQL
                     GMAPVYMAFLRFMGDDDEAKNYSYSLEVGGNGRKMTWQGVPRSIRDSHRKVRDSFDGL
                     IIQRNMALFFSGGDRKELKLRVTGKIWKEQ"
     misc_feature    378..494
                     /gene="LOC139904619"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; Region: RING-HC_SIAHs; cd16571"
                     /db_xref="CDD:438233"
     misc_feature    510..1109
                     /gene="LOC139904619"
                     /note="Seven in absentia protein family; Region: Sina;
                     pfam03145"
                     /db_xref="CDD:460824"
     polyA_site      1239
                     /gene="LOC139904619"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctcatttcc agtttccaaa gtcaatttga atcttcttaa tttttcatta cggagttaaa
       61 gtatattttt tttcattata ttaaataatt taatcaatat aaaatctatc tcccagccta
      121 atcagcagca tttattattt tatactcgta attttttcac cccgtctctt ccattttcat
      181 attttgggtt ttcagcaact acaaaacaga tcatgtcagc aatatcttat tatgacgact
      241 tgagagatag cccagaggtt attgaccctc ctcaaattga agatgcaatg gatgtaatgg
      301 aacttgtaca tgttcgcgaa ccctctcaaa ttcctttaaa atcaaatcaa cttgacacta
      361 gcagcgttcg tgacctatta gaatgtccgg tttgcttgaa tgccatgcat cctcctattc
      421 atcagtgctc aaatggtcac acaatatgct ctgtttgcaa acctcggatg cacaatcgtt
      481 gtccaacatg cagacatgaa cttggaaata ttagatgtct cgcactcgaa aaagtggctg
      541 cgtctcttga acttccttgt aaatatcaga attatggatg tgtgggaata tatccgtact
      601 acagcaagtt aaaacacgaa tctcaatgtg tttttcgacc ctataattgt ccttatgctg
      661 gctcagaatg cactgttatt ggtgatattc cttctcttgt ggcccatctg aaagacggtc
      721 ataaagtcga catgcataat ggcactagtt tcaatcaccg ttatgtcaaa tcaaaccctc
      781 acgaggtgga aaatgcgaca tggatgctta cggtatttag ttgctatggt cagtactttt
      841 gtcttcattt cgaggccttc cagcttggaa tggcacctgt ttatatggca tttttgcgat
      901 tcatgggtga tgatgacgag gcgaagaatt acagctacag tcttgaggtc ggtggcaacg
      961 ggaggaagat gacgtggcaa ggagttccca gaagcataag agacagtcat cgaaaagttc
     1021 gtgatagttt cgatggccta attattcaaa gaaatatggc gcttttcttt tctgggggtg
     1081 ataggaagga attgaagctc agagttactg gtaagatttg gaaggagcag taaaatgtaa
     1141 tgtgtgatta tggtaatttt tagtagtctt ttgttgtagg ttttatgagc aaacactctt
     1201 tgcttgcttt attattactg gtactagttt cttcttttg
//
LOCUS       XR_011778913             437 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904620), ncRNA.
ACCESSION   XR_011778913
VERSION     XR_011778913.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..437
                     /gene="LOC139904620"
                     /note="uncharacterized LOC139904620; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904620"
     ncRNA           1..437
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904620"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904620"
ORIGIN      
        1 caagaacatc taattgctca agaacatcta attatattca acatctattt gttcaagata
       61 tatgattact aaccaattga ggatatccat catcaatcct aataatattt ttcagctgaa
      121 aaaaggaaac caggagtgca aggtgatggt aaaagtacac tatgtctgga aaaaaattct
      181 ttaagtctaa tccaactaag ccatcctcac ttgagatggt tttgcttgtt caggagggaa
      241 acaaaattag agctggtatg gaaaagcaag ttattcacta ttttgagaaa acattcactg
      301 aaggtcattt tttgattctg agtaatttca aagtcatcga ctctactgat gactatgtga
      361 agttcatcaa caatccttac aagattatga tcaataagaa tcaaactaag gttcacaaat
      421 gtgctgactt cttacct
//
LOCUS       XM_071886546            1399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aspartyl protease AED3-like
            (LOC139904621), mRNA.
ACCESSION   XM_071886546
VERSION     XM_071886546.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1399
                     /gene="LOC139904621"
                     /note="aspartyl protease AED3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904621"
     CDS             138..1256
                     /gene="LOC139904621"
                     /codon_start=1
                     /product="aspartyl protease AED3-like"
                     /protein_id="XP_071742647.1"
                     /db_xref="GeneID:139904621"
                     /translation="MQAEDQTRLSYLSSLVVAGKSFVPIGSGRQVTQTPSYIVKAKIG
                     TPPQTLFMALDTSTDMAMVPCSGCVGCSSGSPAFSFAKSTTFTSLNCNAVQCKQVQNS
                     NCLGTTCLMNMTYGAASIAANLAQDNITLATDTVTGYSFGCIQKAIGASLPPQGVLGL
                     GRGSLSLLSQSKNLYKSTFSYCLPSFKSPNFSGTLRLGPIGQPKNIKYTPLLTNPRKP
                     SLYYVKLIGIKVGPKLVNIPPTAFALNTNNGAGTIIDSGTVFTRLVTPAYTAVRDEFR
                     RRMGRGAVVSSLGGFDTCYKVAIGKQIPTMTFMFEGADLSMKQENFLIHSTTGGLTCL
                     AMSASPSLNVIANMQQQNHRILFDVPNSRIGISAESCS"
     misc_feature    246..1250
                     /gene="LOC139904621"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(300..302,306..308,312..314,471..479,606..608)
                     /gene="LOC139904621"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    300..308
                     /gene="LOC139904621"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    300..302
                     /gene="LOC139904621"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(471..482,492..503)
                     /gene="LOC139904621"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 tcatccgaac ccagtcccta aaccccacat gcaccagcac tgaccaagac tcaactctca
       61 aagtcttcca cgtgtcaagc ccatgctcac ccttccacac cgccacaaaa ccctcatggt
      121 ccgaacccat ccttcaaatg caagccgagg accaaacccg tctctcttat ctatcctcct
      181 tagtcgtagc cggaaaatcg tttgttccta ttgggtcagg aagacaagta acacaaacac
      241 ctagttatat cgttaaagct aaaattggaa caccacctca aactttattt atggcacttg
      301 atactagcac tgatatggct atggttcctt gtagtgggtg tgttggttgt agctcaggct
      361 cccctgcttt ttcttttgct aaatctacta cttttacttc tcttaactgc aatgctgttc
      421 aatgcaaaca ggtgcaaaac tcgaattgtc taggaaccac atgcctaatg aacatgacat
      481 atggagccgc atctatagcc gctaacttgg ctcaagacaa tataacccta gcaactgaca
      541 ccgtcacggg ctactcattc gggtgcatcc aaaaggcaat cggggcatca ctcccgccac
      601 aaggtgtttt aggtcttggt cgcggttcac tctcgttact atctcaatcc aaaaatcttt
      661 acaaatccac attttcgtac tgtctaccta gcttcaaatc gccgaatttc tctggtaccc
      721 taagattagg ccccattgga caaccgaaaa atatcaagta cacaccgtta cttacaaacc
      781 caagaaagcc ttcgctttac tatgtgaaat tgatcggtat caaagttggc cctaagctcg
      841 ttaacatccc tccaactgct ttcgcactca acacgaacaa tggagctggc accatcattg
      901 actctgggac tgtcttcaca agactagtga ctccagcata cacggccgtt agagacgaat
      961 tcagaaggag aatgggacga ggcgcagttg tgtcatcact agggggattc gacacatgct
     1021 acaaagtcgc tatcggaaaa cagattccaa caatgacgtt tatgttcgag ggagctgatc
     1081 tgtcaatgaa acaagaaaac ttcttgatcc acagcacaac aggcggactc acctgtttgg
     1141 ccatgtcagc atcaccgtca ctgaacgtga tcgcgaatat gcagcaacag aatcatagga
     1201 ttctttttga cgtgccaaat tcaagaattg gcatatctgc tgaaagttgt tcgtagatca
     1261 cgtgaactcc ttcatggttt ctgattttta gtttcttgtc ttgttgcttt gtattagtat
     1321 tacttaaaat cattgtcacg tgggttgtgt ttttttaatt tcctatgtaa acgtcggtaa
     1381 aattctattt atgctgtat
//
LOCUS       XR_011778914             276 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904622), ncRNA.
ACCESSION   XR_011778914
VERSION     XR_011778914.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..276
                     /gene="LOC139904622"
                     /note="uncharacterized LOC139904622; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904622"
     ncRNA           1..276
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904622"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904622"
ORIGIN      
        1 tttataagtc tgtaatgttt tctcagtggc tgtatttctg cttctggtcc agttggttag
       61 tgatgattaa gtggtcattt gggttctcat tagatgccat ctcctgtact gctacaactg
      121 tctctcaagg tgaagactat agtggaatag agacacttct attctgagaa tttcatgtcc
      181 tgatatagat tgcagtatgt atgaaaatgt ttatcaaatt tgttgtaaat cttaattttc
      241 caaatatgtt ttaataatat tagttggagt atgatg
//
LOCUS       XM_071886547            2448 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase CES101
            (LOC139904623), transcript variant X1, mRNA.
ACCESSION   XM_071886547
VERSION     XM_071886547.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2448
                     /gene="LOC139904623"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904623"
     CDS             51..2342
                     /gene="LOC139904623"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101 isoform X1"
                     /protein_id="XP_071742648.1"
                     /db_xref="GeneID:139904623"
                     /translation="MVSPYLGIFYNKNTYNDNYNNKIRYRDSDESTGMPVWVANRNNP
                     IPDVYGKLIIDAHGKLSILSNGGTVLDLFTPSLVTRNASLTLLDSGNLVLQQLYPNMS
                     VKQVLWQSFDYPTDTLLPGMKLGINLETGHRWSLSSWWSPQLPADGSFTLTIDPNGTD
                     QLVMMWRGNTHWRSGPWVNSEFKNTNLQPSGSDVRVYYVSNATEKLFAYITKTYDSLP
                     VLRMLENDLWATTLTLDTYCLAVNRPPGCVEAEFEKLECRKHYIDEFYYSSGYYIFRY
                     EYVYDESYNLSLYDCKRLCWSNCSCVAYTHANDKCRTFGQIIYNPEEAQHNPYGKYYA
                     FAYYGGGSELSEEERKKKKKSKTLVIGLIIMIVPLALLLLTYLAYAAYKKYDIKGKAK
                     KMKKLALLQMRRLYHYVRTSKNVYVEVHYFTFQSISSATNSFSTTNKLGEGGFGTVYK
                     TSQGKLADGQEVAVKRLSKSSGQGVKEFKNEIELIAKLQHTNLVRLIGCCVEKQEKIL
                     VYEYMPNNSLDFFLFVTRLLTDPSKKGLLNWNNRFVIIDGIAQGLLYLHKFSRLRVIH
                     RDLKASNILLDDYLKPKISDFGMAKLFGINESEANTSKVVGTRGYMPPEYLIDGIVST
                     KIDVFGFGVLLLEIVSSKMNRGSYDVEHPLNLLGLAWELWNEGRGLELMDPVLEDSCT
                     PKEVMTCIHVGLLCVQDNVMDRPTMSEVVSMLTNENMHLPEPKRPAFFIERFDAETGR
                     DDTHNNVGNVSVNGQSISILFAR"
     misc_feature    order(111..113,117..119,123..125,213..215,219..221,
                     225..227,231..233,237..239,309..311,315..317,321..323,
                     327..329,333..335)
                     /gene="LOC139904623"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(120..122,156..161,261..263,267..269,291..293,
                     297..299,303..305,309..338,354..392)
                     /gene="LOC139904623"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    153..467
                     /gene="LOC139904623"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    810..1046
                     /gene="LOC139904623"
                     /note="PAN/APPLE-like domain; present in N-terminal (N)
                     domains of plasminogen/ hepatocyte growth factor proteins,
                     plasma prekallikrein/coagulation factor XI and microneme
                     antigen proteins, plant receptor-like protein kinases, and
                     various nematode and leech...; Region: PAN_APPLE; cl00112"
                     /db_xref="CDD:469620"
     misc_feature    order(870..872,876..878,930..932)
                     /gene="LOC139904623"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238074"
     misc_feature    1368..2198
                     /gene="LOC139904623"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1368..1382,1392..1394,1437..1439,1443..1445,
                     1530..1532,1578..1589,1599..1601,1605..1607,1752..1754,
                     1758..1760,1764..1769,1773..1775,1806..1808,1815..1817,
                     1869..1880)
                     /gene="LOC139904623"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1368..1382,1392..1394,1437..1439,1443..1445,
                     1530..1532,1578..1589,1599..1601,1752..1754,1758..1760,
                     1764..1769,1773..1775,1806..1808)
                     /gene="LOC139904623"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1380..1382,1599..1601,1605..1607,1752..1754,
                     1758..1760,1764..1766,1815..1817,1869..1880)
                     /gene="LOC139904623"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1803..1826,1857..1880)
                     /gene="LOC139904623"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     misc_feature    2196..2339
                     /gene="LOC139904623"
                     /note="Domain of unknown function (DUF3403); Region:
                     DUF3403; pfam11883"
                     /db_xref="CDD:463385"
     polyA_site      2448
                     /gene="LOC139904623"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taatttcatc caacaaggtc ttcactctaa agtttttcag ctttggtaca atggtgagcc
       61 cttatttagg gatattttac aacaagaata cgtacaatga caactacaat aacaaaatca
      121 gatatcgtga ttcagacgag tcgactggta tgcctgtttg ggtagcaaac agaaacaatc
      181 ctattccgga tgtatatggc aagctgatca tagatgccca tggaaagctt agcattttat
      241 ctaatggagg cactgttctt gatctattta ctcctagttt ggttacacgt aacgcaagtc
      301 ttacactttt ggattcgggg aatttggtat tacaacaact gtatccaaat atgtcggtta
      361 agcaggtttt atggcaaagc tttgattacc caacagacac acttctaccc gggatgaaac
      421 tgggaattaa tctggagact gggcatagat ggtcactcag ttcttggtgg agcccacagc
      481 taccagccga cgggtcattt acattaacaa tagacccaaa cggcacagat caactagtga
      541 tgatgtggcg cggaaataca cactggagga gtgggccatg ggtgaacagt gaatttaaaa
      601 atactaatct acaaccgtct ggttcagatg ttcgtgtgta ctatgtgtct aacgcgactg
      661 agaaattgtt cgcatatata acgaaaacat atgattcgtt acccgtgcta aggatgcttg
      721 aaaatgatct ttgggctaca actttaacgt tagacacgta ttgcctagca gttaatcggc
      781 ctcctggttg tgttgaagcc gaatttgaga aactagaatg tagaaaacat tatatagatg
      841 aattttatta ttcgtcaggc tattacattt ttcggtatga gtatgtatat gacgaaagct
      901 ataacttgag tttatatgat tgcaaaagat tatgttggag taattgttct tgcgtagctt
      961 atactcatgc caacgacaag tgtaggactt ttggtcaaat aatatataat ccagaagaag
     1021 ctcaacataa cccatacggg aagtattatg ccttcgcgta ctatggaggt ggatcagaac
     1081 tatcagaaga agaaaggaag aaaaagaaga aaagtaagac cttagtaatt gggttgatca
     1141 tcatgattgt acccttagct ctgctcctat taacctatct ggcatatgca gcatacaaga
     1201 agtacgatat taaagggaag gctaaaaaaa tgaaaaagtt ggcgctgctt cagatgagac
     1261 gtctctacca ttacgtacga actagtaaga atgtatatgt tgaagtacat tatttcacct
     1321 ttcaaagcat ctcatctgca acaaacagtt tttcaaccac aaataagctt ggagaaggag
     1381 gctttggaac tgtttataag acttcacagg gtaaattagc tgatgggcaa gaagttgcgg
     1441 tgaaacgact ttcaaaaagc tctggacaag gtgtcaagga atttaagaac gaaatcgaac
     1501 tcattgctaa acttcaacac actaatctag tcagacttat agggtgttgt gttgaaaaac
     1561 aagaaaaaat ccttgtatac gagtacatgc ctaataatag cttggatttc tttctatttg
     1621 ttactcgatt attaacagat cccagtaaga aaggattact gaattggaat aatcgctttg
     1681 taatcattga cggcattgct caaggacttc tatatctcca taagttttca aggttgaggg
     1741 taatacatag agatctaaaa gccagtaata tcttgctaga tgattattta aagccaaaaa
     1801 tatcagattt tggtatggct aagttatttg ggatcaacga atccgaagca aatacaagca
     1861 aagttgttgg aacacgtggt tatatgccac ccgagtatct aatagatggc attgtttcaa
     1921 ccaagatcga tgtctttggt tttggtgttc tattgctaga gatcgttagc agcaaaatga
     1981 atcgtgggag ctatgatgtc gaacacccac tcaaccttct aggacttgcc tgggaactgt
     2041 ggaatgaagg cagaggtttg gagctgatgg atccagtact tgaagattca tgtactccaa
     2101 aagaagtaat gacatgcatt catgttggtc tcttatgtgt tcaagataat gtcatggata
     2161 gaccgactat gtccgaagtt gtatcgatgc tcacaaatga aaatatgcat cttcctgagc
     2221 caaagcgacc agcgttcttc attgagaggt ttgatgcaga gactggaaga gatgatactc
     2281 ataataatgt cggaaatgta tccgtaaatg ggcaatcaat atccatttta tttgctagat
     2341 agatactgca aaatactact gtaccgtact acattatacc tatgaaatta tactgaacta
     2401 ataatgtgtc actagttcga ttataatagt ttttagtttg ttaattca
//
LOCUS       XM_071886548            2439 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase CES101
            (LOC139904623), transcript variant X2, mRNA.
ACCESSION   XM_071886548
VERSION     XM_071886548.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2439
                     /gene="LOC139904623"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904623"
     CDS             51..2333
                     /gene="LOC139904623"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101 isoform X2"
                     /protein_id="XP_071742649.1"
                     /db_xref="GeneID:139904623"
                     /translation="MVSPYLGIFYNKNTYNDNYNNKIRYRDSDESTGMPVWVANRNNP
                     IPDVYGKLIIDAHGKLSILSNGGTVLDLFTPSLVTRNASLTLLDSGNLVLQQLYPNMS
                     VKQVLWQSFDYPTDTLLPGMKLGINLETGHRWSLSSWWSPQLPADGSFTLTIDPNGTD
                     QLVMMWRGNTHWRSGPWVNSEFKNTNLQPSGSDVRVYYVSNATEKLFAYITKTYDSLP
                     VLRMLENDLWATTLTLDTYCLAVNRPPGCVEAEFEKLECRKHYIDEFYYSSGYYIFRY
                     EYVYDESYNLSLYDCKRLCWSNCSCVAYTHANDKCRTFGQIIYNPEEAQHNPYGKYYA
                     FAYYGGGSELSEEERKKKKKSKTLVIGLIIMIVPLALLLLTYLAYAAYKKYDIKGKAK
                     KMKKLALLQMRRLYHYVRTSKNVYVEVHYFTFQSISSATNSFSTTNKLGEGGFGTVYK
                     GKLADGQEVAVKRLSKSSGQGVKEFKNEIELIAKLQHTNLVRLIGCCVEKQEKILVYE
                     YMPNNSLDFFLFVTRLLTDPSKKGLLNWNNRFVIIDGIAQGLLYLHKFSRLRVIHRDL
                     KASNILLDDYLKPKISDFGMAKLFGINESEANTSKVVGTRGYMPPEYLIDGIVSTKID
                     VFGFGVLLLEIVSSKMNRGSYDVEHPLNLLGLAWELWNEGRGLELMDPVLEDSCTPKE
                     VMTCIHVGLLCVQDNVMDRPTMSEVVSMLTNENMHLPEPKRPAFFIERFDAETGRDDT
                     HNNVGNVSVNGQSISILFAR"
     misc_feature    order(111..113,117..119,123..125,213..215,219..221,
                     225..227,231..233,237..239,309..311,315..317,321..323,
                     327..329,333..335)
                     /gene="LOC139904623"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(120..122,156..161,261..263,267..269,291..293,
                     297..299,303..305,309..338,354..392)
                     /gene="LOC139904623"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    153..467
                     /gene="LOC139904623"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    810..1046
                     /gene="LOC139904623"
                     /note="PAN/APPLE-like domain; present in N-terminal (N)
                     domains of plasminogen/ hepatocyte growth factor proteins,
                     plasma prekallikrein/coagulation factor XI and microneme
                     antigen proteins, plant receptor-like protein kinases, and
                     various nematode and leech...; Region: PAN_APPLE; cl00112"
                     /db_xref="CDD:469620"
     misc_feature    order(870..872,876..878,930..932)
                     /gene="LOC139904623"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238074"
     misc_feature    1368..2189
                     /gene="LOC139904623"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1368..1382,1392..1394,1428..1430,1434..1436,
                     1521..1523,1569..1580,1590..1592,1596..1598,1743..1745,
                     1749..1751,1755..1760,1764..1766,1797..1799,1806..1808,
                     1860..1871)
                     /gene="LOC139904623"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1368..1382,1392..1394,1428..1430,1434..1436,
                     1521..1523,1569..1580,1590..1592,1743..1745,1749..1751,
                     1755..1760,1764..1766,1797..1799)
                     /gene="LOC139904623"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1380..1382,1590..1592,1596..1598,1743..1745,
                     1749..1751,1755..1757,1806..1808,1860..1871)
                     /gene="LOC139904623"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1794..1817,1848..1871)
                     /gene="LOC139904623"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     misc_feature    2187..2330
                     /gene="LOC139904623"
                     /note="Domain of unknown function (DUF3403); Region:
                     DUF3403; pfam11883"
                     /db_xref="CDD:463385"
     polyA_site      2439
                     /gene="LOC139904623"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taatttcatc caacaaggtc ttcactctaa agtttttcag ctttggtaca atggtgagcc
       61 cttatttagg gatattttac aacaagaata cgtacaatga caactacaat aacaaaatca
      121 gatatcgtga ttcagacgag tcgactggta tgcctgtttg ggtagcaaac agaaacaatc
      181 ctattccgga tgtatatggc aagctgatca tagatgccca tggaaagctt agcattttat
      241 ctaatggagg cactgttctt gatctattta ctcctagttt ggttacacgt aacgcaagtc
      301 ttacactttt ggattcgggg aatttggtat tacaacaact gtatccaaat atgtcggtta
      361 agcaggtttt atggcaaagc tttgattacc caacagacac acttctaccc gggatgaaac
      421 tgggaattaa tctggagact gggcatagat ggtcactcag ttcttggtgg agcccacagc
      481 taccagccga cgggtcattt acattaacaa tagacccaaa cggcacagat caactagtga
      541 tgatgtggcg cggaaataca cactggagga gtgggccatg ggtgaacagt gaatttaaaa
      601 atactaatct acaaccgtct ggttcagatg ttcgtgtgta ctatgtgtct aacgcgactg
      661 agaaattgtt cgcatatata acgaaaacat atgattcgtt acccgtgcta aggatgcttg
      721 aaaatgatct ttgggctaca actttaacgt tagacacgta ttgcctagca gttaatcggc
      781 ctcctggttg tgttgaagcc gaatttgaga aactagaatg tagaaaacat tatatagatg
      841 aattttatta ttcgtcaggc tattacattt ttcggtatga gtatgtatat gacgaaagct
      901 ataacttgag tttatatgat tgcaaaagat tatgttggag taattgttct tgcgtagctt
      961 atactcatgc caacgacaag tgtaggactt ttggtcaaat aatatataat ccagaagaag
     1021 ctcaacataa cccatacggg aagtattatg ccttcgcgta ctatggaggt ggatcagaac
     1081 tatcagaaga agaaaggaag aaaaagaaga aaagtaagac cttagtaatt gggttgatca
     1141 tcatgattgt acccttagct ctgctcctat taacctatct ggcatatgca gcatacaaga
     1201 agtacgatat taaagggaag gctaaaaaaa tgaaaaagtt ggcgctgctt cagatgagac
     1261 gtctctacca ttacgtacga actagtaaga atgtatatgt tgaagtacat tatttcacct
     1321 ttcaaagcat ctcatctgca acaaacagtt tttcaaccac aaataagctt ggagaaggag
     1381 gctttggaac tgtttataag ggtaaattag ctgatgggca agaagttgcg gtgaaacgac
     1441 tttcaaaaag ctctggacaa ggtgtcaagg aatttaagaa cgaaatcgaa ctcattgcta
     1501 aacttcaaca cactaatcta gtcagactta tagggtgttg tgttgaaaaa caagaaaaaa
     1561 tccttgtata cgagtacatg cctaataata gcttggattt ctttctattt gttactcgat
     1621 tattaacaga tcccagtaag aaaggattac tgaattggaa taatcgcttt gtaatcattg
     1681 acggcattgc tcaaggactt ctatatctcc ataagttttc aaggttgagg gtaatacata
     1741 gagatctaaa agccagtaat atcttgctag atgattattt aaagccaaaa atatcagatt
     1801 ttggtatggc taagttattt gggatcaacg aatccgaagc aaatacaagc aaagttgttg
     1861 gaacacgtgg ttatatgcca cccgagtatc taatagatgg cattgtttca accaagatcg
     1921 atgtctttgg ttttggtgtt ctattgctag agatcgttag cagcaaaatg aatcgtggga
     1981 gctatgatgt cgaacaccca ctcaaccttc taggacttgc ctgggaactg tggaatgaag
     2041 gcagaggttt ggagctgatg gatccagtac ttgaagattc atgtactcca aaagaagtaa
     2101 tgacatgcat tcatgttggt ctcttatgtg ttcaagataa tgtcatggat agaccgacta
     2161 tgtccgaagt tgtatcgatg ctcacaaatg aaaatatgca tcttcctgag ccaaagcgac
     2221 cagcgttctt cattgagagg tttgatgcag agactggaag agatgatact cataataatg
     2281 tcggaaatgt atccgtaaat gggcaatcaa tatccatttt atttgctaga tagatactgc
     2341 aaaatactac tgtaccgtac tacattatac ctatgaaatt atactgaact aataatgtgt
     2401 cactagttcg attataatag tttttagttt gttaattca
//
LOCUS       XM_071886549            2430 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase CES101
            (LOC139904623), transcript variant X3, mRNA.
ACCESSION   XM_071886549
VERSION     XM_071886549.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2430
                     /gene="LOC139904623"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904623"
     CDS             51..2324
                     /gene="LOC139904623"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101 isoform X3"
                     /protein_id="XP_071742650.1"
                     /db_xref="GeneID:139904623"
                     /translation="MVSPYLGIFYNKNTYNDNYNNKIRYRDSDESTGMPVWVANRNNP
                     IPDVYGKLIIDAHGKLSILSNGGTVLDLFTPSLVTRNASLTLLDSGNLVLQQLYPNMS
                     VKQVLWQSFDYPTDTLLPGMKLGINLETGHRWSLSSWWSPQLPADGSFTLTIDPNGTD
                     QLVMMWRGNTHWRSGPWVNSEFKNTNLQPSGSDVRVYYVSNATEKLFAYITKTYDSLP
                     VLRMLENDLWATTLTLDTYCLAVNRPPGCVEAEFEKLECRKHYIDEFYYSSGYYIFRY
                     EYVYDESYNLSLYDCKRLCWSNCSCVAYTHANDKCRTFGQIIYNPEEAQHNPYGKYYA
                     FAYYGGGSELSEEERKKKKKSKTLVIGLIIMIVPLALLLLTYLAYAAYKKYDIKGKAK
                     KMKKLALLQMRRLYHYVRTSKNVYVEVHYFTFQSISSATNSFSTTNKLGEGGFGTVYK
                     TSQGKLADGQEVAVKRLSKSSGQGVKEFKNEIELIAKLQHTNLVRLIGCCVEKQEKIL
                     VYEYMPNNSLDFFLFDPSKKGLLNWNNRFVIIDGIAQGLLYLHKFSRLRVIHRDLKAS
                     NILLDDYLKPKISDFGMAKLFGINESEANTSKVVGTRGYMPPEYLIDGIVSTKIDVFG
                     FGVLLLEIVSSKMNRGSYDVEHPLNLLGLAWELWNEGRGLELMDPVLEDSCTPKEVMT
                     CIHVGLLCVQDNVMDRPTMSEVVSMLTNENMHLPEPKRPAFFIERFDAETGRDDTHNN
                     VGNVSVNGQSISILFAR"
     misc_feature    order(111..113,117..119,123..125,213..215,219..221,
                     225..227,231..233,237..239,309..311,315..317,321..323,
                     327..329,333..335)
                     /gene="LOC139904623"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(120..122,156..161,261..263,267..269,291..293,
                     297..299,303..305,309..338,354..392)
                     /gene="LOC139904623"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    153..467
                     /gene="LOC139904623"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    810..1046
                     /gene="LOC139904623"
                     /note="PAN/APPLE-like domain; present in N-terminal (N)
                     domains of plasminogen/ hepatocyte growth factor proteins,
                     plasma prekallikrein/coagulation factor XI and microneme
                     antigen proteins, plant receptor-like protein kinases, and
                     various nematode and leech...; Region: PAN_APPLE; cl00112"
                     /db_xref="CDD:469620"
     misc_feature    order(870..872,876..878,930..932)
                     /gene="LOC139904623"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238074"
     misc_feature    1368..2180
                     /gene="LOC139904623"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1368..1382,1392..1394,1437..1439,1443..1445,
                     1530..1532,1578..1589,1599..1601,1605..1607,1734..1736,
                     1740..1742,1746..1751,1755..1757,1788..1790,1797..1799,
                     1851..1862)
                     /gene="LOC139904623"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1368..1382,1392..1394,1437..1439,1443..1445,
                     1530..1532,1578..1589,1599..1601,1734..1736,1740..1742,
                     1746..1751,1755..1757,1788..1790)
                     /gene="LOC139904623"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1380..1382,1599..1601,1605..1607,1734..1736,
                     1740..1742,1746..1748,1797..1799,1851..1862)
                     /gene="LOC139904623"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1785..1808,1839..1862)
                     /gene="LOC139904623"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     misc_feature    2178..2321
                     /gene="LOC139904623"
                     /note="Domain of unknown function (DUF3403); Region:
                     DUF3403; pfam11883"
                     /db_xref="CDD:463385"
     polyA_site      2430
                     /gene="LOC139904623"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taatttcatc caacaaggtc ttcactctaa agtttttcag ctttggtaca atggtgagcc
       61 cttatttagg gatattttac aacaagaata cgtacaatga caactacaat aacaaaatca
      121 gatatcgtga ttcagacgag tcgactggta tgcctgtttg ggtagcaaac agaaacaatc
      181 ctattccgga tgtatatggc aagctgatca tagatgccca tggaaagctt agcattttat
      241 ctaatggagg cactgttctt gatctattta ctcctagttt ggttacacgt aacgcaagtc
      301 ttacactttt ggattcgggg aatttggtat tacaacaact gtatccaaat atgtcggtta
      361 agcaggtttt atggcaaagc tttgattacc caacagacac acttctaccc gggatgaaac
      421 tgggaattaa tctggagact gggcatagat ggtcactcag ttcttggtgg agcccacagc
      481 taccagccga cgggtcattt acattaacaa tagacccaaa cggcacagat caactagtga
      541 tgatgtggcg cggaaataca cactggagga gtgggccatg ggtgaacagt gaatttaaaa
      601 atactaatct acaaccgtct ggttcagatg ttcgtgtgta ctatgtgtct aacgcgactg
      661 agaaattgtt cgcatatata acgaaaacat atgattcgtt acccgtgcta aggatgcttg
      721 aaaatgatct ttgggctaca actttaacgt tagacacgta ttgcctagca gttaatcggc
      781 ctcctggttg tgttgaagcc gaatttgaga aactagaatg tagaaaacat tatatagatg
      841 aattttatta ttcgtcaggc tattacattt ttcggtatga gtatgtatat gacgaaagct
      901 ataacttgag tttatatgat tgcaaaagat tatgttggag taattgttct tgcgtagctt
      961 atactcatgc caacgacaag tgtaggactt ttggtcaaat aatatataat ccagaagaag
     1021 ctcaacataa cccatacggg aagtattatg ccttcgcgta ctatggaggt ggatcagaac
     1081 tatcagaaga agaaaggaag aaaaagaaga aaagtaagac cttagtaatt gggttgatca
     1141 tcatgattgt acccttagct ctgctcctat taacctatct ggcatatgca gcatacaaga
     1201 agtacgatat taaagggaag gctaaaaaaa tgaaaaagtt ggcgctgctt cagatgagac
     1261 gtctctacca ttacgtacga actagtaaga atgtatatgt tgaagtacat tatttcacct
     1321 ttcaaagcat ctcatctgca acaaacagtt tttcaaccac aaataagctt ggagaaggag
     1381 gctttggaac tgtttataag acttcacagg gtaaattagc tgatgggcaa gaagttgcgg
     1441 tgaaacgact ttcaaaaagc tctggacaag gtgtcaagga atttaagaac gaaatcgaac
     1501 tcattgctaa acttcaacac actaatctag tcagacttat agggtgttgt gttgaaaaac
     1561 aagaaaaaat ccttgtatac gagtacatgc ctaataatag cttggatttc tttctatttg
     1621 atcccagtaa gaaaggatta ctgaattgga ataatcgctt tgtaatcatt gacggcattg
     1681 ctcaaggact tctatatctc cataagtttt caaggttgag ggtaatacat agagatctaa
     1741 aagccagtaa tatcttgcta gatgattatt taaagccaaa aatatcagat tttggtatgg
     1801 ctaagttatt tgggatcaac gaatccgaag caaatacaag caaagttgtt ggaacacgtg
     1861 gttatatgcc acccgagtat ctaatagatg gcattgtttc aaccaagatc gatgtctttg
     1921 gttttggtgt tctattgcta gagatcgtta gcagcaaaat gaatcgtggg agctatgatg
     1981 tcgaacaccc actcaacctt ctaggacttg cctgggaact gtggaatgaa ggcagaggtt
     2041 tggagctgat ggatccagta cttgaagatt catgtactcc aaaagaagta atgacatgca
     2101 ttcatgttgg tctcttatgt gttcaagata atgtcatgga tagaccgact atgtccgaag
     2161 ttgtatcgat gctcacaaat gaaaatatgc atcttcctga gccaaagcga ccagcgttct
     2221 tcattgagag gtttgatgca gagactggaa gagatgatac tcataataat gtcggaaatg
     2281 tatccgtaaa tgggcaatca atatccattt tatttgctag atagatactg caaaatacta
     2341 ctgtaccgta ctacattata cctatgaaat tatactgaac taataatgtg tcactagttc
     2401 gattataata gtttttagtt tgttaattca
//
LOCUS       XM_071886550            2364 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase CES101
            (LOC139904623), transcript variant X4, mRNA.
ACCESSION   XM_071886550
VERSION     XM_071886550.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2364
                     /gene="LOC139904623"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904623"
     CDS             51..2258
                     /gene="LOC139904623"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101 isoform X4"
                     /protein_id="XP_071742651.1"
                     /db_xref="GeneID:139904623"
                     /translation="MVSPYLGIFYNKNTYNDNYNNKIRYRDSDESTGMPVWVANRNNP
                     IPDVYGKLIIDAHGKLSILSNGGTVLDLFTPSLVTRNASLTLLDSGNLVLQQLYPNMS
                     VKQVLWQSFDYPTDTLLPGMKLGINLETGHRWSLSSWWSPQLPADGSFTLTIDPNGTD
                     QLVMMWRGNTHWRSGPWVNSEFKNTNLQPSGSDVRVYYVSNATEKLFAYITKTYDSLP
                     VLRMLENDLWATTLTLDTYCLAVNRPPGCVEAEFEKLECRKHYIDEFYYSSGYYIFRY
                     EYVYDESYNLSLYDCKRLCWSNCSCVAYTHANDKCRTFGQIIYNPEEAQHNPYGKYYA
                     FAYYGGGSELSEEERKKKKKSKTLVIGLIIMIVPLALLLLTYLAYAAYKKYDIKGKAK
                     KMKKLALLQMRRLYHYVRTSKNVYVEVHYFTFQSISSATNSFSTTNKLGEGGFGTVYK
                     TSQGKLADGQEVAVKRLSKSSGQGVKEFKNEIELIAKLQHTNLVRLIGCCVEKQEKIL
                     VYEYMPNNSLDFFLFGLLYLHKFSRLRVIHRDLKASNILLDDYLKPKISDFGMAKLFG
                     INESEANTSKVVGTRGYMPPEYLIDGIVSTKIDVFGFGVLLLEIVSSKMNRGSYDVEH
                     PLNLLGLAWELWNEGRGLELMDPVLEDSCTPKEVMTCIHVGLLCVQDNVMDRPTMSEV
                     VSMLTNENMHLPEPKRPAFFIERFDAETGRDDTHNNVGNVSVNGQSISILFAR"
     misc_feature    order(111..113,117..119,123..125,213..215,219..221,
                     225..227,231..233,237..239,309..311,315..317,321..323,
                     327..329,333..335)
                     /gene="LOC139904623"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(120..122,156..161,261..263,267..269,291..293,
                     297..299,303..305,309..338,354..392)
                     /gene="LOC139904623"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    153..467
                     /gene="LOC139904623"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    810..1046
                     /gene="LOC139904623"
                     /note="PAN/APPLE-like domain; present in N-terminal (N)
                     domains of plasminogen/ hepatocyte growth factor proteins,
                     plasma prekallikrein/coagulation factor XI and microneme
                     antigen proteins, plant receptor-like protein kinases, and
                     various nematode and leech...; Region: PAN_APPLE; cl00112"
                     /db_xref="CDD:469620"
     misc_feature    order(870..872,876..878,930..932)
                     /gene="LOC139904623"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238074"
     misc_feature    1368..2114
                     /gene="LOC139904623"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1368..1379,1386..1388,1392..1394,1437..1439,
                     1443..1445,1530..1532,1578..1589,1668..1670,1680..1685,
                     1689..1691,1719..1724)
                     /gene="LOC139904623"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2112..2255
                     /gene="LOC139904623"
                     /note="Domain of unknown function (DUF3403); Region:
                     DUF3403; pfam11883"
                     /db_xref="CDD:463385"
     polyA_site      2364
                     /gene="LOC139904623"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taatttcatc caacaaggtc ttcactctaa agtttttcag ctttggtaca atggtgagcc
       61 cttatttagg gatattttac aacaagaata cgtacaatga caactacaat aacaaaatca
      121 gatatcgtga ttcagacgag tcgactggta tgcctgtttg ggtagcaaac agaaacaatc
      181 ctattccgga tgtatatggc aagctgatca tagatgccca tggaaagctt agcattttat
      241 ctaatggagg cactgttctt gatctattta ctcctagttt ggttacacgt aacgcaagtc
      301 ttacactttt ggattcgggg aatttggtat tacaacaact gtatccaaat atgtcggtta
      361 agcaggtttt atggcaaagc tttgattacc caacagacac acttctaccc gggatgaaac
      421 tgggaattaa tctggagact gggcatagat ggtcactcag ttcttggtgg agcccacagc
      481 taccagccga cgggtcattt acattaacaa tagacccaaa cggcacagat caactagtga
      541 tgatgtggcg cggaaataca cactggagga gtgggccatg ggtgaacagt gaatttaaaa
      601 atactaatct acaaccgtct ggttcagatg ttcgtgtgta ctatgtgtct aacgcgactg
      661 agaaattgtt cgcatatata acgaaaacat atgattcgtt acccgtgcta aggatgcttg
      721 aaaatgatct ttgggctaca actttaacgt tagacacgta ttgcctagca gttaatcggc
      781 ctcctggttg tgttgaagcc gaatttgaga aactagaatg tagaaaacat tatatagatg
      841 aattttatta ttcgtcaggc tattacattt ttcggtatga gtatgtatat gacgaaagct
      901 ataacttgag tttatatgat tgcaaaagat tatgttggag taattgttct tgcgtagctt
      961 atactcatgc caacgacaag tgtaggactt ttggtcaaat aatatataat ccagaagaag
     1021 ctcaacataa cccatacggg aagtattatg ccttcgcgta ctatggaggt ggatcagaac
     1081 tatcagaaga agaaaggaag aaaaagaaga aaagtaagac cttagtaatt gggttgatca
     1141 tcatgattgt acccttagct ctgctcctat taacctatct ggcatatgca gcatacaaga
     1201 agtacgatat taaagggaag gctaaaaaaa tgaaaaagtt ggcgctgctt cagatgagac
     1261 gtctctacca ttacgtacga actagtaaga atgtatatgt tgaagtacat tatttcacct
     1321 ttcaaagcat ctcatctgca acaaacagtt tttcaaccac aaataagctt ggagaaggag
     1381 gctttggaac tgtttataag acttcacagg gtaaattagc tgatgggcaa gaagttgcgg
     1441 tgaaacgact ttcaaaaagc tctggacaag gtgtcaagga atttaagaac gaaatcgaac
     1501 tcattgctaa acttcaacac actaatctag tcagacttat agggtgttgt gttgaaaaac
     1561 aagaaaaaat ccttgtatac gagtacatgc ctaataatag cttggatttc tttctatttg
     1621 gacttctata tctccataag ttttcaaggt tgagggtaat acatagagat ctaaaagcca
     1681 gtaatatctt gctagatgat tatttaaagc caaaaatatc agattttggt atggctaagt
     1741 tatttgggat caacgaatcc gaagcaaata caagcaaagt tgttggaaca cgtggttata
     1801 tgccacccga gtatctaata gatggcattg tttcaaccaa gatcgatgtc tttggttttg
     1861 gtgttctatt gctagagatc gttagcagca aaatgaatcg tgggagctat gatgtcgaac
     1921 acccactcaa ccttctagga cttgcctggg aactgtggaa tgaaggcaga ggtttggagc
     1981 tgatggatcc agtacttgaa gattcatgta ctccaaaaga agtaatgaca tgcattcatg
     2041 ttggtctctt atgtgttcaa gataatgtca tggatagacc gactatgtcc gaagttgtat
     2101 cgatgctcac aaatgaaaat atgcatcttc ctgagccaaa gcgaccagcg ttcttcattg
     2161 agaggtttga tgcagagact ggaagagatg atactcataa taatgtcgga aatgtatccg
     2221 taaatgggca atcaatatcc attttatttg ctagatagat actgcaaaat actactgtac
     2281 cgtactacat tatacctatg aaattatact gaactaataa tgtgtcacta gttcgattat
     2341 aatagttttt agtttgttaa ttca
//
LOCUS       XM_071886551            2289 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase CES101
            (LOC139904623), transcript variant X5, mRNA.
ACCESSION   XM_071886551
VERSION     XM_071886551.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2289
                     /gene="LOC139904623"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904623"
     CDS             51..2183
                     /gene="LOC139904623"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101 isoform X5"
                     /protein_id="XP_071742652.1"
                     /db_xref="GeneID:139904623"
                     /translation="MVSPYLGIFYNKNTYNDNYNNKIRYRDSDESTGMPVWVANRNNP
                     IPDVYGKLIIDAHGKLSILSNGGTVLDLFTPSLVTRNASLTLLDSGNLVLQQLYPNMS
                     VKQVLWQSFDYPTDTLLPGMKLGINLETGHRWSLSSWWSPQLPADGSFTLTIDPNGTD
                     QLVMMWRGNTHWRSGPWVNSEFKNTNLQPSGSDVRVYYVSNATEKLFAYITKTYDSLP
                     VLRMLENDLWATTLTLDTYCLAVNRPPGCVEAEFEKLECRKHYIDEFYYSSGYYIFRY
                     EYVYDESYNLSLYDCKRLCWSNCSCVAYTHANDKCRTFGQIIYNPEEAQHNPYGKYYA
                     FAYYGGGSELSEEERKKKKKSKTLVIGLIIMIVPLALLLLTYLAYAAYKKYDIKGKAK
                     KMKKLALLQMRRLYHYVRTSKNVYVEVHYFTFQSISSATNSFSTTNKLGEGGFGTVYK
                     TSQGKLADGQEVAVKRLSKSSGQGVKEFKNEIELIAKLQHTNLVRLIGCCVEKQEKIL
                     VYEYMPNNSLDFFLFDDYLKPKISDFGMAKLFGINESEANTSKVVGTRGYMPPEYLID
                     GIVSTKIDVFGFGVLLLEIVSSKMNRGSYDVEHPLNLLGLAWELWNEGRGLELMDPVL
                     EDSCTPKEVMTCIHVGLLCVQDNVMDRPTMSEVVSMLTNENMHLPEPKRPAFFIERFD
                     AETGRDDTHNNVGNVSVNGQSISILFAR"
     misc_feature    order(111..113,117..119,123..125,213..215,219..221,
                     225..227,231..233,237..239,309..311,315..317,321..323,
                     327..329,333..335)
                     /gene="LOC139904623"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(120..122,156..161,261..263,267..269,291..293,
                     297..299,303..305,309..338,354..392)
                     /gene="LOC139904623"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    153..467
                     /gene="LOC139904623"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    810..1046
                     /gene="LOC139904623"
                     /note="PAN/APPLE-like domain; present in N-terminal (N)
                     domains of plasminogen/ hepatocyte growth factor proteins,
                     plasma prekallikrein/coagulation factor XI and microneme
                     antigen proteins, plant receptor-like protein kinases, and
                     various nematode and leech...; Region: PAN_APPLE; cl00112"
                     /db_xref="CDD:469620"
     misc_feature    order(870..872,876..878,930..932)
                     /gene="LOC139904623"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238074"
     misc_feature    1368..2039
                     /gene="LOC139904623"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2037..2180
                     /gene="LOC139904623"
                     /note="Domain of unknown function (DUF3403); Region:
                     DUF3403; pfam11883"
                     /db_xref="CDD:463385"
     polyA_site      2289
                     /gene="LOC139904623"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taatttcatc caacaaggtc ttcactctaa agtttttcag ctttggtaca atggtgagcc
       61 cttatttagg gatattttac aacaagaata cgtacaatga caactacaat aacaaaatca
      121 gatatcgtga ttcagacgag tcgactggta tgcctgtttg ggtagcaaac agaaacaatc
      181 ctattccgga tgtatatggc aagctgatca tagatgccca tggaaagctt agcattttat
      241 ctaatggagg cactgttctt gatctattta ctcctagttt ggttacacgt aacgcaagtc
      301 ttacactttt ggattcgggg aatttggtat tacaacaact gtatccaaat atgtcggtta
      361 agcaggtttt atggcaaagc tttgattacc caacagacac acttctaccc gggatgaaac
      421 tgggaattaa tctggagact gggcatagat ggtcactcag ttcttggtgg agcccacagc
      481 taccagccga cgggtcattt acattaacaa tagacccaaa cggcacagat caactagtga
      541 tgatgtggcg cggaaataca cactggagga gtgggccatg ggtgaacagt gaatttaaaa
      601 atactaatct acaaccgtct ggttcagatg ttcgtgtgta ctatgtgtct aacgcgactg
      661 agaaattgtt cgcatatata acgaaaacat atgattcgtt acccgtgcta aggatgcttg
      721 aaaatgatct ttgggctaca actttaacgt tagacacgta ttgcctagca gttaatcggc
      781 ctcctggttg tgttgaagcc gaatttgaga aactagaatg tagaaaacat tatatagatg
      841 aattttatta ttcgtcaggc tattacattt ttcggtatga gtatgtatat gacgaaagct
      901 ataacttgag tttatatgat tgcaaaagat tatgttggag taattgttct tgcgtagctt
      961 atactcatgc caacgacaag tgtaggactt ttggtcaaat aatatataat ccagaagaag
     1021 ctcaacataa cccatacggg aagtattatg ccttcgcgta ctatggaggt ggatcagaac
     1081 tatcagaaga agaaaggaag aaaaagaaga aaagtaagac cttagtaatt gggttgatca
     1141 tcatgattgt acccttagct ctgctcctat taacctatct ggcatatgca gcatacaaga
     1201 agtacgatat taaagggaag gctaaaaaaa tgaaaaagtt ggcgctgctt cagatgagac
     1261 gtctctacca ttacgtacga actagtaaga atgtatatgt tgaagtacat tatttcacct
     1321 ttcaaagcat ctcatctgca acaaacagtt tttcaaccac aaataagctt ggagaaggag
     1381 gctttggaac tgtttataag acttcacagg gtaaattagc tgatgggcaa gaagttgcgg
     1441 tgaaacgact ttcaaaaagc tctggacaag gtgtcaagga atttaagaac gaaatcgaac
     1501 tcattgctaa acttcaacac actaatctag tcagacttat agggtgttgt gttgaaaaac
     1561 aagaaaaaat ccttgtatac gagtacatgc ctaataatag cttggatttc tttctatttg
     1621 atgattattt aaagccaaaa atatcagatt ttggtatggc taagttattt gggatcaacg
     1681 aatccgaagc aaatacaagc aaagttgttg gaacacgtgg ttatatgcca cccgagtatc
     1741 taatagatgg cattgtttca accaagatcg atgtctttgg ttttggtgtt ctattgctag
     1801 agatcgttag cagcaaaatg aatcgtggga gctatgatgt cgaacaccca ctcaaccttc
     1861 taggacttgc ctgggaactg tggaatgaag gcagaggttt ggagctgatg gatccagtac
     1921 ttgaagattc atgtactcca aaagaagtaa tgacatgcat tcatgttggt ctcttatgtg
     1981 ttcaagataa tgtcatggat agaccgacta tgtccgaagt tgtatcgatg ctcacaaatg
     2041 aaaatatgca tcttcctgag ccaaagcgac cagcgttctt cattgagagg tttgatgcag
     2101 agactggaag agatgatact cataataatg tcggaaatgt atccgtaaat gggcaatcaa
     2161 tatccatttt atttgctaga tagatactgc aaaatactac tgtaccgtac tacattatac
     2221 ctatgaaatt atactgaact aataatgtgt cactagttcg attataatag tttttagttt
     2281 gttaattca
//
LOCUS       XM_071886552            2555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase CES101
            (LOC139904623), transcript variant X6, mRNA.
ACCESSION   XM_071886552
VERSION     XM_071886552.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2555
                     /gene="LOC139904623"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139904623"
     CDS             17..2449
                     /gene="LOC139904623"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase CES101 isoform X6"
                     /protein_id="XP_071742653.1"
                     /db_xref="GeneID:139904623"
                     /translation="MANRDILLFLILTVFRNPCYAEIKTSTLQQGQQFKDWDELIMPN
                     KVFTLKFFSFGTMVSPYLGIFYNKNTYNDNYNNKIRYRDSDESTGMPVWVANRNNPIP
                     DVYGKLIIDAHGKLSILSNGGTVLDLFTPSLVTRNASLTLLDSGNLVLQQLYPNMSVK
                     QVLWQSFDYPTDTLLPGMKLGINLETGHRWSLSSWWSPQLPADGSFTLTIDPNGTDQL
                     VMMWRGNTHWRSGPWVNSEFKNTNLQPSGSDVRVYYVSNATEKLFAYITKTYDSLPVL
                     RMLENDLWATTLTLDTYCLAVNRPPGCVEAEFEKLECRKHYIDEFYYSSGYYIFRYEY
                     VYDESYNLSLYDCKRLCWSNCSCVAYTHANDKCRTFGQIIYNPEEAQHNPYGKYYAFA
                     YYGGGSELSEEERKKKKKSKTLVIGLIIMIVPLALLLLTYLAYAAYKKYDIKGKAKKM
                     KKLALLQMRRLYHYVRTSKNVYVEVHYFTFQSISSATNSFSTTNKLGEGGFGTVYKGK
                     LADGQEVAVKRLSKSSGQGVKEFKNEIELIAKLQHTNLVRLIGCCVEKQEKILVYEYM
                     PNNSLDFFLFDPSKKGLLNWNNRFVIIDGIAQGLLYLHKFSRLRVIHRDLKASNILLD
                     DYLKPKISDFGMAKLFGINESEANTSKVVGTRGYMPPEYLIDGIVSTKIDVFGFGVLL
                     LEIVSSKMNRGSYDVEHPLNLLGLAWELWNEGRGLELMDPVLEDSCTPKEVMTCIHVG
                     LLCVQDNVMDRPTMSEVVSMLTNENMHLPEPKRPAFFIERFDAETGRDDTHNNVGNVS
                     VNGQSISILFAR"
     misc_feature    order(185..187,194..196,200..202,206..208,212..214,
                     347..349,353..355,359..361,365..367,371..373,443..445,
                     449..451,455..457,461..463,467..469)
                     /gene="LOC139904623"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(209..211,290..295,395..397,401..403,425..427,
                     431..433,437..439,443..472,488..526)
                     /gene="LOC139904623"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    287..601
                     /gene="LOC139904623"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    944..1180
                     /gene="LOC139904623"
                     /note="PAN/APPLE-like domain; present in N-terminal (N)
                     domains of plasminogen/ hepatocyte growth factor proteins,
                     plasma prekallikrein/coagulation factor XI and microneme
                     antigen proteins, plant receptor-like protein kinases, and
                     various nematode and leech...; Region: PAN_APPLE; cl00112"
                     /db_xref="CDD:469620"
     misc_feature    order(1004..1006,1010..1012,1064..1066)
                     /gene="LOC139904623"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238074"
     misc_feature    1502..2305
                     /gene="LOC139904623"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1502..1516,1526..1528,1562..1564,1568..1570,
                     1655..1657,1703..1714,1724..1726,1730..1732,1859..1861,
                     1865..1867,1871..1876,1880..1882,1913..1915,1922..1924,
                     1976..1987)
                     /gene="LOC139904623"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1502..1516,1526..1528,1562..1564,1568..1570,
                     1655..1657,1703..1714,1724..1726,1859..1861,1865..1867,
                     1871..1876,1880..1882,1913..1915)
                     /gene="LOC139904623"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1514..1516,1724..1726,1730..1732,1859..1861,
                     1865..1867,1871..1873,1922..1924,1976..1987)
                     /gene="LOC139904623"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1910..1933,1964..1987)
                     /gene="LOC139904623"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     misc_feature    2303..2446
                     /gene="LOC139904623"
                     /note="Domain of unknown function (DUF3403); Region:
                     DUF3403; pfam11883"
                     /db_xref="CDD:463385"
     polyA_site      2555
                     /gene="LOC139904623"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctctaccct gaaacaatgg caaacagaga catattactc ttcctcatcc tcactgtatt
       61 ccgaaatcct tgttacgccg aaataaaaac atcaaccttg caacaaggtc aacagttcaa
      121 ggactgggat gaactgatca tgcccaacaa ggtcttcact ctaaagtttt tcagctttgg
      181 tacaatggtg agcccttatt tagggatatt ttacaacaag aatacgtaca atgacaacta
      241 caataacaaa atcagatatc gtgattcaga cgagtcgact ggtatgcctg tttgggtagc
      301 aaacagaaac aatcctattc cggatgtata tggcaagctg atcatagatg cccatggaaa
      361 gcttagcatt ttatctaatg gaggcactgt tcttgatcta tttactccta gtttggttac
      421 acgtaacgca agtcttacac ttttggattc ggggaatttg gtattacaac aactgtatcc
      481 aaatatgtcg gttaagcagg ttttatggca aagctttgat tacccaacag acacacttct
      541 acccgggatg aaactgggaa ttaatctgga gactgggcat agatggtcac tcagttcttg
      601 gtggagccca cagctaccag ccgacgggtc atttacatta acaatagacc caaacggcac
      661 agatcaacta gtgatgatgt ggcgcggaaa tacacactgg aggagtgggc catgggtgaa
      721 cagtgaattt aaaaatacta atctacaacc gtctggttca gatgttcgtg tgtactatgt
      781 gtctaacgcg actgagaaat tgttcgcata tataacgaaa acatatgatt cgttacccgt
      841 gctaaggatg cttgaaaatg atctttgggc tacaacttta acgttagaca cgtattgcct
      901 agcagttaat cggcctcctg gttgtgttga agccgaattt gagaaactag aatgtagaaa
      961 acattatata gatgaatttt attattcgtc aggctattac atttttcggt atgagtatgt
     1021 atatgacgaa agctataact tgagtttata tgattgcaaa agattatgtt ggagtaattg
     1081 ttcttgcgta gcttatactc atgccaacga caagtgtagg acttttggtc aaataatata
     1141 taatccagaa gaagctcaac ataacccata cgggaagtat tatgccttcg cgtactatgg
     1201 aggtggatca gaactatcag aagaagaaag gaagaaaaag aagaaaagta agaccttagt
     1261 aattgggttg atcatcatga ttgtaccctt agctctgctc ctattaacct atctggcata
     1321 tgcagcatac aagaagtacg atattaaagg gaaggctaaa aaaatgaaaa agttggcgct
     1381 gcttcagatg agacgtctct accattacgt acgaactagt aagaatgtat atgttgaagt
     1441 acattatttc acctttcaaa gcatctcatc tgcaacaaac agtttttcaa ccacaaataa
     1501 gcttggagaa ggaggctttg gaactgttta taagggtaaa ttagctgatg ggcaagaagt
     1561 tgcggtgaaa cgactttcaa aaagctctgg acaaggtgtc aaggaattta agaacgaaat
     1621 cgaactcatt gctaaacttc aacacactaa tctagtcaga cttatagggt gttgtgttga
     1681 aaaacaagaa aaaatccttg tatacgagta catgcctaat aatagcttgg atttctttct
     1741 atttgatccc agtaagaaag gattactgaa ttggaataat cgctttgtaa tcattgacgg
     1801 cattgctcaa ggacttctat atctccataa gttttcaagg ttgagggtaa tacatagaga
     1861 tctaaaagcc agtaatatct tgctagatga ttatttaaag ccaaaaatat cagattttgg
     1921 tatggctaag ttatttggga tcaacgaatc cgaagcaaat acaagcaaag ttgttggaac
     1981 acgtggttat atgccacccg agtatctaat agatggcatt gtttcaacca agatcgatgt
     2041 ctttggtttt ggtgttctat tgctagagat cgttagcagc aaaatgaatc gtgggagcta
     2101 tgatgtcgaa cacccactca accttctagg acttgcctgg gaactgtgga atgaaggcag
     2161 aggtttggag ctgatggatc cagtacttga agattcatgt actccaaaag aagtaatgac
     2221 atgcattcat gttggtctct tatgtgttca agataatgtc atggatagac cgactatgtc
     2281 cgaagttgta tcgatgctca caaatgaaaa tatgcatctt cctgagccaa agcgaccagc
     2341 gttcttcatt gagaggtttg atgcagagac tggaagagat gatactcata ataatgtcgg
     2401 aaatgtatcc gtaaatgggc aatcaatatc cattttattt gctagataga tactgcaaaa
     2461 tactactgta ccgtactaca ttatacctat gaaattatac tgaactaata atgtgtcact
     2521 agttcgatta taatagtttt tagtttgtta attca
//
LOCUS       XM_071886553            1568 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine carboxypeptidase-like
            13 (LOC139904624), mRNA.
ACCESSION   XM_071886553
VERSION     XM_071886553.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1568
                     /gene="LOC139904624"
                     /note="serine carboxypeptidase-like 13; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904624"
     CDS             59..1432
                     /gene="LOC139904624"
                     /codon_start=1
                     /product="serine carboxypeptidase-like 13"
                     /protein_id="XP_071742654.1"
                     /db_xref="GeneID:139904624"
                     /translation="MKMTLKHKSLILLLAYVLIVQSYLLKSHSKSIIKRLPGYHGDLP
                     FKLETGYVGVGDKEKVQLFYYFVESTNNSEEDPLIFYIPGGPGASALVTFFLEIGPVS
                     STSDDNNNLTLALNQYAWTQMANIIFIDIPAGTGFSYSETKQGWISSDTNLATLATDF
                     IKKFLMEHPKFKKNPLYIAGISYIGIIVPKITLDLYESNEREDQPKLNIQGYILCSPF
                     TNKFKDFNSRFEYAHRNALISDDIYMSAIKNCQGNYVSTDSANSFCASSLKRYEECTS
                     RITLDNILEPFCDENDPTLDCDNNRYIETWANIDIVQQALHVRQGKIDKWELINQTLH
                     YNQGKNDTFCYSYDIFSSYSYHKKLSTKNCRVLIFSGDQDMTFPYVGVEEWITALNVG
                     VEVPWKPFYVDGQVGGYETKYAENEYSLTFAIVKGAGHLVPLTKPKENIALVQRWFNS
                     QPYVSDY"
     misc_feature    167..1405
                     /gene="LOC139904624"
                     /note="Serine carboxypeptidase; Region: Peptidase_S10;
                     pfam00450"
                     /db_xref="CDD:459815"
ORIGIN      
        1 gcatgcaata catcttggca tattaacaaa ccttaccaaa attgaagcta catatcatat
       61 gaaaatgacg ttgaaacaca aatctttgat tcttttgtta gcttacgttc tcatcgttca
      121 atcttaccta ctaaaatcgc attccaaatc aatcatcaaa agacttccgg gatatcatgg
      181 tgatcttcct ttcaaacttg aaaccggtta tgtaggagta ggtgataagg aaaaggttca
      241 attattttat tattttgttg agtcaacaaa taattcagaa gaagaccctc tcatttttta
      301 tattcctgga ggtcccggag cctctgcatt ggtaaccttc tttcttgaaa taggtccagt
      361 tagctcgaca tcagatgaca ataataatct cacattagcg ttgaatcaat acgcatggac
      421 acagatggct aacatcatat ttattgatat acctgctgga accggctttt cttactccga
      481 aactaaacaa ggatggatta gcagtgatac caatttagct actctagcca cagattttat
      541 caaaaagttt ctcatggaac atcctaagtt taagaagaat ccattataca tagcaggaat
      601 ttcttacatt ggtattattg ttcccaaaat cactctggat ttatatgaaa gtaatgaacg
      661 agaagatcaa ccaaaattaa atattcaagg atacattctt tgtagtcctt tcaccaataa
      721 gttcaaggat ttcaattcta gattcgagta tgctcatcgt aacgcactta tatcagacga
      781 tatctacatg tccgcgataa aaaattgtca aggaaattat gtaagtactg attcggccaa
      841 ttcattttgt gcaagtagcc ttaagaggta tgaagagtgt acaagtcgta ttacgctgga
      901 taacattttg gaaccttttt gtgacgaaaa tgatccaacg ctggattgtg ataataaccg
      961 ctacatagag acatgggcta acattgatat tgtgcaacaa gctctccacg ttcgtcaggg
     1021 aaaaatcgat aaatgggagt tgattaacca aacgttgcat tacaatcaag gaaagaatga
     1081 cacgttttgt tattcgtatg atatatttag tagttattct tatcataaga aactctctac
     1141 caaaaattgt cgagttttga ttttcagtgg tgatcaagat atgacatttc cgtacgttgg
     1201 tgtggaggaa tggataaccg cactgaatgt tggagttgaa gtcccatgga aaccgttcta
     1261 tgttgatggt caagtaggag gatacgaaac aaaatacgca gaaaatgaat attcgttaac
     1321 atttgctata gttaaggggg caggacatct ggttccattg accaagccta aagaaaatat
     1381 tgcattggtg cagaggtggt ttaattcaca accttatgta agcgattatt aacaaatcta
     1441 gcattgtgtg ttacgtcatg atatgtatcc aaaacaagaa atacaatata actattttat
     1501 ctcctgtaat taaagaatct aaagaaaact gtactttgtg aagtcacaac aaatcaattg
     1561 aattctca
//
LOCUS       XM_071886554            1941 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X1, mRNA.
ACCESSION   XM_071886554
VERSION     XM_071886554.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1941
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     CDS             982..1470
                     /gene="LOC139904626"
                     /codon_start=1
                     /product="glutamate dehydrogenase 1-like isoform X1"
                     /protein_id="XP_071742655.1"
                     /db_xref="GeneID:139904626"
                     /translation="MLKHTCRQAEDALSQGSEKLEQLFAQCVPNNITEGRNYDTRMKS
                     VIEGLEALESLSNKDLGGSLGRDAATGRAVLFATEALLNEFGKTINGHRFVIQGFGNV
                     GSWAAKLIHESGGNFLAVSDMSGAIKDDNGLDIPHLLKLLAFQGVSRFPLLNWAIPSG
                     GK"
     misc_feature    <1156..>1401
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase; Region: PLN02477"
                     /db_xref="CDD:178095"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatggta aatatttata
      241 tatatttttg ttgaaccacc tgatgtttac ttttgagtct cagttacagt ttatacttgg
      301 aaaataattt agttagggag ctcataaatt agcaggatcg accgtacttt aagagtttga
      361 tcagccacaa caaggactgc gagacaatat ggataaaata actatctttt caatttggat
      421 aaggcaggtg aacaactata cattatcaac acgctcagga aagaagctca gcacctagac
      481 ttctcccaca tttatcttaa ttaaaagatg gatggatgga tataaagttg tttgtgaggg
      541 cctaaggggg aagcctcgga aataaagttc aggtgacggt ttatctgctt tgttgtgggt
      601 gggtagtcat cgttgactgt tcagtttctc gggtcttgac tataagtggg gactggatca
      661 actgtcttac aaacatattt tcggtcattt aaagatcacc gtcttttaaa ttgtggcatc
      721 tttcaattta cctttgctaa aggagtttgt gacgaagaac ctttcggcca ttataaagca
      781 tggaactcaa cgagagagaa tggtggcttt ctttgatcat gatgaagttg aagttggatc
      841 gagttcggca caaggatctg gatctacagt caaatctgat gccttatcca atattacaac
      901 ctaattttcc tcagattcac agatatccag ttgagcgttt gttccaatgg ctaggtggaa
      961 ttctaccatc acaaattcta tatgttgaaa cacacttgtc gtcaagcaga agatgcattg
     1021 agtcaaggaa gtgaaaaact tgaacaattg tttgctcaat gtgttccgaa taatataacg
     1081 gaaggtagaa actatgacac gcgtatgaag tcggtgattg aggggctcga agcactagaa
     1141 agcctctcga ataaggatct aggtggatct ttgggtagag atgctgcaac gggccgagca
     1201 gtgctctttg caaccgaggc tcttctcaat gaatttggaa aaaccatcaa cggtcaccga
     1261 tttgtcatac aggggtttgg taatgttgga tcatgggctg ccaaacttat tcatgaaagt
     1321 ggtggaaatt ttttggcggt gagtgatatg agcggagcga taaaagacga taatggcctt
     1381 gatattcctc atttgttgaa attactcgct tttcagggag tatcccgctt cccattactc
     1441 aattgggcaa ttcctagtgg aggaaaataa gggagttaaa ggttttgatg atgagaatgc
     1501 gattgatccc gaatctgttt tggttcaaga ttgtgatatt cttattccag ctgcacttgg
     1561 tggcgttatc aacaggtatt tttccatatt ttagcttgag tttcgatacg ttttgttgat
     1621 tgaatttgac atctaaccaa tacattcctg gtatagtatt gtgtgatatc gattcaaagt
     1681 ttataaatcc taattataac atactctgtc tgatcagtga tcagtcgagg aataaacgaa
     1741 taatgccagt taacataagt ttatggatca atgtgttctt taaattacag aaaatggcta
     1801 tttattttgt taacagtcat aattggcaca tgaactgttt actggtctgt taaatatcaa
     1861 aagcatgtac ttattcaaat gggccttgtt gtaattttct tattctttat gtaataagaa
     1921 attgtacaaa ttcttgataa a
//
LOCUS       XR_011778915            2357 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X2, misc_RNA.
ACCESSION   XR_011778915
VERSION     XR_011778915.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2357
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     misc_RNA        1..2357
                     /gene="LOC139904626"
                     /product="glutamate dehydrogenase 1-like, transcript
                     variant X2"
                     /db_xref="GeneID:139904626"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatggta aatatttata
      241 tatatttttg ttgaaccacc tgatgtttac ttttgagtct cagttacagt ttatacttgg
      301 aaaataattt agttagggag ctcataaatt agcaggatcg accgtacttt aagagtttga
      361 tcagccacaa caaggactgc gagacaatat ggataaaata actatctttt caatttggat
      421 aaggcaggtg aacaactata cattatcaac acgctcagga aagaagctca gcacctagac
      481 ttctcccaca tttatcttaa ttaaaagatg gatggatgga tataaagttg tttgtgaggg
      541 cctaaggggg aagcctcgga aataaagttc aggtgacggt ttatctgctt tgttgtgggt
      601 gggtagtcat cgttgactgt tcagtttctc gggtcttgac tataagtggg gactggatca
      661 actgtcttac aaacatattt tcggtcattt aaagatcacc gtcttttaaa ttgtggcatc
      721 tttcaattta cctttgctaa aggagtttgt gacgaagaac ctttcggcca ttataaagca
      781 tggaactcaa cgagagagaa tggtggcttt ctttgatcat gatgaagttg aagttggatc
      841 gagttcggca caaggatctg gatctacagt caaatctgat gccttatcca atattacaac
      901 ctaattttcc tcagattcac agttgagcgt ttgttccaat ggctaggtgg aattctacca
      961 tcacaaattc tatatgttga aacacacttg tcgtcaagca gaagatgcat tgagtcaagg
     1021 aagtgaaaaa cttgaacaat tgtttgctca atgtgttccg aataatataa cggaaggtag
     1081 aaactatgac acgcgtatga agtcggtgat tgaggggctc gaagcactag aaagcctctc
     1141 gaataaggat ctaggtggat ctttgggtag agatgctgca acgggccgag cagtgctctt
     1201 tgcaaccgag gctcttctca atgaatttgg aaaaaccatc aacggtcacc gatttgtcat
     1261 acaggggttt ggtaatgttg gatcatgggc tgccaaactt attcatgaaa gtggtggaaa
     1321 ttttttggcg gtgagtgata tgagcggagc gataaaagac gataatggcc ttgatattcc
     1381 tcatttgttg aaattactcg cttttcaggg agtatcccgc ttcccattac tcaattgggc
     1441 aattcctagt ggaggaaaat aagggagtta aaggttttga tgatgagaat gcgattgatc
     1501 ccgaatctgt tttggttcaa gattgtgata ttcttattcc agctgcactt ggtggcgtta
     1561 tcaacagcaa tacaaaaact ctctggaacg aaatcaaaga gacgacgaag ttgtaggtcg
     1621 gaaagtatat tggagtgcga tgaaaaaata tgaagagtaa ttaacaacta aagtaactaa
     1681 ttaacattag taaaaagaaa gatggaagct ttttggcatg agcaagaaga gagccaactg
     1741 tatcatagct attaccaagt cctgtaatta attgaagaac gaggcggtca tcttcaattt
     1801 gggtccgaca tcgctgagtt gatcggcgat atgtttcatc tcttgacagt aggcggacat
     1861 acttgagaag ttttctagtt tagtgttggc gaatttggta gcaagatgaa cagcacgtga
     1921 atgttgattg tcgtggaaaa ttcctttgat tcggtcccac gtctgttgag ccgtggaatc
     1981 tggagaaaga atattgagca gcaattcgtt tgagagggtt ccatatatcc aagaaagcac
     2041 aattgcatca agtttggccc aatctgtagg attagtttgc tgagttgttg taggtgttga
     2101 agaatatgag tcatctgcgg aagggtgtaa tttggcggca gccattgaag aaatcagaga
     2161 aaagtgataa gagatatgaa ggttaaggag gataataggc ctgataccat aaaagtaagt
     2221 gaattcgtga attctcattc atcagtcaat cgtataaata cagagtccct ataactgagt
     2281 atgagctaat ttaggagatg agctctatct agttgactag ctagtattct gtattctgtt
     2341 actgactaaa tattgtg
//
LOCUS       XM_071886555            1848 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X3, mRNA.
ACCESSION   XM_071886555
VERSION     XM_071886555.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1848
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     CDS             889..1377
                     /gene="LOC139904626"
                     /codon_start=1
                     /product="glutamate dehydrogenase 1-like isoform X1"
                     /protein_id="XP_071742656.1"
                     /db_xref="GeneID:139904626"
                     /translation="MLKHTCRQAEDALSQGSEKLEQLFAQCVPNNITEGRNYDTRMKS
                     VIEGLEALESLSNKDLGGSLGRDAATGRAVLFATEALLNEFGKTINGHRFVIQGFGNV
                     GSWAAKLIHESGGNFLAVSDMSGAIKDDNGLDIPHLLKLLAFQGVSRFPLLNWAIPSG
                     GK"
     misc_feature    <1063..>1308
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase; Region: PLN02477"
                     /db_xref="CDD:178095"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatgtta gggagctcat
      241 aaattagcag gatcgaccgt actttaagag tttgatcagc cacaacaagg actgcgagac
      301 aatatggata aaataactat cttttcaatt tggataaggc aggtgaacaa ctatacatta
      361 tcaacacgct caggaaagaa gctcagcacc tagacttctc ccacatttat cttaattaaa
      421 agatggatgg atggatataa agttgtttgt gagggcctaa gggggaagcc tcggaaataa
      481 agttcaggtg acggtttatc tgctttgttg tgggtgggta gtcatcgttg actgttcagt
      541 ttctcgggtc ttgactataa gtggggactg gatcaactgt cttacaaaca tattttcggt
      601 catttaaaga tcaccgtctt ttaaattgtg gcatctttca atttaccttt gctaaaggag
      661 tttgtgacga agaacctttc ggccattata aagcatggaa ctcaacgaga gagaatggtg
      721 gctttctttg atcatgatga agttgaagtt ggatcgagtt cggcacaagg atctggatct
      781 acagtcaaat ctgatgcctt atccaatatt acaacctaat tttcctcaga ttcacagttg
      841 agcgtttgtt ccaatggcta ggtggaattc taccatcaca aattctatat gttgaaacac
      901 acttgtcgtc aagcagaaga tgcattgagt caaggaagtg aaaaacttga acaattgttt
      961 gctcaatgtg ttccgaataa tataacggaa ggtagaaact atgacacgcg tatgaagtcg
     1021 gtgattgagg ggctcgaagc actagaaagc ctctcgaata aggatctagg tggatctttg
     1081 ggtagagatg ctgcaacggg ccgagcagtg ctctttgcaa ccgaggctct tctcaatgaa
     1141 tttggaaaaa ccatcaacgg tcaccgattt gtcatacagg ggtttggtaa tgttggatca
     1201 tgggctgcca aacttattca tgaaagtggt ggaaattttt tggcggtgag tgatatgagc
     1261 ggagcgataa aagacgataa tggccttgat attcctcatt tgttgaaatt actcgctttt
     1321 cagggagtat cccgcttccc attactcaat tgggcaattc ctagtggagg aaaataaggg
     1381 agttaaaggt tttgatgatg agaatgcgat tgatcccgaa tctgttttgg ttcaagattg
     1441 tgatattctt attccagctg cacttggtgg cgttatcaac aggtattttt ccatatttta
     1501 gcttgagttt cgatacgttt tgttgattga atttgacatc taaccaatac attcctggta
     1561 tagtattgtg tgatatcgat tcaaagttta taaatcctaa ttataacata ctctgtctga
     1621 tcagtgatca gtcgaggaat aaacgaataa tgccagttaa cataagttta tggatcaatg
     1681 tgttctttaa attacagaaa atggctattt attttgttaa cagtcataat tggcacatga
     1741 actgtttact ggtctgttaa atatcaaaag catgtactta ttcaaatggg ccttgttgta
     1801 attttcttat tctttatgta ataagaaatt gtacaaattc ttgataaa
//
LOCUS       XM_071886556            1740 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X4, mRNA.
ACCESSION   XM_071886556
VERSION     XM_071886556.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1740
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     CDS             781..1269
                     /gene="LOC139904626"
                     /codon_start=1
                     /product="glutamate dehydrogenase 1-like isoform X1"
                     /protein_id="XP_071742657.1"
                     /db_xref="GeneID:139904626"
                     /translation="MLKHTCRQAEDALSQGSEKLEQLFAQCVPNNITEGRNYDTRMKS
                     VIEGLEALESLSNKDLGGSLGRDAATGRAVLFATEALLNEFGKTINGHRFVIQGFGNV
                     GSWAAKLIHESGGNFLAVSDMSGAIKDDNGLDIPHLLKLLAFQGVSRFPLLNWAIPSG
                     GK"
     misc_feature    <955..>1200
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase; Region: PLN02477"
                     /db_xref="CDD:178095"
ORIGIN      
        1 ttccaaggta ctttctgaca caaatttgga accagcttgc ggtagttttg gtcacttggt
       61 tgattcgaat catgtgttat ctcaaataag tcaacaaaca aatataatca tttaatatgt
      121 tagggagctc ataaattagc aggatcgacc gtactttaag agtttgatca gccacaacaa
      181 ggactgcgag acaatatgga taaaataact atcttttcaa tttggataag gcaggtgaac
      241 aactatacat tatcaacacg ctcaggaaag aagctcagca cctagacttc tcccacattt
      301 atcttaatta aaagatggat ggatggatat aaagttgttt gtgagggcct aagggggaag
      361 cctcggaaat aaagttcagg tgacggttta tctgctttgt tgtgggtggg tagtcatcgt
      421 tgactgttca gtttctcggg tcttgactat aagtggggac tggatcaact gtcttacaaa
      481 catattttcg gtcatttaaa gatcaccgtc ttttaaattg tggcatcttt caatttacct
      541 ttgctaaagg agtttgtgac gaagaacctt tcggccatta taaagcatgg aactcaacga
      601 gagagaatgg tggctttctt tgatcatgat gaagttgaag ttggatcgag ttcggcacaa
      661 ggatctggat ctacagtcaa atctgatgcc ttatccaata ttacaaccta attttcctca
      721 gattcacagt tgagcgtttg ttccaatggc taggtggaat tctaccatca caaattctat
      781 atgttgaaac acacttgtcg tcaagcagaa gatgcattga gtcaaggaag tgaaaaactt
      841 gaacaattgt ttgctcaatg tgttccgaat aatataacgg aaggtagaaa ctatgacacg
      901 cgtatgaagt cggtgattga ggggctcgaa gcactagaaa gcctctcgaa taaggatcta
      961 ggtggatctt tgggtagaga tgctgcaacg ggccgagcag tgctctttgc aaccgaggct
     1021 cttctcaatg aatttggaaa aaccatcaac ggtcaccgat ttgtcataca ggggtttggt
     1081 aatgttggat catgggctgc caaacttatt catgaaagtg gtggaaattt tttggcggtg
     1141 agtgatatga gcggagcgat aaaagacgat aatggccttg atattcctca tttgttgaaa
     1201 ttactcgctt ttcagggagt atcccgcttc ccattactca attgggcaat tcctagtgga
     1261 ggaaaataag ggagttaaag gttttgatga tgagaatgcg attgatcccg aatctgtttt
     1321 ggttcaagat tgtgatattc ttattccagc tgcacttggt ggcgttatca acaggtattt
     1381 ttccatattt tagcttgagt ttcgatacgt tttgttgatt gaatttgaca tctaaccaat
     1441 acattcctgg tatagtattg tgtgatatcg attcaaagtt tataaatcct aattataaca
     1501 tactctgtct gatcagtgat cagtcgagga ataaacgaat aatgccagtt aacataagtt
     1561 tatggatcaa tgtgttcttt aaattacaga aaatggctat ttattttgtt aacagtcata
     1621 attggcacat gaactgttta ctggtctgtt aaatatcaaa agcatgtact tattcaaatg
     1681 ggccttgttg taattttctt attctttatg taataagaaa ttgtacaaat tcttgataaa
//
LOCUS       XM_071886557            1717 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X5, mRNA.
ACCESSION   XM_071886557
VERSION     XM_071886557.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1717
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     CDS             758..1246
                     /gene="LOC139904626"
                     /codon_start=1
                     /product="glutamate dehydrogenase 1-like isoform X1"
                     /protein_id="XP_071742658.1"
                     /db_xref="GeneID:139904626"
                     /translation="MLKHTCRQAEDALSQGSEKLEQLFAQCVPNNITEGRNYDTRMKS
                     VIEGLEALESLSNKDLGGSLGRDAATGRAVLFATEALLNEFGKTINGHRFVIQGFGNV
                     GSWAAKLIHESGGNFLAVSDMSGAIKDDNGLDIPHLLKLLAFQGVSRFPLLNWAIPSG
                     GK"
     misc_feature    <932..>1177
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase; Region: PLN02477"
                     /db_xref="CDD:178095"
ORIGIN      
        1 ttccaaggta ctttctgaca caaatttgga accagcttgc ggtagttttg gtcacttggt
       61 tgattcgaat catgtgttat ctcaaataag tcaacaaaca aatataatca tttaatatgg
      121 atcgaccgta ctttaagagt ttgatcagcc acaacaagga ctgcgagaca atatggataa
      181 aataactatc ttttcaattt ggataaggca ggtgaacaac tatacattat caacacgctc
      241 aggaaagaag ctcagcacct agacttctcc cacatttatc ttaattaaaa gatggatgga
      301 tggatataaa gttgtttgtg agggcctaag ggggaagcct cggaaataaa gttcaggtga
      361 cggtttatct gctttgttgt gggtgggtag tcatcgttga ctgttcagtt tctcgggtct
      421 tgactataag tggggactgg atcaactgtc ttacaaacat attttcggtc atttaaagat
      481 caccgtcttt taaattgtgg catctttcaa tttacctttg ctaaaggagt ttgtgacgaa
      541 gaacctttcg gccattataa agcatggaac tcaacgagag agaatggtgg ctttctttga
      601 tcatgatgaa gttgaagttg gatcgagttc ggcacaagga tctggatcta cagtcaaatc
      661 tgatgcctta tccaatatta caacctaatt ttcctcagat tcacagttga gcgtttgttc
      721 caatggctag gtggaattct accatcacaa attctatatg ttgaaacaca cttgtcgtca
      781 agcagaagat gcattgagtc aaggaagtga aaaacttgaa caattgtttg ctcaatgtgt
      841 tccgaataat ataacggaag gtagaaacta tgacacgcgt atgaagtcgg tgattgaggg
      901 gctcgaagca ctagaaagcc tctcgaataa ggatctaggt ggatctttgg gtagagatgc
      961 tgcaacgggc cgagcagtgc tctttgcaac cgaggctctt ctcaatgaat ttggaaaaac
     1021 catcaacggt caccgatttg tcatacaggg gtttggtaat gttggatcat gggctgccaa
     1081 acttattcat gaaagtggtg gaaatttttt ggcggtgagt gatatgagcg gagcgataaa
     1141 agacgataat ggccttgata ttcctcattt gttgaaatta ctcgcttttc agggagtatc
     1201 ccgcttccca ttactcaatt gggcaattcc tagtggagga aaataaggga gttaaaggtt
     1261 ttgatgatga gaatgcgatt gatcccgaat ctgttttggt tcaagattgt gatattctta
     1321 ttccagctgc acttggtggc gttatcaaca ggtatttttc catattttag cttgagtttc
     1381 gatacgtttt gttgattgaa tttgacatct aaccaataca ttcctggtat agtattgtgt
     1441 gatatcgatt caaagtttat aaatcctaat tataacatac tctgtctgat cagtgatcag
     1501 tcgaggaata aacgaataat gccagttaac ataagtttat ggatcaatgt gttctttaaa
     1561 ttacagaaaa tggctattta ttttgttaac agtcataatt ggcacatgaa ctgtttactg
     1621 gtctgttaaa tatcaaaagc atgtacttat tcaaatgggc cttgttgtaa ttttcttatt
     1681 ctttatgtaa taagaaattg tacaaattct tgataaa
//
LOCUS       XM_071886559            1720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X6, mRNA.
ACCESSION   XM_071886559
VERSION     XM_071886559.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1720
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     CDS             761..1249
                     /gene="LOC139904626"
                     /codon_start=1
                     /product="glutamate dehydrogenase 1-like isoform X1"
                     /protein_id="XP_071742660.1"
                     /db_xref="GeneID:139904626"
                     /translation="MLKHTCRQAEDALSQGSEKLEQLFAQCVPNNITEGRNYDTRMKS
                     VIEGLEALESLSNKDLGGSLGRDAATGRAVLFATEALLNEFGKTINGHRFVIQGFGNV
                     GSWAAKLIHESGGNFLAVSDMSGAIKDDNGLDIPHLLKLLAFQGVSRFPLLNWAIPSG
                     GK"
     misc_feature    <935..>1180
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase; Region: PLN02477"
                     /db_xref="CDD:178095"
ORIGIN      
        1 ttccaaggta ctttctgaca caaatttgga accagcttgc ggtagttttg gtcacttggt
       61 tgattcgaat catgtgttat ctcaaataag tcaacaaaca aatataatca tttaatatgc
      121 aggatcgacc gtactttaag agtttgatca gccacaacaa ggactgcgag acaatatgga
      181 taaaataact atcttttcaa tttggataag gcaggtgaac aactatacat tatcaacacg
      241 ctcaggaaag aagctcagca cctagacttc tcccacattt atcttaatta aaagatggat
      301 ggatggatat aaagttgttt gtgagggcct aagggggaag cctcggaaat aaagttcagg
      361 tgacggttta tctgctttgt tgtgggtggg tagtcatcgt tgactgttca gtttctcggg
      421 tcttgactat aagtggggac tggatcaact gtcttacaaa catattttcg gtcatttaaa
      481 gatcaccgtc ttttaaattg tggcatcttt caatttacct ttgctaaagg agtttgtgac
      541 gaagaacctt tcggccatta taaagcatgg aactcaacga gagagaatgg tggctttctt
      601 tgatcatgat gaagttgaag ttggatcgag ttcggcacaa ggatctggat ctacagtcaa
      661 atctgatgcc ttatccaata ttacaaccta attttcctca gattcacagt tgagcgtttg
      721 ttccaatggc taggtggaat tctaccatca caaattctat atgttgaaac acacttgtcg
      781 tcaagcagaa gatgcattga gtcaaggaag tgaaaaactt gaacaattgt ttgctcaatg
      841 tgttccgaat aatataacgg aaggtagaaa ctatgacacg cgtatgaagt cggtgattga
      901 ggggctcgaa gcactagaaa gcctctcgaa taaggatcta ggtggatctt tgggtagaga
      961 tgctgcaacg ggccgagcag tgctctttgc aaccgaggct cttctcaatg aatttggaaa
     1021 aaccatcaac ggtcaccgat ttgtcataca ggggtttggt aatgttggat catgggctgc
     1081 caaacttatt catgaaagtg gtggaaattt tttggcggtg agtgatatga gcggagcgat
     1141 aaaagacgat aatggccttg atattcctca tttgttgaaa ttactcgctt ttcagggagt
     1201 atcccgcttc ccattactca attgggcaat tcctagtgga ggaaaataag ggagttaaag
     1261 gttttgatga tgagaatgcg attgatcccg aatctgtttt ggttcaagat tgtgatattc
     1321 ttattccagc tgcacttggt ggcgttatca acaggtattt ttccatattt tagcttgagt
     1381 ttcgatacgt tttgttgatt gaatttgaca tctaaccaat acattcctgg tatagtattg
     1441 tgtgatatcg attcaaagtt tataaatcct aattataaca tactctgtct gatcagtgat
     1501 cagtcgagga ataaacgaat aatgccagtt aacataagtt tatggatcaa tgtgttcttt
     1561 aaattacaga aaatggctat ttattttgtt aacagtcata attggcacat gaactgttta
     1621 ctggtctgtt aaatatcaaa agcatgtact tattcaaatg ggccttgttg taattttctt
     1681 attctttatg taataagaaa ttgtacaaat tcttgataaa
//
LOCUS       XM_071886560            1855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X7, mRNA.
ACCESSION   XM_071886560
VERSION     XM_071886560.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1855
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     CDS             974..1384
                     /gene="LOC139904626"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742661.1"
                     /db_xref="GeneID:139904626"
                     /translation="MLKHTCRQAEDALSQGSEKLEQLFAQCVPNNITEGRNYDTRMKS
                     VIEGLEALESLSNKDLGGSLGRDAATGRAVLFATEALLNEFGKTINGHRFVIQGFGNV
                     GSWAAKLIHESGGNFLAGVSRFPLLNWAIPSGGK"
     misc_feature    <1148..>1330
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase; Region: PLN02477"
                     /db_xref="CDD:178095"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatggta aatatttata
      241 tatatttttg ttgaaccacc tgatgtttac ttttgagtct cagttacagt ttatacttgg
      301 aaaataattt agttagggag ctcataaatt agcaggatcg accgtacttt aagagtttga
      361 tcagccacaa caaggactgc gagacaatat ggataaaata actatctttt caatttggat
      421 aaggcaggtg aacaactata cattatcaac acgctcagga aagaagctca gcacctagac
      481 ttctcccaca tttatcttaa ttaaaagatg gatggatgga tataaagttg tttgtgaggg
      541 cctaaggggg aagcctcgga aataaagttc aggtgacggt ttatctgctt tgttgtgggt
      601 gggtagtcat cgttgactgt tcagtttctc gggtcttgac tataagtggg gactggatca
      661 actgtcttac aaacatattt tcggtcattt aaagatcacc gtcttttaaa ttgtggcatc
      721 tttcaattta cctttgctaa aggagtttgt gacgaagaac ctttcggcca ttataaagca
      781 tggaactcaa cgagagagaa tggtggcttt ctttgatcat gatgaagttg aagttggatc
      841 gagttcggca caaggatctg gatctacagt caaatctgat gccttatcca atattacaac
      901 ctaattttcc tcagattcac agttgagcgt ttgttccaat ggctaggtgg aattctacca
      961 tcacaaattc tatatgttga aacacacttg tcgtcaagca gaagatgcat tgagtcaagg
     1021 aagtgaaaaa cttgaacaat tgtttgctca atgtgttccg aataatataa cggaaggtag
     1081 aaactatgac acgcgtatga agtcggtgat tgaggggctc gaagcactag aaagcctctc
     1141 gaataaggat ctaggtggat ctttgggtag agatgctgca acgggccgag cagtgctctt
     1201 tgcaaccgag gctcttctca atgaatttgg aaaaaccatc aacggtcacc gatttgtcat
     1261 acaggggttt ggtaatgttg gatcatgggc tgccaaactt attcatgaaa gtggtggaaa
     1321 ttttttggcg ggagtatccc gcttcccatt actcaattgg gcaattccta gtggaggaaa
     1381 ataagggagt taaaggtttt gatgatgaga atgcgattga tcccgaatct gttttggttc
     1441 aagattgtga tattcttatt ccagctgcac ttggtggcgt tatcaacagg tatttttcca
     1501 tattttagct tgagtttcga tacgttttgt tgattgaatt tgacatctaa ccaatacatt
     1561 cctggtatag tattgtgtga tatcgattca aagtttataa atcctaatta taacatactc
     1621 tgtctgatca gtgatcagtc gaggaataaa cgaataatgc cagttaacat aagtttatgg
     1681 atcaatgtgt tctttaaatt acagaaaatg gctatttatt ttgttaacag tcataattgg
     1741 cacatgaact gtttactggt ctgttaaata tcaaaagcat gtacttattc aaatgggcct
     1801 tgttgtaatt ttcttattct ttatgtaata agaaattgta caaattcttg ataaa
//
LOCUS       XM_071886561            1980 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X8, mRNA.
ACCESSION   XM_071886561
VERSION     XM_071886561.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1980
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     CDS             1144..1509
                     /gene="LOC139904626"
                     /codon_start=1
                     /product="glutamate dehydrogenase 1-like isoform X3"
                     /protein_id="XP_071742662.1"
                     /db_xref="GeneID:139904626"
                     /translation="MKSVIEGLEALESLSNKDLGGSLGRDAATGRAVLFATEALLNEF
                     GKTINGHRFVIQGFGNVGSWAAKLIHESGGNFLAVSDMSGAIKDDNGLDIPHLLKLLA
                     FQGVSRFPLLNWAIPSGGK"
     misc_feature    <1195..>1440
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase; Region: PLN02477"
                     /db_xref="CDD:178095"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatggta aatatttata
      241 tatatttttg ttgaaccacc tgatgtttac ttttgagtct cagttacagt ttatacttgg
      301 aaaataattt agttagggag ctcataaatt agcaggatcg accgtacttt aagagtttga
      361 tcagccacaa caaggactgc gagacaatat ggataaaata actatctttt caatttggat
      421 aaggcaggtg aacaactata cattatcaac acgctcagga aagaagctca gcacctagac
      481 ttctcccaca tttatcttaa ttaaaagatg gatggatgga tataaagttg tttgtgaggg
      541 cctaaggggg aagcctcgga aataaagttc aggtgacggt ttatctgctt tgttgtgggt
      601 gggtagtcat cgttgactgt tcagtttctc gggtcttgac tataagtggg gactggatca
      661 actgtcttac aaacatattt tcggtcattt aaagatcacc gtcttttaaa ttgtggcatc
      721 tttcaattta cctttgctaa aggagtttgt gacgaagaac ctttcggcca ttataaagca
      781 tggaactcaa cgagagagaa tggtggcttt ctttgatcat gatgaagttg aagttggatc
      841 gagttcggca caaggatctg gatctacagt caaatctgat gccttatcca atattacaac
      901 ctaattttcc tcagattcac agatatccag ttgagcgttt gttccaatgg ctaggtggaa
      961 ttctaccatc acaaattcta tatatactta tgccaatatt tgagccttta acgaatacac
     1021 aggttgaaac acacttgtcg tcaagcagaa gatgcattga gtcaaggaag tgaaaaactt
     1081 gaacaattgt ttgctcaatg tgttccgaat aatataacgg aaggtagaaa ctatgacacg
     1141 cgtatgaagt cggtgattga ggggctcgaa gcactagaaa gcctctcgaa taaggatcta
     1201 ggtggatctt tgggtagaga tgctgcaacg ggccgagcag tgctctttgc aaccgaggct
     1261 cttctcaatg aatttggaaa aaccatcaac ggtcaccgat ttgtcataca ggggtttggt
     1321 aatgttggat catgggctgc caaacttatt catgaaagtg gtggaaattt tttggcggtg
     1381 agtgatatga gcggagcgat aaaagacgat aatggccttg atattcctca tttgttgaaa
     1441 ttactcgctt ttcagggagt atcccgcttc ccattactca attgggcaat tcctagtgga
     1501 ggaaaataag ggagttaaag gttttgatga tgagaatgcg attgatcccg aatctgtttt
     1561 ggttcaagat tgtgatattc ttattccagc tgcacttggt ggcgttatca acaggtattt
     1621 ttccatattt tagcttgagt ttcgatacgt tttgttgatt gaatttgaca tctaaccaat
     1681 acattcctgg tatagtattg tgtgatatcg attcaaagtt tataaatcct aattataaca
     1741 tactctgtct gatcagtgat cagtcgagga ataaacgaat aatgccagtt aacataagtt
     1801 tatggatcaa tgtgttcttt aaattacaga aaatggctat ttattttgtt aacagtcata
     1861 attggcacat gaactgttta ctggtctgtt aaatatcaaa agcatgtact tattcaaatg
     1921 ggccttgttg taattttctt attctttatg taataagaaa ttgtacaaat tcttgataaa
//
LOCUS       XR_011778916            2425 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X9, misc_RNA.
ACCESSION   XR_011778916
VERSION     XR_011778916.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2425
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     misc_RNA        1..2425
                     /gene="LOC139904626"
                     /product="glutamate dehydrogenase 1-like, transcript
                     variant X9"
                     /db_xref="GeneID:139904626"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatggta aatatttata
      241 tatatttttg ttgaaccacc tgatgtttac ttttgagtct cagttacagt ttatacttgg
      301 aaaataattt agttagggag ctcataaatt agcaggatcg accgtacttt aagagtttga
      361 tcagccacaa caaggactgc gagacaatat ggataaaata actatctttt caatttggat
      421 aaggcaggtg aacaactata cattatcaac acgctcagga aagaagctca gcacctagac
      481 ttctcccaca tttatcttaa ttaaaagatg gatggatgga tataaagttg tttgtgaggg
      541 cctaaggggg aagcctcgga aataaagttc aggtgacggt ttatctgctt tgttgtgggt
      601 gggtagtcat cgttgactgt tcagtttctc gggtcttgac tataagtggg gactggatca
      661 actgtcttac aaacatattt tcggtcattt aaagatcacc gtcttttaaa ttgtggcatc
      721 tttcaattta cctttgctaa aggagtttgt gacgaagaac ctttcggcca ttataaagca
      781 tggaactcaa cgagagagaa tggtggcttt ctttgatcat gatgaagttg aagttggatc
      841 gagttcggca caaggatctg gatctacagt caaatctgat gccttatcca atattacaac
      901 ctaattttcc tcagattcac agttgagcgt ttgttccaat ggctaggtgg aattctacca
      961 tcacaaattc tatatatact tatgccaata tttgagcctt taacgaatac acaggttgaa
     1021 acacacttgt cgtcaagcag aagatgcatt gagtcaagga agtgaaaaac ttgaacaatt
     1081 gtttgctcaa tgtgttccga ataatataac ggaaggtaga aactatgaca cgcgtatgaa
     1141 gtcggtgatt gaggggctcg aagcactaga aagcctctcg aataaggaaa tccaagaaga
     1201 atggtacgtg atcggtagca ttaccctttt ttgttggcac ctcaaattaa attgtaacgt
     1261 ggtagaatca tgtggccata catacgtgtc aaggatctag gtggatcttt gggtagagat
     1321 gctgcaacgg gccgagcagt gctctttgca accgaggctc ttctcaatga atttggaaaa
     1381 accatcaacg gtcaccgatt tgtcatacag gggtttggta atgttggatc atgggctgcc
     1441 aaacttattc atgaaagtgg tggaaatttt ttggcgggag tatcccgctt cccattactc
     1501 aattgggcaa ttcctagtgg aggaaaataa gggagttaaa ggttttgatg atgagaatgc
     1561 gattgatccc gaatctgttt tggttcaaga ttgtgatatt cttattccag ctgcacttgg
     1621 tggcgttatc aacagcaata caaaaactct ctggaacgaa atcaaagaga cgacgaagtt
     1681 gtaggtcgga aagtatattg gagtgcgatg aaaaaatatg aagagtaatt aacaactaaa
     1741 gtaactaatt aacattagta aaaagaaaga tggaagcttt ttggcatgag caagaagaga
     1801 gccaactgta tcatagctat taccaagtcc tgtaattaat tgaagaacga ggcggtcatc
     1861 ttcaatttgg gtccgacatc gctgagttga tcggcgatat gtttcatctc ttgacagtag
     1921 gcggacatac ttgagaagtt ttctagttta gtgttggcga atttggtagc aagatgaaca
     1981 gcacgtgaat gttgattgtc gtggaaaatt cctttgattc ggtcccacgt ctgttgagcc
     2041 gtggaatctg gagaaagaat attgagcagc aattcgtttg agagggttcc atatatccaa
     2101 gaaagcacaa ttgcatcaag tttggcccaa tctgtaggat tagtttgctg agttgttgta
     2161 ggtgttgaag aatatgagtc atctgcggaa gggtgtaatt tggcggcagc cattgaagaa
     2221 atcagagaaa agtgataaga gatatgaagg ttaaggagga taataggcct gataccataa
     2281 aagtaagtga attcgtgaat tctcattcat cagtcaatcg tataaataca gagtccctat
     2341 aactgagtat gagctaattt aggagatgag ctctatctag ttgactagct agtattctgt
     2401 attctgttac tgactaaata ttgtg
//
LOCUS       XR_011778917            2335 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X10, misc_RNA.
ACCESSION   XR_011778917
VERSION     XR_011778917.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2335
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     misc_RNA        1..2335
                     /gene="LOC139904626"
                     /product="glutamate dehydrogenase 1-like, transcript
                     variant X10"
                     /db_xref="GeneID:139904626"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatggta aatatttata
      241 tatatttttg ttgaaccacc tgatgtttac ttttgagtct cagttacagt ttatacttgg
      301 aaaataattt agttagggag ctcataaatt agcaggatcg accgtacttt aagagtttga
      361 tcagccacaa caaggactgc gagacaatat ggataaaata actatctttt caatttggat
      421 aaggcaggtg aacaactata cattatcaac acgctcagga aagaagctca gcacctagac
      481 ttctcccaca tttatcttaa ttaaaagatg gatggatgga tataaagttg tttgtgaggg
      541 cctaaggggg aagcctcgga aataaagttc aggtgacggt ttatctgctt tgttgtgggt
      601 gggtagtcat cgttgactgt tcagtttctc gggtcttgac tataagtggg gactggatca
      661 actgtcttac aaacatattt tcggtcattt aaagatcacc gtcttttaaa ttgtggcatc
      721 tttcaattta cctttgctaa aggagtttgt gacgaagaac ctttcggcca ttataaagca
      781 tggaactcaa cgagagagaa tggtggcttt ctttgatcat gatgaagttg aagttggatc
      841 gagttcggca caaggatctg gatctacagt caaatctgat gccttatcca atattacaac
      901 ctaattttcc tcagattcac agttgagcgt ttgttccaat ggctaggtgg aattctacca
      961 tcacaaattc tatatatact tatgccaata tttgagcctt taacgaatac acaggttgaa
     1021 acacacttgt cgtcaagcag aagatgcatt gagtcaagga agtgaaaaac ttgaacaatt
     1081 gtttgctcaa tgtgttccga ataatataac ggaaggtaga aactatgaca cgcgtatgaa
     1141 gtcggtgatt gaggggctcg aagcactaga aagcctctcg aataaggaaa tccaagaaga
     1201 atggatctag gtggatcttt gggtagagat gctgcaacgg gccgagcagt gctctttgca
     1261 accgaggctc ttctcaatga atttggaaaa accatcaacg gtcaccgatt tgtcatacag
     1321 gggtttggta atgttggatc atgggctgcc aaacttattc atgaaagtgg tggaaatttt
     1381 ttggcgggag tatcccgctt cccattactc aattgggcaa ttcctagtgg aggaaaataa
     1441 gggagttaaa ggttttgatg atgagaatgc gattgatccc gaatctgttt tggttcaaga
     1501 ttgtgatatt cttattccag ctgcacttgg tggcgttatc aacagcaata caaaaactct
     1561 ctggaacgaa atcaaagaga cgacgaagtt gtaggtcgga aagtatattg gagtgcgatg
     1621 aaaaaatatg aagagtaatt aacaactaaa gtaactaatt aacattagta aaaagaaaga
     1681 tggaagcttt ttggcatgag caagaagaga gccaactgta tcatagctat taccaagtcc
     1741 tgtaattaat tgaagaacga ggcggtcatc ttcaatttgg gtccgacatc gctgagttga
     1801 tcggcgatat gtttcatctc ttgacagtag gcggacatac ttgagaagtt ttctagttta
     1861 gtgttggcga atttggtagc aagatgaaca gcacgtgaat gttgattgtc gtggaaaatt
     1921 cctttgattc ggtcccacgt ctgttgagcc gtggaatctg gagaaagaat attgagcagc
     1981 aattcgtttg agagggttcc atatatccaa gaaagcacaa ttgcatcaag tttggcccaa
     2041 tctgtaggat tagtttgctg agttgttgta ggtgttgaag aatatgagtc atctgcggaa
     2101 gggtgtaatt tggcggcagc cattgaagaa atcagagaaa agtgataaga gatatgaagg
     2161 ttaaggagga taataggcct gataccataa aagtaagtga attcgtgaat tctcattcat
     2221 cagtcaatcg tataaataca gagtccctat aactgagtat gagctaattt aggagatgag
     2281 ctctatctag ttgactagct agtattctgt attctgttac tgactaaata ttgtg
//
LOCUS       XR_011778918            2318 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X11, misc_RNA.
ACCESSION   XR_011778918
VERSION     XR_011778918.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2318
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     misc_RNA        1..2318
                     /gene="LOC139904626"
                     /product="glutamate dehydrogenase 1-like, transcript
                     variant X11"
                     /db_xref="GeneID:139904626"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatggta aatatttata
      241 tatatttttg ttgaaccacc tgatgtttac ttttgagtct cagttacagt ttatacttgg
      301 aaaataattt agttagggag ctcataaatt agcaggatcg accgtacttt aagagtttga
      361 tcagccacaa caaggactgc gagacaatat ggataaaata actatctttt caatttggat
      421 aaggcaggtg aacaactata cattatcaac acgctcagga aagaagctca gcacctagac
      481 ttctcccaca tttatcttaa ttaaaagatg gatggatgga tataaagttg tttgtgaggg
      541 cctaaggggg aagcctcgga aataaagttc aggtgacggt ttatctgctt tgttgtgggt
      601 gggtagtcat cgttgactgt tcagtttctc gggtcttgac tataagtggg gactggatca
      661 actgtcttac aaacatattt tcggtcattt aaagatcacc gtcttttaaa ttgtggcatc
      721 tttcaattta cctttgctaa aggagtttgt gacgaagaac ctttcggcca ttataaagca
      781 tggaactcaa cgagagagaa tggtggcttt ctttgatcat gatgaagttg aagttggatc
      841 gagttcggca caaggatctg gatctacagt caaatctgat gccttatcca atattacaac
      901 ctaattttcc tcagattcac agttgagcgt ttgttccaat ggctaggtgg aattctacca
      961 tcacaaattc tatatatact tatgccaata tttgagcctt taacgaatac acaggttgaa
     1021 acacacttgt cgtcaagcag aagatgcatt gagtcaagga agtgaaaaac ttgaacaatt
     1081 gtttgctcaa tgtgttccga ataatataac ggaaggtaga aactatgaca cgcgtatgaa
     1141 gtcggtgatt gaggggctcg aagcactaga aagcctctcg aataaggatc taggtggatc
     1201 tttgggtaga gatgctgcaa cgggccgagc agtgctcttt gcaaccgagg ctcttctcaa
     1261 tgaatttgga aaaaccatca acggtcaccg atttgtcata caggggtttg gtaatgttgg
     1321 atcatgggct gccaaactta ttcatgaaag tggtggaaat tttttggcgg gagtatcccg
     1381 cttcccatta ctcaattggg caattcctag tggaggaaaa taagggagtt aaaggttttg
     1441 atgatgagaa tgcgattgat cccgaatctg ttttggttca agattgtgat attcttattc
     1501 cagctgcact tggtggcgtt atcaacagca atacaaaaac tctctggaac gaaatcaaag
     1561 agacgacgaa gttgtaggtc ggaaagtata ttggagtgcg atgaaaaaat atgaagagta
     1621 attaacaact aaagtaacta attaacatta gtaaaaagaa agatggaagc tttttggcat
     1681 gagcaagaag agagccaact gtatcatagc tattaccaag tcctgtaatt aattgaagaa
     1741 cgaggcggtc atcttcaatt tgggtccgac atcgctgagt tgatcggcga tatgtttcat
     1801 ctcttgacag taggcggaca tacttgagaa gttttctagt ttagtgttgg cgaatttggt
     1861 agcaagatga acagcacgtg aatgttgatt gtcgtggaaa attcctttga ttcggtccca
     1921 cgtctgttga gccgtggaat ctggagaaag aatattgagc agcaattcgt ttgagagggt
     1981 tccatatatc caagaaagca caattgcatc aagtttggcc caatctgtag gattagtttg
     2041 ctgagttgtt gtaggtgttg aagaatatga gtcatctgcg gaagggtgta atttggcggc
     2101 agccattgaa gaaatcagag aaaagtgata agagatatga aggttaagga ggataatagg
     2161 cctgatacca taaaagtaag tgaattcgtg aattctcatt catcagtcaa tcgtataaat
     2221 acagagtccc tataactgag tatgagctaa tttaggagat gagctctatc tagttgacta
     2281 gctagtattc tgtattctgt tactgactaa atattgtg
//
LOCUS       XR_011778919            2087 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate dehydrogenase
            1-like (LOC139904626), transcript variant X12, misc_RNA.
ACCESSION   XR_011778919
VERSION     XR_011778919.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2087
                     /gene="LOC139904626"
                     /note="glutamate dehydrogenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904626"
     misc_RNA        1..2087
                     /gene="LOC139904626"
                     /product="glutamate dehydrogenase 1-like, transcript
                     variant X12"
                     /db_xref="GeneID:139904626"
ORIGIN      
        1 ggtactttct gacacaaatt tggaaccagc ttggtaagca tcaagttctg ctatgttccc
       61 attataaatt cgagctcatt tcagtttctt ttgataggct cacgatatga tatactctaa
      121 tgctcataat cagttttttt ggaacagcgg tagttttggt cacttggttg attcgaatca
      181 tgtgttatct caaataagtc aacaaacaaa tataatcatt taatatggta aatatttata
      241 tatatttttg ttgaaccacc tgatgtttac ttttgagtct cagttacagt ttatacttgg
      301 aaaataattt agttagggag ctcataaatt agcaggatcg accgtacttt aagagtttga
      361 tcagccacaa caaggactgc gagacaatat ggataaaata actatctttt caatttggat
      421 aaggcaggtg aacaactata cattatcaac acgctcagga aagaagctca gcacctagac
      481 ttctcccaca tttatcttaa ttaaaagatg gatggatgga tataaagttg tttgtgaggg
      541 cctaaggggg aagcctcgga aataaagttc aggtgacggt ttatctgctt tgttgtgggt
      601 gggtagtcat cgttgactgt tcagtttctc gggtcttgac tataagtggg gactggatca
      661 actgtcttac aaacatattt tcggtcattt aaagatcacc gtcttttaaa ttgtggcatc
      721 tttcaattta cctttgctaa aggagtttgt gacgaagaac ctttcggcca ttataaagca
      781 tggaactcaa cgagagagaa tggtggcttt ctttgatcat gatgaagttg aagttggatc
      841 gagttcggca caaggatctg gatctacagt caaatctgat gccttatcca atattacaac
      901 ctaattttcc tcagattcac agatatccag ttgagcgttt gttccaatgg ctaggtggaa
      961 ttctaccatc acaaattcta tatatactta tgccaatatt tgagccttta acgaatacac
     1021 aggttgaaac acacttgtcg tcaagcagaa gatgcattga gtcaaggaag tgaaaaactt
     1081 gaacaattgt ttgctcaatg tgttccgaat aatataacgg aaggtagaaa ctatgacacg
     1141 cgtatgaagt cggtgattga ggggctcgaa gcactagaaa gcctctcgaa taaggaaatc
     1201 caagaagaat ggtacgtgat cggtagcatt accctttttt gttggcacct caaattaaat
     1261 tgtaacgtgg tagaatcatg tggccataca tacgtgtcaa ggatctaggt ggatctttgg
     1321 gtagagatgc tgcaacgggc cgagcagtgc tctttgcaac cgaggctctt ctcaatgaat
     1381 ttggaaaaac catcaacggt caccgatttg tcatacaggg gtttggtaat gttggatcat
     1441 gggctgccaa acttattcat gaaagtggtg gaaatttttt ggcggtgagt gatatgagcg
     1501 gagcgataaa agacgataat ggccttgata ttcctcattt gttgaaatta ctcgcttttc
     1561 agggagtatc ccgcttccca ttactcaatt gggcaattcc tagtggagga aaataaggga
     1621 gttaaaggtt ttgatgatga gaatgcgatt gatcccgaat ctgttttggt tcaagattgt
     1681 gatattctta ttccagctgc acttggtggc gttatcaaca ggtatttttc catattttag
     1741 cttgagtttc gatacgtttt gttgattgaa tttgacatct aaccaataca ttcctggtat
     1801 agtattgtgt gatatcgatt caaagtttat aaatcctaat tataacatac tctgtctgat
     1861 cagtgatcag tcgaggaata aacgaataat gccagttaac ataagtttat ggatcaatgt
     1921 gttctttaaa ttacagaaaa tggctattta ttttgttaac agtcataatt ggcacatgaa
     1981 ctgtttactg gtctgttaaa tatcaaaagc atgtacttat tcaaatgggc cttgttgtaa
     2041 ttttcttatt ctttatgtaa taagaaattg tacaaattct tgataaa
//
LOCUS       XM_071886562            2472 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904627), transcript variant X1, mRNA.
ACCESSION   XM_071886562
VERSION     XM_071886562.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2472
                     /gene="LOC139904627"
                     /note="uncharacterized LOC139904627; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904627"
     CDS             168..2333
                     /gene="LOC139904627"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742663.1"
                     /db_xref="GeneID:139904627"
                     /translation="MELIESIDDIELQNPSAEYFSAADLKWVKFGTPEDHDDVALIPY
                     ARVEDFRNGEGSKVESPTQFHIRRGRKREKDLQEYRDDEYLEYRQYWCSFGPDDYGES
                     GIVLPSQKFRLNTRNRAPRPQSMRGCQCHWVVKRLYARPSLVLLVYNENDRRHVNKSG
                     YICHGPLDRDAIGPGAKKIPYVGNEIQQQTMSMIYLGIPEENVLEKHIEGIQRYCGSD
                     AKVNAIASQYVHKLGMIIKKSTHELDLDDQESIRIWADRNKKSIFYNQKSSENEPFIL
                     GIQTEWQLQQMIRFGHRSLIAIDSTFGIKRLKYPLCTLLVFDSRQHALPVAWVITRSV
                     AKSDMCKWMKALLGRVHAVDPTWKATGFLIDDAAAETDPIRETFTCPILFSVWRIRRS
                     WLRHIVKKCRNVEVQREIFKRLGDIVYSIWGGVDPFLVLQKFSQDFVDQTDFMQYFTA
                     SWVPKIEMWLTIMKTLPLASQEASGAIEAYHVKLKLKLFDDSHLGALKRVDWLVHKLT
                     TELHSSYWLDRYSDETDSFQIVKQEYINSTSWYRALQIPDTDVTLDNINNSFAKVVSQ
                     NDRNKSHLIWNPGSEFAFCDCEWSLRGNLCKHVVKVNMICENHPTYQSSISFQSYQEI
                     LTNMLKKPPDDSLELDLSTAWLHQINDQIQKLVELNRSIDISTVVHNLPLKWCDKKNR
                     TLPSTPATARLSTGAVSTSNRNIVAYRRNRKRKRLSSIR"
     misc_feature    1890..1973
                     /gene="LOC139904627"
                     /note="SWIM zinc finger; Region: SWIM; pfam04434"
                     /db_xref="CDD:309540"
ORIGIN      
        1 aactaactaa aaccccattt cccaatcata aaccctcgcc tctctcacta ctattttcca
       61 ccgtctctca ttacccttta acctacagct acaacagagc ctgcaaaacg acgtcgtaat
      121 ccaactatac atcatcctca cccattttct tacgagttat attgcatatg gagttgattg
      181 aatcaataga tgatatcgag ttacaaaatc cttcagcaga atatttctca gctgcagacc
      241 taaaatgggt caaatttggc actccagaag atcatgatga tgtggcccta attccttatg
      301 caagagttga agatttcaga aatggagaag gttctaaagt agaatcacca acccagttcc
      361 acattaggag aggaaggaaa cgtgagaaag acttgcagga gtacagagac gatgaatatc
      421 tagaatacag gcagtactgg tgttcgtttg gtcctgatga ttatggagaa agtggaatcg
      481 tattgcctag ccaaaagttt cgactgaaca ctcgaaatcg tgcacctagg ccacagtcaa
      541 tgcgaggttg ccagtgtcat tgggttgtca aacgtctata cgctcgtccg tctcttgtac
      601 ttttggtata caatgaaaat gacagacgac atgtgaataa atctggatat atttgccatg
      661 gcccacttga tcgtgatgct attgggcccg gagccaaaaa gattccatac gtaggaaacg
      721 agattcaaca acaaacaatg tcaatgattt atttgggcat ccctgaagag aatgttctag
      781 aaaagcatat agaagggatt caacgttatt gtgggtccga tgcgaaagtg aacgcgatcg
      841 cttctcaata tgttcataaa cttgggatga taattaagaa gtctacacat gaattggatt
      901 tggatgatca agaaagtata cgaatatggg ctgaccgtaa taagaaatct attttttata
      961 atcaaaagtc ttctgaaaat gaacctttta ttcttggtat tcaaactgag tggcagttac
     1021 agcagatgat tcgttttgga catcgcagtc tcatagcaat cgactcaact tttggaatca
     1081 agagactaaa gtatcctctg tgcacacttt tagtttttga ttcgagacaa catgcactcc
     1141 ctgtagcttg ggtcattacc cgaagtgttg ctaaatcaga tatgtgtaaa tggatgaaag
     1201 ccctacttgg ccgtgttcat gcagttgacc ctacatggaa ggccactggc tttcttattg
     1261 acgatgcagc tgccgagact gatcctataa gggagacatt tacttgccct atactattct
     1321 ccgtgtggcg cattcgtcga tcatggctta gacatatcgt caagaaatgt aggaacgttg
     1381 aagttcaaag agaaatcttt aaacgtttag gagacatagt ttacagcata tggggtggag
     1441 ttgatccctt tcttgtgtta caaaagttca gtcaagattt tgttgaccaa accgacttca
     1501 tgcaatattt tactgcctca tgggttccca agatagaaat gtggttaacg ataatgaaaa
     1561 ccctcccact tgcaagtcaa gaagcatccg gtgcaatcga agcttatcac gtgaagttaa
     1621 agcttaaact ttttgacgac tcacatctcg gtgcacttaa gcgagtcgat tggttggttc
     1681 acaagctaac aaccgagtta cactcgagtt actggctcga tcgatactct gacgaaactg
     1741 attcttttca aatcgtgaaa caagaataca tcaattctac atcatggtat cgtgcgttgc
     1801 aaattcccga cactgatgtc accttagaca acataaacaa ctccttcgct aaagtcgtga
     1861 gccaaaacga cagaaacaaa tcccatttaa tatggaatcc tggttccgag ttcgcatttt
     1921 gcgattgcga atggtcgtta cgtgggaatc tatgcaagca tgtagtcaaa gtcaacatga
     1981 tatgtgagaa tcatccgact taccaaagtt cgatatcgtt tcagtcgtat caagagatac
     2041 ttacaaacat gttgaaaaaa ccacctgatg attcacttga acttgatctg tcaacagctt
     2101 ggttgcatca gataaatgat caaattcaga agctagttga attaaacagg tcaattgata
     2161 ttagtactgt tgttcataat cttccattga aatggtgtga taagaaaaac aggacattac
     2221 caagcacacc tgcaactgca aggctttcga caggagcagt ttctacttcg aataggaata
     2281 tcgttgcgta taggaggaat cgtaagagga agagattgtc gtcaataagg taacagattt
     2341 tcaacgtgtc ggctatttta ttttattttt aaatttttgg tcgtgtttta taatccgaaa
     2401 ctagacagaa ctttgtttga ggtcaatgca tggtcttgtc tatagaactt tcaagttcaa
     2461 cagaattacc ta
//
LOCUS       XM_071886563            2484 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904627), transcript variant X2, mRNA.
ACCESSION   XM_071886563
VERSION     XM_071886563.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2484
                     /gene="LOC139904627"
                     /note="uncharacterized LOC139904627; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139904627"
     CDS             180..2345
                     /gene="LOC139904627"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742664.1"
                     /db_xref="GeneID:139904627"
                     /translation="MELIESIDDIELQNPSAEYFSAADLKWVKFGTPEDHDDVALIPY
                     ARVEDFRNGEGSKVESPTQFHIRRGRKREKDLQEYRDDEYLEYRQYWCSFGPDDYGES
                     GIVLPSQKFRLNTRNRAPRPQSMRGCQCHWVVKRLYARPSLVLLVYNENDRRHVNKSG
                     YICHGPLDRDAIGPGAKKIPYVGNEIQQQTMSMIYLGIPEENVLEKHIEGIQRYCGSD
                     AKVNAIASQYVHKLGMIIKKSTHELDLDDQESIRIWADRNKKSIFYNQKSSENEPFIL
                     GIQTEWQLQQMIRFGHRSLIAIDSTFGIKRLKYPLCTLLVFDSRQHALPVAWVITRSV
                     AKSDMCKWMKALLGRVHAVDPTWKATGFLIDDAAAETDPIRETFTCPILFSVWRIRRS
                     WLRHIVKKCRNVEVQREIFKRLGDIVYSIWGGVDPFLVLQKFSQDFVDQTDFMQYFTA
                     SWVPKIEMWLTIMKTLPLASQEASGAIEAYHVKLKLKLFDDSHLGALKRVDWLVHKLT
                     TELHSSYWLDRYSDETDSFQIVKQEYINSTSWYRALQIPDTDVTLDNINNSFAKVVSQ
                     NDRNKSHLIWNPGSEFAFCDCEWSLRGNLCKHVVKVNMICENHPTYQSSISFQSYQEI
                     LTNMLKKPPDDSLELDLSTAWLHQINDQIQKLVELNRSIDISTVVHNLPLKWCDKKNR
                     TLPSTPATARLSTGAVSTSNRNIVAYRRNRKRKRLSSIR"
     misc_feature    1902..1985
                     /gene="LOC139904627"
                     /note="SWIM zinc finger; Region: SWIM; pfam04434"
                     /db_xref="CDD:309540"
ORIGIN      
        1 aactaactaa aaccccattt cccaatcata aaccctcgcc tctctcacta ctattttcca
       61 ccgtctctca ttacccttta acctacagct acaacagagc ctgcaaaacg acgtcgtaat
      121 ccaactatac atcatcctca cccattttct tacgagttat attggtactt atccatcata
      181 tggagttgat tgaatcaata gatgatatcg agttacaaaa tccttcagca gaatatttct
      241 cagctgcaga cctaaaatgg gtcaaatttg gcactccaga agatcatgat gatgtggccc
      301 taattcctta tgcaagagtt gaagatttca gaaatggaga aggttctaaa gtagaatcac
      361 caacccagtt ccacattagg agaggaagga aacgtgagaa agacttgcag gagtacagag
      421 acgatgaata tctagaatac aggcagtact ggtgttcgtt tggtcctgat gattatggag
      481 aaagtggaat cgtattgcct agccaaaagt ttcgactgaa cactcgaaat cgtgcaccta
      541 ggccacagtc aatgcgaggt tgccagtgtc attgggttgt caaacgtcta tacgctcgtc
      601 cgtctcttgt acttttggta tacaatgaaa atgacagacg acatgtgaat aaatctggat
      661 atatttgcca tggcccactt gatcgtgatg ctattgggcc cggagccaaa aagattccat
      721 acgtaggaaa cgagattcaa caacaaacaa tgtcaatgat ttatttgggc atccctgaag
      781 agaatgttct agaaaagcat atagaaggga ttcaacgtta ttgtgggtcc gatgcgaaag
      841 tgaacgcgat cgcttctcaa tatgttcata aacttgggat gataattaag aagtctacac
      901 atgaattgga tttggatgat caagaaagta tacgaatatg ggctgaccgt aataagaaat
      961 ctatttttta taatcaaaag tcttctgaaa atgaaccttt tattcttggt attcaaactg
     1021 agtggcagtt acagcagatg attcgttttg gacatcgcag tctcatagca atcgactcaa
     1081 cttttggaat caagagacta aagtatcctc tgtgcacact tttagttttt gattcgagac
     1141 aacatgcact ccctgtagct tgggtcatta cccgaagtgt tgctaaatca gatatgtgta
     1201 aatggatgaa agccctactt ggccgtgttc atgcagttga ccctacatgg aaggccactg
     1261 gctttcttat tgacgatgca gctgccgaga ctgatcctat aagggagaca tttacttgcc
     1321 ctatactatt ctccgtgtgg cgcattcgtc gatcatggct tagacatatc gtcaagaaat
     1381 gtaggaacgt tgaagttcaa agagaaatct ttaaacgttt aggagacata gtttacagca
     1441 tatggggtgg agttgatccc tttcttgtgt tacaaaagtt cagtcaagat tttgttgacc
     1501 aaaccgactt catgcaatat tttactgcct catgggttcc caagatagaa atgtggttaa
     1561 cgataatgaa aaccctccca cttgcaagtc aagaagcatc cggtgcaatc gaagcttatc
     1621 acgtgaagtt aaagcttaaa ctttttgacg actcacatct cggtgcactt aagcgagtcg
     1681 attggttggt tcacaagcta acaaccgagt tacactcgag ttactggctc gatcgatact
     1741 ctgacgaaac tgattctttt caaatcgtga aacaagaata catcaattct acatcatggt
     1801 atcgtgcgtt gcaaattccc gacactgatg tcaccttaga caacataaac aactccttcg
     1861 ctaaagtcgt gagccaaaac gacagaaaca aatcccattt aatatggaat cctggttccg
     1921 agttcgcatt ttgcgattgc gaatggtcgt tacgtgggaa tctatgcaag catgtagtca
     1981 aagtcaacat gatatgtgag aatcatccga cttaccaaag ttcgatatcg tttcagtcgt
     2041 atcaagagat acttacaaac atgttgaaaa aaccacctga tgattcactt gaacttgatc
     2101 tgtcaacagc ttggttgcat cagataaatg atcaaattca gaagctagtt gaattaaaca
     2161 ggtcaattga tattagtact gttgttcata atcttccatt gaaatggtgt gataagaaaa
     2221 acaggacatt accaagcaca cctgcaactg caaggctttc gacaggagca gtttctactt
     2281 cgaataggaa tatcgttgcg tataggagga atcgtaagag gaagagattg tcgtcaataa
     2341 ggtaacagat tttcaacgtg tcggctattt tattttattt ttaaattttt ggtcgtgttt
     2401 tataatccga aactagacag aactttgttt gaggtcaatg catggtcttg tctatagaac
     2461 tttcaagttc aacagaatta ccta
//
LOCUS       XM_071886564            2101 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904627), transcript variant X3, mRNA.
ACCESSION   XM_071886564
VERSION     XM_071886564.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2101
                     /gene="LOC139904627"
                     /note="uncharacterized LOC139904627; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904627"
     CDS             61..1962
                     /gene="LOC139904627"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742665.1"
                     /db_xref="GeneID:139904627"
                     /translation="MYWCSFGPDDYGESGIVLPSQKFRLNTRNRAPRPQSMRGCQCHW
                     VVKRLYARPSLVLLVYNENDRRHVNKSGYICHGPLDRDAIGPGAKKIPYVGNEIQQQT
                     MSMIYLGIPEENVLEKHIEGIQRYCGSDAKVNAIASQYVHKLGMIIKKSTHELDLDDQ
                     ESIRIWADRNKKSIFYNQKSSENEPFILGIQTEWQLQQMIRFGHRSLIAIDSTFGIKR
                     LKYPLCTLLVFDSRQHALPVAWVITRSVAKSDMCKWMKALLGRVHAVDPTWKATGFLI
                     DDAAAETDPIRETFTCPILFSVWRIRRSWLRHIVKKCRNVEVQREIFKRLGDIVYSIW
                     GGVDPFLVLQKFSQDFVDQTDFMQYFTASWVPKIEMWLTIMKTLPLASQEASGAIEAY
                     HVKLKLKLFDDSHLGALKRVDWLVHKLTTELHSSYWLDRYSDETDSFQIVKQEYINST
                     SWYRALQIPDTDVTLDNINNSFAKVVSQNDRNKSHLIWNPGSEFAFCDCEWSLRGNLC
                     KHVVKVNMICENHPTYQSSISFQSYQEILTNMLKKPPDDSLELDLSTAWLHQINDQIQ
                     KLVELNRSIDISTVVHNLPLKWCDKKNRTLPSTPATARLSTGAVSTSNRNIVAYRRNR
                     KRKRLSSIR"
     misc_feature    1519..1602
                     /gene="LOC139904627"
                     /note="SWIM zinc finger; Region: SWIM; pfam04434"
                     /db_xref="CDD:309540"
ORIGIN      
        1 gtgagaaaga cttgcaggag tacagagacg atgaatatct agaatacagg cagtaagtta
       61 atgtactggt gttcgtttgg tcctgatgat tatggagaaa gtggaatcgt attgcctagc
      121 caaaagtttc gactgaacac tcgaaatcgt gcacctaggc cacagtcaat gcgaggttgc
      181 cagtgtcatt gggttgtcaa acgtctatac gctcgtccgt ctcttgtact tttggtatac
      241 aatgaaaatg acagacgaca tgtgaataaa tctggatata tttgccatgg cccacttgat
      301 cgtgatgcta ttgggcccgg agccaaaaag attccatacg taggaaacga gattcaacaa
      361 caaacaatgt caatgattta tttgggcatc cctgaagaga atgttctaga aaagcatata
      421 gaagggattc aacgttattg tgggtccgat gcgaaagtga acgcgatcgc ttctcaatat
      481 gttcataaac ttgggatgat aattaagaag tctacacatg aattggattt ggatgatcaa
      541 gaaagtatac gaatatgggc tgaccgtaat aagaaatcta ttttttataa tcaaaagtct
      601 tctgaaaatg aaccttttat tcttggtatt caaactgagt ggcagttaca gcagatgatt
      661 cgttttggac atcgcagtct catagcaatc gactcaactt ttggaatcaa gagactaaag
      721 tatcctctgt gcacactttt agtttttgat tcgagacaac atgcactccc tgtagcttgg
      781 gtcattaccc gaagtgttgc taaatcagat atgtgtaaat ggatgaaagc cctacttggc
      841 cgtgttcatg cagttgaccc tacatggaag gccactggct ttcttattga cgatgcagct
      901 gccgagactg atcctataag ggagacattt acttgcccta tactattctc cgtgtggcgc
      961 attcgtcgat catggcttag acatatcgtc aagaaatgta ggaacgttga agttcaaaga
     1021 gaaatcttta aacgtttagg agacatagtt tacagcatat ggggtggagt tgatcccttt
     1081 cttgtgttac aaaagttcag tcaagatttt gttgaccaaa ccgacttcat gcaatatttt
     1141 actgcctcat gggttcccaa gatagaaatg tggttaacga taatgaaaac cctcccactt
     1201 gcaagtcaag aagcatccgg tgcaatcgaa gcttatcacg tgaagttaaa gcttaaactt
     1261 tttgacgact cacatctcgg tgcacttaag cgagtcgatt ggttggttca caagctaaca
     1321 accgagttac actcgagtta ctggctcgat cgatactctg acgaaactga ttcttttcaa
     1381 atcgtgaaac aagaatacat caattctaca tcatggtatc gtgcgttgca aattcccgac
     1441 actgatgtca ccttagacaa cataaacaac tccttcgcta aagtcgtgag ccaaaacgac
     1501 agaaacaaat cccatttaat atggaatcct ggttccgagt tcgcattttg cgattgcgaa
     1561 tggtcgttac gtgggaatct atgcaagcat gtagtcaaag tcaacatgat atgtgagaat
     1621 catccgactt accaaagttc gatatcgttt cagtcgtatc aagagatact tacaaacatg
     1681 ttgaaaaaac cacctgatga ttcacttgaa cttgatctgt caacagcttg gttgcatcag
     1741 ataaatgatc aaattcagaa gctagttgaa ttaaacaggt caattgatat tagtactgtt
     1801 gttcataatc ttccattgaa atggtgtgat aagaaaaaca ggacattacc aagcacacct
     1861 gcaactgcaa ggctttcgac aggagcagtt tctacttcga ataggaatat cgttgcgtat
     1921 aggaggaatc gtaagaggaa gagattgtcg tcaataaggt aacagatttt caacgtgtcg
     1981 gctattttat tttattttta aatttttggt cgtgttttat aatccgaaac tagacagaac
     2041 tttgtttgag gtcaatgcat ggtcttgtct atagaacttt caagttcaac agaattacct
     2101 a
//
LOCUS       XM_071886565            1729 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine carboxypeptidase-like
            13 (LOC139904629), mRNA.
ACCESSION   XM_071886565
VERSION     XM_071886565.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1729
                     /gene="LOC139904629"
                     /note="serine carboxypeptidase-like 13; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139904629"
     CDS             68..1441
                     /gene="LOC139904629"
                     /codon_start=1
                     /product="serine carboxypeptidase-like 13"
                     /protein_id="XP_071742666.1"
                     /db_xref="GeneID:139904629"
                     /translation="MRMVLKHKSLILWLAYVLIVQSYLLISHSKSIIKRLPGYHGDLH
                     FKLETGYVGVGDKEEVQLFYYFVESTNNSEEDPLIFYIPGGPGASALVTFFLEIGPVS
                     STSDDNNNLTLALNQYAWTQMANIIFIDIPAGTGFSYSETKQGWISSDTNLAILATDF
                     IKKFLTEHPKFKKNPLYIAGISYIGIIVPKITLDLYESNERGDQPTLNIQGYILCSPF
                     TNKFEDFNSRFKYAHRNALISDDIYMSAIKNCQGNFVSTYSANSFCASSLQMYEECTS
                     RINLDNILEPFCDENDPIQDCDNDSYIETWANTDIVQQALHVRQGKVGKWELINQTLH
                     YNQGKNDTFCYSYDIFSSYSYHKKLSTKNCRALIFSGDQDMTFPYVGVEEWITALNVG
                     VEVPWKPFYVDGQVGGYQTKYAENEYSLTFATVKGAGHLVPLTKPKESIALVQRWFNS
                     QPYVSDY"
     misc_feature    176..1414
                     /gene="LOC139904629"
                     /note="Serine carboxypeptidase; Region: Peptidase_S10;
                     pfam00450"
                     /db_xref="CDD:459815"
     polyA_site      1729
                     /gene="LOC139904629"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtactgcggg catgcaatac atcctggcat attaccgaac cttaccaaaa ttgaagcaac
       61 aaatcatatg agaatggtgt tgaaacacaa atctttgatt ctttggttag cttacgttct
      121 tatcgttcaa tcttacctac taatatcgca ttccaaatca atcatcaaaa gacttccggg
      181 atatcatggt gatcttcatt tcaaacttga aactggttat gtaggagttg gggataagga
      241 agaggttcaa ttattttact attttgttga gtcaacaaat aattcagaag aagaccctct
      301 cattttttat attcctggag gtcccggagc atctgcattg gtaaccttct ttcttgaaat
      361 aggtccagtt agctcaacat cggatgacaa taataatctc acattagcgt tgaatcaata
      421 cgcatggaca cagatggcta atatcatatt tattgatata cctgctggaa ccggcttttc
      481 ttactccgaa actaaacaag ggtggattag cagtgatacc aatttagcta ttctagccac
      541 agattttatc aaaaagtttc tcacggaaca tcctaagttt aagaagaacc cattatacat
      601 agcaggaatt tcttatatcg gtattattgt tcccaaaatc actctggatt tatatgaaag
      661 taatgaacga ggagatcaac caacattaaa tattcaagga tacattcttt gtagtccttt
      721 caccaataag ttcgaggatt tcaattccag attcaagtat gctcatcgta acgcacttat
      781 atcagacgat atttacatgt ctgcgataaa aaattgtcaa ggaaattttg tgagtactta
      841 ttcggccaat tcattttgtg caagtagtct tcagatgtat gaagagtgca caagtcgtat
      901 taatctggat aacattttgg agcctttttg tgatgaaaat gatccaatac aggattgtga
      961 taatgacagc tacatagaga catgggcgaa tactgatatt gtgcaacaag ctctccacgt
     1021 tcgtcaagga aaagtcggta aatgggagtt gattaaccaa acattgcatt acaatcaagg
     1081 aaagaatgac acgttctgtt attcgtatga tatatttagt agttattctt atcataagaa
     1141 actctctacc aaaaattgtc gagctttgat tttcagtggt gatcaagata tgacatttcc
     1201 gtatgttggt gtggaggaat ggataaccgc actgaatgtt ggagttgaag tcccatggaa
     1261 accgttctat gttgatggtc aagtcggagg ataccaaacg aaatacgcag aaaatgaata
     1321 ttcgttaaca tttgctacag ttaaaggagc aggacatttg gttccattga ccaagcctaa
     1381 agaaagtatt gcattagtgc agaggtggtt taattcacaa ccttatgtaa gcgattatta
     1441 acaaatctag cattgtgtgt taaatcatga tatgtatcca aaacaagtac aataaaacta
     1501 ttttatctcc tgtaattaaa gaatcctaag agacagtact ttgggcagtc acatcattct
     1561 taatcagatg caaaatgcat tggaaacact catgattctg ttgccttttg aaatgttgct
     1621 tacaaagtaa tttcattttc ttgaccttac taataatggt caacattata ccgtacctag
     1681 cgacatttga tggagtaatg taatagaaaa tgaatagttg ttttttttt
//
LOCUS       XR_011778920            1014 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904630), ncRNA.
ACCESSION   XR_011778920
VERSION     XR_011778920.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1014
                     /gene="LOC139904630"
                     /note="uncharacterized LOC139904630; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904630"
     ncRNA           1..1014
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904630"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904630"
ORIGIN      
        1 gtttcttcca acacaaatca gtaacaatat aaaatctcct tttcgcattc ttgagaattc
       61 atcaggttcg atttcttcat gtttatctcc aattcaggtg gttataggta tatgatgcaa
      121 cactattcgg atgcaaggac aattgttagg cgctttggat atatccagat ttgttcataa
      181 ctttgaagtg caatgcgaag tggccagagg tcgtgcgatt ctttgacaat aaggatttaa
      241 gtccttaaga catacctgag atgttgcgac gactctttaa gatgtacctt ggcagtataa
      301 taaatgattt catgaaaaaa tcactttttg gggaagttga agcagttctc aagagcaaaa
      361 gtggttgatt cagttagtgg catcaatgtc aactatgatg gtaaatttac tttatttttc
      421 atatgcattt gttccatttc ctttatgcaa gaatgtttgt tcgtttacta atgttggtcc
      481 ttaaatagac ttttaaaaac ataacattga attgcagttt atttgataat ttgttcttac
      541 agaacatttg gattggaagg gtatataatt gaaaagcagt tatggctatt gttgctaggt
      601 tcttgcattg tacaaatgct ttcggtccta ccaatcgcta actttatgtc tctttatctt
      661 tattcttatt attagtttgt tgcgttaatt gtgttaattt catattagag ggaatttgca
      721 atttagtcaa atttattttg tttaagttac tgcaatatta aatatgttca tacaactttt
      781 aatcataaca agttgcatat ataattgtta caaatcatga tggtagacct aaaactattt
      841 ggaacagtgg caatatgggc gagtcggaca gagttagtat aaactctaaa gtgttgttgc
      901 tttgatgccc atagagcatt atagagttac ttatgttaaa actgcaggtt taggggattt
      961 atctgtcgca taaggagtat actattatta agatgaaggt tcagtttttt tgat
//
LOCUS       XM_071886566            1689 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides patatin-like protein 2
            (LOC139904631), mRNA.
ACCESSION   XM_071886566
VERSION     XM_071886566.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1689
                     /gene="LOC139904631"
                     /note="patatin-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 51
                     Proteins"
                     /db_xref="GeneID:139904631"
     CDS             120..1424
                     /gene="LOC139904631"
                     /codon_start=1
                     /product="patatin-like protein 2"
                     /protein_id="XP_071742667.1"
                     /db_xref="GeneID:139904631"
                     /translation="MSFKEAPRSPLQPPTYGNLITILSIDGGGVRGIIPSVILDFLES
                     ELQKLDGEDARLADYFDVIAGTSTGGLVTAMLTTPDEGGRPIFAAKDVKDFYLEHCPK
                     IFPHDSTPLAPAANVVKALSGPKYTGEHLHNIIEEKLQEKRLHETLTNVVIPTFDIKY
                     LQPTIFSSFMLNKVPSLDAKLSDICIGTSAAPTYLPSHSFQTEDSEGNALREFNLIDG
                     GVAANNPTLVAISEVTKEITRGSPNFFPIKPTEYGRFLVLSLGTGTAELQEKYDATKS
                     SSWGVLGWLAGGGSTPLVDVFSQASVDMADYHISTVFQALHSEENYLRIQDDTLSGDL
                     TAMDLATEENMENLVKVGENLLKKPVTRVNLGTGICEPYHPTTNEMALKKFAGILHKE
                     KSVRELRSPNTNKGLQVNREKTQMMPAVEHSFPDLQKLSTIN"
     misc_feature    168..1223
                     /gene="LOC139904631"
                     /note="Patatin-like phospholipase of plants; Region:
                     Pat17_isozyme_like; cd07214"
                     /db_xref="CDD:132853"
     misc_feature    order(201..206,210..212,318..320,768..770)
                     /gene="LOC139904631"
                     /note="active site"
                     /db_xref="CDD:132853"
     misc_feature    312..326
                     /gene="LOC139904631"
                     /note="nucleophile elbow; other site"
                     /db_xref="CDD:132853"
ORIGIN      
        1 tttaaataaa ccataacata aaacaaacac tacacaaaat ttattatttt tcaaactggt
       61 cgtttataac taacaagtgt ctcaaaatct tctagactta tagtagtatt atattaacca
      121 tgtcatttaa agaagctcca agatcacctt tacaaccacc aacatacgga aacctaatca
      181 cgattctcag catcgacggt ggtggagtac gaggaatcat tccaagtgtg atcctcgatt
      241 ttttagaatc tgagctacag aaactagatg gtgaagacgc aaggcttgca gattactttg
      301 acgtaattgc tgggacaagt acaggtggtc ttgtgacggc tatgttaacg actccagatg
      361 aaggtggtcg tccaattttt gcggctaaag atgtaaaaga tttttatctt gaacattgtc
      421 ctaaaatctt ccctcatgat agtactcctt tggctcctgc tgcaaatgtg gtgaaagctt
      481 tatcagggcc aaaatacact ggtgaacacc tacacaatat tattgaagaa aagttacaag
      541 agaaacgact ccacgaaacg ttaacaaatg ttgtgattcc aacgtttgac atcaaatatc
      601 ttcagccaac aatcttctca agcttcatgt taaataaggt tccgagccta gatgccaagt
      661 tatccgacat atgtattgga acgtcagcag ccccaactta tcttccttca cattcgttcc
      721 aaaccgaaga ttctgaagga aatgcactta gagaatttaa tcttatcgat ggaggagtgg
      781 ctgctaataa tccgactttg gttgcaataa gtgaagtaac aaaggaaata acaagaggaa
      841 gtcccaactt tttcccgata aagccaacag agtatggacg gtttctagtt ctatcattgg
      901 ggacggggac tgcagaattg caagagaaat atgatgctac aaagtcttct agttggggcg
      961 ttttagggtg gttggcaggc ggtggctcga ctccattagt ggacgttttt agtcaggcga
     1021 gtgttgatat ggctgattat catatctcaa ctgtatttca agctcttcat tcagaagaaa
     1081 attatcttcg aattcaggat gacactttaa gtggtgactt aacagccatg gatttggcga
     1141 ccgaagaaaa catggagaat ttggtgaaag taggtgagaa tttgttgaaa aagccggtga
     1201 ctagagtgaa cttagggacg gggatatgtg agccatacca tcccacaaca aacgagatgg
     1261 ccttgaaaaa gtttgcggga atacttcaca aggagaaaag tgttcgcgag cttagatcgc
     1321 caaatactaa taaaggactc caggttaatc gagagaaaac gcaaatgatg ccggcagttg
     1381 aacactcgtt tccggatcta cagaagctca gcacgatcaa ctaatcaaac ttcaatttgt
     1441 ttcttttatt gctattacat tacatactga attacattta tattgttaat ttggctaagt
     1501 ttagaccatg tggttagtac gtgtgaatga ctttagatag ttgatttgta agattaaaga
     1561 gcaaaagatg attatattgt tattgattca tagcgtttac gaaagttatt tttaatattt
     1621 ctttagtttc aatacatata tacatatact actaaagtgt ttcgtcatta aataataacg
     1681 attacgaaa
//
LOCUS       XR_011778921             550 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904632), ncRNA.
ACCESSION   XR_011778921
VERSION     XR_011778921.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..550
                     /gene="LOC139904632"
                     /note="uncharacterized LOC139904632; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904632"
     ncRNA           1..550
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904632"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904632"
ORIGIN      
        1 cttcggcaac ttgtggatcg atcgatctcc cgtgttaccg gaaaacgcca ctgatctatc
       61 cgattatccc taaacatctc cggcgatcca attatttctg tgtaaaagac cgctgaacca
      121 tctcagagta gttcaaagaa gaaagtaaat caacaaccca tatgcgtgga ataactgcat
      181 tatcacgctc gaggaataca tttaatagca tttgtcgtgt gaaaacatcc tgggtggcta
      241 ctgtgacacc aaagaaggta aatgatgatg attttgagaa gaacgaaaag atgaaaaagg
      301 aggagattga tcctatcgtt gcttttagta agccaccacc gcttccgccg gttcttggac
      361 cacttgttct tctatctttg tgggaaactt ggtcagcaaa tgacgatgaa tgagagatgc
      421 gatgtttgta agtcttttct tgaatcagga aattgtaatg gttttcttgt ctttcaattt
      481 tgaatgattg tgaatagaaa ctaggatatt gcttatgttt cgactcttaa aaaatctctg
      541 agcagtttaa
//
LOCUS       XM_071886567            3368 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear pore complex protein
            NUP96 (LOC139904633), mRNA.
ACCESSION   XM_071886567
VERSION     XM_071886567.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3368
                     /gene="LOC139904633"
                     /note="nuclear pore complex protein NUP96; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139904633"
     CDS             218..3268
                     /gene="LOC139904633"
                     /codon_start=1
                     /product="nuclear pore complex protein NUP96"
                     /protein_id="XP_071742668.1"
                     /db_xref="GeneID:139904633"
                     /translation="MGVDLDTLDSFCQSLVQSQSQFKKRKVTLEGDNGSSTYSVSCEV
                     KTFLPTLQASDYFMEPSLSELFTRELTDPSHCSRVQNFTVGRYGYGSVRFFGETDVRW
                     LDLDQIIKFNRHEIIVYEDETTKPVVGKGLNKAAEVTLVLQISSSVEKLMVTAEKQGA
                     EFISFDPNRKEWKFSVQHFSRFGLNDDEEDVMMDDADADVDADAEAREPVTMNDSDGS
                     DFDEEGALVDPRLLSHSLPSHLGLDPVRMKEMRMMMFPAEEEEDDEELNERFSHHKPP
                     FGKEPLSKPVQRSSPPAIRKTPLALLEYNPGSFTSSPNGSILLSQQNKGLPLTTAKVQ
                     GFKMELKETPVTKSYSRNIVDAGLFMGRSFGIGWGPNGVLLHCGSTVGGGVQKRELSS
                     MINLEKVATDDVVRDENNKVREELIDLCFDAPLNFHKEISHETNEVVVDSFKLKARKL
                     VFNRLELSHVCRSYIDIIEKQLEVPGLSSSARVVLMHQVFVWELIKVLFSSKESSVEV
                     DEDALPLIRRAEFSEWLQESVCHRVQDDISSLNDTNDDLQHLFLLLTGRQLDAAVELS
                     SSRGDVRLACLLSQAGGSTVNRTDIDRQLKLWKTNGLDFNFIEKDRVRLFELLAGNID
                     AALGEMHIDWKRFLGLLMWYKLPPDTDLITIFQTYHHLLEGGRAPFPVPVYIDEGLVD
                     EGVIWNPGKRFDLAYYLMILHGSEEREYSILKNMFSAFASTHDPLDHHMIWHQRAVLE
                     AVGTFSSDDLHVLDMGLVSQLLSLGHCHWAIYVVLHMPHRDDYPCLQANVIREILFQY
                     CETWSAQENQRQFIEDLGIPSAWLHEALAIYHAYYGNSFKTLEHYLGCAFWQKAHSTF
                     ITSVAHSLFLSGKQSEILKFATSMEDHKSEIENWDMGAGIYLTFYALRDSLKENDDSM
                     MELVSLADKNDACKKFFSRLKGSMAIWDSRLPIDARMVYAKMAEEISDLLVADSGEGS
                     TTEVKLECFNSIFDSPMPEDLLSCHLQSAISHFTLHLTETASLT"
     misc_feature    377..754
                     /gene="LOC139904633"
                     /note="Nucleoporin autopeptidase; Region: Nucleoporin2;
                     pfam04096"
                     /db_xref="CDD:461171"
     misc_feature    1859..2704
                     /gene="LOC139904633"
                     /note="Nuclear protein 96; Region: Nup96; pfam12110"
                     /db_xref="CDD:463462"
ORIGIN      
        1 atctccggtg ctattttttg ttcatcgttc cacctattaa ctgccggaaa tcgattattc
       61 cggcgtatgc tatctcgact tcgcacattt tagtctcaca aagttcgtgt tgagaatcat
      121 cgtctcattc tcatacgttc ttttatatgc atttcattgg gagtttttga agaatatcac
      181 tggtgaatag atagggtgcc acactggtcg atctaaaatg ggtgtggatt tggatacgtt
      241 agactcattt tgtcagtcac ttgttcaatc tcaatctcag tttaagaaaa gaaaagtgac
      301 tttggaaggt gataatggct cttcaaccta ttcagtctct tgtgaggtta aaactttctt
      361 gcctactctc caagcttctg attatttcat ggaacctagt ctgagtgaat tgttcactag
      421 ggaactcacg gatccaagtc attgcagcag ggttcaaaat tttacagttg gtagatatgg
      481 ttatggaagt gttaggtttt ttggtgaaac tgatgtcaga tggttagatt tggaccagat
      541 tattaagttc aataggcacg agataattgt gtatgaagat gaaaccacaa aacctgtggt
      601 tggtaaggga cttaacaagg ctgctgaagt aacattagtg ctacaaataa gctcctcggt
      661 tgaaaagctg atggtgactg cagaaaagca aggagctgag tttatttctt ttgacccaaa
      721 ccgaaaagaa tggaagtttt ccgttcaaca ttttagcaga tttggtttga acgatgatga
      781 ggaagatgtt atgatggatg atgcggatgc ggatgtggat gcggacgctg aagctcgaga
      841 accagttaca atgaatgata gtgatggttc tgattttgat gaagagggcg cgttagtgga
      901 tccccgactg ctttctcatt cacttccttc acaccttggt cttgatcctg ttagaatgaa
      961 ggaaatgaga atgatgatgt ttcctgctga agaagaagaa gatgatgagg aactgaatga
     1021 aagattttca caccataaac caccgtttgg taaggaaccg ttaagcaagc cagttcaaag
     1081 atccagccct ccagcaattc ggaaaacacc actagcttta cttgagtaca accctggcag
     1141 ttttacctca agccctaacg ggtctatttt attgtcccaa caaaacaaag gacttccgtt
     1201 gacaacagca aaagttcagg ggtttaaaat ggaactaaaa gaaacaccag taacgaaaag
     1261 ctattcccgg aacatagttg atgctggatt gttcatgggt aggtcatttg gtataggctg
     1321 gggtccaaat ggggtccttc ttcactgtgg ttctactgtt ggtggtggtg ttcaaaaacg
     1381 ggaattgtca tcaatgataa atctagaaaa agttgcaact gatgatgttg taagagatga
     1441 aaataacaaa gtaagggagg aacttataga tttatgtttt gatgctcctc taaattttca
     1501 taaagaaatt agtcatgaga ccaacgaagt tgtagttgat tcgtttaagc taaaggctcg
     1561 taagcttgtc tttaatcgct tagaactttc tcatgtatgt cgaagctaca tagatattat
     1621 cgagaagcaa ttagaggtac caggattatc ttcttctgct cgtgtagttt taatgcacca
     1681 agtgtttgtt tgggaactga taaaggttct gttttcctca aaagagagtt cagtagaggt
     1741 tgatgaagat gcacttcctt taatccgaag agcagagttc agtgaatggt tgcaagagag
     1801 tgtgtgtcac cgtgtacaag atgatataag ctccttaaat gatacaaatg atgatttgca
     1861 gcacctgttt ttgcttctaa ctggaagaca acttgatgca gctgtagaac tgtcctcttc
     1921 taggggagat gttagacttg cttgtctgct gagtcaggct ggtgggtcca ctgtcaatcg
     1981 tactgatatt gatcgacaac ttaagctttg gaaaactaat ggtcttgatt tcaattttat
     2041 cgaaaaggat cgtgtgcggc ttttcgagtt gcttgctggt aatattgatg ctgcattagg
     2101 tgaaatgcat attgactgga aaaggttttt aggtttgttg atgtggtata agcttccacc
     2161 tgatactgat ctgattacca tttttcagac gtatcatcat cttttagaag gtggacgagc
     2221 cccttttcct gttcctgttt acatagacga aggactggta gacgaaggtg taatatggaa
     2281 ccctggtaaa cgttttgatc tcgcatatta tcttatgatt cttcatggca gtgaagagag
     2341 agaatatagc atcttgaaga atatgtttag tgcgtttgct tcaactcatg atccacttga
     2401 tcaccatatg atttggcatc agcgggcagt gttggaagca gttggaacat ttagttctga
     2461 tgatcttcat gttcttgaca tgggtcttgt ttctcagttg ctatccctag gacactgtca
     2521 ttgggctatc tatgtcgtgc ttcacatgcc ccatcgtgat gattatcctt gtctacaagc
     2581 taatgtcatt agggaaatct tgttccagta ttgtgaaact tggagtgctc aagagaacca
     2641 acgccaattt attgaggatt tgggtattcc atcagcgtgg ttgcatgagg cattggcaat
     2701 atatcatgct tactacggga attctttcaa gacccttgaa cactatcttg gatgtgcttt
     2761 ctggcaaaaa gcacattcaa cgtttataac ttcagttgca cattcactgt tcttatcagg
     2821 caagcaatca gaaattttga agttcgcaac ctctatggaa gaccataaat cagagatcga
     2881 gaattgggac atgggagctg gaatctattt aacattttat gcccttagag attctttgaa
     2941 ggagaacgat gactcaatga tggaactggt atctcttgca gacaaaaacg atgcctgtaa
     3001 gaaattcttc agtcgcttga aagggtctat ggcaatctgg gacagccgtt tgcctattga
     3061 tgccagaatg gtgtatgcaa agatggcaga agaaatcagt gatctgcttg ttgccgattc
     3121 tggggagggt tcgaccacag aggttaagtt ggaatgcttc aattcaattt ttgactcccc
     3181 tatgcctgaa gatcttcttt catgccattt gcagtctgca atatcacatt ttacattgca
     3241 tcttacagaa acagcttcat tgacataaaa caaaatatat cccgtcaaag ctttttattt
     3301 tgtgttgtat ttgtaaacac taattacgag ttgaaatttt gtaagtaatg cttgtgagga
     3361 tgattatg
//
LOCUS       XR_011778922             444 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904634), ncRNA.
ACCESSION   XR_011778922
VERSION     XR_011778922.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..444
                     /gene="LOC139904634"
                     /note="uncharacterized LOC139904634; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904634"
     ncRNA           1..444
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904634"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139904634"
ORIGIN      
        1 tagttcccaa attgttttta ccaggtctag aaccctaatt cgaaaattac gattatggtt
       61 aattgttggt atggtagaaa agcggttctt cgcacatcaa ctactcagag aaacccagga
      121 agaagatttt acgcttgccc aattccgtgg tccaaatgtc agtttgtaca atggtatgac
      181 ccaccagtga tggatcgaga agagttattg gagatgaatg aaatgcttga attgaaactc
      241 aagatggagg aaaggaaaag aagatggatc cagtttcttt tgatattgtt atgttttgtc
      301 attgtttatt ccaaattttc ttattagtta gattgtagct cgatccagtt tctttcgatc
      361 cagtttcttt tgaaagtaat gtaatttgga atttcatatt gaatgtaccc tgcagttcga
      421 ttataaatga atttttctta ttga
//
LOCUS       XM_071886568            4230 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphoglucan, water
            dikinase, chloroplastic (LOC139904635), transcript variant X1,
            mRNA.
ACCESSION   XM_071886568
VERSION     XM_071886568.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4230
                     /gene="LOC139904635"
                     /note="phosphoglucan, water dikinase, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139904635"
     CDS             190..3780
                     /gene="LOC139904635"
                     /codon_start=1
                     /product="phosphoglucan, water dikinase, chloroplastic
                     isoform X1"
                     /protein_id="XP_071742669.1"
                     /db_xref="GeneID:139904635"
                     /translation="MDSLRVISSYSATKNPSSLGTHIVKKFRFLNYHNRQRTFKIVGF
                     YKPRLNLYGGYHLGFQQPPSPIVCAVSTETREEETGETEMKSKSAQGKVQLTLRLDHQ
                     VKFGEHVGVLGSTKEFGSWKKKKQMNWTETGWVVDMECKSGETIEFKFVVEQMDKSMV
                     WEGGDNRVLKLPKSGSFEIVFHWNMTNESVNLLPIDGREYEVEVESVGEIQDENGSLN
                     LDAAGSPFVEKWQGKGTSFMKSNEHGSRERQRQWDTSGLDGVALKLVEGDQRGKNWWK
                     KLEVIRELVIGSKDGADRLDALVYSAIYLKWINTGQIPCYEDGGHHRPNHHAEISRHI
                     FRELERISNRKDTSPQELLVIRKIHPCLPSFKAEFTASVPLTLIRDIAHRNDIPHDLK
                     QEIKHTIQNKLHRCAGPEDLIATAAMLERITKTPGQYNDAFVEQFKIFHHELKDFFNA
                     GSLTEQLEAVKESFDEKGKAKLSSFLECKMALDNFQGTPDILKGNGIDMLINTIHSLN
                     GLREMVTKGLESGIRNDAPDTAIAMRQKWRLAEIGLEDYAFVLMSRYLNALEAAGGAH
                     WLADNVNSMNVNSWNDPIGALVVGIRQLGLSGWKPEECKAIENELLAWQEKRLLEKEG
                     FIYVFGTEDGKTIWALRIKATLDRSKRLIDEYSEALLQIFPPKVEMLGKALGIPENSV
                     RTFTEAEIRAGIIFQISKLCTMLLKAVRTTLGSQGFDVLVPGLVHGTLIQVERIVPGI
                     LSSSVEGPIILMVSKADGDEEVTAAGNNIVGVILLQELPHLSHLGVRARQEKVAFVTC
                     EDDDKIASIKNLEGKYIRLDASPSGVNVIPSSKEDGIKDHPIETSSNGTPMNSVPKSI
                     YASQSVSTGDIIPLADADVQTSGAKAASCGTLASLAAASAKVYSDQGVPAAFNVPNGA
                     VIPFGTMELAIKQNNSTQTFESLLEQLETAKMDGGELDKLCNELQNLITSVQLPNQII
                     ESLGKLFESNARLIVRSSANVEDLAGMSAAGLYDSIPNVTLSNPINFGKAVCRVWASL
                     YTRRAVLSRRVAGVSQKEASMAVLVQEMLSPDLSFVLHTVSPTDNDKNVVEAEIAPGL
                     GETLAAGTRGTPWRLSSGKFDGVVKTLAFANFSEEMVVGGLEDGEVLHLTVDYSKKPL
                     TVNSVFRQQLGQKLGAVGLFLEQRFGCAQDVEGCLVGKDLFIVQTRPQPL"
     misc_feature    463..738
                     /gene="LOC139904635"
                     /note="The family 20 carbohydrate-binding module (CBM20),
                     also known as the starch-binding domain, is found in a
                     large number of starch degrading enzymes including
                     alpha-amylase, beta-amylase, glucoamylase, and CGTase
                     (cyclodextrin glucanotransferase). CBM20 is...; Region:
                     CBM20; cl15347"
                     /db_xref="CDD:449530"
     misc_feature    order(496..513,574..576,583..585,589..591)
                     /gene="LOC139904635"
                     /note="starch-binding site 2 [chemical binding]; other
                     site"
                     /db_xref="CDD:99892"
     misc_feature    order(550..552,634..636,670..675,685..687)
                     /gene="LOC139904635"
                     /note="starch-binding site 1 [chemical binding]; other
                     site"
                     /db_xref="CDD:99892"
     misc_feature    2824..3771
                     /gene="LOC139904635"
                     /note="Pyruvate phosphate dikinase, AMP/ATP-binding
                     domain; Region: PPDK_N; pfam01326"
                     /db_xref="CDD:426201"
     polyA_site      4230
                     /gene="LOC139904635"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatcgctcac ggggatttga tattttgata aaaccctctc tgccacgtcg tcttcaccct
       61 cctttttatc ttcatcatca ctctcaaaca tacacaaaaa aattacagta tatacttaca
      121 aacactcttt ctaatgagct atacaatcaa gtaattttgt cattacattt ttaagaagat
      181 attgtgtaaa tggattctct gcgtgtgatt agttcttact ctgccaccaa gaatccatcc
      241 tctttaggaa cccatattgt aaagaaattt agattcttga attaccataa ccggcaaaga
      301 acttttaaaa ttgttgggtt ttataagcca agattgaatc tttatggtgg ttatcatttg
      361 ggatttcaac aaccaccttc tcccattgtt tgtgctgtgt ctactgaaac cagagaagaa
      421 gagactggtg aaacagagat gaagtcgaaa tcagctcaag ggaaggtcca actcactctg
      481 cggttggatc atcaggtaaa atttggtgag catgttggag tattggggtc aacaaaagag
      541 ttcggatcat ggaaaaagaa gaaacagatg aattggactg agaccggttg ggtagtggat
      601 atggaatgta aatcgggcga aactattgaa tttaaatttg ttgttgagca aatggacaag
      661 agtatggttt gggaaggtgg tgataaccgt gtcttgaagc tgccaaaatc tgggagtttt
      721 gagatcgttt ttcattggaa tatgactaat gaatccgtga atctattgcc tatagatggt
      781 agagaatatg aggttgaagt ggaaagtgta ggtgagattc aagacgagaa tggttcgttg
      841 aatctggacg ctgcagggag tccttttgtg gagaaatggc aagggaaggg aacttcgttt
      901 atgaaatcga acgagcatgg tagtagagaa agacaaagac aatgggatac atcgggcctt
      961 gacggggtgg ctttaaagtt agtggaaggt gatcagagag gcaagaactg gtggaaaaag
     1021 cttgaagtta ttcgtgagct agtgattgga agtaaggatg gtgcagatcg tttggatgct
     1081 cttgtatatt cagccatcta tctaaagtgg ataaatactg gtcaaattcc ttgctacgag
     1141 gatgggggtc atcacaggcc gaatcatcat gctgaaattt ctaggcatat attccgggaa
     1201 ttggaacgaa tttctaacag gaaagatact tctccgcagg agttgcttgt tatccgcaaa
     1261 attcatccat gtctaccatc ttttaaggca gaattcactg catctgttcc tttaactcta
     1321 atacgagaca tcgctcacag aaacgatatc ccacatgacc tcaagcaaga aattaaacac
     1381 acaatacaga ataagcttca ccgatgtgcc ggccctgaag atttaatagc cactgctgca
     1441 atgcttgaaa gaatcaccaa gaccccggga caatataacg acgcatttgt tgaacagttc
     1501 aaaatattcc atcatgaact caaagatttc ttcaatgctg gaagccttac agaacaactg
     1561 gaggcagtta aagaatcttt tgatgaaaag ggcaaagcaa agctttcatc attcttggag
     1621 tgcaagatgg ctttggataa ttttcaagga acacctgata ttttgaaagg aaacggaata
     1681 gatatgttga tcaatacgat acattcgtta aatggtcttc gtgagatggt tacaaaaggt
     1741 cttgagagtg gtatccgtaa cgacgctcct gatactgcaa tagcaatgcg ccaaaagtgg
     1801 cgtcttgctg agattggatt ggaggactat gcctttgttc tcatgagcag atatctcaat
     1861 gcacttgaag ctgctggtgg ggcccactgg cttgcagata atgtgaactc gatgaatgtt
     1921 aactcatgga atgacccaat tggtgctctt gttgttggca ttcgtcagtt gggcttatcc
     1981 gggtggaaac cagaagaatg taaagcaatc gaaaatgaac ttctagcttg gcaagaaaaa
     2041 agacttttgg aaaaagaagg tttcatttat gtctttggta ctgaagatgg gaagacaatt
     2101 tgggccctaa ggatcaaagc tacattagat agatctaaga ggctgattga tgaatactct
     2161 gaagcacttc tccaaatctt ccctccaaaa gtagagatgc tgggcaaagc acttggaatt
     2221 cctgaaaata gtgtgagaac gttcacagaa gcagagattc gtgctggcat aatatttcag
     2281 atttccaaac tttgtactat gcttctgaag gcggttagga ccacactcgg gtcacaaggt
     2341 tttgatgttc ttgttcctgg cttggttcat ggaactttaa tacaggttga aagaatagtt
     2401 cctggcatat tatcatcatc tgttgaggga cccattattc ttatggtcag caaagccgat
     2461 ggagatgaag aggtaacagc tgcaggaaac aacatagtcg gagtcattct actccaggag
     2521 ttgcctcact tatctcatct tggtgtcagg gcccgacaag agaaagttgc atttgtgaca
     2581 tgtgaagatg atgataaaat cgctagtatc aaaaacctcg agggcaaata tataaggcta
     2641 gatgcatcac cgtcaggtgt caatgtcatt ccttcttcga aggaagacgg aattaaggac
     2701 catcctattg agacttcatc aaacgggact cctatgaatt ccgttcctaa atccatctac
     2761 gcaagccaga gtgtttcgac gggcgacata ataccacttg cggatgcaga tgtacaaact
     2821 tctggcgcaa aggcagcttc ttgtggtacc ttagcttctc tagctgcagc ttctgctaaa
     2881 gtttatagtg atcagggagt tccagcagct tttaatgtcc caaatggggc tgtgattccc
     2941 tttggtacta tggaacttgc aataaaacaa aacaactcga cccaaacgtt cgaatcatta
     3001 ttggaacagc ttgaaacggc caaaatggac gggggagagc tcgacaaatt atgcaacgaa
     3061 ctgcaaaatc tgatcacatc cgtacagctt ccgaatcaaa tcattgaaag tttagggaaa
     3121 ttgtttgaga gtaatgcacg attgatcgta cgatcaagtg ccaacgtgga agatttagcc
     3181 ggaatgtctg ctgcagggct atacgactcg atccctaacg ttaccctctc gaatccaatc
     3241 aatttcggta aagccgtttg tcgtgtatgg gcctcgttat acacacgacg agcggtttta
     3301 agtcgtagag ttgcaggtgt gtcacaaaaa gaagcttcaa tggcggtttt ggtccaagaa
     3361 atgctttcac cggacctttc atttgtgctc catacggtca gcccaacgga taacgacaaa
     3421 aacgtggtgg aagcggagat cgcaccgggg ctcggggaga cgttagccgc cgggacccgc
     3481 ggtacaccgt ggcggttatc atccgggaaa tttgacgggg tggttaagac acttgcgttt
     3541 gcgaatttta gtgaggagat ggtggtgggt ggtttggaag atggtgaagt actacatttg
     3601 acggttgatt atagcaagaa gccgttgacg gtgaactcgg tttttcggca acagttgggg
     3661 cagaaacttg gtgctgtggg tttgtttctt gagcagaggt ttgggtgtgc tcaagatgtt
     3721 gaagggtgtt tggttggtaa agatttgttc attgttcaga ctcggcctca acccttgtaa
     3781 agattattaa gtttgtgaca gtgttaatgc ttgttgctat gttattacaa atggaatatg
     3841 gatatggaag tataataaga ctagtgtgta aacagaagat cacactttgt gctagtatat
     3901 aataaatgga agggtttggt tagtgaaagt tcgtgcgtgt ccccgactta tttgtttgcc
     3961 tttggtgctt gtgggtaggg taaagaaccg aactctagtc gagcagtaag aagttgagtt
     4021 tgggcttgtt cgatttttac tatctttgaa gtaaactcga actcgataat aaatttcatc
     4081 taatattcga gttcgaactt gaatattttt ttatgttcga actcgaactc gaactcgata
     4141 ttcagtttaa tttttatgtt tgatgatcat actttagctc gaaatcgagc tcaattaagg
     4201 tcgactaata aattcaaact tgggcgtgtt
//
LOCUS       XM_071886569            4211 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphoglucan, water
            dikinase, chloroplastic (LOC139904635), transcript variant X2,
            mRNA.
ACCESSION   XM_071886569
VERSION     XM_071886569.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4211
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4211
                     /gene="LOC139904635"
                     /note="phosphoglucan, water dikinase, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139904635"
     CDS             189..3761
                     /gene="LOC139904635"
                     /codon_start=1
                     /product="phosphoglucan, water dikinase, chloroplastic
                     isoform X2"
                     /protein_id="XP_071742670.1"
                     /db_xref="GeneID:139904635"
                     /translation="MDSLRVISSYSATKNPSSLGTHIVKKFRFLNYHNRQRTFKIVGF
                     YKPRLNLYGGYHLGFQQPPSPIVCAVSTETREEETGETEMKSKSAQGKVQLTLRLDHQ
                     VKFGEHVGVLGSTKEFGSWKKKKQMNWTETGWVVDMECKSGETIEFKFVVEQMDKSMV
                     WEGGDNRVLKLPKSGSFEIVFHWNMTNESVNLLPIDGREYEVEVESVGEIQDENGSLN
                     LDAAGSPFVEKWQGKGTSFMKSNEHGSRERQRQWDTSGLDGVALKLVEGDQRGKNWWK
                     KLEVIRELVIGSKDGADRLDALVYSAIYLKWINTGQIPCYEDGGHHRPNHHAEISRHI
                     FRELERISNRKDTSPQELLVIRKIHPCLPSFKAEFTASVPLTLIRDIAHRNDIPHDLK
                     QEIKHTIQNKLHRCAGPEDLIATAAMLERITKTPGQYNDAFVEQFKIFHHELKDFFNA
                     GSLTEQLEAVKESFDEKGKAKLSSFLECKMALDNFQGTPDILKGNGIDMLINTIHSLN
                     GLREMVTKGLESGIRNDAPDTAIAMRQKWRLAEIGLEDYAFVLMSRYLNALEAAGGAH
                     WLADNVNSMNVNSWNDPIGALVVGIRQLGLSGWKPEECKAIENELLAWQEKRLLEKEG
                     TEDGKTIWALRIKATLDRSKRLIDEYSEALLQIFPPKVEMLGKALGIPENSVRTFTEA
                     EIRAGIIFQISKLCTMLLKAVRTTLGSQGFDVLVPGLVHGTLIQVERIVPGILSSSVE
                     GPIILMVSKADGDEEVTAAGNNIVGVILLQELPHLSHLGVRARQEKVAFVTCEDDDKI
                     ASIKNLEGKYIRLDASPSGVNVIPSSKEDGIKDHPIETSSNGTPMNSVPKSIYASQSV
                     STGDIIPLADADVQTSGAKAASCGTLASLAAASAKVYSDQGVPAAFNVPNGAVIPFGT
                     MELAIKQNNSTQTFESLLEQLETAKMDGGELDKLCNELQNLITSVQLPNQIIESLGKL
                     FESNARLIVRSSANVEDLAGMSAAGLYDSIPNVTLSNPINFGKAVCRVWASLYTRRAV
                     LSRRVAGVSQKEASMAVLVQEMLSPDLSFVLHTVSPTDNDKNVVEAEIAPGLGETLAA
                     GTRGTPWRLSSGKFDGVVKTLAFANFSEEMVVGGLEDGEVLHLTVDYSKKPLTVNSVF
                     RQQLGQKLGAVGLFLEQRFGCAQDVEGCLVGKDLFIVQTRPQPL"
     misc_feature    462..737
                     /gene="LOC139904635"
                     /note="The family 20 carbohydrate-binding module (CBM20),
                     also known as the starch-binding domain, is found in a
                     large number of starch degrading enzymes including
                     alpha-amylase, beta-amylase, glucoamylase, and CGTase
                     (cyclodextrin glucanotransferase). CBM20 is...; Region:
                     CBM20; cl15347"
                     /db_xref="CDD:449530"
     misc_feature    order(495..512,573..575,582..584,588..590)
                     /gene="LOC139904635"
                     /note="starch-binding site 2 [chemical binding]; other
                     site"
                     /db_xref="CDD:99892"
     misc_feature    order(549..551,633..635,669..674,684..686)
                     /gene="LOC139904635"
                     /note="starch-binding site 1 [chemical binding]; other
                     site"
                     /db_xref="CDD:99892"
     misc_feature    2805..3752
                     /gene="LOC139904635"
                     /note="Pyruvate phosphate dikinase, AMP/ATP-binding
                     domain; Region: PPDK_N; pfam01326"
                     /db_xref="CDD:426201"
     polyA_site      4211
                     /gene="LOC139904635"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcgctcacg gggatttgat attttgataa aaccctctct gccacgtcgt cttcaccctc
       61 ctttttatct tcatcatcac tctcaaacat acacaaaaaa attacagtat atacttacaa
      121 acactctttc taatgagcta tacaatcaag taattttgtc attacatttt taagaagata
      181 ttgtgtaaat ggattctctg cgtgtgatta gttcttactc tgccaccaag aatccatcct
      241 ctttaggaac ccatattgta aagaaattta gattcttgaa ttaccataac cggcaaagaa
      301 cttttaaaat tgttgggttt tataagccaa gattgaatct ttatggtggt tatcatttgg
      361 gatttcaaca accaccttct cccattgttt gtgctgtgtc tactgaaacc agagaagaag
      421 agactggtga aacagagatg aagtcgaaat cagctcaagg gaaggtccaa ctcactctgc
      481 ggttggatca tcaggtaaaa tttggtgagc atgttggagt attggggtca acaaaagagt
      541 tcggatcatg gaaaaagaag aaacagatga attggactga gaccggttgg gtagtggata
      601 tggaatgtaa atcgggcgaa actattgaat ttaaatttgt tgttgagcaa atggacaaga
      661 gtatggtttg ggaaggtggt gataaccgtg tcttgaagct gccaaaatct gggagttttg
      721 agatcgtttt tcattggaat atgactaatg aatccgtgaa tctattgcct atagatggta
      781 gagaatatga ggttgaagtg gaaagtgtag gtgagattca agacgagaat ggttcgttga
      841 atctggacgc tgcagggagt ccttttgtgg agaaatggca agggaaggga acttcgttta
      901 tgaaatcgaa cgagcatggt agtagagaaa gacaaagaca atgggataca tcgggccttg
      961 acggggtggc tttaaagtta gtggaaggtg atcagagagg caagaactgg tggaaaaagc
     1021 ttgaagttat tcgtgagcta gtgattggaa gtaaggatgg tgcagatcgt ttggatgctc
     1081 ttgtatattc agccatctat ctaaagtgga taaatactgg tcaaattcct tgctacgagg
     1141 atgggggtca tcacaggccg aatcatcatg ctgaaatttc taggcatata ttccgggaat
     1201 tggaacgaat ttctaacagg aaagatactt ctccgcagga gttgcttgtt atccgcaaaa
     1261 ttcatccatg tctaccatct tttaaggcag aattcactgc atctgttcct ttaactctaa
     1321 tacgagacat cgctcacaga aacgatatcc cacatgacct caagcaagaa attaaacaca
     1381 caatacagaa taagcttcac cgatgtgccg gccctgaaga tttaatagcc actgctgcaa
     1441 tgcttgaaag aatcaccaag accccgggac aatataacga cgcatttgtt gaacagttca
     1501 aaatattcca tcatgaactc aaagatttct tcaatgctgg aagccttaca gaacaactgg
     1561 aggcagttaa agaatctttt gatgaaaagg gcaaagcaaa gctttcatca ttcttggagt
     1621 gcaagatggc tttggataat tttcaaggaa cacctgatat tttgaaagga aacggaatag
     1681 atatgttgat caatacgata cattcgttaa atggtcttcg tgagatggtt acaaaaggtc
     1741 ttgagagtgg tatccgtaac gacgctcctg atactgcaat agcaatgcgc caaaagtggc
     1801 gtcttgctga gattggattg gaggactatg cctttgttct catgagcaga tatctcaatg
     1861 cacttgaagc tgctggtggg gcccactggc ttgcagataa tgtgaactcg atgaatgtta
     1921 actcatggaa tgacccaatt ggtgctcttg ttgttggcat tcgtcagttg ggcttatccg
     1981 ggtggaaacc agaagaatgt aaagcaatcg aaaatgaact tctagcttgg caagaaaaaa
     2041 gacttttgga aaaagaaggt actgaagatg ggaagacaat ttgggcccta aggatcaaag
     2101 ctacattaga tagatctaag aggctgattg atgaatactc tgaagcactt ctccaaatct
     2161 tccctccaaa agtagagatg ctgggcaaag cacttggaat tcctgaaaat agtgtgagaa
     2221 cgttcacaga agcagagatt cgtgctggca taatatttca gatttccaaa ctttgtacta
     2281 tgcttctgaa ggcggttagg accacactcg ggtcacaagg ttttgatgtt cttgttcctg
     2341 gcttggttca tggaacttta atacaggttg aaagaatagt tcctggcata ttatcatcat
     2401 ctgttgaggg acccattatt cttatggtca gcaaagccga tggagatgaa gaggtaacag
     2461 ctgcaggaaa caacatagtc ggagtcattc tactccagga gttgcctcac ttatctcatc
     2521 ttggtgtcag ggcccgacaa gagaaagttg catttgtgac atgtgaagat gatgataaaa
     2581 tcgctagtat caaaaacctc gagggcaaat atataaggct agatgcatca ccgtcaggtg
     2641 tcaatgtcat tccttcttcg aaggaagacg gaattaagga ccatcctatt gagacttcat
     2701 caaacgggac tcctatgaat tccgttccta aatccatcta cgcaagccag agtgtttcga
     2761 cgggcgacat aataccactt gcggatgcag atgtacaaac ttctggcgca aaggcagctt
     2821 cttgtggtac cttagcttct ctagctgcag cttctgctaa agtttatagt gatcagggag
     2881 ttccagcagc ttttaatgtc ccaaatgggg ctgtgattcc ctttggtact atggaacttg
     2941 caataaaaca aaacaactcg acccaaacgt tcgaatcatt attggaacag cttgaaacgg
     3001 ccaaaatgga cgggggagag ctcgacaaat tatgcaacga actgcaaaat ctgatcacat
     3061 ccgtacagct tccgaatcaa atcattgaaa gtttagggaa attgtttgag agtaatgcac
     3121 gattgatcgt acgatcaagt gccaacgtgg aagatttagc cggaatgtct gctgcagggc
     3181 tatacgactc gatccctaac gttaccctct cgaatccaat caatttcggt aaagccgttt
     3241 gtcgtgtatg ggcctcgtta tacacacgac gagcggtttt aagtcgtaga gttgcaggtg
     3301 tgtcacaaaa agaagcttca atggcggttt tggtccaaga aatgctttca ccggaccttt
     3361 catttgtgct ccatacggtc agcccaacgg ataacgacaa aaacgtggtg gaagcggaga
     3421 tcgcaccggg gctcggggag acgttagccg ccgggacccg cggtacaccg tggcggttat
     3481 catccgggaa atttgacggg gtggttaaga cacttgcgtt tgcgaatttt agtgaggaga
     3541 tggtggtggg tggtttggaa gatggtgaag tactacattt gacggttgat tatagcaaga
     3601 agccgttgac ggtgaactcg gtttttcggc aacagttggg gcagaaactt ggtgctgtgg
     3661 gtttgtttct tgagcagagg tttgggtgtg ctcaagatgt tgaagggtgt ttggttggta
     3721 aagatttgtt cattgttcag actcggcctc aacccttgta aagattatta agtttgtgac
     3781 agtgttaatg cttgttgcta tgttattaca aatggaatat ggatatggaa gtataataag
     3841 actagtgtgt aaacagaaga tcacactttg tgctagtata taataaatgg aagggtttgg
     3901 ttagtgaaag ttcgtgcgtg tccccgactt atttgtttgc ctttggtgct tgtgggtagg
     3961 gtaaagaacc gaactctagt cgagcagtaa gaagttgagt ttgggcttgt tcgattttta
     4021 ctatctttga agtaaactcg aactcgataa taaatttcat ctaatattcg agttcgaact
     4081 tgaatatttt tttatgttcg aactcgaact cgaactcgat attcagttta atttttatgt
     4141 ttgatgatca tactttagct cgaaatcgag ctcaattaag gtcgactaat aaattcaaac
     4201 ttgggcgtgt t
//
LOCUS       XM_071886570            3908 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protease Do-like 7
            (LOC139904636), mRNA.
ACCESSION   XM_071886570
VERSION     XM_071886570.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3908
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3908
                     /gene="LOC139904636"
                     /note="protease Do-like 7; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139904636"
     CDS             49..3291
                     /gene="LOC139904636"
                     /codon_start=1
                     /product="protease Do-like 7"
                     /protein_id="XP_071742671.1"
                     /db_xref="GeneID:139904636"
                     /translation="MDDSSEKLDDDQSMENDSPLNDNNHATAEDWRKALEKVVSAVVV
                     IRTTACRAFDTESASSGFATGFVVDKKRGIILTNRHVVKPGPVVAEAMFVNREEIPVY
                     PIYRDPVHDFGFFRYDPAAIQFLSYEEIPLAPEAACVGLEIRVVGNDSGEKISILSGT
                     IARLDRDAPHYKKDGYNDFNTFYIQAASGTKGGSSGSPVIDRQGRAVALNAGGKLSSS
                     SSAFYFPLERAVRALSFLQKGRDSCQDKWEAVMIPRGTLQTTFVHKGFEETRRLGLQS
                     ETEQLVRHASPLTETGMLVVDSVVPGGPAFKHLESGDVLVRMNGEVITQFLKLETSLD
                     DSVGLDVELEFQRGGTPFTVHLVVQDLHSITPNCFLEVSGAVIHPLSYQQARNFRFEC
                     GLVYVSDPGYMFYRAGVPRHAIIKKFAGVDISHLEDFINALSKLCRGARVPLEYITYT
                     DRHRKKSVLVTIDRHEWYASPQIYTRDDGSGIWIGKLALPPSSHLMAFKGVEQGPTSS
                     RALNQDDSDQTTNLDVGMDTISSEHVNDDDTRAQVETDNGTTVSENLSANGIVIADIC
                     DERSPGDTDVSGDHGTSASFVNASVAERVIEPTLVMFEVYVPSSCMLDGVHGQHYRGT
                     GVIIHHSEKLGLVAVDKNTVVISACDVILSFAAYPVEVPGEVVFLHPVDNYAIIAYDP
                     SALDLGPTGVSVVRAAELLPEPALRRGDSVYLVGLSRSSQAISRKSIVTNPCLAINCS
                     SADTPRYRATNMEVIELDTDFGSTFSGVLTDEHGRVKALWASFSNQLKYGTKSSQDAQ
                     FVRGIPIHSVSQVLEKIISNTRGPTLLINGIRRPMPLVRVLEVELYPILLSKARNFGL
                     SAIWIRALVEKDPVRRQVLRVKGCLAGSKAENLLEEGDMVLAINKNPVTCFKDIDDAC
                     NALDLSDDMEGKLELTIFRQGREIELLVGTDIRDGNGTTRVINWCGCVVQDPHPAVRA
                     LGFLPKEGHGVYVTRRSNGSPVHRYGLHSLRWIVEVNGKPTPNLDAFVNVAKEIEDGE
                     FVRVRTINLSGKPQVLTLKQDLHYWPTWELRFDPETSIWHRKTIKSLATV"
     misc_feature    229..1131
                     /gene="LOC139904636"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; Region: DegQ;
                     COG0265"
                     /db_xref="CDD:440035"
     misc_feature    856..1122
                     /gene="LOC139904636"
                     /note="circularly permuted first PDZ domain (PDZ1) of
                     Saccharomyces cerevisiae pro-apoptotic serine protease
                     Nma111p and related domains; Region: cpPDZ1_ScNma111-like;
                     cd06786"
                     /db_xref="CDD:467625"
     misc_feature    order(859..882,934..936,943..945,1033..1038,1045..1047)
                     /gene="LOC139904636"
                     /note="peptide binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467625"
     misc_feature    1135..1356
                     /gene="LOC139904636"
                     /note="canonical PDZ domain; Region: PDZ_canonical;
                     cl49608"
                     /db_xref="CDD:483948"
     misc_feature    1915..2376
                     /gene="LOC139904636"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...; Region:
                     Tryp_SPc; cl21584"
                     /db_xref="CDD:473915"
     misc_feature    2599..2874
                     /gene="LOC139904636"
                     /note="circularly permuted PDZ domain of Arabidopsis
                     thaliana putative protease Do-like 7 (DEGP7) and related
                     domains; Region: cpPDZ_AthDEGP7-like; cd06787"
                     /db_xref="CDD:467626"
     misc_feature    order(2605..2628,2671..2673,2680..2682,2776..2781,
                     2788..2790)
                     /gene="LOC139904636"
                     /note="peptide binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467626"
     misc_feature    2908..3153
                     /gene="LOC139904636"
                     /note="second and fourth PDZ domains (PDZ2 and 4) of
                     Saccharomyces cerevisiae pro-apoptotic serine protease
                     Nma111p and related domains; Region: PDZ2-4_Nma111p-like;
                     cd06719"
                     /db_xref="CDD:467617"
ORIGIN      
        1 acacttaaac cctaactgat cagatactca aaattagggt tttaatacat ggatgattca
       61 tcggagaaat tagacgatga tcagtcaatg gaaaacgatt ctccattgaa cgacaacaac
      121 catgcgactg cagaagattg gagaaaagcg ctggaaaaag ttgtttcggc ggtggtagtc
      181 atccgtacga ctgcgtgtcg agcttttgat actgaatccg caagttcagg ttttgctaca
      241 ggctttgttg ttgataagaa gcgtggaatt attctaacta atcgccatgt tgttaaacca
      301 ggtcccgtgg tagcagaagc tatgtttgta aatcgtgaag agattccggt ctatccaatt
      361 taccgagacc ctgttcacga ttttggattc tttcgctatg atcctgctgc aattcagttt
      421 ctaagctatg aagagattcc tcttgctcct gaagctgctt gtgttggatt ggaaattaga
      481 gttgttggaa atgatagcgg agagaagatc tcaattttgt ctggtaccat tgctcgtctt
      541 gacagggatg ctccacatta taaaaaggat ggctacaatg atttcaatac cttctatatt
      601 caggcagctt caggtactaa aggtggttca agtggttccc cagtgattga tcggcaagga
      661 agggcagttg cattaaacgc tggcggcaag ttgtcttcta gttcttctgc attttatttt
      721 cccttagaac gagcagtgag ggctttaagt ttcttacaaa agggaagaga ttcttgtcaa
      781 gataagtggg aggctgtcat gatacctcgt gggacactcc agacaacctt tgtgcacaaa
      841 ggatttgaag aaacccgccg gcttggtttg caaagtgaaa cagagcagtt ggttcgtcat
      901 gcatctccct taaccgaaac tggaatgctt gtcgtggatt ctgttgtgcc aggtggccca
      961 gcttttaaac atttggagtc aggtgatgtg cttgtccgaa tgaatgggga ggtgatcact
     1021 caatttctga agctggagac ttcacttgat gatagtgtgg gcctcgatgt cgagttagag
     1081 tttcaaaggg gtggcacacc ttttactgtt catttggttg ttcaggattt acactccata
     1141 actcctaact gcttcttgga agttagtgga gcagtgatac atcctctctc ctaccagcag
     1201 gctaggaact ttcgttttga atgtggtctt gtatatgtgt ctgaccctgg ttacatgttt
     1261 tatcgagcgg gggtcccacg gcatgccatt atcaaaaaat ttgctggcgt agacatttca
     1321 catctagaag acttcattaa tgctctatct aagctctgta gaggagctag agttccattg
     1381 gaatacataa cttacacaga tcgccatagg aagaagtccg tccttgttac tatcgatcgt
     1441 catgagtggt acgcttcccc tcagatatat actcgtgatg acggttctgg aatttggata
     1501 ggaaaactag cactgcctcc tagttcccat ctaatggcct tcaaaggtgt tgaacaaggc
     1561 ccgacgagca gtagagcatt gaaccaagat gacagtgatc aaacgactaa tcttgatgtt
     1621 ggtatggaca ctattagctc cgaacatgtt aatgatgatg acacacgtgc tcaagtggaa
     1681 actgacaatg gaaccacagt ttctgaaaat ctatctgcta atggaattgt gattgctgac
     1741 atatgtgatg aaagatctcc aggagacaca gatgtgagtg gtgatcatgg tacatcagca
     1801 agctttgtta atgcttctgt tgccgagcgt gtaatagagc ccactcttgt catgttcgag
     1861 gtttatgtgc catcatcatg tatgcttgat ggtgtccacg gacagcatta tcgtggaaca
     1921 ggtgtgatta tacatcattc agaaaaacta gggttggttg cagttgacaa gaataccgtt
     1981 gttatatcag catgtgatgt cattctttct tttgccgcat atccagttga agttccagga
     2041 gaggtggttt ttctccatcc tgttgataat tatgcaataa ttgcgtatga cccttctgca
     2101 ttggatttgg gacccaccgg tgtttcagta gtgcgagctg ctgaacttct tcctgaacct
     2161 gcattgcgcc gtggagatag tgtttatcta gtgggattaa gtaggagttc acaagcaata
     2221 tccaggaaat caattgttac caacccatgt ttggcaataa actgcagctc agctgatact
     2281 ccacgttata gagcaaccaa catggaagta atagagctag acactgactt tggtagcact
     2341 ttttctggag tgctaactga tgagcatggt agggttaaag ctctatgggc gagcttttca
     2401 aatcagctga agtatggtac aaagtcatct caagacgctc aatttgtgag aggtatccct
     2461 atacattcag tcagccaagt ccttgaaaaa attatatcaa acacaagagg accaaccctt
     2521 cttataaatg ggatcagaag accaatgcct cttgttaggg ttttagaggt tgaattatat
     2581 cctattttac tttccaaggc tagaaatttt ggactcagcg ccatctggat tcgagctctt
     2641 gtagaaaagg atcctgttag acgtcaagtt ttacgggtca aaggatgttt agcgggatct
     2701 aaagctgaga atttacttga agaaggtgat atggtccttg caatcaataa aaatccagta
     2761 acatgtttta aggatatcga tgatgcgtgt aatgccttgg atctgtctga tgacatggaa
     2821 ggaaaacttg aattgactat ctttcgtcag ggacgtgaaa tcgagcttct tgtgggaaca
     2881 gatataagag acggcaacgg taccacgcgt gtaattaatt ggtgtggatg tgttgtacaa
     2941 gatcctcacc cggcagttcg ggccctcggg ttcctgccta aagaagggca cggggtatat
     3001 gtcacaaggc gttcaaatgg gagtcctgtg catagatatg gcttacattc tcttcggtgg
     3061 attgtggaag ttaatggaaa gccaactccg aacttggatg cttttgttaa tgtcgcaaag
     3121 gaaattgaag atggagaatt cgttcgtgta aggactatca atttgagcgg gaagccgcaa
     3181 gtgctgacat tgaaacagga cctgcactac tggcctacgt gggagctaag gtttgatcca
     3241 gaaacttcaa tttggcaccg aaagaccata aaatctttag caactgttta gacttcaacg
     3301 gatacaaaat taagattctg aagactcgtt ttagagctgg tgtattcaag attattctgg
     3361 gttgcccatt taactatgta tgggtgttat ctcggtagtg gttattttat tgtttgcgag
     3421 gttggtcctc agggatatgt acatggtgac atacatttac atcagttatt ggtagcattg
     3481 ataatttaat gtaaattctt ccaaacttgt aagttggtac ttggtaggct acttctcatc
     3541 accgaatgca tatatatttg cttttatgtc aacattttgt atgatgattc tgaagtttga
     3601 tagaagggaa gcaacctaga aactggatcg aaagacgtaa ctatcagatc aaacagacat
     3661 ttataacaag cttcaacaaa actgtatatg gaatttggga tttagcaact gctttccata
     3721 atcatcaaat ctcgcttaaa tcggcattgt agaacctatc aatctattca ttctgtaagc
     3781 ttcaacacat gagataaagt tgagaattag cacccttctg tgaatctggt caacaatgtg
     3841 aagtggaagc atatagacgc tggcaatgac tttctctttg attacttcat ttggcaagag
     3901 gaaaaaga
//
LOCUS       XM_071886571            1779 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thylakoidal processing
            peptidase 1, chloroplastic-like (LOC139904637), mRNA.
ACCESSION   XM_071886571
VERSION     XM_071886571.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1779
                     /gene="LOC139904637"
                     /note="thylakoidal processing peptidase 1,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139904637"
     CDS             358..1470
                     /gene="LOC139904637"
                     /codon_start=1
                     /product="thylakoidal processing peptidase 1,
                     chloroplastic-like"
                     /protein_id="XP_071742672.1"
                     /db_xref="GeneID:139904637"
                     /translation="MALRFTVSYSGYVAQNLASVTGKSNTSRIFHEVFARPRIFQTPE
                     RDSATVYRRPSTASSVSSYASIAGELLGIEGCSRPSPIIVGLISLVKSTAVGGGSGGG
                     SGGLGGLGISPLKASTIIPFLQGSKWLPCNEINSSEVDKGGTRTMKKNETQTQTQASS
                     ECVKRCDAVSGKQAVVSERNNWLSKMLNVCSDDAKAAFTALSVTILFRSQLAEPRSIP
                     SASMSPTLDAGDRILSEKVSYIFRRPEVSDIVVFKAPPILQQIGYSSGDVFIKRIVAK
                     AGDCVEVREGKLLVNGVAQDEEFILEPLEYEMKPMIVPEGYVFVMGDNRNNSFDSHNW
                     GPLPIENIVGRSVFRYWPPAKISDTIYEVRRGLAHS"
     misc_feature    937..1410
                     /gene="LOC139904637"
                     /note="Signal peptidase, peptidase S26; Region:
                     Peptidase_S26; pfam10502"
                     /db_xref="CDD:431321"
     polyA_site      1779
                     /gene="LOC139904637"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcacacataa tttgggctca agtttttatt ttcctttttc ttcttttgtt cacctctcat
       61 tctccaccac atccctgatc cctctccgtc acttctcgga gaggaaccac aaaaaaaaaa
      121 aaatcaattt caaaaactag ggtttccaat ttcatcaatt tcacccaaat ttaatcttcc
      181 atttcatcaa ttccacctta atctaactct tcaattcaac cctacgctct caactcaaca
      241 aattcgttca attccgatgg gatcgcttgt tttataagtt ttttattcac atcacaaacc
      301 ctaatttccg aacaagaaat ttttcacatc ttcatcatct taatcaaatt tgctattatg
      361 gcgcttcgat ttaccgtttc ttattccggt tacgtggctc aaaacctagc ctccgtcacc
      421 ggaaaatcca atacaagccg gatcttccac gaggtatttg ctcgtcctcg tatttttcaa
      481 acacctgaac gtgattcggc taccgtttat cggcggccgt caacggcgtc gtctgtctcg
      541 tcttacgcgt cgatcgccgg tgagttgtta gggattgaag gttgctcaag accttccccg
      601 attattgttg gattgatctc gttagtaaag tcaacggcgg ttggtggtgg ctctggtggt
      661 ggttctggtg gtttaggagg gttagggata tcgccgttga aggcgagtac gatcataccg
      721 tttttgcaag gatccaagtg gctcccctgt aatgagatta atagtagtga ggtagataaa
      781 ggtggtacta gaactatgaa gaagaatgag actcaaactc agactcaggc ttcaagtgaa
      841 tgtgtgaaaa gatgcgatgc tgttagtggt aaacaagcgg ttgttagtga aaggaacaac
      901 tggctttcta aaatgttgaa tgtatgttct gatgatgcta aggctgcatt tactgctttg
      961 agtgttacta tattgtttag atcgcagttg gcggaaccta gatcaattcc ttcagcttcc
     1021 atgagcccta ccctggatgc tggtgatcga attttgtctg aaaaggtttc ttacatcttt
     1081 cggaggccag aagtgtcaga tattgttgta tttaaggctc ctcccattct tcagcaaatt
     1141 ggctatagtt ctggtgatgt atttataaaa agaattgtag cgaaggctgg agattgtgtt
     1201 gaggttcgcg aaggtaagct gttggtgaat ggtgttgctc aagatgagga gttcatttta
     1261 gagcctttag aatatgaaat gaaaccaatg attgtgccag aaggctatgt gtttgtgatg
     1321 ggcgacaatc gtaacaacag ttttgactcg cacaactggg gtccccttcc tatagaaaac
     1381 attgtgggta ggtctgtgtt tcgatattgg ccaccggcaa aaatctcgga cacaatatat
     1441 gaagtaagaa gaggtcttgc acattcttga caactgtcat ccttcctatc tacccagagg
     1501 gtgaatcttg aatgactcct ttttttgaca atttggcttt tgtccctctt tttgctcacc
     1561 atcaccgagc gttgtgaata ctttgcttcg ttgctgcagt cctccttcat gtctgttttt
     1621 atttgggacc ggacaatcgt gtccatctgt ttgttattta actgcgttga tggccatcaa
     1681 tggcctgctt tagggttcgt tattttgctt ctttaactgt cgatgaatgt tgaattttat
     1741 catctttgca atttagtaaa gattaaaata ttgtaatca
//
LOCUS       XM_071886572            1164 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139904639), mRNA.
ACCESSION   XM_071886572
VERSION     XM_071886572.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 55% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1164
                     /gene="LOC139904639"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139904639"
     CDS             1..1164
                     /gene="LOC139904639"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071742673.1"
                     /db_xref="GeneID:139904639"
                     /translation="MEQPPGFVAQEESGKVCRLRKAIYGLKQSPRAWFGKFNTVVRDF
                     GLKRSAYDHSVFFASSNSGCILLVVYVDDIVITGSDKEGINRLKTFLSTQFQTKDLGP
                     LKYFLGIEVSRNKRGIFLSQRKYCLDVLTDSGLIDAKTCEAPMIPNIKLKADDGELLI
                     NPEKYRRIVGKLNYLTLTRPDIAFPVSVVSQFLSSPRTSHWDVVTHILKYLKGTPGRG
                     ILYQNHGHHTIEGFSDADYNGDPTTKRSTTGYCVFVGGNLVSWKSKKQNVVSHSSAES
                     EYRAMAQTTCELIWVRNLLGEIGFAQSEPMNLWCDNKAAIHIASNPVFHERTKHIEAD
                     CHFTREKLEEGIIKIPHVKSKEQLADIFTKALPGNCICQFCGKLGMINIYAPA"
     misc_feature    <1..438
                     /gene="LOC139904639"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    688..1104
                     /gene="LOC139904639"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(700..711,814..822,829..831,931..933,1009..1011,
                     1090..1092)
                     /gene="LOC139904639"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggagcaac cacctgggtt tgttgctcag gaggagtctg gtaaagtatg caggttacga
       61 aaagcaatat atggtttgaa gcaatcccct cgtgcttggt ttgggaagtt caatactgtg
      121 gtaagggact ttggcttaaa aagaagtgca tatgatcact cggtattctt cgcttcatca
      181 aactctgggt gcattttact tgttgtttat gtcgatgata ttgtaattac cgggagtgat
      241 aaagaaggaa ttaacagatt gaaaacattt ttaagtaccc aatttcaaac aaaggatctt
      301 ggtcccttaa aatattttct tggtattgaa gtctctcgaa acaaaagagg cattttccta
      361 tcccagagaa agtattgtct agatgtactc actgattctg gtttgattga cgcaaaaact
      421 tgtgaagcac caatgatacc aaatataaag ttgaaggcgg atgacggaga acttcttatc
      481 aaccctgaaa agtatagaag aattgtcggc aagttgaatt atcttaccct cactcgtcct
      541 gatattgcct ttcccgtgag tgttgttagt cagttcttat catctccaag aacctcacat
      601 tgggatgttg tcactcatat tttgaagtac ttgaaaggta ctcctggtcg tggcatctta
      661 taccagaatc atggtcatca cacaattgag ggtttttctg atgctgatta taatggtgat
      721 cccacaacta aaaggtctac aacaggttac tgtgtcttcg ttggaggaaa tcttgtatct
      781 tggaaaagca agaaacagaa tgtggtatct cattctagtg cggaatccga atatcgagcc
      841 atggcacaga caacttgtga acttatatgg gttcgtaatc ttcttggcga gattggcttt
      901 gctcagtccg aaccaatgaa cttgtggtgt gataataaag cagccattca tattgcaagc
      961 aaccctgtct ttcatgaaag aaccaagcat atagaagctg actgtcattt cactcgagaa
     1021 aaattagaag aagggattat caaaataccc catgtcaaaa gtaaagaaca gttagccgat
     1081 atattcacca aagcattacc cggaaattgt atctgtcagt tttgtggcaa gctgggcatg
     1141 atcaatatct atgctccagc ttga
//
LOCUS       XM_071886573             696 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904640), mRNA.
ACCESSION   XM_071886573
VERSION     XM_071886573.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..696
                     /gene="LOC139904640"
                     /note="uncharacterized LOC139904640; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904640"
     CDS             24..485
                     /gene="LOC139904640"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742674.1"
                     /db_xref="GeneID:139904640"
                     /translation="MACVNMQVKNEKQGCYMGPRISFSNDFIDSNHHQINNTYTEAPV
                     SSDFEFSVPTFSSNSADEVFFKGKMSPLKENVITLRDELLASHDDDDDDHHHHHGMFN
                     STKNSSGWWKEKFGLRKSQNGKNVGGLETIDEAKIKPSFFSPNFTGSNRYK"
ORIGIN      
        1 ttgaacacaa cacaaaatct tcaatggcat gcgtaaacat gcaagtaaaa aatgaaaaac
       61 aaggatgtta catgggccca agaatttcat tctcaaatga tttcatagat tcaaaccacc
      121 atcaaattaa caacacttac acagaagctc ctgtttcttc cgatttcgag ttttcggttc
      181 ctactttctc ttcaaactct gcagatgaag tcttttttaa aggcaaaatg tcaccattga
      241 aagagaatgt gattacactt agagatgagc ttcttgcaag ccatgatgat gatgatgatg
      301 atcatcatca tcatcatggt atgttcaata gcactaagaa ttcatcaggt tggtggaaag
      361 aaaaatttgg gttgagaaaa agtcaaaatg gaaagaatgt tggtggcttg gaaaccattg
      421 atgaagcaaa gatcaaacct agttttttca gtcctaattt cacaggaagc aatcgttata
      481 agtgatttat gcatgaagat taattttaag gaattaagca gtttattaac tattgagggt
      541 gaagggttat ttttttttcc tctttttaag ggtatttttc attttttatg ttaactaata
      601 ttaatatttc taggaagcta gtattagttt aagaaattaa tgtgtgtaga ttagtgattt
      661 aactgttgca gtattctgta taaatatttg cagttg
//
LOCUS       XM_071886574            1170 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139904641), mRNA.
ACCESSION   XM_071886574
VERSION     XM_071886574.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 40% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1170
                     /gene="LOC139904641"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139904641"
     CDS             1..1170
                     /gene="LOC139904641"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071742675.1"
                     /db_xref="GeneID:139904641"
                     /translation="MGFRDPNYPDHVCRLNKSLSLYGLKQAPRAWYERFANHVFSIGF
                     IHSRCDHSLFVYKRGKDIAYILLYVDDIILVTSSDKLRATIMQHLSTKFAMKDLGHLS
                     DFLGISVQQTPTGLFLNQSKYAKEIVARASMSSCKPSHTPVNTKSKLSSHIGNPYSDP
                     SLYRSLAGALQYLTFTRPDISYSVQQVCLHMHNPHDTHMAALKQIIRYIQGTIDYGIH
                     MHKTNTTSLISYTDADWAGCPDTRRSTSGYCVYLGDNLISWSSKRQPTISRSSTEAEY
                     RGVANVVSESCWLRNLLLELHHPLNKATIVYCDNVSTIYLASNPIQHQRTKHIELDIH
                     FVREKIARGQFRILHVPSRYQIADIFTKGLPRLLFDDFRSSLNVRQHPDSTAGPY"
     misc_feature    <4..429
                     /gene="LOC139904641"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    688..1098
                     /gene="LOC139904641"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(694..705,808..816,823..825,925..927,1003..1005,
                     1084..1086)
                     /gene="LOC139904641"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgggattcc gggaccctaa ttatcccgat catgtttgtc gcttaaataa atcactatca
       61 ctatatggtc tcaaacaagc gccacgggca tggtacgaac gatttgccaa ccatgtcttt
      121 tctatcggat tcatacatag ccgttgtgat cactcgctat ttgtctataa aaggggaaaa
      181 gacattgcat atattctact atacgtggac gacatcatct tagttacttc ttctgacaaa
      241 cttcgagcta ctattatgca acatctatcg actaaatttg ccatgaaaga tctcggtcac
      301 ttaagcgatt ttttgggtat ctctgtacag caaacaccaa ctggcttatt tttaaatcag
      361 tccaaatacg ccaaagaaat agtagcacgt gcatcaatga gctcatgcaa accttcacat
      421 accccggtaa acacaaagtc gaagctaagt agccacattg gtaacccata ttctgaccca
      481 tctttatata gaagtttggc gggtgctctg caatatctca cttttacaag acccgacatc
      541 tcatactccg tgcaacaagt gtgtctacac atgcacaatc ctcatgacac gcatatggca
      601 gcattgaaac agataattcg atacattcaa gggacgattg attatgggat acacatgcat
      661 aaaaccaaca cgacatcact catctcctac acagacgccg attgggccgg ttgccccgac
      721 acccgtagat caacatccgg atattgcgtg tatcttggtg acaacttaat atcttggtcg
      781 tctaaacgac aacccactat ttcacgctct agtaccgaag cggagtaccg aggcgtcgcc
      841 aacgtagtct ctgaatcatg ttggctacgc aacttattac ttgaactaca tcatcctctc
      901 aacaaagcca ccatcgttta ttgcgacaat gtgagtacga tatatcttgc aagcaatccg
      961 atacaacatc aacggactaa gcacattgag ttagacattc actttgttag agaaaagata
     1021 gctcgtggac aatttcgtat tctacacgtt ccgtctcgtt atcagattgc agacattttt
     1081 actaaaggcc taccacgact actatttgat gattttcgct ccagtctcaa cgttcgtcaa
     1141 catcccgatt cgactgcggg accctattag
//
LOCUS       XM_071886576            1943 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides inositol transporter 1
            (LOC139904642), mRNA.
ACCESSION   XM_071886576
VERSION     XM_071886576.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1943
                     /gene="LOC139904642"
                     /note="inositol transporter 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 26
                     Proteins"
                     /db_xref="GeneID:139904642"
     CDS             119..1606
                     /gene="LOC139904642"
                     /codon_start=1
                     /product="inositol transporter 1"
                     /protein_id="XP_071742677.1"
                     /db_xref="GeneID:139904642"
                     /translation="MTIETDPGSSGYIDAGVDRKITYFSNTYVLGLTVIAGIGGLLFG
                     YDTGVISGALLYIRDEFEAVDQSSFLQETIVSMALVGAMIGAATGGWINDAYGRKKAT
                     LLADVIFALGSFVMAAAWNPYIIILGRLFVGLGVGVASVTAPMYIAEAAPSEIRGGLV
                     STNVLMITTGQFLSYLVNLAFTEVRGTWRWMLGVAAVPAVIQFFLMLLLPESPRWLYM
                     KKRKNDAIVVLSKIYDPYRLEEELDQLSSALDEEHQRKNAISYWDVFRIKEIRLAFLA
                     GAGLQAFQQFTGINTVMYYSPTIVQMAGFRSNQLALLLSLIVALMNAGGTIVGIYLID
                     HFGRRKLALSSLTGVILSLILLSVSFYLESIGTASIGWLAILGLALYIAFFAPGMGPV
                     PWTVNSEIYPESYRGICGGMSATVNWVSNLIVAQSFLTIAELVGTSVTFLILAAIGVA
                     AFVFVVAFVPETKGLTFEEVEKIWKERAWGSSAHLDPLVQNGSEA"
     misc_feature    221..1459
                     /gene="LOC139904642"
                     /note="H(+)-myo-inositol cotransporter and similar
                     transporters of the Major Facilitator Superfamily; Region:
                     MFS_HMIT_like; cd17360"
                     /db_xref="CDD:340918"
     misc_feature    order(245..247,257..259,608..610,617..622,629..631,
                     968..973,983..988,995..1000,1082..1084,1271..1276,
                     1283..1288,1298..1300,1367..1372,1379..1381)
                     /gene="LOC139904642"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:340918"
ORIGIN      
        1 gaaataaatc taaatgtttt ggttgtgatc agtacccaca actattttta taaattgcac
       61 accaagtgtt cgattatttg cctgagtgac tctatagttt taaaaaaaaa aggaaaagat
      121 gacgatagaa acggatccag ggagttcagg gtacatagat gccggagttg ataggaaaat
      181 aacatatttt agtaatactt atgttttggg tttaactgtt attgctggaa ttggtggtct
      241 ccttttcgga tatgatactg gagttatatc aggagctctt ctgtacattc gtgatgaatt
      301 cgaggcagtt gatcaaagta gctttctaca ggagacaatt gttagcatgg ctttagttgg
      361 tgcaatgatt ggagctgcaa ctggcggctg gataaacgat gcatatgggc gtaaaaaagc
      421 tactcttctt gcagatgtta tatttgcatt gggttcgttt gttatggctg ctgcatggaa
      481 tccttatata attatattag ggcgcctttt tgttggttta ggggtaggtg tagcatcggt
      541 tactgctcca atgtatattg cagaagcggc cccatcagaa atacggggcg gtcttgtaag
      601 caccaacgtg ctcatgataa cgaccggaca atttctttct tacctcgtca atcttgcttt
      661 caccgaggtt cgtggaacat ggcgatggat gcttggagta gctgctgtgc cagcagttat
      721 ccaatttttc ttgatgttgt tacttcctga atctccacgt tggctttaca tgaagaagag
      781 aaaaaatgat gcaattgttg tactgtcaaa aatttatgat ccgtatcggt tagaagagga
      841 acttgaccag ctttcatcgg ctttagacga agaacatcag cgcaagaatg caatcagtta
      901 ctgggatgtt ttcagaatta aagaaatcag acttgcgttt cttgcaggag ctggtcttca
      961 ggcgtttcaa caattcactg gcatcaacac agtcatgtac tacagtccaa ccatagttca
     1021 gatggccggg tttcgttcaa accaattagc ccttctacta tccctcatcg ttgcattaat
     1081 gaatgccggt ggcacgattg tcggaatcta cctcatcgac catttcggcc gtcggaaact
     1141 agctctcagc agcttgacag gtgtcatcct ctccttaatt ctcctctcag tttcttttta
     1201 cctagaatca attggtaccg ccagcattgg ttggctagct attctcgggt tagctcttta
     1261 tattgccttt tttgcccctg gaatgggccc cgttccatgg acagtgaatt cggaaatata
     1321 tcccgaatca tatagaggaa tatgtggtgg aatgtcagcc acagtcaatt gggtatcaaa
     1381 cttgattgtc gctcaaagct ttttaacgat tgctgaactc gttgggactt cggtgacgtt
     1441 tttgatactg gctgctattg gtgttgctgc gtttgttttt gtggttgcgt ttgtgccgga
     1501 gacaaaaggg ttgacttttg aagaagttga aaaaatatgg aaggagagag cttggggaag
     1561 tagtgctcat ttggatcctc tcgtacaaaa tggaagtgag gcgtaaagaa aaacgattat
     1621 tttcgtgaag tagtatttgt ttggatgtgt tcgattggac ttttcgttgt ctattattgt
     1681 tttgtggttt tgatttatgg gcataaaatc ttgtcctaac taatgctggg tgtcatctat
     1741 gatccatcca agatatattg ttaaaaagtt tgttatttga taaagttgta ggtggttaca
     1801 tgtgttatta gaccaacttt taggtcagtt atcagaagtt tctatttcta ttaatctatt
     1861 atttctcttg tatgtggtgg gaaattaaaa tatggttttg atcagttggg tcttatgaca
     1921 ttttggataa ataattgagg tag
//
LOCUS       XM_071886577            1855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450
            CYP82D47-like (LOC139904643), mRNA.
ACCESSION   XM_071886577
VERSION     XM_071886577.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1855
                     /gene="LOC139904643"
                     /note="cytochrome P450 CYP82D47-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904643"
     CDS             49..1620
                     /gene="LOC139904643"
                     /codon_start=1
                     /product="cytochrome P450 CYP82D47-like"
                     /protein_id="XP_071742678.1"
                     /db_xref="GeneID:139904643"
                     /translation="MDLFHFQDEKYSSTLFVLSLTIILSAIIYKITRKNTTSAPEASG
                     AWPVIGHLNLFSGSSDLPHVALSSMADRYGPIFTVWLGIRRVLVVSNWEIAKEIFTTH
                     DVAVSDRPKYLAAKILGLNYASFSFTPYGPYWREIRKIISLEVLSSSRLEKLKFVRVS
                     ELENSIKSLRNFWSEKRDEEKGKVMVDMQKWFGELNMNIILKIVTGKRLGEDEKEIKR
                     RRELFREWFHYTGLFVVADAFPFLGWLDLGGHERTMKRIASELDSMVGTWLDEHRNER
                     ASDESTKEKDFIDVMISAVKGDNLVGYNKDTIIKATSMTLIAGGIDTMSVMLTWTLSL
                     LLNNRSTLKLAIEELDMHVGKGKQVNESSINNLVYLKAIIKEALRLYPAGFLGGPRAF
                     SENCVVAGYNVPKGTWLLINMWKLHRDPNIWSDPCEFKPERFLTPKHKDVDVIGADYE
                     LIPFGAGRRSCPGIALSLQMLPMVIATVLQNFELSTPNDEDIDMTASIGMTNAKATPL
                     QVLIAPRFPERQIDV"
     misc_feature    268..1593
                     /gene="LOC139904643"
                     /note="cytochrome P450 family 82; Region: CYP82; cd20654"
                     /db_xref="CDD:410747"
     misc_feature    order(373..375,448..450,460..462,484..486,646..648,
                     994..996,1003..1008,1015..1020,1195..1197,1207..1212,
                     1216..1218,1405..1416,1423..1437,1444..1449)
                     /gene="LOC139904643"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410747"
     misc_feature    order(724..726,736..738,808..810,991..993,1000..1005,
                     1210..1212)
                     /gene="LOC139904643"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410747"
ORIGIN      
        1 ttatatatac acacatacgt acacttaaac ttttcactta tttgcaatat ggacctcttc
       61 cattttcagg atgaaaagta ctctagtact ctctttgttc taagtttaac aataatatta
      121 tcagcaatca tctataaaat cacaagaaaa aacactacta gtgcacctga agcaagtggt
      181 gcatggcctg ttatcggcca cttaaacctt tttagtggtt catccgatct tcctcatgta
      241 gctttgtcat ctatggctga ccgatatgga cccatcttca cggtctggtt aggcatacgt
      301 agagttttgg tggtgagtaa ttgggagatt gctaaagaga tcttcacaac tcatgatgtg
      361 gctgtttctg accgtcctaa atatctcgct gcaaagattt taggactaaa ctatgcctcg
      421 ttttcgttca ctccttatgg tccctattgg cgggaaatac gtaaaataat ctctttagag
      481 gtgttgtcta gtagtcggct ggagaagctt aagtttgttc gagtgtctga actagaaaac
      541 tcgattaaaa gcttgcgtaa cttttggagc gaaaaaagag atgaggaaaa agggaaagtt
      601 atggttgata tgcaaaagtg gttcggggaa ttaaatatga atattatcct taaaatagtt
      661 actggaaaac ggttaggtga agatgagaag gagattaaaa ggcgccgaga gttatttagg
      721 gaatggtttc attatacggg gctttttgtc gtggcggatg cttttccttt tttaggatgg
      781 ttagatttgg gtggacatga gagaaccatg aaaagaattg catctgaact cgactcgatg
      841 gtggggacat ggttagatga gcatcgaaac gagagggctt ctgatgagtc tacaaaggag
      901 aaagacttca ttgatgtgat gatatcggcg gtcaaaggtg ataacttggt gggttataat
      961 aaggatacta tcattaaagc cacctccatg actcttatag ctggtggcat cgatactatg
     1021 agtgtgatgc ttacctggac gctctcgttg ctactaaaca accgaagcac cctcaaattg
     1081 gctatagaag aactagatat gcatgtggga aaaggtaaac aagtcaacga atcaagcata
     1141 aacaatcttg tatacctcaa agctataata aaagaagcat tgcgactcta cccagccggt
     1201 ttcttaggag gaccaagagc tttttcagaa aactgtgttg tagctggtta caatgtccca
     1261 aaaggcactt ggttactaat caatatgtgg aagctgcacc gtgatccaaa catatggtcc
     1321 gacccatgtg agtttaaacc agagaggttc ttaactccaa agcataagga cgtagatgtt
     1381 ataggagcgg attatgagct gatccctttt ggtgcaggaa gaaggtcttg tcctgggata
     1441 gctttgtcgc ttcaaatgtt acccatggtt atagccactg ttttacaaaa ctttgagtta
     1501 tcaacaccaa acgatgaaga tattgatatg actgcgagca ttggaatgac aaatgcaaag
     1561 gcgactcctc ttcaagttct aatagcccca cgctttccag aacgacaaat agatgtttaa
     1621 aaatgtgcgc ttaattgtta atttcgacga acataattat atgttatgtg tgactactaa
     1681 tgtgtttagc atacgtctta agtaccatgg agttcataac tactagtaag ttaatgcctc
     1741 tgtttttgat tatcttactg atctgggtaa ctaagagttg gaacttagga actagtattt
     1801 ggtcttcgac attgtatcat tatatgtaat aaaaataatt attatacata ttcgt
//
LOCUS       XM_071886578             528 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RPV1-like (LOC139904644), mRNA.
ACCESSION   XM_071886578
VERSION     XM_071886578.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..528
                     /gene="LOC139904644"
                     /note="disease resistance protein RPV1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139904644"
     CDS             4..528
                     /gene="LOC139904644"
                     /codon_start=1
                     /product="disease resistance protein RPV1-like"
                     /protein_id="XP_071742679.1"
                     /db_xref="GeneID:139904644"
                     /translation="MASSSSYSHSASSTFYHVFLSFRGGDVRKTFVDHLYSALTDRPI
                     NVYKDDKALPRGETIGPALFEAIEHSKIAVVVFSKNYADSSWCLDELSHIMRCRDENG
                     LIVMPIFYDVEPSDVRKRKRDFGEAFAKQEANNVNKADSWRKALFDASNIAGWEPKHF
                     ADGDWLTPYFLRMM"
     misc_feature    49..459
                     /gene="LOC139904644"
                     /note="TIR domain; Region: TIR; pfam01582"
                     /db_xref="CDD:396246"
ORIGIN      
        1 tcaatggctt cttcatcttc atattctcac tctgcttctt ctacctttta tcatgtattt
       61 ctaagttttc gaggaggcga tgtccgcaaa acttttgtag atcatctcta ctcggctctt
      121 acagatcgac caatcaacgt ttacaaggac gataaagcac ttccccgagg tgaaaccatc
      181 ggtccagcac tcttcgaggc tatcgaacat tctaagattg ctgtcgttgt attctccaaa
      241 aactacgcag attcatcgtg gtgtcttgat gaactttcac atattatgag gtgcagagat
      301 gagaatgggc tgattgttat gcccatattc tatgatgtgg aaccctcgga tgtgaggaaa
      361 cggaaaaggg atttcggaga agcttttgca aaacaagagg cgaataacgt caataaagct
      421 gattcgtgga gaaaagcact ttttgatgca agtaacattg ctggatggga acctaaacac
      481 tttgctgacg gggactggtt gactccctac tttttaagaa tgatgtaa
//
LOCUS       XM_071886579            1521 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alkane hydroxylase MAH1-like
            (LOC139904646), mRNA.
ACCESSION   XM_071886579
VERSION     XM_071886579.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1521
                     /gene="LOC139904646"
                     /note="alkane hydroxylase MAH1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139904646"
     CDS             1..1521
                     /gene="LOC139904646"
                     /codon_start=1
                     /product="alkane hydroxylase MAH1-like"
                     /protein_id="XP_071742680.1"
                     /db_xref="GeneID:139904646"
                     /translation="MAHHGGQMRRIQNHLRCLGPNILTKRSIIPTNWPVLGMIPGLFV
                     NTHRIHDHITEILTQTGGTFMFKGPWFSNMNMLMTTHPLDIQHVLYKNFNNYPKGDKY
                     RNIFDIFGNGLLTSDGALWEIQRKITLSLFKHANYQTLLETIVWNKLENGLLPILGSI
                     FKDGKEFDLQELFDKFTFDNTCKLLLDHDPESLSLDFPYIPCQKAANDIGDAIFQRHC
                     TPPSMWKLKQLLRLGAENKLRDAWRILDDFIYKYLVEKQVDCNEINCEKQGGNVLLLT
                     TFMKDIKHQCGEFGDPNMILRDMILSLIFAGKDTISSALSWFFYLLAKNPIVEDKIME
                     EIKTHLEVKVGQRWNAKDISEMVYLNGALNESLRLFPPIPLIYKTPLQPDVLPSGHNV
                     DQKTQILLSYYSMGRMKSIWGEDCMEFKPERWISNARRIKHEPSYKYTTFNAGPRSCL
                     GKDMSLFQTKIVAATVIYHYHIELMEGYCMVPADSVVLKMKHGLKVKLSKRNEVNY"
     misc_feature    190..1482
                     /gene="LOC139904646"
                     /note="cytochrome P450 family 86, subfamily A; Region:
                     CYP86A; cd11064"
                     /db_xref="CDD:410687"
     misc_feature    order(361..363,373..375,394..396,541..543,904..909,
                     916..921,928..933,940..942,1099..1101,1126..1128,
                     1132..1134,1204..1206,1321..1329,1339..1353,1360..1365)
                     /gene="LOC139904646"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410687"
     misc_feature    order(625..630,904..906,913..918,928..930,1120..1131)
                     /gene="LOC139904646"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410687"
ORIGIN      
        1 atggcgcatc atgggggtca gatgcggcgc atccagaatc acttgcgttg tttgggtcct
       61 aatatcctaa caaaacgatc cattatccca acgaattggc cagttcttgg tatgatacca
      121 ggactatttg taaacactca ccgaatccat gatcacataa ctgaaattct cacacaaaca
      181 gggggtacat ttatgtttaa aggcccttgg ttcagcaaca tgaacatgct catgactact
      241 catcctctag acatccaaca tgttctttac aaaaacttca acaactatcc caaaggtgat
      301 aaatatcgta acatctttga tatcttcgga aatggactac ttacttccga tggtgcgtta
      361 tgggagatcc aacgcaagat aaccctgtcc ttgtttaaac atgctaacta tcaaactttg
      421 ctagaaacca ttgtttggaa caagttggag aatgggcttc tacctatact tggatccatt
      481 tttaaagatg gaaaggagtt cgatttacaa gaattatttg ataaatttac tttcgacaat
      541 acatgcaaac ttctcttgga tcatgaccct gaaagcttgt ctcttgattt tccttacatt
      601 ccatgtcaaa aggcggcaaa tgatattggc gacgctatat ttcaaaggca ttgcacgcct
      661 ccaagtatgt ggaaactcaa acaacttctt agattgggcg ctgaaaacaa gttgcgagac
      721 gcatggagaa ttcttgacga tttcatatac aagtacttgg tcgaaaaaca agttgattgc
      781 aacgaaatca attgtgaaaa acaaggggga aatgtcttat tgctaaccac tttcatgaaa
      841 gatatcaaac atcaatgtgg tgagtttggg gatccaaaca tgatcttaag agatatgata
      901 ttaagtctaa ttttcgcagg aaaagatacc attagtagcg ctctgtcttg gttcttttat
      961 ctccttgcga aaaatccaat agtcgaagat aagattatgg aagagattaa aacacacctt
     1021 gaggtgaaag taggtcaaag atggaatgca aaagacatca gtgaaatggt ataccttaac
     1081 ggagcgttaa atgaatcgtt aaggcttttc cctcctattc cgcttatcta caaaactccg
     1141 ttacaaccgg acgttctacc aagtggtcac aatgttgatc aaaagacaca aattctttta
     1201 agttattatt caatgggaag gatgaaatcg atatggggtg aagattgtat ggagtttaag
     1261 cctgagaggt ggatttcgaa tgcaagaaga attaaacatg agccgtcata taaatatacg
     1321 acgtttaatg ctggcccaag aagctgttta ggtaaggata tgtctttatt tcaaacaaag
     1381 atagtggcag ctacagttat ttatcattat cacattgagt tgatggaggg ttattgtatg
     1441 gttccggccg attctgttgt actaaagatg aagcatggtc ttaaggtcaa attaagcaaa
     1501 agaaatgaag taaattactg a
//
LOCUS       XM_071886580             789 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ GFA2,
            mitochondrial-like (LOC139904647), mRNA.
ACCESSION   XM_071886580
VERSION     XM_071886580.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..789
                     /gene="LOC139904647"
                     /note="chaperone protein dnaJ GFA2, mitochondrial-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139904647"
     CDS             1..789
                     /gene="LOC139904647"
                     /codon_start=1
                     /product="chaperone protein dnaJ GFA2, mitochondrial-like"
                     /protein_id="XP_071742681.1"
                     /db_xref="GeneID:139904647"
                     /translation="MAAKDYYDTLKVNKNVTASEIKNAYYMLAKKWHPDVNKNDPEAA
                     ETMFKKISKAYEVLKDEEKRAQYDQDQALKDEEKRAQYDHSYHQKCGFGGPVDCDFGG
                     NDVKVTLELSFMEAVLGCTRNVVFETESTCKVCGGTGIFGFKRSCKTCNAKKVVRGPK
                     SVKVDIMPGVDTNEELSISGSGGADPDGNQPGDLYVVIKVQDHPVFRRQGPDIHVDAF
                     LNKTQARLGETIQVPTLTGDVLLKVLPGTHRGEQVVMKGKGRLH"
     misc_feature    13..777
                     /gene="LOC139904647"
                     /note="chaperone protein DnaJ; Region: DnaJ_bact;
                     TIGR02349"
                     /db_xref="CDD:274090"
ORIGIN      
        1 atggctgcta aagattatta tgatacactc aaagtcaata agaatgtgac tgcatcagaa
       61 attaagaacg cctattacat gttagcaaag aagtggcatc cagatgtaaa taaaaatgat
      121 ccagaagcag ctgaaacaat gtttaagaaa atttcaaagg catacgaggt tctgaaagat
      181 gaggagaaac gagcacaata tgaccaggac caggctctga aagatgagga gaaacgagca
      241 caatatgacc attcttatca tcagaaatgt ggttttggtg ggccagttga ttgcgatttt
      301 ggtggcaatg atgttaaggt aacccttgaa ctttccttta tggaagctgt gctgggatgt
      361 accagaaacg tagtcttcga gaccgagtcg acttgtaaag tttgtggtgg aactggtata
      421 tttggcttta agcggtcatg caagacatgc aatgccaaga aggttgtgag aggaccaaag
      481 tcggtgaaag tagatataat gccaggagtt gatacaaatg aagaattaag tatttctgga
      541 agtggtgggg cagatccaga tggtaaccag cctggtgatc tttatgttgt catcaaggtg
      601 caagatcacc ctgtttttcg acgacaagga ccagatattc atgttgatgc ttttctgaat
      661 aagactcagg caaggttggg agaaactata caagtcccaa cattgacggg tgacgttctt
      721 cttaaggttc ttccgggaac ccatcgtggt gaacaagtag taatgaaggg aaaaggtaga
      781 ttgcattga
//
LOCUS       XM_071886581            3037 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904648), mRNA.
ACCESSION   XM_071886581
VERSION     XM_071886581.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3037
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3037
                     /gene="LOC139904648"
                     /note="uncharacterized LOC139904648; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904648"
     CDS             1..2886
                     /gene="LOC139904648"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742682.1"
                     /db_xref="GeneID:139904648"
                     /translation="MISSIPTIVLSPFTPATSRYMHLSSSRRHIHNPHNTFANRIQTS
                     PCSPANFGTNQWPGYGVEYKQKAPIPSPFPAEDTDDGWRVVQRKHNGKNISNPKIDQA
                     KILIQKYGNPGLRKNQFRQQWIPRSEPKNDNGGYHSNHKIPATSPNNIPLSNANISVN
                     TAAKARDNPRNQSVSSTNTTSNYNNQQNPTHLIRSKSGLNHQSTRLNSSYNQLYNNFK
                     IRESATNLINRYGKPFPDANNSKTNQLPKPIDKSRITSYLFHNFPEHWCSTDLWDVFK
                     KYGNIHEVYIPRKTLKNGRKFGFVRFLDVPDYHKDSLARRLSLIVAGDNLLKVYKARD
                     PEGKKQAPQPNNAKSGSRNNVKVAFNSPVDERNFKEVVLNKQATNYGIPSIKVNSNDD
                     LIQILGQAVIAKVKDLEFLEYFNEICESENLGGFTIKYLGGHDLMLIFEEPNPALDLI
                     NNSEHPLWKWLEDINPWDPEIYKTSGRLVYVNIFGVPITCWLESTFIDIAKNWGEVIE
                     TFNCSITNENNQDLSHGSVIIKTNNFSPINGQVIINPGDVNQSKAYIIEVQNFSMFNT
                     YGDIDNSSNWDDEILSDDHISDEESHLDCENRVEGNAEKTTRNNNHDPTPPHQTSSNS
                     SKRMDTRPLINNADNQSLQSPSISKPINHFDTTNPHTHNPSNPETVLNNTSSTKETSP
                     SNETDPIEPPPIPDFNTARPYNTTSYQPKPKTIPLESTVITQPITTNTPPSPPREDTL
                     AIPQPNTVINGPSNHVNDTPVTPSHISGKSNMDSSPQHILTNDLCSPIVTQEHADSVP
                     ETLPHHTTNDTPCTTPLNPQSNSPLNFMPAPNATQQTNSDPFNLEPLLYTGKEISKKR
                     KISSTIAKPIIKSKNTSQNPDFKRPRSNMLYIKHLARSGQKLRISQLAKRCKSSSNGG
                     GSTSYFSKGSHMDMVHNKKTKKTGSTSSKSLDTFEFGKSIGIRRNNP"
     misc_feature    781..>930
                     /gene="LOC139904648"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cd00590"
                     /db_xref="CDD:409669"
     misc_feature    <1270..1584
                     /gene="LOC139904648"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
     misc_feature    <1990..>2631
                     /gene="LOC139904648"
                     /note="CCR4-NOT transcriptional regulation complex, NOT5
                     subunit [Transcription]; Region: Not5; COG5665"
                     /db_xref="CDD:444384"
ORIGIN      
        1 atgatctcct caatccctac catcgtactg tctcctttca cgccggcaac tagccggtac
       61 atgcatcttt catcttcccg acggcacatc cacaatcccc acaacacttt cgccaatcgt
      121 atacagacat caccatgttc tccggctaat tttggtacta atcagtggcc aggttatggg
      181 gttgaataca agcaaaaggc tccaattccc tcgccctttc cagctgaaga tacagatgac
      241 ggttggagag tggtccaacg aaaacataac ggtaagaata tatctaaccc taaaatcgat
      301 caggcaaaaa tcttaatcca aaaatatgga aatccgggcc ttcgcaagaa ccaattccgg
      361 caacagtgga tccctagatc cgaacctaaa aacgacaatg gtggttatca ctctaaccat
      421 aaaatcccag ccacttctcc caacaacatt cccctttcca atgccaatat ttctgtcaat
      481 actgctgcta aggctaggga caacccccga aaccaatctg tttcatcgac taacaccacg
      541 tctaattaca ataaccagca gaatccaacc caccttatcc gatccaaatc tggtctcaat
      601 catcaatcga caaggttaaa ctcatcctac aatcaattat acaacaactt caaaatacgg
      661 gaatcagcca ccaaccttat caatcgttat ggcaagcctt ttccagatgc gaataattct
      721 aaaacaaatc aattgccaaa accgatcgac aagtctagaa ttacttcata cctcttccac
      781 aactttcccg aacactggtg ttcaacggac ttatgggatg ttttcaaaaa atatggcaat
      841 atccacgagg tttacatccc caggaagacc ttaaaaaacg gaaggaagtt tggttttgtt
      901 agattcttag acgttccaga ttaccacaaa gattctcttg cgaggagact aagtctcatt
      961 gttgcgggtg acaatttact caaagtttac aaggcccgtg atcccgaagg aaagaaacaa
     1021 gctccacagc ctaacaatgc aaaatcgggt tctaggaaca atgttaaggt tgcatttaac
     1081 tcacctgtag acgaaaggaa tttcaaagaa gtggtcctaa acaagcaggc tacaaactac
     1141 ggcatcccct cgattaaggt aaattctaat gatgatctta tccaaatact tggtcaagcg
     1201 gttattgcca aagttaaaga tcttgaattc cttgaatatt ttaatgaaat atgtgaaagt
     1261 gaaaaccttg gtgggtttac tatcaaatac ctgggcgggc atgatctaat gcttatattt
     1321 gaggaaccca acccggccct agacttgatt aacaattcgg aacacccatt atggaaatgg
     1381 cttgaagata taaacccatg ggatcccgaa atttacaaaa cctctggtag acttgtctat
     1441 gttaacatat tcggggtacc tattacttgt tggttagaat ccacattcat tgacatagca
     1501 aaaaattggg gcgaggtaat tgaaacgttt aattgctcta taaccaatga gaacaaccaa
     1561 gatttatcgc atggctcggt aattatcaaa acaaacaatt tctcaccgat aaacggccaa
     1621 gttattatca accccggtga cgtcaatcaa tctaaggctt acatcattga agttcaaaac
     1681 ttttctatgt ttaacactta tggtgatatc gataattcgt cgaattggga tgatgaaatt
     1741 ctttcggacg atcacatttc tgacgaagag tcccacttgg attgtgaaaa tcgagttgaa
     1801 ggaaacgctg aaaagaccac ccgtaacaac aaccacgatc ccacgcctcc tcaccaaacc
     1861 tcctctaatt cctctaaacg aatggatact cgtcccttaa ttaataatgc cgataaccaa
     1921 tctctccaat ctcctagcat atcgaaaccc atcaaccact ttgacaccac aaaccctcac
     1981 acccataatc cttccaatcc cgaaactgtt ttaaataata ctagctctac aaaagaaact
     2041 agcccatcga atgaaactga tccaattgaa ccacctccta ttcctgattt taatacagca
     2101 aggccatata ataccacctc atatcaacca aaaccaaaaa ccatcccttt ggagtccact
     2161 gtaatcacgc agcccattac caccaatacc cccccaagcc caccaagaga ggataccctt
     2221 gcaatcccgc agcccaacac tgttattaac ggcccatcga atcatgtaaa tgatacccct
     2281 gttacaccta gccacatctc gggtaaatct aatatggaca gctcacctca acacattcta
     2341 acaaatgatt tatgctcacc aatagtgaca caagaacatg cagattctgt tcccgaaacc
     2401 ctccctcacc ataccacaaa cgacaccccc tgtactaccc ctttaaaccc tcaatccaac
     2461 tctccattaa attttatgcc tgcccctaac gctacacaac aaacaaattc cgatcctttc
     2521 aacctcgaac ctttacttta tacgggtaaa gaaatttcta aaaagagaaa aatttctagc
     2581 accatcgcca aacctatcat taagtcaaaa aacacctctc aaaacccaga ttttaaaaga
     2641 cctagatcca atatgcttta catcaaacat ctagctagaa gtggccaaaa gcttagaatc
     2701 tctcaactgg ctaaacgttg taagtcctcg tctaacggtg gtggtagcac atcctacttc
     2761 tcgaagggat ctcatatgga catggtacat aacaaaaaga ctaaaaagac aggttctacc
     2821 tctagcaaaa gcttggatac gttcgaattc gggaaaagca tcgggattcg tcgcaacaac
     2881 ccatgaatcc acctccgtca catcgattct gaacatttca ggtcgcacca tttggaaaga
     2941 gattattaaa gctggaaaag ttgctgacaa tataggcaca accttcacat cctcgatttc
     3001 aaagcgcata ggaaatggca catcaataag cttctgg
//
LOCUS       XM_071886582            3176 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904649), mRNA.
ACCESSION   XM_071886582
VERSION     XM_071886582.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3176
                     /gene="LOC139904649"
                     /note="uncharacterized LOC139904649; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139904649"
     CDS             373..2880
                     /gene="LOC139904649"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742683.1"
                     /db_xref="GeneID:139904649"
                     /translation="MDFKIRCRRNGNSRYWTELLLLQILVILVFFDIIQAKFDDNQLH
                     LRGPEKGIENIASHSCIHDEIIEQRRKRSGNKFYSVTPQVYHEATEPEPLHRKGRALL
                     EIPKVSGFSKDAKEPIRIYLNYDAVGHSPARDCRNVGEIVKLGEPPATNNFGTPSCDP
                     HKDPPISGDCWYNCTSDDIAGEDKRHRLRRALGQTADWFRRALSVEPVRGNLRLSGYS
                     ACGQDGGVQLPRKYVEEGVADADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVN
                     VAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFTHFRDERKRRRGQVTEQVMDEKLGR
                     VVTRVVLPRVVMHSRYHYGTFSENFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVD
                     TRSVVSKMTLALLEDSGWYRANYSMADGLDWGRNQGTEFVTAPCNLWKGAYHCNTTQL
                     TGCTYNREAEGYCPILTYSDDLPLWARYFPQPNKGGQSSLADFCTYLVAYSDGSCIDT
                     NSAREPDRMLGEVRGSNSRCMASSLVRNGFVRGSMTQGNGCYQRRCINNTLEVAVDGI
                     WKACPEAGGPVQFPGFNGELICPAYHELCSVEPIMASGQCPNSCNSNGDCVDGKCHCF
                     IGFDGLDCSHRSCPSKCSGNGRCLKNGVCECENGYTGIDCSTAVCDEQCSLHGGVCDN
                     GVCEFRCSDYAGYTCRNTSTLLDSLSVCKDVLLNDADGQHCAPSESSILQQLEEVVVM
                     PNYLRLYPTGARKFFNIFRGRNCDKAAKRLACWISIQKCEKDGDNRLRVCHSACQAYN
                     LACGASLDCSDQTLFSEEGEGEGEGLCTGWGEMDSWL"
     misc_feature    544..2157
                     /gene="LOC139904649"
                     /note="Leishmanolysin; Region: Peptidase_M8; cl19482"
                     /db_xref="CDD:388572"
ORIGIN      
        1 ttctcatcct ccttaaaaat tcacacacat atttcattga aaccccaaca cagtttgctt
       61 acaagaacac aactttgaac attaaacact tagattccta ttgaaaaatc acatcttttt
      121 acaagccggc aaagaaacat cgaagaagaa tcagtcttct gtttgcagct ggttgaaatt
      181 aacgttattt aaatttgtgt acatctaatt tctaatttgt tgtatatacc ataaattcag
      241 ctcaacttta aaagaaccag ttggtttttt tataataata atgcaagaca tatttgtggg
      301 tttgatgatg atgtattttc cgatctgggt atcgcttatt tgatgtcgcc cgaaaagatt
      361 tgatacattt taatggattt caagattcgt tgcagaagaa atggtaatag tagatattgg
      421 actgaactat tacttctaca gattcttgta atattagtat ttttcgacat cattcaagca
      481 aagtttgatg ataatcaatt gcatttgaga gggccagaaa aaggcattga aaatattgca
      541 tcacattctt gtattcatga tgagataatc gaacaaagaa ggaagagatc cgggaacaag
      601 ttctattcag taaccccaca agtttatcac gaggctactg aacccgagcc tcttcaccgc
      661 aagggaaggg cattattgga aattccaaaa gtttcggggt tctcaaaaga tgcaaaagaa
      721 cccatcagaa tatatttgaa ttatgatgct gttggtcatt cacctgctag agactgtagg
      781 aacgttggcg aaattgtcaa attaggtgaa ccacctgcaa ctaataattt tggtacaccc
      841 tcttgtgatc ctcacaaaga tccaccaatt tctggggatt gttggtataa ttgcacctca
      901 gatgatatag ctggcgagga taaaaggcat cgtctgcgaa gggcactagg gcagacagca
      961 gactggttta gaagagcttt gtctgttgag cctgtaagag gaaacttacg attaagtggt
     1021 tactctgctt gtggacaaga tggtggtgtt cagcttcctc gtaaatatgt agaagaggga
     1081 gttgcggatg ccgatttagt tcttttggtg actacaaggc ctacaacagg gaatacttta
     1141 gcatgggcag tagcatgtga acgtgatcaa tgggggcgtg caattgctgg gcatgtgaat
     1201 gttgcccctc gtcacttgac tgctgaagca gaaacgttac tttcggctac ccttatacat
     1261 gaagtgatgc atgttcttgg atttgaccct catgccttca cacatttcag agatgagaga
     1321 aaaaggcggc gtggtcaggt tacggaacag gtaatggatg aaaagcttgg gagggtggtg
     1381 acacgtgttg tgttgccacg cgttgtcatg cattcacgct atcattatgg gacattctcc
     1441 gagaatttta ctgggttgga attggaagac ggtggaggcc gtggaacatc aggatctcat
     1501 tgggagaaga ggcttttaat gaacgaaatt atgacgggtt cagttgatac gcgatcggta
     1561 gtttcaaaaa tgaccctagc tttactcgag gatagtggtt ggtatcgggc taattatagc
     1621 atggccgatg ggctcgattg gggtcgtaat caaggcaccg aatttgtaac tgctccttgt
     1681 aacctttgga aaggtgcata tcattgtaac actacacaat taacgggatg tacatataat
     1741 cgagaggccg agggttattg cccaatacta acttatagtg atgacttacc cctgtgggcc
     1801 cgttacttcc ctcaacctaa taaaggtggg cagtcgtcat tggctgattt ttgtacgtat
     1861 cttgtagcgt attctgatgg ttcatgtata gatactaata gtgcgcgaga acctgataga
     1921 atgttgggtg aagtacgtgg aagtaactcg aggtgtatgg cttcttcatt agtaagaaac
     1981 ggctttgttc ggggttctat gacccaagga aatggttgtt atcaacgtag atgtataaac
     2041 aatacattgg aggtggctgt tgacggtatc tggaaggcat gtcccgaagc tggtggacca
     2101 gtccagtttc cagggtttaa cggtgaactg atctgcccgg cgtatcatga actttgtagt
     2161 gtagaaccta ttatggcatc cgggcagtgc ccgaactcgt gtaactccaa cggtgattgt
     2221 gttgatggaa aatgtcactg ttttattggc tttgatggtc tcgattgtag ccatcgatcc
     2281 tgccctagca aatgtagcgg aaacgggagg tgcctcaaaa acggtgtttg cgaatgtgaa
     2341 aacggataca ctgggattga ttgctcaacc gctgtgtgtg atgaacaatg cagtctccat
     2401 ggtggggtat gcgataacgg tgtgtgtgaa ttccggtgct ccgattacgc ggggtacacc
     2461 tgtagaaata catcaactct tcttgacagt ctttcagttt gtaaagatgt attattaaac
     2521 gatgctgacg ggcaacattg tgcaccgagt gaatcaagca tattgcagca gctcgaggaa
     2581 gttgtggtaa tgccaaatta ccttcgcttg tacccgactg gtgctagaaa attttttaac
     2641 atctttagag gcagaaattg cgataaagct gctaaacgac tagcatgttg gatatcgata
     2701 cagaaatgtg aaaaagacgg cgacaacaga ttacgagtgt gccattctgc atgtcaagcg
     2761 tataatttgg cgtgtggggc atcattggat tgttcggatc aaacgctttt tagcgaagaa
     2821 ggtgaggggg aaggcgaggg gttgtgcacg ggctggggtg aaatggattc ttggttatga
     2881 accgatccgt tgtattaaca gttaattcgt gtaaatcata ggcagttttt gttgttaccc
     2941 gagttcggga tgtagtttgt atgaggttag tgtataatgt taggcaaagg tcatagcaca
     3001 aagtgctaat ggctgtagag attagggttt gttgtttttc ctaacccaag agttatttta
     3061 attttttggg gtaggattct tcgaattgat gaaaatgaag tctttttaca atgtagatga
     3121 atgaatgtat ggattataaa aagaagtgtt aaaaagagac tgtaaagatt cactta
//
LOCUS       XM_071886583            1616 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904650), mRNA.
ACCESSION   XM_071886583
VERSION     XM_071886583.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1616
                     /gene="LOC139904650"
                     /note="uncharacterized LOC139904650; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904650"
     CDS             1..1593
                     /gene="LOC139904650"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742684.1"
                     /db_xref="GeneID:139904650"
                     /translation="MASSSSMHTPGGYVSYMTEAKLQTLQEWYPPLSQFVPTVPAAEQ
                     RADTPPKGMISVYEVAISQGNLRFPLTRFFRSVCEYYNIAIAQLHPNAINKIMLFEMY
                     CNAISQPPLLNVFRMCNSLVLYDVGWFSFRSKLGVMTSPKDSIGNWRSSFFYTNDTAY
                     VNNKIPKTWCTELNPDVNERPVLDDLENDTLKILKNAAVALDLVMRSADISRISPARR
                     LKNGDGNIILIDEPIINTCFIIGGEDRGKRKVADTTPTPRKKRLRTHSEQEARSSAEA
                     TPLYNIRGRIPTDVLNEPGNEDLSLPSDAEASNEEEERETTTEETAAADRAFKLYQKL
                     YKFVPAETREQYRKLSYPAAARQRLHNCYNAIYLTVDSMERFTEMSDEYEKATKAANA
                     QERRARKAESRLEKVMEENARLKRRAEVAEHEFAQLVKYLPTFADKVMDSEPVTEKFQ
                     TYAQASKLATRCEWHDLLCQLGDLSQPLPSDMAKEIIATDDAREILERAKKEVEKINI
                     PVLEELSQREGVTFADIKALEF"
     misc_feature    196..348
                     /gene="LOC139904650"
                     /note="Putative gypsy type transposon; Region:
                     Transposase_28; pfam04195"
                     /db_xref="CDD:461222"
     misc_feature    1117..>1284
                     /gene="LOC139904650"
                     /note="Ezrin/radixin/moesin, alpha-helical domain; Region:
                     ERM_helical; pfam20492"
                     /db_xref="CDD:466641"
ORIGIN      
        1 atggcatcgt cttcttcaat gcacactccc ggaggatatg tttcctacat gacggaagca
       61 aaactgcaaa ctttgcaaga atggtaccca ccactttccc aattcgttcc taccgtgcct
      121 gcggcagagc agcgagccga tactccccct aaagggatga tatccgtgta cgaggttgcc
      181 atttctcaag gcaaccttcg atttcccctt acccgttttt ttcgcagcgt ttgcgaatat
      241 tataacatcg ctatagcgca gttgcatcct aacgcaatta acaagattat gctatttgag
      301 atgtattgca acgccatcag ccaaccaccg ctgctaaacg tttttcggat gtgcaatagc
      361 ctggtgctat atgacgttgg gtggttttct ttccgcagta aacttggcgt aatgacttca
      421 ccaaaagatt caattgggaa ttggcgcagt tccttcttct atactaacga tacagcatat
      481 gtgaataaca aaataccgaa aacgtggtgt acagagctta atcccgacgt caatgagagg
      541 cctgtactcg atgatcttga gaatgacact ctcaagatac ttaaaaacgc ggcggttgca
      601 cttgaccttg tcatgaggtc cgctgatata agcaggatta gccctgcccg tcgcctaaaa
      661 aatggcgacg gcaacattat tcttattgat gaaccgatca tcaatacatg ctttattatt
      721 ggaggtgagg atcgcggtaa gcgcaaggtt gcggatacga ctcccactcc acgcaagaaa
      781 cgcctgcgca ctcactctga acaagaagca aggtcatccg ctgaagctac accgctttat
      841 aacatcagag ggagaatccc tacagatgtt cttaatgaac ccgggaatga agatttatct
      901 cttccatctg acgcagaagc gtccaacgag gaagaagaaa gagaaaccac tacggaagaa
      961 actgccgcag cagatcgggc gtttaagctg taccaaaagc tttataaatt tgttcctgca
     1021 gaaacaaggg agcaataccg caaactgtct tatcccgcag cggccaggca acgactgcat
     1081 aattgctata atgcaattta tctaacagtc gatagcatgg agcgttttac tgagatgtca
     1141 gacgagtatg agaaagcaac taaggctgcc aacgcccaag agagaagggc gcgaaaggct
     1201 gaatcgcggc ttgaaaaggt gatggaagag aacgcccgac ttaaaagaag ggcagaggtc
     1261 gcggaacacg agttcgcaca gctagtcaaa tatctaccga catttgcgga taaagtgatg
     1321 gactccgagc cagtcactga aaaatttcaa acatatgccc aagcatcaaa gctcgccact
     1381 cgctgcgagt ggcacgattt attatgccaa cttggcgatc tttcgcaacc tcttccctct
     1441 gacatggcga aagaaattat cgccaccgat gatgctcgcg aaatacttga gagggcaaag
     1501 aaagaggttg agaaaatcaa catacctgtt cttgaggaac tcagtcagcg ggaaggcgtt
     1561 acatttgcag atatcaaagc attagaattt tagctttgcc ttaactaatt tgctta
//
LOCUS       XM_071886584            2375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904651), transcript variant X1, mRNA.
ACCESSION   XM_071886584
VERSION     XM_071886584.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2375
                     /gene="LOC139904651"
                     /note="uncharacterized LOC139904651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904651"
     CDS             357..1889
                     /gene="LOC139904651"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071742685.1"
                     /db_xref="GeneID:139904651"
                     /translation="MKDQAQMMNNNNQSNMMMSMGQALPPVMSQPQQQVMNNGPNNIN
                     NNNNNVPNPFMNQLMVNQSQSQAMLNHRIGGGGYGMWPPPQVEQLKFQNPNLKPPGIP
                     LKPMGPRIGNNKNWKGKKGNDKWINNKVMAGGGGGGGGASSNTGGGGSGGGAYNPPTL
                     NELQQQNRLKARRYFPKKKFNHGGRSAPFAPRNTTSFLIRAKKAGGITSLVSPCPVTP
                     AVLPTPIFSPSREVLVDMAKEEWGVDGYGSMKGLIRLRSGNEADAVEDEEEDEGGSSE
                     SDVEEHVEVERRLDHDLSRFEMIYPNYNGADYSSYNLENRVDDQDTHIAQLEEENLIL
                     KERLFLMEREFDDLRMRLQCLERQSRGVERLNEEVVENDSENESESSRGYGRSMEENN
                     DEINERSQNSEGNNNGATYATEVKQSDSVEVADINKNLGVSTDVCMEEPADGPADVEL
                     KKVNNNGPADVELKKENSDGPAGGNVEKCNVDVGLNTEVGDVSKEELESAKDVNEAQQ
                     ME"
ORIGIN      
        1 acataacaag acctaaaacg ttacagaaca aatttcttga tattcatcag atcaaattaa
       61 atcaactatt taaatttgta taatttatta ttttaatttt atttctctta atcgcacaaa
      121 aatcgtgaat atcaagaatt aatcttgttg tctgataggt ttagggtttg ttaattttaa
      181 tccccaattt cctcaattcg tataatcggc cttaactata tattcatatc cttgttttat
      241 aattgaacat tttcaggatc ttaaaatcaa aaatcgaaac tctagggttt cgaattttta
      301 tctaattgct cttgattttg ctaaaataat tgaatttgat ccttgaattg aattagatga
      361 aagatcaggc gcagatgatg aacaacaaca atcaatcgaa tatgatgatg agtatggggc
      421 aagcgttacc gcctgttatg agtcagccac agcagcaggt aatgaacaat gggcctaaca
      481 atattaataa taacaataat aatgttccga atccgtttat gaatcagttg atggtgaatc
      541 aatcgcagtc acaggcgatg ttgaatcatc gaattggtgg cggtggttat ggaatgtggc
      601 caccaccaca agtggaacaa ttgaagtttc aaaaccctaa tttgaagcct ccaggcatcc
      661 ccttgaaacc tatgggacca cggattggta ataataagaa ttggaagggc aaaaagggaa
      721 atgataagtg gattaataac aaggttatgg ctggtggtgg tggtggtggt ggtggtgcta
      781 gtagtaacac cggtggtggt ggtagcggtg gcggtgctta taatccgcct acattaaatg
      841 aactgcaaca gcaaaatcgg ttgaaagcga ggaggtactt cccgaagaag aagtttaatc
      901 acggtgggcg atctgcgcct tttgcgccga gaaacactac ctcgtttcta attcgtgcga
      961 agaaagcggg tgggattacg tcgttggtgt caccgtgtcc ggtgacgcct gcggtgcttc
     1021 cgacgccgat attttcgcca tctagagagg ttttggttga tatggcgaaa gaagagtggg
     1081 gtgttgatgg gtatgggtcg atgaaagggt tgatcaggtt aaggtctgga aatgaagctg
     1141 atgcggttga ggatgaggaa gaagatgaag gtgggtcgag tgagagtgat gttgaggaac
     1201 atgtggaagt tgagaggaga ttggatcatg atttgagtcg gtttgagatg atttatccga
     1261 attataacgg ggcggattat agtagttata atttggagaa cagggttgat gatcaggata
     1321 cacatatagc tcaattggaa gaagagaatt tgatattgaa agaacggttg tttttgatgg
     1381 aaagggaatt tgatgatttg agaatgcggt tgcagtgttt agagagacag agtaggggtg
     1441 tggaacgact taatgaagag gttgtggaga atgattctga aaatgagagt gaaagcagca
     1501 ggggttatgg tcgctcgatg gaggagaaca atgatgaaat taacgaaaga agtcaaaact
     1561 ctgaaggtaa taacaatggg gcaacatatg ctactgaagt taagcaatct gatagtgttg
     1621 aagttgctga tattaataaa aatttaggtg tttcaacaga tgtttgtatg gaagagcctg
     1681 cggacgggcc agcagatgtt gaattaaaga aagtaaacaa taacgggcca gcagacgttg
     1741 agttaaagaa agaaaacagt gatgggccag caggtgggaa tgttgaaaaa tgcaatgttg
     1801 atgtcgggtt aaatactgaa gtaggagatg ttagtaaaga agagcttgaa tctgcaaagg
     1861 atgtgaatga agctcagcaa atggagtgaa ttttggtttt aggaaccatt ctccacaatc
     1921 tcttcatcaa gtctttctac ttttggactc tgcctctgca caccttgatt gaaccatttt
     1981 gtcaaaagca acgttcctct atttgcctat taagtcatgt tgtaatctag ctttgagcat
     2041 cttgatcatc aactcaaatc acgaaatggt aactactgat cagcaacggt attatgctaa
     2101 attggaagga aaatgaaaga ttgaatgatg ggtatgttac gcatgcaagt gcattatcaa
     2161 gatccgattg gtatacaata ttaccgaaat ttgaatctgc acagatggta tttgagcagc
     2221 aatgtcttgc aagttattaa acattaacat actattttac taccaggtat tatggaacta
     2281 ttgaaatttg tgtgatactg gtggttttaa aaaagtgagc tttagtattc cgtaactatt
     2341 gaattgaatg tacatcaata acaaagtgtg gtggt
//
LOCUS       XM_071886585            2306 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904651), transcript variant X2, mRNA.
ACCESSION   XM_071886585
VERSION     XM_071886585.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2306
                     /gene="LOC139904651"
                     /note="uncharacterized LOC139904651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904651"
     CDS             357..1820
                     /gene="LOC139904651"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071742686.1"
                     /db_xref="GeneID:139904651"
                     /translation="MKDQAQMMNNNNQSNMMMSMGQALPPVMSQPQQQLMVNQSQSQA
                     MLNHRIGGGGYGMWPPPQVEQLKFQNPNLKPPGIPLKPMGPRIGNNKNWKGKKGNDKW
                     INNKVMAGGGGGGGGASSNTGGGGSGGGAYNPPTLNELQQQNRLKARRYFPKKKFNHG
                     GRSAPFAPRNTTSFLIRAKKAGGITSLVSPCPVTPAVLPTPIFSPSREVLVDMAKEEW
                     GVDGYGSMKGLIRLRSGNEADAVEDEEEDEGGSSESDVEEHVEVERRLDHDLSRFEMI
                     YPNYNGADYSSYNLENRVDDQDTHIAQLEEENLILKERLFLMEREFDDLRMRLQCLER
                     QSRGVERLNEEVVENDSENESESSRGYGRSMEENNDEINERSQNSEGNNNGATYATEV
                     KQSDSVEVADINKNLGVSTDVCMEEPADGPADVELKKVNNNGPADVELKKENSDGPAG
                     GNVEKCNVDVGLNTEVGDVSKEELESAKDVNEAQQME"
ORIGIN      
        1 acataacaag acctaaaacg ttacagaaca aatttcttga tattcatcag atcaaattaa
       61 atcaactatt taaatttgta taatttatta ttttaatttt atttctctta atcgcacaaa
      121 aatcgtgaat atcaagaatt aatcttgttg tctgataggt ttagggtttg ttaattttaa
      181 tccccaattt cctcaattcg tataatcggc cttaactata tattcatatc cttgttttat
      241 aattgaacat tttcaggatc ttaaaatcaa aaatcgaaac tctagggttt cgaattttta
      301 tctaattgct cttgattttg ctaaaataat tgaatttgat ccttgaattg aattagatga
      361 aagatcaggc gcagatgatg aacaacaaca atcaatcgaa tatgatgatg agtatggggc
      421 aagcgttacc gcctgttatg agtcagccac agcagcagtt gatggtgaat caatcgcagt
      481 cacaggcgat gttgaatcat cgaattggtg gcggtggtta tggaatgtgg ccaccaccac
      541 aagtggaaca attgaagttt caaaacccta atttgaagcc tccaggcatc cccttgaaac
      601 ctatgggacc acggattggt aataataaga attggaaggg caaaaaggga aatgataagt
      661 ggattaataa caaggttatg gctggtggtg gtggtggtgg tggtggtgct agtagtaaca
      721 ccggtggtgg tggtagcggt ggcggtgctt ataatccgcc tacattaaat gaactgcaac
      781 agcaaaatcg gttgaaagcg aggaggtact tcccgaagaa gaagtttaat cacggtgggc
      841 gatctgcgcc ttttgcgccg agaaacacta cctcgtttct aattcgtgcg aagaaagcgg
      901 gtgggattac gtcgttggtg tcaccgtgtc cggtgacgcc tgcggtgctt ccgacgccga
      961 tattttcgcc atctagagag gttttggttg atatggcgaa agaagagtgg ggtgttgatg
     1021 ggtatgggtc gatgaaaggg ttgatcaggt taaggtctgg aaatgaagct gatgcggttg
     1081 aggatgagga agaagatgaa ggtgggtcga gtgagagtga tgttgaggaa catgtggaag
     1141 ttgagaggag attggatcat gatttgagtc ggtttgagat gatttatccg aattataacg
     1201 gggcggatta tagtagttat aatttggaga acagggttga tgatcaggat acacatatag
     1261 ctcaattgga agaagagaat ttgatattga aagaacggtt gtttttgatg gaaagggaat
     1321 ttgatgattt gagaatgcgg ttgcagtgtt tagagagaca gagtaggggt gtggaacgac
     1381 ttaatgaaga ggttgtggag aatgattctg aaaatgagag tgaaagcagc aggggttatg
     1441 gtcgctcgat ggaggagaac aatgatgaaa ttaacgaaag aagtcaaaac tctgaaggta
     1501 ataacaatgg ggcaacatat gctactgaag ttaagcaatc tgatagtgtt gaagttgctg
     1561 atattaataa aaatttaggt gtttcaacag atgtttgtat ggaagagcct gcggacgggc
     1621 cagcagatgt tgaattaaag aaagtaaaca ataacgggcc agcagacgtt gagttaaaga
     1681 aagaaaacag tgatgggcca gcaggtggga atgttgaaaa atgcaatgtt gatgtcgggt
     1741 taaatactga agtaggagat gttagtaaag aagagcttga atctgcaaag gatgtgaatg
     1801 aagctcagca aatggagtga attttggttt taggaaccat tctccacaat ctcttcatca
     1861 agtctttcta cttttggact ctgcctctgc acaccttgat tgaaccattt tgtcaaaagc
     1921 aacgttcctc tatttgccta ttaagtcatg ttgtaatcta gctttgagca tcttgatcat
     1981 caactcaaat cacgaaatgg taactactga tcagcaacgg tattatgcta aattggaagg
     2041 aaaatgaaag attgaatgat gggtatgtta cgcatgcaag tgcattatca agatccgatt
     2101 ggtatacaat attaccgaaa tttgaatctg cacagatggt atttgagcag caatgtcttg
     2161 caagttatta aacattaaca tactatttta ctaccaggta ttatggaact attgaaattt
     2221 gtgtgatact ggtggtttta aaaaagtgag ctttagtatt ccgtaactat tgaattgaat
     2281 gtacatcaat aacaaagtgt ggtggt
//
LOCUS       XM_071886586            2285 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904651), transcript variant X3, mRNA.
ACCESSION   XM_071886586
VERSION     XM_071886586.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2285
                     /gene="LOC139904651"
                     /note="uncharacterized LOC139904651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904651"
     CDS             357..1799
                     /gene="LOC139904651"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071742687.1"
                     /db_xref="GeneID:139904651"
                     /translation="MKDQAQMMNNNNQSNMMMSMGQALPPVMSQPQQQSQAMLNHRIG
                     GGGYGMWPPPQVEQLKFQNPNLKPPGIPLKPMGPRIGNNKNWKGKKGNDKWINNKVMA
                     GGGGGGGGASSNTGGGGSGGGAYNPPTLNELQQQNRLKARRYFPKKKFNHGGRSAPFA
                     PRNTTSFLIRAKKAGGITSLVSPCPVTPAVLPTPIFSPSREVLVDMAKEEWGVDGYGS
                     MKGLIRLRSGNEADAVEDEEEDEGGSSESDVEEHVEVERRLDHDLSRFEMIYPNYNGA
                     DYSSYNLENRVDDQDTHIAQLEEENLILKERLFLMEREFDDLRMRLQCLERQSRGVER
                     LNEEVVENDSENESESSRGYGRSMEENNDEINERSQNSEGNNNGATYATEVKQSDSVE
                     VADINKNLGVSTDVCMEEPADGPADVELKKVNNNGPADVELKKENSDGPAGGNVEKCN
                     VDVGLNTEVGDVSKEELESAKDVNEAQQME"
ORIGIN      
        1 acataacaag acctaaaacg ttacagaaca aatttcttga tattcatcag atcaaattaa
       61 atcaactatt taaatttgta taatttatta ttttaatttt atttctctta atcgcacaaa
      121 aatcgtgaat atcaagaatt aatcttgttg tctgataggt ttagggtttg ttaattttaa
      181 tccccaattt cctcaattcg tataatcggc cttaactata tattcatatc cttgttttat
      241 aattgaacat tttcaggatc ttaaaatcaa aaatcgaaac tctagggttt cgaattttta
      301 tctaattgct cttgattttg ctaaaataat tgaatttgat ccttgaattg aattagatga
      361 aagatcaggc gcagatgatg aacaacaaca atcaatcgaa tatgatgatg agtatggggc
      421 aagcgttacc gcctgttatg agtcagccac agcagcagtc acaggcgatg ttgaatcatc
      481 gaattggtgg cggtggttat ggaatgtggc caccaccaca agtggaacaa ttgaagtttc
      541 aaaaccctaa tttgaagcct ccaggcatcc ccttgaaacc tatgggacca cggattggta
      601 ataataagaa ttggaagggc aaaaagggaa atgataagtg gattaataac aaggttatgg
      661 ctggtggtgg tggtggtggt ggtggtgcta gtagtaacac cggtggtggt ggtagcggtg
      721 gcggtgctta taatccgcct acattaaatg aactgcaaca gcaaaatcgg ttgaaagcga
      781 ggaggtactt cccgaagaag aagtttaatc acggtgggcg atctgcgcct tttgcgccga
      841 gaaacactac ctcgtttcta attcgtgcga agaaagcggg tgggattacg tcgttggtgt
      901 caccgtgtcc ggtgacgcct gcggtgcttc cgacgccgat attttcgcca tctagagagg
      961 ttttggttga tatggcgaaa gaagagtggg gtgttgatgg gtatgggtcg atgaaagggt
     1021 tgatcaggtt aaggtctgga aatgaagctg atgcggttga ggatgaggaa gaagatgaag
     1081 gtgggtcgag tgagagtgat gttgaggaac atgtggaagt tgagaggaga ttggatcatg
     1141 atttgagtcg gtttgagatg atttatccga attataacgg ggcggattat agtagttata
     1201 atttggagaa cagggttgat gatcaggata cacatatagc tcaattggaa gaagagaatt
     1261 tgatattgaa agaacggttg tttttgatgg aaagggaatt tgatgatttg agaatgcggt
     1321 tgcagtgttt agagagacag agtaggggtg tggaacgact taatgaagag gttgtggaga
     1381 atgattctga aaatgagagt gaaagcagca ggggttatgg tcgctcgatg gaggagaaca
     1441 atgatgaaat taacgaaaga agtcaaaact ctgaaggtaa taacaatggg gcaacatatg
     1501 ctactgaagt taagcaatct gatagtgttg aagttgctga tattaataaa aatttaggtg
     1561 tttcaacaga tgtttgtatg gaagagcctg cggacgggcc agcagatgtt gaattaaaga
     1621 aagtaaacaa taacgggcca gcagacgttg agttaaagaa agaaaacagt gatgggccag
     1681 caggtgggaa tgttgaaaaa tgcaatgttg atgtcgggtt aaatactgaa gtaggagatg
     1741 ttagtaaaga agagcttgaa tctgcaaagg atgtgaatga agctcagcaa atggagtgaa
     1801 ttttggtttt aggaaccatt ctccacaatc tcttcatcaa gtctttctac ttttggactc
     1861 tgcctctgca caccttgatt gaaccatttt gtcaaaagca acgttcctct atttgcctat
     1921 taagtcatgt tgtaatctag ctttgagcat cttgatcatc aactcaaatc acgaaatggt
     1981 aactactgat cagcaacggt attatgctaa attggaagga aaatgaaaga ttgaatgatg
     2041 ggtatgttac gcatgcaagt gcattatcaa gatccgattg gtatacaata ttaccgaaat
     2101 ttgaatctgc acagatggta tttgagcagc aatgtcttgc aagttattaa acattaacat
     2161 actattttac taccaggtat tatggaacta ttgaaatttg tgtgatactg gtggttttaa
     2221 aaaagtgagc tttagtattc cgtaactatt gaattgaatg tacatcaata acaaagtgtg
     2281 gtggt
//
LOCUS       XM_071886587            2286 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904651), transcript variant X4, mRNA.
ACCESSION   XM_071886587
VERSION     XM_071886587.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2286
                     /gene="LOC139904651"
                     /note="uncharacterized LOC139904651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904651"
     CDS             357..1796
                     /gene="LOC139904651"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071742688.1"
                     /db_xref="GeneID:139904651"
                     /translation="MKDQAQMMNNNNQSNMMMSMGQALPPVMSQPQQQVMNNGPNNIN
                     NNNNNVPNPFMNQLMVNQSQSQAMLNHRIGGGGYGMWPPPQVEQLKFQNPNLKPPGIP
                     LKPMGPRIGNNKNWKGKKGNDKWINNKVMAGGGGGGGGASSNTGGGGSGGGAYNPPTL
                     NELQQQNRLKARRYFPKKKFNHGGRSAPFAPRNTTSFLIRAKKAGGITSLVSPCPVTP
                     AVLPTPIFSPSREVLVDMAKEEWGVDGYGSMKGLIRLRSGNEADAVEDEEEDEGGSSE
                     SDVEEHVEVERRLDHDLSRFEMIYPNYNGADYSSYNLENRVDDQDTHIAQLEEENLIL
                     KERLFLMEREFDDLRMRLQCLERQSRGVERLNEEVVENDSENESESSRGYGRSMEENN
                     DEINERSQNSEDVCMEEPADGPADVELKKVNNNGPADVELKKENSDGPAGGNVEKCNV
                     DVGLNTEVGDVSKEELESAKDVNEAQQME"
ORIGIN      
        1 acataacaag acctaaaacg ttacagaaca aatttcttga tattcatcag atcaaattaa
       61 atcaactatt taaatttgta taatttatta ttttaatttt atttctctta atcgcacaaa
      121 aatcgtgaat atcaagaatt aatcttgttg tctgataggt ttagggtttg ttaattttaa
      181 tccccaattt cctcaattcg tataatcggc cttaactata tattcatatc cttgttttat
      241 aattgaacat tttcaggatc ttaaaatcaa aaatcgaaac tctagggttt cgaattttta
      301 tctaattgct cttgattttg ctaaaataat tgaatttgat ccttgaattg aattagatga
      361 aagatcaggc gcagatgatg aacaacaaca atcaatcgaa tatgatgatg agtatggggc
      421 aagcgttacc gcctgttatg agtcagccac agcagcaggt aatgaacaat gggcctaaca
      481 atattaataa taacaataat aatgttccga atccgtttat gaatcagttg atggtgaatc
      541 aatcgcagtc acaggcgatg ttgaatcatc gaattggtgg cggtggttat ggaatgtggc
      601 caccaccaca agtggaacaa ttgaagtttc aaaaccctaa tttgaagcct ccaggcatcc
      661 ccttgaaacc tatgggacca cggattggta ataataagaa ttggaagggc aaaaagggaa
      721 atgataagtg gattaataac aaggttatgg ctggtggtgg tggtggtggt ggtggtgcta
      781 gtagtaacac cggtggtggt ggtagcggtg gcggtgctta taatccgcct acattaaatg
      841 aactgcaaca gcaaaatcgg ttgaaagcga ggaggtactt cccgaagaag aagtttaatc
      901 acggtgggcg atctgcgcct tttgcgccga gaaacactac ctcgtttcta attcgtgcga
      961 agaaagcggg tgggattacg tcgttggtgt caccgtgtcc ggtgacgcct gcggtgcttc
     1021 cgacgccgat attttcgcca tctagagagg ttttggttga tatggcgaaa gaagagtggg
     1081 gtgttgatgg gtatgggtcg atgaaagggt tgatcaggtt aaggtctgga aatgaagctg
     1141 atgcggttga ggatgaggaa gaagatgaag gtgggtcgag tgagagtgat gttgaggaac
     1201 atgtggaagt tgagaggaga ttggatcatg atttgagtcg gtttgagatg atttatccga
     1261 attataacgg ggcggattat agtagttata atttggagaa cagggttgat gatcaggata
     1321 cacatatagc tcaattggaa gaagagaatt tgatattgaa agaacggttg tttttgatgg
     1381 aaagggaatt tgatgatttg agaatgcggt tgcagtgttt agagagacag agtaggggtg
     1441 tggaacgact taatgaagag gttgtggaga atgattctga aaatgagagt gaaagcagca
     1501 ggggttatgg tcgctcgatg gaggagaaca atgatgaaat taacgaaaga agtcaaaact
     1561 ctgaagatgt ttgtatggaa gagcctgcgg acgggccagc agatgttgaa ttaaagaaag
     1621 taaacaataa cgggccagca gacgttgagt taaagaaaga aaacagtgat gggccagcag
     1681 gtgggaatgt tgaaaaatgc aatgttgatg tcgggttaaa tactgaagta ggagatgtta
     1741 gtaaagaaga gcttgaatct gcaaaggatg tgaatgaagc tcagcaaatg gagtgaattt
     1801 tggttttagg aaccattctc cacaatctct tcatcaagtc tttctacttt tggactctgc
     1861 ctctgcacac cttgattgaa ccattttgtc aaaagcaacg ttcctctatt tgcctattaa
     1921 gtcatgttgt aatctagctt tgagcatctt gatcatcaac tcaaatcacg aaatggtaac
     1981 tactgatcag caacggtatt atgctaaatt ggaaggaaaa tgaaagattg aatgatgggt
     2041 atgttacgca tgcaagtgca ttatcaagat ccgattggta tacaatatta ccgaaatttg
     2101 aatctgcaca gatggtattt gagcagcaat gtcttgcaag ttattaaaca ttaacatact
     2161 attttactac caggtattat ggaactattg aaatttgtgt gatactggtg gttttaaaaa
     2221 agtgagcttt agtattccgt aactattgaa ttgaatgtac atcaataaca aagtgtggtg
     2281 gttatt
//
LOCUS       XM_071886588            1586 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            plastid-lipid-associated protein 12, chloroplastic (LOC139904652),
            mRNA.
ACCESSION   XM_071886588
VERSION     XM_071886588.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1586
                     /gene="LOC139904652"
                     /note="probable plastid-lipid-associated protein 12,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139904652"
     CDS             35..1243
                     /gene="LOC139904652"
                     /codon_start=1
                     /product="probable plastid-lipid-associated protein 12,
                     chloroplastic"
                     /protein_id="XP_071742689.1"
                     /db_xref="GeneID:139904652"
                     /translation="MSCSSMELLGRLSFNHVPHINNRRILSHSVLAFPTHLGQKHHVV
                     KRRISCSAVDEEQQIQKVLFSDAENSLISSLIGIQGRGRSASPQQLKDVEQAVKVLEA
                     SKGIPDPTSSSLIEGRWQLVFTTRPGTASPIQRTFVGVDLFSVFQEIYLQTNDPRVSN
                     IVKFSDVIGELKVEAAATVKDGKRILFQFDKAAFSLKFLPFKVPYPVPFRLLGDEAKG
                     WLDTTYLSQSGNLRISRGNKGTTFVLQKQTEPRQKLLSAVSSGNSVIQAIEEFVTLNQ
                     NVSKGEQELAEGEWQMIWSSQMETDSWIENAANGLMGSQIVKENGGIKFLVDVLFGVK
                     FSMNGTFEKCGTNVYDVTMDDGAIVIGPYGLPVELVTKFKLEVIYSDDKIRITRGYSN
                     ILFVHIRVDR"
     misc_feature    227..766
                     /gene="LOC139904652"
                     /note="Region: PAP_fibrillin; pfam04755"
                     /db_xref="CDD:309752"
ORIGIN      
        1 atatctattc ttattttttt tgttttattt taaaatgagt tgctcctcaa tggagcttct
       61 gggaaggctt tcattcaatc atgttcctca tatcaataac agaaggattc tgtctcattc
      121 cgtactcgca tttccgacac atttgggtca gaaacatcat gttgtcaaaa gacgtatttc
      181 gtgttctgca gtcgatgaag aacaacaaat tcagaaagtt ttattcagcg atgctgaaaa
      241 ttcactgatt agtagtctca ttggtattca aggacgtggc cgttctgctt cgcctcaaca
      301 actcaaagac gtcgagcaag ctgtgaaagt tctagaagct tctaaaggta tccctgatcc
      361 gaccagctcg agcctgattg agggccgatg gcaattagtc ttcacaacaa gaccaggaac
      421 cgcttctcca attcaaagaa catttgttgg ggttgacttg ttcagtgtat ttcaagaaat
      481 ttatcttcaa acgaatgatc cacgcgtttc caatattgtc aaattctctg atgtcatagg
      541 tgagcttaaa gtagaggctg cagctacagt caaagatggg aaaaggattc tttttcaatt
      601 tgataaagct gcgttttcgc taaagtttct tccgtttaaa gtcccatatc cggtgccgtt
      661 tagacttttg ggtgatgaag caaaaggttg gctagatacg acgtatttgt cacaatctgg
      721 gaaccttcga atttcaagag gaaataaggg gacaacattt gtacttcaga agcaaacaga
      781 acctcgacaa aaactgcttt ctgcagtttc atccggtaat tcagtgattc aggcgattga
      841 agaatttgtt acgttaaacc aaaatgtatc caagggagaa caagaactgg ctgaaggcga
      901 atggcaaatg atatggagtt cacagatgga aacggacagt tggatagaga atgcagctaa
      961 tggtcttatg ggatcacaga ttgtgaaaga gaacggggga atcaagtttc ttgtagacgt
     1021 actattcggg gtcaaattct ccatgaacgg aacttttgag aaatgtggga ctaatgtgta
     1081 tgatgtgaca atggatgatg gtgcaattgt gatcggacca tatgggcttc cggttgagct
     1141 tgtaaccaaa ttcaaattgg aagtaatata ttctgatgac aagatcagga taaccagagg
     1201 gtatagcaac attctttttg tacacattcg tgttgaccgt tgaccaaata cgtatttggt
     1261 cagagtgtaa tgacaccaac atttgaggtt caggtacttt gaagaccgac ttcaaaactg
     1321 taattaagaa tgttccgact tcaaccatga cacataattc gttcggtttc ttgatatctg
     1381 tataaaagat gcaatgttct tccatggtgt ttagtgtgat tatggttggt tccaagatgt
     1441 tttcaacagc aagtcataat gtttatctaa ccatgtaatg tgccaattct aactttgttt
     1501 atagacaagt tttcactata tatggcctca aaatagccaa aggaaaatgt gtggatattt
     1561 acaaaaacat gaatgatgac aaaaac
//
LOCUS       XM_071886589            6239 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides callose synthase 9
            (LOC139904653), mRNA.
ACCESSION   XM_071886589
VERSION     XM_071886589.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6239
                     /gene="LOC139904653"
                     /note="callose synthase 9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins"
                     /db_xref="GeneID:139904653"
     CDS             202..5958
                     /gene="LOC139904653"
                     /codon_start=1
                     /product="callose synthase 9"
                     /protein_id="XP_071742690.1"
                     /db_xref="GeneID:139904653"
                     /translation="MSHRGHRDVDAGTLWERLVRAALRRERTGIDAYGRPAGGIAGNV
                     PSSLSNSRDIDPILRAADEIQDEDPNISRILCEHAYTLAQNLDPNSEGRGVLQFKTGL
                     MSVIKQKLAKKEGAAFDRSQDIARLREFYKLYREKNNVDMLREEEMELRESGTFSGNY
                     QELERKRVKRKRVFATLKVLGTVLEQLSKEVSPEEAEGLISEELKRVIESDAAMTEDL
                     IAYNIIPLDAPALTNAITSFPEVRAAISSLKYFRGLPKLPGNFPIPATRSADVLDFLH
                     FTFGFQKGNVSNQRENIVNLLSNEQSRLGVPDEHEPKLDETAVERVFLKSLDNYIKWC
                     NYLNIPPMWSNTDLNKEMKVLFISLYFLIWGEAANVRFLPECLCYIFHRMGEELDDIL
                     RQQLAKPAVSCVTDNGVSFLEQVICPLYDVIAMEADNNENGKAPHSAWRNYDDFNEYF
                     WSRSCLKLGWPMDRTSSFLLKPSPRSTNLLKTSATKRRGKTSFVEHRTFFHLYHSFHR
                     LWIFLFMMFQALTIIAFNNGKIDGKTIREGLSLGVTFFVMKLIQSALDVLVMYGAYST
                     TRMLAVSRIFVRFIWFSFATIFVCFLYLKGLQDTTNTISGSIIFKIYIIFLGIYAGIH
                     FFWSTLAKIPSCNLLVNRCDNSSVVKIIKWIHQEHYYVGRGMYEATTDYIMYVLFWLV
                     VLGGKFAFAYFLQIRPLVKPTREIINIKDIRYSWHDFVSKNNHNALTVASLWAPVFCI
                     YLLDIHIFYTIISAVVGFLLGARDRLGEIRSLGAVHKLFERFPEAFMDNLHIPVSARN
                     SLTLTGQVLAKNKFDAARFSPFWNEIVNNLREEDYITNLEMELLQMPKNSGSVPMVQW
                     PLFLLASKIFLAKDIAGESESQEELWDRISRDDYMKYAVEECFYTIKLILTSVLDDDG
                     KLWVERIYEDIKGSIARRSIPYDFQLKKLALVIQKVTALTGILKEVGTPELETGAVNA
                     ALDLYDVIQLDFLSVNMRENYATWSILIKARKEGRLFSKLKWPRDPELRSQIRRLHSL
                     FTIKDSAVYVPRNLEARRRLEFFTNSLFMSMPKSKPVREMLSFSVFTPYYSETVLYSI
                     NELLKKNEDGISVLFYLQKIYPDEWKNFLARIGRDENTHESVLIDNEDDNLELRFWAS
                     YRGQTLARTVRGMMYYRKALMLQAYLEKTTVGDMEADVPTNETTDTKGFEFSPEARAH
                     ADLKFTYVVTCQIYGKQKEDQKPEAADIGLLLQRNEALRVAFIDEVETLTAGNVNKEY
                     FSKLVKGDINGKDKEVYSIKLPGNPKLGEGKPENQNHAIVFTRGNAVQTIDMNQDNYF
                     EEALKMRNLLEEFHAYHGIRSPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVL
                     ASPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEY
                     IQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYFTTVGYYF
                     CTMLTVITVYIFLYGKLYLALSGVGEDIQTRADVLNNRALNAALNTQFLFQIGVFTAI
                     PMVLGFILEQGFLRAVVSFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGAKYHATGR
                     GFVVRHIKFSENYRLYSRSHFVKALEVVLLLVVYVSYGFNEAGAVGYILLSVSSWFMA
                     LSWLFAPYLFNPSGFEWQKTVEDFRDWTNWLFYRGGIGVRGEESWEAWWDEELSHIRT
                     FGSRVMETILSLRFFVFQYGIVYKLNVQGSNTSLSVYGFSWLVLVGLIFLFNIFTFSQ
                     KISVNFQLILRFIQGIAFLLAIAGIAVAVVLSSLSVTDIFASILAFIPTGWGILSICV
                     AWKPVLKKTGFLWKSVRSLGRLYDAGMGMLIFVPIALCSWFPFISTFQTRLMFNQAFS
                     RGLEISLILAGNNPNSGI"
     misc_feature    1258..1584
                     /gene="LOC139904653"
                     /note="1,3-beta-glucan synthase subunit FKS1, domain-1;
                     Region: FKS1_dom1; pfam14288"
                     /db_xref="CDD:464126"
     misc_feature    3316..5532
                     /gene="LOC139904653"
                     /note="1,3-beta-glucan synthase component; Region:
                     Glucan_synthase; pfam02364"
                     /db_xref="CDD:426739"
     polyA_site      6239
                     /gene="LOC139904653"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aactcttttc tctctctgat acacaatcac aaattcatat tccattactt taacaatttc
       61 gttcgtatga tttaattagt ataatttgat ttgattgatt gtatttatta tatctacacg
      121 acttaattcc atatatagat atagatttta gtatttgtga actcagatct tcggtgctgc
      181 catagtaaat ccggattata aatgtctcac cggggccaca gggatgtgga cgccggcact
      241 ttgtgggagc gtttggtccg ggctgcactt cgtagggaga gaacagggat tgatgcttat
      301 gggcggcctg ctggcggcat tgctggaaat gtcccatctt cactttcaaa tagcagggac
      361 attgatccca ttttaagagc agccgatgaa atacaagatg aggacccaaa catatctaga
      421 atattatgtg agcatgctta tacactggct caaaatctag atcctaacag tgaaggtagg
      481 ggcgtgctac agtttaaaac agggttgatg tctgtgatca agcaaaaact agcaaaaaaa
      541 gagggtgcag cctttgaccg gagtcaagac atagctcgtt tacgagagtt ctataagctt
      601 tacagagaga agaataatgt ggatatgtta cgtgaggagg aaatggaatt aagagagtcg
      661 ggtactttta gtggaaacta tcaagagtta gaacgcaaaa gggtgaagag aaaaagagta
      721 tttgcaactc ttaaagtctt gggaactgtt ttagaacagc tttctaagga ggtttcccct
      781 gaggaagcag aaggcttgat ttctgaagag ttaaaacgag tgattgaatc tgatgcagct
      841 atgacagaag acttgattgc ttataatatt attcctcttg atgctcctgc tttgacaaat
      901 gctattacat catttccaga ggttcgtgct gcaatatcat ccttgaagta ctttagaggt
      961 ctcccaaaat tgccgggaaa tttcccgata ccagctacta gaagtgctga tgttcttgac
     1021 tttttgcact ttacatttgg ctttcagaaa gggaatgtgt cgaatcagcg ggaaaatatt
     1081 gtcaatcttt tgtcaaatga gcaaagtcga cttggtgttc ctgatgagca tgaaccaaaa
     1141 ttagatgaga ctgctgtgga gagagtattt ttgaagtctc ttgataatta catcaagtgg
     1201 tgcaattacc ttaatatccc gccaatgtgg agcaatacgg atctcaacaa ggaaatgaaa
     1261 gtacttttta tctccttgta cttcttaata tggggtgaag ctgctaacgt gcgattcctt
     1321 ccagaatgtt tatgctacat atttcatcgt atgggggaag aattggacga tatattgagg
     1381 cagcaacttg caaaaccagc tgtcagctgt gtaaccgata atggtgtttc gtttcttgaa
     1441 caagtcattt gccctcttta tgatgttatt gctatggagg ccgataacaa tgaaaatggg
     1501 aaggctcctc attctgcatg gagaaattat gacgatttca atgagtactt ctggtctcgt
     1561 agttgtctta aacttggctg gcctatggac cgaacttcat ctttcctgtt gaagccttca
     1621 ccaaggtcaa cgaatttatt gaaaaccagc gctactaagc gtcgaggaaa aacctctttc
     1681 gttgagcacc gaacgttctt tcatctttac catagtttcc accgtttgtg gatatttctt
     1741 ttcatgatgt ttcaggcgct tacaataata gcatttaata atggaaaaat tgatggcaaa
     1801 acaatacggg aaggtttaag tcttggcgta acattttttg tcatgaagct tattcaaagt
     1861 gcgttggatg ttttggtgat gtatggtgcc tattctacaa caagaatgtt ggcggtttca
     1921 cggatttttg ttcggttcat ctggtttagt tttgccacta ttttcgtatg cttcctttat
     1981 ttgaaaggtc tccaagacac gacaaataca atttcagggt ctattatttt caaaatatat
     2041 ataatctttc taggcatcta tgccggtatt catttctttt ggagcacatt ggctaaaata
     2101 ccatcgtgca atcttttggt caaccggtgt gataattcat ctgtagtgaa aataatcaag
     2161 tggattcatc aggagcatta ttacgttggt cgtggcatgt acgaggcaac aactgattat
     2221 atcatgtatg tgcttttctg gcttgttgta ttggggggca agtttgcatt tgcctatttt
     2281 ctccagatta gacctttggt gaaaccaaca agggaaatca tcaatattaa agatatccgt
     2341 tattcatggc atgattttgt atcaaaaaat aatcataatg ccttgaccgt tgctagtttg
     2401 tgggcgcctg tcttttgtat ctatctttta gatatccaca tcttttatac cattatatct
     2461 gctgttgtgg gtttcttgct tggagctaga gatcgtcttg gtgagattag gtctttgggt
     2521 gccgtccaca aactctttga gaggtttcct gaggcattta tggataatct tcatattcct
     2581 gtatctgcaa ggaattctct tacactaacg ggtcaggttc tggcgaaaaa taagtttgat
     2641 gctgcacgat tttcaccctt ctggaatgag atcgtgaata atttgcgaga agaagattat
     2701 attactaatc tggaaatgga attacttcaa atgcctaaaa attccgggtc tgttcctatg
     2761 gttcagtggc ctctttttct tctagccagc aagatatttc tagccaaaga tattgctggc
     2821 gagagtgagt cacaagaaga actttgggat aggatttcaa gggacgacta catgaaatat
     2881 gcagttgaag agtgttttta taccatcaag ctaattttaa cttcagtttt ggatgatgat
     2941 gggaagttgt gggttgaaag aatatacgaa gatattaaag gaagtattgc gagaagaagc
     3001 atcccatatg actttcaact gaaaaaactg gcacttgtta ttcaaaaagt tactgcactt
     3061 acgggaattc tgaaagaagt tggaacacct gagttagaaa ctggtgctgt taacgctgct
     3121 ctggatcttt acgatgttat ccagcttgat tttcttagtg tcaatatgag agaaaattat
     3181 gccacgtgga gtatattgat aaaagcaagg aaggaaggtc gcctgttttc gaagttgaag
     3241 tggccaagag atcctgagtt gaggtcacaa attagaaggc tacactctct tttcaccatc
     3301 aaggattcag cagtgtacgt ccctagaaac ctagaggcta gacgtagatt ggagttcttc
     3361 acaaattcac ttttcatgtc catgcctaaa agcaaacctg tgcgggaaat gttatctttc
     3421 agtgttttca ctccatatta ttcggagact gttctgtaca gtataaatga gcttctcaag
     3481 aaaaatgaag atgggatttc ggtattgttt taccttcaaa aaatctatcc agatgaatgg
     3541 aaaaactttc ttgctcggat tggtcgagat gagaacacac acgagtcggt tcttattgat
     3601 aatgaagacg ataaccttga acttcggttt tgggcatcat atcgtggaca aacattagct
     3661 agaactgttc gagggatgat gtactatcgg aaagctctaa tgcttcaagc ttatttggaa
     3721 aaaacgactg ttggagatat ggaagcggat gttcctacta atgaaacaac tgatactaaa
     3781 ggatttgagt tttctcctga agcacgagct catgctgacc taaaattcac atatgttgta
     3841 acatgccaaa tatatgggaa gcagaaagaa gatcaaaagc ctgaggctgc tgatatcgga
     3901 ttactattac aaagaaatga ggcacttcga gttgctttca ttgatgaggt cgagactttg
     3961 acagctggta atgtgaacaa agagtatttt tctaaactcg tgaagggtga tatcaacggg
     4021 aaagacaagg aagtttattc tataaaattg cccgggaatc ccaaacttgg tgagggtaaa
     4081 cccgaaaatc aaaatcatgc aattgtcttt actcgtggaa atgctgtcca gacgattgat
     4141 atgaaccaag acaactactt cgaagaagct ctaaagatga gaaatcttct agaagaattc
     4201 catgcttatc acggtatccg ttctcctacc attcttggtg taagggagca tgtatttact
     4261 ggaagtgtgt cttctttagc atccttcatg tctaatcaag aaaccagttt tgtaaccctt
     4321 ggacagcgtg tacttgcaag tcctttaaag gtccggatgc attatgggca tcctgacgtg
     4381 tttgataggg tgttccatat aacacggggt ggtattagca aagcctctcg tgtaattaac
     4441 attagtgaag atatatacgc tggtttcaat tcaactctga gacagggaaa catcacacat
     4501 cacgagtaca tacaggtagg caagggacga gatgtcgggc tgaatcagat tgctctgttt
     4561 gaaggcaagg ttgctggtgg aaatggcgag caggttctta gtagagatat atatagactc
     4621 ggacagctat ttgacttttt ccggatgctt tcattctact tcacaactgt cggttactac
     4681 ttttgtacta tgttgacagt aattactgtt tacatatttc tttatgggaa gttgtatttg
     4741 gcgttgtctg gagtgggtga agatattcaa acgagagctg atgtgttaaa caacagagcg
     4801 cttaatgcag ctttgaatac gcaatttctg tttcagattg gtgtgtttac ggctataccc
     4861 atggttttgg gttttatctt ggagcagggc ttcttaaggg ctgttgttag ttttatcaca
     4921 atgcaatttc aactttgtac cgttttcttc acattttcgt tgggcacaag aacccattac
     4981 tttggccgaa cgattcttca tggaggtgca aagtatcatg caactggtcg gggattcgtt
     5041 gtaagacaca tcaaattttc agagaattac cggctttatt cgcgcagcca ttttgttaaa
     5101 gcactggaag tcgttttgtt gttagtggtg tatgtttcat atgggttcaa cgaagctggt
     5161 gcagtgggtt acattcttct cagtgttagc agttggttca tggctctttc ttggcttttt
     5221 gctccatact tatttaaccc ttccggtttt gagtggcaga agacggttga ggactttcgg
     5281 gattggacaa attggctctt ctataggggc ggtattggtg tcagaggtga agaaagttgg
     5341 gaagcttggt gggatgaaga attgtctcat atcagaacat ttggttcaag ggttatggag
     5401 accattttga gccttaggtt tttcgttttc cagtatggta ttgtttacaa gctgaacgtt
     5461 caaggatcca atacgtcatt atcggtgtat ggattttcgt ggcttgtact tgtgggccta
     5521 atattccttt tcaatatatt cacattcagc cagaaaatat cagtcaattt tcaactgatt
     5581 ttgcgattta tacaaggcat tgcattcttg ctagcaattg ctggaatagc cgtcgctgtt
     5641 gtgctttctt ccctttcggt taccgacata tttgcttcca ttttagcatt cataccaacc
     5701 ggttggggaa tactttcgat ctgtgtggct tggaaacccg tgttgaaaaa gactggattt
     5761 ttatggaagt cggttaggtc tcttggtcgg ttatatgacg ctggaatggg aatgctgata
     5821 ttcgttccaa ttgcgttatg ttcatggttc ccttttatct caacgttcca aacccggcta
     5881 atgtttaacc aggctttcag tcgaggtttg gaaatatcac tcattcttgc ggggaacaac
     5941 ccaaattctg ggatttaggt gtgatcttga atctggacct ttgtacatgc agtgagctta
     6001 acttagactt actctcagat atttaattgc agattgtaac tgtgatgtat ataaatgata
     6061 tgcttgtaaa ttttgtagta ctgagtgagt gtatcttgta tgaggaattt gtgtgggcgc
     6121 atattgggct gccatgacta tgggaacttt cgtctccctt tgttattgtg tttctagtga
     6181 cattttggct agtgtttgaa tcaactaatg attaatgata taatataatt tgttgttca
//
LOCUS       XR_011778923             587 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904654), ncRNA.
ACCESSION   XR_011778923
VERSION     XR_011778923.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..587
                     /gene="LOC139904654"
                     /note="uncharacterized LOC139904654; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904654"
     ncRNA           1..587
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904654"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904654"
ORIGIN      
        1 tgtttagtaa tcaaatctcc ttaatagcgg agatcttcaa aatccgttac aaacccttct
       61 ttgcatacga tttgatcgtc tcttcttttc ccacccattt tcaatttcga atagcataca
      121 tgaactataa aaagacacca cgcctctttc aaatcatcat tcatgtccca aattattcag
      181 taaagataag gatatgaagg ctatctaaca aagttgcagg atcatttatg gatgttgaga
      241 tatgaaggat gttaacaaag ttgaaggatc tcaacaagcc aaagggtgtt gagtttcttt
      301 agctatgctt ttcttcacgc tttaagtctt cctttggttg aattacaaaa tggctatgac
      361 gaaaccgata gacacaatca cacaaacatc atgtttccat tcgagtttac tagtcaagaa
      421 gaaaactaat gaatactcta ccgacttgta gatacctttg tatgtcactt tatatttatg
      481 accacaagtg gtgtataaat ttaaatctta agcaagcacg atcataactg cccattcgaa
      541 actattacag aaacaaaaga gaggtatatc taagaagtta tagacaa
//
LOCUS       XM_071886590             878 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904655), mRNA.
ACCESSION   XM_071886590
VERSION     XM_071886590.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..878
                     /gene="LOC139904655"
                     /note="uncharacterized LOC139904655; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904655"
     CDS             402..878
                     /gene="LOC139904655"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742691.1"
                     /db_xref="GeneID:139904655"
                     /translation="MERFTEMSDEYDEAVKAANAQEKRAQRAKAKLKKATEEIARLNR
                     KANTAEHEFAQLVKYLPKFADKVMDSKPVTEKFQAYAQAAKLATRCEWHDLLCKLGDL
                     SQPLPSDMANEICATDDAREALEKAKKEVEKVSIPALEELSQRDGVSFADIKALEL"
     misc_feature    <432..566
                     /gene="LOC139904655"
                     /note="MobC-like protein; Region: MobC_2; cl44929"
                     /db_xref="CDD:479920"
ORIGIN      
        1 ttactggtgg cgaggaccgc gacaaacgaa aagttgcgga aggtgccccc actccacgca
       61 aaagatgact tcggtctctt tctgaacaag aaacaaagtc atccgctgaa gccgcaccgc
      121 tctacaataa tagggggagc atccccgcag atgttcttga agagcccgag cgtaaagatt
      181 tatctcttcc atctgacgca gaagcgtcta atcaagaagg agaaggagaa gctgatgcag
      241 aagaaaccgc ggccgcagaa caggccaaca aattatacca cagactctat aaatttctcc
      301 ccaaggagac aaaggataaa tatcgcagtt tatcataccc cgaagctgca agacagcgat
      361 tgtacaattg ttataatgct ctttgtctta ctgttgacag catggagcga ttcaccgaaa
      421 tgtcggatga atatgatgag gcagtgaagg ctgccaacgc tcaggagaaa agagcgcaaa
      481 gagctaaagc aaagcttaaa aaggcaactg aagagatcgc caggcttaat agaaaggcga
      541 acactgcaga acatgagttc gctcagcttg tcaagtattt acccaagttc gcggacaaag
      601 taatggattc aaaacctgtt actgagaaat ttcaggcgta tgcccaagcc gcaaaacttg
      661 caacacgctg tgaatggcat gatcttttat gcaagcttgg cgacctttct caacccctac
      721 cttctgacat ggcgaatgaa atatgcgcca cagacgatgc tcgcgaagcg cttgaaaagg
      781 cgaagaagga ggttgagaag gtgagcattc ctgccttgga ggagcttagc cagcgtgacg
      841 gcgtttcgtt cgcagatatt aaagcattag agctttaa
//
LOCUS       XM_071886591            1315 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative ALA-interacting
            subunit 2 (LOC139904656), mRNA.
ACCESSION   XM_071886591
VERSION     XM_071886591.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1315
                     /gene="LOC139904656"
                     /note="putative ALA-interacting subunit 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139904656"
     CDS             1..720
                     /gene="LOC139904656"
                     /codon_start=1
                     /product="putative ALA-interacting subunit 2"
                     /protein_id="XP_071742692.1"
                     /db_xref="GeneID:139904656"
                     /translation="MVGTSVKNAAIHQLTQQTLPACKPVSTPAWVIGTFFFMGVIFIP
                     VGLISLHASQSFTLYLQVNEIVDRYDADCVPDRFKNNKVAYIKNASMPKSCHRYLKVH
                     KPMKAPIYIYYQLENYYQNHRRYVKSRSDDQLLHGLGYNKTSTCEPLALENGLPIVPC
                     GLVAWSLFNDTYSFSRGTKKLKIERKNIAWKSDQAHKFGKDVYPFNFQNRSFIGGGKL
                     DTSIPLLFQVFVNYMGESKRI"
     misc_feature    148..>684
                     /gene="LOC139904656"
                     /note="LEM3 (ligand-effect modulator 3) family / CDC50
                     family; Region: CDC50; pfam03381"
                     /db_xref="CDD:460906"
ORIGIN      
        1 atggttggca cgtcagtcaa aaatgccgct atacatcagc tcacccaaca aacgctccct
       61 gcttgtaaac ctgtatcaac accggcatgg gtcattggga cattcttttt tatgggcgtc
      121 atattcattc ctgttgggtt aatttcactt catgcttcac aaagttttac gttgtacttg
      181 caggttaatg aaattgtgga tagatatgat gctgattgtg taccagatag gtttaagaac
      241 aacaaggtag cttacatcaa gaatgcatca atgccaaaaa gttgtcaccg ttatctaaag
      301 gtgcataaac ctatgaaagc tccaatttac atttattatc agctggaaaa ctattatcaa
      361 aaccacaggc ggtacgtaaa aagtcgaagt gacgatcaac tattacatgg acttggatac
      421 aacaaaacaa gtacatgtga acctctagca cttgaaaatg gtctcccaat agtcccttgt
      481 ggattagttg catggagttt atttaatgac acatattcct tttcacgcgg gacaaaaaaa
      541 ctgaaaatcg aacgaaaaaa cattgcatgg aagagtgatc aggctcataa atttggcaaa
      601 gatgtttatc cattcaattt ccaaaatcgc tccttcattg gtggggggaa gctagataca
      661 tccatcccac tgcttttcca agttttcgta aattatatgg gagaatcgaa gaggatttag
      721 aaaagatgac ataatagtag tacgtcctat gaacaattat gacacttaca gttttggtgg
      781 aacaaaaatg cttgtactgt caacatcaag ctggttggga gggaagaaca gttttcttgg
      841 tgtggcctac atcttcgttg gatcttcgtc tatactcatt gctttaattt tcttgttgct
      901 tcatgtaaaa aatccaagac cgtatggaga cacagtatac ttacctagca acaggaagga
      961 tatctctagt taagaggtag cccgcatatt caaaaagtgt aaaacaagag atggtgatct
     1021 ttgaagtttt gtgtgtttat attggatcag attcactaac tgtcatttag atctgcgatg
     1081 gactgggaat cctccaaata tgtacgacat tagtggaagt gcacacttta ttaacaaatg
     1141 tgataatgga attgttgttc atcgaaatag ggatccagag gcaggtgcaa tggatttagt
     1201 acagatatgt gtgcggaagg tacggaataa agtctcagga acgataggtg atgcatactt
     1261 gcaatataag actggacaca acgcagcgtc aaaagcaatc gcgtcagacg aggtg
//
LOCUS       XM_071886592             824 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine carboxypeptidase-like
            16 (LOC139904657), mRNA.
ACCESSION   XM_071886592
VERSION     XM_071886592.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..824
                     /gene="LOC139904657"
                     /note="serine carboxypeptidase-like 16; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139904657"
     CDS             1..633
                     /gene="LOC139904657"
                     /codon_start=1
                     /product="serine carboxypeptidase-like 16"
                     /protein_id="XP_071742693.1"
                     /db_xref="GeneID:139904657"
                     /translation="MITPYKILDKKRGYILCSPFTNKFKDFNSRFEYAHRNALISDDI
                     YMSAIKNCQGNYVSIDSANSFCASSLKRYEECTSRITLDNILEPFCDENDPTLDCDNN
                     RYIETWANIDIVQQARHVRQGKIGKWELINQTLHYNQGKNDTFCYSYDIFSSYSYHKK
                     LFTKNCRVLIFSGDQDMTFPYVGVEEWITALNVGVEVPWKPFYVDGQVGG"
     misc_feature    <34..630
                     /gene="LOC139904657"
                     /note="serine carboxypeptidase; Region: PLN02209; cl08270"
                     /db_xref="CDD:471799"
ORIGIN      
        1 atgatcactc catacaagat attagacaag aagagaggat acattctttg tagtcctttc
       61 accaataagt tcaaggattt caattctaga ttcgagtatg ctcatcgtaa cgcacttata
      121 tcagacgata tctacatgtc cgcgataaaa aattgtcaag gaaattatgt aagtattgat
      181 tcggccaatt cattttgtgc aagcagcctt aagaggtatg aagagtgcac aagtcgtatt
      241 acgctggata acattttgga acctttttgt gacgaaaatg atccaacgct ggattgtgat
      301 aataaccgct acatagagac atgggctaac attgatattg tgcaacaagc tcgccacgtt
      361 cgtcagggaa aaatcggtaa atgggaattg attaaccaaa cattgcatta caatcaagga
      421 aagaatgaca cgttttgtta ttcgtatgat atatttagta gttattctta tcataagaaa
      481 ctctttacca aaaattgtcg agttttgatt ttcagtggtg atcaagatat gacatttccg
      541 tacgttggtg tggaggaatg gataaccgca ctgaatgttg gagttgaagt cccatggaaa
      601 ccattctatg ttgatggtca agtcggaggg tgatgaaatg tcccgttcat attgattata
      661 tacgttccat attaattgat ttcgtcgcga ggttttgacc tctatatgag acgtttttca
      721 aagactgcat tcatttttaa aacaaccata acctttattt tatcgataaa ggtttaaaaa
      781 gtattacgta gattatcaaa taatgataat ctaaaatgta ccgt
//
LOCUS       XM_071886593            1672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904659), partial mRNA.
ACCESSION   XM_071886593
VERSION     XM_071886593.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..1672
                     /gene="LOC139904659"
                     /note="uncharacterized LOC139904659; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139904659"
     CDS             <1..1512
                     /gene="LOC139904659"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742694.1"
                     /db_xref="GeneID:139904659"
                     /translation="AQDLPRTFPGHPALNEEGRNSLRRVLLAYARHNPDVGYCQAMNF
                     FAAMLLLMMPEENAFWTLVGMIDDYFEGYFTTDMIESQVDQLVFEDLMRERYPKLVNH
                     FDLMGVEMGWICGPWFLSIFVNIIPWESVLRVWDVLLFEGNRVMLLRTALALMELYGP
                     ALGTTMDAGDAITLLQSLVGSTFDSSNLVVTACISFSNVTEDILENLRQKHRPDVVTA
                     VQERIKGEHRKRSSKGLATKLYSFKQEREPLVREPSIKIKRFGDKNSEIEDVMDLMSP
                     LKPDESLNMEPFNKEVDSITDIQDQVIWLKAQLCSMLEDKRSATIRAEELETALMEMA
                     QQDNRRELSARVEYMEQEVNELQQLLIDKKEQEKAMLEVLMRVEQEQKIAEEARLSAE
                     QDASAQRYLVRVLEGKYEQTMSALAQMEKRAVMAESMLEATLQYNSSQGKATLTPTPT
                     PAPAPPPGNMHTEAVRDNNTRKPGLLSFGLGWRDKNKGKQSNDAESANSNQEP"
     misc_feature    4..486
                     /gene="LOC139904659"
                     /note="Rab-GTPase-TBC domain; Region: RabGAP-TBC;
                     pfam00566"
                     /db_xref="CDD:459855"
     misc_feature    <658..>1305
                     /gene="LOC139904659"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
ORIGIN      
        1 gcgcaggatt taccacgaac atttccaggt catcctgcac taaacgagga aggtaggaac
       61 tctttaaggc gggtgctgtt agcatatgca cggcacaacc ccgatgtagg gtattgtcag
      121 gcaatgaact tttttgctgc aatgctacta ctaatgatgc ctgaagaaaa tgccttttgg
      181 actttagttg gcatgattga tgattatttt gaaggttact tcacaacaga catgatagaa
      241 tcccaggtgg atcaacttgt ttttgaagat ttgatgcgtg aacgatatcc taaactagtc
      301 aatcattttg atctcatggg agtggagatg ggatggatct gtgggccatg gtttctttcc
      361 atctttgtaa atattatacc atgggaaagt gttcttcgtg tttgggacgt gcttttattt
      421 gaaggaaacc gtgtaatgtt attgcggact gcattggctt taatggagct atatggtcct
      481 gctttgggta caactatgga tgctggagat gctattacct tattgcaatc acttgtgggc
      541 tccacatttg atagtagcaa cctagttgta actgcttgca taagcttttc taatgtaacc
      601 gaagatatac ttgaaaatct tagacaaaaa catagaccag atgtggtaac tgcagttcaa
      661 gaaagaatta aaggggaaca tagaaagaga agttctaaag gacttgctac taagctttac
      721 agtttcaaac aagaacgtga accacttgta cgcgaaccga gtataaagat taaacgattt
      781 ggtgataaaa attctgaaat tgaagatgtt atggacttga tgtctcctct taaaccggat
      841 gaatctctta atatggaacc gtttaataaa gaagtagact caattacaga tatccaggat
      901 caggttattt ggctgaaggc tcagttgtgc tcaatgttgg aggacaagag atctgctaca
      961 attagagctg aggaattgga gacagcactt atggagatgg ctcaacaaga taatcgacgc
     1021 gaactgagcg caagggttga gtacatggaa caagaagtaa atgaactgca acaacttctt
     1081 atcgataaga aagaacagga gaaagcaatg cttgaggtgc taatgcgagt tgaacaagaa
     1141 caaaaaattg cagaggaggc tcgtttatct gcagagcaag atgcatccgc tcagagatat
     1201 ttggttcgtg tactcgaggg gaagtatgag caaactatga gtgcacttgc tcaaatggaa
     1261 aagcgggctg taatggcgga atctatgtta gaggcgacac tgcaatacaa ttctagtcaa
     1321 ggcaaagcaa cactaacacc aacaccaaca ccagcaccag caccgccacc tgggaacatg
     1381 cataccgagg ctgttagaga caacaacaca agaaaaccag gtttactttc atttggacta
     1441 ggatggcgtg acaaaaacaa gggaaaacaa tcaaatgacg cagaatcagc taatagtaat
     1501 caagaaccat aaaaataaga gatggatgaa gataacttac tcaccttggt acaagcttct
     1561 aatgctgtgt gtttgcacat ggaaattctc caattcattc atgttgataa tcatgctgaa
     1621 gctacacata actttattta tctatttttg gtacattata tatgtttatt tt
//
LOCUS       XR_011778924             631 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904660), ncRNA.
ACCESSION   XR_011778924
VERSION     XR_011778924.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..631
                     /gene="LOC139904660"
                     /note="uncharacterized LOC139904660; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904660"
     ncRNA           1..631
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904660"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904660"
ORIGIN      
        1 aaatcggaaa cacaatctcc taacaacata gattgacaac attttttttt tcctatatcc
       61 gttattggta ttagtagtag taaaaatctc aatcaggaca tatggatgga cagatatgtt
      121 gcatggtgat gagggttaac cttgattgta actcatgttg cagaaagatg aggagaaaca
      181 ttttaaatat gaaagagata gagaagcact taatagaaaa acaacaaaac agggttagcg
      241 tttgtgggag gtttaaaccc gcggatgttg ctataaaact aagaaaaaag atgaatcggc
      301 gagttgaaat tcttgaaata gaagagatgg ctactcgcta cgaggtcaaa caagaaacgc
      361 caatcataaa tcattacaag tactattgaa ggtccgaaca tatgaattta cagtactgtt
      421 tcaaattttt tcaattggtg cgaggaagcc ttaaaacatg gcgaaacaat caaatgtcaa
      481 tgaacataga tatgtcatgc gtacatattt gcatgctttt gcacacaacg gtgcaaacat
      541 tatggcaaca aaggtgtggt tgttatctta ttgtttaatt gtaagtttac aatttttatt
      601 attaaactct ctcattaagt tgtatataat a
//
LOCUS       XM_071886594            2708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904661), mRNA.
ACCESSION   XM_071886594
VERSION     XM_071886594.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2708
                     /gene="LOC139904661"
                     /note="uncharacterized LOC139904661; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904661"
     CDS             264..2708
                     /gene="LOC139904661"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742695.1"
                     /db_xref="GeneID:139904661"
                     /translation="MQQKILSFYKRKPDTTNNTNEDSKRAKASTSDIEQNRNEPEVQV
                     TETHEPDVETTDLNSLERDPGKRKRMWEYSKNEREKIRRDYLKMGPYQIQLQEYPSKG
                     SKKQARRFQYSWFKIFSNWLEYSPTKDVVYCFLCYLFEDKQNVHNGGDAFTVKGFNSW
                     KKVNDGKRCAFLKHIRSSHHKDAIVYSENLLNQAAHIDSIIEKRSKEKVLQNRLRLKA
                     TVDIVRWLTFQACAFRGHDETRNSKNRGNFLELLKLLASYNDELANVVLENAPYNSQY
                     IAASIQKELLGIIANKVRKHIRSEVGDSYFCVMVDESRDESKKEQMAIVLRFVDNDGV
                     IRERFLDLVHVSDTTSVTLKTCLWKQLLLYEFDTSKIRGQGYDGASNMRGEWNGLQAL
                     IRKECPFAYYVHCFAHRLQLALVAASREVIPVHQFFSNLTFITNVICASSKRHDELQK
                     AKSIEIKHLLELGEIETSKGGHQVGTLKRAGDTRWGSHFHSVCNLLNMFNATREVLKS
                     IIEDGTYSSQRAEADTAYRYLISFEFVFILHLVKEIMGRTDILSQALQKKTQDIVNAI
                     RLVSTTKRSLNEYRNDGWDSLFAKVTLFSEKHHIDIPDMKALYKSTRYRPRRQDNHVT
                     VEHYYRVDLFICTVDKQLQELDSRFNEQAMELLTLGSLLLPTKDMELFDIDKICLLVE
                     KYYPTDFTEQEINMLRYHLELFRIELIENPKFKDVSTIAQLCTSLAETNKCEPYYLID
                     QLIRLILTLPVSTATTERGFSAMKIFKNRLRNKMSDDFLASNLVVYIEKDIAQRFDSA
                     SVISDFKDLKGRRAEL"
     misc_feature    711..1427
                     /gene="LOC139904661"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    <2484..2636
                     /gene="LOC139904661"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 agggtgcatg tccccccaaa cttttgacta attgctataa atttaatatt atatgggttt
       61 aaataatatt aattttacaa gtttgccctt ccagaaaatt aaaagtagcc cttccaagtc
      121 caagttccaa atatttaagg ggaaaaaaaa aaacaatccc tcaaataaaa aaacccaact
      181 tgcttatctc acaagccgct cttcatcgtc attgatttcc gatcaatttc cttctgagtg
      241 tcaagtgtta ttggtttttt gtaatgcaac aaaaaattct ttcgttttac aagaggaaac
      301 ctgacacaac aaacaacaca aatgaagata gtaaacgtgc taaagcttca acaagtgata
      361 tcgaacaaaa tcgaaacgaa ccagaggtcc aagttactga aacacacgag ccggatgttg
      421 agacaacgga tcttaattct ttagaaagag atcctggaaa gagaaaacgt atgtgggagt
      481 attcaaaaaa tgagagggaa aaaattagaa gagattattt aaaaatgggc ccatatcaaa
      541 ttcaattgca agaataccct agcaaaggtt caaagaaaca agctcgtagg tttcaatatt
      601 catggtttaa aattttttct aattggttag agtattcacc tacaaaagat gtcgtgtatt
      661 gctttctatg ttacttattc gaagacaaac agaatgtgca taatggagga gatgcgttta
      721 cagtcaaagg atttaatagt tggaaaaagg tgaatgatgg aaaaagatgt gcgttcctta
      781 agcatattcg tagttcacac cataaagatg ctattgttta tagtgagaat ctactaaacc
      841 aagcagcaca cattgacagt atcatagaga aacgaagcaa agagaaagtt ttacagaatc
      901 gtttacggtt aaaagctaca gttgacatag ttcgttggtt gacttttcag gcatgtgctt
      961 ttcgaggaca cgatgaaact agaaactcaa agaatagagg taattttctt gaattgttaa
     1021 aacttttagc gtcatataat gatgaacttg ccaatgttgt gttggagaac gccccatata
     1081 actcacagta tatagcagcg tcgatccaaa aagaactctt aggaatcatt gcaaataagg
     1141 ttcgaaaaca tattcgcagt gaagtgggtg attcgtactt ttgtgtcatg gttgatgaat
     1201 cacgagatga gtccaaaaag gagcaaatgg ctatagttct aaggtttgtt gataatgatg
     1261 gtgtgattag agaacgattt ttggatcttg tacatgttag cgatactaca tcagtaaccc
     1321 ttaagacatg tttatggaaa caacttttgc tttacgagtt tgatactagt aaaattcgtg
     1381 gccaaggtta tgatggtgcg agtaacatga gaggggagtg gaatgggtta caagcgctta
     1441 ttcgtaaaga atgtcctttt gcatactatg ttcattgttt tgcacataga ttgcaacttg
     1501 ccttagttgc tgcttcacga gaagttatac cggttcatca atttttctca aatttgactt
     1561 tcattactaa tgtcatttgt gcttctagta agcgccacga tgagttacaa aaagctaagt
     1621 caattgagat taaacattta ttggaattag gtgaaatcga aacaagtaag ggaggtcatc
     1681 aagttgggac tttaaaacga gctggtgata cacgttgggg ttctcatttt cattctgttt
     1741 gtaacttgct taacatgttt aatgccaccc gtgaagttct taagagtatt attgaagatg
     1801 gaacgtactc atctcaacgt gctgaagctg atacggctta caggtatctc atatcatttg
     1861 agtttgtatt tattttgcac ttagtaaagg aaataatggg aaggactgat attctgtctc
     1921 aagctcttca aaagaaaact caagatattg ttaatgccat ccgtcttgtg tcaacaacaa
     1981 agagaagcct taatgaatac agaaatgatg gttgggattc gctatttgca aaggtaacgt
     2041 tgttctcaga gaaacaccat atagatatac ccgatatgaa agctctttat aagtctaccc
     2101 gatatcgtcc tcgtcgacaa gataatcatg ttactgttga acattattat cgtgtagatt
     2161 tatttatttg caccgtggac aagcaattgc aggagctcga cagtaggttc aatgagcaag
     2221 ccatggaatt gttaactctt ggctctttat tactgcctac aaaagatatg gaattgtttg
     2281 acattgataa gatttgtctt ctagttgaga aatattatcc aacagatttc acagaacaag
     2341 agattaatat gttgagatat cacttggagc tttttagaat tgaattgatt gaaaacccaa
     2401 agtttaaaga tgtttctact atcgctcaac tatgcacgag tcttgcagaa actaacaagt
     2461 gtgagccgta ttatttaatt gaccaattga tcagactcat tttaacactt cctgtttcaa
     2521 ctgctacgac tgagagggga ttttcagcga tgaaaatatt taaaaatcga cttcgcaaca
     2581 agatgtctga tgattttcta gcatccaact tggtggttta catagaaaaa gatattgctc
     2641 aaagatttga ttcagcgtct gtcataagtg actttaaaga cctaaaaggt cgtcgcgccg
     2701 agttgtag
//
LOCUS       XM_071886595            1104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At5g07610-like
            (LOC139904663), mRNA.
ACCESSION   XM_071886595
VERSION     XM_071886595.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 88% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1104
                     /gene="LOC139904663"
                     /note="F-box protein At5g07610-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139904663"
     CDS             1..1104
                     /gene="LOC139904663"
                     /codon_start=1
                     /product="F-box protein At5g07610-like"
                     /protein_id="XP_071742696.1"
                     /db_xref="GeneID:139904663"
                     /translation="MHAVESNDDLLIEILLRLPVISLVLFRSVSKRWLSIINNPHFVT
                     LLRQIIPKSEPVSGLYIQNPGAFFVYDFVPLDNRVDQSRYPFKLISRYDRRFGVIILQ
                     SCHGLLLCVGLHHYYVYNPTTSLFKKIPFCPIDKGTIRMAYDPTKSPHYKLVYARHRD
                     YNRGLVRNNIRIYTYSSETGIWSDCGDRYWSKSSSEILKHGIYWTNAIHWVEGSNHNK
                     LCLEDLAITSVQAPGENGCNHKLFESRGCLHSVCVCPHFSPDRGELKQLNVYEMSNEH
                     SEWLIKYIVHLDEAKRSFPKFRVHPHKLVSIDVWCIALGEREEDSFMVIDLDGTIMQY
                     KIMSNTLHKLPYSKPFRCYHPDSFQFIASSADV"
     misc_feature    22..126
                     /gene="LOC139904663"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(28..30,37..42,49..54,64..66,70..75,85..93,97..99)
                     /gene="LOC139904663"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    301..>615
                     /gene="LOC139904663"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgcatgcgg tcgaatccaa cgacgacctt ttaatcgaaa tcttgctccg tttaccagtt
       61 atctcacttg tcctattcag atcggtatcc aaacgctggt tatctattat caataaccct
      121 catttcgtca ctctactacg ccaaattatt cctaaatccg aacctgtttc tggtctatat
      181 attcaaaacc ctggagcatt ctttgtgtat gattttgtgc ctttagataa cagagtagat
      241 cagagtagat atccatttaa attaatttcc aggtatgatc gccgcttcgg agttataatt
      301 ctacagtcct gccatgggtt acttttgtgt gtagggttgc atcactatta tgtgtacaat
      361 ccaaccacta gtctgtttaa aaagattcca ttttgtccca ttgataaggg tactataaga
      421 atggcttatg atcctacaaa atcacctcat tacaaattgg tgtatgctag acatagagat
      481 tataatcgtg gtttagtccg taataatatt cgaatttata cttactcttc ggaaacagga
      541 atttggagtg attgtggtga tagatattgg tccaaatcat cttcagaaat tttaaagcat
      601 ggaatatatt ggactaatgc tatacattgg gtcgaaggtt cgaatcataa caagttatgt
      661 ttggaggatt tagctatcac aagtgtacaa gcacccgggg agaacggttg taatcacaag
      721 ttgttcgagt ctcgtggttg tttgcatagt gtttgtgtgt gtcctcattt tagtcctgat
      781 cgtggagagt taaaacagtt gaacgtgtac gagatgagta atgagcattc tgaatggttg
      841 atcaagtaca ttgttcatct tgatgaagcg aagagatcgt ttcctaaatt tagggttcac
      901 cctcataagt tggtttcaat tgatgtttgg tgcattgctt taggcgaaag agaagaggat
      961 tcattcatgg ttattgattt agatggaaca attatgcaat ataaaatcat gtcaaatact
     1021 ctacataagc tcccgtattc caaaccattc cgttgctacc atccggatag ctttcagttc
     1081 attgcatcct ctgcagatgt atga
//
LOCUS       XM_071886596             999 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable magnesium
            transporter NIPA6 (LOC139904664), mRNA.
ACCESSION   XM_071886596
VERSION     XM_071886596.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..999
                     /gene="LOC139904664"
                     /note="probable magnesium transporter NIPA6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139904664"
     CDS             1..999
                     /gene="LOC139904664"
                     /codon_start=1
                     /product="probable magnesium transporter NIPA6"
                     /protein_id="XP_071742697.1"
                     /db_xref="GeneID:139904664"
                     /translation="MRINWELAIQISDQFELLRSRKIDCDVPTFMSWELANQMSDQFE
                     SLRSRNNVKKEFSSQVVTPLGALSIIESNVLAHSLLNVKLRKMGILGSVLCIVGSTII
                     VVHAPSEHSVISVEEIWDLATQPAFLLYTSTAIAVVLVLVLYYEPLYGLTNMMVYIGV
                     CSINGSLTVMSVKAICIAIKLTLEGSSQVARYQAWISVTVAVTCIIIQLNYLNKALNT
                     FNTAVVSPLYYAMFTSFTILASATMFKGWSGQSASTIISIICRFMIVLSGTMILHSTR
                     DPDPSPVSWWSGYPFNIYYIPLVYRLIEEEIVRCDNEIMYMDGDELSHLCMALERP"
     misc_feature    <178..831
                     /gene="LOC139904664"
                     /note="EamA-like transporter family; Region: EamA;
                     cl23754"
                     /db_xref="CDD:474045"
ORIGIN      
        1 atgagaatta actgggaact tgcaattcag atatctgatc agtttgagtt attgagatcc
       61 agaaagattg attgtgatgt tcctactttc atgtcttggg aacttgcaaa tcagatgtct
      121 gatcagtttg agtcattgag atcgagaaat aatgtaaaaa aagaattttc atcacaagtc
      181 gtgactccac ttggtgcatt aagtatcatt gaaagtaatg tcctagcaca ttccttactc
      241 aatgtgaaac tgagaaaaat gggaatactt ggttctgtgc tgtgtatagt tggttcaacc
      301 ataattgtgg ttcatgcacc tagtgaacat agcgtaattt cagttgaaga aatatgggat
      361 ttagcaacac aaccagcgtt tcttttgtat acatctactg caatagctgt ggtattagta
      421 ttggtgttgt actatgaacc cttatatggg ttgactaata tgatggtgta tatcggtgta
      481 tgttcgataa atggttcatt aacggttatg agtgtaaaag ctatatgtat tgctataaaa
      541 cttacattag agggttctag tcaggtggca cgataccaag cgtggatatc tgtaacggta
      601 gcagttacat gtataatcat ccaattgaat tacttaaata aggctttgaa cacgttcaac
      661 accgcagttg tttcaccgct ttattatgcc atgtttacat ctttcacaat tctcgctagt
      721 gcaaccatgt tcaaaggttg gtccggccaa agtgctagca cgattatttc tattatttgc
      781 aggttcatga ttgttctatc tggtaccatg attttgcaca gtacaagaga tcccgatcca
      841 tcacctgttt catggtggag cggatacccc tttaatatat actatattcc cctagtgtac
      901 agactcattg aggaagaaat tgtgagatgt gataatgaga tcatgtatat ggatggtgat
      961 gagttatcac acttgtgcat ggctctagaa agaccttaa
//
LOCUS       XM_071886597            1161 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139904665), mRNA.
ACCESSION   XM_071886597
VERSION     XM_071886597.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1161
                     /gene="LOC139904665"
                     /note="uncharacterized LOC139904665; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904665"
     CDS             1..1161
                     /gene="LOC139904665"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071742698.1"
                     /db_xref="GeneID:139904665"
                     /translation="MHQLPENLQSVQILPIHNVHQNLPTHDVQQNLPTNEESTNLQTP
                     NLEEARPEVPPPNTEEFDFFNYGVENVCKIKKTDHPFESVVASSASEEENDREDQDED
                     ENEEEEEKKDVFWNMPLLLSEHDQETESTSQITTSYRVSDLIKVRQTFLNKDDFVNHL
                     YTKCLEENFQIKPVKSDKSRFTAKCMLPNCEWKCSAYKIRHTDNFIVKKLHDVHTCSR
                     TQIMGNNKHASKKVLGSILMESFKAANRDYNPKDIRDDVGNRFRVSISYNQAWRAKCH
                     AIEMLRGSMDDSFRMLPIYLHNIKIHNPGSMTNVVTDNENRFVMCYMSFGAVIRSFVQ
                     NVRPIIIVDGAHLKAGYLGTNLVAVAMDANNGILPLAYGIGEGETNESQLVV"
     misc_feature    424..621
                     /gene="LOC139904665"
                     /note="MuDR family transposase; Region: DBD_Tnp_Mut;
                     pfam03108"
                     /db_xref="CDD:427142"
ORIGIN      
        1 atgcatcaac tcccagaaaa cttacagtca gtgcaaatcc taccaataca caatgtccat
       61 caaaacctac caacacacga tgtccaacaa aacctaccaa caaacgagga gagcacaaac
      121 cttcagacac ccaatttgga agaagcacga cctgaagtac cacctccaaa cacagaagag
      181 tttgatttct tcaactatgg agttgagaac gtatgtaaaa ttaaaaaaac agatcaccct
      241 tttgaatcag ttgtcgcgtc tagtgcttcg gaggaagaaa atgacagaga agatcaagat
      301 gaagatgaaa atgaagaaga ggaagaaaaa aaggatgtat tctggaatat gccactttta
      361 ttgagtgagc atgaccaaga gactgaatct acgagccaaa taacaaccag ttatagagta
      421 tccgatttga ttaaagttcg acaaactttt ttaaacaagg atgattttgt aaaccatcta
      481 tacacaaaat gtcttgaaga aaacttccaa attaagcctg taaagtctga caaatctcga
      541 ttcactgcta aatgcatgtt gccaaattgt gagtggaaat gtagtgcata caaaatacgc
      601 cacactgaca acttcatcgt aaagaaattg catgacgtac acacatgctc acgtacccaa
      661 attatgggaa ataataaaca tgcttccaaa aaggtgttag gaagtattct gatggaatcg
      721 ttcaaagctg caaatcgaga ctataatcca aaagatatac gtgatgatgt tggcaaccgt
      781 tttcgggtga gcatttctta caatcaagca tggagagcca agtgtcatgc aatagagatg
      841 cttcgtggca gtatggatga ctcgttccga atgcttccca tttatcttca taacattaag
      901 attcataacc caggaagcat gacaaatgtg gtgactgaca atgaaaatag attcgtgatg
      961 tgttacatgt cctttggcgc agttattcga tcatttgtcc aaaatgttcg ccctattatc
     1021 atcgttgatg gtgcacattt gaaagctgga tacttgggta caaatttagt cgctgttgca
     1081 atggatgcca ataacggaat tttgccattg gcttatggaa ttggtgaagg cgagacaaac
     1141 gagtctcagt tagttgttta a
//
LOCUS       XM_071886598            1480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BTB/POZ and TAZ
            domain-containing protein 1-like (LOC139904666), mRNA.
ACCESSION   XM_071886598
VERSION     XM_071886598.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1480
                     /gene="LOC139904666"
                     /note="BTB/POZ and TAZ domain-containing protein 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 20 Proteins"
                     /db_xref="GeneID:139904666"
     CDS             101..1165
                     /gene="LOC139904666"
                     /codon_start=1
                     /product="BTB/POZ and TAZ domain-containing protein
                     1-like"
                     /protein_id="XP_071742699.1"
                     /db_xref="GeneID:139904666"
                     /translation="MCRSPTSPQNLESDHVSSESVEIIYILTSRGSKIPAHGRILAKA
                     SPVLESIIYSPTKHRSSENTIPILGVPCDAVEAFVQFLYTNRCNDEVMERFGIHLLAL
                     AHVYLVPQLKMKCTKALIGRLTIENVVDDLQLARLCDAPDLYLKCMKLISNRFKSVEE
                     TEGWKFLQNNDPFLELEILKFIDETESRRKSTRKHLQEQSLYFQLSEAMDCLEHICME
                     GCTSVGPYDKEPTKKKAPCRKFSICEGLQHSIRHFARCKKRINGGCVRCKRMWQLFKL
                     HSSICEVPDSTCRVPLCRHFKTKGQQMRNEKEEERWELLVRKVVAAKAISSLSLPKRK
                     LEKPPRSFREAINCHVGVAC"
     misc_feature    170..469
                     /gene="LOC139904666"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; Region:
                     BTB_POZ; cl38908"
                     /db_xref="CDD:453885"
     misc_feature    470..>601
                     /gene="LOC139904666"
                     /note="BACK (BTB and C-terminal Kelch) domain; Region:
                     BACK; cd14733"
                     /db_xref="CDD:350515"
     misc_feature    713..970
                     /gene="LOC139904666"
                     /note="TAZ zinc finger; Region: zf-TAZ; pfam02135"
                     /db_xref="CDD:460457"
     polyA_site      1480
                     /gene="LOC139904666"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatcaaaata caaaacgcta ccgtctctct acaaaatcaa cttgaacgaa gttcatatat
       61 attttccggc gagtttaata cataaacatt tccccaaata atgtgtagaa gtccaacatc
      121 acctcaaaat ctcgaatccg atcatgtttc ctcggaatct gttgaaatta tatatatttt
      181 aacatcacgt ggcagtaaaa ttccggcaca cggtcgaatt ctggcgaaag cgtctccggt
      241 gttggaaagt ataatttaca gtccgacgaa gcatcggagc tccgagaaca caattccgat
      301 tctcggtgtt ccgtgtgatg ccgttgaggc gtttgttcaa ttcctgtata cgaacagatg
      361 caacgatgag gtaatggaaa gatttggaat tcatctgttg gcgttggctc atgtttattt
      421 ggtaccacaa ctgaagatga aatgtacaaa ggctttaatc ggacggctga cgatagagaa
      481 cgtggtggat gatctgcaac ttgctagact ctgcgatgca cctgatcttt acctgaaatg
      541 tatgaaactg atttctaaca gatttaagtc tgttgaggaa actgaaggat ggaagtttct
      601 tcaaaataat gatccgtttc ttgaacttga aatcctcaag ttcatcgatg aaactgaatc
      661 gaggagaaag agtactagga agcatttgca agaacaaagt ttatatttcc aattaagtga
      721 agcaatggat tgtttagagc acatttgtat ggaaggttgt acaagtgtag gaccatatga
      781 taaggaacct actaaaaaga aagcaccttg tagaaaattt tctatatgtg aaggccttca
      841 acactcgatt cgacatttcg caagatgtaa aaagagaatc aatggtggat gtgttaggtg
      901 taaacgtatg tggcagttat ttaaactcca ttcgtcgatt tgtgaagtac ccgattcgac
      961 ttgtagagtt ccgttgtgca ggcacttcaa aacaaaaggg caacaaatga gaaacgagaa
     1021 ggaagaagaa agatgggaat tactagtgag aaaagttgta gctgctaaag ctatatcttc
     1081 tttatctttg ccaaaaagga aattagaaaa acctccaaga tcatttagag aagctataaa
     1141 ttgtcatgtt ggtgtagcat gttagaagag ggtttttgaa ccaatgatta gatttttttt
     1201 tttttttttt tttttttttt tagttattgt aatatagtat agtataggag tatatagtat
     1261 tttagattgg tttagtatat tagaaaaaag gtaaaagtag ctatttatgt tgcccttgtg
     1321 tttgtttgtt tgttttgttg gttgtaatgg tgatgagtac gatagtgttt tgtgtgatgg
     1381 tgtggggcga gttaaagttc tttaggaagg agagttttgt cattgagaaa gagattgagc
     1441 tttttcaggc ttttcaattc taaagaacga ttgtaaatta
//
LOCUS       XM_071886599            3092 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cell division cycle protein
            48 homolog (LOC139904667), mRNA.
ACCESSION   XM_071886599
VERSION     XM_071886599.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3092
                     /gene="LOC139904667"
                     /note="cell division cycle protein 48 homolog; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139904667"
     CDS             386..2917
                     /gene="LOC139904667"
                     /codon_start=1
                     /product="cell division cycle protein 48 homolog"
                     /protein_id="XP_071742700.1"
                     /db_xref="GeneID:139904667"
                     /translation="MLMNSTDQTISCSKSYQIHPSVSPPEHQSNRRLNMSNQPESSSS
                     EPKGQPAAKKDFSTAILERKKSPNRLVVDEAVNDDNSVVAMHPNTLEKLQLFRGDTIL
                     LKGKKRRDTVCIALADESCDEPKIRMNKVIRTNLRVRLGDVVSVHQCPDVKYGKRIHV
                     LPLDDTIEGVTGDLFDAFLKPYFLEAYRPVRKGDHFLVRGGMRSVEFKVIETDPEEYC
                     VVAPDTEIFCEGEPIKRDDEDRLDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI
                     GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFE
                     EAEKNAPSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNR
                     PNSIDPALRRFGRFDREIDIGVPDEVGRLEVIRIHTKNMKLSDDVDLEKISKETHGYV
                     GADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFQTALGTSNPSALR
                     ETVVEVPNCSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG
                     KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDS
                     IATQRGSSSGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRL
                     DQLIYIPLPDEDSRHQIFKAAMRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKY
                     AIRENIEKDIEKERKKSENPDSMDEDEDEVAEIKAAHFEESMKYARRSVSDADIRKYQ
                     AFAQTLQQSRGFGSEFRFPDAASGAAAADPFAASSGGADDDDLYS"
     misc_feature    590..2803
                     /gene="LOC139904667"
                     /note="AAA family ATPase, CDC48 subfamily; Region: CDC48;
                     TIGR01243"
                     /db_xref="CDD:273521"
     polyA_site      3092
                     /gene="LOC139904667"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatgatatta ttcttcttca aggcgtcaaa gaccttgctg gtagtgtagg tttaaatatt
       61 gaacaacgag agcactggcc aagtattcat atcaatcatt ccactacacg acgtgtcttt
      121 atacaattat ttactcaaaa acatgatggt gttcatttat gcttaaatat ttttggttgc
      181 aatagatatg caacattttc attgagtaca tgcatccgat gttttttaca tgaaattcgg
      241 gacaatccaa tgttattagg cactcacgct tcaacttatt tgggcttgaa aaatgatctt
      301 ccaaacatcc ttttcaagct atacatagca ggtgaatttg ttgccaaagc acaaaggctt
      361 ttcacctaaa ttgaagctga aggctatgtt aatgaactca actgatcaaa caatatcgtg
      421 tagcaaaagt tatcagattc atccctcagt ctcaccaccg gagcatcaat caaatcgtcg
      481 tctcaatatg agcaatcaac cggaatcttc atcatctgaa ccaaaaggtc aaccggcagc
      541 aaaaaaggac ttttcaacag ctattttaga gcgaaagaaa tcgcctaatc ggcttgtggt
      601 tgatgaagca gtgaacgatg ataattcagt tgttgcaatg catccaaaca ctctggagaa
      661 actgcagttg tttcgtggtg atactatcct gcttaagggg aagaaaagaa gagatacagt
      721 gtgtatcgca cttgctgatg aaagttgtga tgaacccaag atcagaatga ataaggttat
      781 cagaacaaat ttgagggttc gtctgggaga tgttgtatct gtgcaccagt gcccagatgt
      841 gaagtatggg aagcgtatac atgttcttcc tctagatgac acaattgaag gtgtcacagg
      901 ggacttattt gatgcatttc tgaaacccta ctttttggag gcgtatagac ctgtaagaaa
      961 aggagatcat tttcttgtta gaggtgggat gagatctgta gagttcaagg taatcgagac
     1021 cgacccagag gagtattgtg ttgttgctcc agacactgaa atcttttgcg agggtgagcc
     1081 catcaaaagg gatgatgaag acaggttgga tgagattggt tatgatgatg taggcggtgt
     1141 caggaaacaa atggctcaga ttcgtgagtt ggttgaattg ccattaaggc accctcaact
     1201 ttttaaatcc attggagtaa aaccccctaa aggtatttta ctctatggac cccctggttc
     1261 tggaaagaca cttattgcaa gggctgtagc caatgaaacg ggtgcgttct ttttctgcat
     1321 taatggacct gaaattatgt caaaaatggc tggagagagt gaaagcaatc tcaggaaggc
     1381 gtttgaggag gctgaaaaga atgccccgtc gattattttc attgatgaga ttgattccat
     1441 tgcacctaag cgagacaaga ctaatggtga agttgaaagg aggattgttt cacaactatt
     1501 gacactcatg gatgggttaa aatctcgtgc acatgttatt gtaatggggg ccacaaatcg
     1561 ccctaacagc atcgatcctg ctctcagaag gtttggcagg tttgacaggg aaatagacat
     1621 tggcgtgcct gatgaagttg gacgtcttga agttattcgt atccacacca agaacatgaa
     1681 actttccgat gatgttgatt tggagaagat atctaaagaa acacacggtt atgttggggc
     1741 tgacctggct gctctctgta ctgaagctgc acttcaatgc atcagagaaa aaatggacgt
     1801 cattgatttg gaagatgatt ctattgatgc tgagatactg aattcaatgg ctgtctctaa
     1861 tgaacatttt cagacggctc ttggaacaag caacccatct gctttgcgtg agactgttgt
     1921 ggaggttccc aattgcagct gggaggatat tggaggtctt gaaaatgtca agcgtgagct
     1981 gcaagagacc gtccaatacc ccgtggagca tccagaaaaa ttcgagaaat ttggcatgtc
     2041 accttcaaaa ggtgttcttt tctatggtcc acctggatgt ggtaagacac ttttagctaa
     2101 agctattgca aacgagtgtc aagccaactt cattagcatc aaaggacccg aattgcttac
     2161 catgtggttc ggtgagagtg aagccaatgt tcgtgaaatt ttcgacaagg ccagaggttc
     2221 tgcaccgtgt gtcctcttct tcgatgaact tgattctatt gcaactcaga ggggaagtag
     2281 ttctggtgat gcaggtggtg ctgctgatag ggtgcttaat caactgttga ctgaaatgga
     2341 tggaatgtct gctaaaaaga cggtttttat aatcggtgct actaatagac ccgacatcat
     2401 tgatcctgct ctactacgtc ctgggcgtct cgatcagcta atttatatcc cgctaccaga
     2461 tgaggattcc cgccaccaga tttttaaggc ggcaatgagg aagtcccctg tttccaaaga
     2521 cgttgatttg agagctcttg ctaaatatac acaaggcttt agtggggctg atattacaga
     2581 gatatgccaa cgcgcatgca agtatgcaat cagagagaac attgaaaaag acatagagaa
     2641 ggaaagaaag aaaagtgaga atccagactc tatggatgag gatgaagatg aggttgcgga
     2701 gattaaggcg gctcactttg aggaatcaat gaagtatgct cgtagaagtg tgagtgatgc
     2761 cgacattcgg aaataccagg catttgctca gacattgcag cagtctcgag gattcgggtc
     2821 cgaattccgg ttcccggatg ctgcatctgg ggcagctgct gctgatccat tcgctgcgtc
     2881 ttctggcgga gctgatgatg atgacttata cagctagact acataaatta tgttttaagt
     2941 catgataatt cgacgttata tatttctatc tgatatctgt tgttgattga tcgatttctt
     3001 gcaaacattt tgtcatgcat atggtcgaat gtcgaaactt gcaacatttc acgttttgaa
     3061 tcctaagtta tttcagcaga ctactaccat ca
//
LOCUS       XR_011778925             446 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139904668), ncRNA.
ACCESSION   XR_011778925
VERSION     XR_011778925.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..446
                     /gene="LOC139904668"
                     /note="uncharacterized LOC139904668; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139904668"
     ncRNA           1..446
                     /ncRNA_class="lncRNA"
                     /gene="LOC139904668"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139904668"
ORIGIN      
        1 tctttcctct ccattcattt tatcacctcc caaataatac ttcacccttt ttctctcaaa
       61 accctcaaac cttcaatcat catccaaatt cgttcaagaa ggattcgatc aaaacaaatt
      121 gcatatttga actcctcgtg atctcctctt cgtttccata ccgatttcat caattttggg
      181 tcaagactag cattgttctt tgcacacatt tacttgtcga agtactttac tactcgtaca
      241 ctcaaggtcc ttgaacgata catgatacat gcttccgctc attatttgat acttgcattg
      301 gatgtcgagt atatgtgcat ttcatggagc gtcttttgac tttactttaa accatgtcgc
      361 ctagatttca ttcgtattat aacgttgtaa cttaactatt ggttgaacaa ttcttgtaaa
      421 ctttgggaac aatctttatt atgaaa
//
LOCUS       XM_071829418            1709 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable aspartyl
            aminopeptidase (LOC139839365), mRNA.
ACCESSION   XM_071829418
VERSION     XM_071829418.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1709
                     /gene="LOC139839365"
                     /note="probable aspartyl aminopeptidase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139839365"
     CDS             62..1498
                     /gene="LOC139839365"
                     /codon_start=1
                     /product="probable aspartyl aminopeptidase"
                     /protein_id="XP_071685519.1"
                     /db_xref="GeneID:139839365"
                     /translation="MATEGISVAGDLVDFLNASPTAFHAVDEAKRRLKVAGYEQIYEK
                     GDWKLEAGKKYFFTRNYSTIVAFAIGKKYVAGNGFHIVGAHTDSPCLKLKPVSKVSKG
                     GYLEVGVQTYGGGLWHTWFDRDLTIAGRMIIKEGKGDCVTYSHHLVRLEEPIMRIPTL
                     AIHLDRGVNEGFKVNTQTHLAPVLATSVKAELNKPVAENGPDGKPKEGPNTSSIQKHH
                     SLLLQLLAAKAGCEPEDICDFELQACDTQPSIIAGAMKEFVFSGRLDNLCMSLCSLKA
                     LIDTTASEKSLEDESGVRMVALFDHEEVGSNSAQGAGSPVMFDALTRITTYFSSHAQT
                     LEKATQKSFLVSADMAHALHPNYMDKHEENHQPKLHGGLVIKHNANQRYATNAVTAFI
                     FREIAANHNLPVQDFVVRNDMPCGSTIGPILASGTGIRTVDIGAPQLSMHSIREMCAV
                     DDVKHSYEHLKAFYEDFTSLDAKIAVDK"
     misc_feature    86..1456
                     /gene="LOC139839365"
                     /note="M18 peptidase aspartyl aminopeptidase; Region:
                     M18_DAP; cd05658"
                     /db_xref="CDD:349908"
     misc_feature    order(314..316,854..859,965..970,1103..1108,1112..1114,
                     1187..1189,1208..1210,1307..1312,1382..1387)
                     /gene="LOC139839365"
                     /note="active site"
                     /db_xref="CDD:349908"
ORIGIN      
        1 tttacaaaca ctcatacagt cacaaacaca ggaaaacaaa aacaatattc cgatcaaatt
       61 aatggcgacg gaaggaatct cagtcgcagg cgatcttgtc gacttcttaa acgcttctcc
      121 aacagccttc cacgccgtcg atgaagcgaa aaggagatta aaagtagcag ggtatgagca
      181 aatatatgaa aagggagatt ggaaattaga agctggaaag aagtatttct ttacaagaaa
      241 ttattcgact attgttgctt ttgctattgg taaaaaatat gtcgctggca atggattcca
      301 catagtaggt gctcatactg atagtccttg tcttaaattg aagcctgtct caaaggtatc
      361 aaaaggtggt tatttggaag ttggcgttca gacgtatgga ggtggtttgt ggcatacttg
      421 gtttgaccgc gacttaacta ttgctggaag aatgattatt aaagaaggaa aaggcgactg
      481 tgtaacgtac tcacatcatc ttgttagact cgaggaacct ataatgcgaa ttccaaccct
      541 ggcaattcac ctcgacaggg gagttaatga aggatttaag gtgaatacgc aaactcatct
      601 tgctcctgtc ttggcaacct ctgttaaggc cgagctcaat aaaccagttg ctgagaatgg
      661 cccagatggg aaacccaaag aaggcccgaa cacttccagt atccagaagc atcattcact
      721 tcttttgcag cttcttgcag caaaagctgg ctgtgaacca gaagacattt gtgattttga
      781 gttacaagct tgtgacactc aaccgagcat tattgctggt gcaatgaagg agtttgtatt
      841 ctcaggaaga cttgacaatc tttgtatgtc tttatgctct ttaaaggctt taatagacac
      901 cacagcttca gaaaaaagcc ttgaagacga gagtggtgta agaatggtgg cattatttga
      961 tcatgaagag gttgggtcca attcagcaca gggagctgga tctccagtca tgtttgatgc
     1021 cctaacccgc attacaacct acttttcctc tcatgcacag acactagaaa aggcaactca
     1081 gaaaagcttc ctggtgtctg ctgatatggc acatgcctta catccaaatt atatggataa
     1141 acatgaagag aatcatcaac ctaagttaca tggtggcctt gtgattaaac acaatgcaaa
     1201 ccagcgatat gctactaatg ctgttactgc ctttatattc cgggaaatag cagctaacca
     1261 caatcttcct gttcaggact ttgttgttcg aaacgacatg ccatgtggct caacaattgg
     1321 acccattctg gcaagtggaa ctgggattcg gacagttgat attggagctc cacaattgtc
     1381 aatgcacagc atcagagaga tgtgtgcagt cgatgatgtt aagcattcgt acgagcattt
     1441 gaaggcattt tatgaagact tcacttctct tgatgccaag attgcagttg acaagtaggt
     1501 cttcagtgtc atttatagtc aaaaagactt catattatgg cttcacattt tcacaccttc
     1561 tgtttgcttt tgcaattctg taacctttgc tttcaaagtg gtttagactc gtaatgaatc
     1621 attccagttg gtgcaaatga aaatcaatat atctagaaat gtttaaaatc agtgatggca
     1681 taaagcatac agattgtcag acagtatca
//
LOCUS       XM_071829419            2031 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like
            (LOC139839366), transcript variant X1, mRNA.
ACCESSION   XM_071829419
VERSION     XM_071829419.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2031
                     /gene="LOC139839366"
                     /note="phosphatidylinositol/phosphatidylcholine transfer
                     protein SFH8-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 45 Proteins"
                     /db_xref="GeneID:139839366"
     CDS             84..1796
                     /gene="LOC139839366"
                     /codon_start=1
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH8-like isoform X1"
                     /protein_id="XP_071685520.1"
                     /db_xref="GeneID:139839366"
                     /translation="MSDADELSAPHNFLEGTSSYYECNEHNSDFEVSGEEKKCRMGTL
                     KKAASRLRRSLKKKSRRKNNTIPIDDIRDPEEVIAVDNFRQVLLANDLLPEKFDDYYT
                     LLRFLKARNFDIEKSKQMWANMLQWRKSFGIDNIFEDFEFNELKEVLKHYPQGYHGVD
                     REGRPIYIELLGKADPDKVMLVTTLDRYVKYHVQGFEKTTKIRFPACTVAARKHITAG
                     TTILDVQGLGLKNLTRSAIDFITKLQQIDNDYYPETLGRMYIINAGPGFKMLWKAIQS
                     FLDPKTRSKIHVLGHKYKSTLLEVIDAGQLPEFLGGKCNCADQGGCLQSDKGPWQDHN
                     ILHLVYSGKAKCSVQEISTLSREGRTDSEDRSPMIQMKSSEASAVESASENEDIASKG
                     TKCITEPKLAPVSEDYAKDIQVDKVDDQRNKREVSLQEPEINEESLILTARTRARIWF
                     SLMSFLSFATFIFRLFKKTFLSISRPTRGPQSPFRDLSSVRQKLIDLECKVNDLELKS
                     AELPNDKEDLLKTAVCRVDALESELIATKKALHESLMKLDELLAYVDAQKKVKSRQGK
                     KLCC"
     misc_feature    318..455
                     /gene="LOC139839366"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    519..1025
                     /gene="LOC139839366"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p); Region:
                     SEC14; smart00516"
                     /db_xref="CDD:214706"
ORIGIN      
        1 tatattagaa gcgtccagac tttggacagt tggttcaaac gctttgaatt cggtgtttct
       61 gcaacattgg aaaattttcc ggcatgtccg acgctgatga actatcggct cctcataatt
      121 ttttggaggg cacatcaagt tattatgaat gcaatgaaca taactcggat tttgaagtat
      181 ccggagaaga aaaaaagtgt cgaatgggca cgttaaaaaa ggcagcaagt agacttcggc
      241 gctctcttaa gaaaaagagt aggaggaaaa acaatacaat tccaatcgat gatatacgtg
      301 atcccgaaga ggtgattgca gtagacaatt ttcgacaagt gctgttagct aatgacttgc
      361 ttccagaaaa atttgatgat tattatacat tgttgaggtt cttaaaagct aggaactttg
      421 atattgaaaa atcaaaacaa atgtgggcta acatgcttca atggagaaaa tcgtttggga
      481 tcgacaatat ttttgaggat ttcgagttca atgaattaaa agaagttctg aagcattatc
      541 ctcaaggcta tcatggtgtc gatagagaag gaaggcctat ttacatagaa ctattgggga
      601 aagctgatcc tgataaggtt atgttagtga caacgttaga tcgatacgtt aagtatcatg
      661 ttcaggggtt cgagaaaact actaaaatta ggtttccggc ttgtactgtc gctgcacgta
      721 aacatattac tgctggtaca acaattttag acgttcaagg cctgggtttg aagaacctaa
      781 ctaggtctgc tattgacttt atcacgaagt tgcagcagat tgataatgac tactaccctg
      841 agacacttgg cagaatgtat atcataaacg ccggtcctgg gtttaaaatg ctttggaaag
      901 caatccagag ctttcttgat ccaaaaacta gatcaaaaat tcatgttctc ggccacaaat
      961 acaaaagtac cttgcttgaa gtgattgatg caggccagct gccagaattt ttgggtggaa
     1021 agtgtaactg tgcagatcaa gggggttgtc tgcaatctga taaagggcca tggcaagacc
     1081 acaatatact gcatctagtt tatagtggca aagcaaaatg ttcggtccaa gaaatttcaa
     1141 cattaagcag ggaggggaga actgacagtg aagatcgttc tcctatgatt caaatgaaaa
     1201 gcagtgaggc atctgcagta gaatcagctt cagaaaatga agatatagct tctaaaggta
     1261 caaaatgtat taccgaacca aaattggccc ctgtttctga agactatgca aaggatattc
     1321 aagtcgataa agttgacgat caaagaaata aacgagaagt ttctcttcaa gagcccgaaa
     1381 tcaatgaaga atcactaata ttaacggcaa gaactagagc tcgtatctgg ttttcattga
     1441 tgtcgttcct atcctttgca actttcatat ttcgtttatt caaaaaaacg tttctttcga
     1501 taagtagacc aactcgtggg ccccaaagtc cctttcggga tctatcatct gttaggcaaa
     1561 aacttattga tcttgaatgc aaagtcaatg acttggagtt aaaatcggct gagttgccta
     1621 atgataagga ggatttgcta aaaactgctg tttgtcgtgt tgacgcttta gaatctgagc
     1681 taattgctac aaaaaaggcg ttgcatgagt ctctaatgaa actagacgaa cttcttgcat
     1741 acgtagatgc acaaaaaaaa gtgaagtctc ggcaggggaa gaaattgtgc tgctaaaact
     1801 atcaacccgt ggatatcgat caatattatg atatttgttt ggtgcatgcg taaagacttg
     1861 gaactagata cctttgaagt ttgtcatata aacagttaat ggataagatt tttccagttc
     1921 aagttacagt aaatgaatga agcaatatct acaaagaata gacactagac atctgtattc
     1981 atgtgtttct taaggatcat ttatcaactt ccgatgcttt gtaagtaatg a
//
LOCUS       XM_071829421            2028 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like
            (LOC139839366), transcript variant X2, mRNA.
ACCESSION   XM_071829421
VERSION     XM_071829421.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2028
                     /gene="LOC139839366"
                     /note="phosphatidylinositol/phosphatidylcholine transfer
                     protein SFH8-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 45 Proteins"
                     /db_xref="GeneID:139839366"
     CDS             84..1793
                     /gene="LOC139839366"
                     /codon_start=1
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH8-like isoform X2"
                     /protein_id="XP_071685522.1"
                     /db_xref="GeneID:139839366"
                     /translation="MSDADELSAPHNFLEGTSSYYECNEHNSDFEVSGEEKKCRMGTL
                     KKAASRLRRSLKKKSRRKNNTIPIDDIRDPEEVIAVDNFRQVLLANDLLPEKFDDYYT
                     LLRFLKARNFDIEKSKQMWANMLQWRKSFGIDNIFEDFEFNELKEVLKHYPQGYHGVD
                     REGRPIYIELLGKADPDKVMLVTTLDRYVKYHVQGFEKTTKIRFPACTVAARKHITAG
                     TTILDVQGLGLKNLTRSAIDFITKLQQIDNDYYPETLGRMYIINAGPGFKMLWKAIQS
                     FLDPKTRSKIHVLGHKYKSTLLEVIDAGQLPEFLGGKCNCADQGGCLQSDKGPWQDHN
                     ILHLVYSGKAKCSVQEISTLSREGRTDSEDRSPMIQMKSSEASAVESASENEDIASKG
                     TKCITEPKLAPVSEDYAKDIQVDKVDDQRNKREVSLQEPEINEESLILTARTRARIWF
                     SLMSFLSFATFIFRLFKKTFLSISRPTRGPQSPFRDLSSVRQKLIDLECKVNDLELKS
                     AELPNDKEDLLKTAVCRVDALESELIATKKALHESLMKLDELLAYVDAQKKVKSRGKK
                     LCC"
     misc_feature    318..455
                     /gene="LOC139839366"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    519..1025
                     /gene="LOC139839366"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p); Region:
                     SEC14; smart00516"
                     /db_xref="CDD:214706"
ORIGIN      
        1 tatattagaa gcgtccagac tttggacagt tggttcaaac gctttgaatt cggtgtttct
       61 gcaacattgg aaaattttcc ggcatgtccg acgctgatga actatcggct cctcataatt
      121 ttttggaggg cacatcaagt tattatgaat gcaatgaaca taactcggat tttgaagtat
      181 ccggagaaga aaaaaagtgt cgaatgggca cgttaaaaaa ggcagcaagt agacttcggc
      241 gctctcttaa gaaaaagagt aggaggaaaa acaatacaat tccaatcgat gatatacgtg
      301 atcccgaaga ggtgattgca gtagacaatt ttcgacaagt gctgttagct aatgacttgc
      361 ttccagaaaa atttgatgat tattatacat tgttgaggtt cttaaaagct aggaactttg
      421 atattgaaaa atcaaaacaa atgtgggcta acatgcttca atggagaaaa tcgtttggga
      481 tcgacaatat ttttgaggat ttcgagttca atgaattaaa agaagttctg aagcattatc
      541 ctcaaggcta tcatggtgtc gatagagaag gaaggcctat ttacatagaa ctattgggga
      601 aagctgatcc tgataaggtt atgttagtga caacgttaga tcgatacgtt aagtatcatg
      661 ttcaggggtt cgagaaaact actaaaatta ggtttccggc ttgtactgtc gctgcacgta
      721 aacatattac tgctggtaca acaattttag acgttcaagg cctgggtttg aagaacctaa
      781 ctaggtctgc tattgacttt atcacgaagt tgcagcagat tgataatgac tactaccctg
      841 agacacttgg cagaatgtat atcataaacg ccggtcctgg gtttaaaatg ctttggaaag
      901 caatccagag ctttcttgat ccaaaaacta gatcaaaaat tcatgttctc ggccacaaat
      961 acaaaagtac cttgcttgaa gtgattgatg caggccagct gccagaattt ttgggtggaa
     1021 agtgtaactg tgcagatcaa gggggttgtc tgcaatctga taaagggcca tggcaagacc
     1081 acaatatact gcatctagtt tatagtggca aagcaaaatg ttcggtccaa gaaatttcaa
     1141 cattaagcag ggaggggaga actgacagtg aagatcgttc tcctatgatt caaatgaaaa
     1201 gcagtgaggc atctgcagta gaatcagctt cagaaaatga agatatagct tctaaaggta
     1261 caaaatgtat taccgaacca aaattggccc ctgtttctga agactatgca aaggatattc
     1321 aagtcgataa agttgacgat caaagaaata aacgagaagt ttctcttcaa gagcccgaaa
     1381 tcaatgaaga atcactaata ttaacggcaa gaactagagc tcgtatctgg ttttcattga
     1441 tgtcgttcct atcctttgca actttcatat ttcgtttatt caaaaaaacg tttctttcga
     1501 taagtagacc aactcgtggg ccccaaagtc cctttcggga tctatcatct gttaggcaaa
     1561 aacttattga tcttgaatgc aaagtcaatg acttggagtt aaaatcggct gagttgccta
     1621 atgataagga ggatttgcta aaaactgctg tttgtcgtgt tgacgcttta gaatctgagc
     1681 taattgctac aaaaaaggcg ttgcatgagt ctctaatgaa actagacgaa cttcttgcat
     1741 acgtagatgc acaaaaaaaa gtgaagtctc gggggaagaa attgtgctgc taaaactatc
     1801 aacccgtgga tatcgatcaa tattatgata tttgtttggt gcatgcgtaa agacttggaa
     1861 ctagatacct ttgaagtttg tcatataaac agttaatgga taagattttt ccagttcaag
     1921 ttacagtaaa tgaatgaagc aatatctaca aagaatagac actagacatc tgtattcatg
     1981 tgtttcttaa ggatcattta tcaacttccg atgctttgta agtaatga
//
LOCUS       XM_071829422            6059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DDT domain-containing
            protein PTM-like (LOC139839367), transcript variant X1, mRNA.
ACCESSION   XM_071829422
VERSION     XM_071829422.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6059
                     /gene="LOC139839367"
                     /note="DDT domain-containing protein PTM-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139839367"
     CDS             229..5451
                     /gene="LOC139839367"
                     /codon_start=1
                     /product="DDT domain-containing protein PTM-like isoform
                     X1"
                     /protein_id="XP_071685523.1"
                     /db_xref="GeneID:139839367"
                     /translation="MEPEVVKRRGRKRKRKEGEDVDKTAKKTATKMGRVPPRAKAFLG
                     KYVKKEFDGSGEFLGKIVSYESGLYRIEYEDGDCEDLESRELKRFMVEESEMDGAFHR
                     RKKALDEYIRKKNVKDEVEAEVVHTYVAPNKVEKVEKGSREVVIGIGSVKANKVEPVR
                     IDSGVVDNGVELAIVGKDESFVRGGTFEDSGAQAEVDSESSSDLSDYEPNVIEVESPL
                     LPPEPELPRSSGNFGIPEEYVSYLLSVYSFLRSFSVCLFLSPFGLDEFVGALNCSVHN
                     TLLDAIHIALMRALKSHVEILSSEGSELASRCLRSMDWSLLDSLTWPVFVVQYLTTMR
                     YAEGPEWKEFYSNVLEKDYYSLSAGRKLTVLQLLCDDASNSEELRTEIDNRESSEVGP
                     DPDAAPIFPEESISKKGRPFKTSLSINQEAIKDIFASIPRGRGRPPKNPVLKNQEDVK
                     DVSTLDASASKATESYSGADVDEDDGNGDECRLCGMDGTLICCDGCPSSYHSRCIGVL
                     KSFIPEGEWYCPECVINRSGPKITKTTSLRGAEFFGIDSYEQVFLGSCDHLLVIKTSR
                     SLEVNVRYYSPADVKKVLYALTCSAEHKTLYLEICKGILQYWEIPEQFLSVNDSVGID
                     KSFLNNDGEYTTSSTLLANESGDALNVTNAVNVNGVGENCKELGFGQSSLNESATSGT
                     ENGNYNNKSTINSTCDLSNVYMGSKLYIGSSFKPQAYTNVYIHGDFAASAGASLAILS
                     REEKLGSQTTPSSSYKKFMTANYSLQAKAFSLVAKRFYWPNYEKKLVEVSRERCGWCL
                     SCKATISSKKGCLLNAAAANAIKGAAKILGSISQSKNAEGSLASIATYVMFMEESLCG
                     LTVGPFLNRSYRNHWRKQVEEAATLGQIKAYLLELERNIRDIAFTADWIKLVDDVAFE
                     NQAAQSAKSVVVATQKRGPGRRGRKPLIVSPESTDADTNDTSTDVAWWRGGMLAKHIF
                     QKGVLPQMMIKHAARKGGCVNINGVHYVDGLEVPKRSRQFFWRAAVDMSKTASQLALQ
                     VRYLDLHVRWNDLVCPEQPLQDGKGPEAEASAFRNACIVDKKVLGNKITYGVVFENQK
                     HLPSRVLKKVLEIEETIDKPEKNWFLEMHIPLYQIKGYEMQVPGTMMSATDRRGSTLS
                     SMHKKQIKSSGKNIFSFLSHKRDTSGICFCTSCQHDVPFRLAARCSACQGYCHENCAV
                     GSAIQTAGRVEYIITCKRCYVEKAAAPKNEIVGDSPTSPLLLQGQESHSAIVIKGGIQ
                     NGHEKPLEYSNSNHSSTKKYLNKSSHSKITTIGKQNGNNNKHPLEYIDQSSEKKQAVK
                     SSSTKSKKKSGTSKASKLCLGLIWKKRSPNDTGVDFRLNNLLLKNNPNGHLLAPQCQL
                     CSRPYNSDLMYIRCEKCNYWFHADSVELVESKIMELFGFKCARCRRIRIPICPYTDPE
                     ERKKLEAKKAAIAKFYKQKNMVSDSDYDSETNDDQLQDWEPDSTPLYDEQKAVIIHED
                     YPYPYPNPYPMADQFNSQKLDMDFEYGASVGPVSGSAGPVSGPVPVSKKLPVRRHVKS
                     ETEMVGSTANSLAYDPPANYVGPDMNPAAGGSIAPVVQWDVSTTGFEDNMMFDIGDLN
                     YEDMEFEPQTYFSFNELLASDDGVQLDGEDRPPSANLTDNVVNPPAPSIENLNHEQYP
                     MGITFDQQEPMFSVESGLEMVPCKFCFQSDPCPDLFCTSCEIWIHQNCSPWHEDSSWE
                     PETGWKCGNCREWN"
     misc_feature    355..498
                     /gene="LOC139839367"
                     /note="Tudor domain found in Arabidopsis thaliana DDT
                     domain-containing protein PTM (AtPTM), Dirigent protein 17
                     (AtDIR17), and similar proteins; Region: Tudor_AtPTM-like;
                     cd20401"
                     /db_xref="CDD:410472"
     misc_feature    order(379..381,391..393,397..399,445..447,451..453,
                     457..459)
                     /gene="LOC139839367"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:410472"
     misc_feature    937..1107
                     /gene="LOC139839367"
                     /note="DDT domain; Region: DDT; pfam02791"
                     /db_xref="CDD:460696"
     misc_feature    1243..1377
                     /gene="LOC139839367"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; Region: WHIM1;
                     pfam15612"
                     /db_xref="CDD:464774"
     misc_feature    <1351..1794
                     /gene="LOC139839367"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; Region: TNG2;
                     COG5034"
                     /db_xref="CDD:227367"
     misc_feature    1669..1794
                     /gene="LOC139839367"
                     /note="PHD finger 2 found in class II
                     Chromodomain-Helicase-DNA binding (CHD) proteins; Region:
                     PHD2_CHD_II; cd15532"
                     /db_xref="CDD:277007"
     misc_feature    order(1693..1707,1717..1719,1777..1779)
                     /gene="LOC139839367"
                     /note="putative histone H3 binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:277007"
     misc_feature    3730..3837
                     /gene="LOC139839367"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; Region: C1; cl00040"
                     /db_xref="CDD:412127"
     misc_feature    4354..4494
                     /gene="LOC139839367"
                     /note="PHD zinc finger; Region: PHD; smart00249"
                     /db_xref="CDD:214584"
     misc_feature    order(4393..4404,4414..4416,4477..4479)
                     /gene="LOC139839367"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276966"
     misc_feature    5299..5442
                     /gene="LOC139839367"
                     /note="PHD finger superfamily; Region: PHD_SF; cl22851"
                     /db_xref="CDD:473978"
ORIGIN      
        1 gttttcacag gtttattttt ctagggctga atctccatct ccatatcata ccaacacaac
       61 caaaatcaaa tacgtaatac ctatcgttga agcagatgaa accctaggcg agattcattg
      121 gcggctaact tttttatttc ttttcacacc agggttgatc gaattatggt ttgatgaatt
      181 agcctttgaa ttgaattaaa gcgtgtctcg gatctaaatc ggggaggaat ggagcctgag
      241 gttgttaagc gcaggggaag gaagaggaag aggaaggagg gggaagatgt ggataaaact
      301 gcgaagaaaa cggcgacgaa aatgggtagg gttccgccga gggctaaggc gtttttaggg
      361 aagtatgtaa agaaggagtt tgatggaagt ggtgagtttc ttgggaagat tgtttcatat
      421 gaatctggat tgtataggat cgaatacgaa gatggggatt gtgaggattt ggagagtcgt
      481 gaattgaaaa ggtttatggt tgaggagagt gaaatggatg gtgcttttca taggagaaag
      541 aaggctttag atgagtacat aaggaagaag aatgttaagg atgaggttga agctgaggta
      601 gttcacacgt atgttgctcc taataaggtt gaaaaggtag aaaaaggtag tcgtgaggtt
      661 gttattggta ttggttcagt caaagctaat aaagttgaac ccgtgagaat tgatagtggt
      721 gtggtagata atggtgttga attagccatt gtaggtaaag atgaaagctt tgttcgtggt
      781 ggtacatttg aagatagtgg agctcaagct gaggttgata gtgaatcatc gagtgactta
      841 agtgattatg agcctaatgt gattgaggtt gaaagtcctt tgttacctcc agaaccagag
      901 ttgccacgtt cttcgggaaa ttttgggatc cctgaggagt atgtgtcata tctgctttct
      961 gtatatagct tcttgcggtc atttagtgta tgcttgttct taagtccttt cgggcttgat
     1021 gagtttgttg gtgctctcaa ttgttctgtt cataacacac tgttggatgc tattcatatt
     1081 gctcttatgc gtgctttgaa gagtcatgtg gaaatcctat cttcggaagg ttcagagctc
     1141 gcatcaagat gtctgagaag catggattgg agcttgctcg attcattaac ttggccagtg
     1201 tttgtagttc aatatttaac gactatgaga tatgcagaag gacctgaatg gaaagaattt
     1261 tattccaacg ttttggaaaa agactactat tccctatctg caggtagaaa gttaacagtt
     1321 ttacaacttt tgtgcgatga tgcatcaaat tccgaagaac taaggaccga aatagacaat
     1381 cgtgaatcat ctgaagtggg tcccgatcct gatgcagccc ctatcttccc tgaagaaagt
     1441 atatctaaaa aaggtcgtcc ttttaaaacg tctttgtcaa tcaatcaaga agccataaaa
     1501 gatatatttg caagcatccc taggggacga ggtcgtcctc ctaagaatcc cgttttgaag
     1561 aatcaagaag atgtaaaaga cgtttctacc cttgatgcat ctgcttcgaa agctactgaa
     1621 tcatatagtg gtgccgatgt tgatgaggat gatggtaatg gtgatgaatg tcgattatgt
     1681 ggcatggatg gaaccctaat ttgctgcgat gggtgcccgt catcatatca ttccagatgt
     1741 ataggagtat tgaaatcgtt tattcctgaa ggggaatggt attgtccaga gtgtgttatt
     1801 aacagaagtg ggccaaagat aactaagaca acatctttaa gaggagctga atttttcggc
     1861 attgattctt atgagcaagt gtttttggga tcctgtgatc atctactcgt gataaaaaca
     1921 tcgagaagtt tggaagtaaa tgtacgatac tattctccgg ctgatgttaa aaaagtgttg
     1981 tatgcactta cttgttcagc cgaacacaag actttatact tggagatatg caagggtatt
     2041 ttgcaatatt gggaaattcc tgaacagttt ttatctgtaa atgactcggt tggaatagat
     2101 aaatcgttct taaacaatga tggtgagtat acaacttcct ctactttgtt ggctaacgaa
     2161 agtggtgatg cactgaatgt aaccaatgct gtaaatgtta atggggttgg tgaaaattgt
     2221 aaagagttag ggtttggtca atcttctttg aatgaatctg ccacaagcgg tacagaaaat
     2281 ggcaattaca acaataaaag tacaataaac agcacatgtg atttgtcaaa cgtctacatg
     2341 ggttcaaagt tgtacatagg ttcatcattc aaaccacagg catacacaaa tgtgtacatc
     2401 catggtgatt ttgctgcgtc agccggtgct agtttagcta ttctatcgcg cgaagaaaag
     2461 ttgggttctc aaactacacc ttcaagcagt tataagaagt ttatgactgc taattattca
     2521 cttcaagcaa aagctttttc gcttgttgct aaacgttttt actggccaaa ttatgaaaag
     2581 aaacttgttg aagtctcaag ggaaagatgt ggttggtgtc tttcgtgtaa agctacaatt
     2641 agtagcaaaa aagggtgctt gttgaatgca gctgctgcaa atgccattaa aggggctgca
     2701 aagatacttg gctctataag ccagtccaaa aatgcagagg gcagtcttgc atctatcgct
     2761 acttatgtta tgttcatgga agagagttta tgtggtctga cagttgggcc ttttttaaat
     2821 agaagttata gaaatcattg gcgtaaacag gttgaggaag ctgcaacttt gggtcaaata
     2881 aaggcgtact tgcttgaact tgagaggaac attcgagaca ttgcttttac agcagattgg
     2941 attaagcttg tagatgatgt ggcatttgaa aatcaagccg cccaaagtgc taaaagtgtg
     3001 gtagtagcaa ctcaaaaacg tggaccgggt aggcgtggta gaaaaccatt aatagtatca
     3061 cccgaatcca ctgatgctga tacgaatgat acatcaactg acgttgcttg gtggcgaggt
     3121 ggcatgcttg ctaaacacat attccagaaa ggggtattac cacagatgat gattaagcat
     3181 gctgcacgaa aagggggttg tgtaaatata aacggtgtgc attatgttga tggtcttgag
     3241 gttcctaaaa gaagcagaca gtttttctgg cgagctgcag tcgacatgag caagactgca
     3301 tcacaacttg ctcttcaggt cagataccta gaccttcatg tgagatggaa tgatcttgtt
     3361 tgtcccgaac aacctcttca ggacggaaaa ggtccagagg cagaagcgtc tgcttttagg
     3421 aacgcttgca tcgttgataa gaaagttttg ggaaacaaaa tcacttatgg tgttgttttc
     3481 gagaatcaga aacatcttcc ttcgcgtgtt ctaaaaaaag tattggaaat agaggaaaca
     3541 atagataaac cggagaaaaa ctggtttctt gaaatgcata ttcctctata tcagatcaaa
     3601 gggtatgaga tgcaagtacc aggaacgatg atgtcagcaa ctgatagacg cgggagtaca
     3661 ttatcgagca tgcacaaaaa gcagataaag tcttctggga agaacatatt ttcttttctg
     3721 tcacataaga gggatacttc agggatttgc ttttgtactt cgtgccaaca tgatgttcca
     3781 tttaggcttg ctgcaaggtg cagtgcatgt caaggttact gtcacgagaa ttgtgcagtt
     3841 ggttcagcta ttcaaacggc gggacgcgtt gaatatataa tcacttgcaa acgttgttat
     3901 gttgaaaagg ccgccgcacc taaaaatgag attgttggtg attctcccac tagtccactt
     3961 ctcttgcaag ggcaagaaag tcattcagca atagtcataa aaggtggaat acaaaatggt
     4021 catgaaaagc cattagaata ttcaaactca aatcattctt ctactaagaa gtatcttaat
     4081 aaatccagtc attcaaaaat cactacaatc ggaaagcaaa acggtaataa taataagcat
     4141 ccattggaat atatcgatca atcatctgaa aagaagcaag cagttaaaag ttctagtaca
     4201 aaatcaaaaa agaagagtgg tacgagtaaa gccagcaagt tatgtttggg cttgatttgg
     4261 aagaaaagga gcccaaatga tacgggagtt gacttcaggc taaataactt acttttgaaa
     4321 aacaacccga atgggcactt gctagcacct caatgccaac tttgctcgag accgtataac
     4381 tccgatttga tgtatatacg atgcgagaag tgcaattatt ggttccatgc tgattctgtt
     4441 gagttggtgg agtcaaaaat aatggaattg ttcgggttca aatgtgccag gtgtcgcaga
     4501 atacgtatac ctatctgtcc atatacagat cccgaagagc gaaagaaatt ggaggcaaaa
     4561 aaagcagcta ttgcaaagtt ctataagcag aagaatatgg tatcggattc cgattacgac
     4621 tctgaaacca atgacgatca acttcaagat tgggaacctg attccacccc actttatgac
     4681 gaacagaagg ccgtaatcat tcacgaagat tatccttatc cttaccctaa tccttatcca
     4741 atggctgacc aattcaacag tcagaaacta gatatggatt ttgaatatgg cgctagtgtg
     4801 ggtcccgttt ctggatccgc gggtccagtt tctggacccg tgcccgtgtc taagaagcta
     4861 ccggttagga gacatgtaaa gtccgaaacg gaaatggttg ggtctacagc aaacagtctt
     4921 gcttacgacc cccctgcaaa ttatgtggga cccgacatga accctgcagc agggggatca
     4981 atagctcctg ttgtccaatg ggatgtttcg acgactggat tcgaagataa catgatgttt
     5041 gacatcggtg atctaaacta tgaagacatg gaatttgaac cacaaacata tttctctttt
     5101 aatgagttgc ttgcatcaga tgacggtgtc cagctagacg gagaggaccg gcccccatct
     5161 gctaacctga ctgacaatgt tgttaaccca cctgcaccat ctatagagaa tttaaaccat
     5221 gagcaatatc caatgggcat aacttttgat caacaagagc ctatgttttc tgttgaatcc
     5281 ggacttgaaa tggtgccttg taagttttgt tttcaatctg acccgtgccc ggacttgttt
     5341 tgtacgagct gtgaaatttg gattcaccag aattgttcac cgtggcatga ggactcgtct
     5401 tgggagcctg aaaccggatg gaaatgtggc aactgtcgag agtggaacta gtgaaagctt
     5461 catatcttgt aacggcgtat ccgtcttttt acctcacact gcaagcaaaa atcatgtaca
     5521 gagctgctca tggggagagg ggtgaggtgg cggttgagtg gtgttaaagt tgcaggtctt
     5581 caaataagtt tggtgtatgt tgatctagtg atagaagttc ccacatatgt atgactaatt
     5641 agattgcatt acttggagtt gcaaagactt tagttcatat acacttgttt tcccctgtgg
     5701 ttttgtgggg aatcttatac cattttcgag gggtgataga taagctgatg tttttattgc
     5761 ttattgtatt atttggttgg ttggttgttt caatctgcaa gttaaagtgg atattgttca
     5821 tttgattagc tgctggaatc agtaaactga tgtttcgagt ttaagtgttt aggggtaact
     5881 gaatattgac gattttttag gagattcctt aaagatgttc aactttcttt atttcatgtt
     5941 atcctatttt catcatctta tacgttccat atctggcgtt atattattag actggatgtt
     6001 aatgttaata tgtttattag ttaagagttg taacccttga gagcttgaga ataactaat
//
LOCUS       XM_071829423            6056 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DDT domain-containing
            protein PTM-like (LOC139839367), transcript variant X2, mRNA.
ACCESSION   XM_071829423
VERSION     XM_071829423.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6056
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6056
                     /gene="LOC139839367"
                     /note="DDT domain-containing protein PTM-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839367"
     CDS             229..5448
                     /gene="LOC139839367"
                     /codon_start=1
                     /product="DDT domain-containing protein PTM-like isoform
                     X2"
                     /protein_id="XP_071685524.1"
                     /db_xref="GeneID:139839367"
                     /translation="MEPEVVKRRGRKRKRKEGEDVDKTAKKTATKMGRVPPRAKAFLG
                     KYVKKEFDGSGEFLGKIVSYESGLYRIEYEDGDCEDLESRELKRFMVEESEMDGAFHR
                     RKKALDEYIRKKNVKDEVEAEVVHTYVAPNKVEKVEKGSREVVIGIGSVKANKVEPVR
                     IDSGVVDNGVELAIVGKDESFVRGGTFEDSGAQAEVDSESSSDLSDYEPNVIEVESPL
                     LPPEPELPRSSGNFGIPEEYVSYLLSVYSFLRSFSVCLFLSPFGLDEFVGALNCSVHN
                     TLLDAIHIALMRALKSHVEILSSEGSELASRCLSMDWSLLDSLTWPVFVVQYLTTMRY
                     AEGPEWKEFYSNVLEKDYYSLSAGRKLTVLQLLCDDASNSEELRTEIDNRESSEVGPD
                     PDAAPIFPEESISKKGRPFKTSLSINQEAIKDIFASIPRGRGRPPKNPVLKNQEDVKD
                     VSTLDASASKATESYSGADVDEDDGNGDECRLCGMDGTLICCDGCPSSYHSRCIGVLK
                     SFIPEGEWYCPECVINRSGPKITKTTSLRGAEFFGIDSYEQVFLGSCDHLLVIKTSRS
                     LEVNVRYYSPADVKKVLYALTCSAEHKTLYLEICKGILQYWEIPEQFLSVNDSVGIDK
                     SFLNNDGEYTTSSTLLANESGDALNVTNAVNVNGVGENCKELGFGQSSLNESATSGTE
                     NGNYNNKSTINSTCDLSNVYMGSKLYIGSSFKPQAYTNVYIHGDFAASAGASLAILSR
                     EEKLGSQTTPSSSYKKFMTANYSLQAKAFSLVAKRFYWPNYEKKLVEVSRERCGWCLS
                     CKATISSKKGCLLNAAAANAIKGAAKILGSISQSKNAEGSLASIATYVMFMEESLCGL
                     TVGPFLNRSYRNHWRKQVEEAATLGQIKAYLLELERNIRDIAFTADWIKLVDDVAFEN
                     QAAQSAKSVVVATQKRGPGRRGRKPLIVSPESTDADTNDTSTDVAWWRGGMLAKHIFQ
                     KGVLPQMMIKHAARKGGCVNINGVHYVDGLEVPKRSRQFFWRAAVDMSKTASQLALQV
                     RYLDLHVRWNDLVCPEQPLQDGKGPEAEASAFRNACIVDKKVLGNKITYGVVFENQKH
                     LPSRVLKKVLEIEETIDKPEKNWFLEMHIPLYQIKGYEMQVPGTMMSATDRRGSTLSS
                     MHKKQIKSSGKNIFSFLSHKRDTSGICFCTSCQHDVPFRLAARCSACQGYCHENCAVG
                     SAIQTAGRVEYIITCKRCYVEKAAAPKNEIVGDSPTSPLLLQGQESHSAIVIKGGIQN
                     GHEKPLEYSNSNHSSTKKYLNKSSHSKITTIGKQNGNNNKHPLEYIDQSSEKKQAVKS
                     SSTKSKKKSGTSKASKLCLGLIWKKRSPNDTGVDFRLNNLLLKNNPNGHLLAPQCQLC
                     SRPYNSDLMYIRCEKCNYWFHADSVELVESKIMELFGFKCARCRRIRIPICPYTDPEE
                     RKKLEAKKAAIAKFYKQKNMVSDSDYDSETNDDQLQDWEPDSTPLYDEQKAVIIHEDY
                     PYPYPNPYPMADQFNSQKLDMDFEYGASVGPVSGSAGPVSGPVPVSKKLPVRRHVKSE
                     TEMVGSTANSLAYDPPANYVGPDMNPAAGGSIAPVVQWDVSTTGFEDNMMFDIGDLNY
                     EDMEFEPQTYFSFNELLASDDGVQLDGEDRPPSANLTDNVVNPPAPSIENLNHEQYPM
                     GITFDQQEPMFSVESGLEMVPCKFCFQSDPCPDLFCTSCEIWIHQNCSPWHEDSSWEP
                     ETGWKCGNCREWN"
     misc_feature    355..498
                     /gene="LOC139839367"
                     /note="Tudor domain found in Arabidopsis thaliana DDT
                     domain-containing protein PTM (AtPTM), Dirigent protein 17
                     (AtDIR17), and similar proteins; Region: Tudor_AtPTM-like;
                     cd20401"
                     /db_xref="CDD:410472"
     misc_feature    order(379..381,391..393,397..399,445..447,451..453,
                     457..459)
                     /gene="LOC139839367"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:410472"
     misc_feature    937..1107
                     /gene="LOC139839367"
                     /note="DDT domain; Region: DDT; pfam02791"
                     /db_xref="CDD:460696"
     misc_feature    1240..1374
                     /gene="LOC139839367"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; Region: WHIM1;
                     pfam15612"
                     /db_xref="CDD:464774"
     misc_feature    <1348..1791
                     /gene="LOC139839367"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; Region: TNG2;
                     COG5034"
                     /db_xref="CDD:227367"
     misc_feature    1666..1791
                     /gene="LOC139839367"
                     /note="PHD finger 2 found in class II
                     Chromodomain-Helicase-DNA binding (CHD) proteins; Region:
                     PHD2_CHD_II; cd15532"
                     /db_xref="CDD:277007"
     misc_feature    order(1690..1704,1714..1716,1774..1776)
                     /gene="LOC139839367"
                     /note="putative histone H3 binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:277007"
     misc_feature    3727..3834
                     /gene="LOC139839367"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; Region: C1; cl00040"
                     /db_xref="CDD:412127"
     misc_feature    4351..4491
                     /gene="LOC139839367"
                     /note="PHD zinc finger; Region: PHD; smart00249"
                     /db_xref="CDD:214584"
     misc_feature    order(4390..4401,4411..4413,4474..4476)
                     /gene="LOC139839367"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276966"
     misc_feature    5296..5439
                     /gene="LOC139839367"
                     /note="PHD finger superfamily; Region: PHD_SF; cl22851"
                     /db_xref="CDD:473978"
ORIGIN      
        1 gttttcacag gtttattttt ctagggctga atctccatct ccatatcata ccaacacaac
       61 caaaatcaaa tacgtaatac ctatcgttga agcagatgaa accctaggcg agattcattg
      121 gcggctaact tttttatttc ttttcacacc agggttgatc gaattatggt ttgatgaatt
      181 agcctttgaa ttgaattaaa gcgtgtctcg gatctaaatc ggggaggaat ggagcctgag
      241 gttgttaagc gcaggggaag gaagaggaag aggaaggagg gggaagatgt ggataaaact
      301 gcgaagaaaa cggcgacgaa aatgggtagg gttccgccga gggctaaggc gtttttaggg
      361 aagtatgtaa agaaggagtt tgatggaagt ggtgagtttc ttgggaagat tgtttcatat
      421 gaatctggat tgtataggat cgaatacgaa gatggggatt gtgaggattt ggagagtcgt
      481 gaattgaaaa ggtttatggt tgaggagagt gaaatggatg gtgcttttca taggagaaag
      541 aaggctttag atgagtacat aaggaagaag aatgttaagg atgaggttga agctgaggta
      601 gttcacacgt atgttgctcc taataaggtt gaaaaggtag aaaaaggtag tcgtgaggtt
      661 gttattggta ttggttcagt caaagctaat aaagttgaac ccgtgagaat tgatagtggt
      721 gtggtagata atggtgttga attagccatt gtaggtaaag atgaaagctt tgttcgtggt
      781 ggtacatttg aagatagtgg agctcaagct gaggttgata gtgaatcatc gagtgactta
      841 agtgattatg agcctaatgt gattgaggtt gaaagtcctt tgttacctcc agaaccagag
      901 ttgccacgtt cttcgggaaa ttttgggatc cctgaggagt atgtgtcata tctgctttct
      961 gtatatagct tcttgcggtc atttagtgta tgcttgttct taagtccttt cgggcttgat
     1021 gagtttgttg gtgctctcaa ttgttctgtt cataacacac tgttggatgc tattcatatt
     1081 gctcttatgc gtgctttgaa gagtcatgtg gaaatcctat cttcggaagg ttcagagctc
     1141 gcatcaagat gtctgagcat ggattggagc ttgctcgatt cattaacttg gccagtgttt
     1201 gtagttcaat atttaacgac tatgagatat gcagaaggac ctgaatggaa agaattttat
     1261 tccaacgttt tggaaaaaga ctactattcc ctatctgcag gtagaaagtt aacagtttta
     1321 caacttttgt gcgatgatgc atcaaattcc gaagaactaa ggaccgaaat agacaatcgt
     1381 gaatcatctg aagtgggtcc cgatcctgat gcagccccta tcttccctga agaaagtata
     1441 tctaaaaaag gtcgtccttt taaaacgtct ttgtcaatca atcaagaagc cataaaagat
     1501 atatttgcaa gcatccctag gggacgaggt cgtcctccta agaatcccgt tttgaagaat
     1561 caagaagatg taaaagacgt ttctaccctt gatgcatctg cttcgaaagc tactgaatca
     1621 tatagtggtg ccgatgttga tgaggatgat ggtaatggtg atgaatgtcg attatgtggc
     1681 atggatggaa ccctaatttg ctgcgatggg tgcccgtcat catatcattc cagatgtata
     1741 ggagtattga aatcgtttat tcctgaaggg gaatggtatt gtccagagtg tgttattaac
     1801 agaagtgggc caaagataac taagacaaca tctttaagag gagctgaatt tttcggcatt
     1861 gattcttatg agcaagtgtt tttgggatcc tgtgatcatc tactcgtgat aaaaacatcg
     1921 agaagtttgg aagtaaatgt acgatactat tctccggctg atgttaaaaa agtgttgtat
     1981 gcacttactt gttcagccga acacaagact ttatacttgg agatatgcaa gggtattttg
     2041 caatattggg aaattcctga acagttttta tctgtaaatg actcggttgg aatagataaa
     2101 tcgttcttaa acaatgatgg tgagtataca acttcctcta ctttgttggc taacgaaagt
     2161 ggtgatgcac tgaatgtaac caatgctgta aatgttaatg gggttggtga aaattgtaaa
     2221 gagttagggt ttggtcaatc ttctttgaat gaatctgcca caagcggtac agaaaatggc
     2281 aattacaaca ataaaagtac aataaacagc acatgtgatt tgtcaaacgt ctacatgggt
     2341 tcaaagttgt acataggttc atcattcaaa ccacaggcat acacaaatgt gtacatccat
     2401 ggtgattttg ctgcgtcagc cggtgctagt ttagctattc tatcgcgcga agaaaagttg
     2461 ggttctcaaa ctacaccttc aagcagttat aagaagttta tgactgctaa ttattcactt
     2521 caagcaaaag ctttttcgct tgttgctaaa cgtttttact ggccaaatta tgaaaagaaa
     2581 cttgttgaag tctcaaggga aagatgtggt tggtgtcttt cgtgtaaagc tacaattagt
     2641 agcaaaaaag ggtgcttgtt gaatgcagct gctgcaaatg ccattaaagg ggctgcaaag
     2701 atacttggct ctataagcca gtccaaaaat gcagagggca gtcttgcatc tatcgctact
     2761 tatgttatgt tcatggaaga gagtttatgt ggtctgacag ttgggccttt tttaaataga
     2821 agttatagaa atcattggcg taaacaggtt gaggaagctg caactttggg tcaaataaag
     2881 gcgtacttgc ttgaacttga gaggaacatt cgagacattg cttttacagc agattggatt
     2941 aagcttgtag atgatgtggc atttgaaaat caagccgccc aaagtgctaa aagtgtggta
     3001 gtagcaactc aaaaacgtgg accgggtagg cgtggtagaa aaccattaat agtatcaccc
     3061 gaatccactg atgctgatac gaatgataca tcaactgacg ttgcttggtg gcgaggtggc
     3121 atgcttgcta aacacatatt ccagaaaggg gtattaccac agatgatgat taagcatgct
     3181 gcacgaaaag ggggttgtgt aaatataaac ggtgtgcatt atgttgatgg tcttgaggtt
     3241 cctaaaagaa gcagacagtt tttctggcga gctgcagtcg acatgagcaa gactgcatca
     3301 caacttgctc ttcaggtcag atacctagac cttcatgtga gatggaatga tcttgtttgt
     3361 cccgaacaac ctcttcagga cggaaaaggt ccagaggcag aagcgtctgc ttttaggaac
     3421 gcttgcatcg ttgataagaa agttttggga aacaaaatca cttatggtgt tgttttcgag
     3481 aatcagaaac atcttccttc gcgtgttcta aaaaaagtat tggaaataga ggaaacaata
     3541 gataaaccgg agaaaaactg gtttcttgaa atgcatattc ctctatatca gatcaaaggg
     3601 tatgagatgc aagtaccagg aacgatgatg tcagcaactg atagacgcgg gagtacatta
     3661 tcgagcatgc acaaaaagca gataaagtct tctgggaaga acatattttc ttttctgtca
     3721 cataagaggg atacttcagg gatttgcttt tgtacttcgt gccaacatga tgttccattt
     3781 aggcttgctg caaggtgcag tgcatgtcaa ggttactgtc acgagaattg tgcagttggt
     3841 tcagctattc aaacggcggg acgcgttgaa tatataatca cttgcaaacg ttgttatgtt
     3901 gaaaaggccg ccgcacctaa aaatgagatt gttggtgatt ctcccactag tccacttctc
     3961 ttgcaagggc aagaaagtca ttcagcaata gtcataaaag gtggaataca aaatggtcat
     4021 gaaaagccat tagaatattc aaactcaaat cattcttcta ctaagaagta tcttaataaa
     4081 tccagtcatt caaaaatcac tacaatcgga aagcaaaacg gtaataataa taagcatcca
     4141 ttggaatata tcgatcaatc atctgaaaag aagcaagcag ttaaaagttc tagtacaaaa
     4201 tcaaaaaaga agagtggtac gagtaaagcc agcaagttat gtttgggctt gatttggaag
     4261 aaaaggagcc caaatgatac gggagttgac ttcaggctaa ataacttact tttgaaaaac
     4321 aacccgaatg ggcacttgct agcacctcaa tgccaacttt gctcgagacc gtataactcc
     4381 gatttgatgt atatacgatg cgagaagtgc aattattggt tccatgctga ttctgttgag
     4441 ttggtggagt caaaaataat ggaattgttc gggttcaaat gtgccaggtg tcgcagaata
     4501 cgtataccta tctgtccata tacagatccc gaagagcgaa agaaattgga ggcaaaaaaa
     4561 gcagctattg caaagttcta taagcagaag aatatggtat cggattccga ttacgactct
     4621 gaaaccaatg acgatcaact tcaagattgg gaacctgatt ccaccccact ttatgacgaa
     4681 cagaaggccg taatcattca cgaagattat ccttatcctt accctaatcc ttatccaatg
     4741 gctgaccaat tcaacagtca gaaactagat atggattttg aatatggcgc tagtgtgggt
     4801 cccgtttctg gatccgcggg tccagtttct ggacccgtgc ccgtgtctaa gaagctaccg
     4861 gttaggagac atgtaaagtc cgaaacggaa atggttgggt ctacagcaaa cagtcttgct
     4921 tacgaccccc ctgcaaatta tgtgggaccc gacatgaacc ctgcagcagg gggatcaata
     4981 gctcctgttg tccaatggga tgtttcgacg actggattcg aagataacat gatgtttgac
     5041 atcggtgatc taaactatga agacatggaa tttgaaccac aaacatattt ctcttttaat
     5101 gagttgcttg catcagatga cggtgtccag ctagacggag aggaccggcc cccatctgct
     5161 aacctgactg acaatgttgt taacccacct gcaccatcta tagagaattt aaaccatgag
     5221 caatatccaa tgggcataac ttttgatcaa caagagccta tgttttctgt tgaatccgga
     5281 cttgaaatgg tgccttgtaa gttttgtttt caatctgacc cgtgcccgga cttgttttgt
     5341 acgagctgtg aaatttggat tcaccagaat tgttcaccgt ggcatgagga ctcgtcttgg
     5401 gagcctgaaa ccggatggaa atgtggcaac tgtcgagagt ggaactagtg aaagcttcat
     5461 atcttgtaac ggcgtatccg tctttttacc tcacactgca agcaaaaatc atgtacagag
     5521 ctgctcatgg ggagaggggt gaggtggcgg ttgagtggtg ttaaagttgc aggtcttcaa
     5581 ataagtttgg tgtatgttga tctagtgata gaagttccca catatgtatg actaattaga
     5641 ttgcattact tggagttgca aagactttag ttcatataca cttgttttcc cctgtggttt
     5701 tgtggggaat cttataccat tttcgagggg tgatagataa gctgatgttt ttattgctta
     5761 ttgtattatt tggttggttg gttgtttcaa tctgcaagtt aaagtggata ttgttcattt
     5821 gattagctgc tggaatcagt aaactgatgt ttcgagttta agtgtttagg ggtaactgaa
     5881 tattgacgat tttttaggag attccttaaa gatgttcaac tttctttatt tcatgttatc
     5941 ctattttcat catcttatac gttccatatc tggcgttata ttattagact ggatgttaat
     6001 gttaatatgt ttattagtta agagttgtaa cccttgagag cttgagaata actaat
//
LOCUS       XR_011756916            4014 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X1, ncRNA.
ACCESSION   XR_011756916
VERSION     XR_011756916.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4014
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..4014
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 acgagtaaag ccagatgaaa atacatgaat tcatcttctt catccatcca acgagacttc
       61 ttcgatacct aatccatcgc attaatcgcc tccgtcgcct tcagctccta ccgtaccttt
      121 ttgatgaaca ggggaatcag ccgattctca tctattcctc ctacaacagc gattcaaacc
      181 caaaaaatat atgcggactc aatttttgca aggatcaatc atagagaata aaaatcggaa
      241 aaattcattc ccgtcggatc aggtatgtaa ttttcacaaa tcttaatatg ttaaaccgtg
      301 gattatggaa tttgattaag atttgttttt gattttattt gaattccgtt ttcattaaac
      361 cctaattttg tactatatta tcaattatca attattaatt ctatcacttc aatcgtttac
      421 cgtaatatca tggtctctta aaaattaagg ttccagtttg tgggtttcaa ggttgtgaat
      481 cgatattttg caaaaaaaaa ggtatcctgc tttcaatctc atgttacgta attaagatca
      541 ttatgaatga cttaaagatt gctcccattt tcatcatctc attcaactac atatttaacc
      601 ttaatcttct gtaagttatc attggtattt atttatttgt attcatatgc ttataaatga
      661 ctatgtacaa gtataagtat gtataaggtg tagataatga agtttggtaa aaaaaaaata
      721 aaaaaaaaat gtagattggc agggacacct tagccctgtg ttgcatttga caactcatac
      781 cgcccacccc acaaggacta agtatgccgg gtgaaactcc tccccccaat acccaacagt
      841 tggcgcagac cagaattgaa cctgcacccc atatttggta agggtatcca acagtgggcc
      901 cggggatcaa aggaggtggg taccaaccaa gctactgccc agttggttag ataatgaagt
      961 tgaggtgtgg aaattcacaa ctctctgacg atttatctaa ggaaggaatt actgatctaa
     1021 ccttcattgt ctattttcag ttgcagttaa gaaaatgaaa aagtgattgt tttcgaaatg
     1081 ctataaaggt attaaagtgc ttgaaactga tatgttgact cttttatttc ttcgaatgtt
     1141 caaataacaa attaaaggaa atttctatat attcggaagg ggagaggaaa gcgtccttga
     1201 atgaatcttc atgtgatatg tcggattgtc ggacaactga tattatttct ttccatttta
     1261 aattcgggtt caaggcctat ggaaggttaa aaaacagaag tttttagtca gtaggttcaa
     1321 ggcccatgga aggttaaaaa acagaagttt ttagtcagtt ttgttcgtga cagtttacat
     1381 aaagaactga ctttagctgc tcaagaaatt ctgggatgat gttactcgat tcatgacact
     1441 gaggtttttt ttgcttgcta ttttttgtat tctctcatct tatatgtaat gatgatggta
     1501 aagtatctga gttcaaagga agttgtagat acaattatga atagaggtgg ctaattgggc
     1561 ctttgaaata agtttgttgc cataatgggt gatggtcaaa ttgggtttaa gtcaagagat
     1621 agacataaag agtcatcctt gaaaatgcat gatactctta tgttatatga tttggccttg
     1681 ctttgtaata tccattgtta tccttgaaaa aaggtaagtt atactaatat caaagttaat
     1741 catgtctcat tgatgatcgg taagttatac taccaaatac ataaacccta actgcaaatt
     1801 ttttgagatt tactttgatt gtttttttac cgttctttga ttgttttatg tttgattcag
     1861 caggtggtga attattgaat tattggtgaa gttggattga ttattgctta ttattattaa
     1921 aggtaaacta ttttgtctta ttggatgagt ttatatttat gtttctatga aaacattaga
     1981 tgatcaggtg aggtgcttga tatcataaac cttttgggca aacgcttaaa gatcaaagat
     2041 cttgcttgaa gcagaagatg ggatttatag acgaggacaa gactctgaca catgaggcaa
     2101 ataacaaaga agtagttgat ttggacaact ctggaactca aagcttcttg cttgacaatt
     2161 gaaagaacga agagagaagc ttagcgagtg tttagccaag aaaagataca tgctttctat
     2221 tcagtaacct taaggtatgt acactggata atccctttca cacacacata aacacttttc
     2281 aattttcatc tttgatcaac cgccgaataa tagtttataa aaaacactta ctcctcgaaa
     2341 acccagggac actttcatca ctggctcgaa ctatttaacc acttcgatac tttcttcgag
     2401 aaatacataa aacccaggaa agatttgcaa gttgaggatg atttcttgca gtctgacccc
     2461 tccattccca agggaagctg tgatgcatat tttacgtgtt gtacaagtaa ttttggacaa
     2521 ctgcacaaag aagcacttct acagctccta tgaggtacat cttcatatta taagctactt
     2581 atttatgtta tatacggtgt tttttttata tattttgtat tgaaatgctt aagcggctgt
     2641 ctaggaagtg tcacttcacc gttttgttca accggggccg ctaaattggc ttcgatggag
     2701 gttaagtatc ttctaaagta aacatcggat agactgtgta aacaacttag gcggatatga
     2761 atatacccat ctgaagttgt tttaattaat cattgttttt gatttggttg gaatttaaat
     2821 gattcttact ttgaaagtct aactttaaca aagatagcat caaatcaaac tacaattatg
     2881 tgttcatgtt attgaatatg accaaaagtc agataaatga ggaatatgtt acgaattagg
     2941 atttagtttg tgataataaa caaaaaacga aaagtaataa cttcgatagt gcgtacaatt
     3001 cgagaagtaa gtaatctttt gatgcccaat gactcgattt tttttcattt aataaaaaac
     3061 gtaaagctaa tcttttataa atagtaataa tctaacttgc ttatcaagaa actggcaaac
     3121 aagtccttac ctttaaacga aagttatgac aaacatcaac tgtttactta ataataacaa
     3181 actctgaacc accaaaaatg gagtaattac tattcctaat aacagaaata aggaagaatt
     3241 gtagtaattg aattttgaga caaccagatt atatgaatca ttcctgaact acatccaggc
     3301 tttcataagt aggccataat ggtgatatta tacctgtcct aattgtaaac tttgaagtag
     3361 ttgagtggac tttgtggcct ttagctgtca acatctttct tgtcagttgt gattcttgtg
     3421 gcctttttga cactcaccat ggaaaatatt ttatatgaat tatctggaac ttttttctct
     3481 tactttgtat ctgtatgtac aatgtatata tgtatatgta ttatatttta tatcgagttg
     3541 gttgcgtgtg ccttagagaa tgtatctgac ccggtagctc atgagctggg taacaccctt
     3601 cattttgagt tctatgaaac gaacgacaca ttaaaggaaa aaaatttagg gcaagggtta
     3661 cagataatcc atctgccaaa catcaatact cacgaaaagt ctgatcttga acttatgcac
     3721 aagataatca aagagtataa ggtaccagct aagttaagat tctcacttct gacaagattg
     3781 catttttcaa gagctttcag ttcctttgct gcccgacaac agtacacatg tatccgcttg
     3841 tatgtttatt agaatatcta actatatgcg tttatgcatc aaataattaa atattgtaac
     3901 cgaatgctga tgtaacaaat attttgttga tgtgtattgg atcatgtatc tactaaatgt
     3961 tacagcaggt ttgtaagtat aaaatttatc gcggtggtgg ttttatgtat tata
//
LOCUS       XR_011756917            3938 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X2, ncRNA.
ACCESSION   XR_011756917
VERSION     XR_011756917.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3938
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3938
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..3938
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 acgagtaaag ccagatgaaa atacatgaat tcatcttctt catccatcca acgagacttc
       61 ttcgatacct aatccatcgc attaatcgcc tccgtcgcct tcagctccta ccgtaccttt
      121 ttgatgaaca ggggaatcag ccgattctca tctattcctc ctacaacagc gattcaaacc
      181 caaaaaatat atgcggactc aatttttgca aggatcaatc atagagaata aaaatcggaa
      241 aaattcattc ccgtcggatc aggtatgtaa ttttcacaaa tcttaatatg ttaaaccgtg
      301 gattatggaa tttgattaag atttgttttt gattttattt gaattccgtt ttcattaaac
      361 cctaattttg tactatatta tcaattatca attattaatt ctatcacttc aatcgtttac
      421 cgtaatatca tggtctctta aaaattaagg ttccagtttg tgggtttcaa ggttgtgaat
      481 cgatattttg caaaaaaaaa ggtatcctgc tttcaatctc atgttacgta attaagatca
      541 ttatgaatga cttaaagatt gctcccattt tcatcatctc attcaactac atatttaacc
      601 ttaatcttct gtaagttatc attggtattt atttatttgt attcatatgc ttataaatga
      661 ctatgtacaa gtataagtat gtataaggtg tagataatga agtttggtaa aaaaaaaata
      721 aaaaaaaaat gtagattggc agggacacct tagccctgtg ttgcatttga caactcatac
      781 cgcccacccc acaaggacta agtatgccgg gtgaaactcc tccccccaat acccaacagt
      841 tggcgcagac cagaattgaa cctgcacccc atatttggta agggtatcca acagtgggcc
      901 cggggatcaa aggaggtggg taccaaccaa gctactgccc agttggttag ataatgaagt
      961 tgagttgcag ttaagaaaat gaaaaagtga ttgttttcga aatgctataa aggtattaaa
     1021 gtgcttgaaa ctgatatgtt gactctttta tttcttcgaa tgttcaaata acaaattaaa
     1081 ggaaatttct atatattcgg aaggggagag gaaagcgtcc ttgaatgaat cttcatgtga
     1141 tatgtcggat tgtcggacaa ctgatattat ttctttccat tttaaattcg ggttcaaggc
     1201 ctatggaagg ttaaaaaaca gaagttttta gtcagtaggt tcaaggccca tggaaggtta
     1261 aaaaacagaa gtttttagtc agttttgttc gtgacagttt acataaagaa ctgactttag
     1321 ctgctcaaga aattctggga tgatgttact cgattcatga cactgaggtt ttttttgctt
     1381 gctatttttt gtattctctc atcttatatg taatgatgat ggtaaagtat ctgagttcaa
     1441 aggaagttgt agatacaatt atgaatagag gtggctaatt gggcctttga aataagtttg
     1501 ttgccataat gggtgatggt caaattgggt ttaagtcaag agatagacat aaagagtcat
     1561 ccttgaaaat gcatgatact cttatgttat atgatttggc cttgctttgt aatatccatt
     1621 gttatccttg aaaaaaggta agttatacta atatcaaagt taatcatgtc tcattgatga
     1681 tcggtaagtt atactaccaa atacataaac cctaactgca aattttttga gatttacttt
     1741 gattgttttt ttaccgttct ttgattgttt tatgtttgat tcagcaggtg gtgaattatt
     1801 gaattattgg tgaagttgga ttgattattg cttattatta ttaaaggtaa actattttgt
     1861 cttattggat gagtttatat ttatgtttct atgaaaacat tagatgatca ggtgaggtgc
     1921 ttgatatcat aaaccttttg ggcaaacgct taaagatcaa agatcttgct tgaagcagaa
     1981 gatgggattt atagacgagg acaagactct gacacatgag gcaaataaca aagaagtagt
     2041 tgatttggac aactctggaa ctcaaagctt cttgcttgac aattgaaaga acgaagagag
     2101 aagcttagcg agtgtttagc caagaaaaga tacatgcttt ctattcagta accttaaggt
     2161 atgtacactg gataatccct ttcacacaca cataaacact tttcaatttt catctttgat
     2221 caaccgccga ataatagttt ataaaaaaca cttactcctc gaaaacccag ggacactttc
     2281 atcactggct cgaactattt aaccacttcg atactttctt cgagaaatac ataaaaccca
     2341 ggaaagattt gcaagttgag gatgatttct tgcagtctga cccctccatt cccaagggaa
     2401 gctgtgatgc atattttacg tgttgtacaa gtaattttgg acaactgcac aaagaagcac
     2461 ttctacagct cctatgaggt acatcttcat attataagct acttatttat gttatatacg
     2521 gtgttttttt tatatatttt gtattgaaat gcttaagcgg ctgtctagga agtgtcactt
     2581 caccgttttg ttcaaccggg gccgctaaat tggcttcgat ggaggttaag tatcttctaa
     2641 agtaaacatc ggatagactg tgtaaacaac ttaggcggat atgaatatac ccatctgaag
     2701 ttgttttaat taatcattgt ttttgatttg gttggaattt aaatgattct tactttgaaa
     2761 gtctaacttt aacaaagata gcatcaaatc aaactacaat tatgtgttca tgttattgaa
     2821 tatgaccaaa agtcagataa atgaggaata tgttacgaat taggatttag tttgtgataa
     2881 taaacaaaaa acgaaaagta ataacttcga tagtgcgtac aattcgagaa gtaagtaatc
     2941 ttttgatgcc caatgactcg attttttttc atttaataaa aaacgtaaag ctaatctttt
     3001 ataaatagta ataatctaac ttgcttatca agaaactggc aaacaagtcc ttacctttaa
     3061 acgaaagtta tgacaaacat caactgttta cttaataata acaaactctg aaccaccaaa
     3121 aatggagtaa ttactattcc taataacaga aataaggaag aattgtagta attgaatttt
     3181 gagacaacca gattatatga atcattcctg aactacatcc aggctttcat aagtaggcca
     3241 taatggtgat attatacctg tcctaattgt aaactttgaa gtagttgagt ggactttgtg
     3301 gcctttagct gtcaacatct ttcttgtcag ttgtgattct tgtggccttt ttgacactca
     3361 ccatggaaaa tattttatat gaattatctg gaactttttt ctcttacttt gtatctgtat
     3421 gtacaatgta tatatgtata tgtattatat tttatatcga gttggttgcg tgtgccttag
     3481 agaatgtatc tgacccggta gctcatgagc tgggtaacac ccttcatttt gagttctatg
     3541 aaacgaacga cacattaaag gaaaaaaatt tagggcaagg gttacagata atccatctgc
     3601 caaacatcaa tactcacgaa aagtctgatc ttgaacttat gcacaagata atcaaagagt
     3661 ataaggtacc agctaagtta agattctcac ttctgacaag attgcatttt tcaagagctt
     3721 tcagttcctt tgctgcccga caacagtaca catgtatccg cttgtatgtt tattagaata
     3781 tctaactata tgcgtttatg catcaaataa ttaaatattg taaccgaatg ctgatgtaac
     3841 aaatattttg ttgatgtgta ttggatcatg tatctactaa atgttacagc aggtttgtaa
     3901 gtataaaatt tatcgcggtg gtggttttat gtattata
//
LOCUS       XR_011756918            3236 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X3, ncRNA.
ACCESSION   XR_011756918
VERSION     XR_011756918.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3236
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3236
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..3236
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 acgagtaaag ccagatgaaa atacatgaat tcatcttctt catccatcca acgagacttc
       61 ttcgatacct aatccatcgc attaatcgcc tccgtcgcct tcagctccta ccgtaccttt
      121 ttgatgaaca ggggaatcag ccgattctca tctattcctc ctacaacagc gattcaaacc
      181 caaaaaatat atgcggactc aatttttgca aggatcaatc atagagaata aaaatcggaa
      241 aaattcattc ccgtcggatc agttgcagtt aagaaaatga aaaagtgatt gttttcgaaa
      301 tgctataaag gtattaaagt gcttgaaact gatatgttga ctcttttatt tcttcgaatg
      361 ttcaaataac aaattaaagg aaatttctat atattcggaa ggggagagga aagcgtcctt
      421 gaatgaatct tcatgtgata tgtcggattg tcggacaact gatattattt ctttccattt
      481 taaattcggg ttcaaggcct atggaaggtt aaaaaacaga agtttttagt cagtaggttc
      541 aaggcccatg gaaggttaaa aaacagaagt ttttagtcag ttttgttcgt gacagtttac
      601 ataaagaact gactttagct gctcaagaaa ttctgggatg atgttactcg attcatgaca
      661 ctgaggtttt ttttgcttgc tattttttgt attctctcat cttatatgta atgatgatgg
      721 taaagtatct gagttcaaag gaagttgtag atacaattat gaatagaggt ggctaattgg
      781 gcctttgaaa taagtttgtt gccataatgg gtgatggtca aattgggttt aagtcaagag
      841 atagacataa agagtcatcc ttgaaaatgc atgatactct tatgttatat gatttggcct
      901 tgctttgtaa tatccattgt tatccttgaa aaaaggtaag ttatactaat atcaaagtta
      961 atcatgtctc attgatgatc ggtaagttat actaccaaat acataaaccc taactgcaaa
     1021 ttttttgaga tttactttga ttgttttttt accgttcttt gattgtttta tgtttgattc
     1081 agcaggtggt gaattattga attattggtg aagttggatt gattattgct tattattatt
     1141 aaaggtaaac tattttgtct tattggatga gtttatattt atgtttctat gaaaacatta
     1201 gatgatcagg tgaggtgctt gatatcataa accttttggg caaacgctta aagatcaaag
     1261 atcttgcttg aagcagaaga tgggatttat agacgaggac aagactctga cacatgaggc
     1321 aaataacaaa gaagtagttg atttggacaa ctctggaact caaagcttct tgcttgacaa
     1381 ttgaaagaac gaagagagaa gcttagcgag tgtttagcca agaaaagata catgctttct
     1441 attcagtaac cttaaggtat gtacactgga taatcccttt cacacacaca taaacacttt
     1501 tcaattttca tctttgatca accgccgaat aatagtttat aaaaaacact tactcctcga
     1561 aaacccaggg acactttcat cactggctcg aactatttaa ccacttcgat actttcttcg
     1621 agaaatacat aaaacccagg aaagatttgc aagttgagga tgatttcttg cagtctgacc
     1681 cctccattcc caagggaagc tgtgatgcat attttacgtg ttgtacaagt aattttggac
     1741 aactgcacaa agaagcactt ctacagctcc tatgaggtac atcttcatat tataagctac
     1801 ttatttatgt tatatacggt gtttttttta tatattttgt attgaaatgc ttaagcggct
     1861 gtctaggaag tgtcacttca ccgttttgtt caaccggggc cgctaaattg gcttcgatgg
     1921 aggttaagta tcttctaaag taaacatcgg atagactgtg taaacaactt aggcggatat
     1981 gaatataccc atctgaagtt gttttaatta atcattgttt ttgatttggt tggaatttaa
     2041 atgattctta ctttgaaagt ctaactttaa caaagatagc atcaaatcaa actacaatta
     2101 tgtgttcatg ttattgaata tgaccaaaag tcagataaat gaggaatatg ttacgaatta
     2161 ggatttagtt tgtgataata aacaaaaaac gaaaagtaat aacttcgata gtgcgtacaa
     2221 ttcgagaagt aagtaatctt ttgatgccca atgactcgat tttttttcat ttaataaaaa
     2281 acgtaaagct aatcttttat aaatagtaat aatctaactt gcttatcaag aaactggcaa
     2341 acaagtcctt acctttaaac gaaagttatg acaaacatca actgtttact taataataac
     2401 aaactctgaa ccaccaaaaa tggagtaatt actattccta ataacagaaa taaggaagaa
     2461 ttgtagtaat tgaattttga gacaaccaga ttatatgaat cattcctgaa ctacatccag
     2521 gctttcataa gtaggccata atggtgatat tatacctgtc ctaattgtaa actttgaagt
     2581 agttgagtgg actttgtggc ctttagctgt caacatcttt cttgtcagtt gtgattcttg
     2641 tggccttttt gacactcacc atggaaaata ttttatatga attatctgga acttttttct
     2701 cttactttgt atctgtatgt acaatgtata tatgtatatg tattatattt tatatcgagt
     2761 tggttgcgtg tgccttagag aatgtatctg acccggtagc tcatgagctg ggtaacaccc
     2821 ttcattttga gttctatgaa acgaacgaca cattaaagga aaaaaattta gggcaagggt
     2881 tacagataat ccatctgcca aacatcaata ctcacgaaaa gtctgatctt gaacttatgc
     2941 acaagataat caaagagtat aaggtaccag ctaagttaag attctcactt ctgacaagat
     3001 tgcatttttc aagagctttc agttcctttg ctgcccgaca acagtacaca tgtatccgct
     3061 tgtatgttta ttagaatatc taactatatg cgtttatgca tcaaataatt aaatattgta
     3121 accgaatgct gatgtaacaa atattttgtt gatgtgtatt ggatcatgta tctactaaat
     3181 gttacagcag gtttgtaagt ataaaattta tcgcggtggt ggttttatgt attata
//
LOCUS       XR_011756919            3847 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X4, ncRNA.
ACCESSION   XR_011756919
VERSION     XR_011756919.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3847
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3847
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..3847
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 acgagtaaag ccagatgaaa atacatgaat tcatcttctt catccatcca acgagacttc
       61 ttcgatacct aatccatcgc attaatcgcc tccgtcgcct tcagctccta ccgtaccttt
      121 ttgatgaaca ggggaatcag ccgattctca tctattcctc ctacaacagc gattcaaacc
      181 caaaaaatat atgcggactc aatttttgca aggatcaatc atagagaata aaaatcggaa
      241 aaattcattc ccgtcggatc aggtatgtaa ttttcacaaa tcttaatatg ttaaaccgtg
      301 gattatggaa tttgattaag atttgttttt gattttattt gaattccgtt ttcattaaac
      361 cctaattttg tactatatta tcaattatca attattaatt ctatcacttc aatcgtttac
      421 cgtaatatca tggtctctta aaaattaagg ttccagtttg tgggtttcaa ggttgtgaat
      481 cgatattttg caaaaaaaaa ggtatcctgc tttcaatctc atgttacgta attaagatca
      541 ttatgaatga cttaaagatt gctcccattt tcatcatctc attcaactac atatttaacc
      601 ttaatcttct gtaagttatc attggtattt atttatttgt attcatatgc ttataaatga
      661 ctatgtacaa gtataagtat gtataaggtg tagataatga agtttggtaa aaaaaaaata
      721 aaaaaaaaat gtagattggc agggacacct tagccctgtg ttgcatttga caactcatac
      781 cgcccacccc acaaggacta agtatgccgg gtgaaactcc tccccccaat acccaacagt
      841 tggcgcagac cagaattgaa cctgcacccc atatttggta agggtatcca acagtgggcc
      901 cggggatcaa aggaggtggg taccaaccaa gctactgccc agttggttag ataatgaagt
      961 tgagttgcag ttaagaaaat gaaaaagtga ttgttttcga aatgctataa aggggagagg
     1021 aaagcgtcct tgaatgaatc ttcatgtgat atgtcggatt gtcggacaac tgatattatt
     1081 tctttccatt ttaaattcgg gttcaaggcc tatggaaggt taaaaaacag aagtttttag
     1141 tcagtaggtt caaggcccat ggaaggttaa aaaacagaag tttttagtca gttttgttcg
     1201 tgacagttta cataaagaac tgactttagc tgctcaagaa attctgggat gatgttactc
     1261 gattcatgac actgaggttt tttttgcttg ctattttttg tattctctca tcttatatgt
     1321 aatgatgatg gtaaagtatc tgagttcaaa ggaagttgta gatacaatta tgaatagagg
     1381 tggctaattg ggcctttgaa ataagtttgt tgccataatg ggtgatggtc aaattgggtt
     1441 taagtcaaga gatagacata aagagtcatc cttgaaaatg catgatactc ttatgttata
     1501 tgatttggcc ttgctttgta atatccattg ttatccttga aaaaaggtaa gttatactaa
     1561 tatcaaagtt aatcatgtct cattgatgat cggtaagtta tactaccaaa tacataaacc
     1621 ctaactgcaa attttttgag atttactttg attgtttttt taccgttctt tgattgtttt
     1681 atgtttgatt cagcaggtgg tgaattattg aattattggt gaagttggat tgattattgc
     1741 ttattattat taaaggtaaa ctattttgtc ttattggatg agtttatatt tatgtttcta
     1801 tgaaaacatt agatgatcag gtgaggtgct tgatatcata aaccttttgg gcaaacgctt
     1861 aaagatcaaa gatcttgctt gaagcagaag atgggattta tagacgagga caagactctg
     1921 acacatgagg caaataacaa agaagtagtt gatttggaca actctggaac tcaaagcttc
     1981 ttgcttgaca attgaaagaa cgaagagaga agcttagcga gtgtttagcc aagaaaagat
     2041 acatgctttc tattcagtaa ccttaaggta tgtacactgg ataatccctt tcacacacac
     2101 ataaacactt ttcaattttc atctttgatc aaccgccgaa taatagttta taaaaaacac
     2161 ttactcctcg aaaacccagg gacactttca tcactggctc gaactattta accacttcga
     2221 tactttcttc gagaaataca taaaacccag gaaagatttg caagttgagg atgatttctt
     2281 gcagtctgac ccctccattc ccaagggaag ctgtgatgca tattttacgt gttgtacaag
     2341 taattttgga caactgcaca aagaagcact tctacagctc ctatgaggta catcttcata
     2401 ttataagcta cttatttatg ttatatacgg tgtttttttt atatattttg tattgaaatg
     2461 cttaagcggc tgtctaggaa gtgtcacttc accgttttgt tcaaccgggg ccgctaaatt
     2521 ggcttcgatg gaggttaagt atcttctaaa gtaaacatcg gatagactgt gtaaacaact
     2581 taggcggata tgaatatacc catctgaagt tgttttaatt aatcattgtt tttgatttgg
     2641 ttggaattta aatgattctt actttgaaag tctaacttta acaaagatag catcaaatca
     2701 aactacaatt atgtgttcat gttattgaat atgaccaaaa gtcagataaa tgaggaatat
     2761 gttacgaatt aggatttagt ttgtgataat aaacaaaaaa cgaaaagtaa taacttcgat
     2821 agtgcgtaca attcgagaag taagtaatct tttgatgccc aatgactcga ttttttttca
     2881 tttaataaaa aacgtaaagc taatctttta taaatagtaa taatctaact tgcttatcaa
     2941 gaaactggca aacaagtcct tacctttaaa cgaaagttat gacaaacatc aactgtttac
     3001 ttaataataa caaactctga accaccaaaa atggagtaat tactattcct aataacagaa
     3061 ataaggaaga attgtagtaa ttgaattttg agacaaccag attatatgaa tcattcctga
     3121 actacatcca ggctttcata agtaggccat aatggtgata ttatacctgt cctaattgta
     3181 aactttgaag tagttgagtg gactttgtgg cctttagctg tcaacatctt tcttgtcagt
     3241 tgtgattctt gtggcctttt tgacactcac catggaaaat attttatatg aattatctgg
     3301 aacttttttc tcttactttg tatctgtatg tacaatgtat atatgtatat gtattatatt
     3361 ttatatcgag ttggttgcgt gtgccttaga gaatgtatct gacccggtag ctcatgagct
     3421 gggtaacacc cttcattttg agttctatga aacgaacgac acattaaagg aaaaaaattt
     3481 agggcaaggg ttacagataa tccatctgcc aaacatcaat actcacgaaa agtctgatct
     3541 tgaacttatg cacaagataa tcaaagagta taaggtacca gctaagttaa gattctcact
     3601 tctgacaaga ttgcattttt caagagcttt cagttccttt gctgcccgac aacagtacac
     3661 atgtatccgc ttgtatgttt attagaatat ctaactatat gcgtttatgc atcaaataat
     3721 taaatattgt aaccgaatgc tgatgtaaca aatattttgt tgatgtgtat tggatcatgt
     3781 atctactaaa tgttacagca ggtttgtaag tataaaattt atcgcggtgg tggttttatg
     3841 tattata
//
LOCUS       XR_011756920            3594 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X5, ncRNA.
ACCESSION   XR_011756920
VERSION     XR_011756920.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3594
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..3594
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 acgagtaaag ccagatgaaa atacatgaat tcatcttctt catccatcca acgagacttc
       61 ttcgatacct aatccatcgc attaatcgcc tccgtcgcct tcagctccta ccgtaccttt
      121 ttgatgaaca ggggaatcag ccgattctca tctattcctc ctacaacagc gattcaaacc
      181 caaaaaatat atgcggactc aatttttgca aggatcaatc atagagaata aaaatcggaa
      241 aaattcattc ccgtcggatc aggtatgtaa ttttcacaaa tcttaatatg ttaaaccgtg
      301 gattatggaa tttgattaag atttgttttt gattttattt gaattccgtt ttcattaaac
      361 cctaattttg tactatatta tcaattatca attattaatt ctatcacttc aatcgtttac
      421 cgtaatatca tggtctctta aaaattaagg ttccagtttg tgggtttcaa ggttgtgaat
      481 cgatattttg caaaaaaaaa ggtatcctgc tttcaatctc atgttacgta attaagatca
      541 ttatgaatga cttaaagatt gctcccattt tcatcatctc attcaactac atatttaacc
      601 ttaatcttct gtaagttatc attggtattt atttatttgt attcatatgc ttataaatga
      661 ctatgtacaa gtataagtat gtataaggtg tagataatga agtttggtaa aaaaaaaata
      721 aaaaaaaaat gtagattggc agggacacct tagccctgtg ttgcatttga caactcatac
      781 cgcccacccc acaaggacta agtatgccgg gtgaaactcc tccccccaat acccaacagt
      841 tggcgcagac cagaattgaa cctgcacccc atatttggta agggtatcca acagtgggcc
      901 cggggatcaa aggaggtggg taccaaccaa gctactgccc agttggttag ataatgaagt
      961 tgaggtgtgg aaattcacaa ctctctgacg atttatctaa ggaaggaatt actgatctaa
     1021 ccttcattgt ctattttcag ttgcagttaa gaaaatgaaa aagtgattgt tttcgaaatg
     1081 ctataaaggt attaaagtgc ttgaaactga tatgttgact cttttatttc ttcgaatgtt
     1141 caaataacaa attaaaggaa atttctatat attcggaagg ggagaggaaa gcgtccttga
     1201 atgaatcttc atgtgatatg tcggattgtc ggacaactga tattatttct ttccatttta
     1261 aattcgggtt caaggcctat ggaaggttaa aaaacagaag tttttagtca gtaggttcaa
     1321 ggcccatgga aggttaaaaa acagaagttt ttagtcagtt ttgttcgtga cagtttacat
     1381 aaagaactga ctttagctgc tcaagaaatt ctgggatgat gttactcgat tcatgacact
     1441 gaggtggtga attattgaat tattggtgaa gttggattga ttattgctta ttattattaa
     1501 aggtaaacta ttttgtctta ttggatgagt ttatatttat gtttctatga aaacattaga
     1561 tgatcaggtg aggtgcttga tatcataaac cttttgggca aacgcttaaa gatcaaagat
     1621 cttgcttgaa gcagaagatg ggatttatag acgaggacaa gactctgaca catgaggcaa
     1681 ataacaaaga agtagttgat ttggacaact ctggaactca aagcttcttg cttgacaatt
     1741 gaaagaacga agagagaagc ttagcgagtg tttagccaag aaaagataca tgctttctat
     1801 tcagtaacct taaggtatgt acactggata atccctttca cacacacata aacacttttc
     1861 aattttcatc tttgatcaac cgccgaataa tagtttataa aaaacactta ctcctcgaaa
     1921 acccagggac actttcatca ctggctcgaa ctatttaacc acttcgatac tttcttcgag
     1981 aaatacataa aacccaggaa agatttgcaa gttgaggatg atttcttgca gtctgacccc
     2041 tccattccca agggaagctg tgatgcatat tttacgtgtt gtacaagtaa ttttggacaa
     2101 ctgcacaaag aagcacttct acagctccta tgaggtacat cttcatatta taagctactt
     2161 atttatgtta tatacggtgt tttttttata tattttgtat tgaaatgctt aagcggctgt
     2221 ctaggaagtg tcacttcacc gttttgttca accggggccg ctaaattggc ttcgatggag
     2281 gttaagtatc ttctaaagta aacatcggat agactgtgta aacaacttag gcggatatga
     2341 atatacccat ctgaagttgt tttaattaat cattgttttt gatttggttg gaatttaaat
     2401 gattcttact ttgaaagtct aactttaaca aagatagcat caaatcaaac tacaattatg
     2461 tgttcatgtt attgaatatg accaaaagtc agataaatga ggaatatgtt acgaattagg
     2521 atttagtttg tgataataaa caaaaaacga aaagtaataa cttcgatagt gcgtacaatt
     2581 cgagaagtaa gtaatctttt gatgcccaat gactcgattt tttttcattt aataaaaaac
     2641 gtaaagctaa tcttttataa atagtaataa tctaacttgc ttatcaagaa actggcaaac
     2701 aagtccttac ctttaaacga aagttatgac aaacatcaac tgtttactta ataataacaa
     2761 actctgaacc accaaaaatg gagtaattac tattcctaat aacagaaata aggaagaatt
     2821 gtagtaattg aattttgaga caaccagatt atatgaatca ttcctgaact acatccaggc
     2881 tttcataagt aggccataat ggtgatatta tacctgtcct aattgtaaac tttgaagtag
     2941 ttgagtggac tttgtggcct ttagctgtca acatctttct tgtcagttgt gattcttgtg
     3001 gcctttttga cactcaccat ggaaaatatt ttatatgaat tatctggaac ttttttctct
     3061 tactttgtat ctgtatgtac aatgtatata tgtatatgta ttatatttta tatcgagttg
     3121 gttgcgtgtg ccttagagaa tgtatctgac ccggtagctc atgagctggg taacaccctt
     3181 cattttgagt tctatgaaac gaacgacaca ttaaaggaaa aaaatttagg gcaagggtta
     3241 cagataatcc atctgccaaa catcaatact cacgaaaagt ctgatcttga acttatgcac
     3301 aagataatca aagagtataa ggtaccagct aagttaagat tctcacttct gacaagattg
     3361 catttttcaa gagctttcag ttcctttgct gcccgacaac agtacacatg tatccgcttg
     3421 tatgtttatt agaatatcta actatatgcg tttatgcatc aaataattaa atattgtaac
     3481 cgaatgctga tgtaacaaat attttgttga tgtgtattgg atcatgtatc tactaaatgt
     3541 tacagcaggt ttgtaagtat aaaatttatc gcggtggtgg ttttatgtat tata
//
LOCUS       XR_011756921            3145 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X6, ncRNA.
ACCESSION   XR_011756921
VERSION     XR_011756921.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3145
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..3145
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 acgagtaaag ccagatgaaa atacatgaat tcatcttctt catccatcca acgagacttc
       61 ttcgatacct aatccatcgc attaatcgcc tccgtcgcct tcagctccta ccgtaccttt
      121 ttgatgaaca ggggaatcag ccgattctca tctattcctc ctacaacagc gattcaaacc
      181 caaaaaatat atgcggactc aatttttgca aggatcaatc atagagaata aaaatcggaa
      241 aaattcattc ccgtcggatc agttgcagtt aagaaaatga aaaagtgatt gttttcgaaa
      301 tgctataaag gggagaggaa agcgtccttg aatgaatctt catgtgatat gtcggattgt
      361 cggacaactg atattatttc tttccatttt aaattcgggt tcaaggccta tggaaggtta
      421 aaaaacagaa gtttttagtc agtaggttca aggcccatgg aaggttaaaa aacagaagtt
      481 tttagtcagt tttgttcgtg acagtttaca taaagaactg actttagctg ctcaagaaat
      541 tctgggatga tgttactcga ttcatgacac tgaggttttt tttgcttgct attttttgta
      601 ttctctcatc ttatatgtaa tgatgatggt aaagtatctg agttcaaagg aagttgtaga
      661 tacaattatg aatagaggtg gctaattggg cctttgaaat aagtttgttg ccataatggg
      721 tgatggtcaa attgggttta agtcaagaga tagacataaa gagtcatcct tgaaaatgca
      781 tgatactctt atgttatatg atttggcctt gctttgtaat atccattgtt atccttgaaa
      841 aaaggtaagt tatactaata tcaaagttaa tcatgtctca ttgatgatcg gtaagttata
      901 ctaccaaata cataaaccct aactgcaaat tttttgagat ttactttgat tgttttttta
      961 ccgttctttg attgttttat gtttgattca gcaggtggtg aattattgaa ttattggtga
     1021 agttggattg attattgctt attattatta aaggtaaact attttgtctt attggatgag
     1081 tttatattta tgtttctatg aaaacattag atgatcaggt gaggtgcttg atatcataaa
     1141 ccttttgggc aaacgcttaa agatcaaaga tcttgcttga agcagaagat gggatttata
     1201 gacgaggaca agactctgac acatgaggca aataacaaag aagtagttga tttggacaac
     1261 tctggaactc aaagcttctt gcttgacaat tgaaagaacg aagagagaag cttagcgagt
     1321 gtttagccaa gaaaagatac atgctttcta ttcagtaacc ttaaggtatg tacactggat
     1381 aatccctttc acacacacat aaacactttt caattttcat ctttgatcaa ccgccgaata
     1441 atagtttata aaaaacactt actcctcgaa aacccaggga cactttcatc actggctcga
     1501 actatttaac cacttcgata ctttcttcga gaaatacata aaacccagga aagatttgca
     1561 agttgaggat gatttcttgc agtctgaccc ctccattccc aagggaagct gtgatgcata
     1621 ttttacgtgt tgtacaagta attttggaca actgcacaaa gaagcacttc tacagctcct
     1681 atgaggtaca tcttcatatt ataagctact tatttatgtt atatacggtg ttttttttat
     1741 atattttgta ttgaaatgct taagcggctg tctaggaagt gtcacttcac cgttttgttc
     1801 aaccggggcc gctaaattgg cttcgatgga ggttaagtat cttctaaagt aaacatcgga
     1861 tagactgtgt aaacaactta ggcggatatg aatataccca tctgaagttg ttttaattaa
     1921 tcattgtttt tgatttggtt ggaatttaaa tgattcttac tttgaaagtc taactttaac
     1981 aaagatagca tcaaatcaaa ctacaattat gtgttcatgt tattgaatat gaccaaaagt
     2041 cagataaatg aggaatatgt tacgaattag gatttagttt gtgataataa acaaaaaacg
     2101 aaaagtaata acttcgatag tgcgtacaat tcgagaagta agtaatcttt tgatgcccaa
     2161 tgactcgatt ttttttcatt taataaaaaa cgtaaagcta atcttttata aatagtaata
     2221 atctaacttg cttatcaaga aactggcaaa caagtcctta cctttaaacg aaagttatga
     2281 caaacatcaa ctgtttactt aataataaca aactctgaac caccaaaaat ggagtaatta
     2341 ctattcctaa taacagaaat aaggaagaat tgtagtaatt gaattttgag acaaccagat
     2401 tatatgaatc attcctgaac tacatccagg ctttcataag taggccataa tggtgatatt
     2461 atacctgtcc taattgtaaa ctttgaagta gttgagtgga ctttgtggcc tttagctgtc
     2521 aacatctttc ttgtcagttg tgattcttgt ggcctttttg acactcacca tggaaaatat
     2581 tttatatgaa ttatctggaa cttttttctc ttactttgta tctgtatgta caatgtatat
     2641 atgtatatgt attatatttt atatcgagtt ggttgcgtgt gccttagaga atgtatctga
     2701 cccggtagct catgagctgg gtaacaccct tcattttgag ttctatgaaa cgaacgacac
     2761 attaaaggaa aaaaatttag ggcaagggtt acagataatc catctgccaa acatcaatac
     2821 tcacgaaaag tctgatcttg aacttatgca caagataatc aaagagtata aggtaccagc
     2881 taagttaaga ttctcacttc tgacaagatt gcatttttca agagctttca gttcctttgc
     2941 tgcccgacaa cagtacacat gtatccgctt gtatgtttat tagaatatct aactatatgc
     3001 gtttatgcat caaataatta aatattgtaa ccgaatgctg atgtaacaaa tattttgttg
     3061 atgtgtattg gatcatgtat ctactaaatg ttacagcagg tttgtaagta taaaatttat
     3121 cgcggtggtg gttttatgta ttata
//
LOCUS       XR_011756922            3253 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X7, ncRNA.
ACCESSION   XR_011756922
VERSION     XR_011756922.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3253
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..3253
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 tttcttgatt ttagtatctt atatattcct tttgatgatt tgatacaaaa atattgatcc
       61 ataggttaac gtattaaata ttatacacta aatgtatctc tattttcttt ttccattcta
      121 ttttagaaat ttgttagttt catcttgctg actttggtac acatacctta ggcctcacga
      181 ttgattttat ttgctgacgt agtcaaaatt ttgtagttct tttgatcatc tcaattttgt
      241 agtttttgag gtggggtatg tatctgttat catcgatttt gaattgttgc gaccagttaa
      301 atttaaacca ttttgcatct tctcagccgt tttgctttct gcactctcgc cattttcatg
      361 ttatttgtag gttgtgtgaa ggtttaggtg tagcaaccaa taatgttgct gaatatcgag
      421 ctatgattct agggtagaga gttgctctta gcatagggtt tacaagtatt cgagttctag
      481 gcgattttaa acttgtttgc atgcaggttc aaggcctatg gaaggttaaa aaacagaagt
      541 ttttagtcag taggttcaag gcccatggaa ggttaaaaaa cagaagtttt tagtcagttt
      601 tgttcgtgac agtttacata aagaactgac tttagctgct caagaaattc tgggatgatg
      661 ttactcgatt catgacactg aggttttttt tgcttgctat tttttgtatt ctctcatctt
      721 atatgtaatg atgatggtaa agtatctgag ttcaaaggaa gttgtagata caattatgaa
      781 tagaggtggc taattgggcc tttgaaataa gtttgttgcc ataatgggtg atggtcaaat
      841 tgggtttaag tcaagagata gacataaaga gtcatccttg aaaatgcatg atactcttat
      901 gttatatgat ttggccttgc tttgtaatat ccattgttat ccttgaaaaa aggtaagtta
      961 tactaatatc aaagttaatc atgtctcatt gatgatcggt aagttatact accaaataca
     1021 taaaccctaa ctgcaaattt tttgagattt actttgattg tttttttacc gttctttgat
     1081 tgttttatgt ttgattcagc aggtggtgaa ttattgaatt attggtgaag ttggattgat
     1141 tattgcttat tattattaaa ggtaaactat tttgtcttat tggatgagtt tatatttatg
     1201 tttctatgaa aacattagat gatcaggtga ggtgcttgat atcataaacc ttttgggcaa
     1261 acgcttaaag atcaaagatc ttgcttgaag cagaagatgg gatttataga cgaggacaag
     1321 actctgacac atgaggcaaa taacaaagaa gtagttgatt tggacaactc tggaactcaa
     1381 agcttcttgc ttgacaattg aaagaacgaa gagagaagct tagcgagtgt ttagccaaga
     1441 aaagatacat gctttctatt cagtaacctt aaggtatgta cactggataa tccctttcac
     1501 acacacataa acacttttca attttcatct ttgatcaacc gccgaataat agtttataaa
     1561 aaacacttac tcctcgaaaa cccagggaca ctttcatcac tggctcgaac tatttaacca
     1621 cttcgatact ttcttcgaga aatacataaa acccaggaaa gatttgcaag ttgaggatga
     1681 tttcttgcag tctgacccct ccattcccaa gggaagctgt gatgcatatt ttacgtgttg
     1741 tacaagtaat tttggacaac tgcacaaaga agcacttcta cagctcctat gaggtacatc
     1801 ttcatattat aagctactta tttatgttat atacggtgtt ttttttatat attttgtatt
     1861 gaaatgctta agcggctgtc taggaagtgt cacttcaccg ttttgttcaa ccggggccgc
     1921 taaattggct tcgatggagg ttaagtatct tctaaagtaa acatcggata gactgtgtaa
     1981 acaacttagg cggatatgaa tatacccatc tgaagttgtt ttaattaatc attgtttttg
     2041 atttggttgg aatttaaatg attcttactt tgaaagtcta actttaacaa agatagcatc
     2101 aaatcaaact acaattatgt gttcatgtta ttgaatatga ccaaaagtca gataaatgag
     2161 gaatatgtta cgaattagga tttagtttgt gataataaac aaaaaacgaa aagtaataac
     2221 ttcgatagtg cgtacaattc gagaagtaag taatcttttg atgcccaatg actcgatttt
     2281 ttttcattta ataaaaaacg taaagctaat cttttataaa tagtaataat ctaacttgct
     2341 tatcaagaaa ctggcaaaca agtccttacc tttaaacgaa agttatgaca aacatcaact
     2401 gtttacttaa taataacaaa ctctgaacca ccaaaaatgg agtaattact attcctaata
     2461 acagaaataa ggaagaattg tagtaattga attttgagac aaccagatta tatgaatcat
     2521 tcctgaacta catccaggct ttcataagta ggccataatg gtgatattat acctgtccta
     2581 attgtaaact ttgaagtagt tgagtggact ttgtggcctt tagctgtcaa catctttctt
     2641 gtcagttgtg attcttgtgg cctttttgac actcaccatg gaaaatattt tatatgaatt
     2701 atctggaact tttttctctt actttgtatc tgtatgtaca atgtatatat gtatatgtat
     2761 tatattttat atcgagttgg ttgcgtgtgc cttagagaat gtatctgacc cggtagctca
     2821 tgagctgggt aacacccttc attttgagtt ctatgaaacg aacgacacat taaaggaaaa
     2881 aaatttaggg caagggttac agataatcca tctgccaaac atcaatactc acgaaaagtc
     2941 tgatcttgaa cttatgcaca agataatcaa agagtataag gtaccagcta agttaagatt
     3001 ctcacttctg acaagattgc atttttcaag agctttcagt tcctttgctg cccgacaaca
     3061 gtacacatgt atccgcttgt atgtttatta gaatatctaa ctatatgcgt ttatgcatca
     3121 aataattaaa tattgtaacc gaatgctgat gtaacaaata ttttgttgat gtgtattgga
     3181 tcatgtatct actaaatgtt acagcaggtt tgtaagtata aaatttatcg cggtggtggt
     3241 tttatgtatt ata
//
LOCUS       XR_011756923            3012 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X8, ncRNA.
ACCESSION   XR_011756923
VERSION     XR_011756923.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3012
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..3012
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 acgagtaaag ccagatgaaa atacatgaat tcatcttctt catccatcca acgagacttc
       61 ttcgatacct aatccatcgc attaatcgcc tccgtcgcct tcagctccta ccgtaccttt
      121 ttgatgaaca ggggaatcag ccgattctca tctattcctc ctacaacagc gattcaaacc
      181 caaaaaatat atgcggactc aatttttgca aggatcaatc atagagaata aaaatcggaa
      241 aaattcattc ccgtcggatc aggtatgtaa ttttcacaaa tcttaatatg ttaaaccgtg
      301 gattatggaa tttgattaag atttgttttt gattttattt gaattccgtt ttcattaaac
      361 cctaattttg tactatatta tcaattatca attattaatt ctatcacttc aatcgtttac
      421 cgtaatatca tggtctctta aaaattaagg ttccagtttg tgggtttcaa ggttgtgaat
      481 cgatattttg caaaaaaaaa ggtatcctgc tttcaatctc atgttacgta attaagatca
      541 ttatgaatga cttaaagatt gctcccattt tcatcatctc attcaactac atatttaacc
      601 ttaatcttct gtaagttatc attggtattt atttatttgt attcatatgc ttataaatga
      661 ctatgtacaa gtataagtat gtataaggtg tagataatga agtttggtaa aaaaaaaata
      721 aaaaaaaaat gtagattggc agggacacct tagccctgtg ttgcatttga caactcatac
      781 cgcccacccc acaaggacta agtatgccgg gtgaaactcc tccccccaat acccaacagt
      841 tggcgcagac cagaattgaa cctgcacccc atatttggta agggtatcca acagtgggcc
      901 cggggatcaa aggaggtggg taccaaccaa gctactgccc agttggttag ataatgaagt
      961 tgaggtgtgg aaattcacaa ctctctgacg atttatctaa ggaaggaatt actgatctaa
     1021 ccttcattgt ctattttcag ttgcagttaa gaaaatgaaa aagtgattgt tttcgaaatg
     1081 ctataaaggt attaaagtgc ttgaaactga tatgttgact cttttatttc ttcgaatgtt
     1141 caaataacaa attaaaggaa atttctatat attcggaagg ggagaggaaa gcgtccttga
     1201 atgaatcttc atgtgatatg tcggattgtc ggacaactga tattatttct ttccatttta
     1261 aattcgggtt caaggcctat ggaaggttaa aaaacagaag tttttagtca gtaggttcaa
     1321 ggcccatgga aggttaaaaa acagaagttt ttagtcagtt ttgttcgtga cagtttacat
     1381 aaagaactga ctttagctgc tcaagaaatt ctgggatgat gttactcgat tcatgacact
     1441 gaggtttttt ttgcttgcta ttttttgtat tctctcatct tatatgtaat gatgatggta
     1501 aagtatctga gttcaaagga agttgtagat acaattatga atagaggtgg ctaattgggc
     1561 ctttgaaata agtttgttgc cataatgggt gatggtcaaa ttgggtttaa gtcaagagat
     1621 agacataaag agtcatcctt gaaaatgcat gatactctta tgttatatga tttggccttg
     1681 ctttgtaata tccattgtta tccttgaaaa aaggtaagtt atactaatat caaagttaat
     1741 catgtctcat tgatgatcgg taagttatac taccaaatac ataaacccta actgcaaatt
     1801 ttttgagatt tactttgatt gtttttttac cgttctttga ttgttttatg tttgattcag
     1861 caggtggtga attattgaat tattggtgaa gttggattga ttattgctta ttattattaa
     1921 aggtaaacta ttttgtctta ttggatgagt ttatatttat gtttctatga aaacattaga
     1981 tgatcaggtg aggtgcttga tatcataaac cttttgggca aacgcttaaa gatcaaagat
     2041 cttgcttgaa gcagaagatg ggatttatag acgaggacaa gactctgaca catgaggcaa
     2101 ataacaaaga agtagttgat ttggacaact ctggaactca aagcttcttg cttgacaatt
     2161 gaaagaacga agagagaagc ttagcgagtg tttagccaag aaaagataca tgctttctat
     2221 tcagtaacct taaggtatgt acactggata atccctttca cacacacata aacacttttc
     2281 aattttcatc tttgatcaac cgccgaataa tagtttataa aaaacactta ctcctcgaaa
     2341 acccagggac actttcatca ctggctcgaa ctatttaacc acttcgatac tttcttcgag
     2401 aaatacataa aacccaggaa agatttgcaa gttgaggatg atttcttgca gtctgacccc
     2461 tccattccca agggaagctg tgatgcatat tttacgtgtt gtacaagtaa ttttggacaa
     2521 ctgcacaaag aagcacttct acagctccta tgagagaatg tatctgaccc ggtagctcat
     2581 gagctgggta acacccttca ttttgagttc tatgaaacga acgacacatt aaaggaaaaa
     2641 aatttagggc aagggttaca gataatccat ctgccaaaca tcaatactca cgaaaagtct
     2701 gatcttgaac ttatgcacaa gataatcaaa gagtataagg taccagctaa gttaagattc
     2761 tcacttctga caagattgca tttttcaaga gctttcagtt cctttgctgc ccgacaacag
     2821 tacacatgta tccgcttgta tgtttattag aatatctaac tatatgcgtt tatgcatcaa
     2881 ataattaaat attgtaaccg aatgctgatg taacaaatat tttgttgatg tgtattggat
     2941 catgtatcta ctaaatgtta cagcaggttt gtaagtataa aatttatcgc ggtggtggtt
     3001 ttatgtatta ta
//
LOCUS       XR_011756924            3949 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839368), transcript variant X9, ncRNA.
ACCESSION   XR_011756924
VERSION     XR_011756924.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3949
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3949
                     /gene="LOC139839368"
                     /note="uncharacterized LOC139839368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839368"
     ncRNA           1..3949
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839368"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139839368"
ORIGIN      
        1 acgagtaaag ccagatgaaa atacatgaat tcatcttctt catccatcca acgagacttc
       61 ttcgatacct aatccatcgc attaatcgcc tccgtcgcct tcagctccta ccgtaccttt
      121 ttgatgaaca ggggaatcag ccgattctca tctattcctc ctacaacagc gattcaaacc
      181 caaaaaatat atgcggactc aatttttgca aggatcaatc atagagaata aaaatcggaa
      241 aaattcattc ccgtcggatc aggtatgtaa ttttcacaaa tcttaatatg ttaaaccgtg
      301 gattatggaa tttgattaag atttgttttt gattttattt gaattccgtt ttcattaaac
      361 cctaattttg tactatatta tcaattatca attattaatt ctatcacttc aatcgtttac
      421 cgtaatatca tggtctctta aaaattaagg ttccagtttg tgggtttcaa ggttgtgaat
      481 cgatattttg caaaaaaaaa ggtatcctgc tttcaatctc atgttacgta attaagatca
      541 ttatgaatga cttaaagatt gctcccattt tcatcatctc attcaactac atatttaacc
      601 ttaatcttct gtaagttatc attggtattt atttatttgt attcatatgc ttataaatga
      661 ctatgtacaa gtataagtat gtataaggtg tagataatga agtttggtaa aaaaaaaata
      721 aaaaaaaaat gtagattggc agggacacct tagccctgtg ttgcatttga caactcatac
      781 cgcccacccc acaaggacta agtatgccgg gtgaaactcc tccccccaat acccaacagt
      841 tggcgcagac cagaattgaa cctgcacccc atatttggta agggtatcca acagtgggcc
      901 cggggatcaa aggaggtggg taccaaccaa gctactgccc agttggttag ataatgaagt
      961 tgaggtgtgg aaattcacaa ctctctgacg atttatctaa ggaaggaatt actgatctaa
     1021 ccttcattgt ctattttcag ttgcagttaa gaaaatgaaa aagtgattgt tttcgaaatg
     1081 ctataaaggt attaaagtgc ttgaaactga tatgttgact cttttatttc ttcgaatgtt
     1141 caaataacaa attaaaggaa atttctatat attcggaagg ggagaggaaa gcgtccttga
     1201 atgaatcttc atgtgatatg tcggattgtc ggacaactga tattatttct ttccatttta
     1261 aattcgggtt caaggcctat ggaaggttaa aaaacagaag tttttagtca gtaggttcaa
     1321 ggcccatgga aggttaaaaa acagaagttt ttagtcagtt ttgttcgtga cagtttacat
     1381 aaagaactga ctttagctgc tcaagaaatt ctgggatgat gttactcgat tcatgacact
     1441 gaggtttttt ttgcttgcta ttttttgtat tctctcatct tatatgtaat gatgatggta
     1501 aagtatctga gttcaaagga agttgtagat acaattatga atagaggtgg ctaattgggc
     1561 ctttgaaata agtttgttgc cataatgggt gatggtcaaa ttgggtttaa gtcaagagat
     1621 agacataaag agtcatcctt gaaaatgcat gatactctta tgttatatga tttggccttg
     1681 ctttgtaata tccattgtta tccttgaaaa aaggtaagtt atactaatat caaagttaat
     1741 catgtctcat tgatgatcgg taagttatac taccaaatac ataaacccta actgcaaatt
     1801 ttttgagatt tactttgatt gtttttttac cgttctttga ttgttttatg tttgattcag
     1861 caggtggtga attattgaat tattggtgaa gttggattga ttattgctta ttattattaa
     1921 aggtgaggtg cttgatatca taaacctttt gggcaaacgc ttaaagatca aagatcttgc
     1981 ttgaagcaga agatgggatt tatagacgag gacaagactc tgacacatga ggcaaataac
     2041 aaagaagtag ttgatttgga caactctgga actcaaagct tcttgcttga caattgaaag
     2101 aacgaagaga gaagcttagc gagtgtttag ccaagaaaag atacatgctt tctattcagt
     2161 aaccttaagg tatgtacact ggataatccc tttcacacac acataaacac ttttcaattt
     2221 tcatctttga tcaaccgccg aataatagtt tataaaaaac acttactcct cgaaaaccca
     2281 gggacacttt catcactggc tcgaactatt taaccacttc gatactttct tcgagaaata
     2341 cataaaaccc aggaaagatt tgcaagttga ggatgatttc ttgcagtctg acccctccat
     2401 tcccaaggga agctgtgatg catattttac gtgttgtaca agtaattttg gacaactgca
     2461 caaagaagca cttctacagc tcctatgagg tacatcttca tattataagc tacttattta
     2521 tgttatatac ggtgtttttt ttatatattt tgtattgaaa tgcttaagcg gctgtctagg
     2581 aagtgtcact tcaccgtttt gttcaaccgg ggccgctaaa ttggcttcga tggaggttaa
     2641 gtatcttcta aagtaaacat cggatagact gtgtaaacaa cttaggcgga tatgaatata
     2701 cccatctgaa gttgttttaa ttaatcattg tttttgattt ggttggaatt taaatgattc
     2761 ttactttgaa agtctaactt taacaaagat agcatcaaat caaactacaa ttatgtgttc
     2821 atgttattga atatgaccaa aagtcagata aatgaggaat atgttacgaa ttaggattta
     2881 gtttgtgata ataaacaaaa aacgaaaagt aataacttcg atagtgcgta caattcgaga
     2941 agtaagtaat cttttgatgc ccaatgactc gatttttttt catttaataa aaaacgtaaa
     3001 gctaatcttt tataaatagt aataatctaa cttgcttatc aagaaactgg caaacaagtc
     3061 cttaccttta aacgaaagtt atgacaaaca tcaactgttt acttaataat aacaaactct
     3121 gaaccaccaa aaatggagta attactattc ctaataacag aaataaggaa gaattgtagt
     3181 aattgaattt tgagacaacc agattatatg aatcattcct gaactacatc caggctttca
     3241 taagtaggcc ataatggtga tattatacct gtcctaattg taaactttga agtagttgag
     3301 tggactttgt ggcctttagc tgtcaacatc tttcttgtca gttgtgattc ttgtggcctt
     3361 tttgacactc accatggaaa atattttata tgaattatct ggaacttttt tctcttactt
     3421 tgtatctgta tgtacaatgt atatatgtat atgtattata ttttatatcg agttggttgc
     3481 gtgtgcctta gagaatgtat ctgacccggt agctcatgag ctgggtaaca cccttcattt
     3541 tgagttctat gaaacgaacg acacattaaa ggaaaaaaat ttagggcaag ggttacagat
     3601 aatccatctg ccaaacatca atactcacga aaagtctgat cttgaactta tgcacaagat
     3661 aatcaaagag tataaggtac cagctaagtt aagattctca cttctgacaa gattgcattt
     3721 ttcaagagct ttcagttcct ttgctgcccg acaacagtac acatgtatcc gcttgtatgt
     3781 ttattagaat atctaactat atgcgtttat gcatcaaata attaaatatt gtaaccgaat
     3841 gctgatgtaa caaatatttt gttgatgtgt attggatcat gtatctacta aatgttacag
     3901 caggtttgta agtataaaat ttatcgcggt ggtggtttta tgtattata
//
LOCUS       XM_071829424             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839369), mRNA.
ACCESSION   XM_071829424
VERSION     XM_071829424.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139839369"
                     /note="uncharacterized LOC139839369; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839369"
     CDS             1..750
                     /gene="LOC139839369"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685525.1"
                     /db_xref="GeneID:139839369"
                     /translation="MDISEFDIHNVKAEKANAMLRYRRFRTITKFFRCVEVSLALILI
                     SWMSTRLPFVIRISGEYFRLLVSVIVSPLFIFLISNVIVVTLLVKSGQITGNISDVRN
                     SGTDMYEEIVNNVTEGIPPVIKPDEIVYQDKEIVLETNSCTKLMNDREFKVTKKPLAN
                     TVLDMDLKVYRRSQSENLMKRETEKVSGKLKRSETEVRRRKDDDTKAGDNAVDYLSNE
                     EFQRKIEGFIAKQVRFHQEEKLAIVVPHNIM"
ORIGIN      
        1 atggatatat ctgagtttga tattcataac gtgaaagcag agaaagcgaa tgcgatgtta
       61 cgataccggc gatttagaac aatcacaaaa tttttccgtt gcgttgaagt ttctctagct
      121 ttgattttaa tctcgtggat gtctactcgt ttgccgtttg ttatcagaat ctccggcgag
      181 tattttcggc tactagtttc tgttatcgtt agtcctctgt ttatttttct aatcagtaac
      241 gtgattgtag taactctgct agtcaaatcc ggtcaaatca ctggaaatat cagtgacgta
      301 agaaattccg gtactgatat gtatgaagag attgtgaata acgttactga aggcattcct
      361 cctgttatca aaccggatga gattgtgtat caggataagg aaattgtatt ggaaactaac
      421 agttgcacta aattgatgaa tgatcgggag tttaaagtta cgaagaaacc attagctaat
      481 acggttttgg atatggatct gaaagtgtat cggagaagtc agtcggagaa tttgatgaag
      541 agagagacgg aaaaggtgtc cggcaagcta aaacggtcgg agacggaggt cagaaggcgg
      601 aaggatgatg atactaaggc aggagacaac gccgttgatt atttaagtaa tgaagagttt
      661 cagaggaaaa ttgaaggatt tattgcaaaa caagttaggt ttcatcaaga ggagaaatta
      721 gcaattgttg ttcctcacaa tataatgtga
//
LOCUS       XR_011756925             444 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839370), ncRNA.
ACCESSION   XR_011756925
VERSION     XR_011756925.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..444
                     /gene="LOC139839370"
                     /note="uncharacterized LOC139839370; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839370"
     ncRNA           1..444
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839370"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839370"
ORIGIN      
        1 tagttcccaa attgttttta ccaggtctag aaccctaatt cgaaaattac gattatggtt
       61 aattgttggt atggtagaaa agcggttctt cgcacatcaa ctactcagag aaacccagga
      121 agaagatttt acgcttgccc aattccgtgg tccaaatgtc agtttgtaca atggtatgac
      181 ccaccagtga tggatcgaga agagttattg gagatgaatg aaatgcttga attgaaactc
      241 aagatggagg aaaggaaaag aagatggatc cagtttcttt tgatattgtt atgttttgtc
      301 attgtttatt ccaaattttc ttattagtta gattgtagct cgatccagtt tctttcgatc
      361 cagtttcttt tgaaagtaat gtaatttgga atttcatatt gaatgtaccc tgcagttcga
      421 ttataaatga atttttctta ttga
//
LOCUS       XM_071829425            2425 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase 3-like
            (LOC139839371), mRNA.
ACCESSION   XM_071829425
VERSION     XM_071829425.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2425
                     /gene="LOC139839371"
                     /note="beta-galactosidase 3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839371"
     CDS             123..2036
                     /gene="LOC139839371"
                     /codon_start=1
                     /product="beta-galactosidase 3-like"
                     /protein_id="XP_071685526.1"
                     /db_xref="GeneID:139839371"
                     /translation="MAVELNTGVPWSMCKEEDAPDPVINTCNGFYCDTFTPNKPYKPT
                     MWTEAWSGWFTEFGAPIEQRPVPDLAFAVARFVQKGGSFFNYYMYHGGTNFGRTSGGP
                     FITTSYDYDAPIDEYGLIREPKYGHLTELHRAIKLCEPAFFSSDATYISLGQRQNAYI
                     YKGNGHCAAFLSNFETNTAVRVVFNNQHYKLPPWSISILPDCKNVVFNTAKVVTQTSR
                     MQMVPTGSILQSWKSYHEDVSLLTNGGQSLSAVGLLEQISITRDTSDYLWYSTSIEIN
                     PLERFLHGGRRPILTVHSKGHGVHVFVNGKRFGSAYGSREDTRFTFIAPVDLRGGTNK
                     IALLSMSAGLPNVGTHFELRDTGILGPVLLDGLNHGTVDLSRSTWTYKVGLNGEMVNL
                     HSPNGISSVEWSRVSLLNRFRQPLKWYKAYFDAPQGNEPLALDMKSMVRGQVWVNGQS
                     IGRYWTVHANGTCGVCKYNGAFRPGKCHAGCGKPTQRWYHVPRSWLKPTRNLLVVFEE
                     VGGNVSDINLVKRTQAHVCASTFEHHPMIENFQTESTGETTMLHDTKVHLRCGLGQSI
                     SAIKFASFGTPFGACGSFQHGTCHAPNSAELIEKTCVGKESCEVMASNAYFATDPCPK
                     VLKRLLVEAVCSG"
     misc_feature    <123..2030
                     /gene="LOC139839371"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
ORIGIN      
        1 ctgaaaagtt gtttgaatca caaggtggtc cgatcatcct ctcgcagatt gaaaacgagt
       61 atggtgcacg acggaggtca cttggaccag caggaaaagc gtatgtaaat tgggctgcga
      121 aaatggcagt tgagctgaat accggagtcc catggtctat gtgcaaggaa gaagatgcac
      181 ctgaccctgt gataaacaca tgcaatggtt tctactgtga cacttttact ccaaacaaac
      241 cttacaagcc aacaatgtgg accgaagctt ggagtggctg gtttacggaa tttggagccc
      301 caattgagca gcggcccgtt cctgatttgg catttgctgt agctcgtttt gtacagaaag
      361 gtggctcgtt ttttaattac tacatgtatc atgggggcac aaacttcgga cgcactagtg
      421 gaggaccttt tatcaccacg agctacgatt atgatgcacc tatagatgaa tatggcttga
      481 ttagagaacc taaatatggt catcttacag agcttcatag ggctattaag ttatgtgaac
      541 cggctttttt ctcatcggat gcaacatata tttctttagg gcagaggcaa aatgcataca
      601 tatataaagg aaatggacat tgtgctgcat ttctatcgaa tttcgaaaca aacactgctg
      661 taagagttgt gttcaacaat cagcattata aattgccacc ttggtccatt agtatcctac
      721 ccgactgcaa aaacgtcgtg ttcaatacag caaaggttgt aactcaaact tcacggatgc
      781 aaatggtgcc aacgggttct attttacagt catggaagag ttatcatgaa gatgtatctc
      841 tgttaacgaa cggtgggcaa tcgttgagtg ctgttggact tttggagcag attagtatca
      901 ctagagatac aagtgattat ttatggtact cgactagtat cgaaattaat ccattggaga
      961 gatttcttca tggagggaga agaccaattc tcacagttca ttctaaagga catggagttc
     1021 atgtttttgt taatggaaaa cgttttgggt ctgcatacgg gtcgcgggag gacactagat
     1081 ttacatttat tgcaccagtt gatctccgag gtggaacaaa taaaattgcg ttgcttagta
     1141 tgtctgccgg actaccaaat gtcggaacac acttcgagtt aagagataca gggatcctag
     1201 gacctgtttt gcttgatgga cttaaccatg gaacagttga cttatcgagg tcaacatgga
     1261 cctataaggt ggggttgaat ggggaaatgg taaatctaca ttcgccaaat ggcatctcat
     1321 ctgttgagtg gagtcgtgtt tcattactca accgtttcag gcaaccattg aaatggtaca
     1381 aggcttattt tgatgcaccg caaggtaacg agcctctggc tttagatatg aaaagtatgg
     1441 tcaggggtca agtatgggtc aatggtcaaa gcattggaag atattggaca gtccatgcga
     1501 acggaacgtg tggagtttgc aagtataatg gggctttccg gcctgggaaa tgtcatgcag
     1561 gctgcggcaa accaactcaa cgatggtatc atgttcccag atcctggtta aagccgaccc
     1621 ggaatctatt ggtggtattt gaagaagttg gtgggaacgt ttcggatata aatttggtga
     1681 aaagaacaca agcccatgtt tgtgcttcaa cttttgaaca ccacccgatg attgaaaatt
     1741 ttcaaactga gagcacgggt gaaacgacaa tgcttcacga cactaaggtt cacctgcgtt
     1801 gtggacttgg ccaatccata tccgcaatta agtttgcaag ttttggaact cctttcggtg
     1861 cttgtggaag ttttcaacat ggcacttgtc acgcgccaaa ctccgccgag ctcatagaga
     1921 agacatgtgt agggaaggag agctgtgagg ttatggcttc aaatgcttac tttgcaacgg
     1981 atccatgtcc gaaagtcttg aagaggttat tagtggaagc agtttgttcg ggctaaccaa
     2041 actaggaaga tgtagatgac agcagttaaa gaactaggaa ctatttagcg aaactgcaac
     2101 tactcgtgag cttgaagaaa tcaagattta cgagttacaa ctacgtacct agtcgatagc
     2161 atgtcattct caaatccgga tatttgagat tcaaggagaa agcaataaga agaaaatagg
     2221 cagatgaata aagtggtttt tgtgtatgcc acacaaaatt gatatcttgg ttctagatgt
     2281 tttttaagat ttaggtatag ataggagtta gatccgaaag attggtctta gttaagaaca
     2341 caccaaaatt atgtatgtta tgaacaggga aagtgacaaa tattatgata accggtatgt
     2401 tacctctatg atttgaattt ggcat
//
LOCUS       XM_071829426            2629 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase 5-like
            (LOC139839372), mRNA.
ACCESSION   XM_071829426
VERSION     XM_071829426.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2629
                     /gene="LOC139839372"
                     /note="beta-galactosidase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 98
                     Proteins"
                     /db_xref="GeneID:139839372"
     CDS             1..2517
                     /gene="LOC139839372"
                     /codon_start=1
                     /product="beta-galactosidase 5-like"
                     /protein_id="XP_071685527.1"
                     /db_xref="GeneID:139839372"
                     /translation="MVVIIKLLSLCIIVTCLQVIHCSVTYDHKSLIINGQRKILISGS
                     IHYPRSNPEMWGDLMIKAKTGGLDVIDTYVFWNVHEPSPGIYDFSGRYDIVRFVKTAA
                     RHGLYVNLRMGPYVCAEWNYGGFPVWLKYVPGISFRTDNEPFKAAMQGFIRKIVEMMK
                     AEKLYEPQGGPIILSQIENEYGFKRKSFGPAEKAYINWAAKMAVELNTGVPWSMSKEE
                     TAPDPVINTCNGVYCDYFTPNKPYKPTMWSEAWTGWFTELGLPIDQRPVRDLAFAVAR
                     FVQKGGSFFNYYMYHGGTNFGRTGGGPFISTSYDYDAPIDEYGLIREPKYGHLTELHR
                     AIKLCEPALFSSDAKYISLGKMQNAYVYEGNGYCAAFLSNFETNIAVRVMFNNRHYKL
                     PPWSISILPDCKNVVFNTAEVVTQTSRMQMVPSGSSLSSWKSYHEDVSMLTNGGQSLT
                     AVGLLEQISITRDATDYLWYSTSIEINPWERILHGGRRPTLTIHSKGHGVHVFVNGKR
                     YGSAYGTRQDTKFTFSAPVDLQGGTNKIVLLSMSAGLPNIGPQFELRDTGILGHVLLD
                     GLDHGAVDLSMSTWTYKVGLNGETMNLHSPNGISSVEWSRVSLVNGVRQPLKWYKAYF
                     DAPQGNEPLALDMKSMVRGQVWVNGQSIGRYWTINANGTCGVCRYTGAFRPGKCYAGC
                     GEPTQRWYHVPRSWLKPTRNLLVVFEEVGGNVLSINLVKRTHTLICASTFEHHPMIDN
                     FQTESTGEMTMLHDTKVHLRCGLGQSISAIKFASFGTPFGGCGSFQHGTCHAPNSAEL
                     IEKTCLGKESCEVMASNSYFATDPCPNVLKRLLVEAVCSG"
     misc_feature    4..2511
                     /gene="LOC139839372"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
ORIGIN      
        1 atggtggtga tcataaagct tttaagttta tgcataatcg ttacatgctt gcaagtgatt
       61 cattgtagtg tgacttatga tcacaagtct ttaattatta atggtcaaag aaaaattctc
      121 atttctgggt ccatacatta tccaagaagt aaccctgaaa tgtggggtga tttaatgatt
      181 aaagcaaaaa ctgggggctt agatgttatc gacacttacg tgttttggaa cgttcatgag
      241 ccttcacccg ggatttatga ttttagtgga agatatgata tagtaaggtt tgttaagaca
      301 gcggcaagac atggacttta cgtaaattta cgtatggggc cttatgtttg tgctgaatgg
      361 aattatgggg gttttcctgt atggttaaag tatgttcctg gtatcagctt tagaacagac
      421 aatgagccct tcaaggcagc tatgcaaggt tttatacgaa aaattgttga gatgatgaag
      481 gctgaaaagt tgtatgaacc acaaggtggt ccaatcatcc tctcacagat tgaaaacgag
      541 tatggattca aacggaagtc atttggacca gcagaaaaag cgtacataaa ttgggcagcg
      601 aaaatggcag ttgagctgaa taccggagtg ccatggtcta tgagcaagga agaaactgca
      661 cctgaccctg tgataaacac ttgcaatggc gtatactgcg actattttac cccaaacaaa
      721 ccttacaaac ctacaatgtg gagtgaagct tggactggct ggtttacaga attaggactc
      781 ccaattgatc agcgacccgt tcgtgattta gcatttgctg tagctcgttt cgtacagaaa
      841 ggtggctcat ttttcaatta ctacatgtac catggtggaa ccaatttcgg acgcactggt
      901 ggaggccctt ttatcagcac gagctatgac tatgatgcac ctatagatga atacggcttg
      961 attagagaac ctaaatacgg tcatctgaca gagcttcata gggctattaa gttatgtgaa
     1021 ccggctcttt tctcatcgga cgcaaaatat atttctctag ggaaaatgca aaatgcatac
     1081 gtgtatgaag gaaatggata ttgtgccgca ttcctttcga attttgaaac aaatattgct
     1141 gtaagagtta tgttcaacaa tcggcattat aaattgccac cttggtccat tagcatccta
     1201 cccgactgca aaaatgtcgt tttcaatact gcagaggttg taactcaaac ttcacgaatg
     1261 caaatggtac catctggttc tagtttaagt tcatggaaga gttaccatga agatgtctcc
     1321 atgttaacaa atggtgggca atcgttgact gctgttggac ttttggagca gattagtatc
     1381 actagagatg caactgatta tttgtggtac tcgactagta tcgagattaa tccatgggag
     1441 agaattcttc atggagggag aagaccgact ctcactattc attctaaagg acatggagtt
     1501 catgttttcg tgaacggaaa acgttatggg tctgcatatg gaacacgtca agacactaaa
     1561 tttacattta gtgcaccggt tgatcttcaa ggtggaacga ataaaattgt gttacttagt
     1621 atgtctgccg gacttccgaa cattggacca cagtttgagt taagagatac aggaatccta
     1681 ggacatgttt tgcttgatgg gcttgaccat ggagcagttg acttatcgat gtcaacatgg
     1741 acctataagg tggggttgaa tggggaaacg atgaatttac attctccaaa tggcatatca
     1801 tctgttgagt ggagtcgagt ttcattagtc aacggtgtta ggcaaccatt gaaatggtat
     1861 aaggcttatt ttgatgcacc tcaaggtaac gagcctctgg ctttagatat gaaaagtatg
     1921 gtcaggggtc aagtatgggt caatggtcaa agcattggaa ggtattggac aatcaatgca
     1981 aatgggacat gtggagtttg taggtacacc ggggctttcc ggcccgggaa atgttacgca
     2041 ggctgtggtg aaccaactca aagatggtat catgttccac gatcctggtt gaagcctacc
     2101 cgaaatctgt tggtggtatt tgaagaagtt ggtgggaatg tattaagcat aaatttggtg
     2161 aaaagaacac acaccctaat ttgtgcttct acgtttgaac atcacccgat gattgacaat
     2221 tttcaaaccg agagcacagg tgaaatgacc atgcttcacg acactaaggt tcacttgcgt
     2281 tgtggacttg gacagtccat atccgcaatc aagtttgcaa gtttcgggac tccttttggt
     2341 ggttgcggaa gttttcaaca tggcacttgt catgcgccaa actctgctga gctcatagag
     2401 aagacatgtt taggtaagga gagttgtgag gttatggcct caaattcata ctttgcaaca
     2461 gatccgtgtc cgaatgtctt aaagaggtta ttagtggaag ccgtttgttc gggctaatca
     2521 aactaggaag attcagatga ccatggggtt gaagaaactt ggaactattt agcgaatctg
     2581 caacgactat cgagcttgaa gaaatcatga tttagtcaca actacatag
//
LOCUS       XM_071829427            1565 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At1g01500-like (LOC139839373), transcript variant X1, mRNA.
ACCESSION   XM_071829427
VERSION     XM_071829427.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1565
                     /gene="LOC139839373"
                     /note="uncharacterized protein At1g01500-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839373"
     CDS             224..1168
                     /gene="LOC139839373"
                     /codon_start=1
                     /product="uncharacterized protein At1g01500-like"
                     /protein_id="XP_071685528.1"
                     /db_xref="GeneID:139839373"
                     /translation="MENSNGTTKNNLQIIKYPTHQPYTYTKPLLAWFDIRVFYVRISN
                     FMVEGYTPEYLTLSHIPLDPDTILEVNKKRCSLDSPGSSCRLKRNRVDKKFEEATFVS
                     TDSIRLSGSVKFEVFDGEDLILSGVLEMSKNSNGFVGKTKNNDVERWSMKCESMIGAN
                     SRVMKGKQFMGPDSMLPMIEIYVAGSFMGSPIILTKTLQISFRKMQNRKGLLDPIPEG
                     EAADSRRDFANGHDLDPQESEYGPYKSDNEYEYNNGSLHYHQNEYMEGEDGELTWFNA
                     GVRVGVGLGLGICLGVGLGVGLLVRTYQSTTRNFRRRL"
ORIGIN      
        1 agtggctccg ttttctttaa attaccccca aaaagtttca atcttttttc agggttctca
       61 attacaagga gatctaaagc gatttcgtga tagcgattaa tgaatttact tgtggcctgt
      121 atttgatttc aatatttatt caattcaaag tgggtgctca gagatatact ttatttaggg
      181 gttgactatt tgacctttcc atgagaataa agttcccaaa aacatggaaa attcaaacgg
      241 aacgacgaaa aacaaccttc agattatcaa gtatccaact caccaaccgt acacatacac
      301 aaaaccgtta ctagcttggt ttgatatacg cgtgttttat gttcgaatca gcaattttat
      361 ggtggaaggg tacacacctg aatatctcac tctaagccat ataccattag accccgatac
      421 gattcttgaa gtcaacaaaa aaagatgctc ccttgactcc ccgggaagtt catgtcgttt
      481 aaaaagaaac cgagttgaca aaaagttcga agaagctacg tttgtgagca ccgatagtat
      541 aagattatcg ggtagtgtaa aattcgaggt ctttgatggt gaagatctta tactttcggg
      601 cgtattggag atgtctaaaa atagtaacgg ttttgttggt aaaacgaaga acaatgatgt
      661 tgagagatgg agtatgaaat gtgaatcgat gattggtgct aattctaggg ttatgaaggg
      721 gaaacaattt atgggtcccg attcgatgtt acctatgatt gaaatttatg ttgcgggttc
      781 gtttatgggt tcgcctatta ttttgaccaa gactttgcag attagtttca ggaaaatgca
      841 aaatcgaaaa gggttgttgg atccgatccc tgagggtgag gcggctgact ctcgaagaga
      901 ttttgcaaat ggacatgatc ttgatcctca ggaatctgaa tacggaccat acaagagtga
      961 caacgaatat gagtacaaca atggcagctt gcattatcat caaaacgagt acatggaagg
     1021 cgaagatgga gagctcacat ggtttaatgc cggtgtaagg gtcggtgttg gtttaggcct
     1081 tggaatatgc cttggagtcg gacttggtgt cggccttcta gttcgcactt atcaatctac
     1141 aactcgaaac ttcagaaggc gactttaata attcatatga agttttttgc ttcttttttt
     1201 ttttttttcc cccttttctt ttaagcgttt gatatgttta actttagagt gtgttgatag
     1261 cttattggga tgagttaaac tacacagatt atgaaacatc gagtaatgtt ttgggaaatt
     1321 gatgaaaata cacttttttt taaggcttca aacaaaatac acttttttgt taaaaaaaaa
     1381 attgtctttt tacatcattc ggtagacggg atttctgtct accaccttta tctgtcgtct
     1441 actaccattt ttacaaagta gtagacagtg acaacaaggt agtagacaga gagaacaaag
     1501 cagtagacag ccagctgacc gtttactgcc ttgttgttac tgtctactac cttgttgtag
     1561 gtgtc
//
LOCUS       XM_071829428            1538 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At1g01500-like (LOC139839373), transcript variant X2, mRNA.
ACCESSION   XM_071829428
VERSION     XM_071829428.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1538
                     /gene="LOC139839373"
                     /note="uncharacterized protein At1g01500-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839373"
     CDS             196..1140
                     /gene="LOC139839373"
                     /codon_start=1
                     /product="uncharacterized protein At1g01500-like"
                     /protein_id="XP_071685529.1"
                     /db_xref="GeneID:139839373"
                     /translation="MENSNGTTKNNLQIIKYPTHQPYTYTKPLLAWFDIRVFYVRISN
                     FMVEGYTPEYLTLSHIPLDPDTILEVNKKRCSLDSPGSSCRLKRNRVDKKFEEATFVS
                     TDSIRLSGSVKFEVFDGEDLILSGVLEMSKNSNGFVGKTKNNDVERWSMKCESMIGAN
                     SRVMKGKQFMGPDSMLPMIEIYVAGSFMGSPIILTKTLQISFRKMQNRKGLLDPIPEG
                     EAADSRRDFANGHDLDPQESEYGPYKSDNEYEYNNGSLHYHQNEYMEGEDGELTWFNA
                     GVRVGVGLGLGICLGVGLGVGLLVRTYQSTTRNFRRRL"
ORIGIN      
        1 gagaatcgta ttagggttac tgagttttag ttaagcattg cacacacaaa aaccatacaa
       61 acacacactg atattaacat ttatattttc aatttttcaa taataaattg tataagggag
      121 catttattgg attttggatg catgatttct gggttgacta tttgaccttt ccatgagaat
      181 aaagttccca aaaacatgga aaattcaaac ggaacgacga aaaacaacct tcagattatc
      241 aagtatccaa ctcaccaacc gtacacatac acaaaaccgt tactagcttg gtttgatata
      301 cgcgtgtttt atgttcgaat cagcaatttt atggtggaag ggtacacacc tgaatatctc
      361 actctaagcc atataccatt agaccccgat acgattcttg aagtcaacaa aaaaagatgc
      421 tcccttgact ccccgggaag ttcatgtcgt ttaaaaagaa accgagttga caaaaagttc
      481 gaagaagcta cgtttgtgag caccgatagt ataagattat cgggtagtgt aaaattcgag
      541 gtctttgatg gtgaagatct tatactttcg ggcgtattgg agatgtctaa aaatagtaac
      601 ggttttgttg gtaaaacgaa gaacaatgat gttgagagat ggagtatgaa atgtgaatcg
      661 atgattggtg ctaattctag ggttatgaag gggaaacaat ttatgggtcc cgattcgatg
      721 ttacctatga ttgaaattta tgttgcgggt tcgtttatgg gttcgcctat tattttgacc
      781 aagactttgc agattagttt caggaaaatg caaaatcgaa aagggttgtt ggatccgatc
      841 cctgagggtg aggcggctga ctctcgaaga gattttgcaa atggacatga tcttgatcct
      901 caggaatctg aatacggacc atacaagagt gacaacgaat atgagtacaa caatggcagc
      961 ttgcattatc atcaaaacga gtacatggaa ggcgaagatg gagagctcac atggtttaat
     1021 gccggtgtaa gggtcggtgt tggtttaggc cttggaatat gccttggagt cggacttggt
     1081 gtcggccttc tagttcgcac ttatcaatct acaactcgaa acttcagaag gcgactttaa
     1141 taattcatat gaagtttttt gcttcttttt tttttttttt cccccttttc ttttaagcgt
     1201 ttgatatgtt taactttaga gtgtgttgat agcttattgg gatgagttaa actacacaga
     1261 ttatgaaaca tcgagtaatg ttttgggaaa ttgatgaaaa tacacttttt tttaaggctt
     1321 caaacaaaat acactttttt gttaaaaaaa aaattgtctt tttacatcat tcggtagacg
     1381 ggatttctgt ctaccacctt tatctgtcgt ctactaccat ttttacaaag tagtagacag
     1441 tgacaacaag gtagtagaca gagagaacaa agcagtagac agccagctga ccgtttactg
     1501 ccttgttgtt actgtctact accttgttgt aggtgtcg
//
LOCUS       XR_011756926            2344 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839374), transcript variant X1, ncRNA.
ACCESSION   XR_011756926
VERSION     XR_011756926.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2344
                     /gene="LOC139839374"
                     /note="uncharacterized LOC139839374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839374"
     ncRNA           1..2344
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839374"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839374"
ORIGIN      
        1 aaaaccgttt tacatcctta agaaaactga tgccgctgaa caaccgtttt attttctctc
       61 cctaaattaa atatcgcatc atcatcatcg ttcgcgagat tggcagaaat tagggtttcg
      121 atcgacggat ctaaaataaa gatcagtctg aagttttcgt tctaaatttg atgtttattt
      181 tttatcgatt gctttaagtt ttagtgcatc ttgactgctg cccatcttat tgattgtttt
      241 aagtttcaaa cactacgttt cctgttaata tgtactggga aaaggagacg tagtttccta
      301 ttgatggtgc ttaactgctt aagattttaa taatctaacg ccactatatg acttttggaa
      361 tttggtgtac tgatgatcat aaagtatggt agatggttaa tggtgaagga gagccattta
      421 aagaataaat ttgagtgtgt atgactgaaa tttgtagatt ggctctggcg atggttatag
      481 agttcagtcg catatccaat gaaagtacaa acatgattag atttattcat ttttcggtga
      541 tgtttatttg tttttgcata gagtaacaat gttcatttga attgagtatc ctcgtcaacg
      601 ctttcattga tattaaagca ggaaatgtat ttttatcaat tacaaatttt tgtagtttct
      661 tgaagacgca taaggtgttc gatgaaatgt taatggcata taatgacagt tttggatccg
      721 ttacaatttt aatcagaatg ttgattatga caaagaagct tctgtgctca aaatacgttg
      781 gaatatcaac ctagaaattg agtatattaa cgcataaata aaagtgatgc aatcacctat
      841 ggatggtaat atgcggccaa catcgatttt tagaagataa tcttcttact gttggaccca
      901 aggtaatata tgcttaaagc ttaatatgtt catctcagtt tatgtgtagt atttcttcac
      961 gattgcatgt ttaactgtca taaagaaaat cggaaggaaa tctgaagtat gttaacaata
     1021 caattaattt ggtattatcc atatgttctt cattatgaaa ttgtgaaagc atatatggat
     1081 attcgaaggg ctccattcac aaaggtacac aatacttttt tttaataaac ttataatata
     1141 caagaatcta attgttgggt tggttggaat gtgatttagg gatggctgga atcaatcgcg
     1201 cttctttcgt ggtaatatgt attgtttctt catttcaaat ttgacgttgt tatggaatat
     1261 gttgaatggt taacgatagt cttatttttg tatgaagtta gtaaccttaa gttggtttac
     1321 ctcaaatttg gttaaattat aaaacttatt gttttgacta aagaaactct tttctgttgt
     1381 tatcaactat tgtaccgagg tatggagaaa cttggacata taatgtgtta ttgtgttgca
     1441 aaaaaattgg cagtgtaatg gtatgagata caactcaata ttaattatct aaatttttta
     1501 aattaaatga atctttattt ataaatgggt agataacttc attattgttc tgattgatcc
     1561 acttcacttg aatcacgaac taaaaatcac atattgacgt gtaagttata gataaagatt
     1621 aaaaaattac tttcgaagat atatgtaagt tattaatttt atcttttaat gaagtgtaat
     1681 tttaagtgaa tatgcgattt tcagttcata aattaagtga agtggtaatg attaggcact
     1741 cttttaattc cttctttgtt tcttttttga tgcattatcc aggaattgat cagccggcat
     1801 ttgtttcggt tggtgtctga ttgaaagcaa atgttgatta ggtattcatc aaacatttta
     1861 gtgagaaaag ggttggtgat atagaagtct tgagcactta tctgaaggga catttgtttg
     1921 cgaatacgtt gaataaattg taacagttgt gagttatttc atcaaaacga acaaaacaag
     1981 gataagaagc ataaatactc agtgttattg aatgcttatt ggataccttt gggtttctca
     2041 agatgatgat gccctgtgtt tggatgcaac atcttatgca aatgtttcgc gtttcattaa
     2101 ccagaggtgt gctatctttt ctttttttgt gcgtgtgttg gtgtccatga acatgagcgt
     2161 gtgtgcaggt taaaggttta atatatatat ccaaaccaaa tctcattttt aatcaaagca
     2221 catgttaaga gattggaaaa taaagtaaaa aagctgtgga tgtgtagtgc ataagaaatg
     2281 agatcattat aaacaactta ttttatttgt tgcttagttt tatttatctg ttacacttac
     2341 atat
//
LOCUS       XR_011756927            2320 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839374), transcript variant X2, ncRNA.
ACCESSION   XR_011756927
VERSION     XR_011756927.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2320
                     /gene="LOC139839374"
                     /note="uncharacterized LOC139839374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839374"
     ncRNA           1..2320
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839374"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839374"
ORIGIN      
        1 aaaaccgttt tacatcctta agaaaactga tgccgctgaa caaccgtttt attttctctc
       61 cctaaattaa atatcgcatc atcatcatcg ttcgcgagat tggcagaaat tagggtttcg
      121 atcgacggat ctaaaataaa gatcagtctg aagttttcgt tctaaatttg atgtttattt
      181 tttatcgatt gctttaagtt ttagtgcatc ttgactgctg cccatcttat tgattgtttt
      241 aagtttcaaa cactacgttt cctgttaata tgtactggga aaaggagacg tagtttccta
      301 ttgatggtgc ttaactgctt aagattttaa taatctaacg ccactatatg acttttggaa
      361 tttggtgtac tgatgatcat aaagtatggt agatggttaa tggtgaagga gagccattta
      421 aagaataaat ttgagtgtgt atgactgaaa tttgtagatt ggctctggcg atggttatag
      481 agttcagtcg catatccaat gaaagtacaa acatgattag atttattcat ttttcggtga
      541 tgtttatttg tttttgcata gagtaacaat gttcatttga attgagtatc ctcgtcaacg
      601 ctttcattga tattaaagca ggaaatgtat ttttatcaat tacaaatttt tgtagtttct
      661 tgaagacgca taaggtgttc gatgaaatgt taatggcata taatgacagt tttggatccg
      721 ttacaatttt aatcagaatg ttgattatga caaagaagct tctgtgctca aaatacgttg
      781 gaatatcaac ctagaaattg agtatattaa cgcataaata aaagtgatgc aatcacctat
      841 ggatggtaat atgcggccaa catcgatttt tagaagataa tcttcttact gttggaccca
      901 aggtaatata tgcttaaagc ttaatatgtt catctcagtt tatgtgtagt atttcttcac
      961 gattgcatgt ttaactgtca taaagaaaat cggaaggaaa tctgaagtat gttaacaata
     1021 caattaattt ggtattatcc atatgttctt cattatgaaa ttgtgaaagc atatatggat
     1081 attcgaaggg ctccattcac aaaggtacac aatacttttt tttaataaac ttataatata
     1141 caagaatcta attgttgggt tggttggaat gtgatttagg gatggctgga atcaatcgcg
     1201 cttctttcgt ggtaatatgt attgtttctt catttcaaat ttgacgttgt tatggaatat
     1261 gttgaatggt taacgatagt cttatttttg tatgaagtta gtaaccttaa gttggtttac
     1321 ctcaaatttg gttaaattat aaaacttatt gttttgacta aagaaactct tttctgttgt
     1381 tatcaactat tgtaccgagg tatggagaaa cttggacata taatgtgtta ttgtgttgca
     1441 aaaaaattgg cagtgtaatg gtatgagata caactcaata ttaattatct aaatttttta
     1501 aattaaatga atctttattt ataaatgggt agataacttc attattgttc tgattgatcc
     1561 acttcacttg aatcacgaac taaaaatcac atattgacgt gtaagttata gataaagatt
     1621 aaaaaattac tttcgaagat atatgtaagt tattaatttt atcttttaat gaagtgtaat
     1681 tttaagtgaa tatgcgattt tcagttcata aattaagtga agtggtaatg attaggcact
     1741 cttttaattc cttctttgtt tcttttttga tgcattatcc aggaattgat cagccggcat
     1801 ttgtttcggt tggtgtctga ttgaaagcaa atgttgatta gaaaagggtt ggtgatatag
     1861 aagtcttgag cacttatctg aagggacatt tgtttgcgaa tacgttgaat aaattgtaac
     1921 agttgtgagt tatttcatca aaacgaacaa aacaaggata agaagcataa atactcagtg
     1981 ttattgaatg cttattggat acctttgggt ttctcaagat gatgatgccc tgtgtttgga
     2041 tgcaacatct tatgcaaatg tttcgcgttt cattaaccag aggtgtgcta tcttttcttt
     2101 ttttgtgcgt gtgttggtgt ccatgaacat gagcgtgtgt gcaggttaaa ggtttaatat
     2161 atatatccaa accaaatctc atttttaatc aaagcacatg ttaagagatt ggaaaataaa
     2221 gtaaaaaagc tgtggatgtg tagtgcataa gaaatgagat cattataaac aacttatttt
     2281 atttgttgct tagttttatt tatctgttac acttacatat
//
LOCUS       XR_011756928            2261 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839374), transcript variant X3, ncRNA.
ACCESSION   XR_011756928
VERSION     XR_011756928.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2261
                     /gene="LOC139839374"
                     /note="uncharacterized LOC139839374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839374"
     ncRNA           1..2261
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839374"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839374"
ORIGIN      
        1 aaaaccgttt tacatcctta agaaaactga tgccgctgaa caaccgtttt attttctctc
       61 cctaaattaa atatcgcatc atcatcatcg ttcgcgagat tggcagaaat tagggtttcg
      121 atcgacggat ctaaaataaa gatcagtctg aagttttcgt tctaaatttg atgtttattt
      181 tttatcgatt gctttaagtt ttagtgcatc ttgactgctg cccatcttat tgattgtttt
      241 aagtttcaaa cactacgttt cctgttaata tgtactggga aaaggagacg tagtttccta
      301 ttgatggtgc ttaactgctt aagattttaa taatctaacg ccactatatg acttttggaa
      361 tttggtgtac tgatgatcat aaagtatggt agatggttaa tggtgaagga gagccattta
      421 aagaataaat ttgagtgtgt atgactgaaa tttgtagatt ggctctggcg atggttatag
      481 agttcagtcg catatccaat gaaagtacaa acatgattag atttattcat ttttcggtga
      541 tgtttatttg tttttgcata gagtaacaat gttcatttga attgagtatc ctcgtcaacg
      601 ctttcattga tattaaagca ggaaatgtat ttttatcaat tacaaatttt tgtagtttct
      661 tgaagacgca taaggtgttc gatgaaatgt taatggcata taatgacagt tttggatccg
      721 ttacaatttt aatcagaatg ttgattatga caaagaagct tctgtgctca aaatacgttg
      781 gaatatcaac ctagaaattg agtatattaa cgcataaata aaagtgatgc aatcacctat
      841 ggatggtaat atgcggccaa catcgatttt tagaagataa tcttcttact gttggaccca
      901 agaaaatcgg aaggaaatct gaagtatgtt aacaatacaa ttaatttggt attatccata
      961 tgttcttcat tatgaaattg tgaaagcata tatggatatt cgaagggctc cattcacaaa
     1021 ggtacacaat actttttttt aataaactta taatatacaa gaatctaatt gttgggttgg
     1081 ttggaatgtg atttagggat ggctggaatc aatcgcgctt ctttcgtggt aatatgtatt
     1141 gtttcttcat ttcaaatttg acgttgttat ggaatatgtt gaatggttaa cgatagtctt
     1201 atttttgtat gaagttagta accttaagtt ggtttacctc aaatttggtt aaattataaa
     1261 acttattgtt ttgactaaag aaactctttt ctgttgttat caactattgt accgaggtat
     1321 ggagaaactt ggacatataa tgtgttattg tgttgcaaaa aaattggcag tgtaatggta
     1381 tgagatacaa ctcaatatta attatctaaa ttttttaaat taaatgaatc tttatttata
     1441 aatgggtaga taacttcatt attgttctga ttgatccact tcacttgaat cacgaactaa
     1501 aaatcacata ttgacgtgta agttatagat aaagattaaa aaattacttt cgaagatata
     1561 tgtaagttat taattttatc ttttaatgaa gtgtaatttt aagtgaatat gcgattttca
     1621 gttcataaat taagtgaagt ggtaatgatt aggcactctt ttaattcctt ctttgtttct
     1681 tttttgatgc attatccagg aattgatcag ccggcatttg tttcggttgg tgtctgattg
     1741 aaagcaaatg ttgattaggt attcatcaaa cattttagtg agaaaagggt tggtgatata
     1801 gaagtcttga gcacttatct gaagggacat ttgtttgcga atacgttgaa taaattgtaa
     1861 cagttgtgag ttatttcatc aaaacgaaca aaacaaggat aagaagcata aatactcagt
     1921 gttattgaat gcttattgga tacctttggg tttctcaaga tgatgatgcc ctgtgtttgg
     1981 atgcaacatc ttatgcaaat gtttcgcgtt tcattaacca gaggtgtgct atcttttctt
     2041 tttttgtgcg tgtgttggtg tccatgaaca tgagcgtgtg tgcaggttaa aggtttaata
     2101 tatatatcca aaccaaatct catttttaat caaagcacat gttaagagat tggaaaataa
     2161 agtaaaaaag ctgtggatgt gtagtgcata agaaatgaga tcattataaa caacttattt
     2221 tatttgttgc ttagttttat ttatctgtta cacttacata t
//
LOCUS       XR_011756929            2269 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839374), transcript variant X4, ncRNA.
ACCESSION   XR_011756929
VERSION     XR_011756929.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2269
                     /gene="LOC139839374"
                     /note="uncharacterized LOC139839374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839374"
     ncRNA           1..2269
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839374"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839374"
ORIGIN      
        1 aaaaccgttt tacatcctta agaaaactga tgccgctgaa caaccgtttt attttctctc
       61 cctaaattaa atatcgcatc atcatcatcg ttcgcgagat tggcagaaat tagggtttcg
      121 atcgacggat ctaaaataaa gatcagtctg aagttttcgt tctaaatttg atgtttattt
      181 tttatcgatt gctttaagtt ttagtgcatc ttgactgctg cccatcttat tgattgtttt
      241 aagtttcaaa cactacgttt cctgttaata tgtactggga aaaggagacg tagtttccta
      301 ttgatggtgc ttaactgctt aagattttaa taatctaacg ccactatatg acttttggaa
      361 tttggtgtac tgatgatcat aaagtatggt agatggttaa tggtgaagga gagccattta
      421 aagaataaat ttgagtgtgt atgactgaaa tttgtagatt ggctctggcg atggttatag
      481 agttcagtcg catatccaat gaaagtacaa acatgattag atttattcat ttttcggtga
      541 tgtttatttg tttttgcata gagtaacaat gttcatttga attgagtatc ctcgtcaacg
      601 ctttcattga tattaaagca ggaaatgtat ttttatcaat tacaaatttt tgtagtttct
      661 tgaagacgca taaggtgttc gatgaaatgt taatggcata taatgacagt tttggatccg
      721 ttacaatttt aatcagaatg ttgattatga caaagaagct tctgtgctca aaatacgttg
      781 gaatatcaac ctagaaattg agtatattaa cgcataaata aaagtgatgc aatcacctat
      841 ggatggtaat atgcggccaa catcgatttt tagaagataa tcttcttact gttggaccca
      901 aggtaatata tgcttaaagc ttaatatgtt catctcagtt tatgtgtagt atttcttcac
      961 gattgcatgt ttaactgtca taaagaaaat cggaaggaaa tctgaagtat gttaacaata
     1021 caattaattt ggtattatcc atatgttctt cattatgaaa ttgtgaaagc atatatggat
     1081 attcgaaggg ctccattcac aaagggatgg ctggaatcaa tcgcgcttct ttcgtggtaa
     1141 tatgtattgt ttcttcattt caaatttgac gttgttatgg aatatgttga atggttaacg
     1201 atagtcttat ttttgtatga agttagtaac cttaagttgg tttacctcaa atttggttaa
     1261 attataaaac ttattgtttt gactaaagaa actcttttct gttgttatca actattgtac
     1321 cgaggtatgg agaaacttgg acatataatg tgttattgtg ttgcaaaaaa attggcagtg
     1381 taatggtatg agatacaact caatattaat tatctaaatt ttttaaatta aatgaatctt
     1441 tatttataaa tgggtagata acttcattat tgttctgatt gatccacttc acttgaatca
     1501 cgaactaaaa atcacatatt gacgtgtaag ttatagataa agattaaaaa attactttcg
     1561 aagatatatg taagttatta attttatctt ttaatgaagt gtaattttaa gtgaatatgc
     1621 gattttcagt tcataaatta agtgaagtgg taatgattag gcactctttt aattccttct
     1681 ttgtttcttt tttgatgcat tatccaggaa ttgatcagcc ggcatttgtt tcggttggtg
     1741 tctgattgaa agcaaatgtt gattaggtat tcatcaaaca ttttagtgag aaaagggttg
     1801 gtgatataga agtcttgagc acttatctga agggacattt gtttgcgaat acgttgaata
     1861 aattgtaaca gttgtgagtt atttcatcaa aacgaacaaa acaaggataa gaagcataaa
     1921 tactcagtgt tattgaatgc ttattggata cctttgggtt tctcaagatg atgatgccct
     1981 gtgtttggat gcaacatctt atgcaaatgt ttcgcgtttc attaaccaga ggtgtgctat
     2041 cttttctttt tttgtgcgtg tgttggtgtc catgaacatg agcgtgtgtg caggttaaag
     2101 gtttaatata tatatccaaa ccaaatctca tttttaatca aagcacatgt taagagattg
     2161 gaaaataaag taaaaaagct gtggatgtgt agtgcataag aaatgagatc attataaaca
     2221 acttatttta tttgttgctt agttttattt atctgttaca cttacatat
//
LOCUS       XR_011756930            2339 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839374), transcript variant X5, ncRNA.
ACCESSION   XR_011756930
VERSION     XR_011756930.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2339
                     /gene="LOC139839374"
                     /note="uncharacterized LOC139839374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839374"
     ncRNA           1..2339
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839374"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839374"
ORIGIN      
        1 aaaaccgttt tacatcctta agaaaactga tgccgctgaa caaccgtttt attttctctc
       61 cctaaattaa atatcgcatc atcatcatcg ttcgcgagat tggcagaaat tagggtttcg
      121 atcgacggat ctaaaataaa gatcagtctg aagttttcgt tctaaatttg atgtttattt
      181 tttatcgatt gctttaagtt ttagtgcatc ttgactgctg cccatcttat tgattgtttt
      241 aagtttcaaa cactacgttt cctgttaata tgtactggga aaaggagacg tagtttccta
      301 ttgatggtgc ttaactgctt aagattttaa taatctaacg ccactatatg acttttggaa
      361 tttggtgtac tgatgatcat aaagtatggt agatggttaa tggtgaagga gagccattta
      421 aagaataaat ttgagtgtgt atgactgaaa tttgtagatt ggctctggcg atggttatag
      481 agttcagtcg catatccaat gaaagtacaa acatgattag atttattcat ttttcggtga
      541 tgtttatttg tttttgcata gagtaacaat gttcatttga attgagtatc ctcgtcaacg
      601 ctttcattga tattaaagca ggaaatgtat ttttatcaat tacaaatttt tgtagtttct
      661 tgaagacgca taaggtgttc gatgaaatgt taatggcata taatgacagt tttggatccg
      721 ttacaatttt aatcagaatg ttgattatga caaagaagct tctgtgctca aaatacgttg
      781 gaatatcaac ctagaaattg agtatattaa cgcataaata aaagtgatgc aatcacctat
      841 ggatggtaat atgcggccaa catcgatttt tagaagataa tcttcttact gttggaccca
      901 aggtaatata tgcttaaagc ttaatatgtt catctcagtt tatgtgtagt atttcttcac
      961 gattgcatgt ttaactgtca taaagaaaat cggaaggaaa tctgaagtat gttaacaata
     1021 caattaattt ggtattatcc atatgttctt cattatgaaa ttgtgaaagc atatatggat
     1081 attcgaaggg ctccattcac aaaggtacac aatacttttt tttaataaac ttataatata
     1141 caagaatcta attgttgggt tggttggaat gtgatttagg gatggctgga atcaatcgcg
     1201 cttctttcgt ggtaatatgt attgtttctt catttcaaat ttgacgttgt tatggaatat
     1261 gttgaatggt taacgatagt cttatttttg tatgaagtta gtaaccttaa gttggtttac
     1321 ctcaaatttg gttaaattat aaaacttatt gttttgacta aagaaactct tttctgttgt
     1381 tatcaactat tgtaccgagg tatggagaaa cttggacata taatgtgtta ttgtgttgca
     1441 aaaaaattgg cagtgtaatg gtatgagata caactcaata ttaattatct aaatttttta
     1501 aattaaatga atctttattt ataaatgggt agataacttc attattgttc tgattgatcc
     1561 acttcacttg aatcacgaac taaaaatcac atattgacgt gtaagttata gataaagatt
     1621 aaaaaattac tttcgaagat atatgtaagt tattaatttt atcttttaat gaagtgtaat
     1681 tttaagtgaa tatgcgattt tcagttcata aattaagtga agtggtaatg attaggcact
     1741 cttttaattc cttctttgtt tcttttttga tgcattatcc aggaattgat cagccggcat
     1801 ttgtttcggt tggtgtctga ttgaaagcaa atgttgatta ggtattcatc aaacatttta
     1861 gtgagggttg gtgatataga agtcttgagc acttatctga agggacattt gtttgcgaat
     1921 acgttgaata aattgtaaca gttgtgagtt atttcatcaa aacgaacaaa acaaggataa
     1981 gaagcataaa tactcagtgt tattgaatgc ttattggata cctttgggtt tctcaagatg
     2041 atgatgccct gtgtttggat gcaacatctt atgcaaatgt ttcgcgtttc attaaccaga
     2101 ggtgtgctat cttttctttt tttgtgcgtg tgttggtgtc catgaacatg agcgtgtgtg
     2161 caggttaaag gtttaatata tatatccaaa ccaaatctca tttttaatca aagcacatgt
     2221 taagagattg gaaaataaag taaaaaagct gtggatgtgt agtgcataag aaatgagatc
     2281 attataaaca acttatttta tttgttgctt agttttattt atctgttaca cttacatat
//
LOCUS       XR_011756931            2193 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839374), transcript variant X6, ncRNA.
ACCESSION   XR_011756931
VERSION     XR_011756931.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2193
                     /gene="LOC139839374"
                     /note="uncharacterized LOC139839374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839374"
     ncRNA           1..2193
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839374"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139839374"
ORIGIN      
        1 aaaaccgttt tacatcctta agaaaactga tgccgctgaa caaccgtttt attttctctc
       61 cctaaattaa atatcgcatc atcatcatcg ttcgcgagat tggcagaaat tagggtttcg
      121 atcgacggat ctaaaataaa gatcagtctg aagttttcgt tctaaatttg atgtttattt
      181 tttatcgatt gctttaagtt ttagtgcatc ttgactgctg cccatcttat tgattgtttt
      241 aagtttcaaa cactacgttt cctgttaata tgtactggga aaaggagacg tagtttccta
      301 ttgatggtgc ttaactgctt aagattttaa taatctaacg ccactatatg acttttggaa
      361 tttggtgtac tgatgatcat aaagtatggt agatggttaa tggtgaagga gagccattta
      421 aagaataaat ttgagtgtgt atgactgaaa tttgtagatt ggctctggcg atggttatag
      481 agttcagtcg catatccaat gaaatttctt gaagacgcat aaggtgttcg atgaaatgtt
      541 aatggcatat aatgacagtt ttggatccgt tacaatttta atcagaatgt tgattatgac
      601 aaagaagctt ctgtgctcaa aatacgttgg aatatcaacc tagaaattga gtatattaac
      661 gcataaataa aagtgatgca atcacctatg gatggtaata tgcggccaac atcgattttt
      721 agaagataat cttcttactg ttggacccaa ggtaatatat gcttaaagct taatatgttc
      781 atctcagttt atgtgtagta tttcttcacg attgcatgtt taactgtcat aaagaaaatc
      841 ggaaggaaat ctgaagtatg ttaacaatac aattaatttg gtattatcca tatgttcttc
      901 attatgaaat tgtgaaagca tatatggata ttcgaagggc tccattcaca aaggtacaca
      961 atactttttt ttaataaact tataatatac aagaatctaa ttgttgggtt ggttggaatg
     1021 tgatttaggg atggctggaa tcaatcgcgc ttctttcgtg gtaatatgta ttgtttcttc
     1081 atttcaaatt tgacgttgtt atggaatatg ttgaatggtt aacgatagtc ttatttttgt
     1141 atgaagttag taaccttaag ttggtttacc tcaaatttgg ttaaattata aaacttattg
     1201 ttttgactaa agaaactctt ttctgttgtt atcaactatt gtaccgaggt atggagaaac
     1261 ttggacatat aatgtgttat tgtgttgcaa aaaaattggc agtgtaatgg tatgagatac
     1321 aactcaatat taattatcta aattttttaa attaaatgaa tctttattta taaatgggta
     1381 gataacttca ttattgttct gattgatcca cttcacttga atcacgaact aaaaatcaca
     1441 tattgacgtg taagttatag ataaagatta aaaaattact ttcgaagata tatgtaagtt
     1501 attaatttta tcttttaatg aagtgtaatt ttaagtgaat atgcgatttt cagttcataa
     1561 attaagtgaa gtggtaatga ttaggcactc ttttaattcc ttctttgttt cttttttgat
     1621 gcattatcca ggaattgatc agccggcatt tgtttcggtt ggtgtctgat tgaaagcaaa
     1681 tgttgattag gtattcatca aacattttag tgagaaaagg gttggtgata tagaagtctt
     1741 gagcacttat ctgaagggac atttgtttgc gaatacgttg aataaattgt aacagttgtg
     1801 agttatttca tcaaaacgaa caaaacaagg ataagaagca taaatactca gtgttattga
     1861 atgcttattg gatacctttg ggtttctcaa gatgatgatg ccctgtgttt ggatgcaaca
     1921 tcttatgcaa atgtttcgcg tttcattaac cagaggtgtg ctatcttttc tttttttgtg
     1981 cgtgtgttgg tgtccatgaa catgagcgtg tgtgcaggtt aaaggtttaa tatatatatc
     2041 caaaccaaat ctcattttta atcaaagcac atgttaagag attggaaaat aaagtaaaaa
     2101 agctgtggat gtgtagtgca taagaaatga gatcattata aacaacttat tttatttgtt
     2161 gcttagtttt atttatctgt tacacttaca tat
//
LOCUS       XR_011756932            2225 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839374), transcript variant X7, ncRNA.
ACCESSION   XR_011756932
VERSION     XR_011756932.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2225
                     /gene="LOC139839374"
                     /note="uncharacterized LOC139839374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839374"
     ncRNA           1..2225
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839374"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139839374"
ORIGIN      
        1 aaaaccgttt tacatcctta agaaaactga tgccgctgaa caaccgtttt attttctctc
       61 cctaaattaa atatcgcatc atcatcatcg ttcgcgagat tggcagaaat tagggtttcg
      121 atcgacggat ctaaaataaa gatcagtctg aagttttcgt tctaaatttg atgtttattt
      181 tttatcgatt gctttaagtt ttagtgcatc ttgactgctg cccatcttat tgattgtttt
      241 aagtttcaaa cactacgttt cctgttaata tgtactggga aaaggagacg tagtttccta
      301 ttgatggtgc ttaactgctt aagattttaa taatctaacg ccactatatg acttttggaa
      361 tttggtgtac tgatgatcat aaagtatggt agatggttaa tggtgaagga gagccattta
      421 aagaataaat ttgagtgtgt atgactgaaa tttgtagatt ggctctggcg atggttatag
      481 agttcagtcg catatccaat gaaagtacaa acatgattag atttattcat ttttcgtttc
      541 ttgaagacgc ataaggtgtt cgatgaaatg ttaatggcat ataatgacag ttttggatcc
      601 gttacaattt taatcagaat gttgattatg acaaagaagc ttctgtgctc aaaatacgtt
      661 ggaatatcaa cctagaaatt gagtatatta acgcataaat aaaagtgatg caatcaccta
      721 tggatggtaa tatgcggcca acatcgattt ttagaagata atcttcttac tgttggaccc
      781 aaggtaatat atgcttaaag cttaatatgt tcatctcagt ttatgtgtag tatttcttca
      841 cgattgcatg tttaactgtc ataaagaaaa tcggaaggaa atctgaagta tgttaacaat
      901 acaattaatt tggtattatc catatgttct tcattatgaa attgtgaaag catatatgga
      961 tattcgaagg gctccattca caaaggtaca caatactttt ttttaataaa cttataatat
     1021 acaagaatct aattgttggg ttggttggaa tgtgatttag ggatggctgg aatcaatcgc
     1081 gcttctttcg tggtaatatg tattgtttct tcatttcaaa tttgacgttg ttatggaata
     1141 tgttgaatgg ttaacgatag tcttattttt gtatgaagtt agtaacctta agttggttta
     1201 cctcaaattt ggttaaatta taaaacttat tgttttgact aaagaaactc ttttctgttg
     1261 ttatcaacta ttgtaccgag gtatggagaa acttggacat ataatgtgtt attgtgttgc
     1321 aaaaaaattg gcagtgtaat ggtatgagat acaactcaat attaattatc taaatttttt
     1381 aaattaaatg aatctttatt tataaatggg tagataactt cattattgtt ctgattgatc
     1441 cacttcactt gaatcacgaa ctaaaaatca catattgacg tgtaagttat agataaagat
     1501 taaaaaatta ctttcgaaga tatatgtaag ttattaattt tatcttttaa tgaagtgtaa
     1561 ttttaagtga atatgcgatt ttcagttcat aaattaagtg aagtggtaat gattaggcac
     1621 tcttttaatt ccttctttgt ttcttttttg atgcattatc caggaattga tcagccggca
     1681 tttgtttcgg ttggtgtctg attgaaagca aatgttgatt aggtattcat caaacatttt
     1741 agtgagaaaa gggttggtga tatagaagtc ttgagcactt atctgaaggg acatttgttt
     1801 gcgaatacgt tgaataaatt gtaacagttg tgagttattt catcaaaacg aacaaaacaa
     1861 ggataagaag cataaatact cagtgttatt gaatgcttat tggatacctt tgggtttctc
     1921 aagatgatga tgccctgtgt ttggatgcaa catcttatgc aaatgtttcg cgtttcatta
     1981 accagaggtg tgctatcttt tctttttttg tgcgtgtgtt ggtgtccatg aacatgagcg
     2041 tgtgtgcagg ttaaaggttt aatatatata tccaaaccaa atctcatttt taatcaaagc
     2101 acatgttaag agattggaaa ataaagtaaa aaagctgtgg atgtgtagtg cataagaaat
     2161 gagatcatta taaacaactt attttatttg ttgcttagtt ttatttatct gttacactta
     2221 catat
//
LOCUS       XM_071829429             710 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone H3.3 (LOC139839375),
            mRNA.
ACCESSION   XM_071829429
VERSION     XM_071829429.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..710
                     /gene="LOC139839375"
                     /note="histone H3.3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 44 Proteins"
                     /db_xref="GeneID:139839375"
     CDS             78..488
                     /gene="LOC139839375"
                     /codon_start=1
                     /product="histone H3.3"
                     /protein_id="XP_071685530.1"
                     /db_xref="GeneID:139839375"
                     /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRP
                     GTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLV
                     GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
     misc_feature    78..485
                     /gene="LOC139839375"
                     /note="histone H3; Provisional; Region: PTZ00018"
                     /db_xref="CDD:185400"
     misc_feature    order(195..221,225..227,267..278,285..287,294..296,
                     327..338,426..434,438..440)
                     /gene="LOC139839375"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     misc_feature    order(210..212,219..221,228..233,240..245,249..251,
                     255..257,261..266,276..281,285..293,297..302,306..308,
                     312..314,321..335,339..344,351..356,363..371,375..383,
                     387..395,402..404,429..443,453..455,462..464)
                     /gene="LOC139839375"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467036"
     misc_feature    order(222..224,231..236,243..248,252..254,360..362,
                     372..374,381..383,402..404,414..416,429..431)
                     /gene="LOC139839375"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467036"
     misc_feature    order(396..398,405..410,417..422,426..428,444..449,
                     456..461,465..473)
                     /gene="LOC139839375"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:467036"
     polyA_site      710
                     /gene="LOC139839375"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcacgcttaa aactttttcc ccaatctgaa accctaattc ccgatatcaa aaaccagatc
       61 cttaactttg aatttcaatg gctcgtacga agcaaaccgc tcgtaagtcc accggtggaa
      121 aggctccgag gaagcaactc gctaccaagg ctgccaggaa atcagctccg acaaccggag
      181 gagtgaagaa gccccatcgc taccgtcctg gaactgtcgc tctccgtgaa atccgtaagt
      241 accagaaaag tactgaattg ctgatccgca aattgccatt tcagaggctt gttcgtgaaa
      301 ttgcacaaga ttttaagact gatctgaggt tccagagcca tgctgtcttg gcactccagg
      361 aggctgcaga ggcttacctt gttggtctct tcgaggatac caacttgtgt gctattcatg
      421 ccaagagggt tactatcatg cccaaggaca ttcaattggc taggcgtatc cgtggggagc
      481 gtgcttgagt ttggtagtta atgtagtctg cttatgttgt tttgttgaag gtttgtgtag
      541 acttgtgttc tgaacaatgg taatttttta ctagtgtttt gtggtaatgt ttgggggaga
      601 aaacttgaat atgaaccctt taattgtggt atgtaaattg tctactaccg atctgttgtt
      661 ggtggttatt ataagtttgg tatcaatggt aaatgtttgt ttgcgattaa
//
LOCUS       XM_071829430            1419 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139839376), mRNA.
ACCESSION   XM_071829430
VERSION     XM_071829430.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1419
                     /gene="LOC139839376"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839376"
     CDS             1..1419
                     /gene="LOC139839376"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071685531.1"
                     /db_xref="GeneID:139839376"
                     /translation="MSSDSEPDVNMLLSIRNTTTNRALEAIDALDELSDNEEVEQIPR
                     TPRRYLHRDRQGRALALWNYYFSDNPTFPDDYFRNRYRMSKPLFLRICQGILNFSQTP
                     VPKYFSYFIQKRDATGLLGFNIVQKVTSAIRQLAYAASADVFDEYLHMDEQTSYDCLN
                     NFCKCIFHLYGPEYLRRPTAQDVQRLTTKHAQIHSFPGMLGSIDRMHWRWRNCPARWK
                     GHYTRGDHGYPSIMLEAVASYDGWFWHAFFGTARSNNDINVLNQSDLFSELLAGEAPP
                     CTYTVNGCTFTNGYYLADGIYPEWSTIVKSFKNPIDPKQKKFKRYQESARKDIERAFG
                     ILQGRWQIVQRPARPYYIRKIRRILFSCVILNNMITEDNSRAFCGLEENYRPVRRPTR
                     SFQERVEAHMRVDAEIRDAGIHHLLKNMLVEHIHNLPPNYRIRHDPTRNPNNQEDAGS
                     SHIPDDEDEEDHEEDQEDDDEE"
     misc_feature    517..1116
                     /gene="LOC139839376"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagctccg actccgagcc cgacgtaaat atgctattat cgatcagaaa tacgactacg
       61 aatcgagcac tcgaagccat tgacgcgcta gatgaattaa gtgataacga agaagtagaa
      121 caaataccac ggacacctag aagatattta catagagatc gtcagggtcg tgcattggct
      181 ttatggaatt attatttctc cgataatccc acatttccgg acgattattt tcgtaatcgt
      241 tatcgaatga gcaaacctct atttcttcgt atttgtcaag gtatattgaa cttttctcaa
      301 actccggttc ctaaatattt tagttatttt attcaaaaac gtgatgctac cggattactt
      361 ggtttcaata ttgttcaaaa agtaacatct gccatacgtc aactagctta tgccgcttcg
      421 gccgatgttt ttgatgagta tttgcatatg gatgaacaaa cctcatatga ttgtttaaac
      481 aatttttgca aatgtatttt ccacttgtac ggtcccgaat atttgagacg accaactgca
      541 caagatgtgc aacgtttgac cactaaacat gctcaaatac atagttttcc ggggatgtta
      601 ggaagtattg atcgtatgca ttggagatgg agaaattgtc cggcacgttg gaaaggtcat
      661 tatacacgag gtgaccatgg ttacccgtca attatgcttg aagcggtagc atcgtacgat
      721 ggatggtttt ggcacgcgtt ttttggaact gctagatcaa acaatgatat caacgtgcta
      781 aatcaatccg acttgtttag tgagttatta gccggtgaag caccaccatg tacgtatacg
      841 gttaacggat gtacgtttac taatggttat tatttggcgg atggaattta cccggaatgg
      901 tctacaatag ttaagtcgtt caaaaatccg atagacccga aacaaaaaaa attcaaaagg
      961 tatcaagaat cggcaagaaa agatattgaa cgagcatttg gaatactaca aggccgatgg
     1021 caaattgttc aacgtccggc acgaccttat tatatccgca aaattagaag gattttgttt
     1081 tcatgtgtga tattaaataa tatgataacc gaggacaaca gccgtgcatt ttgtggactc
     1141 gaggagaatt atcgtccggt tcgacgacct acgagatcat tccaagaaag ggttgaagcg
     1201 catatgcgag tggacgcgga aataagagat gcgggcattc atcatctact aaaaaatatg
     1261 cttgtagaac acatacataa tcttccacca aattatcgca tacgacatga tccaacaaga
     1321 aatccaaaca accaagaaga cgctggatct tcacacattc ccgatgacga ggatgaagaa
     1381 gatcacgaag aagatcaaga agacgacgat gaagaatag
//
LOCUS       XM_071829431            2127 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X1, mRNA.
ACCESSION   XM_071829431
VERSION     XM_071829431.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2127
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2127
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1515..1973
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685532.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      2127
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcgtggaaaa atgtggtata aagaacagta gcaacaatgt ggagcggtgc ttatcactga
      841 tgagctacaa aaattatctt attgtaataa attcatgcat cttttttaaa acgattccaa
      901 tgtgtagagg aaagaatgca cagattgata agcaacctcg tcagactttc aaaacatgta
      961 agtagtttgt atttgatata tgcaccagct tctggtttta gatatgcaaa cctattaatc
     1021 ctaataatta aacaaaatgt aatgggacat tgagaggtct gtacaccgga ttgttatcac
     1081 gttagatgtt cgacaacaga tcatgtcaat gaatcaaaaa gctcgggaag aataggagca
     1141 tgctgatgtc gaaaaacttc aaagagtgga tgaggcaaca aacatgaggc tcaatgtact
     1201 ctttaggaga tgcataagtg ctcttacacg tggcggacct ggtgaaatgc caaggccaat
     1261 tgaagtacat gctcatgatc cactacgtta tgtttctaat attctcgatt ggctacttcg
     1321 ggttcatgtt tatcgatgtt gctgattgtg tatgttttgg gttatattcc catcaactgc
     1381 aactctgatt atatggtact caaggtatgc tgacaaaatg aaattttatt tggagggcat
     1441 gcatctcatg gagctggaaa tatatattgg ttatctgaag tcaaagaaaa atcagatttt
     1501 ggtgaatata aattatggaa aattccgaaa tcgaagagag tttgtttgct cttggtgaac
     1561 caaagttaca tggagaaatg tgcaaaacgc tcgctctgat ttatgtcaaa gtcttgagca
     1621 tttttctgga gctagaaaat gctcgtccac gtagcacttc agggattcaa gcattatgtt
     1681 cattgcatat agcgttagag aaagaaaaga tggctattca acattgtgct gaatgtagaa
     1741 aaatttactt ggatataacg gggaactcag ttgtattgaa atttgagaag gcgagatcag
     1801 ctcttgaaga tggtcttaaa agggttgaag agatagttcc cacaaactat aggatgtcag
     1861 gtacatataa gcaagttttc tgcagaaggt ttttattgga ggttgcaaat tgggccggtc
     1921 gcaagggctg gttagtgtct agaatgtgtt tttttatata cgggtccaaa taggccattc
     1981 atgctggttg aaacacttcc gtcaaaaagt ttgtagttta attttttttt ttaataatat
     2041 agcatttgaa atgtaataat tgaggtttta tgtaagaatc gacccattta taagaataca
     2101 gaaggcaatt gctactgcta attatca
//
LOCUS       XM_071829432            2315 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X2, mRNA.
ACCESSION   XM_071829432
VERSION     XM_071829432.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2315
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1703..2161
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685533.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      2315
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcaacaatta aattatctac attttctttc ataattaata tcaatccgat aatatactcc
       61 cttccgttca agctaaagga ttcaaatcta ttatcatcta atagactacc ctcctgttag
      121 catttttcac tgcttttttt tgctgaacgt gatattagtg ttttgaaata tatacactca
      181 cgatgcaatt attcaatggt aacatggtta caatctgttg caaccttcaa tcttgattct
      241 taaacgattt caaccttcaa ttatcaattt gtcgggtttt aaactggtgg ttgtcggtga
      301 ggatcaaatg cagcaagttt cgatcaaatg cagcaagttt ctggaggtta caaacctggt
      361 atgcatattg ttttacctgc tttttttctt catactgtta tgaattcttt gttagtatct
      421 gtttatttga ctgtctgatg tgttttgtac ttaacttgtt gctcttgcct cttataattg
      481 atttttatgt atgttctttt ggtttaactt cattgcttta tacaattgta tgctactttg
      541 tgcagaataa tggtaagatg tttttgttgt tatgagagct tattctcatc tgccctattt
      601 ttgcgcagag gtaacatcta atgtttttgt tgttgaagat caggcacaac aagtgtctat
      661 acctgataac aatgatgtag ttattagttc tgttgatagg ttcatataat tcacatcatc
      721 ccatgatcat acatcatctg attcccatca acgattcatc tttaattagg gtttgaaact
      781 tggtttacca tgctttctag ggtttcaaac gaataatctt cgtcagatcg aggcggatga
      841 gatcggtgag cctcgctttg tgttctttat tgtagctgtg ttcagcacta ttgaattggt
      901 gacacgcata gatggtttgc catgttccca aacactcaaa ttgttagtag tagcaacaat
      961 cgatttacag ctggaaaaat gtggtataaa gaacagtagc aacaatgtgg agcggtgctt
     1021 atcactgatg agctacaaaa attatcttat tgtaataaat tcatgcatct tttttaaaac
     1081 gattccaatg tgtagaggaa agaatgcaca gattgataag caacctcgtc agactttcaa
     1141 aacatgtaag tagtttgtat ttgatatatg caccagcttc tggttttaga tatgcaaacc
     1201 tattaatcct aataattaaa caaaatgtaa tgggacattg agaggtctgt acaccggatt
     1261 gttatcacgt tagatgttcg acaacagatc atgtcaatga atcaaaaagc tcgggaagaa
     1321 taggagcatg ctgatgtcga aaaacttcaa agagtggatg aggcaacaaa catgaggctc
     1381 aatgtactct ttaggagatg cataagtgct cttacacgtg gcggacctgg tgaaatgcca
     1441 aggccaattg aagtacatgc tcatgatcca ctacgttatg tttctaatat tctcgattgg
     1501 ctacttcggg ttcatgttta tcgatgttgc tgattgtgta tgttttgggt tatattccca
     1561 tcaactgcaa ctctgattat atggtactca aggtatgctg acaaaatgaa attttatttg
     1621 gagggcatgc atctcatgga gctggaaata tatattggtt atctgaagtc aaagaaaaat
     1681 cagattttgg tgaatataaa ttatggaaaa ttccgaaatc gaagagagtt tgtttgctct
     1741 tggtgaacca aagttacatg gagaaatgtg caaaacgctc gctctgattt atgtcaaagt
     1801 cttgagcatt tttctggagc tagaaaatgc tcgtccacgt agcacttcag ggattcaagc
     1861 attatgttca ttgcatatag cgttagagaa agaaaagatg gctattcaac attgtgctga
     1921 atgtagaaaa atttacttgg atataacggg gaactcagtt gtattgaaat ttgagaaggc
     1981 gagatcagct cttgaagatg gtcttaaaag ggttgaagag atagttccca caaactatag
     2041 gatgtcaggt acatataagc aagttttctg cagaaggttt ttattggagg ttgcaaattg
     2101 ggccggtcgc aagggctggt tagtgtctag aatgtgtttt tttatatacg ggtccaaata
     2161 ggccattcat gctggttgaa acacttccgt caaaaagttt gtagtttaat tttttttttt
     2221 aataatatag catttgaaat gtaataattg aggttttatg taagaatcga cccatttata
     2281 agaatacaga aggcaattgc tactgctaat tatca
//
LOCUS       XM_071829433            2239 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X3, mRNA.
ACCESSION   XM_071829433
VERSION     XM_071829433.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2239
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1627..2085
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685534.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      2239
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 catgtaagta gtttgtattt gatatatgca ccagcttctg gttttagata tgcaaaccta
     1141 ttaatcctaa taattaaaca aaatgtaatg ggacattgag aggtctgtac accggattgt
     1201 tatcacgtta gatgttcgac aacagatcat gtcaatgaat caaaaagctc gggaagaata
     1261 ggagcatgct gatgtcgaaa aacttcaaag agtggatgag gcaacaaaca tgaggctcaa
     1321 tgtactcttt aggagatgca taagtgctct tacacgtggc ggacctggtg aaatgccaag
     1381 gccaattgaa gtacatgctc atgatccact acgttatgtt tctaatattc tcgattggct
     1441 acttcggatg ttgctgattg tgtatgtttt gggttatatt cccatcaact gcaactctga
     1501 ttatatggta ctcaaggtat gctgacaaaa tgaaatttta tttggagggc atgcatctca
     1561 tggagctgga aatatatatt ggttatctga agtcaaagaa aaatcagatt ttggtgaata
     1621 taaattatgg aaaattccga aatcgaagag agtttgtttg ctcttggtga accaaagtta
     1681 catggagaaa tgtgcaaaac gctcgctctg atttatgtca aagtcttgag catttttctg
     1741 gagctagaaa atgctcgtcc acgtagcact tcagggattc aagcattatg ttcattgcat
     1801 atagcgttag agaaagaaaa gatggctatt caacattgtg ctgaatgtag aaaaatttac
     1861 ttggatataa cggggaactc agttgtattg aaatttgaga aggcgagatc agctcttgaa
     1921 gatggtctta aaagggttga agagatagtt cccacaaact ataggatgtc aggtacatat
     1981 aagcaagttt tctgcagaag gtttttattg gaggttgcaa attgggccgg tcgcaagggc
     2041 tggttagtgt ctagaatgtg tttttttata tacgggtcca aataggccat tcatgctggt
     2101 tgaaacactt ccgtcaaaaa gtttgtagtt taattttttt ttttaataat atagcatttg
     2161 aaatgtaata attgaggttt tatgtaagaa tcgacccatt tataagaata cagaaggcaa
     2221 ttgctactgc taattatca
//
LOCUS       XM_071829434            1640 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X4, mRNA.
ACCESSION   XM_071829434
VERSION     XM_071829434.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1640
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1028..1486
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685535.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      1640
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctgtgga
      301 aaaatgtggt ataaagaaca gtagcaacaa tgtggagcgg tgcttatcac tgatgagcta
      361 caaaaattat cttattgtaa taaattcatg catctttttt aaaacgattc caatgtgtag
      421 aggaaagaat gcacagattg ataagcaacc tcgtcagact ttcaaaacat gtaagtagtt
      481 tgtatttgat atatgcacca gcttctggtt ttagatatgc aaacctatta atcctaataa
      541 ttaaacaaaa tgtaatggga cattgagagg tctgtacacc ggattgttat cacgttagat
      601 gttcgacaac agatcatgtc aatgaatcaa aaagctcggg aagaatagga gcatgctgat
      661 gtcgaaaaac ttcaaagagt ggatgaggca acaaacatga ggctcaatgt actctttagg
      721 agatgcataa gtgctcttac acgtggcgga cctggtgaaa tgccaaggcc aattgaagta
      781 catgctcatg atccactacg ttatgtttct aatattctcg attggctact tcgggttcat
      841 gtttatcgat gttgctgatt gtgtatgttt tgggttatat tcccatcaac tgcaactctg
      901 attatatggt actcaaggta tgctgacaaa atgaaatttt atttggaggg catgcatctc
      961 atggagctgg aaatatatat tggttatctg aagtcaaaga aaaatcagat tttggtgaat
     1021 ataaattatg gaaaattccg aaatcgaaga gagtttgttt gctcttggtg aaccaaagtt
     1081 acatggagaa atgtgcaaaa cgctcgctct gatttatgtc aaagtcttga gcatttttct
     1141 ggagctagaa aatgctcgtc cacgtagcac ttcagggatt caagcattat gttcattgca
     1201 tatagcgtta gagaaagaaa agatggctat tcaacattgt gctgaatgta gaaaaattta
     1261 cttggatata acggggaact cagttgtatt gaaatttgag aaggcgagat cagctcttga
     1321 agatggtctt aaaagggttg aagagatagt tcccacaaac tataggatgt caggtacata
     1381 taagcaagtt ttctgcagaa ggtttttatt ggaggttgca aattgggccg gtcgcaaggg
     1441 ctggttagtg tctagaatgt gtttttttat atacgggtcc aaataggcca ttcatgctgg
     1501 ttgaaacact tccgtcaaaa agtttgtagt ttaatttttt tttttaataa tatagcattt
     1561 gaaatgtaat aattgaggtt ttatgtaaga atcgacccat ttataagaat acagaaggca
     1621 attgctactg ctaattatca
//
LOCUS       XM_071829435            1702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X5, mRNA.
ACCESSION   XM_071829435
VERSION     XM_071829435.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1702
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1090..1548
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685536.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      1702
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcaacaatta aattatctac attttctttc ataattaata tcaatccgat aatatactcc
       61 cttccgttca agctaaagga ttcaaatcta ttatcatcta atagactacc ctcctgttag
      121 catttttcac tgcttttttt tgctgaacgt gatattagtg ttttgaaata tatacactca
      181 cgatgcaatt attcaatggt aacatggtta caatctgttg caaccttcaa tcttgattct
      241 taaacgattt caaccttcaa ttatcaattt gtcgggtttt aaactggtgg ttgtcggtga
      301 ggatcaaatg cagcaagttt cgatcaaatg cagcaagttt ctggaggtta caaacctgtg
      361 gaaaaatgtg gtataaagaa cagtagcaac aatgtggagc ggtgcttatc actgatgagc
      421 tacaaaaatt atcttattgt aataaattca tgcatctttt ttaaaacgat tccaatgtgt
      481 agaggaaaga atgcacagat tgataagcaa cctcgtcaga ctttcaaaac atgtaagtag
      541 tttgtatttg atatatgcac cagcttctgg ttttagatat gcaaacctat taatcctaat
      601 aattaaacaa aatgtaatgg gacattgaga ggtctgtaca ccggattgtt atcacgttag
      661 atgttcgaca acagatcatg tcaatgaatc aaaaagctcg ggaagaatag gagcatgctg
      721 atgtcgaaaa acttcaaaga gtggatgagg caacaaacat gaggctcaat gtactcttta
      781 ggagatgcat aagtgctctt acacgtggcg gacctggtga aatgccaagg ccaattgaag
      841 tacatgctca tgatccacta cgttatgttt ctaatattct cgattggcta cttcgggttc
      901 atgtttatcg atgttgctga ttgtgtatgt tttgggttat attcccatca actgcaactc
      961 tgattatatg gtactcaagg tatgctgaca aaatgaaatt ttatttggag ggcatgcatc
     1021 tcatggagct ggaaatatat attggttatc tgaagtcaaa gaaaaatcag attttggtga
     1081 atataaatta tggaaaattc cgaaatcgaa gagagtttgt ttgctcttgg tgaaccaaag
     1141 ttacatggag aaatgtgcaa aacgctcgct ctgatttatg tcaaagtctt gagcattttt
     1201 ctggagctag aaaatgctcg tccacgtagc acttcaggga ttcaagcatt atgttcattg
     1261 catatagcgt tagagaaaga aaagatggct attcaacatt gtgctgaatg tagaaaaatt
     1321 tacttggata taacggggaa ctcagttgta ttgaaatttg agaaggcgag atcagctctt
     1381 gaagatggtc ttaaaagggt tgaagagata gttcccacaa actataggat gtcaggtaca
     1441 tataagcaag ttttctgcag aaggttttta ttggaggttg caaattgggc cggtcgcaag
     1501 ggctggttag tgtctagaat gtgttttttt atatacgggt ccaaataggc cattcatgct
     1561 ggttgaaaca cttccgtcaa aaagtttgta gtttaatttt tttttttaat aatatagcat
     1621 ttgaaatgta ataattgagg ttttatgtaa gaatcgaccc atttataaga atacagaagg
     1681 caattgctac tgctaattat ca
//
LOCUS       XM_071829436            1720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X6, mRNA.
ACCESSION   XM_071829436
VERSION     XM_071829436.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1720
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1108..1566
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685537.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      1720
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcaacaatta aattatctac attttctttc ataattaata tcaatccgat aatatactcc
       61 cttccgttca agctaaagga ttcaaatcta ttatcatcta atagactacc ctcctgttag
      121 catttttcac tgcttttttt tgctgaacgt gatattagtg ttttgaaata tatacactca
      181 cgatgcaatt attcaatggt aacatggtta caatctgttg caaccttcaa tcttgattct
      241 taaacgattt caaccttcaa ttatcaattt gtcgggtaac cgggtacgtt catagtttaa
      301 actggtggtt gtcggtgagg atcaaatgca gcaagtttcg atcaaatgca gcaagtttct
      361 ggaggttaca aacctgtgga aaaatgtggt ataaagaaca gtagcaacaa tgtggagcgg
      421 tgcttatcac tgatgagcta caaaaattat cttattgtaa taaattcatg catctttttt
      481 aaaacgattc caatgtgtag aggaaagaat gcacagattg ataagcaacc tcgtcagact
      541 ttcaaaacat gtaagtagtt tgtatttgat atatgcacca gcttctggtt ttagatatgc
      601 aaacctatta atcctaataa ttaaacaaaa tgtaatggga cattgagagg tctgtacacc
      661 ggattgttat cacgttagat gttcgacaac agatcatgtc aatgaatcaa aaagctcggg
      721 aagaatagga gcatgctgat gtcgaaaaac ttcaaagagt ggatgaggca acaaacatga
      781 ggctcaatgt actctttagg agatgcataa gtgctcttac acgtggcgga cctggtgaaa
      841 tgccaaggcc aattgaagta catgctcatg atccactacg ttatgtttct aatattctcg
      901 attggctact tcgggttcat gtttatcgat gttgctgatt gtgtatgttt tgggttatat
      961 tcccatcaac tgcaactctg attatatggt actcaaggta tgctgacaaa atgaaatttt
     1021 atttggaggg catgcatctc atggagctgg aaatatatat tggttatctg aagtcaaaga
     1081 aaaatcagat tttggtgaat ataaattatg gaaaattccg aaatcgaaga gagtttgttt
     1141 gctcttggtg aaccaaagtt acatggagaa atgtgcaaaa cgctcgctct gatttatgtc
     1201 aaagtcttga gcatttttct ggagctagaa aatgctcgtc cacgtagcac ttcagggatt
     1261 caagcattat gttcattgca tatagcgtta gagaaagaaa agatggctat tcaacattgt
     1321 gctgaatgta gaaaaattta cttggatata acggggaact cagttgtatt gaaatttgag
     1381 aaggcgagat cagctcttga agatggtctt aaaagggttg aagagatagt tcccacaaac
     1441 tataggatgt caggtacata taagcaagtt ttctgcagaa ggtttttatt ggaggttgca
     1501 aattgggccg gtcgcaaggg ctggttagtg tctagaatgt gtttttttat atacgggtcc
     1561 aaataggcca ttcatgctgg ttgaaacact tccgtcaaaa agtttgtagt ttaatttttt
     1621 tttttaataa tatagcattt gaaatgtaat aattgaggtt ttatgtaaga atcgacccat
     1681 ttataagaat acagaaggca attgctactg ctaattatca
//
LOCUS       XM_071829437            2182 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X7, mRNA.
ACCESSION   XM_071829437
VERSION     XM_071829437.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2182
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1570..2028
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685538.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      2182
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 catgtaagta gtttgtattt gatatatgca ccagcttctg gttttagata tgcaaaccta
     1141 ttaatcctaa taattaaaca aaatgtaatg ggacattgag aggtctgtac accggattgt
     1201 tatcacgtta gatgttcgac aacagatcat gtcaatgaat caaaaagctc gggaagaata
     1261 ggagcatgct gatgtcgaaa aacttcaaag agtggatgag gcaacaaaca tgaggctcaa
     1321 tgtactcttt aggagatgca taagtgctct tacacgtggc ggacctggtg aaatgccaag
     1381 gccaattgaa atgttgctga ttgtgtatgt tttgggttat attcccatca actgcaactc
     1441 tgattatatg gtactcaagg tatgctgaca aaatgaaatt ttatttggag ggcatgcatc
     1501 tcatggagct ggaaatatat attggttatc tgaagtcaaa gaaaaatcag attttggtga
     1561 atataaatta tggaaaattc cgaaatcgaa gagagtttgt ttgctcttgg tgaaccaaag
     1621 ttacatggag aaatgtgcaa aacgctcgct ctgatttatg tcaaagtctt gagcattttt
     1681 ctggagctag aaaatgctcg tccacgtagc acttcaggga ttcaagcatt atgttcattg
     1741 catatagcgt tagagaaaga aaagatggct attcaacatt gtgctgaatg tagaaaaatt
     1801 tacttggata taacggggaa ctcagttgta ttgaaatttg agaaggcgag atcagctctt
     1861 gaagatggtc ttaaaagggt tgaagagata gttcccacaa actataggat gtcaggtaca
     1921 tataagcaag ttttctgcag aaggttttta ttggaggttg caaattgggc cggtcgcaag
     1981 ggctggttag tgtctagaat gtgttttttt atatacgggt ccaaataggc cattcatgct
     2041 ggttgaaaca cttccgtcaa aaagtttgta gtttaatttt tttttttaat aatatagcat
     2101 ttgaaatgta ataattgagg ttttatgtaa gaatcgaccc atttataaga atacagaagg
     2161 caattgctac tgctaattat ca
//
LOCUS       XM_071829438            2125 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X8, mRNA.
ACCESSION   XM_071829438
VERSION     XM_071829438.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2125
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1513..1971
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685539.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      2125
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 catatgttcg acaacagatc atgtcaatga atcaaaaagc tcgggaagaa taggagcatg
     1141 ctgatgtcga aaaacttcaa agagtggatg aggcaacaaa catgaggctc aatgtactct
     1201 ttaggagatg cataagtgct cttacacgtg gcggacctgg tgaaatgcca aggccaattg
     1261 aagtacatgc tcatgatcca ctacgttatg tttctaatat tctcgattgg ctacttcggg
     1321 ttcatgttta tcgatgttgc tgattgtgta tgttttgggt tatattccca tcaactgcaa
     1381 ctctgattat atggtactca aggtatgctg acaaaatgaa attttatttg gagggcatgc
     1441 atctcatgga gctggaaata tatattggtt atctgaagtc aaagaaaaat cagattttgg
     1501 tgaatataaa ttatggaaaa ttccgaaatc gaagagagtt tgtttgctct tggtgaacca
     1561 aagttacatg gagaaatgtg caaaacgctc gctctgattt atgtcaaagt cttgagcatt
     1621 tttctggagc tagaaaatgc tcgtccacgt agcacttcag ggattcaagc attatgttca
     1681 ttgcatatag cgttagagaa agaaaagatg gctattcaac attgtgctga atgtagaaaa
     1741 atttacttgg atataacggg gaactcagtt gtattgaaat ttgagaaggc gagatcagct
     1801 cttgaagatg gtcttaaaag ggttgaagag atagttccca caaactatag gatgtcaggt
     1861 acatataagc aagttttctg cagaaggttt ttattggagg ttgcaaattg ggccggtcgc
     1921 aagggctggt tagtgtctag aatgtgtttt tttatatacg ggtccaaata ggccattcat
     1981 gctggttgaa acacttccgt caaaaagttt gtagtttaat tttttttttt aataatatag
     2041 catttgaaat gtaataattg aggttttatg taagaatcga cccatttata agaatacaga
     2101 aggcaattgc tactgctaat tatca
//
LOCUS       XM_071829439            2156 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X9, mRNA.
ACCESSION   XM_071829439
VERSION     XM_071829439.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2156
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1544..2002
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685540.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      2156
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 cataggtctg tacaccggat tgttatcacg ttagatgttc gacaacagat catgtcaatg
     1141 aatcaaaaag ctcgggaaga ataggagcat gctgatgtcg aaaaacttca aagagtggat
     1201 gaggcaacaa acatgaggct caatgtactc tttaggagat gcataagtgc tcttacacgt
     1261 ggcggacctg gtgaaatgcc aaggccaatt gaagtacatg ctcatgatcc actacgttat
     1321 gtttctaata ttctcgattg gctacttcgg gttcatgttt atcgatgttg ctgattgtgt
     1381 atgttttggg ttatattccc atcaactgca actctgatta tatggtactc aaggtatgct
     1441 gacaaaatga aattttattt ggagggcatg catctcatgg agctggaaat atatattggt
     1501 tatctgaagt caaagaaaaa tcagattttg gtgaatataa attatggaaa attccgaaat
     1561 cgaagagagt ttgtttgctc ttggtgaacc aaagttacat ggagaaatgt gcaaaacgct
     1621 cgctctgatt tatgtcaaag tcttgagcat ttttctggag ctagaaaatg ctcgtccacg
     1681 tagcacttca gggattcaag cattatgttc attgcatata gcgttagaga aagaaaagat
     1741 ggctattcaa cattgtgctg aatgtagaaa aatttacttg gatataacgg ggaactcagt
     1801 tgtattgaaa tttgagaagg cgagatcagc tcttgaagat ggtcttaaaa gggttgaaga
     1861 gatagttccc acaaactata ggatgtcagg tacatataag caagttttct gcagaaggtt
     1921 tttattggag gttgcaaatt gggccggtcg caagggctgg ttagtgtcta gaatgtgttt
     1981 ttttatatac gggtccaaat aggccattca tgctggttga aacacttccg tcaaaaagtt
     2041 tgtagtttaa tttttttttt taataatata gcatttgaaa tgtaataatt gaggttttat
     2101 gtaagaatcg acccatttat aagaatacag aaggcaattg ctactgctaa ttatca
//
LOCUS       XM_071829440            2111 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X10, mRNA.
ACCESSION   XM_071829440
VERSION     XM_071829440.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2111
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1499..1957
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X1"
                     /protein_id="XP_071685541.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGTYKQVFCRRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      2111
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 catatcatgt caatgaatca aaaagctcgg gaagaatagg agcatgctga tgtcgaaaaa
     1141 cttcaaagag tggatgaggc aacaaacatg aggctcaatg tactctttag gagatgcata
     1201 agtgctctta cacgtggcgg acctggtgaa atgccaaggc caattgaagt acatgctcat
     1261 gatccactac gttatgtttc taatattctc gattggctac ttcgggttca tgtttatcga
     1321 tgttgctgat tgtgtatgtt ttgggttata ttcccatcaa ctgcaactct gattatatgg
     1381 tactcaaggt atgctgacaa aatgaaattt tatttggagg gcatgcatct catggagctg
     1441 gaaatatata ttggttatct gaagtcaaag aaaaatcaga ttttggtgaa tataaattat
     1501 ggaaaattcc gaaatcgaag agagtttgtt tgctcttggt gaaccaaagt tacatggaga
     1561 aatgtgcaaa acgctcgctc tgatttatgt caaagtcttg agcatttttc tggagctaga
     1621 aaatgctcgt ccacgtagca cttcagggat tcaagcatta tgttcattgc atatagcgtt
     1681 agagaaagaa aagatggcta ttcaacattg tgctgaatgt agaaaaattt acttggatat
     1741 aacggggaac tcagttgtat tgaaatttga gaaggcgaga tcagctcttg aagatggtct
     1801 taaaagggtt gaagagatag ttcccacaaa ctataggatg tcaggtacat ataagcaagt
     1861 tttctgcaga aggtttttat tggaggttgc aaattgggcc ggtcgcaagg gctggttagt
     1921 gtctagaatg tgttttttta tatacgggtc caaataggcc attcatgctg gttgaaacac
     1981 ttccgtcaaa aagtttgtag tttaattttt ttttttaata atatagcatt tgaaatgtaa
     2041 taattgaggt tttatgtaag aatcgaccca tttataagaa tacagaaggc aattgctact
     2101 gctaattatc a
//
LOCUS       XM_071829441            2263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X11, mRNA.
ACCESSION   XM_071829441
VERSION     XM_071829441.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2263
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1714..2109
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X2"
                     /protein_id="XP_071685542.1"
                     /db_xref="GeneID:139839377"
                     /translation="MCKTLALIYVKVLSIFLELENARPRSTSGIQALCSLHIALEKEK
                     MAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLKRVEEIVPTNYRMSGTYKQVFC
                     RRFLLEVANWAGRKGWLVSRMCFFIYGSK"
     polyA_site      2263
                     /gene="LOC139839377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 catgtaagta gtttgtattt gatatatgca ccagcttctg gttttagata tgcaaaccta
     1141 ttaatcctaa taattaaaca aaatgtaatg ggacattgag aggtctgtac accggattgt
     1201 tatcacgtta gatgttcgac aacagatcat gtcaatgaat caaaaagctc gggaagaata
     1261 ggagcatgct gatgtcgaaa aacttcaaag agtggatgag gcaacaaaca tgaggctcaa
     1321 tgtactcttt aggagatgca taagtgctct tacacgtggc ggacctggtg aaatgccaag
     1381 gccaattgaa gtacatgctc atgatccact acgttatgtt tctaatattc tcgattggct
     1441 acttcgggtt catgtttatc gatgttgctg attgtgtatg ttttgggtta tattcccatc
     1501 aactgcaact ctgattatat ggtactcaag gtatgctgac aaaatgaaat tttatttgga
     1561 gggcatgcat ctcatggagc tggaaatata tattggttat ctgaagtcaa agaaaaatca
     1621 gattttggtg aatataaatt atggaaaatt ccgaaatcga agagagtttg tttgctcttg
     1681 gtgaaccaaa ggtcaataca gttacatgga gaaatgtgca aaacgctcgc tctgatttat
     1741 gtcaaagtct tgagcatttt tctggagcta gaaaatgctc gtccacgtag cacttcaggg
     1801 attcaagcat tatgttcatt gcatatagcg ttagagaaag aaaagatggc tattcaacat
     1861 tgtgctgaat gtagaaaaat ttacttggat ataacgggga actcagttgt attgaaattt
     1921 gagaaggcga gatcagctct tgaagatggt cttaaaaggg ttgaagagat agttcccaca
     1981 aactatagga tgtcaggtac atataagcaa gttttctgca gaaggttttt attggaggtt
     2041 gcaaattggg ccggtcgcaa gggctggtta gtgtctagaa tgtgtttttt tatatacggg
     2101 tccaaatagg ccattcatgc tggttgaaac acttccgtca aaaagtttgt agtttaattt
     2161 ttttttttaa taatatagca tttgaaatgt aataattgag gttttatgta agaatcgacc
     2221 catttataag aatacagaag gcaattgcta ctgctaatta tca
//
LOCUS       XM_071829442            2030 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X12, mRNA.
ACCESSION   XM_071829442
VERSION     XM_071829442.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2030
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1641..2015
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X3"
                     /protein_id="XP_071685543.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSGCLWSIGSS"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 catgtaagta gtttgtattt gatatatgca ccagcttctg gttttagata tgcaaaccta
     1141 ttaatcctaa taattaaaca aaatgtaatg ggacattgag aggtctgtac accggattgt
     1201 tatcacgtta gatgttcgac aacagatcat gtcaatgaat caaaaagctc gggaagaata
     1261 ggagcatgct gatgtcgaaa aacttcaaag agtggatgag gcaacaaaca tgaggctcaa
     1321 tgtactcttt aggagatgca taagtgctct tacacgtggc ggacctggtg aaatgccaag
     1381 gccaattgaa gtacatgctc atgatccact acgttatgtt tctaatattc tcgattggct
     1441 acttcgggtt catgtttatc gatgttgctg attgtgtatg ttttgggtta tattcccatc
     1501 aactgcaact ctgattatat ggtactcaag gtatgctgac aaaatgaaat tttatttgga
     1561 gggcatgcat ctcatggagc tggaaatata tattggttat ctgaagtcaa agaaaaatca
     1621 gattttggtg aatataaatt atggaaaatt ccgaaatcga agagagtttg tttgctcttg
     1681 gtgaaccaaa gttacatgga gaaatgtgca aaacgctcgc tctgatttat gtcaaagtct
     1741 tgagcatttt tctggagcta gaaaatgctc gtccacgtag cacttcaggg attcaagcat
     1801 tatgttcatt gcatatagcg ttagagaaag aaaagatggc tattcaacat tgtgctgaat
     1861 gtagaaaaat ttacttggat ataacgggga actcagttgt attgaaattt gagaaggcga
     1921 gatcagctct tgaagatggt cttaaaaggg ttgaagagat agttcccaca aactatagga
     1981 tgtcaggttg tttatggagt attggttcaa gttaaatatg caattggtac
//
LOCUS       XM_071829443            2523 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X13, mRNA.
ACCESSION   XM_071829443
VERSION     XM_071829443.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2523
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     CDS             1640..1993
                     /gene="LOC139839377"
                     /codon_start=1
                     /product="U-box domain-containing protein 6-like isoform
                     X4"
                     /protein_id="XP_071685544.1"
                     /db_xref="GeneID:139839377"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSIFLELENAR
                     PRSTSGIQALCSLHIALEKEKMAIQHCAECRKIYLDITGNSVVLKFEKARSALEDGLK
                     RVEEIVPTNYRMSVK"
ORIGIN      
        1 tcaatttttc ctatttctat atgatatagc atatttgatt cttattattt tgaactcgat
       61 tattttactg atatatggat aagaatataa gaaaaagatt aattggtttt gatttaattt
      121 gaatttgaaa attgattatg gttcgttcaa aggtaaaatt aattgtgctt tcagcaataa
      181 taatcgatta aaatagaacc gggtacgttc atagtttaaa ctggtggttg tcggtgagga
      241 tcaaatgcag caagtttcga tcaaatgcag caagtttctg gaggttacaa acctggtatg
      301 catattgttt tacctgcttt ttttcttcat actgttatga attctttgtt agtatctgtt
      361 tatttgactg tctgatgtgt tttgtactta acttgttgct cttgcctctt ataattgatt
      421 tttatgtatg ttcttttggt ttaacttcat tgctttatac aattgtatgc tactttgtgc
      481 agaataatgg taagatgttt ttgttgttat gagagcttat tctcatctgc cctatttttg
      541 cgcagaggta acatctaatg tttttgttgt tgaagatcag gcacaacaag tgtctatacc
      601 tgataacaat gatgtagtta ttagttctgt tgataggttc atataattca catcatccca
      661 tgatcataca tcatctgatt cccatcaacg attcatcttt aattagggtt tgaaacttgg
      721 tttaccatgc tttctagggt ttcaaacgaa taatcttcgt cagatcgagg cggatgagat
      781 cggtgagcct cgctttgtgt tctttattgt agctgtgttc agcactattg aattggtgac
      841 acgcatagat ggtttgccat gttcccaaac actcaaattg ttagtagtag caacaatcga
      901 tttacagctg gaaaaatgtg gtataaagaa cagtagcaac aatgtggagc ggtgcttatc
      961 actgatgagc tacaaaaatt atcttattgt aataaattca tgcatctttt ttaaaacgat
     1021 tccaatgtgt agaggaaaga atgcacagat tgataagcaa cctcgtcaga ctttcaaaac
     1081 atgtaagtag tttgtatttg atatatgcac cagcttctgg ttttagatat gcaaacctat
     1141 taatcctaat aattaaacaa aatgtaatgg gacattgaga ggtctgtaca ccggattgtt
     1201 atcacgttag atgttcgaca acagatcatg tcaatgaatc aaaaagctcg ggaagaatag
     1261 gagcatgctg atgtcgaaaa acttcaaaga gtggatgagg caacaaacat gaggctcaat
     1321 gtactcttta ggagatgcat aagtgctctt acacgtggcg gacctggtga aatgccaagg
     1381 ccaattgaag tacatgctca tgatccacta cgttatgttt ctaatattct cgattggcta
     1441 cttcgggttc atgtttatcg atgttgctga ttgtgtatgt tttgggttat attcccatca
     1501 actgcaactc tgattatatg gtactcaagg tatgctgaca aaatgaaatt ttatttggag
     1561 ggcatgcatc tcatggagct ggaaatatat attggttatc tgaagtcaaa gaaaaatcag
     1621 attttggtga atataaatta tggaaaattc cgaaatcgaa gagagtttgt ttgctcttgg
     1681 tgaaccaaag ttacatggag aaatgtgcaa aacgctcgct ctgatttatg tcaaagtctt
     1741 gagcattttt ctggagctag aaaatgctcg tccacgtagc acttcaggga ttcaagcatt
     1801 atgttcattg catatagcgt tagagaaaga aaagatggct attcaacatt gtgctgaatg
     1861 tagaaaaatt tacttggata taacggggaa ctcagttgta ttgaaatttg agaaggcgag
     1921 atcagctctt gaagatggtc ttaaaagggt tgaagagata gttcccacaa actataggat
     1981 gtcagtgaaa taaggttgga gaaaacaatt ggagaaaaca ccggttgcag tctgaacaaa
     2041 ccaaaacctt gtattgaagc ggaagacaac aaaggaggac tgtgttatac aatgaagatg
     2101 tacactgccc tattaatttt gtttggggtt aaagatgtaa tgagttttat tatatgatga
     2161 agttttagaa ctctaaaagt gtaatatatg aagttgataa gtaagaactt tgaactttac
     2221 gactcaaatg gagcagaaca gcttacataa gtgataagtt tatattatat atatatctga
     2281 tctttgaagg tatgtgttag aaataacact ttcatgggtc agtttgttat aatggttgta
     2341 taaagtgaag gaccaagctg aaatttgtgc aagagctttt agtaaagaga tggtggatca
     2401 caagatgata cactttgtat aatgtagggt tgaacctttg gaattagtta aatagaattc
     2461 aatagcaacg tttagtgaag ttaccgatca aatgggtcaa aatgtagttg tacttatttt
     2521 aca
//
LOCUS       XR_011756933            2510 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X14, misc_RNA.
ACCESSION   XR_011756933
VERSION     XR_011756933.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2510
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     misc_RNA        1..2510
                     /gene="LOC139839377"
                     /product="U-box domain-containing protein 6-like,
                     transcript variant X14"
                     /db_xref="GeneID:139839377"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 catgtaagta gtttgtattt gatatatgca ccagcttctg gttttagata tgcaaaccta
     1141 ttaatcctaa taattaaaca aaatgtaatg ggacattgag aggtctgtac accggattgt
     1201 tatcacgtta gatgttcgac aacagatcat gtcaatgaat caaaaagctc gggaagaata
     1261 ggagcatgct gatgtcgaaa aacttcaaag agtggatgag gcaacaaaca tgaggctcaa
     1321 tgtactcttt aggagatgca taagtgctct tacacgtggc ggacctggtg aaatgccaag
     1381 gccaattgaa gtacatgctc atgatccact acgttatgtt tctaatattc tcgattggct
     1441 acttcgggtt catgtttatc gatgttgctg attgtgtatg ttttgggtta tattcccatc
     1501 aactgcaact ctgattatat ggtactcaag gtatgctgac aaaatgaaat tttatttgga
     1561 gggcatgcat ctcatggagc tggaaatata tattggttat ctgaagtcaa agaaaaatca
     1621 gattttggtg aatataaatt atggaaaatt ccgaaatcga agagagtttg tttgctcttg
     1681 gtgaaccaaa gttacatgga gaaatgtgca aaacgctcgc tctgatttat gtcaaagtct
     1741 tgagcatttt tctggagcta gaaaatgctc gtccacgtag cacttcaggg attcaagcat
     1801 tatgttcatt gcatatagcg ttagagaaag aaaagatggc tattcaacat tgtgctgaat
     1861 gatataacgg ggaactcagt tgtattgaaa tttgagaagg cgagatcagc tcttgaagat
     1921 ggtcttaaaa gggttgaaga gatagttccc acaaactata ggatgtcagt gaaataaggt
     1981 tggagaaaac aattggagaa aacaccggtt gcagtctgaa caaaccaaaa ccttgtattg
     2041 aagcggaaga caacaaagga ggactgtgtt atacaatgaa gatgtacact gccctattaa
     2101 ttttgtttgg ggttaaagat gtaatgagtt ttattatatg atgaagtttt agaactctaa
     2161 aagtgtaata tatgaagttg ataagtaaga actttgaact ttacgactca aatggagcag
     2221 aacagcttac ataagtgata agtttatatt atatatatat ctgatctttg aaggtatgtg
     2281 ttagaaataa cactttcatg ggtcagtttg ttataatggt tgtataaagt gaaggaccaa
     2341 gctgaaattt gtgcaagagc ttttagtaaa gagatggtgg atcacaagat gatacacttt
     2401 gtataatgta gggttgaacc tttggaatta gttaaataga attcaatagc aacgtttagt
     2461 gaagttaccg atcaaatggg tcaaaatgta gttgtactta ttttacattt
//
LOCUS       XR_011756934            2392 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 6-like (LOC139839377), transcript variant X15, misc_RNA.
ACCESSION   XR_011756934
VERSION     XR_011756934.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2392
                     /gene="LOC139839377"
                     /note="U-box domain-containing protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839377"
     misc_RNA        1..2392
                     /gene="LOC139839377"
                     /product="U-box domain-containing protein 6-like,
                     transcript variant X15"
                     /db_xref="GeneID:139839377"
ORIGIN      
        1 ttcaattttt cctatttcta tatgatatag catatttgat tcttattatt ttgaactcga
       61 ttattttact gatatatgga taagaatata agaaaaagat taattggttt tgatttaatt
      121 tgaatttgaa aattgattat ggttcgttca aaggtaaaat taattgtgct ttcagcaata
      181 ataatcgatt aaaatagaac cgggtacgtt catagtttaa actggtggtt gtcggtgagg
      241 atcaaatgca gcaagtttcg atcaaatgca gcaagtttct ggaggttaca aacctggtat
      301 gcatattgtt ttacctgctt tttttcttca tactgttatg aattctttgt tagtatctgt
      361 ttatttgact gtctgatgtg ttttgtactt aacttgttgc tcttgcctct tataattgat
      421 ttttatgtat gttcttttgg tttaacttca ttgctttata caattgtatg ctactttgtg
      481 cagaataatg gtaagatgtt tttgttgtta tgagagctta ttctcatctg ccctattttt
      541 gcgcagaggt aacatctaat gtttttgttg ttgaagatca ggcacaacaa gtgtctatac
      601 ctgataacaa tgatgtagtt attagttctg ttgataggtt catataattc acatcatccc
      661 atgatcatac atcatctgat tcccatcaac gattcatctt taattagggt ttgaaacttg
      721 gtttaccatg ctttctaggg tttcaaacga ataatcttcg tcagatcgag gcggatgaga
      781 tcggtgagcc tcgctttgtg ttctttattg tagctgtgtt cagcactatt gaattggtga
      841 cacgcataga tggtttgcca tgttcccaaa cactcaaatt gttagtagta gcaacaatcg
      901 atttacagct ggaaaaatgt ggtataaaga acagtagcaa caatgtggag cggtgcttat
      961 cactgatgag ctacaaaaat tatcttattg taataaattc atgcatcttt tttaaaacga
     1021 ttccaatgtg tagaggaaag aatgcacaga ttgataagca acctcgtcag actttcaaaa
     1081 catgtaagta gtttgtattt gatatatgca ccagcttctg gttttagata tgcaaaccta
     1141 ttaatcctaa taattaaaca aaatgtaatg ggacattgag aggtctgtac accggattgt
     1201 tatcacgtta gatgttcgac aacagatcat gtcaatgaat caaaaagctc gggaagaata
     1261 ggagcatgct gatgtcgaaa aacttcaaag agtggatgag gcaacaaaca tgaggctcaa
     1321 tgtactcttt aggagatgca taagtgctct tacacgtggc ggacctggtg aaatgccaag
     1381 gccaattgaa gtacatgctc atgatccact acgttatgtt tctaatattc tcgattggct
     1441 acttcgggtt catgtttatc gatgttgctg attgtgtatg ttttgggtta tattcccatc
     1501 aactgcaact ctgattatat ggtactcaag gtatgctgac aaaatgaaat tttatttgga
     1561 gggcatgcat ctcatggagc tggaaatata tattggttat ctgaagtcaa agaaaaatca
     1621 gattttggtg aatataaatt atggaaaatt ccgaaatcga agagagtttg tttgctcttg
     1681 gtgaaccaaa gttacatgga gaaatgtgca aaacgctcgc tctgatttat gtcaaagtct
     1741 tgagcatttt tctggagcta gaaaatgctc gtccacgtag cacttcaggg attcaagcat
     1801 tatgttcatt gcatatagcg ttagagaaag aaaagatggc tattcaacat tgtgctgaat
     1861 gatataacgg ggaactcagt tgtattgaaa tttgagaagg cgagatcagc tcttgaagat
     1921 ggtcttaaaa gggttgaaga gatagttccc acaaactata ggatgtcagg ttgtttatgg
     1981 agtattggtt caagttaaat atgcaattgg tacttaatct tcattacttg aaacaaattt
     2041 tgcttttgtt tctgtttgaa gtacttaagt tgtgctctgc ctgttatttt ttgatagatg
     2101 ttgtctttat ttgatgttta ttgcttatgc attctgttta gtttgctatg ttgttacact
     2161 tatgttatta gtattctttc ctcttaaaat agtagttatg gttatgtata tgtgatggtg
     2221 tttaagaaaa gtaattttag tcaagtcatt ttgtagttta cctttcttat atattccgtt
     2281 tgaactttta aagtttgtca atgatgatat attgcaatat ttattaggtt tcaggataaa
     2341 aaatgccctt ggtcatcccg agctaataaa gtcttgatct cttatctttg gt
//
LOCUS       XM_071829444            1275 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable glycosyltransferase
            At5g20260 (LOC139839378), mRNA.
ACCESSION   XM_071829444
VERSION     XM_071829444.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1275
                     /gene="LOC139839378"
                     /note="probable glycosyltransferase At5g20260; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139839378"
     CDS             1..1275
                     /gene="LOC139839378"
                     /codon_start=1
                     /product="probable glycosyltransferase At5g20260"
                     /protein_id="XP_071685545.1"
                     /db_xref="GeneID:139839378"
                     /translation="MAVATKFTITLSLLFSLLLLVQNEAASNIKRNDNRRLAIEDQLA
                     KARYNIRKAIVDKRFASTDDNGSFISETTMYKNPFAFLQSYNEMMKTFKIWIYNEGDA
                     PLAHNGPMKCIYSIEGDFIQQMERKGHPVVANHPDEAHAFFIPISVSNIVQYLYMPTE
                     KSGFFRRMQVIVEDYIGVIAERYPYWNRSNGADHFYVACHDWGPWVSKGNPKLFENLI
                     RVLCNANTSEGFIPRRDVSMSEIYGPFNNIPLVGSGQSPNNRSILAFFAGGNHGYVRN
                     KLFQSWGNKQDSDIQVHSYLPKGENYTELLSKSKYCLCPSGYEVASARLTEAIHMGCV
                     PVVIKDHYVLPYNDVLDWSQFSVQVAVTNIPDLKGVLDDIPFSKYLELQKKVMEVQKH
                     FTLNIPAKNFDVFHMILHSVWLRRLNFQLRES"
     misc_feature    262..1113
                     /gene="LOC139839378"
                     /note="Exostosin family; Region: Exostosin; pfam03016"
                     /db_xref="CDD:397245"
ORIGIN      
        1 atggcagttg ctaccaaatt cacaataacg ttaagcctac tattttcact tctacttctt
       61 gtgcaaaatg aagctgcatc caacatcaaa agaaacgata atagacgtct agcaatcgaa
      121 gaccagttag ctaaagcaag atacaatatc cgtaaagcca ttgtcgataa gaggtttgca
      181 tcgactgacg ataatggtag cttcatttca gaaacaacca tgtacaaaaa cccgtttgcc
      241 tttcttcaga gttataatga gatgatgaag acattcaaga tatggattta taatgaagga
      301 gacgctccat tagcgcataa tggtccgatg aaatgtatat acagtataga aggtgacttc
      361 atccaacaaa tggagcgaaa aggacacccg gtggtggcta accatcccga tgaagctcat
      421 gcgtttttta tccccataag cgtctccaac attgttcaat acctttacat gcctacagaa
      481 aaatccggat tttttagacg tatgcaagtg atagtcgaag actacatagg tgtcattgct
      541 gagaggtatc cgtattggaa ccgcagcaac ggtgctgatc atttctacgt ggcttgtcat
      601 gattgggggc catgggtttc taagggaaac cctaaactct ttgaaaatct cataagagtg
      661 ctttgcaatg ccaacacttc agaaggtttc attccaaggc gtgacgtgtc aatgtccgag
      721 atttacgggc catttaacaa catcccactc gtaggcagtg gccaatcgcc taacaatcga
      781 tcgatattag ccttcttcgc aggtggaaac catggatatg tacgaaataa gttgttccaa
      841 tcctggggaa acaaacaaga cagtgatatt caagtccata gttaccttcc aaaaggcgaa
      901 aactacaccg agttactaag taaaagtaag tattgcttat gtcctagcgg ttacgaagtg
      961 gcaagtgcta gattaacaga agcaattcat atgggatgcg ttcctgtcgt tatcaaagat
     1021 cattacgttt taccgtataa cgatgtgttg gattggagtc agttttcagt acaagtagcc
     1081 gtaacaaaca tccctgattt gaaaggagtt ttggatgata taccattttc aaagtacttg
     1141 gagttgcaaa aaaaggtgat ggaagtacaa aaacacttca cacttaatat tccagctaaa
     1201 aactttgatg tttttcacat gattcttcat tctgtgtggc taagaagact caactttcaa
     1261 ttgcgagaat cttga
//
LOCUS       XR_011756935             380 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839379), ncRNA.
ACCESSION   XR_011756935
VERSION     XR_011756935.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..380
                     /gene="LOC139839379"
                     /note="uncharacterized LOC139839379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839379"
     ncRNA           1..380
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839379"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839379"
ORIGIN      
        1 attttttctt ctcctttcca tgtctatcta tatcgatttg gtttcaatct cagcattggg
       61 ttctaccaat tttaacaaaa tgttgtataa ccaaattgtt taattaagat atctcaagtt
      121 caatcagata gtgggattaa attcatattg ccttcagatc cagttgacgc ttatctttct
      181 aatctgaacc aatggactaa tggagtgctc atttgattgc cttatgatcc ttgtgttgaa
      241 tatgtgataa tttctggtgt tgtagagcta tagagctact acatatttaa gtaccatgag
      301 tgatgtttta aaatgtgtga cgttgaatca tttgattgtc atatgatcca tgtgttgaaa
      361 cagtggagta catatttttg
//
LOCUS       XR_011756936             287 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839380), ncRNA.
ACCESSION   XR_011756936
VERSION     XR_011756936.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..287
                     /gene="LOC139839380"
                     /note="uncharacterized LOC139839380; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839380"
     ncRNA           1..287
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839380"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839380"
ORIGIN      
        1 aaacctcatt tttttttggc atattatcta gtgtttgatt cattatcaga acaaaagata
       61 caaacacaca ttctggcatt ctgcttgtaa gttaaagatg agatatgtta aaattcatag
      121 agcaaatctt caatggcgtt tgattcaaca tcatccgttc acgacagcta tcaacatgat
      181 gtgtttctga gctttagttt cagagttttg gaaaagattg gagagagttt gaaccgcttg
      241 atttcaaacc ttttcgcaat agagtattca aagatgtcaa gtctcgc
//
LOCUS       XR_011756937             557 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839381), transcript variant X1, ncRNA.
ACCESSION   XR_011756937
VERSION     XR_011756937.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..557
                     /gene="LOC139839381"
                     /note="uncharacterized LOC139839381; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839381"
     ncRNA           1..557
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839381"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839381"
ORIGIN      
        1 caaacgataa ttaattcaaa catttaggat caattcaaat tattcaaatc aatcatctat
       61 gccaaaccta attttgattg ccctttcaaa atgattgatc catttttagc ttcgtcgtct
      121 tcttatttgg gaacattcga ttcgttattt tgcgactttc gatttcacgg ttgtggttgt
      181 tacgcttttg tttaaagacg gttgcccatc cagcgaagct tattcagcca aatggttacc
      241 aaagatgacg catgaaatgg ttttagtaaa ctatgagaag ccaaactttt ggatttgtaa
      301 gtactgtttt gatgtaatct ttttactagc tggaggcgtc attagttatt ttaagtgtat
      361 gctcattttc atgtaacacg cacatgagtg gaaactttaa cccattaata agagataaat
      421 gagttgattt aggctatact ttatcactga tgagtaagtt gtataagtta tttacaaaat
      481 gctaagaagt gagtcggttt aaaagttagc cgttatgtca ctttccatat ttacctacct
      541 ttgttaatga attgaag
//
LOCUS       XR_011756938             386 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839381), transcript variant X2, ncRNA.
ACCESSION   XR_011756938
VERSION     XR_011756938.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..386
                     /gene="LOC139839381"
                     /note="uncharacterized LOC139839381; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839381"
     ncRNA           1..386
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839381"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839381"
ORIGIN      
        1 caaacgataa ttaattcaaa catttaggat caattcaaat tattcaaatc aatcatctat
       61 gccaaaccta attttgattg ccctttcaaa atgattgatc catttttagc ttcgtcgtct
      121 tcttatttgg gaacattcga ttcgttattt tgcgactttc gatttcacgg ttgtggttgt
      181 tacgcttttg tttaaagacg gttgcccatc cagcgaagct tattcagcca aatggttacc
      241 aaagatgacg catgaaatgg ttttagtaaa ctatgagaag ccaaactttt ggatttcctg
      301 gttctattac atcaaagagt gccaacaggg atttcatata atgcagatga tggagttgtt
      361 aatcgcaaaa ggtactcaaa gttgtg
//
LOCUS       XM_071829446             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome regulatory
            subunit 7 homolog A-like (LOC139839382), transcript variant X1,
            mRNA.
ACCESSION   XM_071829446
VERSION     XM_071829446.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139839382"
                     /note="26S proteasome regulatory subunit 7 homolog A-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839382"
     CDS             58..387
                     /gene="LOC139839382"
                     /codon_start=1
                     /product="26S proteasome regulatory subunit 7 homolog
                     A-like isoform X1"
                     /protein_id="XP_071685547.1"
                     /db_xref="GeneID:139839382"
                     /translation="MPTDIEDEINDEKNLKPLDEHDIALLKTSVTNFPGLGPYSINIK
                     EAEKDVKDKPKRINDLCGIKESDTGLAAPSQWVLDEDDIAILKAYGVRSYSISIKKAE
                     KDVKDMA"
ORIGIN      
        1 tattgttgtt ccttgtacac catccatctc cggcgacaaa aaatttgtaa actcaagatg
       61 ccgactgaca ttgaagacga gatcaacgac gagaagaacc ttaaacctct tgatgaacat
      121 gatattgctc ttctcaagac ttctgtaacc aattttccag gattgggacc ttattccatc
      181 aacattaagg aagccgaaaa ggatgtgaag gacaagccca aaaggatcaa tgatttatgc
      241 ggtatcaagg aatcggacac cggtttagct gcacctagcc agtgggtgct tgatgaagat
      301 gatattgcta ttctcaaggc ttatggggtt agatcttatt ccatcagcat caagaaagcg
      361 gaaaaggatg taaaggacat ggcctaaagg atcaatgatt tatgcggtat taagaaatcg
      421 gacactggtt tagctgctcc tagctgaata ttattccatg at
//
LOCUS       XM_071829447             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome regulatory
            subunit 7 homolog A-like (LOC139839382), transcript variant X2,
            mRNA.
ACCESSION   XM_071829447
VERSION     XM_071829447.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139839382"
                     /note="26S proteasome regulatory subunit 7 homolog A-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839382"
     CDS             58..372
                     /gene="LOC139839382"
                     /codon_start=1
                     /product="26S proteasome regulatory subunit 7 homolog
                     A-like isoform X2"
                     /protein_id="XP_071685548.1"
                     /db_xref="GeneID:139839382"
                     /translation="MPTDIEDEINDEKNLKPLDEHDIALLKTSGLGPYSINIKEAEKD
                     VKDKPKRINDLCGIKESDTGLAAPSQWVLDEDDIAILKAYGVRSYSISIKKAEKDVKD
                     MA"
ORIGIN      
        1 tattgttgtt ccttgtacac catccatctc cggcgacaaa aaatttgtaa actcaagatg
       61 ccgactgaca ttgaagacga gatcaacgac gagaagaacc ttaaacctct tgatgaacat
      121 gatattgctc ttctcaagac ttctggattg ggaccttatt ccatcaacat taaggaagcc
      181 gaaaaggatg tgaaggacaa gcccaaaagg atcaatgatt tatgcggtat caaggaatcg
      241 gacaccggtt tagctgcacc tagccagtgg gtgcttgatg aagatgatat tgctattctc
      301 aaggcttatg gggttagatc ttattccatc agcatcaaga aagcggaaaa ggatgtaaag
      361 gacatggcct aaaggatcaa tgatttatgc ggtattaaga aatcggacac tggtttagct
      421 gctcctagct gaatattatt ccatgat
//
LOCUS       XM_071829448             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839383), mRNA.
ACCESSION   XM_071829448
VERSION     XM_071829448.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139839383"
                     /note="uncharacterized LOC139839383; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839383"
     CDS             1..576
                     /gene="LOC139839383"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685549.1"
                     /db_xref="GeneID:139839383"
                     /translation="MLESEKNARVAELINIQNLSLSGTWNWLHPLRGHTLNDLTELAN
                     SISSCMLFDRPYTWMRTLDPTDIFTTRSLTAILDNLKLSSFASNEETVCIKSIPKKIN
                     IFIWRVKQGRISTRVELDKRGIDLDSIIYPLCNSHVETVEHVLIHCPASSQVWMLVLH
                     WWNLHQIPVTNMEDAISTNLTFSTNALGSII"
     misc_feature    <283..462
                     /gene="LOC139839383"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgctagaat ctgagaagaa tgcaagagtt gctgaactga tcaatattca aaatttatca
       61 ctctccggaa catggaattg gttacatcca cttagaggac acactttaaa cgatttaacc
      121 gaacttgcta actcaatttc ttcttgtatg ttgtttgaca ggccatatac atggatgcgg
      181 acacttgatc caactgacat cttcaccacg aggtccctca ccgccatttt agacaacctg
      241 aaactcagct cctttgcctc taatgaagaa acagtttgca tcaaaagtat tcctaaaaaa
      301 attaacatat ttatttggag agtaaaacaa ggtagaatct caactagagt cgaactcgat
      361 aagcgtggta tcgatctaga ttcaattata tatcctcttt gtaactctca tgttgaaact
      421 gttgagcacg tacttattca ttgtcctgcc tcgtcacaag tatggatgct tgtcttacat
      481 tggtggaacc ttcatcaaat tccagtcacc aatatggaag atgctatctc aaccaatctc
      541 actttctcaa ccaatgcact aggttccatt atttga
//
LOCUS       XR_011756939             331 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839384), ncRNA.
ACCESSION   XR_011756939
VERSION     XR_011756939.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..331
                     /gene="LOC139839384"
                     /note="uncharacterized LOC139839384; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839384"
     ncRNA           1..331
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839384"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839384"
ORIGIN      
        1 atttctcaca atatcaaaaa aattattctc aaattcaaac cattttgaag accttgttga
       61 gtgatttatc gaagatttgg tgattgacac caaaaggtgc tttattatga gtttttgtgc
      121 ttttagaggc gatttttggt gattctcgga gatctctaac aacattcaat catcttcatc
      181 actccgagaa caagcttatt ctattaggtt gatttctttg tcaaatacat taaattcttc
      241 tttatattta tttgtgattt tggttttaga catgattgta ggctaagctt ttaatgttaa
      301 tctagactaa taaccaaggt gttggatgtt a
//
LOCUS       XM_071829449             378 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839385), mRNA.
ACCESSION   XM_071829449
VERSION     XM_071829449.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..378
                     /gene="LOC139839385"
                     /note="uncharacterized LOC139839385; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839385"
     CDS             1..378
                     /gene="LOC139839385"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685550.1"
                     /db_xref="GeneID:139839385"
                     /translation="MSPQDTLIIGSDSRPPVLFDGKYYQWLHRITQYIDYKGDKRERA
                     QGDMEAKNITMQAIPYELFENVDSNTSAKDIWDEIRRQQEGYDMTSVTKLNKALGLYE
                     DFKQEPEELLKDTYRCFNGILNE"
ORIGIN      
        1 atgtctcctc aagatacctt aatcattgga tccgattcca gaccacctgt attgtttgat
       61 ggcaagtatt accagtggct acatcgtatc acacagtaca tagattacaa gggtgataaa
      121 cgtgaaaggg ctcaaggtga tatggaagct aaaaatatca ccatgcaagc aattccttat
      181 gaattgtttg agaatgtgga tagcaacaca tctgctaaag acatttggga tgagatccgt
      241 agacaacaag aaggctatga catgacaagt gtcactaagc tgaataaggc ccttggactt
      301 tatgaagatt ttaagcaaga acccgaggaa ttacttaagg atacctacag atgtttcaat
      361 ggtattctaa atgagtag
//
LOCUS       XR_011756940             211 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839386), ncRNA.
ACCESSION   XR_011756940
VERSION     XR_011756940.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..211
                     /gene="LOC139839386"
                     /note="uncharacterized LOC139839386; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839386"
     ncRNA           1..211
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839386"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839386"
ORIGIN      
        1 aggaaatgga atcagagtca gatattattg cgattcaaga tattacacat gcaatcttta
       61 agtttgcaat caaggaatga actttcgaat gtagtcccat ttaactcata ttatcactgt
      121 atgacgagct actggcctga cctaccgatt tccaaatgta ctttgggatg gaagcggtta
      181 tcatctattt tcatggttga tttgaatgtc g
//
LOCUS       XM_071829450             639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139839387), mRNA.
ACCESSION   XM_071829450
VERSION     XM_071829450.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..639
                     /gene="LOC139839387"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839387"
     CDS             1..639
                     /gene="LOC139839387"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071685551.1"
                     /db_xref="GeneID:139839387"
                     /translation="MNSEMEALNINDTWKITEYQRLIRKLIYLTLTRPDISFTVQCLS
                     QFMHAALQSHVKLAYRVLRHLKSAPGKGVNINKYVSDNCVLTAYSDADWGKCLESKKS
                     ITGYCIFLAGSLISWKCKKQATVSRSSTKLEYRALATITFSLCGLSKDSIEFLSFTLR
                     LGLSTATVDIRYISHSNLATEPDTESESDTEPQSRFYLILWVLSDLRQSVLC"
     misc_feature    256..>423
                     /gene="LOC139839387"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaatagtg aaatggaagc tttaaacata aatgatactt ggaaaattac tgaataccaa
       61 agactaatta ggaaacttat ttatcttact ttaactagac ctgatatatc ttttactgtt
      121 caatgtctta gtcagtttat gcatgctgca ttacagtctc atgtcaaact tgcatacagg
      181 gttttaaggc atttaaagtc tgcacctggt aaaggagtta acattaataa atatgtatct
      241 gataattgtg tgcttactgc ttattctgat gctgattggg gtaaatgtct agagtctaaa
      301 aaatctataa ctggttattg tattttctta gctggttcat taatctcttg gaaatgtaaa
      361 aaacaagcaa ctgtttctag atcttctact aaattagaat atagagcttt agctacaata
      421 acttttagtt tgtgtggttt gagcaaggat tcgattgaat ttctaagttt tacacttaga
      481 ctcggtttgt caactgctac agtcgacatt cggtatattt cacattcgaa tttggctacc
      541 gagccagata ccgaatccga atctgatacc gaaccacaat ctcggtttta cttgatactt
      601 tgggttttaa gtgacctaag gcagtctgtt ttgtgctaa
//
LOCUS       XM_071829451            1785 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839388), mRNA.
ACCESSION   XM_071829451
VERSION     XM_071829451.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1785
                     /gene="LOC139839388"
                     /note="uncharacterized LOC139839388; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839388"
     CDS             1..1785
                     /gene="LOC139839388"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685552.1"
                     /db_xref="GeneID:139839388"
                     /translation="MTKSDESDGSKITQVSDIDFGYPLYLHPSDTSTTALISLKLKGT
                     ENYNWDICNSVALSWILKSISEDLFVAQVFSVSAKVVWDELKETYVKIDESITYNLHH
                     KINSITQSGSTISDYYHKLISLWKQFDALVKLPTCVYDANKDFKTHNDLIYLMHFLMG
                     LDDSFSTISSNILTSDPLPNVKYAFTTISREESHRGSSQALTNKSQSSTFLVSKTFDN
                     SKRVGKGPNPNLKCTKCNRDGHTIDRCYEVVGYPSWWVKGYNTNKNLGQKVGYKNNNA
                     MTNDYSQMSNSATCARNSEKQNSSSYPFSSEQINKLTSLIKDNSLSGNAHIIWEIVDS
                     GASQHITGSSDNMTNLVDVSRLNLTVGHPNGTLAKIDRFENLKIKNNLVLLDVLVISG
                     YCVSHLSVHKLSKDNKLIMVFLVAVLVILFLLKSDTADLGILLVRAVWVFLLKSKDET
                     VDNIKSFVQLLNNKFGVKVKNIRSDNETEFVNQNFNSFCTEKGIIHQTTCAYTPQQNG
                     IAERKLMHVLSVARSLLFKKNIDVNSEYFSFFESALKPSINSPRPNDEWRADIDSDEA
                     SGSDQNDTTSSSSEASGSGHLGDTTSLN"
     misc_feature    169..594
                     /gene="LOC139839388"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    <1342..1536
                     /gene="LOC139839388"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgactaaat cagatgagag tgatggatca aagatcactc aagtgagtga tattgatttt
       61 ggatatccat tgtatcttca ccctagtgat actagtacaa ctgctcttat ttctttaaaa
      121 ttaaaaggca ctgagaacta taattgggat atatgtaatt ctgtggcgtt gtcctggatt
      181 ttgaaatcta tatctgagga tttatttgtt gctcaagtat ttagtgtatc tgctaaggtt
      241 gtttgggatg aactgaaaga aacttatgtt aagattgatg agtcaattac ttataattta
      301 catcacaaaa ttaattctat aactcaaagt ggttctacta tttctgatta ttatcacaag
      361 ttaatttctt tatggaaaca gtttgatgct ttggttaaac tacctacatg tgtttatgat
      421 gcaaataaag attttaaaac tcataatgat cttatctacc taatgcactt cttaatgggc
      481 ttagatgact ctttttcaac cattagtagt aatattttaa ccagtgatcc tctaccaaat
      541 gtgaaatatg cttttacaac tatttcaaga gaagaatctc atagaggttc ttctcaagct
      601 ttaacaaaca aaagtcaaag ttcaactttt ctggtttcta aaacatttga taattcaaaa
      661 agagttggaa aaggtcctaa cccaaactta aaatgtacta aatgtaatag ggatggtcat
      721 actattgata gatgttatga agttgttggg tatccttcct ggtgggttaa gggctacaat
      781 actaataaga atctgggaca gaaggttgga tataaaaata ataatgctat gaccaatgat
      841 tattctcaaa tgtctaactc tgctacttgt gctcgaaaca gtgaaaaaca gaattctagt
      901 tcttatcctt tttctagtga gcagataaat aagctgacga gtcttatcaa ggataatagt
      961 ttgtctggaa atgctcatat tatatgggag attgttgact ctggagctag tcaacatata
     1021 actggttcta gtgataatat gactaatctt gttgatgttt ctagattgaa tttaactgtt
     1081 ggtcacccta atggaactct tgctaaaatt gacagatttg aaaatttaaa aattaaaaat
     1141 aacttagttt tacttgatgt tttggttatt tctggatatt gtgttagtca tctgtctgtt
     1201 cataagttgt ctaaagacaa taagttgatt atggtatttc ttgttgcagt cttagttatt
     1261 ttgtttctac tcaagtctga cactgcagac ttgggcatcc tgctagtcag ggctgtttgg
     1321 gttttcttgt taaagtccaa agatgaaact gttgacaata ttaaatcttt tgttcaatta
     1381 ttaaacaata agtttggagt taaagttaaa aatataagaa gtgataatga gactgagttt
     1441 gttaatcaaa actttaattc tttttgtact gaaaagggta ttatacatca aacaacatgt
     1501 gcttatactc ctcagcaaaa tggaattgct gaaagaaagc tcatgcatgt tttaagtgtt
     1561 gcaagatctt tactctttaa aaaaaatatt gatgttaatt ctgaatactt ttctttcttt
     1621 gagtctgctt taaaaccatc cattaattct ccaagaccca atgatgaatg gagagctgat
     1681 attgactctg atgaagctag tggcagtgat caaaatgata ccaccagttc atcaagtgag
     1741 gctagtggta gtggtcactt aggtgatacc actagtctaa attaa
//
LOCUS       XM_071829452            2582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides inorganic pyrophosphatase
            TTM1 (LOC139839389), mRNA.
ACCESSION   XM_071829452
VERSION     XM_071829452.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2582
                     /gene="LOC139839389"
                     /note="inorganic pyrophosphatase TTM1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839389"
     CDS             286..2262
                     /gene="LOC139839389"
                     /codon_start=1
                     /product="inorganic pyrophosphatase TTM1"
                     /protein_id="XP_071685553.1"
                     /db_xref="GeneID:139839389"
                     /translation="MSQENSLVAESPRRRSGLLRDQVQLVKKKDSSRYEIAPIQDPLS
                     FEKGFFVVIRACQLLVQKNEGILLVGVAGPSGAGKTVFTDKVLNFMPSIAVITMDNYN
                     DATRIVDGNFDDPRLTDYDTLLENIRGLKEGRPVEVPIYDFKSSSRIGYRKQEVPSSR
                     IVIIEGIYALSEKLRPMLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETV
                     YPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPSYILKSKKAVTPEQMKAVLSQEHEER
                     KEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVR
                     LLGGLMALGYTIAAILKRSSHVFFDEKVCVKTDWLEQLNRTYVQVQGRDRLYVKYIAD
                     ELGLDGTYVPRTYIEQIQLEKAVNDVMTLPDDLKTKLSIDDDLVSSPKEALSRASADR
                     RSKYLNRGGAHSLSTRERNLSKLTKLSVNSRRFDGRTPDSPATVANQGVITNLSEQIT
                     TLNERMDDFTSRIEELTSKFAQRRVPSHQNMASQVAESCNGSATSLFMAGLGNGSLTG
                     LPNSGSSNQLARETPLMEEVLLIARGQRQVMHQLDNLSNLLRDYVLEKGQQGGASDKN
                     TRLIEIESFGLPIVATLAIGGLGFLLSRALYSQK"
     misc_feature    286..2256
                     /gene="LOC139839389"
                     /note="phosphoribulokinase/uridine kinase; Region:
                     PLN02318"
                     /db_xref="CDD:177952"
     polyA_site      2582
                     /gene="LOC139839389"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caggcggctt atttaaccac caccaatctt ccctccatca caatcaattc atcatcactt
       61 aacccatccc atcttctgct aatagaatca ctaccttttc aacatcatca aagattaaag
      121 tttataactt tcaaccccac acgattcttc aacatcttgt tctcttacat tatatataac
      181 aaatttaaca atatattatt gaaccagtta ctttctttca acatacccac aaaaaagttg
      241 cgatctttca tgagttcttg agcatatatc caatctattg taaatatgtc ccaagaaaat
      301 tctttagttg ctgaatcacc taggcgacga tctggactgc taagagatca agttcaattg
      361 gttaagaaaa aggattcgtc tcgttacgag atcgctccta ttcaagatcc tctatcgttc
      421 gaaaagggat tttttgtagt gataagggca tgccaattat tggttcaaaa aaatgagggc
      481 atcttattag ttggtgtcgc aggtccatct ggtgctggaa agactgtatt taccgataaa
      541 gttctcaact ttatgcccag cattgctgtt ataacaatgg acaactacaa cgatgcaact
      601 cgtattgttg atggcaactt tgatgatccg aggctgacag attacgatac cttacttgag
      661 aacattcgtg gtcttaagga agggaggcct gttgaagttc ctatttatga ttttaagtcc
      721 agttcaagaa ttggttatag aaaacaagaa gttccttcgt ctcgaatagt gattattgaa
      781 ggaatttatg cactgagtga aaagcttaga ccaatgctag atcttcgtgt ttctgtcact
      841 ggtggagttc actttgatct tgtcaagcgg gttttgaggg atattcagcg tgctggacaa
      901 gaacctgaag aaattattca tcaaatatcc gaaacggtat atcctatgta caaagctttc
      961 atcgagcctg atctacaaac cgcacatata aaaatcatca acaagttcaa tcctttttct
     1021 ggattccaga atcccagtta tatattaaag tctaagaagg cagtgacccc agagcaaatg
     1081 aaagccgttc tttctcaaga acacgaagaa cgaaaagaag aaacttatga tatatatctc
     1141 cttcctcctg gtgaagatcc cgaagcttgt caatcgtatt tgaggatgag aaatagggat
     1201 gggaaataca accttatgtt tgaggagtgg gtgactgata gtccattcat aatatcacct
     1261 agaatcactt ttgaagtgag tgtgcgtctt cttggtggac taatggcatt aggatacaca
     1321 attgctgcca tactcaaaag aagcagccat gttttctttg atgaaaaggt ctgcgtgaaa
     1381 accgattggt tagagcaact taatcgcacc tatgttcagg tgcaaggacg agaccgtttg
     1441 tatgtaaaat atattgcaga tgagctgggg ttagatggta catatgttcc tcgaacttac
     1501 attgaacaga tacagctaga aaaagctgta aacgatgtga tgacactacc agacgatcta
     1561 aaaacgaaac ttagcatcga tgatgatctc gtatcaagcc ctaaagaagc attgtctcgt
     1621 gcttctgctg atcgaagatc caaatacctt aaccggggtg gggcccactc actttcgacg
     1681 cgtgaaagga acttatcgaa gctgacaaaa ctctctgtta atagtaggag atttgatgga
     1741 aggacccctg attcaccagc aacagttgca aatcagggag tgattactaa cttatcggag
     1801 caaattacga ctctaaacga aaggatggat gactttacat ctcgtattga agaactaact
     1861 tcaaaatttg ctcaaagaag agtaccgagc catcaaaata tggctagcca ggttgctgaa
     1921 tcatgcaacg gctctgcaac ttcactgttc atggctggct taggaaacgg ttcattgacc
     1981 ggtctaccga attccggatc ttctaaccag ttggcccgag agacccccct catggaagag
     2041 gtgctactca tagcaagggg gcaacggcaa gtgatgcatc agttggacaa cttaagtaac
     2101 ctgttacgtg attacgtgtt agaaaagggt cagcaaggtg gtgcgtctga taagaacaca
     2161 cgattgatag agattgaatc atttggacta cccattgttg caacattggc aattggtggc
     2221 ttgggtttct tattatccag ggctctttat tctcagaagt gatcatcatt tatcatttat
     2281 atatatatat aaaaaggtat tttatacaaa tcaacaaata aacattcaag aggctgagat
     2341 tcaaatctca catgtataag tattaacgtt tagaggatct ggcgaatatt gctcctggaa
     2401 atcacacaaa aacttttagt agcagaaatt gtatgttgtg tttaacagaa atcgaagttc
     2461 tttttagttg agtaaacaat agcaggtatg ttgtgtttgg ctagtcaggt tccataatac
     2521 ctgcagctta ttactgacaa tttctaccca ttcccttata gataagtcga ttcagatttg
     2581 cg
//
LOCUS       XM_071829453            1599 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-glycosyltransferase
            89B2-like (LOC139839390), mRNA.
ACCESSION   XM_071829453
VERSION     XM_071829453.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1599
                     /gene="LOC139839390"
                     /note="UDP-glycosyltransferase 89B2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139839390"
     CDS             112..1530
                     /gene="LOC139839390"
                     /codon_start=1
                     /product="UDP-glycosyltransferase 89B2-like"
                     /protein_id="XP_071685554.1"
                     /db_xref="GeneID:139839390"
                     /translation="MPITGINNGDHILVFPYPAQGHMLSLLDLTHQLAIRGVQITILI
                     TPKNLPTLTPLLSAHPTTITTLVLPLPPHPGIPSDIENVKDLPGGGFRAMMVALGDLY
                     NPIKNWFQNHHNPPVAIVSDFFLGWTHRLAVELGVRRYCFSPSGALALSIIFYMWRYQ
                     PKRVDTQNENEVIKFTKIPNLPEYPWWQLSPIYRSYSEGDETSVFIKDGFLDDIASWG
                     VVINSFTELEGVYVEYLKMELGHDRVFAVGPLLPPDSKITERGGPSSNDVLSWLDTCD
                     DHTVVYVCFGSQLVLTNKQMEAIAFGLEKSGVRFVWSVKEPTTGHVAGNYGKIPSGFE
                     DRVVGRGVVIKGWAPQVAILNHHSVGAFLTHCGWNSVMEAVVADVLLLTWPMSADQYS
                     NATLLHELKVGMKACEGAETIPDSNELAELFRKSVSEDTRVERERAKEFAKVAKEAVG
                     ENGSSIGELDRLVANFSLEKSC"
     misc_feature    112..1512
                     /gene="LOC139839390"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(172..177,181..183,616..618,625..630,658..660,
                     745..747,970..972,1204..1206,1210..1212,1216..1221,
                     1228..1230)
                     /gene="LOC139839390"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(172..174,970..972,1204..1206,1210..1212,1216..1221)
                     /gene="LOC139839390"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    175..177
                     /gene="LOC139839390"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     polyA_site      1599
                     /gene="LOC139839390"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacctttcta taaactccgt atctttccag ccggcttctt ttaccaatag ataaaaccca
       61 aaaaatcaca tatttttatc cgcctcgcac accatcatca ctaaaccaaa tatgccgatc
      121 accggaatca ataacggcga tcacatctta gtgttcccat acccagctca aggtcacatg
      181 ttatcacttc ttgatctcac acatcaatta gcaattcgtg gagtacaaat caccatctta
      241 atcacaccta aaaacttacc cactttaacc ccactacttt ccgcccatcc aaccaccatc
      301 accacccttg tcctccctct accgccgcac cccggcattc cttccgatat cgagaatgtc
      361 aaagacttac ccggtggtgg atttagagcc atgatggttg ctttaggtga tctctataac
      421 cctattaaaa attggtttca aaaccatcac aatccgccag ttgcgattgt ttcagacttc
      481 tttttgggct ggacccaccg gcttgcggtt gagctcggtg ttcgccggta ttgtttttcg
      541 ccgtccggcg cgttggctct ttcgattata ttttatatgt ggagatacca gcctaaaaga
      601 gttgatacac aaaatgaaaa tgaagtgata aagtttacca aaattccaaa tttaccagaa
      661 tacccttggt ggcaattgtc tccgatttat cgaagttatt cagaaggaga tgagacttct
      721 gtttttatta aagacgggtt tttagatgat atagcaagtt ggggagtcgt tattaactcg
      781 tttaccgagt tggaaggagt ttatgttgag tatttgaaaa tggaattggg tcatgatcgc
      841 gtgtttgcgg ttgggccgtt actccctcct gatagtaaaa tcacagagag aggtgggccc
      901 agctcaaacg acgtgttatc atggcttgac acgtgtgatg atcacacggt tgtgtatgtt
      961 tgttttggaa gtcaactagt gttgaccaat aaacaaatgg aagcgattgc attcgggttg
     1021 gaaaaaagtg gggtcaggtt cgtatggtca gtaaaggagc cgactacagg acacgtggca
     1081 ggaaattatg gtaaaattcc aagtgggttt gaagatcgtg tggttggaag gggtgttgtt
     1141 atcaaagggt gggctccaca agtggcgata ttaaatcacc actcagtggg tgcgtttctg
     1201 actcattgtg ggtggaactc ggttatggaa gcagtagtgg cggatgtatt gttgctgacg
     1261 tggccgatga gtgctgacca atactcgaat gcaacgttgt tgcacgagtt aaaagtggga
     1321 atgaaagcgt gtgagggagc ggagacaatt cctgactcga acgagttagc cgagttgttt
     1381 aggaaatcag tgagtgaaga tacacgagtt gaaagagaac gagcaaaaga atttgcgaag
     1441 gtggctaaag aagcggttgg tgaaaatggg agttcaatag gagaattgga taggttagtg
     1501 gctaattttt cacttgaaaa aagttgttga aatgataacc gaaactcaat gaagttgtac
     1561 ttattattgt ctccatgtca aagtcaatat ttatcttaa
//
LOCUS       XR_011756941             331 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839392), ncRNA.
ACCESSION   XR_011756941
VERSION     XR_011756941.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..331
                     /gene="LOC139839392"
                     /note="uncharacterized LOC139839392; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839392"
     ncRNA           1..331
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839392"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839392"
ORIGIN      
        1 tttatacatg acgtacactt tgaagcttgg acttattcag tagaagtgta gaaaagtgat
       61 ctttccaggt ttcaaacaaa gcgtgtagtc aatgaatgcg agtgtatgca aatgcttcat
      121 tgttttagtc caagattgtt aagtttaaat acaaaggcat tcagattgca gtttatataa
      181 acatgctctt aacggaatat agttcctctt attccgataa tcacgaagga aagagcgatg
      241 ttcatatggt tattcatact ttgtaatgta agtatctaat tgttaagaga aattcaaaaa
      301 gttcaactac cgtgtcttcc aactgtaagt a
//
LOCUS       XM_071829454            6472 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RPS4B-like (LOC139839393), transcript variant X1, mRNA.
ACCESSION   XM_071829454
VERSION     XM_071829454.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6472
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6472
                     /gene="LOC139839393"
                     /note="disease resistance protein RPS4B-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839393"
     CDS             524..6229
                     /gene="LOC139839393"
                     /codon_start=1
                     /product="disease resistance protein RPS4B-like isoform
                     X1"
                     /protein_id="XP_071685555.1"
                     /db_xref="GeneID:139839393"
                     /translation="MMSYEPSSASSSITISKGYDVFLSFRGEDTRTGFTSHLYDALIR
                     KHIRTYQDDKSLEIGNFIAPELLRAIEASKFAIVVLSPHFATSKWCLEEIVKIVDCRE
                     LGKLVVIPVFYHVSPSDVRLQRGCYVQGFTNHEVNPEIPPQKVETWKAAFKKLGDISG
                     YHVTQHRKESEVVNEIVKKIFTDMQVTLPTSLPDGLVGIESRLNEVKRILNMESSEVR
                     FIGICGMSGVGKTTLAEVVYEAIQNEFQESSFIENIKDISKERNTDLCKLQQKLLDDI
                     LKGESVPVRSVKHGQTLLKTKLRDLKVIIVLDDVNHEDQLTYLAGGREWFGNGSRIII
                     TTTNTDLLNPHRINATYVCEELEGDEALSLFCQSAFGGHPTNGYDNLSKDIVKLAGGL
                     PLALNVYGSLLCGKEERYWKEILKKFQEYPHKKVVERLEIGYARLDKDEQDTFRYIAC
                     FLKGRDKDLIKDILTDIGLYPECGIADLINKFLITYNHDDSIWMHDLLQQMCWEILRK
                     DSERDNGKYIAIKRRQDIVDILTYRPKGMRTIEIINQEPCKVEEEVFFDDPKCFSKML
                     KLRFLRISNIRFSQGLNYLSNDLRILEWYGCSLKSLPSTFAPKHIFELDMSCSQLETL
                     WEKDLDLPNLTSINLSFSTNLIKIPDLTSTPKLLILNLEGCTNVKELHDSVLVQKRLQ
                     YLNLKGCELLQNLGGCIMEMDSLETLILSGCSNLDYIPEFGLNMKHLEHLYVNGTNIK
                     KLPESLGKMCNLRKIDVSETSIEEIPSSTHQLKKLRFLHVHRCMLLSPCRGFLYTNLD
                     TVSYIREIDLSYCNLSAVPEGIGLLYRLVRLDLSGNDFVLLPASISLLSNLKMLYLNN
                     CKRLQSLPKLSIVNEESLYGLQIRFNYYISGEVVDFSRFNASSDNGSPTVSCFNCPRL
                     AENESGSYLVDRILNSYLQLRTNYWITPAAVFEIVGAGSKIPSSFKLITSAVNVILEG
                     PWIGVAICAVIAVHQIDASMDAAKYTVTAHIHVGEKHWMIPFPISFLMASVEENQLVF
                     YWTDSDDLLRIVDSRQENNFGFSFSVEPDGNVEVTKFGVRFIREEDIFEHEDSASDVA
                     NFLFKSSHKVRWSRGTREAVTDHHRHSCHSAMRTIKFLFECRKELYSLDDIHKILKCL
                     SEITQHVFVECKKEWRHAQLITLVYDYYRISQGISQLYKEFVVLLKNVSYGWLSLTFA
                     LEQMVAKGRTDDCTYQEMIKQLNDLEAAECVRFSDSFIKLLAYICKQIFDYSGHLKKN
                     NIQKVNKEFDLFMTLTQVSSITLAGVDRILGAYAIKDMLDDTTTLDTDSFTLGDETTN
                     KLSEQQHTTTFSSYLFGSLKKQRGEAGEARVSCLVNGCAADLNSCTEYHRRHRVCKTH
                     SKSRVVTINGKEQRFCQQCSRFHSLGEFDKLKRSCRKRLDGHNRFSRSLRRQSLYWND
                     GSSFTNHQVDRSENRLAGRFGRGFRILDFYDNAVLVQELKMKMGRLNSFTNEGEVEMM
                     TVIDKLHNKTDDLAKTIEDMSIHACKFSHDVVEAGVTLNQFIAGGSLQVTQFGVQFVF
                     DEEANCANSMCEEAMTILFRAVSSLPTDLRWYIRACEAADSSLLSCHSTIIHDNTRNI
                     INFITVGRATSVHQIHEIVNCVLGNNLEAFKVLSECKEEWRLRAPLFSMVTSYYDVCR
                     ETCRLYNDFVMLLKDVSDGLLSLKLEVEQIRVKIKEEKYTYKEMLQHLNGIKTTATYI
                     CFSGNIVKSFAHVCTQTVTFASLFDEVIQEFTSVKILAQVSSGLVAGVFSIMCALMVG
                     YFVTEGRQDDLESVWLHLIRTFSLSGFLSMCDRLVTSYKSWSIGEFSDIDSHLGGLKF
                     NLAKLTYFTEEHTVVVIDELNSLMTKIDNIMVSIEYESIHAHKYKLDIMEAGTSLGIW
                     E"
     misc_feature    578..>3163
                     /gene="LOC139839393"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
     misc_feature    2225..2335
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2423..2491
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2492..2563
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2636..2707
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2708..2776
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2777..2845
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2846..2929
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2930..2998
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2999..3067
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3068..3133
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3926..>4384
                     /gene="LOC139839393"
                     /note="Protein of unknown function (DUF677); Region:
                     DUF677; cl21731"
                     /db_xref="CDD:451372"
     misc_feature    4580..4813
                     /gene="LOC139839393"
                     /note="SBP domain; Region: SBP; pfam03110"
                     /db_xref="CDD:460809"
     polyA_site      6472
                     /gene="LOC139839393"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acagactcta actctatcac agataaaaat gacctaatta taaattctat cttataaacg
       61 tcttaaatta gatcctcaaa ccacacactg gttgaaagct cggatgtgat cacgagaata
      121 tcaattagcc tacacaaagt taaacatcga agtgcttatt cgttatacac gcagttaaaa
      181 tgatgttaat agacttgttg accgcagaag ttgttgaccg ttgaaatttg aaccctaatc
      241 ctgatttgta gtcgatccat ggtcaatttt cactcccaaa accctaacat ctcacttcct
      301 ctatcggatt cgattatgat tcagccgttc aactcttcac gagagtttat gtttcagaat
      361 tcgcctcttt gttgagatcg tacataatca ttgtgagctg tagagatgat gtcttataca
      421 taatcatcat cgtcaacatc atctaagaca agagtttcaa acggttatga tattttcata
      481 attatagatc gtacatgatc atactgagct gtagactgta gagatgatgt catatgaacc
      541 atcatcagca tcatcttcaa ttacaatttc taaaggttat gatgtttttt tgagctttcg
      601 aggggaggac actcgtactg gtttcactag ccatttgtat gatgctttaa tccgcaaaca
      661 catcagaacc taccaagatg ataagtcact agaaattggg aattttattg ctcctgagct
      721 cctacgcgct atagaagcat caaaatttgc catagtggtt ttatcgcccc attttgcaac
      781 atcaaaatgg tgtttggagg aaatcgttaa gattgttgat tgtagggagt taggcaagct
      841 ggttgttatt cctgtttttt accatgtgtc tccctcggat gtacgccttc aaagaggctg
      901 ttacgtacaa ggcttcacta atcatgaagt aaatcctgaa attccacctc agaaggtgga
      961 aacttggaaa gcggctttca aaaagttggg tgatatctcg ggatatcacg tgacacaaca
     1021 taggaaagaa tcagaggttg taaatgaaat tgtaaaaaaa atcttcacgg acatgcaagt
     1081 taccttacca acgtctcttc ctgatggcct ggtgggaatc gaatcacgat taaatgaggt
     1141 gaagagaatt ttaaatatgg aatcttctga agttcgtttt atagggattt gtgggatgag
     1201 tggagttgga aaaactactc ttgctgaagt tgtttatgag gctattcaaa atgaatttca
     1261 agaaagtagc tttattgaaa acatcaaaga catttccaag gaacgtaata cagatttatg
     1321 caagctccag caaaaactcc ttgatgacat tttgaaaggg gaaagtgtac ctgtacgaag
     1381 tgttaagcat ggacaaactt tgttgaagac gaagctacgt gatttgaagg ttataattgt
     1441 tttggatgat gttaatcatg aagaccaatt aacgtatttg gctgggggac gtgaatggtt
     1501 tggaaatggc agcagaatca taataaccac aacaaataca gacttgctga atccacatag
     1561 aataaatgca acatatgttt gtgaggaatt ggaaggtgat gaagctctta gtctcttttg
     1621 tcagtcagca tttggaggac atcctacaaa tggttatgac aacttgtcga aagatattgt
     1681 gaagcttgct ggtggtcttc cgctagctct taatgtttac ggttctctat tatgtggaaa
     1741 agaagaaaga tattggaaag agatattgaa gaaatttcaa gaatatccac ataaaaaagt
     1801 ggttgaaaga cttgaaatag gttatgctag gctagataaa gatgagcagg atacattcag
     1861 atatattgcg tgtttcttga aagggagaga caaagatttg ataaaagata tactaacaga
     1921 tattggtttg taccctgagt gtggaatcgc tgatcttatc aacaagtttc ttataactta
     1981 taatcatgac gatagcatct ggatgcatga tcttctccaa caaatgtgct gggaaattct
     2041 tcgtaaggac tcagagagag acaatgggaa gtacattgca atcaaacgtc gtcaagatat
     2101 tgtagatatc cttacataca gaccaaaggg gatgagaaca atcgaaatca tcaaccagga
     2161 gccatgtaag gttgaagagg aagttttctt tgatgatcct aaatgtttct ctaagatgtt
     2221 gaaactcaga tttttaagga ttagtaatat acgattctct caaggtctta actatctttc
     2281 caatgatctc cggattctgg aatggtatgg atgttctttg aagtcgttgc cttcaacttt
     2341 tgcacccaaa catatttttg aacttgatat gtcttgcagc caacttgaaa cactttggga
     2401 gaaagatctg gatctgccta atttgacatc tattaacctc agtttttcta cgaatttgat
     2461 taaaattcca gacttgacat caaccccgaa actattgata ttaaatcttg aaggctgcac
     2521 aaatgtgaaa gagcttcatg attcggttct tgttcagaaa aggctacaat acttgaatct
     2581 gaaagggtgt gagcttcttc aaaaccttgg tgggtgcatt atggaaatgg attctcttga
     2641 gacacttatt ttatctggct gctctaatct cgattatatt cctgaatttg gactgaacat
     2701 gaaacacttg gagcatctgt acgtgaatgg aactaacatc aagaaattgc cagaaagttt
     2761 ggggaaaatg tgtaatttga ggaagattga tgtgagtgaa acttcaatag aagagatacc
     2821 ctcttccacg catcagctga agaagttaag attcctacat gttcacagat gcatgctttt
     2881 atccccatgc agaggttttc tgtatacaaa tctggataca gtatcatata tacgagaaat
     2941 tgatttaagt tattgtaatc tatctgctgt gcctgaaggt attggtttgt tgtatcgttt
     3001 agtaaggctg gatctttctg gaaatgattt tgttttactg ccagcaagta tcagtctcct
     3061 ttcaaatctt aaaatgcttt atctgaataa ttgtaagagg ctccagtcat taccaaagct
     3121 ttccatagta aacgaggagt cactctatgg acttcagatc agatttaatt actatatttc
     3181 aggagaagtg gtagactttt ctaggtttaa tgcctcaagc gacaatggta gtccaacggt
     3241 gtcttgtttc aactgcccaa gactagcaga gaatgaaagc ggtagttatc tggtggacag
     3301 aatattgaat agttatcttc agttacgaac gaattactgg attacaccag cagctgtatt
     3361 tgagatagtt ggggcgggaa gcaagattcc atcaagcttt aaactgataa catctgctgt
     3421 aaatgtgatc ctcgaaggcc catggattgg ggtggctata tgtgctgtta ttgccgtcca
     3481 ccaaattgat gcttctatgg acgccgccaa atacacagta acagctcata tccatgttgg
     3541 agaaaaacat tggatgattc cctttcccat aagttttttg atggcaagtg tggaggagaa
     3601 ccaattggtt ttttactgga cagattctga tgacttacta cggattgtag attctcgcca
     3661 agagaacaac tttggtttct catttagcgt tgagccagat ggtaatgtgg aggttacaaa
     3721 gtttggagtt cgttttatac gtgaggaaga catatttgaa catgaagatt ctgctagtga
     3781 cgtcgcaaac tttctgttta aatctagtca taaagtgcga tggtctagag gtacccgtga
     3841 agctgttaca gaccaccatc gccattcctg tcattcggcc atgaggacga taaaatttct
     3901 ttttgaatgc cgaaaagaac tttattcctt ggatgacatc cataaaatcc ttaaatgtct
     3961 aagtgaaatc acccaacatg tttttgttga atgcaaaaaa gagtggagac acgcacagtt
     4021 aattactcta gtttatgact attatcgaat cagtcaagga atctctcaac tttacaaaga
     4081 gtttgtggtg ttgctcaaaa acgtatcgta tggctggttg agtctaacct ttgcattgga
     4141 gcaaatggtg gcaaaaggca gaacagacga ttgtacttat caagagatga taaaacagct
     4201 taatgatctt gaagctgctg aatgtgttag attttctgat agttttatca agttgttggc
     4261 ttatatctgt aagcaaatat ttgattattc aggacatctg aaaaaaaata atatccaaaa
     4321 agtaaataaa gagttcgatt tattcatgac attgacgcaa gtgtcaagca taacacttgc
     4381 aggagttgac cgtattctgg gcgcatacgc gatcaaagat atgttggatg atactacgac
     4441 tttggataca gattctttca cattgggaga tgagacaacg aacaagttga gtgagcaaca
     4501 acatacaaca acattttcat catatctttt tggttcattg aaaaaacaaa gaggggaggc
     4561 tggtgaggcg cgtgtatcat gtttagtaaa tggatgtgca gcagacctta acagttgcac
     4621 agagtatcat cggcgccata gagtttgtaa aactcattct aagtcacgtg ttgtcacaat
     4681 aaatggcaaa gaacaaaggt tttgccagca atgcagtaga ttccattcac ttggtgagtt
     4741 tgataaattg aagaggagtt gcagaaagcg tcttgatggg cacaacaggt ttagtaggag
     4801 cctgaggaga caatccctgt attggaatga tgggagctcg ttcactaatc atcaagttga
     4861 taggagtgaa aaccgtttgg ctggacgttt tggaagagga ttcaggatct tggatttcta
     4921 tgataatgca gttcttgtac aagagttgaa gatgaagatg ggtcgactta attcttttac
     4981 aaatgagggt gaggtggaga tgatgactgt gatagataag cttcataaca agacggatga
     5041 cttggcaaag actatcgagg atatgagtat tcatgcttgt aaattcagtc atgatgtagt
     5101 ggaggcagga gtaaccttga atcaatttat tgcaggaggt agtttacagg tgactcagtt
     5161 tggagttcaa tttgtgtttg atgaagaggc aaattgtgca aattctatgt gtgaggaggc
     5221 aatgaccatt ctgtttcgtg ctgtttcatc tcttcctact gatctgcggt ggtatatacg
     5281 tgcttgtgaa gcagctgatt caagcctcct ctcatgtcat tcaaccatca tccatgacaa
     5341 cacacgcaat ataataaatt tcattacggt aggacgggca acgtccgtgc atcagatcca
     5401 tgaaatcgtt aattgtgtac ttggaaacaa cctagaagct ttcaaggtct taagtgagtg
     5461 caaggaagaa tggaggctgc gtgcaccatt attttcgatg gtaactagct actatgatgt
     5521 atgccgtgaa acctgccgac tttacaatga ttttgtaatg ctgctgaaag atgtatctga
     5581 tggcttgttg agtctaaagt tagaggtgga gcaaattcgg gtgaagatca aagaggaaaa
     5641 atacacctat aaagagatgc tacagcacct caatggtatc aaaacaactg ctacatatat
     5701 ttgcttttct ggtaacattg tcaagtcatt tgcgcatgta tgtacccaaa cagttacttt
     5761 tgcaagtttg ttcgatgaag taattcagga gtttacgtcg gtgaagatat tagcacaagt
     5821 ttcaagcgga ttggttgcag gtgtttttag tataatgtgt gctttaatgg ttggctactt
     5881 tgtaacggaa ggaagacaag acgacttaga gtctgtgtgg ttacatttaa tccgaacttt
     5941 ttcattgagt ggtttcttaa gcatgtgtga ccggctggtt acgagttata aaagctggtc
     6001 gataggtgaa tttagtgaca tagattctca tctaggtgga ttgaagttta acttggcaaa
     6061 gcttacttat ttcactgaag aacatacggt ggtggttatc gatgaactaa attcactcat
     6121 gacgaagata gataacatca tggtgagtat tgaatatgag agtatccatg ctcataaata
     6181 taagcttgat ataatggagg caggaacaag tttgggaatt tgggaataat aaaccagtaa
     6241 gccacaggca cagttaaatg agtctctgcc tgtcaatcgg aaatactcgt gctagacaac
     6301 ttcaaaattg tttacagtca attgtgtgct agacaacttc atttttattt atttatttat
     6361 cagaacgagg cttttcttga tatattttac tatagtctta aaactttgtg taatgtattt
     6421 attcgtcatt atttttatag aatccttata aaaattaaca cgtttttatg aa
//
LOCUS       XM_071829455            6397 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RPS4B-like (LOC139839393), transcript variant X2, mRNA.
ACCESSION   XM_071829455
VERSION     XM_071829455.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6397
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6397
                     /gene="LOC139839393"
                     /note="disease resistance protein RPS4B-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839393"
     CDS             524..6154
                     /gene="LOC139839393"
                     /codon_start=1
                     /product="disease resistance protein RPS4B-like isoform
                     X2"
                     /protein_id="XP_071685556.1"
                     /db_xref="GeneID:139839393"
                     /translation="MMSYEPSSASSSITISKGYDVFLSFRGEDTRTGFTSHLYDALIR
                     KHIRTYQDDKSLEIGNFIAPELLRAIEASKFAIVVLSPHFATSKWCLEEIVKIVDCRE
                     LGKLVVIPVFYHVSPSDVRLQRGCYVQGFTNHEVNPEIPPQKVETWKAAFKKLGDISG
                     YHVTQHRKESEVVNEIVKKIFTDMQVTLPTSLPDGLVGIESRLNEVKRILNMESSEVR
                     FIGICGMSGVGKTTLAEVVYEAIQNEFQESSFIENIKDISKERNTDLCKLQQKLLDDI
                     LKGESVPVRSVKHGQTLLKTKLRDLKVIIVLDDVNHEDQLTYLAGGREWFGNGSRIII
                     TTTNTDLLNPHRINATYVCEELEGDEALSLFCQSAFGGHPTNGYDNLSKDIVKLAGGL
                     PLALNVYGSLLCGKEERYWKEILKKFQEYPHKKVVERLEIGYARLDKDEQDTFRYIAC
                     FLKGRDKDLIKDILTDIGLYPECGIADLINKFLITYNHDDSIWMHDLLQQMCWEILRK
                     DSERDNGKYIAIKRRQDIVDILTYRPKGMRTIEIINQEPCKVEEEVFFDDPKCFSKML
                     KLRFLRISNIRFSQGLNYLSNDLRILECQLETLWEKDLDLPNLTSINLSFSTNLIKIP
                     DLTSTPKLLILNLEGCTNVKELHDSVLVQKRLQYLNLKGCELLQNLGGCIMEMDSLET
                     LILSGCSNLDYIPEFGLNMKHLEHLYVNGTNIKKLPESLGKMCNLRKIDVSETSIEEI
                     PSSTHQLKKLRFLHVHRCMLLSPCRGFLYTNLDTVSYIREIDLSYCNLSAVPEGIGLL
                     YRLVRLDLSGNDFVLLPASISLLSNLKMLYLNNCKRLQSLPKLSIVNEESLYGLQIRF
                     NYYISGEVVDFSRFNASSDNGSPTVSCFNCPRLAENESGSYLVDRILNSYLQLRTNYW
                     ITPAAVFEIVGAGSKIPSSFKLITSAVNVILEGPWIGVAICAVIAVHQIDASMDAAKY
                     TVTAHIHVGEKHWMIPFPISFLMASVEENQLVFYWTDSDDLLRIVDSRQENNFGFSFS
                     VEPDGNVEVTKFGVRFIREEDIFEHEDSASDVANFLFKSSHKVRWSRGTREAVTDHHR
                     HSCHSAMRTIKFLFECRKELYSLDDIHKILKCLSEITQHVFVECKKEWRHAQLITLVY
                     DYYRISQGISQLYKEFVVLLKNVSYGWLSLTFALEQMVAKGRTDDCTYQEMIKQLNDL
                     EAAECVRFSDSFIKLLAYICKQIFDYSGHLKKNNIQKVNKEFDLFMTLTQVSSITLAG
                     VDRILGAYAIKDMLDDTTTLDTDSFTLGDETTNKLSEQQHTTTFSSYLFGSLKKQRGE
                     AGEARVSCLVNGCAADLNSCTEYHRRHRVCKTHSKSRVVTINGKEQRFCQQCSRFHSL
                     GEFDKLKRSCRKRLDGHNRFSRSLRRQSLYWNDGSSFTNHQVDRSENRLAGRFGRGFR
                     ILDFYDNAVLVQELKMKMGRLNSFTNEGEVEMMTVIDKLHNKTDDLAKTIEDMSIHAC
                     KFSHDVVEAGVTLNQFIAGGSLQVTQFGVQFVFDEEANCANSMCEEAMTILFRAVSSL
                     PTDLRWYIRACEAADSSLLSCHSTIIHDNTRNIINFITVGRATSVHQIHEIVNCVLGN
                     NLEAFKVLSECKEEWRLRAPLFSMVTSYYDVCRETCRLYNDFVMLLKDVSDGLLSLKL
                     EVEQIRVKIKEEKYTYKEMLQHLNGIKTTATYICFSGNIVKSFAHVCTQTVTFASLFD
                     EVIQEFTSVKILAQVSSGLVAGVFSIMCALMVGYFVTEGRQDDLESVWLHLIRTFSLS
                     GFLSMCDRLVTSYKSWSIGEFSDIDSHLGGLKFNLAKLTYFTEEHTVVVIDELNSLMT
                     KIDNIMVSIEYESIHAHKYKLDIMEAGTSLGIWE"
     misc_feature    578..>3088
                     /gene="LOC139839393"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
     misc_feature    2225..2347
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2348..2416
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2417..2488
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2561..2632
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2633..2701
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2702..2770
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2771..2854
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2855..2923
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2924..2992
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2993..3058
                     /gene="LOC139839393"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3851..>4309
                     /gene="LOC139839393"
                     /note="Protein of unknown function (DUF677); Region:
                     DUF677; cl21731"
                     /db_xref="CDD:451372"
     misc_feature    4505..4738
                     /gene="LOC139839393"
                     /note="SBP domain; Region: SBP; pfam03110"
                     /db_xref="CDD:460809"
     polyA_site      6397
                     /gene="LOC139839393"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acagactcta actctatcac agataaaaat gacctaatta taaattctat cttataaacg
       61 tcttaaatta gatcctcaaa ccacacactg gttgaaagct cggatgtgat cacgagaata
      121 tcaattagcc tacacaaagt taaacatcga agtgcttatt cgttatacac gcagttaaaa
      181 tgatgttaat agacttgttg accgcagaag ttgttgaccg ttgaaatttg aaccctaatc
      241 ctgatttgta gtcgatccat ggtcaatttt cactcccaaa accctaacat ctcacttcct
      301 ctatcggatt cgattatgat tcagccgttc aactcttcac gagagtttat gtttcagaat
      361 tcgcctcttt gttgagatcg tacataatca ttgtgagctg tagagatgat gtcttataca
      421 taatcatcat cgtcaacatc atctaagaca agagtttcaa acggttatga tattttcata
      481 attatagatc gtacatgatc atactgagct gtagactgta gagatgatgt catatgaacc
      541 atcatcagca tcatcttcaa ttacaatttc taaaggttat gatgtttttt tgagctttcg
      601 aggggaggac actcgtactg gtttcactag ccatttgtat gatgctttaa tccgcaaaca
      661 catcagaacc taccaagatg ataagtcact agaaattggg aattttattg ctcctgagct
      721 cctacgcgct atagaagcat caaaatttgc catagtggtt ttatcgcccc attttgcaac
      781 atcaaaatgg tgtttggagg aaatcgttaa gattgttgat tgtagggagt taggcaagct
      841 ggttgttatt cctgtttttt accatgtgtc tccctcggat gtacgccttc aaagaggctg
      901 ttacgtacaa ggcttcacta atcatgaagt aaatcctgaa attccacctc agaaggtgga
      961 aacttggaaa gcggctttca aaaagttggg tgatatctcg ggatatcacg tgacacaaca
     1021 taggaaagaa tcagaggttg taaatgaaat tgtaaaaaaa atcttcacgg acatgcaagt
     1081 taccttacca acgtctcttc ctgatggcct ggtgggaatc gaatcacgat taaatgaggt
     1141 gaagagaatt ttaaatatgg aatcttctga agttcgtttt atagggattt gtgggatgag
     1201 tggagttgga aaaactactc ttgctgaagt tgtttatgag gctattcaaa atgaatttca
     1261 agaaagtagc tttattgaaa acatcaaaga catttccaag gaacgtaata cagatttatg
     1321 caagctccag caaaaactcc ttgatgacat tttgaaaggg gaaagtgtac ctgtacgaag
     1381 tgttaagcat ggacaaactt tgttgaagac gaagctacgt gatttgaagg ttataattgt
     1441 tttggatgat gttaatcatg aagaccaatt aacgtatttg gctgggggac gtgaatggtt
     1501 tggaaatggc agcagaatca taataaccac aacaaataca gacttgctga atccacatag
     1561 aataaatgca acatatgttt gtgaggaatt ggaaggtgat gaagctctta gtctcttttg
     1621 tcagtcagca tttggaggac atcctacaaa tggttatgac aacttgtcga aagatattgt
     1681 gaagcttgct ggtggtcttc cgctagctct taatgtttac ggttctctat tatgtggaaa
     1741 agaagaaaga tattggaaag agatattgaa gaaatttcaa gaatatccac ataaaaaagt
     1801 ggttgaaaga cttgaaatag gttatgctag gctagataaa gatgagcagg atacattcag
     1861 atatattgcg tgtttcttga aagggagaga caaagatttg ataaaagata tactaacaga
     1921 tattggtttg taccctgagt gtggaatcgc tgatcttatc aacaagtttc ttataactta
     1981 taatcatgac gatagcatct ggatgcatga tcttctccaa caaatgtgct gggaaattct
     2041 tcgtaaggac tcagagagag acaatgggaa gtacattgca atcaaacgtc gtcaagatat
     2101 tgtagatatc cttacataca gaccaaaggg gatgagaaca atcgaaatca tcaaccagga
     2161 gccatgtaag gttgaagagg aagttttctt tgatgatcct aaatgtttct ctaagatgtt
     2221 gaaactcaga tttttaagga ttagtaatat acgattctct caaggtctta actatctttc
     2281 caatgatctc cggattctgg aatgccaact tgaaacactt tgggagaaag atctggatct
     2341 gcctaatttg acatctatta acctcagttt ttctacgaat ttgattaaaa ttccagactt
     2401 gacatcaacc ccgaaactat tgatattaaa tcttgaaggc tgcacaaatg tgaaagagct
     2461 tcatgattcg gttcttgttc agaaaaggct acaatacttg aatctgaaag ggtgtgagct
     2521 tcttcaaaac cttggtgggt gcattatgga aatggattct cttgagacac ttattttatc
     2581 tggctgctct aatctcgatt atattcctga atttggactg aacatgaaac acttggagca
     2641 tctgtacgtg aatggaacta acatcaagaa attgccagaa agtttgggga aaatgtgtaa
     2701 tttgaggaag attgatgtga gtgaaacttc aatagaagag ataccctctt ccacgcatca
     2761 gctgaagaag ttaagattcc tacatgttca cagatgcatg cttttatccc catgcagagg
     2821 ttttctgtat acaaatctgg atacagtatc atatatacga gaaattgatt taagttattg
     2881 taatctatct gctgtgcctg aaggtattgg tttgttgtat cgtttagtaa ggctggatct
     2941 ttctggaaat gattttgttt tactgccagc aagtatcagt ctcctttcaa atcttaaaat
     3001 gctttatctg aataattgta agaggctcca gtcattacca aagctttcca tagtaaacga
     3061 ggagtcactc tatggacttc agatcagatt taattactat atttcaggag aagtggtaga
     3121 cttttctagg tttaatgcct caagcgacaa tggtagtcca acggtgtctt gtttcaactg
     3181 cccaagacta gcagagaatg aaagcggtag ttatctggtg gacagaatat tgaatagtta
     3241 tcttcagtta cgaacgaatt actggattac accagcagct gtatttgaga tagttggggc
     3301 gggaagcaag attccatcaa gctttaaact gataacatct gctgtaaatg tgatcctcga
     3361 aggcccatgg attggggtgg ctatatgtgc tgttattgcc gtccaccaaa ttgatgcttc
     3421 tatggacgcc gccaaataca cagtaacagc tcatatccat gttggagaaa aacattggat
     3481 gattcccttt cccataagtt ttttgatggc aagtgtggag gagaaccaat tggtttttta
     3541 ctggacagat tctgatgact tactacggat tgtagattct cgccaagaga acaactttgg
     3601 tttctcattt agcgttgagc cagatggtaa tgtggaggtt acaaagtttg gagttcgttt
     3661 tatacgtgag gaagacatat ttgaacatga agattctgct agtgacgtcg caaactttct
     3721 gtttaaatct agtcataaag tgcgatggtc tagaggtacc cgtgaagctg ttacagacca
     3781 ccatcgccat tcctgtcatt cggccatgag gacgataaaa tttctttttg aatgccgaaa
     3841 agaactttat tccttggatg acatccataa aatccttaaa tgtctaagtg aaatcaccca
     3901 acatgttttt gttgaatgca aaaaagagtg gagacacgca cagttaatta ctctagttta
     3961 tgactattat cgaatcagtc aaggaatctc tcaactttac aaagagtttg tggtgttgct
     4021 caaaaacgta tcgtatggct ggttgagtct aacctttgca ttggagcaaa tggtggcaaa
     4081 aggcagaaca gacgattgta cttatcaaga gatgataaaa cagcttaatg atcttgaagc
     4141 tgctgaatgt gttagatttt ctgatagttt tatcaagttg ttggcttata tctgtaagca
     4201 aatatttgat tattcaggac atctgaaaaa aaataatatc caaaaagtaa ataaagagtt
     4261 cgatttattc atgacattga cgcaagtgtc aagcataaca cttgcaggag ttgaccgtat
     4321 tctgggcgca tacgcgatca aagatatgtt ggatgatact acgactttgg atacagattc
     4381 tttcacattg ggagatgaga caacgaacaa gttgagtgag caacaacata caacaacatt
     4441 ttcatcatat ctttttggtt cattgaaaaa acaaagaggg gaggctggtg aggcgcgtgt
     4501 atcatgttta gtaaatggat gtgcagcaga ccttaacagt tgcacagagt atcatcggcg
     4561 ccatagagtt tgtaaaactc attctaagtc acgtgttgtc acaataaatg gcaaagaaca
     4621 aaggttttgc cagcaatgca gtagattcca ttcacttggt gagtttgata aattgaagag
     4681 gagttgcaga aagcgtcttg atgggcacaa caggtttagt aggagcctga ggagacaatc
     4741 cctgtattgg aatgatggga gctcgttcac taatcatcaa gttgatagga gtgaaaaccg
     4801 tttggctgga cgttttggaa gaggattcag gatcttggat ttctatgata atgcagttct
     4861 tgtacaagag ttgaagatga agatgggtcg acttaattct tttacaaatg agggtgaggt
     4921 ggagatgatg actgtgatag ataagcttca taacaagacg gatgacttgg caaagactat
     4981 cgaggatatg agtattcatg cttgtaaatt cagtcatgat gtagtggagg caggagtaac
     5041 cttgaatcaa tttattgcag gaggtagttt acaggtgact cagtttggag ttcaatttgt
     5101 gtttgatgaa gaggcaaatt gtgcaaattc tatgtgtgag gaggcaatga ccattctgtt
     5161 tcgtgctgtt tcatctcttc ctactgatct gcggtggtat atacgtgctt gtgaagcagc
     5221 tgattcaagc ctcctctcat gtcattcaac catcatccat gacaacacac gcaatataat
     5281 aaatttcatt acggtaggac gggcaacgtc cgtgcatcag atccatgaaa tcgttaattg
     5341 tgtacttgga aacaacctag aagctttcaa ggtcttaagt gagtgcaagg aagaatggag
     5401 gctgcgtgca ccattatttt cgatggtaac tagctactat gatgtatgcc gtgaaacctg
     5461 ccgactttac aatgattttg taatgctgct gaaagatgta tctgatggct tgttgagtct
     5521 aaagttagag gtggagcaaa ttcgggtgaa gatcaaagag gaaaaataca cctataaaga
     5581 gatgctacag cacctcaatg gtatcaaaac aactgctaca tatatttgct tttctggtaa
     5641 cattgtcaag tcatttgcgc atgtatgtac ccaaacagtt acttttgcaa gtttgttcga
     5701 tgaagtaatt caggagttta cgtcggtgaa gatattagca caagtttcaa gcggattggt
     5761 tgcaggtgtt tttagtataa tgtgtgcttt aatggttggc tactttgtaa cggaaggaag
     5821 acaagacgac ttagagtctg tgtggttaca tttaatccga actttttcat tgagtggttt
     5881 cttaagcatg tgtgaccggc tggttacgag ttataaaagc tggtcgatag gtgaatttag
     5941 tgacatagat tctcatctag gtggattgaa gtttaacttg gcaaagctta cttatttcac
     6001 tgaagaacat acggtggtgg ttatcgatga actaaattca ctcatgacga agatagataa
     6061 catcatggtg agtattgaat atgagagtat ccatgctcat aaatataagc ttgatataat
     6121 ggaggcagga acaagtttgg gaatttggga ataataaacc agtaagccac aggcacagtt
     6181 aaatgagtct ctgcctgtca atcggaaata ctcgtgctag acaacttcaa aattgtttac
     6241 agtcaattgt gtgctagaca acttcatttt tatttattta tttatcagaa cgaggctttt
     6301 cttgatatat tttactatag tcttaaaact ttgtgtaatg tatttattcg tcattatttt
     6361 tatagaatcc ttataaaaat taacacgttt ttatgaa
//
LOCUS       XM_071829456            2581 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter G family
            member 22-like (LOC139839394), transcript variant X1, mRNA.
ACCESSION   XM_071829456
VERSION     XM_071829456.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2581
                     /gene="LOC139839394"
                     /note="ABC transporter G family member 22-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139839394"
     CDS             44..2239
                     /gene="LOC139839394"
                     /codon_start=1
                     /product="ABC transporter G family member 22-like isoform
                     X1"
                     /protein_id="XP_071685557.1"
                     /db_xref="GeneID:139839394"
                     /translation="MEKPNSNFGLWRTQSDQLPQLSSEASGGVESVGTHSRKSSRQMV
                     LASPGRNSSSSKNSHIRKTRSAQMKFEIDDVGSGAALSRASSASLGFSFSFTGFTMPP
                     DEVADSGSFSDADTPEDLEAGTRKKFQTEPTLPIYLKFTEVTYKIIIKGITSSVEKDI
                     LNGISGSVNPGEVLALMGPSGSGKTTLLSLLGGRLTDPTPGGAITYNDQPYSKFLKSR
                     IGFVTQDDILFPHLTVKETLTYAALLRLTRKLTKQEKEKRAADVIRELGLERCQDTMI
                     GGSFVRGVSGGERKRVCIGLEIIINPSLLFLDEPTSGLDSTTALRIIELLSDIAETGK
                     TVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGQASEAMLYFSSIGCSPMIAMNPAEFL
                     LDLANGNMTEVSVPSELEDRVQLDSSQREKKSGKHTPALVHDYLVEAYETRVAEETKK
                     QLMISAPIDEDIKSNVGSLKREWGASWSQQYMILFKRGLKERQHEYFSWLRITQVLVT
                     AIILGLLWWQSEVHSPKELDNQAGLLFFIAVFWAFFPVFTAIFTFPQERAMLNKERAA
                     DMYRLSAYFMARTTSDLPLDLFLPTLFLVVVYFMADLRQTAESFFLTMVIVFLCIVAA
                     QGLGLAIGATLTDLKKATTLASVTVMAFMLSGGYFVKNVPIFIAWLRYLSFNYHTYRL
                     LLKVQYETISPVIDGIKLDTGMKEAVALGIMVFGYRFLAYLSLRRMKVG"
     misc_feature    446..2230
                     /gene="LOC139839394"
                     /note="ABC transporter G-25; Provisional; Region:
                     PLN03211"
                     /db_xref="CDD:215634"
     polyA_site      2581
                     /gene="LOC139839394"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacaataagt cttcattctc ttttgatttt cctttggtaa aagatggaga aaccgaattc
       61 caattttggg ttatggcgaa cacaatccga tcaactcccc caattgtcaa gtgaagcaag
      121 tggtggcgtg gaaagtgttg gaacacattc aagaaagtct agcagacaaa tggttcttgc
      181 gtcccccggg cgaaatagta gtagtagcaa aaactcacac attagaaaga caaggagtgc
      241 tcaaatgaaa ttcgaaatcg atgatgttgg tagtggggcc gctttaagcc gagcttcgag
      301 tgctagctta gggttctcat tttccttcac tggatttacc atgccacccg atgaagttgc
      361 ggactccggt tcttttagtg acgccgacac accagaagac cttgaagcag gcacacgtaa
      421 gaaatttcag acagaaccca ccttgccaat atatctgaag tttacagaag tgacatataa
      481 gataataatt aaaggaatta cgtcgtcagt agagaaggat attttgaatg gaataagtgg
      541 ttcggtgaat cctggtgaag tattggcgtt aatggggccc tcaggaagcg gaaaaactac
      601 gcttttaagt ttactcggcg gcaggctgac agatcctacg ccagggggag cgatcactta
      661 caatgatcag ccatactcca aattcctaaa gagcaggatt gggtttgtga ctcaagacga
      721 tatcttgttt cctcatctaa ctgtgaagga aacattaacg tatgcagctc tactacgtct
      781 aacaaggaaa ttaacgaaac aagaaaaaga aaaacgagca gcagatgtca tacgtgaact
      841 tggattagaa aggtgccagg atacaatgat cggtggctcc tttgttcgag gagtttcagg
      901 tggcgaaagg aagcgtgttt gtatcggact cgaaataata atcaatccgt cgctcttgtt
      961 ccttgatgaa ccaacctctg gcttggattc tacaactgct ttgaggatca ttgaactatt
     1021 atcagacata gccgagacag ggaagacagt ggtgacaaca attcatcagc catcaagcag
     1081 actgttccac aaattcgaca agctaatact tctaggaaaa ggaagcttgc tttactttgg
     1141 tcaagcgtca gaagcaatgt tatatttttc atcgatcgga tgttctccga tgatcgccat
     1201 gaatcctgca gagttcttgt tagatctcgc aaacggaaac atgacggaag tttcagttcc
     1261 ttcagagcta gaggacagag tacaattaga cagttcacaa agagagaaaa agagcgggaa
     1321 acacacaccg gcacttgttc atgattattt agtggaagcc tacgagacaa gagtggctga
     1381 agaaacaaag aagcagctca tgatttctgc accgattgat gaagatataa agtcaaacgt
     1441 tggatcgttg aaacgcgaat ggggagcaag ctggagtcag caatatatga tattgttcaa
     1501 gagaggactt aaagaaaggc aacatgaata ctttagttgg ttgagaatta cacaagtttt
     1561 agtaactgca atcattttag gacttttatg gtggcaatca gaagttcata gtcctaaaga
     1621 actcgataat caagctggat tgttgttctt cattgctgtg ttttgggcat tttttccagt
     1681 atttacggct atattcacat ttcctcaaga acgagcgatg ctaaataaag aaagagcagc
     1741 agatatgtac agattaagtg cgtattttat ggcaaggaca acaagtgatc tcccacttga
     1801 tttgtttctt ccgacgcttt ttcttgttgt tgtttatttc atggcggatt tgcgacaaac
     1861 tgctgaatcg ttttttctaa ccatggttat tgtcttctta tgcatcgtcg cagctcaggg
     1921 acttggactc gctattggtg caacacttac ggacttaaag aaagcaacga ctctagcttc
     1981 tgtaaccgtt atggccttca tgttgtctgg tggatatttt gtgaagaatg ttccaatatt
     2041 catagcatgg ttacgttact tgtcgttcaa ctatcacacg tacagactac ttttgaaagt
     2101 gcaatacgaa actatcagtc cagtaatcga tggaataaaa ttagacactg gtatgaagga
     2161 agctgttgcc ctgggaatca tggttttcgg ctaccgtttt ttggcgtact tatctttacg
     2221 tagaatgaaa gttggttaaa gtatttgaat attttgatgg gcaagtgtca taaaatacag
     2281 tttttggcta aattaagtag tattcagagt aagtaactgg aagaagaatc tcagaattgt
     2341 gttatgaagt tgtgaaatca cgatgcagaa aggaaaagct tatttgctat ttgtaggcca
     2401 tcatggggtg taagttgtaa ccaacaaatt tgatgatttt gatgttgctg atctttgtaa
     2461 ttgacatcag aacaagtgat ttttgtatgg actataagac ataaagataa tgcacttcat
     2521 tagttaagtt ggattatatc atgttatata gttataatag tgtgagtgct tgtgtgtaca
     2581 a
//
LOCUS       XM_071829457            2255 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter G family
            member 22-like (LOC139839394), transcript variant X2, mRNA.
ACCESSION   XM_071829457
VERSION     XM_071829457.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2255
                     /gene="LOC139839394"
                     /note="ABC transporter G family member 22-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139839394"
     CDS             246..1913
                     /gene="LOC139839394"
                     /codon_start=1
                     /product="ABC transporter G family member 22-like isoform
                     X2"
                     /protein_id="XP_071685558.1"
                     /db_xref="GeneID:139839394"
                     /translation="MGPSGSGKTTLLSLLGGRLTDPTPGGAITYNDQPYSKFLKSRIG
                     FVTQDDILFPHLTVKETLTYAALLRLTRKLTKQEKEKRAADVIRELGLERCQDTMIGG
                     SFVRGVSGGERKRVCIGLEIIINPSLLFLDEPTSGLDSTTALRIIELLSDIAETGKTV
                     VTTIHQPSSRLFHKFDKLILLGKGSLLYFGQASEAMLYFSSIGCSPMIAMNPAEFLLD
                     LANGNMTEVSVPSELEDRVQLDSSQREKKSGKHTPALVHDYLVEAYETRVAEETKKQL
                     MISAPIDEDIKSNVGSLKREWGASWSQQYMILFKRGLKERQHEYFSWLRITQVLVTAI
                     ILGLLWWQSEVHSPKELDNQAGLLFFIAVFWAFFPVFTAIFTFPQERAMLNKERAADM
                     YRLSAYFMARTTSDLPLDLFLPTLFLVVVYFMADLRQTAESFFLTMVIVFLCIVAAQG
                     LGLAIGATLTDLKKATTLASVTVMAFMLSGGYFVKNVPIFIAWLRYLSFNYHTYRLLL
                     KVQYETISPVIDGIKLDTGMKEAVALGIMVFGYRFLAYLSLRRMKVG"
     misc_feature    246..1904
                     /gene="LOC139839394"
                     /note="ABC transporter G-25; Provisional; Region:
                     PLN03211"
                     /db_xref="CDD:215634"
     polyA_site      2255
                     /gene="LOC139839394"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctttatgaaa ccatttaggc tgatgttgaa tttgtgtata taaacagatt aatttcttta
       61 gtatctattt ggattttgga caggcaagga aggaagttta ttaatgagat caattcaacc
      121 caatcattgg acagtttaca gaagtgacat ataagataat aattaaagga attacgtcgt
      181 cagtagagaa ggatattttg aatggaataa gtggttcggt gaatcctggt gaagtattgg
      241 cgttaatggg gccctcagga agcggaaaaa ctacgctttt aagtttactc ggcggcaggc
      301 tgacagatcc tacgccaggg ggagcgatca cttacaatga tcagccatac tccaaattcc
      361 taaagagcag gattgggttt gtgactcaag acgatatctt gtttcctcat ctaactgtga
      421 aggaaacatt aacgtatgca gctctactac gtctaacaag gaaattaacg aaacaagaaa
      481 aagaaaaacg agcagcagat gtcatacgtg aacttggatt agaaaggtgc caggatacaa
      541 tgatcggtgg ctcctttgtt cgaggagttt caggtggcga aaggaagcgt gtttgtatcg
      601 gactcgaaat aataatcaat ccgtcgctct tgttccttga tgaaccaacc tctggcttgg
      661 attctacaac tgctttgagg atcattgaac tattatcaga catagccgag acagggaaga
      721 cagtggtgac aacaattcat cagccatcaa gcagactgtt ccacaaattc gacaagctaa
      781 tacttctagg aaaaggaagc ttgctttact ttggtcaagc gtcagaagca atgttatatt
      841 tttcatcgat cggatgttct ccgatgatcg ccatgaatcc tgcagagttc ttgttagatc
      901 tcgcaaacgg aaacatgacg gaagtttcag ttccttcaga gctagaggac agagtacaat
      961 tagacagttc acaaagagag aaaaagagcg ggaaacacac accggcactt gttcatgatt
     1021 atttagtgga agcctacgag acaagagtgg ctgaagaaac aaagaagcag ctcatgattt
     1081 ctgcaccgat tgatgaagat ataaagtcaa acgttggatc gttgaaacgc gaatggggag
     1141 caagctggag tcagcaatat atgatattgt tcaagagagg acttaaagaa aggcaacatg
     1201 aatactttag ttggttgaga attacacaag ttttagtaac tgcaatcatt ttaggacttt
     1261 tatggtggca atcagaagtt catagtccta aagaactcga taatcaagct ggattgttgt
     1321 tcttcattgc tgtgttttgg gcattttttc cagtatttac ggctatattc acatttcctc
     1381 aagaacgagc gatgctaaat aaagaaagag cagcagatat gtacagatta agtgcgtatt
     1441 ttatggcaag gacaacaagt gatctcccac ttgatttgtt tcttccgacg ctttttcttg
     1501 ttgttgttta tttcatggcg gatttgcgac aaactgctga atcgtttttt ctaaccatgg
     1561 ttattgtctt cttatgcatc gtcgcagctc agggacttgg actcgctatt ggtgcaacac
     1621 ttacggactt aaagaaagca acgactctag cttctgtaac cgttatggcc ttcatgttgt
     1681 ctggtggata ttttgtgaag aatgttccaa tattcatagc atggttacgt tacttgtcgt
     1741 tcaactatca cacgtacaga ctacttttga aagtgcaata cgaaactatc agtccagtaa
     1801 tcgatggaat aaaattagac actggtatga aggaagctgt tgccctggga atcatggttt
     1861 tcggctaccg ttttttggcg tacttatctt tacgtagaat gaaagttggt taaagtattt
     1921 gaatattttg atgggcaagt gtcataaaat acagtttttg gctaaattaa gtagtattca
     1981 gagtaagtaa ctggaagaag aatctcagaa ttgtgttatg aagttgtgaa atcacgatgc
     2041 agaaaggaaa agcttatttg ctatttgtag gccatcatgg ggtgtaagtt gtaaccaaca
     2101 aatttgatga ttttgatgtt gctgatcttt gtaattgaca tcagaacaag tgatttttgt
     2161 atggactata agacataaag ataatgcact tcattagtta agttggatta tatcatgtta
     2221 tatagttata atagtgtgag tgcttgtgtg tacaa
//
LOCUS       XM_071829458             854 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides agamous-like MADS-box
            protein MADS2 (LOC139839395), mRNA.
ACCESSION   XM_071829458
VERSION     XM_071829458.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..854
                     /gene="LOC139839395"
                     /note="agamous-like MADS-box protein MADS2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:139839395"
     CDS             45..794
                     /gene="LOC139839395"
                     /codon_start=1
                     /product="agamous-like MADS-box protein MADS2"
                     /protein_id="XP_071685559.1"
                     /db_xref="GeneID:139839395"
                     /translation="MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVA
                     LIIFSNRGKLYEFCSSSSMMKTLEKYHSCSYGSLKPNQPENENQYNYHEYLRLKARVE
                     VLQRSQRNLLGEDLAPLNTKELEQLEHQLEMSLRKIRSTKTGCMLDQLSELRRKEQVL
                     AETNKALKKMLEESAHEFPKQMWESGAQTIPYNPLPTHSDEFFQPLSLNTTMHNSFGG
                     LRYNPIGSDHEMTDGGVNENNSNGMFPGWML"
     misc_feature    48..278
                     /gene="LOC139839395"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; Region:
                     MADS_MEF2_like; cd00265"
                     /db_xref="CDD:238165"
     misc_feature    order(48..56,60..62,66..68,81..83,87..89,99..104,111..116,
                     120..125,132..137,141..146,156..158)
                     /gene="LOC139839395"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     misc_feature    order(105..107,126..131,138..143,147..152,159..161,
                     174..176,180..182,186..188,204..206,210..212,231..233,
                     240..245,252..254,261..266)
                     /gene="LOC139839395"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238165"
     misc_feature    222..224
                     /gene="LOC139839395"
                     /note="putative phosphorylation site [posttranslational
                     modification]; other site"
                     /db_xref="CDD:238165"
     misc_feature    288..560
                     /gene="LOC139839395"
                     /note="K-box region; Region: K-box; pfam01486"
                     /db_xref="CDD:460228"
ORIGIN      
        1 ctcgcaaata taaatatatt tttttataag taataataat tatcatggga agaggcagag
       61 ttgaactaaa gagaatagaa aacaaaataa acaggcaagt gacttttgct aagagaagaa
      121 atggtcttct taaaaaagct tatgaactct cagttctttg tgatgctgaa gttgctctta
      181 tcatcttctc aaaccgtggc aaactttatg aattctgtag cagctctagc atgatgaaaa
      241 cacttgagaa gtaccacagc tgtagttatg gatcattgaa acccaaccaa ccagaaaatg
      301 agaaccagta caactaccac gaatatctga gactaaaggc aagggtggag gttctacaac
      361 gatcacaaag aaacctacta ggagaagatt tggccccatt aaacaccaag gagctggagc
      421 aactggagca tcagttggaa atgtctttaa ggaaaattag atcaacaaag actgggtgca
      481 tgttggatca gctttctgaa ctccgaagaa aggagcaagt tcttgctgaa acaaacaaag
      541 ccttaaagaa aatgttggaa gaaagtgcac atgaatttcc gaaacaaatg tgggagagcg
      601 gtgcacaaac tatcccctat aatcctcttc ctacacattc cgatgagttc ttccagcctc
      661 taagtttgaa caccaccatg cacaacagct tcggtggatt gagatacaat cctatcggtt
      721 ccgatcatga gatgacagat ggcggtgtta atgagaacaa ttctaatgga atgtttccgg
      781 gctggatgct ctaattaata agacgaaatg tgctcataat tgacctaaag tttattaagg
      841 gtaattaaaa ataa
//
LOCUS       XR_011756942             553 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839396), ncRNA.
ACCESSION   XR_011756942
VERSION     XR_011756942.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..553
                     /gene="LOC139839396"
                     /note="uncharacterized LOC139839396; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839396"
     ncRNA           1..553
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839396"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839396"
ORIGIN      
        1 gggagcggca accctagagg gaacgccaac actaacggca acggcaacgg aaacactagc
       61 gggaacggca acactaaact cagtaaattt gagcttgtgc ttggatgctt tggtttaagc
      121 aacactcatg tggagaatgg aaatattact gttaatttga gtgacaacaa aaactcactg
      181 ggcatacatg aaaaattctc tgtattttcg gggttaaaaa aacgcgttcg gatcaagaaa
      241 actggtggaa gtgccagtgg cggtggaaat ggaagtggcg gtgcaagtgc cagtgacggc
      301 ggaagtgcta gtggcgatgg gagccgttta atttttagca tgtatatttg agtatctttt
      361 ttagcatcga gaatccaagt gcttgtttag ttatgtaatc actttctaag aggaattatg
      421 aagtaagagt tcagagatac aaagatctaa tgtttagatg taaaggaaaa atactctagc
      481 cgtttgacaa aaggcattat atgagctgtt ttttttttca tgtatgtttg acaaaaggca
      541 ttattctagc tat
//
LOCUS       XM_071829459             573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839397), mRNA.
ACCESSION   XM_071829459
VERSION     XM_071829459.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..573
                     /gene="LOC139839397"
                     /note="uncharacterized LOC139839397; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839397"
     CDS             1..573
                     /gene="LOC139839397"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685560.1"
                     /db_xref="GeneID:139839397"
                     /translation="MNALSVHVRKLPVTMLLEFFRAPVQQCILEHSNTTAGLTTPLTP
                     YAEHKLGKQNHKSLNWTVKLISKIILEVFDSRKGGKVNLAEQMCTCTQWQLSGLPCGH
                     VMVVARYFNQRDVTCHVQGYFTTETYKSAYEDEIHPLDHICEWEDPGSLPNIQPPVLK
                     KGNLVNQRVLNVYRPKEKRKKNLQENAVVA"
     misc_feature    262..333
                     /gene="LOC139839397"
                     /note="SWIM zinc finger; Region: SWIM; cl45927"
                     /db_xref="CDD:459272"
ORIGIN      
        1 atgaacgcat tgtcagttca tgtgaggaaa ctaccagtta caatgctact tgagttcttt
       61 agagctccag ttcaacaatg catcttggaa catagtaaca cgactgctgg tttaacaaca
      121 cctctaacac catacgcgga acataaattg ggtaaacaaa atcataagtc tttgaattgg
      181 acggttaaac tgatctctaa aataatatta gaggtgtttg atagtagaaa gggagggaaa
      241 gtgaatctag cagaacaaat gtgcacatgc acacagtggc agttgtccgg tctgccatgt
      301 ggacacgtga tggtagtagc aaggtatttc aaccaacgag acgtgacttg tcacgttcag
      361 ggatatttca ccactgaaac ttacaagtcc gcatatgagg atgaaattca cccgctagat
      421 catatttgtg aatgggagga tccaggaagt ttaccaaata tccaacctcc ggtgcttaaa
      481 aaaggcaatc tggtcaacca aagggtacta aacgtatacc gtccaaagga gaaaagaaaa
      541 aaaaatctac aagaaaatgc agtcgttgct tag
//
LOCUS       XM_071829460            2943 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839398), mRNA.
ACCESSION   XM_071829460
VERSION     XM_071829460.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2943
                     /gene="LOC139839398"
                     /note="uncharacterized LOC139839398; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839398"
     CDS             187..2505
                     /gene="LOC139839398"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685561.1"
                     /db_xref="GeneID:139839398"
                     /translation="MEERNMECDCAPVKKRKLSENQVSQSESNKKPNLVAQNENGIST
                     CTRVETSNAVDVINQDDECNNVVKDGRMEGSQVDCFDLELESNESKNTIGSEGSVLTT
                     DELSNNTESQINSLTKLDLDANKESASQVTIEDNSRSHSKKKLLVLDVNGLLVDIVLN
                     PDPAYKADSMLGAKAVFKRPYCDEFLKFCFERFNVGVWTSRTRRNIERVLDFLMKDTQ
                     RQLLFCWDQSHCTETGFNTIENTGKPLVLKELKKLWEKHDPNLPWDKGVYNESNTLLL
                     DDSPYKALRNPPHTAIFPHTYQYRDTQDNDLGPNGNLRNYLERLAASDDVQKYIEQNP
                     FGQLPISYNDKSWKFYLKVIGATEPEVGPSRSRKKLLVIDVSGLVVDVTVPREGYKAD
                     TIQGSRAVYKRPYCDEFLRFLFERFNVGIWTSMARRNMEWIVDFVLKDYQDKLLFCWD
                     RADCTDTGFRTVENIDKTLFLKELRMLWEKKDPDLPWKIGDYDKSNTLLIEHAPHKAL
                     LNPPHTAIFPYPYRYSMTEDNFLGPKGELRVYLERLASAEDVQKFVQENPFGQRPIRE
                     KNLSWGFYQKVIRAFSYKQVSNANGSHLKNSSVPKPGTTTDLVIPSLVESNTDSSTDA
                     VIPTVLKPETDTNTISTTQPLPEPETKTTIDLVGQTSLEPETDITTSVVGPTLFEPNS
                     ETVTVSAAPTSLEPEIDITNLVVAPTLLESKSDTSTALAAPTLREPNTETNSTTFAAS
                     TLLDPATETTAAASATITFNTTSDVADQTLSI"
     misc_feature    616..1167
                     /gene="LOC139839398"
                     /note="NLI interacting factor-like phosphatase; Region:
                     NIF; pfam03031"
                     /db_xref="CDD:397254"
     misc_feature    order(631..645,781..786,928..930,1015..1020,1027..1032)
                     /gene="LOC139839398"
                     /note="active site"
                     /db_xref="CDD:319823"
     misc_feature    1291..1839
                     /gene="LOC139839398"
                     /note="NLI interacting factor-like phosphatase; Region:
                     NIF; pfam03031"
                     /db_xref="CDD:397254"
     misc_feature    order(1306..1320,1453..1458,1600..1602,1687..1692,
                     1699..1704)
                     /gene="LOC139839398"
                     /note="active site"
                     /db_xref="CDD:319823"
     misc_feature    1954..>2409
                     /gene="LOC139839398"
                     /note="Family of unknown function (DUF5585); Region:
                     DUF5585; pfam17823"
                     /db_xref="CDD:465521"
ORIGIN      
        1 aaatgatatc caaacaaaaa aaccgtttaa atccctccct caatcaatct cttccgtctc
       61 cgccgttaat tatccaattc ccaaatcgga gctcctgttt tcgtcaatac tttttgcagg
      121 tttttttata ccaataaaag gagtgggcga tatcaatcaa aacacagact tacatcttat
      181 attagaatgg aggaaagaaa tatggagtgc gactgtgctc ctgtaaaaaa aagaaagtta
      241 agtgaaaatc aagtgagtca atctgaatcc aacaaaaagc caaacctagt tgctcaaaat
      301 gagaatggaa tttcaacgtg tactcgagta gaaacttcaa atgcagtaga tgttatcaac
      361 caagacgatg aatgtaataa tgttgttaaa gacggtcgaa tggagggttc ccaggttgac
      421 tgttttgacc ttgagctaga aagtaacgag agcaagaata cgattgggtc ggaaggatca
      481 gttttgacta ctgacgaact aagcaataat acagaatcac agattaattc tttaacaaaa
      541 ctggatctgg atgcaaataa agaaagtgcg agtcaagtta caattgaaga taatagtcgt
      601 tctcattcta agaaaaagct tcttgtccta gatgtaaatg ggctgcttgt tgatattgta
      661 ttaaacccag atccagccta caaagcagac tctatgttag gggcgaaagc agtgtttaag
      721 agaccatatt gtgatgaatt tttgaaattt tgctttgaga gattcaatgt aggtgtttgg
      781 acatcaagaa caaggaggaa tatagaacgg gttcttgatt ttctcatgaa agacactcag
      841 cgtcagttgc ttttctgttg ggatcaatct cattgtaccg agaccggttt taatactatt
      901 gagaacacag gaaagccctt ggtcttaaag gaacttaaaa agttatggga aaagcacgat
      961 ccaaatcttc cgtgggataa aggagtttat aacgaatcaa acacgcttct tttagacgat
     1021 tctccataca aggcgctgcg caaccctcca catactgcaa tctttcccca tacttaccag
     1081 taccgcgata cccaagataa tgatttagga cctaatggca accttcgtaa ttatctggaa
     1141 aggttggcag cttctgatga tgtccaaaaa tatatagaac aaaacccgtt tggccaacta
     1201 ccgatttcat ataacgataa atcatggaaa ttttatctta aggtcattgg tgccaccgag
     1261 ccagaagttg gtccgtctcg ttctaggaaa aaacttcttg ttattgatgt gtctgggtta
     1321 gttgtcgatg ttacggttcc acgtgaagga tataaagcag acacaattca agggtcgaga
     1381 gcagtgtata aaagaccata ttgtgatgag tttttacgat ttttattcga gagatttaac
     1441 gtaggtatct ggacatcgat ggccagaaga aatatggaat ggattgtaga ctttgttcta
     1501 aaggactatc aagacaaatt acttttctgt tgggatcgag ctgactgtac ggataccggc
     1561 ttccgtacag ttgagaatat tgacaaaacc ttatttttaa aggagcttag aatgttatgg
     1621 gaaaagaaag atccagatct accatggaaa ataggagatt atgataaatc aaatactctt
     1681 cttatcgaac atgctccaca caaggctctt ctaaatccgc cacatacagc aatctttcct
     1741 tatccttacc gttactcgat gacagaagat aatttcttag gaccaaaagg cgaacttcgt
     1801 gtttatcttg aaaggctagc atcagctgaa gatgttcaga agttcgtaca ggaaaatcca
     1861 tttggccaac gccccattag ggaaaaaaat ctatcatggg gattttacca aaaggttatc
     1921 cgtgctttct cgtataaaca agtatctaat gctaatggtt cccaccttaa aaactcgtct
     1981 gtaccaaaac ccggtactac tactgatctg gttattccat ccttagttga atcaaatact
     2041 gatagttcaa ctgatgcagt tattccaacc gtactgaaac cagaaaccga cactaataca
     2101 atatcaacta ctcaaccctt accggaacca gaaactaaaa ctactataga tttagttggt
     2161 caaacctcat tggaaccaga aaccgacatc acaacttcgg ttgttggtcc taccttattc
     2221 gaaccaaact ctgaaactgt taccgtttca gctgctccaa cctcattgga accagaaatt
     2281 gacattacaa atttggttgt tgctccaacc ttattggaat caaaatctga cactagtact
     2341 gctttggcag ctccgacttt gagggaacca aataccgaga ctaatagtac tacatttgct
     2401 gcttcaacct tgttggaccc ggcaactgag actactgctg ctgcttcggc tactataacc
     2461 tttaacacta cttctgatgt ggctgatcaa actttatcta tttaactatt aacggtgaaa
     2521 tgagtatacg tatcacattt ggcctgcacg taatttttga ccccatggca gtatgattac
     2581 ttgtaggact aattaaattt gtattcacat ttatgataga taatctagtc atagatagta
     2641 cttagtcttg tatccttttg tgttgttttt taccggattt tgtaaggtgg tactaataca
     2701 taacgaaaag atggaagttg gtagccaccc gtggcggcag tggtggtggt accaccaggt
     2761 tatgctttgt gagtagtctt tcatcggttc tttgatcaag ggcttgtgtt ccagttactt
     2821 atactagaac tggtaatctt ggattgacat ttgactcacg gagcatattg gagttggatc
     2881 gagattgcta caattgttcc aaagataaac ggtacgtttc taattttgta acattagata
     2941 taa
//
LOCUS       XM_071829461            1251 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GDSL esterase/lipase 5-like
            (LOC139839399), mRNA.
ACCESSION   XM_071829461
VERSION     XM_071829461.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1251
                     /gene="LOC139839399"
                     /note="GDSL esterase/lipase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839399"
     CDS             91..1251
                     /gene="LOC139839399"
                     /codon_start=1
                     /product="GDSL esterase/lipase 5-like"
                     /protein_id="XP_071685562.1"
                     /db_xref="GeneID:139839399"
                     /translation="MASTGFFFFFFIRMALVNICLPIIIIECHKIISVSTSNNNNGGG
                     GGAVFVFGDSFFDPGNNNYIKTSSLDQANFSPYGRTHFHFPTGRFSDGRIIPDFILEY
                     AKLPVISPYMAPNSQRFYKIGANFASAGAGALVETFQGSVISLETQIRYHKRVENRLR
                     KRYGDREARNTLSKAVYLFSIGTNDYLNPYMITNSTRFNPSYSNSHLVHIVIANLTIA
                     IKDLHKRGGRKFGFINLGPLGCLPGIRIIPNPTTDSGACIESASLLAKLHNQALANTL
                     ETLATQLQGFKYSLYDFHTNLEARLRHPFKYGYKQGKTACCGTGRFRGTFSCGGKRGV
                     KEFKVCEKPQEYVFWDSYHLTETTYKQMAHQMWNQKPASPGTYNLKTLFQLP"
     misc_feature    229..1194
                     /gene="LOC139839399"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; Region:
                     SGNH_plant_lipase_like; cd01837"
                     /db_xref="CDD:238875"
     misc_feature    order(250..252,478..480,640..642,1138..1140,1147..1149)
                     /gene="LOC139839399"
                     /note="active site"
                     /db_xref="CDD:238875"
     misc_feature    order(250..252,1138..1140,1147..1149)
                     /gene="LOC139839399"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     misc_feature    order(250..252,478..480,640..642)
                     /gene="LOC139839399"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
ORIGIN      
        1 tgatgtaaaa taacctgcgt gatttaaacc acgcacgcat acacacacag acacctctgg
       61 tagttagtta ttcgatctat ttgaattcta atggcatcga ctggattctt cttcttcttt
      121 ttcataagga tggccttggt taatatttgt ctaccaataa taataatcga atgtcacaaa
      181 attattagtg taagtactag taataataat aatggtggag gtggtggtgc ggtgtttgtg
      241 tttggagact cattttttga tcctggaaac aacaactaca taaagacaag cagtctggac
      301 caagctaatt tcagtccata cggtcgaaca catttccact tccccaccgg ccgcttttca
      361 gatggacgta tcattcccga ctttatcttg gagtatgcaa agttaccagt tatatccccg
      421 tatatggcgc caaacagcca aaggttttat aagattgggg ccaactttgc atcagcggga
      481 gcaggagctc tggtcgaaac ctttcaggga tcggtaatca gtcttgagac tcaaataagg
      541 tatcacaaga gagtggagaa tcgattgcga aaaagatatg gggataggga ggctagaaac
      601 acattgtcta aagctgtcta cttgttcagc attggaacta atgactactt aaatccttac
      661 atgatcacca attccacccg tttcaaccca tcctactcca actcccacct tgtacatatt
      721 gtcattgcca atttgactat cgcaatcaaa gatttgcaca aaagaggagg caggaaattt
      781 gggtttatca atttgggacc attaggttgt cttccgggca tcaggatcat tcctaatcca
      841 acaaccgact ccggtgcttg cattgaatcg gcttctttgc tagcaaaact acataaccaa
      901 gcactcgcca atacactaga aacattagca actcaactcc aaggattcaa atattcactc
      961 tacgacttcc ataccaatct agaggctaga cttagacatc cattcaaata cgggtataag
     1021 caagggaaaa cagcgtgctg cgggacaggg cgatttagag gaacattcag ctgtggaggg
     1081 aagagaggag tgaaagaatt taaagtgtgt gagaagcctc aagagtatgt gttttgggac
     1141 tcatatcatc taaccgaaac aacatacaaa caaatggctc atcaaatgtg gaaccaaaaa
     1201 cccgcctcac caggaactta caatctcaaa actttgttcc aattaccata a
//
LOCUS       XM_071829462            1511 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides benzyl alcohol
            O-benzoyltransferase-like (LOC139839400), mRNA.
ACCESSION   XM_071829462
VERSION     XM_071829462.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1511
                     /gene="LOC139839400"
                     /note="benzyl alcohol O-benzoyltransferase-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 46 Proteins"
                     /db_xref="GeneID:139839400"
     CDS             18..1403
                     /gene="LOC139839400"
                     /codon_start=1
                     /product="benzyl alcohol O-benzoyltransferase-like"
                     /protein_id="XP_071685563.1"
                     /db_xref="GeneID:139839400"
                     /translation="MAQIDTPLTFNVRRRAPELISPAKPTPRELKPLSDIDDQDGLRF
                     HIPGLQFYRSDPKMINKNPASVIREALAKVLVFYYPFAGRLKEGSARKLMVDCTGEGV
                     LFIEAEADVTLKQFGDALQPPFPCLEELLYDVPGSSSVLDSPLLLIQVTKLLCGGFIF
                     ALRLNHTMSDAPGIVQFMTGLGEMAQGASRPSTLPVWQRELLFARDPPRVTCTHNEYI
                     EVEDTKGTLIPLDDMAHRSFFFGPSEISALRRFVPSYLKKCSTFEVLTACLWRCRTIA
                     LQPDPEEEMRIICIVNARGKFNPPLPKGYYGNGFAFPVAISTAGDLSNKPLSHALELV
                     MKAKSDVTEEYMRSIADLMVIKGRPHFTVVRSYLVSDVTHAGFDVVDFGWGKAAYGGP
                     AKGGVGAIPGVASFYIPFTNHKGESGIVLPICLPSVAMDKFVKELDKMLAQDHNEQVL
                     QEHKLLVLARL"
     misc_feature    45..1331
                     /gene="LOC139839400"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     Region: PLN02481; cl23789"
                     /db_xref="CDD:355048"
     polyA_site      1511
                     /gene="LOC139839400"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacaacaaaa cacaagcatg gcacaaatcg acactccctt aactttcaat gtccgtagac
       61 gtgcaccaga gcttattagt ccagcgaaac ccacaccacg agaactaaaa cctctatccg
      121 acattgatga tcaagatggc cttcggtttc atatcccagg gcttcaattt tatcgtagcg
      181 acccaaaaat gataaataag aatccagcaa gtgtgattag agaggcttta gctaaggtgt
      241 tggtgtttta ttatccgttt gctggccgac tcaaagaagg gtcagccagg aaactgatgg
      301 ttgattgtac tggtgaaggt gtgttgttta ttgaggcgga agctgatgtc acgttgaaac
      361 aatttggtga tgcacttcaa ccgccgtttc cttgtttgga agagcttctt tacgatgttc
      421 caggatcaag tagtgttcta gattcaccgt tattgctgat tcaggtcaca aaattgttat
      481 gtggaggttt tatctttgct ttacgactta accataccat gagcgacgcc ccaggcatcg
      541 ttcaattcat gactgggctt ggtgaaatgg cacaaggtgc atcaagacca tcaacattgc
      601 ccgtgtggca aagggagttg ctttttgcaa gggacccacc acgcgtgaca tgtactcata
      661 atgagtatat tgaagtggaa gacactaaag gcacactcat tccactagat gacatggctc
      721 atagatcatt tttctttggt ccttccgaga tatcagcgct acgaagattt gttccatcat
      781 atctcaaaaa atgttccact tttgaggtct taaccgcttg cttatggcgt tgtcgtacca
      841 ttgcactcca accagatccc gaagaagaga tgcgcataat ttgcattgtt aacgcacgtg
      901 gaaagtttaa tcctccacta cccaaaggat attacggaaa tggtttcgct ttcccagtgg
      961 ctatctcaac ggctggagac ctgtccaaca aaccattaag tcacgcgtta gagctagtga
     1021 tgaaagctaa atctgatgtc accgaagagt acatgagatc aatagctgac ttaatggtaa
     1081 taaaaggacg cccccatttt acggttgtta gaagctacct tgtctctgac gtaactcatg
     1141 ctggatttga tgttgttgat tttgggtggg ggaaagcggc ctatggagga cccgcaaaag
     1201 ggggagtagg tgctatcccg ggtgtcgcta gtttctatat accttttaca aatcacaaag
     1261 gtgagtctgg aattgtgcta ccgatatgtt tgccgagtgt ggccatggat aaattcgtta
     1321 aagagttgga taagatgttg gctcaagacc acaacgaaca agttcttcaa gaacacaagt
     1381 tattagttct tgctagatta taattatctt tcttattttc tcgctgcagt taatggtttt
     1441 aagagtgctt atgtattata tgttgttctt aattgtgttt tagtctaata atatactaaa
     1501 ggattgtatg a
//
LOCUS       XR_011756943             434 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839401), ncRNA.
ACCESSION   XR_011756943
VERSION     XR_011756943.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..434
                     /gene="LOC139839401"
                     /note="uncharacterized LOC139839401; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839401"
     ncRNA           1..434
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839401"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839401"
ORIGIN      
        1 gaagctatac aatttgctcg atagggtttt gcaggattga agaataagac tttgaaacct
       61 tttgtttggt tagaggtatt gatcataagc tgttaatctc tactttttat aactaatatt
      121 atcttttttg attatgcaca ttaactgttt gctataatgc ttgaatgaac taattttgaa
      181 gattttttct cttttgaagt tcataaataa aaactgtaag atgggcagtg ttagtccagt
      241 atactttaaa ataggttggt ggcgttgaac tcgagcttat ggcaatagca actggtggta
      301 tcgttgttcc gaggttccag aaacttacac ctgacaagtt aaggaaggct ggtttggtta
      361 gggaaaaggc gtttggtaca acaaaagatc ggatgcttta tattgagcat tgtgcaaact
      421 aaagggctgt tacc
//
LOCUS       XR_011756944             406 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839402), ncRNA.
ACCESSION   XR_011756944
VERSION     XR_011756944.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..406
                     /gene="LOC139839402"
                     /note="uncharacterized LOC139839402; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839402"
     ncRNA           1..406
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839402"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839402"
ORIGIN      
        1 ttctaactaa ccacacgctt tctacttctt ctttaccctt tcttttattt tctctttttg
       61 cacccatttc attgacacac accttgcatt gcattctagt gtgacgctag cacgtgcccc
      121 attaatcttc tccggtattc ataggtatgg ctagcctgcc agggacaagc tatattgcat
      181 caagaagtaa aaaatttaaa gttgacaata tcttcaagaa ttcgtgcttt tgattgaaat
      241 ttatgtttga caagaaatgg attttactat caagattcgt tgatgttgtt catttctcag
      301 aattctctga gtttcttcga tatgatgtaa cttaattact cgtctcatga ttaactgaag
      361 tctcatgatt aactgaacat aacttatttg atgtgttgtg aaagta
//
LOCUS       XM_071829463            6742 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein
            PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (LOC139839403),
            transcript variant X1, mRNA.
ACCESSION   XM_071829463
VERSION     XM_071829463.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6742
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6742
                     /gene="LOC139839403"
                     /note="protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139839403"
     CDS             162..6152
                     /gene="LOC139839403"
                     /codon_start=1
                     /product="protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING
                     1"
                     /protein_id="XP_071685564.1"
                     /db_xref="GeneID:139839403"
                     /translation="MASKGPRSKLDHEAKAKRQKALEPPKEPRRPRTHWDHLLEEMVW
                     LSKDFESERKFKLALAKKVAIRASKGMVDQATRGERKVKEEELRMKKVALNISKDVKK
                     FWTKIEKLVQYKHRLELDQKKKKALDKQLEFLLGQTERYSTMLAENLVDSSSQPHVHS
                     SSVQERPAIEYIDQTDVNGRCESNNDESELNILETDEDYISENEPEDDEHTIEEDEAL
                     ITADERREELAALQNEVDLPLDELLARYAVGEATTDSPPEKTKDLGEVMQIHEDDLQC
                     NGNDKSDHTSKIESCQNDNSDHISKIESRHCVESNGGLSVSRHCHLEIKEHYVRKRKR
                     NQEGNKKYLQLDFHDEKEDGDFIVANGDDKDDETTLLEEEELAKAEHDDSIDEIALLQ
                     KESEISIEDLLARYRQDDVNNRSSDADSESEGASASENMSNSSGQRDTEADSSMNIQQ
                     IPTDEADLPVEIDPEKEIDMDEAADEGGDNEDRIADAAAAARSAQPTGNTFLTTNVRT
                     KYPFLLKFSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGI
                     WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWMKPHSFHVCITT
                     YRLVIQDSKIFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNTKRRILLTGTPLQNDL
                     MELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVDGQEKVNKEVIDRLHNVLRPFLLRR
                     LKRDVEKQLPSKHEHVIYCRLSRRQRNLYEDFIASSETQATLQSSNFFGMISVIMQLR
                     KVCNHPDLFEGRPIISSFDMNGIETQFCSSVCSVLAPSQFSTVDLCGLGFVFTHLDFD
                     MTSWESDEVQAIETPSRLIEARVEEDFKFVKKSNGFNIFEEIQRALHEERLNEMKERA
                     ASIAWWNSLKCKRKPVYSTGLRDILSIENRCQNPVSSKLAEIVLTPVDRFKQMEDQVE
                     SFMFAIPAARAPPPVGWCSKSGSSVFLNQTFKDKCSTLISPLLTPIRPAIVRRQVYFP
                     DRRLIQFDCGKLQELAVLLRRLKSEGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDG
                     STQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ
                     DRCHRIGQTREVHIYRLISEHTIEENILKKAKQKRALDDLVIQSGEYNTEFFKKLDPM
                     ELFTGHGTVSVNNMQKGKALANGSEADLPVSNADVEAALKHAEDEADYMALKRVEQEE
                     AVENQEFTEEPPIGRMEDDEILNEEDGDHGGLVTDNPQTPKRSDPNEETGMDLVKVEE
                     DDDVDMIDDVKQMAAAVASGQEILSFENQLRPIDRYAVRFLELWDPIVDNTVEIESQD
                     QFEGADWELDHIEKLKDDMEAEVDDDEEPLVYESWDSEFATKVYQEQVKALAEQQLIE
                     EREMELAREKELAREMELARERELADLKRIETAAKKSKTKKKAKKPKFKSLKHEALSC
                     DTRTTNIPSPIEFDDDLDDELIFVKKRKRVIIEDNTEFKSSKKSKKSKKKKSEPIPLD
                     LDSNSLTDHQDESKHLKLSNNLEVDHKPIINRSKTGLKISVTSMPLKRVMTIRLEKIR
                     KGSIWPNDCFPAPDSWLSSEDAVLCAIVHEYGVNWSLASDVLYGMTAGGLYRGIVRHP
                     VHCCERYRELVQRYVLSTSENLHNDKSGGKALVRVSEEHAKTLLDIVSEQPDQAYTLQ
                     KHFAHLLTSLWRSTNCSSRLKTLKSERFRDPQLQDMKFTNVNAMSRLVADALETSQNI
                     PREETLSSFSERYHNSRGVVSELAVTLQFPSRTNDDDPNVPLPSVVPVSVNDTESSSS
                     ENVPMGGNHLFRTCKDTAECRFRDASRVAVEDSLSLPPSSLPITDVKSHPPPKSQSSK
                     SSKSRSKKIIPDSNNEVISLLRDPNLQPPPMPINDLSSSFDTIPSIPGVLLDDFISTL
                     EIGEIGDESFDMVPHVYDMGFTSGLEDFSLSCEFTDIG"
     misc_feature    234..440
                     /gene="LOC139839403"
                     /note="domain in helicases and associated with SANT
                     domains; Region: HSA; smart00573"
                     /db_xref="CDD:214727"
     misc_feature    <327..587
                     /gene="LOC139839403"
                     /note="DNA-binding domain; Region: DBINO; pfam13892"
                     /db_xref="CDD:464024"
     misc_feature    <921..1604
                     /gene="LOC139839403"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     Region: MSCRAMM_ClfA; NF033609"
                     /db_xref="CDD:468110"
     misc_feature    <1692..3728
                     /gene="LOC139839403"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     Region: HepA; COG0553"
                     /db_xref="CDD:440319"
     misc_feature    1713..2381
                     /gene="LOC139839403"
                     /note="DEXH/Q-box helicase domain of SRCAP; Region:
                     DEXQc_SRCAP; cd18003"
                     /db_xref="CDD:350761"
     misc_feature    order(1794..1814,1914..1916,2097..2102)
                     /gene="LOC139839403"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350761"
     misc_feature    <3243..4559
                     /gene="LOC139839403"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
ORIGIN      
        1 attaaattta aaaaatttag aaatttaccg gatctgaaac tactaaaccc gttttctctt
       61 ttcatcgccg aaaccctaaa aatctaccgg aaaacccaac tgattgatta ctcgtttcac
      121 agctgatttg tttaagtaat gtcctgaact ttgagggagt gatggcctct aaaggtccaa
      181 ggtccaaact tgatcatgaa gcgaaggcta agcgccaaaa ggcgcttgaa ccgcctaaag
      241 aaccaaggcg gccaagaaca cattgggacc atcttcttga agagatggtg tggttatcaa
      301 aggattttga gtccgagaga aagttcaaat tggccttggc aaagaaagtt gccataaggg
      361 ctagcaaagg catggtagat caggccacaa gaggagaaag aaaagtaaag gaagaagagc
      421 tccggatgaa aaaggtcgca ctcaatattt ctaaggacgt taagaaattt tggacgaaaa
      481 ttgagaagct ggtgcaatac aagcatcggt tagagcttga tcagaagaag aaaaaggcgc
      541 ttgataaaca acttgagttt cttctagggc aaacagagag gtattcaaca atgctggcag
      601 aaaaccttgt cgactcgtct tcacagccac acgtgcactc gtcgtcggtg caggaacgac
      661 cagccattga atatatagat caaacggatg tcaatgggcg ttgcgaatca aataatgatg
      721 agtccgagtt gaatatttta gaaactgacg aagactatat atctgaaaac gaacccgaag
      781 acgatgagca tacgattgag gaagatgaag ctctgataac cgcagatgaa agacgagagg
      841 aacttgcagc tttgcaaaat gaagtagatt tacccctcga tgagttactt gctcgttatg
      901 ctgttggaga agctactacc gatagtcctc ctgaaaagac taaagattta ggtgaagtga
      961 tgcagataca cgaggatgac cttcagtgta acggaaatga taagtccgat catacatcaa
     1021 agatagaaag ttgtcaaaat gataactccg atcatatatc aaagatagaa agtcgtcatt
     1081 gtgttgaaag taatggcggt ttatcggttt caagacattg tcatttagaa atcaaggagc
     1141 attacgttag aaaacgcaaa cgtaatcaag agggaaacaa aaaatattta caattagact
     1201 tccatgatga gaaagaggat ggtgacttta tagttgcgaa tggagatgat aaggatgatg
     1261 aaacaacctt gttggaggaa gaggaacttg caaaggccga acatgatgat tcaatcgatg
     1321 agattgcatt attgcagaaa gagagtgaaa tctctattga ggatctgctt gcaaggtata
     1381 gacaggatga cgtcaataat agaagttcag acgccgattc agagtcagaa ggtgcatctg
     1441 cctctgaaaa tatgtctaat tcttctggcc aacgagatac tgaagccgat tcatctatga
     1501 atattcaaca aattcctacc gatgaagctg atttaccagt cgaaatcgat cctgaaaagg
     1561 aaattgatat ggatgaagcg gccgacgaag gtggggataa tgaagataga attgctgacg
     1621 cagcagctgc cgccaggtca gcacagccga caggaaatac ctttttgaca actaatgttc
     1681 ggacaaaata cccgtttctg ttaaagttct ctcttcgtga atatcaacac attgggttag
     1741 actggctagt tacgatgtac gaaaaaagac ttaatgggat tcttgcagat gaaatggggc
     1801 tcgggaaaac aatcatgacg attgcgttac ttgcacattt agcatgtgaa aagggcatat
     1861 ggggcccaca tctcattgtg gtacccacga gtgtcatgct caattgggaa accgagtttc
     1921 tgaaatggtg tccagctttt aaaatcttga cgtatttcgg aagcgcaaaa gaacggaaac
     1981 acaagagaca aggatggatg aaaccgcatt cgtttcatgt atgtattaca acttatcggc
     2041 ttgttattca agattcgaaa atttttaaga gaaaaaagtg gaaatatttg attttggatg
     2101 aagcgcatct tataaaaaac tggaaatcac aaaggtggca aacgttgttg aatttcaaca
     2161 caaaaagacg aattctttta accggtaccc ctcttcagaa cgatcttatg gaattatggt
     2221 cgttaatgca tttcttgatg ccacacgttt ttcagtcgca tcaagaattc aaagactggt
     2281 ttagtaatcc gatatcggga atggttgatg gtcaagaaaa agtcaacaaa gaagtaattg
     2341 atcggttgca taacgtcctt cgtccttttt tactcagaag actaaaacgg gacgtggaga
     2401 aacaattacc gagcaaacac gagcatgtta tctactgtag actctcgagg agacaacgga
     2461 acctgtacga ggatttcatt gccagctcag aaacacaagc tactcttcaa agttctaatt
     2521 tttttgggat gatcagtgtt ataatgcaac ttagaaaagt ttgcaaccat cccgatttat
     2581 ttgagggccg tccgattatt agttcttttg atatgaacgg tattgaaacg cagttttgtt
     2641 cgtctgtttg ctcggttctt gcgcctagtc aattttcgac ggttgacctt tgtgggttag
     2701 ggtttgtatt tactcacctt gacttcgaca tgacatcttg ggagagtgat gaagtacaag
     2761 ctatcgaaac accctcaaga ttaatcgaag ctcgtgtaga agaagatttt aagtttgtga
     2821 aaaagtcaaa cggattcaat atctttgaag aaattcaaag ggcacttcac gaggagagac
     2881 ttaacgaaat gaaggagcga gctgcgtcaa ttgcatggtg gaattcgttg aagtgtaaac
     2941 gaaaacccgt gtattcaacg ggattacggg atattttatc tattgaaaat cgctgtcaaa
     3001 atcctgtttc atcgaagctt gcggagatag ttttgactcc ggttgaccgg tttaagcaga
     3061 tggaggacca agttgagagt ttcatgttcg caattccagc agcacgggcc ccaccacctg
     3121 tcgggtggtg cagcaagtcg ggttcgtctg tttttctaaa ccaaactttt aaggataaat
     3181 gttcaacgct gatatcaccg ttattaacgc cgattcgtcc cgctattgtt agaagacaag
     3241 tttattttcc cgataggcgg ttaatacaat tcgattgtgg taagcttcaa gagcttgcgg
     3301 ttcttcttag gcgattaaaa tccgaaggtc atcgtgcact aatcttcact caaatgacaa
     3361 aaatgcttga tgttttggaa gcttttataa atttatatgg gtacacgtac atgcggttag
     3421 acgggtcaac acaacccgaa gagagacaaa ccctaatgca acggttcaat acgaacccga
     3481 agtttttcct ttttatattg tcaacgcgta gtggtggtgt gggtatcaat cttgtaggtg
     3541 cagatacggt tattttttat gatagtgatt ggaacccggc tatggatcaa caagcgcaag
     3601 atcggtgtca ccgaattggt caaacgcgtg aagtacatat ttaccgtttg attagtgaac
     3661 acacgattga agagaatatt ttaaaaaagg cgaaacagaa acgggctctt gatgatttgg
     3721 taattcagag tggtgagtat aacaccgagt ttttcaagaa actcgacccg atggagttgt
     3781 ttacgggtca tggaaccgtt tctgtgaata atatgcagaa aggcaaggct ttggctaacg
     3841 ggtcagaagc cgacctgcct gtttcgaatg cagatgttga ggctgctttg aaacacgcag
     3901 aagatgaagc ggattacatg gcgttaaaga gagtcgaaca ggaagaagcc gttgaaaatc
     3961 aagaatttac tgaagaaccg cctattggac gaatggaaga tgatgagatt ttgaatgagg
     4021 aagatggtga tcatggtgga ttagttacgg ataacccgca aacaccgaaa cggagcgacc
     4081 cgaatgaaga aacgggtatg gatttggtta aggttgagga ggatgatgat gtggacatga
     4141 tagatgatgt taaacagatg gctgcagctg tagcttcggg acaggagatt ttatcattcg
     4201 agaatcaact tcggccaatt gatcgatatg cagtacggtt tctcgagctg tgggacccga
     4261 ttgttgacaa tactgtagaa atagagtcgc aggatcagtt tgagggagcc gattgggagt
     4321 tggatcatat cgagaagtta aaggatgata tggaagcaga agttgatgat gacgaggaac
     4381 ctttagttta tgaaagctgg gattcagagt ttgcaactaa ggtgtaccaa gagcaagtta
     4441 aagctttggc tgaacaacag ttgatagaag aacgtgaaat ggaacttgct agagagaagg
     4501 aacttgctag agagatggaa cttgctagag agagagaact cgcggactta aagaggattg
     4561 agacggctgc aaagaaatcg aagacaaaga aaaaagccaa gaaaccgaag ttcaaatctt
     4621 tgaaacacga agctttatct tgtgacacaa ggactacaaa cataccgtca ccaatagaat
     4681 ttgacgatga tcttgatgac gagttaattt ttgtgaagaa acgcaaaaga gtaataatag
     4741 aggacaacac tgaatttaaa agttccaaga aatctaaaaa gagcaagaag aagaaatctg
     4801 aaccgatccc attagatttg gattctaatt ctttaacaga ccatcaagat gaatcaaaac
     4861 atttgaaatt aagtaataat cttgaggttg atcataagcc aattatcaac agaagcaaaa
     4921 cgggattaaa aatatcggta acatcaatgc cattgaaacg ggtaatgacg attaggctcg
     4981 agaagataag aaagggaagt atatggccta atgattgttt tcctgcaccc gattcttggt
     5041 tatcgtcaga ggatgcggtt ctttgtgcga ttgtacatga atatggtgta aattggagtt
     5101 tggcaagtga tgttttgtac ggtatgacag ctggcgggtt atatagggga attgttcgtc
     5161 atcctgttca ttgttgtgaa aggtatcggg agctggttca aagatacgta ttgtctactt
     5221 ctgaaaatct tcacaatgat aagtcaggtg gcaaagctct tgttagagta agcgaggagc
     5281 atgcaaaaac gttgttggat atcgtttcag aacagccgga tcaagcgtac actcttcaaa
     5341 agcattttgc tcacctgctt acatctttat ggaggtcaac taattgttcc agtcgcctaa
     5401 aaacactcaa aagcgaaaga tttcgggacc cacaattaca agatatgaag ttcactaacg
     5461 taaacgcgat gagcagatta gtagctgatg cactagaaac ttctcaaaat ataccacggg
     5521 aagaaacact ttctagtttt agtgaaagat atcataattc tcgaggtgtt gttagtgagc
     5581 tggcagttac gttacagttt ccttcaagaa cgaatgatga cgatccgaat gttccgttgc
     5641 cttcggtcgt acctgtgtcg gtaaacgata cggaatcgtc gtcgtctgaa aatgtgccta
     5701 tgggtgggaa tcatcttttt aggacgtgta aggatactgc tgaatgtcgt ttcagggatg
     5761 catctagggt tgccgttgag gatagtttaa gcttgccacc atcatcgctt ccaataaccg
     5821 acgtcaaatc tcatccgcca cctaaatccc aatcatcaaa gtcttctaaa tcgagatcga
     5881 agaaaattat cccggactcc aacaacgaag taatttctct acttcgcgac cccaatttgc
     5941 aaccaccacc aatgccgatc aacgatttgt cgtctagttt tgatacgata ccttcgattc
     6001 ctggtgtctt gttggacgat tttataagta cgttggaaat aggagaaata ggagacgaga
     6061 gttttgacat ggtacctcat gtttatgata tgggcttcac atcgggcctt gaagattttt
     6121 cgttatcttg tgagtttact gacattggat agggttaaag tttggtgata acgagtttgg
     6181 tttagagtta actgggccac tgcattttga tcgtacccga tagttcgttg aatgcatcat
     6241 ggattgagag aaagaaagtt actaacttga tgtatctgga agccgagatt tggggtctgt
     6301 ttgcttattt atgggaatct tggaagatac aacattttgc acataaaaaa tgtaacattg
     6361 tatagcatgt ggcccgtcaa gtttgtaact tttttcggtt gttgggtggg aaatcgtgct
     6421 tgttagttat ttcaggtatt ggttaattaa aaatgaattg ttttacgcac atgattcccc
     6481 ctcatagtgt aggaattaga aacaggaaat tagtcgtcga tgaatgaatg aaaaagcaat
     6541 taacctattt ctttctcttt agtgcaatgt tgttaagtgt tgcaggtgct cgcaggagtt
     6601 cactttttat actggtatgt tcttttgaag gacaagcttg tttatttgat ttctttataa
     6661 atcttttaaa tgtggaagtt catgaaagaa ttcggatcaa atgtacaccg ttttgcaaat
     6721 tcaagtttgt gcctttaggt ct
//
LOCUS       XM_071829464            6703 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein
            PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (LOC139839403),
            transcript variant X2, mRNA.
ACCESSION   XM_071829464
VERSION     XM_071829464.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6703
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6703
                     /gene="LOC139839403"
                     /note="protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139839403"
     CDS             123..6113
                     /gene="LOC139839403"
                     /codon_start=1
                     /product="protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING
                     1"
                     /protein_id="XP_071685565.1"
                     /db_xref="GeneID:139839403"
                     /translation="MASKGPRSKLDHEAKAKRQKALEPPKEPRRPRTHWDHLLEEMVW
                     LSKDFESERKFKLALAKKVAIRASKGMVDQATRGERKVKEEELRMKKVALNISKDVKK
                     FWTKIEKLVQYKHRLELDQKKKKALDKQLEFLLGQTERYSTMLAENLVDSSSQPHVHS
                     SSVQERPAIEYIDQTDVNGRCESNNDESELNILETDEDYISENEPEDDEHTIEEDEAL
                     ITADERREELAALQNEVDLPLDELLARYAVGEATTDSPPEKTKDLGEVMQIHEDDLQC
                     NGNDKSDHTSKIESCQNDNSDHISKIESRHCVESNGGLSVSRHCHLEIKEHYVRKRKR
                     NQEGNKKYLQLDFHDEKEDGDFIVANGDDKDDETTLLEEEELAKAEHDDSIDEIALLQ
                     KESEISIEDLLARYRQDDVNNRSSDADSESEGASASENMSNSSGQRDTEADSSMNIQQ
                     IPTDEADLPVEIDPEKEIDMDEAADEGGDNEDRIADAAAAARSAQPTGNTFLTTNVRT
                     KYPFLLKFSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGI
                     WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWMKPHSFHVCITT
                     YRLVIQDSKIFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNTKRRILLTGTPLQNDL
                     MELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVDGQEKVNKEVIDRLHNVLRPFLLRR
                     LKRDVEKQLPSKHEHVIYCRLSRRQRNLYEDFIASSETQATLQSSNFFGMISVIMQLR
                     KVCNHPDLFEGRPIISSFDMNGIETQFCSSVCSVLAPSQFSTVDLCGLGFVFTHLDFD
                     MTSWESDEVQAIETPSRLIEARVEEDFKFVKKSNGFNIFEEIQRALHEERLNEMKERA
                     ASIAWWNSLKCKRKPVYSTGLRDILSIENRCQNPVSSKLAEIVLTPVDRFKQMEDQVE
                     SFMFAIPAARAPPPVGWCSKSGSSVFLNQTFKDKCSTLISPLLTPIRPAIVRRQVYFP
                     DRRLIQFDCGKLQELAVLLRRLKSEGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDG
                     STQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ
                     DRCHRIGQTREVHIYRLISEHTIEENILKKAKQKRALDDLVIQSGEYNTEFFKKLDPM
                     ELFTGHGTVSVNNMQKGKALANGSEADLPVSNADVEAALKHAEDEADYMALKRVEQEE
                     AVENQEFTEEPPIGRMEDDEILNEEDGDHGGLVTDNPQTPKRSDPNEETGMDLVKVEE
                     DDDVDMIDDVKQMAAAVASGQEILSFENQLRPIDRYAVRFLELWDPIVDNTVEIESQD
                     QFEGADWELDHIEKLKDDMEAEVDDDEEPLVYESWDSEFATKVYQEQVKALAEQQLIE
                     EREMELAREKELAREMELARERELADLKRIETAAKKSKTKKKAKKPKFKSLKHEALSC
                     DTRTTNIPSPIEFDDDLDDELIFVKKRKRVIIEDNTEFKSSKKSKKSKKKKSEPIPLD
                     LDSNSLTDHQDESKHLKLSNNLEVDHKPIINRSKTGLKISVTSMPLKRVMTIRLEKIR
                     KGSIWPNDCFPAPDSWLSSEDAVLCAIVHEYGVNWSLASDVLYGMTAGGLYRGIVRHP
                     VHCCERYRELVQRYVLSTSENLHNDKSGGKALVRVSEEHAKTLLDIVSEQPDQAYTLQ
                     KHFAHLLTSLWRSTNCSSRLKTLKSERFRDPQLQDMKFTNVNAMSRLVADALETSQNI
                     PREETLSSFSERYHNSRGVVSELAVTLQFPSRTNDDDPNVPLPSVVPVSVNDTESSSS
                     ENVPMGGNHLFRTCKDTAECRFRDASRVAVEDSLSLPPSSLPITDVKSHPPPKSQSSK
                     SSKSRSKKIIPDSNNEVISLLRDPNLQPPPMPINDLSSSFDTIPSIPGVLLDDFISTL
                     EIGEIGDESFDMVPHVYDMGFTSGLEDFSLSCEFTDIG"
     misc_feature    195..401
                     /gene="LOC139839403"
                     /note="domain in helicases and associated with SANT
                     domains; Region: HSA; smart00573"
                     /db_xref="CDD:214727"
     misc_feature    <288..548
                     /gene="LOC139839403"
                     /note="DNA-binding domain; Region: DBINO; pfam13892"
                     /db_xref="CDD:464024"
     misc_feature    <882..1565
                     /gene="LOC139839403"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     Region: MSCRAMM_ClfA; NF033609"
                     /db_xref="CDD:468110"
     misc_feature    <1653..3689
                     /gene="LOC139839403"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     Region: HepA; COG0553"
                     /db_xref="CDD:440319"
     misc_feature    1674..2342
                     /gene="LOC139839403"
                     /note="DEXH/Q-box helicase domain of SRCAP; Region:
                     DEXQc_SRCAP; cd18003"
                     /db_xref="CDD:350761"
     misc_feature    order(1755..1775,1875..1877,2058..2063)
                     /gene="LOC139839403"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350761"
     misc_feature    <3204..4520
                     /gene="LOC139839403"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
ORIGIN      
        1 tctcttttca tcgccgaaac cctaaaaatc taccggaaaa cccaactgat tgattactcg
       61 tttcacagct gttttttatt ttgcagattt gtttaagtaa tgtcctgaac tttgagggag
      121 tgatggcctc taaaggtcca aggtccaaac ttgatcatga agcgaaggct aagcgccaaa
      181 aggcgcttga accgcctaaa gaaccaaggc ggccaagaac acattgggac catcttcttg
      241 aagagatggt gtggttatca aaggattttg agtccgagag aaagttcaaa ttggccttgg
      301 caaagaaagt tgccataagg gctagcaaag gcatggtaga tcaggccaca agaggagaaa
      361 gaaaagtaaa ggaagaagag ctccggatga aaaaggtcgc actcaatatt tctaaggacg
      421 ttaagaaatt ttggacgaaa attgagaagc tggtgcaata caagcatcgg ttagagcttg
      481 atcagaagaa gaaaaaggcg cttgataaac aacttgagtt tcttctaggg caaacagaga
      541 ggtattcaac aatgctggca gaaaaccttg tcgactcgtc ttcacagcca cacgtgcact
      601 cgtcgtcggt gcaggaacga ccagccattg aatatataga tcaaacggat gtcaatgggc
      661 gttgcgaatc aaataatgat gagtccgagt tgaatatttt agaaactgac gaagactata
      721 tatctgaaaa cgaacccgaa gacgatgagc atacgattga ggaagatgaa gctctgataa
      781 ccgcagatga aagacgagag gaacttgcag ctttgcaaaa tgaagtagat ttacccctcg
      841 atgagttact tgctcgttat gctgttggag aagctactac cgatagtcct cctgaaaaga
      901 ctaaagattt aggtgaagtg atgcagatac acgaggatga ccttcagtgt aacggaaatg
      961 ataagtccga tcatacatca aagatagaaa gttgtcaaaa tgataactcc gatcatatat
     1021 caaagataga aagtcgtcat tgtgttgaaa gtaatggcgg tttatcggtt tcaagacatt
     1081 gtcatttaga aatcaaggag cattacgtta gaaaacgcaa acgtaatcaa gagggaaaca
     1141 aaaaatattt acaattagac ttccatgatg agaaagagga tggtgacttt atagttgcga
     1201 atggagatga taaggatgat gaaacaacct tgttggagga agaggaactt gcaaaggccg
     1261 aacatgatga ttcaatcgat gagattgcat tattgcagaa agagagtgaa atctctattg
     1321 aggatctgct tgcaaggtat agacaggatg acgtcaataa tagaagttca gacgccgatt
     1381 cagagtcaga aggtgcatct gcctctgaaa atatgtctaa ttcttctggc caacgagata
     1441 ctgaagccga ttcatctatg aatattcaac aaattcctac cgatgaagct gatttaccag
     1501 tcgaaatcga tcctgaaaag gaaattgata tggatgaagc ggccgacgaa ggtggggata
     1561 atgaagatag aattgctgac gcagcagctg ccgccaggtc agcacagccg acaggaaata
     1621 cctttttgac aactaatgtt cggacaaaat acccgtttct gttaaagttc tctcttcgtg
     1681 aatatcaaca cattgggtta gactggctag ttacgatgta cgaaaaaaga cttaatggga
     1741 ttcttgcaga tgaaatgggg ctcgggaaaa caatcatgac gattgcgtta cttgcacatt
     1801 tagcatgtga aaagggcata tggggcccac atctcattgt ggtacccacg agtgtcatgc
     1861 tcaattggga aaccgagttt ctgaaatggt gtccagcttt taaaatcttg acgtatttcg
     1921 gaagcgcaaa agaacggaaa cacaagagac aaggatggat gaaaccgcat tcgtttcatg
     1981 tatgtattac aacttatcgg cttgttattc aagattcgaa aatttttaag agaaaaaagt
     2041 ggaaatattt gattttggat gaagcgcatc ttataaaaaa ctggaaatca caaaggtggc
     2101 aaacgttgtt gaatttcaac acaaaaagac gaattctttt aaccggtacc cctcttcaga
     2161 acgatcttat ggaattatgg tcgttaatgc atttcttgat gccacacgtt tttcagtcgc
     2221 atcaagaatt caaagactgg tttagtaatc cgatatcggg aatggttgat ggtcaagaaa
     2281 aagtcaacaa agaagtaatt gatcggttgc ataacgtcct tcgtcctttt ttactcagaa
     2341 gactaaaacg ggacgtggag aaacaattac cgagcaaaca cgagcatgtt atctactgta
     2401 gactctcgag gagacaacgg aacctgtacg aggatttcat tgccagctca gaaacacaag
     2461 ctactcttca aagttctaat ttttttggga tgatcagtgt tataatgcaa cttagaaaag
     2521 tttgcaacca tcccgattta tttgagggcc gtccgattat tagttctttt gatatgaacg
     2581 gtattgaaac gcagttttgt tcgtctgttt gctcggttct tgcgcctagt caattttcga
     2641 cggttgacct ttgtgggtta gggtttgtat ttactcacct tgacttcgac atgacatctt
     2701 gggagagtga tgaagtacaa gctatcgaaa caccctcaag attaatcgaa gctcgtgtag
     2761 aagaagattt taagtttgtg aaaaagtcaa acggattcaa tatctttgaa gaaattcaaa
     2821 gggcacttca cgaggagaga cttaacgaaa tgaaggagcg agctgcgtca attgcatggt
     2881 ggaattcgtt gaagtgtaaa cgaaaacccg tgtattcaac gggattacgg gatattttat
     2941 ctattgaaaa tcgctgtcaa aatcctgttt catcgaagct tgcggagata gttttgactc
     3001 cggttgaccg gtttaagcag atggaggacc aagttgagag tttcatgttc gcaattccag
     3061 cagcacgggc cccaccacct gtcgggtggt gcagcaagtc gggttcgtct gtttttctaa
     3121 accaaacttt taaggataaa tgttcaacgc tgatatcacc gttattaacg ccgattcgtc
     3181 ccgctattgt tagaagacaa gtttattttc ccgataggcg gttaatacaa ttcgattgtg
     3241 gtaagcttca agagcttgcg gttcttctta ggcgattaaa atccgaaggt catcgtgcac
     3301 taatcttcac tcaaatgaca aaaatgcttg atgttttgga agcttttata aatttatatg
     3361 ggtacacgta catgcggtta gacgggtcaa cacaacccga agagagacaa accctaatgc
     3421 aacggttcaa tacgaacccg aagtttttcc tttttatatt gtcaacgcgt agtggtggtg
     3481 tgggtatcaa tcttgtaggt gcagatacgg ttatttttta tgatagtgat tggaacccgg
     3541 ctatggatca acaagcgcaa gatcggtgtc accgaattgg tcaaacgcgt gaagtacata
     3601 tttaccgttt gattagtgaa cacacgattg aagagaatat tttaaaaaag gcgaaacaga
     3661 aacgggctct tgatgatttg gtaattcaga gtggtgagta taacaccgag tttttcaaga
     3721 aactcgaccc gatggagttg tttacgggtc atggaaccgt ttctgtgaat aatatgcaga
     3781 aaggcaaggc tttggctaac gggtcagaag ccgacctgcc tgtttcgaat gcagatgttg
     3841 aggctgcttt gaaacacgca gaagatgaag cggattacat ggcgttaaag agagtcgaac
     3901 aggaagaagc cgttgaaaat caagaattta ctgaagaacc gcctattgga cgaatggaag
     3961 atgatgagat tttgaatgag gaagatggtg atcatggtgg attagttacg gataacccgc
     4021 aaacaccgaa acggagcgac ccgaatgaag aaacgggtat ggatttggtt aaggttgagg
     4081 aggatgatga tgtggacatg atagatgatg ttaaacagat ggctgcagct gtagcttcgg
     4141 gacaggagat tttatcattc gagaatcaac ttcggccaat tgatcgatat gcagtacggt
     4201 ttctcgagct gtgggacccg attgttgaca atactgtaga aatagagtcg caggatcagt
     4261 ttgagggagc cgattgggag ttggatcata tcgagaagtt aaaggatgat atggaagcag
     4321 aagttgatga tgacgaggaa cctttagttt atgaaagctg ggattcagag tttgcaacta
     4381 aggtgtacca agagcaagtt aaagctttgg ctgaacaaca gttgatagaa gaacgtgaaa
     4441 tggaacttgc tagagagaag gaacttgcta gagagatgga acttgctaga gagagagaac
     4501 tcgcggactt aaagaggatt gagacggctg caaagaaatc gaagacaaag aaaaaagcca
     4561 agaaaccgaa gttcaaatct ttgaaacacg aagctttatc ttgtgacaca aggactacaa
     4621 acataccgtc accaatagaa tttgacgatg atcttgatga cgagttaatt tttgtgaaga
     4681 aacgcaaaag agtaataata gaggacaaca ctgaatttaa aagttccaag aaatctaaaa
     4741 agagcaagaa gaagaaatct gaaccgatcc cattagattt ggattctaat tctttaacag
     4801 accatcaaga tgaatcaaaa catttgaaat taagtaataa tcttgaggtt gatcataagc
     4861 caattatcaa cagaagcaaa acgggattaa aaatatcggt aacatcaatg ccattgaaac
     4921 gggtaatgac gattaggctc gagaagataa gaaagggaag tatatggcct aatgattgtt
     4981 ttcctgcacc cgattcttgg ttatcgtcag aggatgcggt tctttgtgcg attgtacatg
     5041 aatatggtgt aaattggagt ttggcaagtg atgttttgta cggtatgaca gctggcgggt
     5101 tatatagggg aattgttcgt catcctgttc attgttgtga aaggtatcgg gagctggttc
     5161 aaagatacgt attgtctact tctgaaaatc ttcacaatga taagtcaggt ggcaaagctc
     5221 ttgttagagt aagcgaggag catgcaaaaa cgttgttgga tatcgtttca gaacagccgg
     5281 atcaagcgta cactcttcaa aagcattttg ctcacctgct tacatcttta tggaggtcaa
     5341 ctaattgttc cagtcgccta aaaacactca aaagcgaaag atttcgggac ccacaattac
     5401 aagatatgaa gttcactaac gtaaacgcga tgagcagatt agtagctgat gcactagaaa
     5461 cttctcaaaa tataccacgg gaagaaacac tttctagttt tagtgaaaga tatcataatt
     5521 ctcgaggtgt tgttagtgag ctggcagtta cgttacagtt tccttcaaga acgaatgatg
     5581 acgatccgaa tgttccgttg ccttcggtcg tacctgtgtc ggtaaacgat acggaatcgt
     5641 cgtcgtctga aaatgtgcct atgggtggga atcatctttt taggacgtgt aaggatactg
     5701 ctgaatgtcg tttcagggat gcatctaggg ttgccgttga ggatagttta agcttgccac
     5761 catcatcgct tccaataacc gacgtcaaat ctcatccgcc acctaaatcc caatcatcaa
     5821 agtcttctaa atcgagatcg aagaaaatta tcccggactc caacaacgaa gtaatttctc
     5881 tacttcgcga ccccaatttg caaccaccac caatgccgat caacgatttg tcgtctagtt
     5941 ttgatacgat accttcgatt cctggtgtct tgttggacga ttttataagt acgttggaaa
     6001 taggagaaat aggagacgag agttttgaca tggtacctca tgtttatgat atgggcttca
     6061 catcgggcct tgaagatttt tcgttatctt gtgagtttac tgacattgga tagggttaaa
     6121 gtttggtgat aacgagtttg gtttagagtt aactgggcca ctgcattttg atcgtacccg
     6181 atagttcgtt gaatgcatca tggattgaga gaaagaaagt tactaacttg atgtatctgg
     6241 aagccgagat ttggggtctg tttgcttatt tatgggaatc ttggaagata caacattttg
     6301 cacataaaaa atgtaacatt gtatagcatg tggcccgtca agtttgtaac ttttttcggt
     6361 tgttgggtgg gaaatcgtgc ttgttagtta tttcaggtat tggttaatta aaaatgaatt
     6421 gttttacgca catgattccc cctcatagtg taggaattag aaacaggaaa ttagtcgtcg
     6481 atgaatgaat gaaaaagcaa ttaacctatt tctttctctt tagtgcaatg ttgttaagtg
     6541 ttgcaggtgc tcgcaggagt tcacttttta tactggtatg ttcttttgaa ggacaagctt
     6601 gtttatttga tttctttata aatcttttaa atgtggaagt tcatgaaaga attcggatca
     6661 aatgtacacc gttttgcaaa ttcaagtttg tgcctttagg tct
//
LOCUS       XM_071829465            3084 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PAF1 homolog
            (LOC139839404), transcript variant X1, mRNA.
ACCESSION   XM_071829465
VERSION     XM_071829465.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3084
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3084
                     /gene="LOC139839404"
                     /note="protein PAF1 homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839404"
     CDS             598..2670
                     /gene="LOC139839404"
                     /codon_start=1
                     /product="protein PAF1 homolog"
                     /protein_id="XP_071685566.1"
                     /db_xref="GeneID:139839404"
                     /translation="MTSYRPFPPPPPPSQANFGPPPPPRANYTTLPPPSLAPPPQTNQ
                     YSQNWGYLNSNFQQGGYAAPPSNPVPNQQQFGSHPPPPPPPESAYPPPPPPSQAAPPG
                     QMYLPSSRYAQLQQPPPPPPSSPPSSSVPPPPPPPSQPPSPPPPPSSSVSISNQPKEN
                     RHDGYKRSSKDMESSKGRDRLLSHHAGPSRHHSKSSNLPPMPARKSNGPPGRVEAEEE
                     RRLRKKREMEKQRRDEKIRQQLKESQNKILQKTQVISSGIKPHGSVSGSHMDDRRATP
                     FLTGERIENRLKKPTTFICKLKFRDELPDSTSQPKLMSIRRDKDRAVKYAVTSLEKVH
                     KPQLHVELDLGIPLDLLDLSVYNAPKDEMLHVAPEDEKLLQEDVTVTPIKNDGLKRKE
                     RPTDKGMSWLVKTQYISPLSTDATRQSLTEKQAKELREKRGNALLDNLNSREKKIKDI
                     KASFDACKTLPVHATNKNLHPVEILPLFPDFERWEDQFVVATFDGPPTVDSESYNKMD
                     KSVRDAHESQAVMKSYVASTSDSAKPDKFLAYMVPSVGELSKDIYDDGEDVSYTWVRE
                     YHWDVRGEDADDPTNFLVSFGESEARYMPLPTKLMLRKKRAREGKTGDEVEHFPVPAS
                     ITVRQRPNVSVEMKESEIYVGSKGRSSNARHDSRMDMEDDVIQHHNGMDVDDDMDQYS
                     GAEYDVSD"
     misc_feature    <1231..>1359
                     /gene="LOC139839404"
                     /note="Coiled-coil domain-containing protein 66; Region:
                     CCDC66; pfam15236"
                     /db_xref="CDD:434558"
     misc_feature    1477..2520
                     /gene="LOC139839404"
                     /note="Region: Paf1; pfam03985"
                     /db_xref="CDD:397885"
ORIGIN      
        1 catccttttc ccccgtattc aatagctaac taggtcacca tacatctccg atcacttttt
       61 ccggctactt tctccatcta acatcaaaca cttgatatat ctatatatat atctacagcg
      121 atatttgtta ctgcacattc ttcaatttag ttcacgtatt tgtctttaca tctccgcatt
      181 gagctctcga atcgacacat tattgcgcaa acgatcgatt taaaagtagc gttattatca
      241 tcatctatgt gagttcgttt cattaatttt taaatcagac tgaatttcgt ctcagttttc
      301 cgtttcctag ggtttttgat tcagtaattc tgtatttaag cataagtttt tacctagttt
      361 tattgttcta gggttttgaa attctttttg ttaaatttga aaattttgaa tggtacttga
      421 gtacgaatta ccataaagat tgaaattcgt tacttctatt aagcatttat ttcgataact
      481 ttcggtttat gattccgatc gtatacaatc tgtagatgta gtatttatat ctataggttt
      541 tcaagggttt tagtgaaaca gtgaggtgtg gttctgtaga gtgaaattct gtagggcatg
      601 acatcataca ggccattccc tccaccacca ccaccttctc aagcaaattt tggacctccg
      661 ccacctccgc gggctaatta cactacactt ccacctccat cgcttgctcc acctccacaa
      721 accaatcagt attctcaaaa ttggggatat ctaaattcga actttcaaca gggtggttat
      781 gcagctccac caagtaatcc tgttcccaat caacaacaat ttgggtctca tccaccacca
      841 cctccgccac cagaatctgc atatccgcca ccaccacctc cttcccaggc tgcaccacca
      901 ggacaaatgt atttaccgtc ttctcggtat gctcagttac aacagccacc accacctccg
      961 ccttcctctc ccccgagttc gtctgtccca cccccacctc ctcctccatc acaaccgcca
     1021 tcaccgcctc ctcctccttc ttcatctgtt tcaattagta atcaacctaa ggaaaacaga
     1081 catgatgggt ataagaggtc ttctaaagac atggagagtt ctaaagggcg agatcgattg
     1141 ctttcccatc acgcgggtcc ttctagacat cattccaagt cttctaattt acctcctatg
     1201 cctgctagaa aatcaaatgg ccctcctggc agggttgaag ctgaagaaga aagaaggttg
     1261 cgtaagaaga gagaaatgga gaagcaaagg cgagacgaaa aaatcaggca gcaattgaaa
     1321 gaatctcaga ataaaatcct ccaaaaaacc caagtgatat cttcagggat caagccacat
     1381 ggttcagtta gtggctccca tatggatgac aggagggcta caccattctt gactggtgaa
     1441 agaatagaaa accgattaaa gaagccaaca acatttattt gcaagttgaa attccgggat
     1501 gaattaccag attcaacatc tcaaccgaaa cttatgtcta taaggagaga taaagatcga
     1561 gctgttaaat atgccgtcac atcactggaa aaggtgcata agcctcaatt gcatgttgag
     1621 ctagaccttg ggataccgct tgacctacta gatctcagtg tatacaatgc tcccaaggat
     1681 gaaatgctac atgttgctcc tgaagacgag aaattattgc aagaggatgt tacagtaaca
     1741 ccaattaaaa atgatgggtt aaagagaaag gaacgtccca cggataaagg gatgtcttgg
     1801 ctggtgaaga ctcaatacat atctcctctt agcacggatg caacaagaca gtctttgact
     1861 gaaaaacaag caaaagaact tcgggaaaaa cgcggaaacg cccttctgga caacctcaat
     1921 agtagggaaa agaaaattaa ggacatcaag gcttcattcg atgcttgcaa gacgcttcct
     1981 gttcatgcaa ccaacaaaaa ccttcaccct gttgagattt tgccattatt tcctgatttt
     2041 gaacggtggg aagatcaatt tgttgttgca acctttgacg gtcctcctac tgtggattcg
     2101 gaaagctaca acaaaatgga caaatctgtt agggatgcgc atgaatctca ggctgtcatg
     2161 aaaagttatg tggcaagtac ctcggattca gctaaacctg acaagttttt ggcttacatg
     2221 gttccttcgg ttggtgagtt atcaaaggat atttatgatg atggtgaaga tgtctcttac
     2281 acgtgggttc gcgagtatca ctgggatgtt cgaggcgagg atgctgatga tcctacaaat
     2341 ttcctcgtgt catttgggga atcagaggct cgctacatgc ctttgccaac aaaactcatg
     2401 ttaaggaaaa agagagcccg ggaaggaaaa acaggtgatg aggttgaaca tttcccggtt
     2461 cctgcaagta tcacagtgag gcaaagacca aatgtttcag ttgagatgaa ggaatccgag
     2521 atttatgttg gctctaaagg gagaagttca aatgctagac atgatagtag aatggacatg
     2581 gaagatgatg tcattcaaca tcataatggc atggatgttg atgatgatat ggaccaatat
     2641 agtggagctg aatacgatgt ttccgattaa tatcccatga gacttatgga aagataaaca
     2701 gctaaggtag ctgcaaaaag ggaaagataa aaacaggata tacaacatat aatccgagtg
     2761 taggagggat ttccttttta tatccttaca gtgtatgtta tcctttagcc ccttttttag
     2821 tgtttgcact ttcatcattg cgcgcgattt tatctctaaa gtatgtgtac attatgtaat
     2881 gcagttttta acaaatccat ttatagaaga cacatttatt gtcaaatagg agctaaaagt
     2941 tgggagatat cttggtacag atgaattctg tgatgttgaa ttcttgattt tgcgtttcaa
     3001 aaatgcattc ctttattgtt gtattctgca caaatgtctc aaaaatgcag ttttgaatta
     3061 tcacttcatt tttttctgca caaa
//
LOCUS       XR_011756945            2992 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PAF1 homolog
            (LOC139839404), transcript variant X2, misc_RNA.
ACCESSION   XR_011756945
VERSION     XR_011756945.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2992
                     /gene="LOC139839404"
                     /note="protein PAF1 homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839404"
     misc_RNA        1..2992
                     /gene="LOC139839404"
                     /product="protein PAF1 homolog, transcript variant X2"
                     /db_xref="GeneID:139839404"
ORIGIN      
        1 catccttttc ccccgtattc aatagctaac taggtcacca tacatctccg atcacttttt
       61 ccggctactt tctccatcta acatcaaaca cttgatatat ctatatatat atctacagcg
      121 atatttgtta ctgcacattc ttcaatttag ttcacgtatt tgtctttaca tctccgcatt
      181 gagctctcga atcgacacat tattgcgcaa acgatcgatt taaaagtagc gttattatca
      241 tcatctatgt gagttcgttt cattaatttt taaatcagac tgaatttcgt ctcagttttc
      301 cgtttcctag ggtttttgat tcagtaattc tgtatttaag cataagtttt tacctagttt
      361 tattgttcta gggttttgaa attctttttg ttaaatttga aaattttgaa tggtacttga
      421 gtacgaatta ccataaagat tgaaattcgt tacttctatt aagcatttat ttcgataact
      481 ttcggtttat gattccgatc gtatacaatc tgtagatgta gtatttatat ctataggttt
      541 tcaagggttt tagtgaaaca gtgaggtgtg gttctgtaga gtgaaattct gtagggcatg
      601 acatcataca ggccattccc tccaccacca ccaccttctc aagcaaattt tggacctccg
      661 ccacctccgc gggctaatta cactacactt ccacctccat cgcttgctcc acctccacaa
      721 accaatcagt attctcaaaa ttggggatat ctaaattcga actttcaaca gggtggttat
      781 gcagctccac caagtaatcc tgttcccaat caacaacaat ttgggtctca tccaccacca
      841 cctccgccac cagaatctgc atatccgcca ccaccacctc cttcccaggc tgcaccacca
      901 ggacaaatgt atttaccgtc ttctcggtat gctcagttac aacagccacc accacctccg
      961 ccttcctctc ccccgagttc gtctgtccca cccccacctc ctcctccatc acaaccgcca
     1021 tcaccgcctc ctcctccttc ttcatctgtt tcaattagta atcaacctaa ggaaaacaga
     1081 catgatgggt ataagaggtc ttctaaagac atggagagtt ctaaagggcg agatcgattg
     1141 ctttcccatc acgcgggtcc ttctagacat cattccaagt cttctaattt acctcctatg
     1201 cctgctagaa aatcaaatgg ccctcctggc agggttgaag ctgaagaaga aagaaggttg
     1261 cgtaagaaga gagaaatgga gaagcaaagg cgagacgaaa aaatcaggca gcaattgaaa
     1321 gaatctcaga ataaaatcct ccaaaaaacc caagtgatat cttcagggat caagccacat
     1381 ggttcagtta gtggctccca tatggatgac aggagggcta caccattctt gactggtgaa
     1441 agaatagaaa accgattaaa gaagccaaca acatttattt gcaagttgaa attccgggat
     1501 gaattaccag attcaacatc tcaaccgaaa cttatgtcta taaggagaga taaagatcga
     1561 gctgttaaat atgccgtcac atcactggaa aaggtgcata agcctcaatt gcatgttgag
     1621 ctagaccttg ggataccgct tgacctacta gatctcagtg tatacaatgc tcccaaggat
     1681 gaaatgctac atgttgctcc tgaagacgag aaattattgc aagaggatgt tacagtaaca
     1741 ccaattaaaa atgatgggtt aaagagaaag gaacgtccca cggataaagg gatgtcttgg
     1801 ctggtgaaga ctcaatacat atctcctctt agcacggatg caacaagaca gtctttgact
     1861 gaaaaacaag caaaagaact tcgggaaaaa cgcggaaacg cccttctgga caacctcaat
     1921 agtagggaaa agaaaattaa ggacatcaag gcttcattcg atgcttgcaa gacgcttcct
     1981 gttcatgcaa ccaacaaaaa ccttcaccct gttgagattt tgccattatt tcctgatttt
     2041 gaacggtggg aagatcaatt tgttgttgca acctttgacg gtcctcctac tgtggattcg
     2101 gaaagctaca acaaaatgga caaatctgtt agggatgcgc atgaatctca ggctgtcatg
     2161 aaaagttatg tggcaagtac ctcggattca gctaaacctg acaagttttt ggcttacatg
     2221 gttccttcgg ttggtgagtt atcaaaggat atttatgatg atggtgaaga tgtctcttac
     2281 acgtgggttc gcgagtatca ctgggatgtt cgaggcgagg atgctgatga tcctacaaat
     2341 ttcctcgtgt catttgggga atcagaggct cgctacatgc ctttgccaac aaaactcatg
     2401 ttaaggaaaa agagagcccg ggaaggaaaa acaggtgatg aggttgaaca tttcccggtt
     2461 cctgcaagta tcacagtgag gcaaagacca aatgtttcag ttgagatgaa ggaatccgag
     2521 atttatgttg gctctaaagg gagaagttca aatgctagac atgatagtag aatggacatg
     2581 gaagatgatg tcattcaaca tcataatggc atggatgttg atgatgatat ggaccaatat
     2641 agtggagctg aatacgatgt ttccgattaa tatcccatga gacttatgga aagataaaca
     2701 gctaaggtag ctgcaaaaag ggaaagataa aaacaggata tacaacatat aatccgagtg
     2761 taggagggat ttccttttta tatccttaca gttttttaac aaatccattt atagaagaca
     2821 catttattgt caaataggag ctaaaagttg ggagatatct tggtacagat gaattctgtg
     2881 atgttgaatt cttgattttg cgtttcaaaa atgcattcct ttattgttgt attctgcaca
     2941 aatgtctcaa aaatgcagtt ttgaattatc acttcatttt tttctgcaca aa
//
LOCUS       XR_011756946             434 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839406), ncRNA.
ACCESSION   XR_011756946
VERSION     XR_011756946.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..434
                     /gene="LOC139839406"
                     /note="uncharacterized LOC139839406; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839406"
     ncRNA           1..434
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839406"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839406"
ORIGIN      
        1 ttttggaatc catcacatca tacattatct cgttaaatgt attgttgctt tagagcacaa
       61 gtactttgac gtcaactttg ccgaattttg atgcatggaa accaaacttg catatctgtc
      121 tatggctttt gcgcttcggc attggcggca taatgtgacc aaataggaaa caagagtaat
      181 acaaaacacg acaacaacga aagaacacaa gtgcaagttg cggaggaagc aactagctaa
      241 atacaaatat taatcaaaac atgaccaagg attcgagatc catagaagcc aatccatctt
      301 ccggttacgt acacgccccg atatccatac gaagcacatt gcgttgtggg ggtagcgggg
      361 agggggcttt ttaccggtca tgccctcaaa ttggtccggg tttactccag agcagcagtt
      421 ggggacttgg gggc
//
LOCUS       XM_071829466            1310 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839408), transcript variant X1, mRNA.
ACCESSION   XM_071829466
VERSION     XM_071829466.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1310
                     /gene="LOC139839408"
                     /note="uncharacterized LOC139839408; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839408"
     CDS             106..1119
                     /gene="LOC139839408"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685567.1"
                     /db_xref="GeneID:139839408"
                     /translation="MPRYDDRYGTTRYDDRYGTTRYDDRYGTTRYDDRYGTTRLYVGH
                     LSSRTRSRDLEYLFSKYGRVRDVDMKHDFAFVDFRDPRDADDARYSLNGRDLNGSRLI
                     VEFAKGTPRGPGGSREYLGRGPPPSLGRCFNCGLDGHWARDCKAGDWKNKCYRCGERG
                     HIERNCQNSPKKLKRGRSYSRSPVRSRSPRRHRNRSPSYSRSPSHSRSPKKERIVVRE
                     RTRSPRDSRSPSRSPGSPPPTIGRERSPTPTEDRVSPSPSPQRAKSQSPTSSPVEANG
                     HSRSPSPVFEQSPEDPNGAAGEETLVDHDVPAAQGSPVDEDGLVVEGTPVDGDEENLP
                     GSE"
     misc_feature    220..429
                     /gene="LOC139839408"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    <472..639
                     /gene="LOC139839408"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 ctaggtctaa atcgaatttt ggggaaaatt gataaggttc gttcatatcg ctaattactc
       61 accaagtcgc aaaattattt gaagaaattt ttattcaggt tgaaaatgcc tcgctatgat
      121 gatcgatatg gtacaactcg ttatgatgat cgatatggta caactcgtta tgatgatcga
      181 tatggtacaa ctcgttatga tgatcgatat ggtacaactc gtttgtatgt cggccatttg
      241 tcttcacgga cacgctctcg tgatttggag taccttttta gcaaatatgg gagagtacga
      301 gatgtggata tgaagcatga ctttgcattt gttgatttta gagatccccg tgatgctgat
      361 gatgcaagat atagcttgaa tggtagagac ttgaatggca gtcggcttat tgtggaattt
      421 gcaaagggta ctccacgtgg acctggcgga tctagagaat atttaggtag aggaccacct
      481 cctagtttag ggcggtgttt caactgtggg cttgatggtc actgggctcg agactgcaaa
      541 gctggtgact ggaagaacaa atgttaccga tgtggtgaaa ggggccacat tgaaaggaac
      601 tgccaaaata gtcctaaaaa actcaaacgt ggtcgtagct actcaaggtc acctgtgcga
      661 tcacgctctc cccgtcgtca cagaaaccgg agtccaagct acagtagaag tcccagtcat
      721 tcgagatctc caaagaagga acgtatagtg gtgcgtgaaa gaacaaggag ccctcgtgat
      781 tctaggagcc caagccgcag ccctggttca ccacctccca ccataggaag agagcgcagc
      841 ccaactccaa ctgaagacag agtcagccct tcgcctagtc cacaaagagc aaagagccaa
      901 agtcctacaa gcagtccagt tgaagccaat ggtcacagcc gtagtccaag ccctgtgttt
      961 gagcagagcc ccgaagaccc taatggtgct gctggcgagg agaccctggt tgaccatgat
     1021 gtccctgcag ctcagggtag cccagttgac gaagatggtc tagttgttga aggaactcct
     1081 gttgatggtg atgaagagaa tctaccaggt agtgagtgat gtaatactgt gttgaaaata
     1141 agccgtggtt atattacagt aacttactga agaactatgt ctgttttgtg ttttttttgt
     1201 tttttgtttt ttttttttgt tttttgttat ggaggaatgg ttgtaacagt ttgaacttac
     1261 atctttggct ttaatacctt gacctcctaa tatgatatga gctatcaaga
//
LOCUS       XM_071829468            1558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839408), transcript variant X2, mRNA.
ACCESSION   XM_071829468
VERSION     XM_071829468.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1558
                     /gene="LOC139839408"
                     /note="uncharacterized LOC139839408; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839408"
     CDS             354..1367
                     /gene="LOC139839408"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685569.1"
                     /db_xref="GeneID:139839408"
                     /translation="MPRYDDRYGTTRYDDRYGTTRYDDRYGTTRYDDRYGTTRLYVGH
                     LSSRTRSRDLEYLFSKYGRVRDVDMKHDFAFVDFRDPRDADDARYSLNGRDLNGSRLI
                     VEFAKGTPRGPGGSREYLGRGPPPSLGRCFNCGLDGHWARDCKAGDWKNKCYRCGERG
                     HIERNCQNSPKKLKRGRSYSRSPVRSRSPRRHRNRSPSYSRSPSHSRSPKKERIVVRE
                     RTRSPRDSRSPSRSPGSPPPTIGRERSPTPTEDRVSPSPSPQRAKSQSPTSSPVEANG
                     HSRSPSPVFEQSPEDPNGAAGEETLVDHDVPAAQGSPVDEDGLVVEGTPVDGDEENLP
                     GSE"
     misc_feature    468..677
                     /gene="LOC139839408"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    <720..887
                     /gene="LOC139839408"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 ctaggtctaa atcgaatttt ggggaaaatt gataaggttc gttcatatcg ctaattactc
       61 accaagtcgc aaaattattt gaagaaattt ttattcaggg aaaagttagt tcgccaggct
      121 tcgtttatgg ataatatgcg gtcgtatcag cagagacaag ggagtttagt ctctttatca
      181 ccaacacaac tgttgtggtt aactgaaaaa tggcaaatgg cagtacacgt aacaaatatg
      241 ataaagatga aggtgccaat gtgcaagtta ttcttcgttg caagtttgtt cactataaga
      301 aaaattgtca tttgttgacg atattttagt gacaactcat tatttggttg aaaatgcctc
      361 gctatgatga tcgatatggt acaactcgtt atgatgatcg atatggtaca actcgttatg
      421 atgatcgata tggtacaact cgttatgatg atcgatatgg tacaactcgt ttgtatgtcg
      481 gccatttgtc ttcacggaca cgctctcgtg atttggagta cctttttagc aaatatggga
      541 gagtacgaga tgtggatatg aagcatgact ttgcatttgt tgattttaga gatccccgtg
      601 atgctgatga tgcaagatat agcttgaatg gtagagactt gaatggcagt cggcttattg
      661 tggaatttgc aaagggtact ccacgtggac ctggcggatc tagagaatat ttaggtagag
      721 gaccacctcc tagtttaggg cggtgtttca actgtgggct tgatggtcac tgggctcgag
      781 actgcaaagc tggtgactgg aagaacaaat gttaccgatg tggtgaaagg ggccacattg
      841 aaaggaactg ccaaaatagt cctaaaaaac tcaaacgtgg tcgtagctac tcaaggtcac
      901 ctgtgcgatc acgctctccc cgtcgtcaca gaaaccggag tccaagctac agtagaagtc
      961 ccagtcattc gagatctcca aagaaggaac gtatagtggt gcgtgaaaga acaaggagcc
     1021 ctcgtgattc taggagccca agccgcagcc ctggttcacc acctcccacc ataggaagag
     1081 agcgcagccc aactccaact gaagacagag tcagcccttc gcctagtcca caaagagcaa
     1141 agagccaaag tcctacaagc agtccagttg aagccaatgg tcacagccgt agtccaagcc
     1201 ctgtgtttga gcagagcccc gaagacccta atggtgctgc tggcgaggag accctggttg
     1261 accatgatgt ccctgcagct cagggtagcc cagttgacga agatggtcta gttgttgaag
     1321 gaactcctgt tgatggtgat gaagagaatc taccaggtag tgagtgatgt aatactgtgt
     1381 tgaaaataag ccgtggttat attacagtaa cttactgaag aactatgtct gttttgtgtt
     1441 ttttttgttt tttgtttttt ttttttgttt tttgttatgg aggaatggtt gtaacagttt
     1501 gaacttacat ctttggcttt aataccttga cctcctaata tgatatgagc tatcaaga
//
LOCUS       XM_071829469            1464 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839408), transcript variant X3, mRNA.
ACCESSION   XM_071829469
VERSION     XM_071829469.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1464
                     /gene="LOC139839408"
                     /note="uncharacterized LOC139839408; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839408"
     CDS             260..1273
                     /gene="LOC139839408"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685570.1"
                     /db_xref="GeneID:139839408"
                     /translation="MPRYDDRYGTTRYDDRYGTTRYDDRYGTTRYDDRYGTTRLYVGH
                     LSSRTRSRDLEYLFSKYGRVRDVDMKHDFAFVDFRDPRDADDARYSLNGRDLNGSRLI
                     VEFAKGTPRGPGGSREYLGRGPPPSLGRCFNCGLDGHWARDCKAGDWKNKCYRCGERG
                     HIERNCQNSPKKLKRGRSYSRSPVRSRSPRRHRNRSPSYSRSPSHSRSPKKERIVVRE
                     RTRSPRDSRSPSRSPGSPPPTIGRERSPTPTEDRVSPSPSPQRAKSQSPTSSPVEANG
                     HSRSPSPVFEQSPEDPNGAAGEETLVDHDVPAAQGSPVDEDGLVVEGTPVDGDEENLP
                     GSE"
     misc_feature    374..583
                     /gene="LOC139839408"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    <626..793
                     /gene="LOC139839408"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 ctaggtctaa atcgaatttt ggggaaaatt gataaggttc gttcatatcg ctaattactc
       61 accaagtcgc aaaattattt gaagaaattt ttattcaggg aaaagttagt tcgccaggct
      121 tcgtttatgg ataatatgcg gtcgtatcag cagagacaag ggagtttagt ctctttatca
      181 ccaacacaac tgttgtggtt aactgaaaaa tggcaaatgg cagtacacgt aacaaatatg
      241 ataaagatga aggttgaaaa tgcctcgcta tgatgatcga tatggtacaa ctcgttatga
      301 tgatcgatat ggtacaactc gttatgatga tcgatatggt acaactcgtt atgatgatcg
      361 atatggtaca actcgtttgt atgtcggcca tttgtcttca cggacacgct ctcgtgattt
      421 ggagtacctt tttagcaaat atgggagagt acgagatgtg gatatgaagc atgactttgc
      481 atttgttgat tttagagatc cccgtgatgc tgatgatgca agatatagct tgaatggtag
      541 agacttgaat ggcagtcggc ttattgtgga atttgcaaag ggtactccac gtggacctgg
      601 cggatctaga gaatatttag gtagaggacc acctcctagt ttagggcggt gtttcaactg
      661 tgggcttgat ggtcactggg ctcgagactg caaagctggt gactggaaga acaaatgtta
      721 ccgatgtggt gaaaggggcc acattgaaag gaactgccaa aatagtccta aaaaactcaa
      781 acgtggtcgt agctactcaa ggtcacctgt gcgatcacgc tctccccgtc gtcacagaaa
      841 ccggagtcca agctacagta gaagtcccag tcattcgaga tctccaaaga aggaacgtat
      901 agtggtgcgt gaaagaacaa ggagccctcg tgattctagg agcccaagcc gcagccctgg
      961 ttcaccacct cccaccatag gaagagagcg cagcccaact ccaactgaag acagagtcag
     1021 cccttcgcct agtccacaaa gagcaaagag ccaaagtcct acaagcagtc cagttgaagc
     1081 caatggtcac agccgtagtc caagccctgt gtttgagcag agccccgaag accctaatgg
     1141 tgctgctggc gaggagaccc tggttgacca tgatgtccct gcagctcagg gtagcccagt
     1201 tgacgaagat ggtctagttg ttgaaggaac tcctgttgat ggtgatgaag agaatctacc
     1261 aggtagtgag tgatgtaata ctgtgttgaa aataagccgt ggttatatta cagtaactta
     1321 ctgaagaact atgtctgttt tgtgtttttt ttgttttttg tttttttttt ttgttttttg
     1381 ttatggagga atggttgtaa cagtttgaac ttacatcttt ggctttaata ccttgacctc
     1441 ctaatatgat atgagctatc aaga
//
LOCUS       XM_071829470            1304 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839408), transcript variant X4, mRNA.
ACCESSION   XM_071829470
VERSION     XM_071829470.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1304
                     /gene="LOC139839408"
                     /note="uncharacterized LOC139839408; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839408"
     CDS             100..1113
                     /gene="LOC139839408"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685571.1"
                     /db_xref="GeneID:139839408"
                     /translation="MPRYDDRYGTTRYDDRYGTTRYDDRYGTTRYDDRYGTTRLYVGH
                     LSSRTRSRDLEYLFSKYGRVRDVDMKHDFAFVDFRDPRDADDARYSLNGRDLNGSRLI
                     VEFAKGTPRGPGGSREYLGRGPPPSLGRCFNCGLDGHWARDCKAGDWKNKCYRCGERG
                     HIERNCQNSPKKLKRGRSYSRSPVRSRSPRRHRNRSPSYSRSPSHSRSPKKERIVVRE
                     RTRSPRDSRSPSRSPGSPPPTIGRERSPTPTEDRVSPSPSPQRAKSQSPTSSPVEANG
                     HSRSPSPVFEQSPEDPNGAAGEETLVDHDVPAAQGSPVDEDGLVVEGTPVDGDEENLP
                     GSE"
     misc_feature    214..423
                     /gene="LOC139839408"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    <466..633
                     /gene="LOC139839408"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 caatttctgt ttcagaatat aaaaaccgga gatttctaac tacatcttca caagttctag
       61 gtctaaatcg aattttgggg aaaattgata aggttgaaaa tgcctcgcta tgatgatcga
      121 tatggtacaa ctcgttatga tgatcgatat ggtacaactc gttatgatga tcgatatggt
      181 acaactcgtt atgatgatcg atatggtaca actcgtttgt atgtcggcca tttgtcttca
      241 cggacacgct ctcgtgattt ggagtacctt tttagcaaat atgggagagt acgagatgtg
      301 gatatgaagc atgactttgc atttgttgat tttagagatc cccgtgatgc tgatgatgca
      361 agatatagct tgaatggtag agacttgaat ggcagtcggc ttattgtgga atttgcaaag
      421 ggtactccac gtggacctgg cggatctaga gaatatttag gtagaggacc acctcctagt
      481 ttagggcggt gtttcaactg tgggcttgat ggtcactggg ctcgagactg caaagctggt
      541 gactggaaga acaaatgtta ccgatgtggt gaaaggggcc acattgaaag gaactgccaa
      601 aatagtccta aaaaactcaa acgtggtcgt agctactcaa ggtcacctgt gcgatcacgc
      661 tctccccgtc gtcacagaaa ccggagtcca agctacagta gaagtcccag tcattcgaga
      721 tctccaaaga aggaacgtat agtggtgcgt gaaagaacaa ggagccctcg tgattctagg
      781 agcccaagcc gcagccctgg ttcaccacct cccaccatag gaagagagcg cagcccaact
      841 ccaactgaag acagagtcag cccttcgcct agtccacaaa gagcaaagag ccaaagtcct
      901 acaagcagtc cagttgaagc caatggtcac agccgtagtc caagccctgt gtttgagcag
      961 agccccgaag accctaatgg tgctgctggc gaggagaccc tggttgacca tgatgtccct
     1021 gcagctcagg gtagcccagt tgacgaagat ggtctagttg ttgaaggaac tcctgttgat
     1081 ggtgatgaag agaatctacc aggtagtgag tgatgtaata ctgtgttgaa aataagccgt
     1141 ggttatatta cagtaactta ctgaagaact atgtctgttt tgtgtttttt ttgttttttg
     1201 tttttttttt ttgttttttg ttatggagga atggttgtaa cagtttgaac ttacatcttt
     1261 ggctttaata ccttgacctc ctaatatgat atgagctatc aaga
//
LOCUS       XM_071829471            4554 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter B family
            member 19-like (LOC139839409), mRNA.
ACCESSION   XM_071829471
VERSION     XM_071829471.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4554
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4554
                     /gene="LOC139839409"
                     /note="ABC transporter B family member 19-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139839409"
     CDS             1..4554
                     /gene="LOC139839409"
                     /codon_start=1
                     /product="ABC transporter B family member 19-like"
                     /protein_id="XP_071685572.1"
                     /db_xref="GeneID:139839409"
                     /translation="MEESSYEIDQHGGSPFTDRPNHTTPPQSYKSPPVSYYSPHTYPF
                     PSTSQRTHNYNARVPPTTPFASDHDQSWQADISWQFEPNAWKDNHSSALGAALSPWTG
                     PAPSPSPSPPPSAGSSRRVFRQSAKDFYLSGTSGNITNPHYYDFSNVPSSSSGRIELQ
                     SYVADQQPNTSSFIGGYIKSPTFANLTSSSRSARKSDYLIDNNEDIEDEVTPYKQDPR
                     WLSVSHAYFDGHNSPTLNGISFTSYDYQHSIHGGYDADAGQFSRTPQYLQSYVQEGRQ
                     EFDEDEDEDDDEVVPPKTMGIFGLFKYSTKLDMFLVIIGCLGALINGGSLPWYSYLFG
                     NFVNEIASEDNKDQMMKDVRKVCVLMAGLAGIVVIGSYLQIACWRLVGERSAHRIRTK
                     YLRAVLRQDVSFFDRDISTSDIMHGISSDVAQIQEVMGDKMAHFMYHIFTFICGYTVG
                     FLKSWKVSLAVLAVTPLTMFCGIAYKAVYVGLATKEVNSYKKAGGIAEQAISSIRTVL
                     SFVAEENLAARYDAVLEESVPVGKKLGFAKGIGIGVIYLVTYATWALAFWYGSILVAR
                     NELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAASRVFEVIDRIPAVDPYSTI
                     GRKPESVRGKLELKSVTFAYPSRPNLPILNSLNLIIPSRSTSALVGASGAGKSTIFAL
                     LERFYDPIQGLVLLDGQDIRTLQVKWLRSQMGMVGQEPVLFAGTILENILMGKENATK
                     NEATTACIAVNAHKFITDLPLGYDTQVGDKGTQLSGGQKQRIALARAMIKNPKILLLD
                     EPTSALDPTSESLVQEAIDKISKGRTTIVIAHRLATVKNAETIVVLEQGSVVEIGDHN
                     QLMLQEGAYFSLIKLASESVSSNQPMSEKAIINHEASSAYDLLRSNHVYEISVVSGYM
                     KSVQDANKKETVKENKTSSYTISQVWKLQKPEGALLFVGVMFGTLAGAILSLFPLVLG
                     QALVYYFNPDKSKLKKDVGYLCLALVGLGLGCILTMTGQQGFCGWAGTKLTKRVRDSL
                     FRSILKQEPGWFDSDHKSSGSLVSKLSIDCVSFRSVLGDRYSVLFMGLSSAAVGLSVS
                     FYLEWRLALLATILTPFTLGASYFSLIINIGSKLDNGCYDKASSIASGAVSNIRTVAT
                     FATQENIVQSFEQSLLKPKSTSIKRSQITGIALGFSQGAMYSAYTLVLYSGAYLVEHE
                     FTRFGDVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPSVFEIINRDPLIVGNGSKK
                     IESWKLFDIEFKKVSFAYPSRPDVIVLRDFSLKVKSGSMVAVVGGSGSGKSTVVWLTQ
                     RFYDPIRGQVLMGGMDLRDVDVKWLRLQTAVVSQEPALFAGSIRENIRFGNPNASWSE
                     IEEAAKQAYIHNFITGLPQGYETQVGESGIQLSGGQKQRIAIARAIVKNSKVLLLDEA
                     TSALDLESEKIVQDALRNITKRTTTILVAHRLSTIREANAIAVVQDGKVCEYGTHDTL
                     MANHHHGIYATLVRSEMEANVFA"
     misc_feature    898..2613
                     /gene="LOC139839409"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; Region: MdlB;
                     COG1132"
                     /db_xref="CDD:440747"
     misc_feature    2785..4539
                     /gene="LOC139839409"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; Region: MdlB;
                     COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 atggaggaat cttcatatga gatagaccaa catggcggct caccgtttac tgaccggcct
       61 aaccacacaa ctccgccaca atcctacaaa tcaccacctg tatcatacta cagccctcac
      121 acatacccat tcccatcaac atcacaaaga acacataatt ataatgcacg tgtacctccc
      181 accacacctt ttgcctctga ccatgaccaa tcatggcaag ccgacatctc atggcagttt
      241 gagcccaatg cctggaaaga caatcacagc agcgctcttg gtgctgcgct cagcccatgg
      301 accgggccag caccatcacc ctcaccctca ccgcctcctt cagcaggcag tagccgccgt
      361 gtgtttcgcc agtcagctaa ggacttttac ctgtctggca cttctggtaa tattactaat
      421 ccacattatt atgatttttc caatgtaccg tcttcttctt ctggtagaat tgagcttcaa
      481 agctatgttg ctgatcaaca accaaatact agttcattca ttggtggcta cataaagtct
      541 ccaacttttg caaatttgac tagtagtagt cgtagtgcaa gaaaaagcga ctatttgata
      601 gataataatg aagatataga ggatgaagta acaccatata aacaagatcc acgctggttg
      661 tctgtctcac atgcttattt tgatggtcat aatagcccaa ctcttaatgg gatttcgttt
      721 acaagttatg actatcaaca tagcatccat ggtggttacg atgcagatgc tggacaattt
      781 tcacgtactc cgcagtatct tcaaagttat gtgcaggaag gacgacaaga gtttgatgaa
      841 gatgaagatg aggatgatga tgaggttgtg ccaccgaaaa ctatggggat ttttggtttg
      901 tttaagtatt caacaaaact ggatatgttt cttgtaataa taggttgttt gggtgctttg
      961 ataaatggag gatctttacc atggtattct tatctttttg gaaactttgt caacgaaatt
     1021 gcttcagaag ataacaagga tcagatgatg aaagatgtca gaaaggtatg tgtgcttatg
     1081 gcgggtttag caggaatagt tgtaattgga tcctacttac agattgcttg ttggaggttg
     1141 gtaggagagc gatctgctca tagaataaga accaaatacc taagggctgt tttgagacaa
     1201 gatgtgagct tctttgacag agacattagt actagtgata tcatgcatgg aatctcaagt
     1261 gatgttgctc aaattcaaga agttatggga gataagatgg cacatttcat gtatcacata
     1321 ttcaccttca tatgtggcta cacagtcggt ttcttaaaat cttggaaggt ttctcttgcg
     1381 gtgttggctg ttaccccgtt aacaatgttt tgtggcatcg cttataaggc agtctatgtt
     1441 ggccttgcta ccaaggaagt gaattcttac aagaaagctg gtggcatagc agaacaagcc
     1501 ataagttcaa ttagaactgt attatctttt gtagcagaag agaacttggc agcaagatat
     1561 gatgcagttc tggaagagtc tgtcccggtg ggaaagaaac tcggttttgc aaaaggtata
     1621 ggtatcggtg taatatactt ggttacttat gccacatggg cattagcttt ctggtacgga
     1681 tccatcttgg ttgcaagaaa cgaattatct ggtggtgcag ccattgcttg tttctttggc
     1741 gtcaatgttg gtggcagggg tttggcgtta tctttatcat actttgctca atttgcacaa
     1801 gggaccgtag cagctagcag agtgtttgag gttatagata ggatcccagc cgttgatcct
     1861 tatagtacaa tagggagaaa acctgagagt gtacgtggta aactggaact aaaaagtgtt
     1921 acttttgctt acccatctcg cccgaatctc ccaattctca attctctaaa tttgataatt
     1981 ccttctcgaa gtacgtcagc actagttggt gctagtggag ctggcaagtc taccattttt
     2041 gctcttttag agagattcta tgatcctatt cagggtttgg tattgttgga tggtcaagat
     2101 ataaggactt tgcaagtgaa atggctaaga agtcaaatgg gtatggtggg tcaagagccg
     2161 gtcctttttg ccggcacaat tcttgaaaat attctgatgg gcaaagagaa tgccacaaag
     2221 aatgaggcaa caacggcttg catcgctgta aatgctcata aattcataac tgatctacca
     2281 ctaggctatg acactcaggt tggagataaa ggaactcagc tctctggggg tcaaaagcag
     2341 cgcattgcat tggctcgtgc gatgattaaa aatcccaaga tccttctctt agacgagccc
     2401 acaagtgcct tagatccgac atctgagtct cttgttcagg aggcaattga taaaatctca
     2461 aaagggagaa ccacgattgt gattgctcac aggctagcaa ctgtcaagaa tgctgaaaca
     2521 atcgttgttc ttgaacaagg atctgtcgtt gagataggag accataatca gctcatgcta
     2581 caagaaggag cctacttttc tttgatcaaa cttgcatccg aatctgtatc atcaaaccaa
     2641 cccatgtcag aaaaggctat aataaaccat gaagcatcaa gtgcttatga tttattaaga
     2701 tctaatcatg tatacgagat atcggtggtg tctggataca tgaaatcagt tcaagatgca
     2761 aacaaaaaag aaacagtaaa agaaaacaaa acgagctcat acacaatttc tcaagtatgg
     2821 aaactacaga aaccggaagg tgctcttttg tttgtaggtg taatgtttgg tacgctagca
     2881 ggtgctattc tatccctatt tccattggtt ttaggccaag cactggtata ctatttcaat
     2941 ccagataagt ctaaattaaa gaaagatgtc gggtacctat gtttggcgct agttgggctc
     3001 gggttaggtt gtattctaac catgactggt caacaaggtt tctgcggttg ggccggtaca
     3061 aaactcacca aacgggttcg tgattcccta tttcggtcta tcctgaaaca agagcctggt
     3121 tggttcgact cagaccacaa atcatcagga tcgctagtat caaagctatc cattgactgt
     3181 gtaagtttca ggtcagttct aggagacaga tactcggtcc tattcatggg attaagttca
     3241 gctgctgttg gtctaagcgt ctcgttttat ctggaatgga ggttagccct tttggctact
     3301 attctaaccc ctttcacact cggcgctagc tatttcagtt tgatcattaa catcggttcg
     3361 aagctagata atggttgtta tgacaaagca agtagtatag cttcaggtgc agtatcaaac
     3421 attcgaacag tagcaacttt tgcaacacaa gaaaatatag ttcaatcatt tgagcaatct
     3481 ctattaaagc ccaaatcaac ttctataaaa agatcacaaa ttacaggtat agcattaggg
     3541 ttttcacaag gtgcaatgta ctctgcttat acactggttt tatattctgg agcttacctt
     3601 gtagaacacg aattcacaag atttggtgac gtgtacaaga ttttcctgat tcttgtattg
     3661 agctcgtttt ctgttggtca actggccggt cttgcgccag atacatcaat ggcagctact
     3721 gcaattccat ctgtttttga aatcatcaac agggatccat tgattgttgg aaatgggagt
     3781 aaaaagattg aaagttggaa gctttttgat atagagttca agaaggtgag ttttgcatac
     3841 ccatcaaggc ctgatgtgat tgtgttgagg gattttagtc taaaggtaaa aagtgggtcc
     3901 atggtggcgg tggtgggagg tagtggttca gggaagtcaa cggtagtgtg gttgactcaa
     3961 agattttatg atccaattag agggcaagtg ttgatgggcg gaatggatct gagagatgtt
     4021 gatgtgaaat ggttgagatt acaaaccgct gtggtgagtc aagaacctgc attgtttgct
     4081 ggtagtatta gagaaaatat aagatttggg aaccctaatg cttcatggtc agaaattgaa
     4141 gaagctgcta aacaagctta cattcacaat ttcatcactg gactacctca aggttatgaa
     4201 actcaggtgg gtgagagtgg gattcagcta tcagggggtc agaaacagag gatagcaata
     4261 gcaagggcta tagtaaagaa ttcaaaggtg ttattactag acgaagcaac aagtgcactt
     4321 gatttggaat ccgagaagat tgttcaagac gcgcttagga atatcaccaa acgtaccacc
     4381 actattttgg tggctcaccg cctctccacc atcagagaag ccaatgctat agcagtggtc
     4441 caagatggta aggtgtgtga atatggaact catgacacac tcatggctaa tcatcatcat
     4501 ggtatttatg ctacccttgt acgttctgaa atggaagcca atgtttttgc ttaa
//
LOCUS       XM_071829472            1872 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839410), mRNA.
ACCESSION   XM_071829472
VERSION     XM_071829472.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1872
                     /gene="LOC139839410"
                     /note="uncharacterized LOC139839410; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839410"
     CDS             1..1872
                     /gene="LOC139839410"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685573.1"
                     /db_xref="GeneID:139839410"
                     /translation="MTSLTPGILLKLLKTINSAVKVRGEHRSILLQVISIVPALNGSE
                     LWPNHGFFIKISDSSHSTYAQLSKEDNELILNNKLQLGQFFWVDRMDVGTPVPILDGV
                     RPVPGRHPFIGNPKDLMQMLEPSEAAKKSSQELVETKQESRKKKFVIKEEKVTVASRY
                     MQGVVPKNDKDENERNGIIKCRQQQQQEIKDQGQRTSSLGKSCNALRPQAGAGPLTTK
                     QENVNLNLVQKRRDKINNSEIRSWTSLSTRLVNPAKGMIRRRTLASFVVAEAQKEAMT
                     ATNLVKCIGMFGELCSSASHAKPHESMAKFFTLYDLIIQENGSIAPPTKDDKCILLSS
                     SSPALENNKEKSEKKTGLARGGKCIQKTQKTTAMELLSVADKLEWANGDGLKEAKELR
                     EILLEETQSWFLKFLGKALDVGFQMETVKGKGKNQNQNQDKPQILVILSHLKNANEWL
                     DELRRKMILQNNEDVVETIDLVKQKIYSCLLVQVDSAAFDRCWLAGWKLSLQLVGWLV
                     SWVSESKSRWMCLLTAAAVEEEEEVIGLVCVEVWLPKRKVISSSEATCGGWREVGVGE
                     DGGCRVRGGFSMTLSVGVFVLFGVTSGFGQSDNLPCGYLVSDLGEESIFSGLDFSLR"
     misc_feature    10..1464
                     /gene="LOC139839410"
                     /note="Plant protein of unknown function (DUF936); Region:
                     DUF936; pfam06075"
                     /db_xref="CDD:461821"
ORIGIN      
        1 atgacatctc ttacaccagg aatacttctg aaactactta aaactattaa ttctgctgta
       61 aaagttcgtg gtgaacatcg atcaatcctc ttgcaagtaa tcagcattgt gcctgcctta
      121 aacgggtccg aattatggcc aaaccatggg ttcttcatca aaatatcaga ttcatcccac
      181 tccacatatg cacaactatc gaaagaggat aacgagctaa ttttaaacaa taaactgcaa
      241 ttgggccaat tcttttgggt cgatcggatg gatgttggca cgccagttcc cattttagat
      301 ggggtgaggc ccgttccagg ccgacatccg ttcattggga acccaaaaga tttgatgcag
      361 atgttagagc catctgaagc agctaagaaa tcgagtcaag aattggtgga aacgaaacaa
      421 gaaagtagaa aaaagaaatt tgtgatcaaa gaggagaaag ttacagttgc atcaaggtat
      481 atgcaaggag ttgtgcccaa aaatgataag gatgaaaatg agagaaatgg cataatcaag
      541 tgcagacaac aacaacaaca ggagattaaa gatcaagggc aaaggacatc aagtttaggt
      601 aagtcttgca atgcattaag accacaagca ggtgctggac cgttaacaac taagcaagaa
      661 aacgtcaact taaacttggt gcaaaaaagg agagataaaa tcaataattc tgaaatacgt
      721 tcatggacat ccctgtccac gagactagta aatcctgcca aggggatgat aagaagaaga
      781 accttagctt cttttgtggt ggcagaagct caaaaggaag ccatgacagc aacaaatctt
      841 gtgaaatgca tcggaatgtt tggtgaactt tgttcatccg cttcacacgc aaaaccccac
      901 gagtctatgg ccaagttctt cacactttac gacctaatta ttcaagaaaa tggcagtatt
      961 gcgcccccca ccaaggacga caaatgcatt ctgctatcaa gtagctcacc agcactagaa
     1021 aataataagg aaaaatctga aaagaagaca gggcttgctc gaggaggtaa atgtatacaa
     1081 aagacccaaa agacaactgc aatggagctg ctaagtgttg ctgataaact agaatgggct
     1141 aatggagatg gattaaaaga ggccaaagag ttgagagaga ttctgttaga agaaacacaa
     1201 tcttggtttt taaaattctt gggaaaagca ctcgatgttg ggtttcaaat ggaaactgtt
     1261 aaagggaaag gtaaaaatca aaatcaaaat caagataagc ctcagatttt ggtaatatta
     1321 tctcatctca agaatgcaaa cgaatggctg gatgaactaa gaagaaagat gattctacaa
     1381 aacaacgaag atgttgtgga gactattgac cttgtaaagc aaaaaatata ctcttgtttg
     1441 cttgttcaag tagactctgc tgcattcgat cgctgctggc tggctgggtg gaagttaagt
     1501 ttgcaactgg ttgggtggtt ggttagttgg gtgagtgaaa gtaaaagtag atggatgtgt
     1561 ttacttacag cagcagcagt agaagaagaa gaggaagtta ttggtttggt gtgtgttgaa
     1621 gtttggttgc caaaaagaaa agtgattagt agtagtgaag ccacttgcgg cggttggagg
     1681 gaggtgggtg taggggaaga cggtggttgt agggtacgtg gtggatttag tatgacttta
     1741 tccgtgggtg tgttcgtcct tttcggggtc acctccgggt ttggacaaag cgacaatctc
     1801 ccatgtggat atctggtttc ggatttgggg gaggagtcga ttttttctgg tttagacttc
     1861 tctttgagat ga
//
LOCUS       XM_071829473             640 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839412), mRNA.
ACCESSION   XM_071829473
VERSION     XM_071829473.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..640
                     /gene="LOC139839412"
                     /note="uncharacterized LOC139839412; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839412"
     CDS             128..472
                     /gene="LOC139839412"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685574.1"
                     /db_xref="GeneID:139839412"
                     /translation="MEEMQLLRYKSLFEQIDDCSSPESERIIRLKEQLHYEKICSEKL
                     EKKARELEEKHKDLASGISTLKAEREINKSEIKSLKQQVLATKEWFQPEEDEVYNIQD
                     IMEKGCVSVSIS"
     misc_feature    197..>412
                     /gene="LOC139839412"
                     /note="Condensing enzymes; Family of enzymes that catalyze
                     a (decarboxylating or non-decarboxylating) Claisen-like
                     condensation reaction. Members are share strong structural
                     similarity, and are involved in the synthesis and
                     degradation of fatty acids, and the...; Region:
                     cond_enzymes; cl09938"
                     /db_xref="CDD:447866"
ORIGIN      
        1 tatgattaat tagtaatgca caatacccct taaccacttt taactaatca acttaccaca
       61 ggaggtgcga tcaaataaac atgaagggga atgcaattca actattgggc aattgcaaga
      121 agacaaaatg gaagaaatgc agttattaag atataagagt ttattcgaac aaattgatga
      181 ttgttcaagt cccgaatctg agagaataat ccgtttaaag gaacaacttc attatgaaaa
      241 aatatgttca gaaaagcttg agaaaaaggc tagagaactc gaagaaaagc ataaggatct
      301 ggcttcaggg atctctacct taaaggcaga aagagaaata aataaaagtg aaattaaatc
      361 ccttaagcaa caggtacttg ctacaaaaga atggttccag ccagaagaag atgaagtata
      421 taacatccaa gacatcatgg aaaaaggctg tgttagtgtt tccatttcat aatcaaccaa
      481 atccctccac ttccagcgtc ttttcatact ataaattccc tctccctgga cccgagatag
      541 aattccctaa gtagttaggg aatatttggt gtggaatatt tatctcctac actctaccaa
      601 atactaaatt gtttctttgt tcaatacttg agattttatt
//
LOCUS       XM_071829474            1853 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450 81D1-like
            (LOC139839413), mRNA.
ACCESSION   XM_071829474
VERSION     XM_071829474.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1853
                     /gene="LOC139839413"
                     /note="cytochrome P450 81D1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139839413"
     CDS             100..1626
                     /gene="LOC139839413"
                     /codon_start=1
                     /product="cytochrome P450 81D1-like"
                     /protein_id="XP_071685575.1"
                     /db_xref="GeneID:139839413"
                     /translation="METLHFYILLLGLAWSIFNKYFVPKLRNLPPTPLSASAVILLRL
                     FKQPLCRTLSQISNQHGPILLLRFGFRRVLLVSSSSAAEELFSTNDAVFANRPKLLPG
                     KQFGCNYTTLAWAPHGHVWRHLRSVSCLEILPFHRVPNQQESFNEEIKVMLGRLLNTQ
                     EKTVELRLMFLDLVFHVMMRMFAGKRYCRNNMTAKGEVMESISLQEYVTRSFRMTTEE
                     TDVGYFMPILKLFGLKSLDQRCKKLQEIGDSLMDGLIEEIKRTAPDFSDISGDTQETV
                     IEFLLDKQKTDPKNYSDQKIRGLVLGLMSAGTTTSSGIMEWAFSLLLSHPEVLKKAQD
                     EIDNYIGNDRFIDQSDIDHLPYLRCIVKETMRMYPVAPLLVPHESSRECRVSGYNVPK
                     GTMLMVNVWAIHNDPNVWTEPTKFSPERFEKTINERDGFKLMPFGYGRRSCPGKHMAT
                     RMIHLTLGSLIHCFDWERVSEKMVNGMTEKTGMALLKAQPLVARGRPRLKMEKLLSQI
                     "
     misc_feature    280..1572
                     /gene="LOC139839413"
                     /note="cytochrome P450 family 81; Region: CYP81; cd20653"
                     /db_xref="CDD:410746"
     misc_feature    order(385..387,460..462,472..474,496..498,631..633,
                     1006..1008,1015..1020,1027..1032,1207..1209,1219..1224,
                     1228..1230,1402..1413,1420..1434,1441..1446)
                     /gene="LOC139839413"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410746"
     misc_feature    order(730..732,742..744,817..819,1003..1005,1012..1017,
                     1222..1224)
                     /gene="LOC139839413"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410746"
     polyA_site      1853
                     /gene="LOC139839413"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataggtaaac tttatcacct tttctggtta taaatgctca tgaggaaccc ataatttagt
       61 aagttggaaa tcctagcaga tagctttaca tccaaatata tggaaaccct tcacttctac
      121 atcttgcttc taggcttagc ctggtccata tttaacaaat attttgttcc caaattaaga
      181 aatctgcccc caactccatt atcggcttca gccgttatac tcttacgctt attcaaacag
      241 cccctctgcc gaaccctttc ccaaatatct aatcaacatg gaccgattct actcttacgc
      301 tttggtttca ggcgtgtcct tcttgtatct tcctcatcgg ccgccgaaga acttttctct
      361 actaatgatg cggtgtttgc caacagaccc aagttgctgc ctggcaagca atttggttgc
      421 aactacacta cgctcgcttg ggcacctcat ggtcatgtgt ggcgtcacct tcgtagtgtc
      481 tcgtgtcttg aaatccttcc gtttcataga gtacctaacc agcaggagtc ttttaatgaa
      541 gaaataaagg taatgttagg cagacttttg aatacacagg agaaaacagt agagctaaga
      601 ctcatgtttc ttgaccttgt gtttcatgtg atgatgagaa tgtttgctgg aaaaagatat
      661 tgtcgaaata acatgacagc aaagggggag gtgatggaat caatttcatt gcaagaatat
      721 gtgactcggt catttaggat gacgaccgaa gagactgatg ttgggtattt tatgcctata
      781 ttgaagcttt ttggactgaa aagtttggat caaaggtgca agaaattgca agaaattgga
      841 gattctctca tggacggctt aattgaagaa ataaaaagaa cggcacctga tttttctgat
      901 atatctggcg acacacaaga aacagtgatc gagtttttgt tggataaaca gaaaactgat
      961 cctaaaaatt actctgatca aaagattaga ggacttgtgc taggcttaat gtcagctggt
     1021 actactacat catcaggcat aatggagtgg gcattttctc tattattaag ccatccagaa
     1081 gtgctaaaga aagcacagga tgaaattgat aattacatag gaaatgaccg tttcattgat
     1141 cagtcagaca tagaccatct tccgtatctt cgatgcattg tgaaggagac aatgcgaatg
     1201 tacccggtag cccctttgct tgtcccacat gagtcatcaa gagaatgtag agttagcggg
     1261 tataacgtgc ctaaaggcac catgttaatg gtcaatgttt gggctattca caatgatcct
     1321 aatgtgtgga ctgaacccac aaagtttagc ccagagcgat ttgaaaaaac gatcaatgaa
     1381 agagacggat ttaagctaat gccgtttgga tatggaagga ggagttgtcc tgggaagcat
     1441 atggcgacac gtatgatcca tttgactttg ggttcactta tacattgttt cgactgggaa
     1501 agggttagcg agaagatggt taacggcatg actgaaaaaa ccggaatggc gttgctcaag
     1561 gcgcaaccac tagtggctag aggtcgcccg cgtctgaaaa tggagaaatt actttctcaa
     1621 atttgagcaa gggtaataat gttaaagctt tagcattatt tatgtgacaa atatggcctt
     1681 tcagtttgat gatactcagt attatgttga gtcatcagta ttatttagat aataattgct
     1741 ttgtggtgat ctatcgcaag tcatgatgaa aatgagtatg gtttcctagg tgtcccacct
     1801 atcccaatca tgttgtaaat ttatccacct taatctttca atatttcaat caa
//
LOCUS       XM_071829475            6151 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RPS4B-like (LOC139839415), mRNA.
ACCESSION   XM_071829475
VERSION     XM_071829475.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6151
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6151
                     /gene="LOC139839415"
                     /note="disease resistance protein RPS4B-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839415"
     CDS             476..5965
                     /gene="LOC139839415"
                     /codon_start=1
                     /product="disease resistance protein RPS4B-like"
                     /protein_id="XP_071685576.1"
                     /db_xref="GeneID:139839415"
                     /translation="MISYASSSSSSSSSSTSSSIRVSKGYDIFVSFRGEDTRTGFTSH
                     LYEALTRKRIRTYEDDKSLETGSFIATELLRAIEVSKFAIVVLSRNFATSKWCLGEIV
                     KIVDCMELGKLVVIPVFYHVSPSDVRHQRGCYVQGFTNHEENPEIPLQMVETWRAAFK
                     KLGAISGLHVTQDRKESEVVNEIVKRVLTGLQVTLPTSLPDGLVGIESRLNEMKRILN
                     MESSEVRFIGICGMSGVGKTTLAEVVYQAIQKEFQESSFIENIKDISKEHDRDLCKFQ
                     QKILDDILKGESIPVRSVIDGQTLLKTKLRDLKVIIVLDDVNHAEQLTYLAGGREWFG
                     NGSRIIITTTNTDLLNPPKIDATYVCEELEGDEALSLFCQSAFGGHSTNGYENLSKDI
                     VKLAGGLPLALNVYGSLLCGKEERYWKEILKKFQENPHKKVVERLEIGYARLDKNEQD
                     TFRYIACFLKGRDKDLVKDILTDIGLYPECGITDLINKFLITFDYEDRVWMHDLLQQM
                     SWEILRKDSERDNGKYIAIKRRQDIQYIFSSKPERMRTLEIINQEPYKVQEEVCFDDP
                     TCFSMMMKLRFLRISNIGFSQGLDYLSNDLRILEWYGCSLKSLPPTFAPNHIFELDMC
                     CSQLETLWDKDLDLPNLRSINLSFSTNLINIPNLTSTPKLLILNLEGCTKLKELHESV
                     LFHKRLRYMNLNGCGLLQSLGGCNMEMDALEALHLSGCSNLEYIPEFGLNMKHLEHLY
                     VDGTKIKKLPESLGKMCNLRKLDVSETSIEEISSSMYQLKRLRYLRVHGCTRLSPSRG
                     FLYTNLDTISFIRELDLSYCNLSAVPDGIGLLCRVVKLDLSGNNFVLLPASISLLSNL
                     RMLYLNNCKRLQSLPKLSIVNEETHYGLQIRFNYYISRGGTVLSRFRAPNNYGCPTVS
                     CLNCPRLAENENGSYLVDKILNSYLQLRTKHWITPAAVFEIVGAGSNIPSSFKLMTFG
                     KNVIHEGPWIGVVICAVIAVNQIDAFMDVKYTVTAHIHVGEKHSMIPIPINFLMANVE
                     NQLIFYWTDSDDLLRTVDSHQKNFSFSFSVDPGDGNVEVTKFGVRFIREGDIFELKRL
                     EDSTSKVVHYLFESCFKEGRVQRNNWGKVISLPDRHSAINDLTIRTTNIFLNYRKRRY
                     SLNDIHKIFNSLNEIAQEVLCECKEEWRHSEVITLVHDYYRISLETSQLYKYFVKLLK
                     DVSCSWLSLKLALVQIVAKGRAGECTYQEMLQQLNDLDAPGCVRFSDFSIRSLAYICK
                     QIVDFSGHLDLFIKEANKKFDLVMGLAKVSSVTLAGVFCILAAYVGNEKLLRKMKDAT
                     SYSMLLHLIKENRSVGQRRNHETGWYRRELRIWDFIDNAVLVRELKMKMARLTSFTNE
                     GEEEMMTVIDKLHNKTGTLAKTIDDMSKHADKYSHDIGQVGVTLNQFIPGSKLQVALF
                     GVHSVLVEDIVHLQQFNYIKDKLAQGNYGNSMCEAMGILYRAVSSLPTDLQWYIRACE
                     SAADSTLLSCHSTIIHDNTCSIIKFISVGRARSVDQIHKIVKRVIGNNLEAFMVLSEC
                     KEEWGRRSTPLFTMVSDYYHLCRETCQLYNDLVRLLKDVCDGWISVKLVLEQFVVKSR
                     DDNYTLKHILLQFNGINIDPYGVMRQLSARIKEAAKGVCFSGNIFKSFADVCTHTVAF
                     ARLFNEEIQEFKSAKILAHVSSGLVAGVFSIMSALMVGYFVGEGRQDLESIWVHLIQG
                     FSLRVSLRHFNQSLVIEEINAIHSLLHGLKLNPADFASFTEERKVAVIGHIISLMTKI
                     DKMTVSIENMSRHAHKYNHDIMEAGTSLGISQSQISLPLKRKYSC"
     misc_feature    551..>3079
                     /gene="LOC139839415"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
     misc_feature    2261..2332
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2333..2395
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2396..2464
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2465..2536
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2609..2680
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2681..2749
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2750..2818
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2819..2884
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2885..2971
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2972..3040
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3041..3106
                     /gene="LOC139839415"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3854..4720
                     /gene="LOC139839415"
                     /note="Protein of unknown function (DUF677); Region:
                     DUF677; cl21731"
                     /db_xref="CDD:451372"
ORIGIN      
        1 tatacgttct tctttcatat ttccatttgt tagtgacaca attttatgtt tttatattca
       61 agtattttgc tgctttctac gcctgggtgc tttcttcaac gtacggagta taattttgtt
      121 cagattcaag gtaaatcgga attgtcttcc gatgtagcag gtgtgcaatt gttgaacgtt
      181 gattttttca agtgcatgaa aggtgtttga tgaaatgttt gtgaaaagag agttacatga
      241 tgtgcagctt tttgaaatgc ttttttgttg aatgatattt gctcgaaagt gttgacaaag
      301 agacaaccga aagagttgtc tagccgttat tatagttaaa acgttttctt tttcaccaac
      361 ggattctgca gatgagttat tcagtgggca aagtgtgaca gtgtgtatct tattaatgtc
      421 aaatacggtg gagttaagaa cttgtgatcg tacacagtca cagtgagctg tagagatgat
      481 ctcatatgca tcatcatcat catcatcatc atcatcatca acatcatctt caattagagt
      541 ttcaaaaggc tatgatatat tcgtgagctt ccgaggggag gacactcgta ctggtttcac
      601 gagccatctg tatgaagctt taacccgaaa acgcatcaga acctacgaag atgacaagtc
      661 acttgaaact gggagtttta ttgctactga gctcctacgg gctatagaag tatcaaaatt
      721 tgccatagtg gttttatcgc gcaattttgc aacatcaaaa tggtgtttgg gggaaattgt
      781 taagattgtc gattgtatgg agttagggaa gctggttgtt attcctgttt tttaccatgt
      841 gtctccctcg gatgtacgcc atcaaagagg ctgttacgta caaggcttca ccaatcatga
      901 agaaaatccc gaaattccac ttcagatggt ggaaacgtgg agagcagctt tcaaaaagtt
      961 gggggctata tcaggattgc acgtgacaca agataggaaa gaatcagaag ttgtaaatga
     1021 aattgtaaaa agagttctta cgggcttgca agttacatta ccgacgtctc ttcccgatgg
     1081 tctggttgga atcgaatcac gattaaatga gatgaagaga attctaaata tggaatcttc
     1141 tgaagttcgt tttataggga tttgtgggat gagtggagtt gggaagacta ctcttgctga
     1201 agttgtctac caggcaatac aaaaggaatt tcaagaaagt agctttattg aaaacatcaa
     1261 agacatttcc aaggaacatg atagagattt atgtaagttt cagcagaaaa tccttgatga
     1321 cattttgaaa ggtgaaagta tacctgtacg aagtgttatt gatggacaaa ctttgttgaa
     1381 gaccaagcta cgtgatttga aggttataat tgttttggat gatgtaaatc atgcagaaca
     1441 gttaacgtat ttggctggtg gacgtgaatg gtttggaaat ggcagcagaa tcataataac
     1501 cacaacaaac acggacttgc tgaatccacc taaaatagat gcaacgtatg tatgtgaaga
     1561 attggaaggt gatgaagctc ttagtctctt ttgtcagtca gcatttggag gacattctac
     1621 aaatggttat gagaacttgt cgaaagatat tgtaaagctt gctggtggtc ttccattagc
     1681 tcttaacgtt tacggttctc tattatgtgg aaaagaagaa agatattgga aagagatatt
     1741 gaagaaattt caagaaaatc cacataaaaa ggtggttgag agacttgaaa taggttatgc
     1801 taggctagat aaaaatgagc aggatacgtt cagatatatt gcatgttttt tgaaagggag
     1861 agacaaagat ttggtaaaag atatactaac agatattggt ttgtaccctg agtgtggaat
     1921 cactgatctc atcaacaagt ttcttataac ttttgattat gaggatcgcg tgtggatgca
     1981 tgatcttcta caacaaatga gctgggaaat acttcgtaag gactcagaga gagacaatgg
     2041 gaagtacatt gcaattaagc gtcgccaaga tattcaatat atcttctcat ccaaaccaga
     2101 gaggatgaga acacttgaaa tcatcaatca agagccatat aaggttcaag aggaagtttg
     2161 ctttgatgat cctacatgtt tttcaatgat gatgaaactc agatttctca ggattagtaa
     2221 tataggattc tctcaaggtc ttgactatct ttccaatgat ctacggattc tggaatggta
     2281 tggatgttct ttgaagtcct tacctccaac ttttgcacct aatcacatat ttgaacttga
     2341 tatgtgctgt agccaacttg aaacactttg ggataaagat ctggatctgc ctaatttgag
     2401 atccattaac ctcagtttct ctacgaattt gatcaacatt ccaaacttga catcaactcc
     2461 gaaactactg atattaaatc ttgaaggttg cacaaaactg aaagagctac atgaatcggt
     2521 tctttttcat aaaaggctac gatacatgaa tcttaatggg tgtgggcttc ttcaaagcct
     2581 tggtggctgc aatatggaaa tggacgctct tgaggcgcta catttatctg gctgctctaa
     2641 tctcgagtat attcctgaat ttggactgaa catgaaacac ttggagcatc tgtatgtgga
     2701 tggaaccaaa atcaagaaat tgccagaaag cttggggaaa atgtgtaatt tgaggaaact
     2761 tgatgtgagt gaaacatcaa tagaagagat atcatcttcc atgtatcagc taaagaggtt
     2821 aagataccta cgtgttcatg gatgcacgcg tttatcccca agcagaggtt ttctatatac
     2881 aaatctggat acaatatcgt ttatacgaga gcttgatcta agttattgta atctatcggc
     2941 agttcctgat ggtattggtt tgttatgtcg cgtagtaaag ttggatcttt ccggaaataa
     3001 ttttgtttta ctcccagcaa gtatcagtct cctttcaaat cttagaatgc tttatctgaa
     3061 taattgcaag aggcttcaat cattaccgaa gctttccata gtaaacgagg agacgcacta
     3121 tggtcttcag atcagattca attactatat ttcaagagga gggacagttt tgtctaggtt
     3181 tcgtgccccg aacaactatg gttgtccaac ggtgtcatgt ttgaactgcc ctagactggc
     3241 agagaacgaa aatggtagtt atctggtgga caaaatattg aatagttacc ttcagttacg
     3301 aacaaaacac tggataacac cagcagctgt atttgagata gttggcgcag gaagcaacat
     3361 tccatcaagc ttcaagctaa tgacattcgg taaaaatgtg atccatgaag ggccatggat
     3421 tggggtggtt atatgtgctg ttattgctgt caaccaaatt gatgctttta tggacgtcaa
     3481 atacacggta acagctcata ttcatgttgg ggaaaaacat tcgatgattc caattcccat
     3541 aaactttttg atggcaaatg tggagaacca gttgatattc tactggacag attctgatga
     3601 cttactaaga actgtagatt cacaccaaaa gaactttagt ttctcattta gcgtggatcc
     3661 aggagatggt aatgtggagg ttactaagtt tggagttcgt tttatacgtg agggagacat
     3721 atttgaactg aaacgacttg aagattctac tagtaaggtg gtacactatc tgtttgaatc
     3781 ttgttttaag gagggtcgtg tgcaacggaa taactgggga aaagttatca gtttacctga
     3841 taggcattcg gccatcaacg accttaccat caggacgact aatatttttc tcaactatag
     3901 aaaacgtcga tattctttga atgatatcca taaaatcttt aattctctga atgaaatcgc
     3961 ccaagaagtt ttatgtgaat gcaaagaaga gtggagacac tcagaggtaa tcactttggt
     4021 tcatgactat tatcgaatca gtcttgaaac ctctcaactt tacaaatatt ttgtgaagtt
     4081 acttaaagac gtatcgtgta gctggttgag tctaaagtta gcattggtgc aaattgtggc
     4141 aaaaggtaga gcaggcgagt gcacgtatca agagatgcta caacagctta atgatcttga
     4201 tgcccctgga tgtgtcagat tttctgattt ttctatcagg tcgttggctt atatctgtaa
     4261 gcaaatagtt gatttttcag gacatctaga tttatttatt aaggaagcca ataaaaagtt
     4321 tgatttagtc atgggattgg caaaagtatc aagtgtaaca cttgcaggag ttttctgtat
     4381 tctggctgca tatgtgggta atgaaaaact attgcgaaag atgaaagatg caacttcata
     4441 ctcgatgttg ttgcatttaa tcaaagaaaa tagaagtgtt ggtcaaagaa gaaaccatga
     4501 gacaggatgg tatagaaggg aattaaggat ctgggatttc attgataatg cagttcttgt
     4561 acgtgagttg aagatgaaga tggctcgact tacttctttt acaaatgagg gtgaagagga
     4621 gatgatgact gtgatagata agcttcataa caagactggt accttggcaa agactatcga
     4681 tgatatgagt aaacatgctg ataaatacag tcatgatata gggcaggtag gggtaacttt
     4741 gaatcaattt attccaggca gtaagttaca ggtggctctg tttggtgttc attctgtact
     4801 tgttgaagac atagtgcacc tgcaacagtt taattatatc aaagataagt tggcacaggg
     4861 aaattatgga aattctatgt gtgaggcgat gggtattttg tatcgtgctg tttcatctct
     4921 tcccactgat ctgcagtggt atatacgtgc ttgtgaatct gctgccgatt caaccctcct
     4981 ctcctgtcat tcaaccatca tccatgacaa cacctgcagt ataattaaat tcatatctgt
     5041 aggacgggca agatccgtgg atcagatcca taaaatcgtc aaacgtgtaa ttggaaacaa
     5101 ccttgaagct ttcatggtct taagtgaatg caaggaggaa tgggggaggc gtagtacacc
     5161 attatttact atggtcagtg actattatca tctctgtcgt gaaacctgcc aactttacaa
     5221 tgatcttgta aggttgctga aagatgtatg tgacggatgg attagtgtaa agttggtatt
     5281 ggagcaattt gtggtgaaga gcagagacga caattacaca ttaaaacaca tactactgca
     5341 gttcaatggt attaatatcg atccttatgg agtgatgcga cagctgagtg cacgtattaa
     5401 agaagctgct aaaggagttt gcttttctgg taacattttc aaatcatttg cagatgtatg
     5461 tacacataca gttgcttttg caagattgtt caatgaagaa attcaagaat tcaagtcggc
     5521 gaagatatta gcacatgttt caagtggact ggttgcaggt gtttttagca taatgtctgc
     5581 tttgatggtt ggttactttg taggggaagg aagacaagac ttagagtcta tttgggtaca
     5641 tttaatccaa ggtttttcat tgagggtttc tttacgccat tttaatcaaa gtttggtgat
     5701 tgaagagatt aatgcaattc actctcttct acatggattg aagttgaacc cggctgattt
     5761 tgcttctttc accgaagagc gtaaggtggc tgttatcggt catataatat cactcatgac
     5821 gaagatagat aaaatgacgg tgagtattga aaacatgagt aggcatgctc ataaatataa
     5881 tcatgatata atggaggcag gaacaagttt gggaataagc cagagccaaa ttagtctgcc
     5941 tctgaaacgg aaatactcgt gctagacaac atcaaaattg tttacagtca attgtgtgtg
     6001 ctactttaat ttttcggtac tatacgtcta tactagtcct aaaacttgtg tatacacaga
     6061 cacaatgtat tttatatatt tgtttggcat aaattttttt tatagaatct ttgtataaat
     6121 cagaaagttt tatatgaata ttgtattgtt t
//
LOCUS       XM_071829476             875 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein DEEPER ROOTING
            1-like (LOC139839416), mRNA.
ACCESSION   XM_071829476
VERSION     XM_071829476.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..875
                     /gene="LOC139839416"
                     /note="protein DEEPER ROOTING 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139839416"
     CDS             1..768
                     /gene="LOC139839416"
                     /codon_start=1
                     /product="protein DEEPER ROOTING 1-like"
                     /protein_id="XP_071685577.1"
                     /db_xref="GeneID:139839416"
                     /translation="MKFFNWMQNKFNGGQRHTNLNAACSAHHAKQEPRKEEFSDWPHG
                     LLTIGTFGNNEVPIKQEEEIQETQCTKTSSPDLSEFTPDEIENLQKELTQLLSKKQEI
                     PADLPLDRFLNCPSTLEVDRRLSVTVSTQVNEKDEDIDRTIRVILGRCKDICTDKKAV
                     GKKSISFLLKKMFVCNKGFPTIPNSFRDPLPETRMERLLRAMLKNKINPQHSQSSSAR
                     KFIEGRRPNKKGEVTEEENKVVTKWVKTDSEYIVLEI"
ORIGIN      
        1 atgaagtttt ttaattggat gcaaaacaaa ttcaatggtg gacaaagaca tacaaacttg
       61 aatgctgctt gctctgctca tcacgcgaag caagaacccc ggaaggaaga gtttagtgat
      121 tggcctcacg ggttactgac aataggaaca tttggcaaca acgaggtacc aattaaacaa
      181 gaagaagaaa ttcaagaaac tcaatgcaca aaaacatcgt caccagatct ttctgaattc
      241 acacctgacg aaattgaaaa tctacagaaa gagttaacac agctcctgtc caagaaacaa
      301 gagatccctg ctgatcttcc attggataga ttcctaaatt gcccatcaac cttggaggtt
      361 gaccgtagac tttctgtcac tgtcagtacc caagtcaatg aaaaagatga agatatcgat
      421 cgcacaatta gagttatcct tggcaggtgc aaagacattt gcacggataa gaaagcagtt
      481 gggaaaaaat cgatttcttt tcttctaaag aagatgttcg tatgcaacaa agggtttcca
      541 acaattccta acagctttcg tgatccactt cctgaaacaa gaatggagag gctattaagg
      601 gctatgctta agaacaagat caaccctcaa cattctcagt cgtcatcagc aaggaaattc
      661 atagagggta gacgaccaaa taagaaaggg gaagtgacag aggaggagaa taaagttgtg
      721 acgaagtggg tcaaaactga ttctgaatat atcgttctag agatatgaag cgaagcacac
      781 attactaaaa ccatgtaaag atctcgcaat gcccacgatg attaaagttg tatcttttct
      841 tgctgatatg tttgaggttt tatttaaggt aaaac
//
LOCUS       XM_071829477            1887 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839417), mRNA.
ACCESSION   XM_071829477
VERSION     XM_071829477.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1887
                     /gene="LOC139839417"
                     /note="uncharacterized LOC139839417; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839417"
     CDS             1..1887
                     /gene="LOC139839417"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685578.1"
                     /db_xref="GeneID:139839417"
                     /translation="MAVDEFSRSVDMGLRLSKRIYYGKDANPCMNAPKPPSMEKSLST
                     SSSASSFRLPQNHHPTAPMVYAVINEPAVVDNPDIRSYQPYVYGRCDPPALIPLHMLG
                     AMLEVDCYLDTAFVTFNGTWRVHCLASTAFCDCRITIPMGEQLQVLVYSERVRFGKQG
                     LVLGVEVETKRRSYFSQLIYPEDEKDNLQETTKDGFLMKGNTYTFQILQVEGGSSINV
                     KVKWSQKLLFQGNDFCLNVPFTFPVHVFPVFKKSPCREKIVLNVDSGTCTAIMCNIAS
                     HPIKELKKQSGQLCFMYEAEAVSLDPFDQRFGIGLAAFCKVCSSEIFGGLLLQSPSLH
                     DYDQREIFLFYLFPGSNRSIKPFKKEVVFVVDTSSCMQDGPIQKVKYEIIGSLWKLNQ
                     EDSFNIVASNGQVKSFSTSLVMATKETITNATEWMNTNLIADGATNLLLPLEQAIDMV
                     GKTSDSKIPLIFLITDGAVEDEPEICNMMKAHLVNCELNSPRIFTFGIGSYCNHYFLQ
                     MLANIGRGYYDSAFDVDPISIRLQKLLDDATTPVLSNVTLDDLQYLESHEIFPYRFPD
                     LSSGRPLIVSGRFKGNFPDIVKATGFLALDKTSHVIDIKVRKANDVPLEMAKMVHVGF
                     DFKH"
     misc_feature    1069..1599
                     /gene="LOC139839417"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cl00057"
                     /db_xref="CDD:469594"
     misc_feature    order(1096..1098,1303..1305,1396..1398)
                     /gene="LOC139839417"
                     /note="metal ion-dependent adhesion site (MIDAS); other
                     site"
                     /db_xref="CDD:238119"
ORIGIN      
        1 atggcagttg atgagttttc aagatcagtt gatatgggac tgaggctttc taagcgtatt
       61 tactatggta aagatgctaa cccttgtatg aatgctccaa aaccgccttc aatggagaaa
      121 tcattatcca cttcttcatc ggcttcgtca tttcgtttgc ctcaaaatca tcatcctaca
      181 gcaccaatgg tttacgctgt tataaacgag cctgctgttg tggataatcc tgacattaga
      241 agctaccagc cttatgtgta cggacgttgt gatccaccgg ctttaattcc tttgcatatg
      301 ttaggagcta tgttggaagt ggattgttat ttggataccg cgtttgttac ctttaatggt
      361 acttggcgtg ttcattgttt agcatccact gcattttgtg attgtcgtat caccattccg
      421 atgggcgagc agcttcaagt tttagtatat tctgaaagag taagatttgg taaacagggt
      481 ttagttctgg gtgtggaggt tgagaccaaa agaagatcat atttcagcca attaatatat
      541 cctgaagatg aaaaagacaa cctacaagaa accacaaagg atggattctt gatgaaaggc
      601 aatacataca cttttcagat cttacaggtt gaaggaggaa gcagcataaa tgttaaagtt
      661 aaatggtctc agaagctgtt atttcaaggc aatgatttct gtctcaacgt gcccttcact
      721 tttccggttc atgtgtttcc tgtatttaag aaatctccgt gtagagaaaa aatagtgcta
      781 aatgtggatt ctggtacctg cactgcgatt atgtgcaata ttgctagcca tcctataaag
      841 gaactaaaaa aacaaagtgg gcaactatgc tttatgtatg aggccgaggc tgtcagctta
      901 gatccttttg accaaagatt tggtattggg ttggctgcat tttgtaaggt atgctcaagt
      961 gagatattcg gtggtttgct cctacagtct ccatctttac atgattacga tcaaagggaa
     1021 atatttttgt tttatctttt ccctggaagt aaccgaagca tcaagccttt caaaaaggaa
     1081 gtggtgtttg ttgtcgatac aagtagttgc atgcaagatg ggcctattca gaaagtaaaa
     1141 tatgaaatca taggatctct atggaagctt aatcaagaag attcttttaa tattgtagct
     1201 tcaaatggac aagttaaatc attctctact tcattggtga tggcaacaaa agaaaccatc
     1261 acaaatgcaa ctgaatggat gaatacaaat ctcattgcag atggtgctac taacctgctg
     1321 cttcccctag aacaggcaat tgatatggtt ggtaaaacca gtgactcgaa gattcctctt
     1381 atatttctaa tcactgatgg ggctgtcgaa gatgaaccgg aaatttgcaa tatgatgaaa
     1441 gctcaccttg taaattgtga actgaactct ccacgaattt tcacatttgg cataggttca
     1501 tactgcaatc attacttctt gcaaatgctt gctaatatcg gaaggggata ctacgattct
     1561 gcatttgatg tagatccaat cagcattcga ctgcaaaaac tgcttgacga tgctacaaca
     1621 cctgtacttt caaatgtaac ccttgacgat ttacaatatc tagagtcaca cgagatattc
     1681 ccataccgtt ttccggactt atcatctgga aggccgttaa ttgtatcagg gagattcaaa
     1741 gggaacttcc ctgacattgt taaagccaca ggtttcttgg cattggataa aactagtcat
     1801 gttattgaca ttaaagtgag gaaggcgaac gacgttcctt tagaaatggc caaaatggtc
     1861 catgttgggt ttgacttcaa acattaa
//
LOCUS       XM_071829479            5301 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839418), mRNA.
ACCESSION   XM_071829479
VERSION     XM_071829479.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5301
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5301
                     /gene="LOC139839418"
                     /note="uncharacterized LOC139839418; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839418"
     CDS             1..5301
                     /gene="LOC139839418"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685580.1"
                     /db_xref="GeneID:139839418"
                     /translation="MGKSSAGKNPKKSQQTTSKVLRNRTVGVDEKVVESESTDSSDCD
                     AATSKKNDGSKGNDGSLIGLRDDPVPLEDSSNPKEERDMPANHDSSKDNTVAEENIDE
                     DIVSVHSEDSWDEKYGRDASHDCAASPVKAVHGSNIKVPATQEQTQEQPKEQAKKVLY
                     SDIVSDAKVPRKVNFRFIEPISNLDDGVDVAIPLSSVREATERYSHTLYGYFLGKRVA
                     FPVVHNYVMNVWRKYGIEKIMMNSKGFFFFKFSSKQGMMDVMENGPWIIRTIPIILNQ
                     WTPSVSLTKEDLTRVPVWVKLHDVPLSGFTEDGLSCIASSIGQPLMLDSYTSTMCMES
                     WGRPNYARALIEIQANKEMKETLVVATPSLMEDGITKGTTKDVVKVEYEWKPPRCPYC
                     EVFGHTKAGCPKAIPVKEPQKQDEDGFVQVNKRYNKGVIIGKKRSNGSVMGFNKPKLV
                     YRPVRKESNSQKEGEKQKASTSGTKKVVNNMFGALNDLDPNEEYDLNIPHVKAKRNGQ
                     VVGTLVDEESDVEEETNANKKRSEGASTPVAESRAASHKLQSICNNVCNTWDWTSNAN
                     KCSGGTRIILGWNPLLVQLMVLAMTDQVIHCQIRMVHNGSHVFASFVYADNYYVQRRK
                     LWRDLQMHHGFVNDNPWVILGDFNASVSIDESTASGSCMTLAMREFKECLDNIQVDDV
                     NNMGMQFTWNQKPNATTGILKKIDRVLVNDGFLSIYPNAYAIFQPYRKSDHSPSILKI
                     PSLLPVKPKMFRFSNYVADQEGFKQCVVDGWGVIVEGHAMFQVVKRLRYMKKTIRKLM
                     WTKGNIHATVCRLREELDKLQIELDRDPFSLPIREAEANKLKEFNDALWDEERFLKQK
                     AKVQWLKVGDSNSKYFHKVIKCKANRSRINAITNNDGVVVEGAAVAEVFVQHYMEFLG
                     ASQPCDQIVNSQSIFVNKLSSEQALHMIRQVTDEEVKAAMFDIGDDKAPGPDGYSSVF
                     FKKSWDIVGHDICKAVKDFFKNGHLLTEINHTILALLPKVETPRLVNDYRPISCCNVL
                     YKCISKIITTRIKGCLDCIVSDNQAAFVPGRRITDNILITQEIVKNYHLNRGVPRCAF
                     KVDIQKAYDTVDWGFLKHILHCYGFHKTMIKWIMKCVSTTSFSISINGEIHGFFKGRR
                     GLRQGDPMSPYLFTLVMECLTLMIKRNIREADSFKYHPMCDQQEIVNVCFADDLFLLA
                     HASTGSVKVISEALDEFKRCSGLVPSLPKSTAYFANVTSGVKNDVLDLMPFIEGSLPV
                     RYLGVPLISSRLYYNDCKSLVDRVRAKISDWKNKYLSFAGRVQLISSVLSSMQGYWSS
                     VFMLPDAIIKDIEKLMRGFLWCQGEMKKGKAKVRWKDVCLPKKEGGLGLKNLKVWNIA
                     LISYHVWCVITHKQSLWVRWIHSYRLSNQSFWEVDVPTTASYGWKKILGLREVIRPFI
                     IHKIGRGDCTYAWHDIWSDFGHLSGLFSYREIHQAGFQRLSTVADLWVSNGWNWPTSW
                     TSRFPMLMNIRPPDMNKEDSVFWRDNHGDLIQFSSQVAWESLRPKAPLVSWFSLIWFP
                     QGVPRQAFIMWLLVKEKLKTQDKLKAWDVGSSRHLNDSCALCKTQQDSHDHLFFECPF
                     SMQVWSRVQQNIPLQILSYKWREIMDLLSEVADRQVARVVVSKLLLSASVYFLWQERN
                     ARLFKSETRSPDQIFKIIFSSTRLKLMSLKFKDSLHVRDDVSLMEMAVLVKVVDTGTD
                     RVVAACYGGCSCGFVQKWVMIKWEKVYQGGGSSDVVLGVV"
     misc_feature    589..1035
                     /gene="LOC139839418"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
     misc_feature    <1840..2205
                     /gene="LOC139839418"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    3007..3807
                     /gene="LOC139839418"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(3271..3288,3448..3453,3586..3588,3592..3597,
                     3793..3798)
                     /gene="LOC139839418"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(3271..3288,3448..3450,3592..3594)
                     /gene="LOC139839418"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    3451..3453
                     /gene="LOC139839418"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    4579..4842
                     /gene="LOC139839418"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggaaaga gttctgctgg aaagaatcct aagaaatcac aacaaaccac atctaaggtt
       61 ttgaggaatc gtaccgtggg cgttgatgag aaagtagtag agagtgaatc gactgactct
      121 agcgattgtg atgcagcaac gtcgaagaag aatgacggat ctaaggggaa cgatggaagt
      181 ctgatcggat taagggacga tccagtacct cttgaggata gctctaatcc taaggaggaa
      241 agggatatgc ctgcgaatca tgattcttcc aaagataata ctgttgctga ggaaaatatt
      301 gatgaggaca tagttagtgt tcactctgag gattcatggg atgagaagta tggcagggat
      361 gcgagtcatg actgtgctgc gtctcctgtc aaggcggtac atgggagtaa cataaaggta
      421 cctgctacac aggaacaaac acaagaacaa ccaaaggaac aagcaaagaa ggtattgtat
      481 agtgatattg tttctgatgc taaggtccct agaaaagtta attttcgatt tattgaacct
      541 attagcaact tagatgatgg agttgatgtt gctattccgt tatcttctgt tcgggaagcg
      601 acagaaaggt atagccatac tttatatggt tatttcttgg gaaaaagggt tgcattcccg
      661 gttgttcaca actatgtcat gaacgtttgg aggaagtatg gaattgagaa aataatgatg
      721 aattcgaaag gttttttctt tttcaagttt tctagtaaac aaggaatgat ggatgttatg
      781 gagaatggtc catggattat tcggacaatt ccaattattt tgaaccaatg gacaccttcg
      841 gtatcgctta caaaggagga tcttacaaga gtcccggtgt gggtaaagtt gcatgatgtg
      901 cctttatcgg ggttcacgga agatgggttg agttgcatag cgtctagtat tggtcaacca
      961 ttaatgttgg attcatatac gagtaccatg tgtatggaat cttgggggcg acctaactat
     1021 gcgagggcgt taattgagat ccaagctaac aaggagatga aagaaactct tgtagttgcg
     1081 actcctagtc taatggagga tggtataacg aaagggacta cgaaggatgt agttaaggtt
     1141 gagtatgaat ggaagccacc gagatgtcca tattgtgagg tatttggtca tactaaagca
     1201 ggctgcccta aagctattcc tgttaaagaa ccgcaaaaac aagatgagga tggtttcgtg
     1261 caggtgaata aacgttacaa taagggagtg attatcggca agaagagaag taatggtagt
     1321 gtaatgggtt ttaataaacc caagctggta tatcgtcctg ttcgtaaaga aagtaatagt
     1381 cagaaggaag gagagaagca gaaggcaagc acaagtggta ctaaaaaagt agtcaataat
     1441 atgtttggtg ctctaaatga tttggaccca aatgaggaat atgacctgaa tataccccat
     1501 gtaaaagcga aacgtaatgg ccaggttgtg ggaactctag tcgatgagga gagtgatgta
     1561 gaagaggaaa caaacgccaa taagaagcga tctgagggtg caagcacacc cgttgcggag
     1621 tcccgtgcag catcgcataa actgcagtcg atatgtaata atgtttgtaa tacgtgggat
     1681 tggacgtcga atgctaacaa atgttctggt ggcactcgca ttattttagg gtggaatccg
     1741 ttgttagttc agcttatggt tttggctatg acggatcagg ttattcattg ccagatccgt
     1801 atggttcata atgggagtca cgtgtttgct tcgtttgttt atgcggataa ttattacgtg
     1861 caaaggcgaa agttatggcg ggatcttcag atgcatcatg ggtttgttaa tgataatcct
     1921 tgggttattc ttggagactt taatgcttca gttagtattg atgaatcaac tgcgagtggc
     1981 tcgtgtatga ctctagctat gcgtgagttc aaagaatgct tagataacat tcaagttgat
     2041 gatgtgaata acatgggcat gcaatttacg tggaatcaaa aacctaatgc tacaacgggt
     2101 attttgaaga aaattgaccg tgttttagtc aacgatgggt ttctttctat ttaccctaat
     2161 gcttatgcta tatttcagcc atatagaaaa tcggatcata gtccttcaat attgaaaatt
     2221 ccttccttgt tgcctgttaa accaaaaatg tttcgattta gcaattatgt agcggatcag
     2281 gagggattta aacaatgtgt tgtggatggt tggggtgtta ttgtggaggg ccacgcaatg
     2341 tttcaagtgg ttaagcgttt gagatacatg aaaaaaacca ttagaaaact tatgtggacg
     2401 aaagggaata ttcatgcaac cgtttgcagg cttcgagagg agttagacaa attacaaatc
     2461 gagttggatc gtgacccttt ttcgttacct attcgagaag cagaagcaaa taagctgaaa
     2521 gaatttaatg atgctttatg ggacgaggaa cgttttttaa aacaaaaagc taaggtgcaa
     2581 tggttaaagg ttggtgacag caactctaaa tattttcaca aagtgattaa atgtaaagcc
     2641 aacagaagcc gaataaatgc tattacgaat aatgatgggg ttgtagttga gggagctgct
     2701 gttgctgaag tttttgttca gcactatatg gagtttctag gtgcttcgca accctgtgat
     2761 cagattgtaa attcacagtc catttttgtg aataaacttt cgagtgagca agcgcttcat
     2821 atgattcgtc aagttacaga tgaggaagtg aaagctgcta tgtttgatat aggagatgac
     2881 aaagctcctg gtccggatgg gtatagttct gtatttttca aaaaatcatg ggatattgtg
     2941 ggtcacgata tatgcaaagc ggttaaagac ttctttaaga atggtcactt acttactgaa
     3001 ataaatcata ccattttagc tttgcttcca aaggttgaaa ctccaagatt ggttaatgat
     3061 taccgcccaa tctcatgctg taatgtgctt tataagtgta tcagtaagat cattacaaca
     3121 aggataaagg ggtgtttgga ttgtattgtg agcgacaacc aagcagcttt tgtcccgggt
     3181 cgtcgtatca ctgataatat tttaattact caggagattg tgaaaaatta tcaccttaat
     3241 agaggagtgc cccggtgcgc cttcaaggtg gatatccaga aagcgtatga tacggtggac
     3301 tggggatttc tgaaacatat tctacattgt tatggttttc ataagaccat gataaaatgg
     3361 ataatgaaat gtgtgtccac tacttcgttt tctattagta ttaatgggga gatccatgga
     3421 ttcttcaaag ggaggagagg gttgcggcag ggagacccaa tgtcccctta tttgtttaca
     3481 ttggtgatgg aatgtctgac tctgatgata aagagaaata ttcgtgaagc cgattctttc
     3541 aaataccacc ctatgtgtga tcaacaggag attgtgaatg tgtgctttgc tgatgattta
     3601 tttttattgg ctcatgctag tacaggttcg gtgaaggtta tctcagaagc cttggatgaa
     3661 tttaaaagat gctctggttt ggttccgagt cttcccaaga gtacagccta ctttgctaat
     3721 gttacttcag gggtaaagaa tgatgtgctt gatttgatgc catttattga aggttctctt
     3781 ccggtcagat acctaggtgt gccgttgatc tcttctcggt tatattataa tgattgtaaa
     3841 tccttggtcg atcgggtaag agctaagatt agtgactgga agaataaata cttatctttc
     3901 gccggaagag ttcagttgat ttcgtcggtg ttgtcctcca tgcaaggtta ctggtcctct
     3961 gtttttatgt taccggatgc cattataaag gatatcgaaa agcttatgcg tggttttttg
     4021 tggtgtcaag gagagatgaa aaagggtaag gctaaggtta gatggaaaga tgtttgtctc
     4081 ccaaagaagg aaggaggttt gggtctaaaa aatttgaaag tttggaatat tgcgcttatt
     4141 tcgtatcatg tgtggtgtgt aatcacacat aaacaatctt tgtgggttcg ttggatccac
     4201 tcatataggc tttcaaacca gagtttttgg gaggtcgatg ttccaacaac agctagttac
     4261 gggtggaaga aaattttggg tctgagagag gtgatccgtc cttttatcat tcataagatt
     4321 ggtagagggg attgtactta tgcttggcat gatatttgga gtgactttgg tcacctaagt
     4381 gggttgtttt cttatagaga aattcatcaa gcaggtttcc agaggttgtc tactgttgcg
     4441 gatttgtggg tgtcaaatgg ttggaattgg ccaacttctt ggaccagtcg tttcccgatg
     4501 ctaatgaata tccgtccgcc tgatatgaat aaagaggatt ctgtgttttg gagagacaat
     4561 catggagatt tgattcagtt ttcttctcag gtggcatggg aatctttacg ccccaaagcc
     4621 ccgttggttt catggttttc tcttatttgg tttccccaag gagttcctcg tcaggctttc
     4681 atcatgtggc ttcttgttaa agaaaagttg aagactcagg ataagctaaa agcttgggat
     4741 gttgggtcgt cgaggcattt gaatgattca tgtgcattat gcaaaactca gcaggattcc
     4801 catgatcatt tattcttcga atgcccgttt tctatgcagg tctggagccg agttcaacaa
     4861 aatattccat tgcagatttt gagctataag tggcgtgaaa ttatggatct gttaagcgaa
     4921 gtggctgata gacaagtggc tcgagtggtt gtttcgaaac tcctgttgtc cgcttcagtt
     4981 tatttcttat ggcaggaaag gaatgcaagg ttgttcaagt cagaaacaag gagtccagat
     5041 cagattttca agattatatt ctcgtctacg aggctcaagt taatgtcctt aaagtttaag
     5101 gactcgctcc atgtccgtga tgatgttagc ttgatggaga tggctgtttt ggtgaaggtt
     5161 gtagatacag gtacagatcg tgtagtagca gcatgttatg gtggctgttc gtgtggtttt
     5221 gttcagaaat gggtgatgat caaatgggag aaggtttatc aaggtggtgg ttcaagtgat
     5281 gtagttcttg gtgtcgtgta g
//
LOCUS       XM_071829480            2446 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides wall-associated receptor
            kinase 2-like (LOC139839419), mRNA.
ACCESSION   XM_071829480
VERSION     XM_071829480.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2446
                     /gene="LOC139839419"
                     /note="wall-associated receptor kinase 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139839419"
     CDS             107..2347
                     /gene="LOC139839419"
                     /codon_start=1
                     /product="wall-associated receptor kinase 2-like"
                     /protein_id="XP_071685581.1"
                     /db_xref="GeneID:139839419"
                     /translation="MNLQILLATIITTAALWTSSGQNGPNCETSCGNVTITYPFGSGE
                     GCYYSPDFLVTCNRSSGVPIPYFGDSTGNVVISNMSINQSEIEIMMFVASDCYNTSGQ
                     ESRSRPSLALWDFRISTKNKFVAIGCDTQAVFSASRDSRANATDATGCISICGQNSLI
                     TNGSCSGVGCCEAEVPEGTKSFQISISSFNNHANMTDFNPCSYGFFVEEGKFSFYANY
                     LRDFRSVDKMPMVLDWAIGNLTCDEASRNSDNFLCKGNSECDRDYEGPGYRCSCVAGY
                     EGNPYLLNECKNIDECKRGKHDCEHECEDTEGSYTCSCRKGYSGDGRKDGTGCTKDES
                     VLIKIVIGASCAAIFLLIFVTWLYLGLKKRKLIMLREKFFKQNGGLMLQQRISGDGGS
                     QDRAKVFTIEELKKATNNYDERRIIGKGGYGTVYKGVLSDNRVVAIKKSKLADQTQNQ
                     IEQFINEVVILSQINHRNVVKLIGCCLETEVPLLVYEFVPNGTLSDHIHKNGKSSSVT
                     WDVRLRIATETASALSYLHSAASVPIIHRDVKPENILLDENYVAKVADFGASRLVPMD
                     QIELATIVQGTLGYLDPEYLQTNQLTDKSDVYSFGVVLVELLTAKKALSFDRPEEERN
                     LAMYFLSSLKNGQLFNVLDEHLQLNYVPNEMMQVSRLAERCLRVKGDERPSMKEVAME
                     LEGILASMVQKHPWVQSVLKEDEGVHLLEEVTNEYECKDEANVMNSWNPDSMNKQSIF
                     SIAKGR"
     misc_feature    1355..2164
                     /gene="LOC139839419"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1355..1369,1379..1381,1415..1417,1421..1423,
                     1514..1516,1562..1573,1583..1585,1589..1591,1718..1720,
                     1724..1726,1730..1735,1739..1741,1772..1774,1781..1783,
                     1832..1843)
                     /gene="LOC139839419"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1355..1369,1379..1381,1415..1417,1421..1423,
                     1514..1516,1562..1573,1583..1585,1718..1720,1724..1726,
                     1730..1735,1739..1741,1772..1774)
                     /gene="LOC139839419"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1367..1369,1583..1585,1589..1591,1718..1720,
                     1724..1726,1730..1732,1781..1783,1832..1843)
                     /gene="LOC139839419"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1769..1792,1823..1825,1826..1843)
                     /gene="LOC139839419"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 tcgttctcgt acaaaaatga acaagtcttc atgttgaagt tcatatataa aatcttcata
       61 atcatccctc cccaatcaaa acctcaatat cacaaacaaa acaactatga atcttcaaat
      121 actattagca accataataa caactgcagc tttgtggaca tcgagtggac aaaatggacc
      181 aaattgtgaa acttcatgtg gcaatgtaac aattacatac ccatttggtt caggtgaagg
      241 atgttactat agtcccgatt ttctcgtaac ttgtaaccga tcatccggtg taccaattcc
      301 ttactttggt gatagcacag gtaacgttgt tatttcaaat atgtcaataa accagagtga
      361 aatcgaaatt atgatgtttg tagccagtga ttgctacaat acttctggtc aagaaagtag
      421 atcccgtccc tctttagcct tatgggattt tagaatctcg accaagaaca agtttgtagc
      481 tattggttgt gacacacagg cggtatttag tgcatcgaga gactcgagag cgaatgcgac
      541 tgacgctact ggatgtattt ctatatgtgg tcaaaatagt cttatcacaa atggatcttg
      601 ttcgggagtt gggtgttgtg aagctgaagt accggaagga acgaaatctt ttcaaatatc
      661 aataagtagt tttaataacc atgcgaatat gacggatttt aatccttgta gctatggttt
      721 ttttgttgaa gaggggaagt ttagcttcta tgcgaattat ttgcgcgatt tcagaagtgt
      781 agataagatg cctatggtac ttgattgggc aatcggtaat ttgacttgtg atgaagcaag
      841 taggaacagt gataatttct tatgtaaagg aaacagcgaa tgtgatcgag attacgaagg
      901 tcccggatat cgttgtagtt gcgttgcggg ttatgaaggc aatccttatc ttctaaatga
      961 gtgcaagaat attgatgagt gcaaacgtgg taaacatgac tgtgaacatg aatgtgaaga
     1021 tacagaaggt agttatactt gttcttgtcg aaaaggttac tctggagatg gtagaaaaga
     1081 tggaacagga tgcacaaaag atgaatcagt acttataaaa attgttatag gtgcctcatg
     1141 tgctgcaata tttctactta tattcgtgac atggttgtat ttgggactaa agaagcgaaa
     1201 gcttataatg cttcgcgaaa aattctttaa gcaaaacggc ggattaatgt tgcagcaacg
     1261 aatatctggc gacgggggtt ctcaagatcg agcgaaagtc ttcacgattg aggagcttaa
     1321 gaaggcaact aataactacg atgaaagaag gattatcgga aagggtgggt atggcacagt
     1381 ttataaaggt gttctttctg ataacagagt tgttgcaatt aagaagtcga aattagcaga
     1441 tcaaacccaa aaccagatcg aacagtttat taacgaagtg gttatcttat cacaaatcaa
     1501 tcatcgaaat gtggttaaac tgattggatg ttgtttggaa actgaagttc cgctattggt
     1561 gtacgagttc gttccaaacg gtacactttc agatcacatt cataaaaatg gtaaatcgtc
     1621 gagtgtaact tgggacgtta gactcagaat agcaacagag acagcgtcag cactttcgta
     1681 tttacattct gcagcgtctg tcccgatcat tcatcgagat gtgaaacctg aaaatatact
     1741 tttggatgaa aattatgtag caaaagtggc ggattttgga gcgtctaggc tcgttcctat
     1801 ggatcagata gagttggcta ccattgtgca ggggacatta gggtatttgg atcctgaata
     1861 tttgcagacg aatcagttga cagataagag cgatgtttat agttttgggg tcgtattggt
     1921 ggagctttta acggccaaaa aagcgcttag ttttgatagg ccagaggaag agaggaacct
     1981 agctatgtat tttctatctt ctttgaaaaa tggacaactg tttaatgttc ttgatgaaca
     2041 tttgcaacta aattatgttc ctaatgagat gatgcaagtt tcgagacttg cagagagatg
     2101 tttgcgcgtt aaaggagacg aaaggccgag tatgaaagaa gtagcaatgg agttggaagg
     2161 aatattggca tcaatggtac aaaagcatcc atgggtgcaa agtgtattga aggaagatga
     2221 aggtgtgcat ttgcttgaag aagtaacaaa tgaatatgaa tgcaaagatg aggctaatgt
     2281 gatgaactca tggaatcctg atagtatgaa taagcaaagt atattttcca ttgctaaagg
     2341 taggtaaagg tagagagact tgtattgctt taaaaatgta tataaaataa aatagttaag
     2401 tttatgtgaa ggtgatcatt acactaattc agttttgtcg tcataa
//
LOCUS       XM_071829481            4491 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-insensitive protein
            2.2-like (LOC139839420), mRNA.
ACCESSION   XM_071829481
VERSION     XM_071829481.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4491
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4491
                     /gene="LOC139839420"
                     /note="ethylene-insensitive protein 2.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139839420"
     CDS             452..4153
                     /gene="LOC139839420"
                     /codon_start=1
                     /product="ethylene-insensitive protein 2.2-like"
                     /protein_id="XP_071685582.1"
                     /db_xref="GeneID:139839420"
                     /translation="MTHRLLPAVLPVVFIAITYVDPGKWVAAIEGGARFGYDLIIPML
                     VFSLAAVLCQYLSASIAVVTGQDLAQICSDEYDMITCVFLGVQAELSMIALDLSMILG
                     TAHALNLTFGLGLFPCVILTSLDAFLFPVVSSYLENGKAKFICMWLATVALSSYFLGV
                     ITSQQDTSFSMGGILTNLNGESAFALMTLLGASIMPHNFYQHSSMVQQDQGSTQVSKG
                     SLCHDHLFAIACVFSGIFLINYILMNSAANVFYSTGLDLLTFQDALSLMDQVFRSLMA
                     PFALVLVMVMSYHTTALTWKFSGQSVLLNFFKIDIPGWFHHSTIRFIALVPALLCAWN
                     SGAEGTYQLMLFTQIIVALLLPSSVVPLFRVASSKSVMGVNRISQFVEFLVWATYIGM
                     LGLVIVFMVEMVLGNSDWASNVRWTMWVPYNVVLVASVFSISLMIWLVVTPLKSAGPG
                     LDVHNRDVQDIFPESPFKEKIEDTRVNQETIITSNENSSECNFNSNSNSNSSEINLPD
                     ELLDYGSVTHLTTIDETSCDPVVSSKSDDPVPIVDSFANPVVNVSEKEDDDLVEKTLS
                     IDGNSQFMKDNNREMNQSPSFNGPGSFTGLVEKNDHIGSGPGSLSRVPILEPEEVPIM
                     VSEMNQSPSSNGPGSFKGLGEKNDDIGSGPGSLSRVAGLGRAARRQLATTLDDFWKLL
                     FDLHGEMTQDAKSNKLDKLFGIDSKVNVVKPSPVISKMVNPEFEFNSFNTSLSSGLSE
                     SVYGVQHGSTPFVSTYQQLVDTYVQNPNLNMMDPEKRYHSLRLPQPSGTYVDQPATVH
                     GYQIKSLINQTKQRNLEYFDPVSPKSPSLVSLNFRAPVSLTKTQQNGLRPAKPPGFPD
                     PVVSRNNSIQPERAFYNHQPSAPVENVHEKKYYSMPDISGLLPKRDSQVLPERDGPAR
                     YGTLGQSVYSGPLYRSGSISGYGGSNLSRDAAAYQPVSSYGPGFGSDTWSMWSKQPSE
                     QFGVAEKIKARSNVGNILEADAEANLLKSFRLCIVKLLNLEGSEWLFKQNGGLDEDLI
                     DSVAARERFLYDIEGGDANRGAHGGIKVNEAEYMKYLVTSVPNCGEGCVWRVEIIKSF
                     GVWCIHRILDLSRMESRPELWGKYTYVLNRLQGIIEPAFSKPRVPTNPCFCLQLPSAY
                     RQRSSPPKSLSSLPPPVKPNKGKCTTAAALLESVKNVETAISSKKGRPGTAAGDVAFP
                     KGKENLASVLKRYKRRLLAVSTDGLSRSP"
     misc_feature    524..1585
                     /gene="LOC139839420"
                     /note="Natural resistance-associated macrophage protein;
                     Region: Nramp; pfam01566"
                     /db_xref="CDD:426327"
     polyA_site      4491
                     /gene="LOC139839420"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tattttatta ttgtatctat cagctcttct ctctcttcca ttagccacag ctaattcgct
       61 ctttctctca cttctgcaat ctttgttaga ccgcatctga tctatgactg attgatcttc
      121 ttcagctttt aatcactacc cacaaacaaa ttatcccgaa gaattagcca aaaaggattt
      181 gatatcactc ggattggttt ggagtctatg acattttcat gtcaagctcg gatatttgta
      241 atttaaattt gacatgaagt tggttatgat cgtgaccaca acgagtgtca aaatcttgtt
      301 atgcctattg ttgtcatgtg attaaactgc ttgagcaaat atcagatgag ttttatagat
      361 taaattagcc attgactaaa attttgttcc gagaatagta ctgttagagt aatttttgac
      421 aaacgagctg gtcacaaaat cccaaccgaa tatgacacac aggctgcttc cggctgtttt
      481 gcctgtagtt tttattgcaa tcacatatgt tgatccagga aaatgggttg cagccatcga
      541 aggtggggcc cgttttggat acgatcttat catacctatg ttagttttta gtttggctgc
      601 ggttctctgt caatacctat cggcttctat cgctgtggtc accggacaag atcttgccca
      661 gatttgcagt gatgagtatg acatgatcac ttgtgtattt ttgggagttc aagcggaact
      721 ttctatgatt gcattggacc tttcaatgat attgggaacc gcgcatgcgc ttaatcttac
      781 attcggcctt ggtctcttcc cgtgcgtcat tttgacttct cttgacgctt ttctatttcc
      841 ggttgtgtct agttacttgg agaatggcaa agcaaagttc atatgcatgt ggttggcgac
      901 cgtcgcttta tcttcgtact ttttaggagt aatcacgagt caacaagata catctttctc
      961 aatgggcggg atacttacaa atttaaacgg agaaagtgcg tttgcattaa tgacgctact
     1021 cggtgctagc attatgcctc ataattttta tcaacattca tctatggtcc agcaagatca
     1081 gggatcaacg caagtttcaa agggatcttt atgccatgat catctttttg ccattgcatg
     1141 tgttttcagt ggcatctttc tcataaatta catccttatg aattcggcgg caaacgtgtt
     1201 ctacagtacg ggccttgatt tacttacttt tcaggatgcg ttgtctctaa tggatcaggt
     1261 atttagaagt ctaatggcgc ctttcgcttt agttctcgtt atggtgatgt catatcacac
     1321 aacagcgctg acgtggaaat ttagcggtca atcggtcctc cttaactttt tcaaaatcga
     1381 cattcccggt tggtttcatc actcaacaat tagattcata gctttagttc ccgccctttt
     1441 atgcgcgtgg aattcggggg ccgaaggtac gtaccaacta atgcttttta ctcagattat
     1501 agtcgccctt ttgctcccgt catcagtggt cccgcttttc cgtgttgcgt catcgaaatc
     1561 ggtgatgggt gtaaatagaa tctctcagtt cgttgagttt cttgtttggg ccacttatat
     1621 tggaatgtta ggtttggtga ttgtattcat ggttgaaatg gtacttggaa atagtgattg
     1681 ggcgagtaat gttaggtgga ccatgtgggt cccgtataat gtagttctcg tcgcttccgt
     1741 tttttccatc tcgctaatga tttggcttgt cgtaactcct ttgaaatctg cgggtcccgg
     1801 acttgatgtt cataatcggg atgttcaaga tatctttccc gaatcacctt ttaaagaaaa
     1861 gattgaagac acgagagtaa atcaagaaac tataatcaca tcgaacgaga attcatcgga
     1921 atgtaatttc aattctaatt ccaattccaa ttcaagtgaa atcaatttgc ccgatgaact
     1981 attggactat ggtagcgtga ctcatttgac taccatcgat gaaacgtctt gcgatcccgt
     2041 tgtgtcgtct aaatcggatg atccggtacc gattgtggat agtttcgcga atccggttgt
     2101 taacgtatcc gaaaaggaag atgacgattt ggtggaaaag actttgagta tagatggaaa
     2161 ctcgcaattc atgaaagata acaatcggga aatgaatcaa tctccaagct tcaacgggcc
     2221 cgggtcgttc acgggtctcg ttgagaaaaa tgatcatatc ggtagtgggc cgggtagtct
     2281 ttcgagggta ccaatattgg aaccggaaga agtaccaata atggtatcgg aaatgaatca
     2341 atctccaagc tcaaacgggc ccggctcatt taagggtctt ggtgagaaaa acgatgatat
     2401 cggtagtggg cccggtagtc tatcgagggt agcgggctta ggtcgggctg ctagacgcca
     2461 attagctacg acacttgacg atttctggaa acttttattc gatttgcatg gagaaatgac
     2521 acaagatgct aaaagtaaca aactcgacaa gttgttcggt atagattcga aagtaaacgt
     2581 tgtaaaaccc agtccggtta tatcaaaaat ggtcaaccca gaattcgagt ttaacagctt
     2641 taacacgtcc ttgtctagcg gactatccga gtcggtttac ggggtgcaac acgggtcgac
     2701 ccctttcgtg tccacttatc aacaactagt ggatacatat gtacaaaacc cgaatcttaa
     2761 catgatggat cccgagaaac ggtaccatag tttacgatta cctcaacctt cgggtacata
     2821 cgttgatcag cccgctacgg ttcatgggta tcaaatcaag tcgttaatca atcaaactaa
     2881 acaaagaaat ttggaatatt tcgacccggt atctcctaaa tctccatcgc tcgtttcatt
     2941 gaactttaga gctccagttt ccttaaccaa aacccaacaa aacgggttac gacccgcaaa
     3001 gcctccgggc tttccggatc cggttgtatc caggaacaac tcgattcaac ccgaacgggc
     3061 tttttacaat catcagccat cggcacccgt agaaaacgtt cacgagaaga agtattacag
     3121 tatgcctgat atttccgggc tccttccgaa acgggattcg caagttttac ccgaacggga
     3181 cgggcccgca cgttacggga ctctcgggca atcggtatat tcaggcccgt tatacagatc
     3241 cgggtctatt tctggatacg gcgggtcaaa tttgtccagg gatgcagctg cttaccagcc
     3301 cgtatccagt tacggtccag ggttcgggtc ggacacgtgg tccatgtggt ctaagcaacc
     3361 atcagaacaa tttggtgtag ctgaaaagat aaaggctcga tcgaatgtgg ggaacattct
     3421 agaagcagac gctgaagcaa atcttctcaa gtcgtttaga ttatgtattg tgaaactatt
     3481 gaatctagaa ggttccgaat ggttgtttaa acagaacggg ggtttagatg aggatcttat
     3541 tgatagtgtg gctgctcgtg agcggtttct gtacgatatc gagggcggtg atgcgaatcg
     3601 aggggcccac ggtgggataa aagttaatga agctgagtac atgaagtatc ttgtgacatc
     3661 ggttccgaat tgtggtgagg gttgtgtatg gagagttgag attataaaaa gcttcggtgt
     3721 atggtgtata catcggattc tcgatctttc gcgtatggaa agcaggcccg aactttgggg
     3781 gaagtataca tacgttctca atcgtctgca gggaataatc gagccagcgt tttcaaaacc
     3841 tcgtgtgccg acaaacccat gtttctgcct tcaacttccg agcgcgtacc gacaaagatc
     3901 atccccaccc aaatccttaa gcagtttgcc gcctccagta aaaccaaaca aagggaaatg
     3961 caccaccgcc gccgccctct tggaatcggt aaaaaatgtc gagaccgcaa tttcatctaa
     4021 aaaaggccga ccaggtactg cagctggtga cgtggcattc cctaaaggta aagaaaatct
     4081 ggcatcagtc cttaaacgtt acaaacgtcg gttgctagct gtatctacag atgggcttag
     4141 ccgcagcccg taagttttgg gcttctcgat gtttcaactc ttaaatagtt tcagaaaggt
     4201 tttagatttt gcgaacgggg gtatgtaact gatgaagaat gaaggggcga taatgtggta
     4261 ttcgcaacgg gtttggaaga caaaagaatg tttttttttt ttttttgggt aggttttcat
     4321 cgatgtcgtt atgtgatgtt aatattttta tgctggcgat atgatggtct accgtcgaat
     4381 tgagatggta tgtctggttt gtttgtttat ttttctcaca tagaaacgag tataaactat
     4441 aaactcatat gtttatgtgt tttatttaaa ctaataataa gttttaggat a
//
LOCUS       XM_071829482            3122 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PAT1 homolog 1-like
            (LOC139839421), mRNA.
ACCESSION   XM_071829482
VERSION     XM_071829482.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3122
                     /gene="LOC139839421"
                     /note="protein PAT1 homolog 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839421"
     CDS             185..2434
                     /gene="LOC139839421"
                     /codon_start=1
                     /product="protein PAT1 homolog 1-like"
                     /protein_id="XP_071685583.1"
                     /db_xref="GeneID:139839421"
                     /translation="MERSDNGKVFDASQYAFFGQKSVDNKVEFGCLEEEHSDNNNFTS
                     GIVDDEYHLFDREEEPGLGSLTDVDDLSTIFSKINRTVSGPRHPGVIGDRGSGSISRE
                     SSSASDWVQDRDLPEWLDQHISDTESINGSRRWSSQSNITDSKPLYRASSYPHEKHQF
                     FTEPILVPSSSLPSFSPGNHNNLPSPRHHSHLNRPSSLGSSQIPFLEPNLSPLSGAPH
                     GSRYNGNRSHMVHHGLTQYSQAQNQWANHHAELLNNTIQQKLLQNTFLSSQYMSPPSM
                     RYSPFALQPYVYDTLPTHPLLNKYGVADKRVKQKSKNNARISRAGSDSSNQKSDKCRI
                     QFRSKYMTSEEIESVLNMQHPATHSNDPYINDYYHQARLAKSSSKNRFCPAHLRDSQQ
                     RSRNSSDSQPHINVDSHGRISFSLIRRPQSLLEVDSSSGDNKSSEQKRSEKHLEQEPM
                     FAARIMIEDGLSVLLDVDDVDRLLKSTQPQDGGSHARQRRQILLEGLAAALQLVDPLG
                     ASSSTLAPKDDVVFLRVVSLPKGRKLISRYLQLLNPGSELARIVCMTIFRHLRFLFGG
                     LPNDIEASETVTSLANIVKTCINSMDLNSLSACLAAVVCSPEQPPLRPLGSPAGDGAS
                     VVLKSVLERATQILTSANSGLQNPTLWQASFDAFFGLLTKYCLSKYDSMVQAMYTQIP
                     PSTEIVLSEAAKEISREMPVELLRASLPHTNDNQRKMLIDFSQKSMHVGGISGPKSGG
                     QVVPESVRG"
     misc_feature    <1406..>1870
                     /gene="LOC139839421"
                     /note="Topoisomerase II-associated protein PAT1; Region:
                     PAT1; pfam09770"
                     /db_xref="CDD:401645"
ORIGIN      
        1 gcgttcgggc atcgattcat accactactg taacaacagc taacaaatca tcacatcaac
       61 aaaaactctt ctgctatgcg aacctcaact tcatacgcaa cttcaattta attcaatcaa
      121 tttcaccaac aaccacaaac gcacacacct ttttctctct cgaaacccta atttcactgt
      181 ttcaatggag agatctgata atggcaaagt gtttgatgct tcacaatatg ctttttttgg
      241 tcaaaaaagt gtggataata aagttgagtt tgggtgttta gaagaagaac atagtgataa
      301 taacaatttt acaagtggaa ttgttgatga tgaatatcat ttatttgacc gagaagagga
      361 accaggttta gggtctctaa cggatgtaga tgatttgtcg actatatttt cgaagataaa
      421 ccgtacagtc agcggaccta gacatcctgg agttattggt gatcgagggt caggttctat
      481 ttcaagggaa agttcatctg catctgactg ggtacaggat cgagatctac ccgagtggtt
      541 agatcaacat atatccgaca ccgaaagcat caacggaagc cgaagatggt cttcacaatc
      601 taatattacc gattctaaac cgttatatcg agcatcatct taccctcacg agaaacacca
      661 attcttcacc gaacctatac tggtaccaag ctcatcgtta ccttcatttt ctcccggtaa
      721 ccataataac ttaccctcgc cacgtcatca ttctcattta aaccgtccgt ctagcctcgg
      781 cagctctcag ataccattct tggaaccaaa tctttcacct ttaagcggtg cacctcacgg
      841 gtctcgttat aatggaaacc ggtcccacat ggtccatcat ggcttgaccc aatactctca
      901 ggcccaaaac caatgggcta atcatcatgc tgaactattg aacaacacca ttcaacaaaa
      961 gctgcttcaa aacacgtttt tatcctcaca atacatgtca ccaccttcaa tgcgttacag
     1021 tccttttgcg cttcaaccgt atgtatacga tacactccct actcatcctt tgcttaacaa
     1081 atacggtgtt gctgataaaa gagtcaaaca aaagagtaaa aacaatgcgc gtatctctcg
     1141 tgcggggtcc gatagtagca accaaaagag tgataaatgt cggatacaat tcagatccaa
     1201 atacatgaca tctgaagaga tcgagagcgt tttgaatatg cagcatcctg caacacatag
     1261 caacgatcct tatatcaacg attattatca ccaagctcgt cttgcaaaaa gttcttccaa
     1321 aaaccggttc tgcccggctc acttaagaga ttcgcaacaa cggtctcgta atagttcaga
     1381 ttcacaaccg catattaacg tcgattctca tggaagaatt tcgttctctc tcattcgtag
     1441 gccccagtcg cttctcgaag ttgattcatc atctggggat aataaaagtt ctgaacagaa
     1501 acgatctgag aaacatttgg aacaagaacc gatgtttgca gctagaatca tgattgaaga
     1561 tggactttct gtacttctag atgtagacga tgttgaccgc ctcctaaagt caactcaacc
     1621 acaagatggc gggtcccacg cgaggcagag gaggcagatt cttctagaag gtctggctgc
     1681 agcccttcaa cttgtggacc cgcttggtgc aagttctagc acgttggctc ctaaagatga
     1741 tgtcgtgttc ttacgggttg tatctcttcc gaaaggtcga aaactcattt ctcgatatct
     1801 tcaacttctt aacccgggta gtgaacttgc acgaatcgta tgcatgacga ttttccgtca
     1861 cttacggttt ttattcggtg gactacctaa cgatattgaa gcttccgaaa cagttacgtc
     1921 actagcaaac atagtaaaaa catgtataaa ttcaatggat ctcaattcgt taagtgcgtg
     1981 tcttgcggct gtcgtgtgtt caccagagca accgccactc cgtccacttg gcagtccagc
     2041 tggcgacggt gcttcggttg tcttaaaatc tgttctagaa agagcgactc agattttaac
     2101 cagtgctaat tctggtttgc aaaatccgac actttggcag gcttcgtttg acgcgttttt
     2161 tggacttttg acgaagtatt gtttaagcaa gtatgatagt atggtgcaag ctatgtacac
     2221 gcagattcca ccgagtacgg aaattgtgtt atccgaagca gcaaaggaga ttagtagaga
     2281 aatgcctgtt gaactacttc gtgctagttt accgcataca aacgataatc agaggaaaat
     2341 gctcattgac ttttctcaaa agtcaatgca tgttggtgga atcagtggtc ctaaaagcgg
     2401 gggtcaggtt gttcctgaat cagtaagagg ataattggtg gttagcacat aatgatcagt
     2461 tgttggttag tttataagtg atttcatctc tgccagttga aggttgtttt tttatgtacc
     2521 tatggtggta gaagtctttc atggatgatg attataaact tttagattat aaatactgtg
     2581 tgactgtgtg aacttgaagg ggattcatga tgcagtgctt caaacgagat actattattc
     2641 tactttcgtt gttgaaattt gcatgtacag attctgcaaa agtttgaatg attttagtta
     2701 tactccattg atgcatttta tggggacgga tgtttagtcg acaagtattt gaaaaagtca
     2761 aactcgttcc cgcctatagt cattattatt gtaccaactg tgaaccgcaa cgatggagca
     2821 tgttttgttt ttcattgctg aggggacaag tggatgtaaa agatttaagc tggaacaagc
     2881 ctatgggacg tgttttttgt gtctatttcg aaagagtagt tgactatatt gaaagggcgg
     2941 tgatatttta catagttata attatataag ttcatcaaaa tttgcattgt ttgtcaatat
     3001 agttgattaa ggctttgatg tatttattaa aaaatattaa agatggtacg aaaagttcat
     3061 gaacaaagtt ggcgacaaat gaaaaggtta taattgttgt gaaacttgtg tggaaatatc
     3121 ac
//
LOCUS       XM_071829483            3041 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR-RED ELONGATED
            HYPOCOTYL 3 (LOC139839422), transcript variant X1, mRNA.
ACCESSION   XM_071829483
VERSION     XM_071829483.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3041
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3041
                     /gene="LOC139839422"
                     /note="protein FAR-RED ELONGATED HYPOCOTYL 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139839422"
     CDS             190..2694
                     /gene="LOC139839422"
                     /codon_start=1
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3 isoform
                     X1"
                     /protein_id="XP_071685584.1"
                     /db_xref="GeneID:139839422"
                     /translation="MDIDLRLPSGEHEKEENEETNEIPNMLDGEHKMHDDEVLGHNMG
                     INSPSIDMVDYKEDTNLEPLAGMEFESHGEAYSFYQEYARSMGFCTAIQNSRRSKTSR
                     EFIDAKFACSRYGTKREHDKSFNRPRSRQGTNQDPENASGRRSCSKTDCKASMHVKRR
                     PDGKWIIHRFEKDHNHELLPAQAVSEQTRKMYAAMARQFAEYKNVVGYKNDSNNPFDK
                     SRGTPLEAGDTSILCKFFTQLQSMNSNFFYAIDVGEDQRVKNMIWADAKTRHDYVNFC
                     DVVSFDTSYIKNKYRMPLALFVGVNQHYQFMLLGCALLSDESISTYLWALQTWLSAMG
                     GRAPQVIITDKDEYIESAVSQVFPSSKHCFCLWSITGKISETLKNNNYMAKFEKCIYR
                     SWTDEQFDKRWSKLVDRFGLKEYDWMHSLYVSRKQWVPIYMRDVFLGGMSTLQRSESV
                     NCFFDKYVHRKTSVQEFVRQYESIIQDRYEEEAKQDLDTWNKLPALKSPSPFEKHVSN
                     IYTHAVFKKFQAEVLGASACLRKEEAHEDMIKTFRVTEYEKLDFSVYYNESTSEVLCS
                     CRLFEFKGFLCRHVLLVLQLCSLSAIPSQYILKRWTKDVKNRGVISAEGSELVQYRVQ
                     RYNDLCQRAIKLGEEGSLSQESYNFAVRALEDVYANVVALNNSSKNVNEGGTSTGTGV
                     LRVEDDNQSRIMRTNKKKNPMKKRKASLEQDIMTVGAQDSLQQLDKLSSRSVALDGYF
                     GPQQSMQGMVQLNLMAPSRDNYYGNQQAIQGLGQLNSIAPNHESYYGAQPTLHGLNSC
                     LQGQMDFFRTPGFTYGIREEPSVRSNQLHDDGSRHG"
     misc_feature    190..2688
                     /gene="LOC139839422"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
     polyA_site      3041
                     /gene="LOC139839422"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gagcgagtca aaccaaaccc taattttcaa tttggggcca aaaagtttcg ttcgtccact
       61 cgctcaaccc cctcgcgtgg atattttcag atcgccatac aaaatccaat ttgtatcatc
      121 accatcgatt ctcatttact acccgcttca ggtagcaacg aattaagtga acatacgtaa
      181 attgttgtta tggatatcga tcttaggctc ccatctggag aacatgaaaa ggaagaaaac
      241 gaagagacga acgagatacc caatatgtta gatggtgaac ataaaatgca tgatgatgaa
      301 gttttaggtc acaatatggg tataaattct ccatcgattg atatggtaga ttataaagaa
      361 gatacaaatc tcgagccttt agctggtatg gaatttgaat cacacggtga agcgtattct
      421 ttttatcaag aatacgcaag atctatgggt ttctgtactg caatacaaaa tagccgtcgt
      481 tcaaaaacat cacgcgaatt catcgatgca aaatttgcgt gttcgagata cggaacgaaa
      541 cgtgaacatg ataaatcgtt taatcgacct cgtagtcgac aaggaaccaa tcaagatccc
      601 gaaaatgcat ctgggagaag atcgtgctcc aaaaccgact gcaaagcaag catgcatgta
      661 aaaagacgac ccgatggaaa atggatcatc catcggttcg aaaaggatca caatcatgaa
      721 ctgttacctg cacaagctgt cagtgaacaa acgagaaaaa tgtatgctgc catggcacga
      781 caatttgcag agtacaaaaa tgtggttggt tataaaaacg attcaaataa tccgtttgat
      841 aagtctcgtg gtactcctct tgaagctgga gatacaagta tattatgcaa gttttttact
      901 cagttgcaga gtatgaattc caactttttt tatgcaatag atgtaggtga agatcaacgc
      961 gtgaaaaata tgatatgggc ggatgccaaa acgaggcacg attatgtcaa tttttgtgat
     1021 gttgtgtcgt ttgatacatc gtacattaaa aacaaatatc gaatgccgtt agctcttttt
     1081 gttggagtca accaacatta tcagttcatg ctgcttggct gtgcgctact atcggacgag
     1141 agcatttcga cttatttgtg ggccctgcag acatggttga gtgcgatggg cggacgggcc
     1201 ccacaagtca taatcaccga caaagacgag tatatcgaat ctgccgtttc acaagtattc
     1261 ccgtcttcaa agcattgttt ttgtttgtgg agtataacag gcaaaatatc tgaaacactt
     1321 aaaaataata actatatggc gaaatttgaa aagtgtattt ataggtcgtg gaccgatgaa
     1381 cagtttgaca aaagatggtc aaaattggtc gatcggtttg gtctaaaaga gtatgattgg
     1441 atgcattcgt tatatgtaag ccgaaaacag tgggtcccga tttacatgag ggatgttttt
     1501 ttaggtggga tgtcaactct tcaacgttca gagagtgtta attgtttttt tgacaaatac
     1561 gtgcaccgga aaacgagcgt gcaagaattt gttagacaat acgaaagtat tattcaagat
     1621 aggtatgaag aagaggcaaa acaggatttg gatacatgga ataaactgcc tgcattaaaa
     1681 tcaccatcac cttttgaaaa acatgtttca aacatatata cgcatgcagt tttcaagaaa
     1741 tttcaagctg aagttttggg tgcgtctgct tgtttacgta aagaagaggc acatgaagat
     1801 atgatcaaaa cttttagggt tacggaatat gaaaagttgg atttcagcgt ttattataac
     1861 gagtcaacat ctgaagtgtt gtgtagttgt cggttgtttg agtttaaggg ttttttatgt
     1921 agacatgttt tgcttgttct gcaattatgt agtctttctg caataccgtc tcagtatatt
     1981 ttgaaaaggt ggacaaaaga tgtgaaaaac cggggggtaa tatcggcaga agggtctgag
     2041 ttggttcagt atagagttca aagatataat gacttatgtc aacgagcgat taaattgggt
     2101 gaagaaggat cattatcgca agaaagttat aattttgcag ttcgcgcact tgaagatgtt
     2161 tatgcaaatg ttgttgcttt gaataattca agtaagaatg tcaatgaagg tggaacatcg
     2221 accggtacag gtgttttaag agttgaagat gataatcaaa gcagaatcat gcgaacgaat
     2281 aaaaagaaga atcctatgaa gaaaaggaag gcaagcttgg agcaggatat tatgactgtt
     2341 ggagcgcaag atagcttgca gcagctggac aaattgagct cacggtcagt tgcactagat
     2401 ggttattttg gcccacaaca aagcatgcaa ggaatggtac agctcaactt gatggcacct
     2461 tcaagagaca attattacgg aaatcaacaa gctattcagg ggctggggca gttgaattca
     2521 atagcaccaa atcacgagag ctattatggc gctcagccaa cacttcatgg tttgaattct
     2581 tgcctgcagg gacaaatgga cttctttcgg acacctggtt tcacgtatgg cattcgggag
     2641 gaacctagtg tgagaagcaa tcaattgcat gatgatggct caagacatgg atagacttat
     2701 ttagcaacca ataacctttg ttcatttgcc aagcaaaaaa tacttttcag accgaaacgg
     2761 ccgtatcacg gactagatgg aacctacctt tgaacccaaa aagtcactac agggagtttg
     2821 aaatgtagag agaaccagtc tttacatatt atctcctaca cgtgttatag agagcaggta
     2881 ggacccgcga tttcacaaaa ttaaaatctg ttattatatc acatattagt catgctaata
     2941 tgtggtttaa cttgtgtgat aatcagaagt tagagtcagc atatgtaagc atttaattta
     3001 tattgttgta aaatgattgt ggaatgaaat tatttcagta a
//
LOCUS       XM_071829484            3059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR-RED ELONGATED
            HYPOCOTYL 3 (LOC139839422), transcript variant X2, mRNA.
ACCESSION   XM_071829484
VERSION     XM_071829484.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3059
                     /gene="LOC139839422"
                     /note="protein FAR-RED ELONGATED HYPOCOTYL 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139839422"
     CDS             208..2712
                     /gene="LOC139839422"
                     /codon_start=1
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3 isoform
                     X1"
                     /protein_id="XP_071685585.1"
                     /db_xref="GeneID:139839422"
                     /translation="MDIDLRLPSGEHEKEENEETNEIPNMLDGEHKMHDDEVLGHNMG
                     INSPSIDMVDYKEDTNLEPLAGMEFESHGEAYSFYQEYARSMGFCTAIQNSRRSKTSR
                     EFIDAKFACSRYGTKREHDKSFNRPRSRQGTNQDPENASGRRSCSKTDCKASMHVKRR
                     PDGKWIIHRFEKDHNHELLPAQAVSEQTRKMYAAMARQFAEYKNVVGYKNDSNNPFDK
                     SRGTPLEAGDTSILCKFFTQLQSMNSNFFYAIDVGEDQRVKNMIWADAKTRHDYVNFC
                     DVVSFDTSYIKNKYRMPLALFVGVNQHYQFMLLGCALLSDESISTYLWALQTWLSAMG
                     GRAPQVIITDKDEYIESAVSQVFPSSKHCFCLWSITGKISETLKNNNYMAKFEKCIYR
                     SWTDEQFDKRWSKLVDRFGLKEYDWMHSLYVSRKQWVPIYMRDVFLGGMSTLQRSESV
                     NCFFDKYVHRKTSVQEFVRQYESIIQDRYEEEAKQDLDTWNKLPALKSPSPFEKHVSN
                     IYTHAVFKKFQAEVLGASACLRKEEAHEDMIKTFRVTEYEKLDFSVYYNESTSEVLCS
                     CRLFEFKGFLCRHVLLVLQLCSLSAIPSQYILKRWTKDVKNRGVISAEGSELVQYRVQ
                     RYNDLCQRAIKLGEEGSLSQESYNFAVRALEDVYANVVALNNSSKNVNEGGTSTGTGV
                     LRVEDDNQSRIMRTNKKKNPMKKRKASLEQDIMTVGAQDSLQQLDKLSSRSVALDGYF
                     GPQQSMQGMVQLNLMAPSRDNYYGNQQAIQGLGQLNSIAPNHESYYGAQPTLHGLNSC
                     LQGQMDFFRTPGFTYGIREEPSVRSNQLHDDGSRHG"
     misc_feature    208..2706
                     /gene="LOC139839422"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
     polyA_site      3059
                     /gene="LOC139839422"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccacctctct cataatttat atacatttaa tcaacgccta aacccacccc atggattatg
       61 cactactttt ctttatgatt ctactttcaa gtatgaagct ttctttcaat ttgaaactgg
      121 gtttgtatcg agtctacaca aaacaacatg atttcaattt gtgccaaagg tagcaacgaa
      181 ttaagtgaac atacgtaaat tgttgttatg gatatcgatc ttaggctccc atctggagaa
      241 catgaaaagg aagaaaacga agagacgaac gagataccca atatgttaga tggtgaacat
      301 aaaatgcatg atgatgaagt tttaggtcac aatatgggta taaattctcc atcgattgat
      361 atggtagatt ataaagaaga tacaaatctc gagcctttag ctggtatgga atttgaatca
      421 cacggtgaag cgtattcttt ttatcaagaa tacgcaagat ctatgggttt ctgtactgca
      481 atacaaaata gccgtcgttc aaaaacatca cgcgaattca tcgatgcaaa atttgcgtgt
      541 tcgagatacg gaacgaaacg tgaacatgat aaatcgttta atcgacctcg tagtcgacaa
      601 ggaaccaatc aagatcccga aaatgcatct gggagaagat cgtgctccaa aaccgactgc
      661 aaagcaagca tgcatgtaaa aagacgaccc gatggaaaat ggatcatcca tcggttcgaa
      721 aaggatcaca atcatgaact gttacctgca caagctgtca gtgaacaaac gagaaaaatg
      781 tatgctgcca tggcacgaca atttgcagag tacaaaaatg tggttggtta taaaaacgat
      841 tcaaataatc cgtttgataa gtctcgtggt actcctcttg aagctggaga tacaagtata
      901 ttatgcaagt tttttactca gttgcagagt atgaattcca acttttttta tgcaatagat
      961 gtaggtgaag atcaacgcgt gaaaaatatg atatgggcgg atgccaaaac gaggcacgat
     1021 tatgtcaatt tttgtgatgt tgtgtcgttt gatacatcgt acattaaaaa caaatatcga
     1081 atgccgttag ctctttttgt tggagtcaac caacattatc agttcatgct gcttggctgt
     1141 gcgctactat cggacgagag catttcgact tatttgtggg ccctgcagac atggttgagt
     1201 gcgatgggcg gacgggcccc acaagtcata atcaccgaca aagacgagta tatcgaatct
     1261 gccgtttcac aagtattccc gtcttcaaag cattgttttt gtttgtggag tataacaggc
     1321 aaaatatctg aaacacttaa aaataataac tatatggcga aatttgaaaa gtgtatttat
     1381 aggtcgtgga ccgatgaaca gtttgacaaa agatggtcaa aattggtcga tcggtttggt
     1441 ctaaaagagt atgattggat gcattcgtta tatgtaagcc gaaaacagtg ggtcccgatt
     1501 tacatgaggg atgttttttt aggtgggatg tcaactcttc aacgttcaga gagtgttaat
     1561 tgtttttttg acaaatacgt gcaccggaaa acgagcgtgc aagaatttgt tagacaatac
     1621 gaaagtatta ttcaagatag gtatgaagaa gaggcaaaac aggatttgga tacatggaat
     1681 aaactgcctg cattaaaatc accatcacct tttgaaaaac atgtttcaaa catatatacg
     1741 catgcagttt tcaagaaatt tcaagctgaa gttttgggtg cgtctgcttg tttacgtaaa
     1801 gaagaggcac atgaagatat gatcaaaact tttagggtta cggaatatga aaagttggat
     1861 ttcagcgttt attataacga gtcaacatct gaagtgttgt gtagttgtcg gttgtttgag
     1921 tttaagggtt ttttatgtag acatgttttg cttgttctgc aattatgtag tctttctgca
     1981 ataccgtctc agtatatttt gaaaaggtgg acaaaagatg tgaaaaaccg gggggtaata
     2041 tcggcagaag ggtctgagtt ggttcagtat agagttcaaa gatataatga cttatgtcaa
     2101 cgagcgatta aattgggtga agaaggatca ttatcgcaag aaagttataa ttttgcagtt
     2161 cgcgcacttg aagatgttta tgcaaatgtt gttgctttga ataattcaag taagaatgtc
     2221 aatgaaggtg gaacatcgac cggtacaggt gttttaagag ttgaagatga taatcaaagc
     2281 agaatcatgc gaacgaataa aaagaagaat cctatgaaga aaaggaaggc aagcttggag
     2341 caggatatta tgactgttgg agcgcaagat agcttgcagc agctggacaa attgagctca
     2401 cggtcagttg cactagatgg ttattttggc ccacaacaaa gcatgcaagg aatggtacag
     2461 ctcaacttga tggcaccttc aagagacaat tattacggaa atcaacaagc tattcagggg
     2521 ctggggcagt tgaattcaat agcaccaaat cacgagagct attatggcgc tcagccaaca
     2581 cttcatggtt tgaattcttg cctgcaggga caaatggact tctttcggac acctggtttc
     2641 acgtatggca ttcgggagga acctagtgtg agaagcaatc aattgcatga tgatggctca
     2701 agacatggat agacttattt agcaaccaat aacctttgtt catttgccaa gcaaaaaata
     2761 cttttcagac cgaaacggcc gtatcacgga ctagatggaa cctacctttg aacccaaaaa
     2821 gtcactacag ggagtttgaa atgtagagag aaccagtctt tacatattat ctcctacacg
     2881 tgttatagag agcaggtagg acccgcgatt tcacaaaatt aaaatctgtt attatatcac
     2941 atattagtca tgctaatatg tggtttaact tgtgtgataa tcagaagtta gagtcagcat
     3001 atgtaagcat ttaatttata ttgttgtaaa atgattgtgg aatgaaatta tttcagtaa
//
LOCUS       XM_071829485            3287 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR-RED ELONGATED
            HYPOCOTYL 3 (LOC139839422), transcript variant X3, mRNA.
ACCESSION   XM_071829485
VERSION     XM_071829485.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3287
                     /gene="LOC139839422"
                     /note="protein FAR-RED ELONGATED HYPOCOTYL 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139839422"
     CDS             436..2940
                     /gene="LOC139839422"
                     /codon_start=1
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3 isoform
                     X1"
                     /protein_id="XP_071685586.1"
                     /db_xref="GeneID:139839422"
                     /translation="MDIDLRLPSGEHEKEENEETNEIPNMLDGEHKMHDDEVLGHNMG
                     INSPSIDMVDYKEDTNLEPLAGMEFESHGEAYSFYQEYARSMGFCTAIQNSRRSKTSR
                     EFIDAKFACSRYGTKREHDKSFNRPRSRQGTNQDPENASGRRSCSKTDCKASMHVKRR
                     PDGKWIIHRFEKDHNHELLPAQAVSEQTRKMYAAMARQFAEYKNVVGYKNDSNNPFDK
                     SRGTPLEAGDTSILCKFFTQLQSMNSNFFYAIDVGEDQRVKNMIWADAKTRHDYVNFC
                     DVVSFDTSYIKNKYRMPLALFVGVNQHYQFMLLGCALLSDESISTYLWALQTWLSAMG
                     GRAPQVIITDKDEYIESAVSQVFPSSKHCFCLWSITGKISETLKNNNYMAKFEKCIYR
                     SWTDEQFDKRWSKLVDRFGLKEYDWMHSLYVSRKQWVPIYMRDVFLGGMSTLQRSESV
                     NCFFDKYVHRKTSVQEFVRQYESIIQDRYEEEAKQDLDTWNKLPALKSPSPFEKHVSN
                     IYTHAVFKKFQAEVLGASACLRKEEAHEDMIKTFRVTEYEKLDFSVYYNESTSEVLCS
                     CRLFEFKGFLCRHVLLVLQLCSLSAIPSQYILKRWTKDVKNRGVISAEGSELVQYRVQ
                     RYNDLCQRAIKLGEEGSLSQESYNFAVRALEDVYANVVALNNSSKNVNEGGTSTGTGV
                     LRVEDDNQSRIMRTNKKKNPMKKRKASLEQDIMTVGAQDSLQQLDKLSSRSVALDGYF
                     GPQQSMQGMVQLNLMAPSRDNYYGNQQAIQGLGQLNSIAPNHESYYGAQPTLHGLNSC
                     LQGQMDFFRTPGFTYGIREEPSVRSNQLHDDGSRHG"
     misc_feature    436..2934
                     /gene="LOC139839422"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
     polyA_site      3287
                     /gene="LOC139839422"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attatataat cgttaatcgt tttgtaacta tgtaacggtg ttacttagtt tcagatatat
       61 gtttatgggt tactgtttat actgtaaaag tttgttaatt ttctcaaaat aatttaattc
      121 aagattgtaa atctgtaacg ggtcatctgt ctttattcat ttgattgctg tgcatttgcg
      181 tctgtagagt tcagtttgat cgtttgcaga ttataattct gttattattt taccacatta
      241 gtattttcgg atattgaata cttgaggttg atgtatgtat tgtcgatcat catatgatgt
      301 ttgtactttg gttgagttca gttatattgc cattggtttc ttagttcgaa gaatcacttt
      361 tcggaatcat taattgatgt tacctgtaaa acaaaaggta gcaacgaatt aagtgaacat
      421 acgtaaattg ttgttatgga tatcgatctt aggctcccat ctggagaaca tgaaaaggaa
      481 gaaaacgaag agacgaacga gatacccaat atgttagatg gtgaacataa aatgcatgat
      541 gatgaagttt taggtcacaa tatgggtata aattctccat cgattgatat ggtagattat
      601 aaagaagata caaatctcga gcctttagct ggtatggaat ttgaatcaca cggtgaagcg
      661 tattcttttt atcaagaata cgcaagatct atgggtttct gtactgcaat acaaaatagc
      721 cgtcgttcaa aaacatcacg cgaattcatc gatgcaaaat ttgcgtgttc gagatacgga
      781 acgaaacgtg aacatgataa atcgtttaat cgacctcgta gtcgacaagg aaccaatcaa
      841 gatcccgaaa atgcatctgg gagaagatcg tgctccaaaa ccgactgcaa agcaagcatg
      901 catgtaaaaa gacgacccga tggaaaatgg atcatccatc ggttcgaaaa ggatcacaat
      961 catgaactgt tacctgcaca agctgtcagt gaacaaacga gaaaaatgta tgctgccatg
     1021 gcacgacaat ttgcagagta caaaaatgtg gttggttata aaaacgattc aaataatccg
     1081 tttgataagt ctcgtggtac tcctcttgaa gctggagata caagtatatt atgcaagttt
     1141 tttactcagt tgcagagtat gaattccaac tttttttatg caatagatgt aggtgaagat
     1201 caacgcgtga aaaatatgat atgggcggat gccaaaacga ggcacgatta tgtcaatttt
     1261 tgtgatgttg tgtcgtttga tacatcgtac attaaaaaca aatatcgaat gccgttagct
     1321 ctttttgttg gagtcaacca acattatcag ttcatgctgc ttggctgtgc gctactatcg
     1381 gacgagagca tttcgactta tttgtgggcc ctgcagacat ggttgagtgc gatgggcgga
     1441 cgggccccac aagtcataat caccgacaaa gacgagtata tcgaatctgc cgtttcacaa
     1501 gtattcccgt cttcaaagca ttgtttttgt ttgtggagta taacaggcaa aatatctgaa
     1561 acacttaaaa ataataacta tatggcgaaa tttgaaaagt gtatttatag gtcgtggacc
     1621 gatgaacagt ttgacaaaag atggtcaaaa ttggtcgatc ggtttggtct aaaagagtat
     1681 gattggatgc attcgttata tgtaagccga aaacagtggg tcccgattta catgagggat
     1741 gtttttttag gtgggatgtc aactcttcaa cgttcagaga gtgttaattg tttttttgac
     1801 aaatacgtgc accggaaaac gagcgtgcaa gaatttgtta gacaatacga aagtattatt
     1861 caagataggt atgaagaaga ggcaaaacag gatttggata catggaataa actgcctgca
     1921 ttaaaatcac catcaccttt tgaaaaacat gtttcaaaca tatatacgca tgcagttttc
     1981 aagaaatttc aagctgaagt tttgggtgcg tctgcttgtt tacgtaaaga agaggcacat
     2041 gaagatatga tcaaaacttt tagggttacg gaatatgaaa agttggattt cagcgtttat
     2101 tataacgagt caacatctga agtgttgtgt agttgtcggt tgtttgagtt taagggtttt
     2161 ttatgtagac atgttttgct tgttctgcaa ttatgtagtc tttctgcaat accgtctcag
     2221 tatattttga aaaggtggac aaaagatgtg aaaaaccggg gggtaatatc ggcagaaggg
     2281 tctgagttgg ttcagtatag agttcaaaga tataatgact tatgtcaacg agcgattaaa
     2341 ttgggtgaag aaggatcatt atcgcaagaa agttataatt ttgcagttcg cgcacttgaa
     2401 gatgtttatg caaatgttgt tgctttgaat aattcaagta agaatgtcaa tgaaggtgga
     2461 acatcgaccg gtacaggtgt tttaagagtt gaagatgata atcaaagcag aatcatgcga
     2521 acgaataaaa agaagaatcc tatgaagaaa aggaaggcaa gcttggagca ggatattatg
     2581 actgttggag cgcaagatag cttgcagcag ctggacaaat tgagctcacg gtcagttgca
     2641 ctagatggtt attttggccc acaacaaagc atgcaaggaa tggtacagct caacttgatg
     2701 gcaccttcaa gagacaatta ttacggaaat caacaagcta ttcaggggct ggggcagttg
     2761 aattcaatag caccaaatca cgagagctat tatggcgctc agccaacact tcatggtttg
     2821 aattcttgcc tgcagggaca aatggacttc tttcggacac ctggtttcac gtatggcatt
     2881 cgggaggaac ctagtgtgag aagcaatcaa ttgcatgatg atggctcaag acatggatag
     2941 acttatttag caaccaataa cctttgttca tttgccaagc aaaaaatact tttcagaccg
     3001 aaacggccgt atcacggact agatggaacc tacctttgaa cccaaaaagt cactacaggg
     3061 agtttgaaat gtagagagaa ccagtcttta catattatct cctacacgtg ttatagagag
     3121 caggtaggac ccgcgatttc acaaaattaa aatctgttat tatatcacat attagtcatg
     3181 ctaatatgtg gtttaacttg tgtgataatc agaagttaga gtcagcatat gtaagcattt
     3241 aatttatatt gttgtaaaat gattgtggaa tgaaattatt tcagtaa
//
LOCUS       XM_071829486            3024 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR-RED ELONGATED
            HYPOCOTYL 3 (LOC139839422), transcript variant X4, mRNA.
ACCESSION   XM_071829486
VERSION     XM_071829486.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3024
                     /gene="LOC139839422"
                     /note="protein FAR-RED ELONGATED HYPOCOTYL 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839422"
     CDS             188..2677
                     /gene="LOC139839422"
                     /codon_start=1
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3 isoform
                     X2"
                     /protein_id="XP_071685587.1"
                     /db_xref="GeneID:139839422"
                     /translation="MDIDLRLPSGEHEKEENEETNEIPNMLDGEHKMHDDEVLGHNMG
                     INSPSIDMVDYKEDTNLEPLAGMEFESHGEAYSFYQEYARSMGFCTAIQNSRRSKTSR
                     EFIDAKFACSRYGTKREHDKSFNRPRSRQGTNQDPENASGRRSCSKTDCKASMHVKRR
                     PDGKWIIHRFEKDHNHELLPAQAVSEQTRKMYAAMARQFAEYKNVVGYKNDSNNPFDK
                     SRGTPLEAGDTSILCKFFTQLQSMNSNFFYAIDVGEDQRVKNMIWADAKTRHDYVNFC
                     DVVSFDTSYIKNKYRMPLALFVGVNQHYQFMLLGCALLSDESISTYLWALQTWLSAMG
                     GRAPQVIITDKDEYIESAVSQVFPSSKHCFCLWSITGKISETLKNNNYMAKFEKCIYR
                     SWTDEQFDKRWSKLVDRFGLKEYDWMHSLYVSRKQWVPIYMRDVFLGGMSTLQRSESV
                     NCFFDKYVHRKTSVQEFVRQYESIIQDRYEEEAKQDLDTWNKLPALKSPSPFEKHVSN
                     IYTHAVFKKFQAEVLGASACLRKEEAHEDMIKTFRVTEYEKLDFSVYYNESTSEVLCS
                     CRLFEFKGFLCRHVLLVLQLCSLSAIPSQYILKRWTKDVKNRGVISAEGSELVQYRVQ
                     RYNDLCQRAIKLGEEGSLSQESYNFAVRALEDVYANVVALNNSSKNVNEGGTSTGTGV
                     LRVEDDNQSRIMRTNKKKNPMKKRKASLEQDIMTVGAQDSLQQLDKLSSRSVALDGYF
                     GPQQSMQGMVQLNLMAPSRDNYYGNQQAIQGLGQLNSIAPNHESYYGAQPTLHGLGQM
                     DFFRTPGFTYGIREEPSVRSNQLHDDGSRHG"
     misc_feature    188..2671
                     /gene="LOC139839422"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
     polyA_site      3024
                     /gene="LOC139839422"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcgagtcaaa ccaaacccta attttcaatt tggggccaaa aagtttcgtt cgtccactcg
       61 ctcaaccccc tcgcgtggat attttcagat cgccatacaa aatccaattt gtatcatcac
      121 catcgattct catttactac ccgcttcagg tagcaacgaa ttaagtgaac atacgtaaat
      181 tgttgttatg gatatcgatc ttaggctccc atctggagaa catgaaaagg aagaaaacga
      241 agagacgaac gagataccca atatgttaga tggtgaacat aaaatgcatg atgatgaagt
      301 tttaggtcac aatatgggta taaattctcc atcgattgat atggtagatt ataaagaaga
      361 tacaaatctc gagcctttag ctggtatgga atttgaatca cacggtgaag cgtattcttt
      421 ttatcaagaa tacgcaagat ctatgggttt ctgtactgca atacaaaata gccgtcgttc
      481 aaaaacatca cgcgaattca tcgatgcaaa atttgcgtgt tcgagatacg gaacgaaacg
      541 tgaacatgat aaatcgttta atcgacctcg tagtcgacaa ggaaccaatc aagatcccga
      601 aaatgcatct gggagaagat cgtgctccaa aaccgactgc aaagcaagca tgcatgtaaa
      661 aagacgaccc gatggaaaat ggatcatcca tcggttcgaa aaggatcaca atcatgaact
      721 gttacctgca caagctgtca gtgaacaaac gagaaaaatg tatgctgcca tggcacgaca
      781 atttgcagag tacaaaaatg tggttggtta taaaaacgat tcaaataatc cgtttgataa
      841 gtctcgtggt actcctcttg aagctggaga tacaagtata ttatgcaagt tttttactca
      901 gttgcagagt atgaattcca acttttttta tgcaatagat gtaggtgaag atcaacgcgt
      961 gaaaaatatg atatgggcgg atgccaaaac gaggcacgat tatgtcaatt tttgtgatgt
     1021 tgtgtcgttt gatacatcgt acattaaaaa caaatatcga atgccgttag ctctttttgt
     1081 tggagtcaac caacattatc agttcatgct gcttggctgt gcgctactat cggacgagag
     1141 catttcgact tatttgtggg ccctgcagac atggttgagt gcgatgggcg gacgggcccc
     1201 acaagtcata atcaccgaca aagacgagta tatcgaatct gccgtttcac aagtattccc
     1261 gtcttcaaag cattgttttt gtttgtggag tataacaggc aaaatatctg aaacacttaa
     1321 aaataataac tatatggcga aatttgaaaa gtgtatttat aggtcgtgga ccgatgaaca
     1381 gtttgacaaa agatggtcaa aattggtcga tcggtttggt ctaaaagagt atgattggat
     1441 gcattcgtta tatgtaagcc gaaaacagtg ggtcccgatt tacatgaggg atgttttttt
     1501 aggtgggatg tcaactcttc aacgttcaga gagtgttaat tgtttttttg acaaatacgt
     1561 gcaccggaaa acgagcgtgc aagaatttgt tagacaatac gaaagtatta ttcaagatag
     1621 gtatgaagaa gaggcaaaac aggatttgga tacatggaat aaactgcctg cattaaaatc
     1681 accatcacct tttgaaaaac atgtttcaaa catatatacg catgcagttt tcaagaaatt
     1741 tcaagctgaa gttttgggtg cgtctgcttg tttacgtaaa gaagaggcac atgaagatat
     1801 gatcaaaact tttagggtta cggaatatga aaagttggat ttcagcgttt attataacga
     1861 gtcaacatct gaagtgttgt gtagttgtcg gttgtttgag tttaagggtt ttttatgtag
     1921 acatgttttg cttgttctgc aattatgtag tctttctgca ataccgtctc agtatatttt
     1981 gaaaaggtgg acaaaagatg tgaaaaaccg gggggtaata tcggcagaag ggtctgagtt
     2041 ggttcagtat agagttcaaa gatataatga cttatgtcaa cgagcgatta aattgggtga
     2101 agaaggatca ttatcgcaag aaagttataa ttttgcagtt cgcgcacttg aagatgttta
     2161 tgcaaatgtt gttgctttga ataattcaag taagaatgtc aatgaaggtg gaacatcgac
     2221 cggtacaggt gttttaagag ttgaagatga taatcaaagc agaatcatgc gaacgaataa
     2281 aaagaagaat cctatgaaga aaaggaaggc aagcttggag caggatatta tgactgttgg
     2341 agcgcaagat agcttgcagc agctggacaa attgagctca cggtcagttg cactagatgg
     2401 ttattttggc ccacaacaaa gcatgcaagg aatggtacag ctcaacttga tggcaccttc
     2461 aagagacaat tattacggaa atcaacaagc tattcagggg ctggggcagt tgaattcaat
     2521 agcaccaaat cacgagagct attatggcgc tcagccaaca cttcatggtt tgggacaaat
     2581 ggacttcttt cggacacctg gtttcacgta tggcattcgg gaggaaccta gtgtgagaag
     2641 caatcaattg catgatgatg gctcaagaca tggatagact tatttagcaa ccaataacct
     2701 ttgttcattt gccaagcaaa aaatactttt cagaccgaaa cggccgtatc acggactaga
     2761 tggaacctac ctttgaaccc aaaaagtcac tacagggagt ttgaaatgta gagagaacca
     2821 gtctttacat attatctcct acacgtgtta tagagagcag gtaggacccg cgatttcaca
     2881 aaattaaaat ctgttattat atcacatatt agtcatgcta atatgtggtt taacttgtgt
     2941 gataatcaga agttagagtc agcatatgta agcatttaat ttatattgtt gtaaaatgat
     3001 tgtggaatga aattatttca gtaa
//
LOCUS       XM_071829487            2671 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein VACUOLELESS1-like
            (LOC139839423), mRNA.
ACCESSION   XM_071829487
VERSION     XM_071829487.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2671
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2671
                     /gene="LOC139839423"
                     /note="protein VACUOLELESS1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839423"
     CDS             33..2558
                     /gene="LOC139839423"
                     /codon_start=1
                     /product="protein VACUOLELESS1-like"
                     /protein_id="XP_071685588.1"
                     /db_xref="GeneID:139839423"
                     /translation="MAGVSIAAEWQLLGDKYYRKPEIYQLQWKNIDLSRNKIACAPFS
                     GPIAIIRDDSKIVQLYAESALRKLRIFNSAGRQLSETIWRNSGGRLIGLSWTDEQILV
                     CITQDGTVYRYDIHCKLIEPNISLGHECFEHSVVECVFWGNGVVCMNEVFELFCIPDM
                     KNPKACKLADTGIDEFPLCMTVIEPKYTMSGNVEVLLGVGDHVLLVEEDGVQSVGEGL
                     GPLQKMVVSCNGKLLASFTHDGQLLVMPTDFSSIIFEYACESALAPEQLVWCGMDSVL
                     LYWEDMLLMVGPYGDPVRYLYDEPIVLIPECDGARILSNTKMEFLQRVPASTESIFKI
                     GSTEPAALLYDALDHFDRRSAKADENLRLIRASLPEAVEACVDAAGHEFDPSLQQTLL
                     RAASYGQAFCSQFQRESIQEMSKTLRVLNAVRSPETGIPLSIHQYKLLTPSVLIGRLV
                     NAHQHLLALRISEYLGMNQEVVIMHWACSKLTVSSAIPDATLLEILLDKLKMSRSISY
                     AAVAAHADQTGRRKLAAMLVEHEPLSSKQVPLLLGIGEEDTALTKATESGDTDLVYLV
                     LFHIWQKRPALELFGMIQARPLARDLFIRYARCYTHEFLKDFFLSTGQLHDVAFLLWK
                     ESWEIAKNPMASRGSPLHGPRIKLIEKAQHLFAETKEHLFESKAAEEHAKLLRIQHEL
                     EVSTKQPIFVDSSISDTIRTCIVLGNHRAALKVKTEFKVSEKRWYWLKVFALATIRDW
                     DALEKFSKEKRPPIGFRPFVEACIDAEEKGEALKYITKLADPRERAEAYARIGMAKEA
                     ADAASQTKDGELLERLKNTLQQNSTATSIFDTLRDRLSFPGVS"
     misc_feature    54..1235
                     /gene="LOC139839423"
                     /note="Vps16, N-terminal region; Region: Vps16_N;
                     pfam04841"
                     /db_xref="CDD:252829"
     misc_feature    1548..2507
                     /gene="LOC139839423"
                     /note="Vps16, C-terminal region; Region: Vps16_C;
                     pfam04840"
                     /db_xref="CDD:282668"
ORIGIN      
        1 cataaaggtc accggcgatc acaatcataa aaatggccgg cgtatcaatt gccgccgaat
       61 ggcaacttct cggcgacaaa tactaccgta aacctgaaat ctaccaatta caatggaaaa
      121 acattgatct ttcacgcaac aaaatcgcct gcgccccatt ctccggtcca atcgccatta
      181 tccgtgacga ttccaaaatt gttcaactgt acgccgaatc cgccctccgt aaacttcgca
      241 tcttcaattc agccggccgt caactctccg aaaccatctg gcgcaactcc ggcggccgat
      301 tgatcggatt atcatggacc gatgaacaaa tcctcgtttg catcacacaa gacggcactg
      361 tatatcgata cgatatacac tgtaagttaa ttgaacctaa tattagctta ggtcatgagt
      421 gttttgaaca tagtgttgtt gaatgtgtgt tttgggggaa tggtgttgtg tgtatgaatg
      481 aagtgtttga attgttttgt attcctgata tgaaaaaccc taaggcgtgt aagttagcgg
      541 ataccggaat tgatgagttt ccgttgtgta tgacggttat tgaaccgaag tatacgatgt
      601 ctggaaacgt tgaggtgttg ttaggtgttg gtgatcatgt gttgctagtg gaagaagatg
      661 gtgttcagag tgttggtgaa gggttgggac ctttgcagaa gatggtcgtt tcatgtaacg
      721 ggaaattgtt ggcgtcgttt actcacgacg gtcagttact tgtcatgcct actgatttct
      781 caagcatcat tttcgagtac gcttgcgagt ctgctcttgc tccagagcaa cttgtttggt
      841 gtggaatgga cagtgtgtta ctatattggg aagatatgct tctgatggtg ggtccctatg
      901 gagatcctgt tcgctacctt tatgatgaac caattgtcct aatcccagag tgtgatggag
      961 caaggatatt gtccaacaca aaaatggagt ttctacaacg ggtcccagct tccaccgagt
     1021 ccatctttaa gattggtagc acagaaccag cagctttatt gtatgatgca ttggatcatt
     1081 ttgatcgacg gagtgcaaag gctgatgaga atttgagact gatacgcgca tcactgcccg
     1141 aggctgtaga agcctgtgtg gacgctgcag gtcatgaatt tgatccttct ctacaacaga
     1201 cacttcttag ggctgcaagc tatggacaag cattttgtag ccaatttcag cgtgagagca
     1261 ttcaggagat gagcaaaaca ttgcgggtct taaatgctgt acgcagcccg gagactggca
     1321 ttccacttag tatacatcaa tacaagttgc ttacaccatc agttttgatt ggtcgattgg
     1381 ttaatgccca ccaacatctg ctggcactca ggatatcaga ataccttgga atgaatcaag
     1441 aagtggttat catgcattgg gcttgttcaa agttaacagt gtcatcagca attcctgacg
     1501 caactctcct tgaaatttta cttgataagt taaagatgtc tagaagcatt tcgtatgctg
     1561 cagttgctgc tcatgcagat caaactggcc gccggaagtt agctgctatg cttgttgaac
     1621 atgaacctct ttcctcaaag caggttcctt tgttactcgg cataggagaa gaagatacgg
     1681 ccctgactaa ggcaactgaa agtggtgata cggatcttgt ttatcttgtt ctctttcaca
     1741 tatggcagaa gaggccagca ttggagttat tcggaatgat acaagctaga ccccttgcac
     1801 gggacttatt tatacgttat gcacgatgct atacacatga atttttgaag gatttctttc
     1861 tctctactgg tcagcttcat gatgttgctt tcttgttgtg gaaggaatct tgggaaatag
     1921 caaagaatcc aatggcaagt agaggatctc cacttcatgg tccgcgcata aaactcattg
     1981 agaaagcgca acatcttttt gctgaaacaa aggagcatct ttttgagtcc aaggctgctg
     2041 aagagcatgc aaaattatta cggatacagc atgaactaga agtaagtaca aagcagccta
     2101 tatttgttga ttcgagtatt agtgatacaa ttcggacatg tatagtattg ggcaatcatc
     2161 gagctgctct gaaagttaaa acggaattca aggtttcaga gaaacgatgg tattggctca
     2221 aagtttttgc cttggccacc attagggact gggatgcctt ggaaaagttt tcaaaggaga
     2281 aaaggccccc aattggtttt aggccatttg tggaggcttg cattgatgct gaagaaaaag
     2341 gtgaagcctt gaagtacatt accaagcttg cagatcctcg agaaagagca gaggcttatg
     2401 ctcgaatagg aatggcaaag gaagctgcag atgctgcatc acagactaaa gacggagagt
     2461 tgcttgagcg cctaaaaaac acgttacagc agaattcaac ggctacatcg atctttgata
     2521 ccctcaggga tcggctctcc ttccccggtg tttcgtaggt tgttatttcc ttttctttaa
     2581 agtgatcaaa ttgtcaataa aagtgataat tttttttgtg aaaatttgtt gtataaacaa
     2641 actaatttat gttgtgaact ttcccttgag t
//
LOCUS       XM_071829488             354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839424), mRNA.
ACCESSION   XM_071829488
VERSION     XM_071829488.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..354
                     /gene="LOC139839424"
                     /note="uncharacterized LOC139839424; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839424"
     CDS             1..354
                     /gene="LOC139839424"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685589.1"
                     /db_xref="GeneID:139839424"
                     /translation="MQKYLKLADELANKFDSFSITQVPQSMNKKADTLSKLASLTFSP
                     FAKDVWVEFVDQKSTDVVQVAAPVEEVNTWMNPIVDYLKDGTLPADSITARKVRMKAP
                     MYVLRDGVLYKKSFL"
     misc_feature    <1..117
                     /gene="LOC139839424"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgcaaaaat atctgaaatt ggcggacgag ctggccaaca aatttgactc tttttcaatc
       61 acgcaagtgc cgcagtcaat gaacaaaaag gctgacaccc tcagcaagct tgcttcgttg
      121 acgttcagcc ccttcgctaa ggacgtatgg gtggagttcg ttgaccaaaa atccaccgac
      181 gtggtacagg tggcggcacc agtcgaggag gtaaacactt ggatgaaccc aatcgtcgac
      241 tatctaaaag atggaacgtt acccgctgac agcataacgg ccaggaaagt tcgcatgaag
      301 gcccccatgt atgttctacg tgacggcgtg ctttacaaga agtcattctt gtga
//
LOCUS       XM_071829489            4119 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter B family
            member 1 (LOC139839425), mRNA.
ACCESSION   XM_071829489
VERSION     XM_071829489.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4119
                     /gene="LOC139839425"
                     /note="ABC transporter B family member 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139839425"
     CDS             51..3926
                     /gene="LOC139839425"
                     /codon_start=1
                     /product="ABC transporter B family member 1"
                     /protein_id="XP_071685590.1"
                     /db_xref="GeneID:139839425"
                     /translation="MQSLELVSENPTETNMEMEGEKSKNAEKDKEISVGFGELFRFAD
                     RLDYVLMVIGTIGAFVHGCSLPIFLRFFADLVNSFGSNANNIDKMTHEVLKYAFYFLV
                     VGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALSQDIQFFDTEVRTSDVVSAINT
                     DAVLVQDAISEKLGNFIHYLATFVSGFVVGFTAVWQLALVTLAVVPLIAIIGAIHMTT
                     LAKLSSKSQEALSDAGNIAEQTIAQIRTVSAYVGESRALQAYSAALKISQKLGYKSGF
                     AKGLGLGATYFTVFCCYALLLWYGGYLVRHNYTNGGLAISTMFSVMIGGLALGQSAPS
                     MAAFTKARVAAAKIFRIIDHKPSVDRNCESGLELDSVSGQLELKNVDFAYPSRPDVKI
                     LNNFNLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVILDGHDIKGLNLKWLR
                     QQMGLVSQEPALFATTIKENILLGRPDASVGEIEEAARVSNAHSFIIKLPDAYDTQVG
                     ERGLQLSGGQKQRIAIARAMLKNPSILLLDEATSALDSESEKLVQEALDRFMIGRTTL
                     VIAHRLSTIRKADLVVVLQQGCVLEIGTHDELFAKGENGVYAKLIKMQEVAHETALNN
                     ARKSSARPSTARNSISSPIMTRNSSYGRSPYSRRLSDFSTSDFTLSIEGGYPNYRLEK
                     LPFKQQASSFLRLAKMNSPEWTYALIGSVGSVICGSISAFFAYVLSAVLSVYYNQDHE
                     YMIKEIGKYCYLLIGVSSAALIFNTLQHCFWDVVGENLTKRVREKMLAAVLKNEMAWF
                     DQEENESSRVAARLSLDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLV
                     AVFPVVVAATVLQKMFMQGFSGDLEGAHAKATQLAGEAVSNMRTVAAFNSESKIVKLY
                     TTSLDKPLRRCFWKGQIAGSGFGLAQFLLYASYALGLWYASWLVKHGISDFSKTIRVF
                     MVLMVSANGAAETLTLAPDFIKGGRAMNSVFDLLDRKTEIESDDPDSIPVPDRLRGEV
                     ELKHVDFAYPSRPDNLVFNGLCLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSAGR
                     VTIDGKDIRKYNLKSLRRHIAIVPQEPCLFATTIFENIAYGHELATEAEIIEAATLAN
                     AHKFISALPNGYKTFVGERGVQLSGGQKQRVAIARAFLRKAEIMLLDEATSALDAESE
                     KCIQEGLERVCSGKTTIVVAHRLSTIRNAHSIAVIDDGKVVEQGSHSQLLKNYVDGSY
                     AKMIQLQRFSHGHEAVSMTSSNGSSSSTM"
     misc_feature    195..1892
                     /gene="LOC139839425"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; Region: MdlB;
                     COG1132"
                     /db_xref="CDD:440747"
     misc_feature    198..3860
                     /gene="LOC139839425"
                     /note="multidrug resistance protein (mdr1); Provisional;
                     Region: PTZ00265"
                     /db_xref="CDD:240339"
     polyA_site      4119
                     /gene="LOC139839425"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actttcaagg gaagataaag agagacagag ggtagttcaa atgctataaa atgcaaagtc
       61 ttgaacttgt ttctgaaaac ccaactgaaa caaatatgga aatggaagga gaaaagagta
      121 aaaatgcaga gaaagataaa gagatatcag ttgggtttgg ggaattgttt aggtttgcag
      181 atagattaga ttatgtgttg atggtaattg gtacaattgg tgcctttgtt catggctgtt
      241 ctttgcctat ttttctcaga ttctttgctg atcttgttaa ttcatttggg tccaatgcta
      301 acaacattga taaaatgact catgaagtat taaagtatgc attttacttt cttgtagttg
      361 gtgctgcaat atgggcatct tcctgggcag agatatcatg ttggatgtgg acaggagaaa
      421 gacaatcaac aaaaatgagg atcaaatact tagaagcagc actgagtcaa gacatacagt
      481 tttttgacac tgaagttaga acttcagatg ttgtatctgc aatcaatact gatgctgttt
      541 tggttcaaga tgccattagt gaaaagttag gaaattttat tcactatctg gcaacatttg
      601 tttctggatt tgttgtggga ttcacagcag tttggcaatt agcactggtg acacttgctg
      661 tggtgccttt aattgctata attggagcta ttcatatgac cacattagct aaattgtctt
      721 ctaaaagcca agaagctctt tcagatgctg gaaatatagc tgagcagaca attgcacaaa
      781 ttcgaactgt ttcggcatac gttggtgaat caagagcatt acaagcttac tctgcagcat
      841 taaagatatc tcaaaagctt ggatacaaga gtggatttgc aaaaggatta ggattaggag
      901 caacttattt cactgtcttt tgttgttatg cacttctttt atggtatgga ggctatcttg
      961 ttaggcacaa ttacacaaat ggaggacttg caatttctac aatgttttct gtcatgattg
     1021 gaggacttgc tttaggccag tctgctccaa gtatggcagc atttacgaaa gcacgggtgg
     1081 cggcagctaa aatattcaga ataatcgatc ataaaccgag cgttgacaga aactgtgaat
     1141 caggtttgga gttggattct gtttcgggtc aactagagtt gaaaaatgtt gactttgcat
     1201 atccttcaag accagatgtc aaaatactaa acaatttcaa tttaagtgtt cctgctggaa
     1261 aaaccattgc tcttgttgga agcagtggtt cggggaaatc tacggttgtt tcactcatcg
     1321 aaaggtttta tgatccgacg tcaggtcaag taatccttga tgggcatgat atcaaaggac
     1381 tgaatttgaa atggttaagg caacaaatgg gtctcgttag tcaagagccc gccctttttg
     1441 caaccactat caaagaaaac atacttttgg gtcgacccga tgcgtccgtg ggtgagattg
     1501 aagaagctgc ccgtgtctcc aacgctcatt cgttcatcat taagttaccc gacgcctacg
     1561 atactcaggt tggggagagg ggattacaac tttcgggcgg acaaaagcaa agaatcgcga
     1621 tagcacgagc aatgttaaag aacccttcga tcttgctttt agacgaggct acaagtgcat
     1681 tagattcaga atcggaaaaa ttagtacaag aggcgttaga taggtttatg atcgggagaa
     1741 cgactcttgt gatagcccac cgcctttcaa ccatacgcaa ggcggatctc gtggttgttt
     1801 tgcaacaagg ttgtgttttg gagatcggga ctcacgatga acttttcgcc aaaggagaaa
     1861 acggtgtgta cgctaagctt ataaagatgc aagaagttgc tcatgaaact gccttgaaca
     1921 atgccagaaa aagcagtgca aggccttcca ctgcaagaaa ctcgattagt tcaccgataa
     1981 tgacacgaaa ctcatcttat gggcggtccc catactctcg acgtttatct gatttctcga
     2041 catcagactt tactttatca attgaaggag gatacccaaa ttaccggctc gaaaagctgc
     2101 ctttcaaaca gcaagcaagt tcctttttgc gcctggcaaa aatgaactcg cccgaatgga
     2161 catatgcttt aatcgggtca gtgggttcag ttatttgtgg ctcaatcagt gctttttttg
     2221 catatgttct cagtgctgtt ttgagtgttt actacaacca agatcacgaa tacatgatta
     2281 aagaaatcgg taaatactgt tatctgttga ttggagtttc gtcagctgct ctaattttta
     2341 acacactaca acattgtttt tgggatgttg ttggagaaaa cttgactaaa cgggttcggg
     2401 agaaaatgct ggctgcggtt ttgaaaaacg aaatggcgtg gttcgatcaa gaagaaaacg
     2461 aaagctcgag agttgcggct aggttgtcgc ttgatgcgaa caatgtacgg tcagcaattg
     2521 gtgaccgaat ttcggtaatc atgcagaatt cggctttaat gttggttgct tgcacagcag
     2581 gttttgttct tcaatggcgt cttgcacttg ttcttgttgc tgtttttcct gtagtggtag
     2641 cagcaactgt tttgcagaaa atgtttatgc aaggattttc gggcgactta gaaggtgcac
     2701 acgcgaaggc tacacagtta gctggagagg cggtttcgaa tatgagaacg gtagccgcgt
     2761 tcaactcgga gtcgaaaatc gttaaacttt atacaacgag tctcgataag cctcttcgaa
     2821 gatgcttttg gaagggacag atagccggaa gtgggttcgg gttggctcag tttttgctct
     2881 atgcatctta tgcgctcggg ctttggtatg cgtcgtggct cgttaagcac gggatatcgg
     2941 atttctcgaa aaccattcgg gtgtttatgg ttctcatggt ttcagctaat ggtgcagccg
     3001 aaaccctaac cctagctcct gatttcatca aaggtggtcg ggccatgaat tcggttttcg
     3061 atcttcttga ccgcaaaacc gagatcgagt cagatgaccc tgactcgatc cccgtccccg
     3121 accgcctccg aggagaagtt gaactaaaac acgttgattt cgcttaccca tctcgtcccg
     3181 ataatttggt ctttaacggg ctttgcctac gggcccgggc cggaaagaca ctagcattag
     3241 tgggcccgag tggatgtgga aaaagctcgg tcattgcact cgtacaacga ttctacgaac
     3301 cgtctgcagg gcgtgtaacg atagacggta aagatatccg aaaatataac ctaaagtccc
     3361 tccgccgcca tatcgccata gtcccgcaag aaccgtgcct tttcgcaacc acgatcttcg
     3421 aaaacatagc gtatgggcac gagttagcaa ccgaagcaga gatcattgaa gctgcaaccc
     3481 tcgcaaacgc tcacaagttt atatccgcct taccgaacgg atacaaaaca tttgtgggcg
     3541 aacgaggggt gcaactctca ggcggacaaa agcaacgtgt ggcaatcgca agagcctttt
     3601 taaggaaagc tgagatcatg ttactagacg aggcgacaag tgcactagac gcagaatctg
     3661 aaaaatgcat tcaagaggga ctcgaacgtg tttgttcagg aaaaacgacg atagttgtag
     3721 cacatagact atcaacgata cgcaatgctc atagcattgc ggttattgat gatggtaaag
     3781 tagtggaaca aggctcgcat tcgcagttat taaaaaacta tgtggatggt agttacgcga
     3841 agatgattca gttacaacgg ttctcacatg gtcatgaagc cgtaagcatg acgtcatcga
     3901 atggttcgag ttcatcgact atgtaattgg ttttgaatat tttgtgtttt tgattttggg
     3961 agtgtaactt gaatgtatgt tggtaagttt tagttgtcta gtttatattg tttatggtaa
     4021 agtttcaaag taaccaatgt acttatcaaa atttaaacaa aaaatgacct tagtaagttt
     4081 atcttggata caagaaatac aattgttgaa gtttattaa
//
LOCUS       XM_071829490            2060 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides delta(24)-sterol
            reductase-like (LOC139839426), mRNA.
ACCESSION   XM_071829490
VERSION     XM_071829490.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2060
                     /gene="LOC139839426"
                     /note="delta(24)-sterol reductase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139839426"
     CDS             153..1856
                     /gene="LOC139839426"
                     /codon_start=1
                     /product="delta(24)-sterol reductase-like"
                     /protein_id="XP_071685591.1"
                     /db_xref="GeneID:139839426"
                     /translation="MADVEAPLITREKRKKVWVDYFVQFRWIIVIFVVLPISFTLYFL
                     TYLGDVWSSWKSYEKRQKEHEENVKKVQKRLLERDPQKDGLVCTARKPWIAVGMRNVD
                     YKRARHFEVDLSAFRNILEIDTERMIAKCEPLVNMGQITRATCPLNLALAVVAELDDL
                     TVGGLINGYGIEGSSHLYGLFSDTVVAYEIVLSKGQVVRATKDNEYSDLFYAIPWSQG
                     TLGLLVSAEIKLIPIKEYMKLTYKPVRGNVRDLAQGYIDSFAPGFGDECSDQVPDFVE
                     TMIYNPHEGVCMTGSYASKEEAKMKGNTINSVGWWFKPWFYQHAQTALKKGEFVEYIP
                     TREYYHRHTRCLYWEGKLILPFGDQWWFRYLFGWLMPPKVSLLKATQGEAIRNYYHEM
                     HVIQDMLVPLYKVPDALEWVDREMEIYPLWLCPHRLYKLPVKTMIYPEPGFEQERRPG
                     DTEYAQMYTDVGVYYTPGPVFRGEVFDGVKAVQKLETWLIENHGFQPQYAVSELDEKK
                     FWKMFDAGLYEQCRNKYEAVGTFMSVYYKCKKGKKTEKEVQEAEKAQLETACAEVDQA
                     E"
     misc_feature    477..>1412
                     /gene="LOC139839426"
                     /note="sugar 1,4-lactone oxidases; Region: FAD_lactone_ox;
                     TIGR01678"
                     /db_xref="CDD:273751"
     misc_feature    483..>851
                     /gene="LOC139839426"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; Region: GlcD;
                     COG0277"
                     /db_xref="CDD:440046"
     polyA_site      2060
                     /gene="LOC139839426"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atataatccc atcttcttct ctaaagccgt cccaataatt cactcactgc ttttagcagg
       61 tcaatttcct ccataagatc cgacccgtat ccttctcggg tctcccctgc atttctgatc
      121 catccttcgg atttggatcg taatattctg taatggcgga cgttgaggct ccattaataa
      181 caagggaaaa aaggaagaag gtgtgggttg actactttgt tcagtttaga tggattatag
      241 ttatctttgt ggtgcttccc atatctttca ctctctattt cctcacgtat cttggggacg
      301 tttggtcgag ttggaagtcg tacgagaaac gccaaaagga acacgaagaa aacgtcaaga
      361 aagttcagaa acgtctctta gaaagggacc cacaaaaaga tggtctcgta tgtacagccc
      421 gcaagccctg gattgcagtt ggaatgagga acgttgacta taaacgggct cgtcattttg
      481 aagttgacct ttcggctttc cgcaacattc ttgaaattga cacagaaaga atgattgcta
      541 aatgtgagcc attggtcaat atgggtcaga tcacacgagc cacttgtcct ttgaatcttg
      601 ctttagctgt tgtagctgag ctcgatgatc taaccgttgg tgggctcata aacggctatg
      661 gtatcgaagg aagctcccac ttatatggtc ttttctctga taccgtcgtg gcttatgaga
      721 ttgttctatc taaaggtcaa gtggttcgag ccacaaaaga caacgagtac tctgatcttt
      781 tttacgccat cccatggtcc caagggacac ttgggttact tgtgtctgcc gagattaagc
      841 ttattccgat taaagaatat atgaaattga catacaaacc ggttagggga aatgttagag
      901 atcttgcaca aggctatatc gactcttttg cccctggatt tggtgacgaa tgtagtgacc
      961 aagttcccga ctttgtcgaa accatgatat acaatcctca tgagggtgtt tgtatgacgg
     1021 gaagctacgc ctctaaagaa gaggctaaga tgaaagggaa tacgatcaat agtgtcgggt
     1081 ggtggttcaa gccatggttc tatcaacatg ctcaaacggc tttgaaaaaa ggcgagtttg
     1141 tggagtacat accaactaga gagtattatc atcgacacac tcggtgtttg tattgggaag
     1201 ggaagcttat tcttccgttt ggtgatcaat ggtggtttag atatttgttt ggttggttga
     1261 tgccgccaaa ggtttcgctt cttaaggcta cacaaggtga agccattcga aactattatc
     1321 atgaaatgca cgtgattcaa gacatgctcg ttccacttta taaggtcccc gatgccctag
     1381 aatgggttga tcgtgaaatg gagatatatc ctctttggtt atgcccacac aggctttaca
     1441 agcttcctgt taagacaatg atatacccag agccagggtt tgagcaagaa cgcaggccag
     1501 gtgacactga atacgcacaa atgtacacag atgtcggcgt ttattacaca ccgggacccg
     1561 tgtttagggg cgaagtcttt gatggggtta aggcggttca aaagttggaa acttggttga
     1621 ttgagaacca tgggtttcag ccacaatacg ctgtttctga actcgatgag aagaagtttt
     1681 ggaagatgtt tgatgcaggg ctttatgagc agtgtcgtaa taagtatgag gctgtaggga
     1741 cgtttatgag cgtgtattac aagtgtaaga aaggtaagaa gactgagaag gaagttcaag
     1801 aagctgagaa agcgcagttg gagacggctt gtgctgaagt tgatcaggcg gaatagattg
     1861 ttaggtttga ggatttggga cttttttcat gatgtttaga ttttgttttc ggcttgtggt
     1921 tgttgcttcg tgtttcttgt tgtttgttgt ttgaatttta ggtgttgatt gcatctgaac
     1981 ctttttacat aaattggttt ctctagtatc agaaatagaa cttgggttca tttgattgtt
     2041 agtttactga tgcaccttca
//
LOCUS       XM_071829491            2118 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative cyclic
            nucleotide-gated ion channel 8 (LOC139839427), mRNA.
ACCESSION   XM_071829491
VERSION     XM_071829491.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2118
                     /gene="LOC139839427"
                     /note="putative cyclic nucleotide-gated ion channel 8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 55 Proteins"
                     /db_xref="GeneID:139839427"
     CDS             1..2118
                     /gene="LOC139839427"
                     /codon_start=1
                     /product="putative cyclic nucleotide-gated ion channel 8"
                     /protein_id="XP_071685592.1"
                     /db_xref="GeneID:139839427"
                     /translation="MMKRCGFNIEGANNTVPPRPTASKSIKLGMRRGSEGLINFGQSL
                     KTGVTRAVFSEDLKVSEKKIIDPQDKNLLIWNKLLVLSCILAVYVDPLFFYIPVYHNK
                     ERCLKIHKSLAHSITTVRTIVDIFYLVRIGLQFRTAYIAPSSRVFGRGELVIDPAQIA
                     RRYMQRYFVVDLLSVLPLPQIVVWRFFHQSHGSGVLGTKNILLWIVIVQYIPRSVRIL
                     PLFSELKKTVGVITETAWAGAVYYLVWFVLAGHIFGAFWYMLAVERKSSCWEQACIKE
                     GKCEIEYLYCGHEKTDGYKAWAEVSKTTLDEHCVENEAYGEFDYGIYLQAVQSQVDSS
                     EHFISKYCYCLWWGLRNLSTLGQGLETSTYAKEIIFSIIIAISGLILFALLIGNMQTY
                     LQSLSVRLEEMRIKRRDSEQWMHHRLLPQELKERVRRYDQYKWLETRGVDEESLVQSL
                     PKDLRRDIKRHLCLNLVKRVPLFANMDERLLDAICERLKPSLYTETTYVLREGDPVDE
                     MLFIIRGRLESVTTDGGRSGFFNRGFLKEGDFCGEELLTWALDPKSASNLPPSTRTVK
                     ALTEVEAFALIADEVKFITSQFRRLHSRQVQHTFRFYSQQWRTWAASFIQAAWRRYSR
                     RKLLELNREEEDEENDYDDDNEDDEINEESALIKGRASSFGATMYASRFAANAMKRMQ
                     RKRGVSTGFISLQKPSEPDFNVD"
     misc_feature    178..>1629
                     /gene="LOC139839427"
                     /note="Voltage-dependent potassium channel; Provisional;
                     Region: PLN03192"
                     /db_xref="CDD:215625"
     misc_feature    1414..1809
                     /gene="LOC139839427"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
                     cd00038"
                     /db_xref="CDD:237999"
     misc_feature    order(1624..1629,1681..1689)
                     /gene="LOC139839427"
                     /note="ligand binding site [chemical binding]; other site"
                     /db_xref="CDD:237999"
     misc_feature    order(1768..1776,1786..1794)
                     /gene="LOC139839427"
                     /note="flexible hinge region; other site"
                     /db_xref="CDD:237999"
ORIGIN      
        1 atgatgaaga ggtgtgggtt caatatagaa ggagcgaaca atactgttcc tcctcgtcca
       61 actgcatcca agtcgataaa gttaggaatg agacgagggt ccgaagggct aataaatttt
      121 ggtcaaagtt taaaaaccgg agtcacacgt gcagttttct ccgaagatct gaaagtgtcg
      181 gagaaaaaaa taatcgatcc gcaagacaag aatcttttga tatggaacaa gcttttggtg
      241 ttatcttgca ttcttgcagt atatgtagat cctttgttct tttatatccc tgtttatcat
      301 aataaagaaa gatgcttaaa aatacacaaa agtttagcac attcaattac aactgtgagg
      361 actatagttg atattttcta ccttgttcgt atcggtctcc agtttcgtac agcatatatt
      421 gcaccgtcat ctcgagtttt cggacgtggt gaacttgtta ttgatcctgc tcaaatagca
      481 aggcgttata tgcaacgtta ttttgtagtt gaccttctat ctgtgctacc tttaccacag
      541 attgtggtgt ggaggttttt tcatcagtcg catggttcgg gtgtgttggg tacaaaaaat
      601 attttactgt ggattgtgat cgtacaatac attcctagat ccgttcgtat cttaccgcta
      661 ttttcagagc ttaaaaagac tgttggtgtc attactgaaa cagcttgggc tggtgcagtg
      721 tattatttag tttggtttgt tcttgctggt cacatttttg gggcgttctg gtatatgtta
      781 gcggtagaac gtaaaagttc ttgttgggag caagcttgta taaaggaagg taaatgtgaa
      841 atagagtatc tgtattgtgg acatgaaaaa acagatgggt ataaagcttg ggcggaagtt
      901 agtaagacga cactcgatga acactgtgtt gaaaacgagg cgtatggaga attcgattat
      961 gggatttact tacaagcggt gcaatcgcaa gttgattcat ctgaacattt tatatctaaa
     1021 tactgctatt gtttgtggtg gggcttaaga aacttgagta cactcggcca gggactcgaa
     1081 accagcacct atgctaaaga gataatattc tcaatcataa tcgcaatttc tgggctcatt
     1141 ttatttgccc ttcttattgg caacatgcag acttatctcc aatcactttc ggttcgtttg
     1201 gaggagatga ggataaaaag gcgagattcg gaacaatgga tgcatcatag gttacttcct
     1261 caagaactaa aagaaagagt acgtcgatat gatcaataca aatggttgga aacaagaggt
     1321 gtggatgaag agagtttggt tcagagtcta ccaaaagatc tcaggaggga tattaaaaga
     1381 cacctttgtt tgaatttagt taaaagggtg ccactgtttg caaatatgga tgaacgatta
     1441 ctagacgcta tatgtgagcg tcttaagccg agtctgtaca cagaaacgac atacgtatta
     1501 agagaagggg accctgttga cgaaatgctg ttcatcatcc gtggcagatt agaaagtgtc
     1561 acaacagatg gtggcagaag cgggttcttc aatcgcggtt tcttaaaaga aggcgatttt
     1621 tgtggtgaag agcttttaac gtgggcccta gacccaaaat cagcatctaa cttaccacca
     1681 tcaacccgaa ctgtaaaagc attaacagaa gttgaagctt ttgcgttaat tgcagatgaa
     1741 gtcaaattta ttacaagtca gttcagaaga cttcatagtc gacaagtgca acacacgttt
     1801 agattttatt cgcagcaatg gaggacgtgg gccgcgagct ttatacaagc tgcgtggagg
     1861 aggtattcca gaaggaagct tctagaactt aaccgagaag aagaagatga agaaaatgat
     1921 tatgatgatg acaatgaaga tgatgagatt aatgaagaaa gtgcgttgat taaaggacgt
     1981 gcatcgtcat ttggtgcaac aatgtatgca tcaaggtttg ctgctaatgc tatgaaacga
     2041 atgcagagga aacgtggtgt gtcgacaggg tttataagtc ttcaaaagcc ttcagagcct
     2101 gattttaatg ttgattga
//
LOCUS       XR_011756947             262 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839428), ncRNA.
ACCESSION   XR_011756947
VERSION     XR_011756947.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..262
                     /gene="LOC139839428"
                     /note="uncharacterized LOC139839428; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839428"
     ncRNA           1..262
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839428"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839428"
ORIGIN      
        1 aacactggat tacatggtca gaaagtttgt ggaaagatac agcatggtta aacaacaagg
       61 cctttctaat cgtcacctgc ctgaattaac agtacattcg agaagttata tgatcattga
      121 aaacctaata ttattacata tgtttgaata aatgcttctg tgattgatta tgtgacgtgg
      181 ttgttttttt aggtacaaag cacctgagat gattgtggtt caatatggtg gccttagccg
      241 cgaaggagag caataatcga ca
//
LOCUS       XM_071829492             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 21 kDa protein-like
            (LOC139839429), mRNA.
ACCESSION   XM_071829492
VERSION     XM_071829492.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139839429"
                     /note="21 kDa protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839429"
     CDS             1..555
                     /gene="LOC139839429"
                     /codon_start=1
                     /product="21 kDa protein-like"
                     /protein_id="XP_071685593.1"
                     /db_xref="GeneID:139839429"
                     /translation="MCQTVLALLIFSLAISPTRSHKNFIHKSCNTTLYPQLCSLYLSR
                     FTTRIGTSPRLLAQTALAATLSTTRTTTTKLINYSKNHKLSKRERAAMKDCLEEIEDS
                     AYELHLSMVEMGKVRSGPDFSFNMNSIETWVSAALTDDDTCSDGFSDKSMNPGVKNMV
                     RRHVLNIAHLASIALAFVNNFANV"
     misc_feature    82..549
                     /gene="LOC139839429"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; Region: PMEI-like_3;
                     cd15798"
                     /db_xref="CDD:275442"
     misc_feature    order(289..294,301..303,313..315,388..390,424..426,
                     535..537)
                     /gene="LOC139839429"
                     /note="putative heterodimer interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:275442"
ORIGIN      
        1 atgtgtcaaa ctgtcttagc attactcata ttcagcttag ccataagccc aacaagatcc
       61 cataaaaatt tcatccataa atcatgcaac accacactgt accctcagct ttgttcattg
      121 tacctctcaa gattcacaac ccgaatcgga acaagtccaa gacttttagc ccaaaccgca
      181 ctagccgcaa cactcagcac cacacgcaca actacaacaa aactgatcaa ttattcgaaa
      241 aaccacaaat tgtcgaaaag agaaagggct gcaatgaaag attgccttga ggagatcgag
      301 gattcggctt atgagctcca tttgtccatg gtagaaatgg gtaaagtccg atctggaccc
      361 gatttctcgt ttaacatgaa tagtattgaa acgtgggtta gtgcagcgtt aactgatgat
      421 gacacgtgta gtgatggttt ttcggataaa agtatgaatc caggggtcaa aaacatggtt
      481 cgtagacatg ttttgaacat tgctcatttg gctagtatcg ctctggcttt cgttaacaac
      541 tttgcaaatg tataaatcgc tagaaacgcg attgaaagtt atattattac attgtacggt
      601 acg
//
LOCUS       XR_011756948             356 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839430), ncRNA.
ACCESSION   XR_011756948
VERSION     XR_011756948.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..356
                     /gene="LOC139839430"
                     /note="uncharacterized LOC139839430; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839430"
     ncRNA           1..356
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839430"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839430"
ORIGIN      
        1 gctgaaagta aaccaaggca acaaaatcaa tttggcccga acttgacctt ttcataaata
       61 aatgggtcca aattgccaca tctaggtatc gaaaagctat agagatacgg aaagctatag
      121 agatatatga agagattgca cgacaatctc tcaacaataa cttgctaaaa tatggtgtta
      181 gagcatatct acttaatgct ggtattccaa ccacaaatgc tttggaacgt tatcaggtag
      241 tgtttcggga ttgagaagat cgcatgatga gttgggtact tatgcctcaa gatttcgttg
      301 ctttttatta attctcactt gttacatact tatgtgtatt gctatttgaa agagaa
//
LOCUS       XM_071829493             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839431), mRNA.
ACCESSION   XM_071829493
VERSION     XM_071829493.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139839431"
                     /note="uncharacterized LOC139839431; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839431"
     CDS             1..525
                     /gene="LOC139839431"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685594.1"
                     /db_xref="GeneID:139839431"
                     /translation="MSGSKTNTNTIIDISSPYFLTPADQPGQNFVGDNLLKDGNYSDW
                     KSEMTNALFAKNKFGFVDGTIPMLAEGSNDLINCKRCNAMVQGWLISSMDREIKNSVK
                     YAVTSRDIWLDLEERFGKENAPRAYELRRTLTMTRQESQTISAYYTKLRGIWDEIQSV
                     NPIPMCKCNGCTCD"
     misc_feature    64..198
                     /gene="LOC139839431"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    256..>480
                     /gene="LOC139839431"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcaggaa gcaaaacaaa cacaaatacc atcatcgata tatcatctcc ttactttctc
       61 acacctgcag accagccagg tcaaaacttt gttggagaca accttctcaa agatggcaac
      121 tacagtgatt ggaaaagtga gatgacgaat gctttattcg ccaaaaacaa gtttggtttt
      181 gttgatggaa caatccctat gctagctgaa ggatccaatg atttaataaa ttgtaaaaga
      241 tgcaatgcga tggtacaggg atggcttata agttccatgg acagggagat caaaaacagt
      301 gtaaagtatg cagtcacttc acgagacatc tggttggatc tagaagagcg attcggtaaa
      361 gaaaatgctc ctagagcata tgaacttcga agaactctta ccatgacccg acaagaaagc
      421 caaaccattt cagcctatta caccaagtta agaggaattt gggatgaaat tcaatctgta
      481 aatccaatac caatgtgcaa gtgtaacggg tgcacatgtg attag
//
LOCUS       XM_071829494             366 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thionin-like protein 2
            (LOC139839432), mRNA.
ACCESSION   XM_071829494
VERSION     XM_071829494.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..366
                     /gene="LOC139839432"
                     /note="thionin-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839432"
     CDS             1..366
                     /gene="LOC139839432"
                     /codon_start=1
                     /product="thionin-like protein 2"
                     /protein_id="XP_071685595.1"
                     /db_xref="GeneID:139839432"
                     /translation="MEMKGYLKFVVVMGMVVSGCRGDVNTFRDCYAKCFIFCMIEPNK
                     SLCTCTTQCLKECIFPSPSVTMAIDSHTQNLGYCKLGCATSLCSNISKAHNPDGKNVE
                     SCVGSCSNKCTMSYSASTP"
ORIGIN      
        1 atggagatga agggatattt gaagtttgta gtggtgatgg ggatggtagt gagtgggtgc
       61 aggggtgatg tgaatacatt cagggattgt tatgccaaat gtttcatttt ctgcatgatt
      121 gaacccaaca aaagtctttg cacttgtact actcaatgtc ttaaagaatg catctttcca
      181 tctccatctg tcaccatggc cattgattca catactcaaa accttggtta ctgcaagctt
      241 ggttgtgcca cttcactctg ttctaacatc agcaaagcac acaatcccga tggaaagaat
      301 gtggagagct gtgttggatc atgttcaaac aagtgcacta tgagctactc agcttcaaca
      361 ccttaa
//
LOCUS       XM_071829495            1345 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tetraspanin-3-like
            (LOC139839433), mRNA.
ACCESSION   XM_071829495
VERSION     XM_071829495.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1345
                     /gene="LOC139839433"
                     /note="tetraspanin-3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839433"
     CDS             254..1114
                     /gene="LOC139839433"
                     /codon_start=1
                     /product="tetraspanin-3-like"
                     /protein_id="XP_071685596.1"
                     /db_xref="GeneID:139839433"
                     /translation="MRTSNHLIGMLNFLTFLLSIPILGGGIWLSTRANNTDCLTFLQW
                     PLIVIGVAIMVVSLAGFAGACYRNTFLMYLYLWAMFFIIAVLLGFVIFAYVVTDKGSG
                     RPVMNRAYEDYYLPDFSGWLKDRVASDEYWRKISSCVHDSGVCKKTGRVIGGFPESAD
                     MYYQRKLAPIESGCCKPPTECGYTYINETTWNPVDSTLAVNNRDCNRWSNDQEQLCYS
                     CNSCKAGVLANVRKSWRKVSIINIVVLIILVIAYVIAIAAFRNNKRMDNDEPYGETRM
                     EKARPSWIRF"
     misc_feature    263..>691
                     /gene="LOC139839433"
                     /note="Tetraspanin family; Region: Tetraspanin; pfam00335"
                     /db_xref="CDD:459767"
ORIGIN      
        1 tcaataatct ttagtcgaca tgttaataca cgtgtacaaa taatcttgat gaaccccaat
       61 ttagtcattt cacaagacac atctttcata ctacactatt tcatctttga ttctttgtac
      121 tcttccctcc cttcaaacac acacacagca gacaaacata cataccacat acatctcatc
      181 acatgtaacc aaaccaacct tcaaacataa caaaaacatc caattccaca aacactaaat
      241 aaacacaaca atcatgagaa caagtaatca cttaatagga atgttgaatt tcttaacatt
      301 cctactatca attccgattc ttggtggtgg aatttggtta agcacacgcg caaacaacac
      361 cgattgctta acctttttac aatggccgtt aattgttatc ggagttgcga tcatggtagt
      421 ctcactcgcg gggttcgccg gcgcgtgtta ccggaatact tttcttatgt atttatatct
      481 ttgggctatg ttttttatta tcgctgtgtt acttgggttt gttatatttg cttacgtggt
      541 aacggataaa gggtcgggtc gacccgttat gaaccgtgcg tatgaggact attatttgcc
      601 tgacttttcg ggttggttga aggatcgggt cgcgagtgac gagtattgga ggaagattag
      661 ttcgtgtgtt catgattcgg gtgtttgtaa gaaaacgggt cgggttattg gtgggtttcc
      721 agagtctgct gatatgtatt atcaacggaa acttgctcct attgagtctg gatgttgcaa
      781 gccaccaact gaatgtgggt atacatatat aaacgagacg acatggaacc cagttgattc
      841 aactttggcg gtgaacaatc gtgactgtaa ccgttggagc aatgaccaag agcaattgtg
      901 ctatagttgt aactcgtgca aggctggggt gttggctaat gtcagaaaga gttggcgaaa
      961 agtgtctata atcaacattg ttgttctcat cattttagtt attgcatatg ttattgcaat
     1021 tgccgctttt aggaacaata agaggatgga taatgacgaa ccatatggag agacccgaat
     1081 ggagaaagca cgcccaagct ggatacggtt ttagttgctc ttaaaaggaa attcagacac
     1141 tctactttcc tttttttctt taggtttttg aagggttgtg atggaagttg aaagtacata
     1201 tagtatttgc atatttcttt gtaacatttt gtgttttgtc tcccgtttat caatttagta
     1261 accgaaatta caaggagtgc cttttgaaaa taacatctgt atatgtgtat accttttttt
     1321 tgaatgaatg aatgaaaacg taatg
//
LOCUS       XM_071829496             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839434), mRNA.
ACCESSION   XM_071829496
VERSION     XM_071829496.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139839434"
                     /note="uncharacterized LOC139839434; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839434"
     CDS             1..501
                     /gene="LOC139839434"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685597.1"
                     /db_xref="GeneID:139839434"
                     /translation="MFDSSKIHPAVTVNNIKNFIPITLEMEKSQYSFWSGLFKNHCRA
                     YEVLEHIISATSDDSSSTNPPTPPPTRTTSWGLLDAIILQWIYGTISLDLLRTVYKED
                     STAQQAWDHLKGLFQDNKNSHHVHLQHQFVNTSLENFPDASSYCQELKILADQIGTVG
                     PTVEED"
     misc_feature    253..>498
                     /gene="LOC139839434"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtttgatt cctcaaaaat tcaccctgct gttacagtca ataacatcaa aaatttcata
       61 cccataaccc tagagatgga gaaaagccaa tactcatttt ggtctggtct tttcaagaac
      121 cattgtcgag catacgaagt tcttgaacac attatttcgg caacctctga tgattcctct
      181 tccaccaatc cacccacccc accacctaca cgcactactt cttggggact attagatgca
      241 atcattctcc aatggattta cggtacaata tctcttgatc ttctgcgtac cgtttataaa
      301 gaggattcca ccgctcaaca agcttgggat catttaaaag gactttttca agataataag
      361 aactctcatc atgttcatct tcaacaccaa ttcgtcaata ctagcctcga aaattttcca
      421 gatgcttcat cttactgcca ggagctcaag atacttgctg accaaattgg tacagtcgga
      481 ccgactgttg aagaagactg a
//
LOCUS       XM_071829497             966 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839435), mRNA.
ACCESSION   XM_071829497
VERSION     XM_071829497.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139839435"
                     /note="uncharacterized LOC139839435; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139839435"
     CDS             1..966
                     /gene="LOC139839435"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685598.1"
                     /db_xref="GeneID:139839435"
                     /translation="MDKGKQVEKEYEMFNYVMKSDSDDEEAVKFIKLAYESEALVEYQ
                     REKIPRIYIHRDRGGAAERLWNDYFSETPTCPPKKIKRRFRMRCQLFMRIVGDITQIT
                     SAIRQLAYGAAPYSLDEYLQMSETSSFTCLENFCHCVIDLYGREYLRDPNATDIARLY
                     SVHEEKHSFRGMLGSIDCMHWQWENCPNAWKGQYTRGDRKGPTVMLEAVASHDMWIWH
                     AFFGMAGSNNDINVLNNSSLFYSLKNGSAPPASFYVNGHQYTKGYYLADGIYPDWATL
                     IKGYSQPTDEKRVKFKRFQESARKDVERTFGVLQGRFAILKCPAR"
     misc_feature    436..963
                     /gene="LOC139839435"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataaag gaaaacaagt tgaaaaagag tacgaaatgt ttaattacgt aatgaaatcg
       61 gattcggatg atgaagaagc cgttaaattt ataaaacttg catacgaatc cgaagcgtta
      121 gtcgagtatc aaagagaaaa aataccacga atttatattc atagagatcg aggaggtgct
      181 gcggaacgtt tatggaatga ttatttttca gaaacaccaa cttgtccccc gaaaaaaatc
      241 aaacgccgtt ttcgcatgcg ttgtcaatta ttcatgcgaa tcgtaggtga tataactcag
      301 attacatcag ccatacgtca attggcgtat ggtgctgcac catattctct agatgagtat
      361 ttgcaaatga gtgaaacctc atcttttaca tgtcttgaaa atttttgtca ttgtgtcatt
      421 gatttatatg gtagagagta tttgagggat ccaaatgcaa ctgacatagc acgtttatat
      481 agtgttcacg aagaaaaaca tagttttagg gggatgttgg gtagtattga ctgcatgcac
      541 tggcaatggg aaaattgtcc aaatgcgtgg aaagggcaat acactagggg tgaccgaaaa
      601 gggccaacgg tcatgctcga agcggttgct tcacatgata tgtggatttg gcatgcgttt
      661 tttggtatgg cgggttcaaa taatgatatt aatgttttaa ataattcttc tcttttttat
      721 tcacttaaaa atggatccgc gccacctgca tcattttatg taaatggtca ccagtacaca
      781 aaagggtatt atcttgcgga tggtatatat ccggattggg caacccttat taaaggatat
      841 tcacaaccaa cggatgaaaa acgtgtgaag ttcaaaaggt ttcaagaaag tgctcgcaaa
      901 gatgttgaaa gaacatttgg tgttcttcaa ggtagatttg ctattttgaa atgcccggcc
      961 cgataa
//
LOCUS       XM_071829498            2415 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides factor of DNA methylation
            1-like (LOC139839436), mRNA.
ACCESSION   XM_071829498
VERSION     XM_071829498.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2415
                     /gene="LOC139839436"
                     /note="factor of DNA methylation 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139839436"
     CDS             158..2050
                     /gene="LOC139839436"
                     /codon_start=1
                     /product="factor of DNA methylation 1-like"
                     /protein_id="XP_071685599.1"
                     /db_xref="GeneID:139839436"
                     /translation="MDYSSGDDSDISDSDINEYKDKPYQELKNGTLKVKFPNNILRCP
                     FCAGKKKQNFKYKDLHQHATGVGKGSSNRSAKQKANHQALALYLENELANEAEVPLKV
                     APPKPAAPVSEENDLFAWPWTGLVVNIIKEVEDVENSSYWMNRFSKYKPVGVEILWDD
                     QKQTAQALVSFNNDWTGFKNAMEFEKFFEASHHSSKEWVASESHSGIYAWLARANDFK
                     ELQGPVGEYLRRNRKLRTISDIVQEATNTRNKAVVELASEIDMRNENLDDLQVKYNQK
                     TMSLSRMLEEKDSLHVAFYEETKKMQRIARDHVKRVLDEQERLNADLEARKKNLDSWS
                     KELNKREALTEREKQKLEEEKKKNEVQNTSLHMAEIEQKKADESVLRLVEDQKREKEE
                     ALKKVLELERQLDAKQKLEMEIEELKGKLQVMKHLGNDDDTAVQEQIKKMDDELKSKI
                     EEMGDVEDMNKTLVAKERQSNDELQDARKELIKGLQDMLSGRTNIGVKRMGEIDMKAF
                     HDACKEKFDHEEAQIKASELCSLWQDKLKNPEWHPMKVVAADGGGHKEVIDEEDELLK
                     NLKEEWGIGVFDAVVGAFKEMNEYNPSGRYVVNELWNFKDNRKATLKEVISYILKNLK
                     SLKRKR"
     misc_feature    284..412
                     /gene="LOC139839436"
                     /note="XS zinc finger domain; Region: zf-XS; pfam03470"
                     /db_xref="CDD:251981"
     misc_feature    500..811
                     /gene="LOC139839436"
                     /note="XS domain; Region: XS; pfam03468"
                     /db_xref="CDD:460933"
     misc_feature    <899..>1606
                     /gene="LOC139839436"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1649..2044
                     /gene="LOC139839436"
                     /note="XH domain; Region: XH; pfam03469"
                     /db_xref="CDD:460934"
     polyA_site      2415
                     /gene="LOC139839436"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cactcactca ctttttgtaa accgattttt ttccggttcc gatcaagcac cgtcgtttct
       61 ctaggcttgc agactgccgt gcttccttcc gacgacggtg gttcttgtca ctcactgttt
      121 ctgctaatcc ttttcccctg ttttgtagct aggatcgatg gattacagtt ctggtgatga
      181 ttctgacatc agtgattcgg atatcaatga gtacaaagat aagccgtatc aggaactgaa
      241 aaatggaacc ttaaaagtta agtttcctaa taatatcctt aggtgtccct tctgcgctgg
      301 aaagaaaaaa cagaatttca aatataaaga cttgcatcaa catgcaacag gagtgggaaa
      361 aggttcttcc aacagaagtg caaagcaaaa agcaaatcat caggctttag ctctgtactt
      421 agagaatgaa ctggctaacg aggctgaagt acctctaaaa gtggctccac ctaaacctgc
      481 agctccagtc tctgaagaaa atgacttgtt tgcctggcct tggactgggc tggtggttaa
      541 tatcattaaa gaggttgaag atgttgaaaa ttcatcctat tggatgaata gattttcaaa
      601 gtacaaacct gttggtgtgg agattttatg ggatgatcag aaacaaaccg cgcaggcctt
      661 ggtgagcttc aataatgact ggaccggttt taagaatgct atggagtttg agaagttctt
      721 tgaagcttct catcatagta gtaaggagtg ggttgcttct gaaagtcatt cgggtatcta
      781 cgcatggcta gctcgtgcga atgactttaa agagttacaa gggccggttg gagagtatct
      841 tcgccgtaat agaaagctaa gaacgatttc tgacattgtt caagaagcaa cgaacaccag
      901 gaataaagct gtggttgagt tggctagtga gattgacatg aggaatgaga atcttgatga
      961 tttgcaagtg aagtacaatc agaaaacaat gtctttgagt aggatgcttg aggaaaaaga
     1021 cagcctgcat gttgctttct acgaagagac aaagaagatg cagcgcattg cacgggatca
     1081 tgttaaaagg gtattagatg aacaagaaag gttgaatgcc gatttggagg cacggaagaa
     1141 aaatcttgat tcgtggagca aagaacttaa caaaagagaa gctttgacgg aacgcgagaa
     1201 gcaaaaacta gaggaggaga agaaaaagaa tgaggtgcaa aacacttctc tgcatatggc
     1261 tgaaattgag cagaaaaaag ctgatgagag tgtcttaagg cttgttgaag atcaaaagag
     1321 agaaaaggag gaggctttga agaaggtact agagttggag aggcaacttg acgctaagca
     1381 gaaattagag atggaaattg aagaacttaa agggaagctg caggtgatga agcatttggg
     1441 taatgatgat gatacagcag ttcaggagca gattaaaaag atggatgatg aactgaaatc
     1501 aaaaattgaa gaaatgggcg atgtggagga catgaataaa actcttgtcg ctaaagaacg
     1561 ccaaagtaat gatgagctgc aagacgctcg caaagagttg attaagggtc tgcaagatat
     1621 gttgagcggg cgtacgaata tcggggtgaa aaggatgggg gaaattgata tgaaagcgtt
     1681 tcacgatgct tgtaaagaga agtttgacca tgaagaagct cagatcaagg cctctgagtt
     1741 gtgttctttg tggcaggaca aacttaaaaa ccctgagtgg caccccatga aagttgtagc
     1801 tgcagacggt ggtggtcaca aggaggtgat tgatgaagaa gatgagttgc taaagaatct
     1861 caaggaggaa tggggaattg gcgtttttga tgcagtggtt ggtgctttta aggagatgaa
     1921 tgagtataac ccaagtggaa ggtatgtggt taacgagctt tggaacttca aagacaatcg
     1981 aaaagctaca ttgaaggaag ttattagcta catcttgaag aatttgaaga gcctcaagcg
     2041 caaaagatga taagattcct gagctggcgg atcctggatg gcaatcatga ggcatactat
     2101 ctttattttc ctttaacgaa gccgtgaatt aatgttaaca tctgaattct aaactagtat
     2161 ttgaaccgtg gatatcatta agcagtactc tatttttacg gcttgtctaa tctgtaatgt
     2221 tgttgcccct gttggcatta aagaatgctt ggaacctcgt ttattaaata atagcattaa
     2281 cctattagga atgaacggat gtagactaaa gataacaacg aatatataag tggaccccag
     2341 tggacatcat caataatgta acattatgta acgtgtcctt gtaattattt tatgtaaata
     2401 cgtgtgttta atgta
//
LOCUS       XM_071829499            2740 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839437), transcript variant X1, mRNA.
ACCESSION   XM_071829499
VERSION     XM_071829499.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2740
                     /gene="LOC139839437"
                     /note="uncharacterized LOC139839437; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839437"
     CDS             205..2214
                     /gene="LOC139839437"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685600.1"
                     /db_xref="GeneID:139839437"
                     /translation="MLGSSNCSSVFEQKPAFSGLGCTNPSGPFRSSYQPAFSGLGCTN
                     PPGPFGSSYQQSQPCFGTPYQQSQPGFWSSPAFGQSTSACSSSPFGTATSAFGTQSYP
                     FGAQATTPTFGSPGFGQSSFGGQRGGSRVTPYSQTPEAYNANCTQASGKLESISAMHT
                     YREKSHEELRWEDYQMGDKGGSNPAGPSFGGMGFNTNNTHENPFYWLPAFSQPANLFS
                     STTSTNPFAPNTSTFSTPGFGSSIPAKPTYKEKSYEEHRWEDYQRGHKGSSVFGQKPA
                     FGSFGSSFQQSQPAFGSSVFGSSPFGASSQPAFGATRTSTFGSTSTPPTFGNKGSAFG
                     VYSSSHFGSNTPPSNLGKVEEANEYTKRQESYAYITYITERLERLNLESVIPLADTIH
                     GLLTRKAAGNEAYKAGKYEDAVEHYTSALSCSLESRPFAAICYCNRAAAYKALGQVVD
                     AIADCSLAIALDPTYHKAISRRASLYEMIRDYGLASIDLRRLVSLLTTSQMDEKGLLS
                     DKASVVNELRKTQLWLNNVEKESRKKIPLNMYLILGVKSTAAASEIKKAYRKAALKHH
                     PDKAAQSVKSDNGMWKEIAENVYKDADTFFKLIGEAYAILSNPSKRSRYDMDEKMRNE
                     VNKYNGRSSSGKMATNVQSPTVFERSGSSRWRENSSSSYRYTWYS"
     misc_feature    1003..1206
                     /gene="LOC139839437"
                     /note="Nucleoporin FG repeat region; Region:
                     Nucleoporin_FG; pfam13634"
                     /db_xref="CDD:463941"
     misc_feature    <1396..>1671
                     /gene="LOC139839437"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); Region: 3a0801s09;
                     TIGR00990"
                     /db_xref="CDD:273380"
     misc_feature    order(1396..1401,1408..1413,1417..1419,1501..1503,
                     1510..1515,1522..1527,1531..1536,1603..1605,1612..1617,
                     1624..1629,1636..1638)
                     /gene="LOC139839437"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1396..1482
                     /gene="LOC139839437"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1495..1587
                     /gene="LOC139839437"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1600..1686
                     /gene="LOC139839437"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1822..2052
                     /gene="LOC139839437"
                     /note="DnaJ domain; Region: DnaJ; pfam00226"
                     /db_xref="CDD:395170"
     misc_feature    order(1900..1908,1981..1983,1990..1995,2002..2007)
                     /gene="LOC139839437"
                     /note="HSP70 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99751"
ORIGIN      
        1 tcgacatatt cacagacata tcgcctctcc gtctcaatcc ctctctttgg cgaatgatca
       61 tcttcaatac gtgtatcgta ggttgaattc gataggcgct aagctgattg atattgcata
      121 gtggtctagt ggacacgaat ttgcaggtgt acgcctgtat tcaattggac ttatattttg
      181 agccctaata ataaggaagg aacaatgctt ggctctagta actgttcgtc tgtgtttgag
      241 caaaagcctg catttagtgg cttgggatgc actaatccgt ctggaccttt tcgaagctca
      301 taccagcctg catttagtgg cttgggatgc actaatccgc ctggtccctt tggaagctca
      361 tatcagcaat cacaaccttg ttttggaacc ccatatcagc aatcacaacc tggtttttgg
      421 tcaagtcctg cttttggtca atcaacatct gcatgtagta gcagcccctt tggtactgcc
      481 acctcagcct ttgggactca aagttatccc tttggagctc aggctacaac accaacattt
      541 gggagtcccg gttttggaca atcgtctttt ggaggtcagc gtgggggaag tagagtaacc
      601 ccttattcgc aaacacctga ggcatacaat gctaattgca cacaggcttc tgggaaattg
      661 gagtcgattt cagcgatgca cacatacaga gaaaaaagcc atgaagaact tagatgggag
      721 gactatcaaa tgggagataa agggggctca aatcctgcag gcccgtcttt tggtggaatg
      781 ggcttcaata ctaacaacac acacgaaaac cctttttatt ggttgcctgc atttagccag
      841 cctgctaatc tgttttcttc tactacatct accaatccat ttgcccctaa tacatcaact
      901 ttcagtactc cgggtttcgg tagctcaata ccagcgaagc ccacatacaa agaaaaaagt
      961 tatgaagaac atagatggga ggactatcaa cgaggacata aaggttcatc tgtatttggg
     1021 caaaagcctg catttggtag ctttggatcc tcatttcaac aatcacaacc tgcttttgga
     1081 agcagtgtat ttggctcttc accatttgga gcttcaagtc aacccgcttt tggtgctaca
     1141 agaacatcaa cttttggttc tacatcgaca ccaccaacat ttggaaacaa aggctctgcg
     1201 tttggtgttt atagctcgtc tcattttgga tcaaacactc ctccctctaa tttagggaag
     1261 gtagaagaag ctaatgaata tacaaaaaga caagagagtt atgcttatat tacatatatt
     1321 acagaaaggc tagaaagact gaatttggag tcggtcatac ctttagctga cacgatacat
     1381 gggcttttaa ctagaaaggc agcaggaaat gaagcatata aagccggaaa gtatgaagat
     1441 gcagttgaac attacacatc tgcgttatca tgcagccttg aatcacgccc atttgcagcg
     1501 atatgttatt gtaaccgtgc agcagcttac aaagctttgg gtcaagttgt agatgccatt
     1561 gcagattgca gtttagctat agctcttgat ccaacctatc acaaggcaat atctagacgt
     1621 gcgagcctat atgaaatgat tagagactat ggactagcgt ctatcgatct tcgaagattg
     1681 gtatctcttt tgacaacatc acaaatggat gaaaagggcc ttctttctga taaagcaagt
     1741 gttgtaaatg agttaaggaa aactcagctc tggcttaata acgttgaaaa ggaatccagg
     1801 aaaaaaattc ccttaaatat gtatctcatt ttgggtgtta aatcaactgc tgctgcatca
     1861 gaaataaaga aggcgtatcg aaaagctgca ctgaaacatc atcctgataa ggctgcccaa
     1921 tctgtaaaaa gtgataatgg aatgtggaag gaaatagctg aaaatgttta caaagatgct
     1981 gatacgtttt tcaaattgat tggagaggct tatgctattc tttcaaaccc ttccaagagg
     2041 tcacgatatg acatggatga aaagatgaga aatgaagtaa acaaatataa tggtagaagc
     2101 agctcaggaa aaatggctac aaatgttcaa agccccactg tatttgagcg aagtgggagc
     2161 agtcgatggc gagaaaattc cagctcatca tatagatata catggtattc ttgatgttcg
     2221 gatggaatat aagatcaaac ttccagaatg taaatgggtt gcatgtgagt atatattgtg
     2281 caatgatcaa gcaacctgga tgtacaaatc tagcacgtgt ggacggaaag gaaaaaactt
     2341 cccatttgag gaaagtgggg atcgctagtc ttgtgtatta accggtaata caatcctgaa
     2401 agcagcgtgt acaagtgggg atgaggttgg atacatccgt tcgtgactta agtgtcagat
     2461 gagttgcaac aatgatatgc agaatggtga gacagtttca ttgtacttgt attttgtgag
     2521 gcttccgtgt atagtgattg tggtatgtta cttaaacaga ttactaatgg agtggactaa
     2581 ttcttttatt gatttatggt gttctgttag gaagtttaac gtatcaaaca ccttcaaggg
     2641 gttacaactt gggtattttt tttattagcg aagaaaccct tagcgagtac attgattccc
     2701 ccatagagga tggttttata tttgttaaaa tttattatta
//
LOCUS       XM_071829500            2413 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839437), transcript variant X2, mRNA.
ACCESSION   XM_071829500
VERSION     XM_071829500.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2413
                     /gene="LOC139839437"
                     /note="uncharacterized LOC139839437; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839437"
     CDS             349..1887
                     /gene="LOC139839437"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685601.1"
                     /db_xref="GeneID:139839437"
                     /translation="MHTYREKSHEELRWEDYQMGDKGGSNPAGPSFGGMGFNTNNTHE
                     NPFYWLPAFSQPANLFSSTTSTNPFAPNTSTFSTPGFGSSIPAKPTYKEKSYEEHRWE
                     DYQRGHKGSSVFGQKPAFGSFGSSFQQSQPAFGSSVFGSSPFGASSQPAFGATRTSTF
                     GSTSTPPTFGNKGSAFGVYSSSHFGSNTPPSNLGKVEEANEYTKRQESYAYITYITER
                     LERLNLESVIPLADTIHGLLTRKAAGNEAYKAGKYEDAVEHYTSALSCSLESRPFAAI
                     CYCNRAAAYKALGQVVDAIADCSLAIALDPTYHKAISRRASLYEMIRDYGLASIDLRR
                     LVSLLTTSQMDEKGLLSDKASVVNELRKTQLWLNNVEKESRKKIPLNMYLILGVKSTA
                     AASEIKKAYRKAALKHHPDKAAQSVKSDNGMWKEIAENVYKDADTFFKLIGEAYAILS
                     NPSKRSRYDMDEKMRNEVNKYNGRSSSGKMATNVQSPTVFERSGSSRWRENSSSSYRY
                     TWYS"
     misc_feature    676..879
                     /gene="LOC139839437"
                     /note="Nucleoporin FG repeat region; Region:
                     Nucleoporin_FG; pfam13634"
                     /db_xref="CDD:463941"
     misc_feature    <1069..>1344
                     /gene="LOC139839437"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); Region: 3a0801s09;
                     TIGR00990"
                     /db_xref="CDD:273380"
     misc_feature    order(1069..1074,1081..1086,1090..1092,1174..1176,
                     1183..1188,1195..1200,1204..1209,1276..1278,1285..1290,
                     1297..1302,1309..1311)
                     /gene="LOC139839437"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1069..1155
                     /gene="LOC139839437"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1168..1260
                     /gene="LOC139839437"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1273..1359
                     /gene="LOC139839437"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1495..1725
                     /gene="LOC139839437"
                     /note="DnaJ domain; Region: DnaJ; pfam00226"
                     /db_xref="CDD:395170"
     misc_feature    order(1573..1581,1654..1656,1663..1668,1675..1680)
                     /gene="LOC139839437"
                     /note="HSP70 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99751"
ORIGIN      
        1 accttgtttt ggaaccccat atcagcaatc acaacctggt ttttggtcaa gtcctgcttt
       61 tggtcaatca acatctgcat gtagtagcag cccctttggt actgccacct cagcctttgg
      121 gactcaaagt tatccctttg gtattaaatt atctgtagtt gtgttacaag tattgattcg
      181 ttacacagag ctcaggctac aacaccaaca tttgggagtc ccggttttgg acaatcgtct
      241 tttggaggtc agcgtggggg aagtagagta accccttatt cgcaaacacc tgaggcatac
      301 aatgctaatt gcacacaggc ttctgggaaa ttggagtcga tttcagcgat gcacacatac
      361 agagaaaaaa gccatgaaga acttagatgg gaggactatc aaatgggaga taaagggggc
      421 tcaaatcctg caggcccgtc ttttggtgga atgggcttca atactaacaa cacacacgaa
      481 aacccttttt attggttgcc tgcatttagc cagcctgcta atctgttttc ttctactaca
      541 tctaccaatc catttgcccc taatacatca actttcagta ctccgggttt cggtagctca
      601 ataccagcga agcccacata caaagaaaaa agttatgaag aacatagatg ggaggactat
      661 caacgaggac ataaaggttc atctgtattt gggcaaaagc ctgcatttgg tagctttgga
      721 tcctcatttc aacaatcaca acctgctttt ggaagcagtg tatttggctc ttcaccattt
      781 ggagcttcaa gtcaacccgc ttttggtgct acaagaacat caacttttgg ttctacatcg
      841 acaccaccaa catttggaaa caaaggctct gcgtttggtg tttatagctc gtctcatttt
      901 ggatcaaaca ctcctccctc taatttaggg aaggtagaag aagctaatga atatacaaaa
      961 agacaagaga gttatgctta tattacatat attacagaaa ggctagaaag actgaatttg
     1021 gagtcggtca tacctttagc tgacacgata catgggcttt taactagaaa ggcagcagga
     1081 aatgaagcat ataaagccgg aaagtatgaa gatgcagttg aacattacac atctgcgtta
     1141 tcatgcagcc ttgaatcacg cccatttgca gcgatatgtt attgtaaccg tgcagcagct
     1201 tacaaagctt tgggtcaagt tgtagatgcc attgcagatt gcagtttagc tatagctctt
     1261 gatccaacct atcacaaggc aatatctaga cgtgcgagcc tatatgaaat gattagagac
     1321 tatggactag cgtctatcga tcttcgaaga ttggtatctc ttttgacaac atcacaaatg
     1381 gatgaaaagg gccttctttc tgataaagca agtgttgtaa atgagttaag gaaaactcag
     1441 ctctggctta ataacgttga aaaggaatcc aggaaaaaaa ttcccttaaa tatgtatctc
     1501 attttgggtg ttaaatcaac tgctgctgca tcagaaataa agaaggcgta tcgaaaagct
     1561 gcactgaaac atcatcctga taaggctgcc caatctgtaa aaagtgataa tggaatgtgg
     1621 aaggaaatag ctgaaaatgt ttacaaagat gctgatacgt ttttcaaatt gattggagag
     1681 gcttatgcta ttctttcaaa cccttccaag aggtcacgat atgacatgga tgaaaagatg
     1741 agaaatgaag taaacaaata taatggtaga agcagctcag gaaaaatggc tacaaatgtt
     1801 caaagcccca ctgtatttga gcgaagtggg agcagtcgat ggcgagaaaa ttccagctca
     1861 tcatatagat atacatggta ttcttgatgt tcggatggaa tataagatca aacttccaga
     1921 atgtaaatgg gttgcatgtg agtatatatt gtgcaatgat caagcaacct ggatgtacaa
     1981 atctagcacg tgtggacgga aaggaaaaaa cttcccattt gaggaaagtg gggatcgcta
     2041 gtcttgtgta ttaaccggta atacaatcct gaaagcagcg tgtacaagtg gggatgaggt
     2101 tggatacatc cgttcgtgac ttaagtgtca gatgagttgc aacaatgata tgcagaatgg
     2161 tgagacagtt tcattgtact tgtattttgt gaggcttccg tgtatagtga ttgtggtatg
     2221 ttacttaaac agattactaa tggagtggac taattctttt attgatttat ggtgttctgt
     2281 taggaagttt aacgtatcaa acaccttcaa ggggttacaa cttgggtatt ttttttatta
     2341 gcgaagaaac ccttagcgag tacattgatt cccccataga ggatggtttt atatttgtta
     2401 aaatttatta tta
//
LOCUS       XM_071829501            1780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839438), mRNA.
ACCESSION   XM_071829501
VERSION     XM_071829501.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1780
                     /gene="LOC139839438"
                     /note="uncharacterized LOC139839438; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839438"
     CDS             74..1243
                     /gene="LOC139839438"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685602.1"
                     /db_xref="GeneID:139839438"
                     /translation="MGFNTNNTQENPFSLSPEFSPPANPFSSITSPNPFAPKSSTLKE
                     KSYEEFRWEACELRNKGSSVFGQKPALGATSTPTFGYTFGVSSSSFFGSSTPPFYLGK
                     SEEANDFTKRQESIEYITERLKSMSLESVIPLADWIHELLTRKAAGNEAYKAGKYADA
                     VEHYTCALSCSVVTRPFAAICFCNRAEAYKALGQVVDAIADCSLAIALDPTYHKAISR
                     RASLYEMIRDYGLAAIDIRRLVSLLTSQIDEKSLLSGASAVNELRKTYRWLNNVKKES
                     RRKIPLNMYLILGVESSAAASEIKKAYLKAALKHHPDKAARSVSRSENGDDGLLWKEI
                     AEKVYKDADRLFKMIGEAYAILSNPSKRSRYDMDEEMKNGYKCSKPFFERSASRR"
     misc_feature    <506..>781
                     /gene="LOC139839438"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); Region: 3a0801s09;
                     TIGR00990"
                     /db_xref="CDD:273380"
     misc_feature    order(506..511,518..523,527..529,611..613,620..625,
                     632..637,641..646,713..715,722..727,734..739,746..748)
                     /gene="LOC139839438"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    506..580
                     /gene="LOC139839438"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    605..697
                     /gene="LOC139839438"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    710..796
                     /gene="LOC139839438"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    926..1171
                     /gene="LOC139839438"
                     /note="DnaJ domain; Region: DnaJ; pfam00226"
                     /db_xref="CDD:395170"
     misc_feature    order(1004..1012,1100..1102,1109..1114,1121..1126)
                     /gene="LOC139839438"
                     /note="HSP70 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99751"
ORIGIN      
        1 ttagttttct tatatataaa aatttttgtt tatttctggg ggcccaaatc ctgcaggtct
       61 gtcttttgtt ggaatggggt tcaatactaa caacacacag gaaaaccctt tttctttgtc
      121 gcctgaattt agcccgcctg ctaatccgtt ttcttccatt acatctccca atccattcgc
      181 ccctaagtca tcaactttga aagaaaaaag ttatgaagaa tttagatggg aggcctgtga
      241 actaagaaac aaaggttcat ctgtatttgg gcaaaagcct gcacttggtg ctacaagcac
      301 accaactttt ggctatacgt ttggcgtttc tagctcgtct ttttttggat caagcactcc
      361 acccttttat ttaggtaaat cagaagaagc taatgatttt acaaaaagac aagagagtat
      421 tgagtatatt acagaaaggc taaaaagtat gagtttggag tcggtcatac ctttagctga
      481 ctggatacat gagcttttaa ctagaaaggc ggcgggaaat gaagcatata aagccgggaa
      541 atatgcagat gcagttgaac attacacttg tgccttatca tgcagcgttg taacacgccc
      601 ttttgcagcg atatgttttt gtaaccgtgc agaagcttac aaagctttgg gtcaagttgt
      661 agatgccatt gcagattgca gcttagctat tgctcttgat ccaacctatc acaaggcaat
      721 atctagacgt gcgagcttat atgaaatgat tagagactat ggactagcgg ctatcgatat
      781 tcgaagattg gtatctcttt tgacatcaca aatagatgaa aaaagccttc tttctggagc
      841 aagcgctgta aatgagctaa ggaaaactta tcgctggcta aataacgtta aaaaggaatc
      901 tagaagaaaa attcccttaa atatgtatct cattttgggt gttgaatcaa gtgctgctgc
      961 atcagaaatc aagaaggcat atctaaaagc tgcactgaaa catcatcctg ataaggcagc
     1021 ccgatcagtg agtagaagtg aaaatggaga tgatggatta ttatggaagg aaatagcaga
     1081 aaaagtttac aaagatgctg atagactttt taaaatgatt ggagaggctt atgctattct
     1141 ttcaaaccct tccaagaggt cacgatatga catggatgaa gagatgaaaa atggctacaa
     1201 atgttcaaag cccttttttg agcgaagtgc gagcagacga tgacaagaaa agtccagctc
     1261 atcgtatcga tatacaacaa ggtattcttg atgttgttac tcttggatgg gatatatatg
     1321 atcaaacttc caaattgtga acggttgtat gtgagtatga tttgtgcaat gatcaagcaa
     1381 cctgatgtac aaatctagca tgtgcttttt gacgagagtg gggattgcta gtcttgtgta
     1441 tgtaccggta atacaatcct gaaagcagtg tgtacaagtg gcactgtggt tggatacatc
     1501 tgttcgtgac ttaaaagtgc cagatgtgtt gtgacactga tatacaaaat ggtgagacag
     1561 ttgcattata cttttatttt gtgaggcttc catgtacagt gattatgtta tgtgatttaa
     1621 aacacataac agaacaggtg ttggttaaaa tcctgggtgg cgagttgtgc atcaagctat
     1681 aggttttata tgtgcagttc atagtttcta tttgtgtttt gttgagattt tgggcctgtg
     1741 agtatttggc cttgttttta cacaccatcc atacaatctg
//
LOCUS       XM_071829502            1306 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glucan
            endo-1,3-beta-glucosidase-like (LOC139839439), mRNA.
ACCESSION   XM_071829502
VERSION     XM_071829502.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1306
                     /gene="LOC139839439"
                     /note="glucan endo-1,3-beta-glucosidase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139839439"
     CDS             99..1115
                     /gene="LOC139839439"
                     /codon_start=1
                     /product="glucan endo-1,3-beta-glucosidase-like"
                     /protein_id="XP_071685603.1"
                     /db_xref="GeneID:139839439"
                     /translation="MESKLVILALLVIAVLNVTDAQSVGVCYGRNGDGLPSQQDVVKL
                     YQNNGITRMRIYDPDQATLQALKGTNIELMLGVPNDALQSLNDQNTANTWVNDNVVNY
                     PDVKFRYIAVGNEVDPNNENSKYVNFLFPALQNVHNAIKSANLDNQIKVSTATYTGLL
                     DKSSPPSSGVFKDNVKGFIGPIINYLAQNNLPMLANIYPYFGYLGDPNKNLPYALFTA
                     PGTVVNDNGRMYSNLFDAQLDAHYAAQAPLGGGNVEIVVSESGWPSAGGDGATLDNAG
                     TYYNNLIRHVKGTSGTPLKPGRSIETYLFAMFDENKKTGDETEKHFGIFSPNQQAKYQ
                     LNFT"
     misc_feature    168..1109
                     /gene="LOC139839439"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     Region: Glycosyl hydrolases; cl23725"
                     /db_xref="CDD:474034"
     polyA_site      1306
                     /gene="LOC139839439"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcttttttt ttttctatta ttaaatatat gcttgatgct tgattttctg cattataaat
       61 agcgttaaat cttttaagga attttataac cagaagacat ggaatcaaaa cttgtaatac
      121 ttgctcttct agttatagct gttctcaatg tcacagatgc acaatcggtt ggcgtgtgct
      181 acgggcgaaa tggtgatggt ttgccctcgc aacaagacgt ggtaaagctt taccaaaaca
      241 acggcataac aaggatgcga atctacgatc cagatcaagc aactctccaa gcactcaaag
      301 gaaccaacat cgaactcatg cttggtgttc ctaacgacgc cttacaatcc cttaacgatc
      361 aaaacaccgc aaacacttgg gttaacgaca acgtcgtcaa ctaccccgac gtcaagttta
      421 gatacattgc cgttggaaat gaagttgacc caaataacga aaatagtaaa tatgtaaatt
      481 ttctatttcc ggcgttacaa aatgttcaca acgcaattaa atccgcaaac ctagacaacc
      541 aaattaaagt ctcaaccgca acctacactg gtctcttaga caaatcgtct ccaccaagca
      601 gtggcgtttt taaagataat gtaaaggggt ttattgggcc gataattaat tatctagccc
      661 aaaataattt acctatgctt gctaacattt acccgtattt tggttacctt ggtgacccga
      721 ataagaatct tccgtacgcg ttgtttactg caccaggaac tgttgtgaac gataatggtc
      781 gaatgtattc taacttattt gatgcgcaat tagatgctca ttacgcagct caagcgccac
      841 ttggcggggg aaatgtggaa attgttgtgt cggaaagcgg atggccttca gctggtggtg
      901 atggagcgac gttagataac gctggaactt attataacaa tttgattcga catgttaaag
      961 ggacatcagg gacgccgttg aagccaggaa gatcgataga gacgtatttg tttgcgatgt
     1021 tcgatgaaaa caaaaaaacc ggagatgaaa cagagaaaca tttcgggatt ttttcgccta
     1081 atcaacaagc taagtaccag ttgaacttca cttagaaatg tttcatcatt ttgggaagta
     1141 aaaataatgt ttacatatag aaaataaagt agtcgttttg ctactaatat ggagtataca
     1201 tgtattattg aataaatcat gttggtacgt gataaacaag gagtgtatat aatggttgat
     1261 ttttattgtc ttgtatcgta ataataaaaa ctcgtcattt tcatcc
//
LOCUS       XM_071829503            3030 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein IQ-DOMAIN 32-like
            (LOC139839440), mRNA.
ACCESSION   XM_071829503
VERSION     XM_071829503.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3030
                     /gene="LOC139839440"
                     /note="protein IQ-DOMAIN 32-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139839440"
     CDS             132..2615
                     /gene="LOC139839440"
                     /codon_start=1
                     /product="protein IQ-DOMAIN 32-like"
                     /protein_id="XP_071685604.1"
                     /db_xref="GeneID:139839440"
                     /translation="MGKRSATSSCFKIISCGNTSTKDSVDLDDIDASSQQNKGSDKRG
                     WSFRRRSARHRVLSNTVVTNEPPSSSENKEISELKVIGSEPQIQSSISDKTNDNIWTE
                     DIQLPKLSNSSATKNDTVSVMVPETACEKEKEDDIKCEPDPDESESGSGFGSESAIVV
                     IQAAVRRFLAERELVKHKHVVKLQAAVRGHLVRTHAVGTLRCVQAIVKMQALVRARRD
                     KGVENSGNKSRPKYVSVEKLLSNRLARQLMESTPRTKQINIKCDPSKSDSAWSWLERW
                     MSVSSPEIIESRAPEHNQEKVVDVTYNVGEETILSEAKDNSITIDESSRVKNSEEEKP
                     ILESMEKPDSSLDKPIDLITEAQIELNMITENPVSETEPKPIHANPVSETGPEPILAN
                     PVLESEPESVLDNPVLETEPNPNLENPVAEPEVGSVFENHVLEIEPKRVEKRVATDQA
                     DSESRKSVFGSRKASNPAFIAAQSRFEELTSKANSIKSSNSLNYDDEPLKSSSSTNQG
                     DVAGSGSTADISSSDPLKLDNEVDSSVNNIDLHEKAAPVTDVEPEEYSVSDGSKVVQT
                     GWSECGTELSITSTLDSPDQSLEAENKKAVDEEDKVLDEIVSDTHDNDHNIDIDIAEK
                     HDDNVITLADENPDSSVIESNLISGNSELKHEHEKMVPESQGTPSSEISTNSTKKSKS
                     NKKVSSQKRKSWSTTEKSPSRSSVDSGLRRSLEQLPKDAKSGKRRNSFGSPKPNQVDK
                     EGKDSSNSNSSIPSYMQATESAKLKAIANSSPKSSPDLQDKEYNLKKRHSLPGAVNGR
                     QGSPRIQRSMSQALQSTKANGNQERKWQR"
     misc_feature    2325..2573
                     /gene="LOC139839440"
                     /note="Protein of unknown function (DUF4005); Region:
                     DUF4005; pfam13178"
                     /db_xref="CDD:404128"
     polyA_site      3030
                     /gene="LOC139839440"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaaactaaa agaaacacac tcaaatgcgt cgcctcagtg acacccaaaa acacctccac
       61 tatcactatg ttttttattt tgatgtaatc aattaaaatc aaaaatcaat aattaatttg
      121 tcaacaacaa tatgggaaaa agatccgcaa catcatcttg tttcaagatc atttcttgtg
      181 gtaatacaag caccaaagat tctgttgatc ttgatgatat tgacgcttca tcacagcaga
      241 acaaaggtag cgataaacga ggatggagtt ttaggagacg atcagctagg catcgagtgc
      301 tgagcaatac agttgttacg aacgaaccac cttcttcttc agagaataag gagatctcag
      361 aattgaaagt tatcggttct gaaccgcaaa ttcaatctag catatctgat aaaactaatg
      421 acaatatatg gacagaggat attcagttgc ctaaattgtc aaattcgagt gcaaccaaaa
      481 atgatacagt ttcagttatg gttcccgaaa ctgcgtgtga aaaagaaaaa gaggatgata
      541 ttaaatgtga acccgatcct gatgaatctg aatctggatc tggatttgga tctgaatcag
      601 ctattgttgt gatccaggct gctgttagga gattcttggc tgagagagaa ttggtaaaac
      661 ataagcacgt ggtgaaattg caagctgctg tgagagggca tttggttcgt actcatgccg
      721 tcggaacttt acggtgcgtt caagctattg tcaagatgca agctcttgtt cgtgctcgtc
      781 gagataaggg agtagagaat tccggaaata aatcgcgtcc gaagtatgtt tctgttgaga
      841 agctattaag caacagactt gctcgccagt taatggaatc tacaccgagg accaaacaga
      901 ttaacataaa atgcgatcct tcaaaatccg attcagcttg gagttggttg gagagatgga
      961 tgtctgtttc ttcaccagaa attattgagt cgcgagcacc agaacacaat caagaaaaag
     1021 ttgttgatgt tacgtataac gttggtgaag aaacgatatt atctgaagca aaagataact
     1081 cgatcacaat cgatgaaagt tctcgtgtaa aaaactctga agaggagaag ccgatactag
     1141 agtcgatgga gaaacccgat tcttcactcg ataaacctat cgatttgatt actgaagcac
     1201 agattgagtt aaatatgatt actgagaatc ctgtatctga aaccgagccc aaaccaattc
     1261 atgcaaatcc tgtatccgaa actgggcccg aaccgattct tgcaaatcct gttttagaaa
     1321 gtgagcccga atcagttctt gataatcccg tattagaaac tgaaccaaac ccaaatcttg
     1381 aaaatcccgt agcagaaccc gaagttggct ccgtttttga aaatcatgtt ttggaaatcg
     1441 aaccgaaacg tgtagaaaaa agggttgcta ctgatcaagc agattcggag tcaagaaaat
     1501 ctgtgtttgg atcacgaaag gcaagtaatc cggcttttat tgcagctcag tcaaggtttg
     1561 aagagttgac ttctaaggcc aactcaataa aatcgtctaa ttctttgaat tacgatgatg
     1621 agccgttaaa atcatccagt tcaacaaacc agggtgatgt ggcaggctca ggttcgactg
     1681 cagatatctc ttcttctgac ccgctgaaac tcgataatga agttgattca tctgtcaata
     1741 atattgatct tcatgaaaaa gcagcaccag tgactgatgt cgaaccagaa gaatactctg
     1801 tttctgacgg ttcaaaggtg gtccagactg gctggtccga atgtgggacc gaactgtcca
     1861 tcacatccac acttgactca ccagatcaat ctctagaagc tgaaaacaag aaagcggttg
     1921 atgaggaaga taaagtttta gatgaaatcg ttagtgatac gcatgataat gaccataaca
     1981 tagacatcga tattgctgaa aaacacgacg ataatgttat taccctagct gacgaaaatc
     2041 ccgatagcag tgtcatcgag tcgaatctca tttcaggaaa ctcggagtta aaacacgagc
     2101 acgagaaaat ggttccagaa tcacaaggaa cgccgtctag cgagatctcg acaaacagca
     2161 ccaaaaagtc taaaagtaac aaaaaagtat cgagtcaaaa acgcaagtct tggtcaacta
     2221 ccgagaaatc tccctcgaga tctagtgtcg attctggatt aaggaggagt ttggagcagt
     2281 tgcctaaaga tgcaaaatcc ggaaaaagga gaaattcgtt cggttcaccg aaaccgaatc
     2341 aagtggataa agaaggtaaa gatagcagca atagtaatag ttcgatcccg agttacatgc
     2401 aagcaaccga atctgcaaag ttaaaagcga tagcaaatag ttccccgaag tcgagtcccg
     2461 atttgcaaga taaggaatat aatctgaaaa agagacactc gttacctggt gcagtaaacg
     2521 gtcggcaagg ttcgcctcgc atacagaggt ccatgtctca ggcgctacaa tccacaaagg
     2581 caaatggcaa tcaagagcgg aaatggcaga ggtaaagttg tacacagagc ggaaatggca
     2641 gaggtaaagt tgtacacagg tgagctcagc aaaagttgaa gatgacataa taagtgagag
     2701 tactgaagct tgatttgttt aacaagtagg tatgggcttt ctggtgccag tgatttttct
     2761 agtcggggtc attaaatcga acgatcaaca atatactact agtgtatcga gtgtggttat
     2821 ttggttattg gttgttgtat tattttacat gaatgaattt gttggtgttt tctttttcag
     2881 tggtctgatt gtgtatttgt ttaaacagtg cttgtcattt tgttggggtt tttttttgtc
     2941 ccttttggta aagcttttat atttgtggtt attggtataa agtttaaaca atgatatata
     3001 tatatataat gttgaggatt atgttatgca
//
LOCUS       XM_071829504            1062 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GDSL esterase/lipase
            At2g30220-like (LOC139839441), mRNA.
ACCESSION   XM_071829504
VERSION     XM_071829504.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1062
                     /gene="LOC139839441"
                     /note="GDSL esterase/lipase At2g30220-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839441"
     CDS             1..1062
                     /gene="LOC139839441"
                     /codon_start=1
                     /product="GDSL esterase/lipase At2g30220-like"
                     /protein_id="XP_071685605.1"
                     /db_xref="GeneID:139839441"
                     /translation="MAFTIFIFILLLKVSISVSTKNLTNLFTSVIVFGDSTADSGNNN
                     YISTPFKADHLPYGRDFPGKIPTGRFSNGKLVPDFWVSLLGIKETIPPYLQPNLTDYD
                     IRTGVNFASAGSGYDEVTSQISQVIPLTRQLRFFKEYLKRLKKVVGVEEAKRIVNGAL
                     VSISAGTNDFTISYYDLRTRKNDFAIGDYQDYVLKKLENFINELYKLGCRTMVVSGLP
                     PMGCLPIQMASRFTRRCIKDQNFDARIYNQKLKKLLPQLQSSLNRSMIIYTNIYAPVM
                     DMIRNPQKHGFTRTKVGCCGIGFEAGPICTPFTPLCTNPRNYLFFDSIHPSEAAYRFI
                     TKTLLKQILHYYNSSSHVY"
     misc_feature    82..1017
                     /gene="LOC139839441"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; Region:
                     SGNH_plant_lipase_like; cd01837"
                     /db_xref="CDD:238875"
     misc_feature    order(106..108,337..339,502..504,964..966,973..975)
                     /gene="LOC139839441"
                     /note="active site"
                     /db_xref="CDD:238875"
     misc_feature    order(106..108,964..966,973..975)
                     /gene="LOC139839441"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     misc_feature    order(106..108,337..339,502..504)
                     /gene="LOC139839441"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
ORIGIN      
        1 atggcattca ccatttttat cttcatccta cttctcaaag tatcaatatc cgtttcaact
       61 aaaaatctca caaatttatt cacttcggtc attgtttttg gtgactcaac agccgattca
      121 ggaaacaaca actacatttc aaccccgttc aaagcggacc atcttccata tggtcgggat
      181 ttccctggaa aaattccaac cggtcggttt tctaatggaa aactggtacc agatttctgg
      241 gtttctttgt taggaataaa agaaacgatc ccaccttatt tgcaaccgaa tttaacagat
      301 tatgatattc gtacaggagt gaattttgct tcggctggat cggggtatga tgaagttact
      361 tcccaaatat ctcaagtcat tccgttaact agacaattgc gtttctttaa agagtatctt
      421 aaaaggttga agaaagttgt gggggtagaa gaagcaaaaa ggatagttaa tggggcatta
      481 gtgtcaatta gtgccggaac aaatgatttc acaattagct actacgatct ccgtacaaga
      541 aaaaatgatt ttgctattgg tgactatcaa gattatgtgt taaaaaagct cgaaaatttc
      601 atcaatgagc tgtataagct tggatgtcga acaatggtgg tttcgggact accaccgatg
      661 ggttgtttac caattcaaat ggcgtcgaga tttacaagaa gatgcataaa ggatcagaat
      721 tttgacgcta gaatctataa tcaaaagctt aagaagttgt tgcctcaact tcaatcgtcg
      781 ttgaacagaa gcatgattat ttatactaat atctacgctc cggtgatgga tatgattcga
      841 aatccacaaa aacatggatt tacccggaca aaagtgggat gttgtggaat tggatttgaa
      901 gcagggccaa tatgtacacc ttttactcca ctatgtacaa accctagaaa ctacttgttt
      961 tttgatagca ttcatccaag tgaagctgcc taccgtttca ttaccaaaac ccttttgaaa
     1021 caaatcctcc attactataa tagctctagc catgtttact aa
//
LOCUS       XM_071829505            1061 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            galacturonosyltransferase-like 1 (LOC139839442), mRNA.
ACCESSION   XM_071829505
VERSION     XM_071829505.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1061
                     /gene="LOC139839442"
                     /note="probable galacturonosyltransferase-like 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 75 Proteins"
                     /db_xref="GeneID:139839442"
     CDS             11..1036
                     /gene="LOC139839442"
                     /codon_start=1
                     /product="probable galacturonosyltransferase-like 1"
                     /protein_id="XP_071685606.1"
                     /db_xref="GeneID:139839442"
                     /translation="MIHPKLPPTSTVFLLLLCITAATTTATTSHKFKEAPKFYNAESC
                     PPIDTSSQSNIHVAMTLDNTYIRGAMAAILSILQHSQCPQNIIFHFIIATSSNMSNLH
                     TKITTSFPYLNFQIYPFNTSSVSRLISTSIRSALDCPLNYARSYLADILPLHVTKIVY
                     LDSDIILFDDIAKLANTPITNSLVLAAPEYCDANFTFYFTPTFWSNPSLSLTFANRKT
                     CYFNTGVMVIDLQKWRLGEYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDH
                     RWNQHGLGGDNFRGLCRNLHPGPVSLLHWSGKGKPWVRLDAKRPCPLDALWAPYDLLK
                     PQFSFDS"
     misc_feature    176..946
                     /gene="LOC139839442"
                     /note="Glycosyl transferase family 8; Region:
                     Glyco_transf_8; pfam01501"
                     /db_xref="CDD:279798"
     misc_feature    order(188..190,194..196,284..286,494..496,500..502)
                     /gene="LOC139839442"
                     /note="active site"
                     /db_xref="CDD:132997"
ORIGIN      
        1 tccaaccacc atgatccacc ctaaactacc acctacatcc accgtgttcc tcctcctcct
       61 ctgcatcaca gccgccacta caaccgcaac aacttcacat aaattcaaag aagcaccaaa
      121 attctacaac gccgaatcct gccctccaat cgacacatca tcacaatcca atatccacgt
      181 ggcaatgaca ctcgacaata catacatccg cggagcaatg gccgccattc tctccattct
      241 ccaacactcg caatgcccac aaaacataat ctttcacttc atcattgcca cgtcatcaaa
      301 catgtcaaac ctgcacacaa aaatcaccac ctcatttcca tacttaaatt tccaaattta
      361 ccctttcaac acttcatccg tatcaagact tatttcaact tcaattcgat ccgcattaga
      421 ttgtccatta aactacgctc gatcatacct cgctgacatt ctcccattac acgtcaccaa
      481 aatcgtgtac ctagattccg acatcatatt attcgacgac attgcaaaat tagccaacac
      541 accaattaca aattcattag tactagccgc gcccgaatat tgtgacgcga attttacatt
      601 ttatttcact ccaacatttt ggtctaaccc ttctttatct ttaacatttg ctaaccgaaa
      661 aacatgttat tttaacacgg gcgtaatggt gatcgattta caaaaatgga gattaggaga
      721 atatacaaga aaaattgaag aatggatgga attacaaaaa agaatgagaa tatatgagtt
      781 gggatcattg ccaccttttt tattagtgtt tgccggaaac atagctccgg tggatcatag
      841 atggaatcaa cacgggttag ggggtgataa tttccgggga ctttgtcgga atttgcatcc
      901 gggtccggtt agtttattgc attggagtgg taaggggaag ccatgggtga gacttgatgc
      961 taaaagacca tgtcctttag atgcactttg ggcaccttat gatcttttga aaccacaatt
     1021 ttcttttgat tcttgataaa tcaaagaatc aagatagatg a
//
LOCUS       XM_071829506             693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839443), mRNA.
ACCESSION   XM_071829506
VERSION     XM_071829506.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..693
                     /gene="LOC139839443"
                     /note="uncharacterized LOC139839443; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839443"
     CDS             1..693
                     /gene="LOC139839443"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685607.1"
                     /db_xref="GeneID:139839443"
                     /translation="MSWVRWDKILGPFVRGLNIGGLKAFNLALIYKWRWRFLTNPNDM
                     WVALIKSIHGPLFEKTNSHTSTWSSIVANCSNISIESLLPSDCFKMKIGYGRNISFWL
                     DLWCGNSTLKSRFNRLYHLDLNKLDVLADKHVEGMWQWQWVRDITSGCNAQLFDDLLV
                     EIGNCSFNDQPDSWSCSLSAEGVFSVKDARVTIDNILLPYSNTSTLWFKFIPRKVNIF
                     LWRLRLDSLLVR"
ORIGIN      
        1 atgtcgtggg ttagatggga caaaatttta ggtccattcg ttcgtggact taatattggt
       61 ggtctaaaag cttttaactt ggcattgatc tataaatggc gttggagatt tttaacaaat
      121 ccgaatgaca tgtgggtggc ccttattaaa tcgatacatg gtcctttatt tgagaaaaca
      181 aactcgcata ctagtacttg gtcatctata gttgcgaatt gttccaatat ttcaattgaa
      241 agcttactac cgtcagattg ttttaaaatg aagattggtt atggtagaaa cattagtttt
      301 tggcttgatc tttggtgtgg taattcgact ctcaagtctc ggtttaatcg cctctatcat
      361 ttggatctaa ataagctcga tgtcctggct gataaacatg tggaaggcat gtggcaatgg
      421 caatgggtga gagatattac tagtggttgt aatgctcagt tatttgacga tctcctagtc
      481 gaaattggca actgctcatt taatgatcaa cctgattcct ggtcttgctc tttgtctgct
      541 gagggagtgt tctcggtaaa ggatgctaga gtcactatag acaacatctt actgccatat
      601 tctaacacga gcacgttgtg gttcaagttt atcccaagga aagttaatat ttttctgtgg
      661 cgtttaagat tggactctct tctcgttcgt tga
//
LOCUS       XM_071829507            1771 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIC 40,
            chloroplastic-like (LOC139839444), transcript variant X1, mRNA.
ACCESSION   XM_071829507
VERSION     XM_071829507.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1771
                     /gene="LOC139839444"
                     /note="protein TIC 40, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839444"
     CDS             46..1281
                     /gene="LOC139839444"
                     /codon_start=1
                     /product="protein TIC 40, chloroplastic-like isoform X1"
                     /protein_id="XP_071685608.1"
                     /db_xref="GeneID:139839444"
                     /translation="MENSTVYSSSSQKLVLGFTPKHRTNSTISKKPIFCSFKIPQKRT
                     LISKSKTLVSAISHNQGSTPSSIAKPNDNLGKDCFAKISPSSNQFTSSVGATPPIAVP
                     PPSSQVGSPLFWVGVGVALSAAFSWVASYLQKYATQQAVRMMMGQMNTQNNQFSNTGF
                     SPGSPFPFPTPAEPGSSAKSPFPFPTPTSQGSAAASGPASQRTVTVDVPPKKIETPPA
                     PAHSKDDFESSEPKKSAFVDVSPEETLKTSFEKLEESPETESPKESQFANQASQNGAA
                     FKPMGNPFEGASSAGQTGPVMSVEALEKMLEDPTVQKMMYPYLPEEMRNPTSFKWMLQ
                     NPQYRQQLQEMLNSMGGSPEWDNSMMDSLKNFDISSPEVKEQFGNFLIKLQLLVSIFV
                     ESLEYRESNKTTLTRILIE"
     misc_feature    <295..933
                     /gene="LOC139839444"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    901..>1074
                     /gene="LOC139839444"
                     /note="UCH-binding domain; Region: RPN13_C; pfam16550"
                     /db_xref="CDD:465170"
ORIGIN      
        1 atttgtatcc tgctatctta aatacgtagt agtaagttcc agtccatgga gaattcaact
       61 gtctattctt cttcttcaca aaaactggtt ttgggtttta ctccaaaaca tcgaactaat
      121 tctacaatct ccaaaaaacc tattttttgt tcttttaaaa tcccccaaaa aagaacccta
      181 atttcaaaat ctaaaacatt agtttctgct atttctcaca atcagggctc aacaccgtca
      241 tcaattgcta aaccaaatga taacttaggg aaagattgct ttgctaaaat ttcaccttca
      301 agtaatcagt ttacgtcttc ggttggtgcg accccaccaa ttgcagtgcc accaccatct
      361 tctcaagtag gttctccttt attttgggtg ggagttggtg ttgcattgtc ggccgctttt
      421 tcatgggtgg cttcatactt acagaaatat gctacgcaac aagccgttag gatgatgatg
      481 ggacaaatga acacacaaaa taaccaattt tctaacactg gtttttcacc tggatcaccg
      541 tttccgtttc caacgcccgc agaacctggt tcgtctgcca aatcaccttt tccgtttccg
      601 acacccacat cccaaggttc agctgctgca tcgggacctg cttctcaacg gacggtgacc
      661 gtagatgtac cgcctaaaaa aatagagaca ccacctgcac cagcacattc taaagacgac
      721 tttgaatctt cagagccaaa gaaatctgct tttgttgatg tgtctcctga ggaaacattg
      781 aaaacaagtt ttgaaaagct tgaagaatct ccagagaccg aatctccgaa agaatctcaa
      841 tttgcgaacc aagcttcaca aaatggagct gcgtttaagc cgatgggtaa tccatttgag
      901 ggggcttcat ccgcaggtca gacaggtcct gttatgtctg ttgaagctct ggagaaaatg
      961 ttggaggatc caactgtaca aaagatgatg tatccgtatc ttccagaaga gatgaggaac
     1021 cctacctcct tcaaatggat gcttcaaaac ccacaatatc gtcaacaact acaggaaatg
     1081 ctaaatagca tggggggaag ccctgaatgg gacaacagta tgatggattc tttgaagaat
     1141 tttgatatta gcagtcccga agtgaaagag caatttggta attttcttat taaattacaa
     1201 ttgttggttt caatttttgt tgagtcactc gaatatcgag aatcaaataa aacaacattg
     1261 actcggattt taatagagtg atagacaatc tgtggtttta ctgtatataa agctggcaaa
     1321 taacatgtca aaatgggtaa tttcttagtt tcggtcaaaa caggttggac tgggttgact
     1381 taggtccacc caaccgcaag caactcttta tcgtcaatgt gtgaaatatg attgcaatag
     1441 ttatattaga ttgtctgata cattttatac atctcaaatg accatcaacc tgttttttca
     1501 gtagttaaat cttttagttt taatccttga ttaatttaaa aattgcccta atcaacccga
     1561 tggaggtatc tgagtcaaag ttgaagcatc tttgataata ttgatggcgt gggatgaatt
     1621 tatcgagcac ctaatttaga taaataccga ccttaatgag atcacatgac ggccttaaat
     1681 tttggcccgt gctacatgta taaatatgtg ctctggtttc acatataatc ttagtatgta
     1741 tatggttaat gatattagtt tcatctatta t
//
LOCUS       XM_071829508            1714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIC 40,
            chloroplastic-like (LOC139839444), transcript variant X2, mRNA.
ACCESSION   XM_071829508
VERSION     XM_071829508.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1714
                     /gene="LOC139839444"
                     /note="protein TIC 40, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139839444"
     CDS             46..1392
                     /gene="LOC139839444"
                     /codon_start=1
                     /product="protein TIC 40, chloroplastic-like isoform X2"
                     /protein_id="XP_071685609.1"
                     /db_xref="GeneID:139839444"
                     /translation="MENSTVYSSSSQKLVLGFTPKHRTNSTISKKPIFCSFKIPQKRT
                     LISKSKTLVSAISHNQGSTPSSIAKPNVDNLGKDCFAKISPSSNQFTSSVGATPPIAV
                     PPPSSQVGSPLFWVGVGVALSAAFSWVASYLQKYATQQAVRMMMGQMNTQNNQFSNTG
                     FSPGSPFPFPTPAEPGSSAKSPFPFPTPTSQGSAAASGPASQRTVTVDVPPKKIETPP
                     APAHSKDDFESSEPKKSAFVDVSPEETLKTSFEKLEESPETESPKESQFANQASQNGA
                     AFKPMGNPFEGASSAGQTGPVMSVEALEKMLEDPTVQKMMYPYLPEEMRNPTSFKWML
                     QNPQYRQQLQEMLNSMGGSPEWDNSMMDSLKNFDISSPEVKEQFDQIGLTPEEVISKI
                     MANPEVAMAFQNPRVQAAIMDCSQNPMSIMKYQNDKEVMDVFNKISELFPGVTRAP"
     misc_feature    <298..936
                     /gene="LOC139839444"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    904..>1077
                     /gene="LOC139839444"
                     /note="UCH-binding domain; Region: RPN13_C; pfam16550"
                     /db_xref="CDD:465170"
     misc_feature    1198..1356
                     /gene="LOC139839444"
                     /note="STI1 domain; Region: STI1; pfam17830"
                     /db_xref="CDD:436075"
     polyA_site      1714
                     /gene="LOC139839444"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atttgtatcc tgctatctta aatacgtagt agtaagttcc agtccatgga gaattcaact
       61 gtctattctt cttcttcaca aaaactggtt ttgggtttta ctccaaaaca tcgaactaat
      121 tctacaatct ccaaaaaacc tattttttgt tcttttaaaa tcccccaaaa aagaacccta
      181 atttcaaaat ctaaaacatt agtttctgct atttctcaca atcagggctc aacaccgtca
      241 tcaattgcta aaccaaatgt agataactta gggaaagatt gctttgctaa aatttcacct
      301 tcaagtaatc agtttacgtc ttcggttggt gcgaccccac caattgcagt gccaccacca
      361 tcttctcaag taggttctcc tttattttgg gtgggagttg gtgttgcatt gtcggccgct
      421 ttttcatggg tggcttcata cttacagaaa tatgctacgc aacaagccgt taggatgatg
      481 atgggacaaa tgaacacaca aaataaccaa ttttctaaca ctggtttttc acctggatca
      541 ccgtttccgt ttccaacgcc cgcagaacct ggttcgtctg ccaaatcacc ttttccgttt
      601 ccgacaccca catcccaagg ttcagctgct gcatcgggac ctgcttctca acggacggtg
      661 accgtagatg taccgcctaa aaaaatagag acaccacctg caccagcaca ttctaaagac
      721 gactttgaat cttcagagcc aaagaaatct gcttttgttg atgtgtctcc tgaggaaaca
      781 ttgaaaacaa gttttgaaaa gcttgaagaa tctccagaga ccgaatctcc gaaagaatct
      841 caatttgcga accaagcttc acaaaatgga gctgcgttta agccgatggg taatccattt
      901 gagggggctt catccgcagg tcagacaggt cctgttatgt ctgttgaagc tctggagaaa
      961 atgttggagg atccaactgt acaaaagatg atgtatccgt atcttccaga agagatgagg
     1021 aaccctacct ccttcaaatg gatgcttcaa aacccacaat atcgtcaaca actacaggaa
     1081 atgctaaata gcatgggggg aagccctgaa tgggacaaca gtatgatgga ttctttgaag
     1141 aattttgata ttagcagtcc cgaagtgaaa gagcaatttg atcaaattgg acttacacct
     1201 gaagaagtta tatctaaaat aatggctaat cctgaagttg ccatggcatt tcaaaacccg
     1261 agagttcaag cggccatcat ggattgttct caaaacccga tgagcatcat gaagtaccaa
     1321 aatgacaagg aggttatgga tgtgttcaat aagatatcag aactatttcc cggagtgact
     1381 cgggcccctt aattgtaatc atggtatgaa tttttttgtt agaaactagt ctactttcgg
     1441 taatgagtga gtttaaagct gcagaaacaa atcatctgac gcggaccgtt agctatagtt
     1501 aatcacgtga gtttggccct tggggttgcc gttagaaaac caccattaag ctattaaata
     1561 ttaatcacgt tggggtttct tcaaaatcta gtgtcttgtt cacttatttc ttcgtgtgtc
     1621 aaagtaaaat acgtgtacaa ataattgggt tgcatttttg ttttgaaacg tgtatgaaga
     1681 cttttccttg tttagtagca tgttattatt acaa
//
LOCUS       XM_071829509             459 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides myb-related protein
            Hv33-like (LOC139839446), mRNA.
ACCESSION   XM_071829509
VERSION     XM_071829509.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..459
                     /gene="LOC139839446"
                     /note="myb-related protein Hv33-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839446"
     CDS             1..459
                     /gene="LOC139839446"
                     /codon_start=1
                     /product="myb-related protein Hv33-like"
                     /protein_id="XP_071685610.1"
                     /db_xref="GeneID:139839446"
                     /translation="MWQELQIKMDKLSTTRWAEIARYLPGRTDSAVKNFWNSNMKKKL
                     VAATPSNDHPQTYNDQDHQVSSPSSLLKCDEEIKKGIDVDVELPPLPPSFMGDSCHVL
                     DQHLPDNFDFNYGQTMDPDHLEMQFETCGANCADLLLDNQPNIQFLDVIP"
     misc_feature    <7..>294
                     /gene="LOC139839446"
                     /note="Transcription repressor MYB5; Provisional; Region:
                     PLN03212"
                     /db_xref="CDD:178751"
ORIGIN      
        1 atgtggcaag agttgcagat taagatggat aaattatcta caaccagatg ggcagaaata
       61 gcaagatact tacctggaag aacagatagt gcagtaaaaa acttctggaa ctccaacatg
      121 aaaaagaagc ttgtggctgc tactcccagc aatgatcacc cacaaacata caatgatcaa
      181 gatcatcaag ttagttcacc atcatcgttg cttaaatgtg atgaagaaat taaaaaaggc
      241 atagatgttg atgttgagct tcctcccctt ccaccatcat tcatgggtga ttcatgtcac
      301 gttcttgatc aacatctacc agacaacttt gactttaatt atggtcaaac tatggatcca
      361 gatcatctgg aaatgcaatt cgagacatgt ggggcgaact gtgcagattt gctccttgat
      421 aatcaaccaa atattcagtt cttagatgta ataccatga
//
LOCUS       XM_071829510            1179 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides LOB domain-containing
            protein 22-like (LOC139839447), mRNA.
ACCESSION   XM_071829510
VERSION     XM_071829510.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1179
                     /gene="LOC139839447"
                     /note="LOB domain-containing protein 22-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839447"
     CDS             1..1179
                     /gene="LOC139839447"
                     /codon_start=1
                     /product="LOB domain-containing protein 22-like"
                     /protein_id="XP_071685611.1"
                     /db_xref="GeneID:139839447"
                     /translation="MSNNHIHNQNHHNNHNKLINHHRYPSSSTTSNRSTITSTRSNST
                     TQACAACRYQRRKCAPDCVLAPYFPHDRQRQFQNAHKLFGVSNITKIIKDLDPPQKDE
                     AMRTIIYQSDVRAHDPVGGCYRIIRELQRHIEYTRAELDIVLHQLAICRTHAIHNQQN
                     QDQIIIDGVDCDIRDPNLYEDDEQHHGLDLDLGQIGQTGQIPQQQDNKNQEEYILSEQ
                     NCEDDNAVQLQEINSWANMNNSPSSTICLEVKPQSDECQDFKPLLINEIPSGERHEFK
                     FEFDEINEPSSSGSGLTLFVRGKDFDSIEEILFNEGNEKGLIKEENVTTFFTKEENVS
                     YQQHNEDHDLKEHNSKNCGIPPTFVFEYIEEKKKQIWQLISNENNVKGRGNNMKETDT
                     "
     misc_feature    139..435
                     /gene="LOC139839447"
                     /note="Lateral organ boundaries (LOB) domain; Region: LOB;
                     pfam03195"
                     /db_xref="CDD:460843"
ORIGIN      
        1 atgtccaata atcatattca taatcaaaat catcataata atcacaacaa attaattaac
       61 caccaccgtt atccatcatc atccaccaca agtaaccgtt caaccatcac cagtacaaga
      121 tccaactcca ccacgcaagc gtgcgcagcg tgccgttacc aacgtcgaaa gtgtgcaccg
      181 gattgcgttc tagcaccgta ctttccacat gaccgccaac gacagtttca aaacgcccat
      241 aaattgtttg gtgttagtaa cattacgaaa ataattaaag accttgatcc accgcaaaag
      301 gacgaagcaa tgcgtacgat tatatatcaa tcggatgttc gtgctcatga ccctgttggt
      361 ggttgttatc gtatcatacg agaacttcaa cgacacattg aatatacgcg agcggagctc
      421 gatattgttt tgcatcagct agcaatttgt cgaacacatg caattcataa tcaacaaaat
      481 caagatcaaa ttataataga tggtgtggat tgtgatatcc gcgatccgaa tctatacgaa
      541 gatgatgaac aacatcatgg tcttgatctc gatttgggtc aaataggcca aacgggtcaa
      601 ataccgcaac agcaagataa caagaatcaa gaggaatata ttttaagtga acaaaattgt
      661 gaagatgaca atgcggttca acttcaagag ataaattcat gggcgaatat gaataattca
      721 ccatcttcca ctatttgttt ggaggtgaaa cctcagtcgg atgaatgtca ggattttaaa
      781 ccgcttttga ttaatgagat tccctcggga gaacgacatg aatttaaatt tgaattcgat
      841 gaaataaacg aacccagctc aagtggtagt ggtctgacac tctttgttag aggtaaggat
      901 ttcgactcca ttgaggagat actatttaat gaaggaaatg agaaagggtt gataaaagaa
      961 gagaatgtta caacattttt cacaaaagaa gagaatgtgt cataccaaca acataatgaa
     1021 gaccatgatc ttaaggaaca caattctaag aattgtggca tccctcctac atttgtgttt
     1081 gaatatattg aagaaaaaaa gaagcagatt tggcaactga tatcaaatga aaacaatgta
     1141 aaagggagag gaaacaacat gaaagaaaca gatacgtga
//
LOCUS       XM_071829511            1827 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein HOTHEAD-like
            (LOC139839448), mRNA.
ACCESSION   XM_071829511
VERSION     XM_071829511.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1827
                     /gene="LOC139839448"
                     /note="protein HOTHEAD-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839448"
     CDS             1..1827
                     /gene="LOC139839448"
                     /codon_start=1
                     /product="protein HOTHEAD-like"
                     /protein_id="XP_071685612.1"
                     /db_xref="GeneID:139839448"
                     /translation="MAINCNNNNNNLSLFIFLFCFCLASLIIPSQGDYKSWQTQYPFI
                     RKSSSFSSPSPPSSSSSSSSTSSVRQKGYDYIIVGGGTAGCPLAATLSQKYKVLLLER
                     GGVPFTNINVSLLANFHLTLADISPVSPSQFFMSNDGVYNARARVLGGGSSINAGFYS
                     RASESYVKRVGWDAKLVNESYPWVEKQVAHEPVFEPWQRAVRNGLLDVGISPDNGFTY
                     DHIYGTKVGGTIFDKYGRRHTAAELLSTANHQNIDVLIHAKVQKISFDTTGKKPRAVG
                     VVFKDENGVQHEAFISKRRGSEVIVTCGAIGSPQLLLLSGIGPKADLQKLNITVVHDN
                     KFVGKDMQDNPMNAIFVPFNRPVKQSLIETVGITKSGVYIEASSGYGQTKDNISCHHG
                     IASAEIGQLSTIPPRQRTHEAIETYKRHKKDIPYEAFHGGFILSKISFPQSKGELKLI
                     DTNVDNNPNVTFNYFSHKEDLKACVNGIRIMENLTRSKPFLNFTQCDSKTVNKLLNMS
                     VTANINMIPKHTNDTESLEQFCKDTVITIWHYHGGCHVGQVVNADYEVMGVHRLRVID
                     GSTFSESPGTNPQATVMMMGRYMGIKIIRERSRKAKGGVRVW"
     misc_feature    34..1809
                     /gene="LOC139839448"
                     /note="Protein HOTHEAD; Region: PLN02785"
                     /db_xref="CDD:215420"
ORIGIN      
        1 atggcaatca actgcaataa caacaacaac aacctctctc tcttcatttt tctgttctgt
       61 ttttgtcttg cctccctcat tatcccctct caaggggatt acaaatcttg gcaaactcag
      121 tatccattca tccgaaaatc aagctcattt tcgtcaccat caccaccatc atcatcgtca
      181 tcatcatcat caacatccag tgttagacaa aaggggtatg actacattat tgtaggtggt
      241 ggcacagcag gatgtccatt agcagccaca ttgtctcaaa agtacaaagt gttattactt
      301 gaaaggggtg gtgtaccttt tacaaatata aatgtgtcac ttttggcaaa tttccatctt
      361 acacttgcag acatttctcc tgtttctcct tcacagttct ttatgtctaa tgatggagtt
      421 tataatgcaa gagctagagt tttgggtggt ggttcttcta ttaatgcagg attttactcc
      481 cgagcaagcg aaagttatgt taagagagta ggatgggatg caaaattggt caatgaatca
      541 tacccatggg ttgaaaagca agttgctcat gaacctgtgt tcgaaccatg gcaaagagcg
      601 gtccgtaatg gtcttttaga tgttgggatt tcacccgata acgggttcac atatgaccat
      661 atctatggga caaaggttgg tgggaccatt ttcgacaagt atggtcgccg acacactgct
      721 gccgagttac tatctactgc gaaccatcaa aatatcgatg tattgattca cgccaaagtt
      781 caaaagattt cattcgacac tactggaaag aaaccaaggg cggttggagt agtttttaaa
      841 gacgaaaatg gagttcaaca cgaggcgttt atatctaaga ggcgggggag tgaagttatc
      901 gtgacgtgtg gagccattgg gagtcctcaa ctactattgc ttagcggtat aggaccaaag
      961 gccgatctac agaaactaaa cattacagtt gtgcacgata acaaatttgt cgggaaagat
     1021 atgcaagata accctatgaa cgcgattttt gttcctttca atcgaccggt caaacaatca
     1081 cttattgaaa cagtcgggat tacaaaatcc ggcgtgtaca ttgaagcgag cagcggttat
     1141 ggtcaaacta aagacaatat tagttgtcac catggtatcg cttcagctga gattggacaa
     1201 ctttcgacga ttcctccaag acaacgaaca cacgaagcga ttgaaacgta caaaagacac
     1261 aagaaggata tcccatatga agcatttcat ggaggtttta ttttgtcaaa aatatctttc
     1321 ccacaatcaa aaggggaact caaattgatt gataccaatg ttgacaacaa tccaaatgtc
     1381 acatttaatt attttagtca caaagaagat ttaaaggcgt gtgttaacgg gatccggatt
     1441 atggagaatc tcacgaggtc taaaccgttt ctcaatttca cacaatgtga ttctaagacc
     1501 gttaacaagt tgctcaatat gagtgtgact gcaaacatta atatgatacc taaacacacg
     1561 aacgatactg agtcacttga gcaattttgt aaggacaccg tgatcaccat ctggcattac
     1621 catggcgggt gccacgtggg ccaggtggtg aatgcggatt atgaagttat gggtgtacat
     1681 aggctacgag tcattgatgg atccaccttt tccgaatccc caggcacgaa tcctcaagca
     1741 acggttatga tgatgggcag gtatatgggt ataaagatca taagagaaag atcaagaaaa
     1801 gcgaaaggag gagtacgcgt gtggtga
//
LOCUS       XM_071829512            2407 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PSK SIMULATOR 2-like
            (LOC139839449), mRNA.
ACCESSION   XM_071829512
VERSION     XM_071829512.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2407
                     /gene="LOC139839449"
                     /note="protein PSK SIMULATOR 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839449"
     CDS             241..2085
                     /gene="LOC139839449"
                     /codon_start=1
                     /product="protein PSK SIMULATOR 2-like"
                     /protein_id="XP_071685613.1"
                     /db_xref="GeneID:139839449"
                     /translation="MGGVCTGGTMKRSSVAEYGSDKGSVGFSEKLKSIKSFGNHQMKK
                     NNNEYDDDDYAHHDDDDDDVTVNDDDFYGRRITSYDSGELMFSISRELKPSTPARVSK
                     VPHVSTIFGKAGSVGLEVLDTLGSSMSNLNAHSGFASNMASRGNKVSILAFEVANTIV
                     KGSNLMQSLSEESIQILKKEIMHSEGVQLLVSTDTKELLRIAASDKREELDVFSREVV
                     RFGDMCKDPQWHNLDRFFSRLDLDLITYKQLKEEAEFTMYELSNLAQYTSELYHEYHA
                     LDRFEQDYRRKLEEVESLHLPRKGESLTILHSDVKHQKKLVRNLKKKSLWSKRLEEIV
                     EKLVDVVTYIHQAIVEAFEENESNLTTNIREAHKKPETLGVAGLALHYANLVTQMDNI
                     AARPISLPPNMRDNLYNGLPVSVKAALRSRLQALDSKEVMTMPQIKAEMEKTLQWLVP
                     VATDTTKAHQGFGWVGEWANTGNEFGKKTAGSNNIIRLQTLYHADKQKMDRYILDLII
                     LLHRLISLVRFRDKLPKFAPPPTLIKANGKPQKVQISLEDRHLLEKVMKRRMLVPGIS
                     KSQEFVIVKKNRASVFASSRSMGSSPKRESGYTDVDMLDVLDGLGSTF"
     misc_feature    688..858
                     /gene="LOC139839449"
                     /note="Domain of unknown function (DUF3475); Region:
                     DUF3475; pfam11961"
                     /db_xref="CDD:432223"
     misc_feature    1354..1608
                     /gene="LOC139839449"
                     /note="Protein of unknown function (DUF668); Region:
                     DUF668; pfam05003"
                     /db_xref="CDD:428251"
     polyA_site      2407
                     /gene="LOC139839449"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttatagata aattataaac tagaaaaaaa agagtcaaac tctttgatct tcttattatt
       61 cttgttttat ttttgtttcc ttgctatcaa attccagtac tcataattct caacttctcc
      121 aaaattctca attaaaaacc ctaaattttc atttcatttg ttacattata ctatgttaaa
      181 caattgaatt atagtttaat ataataaata ttttaattta atttaattga ttgtgtaaat
      241 atgggaggtg tgtgtaccgg cgggacgatg aagcggagct cggtggcgga gtacggcagt
      301 gataagggta gtgtagggtt ttctgaaaaa ttaaaatcaa ttaaaagttt tggtaatcac
      361 cagatgaaga agaataataa tgagtatgat gatgatgatt acgcacatca tgatgatgat
      421 gatgatgatg ttactgttaa tgatgatgat ttttatggta gaaggattac atcctatgat
      481 tctggtgaat tgatgttttc tatttcaaga gaattgaaac catctactcc tgctagggtt
      541 agcaaggtac ctcatgtgag tacaattttt ggaaaagctg gtagcgtagg tcttgaagtt
      601 ttagatactt tgggtagcag tatgtcaaat ttgaacgcgc atagtggatt tgcatctaat
      661 atggcttcac gaggaaataa agtatctatt ttggcatttg aagtagctaa tacaattgtt
      721 aaaggttcta atttgatgca atcgctttct gaagaaagta ttcagatact taagaaggag
      781 attatgcatt cagaaggagt acaactttta gtgtctactg atacaaaaga gttgttacgt
      841 attgcagctt ctgacaagag ggaagaactt gatgtgttct caagagaggt tgttcggttt
      901 ggagatatgt gcaaagatcc acaatggcat aatctggatc gtttcttttc caggttggac
      961 ttggatctca taacttacaa acagctcaag gaagaggcgg aattcactat gtatgaacta
     1021 tccaatctcg ctcagtatac ttctgaatta taccatgagt atcatgcttt agatagattt
     1081 gaacaagatt accgacgtaa gctcgaggaa gtggaatctt tgcatcttcc tcgtaaagga
     1141 gagagtctca caatcttaca tagtgacgtg aagcaccaaa aaaaactcgt gaggaacttg
     1201 aaaaagaaat ctctttggtc taaaaggctg gaagagattg tggagaagct tgtagatgtt
     1261 gttacctata tccatcaagc aatcgttgaa gcttttgaag aaaatgagtc aaatttaacg
     1321 acgaatatca gggaggctca taaaaagccg gaaactttag gtgttgcagg tcttgcgtta
     1381 cattatgcca atttagtcac tcagatggat aacatcgcag ctcgacccat ctctttacct
     1441 cctaatatga gggacaattt atacaacggc ttgcctgtaa gtgtcaaggc cgctttacga
     1501 tctcgtttac aagcactcga ctctaaagaa gtgatgacga tgcctcaaat taaggcagaa
     1561 atggaaaaaa cactccagtg gctcgttcca gtagctacag atactaccaa agctcatcaa
     1621 ggtttcggat gggttggaga atgggcgaac acaggtaacg agtttgggaa gaagacagcg
     1681 gggagtaaca atattattcg tctccagacg ctatatcatg ctgacaaaca gaagatggac
     1741 cggtacattt tagatttaat tattttgcta caccgtctaa taagtctagt cagattcaga
     1801 gacaagcttc caaaatttgc gcctcctcct acattaataa aggctaatgg taaaccccaa
     1861 aaggtccaaa tctctttaga agatagacat cttctcgaaa aagtaatgaa acggagaatg
     1921 ttggttccgg gaattagcaa aagtcaagaa tttgttattg tgaagaagaa tcgagcttct
     1981 gtttttgcat cgagtcgaag tatgggaagc tctccaaaga gagaatcagg gtacacagat
     2041 gttgacatgt tggacgtctt ggatggttta ggttcaactt tttaagctgt cggtacatat
     2101 tcctaatgca agattctcat gtcaattcga cacatgggaa cattcctcag gaaataacat
     2161 tttggataag gttgagtaca caactacaca tccattacta tcgtttttac attcgttaca
     2221 tcaatgcatt taggttattt atatcatatg catgtaaata tatgtacgtc tcctgtatga
     2281 agtgggtgta gtagattata ggagaagatt attttaagta tggatagtgt ttattttatt
     2341 tatatttttg tacacaaatg atacataaat tcgttttgta cctatatcaa catccctagt
     2401 tttgctc
//
LOCUS       XM_071829513             687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839450), mRNA.
ACCESSION   XM_071829513
VERSION     XM_071829513.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..687
                     /gene="LOC139839450"
                     /note="uncharacterized LOC139839450; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139839450"
     CDS             1..687
                     /gene="LOC139839450"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685614.1"
                     /db_xref="GeneID:139839450"
                     /translation="MSEQTSLNCLDNFCLCVTDLYQKEYLRKPTAYDIERIYATHDTK
                     HGFKGMLRSIDCSNNDINVLNRSPLFDSIKNGTAPPSPFTVNGHDYTHGYYLADGIYP
                     DWATLIKVYSSPTDDPAAKFTWFQESARKDVERTYGVLQGRFNILRVPERAWKAKKIS
                     RILYACILLHNMIQEDNGFAITSLGKDYLRGNRGTREKEIHDKDVHSSIRADLNEHIW
                     NLPPNFRHTI"
     misc_feature    70..534
                     /gene="LOC139839450"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagtgagc aaacatcgtt aaactgttta gacaactttt gtttgtgtgt tactgatttg
       61 taccaaaaag agtatttacg aaaaccaact gcgtacgata ttgaacgaat atacgcaacg
      121 catgatacaa aacatggttt taagggcatg cttaggagca tcgattgttc caacaatgat
      181 attaatgtgt taaaccgatc accattgttt gattctatta agaacggtac cgctccacct
      241 tcaccattta ctgtaaatgg tcatgactac acacatggtt attatctcgc cgatggtatt
      301 tatccggatt gggctacact tattaaagta tattcatccc caaccgacga cccagctgca
      361 aagtttacat ggtttcaaga aagtgcacga aaggatgtcg agcgcactta cggtgttctt
      421 caaggtagat tcaatatatt acgtgtacct gaacgagctt ggaaagcaaa aaaaatctcc
      481 cgcattttat acgcttgtat tttattgcat aatatgatcc aagaggacaa cggttttgct
      541 ataacttcac tcggcaaaga ctatttaaga ggtaatcgag gaacacgaga aaaggaaata
      601 cacgacaaag atgtgcatag ttcaattcga gcagacttaa acgagcatat ttggaatctt
      661 ccaccaaatt tccgtcacac gatttag
//
LOCUS       XM_071829514            1840 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839452), mRNA.
ACCESSION   XM_071829514
VERSION     XM_071829514.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1840
                     /gene="LOC139839452"
                     /note="uncharacterized LOC139839452; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139839452"
     CDS             76..1605
                     /gene="LOC139839452"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685615.1"
                     /db_xref="GeneID:139839452"
                     /translation="MEGDRQQRILERELYQIEQIRQLDTEELEIEEVEHGHQSSDDDP
                     NDDRTFGGPLATSGFTFNTSLASMHSYLGEVEDTHNRLAFLDGGVILHVPLFYLEGVV
                     LFPEATLPLRVIQPNFVAAVDRALRQVEAPYTIGVVRVYRDDDNGRIRFSNTGTTAEI
                     RQYRRLDDGSINVVARGQQRFRLKRRWIEVEGAPCGEIQIIEEDLPLRTPQDAVGRLT
                     PLNNLSAANVAHSKSLVHENQDHDSDDSYESELSLTERRLHSSALSSRRYELFSDETS
                     SDDERLVFEPETKSEKSIRTLRFGNNSRVTRRNHSLHGVRECPRAYWPNWVYHMHDSY
                     CLAQRLSDMWRKIIGAPNMDVLVRKPGLLSFHVASKIPVSESTRQELLEIDGISYRLR
                     REIELLENFDQIKCRSCQTLIANRSDMLVMSTDGPLGAYVNPSGYVHEIMTLLKARGL
                     ALIGVATEEYSWFPGYAWTVAYCATCEYQMGWLFTTKNKALKPRSFWGIRSSQVADDM
                     H"
     misc_feature    352..>1272
                     /gene="LOC139839452"
                     /note="ATP-dependent Lon protease, bacterial type
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: Lon; COG0466"
                     /db_xref="CDD:440234"
     misc_feature    352..>690
                     /gene="LOC139839452"
                     /note="ATP-dependent protease La (LON) substrate-binding
                     domain; Region: LON_substr_bdg; pfam02190"
                     /db_xref="CDD:426647"
     misc_feature    1285..1587
                     /gene="LOC139839452"
                     /note="Thalidomide-binding C-terminal domain of cereblon
                     (CRBN) and similar protein domains; Region: CRBN_C_like;
                     cd15777"
                     /db_xref="CDD:276940"
ORIGIN      
        1 aggcccaaat cgaccactac ttgcatacaa catatatctg agggaaacta ttttgtaatt
       61 tggcgggtga atgaaatgga aggagatcgt cagcagagga ttctagaaag agaactgtat
      121 caaatcgaac aaattcggca gctcgatact gaagaattag agattgaaga ggttgaacac
      181 ggtcatcaat catccgatga cgatccaaat gatgaccgta cattcggtgg gcctttggcg
      241 actagcggtt ttacctttaa tacctctttg gcatccatgc attcttatct tggtgaggtt
      301 gaagatactc ataatagact ggctttcttg gacggtggtg tcatattgca tgtaccgcta
      361 ttttatcttg aaggtgtagt tttatttcca gaggcgactc ttcctctaag agtcattcag
      421 cctaattttg tagctgctgt ggatagggca ctgagacaag ttgaagctcc ttacactatc
      481 ggggtggttc gtgtttatag ggacgatgac aatgggagaa taagattttc aaacacaggg
      541 acaactgctg agattcggca atatcggcga ttggacgatg gttctataaa tgtagttgcc
      601 cgtggtcaac agcgatttcg tttgaaacgt cgttggattg aagttgaagg agcaccatgt
      661 ggtgagattc aaataatcga agaagatttg cctttgagga ccccacaaga tgctgttgga
      721 cgcttaacac cgttaaataa tctgtctgca gctaacgttg ctcattctaa atcactagtt
      781 catgaaaacc aggatcatga ttcagacgat agttatgaga gcgaattatc actaactgaa
      841 cggagattgc atagttcagc actttcttca cgtcgttatg aattgtttag tgatgaaaca
      901 agtagtgatg atgagaggct tgtgtttgaa cctgaaacta aatccgaaaa atctattcgc
      961 acattacgtt tcggcaataa tagtcgggtg actcgtagaa atcactcgtt acatggtgtt
     1021 agagaatgcc caagagctta ttggcccaat tgggtttacc atatgcatga ctcttattgt
     1081 cttgctcaaa ggttatcaga tatgtggaga aaaataatag gggcaccaaa tatggatgta
     1141 cttgtgagga aacctggtct actttcattt catgttgcaa gtaagattcc cgtttcagaa
     1201 tcaacgagac aagagcttct agagatcgat ggaatttctt ataggctgcg gcgtgaaatt
     1261 gagttgcttg aaaattttga ccaaattaaa tgtagaagtt gtcagacttt gatcgcgaac
     1321 cgtagtgaca tgttggtgat gtctacggat ggtcctcttg gtgcatatgt gaatccaagt
     1381 ggctacgtgc atgaaataat gacgcttctt aaagcaagag gcttggcact tattggtgta
     1441 gccacagaag agtatagttg gtttcctgga tatgcatgga cggtagcata ttgtgcaact
     1501 tgtgaatatc agatgggctg gcttttcacc actaaaaata aggcgcttaa gccgcgttca
     1561 ttttggggca tacggagttc tcaagtagca gatgacatgc actgaactgt attacaatat
     1621 catactgctt catgcgatgc ttttgtagcc atcaatgctt gtatgatttt cttctaatcc
     1681 gcatttttct ctctctcttt ttttagaaac tttctgtagt ttgttcttta gtgtgtagtt
     1741 gactaattca gactattgtg gttttgccac ccttagtttg aacttttaat agagtgtccc
     1801 tttgtttctg gtaacaaacc tgccgtgtta tacttgtaca
//
LOCUS       XM_071829515            4512 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter G family
            member 32-like (LOC139839453), mRNA.
ACCESSION   XM_071829515
VERSION     XM_071829515.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4512
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4512
                     /gene="LOC139839453"
                     /note="ABC transporter G family member 32-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 41 Proteins"
                     /db_xref="GeneID:139839453"
     CDS             74..4318
                     /gene="LOC139839453"
                     /codon_start=1
                     /product="ABC transporter G family member 32-like"
                     /protein_id="XP_071685616.1"
                     /db_xref="GeneID:139839453"
                     /translation="MWDSLGNLFVSTQDNDEEALQLAALQRSPTYVRARTSVFRNFEG
                     EFGLVDISKLDDEEKQVVLDKLVNTVNSNPELFFDRIRQRFENVDLKFPKVEIRFENM
                     KIDAFAHVGNRALPTLPNSVLNMTEDILRKLRIYPGRKKKMSILNNISGIIRPSRLTL
                     LLGPPSSGKTTLLLALAGRLGHDLKLSGRITYNGHELNEFMPQRTSVYVSQKDCHMAE
                     MTVRETLQFAEYCQGFGHKKDMIMELLRREKNAGIRPDEDLDIFIKTVVLGQNKTSLV
                     VEYLMKILGLDICAGTLVGDEMRKGISGGQMKRLTSGELLVGPSRVRFMDEISTGLDS
                     STTYQIIKYLKHVTRAFDETTVISLLQPDPETFELFDDLILLCEGQIVYQGPRNAAVP
                     FFASMGFHCPKRKNVADFLQEVTSVKDQEQYWSLEEHYKYVPVEQFVEAFQSNFLGNS
                     LSRELAIPFNRHHNHPAALSTSTYGVKRIELLKISFSWQLLLLKRDSFVYIFRLFQLM
                     LVVLVMTSVFFRSTMHHNSLADGGVYLGALYFAIVMILFNGFMEVPMLIAKLPVIYKH
                     RDLHFYPCWVYTLPSWLLSIPSSIIESGIWVAVTYYLVGFDPQLSRFLKQFLLYVSLH
                     QMSIGLFRVMGSLGRNMIVANTFGSFAMLVVMALGGFILSRDSIPSWWIWGYWFSPLM
                     YAQNAISVNEFLGNTWDKATANNTYIPLGTMLLKVRGLFPEDYWYWIGVGALLGYTIL
                     FNVLFTLFLTYLNPLGNHQVVIPREATKLQKKKHGILSAIIELKDYLHSPSFTGTEDQ
                     PQRGMVLPFQPLAMSFRNISYYVDIPGELKKRGLLNEKLQLLVDVTGAFRPGVLTALV
                     GVSGAGKTTLMDVLAGRKTGGHISGHIYVSGYPKNQETFARISGYCEQNDVHSPCLTV
                     HESLTFSAWLRLPSHIDATTRRDFVAEVMELVELNSLKGALVGLPGVNGLSTEQRKRL
                     TIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSVDIFES
                     FDELLLMKRGGKLIYAGPLGSGSHKVIQFFEGVKGVAKIRPGYNPAAWILEATSSTEE
                     NRLGVDFADIYRKSDLYLQNQELVENLSKPDRYSKFLRFPTKYSQIFLNQFVACLWKQ
                     NLSYWRNPQYTAVRFFYTVIISLMFGTMCWKFGAKRETQQDIYNAMGSMYAAVLFIGI
                     TNAASVQPVVYVERSVSYRERAAGMYSALPFAFAQVAIEFPYVFIQSLAYSVIFYFLA
                     AFEWNVLKLFWYIYFMYFTLLYFTFFGMMTIAVTPNHNIAAIVAAPFYMLWNLFSGFM
                     ITRMRLPIWWRWYYWANPVAWSLYGLLTSQYGDVNEPVKLADGSTSVPLRQFLNDQFG
                     YKHEFLGVAATAVVGFCLLFAVTFAFTMKSFNFQRR"
     misc_feature    104..4315
                     /gene="LOC139839453"
                     /note="ABC transporter G family member; Provisional;
                     Region: PLN03140"
                     /db_xref="CDD:215599"
ORIGIN      
        1 aaatccattt ccataaatcc ctcacaattc tcaaccatct caatatggtt tgctcaatca
       61 attctctact acaatgtggg attcacttgg aaacttgttt gttagtacac aagataacga
      121 tgaagaagcg ttacaactgg ctgcattgca gcgttcacct acttatgtta gggctcgaac
      181 ttcagttttt aggaactttg aaggtgaatt tggtcttgtt gatataagta aacttgatga
      241 tgaagaaaaa caggttgtgt tggataagtt ggttaatacg gttaattcga atcctgagct
      301 gttttttgat aggattcgac aacgattcga aaatgttgat ctgaaatttc caaaagtcga
      361 gattcgattt gaaaacatga agatagatgc attcgcgcat gtcggaaaca gagcattacc
      421 caccttacca aattctgtac ttaacatgac tgaggatatc ttgaggaaat taaggattta
      481 tccggggcga aaaaagaaaa tgagtatact aaataatatc agtggtatta ttagaccttc
      541 aaggttaact ctccttttgg gtcccccaag ctctggtaaa acgacactgc ttttggctct
      601 tgctggacgc cttggacatg atctaaagtt gtctggaaga atcacatata atggacatga
      661 actaaacgaa tttatgcctc aacgaacttc tgtatacgtc agtcagaaag attgtcatat
      721 ggctgaaatg acagtgagag aaactcttca atttgcagaa tattgtcaag gttttggtca
      781 taagaaagat atgattatgg aacttttgag aagagaaaag aacgctggaa ttcgaccaga
      841 tgaagatctt gatatattta taaagacagt agtgcttgga cagaataaga cgagtcttgt
      901 ggtagaatac cttatgaaga ttttaggatt ggatatatgt gcgggaacac tagtaggaga
      961 cgaaatgcgt aaagggatat ctggcggtca aatgaagcgg ttgacttcgg gagaattgtt
     1021 agtggggcca tcacgggttc gttttatgga tgaaatatca actgggcttg atagttcaac
     1081 tacttatcaa atcattaaat atcttaaaca tgtaactcgt gcgtttgatg aaacaaccgt
     1141 catctctttg ctgcaacccg acccggaaac atttgagttg tttgatgacc tgattttact
     1201 atgcgaaggt caaattgttt atcaaggacc tcgtaacgct gctgtgccgt tttttgcttc
     1261 tatgggtttt cattgcccga aaaggaaaaa tgtagccgat tttctgcaag aagtcacatc
     1321 agtaaaagat caagaacaat attggtcact tgaagagcat tacaaatatg ttccagttga
     1381 acagtttgta gaagcatttc aatcaaattt cctcggtaat tcattatcac gagaactcgc
     1441 cattccgttt aacagacatc ataatcatcc cgcagctcta tcgacaagta cgtatggcgt
     1501 taaaagaatc gagctactca aaattagttt ctcgtggcag ctgctacttt taaaacgtga
     1561 ttcatttgtt tacatcttca gattatttca gcttatgttg gtagttttag taatgacgag
     1621 tgtattcttt cgctcaacaa tgcatcataa ttcacttgcg gacggtggag tttatctcgg
     1681 tgctctttac tttgcaatag ttatgatttt gtttaacggt tttatggagg tcccgatgtt
     1741 gatagctaaa cttcccgtaa tttataagca tcgagatttg cacttttatc catgttgggt
     1801 ttacaccctt ccttcgtggc ttttaagtat cccgtcatca attatagaat ccggtatatg
     1861 ggttgccgtg acatattatc tcgttggctt tgatccacaa ctttctagat tcttgaaaca
     1921 gttcttgttg tacgtctcgt tgcaccagat gtcaatcggt ctttttcgtg tgatgggatc
     1981 attaggcaga aatatgatcg ttgccaacac gtttggatcg tttgcaatgc tggttgtcat
     2041 ggcacttgga gggttcatac tttctcgaga tagcatccct tcttggtgga tatggggtta
     2101 ctggttttct cctttaatgt atgctcaaaa cgcaatttcg gtcaatgaat ttttggggaa
     2161 tacatgggat aaggcaactg cgaacaatac ctacatacca ttagggacga tgctactgaa
     2221 agttcgaggc ttatttccag aggattattg gtactggata ggagttggtg ctttgctcgg
     2281 ttacacgatt ctatttaacg ttctcttcac attattcctt acatatctta atcctcttgg
     2341 aaaccatcaa gtggtcatac ctcgcgaggc taccaagttg cagaagaaaa aacacgggat
     2401 tttatcagct attatcgagc tgaaagatta cttacactca ccttcattta ctggtaccga
     2461 agaccaaccc caaagaggaa tggttcttcc atttcagcct ctcgctatgt ctttccgcaa
     2521 cattagttat tacgtcgaca tcccagggga attaaagaaa cgaggtttgt taaatgaaaa
     2581 gctgcaattg ttggtcgatg taaccggagc gttcaggcca ggtgtcctaa ccgcattggt
     2641 cggggtcagt ggtgctggta aaactacact tatggatgtt ttagcaggtc gaaaaacagg
     2701 tggacatatt tcgggacata tatatgtttc cgggtaccct aaaaaccaag aaacttttgc
     2761 acgaatatcc ggttactgcg agcaaaacga cgttcactcc ccgtgtttaa ccgttcacga
     2821 gtcgttaacg ttttccgctt ggcttcgatt accgtctcat atcgatgcaa caacacgaag
     2881 agactttgta gccgaggtta tggaacttgt agaactcaat tcacttaagg gtgcgttagt
     2941 tggtttaccg ggtgttaacg gattatcaac ggagcaacga aaacggttaa cgattgcggt
     3001 tgaacttgtt gcgaatcctt cgattgtgtt tatggatgag ccgacttcgg gattagatgc
     3061 tcgagctgct gccattgtta tgaggacggt cagaaatatt gtgaatactg gacggacaat
     3121 tgtttgcaca attcatcagc caagcgttga tatttttgaa tcgtttgatg agcttttact
     3181 tatgaaacgt ggcgggaagc tcatttatgc tggtcctttg ggctccgggt cccacaaagt
     3241 tatccaattt tttgagggtg taaaaggagt tgctaaaata agaccagggt ataaccctgc
     3301 tgcttggatt cttgaagcta cttcatcaac agaagaaaac cgtcttggcg ttgattttgc
     3361 cgatatttac cgcaaatccg atctatattt gcaaaaccaa gaactagttg aaaacttaag
     3421 caaaccagat cgatattcga agtttttaag attcccaacc aaatattctc agatattttt
     3481 aaaccagttt gttgcatgtc tttggaaaca aaatctgtcg tactggcgga acccgcaata
     3541 tacagctgta cgatttttct acaccgtcat catttcatta atgttcggga caatgtgctg
     3601 gaagtttggt gctaaaaggg agacacaaca ggacatatat aacgcaatgg gatctatgta
     3661 cgctgccgtt ttatttatcg gaattacaaa cgcagcttcc gttcaaccag tcgtgtatgt
     3721 cgaaagatca gtttcttacc gagagagggc tgcagggatg tattccgctt taccgttcgc
     3781 atttgcacag gttgctatag agtttccgta cgtgtttatt cagtcgcttg cttacagcgt
     3841 tatcttctac tttttggctg catttgagtg gaacgtattg aaactctttt ggtacatata
     3901 ctttatgtat ttcaccttat tatacttcac cttttttgga atgatgacaa ttgcggttac
     3961 acccaaccat aatatagccg ccattgttgc cgcaccgttt tatatgttgt ggaacctttt
     4021 cagtggattt atgatcactc gaatgaggct tccgatatgg tggagatggt actattgggc
     4081 gaatccagta gcctggagtt tatatggact attgacgtca caatatggag atgtaaatga
     4141 acccgtaaaa cttgcagatg gttctacttc cgtcccgtta cgccaatttc tgaacgacca
     4201 atttggttac aaacatgaat tcttaggtgt tgccgccact gcagtcgttg gtttttgttt
     4261 actgtttgcg gtgacatttg cgtttactat gaaatccttc aactttcaaa ggagatgagg
     4321 cttaatagac aagatcaaat tatgcagttt tgtaacctta tgatgataca gatgtccggt
     4381 gaagcatcaa acaaagccga tatatgtata cagatgttgt agcatttgtg aagtgtatat
     4441 tttctaattt agttcgagta tatgaatact tgatgctata attatacaaa tacaagttaa
     4501 acttttctta ca
//
LOCUS       XM_071829516            1750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-glycosyltransferase
            85C1-like (LOC139839454), mRNA.
ACCESSION   XM_071829516
VERSION     XM_071829516.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1750
                     /gene="LOC139839454"
                     /note="UDP-glycosyltransferase 85C1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:139839454"
     CDS             163..1623
                     /gene="LOC139839454"
                     /codon_start=1
                     /product="UDP-glycosyltransferase 85C1-like"
                     /protein_id="XP_071685617.1"
                     /db_xref="GeneID:139839454"
                     /translation="METEPLIDQKRPHVVFIPFPAQSHIKCMLKLAKLLHYKGIHITF
                     INTKSNHARLVKSGGIHDIDVVPGFRFKTVQDSPTCDAEDDGVEHTPTNLFELMTYLK
                     ENFYDSFLDLISSLETPVTCIICDGFMTFTNSIQAAEKLEVPIFLFWTMAACGFMGFY
                     QSKVLVEKGLVPLKDESYLTNGYLEMEIDWIPGMEGIRLKDLPEFIRATSPNDIAFTF
                     LLEVAQKADNVSRMIFHTFEDLEASLIEEIRSVFPNVYNVGPLQLLLNQKQESKSSEF
                     SGYSLRHEEPECVQWLESKEPNSVVYVNFGSIAVMSLQDLVELGWGLVNSKYEFLWII
                     RNDLVDGKPSVLPKELEDVINEKGFVGSWCTQEEVLNHRSIGGFLTHGGWGSIIESLS
                     AGVPMICCPFLGDQLTNCRQMCKKWEIGMEIGKNMKRDEVEKLVRMLMEGEEGKIMSN
                     KALEWKMMAEMATGSCGSSSLDIEKLVDEITNLPKT"
     misc_feature    196..1557
                     /gene="LOC139839454"
                     /note="UDP-glycosyltransferases and similar proteins;
                     Region: GT1_Gtf-like; cd03784"
                     /db_xref="CDD:340817"
     misc_feature    order(229..234,238..240,772..774,781..786,796..798,
                     919..921,1081..1083,1303..1305,1309..1311,1315..1320,
                     1327..1329)
                     /gene="LOC139839454"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(229..231,1081..1083,1303..1305,1309..1311,
                     1315..1320)
                     /gene="LOC139839454"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    232..234
                     /gene="LOC139839454"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 tacattacag gatgcttctc tttctaatcg acatattagt cttacacaaa ttaaattact
       61 ataaatcaga tacactgata cacatactat taagccctat cttaggtaag tagtatttgt
      121 ttatttatct cgtggcaaat taacagaaac acacacatcg acatggagac agagccctta
      181 atagatcaga aaaggcctca tgtagtgttc ataccatttc cagcacaaag ccacatcaag
      241 tgtatgctca aactagccaa actactgcac tacaagggca tacacataac tttcatcaac
      301 actaaatcaa accatgcgcg actcgtgaaa tctggtggga ttcatgatat cgatgtggtt
      361 ccaggttttc gatttaaaac ggttcaggat agtccaactt gtgatgcaga ggatgatggt
      421 gtcgagcata ctccaactaa tttatttgaa ctcatgacct acctgaaaga aaatttctat
      481 gattcatttc ttgatctcat atctagcctt gaaactccgg taacatgtat catttgtgat
      541 ggtttcatga ctttcacaaa ttcaattcag gctgctgaaa agctcgaggt tcctatcttt
      601 cttttttgga ccatggctgc ttgtggattc atggggtttt atcagtcaaa agttctagtg
      661 gagaaaggac tagtcccact taaagatgaa agttatttga caaatggtta tcttgagatg
      721 gaaatagatt ggattccagg aatggaaggt atccgtttaa aggatttacc agagttcata
      781 cgagccacta gtccgaatga tattgcattt acatttctcc tagaagttgc tcaaaaagcc
      841 gataacgttt cgcgtatgat cttccacact ttcgaagacc tagaagctag tcttatagaa
      901 gagattagat ccgtctttcc taacgtctat aatgttggac cacttcaatt acttttgaat
      961 cagaagcaag aaagcaaaag ctcggaattt agtggatata gtttacgtca tgaagagccc
     1021 gagtgtgttc aatggctaga gtcgaaagag cctaattctg tagtgtatgt caactttgga
     1081 agtatagcag taatgtcgtt acaagatctt gtagaactag gttggggact tgttaacagc
     1141 aaatatgaat ttttatggat tataagaaat gatttggttg atgggaagcc tagtgtttta
     1201 cctaaagaat tagaggacgt gataaacgag aaaggatttg ttggaagttg gtgtacacaa
     1261 gaagaggtct tgaaccatcg gtcgattggt gggttcttga ctcatggtgg gtggggttca
     1321 atcatcgaga gcttgtcggc tggggtgcct atgatttgtt gtccattttt gggtgaccag
     1381 ctaacgaatt gtcgacaaat gtgtaagaaa tgggagattg gtatggaaat tgggaagaat
     1441 atgaagaggg atgaagtgga gaagcttgtg aggatgttaa tggaaggtga agaaggtaaa
     1501 ataatgagca ataaagcttt ggagtggaag atgatggcgg aaatggctac gggttcttgt
     1561 ggatcatcgt ctttagatat agagaaactc gttgatgaaa tcactaactt acctaaaacc
     1621 tagattttcc ttatgtattt gactacttcg gtcattctat tcatacatat ctactttggt
     1681 tgatgtttag aaacaatttc tagtagttta aacttatttt aataataagg cggttagaaa
     1741 attggcaaag
//
LOCUS       XM_071829517            2730 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides endoplasmin homolog
            (LOC139839455), mRNA.
ACCESSION   XM_071829517
VERSION     XM_071829517.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2730
                     /gene="LOC139839455"
                     /note="endoplasmin homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139839455"
     CDS             65..2518
                     /gene="LOC139839455"
                     /codon_start=1
                     /product="endoplasmin homolog"
                     /protein_id="XP_071685618.1"
                     /db_xref="GeneID:139839455"
                     /translation="MRKWTLPSVLFLLCLLFLLPDQGRKLQANAESDSDELVDPPKIE
                     DKLGAVPHGLSTDSDVAKREAESMSRKSLRSNAEKFEFQAEVSRLMDIIINSLYSNKD
                     IFLRELISNASDALDKIRFLSLTDKEVLGEGDDTKLEIQIKLDKENRILSIRDRGVGM
                     TKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHND
                     DIQYVWESKADGAFAISEDTYNEPLGRGTEIRLHLREEAGEYLEESKLKDLVKKYSEF
                     INFPIYLWATKEVDVEVPAEEDDSSDDEEKPESTDESEEKEEEDSDKEEDEQKPKTKT
                     IKETTYEWERLNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDEKPMAWSHFNAEGDV
                     EFKAVMFVPPKAPTDLYESYYNANKSNLKLYVRRVFISDEFDELLPKYLSFLLGLVDS
                     DTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDESHDKDKKEVEETKDD
                     DEKRGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFETTKSDGKLTSLDQYISRMK
                     SGQKDIFYITGSSKEQLEKSPFLERLKKKNFEVILFTDPVDEYLMQYLMDFEDKKFQN
                     VSKEGLKLGKDSKDKEVKESFKELTKWWKDTLASENVDDVKISNRLADTPCVVVTSKY
                     GWSANMERIMQSQTLSDASKQAYMRGKRVLEINARHPIIKELRERVVKSPEDASVKTT
                     AQLMYQTALMESGFMLSDPKDFASRIYDSVKTSLNISPDASVEEEEEVEEVTEVESSP
                     KDETDSTPTEEETDIKDEL"
     misc_feature    323..895
                     /gene="LOC139839455"
                     /note="Histidine kinase-like ATPase domain of human
                     cytosolic Hsp90 and its homologs including Escherichia
                     coli HtpG, and related domains; Region:
                     HATPase_Hsp90-like; cd16927"
                     /db_xref="CDD:340404"
     misc_feature    order(326..331,338..340,350..352,581..583,650..652)
                     /gene="LOC139839455"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340404"
     misc_feature    order(383..385,395..400,404..409,416..418,521..523,
                     527..529,533..535,539..544,566..571,575..595,644..664,
                     698..700,704..706,800..805,809..811)
                     /gene="LOC139839455"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340404"
     misc_feature    order(569..571,662..664)
                     /gene="LOC139839455"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340404"
     misc_feature    839..2491
                     /gene="LOC139839455"
                     /note="Hsp90 protein; Region: HSP90; pfam00183"
                     /db_xref="CDD:459703"
     polyA_site      2730
                     /gene="LOC139839455"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaatctcaca taaaacacac acaaacatta gattcataaa ctgtgtatct atagatcgat
       61 cgcaatgagg aagtggactc ttccgtccgt attatttctg ttatgtctgt tatttcttct
      121 tccagatcaa ggtcggaagt tgcaagctaa cgcagagtcg gattcggatg aattggtgga
      181 tcctcccaag attgaagata agcttggtgc tgttcctcat ggtttatcaa ctgattcaga
      241 tgttgccaag agagaagctg aatcgatgtc gagaaagagc cttcgcagca atgcggagaa
      301 gtttgagttt caggctgaag tatctaggct tatggacatc attatcaact ctctttatag
      361 caacaaggac attttcttga gggagttaat ttccaatgca tctgatgcgt tggacaaaat
      421 tagattcctt tctcttactg acaaggaggt tttgggtgaa ggtgatgata ccaagcttga
      481 gatccagatt aagttagaca aagaaaacag gattctttcc attcgtgata gaggtgttgg
      541 tatgacaaag gaggatctta ttaagaactt gggaacaatt gccaagtccg gaacttcagc
      601 ttttgtggag aaaatgcaga caggaggaga tcttaacctc attggtcaat ttggtgttgg
      661 attttactct gtgtatcttg ttgctgacta tgtagaagtg atcagcaaac acaacgatga
      721 cattcaatat gtgtgggagt cgaaggcaga tggcgcattt gcaatttctg aagatacata
      781 caatgagccc cttggccgtg gtactgaaat cagattgcac cttagagagg aagctgggga
      841 atacctagaa gagtcaaagt tgaaggattt ggtaaagaag tattctgaat tcattaactt
      901 cccgatatac ctgtgggcca ccaaagaagt agatgttgag gtgcctgccg aagaagatga
      961 ctctagtgac gatgaagaaa aacccgagtc tactgatgag agtgaagaga aagaagagga
     1021 agattctgac aaagaggaag atgaacaaaa accgaagacc aaaaccatca aagagacaac
     1081 atatgagtgg gaacgtttga atgatgttaa agctatctgg ttaagaagtc cgaaggaggt
     1141 gaccgaggaa gagtacacaa aattctacca ctctctagct aaggattttg gtgatgagaa
     1201 gccaatggca tggagtcact ttaacgcaga gggtgatgtt gagttcaagg cagttatgtt
     1261 tgtgcctcca aaggctccta ctgatctgta cgagagttac tacaatgcaa acaaatccaa
     1321 cttgaagctc tacgttagaa gagtattcat ctcagatgaa tttgacgagc ttttgcctaa
     1381 atatttaagt ttcttgttgg gtcttgttga ttctgacacg ttaccactta atgtatctcg
     1441 agaaatgctt caacaacaca gcagcttgaa aacaatcaag aagaaactta tcagaaaggc
     1501 ccttgacatg atccgtaaac ttgctgaaga agaccctgat gaatctcatg ataaagacaa
     1561 gaaagaggtg gaagaaacta aggatgatga tgagaagaga ggccaatata ccaagttctg
     1621 gaacgaattt ggaaagtcga ttaaacttgg tatcattgag gatgcagcta ataggaaccg
     1681 tttggccaaa cttctcagat ttgagaccac gaaatcagat ggcaaactaa catcacttga
     1741 tcaatacatc tcaagaatga aatctggaca gaaggatata ttctacatta caggcagcag
     1801 caaggaacag ctcgagaaat cacctttcct cgagaggcta aaaaagaaaa actttgaggt
     1861 gattcttttt actgatcctg tggatgaata cctgatgcaa tacttgatgg attttgaaga
     1921 caagaaattc caaaatgttt ccaaggaggg tttgaaacta ggcaaggatt caaaagacaa
     1981 agaagtcaaa gaatcattca aagagttgac caagtggtgg aaggatacac ttgcgagcga
     2041 aaacgtcgat gatgtaaaga tcagtaaccg tttggctgac accccttgtg tagtcgtgac
     2101 ctccaaatac ggatggagtg ctaatatgga acgaatcatg caatctcaaa ctctatctga
     2161 tgccagcaaa caagcataca tgcgtggcaa aagggtactt gaaattaacg cacgacatcc
     2221 aatcattaag gagcttcgtg agagagtcgt aaagagccca gaggatgcta gcgtaaagac
     2281 aaccgctcaa cttatgtacc agacggcgtt gatggaaagt ggatttatgc taagtgaccc
     2341 taaggacttt gcgtcgcgta tatatgattc cgtaaagaca agtctaaata taagtccaga
     2401 tgcatcagtt gaggaagaag aggaagttga agaagtcacc gaggttgaga gcagcccgaa
     2461 agacgaaact gattccacac ccaccgaaga agaaacggat attaaagacg agttataggt
     2521 ttttttgtag taatttctgt ttttaaacgt ttgactcgca ttagatttcg atgagacctt
     2581 ggtttcggta atctagacat tgagacgctg tatttgctct cggcctggaa aatgtaatac
     2641 ataaagctta gctggaattt tgtgtcggtt cggattgaac aaatgcagaa cagtttgtct
     2701 tcaagtaaaa ctatatcatt tacatcttca
//
LOCUS       XM_071829518            3072 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839456), mRNA.
ACCESSION   XM_071829518
VERSION     XM_071829518.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3072
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3072
                     /gene="LOC139839456"
                     /note="uncharacterized LOC139839456; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139839456"
     CDS             24..2933
                     /gene="LOC139839456"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685619.1"
                     /db_xref="GeneID:139839456"
                     /translation="MKFFIFLNIFLIYLNLSNALSDIDALMKIKTSLIASNASTALHN
                     WKLTNSHCSFTGVTCDQNARVTALTISNVPLFGTIPPEIGILNKLQNLTLVSDNLTGE
                     LPLELRNLTSIKFINISSNLFFGEFPVTIMANWTQIEAFDIYNNNFTGKLPVEFVNLQ
                     NLEILYLGGNFFTGEIPEIYSEFKKLRVLGLQANELTGVIPGSLSKISTLTHLLLGYF
                     NIYEGGIPFEFGGFKSLQLLDLSSCNLTGEIPASLGNLKKLHTLFLYFNNLTGEIPRQ
                     LSEMVSLMSLDLSNNNLSGGIPDSFSELKNLTLISLFHNQLAGPLPSFIGDLPNLEVL
                     QIWENNFTFELPENLGRNGRLLMLDVAGNHLTGPVPKDLCKGGKLRLLILMENYFFGP
                     LPESLGSCNSLTKIRITKNFINGTIPPGIFNLPELTMLELDDNYLTGQLPDTMLGRSL
                     QSVSISNNRIAGNVPHAFGDLANLTTLSLQSNKFTGEIPQEILRLNKLYKINMSDNNL
                     SGEIPSSIAMCVQLTSIDLSRNNLFGEFPNGILSLFNLNILNVSRNRICGEIPDKLGH
                     MKSLTVLDLSYNQFSGIVPIDGQLKDFGDEIFTGNPDLCLSQMAHCPVVSRNRKKHYS
                     ITTSRVVIIVIAIITILLLLMLTFIKMNNKRIERSKVWKLTTFQRLDLKVEDVLECLK
                     DENIIGKGGAGIVYRGSMANGVDVAIKRLMGRNHGFDAEIQTLGKIRHRNIVRLLGYV
                     SNRVNNLLIYEYMSHGSLGEILHGSKGAHLQWETRYRIAVEAAKGLCYLHHDCSPMIL
                     HRDVKSNNILLDSDYEAHVADFGLAKFLRDSGASESMSSIAGSYGYIAPEYAYTLKVD
                     EKSDVYSFGVVLLELIAGKKPVGEFGDGVDIVRWVRETISEHYEKSDTTAVQAVLDVR
                     LKVYPLGSVINLFKIAMNCVEDESMDRPTMREVVHMLTNPPQLLEQVQQSCLLTP"
     misc_feature    24..2876
                     /gene="LOC139839456"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    336..434
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    435..506
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    507..578
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    579..650
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    651..725
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    726..797
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    798..869
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    870..941
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    942..1013
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1014..1076
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1086..1301
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1302..1370
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1371..1442
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1443..1514
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1515..1586
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1587..1652
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1659..1730
                     /gene="LOC139839456"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 ataaaccaat aaaaaaaaaa aaaatgaaat ttttcatttt tctaaatatt ttcttaattt
       61 acctcaactt gtcaaatgca ttatcagata ttgacgcttt aatgaagatc aaaacttcat
      121 taatagcatc aaacgcatct actgctttac acaactggaa acttacaaat tcacattgtt
      181 catttaccgg cgtcacgtgc gaccaaaacg cacgtgtaac ggcgttaaca atatcaaacg
      241 ttcctttatt cggaaccatc ccacctgaaa tcggaatatt aaacaaacta caaaacctca
      301 ctttagtatc cgataatctg acgggtgaat taccactcga gctgcgtaat ttaacctcga
      361 ttaaattcat taacatctca tcgaacttgt tcttcggcga gtttcctgtt acgatcatgg
      421 ctaactggac gcaaatcgaa gcgtttgata tctacaacaa taatttcacc ggaaaattac
      481 cagttgaatt tgttaattta caaaatttgg aaattttgta cctaggaggt aattttttta
      541 ccggtgaaat tccggaaata tactcggaat ttaaaaagtt acgcgttttg gggttacaag
      601 caaacgaatt aacaggagtg attccaggaa gtttatcgaa aatatctacg cttactcatt
      661 tgttgttagg ttatttcaat atttatgaag gtggaatacc gtttgaattt ggcggattta
      721 aatcgttaca attactcgat ctttcgagct gtaatttaac gggtgaaata ccggcgagtt
      781 taggtaattt gaagaagttg catactttgt ttttgtattt taataattta actggtgaga
      841 ttccacgtca gctatcggaa atggttagtt tgatgtcgct ggatttgtcg aataataatt
      901 tgagtggtgg aataccggat agtttttcgg agttgaagaa tttgacgttg attagtttgt
      961 ttcataatca acttgccgga cctcttccgt cgtttatcgg tgatttaccg aatctggagg
     1021 tgttacagat atgggagaat aattttacgt ttgaattgcc tgagaatctt ggccggaatg
     1081 gtaggctgct tatgctagat gtcgccggaa accatctcac tggacctgtg ccaaaagatc
     1141 tgtgcaaagg aggcaagtta cgacttttaa ttttaatgga gaattacttt tttgggcccc
     1201 tacccgaatc ccttggcagc tgcaactcat taaccaaaat tcgcatcaca aaaaacttca
     1261 tcaacggtac tattccaccc ggtatcttca acttacccga actcacaatg ctcgaactcg
     1321 acgacaacta tctcaccgga caacttccag acacgatgct cggtcgatca cttcaaagcg
     1381 tttcgatttc caacaatcgt atcgcgggca atgtacctca cgcttttggt gacttggcca
     1441 atttaacaac tttatctctt caatcaaata agtttactgg tgaaattcct caagagattt
     1501 tgaggttaaa taagttgtac aagattaaca tgagtgataa taatctaagt ggtgagatac
     1561 cgagttctat agctatgtgt gttcagctta cttcgattga tttaagtcga aacaatttgt
     1621 ttggcgagtt tcctaatggg attctaagtt tgttcaattt gaacatactt aatgtttcta
     1681 ggaatcgaat ctgtggtgag ataccagata agttgggtca tatgaaaagt ttaacggttt
     1741 tggatctttc gtataatcag ttttcgggta tcgttccaat cgacggtcag ttaaaagatt
     1801 tcggcgacga gatatttact ggtaaccctg atctatgttt atcgcaaatg gctcattgtc
     1861 ctgttgtgtc aagaaatcga aagaagcact attcgattac aacgtcgagg gttgtgataa
     1921 tagtaatcgc tataatcacg atccttttgt tgttgatgct aacattcatc aaaatgaata
     1981 ataaacgaat tgaaagatca aaagtgtgga agttgacgac gttccaaagg ctagatctta
     2041 aagtcgaaga tgttcttgaa tgtttgaaag acgaaaacat tattgggaaa ggtggtgcgg
     2101 gaattgtgta ccgtggatca atggctaatg gtgttgatgt agcgattaaa cggttaatgg
     2161 gaaggaacca tgggtttgat gcggagatac aaacgttagg gaaaattagg cataggaata
     2221 ttgtgagatt gcttggatat gtgtcgaatc gtgtaaacaa tttgttgatt tacgagtaca
     2281 tgtctcatgg gagtttaggt gagattttgc acgggtcgaa aggtgcgcat ttgcagtggg
     2341 aaactaggta caggattgcg gttgaggcag ctaaaggatt gtgttacctt caccatgatt
     2401 gctcgccaat gatattacat agagatgtga agtcaaataa tatactgttg gattctgatt
     2461 acgaagctca tgttgctgat ttcgggctcg ctaagttctt gagggatagt ggtgcttcag
     2521 aatccatgtc ctctattgct ggatcttatg gttacattgc accagagtat gcgtacacat
     2581 taaaagtgga tgaaaagagc gacgtgtata gttttggggt ggtgctgctt gaactcatag
     2641 ctggaaagaa gccggttggg gaatttgggg atggggtaga catagtgagg tgggtccggg
     2701 agacaatatc agagcactat gagaagtcgg atacaacagc agtgcaagcg gtgttggacg
     2761 taaggctcaa agtgtatcca ttaggaagtg tgataaacct tttcaaaatc gcaatgaatt
     2821 gtgtcgagga tgagagcatg gatcgaccaa caatgaggga agtcgttcac atgttaacga
     2881 atcctcctca attgctagaa caagtacaac agtcgtgcct gctaactcct tgaaaatgta
     2941 gtttgtattg ttatgttttg atgggaatac tgtaataaaa atttgatact ttattgggtc
     3001 aaaaatacaa tgtataataa aataattata tatttatata tttaatattt atatttatat
     3061 atagcttgta tg
//
LOCUS       XR_011756949             364 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839457), ncRNA.
ACCESSION   XR_011756949
VERSION     XR_011756949.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..364
                     /gene="LOC139839457"
                     /note="uncharacterized LOC139839457; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839457"
     ncRNA           1..364
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839457"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839457"
ORIGIN      
        1 caatcttagg attgaaaatt ttgaggtcga aattacaaac cctagggctc cgtcttatgc
       61 tttttgttaa cgttcattgc ttgcacgatt tcagtttcat ttgctggctt catcatggca
      121 gctgttccaa cactatatcc aggagatctc tcatggggtt aacaagactg ctcaagttgt
      181 gcaagcagca gaagctggag tacgacaaat tggttctttg ctcgacataa aactatgtag
      241 gttctttgga agtagtctct ttacccgcgg atactggcac tactctaagt taacataggc
      301 tagtggatat attatattta cgaaagaaat tttttccttc tacatgtata tgttagtgaa
      361 agac
//
LOCUS       XM_071829519            1551 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839458), mRNA.
ACCESSION   XM_071829519
VERSION     XM_071829519.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1551
                     /gene="LOC139839458"
                     /note="uncharacterized LOC139839458; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839458"
     CDS             168..1355
                     /gene="LOC139839458"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685620.1"
                     /db_xref="GeneID:139839458"
                     /translation="MSRCFPYPPPGYFKDGATTSEALIESIKLQKENDKAKAKAERKR
                     EKREKKDKKPKDQNKSKDEKKVKSQNYPNEHPHDSHKVLPKVEVDSKKSELKTELLER
                     SDVTEEHGQPHKPSYSSDSSTQNSNKRKFDDASLSEVATAHGKPIKIRLLKKQKESDS
                     VKDTNRPSVTFACNGVNETSVSHNRTGVSVTSGRENNAVNMLETKNIGLNEHQFGQKK
                     FATCSARPSFPLTNQTPNGHSIKTNVPALSQLILERPVLAQCQLSTEISGPKTTVPSG
                     AEKRSMSEVSVPVKNGPSISEKKTDRIPQKVAPTRHEKKMLKKQSKYEKLVRCWVPPV
                     VEAQLPVDEEVWLSRRVETIKSSSRNDAETCRESAASLLWQPFAHFLVEADMHALPYT
                     VPF"
     polyA_site      1551
                     /gene="LOC139839458"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctaattttta aatttgttaa aagaccgaga gatccgtctt ccgggttgtt tagatcgtca
       61 attggtctaa taaacccatc aattttgtca ttatttttac tttttttgaa cgaaaataaa
      121 aaaaattaag ttttttcata tacttttatc gattcgatta atcgaggatg tctcggtgct
      181 ttccgtaccc tcctcccggt tattttaaag acggagctac aacatctgag gccttgatcg
      241 aatcgattaa gctccagaag gaaaatgata aggctaaggc caaggccgaa agaaaacgtg
      301 agaagaggga aaagaaggat aagaaaccga aagatcaaaa taaaagcaag gatgagaaga
      361 aggtgaagtc acaaaactac ccaaatgagc atccgcacga ttcacataag gtattgccga
      421 aagttgaagt cgatagcaaa aaatccgaac taaagaccga acttttggag aggagtgatg
      481 taacagaaga acatgggcaa cctcacaaac caagctactc atctgatagc agcacacaaa
      541 atagtaacaa aaggaaattt gatgatgcta gcttatctga ggttgccact gctcatggta
      601 aaccaattaa gattagactc ttgaagaagc aaaaagaatc agattcagtt aaagatacca
      661 atcgtccatc agtgacattt gcttgcaacg gtgttaatga aacatcggtt tcacacaata
      721 gaactggcgt ctccgtgaca tcgggccgag aaaacaatgc agtaaacatg ttggaaacaa
      781 aaaacattgg tttaaatgag catcaatttg gccaaaaaaa gtttgctaca tgttctgcaa
      841 gaccgagttt tcccttgacc aatcaaacac caaatggtca ctcaataaaa actaatgtac
      901 ctgctttgtc acaactaata cttgaaaggc cagttctggc tcaatgtcaa ctgagtaccg
      961 agatttcagg tccaaaaacg accgtgccgt caggtgctga aaaaaggtct atgagtgaag
     1021 tctcggtgcc tgttaaaaat ggtccctcga tatctgagaa gaaaacggac cggatccctc
     1081 aaaaagtggc tcccacacgg catgaaaaga agatgctgaa gaaacaatcc aagtatgaga
     1141 agctagtacg atgttgggtc cctccagttg ttgaagctca gctacctgtt gatgaagaag
     1201 tttggttatc aagaagggtg gagacgataa aatcttcgtc taggaatgat gctgagacgt
     1261 gtagggaatc ggcagcctcg ttgttatggc agccatttgc gcatttcttg gtggaagctg
     1321 atatgcatgc attgccttat acagttcctt tctgagttga ccacagacta caaatgtata
     1381 tactttttcg attttagtag tagatgaaaa gtgaaaaaag attagagaat tttgtaattt
     1441 gccgagaagg aatgtcccac ctcttctata gcagaaagta aaacctaatg tagtttgctt
     1501 gtatactttg ggataaaatg gttgaagttt attgcttcag ttttatcatt a
//
LOCUS       XM_071829520             762 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides expansin-A11-like
            (LOC139839459), transcript variant X1, mRNA.
ACCESSION   XM_071829520
VERSION     XM_071829520.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..762
                     /gene="LOC139839459"
                     /note="expansin-A11-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 98
                     Proteins"
                     /db_xref="GeneID:139839459"
     CDS             1..762
                     /gene="LOC139839459"
                     /codon_start=1
                     /product="expansin-A11-like isoform X1"
                     /protein_id="XP_071685621.1"
                     /db_xref="GeneID:139839459"
                     /translation="MTKSCIVLLSAICHLLVHAGAFTPSKWTRGHATFYGGSYASGTM
                     GGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYKIICDFKADPKWCRKGVSVTIT
                     ATNFCPPNYAQASNNGGWCNPPLQHFDMAQPAWEKIAIYAGGIVPVIFQRVPCKKHGG
                     VRFTINGRNYFELVLITNVGGAGAIKSVKIKGSKTGWLPMSRNWGSNWQSNSYLNGQS
                     LSFMVTTTDGVTKTFPGIVPANWGFGQTFSSRVQF"
     misc_feature    19..759
                     /gene="LOC139839459"
                     /note="expansin-A; Provisional; Region: PLN00193"
                     /db_xref="CDD:215097"
ORIGIN      
        1 atgaccaaaa gttgcattgt tttgctatct gctatatgcc atctacttgt tcatgctggg
       61 gcttttacac cttcaaaatg gactagaggt catgcaacat tttatggagg cagctatgct
      121 tcgggaacaa tggggggtgc ttgtgggtat ggtaacttgt actcaaccgg gtacggtaca
      181 agaactgctg cattaagtac tgctcttttc aacgatggtg cttcctgcgg ccagtgttac
      241 aagatcattt gtgatttcaa ggcggaccca aaatggtgca gaaaaggagt gtctgtaacc
      301 attaccgcta caaacttttg cccaccaaat tatgctcaag ctagtaataa tggaggctgg
      361 tgcaacccac cccttcagca tttcgatatg gctcaacctg cttgggagaa aatcgctatt
      421 tacgctggtg gaatcgtgcc cgttatcttc caaagggtac catgtaagaa acatggtgga
      481 gttagattca caattaacgg gcgcaattat tttgaacttg ttttgataac taatgttgga
      541 ggtgcagggg cgattaagtc ggtgaaaatc aaggggtcga aaacagggtg gctacccatg
      601 tcaaggaact ggggatctaa ctggcaatcg aattcgtatc tcaacggtca atctttgtcg
      661 tttatggtca caaccacaga tggtgtgacc aaaaccttcc cgggcattgt cccggcaaat
      721 tggggttttg gtcaaacgtt ctcaagccgt gtacaattct aa
//
LOCUS       XM_071829521             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides expansin-A11-like
            (LOC139839459), transcript variant X2, mRNA.
ACCESSION   XM_071829521
VERSION     XM_071829521.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139839459"
                     /note="expansin-A11-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 76
                     Proteins"
                     /db_xref="GeneID:139839459"
     CDS             1..720
                     /gene="LOC139839459"
                     /codon_start=1
                     /product="expansin-A11-like isoform X2"
                     /protein_id="XP_071685622.1"
                     /db_xref="GeneID:139839459"
                     /translation="MNLNPLKCSFAKWTRGHATFYGGSYASGTMGGACGYGNLYSTGY
                     GTRTAALSTALFNDGASCGQCYKIICDFKADPKWCRKGVSVTITATNFCPPNYAQASN
                     NGGWCNPPLQHFDMAQPAWEKIAIYAGGIVPVIFQRVPCKKHGGVRFTINGRNYFELV
                     LITNVGGAGAIKSVKIKGSKTGWLPMSRNWGSNWQSNSYLNGQSLSFMVTTTDGVTKT
                     FPGIVPANWGFGQTFSSRVQF"
     misc_feature    37..717
                     /gene="LOC139839459"
                     /note="expansin-A; Provisional; Region: PLN00193"
                     /db_xref="CDD:215097"
ORIGIN      
        1 atgaatctta acccgctcaa atgcagtttt gcaaaatgga ctagaggtca tgcaacattt
       61 tatggaggca gctatgcttc gggaacaatg gggggtgctt gtgggtatgg taacttgtac
      121 tcaaccgggt acggtacaag aactgctgca ttaagtactg ctcttttcaa cgatggtgct
      181 tcctgcggcc agtgttacaa gatcatttgt gatttcaagg cggacccaaa atggtgcaga
      241 aaaggagtgt ctgtaaccat taccgctaca aacttttgcc caccaaatta tgctcaagct
      301 agtaataatg gaggctggtg caacccaccc cttcagcatt tcgatatggc tcaacctgct
      361 tgggagaaaa tcgctattta cgctggtgga atcgtgcccg ttatcttcca aagggtacca
      421 tgtaagaaac atggtggagt tagattcaca attaacgggc gcaattattt tgaacttgtt
      481 ttgataacta atgttggagg tgcaggggcg attaagtcgg tgaaaatcaa ggggtcgaaa
      541 acagggtggc tacccatgtc aaggaactgg ggatctaact ggcaatcgaa ttcgtatctc
      601 aacggtcaat ctttgtcgtt tatggtcaca accacagatg gtgtgaccaa aaccttcccg
      661 ggcattgtcc cggcaaattg gggttttggt caaacgttct caagccgtgt acaattctaa
//
LOCUS       XM_071829522            1269 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839460), transcript variant X1, mRNA.
ACCESSION   XM_071829522
VERSION     XM_071829522.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1269
                     /gene="LOC139839460"
                     /note="uncharacterized LOC139839460; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839460"
     CDS             204..1073
                     /gene="LOC139839460"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685623.1"
                     /db_xref="GeneID:139839460"
                     /translation="MTPAAVQTPTSNYTAGQFGDTTYTKVFVGGLAWETQKDTMKTYF
                     EQFGEILEAVVITDKTTGRSKGYGFVTFREADAAMRACVDAAPVIDGRRANCNLASLG
                     VQRSKPSTPNKLGGGRSIRVIGGYGGGYHHHHQAVGAGGMGTTTAFPSATAFPHYAIH
                     QGIPFPTTNLYGYSPYSPDYTYPTSYYNVYGGTNGQYPYYGASGGGMVTAAGAATAFY
                     PYLSMAEGGHGSYATGQSYGVYPHHLYQYSALNSSGAYAQQYGTPISLAASPPALQPA
                     GVNVVLQSPTTHH"
     misc_feature    273..500
                     /gene="LOC139839460"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein RBM24, RBM38 and similar proteins;
                     Region: RRM_RBM24_RBM38_like; cd12384"
                     /db_xref="CDD:409818"
     polyA_site      1269
                     /gene="LOC139839460"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tccctccatt tctctcacaa atctctcatt tttcattcac aattttattt tattttatct
       61 tttttttttt cttcttcata atagtttgat agctggattt ctgttttatt ttccaattaa
      121 accctcataa caatccactt cttttgtaac aaacaaatca accaaccaat ttaataacac
      181 caccaaaaga tcaaacggaa aaaatgactc cggcggcggt gcagacacca accagtaact
      241 acacagccgg acagtttggt gatacaactt atacaaaagt ttttgttggt gggttggctt
      301 gggaaactca aaaagatacc atgaaaactt actttgaaca atttggtgag atcttggaag
      361 ctgttgttat cactgataaa actactggca gatctaaagg ctatggcttt gtgacattcc
      421 gggaagctga tgcggcgatg agagcatgtg ttgatgcagc tccggtgatt gatggccgga
      481 gggctaattg taatcttgca tctttaggtg ttcaaagatc taaaccttct acccctaaca
      541 aacttggtgg aggaaggagc attagggtta ttggtggtta tggaggagga tatcatcatc
      601 atcatcaagc tgttggtgca ggtggaatgg gaacaacaac agctttccct tctgctacag
      661 ccttccctca ttatgctatc caccaaggca tcccttttcc tactactaat ctttatggat
      721 actctccata ttctccggat tacacctatc caacgagtta ctataatgtg tatggaggaa
      781 caaacgggca gtatccatat tatggagcaa gtggtggtgg tatggtcaca gctgcgggtg
      841 cagccactgc cttttaccca tatctaagca tggccgaagg tggccatgga agttacgcta
      901 ctggtcagag ctatggtgtg tatccacacc atctctacca gtattcggct ctcaattctt
      961 caggagcata cgcacaacaa tatggtaccc cgatctccct tgcagcttct cccccagcat
     1021 tgcaacctgc aggcgtaaat gtggttctac aatctcccac tactcatcat taaaagattc
     1081 acgagttgca ttgatcgaac taaatatcca catgcatcag ccttgtcgat tctcagaatc
     1141 ttttcgattc ccaaaaaaaa aaaacctttg gcccaaccat ggttacatct ttttcattcc
     1201 ctctctctat ttcatgactt tgattaacat tgattcaagg catgaaaaaa aagcccccca
     1261 taggggtta
//
LOCUS       XM_071829523            1289 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839460), transcript variant X2, mRNA.
ACCESSION   XM_071829523
VERSION     XM_071829523.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1289
                     /gene="LOC139839460"
                     /note="uncharacterized LOC139839460; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839460"
     CDS             204..1058
                     /gene="LOC139839460"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685624.1"
                     /db_xref="GeneID:139839460"
                     /translation="MTPAAVQTPTSNYTAGQFGDTTYTKVFVGGLAWETQKDTMKTYF
                     EQFGEILEAVVITDKTTGRSKGYGFVTFREADAAMRACVDAAPVIDGRRANCNLASLG
                     VQRSKPSTPNKLGGGRSIRVIGGYGGGYHHHHQAVGAGGMGTTTAFPSATAFPHYAIH
                     QGIPFPTTNLYGYSPYSPDYTYPTSYYNVYGGTNGQYPYYGASGGGMVTAAGAATAFY
                     PYLSMAEGGHGSYATGQSYGVYPHHLYQYSALNSSGAYAQQYGTPISLAASPPALQPA
                     VCFAVPQA"
     misc_feature    273..500
                     /gene="LOC139839460"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein RBM24, RBM38 and similar proteins;
                     Region: RRM_RBM24_RBM38_like; cd12384"
                     /db_xref="CDD:409818"
     polyA_site      1289
                     /gene="LOC139839460"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tccctccatt tctctcacaa atctctcatt tttcattcac aattttattt tattttatct
       61 tttttttttt cttcttcata atagtttgat agctggattt ctgttttatt ttccaattaa
      121 accctcataa caatccactt cttttgtaac aaacaaatca accaaccaat ttaataacac
      181 caccaaaaga tcaaacggaa aaaatgactc cggcggcggt gcagacacca accagtaact
      241 acacagccgg acagtttggt gatacaactt atacaaaagt ttttgttggt gggttggctt
      301 gggaaactca aaaagatacc atgaaaactt actttgaaca atttggtgag atcttggaag
      361 ctgttgttat cactgataaa actactggca gatctaaagg ctatggcttt gtgacattcc
      421 gggaagctga tgcggcgatg agagcatgtg ttgatgcagc tccggtgatt gatggccgga
      481 gggctaattg taatcttgca tctttaggtg ttcaaagatc taaaccttct acccctaaca
      541 aacttggtgg aggaaggagc attagggtta ttggtggtta tggaggagga tatcatcatc
      601 atcatcaagc tgttggtgca ggtggaatgg gaacaacaac agctttccct tctgctacag
      661 ccttccctca ttatgctatc caccaaggca tcccttttcc tactactaat ctttatggat
      721 actctccata ttctccggat tacacctatc caacgagtta ctataatgtg tatggaggaa
      781 caaacgggca gtatccatat tatggagcaa gtggtggtgg tatggtcaca gctgcgggtg
      841 cagccactgc cttttaccca tatctaagca tggccgaagg tggccatgga agttacgcta
      901 ctggtcagag ctatggtgtg tatccacacc atctctacca gtattcggct ctcaattctt
      961 caggagcata cgcacaacaa tatggtaccc cgatctccct tgcagcttct cccccagcat
     1021 tgcaacctgc agtttgtttt gctgtgccgc aggcgtaaat gtggttctac aatctcccac
     1081 tactcatcat taaaagattc acgagttgca ttgatcgaac taaatatcca catgcatcag
     1141 ccttgtcgat tctcagaatc ttttcgattc ccaaaaaaaa aaaacctttg gcccaaccat
     1201 ggttacatct ttttcattcc ctctctctat ttcatgactt tgattaacat tgattcaagg
     1261 catgaaaaaa aagcccccca taggggtta
//
LOCUS       XM_071829524            1119 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At4g38870 (LOC139839461), mRNA.
ACCESSION   XM_071829524
VERSION     XM_071829524.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1119
                     /gene="LOC139839461"
                     /note="putative F-box protein At4g38870; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 Proteins"
                     /db_xref="GeneID:139839461"
     CDS             1..1119
                     /gene="LOC139839461"
                     /codon_start=1
                     /product="putative F-box protein At4g38870"
                     /protein_id="XP_071685625.1"
                     /db_xref="GeneID:139839461"
                     /translation="MGDIRRLSKKKNIMAGDQQLPVDIIYNILSRMPLKSLARFQCVS
                     KVWYKYINDPYLEIMHNKQRVIEDPRRRMLIMLELFPYPNIPIKYISENSIFKSELKE
                     ILLTQEEEEVDSRTPINAAAAAVMTAAYMKFWCIPGSCKYKLGDFVLGSCKGLLLYSP
                     QTYRHGKSLHVINPLKRECYKVPPIKIGTCRSIGLGFDDSTNTLKIVCVVIRHPKIDY
                     SRLNRFDNLIKEGLCCTMVHDVVLGGTDSWREIPLLVPPYDITLGGVFANGCLHWLGL
                     GYGPLIRKVVFFDMAKEEFGSIDAPPNTRSLMDHLVDLDGQVGLVCYDDNSRCIKVWR
                     LLKETTTTTTTTTKSCWVIHCCFDYFHDILIDDRLPFA"
     misc_feature    58..165
                     /gene="LOC139839461"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(58..63,67..75,82..87,94..96,127..135,139..141,
                     148..150)
                     /gene="LOC139839461"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(58..60,70..72,79..84,91..96,106..108,112..117,
                     127..135,139..141)
                     /gene="LOC139839461"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    445..>999
                     /gene="LOC139839461"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgggtgata ttcgtcgcct ttcaaaaaag aaaaacataa tggccggtga tcaacagttg
       61 cccgttgaca tcatatacaa catcttgtcc agaatgcctc taaaatcttt agctcgtttc
      121 cagtgtgtaa gcaaggtatg gtacaaatac attaacgatc cgtatcttga aatcatgcat
      181 aataaacaac gagtaatcga agatcccagg aggaggatgc tcatcatgtt ggaattattt
      241 ccatatccta acattccaat taagtatatt tcggagaata gtatttttaa atctgaactc
      301 aaagaaattt tgttaactca agaagaagaa gaagtcgatt cacgtacccc cattaatgct
      361 gctgctgctg ctgtgatgac agcagcgtat atgaagtttt ggtgtatacc cggtagttgt
      421 aaatataagc taggggactt tgttttaggt tcctgcaagg gtctactatt atattcacca
      481 caaacctacc gccatggcaa atctttacat gtgatcaatc ctttaaagag agaatgttat
      541 aaggtaccac ctatcaaaat tggaacatgt agatcaatcg gccttggttt tgatgattcc
      601 accaatactt tgaaaattgt gtgtgttgtg attcgacatc caaagattga ttattcaagg
      661 ttaaatcggt ttgataattt gatcaaggag ggattatgct gcaccatggt acatgatgtt
      721 gtattggggg ggacagattc atggcgtgaa atacccctgc ttgttccacc gtatgacatt
      781 acacttggtg gtgtatttgc taatggatgt ttgcactggt tagggttagg gtacggtcct
      841 ctaataagga aagtagtatt ttttgacatg gcgaaagagg aattcgggtc gatagatgct
      901 cctccaaata caagaagtct gatggatcat ttggttgatc tagatggtca ggttggactt
      961 gtctgttatg atgataatag tcgttgcata aaggtgtggc ggttactcaa ggaaacaaca
     1021 acaacaacaa caacaacaac aaaatcatgt tgggtcatcc attgttgctt tgattacttt
     1081 cacgatatac ttattgatga cagactgcct tttgcataa
//
LOCUS       XM_071829525             511 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839462), mRNA.
ACCESSION   XM_071829525
VERSION     XM_071829525.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..511
                     /gene="LOC139839462"
                     /note="uncharacterized LOC139839462; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839462"
     CDS             57..383
                     /gene="LOC139839462"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685626.1"
                     /db_xref="GeneID:139839462"
                     /translation="MSVSRNLMMWMMMWIMVWIEAMNILVGGVPEGNPLQLKEVITSC
                     FCVCGKINTLILTMLTGTQSEAAAYEFTMVLKFSCLIFLESLKELQRQVIAVSKSSDI
                     VCVDGS"
     misc_feature    219..>368
                     /gene="LOC139839462"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 tgtttattgt cgacgacggt ggcgattcca ttgtagctgt atttcttctg ccttccatga
       61 gcgtttccag gaatctgatg atgtggatga tgatgtggat aatggtgtgg atagaagcga
      121 tgaatatttt agttggtggc gttcccgaag gcaatcctct tcaacttaaa gaagtcataa
      181 ccagttgctt ctgtgtgtgt gggaaaatca acactttaat tttgaccatg ctgactggca
      241 cccaatctga ggctgcagcc tatgagttta caatggtact aaaattcagt tgcttgatct
      301 tcttggaatc attgaaggag cttcagaggc aagtgattgc agtttcaaag tcatcagata
      361 ttgtgtgtgt tgatggttct tgatgcttca taagtaagtc ctctttgtga cttgaaagtt
      421 gaaaccatgt ttagcatatg ctatcggtgg tactgtgatt tggttttgtt aatttatttg
      481 atatctagct agtaagagga tacgtgctac g
//
LOCUS       XR_011756950            5237 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X1, ncRNA.
ACCESSION   XR_011756950
VERSION     XR_011756950.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5237
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5237
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..5237
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccaggt cgaatcattc tttccaatat gaattatgta gtttgtgttt cattatttgt
     2461 tttaccgttg ctccgatgtt ggtaaatttt gatagtttgt aaaaatctgg gtgaaaaaga
     2521 ttatccgggc gagggggtta aatgaacagc tggttgagga agcaaatgcc aaattttcac
     2581 ttttgggtcc taccgtcttg gagtatgagg atttatctca atatattttt ataaagataa
     2641 tagtgattga gtgatattga tgtacattgt ttacgttttc ttatgtttct ttatcacttc
     2701 accgtagttg acatttgttc aataggctta tgtaataccc ttaattgcta attatgaatt
     2761 atagtttctg tagttgtcat attgcaaatt gtgtaatatc tttggtgcat ttgactttct
     2821 aacagattta gacatttgtt tataccaaat ttttcttaga agagagaatg ataaattgtt
     2881 attgtattag gttcctctaa agttgttcct acatagacat cagttatata aattatatat
     2941 ggtcatacaa gcttattgtt ctatgtacag aagcaattag tcagatgctg cttataatgt
     3001 aatatgatac tccgtaattt gtttctatac ttgctttgca ggactgcttt caatggcaaa
     3061 tgctggaaag aacgccaacg ggttacaatt cttcatcaca actgtcccaa ccagctggta
     3121 atttgcttac tgtcacttag gatcaaatga aatattaatg aatctacatg ctttgactta
     3181 catcttcttt aatgaatcta catgcacggt tgaatatatt tcttggttca tgagggcaaa
     3241 gctttctata atattctttt cccatcttct actcacctgc cctaggtatt acaatattaa
     3301 actgctgttg ggttgccatc ttaaccaata ctgataatat tttttatgag ttcattaaac
     3361 taataatatg atttctaaga tttatcaatg caagtgaagg ccgaatttct gttgttgttg
     3421 cgcgttctaa gattcacgga ttgtaagttc agcatttcgt taagctaaat ttcaagtttc
     3481 ttgcacagat tatataaatt taagctaaat tttaataatt gcgtacgggc tttactgatc
     3541 aaaatgcata gacttttaga catgtcaata tgtgttcaag ttgccatact tttttcatgt
     3601 tcagcctttg taaactaagt tgatttttta cccacctaac tctaccaaag taaaacatat
     3661 cgtaagtcga atagtccatc tttaagtggg tcgaatatcc atctcttcat ttttttactt
     3721 cattataaag taatcaggcc aattttttcc ctttttttct ttttgttttt ttgaccggca
     3781 aagtgtataa actttgttga aaatatataa actattttgc tgctttgatt aaaaatatta
     3841 tctatttaca tggtctcctt attttgtatt atttcagtta tatttattta catcaattgg
     3901 atgggaagat ggaatctcag tgaagggcct gcttacacat agagccgatc tccaacaaca
     3961 atatctcatg aattactgct ggaaagaatg tgaaagttta agagaaaaca tggagaaaag
     4021 aatagccaat acgtggcgat ccacacaggt aaaccatctt catttacctg tgttaatttt
     4081 gatccgctaa tggttaaatg ggtcattgga ctattctttg gttccaccag gtcatatttg
     4141 gattactgat aaaaaaggaa ctacttatgg gttgagtagg tctaactggt caaaagtcac
     4201 ccaaaatttt ataaaattct tttaatcttt ttattacaaa aaaaaaattg ttattagtat
     4261 aatgatacag gttacttatt tttaaaatat tggttaaatt gtaaaagtta gcaaagaata
     4321 gtccaagaca acctcttaac acaattcttc tcatcctttg ttcgtaaggt gagtaacgga
     4381 tccaatgtta tgttttggtt accaaatgtg caatctaata tggataatct tttttctaga
     4441 ctttttgcgc tcgaaaaaaa aaatcaaaaa gtcactgttg ctgaaagaac ttgctggatt
     4501 gaatagattc taattgaaaa ttgggattgg aacaatgtaa ttcggggtcg tgctgatgga
     4561 gatcttggcc atttaactga tcatctcgct tcaactccca atctcaatga atctaaagat
     4621 ggatgggcct ggatattaca ttcaaaaggg agattttaga ctaaattttt atcttcttta
     4681 atagataaat atatatttta gatgtcggtg ctaacaattt ggtgactatg aaatggctac
     4741 attgtattcc aataaaagtt aacatctccg gttggcattt attaaaggat aggtcggcta
     4801 cctgaacgaa tttggagaaa agaggatttc cacttgtgtc aaacctatgc ccattatgtg
     4861 aagccgaacc agaatattcg aatcatattt tcatgaaatg caggtttgta gctcctctat
     4921 ggcgtaacta tttatcgtgg tggaatattt cgggctcaac tcccaatggt gttgccaatg
     4981 ctgtgaaacc cagctgattg ctgcggtttt tgacataaaa aaacggaatt aagaaaaaca
     5041 accaccatga aaaagcgcct aaagaagtct tgtgcaaatt gcaaacactc acatgagata
     5101 gtcaaagttt agaaactaag tgatatgact caagacaata tttcgtgagc attaagtgga
     5161 ttattgaagt taatgatgaa gttaataatg aaatatatat tttttttttt gaaaagcaat
     5221 gaaatatatt ttgtaga
//
LOCUS       XR_011756951            4543 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X2, ncRNA.
ACCESSION   XR_011756951
VERSION     XR_011756951.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4543
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4543
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4543
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacaggac tgctttcaat ggcaaatgct ggaaagaacg ccaacgggtt acaattcttc
     2401 atcacaactg tcccaaccag ctggtaattt gcttactgtc acttaggatc aaatgaaata
     2461 ttaatgaatc tacatgcttt gacttacatc ttctttaatg aatctacatg cacggttgaa
     2521 tatatttctt ggttcatgag ggcaaagctt tctataatat tcttttccca tcttctactc
     2581 acctgcccta ggtattacaa tattaaactg ctgttgggtt gccatcttaa ccaatactga
     2641 taatattttt tatgagttca ttaaactaat aatatgattt ctaagattta tcaatgcaag
     2701 tgaaggccga atttctgttg ttgttgcgcg ttctaagatt cacggattgt aagttcagca
     2761 tttcgttaag ctaaatttca agtttcttgc acagattata taaatttaag ctaaatttta
     2821 ataattgcgt acgggcttta ctgatcaaaa tgcatagact tttagacatg tcaatatgtg
     2881 ttcaagttgc catacttttt tcatgttcag cctttgtaaa ctaagttgat tttttaccca
     2941 cctaactcta ccaaagtaaa acatatcgta agtcgaatag tccatcttta agtgggtcga
     3001 atatccatct cttcattttt ttacttcatt ataaagtaat caggccaatt ttttcccttt
     3061 ttttcttttt gtttttttga ccggcaaagt gtataaactt tgttgaaaat atataaacta
     3121 ttttgctgct ttgattaaaa atattatcta tttacatggt ctccttattt tgtattattt
     3181 cagttatatt tatttacatc aattggatgg gaagatggaa tctcagtgaa gggcctgctt
     3241 acacatagag ccgatctcca acaacaatat ctcatgaatt actgctggaa agaatgtgaa
     3301 agtttaagag aaaacatgga gaaaagaata gccaatacgt ggcgatccac acaggtaaac
     3361 catcttcatt tacctgtgtt aattttgatc cgctaatggt taaatgggtc attggactat
     3421 tctttggttc caccaggtca tatttggatt actgataaaa aaggaactac ttatgggttg
     3481 agtaggtcta actggtcaaa agtcacccaa aattttataa aattctttta atctttttat
     3541 tacaaaaaaa aaattgttat tagtataatg atacaggtta cttattttta aaatattggt
     3601 taaattgtaa aagttagcaa agaatagtcc aagacaacct cttaacacaa ttcttctcat
     3661 cctttgttcg taaggtgagt aacggatcca atgttatgtt ttggttacca aatgtgcaat
     3721 ctaatatgga taatcttttt tctagacttt ttgcgctcga aaaaaaaaat caaaaagtca
     3781 ctgttgctga aagaacttgc tggattgaat agattctaat tgaaaattgg gattggaaca
     3841 atgtaattcg gggtcgtgct gatggagatc ttggccattt aactgatcat ctcgcttcaa
     3901 ctcccaatct caatgaatct aaagatggat gggcctggat attacattca aaagggagat
     3961 tttagactaa atttttatct tctttaatag ataaatatat attttagatg tcggtgctaa
     4021 caatttggtg actatgaaat ggctacattg tattccaata aaagttaaca tctccggttg
     4081 gcatttatta aaggataggt cggctacctg aacgaatttg gagaaaagag gatttccact
     4141 tgtgtcaaac ctatgcccat tatgtgaagc cgaaccagaa tattcgaatc atattttcat
     4201 gaaatgcagg tttgtagctc ctctatggcg taactattta tcgtggtgga atatttcggg
     4261 ctcaactccc aatggtgttg ccaatgctgt gaaacccagc tgattgctgc ggtttttgac
     4321 ataaaaaaac ggaattaaga aaaacaacca ccatgaaaaa gcgcctaaag aagtcttgtg
     4381 caaattgcaa acactcacat gagatagtca aagtttagaa actaagtgat atgactcaag
     4441 acaatatttc gtgagcatta agtggattat tgaagttaat gatgaagtta ataatgaaat
     4501 atatattttt ttttttgaaa agcaatgaaa tatattttgt aga
//
LOCUS       XR_011756952            4814 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X3, ncRNA.
ACCESSION   XR_011756952
VERSION     XR_011756952.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4814
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4814
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4814
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccaggt cgaatcattc tttccaatat gaattatgta gtttgtgttt cattatttgt
     2461 tttaccgttg ctccgatgtt ggtaaatttt gatagtttgt aaaaatctgg gtgaaaaaga
     2521 ttatccgggc gagggggtta aatgaacagc tggttgagga agcaaatgcc aaattttcac
     2581 ttttgggtcc taccgtcttg gagtatgagg atttatctca atatattttt ataaagataa
     2641 tagtgattga gtgatattga tgtacattgt ttacgttttc ttatgtttct ttatcacttc
     2701 accgtagttg acatttgttc aataggctta tgtaataccc ttaattgcta attatgaatt
     2761 atagtttctg tagttgtcat attgcaaatt gtgtaatatc tttggtgcat ttgactttct
     2821 aacagattta gacatttgtt tataccaaat ttttcttaga agagagaatg ataaattgtt
     2881 attgtattag gttcctctaa agttgttcct acatagacat cagttatata aattatatat
     2941 ggtcatacaa gcttattgtt ctatgtacag aagcaattag tcagatgctg cttataatgt
     3001 aatatgatac tccgtaattt gtttctatac ttgctttgca ggactgcttt caatggcaaa
     3061 tgctggaaag aacgccaacg ggttacaatt cttcatcaca actgtcccaa ccagctggta
     3121 atttgcttac tgtcacttag gatcaaatga aatattaatg aatctacatg ctttgactta
     3181 catcttcttt aatgaatcta catgcacggt tgaatatatt tcttggttca tgagggcaaa
     3241 gctttctata atattctttt cccatcttct actcacctgc cctaggtatt acaatattaa
     3301 actgctgttg ggttgccatc ttaaccaata ctgataatat tttttatgag ttcattaaac
     3361 taataatatg atttctaaga tttatcaatg caagtgaagg ccgaatttct gttgttgttg
     3421 cgcgttctaa gattcacgga ttgtaagttc agcatttcgt taagctaaat ttcaagtttc
     3481 ttgcacagat tatataaatt taagctaaat tttaataatt gcgtacgggc tttactgatc
     3541 aaaatgcata gacttttaga catgtcaata tgtgttcaag ttgccatact tttttcatgt
     3601 tcagcctttg taaactaagt tgatttttta cccacctaac tctaccaaag taaaacatat
     3661 cgtaagtcga atagtccatc tttaagtggg tcgaatatcc atctcttcat ttttttactt
     3721 cattataaag taatcaggcc aattttttcc ctttttttct ttttgttttt ttgaccggca
     3781 aagtgtataa actttgttga aaatatataa actattttgc tgctttgatt aaaaatatta
     3841 tctatttaca tggtctcctt attttgtatt atttcagtta tatttattta catcaattgg
     3901 atgggaagat ggaatctcag tgaagggcct gcttacacat agagccgatc tccaacaaca
     3961 atatctcatg aattactgct ggaaagaatg tgaaagttta agagaaaaca tggagaaaag
     4021 aatagccaat acgtggcgat ccacacagtc actgttgctg aaagaacttg ctggattgaa
     4081 tagattctaa ttgaaaattg ggattggaac aatgtaattc ggggtcgtgc tgatggagat
     4141 cttggccatt taactgatca tctcgcttca actcccaatc tcaatgaatc taaagatgga
     4201 tgggcctgga tattacattc aaaagggaga ttttagacta aatttttatc ttctttaata
     4261 gataaatata tattttagat gtcggtgcta acaatttggt gactatgaaa tggctacatt
     4321 gtattccaat aaaagttaac atctccggtt ggcatttatt aaaggatagg tcggctacct
     4381 gaacgaattt ggagaaaaga ggatttccac ttgtgtcaaa cctatgccca ttatgtgaag
     4441 ccgaaccaga atattcgaat catattttca tgaaatgcag gtttgtagct cctctatggc
     4501 gtaactattt atcgtggtgg aatatttcgg gctcaactcc caatggtgtt gccaatgctg
     4561 tgaaacccag ctgattgctg cggtttttga cataaaaaaa cggaattaag aaaaacaacc
     4621 accatgaaaa agcgcctaaa gaagtcttgt gcaaattgca aacactcaca tgagatagtc
     4681 aaagtttaga aactaagtga tatgactcaa gacaatattt cgtgagcatt aagtggatta
     4741 ttgaagttaa tgatgaagtt aataatgaaa tatatatttt tttttttgaa aagcaatgaa
     4801 atatattttg taga
//
LOCUS       XR_011756953            4806 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X4, ncRNA.
ACCESSION   XR_011756953
VERSION     XR_011756953.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4806
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4806
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4806
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtatatgg gtagccaagg ctttaaggct ctgaataatg ggcaaagatt gggcatcacg
     1861 tagcctatat ctttgggtgg tccaagtgaa gtatcaagac aaacgagctt gaacagacta
     1921 tttgagattc ataaagaggc cataagttgg gaagaagttt taggacggtt cgaccaggtc
     1981 gaatcattct ttccaatatg aattatgtag tttgtgtttc attatttgtt ttaccgttgc
     2041 tccgatgttg gtaaattttg atagtttgta aaaatctggg tgaaaaagat tatccgggcg
     2101 agggggttaa atgaacagct ggttgaggaa gcaaatgcca aattttcact tttgggtcct
     2161 accgtcttgg agtatgagga tttatctcaa tatattttta taaagataat agtgattgag
     2221 tgatattgat gtacattgtt tacgttttct tatgtttctt tatcacttca ccgtagttga
     2281 catttgttca ataggcttat gtaataccct taattgctaa ttatgaatta tagtttctgt
     2341 agttgtcata ttgcaaattg tgtaatatct ttggtgcatt tgactttcta acagatttag
     2401 acatttgttt ataccaaatt tttcttagaa gagagaatga taaattgtta ttgtattagg
     2461 ttcctctaaa gttgttccta catagacatc agttatataa attatatatg gtcatacaag
     2521 cttattgttc tatgtacaga agcaattagt cagatgctgc ttataatgta atatgatact
     2581 ccgtaatttg tttctatact tgctttgcag gactgctttc aatggcaaat gctggaaaga
     2641 acgccaacgg gttacaattc ttcatcacaa ctgtcccaac cagctggtaa tttgcttact
     2701 gtcacttagg atcaaatgaa atattaatga atctacatgc tttgacttac atcttcttta
     2761 atgaatctac atgcacggtt gaatatattt cttggttcat gagggcaaag ctttctataa
     2821 tattcttttc ccatcttcta ctcacctgcc ctaggtatta caatattaaa ctgctgttgg
     2881 gttgccatct taaccaatac tgataatatt ttttatgagt tcattaaact aataatatga
     2941 tttctaagat ttatcaatgc aagtgaaggc cgaatttctg ttgttgttgc gcgttctaag
     3001 attcacggat tgtaagttca gcatttcgtt aagctaaatt tcaagtttct tgcacagatt
     3061 atataaattt aagctaaatt ttaataattg cgtacgggct ttactgatca aaatgcatag
     3121 acttttagac atgtcaatat gtgttcaagt tgccatactt ttttcatgtt cagcctttgt
     3181 aaactaagtt gattttttac ccacctaact ctaccaaagt aaaacatatc gtaagtcgaa
     3241 tagtccatct ttaagtgggt cgaatatcca tctcttcatt tttttacttc attataaagt
     3301 aatcaggcca attttttccc tttttttctt tttgtttttt tgaccggcaa agtgtataaa
     3361 ctttgttgaa aatatataaa ctattttgct gctttgatta aaaatattat ctatttacat
     3421 ggtctcctta ttttgtatta tttcagttat atttatttac atcaattgga tgggaagatg
     3481 gaatctcagt gaagggcctg cttacacata gagccgatct ccaacaacaa tatctcatga
     3541 attactgctg gaaagaatgt gaaagtttaa gagaaaacat ggagaaaaga atagccaata
     3601 cgtggcgatc cacacaggta aaccatcttc atttacctgt gttaattttg atccgctaat
     3661 ggttaaatgg gtcattggac tattctttgg ttccaccagg tcatatttgg attactgata
     3721 aaaaaggaac tacttatggg ttgagtaggt ctaactggtc aaaagtcacc caaaatttta
     3781 taaaattctt ttaatctttt tattacaaaa aaaaaattgt tattagtata atgatacagg
     3841 ttacttattt ttaaaatatt ggttaaattg taaaagttag caaagaatag tccaagacaa
     3901 cctcttaaca caattcttct catcctttgt tcgtaaggtg agtaacggat ccaatgttat
     3961 gttttggtta ccaaatgtgc aatctaatat ggataatctt ttttctagac tttttgcgct
     4021 cgaaaaaaaa aatcaaaaag tcactgttgc tgaaagaact tgctggattg aatagattct
     4081 aattgaaaat tgggattgga acaatgtaat tcggggtcgt gctgatggag atcttggcca
     4141 tttaactgat catctcgctt caactcccaa tctcaatgaa tctaaagatg gatgggcctg
     4201 gatattacat tcaaaaggga gattttagac taaattttta tcttctttaa tagataaata
     4261 tatattttag atgtcggtgc taacaatttg gtgactatga aatggctaca ttgtattcca
     4321 ataaaagtta acatctccgg ttggcattta ttaaaggata ggtcggctac ctgaacgaat
     4381 ttggagaaaa gaggatttcc acttgtgtca aacctatgcc cattatgtga agccgaacca
     4441 gaatattcga atcatatttt catgaaatgc aggtttgtag ctcctctatg gcgtaactat
     4501 ttatcgtggt ggaatatttc gggctcaact cccaatggtg ttgccaatgc tgtgaaaccc
     4561 agctgattgc tgcggttttt gacataaaaa aacggaatta agaaaaacaa ccaccatgaa
     4621 aaagcgccta aagaagtctt gtgcaaattg caaacactca catgagatag tcaaagttta
     4681 gaaactaagt gatatgactc aagacaatat ttcgtgagca ttaagtggat tattgaagtt
     4741 aatgatgaag ttaataatga aatatatatt tttttttttg aaaagcaatg aaatatattt
     4801 tgtaga
//
LOCUS       XR_011756954            4846 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X5, ncRNA.
ACCESSION   XR_011756954
VERSION     XR_011756954.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4846
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4846
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccaggt cgaatcattc tttccaatat gaattatgta gtttgtgttt cattatttgt
     2461 tttaccgttg ctccgatgtt ggtaaatttt gatagtttgt aaaaatctgg gtgaaaaaga
     2521 ttatccgggc gagggggtta aatgaacagc tggttgagga agcaaatgcc aaattttcac
     2581 ttttgggtcc taccgtcttg gagtatgagg atttatctca atatattttt ataaagataa
     2641 tagtgattga gtgatattga tgtacattgt ttacgttttc ttatgtttct ttatcacttc
     2701 accgtagttg acatttgttc aataggctta tgtaataccc ttaattgcta attatgaatt
     2761 atagtttctg tagttgtcat attgcaaatt gtgtaatatc tttggtgcat ttgactttct
     2821 aacagattta gacatttgtt tataccaaat ttttcttaga agagagaatg ataaattgtt
     2881 attgtattag gttcctctaa agttgttcct acatagacat cagttatata aattatatat
     2941 ggtcatacaa gcttattgtt ctatgtacag aagcaattag tcagatgctg cttataatgt
     3001 aatatgatac tccgtaattt gtttctatac ttgctttgca ggactgcttt caatggcaaa
     3061 tgctggaaag aacgccaacg ggttacaatt cttcatcaca actgtcccaa ccagctggta
     3121 atttgcttac tgtcacttag gatcaaatga aatattaatg aatctacatg ctttgactta
     3181 catcttcttt aatgaatcta catgcacggt tgaatatatt tcttggttca tgagggcaaa
     3241 gctttctata atattctttt cccatcttct actcacctgc cctaggtatt acaatattaa
     3301 actgctgttg ggttgccatc ttaaccaata ctgataatat tttttatgag ttcattaaac
     3361 taataatatg atttctaaga tttatcaatg caagtgaagg ccgaatttct gttgttgttg
     3421 cgcgttctaa gattcacgga ttgtaagttc agcatttcgt taagctaaat ttcaagtttc
     3481 ttgcacagat tatataaatt taagctaaat tttaataatt gcgtacgggc tttactgatc
     3541 aaaatgcata gacttttaga catgtcaata tgtgttcaag ttgccatact tttttcatgt
     3601 tcagcctttg taaactaagt tgatttttta cccacctaac tctaccaaag taaaacatat
     3661 cgtaagtcga atagtccatc tttaagtggg tcgaatatcc atctcttcat ttttttactt
     3721 cattataaag taatcaggcc aattttttcc ctttttttct ttttgttttt ttgaccggca
     3781 aagtgtataa actttgttga aaatatataa actattttgc tgctttgatt aaaaatatta
     3841 tctatttaca tggtctcctt attttgtatt atttcagtta tatttattta catcaattgg
     3901 atgggaagat ggaatctcag tgaagggcct gcttacacat agagccgatc tccaacaaca
     3961 atatctcatg aattactgct ggaaagaatg tgaaagttta agagaaaaca tggagaaaag
     4021 aatagccaat acgtggcgat ccacacagac tttttgcgct cgaaaaaaaa aatcaaaaag
     4081 tcactgttgc tgaaagaact tgctggattg aatagattct aattgaaaat tgggattgga
     4141 acaatgtaat tcggggtcgt gctgatggag atcttggcca tttaactgat catctcgctt
     4201 caactcccaa tctcaatgaa tctaaagatg gatgggcctg gatattacat tcaaaaggga
     4261 gattttagac taaattttta tcttctttaa tagataaata tatattttag atgtcggtgc
     4321 taacaatttg gtgactatga aatggctaca ttgtattcca ataaaagtta acatctccgg
     4381 ttggcattta ttaaaggata ggtcggctac ctgaacgaat ttggagaaaa gaggatttcc
     4441 acttgtgtca aacctatgcc cattatgtga agccgaacca gaatattcga atcatatttt
     4501 catgaaatgc aggtttgtag ctcctctatg gcgtaactat ttatcgtggt ggaatatttc
     4561 gggctcaact cccaatggtg ttgccaatgc tgtgaaaccc agctgattgc tgcggttttt
     4621 gacataaaaa aacggaatta agaaaaacaa ccaccatgaa aaagcgccta aagaagtctt
     4681 gtgcaaattg caaacactca catgagatag tcaaagttta gaaactaagt gatatgactc
     4741 aagacaatat ttcgtgagca ttaagtggat tattgaagtt aatgatgaag ttaataatga
     4801 aatatatatt tttttttttg aaaagcaatg aaatatattt tgtaga
//
LOCUS       XR_011756955            4112 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X6, ncRNA.
ACCESSION   XR_011756955
VERSION     XR_011756955.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4112
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4112
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4112
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtatatgg gtagccaagg ctttaaggct ctgaataatg ggcaaagatt gggcatcacg
     1861 tagcctatat ctttgggtgg tccaagtgaa gtatcaagac aaacgagctt gaacaggact
     1921 gctttcaatg gcaaatgctg gaaagaacgc caacgggtta caattcttca tcacaactgt
     1981 cccaaccagc tggtaatttg cttactgtca cttaggatca aatgaaatat taatgaatct
     2041 acatgctttg acttacatct tctttaatga atctacatgc acggttgaat atatttcttg
     2101 gttcatgagg gcaaagcttt ctataatatt cttttcccat cttctactca cctgccctag
     2161 gtattacaat attaaactgc tgttgggttg ccatcttaac caatactgat aatatttttt
     2221 atgagttcat taaactaata atatgatttc taagatttat caatgcaagt gaaggccgaa
     2281 tttctgttgt tgttgcgcgt tctaagattc acggattgta agttcagcat ttcgttaagc
     2341 taaatttcaa gtttcttgca cagattatat aaatttaagc taaattttaa taattgcgta
     2401 cgggctttac tgatcaaaat gcatagactt ttagacatgt caatatgtgt tcaagttgcc
     2461 atactttttt catgttcagc ctttgtaaac taagttgatt ttttacccac ctaactctac
     2521 caaagtaaaa catatcgtaa gtcgaatagt ccatctttaa gtgggtcgaa tatccatctc
     2581 ttcatttttt tacttcatta taaagtaatc aggccaattt tttccctttt tttctttttg
     2641 tttttttgac cggcaaagtg tataaacttt gttgaaaata tataaactat tttgctgctt
     2701 tgattaaaaa tattatctat ttacatggtc tccttatttt gtattatttc agttatattt
     2761 atttacatca attggatggg aagatggaat ctcagtgaag ggcctgctta cacatagagc
     2821 cgatctccaa caacaatatc tcatgaatta ctgctggaaa gaatgtgaaa gtttaagaga
     2881 aaacatggag aaaagaatag ccaatacgtg gcgatccaca caggtaaacc atcttcattt
     2941 acctgtgtta attttgatcc gctaatggtt aaatgggtca ttggactatt ctttggttcc
     3001 accaggtcat atttggatta ctgataaaaa aggaactact tatgggttga gtaggtctaa
     3061 ctggtcaaaa gtcacccaaa attttataaa attcttttaa tctttttatt acaaaaaaaa
     3121 aattgttatt agtataatga tacaggttac ttatttttaa aatattggtt aaattgtaaa
     3181 agttagcaaa gaatagtcca agacaacctc ttaacacaat tcttctcatc ctttgttcgt
     3241 aaggtgagta acggatccaa tgttatgttt tggttaccaa atgtgcaatc taatatggat
     3301 aatctttttt ctagactttt tgcgctcgaa aaaaaaaatc aaaaagtcac tgttgctgaa
     3361 agaacttgct ggattgaata gattctaatt gaaaattggg attggaacaa tgtaattcgg
     3421 ggtcgtgctg atggagatct tggccattta actgatcatc tcgcttcaac tcccaatctc
     3481 aatgaatcta aagatggatg ggcctggata ttacattcaa aagggagatt ttagactaaa
     3541 tttttatctt ctttaataga taaatatata ttttagatgt cggtgctaac aatttggtga
     3601 ctatgaaatg gctacattgt attccaataa aagttaacat ctccggttgg catttattaa
     3661 aggataggtc ggctacctga acgaatttgg agaaaagagg atttccactt gtgtcaaacc
     3721 tatgcccatt atgtgaagcc gaaccagaat attcgaatca tattttcatg aaatgcaggt
     3781 ttgtagctcc tctatggcgt aactatttat cgtggtggaa tatttcgggc tcaactccca
     3841 atggtgttgc caatgctgtg aaacccagct gattgctgcg gtttttgaca taaaaaaacg
     3901 gaattaagaa aaacaaccac catgaaaaag cgcctaaaga agtcttgtgc aaattgcaaa
     3961 cactcacatg agatagtcaa agtttagaaa ctaagtgata tgactcaaga caatatttcg
     4021 tgagcattaa gtggattatt gaagttaatg atgaagttaa taatgaaata tatatttttt
     4081 tttttgaaaa gcaatgaaat atattttgta ga
//
LOCUS       XR_011756956            3783 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X7, ncRNA.
ACCESSION   XR_011756956
VERSION     XR_011756956.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3783
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..3783
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacaggac tgctttcaat ggcaaatgct ggaaagaacg ccaacgggtt acaattcttc
     2401 atcacaactg tcccaaccag ctgttatatt tatttacatc aattggatgg gaagatggaa
     2461 tctcagtgaa gggcctgctt acacatagag ccgatctcca acaacaatat ctcatgaatt
     2521 actgctggaa agaatgtgaa agtttaagag aaaacatgga gaaaagaata gccaatacgt
     2581 ggcgatccac acaggtaaac catcttcatt tacctgtgtt aattttgatc cgctaatggt
     2641 taaatgggtc attggactat tctttggttc caccaggtca tatttggatt actgataaaa
     2701 aaggaactac ttatgggttg agtaggtcta actggtcaaa agtcacccaa aattttataa
     2761 aattctttta atctttttat tacaaaaaaa aaattgttat tagtataatg atacaggtta
     2821 cttattttta aaatattggt taaattgtaa aagttagcaa agaatagtcc aagacaacct
     2881 cttaacacaa ttcttctcat cctttgttcg taaggtgagt aacggatcca atgttatgtt
     2941 ttggttacca aatgtgcaat ctaatatgga taatcttttt tctagacttt ttgcgctcga
     3001 aaaaaaaaat caaaaagtca ctgttgctga aagaacttgc tggattgaat agattctaat
     3061 tgaaaattgg gattggaaca atgtaattcg gggtcgtgct gatggagatc ttggccattt
     3121 aactgatcat ctcgcttcaa ctcccaatct caatgaatct aaagatggat gggcctggat
     3181 attacattca aaagggagat tttagactaa atttttatct tctttaatag ataaatatat
     3241 attttagatg tcggtgctaa caatttggtg actatgaaat ggctacattg tattccaata
     3301 aaagttaaca tctccggttg gcatttatta aaggataggt cggctacctg aacgaatttg
     3361 gagaaaagag gatttccact tgtgtcaaac ctatgcccat tatgtgaagc cgaaccagaa
     3421 tattcgaatc atattttcat gaaatgcagg tttgtagctc ctctatggcg taactattta
     3481 tcgtggtgga atatttcggg ctcaactccc aatggtgttg ccaatgctgt gaaacccagc
     3541 tgattgctgc ggtttttgac ataaaaaaac ggaattaaga aaaacaacca ccatgaaaaa
     3601 gcgcctaaag aagtcttgtg caaattgcaa acactcacat gagatagtca aagtttagaa
     3661 actaagtgat atgactcaag acaatatttc gtgagcatta agtggattat tgaagttaat
     3721 gatgaagtta ataatgaaat atatattttt ttttttgaaa agcaatgaaa tatattttgt
     3781 aga
//
LOCUS       XR_011756957            3800 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X8, ncRNA.
ACCESSION   XR_011756957
VERSION     XR_011756957.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3800
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3800
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..3800
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaagat atgggtagcc aaggctttaa ggctctgaat aatgggcaaa
      841 gattgggcat cacgtagcct atatctttgg gtggtccaag tgaagtatca agacaaacga
      901 gcttgaacag actatttgag attcataaag aggccataag ttgggaagaa gttttaggac
      961 ggttcgacca ggtcgaatca ttctttccaa tatgaattat gtagtttgtg tttcattatt
     1021 tgttttaccg ttgctccgat gttggtaaat tttgatagtt tgtaaaaatc tgggtgaaaa
     1081 agattatccg ggcgaggggg ttaaatgaac agctggttga ggaagcaaat gccaaatttt
     1141 cacttttggg tcctaccgtc ttggagtatg aggatttatc tcaatatatt tttataaaga
     1201 taatagtgat tgagtgatat tgatgtacat tgtttacgtt ttcttatgtt tctttatcac
     1261 ttcaccgtag ttgacatttg ttcaataggc ttatgtaata cccttaattg ctaattatga
     1321 attatagttt ctgtagttgt catattgcaa attgtgtaat atctttggtg catttgactt
     1381 tctaacagat ttagacattt gtttatacca aatttttctt agaagagaga atgataaatt
     1441 gttattgtat taggttcctc taaagttgtt cctacataga catcagttat ataaattata
     1501 tatggtcata caagcttatt gttctatgta cagaagcaat tagtcagatg ctgcttataa
     1561 tgtaatatga tactccgtaa tttgtttcta tacttgcttt gcaggactgc tttcaatggc
     1621 aaatgctgga aagaacgcca acgggttaca attcttcatc acaactgtcc caaccagctg
     1681 gtaatttgct tactgtcact taggatcaaa tgaaatatta atgaatctac atgctttgac
     1741 ttacatcttc tttaatgaat ctacatgcac ggttgaatat atttcttggt tcatgagggc
     1801 aaagctttct ataatattct tttcccatct tctactcacc tgccctaggt attacaatat
     1861 taaactgctg ttgggttgcc atcttaacca atactgataa tattttttat gagttcatta
     1921 aactaataat atgatttcta agatttatca atgcaagtga aggccgaatt tctgttgttg
     1981 ttgcgcgttc taagattcac ggattgtaag ttcagcattt cgttaagcta aatttcaagt
     2041 ttcttgcaca gattatataa atttaagcta aattttaata attgcgtacg ggctttactg
     2101 atcaaaatgc atagactttt agacatgtca atatgtgttc aagttgccat acttttttca
     2161 tgttcagcct ttgtaaacta agttgatttt ttacccacct aactctacca aagtaaaaca
     2221 tatcgtaagt cgaatagtcc atctttaagt gggtcgaata tccatctctt cattttttta
     2281 cttcattata aagtaatcag gccaattttt tccctttttt tctttttgtt tttttgaccg
     2341 gcaaagtgta taaactttgt tgaaaatata taaactattt tgctgctttg attaaaaata
     2401 ttatctattt acatggtctc cttattttgt attatttcag ttatatttat ttacatcaat
     2461 tggatgggaa gatggaatct cagtgaaggg cctgcttaca catagagccg atctccaaca
     2521 acaatatctc atgaattact gctggaaaga atgtgaaagt ttaagagaaa acatggagaa
     2581 aagaatagcc aatacgtggc gatccacaca ggtaaaccat cttcatttac ctgtgttaat
     2641 tttgatccgc taatggttaa atgggtcatt ggactattct ttggttccac caggtcatat
     2701 ttggattact gataaaaaag gaactactta tgggttgagt aggtctaact ggtcaaaagt
     2761 cacccaaaat tttataaaat tcttttaatc tttttattac aaaaaaaaaa ttgttattag
     2821 tataatgata caggttactt atttttaaaa tattggttaa attgtaaaag ttagcaaaga
     2881 atagtccaag acaacctctt aacacaattc ttctcatcct ttgttcgtaa ggtgagtaac
     2941 ggatccaatg ttatgttttg gttaccaaat gtgcaatcta atatggataa tcttttttct
     3001 agactttttg cgctcgaaaa aaaaaatcaa aaagtcactg ttgctgaaag aacttgctgg
     3061 attgaataga ttctaattga aaattgggat tggaacaatg taattcgggg tcgtgctgat
     3121 ggagatcttg gccatttaac tgatcatctc gcttcaactc ccaatctcaa tgaatctaaa
     3181 gatggatggg cctggatatt acattcaaaa gggagatttt agactaaatt tttatcttct
     3241 ttaatagata aatatatatt ttagatgtcg gtgctaacaa tttggtgact atgaaatggc
     3301 tacattgtat tccaataaaa gttaacatct ccggttggca tttattaaag gataggtcgg
     3361 ctacctgaac gaatttggag aaaagaggat ttccacttgt gtcaaaccta tgcccattat
     3421 gtgaagccga accagaatat tcgaatcata ttttcatgaa atgcaggttt gtagctcctc
     3481 tatggcgtaa ctatttatcg tggtggaata tttcgggctc aactcccaat ggtgttgcca
     3541 atgctgtgaa acccagctga ttgctgcggt ttttgacata aaaaaacgga attaagaaaa
     3601 acaaccacca tgaaaaagcg cctaaagaag tcttgtgcaa attgcaaaca ctcacatgag
     3661 atagtcaaag tttagaaact aagtgatatg actcaagaca atatttcgtg agcattaagt
     3721 ggattattga agttaatgat gaagttaata atgaaatata tatttttttt tttgaaaagc
     3781 aatgaaatat attttgtaga
//
LOCUS       XR_011756958            4802 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X9, ncRNA.
ACCESSION   XR_011756958
VERSION     XR_011756958.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4802
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4802
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4802
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccaggt cgaatcattc tttccaatat gaattatgta gtttgtgttt cattatttgt
     2461 tttaccgttg ctccgatgtt ggtaaatttt gatagtttgt aaaaatctgg gtgaaaaaga
     2521 ttatccgggc gagggggtta aatgaacagc tggttgagga agcaaatgcc aaattttcac
     2581 ttttgggtcc taccgtcttg gagtatgagg atttatctca atatattttt ataaagataa
     2641 tagtgattga gtgatattga tgtacattgt ttacgttttc ttatgtttct ttatcacttc
     2701 accgtagttg acatttgttc aataggctta tgtaataccc ttaattgcta attatgaatt
     2761 atagtttctg tagttgtcat attgcaaatt gtgtaatatc tttggtgcat ttgactttct
     2821 aacagattta gacatttgtt tataccaaat ttttcttaga agagagaatg ataaattgtt
     2881 attgtattag gttcctctaa agttgttcct acatagacat cagttatata aattatatat
     2941 ggtcatacaa gcttattgtt ctatgtacag aagcaattag tcagatgctg cttataatgt
     3001 aatatgatac tccgtaattt gtttctatac ttgctttgca ggactgcttt caatggcaaa
     3061 tgctggaaag aacgccaacg ggttacaatt cttcatcaca actgtcccaa ccagctggta
     3121 atttgcttac tgtcacttag gatcaaatga aatattaatg aatctacatg ctttgactta
     3181 catcttcttt aatgaatcta catgcacggt tgaatatatt tcttggttca tgagggcaaa
     3241 gctttctata atattctttt cccatcttct actcacctgc cctaggtatt acaatattaa
     3301 actgctgttg ggttgccatc ttaaccaata ctgataatat tttttatgag ttcattaaac
     3361 taataatatg atttctaaga tttatcaatg caagtgaagg ccgaatttct gttgttgttg
     3421 cgcgttctaa gattcacgga ttttatattt atttacatca attggatggg aagatggaat
     3481 ctcagtgaag ggcctgctta cacatagagc cgatctccaa caacaatatc tcatgaatta
     3541 ctgctggaaa gaatgtgaaa gtttaagaga aaacatggag aaaagaatag ccaatacgtg
     3601 gcgatccaca caggtaaacc atcttcattt acctgtgtta attttgatcc gctaatggtt
     3661 aaatgggtca ttggactatt ctttggttcc accaggtcat atttggatta ctgataaaaa
     3721 aggaactact tatgggttga gtaggtctaa ctggtcaaaa gtcacccaaa attttataaa
     3781 attcttttaa tctttttatt acaaaaaaaa aattgttatt agtataatga tacaggttac
     3841 ttatttttaa aatattggtt aaattgtaaa agttagcaaa gaatagtcca agacaacctc
     3901 ttaacacaat tcttctcatc ctttgttcgt aaggtgagta acggatccaa tgttatgttt
     3961 tggttaccaa atgtgcaatc taatatggat aatctttttt ctagactttt tgcgctcgaa
     4021 aaaaaaaatc aaaaagtcac tgttgctgaa agaacttgct ggattgaata gattctaatt
     4081 gaaaattggg attggaacaa tgtaattcgg ggtcgtgctg atggagatct tggccattta
     4141 actgatcatc tcgcttcaac tcccaatctc aatgaatcta aagatggatg ggcctggata
     4201 ttacattcaa aagggagatt ttagactaaa tttttatctt ctttaataga taaatatata
     4261 ttttagatgt cggtgctaac aatttggtga ctatgaaatg gctacattgt attccaataa
     4321 aagttaacat ctccggttgg catttattaa aggataggtc ggctacctga acgaatttgg
     4381 agaaaagagg atttccactt gtgtcaaacc tatgcccatt atgtgaagcc gaaccagaat
     4441 attcgaatca tattttcatg aaatgcaggt ttgtagctcc tctatggcgt aactatttat
     4501 cgtggtggaa tatttcgggc tcaactccca atggtgttgc caatgctgtg aaacccagct
     4561 gattgctgcg gtttttgaca taaaaaaacg gaattaagaa aaacaaccac catgaaaaag
     4621 cgcctaaaga agtcttgtgc aaattgcaaa cactcacatg agatagtcaa agtttagaaa
     4681 ctaagtgata tgactcaaga caatatttcg tgagcattaa gtggattatt gaagttaatg
     4741 atgaagttaa taatgaaata tatatttttt tttttgaaaa gcaatgaaat atattttgta
     4801 ga
//
LOCUS       XR_011756959            4604 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X10, ncRNA.
ACCESSION   XR_011756959
VERSION     XR_011756959.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4604
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4604
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4604
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccagga ctgctttcaa tggcaaatgc tggaaagaac gccaacgggt tacaattctt
     2461 catcacaact gtcccaacca gctggtaatt tgcttactgt cacttaggat caaatgaaat
     2521 attaatgaat ctacatgctt tgacttacat cttctttaat gaatctacat gcacggttga
     2581 atatatttct tggttcatga gggcaaagct ttctataata ttcttttccc atcttctact
     2641 cacctgccct aggtattaca atattaaact gctgttgggt tgccatctta accaatactg
     2701 ataatatttt ttatgagttc attaaactaa taatatgatt tctaagattt atcaatgcaa
     2761 gtgaaggccg aatttctgtt gttgttgcgc gttctaagat tcacggattg taagttcagc
     2821 atttcgttaa gctaaatttc aagtttcttg cacagattat ataaatttaa gctaaatttt
     2881 aataattgcg tacgggcttt actgatcaaa atgcatagac ttttagacat gtcaatatgt
     2941 gttcaagttg ccatactttt ttcatgttca gcctttgtaa actaagttga ttttttaccc
     3001 acctaactct accaaagtaa aacatatcgt aagtcgaata gtccatcttt aagtgggtcg
     3061 aatatccatc tcttcatttt tttacttcat tataaagtaa tcaggccaat tttttccctt
     3121 tttttctttt tgtttttttg accggcaaag tgtataaact ttgttgaaaa tatataaact
     3181 attttgctgc tttgattaaa aatattatct atttacatgg tctccttatt ttgtattatt
     3241 tcagttatat ttatttacat caattggatg ggaagatgga atctcagtga agggcctgct
     3301 tacacataga gccgatctcc aacaacaata tctcatgaat tactgctgga aagaatgtga
     3361 aagtttaaga gaaaacatgg agaaaagaat agccaatacg tggcgatcca cacaggtaaa
     3421 ccatcttcat ttacctgtgt taattttgat ccgctaatgg ttaaatgggt cattggacta
     3481 ttctttggtt ccaccaggtc atatttggat tactgataaa aaaggaacta cttatgggtt
     3541 gagtaggtct aactggtcaa aagtcaccca aaattttata aaattctttt aatcttttta
     3601 ttacaaaaaa aaaattgtta ttagtataat gatacaggtt acttattttt aaaatattgg
     3661 ttaaattgta aaagttagca aagaatagtc caagacaacc tcttaacaca attcttctca
     3721 tcctttgttc gtaaggtgag taacggatcc aatgttatgt tttggttacc aaatgtgcaa
     3781 tctaatatgg ataatctttt ttctagactt tttgcgctcg aaaaaaaaaa tcaaaaagtc
     3841 actgttgctg aaagaacttg ctggattgaa tagattctaa ttgaaaattg ggattggaac
     3901 aatgtaattc ggggtcgtgc tgatggagat cttggccatt taactgatca tctcgcttca
     3961 actcccaatc tcaatgaatc taaagatgga tgggcctgga tattacattc aaaagggaga
     4021 ttttagacta aatttttatc ttctttaata gataaatata tattttagat gtcggtgcta
     4081 acaatttggt gactatgaaa tggctacatt gtattccaat aaaagttaac atctccggtt
     4141 ggcatttatt aaaggatagg tcggctacct gaacgaattt ggagaaaaga ggatttccac
     4201 ttgtgtcaaa cctatgccca ttatgtgaag ccgaaccaga atattcgaat catattttca
     4261 tgaaatgcag gtttgtagct cctctatggc gtaactattt atcgtggtgg aatatttcgg
     4321 gctcaactcc caatggtgtt gccaatgctg tgaaacccag ctgattgctg cggtttttga
     4381 cataaaaaaa cggaattaag aaaaacaacc accatgaaaa agcgcctaaa gaagtcttgt
     4441 gcaaattgca aacactcaca tgagatagtc aaagtttaga aactaagtga tatgactcaa
     4501 gacaatattt cgtgagcatt aagtggatta ttgaagttaa tgatgaagtt aataatgaaa
     4561 tatatatttt tttttttgaa aagcaatgaa atatattttg taga
//
LOCUS       XR_011756960            3106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X11, ncRNA.
ACCESSION   XR_011756960
VERSION     XR_011756960.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3106
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..3106
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaagat atgggtagcc aaggctttaa ggctctgaat aatgggcaaa
      841 gattgggcat cacgtagcct atatctttgg gtggtccaag tgaagtatca agacaaacga
      901 gcttgaacag gactgctttc aatggcaaat gctggaaaga acgccaacgg gttacaattc
      961 ttcatcacaa ctgtcccaac cagctggtaa tttgcttact gtcacttagg atcaaatgaa
     1021 atattaatga atctacatgc tttgacttac atcttcttta atgaatctac atgcacggtt
     1081 gaatatattt cttggttcat gagggcaaag ctttctataa tattcttttc ccatcttcta
     1141 ctcacctgcc ctaggtatta caatattaaa ctgctgttgg gttgccatct taaccaatac
     1201 tgataatatt ttttatgagt tcattaaact aataatatga tttctaagat ttatcaatgc
     1261 aagtgaaggc cgaatttctg ttgttgttgc gcgttctaag attcacggat tgtaagttca
     1321 gcatttcgtt aagctaaatt tcaagtttct tgcacagatt atataaattt aagctaaatt
     1381 ttaataattg cgtacgggct ttactgatca aaatgcatag acttttagac atgtcaatat
     1441 gtgttcaagt tgccatactt ttttcatgtt cagcctttgt aaactaagtt gattttttac
     1501 ccacctaact ctaccaaagt aaaacatatc gtaagtcgaa tagtccatct ttaagtgggt
     1561 cgaatatcca tctcttcatt tttttacttc attataaagt aatcaggcca attttttccc
     1621 tttttttctt tttgtttttt tgaccggcaa agtgtataaa ctttgttgaa aatatataaa
     1681 ctattttgct gctttgatta aaaatattat ctatttacat ggtctcctta ttttgtatta
     1741 tttcagttat atttatttac atcaattgga tgggaagatg gaatctcagt gaagggcctg
     1801 cttacacata gagccgatct ccaacaacaa tatctcatga attactgctg gaaagaatgt
     1861 gaaagtttaa gagaaaacat ggagaaaaga atagccaata cgtggcgatc cacacaggta
     1921 aaccatcttc atttacctgt gttaattttg atccgctaat ggttaaatgg gtcattggac
     1981 tattctttgg ttccaccagg tcatatttgg attactgata aaaaaggaac tacttatggg
     2041 ttgagtaggt ctaactggtc aaaagtcacc caaaatttta taaaattctt ttaatctttt
     2101 tattacaaaa aaaaaattgt tattagtata atgatacagg ttacttattt ttaaaatatt
     2161 ggttaaattg taaaagttag caaagaatag tccaagacaa cctcttaaca caattcttct
     2221 catcctttgt tcgtaaggtg agtaacggat ccaatgttat gttttggtta ccaaatgtgc
     2281 aatctaatat ggataatctt ttttctagac tttttgcgct cgaaaaaaaa aatcaaaaag
     2341 tcactgttgc tgaaagaact tgctggattg aatagattct aattgaaaat tgggattgga
     2401 acaatgtaat tcggggtcgt gctgatggag atcttggcca tttaactgat catctcgctt
     2461 caactcccaa tctcaatgaa tctaaagatg gatgggcctg gatattacat tcaaaaggga
     2521 gattttagac taaattttta tcttctttaa tagataaata tatattttag atgtcggtgc
     2581 taacaatttg gtgactatga aatggctaca ttgtattcca ataaaagtta acatctccgg
     2641 ttggcattta ttaaaggata ggtcggctac ctgaacgaat ttggagaaaa gaggatttcc
     2701 acttgtgtca aacctatgcc cattatgtga agccgaacca gaatattcga atcatatttt
     2761 catgaaatgc aggtttgtag ctcctctatg gcgtaactat ttatcgtggt ggaatatttc
     2821 gggctcaact cccaatggtg ttgccaatgc tgtgaaaccc agctgattgc tgcggttttt
     2881 gacataaaaa aacggaatta agaaaaacaa ccaccatgaa aaagcgccta aagaagtctt
     2941 gtgcaaattg caaacactca catgagatag tcaaagttta gaaactaagt gatatgactc
     3001 aagacaatat ttcgtgagca ttaagtggat tattgaagtt aatgatgaag ttaataatga
     3061 aatatatatt tttttttttg aaaagcaatg aaatatattt tgtaga
//
LOCUS       XR_011756961            4477 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X12, ncRNA.
ACCESSION   XR_011756961
VERSION     XR_011756961.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4477
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4477
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X12"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccaggt cgaatcattc tttccaatat gaattatgta gtttgtgttt cattatttgt
     2461 tttaccgttg ctccgatgtt ggtaaatttt gatagtttgt aaaaatctgg gtgaaaaaga
     2521 ttatccgggc gagggggtta aatgaacagc tggttgagga agcaaatgcc aaattttcac
     2581 ttttgggtcc taccgtcttg gagtatgagg atttatctca atatattttt ataaagataa
     2641 tagtgattga gtgatattga tgtacattgt ttacgttttc ttatgtttct ttatcacttc
     2701 accgtagttg acatttgttc aataggctta tgtaataccc ttaattgcta attatgaatt
     2761 atagtttctg tagttgtcat attgcaaatt gtgtaatatc tttggtgcat ttgactttct
     2821 aacagattta gacatttgtt tataccaaat ttttcttaga agagagaatg ataaattgtt
     2881 attgtattag gttcctctaa agttgttcct acatagacat cagttatata aattatatat
     2941 ggtcatacaa gcttattgtt ctatgtacag aagcaattag tcagatgctg cttataatgt
     3001 aatatgatac tccgtaattt gtttctatac ttgctttgca ggactgcttt caatggcaaa
     3061 tgctggaaag aacgccaacg ggttacaatt cttcatcaca actgtcccaa ccagctgtta
     3121 tatttattta catcaattgg atgggaagat ggaatctcag tgaagggcct gcttacacat
     3181 agagccgatc tccaacaaca atatctcatg aattactgct ggaaagaatg tgaaagttta
     3241 agagaaaaca tggagaaaag aatagccaat acgtggcgat ccacacaggt aaaccatctt
     3301 catttacctg tgttaatttt gatccgctaa tggttaaatg ggtcattgga ctattctttg
     3361 gttccaccag gtcatatttg gattactgat aaaaaaggaa ctacttatgg gttgagtagg
     3421 tctaactggt caaaagtcac ccaaaatttt ataaaattct tttaatcttt ttattacaaa
     3481 aaaaaaattg ttattagtat aatgatacag gttacttatt tttaaaatat tggttaaatt
     3541 gtaaaagtta gcaaagaata gtccaagaca acctcttaac acaattcttc tcatcctttg
     3601 ttcgtaaggt gagtaacgga tccaatgtta tgttttggtt accaaatgtg caatctaata
     3661 tggataatct tttttctaga ctttttgcgc tcgaaaaaaa aaatcaaaaa gtcactgttg
     3721 ctgaaagaac ttgctggatt gaatagattc taattgaaaa ttgggattgg aacaatgtaa
     3781 ttcggggtcg tgctgatgga gatcttggcc atttaactga tcatctcgct tcaactccca
     3841 atctcaatga atctaaagat ggatgggcct ggatattaca ttcaaaaggg agattttaga
     3901 ctaaattttt atcttcttta atagataaat atatatttta gatgtcggtg ctaacaattt
     3961 ggtgactatg aaatggctac attgtattcc aataaaagtt aacatctccg gttggcattt
     4021 attaaaggat aggtcggcta cctgaacgaa tttggagaaa agaggatttc cacttgtgtc
     4081 aaacctatgc ccattatgtg aagccgaacc agaatattcg aatcatattt tcatgaaatg
     4141 caggtttgta gctcctctat ggcgtaacta tttatcgtgg tggaatattt cgggctcaac
     4201 tcccaatggt gttgccaatg ctgtgaaacc cagctgattg ctgcggtttt tgacataaaa
     4261 aaacggaatt aagaaaaaca accaccatga aaaagcgcct aaagaagtct tgtgcaaatt
     4321 gcaaacactc acatgagata gtcaaagttt agaaactaag tgatatgact caagacaata
     4381 tttcgtgagc attaagtgga ttattgaagt taatgatgaa gttaataatg aaatatatat
     4441 tttttttttt gaaaagcaat gaaatatatt ttgtaga
//
LOCUS       XR_011756962            5247 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X13, ncRNA.
ACCESSION   XR_011756962
VERSION     XR_011756962.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5247
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5247
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..5247
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X13"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccaggt cgaatcattc tttccaatat gaattatgta gtttgtgttt cattatttgt
     2461 tttaccgttg ctccgatgtt ggtaaatttt gatagtttgt aaaaatctgg gtgaaaaaga
     2521 ttatccgggc gagggggtta aatgaacagc tggttgagga agcaaatgcc aaattttcac
     2581 ttttgggtcc taccgtcttg gagtatgagg atttatctca atatattttt ataaagataa
     2641 tagtgattga gtgatattga tgtacattgt ttacgttttc ttatgtttct ttatcacttc
     2701 accgtagttg acatttgttc aataggctta tgtaataccc ttaattgcta attatgaatt
     2761 atagtttctg tagttgtcat attgcaaatt gtgtaatatc tttggtgcat ttgactttct
     2821 aacagattta gacatttgtt tataccaaat ttttcttaga agagagaatg ataaattgtt
     2881 attgtattag gttcctctaa agttgttcct acatagacat cagttatata aattatatat
     2941 ggtcatacaa gcttattgtt ctatgtacag aagcaattag tcagatgctg cttataatgt
     3001 aatatgatac tccgtaattt gtttctatac ttgctttgca ggactgcttt caatggcaaa
     3061 tgctggaaag aacgccaacg ggttacaatt cttcatcaca actgtcccaa ccagctggta
     3121 atttgcttac tgtcacttag gatcaaatga aatattaatg aatctacatg ctttgactta
     3181 catcttcttt aatgaatcta catgcacggt tgaatatatt tcttggttca tgagggcaaa
     3241 gctttctata atattctttt cccatcttct actcacctgc cctaggtatt acaatattaa
     3301 actgctgttg ggttgccatc ttaaccaata ctgataatat tttttatgag ttcattaaac
     3361 taataatatg atttctaaga tttatcaatg caagtgaagg ccgaatttct gttgttgttg
     3421 cgcgttctaa gattcacgga ttgtaagttc agcatttcgt taagctaaat ttcaagtttc
     3481 ttgcacagat tatataaatt taagctaaat tttaataatt gcgtacgggc tttactgatc
     3541 aaaatgcata gacttttaga catgtcaata tgtgttcaag ttgccatact tttttcatgt
     3601 tcagcctttg taaactaagt tgatttttta cccacctaac tctaccaaag taaaacatat
     3661 cgtaagtcga atagtccatc tttaagtggg tcgaatatcc atctcttcat ttttttactt
     3721 cattataaag taatcaggcc aattttttcc ctttttttct ttttgttttt ttgaccggca
     3781 aagtgtataa actttgttga aaatatataa actattttgc tgctttgatt aaaaatatta
     3841 tctatttaca tggtctcctt attttgtatt atttcagtta tatttattta catcaattgg
     3901 atgggaagat ggaatctcag tgaagggcct gcttacacat agagccgatc tccaacaaca
     3961 atatctcatg aattactgct ggaaagaatg tgaaagttta agagaaaaca tggagaaaag
     4021 aatagccaat acgtggcgat ccacacaggt aaaccatctt catttacctg tgttaatttt
     4081 gatccgctaa tggttaaatg ggtcattgga ctattctttg gttccaccag gtcatatttg
     4141 gattactgat aaaaaaggaa ctacttatgg gttgagtagg tctaactggt caaaagtcac
     4201 ccaaaatttt ataaaattct tttaatcttt ttattacaaa aaaaaaattg ttattagtat
     4261 aatgatacag gttacttatt tttaaaatat tggttaaatt gtaaaagtta gcaaagaata
     4321 gtccaagaca acctcttaac acaattcttc tcatcctttg ttcgtaaggt gagtaacgga
     4381 tccaatgtta tgttttggtt accaaatgtg caatctaata tggataatct tttttctaga
     4441 ctttttgcgc tcgaaaaaaa aaatcaaaaa gtcactgttg ctgaaagaac ttgctggatt
     4501 gaatagattc taattgaaaa ttgggattgg aacaatgtaa ttcggggtcg tgctgatgga
     4561 gatcttggcc atttaactga tcatctcgct tcaactccca atctcaatga atctaaagat
     4621 ggatgggcct ggatattaca ttcaaaaggg agattttaga ctaaattttt atcttcttta
     4681 atagataaat atatatttta gatgtcggtg ctaacaattt ggtgactatg aaatggctac
     4741 attgtattcc aataaaagtt aacatctccg gttggcattt attaaaggat aggtcggcta
     4801 cctgaacgaa tttggagaaa agaggatttc cacttgtgtc aaacctatgc ccattatgtg
     4861 aagccgaacc agaatattcg aatcatattt tcatgaaatg caggtttgta gctcctctat
     4921 ggcgtaacta tttatcgtgg tggaatattt cgggctcaac tcccaatggt gttgccaatg
     4981 ctgtaagctc tggtgaaacc cagctgattg ctgcggtttt tgacataaaa aaacggaatt
     5041 aagaaaaaca accaccatga aaaagcgcct aaagaagtct tgtgcaaatt gcaaacactc
     5101 acatgagata gtcaaagttt agaaactaag tgatatgact caagacaata tttcgtgagc
     5161 attaagtgga ttattgaagt taatgatgaa gttaataatg aaatatatat tttttttttt
     5221 gaaaagcaat gaaatatatt ttgtaga
//
LOCUS       XR_011756963            4540 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X14, ncRNA.
ACCESSION   XR_011756963
VERSION     XR_011756963.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4540
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..4540
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X14"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccaggt cgaatcattc tttccaatat gaattatgta gtttgtgttt cattatttgt
     2461 tttaccgttg ctccgatgtt ggtaaatttt gatagtttgt aaaaatctgg gtgaaaaaga
     2521 ttatccgggc gagggggtta aatgaacagc tggttgagga agcaaatgcc aaattttcac
     2581 ttttgggtcc taccgtcttg gagtatgagg atttatctca atatattttt ataaagataa
     2641 tagtgattga gtgatattga tgtacattgt ttacgttttc ttatgtttct ttatcacttc
     2701 accgtagttg acatttgttc aataggctta tgtaataccc ttaattgcta attatgaatt
     2761 atagtttctg tagttgtcat attgcaaatt gtgtaatatc tttggtgcat ttgactttct
     2821 aacagattta gacatttgtt tataccaaat ttttcttaga agagagaatg ataaattgtt
     2881 attgtattag gttcctctaa agttgttcct acatagacat cagttatata aattatatat
     2941 ggtcatacaa gcttattgtt ctatgtacag aagcaattag tcagatgctg cttataatgt
     3001 aatatgatac tccgtaattt gtttctatac ttgctttgca ggactgcttt caatggcaaa
     3061 tgctggaaag aacgccaacg ggttacaatt cttcatcaca actgtcccaa ccagctgatt
     3121 tatcaatgca agtgaaggcc gaatttctgt tgttgttgcg cgttctaaga ttcacggatt
     3181 ttatatttat ttacatcaat tggatgggaa gatggaatct cagtgaaggg cctgcttaca
     3241 catagagccg atctccaaca acaatatctc atgaattact gctggaaaga atgtgaaagt
     3301 ttaagagaaa acatggagaa aagaatagcc aatacgtggc gatccacaca ggtaaaccat
     3361 cttcatttac ctgtgttaat tttgatccgc taatggttaa atgggtcatt ggactattct
     3421 ttggttccac caggtcatat ttggattact gataaaaaag gaactactta tgggttgagt
     3481 aggtctaact ggtcaaaagt cacccaaaat tttataaaat tcttttaatc tttttattac
     3541 aaaaaaaaaa ttgttattag tataatgata caggttactt atttttaaaa tattggttaa
     3601 attgtaaaag ttagcaaaga atagtccaag acaacctctt aacacaattc ttctcatcct
     3661 ttgttcgtaa ggtgagtaac ggatccaatg ttatgttttg gttaccaaat gtgcaatcta
     3721 atatggataa tcttttttct agactttttg cgctcgaaaa aaaaaatcaa aaagtcactg
     3781 ttgctgaaag aacttgctgg attgaataga ttctaattga aaattgggat tggaacaatg
     3841 taattcgggg tcgtgctgat ggagatcttg gccatttaac tgatcatctc gcttcaactc
     3901 ccaatctcaa tgaatctaaa gatggatggg cctggatatt acattcaaaa gggagatttt
     3961 agactaaatt tttatcttct ttaatagata aatatatatt ttagatgtcg gtgctaacaa
     4021 tttggtgact atgaaatggc tacattgtat tccaataaaa gttaacatct ccggttggca
     4081 tttattaaag gataggtcgg ctacctgaac gaatttggag aaaagaggat ttccacttgt
     4141 gtcaaaccta tgcccattat gtgaagccga accagaatat tcgaatcata ttttcatgaa
     4201 atgcaggttt gtagctcctc tatggcgtaa ctatttatcg tggtggaata tttcgggctc
     4261 aactcccaat ggtgttgcca atgctgtgaa acccagctga ttgctgcggt ttttgacata
     4321 aaaaaacgga attaagaaaa acaaccacca tgaaaaagcg cctaaagaag tcttgtgcaa
     4381 attgcaaaca ctcacatgag atagtcaaag tttagaaact aagtgatatg actcaagaca
     4441 atatttcgtg agcattaagt ggattattga agttaatgat gaagttaata atgaaatata
     4501 tatttttttt tttgaaaagc aatgaaatat attttgtaga
//
LOCUS       XR_011756964            3844 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839463), transcript variant X15, ncRNA.
ACCESSION   XR_011756964
VERSION     XR_011756964.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3844
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3844
                     /gene="LOC139839463"
                     /note="uncharacterized LOC139839463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839463"
     ncRNA           1..3844
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839463"
                     /product="uncharacterized lncRNA, transcript variant X15"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839463"
ORIGIN      
        1 aggtttgtct agtaagtagt taatatgttg atgttaattt gatggatttt tatatgtggg
       61 cctgtctttt gttttatcaa aatataatgg gccaaggtga caattaactg tgacccaatc
      121 cgggccatat agtatagtta aaaaataaaa taggattttt gttaacctag atctaaaatc
      181 acttcctttc tctctcacaa atctgaaatc tcatctaaaa tcactcattt cctccctcac
      241 aaatacgacc ttccacttca aaaatctaca ggccagagca tagtttaaaa tatgattttt
      301 gttatccaaa ttcgggcaag attcggtttg ttgattgttt tagcatgaaa aatattaaat
      361 ttttaagtgg ggcgtgtatg ggttcggaag gatcaagata ggaatgaaca cggtagccac
      421 tcacgtcagt tgacggcata taagtttcgg ttaacaaatc tttttttcaa ctttagtgac
      481 atcaaatagt gttgggaagc ttttagcatc aagtaaaacg acgactttcg ggttgttaga
      541 aatgaatggg cgaggtgcat gtttgaacag aacaccgtgg actcgagttt ttgtacacgg
      601 gatttaaaga atttatcact gccgccggtg ccgaaaaaat attcgaaacg gtcttttagt
      661 ggttgaaaat atggaatgcc gtaggacccg gggatcggtc ggagagggag gttggtggtg
      721 gagctgccgg ttcgtttgct gacggtagtt agctggtggt tgtgggtttt gggtggatcg
      781 ggtggaaaga agggaaaggt aatgtagaca tggctggttc attttttttt tttttttatt
      841 ttttttttga ctaaatttaa gtttgatttt gatgatataa aacttgtgag ttgttactgt
      901 gtatagagga atgaacgcgt gtgcattgat ggttgtacta ttgatttgga agaagttaaa
      961 ttggcccaag gtggttatac tgaatgtgtt agtgttggct ttaaaaaggg agaaaaaagt
     1021 tgtcaaatta cgttattaac cttgtgaaca gttagtatta gctgtataaa gggggaaaag
     1081 gttgtcaaat tacgttatta ccattgtgaa cagtgttagt gtcatcataa ttattatagt
     1141 ttataataat ataattataa tataataatt ataatataat gtgactaact tgtctctcac
     1201 aataaacccc atccaccatc caactctttc tacttaaaga gtaccattgt caatatctat
     1261 ctattattat tatttattta tttttatttt attacatatt ataaattgtg aaacttaatc
     1321 ccatgtggca cttcatgatt aattcttaat caagaatgct gacgtctaaa aaccttaatt
     1381 aatcacaatt agcataatta atcaagagaa aatccacgtt ggcatctaaa atcctgaagg
     1441 aaaaaacacg cagtagaatt cccccatctc tcttctccta tgtatccatc tgctacaaac
     1501 cctaatacat gattgattca acctgacaac ataatcgcaa tcaatcagat aaaacagaaa
     1561 actaatcgca agaagcgttg atcatctctc ttcgatcaga aaactcaaac aaaaacgtac
     1621 agatttccaa ttccaggacg aaatcggaat tcaaattcgc tggaagaaat cggaattcaa
     1681 aacgctggaa gaaatcggaa ttcaaattcg ctggtcggcg tggttttcag caacttttat
     1741 tggcgcatat tatacgtcac ttcatcctca ccttctaacc ttccgattaa atttgaatta
     1801 ttgtgtatgt tgtttttatg tttttttatt tgcaattatt cagaattttc ttaggttatt
     1861 aaattttcag aatcaaatcg ttgttcaatt gttatgtcga agagccttat taaattctca
     1921 ccttcttacc ttatttggtt aggtttttcc agtagtgatg tctaattaca acatgttgaa
     1981 agtttttctt cttgatcagt ttctgtttgt agaattaggc taaattatga tggtctgcga
     2041 tatacttata cattactaat aataaggagg atcatacatt gtgaagtatt tctaatttct
     2101 ttttcgcgtt tgttatgtgt gcctggttaa aattgaggga aaatattcaa gtaactatct
     2161 ataaattttg ttcatagctg tctaaaaatt tccttcttca taagagtttt tcttttttta
     2221 atttttttta ccaagatatg ggtagccaag gctttaaggc tctgaataat gggcaaagat
     2281 tgggcatcac gtagcctata tctttgggtg gtccaagtga agtatcaaga caaacgagct
     2341 tgaacagact atttgagatt cataaagagg ccataagttg ggaagaagtt ttaggacggt
     2401 tcgaccagga ctgctttcaa tggcaaatgc tggaaagaac gccaacgggt tacaattctt
     2461 catcacaact gtcccaacca gctgttatat ttatttacat caattggatg ggaagatgga
     2521 atctcagtga agggcctgct tacacataga gccgatctcc aacaacaata tctcatgaat
     2581 tactgctgga aagaatgtga aagtttaaga gaaaacatgg agaaaagaat agccaatacg
     2641 tggcgatcca cacaggtaaa ccatcttcat ttacctgtgt taattttgat ccgctaatgg
     2701 ttaaatgggt cattggacta ttctttggtt ccaccaggtc atatttggat tactgataaa
     2761 aaaggaacta cttatgggtt gagtaggtct aactggtcaa aagtcaccca aaattttata
     2821 aaattctttt aatcttttta ttacaaaaaa aaaattgtta ttagtataat gatacaggtt
     2881 acttattttt aaaatattgg ttaaattgta aaagttagca aagaatagtc caagacaacc
     2941 tcttaacaca attcttctca tcctttgttc gtaaggtgag taacggatcc aatgttatgt
     3001 tttggttacc aaatgtgcaa tctaatatgg ataatctttt ttctagactt tttgcgctcg
     3061 aaaaaaaaaa tcaaaaagtc actgttgctg aaagaacttg ctggattgaa tagattctaa
     3121 ttgaaaattg ggattggaac aatgtaattc ggggtcgtgc tgatggagat cttggccatt
     3181 taactgatca tctcgcttca actcccaatc tcaatgaatc taaagatgga tgggcctgga
     3241 tattacattc aaaagggaga ttttagacta aatttttatc ttctttaata gataaatata
     3301 tattttagat gtcggtgcta acaatttggt gactatgaaa tggctacatt gtattccaat
     3361 aaaagttaac atctccggtt ggcatttatt aaaggatagg tcggctacct gaacgaattt
     3421 ggagaaaaga ggatttccac ttgtgtcaaa cctatgccca ttatgtgaag ccgaaccaga
     3481 atattcgaat catattttca tgaaatgcag gtttgtagct cctctatggc gtaactattt
     3541 atcgtggtgg aatatttcgg gctcaactcc caatggtgtt gccaatgctg tgaaacccag
     3601 ctgattgctg cggtttttga cataaaaaaa cggaattaag aaaaacaacc accatgaaaa
     3661 agcgcctaaa gaagtcttgt gcaaattgca aacactcaca tgagatagtc aaagtttaga
     3721 aactaagtga tatgactcaa gacaatattt cgtgagcatt aagtggatta ttgaagttaa
     3781 tgatgaagtt aataatgaaa tatatatttt tttttttgaa aagcaatgaa atatattttg
     3841 taga
//
LOCUS       XM_071829526            2065 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides citrate synthase,
            glyoxysomal-like (LOC139839464), mRNA.
ACCESSION   XM_071829526
VERSION     XM_071829526.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2065
                     /gene="LOC139839464"
                     /note="citrate synthase, glyoxysomal-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139839464"
     CDS             150..1733
                     /gene="LOC139839464"
                     /codon_start=1
                     /product="citrate synthase, glyoxysomal-like"
                     /protein_id="XP_071685627.1"
                     /db_xref="GeneID:139839464"
                     /translation="MGVELIASDNIDNNNNSKPSIVARGRLAVLSAHLSACIEPNDFT
                     PVLESSPVSAQVFVSPPPNLKGSLTIADDRTGKKYKIQVSDHGTVKATDLKKITTGDN
                     DKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLDVAYLLMYGN
                     LPSQSQLADWEFTVAQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSVFHPDANPA
                     LRGQDLYKSKPLRDKQIVRILGKAPTIAAAAYLRMAGRPPVLPSSNLSYSENFLYMLD
                     SLGDKAYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVDVYTALAGAVGALY
                     GPLHGGANEAVLKMLNEIGNVDNIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKK
                     LADEVFSIVGRDPLIEVAIALEQAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFF
                     PVLFAIPRMAGYLSHWRESLDDPDTKIMRPAQVYTGVWMRHYIPAQERMSSTDAVVDK
                     LGQLSVSNATRRRLSGSGI"
     misc_feature    285..1646
                     /gene="LOC139839464"
                     /note="citrate synthase; Region: PLN02456"
                     /db_xref="CDD:215250"
     polyA_site      2065
                     /gene="LOC139839464"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccctaggaat atcaatagaa aaaacagaaa taaaaatgat tatcccataa tataaataca
       61 gcttaccaaa aaatttggtc gatcaatttc acaagcaaca ccccatcttc cattttattt
      121 cttcaaagtt ttgacaaatc aacacagaaa tgggagttga attaatagca tcagataata
      181 ttgataacaa taataatagc aaaccaagta ttgttgctcg tgggcgatta gctgtattat
      241 cagctcatct ttctgcttgt attgaaccca atgatttcac accagttctt gaatcatcac
      301 ctgtttctgc tcaagttttt gtatcaccac ccccaaattt aaaaggatct ttaaccattg
      361 ctgatgatag aaccggcaaa aagtacaaaa ttcaagtttc cgatcacggt accgtcaaag
      421 ccaccgactt aaaaaagata acaactggag ataatgataa gggtttgaag ctttatgatc
      481 cggggtatct caatacggct cctgttcgat catcgatttg ctacattgat ggtgatgaag
      541 ggattttgag gtacagaggg tacccaattg aagagttggc cgaaagtagt tcgttcttag
      601 atgtagccta ccttttaatg tacgggaact taccgtctca gagccaatta gcagactggg
      661 agttcactgt agcgcaacat tcagctgttc cacagggtat tttggatatc attcaagcta
      721 tgcctcatga tgctcatcca atgggcgttt tagttagtgc aatgagtgca ctttctgtat
      781 tccatccaga tgcaaaccct gctcttagag gtcaagatct gtacaaatct aagccattgc
      841 gtgacaagca aatagttcgc atacttggga aggcgccgac tattgcagca gcagcgtatc
      901 ttcggatggc gggacggcct cccgttcttc cttctagcaa cctttcttac tcggagaact
      961 tcttatacat gctagattca ttaggtgata aggcttataa acccaatcca agacttgcta
     1021 gagtactcga tattcttttt atattgcatg cggaacatga gatgaactgt tccacagcag
     1081 cagcccgaca tcttgcatcg agtggcgttg atgtatacac agctcttgct ggagcggttg
     1141 gagcactgta cggtcctctc catggtggag caaatgaggc ggtgctaaag atgctgaatg
     1201 agattggtaa tgttgacaac atcccagagt tcattgaagg tgtgaaaaac aggaaacgta
     1261 aaatgtcggg atttggacat cgtgtgtaca aaaactatga tcccagagca aaggttatta
     1321 agaagctggc agacgaggtt ttctcgattg taggcaggga cccgcttatt gaggtagcta
     1381 ttgcgttgga gcaagctgca ctatcagatg aatattttgt taaacgcaag ttgtacccga
     1441 atgttgattt ctattctggg ctgatctata gggctatggg ttttccaact gagtttttcc
     1501 ctgttctatt tgcgattcct cgcatggctg gctacttgtc tcactggcgc gagtcacttg
     1561 atgatcctga cacgaagatc atgaggcctg ctcaggtata tacgggtgtg tggatgcgcc
     1621 attacattcc tgcacaagaa cggatgtcgt caactgatgc tgtagtcgat aagctaggcc
     1681 agctatcggt ctccaatgct acacgaagga ggttatctgg ctctgggatc taagctaata
     1741 tattgatatt tgagtgatgg tgtatcttat tatgccttca actggtgtat cttggtcatg
     1801 ttctattata atttatatat tttatatttt atatatatta ttattgtatg gtgctggtaa
     1861 taatggatga tcaagtgcat gttgaactcc tctttaatat gaattctagt atttggctgt
     1921 caatggacaa taaaaacacc ttcacacttg tttgcatatg atagtgaact tctgtttcgc
     1981 tatgttttat tgacacagtg caaaagcata taatgtgatc ttccatatat cttttttttt
     2041 tattaaattt gttttttgca cttca
//
LOCUS       XM_071829527            1464 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839465), transcript variant X1, mRNA.
ACCESSION   XM_071829527
VERSION     XM_071829527.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1464
                     /gene="LOC139839465"
                     /note="uncharacterized LOC139839465; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839465"
     CDS             219..1055
                     /gene="LOC139839465"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685628.1"
                     /db_xref="GeneID:139839465"
                     /translation="MQLMSNDNPREGGSSEEAEPILNESKNAAAAAERGDNHSSSSSS
                     SSSSTFEIRRVASSDCLIAVEEDSHDGSDNDDVNENSSLVTSDQSQCRICLDTEGEDL
                     IAPCHCRGTQKYVHRSCLDNWRSTREGFAFSHCTECRAVFILRANVPPDRWWLRLKFQ
                     LLVARDHAFIFVIVQLIVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVG
                     LLYGFFIAIICGQRINERHYHILAKQELTKEYIVEDREVNKDAAELDPSHVTELRMLG
                     LY"
     misc_feature    489..635
                     /gene="LOC139839465"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); Region:
                     RING_CH-C4HC3_MARCH; cd16495"
                     /db_xref="CDD:438158"
ORIGIN      
        1 aagcgagatt ctaatttgct atcgttaagt ccctattcaa atcgagttat ttttggagat
       61 ctcctttgga cagatcttca ttgaccggcc gatactttgt tcagacttag ggttcattat
      121 cccccgaatt tatataaatt tgctttttgt gttgaaatgg taaattggag aaacttgttt
      181 gtaagttgtg gttggatcca gattgtacgt gtctcaagat gcaactaatg tcaaatgaca
      241 atccaagaga aggcggctct tcagaagaag cagaacccat cttaaatgag tctaaaaatg
      301 ctgctgctgc tgctgagaga ggtgacaacc attcatcatc atcatcatca tcatcatcat
      361 ctacatttga aataagacgt gtagctagca gcgattgttt gatagctgta gaagaagatt
      421 cacatgatgg ttctgataat gatgacgtta atgaaaattc tagtctggta acttctgacc
      481 aatcacagtg ccgcatatgc cttgatacgg aaggagaaga tttgattgcg ccatgccatt
      541 gtagaggcac ccagaaatat gtccataggt cttgtcttga taattggagg tcaaccaggg
      601 aaggttttgc tttctctcac tgcacggaat gtagggcagt gtttatacta cgagcaaatg
      661 tcccacctga tcgctggtgg ttgaggttaa aatttcagtt gctggttgca agagatcatg
      721 cattcatttt cgtcattgtt caactgattg ttgcattctt aggtgtcttg gtctataagt
      781 tttatggaga tgaacttaga gaaatgtttg gatatgaaga gcacccttat ggcttttata
      841 cgatggctgt cttagcaatc gttttggtgg gcttgctcta tggtttcttt atagccataa
      901 tttgtggaca gcgaatcaat gaacgccact atcacatcct tgcaaaacaa gaactgacaa
      961 aggaatacat tgtcgaagac agagaagtca acaaggatgc tgccgaactt gaccctagcc
     1021 atgttacaga gctaagaatg ttgggtctct actgagttat caattcgcag atgattttgg
     1081 atacttgttg aaacttagat actggtgtgg gctggcattc aggattgaag accccaggtc
     1141 accccctttg aagctgttgt taatgtagtt gcattaagag tatatacatt gagagagcat
     1201 atggaaattg aattgaagtt gtatattgtt cttctatatt gtgttatagt tttaattttc
     1261 acacgtacag atgatcaatt catcccttta tgtgtgtttg gtgccccaaa cacatttgtt
     1321 tttttttttt tttttttttt tttgtacggc aagtgtagtc tttcaaggat taactgcaga
     1381 cttgtaccat ttgtttaaac gataagtaac ttgtgttgaa tgttttaaac atgcacaatt
     1441 tgataccaat tgtgtatatt gcat
//
LOCUS       XM_071829528            2756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839465), transcript variant X2, mRNA.
ACCESSION   XM_071829528
VERSION     XM_071829528.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2756
                     /gene="LOC139839465"
                     /note="uncharacterized LOC139839465; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839465"
     CDS             1511..2347
                     /gene="LOC139839465"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685629.1"
                     /db_xref="GeneID:139839465"
                     /translation="MQLMSNDNPREGGSSEEAEPILNESKNAAAAAERGDNHSSSSSS
                     SSSSTFEIRRVASSDCLIAVEEDSHDGSDNDDVNENSSLVTSDQSQCRICLDTEGEDL
                     IAPCHCRGTQKYVHRSCLDNWRSTREGFAFSHCTECRAVFILRANVPPDRWWLRLKFQ
                     LLVARDHAFIFVIVQLIVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVG
                     LLYGFFIAIICGQRINERHYHILAKQELTKEYIVEDREVNKDAAELDPSHVTELRMLG
                     LY"
     misc_feature    1781..1927
                     /gene="LOC139839465"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); Region:
                     RING_CH-C4HC3_MARCH; cd16495"
                     /db_xref="CDD:438158"
ORIGIN      
        1 caatatttta tcatttatcc cattaataaa acgtcctatg tacattaagc agctgattgt
       61 tataggtttc ttaatcgtaa ttattggtct tcatcttcta gaaattttta gttgacctca
      121 catttgcgtt ttgtatggat cccagaacca cttattctat ggtcatctaa taaccagtta
      181 ctgattggta ttagtggcca ataacaaccg aaaccgaacc gaattgtgag ccgtaaccaa
      241 aaggtttcta aatcctaaat aactgatgtt aatggtttgg gttagtcatt cgggttgttg
      301 ttaggtcttc aagtttctgc attttgtgga attgcgatat ttgtcaggtt ttggtgtttg
      361 gatctgtttt ggttattgat ctaagccaaa atttaccggt taagaaactt gttatacagg
      421 tgaccaaaat aatcgataat aatgagaata ccaactatca aagaaatgtc atgatacaag
      481 tgaccgaagt aattgataaa cagaattcac cggtgaattt tggcttgatc agttatatgt
      541 ttgtgtgtac gtgcccgcgc gcgtgtgtgt gtgtgtgtgt gtgtgtttca gtctttttaa
      601 gaatggaaag ctaaagaatt acaaaaaact gaactgaatc aagaacggcc aaattgatat
      661 aagtatcaga gatattgtat gtgggtgtgg gtgtgtgtgt atgtgtgggt ttttttaaga
      721 atgaaaactg aatagttaca aaaaactgaa ctgaatcaag aacagccaga ttgatataag
      781 taacaaagat atcattaatg gtagctggca agctacttgt ttattcgaga cttgggatgg
      841 tggtggagat agtgagcaat tgctagattt agtggaagag tgtgaataca aagatgtata
      901 gcggtggcgt tggtggtgtg aaagagaaga aaagtcgttt tgtgttatat ttctgctttt
      961 atagtaacag tatcaacaga gaatatgctg tgtggttaaa aaggtggaaa atttaagaag
     1021 ttgaccgcat ttgttttatt taataatata catatatatg taagtcatta tgtatataga
     1081 aaataataat ttcagttaac tgaactttcg ttcaccaact cggtttgtac atatatctac
     1141 aaaaatgcat caaggaatgt aagaccacac cttgatcccc tgaatgaact ttggaaggaa
     1201 aaaacaacca tagagggcct ataaatagag atttggatag aaatgtgcta tttgccatta
     1261 gcatgagtca aataaaaatt taacctataa tggttttatg aattgaacat aactagagca
     1321 taccaagtca aactggtaca gctgatatgg ttctctttat cttgcaactg atttcataca
     1381 agacatagtt tggttgagac catgttcact aatgttattc ttcgctgaaa tttgcttttt
     1441 gtgttgaaat ggtaaattgg agaaacttgt ttgtaagttg tggttggatc cagattgtac
     1501 gtgtctcaag atgcaactaa tgtcaaatga caatccaaga gaaggcggct cttcagaaga
     1561 agcagaaccc atcttaaatg agtctaaaaa tgctgctgct gctgctgaga gaggtgacaa
     1621 ccattcatca tcatcatcat catcatcatc atctacattt gaaataagac gtgtagctag
     1681 cagcgattgt ttgatagctg tagaagaaga ttcacatgat ggttctgata atgatgacgt
     1741 taatgaaaat tctagtctgg taacttctga ccaatcacag tgccgcatat gccttgatac
     1801 ggaaggagaa gatttgattg cgccatgcca ttgtagaggc acccagaaat atgtccatag
     1861 gtcttgtctt gataattgga ggtcaaccag ggaaggtttt gctttctctc actgcacgga
     1921 atgtagggca gtgtttatac tacgagcaaa tgtcccacct gatcgctggt ggttgaggtt
     1981 aaaatttcag ttgctggttg caagagatca tgcattcatt ttcgtcattg ttcaactgat
     2041 tgttgcattc ttaggtgtct tggtctataa gttttatgga gatgaactta gagaaatgtt
     2101 tggatatgaa gagcaccctt atggctttta tacgatggct gtcttagcaa tcgttttggt
     2161 gggcttgctc tatggtttct ttatagccat aatttgtgga cagcgaatca atgaacgcca
     2221 ctatcacatc cttgcaaaac aagaactgac aaaggaatac attgtcgaag acagagaagt
     2281 caacaaggat gctgccgaac ttgaccctag ccatgttaca gagctaagaa tgttgggtct
     2341 ctactgagtt atcaattcgc agatgatttt ggatacttgt tgaaacttag atactggtgt
     2401 gggctggcat tcaggattga agaccccagg tcaccccctt tgaagctgtt gttaatgtag
     2461 ttgcattaag agtatataca ttgagagagc atatggaaat tgaattgaag ttgtatattg
     2521 ttcttctata ttgtgttata gttttaattt tcacacgtac agatgatcaa ttcatccctt
     2581 tatgtgtgtt tggtgcccca aacacatttg tttttttttt tttttttttt tttttgtacg
     2641 gcaagtgtag tctttcaagg attaactgca gacttgtacc atttgtttaa acgataagta
     2701 acttgtgttg aatgttttaa acatgcacaa tttgatacca attgtgtata ttgcat
//
LOCUS       XM_071829529            1395 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839465), transcript variant X3, mRNA.
ACCESSION   XM_071829529
VERSION     XM_071829529.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1395
                     /gene="LOC139839465"
                     /note="uncharacterized LOC139839465; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839465"
     CDS             150..986
                     /gene="LOC139839465"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685630.1"
                     /db_xref="GeneID:139839465"
                     /translation="MQLMSNDNPREGGSSEEAEPILNESKNAAAAAERGDNHSSSSSS
                     SSSSTFEIRRVASSDCLIAVEEDSHDGSDNDDVNENSSLVTSDQSQCRICLDTEGEDL
                     IAPCHCRGTQKYVHRSCLDNWRSTREGFAFSHCTECRAVFILRANVPPDRWWLRLKFQ
                     LLVARDHAFIFVIVQLIVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVG
                     LLYGFFIAIICGQRINERHYHILAKQELTKEYIVEDREVNKDAAELDPSHVTELRMLG
                     LY"
     misc_feature    420..566
                     /gene="LOC139839465"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); Region:
                     RING_CH-C4HC3_MARCH; cd16495"
                     /db_xref="CDD:438158"
ORIGIN      
        1 cattgtttca ctaatcaata tgacgaatct atgtgaatag ttaacatgct tgtctaaatc
       61 ttgcagaaat ttgctttttg tgttgaaatg gtaaattgga gaaacttgtt tgtaagttgt
      121 ggttggatcc agattgtacg tgtctcaaga tgcaactaat gtcaaatgac aatccaagag
      181 aaggcggctc ttcagaagaa gcagaaccca tcttaaatga gtctaaaaat gctgctgctg
      241 ctgctgagag aggtgacaac cattcatcat catcatcatc atcatcatca tctacatttg
      301 aaataagacg tgtagctagc agcgattgtt tgatagctgt agaagaagat tcacatgatg
      361 gttctgataa tgatgacgtt aatgaaaatt ctagtctggt aacttctgac caatcacagt
      421 gccgcatatg ccttgatacg gaaggagaag atttgattgc gccatgccat tgtagaggca
      481 cccagaaata tgtccatagg tcttgtcttg ataattggag gtcaaccagg gaaggttttg
      541 ctttctctca ctgcacggaa tgtagggcag tgtttatact acgagcaaat gtcccacctg
      601 atcgctggtg gttgaggtta aaatttcagt tgctggttgc aagagatcat gcattcattt
      661 tcgtcattgt tcaactgatt gttgcattct taggtgtctt ggtctataag ttttatggag
      721 atgaacttag agaaatgttt ggatatgaag agcaccctta tggcttttat acgatggctg
      781 tcttagcaat cgttttggtg ggcttgctct atggtttctt tatagccata atttgtggac
      841 agcgaatcaa tgaacgccac tatcacatcc ttgcaaaaca agaactgaca aaggaataca
      901 ttgtcgaaga cagagaagtc aacaaggatg ctgccgaact tgaccctagc catgttacag
      961 agctaagaat gttgggtctc tactgagtta tcaattcgca gatgattttg gatacttgtt
     1021 gaaacttaga tactggtgtg ggctggcatt caggattgaa gaccccaggt cacccccttt
     1081 gaagctgttg ttaatgtagt tgcattaaga gtatatacat tgagagagca tatggaaatt
     1141 gaattgaagt tgtatattgt tcttctatat tgtgttatag ttttaatttt cacacgtaca
     1201 gatgatcaat tcatcccttt atgtgtgttt ggtgccccaa acacatttgt tttttttttt
     1261 tttttttttt ttttgtacgg caagtgtagt ctttcaagga ttaactgcag acttgtacca
     1321 tttgtttaaa cgataagtaa cttgtgttga atgttttaaa catgcacaat ttgataccaa
     1381 ttgtgtatat tgcat
//
LOCUS       XM_071829530            1458 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839465), transcript variant X4, mRNA.
ACCESSION   XM_071829530
VERSION     XM_071829530.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1458
                     /gene="LOC139839465"
                     /note="uncharacterized LOC139839465; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839465"
     CDS             219..1049
                     /gene="LOC139839465"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685631.1"
                     /db_xref="GeneID:139839465"
                     /translation="MQLMSNDNPREGGSSEEAEPILNESKNAAAAAERGDNHSSSSSS
                     SSSSTFEIRRVASSDCLIAVEEDSHDGSDNDDVNENSSLVTSDQSQCRICLDTEDLIA
                     PCHCRGTQKYVHRSCLDNWRSTREGFAFSHCTECRAVFILRANVPPDRWWLRLKFQLL
                     VARDHAFIFVIVQLIVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLL
                     YGFFIAIICGQRINERHYHILAKQELTKEYIVEDREVNKDAAELDPSHVTELRMLGLY
                     "
     misc_feature    489..629
                     /gene="LOC139839465"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); Region:
                     RING_CH-C4HC3_MARCH; cd16495"
                     /db_xref="CDD:438158"
ORIGIN      
        1 aagcgagatt ctaatttgct atcgttaagt ccctattcaa atcgagttat ttttggagat
       61 ctcctttgga cagatcttca ttgaccggcc gatactttgt tcagacttag ggttcattat
      121 cccccgaatt tatataaatt tgctttttgt gttgaaatgg taaattggag aaacttgttt
      181 gtaagttgtg gttggatcca gattgtacgt gtctcaagat gcaactaatg tcaaatgaca
      241 atccaagaga aggcggctct tcagaagaag cagaacccat cttaaatgag tctaaaaatg
      301 ctgctgctgc tgctgagaga ggtgacaacc attcatcatc atcatcatca tcatcatcat
      361 ctacatttga aataagacgt gtagctagca gcgattgttt gatagctgta gaagaagatt
      421 cacatgatgg ttctgataat gatgacgtta atgaaaattc tagtctggta acttctgacc
      481 aatcacagtg ccgcatatgc cttgatacgg aagatttgat tgcgccatgc cattgtagag
      541 gcacccagaa atatgtccat aggtcttgtc ttgataattg gaggtcaacc agggaaggtt
      601 ttgctttctc tcactgcacg gaatgtaggg cagtgtttat actacgagca aatgtcccac
      661 ctgatcgctg gtggttgagg ttaaaatttc agttgctggt tgcaagagat catgcattca
      721 ttttcgtcat tgttcaactg attgttgcat tcttaggtgt cttggtctat aagttttatg
      781 gagatgaact tagagaaatg tttggatatg aagagcaccc ttatggcttt tatacgatgg
      841 ctgtcttagc aatcgttttg gtgggcttgc tctatggttt ctttatagcc ataatttgtg
      901 gacagcgaat caatgaacgc cactatcaca tccttgcaaa acaagaactg acaaaggaat
      961 acattgtcga agacagagaa gtcaacaagg atgctgccga acttgaccct agccatgtta
     1021 cagagctaag aatgttgggt ctctactgag ttatcaattc gcagatgatt ttggatactt
     1081 gttgaaactt agatactggt gtgggctggc attcaggatt gaagacccca ggtcaccccc
     1141 tttgaagctg ttgttaatgt agttgcatta agagtatata cattgagaga gcatatggaa
     1201 attgaattga agttgtatat tgttcttcta tattgtgtta tagttttaat tttcacacgt
     1261 acagatgatc aattcatccc tttatgtgtg tttggtgccc caaacacatt tgtttttttt
     1321 tttttttttt tttttttgta cggcaagtgt agtctttcaa ggattaactg cagacttgta
     1381 ccatttgttt aaacgataag taacttgtgt tgaatgtttt aaacatgcac aatttgatac
     1441 caattgtgta tattgcat
//
LOCUS       XM_071829531            1218 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839466), mRNA.
ACCESSION   XM_071829531
VERSION     XM_071829531.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1218
                     /gene="LOC139839466"
                     /note="uncharacterized LOC139839466; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139839466"
     CDS             1..1218
                     /gene="LOC139839466"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685632.1"
                     /db_xref="GeneID:139839466"
                     /translation="METNSRRTICLDILTEQSVISCSNLGWSGKQTYKDIVENGYNSS
                     KILSQLVVSVVSASCKRNDIIRDAQKHRLEEEIASGEIETGTGKNQVRSLVRAGDTRW
                     GSHHKTMLSLKKLFTEVVNVLQYVKEKGDNALSRRQASGLTNVLSQALQRNDQNILEA
                     VSLVQGTRISLQNFRENGFDGLLKEVNAFCQKYGLEMLNMDEVYVVSRNRKTNITNQH
                     YFKVNIFNTVLDMIILEFGDRFSEVSTELLTNMAALSPRNSFYMFDASKLMKLSEMYP
                     MNFNQTERDHLKRELDVYYEIVRRDDRFLNLKGLADLARLMVDTEKHISFHYVYRLLK
                     LALVLPVATATVERCFSTMKLVKSDLRNRMNDEYLNGCLLGAIEREALTSVTDEAVMD
                     RFQRMKSRRGQLC"
     misc_feature    <961..1140
                     /gene="LOC139839466"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggaaacaa attcaaggag aaccatctgc ttggacattt tgaccgagca atcagtcata
       61 tcttgctcaa atcttgggtg gtcagggaag caaacataca aagatatagt cgaaaacggg
      121 tataactcgt caaaaatctt atcgcaattg gtggtaagcg tggtttctgc ttcgtgtaaa
      181 cgaaatgata ttatccgaga tgctcagaaa catagattag aagaagaaat tgctagtggt
      241 gaaattgaga caggaacagg gaaaaatcaa gtacgttctc ttgtaagagc gggagataca
      301 agatggggtt ctcatcacaa aacaatgtta agtttgaaaa agttgtttac agaagttgtt
      361 aacgttcttc aatatgttaa agaaaaaggt gataatgctt taagtcggcg tcaggcatcc
      421 ggtcttacaa atgtattgtc acaagctctt caaagaaatg atcaaaatat cctagaagcg
      481 gtttcgttgg tgcaaggaac gagaatttca ctgcaaaact ttagagagaa tgggtttgat
      541 gggttattga aggaagtaaa tgcattttgt caaaagtatg gtcttgaaat gttgaacatg
      601 gatgaagtat atgttgtttc aagaaatcga aagacgaata ttaccaatca acattacttc
      661 aaggttaaca tttttaatac agttctggat atgataattc tagaatttgg tgatcgcttt
      721 agtgaggtaa gcaccgaatt gcttactaat atggcggctt taagcccgcg taattcgttt
      781 tatatgtttg atgcatctaa gttaatgaag ttgagtgaga tgtatcctat gaattttaat
      841 caaacagaaa gggatcatct aaagcgtgaa cttgatgtat actatgagat tgtgcgtcga
      901 gatgatagat ttttgaactt aaaagggctt gccgaccttg ctagattgat ggttgacact
      961 gaaaaacata tttcatttca ctatgtctat cggttattaa aacttgcttt agttttaccc
     1021 gttgcaactg caacggtcga gaggtgtttt tcaacaatga agcttgtgaa atcagatttg
     1081 cgtaatcgaa tgaatgatga atatttgaac gggtgtcttc ttggtgccat agaaagagaa
     1141 gcacttacta gtgttacaga tgaagcagtt atggatcgtt tccaacggat gaaatctcgt
     1201 aggggacaat tgtgttaa
//
LOCUS       XR_011756965             401 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839467), ncRNA.
ACCESSION   XR_011756965
VERSION     XR_011756965.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..401
                     /gene="LOC139839467"
                     /note="uncharacterized LOC139839467; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839467"
     ncRNA           1..401
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839467"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839467"
ORIGIN      
        1 aacacatgaa cacatattga ggttaattat ggatatcaag aattgcatca ttactacttt
       61 cattctcttc ctcctacttg tggtactccc tagttcttct tccaaaggaa gactagattc
      121 aaaaatttat gatattgatt accggggacc tgaaactcat tctcaaaggc ctccgcccaa
      181 ccgtggaaat actaatggtg ttcctcacac acatttgaag aaacatcatc cccggtttaa
      241 gaggcaaaca actcgaaata tgatattgaa ggcaaaaaaa acttgatggg taaattgaag
      301 attgttcaag cagaattgtg gcttgagtac aaactcaggt taaaatatac agcgttttgt
      361 gtttgttata aattacggag taatcttttt tccctgtgat a
//
LOCUS       XM_071829532            1560 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein 6-like (LOC139839468), mRNA.
ACCESSION   XM_071829532
VERSION     XM_071829532.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1560
                     /gene="LOC139839468"
                     /note="polyadenylate-binding protein 6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139839468"
     CDS             1..1560
                     /gene="LOC139839468"
                     /codon_start=1
                     /product="polyadenylate-binding protein 6-like"
                     /protein_id="XP_071685633.1"
                     /db_xref="GeneID:139839468"
                     /translation="MAIAMQSVFPIPTPPAQLFLPPALLPATLYVGDLHSDTTENDLY
                     TLFSKIGPLSSVRICRDRVSYKSLCYGYVNFKLTAHADAALSKLNHTEMRGKPMRIMW
                     CQRDPFTRRTGLANLFVKNIDSLVTDVKLEEAFAKFGTILSCKIAKDNQGKSKGFGFV
                     QFDSEESANNALNALDGSTLGEKIISVAKFLKKSERKEPEFTNLYVKNLDSDFTEDLL
                     KDKFSEYGNVTSAVIMKDADGKSKGFGFVNFDSPDSAKMAIEALNGAIIGFKEWFVGK
                     ALKKSEREGLKLSTKTDKISAANLFVRNLAASVDEKALEETFGVFGKIVLTKVVRDKS
                     GASKGFGFVCFSNSEAAKNACDSLNGKLYHQKYMIITAAMSKEECTRHLQARIASQQN
                     FGSSQYLPPYYGLQSYGRTPVYDPYWPPNVYTSMQVLPTYKSPSHQGGVHLSYNKVQK
                     PVKGLNACFSKGLFAKQAYQNLSVKRSRVLLEIKSPKVMKSRKAFLKKHVKNEVGADE
                     GGLGLHQHLAF"
     misc_feature    79..>1278
                     /gene="LOC139839468"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; Region: PABP-1234; TIGR01628"
                     /db_xref="CDD:130689"
ORIGIN      
        1 atggcaattg caatgcagag tgtttttccg atccccacac caccggcaca actgtttcta
       61 ccaccagcac tactaccggc gactctctac gtcggcgatc ttcattctga tactaccgag
      121 aacgatctgt atactctgtt ctccaagatt ggaccactga gttctgttcg tatttgtcga
      181 gatcgtgttt cgtataaatc gctgtgttac ggttacgtca attttaagct cactgctcac
      241 gcggatgcag cgttatcgaa gttgaatcat actgaaatga gggggaaacc gatgcgtata
      301 atgtggtgtc aacgtgatcc gtttacaaga agaactggac tagcaaattt gtttgtgaaa
      361 aacattgatt cattggtgac tgatgttaaa ttggaagagg cttttgcgaa gttcgggacg
      421 attctttctt gtaagattgc taaagataat cagggcaaaa gtaagggttt cggatttgtt
      481 caatttgatt cagaggaatc tgctaataat gctcttaacg cattagatgg atctacactc
      541 ggtgaaaaga ttatttctgt agccaagttt ctcaagaaaa gtgaaaggaa ggaacccgaa
      601 tttacaaatc tgtatgtgaa aaatctcgat tctgatttca ccgaggatct cttgaaagac
      661 aagttctctg aatatggtaa tgtcacaagt gcggtgatca tgaaagatgc tgatgggaaa
      721 tcaaaaggtt ttggattcgt caactttgac tcacctgata gtgcaaagat ggccattgaa
      781 gctctaaatg gtgctataat aggtttcaag gaatggtttg ttggaaaggc tctgaaaaaa
      841 tccgaaagag aaggactgaa actttctact aaaacggaca aaataagtgc tgcgaatctt
      901 tttgtgagga atcttgctgc gtctgtagat gaaaaagctc ttgaggaaac ttttggtgtt
      961 tttgggaaaa tcgttctaac caaagttgta cgcgataaaa gtggtgctag caaagggttt
     1021 ggatttgtgt gtttctccaa ttcagaagca gcaaagaacg cgtgtgattc acttaatgga
     1081 aaactttacc atcaaaagta catgataatt actgctgcaa tgagtaaaga agaatgtacc
     1141 cgacacttgc aagctcgtat tgcatcacaa cagaattttg gtagcagtca gtatctacca
     1201 ccatactatg gtctgcagtc ctatggtaga acacctgtgt atgatcctta ctggccgcca
     1261 aatgtctata caagtatgca agttttacct acttataagt caccgagtca tcagggaggt
     1321 gttcacttga gctataacaa ggttcaaaaa ccagttaagg ggttgaatgc ttgtttctca
     1381 aaggggttgt ttgccaagca ggcttatcag aatctgagtg tgaagaggtc tcgagtgctg
     1441 ttggagatta aatcacctaa agtaatgaaa tcccgaaaag cgtttttgaa gaagcatgtt
     1501 aagaatgaag ttggagcaga tgaaggtggg cttggtttac accagcacct ggctttctga
//
LOCUS       XM_071829533            2733 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839469), transcript variant X1, mRNA.
ACCESSION   XM_071829533
VERSION     XM_071829533.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2733
                     /gene="LOC139839469"
                     /note="uncharacterized LOC139839469; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839469"
     CDS             371..2353
                     /gene="LOC139839469"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685634.1"
                     /db_xref="GeneID:139839469"
                     /translation="MAVADRDSRGSLFNLTFGPNRHLDRKYIVFGKLVEGVEVLKKIE
                     NAGDEDGRPTVTVKIKYCGELGESENQSSDKKVSSKKMGKDVSSEVHSHEMRKKGKHK
                     KSSKDRRKKRKRYSSSESDSSSDTESDESDSDSDSDSDLSDSSSSSSDVSSSSDDRRK
                     RKKRASRKDRHRRKRRDKRREKKRRKRDKKSKHRSKRTTVNVSEDASESGSEDNGDVR
                     KPNRKHNNSVKITDGNHSPSAEVEDGSLGHKNGGAYVTDERKEGEYPKENGNRPSNGN
                     DLAKVSEIPDVVDDHPHNSRSRSKSPQRALSKSMSMSISPRRSLSVSPRRNLSRSPSV
                     STSPRRPTQLKNRSISRSRSPIRSFSRSPVRGKKVRSISRSPIASRARISVSRSPTPS
                     PPRTSLRKSVSRSPVRSSRRSPVRSSGRIPLRRSPSRSSGRVPLRRSLSRSPVRAPLR
                     GSRRSYSRSPVGGRRGRSRSPLGDRGRSLSRSGSSDGSPKRIRRGRGFSNRYSYARRY
                     HSPDRSPVRSYRYGRSDCDRYPSYRRRSPMRDRSPPRYRARRSRTRSPSVSRSPVRFR
                     RHYSRSRSPVETSRYRSSPPVERRRAPRSRTPPSRSRSPYETRASSPSPPPRRTSKSK
                     SKSNSKSKSLSRSRSRSWSGSPPPKKGLVSYGDGSP"
     misc_feature    <371..547
                     /gene="LOC139839469"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerases. This family contains eukaryotic, bacterial and
                     archeal proteins which exhibit a peptidylprolyl cis- trans
                     isomerases activity (PPIase, Rotamase) and in addition
                     bind the immunosuppressive drug...; Region: cyclophilin;
                     cl00197"
                     /db_xref="CDD:469651"
     misc_feature    1232..>2221
                     /gene="LOC139839469"
                     /note="transcriptional regulator ICP4; Provisional;
                     Region: PHA03307"
                     /db_xref="CDD:223039"
     polyA_site      2733
                     /gene="LOC139839469"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgttcccaag actgctgaga attttcgcgc attctgtact ggagaaaaag ggaatagtca
       61 gaaaactgga aagcctctac actacaaggg gtccttcttt caccgcatag tcaaaggatc
      121 catggctcag gatacagggt tgatggtcac aactgctttt cttgtgatgt agttttaagg
      181 gtggggattt tcataaacgt gatggtagtt acggagagag catatacggt gggaagtttc
      241 caggttgtgg ctgacattgg tcgtattctc gctgcatggg agctcgaccc acaatgaaat
      301 cagacaattt taattgtctt gaaatgatga atcttccaag ctaaaacatg attcacccgg
      361 ccttctaaca atggcagttg cagatcgtga ttcacgtggt tctctgttta acttgacctt
      421 tggtcctaat cggcatcttg ataggaaata tattgttttt ggaaagcttg tggaaggggt
      481 tgaggtatta aaaaagattg aaaatgcggg tgatgaagac ggaagaccta ctgtaactgt
      541 gaagatcaaa tattgtggtg aattaggcga aagcgagaat cagagttctg ataagaaagt
      601 atcaagtaag aaaatgggca aagatgtttc ttcagaggtt catagccatg aaatgcggaa
      661 aaagggaaag cacaaaaaat cctcaaaaga tcgaaggaag aagagaaaaa gatattcatc
      721 aagtgaatca gatagttctt cagacacgga gtcagacgaa tctgactcag atagtgattc
      781 tgattcagac ctatctgatt catcatcatc ttcatctgat gtcagttctt caagtgatga
      841 tagacgtaag agaaagaaga gagcatctag aaaagatcgg cacaggcgta aacggagaga
      901 caagagacgt gagaagaagc gcaggaagcg tgataagaag tctaaacacc gatcaaaaag
      961 gacgactgtt aatgtcagcg aggatgcgag tgaaagtgga tctgaagata acggtgatgt
     1021 cagaaagcct aatcgaaaac ataataattc ggtgaagatc actgatggaa atcactctcc
     1081 ttcagctgaa gttgaagatg gttctcttgg tcataaaaac ggaggtgcat atgttacaga
     1141 tgaaaggaag gaaggtgaat atcctaagga aaatggtaac aggccgagca acggtaatga
     1201 tttggcgaag gtttctgaga tacccgatgt tgtagatgac catccacaca attccagaag
     1261 caggagcaaa agtcctcaaa gggccctgag caagagcatg agcatgagca ttagtcctag
     1321 gaggagcctt agtgtgagcc ccaggcgcaa tttaagcagg agcccgagtg tcagtacgtc
     1381 tcctaggcgt cccactcaac tcaaaaatcg tagtattagc cgaagccgaa gcccaattag
     1441 aagcttcagc agaagtcctg tgaggggcaa aaaagtaaga agcataagcc gaagcccgat
     1501 agcgtcacga gctcgtatca gtgttagcag gagccccaca ccgtcaccgc ctcgaacatc
     1561 attaagaaag tcggttagca gaagtcctgt tagatcttct agaagaagtc ctgtgagaag
     1621 ctcgggccgg atcccgttga ggaggagtcc gagtcgaagc tcgggtcgag tcccgttgag
     1681 gaggagtcta agcaggagtc ctgttagagc acctttgagg ggtagtcgtc gcagttattc
     1741 aaggagtcct gttggtggtc gtaggggtag gtcccggtcc cctttaggtg accgtggaag
     1801 gagcttatct cgaagtggtt cgtctgatgg atcacctaag cgtattagaa gaggaagggg
     1861 ttttagtaac cgatattctt atgcacgtag atatcattcc cctgatcgtt ctccagttcg
     1921 atcttatcgg tatggcagga gtgactgtga caggtacccg agctacaggc gtcgcagccc
     1981 aatgagagac agaagtccac caaggtacag agctagaaga agtaggacgc gtagtccaag
     2041 tgtatcacga agccctgttc gctttcgtcg ccattacagt cgcagccgct ctccagtgga
     2101 gacttctcga tacaggtcat caccaccggt tgaaagacga agggcgcctc gtagtagaac
     2161 tccaccgtct cgaagcagga gcccctatga aacaagagct tcttcaccct caccaccacc
     2221 tagaaggacc agcaagtcaa agtcaaagtc aaattcaaag tcaaaatccc tctcaaggtc
     2281 aaggtctaga tcgtggtctg gaagccctcc tcctaagaaa ggactcgtct cttatggaga
     2341 tggttctcct tgactctggt caaaagtgag aaattgatgt ttgatgagat gtgtttaggt
     2401 tgaggaattc acattttctg tgctatttgg atgcatttgg aaggggcgtc gaatatgtat
     2461 tggtgtgttt taataaattg agaatcatct ttgtttttgt ttccttgtgt ttcctgtcta
     2521 tgaaagtgtt agacttgtta agacgatttg gacttgtttt caggagttta gacccatgga
     2581 gaggattatg attttaaagc gtctgatatt aactcaattg tcatgggatt atgttattta
     2641 agctactatt gttatggcta tcaggctatg gcatattagc tttatattgt gctattagca
     2701 tgttggatat tgaggcatgt ccatcagata tta
//
LOCUS       XM_071829534            2779 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839469), transcript variant X2, mRNA.
ACCESSION   XM_071829534
VERSION     XM_071829534.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2779
                     /gene="LOC139839469"
                     /note="uncharacterized LOC139839469; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839469"
     CDS             90..2399
                     /gene="LOC139839469"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685635.1"
                     /db_xref="GeneID:139839469"
                     /translation="MSKKNPFVYLDVSIDGDPFERMVFELFSDIVPKTAENFRAFCTG
                     EKGNSQKTGKPLHYKGSFFHRIVKGSMAQGGDFHKRDGSYGESIYGGKFPDESSKLKH
                     DSPGLLTMAVADRDSRGSLFNLTFGPNRHLDRKYIVFGKLVEGVEVLKKIENAGDEDG
                     RPTVTVKIKYCGELGESENQSSDKKVSSKKMGKDVSSEVHSHEMRKKGKHKKSSKDRR
                     KKRKRYSSSESDSSSDTESDESDSDSDSDSDLSDSSSSSSDVSSSSDDRRKRKKRASR
                     KDRHRRKRRDKRREKKRRKRDKKSKHRSKRTTVNVSEDASESGSEDNGDVRKPNRKHN
                     NSVKITDGNHSPSAEVEDGSLGHKNGGAYVTDERKEGEYPKENGNRPSNGNDLAKVSE
                     IPDVVDDHPHNSRSRSKSPQRALSKSMSMSISPRRSLSVSPRRNLSRSPSVSTSPRRP
                     TQLKNRSISRSRSPIRSFSRSPVRGKKVRSISRSPIASRARISVSRSPTPSPPRTSLR
                     KSVSRSPVRSSRRSPVRSSGRIPLRRSPSRSSGRVPLRRSLSRSPVRAPLRGSRRSYS
                     RSPVGGRRGRSRSPLGDRGRSLSRSGSSDGSPKRIRRGRGFSNRYSYARRYHSPDRSP
                     VRSYRYGRSDCDRYPSYRRRSPMRDRSPPRYRARRSRTRSPSVSRSPVRFRRHYSRSR
                     SPVETSRYRSSPPVERRRAPRSRTPPSRSRSPYETRASSPSPPPRRTSKSKSKSNSKS
                     KSLSRSRSRSWSGSPPPKKGLVSYGDGSP"
     misc_feature    105..605
                     /gene="LOC139839469"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerases. This family contains eukaryotic, bacterial and
                     archeal proteins which exhibit a peptidylprolyl cis- trans
                     isomerases activity (PPIase, Rotamase) and in addition
                     bind the immunosuppressive drug...; Region: cyclophilin;
                     cl00197"
                     /db_xref="CDD:469651"
     misc_feature    order(282..284,288..290,297..302,306..308,420..425,
                     450..452,456..458,480..485,495..497)
                     /gene="LOC139839469"
                     /note="active site"
                     /db_xref="CDD:238194"
     misc_feature    1278..>2267
                     /gene="LOC139839469"
                     /note="transcriptional regulator ICP4; Provisional;
                     Region: PHA03307"
                     /db_xref="CDD:223039"
     polyA_site      2779
                     /gene="LOC139839469"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accaagtaca ctttttctct ctatatatgt gatgcacaga ctaagtgctc gtggaatgct
       61 ggattgacag gtttccagat acaagaaaaa tgagcaagaa gaacccgttt gtatacttgg
      121 acgtgtctat agatggagat ccttttgaaa gaatggtttt tgagctcttc tcggatattg
      181 ttcccaagac tgctgagaat tttcgcgcat tctgtactgg agaaaaaggg aatagtcaga
      241 aaactggaaa gcctctacac tacaaggggt ccttctttca ccgcatagtc aaaggatcca
      301 tggctcaggg tggggatttt cataaacgtg atggtagtta cggagagagc atatacggtg
      361 ggaagtttcc agatgaatct tccaagctaa aacatgattc acccggcctt ctaacaatgg
      421 cagttgcaga tcgtgattca cgtggttctc tgtttaactt gacctttggt cctaatcggc
      481 atcttgatag gaaatatatt gtttttggaa agcttgtgga aggggttgag gtattaaaaa
      541 agattgaaaa tgcgggtgat gaagacggaa gacctactgt aactgtgaag atcaaatatt
      601 gtggtgaatt aggcgaaagc gagaatcaga gttctgataa gaaagtatca agtaagaaaa
      661 tgggcaaaga tgtttcttca gaggttcata gccatgaaat gcggaaaaag ggaaagcaca
      721 aaaaatcctc aaaagatcga aggaagaaga gaaaaagata ttcatcaagt gaatcagata
      781 gttcttcaga cacggagtca gacgaatctg actcagatag tgattctgat tcagacctat
      841 ctgattcatc atcatcttca tctgatgtca gttcttcaag tgatgataga cgtaagagaa
      901 agaagagagc atctagaaaa gatcggcaca ggcgtaaacg gagagacaag agacgtgaga
      961 agaagcgcag gaagcgtgat aagaagtcta aacaccgatc aaaaaggacg actgttaatg
     1021 tcagcgagga tgcgagtgaa agtggatctg aagataacgg tgatgtcaga aagcctaatc
     1081 gaaaacataa taattcggtg aagatcactg atggaaatca ctctccttca gctgaagttg
     1141 aagatggttc tcttggtcat aaaaacggag gtgcatatgt tacagatgaa aggaaggaag
     1201 gtgaatatcc taaggaaaat ggtaacaggc cgagcaacgg taatgatttg gcgaaggttt
     1261 ctgagatacc cgatgttgta gatgaccatc cacacaattc cagaagcagg agcaaaagtc
     1321 ctcaaagggc cctgagcaag agcatgagca tgagcattag tcctaggagg agccttagtg
     1381 tgagccccag gcgcaattta agcaggagcc cgagtgtcag tacgtctcct aggcgtccca
     1441 ctcaactcaa aaatcgtagt attagccgaa gccgaagccc aattagaagc ttcagcagaa
     1501 gtcctgtgag gggcaaaaaa gtaagaagca taagccgaag cccgatagcg tcacgagctc
     1561 gtatcagtgt tagcaggagc cccacaccgt caccgcctcg aacatcatta agaaagtcgg
     1621 ttagcagaag tcctgttaga tcttctagaa gaagtcctgt gagaagctcg ggccggatcc
     1681 cgttgaggag gagtccgagt cgaagctcgg gtcgagtccc gttgaggagg agtctaagca
     1741 ggagtcctgt tagagcacct ttgaggggta gtcgtcgcag ttattcaagg agtcctgttg
     1801 gtggtcgtag gggtaggtcc cggtcccctt taggtgaccg tggaaggagc ttatctcgaa
     1861 gtggttcgtc tgatggatca cctaagcgta ttagaagagg aaggggtttt agtaaccgat
     1921 attcttatgc acgtagatat cattcccctg atcgttctcc agttcgatct tatcggtatg
     1981 gcaggagtga ctgtgacagg tacccgagct acaggcgtcg cagcccaatg agagacagaa
     2041 gtccaccaag gtacagagct agaagaagta ggacgcgtag tccaagtgta tcacgaagcc
     2101 ctgttcgctt tcgtcgccat tacagtcgca gccgctctcc agtggagact tctcgataca
     2161 ggtcatcacc accggttgaa agacgaaggg cgcctcgtag tagaactcca ccgtctcgaa
     2221 gcaggagccc ctatgaaaca agagcttctt caccctcacc accacctaga aggaccagca
     2281 agtcaaagtc aaagtcaaat tcaaagtcaa aatccctctc aaggtcaagg tctagatcgt
     2341 ggtctggaag ccctcctcct aagaaaggac tcgtctctta tggagatggt tctccttgac
     2401 tctggtcaaa agtgagaaat tgatgtttga tgagatgtgt ttaggttgag gaattcacat
     2461 tttctgtgct atttggatgc atttggaagg ggcgtcgaat atgtattggt gtgttttaat
     2521 aaattgagaa tcatctttgt ttttgtttcc ttgtgtttcc tgtctatgaa agtgttagac
     2581 ttgttaagac gatttggact tgttttcagg agtttagacc catggagagg attatgattt
     2641 taaagcgtct gatattaact caattgtcat gggattatgt tatttaagct actattgtta
     2701 tggctatcag gctatggcat attagcttta tattgtgcta ttagcatgtt ggatattgag
     2761 gcatgtccat cagatatta
//
LOCUS       XM_071829535            4040 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phytochrome B-like
            (LOC139839470), mRNA.
ACCESSION   XM_071829535
VERSION     XM_071829535.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4040
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4040
                     /gene="LOC139839470"
                     /note="phytochrome B-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139839470"
     CDS             262..3723
                     /gene="LOC139839470"
                     /codon_start=1
                     /product="phytochrome B-like"
                     /protein_id="XP_071685636.1"
                     /db_xref="GeneID:139839470"
                     /translation="MASGSRASSRVHPQQNPPLSSTPSTSMVNNNNNNNNNSKSTHTH
                     THNHNNNNNNRVVDSMSKAIAQYALDARLHAVYEQSGESGRSFNYSHSIKTTATDSIA
                     EQQMTAYLSKIQRGGHIQPFGCMIAIDSSSFRVIAFSENARERLGFAPQSVPSLERPE
                     ILTIGTDVSTLFTPSSTVLLERAFRAREISLLNPVWVHSKNSGKPFYAILHRIDVGIV
                     IDLEPARTEDPALSIAGAVQSQKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYD
                     RVMVYKFHEDEHGEVVAESKRADLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCYA
                     SPVQVIQDEALMQPLCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDGAGGR
                     GTMGLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNLELQLASQMSEKRILRTQT
                     LLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYFPLGITPTESQIKDIVGWLL
                     ACHTDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGG
                     AKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDSEE
                     NNSKAMIKVQIEEMGLQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKIAE
                     LTGLSVTEAMGKSLVQDLIFKESEEIVSRLLYNALQGEEDKNVEIKLRTFSSAQQEDA
                     IFVVVNACSSKDYTDNIVGVCFVGQDVTGQKVVMDKFVQIQGDYKAIIHSPNALIPPI
                     FASDENTCCSEWNTAMEKLTGWARDDVIGKMLVGEIFGSCCRLKGPDSLTKLMIILHN
                     AIGGQDTDKYPFSFFDKRGKYVQALLTANKRVNLGGEITGAFCFLQIASPELQQALKI
                     QRQQENKCFERMKELAYICHEIKNPLSGIRFANSLLEATGLTEDQKQLLETSAACEKQ
                     MLKIIKDVDMENIQEGHLELEKQDFLLGNVIDAVVSQAMLNLKERGVQLIRDIPEEVK
                     TLTVYGDQTRVQQVLSNFLLNMVRHSPSPNGWVEIQVRPTMKQIFDGMTNVHIEFRMV
                     CPGDGLPPELVQDMFHSSQWSTDEGLGLSMCRKILKLMNGDVQYIRESERCYFQIALE
                     LPLHNRT"
     misc_feature    583..933
                     /gene="LOC139839470"
                     /note="PAS fold; Region: PAS_2; pfam08446"
                     /db_xref="CDD:400652"
     misc_feature    1030..1572
                     /gene="LOC139839470"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; Region: GAF; smart00065"
                     /db_xref="CDD:214500"
     misc_feature    1594..2118
                     /gene="LOC139839470"
                     /note="Phytochrome region; Region: PHY; pfam00360"
                     /db_xref="CDD:425635"
     misc_feature    2212..2562
                     /gene="LOC139839470"
                     /note="PAS fold; Region: PAS; pfam00989"
                     /db_xref="CDD:395786"
     misc_feature    2605..2967
                     /gene="LOC139839470"
                     /note="PAS fold; Region: PAS; pfam00989"
                     /db_xref="CDD:395786"
     misc_feature    2980..3714
                     /gene="LOC139839470"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; Region: KdpD; COG2205"
                     /db_xref="CDD:441807"
     misc_feature    3364..3702
                     /gene="LOC139839470"
                     /note="Histidine kinase-like ATPase domain of plant
                     phytochromes similar to Arabidopsis thaliana Phytochrome
                     A, B, C, D and E; Region: HATPase_Phy-like; cd16932"
                     /db_xref="CDD:340409"
     misc_feature    order(3400..3402,3412..3414,3421..3423,3520..3522,
                     3526..3528,3532..3534,3538..3543,3598..3609,3655..3657,
                     3661..3663,3673..3678,3682..3684)
                     /gene="LOC139839470"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340409"
     misc_feature    order(3559..3561,3607..3609)
                     /gene="LOC139839470"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340409"
     polyA_site      4040
                     /gene="LOC139839470"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgagatgtga gagaaagatg ggatgaggga gaatccatga ctgtgtaatg gcaatctcaa
       61 accaccttca aaaatcaaac aaaatcaaac caaagaaagc aaccatattt taacatccac
      121 cacaaattgc aatccttctt taaccctcat catcatcatc atcaataact taaacctttt
      181 cttgttgatg ttattactta tcatcataac agacaagttg taatatttat cctccaatta
      241 gggcttcaag attcagttaa catggcttct ggaagcagag caagttccag ggttcatccc
      301 caacaaaacc cacctctatc atcaacacct tcaacaagta tggtaaacaa taacaataat
      361 aacaataaca atagtaagag tactcatact catactcata atcataataa caataacaat
      421 aatagagtgg ttgattcaat gagtaaagca attgcacaat atgcacttga tgcaagatta
      481 catgctgttt atgaacaatc tggtgaatct ggtaggtctt ttaattattc acactccatc
      541 aaaacaacag caactgattc aattgctgaa caacaaatga ctgcttattt atccaaaatt
      601 caaagaggtg gtcacattca accttttggt tgtatgattg ctattgatag ttctagcttt
      661 agagttattg cttttagtga aaatgctaga gaaagattag gttttgctcc acaatctgtt
      721 cctagtctcg aaagacccga aatcttgact attgggactg atgtcagcac ccttttcacc
      781 ccttcaagta ctgtcttgct ggaacgggct tttcgagccc gggaaatttc actgctgaac
      841 cctgtctggg ttcattctaa gaattcgggt aaaccctttt acgcaatctt gcataggatc
      901 gatgtgggta tagtaatcga tctggaacct gctagaactg aggaccctgc tttgtcaatt
      961 gctggggccg ttcagtcaca aaagctcgct gtccgggcta tttcaaattt acaagcttta
     1021 cccggaggtg atattaagct tttgtgcgat actgttgtgc aaaatgtgag agagcttacg
     1081 ggttatgatc gggtcatggt gtataagttt catgaagacg agcatggtga agttgtggct
     1141 gagagcaagc gggctgattt ggatccttac atcgggttgc attatcctgc gactgatatt
     1201 ccacaagctt caagattctt gttcaggcag aatcgtgtga ggatgattgt ggattgttat
     1261 gcttcccctg ttcaggttat ccaagacgaa gctttgatgc agcctttgtg tttagtcggt
     1321 tcgacccttc gagcccctca tgggtgccat tcacaataca tggcgaacat gggttcgata
     1381 gcttcattag ccatggccgt tattataaac ggaaatgagg atggtgcggg aggaagaggt
     1441 acgatggggt tatggggatt agttgtttgt catcatacgt cggcacgatg cattcctttt
     1501 cctctacgtt acgcgtgtga attcttaatg caagcgtttg gactccaatt aaacttggag
     1561 ttacaactgg cttcacaaat gtcggaaaaa cgaattctga gaacacaaac tttgttatgt
     1621 gatatgcttc ttcgggattc acctactggt atagtgactc aaagtccaag cattatggac
     1681 ctcgtgaaat gtgacggggc agcactttac tatcaaggaa agtattttcc gttgggcatc
     1741 acgccaaccg aatcacaaat caaagacatt gttgggtggt tattagcttg tcacacggat
     1801 tcaactggct taagcaccga tagtttagct gatgcaggtt atcctggtgc tgcgtcactg
     1861 ggtgatgcgg tttgcgggat ggcggttgct tacattacgt ctaaagattt cttgttttgg
     1921 tttagatctc atactgcaaa agagatcaaa tggggtggag ctaaacatca tccggaagat
     1981 aaagatgacg ggcaaagaat gcatccgcgt tcatcattca atgcgttttt ggaagttgtt
     2041 aaaagtagaa gtttgccgtg ggagaacgcg gaaatggatg cgatacattc tttacagctt
     2101 atattaagag attcgtttaa agattctgaa gaaaacaatt cgaaagctat gattaaggtt
     2161 caaattgaag aaatggggtt gcaggggatg gatgaactca gttcagttgc aagagagatg
     2221 gttagattaa ttgaaaccgc aactgcacct atatttgctg tagatgttga aggtcgaata
     2281 aatggatgga atgcaaagat tgcagaatta acaggtttat cggttacaga agctatggga
     2341 aagtcattgg ttcaagatct gatttttaaa gaatctgaag aaattgtttc caggctttta
     2401 tataatgctt tacaaggtga agaagataag aatgtggaaa tcaaactaag gacattcagt
     2461 tcggcacaac aagaagatgc tatttttgtg gttgttaatg cttgttcaag caaggactat
     2521 acagataaca ttgttggagt ttgttttgtt ggtcaagatg ttactggaca aaaagttgta
     2581 atggacaaat ttgtccaaat tcaaggtgat tacaaggcca ttattcatag tcccaacgct
     2641 ctaataccac ctatctttgc atccgatgag aacacgtgtt gctccgagtg gaacaccgca
     2701 atggagaaac tcaccgggtg ggcccgagat gatgtcattg ggaaaatgtt agttggtgag
     2761 atatttggaa gttgttgtcg tcttaagggt cccgattctt tgacaaagtt aatgatcatt
     2821 ttgcataatg caattggagg acaagatacg gataagtacc cgttttcttt ctttgataaa
     2881 cgtgggaaat acgtgcaagc tttgttgacg gcaaacaaac gggttaattt gggcggggag
     2941 attactggag cgttttgttt cttacagatt gcaagccccg agttgcagca agctttgaaa
     3001 atacaacgac aacaggagaa caaatgtttt gagaggatga aagagttggc gtatatctgt
     3061 catgagatta agaatccgtt aagtggcatt cggtttgcta attctctttt ggaagccaca
     3121 ggtttaactg aagatcaaaa gcagttgttg gaaacaagtg ccgcatgcga gaaacagatg
     3181 ttaaagatta taaaagatgt tgatatggag aacattcagg agggccattt ggagctcgaa
     3241 aaacaggact ttctactcgg gaatgtaatt gatgctgtgg ttagccaagc gatgttaaac
     3301 ctcaaggaac gaggcgtgca actaatccgg gatattccgg aagaagtcaa gactttgact
     3361 gtctatggtg accaaacgag ggttcaacaa gttctgtcca atttcttgtt gaatatggtt
     3421 cgtcattcac cctcaccaaa tggttgggtc gaaattcaag tcagacctac catgaagcaa
     3481 atttttgatg gaatgaccaa tgtgcatata gagtttagga tggtgtgccc aggtgacggt
     3541 ctaccacctg agctggttca agacatgttc catagcagtc aatggagcac cgacgaaggt
     3601 ctgggattaa gcatgtgtcg taaaatatta aagcttatga atggagacgt tcaatatatc
     3661 agagaatcgg aacgttgtta tttccaaatc gcacttgaac tccctcttca caatagaacg
     3721 tgagactcga cgcaatatcc ccgagcatga ttagcaacaa agtcactcat gtactattga
     3781 aggacgcatt tctaggcttg ttaaatgatt tcgtgtagat gattcatact tggttttgat
     3841 ggataaaaga atatggctgg caaggtttat aaacgaactg tatcgcctcg atgttggacg
     3901 gtgtattagt tggtagatat gtattttatg ttgttacaaa ctgttacatt gtcattcaag
     3961 tgttgtatct ttgagggtat tgtgactgca caattcatat ataatgtgtt ggaatgatat
     4021 aaataagtta tcaatgtcaa
//
LOCUS       XM_071829536            1836 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent protein
            kinase 29-like (LOC139839472), transcript variant X1, mRNA.
ACCESSION   XM_071829536
VERSION     XM_071829536.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1836
                     /gene="LOC139839472"
                     /note="calcium-dependent protein kinase 29-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139839472"
     CDS             29..1795
                     /gene="LOC139839472"
                     /codon_start=1
                     /product="calcium-dependent protein kinase 29-like isoform
                     X1"
                     /protein_id="XP_071685637.1"
                     /db_xref="GeneID:139839472"
                     /translation="MGICWSFLKPRGSHEIPISSPSPTHHQYLPDDHFVPQERTYYPI
                     STNFNPQKSMKDHENESILGKEYVDVKDTYYIGKELGRGQFGVTYLCTEKATGMKYAC
                     KSISKRKLVTKKDMEDVRREILMLQHLTAQPNIVEFKGAYEDEMSVHLVMELCSGGEL
                     FDRITKKGSYSEKEAAKIGRQIVNVVNVCHFMGVMHRDLKPENFLMVSQDENAPLKAT
                     DFGLSVFIEEGKIYKEIVGSAYYVAPEVLRRRYGKEIDVWSAGIILYILLSGVPPFWG
                     GNSFSITKCIQHCFRLKLNVCRYFLETEKAIFEEILDGKLDLQSPPWPSISLGAKDLI
                     SKMLMRNPKDRITADKALEHPWLKEDGEASELPMDSAVLIRMKQFRAMNKLKKLALKV
                     IAENLESTEEIKGLKQMFNNMDTDKSGSITYEELKTGLSKLGSRLAEPEIQQLMDAAD
                     VDKNGTIDYIEFITATMHRHKLDREENLYRAFQFFDKDNSGFITRDELKHSMTQYGMG
                     DEATIDEVLDDVDTDKDGKINYEEFVTMMRKGTVETVPKRQRLVSCGWFSVFTRRKIP
                     GMLIGWILDLTLMILGSYNQKN"
     misc_feature    248..1096
                     /gene="LOC139839472"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; Region: STKc_CAMK; cd05117"
                     /db_xref="CDD:270687"
     misc_feature    order(266..280,290..292,329..331,335..337,434..436,
                     482..493,503..505,509..511,617..622,626..628,632..637,
                     641..643,680..685,692..694,734..748,752..754)
                     /gene="LOC139839472"
                     /note="active site"
                     /db_xref="CDD:270687"
     misc_feature    order(266..277,290..292,329..331,335..337,434..436,
                     482..493,503..505,632..637,641..643,680..685)
                     /gene="LOC139839472"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(278..280,503..505,509..511,617..622,626..628,
                     632..634,692..694,734..748,752..754)
                     /gene="LOC139839472"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(680..706,734..748)
                     /gene="LOC139839472"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270687"
     misc_feature    1205..1639
                     /gene="LOC139839472"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
ORIGIN      
        1 aacccatttc aaccctcaac aaccttaaat gggtatttgt tggtctttcc taaaaccacg
       61 tggaagccac gaaattccga tttcgtcccc ttcacccact catcatcaat accttcccga
      121 tgatcatttc gtccctcaag aaagaacgta ctatccgata tcaaccaatt tcaacccaca
      181 aaaatccatg aaagatcatg aaaatgaatc tatcttagga aaggagtatg ttgatgttaa
      241 agatacttac tatattggga aagaattagg cagaggacaa tttggtgtca catatctttg
      301 cactgaaaaa gcaactggaa tgaagtatgc atgcaaatca atatcgaaga gaaagcttgt
      361 gaccaagaaa gatatggagg atgtaagaag ggagatattg atgttgcaac atttaacagc
      421 acaaccaaat atagtggagt ttaaaggcgc ttatgaagat gaaatgagtg tgcatttggt
      481 gatggaattg tgtagtggtg gtgaactttt tgataggata actaaaaaag gaagttattc
      541 tgaaaaagaa gcagcaaaga ttgggagaca aattgtgaat gttgtaaatg tttgtcattt
      601 tatgggagtg atgcatagag atttgaaacc tgaaaatttc ttgatggtta gtcaagatga
      661 aaatgctcca ttaaaggcta ctgattttgg tctttcagtt ttcattgaag aaggcaaaat
      721 ttacaaagaa atagtaggaa gtgcatacta tgtggcacca gaggtgttac gacgtcgtta
      781 tgggaaggag atagatgtgt ggagtgctgg tatcattttg tacattcttc ttagtggtgt
      841 ccctcctttt tggggaggta attcattctc tataactaaa tgtatccaac attgttttcg
      901 tcttaaacta aacgtgtgtc gatatttctt agagaccgaa aaggccatat ttgaagaaat
      961 attagatggt aaacttgacc ttcaaagccc tccatggcca tcgatatccc ttggtgctaa
     1021 agatttgatc tctaagatgt tgatgagaaa tcctaaggac cgtatcactg cagacaaggc
     1081 tctcgaacac ccatggctta aagaagacgg tgaagcatca gaactgccta tggatagtgc
     1141 ggttttgatt cgaatgaagc agttcagagc aatgaacaag ttaaaaaagc tcgcattgaa
     1201 ggttattgca gaaaacttag aatcaacaga agagataaag ggcttgaaac aaatgttcaa
     1261 caacatggac acggataaaa gtggttcgat aacatacgaa gaactaaaaa caggactatc
     1321 aaaacttgga tcaaggcttg cagagccaga aatacaacag ctcatggacg ccgctgatgt
     1381 tgacaaaaat ggaacaattg actacatcga gttcatcact gcaacaatgc atcgacacaa
     1441 acttgatagg gaagaaaatt tgtacagagc cttccaattt tttgacaaag ataatagcgg
     1501 gtttatcact agagatgaac tgaaacattc tatgactcaa tacggaatgg gagatgaagc
     1561 aaccattgat gaagtgcttg atgatgtaga tactgataag gatgggaaga tcaactatga
     1621 agagtttgta acaatgatga ggaagggaac agttgaaaca gttccaaaac gacaacgcct
     1681 ggtgtcatgc ggatggtttt cggttttcac tcgaaggaaa attccgggga tgttgatagg
     1741 ttggattctg gatttaacat tgatgatttt gggtagttat aaccagaaaa actaatatgt
     1801 ataactagaa acacttctaa tttcatcaat gaaaag
//
LOCUS       XM_071829537            1761 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent protein
            kinase 29-like (LOC139839472), transcript variant X2, mRNA.
ACCESSION   XM_071829537
VERSION     XM_071829537.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1761
                     /gene="LOC139839472"
                     /note="calcium-dependent protein kinase 29-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 90 Proteins"
                     /db_xref="GeneID:139839472"
     CDS             29..1720
                     /gene="LOC139839472"
                     /codon_start=1
                     /product="calcium-dependent protein kinase 29-like isoform
                     X2"
                     /protein_id="XP_071685638.1"
                     /db_xref="GeneID:139839472"
                     /translation="MGICWSFLKPRGSHEIPISSPSPTHHQYLPDDHFVPQERTYYPI
                     STNFNPQKSMKDHENESILGKEYVDVKDTYYIGKELGRGQFGVTYLCTEKATGMKYAC
                     KSISKRKLVTKKDMEDVRREILMLQHLTAQPNIVEFKGAYEDEMSVHLVMELCSGGEL
                     FDRITKKGSYSEKEAAKIGRQIVNVVNVCHFMGVMHRDLKPENFLMVSQDENAPLKAT
                     DFGLSVFIEEGKIYKEIVGSAYYVAPEVLRRRYGKEIDVWSAGIILYILLSGVPPFWG
                     ETEKAIFEEILDGKLDLQSPPWPSISLGAKDLISKMLMRNPKDRITADKALEHPWLKE
                     DGEASELPMDSAVLIRMKQFRAMNKLKKLALKVIAENLESTEEIKGLKQMFNNMDTDK
                     SGSITYEELKTGLSKLGSRLAEPEIQQLMDAADVDKNGTIDYIEFITATMHRHKLDRE
                     ENLYRAFQFFDKDNSGFITRDELKHSMTQYGMGDEATIDEVLDDVDTDKDGKINYEEF
                     VTMMRKGTVETVPKRQRLVSCGWFSVFTRRKIPGMLIGWILDLTLMILGSYNQKN"
     misc_feature    248..1021
                     /gene="LOC139839472"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; Region: STKc_CAMK; cd05117"
                     /db_xref="CDD:270687"
     misc_feature    order(266..280,290..292,329..331,335..337,434..436,
                     482..493,503..505,509..511,617..622,626..628,632..637,
                     641..643,680..685,692..694,734..748,752..754)
                     /gene="LOC139839472"
                     /note="active site"
                     /db_xref="CDD:270687"
     misc_feature    order(266..277,290..292,329..331,335..337,434..436,
                     482..493,503..505,632..637,641..643,680..685)
                     /gene="LOC139839472"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(278..280,503..505,509..511,617..622,626..628,
                     632..634,692..694,734..748,752..754)
                     /gene="LOC139839472"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(680..706,734..748)
                     /gene="LOC139839472"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270687"
     misc_feature    1130..1564
                     /gene="LOC139839472"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
ORIGIN      
        1 aacccatttc aaccctcaac aaccttaaat gggtatttgt tggtctttcc taaaaccacg
       61 tggaagccac gaaattccga tttcgtcccc ttcacccact catcatcaat accttcccga
      121 tgatcatttc gtccctcaag aaagaacgta ctatccgata tcaaccaatt tcaacccaca
      181 aaaatccatg aaagatcatg aaaatgaatc tatcttagga aaggagtatg ttgatgttaa
      241 agatacttac tatattggga aagaattagg cagaggacaa tttggtgtca catatctttg
      301 cactgaaaaa gcaactggaa tgaagtatgc atgcaaatca atatcgaaga gaaagcttgt
      361 gaccaagaaa gatatggagg atgtaagaag ggagatattg atgttgcaac atttaacagc
      421 acaaccaaat atagtggagt ttaaaggcgc ttatgaagat gaaatgagtg tgcatttggt
      481 gatggaattg tgtagtggtg gtgaactttt tgataggata actaaaaaag gaagttattc
      541 tgaaaaagaa gcagcaaaga ttgggagaca aattgtgaat gttgtaaatg tttgtcattt
      601 tatgggagtg atgcatagag atttgaaacc tgaaaatttc ttgatggtta gtcaagatga
      661 aaatgctcca ttaaaggcta ctgattttgg tctttcagtt ttcattgaag aaggcaaaat
      721 ttacaaagaa atagtaggaa gtgcatacta tgtggcacca gaggtgttac gacgtcgtta
      781 tgggaaggag atagatgtgt ggagtgctgg tatcattttg tacattcttc ttagtggtgt
      841 ccctcctttt tggggagaga ccgaaaaggc catatttgaa gaaatattag atggtaaact
      901 tgaccttcaa agccctccat ggccatcgat atcccttggt gctaaagatt tgatctctaa
      961 gatgttgatg agaaatccta aggaccgtat cactgcagac aaggctctcg aacacccatg
     1021 gcttaaagaa gacggtgaag catcagaact gcctatggat agtgcggttt tgattcgaat
     1081 gaagcagttc agagcaatga acaagttaaa aaagctcgca ttgaaggtta ttgcagaaaa
     1141 cttagaatca acagaagaga taaagggctt gaaacaaatg ttcaacaaca tggacacgga
     1201 taaaagtggt tcgataacat acgaagaact aaaaacagga ctatcaaaac ttggatcaag
     1261 gcttgcagag ccagaaatac aacagctcat ggacgccgct gatgttgaca aaaatggaac
     1321 aattgactac atcgagttca tcactgcaac aatgcatcga cacaaacttg atagggaaga
     1381 aaatttgtac agagccttcc aattttttga caaagataat agcgggttta tcactagaga
     1441 tgaactgaaa cattctatga ctcaatacgg aatgggagat gaagcaacca ttgatgaagt
     1501 gcttgatgat gtagatactg ataaggatgg gaagatcaac tatgaagagt ttgtaacaat
     1561 gatgaggaag ggaacagttg aaacagttcc aaaacgacaa cgcctggtgt catgcggatg
     1621 gttttcggtt ttcactcgaa ggaaaattcc ggggatgttg ataggttgga ttctggattt
     1681 aacattgatg attttgggta gttataacca gaaaaactaa tatgtataac tagaaacact
     1741 tctaatttca tcaatgaaaa g
//
LOCUS       XM_071829538            2412 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839473), transcript variant X1, mRNA.
ACCESSION   XM_071829538
VERSION     XM_071829538.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2412
                     /gene="LOC139839473"
                     /note="uncharacterized LOC139839473; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139839473"
     CDS             98..2182
                     /gene="LOC139839473"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685639.1"
                     /db_xref="GeneID:139839473"
                     /translation="MLFQRSSTSNISEHVDQTRVFHKQNPTADELLRKILDLEARHAQ
                     IKQDISQIKISNNRPKPDHQSSKSASHYLRRAIGEPSNDGEVMEPLATKLTEMQYLNM
                     VQSLGQAIHIFDLQHRIFFWSRAAEEVYGLTPDEVYGKTPTEILVDPKDAVFADYLLE
                     RTVRGETWSGEFPITNKRGERFVVICTNSPFRDENRRLIGGICISSDSRPYTIMKPGL
                     SVSLPTRIESRQQPMKTSVVSKISNLASKMKLKMKIYHQGRSDDVTSIHSETAFEGES
                     STPRGHFGPSIYGVFTSITTKEHMVTRNFTSKSAHKSENKPAISKLLSPKSEAAWIGK
                     KRTVWPWKGNEREVESLNAKLGYFGWQRLEANHEHELGPHISSGNINFGSNKMEPSGM
                     SLSASRTKSTSSKNSNAIIKVEKEIDSMDYEIMWADLVTKEQIGQGSCGTVYHGLWYG
                     SDVAVKLFTYQDYSDDVMISFKKEVSLMKRLRHPNILLFMGAVTSPQHLCIVSEFLPR
                     GSLFRILQRNSNQLDWRRRLQFAMDIARGMNYLHRYNPPIVHRDLKSSNLLVDKNWTV
                     KVGDFGLSHIKHHTYLHTKSGKGTPQWMAPEVLRNEQADEKCDVYSYGVVLWEIITGK
                     IPWDDLNAMQVIAAVGFMNKRLEIPKDVDSMWVSLIESCWCSKPQSRPTFQEILYKLK
                     DLHRKYAVERRR"
     misc_feature    383..>718
                     /gene="LOC139839473"
                     /note="PAS domain [Signal transduction mechanisms];
                     Region: PAS; COG2202"
                     /db_xref="CDD:441804"
     misc_feature    1400..2140
                     /gene="LOC139839473"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(1400..1414,1424..1426,1457..1459,1463..1465,
                     1556..1558,1604..1615,1625..1627,1631..1633,1751..1753,
                     1757..1759,1763..1768,1772..1774,1805..1807,1814..1816,
                     1862..1873)
                     /gene="LOC139839473"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(1400..1414,1424..1426,1457..1459,1463..1465,
                     1556..1558,1604..1615,1625..1627,1751..1753,1757..1759,
                     1763..1768,1772..1774,1805..1807)
                     /gene="LOC139839473"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1412..1414,1625..1627,1631..1633,1751..1753,
                     1757..1759,1763..1765,1814..1816,1862..1873)
                     /gene="LOC139839473"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1802..1828,1859..1873)
                     /gene="LOC139839473"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
ORIGIN      
        1 ttgaagaaca acaggttttg gggatgtgtt tccagtcaca cgaatagacg cgcacacaat
       61 tttttatttc gatccatcat aatcagcctt tgtttgcatg ttattccaac gatcatcgac
      121 atcaaatata tctgaacacg tagatcaaac acgtgtcttt cacaaacaga acccaacagc
      181 tgatgagctg ttaagaaaga tcttggatct cgaagcacga catgctcaaa tcaaacaaga
      241 catatcacaa attaaaatct ccaataatcg gccaaaacct gaccaccaaa gctcaaagtc
      301 agcatctcat tacctacgac gagccattgg tgaaccgagt aacgatggtg aggtcatgga
      361 gcctttagct acaaagctaa cagaaatgca gtatctgaat atggtgcagt cattgggaca
      421 ggctatacat atatttgatc tccaacatcg tatattcttt tggagcagag ctgcagaaga
      481 agtttatggt cttacacctg atgaagttta tgggaaaact ccaacagaga tactagtgga
      541 tcctaaagac gctgtatttg ctgattattt gttggaacgg actgttaggg gagagacttg
      601 gtcaggggag tttcctataa cgaacaagag aggagaacgg tttgtggtta tttgtaccaa
      661 ctcaccattt cgcgatgaaa atagaagatt aattggtggt atatgtatat caagtgattc
      721 acgtccatat acaataatga agcctggcct gagcgttagt ctgccgacga ggatcgagtc
      781 tcgacaacaa cctatgaaga cttccgtagt ctcaaagata tcaaatttgg cttcaaagat
      841 gaagttgaag atgaaaatat atcatcaagg tcggagtgat gatgttacat cgattcattc
      901 tgagactgca ttcgaaggtg aatcaagcac cccgaggggg cattttggtc cgtcaatata
      961 cggagtattt acttctataa ctaccaagga gcatatggtt accagaaatt ttacatcaaa
     1021 atctgctcac aaaagtgaaa acaaacctgc gatctccaag cttttgtctc caaaatcaga
     1081 ggcggcatgg ataggtaaga agagaaccgt gtggccatgg aaaggaaacg aaagagaagt
     1141 ggagtctctt aacgctaaac tcggttattt tggttggcaa cgtttagaag ccaatcatga
     1201 acacgagctg ggtcctcata taagttctgg aaatataaac tttggtagca ataagatgga
     1261 accttcagga atgtcacttt ctgcatctcg aactaaaagc acaagtagca aaaatagtaa
     1321 tgccattatc aaagtcgaaa aggaaatcga tagtatggat tatgaaatca tgtgggcaga
     1381 tttagtaact aaagaacaga ttgggcaagg ttcatgtgga actgtatatc atggactatg
     1441 gtatggatca gatgttgcgg tcaagctatt tacatatcaa gattattcgg atgatgtgat
     1501 gatatcattt aaaaaggagg tatctcttat gaaaaggctt cgccatccaa atatattgct
     1561 cttcatgggc gcggtaactt cacctcagca tctatgcatt gtctccgagt ttcttcctcg
     1621 cggtagtttg tttcggatac ttcagcgaaa ttcaaatcag ttagattgga gacgtcgtct
     1681 tcaatttgct atggatattg caaggggcat gaattatctt caccgttaca atccacccat
     1741 cgttcaccgt gatttgaagt cttcaaatct tcttgttgat aagaattgga ctgtgaaggt
     1801 aggtgacttc ggtctctctc atatcaagca tcatacgtac ctgcacacaa agtcggggaa
     1861 aggaacgcct caatggatgg cgccagaagt tcttcgtaat gagcaagcag atgagaagtg
     1921 tgatgtgtac agctatggtg tggtattatg ggaaatcata acaggaaaga tcccttggga
     1981 tgatcttaat gcaatgcagg ttatcgcagc tgtggggttc atgaataaaa gattagagat
     2041 cccaaaagat gtggattcga tgtgggtttc acttatagaa agctgttggt gcagcaagcc
     2101 acaatcccga ccaacgttcc aagaaatact ttataaactt aaggatttgc ataggaagta
     2161 tgccgttgag cgtaggagat aatagccgga aattaaggaa ctatttacaa aacaaaatgt
     2221 ataaatgtgc acttggtttc ttcataggtg ataaaagatg caaagattgt tttgtttaat
     2281 catgttgtta tggagtaccg cacttgcata ggcttcttta acctcattga gtgttttgca
     2341 aactcattgt ttaattgagt tgcctaattt attttgagtg attagctcaa gtaaatacat
     2401 actttaatga at
//
LOCUS       XM_071829539            2653 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839473), transcript variant X2, mRNA.
ACCESSION   XM_071829539
VERSION     XM_071829539.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2653
                     /gene="LOC139839473"
                     /note="uncharacterized LOC139839473; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139839473"
     CDS             393..2423
                     /gene="LOC139839473"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685640.1"
                     /db_xref="GeneID:139839473"
                     /translation="MDKSKQNPTADELLRKILDLEARHAQIKQDISQIKISNNRPKPD
                     HQSSKSASHYLRRAIGEPSNDGEVMEPLATKLTEMQYLNMVQSLGQAIHIFDLQHRIF
                     FWSRAAEEVYGLTPDEVYGKTPTEILVDPKDAVFADYLLERTVRGETWSGEFPITNKR
                     GERFVVICTNSPFRDENRRLIGGICISSDSRPYTIMKPGLSVSLPTRIESRQQPMKTS
                     VVSKISNLASKMKLKMKIYHQGRSDDVTSIHSETAFEGESSTPRGHFGPSIYGVFTSI
                     TTKEHMVTRNFTSKSAHKSENKPAISKLLSPKSEAAWIGKKRTVWPWKGNEREVESLN
                     AKLGYFGWQRLEANHEHELGPHISSGNINFGSNKMEPSGMSLSASRTKSTSSKNSNAI
                     IKVEKEIDSMDYEIMWADLVTKEQIGQGSCGTVYHGLWYGSDVAVKLFTYQDYSDDVM
                     ISFKKEVSLMKRLRHPNILLFMGAVTSPQHLCIVSEFLPRGSLFRILQRNSNQLDWRR
                     RLQFAMDIARGMNYLHRYNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSHIKHHTYLHT
                     KSGKGTPQWMAPEVLRNEQADEKCDVYSYGVVLWEIITGKIPWDDLNAMQVIAAVGFM
                     NKRLEIPKDVDSMWVSLIESCWCSKPQSRPTFQEILYKLKDLHRKYAVERRR"
     misc_feature    624..>959
                     /gene="LOC139839473"
                     /note="PAS domain [Signal transduction mechanisms];
                     Region: PAS; COG2202"
                     /db_xref="CDD:441804"
     misc_feature    1641..2381
                     /gene="LOC139839473"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(1641..1655,1665..1667,1698..1700,1704..1706,
                     1797..1799,1845..1856,1866..1868,1872..1874,1992..1994,
                     1998..2000,2004..2009,2013..2015,2046..2048,2055..2057,
                     2103..2114)
                     /gene="LOC139839473"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(1641..1655,1665..1667,1698..1700,1704..1706,
                     1797..1799,1845..1856,1866..1868,1992..1994,1998..2000,
                     2004..2009,2013..2015,2046..2048)
                     /gene="LOC139839473"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1653..1655,1866..1868,1872..1874,1992..1994,
                     1998..2000,2004..2006,2055..2057,2103..2114)
                     /gene="LOC139839473"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(2043..2069,2100..2114)
                     /gene="LOC139839473"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
ORIGIN      
        1 ttgatttggt atttccctga atatgaagat tatttatttt atgaagagga attcacttat
       61 tgatttatag aaacagtaaa gtagtaagtt cttttttttt tttttttttt atagagtatt
      121 tgtgatgtga ttagatactt ctatatatct acatatatgt gcccatttta tgaaatgtca
      181 actttttggc gtaaattagt tggatgatga tgatgaattg attgctcaaa tcatcacggt
      241 gtttatttta ctgtgacaaa tttgaggttt tgttggttta ccgattaagg aatcttccaa
      301 aatcgtgtct cggggtttga actttaagga accatttttt gatccattaa tcagagtgtg
      361 tgtgtgtgtg tgtgtgtttc cgtggtgtaa acatggataa aagcaaacag aacccaacag
      421 ctgatgagct gttaagaaag atcttggatc tcgaagcacg acatgctcaa atcaaacaag
      481 acatatcaca aattaaaatc tccaataatc ggccaaaacc tgaccaccaa agctcaaagt
      541 cagcatctca ttacctacga cgagccattg gtgaaccgag taacgatggt gaggtcatgg
      601 agcctttagc tacaaagcta acagaaatgc agtatctgaa tatggtgcag tcattgggac
      661 aggctataca tatatttgat ctccaacatc gtatattctt ttggagcaga gctgcagaag
      721 aagtttatgg tcttacacct gatgaagttt atgggaaaac tccaacagag atactagtgg
      781 atcctaaaga cgctgtattt gctgattatt tgttggaacg gactgttagg ggagagactt
      841 ggtcagggga gtttcctata acgaacaaga gaggagaacg gtttgtggtt atttgtacca
      901 actcaccatt tcgcgatgaa aatagaagat taattggtgg tatatgtata tcaagtgatt
      961 cacgtccata tacaataatg aagcctggcc tgagcgttag tctgccgacg aggatcgagt
     1021 ctcgacaaca acctatgaag acttccgtag tctcaaagat atcaaatttg gcttcaaaga
     1081 tgaagttgaa gatgaaaata tatcatcaag gtcggagtga tgatgttaca tcgattcatt
     1141 ctgagactgc attcgaaggt gaatcaagca ccccgagggg gcattttggt ccgtcaatat
     1201 acggagtatt tacttctata actaccaagg agcatatggt taccagaaat tttacatcaa
     1261 aatctgctca caaaagtgaa aacaaacctg cgatctccaa gcttttgtct ccaaaatcag
     1321 aggcggcatg gataggtaag aagagaaccg tgtggccatg gaaaggaaac gaaagagaag
     1381 tggagtctct taacgctaaa ctcggttatt ttggttggca acgtttagaa gccaatcatg
     1441 aacacgagct gggtcctcat ataagttctg gaaatataaa ctttggtagc aataagatgg
     1501 aaccttcagg aatgtcactt tctgcatctc gaactaaaag cacaagtagc aaaaatagta
     1561 atgccattat caaagtcgaa aaggaaatcg atagtatgga ttatgaaatc atgtgggcag
     1621 atttagtaac taaagaacag attgggcaag gttcatgtgg aactgtatat catggactat
     1681 ggtatggatc agatgttgcg gtcaagctat ttacatatca agattattcg gatgatgtga
     1741 tgatatcatt taaaaaggag gtatctctta tgaaaaggct tcgccatcca aatatattgc
     1801 tcttcatggg cgcggtaact tcacctcagc atctatgcat tgtctccgag tttcttcctc
     1861 gcggtagttt gtttcggata cttcagcgaa attcaaatca gttagattgg agacgtcgtc
     1921 ttcaatttgc tatggatatt gcaaggggca tgaattatct tcaccgttac aatccaccca
     1981 tcgttcaccg tgatttgaag tcttcaaatc ttcttgttga taagaattgg actgtgaagg
     2041 taggtgactt cggtctctct catatcaagc atcatacgta cctgcacaca aagtcgggga
     2101 aaggaacgcc tcaatggatg gcgccagaag ttcttcgtaa tgagcaagca gatgagaagt
     2161 gtgatgtgta cagctatggt gtggtattat gggaaatcat aacaggaaag atcccttggg
     2221 atgatcttaa tgcaatgcag gttatcgcag ctgtggggtt catgaataaa agattagaga
     2281 tcccaaaaga tgtggattcg atgtgggttt cacttataga aagctgttgg tgcagcaagc
     2341 cacaatcccg accaacgttc caagaaatac tttataaact taaggatttg cataggaagt
     2401 atgccgttga gcgtaggaga taatagccgg aaattaagga actatttaca aaacaaaatg
     2461 tataaatgtg cacttggttt cttcataggt gataaaagat gcaaagattg ttttgtttaa
     2521 tcatgttgtt atggagtacc gcacttgcat aggcttcttt aacctcattg agtgttttgc
     2581 aaactcattg tttaattgag ttgcctaatt tattttgagt gattagctca agtaaataca
     2641 tactttaatg aat
//
LOCUS       XM_071829540            2095 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839473), transcript variant X3, mRNA.
ACCESSION   XM_071829540
VERSION     XM_071829540.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2095
                     /gene="LOC139839473"
                     /note="uncharacterized LOC139839473; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839473"
     CDS             98..1957
                     /gene="LOC139839473"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071685641.1"
                     /db_xref="GeneID:139839473"
                     /translation="MLFQRSSTSNISEHVDQTRVFHKQNPTADELLRKILDLEARHAQ
                     IKQDISQIKISNNRPKPDHQSSKSASHYLRRAIGEPSNDGEVMEPLATKLTEMQYLNM
                     VQSLGQAIHIFDLQHRIFFWSRAAEEVYGLTPDEVYGKTPTEILVDPKDAVFADYLLE
                     RTVRGETWSGEFPITNKRGERFVVICTNSPFRDENRRLIGGICISSDSRPYTIMKPGL
                     SVSLPTRIESRQQPMKTSVVSKISNLASKMKLKMKIYHQGRSDDVTSIHSETAFEGES
                     STPRGHFGPSIYGVFTSITTKEHMVTRNFTSKSAHKSENKPAISKLLSPKSEAAWIGK
                     KRTVWPWKGNEREVESLNAKLGYFGWQRLEANHEHELGPHISSGNINFGSNKMEPSGM
                     SLSASRTKSTSSKNSNAIIKVEKEIDSMDYEIMWADLVTKEQIGQGSCGTVYHGLWYG
                     SDVAVKLFTYQDYSDDVMISFKKEVSLMKRLRHPNILLFMGAVTSPQHLCIVSEFLPR
                     GSLFRILQRNSNQLDWRRRLQFAMDIARGMNYLHRYNPPIVHRDLKSSNLLVDKNWTV
                     KVTSVSLISSIIRTCTQSRGKERLNGWRQKFFVMSKQMRSVMCTAMVWYYGKS"
     misc_feature    383..>718
                     /gene="LOC139839473"
                     /note="PAS domain [Signal transduction mechanisms];
                     Region: PAS; COG2202"
                     /db_xref="CDD:441804"
     misc_feature    1400..>1801
                     /gene="LOC139839473"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1400..1411,1418..1420,1424..1426,1457..1459,
                     1463..1465,1556..1558,1604..1615,1751..1753,1763..1768,
                     1772..1774)
                     /gene="LOC139839473"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 ttgaagaaca acaggttttg gggatgtgtt tccagtcaca cgaatagacg cgcacacaat
       61 tttttatttc gatccatcat aatcagcctt tgtttgcatg ttattccaac gatcatcgac
      121 atcaaatata tctgaacacg tagatcaaac acgtgtcttt cacaaacaga acccaacagc
      181 tgatgagctg ttaagaaaga tcttggatct cgaagcacga catgctcaaa tcaaacaaga
      241 catatcacaa attaaaatct ccaataatcg gccaaaacct gaccaccaaa gctcaaagtc
      301 agcatctcat tacctacgac gagccattgg tgaaccgagt aacgatggtg aggtcatgga
      361 gcctttagct acaaagctaa cagaaatgca gtatctgaat atggtgcagt cattgggaca
      421 ggctatacat atatttgatc tccaacatcg tatattcttt tggagcagag ctgcagaaga
      481 agtttatggt cttacacctg atgaagttta tgggaaaact ccaacagaga tactagtgga
      541 tcctaaagac gctgtatttg ctgattattt gttggaacgg actgttaggg gagagacttg
      601 gtcaggggag tttcctataa cgaacaagag aggagaacgg tttgtggtta tttgtaccaa
      661 ctcaccattt cgcgatgaaa atagaagatt aattggtggt atatgtatat caagtgattc
      721 acgtccatat acaataatga agcctggcct gagcgttagt ctgccgacga ggatcgagtc
      781 tcgacaacaa cctatgaaga cttccgtagt ctcaaagata tcaaatttgg cttcaaagat
      841 gaagttgaag atgaaaatat atcatcaagg tcggagtgat gatgttacat cgattcattc
      901 tgagactgca ttcgaaggtg aatcaagcac cccgaggggg cattttggtc cgtcaatata
      961 cggagtattt acttctataa ctaccaagga gcatatggtt accagaaatt ttacatcaaa
     1021 atctgctcac aaaagtgaaa acaaacctgc gatctccaag cttttgtctc caaaatcaga
     1081 ggcggcatgg ataggtaaga agagaaccgt gtggccatgg aaaggaaacg aaagagaagt
     1141 ggagtctctt aacgctaaac tcggttattt tggttggcaa cgtttagaag ccaatcatga
     1201 acacgagctg ggtcctcata taagttctgg aaatataaac tttggtagca ataagatgga
     1261 accttcagga atgtcacttt ctgcatctcg aactaaaagc acaagtagca aaaatagtaa
     1321 tgccattatc aaagtcgaaa aggaaatcga tagtatggat tatgaaatca tgtgggcaga
     1381 tttagtaact aaagaacaga ttgggcaagg ttcatgtgga actgtatatc atggactatg
     1441 gtatggatca gatgttgcgg tcaagctatt tacatatcaa gattattcgg atgatgtgat
     1501 gatatcattt aaaaaggagg tatctcttat gaaaaggctt cgccatccaa atatattgct
     1561 cttcatgggc gcggtaactt cacctcagca tctatgcatt gtctccgagt ttcttcctcg
     1621 cggtagtttg tttcggatac ttcagcgaaa ttcaaatcag ttagattgga gacgtcgtct
     1681 tcaatttgct atggatattg caaggggcat gaattatctt caccgttaca atccacccat
     1741 cgttcaccgt gatttgaagt cttcaaatct tcttgttgat aagaattgga ctgtgaaggt
     1801 gacttcggtc tctctcatat caagcatcat acgtacctgc acacaaagtc ggggaaagga
     1861 acgcctcaat ggatggcgcc agaagttctt cgtaatgagc aagcagatga gaagtgtgat
     1921 gtgtacagct atggtgtggt attatgggaa atcataacag gaaagatccc ttgggatgat
     1981 cttaatgcaa tgcaggttat cgcagctgtg gggttcatga ataaaagatt agagatccca
     2041 aaagatgtgg attcgatgtg ggtttcactt atagaaagct gttggtgcag gttgg
//
LOCUS       XM_071829541            4723 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839474), mRNA.
ACCESSION   XM_071829541
VERSION     XM_071829541.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4723
                     /gene="LOC139839474"
                     /note="uncharacterized LOC139839474; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139839474"
     CDS             376..3744
                     /gene="LOC139839474"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685642.1"
                     /db_xref="GeneID:139839474"
                     /translation="MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNS
                     SGVTESGESEKVLLLMESGVRLHTTEYLRDKSNTPSGFTLKLRKHIRTRRLEDVRQLG
                     YDRIILFQFGVGANAYYIILELYAQGNILLTDSEFMVLTLLRSHRDDDKGLAIMARHH
                     YPVDKCRVFERTDVAKLQTTLTSFTDNESNEHVEDVAGANDTPSAPQSEKGNRKKPVD
                     SSKKKDSARAKQTTLKFVLGEALGYGPALSEHIILDSGLTPTLKVSKDLKLGDSNIQA
                     LSEGVKRFEDWLEDVISGTKIPEGYILMQQKKMGRDQLPAESSATDQIYDEFCPLLLN
                     QFNSRVFVKFGTFDDALDEFYSKIETQRSAQQQQAKESSAMQKLSKIRNDQENRVQVL
                     KKEVDRSVTMAELIEYNLEDVDAAILAVRVALANGMSWVDLARMVKEEKKAGNPVAGL
                     IDKLHLEKNSMSLLLSNNLDEMDDDEITQPVEKVEVDIGLSAHANARQWYEQKKKQES
                     KQEKTLTAHAKAFKAAEKKTLQQLSQEKTVAAISHIRKVHWFEKFNWFISSENYLVIS
                     GRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHKPDYPVPPLTLNQAGSFTVCH
                     SQAWNSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPQPLIMGFGILFR
                     LDESSLGSHLNERRVRGEEEGLNEGFDSELFKELTDSGSDKESPETEYPVNVSDLSTD
                     NNKLADSTHEIGPSDNDISNSREVSVEEDKSTAKTVSPELEDLLDKALEIGPIATSAK
                     KYELNASQADSDVNDHEEKKETTREKPYISKAERRKLKKGVTHSEVTDTGHVKENVEK
                     KKNNVELHPQKDVPTVKIDGGAKVSRGQKGKLKKMKEKYADQDEEERKIRMALLASAG
                     RARVNEQEAQREAITTSNEVKSVAGSEDGPKRCYKCKKIGHVAKDCQEHVSDKVVDGS
                     SANGSKHEDSSGDRLIDAEKIAMEEDDIKEIGEDEKEKLTDVDYLTGIPLPNDILLYA
                     VPVCAPYAALQSYKYRVKIIPGTAKKGKAVKMAMNLFGHMPEALQREKELMKACTDPE
                     LMAAIIGNVKVSAAGLSQLKQKQKKGKKAASKQR"
     misc_feature    403..2412
                     /gene="LOC139839474"
                     /note="ribosome rescue protein RqcH, archaeal type;
                     Region: RqcH_arch; NF041120"
                     /db_xref="CDD:469043"
     misc_feature    3211..3261
                     /gene="LOC139839474"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
     misc_feature    3394..3675
                     /gene="LOC139839474"
                     /note="NFACT protein C-terminal domain; Region: NFACT-C;
                     pfam11923"
                     /db_xref="CDD:432191"
ORIGIN      
        1 caaacaacaa atacacagaa tcagacttac gattgatttt cgcaaatcaa tttaaggctc
       61 tgaatttgag cgatttaaga ttgtttacgc tatacttgat cgcaattgag gactggaata
      121 gtgaataaga acggttaaga gcacgataat tgatgatttg attggtgatt aaggttaaat
      181 tgatttaggg ttttaagctc ccaaaatcgc cataacactg gagacaaaaa tagggtcaaa
      241 caactcattt gttacacgct tatactcgtt tgtttacaaa actaaagaca aacatcccta
      301 atttatcaat caatttttat tttagtttcc aatatatttc atcaatcgca gcactagttt
      361 tgaagctaaa gagagatggt gaaggttcgg atgaacacgg cggacgtcgc cgctgaggtc
      421 aagtgtttac gtcgtttaat cggaatgcgc tgttctaacg tctacgatct ttctcctaag
      481 acatatgtat tcaaattgat gaatagcagt ggagttactg aatctggaga gagtgagaag
      541 gttctgttgc tcatggaaag cggtgttcgg ttgcatacaa ctgaatatct tagggataaa
      601 agtaatactc cttctgggtt cactctcaaa ttgagaaaac acatcagaac tagaaggctt
      661 gaggacgtac gacaacttgg atatgatcgg ataattctct ttcaatttgg ggttggtgct
      721 aatgcgtact acataatatt ggagctatac gcacaaggga acatactcct caccgactcc
      781 gaattcatgg ttttaactct tctgcggtca cacagggatg atgataaagg actcgcaatt
      841 atggcacgcc atcattatcc agtagacaag tgtagagtct ttgagaggac tgatgttgca
      901 aagttacaaa caactctcac atcgtttacc gataacgaaa gtaacgaaca cgtggaagat
      961 gttgcgggtg cgaatgacac acctagtgca ccacaatcgg aaaagggaaa ccgaaagaag
     1021 cccgttgatt ctagtaaaaa gaaagatagt gcccgagcca aacaaactac attgaagttt
     1081 gttcttgggg aggctttggg ttatggacca gcactatcag aacatattat attagattct
     1141 ggtctaactc caaccttgaa agtttctaag gacctgaaat taggagatag taatattcag
     1201 gctctttctg aaggtgttaa acgatttgaa gactggctgg aagatgttat atcaggtact
     1261 aaaattcctg aaggatacat cttaatgcag caaaagaaaa tgggtagaga tcaactccct
     1321 gctgaatcat ctgctactga tcagatatat gatgagttct gcccattatt gttaaaccag
     1381 ttcaactcga gggtgtttgt gaagtttggt acgtttgatg atgcgttgga tgagttctat
     1441 agtaagattg agacccagcg atcagcacaa caacaacaag cgaaagagag ttccgcaatg
     1501 cagaagcttt ccaaaattcg caacgatcag gagaaccgtg tgcaagtgct gaagaaagaa
     1561 gtagatcggt ctgttacaat ggcagaacta attgaataca atttagaaga tgtggatgca
     1621 gctatcttag ctgtgcgagt agctcttgca aatggtatga gttgggttga tttagctcgc
     1681 atggtcaaag aggaaaagaa agctggtaat cctgttgcag gtcttatcga caagttacac
     1741 cttgaaaaaa attccatgag tctgctatta agtaataatc ttgatgaaat ggatgacgat
     1801 gagattactc aacccgtgga aaaggttgaa gttgatatag gactttctgc tcatgcaaat
     1861 gctcgccaat ggtatgagca aaagaagaaa caagagagca aacaagaaaa gactcttact
     1921 gctcatgcaa aggcttttaa ggctgccgaa aagaagacac ttcaacagct gtctcaggaa
     1981 aaaactgttg ctgctatttc acatatacgt aaggtgcact ggtttgaaaa gttcaattgg
     2041 ttcatcagca gtgagaatta tttggtcatc agtggacgtg atgctcaaca gaacgaaatg
     2101 attgtgaagc gttacatgtc caaaggagat ctgtatgtcc atgcagaact acatggagct
     2161 tctagtacag tgattaagaa tcacaagcct gattaccctg tacctccact tacattgaat
     2221 caagcaggat ccttcactgt ctgccacagc caagcatgga actcaaagat cgttacaagt
     2281 gcgtggtggg tgtatcctca ccaagtaagc aaaaccgctc ctactggcga atatcttacc
     2341 gttggtagtt tcatgatccg agggaagaaa aatttccttc cacctcagcc tctaatcatg
     2401 ggattcggca tattatttcg gttggatgag agttcattgg ggtcccactt aaatgaaaga
     2461 agagtaaggg gtgaagagga ggggttaaat gaaggtttcg acagtgagct gtttaaagag
     2521 ttgaccgatt ctggttctga taaagagtca cccgagactg aatatccagt aaacgtttca
     2581 gatttatcaa ctgataataa caaattagcg gattcaactc atgaaattgg tccatctgat
     2641 aacgatatct ccaattcgag agaagtttct gttgaagagg ataagtctac tgcaaaaacc
     2701 gtgtcccctg aacttgagga tcttcttgat aaagctctcg agattggacc aattgccaca
     2761 tcagctaaaa aatatgagct taatgcttca caagcggatt cagatgtaaa cgatcatgag
     2821 gagaagaaag aaacgacgag ggaaaaacct tatatttcta aagccgaaag aagaaagctc
     2881 aaaaaaggcg ttacacatag tgaagttaca gatactggac atgtgaaaga aaatgtggag
     2941 aagaagaaga ataatgtcga acttcatcca caaaaagatg ttccgactgt aaagatcgat
     3001 ggtggtgcga aagtcagccg tggtcagaag ggcaaactta agaagatgaa agaaaagtat
     3061 gctgaccaag acgaagaaga aagaaagatt cgaatggcgt tacttgcgtc tgctggtaga
     3121 gctagagtga atgaacaaga ggcacagagg gaagcaataa ctacaagcaa tgaggtgaaa
     3181 tctgtagccg gtagcgaaga tggtcccaaa agatgctata aatgtaagaa gattggacat
     3241 gttgctaaag attgtcaaga acatgtgtca gataaagttg tggatggtag tagtgcaaat
     3301 ggtagtaaac atgaagacag tagtggtgat agattgattg atgctgagaa gatagcaatg
     3361 gaagaagatg atataaaaga gattggtgaa gatgagaaag agaaattaac tgatgttgat
     3421 tacctcactg ggattcctct gccaaatgac attcttctgt atgcggtgcc tgtttgcgct
     3481 ccttacgctg ctttgcaatc gtacaagtat cgtgtcaaaa taatccccgg aaccgcaaag
     3541 aaaggaaaag ctgtgaaaat ggcgatgaat ttgtttggtc acatgccaga agcgttacaa
     3601 agggagaaag agttaatgaa ggcctgtacg gaccctgagc ttatggctgc gattattgga
     3661 aacgtcaaag tatctgctgc aggcctcagt caattgaagc agaaacaaaa gaaaggaaag
     3721 aaagccgcca gcaaacaaag ataagctttt gtttgtttgt ttatcttatg tcttatagac
     3781 tcctaaatat agaaaaaagt ttgagcagtg agactttaca gtttttggtt gtttgcaatc
     3841 ctatggtctt ttccacaaac ttaaggcaag ggtgtcgttt tttcaaactt tatgacgtga
     3901 aagtgttgct cttttacatt tcgatactca atggtttatt agcggttgca gttgataaaa
     3961 tactttcaat cactgatctg aaattatcta atattactct ctccaggcta ttacaataac
     4021 acaggttaac cttttgtggc tatgcccaca aaatgtcggt ctcgggctct cggcatacga
     4081 caaaccccgt ttttctattc aactaaagga tattttgatc aatatcacat cataacactt
     4141 ttttatttta tttttttata tgtatatatg tttgattttg atgtttgaag ctccaaatat
     4201 agtcacaatt cacgtcgtcc aaaaataaat gactacattt tgtattattt ttttttaaca
     4261 tcaagaagat atattagaca aaaaacgcaa accagtcaag gggtagagca aattataaag
     4321 gttagttaag aataccaatt gaaaacatca acacatgagg ctttcaagtt taaattaata
     4381 agactacatt tccaattata cttgtactaa agatttgatc actttcataa atagataatt
     4441 ggcattcgac ctatgaaaag agtctacagt tatttacaag atatcaaaaa cacgtcttaa
     4501 ctaaaagtcg attggtgatc gaacttgaaa ctaaaagcta catgtaaccc ttgttagctt
     4561 tattatatta tactagaatt tatacaaaat cctcataggt acgagtactt ttttgtttca
     4621 cataaataaa ttcataataa ggaattttgt tatccaataa accacaaaag gaaaacacat
     4681 gaaaattata aaataaatca taaaaagaaa gcacgtaaat ttt
//
LOCUS       XM_071829542            1737 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839477), mRNA.
ACCESSION   XM_071829542
VERSION     XM_071829542.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1737
                     /gene="LOC139839477"
                     /note="uncharacterized LOC139839477; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839477"
     CDS             1..1737
                     /gene="LOC139839477"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685643.1"
                     /db_xref="GeneID:139839477"
                     /translation="MLAKGRQYVKRNELVAEPALATGGTRHWVYQIVYLRSNCQKGRC
                     TSSCEAARNSALAVIRFLRWHPLMNCNGNSAAANFDGKWRAGRPRGVRGGCRVATLGR
                     IRVGSWNIGTLTGKRIELVDTFRKSNVDIVCVQETRWKGEEAIEIEDYKLWYSGSRIA
                     RNGVGIFLGKLHIDNVVDVGRFSDRIMSVSLIIKEETFTVISAYAPHAGLGDAEKKSF
                     WELLDEVVRGCPADHRLIIGGDLNGHIGAETEGYEGAHGGFGFGPRNEEGRSILEFAI
                     AHELVVANSFFKKRDAQLATFHSGDRSTQIDFLLLRKGELRTCRDCKVLPALTCSSQH
                     RLLVMDLVTKGRVGRRARVVQPRILWKNLYGANAETFRANVVERLSVEGDNVAPTEAD
                     QLWNRMTSTIRDVAKETLGMATGTSRAHKSRRESWWLSDDVQTKVALKQARFRELITL
                     GEGIAKARERRSRDLGNIKYIKDVAGQSIVREDLIRKRWEDYFASLFGRGRPERNGES
                     HEVREFQNNCFCTMINEEEVRLAIRKMGRNKAVGPDQIPIEAWKCLGGDGVRLLTNLF
                     NTTFRSANMPME"
     misc_feature    313..1023
                     /gene="LOC139839477"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(325..327,406..408,610..612,718..720,724..726,
                     919..921,997..1002)
                     /gene="LOC139839477"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(406..408,997..999)
                     /gene="LOC139839477"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(610..612,724..726,1000..1002)
                     /gene="LOC139839477"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atgttagcga agggcagaca atatgtcaaa aggaacgaat tagtggcaga gccggccctg
       61 gccacgggcg gcacgaggca ctgggtatat caaatagttt acctccgttc aaattgtcaa
      121 aaagggcgtt gcacgtcttc gtgtgaggct gcacgcaact cagcgctagc tgttatccgt
      181 ttcctgaggt ggcaccctct gatgaattgt aacggaaata gtgcagcggc aaattttgat
      241 ggcaaatggc gggcgggtag gcctagaggg gttagaggtg gttgtagggt agccaccctt
      301 ggtaggatta gagtgggtag ctggaatata ggaaccttga ctggtaagag gattgagctc
      361 gttgatacct ttcgtaagag taatgtagac attgtgtgtg ttcaagagac tagatggaag
      421 ggtgaagagg cgatagagat tgaggactat aagttgtggt actcgggttc taggatagca
      481 cggaacgggg taggtatctt tttaggtaaa ctacatatag ataacgtcgt tgacgtgggc
      541 aggtttagcg ataggattat gtcggttagt ttaattatta aggaggagac tttcacggtc
      601 attagtgcat acgcacctca tgcgggttta ggtgatgccg aaaagaagag tttctgggaa
      661 ttgttagatg aggtggtgag ggggtgccca gcggaccatc gactgattat aggtggtgat
      721 ctgaatggac atataggagc ggagacagaa ggttatgagg gagcccatgg gggctttggg
      781 tttggtccta gaaatgaaga ggggcgctca attcttgagt ttgccattgc ccacgagttg
      841 gtggtagcaa actctttctt caagaagagg gatgctcagt tagccacatt ccatagcggg
      901 gatcgtagca cccagattga ctttttgctt cttcgtaaag gggaacttag gacctgtagg
      961 gactgtaagg tccttccagc tttgacgtgc tcctcccagc acagattgct ggtcatggac
     1021 ctagtcacta agggtagagt tggcaggagg gctagggttg tacaacctag aatcctttgg
     1081 aagaacctct atggagcgaa tgcggagact tttagagcga atgttgttga gagattgagt
     1141 gtagaagggg ataacgttgc ccctacagaa gcagaccagt tatggaatcg catgacatcc
     1201 actatcagag atgtggcaaa agagacctta ggaatggcta cagggacatc gagagcccat
     1261 aagagtagaa gagagtcgtg gtggcttagt gacgatgtcc aaacgaaagt cgctttaaag
     1321 caggcgaggt ttagggagct cattactctt ggagaaggga tagccaaagc tagggagcga
     1381 agaagcaggg acttaggtaa catcaaatat atcaaggatg tagcgggtca aagtatagta
     1441 agagaagatc ttattaggaa aagatgggaa gattattttg catctctttt cggtagggga
     1501 agaccagagc ggaacggtga atcccacgag gttcgggagt ttcaaaacaa ctgtttctgc
     1561 acgatgatta acgaggagga agttagattg gccatacgaa agatggggag aaacaaagca
     1621 gtaggaccgg atcaaattcc gattgaggcg tggaagtgcc taggaggcga tggggttaga
     1681 ttgttgacaa accttttcaa cacgacgttt agaagcgcaa atatgcctat ggaatga
//
LOCUS       XM_071829543             336 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides clavaminate synthase-like
            protein At3g21360 (LOC139839478), mRNA.
ACCESSION   XM_071829543
VERSION     XM_071829543.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..336
                     /gene="LOC139839478"
                     /note="clavaminate synthase-like protein At3g21360;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139839478"
     CDS             1..336
                     /gene="LOC139839478"
                     /codon_start=1
                     /product="clavaminate synthase-like protein At3g21360"
                     /protein_id="XP_071685644.1"
                     /db_xref="GeneID:139839478"
                     /translation="MGDNAKIVIGPKPCFKYDEARQRKIWFNNLAISYNGVMDKLNDD
                     PTKQVVFGDGEMIPPNEVNDLIKMLDDECVALQWQKDDVLLLDNLAVLHSRRPLLAPP
                     RRILASFCK"
     misc_feature    <16..333
                     /gene="LOC139839478"
                     /note="Clavaminic acid synthetase (CAS) -like; CAS is a
                     trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase
                     carrying out three reactions in the biosynthesis of
                     clavulanic acid, an inhibitor of class A serine
                     beta-lactamases. In general, Fe(II)-2OG oxygenases...;
                     Region: CAS_like; cl00184"
                     /db_xref="CDD:444731"
ORIGIN      
        1 atgggggaca atgctaaaat tgtaataggt cccaaaccct gtttcaaata cgatgaggca
       61 cgacaacgca agatctggtt caataatctt gcaatatcct ataatggagt aatggataaa
      121 ctaaatgatg atccaacaaa acaagtcgtt tttggtgatg gtgaaatgat acctccgaat
      181 gaagtgaatg acttgataaa gatgttggat gatgagtgtg tagcgttgca atggcaaaag
      241 gacgatgttc tattgctaga caatttggca gttcttcatt cgcgtaggcc attgttggcc
      301 ccaccacgcc gcatactagc ttccttctgc aaataa
//
LOCUS       XM_071829544            1098 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein IQ-domain 26-like
            (LOC139839479), mRNA.
ACCESSION   XM_071829544
VERSION     XM_071829544.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1098
                     /gene="LOC139839479"
                     /note="protein IQ-domain 26-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839479"
     CDS             4..1098
                     /gene="LOC139839479"
                     /codon_start=1
                     /product="protein IQ-domain 26-like"
                     /protein_id="XP_071685645.1"
                     /db_xref="GeneID:139839479"
                     /translation="MGKTIRWLKALFGFNKNENHQSNSGTRKEKIPSCISRSRRTPTV
                     SPPETPIMKPVYSNNSHEQNRLAMAVATATASAADATIAAAHAAANFVMLTSQNHIIA
                     GDLKTPAAIKIQTMYRGYLSRKALKALKALVKIQALVRGFLVRKEAAETLLGMEALVR
                     ARSSVYSNRFRLQYDKFHSFRRASDQGRSRRMSSSSRISMDGRPNLVEVEPEEPRSRL
                     TRTNTWAWAAKTRAQTISPLFNSSRSFSIPNYHDYEPRFSTTQNTPRFPHSCGSSGYG
                     SFYDGTSKDDSFTSNPSYMANTESFRAKTRSLSAPKQRPDYGFGLKKGGGLSEVECGP
                     VLERSKSKSPALENGFKNCVMSRFGKSPKV"
     misc_feature    <328..405
                     /gene="LOC139839479"
                     /note="IQ (isoleucine-glutamine) motif containing D
                     (IQCD); Region: IQCD; cd23767"
                     /db_xref="CDD:467745"
     misc_feature    790..>951
                     /gene="LOC139839479"
                     /note="Protein of unknown function (DUF4005); Region:
                     DUF4005; pfam13178"
                     /db_xref="CDD:404128"
ORIGIN      
        1 agtatgggaa aaacaataag gtggttgaaa gctctgtttg gttttaacaa aaatgaaaat
       61 caccagtcta attccggcac ccggaaagaa aagattccat catgcatcag tcgttcacgt
      121 cgaaccccca ccgtctcacc accggaaact cccattatga aacccgttta cagcaacaat
      181 tctcacgagc aaaaccgcct tgcgatggct gttgctaccg ccaccgcgtc ggcagctgat
      241 gccaccattg ctgccgctca tgcggctgcc aatttcgtta tgttgactag tcagaatcat
      301 atcatcgctg gcgatctgaa gactcccgca gctatcaaaa ttcaaaccat gtatcgtggt
      361 tatttgtcaa ggaaagcatt gaaggcattg aaagcattgg tgaagattca agctctcgtg
      421 agaggttttt tagtgaggaa agaagcagct gaaactttgc taggaatgga agctttggtt
      481 agagcgcgat ccagcgttta ctccaacaga tttcgtcttc aatatgataa gtttcactca
      541 ttcaggaggg caagtgatca aggaaggagt agaaggatgt catcttcttc tcgaatttcc
      601 atggatggaa ggcccaacct tgttgaagtg gagcctgaag agcccagatc aagattaaca
      661 aggaccaaca catgggcttg ggctgcgaag acgagagccc aaaccatatc tccgctcttt
      721 aacagctcgc gtagtttttc cataccaaac tatcatgatt atgagccacg cttctccaca
      781 acccaaaaca cccctcgttt cccacactct tgtggctcga gtggttacgg ctctttctat
      841 gatgggactt ctaaggacga ctcttttacg agtaacccaa gttacatggc taataccgaa
      901 tcgtttaggg ccaagactag gtccctaagt gcaccaaagc aaaggccaga ttatgggttt
      961 gggcttaaga aaggaggtgg tctatctgag gtggaatgtg ggcccgtttt ggaaaggtca
     1021 aagtcaaagt caccggcact agaaaatgga ttcaagaatt gtgtgatgag taggtttggg
     1081 aagtccccaa aagtctaa
//
LOCUS       XM_071829546             654 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839480), mRNA.
ACCESSION   XM_071829546
VERSION     XM_071829546.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..654
                     /gene="LOC139839480"
                     /note="uncharacterized LOC139839480; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139839480"
     CDS             1..654
                     /gene="LOC139839480"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685647.1"
                     /db_xref="GeneID:139839480"
                     /translation="MAYGTTPDLFDKYIKIGEKMTALCLDNFCRCVFHLFALVYLRKP
                     TADDIARLYNFHAKNMVYRNCHIAWQGQYTRGANSDINVLNYSPLFNTIKEGTAPPSP
                     FNVNDHHYERGYYLCDGIYPDWAMLVKAPHNPIDEPRKKFKRFQESARKDIERDERMI
                     AAPSNRPIRLERNLRDRDVRVKEIRDRQVHNQLESDLTEHVWNFSPYFRAANINIDD"
     misc_feature    118..>465
                     /gene="LOC139839480"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcgtatg gaactacacc agatctgttt gacaaataca taaaaattgg cgagaaaatg
       61 actgctttat gtttagataa tttttgtaga tgcgtatttc atttgtttgc actagtgtat
      121 ttgagaaaac caaccgccga tgatattgcc cggctttata attttcacgc aaaaaacatg
      181 gtctaccgga attgtcatat tgcttggcaa ggacaatata ctcgaggtgc aaacagcgac
      241 attaacgttt taaattattc accgttgttt aacactataa aagagggcac tgctccacct
      301 tcaccattta atgtaaacga ccatcactac gagagagggt attacctatg tgatggtata
      361 tacccagatt gggctatgtt ggtcaaagcg ccccacaatc caattgacga accacgtaaa
      421 aagtttaaac ggtttcaaga aagtgcaaga aaagatattg aacgagatga aagaatgatt
      481 gctgcaccaa gtaaccgacc tattcggtta gaaaggaatt tgagggatcg agatgtcagg
      541 gttaaagaaa tcagagatag gcaagttcac aatcagctgg agtcagattt aaccgagcac
      601 gtttggaatt tttcacctta ttttcgtgct gctaatatta atattgatga ttaa
//
LOCUS       XM_071829547             650 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839482), mRNA.
ACCESSION   XM_071829547
VERSION     XM_071829547.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..650
                     /gene="LOC139839482"
                     /note="uncharacterized LOC139839482; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839482"
     CDS             1..585
                     /gene="LOC139839482"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685648.1"
                     /db_xref="GeneID:139839482"
                     /translation="MADTNNRNTNRNGNIRGSGNPRGNANTNGDGNTGGNGNTKLSKF
                     ELVFGCFGLTTTHVENGNVTVNMSDNKNSLGIHENCSGFSELKKRVVIKKTGGSASGG
                     GGGNASGIVSGSASAGGSGSSSGGGTGSGSGGINGSQVGNGGGGNDGSGSGIGGGNRI
                     HNVGTQHDDNYEDHYTLKIEYLFSSENPSACLVM"
ORIGIN      
        1 atggcggaca cgaacaatag aaacactaac aggaacggca acattagagg gagcggcaac
       61 cctagaggga acgccaacac taacggcgac ggcaacaccg gcgggaacgg caacactaaa
      121 ctcagtaaat ttgagcttgt gtttggatgc tttgggctaa ctacaactca tgtggagaat
      181 ggaaacgtta ctgtgaatat gagtgataac aaaaactcac tcgggataca tgaaaactgc
      241 tcaggatttt cggagttaaa aaaacgggtc gtgattaaga aaactggtgg aagtgccagt
      301 ggcggtggtg gtggaaatgc aagtggaatt gtcagtggaa gtgctagtgc cggtggaagt
      361 ggaagttcca gtggcggtgg gactggaagt ggaagtggtg gtataaatgg aagtcaagtt
      421 ggcaatggcg gtggcggtaa tgatggcagt gggagtggca ttggaggtgg aaacaggatc
      481 cacaacgttg ggacacaaca tgatgataat tacgaggacc actatactct gaaaattgag
      541 tatcttttta gctctgagaa tccaagtgct tgtttagtta tgtaatcact ttctaagagg
      601 aattatgaag taagtaagag ttcagagata caaagatcta atgtttagat
//
LOCUS       XM_071829548             486 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839483), mRNA.
ACCESSION   XM_071829548
VERSION     XM_071829548.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..486
                     /gene="LOC139839483"
                     /note="uncharacterized LOC139839483; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839483"
     CDS             1..486
                     /gene="LOC139839483"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685649.1"
                     /db_xref="GeneID:139839483"
                     /translation="MEQNSKVITKSIWKLVRVMFFMLKKGIIKRKLLVHLNMLMKRDK
                     ITRKASFSRPPLEEYEFSCKNTPSFTLFLFSTHKKHQRTRPTYDPPLVVDNCDEIVIN
                     SAVLKSLGMLTNGKSPLVERMSMMDSPFQVTKYGEDDIQVDDAAERFIRRFYNDRRLE
                     N"
ORIGIN      
        1 atggagcaaa attcaaaagt aatcaccaaa agtatatgga aattggtgcg tgtaatgttc
       61 tttatgctaa agaaaggaat catcaagcga aaattgttgg tccatcttaa catgttgatg
      121 aaacgtgaca agatcacacg caaggcctca ttctctagac cgccacttga agagtacgaa
      181 tttagttgta aaaacacccc ttctttcaca ctcttcctct tttcgaccca caagaaacac
      241 caaagaaccc gtcctactta tgaccctcca ttggttgtgg acaattgtga tgaaatagta
      301 ataaattcag cggttctaaa gtctcttggt atgttgacaa atggtaagtc tcccttggtt
      361 gagcgaatga gcatgatgga ctcaccgttt caagtaacca aatatggcga agatgatatt
      421 caggtggacg atgcggctga aaggtttata aggaggtttt ataacgaccg gagacttgaa
      481 aattag
//
LOCUS       XM_071829549            1519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nucleosome assembly protein
            1;2-like (LOC139839485), mRNA.
ACCESSION   XM_071829549
VERSION     XM_071829549.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1519
                     /gene="LOC139839485"
                     /note="nucleosome assembly protein 1;2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839485"
     CDS             99..1229
                     /gene="LOC139839485"
                     /codon_start=1
                     /product="nucleosome assembly protein 1;2-like"
                     /protein_id="XP_071685650.1"
                     /db_xref="GeneID:139839485"
                     /translation="MTSNNNNKEPLDVSDLGASLPAAAAALSAGDRVGLVNALKNKLQ
                     SMVGEHSDFLENLTPAVRKRVDVLRDIQSEHDVLEAKFFEERAALEARYQKLYEPLYS
                     KRYDIVNGVVEVDGVKDEDAMDQTDDKAKEEKGVPSFWLTAMKTNEILAEEITERDEE
                     ALKYLKDIKWCRIDDPKGFKLEFFFDTNPCFKNTILTKVYHMIEDDDPILEKAIGTEI
                     EWLPGKCLTQKILKKKPKKGSKNAKPIIKTEKCDSFFNFFSPPQVPEDEEDINEELAE
                     ELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQDDEFEGIDAEDDEDEDAEDDDDED
                     DDEDEEEEDDEEEDDAKNKKKKGGMTHGNGDQSERPPECKQQ"
     misc_feature    285..1019
                     /gene="LOC139839485"
                     /note="Nucleosome assembly protein (NAP); Region: NAP;
                     pfam00956"
                     /db_xref="CDD:460010"
ORIGIN      
        1 tttatcttta accttcaatt caatttccct ccctttattt ccctctcacc agcgtattat
       61 caatttctag ggtttctatt ccacaaaagt catccgctat gactagcaac aacaacaaca
      121 aagaaccgct cgacgtctcc gatttaggtg catctctacc agccgcagct gcagctctta
      181 gtgctgggga ccgtgttggc cttgtaaatg cactgaagaa taaacttcaa agtatggtgg
      241 gagagcactc agactttctt gagaatttga cgccagcagt ccggaagaga gtggatgttt
      301 tgagagacat tcagagtgaa catgatgtac tagaggcaaa gttttttgaa gaaagagcag
      361 cactagaagc aagataccag aaactatatg aaccattgta ttcaaagaga tatgatatag
      421 tgaatggtgt tgttgaggtt gatggtgtaa aggacgaaga tgcaatggat cagacagatg
      481 ataaagctaa agaagaaaag ggtgtgccta gcttttggct aactgcaatg aaaactaatg
      541 aaattttagc agaagagatc acagaacgag atgaagaagc tctaaagtac ttaaaggata
      601 tcaagtggtg tcgtattgat gatccaaagg gttttaagct tgaattcttt tttgatacca
      661 atccatgttt taagaacacc attctgacta aagtatatca tatgatcgag gacgatgacc
      721 ctatactaga gaaagcaata gggacagaaa ttgaatggtt acctgggaaa tgtttgacac
      781 agaaaattct taaaaagaag ccaaagaagg gatcaaagaa tgctaaaccc atcataaaga
      841 ctgagaaatg tgacagtttt ttcaactttt ttagcccccc acaagtgccc gaggatgagg
      901 aggatattaa tgaagagctg gctgaagagc ttcaaaacca gatggaacaa gactatgata
      961 ttggttcaac aatacgagac aaaattattc ctcatgctgt ttcttggttc acgggcgagg
     1021 ctgctcaaga tgatgagttt gaaggtattg atgccgagga tgatgaagat gaggatgctg
     1081 aggatgatga tgatgaagac gatgatgagg atgaggaaga ggaagatgat gaggaagaag
     1141 atgatgcgaa gaacaaaaag aagaagggcg gcatgacaca tggcaacggt gatcagagtg
     1201 agcgacctcc cgagtgcaag caacagtagc tcttggattt acatttgttg gcttcatgtg
     1261 aagggagctc atatctttat gttttagtcg tcttgggttt tacaatattg aattatttga
     1321 cgatacaact gaaatggttc atgttttagg atccttttga aatgatacta ttttctgtgg
     1381 gttggcacca agtttatgct gctggtgtgg ccttttatag tgttgttttg aatttatatt
     1441 gaatctggtg ttgtggactt gctgttaatc atcttattga tatatttaaa tttgtcgcct
     1501 ttcgtttttg attacattt
//
LOCUS       XM_071829550            3239 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X1, mRNA.
ACCESSION   XM_071829550
VERSION     XM_071829550.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3239
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             1830..2306
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685651.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNMLYFRYLDLFVVTFI
                     LSKVARTSIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIKYH"
     misc_feature    1830..2027
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    1881..1979
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 gctatctacc ctctttcttg ctatatacct ccaaatgtct acattcagat gcttctacca
       61 cacccttctt ccttccccct ttctaccacc atcaccacaa cttgcttcta ctctccacct
      121 ctactacctc cttctccatc aaatcccaca cacaccaacc ttctccgaaa ccaccaattt
      181 aataagtaag ttctatcgcc ttccattttt caagattgtt ttttggcaat ttatttaggg
      241 gtttatcaca aaattacacc aacaattgag aatgattttc ccagtttgta acttttacgt
      301 cgtctccgtc gcttagctac caggtatgat tctattttat tatttattat ttagtgtcga
      361 gcagcgccgt tgtcaccatc gccaccactt ccactcaccc gatttctcca caagccgccg
      421 taaaactaga ttgtcggaac aaacgagttc aaattactgg tccggaacga acgaacgaac
      481 gaacgagaac ctacggaata cacgaggaat taagttttag ggcactctat atataaagat
      541 tagtattttt ttaatttttt taaatttgtt tctgaagtat tattttttat cttaaattat
      601 aattcttgat tcgatgtact tttgatctgt ggttgttagt acgaaatttc aaggtcaaca
      661 atcgattgct ttcaatgttg ctctaggaga agctattgaa tgtaattgat gaatcgtaat
      721 tcatagttga agttcatatt tgatttgaaa tctgtttcgc atttatgtcc atgtctaatt
      781 tacgacaatt aaagctatta ctttatgttt ttgctatttt tctttcaatt tcaagataca
      841 caaacatcat ggtctattga ctatttgctc agtggcagta acatttttta acagattttg
      901 tatgtttcct tcattgatta atgcaattgt agatagacag atattgataa acactccctt
      961 acaatttcaa gtgtttagga aaaatgtttt atgcccttcg tttatttgta gtttgtttga
     1021 gatttatgaa acatgaacaa attatcctta cagttaattg ccttattaac agatatcgag
     1081 aaaatataat ttatggcctc tgtttgtttg tagttttttt taaataccaa tattgagggc
     1141 agactctgaa aatagataaa cagcgcgtta ggtggtacaa cacgtgcaca acttgcaatg
     1201 aagagttaga agacattcga actgggcttg gctgcaccaa tcacaatcta caacccgaca
     1261 atcacagact gtttcaggct catcttgacg acttgacaga caacataaca gaggcttcgt
     1321 tcatattttt tggagatgca ggaagagaac tcatcgctca accatgctaa acacttattt
     1381 cacaaatcaa accctacaat tgcaaagaac ttccagaagc catgaaagcc ttgcaaggaa
     1441 ctacacataa tttccaattc cagtacaatt cttcataccc aattaaacca caaaaaattc
     1501 atcgccaaac atgtctttgc aatatctaca acttccactg aaaaccaagg ctccaacaaa
     1561 cactattgat ttacacactg aatagtgttc acagttcttg attataatat ttgttttcag
     1621 aaattttgaa ggttcttatg gaagcacaat ctgagctttc aatggaattt gatcaaacaa
     1681 acactattgc tttacacacg gcttctaaac aagcccatat tgaggtggtg aagtttcttt
     1741 tggagaaaaa tagtaaattg ggaactattg caaaaagcaa ccttattacc cctttacatt
     1801 cgtgcgcatg aaaggttcat ttggatgtaa tgaaagcact tttagaaaaa gtaccggaaa
     1861 ttgctacaag agctgataaa aaaggtcaaa ccgctcttca tattgttgct aagggacaaa
     1921 gagttgacat tattaacgag cttatagtag cggataatgt gttgtttaat atggttgata
     1981 aaaagaacat tgcatttcat atagctacac gaaagcgtca aaaagaggac ccaccacttt
     2041 cttcagatct aaaaggagag accttttgcg ctctgctcgg aacacacaac atgttgtatt
     2101 ttcgttattt ggatcttttt gttgtgacat ttattttaag taaggtggcg aggacatcaa
     2161 ttgctcaggt actgactgtg atttcacaaa ctcagaagtt tgctcttagg gaagcatcaa
     2221 gaacaagaag tgtctgcctc ttgatttgcg ccctaagaaa accaaagcta ttcgaagacg
     2281 tcttacagag catcaagtac cattaatcaa catttgcttt aatagtgatt tcgtgtgttg
     2341 ggtaggtttt ttaaattttc actacgagtc tgtaacattt tttttttttt aagataggag
     2401 attaggagtt agctagggaa agacgagaat cagcttaacg tagactcttc ctcttttgct
     2461 gcctatttgt actttgtttg aattgccttg tgaagcatat ggcctccatt tcgtagagct
     2521 cgggatggaa aaaccaatag aaatgactat acgatttcgg tacctttatc aggtttcatt
     2581 aaagaccgaa agggaaaaga aggagaagta cttgaggaag tatgttatca ctaggtcaac
     2641 ttctctagaa tcatcagtaa gttgtatctt atttttcgtg tacgtttatt tcaaaatatt
     2701 atttgcaact tgcttaatta tatgcatttt tacagtcaag tgtagatatt cgttgataat
     2761 ataaggattt tggtactaaa ggctattggt ctaggttgaa ccatgtaacc attaggttgt
     2821 gtgtgaaagt ttttctgact ttttataacc ctccacaagt acctgaagat gagaatgata
     2881 ttgatgaaga gcaggctgaa gaacttcaga gtcaaacgga gcaagactat gacattgggt
     2941 aggtaataca acatcattta tattttgtac taagataaca tttgcatcta aatcatcacg
     3001 cctgatatga tcattttact ggtgagttcg tcgaagagga tgggtttgat ggtattaaag
     3061 aagacgacga agatgaacga cgacctgaat acaagcaacg gtaactttgg tgaacgaatt
     3121 ttggcccatc tcatttaagt ttgttttctt tgtatatgag gagtcctatt taattgttat
     3181 aatgtcaact ttgtatgtta agttatcatc ttgattttta actttatcat ttacatata
//
LOCUS       XM_071829551            2945 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X2, mRNA.
ACCESSION   XM_071829551
VERSION     XM_071829551.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2945
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2945
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             1830..2306
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685652.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNMLYFRYLDLFVVTFI
                     LSKVARTSIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIKYH"
     misc_feature    1830..2027
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    1881..1979
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 gctatctacc ctctttcttg ctatatacct ccaaatgtct acattcagat gcttctacca
       61 cacccttctt ccttccccct ttctaccacc atcaccacaa cttgcttcta ctctccacct
      121 ctactacctc cttctccatc aaatcccaca cacaccaacc ttctccgaaa ccaccaattt
      181 aataagtaag ttctatcgcc ttccattttt caagattgtt ttttggcaat ttatttaggg
      241 gtttatcaca aaattacacc aacaattgag aatgattttc ccagtttgta acttttacgt
      301 cgtctccgtc gcttagctac caggtatgat tctattttat tatttattat ttagtgtcga
      361 gcagcgccgt tgtcaccatc gccaccactt ccactcaccc gatttctcca caagccgccg
      421 taaaactaga ttgtcggaac aaacgagttc aaattactgg tccggaacga acgaacgaac
      481 gaacgagaac ctacggaata cacgaggaat taagttttag ggcactctat atataaagat
      541 tagtattttt ttaatttttt taaatttgtt tctgaagtat tattttttat cttaaattat
      601 aattcttgat tcgatgtact tttgatctgt ggttgttagt acgaaatttc aaggtcaaca
      661 atcgattgct ttcaatgttg ctctaggaga agctattgaa tgtaattgat gaatcgtaat
      721 tcatagttga agttcatatt tgatttgaaa tctgtttcgc atttatgtcc atgtctaatt
      781 tacgacaatt aaagctatta ctttatgttt ttgctatttt tctttcaatt tcaagataca
      841 caaacatcat ggtctattga ctatttgctc agtggcagta acatttttta acagattttg
      901 tatgtttcct tcattgatta atgcaattgt agatagacag atattgataa acactccctt
      961 acaatttcaa gtgtttagga aaaatgtttt atgcccttcg tttatttgta gtttgtttga
     1021 gatttatgaa acatgaacaa attatcctta cagttaattg ccttattaac agatatcgag
     1081 aaaatataat ttatggcctc tgtttgtttg tagttttttt taaataccaa tattgagggc
     1141 agactctgaa aatagataaa cagcgcgtta ggtggtacaa cacgtgcaca acttgcaatg
     1201 aagagttaga agacattcga actgggcttg gctgcaccaa tcacaatcta caacccgaca
     1261 atcacagact gtttcaggct catcttgacg acttgacaga caacataaca gaggcttcgt
     1321 tcatattttt tggagatgca ggaagagaac tcatcgctca accatgctaa acacttattt
     1381 cacaaatcaa accctacaat tgcaaagaac ttccagaagc catgaaagcc ttgcaaggaa
     1441 ctacacataa tttccaattc cagtacaatt cttcataccc aattaaacca caaaaaattc
     1501 atcgccaaac atgtctttgc aatatctaca acttccactg aaaaccaagg ctccaacaaa
     1561 cactattgat ttacacactg aatagtgttc acagttcttg attataatat ttgttttcag
     1621 aaattttgaa ggttcttatg gaagcacaat ctgagctttc aatggaattt gatcaaacaa
     1681 acactattgc tttacacacg gcttctaaac aagcccatat tgaggtggtg aagtttcttt
     1741 tggagaaaaa tagtaaattg ggaactattg caaaaagcaa ccttattacc cctttacatt
     1801 cgtgcgcatg aaaggttcat ttggatgtaa tgaaagcact tttagaaaaa gtaccggaaa
     1861 ttgctacaag agctgataaa aaaggtcaaa ccgctcttca tattgttgct aagggacaaa
     1921 gagttgacat tattaacgag cttatagtag cggataatgt gttgtttaat atggttgata
     1981 aaaagaacat tgcatttcat atagctacac gaaagcgtca aaaagaggac ccaccacttt
     2041 cttcagatct aaaaggagag accttttgcg ctctgctcgg aacacacaac atgttgtatt
     2101 ttcgttattt ggatcttttt gttgtgacat ttattttaag taaggtggcg aggacatcaa
     2161 ttgctcaggt actgactgtg atttcacaaa ctcagaagtt tgctcttagg gaagcatcaa
     2221 gaacaagaag tgtctgcctc ttgatttgcg ccctaagaaa accaaagcta ttcgaagacg
     2281 tcttacagag catcaagtac cattaatcaa catttgcttt aatagtgatt tcgtgtgttg
     2341 ggtaggtttt ttaaattttc actacgagtc tgtaacattt tttttttttt aagataggag
     2401 attaggagtt agctagggaa agacgagaat cagcttaacg tagactcttc ctcttttgct
     2461 gcctatttgt actttgtttg aattgccttg tgaagcatat ggcctccatt tcgtagagct
     2521 cgggatggaa aaaccaatag aaatgactat acgatttcgg tacctttatc aggtttcatt
     2581 aaagaccgaa agggaaaaga aggagaagta cttgaggaag tatgttatca ctaggtcaac
     2641 ttctctagaa tcatcatcaa gtgtagatat tcgttgataa tataaggatt ttggtactaa
     2701 aggctattgg tctaggttga accatgtaac cattaggttg tgtgtgaaag tttttctgac
     2761 tttttataac cctccacaag tacctgaaga tgagaatgat attgatgaag agcaggtaag
     2821 atcttacctt taatgtatat atttatggtt gtcgatgata ggttgtaagg tcgactccgt
     2881 tcacttatga atagctcagt ttgtattata ttttatttta ataggttgtt cgaggggaat
     2941 ttaaa
//
LOCUS       XM_071829552            3001 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X3, mRNA.
ACCESSION   XM_071829552
VERSION     XM_071829552.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3001
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             1830..2306
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685653.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNMLYFRYLDLFVVTFI
                     LSKVARTSIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIKYH"
     misc_feature    1830..2027
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    1881..1979
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 gctatctacc ctctttcttg ctatatacct ccaaatgtct acattcagat gcttctacca
       61 cacccttctt ccttccccct ttctaccacc atcaccacaa cttgcttcta ctctccacct
      121 ctactacctc cttctccatc aaatcccaca cacaccaacc ttctccgaaa ccaccaattt
      181 aataagtaag ttctatcgcc ttccattttt caagattgtt ttttggcaat ttatttaggg
      241 gtttatcaca aaattacacc aacaattgag aatgattttc ccagtttgta acttttacgt
      301 cgtctccgtc gcttagctac caggtatgat tctattttat tatttattat ttagtgtcga
      361 gcagcgccgt tgtcaccatc gccaccactt ccactcaccc gatttctcca caagccgccg
      421 taaaactaga ttgtcggaac aaacgagttc aaattactgg tccggaacga acgaacgaac
      481 gaacgagaac ctacggaata cacgaggaat taagttttag ggcactctat atataaagat
      541 tagtattttt ttaatttttt taaatttgtt tctgaagtat tattttttat cttaaattat
      601 aattcttgat tcgatgtact tttgatctgt ggttgttagt acgaaatttc aaggtcaaca
      661 atcgattgct ttcaatgttg ctctaggaga agctattgaa tgtaattgat gaatcgtaat
      721 tcatagttga agttcatatt tgatttgaaa tctgtttcgc atttatgtcc atgtctaatt
      781 tacgacaatt aaagctatta ctttatgttt ttgctatttt tctttcaatt tcaagataca
      841 caaacatcat ggtctattga ctatttgctc agtggcagta acatttttta acagattttg
      901 tatgtttcct tcattgatta atgcaattgt agatagacag atattgataa acactccctt
      961 acaatttcaa gtgtttagga aaaatgtttt atgcccttcg tttatttgta gtttgtttga
     1021 gatttatgaa acatgaacaa attatcctta cagttaattg ccttattaac agatatcgag
     1081 aaaatataat ttatggcctc tgtttgtttg tagttttttt taaataccaa tattgagggc
     1141 agactctgaa aatagataaa cagcgcgtta ggtggtacaa cacgtgcaca acttgcaatg
     1201 aagagttaga agacattcga actgggcttg gctgcaccaa tcacaatcta caacccgaca
     1261 atcacagact gtttcaggct catcttgacg acttgacaga caacataaca gaggcttcgt
     1321 tcatattttt tggagatgca ggaagagaac tcatcgctca accatgctaa acacttattt
     1381 cacaaatcaa accctacaat tgcaaagaac ttccagaagc catgaaagcc ttgcaaggaa
     1441 ctacacataa tttccaattc cagtacaatt cttcataccc aattaaacca caaaaaattc
     1501 atcgccaaac atgtctttgc aatatctaca acttccactg aaaaccaagg ctccaacaaa
     1561 cactattgat ttacacactg aatagtgttc acagttcttg attataatat ttgttttcag
     1621 aaattttgaa ggttcttatg gaagcacaat ctgagctttc aatggaattt gatcaaacaa
     1681 acactattgc tttacacacg gcttctaaac aagcccatat tgaggtggtg aagtttcttt
     1741 tggagaaaaa tagtaaattg ggaactattg caaaaagcaa ccttattacc cctttacatt
     1801 cgtgcgcatg aaaggttcat ttggatgtaa tgaaagcact tttagaaaaa gtaccggaaa
     1861 ttgctacaag agctgataaa aaaggtcaaa ccgctcttca tattgttgct aagggacaaa
     1921 gagttgacat tattaacgag cttatagtag cggataatgt gttgtttaat atggttgata
     1981 aaaagaacat tgcatttcat atagctacac gaaagcgtca aaaagaggac ccaccacttt
     2041 cttcagatct aaaaggagag accttttgcg ctctgctcgg aacacacaac atgttgtatt
     2101 ttcgttattt ggatcttttt gttgtgacat ttattttaag taaggtggcg aggacatcaa
     2161 ttgctcaggt actgactgtg atttcacaaa ctcagaagtt tgctcttagg gaagcatcaa
     2221 gaacaagaag tgtctgcctc ttgatttgcg ccctaagaaa accaaagcta ttcgaagacg
     2281 tcttacagag catcaagtac cattaatcaa catttgcttt aatagtgatt tcgtgtgttg
     2341 ggtaggtttt ttaaattttc actacgagtc tgtaacattt tttttttttt aagataggag
     2401 attaggagtt agctagggaa agacgagaat cagcttaacg tagactcttc ctcttttgct
     2461 gcctatttgt actttgtttg aattgccttg tgaagcatat ggcctccatt tcgtagagct
     2521 cgggatggaa aaaccaatag aaatgactat acgatttcgg tacctttatc aggtttcatt
     2581 aaagaccgaa agggaaaaga aggagaagta cttgaggaag tatgttatca ctaggtcaac
     2641 ttctctagaa tcatcagctg aagaacttca gagtcaaacg gagcaagact atgacattgg
     2701 gtaggtaata caacatcatt tatattttgt actaagataa catttgcatc taaatcatca
     2761 cgcctgatat gatcatttta ctggtgagtt cgtcgaagag gatgggtttg atggtattaa
     2821 agaagacgac gaagatgaac gacgacctga atacaagcaa cggtaacttt ggtgaacgaa
     2881 ttttggccca tctcatttaa gtttgttttc tttgtatatg aggagtccta tttaattgtt
     2941 ataatgtcaa ctttgtatgt taagttatca tcttgatttt taactttatc atttacatat
     3001 a
//
LOCUS       XM_071829553            2233 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X4, mRNA.
ACCESSION   XM_071829553
VERSION     XM_071829553.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2233
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             1039..1515
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685654.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNMLYFRYLDLFVVTFI
                     LSKVARTSIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIKYH"
     misc_feature    1039..1236
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    1090..1188
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 ctatctaccc tctttcttgc tatatacctc caaatgtcta cattcagatg cttctaccac
       61 acccttcttc cttccccctt tctaccacca tcaccacaac ttgcttctac tctccacctc
      121 tactacctcc ttctccatca aatcccacac acaccaacct tctccgaaac caccaattta
      181 ataagtaagt tctatcgcct tccatttttc aagattgttt tttggcaatt tatttagggg
      241 tttatcacaa aattacacca acaattgaga atgattttcc cagtttgtaa cttttacgtc
      301 gtctccgtcg cttagctacc agtttttttt aaataccaat attgagggca gactctgaaa
      361 atagataaac agcgcgttag gtggtacaac acgtgcacaa cttgcaatga agagttagaa
      421 gacattcgaa ctgggcttgg ctgcaccaat cacaatctac aacccgacaa tcacagactg
      481 tttcaggctc atcttgacga cttgacagac aacataacag aggcttcgtt catatttttt
      541 ggagatgcag gaagagaact catcgctcaa ccatgctaaa cacttatttc acaaatcaaa
      601 ccctacaatt gcaaagaact tccagaagcc atgaaagcct tgcaaggaac tacacataat
      661 ttccaattcc agtacaattc ttcataccca attaaaccac aaaaaattca tcgccaaaca
      721 tgtctttgca atatctacaa cttccactga aaaccaaggc tccaacaaac actattgatt
      781 tacacactga atagtgttca cagttcttga ttataatatt tgttttcaga aattttgaag
      841 gttcttatgg aagcacaatc tgagctttca atggaatttg atcaaacaaa cactattgct
      901 ttacacacgg cttctaaaca agcccatatt gaggtggtga agtttctttt ggagaaaaat
      961 agtaaattgg gaactattgc aaaaagcaac cttattaccc ctttacattc gtgcgcatga
     1021 aaggttcatt tggatgtaat gaaagcactt ttagaaaaag taccggaaat tgctacaaga
     1081 gctgataaaa aaggtcaaac cgctcttcat attgttgcta agggacaaag agttgacatt
     1141 attaacgagc ttatagtagc ggataatgtg ttgtttaata tggttgataa aaagaacatt
     1201 gcatttcata tagctacacg aaagcgtcaa aaagaggacc caccactttc ttcagatcta
     1261 aaaggagaga ccttttgcgc tctgctcgga acacacaaca tgttgtattt tcgttatttg
     1321 gatctttttg ttgtgacatt tattttaagt aaggtggcga ggacatcaat tgctcaggta
     1381 ctgactgtga tttcacaaac tcagaagttt gctcttaggg aagcatcaag aacaagaagt
     1441 gtctgcctct tgatttgcgc cctaagaaaa ccaaagctat tcgaagacgt cttacagagc
     1501 atcaagtacc attaatcaac atttgcttta atagtgattt cgtgtgttgg gtaggttttt
     1561 taaattttca ctacgagtct gtaacatttt ttttttttta agataggaga ttaggagtta
     1621 gctagggaaa gacgagaatc agcttaacgt agactcttcc tcttttgctg cctatttgta
     1681 ctttgtttga attgccttgt gaagcatatg gcctccattt cgtagagctc gggatggaaa
     1741 aaccaataga aatgactata cgatttcggt acctttatca ggtttcatta aagaccgaaa
     1801 gggaaaagaa ggagaagtac ttgaggaagt atgttatcac taggtcaact tctctagaat
     1861 catcagtaag ttgtatctta tttttcgtgt acgtttattt caaaatatta tttgcaactt
     1921 gcttaattat atgcattttt acagtcaagt gtagatattc gttgataata taaggatttt
     1981 ggtactaaag gctattggtc taggttgaac catgtaacca ttaggttgtg tgtgaaagtt
     2041 tttctgactt tttataaccc tccacaagta cctgaagatg agaatgatat tgatgaagag
     2101 caggtaagat cttaccttta atgtatatat ttatggttgt cgatgatagg ttgtaaggtc
     2161 gactccgttc acttatgaat agctcagttt gtattatatt ttattttaat aggttgttcg
     2221 aggggaattt aaa
//
LOCUS       XM_071829554            2855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X5, mRNA.
ACCESSION   XM_071829554
VERSION     XM_071829554.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2855
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             1661..2137
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685655.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNMLYFRYLDLFVVTFI
                     LSKVARTSIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIKYH"
     misc_feature    1661..1858
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    1712..1810
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 gctatctacc ctctttcttg ctatatacct ccaaatgtct acattcagat gcttctacca
       61 cacccttctt ccttccccct ttctaccacc atcaccacaa cttgcttcta ctctccacct
      121 ctactacctc cttctccatc aaatcccaca cacaccaacc ttctccgaaa ccaccaattt
      181 aataatgtcg agcagcgccg ttgtcaccat cgccaccact tccactcacc cgatttctcc
      241 acaagccgcc gtaaaactag attgtcggaa caaacgagtt caaattactg gtccggaacg
      301 aacgaacgaa cgaacgagaa cctacggaat acacgaggaa ttaagtttta gggcactcta
      361 tatataaaga ttagtatttt tttaattttt ttaaatttgt ttctgaagta ttatttttta
      421 tcttaaatta taattcttga ttcgatgtac ttttgatctg tggttgttag tacgaaattt
      481 caaggtcaac aatcgattgc tttcaatgtt gctctaggag aagctattga atgtaattga
      541 tgaatcgtaa ttcatagttg aagttcatat ttgatttgaa atctgtttcg catttatgtc
      601 catgtctaat ttacgacaat taaagctatt actttatgtt tttgctattt ttctttcaat
      661 ttcaagatac acaaacatca tggtctattg actatttgct cagtggcagt aacatttttt
      721 aacagatttt gtatgtttcc ttcattgatt aatgcaattg tagatagaca gatattgata
      781 aacactccct tacaatttca agtgtttagg aaaaatgttt tatgcccttc gtttatttgt
      841 agtttgtttg agatttatga aacatgaaca aattatcctt acagttaatt gccttattaa
      901 cagatatcga gaaaatataa tttatggcct ctgtttgttt gtagtttttt ttaaatacca
      961 atattgaggg cagactctga aaatagataa acagcgcgtt aggtggtaca acacgtgcac
     1021 aacttgcaat gaagagttag aagacattcg aactgggctt ggctgcacca atcacaatct
     1081 acaacccgac aatcacagac tgtttcaggc tcatcttgac gacttgacag acaacataac
     1141 agaggcttcg ttcatatttt ttggagatgc aggaagagaa ctcatcgctc aaccatgcta
     1201 aacacttatt tcacaaatca aaccctacaa ttgcaaagaa cttccagaag ccatgaaagc
     1261 cttgcaagga actacacata atttccaatt ccagtacaat tcttcatacc caattaaacc
     1321 acaaaaaatt catcgccaaa catgtctttg caatatctac aacttccact gaaaaccaag
     1381 gctccaacaa acactattga tttacacact gaatagtgtt cacagttctt gattataata
     1441 tttgttttca gaaattttga aggttcttat ggaagcacaa tctgagcttt caatggaatt
     1501 tgatcaaaca aacactattg ctttacacac ggcttctaaa caagcccata ttgaggtggt
     1561 gaagtttctt ttggagaaaa atagtaaatt gggaactatt gcaaaaagca accttattac
     1621 ccctttacat tcgtgcgcat gaaaggttca tttggatgta atgaaagcac ttttagaaaa
     1681 agtaccggaa attgctacaa gagctgataa aaaaggtcaa accgctcttc atattgttgc
     1741 taagggacaa agagttgaca ttattaacga gcttatagta gcggataatg tgttgtttaa
     1801 tatggttgat aaaaagaaca ttgcatttca tatagctaca cgaaagcgtc aaaaagagga
     1861 cccaccactt tcttcagatc taaaaggaga gaccttttgc gctctgctcg gaacacacaa
     1921 catgttgtat tttcgttatt tggatctttt tgttgtgaca tttattttaa gtaaggtggc
     1981 gaggacatca attgctcagg tactgactgt gatttcacaa actcagaagt ttgctcttag
     2041 ggaagcatca agaacaagaa gtgtctgcct cttgatttgc gccctaagaa aaccaaagct
     2101 attcgaagac gtcttacaga gcatcaagta ccattaatca acatttgctt taatagtgat
     2161 ttcgtgtgtt gggtaggttt tttaaatttt cactacgagt ctgtaacatt tttttttttt
     2221 taagatagga gattaggagt tagctaggga aagacgagaa tcagcttaac gtagactctt
     2281 cctcttttgc tgcctatttg tactttgttt gaattgcctt gtgaagcata tggcctccat
     2341 ttcgtagagc tcgggatgga aaaaccaata gaaatgacta tacgatttcg gtacctttat
     2401 caggtttcat taaagaccga aagggaaaag aaggagaagt acttgaggaa gtatgttatc
     2461 actaggtcaa cttctctaga atcatcagta agttgtatct tatttttcgt gtacgtttat
     2521 ttcaaaatat tatttgcaac ttgcttaatt atatgcattt ttacagtcaa gtgtagatat
     2581 tcgttgataa tataaggatt ttggtactaa aggctattgg tctaggttga accatgtaac
     2641 cattaggttg tgtgtgaaag tttttctgac tttttataac cctccacaag tacctgaaga
     2701 tgagaatgat attgatgaag agcaggtaag atcttacctt taatgtatat atttatggtt
     2761 gtcgatgata ggttgtaagg tcgactccgt tcacttatga atagctcagt ttgtattata
     2821 ttttatttta ataggttgtt cgaggggaat ttaaa
//
LOCUS       XM_071829555            2869 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X6, mRNA.
ACCESSION   XM_071829555
VERSION     XM_071829555.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2869
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             1675..2151
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685656.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNMLYFRYLDLFVVTFI
                     LSKVARTSIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIKYH"
     misc_feature    1675..1872
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    1726..1824
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 gttgctatct accctctttc ttgctatata cctccaaatg tctacattca gatgcttcta
       61 ccacaccctt cttccttccc cctttctacc accatcacca caacttgctt ctactctcca
      121 cctctactac ctccttctcc atcaaatccc acacacacca accttctccg aaaccaccaa
      181 tttaataagt aagttctatc gccttccatt tttcaagatt gttttttggc aatttattta
      241 ggggtttatc acaaaattac accaacaatt gagaatgatt ttcccagttt gtaactttta
      301 cgtcgtctcc gtcgcttagc taccaggtat gattctattt tattatttat tatttagtgt
      361 cgagcagcgc cgttgtcacc atcgccacca cttccactca cccgatttct ccacaagccg
      421 ccgtaaaact agattgtcgg aacaaacgag ttcaaattac tggtccggaa cgaacgaacg
      481 aacgaacgag aacctacgga atacacgagg aattaagttt tagggcactc tatatataaa
      541 gattagtatt tttttaattt ttttaaattt gtttctgaag tattattttt tatcttaaat
      601 tataattctt gattcgatgt acttttgatc tgtggttgtt agtacgaaat ttcaaggtca
      661 acaatcgatt gctttcaatg ttgctctagg agaagctatt gaatgtaatt gatgaatcgt
      721 aattcatagt tgaagttcat atttgatttg aaatctgttt cgcatttatg tccatgtcta
      781 atttacgaca attaaagcta ttactttatg tttttgctat ttttctttca atttcaagat
      841 acacaaacat catggtctat tgactatttg ctcagtggca gtaacatttt ttaacagatt
      901 ttgtatgttt ccttcattga ttaatgcaat tgtagataga cagatattga taaacactcc
      961 cttacaattt caagtgttta ggaaaaatgt tttatgccct tcgtttattt gtagtttgtt
     1021 tgagatttat gaaacatgaa caaattatcc ttacagttaa ttgccttatt aacagatatc
     1081 gagaaaatat aatttatggc ctctgtttgt ttgtagtttt ttttaaatac caatattgag
     1141 ggcagactct gaaaatagat aaacagcgcg ttaggtggta caacacgtgc acaacttgca
     1201 atgaagagtt agaagacatt cgaactgggc ttggctgcac caatcacaat ctacaacccg
     1261 acaatcacag actgtttcag gctcatcttg acgacttgac agacaacata acagaggctt
     1321 cgttcatatt ttttggagat gcaggaagag aactcatcgc tcaaccatgc taaacactta
     1381 tttcacaaat caaaccctac aattgcaaag aacttccaga agccatgaaa gccttgcaag
     1441 gaactacaca taatttccaa ttccaaaatt ttgaaggttc ttatggaagc acaatctgag
     1501 ctttcaatgg aatttgatca aacaaacact attgctttac acacggcttc taaacaagcc
     1561 catattgagg tggtgaagtt tcttttggag aaaaatagta aattgggaac tattgcaaaa
     1621 agcaacctta ttaccccttt acattcgtgc gcatgaaagg ttcatttgga tgtaatgaaa
     1681 gcacttttag aaaaagtacc ggaaattgct acaagagctg ataaaaaagg tcaaaccgct
     1741 cttcatattg ttgctaaggg acaaagagtt gacattatta acgagcttat agtagcggat
     1801 aatgtgttgt ttaatatggt tgataaaaag aacattgcat ttcatatagc tacacgaaag
     1861 cgtcaaaaag aggacccacc actttcttca gatctaaaag gagagacctt ttgcgctctg
     1921 ctcggaacac acaacatgtt gtattttcgt tatttggatc tttttgttgt gacatttatt
     1981 ttaagtaagg tggcgaggac atcaattgct caggtactga ctgtgatttc acaaactcag
     2041 aagtttgctc ttagggaagc atcaagaaca agaagtgtct gcctcttgat ttgcgcccta
     2101 agaaaaccaa agctattcga agacgtctta cagagcatca agtaccatta atcaacattt
     2161 gctttaatag tgatttcgtg tgttgggtag gttttttaaa ttttcactac gagtctgtaa
     2221 catttttttt tttttaagat aggagattag gagttagcta gggaaagacg agaatcagct
     2281 taacgtagac tcttcctctt ttgctgccta tttgtacttt gtttgaattg ccttgtgaag
     2341 catatggcct ccatttcgta gagctcggga tggaaaaacc aatagaaatg actatacgat
     2401 ttcggtacct ttatcaggtt tcattaaaga ccgaaaggga aaagaaggag aagtacttga
     2461 ggaagtatgt tatcactagg tcaacttctc tagaatcatc agtaagttgt atcttatttt
     2521 tcgtgtacgt ttatttcaaa atattatttg caacttgctt aattatatgc atttttacag
     2581 tcaagtgtag atattcgttg ataatataag gattttggta ctaaaggcta ttggtctagg
     2641 ttgaaccatg taaccattag gttgtgtgtg aaagtttttc tgacttttta taaccctcca
     2701 caagtacctg aagatgagaa tgatattgat gaagagcagg taagatctta cctttaatgt
     2761 atatatttat ggttgtcgat gataggttgt aaggtcgact ccgttcactt atgaatagct
     2821 cagtttgtat tatattttat tttaataggt tgttcgaggg gaatttaaa
//
LOCUS       XM_071829556            2095 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X7, mRNA.
ACCESSION   XM_071829556
VERSION     XM_071829556.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2095
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             901..1377
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685657.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNMLYFRYLDLFVVTFI
                     LSKVARTSIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIKYH"
     misc_feature    901..1098
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    952..1050
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 ctatctaccc tctttcttgc tatatacctc caaatgtcta cattcagatg cttctaccac
       61 acccttcttc cttccccctt tctaccacca tcaccacaac ttgcttctac tctccacctc
      121 tactacctcc ttctccatca aatcccacac acaccaacct tctccgaaac caccaattta
      181 ataatttttt ttaaatacca atattgaggg cagactctga aaatagataa acagcgcgtt
      241 aggtggtaca acacgtgcac aacttgcaat gaagagttag aagacattcg aactgggctt
      301 ggctgcacca atcacaatct acaacccgac aatcacagac tgtttcaggc tcatcttgac
      361 gacttgacag acaacataac agaggcttcg ttcatatttt ttggagatgc aggaagagaa
      421 ctcatcgctc aaccatgcta aacacttatt tcacaaatca aaccctacaa ttgcaaagaa
      481 cttccagaag ccatgaaagc cttgcaagga actacacata atttccaatt ccagtacaat
      541 tcttcatacc caattaaacc acaaaaaatt catcgccaaa catgtctttg caatatctac
      601 aacttccact gaaaaccaag gctccaacaa acactattga tttacacact gaatagtgtt
      661 cacagttctt gattataata tttgttttca gaaattttga aggttcttat ggaagcacaa
      721 tctgagcttt caatggaatt tgatcaaaca aacactattg ctttacacac ggcttctaaa
      781 caagcccata ttgaggtggt gaagtttctt ttggagaaaa atagtaaatt gggaactatt
      841 gcaaaaagca accttattac ccctttacat tcgtgcgcat gaaaggttca tttggatgta
      901 atgaaagcac ttttagaaaa agtaccggaa attgctacaa gagctgataa aaaaggtcaa
      961 accgctcttc atattgttgc taagggacaa agagttgaca ttattaacga gcttatagta
     1021 gcggataatg tgttgtttaa tatggttgat aaaaagaaca ttgcatttca tatagctaca
     1081 cgaaagcgtc aaaaagagga cccaccactt tcttcagatc taaaaggaga gaccttttgc
     1141 gctctgctcg gaacacacaa catgttgtat tttcgttatt tggatctttt tgttgtgaca
     1201 tttattttaa gtaaggtggc gaggacatca attgctcagg tactgactgt gatttcacaa
     1261 actcagaagt ttgctcttag ggaagcatca agaacaagaa gtgtctgcct cttgatttgc
     1321 gccctaagaa aaccaaagct attcgaagac gtcttacaga gcatcaagta ccattaatca
     1381 acatttgctt taatagtgat ttcgtgtgtt gggtaggttt tttaaatttt cactacgagt
     1441 ctgtaacatt tttttttttt taagatagga gattaggagt tagctaggga aagacgagaa
     1501 tcagcttaac gtagactctt cctcttttgc tgcctatttg tactttgttt gaattgcctt
     1561 gtgaagcata tggcctccat ttcgtagagc tcgggatgga aaaaccaata gaaatgacta
     1621 tacgatttcg gtacctttat caggtttcat taaagaccga aagggaaaag aaggagaagt
     1681 acttgaggaa gtatgttatc actaggtcaa cttctctaga atcatcagta agttgtatct
     1741 tatttttcgt gtacgtttat ttcaaaatat tatttgcaac ttgcttaatt atatgcattt
     1801 ttacagtcaa gtgtagatat tcgttgataa tataaggatt ttggtactaa aggctattgg
     1861 tctaggttga accatgtaac cattaggttg tgtgtgaaag tttttctgac tttttataac
     1921 cctccacaag tacctgaaga tgagaatgat attgatgaag agcaggtaag atcttacctt
     1981 taatgtatat atttatggtt gtcgatgata ggttgtaagg tcgactccgt tcacttatga
     2041 atagctcagt ttgtattata ttttatttta ataggttgtt cgaggggaat ttaaa
//
LOCUS       XM_071829557            2927 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X8, mRNA.
ACCESSION   XM_071829557
VERSION     XM_071829557.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2927
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             1830..2300
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685658.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNMLYFRYLDLFVVTFI
                     LSKVARTSIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIK"
     misc_feature    1830..2027
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    1881..1979
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 gctatctacc ctctttcttg ctatatacct ccaaatgtct acattcagat gcttctacca
       61 cacccttctt ccttccccct ttctaccacc atcaccacaa cttgcttcta ctctccacct
      121 ctactacctc cttctccatc aaatcccaca cacaccaacc ttctccgaaa ccaccaattt
      181 aataagtaag ttctatcgcc ttccattttt caagattgtt ttttggcaat ttatttaggg
      241 gtttatcaca aaattacacc aacaattgag aatgattttc ccagtttgta acttttacgt
      301 cgtctccgtc gcttagctac caggtatgat tctattttat tatttattat ttagtgtcga
      361 gcagcgccgt tgtcaccatc gccaccactt ccactcaccc gatttctcca caagccgccg
      421 taaaactaga ttgtcggaac aaacgagttc aaattactgg tccggaacga acgaacgaac
      481 gaacgagaac ctacggaata cacgaggaat taagttttag ggcactctat atataaagat
      541 tagtattttt ttaatttttt taaatttgtt tctgaagtat tattttttat cttaaattat
      601 aattcttgat tcgatgtact tttgatctgt ggttgttagt acgaaatttc aaggtcaaca
      661 atcgattgct ttcaatgttg ctctaggaga agctattgaa tgtaattgat gaatcgtaat
      721 tcatagttga agttcatatt tgatttgaaa tctgtttcgc atttatgtcc atgtctaatt
      781 tacgacaatt aaagctatta ctttatgttt ttgctatttt tctttcaatt tcaagataca
      841 caaacatcat ggtctattga ctatttgctc agtggcagta acatttttta acagattttg
      901 tatgtttcct tcattgatta atgcaattgt agatagacag atattgataa acactccctt
      961 acaatttcaa gtgtttagga aaaatgtttt atgcccttcg tttatttgta gtttgtttga
     1021 gatttatgaa acatgaacaa attatcctta cagttaattg ccttattaac agatatcgag
     1081 aaaatataat ttatggcctc tgtttgtttg tagttttttt taaataccaa tattgagggc
     1141 agactctgaa aatagataaa cagcgcgtta ggtggtacaa cacgtgcaca acttgcaatg
     1201 aagagttaga agacattcga actgggcttg gctgcaccaa tcacaatcta caacccgaca
     1261 atcacagact gtttcaggct catcttgacg acttgacaga caacataaca gaggcttcgt
     1321 tcatattttt tggagatgca ggaagagaac tcatcgctca accatgctaa acacttattt
     1381 cacaaatcaa accctacaat tgcaaagaac ttccagaagc catgaaagcc ttgcaaggaa
     1441 ctacacataa tttccaattc cagtacaatt cttcataccc aattaaacca caaaaaattc
     1501 atcgccaaac atgtctttgc aatatctaca acttccactg aaaaccaagg ctccaacaaa
     1561 cactattgat ttacacactg aatagtgttc acagttcttg attataatat ttgttttcag
     1621 aaattttgaa ggttcttatg gaagcacaat ctgagctttc aatggaattt gatcaaacaa
     1681 acactattgc tttacacacg gcttctaaac aagcccatat tgaggtggtg aagtttcttt
     1741 tggagaaaaa tagtaaattg ggaactattg caaaaagcaa ccttattacc cctttacatt
     1801 cgtgcgcatg aaaggttcat ttggatgtaa tgaaagcact tttagaaaaa gtaccggaaa
     1861 ttgctacaag agctgataaa aaaggtcaaa ccgctcttca tattgttgct aagggacaaa
     1921 gagttgacat tattaacgag cttatagtag cggataatgt gttgtttaat atggttgata
     1981 aaaagaacat tgcatttcat atagctacac gaaagcgtca aaaagaggac ccaccacttt
     2041 cttcagatct aaaaggagag accttttgcg ctctgctcgg aacacacaac atgttgtatt
     2101 ttcgttattt ggatcttttt gttgtgacat ttattttaag taaggtggcg aggacatcaa
     2161 ttgctcaggt actgactgtg atttcacaaa ctcagaagtt tgctcttagg gaagcatcaa
     2221 gaacaagaag tgtctgcctc ttgatttgcg ccctaagaaa accaaagcta ttcgaagacg
     2281 tcttacagag catcaaatag gagattagga gttagctagg gaaagacgag aatcagctta
     2341 acgtagactc ttcctctttt gctgcctatt tgtactttgt ttgaattgcc ttgtgaagca
     2401 tatggcctcc atttcgtaga gctcgggatg gaaaaaccaa tagaaatgac tatacgattt
     2461 cggtaccttt atcaggtttc attaaagacc gaaagggaaa agaaggagaa gtacttgagg
     2521 aagtatgtta tcactaggtc aacttctcta gaatcatcag taagttgtat cttatttttc
     2581 gtgtacgttt atttcaaaat attatttgca acttgcttaa ttatatgcat ttttacagtc
     2641 aagtgtagat attcgttgat aatataagga ttttggtact aaaggctatt ggtctaggtt
     2701 gaaccatgta accattaggt tgtgtgtgaa agtttttctg actttttata accctccaca
     2761 agtacctgaa gatgagaatg atattgatga agagcaggta agatcttacc tttaatgtat
     2821 atatttatgg ttgtcgatga taggttgtaa ggtcgactcc gttcacttat gaatagctca
     2881 gtttgtatta tattttattt taataggttg ttcgagggga atttaaa
//
LOCUS       XM_071829558            3403 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X9, mRNA.
ACCESSION   XM_071829558
VERSION     XM_071829558.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3403
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             2404..2685
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071685659.1"
                     /db_xref="GeneID:139839486"
                     /translation="MDNKIWFEFLIFGASESIKLDIWLYFRYLDLFVVTFILSKVART
                     SIAQVLTVISQTQKFALREASRTRSVCLLICALRKPKLFEDVLQSIKYH"
ORIGIN      
        1 tgctatctac cctctttctt gctatatacc tccaaatgtc tacattcaga tgcttctacc
       61 acacccttct tccttccccc tttctaccac catcaccaca acttgcttct actctccacc
      121 tctactacct ccttctccat caaatcccac acacaccaac cttctccgaa accaccaatt
      181 taataagtaa gttctatcgc cttccatttt tcaagattgt tttttggcaa tttatttagg
      241 ggtttatcac aaaattacac caacaattga gaatgatttt cccagtttgt aacttttacg
      301 tcgtctccgt cgcttagcta ccaggtatga ttctatttta ttatttatta tttagtgtcg
      361 agcagcgccg ttgtcaccat cgccaccact tccactcacc cgatttctcc acaagccgcc
      421 gtaaaactag attgtcggaa caaacgagtt caaattactg gtccggaacg aacgaacgaa
      481 cgaacgagaa cctacggaat acacgaggaa ttaagtttta gggcactcta tatataaaga
      541 ttagtatttt tttaattttt ttaaatttgt ttctgaagta ttatttttta tcttaaatta
      601 taattcttga ttcgatgtac ttttgatctg tggttgttag tacgaaattt caaggtcaac
      661 aatcgattgc tttcaatgtt gctctaggag aagctattga atgtaattga tgaatcgtaa
      721 ttcatagttg aagttcatat ttgatttgaa atctgtttcg catttatgtc catgtctaat
      781 ttacgacaat taaagctatt actttatgtt tttgctattt ttctttcaat ttcaagatac
      841 acaaacatca tggtctattg actatttgct cagtggcagt aacatttttt aacagatttt
      901 gtatgtttcc ttcattgatt aatgcaattg tagatagaca gatattgata aacactccct
      961 tacaatttca agtgtttagg aaaaatgttt tatgcccttc gtttatttgt agtttgtttg
     1021 agatttatga aacatgaaca aattatcctt acagttaatt gccttattaa cagatatcga
     1081 gaaaatataa tttatggcct ctgtttgttt gtagtttttt ttaaatacca atattgaggg
     1141 cagactctga aaatagataa acagcgcgtt aggtggtaca acacgtgcac aacttgcaat
     1201 gaagagttag aagacattcg aactgggctt ggctgcacca atcacaatct acaacccgac
     1261 aatcacagac tgtttcaggc tcatcttgac gacttgacag acaacataac agaggcttcg
     1321 ttcatatttt ttggagatgc aggaagagaa ctcatcgctc aaccatgcta aacacttatt
     1381 tcacaaatca aaccctacaa ttgcaaagaa cttccagaag ccatgaaagc cttgcaagga
     1441 actacacata atttccaatt ccagtacaat tcttcatacc caattaaacc acaaaaaatt
     1501 catcgccaaa catgtctttg caatatctac aacttccact gaaaaccaag gctccaacaa
     1561 acactattga tttacacact gaatagtgtt cacagttctt gattataata tttgttttca
     1621 gaaattttga aggttcttat ggaagcacaa tctgagcttt caatggaatt tgatcaaaca
     1681 aacactattg ctttacacac ggcttctaaa caagcccata ttgaggtggt gaagtttctt
     1741 ttggagaaaa atagtaaatt gggaactatt gcaaaaagca accttattac ccctttacat
     1801 tcgtgcgcat gaaaggttca tttggatgta atgaaagcac ttttagaaaa agtaccggaa
     1861 attgctacaa gagctgataa aaaaggtcaa accgctcttc atattgttgc taagggacaa
     1921 agagttgaca ttattaacga gcttatagta gcggataatg tgttgtttaa tatggttgat
     1981 aaaaagaaca ttgcatttca tatagctaca cgaaagcgtc aaaaagagag gagctatgca
     2041 tttgagaggt cttattacca cgtgagaaag ttatgtaata aaaatcagtt atccatttaa
     2101 ggacccacca ctttcttcag atctaaaagg agagaccttt tgcgctctgc tcggaacaca
     2161 caacatgtaa tattgaagct tcgaaccgca tcttggcgag gcaacactcg gatggcataa
     2221 atttgtgcaa ctgtatgtgt ttgcagccat ggcaggattt ggatcttctt ttatcccaat
     2281 ccttctattc catatctgag cgtggttttt ttgttgtaaa attagagttt aaaatctaat
     2341 ttaaagtctg ggattttcat ataacttttc gattatccgt atattgtatg tattttttaa
     2401 ttgatggata ataagatttg gtttgagttt ctaattttcg gagcctctga gtcgataaaa
     2461 ctcgatatat ggttgtattt tcgttatttg gatctttttg ttgtgacatt tattttaagt
     2521 aaggtggcga ggacatcaat tgctcaggta ctgactgtga tttcacaaac tcagaagttt
     2581 gctcttaggg aagcatcaag aacaagaagt gtctgcctct tgatttgcgc cctaagaaaa
     2641 ccaaagctat tcgaagacgt cttacagagc atcaagtacc attaatcaac atttgcttta
     2701 atagtgattt cgtgtgttgg gtaggttttt taaattttca ctacgagtct gtaacatttt
     2761 ttttttttta agataggaga ttaggagtta gctagggaaa gacgagaatc agcttaacgt
     2821 agactcttcc tcttttgctg cctatttgta ctttgtttga attgccttgt gaagcatatg
     2881 gcctccattt cgtagagctc gggatggaaa aaccaataga aatgactata cgatttcggt
     2941 acctttatca ggtttcatta aagaccgaaa gggaaaagaa ggagaagtac ttgaggaagt
     3001 atgttatcac taggtcaact tctctagaat catcagtaag ttgtatctta tttttcgtgt
     3061 acgtttattt caaaatatta tttgcaactt gcttaattat atgcattttt acagtcaagt
     3121 gtagatattc gttgataata taaggatttt ggtactaaag gctattggtc taggttgaac
     3181 catgtaacca ttaggttgtg tgtgaaagtt tttctgactt tttataaccc tccacaagta
     3241 cctgaagatg agaatgatat tgatgaagag caggtaagat cttaccttta atgtatatat
     3301 ttatggttgt cgatgatagg ttgtaaggtc gactccgttc acttatgaat agctcagttt
     3361 gtattatatt ttattttaat aggttgttcg aggggaattt aaa
//
LOCUS       XM_071829559            3328 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839486), transcript variant X10, mRNA.
ACCESSION   XM_071829559
VERSION     XM_071829559.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3328
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3328
                     /gene="LOC139839486"
                     /note="uncharacterized LOC139839486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839486"
     CDS             1829..2095
                     /gene="LOC139839486"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071685660.1"
                     /db_xref="GeneID:139839486"
                     /translation="MKALLEKVPEIATRADKKGQTALHIVAKGQRVDIINELIVADNV
                     LFNMVDKKNIAFHIATRKRQKEDPPLSSDLKGETFCALLGTHNM"
     misc_feature    1829..2026
                     /gene="LOC139839486"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    1880..1978
                     /gene="LOC139839486"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 ctatctaccc tctttcttgc tatatacctc caaatgtcta cattcagatg cttctaccac
       61 acccttcttc cttccccctt tctaccacca tcaccacaac ttgcttctac tctccacctc
      121 tactacctcc ttctccatca aatcccacac acaccaacct tctccgaaac caccaattta
      181 ataagtaagt tctatcgcct tccatttttc aagattgttt tttggcaatt tatttagggg
      241 tttatcacaa aattacacca acaattgaga atgattttcc cagtttgtaa cttttacgtc
      301 gtctccgtcg cttagctacc aggtatgatt ctattttatt atttattatt tagtgtcgag
      361 cagcgccgtt gtcaccatcg ccaccacttc cactcacccg atttctccac aagccgccgt
      421 aaaactagat tgtcggaaca aacgagttca aattactggt ccggaacgaa cgaacgaacg
      481 aacgagaacc tacggaatac acgaggaatt aagttttagg gcactctata tataaagatt
      541 agtatttttt taattttttt aaatttgttt ctgaagtatt attttttatc ttaaattata
      601 attcttgatt cgatgtactt ttgatctgtg gttgttagta cgaaatttca aggtcaacaa
      661 tcgattgctt tcaatgttgc tctaggagaa gctattgaat gtaattgatg aatcgtaatt
      721 catagttgaa gttcatattt gatttgaaat ctgtttcgca tttatgtcca tgtctaattt
      781 acgacaatta aagctattac tttatgtttt tgctattttt ctttcaattt caagatacac
      841 aaacatcatg gtctattgac tatttgctca gtggcagtaa cattttttaa cagattttgt
      901 atgtttcctt cattgattaa tgcaattgta gatagacaga tattgataaa cactccctta
      961 caatttcaag tgtttaggaa aaatgtttta tgcccttcgt ttatttgtag tttgtttgag
     1021 atttatgaaa catgaacaaa ttatccttac agttaattgc cttattaaca gatatcgaga
     1081 aaatataatt tatggcctct gtttgtttgt agtttttttt aaataccaat attgagggca
     1141 gactctgaaa atagataaac agcgcgttag gtggtacaac acgtgcacaa cttgcaatga
     1201 agagttagaa gacattcgaa ctgggcttgg ctgcaccaat cacaatctac aacccgacaa
     1261 tcacagactg tttcaggctc atcttgacga cttgacagac aacataacag aggcttcgtt
     1321 catatttttt ggagatgcag gaagagaact catcgctcaa ccatgctaaa cacttatttc
     1381 acaaatcaaa ccctacaatt gcaaagaact tccagaagcc atgaaagcct tgcaaggaac
     1441 tacacataat ttccaattcc agtacaattc ttcataccca attaaaccac aaaaaattca
     1501 tcgccaaaca tgtctttgca atatctacaa cttccactga aaaccaaggc tccaacaaac
     1561 actattgatt tacacactga atagtgttca cagttcttga ttataatatt tgttttcaga
     1621 aattttgaag gttcttatgg aagcacaatc tgagctttca atggaatttg atcaaacaaa
     1681 cactattgct ttacacacgg cttctaaaca agcccatatt gaggtggtga agtttctttt
     1741 ggagaaaaat agtaaattgg gaactattgc aaaaagcaac cttattaccc ctttacattc
     1801 gtgcgcatga aaggttcatt tggatgtaat gaaagcactt ttagaaaaag taccggaaat
     1861 tgctacaaga gctgataaaa aaggtcaaac cgctcttcat attgttgcta agggacaaag
     1921 agttgacatt attaacgagc ttatagtagc ggataatgtg ttgtttaata tggttgataa
     1981 aaagaacatt gcatttcata tagctacacg aaagcgtcaa aaagaggacc caccactttc
     2041 ttcagatcta aaaggagaga ccttttgcgc tctgctcgga acacacaaca tgtaatattg
     2101 aagcttcgaa ccgcatcttg gcgaggcaac actcggatgg cataaatttg tgcaactgta
     2161 tgtgtttgca gccatggcag gatttggatc ttcttttatc ccaatccttc tattccatat
     2221 ctgagcgtgg tttttttgtt gtaaaattag agtttaaaat ctaatttaaa gtctgggatt
     2281 ttcatataac ttttcgatta tccgtatatt gtatgtattt tttaattgat ggataataag
     2341 atttggtttg agtttctaat tttcggagcc tctgagtcga taaaactcga tatatggttg
     2401 tattttcgtt atttggatct ttttgttgtg acatttattt taagtaaggt ggcgaggaca
     2461 tcaattgctc aggtactgac tgtgatttca caaactcaga agtttgctct tagggaagca
     2521 tcaagaacaa gaagtgtctg cctcttgatt tgcgccctaa gaaaaccaaa gctattcgaa
     2581 gacgtcttac agagcatcaa gtaccattaa tcaacatttg ctttaatagt gatttcgtgt
     2641 gttgggtagg ttttttaaat tttcactacg agtctgtaac attttttttt ttttaagata
     2701 ggagattagg agttagctag ggaaagacga gaatcagctt aacgtagact cttcctcttt
     2761 tgctgcctat ttgtactttg tttgaattgc cttgtgaagc atatggcctc catttcgtag
     2821 agctcgggat ggaaaaacca atagaaatga ctatacgatt tcggtacctt tatcaggttt
     2881 cattaaagac cgaaagggaa aagaaggaga agtacttgag gaagtatgtt atcactaggt
     2941 caacttctct agaatcatca gtaagttgta tcttattttt cgtgtacgtt tatttcaaaa
     3001 tattatttgc aacttgctta attatatgca tttttacagt caagtgtaga tattcgttga
     3061 taatataagg attttggtac taaaggctat tggtctaggt tgaaccatgt aaccattagg
     3121 ttgtgtgtga aagtttttct gactttttat aaccctccac aagtacctga agatgagaat
     3181 gatattgatg aagagcaggt aagatcttac ctttaatgta tatatttatg gttgtcgatg
     3241 ataggttgta aggtcgactc cgttcactta tgaatagctc agtttgtatt atattttatt
     3301 ttaataggtt gttcgagggg aatttaaa
//
LOCUS       XM_071829560            1820 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable alpha-amylase 2
            (LOC139839487), transcript variant X1, mRNA.
ACCESSION   XM_071829560
VERSION     XM_071829560.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1820
                     /gene="LOC139839487"
                     /note="probable alpha-amylase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839487"
     CDS             137..1375
                     /gene="LOC139839487"
                     /codon_start=1
                     /product="probable alpha-amylase 2 isoform X1"
                     /protein_id="XP_071685661.1"
                     /db_xref="GeneID:139839487"
                     /translation="MGVIPIENDDGLHQTRIVIRNGREVLLQAFNWESHKHDWWRNLE
                     RKVPDMAKSGITSAWLPPATNSFAPEGYLPQNLYSLNTSYGSESSLKALLNKMKQYHI
                     RPMADIVINHRVGTTRGHGGMYNRYDGIALPWDERAVTSCTGGRGNRSTGDNFNGVPN
                     IDHTQDFVRKDIIGWLKWLRHTVGFQDFRFDFARGYSAKYVKEYIEGAKPIFSVGEYW
                     DSCNYNGSFLEYNQDSHRQRIINWIDATGQLSTAFDFTTKGILQEAVKGQLWRLRDAQ
                     GKPPGVIGWWPSRAVTFLDNHDTGSTQGHWPFPSNHIMEGYAYILTHPGIPSIFYDHL
                     YDWGTVIHDQIVNLIHIRKQQDINSRSSIRILQAESNLYAAIIGDKLCMKIGSGSWSP
                     TSAEWKLAAHGHQYAVWHKS"
     misc_feature    188..1369
                     /gene="LOC139839487"
                     /note="alpha-amylase; Region: PLN02361"
                     /db_xref="CDD:177990"
     polyA_site      1820
                     /gene="LOC139839487"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgcttcttat gcaacttgct tctgcattcc attttagtga ttgatttctt cgattgtatt
       61 caggatatgt cttcgtgctc aatcttaatt gatcaagcct taataaagtt attacagcac
      121 tcgtaagccg tatactatgg gtgtcatacc aatcgaaaat gatgatgggc tacatcaaac
      181 acgtatcgtg attcgcaatg gaagagaagt attgttacag gctttcaact gggagtcaca
      241 taaacatgac tggtggagaa atttggagag aaaagtacct gatatggcga aatccgggat
      301 cacgtcagca tggttaccgc ctgcaacaaa ttcatttgct cctgaaggct accttccaca
      361 gaacctgtat tctctcaaca catcatacgg gtctgagtct tcgcttaaag cattattaaa
      421 taaaatgaag cagtaccaca ttcgaccaat ggctgacata gtcattaatc accgtgtggg
      481 gaccacccga ggacatggtg gaatgtataa ccgttatgac gggattgcat taccatggga
      541 tgaacgtgct gttacatctt gtactggtgg acggggtaat cgtagcactg gagacaactt
      601 taatggggtt ccaaatattg atcatacaca agattttgtt cgaaaagata ttattggttg
      661 gcttaaatgg ctaagacaca ctgttggttt tcaggatttc cgttttgatt ttgcaagagg
      721 ttattctgca aaatatgtga aagaatacat cgagggcgca aaaccaatat tttctgttgg
      781 agaatactgg gactcgtgca actataatgg gtcgttcctg gaatacaacc aagatagtca
      841 taggcagcgt attatcaatt ggattgatgc tacggggcaa ctctctactg catttgactt
      901 cacaacaaaa ggaattcttc aggaagctgt taaggggcaa ctttggcgtt tgcgtgacgc
      961 acaaggaaag cctccaggag tgattggatg gtggccttct agagctgtaa cttttctcga
     1021 taatcatgac acgggatcaa ctcagggtca ttggccattt ccttctaacc atatcatgga
     1081 gggctatgct tacatcctta cgcatccagg gataccgtca atcttctatg accatttgta
     1141 tgactggggc actgtcattc atgaccaaat cgtgaacctg atccatattc gcaagcagca
     1201 agacatcaac agcagatcat ccattagaat acttcaagct gagtccaatc tttacgcagc
     1261 cataatcgga gataaactgt gcatgaaaat tggtagtggt tcatggagtc caacaagtgc
     1321 ggagtggaaa ttagcagccc acgggcacca gtatgcagtt tggcataaat catgatatat
     1381 gttgtattca cataaagttc cagcgctata gaatccaaga acagtgttaa tgagtcttca
     1441 ccttcacaaa tgatggttga taatgatggt ggttgtttat gtcatgtagc ttgctattcg
     1501 aataaagaca ttgtcaactc gactgataaa tcataatggc acgtccacct caatggataa
     1561 caacttatgg agagtgggtc gtttattgac tgaatataag tcattttaat gagatgaaag
     1621 attacatcct gatgatgttg tttccgattt tactcaattt ttgtttgagt tgtatgtctt
     1681 ctaaacagac ttctattaga caacccaggt tttaacgtaa aactcatgaa cccgtttcat
     1741 attttacaaa ggtggctatc tagacccatt tacagcaact gagttagctg cctctactat
     1801 cccttctatg tctaaatgta
//
LOCUS       XR_011756966            2023 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable alpha-amylase 2
            (LOC139839487), transcript variant X2, misc_RNA.
ACCESSION   XR_011756966
VERSION     XR_011756966.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2023
                     /gene="LOC139839487"
                     /note="probable alpha-amylase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839487"
     misc_RNA        1..2023
                     /gene="LOC139839487"
                     /product="probable alpha-amylase 2, transcript variant X2"
                     /db_xref="GeneID:139839487"
ORIGIN      
        1 cgcttcttat gcaacttgct tctgcattcc attttagtga ttgatttctt cgattgtatt
       61 caggatatgt cttcgtgctc aatcttaatt gatcaagcct taataaagtt attacagcac
      121 tcgtaagccg tatactatgg gtgtcatacc aatcgaaaat gatgatgggc tacatcaaac
      181 acgtatcgtg attcgcaatg gaagagaagt attgttacag gctttcaact gggagtcaca
      241 taaacatgac tggtggagaa atttggagag aaaagtacct gatatggcga aatccgggat
      301 cacgtcagca tggttaccgc ctgcaacaaa ttcatttgct cctgaaggct accttccaca
      361 gaacctgtat tctctcaaca catcatacgg gtctgagtct tcgcttaaag cattattaaa
      421 taaaatgaag cagtaccaca ttcgaccaat ggctgacata gtcattaatc accgtgtggg
      481 gaccacccga ggacatggtg gaatgtataa ccgttatgac gggattgcat taccatggga
      541 tgaacgtgct gttacatctt gtactggtgg acggggtaat cgtagcactg gagacaactt
      601 taatggggtt ccaaatattg atcatacaca agattttgtt cgaaaagata ttattggttg
      661 gcttaaatgg ctaagacaca ctgttggttt tcaggatttc cgttttgatt ttgcaagagg
      721 ttattctgca aaatatgtga aagaatacat cgagggcgca aaaccaatat tttctgttgg
      781 agaatactgg gactcgtgca actataatgg gtcgttcctg gaatacaacc aagatagtca
      841 taggcagcgt attatcaatt ggattgatgc tacggggcaa ctctctactg catttgactt
      901 cacaacaaaa ggaattcttc aggaagctgt taaggggcaa ctttggcgtt tgcgtgacgc
      961 acaaggaaag cctccaggag tgattggatg gtggccttct agagctgtaa cttttctcga
     1021 taatcatgac acgggatcaa ctcagggtca ttggccattt ccttctaacc atatcatgga
     1081 gggctatgct tacatcctta cgcatccagg gataccgtca atcttctatg accatttgta
     1141 tgactggggc actgtcattc atgaccaaat cgtgaacctg atccatattc gcaagcagca
     1201 agacatcaac agcagatcat ccattagaat acttcaagct gagtccaatc tttacgcagc
     1261 cataatcgga gataaactgt gcatgaaaat tggtagtggt tcatggagtc caacaagtgc
     1321 ggagtggaaa ttagcagccc acgggcacca gtatgcagtt tggcataaat catgatatat
     1381 gttgtattca cataaagttc cagcgctata gaatccaaga acagtgttaa tgagtcttca
     1441 ccttcacaaa tgatggttga taatgatggt ggttgtttat gtcatgtagc ttgctattcg
     1501 aataaagaca ttgtcaactc gactgataaa tcataatggc acgtccacct caatggataa
     1561 caacttatgg agagtaaaga aaatgaggaa ctggctgcaa ctttaagacc tgaaggtgag
     1621 gttagctttt atcagaggtc gagcctataa aatggccgac tttagtcttg atctagatga
     1681 tgccgacttg ctgagatagt gacccatcat tgggtaactg ataaattcat tattcattcc
     1741 gaaattgttt tggtggttca gcacttcagc agttgtatca tctaatgtta caaatgatgt
     1801 attgaatgat gaagcctgaa ggtattacat catattatca tgacctagga gactgcggta
     1861 acatttgtgg acatttaatt gctatatttt ggtatgaaga acgtgtcaat ccgtgttcaa
     1921 gagaacgtaa tactccgtat ttggtatcat caatgttttg agggtggtcg tgtttatctt
     1981 ccgacataga caaatcctcc tgaatcatat atgcatccag cag
//
LOCUS       XR_011756967            1988 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable alpha-amylase 2
            (LOC139839487), transcript variant X3, misc_RNA.
ACCESSION   XR_011756967
VERSION     XR_011756967.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1988
                     /gene="LOC139839487"
                     /note="probable alpha-amylase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839487"
     misc_RNA        1..1988
                     /gene="LOC139839487"
                     /product="probable alpha-amylase 2, transcript variant X3"
                     /db_xref="GeneID:139839487"
ORIGIN      
        1 cgcttcttat gcaacttgct tctgcattcc attttagtga ttgatttctt cgattgtatt
       61 caggatatgt cttcgtgctc aatcttaatt gatcaagcct taataaagtt attacagcac
      121 tcgtaagccg tatactatgg gtgtcatacc aatcgaaaat gatgatgggc tacatcaaac
      181 acgtatcgtg attcgcaatg gaagagaagt attgttacag gctttcaact gggagtcaca
      241 taaacatgac tggtggagaa atttggagag aaaagtacct gatatggcga aatccgggat
      301 cacgtcagca tggttaccgc ctgcaacaaa ttcatttgct cctgaaggct accttccaca
      361 gaacctgtat tctctcaaca catcatacgg gtctgagtct tcgcttaaag cattattaaa
      421 taaaatgaag cagtaccaca ttcgaccaat ggctgacata gtcattaatc accgtgtggg
      481 gaccacccga ggacatggtg gaatgtataa ccgttatgac gggattgcat taccatggga
      541 tgaacgtgct gttacatctt gtactggtgg acggggtaat cgtagcactg gagacaactt
      601 taatggggtt ccaaatattg atcatacaca agattttgtt cgaaaagata ttattggttg
      661 gcttaaatgg ctaagacaca ctgttggttt tcaggatttc cgttttgatt ttgcaagagg
      721 ttattctgca aaatatgtga aagaatacat cgagggcgca aaaccaatat tttctgttgg
      781 agaatactgg gactcgtgca actataatgg gtcgttcctg gaatacaacc aagatagtca
      841 taggcagcgt attatcaatt ggattgatgc tacggggcaa ctctctactg catttgactt
      901 cacaacaaaa ggaattcttc aggaagctgt taaggggcaa ctttggcgtt tgcgtgacgc
      961 acaaggaaag cctccaggag tgattggatg gtggccttct agagctgtaa cttttctcga
     1021 taatcatgac acgggatcaa ctcagggtca ttggccattt ccttctaacc atatcatgga
     1081 gggctatgct tacatcctta cgcatccagg gataccgtca atcttctatg accatttgta
     1141 tgactggggc actgtcattc atgaccaaat cgtgaacctg atccatattc gcaagcagca
     1201 agacatcaac agcagatcat ccattagaat acttcaagct gagtccaatc tttacgcagc
     1261 cataatcgga gataaactgt gcatgaaaat tggtagtggt tcatggagtc caacaagtgc
     1321 ggagtggaaa ttagcagccc acgggcacca gtatgcagtt tggcataaat catgatatat
     1381 gttgtattca cataaagttc cagcgctata gaatccaaga acagtgttaa tgagtcttca
     1441 ccttcacaaa tgatggttga taatgatggt ggttgtttat gtcatgtagc ttgctattcg
     1501 aataaagaca ttgtcaactc gactgataaa tcataatggt aaagaaaatg aggaactggc
     1561 tgcaacttta agacctgaag gtgaggttag cttttatcag aggtcgagcc tataaaatgg
     1621 ccgactttag tcttgatcta gatgatgccg acttgctgag atagtgaccc atcattgggt
     1681 aactgataaa ttcattattc attccgaaat tgttttggtg gttcagcact tcagcagttg
     1741 tatcatctaa tgttacaaat gatgtattga atgatgaagc ctgaaggtat tacatcatat
     1801 tatcatgacc taggagactg cggtaacatt tgtggacatt taattgctat attttggtat
     1861 gaagaacgtg tcaatccgtg ttcaagagaa cgtaatactc cgtatttggt atcatcaatg
     1921 ttttgagggt ggtcgtgttt atcttccgac atagacaaat cctcctgaat catatatgca
     1981 tccagcag
//
LOCUS       XM_071829561            1632 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable alpha-amylase 2
            (LOC139839487), transcript variant X4, mRNA.
ACCESSION   XM_071829561
VERSION     XM_071829561.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1632
                     /gene="LOC139839487"
                     /note="probable alpha-amylase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139839487"
     CDS             137..1372
                     /gene="LOC139839487"
                     /codon_start=1
                     /product="probable alpha-amylase 2 isoform X2"
                     /protein_id="XP_071685662.1"
                     /db_xref="GeneID:139839487"
                     /translation="MGVIPIENDDGLHQTRIVIRNGREVLLQAFNWESHKHDWWRNLE
                     RKVPDMAKSGITSAWLPPATNSFAPEGYLPQNLYSLNTSYGSESSLKALLNKMKQYHI
                     RPMADIVINHRVGTTRGHGGMYNRYDGIALPWDERAVTSCTGGRGNRSTGDNFNGVPN
                     IDHTQDFVRKDIIGWLKWLRHTVGFQDFRFDFARGYSAKYVKEYIEGAKPIFSVGEYW
                     DSCNYNGSFLEYNQDSHRQRIINWIDATGQLSTAFDFTTKGILQEAVKGQLWRLRDAQ
                     GKPPGVIGWWPSRAVTFLDNHDTGSTQGHWPFPSNHIMEGYAYILTHPGIPSIFYDHL
                     YDWGTVIHDQIVNLIHIRKQQDINSRSSIRILQAESNLYAAIIGDKLCMKIGSGSWSP
                     TSAEWKLAAHGHQYAVWHK"
     misc_feature    188..1369
                     /gene="LOC139839487"
                     /note="alpha-amylase; Region: PLN02361"
                     /db_xref="CDD:177990"
ORIGIN      
        1 cgcttcttat gcaacttgct tctgcattcc attttagtga ttgatttctt cgattgtatt
       61 caggatatgt cttcgtgctc aatcttaatt gatcaagcct taataaagtt attacagcac
      121 tcgtaagccg tatactatgg gtgtcatacc aatcgaaaat gatgatgggc tacatcaaac
      181 acgtatcgtg attcgcaatg gaagagaagt attgttacag gctttcaact gggagtcaca
      241 taaacatgac tggtggagaa atttggagag aaaagtacct gatatggcga aatccgggat
      301 cacgtcagca tggttaccgc ctgcaacaaa ttcatttgct cctgaaggct accttccaca
      361 gaacctgtat tctctcaaca catcatacgg gtctgagtct tcgcttaaag cattattaaa
      421 taaaatgaag cagtaccaca ttcgaccaat ggctgacata gtcattaatc accgtgtggg
      481 gaccacccga ggacatggtg gaatgtataa ccgttatgac gggattgcat taccatggga
      541 tgaacgtgct gttacatctt gtactggtgg acggggtaat cgtagcactg gagacaactt
      601 taatggggtt ccaaatattg atcatacaca agattttgtt cgaaaagata ttattggttg
      661 gcttaaatgg ctaagacaca ctgttggttt tcaggatttc cgttttgatt ttgcaagagg
      721 ttattctgca aaatatgtga aagaatacat cgagggcgca aaaccaatat tttctgttgg
      781 agaatactgg gactcgtgca actataatgg gtcgttcctg gaatacaacc aagatagtca
      841 taggcagcgt attatcaatt ggattgatgc tacggggcaa ctctctactg catttgactt
      901 cacaacaaaa ggaattcttc aggaagctgt taaggggcaa ctttggcgtt tgcgtgacgc
      961 acaaggaaag cctccaggag tgattggatg gtggccttct agagctgtaa cttttctcga
     1021 taatcatgac acgggatcaa ctcagggtca ttggccattt ccttctaacc atatcatgga
     1081 gggctatgct tacatcctta cgcatccagg gataccgtca atcttctatg accatttgta
     1141 tgactggggc actgtcattc atgaccaaat cgtgaacctg atccatattc gcaagcagca
     1201 agacatcaac agcagatcat ccattagaat acttcaagct gagtccaatc tttacgcagc
     1261 cataatcgga gataaactgt gcatgaaaat tggtagtggt tcatggagtc caacaagtgc
     1321 ggagtggaaa ttagcagccc acgggcacca gtatgcagtt tggcataagt aagcttaaca
     1381 agactcatag ttcttttcaa taagatacat aagttcacaa gattcttgat aaactcctat
     1441 acgtacgtgt tacagaataa agtagttagt caaacaatat gtattgtaat gtaatcataa
     1501 tcagttgttc cggcattaat atgcgggaac atttacattg gcgcatatcc catttcaaaa
     1561 gaagtgtaaa atagaatata catcaataaa ggttctaccg atagaagctt tttccagatt
     1621 tttattttcg tg
//
LOCUS       XM_071829562             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dehydration-responsive
            element-binding protein 3-like (LOC139839488), mRNA.
ACCESSION   XM_071829562
VERSION     XM_071829562.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139839488"
                     /note="dehydration-responsive element-binding protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139839488"
     CDS             1..660
                     /gene="LOC139839488"
                     /codon_start=1
                     /product="dehydration-responsive element-binding protein
                     3-like"
                     /protein_id="XP_071685663.1"
                     /db_xref="GeneID:139839488"
                     /translation="MAGNTLHHWITKTRNKEITKDEDVEIASRTKQNITKSKLKKRNR
                     KDVSYKHPVFRGVRMRSWGKWVSEIRQPRKKSRIWLGTFSTAEMAARAHDVAALSIKG
                     NSAVLNFPVLKDTLPRPVSLSRRDVQEAAAKAATMQMAAAPLQPPGVVDLKTTEELGE
                     IIELPNLEGCLDSPKSSTELVMVDSVDLWVYPSWSMAGINCFLDYISDPVADNAFLWD
                     C"
     misc_feature    160..339
                     /gene="LOC139839488"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(163..168,172..174,178..180,184..186,190..192,
                     202..204,208..210,229..231,235..237,244..246)
                     /gene="LOC139839488"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
ORIGIN      
        1 atggcaggaa ataccctaca ccattggatt acaaaaacac gaaataaaga aatcacgaaa
       61 gatgaggatg tagagattgc atcacgtaca aaacaaaata ttacaaaatc taaacttaaa
      121 aagagaaatc gaaaagatgt aagttacaaa catcctgttt ttcgaggagt tcgaatgaga
      181 agttggggga aatgggtgtc tgaaatccga caacctagga aaaaatcccg catttggcta
      241 ggaacatttt caacagccga gatggcagct agggctcatg atgttgctgc cttgtcgatc
      301 aaaggtaatt ctgctgtcct taattttccc gtgctcaaag acacgttacc tcgtccggtg
      361 tccctttctc gacgtgatgt acaagaagcc gccgcgaaag cagccaccat gcaaatggcg
      421 gctgcgccat tacaaccacc aggggttgtt gatttaaaaa cgacagaaga actcggtgag
      481 atcattgagt taccgaattt agaaggatgt ttggactcac ccaagtcatc cactgagtta
      541 gtgatggttg actcagtgga tctgtgggtg tatccgtcat ggtcaatggc gggtatcaat
      601 tgttttcttg attatatctc cgatccagtg gcggataatg ctttcttgtg ggattgctaa
//
LOCUS       XM_071829563             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dehydration-responsive
            element-binding protein 3-like (LOC139839489), mRNA.
ACCESSION   XM_071829563
VERSION     XM_071829563.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139839489"
                     /note="dehydration-responsive element-binding protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139839489"
     CDS             1..462
                     /gene="LOC139839489"
                     /codon_start=1
                     /product="dehydration-responsive element-binding protein
                     3-like"
                     /protein_id="XP_071685664.1"
                     /db_xref="GeneID:139839489"
                     /translation="MAGNTLHYWITKTRNKGITKDEDVEIASRTKQNITSNSAVLNFP
                     ELKDTLPRPVSLSRRDVQEAAAKAATMQMAAAPLQPPGVVDLKTTEELGEIIELPNLE
                     GCLDSPKSSTELVMVDSVDLWVYPSWSMAGIDCFLDYISDPVADNAFLWDC"
ORIGIN      
        1 atggcaggaa ataccctaca ctattggatt acaaaaacac gaaataaagg aatcacgaaa
       61 gatgaggatg tagagattgc atcacgtaca aaacaaaata ttacaagtaa ttctgctgtc
      121 cttaattttc ccgagctcaa agacacgtta cctcgtccgg tgtccctttc tcgacgtgat
      181 gtacaagaag ccgccgcgaa agcagccacc atgcaaatgg cggctgcgcc attacaacca
      241 ccaggggttg ttgatttaaa aacgacagaa gaactcggtg agatcattga gttaccgaat
      301 ttagaaggat gtttggactc acccaagtca tccactgagt tagtgatggt tgactcagtg
      361 gatctgtggg tgtatccgtc atggtcaatg gcgggtatcg attgttttct tgattatatc
      421 tccgatccag tggcggataa tgctttcttg tgggattgct aa
//
LOCUS       XR_011756968             307 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839490), ncRNA.
ACCESSION   XR_011756968
VERSION     XR_011756968.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..307
                     /gene="LOC139839490"
                     /note="uncharacterized LOC139839490; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839490"
     ncRNA           1..307
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839490"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839490"
ORIGIN      
        1 tgtcaaatat gttttagggt ttataattgg attattactc ttatcaaccg acgaattccg
       61 attctccgat caacgattga atgacgccac cgcccggccc ttactccggt accagcacgc
      121 tagctttggt ggctcgtgtg accgccttct ctgctggact actctatgga aacatgaagc
      181 tcaaatacct taaggcaaaa gcgaagtcac aaagaaaagc tgaagccaag gcacaacact
      241 agaagtagca gtagaatgtt taaaaataat tcttgagtat atcttgctcg gatctttcac
      301 ttgaaag
//
LOCUS       XM_071829564            1662 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ GFA2,
            mitochondrial-like (LOC139839491), transcript variant X1, mRNA.
ACCESSION   XM_071829564
VERSION     XM_071829564.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1662
                     /gene="LOC139839491"
                     /note="chaperone protein dnaJ GFA2, mitochondrial-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839491"
     CDS             193..1545
                     /gene="LOC139839491"
                     /codon_start=1
                     /product="chaperone protein dnaJ GFA2, mitochondrial-like
                     isoform X1"
                     /protein_id="XP_071685665.1"
                     /db_xref="GeneID:139839491"
                     /translation="MVGYNGIKLLSWISRRTFSNDSTLYESLVKGGYRKFGTSIHTYY
                     YIIPNSQLVNSRYRANCLKVNACFGNTRSIHGTSYMAAKDYYDTLKVNKNVSASEIKK
                     AYYMLAKKWHPDVNKKDPEAAETMFKEISKAYEVLKDEKKRAEYDQNYGFGGQLGCDS
                     GGKDVKVSVDISFMEAVQGCTRKVVFQTELTCQSCDGTGIFVFGRTCNTCNGQKVGRG
                     SKSVKVNIMPGVDTNEELKISRSGGADPDGKQPGDLYVVIKVRDHSVFRRQGPDIHVD
                     AVVSKTQLRFGGTIQVSTLTGDVLLKVPPRTLPGQKVVMKGKGIKNRSSNSYGDQYVH
                     FIIPTLNELNELIKKSEKRLNEVNKELEDLECAGDLVNGRSMSSKSKVQKRICSRSGK
                     LKRLNELNELIKDLQCTIDQSKVPSGKILRCGKCGDYGHNQRTCRREDKGTKKKKKKK
                     "
     misc_feature    442..1239
                     /gene="LOC139839491"
                     /note="chaperone protein DnaJ; Region: DnaJ_bact;
                     TIGR02349"
                     /db_xref="CDD:274090"
     misc_feature    <1216..>1413
                     /gene="LOC139839491"
                     /note="DNA double-strand break repair ATPase Rad50;
                     Region: PRK03918"
                     /db_xref="CDD:235175"
ORIGIN      
        1 cgtgataaaa aaagtaagga aagcgtgttt gattttgatt tccttccaaa tccacaatgt
       61 cagggttttt agggtttact gaaaatcccc tttttaacac tcatcgatac ctaaaatttc
      121 agttttgttt taccactaat ttaatactga ttacaaatac aaatacaaat acaaatacaa
      181 atacaaatac aaatggttgg ttataacggc attaaactcc tgtcatggat ttctcgacga
      241 accttctcca acgattccac cttgtatgaa tcgctggtta aaggaggtta tagaaagttt
      301 ggtacatcca ttcatactta ttactacatc attcctaact ctcaattagt taattcgaga
      361 tatcgggcaa attgtctaaa ggtgaatgcg tgttttggaa atactagatc gattcatggc
      421 acttcataca tggctgcaaa agattattat gatacactca aagtcaataa gaatgtgtct
      481 gcttcagaaa tcaagaaagc ctattacatg ttagcaaaga agtggcatcc agatgtaaat
      541 aaaaaagacc cagaagcagc tgaaacaatg tttaaggaaa tttcaaaggc atatgaggtt
      601 ctgaaagatg agaagaaacg agcagaatat gaccagaatt atggttttgg cgggcaactt
      661 ggttgtgatt ccggtggcaa ggacgttaag gtatccgttg atatttcctt tatggaagct
      721 gtgcagggat gcaccagaaa agtagtcttc cagaccgagt tgacttgtca atcttgtgat
      781 ggaactggta tatttgtctt tgggcgcaca tgcaatacat gcaatggcca gaaggtaggg
      841 agaggatcaa agtcggttaa agtaaatata atgccaggag tggatacaaa tgaagaatta
      901 aagatttcta gaagtggtgg ggcagatcca gatggtaagc agccaggtga tctttatgtt
      961 gtcatcaagg tgcgagatca ctctgttttt cgacgacaag gaccagatat tcatgttgat
     1021 gcagttgtga gtaagactca gttaaggttt ggagggacta tacaagtctc aacattgacg
     1081 ggtgacgttc ttcttaaggt tcctccaaga accctacctg gtcaaaaagt agtaatgaag
     1141 ggaaaaggaa tcaaaaatag aagctctaac tcatatggag atcagtacgt gcacttcatc
     1201 atcccaacgt taaatgaact aaatgaactg attaaaaagt cggaaaaacg gttaaatgaa
     1261 gtgaataaag agttggaaga cctagaatgc gccggtgatc tggtgaacgg aagatcaatg
     1321 tcgtccaaat caaaggtcca aaaacgtata tgttcgcgtt ctggtaaatt gaagaggtta
     1381 aatgaactta atgaactgat taaagaccta caatgcacca ttgatcagtc aaaggtcccc
     1441 agcggtaaaa ttctgcgttg cggtaaatgt ggagactatg gccataatca aaggacgtgt
     1501 agacgtgaag acaaaggaac caagaagaag aaaaagaaaa aatgaagcag caaattaagt
     1561 tgtgtcctgt gtcttttggc tcaacataac cacttgtcta tttatgtgtc tgtgtacttg
     1621 tgtcttttgg ttaacataac cacttagcat aaatacccga aa
//
LOCUS       XM_071829565            1617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ GFA2,
            mitochondrial-like (LOC139839491), transcript variant X2, mRNA.
ACCESSION   XM_071829565
VERSION     XM_071829565.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1617
                     /gene="LOC139839491"
                     /note="chaperone protein dnaJ GFA2, mitochondrial-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839491"
     CDS             193..1500
                     /gene="LOC139839491"
                     /codon_start=1
                     /product="chaperone protein dnaJ GFA2, mitochondrial-like
                     isoform X2"
                     /protein_id="XP_071685666.1"
                     /db_xref="GeneID:139839491"
                     /translation="MVGYNGIKLLSWISRRTFSNDSTLYESLVKGGYRKFVVNSRYRA
                     NCLKVNACFGNTRSIHGTSYMAAKDYYDTLKVNKNVSASEIKKAYYMLAKKWHPDVNK
                     KDPEAAETMFKEISKAYEVLKDEKKRAEYDQNYGFGGQLGCDSGGKDVKVSVDISFME
                     AVQGCTRKVVFQTELTCQSCDGTGIFVFGRTCNTCNGQKVGRGSKSVKVNIMPGVDTN
                     EELKISRSGGADPDGKQPGDLYVVIKVRDHSVFRRQGPDIHVDAVVSKTQLRFGGTIQ
                     VSTLTGDVLLKVPPRTLPGQKVVMKGKGIKNRSSNSYGDQYVHFIIPTLNELNELIKK
                     SEKRLNEVNKELEDLECAGDLVNGRSMSSKSKVQKRICSRSGKLKRLNELNELIKDLQ
                     CTIDQSKVPSGKILRCGKCGDYGHNQRTCRREDKGTKKKKKKK"
     misc_feature    397..1194
                     /gene="LOC139839491"
                     /note="chaperone protein DnaJ; Region: DnaJ_bact;
                     TIGR02349"
                     /db_xref="CDD:274090"
     misc_feature    <1171..>1368
                     /gene="LOC139839491"
                     /note="DNA double-strand break repair ATPase Rad50;
                     Region: PRK03918"
                     /db_xref="CDD:235175"
ORIGIN      
        1 cgtgataaaa aaagtaagga aagcgtgttt gattttgatt tccttccaaa tccacaatgt
       61 cagggttttt agggtttact gaaaatcccc tttttaacac tcatcgatac ctaaaatttc
      121 agttttgttt taccactaat ttaatactga ttacaaatac aaatacaaat acaaatacaa
      181 atacaaatac aaatggttgg ttataacggc attaaactcc tgtcatggat ttctcgacga
      241 accttctcca acgattccac cttgtatgaa tcgctggtta aaggaggtta tagaaagttt
      301 gtagttaatt cgagatatcg ggcaaattgt ctaaaggtga atgcgtgttt tggaaatact
      361 agatcgattc atggcacttc atacatggct gcaaaagatt attatgatac actcaaagtc
      421 aataagaatg tgtctgcttc agaaatcaag aaagcctatt acatgttagc aaagaagtgg
      481 catccagatg taaataaaaa agacccagaa gcagctgaaa caatgtttaa ggaaatttca
      541 aaggcatatg aggttctgaa agatgagaag aaacgagcag aatatgacca gaattatggt
      601 tttggcgggc aacttggttg tgattccggt ggcaaggacg ttaaggtatc cgttgatatt
      661 tcctttatgg aagctgtgca gggatgcacc agaaaagtag tcttccagac cgagttgact
      721 tgtcaatctt gtgatggaac tggtatattt gtctttgggc gcacatgcaa tacatgcaat
      781 ggccagaagg tagggagagg atcaaagtcg gttaaagtaa atataatgcc aggagtggat
      841 acaaatgaag aattaaagat ttctagaagt ggtggggcag atccagatgg taagcagcca
      901 ggtgatcttt atgttgtcat caaggtgcga gatcactctg tttttcgacg acaaggacca
      961 gatattcatg ttgatgcagt tgtgagtaag actcagttaa ggtttggagg gactatacaa
     1021 gtctcaacat tgacgggtga cgttcttctt aaggttcctc caagaaccct acctggtcaa
     1081 aaagtagtaa tgaagggaaa aggaatcaaa aatagaagct ctaactcata tggagatcag
     1141 tacgtgcact tcatcatccc aacgttaaat gaactaaatg aactgattaa aaagtcggaa
     1201 aaacggttaa atgaagtgaa taaagagttg gaagacctag aatgcgccgg tgatctggtg
     1261 aacggaagat caatgtcgtc caaatcaaag gtccaaaaac gtatatgttc gcgttctggt
     1321 aaattgaaga ggttaaatga acttaatgaa ctgattaaag acctacaatg caccattgat
     1381 cagtcaaagg tccccagcgg taaaattctg cgttgcggta aatgtggaga ctatggccat
     1441 aatcaaagga cgtgtagacg tgaagacaaa ggaaccaaga agaagaaaaa gaaaaaatga
     1501 agcagcaaat taagttgtgt cctgtgtctt ttggctcaac ataaccactt gtctatttat
     1561 gtgtctgtgt acttgtgtct tttggttaac ataaccactt agcataaata cccgaaa
//
LOCUS       XM_071829566            1614 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ GFA2,
            mitochondrial-like (LOC139839491), transcript variant X3, mRNA.
ACCESSION   XM_071829566
VERSION     XM_071829566.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1614
                     /gene="LOC139839491"
                     /note="chaperone protein dnaJ GFA2, mitochondrial-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839491"
     CDS             193..1497
                     /gene="LOC139839491"
                     /codon_start=1
                     /product="chaperone protein dnaJ GFA2, mitochondrial-like
                     isoform X3"
                     /protein_id="XP_071685667.1"
                     /db_xref="GeneID:139839491"
                     /translation="MVGYNGIKLLSWISRRTFSNDSTLYESLVKGGYRKFVNSRYRAN
                     CLKVNACFGNTRSIHGTSYMAAKDYYDTLKVNKNVSASEIKKAYYMLAKKWHPDVNKK
                     DPEAAETMFKEISKAYEVLKDEKKRAEYDQNYGFGGQLGCDSGGKDVKVSVDISFMEA
                     VQGCTRKVVFQTELTCQSCDGTGIFVFGRTCNTCNGQKVGRGSKSVKVNIMPGVDTNE
                     ELKISRSGGADPDGKQPGDLYVVIKVRDHSVFRRQGPDIHVDAVVSKTQLRFGGTIQV
                     STLTGDVLLKVPPRTLPGQKVVMKGKGIKNRSSNSYGDQYVHFIIPTLNELNELIKKS
                     EKRLNEVNKELEDLECAGDLVNGRSMSSKSKVQKRICSRSGKLKRLNELNELIKDLQC
                     TIDQSKVPSGKILRCGKCGDYGHNQRTCRREDKGTKKKKKKK"
     misc_feature    394..1191
                     /gene="LOC139839491"
                     /note="chaperone protein DnaJ; Region: DnaJ_bact;
                     TIGR02349"
                     /db_xref="CDD:274090"
     misc_feature    <1168..>1365
                     /gene="LOC139839491"
                     /note="DNA double-strand break repair ATPase Rad50;
                     Region: PRK03918"
                     /db_xref="CDD:235175"
ORIGIN      
        1 cgtgataaaa aaagtaagga aagcgtgttt gattttgatt tccttccaaa tccacaatgt
       61 cagggttttt agggtttact gaaaatcccc tttttaacac tcatcgatac ctaaaatttc
      121 agttttgttt taccactaat ttaatactga ttacaaatac aaatacaaat acaaatacaa
      181 atacaaatac aaatggttgg ttataacggc attaaactcc tgtcatggat ttctcgacga
      241 accttctcca acgattccac cttgtatgaa tcgctggtta aaggaggtta tagaaagttt
      301 gttaattcga gatatcgggc aaattgtcta aaggtgaatg cgtgttttgg aaatactaga
      361 tcgattcatg gcacttcata catggctgca aaagattatt atgatacact caaagtcaat
      421 aagaatgtgt ctgcttcaga aatcaagaaa gcctattaca tgttagcaaa gaagtggcat
      481 ccagatgtaa ataaaaaaga cccagaagca gctgaaacaa tgtttaagga aatttcaaag
      541 gcatatgagg ttctgaaaga tgagaagaaa cgagcagaat atgaccagaa ttatggtttt
      601 ggcgggcaac ttggttgtga ttccggtggc aaggacgtta aggtatccgt tgatatttcc
      661 tttatggaag ctgtgcaggg atgcaccaga aaagtagtct tccagaccga gttgacttgt
      721 caatcttgtg atggaactgg tatatttgtc tttgggcgca catgcaatac atgcaatggc
      781 cagaaggtag ggagaggatc aaagtcggtt aaagtaaata taatgccagg agtggataca
      841 aatgaagaat taaagatttc tagaagtggt ggggcagatc cagatggtaa gcagccaggt
      901 gatctttatg ttgtcatcaa ggtgcgagat cactctgttt ttcgacgaca aggaccagat
      961 attcatgttg atgcagttgt gagtaagact cagttaaggt ttggagggac tatacaagtc
     1021 tcaacattga cgggtgacgt tcttcttaag gttcctccaa gaaccctacc tggtcaaaaa
     1081 gtagtaatga agggaaaagg aatcaaaaat agaagctcta actcatatgg agatcagtac
     1141 gtgcacttca tcatcccaac gttaaatgaa ctaaatgaac tgattaaaaa gtcggaaaaa
     1201 cggttaaatg aagtgaataa agagttggaa gacctagaat gcgccggtga tctggtgaac
     1261 ggaagatcaa tgtcgtccaa atcaaaggtc caaaaacgta tatgttcgcg ttctggtaaa
     1321 ttgaagaggt taaatgaact taatgaactg attaaagacc tacaatgcac cattgatcag
     1381 tcaaaggtcc ccagcggtaa aattctgcgt tgcggtaaat gtggagacta tggccataat
     1441 caaaggacgt gtagacgtga agacaaagga accaagaaga agaaaaagaa aaaatgaagc
     1501 agcaaattaa gttgtgtcct gtgtcttttg gctcaacata accacttgtc tatttatgtg
     1561 tctgtgtact tgtgtctttt ggttaacata accacttagc ataaataccc gaaa
//
LOCUS       XM_071829567            1328 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ GFA2,
            mitochondrial-like (LOC139839491), transcript variant X4, mRNA.
ACCESSION   XM_071829567
VERSION     XM_071829567.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1328
                     /gene="LOC139839491"
                     /note="chaperone protein dnaJ GFA2, mitochondrial-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839491"
     CDS             96..1211
                     /gene="LOC139839491"
                     /codon_start=1
                     /product="chaperone protein dnaJ GFA2, mitochondrial-like
                     isoform X4"
                     /protein_id="XP_071685668.1"
                     /db_xref="GeneID:139839491"
                     /translation="MAAKDYYDTLKVNKNVSASEIKKAYYMLAKKWHPDVNKKDPEAA
                     ETMFKEISKAYEVLKDEKKRAEYDQNYGFGGQLGCDSGGKDVKVSVDISFMEAVQGCT
                     RKVVFQTELTCQSCDGTGIFVFGRTCNTCNGQKVGRGSKSVKVNIMPGVDTNEELKIS
                     RSGGADPDGKQPGDLYVVIKVRDHSVFRRQGPDIHVDAVVSKTQLRFGGTIQVSTLTG
                     DVLLKVPPRTLPGQKVVMKGKGIKNRSSNSYGDQYVHFIIPTLNELNELIKKSEKRLN
                     EVNKELEDLECAGDLVNGRSMSSKSKVQKRICSRSGKLKRLNELNELIKDLQCTIDQS
                     KVPSGKILRCGKCGDYGHNQRTCRREDKGTKKKKKKK"
     misc_feature    108..905
                     /gene="LOC139839491"
                     /note="chaperone protein DnaJ; Region: DnaJ_bact;
                     TIGR02349"
                     /db_xref="CDD:274090"
ORIGIN      
        1 tccaacgatt ccaccttgta tgaatcgctg gttaaaggag gttatagaaa gtttgtagtt
       61 aattcgagat atcgggcaaa ttgtctaaag catacatggc tgcaaaagat tattatgata
      121 cactcaaagt caataagaat gtgtctgctt cagaaatcaa gaaagcctat tacatgttag
      181 caaagaagtg gcatccagat gtaaataaaa aagacccaga agcagctgaa acaatgttta
      241 aggaaatttc aaaggcatat gaggttctga aagatgagaa gaaacgagca gaatatgacc
      301 agaattatgg ttttggcggg caacttggtt gtgattccgg tggcaaggac gttaaggtat
      361 ccgttgatat ttcctttatg gaagctgtgc agggatgcac cagaaaagta gtcttccaga
      421 ccgagttgac ttgtcaatct tgtgatggaa ctggtatatt tgtctttggg cgcacatgca
      481 atacatgcaa tggccagaag gtagggagag gatcaaagtc ggttaaagta aatataatgc
      541 caggagtgga tacaaatgaa gaattaaaga tttctagaag tggtggggca gatccagatg
      601 gtaagcagcc aggtgatctt tatgttgtca tcaaggtgcg agatcactct gtttttcgac
      661 gacaaggacc agatattcat gttgatgcag ttgtgagtaa gactcagtta aggtttggag
      721 ggactataca agtctcaaca ttgacgggtg acgttcttct taaggttcct ccaagaaccc
      781 tacctggtca aaaagtagta atgaagggaa aaggaatcaa aaatagaagc tctaactcat
      841 atggagatca gtacgtgcac ttcatcatcc caacgttaaa tgaactaaat gaactgatta
      901 aaaagtcgga aaaacggtta aatgaagtga ataaagagtt ggaagaccta gaatgcgccg
      961 gtgatctggt gaacggaaga tcaatgtcgt ccaaatcaaa ggtccaaaaa cgtatatgtt
     1021 cgcgttctgg taaattgaag aggttaaatg aacttaatga actgattaaa gacctacaat
     1081 gcaccattga tcagtcaaag gtccccagcg gtaaaattct gcgttgcggt aaatgtggag
     1141 actatggcca taatcaaagg acgtgtagac gtgaagacaa aggaaccaag aagaagaaaa
     1201 agaaaaaatg aagcagcaaa ttaagttgtg tcctgtgtct tttggctcaa cataaccact
     1261 tgtctattta tgtgtctgtg tacttgtgtc ttttggttaa cataaccact tagcataaat
     1321 acccgaaa
//
LOCUS       XM_071829568            2310 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ GFA2,
            mitochondrial-like (LOC139839491), transcript variant X5, mRNA.
ACCESSION   XM_071829568
VERSION     XM_071829568.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2310
                     /gene="LOC139839491"
                     /note="chaperone protein dnaJ GFA2, mitochondrial-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839491"
     CDS             193..1263
                     /gene="LOC139839491"
                     /codon_start=1
                     /product="chaperone protein dnaJ GFA2, mitochondrial-like
                     isoform X5"
                     /protein_id="XP_071685669.1"
                     /db_xref="GeneID:139839491"
                     /translation="MVGYNGIKLLSWISRRTFSNDSTLYESLVKGGYRKFGTSIHTYY
                     YIIPNSQLVNSRYRANCLKVNACFGNTRSIHGTSYMAAKDYYDTLKVNKNVSASEIKK
                     AYYMLAKKWHPDVNKKDPEAAETMFKEISKAYEVLKDEKKRAEYDQNYGFGGQLGCDS
                     GGKDVKVSVDISFMEAVQGCTRKVVFQTELTCQSCDGTGIFVFGRTCNTCNGQKVGRG
                     SKSVKVNIMPGVDTNEELKISRSGGADPDGKQPGDLYVVIKVRDHSVFRRQGPDIHVD
                     AVVSKTQLRFGGTIQVSTLTGDVLLKVPPRTLPGQKVVMKGKGIKTRSSNSYGDQYVH
                     FRMPTLDELIKELEQLAFQKKK"
     misc_feature    442..1245
                     /gene="LOC139839491"
                     /note="chaperone protein DnaJ; Region: DnaJ_bact;
                     TIGR02349"
                     /db_xref="CDD:274090"
ORIGIN      
        1 cgtgataaaa aaagtaagga aagcgtgttt gattttgatt tccttccaaa tccacaatgt
       61 cagggttttt agggtttact gaaaatcccc tttttaacac tcatcgatac ctaaaatttc
      121 agttttgttt taccactaat ttaatactga ttacaaatac aaatacaaat acaaatacaa
      181 atacaaatac aaatggttgg ttataacggc attaaactcc tgtcatggat ttctcgacga
      241 accttctcca acgattccac cttgtatgaa tcgctggtta aaggaggtta tagaaagttt
      301 ggtacatcca ttcatactta ttactacatc attcctaact ctcaattagt taattcgaga
      361 tatcgggcaa attgtctaaa ggtgaatgcg tgttttggaa atactagatc gattcatggc
      421 acttcataca tggctgcaaa agattattat gatacactca aagtcaataa gaatgtgtct
      481 gcttcagaaa tcaagaaagc ctattacatg ttagcaaaga agtggcatcc agatgtaaat
      541 aaaaaagacc cagaagcagc tgaaacaatg tttaaggaaa tttcaaaggc atatgaggtt
      601 ctgaaagatg agaagaaacg agcagaatat gaccagaatt atggttttgg cgggcaactt
      661 ggttgtgatt ccggtggcaa ggacgttaag gtatccgttg atatttcctt tatggaagct
      721 gtgcagggat gcaccagaaa agtagtcttc cagaccgagt tgacttgtca atcttgtgat
      781 ggaactggta tatttgtctt tgggcgcaca tgcaatacat gcaatggcca gaaggtaggg
      841 agaggatcaa agtcggttaa agtaaatata atgccaggag tggatacaaa tgaagaatta
      901 aagatttcta gaagtggtgg ggcagatcca gatggtaagc agccaggtga tctttatgtt
      961 gtcatcaagg tgcgagatca ctctgttttt cgacgacaag gaccagatat tcatgttgat
     1021 gcagttgtga gtaagactca gttaaggttt ggagggacta tacaagtctc aacattgacg
     1081 ggtgacgttc ttcttaaggt tcctccaaga accctacctg gtcaaaaagt agtaatgaag
     1141 ggaaaaggaa tcaaaactag aagctctaac tcatatggag atcagtacgt gcacttccgc
     1201 atgccaacgt tagatgaact gattaaagag ttggaacagc ttgctttcca aaaaaaaaaa
     1261 tagaaagaaa aaaaataaat aaacaaaaga aaagaaaaac aacaggttaa ataaagtgaa
     1321 taaagagttg tgaagaccta gaatgcacca gttgttctag tgaatggaag atcaatgttg
     1381 gccaagtcaa aggttccaac gggtaaatgt ttgtgttgtt gtaaatgtgg atacaaagga
     1441 accaagtaga agaaaaagca aaacactgga acaaatgagg ctgcagatga ctattattgg
     1501 gacagggtga tattgggcct atgactattg ggacagggtg atattgggcc tatgactatt
     1561 gggacaggct gatattgggc ctatgactat tgagacagga tgatattggg tctatgacta
     1621 ttgagccatc ggctgcttct ggattggatc aagcttcgaa acaggccaga gagtgggaag
     1681 tttattttac acgtttggaa gatggaaaca ttaggccaag aagaggtcaa ggataactac
     1741 aagaagttag tgtttgataa ggattctgct tatctttatt atgttcccca gtttttcttg
     1801 tttccctaga ctatttatat ttcttgttag gatttttaaa actcagttat cattattagt
     1861 atcacgctgc tgtttgggga gctttgcttg gtggtttcag aatggtgatt caacaatggc
     1921 agaaactact ttaaagaatc ttgttgaatt tgatgcagaa gattcgggta gttatgtact
     1981 tatagccaat ctttattcag attttggaaa tttagaaaat gtttcaaatg taaggcgaat
     2041 aatgaaagat agaggactaa ggaaggatcc tgggtgcagt tggattgaag tagataacag
     2101 ggtacatgtt tttacagtag aataagtaga tgatactaat catccaagaa ttagagatgt
     2161 ttattacaca ttagatgagg ttatacagaa aatagaagaa acgggaatgt atattaagaa
     2221 aaacagttct gtttatcact gtgaaaagct tgcgtttgag tttgggttat aagtttgcca
     2281 ggttggatgc cctattgata taatgtgaaa
//
LOCUS       XR_011756969            2196 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ GFA2,
            mitochondrial-like (LOC139839491), transcript variant X6, misc_RNA.
ACCESSION   XR_011756969
VERSION     XR_011756969.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2196
                     /gene="LOC139839491"
                     /note="chaperone protein dnaJ GFA2, mitochondrial-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839491"
     misc_RNA        1..2196
                     /gene="LOC139839491"
                     /product="chaperone protein dnaJ GFA2, mitochondrial-like,
                     transcript variant X6"
                     /db_xref="GeneID:139839491"
ORIGIN      
        1 cgtgataaaa aaagtaagga aagcgtgttt gattttgatt tccttccaaa tccacaatgt
       61 cagggttttt agggtttact gaaaatcccc tttttaacac tcatcgatac ctaaaatttc
      121 agttttgttt taccactaat ttaatactga ttacaaatac aaatacaaat acaaatacaa
      181 atacaaatac aaatggttgg ttataacggc attaaactcc tgtcatggat ttctcgacga
      241 accttctcca acgattccac cttgtatgaa tcgctggtta aaggaggtta tagaaagttt
      301 ggtacatcca ttcatactta ttactacatc attcctaact ctcaattagt taattcgaga
      361 tatcgggcaa attgtctaaa ggtgaatgcg tgttttggaa atactagatc gattcatggc
      421 acttcataca tggctgcaaa agattattat gatacactca aagtcaataa gaatgtgtct
      481 gcttcagaaa tcaagaaagc ctattacatg ttagcaaaga agtggcatcc agatgtaaat
      541 aaaaaagacc cagaagcagc tgaaacaatg tttaaggaaa tttcaaaggc atatgaggtt
      601 ctgaaagatg agaagaaacg agcagaatat gaccagaatt atggttttgg cgggcaactt
      661 ggttgtgatt ccggtggcaa ggacgttaag gtatccgttg atatttcctt tatggaagct
      721 gtgcagggat gcaccagaaa agtagtcttc cagaccgagt tgacttgtca atcttgtgat
      781 ggaactggta tatttgtctt tgggcgcaca tgcaatacat gcaatggcca gaaggtaggg
      841 agaggatcaa agtcggttaa agtaaatata atgccaggag tggatacaaa tgaagaatta
      901 aagatttcta gaagtggtgg ggcagatcca gatggtaagc agccaggtga tctttatgtt
      961 gtcatcaagg tgcgagatca ctctgttttt cgacgacaag gaccagatat tcatgttgat
     1021 gcagttgtga gtaagactca gttaaggttt ggagggacta tacaagtctc aacattgacg
     1081 ggtgacgttc ttcttaaggt tcctccaaga accctacctg gtcaaaaagt agtaatgaag
     1141 ggaaaaggaa tcaaaactag aagctctaac tcatatggag atcagtacgt gcacttccgc
     1201 atgccaacgt tagatgaact gattaaagag ttggaacagc ttgctttcca aaaaaaaaaa
     1261 tagaaagaaa aaaaataaat aaacaaaaga aaagaaaaac aacaggttaa ataaagtgaa
     1321 taaagagttg tgaagaccta gaatgcacca gttgttctag tgaatggaag atcaatgttg
     1381 gccaagtcaa aggttccaac gggtaaatgt ttgtgttgtt gtaaatgtgg atacaaagga
     1441 accaagtaga agaaaaagca aaacactgga acaaatgagg ctgcagatga ctattattgg
     1501 gacagggtga tattgggcct atgactattg ggacagggtg atattgggcc tatgactatt
     1561 gggacaggct gatattgggc ctatgactat tgagacagga tgatattggg tctatgacta
     1621 ttgagccatc ggctgcttct ggattggatc aagcttcgaa acaggccaga gagtgggaag
     1681 tttattttac acgtttggaa gatggaaaca ttaggccaag aagaggtcaa ggataactac
     1741 aagaatatca cgctgctgtt tggggagctt tgcttggtgg tttcagaatg gtgattcaac
     1801 aatggcagaa actactttaa agaatcttgt tgaatttgat gcagaagatt cgggtagtta
     1861 tgtacttata gccaatcttt attcagattt tggaaattta gaaaatgttt caaatgtaag
     1921 gcgaataatg aaagatagag gactaaggaa ggatcctggg tgcagttgga ttgaagtaga
     1981 taacagggta catgttttta cagtagaata agtagatgat actaatcatc caagaattag
     2041 agatgtttat tacacattag atgaggttat acagaaaata gaagaaacgg gaatgtatat
     2101 taagaaaaac agttctgttt atcactgtga aaagcttgcg tttgagtttg ggttataagt
     2161 ttgccaggtt ggatgcccta ttgatataat gtgaaa
//
LOCUS       XM_071829569            1941 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 27 (LOC139839493), mRNA.
ACCESSION   XM_071829569
VERSION     XM_071829569.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1941
                     /gene="LOC139839493"
                     /note="probable protein phosphatase 2C 27; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139839493"
     CDS             609..1772
                     /gene="LOC139839493"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 27"
                     /protein_id="XP_071685670.1"
                     /db_xref="GeneID:139839493"
                     /translation="MAAGTGFSQSYVMVDDSFNNDITSDREEKSQNSDQLSQLDVGKP
                     PRHLPVVRHSISTATLLTPTDPDFDLGIVSIKSTSGGKSEYTPMIRSGSCAEKGPKEY
                     MEDEHICIDDLLQHLDRTDGFPSLGAFYGVFDGHGGTDAACYVRKNILKFIVEDPHFP
                     GCLKKAIRNAYIKADQAFAENSSVDVSSGTTALTTFIFGRMMVVANAGDCRAVLGKRG
                     RALELSNDHKPNSISERHRIEQLGGVIYDGYLNGQLSVSRALGDWHMKGPKGSACSLS
                     AEPELQEILLMEDDEFLIMGCDGLWDVMSSQCAVTIARKELMIHNDPERCSRELVREA
                     LKRSTCDNLTVIVICFSPDPPPWIEVQSQMGGHRRSISSEGLNFLKGVLDGNM"
     misc_feature    732..1763
                     /gene="LOC139839493"
                     /note="Protein phosphatase 2c; Provisional; Region:
                     PLN03145"
                     /db_xref="CDD:215603"
ORIGIN      
        1 ctctctctga atctctgatt tctacttgaa gtagtgcttt ctagggtttc ttaaatttgg
       61 tcaaaattaa aataaaccaa ggaacaaaag tatcacaatc tgcttcttca tccgtgagca
      121 atctctctta tcagcatcta tcatactgtt aaattctcat taaagcttgg atcttgcttt
      181 taacaatcag tggatgttta taagtctaga ttccatttta tcaactattt aggttcaaga
      241 ttcggtctaa agttgtgatc tttcatgcta gcaataaggt ttttggttgg tttgtggact
      301 tattaatcac taatcattgg tttatgaata aaaattggat ctttgaaggt ctatgttcat
      361 gggttttgta taaattacta ggatcgcaat ggaataaacc cagaaaattg aagttgtgtg
      421 ttcttttttt gattgctttc tgataattct aagttggact atttaaggga ataaagcaac
      481 aactcgaaaa aaaagtaaaa accaactgct ccagatacag aataactagg cctaagtttt
      541 gtattgtttt gtttattcaa gatcttgttg aagggttagt agttgctttt actggagttg
      601 agtggtttat ggcagctggc acgggttttt cgcagtctta tgtaatggtg gatgatagtt
      661 ttaataatga tattacttca gatagagaag aaaagtctca aaattcagac caattgagtc
      721 aactcgatgt cggaaaaccg cctagacatc ttccggttgt tcgtcatagt ataagcacag
      781 caacgttgct gacgcctact gatccggatt ttgaccttgg gattgttagc ataaagtcaa
      841 cttcaggtgg gaaatcggaa tatactccga tgatcagatc gggaagttgt gcagaaaaag
      901 ggccgaaaga atatatggag gatgaacata tatgtataga cgaccttctt caacatttag
      961 acagaacaga cggttttcct tctcttggtg ctttctatgg agtttttgat ggtcatggtg
     1021 ggaccgacgc tgcatgttat gttagaaaga acatattgaa gttcatagta gaggatcctc
     1081 attttcctgg ttgcttgaaa aaggcgattc gaaatgcgta cataaaagct gatcaagcat
     1141 ttgcagagaa cagctcggtt gacgtatctt caggaactac tgcattgacc acattcatat
     1201 ttggaaggat gatggtagtt gcaaatgccg gcgattgtcg ggccgtgtta ggaaaaagag
     1261 gcagagcgtt agaactatca aacgaccaca agcctaatag tatatccgag agacatagaa
     1321 ttgaacaact tggtggtgtc atttatgacg gttacttaaa cggtcaatta tcagtttccc
     1381 gagccctcgg agattggcac atgaaaggcc cgaaaggctc agcctgctcg ttaagtgctg
     1441 aacccgagct acaagaaatc ttgttaatgg aagatgatga gtttctaatt atgggctgcg
     1501 atggtttatg ggatgtaatg agtagtcaat gtgctgtaac tatagcccga aaggaattga
     1561 tgattcataa tgaccctgaa cgatgttcac gagagcttgt tcgtgaagca cttaaaagga
     1621 gtacgtgcga taatttaacg gtgattgtga tatgtttttc gccggacccg ccaccgtgga
     1681 ttgaggtaca atctcaaatg ggtggtcata gaaggagtat atcttcggaa gggctaaatt
     1741 ttcttaaagg tgttttagac ggtaacatgt gaaagtcgtg tttataaagc tctggtgtag
     1801 tcgtttttgg gaaataagac aaatttgttt aatttctttt ttattattat tattttggtg
     1861 tatttttgta catttggtaa gttgtgttat cgatagatag aagtcatgat gtttcaatta
     1921 ttttccccaa tgtacaatat t
//
LOCUS       XR_011756970             374 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839494), ncRNA.
ACCESSION   XR_011756970
VERSION     XR_011756970.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..374
                     /gene="LOC139839494"
                     /note="uncharacterized LOC139839494; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839494"
     ncRNA           1..374
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839494"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839494"
ORIGIN      
        1 ctcgagttac cacacccctg acataaaatg cacgcctgta caagagtctc aatcccaatt
       61 cttcatctgc ttttgcattc cctgctatcc cttttgacat tcatcttctt caacattcaa
      121 caatgggcta ctttatttca tccaattctc tcttaacatg gaattgaagt gggatgtgtt
      181 ttacttcaga atcgttcttg attttaagat actcgaacac tgtcgaattt taatgatgac
      241 gttagatgaa tacttgattt ttggctcaaa acactaaggt atgttgcttt tgaatccgtt
      301 gtatctattc cacttcctac ttgatttggt tgccattcat tcattcatcc atgtcactta
      361 aacatatacg gagt
//
LOCUS       XM_071829570            3414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839495), mRNA.
ACCESSION   XM_071829570
VERSION     XM_071829570.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3414
                     /gene="LOC139839495"
                     /note="uncharacterized LOC139839495; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839495"
     CDS             1..3414
                     /gene="LOC139839495"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685671.1"
                     /db_xref="GeneID:139839495"
                     /translation="MNEPSLLFLSIRHLMGRSGFKFNSEKVAYLAYGRIQGKASLVAH
                     FQTSGLMNEDKRCCPILFHADGPNAGDQGKAALIAHFQNSRLMNEDNNIAAPILFHAD
                     GPNVGDQPRPSDPAICERNRHDVAYGYVLKMLFIVGLSMFSDFKGAECSICCSRCFAI
                     DFGPKPIKIFDEWLVMEGASKVINDAWNVKVNNHRLDGVFRTKLKNLKYALREWSQRT
                     FGKLDNDIEGLMNEACAWEKLAECRSLTDTERDKWLDSRKRWFELEKIKTSMAKQKSR
                     VKWILEGEENTKYFHSFIKRRHSRRNIRGLNIGGVWCENPIDIKQEVFRHFNDQFKVR
                     SSNNMKFMGPGTSHNGLLGPMPKQITPEQADCLEHMFSESEVLNAIGECCVSKAPGPD
                     GFNFKFFKLYWGLVKNDLINALNWFWDKCDISNGCNASFVTLVPKKIDPMGLNDFRPI
                     ILIGCYYKILAKILSIRIRNVLPGLIDKEQSAFLKGRYILDGALIVNESIDFLKRNKR
                     KSLMFKVDFEKAFDSLSWDFLLEIMKRMGFGDRWRKWILACLQSASISILVNGSPTNE
                     FRIERGVRQGDPISPFLFIIAAEGLNLLTKRAIECGLYKGVKIGSEDINISHLQYADD
                     TIFLGEWNRQNFCNLMKLLKCFENASGLKINYNKSKLFGLGVNKDEVEVLAIRVGCKI
                     GELPFTYLGLPMGKNMNRVENWDPVIEKFNKRLSDWKARTVSYGGRLTLVKSVLSSLP
                     LYYFSLFRAPLSVIKILEISLSPYDEGGLNIGSLRGKNLALLGKWFWRAKTECDSLWV
                     SVIRSIHGTNGLLLHPGSRIPNGKSSVWVNIMRAGYTIEDLGVNFTNSFSRLIGDGSS
                     TQFWEEPWLITAPLKDTFKRLYHLEAVRNAWVRDRIAWSNLSVESCWNWLREPTGRAL
                     NELNQLLNLLNSYVKSGRDTDTWVWNLSSSGLFTTKRLATLIDEKIIGGYASANDETL
                     KNNLVPLKVELFIWRMLKRRIPVRAELDKRGIDLDSVLCPLCDNDVESIEHLMVFCQQ
                     SMDIWERVYKWWGLGPVTNLSINEAFRGNCNRSSSPLGSKIWQALEWTCAYLIWRNRN
                     QMVFSKKSWNSPTALMEIQLKSFEWISTRIKGRKLEWLTWLSDPWSCLI"
     misc_feature    <61..138
                     /gene="LOC139839495"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    1285..2082
                     /gene="LOC139839495"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1546..1563,1723..1728,1861..1863,1867..1872,
                     2068..2073)
                     /gene="LOC139839495"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1546..1563,1723..1725,1867..1869)
                     /gene="LOC139839495"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1726..1728
                     /gene="LOC139839495"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <2920..3084
                     /gene="LOC139839495"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaatgagc cttccttatt gttcctttct atcaggcatt taatgggaag aagtgggttt
       61 aagttcaaca gtgaaaaggt ggcttatctt gcatatggtc gcatacaggg aaaagcttca
      121 ctcgtcgctc actttcagac ttcaggtttg atgaatgaag ataaacgttg ctgccccatt
      181 ctttttcacg ccgatggtcc taatgccggc gatcagggaa aagctgcact catcgcccat
      241 tttcagaatt caagattgat gaatgaagat aataacattg ctgcccccat tctttttcac
      301 gccgatggac ctaatgtcgg tgatcagcct agaccctctg atcctgctat ttgcgagcga
      361 aataggcatg atgtggctta tggatacgta ctaaagatgt tgtttatagt tggattatcg
      421 atgttctctg attttaaagg tgctgaatgt tctatctgtt gttcaaggtg ttttgctatc
      481 gattttggcc ctaaaccaat caaaattttc gatgaatggt tggtgatgga aggtgcgagc
      541 aaggttatca acgatgcttg gaatgtcaag gttaataacc atagacttga tggcgtattt
      601 agaacaaagc taaaaaactt gaaatatgcc ttaagagagt ggagtcagcg gacttttggg
      661 aaattggaca atgatattga aggtttgatg aatgaagcgt gtgcttggga aaaattggcc
      721 gaatgtagat ccctaactga taccgaaagg gataaatggt tagactcgag aaagaggtgg
      781 tttgagctag aaaagatcaa gacaagcatg gcaaaacaaa agtctcgagt taagtggatc
      841 cttgaaggcg aagaaaacac taaatatttt cactccttta taaaacgaag acactctaga
      901 cgtaacattc ggggtctaaa tattggtggt gtttggtgcg aaaatcctat tgatatcaaa
      961 caggaagtgt tcaggcactt taatgatcaa ttcaaagtga ggtccagcaa caatatgaaa
     1021 ttcatggggc ctggtacatc acataatggg cttctcggcc caatgccgaa gcagattacc
     1081 cccgagcaag ccgactgcct ggaacatatg ttttcggaat cagaagttct caacgctatt
     1141 ggtgaatgtt gtgtgtcaaa ggcccccggg ccggatggat tcaatttcaa gttcttcaaa
     1201 ttatattggg gccttgtaaa gaatgatctt ataaacgctc taaattggtt ttgggacaaa
     1261 tgtgacattt ccaacggttg caatgcttct tttgtaacct tagtaccaaa gaagattgac
     1321 cctatggggt tgaacgattt tcgtcccatt atcctaattg gatgctacta taagattctt
     1381 gcgaagatcc tttcaattcg aatccgtaat gtgctacccg gtcttattga taaagagcaa
     1441 agcgcgtttt taaaaggaag atatattcta gatggtgcac tcattgtaaa cgagtcgatt
     1501 gattttctca aaaggaataa gagaaaaagc ctaatgttca aggtggattt tgagaaagct
     1561 ttcgatagtc taagttggga tttccttctt gagatcatga agagaatggg gtttggagat
     1621 agatggcgaa aatggatact tgcttgcctt caatccgcat ctatatctat tcttgttaac
     1681 ggttcgccta ctaatgagtt ccgtatagaa cgtggagtga ggcaagggga cccgatatcc
     1741 ccgtttcttt ttataatcgc ggcggaaggt ttaaaccttc tcactaaaag agctatcgag
     1801 tgtggattgt acaaaggtgt aaaaattgga tcggaggaca tcaacatctc gcaccttcaa
     1861 tatgcggatg acaccatttt ccttggtgaa tggaaccggc aaaatttttg caacttgatg
     1921 aaacttctca aatgttttga aaacgcttcg ggtctcaaaa ttaattataa taagagcaaa
     1981 ttattcgggt taggtgtcaa taaagacgaa gttgaagttt tggctattcg ggtcggttgt
     2041 aaaattggtg agcttccgtt cacatatctt gggctaccta tgggtaagaa catgaatcgt
     2101 gtagaaaatt gggatcccgt tattgaaaag ttcaacaaga gactatcgga ttggaaagcc
     2161 cgaacggttt cttatggtgg aaggttgacg cttgttaaat cggttcttag tagcctaccg
     2221 ttatattatt tttctctctt tcgtgccccg ttgagtgtaa tcaaaattct tgagatttct
     2281 ctctcgcctt atgacgaggg aggacttaac atcgggtctc ttcgggggaa aaaccttgct
     2341 ttgttgggga aatggttttg gagggccaaa accgaatgtg actcactttg ggtgtcggtt
     2401 attcgaagta ttcatggtac taacggccta ctcctacatc cgggttctcg tatcccgaat
     2461 ggaaagagta gtgtttgggt taacattatg cgtgcaggtt atactatcga agacttagga
     2521 gtaaacttca ctaactcctt ttcaagactt attggtgatg gctcgagcac acagttttgg
     2581 gaagaaccgt ggctgattac agctcctcta aaggacactt tcaagcgact ttatcatttg
     2641 gaagctgttc gaaatgcatg ggtacgagac aggatcgcgt ggagcaatct ttcggttgaa
     2701 tcctgctgga attggcttcg tgagcctacg ggacgagcac taaatgaatt aaatcagcta
     2761 ttgaacctac tgaattcata tgttaaatcg ggcagggaca cggatacgtg ggtttggaac
     2821 ttatcttcaa gcgggttgtt cactaccaaa agactcgcaa ctctaatcga cgaaaaaata
     2881 attggagggt acgcatccgc aaacgacgaa acacttaaaa acaatcttgt tccgttgaaa
     2941 gttgagcttt tcatatggag gatgctaaaa agacggattc cggttcgggc cgagcttgat
     3001 aaacgcggaa tcgatttgga ctccgtttta tgtcccctat gtgataatga cgtggaatct
     3061 attgagcatt tgatggtttt ttgccaacaa tcgatggata tttgggaacg tgtttacaaa
     3121 tggtgggggt taggtccggt tacaaatttg agcatcaacg aggctttccg aggcaattgt
     3181 aaccgctcct cttccccatt gggttcgaag atatggcaag cattggaatg gacttgtgcg
     3241 tatttaatat ggaggaatcg aaaccaaatg gtattctcca agaaatcgtg gaattcaccg
     3301 acggcgttaa tggagatcca actcaaatca tttgaatgga tttctactcg aattaagggt
     3361 cgcaaattgg agtggttaac gtggctttcg gatccgtggt cttgcttgat ttag
//
LOCUS       XM_071829571            1899 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heat shock cognate 70 kDa
            protein-like (LOC139839496), mRNA.
ACCESSION   XM_071829571
VERSION     XM_071829571.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1899
                     /gene="LOC139839496"
                     /note="heat shock cognate 70 kDa protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 44 Proteins"
                     /db_xref="GeneID:139839496"
     CDS             160..1899
                     /gene="LOC139839496"
                     /codon_start=1
                     /product="heat shock cognate 70 kDa protein-like"
                     /protein_id="XP_071685672.1"
                     /db_xref="GeneID:139839496"
                     /translation="MNPTNTIFDAKRLIGRNYSDSKVQDDMKLWPFKVIEGPSDTPKI
                     VVTYKGFDKEFTAEEISSMILGKMKETAEAYLGQVVKDVVITVPAYFNDSQRQATKDA
                     GTIAGLHVIRIINEPTAAAITYGLDNNMSEYDKNVLIFDLGGGTFDVSIVTIKRGGGK
                     FEVKAVSGDTHLGGEDFDNRMLEHCVVEFKRKYRKDLNGNQRAIGRLRSACEKAKRIL
                     SCSVQTSIQVDCLHEGIDFSINFTRAKFEDLNKSMFDSCIKIVEKCLHDAMMEKSQVD
                     EIVLVGGSTRIPKVQSMLEDYFDGKELCKGVNPDEAVAYGAAVMAAKLGGRDDNNNTN
                     NYVRDLVLVDVTPLSLGVELYEDLFHAIIPRNTPIPTNKSHICCTLHDNQTTALIKVY
                     QGERARSIDNHLLGKYTVSGIPPAPRLTSSIEIIFNIDADGILTVTSRILSTGKTEKL
                     IITNENGRLSKQEIEKMVKDGERYKYEDQEFKKRVDAYNALENCLYYIKNKLGDDDFK
                     KRVHRNSMEKIENAIAVTTMWLLDNPAATAEELLQRKIKLTSEVQRFSSESRPTDIRN
                     LSSSFRRLLNERH"
     misc_feature    160..1779
                     /gene="LOC139839496"
                     /note="heat shock 70 kDa protein; Provisional; Region:
                     PTZ00009"
                     /db_xref="CDD:240227"
ORIGIN      
        1 ggaattgact tgggaacaac gtactcatgt gttggcgtat ggaagcataa tcgagtcgaa
       61 atcatagcga atgatcaagg caaccgaact acaccttctt ccgttgcttt cactcctaat
      121 gatcgtctca ttggcgaagc tgccaagaat caactaccta tgaatcctac caacaccata
      181 tttgatgcaa agaggttgat tggacggaat tatagtgata gcaaagtgca ggatgacatg
      241 aagttgtggc cttttaaagt catagaaggt ccttccgaca caccaaagat cgttgtcacc
      301 tacaaaggtt ttgataagga attcacggcc gaagaaattt catcaatgat tcttggtaag
      361 atgaaagaaa ccgcagaggc ctaccttgga caagttgtga aagatgtggt tatcaccgtt
      421 ccagcttatt ttaatgattc ccaacgtcaa gctacaaagg atgcaggcac tatcgctggc
      481 ttacacgtta tccgcatcat taatgagccc actgctgctg caatcactta tggtttagac
      541 aacaacatgt ctgaatatga taaaaatgtg ctcatctttg atttgggtgg tggtactttt
      601 gatgtctcta tagtgactat taagagggga gggggtaagt ttgaggtgaa agctgtttct
      661 ggtgacactc atttgggagg tgaggatttt gataatcgaa tgttggagca ttgcgttgtt
      721 gaatttaaaa ggaagtatcg taaggactta aatgggaatc aaagagcgat agggaggtta
      781 agatctgctt gtgagaaagc aaaaaggatt ctctcgtgta gtgttcaaac gtcaatccaa
      841 gtggattgct tgcacgaggg gattgatttt tctatcaact ttactcgagc taaatttgaa
      901 gatctgaaca agagcatgtt tgactcttgt atcaagatcg tagaaaaatg tttacacgac
      961 gcaatgatgg agaaatcaca agtagatgag attgttctag ttggtggctc gactaggata
     1021 cctaaggttc aaagtatgtt agaagattat tttgatggta aggagctttg caagggtgtg
     1081 aaccctgatg aggctgttgc gtacggtgca gccgttatgg ctgcaaaatt aggaggacgt
     1141 gatgataata ataatacaaa taactatgtt cgtgatttgg tgctagtaga cgtcactcct
     1201 ttgtcacttg gtgtagagtt atatgaagat ctatttcatg ctatcatacc gcgaaacact
     1261 ccaataccaa caaacaaatc ccatatttgt tgtacgcttc acgataatca aacgactgcg
     1321 ctcatcaagg tgtatcaagg tgaaagagca agatctattg ataaccatct gttggggaag
     1381 tatacagttt ctggtattcc acctgctccc cgattgactt catcaattga gattatcttt
     1441 aacatagatg ctgacggtat cctgacagtc acgtcaagga tcttatcgac tggtaagacg
     1501 gagaaactta tcattaccaa tgaaaatgga agactctcca aacaagaaat tgagaagatg
     1561 gttaaagacg gtgaaagata caaatatgag gatcaagaat ttaagaagag agtggatgca
     1621 tacaatgcat tagaaaactg cttatattat attaaaaata aactcggcga tgatgatttc
     1681 aagaaaaggg tgcaccggaa cagcatggag aaaatcgaga atgctatcgc cgtcacaacc
     1741 atgtggctct tggataatcc agcagcaact gcagaagagc ttctgcaaag gaagattaag
     1801 ttgacaagtg aggtgcaacg cttttcaagt gaatcaagac cgacagatat aagaaattta
     1861 agcagctcgt ttagaaggct actaaatgaa agacattaa
//
LOCUS       XM_071829572            1635 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides catalase (LOC139839497),
            mRNA.
ACCESSION   XM_071829572
VERSION     XM_071829572.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1635
                     /gene="LOC139839497"
                     /note="catalase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 59 Proteins"
                     /db_xref="GeneID:139839497"
     CDS             57..1535
                     /gene="LOC139839497"
                     /codon_start=1
                     /product="catalase"
                     /protein_id="XP_071685673.1"
                     /db_xref="GeneID:139839497"
                     /translation="MDPYKYRPSSAYNAPFWTTNSGAPVYNNNNSLTVGTRGPILLED
                     YHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISGLTCADFLRAPGVQTPVIVR
                     FSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKP
                     NPKSHIQEDWRILDFFSHHPESLHMFTFLQDDIGIPQDYRHMEGSGVNTYTLINKTGK
                     AYYVKFHWKPTCGVKSLLDDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLFIQTIDP
                     DHEDRFDFDPLDVTKTWPEDILLLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVY
                     YSDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEINY
                     FPSRHDPARHAEMYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFITRI
                     VGALSDPRVTHEVRTIWVSYWSQADKSLGQKIASRLNVKPSY"
     misc_feature    57..1532
                     /gene="LOC139839497"
                     /note="catalase; Region: PLN02609"
                     /db_xref="CDD:215328"
     polyA_site      1635
                     /gene="LOC139839497"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtcttcttc tcttctctca agaaatcgat tacagaattc acctacattc aaatccatgg
       61 atccttacaa gtaccgtcct tcaagtgcat acaatgctcc attttggact accaattctg
      121 gtgctccggt ttacaacaac aacaactcgt taacagttgg aaccagaggc ccaatccttc
      181 ttgaagacta tcatttggtg gagaaactag ctaacttcga tcgtgaacgt attcctgaac
      241 gtgttgttca tgccaggggt gctagtgcaa agggattctt cgaggtcaca catgacattt
      301 ctggcctcac gtgtgctgat tttcttcgtg cgcctggtgt ccaaacgccc gttattgttc
      361 gtttctctac tgttatccat gaacgtggta gccctgaaac tctcagggac cctcgaggtt
      421 ttgcggtaaa attctacacc agagagggta actttgattt ggtgggaaac aatttcccgg
      481 tgttctttat tcgtgacggg atgaaatttc ccgacatggt tcatgctctg aaacccaacc
      541 ctaagtcaca catccaagaa gactggagaa ttctcgactt cttctcgcac catcccgaaa
      601 gcttgcacat gtttacattc cttcaagatg acatcggcat accacaagat taccgacaca
      661 tggaaggttc cggagtcaac acgtacactt taatcaacaa aaccggcaaa gcgtattacg
      721 ttaaattcca ttggaaaccg acatgcggag taaaaagcct attagatgac gaggcgatta
      781 aagttggagg agccaatcat agccatgcaa cacaggacct ttatgattca attgcagctg
      841 ggaactatcc tgaatggaag cttttcattc agaccattga ccctgatcat gaagataggt
      901 ttgactttga cccgctcgat gtaaccaaga cctggcctga ggatatttta ctgttgcagc
      961 ctgttggtcg tatggttttg aacaagaaca ttgacaattt ctttgcagaa aacgaacagc
     1021 ttgcgttttg tcctgcgatt attgtccctg gagtttatta ttctgatgat aagctgcttc
     1081 aaactcgtat tttctcgtat gctgatactc aaaggcatcg tcttggtcca aattatttgc
     1141 agcttcctgc taatgctcca aaatgtgctc atcataataa tcatcatgat gggttcatga
     1201 atttcatgca cagagatgaa gagatcaatt atttcccttc aagacacgat cctgcacgtc
     1261 atgctgagat gtaccccatt ccccctgtta gattgtcagg aaagcgtgat aagtgtgtga
     1321 ttgagaaaga gaacaacttt aagcagccag gagagagata cagatcgttt tctccagaca
     1381 gacaagaacg attcatcacc aggattgtcg gtgctctttc cgacccacgg gtcacccacg
     1441 aggtccgcac aatctgggta tcatactggt cacaggctga caagtcactt gggcaaaaaa
     1501 tagcttcgcg cttgaatgtg aagccgagtt actaaaggtg atatcagtcc tttcttttat
     1561 cgttctaatg tcgaataact ctgaatgatg ctaattatga tgtttctttc taataaagtt
     1621 ggtttaatgt cacta
//
LOCUS       XM_071829573             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139839498), mRNA.
ACCESSION   XM_071829573
VERSION     XM_071829573.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139839498"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839498"
     CDS             1..498
                     /gene="LOC139839498"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071685674.1"
                     /db_xref="GeneID:139839498"
                     /translation="MHASKVSHLNCALRVLRYLKSALGKGICIRKYNDNDLVCYVDSD
                     WGKRVMAMKSVTGYCLFLNGSLLTWKSKKQDCVSRSSAEVEYRALADASSIKIAANPV
                     FHEKTKHFDLDLHFVRDKINKGVIQTKKIDSAENKADVFTKGVCSFEHNKMCNLLGLK
                     DCFGN"
     misc_feature    112..435
                     /gene="LOC139839498"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(124..135,238..246,253..255,346..348,427..429)
                     /gene="LOC139839498"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcatgctt ctaaggtttc tcatttgaat tgtgcattaa gagttttgag atatctcaag
       61 tctgcacttg gaaaaggtat ttgtataaga aagtataatg ataatgatct tgtgtgctat
      121 gtggattctg attggggtaa aagagttatg gctatgaaat ctgtgactgg ctattgtttg
      181 tttttgaatg gttcacttct tacttggaaa agtaagaagc aagattgtgt ttcaagatct
      241 tctgcagagg ttgagtatag agcccttgca gatgcatcat caatcaagat tgctgcaaat
      301 cctgtttttc atgagaaaac taaacatttt gatttggatt tgcattttgt tagagataaa
      361 ataaataaag gtgttattca aactaaaaag attgattctg ctgaaaataa agctgatgta
      421 tttacaaaag gggtgtgttc ttttgaacac aacaaaatgt gtaatcttct tggtttaaaa
      481 gattgttttg gcaattag
//
LOCUS       XR_011756971             348 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839499), ncRNA.
ACCESSION   XR_011756971
VERSION     XR_011756971.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..348
                     /gene="LOC139839499"
                     /note="uncharacterized LOC139839499; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839499"
     ncRNA           1..348
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839499"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839499"
ORIGIN      
        1 tatgtatact tgcttttgca actaacaccg ttgcacttca gcatatggat agaaggctac
       61 atggacttca tatttgttgc ttcttgttgg ggctatgatg gtaatgattg agttcaaaaa
      121 aaccgagcct gctgccattt tgggaaatta ttgtaaaatt ggctgcattc gactttttaa
      181 atcaacaaag tactaattga tgattgtggt tcttgggtta aagtttgcat caatgtgggt
      241 cacaagtctc aagttggtag aaaattatac ggttttaagg gaaaagacaa aagaggtttt
      301 gatgtaggag tttgattaat tgatatcttt cttaattttg gaacgtta
//
LOCUS       XR_011756972             279 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839500), ncRNA.
ACCESSION   XR_011756972
VERSION     XR_011756972.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..279
                     /gene="LOC139839500"
                     /note="uncharacterized LOC139839500; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839500"
     ncRNA           1..279
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839500"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839500"
ORIGIN      
        1 aaaaaaaaaa acagatagtg cctgtgtgca ctgaagaagc tgcattttgt ttttagatcg
       61 tctgatactt gttatcgctg tttttggatt ctagaagctt ctttttttgc catttctgtg
      121 caccgaagtc gtcaacaaaa taatggtgaa agtttgtgaa atatgtggtg atatcggtga
      181 cgctttagca atcataacat gttgcgagtg tttaagttct tgccagcatc tttactgcat
      241 gagggtagtt atggacgagg ctcccgcatt ttggacgtg
//
LOCUS       XM_071829574            2055 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-rich interactive
            domain-containing protein 6-like (LOC139839501), transcript variant
            X1, mRNA.
ACCESSION   XM_071829574
VERSION     XM_071829574.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2055
                     /gene="LOC139839501"
                     /note="AT-rich interactive domain-containing protein
                     6-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139839501"
     CDS             265..1896
                     /gene="LOC139839501"
                     /codon_start=1
                     /product="AT-rich interactive domain-containing protein
                     6-like isoform X1"
                     /protein_id="XP_071685675.1"
                     /db_xref="GeneID:139839501"
                     /translation="MDQKDIEMEDAGKLIEDEVVGDQERVEKDQPAVTQVGDKREESS
                     DAVNDDVSVRSSTEIGVEQEEEKQEDLSEKDAEGMNPNISEPVDEGRDSVKDATEMGD
                     HDDNIDNSKQDATEMGDDGNNDATKLGDDGKIDDSKNSAAEMGDDGKNDGTLTANDDK
                     VDDSKNDAADMDDEGGATNEIDDDGSVKNPENNDEVDNSGYEKHQEHATPRSLANYSP
                     NKVEDHIAEPPKNELNDAHMDEGYESGTADDQERFMKEVDNFYKARGLEFKPPKFYGQ
                     MLNCLKLWRSVIKLGGYDRVTANKWWRQVGEAFHPPKTCTTVSWTFRIFYEKALLEYE
                     RHKIQIGDVELPLATVSPEAPTVENEANGYQLPGSGSGRARRDSAARAMQGWHSQHHS
                     NYGGEEKNSNNSQKREKSLKSIGLLKHKRPSEVEHSLKAARIETSRQVVTTVADIGPP
                     ANWVKINVRETKDCFEVYALVPGLLREEVRVQSDPAGRVVITGQPEQLDNPWGITAFK
                     KVVSLPARIDPLRTAATVSLHGRLLVRVPFEQSNI"
     misc_feature    <376..>888
                     /gene="LOC139839501"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    1009..1272
                     /gene="LOC139839501"
                     /note="ARID (A/T-rich interaction domain) domain; Region:
                     BRIGHT; smart00501"
                     /db_xref="CDD:128777"
     misc_feature    1633..1875
                     /gene="LOC139839501"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     Region: ACD_sHsps-like; cd06464"
                     /db_xref="CDD:107221"
     misc_feature    order(1633..1647,1666..1668,1672..1674,1678..1683,
                     1789..1791,1852..1857)
                     /gene="LOC139839501"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:107221"
     polyA_site      2055
                     /gene="LOC139839501"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aggaaccgtt ccctgatatt gacgaacaaa ccgcagcagc agcagcagca gcaggaacta
       61 aaattctccg gcgttaccat tgctgtctat tcaccaatca cgaccctcca cgtgtctcgt
      121 ttttacgaaa ccctcacata tcagtctatc atacttatcc ataaatccgt tacacacaca
      181 aacactcttc cccctgaaac acctaaacga cgaaattaga aaccctagct taattaccct
      241 tttatagcta aataaagaat tataatggat cagaaggaca tcgagatgga ggatgctgga
      301 aagcttatag aagatgaagt tgtgggtgat caagaacgtg tggaaaagga tcagccagcc
      361 gtaacacaag taggagacaa acgagaagaa tcgtctgatg cagtaaatga tgatgtcagc
      421 gttcgaagct caaccgaaat tggggtagag caggaagaag aaaagcaaga agatctaagt
      481 gagaaagatg ctgaggggat gaaccctaac ataagtgagc ctgtggacga gggtcgggat
      541 agtgtgaaag atgctacaga aatgggtgat catgatgata atattgataa tagtaaacaa
      601 gatgctacgg aaatgggcga tgatggtaat aatgatgcta caaaattggg tgatgatggt
      661 aagattgatg atagtaagaa cagtgctgct gaaatgggtg atgatggtaa gaatgatggt
      721 acattgacag ctaatgatga taaggttgat gatagtaaga atgatgctgc agatatggac
      781 gatgaaggtg gtgcaacaaa tgaaattgac gatgatggtt ctgtgaagaa tccagagaac
      841 aacgatgaag tagataatag tggatatgaa aaacatcaag agcatgctac accccgctcc
      901 cttgcgaatt attcacctaa taaagttgag gatcatattg cagagccacc aaagaacgag
      961 ctaaacgatg cacatatgga tgaaggatac gagtctggga ctgcagatga tcaagaaaga
     1021 ttcatgaaag aggtggacaa tttttataag gcgagaggat tggagtttaa gcctcctaag
     1081 ttttatggac agatgttaaa ttgtctcaag ttatggaggt ccgttatcaa attgggtgga
     1141 tatgaccggg taactgcaaa caaatggtgg cggcaagtgg gagaagcttt tcatccgccc
     1201 aagacatgca caactgtttc gtggacattc cgtatattct acgaaaaggc acttcttgaa
     1261 tacgaaaggc ataagatcca aattggggat gttgaactcc cacttgcaac tgtttcacct
     1321 gaagccccta ctgttgaaaa tgaggcaaat ggttatcagc tgccaggatc gggatcaggt
     1381 agggcacgga gggattctgc agctcgagcc atgcagggtt ggcattcaca acatcattca
     1441 aattatggtg gtgaggaaaa gaattccaac aattcacaaa agcgcgaaaa aagtctcaaa
     1501 agcattgggt tgcttaaaca caagagacca agtgaagtgg agcattctct gaaagctgca
     1561 cgaattgaaa cctctaggca agttgtcacc acagttgctg atatcggtcc tccagctaat
     1621 tgggtgaaga taaatgttcg agaaactaaa gattgctttg aggtatatgc ccttgttcca
     1681 gggcttctgc gtgaagaggt acgtgttcaa tcggatccag ctggacgtgt agtcatcaca
     1741 ggtcaaccag agcaacttga taacccatgg ggtattacag ctttcaaaaa ggtggtcagc
     1801 ttaccagcaa gaattgatcc acttcgtaca gcagcaactg tcagcctaca tggacgactg
     1861 ttggttcgtg tgccttttga gcagtcaaac atctaaatat ttactctttc ggacttgcat
     1921 tacgacattt catgaattag caggggaata gttagtgtta attatgattg tttagtagaa
     1981 gatatgattt gtctgttcgt gtatggttta cagctgagta cttcagtttt taaacatacc
     2041 aaaaagttag taata
//
LOCUS       XM_071829575            1989 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-rich interactive
            domain-containing protein 6-like (LOC139839501), transcript variant
            X2, mRNA.
ACCESSION   XM_071829575
VERSION     XM_071829575.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1989
                     /gene="LOC139839501"
                     /note="AT-rich interactive domain-containing protein
                     6-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139839501"
     CDS             265..1830
                     /gene="LOC139839501"
                     /codon_start=1
                     /product="AT-rich interactive domain-containing protein
                     6-like isoform X2"
                     /protein_id="XP_071685676.1"
                     /db_xref="GeneID:139839501"
                     /translation="MDQKDIEMEDAGKLIEDEVVGDQERVEKDQPAVTQVGDKREESS
                     DAVNDDVSVRSSTEIGVEQEEEKQEDLSEKDAEGMNPNISEPVDEGRDSVKDATEMGD
                     HDDNIDNSKQDATEMGDDGNNDATKLGDDGKIDDSKNSAAEMGDDDMDDEGGATNEID
                     DDGSVKNPENNDEVDNSGYEKHQEHATPRSLANYSPNKVEDHIAEPPKNELNDAHMDE
                     GYESGTADDQERFMKEVDNFYKARGLEFKPPKFYGQMLNCLKLWRSVIKLGGYDRVTA
                     NKWWRQVGEAFHPPKTCTTVSWTFRIFYEKALLEYERHKIQIGDVELPLATVSPEAPT
                     VENEANGYQLPGSGSGRARRDSAARAMQGWHSQHHSNYGGEEKNSNNSQKREKSLKSI
                     GLLKHKRPSEVEHSLKAARIETSRQVVTTVADIGPPANWVKINVRETKDCFEVYALVP
                     GLLREEVRVQSDPAGRVVITGQPEQLDNPWGITAFKKVVSLPARIDPLRTAATVSLHG
                     RLLVRVPFEQSNI"
     misc_feature    943..1206
                     /gene="LOC139839501"
                     /note="ARID (A/T-rich interaction domain) domain; Region:
                     BRIGHT; smart00501"
                     /db_xref="CDD:128777"
     misc_feature    1567..1809
                     /gene="LOC139839501"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     Region: ACD_sHsps-like; cd06464"
                     /db_xref="CDD:107221"
     misc_feature    order(1567..1581,1600..1602,1606..1608,1612..1617,
                     1723..1725,1786..1791)
                     /gene="LOC139839501"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:107221"
     polyA_site      1989
                     /gene="LOC139839501"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aggaaccgtt ccctgatatt gacgaacaaa ccgcagcagc agcagcagca gcaggaacta
       61 aaattctccg gcgttaccat tgctgtctat tcaccaatca cgaccctcca cgtgtctcgt
      121 ttttacgaaa ccctcacata tcagtctatc atacttatcc ataaatccgt tacacacaca
      181 aacactcttc cccctgaaac acctaaacga cgaaattaga aaccctagct taattaccct
      241 tttatagcta aataaagaat tataatggat cagaaggaca tcgagatgga ggatgctgga
      301 aagcttatag aagatgaagt tgtgggtgat caagaacgtg tggaaaagga tcagccagcc
      361 gtaacacaag taggagacaa acgagaagaa tcgtctgatg cagtaaatga tgatgtcagc
      421 gttcgaagct caaccgaaat tggggtagag caggaagaag aaaagcaaga agatctaagt
      481 gagaaagatg ctgaggggat gaaccctaac ataagtgagc ctgtggacga gggtcgggat
      541 agtgtgaaag atgctacaga aatgggtgat catgatgata atattgataa tagtaaacaa
      601 gatgctacgg aaatgggcga tgatggtaat aatgatgcta caaaattggg tgatgatggt
      661 aagattgatg atagtaagaa cagtgctgct gaaatgggtg atgatgatat ggacgatgaa
      721 ggtggtgcaa caaatgaaat tgacgatgat ggttctgtga agaatccaga gaacaacgat
      781 gaagtagata atagtggata tgaaaaacat caagagcatg ctacaccccg ctcccttgcg
      841 aattattcac ctaataaagt tgaggatcat attgcagagc caccaaagaa cgagctaaac
      901 gatgcacata tggatgaagg atacgagtct gggactgcag atgatcaaga aagattcatg
      961 aaagaggtgg acaattttta taaggcgaga ggattggagt ttaagcctcc taagttttat
     1021 ggacagatgt taaattgtct caagttatgg aggtccgtta tcaaattggg tggatatgac
     1081 cgggtaactg caaacaaatg gtggcggcaa gtgggagaag cttttcatcc gcccaagaca
     1141 tgcacaactg tttcgtggac attccgtata ttctacgaaa aggcacttct tgaatacgaa
     1201 aggcataaga tccaaattgg ggatgttgaa ctcccacttg caactgtttc acctgaagcc
     1261 cctactgttg aaaatgaggc aaatggttat cagctgccag gatcgggatc aggtagggca
     1321 cggagggatt ctgcagctcg agccatgcag ggttggcatt cacaacatca ttcaaattat
     1381 ggtggtgagg aaaagaattc caacaattca caaaagcgcg aaaaaagtct caaaagcatt
     1441 gggttgctta aacacaagag accaagtgaa gtggagcatt ctctgaaagc tgcacgaatt
     1501 gaaacctcta ggcaagttgt caccacagtt gctgatatcg gtcctccagc taattgggtg
     1561 aagataaatg ttcgagaaac taaagattgc tttgaggtat atgcccttgt tccagggctt
     1621 ctgcgtgaag aggtacgtgt tcaatcggat ccagctggac gtgtagtcat cacaggtcaa
     1681 ccagagcaac ttgataaccc atggggtatt acagctttca aaaaggtggt cagcttacca
     1741 gcaagaattg atccacttcg tacagcagca actgtcagcc tacatggacg actgttggtt
     1801 cgtgtgcctt ttgagcagtc aaacatctaa atatttactc tttcggactt gcattacgac
     1861 atttcatgaa ttagcagggg aatagttagt gttaattatg attgtttagt agaagatatg
     1921 atttgtctgt tcgtgtatgg tttacagctg agtacttcag tttttaaaca taccaaaaag
     1981 ttagtaata
//
LOCUS       XM_071829576             417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome regulatory
            subunit 7 homolog A-like (LOC139839502), transcript variant X1,
            mRNA.
ACCESSION   XM_071829576
VERSION     XM_071829576.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139839502"
                     /note="26S proteasome regulatory subunit 7 homolog A-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839502"
     CDS             64..393
                     /gene="LOC139839502"
                     /codon_start=1
                     /product="26S proteasome regulatory subunit 7 homolog
                     A-like isoform X1"
                     /protein_id="XP_071685677.1"
                     /db_xref="GeneID:139839502"
                     /translation="MPTDIEDEINDEKNLKPLDEHDIALLKTSVTNFPGLGPYSINIK
                     EAEKDVKDKPKRINDLCGIKESDTGLAAPSQWVLDEDDIAILKAYGVRSYSISIKKAE
                     KDVKDMA"
ORIGIN      
        1 gaaacctatt gttgttcctt gtacaccatc catctccggc gacaaaaaat ttgtaaactc
       61 aagatgccga ctgacattga agacgagatc aacgacgaga agaaccttaa acctcttgat
      121 gaacatgata ttgctcttct caagacttct gtaaccaatt ttccaggatt gggaccttat
      181 tccatcaaca ttaaggaagc cgaaaaggat gtgaaggaca agcccaaaag gatcaatgat
      241 ttatgcggta tcaaggaatc ggacaccggt ttagctgcac ctagccagtg ggtgcttgat
      301 gaagatgata ttgctattct caaggcttat ggggttagat cttattccat cagcatcaag
      361 aaagcggaaa aggatgtaaa ggacatggcc taatggatca atgatttatg cggtatt
//
LOCUS       XM_071829577             402 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome regulatory
            subunit 7 homolog A-like (LOC139839502), transcript variant X2,
            mRNA.
ACCESSION   XM_071829577
VERSION     XM_071829577.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..402
                     /gene="LOC139839502"
                     /note="26S proteasome regulatory subunit 7 homolog A-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839502"
     CDS             64..378
                     /gene="LOC139839502"
                     /codon_start=1
                     /product="26S proteasome regulatory subunit 7 homolog
                     A-like isoform X2"
                     /protein_id="XP_071685678.1"
                     /db_xref="GeneID:139839502"
                     /translation="MPTDIEDEINDEKNLKPLDEHDIALLKTSGLGPYSINIKEAEKD
                     VKDKPKRINDLCGIKESDTGLAAPSQWVLDEDDIAILKAYGVRSYSISIKKAEKDVKD
                     MA"
ORIGIN      
        1 gaaacctatt gttgttcctt gtacaccatc catctccggc gacaaaaaat ttgtaaactc
       61 aagatgccga ctgacattga agacgagatc aacgacgaga agaaccttaa acctcttgat
      121 gaacatgata ttgctcttct caagacttct ggattgggac cttattccat caacattaag
      181 gaagccgaaa aggatgtgaa ggacaagccc aaaaggatca atgatttatg cggtatcaag
      241 gaatcggaca ccggtttagc tgcacctagc cagtgggtgc ttgatgaaga tgatattgct
      301 attctcaagg cttatggggt tagatcttat tccatcagca tcaagaaagc ggaaaaggat
      361 gtaaaggaca tggcctaatg gatcaatgat ttatgcggta tt
//
LOCUS       XM_071829578            2627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 45-like (LOC139839503), mRNA.
ACCESSION   XM_071829578
VERSION     XM_071829578.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2627
                     /gene="LOC139839503"
                     /note="U-box domain-containing protein 45-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139839503"
     CDS             187..2484
                     /gene="LOC139839503"
                     /codon_start=1
                     /product="U-box domain-containing protein 45-like"
                     /protein_id="XP_071685679.1"
                     /db_xref="GeneID:139839503"
                     /translation="MENSEIEESLFALGEPKLHGEMCKTLALIYVKVLSVFPELENAR
                     PRSTSGIQALCSLHIALEKAKMVLQHCAECSKIYLAITGDSVVLKFEKARSALEDGLR
                     RVEDIVPQTIGCQISEMLCELEGIKFSLYPLEKQIGDEIIGLLQQGRNFSNNSDNNEL
                     ETFHQAVSKLGITSSRAALRERRALKKLVEKARIEEDKRKESIVAYLLHLMRKYSKLF
                     RSDFSDDNDSQGSTPCSPTLYGSFEALSGTGTHAFERQLSKLSSFNFKPNFRRSGQVP
                     MPPEELRCPISLQLMFDPVIISSGQTYERICIEKWFSDGHNTCPKSQLQLSHLGLTPN
                     YCVKGLVASWCEQNGVMVPDGPPEHLDFNYWRLSLSESESVNSKSMESIGSFKYTKGI
                     KVAPFPLEENNVIKEIEGDEVAVEVEPEVNVFERYDEFLMILHTEENLRKKCRVVEKI
                     RRLLKDDEEARIYMGANGFVEALVRFLECGLNEKNKFAQESGAMALFNLAVNNNRNKE
                     MMLAAGILLLLAQMIEGSKSINSAIALYLTLSCLDEAKQIIGSSEAVPFLISVLQGTF
                     DTQCKIDSLHALYHLSSLHSNISRLISSGILTALQPYLTDLDSNSWTEKAIAVLINLA
                     VTNSGRAEIISANGLVSGLSMLLDTGEPEVQEQAVACLLILCTGSDKCCEMVLQEGVI
                     PSLVAISVNGTMKGKQNAQKLLMVFREQRQRDPLVVVQGGDKGWCECDGGDDRKVLSK
                     STSRRKMGRGWSFWRKNKSFSVYQC"
     misc_feature    1021..1179
                     /gene="LOC139839503"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; Region: RING-Ubox_PUB; cd16664"
                     /db_xref="CDD:438326"
     misc_feature    order(1024..1026,1033..1035,1039..1050,1105..1107,
                     1117..1119,1144..1146)
                     /gene="LOC139839503"
                     /note="E2 binding site [polypeptide binding]; other site"
                     /db_xref="CDD:438326"
     misc_feature    1957..2055
                     /gene="LOC139839503"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    2074..2187
                     /gene="LOC139839503"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     polyA_site      2627
                     /gene="LOC139839503"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatatctcaa ttaatttaat aatatcaaat gatgatatct ccatattttg aagtctaaat
       61 ctaaactact agtataatac aactattatt tcaattattc cagctttaat gttttttcat
      121 gaagcttccc tgtttatcac cgttatctga agtcgaagaa aattcagatt ttggggaata
      181 taaataatgg aaaattccga aatcgaagag agtttgtttg ctcttggtga accaaagcta
      241 catggagaaa tgtgcaaaac gctcgctttg atttatgtca aagtattgag cgtttttccg
      301 gagctagaaa atgctcgtcc acgtagcaca tcagggattc aggcattatg ttctttgcat
      361 atagcattag agaaagcaaa gatggttctt caacattgtg ctgaatgtag caaaatttat
      421 ttggctataa ctggagactc ggttgtcttg aaatttgaga aggcgagatc agctctcgaa
      481 gatggcctta gaagggttga agatatagtt ccgcaaacta taggatgtca gatttccgaa
      541 atgttatgcg aacttgaagg aatcaagttt tcactctatc cgttggagaa gcaaataggc
      601 gatgagataa tcgggctact tcaacaaggt agaaacttta gcaacaatag tgacaataac
      661 gaattagaaa cgttccacca agctgtatct aagctcggga ttacgtcttc acgggccgca
      721 cttcgagaaa ggcgggccct taaaaaactt gtggaaaaag cccgaatcga agaagacaaa
      781 agaaaagaat caatagtagc ttatctttta catctcatga gaaaatactc aaagttattt
      841 agaagtgatt tttcagacga taacgattca cagggctcaa caccgtgttc accaacatta
      901 tacggttctt ttgaggcttt aagtgggacc gggacccacg cttttgaaag acaactttcg
      961 aaactaagct cttttaattt taaacctaac tttcgtagat cggggcaggt acctatgccg
     1021 cccgaagaac tacgatgtcc gatttcgtta caacttatgt tcgatccggt tattatctca
     1081 tccgggcaaa cgtatgagag aatttgcatc gagaaatggt ttagtgacgg gcataacacg
     1141 tgcccgaaaa gtcaactgca gttgagtcat cttgggttga ctcctaatta ttgtgtcaag
     1201 ggtttggttg ctagttggtg cgaacaaaat ggggttatgg ttcccgatgg cccacccgag
     1261 cacctcgatt ttaactactg gcgtctctcg ttatcggaaa gtgaatcggt aaattcgaaa
     1321 tctatggaga gtatcgggtc gtttaagtat actaagggta taaaggtggc accttttcct
     1381 cttgaagaaa acaatgttat taaggagatt gaaggtgatg aggtggcggt tgaggttgag
     1441 cccgaagtta atgtgttcga aaggtacgat gagttcttga tgattttgca taccgaagag
     1501 aatttgagga aaaaatgtag agttgttgag aaaatacgac gtttgttaaa ggacgacgaa
     1561 gaggctagga tttatatggg tgcaaatggt tttgttgaag cgttggtacg ttttttggag
     1621 tgcggtttga acgaaaaaaa caagttcgct caagaaagtg gtgccatggc gctctttaac
     1681 cttgcagtca ataacaatag gaacaaagaa atgatgttag ctgctgggat acttttgtta
     1741 cttgcgcaaa tgatcgaagg ttcaaaatcg atcaactcag ccatagcatt gtacttaacc
     1801 ctttcgtgtc tagatgaagc caaacaaatc ataggttcaa gcgaggcggt cccatttcta
     1861 atttcggtcc ttcaaggcac tttcgataca caatgcaaaa tcgactcgct tcacgctctt
     1921 taccacctct catcgctcca ttctaacatc tcaagactca tatcgtccgg tatcttaacc
     1981 gcccttcaac cgtatctcac cgacttagac tccaactcat ggaccgagaa agccatagcc
     2041 gtgttaataa acttagcagt gactaattcg ggccgggctg aaatcatatc cgctaacggg
     2101 ctagttagtg ggctatcgat gttgcttgac acgggtgaac ccgaggttca agagcaggcg
     2161 gttgcttgtt tgttgatttt gtgtacggga agcgataagt gttgtgaaat ggtgcttcaa
     2221 gaaggggtga ttccttcttt agtagctatt tcggttaatg ggacgatgaa agggaaacaa
     2281 aacgcgcaaa agttgttgat ggtttttcga gagcagcggc agagggaccc actggttgtg
     2341 gtccagggtg gcgataaagg gtggtgtgag tgtgatggtg gagatgatcg gaaagtgttg
     2401 agtaaatcga catcgagacg aaagatggga agaggatgga gcttttggag gaagaacaaa
     2461 agtttttctg tgtaccaatg ttgatttctg attctcatgg gtagaaagtg taaaaagtaa
     2521 agtatttcag tttttttacc tggtggtatt ttattttgta gttttttcct ccatcacaaa
     2581 aagagattgt agagtctttg taatcagaag aattttgtct cttgtaa
//
LOCUS       XM_071829579            2386 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839504), mRNA.
ACCESSION   XM_071829579
VERSION     XM_071829579.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2386
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2386
                     /gene="LOC139839504"
                     /note="uncharacterized LOC139839504; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839504"
     CDS             696..2039
                     /gene="LOC139839504"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685680.1"
                     /db_xref="GeneID:139839504"
                     /translation="MVKPTWYNHQFVRLLVLTIILLARVSPTTQLVHKDAITHFQQYL
                     RINTAHPNPDYITAVSYLDALAKSIPNLQTQTIYLTTPQKPLLLVTFPSLNPSLPSIL
                     LNSHLDSVPAEPAKWSHPPFSAFKTDDGKIFARGAQDDKCIAIQYLEAIRNILQKDPE
                     FKPVRTVHICYVPEEEIGGLDGMAKFVESNEFKKLNVGFFLDEGQASPNYQYRVFYAD
                     RAPWHIVIKAIGVPGHGSRMYDNSAMENLMKSVEVVSKFREHQFDLVKAGIFTNSEVV
                     SANPVYLKAGISSGDGNFAMNMQPSEAEAGYDVRLPPTVDPDLLKKRISDEWAPAIRN
                     MSFHILEKGPLRDLKGRPLMTVTNESNPWWTVFKDAVETCGGKLSKPEILASTTDARY
                     VRQLGIPTFGFSPMKNTPILLHDHNEYLKDTVFLEGIKVYESIIKALSSFESAAL"
     misc_feature    798..2015
                     /gene="LOC139839504"
                     /note="Zinc peptidases M18, M20, M28, and M42; Region:
                     Zinc_peptidase_like; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 aataaaacta aaattgataa gctacccata ttaatcgtta ttaggtactg tttcatcaga
       61 attatctcac gtgcttcatc tcttacttcc ctgttcgatt tcggcgactc accggtggtg
      121 tcagtccacc tccgggatcc ggtcttctaa caccatcatc atcagcaaca acaactaatc
      181 acaggtatta aaaaccacaa atattaaatt atcaattttg ttatttctag ggtttgtatt
      241 ttataggttt ataactatat atatgcttgc tttactaaac tactacaatt tcaatgtaac
      301 atatgctttc tgattcactg ttgacttttt tggtttaagc tcattaagta ctgtagttta
      361 gccgctaact ttattgattt ttatataatc ttatttaaat aaattagtaa cagttttggt
      421 aattgcttac tgcttgttgt gttttagctt gttaaattcc ctgtttttta aagctgagtt
      481 gtgcttttgt tgaacccact ttataagcct atgcactaaa gaggtatttg tgagtgaaag
      541 ggtatgttta tgaaagctca aaattctaac tttgtgtgat tgaaatatat ttaatgagct
      601 tattgaaaag gtgagctata aaaatgtaat ttatgaaaaa tgtaactact gttgaatgct
      661 aattatttca ggttatcgct aacagagtta taaccatggt taaaccaact tggtacaacc
      721 atcagttcgt acgcctactt gtactcacaa taatcctctt agctcgtgtc tcaccaacaa
      781 cacaactagt acacaaagac gccataacac actttcaaca atacctaaga ataaacacgg
      841 cccacccaaa ccccgactac atcactgcgg tttcctatct agacgcatta gccaaatcga
      901 ttcccaatct tcaaactcaa acaatctact taaccacccc gcaaaaacct ctccttttag
      961 tcacgtttcc cagcttaaac ccgtccctac catccatcct cttaaactct cacctcgatt
     1021 cggtcccagc tgaacccgca aagtggtccc acccgccttt ttccgctttc aaaacggacg
     1081 atgggaaaat tttcgctcga ggtgcacagg atgacaaatg catcgccatt cagtacctag
     1141 aagccattag aaacatcctt caaaaagacc ctgagtttaa accggttcga acggttcata
     1201 tatgttatgt gcctgaagaa gaaattggcg ggctcgatgg gatggccaaa ttcgtagaat
     1261 ctaacgaatt taaaaaatta aacgttgggt tttttttaga cgagggacaa gcttcaccta
     1321 actatcagta ccgggttttt tatgctgaca gagcaccatg gcatattgtc attaaagcta
     1381 ttggtgtccc gggacacggt tcgcgaatgt acgataatag cgcgatggaa aatttaatga
     1441 aaagcgtcga ggttgtgtcg aaatttaggg aacatcagtt tgatttggtt aaagccggaa
     1501 tttttacaaa ctccgaggtt gtttcagcaa acccggttta tttaaaagcg ggtatttcat
     1561 ccggggacgg gaactttgcg atgaacatgc aaccgtctga ggcggaagct ggttacgatg
     1621 ttcggttacc accaaccgtt gatccggatt tgttgaaaaa acggattagt gatgaatggg
     1681 ccccagcaat taggaacatg agttttcata ttttggaaaa aggacctttg agagatttaa
     1741 agggaaggcc tttaatgact gttacaaatg aatcgaatcc atggtggacg gtttttaagg
     1801 atgctgttga aacgtgcggc gggaaacttt cgaagccgga aatattggct tcgactacag
     1861 atgctagata tgtgcgacag cttggtatac cgacgtttgg gttttctcct atgaagaaca
     1921 ccccgatatt acttcacgat cataacgagt atttgaagga tacggttttt ttggagggaa
     1981 ttaaggtcta tgaatccatc atcaaggctt tgagttcttt tgagtcagcg gcactttaat
     2041 atggtctggt acaaatacag atcgacgtaa ggtgattttg cctgaagttt gtttcgatcc
     2101 ttatatgccc atttcgtatc tcgttgttgt ataatacata cagtgtacta atacattttt
     2161 agatagtgtg ttgaaataag aaggtagtct gtatgttgca catttccagg atgttaaact
     2221 ttagcatatg acccatcatg cactgctaaa gtttacaaga catagttttg gttccctatt
     2281 agaggcatgt ttagggtcat ttgtattagc caactcaatt aggctgattt tgtgcccatg
     2341 agctgatgat atggttgaaa tgggaaaata ataccgtatt tttatt
//
LOCUS       XM_071829580             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides OVARIAN TUMOR
            DOMAIN-containing deubiquitinating enzyme 4-like (LOC139839506),
            transcript variant X1, mRNA.
ACCESSION   XM_071829580
VERSION     XM_071829580.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139839506"
                     /note="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139839506"
     CDS             42..521
                     /gene="LOC139839506"
                     /codon_start=1
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4-like isoform X1"
                     /protein_id="XP_071685681.1"
                     /db_xref="GeneID:139839506"
                     /translation="MIPVLSFHFQLSKHHILLQFLAGIRGDGRCLFRSVVLGARLRSG
                     KQVPSENVMQQLADDLRNKVVNELIKRRNETEWFVEGDFQTYISYMKRSQVWGGEPEL
                     LMSSHVLKVPIKVYMRDKKSNSIKVIAQYGQEYGSESPVSVLYHDYGHYDLLKTPLS"
     misc_feature    108..503
                     /gene="LOC139839506"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; Region:
                     OTU_plant_OTU4-like; cd22760"
                     /db_xref="CDD:438597"
     misc_feature    order(129..131,297..299,306..308,327..338,423..425,
                     429..431,474..476,486..494)
                     /gene="LOC139839506"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:438597"
ORIGIN      
        1 accatacaaa aaaacaattc accacacata agatatggaa tatgattcca gttctatcat
       61 tccactttca actgtccaaa catcatattc tccttcaatt cctagcaggt attcgtggag
      121 atggaagatg cttgtttcga tctgttgtac ttggtgctcg tttgagatca ggtaagcaag
      181 ttccatcaga gaacgttatg caacaacttg ctgatgacct aagaaacaag gttgtaaatg
      241 agttgatcaa gagacgaaat gaaaccgaat ggtttgttga aggcgatttt cagacgtata
      301 tctcatatat gaaacggtca caagtctggg gtggggaacc agaactgctt atgtcctcac
      361 atgtccttaa ggtacctatc aaggtttata tgagggataa gaagtcaaat tctatcaagg
      421 ttatagcaca atacggacaa gagtatggga gcgaaagccc agttagtgtt ctttatcatg
      481 attacggaca ctatgatctt ttaaagactc ctttaagctg atatgttaca actaagatac
      541 aatacatgat aatttgtgaa cgacgtttga agattcagat gagcgttcga agtttatcaa
      601 gatgatttac aaacgagtca aatcttacag tcattttaag ccccctaatg tacacttaat
      661 ttctttcttg accatttcca tggaaagttg taaggtgtct gtaatagggt cacactaagg
      721 tgttctactt atttctaatg agtagtattc tataaatata tatatttaat tcatatggat
      781 ggatggtact tacgg
//
LOCUS       XM_071829581             772 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides OVARIAN TUMOR
            DOMAIN-containing deubiquitinating enzyme 4-like (LOC139839506),
            transcript variant X2, mRNA.
ACCESSION   XM_071829581
VERSION     XM_071829581.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..772
                     /gene="LOC139839506"
                     /note="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139839506"
     CDS             37..498
                     /gene="LOC139839506"
                     /codon_start=1
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4-like isoform X2"
                     /protein_id="XP_071685682.1"
                     /db_xref="GeneID:139839506"
                     /translation="MSKLINNLFPTDLGVISIRGDGRCLFRSVVLGARLRSGKQVPSE
                     NVMQQLADDLRNKVVNELIKRRNETEWFVEGDFQTYISYMKRSQVWGGEPELLMSSHV
                     LKVPIKVYMRDKKSNSIKVIAQYGQEYGSESPVSVLYHDYGHYDLLKTPLS"
     misc_feature    70..480
                     /gene="LOC139839506"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; Region:
                     OTU_plant_OTU4-like; cd22760"
                     /db_xref="CDD:438597"
     misc_feature    order(106..108,274..276,283..285,304..315,400..402,
                     406..408,451..453,463..471)
                     /gene="LOC139839506"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:438597"
ORIGIN      
        1 aattaataag tttcaatcta aattttggtt acattcatgt ctaaacttat aaataatttg
       61 ttcccaactg atttgggtgt gatcagtatt cgtggagatg gaagatgctt gtttcgatct
      121 gttgtacttg gtgctcgttt gagatcaggt aagcaagttc catcagagaa cgttatgcaa
      181 caacttgctg atgacctaag aaacaaggtt gtaaatgagt tgatcaagag acgaaatgaa
      241 accgaatggt ttgttgaagg cgattttcag acgtatatct catatatgaa acggtcacaa
      301 gtctggggtg gggaaccaga actgcttatg tcctcacatg tccttaaggt acctatcaag
      361 gtttatatga gggataagaa gtcaaattct atcaaggtta tagcacaata cggacaagag
      421 tatgggagcg aaagcccagt tagtgttctt tatcatgatt acggacacta tgatctttta
      481 aagactcctt taagctgata tgttacaact aagatacaat acatgataat ttgtgaacga
      541 cgtttgaaga ttcagatgag cgttcgaagt ttatcaagat gatttacaaa cgagtcaaat
      601 cttacagtca ttttaagccc cctaatgtac acttaatttc tttcttgacc atttccatgg
      661 aaagttgtaa ggtgtctgta atagggtcac actaaggtgt tctacttatt tctaatgagt
      721 agtattctat aaatatatat atttaattca tatggatgga tggtacttac gg
//
LOCUS       XM_071829582            2444 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine protein
            phosphatase 2A regulatory subunit B''beta-like (LOC139839507),
            mRNA.
ACCESSION   XM_071829582
VERSION     XM_071829582.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2444
                     /gene="LOC139839507"
                     /note="serine/threonine protein phosphatase 2A regulatory
                     subunit B''beta-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 24 Proteins"
                     /db_xref="GeneID:139839507"
     CDS             363..1985
                     /gene="LOC139839507"
                     /codon_start=1
                     /product="serine/threonine protein phosphatase 2A
                     regulatory subunit B''beta-like"
                     /protein_id="XP_071685683.1"
                     /db_xref="GeneID:139839507"
                     /translation="MDMDYNGESGFLDPELLQLNEVSPLAIKSNPYVAEKLFEQWLSL
                     PETNLLVKSLFNNVKAGVPLNVSGSVSSPKASPGSSIPSMFPAGSAPPLSPRSSSSGS
                     PRISKHRAGPSILGSPLRVLSEPVKELIPQFYFQNGRPPPNELKERCLFRSTQFFYGH
                     PDGLQLNEFKPLTKEICKLPSFFSSALFKKIDVEGTGLVTRDAFVNYWVNGNMLIKDV
                     ATQIYTILKQPDLRYLTQEDFKPILRELLTTHPGLEFLQSTPEFQERYAETVIYRIFY
                     YMNRAGNSRLTLRELKRGNLIAAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTD
                     HDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSNVEGKMGYEDFVYFILAEEDKS
                     SEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIVDMIG
                     PKDDGYFTLRDLKGTKLSGSVFNILFNLNKFMAFETRDPFLIRQERENPTLTEWDRFA
                     HREYIRLSMEEDAEDASNGSADVWDESLEAPF"
     misc_feature    984..1805
                     /gene="LOC139839507"
                     /note="serine/threonine protein phosphatase 2A regulatory
                     subunit B' alpha and beta subunits, and similar proteins;
                     Region: PPP2R3A_B-like; cd21504"
                     /db_xref="CDD:410337"
     polyA_site      2444
                     /gene="LOC139839507"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aataattttt cacacatcac gttctctctc tatctgtttt ccaatcttgc tcatgcaaag
       61 aatcttaaat ctttcaaatt atttccacct tttactccac ccttcgatcc tctgataata
      121 attcagacaa caaatcccaa ttccaaactt tcaatttcaa gaatccatct cctcgatttt
      181 gtcacatacc caattcggaa ccgggaccta atgcaattga tttgatttca aaagaaactg
      241 attgatgtac aaaaagggtt actagggtta actgatcttt gtggggtttc taataagaga
      301 tctgaatgat agattgtgat tgcagtggtt gataaaaaaa ggattttttt caagaaaaaa
      361 atatggatat ggattataat ggggaatcgg gttttcttga cccggaattg ttgcagctga
      421 atgaagtgtc tcctttggct attaagtcta atccttatgt tgctgagaag ctttttgaac
      481 aatggctttc tcttcctgaa accaacctct tggtgaaatc tttgtttaat aatgttaaag
      541 cgggtgttcc attaaatgtt tcgggatcag tttcgagtcc aaaagcttct ccagggagtt
      601 cgataccttc gatgtttcca gccggtagcg cacctccact ttcaccaaga agctcctcgt
      661 ctggttctcc tcgtatcagc aaacacaggg cgggcccctc aatattaggc tctcctttaa
      721 gagttttgag tgagcccgtc aaagagttaa tacctcagtt ctactttcag aatgggcgtc
      781 caccccctaa cgaattaaaa gagcgatgtc tgttcagaag tactcagttt ttttacggtc
      841 acccggatgg attacaattg aatgaattca agccacttac aaaagagatt tgcaaattgc
      901 catcgttctt ctccagtgca ctatttaaaa agattgacgt ggaaggaact ggtcttgtaa
      961 ccagggatgc atttgttaat tactgggtca atggcaacat gttgataaaa gatgttgcga
     1021 cccagatata tacaatattg aagcagcctg atttaagata tctaactcag gaggacttta
     1081 aacccattct ccgtgaacta ttgacaactc atccaggttt agagttctta cagagcacac
     1141 ccgagtttca agagagatac gctgaaacgg taatatacag aatattttac tacatgaata
     1201 gagcgggaaa ttctcgactt accctcaggg agctaaaacg tggaaattta attgctgcaa
     1261 tgcaacatgc tgatgaagaa gaggacataa acaaagtttt aagatatttc tcttatgagc
     1321 acttctatgt aatatattgc aagttttggg agctggacac agatcatgat ttcctgatag
     1381 ataaagagaa ccttatacga tatggtaatc atgctctcac gtacagaatt gttgaccgaa
     1441 tattctcaca ggtaccacgc aagttcacaa gtaatgttga agggaaaatg ggatatgaag
     1501 atttcgttta tttcattttg gccgaagagg ataaatcatc agagcctagt ctcgagtact
     1561 ggttcaaatg catagatttg gacggaaatg gagtgattac gaggaacgag atgcaattct
     1621 tttacgaaga gcagctgcat cggatggaat gcatggctca agagcctgtc ctttttgagg
     1681 acattttgtg tcagatcgtt gacatgattg gaccaaagga tgatgggtat tttaccttac
     1741 gtgacttaaa aggaaccaaa ctttccggta gtgtattcaa tatccttttc aaccttaata
     1801 agttcatggc ctttgaaact cgcgatccgt ttctcatacg tcaggagcgt gagaatccta
     1861 cattgactga atgggatcgg tttgcacatc gggagtatat tcggctctca atggaagaag
     1921 atgctgaaga tgcttctaat gggagtgcag atgtttggga cgaatctctt gaggccccgt
     1981 tttagattac ggtcaataaa ctgctcgtta tggtgatagt gaagaatttg ttagattaag
     2041 ttgtgagcaa cagaaagcat gtaatttttt tggaattgag caccgagtat gctcaaagat
     2101 ctgtgttttc gttggtaaaa agcgaaagaa agtaagagtt tcgagttgca attgcatgct
     2161 taatggaaga agttactcag gtgctttaat tggaagcatt agattattgt tttggcaact
     2221 tatgatcatt agcatttccc atttgattga aggtttattt agcttaaaaa aaagcatatt
     2281 ccctttgatt agttgtttta attttacttc taccaataga tgtttggctt tttgtttttt
     2341 ggtttacaat ttgtgcatca atcattttct gttaagatga ggttgtagct taacgttgga
     2401 tcttaaattc ttatctttga tagcagttat ggtttcctgg tgta
//
LOCUS       XM_071829583            2871 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839508), transcript variant X1, mRNA.
ACCESSION   XM_071829583
VERSION     XM_071829583.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2871
                     /gene="LOC139839508"
                     /note="uncharacterized LOC139839508; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839508"
     CDS             187..570
                     /gene="LOC139839508"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685684.1"
                     /db_xref="GeneID:139839508"
                     /translation="MSNPRTRSRSNKHRLAHLLNLITKFVSQGMESDSSDELFELKGS
                     TVDRKFFELESPATPHNTPEMDCYVCVSDFVDDKTVSSKPKIKGKETITETLLPLGKH
                     AIVKPKESEIHHVLPPKHGKHAVTE"
ORIGIN      
        1 acaccaaaac aaactctcaa aatactgata caaaaacatc accgtaagag gaacaaaaat
       61 gtgcaagcac tcaacagaat tagggttcgc aaaaattgtt atgtaccgaa gcatttaagc
      121 agatgcaatt agggtttgca aaatcaaaat gaatattgga tgcgttgacc acacttgata
      181 acttagatga gcaatccaag aacacgaagc agatccaata agcatcgatt ggcacatttg
      241 ctgaatctga ttaccaagtt tgtaagccag gggatggaat ctgatagttc ggatgagtta
      301 tttgagctta aaggctcaac tgtcgatcgc aagttttttg agcttgaaag cccagctact
      361 cctcacaaca ccccagagat ggattgctat gtgtgtgttt ctgattttgt tgatgacaaa
      421 actgtttcta gtaagcctaa aatcaagggg aaagagacaa tcactgagac tctactacca
      481 ttaggcaaac atgcaattgt taagccaaag gagtctgaga tccaccatgt actaccacca
      541 aaacatggca aacatgctgt tactgagtaa tattattttt ttattttatt tttaattttg
      601 tcatgatttt tttaatgtaa tttgtgatct ttttttcaat gaactaatca gtggggagct
      661 ttcgtttagg gtttataata aggaagggac gggccacgtg taagtttgct aataatggtt
      721 ttttagcaat gaatttgaag tgagcattat acttggcgaa cgggtagggt tgggtcagtt
      781 tgggtaatgg gtaaaaatat taaatgggtc caattgggtc aaataggtct tttactatat
      841 acatttataa tattatttta gtgatgatgt tgggtacctt tcaaagttaa tccatcataa
      901 tcgaatgaga cacgtgcagc atgcaaactt gccatctcaa cctgaaacgc gtgcgactgc
      961 aatcaggtat gtttgcttgt gtaagaataa tggttgttgt tttaaagggt atataaccat
     1021 attgatatct ttattattat atttatatat ttttattaat taattaatgt gtgttataca
     1081 ggaaactttg tttgttgatt tcttgcaaat gcaacaaacg taaagtcgat gcggaagcag
     1141 agtcccgtgc tgctatcagt gaagtccttg ctcaggttaa ggcagaatct aaggcccaag
     1201 caaaatttag ggaagatctt cgagtcgaac acagcaggtt tctgatggag tatcagcgtg
     1261 agaagcaatt tgtagagaac atggtgactg atttgcatct aaaaacatga catgatgtgt
     1321 gagtcatgtt taaagacatg gatatctttg aggctgaagc ccgtgctaag cttggacaac
     1381 agctcaatga cagattggta gcccaaacaa gggaatttcg tgatgagagg cgcgttttaa
     1441 aagagttgct gttaaaatca agttataatg ctgctgaagc ttcactatca ctccagatta
     1501 tgtaagtttt ttttgttaaa tttattcaga ttactttaat ttgcacatga cagtttagcc
     1561 aaaaattgat aaacttttaa ttggtttaaa tcttccaatc tagttatgtc tttacaggaa
     1621 caattgaaac caattgaaag cttatcaatt tttggctaaa ctgccatgtg tagattaaag
     1681 taatctgaat aaatttaaca aaaaaactta cataatctgg agtaatagtg aagcttcagc
     1741 agcgttaaaa cttgatctta acatcagctc ttttaaaacg cgcctctctt cagaaaattc
     1801 ccttatttgg gctaccaatc tgtcattgag ctgttgtcca agcagtgcac gggcatcagc
     1861 ctcaaatatt tccctatcat gaaacatgtc ttgcacatca ttctttgttt ttaaatacaa
     1921 accagtcatc atattctata cagattgctt ctcacgctga tactccatca gaaaactgtt
     1981 gtaatcgatt cgaagatctt ccctaaattt ttcttgggcc ttagatttta ccttgacctg
     2041 ggcaaggact tcactgataa catcacggga cactgcttca gcattggctt tacgtttgtt
     2101 gcatttgcaa gaaatcaaca aacaaagttt cctgtataac acacattaat taattaataa
     2161 aaatatataa atctaataat aaagatatca atatggttat atacccttta aaacgacaaa
     2221 cattattctt acacaagcaa acatacttga ttgcagtcac acgcgtttca ggttgagatg
     2281 acaagtttgc atgttgcacg tgtctcattc gattctgatg gattaacttt gaaaggtacc
     2341 ccacatcatc actgaaataa tataataaat gtatatagta aaagacccat ttgacccaat
     2401 tggacccatt taatattttt acccattacc caaactgacc caaccctacc cgttcgccaa
     2461 gtataatgct cacttcaaat tcattgctaa aaaaccatta ttggcaaact tacacgtggc
     2521 ccgtcccttc cttattataa accctaaacg aaagctcccc actgatctgt tcattgaaaa
     2581 aaagatcaca aattacatta aaaaaaatca tgacaaaata aaataaaaaa ataatattac
     2641 tcagtaacag catgtttgcc atgttttggt ggtagtacat ggtggagatc tgagactcct
     2701 ttggcttaat gcaattaatc atataaaaac atatttattc gctactaatt taaaaattaa
     2761 aaattacttt tacgcatgac aggagcttaa tagtaattat aaaaacatta acctatgtac
     2821 actatagcat aatttccttt tttaattgca actttaaaac gttttagttt t
//
LOCUS       XR_011756973            2756 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839508), transcript variant X2, misc_RNA.
ACCESSION   XR_011756973
VERSION     XR_011756973.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2756
                     /gene="LOC139839508"
                     /note="uncharacterized LOC139839508; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839508"
     misc_RNA        1..2756
                     /gene="LOC139839508"
                     /product="uncharacterized protein, transcript variant X2"
                     /db_xref="GeneID:139839508"
ORIGIN      
        1 acaccaaaac aaactctcaa aatactgata caaaaacatc accgtaagag gaacaaaaat
       61 gtgcaagcac tcaacagaat tagggttcgc aaaaattgtt atgtaccgaa gcatttaagc
      121 agatgcaatt agggtttgca aaatcaaaat gaatattgga tgcgttgacc acacttgata
      181 acttagatga gcaatccaag aacacgaagc agatccaata agcatcgatt ggcacatttg
      241 ctgaatctga ttaccaagtt tgtaagccag gggatggaat ctgatagttc ggatgagtta
      301 tttgagctta aaggctcaac tgtcgatcgc aagttttttg agcttgaaag cccagctact
      361 cctcacaaca ccccagagat ggattgctat gtgtgtgttt ctgattttgt tgatgacaaa
      421 actgtttcta gtaagcctaa aatcaagggg aaagagacaa tcactgagac tctactacca
      481 ttaggcaaac atgcaattgt taagccaaag gagtctgaga tccaccatgt actaccacca
      541 aaacatggca aacatgctgt tactgagtaa tattattttt ttattttatt tttaattttg
      601 tcatgatttt tttaatgtaa tttgtgatct ttttttcaat gaactaatca gtggggagct
      661 ttcgtttagg gtttataata aggaagggac gggccacgtg taagtttgct aataatggtt
      721 ttttagcaat gaatttgaag tgagcattat acttggcgaa cgggtagggt tgggtcagtt
      781 tgggtaatgg gtaaaaatat taaatgggtc caattgggtc aaataggtct tttactatat
      841 acatttataa tattatttta gtgatgatgt tgggtacctt tcaaagttaa tccatcataa
      901 tcgaatgaga cacgtgcagc atgcaaactt gccatctcaa cctgaaacgc gtgcgactgc
      961 aatcaggaaa ctttgtttgt tgatttcttg caaatgcaac aaacgtaaag tcgatgcgga
     1021 agcagagtcc cgtgctgcta tcagtgaagt ccttgctcag gttaaggcag aatctaaggc
     1081 ccaagcaaaa tttagggaag atcttcgagt cgaacacagc aggtttctga tggagtatca
     1141 gcgtgagaag caatttgtag agaacatggt gactgatttg catctaaaaa catgacatga
     1201 tgtgtgagtc atgtttaaag acatggatat ctttgaggct gaagcccgtg ctaagcttgg
     1261 acaacagctc aatgacagat tggtagccca aacaagggaa tttcgtgatg agaggcgcgt
     1321 tttaaaagag ttgctgttaa aatcaagtta taatgctgct gaagcttcac tatcactcca
     1381 gattatgtaa gttttttttg ttaaatttat tcagattact ttaatttgca catgacagtt
     1441 tagccaaaaa ttgataaact tttaattggt ttaaatcttc caatctagtt atgtctttac
     1501 aggaacaatt gaaaccaatt gaaagcttat caatttttgg ctaaactgcc atgtgtagat
     1561 taaagtaatc tgaataaatt taacaaaaaa acttacataa tctggagtaa tagtgaagct
     1621 tcagcagcgt taaaacttga tcttaacatc agctctttta aaacgcgcct ctcttcagaa
     1681 aattccctta tttgggctac caatctgtca ttgagctgtt gtccaagcag tgcacgggca
     1741 tcagcctcaa atatttccct atcatgaaac atgtcttgca catcattctt tgtttttaaa
     1801 tacaaaccag tcatcatatt ctatacagat tgcttctcac gctgatactc catcagaaaa
     1861 ctgttgtaat cgattcgaag atcttcccta aatttttctt gggccttaga ttttaccttg
     1921 acctgggcaa ggacttcact gataacatca cgggacactg cttcagcatt ggctttacgt
     1981 ttgttgcatt tgcaagaaat caacaaacaa agtttcctgt ataacacaca ttaattaatt
     2041 aataaaaata tataaatcta ataataaaga tatcaatatg gttatatacc ctttaaaacg
     2101 acaaacatta ttcttacaca agcaaacata cttgattgca gtcacacgcg tttcaggttg
     2161 agatgacaag tttgcatgtt gcacgtgtct cattcgattc tgatggatta actttgaaag
     2221 gtaccccaca tcatcactga aataatataa taaatgtata tagtaaaaga cccatttgac
     2281 ccaattggac ccatttaata tttttaccca ttacccaaac tgacccaacc ctacccgttc
     2341 gccaagtata atgctcactt caaattcatt gctaaaaaac cattattggc aaacttacac
     2401 gtggcccgtc ccttccttat tataaaccct aaacgaaagc tccccactga tctgttcatt
     2461 gaaaaaaaga tcacaaatta cattaaaaaa aatcatgaca aaataaaata aaaaaataat
     2521 attactcagt aacagcatgt ttgccatgtt ttggtggtag tacatggtgg agatctgaga
     2581 ctcctttggc ttaatgcaat taatcatata aaaacatatt tattcgctac taatttaaaa
     2641 attaaaaatt acttttacgc atgacaggag cttaatagta attataaaaa cattaaccta
     2701 tgtacactat agcataattt ccttttttaa ttgcaacttt aaaacgtttt agtttt
//
LOCUS       XM_071829584            3145 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839508), transcript variant X3, mRNA.
ACCESSION   XM_071829584
VERSION     XM_071829584.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3145
                     /gene="LOC139839508"
                     /note="uncharacterized LOC139839508; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839508"
     CDS             548..844
                     /gene="LOC139839508"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685685.1"
                     /db_xref="GeneID:139839508"
                     /translation="MESDSSDELFELKGSTVDRKFFELESPATPHNTPEMDCYVCVSD
                     FVDDKTVSSKPKIKGKETITETLLPLGKHAIVKPKESEIHHVLPPKHGKHAVTE"
ORIGIN      
        1 acaccaaaac aaactctcaa aatactgata caaaaacatc accgtaagag gaacaaaaat
       61 gtgcaagcac tcaacagaat tagggttcgc aaaaattgtt atgtaccgaa gcatttaagc
      121 agatgcaatt agggtttgca aaatcaaaat gaatattgga tgcgttgacc acacttgata
      181 acttagatga gcaatccaag aacacgaagc agatccaata agcatcgatt ggcacatttg
      241 ctgaatctga ttacagtata aataaagttg tatgggtcga gctcgagtat ggctgcaact
      301 ggtgtgcccg cattagatgt aatcaagaca atatttcaaa tacatggtcg accagaaccg
      361 atgtacacac caggataatg aaagtagtca actcaatatt gctttaattc aggaactata
      421 caataacaat cgtaatgaaa gtgctgaaat actcatattc gtctgtagat aactttgtca
      481 tttagtcaca aggtgttcga tattgataaa atgttgcaag tgcttcagca agtttgtaag
      541 ccaggggatg gaatctgata gttcggatga gttatttgag cttaaaggct caactgtcga
      601 tcgcaagttt tttgagcttg aaagcccagc tactcctcac aacaccccag agatggattg
      661 ctatgtgtgt gtttctgatt ttgttgatga caaaactgtt tctagtaagc ctaaaatcaa
      721 ggggaaagag acaatcactg agactctact accattaggc aaacatgcaa ttgttaagcc
      781 aaaggagtct gagatccacc atgtactacc accaaaacat ggcaaacatg ctgttactga
      841 gtaatattat ttttttattt tatttttaat tttgtcatga tttttttaat gtaatttgtg
      901 atcttttttt caatgaacta atcagtgggg agctttcgtt tagggtttat aataaggaag
      961 ggacgggcca cgtgtaagtt tgctaataat ggttttttag caatgaattt gaagtgagca
     1021 ttatacttgg cgaacgggta gggttgggtc agtttgggta atgggtaaaa atattaaatg
     1081 ggtccaattg ggtcaaatag gtcttttact atatacattt ataatattat tttagtgatg
     1141 atgttgggta cctttcaaag ttaatccatc ataatcgaat gagacacgtg cagcatgcaa
     1201 acttgccatc tcaacctgaa acgcgtgcga ctgcaatcag gtatgtttgc ttgtgtaaga
     1261 ataatggttg ttgttttaaa gggtatataa ccatattgat atctttatta ttatatttat
     1321 atatttttat taattaatta atgtgtgtta tacaggaaac tttgtttgtt gatttcttgc
     1381 aaatgcaaca aacgtaaagt cgatgcggaa gcagagtccc gtgctgctat cagtgaagtc
     1441 cttgctcagg ttaaggcaga atctaaggcc caagcaaaat ttagggaaga tcttcgagtc
     1501 gaacacagca ggtttctgat ggagtatcag cgtgagaagc aatttgtaga gaacatggtg
     1561 actgatttgc atctaaaaac atgacatgat gtgtgagtca tgtttaaaga catggatatc
     1621 tttgaggctg aagcccgtgc taagcttgga caacagctca atgacagatt ggtagcccaa
     1681 acaagggaat ttcgtgatga gaggcgcgtt ttaaaagagt tgctgttaaa atcaagttat
     1741 aatgctgctg aagcttcact atcactccag attatgtaag ttttttttgt taaatttatt
     1801 cagattactt taatttgcac atgacagttt agccaaaaat tgataaactt ttaattggtt
     1861 taaatcttcc aatctagtta tgtctttaca ggaacaattg aaaccaattg aaagcttatc
     1921 aatttttggc taaactgcca tgtgtagatt aaagtaatct gaataaattt aacaaaaaaa
     1981 cttacataat ctggagtaat agtgaagctt cagcagcgtt aaaacttgat cttaacatca
     2041 gctcttttaa aacgcgcctc tcttcagaaa attcccttat ttgggctacc aatctgtcat
     2101 tgagctgttg tccaagcagt gcacgggcat cagcctcaaa tatttcccta tcatgaaaca
     2161 tgtcttgcac atcattcttt gtttttaaat acaaaccagt catcatattc tatacagatt
     2221 gcttctcacg ctgatactcc atcagaaaac tgttgtaatc gattcgaaga tcttccctaa
     2281 atttttcttg ggccttagat tttaccttga cctgggcaag gacttcactg ataacatcac
     2341 gggacactgc ttcagcattg gctttacgtt tgttgcattt gcaagaaatc aacaaacaaa
     2401 gtttcctgta taacacacat taattaatta ataaaaatat ataaatctaa taataaagat
     2461 atcaatatgg ttatataccc tttaaaacga caaacattat tcttacacaa gcaaacatac
     2521 ttgattgcag tcacacgcgt ttcaggttga gatgacaagt ttgcatgttg cacgtgtctc
     2581 attcgattct gatggattaa ctttgaaagg taccccacat catcactgaa ataatataat
     2641 aaatgtatat agtaaaagac ccatttgacc caattggacc catttaatat ttttacccat
     2701 tacccaaact gacccaaccc tacccgttcg ccaagtataa tgctcacttc aaattcattg
     2761 ctaaaaaacc attattggca aacttacacg tggcccgtcc cttccttatt ataaacccta
     2821 aacgaaagct ccccactgat ctgttcattg aaaaaaagat cacaaattac attaaaaaaa
     2881 atcatgacaa aataaaataa aaaaataata ttactcagta acagcatgtt tgccatgttt
     2941 tggtggtagt acatggtgga gatctgagac tcctttggct taatgcaatt aatcatataa
     3001 aaacatattt attcgctact aatttaaaaa ttaaaaatta cttttacgca tgacaggagc
     3061 ttaatagtaa ttataaaaac attaacctat gtacactata gcataatttc cttttttaat
     3121 tgcaacttta aaacgtttta gtttt
//
LOCUS       XM_071829585            3194 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839508), transcript variant X4, mRNA.
ACCESSION   XM_071829585
VERSION     XM_071829585.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3194
                     /gene="LOC139839508"
                     /note="uncharacterized LOC139839508; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839508"
     CDS             597..893
                     /gene="LOC139839508"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685686.1"
                     /db_xref="GeneID:139839508"
                     /translation="MESDSSDELFELKGSTVDRKFFELESPATPHNTPEMDCYVCVSD
                     FVDDKTVSSKPKIKGKETITETLLPLGKHAIVKPKESEIHHVLPPKHGKHAVTE"
ORIGIN      
        1 acaccaaaac aaactctcaa aatactgata caaaaacatc accgtaagag gaacaaaaat
       61 gtgcaagcac tcaacagaat tagggttcgc aaaaattgtt atgtaccgaa gcatttaagc
      121 agatgcaatt agggtttgca aaatcaaaat gaatattgga tgcgttgacc acacttgata
      181 acttagatga gcaatccaag aacacgaagc agatccaata agcatcgatt ggcacatttg
      241 ctgaatctga ttacgtattg tctcttatcc tttaatagct attagtcaaa gagattcatt
      301 tggcttttat aaagtcaaat tcatttgact ttataatgtc gagcgtacta attttttaat
      361 ttagattgat gggatatttt ttgcttagag tataaataaa gttgtatggg tcgagctcga
      421 gtatggctgc aactggtgtg cccgcattag atgtaatcaa gacaatattt caaatacatg
      481 gtcgaccaga accgatgtac acaccaggat aatgaaaata actttgtcat ttagtcacaa
      541 ggtgttcgat attgataaaa tgttgcaagt gcttcagcaa gtttgtaagc caggggatgg
      601 aatctgatag ttcggatgag ttatttgagc ttaaaggctc aactgtcgat cgcaagtttt
      661 ttgagcttga aagcccagct actcctcaca acaccccaga gatggattgc tatgtgtgtg
      721 tttctgattt tgttgatgac aaaactgttt ctagtaagcc taaaatcaag gggaaagaga
      781 caatcactga gactctacta ccattaggca aacatgcaat tgttaagcca aaggagtctg
      841 agatccacca tgtactacca ccaaaacatg gcaaacatgc tgttactgag taatattatt
      901 tttttatttt atttttaatt ttgtcatgat ttttttaatg taatttgtga tctttttttc
      961 aatgaactaa tcagtgggga gctttcgttt agggtttata ataaggaagg gacgggccac
     1021 gtgtaagttt gctaataatg gttttttagc aatgaatttg aagtgagcat tatacttggc
     1081 gaacgggtag ggttgggtca gtttgggtaa tgggtaaaaa tattaaatgg gtccaattgg
     1141 gtcaaatagg tcttttacta tatacattta taatattatt ttagtgatga tgttgggtac
     1201 ctttcaaagt taatccatca taatcgaatg agacacgtgc agcatgcaaa cttgccatct
     1261 caacctgaaa cgcgtgcgac tgcaatcagg tatgtttgct tgtgtaagaa taatggttgt
     1321 tgttttaaag ggtatataac catattgata tctttattat tatatttata tatttttatt
     1381 aattaattaa tgtgtgttat acaggaaact ttgtttgttg atttcttgca aatgcaacaa
     1441 acgtaaagtc gatgcggaag cagagtcccg tgctgctatc agtgaagtcc ttgctcaggt
     1501 taaggcagaa tctaaggccc aagcaaaatt tagggaagat cttcgagtcg aacacagcag
     1561 gtttctgatg gagtatcagc gtgagaagca atttgtagag aacatggtga ctgatttgca
     1621 tctaaaaaca tgacatgatg tgtgagtcat gtttaaagac atggatatct ttgaggctga
     1681 agcccgtgct aagcttggac aacagctcaa tgacagattg gtagcccaaa caagggaatt
     1741 tcgtgatgag aggcgcgttt taaaagagtt gctgttaaaa tcaagttata atgctgctga
     1801 agcttcacta tcactccaga ttatgtaagt tttttttgtt aaatttattc agattacttt
     1861 aatttgcaca tgacagttta gccaaaaatt gataaacttt taattggttt aaatcttcca
     1921 atctagttat gtctttacag gaacaattga aaccaattga aagcttatca atttttggct
     1981 aaactgccat gtgtagatta aagtaatctg aataaattta acaaaaaaac ttacataatc
     2041 tggagtaata gtgaagcttc agcagcgtta aaacttgatc ttaacatcag ctcttttaaa
     2101 acgcgcctct cttcagaaaa ttcccttatt tgggctacca atctgtcatt gagctgttgt
     2161 ccaagcagtg cacgggcatc agcctcaaat atttccctat catgaaacat gtcttgcaca
     2221 tcattctttg tttttaaata caaaccagtc atcatattct atacagattg cttctcacgc
     2281 tgatactcca tcagaaaact gttgtaatcg attcgaagat cttccctaaa tttttcttgg
     2341 gccttagatt ttaccttgac ctgggcaagg acttcactga taacatcacg ggacactgct
     2401 tcagcattgg ctttacgttt gttgcatttg caagaaatca acaaacaaag tttcctgtat
     2461 aacacacatt aattaattaa taaaaatata taaatctaat aataaagata tcaatatggt
     2521 tatataccct ttaaaacgac aaacattatt cttacacaag caaacatact tgattgcagt
     2581 cacacgcgtt tcaggttgag atgacaagtt tgcatgttgc acgtgtctca ttcgattctg
     2641 atggattaac tttgaaaggt accccacatc atcactgaaa taatataata aatgtatata
     2701 gtaaaagacc catttgaccc aattggaccc atttaatatt tttacccatt acccaaactg
     2761 acccaaccct acccgttcgc caagtataat gctcacttca aattcattgc taaaaaacca
     2821 ttattggcaa acttacacgt ggcccgtccc ttccttatta taaaccctaa acgaaagctc
     2881 cccactgatc tgttcattga aaaaaagatc acaaattaca ttaaaaaaaa tcatgacaaa
     2941 ataaaataaa aaaataatat tactcagtaa cagcatgttt gccatgtttt ggtggtagta
     3001 catggtggag atctgagact cctttggctt aatgcaatta atcatataaa aacatattta
     3061 ttcgctacta atttaaaaat taaaaattac ttttacgcat gacaggagct taatagtaat
     3121 tataaaaaca ttaacctatg tacactatag cataatttcc ttttttaatt gcaactttaa
     3181 aacgttttag tttt
//
LOCUS       XM_071829586            3019 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839508), transcript variant X5, mRNA.
ACCESSION   XM_071829586
VERSION     XM_071829586.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3019
                     /gene="LOC139839508"
                     /note="uncharacterized LOC139839508; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839508"
     CDS             422..718
                     /gene="LOC139839508"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685687.1"
                     /db_xref="GeneID:139839508"
                     /translation="MESDSSDELFELKGSTVDRKFFELESPATPHNTPEMDCYVCVSD
                     FVDDKTVSSKPKIKGKETITETLLPLGKHAIVKPKESEIHHVLPPKHGKHAVTE"
ORIGIN      
        1 gaatattgga tgcgttgacc acacttgata acttagatga gcaatccaag aacacgaagc
       61 agatccaata agcatcgatt ggcacatttg ctgaatctga ttacattgat gggatatttt
      121 ttgcttagag tataaataaa gttgtatggg tcgagctcga gtatggctgc aactggtgtg
      181 cccgcattag atgtaatcaa gacaatattt caaatacatg gtcgaccaga accgatgtac
      241 acaccaggat aatgaaagta gtcaactcaa tattgcttta attcaggaac tatacaataa
      301 caatcgtaat gaaagtgctg aaatactcat attcgtctgt agataacttt gtcatttagt
      361 cacaaggtgt tcgatattga taaaatgttg caagtgcttc agcaagtttg taagccaggg
      421 gatggaatct gatagttcgg atgagttatt tgagcttaaa ggctcaactg tcgatcgcaa
      481 gttttttgag cttgaaagcc cagctactcc tcacaacacc ccagagatgg attgctatgt
      541 gtgtgtttct gattttgttg atgacaaaac tgtttctagt aagcctaaaa tcaaggggaa
      601 agagacaatc actgagactc tactaccatt aggcaaacat gcaattgtta agccaaagga
      661 gtctgagatc caccatgtac taccaccaaa acatggcaaa catgctgtta ctgagtaata
      721 ttattttttt attttatttt taattttgtc atgatttttt taatgtaatt tgtgatcttt
      781 ttttcaatga actaatcagt ggggagcttt cgtttagggt ttataataag gaagggacgg
      841 gccacgtgta agtttgctaa taatggtttt ttagcaatga atttgaagtg agcattatac
      901 ttggcgaacg ggtagggttg ggtcagtttg ggtaatgggt aaaaatatta aatgggtcca
      961 attgggtcaa ataggtcttt tactatatac atttataata ttattttagt gatgatgttg
     1021 ggtacctttc aaagttaatc catcataatc gaatgagaca cgtgcagcat gcaaacttgc
     1081 catctcaacc tgaaacgcgt gcgactgcaa tcaggtatgt ttgcttgtgt aagaataatg
     1141 gttgttgttt taaagggtat ataaccatat tgatatcttt attattatat ttatatattt
     1201 ttattaatta attaatgtgt gttatacagg aaactttgtt tgttgatttc ttgcaaatgc
     1261 aacaaacgta aagtcgatgc ggaagcagag tcccgtgctg ctatcagtga agtccttgct
     1321 caggttaagg cagaatctaa ggcccaagca aaatttaggg aagatcttcg agtcgaacac
     1381 agcaggtttc tgatggagta tcagcgtgag aagcaatttg tagagaacat ggtgactgat
     1441 ttgcatctaa aaacatgaca tgatgtgtga gtcatgttta aagacatgga tatctttgag
     1501 gctgaagccc gtgctaagct tggacaacag ctcaatgaca gattggtagc ccaaacaagg
     1561 gaatttcgtg atgagaggcg cgttttaaaa gagttgctgt taaaatcaag ttataatgct
     1621 gctgaagctt cactatcact ccagattatg taagtttttt ttgttaaatt tattcagatt
     1681 actttaattt gcacatgaca gtttagccaa aaattgataa acttttaatt ggtttaaatc
     1741 ttccaatcta gttatgtctt tacaggaaca attgaaacca attgaaagct tatcaatttt
     1801 tggctaaact gccatgtgta gattaaagta atctgaataa atttaacaaa aaaacttaca
     1861 taatctggag taatagtgaa gcttcagcag cgttaaaact tgatcttaac atcagctctt
     1921 ttaaaacgcg cctctcttca gaaaattccc ttatttgggc taccaatctg tcattgagct
     1981 gttgtccaag cagtgcacgg gcatcagcct caaatatttc cctatcatga aacatgtctt
     2041 gcacatcatt ctttgttttt aaatacaaac cagtcatcat attctataca gattgcttct
     2101 cacgctgata ctccatcaga aaactgttgt aatcgattcg aagatcttcc ctaaattttt
     2161 cttgggcctt agattttacc ttgacctggg caaggacttc actgataaca tcacgggaca
     2221 ctgcttcagc attggcttta cgtttgttgc atttgcaaga aatcaacaaa caaagtttcc
     2281 tgtataacac acattaatta attaataaaa atatataaat ctaataataa agatatcaat
     2341 atggttatat accctttaaa acgacaaaca ttattcttac acaagcaaac atacttgatt
     2401 gcagtcacac gcgtttcagg ttgagatgac aagtttgcat gttgcacgtg tctcattcga
     2461 ttctgatgga ttaactttga aaggtacccc acatcatcac tgaaataata taataaatgt
     2521 atatagtaaa agacccattt gacccaattg gacccattta atatttttac ccattaccca
     2581 aactgaccca accctacccg ttcgccaagt ataatgctca cttcaaattc attgctaaaa
     2641 aaccattatt ggcaaactta cacgtggccc gtcccttcct tattataaac cctaaacgaa
     2701 agctccccac tgatctgttc attgaaaaaa agatcacaaa ttacattaaa aaaaatcatg
     2761 acaaaataaa ataaaaaaat aatattactc agtaacagca tgtttgccat gttttggtgg
     2821 tagtacatgg tggagatctg agactccttt ggcttaatgc aattaatcat ataaaaacat
     2881 atttattcgc tactaattta aaaattaaaa attactttta cgcatgacag gagcttaata
     2941 gtaattataa aaacattaac ctatgtacac tatagcataa tttccttttt taattgcaac
     3001 tttaaaacgt tttagtttt
//
LOCUS       XM_071829587            2767 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839508), transcript variant X6, mRNA.
ACCESSION   XM_071829587
VERSION     XM_071829587.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2767
                     /gene="LOC139839508"
                     /note="uncharacterized LOC139839508; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839508"
     CDS             170..466
                     /gene="LOC139839508"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685688.1"
                     /db_xref="GeneID:139839508"
                     /translation="MESDSSDELFELKGSTVDRKFFELESPATPHNTPEMDCYVCVSD
                     FVDDKTVSSKPKIKGKETITETLLPLGKHAIVKPKESEIHHVLPPKHGKHAVTE"
ORIGIN      
        1 acaccaaaac aaactctcaa aatactgata caaaaacatc accgtaagag gaacaaaaat
       61 gtgcaagcac tcaacagaat tagggttcgc aaaaattgtt atgtaccgaa gcatttaagc
      121 agatgcaatt agggtttgca aaatcaaaat caagtttgta agccagggga tggaatctga
      181 tagttcggat gagttatttg agcttaaagg ctcaactgtc gatcgcaagt tttttgagct
      241 tgaaagccca gctactcctc acaacacccc agagatggat tgctatgtgt gtgtttctga
      301 ttttgttgat gacaaaactg tttctagtaa gcctaaaatc aaggggaaag agacaatcac
      361 tgagactcta ctaccattag gcaaacatgc aattgttaag ccaaaggagt ctgagatcca
      421 ccatgtacta ccaccaaaac atggcaaaca tgctgttact gagtaatatt atttttttat
      481 tttattttta attttgtcat gattttttta atgtaatttg tgatcttttt ttcaatgaac
      541 taatcagtgg ggagctttcg tttagggttt ataataagga agggacgggc cacgtgtaag
      601 tttgctaata atggtttttt agcaatgaat ttgaagtgag cattatactt ggcgaacggg
      661 tagggttggg tcagtttggg taatgggtaa aaatattaaa tgggtccaat tgggtcaaat
      721 aggtctttta ctatatacat ttataatatt attttagtga tgatgttggg tacctttcaa
      781 agttaatcca tcataatcga atgagacacg tgcagcatgc aaacttgcca tctcaacctg
      841 aaacgcgtgc gactgcaatc aggtatgttt gcttgtgtaa gaataatggt tgttgtttta
      901 aagggtatat aaccatattg atatctttat tattatattt atatattttt attaattaat
      961 taatgtgtgt tatacaggaa actttgtttg ttgatttctt gcaaatgcaa caaacgtaaa
     1021 gtcgatgcgg aagcagagtc ccgtgctgct atcagtgaag tccttgctca ggttaaggca
     1081 gaatctaagg cccaagcaaa atttagggaa gatcttcgag tcgaacacag caggtttctg
     1141 atggagtatc agcgtgagaa gcaatttgta gagaacatgg tgactgattt gcatctaaaa
     1201 acatgacatg atgtgtgagt catgtttaaa gacatggata tctttgaggc tgaagcccgt
     1261 gctaagcttg gacaacagct caatgacaga ttggtagccc aaacaaggga atttcgtgat
     1321 gagaggcgcg ttttaaaaga gttgctgtta aaatcaagtt ataatgctgc tgaagcttca
     1381 ctatcactcc agattatgta agtttttttt gttaaattta ttcagattac tttaatttgc
     1441 acatgacagt ttagccaaaa attgataaac ttttaattgg tttaaatctt ccaatctagt
     1501 tatgtcttta caggaacaat tgaaaccaat tgaaagctta tcaatttttg gctaaactgc
     1561 catgtgtaga ttaaagtaat ctgaataaat ttaacaaaaa aacttacata atctggagta
     1621 atagtgaagc ttcagcagcg ttaaaacttg atcttaacat cagctctttt aaaacgcgcc
     1681 tctcttcaga aaattccctt atttgggcta ccaatctgtc attgagctgt tgtccaagca
     1741 gtgcacgggc atcagcctca aatatttccc tatcatgaaa catgtcttgc acatcattct
     1801 ttgtttttaa atacaaacca gtcatcatat tctatacaga ttgcttctca cgctgatact
     1861 ccatcagaaa actgttgtaa tcgattcgaa gatcttccct aaatttttct tgggccttag
     1921 attttacctt gacctgggca aggacttcac tgataacatc acgggacact gcttcagcat
     1981 tggctttacg tttgttgcat ttgcaagaaa tcaacaaaca aagtttcctg tataacacac
     2041 attaattaat taataaaaat atataaatct aataataaag atatcaatat ggttatatac
     2101 cctttaaaac gacaaacatt attcttacac aagcaaacat acttgattgc agtcacacgc
     2161 gtttcaggtt gagatgacaa gtttgcatgt tgcacgtgtc tcattcgatt ctgatggatt
     2221 aactttgaaa ggtaccccac atcatcactg aaataatata ataaatgtat atagtaaaag
     2281 acccatttga cccaattgga cccatttaat atttttaccc attacccaaa ctgacccaac
     2341 cctacccgtt cgccaagtat aatgctcact tcaaattcat tgctaaaaaa ccattattgg
     2401 caaacttaca cgtggcccgt cccttcctta ttataaaccc taaacgaaag ctccccactg
     2461 atctgttcat tgaaaaaaag atcacaaatt acattaaaaa aaatcatgac aaaataaaat
     2521 aaaaaaataa tattactcag taacagcatg tttgccatgt tttggtggta gtacatggtg
     2581 gagatctgag actcctttgg cttaatgcaa ttaatcatat aaaaacatat ttattcgcta
     2641 ctaatttaaa aattaaaaat tacttttacg catgacagga gcttaatagt aattataaaa
     2701 acattaacct atgtacacta tagcataatt tcctttttta attgcaactt taaaacgttt
     2761 tagtttt
//
LOCUS       XM_071829588            1817 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate--glyoxylate
            aminotransferase 2-like (LOC139839509), mRNA.
ACCESSION   XM_071829588
VERSION     XM_071829588.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1817
                     /gene="LOC139839509"
                     /note="glutamate--glyoxylate aminotransferase 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 39 Proteins"
                     /db_xref="GeneID:139839509"
     CDS             207..1652
                     /gene="LOC139839509"
                     /codon_start=1
                     /product="glutamate--glyoxylate aminotransferase 2-like"
                     /protein_id="XP_071685689.1"
                     /db_xref="GeneID:139839509"
                     /translation="MSRKALDYDQINENVKKAQYAVRGELYLRASELQKEGKKIIFTN
                     VGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLIFPADAIAKAKLYLSYTAGGLGA
                     YSDSRGLPGIRKEVAEFIGRRDGYPSDPELIYLTDGASKGVMQILQTVIRGSGDGILV
                     PVPQYPLYSAAISLFGGSLVPYYLEETANWGLDIDNLRQSVAEARSKGITVRAMVIIN
                     PGNPTGQCLSVENLQQILRFCYQENLVLLGDEVYQQNVYQDERPFVSSRKVLFDMGPP
                     ISKEVQLISFYTVSKGFLGECGQRGGYFEMTNIPAETVDEIYKVASISLSPGVSGQIF
                     MGTMVSPPKPGDISYDQFLRESKGILESLRKRAHMMTDGFNSCKNVVCNFTEGAMYSF
                     PQIKLPPKAIEAAKKAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPA
                     EEDMPAIMESFKKFNDAFMGQYEDYRGYSRM"
     misc_feature    207..1424
                     /gene="LOC139839509"
                     /note="alanine transaminase; Region: PLN02368"
                     /db_xref="CDD:177996"
     polyA_site      1817
                     /gene="LOC139839509"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcacattta tccaaattta tcaatctatc caacttcatt tcagtggttg tcagtcttcc
       61 cttttactat attttgtcac accctcaccc ccttttttat actagacaca catttacaca
      121 gtcccaaaga accctaattt atcactcgta ctgctccaat taaggttaac ggctaattta
      181 taaccgctgg ttttgaacca cgaatcatgt cacgtaaagc gttggactat gatcagatta
      241 atgaaaatgt gaagaaagcc cagtatgctg ttaggggtga actgtatctt cgtgcttcag
      301 agcttcaaaa agaaggcaaa aagattatct tcacaaatgt gggtaatcct catgctcttg
      361 gacaaaagcc tctaacattc cctcgtcagg tagttgctct ttgtcaagct ccatttcttc
      421 tcgatgatcc aaatgttgga cttatatttc cagctgatgc aattgcaaaa gctaaactgt
      481 acctttcgta cactgcaggg ggtctaggcg cgtatagtga ttcccggggt cttcctggaa
      541 tacgaaaaga agttgctgag ttcatcggca gacgtgatgg gtatccgagt gatccagaac
      601 tcatatatct cactgatggt gcgagtaaag gagtaatgca aatcttgcaa accgttatcc
      661 gtggttcagg tgatgggatt ctggttccag tccctcagta tccgttatac tcagctgcca
      721 tatctctgtt tggtggttca cttgtaccgt actaccttga agagacggct aactggggtc
      781 tagatatcga caaccttcgc cagtcagttg cagaagcacg ctctaaagga ataactgtaa
      841 gggcaatggt gattataaac cctggaaacc caactggaca atgccttagt gtcgaaaacc
      901 ttcaacaaat tcttagattc tgttaccaag agaatttggt attgctcgga gatgaagttt
      961 atcagcagaa tgtttaccaa gatgaacgcc cgttcgtaag ctctcgaaag gtgttgtttg
     1021 acatgggccc accaattagc aaggaggtcc agcttatttc tttttacacc gtttcgaaag
     1081 gattcttagg tgaatgcgga caacgtggtg gttactttga gatgacaaat atccctgccg
     1141 agacagttga tgaaatatac aaagttgcat ccatttcact tagtcctggt gtttccgggc
     1201 agattttcat gggaacgatg gtcagtccac cgaaacctgg tgatatctcg tacgaccagt
     1261 ttctaagaga gagcaagggt atacttgagt cactaaggaa gagagcacac atgatgactg
     1321 atggattcaa cagttgcaaa aatgttgttt gtaacttcac agaaggtgcc atgtattcgt
     1381 tccctcaaat aaaattacct ccaaaagcaa ttgaagctgc aaaaaaagct ggaaaagttc
     1441 ctgatgtttt ctattgcctc aagctcttag aagccactgg catttcaact gtccctggtt
     1501 ctgggttcgg ccaaaaagaa ggggtgttcc acttgaggac aactatcttg ccagcagaag
     1561 aggacatgcc cgcaatcatg gagagtttca agaaattcaa cgatgcgttc atggggcaat
     1621 atgaagacta tagagggtac tcgaggatgt aagttgtgat tgtttatcca catactatat
     1681 gcgtgtatag ttcttatacc gatctggcta tcgggtgctt attattatta ttaccgtatt
     1741 cgtgtatact ctattgatgt gtactcactc tagtatcttc attcacatca ttaattaacc
     1801 aagtttcatt atcttta
//
LOCUS       XM_071829589            1438 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            At1g29790 (LOC139839510), transcript variant X1, mRNA.
ACCESSION   XM_071829589
VERSION     XM_071829589.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1438
                     /gene="LOC139839510"
                     /note="probable methyltransferase At1g29790; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839510"
     CDS             50..1318
                     /gene="LOC139839510"
                     /codon_start=1
                     /product="probable methyltransferase At1g29790 isoform X1"
                     /protein_id="XP_071685690.1"
                     /db_xref="GeneID:139839510"
                     /translation="MGSVSLKIGDGTARFKNATVCSSAVHILMLFSVITTNLFALYAF
                     TYSPNHHPHQFHFLTHHHTHKNISLISEQVSLILREIDSSQKKLAQMEKHLLGYESFD
                     LSTPHIPNELKLFLQKHQLPLGKDSRTGITEMVSSVGHCCYKSIDILSQYMNYKPNGA
                     CPDDWSISQKLILKGCEPLPRRRCFGKIVPKIGLQPFPISLWNNVSEKSYSWSGIDCK
                     NLACLNSKKLNRDCAGCLDLRNGNEISRFVKSRGKNDFLIDDVLGLGSGGIRIGFDIG
                     GGSGTFAARMAEKNVTIVTASLNIDAPFNEFIAARGIFPLYLSLDHRFPFYENIFDII
                     HVGNGLDIGGRGEKLEFLMFDIDRVIRAGGLFWLDNFLCSNDEKRKNLTRLIERFGYK
                     KLKWVVGERINGAGNSEVYLSAVLQKPVRV"
     misc_feature    <845..>1147
                     /gene="LOC139839510"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; Region: Methyltransf_29; pfam03141"
                     /db_xref="CDD:335237"
ORIGIN      
        1 ctcaacccat ccaacttctt catcttccca aatctcaaat taaagaaaaa tgggttcagt
       61 ttctttaaaa attggtgatg gaacagcaag attcaaaaac gccaccgttt gttcatccgc
      121 agtacatatt ctcatgttat tttcagtcat aacaacaaat ctatttgctt tatatgcttt
      181 tacttactcc ccaaaccacc atcctcatca gtttcacttt cttacacatc atcatactca
      241 taaaaacatt tctttaatct ctgaacaagt ttctttaatc cttagagaga ttgattcttc
      301 acaaaaaaaa cttgcccaga tggaaaaaca ccttcttggt tatgaaagtt ttgatctttc
      361 cacaccccac atcccaaatg agcttaaatt gtttttacaa aaacaccagc ttccattagg
      421 taaagattca agaactggga tcactgaaat ggtctcatct gtgggccatt gttgttataa
      481 atctatagat atattgtctc aatatatgaa ttataaacca aatggtgctt gccctgatga
      541 ctggagtatt tcacaaaagt tgattttgaa ggggtgtgag cctttaccaa gaagaaggtg
      601 ttttggaaaa atagtcccta aaattggtct tcaacctttt cctatttcac tttggaataa
      661 tgtgagtgaa aagagttata gttggagtgg tattgattgt aagaatttgg cttgtttaaa
      721 tagtaaaaaa ttgaataggg attgtgcagg ttgtctggat ttaaggaatg gtaatgagat
      781 ttcaagattt gttaaatcaa gaggtaaaaa tgatttcttg attgatgatg tgttaggttt
      841 aggaagtggt gggattagaa ttggatttga tattggtggt ggatctggta cttttgctgc
      901 tagaatggct gaaaaaaatg tgactattgt gactgcaagt ttgaacattg atgcaccttt
      961 taatgaattt attgcagcta gaggtatttt tccattatac ctaagtttag atcacaggtt
     1021 cccattttat gaaaatattt ttgacataat tcatgttgga aatgggcttg atatcggtgg
     1081 gcgaggtgag aaactcgagt tcttgatgtt tgatattgat cgggtcattc gggctggtgg
     1141 gttgttttgg ttggacaact ttctttgttc taatgacgaa aaaagaaaaa acttgacccg
     1201 tttgattgaa cgatttggat acaagaaact gaaatgggtt gttggtgaga ggattaatgg
     1261 tgcagggaac tctgaggtat atttgtctgc tgttcttcag aaaccagtaa gagtttgaag
     1321 gctgtttctt ccaattggtc atagggacgg ctgatgtaat gttaactgta acgtatccta
     1381 attctaacgc tgccgttgac ggaataccat cgtcggtggc ggagcaacca cgacggag
//
LOCUS       XR_011756974            1891 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            At1g29790 (LOC139839510), transcript variant X2, misc_RNA.
ACCESSION   XR_011756974
VERSION     XR_011756974.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1891
                     /gene="LOC139839510"
                     /note="probable methyltransferase At1g29790; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839510"
     misc_RNA        1..1891
                     /gene="LOC139839510"
                     /product="probable methyltransferase At1g29790, transcript
                     variant X2"
                     /db_xref="GeneID:139839510"
ORIGIN      
        1 ctcaacccat ccaacttctt catcttccca aatctcaaat taaagaaaaa tgggttcagt
       61 ttctttaaaa attggtgatg gaacagcaag attcaaaaac gccaccgttt gttcatccgc
      121 agtacatatt ctcatgttat tttcagtcat aacaacaaat ctatttgctt tatatgcttt
      181 tacttactcc ccaaaccacc atcctcatca gtttcacttt cttacacatc atcatactca
      241 taaaaacatt tctttaatct ctgaacaagt ttctttaatc cttagagaga ttgattcttc
      301 acaaaaaaaa cttgcccaga tggaaaaaca ccttcttggt tatgaaagtt ttgatctttc
      361 cacaccccac atcccaaatg agcttaaatt gtttttacaa aaacaccagc ttccattagg
      421 taaagattca agaactggga tcactgaaat ggtctcatct gtgggccatt gttgttataa
      481 atctatagat atattgtctc aatatatgaa ttataaacca aatggtgctt gccctgatga
      541 ctggagtatt tcacaaaagt tgattttgaa ggggtgtgag cctttaccaa gaagaaggtg
      601 ttttggaaaa atagtcccta aaattggtct tcaacctttt cctatttcac tttggaataa
      661 tgtgagtgaa aagagttata gttggagtgg tattgattgt aagaatttgg cttgtttaaa
      721 tagtaaaaaa ttgaataggg attgtgcagg ttgtctggat ttaaggaatg gtaatgagat
      781 ttcaagattt gttaaatcaa gaggtaaaaa tgatttcttg attgatgatg tgttaggttt
      841 aggaagtggt gggattagaa ttggatttga tattggtggt ggatctggta cttttgctgc
      901 tagaatggct gaaaaaaatg tgactattgt gactgcaagt ttgaacattg atgcaccttt
      961 taatgaattt attgcagcta gaggtatttt tccattatac ctaagtttag atcacaggtt
     1021 cccattttat gaaaatattt ttgacataat tcatgttgga aatgggcttg atatcggtgg
     1081 gcgaggtgag aaactcgagt tcttgatgtt tgatattgat cgggtcattc gggctggtgg
     1141 gttgttttgg ttggacaact ttctttgttc taatgacgaa aaaagaaaaa acttgacccg
     1201 tttgattgaa cgatttggat acaagaaact gaaatgggtt gttggtgaga ggattaatgg
     1261 tgcagggaac tctgaggtat atttgtctgc tgttcttcag aaaccagtaa gagtttgaag
     1321 gctgtttctt ccaattggat atttgaacaa tgctgctgct gctcctgacc tttaatgcat
     1381 ttctattttt acccctgaag tcttcgcttg agtggtatga ggtgagatcc aacttggggt
     1441 actgccattc cagttcgatt ctcactccaa gcgggagttt ccaacctttg atggtatcgc
     1501 caacatcaat gcaatttggg aaggtctcgg gggtttttcc caaccttcga tggtactgtc
     1561 aacattctcg cgaattggtt tccttctaac gtgtgtatga gtggcatatg gtcgcgaaca
     1621 tgggttgatt ttctgagggg catgaagggg tgttggcccc tccaaaaaga acgctaaagt
     1681 ttcaatttta atggaagaag tttagaagtt aataatggag gtagtaagaa ataaagaaga
     1741 taataagtaa gatctatctt tcctgtctct cttcttgggc tttcgagtac tcggtgaact
     1801 tccgacgagc ttttccagtg acaggcggcg aaaacacttg tgctttttgt tttcagacgt
     1861 tgtctcttgg taagtcctct tgtctcgttc g
//
LOCUS       XM_071829590            1262 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            At1g29790 (LOC139839510), transcript variant X3, mRNA.
ACCESSION   XM_071829590
VERSION     XM_071829590.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1262
                     /gene="LOC139839510"
                     /note="probable methyltransferase At1g29790; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839510"
     CDS             78..1187
                     /gene="LOC139839510"
                     /codon_start=1
                     /product="kinase-interacting family protein-like isoform
                     X2"
                     /protein_id="XP_071685691.1"
                     /db_xref="GeneID:139839510"
                     /translation="MLTVTYPNSNAAVDGIPSSVAEQPRRSKNRFMSKPSWLLLSISD
                     MEDKIQAINGENKPDTFGERADFYYRKRPELLALLQDLYNRYLYLADRYTRTLSKQQK
                     LEQIHEQQEICTVLDDMINANAHQSDDESSPSYQSPHTPQKPNPSELVISELVMKFVE
                     YEIAVDELQNLDMIQEESKKKIELQKSLLDVLESERVVLTNENSRLASESLFMKRKAG
                     ELARCVLLERTEDQRVFVLSRKIDDLQGQIYQLEKRNKEYYDKLMKHQVEVNKIEGKK
                     SNNFSINIKRLMVKNNGGGDVSSSSSISWSGEDETGYSMSSTSNSSTCTSLAQVMKKK
                     KSQSDINGGKKIYGWWDRVKKFDMFMCGPNLDATC"
     misc_feature    186..356
                     /gene="LOC139839510"
                     /note="KIP1-like protein; Region: KIP1; pfam07765"
                     /db_xref="CDD:429647"
     misc_feature    <576..884
                     /gene="LOC139839510"
                     /note="Up-regulated During Septation; Region: Uds1;
                     pfam15456"
                     /db_xref="CDD:434730"
ORIGIN      
        1 caccacaacc accttcactt catttcctcc cttctacttc ttcttctact cacaaggtca
       61 tagggacggc tgatgtaatg ttaactgtaa cgtatcctaa ttctaacgct gccgttgacg
      121 gaataccatc gtcggtggcg gagcaaccac gacggagtaa aaataggttt atgagtaaac
      181 cttcatggct tttgctctcg atatctgaca tggaggacaa aatacaagcc attaacggag
      241 aaaataagcc agacacattt ggtgaacgtg cagattttta ctatcgtaaa cgccctgaac
      301 ttctagcctt actccaagac ctttacaatc gttaccttta tcttgctgat cgttacactc
      361 gaacactctc caaacaacaa aaactagaac agatacatga acaacaagaa atatgcacag
      421 ttttagatga catgattaac gcaaacgctc atcagtctga tgatgaaagc tcaccttctt
      481 accaatctcc tcatactcct caaaaaccca atccttccga gttagtaata tccgaactcg
      541 ttatgaagtt tgtagagtac gagatcgcag ttgatgaact ccaaaatttg gatatgattc
      601 aggaagagtc aaagaagaag attgagttac aaaaaagttt actagatgtg ttggaatccg
      661 agcgtgtggt gctaacaaat gaaaattcta gactagcatc tgaatctttg ttcatgaagc
      721 gtaaggcggg cgagcttgca agatgcgtgt tactggaaag aactgaagat caacgcgtgt
      781 ttgtcctaag tcgtaaaatc gatgatcttc aaggtcagat atatcagtta gagaaaagaa
      841 acaaagagta ctatgacaag ttaatgaaac atcaagtgga agtgaacaaa attgaaggca
      901 aaaagagcaa caactttagt ataaacataa agagattgat ggtgaaaaac aatggtggtg
      961 gtgatgttag cagtagtagt agtattagtt ggagtggtga agatgaaaca ggatattcaa
     1021 tgagtagtac aagtaatagc agcacatgta caagtttagc tcaggttatg aagaaaaaga
     1081 aaagtcaaag tgacattaat ggagggaaga agatttatgg ttggtgggac agagtgaaga
     1141 agtttgatat gttcatgtgt ggaccaaatc ttgatgctac ttgctgatat gattaggtaa
     1201 cgttgtaata gtaaattagt aattagtaat agtaattacc atgacaaacg gttctctctt
     1261 tt
//
LOCUS       XM_071829591            1292 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            At1g29790 (LOC139839510), transcript variant X4, mRNA.
ACCESSION   XM_071829591
VERSION     XM_071829591.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1292
                     /gene="LOC139839510"
                     /note="probable methyltransferase At1g29790; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839510"
     CDS             108..1217
                     /gene="LOC139839510"
                     /codon_start=1
                     /product="kinase-interacting family protein-like isoform
                     X2"
                     /protein_id="XP_071685692.1"
                     /db_xref="GeneID:139839510"
                     /translation="MLTVTYPNSNAAVDGIPSSVAEQPRRSKNRFMSKPSWLLLSISD
                     MEDKIQAINGENKPDTFGERADFYYRKRPELLALLQDLYNRYLYLADRYTRTLSKQQK
                     LEQIHEQQEICTVLDDMINANAHQSDDESSPSYQSPHTPQKPNPSELVISELVMKFVE
                     YEIAVDELQNLDMIQEESKKKIELQKSLLDVLESERVVLTNENSRLASESLFMKRKAG
                     ELARCVLLERTEDQRVFVLSRKIDDLQGQIYQLEKRNKEYYDKLMKHQVEVNKIEGKK
                     SNNFSINIKRLMVKNNGGGDVSSSSSISWSGEDETGYSMSSTSNSSTCTSLAQVMKKK
                     KSQSDINGGKKIYGWWDRVKKFDMFMCGPNLDATC"
     misc_feature    216..386
                     /gene="LOC139839510"
                     /note="KIP1-like protein; Region: KIP1; pfam07765"
                     /db_xref="CDD:429647"
     misc_feature    <606..914
                     /gene="LOC139839510"
                     /note="Up-regulated During Septation; Region: Uds1;
                     pfam15456"
                     /db_xref="CDD:434730"
ORIGIN      
        1 gattaatggt gcagggaact ctgaggtata tttgtctgct gttcttcaga aaccagtaag
       61 agtttgaagg ctgtttcttc caattggtca tagggacggc tgatgtaatg ttaactgtaa
      121 cgtatcctaa ttctaacgct gccgttgacg gaataccatc gtcggtggcg gagcaaccac
      181 gacggagtaa aaataggttt atgagtaaac cttcatggct tttgctctcg atatctgaca
      241 tggaggacaa aatacaagcc attaacggag aaaataagcc agacacattt ggtgaacgtg
      301 cagattttta ctatcgtaaa cgccctgaac ttctagcctt actccaagac ctttacaatc
      361 gttaccttta tcttgctgat cgttacactc gaacactctc caaacaacaa aaactagaac
      421 agatacatga acaacaagaa atatgcacag ttttagatga catgattaac gcaaacgctc
      481 atcagtctga tgatgaaagc tcaccttctt accaatctcc tcatactcct caaaaaccca
      541 atccttccga gttagtaata tccgaactcg ttatgaagtt tgtagagtac gagatcgcag
      601 ttgatgaact ccaaaatttg gatatgattc aggaagagtc aaagaagaag attgagttac
      661 aaaaaagttt actagatgtg ttggaatccg agcgtgtggt gctaacaaat gaaaattcta
      721 gactagcatc tgaatctttg ttcatgaagc gtaaggcggg cgagcttgca agatgcgtgt
      781 tactggaaag aactgaagat caacgcgtgt ttgtcctaag tcgtaaaatc gatgatcttc
      841 aaggtcagat atatcagtta gagaaaagaa acaaagagta ctatgacaag ttaatgaaac
      901 atcaagtgga agtgaacaaa attgaaggca aaaagagcaa caactttagt ataaacataa
      961 agagattgat ggtgaaaaac aatggtggtg gtgatgttag cagtagtagt agtattagtt
     1021 ggagtggtga agatgaaaca ggatattcaa tgagtagtac aagtaatagc agcacatgta
     1081 caagtttagc tcaggttatg aagaaaaaga aaagtcaaag tgacattaat ggagggaaga
     1141 agatttatgg ttggtgggac agagtgaaga agtttgatat gttcatgtgt ggaccaaatc
     1201 ttgatgctac ttgctgatat gattaggtaa cgttgtaata gtaaattagt aattagtaat
     1261 agtaattacc atgacaaacg gttctctctt tt
//
LOCUS       XM_071829592            3283 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839512), mRNA.
ACCESSION   XM_071829592
VERSION     XM_071829592.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3283
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3283
                     /gene="LOC139839512"
                     /note="uncharacterized LOC139839512; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839512"
     CDS             165..2861
                     /gene="LOC139839512"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685693.1"
                     /db_xref="GeneID:139839512"
                     /translation="MDFRYARPPQPPSSDPNQPPPPQQHQQPVPPPPGPWYSGQFQYH
                     SPSPPPPQWPHQPKPPHSDHHLPPPPPYAAAAPPPPMPYSSNSYSLPPRPHVPPPQPP
                     YPPVNQEWSNTGWGHQAWDYSGSHLPQNKNEDDWAAKARAWAASKAVTDDQHQNSQLG
                     PVNRPGEMNYHDQYQQHSLPPSNYQQYSSFVPPPRQPENHLADPSSYATDAHFSYNGR
                     DKNLQGPAAVYHHQETAPTSLSAHQQEVPSSYSSVAGKEEPRDTNGHFYQPSQMTYSS
                     APQHQVQPSISPNDKSILAEQRYYSFNNSSAESVTDHGNLPLDTGSRYGHDHGPFGQS
                     ATPGMAYPSMPPVYTTGQQADPLVGVPSPVSMHSTPLFGRATGSSFQPTMPSGNTTFP
                     IGTSNAFHPTNAFPGDAYGFPDRPKKASMPNWLKEEIIKKKAVIGTSVPEFSRQETES
                     NEDELDQPFDKEDQVDKKNMESARSPEKEDDDEDYVEAARAAAVNQEIKRILTEVLLK
                     VTDELFDEIATKVLDEDNLNGEVEHKTIASSDIASAAITPKSSAKVLISAKTKGTNSD
                     DASGKSSSGPPGDVLGLGSYASDDDDDDDEKEVQNSSIPSSDSGKPSIAENAILQVDD
                     RDIRGKMLPEEGHSPRPIPNRDTADNSGKQKVKLESSDVSKSKLSGTGGLNTDYLLAD
                     EPQGGSSRNGLDISHKDKKDNKLDEDSKVHDDRLAKRAKREDQNGSKEKIKDRDSEKK
                     VSKGEVEDHNGIKDKIKDRDSGKKVSKGEIKDNKKERDRDRRSTDKEEGQKRETGKND
                     KSERLKHKSAGDSGRHKRLHSPSAGGRGRSSKDSRSDSSSDDSRRKVHSKRRHSSPSP
                     VRSRRQVSRSPPSKRSHHRHSTYSSLETTRERRRSRSRSRRG"
     misc_feature    <1494..1820
                     /gene="LOC139839512"
                     /note="Arginine/serine-rich protein PNISR; Region: PNISR;
                     pfam15996"
                     /db_xref="CDD:464963"
     misc_feature    2304..>2612
                     /gene="LOC139839512"
                     /note="splicing factor, CC1-like family; Region: SF-CC1;
                     TIGR01622"
                     /db_xref="CDD:273721"
ORIGIN      
        1 tctccgacca acgccgttaa cgcgtcacac accggacggt ttccttgtcc gtcgtcgttt
       61 catctccgtt acatacctcc gtcaatcgcc gtcgtaaatt acttctacaa ctatctaatt
      121 atacacaaca taaactcgaa tcaaaagccc taatatactg tcaaatggac tttcgatacg
      181 cgagaccgcc gcaaccgccg tcgtcggatc ctaaccaacc accaccacca cagcagcatc
      241 aacaaccagt tccgcctcct cctggaccgt ggtactccgg tcaatttcag taccactcgc
      301 cgtcacctcc tccgccacag tggcctcatc agccaaaacc accacactcc gatcaccacc
      361 ttcctcctcc gccaccgtat gctgctgctg ctccgcctcc accgatgccg tactcttcaa
      421 actcgtactc tcttcctcct agaccacatg ttccgccacc acaacctcct tatcctcctg
      481 taaatcagga gtggagtaat acaggctggg gacatcaagc ttgggactat tcaggttcgc
      541 atcttccaca aaacaaaaat gaagatgatt gggcagctaa ggctagagca tgggcggctt
      601 caaaagctgt aacagatgat cagcatcaaa attcacaatt agggcctgtc aatagaccag
      661 gagaaatgaa ctatcatgat caatatcagc aacattcact tcctccatca aactatcaac
      721 agtattcatc ttttgtacct ccaccgaggc aaccagaaaa tcacttggct gatccgtcat
      781 catatgctac agatgcacat ttttcatata atggtagaga taaaaatttg cagggcccag
      841 ctgctgtata tcatcatcaa gaaactgcac ctacaagttt atcagctcac cagcaggagg
      901 taccttctag ttattcttct gttgcaggta aagaagagcc aagagatacg aacggacact
      961 tttatcaacc atcacaaatg acatattctt cagctccaca acatcaagtc caaccatcaa
     1021 tatctcctaa cgataaatca attcttgctg aacaacgtta ttattcgttc aacaactcgt
     1081 cagctgagtc cgtaactgat catggcaacc tgcctttaga tactgggtca aggtatggcc
     1141 atgaccatgg accatttggg caatctgcta cacctggaat ggcttatcct tctatgcctc
     1201 cagtctacac cactggccaa caggctgatc ctttagtcgg tgtaccttct cctgtttcaa
     1261 tgcactcgac acccttattt gggagggcta ctggatcaag cttccaaccc actatgcctt
     1321 ctggaaacac tacctttccc attggaacat caaatgcatt tcatccaaca aatgccttcc
     1381 ctggtgatgc atatgggttt cctgatcgcc ccaaaaaggc ttcaatgcca aactggctca
     1441 aagaggaaat aataaagaaa aaagcagtca ttggaacttc agtccctgag ttttctaggc
     1501 aggagacgga atctaatgaa gatgaattag accaaccttt tgataaagaa gatcaggtag
     1561 ataaaaagaa catggaatca gctcgttcac cagagaaaga ggatgacgat gaggattatg
     1621 ttgaagcagc cagagctgct gcagttaacc aagaaataaa gcgcatttta actgaagttc
     1681 ttttgaaggt tacagatgaa ctttttgatg aaattgcaac aaaagttcta gatgaagaca
     1741 atcttaatgg ggaagttgag cataagacca ttgcttcaag tgatattgca tcagcagcta
     1801 taactcctaa gtcgtctgca aaggttttaa tttcagccaa aaccaaaggc accaattctg
     1861 atgatgctag tgggaaatct agctccggcc cacctggaga tgttctaggg ctgggcagtt
     1921 atgcttcgga tgatgatgat gatgatgatg aaaaagaagt tcaaaattct tcgattccat
     1981 cttccgatag tggtaaacca tctatcgcag aaaatgccat tttacaagtt gacgatcgtg
     2041 atattcgtgg taagatgctt cctgaagaag ggcattcgcc cagaccgatc ccaaataggg
     2101 atacagctga caattccggt aaacaaaaag tcaaacttga aagctctgat gtttcaaagt
     2161 caaagctgag tggaactggg ggtttaaata ctgattatct gttagcagat gagcctcaag
     2221 gtgggagttc tagaaatgga ctggatatta gtcataagga caagaaagat aataagttag
     2281 atgaggacag taaggtccac gatgatagac tcgcaaagag ggcaaaaagg gaagaccaaa
     2341 atggttctaa agagaaaatt aaggatcgag attcagagaa aaaggtcagc aagggtgaag
     2401 ttgaagatca taatggtatt aaagataaaa ttaaggatcg agattcaggg aaaaaggtca
     2461 gcaagggtga aattaaggac aataagaaag agagagacag ggatagaaga tctactgata
     2521 aagaagaggg ccaaaagcgg gaaacgggaa agaatgacaa gagtgaacgg ttgaagcata
     2581 aatctgcagg tgactcgggt aggcacaagc gacttcactc tccatcagct ggaggtaggg
     2641 ggaggagcag caaagactcg agaagtgata gttcatcgga tgactcacga aggaaggtgc
     2701 attctaaaag acgccattca tcaccatcgc ctgtcaggtc aagaagacaa gtgtcaaggt
     2761 ctccacctag caagcgttct catcacaggc attctactta ttcttctctt gaaaccacca
     2821 gggaaaggag gaggtcaaga tcgaggtccc ggagaggata gtgcagctga ttgcaccttt
     2881 gaagattaca ctactatgtt atgcttttct ttgtgtctgt ttccgagggt cgactataat
     2941 cgaccgatct ggtgcctgct atgtagccat cttatataag tcggagacaa cctgttggtt
     3001 caaaaagtgt acaatccaat aataaacagg tgttgtagca tgcgagtttc tgttgaatgg
     3061 ggagtttttc tctgaagtct tgatagtgag gctagttttc gtatcatctt gtatcttgta
     3121 cttgattgga tcaattgtta ttgcaatgaa caacttggga gtgtaattgt aatctagtaa
     3181 tgcaatttct taagttcttt cagtaaatta agttcccaga tcttttcgta tgaagtgagt
     3241 tgtaaaccta taatttgatg tttttaatat tccgaaagtt tgt
//
LOCUS       XM_071829593            1803 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heat shock cognate 70 kDa
            protein-like (LOC139839513), mRNA.
ACCESSION   XM_071829593
VERSION     XM_071829593.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1803
                     /gene="LOC139839513"
                     /note="heat shock cognate 70 kDa protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 42 Proteins"
                     /db_xref="GeneID:139839513"
     CDS             160..1803
                     /gene="LOC139839513"
                     /codon_start=1
                     /product="heat shock cognate 70 kDa protein-like"
                     /protein_id="XP_071685694.1"
                     /db_xref="GeneID:139839513"
                     /translation="MNPTNTIFDAKRLIGRNYSDSKVQDDMKLWPFKVIEGPSDTPKI
                     VVTYKGFDKEFTAEEISSMILGKMKETAEAYLGQVVKDVVITVPAYFNDSQRQATKDA
                     GTIAGLHVIRIINEPTAAAITYGLDNNMSEYDKNVLIFDLGGGTFDVSIVTIKRGGGK
                     FEVIAVSGDTHLGGEDFDNRMLEHCVVEFKRKYRKDLNGNQRAIGRLRSACEKAKRIL
                     SCSVQTSIQVDCLHEGIDFSINFTRAKFEDLNKSMFDSCIKIVEKCLHDAMMEKSQVD
                     EIVLVGGSTRIPKVQSMLEDYFDGKELCKGVNPDEAVAYGAAVMAAKLGGRDDNNTNN
                     YVRDLVLVDVTPLSLGVELYEDLFHAIIPRNTPIPTNKSHICCTLHDNQTTALIKVYQ
                     GERARSIDNHLLGKYTVSGIPPAPRLTSSIEIIFNIDADGILTVTSRILSTGKTEKLI
                     ITNENGRLSKQEIEKMVKDGERYKYEDQEFKKRVDAYNALENCLYYIKNKLGDDDFKK
                     RVHRNSMEKIENAIAVTTMWLLDNPAATAEELLQRKFKA"
     misc_feature    160..1776
                     /gene="LOC139839513"
                     /note="heat shock 70 kDa protein; Provisional; Region:
                     PTZ00009"
                     /db_xref="CDD:240227"
ORIGIN      
        1 ggaattgact tgggaacaac gtactcatgt gttggcgtat ggaagcataa tcgagtcgaa
       61 atcatagcga atgatcaagg caaccgaact acaccttctt ccgttgcttt cactcctaat
      121 gatcgtctca ttggcgaagc tgccaagaat caactaccta tgaatcctac caacaccata
      181 tttgatgcaa agaggttgat tggacggaat tatagtgata gcaaagtgca ggatgacatg
      241 aagttgtggc cttttaaagt catagaaggt ccttccgaca caccaaagat cgttgtcacc
      301 tacaaaggtt ttgataagga attcacggcc gaagaaattt catcaatgat tcttggtaag
      361 atgaaagaaa ccgcagaggc ctaccttgga caagttgtga aagatgtggt tatcaccgtt
      421 ccagcttatt ttaatgattc ccaacgtcaa gctacaaagg atgcaggcac tatcgctggc
      481 ttacacgtta tccgcatcat taatgagccc actgctgctg caatcactta tggtttagac
      541 aacaacatgt ctgaatatga taaaaatgtg ctcatctttg atttgggtgg tggtactttt
      601 gatgtctcta tagtgactat taagagggga gggggtaagt ttgaggtgat agctgtttct
      661 ggtgacactc atttgggagg tgaggatttt gataatcgaa tgttggagca ttgcgttgtt
      721 gaatttaaaa ggaagtatcg taaggactta aatgggaatc aaagagcgat agggaggtta
      781 agatctgctt gtgagaaagc aaaaaggatt ctctcgtgta gtgttcaaac gtcaatccaa
      841 gtggattgct tgcacgaggg gattgatttt tctatcaact ttactcgagc taaatttgaa
      901 gatctgaaca agagcatgtt tgactcttgt atcaagatcg tagaaaaatg tttacacgac
      961 gccatgatgg agaaatcaca agtagatgag attgttctag ttggtggctc gactaggata
     1021 cctaaggttc aaagtatgtt agaagattat tttgatggta aggagctttg caagggtgtg
     1081 aaccctgatg aggctgttgc gtacggtgcc gccgttatgg ctgcaaaatt aggaggacgt
     1141 gatgataata atacaaataa ctatgttcgt gatttggtgc tagtagacgt cactcctttg
     1201 tcacttggtg tagagttata tgaagaccta tttcatgcta tcataccgcg aaacactcca
     1261 ataccaacaa acaaatccca tatatgttgt acgcttcacg ataatcaaac gactgcgctc
     1321 atcaaggtgt atcaaggtga aagagcaaga tctattgata accatctgtt ggggaagtat
     1381 acagtttctg gtattccacc tgctccccga ttgacttcat caattgagat tatctttaac
     1441 atagatgctg acggtatcct gacagtcacg tcaaggatct tatcgactgg taagacggag
     1501 aaacttatca ttaccaatga aaatggaaga ctctccaaac aagaaattga gaagatggtt
     1561 aaagacggtg aaagatacaa atatgaggat caagaattta agaagagagt ggatgcatac
     1621 aatgcattag aaaactgctt atattatatt aaaaataaac tcggcgatga tgatttcaag
     1681 aaaagggtgc accggaacag catggagaaa atcgagaatg ctatcgccgt cacaaccatg
     1741 tggctcttgg ataatccagc agcaactgca gaagagcttc tgcaaaggaa gtttaaggct
     1801 tga
//
LOCUS       XM_071829595            1299 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839514), mRNA.
ACCESSION   XM_071829595
VERSION     XM_071829595.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1299
                     /gene="LOC139839514"
                     /note="uncharacterized LOC139839514; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839514"
     CDS             1..1299
                     /gene="LOC139839514"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685696.1"
                     /db_xref="GeneID:139839514"
                     /translation="MGSRLRGSNSDSEDLRIVQLIQEIEDDDSEVESAPSIPRVRGYI
                     PREREVAAQRLWDDYFCETPKYPQRKFKRRFRMRIQLFLQIVQGITTFQSDNMPEYFT
                     YFSQRFDAIGRPTFTTLQKCMSAIRQLAYGTAPDMWDEYLQMSEQTSILCLDCFCMCI
                     ITLYKKEYMLSPNAHDVARLYNAHEERHGFRGMLGSIDCMHWEWRNYHVALKGQYTRG
                     DHKKPTLMLEAVASYDLWIWHAFFGMAGSNNDINVLNQSPIFEKLKNRTFPSAPFEVN
                     GHEYSKGYYLADGIYPDWATFVKGYSCPTEEPTIKFTRFQASARKDVERAFWILQGRF
                     HIIRIASRSMSVNRMRRVMECCLILHNMILEDNGFALSKWEERFTTEEMENGMERIRN
                     RGRDRDIIAREIRDRDLHNQLTEDLVEHIWNLPPIFRNAN"
     misc_feature    499..1104
                     /gene="LOC139839514"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgggttcga ggttacgggg gtctaattct gactccgaag atttgcggat tgttcaatta
       61 attcaagaaa tagaagatga tgattccgaa gtcgaatcgg caccatctat tccgagagtt
      121 agaggttaca tccctaggga acgggaggtt gctgcacaac gtttgtggga tgattatttt
      181 tgtgagacgc caaaatatcc acaaagaaaa tttaaacgcc gttttcgtat gcgcatacaa
      241 ttatttcttc agatagtgca aggtattact actttccaaa gtgataatat gccagaatat
      301 tttacttact tttctcaacg atttgatgct atcggtaggc ctacatttac tactttacaa
      361 aaatgtatgt cggctatacg tcaattggcg tatggcaccg ctcccgatat gtgggatgaa
      421 tatttgcaaa tgagtgagca aacatcaata ctatgtctag attgcttttg tatgtgtatt
      481 attacattgt acaaaaaaga atacatgcta tctccgaatg cacacgatgt tgctagattg
      541 tataatgctc acgaggagag acatgggttt aggggtatgc tcgggagtat agattgtatg
      601 cactgggagt ggaggaatta tcatgttgct ttaaaaggac aatacactag gggtgatcac
      661 aagaaaccga cccttatgct tgaagctgtt gcttcttatg acttgtggat ttggcatgct
      721 ttttttggga tggcgggttc caacaatgat atcaacgttt tgaaccaatc acctatattt
      781 gaaaaactta agaacagaac atttccatcc gcaccatttg aggtaaatgg gcatgaatat
      841 agcaaaggat attaccttgc ggatggtata tatcctgatt gggcaacttt tgttaaagga
      901 tattcatgtc ctactgaaga accaacgatt aagtttacaa gatttcaagc tagtgcccga
      961 aaggatgtag agagggcatt ttggattctt caaggtcgtt ttcatattat acgcatagct
     1021 tcacgaagta tgagcgttaa caggatgcga agagtgatgg aatgttgtct catattacat
     1081 aacatgatac ttgaagataa cggctttgca ctttctaaat gggaagaaag attcactacc
     1141 gaagaaatgg aaaatggtat ggaacgtata cgaaacagag gacgggatcg agatatcatc
     1201 gcaagagaaa taagggatcg agatttgcac aaccaactca ccgaggattt agtcgagcat
     1261 atttggaacc ttccaccgat ttttcgcaat gcgaattag
//
LOCUS       XM_071829596            1723 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL11 (LOC139839515), mRNA.
ACCESSION   XM_071829596
VERSION     XM_071829596.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1723
                     /gene="LOC139839515"
                     /note="probable serine/threonine-protein kinase PBL11;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 160 Proteins"
                     /db_xref="GeneID:139839515"
     CDS             320..1525
                     /gene="LOC139839515"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL11"
                     /protein_id="XP_071685697.1"
                     /db_xref="GeneID:139839515"
                     /translation="MGICWSIQIKAESAFSNCYDSKTGDRNGNSNSSSKVSNGSQTQT
                     PRSEGEILQSSNLKSFTFNELKNATRNFRPDSVLGEGGFGSVFKGWVDEQSFAASKPG
                     TGIVIAVKRLNQEGFQGHKEWLAEINYLGQLRHPNLVKLIGYCLEDDHRLLAYEFMPK
                     GSMENHLFRRGSYFQPLSWRLRVKVALGAAKGLAFLHNAETMVIYRDFKTSNILLDSN
                     FNAKLSDFGLARDGPTGDKSHVSTRVMGTYGYAAPEYLSTGHLTAKSDVYSFGVVLLE
                     ILSGKKAIDKNRPPGEHNLVEWAKPCLSNKRRIFRVLDPRLEGQYSLGRALKLANLAL
                     QCLCMEPKLRPSMDEVVTTLEELQDNQKRERREPNTNTTSSNKARSCRQEIGQGMVSY
                     PRPSASLRA"
     misc_feature    551..1390
                     /gene="LOC139839515"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(551..565,575..577,641..643,647..649,734..736,
                     782..793,803..805,809..811,938..940,944..946,950..955,
                     959..961,992..994,1001..1003,1055..1066)
                     /gene="LOC139839515"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(551..565,575..577,641..643,647..649,734..736,
                     782..793,803..805,938..940,944..946,950..955,959..961,
                     992..994)
                     /gene="LOC139839515"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(563..565,803..805,809..811,938..940,944..946,
                     950..952,1001..1003,1055..1066)
                     /gene="LOC139839515"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(989..1012,1043..1066)
                     /gene="LOC139839515"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     polyA_site      1723
                     /gene="LOC139839515"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacaaaatgt cactaaagtc tcgaaaaaag ggatttttct ttaaacaaag gaagcatctc
       61 atctgcctcc ataaaccaac caacaatcaa ttccaaattc cccttttttc ttttatttat
      121 ctcccatgaa taattccaat tcaatcaaac aatactataa attaaaagta ctttgtggtt
      181 gctattaaag atctgatttg aatttgcatg aattactgtt gttgttagcc caacaactat
      241 aattagggct ttgttcaaga tatgatttta agctgtaata agtgttgttg gtgatcttgg
      301 gatctataga tttatataaa tgggaatttg ttggagtata cagattaaag ctgagagtgc
      361 cttctctaat tgttatgact caaaaactgg agacagaaat ggaaatagta actcgagtag
      421 caaggtttca aatggttcac aaacacaaac gcctcgtagt gaaggtgaaa tattgcaatc
      481 ttccaactta aagagcttta cattcaacga gcttaaaaac gcaacaagaa actttcgacc
      541 tgatagcgtg ctaggcgaag gtggtttcgg ttctgtattt aaagggtggg ttgatgagca
      601 atcgtttgca gcttcgaaac caggaactgg tatcgttatt gctgtcaaga ggctcaatca
      661 agaaggattt cagggacaca aggagtggct ggcagaaatc aactatcttg ggcagttacg
      721 tcatccgaat cttgtgaaat tgattggtta ttgtttagaa gacgatcata ggctcttggc
      781 ttacgagttt atgccaaagg gtagcatgga gaatcattta ttcaggagag gttcttactt
      841 ccagccatta tcttggcgtc tgcgcgtgaa agttgctctt ggggccgcaa agggtcttgc
      901 gtttcttcat aatgctgaaa caatggtcat ataccgcgac tttaagactt caaatatttt
      961 acttgattcg aacttcaacg caaaattatc cgacttcggt ttggcgaggg atggccccac
     1021 cggagacaaa agccatgtct ctacgagggt tatgggaaca tatggttatg cagctcctga
     1081 atatctttcc acaggtcatt taactgccaa aagtgacgta tacagctttg gagtggttct
     1141 gctagaaatc ttatcaggta aaaaagcaat agacaaaaac cggccacctg gagaacacaa
     1201 cctagtcgaa tgggccaaac cttgtctatc caacaaacga agaatcttcc gggtcctgga
     1261 cccacgactc gagggtcaat attcacttgg ccgagcactc aaattagcaa accttgcact
     1321 tcaatgttta tgcatggaac ccaagttgag accgagtatg gatgaggtcg tgaccacttt
     1381 agaagagctt caagacaatc aaaaacgtga acgtcgggaa ccaaatacaa acacgacgtc
     1441 gagtaataaa gcgaggtcct gtagacaaga aataggccaa gggatggttt cttatcctag
     1501 accttctgct tcccttcgtg cttaattaag cgaattatat ttgttttttt tgttctcaag
     1561 tgcgtccgtt tgggttttac ttggtgtaca gctctttttt tcgtgttgtt ttgcaaagtc
     1621 ggtttgttgt agtttgttcg atgtcaaaga gtatgttgtc aagacatgta cttgaaagct
     1681 tgaatgattt tggtgggtat gataaaattt tatgttctga atg
//
LOCUS       XM_071829597            1914 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polygalacturonase
            At1g48100-like (LOC139839516), mRNA.
ACCESSION   XM_071829597
VERSION     XM_071829597.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1914
                     /gene="LOC139839516"
                     /note="polygalacturonase At1g48100-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839516"
     CDS             27..1550
                     /gene="LOC139839516"
                     /codon_start=1
                     /product="polygalacturonase At1g48100-like"
                     /protein_id="XP_071685698.1"
                     /db_xref="GeneID:139839516"
                     /translation="MGGLTFRKLTFALAVAILLWASSIETCNARRGKHWRHSRGTLSS
                     LYKKKGKNHGHQVIVEKEKSKSKSKPKQKSPPPLPEEPVTPPQMGSKFNVLDYGAKGD
                     GNSDDTEAFQAAWAEACKVEASTMIVPSGYEFLVGPISFSGPYCQRNILFQLDGTIIA
                     PTNANAWGKGLLQWLEFTKLVGLTIRGKGTIDGRGSVWWTKSVVADPIDNEERLIVAL
                     NNITITDNPLVSSSLDGKMPSIKPTAVRFYGSFNVTVTGITIQNSPQCHLKFDSCDGV
                     LAYSLSVTSPGDSPNTDGIHLQNSKNVLIHTSDLACGDDCISIQTGCTNVYVHDVNCG
                     PGHGISIGSLGKDGTTACVSNITVRNVNMHNTMTGVRIKTWQGGSGSVQGVLFSNIQV
                     SEVQFPIMIDQYYCDHSSCTNHTSAVAVSNIAYENIRGTYSVKPVHVSCSDSTPCMDV
                     RLTDIELKPVPKGYHMYDPFCWQAFGELYAPTVPNIDCLQQGTPSSSWDPHETGCPA"
     misc_feature    258..1478
                     /gene="LOC139839516"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 taaacaaaca catacataca ctcacaatgg gtggtttaac tttcaggaaa cttacatttg
       61 cactagccgt tgcaatctta ttgtgggcgt caagcataga aacttgcaat gccagaaggg
      121 gtaagcattg gaggcatagc agaggtacct taagttcttt gtacaagaag aaaggaaaga
      181 atcatgggca ccaagtcatt gttgaaaaag aaaagtcaaa gtcaaaatcg aaaccaaaac
      241 aaaaaagtcc acctccatta ccagaagaac cggtgactcc tccacaaatg ggttcaaaat
      301 ttaatgtgct cgattatgga gctaaaggcg atggtaattc tgatgataca gaggcatttc
      361 aagctgcatg ggcagaggct tgtaaagtag aagcatctac gatgatcgtg ccatccggtt
      421 acgagttcct cgtgggaccc atttctttct ctggtcccta ctgtcaaaga aacattcttt
      481 ttcagcttga tggcacaatc atagctccaa cgaacgcaaa tgcgtggggt aaaggtctcc
      541 tgcaatggct tgaatttaca aaactcgtag gacttacaat caggggcaaa ggcaccattg
      601 atggaagagg ctcggtttgg tggacaaaat ctgtagttgc tgaccctatt gacaacgaag
      661 aaagattaat tgttgcatta aacaatatca caattacaga taatccactg gtcagcagct
      721 cacttgatgg gaaaatgcct agcataaaac caactgcggt gaggttttat gggagcttta
      781 atgtgacggt tacagggata acaattcaaa atagtcccca gtgtcatctc aagtttgaca
      841 gctgtgacgg agttttagcg tacagtttaa gtgtcacgtc tcccggtgac agccccaata
      901 ctgacgggat tcatttgcag aactccaaaa acgtgttaat tcacacctca gaccttgctt
      961 gtggagatga ttgcatatct atacaaacag gatgcacaaa cgtatatgta catgatgtca
     1021 actgtgggcc agggcatgga ataagcatcg gaagcctggg aaaagatggc acaacagcat
     1081 gtgtctccaa catcacggtc cgcaatgtca atatgcataa cacaatgact ggtgttagga
     1141 tcaaaacttg gcagggagga tcagggtcag tacaaggagt attattctca aacattcaag
     1201 tttctgaagt gcaatttcca atcatgattg atcagtatta ttgtgaccac agcagctgca
     1261 caaaccacac atctgctgtg gcggtttcta atatagcata cgaaaatata cgaggaacat
     1321 attcagttaa accagttcat gtctcatgta gcgacagcac gccttgtatg gacgtaaggt
     1381 tgactgacat cgaactcaaa ccagtaccca aaggctacca catgtacgac ccgttctgct
     1441 ggcaagcttt tggagaactg tacgctccca cagtcccaaa tatcgattgt ctacaacagg
     1501 gcacaccatc aagcagctgg gacccacatg agactggatg tccagcataa atgatagatg
     1561 atttggtgca tcaactagtg aggtcggtgt aattgctggc cccttagagt tgcttgaagg
     1621 tgattatatg tatataaata taggtagtat tttcttatac taaaaagttg gttgtattac
     1681 aggattattg atattgattt ttactgtggt gagtcatact ctagaagaag tcgtgtcgtt
     1741 gtagtctgtt tgtttccact atgtatgccg tatggcagta gcatttcatt ggggtctatg
     1801 taaggatatg tgtgcttatt tctctgcaat acaaagttat attcctcaat tgcgttgtat
     1861 atcgttctat tagtcatttt ctaccctatt ggtgacaaca tcacatttca tatg
//
LOCUS       XR_011756975            1067 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839517), ncRNA.
ACCESSION   XR_011756975
VERSION     XR_011756975.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1067
                     /gene="LOC139839517"
                     /note="uncharacterized LOC139839517; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839517"
     ncRNA           1..1067
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839517"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839517"
ORIGIN      
        1 tgactttttc aaccgttggc ttcacaaccc ggattggggg acgccgaggc tgaagctgat
       61 cgggtagcgt cgtaatggtt agtcaactga ttccaacggc gagaccgaca ccaccagttt
      121 ttataccgga tgctttaaag accaaaaccg aaggttatta cgattcatga atctgatggc
      181 gatgagtatt tgctcaaagg gtcagcaact acagattttg tccaccaaac cgagcctctt
      241 ccatcaatgg tgcctttgcc cctgattgta agtcctacga gttttgtaaa ttcaagccat
      301 tgcaggagac ctttacccca cgcatttgcg ttcgttggag ctatgattgt gccatcaagc
      361 tgcgatatta tttgttggag taatgagtgc gttaaatacg ataaaaatta ataaaaaatg
      421 tttaaaaaat attaaccagt ttgacttcct ttcggtttta ggtaatttaa ttatttgagc
      481 taaaaaatga cttggtataa gtagatggtt cgaagtttcc actctagtag cagttaattg
      541 tattctcata tttacctgaa aaagaatgtt tctttgacag tagggaccag agaaagaaat
      601 gggtcccacg aggaactcgt aaccggatgg cacgatcatc gtagatgctt ctactttaca
      661 agcctctgcc catgcagctt gaaatgcctg cattgtgcaa caaggaagta aatatatcat
      721 gcatacaatt attgttggga tcatcaacca tacaaactgc cacatgagag tcttctgagt
      781 ggtcccacct aattttgttc tcttttgtca tccaattcct attatcttta tgctactacg
      841 tatgatttaa ttaatttctt ctaatttttt aatctatgat gattgtatgc attttctaat
      901 aaagaaacca tacaacacct gcaagtcctt ttctacaaac gacacaagtt gctacaaatt
      961 acaatgtaaa aaattcaacc tattgtaaat cttgtgacaa atggatgtcc ttatgcagta
     1021 catgttgatt ttgaaaaaaa atgttaccag ctctgttcca aaaaata
//
LOCUS       XM_071829598            3769 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839518), transcript variant X1, mRNA.
ACCESSION   XM_071829598
VERSION     XM_071829598.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3769
                     /gene="LOC139839518"
                     /note="uncharacterized LOC139839518; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839518"
     CDS             108..3434
                     /gene="LOC139839518"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685699.1"
                     /db_xref="GeneID:139839518"
                     /translation="MFAKLFHRNPQESSPPEDDSQLKDFEPRVIVHYGIPSTASIMAF
                     DHLQHLLAVGTLDGRIKVIGGDNIECLLISPKPVPFKNLEFLQNQGFLVSISNENLVQ
                     VWDLEQRKLASSLQWESNISTFSVVGGTNYMYIGDEYGYLSVLKYDIEEGNIKHMPYQ
                     IPADLIADDAGIPVPDQQAVVGLLAQPCSFGKRVLIAYQNGVIILWDVSQDKTIIVKY
                     HKDLYLKDEIIIRSNSDIRRESSNDKSDEEQADKEISALCWVSSDGSILAVGYVDGDI
                     ILWNIPTENSNNDPKVNKMTNNAIKLRLSSGDNRLPVIVLRWSNSSHSGSGQLFVYGG
                     DDIGSEEVLTILNLDLSSGLEALKCVKRLDLTLNGSYADIELVPSIGAADSCYTTLFV
                     LTNPGQLHMYDDDCFSGLVSAPDVKHAVQCPVTVPTIEPYMTIAKFGLVDKDEGLQKI
                     LKETVLAAKPPLASPTTSGSAKWPVSGGFSSQLSPDENIGVERIYIAGYQDGYVRIWD
                     ATFPVFSLIFTLGIQLNICPQVDGTEVPGASEPISALDFHSKTTSLAIGNDRGLVHLL
                     KLVGETEKHIVHFVTETKHEELELHHGNGWQSIAIFSLINSPVRTLQYTFSGARIVVG
                     HECGKVAILDVRSSSVLFITDCLPSSSSSVVSMAMKRYLQTETDDPERSGSTSPSDPE
                     KEVGFILTKDGHVILVDSNSGYKICSQSVNPNESASISVYMLDENISVPDLSEQNTEV
                     KETLESITEPESDSTEAEVNTSSEVVELWKNFVDSLILVCCEDSLLLYSTKSLIQGRL
                     NVRRIIDLEKPCLWTTIFKKNEMEFGVILVYSTGEVEIRSLPDLKVLAETSIMSILRW
                     NFKTNMENTMSSFGNGHITMVYGCEFAVISIFNSENDFRIPEALPRLHDKDVAEAAEA
                     ALKFSLSQKSKQSAPTGIIGGIIKGIKREKENENAHIGETRDILVPKLEALFSRSPFS
                     VSDLDLGDIGDDFDVPVKLVVEKIEVEPMSPEQPSQSQSQTEKNETTQREKLFEGGSV
                     NPEPKARTADEIKAKYRKSGIGDTAAVAQEAKDKLLERQMKLEKLKENSEELASGSEN
                     FASMAGQLAKQMENRKWWQL"
     misc_feature    222..326
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    348..455
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    474..587
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    627..848
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <669..>956
                     /gene="LOC139839518"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    867..944
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1044..1196
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1554..1718
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1731..1874
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1896..2042
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    3234..3410
                     /gene="LOC139839518"
                     /note="SNARE domain of STXBP5, STXBP6 and related
                     proteins; Region: R-SNARE_STXBP5_6; cd15873"
                     /db_xref="CDD:277226"
     misc_feature    order(3237..3239,3246..3251,3255..3257,3267..3272,
                     3276..3284,3288..3293,3297..3302,3309..3314,3318..3335,
                     3339..3356,3360..3377,3381..3389,3393..3398,3405..3407)
                     /gene="LOC139839518"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277226"
     misc_feature    3309..3311
                     /gene="LOC139839518"
                     /note="zero layer; other site"
                     /db_xref="CDD:277226"
ORIGIN      
        1 aaacacatcc gtcatttgga acatgcacac acgcaattcg ccattaaatc caagaattat
       61 gaagccatag gaacgaagaa gctgttcaac tttcgaatta ttccgtaatg tttgccaaat
      121 tatttcacag aaatcctcaa gaatcatctc cacctgagga tgattcacaa ttaaaagact
      181 ttgaaccacg cgtcattgtt cattatggta tcccatctac tgcatcaatc atggcctttg
      241 atcacctgca gcatctactg gctgtaggca cactggatgg aaggataaag gtgattggcg
      301 gcgataacat tgagtgcctt ctaatatctc caaagcccgt accctttaaa aacctagagt
      361 tcttacaaaa ccaagggttt cttgttagca tctcaaacga aaatctagtg caggtttggg
      421 atctagaaca gaggaaatta gcttccagtt tacagtggga atctaatata agcaccttct
      481 ctgtagttgg tggcactaat tacatgtata ttggggacga gtatgggtat ctatccgtgt
      541 taaagtatga catagaagaa ggcaatatca aacacatgcc ctatcagatt cctgcagacc
      601 tcatagctga tgatgctggg attccagtac ctgatcagca ggctgttgtg ggcctccttg
      661 cccaaccttg ttccttcgga aaaagagtgt tgattgccta tcaaaatgga gtaataattt
      721 tatgggacgt ttctcaagat aagactataa ttgttaaata ccataaagat ctgtatttaa
      781 aggatgaaat aataattcgt tccaacagtg atattagacg tgagagttca aatgataaat
      841 cagatgaaga acaggcagat aaggagataa gtgctctctg ttgggtttct tctgatgggt
      901 caatacttgc tgttggttat gtagatggag atattatatt atggaatata ccaactgaaa
      961 actctaacaa tgatccaaaa gtgaataaga tgactaataa tgctattaag ttaagattat
     1021 cttcaggtga caatcgactt ccagtcatag ttcttcgttg gtcaaacagt tcacatagtg
     1081 gttctggtca actttttgtc tatggaggtg atgatatagg ctctgaagaa gttctaacga
     1141 tcttaaatct tgatctttca tcgggtctgg aagctttgaa gtgtgttaag cgcttagacc
     1201 ttacacttaa tggttcatat gcggatatag aactggtacc gagtattggg gcagcagata
     1261 gctgttatac tactcttttt gtgttgacca atccaggaca attacatatg tatgatgatg
     1321 attgtttttc cggattagta tctgctccag acgtaaaaca tgctgttcaa tgcccagtaa
     1381 ctgtaccaac gattgaacct tatatgacca tcgcgaagtt cggtttggta gacaaagacg
     1441 agggtttgca gaaaatactc aaggagacag ttttggctgc aaaacctcca ttagcatctc
     1501 ctacaacttc agggagtgct aagtggcctg tgagtggtgg attttccagt caattatcgc
     1561 ctgatgaaaa tattggggtt gagagaatat acattgcagg gtatcaagat ggatatgttc
     1621 gaatatggga tgccacattt ccagttttct cgttaatatt cactttagga atccagctta
     1681 acatatgtcc ccaggtggat ggtactgaag ttcccggtgc aagtgaacca atatcagcct
     1741 tggattttca ctcgaaaacg acaagcttag ctatcggcaa tgatcgtggt ctggttcatt
     1801 tacttaagct agttggtgaa actgaaaagc atattgtgca ctttgtgaca gaaaccaaac
     1861 acgaagaact tgagttgcac catgggaatg gatggcaatc aatagctatc ttttctctta
     1921 taaattctcc cgtacgaacc ctacaataca cattttctgg agctagaatt gttgtcgggc
     1981 atgaatgcgg taaggttgct atactcgatg ttcgatcatc atcggtactg tttattactg
     2041 attgtttacc cagctctagt tcctcggtgg tttctatggc catgaaaaga tacttacaaa
     2101 ctgaaactga tgatccggaa cgttctggat ccacatcacc aagtgatcca gaaaaggaag
     2161 tgggttttat attaaccaaa gacggacatg tcatccttgt agatagtaat agtggttata
     2221 agatctgttc tcagtcagta aacccgaacg agtcagcttc aatatcagta tacatgttag
     2281 atgaaaatat ttctgttcca gatttatctg aacagaatac tgaagtgaaa gagactttag
     2341 aatcaattac tgagccagaa agtgattcaa ccgaagcgga agttaatacc tcgagtgaag
     2401 tcgttgaatt gtggaagaat tttgtagact ccctcatttt agtttgttgt gaagattcat
     2461 tgcttttata ctcaaccaag tctctaattc aggggcggtt aaacgtcaga agaataattg
     2521 atttagagaa accatgttta tggacaacaa tcttcaagaa aaatgaaatg gagttcggag
     2581 tgattttagt atattcgaca ggagaagttg aaatcaggtc actgcccgat cttaaagtac
     2641 tagcagaaac ttctataatg tccatcctca gatggaactt caagactaat atggaaaaca
     2701 ccatgagttc gtttggtaat gggcacataa caatggtgta cgggtgtgaa tttgctgtta
     2761 tctctatttt caactccgaa aatgacttca ggatcccgga ggctctacct cgccttcatg
     2821 ataaagatgt tgcagaagct gcagaggctg ctcttaaatt ctctctcagc cagaagagta
     2881 aacagagtgc accaacagga ataattggtg ggatcattaa aggtataaag agagaaaaag
     2941 aaaatgagaa cgctcacatt ggagaaactc gagacattct tgttcctaaa ctagaagcct
     3001 tgttttcaag atccccgttt tcagtttcag atttggattt aggagatata ggagatgact
     3061 ttgatgtgcc agtcaaatta gttgtagaga aaatcgaggt cgaacccatg tcccctgaac
     3121 agccatctca gagccagagc cagaccgaga aaaatgagac gacgcagagg gaaaaattat
     3181 ttgaaggtgg ctctgttaat cccgaaccaa aagctagaac cgcagacgaa atcaaggcga
     3241 aatatcgaaa gagcgggatc ggggatactg cggctgtagc tcaagaagcg aaagacaaac
     3301 ttctcgaacg ccaaatgaaa cttgagaaac taaaagaaaa ctctgaagaa ttggcaagtg
     3361 ggtccgaaaa ctttgcatca atggcaggtc agcttgcaaa gcaaatggag aaccgaaagt
     3421 ggtggcagct gtgaataacg tggttcgaac tcggccatca attcaaatca ttgggttggt
     3481 cagtttagtt tccatttttt cttaatcatt ttgtccttat aatttgttta caaaccagat
     3541 aaagcatata ctaccaacac ttgaattatt tgtgtacttg ttcttttagt ttatagaaag
     3601 cttggtccat tcatttcgct tacatgattt tacagtttga cctaaagagg ctagtagccc
     3661 ctcaacttaa gcactctgaa atatgtattg tattaaacat cactggttaa tgcaacaaag
     3721 gcattcaaag tgtaagaact aaaataattt tataattact ttataacct
//
LOCUS       XM_071829599            3749 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839518), transcript variant X2, mRNA.
ACCESSION   XM_071829599
VERSION     XM_071829599.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3749
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3749
                     /gene="LOC139839518"
                     /note="uncharacterized LOC139839518; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839518"
     CDS             107..3415
                     /gene="LOC139839518"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685700.1"
                     /db_xref="GeneID:139839518"
                     /translation="MFAKLFHRNPQESSPPEDDSQLKDFEPRVIVHYGIPSTASIMAF
                     DHLQHLLAVGTLDGRIKVIGGDNIECLLISPKPVPFKNLEFLQNQGFLVSISNENLVQ
                     VWDLEQRKLASSLQWESNISTFSVVGGTNYMYIGDEYGYLSVLKYDIEEGNIKHMPYQ
                     IPADLIADDAGIPVPDQQAVVGLLAQPCSFGKRVLIAYQNGVIILWDVSQDKTIIVKY
                     HKDLYLKDEIIIRSNSDIRRESSNDKSDEEQADKEISALCWVSSDGSILAVGYVDGDI
                     ILWNIPTENSNNDPKVNKMTNNAIKLRLSSGDNRLPVIVLRWSNSSHSGSGQLFVYGG
                     DDIGSEEVLTILNLDLSSGLEALKCVKRLDLTLNGSYADIELVPSIGAADSCYTTLFV
                     LTNPGQLHMYDDDCFSGLVSAPDVKHAVQCPVTVPTIEPYMTIAKFGLVDKDEGLQKI
                     LKETVLAAKPPLASPTTSGSAKWPVSGGFSSQLSPDENIGVERIYIAGYQDGYVRIWD
                     ATFPVFSLIFTLGIQVDGTEVPGASEPISALDFHSKTTSLAIGNDRGLVHLLKLVGET
                     EKHIVHFVTETKHEELELHHGNGWQSIAIFSLINSPVRTLQYTFSGARIVVGHECGKV
                     AILDVRSSSVLFITDCLPSSSSSVVSMAMKRYLQTETDDPERSGSTSPSDPEKEVGFI
                     LTKDGHVILVDSNSGYKICSQSVNPNESASISVYMLDENISVPDLSEQNTEVKETLES
                     ITEPESDSTEAEVNTSSEVVELWKNFVDSLILVCCEDSLLLYSTKSLIQGRLNVRRII
                     DLEKPCLWTTIFKKNEMEFGVILVYSTGEVEIRSLPDLKVLAETSIMSILRWNFKTNM
                     ENTMSSFGNGHITMVYGCEFAVISIFNSENDFRIPEALPRLHDKDVAEAAEAALKFSL
                     SQKSKQSAPTGIIGGIIKGIKREKENENAHIGETRDILVPKLEALFSRSPFSVSDLDL
                     GDIGDDFDVPVKLVVEKIEVEPMSPEQPSQSQSQTEKNETTQREKLFEGGSVNPEPKA
                     RTADEIKAKYRKSGIGDTAAVAQEAKDKLLERQMKLEKLKENSEELASGSENFASMAG
                     QLAKQMENRKWWQL"
     misc_feature    221..325
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    347..454
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    473..586
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    626..847
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <668..>955
                     /gene="LOC139839518"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    866..943
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1043..1195
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1553..1699
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1712..1855
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1877..2023
                     /gene="LOC139839518"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    3215..3391
                     /gene="LOC139839518"
                     /note="SNARE domain of STXBP5, STXBP6 and related
                     proteins; Region: R-SNARE_STXBP5_6; cd15873"
                     /db_xref="CDD:277226"
     misc_feature    order(3218..3220,3227..3232,3236..3238,3248..3253,
                     3257..3265,3269..3274,3278..3283,3290..3295,3299..3316,
                     3320..3337,3341..3358,3362..3370,3374..3379,3386..3388)
                     /gene="LOC139839518"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277226"
     misc_feature    3290..3292
                     /gene="LOC139839518"
                     /note="zero layer; other site"
                     /db_xref="CDD:277226"
ORIGIN      
        1 aacacatccg tcatttggaa catgcacaca cgcaattcgc cattaaatcc aagaattatg
       61 aagccatagg aacgaagaag ctgttcaact ttcgaattat tccgtaatgt ttgccaaatt
      121 atttcacaga aatcctcaag aatcatctcc acctgaggat gattcacaat taaaagactt
      181 tgaaccacgc gtcattgttc attatggtat cccatctact gcatcaatca tggcctttga
      241 tcacctgcag catctactgg ctgtaggcac actggatgga aggataaagg tgattggcgg
      301 cgataacatt gagtgccttc taatatctcc aaagcccgta ccctttaaaa acctagagtt
      361 cttacaaaac caagggtttc ttgttagcat ctcaaacgaa aatctagtgc aggtttggga
      421 tctagaacag aggaaattag cttccagttt acagtgggaa tctaatataa gcaccttctc
      481 tgtagttggt ggcactaatt acatgtatat tggggacgag tatgggtatc tatccgtgtt
      541 aaagtatgac atagaagaag gcaatatcaa acacatgccc tatcagattc ctgcagacct
      601 catagctgat gatgctggga ttccagtacc tgatcagcag gctgttgtgg gcctccttgc
      661 ccaaccttgt tccttcggaa aaagagtgtt gattgcctat caaaatggag taataatttt
      721 atgggacgtt tctcaagata agactataat tgttaaatac cataaagatc tgtatttaaa
      781 ggatgaaata ataattcgtt ccaacagtga tattagacgt gagagttcaa atgataaatc
      841 agatgaagaa caggcagata aggagataag tgctctctgt tgggtttctt ctgatgggtc
      901 aatacttgct gttggttatg tagatggaga tattatatta tggaatatac caactgaaaa
      961 ctctaacaat gatccaaaag tgaataagat gactaataat gctattaagt taagattatc
     1021 ttcaggtgac aatcgacttc cagtcatagt tcttcgttgg tcaaacagtt cacatagtgg
     1081 ttctggtcaa ctttttgtct atggaggtga tgatataggc tctgaagaag ttctaacgat
     1141 cttaaatctt gatctttcat cgggtctgga agctttgaag tgtgttaagc gcttagacct
     1201 tacacttaat ggttcatatg cggatataga actggtaccg agtattgggg cagcagatag
     1261 ctgttatact actctttttg tgttgaccaa tccaggacaa ttacatatgt atgatgatga
     1321 ttgtttttcc ggattagtat ctgctccaga cgtaaaacat gctgttcaat gcccagtaac
     1381 tgtaccaacg attgaacctt atatgaccat cgcgaagttc ggtttggtag acaaagacga
     1441 gggtttgcag aaaatactca aggagacagt tttggctgca aaacctccat tagcatctcc
     1501 tacaacttca gggagtgcta agtggcctgt gagtggtgga ttttccagtc aattatcgcc
     1561 tgatgaaaat attggggttg agagaatata cattgcaggg tatcaagatg gatatgttcg
     1621 aatatgggat gccacatttc cagttttctc gttaatattc actttaggaa tccaggtgga
     1681 tggtactgaa gttcccggtg caagtgaacc aatatcagcc ttggattttc actcgaaaac
     1741 gacaagctta gctatcggca atgatcgtgg tctggttcat ttacttaagc tagttggtga
     1801 aactgaaaag catattgtgc actttgtgac agaaaccaaa cacgaagaac ttgagttgca
     1861 ccatgggaat ggatggcaat caatagctat cttttctctt ataaattctc ccgtacgaac
     1921 cctacaatac acattttctg gagctagaat tgttgtcggg catgaatgcg gtaaggttgc
     1981 tatactcgat gttcgatcat catcggtact gtttattact gattgtttac ccagctctag
     2041 ttcctcggtg gtttctatgg ccatgaaaag atacttacaa actgaaactg atgatccgga
     2101 acgttctgga tccacatcac caagtgatcc agaaaaggaa gtgggtttta tattaaccaa
     2161 agacggacat gtcatccttg tagatagtaa tagtggttat aagatctgtt ctcagtcagt
     2221 aaacccgaac gagtcagctt caatatcagt atacatgtta gatgaaaata tttctgttcc
     2281 agatttatct gaacagaata ctgaagtgaa agagacttta gaatcaatta ctgagccaga
     2341 aagtgattca accgaagcgg aagttaatac ctcgagtgaa gtcgttgaat tgtggaagaa
     2401 ttttgtagac tccctcattt tagtttgttg tgaagattca ttgcttttat actcaaccaa
     2461 gtctctaatt caggggcggt taaacgtcag aagaataatt gatttagaga aaccatgttt
     2521 atggacaaca atcttcaaga aaaatgaaat ggagttcgga gtgattttag tatattcgac
     2581 aggagaagtt gaaatcaggt cactgcccga tcttaaagta ctagcagaaa cttctataat
     2641 gtccatcctc agatggaact tcaagactaa tatggaaaac accatgagtt cgtttggtaa
     2701 tgggcacata acaatggtgt acgggtgtga atttgctgtt atctctattt tcaactccga
     2761 aaatgacttc aggatcccgg aggctctacc tcgccttcat gataaagatg ttgcagaagc
     2821 tgcagaggct gctcttaaat tctctctcag ccagaagagt aaacagagtg caccaacagg
     2881 aataattggt gggatcatta aaggtataaa gagagaaaaa gaaaatgaga acgctcacat
     2941 tggagaaact cgagacattc ttgttcctaa actagaagcc ttgttttcaa gatccccgtt
     3001 ttcagtttca gatttggatt taggagatat aggagatgac tttgatgtgc cagtcaaatt
     3061 agttgtagag aaaatcgagg tcgaacccat gtcccctgaa cagccatctc agagccagag
     3121 ccagaccgag aaaaatgaga cgacgcagag ggaaaaatta tttgaaggtg gctctgttaa
     3181 tcccgaacca aaagctagaa ccgcagacga aatcaaggcg aaatatcgaa agagcgggat
     3241 cggggatact gcggctgtag ctcaagaagc gaaagacaaa cttctcgaac gccaaatgaa
     3301 acttgagaaa ctaaaagaaa actctgaaga attggcaagt gggtccgaaa actttgcatc
     3361 aatggcaggt cagcttgcaa agcaaatgga gaaccgaaag tggtggcagc tgtgaataac
     3421 gtggttcgaa ctcggccatc aattcaaatc attgggttgg tcagtttagt ttccattttt
     3481 tcttaatcat tttgtcctta taatttgttt acaaaccaga taaagcatat actaccaaca
     3541 cttgaattat ttgtgtactt gttcttttag tttatagaaa gcttggtcca ttcatttcgc
     3601 ttacatgatt ttacagtttg acctaaagag gctagtagcc cctcaactta agcactctga
     3661 aatatgtatt gtattaaaca tcactggtta atgcaacaaa ggcattcaaa gtgtaagaac
     3721 taaaataatt ttataattac tttataacc
//
LOCUS       XM_071829600            1486 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides omega-3 fatty acid
            desaturase, chloroplastic-like (LOC139839520), mRNA.
ACCESSION   XM_071829600
VERSION     XM_071829600.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1486
                     /gene="LOC139839520"
                     /note="omega-3 fatty acid desaturase, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 35 Proteins"
                     /db_xref="GeneID:139839520"
     CDS             48..1349
                     /gene="LOC139839520"
                     /codon_start=1
                     /product="omega-3 fatty acid desaturase,
                     chloroplastic-like"
                     /protein_id="XP_071685701.1"
                     /db_xref="GeneID:139839520"
                     /translation="MATRVITECGLRPLPKHYPSPTSRNSISKFPNSINISPSRKIRP
                     NYPALRVSAPAGVQLVNDGDNKRVKGFDDNGENGFNPGAPPPFTLADIRAAIPKHCWV
                     KDPWRSMSYVLRDVVVVFGLAAVAAYFNNMFVWPLYWFAQGTMFWAFFVLGHDCGHGS
                     FSNNAKLNSVVGHFLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRSLD
                     TATRMLRFTLPFPMLAYPFYLWGRSPGKKGSHFHPSSDLFLPKEKTDVITSTVCWSAM
                     AALLVGLSFVMGPLQILKLYGIPYWGFVIWLDLVTYLHHHGHEDKLPWYRGKEWSYLR
                     GGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPILGKYYREPKKS
                     RPLPFHLIGLLANSIKKDHYVSDEGNVVYYQTDPKLASESK"
     misc_feature    48..1346
                     /gene="LOC139839520"
                     /note="The membrane fatty acid desaturase
                     (Membrane_FADS)-like CD includes membrane FADSs, alkane
                     hydroxylases, beta carotene ketolases (CrtW-like),
                     hydroxylases (CrtR-like), and other related proteins. They
                     are present in all groups of organisms with the...;
                     Region: Membrane-FADS-like; cl00615"
                     /db_xref="CDD:445012"
     misc_feature    order(507..509,519..521,615..617,624..629,1116..1118,
                     1125..1130)
                     /gene="LOC139839520"
                     /note="putative di-iron ligands [ion binding]; other site"
                     /db_xref="CDD:239584"
ORIGIN      
        1 tttgaaaaga atattaacag actttcttgt ttcagtttta aacatcaatg gctacaaggg
       61 tcataacaga gtgtggatta agaccacttc caaaacacta tccaagccca acatcaagaa
      121 actcaatatc caaatttcca aattcaataa acatatcacc ttcaagaaaa atcaggccga
      181 attatcctgc actcagagtg agtgcaccgg ccggtgttca gttagtaaat gatggtgata
      241 ataaaagagt gaaagggttt gatgataatg gtgaaaatgg gttcaaccct ggtgcaccac
      301 cacctttcac attggctgat attcgggctg ctataccgaa acattgttgg gttaaggacc
      361 cgtggcggtc catgagttat gttttgagag atgtggtggt ggttttcggg ttggcggctg
      421 tggcggctta ttttaacaat atgtttgttt ggcctttgta ttggtttgct caaggaacaa
      481 tgttttgggc tttctttgtt cttggtcatg attgtggtca tggaagcttt tctaataatg
      541 caaaactcaa tagtgtggtg gggcattttc ttcattcttc tatacttgta ccttatcatg
      601 gatggagaat tagccataga actcatcatc agaaccatgg acatgttgag aatgatgaat
      661 cttggcatcc attatctgag aagatatata gaagtttaga cacggctact cggatgttga
      721 ggttcactct gccttttccc atgcttgcat accctttcta tctgtggggt cgaagtccag
      781 gaaagaaagg gtctcatttt cacccgagca gcgatttgtt tctgcctaag gaaaaaacag
      841 atgtgatcac ctcaacggtt tgttggtcag ccatggctgc cctgcttgtg ggtttgtcct
      901 ttgtcatggg tcctcttcaa atacttaaac tctatggcat accctattgg ggttttgtta
      961 tatggttgga tctagtaact tacttgcatc accatggcca tgaagacaaa cttccatggt
     1021 accgtggcaa ggaatggagt tacctaagag gagggctaac aacacttgat cgtgactacg
     1081 gatggataaa taacatccat catgacatag gaacacatgt tatacatcat ctttttcctc
     1141 aaatcccaca ctatcactta atagaggcaa ctgaagctgc taagccaatt cttgggaaat
     1201 attacaggga gccaaagaaa tcaaggcctc ttccatttca cttaattgga cttcttgcaa
     1261 atagtatcaa aaaagatcat tatgtgagtg atgaaggaaa cgttgtatat tatcaaactg
     1321 acccgaagct cgcgagtgag tcaaaatagt caccctcaat tgataatgtt aatatattgg
     1381 gttatgttgt aacatggata gctaaagttt ttagttttct atataggcac aaagttaggc
     1441 acaaagataa gtacaataat tgttgttcac atatatcttt atcata
//
LOCUS       XR_011756976             678 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839521), ncRNA.
ACCESSION   XR_011756976
VERSION     XR_011756976.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..678
                     /gene="LOC139839521"
                     /note="uncharacterized LOC139839521; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839521"
     ncRNA           1..678
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839521"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839521"
ORIGIN      
        1 ctcgatctcc cctggccaac cactatttct ctgtttagat caataatgta attgtaacgt
       61 ctattcagta atactgatat atacattgat tcattattta ctcttccatc tcattacttt
      121 tgttcataaa atgttcaatc gatgctttgt gtatgatcta aagatccctg ttggcgaatc
      181 aagggaccaa cagctgattt aattggaatg atcatttggc ctaattctaa acgttaggtt
      241 ccggtttcta ctttaaaaga gatttcaaaa gttgcacgtg agttggtgta aagccagatg
      301 gggtatttgt tgatgatgat tccagcacaa atttgaaggc ttctgaagat gccgatcttg
      361 agtttgtgca gcttcatgga gatgggtcac ggtctgcatt ttcaacttta gcaaggaaga
      421 ggcaaattgt ttacgttttg catgcaaatg aggatggtga acttctgaat cacatatatg
      481 atgaatgctg ttctttggct gattgggttc tggtggatag tgcaaaaggg ggcaggttga
      541 aatgggttgt gttgagttga caccctttct atctggtgag tctcatctat caatctatta
      601 ttaagctggg tgatattagc caactgtatg ataaaatgac attgcacttt tgatcatctg
      661 tctacttcct aatcatag
//
LOCUS       XM_071829601            6114 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides methyl-CpG-binding
            domain-containing protein 9 (LOC139839522), transcript variant X1,
            mRNA.
ACCESSION   XM_071829601
VERSION     XM_071829601.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6114
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6114
                     /gene="LOC139839522"
                     /note="methyl-CpG-binding domain-containing protein 9;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139839522"
     CDS             130..5790
                     /gene="LOC139839522"
                     /codon_start=1
                     /product="methyl-CpG-binding domain-containing protein 9
                     isoform X1"
                     /protein_id="XP_071685702.1"
                     /db_xref="GeneID:139839522"
                     /translation="MEHSGSANSSIAGTSGRSVTFEIDLNEAPLPSPREFISGGGGFH
                     RCGTCGEVEGAMVVCGDCGRRFHVECLGVREEQRVWKCFDCLIECRSSKRVRRAAADA
                     GSSGGGGGGSGLFDMNASPPREADGVDEGFFVNSELVLAATFPKLQDLRRNPFFGYTL
                     SSPMAHPDSRFVASGFSSQSMTRFAHINVETATQKGNSLYLQALKDYISEKQGVLGDG
                     WRVKFEFSESNFKTSAIYFAPDGTRFDSMSEVAHYLGLSAYNSIEADDRGSSVIILQK
                     GSHSTKRTKDKKANNLREHKNTLRNGRNAVEVDSMSNGLKSSLEGFPVQFEDFYVISV
                     GKIDPRVSFHNTCQIWPVGYRSIWHDKFTGSIFVYNVLDGGDSGPIFRVHRYPCTNHP
                     IPYASKVLCVTNFAPNHRANETFHNDDDDDSKIHMMFTDRTPPPLLEDDSSCSWMIES
                     CLTAESDIKLQKANDVIGEFTVEERSSTAAWQKAVETLLGSCREAFNNKKVTTFCCNH
                     RVNEHGASYDFDSLGKFSFFTGPVNSIPNKIATSDELDTTCEALRNWLELDRFGLDSE
                     FVQELIEQLPGVTTCSNYNSLSLRSSSQTVGSGFLTAVSKDGLQNEAVSNSLRIASKR
                     PNPPGNIVTSSLPPHLIGDIIQAYEFCLRFHEVLGLEASVSRQSLENELTNPWVDDLK
                     SSKIPFPNEFEKGIILNPDDVVEDLVKASEDHEGDGSWAESASKCAGVKLGKLHMVLL
                     KVVIEDLLAKVMETFDPFGGVESKSRKGRKKDMEGAVGCKKINLDMFPVNEFTWPEVA
                     RRYILVALCMDGNLESSEVMSRECSKVFQCLSGDGGTLCGSFTGVSAMEADAMVLAEA
                     SKKIFTCVNSKAVDFIIDQKEIDAGDSAKDVNVTDDDSPEWAKALEPVRKLPTNVGAR
                     IRKCIHEALTKDPPEWAKSMLQHSISKEVYKGNASGPTKRAVVSVLEKVKVENPQPKP
                     TEKKEKEKSVVTTVSDAVMKQCRVVLRTVANADEDRVFFNLLAKPFLKPNDFDDEGVL
                     GYPAMVSRPLDFRTIDLRLAAGFYATSHESFIEDVREVWQNLRIAYHDRSDLIELVET
                     LTNKFEELYEEEVLKLVNRITESGNNLDSLSDEDKKELNSLIIEIIESALPTAPWEDG
                     VCKVCGMDRNDDNVLLCDKCDSEYHTYCLDPPLARIPDGNWYCPSCLSSSSQSVSQDE
                     RCGTRALSRLRGKKKFQKEFLRNLLEKLAPLADTMELMEYWELGIEESVYLFSVLQRV
                     FLLKFLCDEALNSGVVRNHLVPDSGDLEKTLRRLQKELKSHNKKEEILASNLAKEVID
                     NKSSEIQNEEIDENRQAGQEQESVSETKDKVSCLQEQISNLESKIGKPVIRREYLGQD
                     LVGRLYWVLSGPDRVVVSGPHNRRKPCVTSSSFLSRFNESGMPDMFSSDDSLWTCYES
                     EGEIQELVGWLRDDDPKEKELKETIKQWQANRLHDANASQAVQVDHAISSAYGTNARA
                     ILEMKFGSSFKQGTVIQKKQGRKGKMVNKGNWYRCDCLELVGSTRYHCCTCHWTFLTN
                     EELENHNDGKCENRQESNLSSKGKKISLVKQQALTEHHDEPDSPFVFEEIRARFCTRG
                     SLKDEIKDIGLIGTNGVPTFVLKSPVQNFDAALLLASDTKKWFSLYDGLTDLNPLEKQ
                     GNETPSKADRLKPKGSIGKSSLKNRAPLRICQSALKPLTGRILEILRCLKIILFDIET
                     ALPNEAFRPSRGGLDRIRAWRAYVKSAQSIYEMVQATIILEDMIKTEYLKKGWWYWSS
                     PSTAAKISNISALALRIYTLDAAIYYEKPPLTSNLDPTEPVTPKTSKSEKKTFEKSNT
                     KESSEKSNSKSNTRSSNSPVTDSKPPETSRPKTRSKKRMLDSDS"
     misc_feature    262..384
                     /gene="LOC139839522"
                     /note="PHD zinc finger; Region: PHD; smart00249"
                     /db_xref="CDD:214584"
     misc_feature    order(295..306,316..318,367..369)
                     /gene="LOC139839522"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276966"
     misc_feature    742..927
                     /gene="LOC139839522"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; Region: MBD;
                     cl00110"
                     /db_xref="CDD:469618"
     misc_feature    <1801..1884
                     /gene="LOC139839522"
                     /note="F/Y rich C-terminus; Region: FYRC; cl02651"
                     /db_xref="CDD:470645"
     misc_feature    3088..3429
                     /gene="LOC139839522"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; Region:
                     Bromodomain; cl02556"
                     /db_xref="CDD:445827"
     misc_feature    order(3199..3201,3214..3216,3223..3225,3343..3345,
                     3355..3357,3373..3375)
                     /gene="LOC139839522"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99922"
     misc_feature    3568..3699
                     /gene="LOC139839522"
                     /note="PHD finger 1 found in Schizosaccharomyces pombe
                     Lid2 complex component Lid2p and similar proteins; Region:
                     PHD1_Lid2p_like; cd15519"
                     /db_xref="CDD:276994"
     misc_feature    order(3568..3570,3604..3618,3628..3630,3688..3690)
                     /gene="LOC139839522"
                     /note="putative histone H3 binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276994"
     misc_feature    3814..3975
                     /gene="LOC139839522"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; Region: WHIM1;
                     pfam15612"
                     /db_xref="CDD:464774"
     polyA_site      6114
                     /gene="LOC139839522"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttggaaaccc caaaaccaaa aaccagggct tgcctttctt caatcccaat agcaaacaaa
       61 ttgtacagat ttcattaaaa ccctcgatct tatccatcca tgttgttttc aaattagggt
      121 ttgttttcaa tggagcattc aggttcagct aattcatcga tagctggaac aagtggtcgt
      181 tcagtaactt ttgaaattga tttaaatgaa gctcctcttc cttctccccg agaattcatc
      241 tccggcggcg gcggttttca ccggtgtggt acctgcggtg aggtggaagg tgcgatggtt
      301 gtttgtggcg attgtggtag acggtttcat gttgagtgtt taggtgttag agaagaacaa
      361 agagtatgga agtgttttga ttgtttgatt gaatgccgca gtagcaaaag agtacgtcga
      421 gctgccgccg acgccggcag cagcggcggc ggcggcggtg gttcagggct ttttgatatg
      481 aatgcatctc cgccgcgtga agctgatggt gttgatgagg gtttttttgt taattccgag
      541 cttgttttgg cagccacctt tcctaaattg caggatttga ggcgtaatcc attttttgga
      601 tatacattaa gctctccaat ggctcatccg gattctagat tcgtagcaag cggattctca
      661 tctcaaagta tgacaagatt tgctcatata aacgttgaaa ccgcaacaca aaaaggcaat
      721 tccctgtatc tgcaggcact taaagactac atatctgaaa aacaaggcgt gctaggagat
      781 ggctggcgcg ttaaatttga attctcagaa agcaatttta aaacttctgc aatttacttc
      841 gctcccgatg gaacaagatt tgattcaatg tctgaagttg ctcattatct tggtttatct
      901 gcgtataatt ctattgaagc tgatgacagg ggtagtagcg taattatact acaaaaggga
      961 tcacattcta caaaacggac gaaggacaaa aaggccaata accttagaga gcataagaat
     1021 acattacgta atggccgaaa tgctgtagaa gttgactcga tgtcaaatgg tttgaaatca
     1081 tctcttgaag gttttccggt tcagtttgaa gacttttatg ttatatcagt tggaaaaatt
     1141 gacccacggg tttcgtttca taacacttgt cagatttggc cagtgggtta tcgatctatc
     1201 tggcatgaca aatttacagg gtccattttc gtctataatg ttttagatgg tggtgattcg
     1261 ggccccattt ttagagtaca taggtatccc tgcaccaatc acccaattcc atatgcttca
     1321 aaagtgcttt gcgtgacaaa ttttgcacct aatcatcggg ctaacgagac gtttcataat
     1381 gatgacgatg acgattcgaa gattcacatg atgtttacag atcgtacacc gccacccctt
     1441 cttgaagatg atagttcatg ttcttggatg attgaaagtt gtttgactgc agaatctgac
     1501 attaagcttc aaaaagctaa tgatgtcatt ggtgaattta cagtcgagga gagatcttca
     1561 actgccgcat ggcaaaaagc agtagaaact ttattaggtt catgtcgtga agcattcaac
     1621 aataaaaaag tcacaacttt ttgttgcaac catcgtgtca atgaacatgg ggcgtcttac
     1681 gattttgatt cattaggaaa gtttagcttt tttacaggtc cggttaacag cataccgaat
     1741 aaaatagcga ccagtgacga gcttgatact acttgtgaag cattgcgaaa ttggttagaa
     1801 cttgacagat ttggtttaga ttcagaattt gtacaagaac tcatagaaca gcttccgggt
     1861 gttacaacat gctcaaatta caattctttg agtctaaggt caagttcgca aactgttgga
     1921 agcgggtttt taacagcagt tagcaaagat ggtttgcaaa atgaagcggt atcgaatagt
     1981 cttaggatag caagtaaaag acctaatcca cctggcaata tagtcacctc aagccttcct
     2041 cctcatttaa ttggtgacat tattcaggca tatgagttct gcttgcggtt tcacgaagtt
     2101 ctgggtttgg aggcttccgt atctagacaa tcgctggaga acgagctgac gaatccatgg
     2161 gttgatgatt taaagtcatc aaaaatacct tttccaaatg aattcgaaaa gggtataatc
     2221 ttgaatccag atgatgttgt tgaagatttg gtaaaagcat cagaagatca cgaaggagat
     2281 ggttcttggg cagaatcggc tagcaaatgt gcaggtgtta agctgggaaa attacacatg
     2341 gtgttactaa aggtggtaat tgaagacctg ttagcaaagg tcatggaaac atttgacccg
     2401 tttggtggtg tggaatcaaa gtcaagaaaa ggtaggaaga aagatatgga aggtgcggtt
     2461 ggttgcaaga agataaatct tgatatgttc cccgtgaacg agtttacgtg gcccgaagta
     2521 gcccggagat acattttagt ggcgttgtgt atggacggta accttgaatc ttctgaggtc
     2581 atgagtcgcg aatgtagtaa agtgttccag tgcttgtctg gtgatggcgg tacactttgt
     2641 ggttcgttta caggagtctc tgcaatggag gctgatgcga tggttttggc agaagcgtcc
     2701 aaaaaaatat ttacatgtgt gaacagtaaa gctgttgatt tcatcatcga tcaaaaagag
     2761 atcgatgccg gagactctgc caaagacgtg aacgtaacgg atgacgattc gcctgagtgg
     2821 gcaaaggctc ttgaacctgt acgaaagcta cctactaatg tcggggccag aattaggaag
     2881 tgcattcacg aagctttgac caaagatccg cccgaatggg ctaagagcat gttgcagcac
     2941 tcaatcagca aagaagtgta taagggtaat gcatcagggc ccacaaagag agctgttgtc
     3001 tcggtccttg agaaagtgaa agttgaaaat cctcaaccga aaccaactga gaagaaagaa
     3061 aaagaaaaaa gtgttgttac aactgtatct gatgctgtta tgaaacagtg tcgtgtagtg
     3121 ttacgaactg ttgctaatgc agatgaagat cgagtttttt tcaatctttt agcaaaaccg
     3181 tttttgaagc cgaatgattt tgatgatgag ggggtacttg gataccctgc aatggtttct
     3241 cgtcctttgg actttagaac gatcgaccta agattggctg caggctttta tgccacgtca
     3301 catgaatctt tcattgagga tgttcgcgag gtatggcaaa atttacgaat agcgtatcat
     3361 gacagatctg atctcattga gttggttgaa acacttacaa acaagtttga agaattgtat
     3421 gaagaagagg tacttaaatt ggtcaacaga attacagaaa gtggcaataa tttagattct
     3481 ttgagtgacg aagacaagaa agagttaaac tctcttatca ttgaaataat cgaaagcgca
     3541 ctccccactg caccatggga agacggggtg tgcaaagtat gtgggatgga tagaaacgat
     3601 gacaacgtat tactatgtga taaatgtgat tctgagtacc atacatactg tttagatcct
     3661 ccacttgcaa gaatacccga tgggaattgg tattgtccat cttgcctttc cagcagcagc
     3721 caatcggtat cacaagatga gcgttgtggg acccgtgcac tgtctcgatt acgcggcaag
     3781 aagaaatttc agaaagagtt tttgagaaat cttttggaaa aattagctcc gttagctgat
     3841 accatggagt taatggagta ttgggagttg ggcattgagg agagtgtgta cctattttct
     3901 gttttgcaga gagttttcct tttgaaattc ttatgtgacg aggctctaaa ttctggggtt
     3961 gttcgaaacc accttgttcc cgactctggt gatttggaaa agacgttgcg taggcttcaa
     4021 aaagagttga aaagtcataa taaaaaggag gaaattttgg cctcaaattt agctaaagaa
     4081 gttatagata ataaatctag tgaaatacaa aatgaagaaa tcgacgaaaa taggcaggct
     4141 ggtcaggaac aagaatctgt ttccgaaacc aaggataaag tttcttgttt acaggaacaa
     4201 atttcaaatt tggaatcgaa aatcggtaaa cctgttattc gaagagagta tctgggtcag
     4261 gatctggttg gaagacttta ctgggttctt agtgggccag acagggtcgt tgtgtctggc
     4321 ccacacaata gaaggaagcc atgtgtaacc tcttccagtt ttctgtctag attcaacgaa
     4381 tctggaatgc cagacatgtt ctcgtctgac gattctttgt ggacttgtta cgaatcggaa
     4441 ggtgaaattc aagagctcgt tgggtggcta agggacgatg atccgaagga aaaagaattg
     4501 aaagaaacca tcaaacagtg gcaagcaaat cgactacacg atgctaacgc atcacaggct
     4561 gttcaagttg atcacgcgat ttcgtctgct tatggaacca atgcaagggc aatattggaa
     4621 atgaaatttg gttcttcgtt taaacaaggg acggttattc agaaaaagca gggtcgcaag
     4681 ggtaaaatgg tcaataaggg gaactggtac aggtgtgatt gtttggagtt agtggggtcc
     4741 actcgatatc attgttgtac atgtcactgg acctttctca ctaacgagga gcttgaaaat
     4801 cataacgatg gaaagtgtga aaatcgtcaa gaatctaacc tttcttcgaa aggcaagaag
     4861 atttcgttag tcaaacagca agcgttgacc gagcatcatg atgaacccga ttcgccgttt
     4921 gtgtttgagg agattagggc aaggttttgc actcgtggtt cactaaaaga cgaaattaaa
     4981 gatatcgggc ttatagggac aaacggtgtt ccaacttttg tattaaaatc acccgtacaa
     5041 aactttgatg ctgctttatt gttagcttcg gataccaaaa aatggttcag tttgtatgac
     5101 gggttgacag atttgaaccc gttggaaaaa caaggcaacg agacaccgtc taaggctgat
     5161 agattgaaac ccaagggtag tattggaaaa tcatcgttga agaatcgagc tccgttgcgt
     5221 atttgtcagt ccgctttgaa gccgttaacg ggtcggatcc tagaaatcct tcggtgtctt
     5281 aagatcatat tgtttgatat agaaacagca cttccgaatg aagcttttag accttcgagg
     5341 ggaggtttgg atcgaatacg tgcttggcgt gcttatgtaa agtcagctca atcgatatat
     5401 gagatggtac aggcaacaat catattagag gatatgataa aaaccgagta cctgaaaaaa
     5461 ggatggtggt attggtcatc accttcaact gctgctaaaa tttccaacat ttcggccctt
     5521 gctctacgaa tatacacgct tgatgcagca atttattatg aaaaaccacc cttaacttcc
     5581 aatcttgacc caacagaacc tgtaacaccc aagacctcta agtcagagaa gaagactttt
     5641 gaaaagtcaa acacaaaaga gtcttcagaa aagtcaaact cgaagagcaa tacaaggtca
     5701 agcaactcac ctgtcaccga ttctaaacct cctgaaactt caagacctaa aacaagatcg
     5761 aaaaagagaa tgctagattc tgacagctaa aaagctagta tttgtaattt ctgttatgga
     5821 aatcgtcaat atggctgatt catggagggc gattatggta taaaactaac ttagagttga
     5881 tggcgaatca tttgtacata ttatgaaatg aatgaggtgt agttttttgt tgtttatatt
     5941 tgtttgtggt ttctttaaaa tgtttagttg attgagaaaa caacgaatat atcgatatgg
     6001 tgcatcttga ttccatattc gaatatggtt atatcggatg ataggatttc ggggtttgtt
     6061 tctagcgatg atatggaagc aacccaatat cttaagtgtt ctgttttttt gaca
//
LOCUS       XM_071829602            6087 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides methyl-CpG-binding
            domain-containing protein 9 (LOC139839522), transcript variant X2,
            mRNA.
ACCESSION   XM_071829602
VERSION     XM_071829602.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6087
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6087
                     /gene="LOC139839522"
                     /note="methyl-CpG-binding domain-containing protein 9;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139839522"
     CDS             130..5763
                     /gene="LOC139839522"
                     /codon_start=1
                     /product="methyl-CpG-binding domain-containing protein 9
                     isoform X2"
                     /protein_id="XP_071685703.1"
                     /db_xref="GeneID:139839522"
                     /translation="MEHSGSANSSIAGTSGRSVTFEIDLNEAPLPSPREFISGGGGFH
                     RCGTCGEVEGAMVVCGDCGRRFHVECLGVREEQRVWKCFDCLIECRSSKRVRRAAADA
                     GSSGGGGGGSGLFDMNASPPREADGVDEGFFVNSELVLAATFPKLQDLRRNPFFGYTL
                     SSPMAHPDSRFVASGFSSQSMTRFAHINVETATQKGNSLYLQALKDYISEKQGVLGDG
                     WRVKFEFSESNFKTSAIYFAPDGTRFDSMSEVAHYLGLSAYNSIEADDRGSSVIILQK
                     GSHSTKRTKDKKANNLREHKNTLRNGRNAVEVDSMSNGLKSSLEGFPVQFEDFYVISV
                     GKIDPRVSFHNTCQIWPVGYRSIWHDKFTGSIFVYNVLDGGDSGPIFRVHRYPCTNHP
                     IPYASKVLCVTNFAPNHRANETFHNDDDDDSKIHMMFTDRTPPPLLEDDSSCSWMIES
                     CLTAESDIKLQKANDVIGEFTVEERSSTAAWQKAVETLLGSCREAFNNKKVTTFCCNH
                     RVNEHGASYDFDSLGKFSFFTGPVNSIPNKIATSDELDTTCEALRNWLELDRFGLDSE
                     FVQELIEQLPGVTTCSNYNSLSLRSSSQTVGSGFLTAVSKDGLQNEAVSNSLRIASKR
                     PNPPGNIVTSSLPPHLIGDIIQAYEFCLRFHEVLGLEASVSRQSLENELTNPWVDDLK
                     SSKIPFPNEFEKGIILNPDDVVEDLVKASEDHEGDGSWAESASKCAGVKLGKLHMVLL
                     KVVIEDLLAKVMETFDPFGGVESKSRKGRKKDMEGAVGCKKINLDMFPVNEFTWPEVA
                     RRYILVALCMDGNLESSEVMSRECSKVFQCLSGDGGTLCGSFTGVSAMEADAMVLAEA
                     SKKIFTCVNSKAVDFIIDQKEIDAGDSAKDVNVTDDDSPEWAKALEPVRKLPTNVGAR
                     IRKCIHEALTKDPPEWAKSMLQHSISKEVYKGNASGPTKRAVVSVLEKVKVENPQPKP
                     TEKKEKEKSVVTTVSDAVMKQCRVVLRTVANADEDRVFFNLLAKPFLKPNDFDDEGVL
                     GYPAMVSRPLDFRTIDLRLAAGFYATSHESFIEDVREVWQNLRIAYHDRSDLIELVET
                     LTNKFEELYEEEVLKLVNRITESGNNLDSLSDEDKKELNSLIIEIIESALPTAPWEDG
                     VCKVCGMDRNDDNVLLCDKCDSEYHTYCLDPPLARIPDGNWYCPSCLSSSSQSVSQDE
                     RCGTRALSRLRGKKKFQKEFLRNLLEKLAPLADTMELMEYWELGIEERVFLLKFLCDE
                     ALNSGVVRNHLVPDSGDLEKTLRRLQKELKSHNKKEEILASNLAKEVIDNKSSEIQNE
                     EIDENRQAGQEQESVSETKDKVSCLQEQISNLESKIGKPVIRREYLGQDLVGRLYWVL
                     SGPDRVVVSGPHNRRKPCVTSSSFLSRFNESGMPDMFSSDDSLWTCYESEGEIQELVG
                     WLRDDDPKEKELKETIKQWQANRLHDANASQAVQVDHAISSAYGTNARAILEMKFGSS
                     FKQGTVIQKKQGRKGKMVNKGNWYRCDCLELVGSTRYHCCTCHWTFLTNEELENHNDG
                     KCENRQESNLSSKGKKISLVKQQALTEHHDEPDSPFVFEEIRARFCTRGSLKDEIKDI
                     GLIGTNGVPTFVLKSPVQNFDAALLLASDTKKWFSLYDGLTDLNPLEKQGNETPSKAD
                     RLKPKGSIGKSSLKNRAPLRICQSALKPLTGRILEILRCLKIILFDIETALPNEAFRP
                     SRGGLDRIRAWRAYVKSAQSIYEMVQATIILEDMIKTEYLKKGWWYWSSPSTAAKISN
                     ISALALRIYTLDAAIYYEKPPLTSNLDPTEPVTPKTSKSEKKTFEKSNTKESSEKSNS
                     KSNTRSSNSPVTDSKPPETSRPKTRSKKRMLDSDS"
     misc_feature    262..384
                     /gene="LOC139839522"
                     /note="PHD zinc finger; Region: PHD; smart00249"
                     /db_xref="CDD:214584"
     misc_feature    order(295..306,316..318,367..369)
                     /gene="LOC139839522"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276966"
     misc_feature    742..927
                     /gene="LOC139839522"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; Region: MBD;
                     cl00110"
                     /db_xref="CDD:469618"
     misc_feature    <1801..1884
                     /gene="LOC139839522"
                     /note="F/Y rich C-terminus; Region: FYRC; cl02651"
                     /db_xref="CDD:470645"
     misc_feature    3088..3429
                     /gene="LOC139839522"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; Region:
                     Bromodomain; cl02556"
                     /db_xref="CDD:445827"
     misc_feature    order(3199..3201,3214..3216,3223..3225,3343..3345,
                     3355..3357,3373..3375)
                     /gene="LOC139839522"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99922"
     misc_feature    3568..3699
                     /gene="LOC139839522"
                     /note="PHD finger 1 found in Schizosaccharomyces pombe
                     Lid2 complex component Lid2p and similar proteins; Region:
                     PHD1_Lid2p_like; cd15519"
                     /db_xref="CDD:276994"
     misc_feature    order(3568..3570,3604..3618,3628..3630,3688..3690)
                     /gene="LOC139839522"
                     /note="putative histone H3 binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276994"
     misc_feature    3814..3948
                     /gene="LOC139839522"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; Region: WHIM1;
                     pfam15612"
                     /db_xref="CDD:464774"
     polyA_site      6087
                     /gene="LOC139839522"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttggaaaccc caaaaccaaa aaccagggct tgcctttctt caatcccaat agcaaacaaa
       61 ttgtacagat ttcattaaaa ccctcgatct tatccatcca tgttgttttc aaattagggt
      121 ttgttttcaa tggagcattc aggttcagct aattcatcga tagctggaac aagtggtcgt
      181 tcagtaactt ttgaaattga tttaaatgaa gctcctcttc cttctccccg agaattcatc
      241 tccggcggcg gcggttttca ccggtgtggt acctgcggtg aggtggaagg tgcgatggtt
      301 gtttgtggcg attgtggtag acggtttcat gttgagtgtt taggtgttag agaagaacaa
      361 agagtatgga agtgttttga ttgtttgatt gaatgccgca gtagcaaaag agtacgtcga
      421 gctgccgccg acgccggcag cagcggcggc ggcggcggtg gttcagggct ttttgatatg
      481 aatgcatctc cgccgcgtga agctgatggt gttgatgagg gtttttttgt taattccgag
      541 cttgttttgg cagccacctt tcctaaattg caggatttga ggcgtaatcc attttttgga
      601 tatacattaa gctctccaat ggctcatccg gattctagat tcgtagcaag cggattctca
      661 tctcaaagta tgacaagatt tgctcatata aacgttgaaa ccgcaacaca aaaaggcaat
      721 tccctgtatc tgcaggcact taaagactac atatctgaaa aacaaggcgt gctaggagat
      781 ggctggcgcg ttaaatttga attctcagaa agcaatttta aaacttctgc aatttacttc
      841 gctcccgatg gaacaagatt tgattcaatg tctgaagttg ctcattatct tggtttatct
      901 gcgtataatt ctattgaagc tgatgacagg ggtagtagcg taattatact acaaaaggga
      961 tcacattcta caaaacggac gaaggacaaa aaggccaata accttagaga gcataagaat
     1021 acattacgta atggccgaaa tgctgtagaa gttgactcga tgtcaaatgg tttgaaatca
     1081 tctcttgaag gttttccggt tcagtttgaa gacttttatg ttatatcagt tggaaaaatt
     1141 gacccacggg tttcgtttca taacacttgt cagatttggc cagtgggtta tcgatctatc
     1201 tggcatgaca aatttacagg gtccattttc gtctataatg ttttagatgg tggtgattcg
     1261 ggccccattt ttagagtaca taggtatccc tgcaccaatc acccaattcc atatgcttca
     1321 aaagtgcttt gcgtgacaaa ttttgcacct aatcatcggg ctaacgagac gtttcataat
     1381 gatgacgatg acgattcgaa gattcacatg atgtttacag atcgtacacc gccacccctt
     1441 cttgaagatg atagttcatg ttcttggatg attgaaagtt gtttgactgc agaatctgac
     1501 attaagcttc aaaaagctaa tgatgtcatt ggtgaattta cagtcgagga gagatcttca
     1561 actgccgcat ggcaaaaagc agtagaaact ttattaggtt catgtcgtga agcattcaac
     1621 aataaaaaag tcacaacttt ttgttgcaac catcgtgtca atgaacatgg ggcgtcttac
     1681 gattttgatt cattaggaaa gtttagcttt tttacaggtc cggttaacag cataccgaat
     1741 aaaatagcga ccagtgacga gcttgatact acttgtgaag cattgcgaaa ttggttagaa
     1801 cttgacagat ttggtttaga ttcagaattt gtacaagaac tcatagaaca gcttccgggt
     1861 gttacaacat gctcaaatta caattctttg agtctaaggt caagttcgca aactgttgga
     1921 agcgggtttt taacagcagt tagcaaagat ggtttgcaaa atgaagcggt atcgaatagt
     1981 cttaggatag caagtaaaag acctaatcca cctggcaata tagtcacctc aagccttcct
     2041 cctcatttaa ttggtgacat tattcaggca tatgagttct gcttgcggtt tcacgaagtt
     2101 ctgggtttgg aggcttccgt atctagacaa tcgctggaga acgagctgac gaatccatgg
     2161 gttgatgatt taaagtcatc aaaaatacct tttccaaatg aattcgaaaa gggtataatc
     2221 ttgaatccag atgatgttgt tgaagatttg gtaaaagcat cagaagatca cgaaggagat
     2281 ggttcttggg cagaatcggc tagcaaatgt gcaggtgtta agctgggaaa attacacatg
     2341 gtgttactaa aggtggtaat tgaagacctg ttagcaaagg tcatggaaac atttgacccg
     2401 tttggtggtg tggaatcaaa gtcaagaaaa ggtaggaaga aagatatgga aggtgcggtt
     2461 ggttgcaaga agataaatct tgatatgttc cccgtgaacg agtttacgtg gcccgaagta
     2521 gcccggagat acattttagt ggcgttgtgt atggacggta accttgaatc ttctgaggtc
     2581 atgagtcgcg aatgtagtaa agtgttccag tgcttgtctg gtgatggcgg tacactttgt
     2641 ggttcgttta caggagtctc tgcaatggag gctgatgcga tggttttggc agaagcgtcc
     2701 aaaaaaatat ttacatgtgt gaacagtaaa gctgttgatt tcatcatcga tcaaaaagag
     2761 atcgatgccg gagactctgc caaagacgtg aacgtaacgg atgacgattc gcctgagtgg
     2821 gcaaaggctc ttgaacctgt acgaaagcta cctactaatg tcggggccag aattaggaag
     2881 tgcattcacg aagctttgac caaagatccg cccgaatggg ctaagagcat gttgcagcac
     2941 tcaatcagca aagaagtgta taagggtaat gcatcagggc ccacaaagag agctgttgtc
     3001 tcggtccttg agaaagtgaa agttgaaaat cctcaaccga aaccaactga gaagaaagaa
     3061 aaagaaaaaa gtgttgttac aactgtatct gatgctgtta tgaaacagtg tcgtgtagtg
     3121 ttacgaactg ttgctaatgc agatgaagat cgagtttttt tcaatctttt agcaaaaccg
     3181 tttttgaagc cgaatgattt tgatgatgag ggggtacttg gataccctgc aatggtttct
     3241 cgtcctttgg actttagaac gatcgaccta agattggctg caggctttta tgccacgtca
     3301 catgaatctt tcattgagga tgttcgcgag gtatggcaaa atttacgaat agcgtatcat
     3361 gacagatctg atctcattga gttggttgaa acacttacaa acaagtttga agaattgtat
     3421 gaagaagagg tacttaaatt ggtcaacaga attacagaaa gtggcaataa tttagattct
     3481 ttgagtgacg aagacaagaa agagttaaac tctcttatca ttgaaataat cgaaagcgca
     3541 ctccccactg caccatggga agacggggtg tgcaaagtat gtgggatgga tagaaacgat
     3601 gacaacgtat tactatgtga taaatgtgat tctgagtacc atacatactg tttagatcct
     3661 ccacttgcaa gaatacccga tgggaattgg tattgtccat cttgcctttc cagcagcagc
     3721 caatcggtat cacaagatga gcgttgtggg acccgtgcac tgtctcgatt acgcggcaag
     3781 aagaaatttc agaaagagtt tttgagaaat cttttggaaa aattagctcc gttagctgat
     3841 accatggagt taatggagta ttgggagttg ggcattgagg agagagtttt ccttttgaaa
     3901 ttcttatgtg acgaggctct aaattctggg gttgttcgaa accaccttgt tcccgactct
     3961 ggtgatttgg aaaagacgtt gcgtaggctt caaaaagagt tgaaaagtca taataaaaag
     4021 gaggaaattt tggcctcaaa tttagctaaa gaagttatag ataataaatc tagtgaaata
     4081 caaaatgaag aaatcgacga aaataggcag gctggtcagg aacaagaatc tgtttccgaa
     4141 accaaggata aagtttcttg tttacaggaa caaatttcaa atttggaatc gaaaatcggt
     4201 aaacctgtta ttcgaagaga gtatctgggt caggatctgg ttggaagact ttactgggtt
     4261 cttagtgggc cagacagggt cgttgtgtct ggcccacaca atagaaggaa gccatgtgta
     4321 acctcttcca gttttctgtc tagattcaac gaatctggaa tgccagacat gttctcgtct
     4381 gacgattctt tgtggacttg ttacgaatcg gaaggtgaaa ttcaagagct cgttgggtgg
     4441 ctaagggacg atgatccgaa ggaaaaagaa ttgaaagaaa ccatcaaaca gtggcaagca
     4501 aatcgactac acgatgctaa cgcatcacag gctgttcaag ttgatcacgc gatttcgtct
     4561 gcttatggaa ccaatgcaag ggcaatattg gaaatgaaat ttggttcttc gtttaaacaa
     4621 gggacggtta ttcagaaaaa gcagggtcgc aagggtaaaa tggtcaataa ggggaactgg
     4681 tacaggtgtg attgtttgga gttagtgggg tccactcgat atcattgttg tacatgtcac
     4741 tggacctttc tcactaacga ggagcttgaa aatcataacg atggaaagtg tgaaaatcgt
     4801 caagaatcta acctttcttc gaaaggcaag aagatttcgt tagtcaaaca gcaagcgttg
     4861 accgagcatc atgatgaacc cgattcgccg tttgtgtttg aggagattag ggcaaggttt
     4921 tgcactcgtg gttcactaaa agacgaaatt aaagatatcg ggcttatagg gacaaacggt
     4981 gttccaactt ttgtattaaa atcacccgta caaaactttg atgctgcttt attgttagct
     5041 tcggatacca aaaaatggtt cagtttgtat gacgggttga cagatttgaa cccgttggaa
     5101 aaacaaggca acgagacacc gtctaaggct gatagattga aacccaaggg tagtattgga
     5161 aaatcatcgt tgaagaatcg agctccgttg cgtatttgtc agtccgcttt gaagccgtta
     5221 acgggtcgga tcctagaaat ccttcggtgt cttaagatca tattgtttga tatagaaaca
     5281 gcacttccga atgaagcttt tagaccttcg aggggaggtt tggatcgaat acgtgcttgg
     5341 cgtgcttatg taaagtcagc tcaatcgata tatgagatgg tacaggcaac aatcatatta
     5401 gaggatatga taaaaaccga gtacctgaaa aaaggatggt ggtattggtc atcaccttca
     5461 actgctgcta aaatttccaa catttcggcc cttgctctac gaatatacac gcttgatgca
     5521 gcaatttatt atgaaaaacc acccttaact tccaatcttg acccaacaga acctgtaaca
     5581 cccaagacct ctaagtcaga gaagaagact tttgaaaagt caaacacaaa agagtcttca
     5641 gaaaagtcaa actcgaagag caatacaagg tcaagcaact cacctgtcac cgattctaaa
     5701 cctcctgaaa cttcaagacc taaaacaaga tcgaaaaaga gaatgctaga ttctgacagc
     5761 taaaaagcta gtatttgtaa tttctgttat ggaaatcgtc aatatggctg attcatggag
     5821 ggcgattatg gtataaaact aacttagagt tgatggcgaa tcatttgtac atattatgaa
     5881 atgaatgagg tgtagttttt tgttgtttat atttgtttgt ggtttcttta aaatgtttag
     5941 ttgattgaga aaacaacgaa tatatcgata tggtgcatct tgattccata ttcgaatatg
     6001 gttatatcgg atgataggat ttcggggttt gtttctagcg atgatatgga agcaacccaa
     6061 tatcttaagt gttctgtttt tttgaca
//
LOCUS       XM_071829604            3007 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8
            (LOC139839523), mRNA.
ACCESSION   XM_071829604
VERSION     XM_071829604.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3007
                     /gene="LOC139839523"
                     /note="probable alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 8; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 41 Proteins"
                     /db_xref="GeneID:139839523"
     CDS             237..2804
                     /gene="LOC139839523"
                     /codon_start=1
                     /product="probable alpha,alpha-trehalose-phosphate
                     synthase [UDP-forming] 8"
                     /protein_id="XP_071685705.1"
                     /db_xref="GeneID:139839523"
                     /translation="MASKSSADILDLVSDKLLDIPQTPRPLPKVMTLPGIINGYDGDL
                     DNTSSGYRERKIIVANMLPLHVQRDPDTLKLTFTFDEDSPYWQLKDGFSPETEVLYVG
                     SLKVEVDTSEQEEVAQKLLEDFNCVPTFLPHDLHKKFYSGFCKQQLWPLFHYMLPICP
                     DHADRFDRVLWQAYVSANKIFADKVMEVADPDDDYIWVHDYHLMILPTFLRKRYNRVK
                     LGFFLHSPFPSSEIYRTLPVRDEILKGLLNCDLIGFHTFDYARHFLSCCSRMMGLDYE
                     SKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLSLSITSSKVKEIAQRFKGKKLIVGV
                     DDMDIFKGISLKLLAFECLLQMHPELQGNVVLIQIVNPARSTGKDVQEVKKETYLIVN
                     RINESFGSPDYQPVVLIDRLVARYEKSAYYAMADCCILNAVRDGMNLVPYKYIVCRQH
                     LPQLDKSVDTENQTPRTSMLVVSEFVGCSPSLSGAIRVNPWDIESVAGALSSALSMKD
                     SEKQLRHDKHYRYVSSHDVAYWARSFMQDLERASKDHYNKRCWGIGFGLGFRVVSLSP
                     SFRKLSPNYIVSAYKKSNRRAIFLDYDGTLVPQSSIVKSPSEELVSILRALCNDPKNT
                     VFIVSGRGRKSLSEWLAPCERLGLAAEHGYFTRWSSTSEWESTISVTDLEWIEIAEPV
                     MRLYTEATDGSNIEIKESGLVWHHQDADPDFGACQAKELLVHLENVLANEPAVVKRGQ
                     HIVEVKPQGVTKGLVAEKILLKMAETGDVPDFVTCIGDDRSDEDMFESIRNTVLSVPA
                     TSTPEIYACTVGQKPSKAKYYLDDTADVIKLLGGLANASDPKPGNAARFQVTFDTIF"
     misc_feature    237..2750
                     /gene="LOC139839523"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming]; Region: PLN02205"
                     /db_xref="CDD:177855"
     polyA_site      3007
                     /gene="LOC139839523"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcatatctt tctctctcta caatacccaa atttctcttt cacattcaca tttatatctc
       61 tctcgctgta tctatctttc cgtctaccgc cggccaacac cctcaccggt caccttcgtt
      121 accgttctca ccaaccgttt cacagtttgt attaatcaag tactctttaa aaggttattc
      181 gtttgttcga tacgtgaagc tggacgatca agtgaaaaaa cacatatata gtaataatgg
      241 catcaaaatc gtctgcagac attttggatt tggtttccga taagctactc gacatccctc
      301 aaactccaag gccccttcca aaagtaatga cattacctgg aattatcaac ggttacgatg
      361 gggatttaga taacacatca tctggttatc gtgaaagaaa aatcatcgtg gcaaacatgt
      421 tacctttaca tgttcagcgg gacccagata ccctaaagtt gaccttcact tttgatgaag
      481 actcgcctta ttggcaactt aaagatggtt tttcgcctga aactgaggtc ctgtatgtag
      541 gttcactcaa ggttgaagta gatactagtg agcaagaaga agttgctcag aaacttctag
      601 aagatttcaa ttgcgttccc acttttcttc cacacgatct tcataaaaag ttttattctg
      661 gtttctgtaa acaacaatta tggccacttt ttcattacat gcttcccatt tgcccagacc
      721 atgcagatcg gtttgaccgt gttctttggc aggcgtatgt atctgcaaat aaaatatttg
      781 cagataaagt aatggaagta gctgacccag atgatgatta catatgggtt cacgattatc
      841 atcttatgat cttacctaca tttttgagaa aacgttataa tcgagtcaag ctagggtttt
      901 ttcttcatag tccttttcct tcttcagaaa tataccgaac tcttcctgta agggacgaga
      961 ttctgaaagg acttttgaat tgtgacctca tcgggtttca tacgtttgac tacgcacgac
     1021 actttttgtc atgttgcagt agaatgatgg gcctggacta tgaatccaaa cgaggacata
     1081 ttgggctcga ttactttggt cgtacagtgt acatcaagat tctacctgta gggatccata
     1141 tgggtcggct tgaatccgtg ttgagtcttt caatcacatc gagtaaagtc aaagaaatag
     1201 ctcaacgttt caaggggaaa aaacttattg ttggggttga tgacatggat atttttaaag
     1261 ggatcagtct taagttatta gcttttgaat gtctgttaca gatgcatccc gagttacaag
     1321 gtaacgtggt tctgatccaa attgtaaacc ctgcaaggag tacaggaaaa gatgtgcaag
     1381 aagtgaaaaa ggagacttat ctaattgtaa accggatcaa cgagtcattc gggtcgcccg
     1441 attatcaacc cgtggttttg attgaccggc ttgttgctcg ttatgaaaag tctgcttatt
     1501 atgcgatggc tgattgttgc atactcaatg cggttaggga tggaatgaac ttggtaccgt
     1561 acaaatacat cgtttgcagg caacatttgc ctcaacttga taaatctgtt gatacagaga
     1621 accaaacacc tcgcacaagc atgttggttg tgtctgagtt cgtgggttgt tcgccgtctt
     1681 taagtggtgc tatacgggtc aacccgtggg atattgaatc tgtagctgga gctttaagtt
     1741 ctgctctaag tatgaaagat tcagaaaagc aattgaggca tgataaacac tatcgatacg
     1801 taagctctca tgacgtggct tattgggcgc gtagctttat gcaagactta gaaagagcat
     1861 cgaaggatca ttataataaa agatgttggg gtattggttt tggcctcgga tttagagtcg
     1921 tttcactttc tccgagtttc agaaaactgt ctcccaacta cattgtctct gcatacaaaa
     1981 agtcaaacag gcgggccata tttctggatt atgacggtac acttgtgcca caatcatcta
     2041 ttgtaaaaag tccaagtgag gaacttgtga gtatcttgag ggcactttgt aatgatccta
     2101 agaacacggt gttcatcgtt agtggacgtg ggcggaaatc tttaagtgag tggcttgctc
     2161 cttgtgaacg gctcggtctt gcagctgaac atggttattt tactaggtgg agttcaactt
     2221 ctgagtggga atctactatc tcagttacgg atcttgagtg gatcgagatt gcagaacccg
     2281 ttatgagact gtacacagag gcaactgacg gatcaaatat cgagatcaaa gaaagtggtt
     2341 tggtctggca ccatcaagat gctgacccgg actttggtgc ttgtcaagca aaggagttat
     2401 tggtgcattt agagaatgtg ctcgctaatg aaccggcggt tgttaaacgt ggtcaacaca
     2461 tagttgaagt caagcctcag ggtgtgacca aaggattagt tgcagagaaa attctattaa
     2521 agatggcgga aacaggagat gtgccggatt ttgtgacgtg tataggggat gatcgatcgg
     2581 atgaagacat gtttgaaagc ataaggaaca ctgttttaag tgtacccgca acttcaaccc
     2641 cagaaatata tgcttgtaca gttgggcaga agcctagcaa agctaaatac tacctggacg
     2701 acactgctga tgtcataaaa ttgttgggag gtcttgcaaa cgcatcagat ccgaaacctg
     2761 gtaatgctgc tcgatttcag gttacgtttg ataccatttt ttgagttata ctactacctt
     2821 cgtgtacagt ttggtgtttg agggaaaaaa aaaaaaaatt aggatttagt taggttaaat
     2881 cgttaacctg gtctgttctg ttctggtctg gtgtgtatac tactactctt gtaacttccc
     2941 ttccttaaga atgtattcgt ttgggttggg ttccatttgt ggtaatgaag gtgaatcttt
     3001 tagccaa
//
LOCUS       XM_071829605            2138 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides coronatine-insensitive
            protein 1-like (LOC139839524), mRNA.
ACCESSION   XM_071829605
VERSION     XM_071829605.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2138
                     /gene="LOC139839524"
                     /note="coronatine-insensitive protein 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139839524"
     CDS             106..1908
                     /gene="LOC139839524"
                     /codon_start=1
                     /product="coronatine-insensitive protein 1-like"
                     /protein_id="XP_071685706.1"
                     /db_xref="GeneID:139839524"
                     /translation="MEQRSYSNHRTNPNAPSDVVFECVIPYINDSRDRQSISLVCRQW
                     HVIDSQTRKHVTIALCYSSTPEQLRRRFPYLESLKLKGKPRAAMYNLIPEDWGGFVTP
                     WVMEIATSFRCLKSLHFRRMIVSDDDLKVISQSRGANLKDIKLDKCSGFSTDGLLYIC
                     RSCRNLKTLFLEESQITEKDGEWLHELALNNSILETLNFYMTDLSQPKYKDLQLIATK
                     CKSLVSIKISDCDYFDLAAFLRVATSLQEFCGSWFQDKAEQYGDVVFPPRFCGLGLNY
                     MATHEVPIVLPVASRLKKLDLLYCFLDTDDHCLLLQQCINLEILEARNVIGDRGMEIL
                     STYCKKLKRLRIERGADELELEYEEGVVSQRGLTAIAQGCLNLEYIAVYVSDITNAAL
                     ECVGLHLKNLVDFRMVLLDREEVIADLPLDNGVRSLVSSCHNLRRFALYLRPGGLTDV
                     GLTYIGQYSQNIKWMLLGYVGESDKGLLGFSKGCPSLQKLEVRGCCFSEHALASAVLQ
                     LRSLRYLWVQGYRGSPGGFDFLTMARPYWKIEIIPSRKVSVGEDKEVDHPAHVLAYYS
                     LAESRTDFPPSVVPLDPTSSQDHMSRFQDLDYPK"
     misc_feature    142..267
                     /gene="LOC139839524"
                     /note="Region: F-box_5; pfam18511"
                     /db_xref="CDD:436553"
     misc_feature    322..462
                     /gene="LOC139839524"
                     /note="Transport inhibitor response 1 protein domain;
                     Region: Transp_inhibit; pfam18791"
                     /db_xref="CDD:465867"
     misc_feature    445..522
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    <475..>801
                     /gene="LOC139839524"
                     /note="Antagonist of mitotic exit network protein 1;
                     Region: AMN1; cd09293"
                     /db_xref="CDD:187754"
     misc_feature    523..600
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    601..684
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    685..768
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    769..933
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    <979..>1329
                     /gene="LOC139839524"
                     /note="Antagonist of mitotic exit network protein 1;
                     Region: AMN1; cd09293"
                     /db_xref="CDD:187754"
     misc_feature    979..1053
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1054..1125
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1126..1233
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1234..1308
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1309..1407
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1408..1488
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1489..1563
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1564..1638
                     /gene="LOC139839524"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 ggtccccaat caaacaccct aaactccttc cacatcttca tctccaaaat ctactcatct
       61 tctatttttc caatttaaat taaattaaat taaatataat taaaaatgga acagcggagc
      121 tacagtaatc accggaccaa cccgaatgca ccatccgacg tcgttttcga atgcgtaatt
      181 ccatacatca acgactcacg tgaccgtcaa tccatctcac tcgtctgccg tcaatggcac
      241 gtgatcgatt cccaaacacg taaacacgtc acaatcgctt tatgttactc ttcgacaccg
      301 gagcagcttc ggcgccggtt cccgtatcta gaatcgctca aactgaaagg aaagccacgt
      361 gctgctatgt ataatttaat acctgaagat tggggagggt ttgtgacacc ctgggttatg
      421 gaaattgcga cgtcgtttcg gtgcttgaaa tcgttgcatt ttagaaggat gattgtgagt
      481 gatgatgatt tgaaagtaat tagtcaaagt cgtggtgcta atttgaagga tattaaactt
      541 gataagtgtt ctggcttttc aactgatgga ttgttgtata tttgtcgctc ttgcaggaat
      601 ttgaaaactt tgtttctaga agaaagccaa ataaccgaaa aggacggaga gtggttacat
      661 gagcttgctt tgaacaacag catccttgaa acgttgaact tttacatgac cgacctttct
      721 caacccaagt ataaagatct tcaacttatt gctacaaaat gcaagtcttt agtttctatt
      781 aaaataagcg attgtgatta ctttgattta gctgcatttc ttcgtgttgc tacttcatta
      841 caagaatttt gtggaagttg gtttcaagat aaagctgaac agtacggtga tgtagtgttt
      901 ccaccaagat tttgtggatt gggtctaaat tacatggcga cccacgaagt tccaattgtg
      961 cttcctgttg catcgcggct caagaaactg gatcttcttt attgctttct ggatacagat
     1021 gatcattgtc tcttgctgca gcagtgtatc aaccttgaaa ttcttgaggc aagaaatgtg
     1081 ataggagatc gtggtatgga aatactctct acctattgca agaagctaaa acgtttaagg
     1141 attgaacgag gggcagatga gttagaattg gaatacgaag aaggcgttgt ttctcaaagg
     1201 ggactaaccg ccatagctca aggctgttta aacctagagt acattgctgt atatgtatcc
     1261 gatatcacaa acgcagccct cgagtgcgtg ggcctacact tgaaaaacct cgtcgacttt
     1321 cgaatggtct tactagaccg agaagaggta atagccgatt tacctcttga taacggtgta
     1381 cgatctttag taagtagttg ccataacctt agaagatttg cactttatct tagacctgga
     1441 gggttgactg atgtgggttt gacttatatt ggtcaatata gtcaaaatat aaaatggatg
     1501 ttgttagggt acgttggtga atcggataag ggtctgttag ggttctctaa agggtgtcct
     1561 agtttgcaaa aacttgaagt aagagggtgt tgttttagtg aacatgcact tgctagtgct
     1621 gttttgcagt tgaggtcact taggtatctt tgggttcaag ggtatagagg gtcaccaggt
     1681 gggtttgact ttttgaccat ggctagacca tactggaaaa ttgaaataat tccttcaaga
     1741 aaagttagcg ttggtgaaga taaagaggtg gaccatccag cacatgttct tgcttattat
     1801 tctcttgctg aatcaagaac tgattttccc ccttctgttg taccattaga tcccacttca
     1861 agtcaagatc atatgagtag atttcaagat ttagactacc ctaaataata taaaagcctt
     1921 gcctttattg ttgttttcag tcatgtaaca tatatttttt ttctttcatt ttttagtttt
     1981 gtatttatgt ggcgtgagaa gaaaatgaaa atgtgatcat gagatttttc attttgacat
     2041 tttcagtttg gcattgtctg ctttttcgga tgattaaatt gttaatagtg tgaacaatgt
     2101 acataataat gtttatatat tgcataataa atgtgttg
//
LOCUS       XM_071829606            2092 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable zinc
            metalloprotease EGY2, chloroplastic (LOC139839525), mRNA.
ACCESSION   XM_071829606
VERSION     XM_071829606.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2092
                     /gene="LOC139839525"
                     /note="probable zinc metalloprotease EGY2, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139839525"
     CDS             140..1828
                     /gene="LOC139839525"
                     /codon_start=1
                     /product="probable zinc metalloprotease EGY2,
                     chloroplastic"
                     /protein_id="XP_071685707.1"
                     /db_xref="GeneID:139839525"
                     /translation="MSLTAIMTTTACFRGNFVPLSHCNSSRDLRFQPFISSYGRTRTN
                     YSVKCISRLVISGNRVVKCRAVESNTAPDDDNNKESEEHEVVEIAESTTNSSAPVSGN
                     DKEKDKSQLSQLESLNKFLDGSKAQELNEDKSKKTQLEMLNKLLNKDVVETKATEVTE
                     EVPNIEIASGSPLPGVKPQQLNDIYMIPKETIDILKDQVFGFDTFFITSQEPYEGGVL
                     FKGNLRGQASVSYKKIEKRLLETFGDQYKLFLLINPEDDKPVAVVVPRKTLQPETTAV
                     PEWFAAGAFGLVTIFTLLLRNVPALQSNLLSVFDNPELLKDGLAGALVTALSLGVHEV
                     SHILVAKNAGVKLGVPYFVPSWQIGSFGGITRILNIVPNREDLLKIAAAGPLAGFSIG
                     LILLLLGFYIPPSDGIGIIVDTAVFHESFLAGGIGKLLLGDALKEGATISLNPLVIWA
                     WAGLLINAINSIPAGELDGGRISLAIWGRKAASRFSAASIVLLGLSSLLDDVAFYWVV
                     LIFFLQRGPIAPLAEEISEPDNKYVALGIIVLVMSLLVCLPYPFPFSSEAVTSL"
     misc_feature    989..1675
                     /gene="LOC139839525"
                     /note="Uncharacterized homologs of Site-2 protease (S2P),
                     zinc metalloproteases (MEROPS family M50) which cleave
                     transmembrane domains of substrate proteins, regulating
                     intramembrane proteolysis (RIP) of diverse signal
                     transduction mechanisms. Members of the...; Region:
                     S2P-M50_like_2; cd06160"
                     /db_xref="CDD:100081"
     misc_feature    order(1133..1138,1145..1147,1517..1519,1541..1543)
                     /gene="LOC139839525"
                     /note="active site"
                     /db_xref="CDD:100081"
     misc_feature    1517..1528
                     /gene="LOC139839525"
                     /note="putative substrate binding region [chemical
                     binding]; other site"
                     /db_xref="CDD:100081"
     polyA_site      2092
                     /gene="LOC139839525"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagattttg aaatatctcg ttcctttccc tctccacctt taacaatcca tacacccaaa
       61 aaaccctcaa ctgtatcaat tcaattccca taaaacccta atctatcaaa ccattaatct
      121 caatgtctga tgctttaaca tgagcttaac agcaattatg accacaacgg cttgttttcg
      181 cggcaacttc gttccgttat cacattgtaa ttcaagtcgt gaccttcgat ttcagccgtt
      241 catttcatcg tacggtcgca cacggactaa ttattccgtg aaatgcattt ccaggttagt
      301 gattagtgga aaccgagtgg ttaaatgccg agcggttgag tcgaacactg caccggatga
      361 tgataacaat aaagaaagtg aagagcatga agtggtagaa attgcagaat caacaacgaa
      421 ctctagcgct cctgttagtg ggaatgataa agaaaaagat aagagccaac ttagtcaatt
      481 ggaatcactc aacaagttcc tagatggttc taaggctcaa gaactaaatg aggataaaag
      541 caagaaaaca cagttggaga tgcttaacaa gttactaaat aaagatgttg ttgaaactaa
      601 agcgaccgaa gtcaccgagg aggttcctaa tatagagatt gcaagtggat cacccctgcc
      661 aggtgtgaag ccacagcagc ttaatgacat atacatgatc ccaaaggaaa ctatcgacat
      721 actaaaagac caagtttttg gatttgacac tttctttatc actagtcagg agccatatga
      781 gggtggagta ttgttcaaag gaaatttgcg tggacaagct tctgtgagtt acaaaaaaat
      841 agaaaaaaga ctgctggaga ctttcgggga tcagtataag cttttccttt tgataaaccc
      901 cgaggatgat aaacctgtag cagttgtggt tccaagaaag acgttacaac ctgaaacgac
      961 tgctgtcccc gaatggtttg ctgctggagc ttttggatta gttacgatat tcacattact
     1021 attacgtaac gtcccggcat tgcagtccaa cttgttatcc gtatttgaca atcctgagtt
     1081 attaaaggat gggcttgctg gagctcttgt aactgcactt tctttgggtg tacatgaagt
     1141 cagccacatt ttagttgcca aaaatgcagg agttaaactt ggggttccat attttgtacc
     1201 aagttggcag ataggctcgt ttggtggaat cacaaggatt ttaaacattg tcccaaaccg
     1261 tgaagatctt cttaaaattg cagcagccgg accattagcg ggattttcga taggtctcat
     1321 tcttcttcta ttaggatttt atattccacc ttcggatggt atcgggatca ttgttgatac
     1381 tgctgtcttt cacgaatcat ttcttgctgg tgggatagga aagctacttc ttggtgatgc
     1441 tcttaaagaa ggagcaacaa tatcattgaa cccgttggtg atctgggctt gggccggact
     1501 tctcataaac gcaattaaca gcatacctgc aggagaatta gatggtggaa gaatttctct
     1561 tgcaatatgg ggaagaaagg ctgcatctcg tttttctgct gcttctatag ttctgttggg
     1621 gctctcctct ttactagacg acgtggcatt ttattgggtt gttttaatat tcttcttaca
     1681 acgaggccca attgctccac ttgcagaaga aattagtgaa ccggataata agtatgttgc
     1741 actgggaatc atagttctag tgatgagttt acttgtttgt ttgccttacc cattcccctt
     1801 ttcgagtgaa gcagttacaa gtctttagtt ctacaaatac cacacatgag tgctttagtg
     1861 tagtggatta atcatatgga gtaataaata tttccctcta cacatctgat tgttgtttat
     1921 ggagatgaat tacaaaaaat ttctattttt tttttattga ctatgataaa ataataataa
     1981 tttggttaat taggttggac tgtaagaatt ttaattcaga tctttatatg gttgtaacta
     2041 gataactaaa caaacccata gtttttaaga aatgcattat taattgttat aa
//
LOCUS       XR_011756977             385 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839526), ncRNA.
ACCESSION   XR_011756977
VERSION     XR_011756977.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..385
                     /gene="LOC139839526"
                     /note="uncharacterized LOC139839526; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839526"
     ncRNA           1..385
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839526"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839526"
ORIGIN      
        1 gatcccattc acatccactc atcatcttca tccattttta gagagagagt aagagtttag
       61 agagagattg gaggttttgg tgaggaagaa gctcgaatcg tgcaaagtct cgggttttaa
      121 agttgttcct ttcgttctcg gctacacggt gatagtattg gtattttcca ttggcgagtt
      181 gcggattact tggaagcttt cttcaagact tcaagattgc atgcggatgg tggctcgggt
      241 aagcgcgagg attagaggac ttgcatagtt tgcgtagaag gcttgctttt ggatttatta
      301 ggattgggta gcgtgtcccc aatcgccatg ctcggctttg ttttgtatta aaagtcttat
      361 ggtcgaaaat tgtattttgg tactt
//
LOCUS       XM_071829607            1535 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable sugar
            phosphate/phosphate translocator At3g11320 (LOC139839527), mRNA.
ACCESSION   XM_071829607
VERSION     XM_071829607.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1535
                     /gene="LOC139839527"
                     /note="probable sugar phosphate/phosphate translocator
                     At3g11320; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 44 Proteins"
                     /db_xref="GeneID:139839527"
     CDS             299..1237
                     /gene="LOC139839527"
                     /codon_start=1
                     /product="probable sugar phosphate/phosphate translocator
                     At3g11320"
                     /protein_id="XP_071685708.1"
                     /db_xref="GeneID:139839527"
                     /translation="MSAIKNLPSTRFFTIGLVTSWYSSNIGVLLLNKYLLSNYGFKYP
                     IFLTMCHMTACALFSYIAIAWLKMVPMQSIRSRVQFFKISALSLIFCGSVVSGNISLR
                     YLPVSFNQAIGATTPFFTAVFAYLMTLKKEAWLTYVTLIPVVTGVIIASGGEPSFHLF
                     GFIMCIGATAARALKTVVQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLYMEENV
                     VGITIALARQDFGIVWLLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVV
                     SILIFRNPVSVTGMAGYTLTVIGVILYSEAKKRSNK"
     misc_feature    359..1210
                     /gene="LOC139839527"
                     /note="Triose-phosphate Transporter family; Region: TPT;
                     cl26744"
                     /db_xref="CDD:474852"
     polyA_site      1535
                     /gene="LOC139839527"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acatctttca aaccctttct ctgatgcaac ctgaaccata atcgtcgccg gtcgtcaatt
       61 ttcggttttt cgtcgccggt cgccggtttc tcgtcgtatt ccccaaacac actacacact
      121 tcatctcctt acacctaaaa catttctaat tcaattcaat ttagttcaat tctgtaaatg
      181 ctccacagat ctcaatcaga tccaatgaaa tcagtgccct gattccaaaa ttaagtcaac
      241 ataaatcatt ttccccaaat caatttctaa aaatcacgtc agtttcaatc tcatataaat
      301 gtcggcaata aaaaaccttc cgtcaacccg attcttcaca atcgggttag tgacgtcatg
      361 gtactcatca aacatagggg ttttattgct aaacaagtat ttgttaagca attacgggtt
      421 caagtacccg atatttttaa ccatgtgtca tatgacagct tgtgcattgt ttagttacat
      481 tgcaatagca tggttaaaaa tggtgccaat gcaaagtatt agatctaggg ttcagttttt
      541 taagatatct gcattgagtt taatattttg tggttctgtt gttagtggta atatatctct
      601 gaggtattta cctgtttcat ttaatcaagc tattggtgct actacgccat tttttactgc
      661 ggtttttgct tatttgatga cgttgaagaa ggaagcctgg cttacgtatg ttacacttat
      721 tcctgttgtc actggtgtta ttattgctag tgggggtgaa ccgagttttc atctattcgg
      781 gtttataatg tgtattggtg ctactgctgc aagagcactc aaaacggtgg tacaggggat
      841 attgctttca tctgaagggg agaagctgaa ttctatgaat cttcttttgt acatggctcc
      901 tattgctgtt gtacttttgc ttcctgcaac actatacatg gaagagaatg ttgttggcat
      961 aactatagcc cttgctaggc aagattttgg gattgtttgg ttgttgctgt tcaactctgc
     1021 acttgcctac tttgtcaact taaccaactt tttggtcaca aaacatacca gtgctcttac
     1081 acttcaggta ctgggaaacg caaaaggggc ggttgcagtg gttgtttcga tattaatatt
     1141 tagaaatcca gtttctgtaa ctgggatggc tggatacaca ctcacagtga ttggagttat
     1201 tctttatagt gaagccaaga agcgtagcaa caaatgatca tcatatcatt atattggctg
     1261 agtataacat aattagtcga ggcaggttag ggtttatgtg tttgttgctg ctgtcgctgt
     1321 catcatcttc atcacgccct ctaaattcat ttaaatatta tgctctgaaa ccttggattg
     1381 aagatggtga agcttcgcac aattacacgt gtaacagcaa catgggaaat taaaattaaa
     1441 cctttattag tttcatatat gtttaggact tatagtaaag gattgtggaa ttaatcttgt
     1501 aagaaatttg ttatatttat actccttata gatta
//
LOCUS       XM_071829608             583 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein eL33w-like (LOC139839528), mRNA.
ACCESSION   XM_071829608
VERSION     XM_071829608.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..583
                     /gene="LOC139839528"
                     /note="large ribosomal subunit protein eL33w-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139839528"
     CDS             72..410
                     /gene="LOC139839528"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL33w-like"
                     /protein_id="XP_071685709.1"
                     /db_xref="GeneID:139839528"
                     /translation="MVKGRQGERVRLYTRGTVLGYKRSKSNQYPNTSLVQIEGVNTKE
                     EVSWYQGKRMAYIYKAKVKRNGSHYRCIWGKITRPHGNTGIVRAKFTTNLPPKSMGAR
                     VRVFMYPSNI"
     misc_feature    93..407
                     /gene="LOC139839528"
                     /note="60S ribosomal protein L35a; Provisional; Region:
                     PTZ00041"
                     /db_xref="CDD:240239"
     polyA_site      583
                     /gene="LOC139839528"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacaaacaca aaactagggt ttacaatctt catcatcatc ttcttcagcg cagtcgtctg
       61 ttgcagcgaa aatggtgaaa ggacgtcaag gtgaacgtgt cagactctac accagaggaa
      121 ctgttctcgg ttacaagagg tcaaagtcaa accagtatcc aaacacatca ttggttcaaa
      181 ttgaaggagt gaacacgaag gaagaagtat catggtacca aggcaaacgt atggcttata
      241 tctacaaggc taaagtgaaa aggaatggat cacattacag gtgtatttgg ggcaaaatta
      301 ctaggcctca tggtaacact ggtattgtaa gggctaagtt taccactaat cttcctccta
      361 aatccatggg agctagagtt agggtgttca tgtacccaag caatatttaa gtttgtcgct
      421 gttgagaaga agggagatag tgttgctggt gcttaaatgg attcctatta caattttgtg
      481 ttcttacttt tttgtttgat ggaattagtt tatgtagcag ggtgatgctt atactgtgac
      541 aaatcctttt gttttcaatg aatttgagtt tattttggat tta
//
LOCUS       XM_071829609             923 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839529), mRNA.
ACCESSION   XM_071829609
VERSION     XM_071829609.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..923
                     /gene="LOC139839529"
                     /note="uncharacterized LOC139839529; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839529"
     CDS             66..734
                     /gene="LOC139839529"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685710.1"
                     /db_xref="GeneID:139839529"
                     /translation="MKMPMASSKSQSSSVVQRLVLLTSVIFNLFVVDSSPLDLPVQNQ
                     LRGGGYRGLKSFMETASGNNITFDCSPSGPCIYCSYSEKKDETYRCSETGYRIPMKCA
                     KVVTPVDEDNENKRHKGRANLENTNDKLELHESNAEDSTMSIRQRNMLEDSSDVEVGK
                     VAYVTYRSCMPAVSEEKLSVLGFEALMLLLLVSSSFVIFRRKGTLIMPFMPGAVRVPS
                     NPRF"
     polyA_site      923
                     /gene="LOC139839529"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatgatgatt accggaaaag gaaaaaaagg tacttattag ggaaaagctg ctgcaattag
       61 aatctatgaa gatgccgatg gcgtcttcca agtcccaatc atcatccgtt gttcaacgtc
      121 tagttttgtt aacctccgtt atcttcaatt tgttcgttgt tgattcttct ccgttagatc
      181 tacctgtaca aaaccaatta cgaggaggag ggtacagagg tttgaaaagt tttatggaaa
      241 cagctagtgg caataacatt actttcgatt gctctccttc aggtccttgc atctattgca
      301 gttattctga aaagaaagat gaaacttatc gctgcagtga aactgggtat cgtattccta
      361 tgaagtgtgc caaagttgtt actccagtag atgaagataa tgagaataaa aggcataagg
      421 gccgagctaa ccttgaaaat actaacgaca agctagaact acatgagtcg aatgcagaag
      481 attcgactat gtcaataaga caaagaaata tgttggaaga ttcatccgac gtggaagttg
      541 gaaaggtagc ctatgtaact tatagaagct gtatgcctgc tgtaagtgag gagaagctat
      601 ctgtccttgg ctttgaggca ttgatgttgt tattgctggt aagtagttcg tttgtaatct
      661 tcagacgtaa agggacttta atcatgccat ttatgccagg agcagtaaga gttcctagta
      721 acccaaggtt ttaaggttgc atctgcacat gatttaattt ggatcatcta tgaatctatg
      781 atacacgtac ttttctggta tagattgatc aggggccagt gaaggttaca actttttctc
      841 tatttgattt tcttgtatga taaccacata aagagacgat tcttttattt gaaagcaata
      901 gattacaaaa acgtttatat gta
//
LOCUS       XM_071829610            1667 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rop guanine nucleotide
            exchange factor 12-like (LOC139839530), mRNA.
ACCESSION   XM_071829610
VERSION     XM_071829610.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1667
                     /gene="LOC139839530"
                     /note="rop guanine nucleotide exchange factor 12-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 26 Proteins"
                     /db_xref="GeneID:139839530"
     CDS             112..1497
                     /gene="LOC139839530"
                     /codon_start=1
                     /product="rop guanine nucleotide exchange factor 12-like"
                     /protein_id="XP_071685711.1"
                     /db_xref="GeneID:139839530"
                     /translation="MEEDKSDLDPELESIYADMELMKERFGKLLLGEDMSGGGKGVSS
                     ALALSNAITNLAASVFGEISKLEPMAPESKARWRKEIDWLLTVTDHIVEFVASKQNNN
                     GVTMEVMVTRQRSDVAVNIPALKKLDAMLMECLENFRDQDEFTYASKDDVSKSKKKRE
                     GDKWWLPTPKVPPNGLSDTTRKWLLFQKDSVNQVLKATMAMNAHVLTEMEIPESYIDS
                     LPKNGRASLGDSVYKNITVDQFDPDYFLSVMDLSSEHKILDLKNRIEASIVIWRRKMT
                     NKDGKSGWGSSVSIEKREQFEDRAETILLILKRRYPGIPQSALDASKIENNRDIGHAI
                     LESYSRILESLAHKVMSRIEDVLHADNLVKNKSGDIKRNPLNDFVSMASGKFLNAKEE
                     LENINFSDAPISMTLSDFTSWTLEHENGTKDDLSNGNALTKQSSAANSKKLTYLERLE
                     TLGGRSPSTHK"
     misc_feature    160..1206
                     /gene="LOC139839530"
                     /note="PRONE (Plant-specific Rop nucleotide exchanger);
                     Region: PRONE; pfam03759"
                     /db_xref="CDD:427490"
ORIGIN      
        1 tctcgtttcc gattcacctt ttttgtagtt ttgttcaaat ccttttcatt ttttgtccag
       61 cttttgtgct cgaattcggt aatagttaga gctatacata caagaattat catggaagag
      121 gataaatcag atttagatcc tgaacttgaa tccatatatg cagatatgga attgatgaag
      181 gagaggtttg gtaagctatt attgggtgag gatatgtcag gtggagggaa aggtgtttcg
      241 tcggctttgg cattgtcaaa tgccatcacg aatctagcag cttctgtatt tggagaaatc
      301 tcgaaattag aacctatggc gccagaaagt aaagcgaggt ggcgtaaaga aatcgattgg
      361 ttattaacag tcactgatca cattgttgaa tttgtggctt caaaacaaaa taataatggc
      421 gtaacaatgg aggtaatggt tacaaggcaa cgaagcgatg ttgctgtgaa tattccagcg
      481 ctaaagaagc ttgacgcaat gctcatggaa tgtttagaga attttagaga tcaggatgaa
      541 tttacttacg cgtctaaaga tgatgtatcg aaatcaaaga agaaaagaga aggagataaa
      601 tggtggttac cgactccaaa agttccgcca aacggtttat ctgatactac aagaaaatgg
      661 ttgttgtttc aaaaagactc ggtgaaccaa gtacttaaag caaccatggc tatgaacgct
      721 catgttctta ccgaaatgga aatccccgaa agttacattg actccctccc caagaatgga
      781 cgggcaagcc taggagattc agtctataaa aatattactg ttgatcaatt tgatccggat
      841 tattttcttt ccgtgatgga cttatcatca gagcataaaa ttcttgatct caagaacagg
      901 attgaggcat caattgtgat atggaggagg aaaatgacga ataaagatgg aaaatcggga
      961 tggggttcaa gtgtgagtat agaaaaaaga gaacaatttg aagatagagc agagacgata
     1021 ttacttatat taaaacgtcg ttaccctggt atcccgcaat ctgcactaga tgccagcaaa
     1081 atcgaaaaca atcgagatat cggccacgcc attcttgaga gctattcaag aatactcgaa
     1141 agcttagcac acaaagtgat gtcacgaatt gaagatgtat tgcatgcaga taatcttgta
     1201 aaaaataaat caggggatat aaaaagaaac cctcttaatg atttcgtatc aatggcatca
     1261 ggaaaattcc tcaatgcaaa agaagagttg gaaaatataa acttttccga tgcaccaata
     1321 tcaatgacgt tatctgactt cacgagttgg actttagaac atgaaaatgg gacaaaagat
     1381 gacttatcaa atggaaacgc gttgacaaaa caatcatcgg ctgcaaacag caagaaactt
     1441 acatatttag aaaggctaga gactttagga ggaagaagcc catcgacaca caaatgagag
     1501 ataaagtcca taagattata gaaaaaaagt ttcatgtgta tgtatattta gacctatata
     1561 gagtatgtaa tttgttcttg tgtaaatgca ggaagtataa aattatccta aaggatcttt
     1621 tcaactttga ttatagaact tattcaatag aggtggcatt ggttgag
//
LOCUS       XM_071829611            1957 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839531), mRNA.
ACCESSION   XM_071829611
VERSION     XM_071829611.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1957
                     /gene="LOC139839531"
                     /note="uncharacterized LOC139839531; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839531"
     CDS             165..1799
                     /gene="LOC139839531"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685712.1"
                     /db_xref="GeneID:139839531"
                     /translation="MEFFEKLVAVRLKTHLDKYLVADDDQVNVRQSRSGGGTRRARWL
                     IEHVDSNSHVIRLKSCYGSYLTASNTPFLLGMTGKKVVLQTLQQESNKDLAMEWQPVR
                     DGFQVKLKTCDGTYLRANGAMIPWRNTVTHDSSNTSSNHNWILFDVEGVDVQEDEEFN
                     DYLAMVTGYSSVSDHEISGREFGGGSPAVSIKSSFSFSPRSPILSSLFNKGRFSFQDK
                     TTTKKPTTASFLGVMDLFHNAKAVRLKNHHNKYLHAEEDEESVGQDRNGASKNNRWTV
                     EFVTNTSDDHNNKPTIIRLKSCYNKYLTASNQPFLLGMTGRKVLQTVPRRLDSSVEWE
                     PIREGNQVKLRTRYGQYLRANGGLPPWRNSVTHDVPHRTATQEWVLWDVDVVDIVVQS
                     PAPGPPPPLPVVNHSDSFTSTTSSEENYYGSASPKANFNHQHQSTNSDWHRSSSNVSS
                     PPKFEDGRTIYYHVISEDFGEMDENAQGFAITFKGNNVVELTRKLEEETGLKDVTVCT
                     RSPLNGKLYPLRLQLPPNNVTMKVVVVQNSYFDSEV"
     misc_feature    165..611
                     /gene="LOC139839531"
                     /note="fascin-like domain, beta-trefoil fold, found in
                     Arabidopsis thaliana actin cross-linking protein (ACP) and
                     similar proteins; Region: beta-trefoil_FSCN_ACP-like;
                     cd23340"
                     /db_xref="CDD:467448"
     misc_feature    861..1307
                     /gene="LOC139839531"
                     /note="fascin-like domain, beta-trefoil fold, found in the
                     fascin-like family; Region: beta-trefoil_FSCN-like;
                     cl49611"
                     /db_xref="CDD:483951"
     polyA_site      1957
                     /gene="LOC139839531"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaagtcggt acaactctat catatatgtt tattttaatt tgaataccat gcaataatta
       61 tcatatcata tacaagtttt atatatattt ttatttacat aaataccacg tttttaagac
      121 ttaattgtgt aattatttgt tcttcaatag ttacaatcta taaaatggaa ttctttgaga
      181 aattagtggc ggtgagactg aaaacacacc tagacaagta cttggtagcc gacgacgatc
      241 aagtgaacgt ccgacaaagt cgaagtggtg gtggaacacg acgagcacgg tggttgatcg
      301 aacacgttga ctcaaacagt cacgtgatcc gtctcaaaag ctgttacggc agttacttaa
      361 cggcgtcaaa tacgcctttt cttctaggca tgacaggtaa aaaagttgtg cttcaaacgt
      421 tgcaacaaga aagtaataaa gatttagcga tggaatggca accggtgagg gacgggtttc
      481 aagtgaagtt aaaaacgtgt gacgggacgt atttgagggc gaacggagcg atgataccgt
      541 ggaggaatac ggtgacacat gatagtagta atacgagttc gaatcataat tggatattgt
      601 ttgatgttga gggtgttgat gtacaagaag atgaggagtt taatgattat ttggcgatgg
      661 ttacgggtta ttcgtcggtt tcggatcatg aaatttcggg tcgggaattt ggtggtggat
      721 cgcctgcagt atcgattaag tcttcgttta gcttctcacc caggagtccc attttatcgt
      781 cattattcaa caagggaagg ttttcatttc aagacaaaac aacaacaaaa aaaccaacaa
      841 cagcgtcgtt tttaggagta atggatctat tccacaacgc aaaagccgta cgtctcaaaa
      901 accatcataa caaatatctt cacgccgaag aagatgaaga atccgtcggc caagatcgga
      961 acggcgcttc taaaaacaac cggtggacag tcgaatttgt caccaatacc tccgacgatc
     1021 acaacaacaa accaacaatc atccgtctta aatcatgtta caacaagtac ttaactgctt
     1081 caaaccagcc tttcttactc ggtatgactg gccggaaagt gcttcaaacg gtgccacgtc
     1141 ggctagactc gtcggtagag tgggagccca ttcgggaagg gaatcaggta aagcttagga
     1201 cgaggtacgg gcagtacttg agggctaacg gtgggctgcc accctggaga aactcggtta
     1261 cacatgatgt acctcaccgg acggctacac aagagtgggt tctatgggat gttgatgttg
     1321 tggatattgt tgtgcagtcg ccggcaccgg gaccaccgcc gccgttgccg gtggttaatc
     1381 attctgactc gtttacttca actacctcat cggaagagaa ttattacggc agtgcatccc
     1441 cgaaagccaa tttcaaccat caacatcagt cgactaatag tgattggcat cgtagcagca
     1501 gcaatgtcag ctcacctcca aagtttgaag atggaaggac aatatattac catgtcattt
     1561 ctgaagattt tggagaaatg gatgaaaatg cgcaaggatt tgccattacg tttaagggca
     1621 ataacgttgt tgaattaacc cgaaaactag aggaagaaac ggggctaaag gacgtaactg
     1681 tatgtacccg cagtccacta aacggaaagc tttaccctct ccgcttgcaa cttccgccca
     1741 acaacgttac catgaaagtt gtggttgttc agaattctta ctttgattca gaagtttgat
     1801 ttattatcat tatattagtg atataataaa ataataattg tgtttttgta cataaggaag
     1861 gatataaatt ttgagattgc tagtgtgttt gataatgata gtggtagtat atgtataagt
     1921 tcaactttta tgtttatatg atgcaggatt ttattta
//
LOCUS       XM_071829612            1541 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pectate lyase-like
            (LOC139839532), transcript variant X1, mRNA.
ACCESSION   XM_071829612
VERSION     XM_071829612.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1541
                     /gene="LOC139839532"
                     /note="pectate lyase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 115
                     Proteins"
                     /db_xref="GeneID:139839532"
     CDS             157..1413
                     /gene="LOC139839532"
                     /codon_start=1
                     /product="pectate lyase-like"
                     /protein_id="XP_071685713.1"
                     /db_xref="GeneID:139839532"
                     /translation="MSPNTGNAHLDGFMEERAHNATNAAYKAYNPNPESAVLNFSKQV
                     QESLEGSTNSTRRNLRGRGRCMATNPIDKCWRCNKDWAKNRQALSECARGFGEHTTGG
                     RGGRIYVVTDNSDNDVLNPKKGTLRYGVIQNKPLWIIFQRSMVITLKQELMLNHDKTI
                     DGRGVQVHIAYGAGLTIQFVHNVIIHGIRIHHIVSKCGGMIRDSVHHYGLRTVSDGDG
                     ISIFGSSKVWVDHVSLDHCKDGLIDAIMASTAITISNCKFNHHNDVMLLGAHDSFSGD
                     EIMQVTIAFNRFGNGCVQRMPACRWGFFHVVNNDYNKWHMYAIGGSRNPTIISQGNRF
                     RAPDNIHAKEITHRDHYPKKIWKKWRWRTVNDLYLNGAFFVASGDRSEIAQQLKKHMV
                     QAKDGSAVGLLTRYSGMLACTPGRPC"
     misc_feature    178..333
                     /gene="LOC139839532"
                     /note="Pectate lyase, N terminus; Region: Pec_lyase_N;
                     pfam04431"
                     /db_xref="CDD:398232"
     misc_feature    586..1170
                     /gene="LOC139839532"
                     /note="Amb_all domain; Region: Amb_all; smart00656"
                     /db_xref="CDD:214765"
ORIGIN      
        1 gattcctatc aaaatgctac agaactccag ctatcaaaat aataaatttt attaggtgga
       61 aagagcaaag cggttattct aaatatgtct aaagactcat gacacccatc tttaaagcat
      121 cccctttttt ccagttcgac tgttttagcc ggaacaatga gcccgaatac aggtaatgcg
      181 catttagatg gcttcatgga agaacgtgct cacaatgcca caaatgcagc ttataaagca
      241 tacaatccta atcccgaatc agcggtcctc aatttcagca aacaagtcca agagtcactg
      301 gaggggtcta caaactcgac aaggagaaac ctacgaggac gtggcagatg catggctacg
      361 aaccctatag acaagtgttg gaggtgcaac aaggactggg ctaaaaaccg gcaagcgtta
      421 tctgaatgtg cgcgtggatt tggagagcat acgacaggtg gcaggggtgg tcgtatatac
      481 gtggtaacag ataattcgga caacgatgta ttgaatccaa aaaaaggaac ccttcgatac
      541 ggagtgatcc aaaacaaacc attatggatc atctttcaaa gatcaatggt aatcaccctt
      601 aaacaagaac ttatgttgaa ccacgacaaa accatcgatg gtcggggcgt tcaagttcac
      661 atagcatatg gagcgggact cacaattcaa tttgtacata atgtcatcat ccatggaatc
      721 agaatacatc acattgtgtc caaatgtggg ggcatgatta gagattcggt acatcattat
      781 ggattaagaa cagttagtga tggagacggt atttcgatat ttggttctag taaagtgtgg
      841 gttgatcatg tgtcgttgga tcattgtaaa gatggactaa tagatgctat tatggctagc
      901 accgctataa cgatttctaa ctgtaaattt aatcatcata atgatgtaat gttgttgggg
      961 gcgcatgata gtttttcggg agatgagata atgcaagtga cgatagcgtt taaccgtttt
     1021 ggtaatggat gtgtgcagag gatgcctgcg tgtcgatggg gattttttca tgtagtgaac
     1081 aatgattaca acaagtggca tatgtatgct attgggggta gcaggaaccc aactattatt
     1141 agccaaggca accgatttag ggctcctgat aacatccacg caaaagagat aacccatcga
     1201 gatcactatc ctaaaaaaat atggaaaaaa tggagatgga gaacggtgaa tgacctctat
     1261 ctaaacgggg cattcttcgt agcatcgggt gaccgttcag agatcgctca acaactcaaa
     1321 aagcatatgg ttcaagctaa ggatggctca gctgtcggtc tgctcacacg atactctggt
     1381 atgttagcat gcacaccagg cagaccttgc taggtaacac aatagttaat tacgcataac
     1441 aattaaattg ctgtaagatt ttatttgtat ttgattttta tattagttgg tacatagcta
     1501 attgatcaaa cacgttagcc aacttgtaca ttgaagttac a
//
LOCUS       XM_071829613            1634 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pectate lyase-like
            (LOC139839532), transcript variant X2, mRNA.
ACCESSION   XM_071829613
VERSION     XM_071829613.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1634
                     /gene="LOC139839532"
                     /note="pectate lyase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 115
                     Proteins"
                     /db_xref="GeneID:139839532"
     CDS             250..1506
                     /gene="LOC139839532"
                     /codon_start=1
                     /product="pectate lyase-like"
                     /protein_id="XP_071685714.1"
                     /db_xref="GeneID:139839532"
                     /translation="MSPNTGNAHLDGFMEERAHNATNAAYKAYNPNPESAVLNFSKQV
                     QESLEGSTNSTRRNLRGRGRCMATNPIDKCWRCNKDWAKNRQALSECARGFGEHTTGG
                     RGGRIYVVTDNSDNDVLNPKKGTLRYGVIQNKPLWIIFQRSMVITLKQELMLNHDKTI
                     DGRGVQVHIAYGAGLTIQFVHNVIIHGIRIHHIVSKCGGMIRDSVHHYGLRTVSDGDG
                     ISIFGSSKVWVDHVSLDHCKDGLIDAIMASTAITISNCKFNHHNDVMLLGAHDSFSGD
                     EIMQVTIAFNRFGNGCVQRMPACRWGFFHVVNNDYNKWHMYAIGGSRNPTIISQGNRF
                     RAPDNIHAKEITHRDHYPKKIWKKWRWRTVNDLYLNGAFFVASGDRSEIAQQLKKHMV
                     QAKDGSAVGLLTRYSGMLACTPGRPC"
     misc_feature    271..426
                     /gene="LOC139839532"
                     /note="Pectate lyase, N terminus; Region: Pec_lyase_N;
                     pfam04431"
                     /db_xref="CDD:398232"
     misc_feature    679..1263
                     /gene="LOC139839532"
                     /note="Amb_all domain; Region: Amb_all; smart00656"
                     /db_xref="CDD:214765"
ORIGIN      
        1 tccaaccatt taaagaggac aagataccaa gtgctacaac aaccaaaaaa ggaagataga
       61 taatatttgt tatttacatc ctcgtattgg attcctatca aaatgctaca gaactccagc
      121 tatcaaaata ataaagcaat tttattaggt ggaaagagca aagcggttat tctaaatatg
      181 tctaaagact catgacaccc atctttaaag catccccttt tttccagttc gactgtttta
      241 gccggaacaa tgagcccgaa tacaggtaat gcgcatttag atggcttcat ggaagaacgt
      301 gctcacaatg ccacaaatgc agcttataaa gcatacaatc ctaatcccga atcagcggtc
      361 ctcaatttca gcaaacaagt ccaagagtca ctggaggggt ctacaaactc gacaaggaga
      421 aacctacgag gacgtggcag atgcatggct acgaacccta tagacaagtg ttggaggtgc
      481 aacaaggact gggctaaaaa ccggcaagcg ttatctgaat gtgcgcgtgg atttggagag
      541 catacgacag gtggcagggg tggtcgtata tacgtggtaa cagataattc ggacaacgat
      601 gtattgaatc caaaaaaagg aacccttcga tacggagtga tccaaaacaa accattatgg
      661 atcatctttc aaagatcaat ggtaatcacc cttaaacaag aacttatgtt gaaccacgac
      721 aaaaccatcg atggtcgggg cgttcaagtt cacatagcat atggagcggg actcacaatt
      781 caatttgtac ataatgtcat catccatgga atcagaatac atcacattgt gtccaaatgt
      841 gggggcatga ttagagattc ggtacatcat tatggattaa gaacagttag tgatggagac
      901 ggtatttcga tatttggttc tagtaaagtg tgggttgatc atgtgtcgtt ggatcattgt
      961 aaagatggac taatagatgc tattatggct agcaccgcta taacgatttc taactgtaaa
     1021 tttaatcatc ataatgatgt aatgttgttg ggggcgcatg atagtttttc gggagatgag
     1081 ataatgcaag tgacgatagc gtttaaccgt tttggtaatg gatgtgtgca gaggatgcct
     1141 gcgtgtcgat ggggattttt tcatgtagtg aacaatgatt acaacaagtg gcatatgtat
     1201 gctattgggg gtagcaggaa cccaactatt attagccaag gcaaccgatt tagggctcct
     1261 gataacatcc acgcaaaaga gataacccat cgagatcact atcctaaaaa aatatggaaa
     1321 aaatggagat ggagaacggt gaatgacctc tatctaaacg gggcattctt cgtagcatcg
     1381 ggtgaccgtt cagagatcgc tcaacaactc aaaaagcata tggttcaagc taaggatggc
     1441 tcagctgtcg gtctgctcac acgatactct ggtatgttag catgcacacc aggcagacct
     1501 tgctaggtaa cacaatagtt aattacgcat aacaattaaa ttgctgtaag attttatttg
     1561 tatttgattt ttatattagt tggtacatag ctaattgatc aaacacgtta gccaacttgt
     1621 acattgaagt taca
//
LOCUS       XM_071829614            1502 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pectate lyase-like
            (LOC139839532), transcript variant X3, mRNA.
ACCESSION   XM_071829614
VERSION     XM_071829614.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1502
                     /gene="LOC139839532"
                     /note="pectate lyase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 116
                     Proteins"
                     /db_xref="GeneID:139839532"
     CDS             118..1374
                     /gene="LOC139839532"
                     /codon_start=1
                     /product="pectate lyase-like"
                     /protein_id="XP_071685715.1"
                     /db_xref="GeneID:139839532"
                     /translation="MSPNTGNAHLDGFMEERAHNATNAAYKAYNPNPESAVLNFSKQV
                     QESLEGSTNSTRRNLRGRGRCMATNPIDKCWRCNKDWAKNRQALSECARGFGEHTTGG
                     RGGRIYVVTDNSDNDVLNPKKGTLRYGVIQNKPLWIIFQRSMVITLKQELMLNHDKTI
                     DGRGVQVHIAYGAGLTIQFVHNVIIHGIRIHHIVSKCGGMIRDSVHHYGLRTVSDGDG
                     ISIFGSSKVWVDHVSLDHCKDGLIDAIMASTAITISNCKFNHHNDVMLLGAHDSFSGD
                     EIMQVTIAFNRFGNGCVQRMPACRWGFFHVVNNDYNKWHMYAIGGSRNPTIISQGNRF
                     RAPDNIHAKEITHRDHYPKKIWKKWRWRTVNDLYLNGAFFVASGDRSEIAQQLKKHMV
                     QAKDGSAVGLLTRYSGMLACTPGRPC"
     misc_feature    139..294
                     /gene="LOC139839532"
                     /note="Pectate lyase, N terminus; Region: Pec_lyase_N;
                     pfam04431"
                     /db_xref="CDD:398232"
     misc_feature    547..1131
                     /gene="LOC139839532"
                     /note="Amb_all domain; Region: Amb_all; smart00656"
                     /db_xref="CDD:214765"
ORIGIN      
        1 agtccagcct cccctaggat ttcaactcgg gacccgcagg aattccacaa agttctcgta
       61 gataccactc tgtcaaaggc tcggtggtgg aataagaata ctgttttagc cggaacaatg
      121 agcccgaata caggtaatgc gcatttagat ggcttcatgg aagaacgtgc tcacaatgcc
      181 acaaatgcag cttataaagc atacaatcct aatcccgaat cagcggtcct caatttcagc
      241 aaacaagtcc aagagtcact ggaggggtct acaaactcga caaggagaaa cctacgagga
      301 cgtggcagat gcatggctac gaaccctata gacaagtgtt ggaggtgcaa caaggactgg
      361 gctaaaaacc ggcaagcgtt atctgaatgt gcgcgtggat ttggagagca tacgacaggt
      421 ggcaggggtg gtcgtatata cgtggtaaca gataattcgg acaacgatgt attgaatcca
      481 aaaaaaggaa cccttcgata cggagtgatc caaaacaaac cattatggat catctttcaa
      541 agatcaatgg taatcaccct taaacaagaa cttatgttga accacgacaa aaccatcgat
      601 ggtcggggcg ttcaagttca catagcatat ggagcgggac tcacaattca atttgtacat
      661 aatgtcatca tccatggaat cagaatacat cacattgtgt ccaaatgtgg gggcatgatt
      721 agagattcgg tacatcatta tggattaaga acagttagtg atggagacgg tatttcgata
      781 tttggttcta gtaaagtgtg ggttgatcat gtgtcgttgg atcattgtaa agatggacta
      841 atagatgcta ttatggctag caccgctata acgatttcta actgtaaatt taatcatcat
      901 aatgatgtaa tgttgttggg ggcgcatgat agtttttcgg gagatgagat aatgcaagtg
      961 acgatagcgt ttaaccgttt tggtaatgga tgtgtgcaga ggatgcctgc gtgtcgatgg
     1021 ggattttttc atgtagtgaa caatgattac aacaagtggc atatgtatgc tattgggggt
     1081 agcaggaacc caactattat tagccaaggc aaccgattta gggctcctga taacatccac
     1141 gcaaaagaga taacccatcg agatcactat cctaaaaaaa tatggaaaaa atggagatgg
     1201 agaacggtga atgacctcta tctaaacggg gcattcttcg tagcatcggg tgaccgttca
     1261 gagatcgctc aacaactcaa aaagcatatg gttcaagcta aggatggctc agctgtcggt
     1321 ctgctcacac gatactctgg tatgttagca tgcacaccag gcagaccttg ctaggtaaca
     1381 caatagttaa ttacgcataa caattaaatt gctgtaagat tttatttgta tttgattttt
     1441 atattagttg gtacatagct aattgatcaa acacgttagc caacttgtac attgaagtta
     1501 ca
//
LOCUS       XM_071829615             654 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ras-related protein
            Rab2BV-like (LOC139839533), mRNA.
ACCESSION   XM_071829615
VERSION     XM_071829615.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..654
                     /gene="LOC139839533"
                     /note="ras-related protein Rab2BV-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 119 Proteins"
                     /db_xref="GeneID:139839533"
     CDS             1..654
                     /gene="LOC139839533"
                     /codon_start=1
                     /product="ras-related protein Rab2BV-like"
                     /protein_id="XP_071685716.1"
                     /db_xref="GeneID:139839533"
                     /translation="MAYKVDHGYDYLFKIVLIGDSGVGKSNILARFTRNEFCLESKST
                     IGVEFATRTVQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDITKAQSFQN
                     VQRWLRELREHADSNIVIMLAGNKADLSNNRVVKESDGQKLAEQEGLVFLETSALEAL
                     NVEKAFQMILLDIHKIVSKKALAAQEAASSSTSIPSHTTTIKVGDYDNKSSRKCCSN"
     misc_feature    1..651
                     /gene="LOC139839533"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    28..42
                     /gene="LOC139839533"
                     /note="Rab subfamily motif 1 (RabSF1); other site"
                     /db_xref="CDD:206660"
     misc_feature    55..78
                     /gene="LOC139839533"
                     /note="G1 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(61..81,112..114,121..123,130..132,208..210,373..378,
                     382..384,463..471)
                     /gene="LOC139839533"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206660"
     misc_feature    order(79..114,118..129)
                     /gene="LOC139839533"
                     /note="Rab subfamily motif 2 (RabSF2); other site"
                     /db_xref="CDD:206660"
     misc_feature    order(109..111,124..150)
                     /gene="LOC139839533"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(124..126,136..159,178..180,184..186)
                     /gene="LOC139839533"
                     /note="putative GEF interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206660"
     misc_feature    130..132
                     /gene="LOC139839533"
                     /note="G2 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(133..135,139..147,190..192,196..198,217..222,
                     229..231,241..243,247..258,517..519)
                     /gene="LOC139839533"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     misc_feature    order(133..138,142..144,196..201,220..222,226..228,
                     232..240)
                     /gene="LOC139839533"
                     /note="putative GDI interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206660"
     misc_feature    133..147
                     /gene="LOC139839533"
                     /note="Rab family motif 1 (RabF1); other site"
                     /db_xref="CDD:206660"
     misc_feature    184..198
                     /gene="LOC139839533"
                     /note="Rab family motif 2 (RabF2); other site"
                     /db_xref="CDD:206660"
     misc_feature    199..210
                     /gene="LOC139839533"
                     /note="G3 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(208..210,214..246)
                     /gene="LOC139839533"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206660"
     misc_feature    217..234
                     /gene="LOC139839533"
                     /note="Rab family motif 3 (RabF3); other site"
                     /db_xref="CDD:206660"
     misc_feature    241..255
                     /gene="LOC139839533"
                     /note="Rab family motif 4 (RabF4); other site"
                     /db_xref="CDD:206660"
     misc_feature    268..285
                     /gene="LOC139839533"
                     /note="Rab family motif 5 (RabF5); other site"
                     /db_xref="CDD:206660"
     misc_feature    352..366
                     /gene="LOC139839533"
                     /note="Rab subfamily motif 3 (RabSF3); other site"
                     /db_xref="CDD:206660"
     misc_feature    373..384
                     /gene="LOC139839533"
                     /note="G4 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    463..471
                     /gene="LOC139839533"
                     /note="G5 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    511..522
                     /gene="LOC139839533"
                     /note="Rab subfamily motif 4 (RabSF4); other site"
                     /db_xref="CDD:206660"
ORIGIN      
        1 atggcatata aggttgatca tggctatgat tatttattta agatagtttt aattggtgat
       61 tctggtgttg gaaaatctaa cattcttgca cggtttacgc gtaatgaatt ctgtttggag
      121 tctaaatcca ccattggtgt cgaattcgct acaaggaccg ttcaggttga aggtaagacg
      181 gtaaaagcac aaatatggga cactgcaggt caagagaggt acagagccat cacgagtgct
      241 tattacagag gagctgtggg tgccctcttg atttatgaca tcacaaaggc ccaatcattt
      301 caaaacgttc aacgatggct aagagaactt agggagcatg cagactcgaa cattgtcatc
      361 atgttggctg gaaacaaggc tgatttgagc aataacagag ttgttaaaga aagtgatgga
      421 caaaagttag ctgaacaaga aggattggtg tttctagaaa cttccgcact cgaagcattg
      481 aatgttgaaa aggcgtttca gatgatttta ttggatattc ataagattgt aagcaagaaa
      541 gcattggctg ctcaagaagc tgcgtcgtct tctacttcga ttcctagtca tactactact
      601 ataaaagttg gtgattatga taacaagtct tcaaggaaat gttgttctaa ctag
//
LOCUS       XM_071829616            1794 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides folylpolyglutamate
            synthase-like (LOC139839534), mRNA.
ACCESSION   XM_071829616
VERSION     XM_071829616.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1794
                     /gene="LOC139839534"
                     /note="folylpolyglutamate synthase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839534"
     CDS             32..1585
                     /gene="LOC139839534"
                     /codon_start=1
                     /product="folylpolyglutamate synthase-like"
                     /protein_id="XP_071685717.1"
                     /db_xref="GeneID:139839534"
                     /translation="MSQGYDEAMGALSSLITKKNRSHKYVVDDRFQRMFDYVQILDLK
                     EPISQMKIIHVAGTKGKGSTCVFTESILRNCGFRTGLFTSPHLIDVRERFRLDGEDIC
                     EEKFLTYFWWCWNRLKTKCSGDMPMPTLFHFLALLAFKIFSDEQVDAAIIEVGLGGKI
                     DATNVIQTPIVCGITPLGYDHTEILGNTLEAIAGEKAGIFKKCVPAFTVSQPHEAMQV
                     LKDKAFQLDVPLQVTKRVDSNLLNGLPLGLAGEHQYINAGLAVMLSSTWLQRTGHLQF
                     EPVDQTGSLPEQFIKGLTTASLQGRAQIIRDICSQGDLIFYLDGAHSPESMEVCANWF
                     SDAVKENDGKQRCSSNQKLNNRISENSRKDSLQPLQILLFNCMSVRDPQLLFPPLLDT
                     CAEHGIKFNKALFVPNMSLYTKVGSSSSLPPTDAQVDQTWQLTLQRVWENIMCGNFKK
                     DEVLSSENKDLDERSATSCKNSVVFSSLPLAIKWLRDTAEQNKSVRLQVLVTGSLHLV
                     GDVIKLVKK"
     misc_feature    44..1582
                     /gene="LOC139839534"
                     /note="tetrahydrofolylpolyglutamate synthase; Region:
                     PLN02881"
                     /db_xref="CDD:215476"
ORIGIN      
        1 tcgacaaaat acgcacacca atcatttcaa catgtcacaa ggttatgatg aggcaatggg
       61 tgccctatcc tctctcatta ccaagaagaa tcgttctcat aagtacgttg tcgatgaccg
      121 attccagaga atgtttgact atgttcagat tttggatttg aaagagccga tttcgcaaat
      181 gaaaatcatt catgttgcag gtactaaagg aaagggatca acgtgtgtat tcacggaatc
      241 tatattacgt aattgtggct ttcgcactgg gttattcacg tctcctcatc tcattgatgt
      301 tagagaaaga tttcgattag atggtgagga catatgcgaa gagaagtttt tgacgtactt
      361 ctggtggtgt tggaataggt tgaagacaaa atgcagtggt gatatgccga tgccaacgtt
      421 attccacttc cttgctttac ttgctttcaa aatttttagt gatgaacaag tagatgctgc
      481 tattatcgag gttggactag gagggaagat tgatgcaacc aacgtgattc agacaccgat
      541 agtgtgtggt atcacaccgc taggttatga ccataccgaa atccttggaa atactctgga
      601 ggcaattgca ggggagaaag ctggtatctt taagaaatgt gttcctgcat ttactgtttc
      661 acaaccacat gaagctatgc aagtacttaa agataaagct ttccagttgg atgtgcccct
      721 gcaagtgaca aaacgggtgg acagtaattt gctaaatgga ttacctctcg ggcttgcagg
      781 cgagcatcaa tatataaatg cagggcttgc tgttatgtta agctctacat ggcttcaaag
      841 gactggtcac cttcaattcg aacctgtcga tcaaactggt tctctgccag agcaattcat
      901 caaagggtta acaacagcaa gtttacaagg acgggcccag attattcgtg atatttgtag
      961 ccaaggtgac ctgatatttt atttggacgg tgcacatagc cccgaaagta tggaagtttg
     1021 tgcaaattgg ttttctgatg cggttaaaga aaatgatgga aaacaaagat gctcaagcaa
     1081 ccagaaacta aataatcgca tcagtgaaaa ctcacggaag gactccttac agccgttaca
     1141 gatattgctg ttcaattgta tgtcagtgag ggacccgcaa ttgctctttc caccgctgct
     1201 ggacacatgt gctgagcatg gcataaagtt taacaaggca ttatttgtac caaacatgtc
     1261 gctctacacc aaagttggat ctagctcatc tttaccccca actgatgctc aagttgacca
     1321 aacatggcaa ctgacacttc aaagagtatg ggagaacatc atgtgtggaa atttcaaaaa
     1381 agatgaggtc ttatcgagtg agaataaaga tctggatgag aggagtgcta caagttgcaa
     1441 aaacagtgtg gtgttctcat ccctcccgtt ggccattaaa tggttaaggg ataccgctga
     1501 acaaaataag tctgttcggt tgcaggtgtt ggtaactggt tcgttacatt tggtgggtga
     1561 cgttataaaa ttagtgaaga aataactcgg acaaatcctt gcctctataa caagattcaa
     1621 gattagtagc ttggcaacgt tgatatggat ggattcaaac atgcgttcac catataaaag
     1681 aatcacgttt aaattagtag tttattttat tttatttttt ttaccattta ttaaaataat
     1741 atgtatggta atgccattgt aagttgttta atttgtatga aaatttatta cctt
//
LOCUS       XR_011756978            1190 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839536), ncRNA.
ACCESSION   XR_011756978
VERSION     XR_011756978.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1190
                     /gene="LOC139839536"
                     /note="uncharacterized LOC139839536; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839536"
     ncRNA           1..1190
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839536"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839536"
ORIGIN      
        1 aaaattgaaa tttatttgat ctaggtggat tttagcttct gagtttggtg ggggctgttt
       61 atatggtggt tccaaaatct ccctgtgtcg ataaatccat ctgtttttga tgaagaggaa
      121 ggtttgcctt cacctgcttt ggaagattta gcattttttg aacccaccca caatgccatt
      181 agagctaaat tagttctttg atgacatgga tgatattgaa aatcctagaa aagtgatgaa
      241 ttcaataaga atggtaataa cgggagaaaa ctacccgttg agaagcgaaa cctaatgaag
      301 tgtaaacaac agaaactgtt aaatggacca aacatggtcc cgaaactagc tgtggtcaaa
      361 ccaagtaaac cttttctgac tcaaccccga gacacatgaa tccatatttg cacaagaagt
      421 tgcaaaacct tggaaaacct attcctccca aggggaccaa tgactcttca agcttgttac
      481 aagcagaagt ttatgtcttc aaatgaggaa agtgaagaag acaagcttga aggaacacaa
      541 aggaaacaca agaacgaaat caacaagcgg aaaaagattt gtgttaatga ttcttgatca
      601 attttacatt ttattttttt ttggtaaaag taataacttt tatctttggc agcgaaaaag
      661 tagagaacca tacaagttat ggagctgcat gatcttccaa tgcagagtgt tgcaccgaaa
      721 aatccggaag caaccataac agatgccagg ggcatgggcg gttctagctc ttggtcacaa
      781 ctaccatctg gtcggttttc atccatcgca taaatattga cagcgtatac tcgaataacc
      841 tgtcaaatca attacataat ttgatggcga tataatttta atctccgatg cttgattaaa
      901 tggcttatac ataattgata tggctattat ctcaatcgat atccctcacc tttggaatgg
      961 atgcctcttg acgcgacccc gagttcggaa ctcacttgtc aatcctagat gccttaaacg
     1021 caactaggaa ttccgattgt ctaagtgttt caccaagcct cccactgcgt gtgaaagaga
     1081 tgcctcgacg caactctgag ttcggaattg tcgagttgat tcgagatgcc ttgaagacaa
     1141 ctatgagttt cgaactttag ttgtttcaag aagcctcgtt ttgagacgat
//
LOCUS       XM_071829617            1503 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BTB/POZ and MATH
            domain-containing protein 3-like (LOC139839537), transcript variant
            X1, mRNA.
ACCESSION   XM_071829617
VERSION     XM_071829617.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1503
                     /gene="LOC139839537"
                     /note="BTB/POZ and MATH domain-containing protein 3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 36 Proteins"
                     /db_xref="GeneID:139839537"
     CDS             164..1387
                     /gene="LOC139839537"
                     /codon_start=1
                     /product="BTB/POZ and MATH domain-containing protein
                     3-like isoform X1"
                     /protein_id="XP_071685718.1"
                     /db_xref="GeneID:139839537"
                     /translation="MLTNNFDHGISSGSKSINESVNGSHDFTIRGYSLAKGMGAGKYI
                     SSDTFSVGGYDWAIYFYPDGKNLEDNSMYVSVFIALASDGTDVRALFELTLLDQSGKG
                     KHKVHSHFDRALESGPYTLKYRGSMWGYKRFFRRVSLETSDYLKDDCLSMHCTVGVVR
                     NRVEGPKHITISIPPSDMGQNLKYLLETETGCDIVFRVGGETFKAHKLILAARSPVFR
                     AQFFGLVGNPNMDEIELMDIEPSVFKGMLMFIYSDNLPDSQEVTGSMSMNTSINIIQH
                     MLAAADRFGLDRLKQLCEAKLCEEVTVDTVATTLSLADQHRCSQLKAICLKFAAANLG
                     VVMQTEGFKYVEETWPMLLSELLETIASSVAVDERSGEGLSRKRSGSSIIGLDFGSAA
                     AESADPNARRMRRRL"
     misc_feature    230..631
                     /gene="LOC139839537"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     Region: MATH; cd00121"
                     /db_xref="CDD:238068"
     misc_feature    order(392..394,542..550)
                     /gene="LOC139839537"
                     /note="putative substrate binding site [chemical binding];
                     other site"
                     /db_xref="CDD:238068"
     misc_feature    695..1057
                     /gene="LOC139839537"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in plant
                     BTB/POZ-MATH (BPM) protein family; Region:
                     BTB_POZ_BPM_plant; cd18280"
                     /db_xref="CDD:349589"
     misc_feature    1055..1240
                     /gene="LOC139839537"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     plant BTB/POZ-MATH (BPM) protein family; Region:
                     BACK_AtBPM-like; cd14736"
                     /db_xref="CDD:350516"
     polyA_site      1503
                     /gene="LOC139839537"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acttccgtcg tcctccgccg ccggccacca gactccgcct cttaattccc ccatctccgc
       61 ccccaatttc atccactcgt catcgaccac ctttccccct catcaattcc acaaaaaacc
      121 cccaaattcc ccatcaattc tgcatgctag ggttttaaaa aaaatgctaa ccaataattt
      181 cgatcacggg atctcatcag gctctaaatc gataaacgag tcggttaacg gctctcatga
      241 tttcacaatt agaggctatt cgttagctaa aggtatggga gctggtaaat atatatcaag
      301 tgatacgttt agcgttggtg gatacgattg ggcaatttat ttttatcccg atggtaagaa
      361 tttagaagat aattctatgt acgtttctgt gtttatagcg ttggctagtg atggtacgga
      421 tgttagggcg ttgtttgagc tgactttatt ggatcagagt ggaaaaggga aacataaagt
      481 tcatagtcat ttcgatcgtg cgttggagag cgggccgtat acgttaaaat accgaggaag
      541 catgtggggt tacaaacgtt tttttagaag ggtaagtttg gaaacatcag actatttgaa
      601 ggacgactgc ctttccatgc attgcaccgt tggagttgtc agaaatcgtg ttgagggacc
      661 caaacatatt accatttcta tacctccatc agatatgggt caaaatctca agtatttgtt
      721 agaaactgaa accggatgcg atatagtttt ccgtgttggg ggcgagactt tcaaggctca
      781 caaattgata cttgctgctc gctctcctgt atttagagca caattttttg gacttgttgg
      841 aaatcctaat atggacgaaa tagaattgat ggatatagaa ccctctgttt tcaagggtat
      901 gcttatgttt atctactcag ataaccttcc cgattcacaa gaggtaacgg ggtcaatgtc
      961 aatgaacaca tcgattaaca taattcaaca tatgttggct gctgctgatc ggtttggtct
     1021 agatcgactg aaacagttgt gtgaagccaa attgtgtgaa gaagttactg ttgatacagt
     1081 ggctacaact ctttctcttg ctgatcaaca ccgttgttct caacttaagg ctatatgtct
     1141 gaaatttgct gcggcaaact tgggagtggt tatgcaaaca gaagggttca aatatgtaga
     1201 ggagacatgg cctatgttac tttcagagct tctagaaacg attgcatcat cggtagccgt
     1261 ggatgaaaga tcaggtgaag ggttgagtag aaaaagaagc ggcagcagta ttattgggtt
     1321 agattttgga tcggcagcag cagaatctgc agaccctaat gccaggcgca tgcgtagacg
     1381 actgtaatct atattccttt ttccagttat agtctacttc ttatttgggt ttttctttcc
     1441 attggacaat gaattataag ctcactatta gtaattcatg actgataagc tttgcataac
     1501 atg
//
LOCUS       XM_071829618            1377 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BTB/POZ and MATH
            domain-containing protein 3-like (LOC139839537), transcript variant
            X2, mRNA.
ACCESSION   XM_071829618
VERSION     XM_071829618.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1377
                     /gene="LOC139839537"
                     /note="BTB/POZ and MATH domain-containing protein 3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839537"
     CDS             164..1261
                     /gene="LOC139839537"
                     /codon_start=1
                     /product="BTB/POZ and MATH domain-containing protein
                     3-like isoform X2"
                     /protein_id="XP_071685719.1"
                     /db_xref="GeneID:139839537"
                     /translation="MLTNNFDHGISSGSKSINESVNGSHDFTIRGYSLAKALASDGTD
                     VRALFELTLLDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFRRVSLETSDY
                     LKDDCLSMHCTVGVVRNRVEGPKHITISIPPSDMGQNLKYLLETETGCDIVFRVGGET
                     FKAHKLILAARSPVFRAQFFGLVGNPNMDEIELMDIEPSVFKGMLMFIYSDNLPDSQE
                     VTGSMSMNTSINIIQHMLAAADRFGLDRLKQLCEAKLCEEVTVDTVATTLSLADQHRC
                     SQLKAICLKFAAANLGVVMQTEGFKYVEETWPMLLSELLETIASSVAVDERSGEGLSR
                     KRSGSSIIGLDFGSAAAESADPNARRMRRRL"
     misc_feature    <281..505
                     /gene="LOC139839537"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     Region: MATH; cd00121"
                     /db_xref="CDD:238068"
     misc_feature    569..931
                     /gene="LOC139839537"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in plant
                     BTB/POZ-MATH (BPM) protein family; Region:
                     BTB_POZ_BPM_plant; cd18280"
                     /db_xref="CDD:349589"
     misc_feature    929..1114
                     /gene="LOC139839537"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     plant BTB/POZ-MATH (BPM) protein family; Region:
                     BACK_AtBPM-like; cd14736"
                     /db_xref="CDD:350516"
     polyA_site      1377
                     /gene="LOC139839537"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acttccgtcg tcctccgccg ccggccacca gactccgcct cttaattccc ccatctccgc
       61 ccccaatttc atccactcgt catcgaccac ctttccccct catcaattcc acaaaaaacc
      121 cccaaattcc ccatcaattc tgcatgctag ggttttaaaa aaaatgctaa ccaataattt
      181 cgatcacggg atctcatcag gctctaaatc gataaacgag tcggttaacg gctctcatga
      241 tttcacaatt agaggctatt cgttagctaa agcgttggct agtgatggta cggatgttag
      301 ggcgttgttt gagctgactt tattggatca gagtggaaaa gggaaacata aagttcatag
      361 tcatttcgat cgtgcgttgg agagcgggcc gtatacgtta aaataccgag gaagcatgtg
      421 gggttacaaa cgttttttta gaagggtaag tttggaaaca tcagactatt tgaaggacga
      481 ctgcctttcc atgcattgca ccgttggagt tgtcagaaat cgtgttgagg gacccaaaca
      541 tattaccatt tctatacctc catcagatat gggtcaaaat ctcaagtatt tgttagaaac
      601 tgaaaccgga tgcgatatag ttttccgtgt tgggggcgag actttcaagg ctcacaaatt
      661 gatacttgct gctcgctctc ctgtatttag agcacaattt tttggacttg ttggaaatcc
      721 taatatggac gaaatagaat tgatggatat agaaccctct gttttcaagg gtatgcttat
      781 gtttatctac tcagataacc ttcccgattc acaagaggta acggggtcaa tgtcaatgaa
      841 cacatcgatt aacataattc aacatatgtt ggctgctgct gatcggtttg gtctagatcg
      901 actgaaacag ttgtgtgaag ccaaattgtg tgaagaagtt actgttgata cagtggctac
      961 aactctttct cttgctgatc aacaccgttg ttctcaactt aaggctatat gtctgaaatt
     1021 tgctgcggca aacttgggag tggttatgca aacagaaggg ttcaaatatg tagaggagac
     1081 atggcctatg ttactttcag agcttctaga aacgattgca tcatcggtag ccgtggatga
     1141 aagatcaggt gaagggttga gtagaaaaag aagcggcagc agtattattg ggttagattt
     1201 tggatcggca gcagcagaat ctgcagaccc taatgccagg cgcatgcgta gacgactgta
     1261 atctatattc ctttttccag ttatagtcta cttcttattt gggtttttct ttccattgga
     1321 caatgaatta taagctcact attagtaatt catgactgat aagctttgca taacatg
//
LOCUS       XM_071829619            1343 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BTB/POZ and MATH
            domain-containing protein 3-like (LOC139839537), transcript variant
            X3, mRNA.
ACCESSION   XM_071829619
VERSION     XM_071829619.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1343
                     /gene="LOC139839537"
                     /note="BTB/POZ and MATH domain-containing protein 3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139839537"
     CDS             164..1183
                     /gene="LOC139839537"
                     /codon_start=1
                     /product="BTB/POZ and MATH domain-containing protein
                     3-like isoform X3"
                     /protein_id="XP_071685720.1"
                     /db_xref="GeneID:139839537"
                     /translation="MLTNNFDHGISSGSKSINESVNGSHDFTIRGYSLAKGMGAGKYI
                     SSDTFSVGGYDWAIYFYPDGKNLEDNSMYVSVFIALASDGTDVRALFELTLLDQSGKG
                     KHKVHSHFDRALESGPYTLKYRGSMWGYKRFFRRVSLETSDYLKDDCLSMHCTVGVVR
                     NRVEGPKHITISIPPSDMGQNLKYLLETETGCDIVFRVGGETFKAHKLILAARSPVFR
                     AQFFGLVGNPNMDEIELMDIEPSVFKGMLMFIYSDNLPDSQEVTGSMSMNTSINIIQH
                     MLAAADRFGLDRLKQLCEAKLCEEVTVDTVATTLSLADQHRCSQLKAICLKFAAANLG
                     GACCP"
     misc_feature    230..631
                     /gene="LOC139839537"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     Region: MATH; cd00121"
                     /db_xref="CDD:238068"
     misc_feature    order(392..394,542..550)
                     /gene="LOC139839537"
                     /note="putative substrate binding site [chemical binding];
                     other site"
                     /db_xref="CDD:238068"
     misc_feature    695..1057
                     /gene="LOC139839537"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in plant
                     BTB/POZ-MATH (BPM) protein family; Region:
                     BTB_POZ_BPM_plant; cd18280"
                     /db_xref="CDD:349589"
     misc_feature    1055..>1162
                     /gene="LOC139839537"
                     /note="BACK (BTB and C-terminal Kelch) domain; Region:
                     BACK; cl28903"
                     /db_xref="CDD:475122"
ORIGIN      
        1 acttccgtcg tcctccgccg ccggccacca gactccgcct cttaattccc ccatctccgc
       61 ccccaatttc atccactcgt catcgaccac ctttccccct catcaattcc acaaaaaacc
      121 cccaaattcc ccatcaattc tgcatgctag ggttttaaaa aaaatgctaa ccaataattt
      181 cgatcacggg atctcatcag gctctaaatc gataaacgag tcggttaacg gctctcatga
      241 tttcacaatt agaggctatt cgttagctaa aggtatggga gctggtaaat atatatcaag
      301 tgatacgttt agcgttggtg gatacgattg ggcaatttat ttttatcccg atggtaagaa
      361 tttagaagat aattctatgt acgtttctgt gtttatagcg ttggctagtg atggtacgga
      421 tgttagggcg ttgtttgagc tgactttatt ggatcagagt ggaaaaggga aacataaagt
      481 tcatagtcat ttcgatcgtg cgttggagag cgggccgtat acgttaaaat accgaggaag
      541 catgtggggt tacaaacgtt tttttagaag ggtaagtttg gaaacatcag actatttgaa
      601 ggacgactgc ctttccatgc attgcaccgt tggagttgtc agaaatcgtg ttgagggacc
      661 caaacatatt accatttcta tacctccatc agatatgggt caaaatctca agtatttgtt
      721 agaaactgaa accggatgcg atatagtttt ccgtgttggg ggcgagactt tcaaggctca
      781 caaattgata cttgctgctc gctctcctgt atttagagca caattttttg gacttgttgg
      841 aaatcctaat atggacgaaa tagaattgat ggatatagaa ccctctgttt tcaagggtat
      901 gcttatgttt atctactcag ataaccttcc cgattcacaa gaggtaacgg ggtcaatgtc
      961 aatgaacaca tcgattaaca taattcaaca tatgttggct gctgctgatc ggtttggtct
     1021 agatcgactg aaacagttgt gtgaagccaa attgtgtgaa gaagttactg ttgatacagt
     1081 ggctacaact ctttctcttg ctgatcaaca ccgttgttct caacttaagg ctatatgtct
     1141 gaaatttgct gcggcaaact tgggaggtgc gtgttgtcca tagaatctga gcggtgcatt
     1201 gttcagtggt tatgcaaaca gaagggttca aatatgtaga ggagacatgg cctatgttac
     1261 tttcagagct tctagaaacg attgcatcat cggtagccgt ggatgaaaga tcaggtgaag
     1321 ggttgagtag aaaaagaagc ggc
//
LOCUS       XM_071829620            2150 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein HESO1
            (LOC139839539), mRNA.
ACCESSION   XM_071829620
VERSION     XM_071829620.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2150
                     /gene="LOC139839539"
                     /note="protein HESO1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139839539"
     CDS             402..1955
                     /gene="LOC139839539"
                     /codon_start=1
                     /product="protein HESO1"
                     /protein_id="XP_071685721.1"
                     /db_xref="GeneID:139839539"
                     /translation="MNSHNSLEIILRDILQVVNPTHDDWTKRFQVISDLRAVIDTLDI
                     LRDATLEPFGSFVSNLFTRWGDLDISIELPNGSYISSAGKKHKQTLLLDVLKALKRKG
                     GFHGIKYISHARVPILKCDSNKENISCDISINNLSGQMKSKLLFWINDIDRRFRDMVL
                     IVKEWAKAHDINDSKTGTLNSYSLSLLIVFHFQTCEPAILPPLSEIYPGNMAADLKGV
                     RAVAEKNIEEICSANIKRIKLERSRNINGSSLADLFISFLAKFSDISLRAATQGISPH
                     NGQWEDIDTNMIWQPKTYALFIEDPFEQPMNCARAIGQRNLNKIANAFRSSHQKLTSP
                     NQNYPLAVLVRPEVLSIMSRSQVLSSGGPSVNPIRTNPHVHINPNGNVRGSSGAHLQS
                     YGNTSNSYNQNQHRNGGSQVFNGAHTPTQVQHRNMQVNSTYNRVNQMHFQGSQSQIEP
                     SQSVVVNQRPPNKVTIRPPDNVVNQRPSNKVTIRPPDNGANQRPANNGVNQRPGPSSQ
                     NQQRWIPRS"
     misc_feature    426..>1400
                     /gene="LOC139839539"
                     /note="DNA polymerase sigma [Replication, recombination
                     and repair]; Region: TRF4; COG5260"
                     /db_xref="CDD:227585"
     polyA_site      2150
                     /gene="LOC139839539"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacaaatctg ggcagcccat aacctaaaaa ggaggttcat gtgatatgct gctgtaaacc
       61 actttcgagg caccttcctc cttttctgtc tctgttattt gccgcgttca tcatcaatga
      121 tttattaaag atgcataaac tgtaaatgtt tatgcaattg cccctcacat tcatattcat
      181 ataaatacaa ttccgccgca aacaaaaccc tcaaaatcac caatttatct gaaatcaaac
      241 caccccatat gtcttctttt aatctcaaca tgtttaataa ccatcttaac ggataatgtt
      301 caccctttca ataatcatgt actttcaaat cttgagctct ccgtcagtcc tgtattatta
      361 atgtcatatt agccagattc tgtgtttttt ggggatcgaa gatgaattcc cataattcgt
      421 tggaaattat cctcagggat attcttcaag tggtaaatcc cactcatgat gattggacaa
      481 aacgatttca agttattagt gatcttcgag ctgttattga tactttagac atacttagag
      541 atgcgacatt ggagccgttt ggttcctttg tgtcgaacct ctttacgaga tggggggatt
      601 tagatatatc gatcgagtta cccaatggtt cgtatatttc ttctgctggg aaaaagcaca
      661 agcaaacttt actattagac gttttaaaag ctctcaaaag aaaaggtgga ttccatggaa
      721 ttaagtatat atcccatgcg agagtgccga ttttaaaatg tgatagtaac aaggaaaata
      781 tctcttgtga catctctatc aacaatttga gcggtcaaat gaagtcaaaa ttgttgtttt
      841 ggataaatga catcgacaga cgttttcgtg acatggtttt aattgtgaaa gaatgggcaa
      901 aggcacatga tatcaatgac tccaaaactg gaaccttaaa ttcttattcc cttagcttgc
      961 tcattgtatt ccattttcag acttgtgaac ctgctatact accccctctt agcgaaatct
     1021 atcctggtaa tatggctgct gaccttaaag gtgtaagagc tgttgcagag aaaaatattg
     1081 aagagatttg tagtgcgaat attaaaagga tcaaattaga aagatcgaga aatattaatg
     1141 gaagctcttt ggctgatctc ttcatatctt ttcttgcaaa atttagtgac atcagcttaa
     1201 gggccgcaac acaagggatt agtccacata atggacaatg ggaagacatt gatactaaca
     1261 tgatctggca gcctaaaact tatgccttat ttattgaaga cccatttgaa caaccaatga
     1321 attgtgcaag ggccattggg caacgaaacc tcaacaagat tgcaaatgcg tttcgtagta
     1381 gccatcagaa gttaacttca cccaaccaaa actacccgct cgctgttctt gtaaggcccg
     1441 aagttttgag catcatgtct agatctcaag ttctaagttc aggtgggccc agcgttaatc
     1501 ctataagaac taatccacat gttcacataa accctaacgg taatgttagg ggatctagtg
     1561 gggcccattt gcagtcatac gggaatacta gtaacagtta taatcagaac cagcatagga
     1621 atggtgggtc acaagttttt aacggtgcac acacacccac acaagtacaa caccggaata
     1681 tgcaggtaaa cagtacgtac aacagggtca atcagatgca ttttcaagga agtcaaagtc
     1741 aaattgagcc gtctcagagt gttgtggtga accagagacc cccaaacaag gtgaccatta
     1801 gacccccgga caatgtggtg aaccagagac cctcaaacaa agtgaccatt agacccccag
     1861 acaatggcgc gaaccagaga ccggcgaaca atggtgtgaa ccaaagacct ggaccgtctt
     1921 ctcaaaatca gcagagatgg attccaagat cttagaaatg agtataccat tggtttgtgt
     1981 tttaaataca taaccatgtt cttatttttg taagtggatg ttttggttat accctctgaa
     2041 aagactatat gtaatggttt atgtgacttg accaacccat gttgatttta aatttttgat
     2101 acctgatctg taaaattggg ttatctacaa tttgtatgaa ttttgatcta
//
LOCUS       XM_071829621             879 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thylakoid lumenal 15 kDa
            protein 1, chloroplastic (LOC139839540), transcript variant X1,
            mRNA.
ACCESSION   XM_071829621
VERSION     XM_071829621.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..879
                     /gene="LOC139839540"
                     /note="thylakoid lumenal 15 kDa protein 1, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139839540"
     CDS             57..719
                     /gene="LOC139839540"
                     /codon_start=1
                     /product="thylakoid lumenal 15 kDa protein 1,
                     chloroplastic isoform X1"
                     /protein_id="XP_071685722.1"
                     /db_xref="GeneID:139839540"
                     /translation="MAVLNFTLLCHSKPHSSLPLFKSSPIIQFPISSQDQTKVKIKFT
                     DDSSISFGESISKACITALISASIAFTVDPALAFKGGGPYGSEVTRGQDLTGKDFSGK
                     TLIKQDFKTSILRQTNFKNAKLLGASFFDADLTGADLSDADLRGADFSLAQVTKANLT
                     NANLEGALVTGNTSFKGSIITGADFTDVPLREDQKEYLCKIADGVNPTTGNETRETLF
                     CK"
     misc_feature    324..>632
                     /gene="LOC139839540"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; Region: YjbI;
                     COG1357"
                     /db_xref="CDD:440968"
     polyA_site      879
                     /gene="LOC139839540"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatgtatatc cacatgatga tgatgatata atatcaccca caaacttgag ttaacaatgg
       61 cggttctcaa cttcaccttg ttgtgtcact ccaaacccca ttcttctctt ccccttttca
      121 aatcatcccc aattatccaa ttccccattt cttcacagga tcaaaccaaa gtcaaaatca
      181 aattcacaga tgattcgtca atcagttttg gggaatctat atctaaagca tgtatcacag
      241 ctctaatttc agcttccatc gccttcaccg ttgatcctgc ccttgcattt aagggaggag
      301 gaccgtatgg ttctgaagtt acgagagggc aagatcttac tggaaaagat tttagcggca
      361 agactttgat caagcaagat tttaaaacgt caattttgag acaaactaat tttaagaacg
      421 caaagttact tggagctagt ttctttgatg ctgatttaac aggagctgat ctatccgatg
      481 ctgatcttag aggcgcagac ttctccttag cacaagtaac aaaggcaaat ttgactaatg
      541 ctaacttgga aggagcactt gttacaggga atacatcttt caaaggatca atcataacag
      601 gcgcagattt cacggatgtc cctttaagag aagatcaaaa ggaatacctt tgtaaaattg
      661 ctgatggggt gaatccgaca acaggcaatg aaacacgaga aacgttgttt tgcaagtagg
      721 gcgagccgtg agctcctgtg gcatcatttc gtaggaattc atgttgcgaa tctctaaaag
      781 ctgtatcatt tttttctgaa aagttccatc gtttgttggc taatcacgga tcgtcttgtg
      841 tcgctattga aaatgaagtc tatattcttt ctggttctt
//
LOCUS       XM_071829622             782 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thylakoid lumenal 15 kDa
            protein 1, chloroplastic (LOC139839540), transcript variant X2,
            mRNA.
ACCESSION   XM_071829622
VERSION     XM_071829622.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..782
                     /gene="LOC139839540"
                     /note="thylakoid lumenal 15 kDa protein 1, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839540"
     CDS             56..622
                     /gene="LOC139839540"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685723.1"
                     /db_xref="GeneID:139839540"
                     /translation="MAVLNFTLLCHSKPHSSLPLFKSSPIIQFPISSQDQTKVKIKFT
                     DDSSISFGESISKACITALISASIAFTVDPALAFKSILRQTNFKNAKLLGASFFDADL
                     TGADLSDADLRGADFSLAQVTKANLTNANLEGALVTGNTSFKGSIITGADFTDVPLRE
                     DQKEYLCKIADGVNPTTGNETRETLFCK"
     misc_feature    <290..529
                     /gene="LOC139839540"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; Region: YjbI;
                     COG1357"
                     /db_xref="CDD:440968"
     polyA_site      782
                     /gene="LOC139839540"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgtatatcc acatgatgat gatgatataa tatcacccac aaacttgagt taacaatggc
       61 ggttctcaac ttcaccttgt tgtgtcactc caaaccccat tcttctcttc cccttttcaa
      121 atcatcccca attatccaat tccccatttc ttcacaggat caaaccaaag tcaaaatcaa
      181 attcacagat gattcgtcaa tcagttttgg ggaatctata tctaaagcat gtatcacagc
      241 tctaatttca gcttccatcg ccttcaccgt tgatcctgcc cttgcattta agtcaatttt
      301 gagacaaact aattttaaga acgcaaagtt acttggagct agtttctttg atgctgattt
      361 aacaggagct gatctatccg atgctgatct tagaggcgca gacttctcct tagcacaagt
      421 aacaaaggca aatttgacta atgctaactt ggaaggagca cttgttacag ggaatacatc
      481 tttcaaagga tcaatcataa caggcgcaga tttcacggat gtccctttaa gagaagatca
      541 aaaggaatac ctttgtaaaa ttgctgatgg ggtgaatccg acaacaggca atgaaacacg
      601 agaaacgttg ttttgcaagt agggcgagcc gtgagctcct gtggcatcat ttcgtaggaa
      661 ttcatgttgc gaatctctaa aagctgtatc atttttttct gaaaagttcc atcgtttgtt
      721 ggctaatcac ggatcgtctt gtgtcgctat tgaaaatgaa gtctatattc tttctggttc
      781 tt
//
LOCUS       XM_071829624            3367 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pumilio homolog 1-like
            (LOC139839541), mRNA.
ACCESSION   XM_071829624
VERSION     XM_071829624.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3367
                     /gene="LOC139839541"
                     /note="pumilio homolog 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 36
                     Proteins"
                     /db_xref="GeneID:139839541"
     CDS             413..2959
                     /gene="LOC139839541"
                     /codon_start=1
                     /product="pumilio homolog 1-like"
                     /protein_id="XP_071685725.1"
                     /db_xref="GeneID:139839541"
                     /translation="MITDSYSKMMSDMGMRSLVSNNDELTLLMREKHRQQLSGSSSSS
                     DREMELNMYRSGSAPPTVEGSLNAVAGLAAEFGGISEDELRADPGYISYYYANVNLNP
                     RLPPPLLSKEDWRFSQRGNGIGNNAIGDRRKVNGNDSRVEWAGNGLIGLGLGSRQKSI
                     AEILQDDISQTASGSRHSSRPASRNTFDENVDLSESHFAHLHQNMASMDPLRSSPNHQ
                     VMSSGSHTYASALGASLSRSTTPDPQLVGRTASPRVNGPSDLISGLSGLTLSGNGMTD
                     GIQNTSHLRNGSYQYVGNGSPVNSYMKGPTNGAGGSPSQYQNIDSPGSSLYNGYMMNP
                     ASPTMMGGLNLPPLFDNGAGFGLGSSRAGNHSPTGHQGPLMDPLYLQNLSEYAAALND
                     ATIDRELVTLQKAYLAGLLSPQKSQYGVNHGYYGNSGYGLGVGYPGSPLGCGLLPNSA
                     FGSCSPVRHGDRSLRFPSGIRNLVGVESFASSLLDEFKSNKARCFELSEIAGHVVEFS
                     ADQYGSRFIQQKLETATTEEKDMVFDEIMPQAFTLMTDVFGNYVIQKFFEHGNATQIR
                     ELAEQLNGHVLTLSLQMYGCRVIQKAFEVVDLDQQTKMVAELDGHVMRCVRDQNGNHV
                     IQKCIECVPEDAIHFIISTFYDQVVTLSTHPYGCRVVQRVLEHCHDPKTQSIVMDEIL
                     KSIIMLAQDQYGNYVVQHVLEHGKPHERTTIIDQLTGQIVQMSQQKFASNVVEKCLTF
                     GTPEERRTLVTEMLGTTDENEPLQVMMKDQFANYVVQKVLETCDDHQLEMILNRIKVH
                     LNALKKYTYGKHIVARVEKLVAAGERRIGAMGGYAAAAAASAAAAANATT"
     misc_feature    917..2875
                     /gene="LOC139839541"
                     /note="RNA-binding protein of the Puf family,
                     translational repressor [Translation, ribosomal structure
                     and biogenesis]; Region: COG5099"
                     /db_xref="CDD:227430"
     misc_feature    1895..2857
                     /gene="LOC139839541"
                     /note="Pumilio-family RNA binding domain; Region: Pumilio;
                     cd07920"
                     /db_xref="CDD:153420"
     misc_feature    order(2060..2065,2072..2074,2168..2173,2180..2182,
                     2279..2281,2288..2290,2384..2389,2396..2398,2486..2491,
                     2495..2500,2507..2509,2594..2599,2603..2608,2615..2617,
                     2720..2725,2729..2734,2741..2743,2831..2833,2840..2842)
                     /gene="LOC139839541"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:153420"
     polyA_site      3367
                     /gene="LOC139839541"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtaaaattta agacaaaacc ctaggttcca ctgtatgaac aaatcccgca acaaaatctg
       61 atctgtgccg tcacccaact taatccaacg gtccacatca tcccctgctt atcactccct
      121 tcatttagct cctcactctc ttctcacaaa cccttgcaaa aatcgatctt tacacataca
      181 cagcgagatt aaaatgtcca aaatcaatca tctaccatca accaattaaa caagcttttc
      241 aatttgaatc aaatcatctc aaaatctgca attaaattga cacaccaacg aaaaagtttc
      301 agtctttatc atgaaatcaa gttaatctcg agcttataaa gattgcacct ttcttaaatt
      361 tagttacacc caagtgaaat ttttagtttt ttacaaaaac ccaaatactg ggatgattac
      421 tgatagttat tcaaagatga tgtctgatat gggtatgcga tcattggttt caaataacga
      481 tgaattaacg ttgttaatga gggaaaaaca taggcaacaa ttgtctggta gttctagtag
      541 tagtgatcgt gaaatggagc ttaatatgta cagaagtggg tcggccccac caacagtgga
      601 aggatcatta aatgctgttg ctggattagc agcagaattt gggggtattt cagaagatga
      661 gttaagggct gatccagggt atatttctta ttattatgct aatgttaatc taaaccctag
      721 gttaccaccg ccattgttgt cgaaagagga ttggcgattt tcgcaacgtg gtaatgggat
      781 tggaaataat gctattggtg ataggaggaa agtcaatggg aatgatagta gggttgaatg
      841 ggccggaaat gggctaattg ggttgggttt agggagcagg cagaagagca ttgctgagat
      901 ccttcaggat gatattagtc aaaccgcttc tggctctagg cattcatctc gtccagctag
      961 ccgtaacaca ttcgatgaaa atgttgacct gtccgaatca cattttgctc atcttcatca
     1021 aaatatggct tcaatggacc cacttcggtc cagcccaaat catcaggtga tgtcatctgg
     1081 ttcacacacc tacgcttcgg ctcttggtgc atctttatct agaagcacca ctcctgaccc
     1141 gcagcttgtg ggtcgtactg ctagcccacg ggttaacggg ccatccgatc tgatatccgg
     1201 tttatccggg ttgactcttt ccggtaacgg tatgacggat ggaatccaaa acacttccca
     1261 tttgcgcaac gggtcgtatc agtatgtggg caacgggtcg cctgttaatt cgtatatgaa
     1321 agggcccacc aacggtgctg gcggttcacc atctcaatat cagaatattg acagtccagg
     1381 ttcatcttta tataatggtt atatgatgaa ccctgcatca ccaaccatga tgggtgggtt
     1441 aaatttgcca cctttatttg acaacggtgc tgggtttggt ttagggtcta gtagagctgg
     1501 aaatcacagc ccaacgggtc atcagggccc actaatggac ccgttgtatc ttcaaaactt
     1561 gagtgaatat gctgctgctt tgaatgatgc aactattgat agggaactag tgacgcttca
     1621 gaaagcttac ctggctggtt tgttatctcc tcaaaagagt caatacggtg ttaaccatgg
     1681 ttactatggt aactctggtt atgggcttgg tgttgggtat cctggaagcc cattgggctg
     1741 tggtcttctg cctaattcgg cttttgggtc atgcagtcca gttagacatg gtgatcgcag
     1801 tttgcggttt ccttctggga ttcgtaattt agttggagtt gaaagttttg catcctcgtt
     1861 gctcgatgag ttcaagagca ataaagccag gtgctttgag ctgtctgaaa ttgcgggcca
     1921 cgtcgttgaa ttcagtgcgg atcaatacgg aagtcgtttt attcaacaga aacttgagac
     1981 cgcaacaacc gaagagaaag acatggtgtt cgatgaaatt atgccacaag cttttacact
     2041 tatgactgat gtgttcggta attatgtcat ccagaagttt tttgaacatg gaaatgctac
     2101 acaaattaga gaactagctg aacagctaaa cggacatgtt cttacactta gtcttcagat
     2161 gtatggttgc cgagttatcc aaaaggcgtt tgaggttgtt gaccttgacc aacaaacaaa
     2221 aatggttgcg gagcttgatg gtcacgtgat gcgttgtgta cgtgatcaaa atgggaatca
     2281 tgttattcaa aagtgtattg agtgtgtacc ggaagatgct attcatttta tcatttctac
     2341 tttttatgat caagttgtaa ctttgtcaac ccatccctat ggttgtcgtg tcgtacagag
     2401 ggttttggag cactgtcatg acccgaaaac gcaaagcatt gtgatggacg aaatcttgaa
     2461 atctattatc atgttggcgc aagaccaata tggaaattat gttgttcagc acgtgctaga
     2521 acatggaaag ccacatgagc gtactacgat tatagaccag ttaaccgggc agatagttca
     2581 aatgagtcaa caaaagtttg cctcgaatgt tgtcgaaaag tgtttgactt ttggtacccc
     2641 agaggaacgt cggacccttg tgaccgaaat gttaggcacc actgatgaaa atgaaccact
     2701 tcaggtaatg atgaaggatc agtttgctaa ttacgttgtg cagaaagttt tggagacgtg
     2761 tgatgaccac caacttgaaa tgatccttaa tcgtatcaag gttcatctga atgctcttaa
     2821 gaaatatact tatgggaaac atatagttgc tcgtgtcgag aaacttgttg ctgctggaga
     2881 aaggaggatt ggggcaatgg gtggatacgc tgccgctgcg gcggcgtctg cagcagctgc
     2941 tgctaatgct actacttaat gtaatgggat caagagagtt gtacagctaa ccgagtgtcg
     3001 ataatgaatg gtatgtgttt gttggttcgt tttaacatcc agccagctaa gtctgttttg
     3061 caaataaaag ggtttgtagc tatgaaacat gtacattgtt agatattata taatatataa
     3121 tatacctagg actcgagtct tttagccaag gctcagaggg tgaaacacac cacccgaggc
     3181 cgcccccgtt gctgagatta aacccaagtt agcgttttgt gtatgttatg atgatgagtg
     3241 acgtgaccgt acaaatatat agccgggtgc agcagagcct tatggtttat taggttttac
     3301 tggaatttca ttttcttgtg catggatttt tttatcatta tgttttatct agtgaaactt
     3361 tgtttta
//
LOCUS       XM_071829625            1721 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rhodanese-like
            domain-containing protein 4, chloroplastic (LOC139839542), mRNA.
ACCESSION   XM_071829625
VERSION     XM_071829625.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1721
                     /gene="LOC139839542"
                     /note="rhodanese-like domain-containing protein 4,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139839542"
     CDS             134..1483
                     /gene="LOC139839542"
                     /codon_start=1
                     /product="rhodanese-like domain-containing protein 4,
                     chloroplastic"
                     /protein_id="XP_071685726.1"
                     /db_xref="GeneID:139839542"
                     /translation="MEAMNAAVILKPISVLKPEPTKKHSTLSPTTFPQLKISKPKFNG
                     TSLVLLSSSFFNYAYSKALTYEEALNQSTTSDSSSFSTPDIDVSGVIDGIINFSVENP
                     VVVAGGAALLAVPFILSQVFGKSSKPWGVESAKIAYEKLGDDINAQLLDIRPSSEIRL
                     MGSPDIKGFKKKSIAVAYNGDDKQGFLKKLALKFKDPENTTLFVLDKFDGSSELVAEL
                     VTVNGFKAAYAIKDGADGSRGWMNSGLPWVLPKKSLAFDFSSLTDAIDGLFGDSSDAV
                     SVIFSVAAATGLGLLAFTEVETILEVLGSAAIVQLVTKKLLFAEDRKKTIQEFNEFVA
                     TNIGPKELLEEIKDIGKALLPPVTSKTLPAPTTTTEEAVVEPTNSAPPEIQAEPATPP
                     PEIQAAAPSPVEPPVQVNAVPKTEVKEEAVPKPTRSLSPYPYYPNLKPPTSPTPSRP"
     misc_feature    542..874
                     /gene="LOC139839542"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; Region: RHOD;
                     cl00125"
                     /db_xref="CDD:444705"
     misc_feature    749..751
                     /gene="LOC139839542"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     misc_feature    <911..>1426
                     /gene="LOC139839542"
                     /note="DNA polymerase III subunit gamma/tau; Region:
                     PRK12323; cl46901"
                     /db_xref="CDD:481241"
     misc_feature    <1190..>1411
                     /gene="LOC139839542"
                     /note="cell division protein DedD; Provisional; Region:
                     PRK11633"
                     /db_xref="CDD:236940"
     polyA_site      1721
                     /gene="LOC139839542"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtccagaaca attcagaaat cataagaaac aagtattacc tatccttctc cttctctgct
       61 gctttcatca ttaatttttt tctcaaattt ttattataat ttatttattt ataaaaagaa
      121 gtagaattat gcaatggaag ccatgaatgc agcagttata ctgaaaccca tttcagttct
      181 taaaccagaa cccaccaaaa agcactcaac tttatcacct acaacattcc ctcaactcaa
      241 aatctcaaaa cccaaattca atggcactag tttagtcctg ttatcatcat cttttttcaa
      301 ttatgcttat tcaaaagcac ttacttatga agaagcactt aatcaatcaa caacatctga
      361 ctcatcttca ttctcaacac ctgatattga tgttagtggt gttattgatg gtataatcaa
      421 ctttagtgtt gagaatccag ttgtggtagc tggtggggcc gccttgttgg cagttccatt
      481 tattctgtct caagtttttg gaaaaagtag taaaccatgg ggtgttgagt ctgcaaaaat
      541 tgcttatgag aaattgggtg atgatataaa tgctcaattg cttgatatca ggcctagttc
      601 tgaaataagg ttaatgggta gtccagatat taagggattt aaaaagaagt caattgcagt
      661 tgcttataat ggtgatgata aacaaggttt cttaaagaag ctggctttga agtttaagga
      721 tccagagaat accacattgt ttgttttgga taaattcgat ggtagctctg aacttgttgc
      781 agagttggtc acagtaaatg ggttcaaagc tgcttacgct ataaaagacg gtgcagacgg
      841 atcccgtgga tggatgaaca gtggacttcc atgggtatta ccaaaaaagt cgttagcttt
      901 cgactttagc agtttgactg atgcaattga tggcttgttt ggtgatagtt ctgatgcggt
      961 atctgtaatt tttagcgtag ctgcagctac tggacttggt ttattagcat ttaccgaggt
     1021 tgaaacaata cttgaggtct tgggttctgc agcaatagtt caacttgtca ccaagaagct
     1081 actatttgca gaggatcgta aaaaaactat ccaagaattt aacgaattcg ttgccacaaa
     1141 tattggaccc aaagagcttc tagaggagat caaagacatt gggaaagcac ttttaccacc
     1201 tgtgactagc aaaacacttc ctgcaccgac aactaccacc gaagaagctg tggtggagcc
     1261 cactaattcc gccccacctg agatacaagc agaacctgca acgccaccac ctgagataca
     1321 agcggcagca ccttcaccag tagagcctcc tgtacaagtc aacgcggtcc cgaaaacaga
     1381 agtcaaagaa gaagcagttc cgaaaccaac acgctcgctt tcgccgtacc catattatcc
     1441 taatcttaag cctccaacat ctcctactcc ttcaagacca tagttttatg ccgcaattag
     1501 atattcaaat ttttcaagca tcgatcttta aaggaacagg tgttcacctg gtaattccag
     1561 aggtctgatt acaagcgttg agccattaat ggtgttcatt gtagctacat gtttttatcg
     1621 agttttgtgt ttgtgaaatt gttgatggtt gagtagaata ttgatactca ttgtatttgc
     1681 gtgtttggaa ataatcagta caaatgcttt tatggtctca a
//
LOCUS       XM_071829626            1514 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839543), mRNA.
ACCESSION   XM_071829626
VERSION     XM_071829626.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1514
                     /gene="LOC139839543"
                     /note="uncharacterized LOC139839543; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139839543"
     CDS             57..1400
                     /gene="LOC139839543"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685727.1"
                     /db_xref="GeneID:139839543"
                     /translation="MSKKRGRRSPTDDRRSNGDYSSSSRNVDVHPKNKARSSSSIVVI
                     SFVVISIIIFPIAISVYLRYLKQQDDFNTSELQHSWLPYVYKRGLVTTDISYQQILTE
                     NDRVSENASIRQFTYPVLAYVTPWNSKGYELAKDFNSKVTHISPVWYDLKSQGADFVL
                     EGRHNVDKGWISDLRMKGHALILPRIVLEAIPMDLLKKKKQRSKVIDLIVAECKEMDF
                     DGIVLESWSRWAAYGVLNDPHMRNLALQFIKKLGQTMHSVLVNQEDNKQSLQLVYVIG
                     PPRSDRLQAYDFGPEDLQNLGDSVDGYSLMTYDFSNPQSPGPNAPLKWVHSTMQLLCG
                     THTDGSRNSSQKIFLGINFYGNDYVLQGGVGGGAILGRDYVSLLEKHKPQLQWDKKSA
                     EHYFVYTDENQHVKHVVFYPSLLSIAMRLDEARSWGAGISIWEIGQGLDYFFGLL"
     misc_feature    399..1397
                     /gene="LOC139839543"
                     /note="Stabilin-1 interacting chitinase-like protein
                     (SI-CLP) is a eukaryotic chitinase-like protein of unknown
                     function that interacts with the endocytic/sorting
                     transmembrane receptor stabilin-1 and is secreted from the
                     lysosome. SI-CLP has a glycosyl...; Region: GH18_SI-CLP;
                     cd02876"
                     /db_xref="CDD:119355"
     misc_feature    order(420..422,498..500,720..722,726..728,732..734,
                     978..983,1356..1358)
                     /gene="LOC139839543"
                     /note="putative carbohydrate binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:119355"
ORIGIN      
        1 aaagaagggg gttttgttag cttgtaataa tatgatcgaa agaaaaacga acggcgatgt
       61 cgaaaaaacg aggacggcga tcaccgacgg atgatcgccg atcaaatggt gactactctt
      121 cttcaagtcg caatgttgat gttcatccaa aaaacaaagc acgtagtagt agcagtatcg
      181 ttgttatcag ttttgtagtt atctcaatca tcatctttcc aattgcaatt tctgtatatc
      241 ttcgatatct aaaacaacaa gatgatttca atacgtcgga actacaacac tcatggcttc
      301 cgtacgtata taaacgaggc cttgtgacga ctgacatcag ttatcaacaa attctcactg
      361 aaaatgatag agtttcagag aatgcatcga ttcgacaatt tacctaccct gtgcttgctt
      421 atgttacacc atggaattca aagggatatg aactggcaaa ggacttcaac tctaaggtta
      481 ctcatatatc acccgtttgg tatgatttaa aaagccaagg ggctgatttt gttctggaag
      541 gaagacataa tgttgataaa ggatggattt cagatctcag aatgaaggga catgctctga
      601 tattgcctag aattgtactc gaagctatac ctatggattt gcttaagaag aagaagcaaa
      661 gatctaaggt aattgacctt atagtagctg aatgcaagga aatggatttt gatggcattg
      721 tactagaatc ttggtcaaga tgggctgcat atggtgtctt gaacgaccca cacatgcgga
      781 atctggctct gcagttcatt aagaagttag gacaaaccat gcattctgtg ctagtaaatc
      841 aagaggacaa caagcagagt ctgcagttag tatatgttat tggtccacca cgttctgata
      901 gacttcaggc ttatgatttt gggcccgaag atctgcaaaa tttgggtgat tctgtggatg
      961 gttactccct tatgacttat gacttctcaa atcctcaaag tccgggtccg aatgcaccac
     1021 ttaagtgggt ccactctact atgcagctgc tctgtgggac ccacaccgat ggctctcgga
     1081 actcgtctca aaaaatattt ctaggcatca acttttatgg aaatgattat gttcttcaag
     1141 gaggcgttgg tggaggggct attcttggaa gagattatgt ttcattgttg gaaaagcata
     1201 agcctcaact gcaatgggat aaaaaaagtg cagagcatta ctttgtgtac acggatgaaa
     1261 atcaacatgt gaagcatgtc gtgttctacc cttctctttt gtctattgca atgcggttgg
     1321 atgaagctcg gtcatggggt gccggcattt ccatttggga aatcggtcaa ggtttagatt
     1381 acttctttgg ccttctgtaa ctcggatgta tgtactttga agtataggat aatcatcttg
     1441 ttaaatttca ttgtgtttag gatcttttat ttaaattaat ttataattat caggaaatct
     1501 gaaaattttg gaat
//
LOCUS       XR_011756979             284 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839544), ncRNA.
ACCESSION   XR_011756979
VERSION     XR_011756979.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..284
                     /gene="LOC139839544"
                     /note="uncharacterized LOC139839544; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839544"
     ncRNA           1..284
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839544"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839544"
ORIGIN      
        1 tagaactctt caaccgtggc tcatagtctt atgtcgagac tagatttgaa cgccatgaga
       61 tcacaagagt gttttgcaac ctcaatgagg attggcgcga tcaacacttg ggatcgatac
      121 gggaccatcc tgttgaacgc ggtggcttag tacacaagta aagttattgc ttcggaaaaa
      181 ctcaagacta ttaagagaag aaacttgata aattggcaaa ggttttgacg ttaatcactc
      241 ggacgagaac gatggataaa atgtttgatg tattgtttgc aggt
//
LOCUS       XM_071829627            1770 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides jasmonoyl--L-amino acid
            synthetase JAR4-like (LOC139839545), mRNA.
ACCESSION   XM_071829627
VERSION     XM_071829627.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1770
                     /gene="LOC139839545"
                     /note="jasmonoyl--L-amino acid synthetase JAR4-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 16 Proteins"
                     /db_xref="GeneID:139839545"
     CDS             1..1770
                     /gene="LOC139839545"
                     /codon_start=1
                     /product="jasmonoyl--L-amino acid synthetase JAR4-like"
                     /protein_id="XP_071685728.1"
                     /db_xref="GeneID:139839545"
                     /translation="MEKEFNSEEVIQEFEALTKDAKRIHIETLKQILKENSEAEYLKN
                     LNVDATTDLETYTSRVPLVTHKDLEPYIQKIADGAPYPVLTRKPITNFSLSSGTAQGK
                     RKFVPYNEKVTEFTMQVLQTSFAFRNRVFPIAKNGKALNFLYSSKQFTTKGGVIAATA
                     STNVCRSPEFKKTMKALQTPACSPDEVVFGPDYHQSLYCHLLCGLIFHEEIQVISSSF
                     AHSIVHSFRTFEQVWEELCNDLRTGVLSPRITVPSIRTAMANILKPNPELADKIHKKC
                     SGLIDWHGLIPEIFPNTKYIYGIMTGSMEPYLVKLRHYARDIPLQSGDYGSSEGWIGV
                     NVNPLSPPETTSFAILPNVGYYEFIPVSEIVDPDNSEVDSTQNEPKTVGLTDVKIGEE
                     YEVVITNYAGFYRYRLGDLVRITGFYNSTPMFQFICRRNLMPTINIDKNTEKDLQLSV
                     ETAAKLLTNEKLELIDFTSVGGFIEISHIDLVSEPGHYVIFWEVSGEASDELLKECCN
                     CLDTSFVDAGYVTSRKCFAIGPLELRVLSRGTFQKMLDYSVQQGSVLNQYKTPRCVGA
                     ANQSVFQILCNNVVKSYLSTAYG"
     misc_feature    37..1692
                     /gene="LOC139839545"
                     /note="GH3 auxin-responsive promoter; Region: GH3;
                     pfam03321"
                     /db_xref="CDD:460885"
ORIGIN      
        1 atggagaaag aatttaatag tgaagaagtg attcaagaat ttgaagcttt gaccaaagat
       61 gccaaaagga tccacattga aactcttaaa caaatcttga aagaaaatag tgaagcagaa
      121 tacttgaaaa acttgaatgt ggatgctaca accgatcttg aaacctacac atctcgcgtc
      181 ccacttgtta cccacaaaga tcttgagccg tatattcaaa aaatcgccga tggtgcaccc
      241 tacccggtcc ttacccgaaa gccgattacc aacttttcat taagctctgg aactgctcaa
      301 gggaagcgca agtttgtacc ttacaatgag aaagtgactg aatttaccat gcaagtttta
      361 cagacttctt ttgcctttag aaacagggtg tttccgattg ccaaaaacgg gaaagctttg
      421 aactttctgt atagtagcaa gcagttcaca acgaaaggtg gtgtgatagc agcaactgcg
      481 tctacaaatg tgtgccgtag cccagagttc aagaaaacaa tgaaagcctt acaaacccca
      541 gcttgcagcc cagatgaagt cgtttttggg cccgattatc accaatcttt atactgtcat
      601 ctcctttgtg gactcatttt tcatgaagaa attcaagtta tatcttcttc ttttgcacat
      661 agcattgtgc attcctttag gacttttgaa caagtctggg aagaactctg taacgactta
      721 cgaaccggag tcttatcccc ccgtatcacg gttccatcta tccgaaccgc aatggccaac
      781 attttaaaac cgaaccctga attagctgac aaaattcata aaaaatgctc gggattaatc
      841 gattggcatg gtttgatccc cgaaatcttt cctaacacaa agtacattta cgggatcatg
      901 acaggatcaa tggaaccata tttggtcaaa ctcagacact atgctcgaga cataccttta
      961 caaagtggcg attatgggtc atctgaagga tggattggtg taaatgttaa cccgttgtca
     1021 ccacccgaaa ctaccagttt cgccatactt cctaatgtag gttattacga gtttataccc
     1081 gttagtgaaa tcgttgaccc tgataattct gaggttgatt cgacccagaa cgagcctaaa
     1141 acagtgggct tgactgacgt caaaatcggt gaagaatacg aggttgtaat tactaattat
     1201 gcgggttttt accgttatcg ccttggggat ttggttagaa taacgggatt ttataactcg
     1261 accccgatgt ttcagtttat ttgcagaaga aacttgatgc caaccatcaa cattgataaa
     1321 aacactgaga aagatttgca gttatcagtt gaaacggcag ctaagctctt aactaatgaa
     1381 aaactcgagc taattgattt tactagtgtt ggaggtttta ttgagatttc ccacatcgat
     1441 ctcgtgtcag agcccggtca ttacgtgatc ttttgggaag ttagtgggga agcaagcgat
     1501 gagttgttga aagaatgttg caactgttta gacacatctt ttgttgatgc aggctacgtg
     1561 acctcgcgaa agtgttttgc gattggacca cttgagcttc gagttctttc gaggggcacc
     1621 tttcaaaaga tgttggatta ttcggtccaa caagggtctg ttttgaacca gtacaagaca
     1681 ccgagatgtg tgggtgcggc taaccagagt gtgtttcaga tactatgcaa caatgttgtt
     1741 aagagttacc ttagtacagc ttatggttaa
//
LOCUS       XM_071829628            2403 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides telomere repeat-binding
            protein 3-like (LOC139839548), transcript variant X1, mRNA.
ACCESSION   XM_071829628
VERSION     XM_071829628.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2403
                     /gene="LOC139839548"
                     /note="telomere repeat-binding protein 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839548"
     CDS             199..2133
                     /gene="LOC139839548"
                     /codon_start=1
                     /product="telomere repeat-binding protein 3-like isoform
                     X1"
                     /protein_id="XP_071685729.1"
                     /db_xref="GeneID:139839548"
                     /translation="MVLKKRIYYGGFHGLLPPVIPKAPRSLRVRRRSLNQKTRENGGE
                     ICAFELLAAVAGKLLQESESSTSSIDILKEGVDHEQLEVKVDPVKSEHHDQESGVESE
                     LVAQPTNLHPVLNKSPQIENDSGSDHASIVTTSNFIKEIANSSTIETFENKSGINDTS
                     GKPENICDVSFGDNYPKAMEKQKKGLTRVPKKSNRDGHLSFYRDPVHINCSSRHRGIV
                     VNNNNNNNNNNNNNNNNNNNNNNNNRDDDEKYFSYSKCSTRRRVFGSRPRTGYKRVRK
                     MLSSKYWKASSKINEYQFADTTSGVRSLYQKRKSIYTRERFQADVASKRRKLFQHSSK
                     TAYIKEASSESMSNSVKFSIKSFKVPELYVEVPETATVGSLKRSVMEAVTAILQGQLH
                     VGVLLRGKKVRDDNKTLQQTGISQNCNLESLGFTLEPSSPEGSSSLVQPETPLLLPCN
                     TQQHLSRSPSSPITDGRFSNSSPGPPLSVTTLDDHIEKNEEGTTFPAEVTTQERVDDS
                     KALVLVPPLDAEAICMVPLSDNKPSKRYEISQRRTRRPFSVTEVEALVEAVEILGAGR
                     WRDVKMRAFDDADHRTYVDLKDKWKTLVHTASIGPQQRRGEPVPQDLLDRVLAAHAYW
                     SQQQSKQQHMKNHKTFGSPL"
     misc_feature    1249..1458
                     /gene="LOC139839548"
                     /note="Ubiquitin-like domain; Region: Ubiquitin_4;
                     pfam18036"
                     /db_xref="CDD:465624"
     misc_feature    1831..1983
                     /gene="LOC139839548"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; Region: SANT_TRF;
                     cd11660"
                     /db_xref="CDD:212558"
     misc_feature    order(1831..1839,1891..1893,1897..1902,1939..1941,
                     1945..1953,1957..1965,1969..1974)
                     /gene="LOC139839548"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     polyA_site      2403
                     /gene="LOC139839548"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttaacaacat caacaagggt tttaagcacc taacactcca tccatccatc catccatttc
       61 cttcccagtt accacatttt aatttcatca cttttttcac atcaataata ttctcaattc
      121 tttgtaatta tcgaaatcaa acgctacagt tacgtatcac ttgcgaatca ttcagacaca
      181 ggtatgtatg cctaaaatat ggtgttaaag aagagaatat attatggagg atttcatggt
      241 ttactgcccc ctgtgatacc taaagctcct agatccttga gggtgcgtag gaggagttta
      301 aatcaaaaaa cacgagaaaa tggtggtgaa atatgtgcgt ttgagttgtt ggcagctgta
      361 gctggcaagt tattgcaaga gagtgaaagt tcaacctcta gtattgacat tcttaaagaa
      421 ggcgttgacc atgaacaact tgaagtcaaa gtggaccccg ttaaatcaga gcatcatgat
      481 caagaaagcg gtgttgagag tgagcttgtc gctcaaccga ctaatcttca ccctgtacta
      541 aacaaatcgc cacaaattga aaatgattct ggttcagatc atgcttccat tgttacaact
      601 tctaatttca taaaagaaat cgctaacagt tcaacaatcg aaaccttcga aaataagagc
      661 ggaattaatg acacttccgg taaacctgag aatatatgtg atgttagctt cggtgataat
      721 tatcccaagg ccatggagaa acaaaaaaaa gggttgactc gtgtgccaaa aaagtcaaat
      781 cgtgacggac atctatcctt ttatagggat cctgttcaca ttaattgttc ttcaaggcat
      841 aggggcattg ttgtaaataa taataataat aataataata ataataataa taataataat
      901 aataataata ataataataa taataataga gatgatgatg aaaaatattt tagttacagt
      961 aaatgtagca ccaggcgtag ggtgtttgga tcacgaccgc gtacgggata caaaagagta
     1021 aggaagatgc tatcttctaa atactggaaa gcatcctcga aaattaacga atatcaattt
     1081 gccgacacta ctagtggagt taggtccttg taccaaaaaa ggaagagtat ttatacgaga
     1141 gaacggtttc aagcagacgt tgcatctaag agaaggaagt tatttcaaca tagctcgaaa
     1201 actgcgtata taaaggaggc aagcagtgaa agcatgtcta attcagttaa atttagcata
     1261 aagtccttta aagtgcctga actgtacgtt gaggtacccg aaactgcaac tgtaggttca
     1321 ctaaagagga gcgtaatgga ggctgttacg gctattttac aaggtcaatt acatgtagga
     1381 gtgcttcttc ggggcaaaaa agtaagagat gacaataaaa cgctgcaaca aactgggatt
     1441 tcccaaaact gtaaccttga aagtttaggg tttacattgg agcctagttc acctgaaggt
     1501 tcatcatctt tagttcaacc agaaactcca ttgttgctac catgcaacac acagcaacac
     1561 ctatccaggt ctccttctag tcctattacc gatgggcgtt tctcaaattc ttcaccgggc
     1621 ccccctcttt ctgtaactac tttggatgac catattgaga agaatgaaga aggtactacc
     1681 ttcccagctg aagttacaac acaagaacga gtggatgact ccaaagctct tgttcttgtt
     1741 ccaccattgg atgctgaggc aatttgtatg gttccattga gtgataataa accgagcaaa
     1801 agatacgaaa tttcacaacg gaggaccagg agaccgtttt ctgtaacaga agtggaagca
     1861 ctcgtggaag cggttgaaat cctcggagcc ggacgatggc gtgatgttaa aatgcgtgct
     1921 tttgatgatg cagatcatcg gacctatgtg gacttgaagg ataaatggaa gacgctggtt
     1981 cacacagcaa gcattggccc acagcaaaga aggggagaac ctgtgccaca ggatctactg
     2041 gaccgtgtgt tggctgcaca tgcctactgg tctcagcaac aatctaagca acagcatatg
     2101 aagaatcaca agacctttgg gtctccattg taaagtgtag ggatgatgat gatgatgacg
     2161 aaaaaatgta cttaggaaat atggatttgt tttaaacttg atgtagtaag tatgttaatc
     2221 ctttagttta tgtaattgta attgtaattg taattgtaat tgatttggtg gttgctgtaa
     2281 attatccggg attggaataa tggcattcta tcacaacttt attgatgggt tgccttgcct
     2341 gtttgatgta gatgataaca ttgtgcattt tgtaaattct gtaatgtatt tcatttcttt
     2401 tta
//
LOCUS       XM_071829629            2397 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides telomere repeat-binding
            protein 3-like (LOC139839548), transcript variant X2, mRNA.
ACCESSION   XM_071829629
VERSION     XM_071829629.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2397
                     /gene="LOC139839548"
                     /note="telomere repeat-binding protein 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139839548"
     CDS             199..2127
                     /gene="LOC139839548"
                     /codon_start=1
                     /product="telomere repeat-binding protein 3-like isoform
                     X2"
                     /protein_id="XP_071685730.1"
                     /db_xref="GeneID:139839548"
                     /translation="MVLKKRIYYGGFHGLLPPVIPKAPRSLRRRSLNQKTRENGGEIC
                     AFELLAAVAGKLLQESESSTSSIDILKEGVDHEQLEVKVDPVKSEHHDQESGVESELV
                     AQPTNLHPVLNKSPQIENDSGSDHASIVTTSNFIKEIANSSTIETFENKSGINDTSGK
                     PENICDVSFGDNYPKAMEKQKKGLTRVPKKSNRDGHLSFYRDPVHINCSSRHRGIVVN
                     NNNNNNNNNNNNNNNNNNNNNNNRDDDEKYFSYSKCSTRRRVFGSRPRTGYKRVRKML
                     SSKYWKASSKINEYQFADTTSGVRSLYQKRKSIYTRERFQADVASKRRKLFQHSSKTA
                     YIKEASSESMSNSVKFSIKSFKVPELYVEVPETATVGSLKRSVMEAVTAILQGQLHVG
                     VLLRGKKVRDDNKTLQQTGISQNCNLESLGFTLEPSSPEGSSSLVQPETPLLLPCNTQ
                     QHLSRSPSSPITDGRFSNSSPGPPLSVTTLDDHIEKNEEGTTFPAEVTTQERVDDSKA
                     LVLVPPLDAEAICMVPLSDNKPSKRYEISQRRTRRPFSVTEVEALVEAVEILGAGRWR
                     DVKMRAFDDADHRTYVDLKDKWKTLVHTASIGPQQRRGEPVPQDLLDRVLAAHAYWSQ
                     QQSKQQHMKNHKTFGSPL"
     misc_feature    1243..1452
                     /gene="LOC139839548"
                     /note="Ubiquitin-like domain; Region: Ubiquitin_4;
                     pfam18036"
                     /db_xref="CDD:465624"
     misc_feature    1825..1977
                     /gene="LOC139839548"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; Region: SANT_TRF;
                     cd11660"
                     /db_xref="CDD:212558"
     misc_feature    order(1825..1833,1885..1887,1891..1896,1933..1935,
                     1939..1947,1951..1959,1963..1968)
                     /gene="LOC139839548"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     polyA_site      2397
                     /gene="LOC139839548"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttaacaacat caacaagggt tttaagcacc taacactcca tccatccatc catccatttc
       61 cttcccagtt accacatttt aatttcatca cttttttcac atcaataata ttctcaattc
      121 tttgtaatta tcgaaatcaa acgctacagt tacgtatcac ttgcgaatca ttcagacaca
      181 ggtatgtatg cctaaaatat ggtgttaaag aagagaatat attatggagg atttcatggt
      241 ttactgcccc ctgtgatacc taaagctcct agatccttga ggaggaggag tttaaatcaa
      301 aaaacacgag aaaatggtgg tgaaatatgt gcgtttgagt tgttggcagc tgtagctggc
      361 aagttattgc aagagagtga aagttcaacc tctagtattg acattcttaa agaaggcgtt
      421 gaccatgaac aacttgaagt caaagtggac cccgttaaat cagagcatca tgatcaagaa
      481 agcggtgttg agagtgagct tgtcgctcaa ccgactaatc ttcaccctgt actaaacaaa
      541 tcgccacaaa ttgaaaatga ttctggttca gatcatgctt ccattgttac aacttctaat
      601 ttcataaaag aaatcgctaa cagttcaaca atcgaaacct tcgaaaataa gagcggaatt
      661 aatgacactt ccggtaaacc tgagaatata tgtgatgtta gcttcggtga taattatccc
      721 aaggccatgg agaaacaaaa aaaagggttg actcgtgtgc caaaaaagtc aaatcgtgac
      781 ggacatctat ccttttatag ggatcctgtt cacattaatt gttcttcaag gcataggggc
      841 attgttgtaa ataataataa taataataat aataataata ataataataa taataataat
      901 aataataata ataataataa tagagatgat gatgaaaaat attttagtta cagtaaatgt
      961 agcaccaggc gtagggtgtt tggatcacga ccgcgtacgg gatacaaaag agtaaggaag
     1021 atgctatctt ctaaatactg gaaagcatcc tcgaaaatta acgaatatca atttgccgac
     1081 actactagtg gagttaggtc cttgtaccaa aaaaggaaga gtatttatac gagagaacgg
     1141 tttcaagcag acgttgcatc taagagaagg aagttatttc aacatagctc gaaaactgcg
     1201 tatataaagg aggcaagcag tgaaagcatg tctaattcag ttaaatttag cataaagtcc
     1261 tttaaagtgc ctgaactgta cgttgaggta cccgaaactg caactgtagg ttcactaaag
     1321 aggagcgtaa tggaggctgt tacggctatt ttacaaggtc aattacatgt aggagtgctt
     1381 cttcggggca aaaaagtaag agatgacaat aaaacgctgc aacaaactgg gatttcccaa
     1441 aactgtaacc ttgaaagttt agggtttaca ttggagccta gttcacctga aggttcatca
     1501 tctttagttc aaccagaaac tccattgttg ctaccatgca acacacagca acacctatcc
     1561 aggtctcctt ctagtcctat taccgatggg cgtttctcaa attcttcacc gggcccccct
     1621 ctttctgtaa ctactttgga tgaccatatt gagaagaatg aagaaggtac taccttccca
     1681 gctgaagtta caacacaaga acgagtggat gactccaaag ctcttgttct tgttccacca
     1741 ttggatgctg aggcaatttg tatggttcca ttgagtgata ataaaccgag caaaagatac
     1801 gaaatttcac aacggaggac caggagaccg ttttctgtaa cagaagtgga agcactcgtg
     1861 gaagcggttg aaatcctcgg agccggacga tggcgtgatg ttaaaatgcg tgcttttgat
     1921 gatgcagatc atcggaccta tgtggacttg aaggataaat ggaagacgct ggttcacaca
     1981 gcaagcattg gcccacagca aagaagggga gaacctgtgc cacaggatct actggaccgt
     2041 gtgttggctg cacatgccta ctggtctcag caacaatcta agcaacagca tatgaagaat
     2101 cacaagacct ttgggtctcc attgtaaagt gtagggatga tgatgatgat gacgaaaaaa
     2161 tgtacttagg aaatatggat ttgttttaaa cttgatgtag taagtatgtt aatcctttag
     2221 tttatgtaat tgtaattgta attgtaattg taattgattt ggtggttgct gtaaattatc
     2281 cgggattgga ataatggcat tctatcacaa ctttattgat gggttgcctt gcctgtttga
     2341 tgtagatgat aacattgtgc attttgtaaa ttctgtaatg tatttcattt cttttta
//
LOCUS       XM_071829630            4012 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X1, mRNA.
ACCESSION   XM_071829630
VERSION     XM_071829630.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4012
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4012
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             1356..3908
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X1"
                     /protein_id="XP_071685731.1"
                     /db_xref="GeneID:139839549"
                     /translation="MENAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSST
                     PCPNPAHKGGSSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLKECRSTLLWA
                     LQNSGGSQICILHVHQPAESIHFGRIEDKVYVAVGNDLKECRSTLLWALQNSGGSQIC
                     ILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKYKQICQDTGVCAEVQYIETE
                     YIEKGIVEFVLQHNVRRLVMGAAADMQNSSRMVELRSKKAIYVCLHATASCQIQFIRK
                     GEVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQIILHTDNPTQDDGTTSKFNED
                     NQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQKDVIETKRKV
                     SVSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDIVNELEHAVFS
                     KDEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALNFYSEFESSEVKDAIRNFDR
                     SLKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQQEVNLVSKLRHPNLVTFIG
                     ACPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHIAAELCISLIFLLSCGVVHG
                     NLKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSEYMDPVYLSTGEFTTNSDAY
                     SFGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSAGDWPFVQAQQLAVLALSCC
                     DLVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRDIPHYFVCPIFQDTMGDPVV
                     AADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNHALRSAIQEWLQQP"
     misc_feature    1746..2186
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    2388..>2807
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    2889..3611
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2889..2900,2907..2909,2913..2915,2946..2948,
                     2952..2954,3039..3041,3081..3092,3228..3230,3240..3245,
                     3249..3251,3279..3284)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3696..3863
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      4012
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaatttaaag acctctccat accattcagt ggctacatat ttccctcagt acccttttat
       61 tctcattatc ttcccacatc ttcaaccatc tgcaactcgt aggatccttc atccaagttt
      121 gatttctatc accagcaagg ttgcaatttg gtggggattc tatgtaaaag tgctttaatt
      181 ttttgtgggt attgttgttt tttgtgagat ctggatcggt caattagagt tacacataaa
      241 ttatagggta atttcatgtt tggaaatttt agtgggtatt gttgtttttt atttttattt
      301 tgttatgaat gtttagatat ttatattatt gttgtttttt taagtataat ttttgtaaag
      361 gtatagatat tgatataagg ttaatatggt aattttatat cattcagagt gttgattcag
      421 aactcttatc aaacagtgag ttttcattca gaacgatact gattcagaac ttttgtatca
      481 ttcagagctc tgaatcattc agtgctaaat cattcagttt tatcaaacgc atcctcagtg
      541 ttgtaacaaa cggccgagac tggcgtcgca aaggttttac aatgttaccg ttgcaacgga
      601 cctaaaaacg gttaaaaacg gtcaacaacg tcaaaaagac ggtcaacaac ggccgagacg
      661 gcaaaaaacg tccgagacgg ggtcgagacg aatgttgacc aacattgact ttttaaatat
      721 ttcaaacata aatatttaaa atataaatat ttcaaattaa aggcaaatat ctatgtttac
      781 tttgaaatat ttatgtttgt aatgtatata aaaagttaac gttggtcagc atccgtctcg
      841 accctatttt ttccgttgtg acgttttaaa gtccctaccg tctggagccc ataaccttgt
      901 cagcactaca atttctctga aattaagtaa ttaacacgcc tgcttctcaa tataaataca
      961 tacacatata tattctcttt tcttcgaatt ttccagtaaa aatatatact cctatcaaaa
     1021 atttccaaca gatcatcatt tttataactt tagtttcagt tttccattag tttggtagtc
     1081 tgttcaaatt ttttctagcg tgtttgcagt tttgttttct tatcatggta tgcaagtttc
     1141 tctatattta tcgatacata tgtgtccatt taaagtgtag atatgaaatg ggaattttag
     1201 tctaatgcat agccgtaata tcaagcatta cgtttgtaga ttgtttcgat agatatgaaa
     1261 atgggtttag ggtctatctg acataaccct agtctaacat ttattagcac aaaatagtga
     1321 gttgcagatt gattgatttg gtcaattttg tatcaatgga gaatgcacaa aggattagtc
     1381 agataatgta tccacttgat actgacgacg acgaagatat cgtagaagcg gttcaagatt
     1441 tgttcaaaga agttcatgtt ggtgatcgag ttggttcttc ttcgactccg tgtcccaatc
     1501 cggcacataa aggtgggtcc tccaatgtta taacatacaa gatcgagaat cgagccggaa
     1561 aaaaaattgt aaaaaaaatg gtaaatggtc gtattgagga caaagtctac gtagctgttg
     1621 ggaatgactt gaaagaatgt cggtcaactc tgctgtgggc cctacagaat tcaggaggta
     1681 gtcagatatg tatacttcat gtccaccaac ctgcagaatc aatccacttt ggtcgtattg
     1741 aggacaaagt ctacgtagct gttgggaatg acttgaaaga atgtcggtca actctgctgt
     1801 gggccctaca gaattcagga ggtagtcaga tatgtatact tcatgtccac caacctgcag
     1861 aatcaatcca ctttgatcac cttcaagcat gtcaagtcac agcataccat gatatggata
     1921 cggaagatat gcaccagctt ctcgataaat ataaacagat atgtcaggat acgggggtgt
     1981 gtgcggaggt gcagtatatt gaaacggaat atatcgagaa aggtattgtt gaatttgtac
     2041 ttcaacacaa tgtcagaagg cttgtcatgg gagcagccgc agacatgcaa aattcaagta
     2101 gaatggtgga attaagatcc aagaaagcca tatatgtgtg tttacatgcg actgcttcct
     2161 gtcaaattca gtttatacgc aaaggagaag ttatttttac taggaaaggt tggttgagtg
     2221 aagcagacga accgtttgtc actgattctg aagagagtat tccgagttca gcatatgtta
     2281 gtgaaggaca tcaaattata ttacatactg acaacccaac tcaagacgat ggtacaacgt
     2341 ctaaattcaa cgaggacaat caaaacgcta catcattcag tctcagacaa gaaagaagta
     2401 taaatgatga gctttatgac ctgcttgtac aagccattga agatgcagat aagtccaaac
     2461 gagatgcttt tgaggagtct atcaggtgtc ggaaattaca aaaagatgtc atagagacta
     2521 agcgcaaggt gagtgtatct gaaaagttgt gtgcgaaaga actgagaata aggctagagg
     2581 ttgaagagat gctagaaaga accgtggaag aactccaaat ggaactcgaa caaaagtcat
     2641 ctctagaaag tcaaattgca gattctgtcg atattgtaaa cgagcttgaa catgcagtgt
     2701 tctctaagga tgaacagctt aaaatttata aaaaagaacg tgacaaattg aaggtagaat
     2761 gtgatgatgc agttagacta gtcgaggaat taacagagaa aaatgcaaac gaagccttaa
     2821 acttttactc tgagtttgag tcatcagaag ttaaagacgc cattcgtaac tttgaccggt
     2881 cacttaagat aggagaaggg atttattata ctacatacaa aggtttactt cggcatacca
     2941 aagtggtcgt aaaggtgttt tactctcgta attctcaagt ccactcagga tatcagcagg
     3001 aggtgaatct tgtaagcaaa cttaggcacc caaatcttgt aaccttcata ggagcctgcc
     3061 cagataatcg gatgataatt tacgagtatc tttctggagg tagccttgaa gatcggctcg
     3121 actgtaaaga cgatactcca ccattatcat ggcaaaatag aatccacatt gcagcagagt
     3181 tatgcatctc tcttattttt ctactttcat gtggcgttgt tcatggtaat ctaaagccaa
     3241 ctaacatcct tctagaccgg aactttgtta ctaaattaag tgactttgga atccatcatg
     3301 aactgtccca aaacgagatc ttaagcaata attacccatc cgaatatatg gaccctgtgt
     3361 atctttctac aggagagttt actacgaatt cagatgctta ttctttcggt attatattat
     3421 tgaggctatt aacgggtaaa cctgctttgg ggataataaa tgaagtgcaa ttagcagtag
     3481 atgatgataa tttgaagaat atattggatt ctagtgctgg agactggcca tttgtgcagg
     3541 cacaacaatt ggctgttctg gcattgagtt gttgtgatct tgttactaca aataggccca
     3601 attttgaaac cgggatttgg agggtggttg aaccgatacg cgcttcgtgt ggactttgtt
     3661 cgtctaagtc aggttccgaa agacgacgag atattccaca ctactttgtt tgtccaatct
     3721 ttcaggatac tatgggagat ccggtggtgg cagctgatgg atttacatat gaagaagagg
     3781 ctataaaagg atggttagac agtggccata acacctcacc tatgaccaac attaagctag
     3841 ccaacaccaa ccttgtcccg aaccatgcac tacggtctgc cattcaagaa tggctccagc
     3901 aaccataaat cgttttcttt gatattcatt ggttaaattt gtatatggaa aacgtcgatg
     3961 atatcataat ttgtatgtga aacgttgcta gtaatgttat ttgatccgga ta
//
LOCUS       XM_071829631            2812 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X2, mRNA.
ACCESSION   XM_071829631
VERSION     XM_071829631.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2812
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             156..2708
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X1"
                     /protein_id="XP_071685732.1"
                     /db_xref="GeneID:139839549"
                     /translation="MENAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSST
                     PCPNPAHKGGSSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLKECRSTLLWA
                     LQNSGGSQICILHVHQPAESIHFGRIEDKVYVAVGNDLKECRSTLLWALQNSGGSQIC
                     ILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKYKQICQDTGVCAEVQYIETE
                     YIEKGIVEFVLQHNVRRLVMGAAADMQNSSRMVELRSKKAIYVCLHATASCQIQFIRK
                     GEVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQIILHTDNPTQDDGTTSKFNED
                     NQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQKDVIETKRKV
                     SVSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDIVNELEHAVFS
                     KDEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALNFYSEFESSEVKDAIRNFDR
                     SLKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQQEVNLVSKLRHPNLVTFIG
                     ACPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHIAAELCISLIFLLSCGVVHG
                     NLKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSEYMDPVYLSTGEFTTNSDAY
                     SFGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSAGDWPFVQAQQLAVLALSCC
                     DLVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRDIPHYFVCPIFQDTMGDPVV
                     AADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNHALRSAIQEWLQQP"
     misc_feature    546..986
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1188..>1607
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1689..2411
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1689..1700,1707..1709,1713..1715,1746..1748,
                     1752..1754,1839..1841,1881..1892,2028..2030,2040..2045,
                     2049..2051,2079..2084)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2496..2663
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      2812
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataccattca gtggctacat atttccctca gtaccctttt attctcatta tcttcccaca
       61 tcttcaacca tctgcaactc gtaggatcct tcatccaagt ttgatttcta tcaccagtga
      121 gttgcagatt gattgatttg gtcaattttg tatcaatgga gaatgcacaa aggattagtc
      181 agataatgta tccacttgat actgacgacg acgaagatat cgtagaagcg gttcaagatt
      241 tgttcaaaga agttcatgtt ggtgatcgag ttggttcttc ttcgactccg tgtcccaatc
      301 cggcacataa aggtgggtcc tccaatgtta taacatacaa gatcgagaat cgagccggaa
      361 aaaaaattgt aaaaaaaatg gtaaatggtc gtattgagga caaagtctac gtagctgttg
      421 ggaatgactt gaaagaatgt cggtcaactc tgctgtgggc cctacagaat tcaggaggta
      481 gtcagatatg tatacttcat gtccaccaac ctgcagaatc aatccacttt ggtcgtattg
      541 aggacaaagt ctacgtagct gttgggaatg acttgaaaga atgtcggtca actctgctgt
      601 gggccctaca gaattcagga ggtagtcaga tatgtatact tcatgtccac caacctgcag
      661 aatcaatcca ctttgatcac cttcaagcat gtcaagtcac agcataccat gatatggata
      721 cggaagatat gcaccagctt ctcgataaat ataaacagat atgtcaggat acgggggtgt
      781 gtgcggaggt gcagtatatt gaaacggaat atatcgagaa aggtattgtt gaatttgtac
      841 ttcaacacaa tgtcagaagg cttgtcatgg gagcagccgc agacatgcaa aattcaagta
      901 gaatggtgga attaagatcc aagaaagcca tatatgtgtg tttacatgcg actgcttcct
      961 gtcaaattca gtttatacgc aaaggagaag ttatttttac taggaaaggt tggttgagtg
     1021 aagcagacga accgtttgtc actgattctg aagagagtat tccgagttca gcatatgtta
     1081 gtgaaggaca tcaaattata ttacatactg acaacccaac tcaagacgat ggtacaacgt
     1141 ctaaattcaa cgaggacaat caaaacgcta catcattcag tctcagacaa gaaagaagta
     1201 taaatgatga gctttatgac ctgcttgtac aagccattga agatgcagat aagtccaaac
     1261 gagatgcttt tgaggagtct atcaggtgtc ggaaattaca aaaagatgtc atagagacta
     1321 agcgcaaggt gagtgtatct gaaaagttgt gtgcgaaaga actgagaata aggctagagg
     1381 ttgaagagat gctagaaaga accgtggaag aactccaaat ggaactcgaa caaaagtcat
     1441 ctctagaaag tcaaattgca gattctgtcg atattgtaaa cgagcttgaa catgcagtgt
     1501 tctctaagga tgaacagctt aaaatttata aaaaagaacg tgacaaattg aaggtagaat
     1561 gtgatgatgc agttagacta gtcgaggaat taacagagaa aaatgcaaac gaagccttaa
     1621 acttttactc tgagtttgag tcatcagaag ttaaagacgc cattcgtaac tttgaccggt
     1681 cacttaagat aggagaaggg atttattata ctacatacaa aggtttactt cggcatacca
     1741 aagtggtcgt aaaggtgttt tactctcgta attctcaagt ccactcagga tatcagcagg
     1801 aggtgaatct tgtaagcaaa cttaggcacc caaatcttgt aaccttcata ggagcctgcc
     1861 cagataatcg gatgataatt tacgagtatc tttctggagg tagccttgaa gatcggctcg
     1921 actgtaaaga cgatactcca ccattatcat ggcaaaatag aatccacatt gcagcagagt
     1981 tatgcatctc tcttattttt ctactttcat gtggcgttgt tcatggtaat ctaaagccaa
     2041 ctaacatcct tctagaccgg aactttgtta ctaaattaag tgactttgga atccatcatg
     2101 aactgtccca aaacgagatc ttaagcaata attacccatc cgaatatatg gaccctgtgt
     2161 atctttctac aggagagttt actacgaatt cagatgctta ttctttcggt attatattat
     2221 tgaggctatt aacgggtaaa cctgctttgg ggataataaa tgaagtgcaa ttagcagtag
     2281 atgatgataa tttgaagaat atattggatt ctagtgctgg agactggcca tttgtgcagg
     2341 cacaacaatt ggctgttctg gcattgagtt gttgtgatct tgttactaca aataggccca
     2401 attttgaaac cgggatttgg agggtggttg aaccgatacg cgcttcgtgt ggactttgtt
     2461 cgtctaagtc aggttccgaa agacgacgag atattccaca ctactttgtt tgtccaatct
     2521 ttcaggatac tatgggagat ccggtggtgg cagctgatgg atttacatat gaagaagagg
     2581 ctataaaagg atggttagac agtggccata acacctcacc tatgaccaac attaagctag
     2641 ccaacaccaa ccttgtcccg aaccatgcac tacggtctgc cattcaagaa tggctccagc
     2701 aaccataaat cgttttcttt gatattcatt ggttaaattt gtatatggaa aacgtcgatg
     2761 atatcataat ttgtatgtga aacgttgcta gtaatgttat ttgatccgga ta
//
LOCUS       XM_071829632            4343 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X3, mRNA.
ACCESSION   XM_071829632
VERSION     XM_071829632.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4343
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4343
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             1690..4239
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X2"
                     /protein_id="XP_071685733.1"
                     /db_xref="GeneID:139839549"
                     /translation="MENAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSST
                     PCPNPAHKGGSSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLKECRSTLLWA
                     LQNSGGSQICILHVHQPAESIHFGRIEDKVYVAVGNDLKECRSTLLWALQNSGGSQIC
                     ILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKYKQICQDTGVCAEVQYIETE
                     YIEKGIVEFVLQHNVRRLVMGAAADMQNSRMVELRSKKAIYVCLHATASCQIQFIRKG
                     EVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQIILHTDNPTQDDGTTSKFNEDN
                     QNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQKDVIETKRKVS
                     VSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDIVNELEHAVFSK
                     DEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALNFYSEFESSEVKDAIRNFDRS
                     LKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQQEVNLVSKLRHPNLVTFIGA
                     CPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHIAAELCISLIFLLSCGVVHGN
                     LKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSEYMDPVYLSTGEFTTNSDAYS
                     FGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSAGDWPFVQAQQLAVLALSCCD
                     LVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRDIPHYFVCPIFQDTMGDPVVA
                     ADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNHALRSAIQEWLQQP"
     misc_feature    2080..2517
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    2719..>3138
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    3220..3942
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3220..3231,3238..3240,3244..3246,3277..3279,
                     3283..3285,3370..3372,3412..3423,3559..3561,3571..3576,
                     3580..3582,3610..3615)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    4027..4194
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      4343
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gctacatatt tccctcagta cccttttatt ctcattatct tcccacatct tcaaccatct
       61 gcaactcgta ggatccttca tccaagtttg atttctatca ccaggtaata tcatcttcat
      121 catcaataaa cttcaacttt aaaatctttt tttatcttct accttttttt atcatcttca
      181 tcaccaataa acttcatcca catccgatta aaatctttct ttaaaattat ttttttctat
      241 cttctacctt atatgtatat ttatcttcat catcaatata tcttcttgtt tttaccaaaa
      301 attaaccaac gtaaacatac ctacaatcat gtacaaacta aatctctctt acatgatttt
      361 agggatttct tataataatg aaatttaggg tttaaactct ctttaatttc agcgacttca
      421 agtagcgctt cactcatatt ttgtttcctg tttgcctata taccttcagc aaggttgcaa
      481 tttggtgggg attctatgta aaagtgcttt aattttttgt gggtattgtt gttttttgtg
      541 agatctggat cggtcaatta gagttacaca taaattatag ggtaatttca tgtttggaaa
      601 ttttagtggg tattgttgtt ttttattttt attttgttat gaatgtttag atatttatat
      661 tattgttgtt tttttaagta taatttttgt aaaggtatag atattgatat aaggttaata
      721 tggtaatttt atatcattca gagtgttgat tcagaactct tatcaaacag tgagttttca
      781 ttcagaacga tactgattca gaacttttgt atcattcaga gctctgaatc attcagtgct
      841 aaatcattca gttttatcaa acgcatcctc agtgttgtaa caaacggccg agactggcgt
      901 cgcaaaggtt ttacaatgtt accgttgcaa cggacctaaa aacggttaaa aacggtcaac
      961 aacgtcaaaa agacggtcaa caacggccga gacggcaaaa aacgtccgag acggggtcga
     1021 gacgaatgtt gaccaacatt gactttttaa atatttcaaa cataaatatt taaaatataa
     1081 atatttcaaa ttaaaggcaa atatctatgt ttactttgaa atatttatgt ttgtaatgta
     1141 tataaaaagt taacgttggt cagcatccgt ctcgacccta ttttttccgt tgtgacgttt
     1201 taaagtccct accgtctgga gcccataacc ttgtcagcac tacaatttct ctgaaattaa
     1261 gtaattaaca cgcctgcttc tcaatataaa tacatacaca tatatattct cttttcttcg
     1321 aattttccag taaaaatata tactcctatc aaaaatttcc aacagatcat catttttata
     1381 actttagttt cagttttcca ttagtttggt agtctgttca aattttttct agcgtgtttg
     1441 cagttttgtt ttcttatcat ggtatgcaag tttctctata tttatcgata catatgtgtc
     1501 catttaaagt gtagatatga aatgggaatt ttagtctaat gcatagccgt aatatcaagc
     1561 attacgtttg tagattgttt cgatagatat gaaaatgggt ttagggtcta tctgacataa
     1621 ccctagtcta acatttatta gcacaaaata gtgagttgca gattgattga tttggtcaat
     1681 tttgtatcaa tggagaatgc acaaaggatt agtcagataa tgtatccact tgatactgac
     1741 gacgacgaag atatcgtaga agcggttcaa gatttgttca aagaagttca tgttggtgat
     1801 cgagttggtt cttcttcgac tccgtgtccc aatccggcac ataaaggtgg gtcctccaat
     1861 gttataacat acaagatcga gaatcgagcc ggaaaaaaaa ttgtaaaaaa aatggtaaat
     1921 ggtcgtattg aggacaaagt ctacgtagct gttgggaatg acttgaaaga atgtcggtca
     1981 actctgctgt gggccctaca gaattcagga ggtagtcaga tatgtatact tcatgtccac
     2041 caacctgcag aatcaatcca ctttggtcgt attgaggaca aagtctacgt agctgttggg
     2101 aatgacttga aagaatgtcg gtcaactctg ctgtgggccc tacagaattc aggaggtagt
     2161 cagatatgta tacttcatgt ccaccaacct gcagaatcaa tccactttga tcaccttcaa
     2221 gcatgtcaag tcacagcata ccatgatatg gatacggaag atatgcacca gcttctcgat
     2281 aaatataaac agatatgtca ggatacgggg gtgtgtgcgg aggtgcagta tattgaaacg
     2341 gaatatatcg agaaaggtat tgttgaattt gtacttcaac acaatgtcag aaggcttgtc
     2401 atgggagcag ccgcagacat gcaaaattca agaatggtgg aattaagatc caagaaagcc
     2461 atatatgtgt gtttacatgc gactgcttcc tgtcaaattc agtttatacg caaaggagaa
     2521 gttattttta ctaggaaagg ttggttgagt gaagcagacg aaccgtttgt cactgattct
     2581 gaagagagta ttccgagttc agcatatgtt agtgaaggac atcaaattat attacatact
     2641 gacaacccaa ctcaagacga tggtacaacg tctaaattca acgaggacaa tcaaaacgct
     2701 acatcattca gtctcagaca agaaagaagt ataaatgatg agctttatga cctgcttgta
     2761 caagccattg aagatgcaga taagtccaaa cgagatgctt ttgaggagtc tatcaggtgt
     2821 cggaaattac aaaaagatgt catagagact aagcgcaagg tgagtgtatc tgaaaagttg
     2881 tgtgcgaaag aactgagaat aaggctagag gttgaagaga tgctagaaag aaccgtggaa
     2941 gaactccaaa tggaactcga acaaaagtca tctctagaaa gtcaaattgc agattctgtc
     3001 gatattgtaa acgagcttga acatgcagtg ttctctaagg atgaacagct taaaatttat
     3061 aaaaaagaac gtgacaaatt gaaggtagaa tgtgatgatg cagttagact agtcgaggaa
     3121 ttaacagaga aaaatgcaaa cgaagcctta aacttttact ctgagtttga gtcatcagaa
     3181 gttaaagacg ccattcgtaa ctttgaccgg tcacttaaga taggagaagg gatttattat
     3241 actacataca aaggtttact tcggcatacc aaagtggtcg taaaggtgtt ttactctcgt
     3301 aattctcaag tccactcagg atatcagcag gaggtgaatc ttgtaagcaa acttaggcac
     3361 ccaaatcttg taaccttcat aggagcctgc ccagataatc ggatgataat ttacgagtat
     3421 ctttctggag gtagccttga agatcggctc gactgtaaag acgatactcc accattatca
     3481 tggcaaaata gaatccacat tgcagcagag ttatgcatct ctcttatttt tctactttca
     3541 tgtggcgttg ttcatggtaa tctaaagcca actaacatcc ttctagaccg gaactttgtt
     3601 actaaattaa gtgactttgg aatccatcat gaactgtccc aaaacgagat cttaagcaat
     3661 aattacccat ccgaatatat ggaccctgtg tatctttcta caggagagtt tactacgaat
     3721 tcagatgctt attctttcgg tattatatta ttgaggctat taacgggtaa acctgctttg
     3781 gggataataa atgaagtgca attagcagta gatgatgata atttgaagaa tatattggat
     3841 tctagtgctg gagactggcc atttgtgcag gcacaacaat tggctgttct ggcattgagt
     3901 tgttgtgatc ttgttactac aaataggccc aattttgaaa ccgggatttg gagggtggtt
     3961 gaaccgatac gcgcttcgtg tggactttgt tcgtctaagt caggttccga aagacgacga
     4021 gatattccac actactttgt ttgtccaatc tttcaggata ctatgggaga tccggtggtg
     4081 gcagctgatg gatttacata tgaagaagag gctataaaag gatggttaga cagtggccat
     4141 aacacctcac ctatgaccaa cattaagcta gccaacacca accttgtccc gaaccatgca
     4201 ctacggtctg ccattcaaga atggctccag caaccataaa tcgttttctt tgatattcat
     4261 tggttaaatt tgtatatgga aaacgtcgat gatatcataa tttgtatgtg aaacgttgct
     4321 agtaatgtta tttgatccgg ata
//
LOCUS       XM_071829633            2667 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X4, mRNA.
ACCESSION   XM_071829633
VERSION     XM_071829633.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2667
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             41..2563
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X3"
                     /protein_id="XP_071685734.1"
                     /db_xref="GeneID:139839549"
                     /translation="MYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSSTPCPNPAHKGG
                     SSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLKECRSTLLWALQNSGGSQIC
                     ILHVHQPAESIHFGRIEDKVYVAVGNDLKECRSTLLWALQNSGGSQICILHVHQPAES
                     IHFDHLQACQVTAYHDMDTEDMHQLLDKYKQICQDTGVCAEVQYIETEYIEKGIVEFV
                     LQHNVRRLVMGAAADMQNSSRMVELRSKKAIYVCLHATASCQIQFIRKGEVIFTRKGW
                     LSEADEPFVTDSEESIPSSAYVSEGHQIILHTDNPTQDDGTTSKFNEDNQNATSFSLR
                     QERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQKDVIETKRKVSVSEKLCAKE
                     LRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDIVNELEHAVFSKDEQLKIYKK
                     ERDKLKVECDDAVRLVEELTEKNANEALNFYSEFESSEVKDAIRNFDRSLKIGEGIYY
                     TTYKGLLRHTKVVVKVFYSRNSQVHSGYQQEVNLVSKLRHPNLVTFIGACPDNRMIIY
                     EYLSGGSLEDRLDCKDDTPPLSWQNRIHIAAELCISLIFLLSCGVVHGNLKPTNILLD
                     RNFVTKLSDFGIHHELSQNEILSNNYPSEYMDPVYLSTGEFTTNSDAYSFGIILLRLL
                     TGKPALGIINEVQLAVDDDNLKNILDSSAGDWPFVQAQQLAVLALSCCDLVTTNRPNF
                     ETGIWRVVEPIRASCGLCSSKSGSERRRDIPHYFVCPIFQDTMGDPVVAADGFTYEEE
                     AIKGWLDSGHNTSPMTNIKLANTNLVPNHALRSAIQEWLQQP"
     misc_feature    401..841
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1043..>1462
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1544..2266
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1544..1555,1562..1564,1568..1570,1601..1603,
                     1607..1609,1694..1696,1736..1747,1883..1885,1895..1900,
                     1904..1906,1934..1939)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2351..2518
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      2667
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgatttctat caccagaatg cacaaaggat tagtcagata atgtatccac ttgatactga
       61 cgacgacgaa gatatcgtag aagcggttca agatttgttc aaagaagttc atgttggtga
      121 tcgagttggt tcttcttcga ctccgtgtcc caatccggca cataaaggtg ggtcctccaa
      181 tgttataaca tacaagatcg agaatcgagc cggaaaaaaa attgtaaaaa aaatggtaaa
      241 tggtcgtatt gaggacaaag tctacgtagc tgttgggaat gacttgaaag aatgtcggtc
      301 aactctgctg tgggccctac agaattcagg aggtagtcag atatgtatac ttcatgtcca
      361 ccaacctgca gaatcaatcc actttggtcg tattgaggac aaagtctacg tagctgttgg
      421 gaatgacttg aaagaatgtc ggtcaactct gctgtgggcc ctacagaatt caggaggtag
      481 tcagatatgt atacttcatg tccaccaacc tgcagaatca atccactttg atcaccttca
      541 agcatgtcaa gtcacagcat accatgatat ggatacggaa gatatgcacc agcttctcga
      601 taaatataaa cagatatgtc aggatacggg ggtgtgtgcg gaggtgcagt atattgaaac
      661 ggaatatatc gagaaaggta ttgttgaatt tgtacttcaa cacaatgtca gaaggcttgt
      721 catgggagca gccgcagaca tgcaaaattc aagtagaatg gtggaattaa gatccaagaa
      781 agccatatat gtgtgtttac atgcgactgc ttcctgtcaa attcagttta tacgcaaagg
      841 agaagttatt tttactagga aaggttggtt gagtgaagca gacgaaccgt ttgtcactga
      901 ttctgaagag agtattccga gttcagcata tgttagtgaa ggacatcaaa ttatattaca
      961 tactgacaac ccaactcaag acgatggtac aacgtctaaa ttcaacgagg acaatcaaaa
     1021 cgctacatca ttcagtctca gacaagaaag aagtataaat gatgagcttt atgacctgct
     1081 tgtacaagcc attgaagatg cagataagtc caaacgagat gcttttgagg agtctatcag
     1141 gtgtcggaaa ttacaaaaag atgtcataga gactaagcgc aaggtgagtg tatctgaaaa
     1201 gttgtgtgcg aaagaactga gaataaggct agaggttgaa gagatgctag aaagaaccgt
     1261 ggaagaactc caaatggaac tcgaacaaaa gtcatctcta gaaagtcaaa ttgcagattc
     1321 tgtcgatatt gtaaacgagc ttgaacatgc agtgttctct aaggatgaac agcttaaaat
     1381 ttataaaaaa gaacgtgaca aattgaaggt agaatgtgat gatgcagtta gactagtcga
     1441 ggaattaaca gagaaaaatg caaacgaagc cttaaacttt tactctgagt ttgagtcatc
     1501 agaagttaaa gacgccattc gtaactttga ccggtcactt aagataggag aagggattta
     1561 ttatactaca tacaaaggtt tacttcggca taccaaagtg gtcgtaaagg tgttttactc
     1621 tcgtaattct caagtccact caggatatca gcaggaggtg aatcttgtaa gcaaacttag
     1681 gcacccaaat cttgtaacct tcataggagc ctgcccagat aatcggatga taatttacga
     1741 gtatctttct ggaggtagcc ttgaagatcg gctcgactgt aaagacgata ctccaccatt
     1801 atcatggcaa aatagaatcc acattgcagc agagttatgc atctctctta tttttctact
     1861 ttcatgtggc gttgttcatg gtaatctaaa gccaactaac atccttctag accggaactt
     1921 tgttactaaa ttaagtgact ttggaatcca tcatgaactg tcccaaaacg agatcttaag
     1981 caataattac ccatccgaat atatggaccc tgtgtatctt tctacaggag agtttactac
     2041 gaattcagat gcttattctt tcggtattat attattgagg ctattaacgg gtaaacctgc
     2101 tttggggata ataaatgaag tgcaattagc agtagatgat gataatttga agaatatatt
     2161 ggattctagt gctggagact ggccatttgt gcaggcacaa caattggctg ttctggcatt
     2221 gagttgttgt gatcttgtta ctacaaatag gcccaatttt gaaaccggga tttggagggt
     2281 ggttgaaccg atacgcgctt cgtgtggact ttgttcgtct aagtcaggtt ccgaaagacg
     2341 acgagatatt ccacactact ttgtttgtcc aatctttcag gatactatgg gagatccggt
     2401 ggtggcagct gatggattta catatgaaga agaggctata aaaggatggt tagacagtgg
     2461 ccataacacc tcacctatga ccaacattaa gctagccaac accaaccttg tcccgaacca
     2521 tgcactacgg tctgccattc aagaatggct ccagcaacca taaatcgttt tctttgatat
     2581 tcattggtta aatttgtata tggaaaacgt cgatgatatc ataatttgta tgtgaaacgt
     2641 tgctagtaat gttatttgat ccggata
//
LOCUS       XM_071829634            4269 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X5, mRNA.
ACCESSION   XM_071829634
VERSION     XM_071829634.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4269
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             1688..4165
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X4"
                     /protein_id="XP_071685735.1"
                     /db_xref="GeneID:139839549"
                     /translation="MENAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSST
                     PCPNPAHKGRIEDKVYVAVGNDLKECRSTLLWALQNSGGSQICILHVHQPAESIHFGR
                     IEDKVYVAVGNDLKECRSTLLWALQNSGGSQICILHVHQPAESIHFDHLQACQVTAYH
                     DMDTEDMHQLLDKYKQICQDTGVCAEVQYIETEYIEKGIVEFVLQHNVRRLVMGAAAD
                     MQNSSRMVELRSKKAIYVCLHATASCQIQFIRKGEVIFTRKGWLSEADEPFVTDSEES
                     IPSSAYVSEGHQIILHTDNPTQDDGTTSKFNEDNQNATSFSLRQERSINDELYDLLVQ
                     AIEDADKSKRDAFEESIRCRKLQKDVIETKRKVSVSEKLCAKELRIRLEVEEMLERTV
                     EELQMELEQKSSLESQIADSVDIVNELEHAVFSKDEQLKIYKKERDKLKVECDDAVRL
                     VEELTEKNANEALNFYSEFESSEVKDAIRNFDRSLKIGEGIYYTTYKGLLRHTKVVVK
                     VFYSRNSQVHSGYQQEVNLVSKLRHPNLVTFIGACPDNRMIIYEYLSGGSLEDRLDCK
                     DDTPPLSWQNRIHIAAELCISLIFLLSCGVVHGNLKPTNILLDRNFVTKLSDFGIHHE
                     LSQNEILSNNYPSEYMDPVYLSTGEFTTNSDAYSFGIILLRLLTGKPALGIINEVQLA
                     VDDDNLKNILDSSAGDWPFVQAQQLAVLALSCCDLVTTNRPNFETGIWRVVEPIRASC
                     GLCSSKSGSERRRDIPHYFVCPIFQDTMGDPVVAADGFTYEEEAIKGWLDSGHNTSPM
                     TNIKLANTNLVPNHALRSAIQEWLQQP"
     misc_feature    2003..2443
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    2645..>3064
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    3146..3868
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3146..3157,3164..3166,3170..3172,3203..3205,
                     3209..3211,3296..3298,3338..3349,3485..3487,3497..3502,
                     3506..3508,3536..3541)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3953..4120
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      4269
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacatatttc cctcagtacc cttttattct cattatcttc ccacatcttc aaccatctgc
       61 aactcgtagg atccttcatc caagtttgat ttctatcacc aggtaatatc atcttcatca
      121 tcaataaact tcaactttaa aatctttttt tatcttctac ctttttttat catcttcatc
      181 accaataaac ttcatccaca tccgattaaa atctttcttt aaaattattt ttttctatct
      241 tctaccttat atgtatattt atcttcatca tcaatatatc ttcttgtttt taccaaaaat
      301 taaccaacgt aaacatacct acaatcatgt acaaactaaa tctctcttac atgattttag
      361 ggatttctta taataatgaa atttagggtt taaactctct ttaatttcag cgacttcaag
      421 tagcgcttca ctcatatttt gtttcctgtt tgcctatata ccttcagcaa ggttgcaatt
      481 tggtggggat tctatgtaaa agtgctttaa ttttttgtgg gtattgttgt tttttgtgag
      541 atctggatcg gtcaattaga gttacacata aattataggg taatttcatg tttggaaatt
      601 ttagtgggta ttgttgtttt ttatttttat tttgttatga atgtttagat atttatatta
      661 ttgttgtttt tttaagtata atttttgtaa aggtatagat attgatataa ggttaatatg
      721 gtaattttat atcattcaga gtgttgattc agaactctta tcaaacagtg agttttcatt
      781 cagaacgata ctgattcaga acttttgtat cattcagagc tctgaatcat tcagtgctaa
      841 atcattcagt tttatcaaac gcatcctcag tgttgtaaca aacggccgag actggcgtcg
      901 caaaggtttt acaatgttac cgttgcaacg gacctaaaaa cggttaaaaa cggtcaacaa
      961 cgtcaaaaag acggtcaaca acggccgaga cggcaaaaaa cgtccgagac ggggtcgaga
     1021 cgaatgttga ccaacattga ctttttaaat atttcaaaca taaatattta aaatataaat
     1081 atttcaaatt aaaggcaaat atctatgttt actttgaaat atttatgttt gtaatgtata
     1141 taaaaagtta acgttggtca gcatccgtct cgaccctatt ttttccgttg tgacgtttta
     1201 aagtccctac cgtctggagc ccataacctt gtcagcacta caatttctct gaaattaagt
     1261 aattaacacg cctgcttctc aatataaata catacacata tatattctct tttcttcgaa
     1321 ttttccagta aaaatatata ctcctatcaa aaatttccaa cagatcatca tttttataac
     1381 tttagtttca gttttccatt agtttggtag tctgttcaaa ttttttctag cgtgtttgca
     1441 gttttgtttt cttatcatgg tatgcaagtt tctctatatt tatcgataca tatgtgtcca
     1501 tttaaagtgt agatatgaaa tgggaatttt agtctaatgc atagccgtaa tatcaagcat
     1561 tacgtttgta gattgtttcg atagatatga aaatgggttt agggtctatc tgacataacc
     1621 ctagtctaac atttattagc acaaaatagt gagttgcaga ttgattgatt tggtcaattt
     1681 tgtatcaatg gagaatgcac aaaggattag tcagataatg tatccacttg atactgacga
     1741 cgacgaagat atcgtagaag cggttcaaga tttgttcaaa gaagttcatg ttggtgatcg
     1801 agttggttct tcttcgactc cgtgtcccaa tccggcacat aaaggtcgta ttgaggacaa
     1861 agtctacgta gctgttggga atgacttgaa agaatgtcgg tcaactctgc tgtgggccct
     1921 acagaattca ggaggtagtc agatatgtat acttcatgtc caccaacctg cagaatcaat
     1981 ccactttggt cgtattgagg acaaagtcta cgtagctgtt gggaatgact tgaaagaatg
     2041 tcggtcaact ctgctgtggg ccctacagaa ttcaggaggt agtcagatat gtatacttca
     2101 tgtccaccaa cctgcagaat caatccactt tgatcacctt caagcatgtc aagtcacagc
     2161 ataccatgat atggatacgg aagatatgca ccagcttctc gataaatata aacagatatg
     2221 tcaggatacg ggggtgtgtg cggaggtgca gtatattgaa acggaatata tcgagaaagg
     2281 tattgttgaa tttgtacttc aacacaatgt cagaaggctt gtcatgggag cagccgcaga
     2341 catgcaaaat tcaagtagaa tggtggaatt aagatccaag aaagccatat atgtgtgttt
     2401 acatgcgact gcttcctgtc aaattcagtt tatacgcaaa ggagaagtta tttttactag
     2461 gaaaggttgg ttgagtgaag cagacgaacc gtttgtcact gattctgaag agagtattcc
     2521 gagttcagca tatgttagtg aaggacatca aattatatta catactgaca acccaactca
     2581 agacgatggt acaacgtcta aattcaacga ggacaatcaa aacgctacat cattcagtct
     2641 cagacaagaa agaagtataa atgatgagct ttatgacctg cttgtacaag ccattgaaga
     2701 tgcagataag tccaaacgag atgcttttga ggagtctatc aggtgtcgga aattacaaaa
     2761 agatgtcata gagactaagc gcaaggtgag tgtatctgaa aagttgtgtg cgaaagaact
     2821 gagaataagg ctagaggttg aagagatgct agaaagaacc gtggaagaac tccaaatgga
     2881 actcgaacaa aagtcatctc tagaaagtca aattgcagat tctgtcgata ttgtaaacga
     2941 gcttgaacat gcagtgttct ctaaggatga acagcttaaa atttataaaa aagaacgtga
     3001 caaattgaag gtagaatgtg atgatgcagt tagactagtc gaggaattaa cagagaaaaa
     3061 tgcaaacgaa gccttaaact tttactctga gtttgagtca tcagaagtta aagacgccat
     3121 tcgtaacttt gaccggtcac ttaagatagg agaagggatt tattatacta catacaaagg
     3181 tttacttcgg cataccaaag tggtcgtaaa ggtgttttac tctcgtaatt ctcaagtcca
     3241 ctcaggatat cagcaggagg tgaatcttgt aagcaaactt aggcacccaa atcttgtaac
     3301 cttcatagga gcctgcccag ataatcggat gataatttac gagtatcttt ctggaggtag
     3361 ccttgaagat cggctcgact gtaaagacga tactccacca ttatcatggc aaaatagaat
     3421 ccacattgca gcagagttat gcatctctct tatttttcta ctttcatgtg gcgttgttca
     3481 tggtaatcta aagccaacta acatccttct agaccggaac tttgttacta aattaagtga
     3541 ctttggaatc catcatgaac tgtcccaaaa cgagatctta agcaataatt acccatccga
     3601 atatatggac cctgtgtatc tttctacagg agagtttact acgaattcag atgcttattc
     3661 tttcggtatt atattattga ggctattaac gggtaaacct gctttgggga taataaatga
     3721 agtgcaatta gcagtagatg atgataattt gaagaatata ttggattcta gtgctggaga
     3781 ctggccattt gtgcaggcac aacaattggc tgttctggca ttgagttgtt gtgatcttgt
     3841 tactacaaat aggcccaatt ttgaaaccgg gatttggagg gtggttgaac cgatacgcgc
     3901 ttcgtgtgga ctttgttcgt ctaagtcagg ttccgaaaga cgacgagata ttccacacta
     3961 ctttgtttgt ccaatctttc aggatactat gggagatccg gtggtggcag ctgatggatt
     4021 tacatatgaa gaagaggcta taaaaggatg gttagacagt ggccataaca cctcacctat
     4081 gaccaacatt aagctagcca acaccaacct tgtcccgaac catgcactac ggtctgccat
     4141 tcaagaatgg ctccagcaac cataaatcgt tttctttgat attcattggt taaatttgta
     4201 tatggaaaac gtcgatgata tcataatttg tatgtgaaac gttgctagta atgttatttg
     4261 atccggata
//
LOCUS       XM_071829635            2786 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X6, mRNA.
ACCESSION   XM_071829635
VERSION     XM_071829635.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2786
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             247..2682
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X5"
                     /protein_id="XP_071685736.1"
                     /db_xref="GeneID:139839549"
                     /translation="MSTNLQNQSTLNAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHV
                     GDRVGSSSTPCPNPAHKGGSSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLK
                     ECRSTLLWALQNSGGSQICILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKY
                     KQICQDTGVCAEVQYIETEYIEKGIVEFVLQHNVRRLVMGAAADMQNSSRMVELRSKK
                     AIYVCLHATASCQIQFIRKGEVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQII
                     LHTDNPTQDDGTTSKFNEDNQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFE
                     ESIRCRKLQKDVIETKRKVSVSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLE
                     SQIADSVDIVNELEHAVFSKDEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALN
                     FYSEFESSEVKDAIRNFDRSLKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQ
                     QEVNLVSKLRHPNLVTFIGACPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHI
                     AAELCISLIFLLSCGVVHGNLKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSE
                     YMDPVYLSTGEFTTNSDAYSFGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSA
                     GDWPFVQAQQLAVLALSCCDLVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRD
                     IPHYFVCPIFQDTMGDPVVAADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNH
                     ALRSAIQEWLQQP"
     misc_feature    520..960
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1162..>1581
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1663..2385
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1663..1674,1681..1683,1687..1689,1720..1722,
                     1726..1728,1813..1815,1855..1866,2002..2004,2014..2019,
                     2023..2025,2053..2058)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2470..2637
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      2786
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtcagataat gtatccactt gatactgacg acgacgaaga tatcgtagaa gcggttcaag
       61 atttgttcaa agaagttcat gttggtgatc gagttggttc ttcttcgact ccgtgtccca
      121 atccggcaca taaaggtcgt attgaggaca aagtctacgt agctgttggg aatgacttga
      181 aagaatgtcg gtcaactctg ctgtgggccc tacagaattc aggaggtagt cagatatgta
      241 tacttcatgt ccaccaacct gcagaatcaa tccactttga atgcacaaag gattagtcag
      301 ataatgtatc cacttgatac tgacgacgac gaagatatcg tagaagcggt tcaagatttg
      361 ttcaaagaag ttcatgttgg tgatcgagtt ggttcttctt cgactccgtg tcccaatccg
      421 gcacataaag gtgggtcctc caatgttata acatacaaga tcgagaatcg agccggaaaa
      481 aaaattgtaa aaaaaatggt aaatggtcgt attgaggaca aagtctacgt agctgttggg
      541 aatgacttga aagaatgtcg gtcaactctg ctgtgggccc tacagaattc aggaggtagt
      601 cagatatgta tacttcatgt ccaccaacct gcagaatcaa tccactttga tcaccttcaa
      661 gcatgtcaag tcacagcata ccatgatatg gatacggaag atatgcacca gcttctcgat
      721 aaatataaac agatatgtca ggatacgggg gtgtgtgcgg aggtgcagta tattgaaacg
      781 gaatatatcg agaaaggtat tgttgaattt gtacttcaac acaatgtcag aaggcttgtc
      841 atgggagcag ccgcagacat gcaaaattca agtagaatgg tggaattaag atccaagaaa
      901 gccatatatg tgtgtttaca tgcgactgct tcctgtcaaa ttcagtttat acgcaaagga
      961 gaagttattt ttactaggaa aggttggttg agtgaagcag acgaaccgtt tgtcactgat
     1021 tctgaagaga gtattccgag ttcagcatat gttagtgaag gacatcaaat tatattacat
     1081 actgacaacc caactcaaga cgatggtaca acgtctaaat tcaacgagga caatcaaaac
     1141 gctacatcat tcagtctcag acaagaaaga agtataaatg atgagcttta tgacctgctt
     1201 gtacaagcca ttgaagatgc agataagtcc aaacgagatg cttttgagga gtctatcagg
     1261 tgtcggaaat tacaaaaaga tgtcatagag actaagcgca aggtgagtgt atctgaaaag
     1321 ttgtgtgcga aagaactgag aataaggcta gaggttgaag agatgctaga aagaaccgtg
     1381 gaagaactcc aaatggaact cgaacaaaag tcatctctag aaagtcaaat tgcagattct
     1441 gtcgatattg taaacgagct tgaacatgca gtgttctcta aggatgaaca gcttaaaatt
     1501 tataaaaaag aacgtgacaa attgaaggta gaatgtgatg atgcagttag actagtcgag
     1561 gaattaacag agaaaaatgc aaacgaagcc ttaaactttt actctgagtt tgagtcatca
     1621 gaagttaaag acgccattcg taactttgac cggtcactta agataggaga agggatttat
     1681 tatactacat acaaaggttt acttcggcat accaaagtgg tcgtaaaggt gttttactct
     1741 cgtaattctc aagtccactc aggatatcag caggaggtga atcttgtaag caaacttagg
     1801 cacccaaatc ttgtaacctt cataggagcc tgcccagata atcggatgat aatttacgag
     1861 tatctttctg gaggtagcct tgaagatcgg ctcgactgta aagacgatac tccaccatta
     1921 tcatggcaaa atagaatcca cattgcagca gagttatgca tctctcttat ttttctactt
     1981 tcatgtggcg ttgttcatgg taatctaaag ccaactaaca tccttctaga ccggaacttt
     2041 gttactaaat taagtgactt tggaatccat catgaactgt cccaaaacga gatcttaagc
     2101 aataattacc catccgaata tatggaccct gtgtatcttt ctacaggaga gtttactacg
     2161 aattcagatg cttattcttt cggtattata ttattgaggc tattaacggg taaacctgct
     2221 ttggggataa taaatgaagt gcaattagca gtagatgatg ataatttgaa gaatatattg
     2281 gattctagtg ctggagactg gccatttgtg caggcacaac aattggctgt tctggcattg
     2341 agttgttgtg atcttgttac tacaaatagg cccaattttg aaaccgggat ttggagggtg
     2401 gttgaaccga tacgcgcttc gtgtggactt tgttcgtcta agtcaggttc cgaaagacga
     2461 cgagatattc cacactactt tgtttgtcca atctttcagg atactatggg agatccggtg
     2521 gtggcagctg atggatttac atatgaagaa gaggctataa aaggatggtt agacagtggc
     2581 cataacacct cacctatgac caacattaag ctagccaaca ccaaccttgt cccgaaccat
     2641 gcactacggt ctgccattca agaatggctc cagcaaccat aaatcgtttt ctttgatatt
     2701 cattggttaa atttgtatat ggaaaacgtc gatgatatca taatttgtat gtgaaacgtt
     2761 gctagtaatg ttatttgatc cggata
//
LOCUS       XM_071829636            2746 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X7, mRNA.
ACCESSION   XM_071829636
VERSION     XM_071829636.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2746
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             207..2642
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X5"
                     /protein_id="XP_071685737.1"
                     /db_xref="GeneID:139839549"
                     /translation="MSTNLQNQSTLNAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHV
                     GDRVGSSSTPCPNPAHKGGSSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLK
                     ECRSTLLWALQNSGGSQICILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKY
                     KQICQDTGVCAEVQYIETEYIEKGIVEFVLQHNVRRLVMGAAADMQNSSRMVELRSKK
                     AIYVCLHATASCQIQFIRKGEVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQII
                     LHTDNPTQDDGTTSKFNEDNQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFE
                     ESIRCRKLQKDVIETKRKVSVSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLE
                     SQIADSVDIVNELEHAVFSKDEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALN
                     FYSEFESSEVKDAIRNFDRSLKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQ
                     QEVNLVSKLRHPNLVTFIGACPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHI
                     AAELCISLIFLLSCGVVHGNLKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSE
                     YMDPVYLSTGEFTTNSDAYSFGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSA
                     GDWPFVQAQQLAVLALSCCDLVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRD
                     IPHYFVCPIFQDTMGDPVVAADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNH
                     ALRSAIQEWLQQP"
     misc_feature    480..920
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1122..>1541
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1623..2345
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1623..1634,1641..1643,1647..1649,1680..1682,
                     1686..1688,1773..1775,1815..1826,1962..1964,1974..1979,
                     1983..1985,2013..2018)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2430..2597
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      2746
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcccaatccg gcacataaag gtgggtcctc caatgttata acatacaaga tcgagaatcg
       61 agccggaaaa aaaattgtaa aaaaaatggt aaatggtcgt attgaggaca aagtctacgt
      121 agctgttggg aatgacttga aagaatgtcg gtcaactctg ctgtgggccc tacagaattc
      181 aggaggtagt cagatatgta tacttcatgt ccaccaacct gcagaatcaa tccactttga
      241 atgcacaaag gattagtcag ataatgtatc cacttgatac tgacgacgac gaagatatcg
      301 tagaagcggt tcaagatttg ttcaaagaag ttcatgttgg tgatcgagtt ggttcttctt
      361 cgactccgtg tcccaatccg gcacataaag gtgggtcctc caatgttata acatacaaga
      421 tcgagaatcg agccggaaaa aaaattgtaa aaaaaatggt aaatggtcgt attgaggaca
      481 aagtctacgt agctgttggg aatgacttga aagaatgtcg gtcaactctg ctgtgggccc
      541 tacagaattc aggaggtagt cagatatgta tacttcatgt ccaccaacct gcagaatcaa
      601 tccactttga tcaccttcaa gcatgtcaag tcacagcata ccatgatatg gatacggaag
      661 atatgcacca gcttctcgat aaatataaac agatatgtca ggatacgggg gtgtgtgcgg
      721 aggtgcagta tattgaaacg gaatatatcg agaaaggtat tgttgaattt gtacttcaac
      781 acaatgtcag aaggcttgtc atgggagcag ccgcagacat gcaaaattca agtagaatgg
      841 tggaattaag atccaagaaa gccatatatg tgtgtttaca tgcgactgct tcctgtcaaa
      901 ttcagtttat acgcaaagga gaagttattt ttactaggaa aggttggttg agtgaagcag
      961 acgaaccgtt tgtcactgat tctgaagaga gtattccgag ttcagcatat gttagtgaag
     1021 gacatcaaat tatattacat actgacaacc caactcaaga cgatggtaca acgtctaaat
     1081 tcaacgagga caatcaaaac gctacatcat tcagtctcag acaagaaaga agtataaatg
     1141 atgagcttta tgacctgctt gtacaagcca ttgaagatgc agataagtcc aaacgagatg
     1201 cttttgagga gtctatcagg tgtcggaaat tacaaaaaga tgtcatagag actaagcgca
     1261 aggtgagtgt atctgaaaag ttgtgtgcga aagaactgag aataaggcta gaggttgaag
     1321 agatgctaga aagaaccgtg gaagaactcc aaatggaact cgaacaaaag tcatctctag
     1381 aaagtcaaat tgcagattct gtcgatattg taaacgagct tgaacatgca gtgttctcta
     1441 aggatgaaca gcttaaaatt tataaaaaag aacgtgacaa attgaaggta gaatgtgatg
     1501 atgcagttag actagtcgag gaattaacag agaaaaatgc aaacgaagcc ttaaactttt
     1561 actctgagtt tgagtcatca gaagttaaag acgccattcg taactttgac cggtcactta
     1621 agataggaga agggatttat tatactacat acaaaggttt acttcggcat accaaagtgg
     1681 tcgtaaaggt gttttactct cgtaattctc aagtccactc aggatatcag caggaggtga
     1741 atcttgtaag caaacttagg cacccaaatc ttgtaacctt cataggagcc tgcccagata
     1801 atcggatgat aatttacgag tatctttctg gaggtagcct tgaagatcgg ctcgactgta
     1861 aagacgatac tccaccatta tcatggcaaa atagaatcca cattgcagca gagttatgca
     1921 tctctcttat ttttctactt tcatgtggcg ttgttcatgg taatctaaag ccaactaaca
     1981 tccttctaga ccggaacttt gttactaaat taagtgactt tggaatccat catgaactgt
     2041 cccaaaacga gatcttaagc aataattacc catccgaata tatggaccct gtgtatcttt
     2101 ctacaggaga gtttactacg aattcagatg cttattcttt cggtattata ttattgaggc
     2161 tattaacggg taaacctgct ttggggataa taaatgaagt gcaattagca gtagatgatg
     2221 ataatttgaa gaatatattg gattctagtg ctggagactg gccatttgtg caggcacaac
     2281 aattggctgt tctggcattg agttgttgtg atcttgttac tacaaatagg cccaattttg
     2341 aaaccgggat ttggagggtg gttgaaccga tacgcgcttc gtgtggactt tgttcgtcta
     2401 agtcaggttc cgaaagacga cgagatattc cacactactt tgtttgtcca atctttcagg
     2461 atactatggg agatccggtg gtggcagctg atggatttac atatgaagaa gaggctataa
     2521 aaggatggtt agacagtggc cataacacct cacctatgac caacattaag ctagccaaca
     2581 ccaaccttgt cccgaaccat gcactacggt ctgccattca agaatggctc cagcaaccat
     2641 aaatcgtttt ctttgatatt cattggttaa atttgtatat ggaaaacgtc gatgatatca
     2701 taatttgtat gtgaaacgtt gctagtaatg ttatttgatc cggata
//
LOCUS       XM_071829637            2733 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X8, mRNA.
ACCESSION   XM_071829637
VERSION     XM_071829637.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2733
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             194..2629
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X5"
                     /protein_id="XP_071685738.1"
                     /db_xref="GeneID:139839549"
                     /translation="MSTNLQNQSTLNAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHV
                     GDRVGSSSTPCPNPAHKGGSSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLK
                     ECRSTLLWALQNSGGSQICILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKY
                     KQICQDTGVCAEVQYIETEYIEKGIVEFVLQHNVRRLVMGAAADMQNSSRMVELRSKK
                     AIYVCLHATASCQIQFIRKGEVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQII
                     LHTDNPTQDDGTTSKFNEDNQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFE
                     ESIRCRKLQKDVIETKRKVSVSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLE
                     SQIADSVDIVNELEHAVFSKDEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALN
                     FYSEFESSEVKDAIRNFDRSLKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQ
                     QEVNLVSKLRHPNLVTFIGACPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHI
                     AAELCISLIFLLSCGVVHGNLKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSE
                     YMDPVYLSTGEFTTNSDAYSFGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSA
                     GDWPFVQAQQLAVLALSCCDLVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRD
                     IPHYFVCPIFQDTMGDPVVAADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNH
                     ALRSAIQEWLQQP"
     misc_feature    467..907
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1109..>1528
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1610..2332
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1610..1621,1628..1630,1634..1636,1667..1669,
                     1673..1675,1760..1762,1802..1813,1949..1951,1961..1966,
                     1970..1972,2000..2005)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2417..2584
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      2733
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttttattct cattatcttc ccacatcttc aaccatctgc aactcgtagg atccttcatc
       61 caagtttgat ttctatcacc aggtcgtatt gaggacaaag tctacgtagc tgttgggaat
      121 gacttgaaag aatgtcggtc aactctgctg tgggccctac agaattcagg aggtagtcag
      181 atatgtatac ttcatgtcca ccaacctgca gaatcaatcc actttgaatg cacaaaggat
      241 tagtcagata atgtatccac ttgatactga cgacgacgaa gatatcgtag aagcggttca
      301 agatttgttc aaagaagttc atgttggtga tcgagttggt tcttcttcga ctccgtgtcc
      361 caatccggca cataaaggtg ggtcctccaa tgttataaca tacaagatcg agaatcgagc
      421 cggaaaaaaa attgtaaaaa aaatggtaaa tggtcgtatt gaggacaaag tctacgtagc
      481 tgttgggaat gacttgaaag aatgtcggtc aactctgctg tgggccctac agaattcagg
      541 aggtagtcag atatgtatac ttcatgtcca ccaacctgca gaatcaatcc actttgatca
      601 ccttcaagca tgtcaagtca cagcatacca tgatatggat acggaagata tgcaccagct
      661 tctcgataaa tataaacaga tatgtcagga tacgggggtg tgtgcggagg tgcagtatat
      721 tgaaacggaa tatatcgaga aaggtattgt tgaatttgta cttcaacaca atgtcagaag
      781 gcttgtcatg ggagcagccg cagacatgca aaattcaagt agaatggtgg aattaagatc
      841 caagaaagcc atatatgtgt gtttacatgc gactgcttcc tgtcaaattc agtttatacg
      901 caaaggagaa gttattttta ctaggaaagg ttggttgagt gaagcagacg aaccgtttgt
      961 cactgattct gaagagagta ttccgagttc agcatatgtt agtgaaggac atcaaattat
     1021 attacatact gacaacccaa ctcaagacga tggtacaacg tctaaattca acgaggacaa
     1081 tcaaaacgct acatcattca gtctcagaca agaaagaagt ataaatgatg agctttatga
     1141 cctgcttgta caagccattg aagatgcaga taagtccaaa cgagatgctt ttgaggagtc
     1201 tatcaggtgt cggaaattac aaaaagatgt catagagact aagcgcaagg tgagtgtatc
     1261 tgaaaagttg tgtgcgaaag aactgagaat aaggctagag gttgaagaga tgctagaaag
     1321 aaccgtggaa gaactccaaa tggaactcga acaaaagtca tctctagaaa gtcaaattgc
     1381 agattctgtc gatattgtaa acgagcttga acatgcagtg ttctctaagg atgaacagct
     1441 taaaatttat aaaaaagaac gtgacaaatt gaaggtagaa tgtgatgatg cagttagact
     1501 agtcgaggaa ttaacagaga aaaatgcaaa cgaagcctta aacttttact ctgagtttga
     1561 gtcatcagaa gttaaagacg ccattcgtaa ctttgaccgg tcacttaaga taggagaagg
     1621 gatttattat actacataca aaggtttact tcggcatacc aaagtggtcg taaaggtgtt
     1681 ttactctcgt aattctcaag tccactcagg atatcagcag gaggtgaatc ttgtaagcaa
     1741 acttaggcac ccaaatcttg taaccttcat aggagcctgc ccagataatc ggatgataat
     1801 ttacgagtat ctttctggag gtagccttga agatcggctc gactgtaaag acgatactcc
     1861 accattatca tggcaaaata gaatccacat tgcagcagag ttatgcatct ctcttatttt
     1921 tctactttca tgtggcgttg ttcatggtaa tctaaagcca actaacatcc ttctagaccg
     1981 gaactttgtt actaaattaa gtgactttgg aatccatcat gaactgtccc aaaacgagat
     2041 cttaagcaat aattacccat ccgaatatat ggaccctgtg tatctttcta caggagagtt
     2101 tactacgaat tcagatgctt attctttcgg tattatatta ttgaggctat taacgggtaa
     2161 acctgctttg gggataataa atgaagtgca attagcagta gatgatgata atttgaagaa
     2221 tatattggat tctagtgctg gagactggcc atttgtgcag gcacaacaat tggctgttct
     2281 ggcattgagt tgttgtgatc ttgttactac aaataggccc aattttgaaa ccgggatttg
     2341 gagggtggtt gaaccgatac gcgcttcgtg tggactttgt tcgtctaagt caggttccga
     2401 aagacgacga gatattccac actactttgt ttgtccaatc tttcaggata ctatgggaga
     2461 tccggtggtg gcagctgatg gatttacata tgaagaagag gctataaaag gatggttaga
     2521 cagtggccat aacacctcac ctatgaccaa cattaagcta gccaacacca accttgtccc
     2581 gaaccatgca ctacggtctg ccattcaaga atggctccag caaccataaa tcgttttctt
     2641 tgatattcat tggttaaatt tgtatatgga aaacgtcgat gatatcataa tttgtatgtg
     2701 aaacgttgct agtaatgtta tttgatccgg ata
//
LOCUS       XM_071829638            3881 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X9, mRNA.
ACCESSION   XM_071829638
VERSION     XM_071829638.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3881
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3881
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             1369..3777
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X6"
                     /protein_id="XP_071685739.1"
                     /db_xref="GeneID:139839549"
                     /translation="MENAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSST
                     PCPNPAHKGGSSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLKECRSTLLWA
                     LQNSGGSQICILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKYKQICQDTGV
                     CAEVQYIETEYIEKGIVEFVLQHNVRRLVMGAAADMQNSSRMVELRSKKAIYVCLHAT
                     ASCQIQFIRKGEVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQIILHTDNPTQD
                     DGTTSKFNEDNQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQ
                     KDVIETKRKVSVSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDI
                     VNELEHAVFSKDEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALNFYSEFESSE
                     VKDAIRNFDRSLKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQQEVNLVSKL
                     RHPNLVTFIGACPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHIAAELCISLI
                     FLLSCGVVHGNLKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSEYMDPVYLST
                     GEFTTNSDAYSFGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSAGDWPFVQAQ
                     QLAVLALSCCDLVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRDIPHYFVCPI
                     FQDTMGDPVVAADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNHALRSAIQEW
                     LQQP"
     misc_feature    1615..2055
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    2257..>2676
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    2758..3480
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2758..2769,2776..2778,2782..2784,2815..2817,
                     2821..2823,2908..2910,2950..2961,3097..3099,3109..3114,
                     3118..3120,3148..3153)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3565..3732
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      3881
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttctgaaccg ttcaaattta aagacctctc cataccattc agtggctaca tatttccctc
       61 agtacccttt tattctcatt atcttcccac atcttcaacc atctgcaact cgtaggatcc
      121 ttcatccaag tttgatttct atcaccagca aggttgcaat ttggtgggga ttctatgtaa
      181 aagtgcttta attttttgtg ggtattgttg ttttttgtga gatctggatc ggtcaattag
      241 agttacacat aaattatagg gtaatttcat gtttggaaat tttagtgggt attgttgttt
      301 tttattttta ttttgttatg aatgtttaga tatttatatt attgttgttt ttttaagtat
      361 aatttttgta aaggtataga tattgatata aggttaatat ggtaatttta tatcattcag
      421 agtgttgatt cagaactctt atcaaacagt gagttttcat tcagaacgat actgattcag
      481 aacttttgta tcattcagag ctctgaatca ttcagtgcta aatcattcag ttttatcaaa
      541 cgcatcctca gtgttgtaac aaacggccga gacgggcgtc gcaaaggttt tacaatgtta
      601 ccgttgcaac ggacctaaaa acggttaaaa acggtcaaca acgtcaaaaa gacggtcaac
      661 aacgtccgag acggcaaaaa acgtccgaga cggggtcgag acgaatgttg accaacattg
      721 actttttaaa tatttcaaac ataaatattt aaaatataaa tatttcaaat taaaggcaaa
      781 tatctatgtt tactttgaaa tatttatgtt tgtaatgtat ataaaaagtt aacgttggtc
      841 agcatccgtc tcgaccctat tttttccgtt gtgacgtttt aaagtcccta ccgtctggag
      901 cccataacct tgtcagcact acaatttctc tgaaattaag taattaacac gcctgcttct
      961 caatataaat acatacacat atatattctc ttttcttcga attttccagt aaaaatatat
     1021 actcctatca aaaatttcca acagatcatc atttttataa ctttagtttc agttttccat
     1081 tagtttggta gtctgttcaa attttttcta gcgtgtttgc agttttgttt tcttatcatg
     1141 gtatgcaagt ttctctatat ttatcgatac atatgtgtcc atttaaagtg tagatatgaa
     1201 atgggaattt tagtctaatg catagccgta atatcaagca ttacgtttgt agattgtttc
     1261 gatagatatg aaaatgggtt tagggtctat ctgacataac cctagtctaa catttattag
     1321 cacaaaatag tgagttgcag attgattgat ttggtcaatt ttgtatcaat ggagaatgca
     1381 caaaggatta gtcagataat gtatccactt gatactgacg acgacgaaga tatcgtagaa
     1441 gcggttcaag atttgttcaa agaagttcat gttggtgatc gagttggttc ttcttcgact
     1501 ccgtgtccca atccggcaca taaaggtggg tcctccaatg ttataacata caagatcgag
     1561 aatcgagccg gaaaaaaaat tgtaaaaaaa atggtaaatg gtcgtattga ggacaaagtc
     1621 tacgtagctg ttgggaatga cttgaaagaa tgtcggtcaa ctctgctgtg ggccctacag
     1681 aattcaggag gtagtcagat atgtatactt catgtccacc aacctgcaga atcaatccac
     1741 tttgatcacc ttcaagcatg tcaagtcaca gcataccatg atatggatac ggaagatatg
     1801 caccagcttc tcgataaata taaacagata tgtcaggata cgggggtgtg tgcggaggtg
     1861 cagtatattg aaacggaata tatcgagaaa ggtattgttg aatttgtact tcaacacaat
     1921 gtcagaaggc ttgtcatggg agcagccgca gacatgcaaa attcaagtag aatggtggaa
     1981 ttaagatcca agaaagccat atatgtgtgt ttacatgcga ctgcttcctg tcaaattcag
     2041 tttatacgca aaggagaagt tatttttact aggaaaggtt ggttgagtga agcagacgaa
     2101 ccgtttgtca ctgattctga agagagtatt ccgagttcag catatgttag tgaaggacat
     2161 caaattatat tacatactga caacccaact caagacgatg gtacaacgtc taaattcaac
     2221 gaggacaatc aaaacgctac atcattcagt ctcagacaag aaagaagtat aaatgatgag
     2281 ctttatgacc tgcttgtaca agccattgaa gatgcagata agtccaaacg agatgctttt
     2341 gaggagtcta tcaggtgtcg gaaattacaa aaagatgtca tagagactaa gcgcaaggtg
     2401 agtgtatctg aaaagttgtg tgcgaaagaa ctgagaataa ggctagaggt tgaagagatg
     2461 ctagaaagaa ccgtggaaga actccaaatg gaactcgaac aaaagtcatc tctagaaagt
     2521 caaattgcag attctgtcga tattgtaaac gagcttgaac atgcagtgtt ctctaaggat
     2581 gaacagctta aaatttataa aaaagaacgt gacaaattga aggtagaatg tgatgatgca
     2641 gttagactag tcgaggaatt aacagagaaa aatgcaaacg aagccttaaa cttttactct
     2701 gagtttgagt catcagaagt taaagacgcc attcgtaact ttgaccggtc acttaagata
     2761 ggagaaggga tttattatac tacatacaaa ggtttacttc ggcataccaa agtggtcgta
     2821 aaggtgtttt actctcgtaa ttctcaagtc cactcaggat atcagcagga ggtgaatctt
     2881 gtaagcaaac ttaggcaccc aaatcttgta accttcatag gagcctgccc agataatcgg
     2941 atgataattt acgagtatct ttctggaggt agccttgaag atcggctcga ctgtaaagac
     3001 gatactccac cattatcatg gcaaaataga atccacattg cagcagagtt atgcatctct
     3061 cttatttttc tactttcatg tggcgttgtt catggtaatc taaagccaac taacatcctt
     3121 ctagaccgga actttgttac taaattaagt gactttggaa tccatcatga actgtcccaa
     3181 aacgagatct taagcaataa ttacccatcc gaatatatgg accctgtgta tctttctaca
     3241 ggagagttta ctacgaattc agatgcttat tctttcggta ttatattatt gaggctatta
     3301 acgggtaaac ctgctttggg gataataaat gaagtgcaat tagcagtaga tgatgataat
     3361 ttgaagaata tattggattc tagtgctgga gactggccat ttgtgcaggc acaacaattg
     3421 gctgttctgg cattgagttg ttgtgatctt gttactacaa ataggcccaa ttttgaaacc
     3481 gggatttgga gggtggttga accgatacgc gcttcgtgtg gactttgttc gtctaagtca
     3541 ggttccgaaa gacgacgaga tattccacac tactttgttt gtccaatctt tcaggatact
     3601 atgggagatc cggtggtggc agctgatgga tttacatatg aagaagaggc tataaaagga
     3661 tggttagaca gtggccataa cacctcacct atgaccaaca ttaagctagc caacaccaac
     3721 cttgtcccga accatgcact acggtctgcc attcaagaat ggctccagca accataaatc
     3781 gttttctttg atattcattg gttaaatttg tatatggaaa acgtcgatga tatcataatt
     3841 tgtatgtgaa acgttgctag taatgttatt tgatccggat a
//
LOCUS       XM_071829639            2684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X10, mRNA.
ACCESSION   XM_071829639
VERSION     XM_071829639.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2684
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             172..2580
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X6"
                     /protein_id="XP_071685740.1"
                     /db_xref="GeneID:139839549"
                     /translation="MENAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSST
                     PCPNPAHKGGSSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLKECRSTLLWA
                     LQNSGGSQICILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKYKQICQDTGV
                     CAEVQYIETEYIEKGIVEFVLQHNVRRLVMGAAADMQNSSRMVELRSKKAIYVCLHAT
                     ASCQIQFIRKGEVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQIILHTDNPTQD
                     DGTTSKFNEDNQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQ
                     KDVIETKRKVSVSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDI
                     VNELEHAVFSKDEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALNFYSEFESSE
                     VKDAIRNFDRSLKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQQEVNLVSKL
                     RHPNLVTFIGACPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHIAAELCISLI
                     FLLSCGVVHGNLKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSEYMDPVYLST
                     GEFTTNSDAYSFGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSAGDWPFVQAQ
                     QLAVLALSCCDLVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRDIPHYFVCPI
                     FQDTMGDPVVAADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNHALRSAIQEW
                     LQQP"
     misc_feature    418..858
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1060..>1479
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1561..2283
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1561..1572,1579..1581,1585..1587,1618..1620,
                     1624..1626,1711..1713,1753..1764,1900..1902,1912..1917,
                     1921..1923,1951..1956)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2368..2535
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      2684
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atttaaagac ctctccatac cattcagtgg ctacatattt ccctcagtac ccttttattc
       61 tcattatctt cccacatctt caaccatctg caactcgtag gatccttcat ccaagtttga
      121 tttctatcac cagtgagttg cagattgatt gatttggtca attttgtatc aatggagaat
      181 gcacaaagga ttagtcagat aatgtatcca cttgatactg acgacgacga agatatcgta
      241 gaagcggttc aagatttgtt caaagaagtt catgttggtg atcgagttgg ttcttcttcg
      301 actccgtgtc ccaatccggc acataaaggt gggtcctcca atgttataac atacaagatc
      361 gagaatcgag ccggaaaaaa aattgtaaaa aaaatggtaa atggtcgtat tgaggacaaa
      421 gtctacgtag ctgttgggaa tgacttgaaa gaatgtcggt caactctgct gtgggcccta
      481 cagaattcag gaggtagtca gatatgtata cttcatgtcc accaacctgc agaatcaatc
      541 cactttgatc accttcaagc atgtcaagtc acagcatacc atgatatgga tacggaagat
      601 atgcaccagc ttctcgataa atataaacag atatgtcagg atacgggggt gtgtgcggag
      661 gtgcagtata ttgaaacgga atatatcgag aaaggtattg ttgaatttgt acttcaacac
      721 aatgtcagaa ggcttgtcat gggagcagcc gcagacatgc aaaattcaag tagaatggtg
      781 gaattaagat ccaagaaagc catatatgtg tgtttacatg cgactgcttc ctgtcaaatt
      841 cagtttatac gcaaaggaga agttattttt actaggaaag gttggttgag tgaagcagac
      901 gaaccgtttg tcactgattc tgaagagagt attccgagtt cagcatatgt tagtgaagga
      961 catcaaatta tattacatac tgacaaccca actcaagacg atggtacaac gtctaaattc
     1021 aacgaggaca atcaaaacgc tacatcattc agtctcagac aagaaagaag tataaatgat
     1081 gagctttatg acctgcttgt acaagccatt gaagatgcag ataagtccaa acgagatgct
     1141 tttgaggagt ctatcaggtg tcggaaatta caaaaagatg tcatagagac taagcgcaag
     1201 gtgagtgtat ctgaaaagtt gtgtgcgaaa gaactgagaa taaggctaga ggttgaagag
     1261 atgctagaaa gaaccgtgga agaactccaa atggaactcg aacaaaagtc atctctagaa
     1321 agtcaaattg cagattctgt cgatattgta aacgagcttg aacatgcagt gttctctaag
     1381 gatgaacagc ttaaaattta taaaaaagaa cgtgacaaat tgaaggtaga atgtgatgat
     1441 gcagttagac tagtcgagga attaacagag aaaaatgcaa acgaagcctt aaacttttac
     1501 tctgagtttg agtcatcaga agttaaagac gccattcgta actttgaccg gtcacttaag
     1561 ataggagaag ggatttatta tactacatac aaaggtttac ttcggcatac caaagtggtc
     1621 gtaaaggtgt tttactctcg taattctcaa gtccactcag gatatcagca ggaggtgaat
     1681 cttgtaagca aacttaggca cccaaatctt gtaaccttca taggagcctg cccagataat
     1741 cggatgataa tttacgagta tctttctgga ggtagccttg aagatcggct cgactgtaaa
     1801 gacgatactc caccattatc atggcaaaat agaatccaca ttgcagcaga gttatgcatc
     1861 tctcttattt ttctactttc atgtggcgtt gttcatggta atctaaagcc aactaacatc
     1921 cttctagacc ggaactttgt tactaaatta agtgactttg gaatccatca tgaactgtcc
     1981 caaaacgaga tcttaagcaa taattaccca tccgaatata tggaccctgt gtatctttct
     2041 acaggagagt ttactacgaa ttcagatgct tattctttcg gtattatatt attgaggcta
     2101 ttaacgggta aacctgcttt ggggataata aatgaagtgc aattagcagt agatgatgat
     2161 aatttgaaga atatattgga ttctagtgct ggagactggc catttgtgca ggcacaacaa
     2221 ttggctgttc tggcattgag ttgttgtgat cttgttacta caaataggcc caattttgaa
     2281 accgggattt ggagggtggt tgaaccgata cgcgcttcgt gtggactttg ttcgtctaag
     2341 tcaggttccg aaagacgacg agatattcca cactactttg tttgtccaat ctttcaggat
     2401 actatgggag atccggtggt ggcagctgat ggatttacat atgaagaaga ggctataaaa
     2461 ggatggttag acagtggcca taacacctca cctatgacca acattaagct agccaacacc
     2521 aaccttgtcc cgaaccatgc actacggtct gccattcaag aatggctcca gcaaccataa
     2581 atcgttttct ttgatattca ttggttaaat ttgtatatgg aaaacgtcga tgatatcata
     2641 atttgtatgt gaaacgttgc tagtaatgtt atttgatccg gata
//
LOCUS       XM_071829640            2639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X11, mRNA.
ACCESSION   XM_071829640
VERSION     XM_071829640.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2639
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             157..2535
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X7"
                     /protein_id="XP_071685741.1"
                     /db_xref="GeneID:139839549"
                     /translation="MYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSSTPCPNPAHKGG
                     SSNVITYKIENRAGKKIVKKMVNGRIEDKVYVAVGNDLKECRSTLLWALQNSGGSQIC
                     ILHVHQPAESIHFDHLQACQVTAYHDMDTEDMHQLLDKYKQICQDTGVCAEVQYIETE
                     YIEKGIVEFVLQHNVRRLVMGAAADMQNSSRMVELRSKKAIYVCLHATASCQIQFIRK
                     GEVIFTRKGWLSEADEPFVTDSEESIPSSAYVSEGHQIILHTDNPTQDDGTTSKFNED
                     NQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQKDVIETKRKV
                     SVSEKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDIVNELEHAVFS
                     KDEQLKIYKKERDKLKVECDDAVRLVEELTEKNANEALNFYSEFESSEVKDAIRNFDR
                     SLKIGEGIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQQEVNLVSKLRHPNLVTFIG
                     ACPDNRMIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHIAAELCISLIFLLSCGVVHG
                     NLKPTNILLDRNFVTKLSDFGIHHELSQNEILSNNYPSEYMDPVYLSTGEFTTNSDAY
                     SFGIILLRLLTGKPALGIINEVQLAVDDDNLKNILDSSAGDWPFVQAQQLAVLALSCC
                     DLVTTNRPNFETGIWRVVEPIRASCGLCSSKSGSERRRDIPHYFVCPIFQDTMGDPVV
                     AADGFTYEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNHALRSAIQEWLQQP"
     misc_feature    373..813
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1015..>1434
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1516..2238
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1516..1527,1534..1536,1540..1542,1573..1575,
                     1579..1581,1666..1668,1708..1719,1855..1857,1867..1872,
                     1876..1878,1906..1911)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2323..2490
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      2639
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttaaagacc tctccatacc attcagtggc tacatatttc cctcagtacc cttttattct
       61 cattatcttc ccacatcttc aaccatctgc aactcgtagg atccttcatc caagtttgat
      121 ttctatcacc agaatgcaca aaggattagt cagataatgt atccacttga tactgacgac
      181 gacgaagata tcgtagaagc ggttcaagat ttgttcaaag aagttcatgt tggtgatcga
      241 gttggttctt cttcgactcc gtgtcccaat ccggcacata aaggtgggtc ctccaatgtt
      301 ataacataca agatcgagaa tcgagccgga aaaaaaattg taaaaaaaat ggtaaatggt
      361 cgtattgagg acaaagtcta cgtagctgtt gggaatgact tgaaagaatg tcggtcaact
      421 ctgctgtggg ccctacagaa ttcaggaggt agtcagatat gtatacttca tgtccaccaa
      481 cctgcagaat caatccactt tgatcacctt caagcatgtc aagtcacagc ataccatgat
      541 atggatacgg aagatatgca ccagcttctc gataaatata aacagatatg tcaggatacg
      601 ggggtgtgtg cggaggtgca gtatattgaa acggaatata tcgagaaagg tattgttgaa
      661 tttgtacttc aacacaatgt cagaaggctt gtcatgggag cagccgcaga catgcaaaat
      721 tcaagtagaa tggtggaatt aagatccaag aaagccatat atgtgtgttt acatgcgact
      781 gcttcctgtc aaattcagtt tatacgcaaa ggagaagtta tttttactag gaaaggttgg
      841 ttgagtgaag cagacgaacc gtttgtcact gattctgaag agagtattcc gagttcagca
      901 tatgttagtg aaggacatca aattatatta catactgaca acccaactca agacgatggt
      961 acaacgtcta aattcaacga ggacaatcaa aacgctacat cattcagtct cagacaagaa
     1021 agaagtataa atgatgagct ttatgacctg cttgtacaag ccattgaaga tgcagataag
     1081 tccaaacgag atgcttttga ggagtctatc aggtgtcgga aattacaaaa agatgtcata
     1141 gagactaagc gcaaggtgag tgtatctgaa aagttgtgtg cgaaagaact gagaataagg
     1201 ctagaggttg aagagatgct agaaagaacc gtggaagaac tccaaatgga actcgaacaa
     1261 aagtcatctc tagaaagtca aattgcagat tctgtcgata ttgtaaacga gcttgaacat
     1321 gcagtgttct ctaaggatga acagcttaaa atttataaaa aagaacgtga caaattgaag
     1381 gtagaatgtg atgatgcagt tagactagtc gaggaattaa cagagaaaaa tgcaaacgaa
     1441 gccttaaact tttactctga gtttgagtca tcagaagtta aagacgccat tcgtaacttt
     1501 gaccggtcac ttaagatagg agaagggatt tattatacta catacaaagg tttacttcgg
     1561 cataccaaag tggtcgtaaa ggtgttttac tctcgtaatt ctcaagtcca ctcaggatat
     1621 cagcaggagg tgaatcttgt aagcaaactt aggcacccaa atcttgtaac cttcatagga
     1681 gcctgcccag ataatcggat gataatttac gagtatcttt ctggaggtag ccttgaagat
     1741 cggctcgact gtaaagacga tactccacca ttatcatggc aaaatagaat ccacattgca
     1801 gcagagttat gcatctctct tatttttcta ctttcatgtg gcgttgttca tggtaatcta
     1861 aagccaacta acatccttct agaccggaac tttgttacta aattaagtga ctttggaatc
     1921 catcatgaac tgtcccaaaa cgagatctta agcaataatt acccatccga atatatggac
     1981 cctgtgtatc tttctacagg agagtttact acgaattcag atgcttattc tttcggtatt
     2041 atattattga ggctattaac gggtaaacct gctttgggga taataaatga agtgcaatta
     2101 gcagtagatg atgataattt gaagaatata ttggattcta gtgctggaga ctggccattt
     2161 gtgcaggcac aacaattggc tgttctggca ttgagttgtt gtgatcttgt tactacaaat
     2221 aggcccaatt ttgaaaccgg gatttggagg gtggttgaac cgatacgcgc ttcgtgtgga
     2281 ctttgttcgt ctaagtcagg ttccgaaaga cgacgagata ttccacacta ctttgtttgt
     2341 ccaatctttc aggatactat gggagatccg gtggtggcag ctgatggatt tacatatgaa
     2401 gaagaggcta taaaaggatg gttagacagt ggccataaca cctcacctat gaccaacatt
     2461 aagctagcca acaccaacct tgtcccgaac catgcactac ggtctgccat tcaagaatgg
     2521 ctccagcaac cataaatcgt tttctttgat attcattggt taaatttgta tatggaaaac
     2581 gtcgatgata tcataatttg tatgtgaaac gttgctagta atgttatttg atccggata
//
LOCUS       XM_071829641            2711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X12, mRNA.
ACCESSION   XM_071829641
VERSION     XM_071829641.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2711
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             247..2607
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X8"
                     /protein_id="XP_071685742.1"
                     /db_xref="GeneID:139839549"
                     /translation="MSTNLQNQSTLNAQRISQIMYPLDTDDDEDIVEAVQDLFKEVHV
                     GDRVGSSSTPCPNPAHKGRIEDKVYVAVGNDLKECRSTLLWALQNSGGSQICILHVHQ
                     PAESIHFDHLQACQVTAYHDMDTEDMHQLLDKYKQICQDTGVCAEVQYIETEYIEKGI
                     VEFVLQHNVRRLVMGAAADMQNSSRMVELRSKKAIYVCLHATASCQIQFIRKGEVIFT
                     RKGWLSEADEPFVTDSEESIPSSAYVSEGHQIILHTDNPTQDDGTTSKFNEDNQNATS
                     FSLRQERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQKDVIETKRKVSVSEKL
                     CAKELRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDIVNELEHAVFSKDEQLK
                     IYKKERDKLKVECDDAVRLVEELTEKNANEALNFYSEFESSEVKDAIRNFDRSLKIGE
                     GIYYTTYKGLLRHTKVVVKVFYSRNSQVHSGYQQEVNLVSKLRHPNLVTFIGACPDNR
                     MIIYEYLSGGSLEDRLDCKDDTPPLSWQNRIHIAAELCISLIFLLSCGVVHGNLKPTN
                     ILLDRNFVTKLSDFGIHHELSQNEILSNNYPSEYMDPVYLSTGEFTTNSDAYSFGIIL
                     LRLLTGKPALGIINEVQLAVDDDNLKNILDSSAGDWPFVQAQQLAVLALSCCDLVTTN
                     RPNFETGIWRVVEPIRASCGLCSSKSGSERRRDIPHYFVCPIFQDTMGDPVVAADGFT
                     YEEEAIKGWLDSGHNTSPMTNIKLANTNLVPNHALRSAIQEWLQQP"
     misc_feature    445..885
                     /gene="LOC139839549"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1087..>1506
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1588..2310
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1588..1599,1606..1608,1612..1614,1645..1647,
                     1651..1653,1738..1740,1780..1791,1927..1929,1939..1944,
                     1948..1950,1978..1983)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2395..2562
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      2711
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtcagataat gtatccactt gatactgacg acgacgaaga tatcgtagaa gcggttcaag
       61 atttgttcaa agaagttcat gttggtgatc gagttggttc ttcttcgact ccgtgtccca
      121 atccggcaca taaaggtcgt attgaggaca aagtctacgt agctgttggg aatgacttga
      181 aagaatgtcg gtcaactctg ctgtgggccc tacagaattc aggaggtagt cagatatgta
      241 tacttcatgt ccaccaacct gcagaatcaa tccactttga atgcacaaag gattagtcag
      301 ataatgtatc cacttgatac tgacgacgac gaagatatcg tagaagcggt tcaagatttg
      361 ttcaaagaag ttcatgttgg tgatcgagtt ggttcttctt cgactccgtg tcccaatccg
      421 gcacataaag gtcgtattga ggacaaagtc tacgtagctg ttgggaatga cttgaaagaa
      481 tgtcggtcaa ctctgctgtg ggccctacag aattcaggag gtagtcagat atgtatactt
      541 catgtccacc aacctgcaga atcaatccac tttgatcacc ttcaagcatg tcaagtcaca
      601 gcataccatg atatggatac ggaagatatg caccagcttc tcgataaata taaacagata
      661 tgtcaggata cgggggtgtg tgcggaggtg cagtatattg aaacggaata tatcgagaaa
      721 ggtattgttg aatttgtact tcaacacaat gtcagaaggc ttgtcatggg agcagccgca
      781 gacatgcaaa attcaagtag aatggtggaa ttaagatcca agaaagccat atatgtgtgt
      841 ttacatgcga ctgcttcctg tcaaattcag tttatacgca aaggagaagt tatttttact
      901 aggaaaggtt ggttgagtga agcagacgaa ccgtttgtca ctgattctga agagagtatt
      961 ccgagttcag catatgttag tgaaggacat caaattatat tacatactga caacccaact
     1021 caagacgatg gtacaacgtc taaattcaac gaggacaatc aaaacgctac atcattcagt
     1081 ctcagacaag aaagaagtat aaatgatgag ctttatgacc tgcttgtaca agccattgaa
     1141 gatgcagata agtccaaacg agatgctttt gaggagtcta tcaggtgtcg gaaattacaa
     1201 aaagatgtca tagagactaa gcgcaaggtg agtgtatctg aaaagttgtg tgcgaaagaa
     1261 ctgagaataa ggctagaggt tgaagagatg ctagaaagaa ccgtggaaga actccaaatg
     1321 gaactcgaac aaaagtcatc tctagaaagt caaattgcag attctgtcga tattgtaaac
     1381 gagcttgaac atgcagtgtt ctctaaggat gaacagctta aaatttataa aaaagaacgt
     1441 gacaaattga aggtagaatg tgatgatgca gttagactag tcgaggaatt aacagagaaa
     1501 aatgcaaacg aagccttaaa cttttactct gagtttgagt catcagaagt taaagacgcc
     1561 attcgtaact ttgaccggtc acttaagata ggagaaggga tttattatac tacatacaaa
     1621 ggtttacttc ggcataccaa agtggtcgta aaggtgtttt actctcgtaa ttctcaagtc
     1681 cactcaggat atcagcagga ggtgaatctt gtaagcaaac ttaggcaccc aaatcttgta
     1741 accttcatag gagcctgccc agataatcgg atgataattt acgagtatct ttctggaggt
     1801 agccttgaag atcggctcga ctgtaaagac gatactccac cattatcatg gcaaaataga
     1861 atccacattg cagcagagtt atgcatctct cttatttttc tactttcatg tggcgttgtt
     1921 catggtaatc taaagccaac taacatcctt ctagaccgga actttgttac taaattaagt
     1981 gactttggaa tccatcatga actgtcccaa aacgagatct taagcaataa ttacccatcc
     2041 gaatatatgg accctgtgta tctttctaca ggagagttta ctacgaattc agatgcttat
     2101 tctttcggta ttatattatt gaggctatta acgggtaaac ctgctttggg gataataaat
     2161 gaagtgcaat tagcagtaga tgatgataat ttgaagaata tattggattc tagtgctgga
     2221 gactggccat ttgtgcaggc acaacaattg gctgttctgg cattgagttg ttgtgatctt
     2281 gttactacaa ataggcccaa ttttgaaacc gggatttgga gggtggttga accgatacgc
     2341 gcttcgtgtg gactttgttc gtctaagtca ggttccgaaa gacgacgaga tattccacac
     2401 tactttgttt gtccaatctt tcaggatact atgggagatc cggtggtggc agctgatgga
     2461 tttacatatg aagaagaggc tataaaagga tggttagaca gtggccataa cacctcacct
     2521 atgaccaaca ttaagctagc caacaccaac cttgtcccga accatgcact acggtctgcc
     2581 attcaagaat ggctccagca accataaatc gttttctttg atattcattg gttaaatttg
     2641 tatatggaaa acgtcgatga tatcataatt tgtatgtgaa acgttgctag taatgttatt
     2701 tgatccggat a
//
LOCUS       XM_071829642            3030 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839549), transcript variant X13, mRNA.
ACCESSION   XM_071829642
VERSION     XM_071829642.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3030
                     /gene="LOC139839549"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839549"
     CDS             800..2926
                     /gene="LOC139839549"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X9"
                     /protein_id="XP_071685743.1"
                     /db_xref="GeneID:139839549"
                     /translation="MCSIAYSLVLGSHLIPGSIEDYIRDSLLHHYDHLQACQVTAYHD
                     MDTEDMHQLLDKYKQICQDTGVCAEVQYIETEYIEKGIVEFVLQHNVRRLVMGAAADM
                     QNSSRMVELRSKKAIYVCLHATASCQIQFIRKGEVIFTRKGWLSEADEPFVTDSEESI
                     PSSAYVSEGHQIILHTDNPTQDDGTTSKFNEDNQNATSFSLRQERSINDELYDLLVQA
                     IEDADKSKRDAFEESIRCRKLQKDVIETKRKVSVSEKLCAKELRIRLEVEEMLERTVE
                     ELQMELEQKSSLESQIADSVDIVNELEHAVFSKDEQLKIYKKERDKLKVECDDAVRLV
                     EELTEKNANEALNFYSEFESSEVKDAIRNFDRSLKIGEGIYYTTYKGLLRHTKVVVKV
                     FYSRNSQVHSGYQQEVNLVSKLRHPNLVTFIGACPDNRMIIYEYLSGGSLEDRLDCKD
                     DTPPLSWQNRIHIAAELCISLIFLLSCGVVHGNLKPTNILLDRNFVTKLSDFGIHHEL
                     SQNEILSNNYPSEYMDPVYLSTGEFTTNSDAYSFGIILLRLLTGKPALGIINEVQLAV
                     DDDNLKNILDSSAGDWPFVQAQQLAVLALSCCDLVTTNRPNFETGIWRVVEPIRASCG
                     LCSSKSGSERRRDIPHYFVCPIFQDTMGDPVVAADGFTYEEEAIKGWLDSGHNTSPMT
                     NIKLANTNLVPNHALRSAIQEWLQQP"
     misc_feature    <884..1204
                     /gene="LOC139839549"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; Region: AANH_superfamily; cl00292"
                     /db_xref="CDD:469708"
     misc_feature    1406..>1825
                     /gene="LOC139839549"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1907..2629
                     /gene="LOC139839549"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1907..1918,1925..1927,1931..1933,1964..1966,
                     1970..1972,2057..2059,2099..2110,2246..2248,2258..2263,
                     2267..2269,2297..2302)
                     /gene="LOC139839549"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2714..2881
                     /gene="LOC139839549"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
     polyA_site      3030
                     /gene="LOC139839549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgtcctact tggtacgtat acctcttacg cgtgccattt cattatccat catatcacga
       61 tgaggtactg ttagaggagg aagtcttgaa ctttcaaaac acgttcatta ttttgaatgt
      121 gaaatcctac atgaacattc agttcatacg taggtcactt gtacaaaaac gggtgtcaac
      181 cgtatgaacg gtgattggat cgtgtggtcg aagccgggcc atacgctaga tcgaaaactt
      241 tatagggcgg tcttcattgt ttctcctaac aaggacaatg tatgcgctcg accacctttt
      301 atgaccatac aggatgaatc cactccatcc taaagggagt caagtctccc gaacgacaca
      361 cttgctgatt tgtttcagaa gttgtagtcc agaccagttg tagggtgacg aaaagtcttg
      421 aaaagtcatt gctaaaatcg actggaaatc taccaggcct caacatcaaa cagggaaact
      481 ggtagttgaa gcttatctca atgagggaga tttgctagct taatgggaag cgcaccatga
      541 tacacaaaat gtcagtgatt gatcagattc ccagtggata acctccggaa aggtaagata
      601 tcagctttta agcctgatga acttagatct ttatggttga cttaacggat tagacggtta
      661 cctcataacc atcgatgata tccggacgta atgtgtatcc tcctaagcac attattttct
      721 accgacatct cacaatgtta ggtactgtgg gaggcttggc ttgaccaatt gcggggtagc
      781 ccgtgtgttc tcttagcaca tgtgttcgat tgcttattcc ttggtgctag gttcccactt
      841 gattcccggt tccattgaag attatattcg agattctcta cttcatcatt atgatcacct
      901 tcaagcatgt caagtcacag cataccatga tatggatacg gaagatatgc accagcttct
      961 cgataaatat aaacagatat gtcaggatac gggggtgtgt gcggaggtgc agtatattga
     1021 aacggaatat atcgagaaag gtattgttga atttgtactt caacacaatg tcagaaggct
     1081 tgtcatggga gcagccgcag acatgcaaaa ttcaagtaga atggtggaat taagatccaa
     1141 gaaagccata tatgtgtgtt tacatgcgac tgcttcctgt caaattcagt ttatacgcaa
     1201 aggagaagtt atttttacta ggaaaggttg gttgagtgaa gcagacgaac cgtttgtcac
     1261 tgattctgaa gagagtattc cgagttcagc atatgttagt gaaggacatc aaattatatt
     1321 acatactgac aacccaactc aagacgatgg tacaacgtct aaattcaacg aggacaatca
     1381 aaacgctaca tcattcagtc tcagacaaga aagaagtata aatgatgagc tttatgacct
     1441 gcttgtacaa gccattgaag atgcagataa gtccaaacga gatgcttttg aggagtctat
     1501 caggtgtcgg aaattacaaa aagatgtcat agagactaag cgcaaggtga gtgtatctga
     1561 aaagttgtgt gcgaaagaac tgagaataag gctagaggtt gaagagatgc tagaaagaac
     1621 cgtggaagaa ctccaaatgg aactcgaaca aaagtcatct ctagaaagtc aaattgcaga
     1681 ttctgtcgat attgtaaacg agcttgaaca tgcagtgttc tctaaggatg aacagcttaa
     1741 aatttataaa aaagaacgtg acaaattgaa ggtagaatgt gatgatgcag ttagactagt
     1801 cgaggaatta acagagaaaa atgcaaacga agccttaaac ttttactctg agtttgagtc
     1861 atcagaagtt aaagacgcca ttcgtaactt tgaccggtca cttaagatag gagaagggat
     1921 ttattatact acatacaaag gtttacttcg gcataccaaa gtggtcgtaa aggtgtttta
     1981 ctctcgtaat tctcaagtcc actcaggata tcagcaggag gtgaatcttg taagcaaact
     2041 taggcaccca aatcttgtaa ccttcatagg agcctgccca gataatcgga tgataattta
     2101 cgagtatctt tctggaggta gccttgaaga tcggctcgac tgtaaagacg atactccacc
     2161 attatcatgg caaaatagaa tccacattgc agcagagtta tgcatctctc ttatttttct
     2221 actttcatgt ggcgttgttc atggtaatct aaagccaact aacatccttc tagaccggaa
     2281 ctttgttact aaattaagtg actttggaat ccatcatgaa ctgtcccaaa acgagatctt
     2341 aagcaataat tacccatccg aatatatgga ccctgtgtat ctttctacag gagagtttac
     2401 tacgaattca gatgcttatt ctttcggtat tatattattg aggctattaa cgggtaaacc
     2461 tgctttgggg ataataaatg aagtgcaatt agcagtagat gatgataatt tgaagaatat
     2521 attggattct agtgctggag actggccatt tgtgcaggca caacaattgg ctgttctggc
     2581 attgagttgt tgtgatcttg ttactacaaa taggcccaat tttgaaaccg ggatttggag
     2641 ggtggttgaa ccgatacgcg cttcgtgtgg actttgttcg tctaagtcag gttccgaaag
     2701 acgacgagat attccacact actttgtttg tccaatcttt caggatacta tgggagatcc
     2761 ggtggtggca gctgatggat ttacatatga agaagaggct ataaaaggat ggttagacag
     2821 tggccataac acctcaccta tgaccaacat taagctagcc aacaccaacc ttgtcccgaa
     2881 ccatgcacta cggtctgcca ttcaagaatg gctccagcaa ccataaatcg ttttctttga
     2941 tattcattgg ttaaatttgt atatggaaaa cgtcgatgat atcataattt gtatgtgaaa
     3001 cgttgctagt aatgttattt gatccggata
//
LOCUS       XM_071829643            2749 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839551), transcript variant X1, mRNA.
ACCESSION   XM_071829643
VERSION     XM_071829643.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2749
                     /gene="LOC139839551"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139839551"
     CDS             108..2624
                     /gene="LOC139839551"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X1"
                     /protein_id="XP_071685744.1"
                     /db_xref="GeneID:139839551"
                     /translation="MAVVSSVSVEGARTLNQMIRYPVVDTSEIVETRDEIVAETNRRV
                     VDNDDVYVAVGKEIKDSLLTLRWALYKYGDKQICILHVHQPAQKIPMMGTKFPVNQLD
                     RLHVEAYHEAERQEMLQLLGRYKQMCLNSGVRIGVQYIEMGSIEKGIVEFILQNNVRR
                     LVMGAATDRHYSRRMVNLRSRKAIYVCLEAAASCQIQFVCKGNLIFTKEVRLGEPDVS
                     TSPPSPPININSDSGLTRRSVSERENSIIQPDNSNQDYHRVVSDSRGTGISSLLSDLN
                     LESTPPSRLNPGMASDEWTEFSQTSPSERGVNDELYVQLAQAMAEADNSKRDAFEESI
                     RRRKAEKDAIEAIHRVRTSENLYAEELRRRLEINGTLEKTKEEHEYVKKELYEVAEEF
                     RIALEQKLFLETQITVCDRTVRELEQKMFSAVELLQTCKKERDELQIECNDVLRLVEE
                     LRENQTDDSLNSSVSHFYSEFSFSEVKDATCNFDPFLKIGEGGYGSIFRGFIRHTEVA
                     VKMLNSHSLQGPSEFQQEVNVLSKLRHPNLVTLIGACPDAWIIIYEYLSGGSLEGRLE
                     CKNNTPPLSWQNRIRIATELCSVLIFLHSCGIVHGDLKPANLLLDKNLVTKLSDFGIC
                     RVLSQTELSSNNTSMCCRTNPKGTFLYWDPEFVDTGELTVKSDTYSFGIILLQLLTGK
                     PVLKLAKEVQDALKTEKLNKILDPTAGDWPYVVAQQLARLALNCCDRVRKNRPDLASE
                     VWRVLEPMQVFCGISGRRQIPHYFICPIFLEVMQDPVVAADGFTYEAEAIRGWLDSGH
                     KTSPMTNLELPNTNLVPNLALRSAIQEWLQQPWNHLIQIY"
     misc_feature    255..713
                     /gene="LOC139839551"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1572..2351
                     /gene="LOC139839551"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1572..1583,1590..1592,1596..1598,1629..1631,
                     1635..1637,1722..1724,1764..1775,1911..1913,1923..1928,
                     1932..1934,1962..1967)
                     /gene="LOC139839551"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2388..2555
                     /gene="LOC139839551"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
ORIGIN      
        1 gtttagggtt tttactccat attgactgat aaatttacac acatatgtgt caattgtcaa
       61 tggatgtatg tgtagcttat agcatatgaa tatagattaa gtttgagatg gctgtggtta
      121 gttctgtatc agtagaaggt gcacgaacct tgaatcagat gattaggtat cctgttgttg
      181 atacttcaga gattgttgaa actagggatg aaattgttgc cgaaacgaat cgtagagtag
      241 ttgataatga tgacgtttac gtggcggttg ggaaagagat taaagatagt ctgttaactc
      301 tgcgatgggc gttatataag tatggagata aacagatatg tatacttcat gttcatcaac
      361 ctgcacagaa gatccctatg atgggcacaa agtttccggt aaaccaactt gatagacttc
      421 atgtcgaggc gtaccatgaa gcggagaggc aggagatgct ccagcttctc ggaagatata
      481 agcagatgtg tctgaactca ggggtgcgta ttggggtgca atatattgaa atgggttcta
      541 ttgagaaagg tatcgttgag ttcatacttc agaacaatgt cagaaggctt gtcatgggag
      601 cagctacaga caggcactat tcaaggagga tggtgaatct gaggtccagg aaagccattt
      661 acgtgtgttt agaagcagct gcatcctgtc agattcaatt tgtatgcaaa ggaaatctca
      721 ttttcactaa ggaagtcagg ttgggtgaac ccgatgtttc aacgtccccg ccttcacctc
      781 caataaatat aaactctgat tctggcttga cccgaagatc tgttagtgaa agagagaata
      841 gcataataca gcccgataat tcaaatcaag actaccatag agtcgtgtct gacagtcgcg
      901 ggaccggaat atcatccttg ttgtcagatt taaatcttga gtcaactcct ccaagtagat
      961 tgaatccagg aatggcctct gatgaatgga ctgagttttc acagacaagt ccttccgaaa
     1021 gaggtgtgaa tgatgagctt tatgttcagc ttgctcaagc aatggctgag gcggacaatt
     1081 ccaaacgaga tgcatttgaa gaatctatca gacgcagaaa agctgaaaag gatgctattg
     1141 aggctataca cagggttaga acatccgaaa atttgtatgc tgaagagtta aggcgaaggc
     1201 tggagattaa tggaacacta gaaaaaacca aggaagaaca tgaatatgtt aaaaaggagc
     1261 tatatgaagt tgcagaagaa tttcgtatag cactcgaaca gaagttattt ctcgaaactc
     1321 aaattacagt gtgtgaccgt acggtgcgag agctcgaaca aaagatgttt tcagctgttg
     1381 agcttttgca gacttgcaaa aaggaacgtg acgagttgca aatagaatgt aacgatgtgc
     1441 ttagactagt agaggaactt agggagaatc aaacagacga ttccttaaac tcaagtgtct
     1501 ctcactttta ctccgagttc tcgttttcag aagtcaaaga tgccacatgt aactttgacc
     1561 cgtttctgaa gattggagaa gggggttatg gaagtatatt cagaggtttt attcgtcata
     1621 ctgaagtagc cgtaaagatg ttgaactcgc atagcctgca agggccttcg gaatttcagc
     1681 aggaggtcaa cgtcttgagc aaactgaggc acccaaatct cgtaacccta ataggtgcct
     1741 gcccagacgc ttggataata atctacgagt atctatctgg aggaagcctc gaaggccgac
     1801 tcgaatgcaa gaacaatact cccccgttat cttggcaaaa cagaatccgc attgccaccg
     1861 aattatgttc ggttctcatt ttccttcatt cttgtggcat cgttcatggt gatcttaaac
     1921 ccgctaatct tcttctagac aaaaacctcg ttaccaagtt aagcgacttc ggaatctgtc
     1981 gcgtgctctc tcaaaccgag ctttctagta ataacacatc aatgtgttgc agaaccaacc
     2041 caaaggggac atttttgtat tgggacccgg aatttgttga tactggagag cttactgtta
     2101 agtcagatac atactctttt ggtattatat tgttacagtt attgacgggt aagcccgttt
     2161 tgaagttggc caaggaagtg caggatgcac tgaaaacgga aaaattgaac aagatattgg
     2221 atcctacagc tggagactgg ccgtatgtgg tggcgcaaca gttggctcgt ttggcattga
     2281 attgttgtga ccgtgttcgt aaaaatcgtc ccgatcttgc gtctgaggta tggagggtgc
     2341 ttgaaccaat gcaggttttt tgtggaattt caggacggcg ccagattcca cactacttta
     2401 tttgtccaat ctttctggaa gtcatgcaag atccggtggt tgcggctgat ggatttactt
     2461 acgaagcaga ggcaataaga ggatggctag atagtggcca taaaacttca cccatgacca
     2521 accttgagct acccaacacc aatcttgtcc caaacctggc acttcggtct gcaatccagg
     2581 aatggctcca gcagccttgg aaccatttaa ttcaaattta ttaatcatat ttttacatcc
     2641 atgtttatgg atgaagaggt caagtaaaat gtgataaagt gtgtgtgtgt gtgtgtgtgt
     2701 gtgtgtgtgt gtgtgtgtgt gtgtgtgtat atatatatat atatatata
//
LOCUS       XM_071829644            2296 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839551), transcript variant X2, mRNA.
ACCESSION   XM_071829644
VERSION     XM_071829644.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2296
                     /gene="LOC139839551"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839551"
     CDS             108..2171
                     /gene="LOC139839551"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like isoform
                     X2"
                     /protein_id="XP_071685745.1"
                     /db_xref="GeneID:139839551"
                     /translation="MAVVSSVSVEGARTLNQMIRYPVVDTSEIVETRDEIVAETNRRV
                     VDNDDVYVAVGKEIKDSLLTLRWALYKYGDKQICILHVHQPAQKIPMMGTKFPVNQLD
                     RLHVEAYHEAERQEMLQLLGRYKQMCLNSGVRIGVQYIEMGSIEKGIVEFILQNNVRR
                     LVMGAATDRHYSRRMVNLRSRKAIYVCLEAAASCQIQFVCKGNLIFTKEVRLGEPDVS
                     TSPPSPPININSDSGLTRRSVSERENSIIQPDNSNQDYHRVVSDSRGTGISSLLSDLN
                     LESTPPSRLNPGMASDEWTEFSQTSPSERGVNDELYVQLAQAMAEADNSKRDAFEESI
                     RRRKAEKDAIEAIHRVRTSENLYAEELRRRLEINGTLEKTKEEHEYVKKELYEVAEEF
                     RIALEQKLFLETQITVCDRTVRELEQKMFSAVELLQTCKKERDELQIECNDVLRLVEE
                     LRENQTDDSLNSSVSHFYSEFSFSEVKDATCNFDPFLKIGEGGYGSIFRGFIRHTEVA
                     VKMLNSHSLQGPSEFQQELLTGKPVLKLAKEVQDALKTEKLNKILDPTAGDWPYVVAQ
                     QLARLALNCCDRVRKNRPDLASEVWRVLEPMQVFCGISGRRQIPHYFICPIFLEVMQD
                     PVVAADGFTYEAEAIRGWLDSGHKTSPMTNLELPNTNLVPNLALRSAIQEWLQQPWNH
                     LIQIY"
     misc_feature    255..713
                     /gene="LOC139839551"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    <1053..1517
                     /gene="LOC139839551"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    1572..>1688
                     /gene="LOC139839551"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    <1683..1898
                     /gene="LOC139839551"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1935..2102
                     /gene="LOC139839551"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
ORIGIN      
        1 gtttagggtt tttactccat attgactgat aaatttacac acatatgtgt caattgtcaa
       61 tggatgtatg tgtagcttat agcatatgaa tatagattaa gtttgagatg gctgtggtta
      121 gttctgtatc agtagaaggt gcacgaacct tgaatcagat gattaggtat cctgttgttg
      181 atacttcaga gattgttgaa actagggatg aaattgttgc cgaaacgaat cgtagagtag
      241 ttgataatga tgacgtttac gtggcggttg ggaaagagat taaagatagt ctgttaactc
      301 tgcgatgggc gttatataag tatggagata aacagatatg tatacttcat gttcatcaac
      361 ctgcacagaa gatccctatg atgggcacaa agtttccggt aaaccaactt gatagacttc
      421 atgtcgaggc gtaccatgaa gcggagaggc aggagatgct ccagcttctc ggaagatata
      481 agcagatgtg tctgaactca ggggtgcgta ttggggtgca atatattgaa atgggttcta
      541 ttgagaaagg tatcgttgag ttcatacttc agaacaatgt cagaaggctt gtcatgggag
      601 cagctacaga caggcactat tcaaggagga tggtgaatct gaggtccagg aaagccattt
      661 acgtgtgttt agaagcagct gcatcctgtc agattcaatt tgtatgcaaa ggaaatctca
      721 ttttcactaa ggaagtcagg ttgggtgaac ccgatgtttc aacgtccccg ccttcacctc
      781 caataaatat aaactctgat tctggcttga cccgaagatc tgttagtgaa agagagaata
      841 gcataataca gcccgataat tcaaatcaag actaccatag agtcgtgtct gacagtcgcg
      901 ggaccggaat atcatccttg ttgtcagatt taaatcttga gtcaactcct ccaagtagat
      961 tgaatccagg aatggcctct gatgaatgga ctgagttttc acagacaagt ccttccgaaa
     1021 gaggtgtgaa tgatgagctt tatgttcagc ttgctcaagc aatggctgag gcggacaatt
     1081 ccaaacgaga tgcatttgaa gaatctatca gacgcagaaa agctgaaaag gatgctattg
     1141 aggctataca cagggttaga acatccgaaa atttgtatgc tgaagagtta aggcgaaggc
     1201 tggagattaa tggaacacta gaaaaaacca aggaagaaca tgaatatgtt aaaaaggagc
     1261 tatatgaagt tgcagaagaa tttcgtatag cactcgaaca gaagttattt ctcgaaactc
     1321 aaattacagt gtgtgaccgt acggtgcgag agctcgaaca aaagatgttt tcagctgttg
     1381 agcttttgca gacttgcaaa aaggaacgtg acgagttgca aatagaatgt aacgatgtgc
     1441 ttagactagt agaggaactt agggagaatc aaacagacga ttccttaaac tcaagtgtct
     1501 ctcactttta ctccgagttc tcgttttcag aagtcaaaga tgccacatgt aactttgacc
     1561 cgtttctgaa gattggagaa gggggttatg gaagtatatt cagaggtttt attcgtcata
     1621 ctgaagtagc cgtaaagatg ttgaactcgc atagcctgca agggccttcg gaatttcagc
     1681 aggagttatt gacgggtaag cccgttttga agttggccaa ggaagtgcag gatgcactga
     1741 aaacggaaaa attgaacaag atattggatc ctacagctgg agactggccg tatgtggtgg
     1801 cgcaacagtt ggctcgtttg gcattgaatt gttgtgaccg tgttcgtaaa aatcgtcccg
     1861 atcttgcgtc tgaggtatgg agggtgcttg aaccaatgca ggttttttgt ggaatttcag
     1921 gacggcgcca gattccacac tactttattt gtccaatctt tctggaagtc atgcaagatc
     1981 cggtggttgc ggctgatgga tttacttacg aagcagaggc aataagagga tggctagata
     2041 gtggccataa aacttcaccc atgaccaacc ttgagctacc caacaccaat cttgtcccaa
     2101 acctggcact tcggtctgca atccaggaat ggctccagca gccttggaac catttaattc
     2161 aaatttatta atcatatttt tacatccatg tttatggatg aagaggtcaa gtaaaatgtg
     2221 ataaagtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtatata
     2281 tatatatata tatata
//
LOCUS       XM_071829646            2949 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839552), mRNA.
ACCESSION   XM_071829646
VERSION     XM_071829646.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2949
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2949
                     /gene="LOC139839552"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839552"
     CDS             201..2531
                     /gene="LOC139839552"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like"
                     /protein_id="XP_071685747.1"
                     /db_xref="GeneID:139839552"
                     /translation="MENEQRIDQILYPLIDTSSEDIIEIRDEIVHQTGRRRRIEDKVY
                     VAVGTDLKDCRSTLLWALQNSGGRQICILHVHQPAQSIPSAWQVTAYQEMDREDMHQL
                     LNKYKQICQDTGVCAEVQYIEMESIEKGIVEFVLQHNVRRLVMGSAANMRDSRMAELR
                     SKKAVYVCLHAAASCQIQFIRKGEVIFTRKGWLSGVDELNGLIPLNTNTDSRQSFLRS
                     TSVSTNTDSGQTSPSSTSVSEGLQVILHPDNLTQDDGTTSRFNEDIQNASPFGVIQEK
                     GINDELYDQLVQAMEDAGKSKRDAFEESMRCQKAQKDVIEAKRRVSVSENLYSEELRK
                     RREVEETLEKTMEELHMALEQKSILEGQNADFVDIVNELEQAVFSADDQRQILSKERD
                     DAIKLVGELTEKHADEASTSSVSNFYSEFESTEVKDAIGNFDPSLKIGEGTFKSTYKG
                     LLRHTEVVVKVFYSHNFQVPSEYQQEVNLLSKLRHPNLVTLIGACPDDRMIIYEYLSG
                     GSLEDRLECKDNTPSLSWQNRIRIAAELCAALIFLHSCGVVHGNLKPTNILLDRNLVT
                     KLTDFGIHHELSENEVSSNNASEYMDPAYLSTGEFTANSDAYSFGVILLRLLTGKPGL
                     GLTNEVQLVLDNDNLKNILDATAGDWPFVQAQQLAVLAMSCCDLVTTNRPDLETGAWR
                     VLEPIRVSCGLATSRLGSEGRRDIPHYFVCPIFQEAMQDPVVAADGFTYEAEALNGWL
                     DSGHNTSPMTNLELANTNLVPNHALRSAIQEWLQQP"
     misc_feature    324..749
                     /gene="LOC139839552"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1515..2261
                     /gene="LOC139839552"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1515..1526,1533..1535,1539..1541,1572..1574,
                     1578..1580,1665..1667,1707..1718,1854..1856,1866..1871,
                     1875..1877,1905..1910)
                     /gene="LOC139839552"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2319..2486
                     /gene="LOC139839552"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
ORIGIN      
        1 tccaattagt ttggtagtct gttcaaactt tttcatagcg taatatcaag ccttcagttt
       61 gtagtttgtt tccatagata tgaaaaaatg ggtttagggt tttactaaca taataaccct
      121 agtagtctaa cattttggag cacaaaacaa aatagtgagt tgcagattga ttgattgatt
      181 tggtcgattg tgttgtatca atggagaatg aacaaaggat cgatcagata ctgtatccac
      241 ttattgacac ctcctcagaa gatatcatcg aaattaggga tgaaattgtt catcaaacag
      301 gtcgtcgtcg tcgtattgag gacaaagtgt acgtggccgt tgggacggac ttgaaagact
      361 gtcggtcaac tctgctgtgg gccctacaga attcaggagg tagacagata tgtatacttc
      421 atgtccacca acctgcacaa tcaatacctt ctgcatggca agtcacagca taccaagaaa
      481 tggataggga agatatgcat cagcttctca acaaatataa acaaatatgt caagatacag
      541 gggtgtgtgc ggaggtgcag tatattgaaa tggaatctat tgagaaaggt attgttgagt
      601 ttgtacttca acacaatgtc agaaggcttg taatgggatc agccgcaaac atgcgagatt
      661 caagaatggc ggagttgaga tccaaaaaag ccgtatatgt gtgtttacat gcagctgctt
      721 catgtcagat tcaatttata cgcaaaggag aagttatttt tactaggaaa ggttggttga
      781 gtggagtcga tgaactgaat ggtctaattc ctttaaatac aaacactgat tctagacaga
      841 gttttctgag atcaacatca gttagtacaa acactgattc tggtcagact tctccaagtt
      901 caacatctgt cagtgaagga ctgcaagtta tattacatcc cgacaaccta actcaagacg
      961 atggtacaac atctagattc aacgaggaca ttcaaaatgc ttcgcctttc ggtgtcatac
     1021 aggaaaaagg tataaatgat gagctttatg accagcttgt acaagccatg gaagatgcag
     1081 gcaaatccaa acgagatgct tttgaggagt ctatgaggtg tcaaaaagca caaaaggatg
     1141 tcattgaggc taagcgcagg gttagtgtat ccgaaaactt gtattcggaa gaactgagaa
     1201 aaaggcgaga agttgaagag acgctagaaa aaaccatgga agaactccac atggcactcg
     1261 aacagaaatc aattctcgaa ggtcaaaatg cagattttgt tgatattgta aacgagcttg
     1321 aacaggcagt gttctctgct gatgatcagc gccagatttt gtccaaggaa cgtgacgatg
     1381 caattaaact agtcggggaa ctaacagaga aacatgcaga tgaagcctca acctcaagtg
     1441 tctctaactt ttactctgag tttgagtcaa cagaagtcaa agacgccatc ggtaactttg
     1501 acccttcact taagatagga gaagggactt ttaaaagtac ttacaaaggt ttacttcggc
     1561 ataccgaagt cgtcgtaaag gtgttttact ctcataactt tcaagtcccc tcagaatatc
     1621 agcaggaggt gaatcttttg agcaaactga ggcacccgaa tctcgtaacc ctaataggag
     1681 cctgcccgga tgatcggatg ataatttacg agtatctttc tgggggtagc cttgaagatc
     1741 ggctcgaatg caaagacaac actccctcgt tatcatggca aaacagaatc cgcattgctg
     1801 ctgaattatg tgctgcgctt atttttctcc attcgtgtgg ggtcgttcat ggtaacctaa
     1861 agccaactaa catccttcta gaccgaaact tagttaccaa attaaccgac tttggcatcc
     1921 atcatgaact ctccgaaaac gaggtttcaa gcaataacgc atccgaatat atggaccctg
     1981 cgtatctttc tacaggagag tttactgcga attcagatgc ttattctttc ggtgttatat
     2041 tattgaggct gttaacgggt aagcctggtt tagggttaac aaatgaagtg cagttagtgt
     2101 tggataacga taatttgaag aatatattgg atgctacggc cggagactgg ccgtttgtgc
     2161 aggcgcaaca gttggctgtt cttgcaatga gctgctgtga tcttgttacc acaaataggc
     2221 ctgatcttga aaccggggcg tggagggttc ttgaaccgat acgtgtttct tgtggacttg
     2281 caacgtcgag gttgggttca gagggacgac gagatattcc acactacttt gtttgtccaa
     2341 tctttcagga agctatgcaa gatccggtgg tcgcggctga tggatttact tatgaagcag
     2401 aggctttaaa tggatggtta gacagtggtc ataacacttc acctatgacc aaccttgagc
     2461 tagccaacac caaccttgtc ccgaaccatg cgcttcggtc tgccattcaa gaatggctcc
     2521 aacaaccttg aatcgttttc tttgatattc gactatcata ttattgatga tgattcatgt
     2581 tcatttgtat atatgggatg gaaaactaac tcttataaat tgtcctagtc tatgatgacc
     2641 cgagctaaat gaggtaagaa ttggtgcacg tactttttat tacagaaaat taactcgaat
     2701 cattcacatt agttactatc atcttggtta gccttttatc aatttcacga agaggcacat
     2761 taacgagata gtacagtaca tatcatcctt tttttacgag tcccatgacc gtgttgtcaa
     2821 gtcttgaatc acacaaaatt gtgattagca agtgacagta gtttatccct agtcaatttc
     2881 gagactagga atcaccaaaa catccttcaa gttcatacca ttgtcaagtt tatttctacc
     2941 aatatgtga
//
LOCUS       XM_071829647            2883 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839553), transcript variant X1, mRNA.
ACCESSION   XM_071829647
VERSION     XM_071829647.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2883
                     /gene="LOC139839553"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839553"
     CDS             202..2532
                     /gene="LOC139839553"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like"
                     /protein_id="XP_071685748.1"
                     /db_xref="GeneID:139839553"
                     /translation="MENEQRIDQILYPLIDTSSEDIIEIRDEIVHQTGRRRRIEDKVY
                     VAVGTDLKDCRSTLLWALQNSGGRQICILHVHQPAQSIPSAWQVTAYQEMDREDMHQL
                     LNKYKQICQDTGVCAEVQYIEMESIEKGIVEFVLQHNVRRLVMGSAANMRDSRMAELR
                     SKKAVYVCLHAAASCQIQFIRKGEVIFTRKGWLSGVDELNGLIPLNTNTDSRQSFLRS
                     TSVSTNTDSGQTSPSSTSVSEGLQVILHPDNLTQDDGTTSRFNEDIQNASPFGVIQEK
                     GINDELYDQLVQAMEDAGKSKRDAFEESMRCQKAQKDVIEAKRRVSVSENLYSEELRK
                     RREVEETLEKTMEELHMALEQKSILEGQNADFVDIVNELEQAVFSADDQRQILSKERD
                     DAIKLVGELTEKHADEASTSSVSNFYSEFESTEVKDAIGNFDPSLKIGEGTFKSTYKG
                     LLRHTEVVVKVFYSHNFQVPSEYQQEVNLLSKLRHPNLVTLIGACPDDRMIIYEYLSG
                     GSLEDRLECKDNTPSLSWQNRIRIAAELCAALIFLHSCGVVHGNLKPTNILLDRNLVT
                     KLTDFGIHHELSENEVSSNNASEFMDPAYLSTGEFTANSDAYSFGVILLRLLTGKPGL
                     GLTNEVQLALDNDNLKNILDATAGDWPFVQAQQLAVLAMSCCDLVTTNRPDLETGAWR
                     VLEPIRVSCGLATSRLGSEGRRDIPHYFVCPIFQEAMQDPVVAADGFTYEAEALNGWL
                     DSGHNTSPMTNLELANTNLVPNHALRSAIQEWLQQP"
     misc_feature    325..750
                     /gene="LOC139839553"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1516..2262
                     /gene="LOC139839553"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1516..1527,1534..1536,1540..1542,1573..1575,
                     1579..1581,1666..1668,1708..1719,1855..1857,1867..1872,
                     1876..1878,1906..1911)
                     /gene="LOC139839553"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2320..2487
                     /gene="LOC139839553"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
ORIGIN      
        1 atccaattag tttggtagtc tgttcaaact ttttcatagc gtaatatcaa gccttcagtt
       61 tgtagtttgt ttccatagat atgaaaaaat gggtttaggg ttttactaac ataataaccc
      121 tagtagtcta acattttgga gcacaaaaca aaatagtgag ttgcagattg attgattgat
      181 ttggtcgatt gtgttgtatc aatggagaat gaacaaagga tcgatcagat actgtatcca
      241 cttattgaca cctcctcaga agatatcatc gaaattaggg atgaaattgt tcatcaaaca
      301 ggtcgtcgtc gtcgtattga ggacaaagtg tacgtggccg ttgggacgga cttgaaagac
      361 tgtcggtcaa ctctgctgtg ggccctacag aattcaggag gtagacagat atgtatactt
      421 catgtccacc aacctgcaca atcaatacct tctgcatggc aagtcacagc ataccaagaa
      481 atggataggg aagatatgca tcagcttctc aacaaatata aacaaatatg tcaagataca
      541 ggggtgtgtg cggaggtgca gtatattgaa atggaatcta ttgagaaagg tattgttgag
      601 tttgtacttc aacacaatgt cagaaggctt gtaatgggat cagccgcaaa catgcgagat
      661 tcaagaatgg cggagttgag atccaaaaaa gccgtatatg tgtgtttaca tgcagctgct
      721 tcatgtcaga ttcaatttat acgcaaagga gaagttattt ttactaggaa aggttggttg
      781 agtggagtcg atgaactgaa tggtctaatt cctttaaata caaacactga ttctagacag
      841 agttttctga gatcaacatc agttagtaca aacactgatt ctggtcagac ttctccaagt
      901 tcaacatctg tcagtgaagg actgcaagtt atattacatc ccgacaacct aactcaagac
      961 gatggtacaa catctagatt caacgaggac attcaaaatg cttcgccttt cggtgtcata
     1021 caggaaaaag gtataaatga tgagctttat gaccagcttg tacaagccat ggaagatgca
     1081 ggcaaatcca aacgagatgc ttttgaggag tctatgaggt gtcaaaaagc acaaaaggat
     1141 gtcattgagg ctaagcgcag ggttagtgta tccgaaaact tgtattcgga agaactgaga
     1201 aaaaggcgag aagttgaaga gacgctagaa aaaaccatgg aagaactcca catggcactc
     1261 gaacagaaat caattctcga aggtcaaaat gcagattttg ttgatattgt aaacgagctt
     1321 gaacaggcag tgttctctgc tgatgatcag cgccagattt tgtccaagga acgtgacgat
     1381 gcaattaaac tagtcgggga actaacagag aaacatgcag atgaagcctc aacctcaagt
     1441 gtctctaact tttactctga gtttgagtca acagaagtca aagacgccat cggtaacttt
     1501 gacccttcac ttaagatagg agaagggact tttaaaagta cttacaaagg tttacttcgg
     1561 cataccgaag tcgtcgtaaa ggtgttttac tctcataact ttcaagtccc ctcagaatat
     1621 cagcaggagg tgaatctttt gagcaaactg aggcacccga atctcgtaac cctaatagga
     1681 gcctgcccgg atgatcggat gataatttac gagtatcttt ctgggggtag ccttgaagat
     1741 cggcttgaat gcaaagacaa cactccctcg ttatcatggc aaaacagaat ccgcattgct
     1801 gctgaattat gtgctgcgct tatttttctc cattcgtgtg gggtcgttca tggtaaccta
     1861 aagccaacta acatccttct agaccgaaac ttagttacca aattaaccga ctttggcatc
     1921 catcatgaac tctccgaaaa cgaggtttca agcaataacg catccgaatt tatggaccct
     1981 gcgtatcttt ctacaggaga gtttactgcg aattcagatg cttattcttt cggcgttata
     2041 ttattgaggc tgttaacggg taagcctggt ttagggttaa caaatgaagt gcagttagcg
     2101 ttggataacg ataatttgaa gaatatattg gatgctacgg ccggagactg gccgtttgtg
     2161 caggcgcaac agttggctgt tcttgcaatg agctgctgtg atcttgttac cacaaatagg
     2221 cctgatcttg aaactggggc gtggagggtt cttgaaccga tacgtgtttc ttgtggactt
     2281 gcaacgtcga ggttgggttc agagggacga cgagatattc cacactactt tgtttgtcca
     2341 atctttcagg aagctatgca agatccggtg gtcgcggctg atggatttac ttatgaagca
     2401 gaggctttaa atggatggtt agacagtggc cataacacct cacctatgac caaccttgag
     2461 ctagccaaca ccaaccttgt cccgaaccat gcacttcggt ctgccattca agaatggctc
     2521 caacaacctt gaatcgtttt ctttgatatt cgactatcat attattgatg atgattcatg
     2581 ttcatttgta tatatgggat ggaaaactat tataaattgt cctagtctat gatgacccga
     2641 gctaaatgag gtaagaattg gtgcacgtac tttattagta ttaattaaag ccatttattc
     2701 taattaacgt gcattatgtc tcaaaagaca tttgagttcg gggtcaaccc tttcttttgt
     2761 ctaacttgaa caaatcaatg gccgccgaag atattttttg gctacatcta tagtacaatt
     2821 tctccgaaat tactttaaga cttacaatat agtcacaact agttgtggag ccctcttatc
     2881 gaa
//
LOCUS       XR_011756980            3044 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839553), transcript variant X2, misc_RNA.
ACCESSION   XR_011756980
VERSION     XR_011756980.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3044
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3044
                     /gene="LOC139839553"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839553"
     misc_RNA        1..3044
                     /gene="LOC139839553"
                     /product="U-box domain-containing protein 33-like,
                     transcript variant X2"
                     /db_xref="GeneID:139839553"
ORIGIN      
        1 atccaattag tttggtagtc tgttcaaact ttttcatagc gtaatatcaa gccttcagtt
       61 tgtagtttgt ttccatagat atgaaaaaat gggtttaggg ttttactaac ataataaccc
      121 tagtagtcta acattttgga gcacaaaaca aaatagtgag ttgcagattg attgattgat
      181 ttggtcgatt gtgttgtatc aatggagaat gaacaaagga tcgatcagat actgtatcca
      241 cttattgaca cctcctcaga agatatcatc gaaattaggg atgaaattgt tcatcaaaca
      301 ggtcgtcgtc gtcgtattga ggacaaagtg tacgtggccg ttgggacgga cttgaaagac
      361 tgtcggtcaa ctctgctgtg ggccctacag aattcaggag gtagacagat atgtatactt
      421 catgtccacc aacctgcaca atcaatacct tctgcatggc aagtcacagc ataccaagaa
      481 atggataggg aagatatgca tcagcttctc aacaaatata aacaaatatg tcaagataca
      541 ggggtgtgtg cggaggtgca gtatattgaa atggaatcta ttgagaaagg tattgttgag
      601 tttgtacttc aacacaatgt cagaaggctt gtaatgggat cagccgcaaa catgcgagat
      661 tcaagaatgg cggagttgag atccaaaaaa gccgtatatg tgtgtttaca tgcagctgct
      721 tcatgtcaga ttcaatttat acgcaaagga gaagttattt ttactaggaa aggttggttg
      781 agtggagtcg atgaactgaa tggtctaatt cctttaaata caaacactga ttctagacag
      841 agttttctga gatcaacatc agttagtaca aacactgatt ctggtcagac ttctccaagt
      901 tcaacatctg tcagtgaagg actgcaagtt atattacatc ccgacaacct aactcaagac
      961 gatggtacaa catctagatt caacgaggac attcaaaatg cttcgccttt cggtgtcata
     1021 caggaaaaag gtataaatga tgagctttat gaccagcttg tacaagccat ggaagatgca
     1081 ggcaaatcca aacgagatgc ttttgaggag tctatgaggt gtcaaaaagc acaaaaggat
     1141 gtcattgagg ctaagcgcag ggttagtgta tccgaaaact tgtattcgga agaactgaga
     1201 aaaaggcgag aagttgaaga gacgctagaa aaaaccatgg aagaactcca catggcactc
     1261 gaacagaaat caattctcga aggtcaaaat gcagattttg ttgatattgt aaacgagctt
     1321 gaacaggcag tgttctctgc tgatgatcag cgccagattt tgtccaagga acgtgacgat
     1381 gcaattaaac tagtcgggga actaacagag aaacatgcag atgaagcctc aacctcaagt
     1441 gtctctaact tttactctga gtttgagtca acagaagtca aagacgccat cggtaacttt
     1501 gacccttcac ttaagatagg agaagggact tttaaaagta cttacaaagg tttacttcgg
     1561 cataccgaag tcgtcgtaaa ggtgttttac tctcataact ttcaagtccc ctcagaatat
     1621 cagcaggagg tgaatctttt gagcaaactg aggcacccga atctcgtaac cctaatagga
     1681 gcctgcccgg atgatcggat gataatttac gagtatcttt ctgggggtag ccttgaagat
     1741 cggcttgaat gcaaagacaa cactccctcg ttatcatggc aaaacagaat ccgcattgct
     1801 gctgaattat gtgctgcgct tatttttctc cattcgtgtg gggtcgttca tggtaaccta
     1861 aagccaacta acatccttct agaccgaaac ttagttacca aattaaccga ctttggcatc
     1921 catcatgaac tctccgaaaa cgaggtttca agcaataacg catccgaatt tatggaccct
     1981 gcgtatcttt ctacaggaga gtttactgcg aattcagatg cttattcttt cggcgttata
     2041 ttattgaggc tgttaacggg taagcctggt ttagggttaa caaatgaagt gcagttagcg
     2101 ttggataacg ataatttgaa gaatatattg gatgctacgg ccggagactg gccgtttgtg
     2161 caggcgcaac agttggctgt tcttgcaatg agctgctgtg atcttgttac cacaaatagg
     2221 cctgatcttg aaactggggc gtggagggtt cttgaaccga tacgtgtttc ttgtggactt
     2281 gcaacgtcga ggttgggttc agagggacga cgagatattc cacactactt tgtttgtcca
     2341 atctttcagg aagctatgca agatccggtg gtcgcggctg atggatttac ttatgaagca
     2401 gaggctttaa atggatggtt agacagtggc cataacacct cacctatgac caaccttgag
     2461 ctagccaaca ccaaccttgt cccgaaccat gcacttcggt ctgccattca agaatggctc
     2521 caacaacctt gaatcgtttt ctttgatatt cgactatcat attattgatg atgattcatg
     2581 ttcatttgta tatatgggat ggaaaactat tataaattgt cctagtctat gatgacccga
     2641 gctaaatgag ttcgggatca ctcaggagtg actaaaccac tcacgtattc atctctcgca
     2701 gttgcataac ctgcccccaa ttgctgcaca ggtggaaaca cgtttcaatc caagggcatg
     2761 agcggtaaaa ctcccctcgc tcactgcccc cacaacgcga tgtgcggacg acacccttgg
     2821 gtgaaattca agggttaagg gacaaccttg tgtgcgatga tgcactccac gggagtcgaa
     2881 ctattgacat ctcactaata gaggcagacc actactacat gagctacaac accgtataat
     2941 tattattata ttattctcgc ataagaccat atataataaa ttttagagat gttttctttt
     3001 taaacttttg ttattcaatg taaataattt ctatcaacaa cgcg
//
LOCUS       XR_011756981            2986 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839553), transcript variant X3, misc_RNA.
ACCESSION   XR_011756981
VERSION     XR_011756981.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2986
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2986
                     /gene="LOC139839553"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839553"
     misc_RNA        1..2986
                     /gene="LOC139839553"
                     /product="U-box domain-containing protein 33-like,
                     transcript variant X3"
                     /db_xref="GeneID:139839553"
ORIGIN      
        1 atccaattag tttggtagtc tgttcaaact ttttcatagc gtaatatcaa gccttcagtt
       61 tgtagtttgt ttccatagat atgaaaaaat gggtttaggg ttttactaac ataataaccc
      121 tagtagtcta acattttgga gcacaaaaca aaatagtgag ttgcagattg attgattgat
      181 ttggtcgatt gtgttgtatc aatggagaat gaacaaagga tcgatcagat actgtatcca
      241 cttattgaca cctcctcaga agatatcatc gaaattaggg atgaaattgt tcatcaaaca
      301 ggtcgtcgtc gtcgtattga ggacaaagtg tacgtggccg ttgggacgga cttgaaagac
      361 tgtcggtcaa ctctgctgtg ggccctacag aattcaggag gtagacagat atgtatactt
      421 catgtccacc aacctgcaca atcaatacct tctgcatggc aagtcacagc ataccaagaa
      481 atggataggg aagatatgca tcagcttctc aacaaatata aacaaatatg tcaagataca
      541 ggggtgtgtg cggaggtgca gtatattgaa atggaatcta ttgagaaagg tattgttgag
      601 tttgtacttc aacacaatgt cagaaggctt gtaatgggat cagccgcaaa catgcgagat
      661 tcaagaatgg cggagttgag atccaaaaaa gccgtatatg tgtgtttaca tgcagctgct
      721 tcatgtcaga ttcaatttat acgcaaagga gaagttattt ttactaggaa aggttggttg
      781 agtggagtcg atgaactgaa tggtctaatt cctttaaata caaacactga ttctagacag
      841 agttttctga gatcaacatc agttagtaca aacactgatt ctggtcagac ttctccaagt
      901 tcaacatctg tcagtgaagg actgcaagtt atattacatc ccgacaacct aactcaagac
      961 gatggtacaa catctagatt caacgaggac attcaaaatg cttcgccttt cggtgtcata
     1021 caggaaaaag gtataaatga tgagctttat gaccagcttg tacaagccat ggaagatgca
     1081 ggcaaatcca aacgagatgc ttttgaggag tctatgaggt gtcaaaaagc acaaaaggat
     1141 gtcattgagg ctaagcgcag ggttagtgta tccgaaaact tgtattcgga agaactgaga
     1201 aaaaggcgag aagttgaaga gacgctagaa aaaaccatgg aagaactcca catggcactc
     1261 gaacagaaat caattctcga aggtcaaaat gcagattttg ttgatattgt aaacgagctt
     1321 gaacaggcag tgttctctgc tgatgatcag cgccagattt tgtccaagga acgtgacgat
     1381 gcaattaaac tagtcgggga actaacagag aaacatgcag atgaagcctc aacctcaagt
     1441 gtctctaact tttactctga gtttgagtca acagaagtca aagacgccat cggtaacttt
     1501 gacccttcac ttaagatagg agaagggact tttaaaagta cttacaaagg tttacttcgg
     1561 cataccgaag tcgtcgtaaa ggtgttttac tctcataact ttcaagtccc ctcagaatat
     1621 cagcaggagg tgaatctttt gagcaaactg aggcacccga atctcgtaac cctaatagga
     1681 gcctgcccgg atgatcggat gataatttac gagtatcttt ctgggggtag ccttgaagat
     1741 cggcttgaat gcaaagacaa cactccctcg ttatcatggc aaaacagaat ccgcattgct
     1801 gctgaattat gtgctgcgct tatttttctc cattcgtgtg gggtcgttca tggtaaccta
     1861 aagccaacta acatccttct agaccgaaac ttagttacca aattaaccga ctttggcatc
     1921 catcatgaac tctccgaaaa cgaggtttca agcaataacg catccgaatt tatggaccct
     1981 gcgtatcttt ctacaggaga gtttactgcg aattcagatg cttattcttt cggcgttata
     2041 ttattgaggc tgttaacggg taagcctggt ttagggttaa caaatgaagt gcagttagcg
     2101 ttggataacg ataatttgaa gaatatattg gatgctacgg ccggagactg gccgtttgtg
     2161 caggcgcaac agttggctgt tcttgcaatg agctgctgtg atcttgttac cacaaatagg
     2221 cctgatcttg aaactggggc gtggagggtt cttgaaccga tacgtgtttc ttgtggactt
     2281 gcaacgtcga ggttgggttc agagggacga cgagatattc cacactactt tgtttgtcca
     2341 atctttcagg aagctatgca agatccggtg gtcgcggctg atggatttac ttatgaagca
     2401 gaggctttaa atggatggtt agacagtggc cataacacct cacctatgac caaccttgag
     2461 ctagccaaca ccaaccttgt cccgaaccat gcacttcggt ctgccattca agaatggctc
     2521 caacaacctt gaatcgtttt ctttgatatt cgactatcat attattgatg atgattcatg
     2581 ttcatttgta tatatgggat ggaaaactat tataaattgt cctagtctat gatgacccga
     2641 gctaaatgag cagttcggga tcactcagga gggactaaac cactcacgta ttcatctctc
     2701 gcagttgcat aacctgcccc caattgctgc acaggaggaa acacgtttca atccgagggc
     2761 atgagcggta aaactcccct cgctcactgc ccccacaacg cgatgtgcga aaaacacctt
     2821 tgggtgaaat tcaagggtta agggacaacc atgtgtgcga tgatgcactc cacaggagtc
     2881 gaactattga catctcacta atagagaggc agaccactac tacatgaact acaacaccgt
     2941 ataattatta ttatattatt ctcgcataag accatatata ataaat
//
LOCUS       XM_071829648            1806 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139839554), mRNA.
ACCESSION   XM_071829648
VERSION     XM_071829648.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1806
                     /gene="LOC139839554"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839554"
     CDS             144..1736
                     /gene="LOC139839554"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like"
                     /protein_id="XP_071685749.1"
                     /db_xref="GeneID:139839554"
                     /translation="MPFKQHVLNPSAPSTPEIGMHDELFDQIEQAMAEAESSKRDAFE
                     ESTRRSRAEKDAIESKRRVKASENMYNEELRQRRDIAETLEKTKEEHERNKKELNEVS
                     KKLRMELEQKLSLESQIAEFDHTVQELEQKMLTAIQMLQNYKKERDELQEKCDGALKL
                     VDELKEKHEKEVSNSSVTQFYTEFDFSEVRDATRNFDPFLKIGEGDYGSTFRGFLQHT
                     EVAVKMLYAHSLQGPSEFQQEVNVLCKLRHPNLVAVIGACPDARIIIYEYLSGGNLEN
                     RLNCTDKNLSLSWQDRICIAAELCSVLIFLHSCGVVHGDLKPNKILFDKNMVTKLSDF
                     GNYHAISQNEVSSDSMSFESDMRSDTYAFGIILLRLLTGQDSSGLLKEEVQYALNEKK
                     LDIMLDSTAGNWPFVQAQQLATLAMNCCDGVSKNRPDIAFEVWRVLEPMRISCGLSSS
                     RSIFKGQQQIPSYFICPISQETMQDPVVAADGYTYEAEVLQGWFDSGHDTSPMTNLKL
                     ASTDLVPNHALRSAIQEWLQQP"
     misc_feature    <207..>656
                     /gene="LOC139839554"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; Region: YhaN; COG4717"
                     /db_xref="CDD:443752"
     misc_feature    747..1466
                     /gene="LOC139839554"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(747..758,765..767,771..773,804..806,810..812,
                     897..899,939..950,1086..1088,1098..1103,1107..1109,
                     1137..1142)
                     /gene="LOC139839554"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1524..1691
                     /gene="LOC139839554"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
ORIGIN      
        1 ctaatgaatg gagtaggttt tcaaagacaa gtccttcaac aagttcacaa gtgtctacat
       61 gttcaactga atttgttgat gatttaggat cactcacata tacaataaat gaaggtagcg
      121 aaatcgaatc tggcttcggt gcgatgcctt tcaaacagca tgttctaaat ccatcagctc
      181 ccagcactcc ggaaataggt atgcatgatg agctttttga tcaaattgaa caagccatgg
      241 ctgaggcaga aagttcaaaa cgggatgcat ttgaagagtc taccaggcgc agtagagcag
      301 aaaaagatgc catcgagtct aaacgaaggg tcaaagcatc tgaaaacatg tacaatgagg
      361 aattgagaca aaggagagat attgccgaaa cactagaaaa aactaaagaa gaacatgaaa
      421 gaaataaaaa ggaattaaat gaggtttcaa aaaaactacg tatggaactt gaacagaaat
      481 tatccctcga aagtcaaatt gcagagtttg accatacagt gcaggagctg gagcaaaaaa
      541 tgttaactgc aattcagatg ctgcagaatt acaaaaagga gcgtgacgag ttgcaggaaa
      601 agtgcgatgg agcacttaaa cttgtagatg aactgaagga aaaacacgaa aaagaagtct
      661 cgaactcaag tgtcactcag ttctacaccg agtttgactt ttcagaagtc agagacgcta
      721 cccgtaactt tgacccgttt cttaagattg gagaaggaga ttatggaagt acgttcagag
      781 gctttcttca gcatactgaa gtagctgtaa aaatgttata tgcacatagc cttcaaggac
      841 cttcagaatt tcagcaggag gtgaatgttt tgtgcaaact aaggcacccg aatcttgtag
      901 cagtaatagg agcctgccca gatgcaagga taatcatcta cgagtatctt tcgggaggaa
      961 accttgaaaa tcgacttaac tgcacagaca agaatctttc attatcatgg caagatagaa
     1021 tttgcattgc tgctgagtta tgttcggtgc ttatttttct tcattcttgt ggcgttgttc
     1081 acggtgatct aaagcccaat aaaatcctat tcgacaaaaa catggttacc aagttaagtg
     1141 actttggaaa ctatcatgcg atctcgcaaa acgaggtttc aagcgatagc atgtcttttg
     1201 aaagcgacat gaggtcagat acgtacgctt ttggtatcat attattgagg ctattgacgg
     1261 gccaagattc ttcggggtta ctaaaagagg aagtgcaata tgcacttaat gaaaagaagt
     1321 tggatattat gttggattcg acagctggca attggccgtt tgtacaagca caacagttgg
     1381 ctacattagc aatgaattgc tgtgatggtg tcagtaaaaa taggcctgat attgcatttg
     1441 aggtttggag ggtgctcgaa ccgatgcgga tctcttgcgg tctctcgtca tcaagatcca
     1501 tatttaaagg acagcaacaa attccatctt actttatttg tccaatctct caagagacta
     1561 tgcaagatcc ggtggttgct gcggatggat atacttacga agcagaggtt ttacaaggat
     1621 ggtttgacag tggccatgac acctcaccca tgacgaatct taagctagcc agcaccgatc
     1681 ttgtcccaaa tcacgcactt agatctgcta ttcaagaatg gcttcagcag ccatgaacta
     1741 gtttatttta cattcaattc aattatcata taacatataa tataattatg caaatgtgtg
     1801 tatacg
//
LOCUS       XM_071829649            7361 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mediator of RNA polymerase
            II transcription subunit 12 (LOC139839555), mRNA.
ACCESSION   XM_071829649
VERSION     XM_071829649.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7361
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..7361
                     /gene="LOC139839555"
                     /note="mediator of RNA polymerase II transcription subunit
                     12; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139839555"
     CDS             312..6752
                     /gene="LOC139839555"
                     /codon_start=1
                     /product="mediator of RNA polymerase II transcription
                     subunit 12"
                     /protein_id="XP_071685750.1"
                     /db_xref="GeneID:139839555"
                     /translation="MQRYHATNCTSAVNNSAVGGSLGRDTSRAESSALPANFPLNRRS
                     SQLAPYKLRCEKDALNSRLPPPDFHPPTLNCPEETLTKDYVLAGYRETVEGLEESREI
                     SLSQIPTFTKPVILKCKEAIRKYHRAINESRAQKRKAGQVYGVPLTGSLLSKPGVFPE
                     QKASGEDFRKKWIEGLSQQHKRLRALADHVPHGYRRKSLFEVLIRNNVPLLRATWYIK
                     VTYLNQVRPGSSSTLSGTPDKARFSRSEQWTKDVIEYLQYLLDEFYLKSHSTMHSKDR
                     SPQFAYGGSIQHKSDSMVAFVDGEEPSLQFKWWYVVRIIQWHYAEGLLLPSLIIDWVL
                     NQLQDKESLGILQLLLPIIYGVIETIVLSQNYVRNLVGVAVRFIQEPSPGGSDLVDNS
                     RRAYTISALVEILRYLILAVPDTFVALNCFPLPSCVVSNSTNDGSLITRVSGEGGKKR
                     LELHGASLSVKSVVSSVQKCSMNLARAARPGQPGHNVAKAVNELDKVLIHGDITVAYK
                     CMFEDFSDETGDKRWISEVSSNLRSSLKWIGNVSSSLVSSVLFICEWATCDFRDFRTN
                     PPSNIKFSGKRDFTQIYVATRLLEMKMRSKHRSSKSKVGPKKVKDLSHFFQSPGPLHD
                     IVVCWLDQHQAQNAEGFKRVQLLINELIRSGIFYPQAYVRELIVSGVMGQDDAMVDFD
                     RRRRHYKLLKNLPCSYIQGVIEEAQIAETSLVSEAMHIYSNERRLLLHELSCHSKNIN
                     SMSKRKNHQMFGLSNRNINRTSKIDELMNSISILLHFPNSDSTPTLNGVDESASVKRP
                     ARPIVISEGTPGCEECRRAKRQKVEEKSSYISDDEDIWWIKKGSLKSLESFRPEPPVR
                     QVKQATRGRQKVVRKTSSLAQLAAARVESSQGASTSHVCDSKINCPHHSNDNDVTKLT
                     DSVKTVLSGDVASIGKALKRVPFDDKRAVVVWLMGIVRKLVDEAGNVTETAAKVGSYG
                     RVPPVDDKGVSKWKLGEDELSNILYLMDVCDDLVSAARFLIWLLPKVPVNPSPSVHGG
                     RNVMIVQRNAENQLFGVGEPFILSSLRRYENILAAADLIPETLTAMMHRTSVVMASSG
                     RVSGSIALVFSRQMLQKYGQVASVVEWVKNFKTTADKRLVMELESGRSSDGEFGFPLG
                     VPAGVQDFDDFLLKKISNVRISRVGLSMRDTVQRLVDEAISAFYGQEKKSFVGSSLKR
                     PSVEKSDDGFSIAQQVVKGLLDCMRQTGGAAQEGDPTLVAFAVSAIVTNVGQVIAKIP
                     EMTPLSLNFARHILRIHLTCLSLLKDALGERQSRVFEIAIATEASSSLAQVFAPPKAS
                     RGQLQLSPERDPMSTDNSKTTFSKTAKITGAISALVIGAVLQGIASLERMVTVLRLKE
                     GLNVIQFVKSTRSNSNGNARSIGDSKIDNSAEVSVHWFRVLVGNCRTVSDGFIVELLG
                     ESSIVALSRIQRMLPIKLVFPPAFAIFGFLVWKRFIVNANVAARDNVSQLFQSLTISI
                     SDAIKHLPFRDVCLRECATLYDIVSADTTDAEFAGMLDLSGPDMHSKLAAFVPLRART
                     FLNSIIDCHLPHEILLHDDGIRAELNEMKLLDKLVHVLDTLQPAKFHWQWVELRLLLN
                     EQAVIEKVEARDASLVDALRSFAPNNENLGTSENENNFIQMLLTRLLVRPDAAPLFSE
                     VVHRLGRSLEDEVLQQAKWFLRGHDVLFGRKSIRQRLINISESKGLSTKIQFSKPWGW
                     CNSSSDGPGPGPTKKKNKRKFEMVSIEEGEVVDDGNGTDTKRQSRKFSQVSDVEAFIV
                     GQQHVTEKALVEFLLPCIDQSSDDSRVTFASDLIKQMNEIEQQISMVTHGVTNKPTGT
                     IEGPVTKGNTRKGIRGGSPGLARRPAGPVEMMPPSPSALRASLLLRLQLLLRLLPVIC
                     ADGEPSARNMRHMLASVVVRLLGSRVVHEDADLSNPVLSHQLGESLFDRLLLVLHALL
                     SGSQPYWLRPKSISKSTPEGTRDSTLYDRDVAESLQNELDNMQLPDAVRWRIQTAMPF
                     VFSSVRVSISCQPPIVPPQALGFLQPSIISAPGPLPLSFRNNQISSSRSSISNGPGKA
                     TKPVFSQPESDQEIIDPWTLLEDGAGSGPSSINAAAIAGSDHANLKASSWLKGAVRVR
                     RMDLTYIGAIDDDS"
     misc_feature    783..965
                     /gene="LOC139839555"
                     /note="Transcription mediator complex subunit Med12;
                     Region: Med12; pfam09497"
                     /db_xref="CDD:462818"
     polyA_site      7361
                     /gene="LOC139839555"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acgattcgtc tttctgaaat ttcgaatccc taatcttctt ctacattttt attcgattaa
       61 acatatttgt atacataatt ttacatctat aattcaaatc gtacgcttta cccttgttaa
      121 tttcttggtt cttgggattc aaaaccctag tttcactgac accccttaga aaccctagtt
      181 tcaattttcg aacttgttaa caactctgtt tgcatgttta caacttgatt tagggtaatt
      241 tcataaagcg ttctgcttga ttacgaagtt attcgatgtg ggttacagta tgcgggtcat
      301 agtttggaga aatgcaacgg tatcatgcta ccaactgcac tagtgcagtc aataacagtg
      361 cagttggtgg ctcattagga agggatacat cccgagccga gtcgtctgcg cttcctgcga
      421 attttccatt aaaccggcgc tcttcacaac ttgcaccata caaattaagg tgtgagaaag
      481 atgcgttaaa ttcaaggctt cccccacctg actttcatcc tccaacttta aattgccccg
      541 aggaaacact tacgaaggac tatgtgcttg ctggataccg agagaccgtt gaggggcttg
      601 aggagtcgag agagatatcg ttatcacaga ttcctacttt taccaagcct gtgatcctta
      661 agtgcaagga ggcaatcaga aaatatcatc gagcaattaa tgaatctcgt gcgcaaaaac
      721 gcaaggctgg tcaagtttat ggagtccctt taactggtag tttattgagt aagcctggtg
      781 tttttcccga acaaaaagcg agcggtgaag attttcggaa gaaatggatt gagggattgt
      841 ctcaacagca taaacgtttg cgggctttag ctgatcatgt tccacatggt tatagaagaa
      901 aatcactttt tgaagttctt atcagaaaca acgtaccact acttagagct acttggtata
      961 tcaaagtaac atatcttaat caggttcgac ccgggtcttc tagtacattg tctgggacac
     1021 ctgataaagc acgattttcc cgctcagagc agtggacaaa agatgttatc gagtacttac
     1081 aatatctttt ggatgaattt tatttgaaat ctcactctac gatgcattct aaggaccgat
     1141 caccccagtt tgcatatggt gggtctattc agcataaaag tgactcaatg gtggctttcg
     1201 ttgatggtga ggagccatct ttacaattta aatggtggta tgtggtgcga atcatacagt
     1261 ggcattacgc tgaagggttg cttctccctt ccttaatcat tgattgggtt ttgaatcaat
     1321 tgcaggataa agagtcactt gggatattgc aattgctgtt acctatcata tacggtgtga
     1381 tagaaactat tgtcttatct caaaattatg ttcggaacct tgtgggcgta gctgttcgtt
     1441 ttatccaaga accatctcct ggtggttcag atcttgtgga taactctagg cgggcataca
     1501 ccatatcagc cctagtcgaa attcttcgat atctaatact tgctgttccc gatacttttg
     1561 ttgctttaaa ttgctttcca ctcccctctt gtgtggtctc aaattcaaca aatgatggaa
     1621 gtttaataac acgggtaagt ggcgaaggtg ggaagaaacg gctcgagctt cacggggctt
     1681 ccttgtccgt taaatcggtg gtctcatcag tccagaagtg ctcaatgaat cttgcaagag
     1741 ctgcaagacc cggccaaccg ggtcataatg ttgcaaaagc tgttaatgaa ttagataagg
     1801 ttttaataca tggagatatt accgttgctt acaagtgcat gtttgaagat tttagtgatg
     1861 aaacaggtga taaaaggtgg atatcagagg taagctctaa tctaagatca tctctaaaat
     1921 ggatcggtaa cgttagctcg tcattggtgt cttctgtatt gtttatttgt gagtgggcga
     1981 catgcgactt cagggatttt cgaactaacc cccctagtaa tattaagttc agtggtaaaa
     2041 gggattttac tcagatatat gttgctactc ggcttttaga gatgaagatg agaagcaagc
     2101 ataggtcaag caagtcaaaa gttggcccta aaaaagtcaa ggatctgtca catttctttc
     2161 aaagcccggg accattgcat gatattgttg tgtgctggct tgatcagcac caagcccaga
     2221 atgcagaagg tttcaaacgc gttcagttac ttataaatga actcattcga tctggaattt
     2281 tttatcctca agcatatgtg agggagctta ttgttagtgg agtcatgggt caggatgatg
     2341 cgatggttga ctttgaccga agaagaagac attataaact gctgaaaaat cttccatgtt
     2401 cgtatattca aggtgtaatc gaagaagctc aaattgctga aacatctctt gtatccgaag
     2461 ctatgcatat ctactcaaat gaacgacgtc tcttacttca tgaactttcc tgccattcga
     2521 aaaatatcaa ctctatgtcg aagcgaaaga accatcaaat gtttggatta tcaaatagaa
     2581 acatcaacag aacttcgaaa atcgacgaac tgatgaattc tatatcgatc cttctccatt
     2641 tcccaaattc cgattctacc cccactttga atggtgttga tgagtctgct tctgttaaaa
     2701 ggccagccag gccaatcgtt attagtgaag gaacacctgg atgtgaagaa tgcagacgag
     2761 caaaaagaca aaaagtcgaa gaaaaaagct cgtatatatc cgatgacgag gacatttggt
     2821 ggattaaaaa gggtagtctc aagtcattag agtcttttag acccgaacca ccggtcagac
     2881 aagtcaaaca agccacgaga ggcagacaaa aagtggtacg taagacttca agtcttgctc
     2941 aattggcagc tgccagagtt gaaagtagcc agggtgcatc cacaagtcat gtatgtgata
     3001 gtaaaataaa ctgtcctcac cacagtaacg ataacgacgt tacaaaatta acggattccg
     3061 ttaaaactgt cctttctgga gacgttgctt caattggaaa agctctgaaa cgggtgccat
     3121 ttgatgataa acgggctgtt gtggtgtggt tgatgggtat tgtgaggaaa cttgttgatg
     3181 aggctggaaa cgtaactgag actgcggcaa aagttggttc gtatggtagg gtcccacctg
     3241 ttgatgataa aggagtctca aaatggaaac ttggtgaaga tgaactgtcc aacattttgt
     3301 atttgatgga tgtttgtgac gatcttgttt ctgcagcgcg attcttaatt tggttgttgc
     3361 ctaaagttcc agtcaaccca agtccttcgg tccacggtgg gaggaacgtt atgattgtac
     3421 agcggaatgc tgaaaatcag ttgtttggtg ttggagagcc gtttatttta tcatctctca
     3481 gaaggtatga aaacatactt gctgcagctg atcttattcc tgaaacatta actgccatga
     3541 tgcatcgtac ttcggtggtt atggcttcta gtggacgggt ttctggttca atagccttag
     3601 tcttttcccg acagatgtta caaaaatacg gtcaagtagc tagtgttgtt gaatgggtaa
     3661 agaacttcaa aacaacagct gataaaagac ttgtgatgga acttgaatct ggaagatcat
     3721 cagatggaga attcggtttc ccactcggcg ttcctgcagg cgttcaagat ttcgatgact
     3781 ttttacttaa gaaaataagc aatgttcgca tttcgagggt tggtttgagt atgcgggata
     3841 ccgttcagag actcgtcgat gaggctattt ccgcctttta tggtcaagaa aagaagtctt
     3901 ttgtaggtag ctcgttgaaa agaccaagtg ttgagaaatc agatgacggg ttttcgatag
     3961 ctcaacaggt tgtaaaaggg ctattagatt gcatgagaca aaccggtggt gcagcccaag
     4021 aaggcgaccc aactttagtg gcatttgctg tttctgctat tgttactaat gttgggcaag
     4081 tgattgctaa aattcctgaa atgaccccgc tttcgttaaa ctttgcgcga cacatcctac
     4141 gaattcatct tacgtgtctc tctctactaa aagacgcact cggagaacgt caaagtcggg
     4201 tttttgaaat cgcgatcgca accgaagctt cctcttcttt agcccaagtg tttgcccctc
     4261 caaaggcctc tcgtggtcag ttacaacttt cacccgaacg tgatcccatg tctaccgaca
     4321 actctaaaac gacgttttct aaaactgcta aaataactgg tgcgatatct gcacttgtta
     4381 ttggggccgt tcttcagggt attgctagcc ttgagcggat ggtaacggtt ctaagattaa
     4441 aagaagggct aaacgtgatt caattcgtaa agagcactcg gtcaaactca aacgggaatg
     4501 ctcgatctat tggcgattca aaaatcgata attcggctga agtttcggtt cattggttta
     4561 gggttcttgt tgggaactgt aggactgttt ctgatggatt tatagttgag cttttgggtg
     4621 aatcttccat tgtagcatta tcaaggattc aacgaatgct tcctattaag cttgtttttc
     4681 cgcccgcttt tgctattttt gggtttttag tatggaaaag gttcattgtt aatgcaaatg
     4741 ttgcggcccg tgacaacgtt tcccaattgt ttcagtcttt aaccatttct atttccgatg
     4801 ccataaagca tttgcctttc cgtgatgtgt gtctcagaga atgtgctacg ttatacgata
     4861 tcgtatctgc cgatactact gacgccgagt ttgccggcat gctggactta agtgggcccg
     4921 atatgcattc aaagctcgcc gcttttgtcc ctttacgagc ccgaaccttt ctaaattcca
     4981 ttattgattg tcatttgcca catgaaattc ttcttcacga tgatggtata cgggccgagt
     5041 taaacgagat gaagcttctc gataagcttg tacatgtcct ggacaccttg cagcccgcta
     5101 agtttcattg gcaatgggtt gagctccggt tattactaaa tgagcaagcc gtaattgaaa
     5161 aagtagaagc tcgggacgct tcgttagtag atgctttacg ctcgtttgca ccaaataatg
     5221 aaaatttagg gacttcggaa aatgaaaata acttcattca gatgctattg acccggttat
     5281 tggtcagacc cgatgctgct cctctttttt ctgaggtggt gcaccgtctt ggtaggtcat
     5341 tagaggacga agttctgcag caagcaaaat ggttccttag aggtcacgat gtcctctttg
     5401 gtcgaaaatc aattcggcaa cggctaatta atatttccga gagcaaaggt ttgtcaacca
     5461 agattcagtt ttcaaaacca tggggttggt gtaattcctc ttctgatggg cctgggcccg
     5521 ggcccacaaa aaagaaaaat aagaggaagt ttgagatggt gtctattgaa gaaggtgagg
     5581 tagttgacga tggaaatgga accgacacaa aacgacagtc tagaaagttc agtcaagttt
     5641 cagatgttga agcttttata gtcggtcaac aacacgtgac ggaaaaagca ttggttgaat
     5701 ttcttcttcc gtgcatagat cagagctctg atgactcgcg ggttactttt gctagtgatt
     5761 taattaagca gatgaatgaa atagagcagc agataagtat ggttactcat ggagtcacta
     5821 ataagccgac gggaacgatt gaaggtcccg tgactaaagg gaatacgcga aagggtataa
     5881 gaggtggcag tcctggattg gctagacgtc ctgcgggacc cgttgaaatg atgcctcctt
     5941 caccttcagc gttgcgtgct tcattgttat tgcgtttgca gctactccta agattgctcc
     6001 ctgtaatctg tgctgatggg gagccatcag cccgtaacat gaggcacatg cttgcttctg
     6061 tggttgttcg tttacttgga agtagggttg ttcacgagga tgcagatctt tctaacccag
     6121 ttttaagcca tcagctcggt gagagtctct ttgatcgttt attactggtg ctgcatgcgt
     6181 tgttgagcgg ctcccagccc tactggctca ggccaaagtc tatttccaag tcaacacctg
     6241 aaggtaccag ggactcaact ctatatgatc gtgatgtcgc tgaaagcttg cagaatgagt
     6301 tggataacat gcaactaccg gatgcagtca gatggcggat tcagaccgcc atgccgtttg
     6361 ttttctcttc tgtgagagtc tcaatttctt gccagccccc gattgtcccc cctcaagctc
     6421 tcggttttct tcaaccaagc atcatatcgg ctcctggacc acttccttta agttttagaa
     6481 acaatcaaat ttcttcatca cgcagcagca tctcaaatgg gccaggaaag gccaccaagc
     6541 cagtgttctc acaacccgaa tctgatcaag agattattga cccatggaca cttttggagg
     6601 atggagcagg atcaggccca tcttccataa acgcagctgc aatcgcagga agtgatcatg
     6661 ctaatctgaa ggcatcaagc tggctcaagg gtgcggttag ggtgaggaga atggatttaa
     6721 cttatattgg tgctatagat gatgacagct gataataata actttccaaa cgtcaaagtc
     6781 aaaccctggt tcaggtaatc attaacttgt aaaattacca ttttggggtc agggtcacga
     6841 tccgggtcag cctcaatctc ctgctcttgt tgttctaaca tgacaatgaa aggtttttgg
     6901 ggctcatcat attcttttgt gggcatggtt agccgggaat tgacaacgaa catccagatg
     6961 cacattcctt tggctaattt ggctcggacc tggcttgatg actaacccct tggactttag
     7021 tgggctcagt cctgaaccct cccatggttc ggagatttgt tgtatatata ggggtgaata
     7081 tctgagcgac gaaaatgtca aaagaaagac ggaatgatct gtagtctctt gtctgttttc
     7141 ttggcccctt ctctcacata cttgtgtatt attataatta aaattattgt taattactat
     7201 tattattata ttattattat tgtttgctca tggaagtatt atgaggaagt tgataccttt
     7261 atttttctta cggttagaat agtccttcct agagcaataa atttacacag acttgtatct
     7321 caattagtaa aagtagttgt atcctgcttt ggatttgatt a
//
LOCUS       XM_071829650            2246 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAD-dependent malic enzyme
            59 kDa isoform, mitochondrial-like (LOC139839556), mRNA.
ACCESSION   XM_071829650
VERSION     XM_071829650.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2246
                     /gene="LOC139839556"
                     /note="NAD-dependent malic enzyme 59 kDa isoform,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 19 Proteins"
                     /db_xref="GeneID:139839556"
     CDS             138..1976
                     /gene="LOC139839556"
                     /codon_start=1
                     /product="NAD-dependent malic enzyme 59 kDa isoform,
                     mitochondrial-like"
                     /protein_id="XP_071685751.1"
                     /db_xref="GeneID:139839556"
                     /translation="MWRRTVARSASAAALNLRQLRRLSIVAPMTPTPGPCIVHKRGAD
                     ILHDPWFNKDTGFPMTERDRLGLRGLLPPRVISFEQQYDRFMESFRSLEHNTEGQPLS
                     VVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGM
                     YFSAKDKGEMMSMIYNWPANKVDMVVLTDGSRILGLGDLGVQGMAIPIGKLDMYVAAA
                     GINPQRVLPIMLDVGTNNQKLLDNPLYIGLRQPRLEGEEYISVVDELMEALHARWPKA
                     VVQFEDFQFKWAFETLERYRKKICMFNDDIQGTAGVALAGLLGTVRAQGRPLSDFANQ
                     KVVVVGAGSAGLGVLNMAYQAVGRMAGTDAKPQFFLIDKNGLITSKRVGIDSAAASFA
                     KDIREVESLGLHEGSDLLEVVQKVRPHVLLGLSGVGGIFDEHVLKAMRNSDSPKPAIF
                     AMSNPTLNAECTAADAFKHAGENIVFGSGSPFENVDLGNGKVGHVNQANNMYLFPGIG
                     LGSLLSGAHIISDGMLQAASECLASYMTDEEIQRGRLYPSIDSIRHITAEVGTAVVRT
                     AVAEGLAEGHGEVGPRELEHMSKEETVEYVTSNMWYPIYSPLVHEK"
     misc_feature    144..1964
                     /gene="LOC139839556"
                     /note="NADP-dependent malic enzyme; Provisional; Region:
                     PLN03129"
                     /db_xref="CDD:215594"
ORIGIN      
        1 aatttttcaa ctgaaacaac cttccttctg acgatttcac ccaatacata cagaatctct
       61 gtatctatat gtatacacac tactacgcaa cttacacctt gtgaatattt ttgatctgta
      121 ccgttcgatt tactgaaatg tggcggagaa cggttgctcg atctgcctct gcggctgcgt
      181 taaatctccg gcaattgcgg aggttgtcta tcgtagctcc gatgactccg actcctggtc
      241 cttgtattgt tcataaacgt ggcgctgata tccttcatga tccatggttt aataaggata
      301 ctgggtttcc catgacagaa agagaccgac ttggacttcg tggtctcctc cctcctcgtg
      361 tcatatcatt tgagcagcaa tatgatcgat ttatggaatc attccgatcg ttggaacata
      421 acacagaagg ccagcctctg agtgttgtat cgttggcaaa atggagaatc ttaaatagac
      481 tacatgacag gaatgagaca ttatattacc gagtacttat tgataacatt aaagattttg
      541 cgcctataat atacacgcca accgttgggt tggtgtgtca aaactattca ggattgttta
      601 gacgtccacg tggaatgtac tttagtgcaa aagataaggg agagatgatg tccatgatct
      661 acaactggcc agctaataag gttgacatgg tagttcttac agatggcagc cgtattcttg
      721 gtctgggtga tcttggagtt caaggaatgg caattcctat tgggaaactt gatatgtatg
      781 ttgctgctgc cggtatcaat cctcaaagag tccttccaat tatgcttgat gtaggaacca
      841 acaaccagaa gctactagat aacccccttt atataggact acgacaacct agattggaag
      901 gagaggagta tatatcggta gtggatgaat taatggaagc tcttcatgca cgttggccaa
      961 aagctgttgt ccagtttgaa gactttcaat tcaagtgggc ttttgaaact cttgaaagat
     1021 accgtaagaa gatctgcatg ttcaatgatg acatacaggg aactgctggt gtcgcattgg
     1081 ctggattact tggaactgtt agagcacaag gccgtccatt atcagacttc gcaaaccaaa
     1141 aagttgttgt tgttggagct ggcagtgcag ggcttggtgt tcttaacatg gcctatcagg
     1201 cagtcgggag aatggcggga acagatgcaa aacctcagtt tttcctgatt gataaaaatg
     1261 gtttgatcac aagtaagaga gttggtattg actcagcagc tgcatcattt gccaaagata
     1321 tcagagaggt tgaaagccta ggactccatg aaggatctga tcttcttgaa gtggtacaaa
     1381 aggtcaggcc tcatgttctt ctcggtttgt ctggagttgg aggtattttt gatgagcatg
     1441 tgcttaaagc catgcggaac tccgactctc ctaaacctgc tatattcgcc atgtcaaatc
     1501 ccacattgaa tgctgaatgt actgctgctg atgctttcaa acatgccggt gaaaatatag
     1561 tatttggaag tggaagccct tttgaaaatg ttgaccttgg aaacgggaaa gtaggtcacg
     1621 tgaatcaagc aaacaacatg tacctcttcc caggaatcgg tttgggatct ttactctctg
     1681 gtgctcatat tatatccgat ggaatgttgc aagccgcgtc tgaatgtctt gcttcttata
     1741 tgacagacga agaaatccaa aggggcagac tgtatccatc tattgatagt atacgacata
     1801 ttactgctga agtaggaaca gcagtggttc gaacagctgt tgctgaggga ctagctgaag
     1861 gacatggtga ggtcggtccg agagagcttg aacatatgtc aaaggaagag actgttgaat
     1921 atgtaacatc caacatgtgg tatcctattt acagtcccct tgttcatgaa aaataaggcg
     1981 tgttcagtcg tgcagtgcag tgcagtgagg ttattcttct gcagagggta ttatgtctct
     2041 agcatcatat aattaaaatt atcatctaca atttaagaca taattttatt gattgcggat
     2101 taaattccac gctctatttc ctatactggt gtatcacgaa gttatgacct ctgttttttg
     2161 taaaagagaa caactgtaat gaaatgtaac ttccatattc gaaattgtaa ctcaaacatc
     2221 ttattgttgg ttgaaggtca gtagag
//
LOCUS       XM_071829651            1214 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYB17-like (LOC139839557), mRNA.
ACCESSION   XM_071829651
VERSION     XM_071829651.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1214
                     /gene="LOC139839557"
                     /note="transcription factor MYB17-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 67 Proteins"
                     /db_xref="GeneID:139839557"
     CDS             144..1046
                     /gene="LOC139839557"
                     /codon_start=1
                     /product="transcription factor MYB17-like"
                     /protein_id="XP_071685752.1"
                     /db_xref="GeneID:139839557"
                     /translation="MGRAPCCEKTGLKRGPWTQEEDQLLVDYINKNGHGSWRSLPKLA
                     GLLRCGKSCRLRWTNYLRPDIKRGPFSPEEEKLVIQLHAILGNRWAAIAAQMPGRTDN
                     EIKNLWNTHLRKRLLSIGIDPQTHEPTTISSSLVGPLKRPPASPSTRHMAQWESARLE
                     AEARLSMESSLLLASSSPLPPNKRSTNNDYFLRIWHSEVGNSFRNIKSEKLIACSSPA
                     SQASVSGMTIEMGPKPDVEHSSSYPEPEPEPESKPEHKSVHLFAGFTHSSSSNEVEES
                     SDTALQLFFDFQGQNDTSFLEAHF"
     misc_feature    144..>620
                     /gene="LOC139839557"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03091"
                     /db_xref="CDD:215570"
ORIGIN      
        1 aacacctaat tccaaatgcg ttgagtattg gaaagtatga tatagaccgt cattcctttg
       61 cctcgtgacg ccttctctac cctcctgcat acgaaaggac cttcggctaa gtctagttta
      121 aagttttgat tcataaagaa aaaatgggaa gagcaccttg ctgtgagaaa acaggactaa
      181 aaagaggtcc atggacacaa gaagaagatc aacttttagt tgattacatc aacaaaaatg
      241 gtcatggtag ctggcgttct ctacctaaac tcgccggtct actccggtgc ggaaagagtt
      301 gtcggcttcg atggacaaac taccttcggc cagatatcaa acgcggtcca ttcagccctg
      361 aagaagaaaa gctagtaatc cagctgcatg ccattcttgg caaccgatgg gctgcaattg
      421 ctgcccaaat gcctggaaga acagataacg agatcaagaa tctatggaac actcacttga
      481 gaaaacgcct cttatcaata ggcattgacc cgcaaactca tgaaccaacc actatatcct
      541 cttctttagt aggcccacta aaacggcctc cagcctcacc ttcaactcgc cacatggcgc
      601 aatgggagag cgccaggctg gaggccgaag cgcgactctc aatggagtcg tcgctacttt
      661 tagcctcgtc atcacctcta ccacctaaca aaagaagcac caacaatgac tattttctac
      721 gcatttggca ttcggaagtt ggaaactcat ttagaaacat caaaagcgaa aaactaattg
      781 cttgttctag tccggcttca caagcttcag tttcagggat gactatagaa atggggccca
      841 aaccagatgt tgaacactcg tcaagctatc cagaaccgga acctgaacca gaatcaaaac
      901 ccgaacacaa aagtgtgcac ttgtttgctg gattcacaca ttcatctagc tcaaatgaag
      961 ttgaagaatc atctgatact gcactgcaat tgtttttcga tttccagggc caaaatgata
     1021 cgagtttttt agaagctcat ttttaactag aggtaattag gtgttagttt aatagtttct
     1081 atgaatgaag attggatgtt tgaccttgaa ttcttcattg ggttgtaatt taatatatat
     1141 ttactaaact tgctaaacct gaagtctttt gagcagcagc agtgcagcac cctagtccct
     1201 atgtatgata ttta
//
LOCUS       XM_071829652             715 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides LIM domain-containing
            protein PLIM2c-like (LOC139839558), mRNA.
ACCESSION   XM_071829652
VERSION     XM_071829652.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..715
                     /gene="LOC139839558"
                     /note="LIM domain-containing protein PLIM2c-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839558"
     CDS             1..594
                     /gene="LOC139839558"
                     /codon_start=1
                     /product="LIM domain-containing protein PLIM2c-like"
                     /protein_id="XP_071685753.1"
                     /db_xref="GeneID:139839558"
                     /translation="MGFGGTIDKCNACDRIVHFVDLMTVDNVIYHTNCFKCTHCKGTL
                     VMSNYSSMDGILYCKTHFEQLFKETGNFNKHFPTSKLNRDNSTTISPNKFSFFFSGTQ
                     DKCRVCDKTVHFVEKVTMEGEPYHKRCFRCAHGGCPLTQSSYAAINDILYCRHHFAQL
                     FMEKGSLSHVLEAVNRKKNTKDVDAINEANQAEESES"
     misc_feature    16..204
                     /gene="LOC139839558"
                     /note="The first Lim domain of pollen specific protein
                     SF3; Region: LIM1_SF3; cd09440"
                     /db_xref="CDD:188824"
     misc_feature    order(28..30,37..39,91..93,100..102,109..111,118..120,
                     172..174,181..183)
                     /gene="LOC139839558"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:188824"
     misc_feature    313..495
                     /gene="LOC139839558"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; Region: LIM; cl02475"
                     /db_xref="CDD:413332"
     misc_feature    order(313..315,322..324,376..378,385..387,394..396,
                     403..405,457..459,466..468)
                     /gene="LOC139839558"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:259829"
ORIGIN      
        1 atggggtttg gtggaacaat tgacaaatgc aatgcttgtg acagaattgt tcatttcgtt
       61 gatttgatga ccgttgataa cgtcatttat catactaatt gtttcaagtg cacccattgc
      121 aaaggcactc ttgtgatgag caactattca tctatggatg gaattctcta ttgcaagact
      181 catttcgaac aacttttcaa agaaacggga aatttcaaca aacattttcc tacatcaaag
      241 ctaaataggg acaactcaac gacaatctca ccaaacaagt tctcattttt cttctcgggc
      301 acccaagaca aatgtcgagt ttgtgacaaa actgttcatt ttgttgaaaa ggtaactatg
      361 gaaggtgaac cgtaccacaa acgatgcttc agatgtgctc acggagggtg tccattaacg
      421 caatcgtctt atgcagccat caatgatatc ctttactgca gacaccattt tgctcaactc
      481 tttatggaaa aaggcagtct ctctcacgtt ctcgaggctg taaaccgcaa gaaaaataca
      541 aaagatgttg atgcaattaa tgaagccaac caggctgaag aatctgaatc ttaaactatt
      601 tgtcacacat cttgagttac ttgtttatat catctgaaag atatatggtt tgttgttctt
      661 tatcaatagt tcatgaacgg atcgtatgaa aatatgaaaa tgaaatcgaa agttc
//
LOCUS       XR_011756982             462 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839559), ncRNA.
ACCESSION   XR_011756982
VERSION     XR_011756982.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139839559"
                     /note="uncharacterized LOC139839559; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839559"
     ncRNA           1..462
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839559"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839559"
ORIGIN      
        1 ttgataaata agcttaacaa gtgaaacaca taagatttgt gtacaaatag atcgacgaac
       61 aagaaaatgg aagtgtagag gtacgtaccg gcgagtttag gtagagaacg ccagctacca
      121 tgaccatttt tgttgatgta atcaactaaa agttgatctt cttcttgtgt ccatggacct
      181 ctttttagtc ctgttttctc acagcaagca ataattatag agagagagtt tgaggctcat
      241 taatgtcaaa agaaatatgg agaaaagaca tgtcaatcca agaatcaaaa attcaggagg
      301 gtagagaagg cgtcacgagg caaaggaatg acggtctata tcatactttc caatactcaa
      361 cgcatttgga attaggtgtt gttgtcggcg gtggattcat taattttttt cgacgggtgt
      421 aaaatgttag aaatgttaaa aaacaaaaaa tatgggcaaa at
//
LOCUS       XM_071829653             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin-conjugating enzyme
            E2 7 (LOC139839560), mRNA.
ACCESSION   XM_071829653
VERSION     XM_071829653.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139839560"
                     /note="ubiquitin-conjugating enzyme E2 7; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139839560"
     CDS             130..636
                     /gene="LOC139839560"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 7"
                     /protein_id="XP_071685754.1"
                     /db_xref="GeneID:139839560"
                     /translation="MASPSQASLLLQKQLKELCKNPVDGFSAGLVDESNLFEWSVTII
                     GPPDTLYDGGFFNAIMTFPQNYPNSPPTVRFTSEVWHPNVYSDGKVCISILHPPGDDP
                     NGYELSSERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRDRRDEFRKKVGRC
                     VRKSQELM"
     misc_feature    187..609
                     /gene="LOC139839560"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 G1 and related
                     proteins; Region: UBCc_UBE2G1; cd23795"
                     /db_xref="CDD:467415"
     polyA_site      804
                     /gene="LOC139839560"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tattgtattg tattgtatgt attgtaaatc aatcaatcaa acaagggctt acgctaacat
       61 tcattttcgt tgaattttgc cctttcaatt tcctcacatc ggcctccatt cttttatctt
      121 ctatcttcca tggcatctcc atctcaagca agtctccttc ttcagaaaca actcaaagag
      181 ctttgtaaaa accctgttga tggattctcc gctggtcttg ttgatgaaag taatttattt
      241 gaatggagtg tcactattat cggaccgcct gatacattat atgatggtgg attttttaat
      301 gctataatga ccttcccaca aaattatcca aacagccctc caactgtaag atttacctca
      361 gaggtttggc atccaaatgt ttactctgat ggcaaggtct gtatatcgat tcttcatcca
      421 cctggtgatg atcctaatgg ctatgagctt tcaagtgagc gctggacacc agttcatacg
      481 gtagagagca tagtcttgag cattatatca atgctttcta gccctaacga cgaatcacct
      541 gctaatgtgg aggccgcgaa agaatggaga gacagaagag acgagttcag gaagaaagtt
      601 ggccgatgtg tgagaaaatc acaagaactt atgtgaaacc gaactggcga gtccttatcg
      661 cggatctggc ccttgtggat ttgccatgtt acgcatctta tttcatatat tcgttttaca
      721 ctcttgtttt gcttttgttt acgtatgtta tgatgacttg tgaaacagag ttctaaaaaa
      781 tgtcattatt cggacatttt ttta
//
LOCUS       XM_071829654             830 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides actin-depolymerizing factor
            2-like (LOC139839561), mRNA.
ACCESSION   XM_071829654
VERSION     XM_071829654.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..830
                     /gene="LOC139839561"
                     /note="actin-depolymerizing factor 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 77 Proteins"
                     /db_xref="GeneID:139839561"
     CDS             132..551
                     /gene="LOC139839561"
                     /codon_start=1
                     /product="actin-depolymerizing factor 2-like"
                     /protein_id="XP_071685755.1"
                     /db_xref="GeneID:139839561"
                     /translation="MANAASGMAVHDECKLKFMELKAKRTFRFIIYKIEEKQKQVIVE
                     KLGEPAETYDAFSACLPADECRYAVFDYDFLTPEGVQKSRIFFIAWSPDTARVRSKMI
                     YASSKDKFKRELDGIQVELQATDASEVGLDVIQSRAS"
     misc_feature    147..545
                     /gene="LOC139839561"
                     /note="Cofilin, Destrin, and related actin depolymerizing
                     factors; Region: ADF_cofilin_like; cd11286"
                     /db_xref="CDD:200442"
     misc_feature    147..152
                     /gene="LOC139839561"
                     /note="putative G-actin interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:200442"
     misc_feature    order(375..377,381..383,423..425,504..506,513..515)
                     /gene="LOC139839561"
                     /note="putative F-actin interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:200442"
     polyA_site      830
                     /gene="LOC139839561"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtaaaacata tgcccaaatc taaagggaaa ggcagaaaca ggtcttctca ttcaccgcaa
       61 aaacctactc tacacaaact tgtcaatcgg agccctaaat tctatcccgt cgttcttctc
      121 cgcctgaaat catggccaac gcagcatcag gaatggctgt gcatgatgag tgcaagctaa
      181 agtttatgga attaaaggca aaaaggacct ttcgcttcat catttataag attgaagaga
      241 agcagaagca ggtgattgta gaaaagcttg gcgaaccagc tgagacttat gatgctttct
      301 cagcatgctt acctgctgat gaatgtcggt atgcagtctt tgattatgac tttttgactc
      361 cagaaggtgt tcaaaagagc agaattttct tcatcgcatg gtctccggat actgcaaggg
      421 tgaggagcaa gatgatttat gcaagttcca aggacaagtt taagagagag cttgatggta
      481 ttcaggtgga gttgcaagca acagatgcta gtgaagttgg gcttgatgtt attcaaagcc
      541 gagcaagtta aagctctgcg taaatatcaa tggtgatgcc catgttcttc atttatgtta
      601 aatgtctata gtgtccctgg tatgtagatc aatgatgaat ggctggcgta ccggatggat
      661 tttactcttc aagaactagt atggtggttt aaggtaaaaa ttgtgcaatg tttgtgtgat
      721 ctaacagaag caatatgaat ttgtactgta tttcaatttg atttctgttt atggattttg
      781 ctttgcttgg ccttgcccat ggaatgacca tttgtattta ctttgatttc
//
LOCUS       XM_071829655             748 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides actin-depolymerizing factor
            2-like (LOC139839562), mRNA.
ACCESSION   XM_071829655
VERSION     XM_071829655.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..748
                     /gene="LOC139839562"
                     /note="actin-depolymerizing factor 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 78 Proteins"
                     /db_xref="GeneID:139839562"
     CDS             112..531
                     /gene="LOC139839562"
                     /codon_start=1
                     /product="actin-depolymerizing factor 2-like"
                     /protein_id="XP_071685756.1"
                     /db_xref="GeneID:139839562"
                     /translation="MANAASGMAVHDECKLKFMELKAKRTFRFIIYKIEEKQKQVIVE
                     KLGEPAETYDAFSACLPADECRYAVFDYDFLTPEGVQKSRIFFIAWSPDTARVRSKMI
                     YASSKDRFKRELDGIQVELQATDASEVGLDVIQSRAS"
     misc_feature    127..525
                     /gene="LOC139839562"
                     /note="Cofilin, Destrin, and related actin depolymerizing
                     factors; Region: ADF_cofilin_like; cd11286"
                     /db_xref="CDD:200442"
     misc_feature    127..132
                     /gene="LOC139839562"
                     /note="putative G-actin interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:200442"
     misc_feature    order(355..357,361..363,403..405,484..486,493..495)
                     /gene="LOC139839562"
                     /note="putative F-actin interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:200442"
     polyA_site      748
                     /gene="LOC139839562"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgcccaaatc taaacacgac ttatcattta cagcaaaaac ctactcaaca gatacttttc
       61 aatcagagcc ctaaattttc tcccatcgtt cgttcttctc cgcctgaaat catggccaac
      121 gcagcatcag gaatggctgt gcatgatgag tgcaagctaa agtttatgga attgaaggca
      181 aaaaggacct ttcgcttcat catttataag atcgaagaga agcaaaagca ggtgattgtg
      241 gaaaaacttg gagaaccagc cgagacttat gatgctttct cagcatgctt accagctgat
      301 gaatgccgat acgccgtctt tgattacgac tttttgacgc cagaaggtgt tcaaaagagc
      361 aggattttct tcatcgcatg gtctccggat actgcaaggg tgaggagcaa gatgatttac
      421 gcaagttcca aggacaggtt taagagagag cttgatggta ttcaggtgga gttgcaagca
      481 acagatgcta gtgaagttgg gctcgatgtt attcaaagcc gagcaagtta aagctctgca
      541 taaatgagat tcccctgttc ttcatttatg tttaatgttt atattgtctc tggtatgtag
      601 attactgatg aatgactcgc gtaccgggcg gattttattt ctcaagaact agtgttgtgg
      661 tttaaggtaa aaattatgtg atatttgtgt gatttaacag aagtaatatg aatttgtact
      721 gtatttcaat ttgatttcct tttatgga
//
LOCUS       XM_071829656            1185 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyubiquitin
            (LOC139839563), mRNA.
ACCESSION   XM_071829656
VERSION     XM_071829656.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1185
                     /gene="LOC139839563"
                     /note="polyubiquitin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 100 Proteins"
                     /db_xref="GeneID:139839563"
     CDS             79..996
                     /gene="LOC139839563"
                     /codon_start=1
                     /product="polyubiquitin"
                     /protein_id="XP_071685757.1"
                     /db_xref="GeneID:139839563"
                     /translation="MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
                     FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV
                     KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
                     TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
                     LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK
                     QLEDGRTLADYNIQKESTLHLVLRLRGGF"
     misc_feature    79..306
                     /gene="LOC139839563"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     Region: Ubl_ubiquitin; cd01803"
                     /db_xref="CDD:340501"
     misc_feature    order(94..105,109..111,178..189,196..198,202..204,
                     208..210,214..225,280..306)
                     /gene="LOC139839563"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    order(100..114,169..183,196..198,202..204,208..210,
                     214..225,280..282,286..306)
                     /gene="LOC139839563"
                     /note="E1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    307..534
                     /gene="LOC139839563"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     Region: Ubl_ubiquitin; cd01803"
                     /db_xref="CDD:340501"
     misc_feature    order(322..333,337..339,406..417,424..426,430..432,
                     436..438,442..453,508..534)
                     /gene="LOC139839563"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    order(328..342,397..411,424..426,430..432,436..438,
                     442..453,508..510,514..534)
                     /gene="LOC139839563"
                     /note="E1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    535..762
                     /gene="LOC139839563"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     Region: Ubl_ubiquitin; cd01803"
                     /db_xref="CDD:340501"
     misc_feature    order(550..561,565..567,634..645,652..654,658..660,
                     664..666,670..681,736..762)
                     /gene="LOC139839563"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    order(556..570,625..639,652..654,658..660,664..666,
                     670..681,736..738,742..762)
                     /gene="LOC139839563"
                     /note="E1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    763..990
                     /gene="LOC139839563"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     Region: Ubl_ubiquitin; cd01803"
                     /db_xref="CDD:340501"
     misc_feature    order(778..789,793..795,862..873,880..882,886..888,
                     892..894,898..909,964..990)
                     /gene="LOC139839563"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    order(784..798,853..867,880..882,886..888,892..894,
                     898..909,964..966,970..990)
                     /gene="LOC139839563"
                     /note="E1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     polyA_site      1185
                     /gene="LOC139839563"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aactcattac aatcaatcaa tctcttaata aatcctaaat tttcatctcg tagttttcat
       61 caatcaattt tctcgaagat gcagatcttt gtaaagacac tcactggtaa gacaattact
      121 ctcgaagtcg agagctcaga taccatcgac aacgttaagg ccaagatcca agataaggaa
      181 ggaatcccac cagaccagca aaggctcatc tttgctggta agcaacttga agacggccgt
      241 acattagctg actacaacat tcaaaaagaa tccacactcc accttgttct cagattgaga
      301 ggtgggatgc aaatcttcgt taagaccttg acaggaaaga ctatcacttt ggaggtcgaa
      361 agctccgaca cgattgacaa tgtcaaggcc aagattcaag ataaggaggg tatcccacca
      421 gaccagcaga ggctgatatt cgcaggaaaa cagcttgaag atggccgaac tcttgctgat
      481 tacaacattc agaaagagtc aactcttcat ttggtccttc gtctgcgtgg tggtatgcag
      541 atctttgtta agaccttgac tgggaagact atcacgttgg aggttgaaag ctcggacaca
      601 atcgataatg tgaaagcgaa aattcaagat aaggagggca taccaccaga ccagcagagg
      661 cttattttcg ctggtaaaca gcttgaagat ggcagaacct tagccgacta caatattcag
      721 aaggagtcaa ctcttcatct cgttcttcgt ctgcgtggtg gtatgcagat attcgtgaag
      781 accttgaccg ggaaaactat aactttggaa gtggagagtt cggatacgat cgataacgtg
      841 aaggctaaga ttcaagataa agaagggata ccaccagatc agcagaggtt gatctttgcc
      901 ggaaaacagt tagaagatgg tcgaactctg gctgattaca acattcagaa ggaatcgact
      961 cttcatcttg tgcttcgtct tcgtggggga ttttaagttt cttatgttgt ttggtggtta
     1021 ttatttgttt gtgtgaacaa ctgatttgtt gtttcttgct gtttatgctg tgttgaatga
     1081 atgaaacgtt aattgtggtg tttgtaatac ttgttggact tgttcttgat tatctgtttt
     1141 agtcatggaa tgttaatgat cagcttataa ttgatatgaa ttgaa
//
LOCUS       XM_071829657            9159 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BEACH domain-containing
            protein C2-like (LOC139839564), transcript variant X1, mRNA.
ACCESSION   XM_071829657
VERSION     XM_071829657.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9159
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9159
                     /gene="LOC139839564"
                     /note="BEACH domain-containing protein C2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839564"
     CDS             112..8394
                     /gene="LOC139839564"
                     /codon_start=1
                     /product="BEACH domain-containing protein C2-like isoform
                     X1"
                     /protein_id="XP_071685758.1"
                     /db_xref="GeneID:139839564"
                     /translation="MFEQACLDRDIELDNLLKRDNKDDDSYGLHAHNNLHANHNNNHI
                     LEDIKTEILHLVDSAIMGQLESIETMKSMVSGKVDFKDGVDADSVADLLVDTLLTTMG
                     GVESFEDDDDESNNLPTVMKNSNAAIISVELLPWLPWLTDSVGFMSPRTRLVRGLRTI
                     LRSCTRNRAMCCSAGLIRVLLQTAEKIFVDNVGSTKQMKWNGAPLCSCLQYLAGHSVS
                     VTDLHTWFRLVKIMIKTSWAPRLMTSLEKALSGKDSRGPQSSFEFDGQSSGLLGPGEG
                     RWPFLNGYAFSTWIFVESFVDTLHTAINAANIPEDAELKSRIDDDRTAKMPRLFSFIS
                     SDYYGIEAYFHGHFLVVETGSGKMRKGLVYFTYAFKSQSWYFIGLEHTSNGELSLYID
                     GVLHETRPFDLPRITKPLSFFCIGTNPPPKMESLHQNSRRCPLFAEMGPIYVFKEPIG
                     PEMMRRLASRGADSLPSFGNAAGLMWLSTNAHVANIEEESAHLDADISRYLYVIYHPS
                     LLNGRHCPDASPSGPSGLLQRPAEVLGHVPVTTRMRPADALWALAYGGPMSLLPFVVS
                     KINNDTLEPEKGNLKSCLASTTLAAPIFRIISVAIQHLGNSNELCRIRGPEILSKILT
                     YLLKTLSFLDATKHKVADEEIVAAVVSLCQSQKNNATLKRHLFSTLLLDLKIWSLCSY
                     GIQKKLLSSLADMVFVESSVMHDVKAVQTLLDGCRRCYNTFHEKDSMNKISINGGPRH
                     IGEVNALVDELLVVIELLLLAAPPPMAVEHIRCLLGFLVDCPQPNQVARALHLIYRLV
                     VQPNKSRATTFAEAFISCGGIETLLVLLQREAKAGDHDVPDNDNDIYSVSGSKAESCI
                     GFPENYNTDDTGSLYGSEFSYNRNSVLGGMASSVGSQMSASESLFIKNLGGISFSISA
                     ENARNNLYNIDKSDGIVVAIIGLFGALISSGHLKFGSHASQDLAGNLNGSLEGAGAML
                     DDKVSLLHFALQKTLQAAPNRLMTGSVYTALLSASLNEAARDEELNFYNPQHRFQHLE
                     LLLILLRSLPYSTKNFQIRALQDLLILACSHSENRNSLTMMEEWPEWLLEILISTHEM
                     GVTSSSASSSINEVEDLIHNFLIIMLEHSMREKDGWKDIEATLHCAEWLSTVGGSSTG
                     EQRARRKKCMPVFKRRLLGDMLDFIARELRVQIQVIAAASPGVALYGLPPDVSKSEKD
                     NAAQYSVALMENAVVILMLVEDHLRLQSKLFCSAHFDTGSTSPFSAVQAAVSSPSANS
                     KPKKGEESSTGAALPFEDFASMVDSRGNRASTIEERLAAAAGAEPYDNVSCAFVSYGS
                     CMIDLAEGWKYRSRLWYGVGQPSKTVDFGGGGSGWDSWKSCLEKDSNGNWVEVVLVRK
                     CVNLLQALLLDEPRLVDGLGMSGDSGTGTGRMTTLYKLLDNDQPFLCMLRIILLSLRE
                     NQGNGENGIIMKNVGDRLSESLKREDESAPSSLESSPRTFMKQIGSALLWSVLSPILQ
                     VPVSESKRQRVLVASCILYSESSATMHLQVWHAVSRDRLPLRKQYLEAIVPPLVAVIR
                     RWRPLLAKIYELLPPDGPNNPLAVDDPALDADATPIESALSMITPGWAAAFASPPASW
                     ALNTMAAGTCCSENTFPTPAPINVHQKLKSFTLYERNSAKLQTHTSFQEPLEAYGTLS
                     NEKFGKSHTFSDSRGMSSVAMATSGQRRGKSDMERIMRCNVSEAMGTAWMECLQSVDT
                     KSVYGKDFNALSYKFVALLDGSFSFATNMQRSEVDRLARVDIVARRRLSTGIRAWRKL
                     IHYLIETDSLFGPLSTNLCDPKRVFWKLDYMESSSRMHRFLRRDFKGTDHFNVSAICK
                     DPIELEHDNQKATLALEALSKQLETENNEQDTVVNMEIYTDEMWLYEDIHTKPSETAK
                     QNLQVPTDSSESQLVNFQDLTQSPSAAGPSGLYEIVIIELPASMVRPLKVRHGTFQIT
                     TRRINFLVDKSEKKVEGNVDDKDRSWLIASLHQVHNRRYLLRRSALELFMLDRSNFFF
                     DFGNAEARMNAYRAIIHSRPPHLSNIYLATQRPEQLLKRTQLMERWSRWEISNFEYLM
                     QLNTLAGRSYNDITQYPVFPWVLSDYKSTHLDLANPSSYRDLSKPVGSLNEDRLKKFQ
                     EKFRSCNNPIIPKYHYDSHYSTAGTVLYYLMRVEPFTTLSIRLQGGKFEHADRMFSDI
                     GATWDRVLENTSDVKELVPEMFYLPEILTNENSVDFGTTPHGDKLDSVRLPPWANNPV
                     DFMHKHQMALESEHVSAHLHEWIDLIFGYKQQGKEAISANNVFFYVTYDGAVDIDKIQ
                     DPVQRCAVQDQVAYFGQTPSRLLAIPHIKKMPLRDVLHMQTIFRNPKEVKQYHVPSPK
                     RCNLPASAIHATSDAVVIVDTNAPSANIALHKWHPNTPDGHGTPFMFQPGKNRIKSGS
                     GGGFMRYFKGKSGSGSEEWRYPQAHAYTALAIRNSSIVSITYNNEVITGGHVDNSIRL
                     VLPDGAKTLEIARGHCAPVTCLSLSLDSKYLVSGSRDTTVLVWRIHQSPRFMSGNTSE
                     PPTGTVTPTSVSATTAASCFIDKTKRRRIEGPVQVIRGHLGEIVDCCVDSDLGAVASC
                     SYISDVLVHSVNKGRLLRRFHGVKADIVRLTKNGVVLTWNDSMHALSSYTLNGILISQ
                     VHLPFSCNISCMEISFDGRSFLVGLNSYLRKNYGEDGVGEIKRLDVQSPSVCLLDLHT
                     LKIFHTMRLEEGQDITAMTTNKDDTNLLVSTSDKQLIVYTDPTVSSRN"
     misc_feature    1696..>2607
                     /gene="LOC139839564"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     Region: DUF4704; pfam15787"
                     /db_xref="CDD:464870"
     misc_feature    5935..6207
                     /gene="LOC139839564"
                     /note="PH domain associated with Beige/BEACH; Region:
                     PH_BEACH; pfam14844"
                     /db_xref="CDD:434260"
     misc_feature    6289..7119
                     /gene="LOC139839564"
                     /note="Beige/BEACH domain; Region: Beach; pfam02138"
                     /db_xref="CDD:460459"
     misc_feature    7342..7446
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    7474..7593
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <7477..7683
                     /gene="LOC139839564"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    7588..8364
                     /gene="LOC139839564"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    7606..7836
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    7855..7953
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    7954..8055
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    8104..8262
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    8290..8358
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 gatgatgaaa aagaagtgat tggcggtgaa ccagtcgaaa catccgatgc aggacgtgtt
       61 aacacaatta accttaacaa tgtgaatatc gggactaacg atgtagatgc tatgttcgag
      121 caggcatgtt tagataggga catagagttg gataacttac taaagcgaga taataaagat
      181 gatgactcat atggacttca tgctcacaat aatcttcacg ctaatcacaa taataatcat
      241 atcttagaag atataaaaac agaaattttg catctagtgg attctgcaat tatgggtcag
      301 ctcgaaagta tagaaactat gaagagtatg gtgagtggta aagtggattt taaagatgga
      361 gtcgatgcag atagtgttgc agatttgtta gttgatacac ttcttacaac aatgggagga
      421 gttgaatctt ttgaagatga tgatgatgaa tctaataatt tgcctactgt tatgaaaaac
      481 tcaaacgctg ctataatatc agttgaactt cttccatggc ttccatggtt aaccgatagt
      541 gttgggttca tgtctcctag gacacgattg gttcgtgggt tacgaaccat actacgatca
      601 tgtacaagaa acagagccat gtgctgttca gctggtttaa ttagggttct tttgcaaaca
      661 gctgagaaga tatttgttga caatgtcggt tcaacaaagc aaatgaaatg gaacggggct
      721 ccattatgtt catgtcttca gtatttagcg ggacactcgg ttagtgtaac tgatctgcat
      781 acgtggtttc ggttggtaaa aataatgatt aaaacttcat gggctcctcg gttaatgact
      841 tctttagaaa aggcgttgag tgggaaagat tcacggggcc cacaatcttc gtttgagttt
      901 gacggtcaaa gttcaggctt gctgggaccc ggagagggcc gttggccatt tcttaacggc
      961 tatgcgtttt ccacttggat ttttgttgag tcatttgtcg acactttaca tacagcgatt
     1021 aatgctgcaa acatacccga agatgctgaa ttgaaatcac gtatagatga tgatcgaaca
     1081 gcgaaaatgc ctcggctttt tagctttata tcatcagatt attacggtat cgaggcatat
     1141 tttcatggtc actttttggt ggttgaaacc gggagtggaa aaatgagaaa aggtttggtt
     1201 tattttacgt acgctttcaa gtcacaatcg tggtatttta ttggacttga acacacttca
     1261 aatggcgaat taagtttata tatcgatggt gtgttacatg aaacccgtcc ttttgacctc
     1321 cctcgaatca ccaaaccact ttcgtttttc tgcattggaa ctaatccacc accaaaaatg
     1381 gaaagtttgc atcaaaattc acgaagatgc ccattgttcg ccgaaatggg cccgatttat
     1441 gtatttaaag aaccaattgg gcctgagatg atgaggaggt tggcttccag aggtgctgat
     1501 tcacttcctt catttggtaa tgcagccggg ttgatgtggt tatcgactaa cgcccatgtg
     1561 gcaaatatcg aagaggaaag cgcgcatttg gatgcagata tttcacgata cctttacgtt
     1621 atatatcatc ctagtttact aaacggacgt cattgtccag atgcttcccc ttctggccct
     1681 tcaggactgc tacagagacc tgcagaggtt ctgggtcatg tacctgtaac cacaagaatg
     1741 cggcccgcag atgctttgtg ggccctagcg tacggaggcc caatgtcttt acttccattt
     1801 gtagtaagta aaattaataa tgatacacta gaaccagaaa aaggcaatct taaatcatgc
     1861 ttagcttcaa caactcttgc tgctccaata tttaggatca tatcagtagc aattcaacac
     1921 ctcggaaaca gcaatgaatt atgccgtata cgtggtcccg agattttatc aaaaattcta
     1981 acatatcttt taaaaactct atcgtttctt gatgctacca aacataaagt cgctgatgaa
     2041 gaaattgttg cagcagttgt aagtttatgc caatctcaga aaaacaacgc tacgttaaaa
     2101 agacatcttt ttagtacact gttgctcgat ttgaaaattt ggagtttatg tagctacggc
     2161 atacagaaga agcttttatc atctttagcg gatatggttt tcgtcgagtc atctgtaatg
     2221 catgatgtga aagcggtaca gacacttctt gatggatgta ggagatgcta caacactttt
     2281 catgaaaaag attcgatgaa taaaatttcg attaacggtg gaccccggca cattggtgaa
     2341 gtgaatgctt tggttgatga gcttttagtg gttattgaac ttcttttgtt ggcagctcct
     2401 cctccaatgg ctgtcgaaca tattagatgt ttgcttggat tcttggttga ttgtccacaa
     2461 ccaaatcagg ttgcaagggc actgcacttg atatacaggc tggtggtaca gccaaataag
     2521 tctagagcca cgacttttgc ggaggcgttc atatcatgtg gtggtattga aacacttcta
     2581 gtcttattgc aacgggaagc aaaagccgga gatcatgatg taccagacaa cgataatgat
     2641 atctattcag tctcgggatc taaagccgaa agttgtattg gatttccgga aaattacaac
     2701 accgatgata ctggatcttt atacggaagt gaattttcat ataatcgaaa tagtgtcctt
     2761 ggtggaatgg cctccagtgt aggaagccaa atgtcagctt ctgagagtct atttataaaa
     2821 aatttggggg gcataagttt ctcaatcagt gctgaaaatg caagaaataa tttgtataat
     2881 attgataaaa gtgatggaat tgttgtggcg ataattggac tttttggggc tttaatttct
     2941 tcgggccatt taaagttcgg ttctcatgct tcacaagatc ttgcaggaaa tcttaatggt
     3001 tcgcttgaag gtgcgggtgc tatgttggac gataaagtgt cacttctaca ttttgctctg
     3061 caaaagactc tgcaagccgc accaaatagg cttatgaccg ggagcgtcta cacagctttg
     3121 ttaagtgcct cgttgaatga agcagcaagg gatgaggaac tgaactttta taatccgcaa
     3181 catcgctttc agcatttaga actcttgttg attcttttgc gttcactccc atattcaaca
     3241 aagaattttc aaattcgagc attacaggat cttttgattt tggcttgcag tcattcagaa
     3301 aacagaaaca gtctcaccat gatggaggaa tggcctgaat ggctcttgga aattcttata
     3361 tctactcatg agatgggtgt aacaagttct tcggcttctt caagcattaa tgaagttgaa
     3421 gaccttatac acaatttcct cattatcatg ttagagcact caatgcgtga aaaggatgga
     3481 tggaaggata ttgaagctac acttcattgt gcagaatggc tttcaaccgt agggggatct
     3541 agcacagggg agcaacgagc cagacgcaag aaatgtatgc ccgtctttaa gagaaggctt
     3601 ttaggtgata tgttggactt catcgctaga gagctacgag ttcagatcca agttattgct
     3661 gcagcctctc ctggtgtggc tttgtatgga ttaccacctg acgtctctaa gtcagaaaaa
     3721 gataatgctg cccagtattc tgtggcttta atggagaatg cagttgttat attaatgctt
     3781 gttgaagatc atttacgcct gcagagcaaa ctattttgct ctgcccattt tgacactggt
     3841 tcaacttctc cgttttctgc tgttcaagct gcagtttcga gtccctctgc aaactcaaag
     3901 cctaagaagg gagaggaatc gtctacgggc gctgcacttc cttttgaaga ttttgcttca
     3961 atggttgaca gtagaggtaa tcgtgcatcg acaatagaag aacgtcttgc agctgcagca
     4021 ggagctgaac cttatgacaa cgtttcttgt gcttttgtgt catacggaag ttgtatgata
     4081 gatttagccg agggttggaa atacagaagc cgattgtggt acggtgtcgg tcaaccttca
     4141 aaaacagttg actttggtgg cggtggcagt ggctgggact catggaaatc atgtttagaa
     4201 aaggattcaa atggtaattg ggtcgaagtt gtattagtaa ggaaatgtgt aaacttgcta
     4261 caagctttat tattagatga acctaggctc gtcgatgggc ttggtatgag tggcgattcg
     4321 ggtacaggga cgggtcgtat gacaactctt tataagttgt tggataacga ccagccattt
     4381 ttatgcatgc ttcgtataat actactttcg ttaagggaaa atcagggtaa cggtgaaaat
     4441 ggaataatta tgaagaatgt tggtgatagg ttgtctgaaa gtttaaaaag agaagacgaa
     4501 agtgctccgt catcgttaga aagtagtcct cgaacattca tgaagcagat tggttcagca
     4561 ctattatgga gtgtactttc gcccatcttg caagttcccg tttctgagtc caagagacag
     4621 agagtgttgg ttgcatcctg tattctatat tctgagtcat ctgctacaat gcatttgcag
     4681 gtgtggcatg cggttagccg agacagactc cctctaagga aacagtatct cgaagctatt
     4741 gtgcctccac tagtggctgt cattcgaaga tggcgccctc ttttggccaa aatttatgaa
     4801 cttcttcccc cagatggtcc aaataatcct cttgctgtag atgacccagc actagatgct
     4861 gatgcaactc ctatagagag tgcactatct atgatcactc ccggttgggc ggctgctttt
     4921 gcatctccac ctgcttcatg ggcattaaac acgatggctg ccggaacttg ttgcagtgaa
     4981 aacacatttc ctacacctgc tccaataaac gttcatcaaa agctcaaatc tttcacctta
     5041 tacgaaagaa attcagctaa acttcaaaca cacacaagct ttcaagaacc cttagaagct
     5101 tacggaacat tatctaatga aaaatttggt aaatctcata ccttttctga ttctcgaggg
     5161 atgagttcag tggctatggc tacatctgga caaaggcgag gtaaaagtga tatggaacgt
     5221 ataatgagat gtaatgtttc ggaagcaatg ggaactgcgt ggatggaatg tttgcaatcg
     5281 gttgatacaa aatcggttta cggaaaagat tttaatgcat tatcttataa atttgttgct
     5341 cttcttgatg gaagtttttc ttttgccaca aacatgcaac gatctgaggt tgatagactt
     5401 gctcgagttg atattgttgc tcgacgtcgt ctaagtaccg gtatacgtgc ctggcgcaaa
     5461 ctcatccatt acctaattga gactgacagt ctttttggac cattgagtac aaatctttgt
     5521 gatcctaaaa gagttttctg gaaattggac tatatggaaa gttcttcaag gatgcataga
     5581 tttttaagga gggattttaa gggaactgat catttcaatg tttctgcaat ctgcaaagat
     5641 cctatagaac ttgaacatga taaccaaaag gcgacgttgg ctctagaagc tctctcaaaa
     5701 caactagaaa ctgaaaataa tgaacaagat acagttgtta acatggaaat ttacactgat
     5761 gagatgtggt tgtacgaaga tattcatacg aaaccgtcag aaactgccaa acagaatctg
     5821 caggtgccaa cggattctag tgaatcacaa cttgtaaatt tccaagatct tacacaaagt
     5881 ccttcagcag cgggtcccag tggactttat gaaatagtta taattgagct tccagcatcg
     5941 atggttcgac cactaaaagt tcgacatgga acatttcaga ttactactag gagaattaac
     6001 tttcttgttg ataaatctga gaagaaagtc gaaggtaatg tagacgataa agatcgaagc
     6061 tggttgatag cttctcttca tcaagtacac aacagaaggt atctcttacg aagaagtgct
     6121 ctggaattat ttatgcttga ccgatcgaat tttttcttcg attttgggaa tgctgaggca
     6181 agaatgaatg cctacagagc tattattcac tcacgtcctc cacatttgag caatatttat
     6241 ttggcgactc agagacctga acaacttctc aaacggactc aactcatgga acgttggtca
     6301 cgttgggaga tcagcaactt tgaatattta atgcagctta acacgttggc tgggcgtagt
     6361 tataacgaca tcacccagta tccagttttc ccatgggttc tttcagatta caaatcaact
     6421 catttggatc ttgccaatcc atcatcttat cgggatcttt caaagcctgt tggatcttta
     6481 aatgaggatc ggttgaaaaa gttccaggaa aaattcagaa gctgtaacaa tcccatcata
     6541 cccaagtacc attacgattc acattactca actgccggga cagtgttgta ttatctaatg
     6601 cgagttgaac cgtttactac cctttcaatt cgactacaag gcggcaagtt tgaacatgca
     6661 gacagaatgt tttcagatat tggtgctact tgggatagag ttttggagaa cacgagcgac
     6721 gtgaaggaac tggtccctga aatgttttac cttccggaga ttttaacaaa tgagaattca
     6781 gttgattttg gtaccacgcc acatggagat aaattagatt ctgttaggct tcctccttgg
     6841 gctaataacc ctgttgattt catgcataaa catcaaatgg ctctcgagag tgaacatgtc
     6901 tccgcacatt tgcatgagtg gattgatctg atatttgggt acaagcaaca agggaaagaa
     6961 gctatttcag caaacaatgt attcttttac gtcacgtatg atggggctgt tgatatagac
     7021 aaaattcagg atccagtcca gcgatgtgct gtacaagatc aagttgctta ctttggtcaa
     7081 accccgtcac gtcttttagc aatcccacat ataaagaaga tgccacttcg ggatgttctc
     7141 catatgcaga ccatatttcg gaaccccaaa gaagtcaaac aatatcatgt tccatctcct
     7201 aaacgctgca atctaccggc atctgccatt catgcaactt cagatgctgt tgtaattgtt
     7261 gatactaatg cgccatcagc aaacattgca ttacataaat ggcacccaaa tacacctgat
     7321 ggacatggaa cgcctttcat gtttcaacca ggaaaaaata gaataaagtc aggtagtggt
     7381 ggaggtttca tgcgttattt caaaggaaaa agtgggtccg gttcagagga atggagatat
     7441 cctcaggctc atgcctacac ggctttagcg attaggaact cttccattgt ttccataaca
     7501 tataataacg aagttatcac aggtggacat gtggacaaca gtataagatt ggtattacct
     7561 gatggagcaa aaacattaga aatagcacga gggcattgtg cacccgtgac ttgtttatct
     7621 ttgtcactgg atagcaagta cctcgtgagt gggtcccgag acacaacagt tttggtttgg
     7681 agaatacacc agtcaccaag gttcatgtca ggcaacacgt ctgaaccacc cactggcaca
     7741 gtcacaccaa cttcagttag tgcaacaaca gctgcaagtt gtttcattga taaaactaaa
     7801 agaaggcgta ttgagggtcc cgtacaggtt atacgtggcc atcttggtga aattgtcgat
     7861 tgttgtgtgg attcagatct tggtgctgtt gcttcgtgtt cttatatttc agacgttttg
     7921 gttcattcgg tgaataaagg tcgattgctc agaaggtttc atggtgtaaa ggctgatata
     7981 gttaggctta caaaaaacgg ggttgtgctg acgtggaatg attcaatgca tgctctctcg
     8041 agttatactc ttaacgggat cttaatttcc caggtgcatc ttcctttttc ttgtaacatt
     8101 agttgcatgg agatttcttt cgatgggcgg agttttttgg ttggattaaa ctcatatttg
     8161 cgaaaaaatt atggagaaga tggagttggt gaaattaaga gattggatgt tcaatctcct
     8221 tccgtttgtc tccttgatct acatactctt aagatatttc acacaatgag acttgaagaa
     8281 ggacaagata taacggcaat gaccacgaac aaggacgaca ctaatctctt ggtctcaact
     8341 tctgacaaac aactcatagt ctacacagat cctactgtaa gttcacgaaa ttagtgtaag
     8401 gatacactaa tttccttttt tagtaaacat aaagacggtg ttctgacaaa gttcacgaag
     8461 atgcgtaaat atctttaaag tgaagttcac gacggtggtc agaagagaaa ggaagcggaa
     8521 ttatagggtt gccatgggga aaacgtcgat caaggaggag ctttgcaagt gtttcaagtg
     8581 acgatgaata gcatttttcg aatagcgata aattttctta cccacttcgc ccaagttaga
     8641 ggtaaatggt attttgccag tttaaacatg atcaaaactt tggtattata atgttgacca
     8701 ttgacctcta tatgttgttc ttgttccgta tatgattttg gattatatat ggtgtggatc
     8761 atatgctaat ttatgctaat tgcaagagtt gaccaaaaga gagagttggc ttgtttcttg
     8821 agttaagata cttggatttt gaacttcaga ctggtgtcat cgcgtgatat atttccctcg
     8881 gcccagtaca tatcaatcaa ttgcaatgta ttagatgaac actagagagc tgttatgcaa
     8941 aacattcaat tttgactttg accatgtaaa tttgaagcca ccatgaagtg gcccttaggc
     9001 ttgtacattt tagcgctgat ttattatggt gtaatactac atgttgtact gttatgtgtt
     9061 agaaatgaac aaggttagtg tcgttggtat tcaagacgaa tttgagttcc aagttgtttc
     9121 atattgttga tcctatcaaa tacaaatata gaagatctg
//
LOCUS       XM_071829658            9135 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BEACH domain-containing
            protein C2-like (LOC139839564), transcript variant X2, mRNA.
ACCESSION   XM_071829658
VERSION     XM_071829658.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9135
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9135
                     /gene="LOC139839564"
                     /note="BEACH domain-containing protein C2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839564"
     CDS             112..8370
                     /gene="LOC139839564"
                     /codon_start=1
                     /product="BEACH domain-containing protein C2-like isoform
                     X2"
                     /protein_id="XP_071685759.1"
                     /db_xref="GeneID:139839564"
                     /translation="MFEQACLDRDIELDNLLKRDNKDDDSYGLHAHNNLHANHNNNHI
                     LEDIKTEILHLVDSAIMGQLESIETMKSMVSGKVDFKDGVDADSVADLLVDTLLTTMG
                     GVESFEDDDDESNNLPTVMKNSNAAIISVELLPWLPWLTDSVGFMSPRTRLVRGLRTI
                     LRSCTRNRAMCCSAGLIRVLLQTAEKIFVDNVGSTKQMKWNGAPLCSCLQYLAGHSVS
                     VTDLHTWFRLVKIMIKTSWAPRLMTSLEKALSGKDSRGPQSSFEFDGQSSGLLGPGEG
                     RWPFLNGYAFSTWIFVESFVDTLHTAINAANIPEDAELKSRIDDDRTAKMPRLFSFIS
                     SDYYGIEAYFHGHFLVVETGSGKMRKGLVYFTYAFKSQSWYFIGLEHTSNGELSLYID
                     GVLHETRPFDLPRITKPLSFFCIGTNPPPKMESLHQNSRRCPLFAEMGPIYVFKEPIG
                     PEMMRRLASRGADSLPSFGNAAGLMWLSTNAHVANIEEESAHLDADISRYLYVIYHPS
                     LLNGRHCPDASPSGPSGLLQRPAEVLGHVPVTTRMRPADALWALAYGGPMSLLPFVVS
                     KINNDTLEPEKGNLKSCLASTTLAAPIFRIISVAIQHLGNSNELCRIRGPEILSKILT
                     YLLKTLSFLDATKHKVADEEIVAAVVSLCQSQKNNATLKRHLFSTLLLDLKIWSLCSY
                     GIQKKLLSSLADMVFVESSVMHDVKAVQTLLDGCRRCYNTFHEKDSMNKISINGGPRH
                     IGEVNALVDELLVVIELLLLAAPPPMAVEHIRCLLGFLVDCPQPNQVARALHLIYRLV
                     VQPNKSRATTFAEAFISCGGIETLLVLLQREAKAGDHDVPDNDNDIYSVSGSKAESCI
                     GFPENYNTDDTGSLYGSEFSYNRNSVLGGMASSVGSQMSASESLFIKNLGGISFSISA
                     ENARNNLYNIDKSDGIVVAIIGLFGALISSGHLKFGSHASQDLAGNLNGSLEGAGAML
                     DDKVSLLHFALQKTLQAAPNRLMTGSVYTALLSASLNEAARDEELNFYNPQHRFQHLE
                     LLLILLRSLPYSTKNFQIRALQDLLILACSHSENRNSLTMMEEWPEWLLEILISTHEM
                     GVTSSSASSSINEVEDLIHNFLIIMLEHSMREKDGWKDIEATLHCAEWLSTVGGSSTG
                     EQRARRKKCMPVFKRRLLGDMLDFIARELRVQIQVIAAASPGVALYGLPPDVSKSEKD
                     NAAQYSVALMENAVVILMLVEDHLRLQSKLFCSAHFDTGSTSPFSAVQAAVSSPSANS
                     KPKKGEESSTGAALPFEDFASMVDSRGNRASTIEERLAAAAGAEPYDNVSCAFVSYGS
                     CMIDLAEGWKYRSRLWYGVGQPSKTVDFGGGGSGWDSWKSCLEKDSNGNWVEVVLVRK
                     CVNLLQALLLDEPRLVDGLGMSGDSGTGTGRMTTLYKLLDNDQPFLCMLRIILLSLRE
                     NQGNGENGIIMKNVGDRLSESLKREDESAPSSLESSPRTFMKQIGSALLWSVLSPILQ
                     VPVSESKRQRVLVASCILYSEVWHAVSRDRLPLRKQYLEAIVPPLVAVIRRWRPLLAK
                     IYELLPPDGPNNPLAVDDPALDADATPIESALSMITPGWAAAFASPPASWALNTMAAG
                     TCCSENTFPTPAPINVHQKLKSFTLYERNSAKLQTHTSFQEPLEAYGTLSNEKFGKSH
                     TFSDSRGMSSVAMATSGQRRGKSDMERIMRCNVSEAMGTAWMECLQSVDTKSVYGKDF
                     NALSYKFVALLDGSFSFATNMQRSEVDRLARVDIVARRRLSTGIRAWRKLIHYLIETD
                     SLFGPLSTNLCDPKRVFWKLDYMESSSRMHRFLRRDFKGTDHFNVSAICKDPIELEHD
                     NQKATLALEALSKQLETENNEQDTVVNMEIYTDEMWLYEDIHTKPSETAKQNLQVPTD
                     SSESQLVNFQDLTQSPSAAGPSGLYEIVIIELPASMVRPLKVRHGTFQITTRRINFLV
                     DKSEKKVEGNVDDKDRSWLIASLHQVHNRRYLLRRSALELFMLDRSNFFFDFGNAEAR
                     MNAYRAIIHSRPPHLSNIYLATQRPEQLLKRTQLMERWSRWEISNFEYLMQLNTLAGR
                     SYNDITQYPVFPWVLSDYKSTHLDLANPSSYRDLSKPVGSLNEDRLKKFQEKFRSCNN
                     PIIPKYHYDSHYSTAGTVLYYLMRVEPFTTLSIRLQGGKFEHADRMFSDIGATWDRVL
                     ENTSDVKELVPEMFYLPEILTNENSVDFGTTPHGDKLDSVRLPPWANNPVDFMHKHQM
                     ALESEHVSAHLHEWIDLIFGYKQQGKEAISANNVFFYVTYDGAVDIDKIQDPVQRCAV
                     QDQVAYFGQTPSRLLAIPHIKKMPLRDVLHMQTIFRNPKEVKQYHVPSPKRCNLPASA
                     IHATSDAVVIVDTNAPSANIALHKWHPNTPDGHGTPFMFQPGKNRIKSGSGGGFMRYF
                     KGKSGSGSEEWRYPQAHAYTALAIRNSSIVSITYNNEVITGGHVDNSIRLVLPDGAKT
                     LEIARGHCAPVTCLSLSLDSKYLVSGSRDTTVLVWRIHQSPRFMSGNTSEPPTGTVTP
                     TSVSATTAASCFIDKTKRRRIEGPVQVIRGHLGEIVDCCVDSDLGAVASCSYISDVLV
                     HSVNKGRLLRRFHGVKADIVRLTKNGVVLTWNDSMHALSSYTLNGILISQVHLPFSCN
                     ISCMEISFDGRSFLVGLNSYLRKNYGEDGVGEIKRLDVQSPSVCLLDLHTLKIFHTMR
                     LEEGQDITAMTTNKDDTNLLVSTSDKQLIVYTDPTVSSRN"
     misc_feature    1696..>2607
                     /gene="LOC139839564"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     Region: DUF4704; pfam15787"
                     /db_xref="CDD:464870"
     misc_feature    5911..6183
                     /gene="LOC139839564"
                     /note="PH domain associated with Beige/BEACH; Region:
                     PH_BEACH; pfam14844"
                     /db_xref="CDD:434260"
     misc_feature    6265..7095
                     /gene="LOC139839564"
                     /note="Beige/BEACH domain; Region: Beach; pfam02138"
                     /db_xref="CDD:460459"
     misc_feature    7318..7422
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    7450..7569
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <7453..7659
                     /gene="LOC139839564"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    7564..8340
                     /gene="LOC139839564"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    7582..7812
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    7831..7929
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    7930..8031
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    8080..8238
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    8266..8334
                     /gene="LOC139839564"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 gatgatgaaa aagaagtgat tggcggtgaa ccagtcgaaa catccgatgc aggacgtgtt
       61 aacacaatta accttaacaa tgtgaatatc gggactaacg atgtagatgc tatgttcgag
      121 caggcatgtt tagataggga catagagttg gataacttac taaagcgaga taataaagat
      181 gatgactcat atggacttca tgctcacaat aatcttcacg ctaatcacaa taataatcat
      241 atcttagaag atataaaaac agaaattttg catctagtgg attctgcaat tatgggtcag
      301 ctcgaaagta tagaaactat gaagagtatg gtgagtggta aagtggattt taaagatgga
      361 gtcgatgcag atagtgttgc agatttgtta gttgatacac ttcttacaac aatgggagga
      421 gttgaatctt ttgaagatga tgatgatgaa tctaataatt tgcctactgt tatgaaaaac
      481 tcaaacgctg ctataatatc agttgaactt cttccatggc ttccatggtt aaccgatagt
      541 gttgggttca tgtctcctag gacacgattg gttcgtgggt tacgaaccat actacgatca
      601 tgtacaagaa acagagccat gtgctgttca gctggtttaa ttagggttct tttgcaaaca
      661 gctgagaaga tatttgttga caatgtcggt tcaacaaagc aaatgaaatg gaacggggct
      721 ccattatgtt catgtcttca gtatttagcg ggacactcgg ttagtgtaac tgatctgcat
      781 acgtggtttc ggttggtaaa aataatgatt aaaacttcat gggctcctcg gttaatgact
      841 tctttagaaa aggcgttgag tgggaaagat tcacggggcc cacaatcttc gtttgagttt
      901 gacggtcaaa gttcaggctt gctgggaccc ggagagggcc gttggccatt tcttaacggc
      961 tatgcgtttt ccacttggat ttttgttgag tcatttgtcg acactttaca tacagcgatt
     1021 aatgctgcaa acatacccga agatgctgaa ttgaaatcac gtatagatga tgatcgaaca
     1081 gcgaaaatgc ctcggctttt tagctttata tcatcagatt attacggtat cgaggcatat
     1141 tttcatggtc actttttggt ggttgaaacc gggagtggaa aaatgagaaa aggtttggtt
     1201 tattttacgt acgctttcaa gtcacaatcg tggtatttta ttggacttga acacacttca
     1261 aatggcgaat taagtttata tatcgatggt gtgttacatg aaacccgtcc ttttgacctc
     1321 cctcgaatca ccaaaccact ttcgtttttc tgcattggaa ctaatccacc accaaaaatg
     1381 gaaagtttgc atcaaaattc acgaagatgc ccattgttcg ccgaaatggg cccgatttat
     1441 gtatttaaag aaccaattgg gcctgagatg atgaggaggt tggcttccag aggtgctgat
     1501 tcacttcctt catttggtaa tgcagccggg ttgatgtggt tatcgactaa cgcccatgtg
     1561 gcaaatatcg aagaggaaag cgcgcatttg gatgcagata tttcacgata cctttacgtt
     1621 atatatcatc ctagtttact aaacggacgt cattgtccag atgcttcccc ttctggccct
     1681 tcaggactgc tacagagacc tgcagaggtt ctgggtcatg tacctgtaac cacaagaatg
     1741 cggcccgcag atgctttgtg ggccctagcg tacggaggcc caatgtcttt acttccattt
     1801 gtagtaagta aaattaataa tgatacacta gaaccagaaa aaggcaatct taaatcatgc
     1861 ttagcttcaa caactcttgc tgctccaata tttaggatca tatcagtagc aattcaacac
     1921 ctcggaaaca gcaatgaatt atgccgtata cgtggtcccg agattttatc aaaaattcta
     1981 acatatcttt taaaaactct atcgtttctt gatgctacca aacataaagt cgctgatgaa
     2041 gaaattgttg cagcagttgt aagtttatgc caatctcaga aaaacaacgc tacgttaaaa
     2101 agacatcttt ttagtacact gttgctcgat ttgaaaattt ggagtttatg tagctacggc
     2161 atacagaaga agcttttatc atctttagcg gatatggttt tcgtcgagtc atctgtaatg
     2221 catgatgtga aagcggtaca gacacttctt gatggatgta ggagatgcta caacactttt
     2281 catgaaaaag attcgatgaa taaaatttcg attaacggtg gaccccggca cattggtgaa
     2341 gtgaatgctt tggttgatga gcttttagtg gttattgaac ttcttttgtt ggcagctcct
     2401 cctccaatgg ctgtcgaaca tattagatgt ttgcttggat tcttggttga ttgtccacaa
     2461 ccaaatcagg ttgcaagggc actgcacttg atatacaggc tggtggtaca gccaaataag
     2521 tctagagcca cgacttttgc ggaggcgttc atatcatgtg gtggtattga aacacttcta
     2581 gtcttattgc aacgggaagc aaaagccgga gatcatgatg taccagacaa cgataatgat
     2641 atctattcag tctcgggatc taaagccgaa agttgtattg gatttccgga aaattacaac
     2701 accgatgata ctggatcttt atacggaagt gaattttcat ataatcgaaa tagtgtcctt
     2761 ggtggaatgg cctccagtgt aggaagccaa atgtcagctt ctgagagtct atttataaaa
     2821 aatttggggg gcataagttt ctcaatcagt gctgaaaatg caagaaataa tttgtataat
     2881 attgataaaa gtgatggaat tgttgtggcg ataattggac tttttggggc tttaatttct
     2941 tcgggccatt taaagttcgg ttctcatgct tcacaagatc ttgcaggaaa tcttaatggt
     3001 tcgcttgaag gtgcgggtgc tatgttggac gataaagtgt cacttctaca ttttgctctg
     3061 caaaagactc tgcaagccgc accaaatagg cttatgaccg ggagcgtcta cacagctttg
     3121 ttaagtgcct cgttgaatga agcagcaagg gatgaggaac tgaactttta taatccgcaa
     3181 catcgctttc agcatttaga actcttgttg attcttttgc gttcactccc atattcaaca
     3241 aagaattttc aaattcgagc attacaggat cttttgattt tggcttgcag tcattcagaa
     3301 aacagaaaca gtctcaccat gatggaggaa tggcctgaat ggctcttgga aattcttata
     3361 tctactcatg agatgggtgt aacaagttct tcggcttctt caagcattaa tgaagttgaa
     3421 gaccttatac acaatttcct cattatcatg ttagagcact caatgcgtga aaaggatgga
     3481 tggaaggata ttgaagctac acttcattgt gcagaatggc tttcaaccgt agggggatct
     3541 agcacagggg agcaacgagc cagacgcaag aaatgtatgc ccgtctttaa gagaaggctt
     3601 ttaggtgata tgttggactt catcgctaga gagctacgag ttcagatcca agttattgct
     3661 gcagcctctc ctggtgtggc tttgtatgga ttaccacctg acgtctctaa gtcagaaaaa
     3721 gataatgctg cccagtattc tgtggcttta atggagaatg cagttgttat attaatgctt
     3781 gttgaagatc atttacgcct gcagagcaaa ctattttgct ctgcccattt tgacactggt
     3841 tcaacttctc cgttttctgc tgttcaagct gcagtttcga gtccctctgc aaactcaaag
     3901 cctaagaagg gagaggaatc gtctacgggc gctgcacttc cttttgaaga ttttgcttca
     3961 atggttgaca gtagaggtaa tcgtgcatcg acaatagaag aacgtcttgc agctgcagca
     4021 ggagctgaac cttatgacaa cgtttcttgt gcttttgtgt catacggaag ttgtatgata
     4081 gatttagccg agggttggaa atacagaagc cgattgtggt acggtgtcgg tcaaccttca
     4141 aaaacagttg actttggtgg cggtggcagt ggctgggact catggaaatc atgtttagaa
     4201 aaggattcaa atggtaattg ggtcgaagtt gtattagtaa ggaaatgtgt aaacttgcta
     4261 caagctttat tattagatga acctaggctc gtcgatgggc ttggtatgag tggcgattcg
     4321 ggtacaggga cgggtcgtat gacaactctt tataagttgt tggataacga ccagccattt
     4381 ttatgcatgc ttcgtataat actactttcg ttaagggaaa atcagggtaa cggtgaaaat
     4441 ggaataatta tgaagaatgt tggtgatagg ttgtctgaaa gtttaaaaag agaagacgaa
     4501 agtgctccgt catcgttaga aagtagtcct cgaacattca tgaagcagat tggttcagca
     4561 ctattatgga gtgtactttc gcccatcttg caagttcccg tttctgagtc caagagacag
     4621 agagtgttgg ttgcatcctg tattctatat tctgaggtgt ggcatgcggt tagccgagac
     4681 agactccctc taaggaaaca gtatctcgaa gctattgtgc ctccactagt ggctgtcatt
     4741 cgaagatggc gccctctttt ggccaaaatt tatgaacttc ttcccccaga tggtccaaat
     4801 aatcctcttg ctgtagatga cccagcacta gatgctgatg caactcctat agagagtgca
     4861 ctatctatga tcactcccgg ttgggcggct gcttttgcat ctccacctgc ttcatgggca
     4921 ttaaacacga tggctgccgg aacttgttgc agtgaaaaca catttcctac acctgctcca
     4981 ataaacgttc atcaaaagct caaatctttc accttatacg aaagaaattc agctaaactt
     5041 caaacacaca caagctttca agaaccctta gaagcttacg gaacattatc taatgaaaaa
     5101 tttggtaaat ctcatacctt ttctgattct cgagggatga gttcagtggc tatggctaca
     5161 tctggacaaa ggcgaggtaa aagtgatatg gaacgtataa tgagatgtaa tgtttcggaa
     5221 gcaatgggaa ctgcgtggat ggaatgtttg caatcggttg atacaaaatc ggtttacgga
     5281 aaagatttta atgcattatc ttataaattt gttgctcttc ttgatggaag tttttctttt
     5341 gccacaaaca tgcaacgatc tgaggttgat agacttgctc gagttgatat tgttgctcga
     5401 cgtcgtctaa gtaccggtat acgtgcctgg cgcaaactca tccattacct aattgagact
     5461 gacagtcttt ttggaccatt gagtacaaat ctttgtgatc ctaaaagagt tttctggaaa
     5521 ttggactata tggaaagttc ttcaaggatg catagatttt taaggaggga ttttaaggga
     5581 actgatcatt tcaatgtttc tgcaatctgc aaagatccta tagaacttga acatgataac
     5641 caaaaggcga cgttggctct agaagctctc tcaaaacaac tagaaactga aaataatgaa
     5701 caagatacag ttgttaacat ggaaatttac actgatgaga tgtggttgta cgaagatatt
     5761 catacgaaac cgtcagaaac tgccaaacag aatctgcagg tgccaacgga ttctagtgaa
     5821 tcacaacttg taaatttcca agatcttaca caaagtcctt cagcagcggg tcccagtgga
     5881 ctttatgaaa tagttataat tgagcttcca gcatcgatgg ttcgaccact aaaagttcga
     5941 catggaacat ttcagattac tactaggaga attaactttc ttgttgataa atctgagaag
     6001 aaagtcgaag gtaatgtaga cgataaagat cgaagctggt tgatagcttc tcttcatcaa
     6061 gtacacaaca gaaggtatct cttacgaaga agtgctctgg aattatttat gcttgaccga
     6121 tcgaattttt tcttcgattt tgggaatgct gaggcaagaa tgaatgccta cagagctatt
     6181 attcactcac gtcctccaca tttgagcaat atttatttgg cgactcagag acctgaacaa
     6241 cttctcaaac ggactcaact catggaacgt tggtcacgtt gggagatcag caactttgaa
     6301 tatttaatgc agcttaacac gttggctggg cgtagttata acgacatcac ccagtatcca
     6361 gttttcccat gggttctttc agattacaaa tcaactcatt tggatcttgc caatccatca
     6421 tcttatcggg atctttcaaa gcctgttgga tctttaaatg aggatcggtt gaaaaagttc
     6481 caggaaaaat tcagaagctg taacaatccc atcataccca agtaccatta cgattcacat
     6541 tactcaactg ccgggacagt gttgtattat ctaatgcgag ttgaaccgtt tactaccctt
     6601 tcaattcgac tacaaggcgg caagtttgaa catgcagaca gaatgttttc agatattggt
     6661 gctacttggg atagagtttt ggagaacacg agcgacgtga aggaactggt ccctgaaatg
     6721 ttttaccttc cggagatttt aacaaatgag aattcagttg attttggtac cacgccacat
     6781 ggagataaat tagattctgt taggcttcct ccttgggcta ataaccctgt tgatttcatg
     6841 cataaacatc aaatggctct cgagagtgaa catgtctccg cacatttgca tgagtggatt
     6901 gatctgatat ttgggtacaa gcaacaaggg aaagaagcta tttcagcaaa caatgtattc
     6961 ttttacgtca cgtatgatgg ggctgttgat atagacaaaa ttcaggatcc agtccagcga
     7021 tgtgctgtac aagatcaagt tgcttacttt ggtcaaaccc cgtcacgtct tttagcaatc
     7081 ccacatataa agaagatgcc acttcgggat gttctccata tgcagaccat atttcggaac
     7141 cccaaagaag tcaaacaata tcatgttcca tctcctaaac gctgcaatct accggcatct
     7201 gccattcatg caacttcaga tgctgttgta attgttgata ctaatgcgcc atcagcaaac
     7261 attgcattac ataaatggca cccaaataca cctgatggac atggaacgcc tttcatgttt
     7321 caaccaggaa aaaatagaat aaagtcaggt agtggtggag gtttcatgcg ttatttcaaa
     7381 ggaaaaagtg ggtccggttc agaggaatgg agatatcctc aggctcatgc ctacacggct
     7441 ttagcgatta ggaactcttc cattgtttcc ataacatata ataacgaagt tatcacaggt
     7501 ggacatgtgg acaacagtat aagattggta ttacctgatg gagcaaaaac attagaaata
     7561 gcacgagggc attgtgcacc cgtgacttgt ttatctttgt cactggatag caagtacctc
     7621 gtgagtgggt cccgagacac aacagttttg gtttggagaa tacaccagtc accaaggttc
     7681 atgtcaggca acacgtctga accacccact ggcacagtca caccaacttc agttagtgca
     7741 acaacagctg caagttgttt cattgataaa actaaaagaa ggcgtattga gggtcccgta
     7801 caggttatac gtggccatct tggtgaaatt gtcgattgtt gtgtggattc agatcttggt
     7861 gctgttgctt cgtgttctta tatttcagac gttttggttc attcggtgaa taaaggtcga
     7921 ttgctcagaa ggtttcatgg tgtaaaggct gatatagtta ggcttacaaa aaacggggtt
     7981 gtgctgacgt ggaatgattc aatgcatgct ctctcgagtt atactcttaa cgggatctta
     8041 atttcccagg tgcatcttcc tttttcttgt aacattagtt gcatggagat ttctttcgat
     8101 gggcggagtt ttttggttgg attaaactca tatttgcgaa aaaattatgg agaagatgga
     8161 gttggtgaaa ttaagagatt ggatgttcaa tctccttccg tttgtctcct tgatctacat
     8221 actcttaaga tatttcacac aatgagactt gaagaaggac aagatataac ggcaatgacc
     8281 acgaacaagg acgacactaa tctcttggtc tcaacttctg acaaacaact catagtctac
     8341 acagatccta ctgtaagttc acgaaattag tgtaaggata cactaatttc cttttttagt
     8401 aaacataaag acggtgttct gacaaagttc acgaagatgc gtaaatatct ttaaagtgaa
     8461 gttcacgacg gtggtcagaa gagaaaggaa gcggaattat agggttgcca tggggaaaac
     8521 gtcgatcaag gaggagcttt gcaagtgttt caagtgacga tgaatagcat ttttcgaata
     8581 gcgataaatt ttcttaccca cttcgcccaa gttagaggta aatggtattt tgccagttta
     8641 aacatgatca aaactttggt attataatgt tgaccattga cctctatatg ttgttcttgt
     8701 tccgtatatg attttggatt atatatggtg tggatcatat gctaatttat gctaattgca
     8761 agagttgacc aaaagagaga gttggcttgt ttcttgagtt aagatacttg gattttgaac
     8821 ttcagactgg tgtcatcgcg tgatatattt ccctcggccc agtacatatc aatcaattgc
     8881 aatgtattag atgaacacta gagagctgtt atgcaaaaca ttcaattttg actttgacca
     8941 tgtaaatttg aagccaccat gaagtggccc ttaggcttgt acattttagc gctgatttat
     9001 tatggtgtaa tactacatgt tgtactgtta tgtgttagaa atgaacaagg ttagtgtcgt
     9061 tggtattcaa gacgaatttg agttccaagt tgtttcatat tgttgatcct atcaaataca
     9121 aatatagaag atctg
//
LOCUS       XM_071829659            3666 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839565), transcript variant X1, mRNA.
ACCESSION   XM_071829659
VERSION     XM_071829659.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3666
                     /gene="LOC139839565"
                     /note="uncharacterized LOC139839565; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839565"
     CDS             573..3197
                     /gene="LOC139839565"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685760.1"
                     /db_xref="GeneID:139839565"
                     /translation="MADIAIDNNNLQEIPLSSNPNPTSQENRPPAILNPSPKTSGNNK
                     DPITPVTGADSLPKSPSPQDFILSVASNIASQPLQYSDPDVWGVLTAISPKARQRRQG
                     INMLLTSDEHLIGRTVADMRFQILSNQISQNHCKIYRKKVATEDAEGQSRVFYCGFLK
                     DTSTNGSYLNWEKLNKNSPESKLHHGDIISFAAPPQHEAAYAFVFREVLKPISEADSQ
                     PLKRKADTFGSETKRQRGIGIGSSEGPISLDDFRSLQRSNTELRKQLEDQVATIDQLR
                     NEHRTTLELHEVEKKNLKESITNTYIDELKEMHDMCEAKQKELVELNKSSSEQKHAMV
                     DLNERLNASMQSCTEANEIMRSQNASIAELKALLDEEREQRKDDREKAVATLTDAIQR
                     VKAEGQEELKRLSDASLRREHEQQEIINKLQESEKERCLLVETLRSKLEDTRQKLVGS
                     ENKVRQLEAQLSQQQQVSSIAKQKVEELEHETSRLKKELESEKQAAREEAWAKVSDLE
                     LQINAAMRDLEYEKRRLKAARERIMLRETQLRAFYSTTEDISSLFAKQQEQLKSMQKT
                     LEDEENYENLSLDVHPNVDNQNQNPIDLLRQSKEVIGSQCSGGMKAVDQAQTSSDEVS
                     ATENHDCDARNQETCEDTQEAEFTSVDPCAKGPFGSDIDGGNTAAIETEQVLDTETQG
                     LDQHIDLNKLNAGDTMAIDDEEERVEPDGNNLHQSKEAIEEDTEGGDTIRTADLLTSE
                     VAGSWACSTTPSCHGENESPGSGGGGVVVVLHDSASVAAESQTGVVRNSEHEALTKMI
                     GIVAPEMQEQFGGVIESDSEKGVESNSDTEDCAEEGSGESDGVPSYNDNKASEAMDED
                     DDDDEASSQDSLETASNK"
     misc_feature    828..1187
                     /gene="LOC139839565"
                     /note="forkhead associated (FHA) domain superfamily;
                     Region: FHA; cl00062"
                     /db_xref="CDD:469597"
     misc_feature    order(915..920,963..968,972..974,1065..1070)
                     /gene="LOC139839565"
                     /note="phosphopeptide binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438682"
     misc_feature    1350..>2339
                     /gene="LOC139839565"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      
        1 gtcagaatca ttgcaaaatc tataggaaga aggttgctac tgaagatgca gagggtcaat
       61 ccagagtctt ttattgcggc ttcttgaaag atactaggta ggttttcttc gtatatagtg
      121 gatcatatct gctgaactgt ggactcattt tttttttaag ggtatttaaa tctctacagc
      181 acaaatgggt catatctgaa ttgggaaaag ttaaataaga acagtcctga gtccaaacta
      241 catcatggag atatcatatc ttttgcagca cctcctcaac atgatacgtt tggctctgaa
      301 accaagagac aaagaggaat tggtgtcggt tcttccgaag gtcccatttc tcttgatgat
      361 tttcgtagcc ttcaacggtc aaatacggta catttttttc aacttggatt cacctgcaat
      421 ttttattgat gaagtagctc gttagtcttt actccaacac acttcagtta tggcgctaaa
      481 attctagtta gttagggttc atattcgaag atcccccgcc atttccaaga aaaatttctt
      541 cacattcaag caatcaatca tttaatcaat ccatggctga cattgcaatt gataacaaca
      601 accttcaaga aattcctctc tcttcaaacc ctaaccctac ctctcaagaa aatagaccac
      661 cagcgatttt aaaccctagc cctaaaacta gcggcaacaa taaggatcct ataactccgg
      721 tcaccggcgc cgattcgtta cctaaatctc caagtcctca agatttcata ctgtcagtcg
      781 cttcaaacat tgcatctcaa ccgttacagt actccgatcc tgatgtctgg ggtgtactca
      841 ccgccatttc tccgaaagcg cgccaacgac gtcagggaat aaacatgctt ttgactagtg
      901 atgagcatct cattggccga actgtagccg atatgcggtt tcagattttg tcaaatcaaa
      961 tcagtcagaa tcattgcaaa atctatagga agaaggttgc tacggaagat gcagagggtc
     1021 aatccagagt cttttattgt ggcttcttga aagatactag cacaaatggg tcatatctga
     1081 attgggaaaa gttaaataag aacagtcctg agtccaaact acatcatgga gatattatat
     1141 cttttgcagc acctcctcaa catgaagcag cttatgcgtt tgtgttccga gaagttctta
     1201 aacctatatc agaggcagat agccagcctc tgaaaagaaa agcagatacg tttggctctg
     1261 aaaccaagag acaaagagga attggtatcg gttcttccga aggtcccatt tctcttgatg
     1321 attttcgtag ccttcaacgg tcaaatacgg aattaaggaa gcagttggaa gatcaagttg
     1381 caaccattga tcaattacgt aatgaacatc gtacaacact cgagcttcat gaagttgaaa
     1441 agaagaattt gaaggagtcc attacaaaca cctacattga cgaactcaaa gagatgcacg
     1501 atatgtgtga agcaaaacaa aaggaattag tcgaattgaa taagtcaagt tcagaacaaa
     1561 aacatgctat ggttgacctt aatgaaagac tcaatgcatc tatgcagagc tgtaccgaag
     1621 caaacgaaat aatgcgtagc caaaatgcat ccatagctga actcaaggct cttctagacg
     1681 aagaaagaga acaaagaaaa gacgatcgag aaaaggcagt tgcaacattg acagacgcaa
     1741 tacagagggt caaagctgaa ggtcaggagg aattgaagcg gctctcggat gcttctctta
     1801 gacgagaaca cgagcagcag gaaattatca ataagcttca ggaatcagaa aaagaaaggt
     1861 gtttattggt ggaaaccttg cgatccaaat tggaagacac taggcagaaa ttggttgggt
     1921 ctgagaataa ggtccggcaa cttgaagcgc agctttctca acagcagcag gtttcttcca
     1981 ttgctaaaca gaaggtggaa gaacttgagc atgaaactag caggttaaag aaggaacttg
     2041 aaagcgaaaa gcaggcagct agggaagagg cctgggctaa ggtttctgat cttgaacttc
     2101 agatcaatgc tgcaatgcgg gatcttgaat atgaaaagcg taggctaaaa gctgcccgag
     2161 aaaggataat gcttcgggaa acccagcttc gagcattcta ttcaacgaca gaggacatct
     2221 ctagcttatt tgcaaagcaa caagaacagt taaagtctat gcagaaaaca ctagaagatg
     2281 aggagaatta tgagaacttg tcacttgatg ttcatcctaa cgttgataac caaaaccaaa
     2341 acccgataga tttgctccgt caaagtaaag aagtaatcgg gtctcagtgc agtggcggca
     2401 tgaaagctgt agatcaagct cagacatcga gtgacgaagt tagtgcaact gagaatcatg
     2461 attgtgatgc tcgaaatcaa gaaacttgtg aagatactca agaagcagag tttactagtg
     2521 ttgacccgtg tgctaaaggt ccgtttggat ccgatattga cggagggaat accgcagcaa
     2581 ttgaaaccga acaagttttg gacactgaaa cccagggact tgaccaacat attgacttga
     2641 acaagctaaa tgctggggat acaatggcga tagacgatga ggaagaaaga gttgaacccg
     2701 atggtaataa tttacaccaa tcaaaggagg ctatcgaaga agatacagaa ggtggagaca
     2761 ccattagaac tgccgacctg ttaacttctg aagttgctgg gagctgggct tgcagtacta
     2821 ctccttcgtg ccacggcgag aatgagtctc cgggaagtgg cggtggcggt gttgttgtgg
     2881 ttttgcatga ttctgctagt gtagcagctg aaagccaaac tggtgttgta aggaactctg
     2941 agcatgaagc acttactaaa atgataggga ttgtagcccc agagatgcaa gaacaatttg
     3001 gtggtgttat agaaagtgac agtgaaaaag gcgttgaatc taactcggat acagaagatt
     3061 gtgccgagga gggtagtggt gaatctgatg gggtaccctc gtataatgac aataaagcga
     3121 gtgaagcaat ggacgaggat gatgatgacg atgaagcaag ctcacaagat tctctagaaa
     3181 ctgcatcaaa taaataaaga catgatgaat caacagaatg aagctacaag agacaagaac
     3241 tataggaagc ttatgaagtc acaagagacg tttgttcgtg tactctgtta caattgagat
     3301 gtcgacttta tacccttgta ttgtgattaa tcagtattat atgtaatctg tttgctcgta
     3361 aatactacag tagtaaattt tagggaaatt tagtttctag gaatattaga tgggctcttg
     3421 ttgcttgtgt acaaaaagaa aatttccctt gaatgatgtc acatacacat tgaaatgatt
     3481 ctgaacttta taaacggcaa attgggtatt caatcatcac ctgtattatt gtacttggtt
     3541 tatggacaaa ctgtgccaca gcaagggtta agaactggcc gtaaacacat ttaactttgg
     3601 atcgaaatga tagccaggta catccggttc aacggctgaa gcaagagcgt tatcaatggg
     3661 aaagga
//
LOCUS       XM_071829660            3663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839565), transcript variant X2, mRNA.
ACCESSION   XM_071829660
VERSION     XM_071829660.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3663
                     /gene="LOC139839565"
                     /note="uncharacterized LOC139839565; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839565"
     CDS             573..3194
                     /gene="LOC139839565"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685761.1"
                     /db_xref="GeneID:139839565"
                     /translation="MADIAIDNNNLQEIPLSSNPNPTSQENRPPAILNPSPKTSGNNK
                     DPITPVTGADSLPKSPSPQDFILSVASNIASQPLQYSDPDVWGVLTAISPKARQRRQG
                     INMLLTSDEHLIGRTVADMRFQILSNQISQNHCKIYRKKVATEDAEGQSRVFYCGFLK
                     DTSTNGSYLNWEKLNKNSPESKLHHGDIISFAAPPQHEAAYAFVFREVLKPISEADSQ
                     PLKRKADTFGSETKRQRGIGIGSSEGPISLDDFRSLQRSNTELRKQLEDQVATIDQLR
                     NEHRTTLELHEVEKKNLKESITNTYIDELKEMHDMCEAKQKELVELNKSSSEQKHAMV
                     DLNERLNASMQSCTEANEIMRSQNASIAELKALLDEEREQRKDDREKAVATLTDAIQR
                     VKAEGQEELKRLSDASLRREHEQQEIINKLQESEKERCLLVETLRSKLEDTRQKLVGS
                     ENKVRQLEAQLSQQQQVSSIAKQKVEELEHETSRLKKELESEKAAREEAWAKVSDLEL
                     QINAAMRDLEYEKRRLKAARERIMLRETQLRAFYSTTEDISSLFAKQQEQLKSMQKTL
                     EDEENYENLSLDVHPNVDNQNQNPIDLLRQSKEVIGSQCSGGMKAVDQAQTSSDEVSA
                     TENHDCDARNQETCEDTQEAEFTSVDPCAKGPFGSDIDGGNTAAIETEQVLDTETQGL
                     DQHIDLNKLNAGDTMAIDDEEERVEPDGNNLHQSKEAIEEDTEGGDTIRTADLLTSEV
                     AGSWACSTTPSCHGENESPGSGGGGVVVVLHDSASVAAESQTGVVRNSEHEALTKMIG
                     IVAPEMQEQFGGVIESDSEKGVESNSDTEDCAEEGSGESDGVPSYNDNKASEAMDEDD
                     DDDEASSQDSLETASNK"
     misc_feature    828..1187
                     /gene="LOC139839565"
                     /note="forkhead associated (FHA) domain superfamily;
                     Region: FHA; cl00062"
                     /db_xref="CDD:469597"
     misc_feature    order(915..920,963..968,972..974,1065..1070)
                     /gene="LOC139839565"
                     /note="phosphopeptide binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438682"
     misc_feature    1350..>2336
                     /gene="LOC139839565"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      
        1 gtcagaatca ttgcaaaatc tataggaaga aggttgctac tgaagatgca gagggtcaat
       61 ccagagtctt ttattgcggc ttcttgaaag atactaggta ggttttcttc gtatatagtg
      121 gatcatatct gctgaactgt ggactcattt tttttttaag ggtatttaaa tctctacagc
      181 acaaatgggt catatctgaa ttgggaaaag ttaaataaga acagtcctga gtccaaacta
      241 catcatggag atatcatatc ttttgcagca cctcctcaac atgatacgtt tggctctgaa
      301 accaagagac aaagaggaat tggtgtcggt tcttccgaag gtcccatttc tcttgatgat
      361 tttcgtagcc ttcaacggtc aaatacggta catttttttc aacttggatt cacctgcaat
      421 ttttattgat gaagtagctc gttagtcttt actccaacac acttcagtta tggcgctaaa
      481 attctagtta gttagggttc atattcgaag atcccccgcc atttccaaga aaaatttctt
      541 cacattcaag caatcaatca tttaatcaat ccatggctga cattgcaatt gataacaaca
      601 accttcaaga aattcctctc tcttcaaacc ctaaccctac ctctcaagaa aatagaccac
      661 cagcgatttt aaaccctagc cctaaaacta gcggcaacaa taaggatcct ataactccgg
      721 tcaccggcgc cgattcgtta cctaaatctc caagtcctca agatttcata ctgtcagtcg
      781 cttcaaacat tgcatctcaa ccgttacagt actccgatcc tgatgtctgg ggtgtactca
      841 ccgccatttc tccgaaagcg cgccaacgac gtcagggaat aaacatgctt ttgactagtg
      901 atgagcatct cattggccga actgtagccg atatgcggtt tcagattttg tcaaatcaaa
      961 tcagtcagaa tcattgcaaa atctatagga agaaggttgc tacggaagat gcagagggtc
     1021 aatccagagt cttttattgt ggcttcttga aagatactag cacaaatggg tcatatctga
     1081 attgggaaaa gttaaataag aacagtcctg agtccaaact acatcatgga gatattatat
     1141 cttttgcagc acctcctcaa catgaagcag cttatgcgtt tgtgttccga gaagttctta
     1201 aacctatatc agaggcagat agccagcctc tgaaaagaaa agcagatacg tttggctctg
     1261 aaaccaagag acaaagagga attggtatcg gttcttccga aggtcccatt tctcttgatg
     1321 attttcgtag ccttcaacgg tcaaatacgg aattaaggaa gcagttggaa gatcaagttg
     1381 caaccattga tcaattacgt aatgaacatc gtacaacact cgagcttcat gaagttgaaa
     1441 agaagaattt gaaggagtcc attacaaaca cctacattga cgaactcaaa gagatgcacg
     1501 atatgtgtga agcaaaacaa aaggaattag tcgaattgaa taagtcaagt tcagaacaaa
     1561 aacatgctat ggttgacctt aatgaaagac tcaatgcatc tatgcagagc tgtaccgaag
     1621 caaacgaaat aatgcgtagc caaaatgcat ccatagctga actcaaggct cttctagacg
     1681 aagaaagaga acaaagaaaa gacgatcgag aaaaggcagt tgcaacattg acagacgcaa
     1741 tacagagggt caaagctgaa ggtcaggagg aattgaagcg gctctcggat gcttctctta
     1801 gacgagaaca cgagcagcag gaaattatca ataagcttca ggaatcagaa aaagaaaggt
     1861 gtttattggt ggaaaccttg cgatccaaat tggaagacac taggcagaaa ttggttgggt
     1921 ctgagaataa ggtccggcaa cttgaagcgc agctttctca acagcagcag gtttcttcca
     1981 ttgctaaaca gaaggtggaa gaacttgagc atgaaactag caggttaaag aaggaacttg
     2041 aaagcgaaaa ggcagctagg gaagaggcct gggctaaggt ttctgatctt gaacttcaga
     2101 tcaatgctgc aatgcgggat cttgaatatg aaaagcgtag gctaaaagct gcccgagaaa
     2161 ggataatgct tcgggaaacc cagcttcgag cattctattc aacgacagag gacatctcta
     2221 gcttatttgc aaagcaacaa gaacagttaa agtctatgca gaaaacacta gaagatgagg
     2281 agaattatga gaacttgtca cttgatgttc atcctaacgt tgataaccaa aaccaaaacc
     2341 cgatagattt gctccgtcaa agtaaagaag taatcgggtc tcagtgcagt ggcggcatga
     2401 aagctgtaga tcaagctcag acatcgagtg acgaagttag tgcaactgag aatcatgatt
     2461 gtgatgctcg aaatcaagaa acttgtgaag atactcaaga agcagagttt actagtgttg
     2521 acccgtgtgc taaaggtccg tttggatccg atattgacgg agggaatacc gcagcaattg
     2581 aaaccgaaca agttttggac actgaaaccc agggacttga ccaacatatt gacttgaaca
     2641 agctaaatgc tggggataca atggcgatag acgatgagga agaaagagtt gaacccgatg
     2701 gtaataattt acaccaatca aaggaggcta tcgaagaaga tacagaaggt ggagacacca
     2761 ttagaactgc cgacctgtta acttctgaag ttgctgggag ctgggcttgc agtactactc
     2821 cttcgtgcca cggcgagaat gagtctccgg gaagtggcgg tggcggtgtt gttgtggttt
     2881 tgcatgattc tgctagtgta gcagctgaaa gccaaactgg tgttgtaagg aactctgagc
     2941 atgaagcact tactaaaatg atagggattg tagccccaga gatgcaagaa caatttggtg
     3001 gtgttataga aagtgacagt gaaaaaggcg ttgaatctaa ctcggataca gaagattgtg
     3061 ccgaggaggg tagtggtgaa tctgatgggg taccctcgta taatgacaat aaagcgagtg
     3121 aagcaatgga cgaggatgat gatgacgatg aagcaagctc acaagattct ctagaaactg
     3181 catcaaataa ataaagacat gatgaatcaa cagaatgaag ctacaagaga caagaactat
     3241 aggaagctta tgaagtcaca agagacgttt gttcgtgtac tctgttacaa ttgagatgtc
     3301 gactttatac ccttgtattg tgattaatca gtattatatg taatctgttt gctcgtaaat
     3361 actacagtag taaattttag ggaaatttag tttctaggaa tattagatgg gctcttgttg
     3421 cttgtgtaca aaaagaaaat ttcccttgaa tgatgtcaca tacacattga aatgattctg
     3481 aactttataa acggcaaatt gggtattcaa tcatcacctg tattattgta cttggtttat
     3541 ggacaaactg tgccacagca agggttaaga actggccgta aacacattta actttggatc
     3601 gaaatgatag ccaggtacat ccggttcaac ggctgaagca agagcgttat caatgggaaa
     3661 gga
//
LOCUS       XR_011756983            3323 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein-tyrosine-phosphatase
            MKP1-like (LOC139839566), transcript variant X1, misc_RNA.
ACCESSION   XR_011756983
VERSION     XR_011756983.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3323
                     /gene="LOC139839566"
                     /note="protein-tyrosine-phosphatase MKP1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839566"
     misc_RNA        1..3323
                     /gene="LOC139839566"
                     /product="protein-tyrosine-phosphatase MKP1-like,
                     transcript variant X1"
                     /db_xref="GeneID:139839566"
ORIGIN      
        1 cactcatctt tctttgcaac cagagacttc agtcttcccc ctcaattttc cctcacggtc
       61 ccataatctg tgtaatttca tttattaatt ttgtattagc atttaggttt agctacaaag
      121 acactgcgtg ttatactgac tattgataat ttgatataga tataaatata gatcagacag
      181 tgtgtatttt gagtgtggtt agggtttcgt tagtggaatg gtaggaacag atgatgatgt
      241 tcatggagaa agtagtaaaa gtgatagtct cggttcgaaa ttgcataatt cggcttctgc
      301 taataggaaa tatttgcgct cggcttcatg gtcgccatct cacgtgccat taccaccgct
      361 taatccagac agtttgaaag atcaggatgt tttgaataga agacgtcctg gtccgttaat
      421 tcctagatcg aatagtaaag gtaggtcgtg tttgccaccg ttatcaattg ctagacgtag
      481 cttagatgag tggccgagag ctggttcaga tgatgttggt gagtggcctg ttcctagtac
      541 acctagtggg actaatggtg aaagattaaa acttgatttg tcgtcagttc aaagagttcc
      601 ggataagaat gctggtttag tgaaaagaga taagattgcg ttttttgata agaagtgttc
      661 caaggttgct gaacatatct atcttggtgg tgatgctgtt gcaagggata aagatatact
      721 taaacaacat aagattactc atattctcaa ttgtgtagga tttgtctgtc cagaatattt
      781 taaaggaaat tttgtttatc gaactttgtg gttgcaagat agtccttcag aggatattac
      841 gagtatattg tatgatgttt ttgattactt tgaagatgtt agagatcaaa atggaaaagt
      901 ttttgtacat tgttgtcaag gggtgtctcg gtcaacgtct ttggtaattg cgtatcgtat
      961 gtggagagaa gggcaaagct ttgatgatgc ttttcaatac gtaaaggcag ctcgagaaat
     1021 tgctgatcct aatatggggt ttgcatgtca gttgttacag tgtcaaaaaa gggttcacgc
     1081 gtttccatta agtccaagct cgttacttag gttatataga attgcccctc actcgtcata
     1141 tgacccttta catcttgttc caaaaatgtt aaacgtacct tctccagcag gtttagattc
     1201 tagaggtgcg tttatcttgc acgtaccttc aacgatcttt atatgggtcg gtaagaaatg
     1261 tggatcttta attgaaaaag atgcacgagg ggcggtttgt cagattgttc gttatgaaaa
     1321 agttcaggga cctattgttg tagttaagga aggggcagaa ccttcatact tttgggatgc
     1381 tttttcgagt cttttacctt taatggataa atcaggcaat gtgatggata ttgctaagtt
     1441 ttctaaaatg accccgggtg agagatttgt tgactcatac aatgttgact ttgaaattat
     1501 tcagaaagcc atagttggtg ggtttgtgcc cccgtttgcg tcatctgaga ctgatcagga
     1561 aattcacctt cctgttagag aaagcagttg gagcgtattg agacgtaagt ttgcatttgg
     1621 aaacatgaag gaatttgtcg ctgcttctaa atcttcacca tcgacaatct atcctgattc
     1681 atttctacta acatcagaga agaattataa tttaaattca aattcaaatt taaattctag
     1741 ttcttcatcc aaaccagtta attattcttc aacatgttca ttatcatcat catcattgtc
     1801 accatctttt tcgtcttctt cgtcacctga ttccatatca tctgattcaa gcattagttc
     1861 caaatgtttt acagattctc ctgctgcatc accctcaata tcgtcataca ctaacgctta
     1921 ctcatcgaat ctatccactt tatcaaattt atcacttgtc ccaactaaac tttctcctca
     1981 ttctatatct aaaaactctg aatttattga tgtcaatttt acctcaaact cacgatcaca
     2041 ctcacactca gtcttatcac catcaaaaaa gtcttcactt tccattgctg aacgcagagg
     2101 cagcagtcca aaatgtctta aactactgat gccgacagat gattcatacg ttcaagatac
     2161 ttgtgtagcc actgaaccta cagaagatat tgttatagaa ttaaaactga agggattaaa
     2221 tcaagaatct ctaattcagg gttcttgttc gtcgtcttca aacatttcaa cagaaggagg
     2281 tgggtcccac tgtgaccgaa catctaaagc ttccgtagag gtgctcgagt ggcctagttt
     2341 ggagaaggtt acgggatttt atggcggtga taaggattcg actcgtgtat tcgtttttgt
     2401 cacttgtagt tcaagtcaag aaaaagatgg ggattctgtt ttgtatttat gggtgggaaa
     2461 ggctttcagg tatgactgca ggaatcttct tgagacaaac aaaagacgtg ctgagttacc
     2521 ggattcttcc gtgaaggaag tcattaacag cgttctttcc aaaatgggat tgtcaaagga
     2581 cactcacgtt aaggttgtga agcaagatga agaaccttca gagtttgttg cattactgag
     2641 ttctttgtag cccggtgtag ttatcagatg tcttgcacct ttccctaact tcctgtttct
     2701 cgtctattca tctttgacaa cattccagca aacgatgctg gaaaaatcgt cgagaacgtg
     2761 tcaaaggccc agctgcaaac tcacaaacca ttatggaatg cgggagtggt accgtttgtt
     2821 ttctaacctc ggcccattgt ttgtatatgt ctttgttaaa cagttttata taaactctaa
     2881 tttatgccta gtttaactga aagaatcgtt gattatcctt gataagtgat cctctattac
     2941 atgacaacta tttaatgcta agcatctcac gtagcaggca ctttcgtcta tcggtttcac
     3001 caaggtgcgt gttctttgtc aaaatgtaga ggtgggaaac gggcgggttg tgcaggttgg
     3061 ataataggtc aaaacaggta aatttggtat gcgtcacaac aggttggatc tgtttgggtt
     3121 gacatataac gttatttgtc caaaaatgtt ttctatttaa aatttgtgtg taaatgatgg
     3181 ttatgtttac ctggcatgct atttggtggc gacatgctac tcaatagatg taaaacattt
     3241 gctgaatcaa ctcgtttgga aagtaaatgg gtctaaagtg taacctagcc attttaatga
     3301 agttgatatg tagattttaa ctt
//
LOCUS       XM_071829661            3087 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein-tyrosine-phosphatase
            MKP1-like (LOC139839566), transcript variant X2, mRNA.
ACCESSION   XM_071829661
VERSION     XM_071829661.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3087
                     /gene="LOC139839566"
                     /note="protein-tyrosine-phosphatase MKP1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839566"
     CDS             218..2650
                     /gene="LOC139839566"
                     /codon_start=1
                     /product="protein-tyrosine-phosphatase MKP1-like"
                     /protein_id="XP_071685762.1"
                     /db_xref="GeneID:139839566"
                     /translation="MVGTDDDVHGESSKSDSLGSKLHNSASANRKYLRSASWSPSHVP
                     LPPLNPDSLKDQDVLNRRRPGPLIPRSNSKGRSCLPPLSIARRSLDEWPRAGSDDVGE
                     WPVPSTPSGTNGERLKLDLSSVQRVPDKNAGLVKRDKIAFFDKKCSKVAEHIYLGGDA
                     VARDKDILKQHKITHILNCVGFVCPEYFKGNFVYRTLWLQDSPSEDITSILYDVFDYF
                     EDVRDQNGKVFVHCCQGVSRSTSLVIAYRMWREGQSFDDAFQYVKAAREIADPNMGFA
                     CQLLQCQKRVHAFPLSPSSLLRLYRIAPHSSYDPLHLVPKMLNVPSPAGLDSRGAFIL
                     HVPSTIFIWVGKKCGSLIEKDARGAVCQIVRYEKVQGPIVVVKEGAEPSYFWDAFSSL
                     LPLMDKSGNVMDIAKFSKMTPGERFVDSYNVDFEIIQKAIVGGFVPPFASSETDQEIH
                     LPVRESSWSVLRRKFAFGNMKEFVAASKSSPSTIYPDSFLLTSEKNYNLNSNSNLNSS
                     SSSKPVNYSSTCSLSSSSLSPSFSSSSSPDSISSDSSISSKCFTDSPAASPSISSYTN
                     AYSSNLSTLSNLSLVPTKLSPHSISKNSEFIDVNFTSNSRSHSHSVLSPSKKSSLSIA
                     ERRGSSPKCLKLLMPTDDSYVQDTCVATEPTEDIVIELKLKGLNQESLIQGSCSSSSN
                     ISTEGGGSHCDRTSKASVEVLEWPSLEKVTGFYGGDKDSTRVFVFVTCSSSQEKDGDS
                     VLYLWVGKAFRYDCRNLLETNKRRAELPDSSVKEVINSVLSKMGLSKDTHVKVVKQDE
                     EPSEFVALLSSL"
     misc_feature    656..1060
                     /gene="LOC139839566"
                     /note="dual-specificity phosphatase domain; Region: DSP;
                     cd14498"
                     /db_xref="CDD:350348"
     misc_feature    <1193..1384
                     /gene="LOC139839566"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; Region: ADF_gelsolin; cl15697"
                     /db_xref="CDD:472830"
ORIGIN      
        1 cactcatctt tctttgcaac cagagacttc agtcttcccc ctcaattttc cctcacggtc
       61 ccataatctg tgtaatttca tttattaatt ttgtattagc atttaggttt agctacaaag
      121 acactgcgtg ttatactgac tattgataat ttgatataga tataaatata gatcagacag
      181 tgtgtatttt gagtgtggtt agggtttcgt tagtggaatg gtaggaacag atgatgatgt
      241 tcatggagaa agtagtaaaa gtgatagtct cggttcgaaa ttgcataatt cggcttctgc
      301 taataggaaa tatttgcgct cggcttcatg gtcgccatct cacgtgccat taccaccgct
      361 taatccagac agtttgaaag atcaggatgt tttgaataga agacgtcctg gtccgttaat
      421 tcctagatcg aatagtaaag gtaggtcgtg tttgccaccg ttatcaattg ctagacgtag
      481 cttagatgag tggccgagag ctggttcaga tgatgttggt gagtggcctg ttcctagtac
      541 acctagtggg actaatggtg aaagattaaa acttgatttg tcgtcagttc aaagagttcc
      601 ggataagaat gctggtttag tgaaaagaga taagattgcg ttttttgata agaagtgttc
      661 caaggttgct gaacatatct atcttggtgg tgatgctgtt gcaagggata aagatatact
      721 taaacaacat aagattactc atattctcaa ttgtgtagga tttgtctgtc cagaatattt
      781 taaaggaaat tttgtttatc gaactttgtg gttgcaagat agtccttcag aggatattac
      841 gagtatattg tatgatgttt ttgattactt tgaagatgtt agagatcaaa atggaaaagt
      901 ttttgtacat tgttgtcaag gggtgtctcg gtcaacgtct ttggtaattg cgtatcgtat
      961 gtggagagaa gggcaaagct ttgatgatgc ttttcaatac gtaaaggcag ctcgagaaat
     1021 tgctgatcct aatatggggt ttgcatgtca gttgttacag tgtcaaaaaa gggttcacgc
     1081 gtttccatta agtccaagct cgttacttag gttatataga attgcccctc actcgtcata
     1141 tgacccttta catcttgttc caaaaatgtt aaacgtacct tctccagcag gtttagattc
     1201 tagaggtgcg tttatcttgc acgtaccttc aacgatcttt atatgggtcg gtaagaaatg
     1261 tggatcttta attgaaaaag atgcacgagg ggcggtttgt cagattgttc gttatgaaaa
     1321 agttcaggga cctattgttg tagttaagga aggggcagaa ccttcatact tttgggatgc
     1381 tttttcgagt cttttacctt taatggataa atcaggcaat gtgatggata ttgctaagtt
     1441 ttctaaaatg accccgggtg agagatttgt tgactcatac aatgttgact ttgaaattat
     1501 tcagaaagcc atagttggtg ggtttgtgcc cccgtttgcg tcatctgaga ctgatcagga
     1561 aattcacctt cctgttagag aaagcagttg gagcgtattg agacgtaagt ttgcatttgg
     1621 aaacatgaag gaatttgtcg ctgcttctaa atcttcacca tcgacaatct atcctgattc
     1681 atttctacta acatcagaga agaattataa tttaaattca aattcaaatt taaattctag
     1741 ttcttcatcc aaaccagtta attattcttc aacatgttca ttatcatcat catcattgtc
     1801 accatctttt tcgtcttctt cgtcacctga ttccatatca tctgattcaa gcattagttc
     1861 caaatgtttt acagattctc ctgctgcatc accctcaata tcgtcataca ctaacgctta
     1921 ctcatcgaat ctatccactt tatcaaattt atcacttgtc ccaactaaac tttctcctca
     1981 ttctatatct aaaaactctg aatttattga tgtcaatttt acctcaaact cacgatcaca
     2041 ctcacactca gtcttatcac catcaaaaaa gtcttcactt tccattgctg aacgcagagg
     2101 cagcagtcca aaatgtctta aactactgat gccgacagat gattcatacg ttcaagatac
     2161 ttgtgtagcc actgaaccta cagaagatat tgttatagaa ttaaaactga agggattaaa
     2221 tcaagaatct ctaattcagg gttcttgttc gtcgtcttca aacatttcaa cagaaggagg
     2281 tgggtcccac tgtgaccgaa catctaaagc ttccgtagag gtgctcgagt ggcctagttt
     2341 ggagaaggtt acgggatttt atggcggtga taaggattcg actcgtgtat tcgtttttgt
     2401 cacttgtagt tcaagtcaag aaaaagatgg ggattctgtt ttgtatttat gggtgggaaa
     2461 ggctttcagg tatgactgca ggaatcttct tgagacaaac aaaagacgtg ctgagttacc
     2521 ggattcttcc gtgaaggaag tcattaacag cgttctttcc aaaatgggat tgtcaaagga
     2581 cactcacgtt aaggttgtga agcaagatga agaaccttca gagtttgttg cattactgag
     2641 ttctttgtag cccggtgtag ttatcagatg tcttgcacct ttccctaact tcctgtttct
     2701 cgtctattca tctttgacaa cattccagca aacgatgctg gaaaaatcgt cgaggtactt
     2761 tggcaaccta ttctttttgc tttgaaatta ttggtcttac ttttgtttgt tgtcttaaat
     2821 gagctggcta atgcttcttt ttcattctgt cttgtaagca tcttaagtaa agaaggcaat
     2881 ttggactaat ttacttatga atgggttgat tcagtttatg tgattctctt gtgtgtaaat
     2941 tggtataaat aaggaaaatc ttagaagaga acggtttaaa caggtcaaac aagttgagag
     3001 ctattaatct gtatccataa tgtataaaac ttttactttt tgtcaatata cctgacatta
     3061 ataatataaa attaaataga aaatatt
//
LOCUS       XM_071829662            2531 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ACTIVITY OF BC1
            COMPLEX KINASE 3, chloroplastic-like (LOC139839567), mRNA.
ACCESSION   XM_071829662
VERSION     XM_071829662.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2531
                     /gene="LOC139839567"
                     /note="protein ACTIVITY OF BC1 COMPLEX KINASE 3,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139839567"
     CDS             128..2254
                     /gene="LOC139839567"
                     /codon_start=1
                     /product="protein ACTIVITY OF BC1 COMPLEX KINASE 3,
                     chloroplastic-like"
                     /protein_id="XP_071685763.1"
                     /db_xref="GeneID:139839567"
                     /translation="MSTVTLNPASTTSPYVLYRNKPPSTTTGRKCRNRFRPKPLFAAL
                     VEETRPRVLPPINQQSISSSSIVPSSMRNRADDLQAESKALARAINVSAYSPELLKYK
                     YANRPFKVLQRTLQILVGLGSFGLKLWIDQLQGQLEQNQRSRAIELRETFTRLGPTFV
                     KIGQGLSTRPDLCPPAFLEELTELQDALPTFPDAEAFACIERELGIPLDTIYSSISSS
                     PIAAASLGQVYKAQLKYSEQYVAVKVQRPGIEEAIGLDFYLIRGLGFFINKYVDVVTS
                     DVVALIDEFARRVYQELNYVQEGQNARRFKKLYADKAEVLVPDIFWDYTSAKVLTMEW
                     VEGVKLNEQALIEGQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPDGKLA
                     FLDFGMMSETPEEARSAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN
                     FFDDALNSTVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNF
                     KVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFRWNRLENLLVQGKQDRDFSAKE
                     ALQPVLKLLLGPDGEELRTLVIKEAIRVTEAITIGTMIDTYNLIPGPLKTFFPNVNGI
                     GMPMTDAELASMMELREQVLRIWGLLRSSDNIDPTILQPILQVLQEPEARNLGGRVFG
                     GITQRLAARMLQQVLRSPTTARPTTS"
     misc_feature    446..1789
                     /gene="LOC139839567"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; Region:
                     AarF; COG0661"
                     /db_xref="CDD:440425"
     polyA_site      2531
                     /gene="LOC139839567"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctgcaattt caaccaatta aatcagacac acacaccaaa tttgatttcc gattactacc
       61 accaaacaaa ccatcaccag tccaccacca ccaccgtgaa taatactagt aacatttaac
      121 agtaataatg agtacagtaa ccctaaatcc agcttcaact acatctccct acgttctcta
      181 ccgtaacaaa ccaccgtcaa ccaccaccgg acgtaaatgt cggaacagat tcagaccgaa
      241 acccttattc gctgccttgg ttgaggaaac tagaccacgt gttttacctc cgattaatca
      301 gcaatcaatt tcttcttctt ctatagttcc gtcgtctatg agaaacagag ctgatgattt
      361 acaagctgaa tctaaagcat tggcccgcgc tattaatgtc tctgcttata gtccagaatt
      421 acttaaatat aaatatgcaa atcgtccgtt taaggtatta cagaggactt tgcaaattct
      481 tgttggattg ggctcattcg gattgaaatt atggatagac cagttgcaag gacaactgga
      541 acagaatcag agatcaagag ctattgagtt gagggagact ttcactaggt taggtcctac
      601 ttttgttaaa attggtcagg gactatctac tagacccgat ctttgtccac ctgcattcct
      661 tgaagaactc actgaactcc aggatgcatt accaacattt ccagatgcag aggcatttgc
      721 atgcattgaa agagaacttg ggattccact tgataccatc tactcatcaa tctcatcatc
      781 tccaattgct gcagccagtt tgggtcaagt ttataaagcc cagctcaagt attctgaaca
      841 atatgttgct gtgaaggtgc aaaggcctgg tatcgaggaa gctattgggc tagactttta
      901 ccttataagg ggtctaggct tctttataaa taaatatgtt gatgtagtta ccagtgatgt
      961 tgttgctttg atcgacgaat tcgcacgcag agtttatcaa gagttgaact atgttcagga
     1021 gggacaaaat gcaagaagat tcaaaaagtt atacgccgac aaagcagaag tactcgtccc
     1081 cgacatcttc tgggactaca caagtgcaaa agtattaact atggaatggg ttgaaggagt
     1141 caaactcaac gaacaagccc taatcgaagg tcaagggtta aaagtcttgg acctggtcaa
     1201 cacaggtatt caatgcagtc ttagacagtt actagaatac ggttactttc acgcagatcc
     1261 tcatcctggt aatctattag caacacccga tggtaaactt gcttttcttg attttggtat
     1321 gatgagtgaa acacccgaag aagcacgatc tgcaataatt ggtcatgttg ttcatatggt
     1381 taatcgggat tatgaagcaa tggcacgcga ttattatgct ttggattttt tgtcgcctga
     1441 tgttgatgtg accccaattg taccggcact tagaaacttt tttgatgatg cgttgaattc
     1501 gactgttagt gagttgaatt ttaaaacgat tgtggatgga cttggtgctg tgttgtatca
     1561 gtacccgttt aatgtcccgg cttattatgc attgatactt aggtcactta ctgttctaga
     1621 aggtttagca ctttatgccg atcctaattt taaggttcta gcagcttctt atccgtattt
     1681 tgcgaaaaga ttgctcacgg atccaaatcc gtacctaaga gatgccctta ttgagctact
     1741 attcaaggat ggaaaattca gatggaacag actcgaaaac ctgcttgtgc aggggaaaca
     1801 ggatagagat ttttctgcaa aagaagcgtt acaacccgtt ttgaaactat tattgggtcc
     1861 cgatggtgag gagctgagga cgttagttat taaggaggct atccgggtaa ctgaagcaat
     1921 cactattgga accatgatcg atacatacaa tttaattccg gggcctttga agacattttt
     1981 tcccaatgtg aacggaatcg gtatgcccat gacggatgct gagttggcga gcatgatgga
     2041 gcttagagaa caagttttaa ggatatgggg gcttttacgg tcgtcagata atattgaccc
     2101 tactatccta caaccaattc tacaggtact tcaagaaccc gaggcacgaa atcttggagg
     2161 tcgagtattt ggtggaataa cacagcgtct tgctgcacga atgctgcaac aagttcttcg
     2221 ctcacctaca accgctcgcc caacaacttc gtaggagatt caacataggt aaatctgtat
     2281 gaggatgatc aatatattat aaatttaatg tccggttatt atattctttg aaactgtgga
     2341 taatagataa tagatataga ttcaatagat aatagatgta atggaaaagt tatactgtta
     2401 tagtttgatt gcaagttggg gacattcatg aaagataacc atttatacaa atgagttgta
     2461 cctcatatga cattttgggc attgccctcc taaatggttc tccggataat aaactaggaa
     2521 cttttatttt a
//
LOCUS       XM_071829663            1892 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides APETALA2-like protein 2
            (LOC139839568), transcript variant X1, mRNA.
ACCESSION   XM_071829663
VERSION     XM_071829663.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1892
                     /gene="LOC139839568"
                     /note="APETALA2-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839568"
     CDS             310..1734
                     /gene="LOC139839568"
                     /codon_start=1
                     /product="APETALA2-like protein 2 isoform X1"
                     /protein_id="XP_071685764.1"
                     /db_xref="GeneID:139839568"
                     /translation="MLDLNITDASDDADVLISVNDSVISNPDDRIDQLDDRQSEIHSG
                     TSSVSSDVDDPLILTNAIEPDDEDEISNEKASGGGLITRQFFPVDNCELMIEDDEVLC
                     LRSISSSASVFGSQWLNLKVPETEHVPEKLSVMPVPQQAKKSRRGPRSRSSQYRGVTF
                     YRRTGRWESHIWDCGKQVYLGGFDTALAAARAYDRAAIKFRGIDADINFHINEYEEDM
                     LQAKNLSKEEFIHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKYVYLGLF
                     DNEVEAARAYDKAAIKCNGREAVTNFEPSIYGADITSGHDLDLNLRVSPSIESQKEFH
                     KVPNVDMYLTTACEFPSDKRLKVQDRPQTLVPKNYPVWTNMYSGVTPKFEDTMIGHGS
                     TGLSNSAWQMQKHMQIQAHVSRSHGVAHPFPVSATAASSGFSSSTPMYPTSILQSHNN
                     KTYHDTSIQMPMSTSIYYSNNQIG"
     misc_feature    769..957
                     /gene="LOC139839568"
                     /note="DNA-binding domain found in transcription
                     regulators in plants such as APETALA2 and EREBP (ethylene
                     responsive element binding protein). In EREBPs the domain
                     specifically binds to the 11bp GCC box of the ethylene
                     response element (ERE), a promotor...; Region: AP2;
                     cl00033"
                     /db_xref="CDD:444663"
     misc_feature    order(775..780,784..786,793..795,799..801,805..807,
                     817..819,823..825,838..840,844..846,853..855)
                     /gene="LOC139839568"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     misc_feature    1045..1230
                     /gene="LOC139839568"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(1051..1056,1060..1062,1066..1068,1072..1074,
                     1078..1080,1090..1092,1096..1098,1117..1119,1123..1125,
                     1132..1134)
                     /gene="LOC139839568"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     polyA_site      1892
                     /gene="LOC139839568"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attagcgtac caacctataa tcaccaaaac caaccatctc tctttgactt tcaactgttc
       61 tggttacaca cactaaaaat gtgtttgtgt gtgtaattct aaaaaaaagc ttgttagatt
      121 tcatctccct ccaaattctc tctcagatct ctcacacaca gttacatata tgatctttac
      181 gtttacgtag tcgccattcg atcgattgca taatcgagct atagatatag tcatattgat
      241 acagctcacg tacagtcagg ttaatatata cgtatagtga tcgatcgaca tacatcttga
      301 gaaattaata tgttagatct taatataact gatgcgtctg atgatgcgga tgtattaata
      361 tcagttaatg attctgtaat tagtaatcct gacgatcgga ttgatcaatt ggatgatcgt
      421 caatcggaga ttcattcagg tacttcatca gtttcatcag atgttgatga tcctttgatt
      481 ttgacaaatg ctattgaacc tgatgatgaa gatgagattt cgaatgaaaa agcatctggt
      541 ggtggtttga ttactagaca gttttttccc gttgataatt gtgaattgat gattgaggat
      601 gatgaggttt tgtgtttgcg ttcgataagt tcgtctgcga gtgtgtttgg atcgcaatgg
      661 ttgaatctta aggtacctga aacggagcac gtgccggaaa agttgtcagt gatgccggtg
      721 ccgcagcagg cgaagaaaag tcggcgagga ccgaggtctc gaagctcgca gtatcgtggt
      781 gtgacgtttt atcgtcggac gggtcgttgg gagtcacata tatgggattg tgggaaacaa
      841 gtgtatttag gtgggtttga tacagctctg gctgcagcta gagcttatga ccgggctgct
      901 atcaagttcc gaggaattga tgctgatata aactttcata taaacgaata tgaggaagat
      961 atgttacagg caaagaattt gtcaaaagaa gaatttatcc atatactgcg ccgacagagt
     1021 acaggattct cgagaggatc ttcgaagtac cgaggagtaa cccttcataa atgcggcaga
     1081 tgggaggctc gcatgggtca gcttcttgga aaaaagtatg tttaccttgg attattcgac
     1141 aacgaagtag aagctgcaag ggcgtacgac aaagctgcca ttaaatgtaa tggtcgagag
     1201 gccgtcacta attttgagcc aagcatctat ggggcggata taacaagtgg acacgatctt
     1261 gatctcaacc tcagggtatc tccatccatc gagagtcaaa aggaatttca caaggttccg
     1321 aatgtggata tgtatttaac aacagcttgt gaatttcctt ctgataaaag actgaaggta
     1381 caggatcgcc cacaaacact ggtaccaaag aactatcccg tatggactaa catgtattct
     1441 ggtgttacac cgaaatttga ggacacaatg ataggacatg gatctactgg actatcaaac
     1501 tcagcatggc aaatgcagaa gcatatgcaa attcaagcac acgtgtcaag aagccatggt
     1561 gtggctcatc catttcccgt ttccgctact gcagcatcat caggattctc atcttccaca
     1621 cccatgtatc cgacttcaat tctccagtca cataacaaca aaacatatca tgatacttcc
     1681 atccaaatgc ctatgagtac ttccatatac tatagtaata accaaattgg ttaaagcgtg
     1741 tcatgttcaa ataccaaagc acaaagactc atcgattatg aagttgcttc tgatattaaa
     1801 gctcactggc atacgtactc acatattttg tttctgcttg tgtgtataaa caaactacat
     1861 cttagtgtga agccttatag tgatcaaaca ca
//
LOCUS       XM_071829664            1847 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides APETALA2-like protein 2
            (LOC139839568), transcript variant X2, mRNA.
ACCESSION   XM_071829664
VERSION     XM_071829664.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1847
                     /gene="LOC139839568"
                     /note="APETALA2-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839568"
     CDS             310..1689
                     /gene="LOC139839568"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     RAP2-7-like isoform X2"
                     /protein_id="XP_071685765.1"
                     /db_xref="GeneID:139839568"
                     /translation="MLDLNITDASDDADVLISVNDSVISNPDDRIDQLDDRQSEIHSG
                     TSSVSSDVDDPLILTNAIEPDDEDEISNEKASGGGLITRQFFPVDNCELMIEDDEVLC
                     LRSISSSASVFGSQWLNLKVPETEHVPEKLSVMPVPQQAKKSRRGPRSRSSQYRGVTF
                     YRRTGRWESHIWDCGKQVYLGGFDTALAAARAYDRAAIKFRGIDADINFHINEYEEDM
                     LQAKNLSKEEFIHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKAYDKAAI
                     KCNGREAVTNFEPSIYGADITSGHDLDLNLRVSPSIESQKEFHKVPNVDMYLTTACEF
                     PSDKRLKVQDRPQTLVPKNYPVWTNMYSGVTPKFEDTMIGHGSTGLSNSAWQMQKHMQ
                     IQAHVSRSHGVAHPFPVSATAASSGFSSSTPMYPTSILQSHNNKTYHDTSIQMPMSTS
                     IYYSNNQIG"
     misc_feature    769..957
                     /gene="LOC139839568"
                     /note="DNA-binding domain found in transcription
                     regulators in plants such as APETALA2 and EREBP (ethylene
                     responsive element binding protein). In EREBPs the domain
                     specifically binds to the 11bp GCC box of the ethylene
                     response element (ERE), a promotor...; Region: AP2;
                     cl00033"
                     /db_xref="CDD:444663"
     misc_feature    order(775..780,784..786,793..795,799..801,805..807,
                     817..819,823..825,838..840,844..846,853..855)
                     /gene="LOC139839568"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     misc_feature    1045..1185
                     /gene="LOC139839568"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     polyA_site      1847
                     /gene="LOC139839568"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attagcgtac caacctataa tcaccaaaac caaccatctc tctttgactt tcaactgttc
       61 tggttacaca cactaaaaat gtgtttgtgt gtgtaattct aaaaaaaagc ttgttagatt
      121 tcatctccct ccaaattctc tctcagatct ctcacacaca gttacatata tgatctttac
      181 gtttacgtag tcgccattcg atcgattgca taatcgagct atagatatag tcatattgat
      241 acagctcacg tacagtcagg ttaatatata cgtatagtga tcgatcgaca tacatcttga
      301 gaaattaata tgttagatct taatataact gatgcgtctg atgatgcgga tgtattaata
      361 tcagttaatg attctgtaat tagtaatcct gacgatcgga ttgatcaatt ggatgatcgt
      421 caatcggaga ttcattcagg tacttcatca gtttcatcag atgttgatga tcctttgatt
      481 ttgacaaatg ctattgaacc tgatgatgaa gatgagattt cgaatgaaaa agcatctggt
      541 ggtggtttga ttactagaca gttttttccc gttgataatt gtgaattgat gattgaggat
      601 gatgaggttt tgtgtttgcg ttcgataagt tcgtctgcga gtgtgtttgg atcgcaatgg
      661 ttgaatctta aggtacctga aacggagcac gtgccggaaa agttgtcagt gatgccggtg
      721 ccgcagcagg cgaagaaaag tcggcgagga ccgaggtctc gaagctcgca gtatcgtggt
      781 gtgacgtttt atcgtcggac gggtcgttgg gagtcacata tatgggattg tgggaaacaa
      841 gtgtatttag gtgggtttga tacagctctg gctgcagcta gagcttatga ccgggctgct
      901 atcaagttcc gaggaattga tgctgatata aactttcata taaacgaata tgaggaagat
      961 atgttacagg caaagaattt gtcaaaagaa gaatttatcc atatactgcg ccgacagagt
     1021 acaggattct cgagaggatc ttcgaagtac cgaggagtaa cccttcataa atgcggcaga
     1081 tgggaggctc gcatgggtca gcttcttgga aaaaaggcgt acgacaaagc tgccattaaa
     1141 tgtaatggtc gagaggccgt cactaatttt gagccaagca tctatggggc ggatataaca
     1201 agtggacacg atcttgatct caacctcagg gtatctccat ccatcgagag tcaaaaggaa
     1261 tttcacaagg ttccgaatgt ggatatgtat ttaacaacag cttgtgaatt tccttctgat
     1321 aaaagactga aggtacagga tcgcccacaa acactggtac caaagaacta tcccgtatgg
     1381 actaacatgt attctggtgt tacaccgaaa tttgaggaca caatgatagg acatggatct
     1441 actggactat caaactcagc atggcaaatg cagaagcata tgcaaattca agcacacgtg
     1501 tcaagaagcc atggtgtggc tcatccattt cccgtttccg ctactgcagc atcatcagga
     1561 ttctcatctt ccacacccat gtatccgact tcaattctcc agtcacataa caacaaaaca
     1621 tatcatgata cttccatcca aatgcctatg agtacttcca tatactatag taataaccaa
     1681 attggttaaa gcgtgtcatg ttcaaatacc aaagcacaaa gactcatcga ttatgaagtt
     1741 gcttctgata ttaaagctca ctggcatacg tactcacata ttttgtttct gcttgtgtgt
     1801 ataaacaaac tacatcttag tgtgaagcct tatagtgatc aaacaca
//
LOCUS       XM_071829665            1831 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pectinesterase 2-like
            (LOC139839569), mRNA.
ACCESSION   XM_071829665
VERSION     XM_071829665.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1831
                     /gene="LOC139839569"
                     /note="pectinesterase 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 105
                     Proteins"
                     /db_xref="GeneID:139839569"
     CDS             92..1645
                     /gene="LOC139839569"
                     /codon_start=1
                     /product="pectinesterase 2-like"
                     /protein_id="XP_071685766.1"
                     /db_xref="GeneID:139839569"
                     /translation="MKTFPNLVTLLVPCLFIISSTVYGDTNPEISSWCAQTPHPESCE
                     YFLAENKDSEPLNHKPDFIRALIKITLKRAEHAESNTRGLGPKCRNKLEKSAWEDCCE
                     LYENTVQRINMTIDPHKPCSKYEMQTWLSTALTDLETCRAGFQELGVGGQLLPLISNN
                     NVSKLISNTLAMNKGGSEPASYSNGFPTWVKPGDRKLLQSSSPTPNVVVAQDGSGNFK
                     TIGEAITAAGKRSGSSRYVIHVKAGTYKENVEIGTKLTNIMLTGDGIGKTIITGSKSV
                     GGGATTFKSATVAVDGDGFISRGITYRNTAGPQNHQAVALRSDSDLSVFYQCSFEGYQ
                     DTLYTHANRQFYKQCDIYGTVDFIFGNAAVVFQNCNIYARNPPNKVNTVTAQGRTDPN
                     QNTGTVIQNSRVLAASDLSGSTGSVKTYLGRPWKQYSRTVIMETNLDSVVDPAGWLPW
                     SGNFALDTLYYGEYLNTGPGSSTANRVTWKGYHVISSATEAAKYTVGNFIAGGSWLPA
                     TNVPFTSGL"
     misc_feature    185..622
                     /gene="LOC139839569"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; Region: PMEI-like_3;
                     cd15798"
                     /db_xref="CDD:275442"
     misc_feature    order(395..400,407..409,419..421,470..472,506..508,
                     611..613)
                     /gene="LOC139839569"
                     /note="putative heterodimer interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:275442"
     misc_feature    707..1597
                     /gene="LOC139839569"
                     /note="Region: Pectinesterase; pfam01095"
                     /db_xref="CDD:395871"
     polyA_site      1831
                     /gene="LOC139839569"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcaaacattc atctcacaag ttcacgtaca actaaataac tctaaacctc tcatctatct
       61 attagcaata taatttgcac gctttgttaa gatgaaaacc tttccaaatt tggtaaccct
      121 actcgttcca tgtctattta tcatctcttc gactgtttat ggcgacacaa atccagaaat
      181 tagttcatgg tgtgcccaaa cacctcatcc agaatcttgc gagtatttct tggccgaaaa
      241 taaagattcc gagccgttga atcacaaacc tgactttatc agggcattaa tcaaaataac
      301 actaaaaaga gcagaacatg ccgagtcaaa cactcgtggt ctcggcccaa aatgtcggaa
      361 caagcttgaa aaatctgcat gggaagactg ctgcgagctt tacgaaaaca cggttcagag
      421 gatcaacatg actattgatc ctcataaacc gtgtagcaag tatgaaatgc aaacctggct
      481 gagcacagcc cttacagatc ttgagacttg tagggctggg tttcaagaac taggcgttgg
      541 tggccagttg ttgccactaa taagtaataa taatgtttcg aaattaatta gcaatacttt
      601 agcaatgaat aaaggaggat cagagccagc tagttacagc aatggtttcc cgacatgggt
      661 taagcccggt gatcgtaaac tgttacaatc ttcgagtcct actcctaatg ttgtggtggc
      721 tcaagatggt tcaggcaact ttaagacaat tggagaagcg attactgccg cgggcaaaag
      781 gtcgggcagt agtaggtatg tgatacatgt gaaggcgggc acctacaagg agaatgtcga
      841 aatcggtaca aaattaacaa acataatgct aactggagat ggtatcggaa aaactatcat
      901 caccggtagc aaaagtgttg gaggaggtgc taccactttc aaatctgcca cagttgctgt
      961 tgatggggac gggtttatat ctcgaggcat cacctataga aacacggccg gaccacaaaa
     1021 ccaccaagcc gtagcgcttc gaagtgattc cgatctctca gttttctacc aatgcagctt
     1081 cgaaggttac caagacacgc tctacaccca cgctaacaga cagttctata aacaatgtga
     1141 catatacgga acagttgatt tcatatttgg taacgcagcc gtagtatttc aaaactgcaa
     1201 tatttacgca cgtaatcctc caaacaaagt aaataccgtg acagcacaag gccgaactga
     1261 tcctaaccaa aacaccggaa ccgtaataca aaattctcgt gtattggctg catcggacct
     1321 atcaggttcc acggggtccg ttaagacgta cctcggtaga ccatggaagc aatattctag
     1381 gactgttatt atggaaacaa acctcgatag tgttgtggac cctgctggat ggttaccttg
     1441 gagcggaaat tttgcactgg atacattgta ttatggagag tacttaaaca ccgggccggg
     1501 ttcatcaact gcgaatcggg ttacttggaa gggttaccat gtgattagta gtgctactga
     1561 ggctgcaaag tatacggttg gtaacttcat tgcgggtgga tcttggttgc cagcgactaa
     1621 cgtaccattt acttctggtc tttaagtaaa ttgatcatat gatatggtag tagattaata
     1681 aattgttgat ttgatatata taattggtta ttatttacat tgttaaaaaa gctcaaaaat
     1741 aagtggctgg tagttgaaaa gtccagcgtt aaataatttg gaatatattc tttgtcatac
     1801 cttttataaa gagattttaa tttaaagttt a
//
LOCUS       XR_011756984             307 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839570), ncRNA.
ACCESSION   XR_011756984
VERSION     XR_011756984.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..307
                     /gene="LOC139839570"
                     /note="uncharacterized LOC139839570; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839570"
     ncRNA           1..307
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839570"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839570"
ORIGIN      
        1 aattcaagct ctaaaagtgt tcttgtacat taataattga attctaacaa gttgatacag
       61 aagaggagaa gactcggtga tattagacta ccgagttttg ctggcgatcg gtttaggtat
      121 tgatgctttg ttaaggaagg gcggacgtga agacatgttt cacatggttg aactctgatg
      181 atgttttata ataaaatgga tgttttaacg taacccggat ttagatgtat taagtaagat
      241 ttactacggt tttatgtaat gtattaatgt gggtgtgttt aattattaaa atctatttta
      301 tatatct
//
LOCUS       XM_071829666            1305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
            2-like (LOC139839571), mRNA.
ACCESSION   XM_071829666
VERSION     XM_071829666.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1305
                     /gene="LOC139839571"
                     /note="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839571"
     CDS             136..1044
                     /gene="LOC139839571"
                     /codon_start=1
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase 2-like"
                     /protein_id="XP_071685767.1"
                     /db_xref="GeneID:139839571"
                     /translation="MCSSWWRTTNCANLAHDNINSYDNINSIINNNNIKNNNNNKLGF
                     RGSKILKYSALNGGSRVSMGSVNNHNGDDKLITENDRVMSTLSSENHGNVKSTPLKQN
                     PADRLLTLPTILTIARVAAIPVLVRTFYMNSWLGTTATTSIFIAAAITDWLDGYLARK
                     MNLGTAFGAFLDPVADKLMVATTLILLCTKPPEAAMFGQWPWLLTVPSIAVIGREITM
                     SAVREWAASQGSKLSGAVAVNNLGKWKTATQMTSLTILLAIRDQSFTEVGLLGTSGVA
                     LLYVSAWLAIWSLVVYMKKISKVLLM"
     misc_feature    436..1038
                     /gene="LOC139839571"
                     /note="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase; Region: PRK10832; cl00453"
                     /db_xref="CDD:469774"
     polyA_site      1305
                     /gene="LOC139839571"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acccacacac attcgcaaat tacgcccttt aaccttctaa aactaaccat cgtttattcc
       61 tttcacctcc accaccaaca acggtggctc cgcggcgcaa tcatcaccgg aagatctacg
      121 aagacgtccc cggcgatgtg ctcgagctgg tggaggacaa caaattgtgc aaacttagct
      181 cacgataata ttaatagcta cgataatatt aacagtatca ttaataataa taatattaag
      241 aataacaata acaacaagct agggtttcgt ggttcaaaaa ttttgaaata ttcagcatta
      301 aacggtggta gtagagtgag tatgggatcc gtaaacaatc ataatggaga tgataaattg
      361 atcacggaaa atgatcgtgt tatgtctaca ttatcgtcgg agaatcacgg caacgtaaaa
      421 tctacgccgt taaaacaaaa tccggcggat agattgctga cgttgccaac gattttaaca
      481 attgctcgcg ttgctgcgat cccggtcctt gttagaacgt tttatatgaa tagttggctg
      541 gggacaactg ctactacaag catcttcatt gctgcagcta tcaccgattg gctagatggt
      601 tatcttgcac gaaaaatgaa cctaggaact gcctttggtg catttttaga tccagtggct
      661 gacaagctta tggttgctac taccttgata ttgttatgta caaaacctcc agaagctgct
      721 atgtttggac aatggccttg gctattgact gtaccatcga ttgcggtaat aggtagagag
      781 ataacgatgt ctgcagttag agaatgggct gcttcacagg gtagtaaact ttcaggggct
      841 gttgctgtaa ataatttggg gaagtggaaa acagccacac aaatgacgtc gttaactatt
      901 cttcttgcca ttagagatca aagttttaca gaagtaggat tactgggaac atctggtgtt
      961 gctttacttt acgtatcggc atggctagct atatggtcgt tggttgtgta tatgaagaag
     1021 atatccaaag tgttgctgat gtaagaatta gaaaggaaaa aaaaaacatt cacaattgct
     1081 tcgacccatt gcttccgacc tgaagctact gtccttttac tcgagttttc ttatattttg
     1141 ccatactata tgctttacag aattcctatg gtagttcaga tatcaatttg ttgtactcat
     1201 gttgatgttt ttgttctgtc aaggaaacca actatatatg aaacaaatta tttttttgtt
     1261 gtctgggtat acaccctcga tataatatat gtttattatt tatta
//
LOCUS       XM_071829667            1628 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-hydroxyisobutyryl-CoA
            hydrolase-like protein 1, mitochondrial (LOC139839572), mRNA.
ACCESSION   XM_071829667
VERSION     XM_071829667.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1628
                     /gene="LOC139839572"
                     /note="3-hydroxyisobutyryl-CoA hydrolase-like protein 1,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 21 Proteins"
                     /db_xref="GeneID:139839572"
     CDS             233..1477
                     /gene="LOC139839572"
                     /codon_start=1
                     /product="3-hydroxyisobutyryl-CoA hydrolase-like protein
                     1, mitochondrial"
                     /protein_id="XP_071685768.1"
                     /db_xref="GeneID:139839572"
                     /translation="MQILTRRRAIHQFSRIFLDQFKRTATSVSSISNINTSPSNQSRI
                     GDSESSVLVEGHAYSRTVVFNRPSSLNALNTDMGNRLQKLYRSWEDTPNIGFVVMKGS
                     GRAFSAGGDIVFLYDKMKKGNIEECKEFFWALYNFMYLVGTYLKPHVAILDGITMGGG
                     AGVSIPGTFRVATDKTVFSTPETLIGFHPDAGASFHLSHLPGYLGEYMALTGDRLNGV
                     EMIACGLATHYSPSANVPAIEECLNNLITDDPSVVETAIQKYSDLDYPSNASVIRRIE
                     TLDKCFSCDTVEEIIDALESEAAKTNDGWCSYTLKKLKCASPLSLKVALRSIREGRIQ
                     TFDQCLVREYRMSLQAISRQISNDFYEGVRARVVDKDFAPKWDPPSLEQVSQDMVDQY
                     FSPLSALEPELNLPTKQREAFM"
     misc_feature    350..1474
                     /gene="LOC139839572"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; Region:
                     crotonase-like; cl23717"
                     /db_xref="CDD:474030"
     misc_feature    order(440..442,446..448,542..544,554..568,695..697,
                     701..709,773..778,785..787)
                     /gene="LOC139839572"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:119339"
     misc_feature    order(560..562,707..709)
                     /gene="LOC139839572"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     misc_feature    order(647..649,671..673,734..745,779..790,806..808,
                     812..820,824..829,842..844,848..853,857..862,869..871,
                     902..904,911..913)
                     /gene="LOC139839572"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119339"
ORIGIN      
        1 tacacataca cgcatcttcg gttcttatct ataaaacata aaaaggcatt ataaatttgg
       61 taactaagtt cgtgtgtttg gtaattgagc tttgagcgag agaacataaa aagaaagtac
      121 tataatgccg ttagataaat aatcttcaaa acgaatcaat acgattgtca atgttgcaag
      181 cattcgaggt ctcgaggacg agtttaggaa tcaaatcatc aaacagtgag agatgcagat
      241 tttaacgaga cgacgtgcaa ttcatcaatt ttctcgaatc ttcctcgatc aattcaaacg
      301 aactgcaaca agcgttagca gtatcagcaa catcaacact tctccctcaa atcaatcacg
      361 aatcggtgat tctgaatcct ctgtattagt agaaggacat gcgtattcca gaaccgtagt
      421 ttttaataga ccttcatctc tcaatgcgct caacactgat atgggaaaca ggttgcagaa
      481 gttatataga agttgggaag atactcctaa tataggtttt gttgttatga agggaagtgg
      541 cagggcgttt tctgctggtg gagatatagt ttttctctat gataagatga aaaaaggaaa
      601 tattgaagaa tgcaaggaat tcttctgggc actctataat tttatgtatc ttgtaggtac
      661 atatttaaag ccacatgtgg ctatattgga tgggattaca atgggtggag gggctggtgt
      721 ttccattcct ggaactttca gggttgcaac tgataaaact gttttttcta cacctgaaac
      781 cttaattggt ttccatccag atgcgggggc ttcttttcac ctttcacatc ttcctggtta
      841 tttaggggag tatatggctc tcacaggtga caggctgaat ggagtagaaa tgattgcttg
      901 tggacttgct acacactatt caccgagtgc aaacgttccc gccattgaag aatgtctcaa
      961 caatttgata actgacgatc catctgttgt tgaaactgct attcaaaagt acagtgacct
     1021 tgactacccc tcgaatgcca gcgttatccg gaggattgaa actctcgaca aatgttttag
     1081 ctgtgatacc gttgaggaaa tcattgatgc attggaaagt gaagctgcca aaactaatga
     1141 tggatggtgc agttacacgt tgaagaaact aaagtgtgcc tcaccactga gcttgaaggt
     1201 tgccttgaga tctatacgag aaggccgaat tcagactttt gatcaatgcc tggttcggga
     1261 atatcggatg tccttgcaag ctatttctag acagatatca aatgattttt atgagggtgt
     1321 tcgggcacga gtggtggata aagattttgc accgaagtgg gaccctccaa gcttagaaca
     1381 agtatcgcaa gacatggtgg atcaatactt ctctccactc agtgcactcg agcctgaact
     1441 aaatttgcct acgaagcagc gagaggcatt tatgtaaagc caagattaaa agttagaatt
     1501 aggtagcgtt ttgcattgtt taggcttttg tttaaggagc tcctcatgtt tgctattata
     1561 cctgtaaatt gaaacatcac tcagttttgg gtgatttgta tatcagaatt gtcaaaaaaa
     1621 aaaaaaaa
//
LOCUS       XM_071829668            3341 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839573), mRNA.
ACCESSION   XM_071829668
VERSION     XM_071829668.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3341
                     /gene="LOC139839573"
                     /note="uncharacterized LOC139839573; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839573"
     CDS             144..2819
                     /gene="LOC139839573"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685769.1"
                     /db_xref="GeneID:139839573"
                     /translation="MKKGRKHVVLLKADKKGKIVSKKAESEDMVVDLGFNGVVKQSSD
                     TCDQVMEDVTLDKSGNGPVVEGSRKPSNEATKAEVVGPNVERRTPKWSKSLIRKERDK
                     LKKLVKVGTGEGNVDESIKYEEHGNTRNKSFQSIIEVTMNDAQNSKRSSTVETVKRAT
                     DSVKEGTDAGLDSTKVLDSVIKVDELVAVENLAAKDEAHEDENSEIGKEERSESTIEA
                     DTDIVRKINDELKKEPQIIEEEIDVADKKKELEIGLTKEVADADHVIDETTEKKDEVS
                     ESLTVANVGSEEDDVEVVEEGLEEKDEVHEVVNSGTEEILTTERSELGITELDDVAAT
                     DDDDAGMDIDEVLGWKDELDEQKVDPTNLSTMDENVEVEEKEIDTLEAKQLYETAVSF
                     HQSRYFLAPENEGEFSVFDLVWGKIRSYPWWPGQIFDPSDASEKAMKHHKKDCFLVAY
                     FGDRTCAWNESTALKPFRSTFSQIANRTNSEAFNNAVHCALQEVSRRVELGLACSCIP
                     REIYENIKCQIVENAGIKQESSKRQGIDKSASVNSFEPDKLVDYVRLLAKFPYGESDK
                     MELTMAIAQLSSYGRYKRYCQLAEFQLCGDISEADQVMNDATFIDDGSKKRKALDSIS
                     DEPVETAKPSFKVGACSQKVESQQTGPLLKGKPVDQVVSDQAQLLSQLYLAARDPIKG
                     HDFLNTIVPFFNSHRAAILNKIRQDSVNTKKRKASNENDLEEFGFDDYWTDRIVQNNP
                     NEQLSQEHQNGDRVHQTVKPTRRSNKKRFFSSNYEIEAKEQLELIERRRLNLETELLM
                     KFTEGIYFPSEVHLNKIFKRFGPLMESETKVDRQNGRARVVFKKCSDAEVAHNSAGKF
                     NIFGSILVNFELNYTPLISYKPCPLPPAQDTTDAC"
     misc_feature    <156..965
                     /gene="LOC139839573"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    1374..1622
                     /gene="LOC139839573"
                     /note="PWWP (Pro-Trp-Trp-Pro) domain; Region: PWWP;
                     cd05162"
                     /db_xref="CDD:438958"
     misc_feature    order(1401..1403,1410..1412,1491..1493)
                     /gene="LOC139839573"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:438958"
     misc_feature    1404..1415
                     /gene="LOC139839573"
                     /note="PWWP sequence motif; other site"
                     /db_xref="CDD:438958"
ORIGIN      
        1 ttcaagaatt catattatca gtgaaagttg gttggggtca attgccccca taaacctaaa
       61 cgttgctccg ccacttaaca aaatacggta tagttaatta aagattcaat tgtgtcctta
      121 gttgatccgc taactgtaaa aacatgaaaa aaggtagaaa acatgttgtg ttgttgaaag
      181 ctgataaaaa aggtaaaatt gtaagtaaga aagctgaaag tgaggatatg gtggtcgatt
      241 tagggtttaa tggtgttgtg aaacagagtt ccgatacttg cgatcaggtt atggaagatg
      301 taactttaga caaatctggg aatggtccag tagtggaagg ttctagaaaa ccgtccaacg
      361 aggcgactaa agctgaggtg gtgggaccaa atgtagagcg aagaacccca aagtggtcaa
      421 agtcgttaat caggaaagag agagataaat tgaaaaaact ggtcaaagtg ggaacaggtg
      481 aaggtaatgt tgatgagagc attaaatatg aggaacatgg aaacacgagg aacaagagtt
      541 ttcagtcaat aatcgaggtt acaatgaatg atgctcaaaa ttcaaaaaga agttcgactg
      601 tggagacagt taaacgggct acagattctg ttaaagaagg tactgatgca ggtttggatt
      661 ccacaaaggt tttagactct gtgataaaag ttgatgaatt ggttgcagtg gagaatttag
      721 ctgctaaaga tgaagctcac gaggatgaga actctgaaat tggcaaagaa gaaagatcag
      781 agtcaacaat agaagctgat acagatattg ttcgcaagat aaatgatgaa ttaaagaaag
      841 aacctcaaat tattgaagag gaaattgatg tagcagataa aaaaaaagaa cttgaaatag
      901 gtttgaccaa agaagtggct gatgcagacc atgtgataga tgaaacaact gaaaaaaaag
      961 atgaagtttc agagtcatta actgtggcca atgttggctc agaagaagat gatgtggagg
     1021 ttgttgaaga aggtttagaa gaaaaagatg aagttcatga ggttgttaat tcaggaacag
     1081 aggaaatttt gacaactgaa agatctgaac ttggcatcac tgaacttgat gacgtggcag
     1141 ctactgatga tgatgatgct ggaatggaca ttgatgaagt actcggttgg aaagatgaat
     1201 tagatgagca aaaagtggac cccacaaatc tctcaacgat ggacgagaat gtagaggttg
     1261 aagagaaaga aatagatacg ttggaggcta aacagttgta cgaaacagca gtttcgtttc
     1321 accaatcacg ttattttctc gcaccagaaa acgaaggtga attctcggtt tttgatttag
     1381 tttggggtaa aattaggagc tatccgtggt ggccgggtca aatatttgac ccgtctgatg
     1441 catcagaaaa agcaatgaaa catcacaaaa aggattgctt tttagtagca tattttggtg
     1501 accgaacgtg tgcgtggaac gagtcaactg ccttgaaacc ttttcggtca actttttccc
     1561 aaatagcaaa ccgtacaaat tcggaagctt ttaataatgc cgtccactgt gctttacaag
     1621 aagtgtctag acgggttgaa ttagggcttg catgctcatg cattcctcgt gaaatttacg
     1681 agaacattaa atgtcaaatt gtagaaaatg caggaattaa acaagaatcg agtaaaagac
     1741 aaggtataga taaatctgct agtgttaact catttgaacc tgataaactc gttgactatg
     1801 tgagactact tgcgaaattc ccgtacggtg aaagtgataa aatggagctc acaatggcaa
     1861 tagctcaact atcgtcctat ggtcgttata aaaggtattg ccagctggca gagtttcagt
     1921 tatgtggtga catatcggaa gctgatcaag ttatgaacga tgcaacattt attgatgatg
     1981 gttctaaaaa acgaaaggct ctcgattcca tttctgatga accagtagaa acggctaaac
     2041 cctcttttaa agttggtgca tgcagtcaaa aagtagaaag tcaacagact ggaccacttt
     2101 taaagggtaa accggttgac caagtagttt cagatcaagc tcagttgtta tcacaacttt
     2161 acttggctgc tcgggacccg attaaaggac acgacttttt gaataccatc gtcccgtttt
     2221 tcaattccca ccgagcagct attttgaaca agattagaca agattcagtt aatactaaaa
     2281 agagaaaagc atcaaatgaa aatgatctag aagagtttgg atttgatgat tattggacgg
     2341 ataggatcgt tcagaacaat ccaaatgaac aactatcgca agaacatcaa aatggtgaca
     2401 gagtacatca aactgtaaaa ccgacccgca gatcgaataa aaagcgtttt tttagtagca
     2461 attatgaaat agaggccaag gaacaattgg agcttataga aaggagacgg ttgaatttgg
     2521 aaactgaact tttgatgaag tttactgaag gtatttattt cccttcagaa gttcatctga
     2581 ataaaatttt taaacggttc gggcctttaa tggaatcaga aactaaagta gatagacaaa
     2641 atgggcgagc tcgagtggta tttaaaaaat gttcagacgc cgaagttgct cataatagcg
     2701 ctggaaagtt caacatcttt ggctccattt tagtaaactt tgaactgaat tatacaccgt
     2761 tgatctcgta caagccttgt cctcttccac cggctcaaga tacaacagat gcatgctaag
     2821 ttgtatcttt tctgctgttg tattcaaaga gacatgttcg tgaacttgga ctgtaattgt
     2881 gcattaggcg ctaatcgtat ctaaaaatat ctaattttcg aggagagtta tcatgtctat
     2941 gtgttgtttt tggcttgtaa tatggattag tggtaaggat ggtttgaagc ttctggagcc
     3001 acagttagct ttgtaccaat gtaacccctg ttgtctattg tccattttga aagataagta
     3061 agaatgcagg cttatttgtt ttcagttaaa ataggtagcc aaaacttttt ctagattagt
     3121 tcttagcatg agttatattt attactattt cgagtgcaag tctgttacat ttaatgcgat
     3181 cattgttaaa ttgtatcatc tgcaagactg caatagtagc tttgtttgtg ttggcttcta
     3241 gtctaggaaa taaaccttga acataaaaac aatggcacag gtcaaaatag gtaaatacag
     3301 tctgagtatt aaagaccata ttatggaagt aagaatctaa t
//
LOCUS       XM_071829669            2480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 SUMO-protein ligase
            SIZ1-like (LOC139839574), transcript variant X1, mRNA.
ACCESSION   XM_071829669
VERSION     XM_071829669.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2480
                     /gene="LOC139839574"
                     /note="E3 SUMO-protein ligase SIZ1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139839574"
     CDS             360..2282
                     /gene="LOC139839574"
                     /codon_start=1
                     /product="E3 SUMO-protein ligase SIZ1-like"
                     /protein_id="XP_071685770.1"
                     /db_xref="GeneID:139839574"
                     /translation="MGDLVLECKRKMARFRVQELKDVLSQLGLSKTGRKQELMERILA
                     LFSVEEASDTHISLKRFIPKEDVAMIIDETYSKLQIIGANDTVAGGHNVFDRSRITLK
                     EENVDQKIRCLCGSPLKTESMIQCVDPQCHVLQHISCVKIPMKYTEEALPASSQHYCE
                     TCRIDRCDPFWKTLSYPLSPVKLNRGSSITDDGLQPIQTVETSFQITKPIVNMLENAG
                     YGVQAWCILLNDNVPFRMHWPQYPDLKVNGIPVKTIDRPVSKMLGANGRDDGPSISMY
                     LVDGINKVSLCGSDARTFCLGVRLVRQRTFQQVISMIPSEKEGESFNEAVARVCRCIG
                     GGVVAANDDSDSDLEVIADNVTINLRCPMSGRRMNTAARFRRCIHLGCFDLDTFVQIN
                     QRSKKWQCPICLKNYALEDIIIDPYLNRIVKMMQSCDEDVTEIEVKFNGSWRAKIGHP
                     FKDLERWHLSDGSLSVSEALDDSNWEVSGVESANGNANQSEEYITNNNNNNQEVILMS
                     SGSSENMNEDELQSINHHNMMDYKPPYSHKQSSGITNKSCSSSVANPSVIVISDSEDE
                     DCDTVSVTGVSIIGPPNTSFRPLTANHEIPAASPHPNEEAESSQTGNGKQFALPFRFP
                     RQPRTVRKHHGTKVIK"
     misc_feature    393..491
                     /gene="LOC139839574"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; Region: SAP;
                     smart00513"
                     /db_xref="CDD:128789"
     misc_feature    690..845
                     /gene="LOC139839574"
                     /note="PHD finger superfamily; Region: PHD_SF; cl22851"
                     /db_xref="CDD:473978"
     misc_feature    order(690..692,726..737,753..755,828..830)
                     /gene="LOC139839574"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276966"
     misc_feature    1431..1580
                     /gene="LOC139839574"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(1440..1442,1449..1451,1488..1490,1494..1496,
                     1509..1511,1518..1520,1557..1559,1566..1568)
                     /gene="LOC139839574"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438446"
ORIGIN      
        1 taaaataaaa tatacggagt aataaatata taaaataatt aaaaaataag aaaaataaat
       61 aaaagatctt gtttccgcaa aaccctcatt tgacatgcgg ccctttcccg cgagctgccg
      121 tagcgttgcc ctcaccagtc atgttctact atatatatac tacttacgct cactataacg
      181 cattatgatt tttactatac aattctctta aacccttaat aatacgctat ttgcgatccc
      241 taatttaatt tcgccttatt ccaaatcaaa ttttccaatc acaatcaagt tactgttcga
      301 ttgaatcgtt cagttacgtg catttgtatt gtttgtttga aactgaaatc ggcgagagaa
      361 tgggtgattt ggtgcttgaa tgcaagagaa aaatggcacg ttttagagtt caagagctta
      421 aagatgttct cagccagctt ggcctttcaa agaccgggag aaagcaggaa ctgatggagc
      481 ggatactggc attgttttcc gtggaagaag catcagatac acatatttca ctaaaaagat
      541 ttattccgaa ggaagatgtg gcaatgataa tcgatgaaac ttacagcaaa ctacagatta
      601 taggggcaaa tgatacagta gctggtggtc ataatgtgtt tgaccgtagc aggattacac
      661 tgaaagagga gaatgtggat caaaaaattc gttgtctatg tggcagtcca ctgaaaacag
      721 aatcaatgat tcagtgtgta gatccacaat gtcatgtttt gcagcacatt tcatgtgtca
      781 aaatcccaat gaagtacact gaggaagctc ttcctgcatc ttctcaacat tattgtgaaa
      841 cttgtcgaat cgatcgctgt gacccttttt ggaagactct gtcataccct ctatctccag
      901 taaagctcaa tcgtgggtca agtatcacgg atgatggttt acagccaata caaactgtgg
      961 aaacaagctt tcaaattacc aaaccaattg taaatatgct ggagaatgca ggatacggtg
     1021 tacaggcgtg gtgcattctt cttaatgata acgttccatt caggatgcat tggccacaat
     1081 atccagatct aaaagttaat ggcatccctg ttaaaacaat tgatagaccg gtatcgaaga
     1141 tgcttggagc taatggtcgt gatgatggtc catcaatctc aatgtatcta gtggatggaa
     1201 ttaacaaggt ctctttatgt ggttctgatg ctcgaacttt ttgtttgggt gtcaggctag
     1261 tgagacaacg gacctttcaa caggttatca gcatgatccc tagtgaaaag gaaggtgaat
     1321 cttttaatga agctgttgct cgtgtttgtc gttgcattgg tggtggagta gttgctgcta
     1381 atgatgatag tgacagtgat ttggaagtta ttgctgataa tgtcacaatt aatctccgtt
     1441 gccctatgag cgggcgtaga atgaacactg ctgctagatt tagacgatgc attcacctgg
     1501 gatgttttga tctcgatact tttgttcaaa tcaaccaaag atctaaaaag tggcaatgcc
     1561 caatttgtct aaagaattat gcgcttgagg atattattat tgatccctat ttaaatcgta
     1621 ttgtgaagat gatgcaatca tgtgatgaag atgttactga gatcgaagtg aagtttaacg
     1681 gttcatggcg agccaaaatt ggacatccgt ttaaggatct tgaacgatgg catctttcag
     1741 atggatcatt atctgtttca gaagctctgg atgattcaaa ttgggaagtt tctggtgtag
     1801 aaagtgcaaa tggcaacgcg aatcaatcag aagaatatat taccaacaac aacaacaaca
     1861 accaggaagt tatattaatg agtagtggct cttcagaaaa catgaatgaa gatgagttac
     1921 aaagtatcaa tcatcataat atgatggatt ataagccgcc atacagccat aagcagtcat
     1981 ctggaatcac caacaaaagt tgttcctcat cagtggctaa tcctagtgtc attgttataa
     2041 gtgattcgga agatgaggat tgcgataccg tttctgtgac aggcgtctca ataattggac
     2101 cacctaatac tagttttcgc ccgctcactg ctaatcatga aattccagct gcttcacccc
     2161 atcctaacga ggaagctgaa tctagtcaga cgggtaatgg caaacagttt gctctcccat
     2221 tcagattccc tcgtcagccg aggacagtaa ggaagcatca tggaacaaag gttatcaagt
     2281 gactaaattg gtgtctcctg ttcaagtaaa tgcggtgcaa tgtaatttta gtcgagctgc
     2341 agtgtctgga ggatatgata gcatgttata catggattac aatatgtata gatttgcctt
     2401 ttttttttgt gtacatcgaa gatgcccttc ttgaacaaat tttttttatt ttattcttat
     2461 gatcgcgtgg gtggtttggt
//
LOCUS       XR_011756985            2543 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 SUMO-protein ligase
            SIZ1-like (LOC139839574), transcript variant X2, misc_RNA.
ACCESSION   XR_011756985
VERSION     XR_011756985.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2543
                     /gene="LOC139839574"
                     /note="E3 SUMO-protein ligase SIZ1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139839574"
     misc_RNA        1..2543
                     /gene="LOC139839574"
                     /product="E3 SUMO-protein ligase SIZ1-like, transcript
                     variant X2"
                     /db_xref="GeneID:139839574"
ORIGIN      
        1 gtaaaataaa atatacggag taataaatat ataaaataat taaaaaataa gaaaaataaa
       61 taaaagatct tgtttccgca aaaccctcat ttgacatgcg gccctttccc gcgagctgcc
      121 gtagcgttgc cctcaccagt catgttctac tatatatata ctacttacgc tcactataac
      181 gcattatgat ttttactata caattctctt aaacccttaa taatacgcta tttgcgatcc
      241 ctaatttaat ttcgccttat tccaaatcaa attttccaat cacaatcaag ttactgttcg
      301 attgaatcgt tcagttacgt gcatttgtat tgtttgtttg aaactgaaat cggcgagaga
      361 atgggtgatt tggtgcttga atgcaagaga aaaatggcac gttttagagt tcaagagctt
      421 aaagatgttc tcagccagct tggcctttca aagaccggga gaaagcagga actgatggag
      481 cggatactgg cattgttttc cgtggaagaa gcatcagata cacatatttc actaaaaaga
      541 tttattccga aggaagatgt ggcaatgata atcgatgaaa cttacagcaa actacagatt
      601 ataggggcaa atgatacagt agctggtggt cataatgtgt ttgaccgtag caggattaca
      661 ctgaaagagg agaatgtgga tcaaaaaatt cgttgtctat gtggcagtcc actgaaaaca
      721 gaatcaatga ttcagtgtgt agatccacaa tgtcatgttt tgcagcacat ttcatgtgtc
      781 aaaatcccaa tgaagtacac tgaggaagct cttcctgcat cttctcaaca ttattgtgaa
      841 acttgtcgaa tcgatcgctg tgaccctttt tggaagactc tgtcataccc tctatctcca
      901 gtaaagctca atcgtgggtc aagtatcacg gatgatggtt tacagccaat acaaactgtg
      961 gaaacaagct ttcaaattac caaaccaatt gtaaatatgc tggagaatgc aggatacggt
     1021 gtacaggcgt ggtgcattct tcttaatgat aacgttccat tcaggatgca ttggccacaa
     1081 tatccagatc taaaagttaa tggcatccct gttaaaacaa ttgatagacc ggtatcgaag
     1141 atgcttggag ctaatggtcg tgatgatggt ccatcaatct caatgtatct agtggatgga
     1201 attaacaagg tctctttatg tggttctgat gctcgaactt tttgtttggg tgtcaggcta
     1261 gtgagacaac ggacctttca acaggttatc agcatgatcc ctagtgaaaa ggaaggtgaa
     1321 tcttttaatg aagctgttgc tcgtgtttgt cgttgcattg gtggtggagt agttgctgct
     1381 aatgatgata gtgacagtga tttggaagtt attgctgata atgtcacaat taatctccgt
     1441 tgccctatga gcgggcgtag aatgaacact gctgctagat ttagacgatg cattcacctg
     1501 ggatgttttg atctcgatac ttttgttcaa atcaaccaaa gatctaaaaa gtggcaatgc
     1561 ccaatttgtc taaagaatta tgcgcttgag gatattatta ttgatcccta tttaaatcgt
     1621 attgtgaaga tgatgcaatc atgtgatgaa gatgttactg agatcgaagt gaagtttaac
     1681 ggttcatggc gagccaaaat tggacatccg tttaaggatc ttgaacgatg gcatctttca
     1741 gatggatcat tatctgtttc agaagctctg gatgattcaa attgggaagt ttctggtgta
     1801 gaaagtgcaa atggcaacgc gaatcaatca gaagaatata ttaccaacaa caacaacaac
     1861 aaccaggaag ttatattaat gagtagtggc tcttcagaaa acatgaatga agatgagtta
     1921 caaagtatca atcatcataa tatgatggat tataagccgc catacagcca taagcagtca
     1981 tctggaatca ccaacaaaag ttgttcctca tcagtggcta atcctagtgt cattgttata
     2041 agtgattcgg aagatgagga ttgcgatacc gtttctgtga caggcgtctc aataattgga
     2101 ccacctaata ctagttttcg cccgctcact gctaatcatg aaattccagc tgcttcaccc
     2161 catcctaacg aggaagctga atctagtcag acgggtaatg gcaaacagtt tgctctccca
     2221 ttcagattcc ctcgtcagcc gaggacagta aggaagcatc atggaacaaa ggttatcaag
     2281 tgactaaatt gtgatctact atttgtgctc ctttatcatt tcttttaaag cttctatctg
     2341 atgatgtttg aaggtgtctc ctgttcaagt aaatgcggtg caatgtaatt ttagtcgagc
     2401 tgcagtgtct ggaggatatg atagcatgtt atacatggat tacaatatgt atagatttgc
     2461 cttttttttt tgtgtacatc gaagatgccc ttcttgaaca aatttttttt attttattct
     2521 tatgatcgcg tgggtggttt ggt
//
LOCUS       XM_071829670            1349 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tobamovirus multiplication
            protein 3-like (LOC139839575), mRNA.
ACCESSION   XM_071829670
VERSION     XM_071829670.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1349
                     /gene="LOC139839575"
                     /note="tobamovirus multiplication protein 3-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139839575"
     CDS             203..1084
                     /gene="LOC139839575"
                     /codon_start=1
                     /product="tobamovirus multiplication protein 3-like"
                     /protein_id="XP_071685771.1"
                     /db_xref="GeneID:139839575"
                     /translation="MGRVLLGSYKDVTVSYVFKNLYGWWDEFNNNSQISQDLIFHVLA
                     AFYGIVALVALVQLIRIQVRVPEYGWTTQKVFHFLNVLVNGVRCLIFVFHHDVEQFKP
                     EIVQHILLDVPSLAFFTTYALLVLFWAEIYYQARNVSTDGLRPTFLAINGIIYAVQIV
                     LWLVIWWKPIAPLVILAKMFLAGVSLFAALGFLVYGGRLFLMLQRFPVESKGRRKKLQ
                     EVGYVTTICFVCFLIRCIMMCFNAFDEAANLDLMDHPVLNFIYYLLVEILPSSLVLII
                     LRKLPPKRVITTYHPIH"
     misc_feature    269..1075
                     /gene="LOC139839575"
                     /note="THH1/TOM1/TOM3 domain; Region: THH1_TOM1-3_dom;
                     pfam06454"
                     /db_xref="CDD:399452"
ORIGIN      
        1 gtttgccggc ttccataaaa accaaatcat cttctttctt tttcaacaca acaaaaacca
       61 attaattaca tataaactaa aacccatatc attctttctt tgatttcaag gtataacttg
      121 aagaaaaaag aatcgtaatt ggtttctttg tttttctgtt caagaaagat ttcgccggcc
      181 ggtgaaacat cagtcgacgg caatgggtag ggttttactt ggatcgtata aagatgtaac
      241 ggtgtcgtat gtttttaaaa acctttatgg gtggtgggat gaattcaata ataattccca
      301 aatttctcaa gatttgatct ttcatgttct tgccgctttt tatggaattg tcgcccttgt
      361 tgctctggtg caattgatta gaatacaagt aagagtaccc gagtatggtt ggaccaccca
      421 gaaagtattc catttcctca atgtcttggt taacggagtt agatgtttaa tctttgtatt
      481 tcatcacgac gtcgaacagt ttaagccaga gattgtgcaa catatattgc tcgatgttcc
      541 aagtcttgcc tttttcacta cctacgctct tttagttttg ttctgggcag aaatttacta
      601 tcaggcaagg aacgtttcaa ctgatggtct ccggccaacg ttcttggcaa ttaatggaat
      661 catttatgca gttcagatag tcttatggtt ggttatttgg tggaaaccta tcgctccatt
      721 agtgatcctc gccaagatgt ttcttgcagg tgtgtcactg tttgcagctt tgggttttct
      781 agtttacgga ggaaggctgt ttctaatgtt gcaacgtttc ccagtggaat caaaaggccg
      841 gcgaaaaaag ttacaagagg ttggttacgt gacaacaatc tgtttcgtgt gttttctcat
      901 aagatgtatc atgatgtgct ttaatgcatt tgatgaagct gctaacctgg atttaatgga
      961 ccatcctgtt ttgaatttca tatactacct gttggtggag atactgccgt cgtctctagt
     1021 tctcattata ttgagaaaat tgccacctaa gcgagtcatc acaacatatc accctattca
     1081 ctgaaaacaa gatcaatgat gataggcgat aaggaatcaa tcctatgaga acggtacaga
     1141 tgaagaacct ttgttttcta tgcgatgtct aatgcagtct tgtcggaaat ttagtgacag
     1201 caagtagaaa ccagtcaatc ggtgttttcg aagaactttg ggaaatctgg tttgtgaaat
     1261 atgtttgttt ttgtattgta attgttggtg taatttgatg gtggttcata gaaaagtaag
     1321 tggtgttcaa aggtttgatg tttatgaag
//
LOCUS       XM_071829671            1399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839576), mRNA.
ACCESSION   XM_071829671
VERSION     XM_071829671.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1399
                     /gene="LOC139839576"
                     /note="uncharacterized LOC139839576; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839576"
     CDS             235..1176
                     /gene="LOC139839576"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685772.1"
                     /db_xref="GeneID:139839576"
                     /translation="MNRWTGILKVPLFPGSRGHYKVAASLCISTSSPNPIVPSANAIF
                     FNGDRVKGTGNPVIERLSDLETIAEIIVGKLGENVNAWVIEASKFNGPFAVYKDFIPS
                     VNEWGEPLSYDPTGYPSLTSTVSLLSSCLKEVKNTLLSNYEKPYVDEACSSSFSQPKT
                     FLFGFSKGGSVLNQLVTEIAFSEVKSNIVSSQYDIIPTSKENLVNSITEIHYVDVGLN
                     SSGAYITDQDIISRISKRILEGASGIRFVLHGTPRQWRDSMRVWIGKEKDTMVNLIDT
                     ESRKCGDKLSVCERFYFGNKQANMQMHFEVIESMDIS"
     misc_feature    <649..1032
                     /gene="LOC139839576"
                     /note="Region: C2orf69; pfam10561"
                     /db_xref="CDD:463147"
ORIGIN      
        1 aaaaatgatt gttaaactaa aagatttgta gctttagggg tcaaaagtaa ttttgaaaaa
       61 tttagattaa acctcaaata gaatactggc acggacaatt cttcacatat tgtgttattc
      121 gagcccgcat cgacccgact caatccgata tctttctgct gaaactcttc tgattctaag
      181 atccggatcc ggatttgcac aactatcgga gcgttccaaa actgttaatc aatcatgaac
      241 cgttggacag gaatactgaa agttcctttg tttccgggta gtagaggtca ctacaaagta
      301 gcagcatctc tttgtatctc aacttcatca ccaaatccaa ttgtaccttc tgcaaatgca
      361 atatttttca atggtgaccg ggtcaaaggg actgggaatc cagtaattga aagactatcg
      421 gatcttgaaa cgattgctga aattattgtg ggtaaacttg gtgaaaatgt taatgcttgg
      481 gttattgaag cttctaaatt taatggacct tttgctgttt ataaggactt tattccgtcg
      541 gtgaacgaat ggggagaacc gttatcgtat gatccgaccg gatatccgtc tcttacatcc
      601 accgtatcat tgttgtcaag ttgtcttaaa gaggtcaaaa acacactttt gagtaattat
      661 gagaaaccgt atgttgatga agcttgtagt tcaagttttt cgcaacctaa aacatttttg
      721 ttcggattta gtaaaggtgg tagtgtactt aatcagctag taaccgagat tgccttttct
      781 gaagtcaaat caaacattgt ttcgtcccaa tacgatatta taccgacttc taaagaaaac
      841 cttgtaaata gtattaccga aatccattat gtggatgttg gattaaactc aagtggagca
      901 tacattactg atcaagacat aatcagcaga atatctaaac gtattttaga aggagcctcg
      961 ggaatacgtt ttgttcttca tggaacacca agacaatggc gtgatagcat gcgggtttgg
     1021 atcgggaagg aaaaggatac gatggtcaat ttgattgata ctgaatctcg aaaatgtgga
     1081 gacaaattga gtgtatgtga gcggttttat tttggtaaca aacaagctaa tatgcagatg
     1141 cactttgaag taattgaaag catggatatc agttgagtgc cctgatcttg ttgacagggt
     1201 gcatagatcg ctttgctact gaattagatt agttatttaa cttcaatgtt gtagttctat
     1261 agatcgttat atttaataag tatacgtctt ttattttcct tgtataagaa tttggttatt
     1321 ggttgttttc aaaaaccatt ttaactatgc agtctattat tgtgtttaag atgatatatc
     1381 tattatggtg ctttgcaaa
//
LOCUS       XM_071829672            3437 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides plasma membrane ATPase
            1-like (LOC139839578), mRNA.
ACCESSION   XM_071829672
VERSION     XM_071829672.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3437
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3437
                     /gene="LOC139839578"
                     /note="plasma membrane ATPase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839578"
     CDS             114..3239
                     /gene="LOC139839578"
                     /codon_start=1
                     /product="plasma membrane ATPase 1-like"
                     /protein_id="XP_071685773.1"
                     /db_xref="GeneID:139839578"
                     /translation="MGGLCNVCKQVRHFFTTGRRETKSVASCYSSGIPKTKSVPKLTN
                     TCPVCSKVVKMDDMSIALSAVIREAIDLENAPLEEVFQHLKCTREGLNSSEVQERLNL
                     FGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMSIALARGGGKPADYHDFVGIIVL
                     LVINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDATVLVPGDIISIKLGD
                     IVPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEGVVIATGVHT
                     FFGKAAHLVENTTHVGHFQRVLSSIGNFCICSIAIGMIIEIIVIYGIHRREYRIGIDN
                     LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL
                     TLNKLTVDKNMIEVFAKGVDKDMVVLMAARASRLENQDAIDAAIVAMLGDPKEARAGI
                     REVHFLPFNPTDKRTALTYTDKTGKMHRVSKGAPEQILNLAHNKSEIEKRVHSIIDKF
                     AERGLRSLGVARQEVPAGTKERPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVK
                     MITGDQLAIGKETGRRLGMGTNMYPSSALLGDTKDFGALPVDELIEKADGFAGVFPGM
                     YLNFIIKLRIFLKGAKTLVLFAEHKYEIVRRLQARKHICGMTGDGVNDAPALKKADIG
                     IAVADSTDAARSASDIVLTEPGLSVIISAVLTSRSIFQRMKNYTIYAVSITIRIVLGF
                     MLLCVFWKFDFPPFMVLVIAVLNDGTIMTISKDRVKPSPVPDSWKLTEIFATGVVLGA
                     YMALMTVIFFWLAYETNFFPNMFNVKNLNSHRRNMSIKAESKELMAMMASAVYLQVST
                     ISQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVASVISATVTWELAGIRKIGWGWTG
                     VIWLFNILTYMLLDPIKFLVQYVLSGRAWGLVVDKRTAFTTKKDFGREAREAAWATEQ
                     RTLHGLQPAEPKMFSEQGTFREISLMADEARRRAEIARLREIHTLKGKVESFAKLRGL
                     DIDAMNQHYTV"
     misc_feature    381..2804
                     /gene="LOC139839578"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     Region: ATPase-IIIA_H; TIGR01647"
                     /db_xref="CDD:273731"
ORIGIN      
        1 tgtgcaattc caatggatag atagaatttt gttgtggaaa aaaaatatat gcaaggtcgt
       61 gaaggaatcg tattaagtag acacagagaa gcgatggagg ttgcagtgtc aagatgggcg
      121 ggttatgcaa cgtgtgtaaa caggtaagac attttttcac aactggccgc cgagaaacta
      181 aatctgttgc atcatgctac agttctggca tacctaagac caagagtgta cccaagttaa
      241 caaatacatg tccagtatgt tctaaagtcg taaaaatgga tgacatgtca attgctctta
      301 gtgcagtaat ccgagaagct atcgatttgg aaaatgcacc attagaggaa gtatttcaac
      361 atctgaaatg tacaagagaa ggtttaaact caagtgaagt tcaagagcga ttgaatcttt
      421 ttggatacaa caaactcgaa gaaaagaagg aaagtaaaat cttgaagttt ttgggattta
      481 tgtggaatcc gctctcatgg gtgatggaag ctgcagctat tatgtctata gcacttgctc
      541 gtggaggggg caagcctgct gattaccatg actttgtggg gatcattgta ctgctggtta
      601 taaactcaac gatcagtttc attgaggaaa acaatgctgg aaatgcagct gctgctctta
      661 tggctcgttt agctccgaaa gcaaaggttc ttcgtgacgg aaaatggagc gaagaagatg
      721 ctaccgtttt agttcctggc gatattatca gtatcaaact tggagatatc gttcctgctg
      781 atgcccgtct gttagaaggc gatcctctta agatcgatca gtctgcactc accggagaat
      841 cgcttccggt aaccaagaat ccaggagatg gcgtttactc gggttcaact tgtaaacaag
      901 gagaaatcga gggtgttgtg atcgcaaccg gagttcacac tttttttggg aaagcagctc
      961 atcttgttga gaacacaact catgttggac actttcaaag ggtgttatca tcaataggga
     1021 acttctgcat ttgctcaatt gctatcggta tgatcattga gatcattgta atatatggta
     1081 ttcatcggag ggaatatcgt attggaatcg ataaccttct tgtcctactt attggtggta
     1141 taccgatagc tatgcctacc gttctttccg tcactatggc cattggttca catcggttgt
     1201 ctcaacaggg tgcgattaca aaaagaatga ctgcaataga agaaatggct gggatggatg
     1261 tgctatgtag cgacaaaacc ggtacattga cactcaacaa gcttacagtt gacaaaaata
     1321 tgatcgaggt ttttgcgaaa ggcgttgaca aggacatggt cgtcttaatg gctgcacggg
     1381 catcacggct agaaaatcag gatgccattg atgctgctat agttgctatg cttggagacc
     1441 ctaaggaggc tcgggctggg atacgagagg tccatttcct acctttcaat ccaaccgaca
     1501 aaaggacagc acttacgtac acagataaaa ccggtaaaat gcatagagtt agcaaaggtg
     1561 cacccgaaca gatactcaat cttgcacata acaaatcaga aattgagaaa agggtgcatt
     1621 cgataattga caagtttgca gagcgtgggc tgcggtccct tggagttgct cgacaagaag
     1681 tgccagctgg aaccaaagaa agaccgggtg ggccatggga gtttgtaggc cttcttccac
     1741 tctttgaccc tccaagacat gatagtgctg aaactatccg tagagcttta gatcttggcg
     1801 tgagcgttaa gatgattaca ggtgaccaat tggctattgg taaggaaacg ggaagacggt
     1861 taggtatggg aacgaacatg tacccttctt cggctttgct tggcgatact aaggattttg
     1921 gagctttgcc tgtcgacgag cttattgaaa aagccgacgg ttttgctggt gtctttcccg
     1981 gtatgtactt aaatttcata attaaattaa ggatttttct aaaaggtgca aaaacacttg
     2041 tactttttgc agaacacaaa tatgagatag ttaggagact acaagcccga aaacacatat
     2101 gtggaatgac tggtgacggt gtaaacgatg cacccgctct aaagaaagct gatattggga
     2161 ttgcagtggc tgattcaact gatgcagctc gtagcgcgtc tgatatagtt ctaactgaac
     2221 ctggattgag tgtcattata agtgcagtct taactagccg ttcaatcttc caaagaatga
     2281 agaattacac gatatacgca gtttctatta ccatccgaat cgtgctaggt ttcatgttgc
     2341 tatgtgtttt ctggaaattc gatttccctc ctttcatggt tcttgttata gcagtgctta
     2401 acgatggtac aataatgaca atctcaaaag atagggtaaa gccatctcca gttcctgata
     2461 gttggaagct cacagaaatt ttcgcaactg gtgtggttct tggcgcttat atggcactaa
     2521 tgaccgtaat attcttttgg ttagcatacg aaactaactt ttttccgaat atgtttaatg
     2581 tgaagaactt aaattcgcat cgccgtaaca tgtcaatcaa agcagagtca aaagagttaa
     2641 tggcgatgat ggcatcagcg gtgtatcttc aagtaagcac catcagtcag gcattgatct
     2701 tcgtgacccg atctcggggt tggtctttca ccgaaaggcc tggtctattg cttgtaactg
     2761 catttatcat tgctcaactg gttgcttcag tgatatcggc gactgttacg tgggaactag
     2821 ctggaatccg caagattggg tggggatgga ctggggtgat ctggttgttt aacatattga
     2881 cttacatgtt gcttgatcct atcaagtttc ttgttcagta tgtgctaagt ggaagagctt
     2941 ggggcttggt tgtggataaa aggactgcat ttaccacaaa gaaggacttt ggtagggaag
     3001 ctcgagaggc ggcatgggca acagagcagc gtacgttgca cgggctgcaa cctgcagagc
     3061 caaaaatgtt ttctgagcaa ggaacgttta gggagattag tctcatggca gatgaagcta
     3121 gacgaagagc cgagattgca aggctgagag agatccatac actcaaggga aaggttgaat
     3181 catttgctaa gctaagagga ttagatattg atgcaatgaa ccaacactac acagtttaat
     3241 ttgagcccaa tttttttctt ccttttcttt tttttttttt tttttttcct aaaagaaaaa
     3301 acattaagga aactccattt gtggtatttg tagaagtgat atgatgtgtt gttgattttg
     3361 tatttttcct atatggatta cattttacat actattactt tattacttta catcatttgt
     3421 tgcatttttt tttacga
//
LOCUS       XM_071829673             948 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chlorophyll a-b binding
            protein 6, chloroplastic (LOC139839579), mRNA.
ACCESSION   XM_071829673
VERSION     XM_071829673.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..948
                     /gene="LOC139839579"
                     /note="chlorophyll a-b binding protein 6, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 21 Proteins"
                     /db_xref="GeneID:139839579"
     CDS             77..817
                     /gene="LOC139839579"
                     /codon_start=1
                     /product="chlorophyll a-b binding protein 6,
                     chloroplastic"
                     /protein_id="XP_071685774.1"
                     /db_xref="GeneID:139839579"
                     /translation="MASNALMSCGMAAVCRPSMLSSSKSRFATAVPLSGVATNASRVS
                     MAANWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGI
                     LVPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLSIAFVENQRSME
                     KDPEKKKYPGGAFDPLGYSKDPKTFAENKVKEIKNGRLALLAFVGFCVQQSAYPGTGP
                     LENLATHLADPWHNNIGDVVIPKGIFPN"
     misc_feature    77..811
                     /gene="LOC139839579"
                     /note="fucoxanthin-chlorophyll a/c binding protein;
                     Provisional; Region: PLN00089; cl02879"
                     /db_xref="CDD:470693"
     polyA_site      948
                     /gene="LOC139839579"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcacaccaag tattattcat caaccatcat tcttactaat aatcctccat ttccaagttc
       61 aatattttct ttgaaaatgg cttctaatgc attaatgagc tgcggtatgg cggccgtatg
      121 ccgcccttcg atgttgtctt cttctaaatc aagattcgca acggctgtgc cactttcggg
      181 tgtggccact aatgcatctc gggtttccat ggccgctaac tggatgcccg gtgaaccacg
      241 accaccgtac ctagacggat ctgcacccgg ggatttcggg ttcgacccac ttcgtctcgg
      301 tgaggtccca gagaaccttg aaaggttcaa agagtccgag ctcattcact gcagatgggc
      361 tatgcttgca gttcccggga tcttggtacc cgaagcctta ggattgggca attgggtaaa
      421 agcacaagaa tgggctgccc ttcccggagg acaagcaacg tacctaggaa accctgttcc
      481 atggggcacc ctacccacca ttttggcaat cgaattcctc tctattgcct tcgtagagaa
      541 ccaaagaagc atggaaaaag accccgaaaa gaagaaatac ccaggtggcg cttttgaccc
      601 attgggctac tcaaaagacc caaaaacatt cgccgagaac aaagtcaaag agatcaaaaa
      661 cggacgcttg gcgttgttgg catttgtggg attctgtgtg caacaatcgg cttaccctgg
      721 taccggacct ttggagaact tggcaaccca tttggctgac ccatggcaca acaacatcgg
      781 agatgtcgtt attcctaaag gaattttccc aaactaaatt taagccgcct cttgtgtccg
      841 aattcatatg taaaatccat gtcgatcgat ctgtaatgaa atgaacttat attagtgttg
      901 aacttgctat tctgaacttg acagttaatg gaaacttttt gttgtata
//
LOCUS       XM_071829674            1050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides elongation factor
            1-delta-like (LOC139839580), mRNA.
ACCESSION   XM_071829674
VERSION     XM_071829674.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1050
                     /gene="LOC139839580"
                     /note="elongation factor 1-delta-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139839580"
     CDS             141..833
                     /gene="LOC139839580"
                     /codon_start=1
                     /product="elongation factor 1-delta-like"
                     /protein_id="XP_071685775.1"
                     /db_xref="GeneID:139839580"
                     /translation="MAPTFYVGSEAGLKKLDEYLLSRSYITGYQASKDDLTVHAAFTK
                     PPSPQYVNVSRWYNHITALLRISGVFAEGSGVVVDGSAYFPEEAIATPPVAETKGAVD
                     EDDDSDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMQKL
                     EEAVRSVQMEGLHWGASKLVPVGYGIKKLQIMMTIDDDLVSVDSLIEDKLMAEPINEY
                     VQSCDIVAFNKI"
     misc_feature    <165..329
                     /gene="LOC139839580"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; Region: GST_C_family; cl02776"
                     /db_xref="CDD:470672"
     misc_feature    555..830
                     /gene="LOC139839580"
                     /note="Elongation factor 1 beta (EF1B) guanine nucleotide
                     exchange domain. EF1B catalyzes the exchange of GDP bound
                     to the G-protein, EF1A, for GTP, an important step in the
                     elongation cycle of the protein biosynthesis. EF1A binds
                     to and delivers the aminoacyl...; Region: EF1B; cd00292"
                     /db_xref="CDD:238181"
     misc_feature    order(561..563,573..575,585..593,663..668,681..683,
                     690..692,714..716,720..722,729..731,738..740,747..752,
                     807..809,822..827)
                     /gene="LOC139839580"
                     /note="EF1A interaction surface [polypeptide binding];
                     other site"
                     /db_xref="CDD:238181"
     polyA_site      1050
                     /gene="LOC139839580"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caaaatgaca aatttaccct ctatcaccct tctaattata gatagacgat tctagtaggg
       61 tttttgatca ccattgccca atttacctct caactcaact cgcaaactgt aggcataaga
      121 gtttagttaa ttgcatacaa atggctccta cattttatgt tggttctgag gctgggctta
      181 aaaagcttga tgagtaccta ttgtcccgta gttacatcac cgggtatcaa gcttcgaagg
      241 atgacctcac tgttcatgca gctttcacaa aacctccatc accacaatat gtgaatgtat
      301 ctcgttggta taatcatatc accgctcttt taaggatctc tggtgtattc gctgaaggca
      361 gtggcgttgt tgttgacgga tccgcttatt tcccggagga ggctatcgca actccacccg
      421 ttgctgagac aaagggtgca gtagatgagg atgatgacag tgatgtggat ctctttggtg
      481 aggaaaccga ggaggaaaag aaggctgcgg aagaacgtgc tgctgcggtt aaggcatctg
      541 gaaagaagaa agaatctggt aagtcttcgg tcttattgga tgtgaagcct tgggacgatg
      601 aaaccgacat gcaaaagctc gaggaagctg tgagaagtgt tcaaatggag ggcttgcatt
      661 ggggtgcatc caagttggta ccggttggat atggtattaa gaagctgcag atcatgatga
      721 ccattgatga tgacctggtg tctgttgatt cactcattga agataaactt atggcagaac
      781 caattaatga atatgttcag agttgtgata ttgtggcctt caataagatc taatttgtca
      841 acgttgctcc aatgcattgg gatgtgcgaa tgcttcatga tagtgtattg tattagtgtt
      901 gtgcatccgt ttaattcctc tgttagtggt tctatctctc tcaacttttt agcattttga
      961 tcatgtttgt gtgtgtttgt gacttgtgat cttatcctct tacgggttta agtagattat
     1021 cgaatatata tttttatatg ttttttttaa
//
LOCUS       XM_071829676            2558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase At4g27290
            (LOC139839581), transcript variant X1, mRNA.
ACCESSION   XM_071829676
VERSION     XM_071829676.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2558
                     /gene="LOC139839581"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139839581"
     CDS             4..2451
                     /gene="LOC139839581"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X1"
                     /protein_id="XP_071685777.1"
                     /db_xref="GeneID:139839581"
                     /translation="MLFPAFTFLFLTLSTCSAVNTISVNQNITDGDTIISKNQKFELG
                     FFSPGISKNRYLGIWFKNTSPLTVVWVANRKTPLNNTLAKITLSSRGTLSIVNIRGSI
                     IWSSNSLAPRTNANPIAQLLNTGNLVIKIRNSVVWQSFDYPGDTFISGMKLGKNLVTG
                     KEFYLRSWASADDPFPGKYTVRLFKVKGKYPQVYISKGSVIVSRMGPFDGIEFAGHPK
                     SRHDSNNLYQNEMVVNHKEMYYKYRSNSTVLAARTVMTPGGKLEIWQLNMRNQEWMQD
                     LTIPMDYCDNYGLCGPYGSCSTNTLSNCECMKGFEIKDVGYDLNPYNWSNGCRRSREL
                     DCGPGDGFLKFSSMKLPDTQNAVFDGSMSIHECEVACKDNCSCTAYANPNVTRGSVGC
                     LRWFGDLIDVRVYSINGQDLYVKLAASELLGNSIAKFGFNKKFGVLTVVLLTSSAAGL
                     LFAVLSACRTKMKRRHLLGNQYALNKKHATVQIQDLDELPSFSLHEIAKATDNFSINN
                     KIGEGGFGPVYKGVLENEQEVAVKRLSETSQQGLDEFKNEVICIAKLQHRNLVKLLGY
                     CVHENEMILVYEYMPNKSLDTYLFDETRSSMLDWPKRFHIINGMARGILYLHQDSRLQ
                     IVHRDLKAGNILLDNDMNPKITDFGLARNFVGSDTATKTKRVMGTYGYISPEYALHGQ
                     FSTKSDVFSFGVLVLEIISGKKNRGFSHEDHSDSLIGHAWRLYKENRSIELMCPSLRE
                     SCVMSEVLRSIHVGLLCVQHHAQDRPTMFSVVLMLVSEGVLPQPKQPAFFTGEIPSEV
                     QSGSSVNDYTITQVYAR"
     misc_feature    order(88..90,97..99,178..180,208..213,313..315,319..321,
                     349..351,355..357,361..363,367..390,391..432)
                     /gene="LOC139839581"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(154..156,163..165,169..171,175..177,181..183,
                     265..267,271..273,277..279,283..285,289..291,367..369,
                     373..375,379..381,385..387)
                     /gene="LOC139839581"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    202..507
                     /gene="LOC139839581"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    613..942
                     /gene="LOC139839581"
                     /note="S-locus glycoprotein domain; Region:
                     S_locus_glycop; pfam00954"
                     /db_xref="CDD:395761"
     misc_feature    1003..1254
                     /gene="LOC139839581"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; Region:
                     PAN_AP_plant; cd01098"
                     /db_xref="CDD:238531"
     misc_feature    order(1054..1056,1066..1068,1111..1113)
                     /gene="LOC139839581"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     misc_feature    1531..2328
                     /gene="LOC139839581"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1531..1545,1555..1557,1591..1593,1597..1599,
                     1684..1686,1732..1743,1753..1755,1759..1761,1888..1890,
                     1894..1896,1900..1905,1909..1911,1942..1944,1951..1953,
                     2005..2016)
                     /gene="LOC139839581"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1531..1545,1555..1557,1591..1593,1597..1599,
                     1684..1686,1732..1743,1753..1755,1888..1890,1894..1896,
                     1900..1905,1909..1911,1942..1944)
                     /gene="LOC139839581"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1543..1545,1753..1755,1759..1761,1888..1890,
                     1894..1896,1900..1902,1951..1953,2005..2016)
                     /gene="LOC139839581"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1939..1962,1993..2016)
                     /gene="LOC139839581"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 ataatgttat tcccagcctt taccttttta tttctaactc tatcaacatg cagtgcagta
       61 aacaccattt ctgttaatca aaacatcaca gatggtgaca caatcatttc aaagaaccaa
      121 aaatttgagc ttggtttctt tagccccggg atttcaaaaa atcgatactt agggatatgg
      181 tttaagaaca catcacctct tacagtcgta tgggtcgcta acagaaaaac accactaaac
      241 aacacgttgg ccaaaatcac attaagcagc cgcgggacac tgtctatcgt aaacatccgt
      301 ggctcaatca tttggtcatc gaactcattg gcaccaagga caaatgcaaa ccccatagca
      361 caactgttga atacaggaaa cttggtgatc aagattcgaa acagtgtggt ttggcaaagt
      421 tttgattacc ctggggacac gtttatatcg ggtatgaaat tgggtaaaaa tttggtaaca
      481 ggaaaagagt tttatctgag atcatgggcg agcgcggatg acccgtttcc aggtaagtat
      541 acagttaggc tgtttaaggt taagggtaaa tatccacaag tatatatcag taaaggttct
      601 gttattgtat caaggatggg cccgtttgat ggtatcgagt ttgctggaca tccgaaatct
      661 aggcatgact cgaacaactt gtatcaaaat gaaatggttg ttaatcacaa ggagatgtat
      721 tacaaatata gatctaatag taccgtactc gcggcaagaa cagtaatgac gccaggtggc
      781 aaacttgaaa tctggcagct gaatatgcga aaccaagagt ggatgcagga tcttacgata
      841 ccgatggatt attgtgataa ttatggatta tgtggcccat atggaagctg tagtactaat
      901 acattatcta attgtgagtg tatgaaaggg tttgagatta aagatgtggg atacgatttg
      961 aatccgtata attggagtaa tggatgtaga cgaagtagag agttggattg tgggcccgga
     1021 gatggatttt tgaaattttc gagtatgaaa ttgccagata cgcaaaatgc cgtgttcgat
     1081 ggaagtatga gtattcatga atgtgaggtt gcttgtaagg ataactgctc gtgcactgcg
     1141 tatgctaatc cgaacgttac tcgaggttct gttggatgtt tgcgatggtt tggtgatttg
     1201 attgacgtac gagtgtactc aattaacggg caagatcttt atgttaaact ggcggcctca
     1261 gaattattag gaaattcgat cgctaaattt ggcttcaata aaaagtttgg agtactcact
     1321 gtggtcttat taacttcgtc tgctgcgggg cttctgtttg cagtgttgtc tgcttgtaga
     1381 acgaaaatga aaaggcgtca cttattagga aaccaatatg cccttaataa aaagcatgcg
     1441 actgttcaaa ttcaagatct tgatgagctg ccttccttta gcctacatga aatagctaag
     1501 gctacagata acttcagcat caacaataag ataggagaag gtggctttgg tcctgtttat
     1561 aagggtgtgt tagaaaacga acaagaagta gctgtgaagc ggctgtcaga aacatcgcaa
     1621 caagggctcg atgaattcaa aaatgaagta atttgtattg ctaaacttca gcaccgcaat
     1681 cttgtgaagc ttctcggata ctgcgttcat gaaaatgaaa tgattttggt ttatgaatac
     1741 atgcccaaca aaagcttaga cacttactta tttgatgaaa cgagaagctc aatgcttgat
     1801 tggcccaagc gatttcacat tattaacggg atggctcgag gtattctata tctacatcaa
     1861 gattcacgtc ttcaaatcgt acatagagat ctcaaggctg gtaacatttt actggataat
     1921 gatatgaacc ctaaaatcac agacttcggc cttgcaagaa actttgtagg atcggatacc
     1981 gctactaaga caaagagagt catgggaaca tacggttaca tttcaccgga gtatgcatta
     2041 cacgggcaat tttctacaaa gtcggatgtg tttagttttg gcgttttggt tttggagata
     2101 attagtggta agaaaaacag aggattctct catgaagatc atagtgacag ccttattgga
     2161 catgcatgga gactctacaa agaaaacagg tccatcgaac tcatgtgtcc atccttacgc
     2221 gagtcgtgtg ttatgtctga agtattacga tcaatacacg ttgggctatt atgtgtgcaa
     2281 catcatgcac aagatagacc gacgatgttt tcggtggtgc tgatgttggt aagtgaaggt
     2341 gtgttgcctc aacctaaaca acctgctttt tttacaggcg agatccctag cgaagttcag
     2401 tccgggtcgt cagttaatga ttacacgata acacaagtgt atgctcgata gttagcaact
     2461 gtttatgcct gtttactcgt gcataagtgt tttatacctt ttatactgtg aaattttgta
     2521 gttactaaga acagtaagca agagatgttg gaatttta
//
LOCUS       XM_071829677            2565 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase At4g27290
            (LOC139839581), transcript variant X2, mRNA.
ACCESSION   XM_071829677
VERSION     XM_071829677.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2565
                     /gene="LOC139839581"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139839581"
     CDS             4..2391
                     /gene="LOC139839581"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X2"
                     /protein_id="XP_071685778.1"
                     /db_xref="GeneID:139839581"
                     /translation="MLFPAFTFLFLTLSTCSAVNTISVNQNITDGDTIISKNQKFELG
                     FFSPGISKNRYLGIWFKNTSPLTVVWVANRKTPLNNTLAKITLSSRGTLSIVNIRGSI
                     IWSSNSLAPRTNANPIAQLLNTGNLVIKIRNSVVWQSFDYPGDTFISGMKLGKNLVTG
                     KEFYLRSWASADDPFPGKYTVRLFKVKGKYPQVYISKGSVIVSRMGPFDGIEFAGHPK
                     SRHDSNNLYQNEMVVNHKEMYYKYRSNSTVLAARTVMTPGGKLEIWQLNMRNQEWMQD
                     LTIPMDYCDNYGLCGPYGSCSTNTLSNCECMKGFEIKDVGYDLNPYNWSNGCRRSREL
                     DCGPGDGFLKFSSMKLPDTQNAVFDGSMSIHECEVACKDNCSCTAYANPNVTRGSVGC
                     LRWFGDLIDVRVYSINGQDLYVKLAASELLGNSIAKFGFNKKFGVLTVVLLTSSAAGL
                     LFAVLSACRTKMKRRHLLGNQYALNKKHATVQIQDLDELPSFSLHEIAKATDNFSINN
                     KIGEGGFGPVYKGVLENEQEVAVKRLSETSQQGLDEFKNEVICIAKLQHRNLVKLLGY
                     CVHENEMILVYEYMPNKSLDTYLFDETRSSMLDWPKRFHIINGMARGILYLHQDSRLQ
                     IVHRDLKAGNILLDNDMNPKITDFGLARNFVGSDTATKTKRVMGTYGYISPEYALHGQ
                     FSTKSDVFSFGVLVLEIISGKKNRGFSHEDHSDSLIGHAWRLYKENRSIELMCPSLRE
                     SCVMSEVLRSIHVGLLCVQHHAQDRPTMFSVVLMLVSEGTIETISSYNMRIIVTN"
     misc_feature    order(88..90,97..99,178..180,208..213,313..315,319..321,
                     349..351,355..357,361..363,367..390,391..432)
                     /gene="LOC139839581"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(154..156,163..165,169..171,175..177,181..183,
                     265..267,271..273,277..279,283..285,289..291,367..369,
                     373..375,379..381,385..387)
                     /gene="LOC139839581"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    202..507
                     /gene="LOC139839581"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    613..942
                     /gene="LOC139839581"
                     /note="S-locus glycoprotein domain; Region:
                     S_locus_glycop; pfam00954"
                     /db_xref="CDD:395761"
     misc_feature    1003..1254
                     /gene="LOC139839581"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; Region:
                     PAN_AP_plant; cd01098"
                     /db_xref="CDD:238531"
     misc_feature    order(1054..1056,1066..1068,1111..1113)
                     /gene="LOC139839581"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     misc_feature    1531..2328
                     /gene="LOC139839581"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1531..1545,1555..1557,1591..1593,1597..1599,
                     1684..1686,1732..1743,1753..1755,1759..1761,1888..1890,
                     1894..1896,1900..1905,1909..1911,1942..1944,1951..1953,
                     2005..2016)
                     /gene="LOC139839581"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1531..1545,1555..1557,1591..1593,1597..1599,
                     1684..1686,1732..1743,1753..1755,1888..1890,1894..1896,
                     1900..1905,1909..1911,1942..1944)
                     /gene="LOC139839581"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1543..1545,1753..1755,1759..1761,1888..1890,
                     1894..1896,1900..1902,1951..1953,2005..2016)
                     /gene="LOC139839581"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1939..1962,1993..2016)
                     /gene="LOC139839581"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 ataatgttat tcccagcctt taccttttta tttctaactc tatcaacatg cagtgcagta
       61 aacaccattt ctgttaatca aaacatcaca gatggtgaca caatcatttc aaagaaccaa
      121 aaatttgagc ttggtttctt tagccccggg atttcaaaaa atcgatactt agggatatgg
      181 tttaagaaca catcacctct tacagtcgta tgggtcgcta acagaaaaac accactaaac
      241 aacacgttgg ccaaaatcac attaagcagc cgcgggacac tgtctatcgt aaacatccgt
      301 ggctcaatca tttggtcatc gaactcattg gcaccaagga caaatgcaaa ccccatagca
      361 caactgttga atacaggaaa cttggtgatc aagattcgaa acagtgtggt ttggcaaagt
      421 tttgattacc ctggggacac gtttatatcg ggtatgaaat tgggtaaaaa tttggtaaca
      481 ggaaaagagt tttatctgag atcatgggcg agcgcggatg acccgtttcc aggtaagtat
      541 acagttaggc tgtttaaggt taagggtaaa tatccacaag tatatatcag taaaggttct
      601 gttattgtat caaggatggg cccgtttgat ggtatcgagt ttgctggaca tccgaaatct
      661 aggcatgact cgaacaactt gtatcaaaat gaaatggttg ttaatcacaa ggagatgtat
      721 tacaaatata gatctaatag taccgtactc gcggcaagaa cagtaatgac gccaggtggc
      781 aaacttgaaa tctggcagct gaatatgcga aaccaagagt ggatgcagga tcttacgata
      841 ccgatggatt attgtgataa ttatggatta tgtggcccat atggaagctg tagtactaat
      901 acattatcta attgtgagtg tatgaaaggg tttgagatta aagatgtggg atacgatttg
      961 aatccgtata attggagtaa tggatgtaga cgaagtagag agttggattg tgggcccgga
     1021 gatggatttt tgaaattttc gagtatgaaa ttgccagata cgcaaaatgc cgtgttcgat
     1081 ggaagtatga gtattcatga atgtgaggtt gcttgtaagg ataactgctc gtgcactgcg
     1141 tatgctaatc cgaacgttac tcgaggttct gttggatgtt tgcgatggtt tggtgatttg
     1201 attgacgtac gagtgtactc aattaacggg caagatcttt atgttaaact ggcggcctca
     1261 gaattattag gaaattcgat cgctaaattt ggcttcaata aaaagtttgg agtactcact
     1321 gtggtcttat taacttcgtc tgctgcgggg cttctgtttg cagtgttgtc tgcttgtaga
     1381 acgaaaatga aaaggcgtca cttattagga aaccaatatg cccttaataa aaagcatgcg
     1441 actgttcaaa ttcaagatct tgatgagctg ccttccttta gcctacatga aatagctaag
     1501 gctacagata acttcagcat caacaataag ataggagaag gtggctttgg tcctgtttat
     1561 aagggtgtgt tagaaaacga acaagaagta gctgtgaagc ggctgtcaga aacatcgcaa
     1621 caagggctcg atgaattcaa aaatgaagta atttgtattg ctaaacttca gcaccgcaat
     1681 cttgtgaagc ttctcggata ctgcgttcat gaaaatgaaa tgattttggt ttatgaatac
     1741 atgcccaaca aaagcttaga cacttactta tttgatgaaa cgagaagctc aatgcttgat
     1801 tggcccaagc gatttcacat tattaacggg atggctcgag gtattctata tctacatcaa
     1861 gattcacgtc ttcaaatcgt acatagagat ctcaaggctg gtaacatttt actggataat
     1921 gatatgaacc ctaaaatcac agacttcggc cttgcaagaa actttgtagg atcggatacc
     1981 gctactaaga caaagagagt catgggaaca tacggttaca tttcaccgga gtatgcatta
     2041 cacgggcaat tttctacaaa gtcggatgtg tttagttttg gcgttttggt tttggagata
     2101 attagtggta agaaaaacag aggattctct catgaagatc atagtgacag ccttattgga
     2161 catgcatgga gactctacaa agaaaacagg tccatcgaac tcatgtgtcc atccttacgc
     2221 gagtcgtgtg ttatgtctga agtattacga tcaatacacg ttgggctatt atgtgtgcaa
     2281 catcatgcac aagatagacc gacgatgttt tcggtggtgc tgatgttggt aagtgaaggg
     2341 acaattgaga caatatcgtc ctacaatatg cggattattg ttactaactg atagaaacaa
     2401 catggttctc ggatcaatat attcctaaaa cttgtaaacg gaacacaagt cttcatcgat
     2461 agtaatccgc taatagttga gatgaagatg ttaacaaaaa ataagtgaaa tgcagagtgg
     2521 aaggcaaaca atatgaaatg aagctacctc attggatgta ggcga
//
LOCUS       XM_071829678            2456 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase At4g27290
            (LOC139839581), transcript variant X3, mRNA.
ACCESSION   XM_071829678
VERSION     XM_071829678.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2456
                     /gene="LOC139839581"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839581"
     CDS             4..2349
                     /gene="LOC139839581"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X3"
                     /protein_id="XP_071685779.1"
                     /db_xref="GeneID:139839581"
                     /translation="MLFPAFTFLFLTLSTCSAVNTISVNQNITDGDTIISKNQKFELG
                     FFSPGISKNRYLGIWFKNTSPLTVVWVANRKTPLNNTLAKITLSSRGTLSIVNIRGSI
                     IWSSNSLAPRTNANPIAQLLNTGNLVIKIRNSVVWQSFDYPGDTFISGMKLGKNLVTG
                     KEFYLRSWASADDPFPGKYTVRLFKVKGKYPQVYISKGSVIVSRMGPFDGIEFAGHPK
                     SRHDSNNLYQNEMVVNHKEMYYKYRSNSTVLAARTVMTPGGKLEIWQLNMRNQEWMQD
                     LTIPMDYCDNYGLCGPYGSCSTNTLSNCECMKGFEIKDVGYDLNPYNWSNGCRRSREL
                     DCGPGDGFLKFSSMKLPDTQNAVFDGSMSIHECEVACKDNCSCTAYANPNVTRGSVGC
                     LRWFGDLIDVRVYSINGQDLYVKLAASELLGNSIAKFGFNKKFGVLTVVLLTSSAAGL
                     LFAVLSACRTKMKRRHLLGNQYALNKKHATVQIQDLDELPSFSLHEIAKATDNFSINN
                     KIGEGGFGPVYKGVLENEQEVAVKRLSETSQQGLDEFKNEVICIAKLQHRNLVKLLGY
                     CVHENEMILVYEYMPNKSLDTYLFDETRSSMLDWPKRFHIINGMARDFGLARNFVGSD
                     TATKTKRVMGTYGYISPEYALHGQFSTKSDVFSFGVLVLEIISGKKNRGFSHEDHSDS
                     LIGHAWRLYKENRSIELMCPSLRESCVMSEVLRSIHVGLLCVQHHAQDRPTMFSVVLM
                     LVSEGVLPQPKQPAFFTGEIPSEVQSGSSVNDYTITQVYAR"
     misc_feature    order(88..90,97..99,178..180,208..213,313..315,319..321,
                     349..351,355..357,361..363,367..390,391..432)
                     /gene="LOC139839581"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    order(154..156,163..165,169..171,175..177,181..183,
                     265..267,271..273,277..279,283..285,289..291,367..369,
                     373..375,379..381,385..387)
                     /gene="LOC139839581"
                     /note="mannose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:237995"
     misc_feature    202..507
                     /gene="LOC139839581"
                     /note="D-mannose binding lectin; Region: B_lectin;
                     pfam01453"
                     /db_xref="CDD:460217"
     misc_feature    613..942
                     /gene="LOC139839581"
                     /note="S-locus glycoprotein domain; Region:
                     S_locus_glycop; pfam00954"
                     /db_xref="CDD:395761"
     misc_feature    1003..1254
                     /gene="LOC139839581"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; Region:
                     PAN_AP_plant; cd01098"
                     /db_xref="CDD:238531"
     misc_feature    order(1054..1056,1066..1068,1111..1113)
                     /gene="LOC139839581"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     misc_feature    1531..2226
                     /gene="LOC139839581"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2230..2346
                     /gene="LOC139839581"
                     /note="Domain of unknown function (DUF3403); Region:
                     DUF3403; pfam11883"
                     /db_xref="CDD:463385"
ORIGIN      
        1 ataatgttat tcccagcctt taccttttta tttctaactc tatcaacatg cagtgcagta
       61 aacaccattt ctgttaatca aaacatcaca gatggtgaca caatcatttc aaagaaccaa
      121 aaatttgagc ttggtttctt tagccccggg atttcaaaaa atcgatactt agggatatgg
      181 tttaagaaca catcacctct tacagtcgta tgggtcgcta acagaaaaac accactaaac
      241 aacacgttgg ccaaaatcac attaagcagc cgcgggacac tgtctatcgt aaacatccgt
      301 ggctcaatca tttggtcatc gaactcattg gcaccaagga caaatgcaaa ccccatagca
      361 caactgttga atacaggaaa cttggtgatc aagattcgaa acagtgtggt ttggcaaagt
      421 tttgattacc ctggggacac gtttatatcg ggtatgaaat tgggtaaaaa tttggtaaca
      481 ggaaaagagt tttatctgag atcatgggcg agcgcggatg acccgtttcc aggtaagtat
      541 acagttaggc tgtttaaggt taagggtaaa tatccacaag tatatatcag taaaggttct
      601 gttattgtat caaggatggg cccgtttgat ggtatcgagt ttgctggaca tccgaaatct
      661 aggcatgact cgaacaactt gtatcaaaat gaaatggttg ttaatcacaa ggagatgtat
      721 tacaaatata gatctaatag taccgtactc gcggcaagaa cagtaatgac gccaggtggc
      781 aaacttgaaa tctggcagct gaatatgcga aaccaagagt ggatgcagga tcttacgata
      841 ccgatggatt attgtgataa ttatggatta tgtggcccat atggaagctg tagtactaat
      901 acattatcta attgtgagtg tatgaaaggg tttgagatta aagatgtggg atacgatttg
      961 aatccgtata attggagtaa tggatgtaga cgaagtagag agttggattg tgggcccgga
     1021 gatggatttt tgaaattttc gagtatgaaa ttgccagata cgcaaaatgc cgtgttcgat
     1081 ggaagtatga gtattcatga atgtgaggtt gcttgtaagg ataactgctc gtgcactgcg
     1141 tatgctaatc cgaacgttac tcgaggttct gttggatgtt tgcgatggtt tggtgatttg
     1201 attgacgtac gagtgtactc aattaacggg caagatcttt atgttaaact ggcggcctca
     1261 gaattattag gaaattcgat cgctaaattt ggcttcaata aaaagtttgg agtactcact
     1321 gtggtcttat taacttcgtc tgctgcgggg cttctgtttg cagtgttgtc tgcttgtaga
     1381 acgaaaatga aaaggcgtca cttattagga aaccaatatg cccttaataa aaagcatgcg
     1441 actgttcaaa ttcaagatct tgatgagctg ccttccttta gcctacatga aatagctaag
     1501 gctacagata acttcagcat caacaataag ataggagaag gtggctttgg tcctgtttat
     1561 aagggtgtgt tagaaaacga acaagaagta gctgtgaagc ggctgtcaga aacatcgcaa
     1621 caagggctcg atgaattcaa aaatgaagta atttgtattg ctaaacttca gcaccgcaat
     1681 cttgtgaagc ttctcggata ctgcgttcat gaaaatgaaa tgattttggt ttatgaatac
     1741 atgcccaaca aaagcttaga cacttactta tttgatgaaa cgagaagctc aatgcttgat
     1801 tggcccaagc gatttcacat tattaacggg atggctcgag acttcggcct tgcaagaaac
     1861 tttgtaggat cggataccgc tactaagaca aagagagtca tgggaacata cggttacatt
     1921 tcaccggagt atgcattaca cgggcaattt tctacaaagt cggatgtgtt tagttttggc
     1981 gttttggttt tggagataat tagtggtaag aaaaacagag gattctctca tgaagatcat
     2041 agtgacagcc ttattggaca tgcatggaga ctctacaaag aaaacaggtc catcgaactc
     2101 atgtgtccat ccttacgcga gtcgtgtgtt atgtctgaag tattacgatc aatacacgtt
     2161 gggctattat gtgtgcaaca tcatgcacaa gatagaccga cgatgttttc ggtggtgctg
     2221 atgttggtaa gtgaaggtgt gttgcctcaa cctaaacaac ctgctttttt tacaggcgag
     2281 atccctagcg aagttcagtc cgggtcgtca gttaatgatt acacgataac acaagtgtat
     2341 gctcgatagt tagcaactgt ttatgcctgt ttactcgtgc ataagtgttt tatacctttt
     2401 atactgtgaa attttgtagt tactaagaac agtaagcaag agatgttgga atttta
//
LOCUS       XM_071829679             976 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839582), transcript variant X1, mRNA.
ACCESSION   XM_071829679
VERSION     XM_071829679.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..976
                     /gene="LOC139839582"
                     /note="uncharacterized LOC139839582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839582"
     CDS             94..774
                     /gene="LOC139839582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685780.1"
                     /db_xref="GeneID:139839582"
                     /translation="METKETKLISKTKGGKVAQMFSQFMERVAKFEEINDAGNRYLVS
                     FRQGLEFIRRPPIENTSELFKKVVKTNNTHRMQSYIEAGYVHTSNRCENLNKLNTSHI
                     QLLGNVSKAKNIIVELENLVEDVKLALEAAIETEYISNLDPISPTSNEDDIVSIVPEK
                     PKDVDYATMVAVVYSMVKQDYVMQEKIVTSLNLNTSSGELESYCLMWSLRPFINDEIM
                     HQAWKLIS"
ORIGIN      
        1 ggaacaccaa ttccttaaac atcattaaca actcatcgga aaatcgttct ctcttttacc
       61 gctaaattat cttcttcagc tgcagagtta agaatggaaa ccaaagaaac taagttgatc
      121 tctaaaacaa aaggtgggaa agttgcccag atgttttcgc aatttatgga aagggttgca
      181 aaatttgaag agataaatga tgcagggaat agatatcttg ttagctttcg tcaagggctt
      241 gagttcatca gaagaccccc tattgaaaat acatcggaac tctttaagaa ggtcgttaaa
      301 actaataaca ctcataggat gcagtcttac attgaagctg gatatgtaca cacttctaat
      361 aggtgtgaaa acctcaacaa gttgaatacg agccatattc aactgttggg taatgtaagt
      421 aaagcaaaaa atattatcgt tgaacttgaa aaccttgttg aggatgttaa gctggcatta
      481 gaagctgcaa ttgaaacgga atatatttct aatttggatc ctatatcgcc tacatccaat
      541 gaggacgata ttgtctcaat tgtccctgag aaaccaaaag atgttgatta tgccacgatg
      601 gtagctgtag tatatagcat ggtgaaacaa gattatgtta tgcaggaaaa gatagttact
      661 tcacttaatc taaatacatc atcaggagaa ctagagagtt actgcttgat gtggtcgctg
      721 cgccctttta taaacgatga aatcatgcat caagcctgga aactaatttc ataaattttt
      781 gttgtattca aaagaaaaaa gttcaagttt ttgtattact tggcagtaaa tacaaagtgg
      841 gtattaaagc tgtaatatga atctataatt tatgggttgt gaaattaggt ctgttcaaag
      901 atatggaggt ttcggtttgt ttgctgcttc aactccaagt ctccaattta gatatgtata
      961 actttttggc ccaaac
//
LOCUS       XM_071829680             922 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839582), transcript variant X2, mRNA.
ACCESSION   XM_071829680
VERSION     XM_071829680.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..922
                     /gene="LOC139839582"
                     /note="uncharacterized LOC139839582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839582"
     CDS             160..720
                     /gene="LOC139839582"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685781.1"
                     /db_xref="GeneID:139839582"
                     /translation="MMQGIDILLAFVKGLSSSEDPLLKIHRNSLRRSLKLITLIGCSL
                     TLKLDMYTLLIEVNTSHIQLLGNVSKAKNIIVELENLVEDVKLALEAAIETEYISNLD
                     PISPTSNEDDIVSIVPEKPKDVDYATMVAVVYSMVKQDYVMQEKIVTSLNLNTSSGEL
                     ESYCLMWSLRPFINDEIMHQAWKLIS"
ORIGIN      
        1 ggaaaatcgt tctctctttt accgctaaat tatcttcttc agctgcagag ttaagaatgg
       61 aaaccaaaga aactaagttg atctctaaaa caaaaggtgg gaaagttgcc cagatgtttt
      121 cgcaatttat ggaaagggtt gcaaaatttg aagagataaa tgatgcaggg aatagatatc
      181 ttgttagctt tcgtcaaggg cttgagttca tcagaagacc ccctattgaa aatacatcgg
      241 aactctttaa gaaggtcgtt aaaactaata acactcatag gatgcagtct tacattgaag
      301 ctggatatgt acacacttct aatagaagtg aatacgagcc atattcaact gttgggtaat
      361 gtaagtaaag caaaaaatat tatcgttgaa cttgaaaacc ttgttgagga tgttaagctg
      421 gcattagaag ctgcaattga aacggaatat atttctaatt tggatcctat atcgcctaca
      481 tccaatgagg acgatattgt ctcaattgtc cctgagaaac caaaagatgt tgattatgcc
      541 acgatggtag ctgtagtata tagcatggtg aaacaagatt atgttatgca ggaaaagata
      601 gttacttcac ttaatctaaa tacatcatca ggagaactag agagttactg cttgatgtgg
      661 tcgctgcgcc cttttataaa cgatgaaatc atgcatcaag cctggaaact aatttcataa
      721 atttttgttg tattcaaaag aaaaaagttc aagtttttgt attacttggc agtaaataca
      781 aagtgggtat taaagctgta atatgaatct ataatttatg ggttgtgaaa ttaggtctgt
      841 tcaaagatat ggaggtttcg gtttgtttgc tgcttcaact ccaagtctcc aatttagata
      901 tgtataactt tttggcccaa ac
//
LOCUS       XM_071829681            1707 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839583), mRNA.
ACCESSION   XM_071829681
VERSION     XM_071829681.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1707
                     /gene="LOC139839583"
                     /note="uncharacterized LOC139839583; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839583"
     CDS             1..1596
                     /gene="LOC139839583"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685782.1"
                     /db_xref="GeneID:139839583"
                     /translation="MAQTFLYFPVFLLLVICSANASHHDWPNHGDDLRNRRYAYGETK
                     ISPATVGNLKLKWKFVAGKDISATPAIYNTTIYVPSWNGKIYALDTLDGSVIWQKDIG
                     ELTGFNSASTVGVVVGVNWTVSRSTPTVADDILIIGLYGPAYVVGVKRSNGELVWSTQ
                     LDAHNYSLITMSGTYYKSAFYVGTSSLEESLSIESCCTFRGSFSKLNAKNGNIIWKTY
                     MLPNNYGSKDEYAGAALWGSSPSIDKHRKTVYIATGNLYSAPLNVTRCQEAQNNQTTP
                     NGEDKCIEPENHSNSILELDLYSGEIKWYKQLGGYDVWFFACNNLSTSGCPPGPNPDA
                     DFGEAPMILTVNSHGNKHDIVVAVQKSGFAWALDRDNGSIVWSKEAGPGGPGGGGTWG
                     SATHGETVYTNIANSGRRNFTLKPSNTTTTSGGWVSMDGRNGNILWSTANPSNATASG
                     PVSLANGVLFAGSTNGSGPIYAMDAATGKILWSYKTGASVYGGMSISNGCIYVGSGYK
                     VSVGLYNPAYTPGTTLFAFCILP"
     misc_feature    73..1581
                     /gene="LOC139839583"
                     /note="Glucose dehydrogenase, PQQ-dependent [Carbohydrate
                     transport and metabolism]; Region: Gcd; COG4993"
                     /db_xref="CDD:444017"
ORIGIN      
        1 atggcacaaa cttttctcta cttccctgtc ttccttttgt tggttatatg ctcagctaat
       61 gcaagtcatc atgattggcc aaaccatggt gacgatttaa gaaaccgtag atacgcatat
      121 ggtgaaacaa agattagccc tgcaactgtg ggtaatctta agctaaagtg gaaatttgtt
      181 gctgggaaag atataagtgc aacaccagca atatacaaca ccaccatata tgttcctagt
      241 tggaatggga aaatatatgc actagatacg ttagacgggt cagttatctg gcaaaaagat
      301 attggcgagt taacaggatt taactcggct tcaacagtag gggtcgtagt aggagtgaat
      361 tggaccgttt ccaggtcaac tcctactgtt gctgatgaca ttttgatcat tggattatat
      421 ggaccggctt acgttgtagg agttaaacgt agcaatggcg agctcgtttg gtctacgcag
      481 ctcgatgcac ataattattc tcttatcact atgtctggaa cttattataa aagcgctttc
      541 tatgtgggaa cttcatcgct agaagaaagt ttaagcattg aatcatgttg tacatttaga
      601 ggaagtttct ctaaattaaa tgccaaaaat ggcaacatca tatggaaaac ctacatgttg
      661 ccaaacaact acggtagcaa ggacgaatat gccggcgccg ccttatgggg cagcagtccg
      721 tccatcgaca aacaccgcaa aacagtctac attgccaccg gtaacttata ctcagcccca
      781 ctaaatgtca cacgatgcca agaagcacaa aacaatcaaa caacacctaa tggagaagat
      841 aagtgtatag agcccgaaaa ccattcaaat tcaatcctag agctcgattt gtattccggg
      901 gaaattaaat ggtataaaca gttaggaggt tacgatgtat ggttttttgc ttgtaataat
      961 ctttcaactt cagggtgtcc gcctgggcct aatccagacg cagattttgg agaagcacca
     1021 atgatattaa ccgttaatag tcatggaaac aagcatgata ttgtggttgc tgtacaaaaa
     1081 agtgggtttg cgtgggcttt ggatcgtgac aacggtagta tcgtatggtc taaggaagcg
     1141 ggacctgggg ggcccggtgg aggaggtaca tggggatctg caacccatgg agagacagtt
     1201 tacaccaaca ttgcaaatag tggacgaaga aactttacgt taaagccatc aaatactaca
     1261 acgactagcg gtggatgggt gtcaatggat ggcaggaatg gcaatatatt atggtcaacc
     1321 gcaaatccaa gtaatgcgac tgcaagtggc cctgtgagtt tagcaaatgg cgttttgttt
     1381 gctggatcaa ctaatgggag tggacctatt tatgctatgg atgctgcaac cgggaaaatt
     1441 ttgtggtcct acaaaaccgg agccagtgtg tatggtggca tgtccataag caatggttgc
     1501 atttatgttg gaagtggtta caaagtaagt gtaggactct ataatcctgc ttacactcct
     1561 ggaacaacac tatttgcctt ctgcattctt ccatagcaag aactgattgt ataaaaagaa
     1621 aaagattaaa tacagaaatg gatatgatta tgtattgttt aacaatagca tgacaataaa
     1681 aataaaaaga ttagatgcct ttttccc
//
LOCUS       XR_011756986             794 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839584), ncRNA.
ACCESSION   XR_011756986
VERSION     XR_011756986.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..794
                     /gene="LOC139839584"
                     /note="uncharacterized LOC139839584; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839584"
     ncRNA           1..794
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839584"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839584"
ORIGIN      
        1 ctaatctgct aaaaccgctc cgattacaat gaatgatacg attttcggta aaactgaacg
       61 atccttgatt ataaacaaac aaccattgat ttccatttgt cggttacgag tctgctgata
      121 cgaagatgcc agaatgccac aatcgatcct tgatttcaaa tcaattgtaa gcagattgaa
      181 taaaggtatc aagtatgtca atttgaaaga cacctggttc aagtcgcgga cgatgattga
      241 tttgtctata tctgatcatg tgtgcgtcca tatataatca tccaaagttc cagagcaggc
      301 tcttggctaa gtgcttggta ttacaatgtg aggtatgcat tcacatgatc actgaatgat
      361 ctagaatgaa tatataaatg ttgcaactct gacaagtttc gattcgagtg gagacttaat
      421 gatctcctac acgacatttc gatcaaccct catattaaga agcttaagct ggtgtgctga
      481 tttttttctg agatacttaa agcgaagtcg caacaacaaa catgagttca gctgggtttt
      541 acttgagaat gaccaaagat gagcatttat tctcttctcc taaatttatg atcatgttat
      601 ttacatcatt attatattga agatgatgat tctttgatac aaaaatatat tgtagtaact
      661 ttcattgaat gcttgagaga atttgaaata cgagcatacg ttgtagatgt agtccccagt
      721 gtgttattca tcgtgacatt ggtaacatgt gaaaactggc ccgcaatctt tagctatatt
      781 caatgtatag taaa
//
LOCUS       XR_011756987             234 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839585), ncRNA.
ACCESSION   XR_011756987
VERSION     XR_011756987.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..234
                     /gene="LOC139839585"
                     /note="uncharacterized LOC139839585; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839585"
     ncRNA           1..234
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839585"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839585"
ORIGIN      
        1 attaggatga ggaattaggg ttttaatctt ttgattttgc tccgctttct tcgacttcac
       61 attatggctg aaaggttggt tgtatttgtt gctgtgcgta tcagttcttc atggagctaa
      121 tgaaagttcc aagttcagaa gctaaactaa gagtattctc ttctaaatta cagtttagta
      181 cacaggttac atatcttagg aaaaatctta atgatgtgca tttgttatta gaac
//
LOCUS       XM_071829682            6256 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone-lysine
            N-methyltransferase ATXR7 (LOC139839586), transcript variant X1,
            mRNA.
ACCESSION   XM_071829682
VERSION     XM_071829682.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6256
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6256
                     /gene="LOC139839586"
                     /note="histone-lysine N-methyltransferase ATXR7; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839586"
     CDS             148..3342
                     /gene="LOC139839586"
                     /codon_start=1
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X1"
                     /protein_id="XP_071685783.1"
                     /db_xref="GeneID:139839586"
                     /translation="MQPEIDVNRQSNVGNNGDINKSYVAYDQPAYVSGWMYLNEQGQY
                     CGPYIQQQLYDGLSTNFLPEELPVYPVLQGSLLNPVPLKYFQKYPDHVATGFVYINAS
                     ASSYKENSHENIDATKEGPRKDAVSTSTSAQKIQNSEAALSLPSTSGKESCWLFEDDL
                     GKKHGPHTLMELYSWLHYGYLKGSVMVYHSDDKVKPTNLQSVIDSFVTGGRESDSAAH
                     PNYVEDESSTDFIHDISDEVCSQLHSGIMKATRKVVLDEIVSHVIMECVTAKKADRHL
                     NHEESKQTVKTRSLDALMVGPTNQQLDECSGSEAAASRSVHTQTTSSNSVEYHECNKF
                     VGTVDNFCGVYIDVCRKLFDSSMQIIWNAVLYDSVADQLSVWRKEKLWATGDVVVEQP
                     VEDFGQESSSSKNDYPPGFEVPSSLSPREVDSKGDCDKDDDLEHTIEGVKNDIHLSVR
                     TSLQKYIETLIDKQVRKVVKTKRKAQMKMVTVDSPVHRSHTNRSDVSTSLAKSSQQNM
                     LVSRRPSFSWFADAFKNVYGHDNIVKYKYLKESSRTVVRQACEFRPSVAMASLPKIGI
                     YVILAACRQKLHDIVVEEFLSISVKDAIDKPNESLRSSKKQSNLDTTVVGSTKTKKKK
                     AVKFINAFDRYKEQSRNGQSLGPVEPSVGKEDCTYSRTRKIKKRKFASLSGQFSADRL
                     VQTSKIHDLSPLVTEQEVAEALLKYGDEVAVNYRANKQLHDSIFNEVQIASASTCQKS
                     VKISTPSQDNDRTVGGVKSRKDNDPDFIPSSLEVSAGNPYQTGGKSSKVGKLKKKSYT
                     DDNDIQQPCSVKVPKLAIGGVKKAQKTQKSKSTKSKTCPVSKGCARCSINGWQWRKWS
                     LHASPAERTRVRGTSVTIANYTGPEANASHLSSAKGLSARTNRVKMRSLLAAADGSDL
                     LKTTQLKARKKRLRFQQSKIHDWGLVALEPIEAEDFVIEYVGELIRSRISDIREQHYE
                     KMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKIISVDGQKKIFIYAKRH
                     IVSGEEITYNYKFPLEEKKIPCNCGSKRCRGSMN"
     misc_feature    607..726
                     /gene="LOC139839586"
                     /note="GYF domain; Region: GYF; pfam02213"
                     /db_xref="CDD:460496"
     misc_feature    2884..3327
                     /gene="LOC139839586"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     Region: SET_SETD1; cd19169"
                     /db_xref="CDD:380946"
     misc_feature    order(2947..2958,3007..3009,3085..3102,3142..3159,
                     3181..3189,3214..3216,3262..3279,3283..3294)
                     /gene="LOC139839586"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     misc_feature    order(2947..2958,3085..3087,3145..3159,3268..3270,
                     3283..3294)
                     /gene="LOC139839586"
                     /note="putative SAM binding site; other site"
                     /db_xref="CDD:380946"
     misc_feature    order(3163..3165,3286..3288,3292..3294,3307..3309)
                     /gene="LOC139839586"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:380946"
ORIGIN      
        1 ttccgttcac cgattaatta tcttatcatc tccatcctaa tcctaatcct aatcctaatc
       61 ctaatatttc gatctatatt ttagttttaa tcctttgaaa accatcgatc gatctatata
      121 ttatcagttt acctaaaaga aggtgatatg cagcctgaaa ttgacgtaaa tcgacagtca
      181 aatgttggca ataacggtga tataaacaaa agctatgttg catatgacca gcctgcatat
      241 gtgtctggat ggatgtattt gaatgaacaa ggacaatatt gtggcccata tatacaacag
      301 caactgtatg atgggctatc cactaatttc ttaccagagg aactccctgt ataccctgtt
      361 ttgcaaggaa gtttgttgaa tcctgtgccc ttaaagtact ttcaaaagta tcctgatcat
      421 gttgctacag gcttcgttta cataaacgcg tctgcatcta gctacaagga aaattctcat
      481 gagaatattg atgccacgaa agaaggaccc cgtaaggatg cagtttccac tagtacttca
      541 gcccagaaga tacaaaattc tgaagctgcc ttatcattac catcaacgtc aggcaaagag
      601 tcatgctggc tatttgaaga tgatttggga aagaaacatg gtccgcatac tctgatggag
      661 ctttactctt ggcttcatta tgggtatctc aaaggttcgg tgatggtata tcattcggat
      721 gataaagtta agcccaccaa tttgcagtca gtgatagatt catttgtgac cggtggacgt
      781 gaaagtgatt ctgcagctca tcctaattac gttgaagacg aatcttcaac tgattttatt
      841 catgatattt ctgacgaggt ctgctcacaa ttgcattctg gaatcatgaa agcaactaga
      901 aaggttgtgt tggatgaaat agtcagccat gtaataatgg agtgtgtgac tgcaaagaaa
      961 gctgacaggc atctaaatca tgaagagtcc aaacagacag tcaaaacccg ctcattggat
     1021 gccttaatgg taggccccac aaaccaacag ttggatgaat gttctggaag tgaagcagca
     1081 gcatctcgta gtgttcacac acaaaccaca tcttcaaatt ctgttgaata tcatgaatgc
     1141 aataaatttg ttggaacagt ggataacttt tgtggagtgt acattgatgt ttgccgaaag
     1201 cttttcgact ccagcatgca aattatatgg aacgctgtcc tttatgattc agttgcagat
     1261 caattatctg tatggaggaa agaaaaattg tgggccactg gtgatgttgt cgttgaacaa
     1321 cctgtagaag attttggtca agaatcatca tcttctaaga acgattatcc ccctggtttt
     1381 gaagtccctt catcattatc tccccgcgaa gttgattcta aaggagattg tgataaggat
     1441 gatgatttgg aacacacgat tgaaggtgtt aaaaatgaca tccatttatc tgtaaggacg
     1501 tctttgcaga agtatattga aactcttatt gataagcaag tgaggaaagt tgtcaagacc
     1561 aaaagaaaag ctcaaatgaa gatggttact gttgactccc ctgttcaccg cagtcataca
     1621 aaccgatctg atgtttctac atcgcttgca aaatcatctc aacaaaatat gttggtatct
     1681 aggaggcctt catttagttg gtttgcagat gctttcaaga acgtgtatgg acatgacaat
     1741 attgtcaaat ataaatatct taaggagagt tctagaactg ttgttcgaca agcatgcgaa
     1801 tttcgccctt ctgtggcgat ggcatctctt ccaaagattg ggatctatgt tatcttagca
     1861 gcatgtcgac aaaagctgca tgatatcgtg gtcgaggagt ttttatcaat atctgtgaaa
     1921 gatgctatcg ataaacctaa tgaatcgttg cgttcttcta agaagcaaag taatctggat
     1981 acaacagttg taggatcaac taaaacaaag aagaagaagg ctgtaaagtt cattaatgca
     2041 tttgacagat acaaggagca atcaaggaat ggtcaaagct taggacctgt tgaaccatct
     2101 gttggaaagg aagattgtac gtacagccgc acaagaaaga taaagaaaag aaagtttgca
     2161 tctttatctg gtcaatttag tgctgataga ttggttcaga catcaaagat acatgatctt
     2221 tctccactag taaccgagca ggaggtggct gaagcactgt taaaatatgg cgatgaagtt
     2281 gcagtaaatt atcgtgcaaa caaacaatta catgattcca tctttaatga agttcagata
     2341 gcatccgcta gtacgtgtca gaaatctgtt aagatatcta ctcctagtca agataatgat
     2401 agaactgttg gtggtgtaaa gtcacgcaaa gataatgatc cagattttat tcccagtagc
     2461 ctggaagtat ccgctggtaa tccataccaa actggtggaa aatcttccaa agtaggaaag
     2521 ctaaaaaaaa agagttatac ggatgataat gatatacaac aaccatgttc tgtgaaagtt
     2581 cccaagctag caattggtgg tgtcaagaaa gcacagaaga cccaaaagag caagtccacg
     2641 aaatcaaaaa cttgccccgt atctaaagga tgtgcccgtt gttcaatcaa tggttggcaa
     2701 tggcgtaagt ggtcattaca tgcaagtcct gctgaaagga ctagggttcg aggaacttcc
     2761 gtaactattg caaattatac tggtcccgag gccaatgcgt ctcatctttc aagtgcaaag
     2821 ggattatctg ctagaacaaa tagggtgaaa atgcgaagtc tacttgctgc tgcagacggt
     2881 tctgaccttc taaaaactac tcagttaaag gcaaggaaaa aacgtttgcg ttttcaacag
     2941 agcaagatac atgattgggg tcttgttgca cttgagccaa ttgaggcaga agattttgtg
     3001 attgaatacg ttggagaatt aattcgttcc cgtatttctg atatccgtga acaacattac
     3061 gagaagatgg gaattggcag cagttatctt tttagattgg atgatggcta tgtggttgat
     3121 gctacaaagc gcggtggaat tgctagattc ataaaccatt catgtgagcc taattgttat
     3181 actaagatta taagtgttga cggtcagaaa aagatattta tttatgcaaa gcggcatata
     3241 gtttccggag aagaaattac ttacaattac aagttccctt tggaagagaa aaagatccct
     3301 tgcaactgcg gctcaaagag atgccgtgga tcgatgaatt gagaagaaac aaggctctgt
     3361 ttcatggact ggatgagtga tgtgttctaa tttttggaaa tgcattttaa atggagaaca
     3421 aaacgttcaa agtaaatggt gctagaatat tgttgcggat gctttggatg aatccatcaa
     3481 atgacttttt tacccctgtg ctatctcagg atttgttgag tcttttgaag atggacaaca
     3541 gattcatgtg cttattctag tagcttgtct cagtggcaga tgagtttctt cccttaaaat
     3601 tttgtaaatc agtcattcat tggtcaatag ttttctgact ttagaatcct tgtacacact
     3661 tgccacaaat tttgatagaa taattataat tataatataa tcattaatat aaaatataaa
     3721 tttaatttat tgatgatcaa cacttctttt gtgtggctgc ctttgggcgt ggaaagcttg
     3781 ttaagatagt tcttatggtg gtattaaaca tgtatgatta cttccttttg cgtttcatga
     3841 gaattgaaca atagaccact atgtgaaaac ttgatgacat tctcaagcta aaaaagcagc
     3901 ttttcatacg agcataaact ttagtgaaaa catcatataa agtgatagtt gatcactagt
     3961 ttatatataa agcccagatg gatttctcga cgatgaaata atagtatata tttttatatc
     4021 ggcacatttt attgcatcag acagttttaa tgtgatggta atttgtagtt ttctttcttc
     4081 agttggttta ggcgcaggcg tcagtcaagg gtaaaaatgg tttcaacctc aggtgcataa
     4141 gtgatgtttt acaagcggct gcaaacatgt cgttaacgtc tctaggcatc acaaaaagaa
     4201 gctatcaagc tatgatgatt caatttacac tcaacaagta atgacgtgaa ggtcaattgc
     4261 caattgaatt gctattatag ttaaactagc taaaataggg gtaaaagatt ttggtggaag
     4321 gaaccagaaa aatgagtttg aagttatatt aatcaatttt atgtatgatt gtagatggta
     4381 cgctatggtt agctgcttgt ttaaaacacc caacgtaaat taacaaaaga aaaatgagcc
     4441 atgttggatg gccaataaga ttaggttggt gtgtgaaatg gccagtaaga ttaaatacgt
     4501 gtaatcttta aaccatcgca tatttaagac attggtgttc atgaatattg tgtgaaacaa
     4561 caatacatgg acaccacctc taacaatgaa ataattgttg acacaaacca gaaattgttt
     4621 tcaccggggc gaaacttttt tttaaaagcg tagcactttt tttggccaaa acatggatgt
     4681 ttttggggaa aatatgaagg ctttgggggc aaaatatgga gacttggcaa tatatgaaga
     4741 ctttgggggc aaaaaaaaaa aaatcaaaaa tttttgggct aaaaatttca aatccactgg
     4801 gggcggactc ggccaacttc tgtttccgcc cctagttgac accttatatt cttctcccaa
     4861 actgatggag ttaacatttt ttaatacgtt tggctctccg ggagtcttgc agaaatgata
     4921 gagcgaaatg ggttggttgt ccaaagggct atccgattgc gggatagcac aagggcttaa
     4981 ggcgttgttt tgcttaatgt tttttttttt ttacatttaa tttgcgaagt agagcccaac
     5041 ccatctaagg tttttgattt tgtgttgaat tatgtgtatg aattttagaa tgtttgtacg
     5101 tagtccactc ttcatctcaa gctatgtcag aacccgatta tacccgacct tagctcaatg
     5161 gaagagtaga aggatttgac tactcagagt gtaactttgc ctctggtttc tcgtaatcct
     5221 ttggctgccg gttcaagtcc ggcaggttgg tttaatacca catggtttgt agtattctat
     5281 tgccttcttg tttaagccca tgcttgttgt ccccccgtag caatatcaat tttatgcttg
     5341 cacaataact aactcccaac ttttgtccct tcaaattcct ttgctaccaa ctctcgggct
     5401 ttataccgag tatttgagag taaaagatat cgcttccttg attttggtat gtatgattct
     5461 tttgacttgg aacgttatta agtctttggc gacaacatcc gtaactaata ggttaagatt
     5521 ttatttcatc cttttgctat tgttttgtat ggtctagttg ggataatggt gtcacaaaga
     5581 taggtagata atttacttcg tcaatggatg tattaaacaa ggaaaatgtc aaaagtgcac
     5641 tagctcatgt ggatgtcgct ttggggaagg ttagaacgca atacttcgta catattaatc
     5701 aaggaaaatg catcttcaca aagtttggac ccacaattta cctaatatat ggcgagactt
     5761 gaacctacaa agttttgcct catgttaaga cgggattcga ataattgatc tcatgcaact
     5821 ctacgctaca aagacaagtg atcccctcga cttgcacaag ataaaatgat ctcgagcctc
     5881 gttcctgccc ttgcaaagct gaaaatatgt tgcttgttat tctataaatt ttgaagcatg
     5941 cttatgttga gaaagaactc aagatgttgc atatacactc atggctatca caatggtgaa
     6001 aataatattg acaggaatgc tgtccatcct ttgatatggt agaatttacg gcgttccgtc
     6061 tgtctttgtt gtgagcgtct ttcctttgtt ggtagaactt gaatgaatgt gtagatggtt
     6121 attgttcgga acatacacaa ctttgtgcaa ttcttttgtg ccctgtgaca attgcacttg
     6181 ctcgaaaact aaaataagca ataaacattg tgtataagat tgtccggtgt ctctgactac
     6241 aaaggtggtt tttctt
//
LOCUS       XM_071829683            4852 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone-lysine
            N-methyltransferase ATXR7 (LOC139839586), transcript variant X2,
            mRNA.
ACCESSION   XM_071829683
VERSION     XM_071829683.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4852
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4852
                     /gene="LOC139839586"
                     /note="histone-lysine N-methyltransferase ATXR7; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839586"
     CDS             148..3342
                     /gene="LOC139839586"
                     /codon_start=1
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X1"
                     /protein_id="XP_071685784.1"
                     /db_xref="GeneID:139839586"
                     /translation="MQPEIDVNRQSNVGNNGDINKSYVAYDQPAYVSGWMYLNEQGQY
                     CGPYIQQQLYDGLSTNFLPEELPVYPVLQGSLLNPVPLKYFQKYPDHVATGFVYINAS
                     ASSYKENSHENIDATKEGPRKDAVSTSTSAQKIQNSEAALSLPSTSGKESCWLFEDDL
                     GKKHGPHTLMELYSWLHYGYLKGSVMVYHSDDKVKPTNLQSVIDSFVTGGRESDSAAH
                     PNYVEDESSTDFIHDISDEVCSQLHSGIMKATRKVVLDEIVSHVIMECVTAKKADRHL
                     NHEESKQTVKTRSLDALMVGPTNQQLDECSGSEAAASRSVHTQTTSSNSVEYHECNKF
                     VGTVDNFCGVYIDVCRKLFDSSMQIIWNAVLYDSVADQLSVWRKEKLWATGDVVVEQP
                     VEDFGQESSSSKNDYPPGFEVPSSLSPREVDSKGDCDKDDDLEHTIEGVKNDIHLSVR
                     TSLQKYIETLIDKQVRKVVKTKRKAQMKMVTVDSPVHRSHTNRSDVSTSLAKSSQQNM
                     LVSRRPSFSWFADAFKNVYGHDNIVKYKYLKESSRTVVRQACEFRPSVAMASLPKIGI
                     YVILAACRQKLHDIVVEEFLSISVKDAIDKPNESLRSSKKQSNLDTTVVGSTKTKKKK
                     AVKFINAFDRYKEQSRNGQSLGPVEPSVGKEDCTYSRTRKIKKRKFASLSGQFSADRL
                     VQTSKIHDLSPLVTEQEVAEALLKYGDEVAVNYRANKQLHDSIFNEVQIASASTCQKS
                     VKISTPSQDNDRTVGGVKSRKDNDPDFIPSSLEVSAGNPYQTGGKSSKVGKLKKKSYT
                     DDNDIQQPCSVKVPKLAIGGVKKAQKTQKSKSTKSKTCPVSKGCARCSINGWQWRKWS
                     LHASPAERTRVRGTSVTIANYTGPEANASHLSSAKGLSARTNRVKMRSLLAAADGSDL
                     LKTTQLKARKKRLRFQQSKIHDWGLVALEPIEAEDFVIEYVGELIRSRISDIREQHYE
                     KMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKIISVDGQKKIFIYAKRH
                     IVSGEEITYNYKFPLEEKKIPCNCGSKRCRGSMN"
     misc_feature    607..726
                     /gene="LOC139839586"
                     /note="GYF domain; Region: GYF; pfam02213"
                     /db_xref="CDD:460496"
     misc_feature    2884..3327
                     /gene="LOC139839586"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     Region: SET_SETD1; cd19169"
                     /db_xref="CDD:380946"
     misc_feature    order(2947..2958,3007..3009,3085..3102,3142..3159,
                     3181..3189,3214..3216,3262..3279,3283..3294)
                     /gene="LOC139839586"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     misc_feature    order(2947..2958,3085..3087,3145..3159,3268..3270,
                     3283..3294)
                     /gene="LOC139839586"
                     /note="putative SAM binding site; other site"
                     /db_xref="CDD:380946"
     misc_feature    order(3163..3165,3286..3288,3292..3294,3307..3309)
                     /gene="LOC139839586"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:380946"
ORIGIN      
        1 ttccgttcac cgattaatta tcttatcatc tccatcctaa tcctaatcct aatcctaatc
       61 ctaatatttc gatctatatt ttagttttaa tcctttgaaa accatcgatc gatctatata
      121 ttatcagttt acctaaaaga aggtgatatg cagcctgaaa ttgacgtaaa tcgacagtca
      181 aatgttggca ataacggtga tataaacaaa agctatgttg catatgacca gcctgcatat
      241 gtgtctggat ggatgtattt gaatgaacaa ggacaatatt gtggcccata tatacaacag
      301 caactgtatg atgggctatc cactaatttc ttaccagagg aactccctgt ataccctgtt
      361 ttgcaaggaa gtttgttgaa tcctgtgccc ttaaagtact ttcaaaagta tcctgatcat
      421 gttgctacag gcttcgttta cataaacgcg tctgcatcta gctacaagga aaattctcat
      481 gagaatattg atgccacgaa agaaggaccc cgtaaggatg cagtttccac tagtacttca
      541 gcccagaaga tacaaaattc tgaagctgcc ttatcattac catcaacgtc aggcaaagag
      601 tcatgctggc tatttgaaga tgatttggga aagaaacatg gtccgcatac tctgatggag
      661 ctttactctt ggcttcatta tgggtatctc aaaggttcgg tgatggtata tcattcggat
      721 gataaagtta agcccaccaa tttgcagtca gtgatagatt catttgtgac cggtggacgt
      781 gaaagtgatt ctgcagctca tcctaattac gttgaagacg aatcttcaac tgattttatt
      841 catgatattt ctgacgaggt ctgctcacaa ttgcattctg gaatcatgaa agcaactaga
      901 aaggttgtgt tggatgaaat agtcagccat gtaataatgg agtgtgtgac tgcaaagaaa
      961 gctgacaggc atctaaatca tgaagagtcc aaacagacag tcaaaacccg ctcattggat
     1021 gccttaatgg taggccccac aaaccaacag ttggatgaat gttctggaag tgaagcagca
     1081 gcatctcgta gtgttcacac acaaaccaca tcttcaaatt ctgttgaata tcatgaatgc
     1141 aataaatttg ttggaacagt ggataacttt tgtggagtgt acattgatgt ttgccgaaag
     1201 cttttcgact ccagcatgca aattatatgg aacgctgtcc tttatgattc agttgcagat
     1261 caattatctg tatggaggaa agaaaaattg tgggccactg gtgatgttgt cgttgaacaa
     1321 cctgtagaag attttggtca agaatcatca tcttctaaga acgattatcc ccctggtttt
     1381 gaagtccctt catcattatc tccccgcgaa gttgattcta aaggagattg tgataaggat
     1441 gatgatttgg aacacacgat tgaaggtgtt aaaaatgaca tccatttatc tgtaaggacg
     1501 tctttgcaga agtatattga aactcttatt gataagcaag tgaggaaagt tgtcaagacc
     1561 aaaagaaaag ctcaaatgaa gatggttact gttgactccc ctgttcaccg cagtcataca
     1621 aaccgatctg atgtttctac atcgcttgca aaatcatctc aacaaaatat gttggtatct
     1681 aggaggcctt catttagttg gtttgcagat gctttcaaga acgtgtatgg acatgacaat
     1741 attgtcaaat ataaatatct taaggagagt tctagaactg ttgttcgaca agcatgcgaa
     1801 tttcgccctt ctgtggcgat ggcatctctt ccaaagattg ggatctatgt tatcttagca
     1861 gcatgtcgac aaaagctgca tgatatcgtg gtcgaggagt ttttatcaat atctgtgaaa
     1921 gatgctatcg ataaacctaa tgaatcgttg cgttcttcta agaagcaaag taatctggat
     1981 acaacagttg taggatcaac taaaacaaag aagaagaagg ctgtaaagtt cattaatgca
     2041 tttgacagat acaaggagca atcaaggaat ggtcaaagct taggacctgt tgaaccatct
     2101 gttggaaagg aagattgtac gtacagccgc acaagaaaga taaagaaaag aaagtttgca
     2161 tctttatctg gtcaatttag tgctgataga ttggttcaga catcaaagat acatgatctt
     2221 tctccactag taaccgagca ggaggtggct gaagcactgt taaaatatgg cgatgaagtt
     2281 gcagtaaatt atcgtgcaaa caaacaatta catgattcca tctttaatga agttcagata
     2341 gcatccgcta gtacgtgtca gaaatctgtt aagatatcta ctcctagtca agataatgat
     2401 agaactgttg gtggtgtaaa gtcacgcaaa gataatgatc cagattttat tcccagtagc
     2461 ctggaagtat ccgctggtaa tccataccaa actggtggaa aatcttccaa agtaggaaag
     2521 ctaaaaaaaa agagttatac ggatgataat gatatacaac aaccatgttc tgtgaaagtt
     2581 cccaagctag caattggtgg tgtcaagaaa gcacagaaga cccaaaagag caagtccacg
     2641 aaatcaaaaa cttgccccgt atctaaagga tgtgcccgtt gttcaatcaa tggttggcaa
     2701 tggcgtaagt ggtcattaca tgcaagtcct gctgaaagga ctagggttcg aggaacttcc
     2761 gtaactattg caaattatac tggtcccgag gccaatgcgt ctcatctttc aagtgcaaag
     2821 ggattatctg ctagaacaaa tagggtgaaa atgcgaagtc tacttgctgc tgcagacggt
     2881 tctgaccttc taaaaactac tcagttaaag gcaaggaaaa aacgtttgcg ttttcaacag
     2941 agcaagatac atgattgggg tcttgttgca cttgagccaa ttgaggcaga agattttgtg
     3001 attgaatacg ttggagaatt aattcgttcc cgtatttctg atatccgtga acaacattac
     3061 gagaagatgg gaattggcag cagttatctt tttagattgg atgatggcta tgtggttgat
     3121 gctacaaagc gcggtggaat tgctagattc ataaaccatt catgtgagcc taattgttat
     3181 actaagatta taagtgttga cggtcagaaa aagatattta tttatgcaaa gcggcatata
     3241 gtttccggag aagaaattac ttacaattac aagttccctt tggaagagaa aaagatccct
     3301 tgcaactgcg gctcaaagag atgccgtgga tcgatgaatt gagaagaaac aaggctctgt
     3361 ttcatggact ggatgagtga tgtgttctaa tttttggaaa tgcattttaa atggagaaca
     3421 aaacgttcaa agtaaatggt gctagaatat tgttgcggat gctttggatg aatccatcaa
     3481 atgacttttt tacccctgtg ctatctcagg atttgttgag tcttttgaag atggacaaca
     3541 gattcatgtg cttattctag tagcttgtct cagtggcaga tgagtttctt cccttaaaat
     3601 tttgtaaatc agtcattcat tggtcaatag ttttctgact ttagaatcct tgtacacact
     3661 tgccacaaat tttgatagaa taattataat tataatataa tcattaatat aaaatataaa
     3721 tttaatttat tgatgatcaa cacttctttt gtgtggctgc ctttgggcgt ggaaagcttg
     3781 ttaagatagt tcttatggtg gtattaaaca tgtatgatta cttccttttg cgtttcatga
     3841 gaattgaaca atagaccact atgtgaaaac ttgatgacat tctcaagcta aaaaagcagc
     3901 ttttcatacg agcataaact ttagtgaaaa catcatataa agtgatagtt gatcactagt
     3961 ttatatataa agcccagatg gatttctcga cgatgaaata atagtatata tttttatatc
     4021 ggcacatttt attgcatcag acagttttaa tgtgatggta atttgtagtt ttctttcttc
     4081 agttggttta ggcgcaggcg tcagtcaagg gtaaaaatgg tttcaacctc aggtgcataa
     4141 gtgatgtttt acaagcggct gttgggataa tggtgtcaca aagataggta gataatttac
     4201 ttcgtcaatg gatgtattaa acaaggaaaa tgtcaaaagt gcactagctc atgtggatgt
     4261 cgctttgggg aaggttagaa cgcaatactt cgtacatatt aatcaaggaa aatgcatctt
     4321 cacaaagttt ggacccacaa tttacctaat atatggcgag acttgaacct acaaagtttt
     4381 gcctcatgtt aagacgggat tcgaataatt gatctcatgc aactctacgc tacaaagaca
     4441 agtgatcccc tcgacttgca caagataaaa tgatctcgag cctcgttcct gcccttgcaa
     4501 agctgaaaat atgttgcttg ttattctata aattttgaag catgcttatg ttgagaaaga
     4561 actcaagatg ttgcatatac actcatggct atcacaatgg tgaaaataat attgacagga
     4621 atgctgtcca tcctttgata tggtagaatt tacggcgttc cgtctgtctt tgttgtgagc
     4681 gtctttcctt tgttggtaga acttgaatga atgtgtagat ggttattgtt cggaacatac
     4741 acaactttgt gcaattcttt tgtgccctgt gacaattgca cttgctcgaa aactaaaata
     4801 agcaataaac attgtgtata agattgtccg gtgtctctga ctacaaaggt gg
//
LOCUS       XM_071829684            4788 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone-lysine
            N-methyltransferase ATXR7 (LOC139839586), transcript variant X3,
            mRNA.
ACCESSION   XM_071829684
VERSION     XM_071829684.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4788
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4788
                     /gene="LOC139839586"
                     /note="histone-lysine N-methyltransferase ATXR7; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839586"
     CDS             148..3342
                     /gene="LOC139839586"
                     /codon_start=1
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X1"
                     /protein_id="XP_071685785.1"
                     /db_xref="GeneID:139839586"
                     /translation="MQPEIDVNRQSNVGNNGDINKSYVAYDQPAYVSGWMYLNEQGQY
                     CGPYIQQQLYDGLSTNFLPEELPVYPVLQGSLLNPVPLKYFQKYPDHVATGFVYINAS
                     ASSYKENSHENIDATKEGPRKDAVSTSTSAQKIQNSEAALSLPSTSGKESCWLFEDDL
                     GKKHGPHTLMELYSWLHYGYLKGSVMVYHSDDKVKPTNLQSVIDSFVTGGRESDSAAH
                     PNYVEDESSTDFIHDISDEVCSQLHSGIMKATRKVVLDEIVSHVIMECVTAKKADRHL
                     NHEESKQTVKTRSLDALMVGPTNQQLDECSGSEAAASRSVHTQTTSSNSVEYHECNKF
                     VGTVDNFCGVYIDVCRKLFDSSMQIIWNAVLYDSVADQLSVWRKEKLWATGDVVVEQP
                     VEDFGQESSSSKNDYPPGFEVPSSLSPREVDSKGDCDKDDDLEHTIEGVKNDIHLSVR
                     TSLQKYIETLIDKQVRKVVKTKRKAQMKMVTVDSPVHRSHTNRSDVSTSLAKSSQQNM
                     LVSRRPSFSWFADAFKNVYGHDNIVKYKYLKESSRTVVRQACEFRPSVAMASLPKIGI
                     YVILAACRQKLHDIVVEEFLSISVKDAIDKPNESLRSSKKQSNLDTTVVGSTKTKKKK
                     AVKFINAFDRYKEQSRNGQSLGPVEPSVGKEDCTYSRTRKIKKRKFASLSGQFSADRL
                     VQTSKIHDLSPLVTEQEVAEALLKYGDEVAVNYRANKQLHDSIFNEVQIASASTCQKS
                     VKISTPSQDNDRTVGGVKSRKDNDPDFIPSSLEVSAGNPYQTGGKSSKVGKLKKKSYT
                     DDNDIQQPCSVKVPKLAIGGVKKAQKTQKSKSTKSKTCPVSKGCARCSINGWQWRKWS
                     LHASPAERTRVRGTSVTIANYTGPEANASHLSSAKGLSARTNRVKMRSLLAAADGSDL
                     LKTTQLKARKKRLRFQQSKIHDWGLVALEPIEAEDFVIEYVGELIRSRISDIREQHYE
                     KMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKIISVDGQKKIFIYAKRH
                     IVSGEEITYNYKFPLEEKKIPCNCGSKRCRGSMN"
     misc_feature    607..726
                     /gene="LOC139839586"
                     /note="GYF domain; Region: GYF; pfam02213"
                     /db_xref="CDD:460496"
     misc_feature    2884..3327
                     /gene="LOC139839586"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     Region: SET_SETD1; cd19169"
                     /db_xref="CDD:380946"
     misc_feature    order(2947..2958,3007..3009,3085..3102,3142..3159,
                     3181..3189,3214..3216,3262..3279,3283..3294)
                     /gene="LOC139839586"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     misc_feature    order(2947..2958,3085..3087,3145..3159,3268..3270,
                     3283..3294)
                     /gene="LOC139839586"
                     /note="putative SAM binding site; other site"
                     /db_xref="CDD:380946"
     misc_feature    order(3163..3165,3286..3288,3292..3294,3307..3309)
                     /gene="LOC139839586"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:380946"
ORIGIN      
        1 ttccgttcac cgattaatta tcttatcatc tccatcctaa tcctaatcct aatcctaatc
       61 ctaatatttc gatctatatt ttagttttaa tcctttgaaa accatcgatc gatctatata
      121 ttatcagttt acctaaaaga aggtgatatg cagcctgaaa ttgacgtaaa tcgacagtca
      181 aatgttggca ataacggtga tataaacaaa agctatgttg catatgacca gcctgcatat
      241 gtgtctggat ggatgtattt gaatgaacaa ggacaatatt gtggcccata tatacaacag
      301 caactgtatg atgggctatc cactaatttc ttaccagagg aactccctgt ataccctgtt
      361 ttgcaaggaa gtttgttgaa tcctgtgccc ttaaagtact ttcaaaagta tcctgatcat
      421 gttgctacag gcttcgttta cataaacgcg tctgcatcta gctacaagga aaattctcat
      481 gagaatattg atgccacgaa agaaggaccc cgtaaggatg cagtttccac tagtacttca
      541 gcccagaaga tacaaaattc tgaagctgcc ttatcattac catcaacgtc aggcaaagag
      601 tcatgctggc tatttgaaga tgatttggga aagaaacatg gtccgcatac tctgatggag
      661 ctttactctt ggcttcatta tgggtatctc aaaggttcgg tgatggtata tcattcggat
      721 gataaagtta agcccaccaa tttgcagtca gtgatagatt catttgtgac cggtggacgt
      781 gaaagtgatt ctgcagctca tcctaattac gttgaagacg aatcttcaac tgattttatt
      841 catgatattt ctgacgaggt ctgctcacaa ttgcattctg gaatcatgaa agcaactaga
      901 aaggttgtgt tggatgaaat agtcagccat gtaataatgg agtgtgtgac tgcaaagaaa
      961 gctgacaggc atctaaatca tgaagagtcc aaacagacag tcaaaacccg ctcattggat
     1021 gccttaatgg taggccccac aaaccaacag ttggatgaat gttctggaag tgaagcagca
     1081 gcatctcgta gtgttcacac acaaaccaca tcttcaaatt ctgttgaata tcatgaatgc
     1141 aataaatttg ttggaacagt ggataacttt tgtggagtgt acattgatgt ttgccgaaag
     1201 cttttcgact ccagcatgca aattatatgg aacgctgtcc tttatgattc agttgcagat
     1261 caattatctg tatggaggaa agaaaaattg tgggccactg gtgatgttgt cgttgaacaa
     1321 cctgtagaag attttggtca agaatcatca tcttctaaga acgattatcc ccctggtttt
     1381 gaagtccctt catcattatc tccccgcgaa gttgattcta aaggagattg tgataaggat
     1441 gatgatttgg aacacacgat tgaaggtgtt aaaaatgaca tccatttatc tgtaaggacg
     1501 tctttgcaga agtatattga aactcttatt gataagcaag tgaggaaagt tgtcaagacc
     1561 aaaagaaaag ctcaaatgaa gatggttact gttgactccc ctgttcaccg cagtcataca
     1621 aaccgatctg atgtttctac atcgcttgca aaatcatctc aacaaaatat gttggtatct
     1681 aggaggcctt catttagttg gtttgcagat gctttcaaga acgtgtatgg acatgacaat
     1741 attgtcaaat ataaatatct taaggagagt tctagaactg ttgttcgaca agcatgcgaa
     1801 tttcgccctt ctgtggcgat ggcatctctt ccaaagattg ggatctatgt tatcttagca
     1861 gcatgtcgac aaaagctgca tgatatcgtg gtcgaggagt ttttatcaat atctgtgaaa
     1921 gatgctatcg ataaacctaa tgaatcgttg cgttcttcta agaagcaaag taatctggat
     1981 acaacagttg taggatcaac taaaacaaag aagaagaagg ctgtaaagtt cattaatgca
     2041 tttgacagat acaaggagca atcaaggaat ggtcaaagct taggacctgt tgaaccatct
     2101 gttggaaagg aagattgtac gtacagccgc acaagaaaga taaagaaaag aaagtttgca
     2161 tctttatctg gtcaatttag tgctgataga ttggttcaga catcaaagat acatgatctt
     2221 tctccactag taaccgagca ggaggtggct gaagcactgt taaaatatgg cgatgaagtt
     2281 gcagtaaatt atcgtgcaaa caaacaatta catgattcca tctttaatga agttcagata
     2341 gcatccgcta gtacgtgtca gaaatctgtt aagatatcta ctcctagtca agataatgat
     2401 agaactgttg gtggtgtaaa gtcacgcaaa gataatgatc cagattttat tcccagtagc
     2461 ctggaagtat ccgctggtaa tccataccaa actggtggaa aatcttccaa agtaggaaag
     2521 ctaaaaaaaa agagttatac ggatgataat gatatacaac aaccatgttc tgtgaaagtt
     2581 cccaagctag caattggtgg tgtcaagaaa gcacagaaga cccaaaagag caagtccacg
     2641 aaatcaaaaa cttgccccgt atctaaagga tgtgcccgtt gttcaatcaa tggttggcaa
     2701 tggcgtaagt ggtcattaca tgcaagtcct gctgaaagga ctagggttcg aggaacttcc
     2761 gtaactattg caaattatac tggtcccgag gccaatgcgt ctcatctttc aagtgcaaag
     2821 ggattatctg ctagaacaaa tagggtgaaa atgcgaagtc tacttgctgc tgcagacggt
     2881 tctgaccttc taaaaactac tcagttaaag gcaaggaaaa aacgtttgcg ttttcaacag
     2941 agcaagatac atgattgggg tcttgttgca cttgagccaa ttgaggcaga agattttgtg
     3001 attgaatacg ttggagaatt aattcgttcc cgtatttctg atatccgtga acaacattac
     3061 gagaagatgg gaattggcag cagttatctt tttagattgg atgatggcta tgtggttgat
     3121 gctacaaagc gcggtggaat tgctagattc ataaaccatt catgtgagcc taattgttat
     3181 actaagatta taagtgttga cggtcagaaa aagatattta tttatgcaaa gcggcatata
     3241 gtttccggag aagaaattac ttacaattac aagttccctt tggaagagaa aaagatccct
     3301 tgcaactgcg gctcaaagag atgccgtgga tcgatgaatt gagaagaaac aaggctctgt
     3361 ttcatggact ggatgagtga tgtgttctaa tttttggaaa tgcattttaa atggagaaca
     3421 aaacgttcaa agtaaatggt gctagaatat tgttgcggat gctttggatg aatccatcaa
     3481 atgacttttt tacccctgtg ctatctcagg atttgttgag tcttttgaag atggacaaca
     3541 gattcatgtg cttattctag tagcttgtct cagtggcaga tgagtttctt cccttaaaat
     3601 tttgtaaatc agtcattcat tggtcaatag ttttctgact ttagaatcct tgtacacact
     3661 tgccacaaat tttgatagaa taattataat tataatataa tcattaatat aaaatataaa
     3721 tttaatttat tgatgatcaa cacttctttt gtgtggctgc ctttgggcgt ggaaagcttg
     3781 ttaagatagt tcttatggtg gtattaaaca tgtatgatta cttccttttg cgtttcatga
     3841 gaattgaaca atagaccact atgtgaaaac ttgatgacat tctcaagcta aaaaagcagc
     3901 ttttcatacg agcataaact ttagtgaaaa catcatataa agtgatagtt gatcactagt
     3961 ttatatataa agcccagatg gatttctcga cgatgaaata atagtatata tttttatatc
     4021 ggcacatttt attgcatcag acagttttaa tgtgatggta atttgtagtt ttctttcttc
     4081 agttggttta ggcgcaggcg tcagtcaagg gtaaaaatgg tttcaacctc aggtgcataa
     4141 gtgatgtttt acaagcggct ggaaaatgtc aaaagtgcac tagctcatgt ggatgtcgct
     4201 ttggggaagg ttagaacgca atacttcgta catattaatc aaggaaaatg catcttcaca
     4261 aagtttggac ccacaattta cctaatatat ggcgagactt gaacctacaa agttttgcct
     4321 catgttaaga cgggattcga ataattgatc tcatgcaact ctacgctaca aagacaagtg
     4381 atcccctcga cttgcacaag ataaaatgat ctcgagcctc gttcctgccc ttgcaaagct
     4441 gaaaatatgt tgcttgttat tctataaatt ttgaagcatg cttatgttga gaaagaactc
     4501 aagatgttgc atatacactc atggctatca caatggtgaa aataatattg acaggaatgc
     4561 tgtccatcct ttgatatggt agaatttacg gcgttccgtc tgtctttgtt gtgagcgtct
     4621 ttcctttgtt ggtagaactt gaatgaatgt gtagatggtt attgttcgga acatacacaa
     4681 ctttgtgcaa ttcttttgtg ccctgtgaca attgcacttg ctcgaaaact aaaataagca
     4741 ataaacattg tgtataagat tgtccggtgt ctctgactac aaaggtgg
//
LOCUS       XM_071829685            6178 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone-lysine
            N-methyltransferase ATXR7 (LOC139839586), transcript variant X4,
            mRNA.
ACCESSION   XM_071829685
VERSION     XM_071829685.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6178
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6178
                     /gene="LOC139839586"
                     /note="histone-lysine N-methyltransferase ATXR7; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839586"
     CDS             148..3342
                     /gene="LOC139839586"
                     /codon_start=1
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X1"
                     /protein_id="XP_071685786.1"
                     /db_xref="GeneID:139839586"
                     /translation="MQPEIDVNRQSNVGNNGDINKSYVAYDQPAYVSGWMYLNEQGQY
                     CGPYIQQQLYDGLSTNFLPEELPVYPVLQGSLLNPVPLKYFQKYPDHVATGFVYINAS
                     ASSYKENSHENIDATKEGPRKDAVSTSTSAQKIQNSEAALSLPSTSGKESCWLFEDDL
                     GKKHGPHTLMELYSWLHYGYLKGSVMVYHSDDKVKPTNLQSVIDSFVTGGRESDSAAH
                     PNYVEDESSTDFIHDISDEVCSQLHSGIMKATRKVVLDEIVSHVIMECVTAKKADRHL
                     NHEESKQTVKTRSLDALMVGPTNQQLDECSGSEAAASRSVHTQTTSSNSVEYHECNKF
                     VGTVDNFCGVYIDVCRKLFDSSMQIIWNAVLYDSVADQLSVWRKEKLWATGDVVVEQP
                     VEDFGQESSSSKNDYPPGFEVPSSLSPREVDSKGDCDKDDDLEHTIEGVKNDIHLSVR
                     TSLQKYIETLIDKQVRKVVKTKRKAQMKMVTVDSPVHRSHTNRSDVSTSLAKSSQQNM
                     LVSRRPSFSWFADAFKNVYGHDNIVKYKYLKESSRTVVRQACEFRPSVAMASLPKIGI
                     YVILAACRQKLHDIVVEEFLSISVKDAIDKPNESLRSSKKQSNLDTTVVGSTKTKKKK
                     AVKFINAFDRYKEQSRNGQSLGPVEPSVGKEDCTYSRTRKIKKRKFASLSGQFSADRL
                     VQTSKIHDLSPLVTEQEVAEALLKYGDEVAVNYRANKQLHDSIFNEVQIASASTCQKS
                     VKISTPSQDNDRTVGGVKSRKDNDPDFIPSSLEVSAGNPYQTGGKSSKVGKLKKKSYT
                     DDNDIQQPCSVKVPKLAIGGVKKAQKTQKSKSTKSKTCPVSKGCARCSINGWQWRKWS
                     LHASPAERTRVRGTSVTIANYTGPEANASHLSSAKGLSARTNRVKMRSLLAAADGSDL
                     LKTTQLKARKKRLRFQQSKIHDWGLVALEPIEAEDFVIEYVGELIRSRISDIREQHYE
                     KMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKIISVDGQKKIFIYAKRH
                     IVSGEEITYNYKFPLEEKKIPCNCGSKRCRGSMN"
     misc_feature    607..726
                     /gene="LOC139839586"
                     /note="GYF domain; Region: GYF; pfam02213"
                     /db_xref="CDD:460496"
     misc_feature    2884..3327
                     /gene="LOC139839586"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     Region: SET_SETD1; cd19169"
                     /db_xref="CDD:380946"
     misc_feature    order(2947..2958,3007..3009,3085..3102,3142..3159,
                     3181..3189,3214..3216,3262..3279,3283..3294)
                     /gene="LOC139839586"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     misc_feature    order(2947..2958,3085..3087,3145..3159,3268..3270,
                     3283..3294)
                     /gene="LOC139839586"
                     /note="putative SAM binding site; other site"
                     /db_xref="CDD:380946"
     misc_feature    order(3163..3165,3286..3288,3292..3294,3307..3309)
                     /gene="LOC139839586"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:380946"
ORIGIN      
        1 ttccgttcac cgattaatta tcttatcatc tccatcctaa tcctaatcct aatcctaatc
       61 ctaatatttc gatctatatt ttagttttaa tcctttgaaa accatcgatc gatctatata
      121 ttatcagttt acctaaaaga aggtgatatg cagcctgaaa ttgacgtaaa tcgacagtca
      181 aatgttggca ataacggtga tataaacaaa agctatgttg catatgacca gcctgcatat
      241 gtgtctggat ggatgtattt gaatgaacaa ggacaatatt gtggcccata tatacaacag
      301 caactgtatg atgggctatc cactaatttc ttaccagagg aactccctgt ataccctgtt
      361 ttgcaaggaa gtttgttgaa tcctgtgccc ttaaagtact ttcaaaagta tcctgatcat
      421 gttgctacag gcttcgttta cataaacgcg tctgcatcta gctacaagga aaattctcat
      481 gagaatattg atgccacgaa agaaggaccc cgtaaggatg cagtttccac tagtacttca
      541 gcccagaaga tacaaaattc tgaagctgcc ttatcattac catcaacgtc aggcaaagag
      601 tcatgctggc tatttgaaga tgatttggga aagaaacatg gtccgcatac tctgatggag
      661 ctttactctt ggcttcatta tgggtatctc aaaggttcgg tgatggtata tcattcggat
      721 gataaagtta agcccaccaa tttgcagtca gtgatagatt catttgtgac cggtggacgt
      781 gaaagtgatt ctgcagctca tcctaattac gttgaagacg aatcttcaac tgattttatt
      841 catgatattt ctgacgaggt ctgctcacaa ttgcattctg gaatcatgaa agcaactaga
      901 aaggttgtgt tggatgaaat agtcagccat gtaataatgg agtgtgtgac tgcaaagaaa
      961 gctgacaggc atctaaatca tgaagagtcc aaacagacag tcaaaacccg ctcattggat
     1021 gccttaatgg taggccccac aaaccaacag ttggatgaat gttctggaag tgaagcagca
     1081 gcatctcgta gtgttcacac acaaaccaca tcttcaaatt ctgttgaata tcatgaatgc
     1141 aataaatttg ttggaacagt ggataacttt tgtggagtgt acattgatgt ttgccgaaag
     1201 cttttcgact ccagcatgca aattatatgg aacgctgtcc tttatgattc agttgcagat
     1261 caattatctg tatggaggaa agaaaaattg tgggccactg gtgatgttgt cgttgaacaa
     1321 cctgtagaag attttggtca agaatcatca tcttctaaga acgattatcc ccctggtttt
     1381 gaagtccctt catcattatc tccccgcgaa gttgattcta aaggagattg tgataaggat
     1441 gatgatttgg aacacacgat tgaaggtgtt aaaaatgaca tccatttatc tgtaaggacg
     1501 tctttgcaga agtatattga aactcttatt gataagcaag tgaggaaagt tgtcaagacc
     1561 aaaagaaaag ctcaaatgaa gatggttact gttgactccc ctgttcaccg cagtcataca
     1621 aaccgatctg atgtttctac atcgcttgca aaatcatctc aacaaaatat gttggtatct
     1681 aggaggcctt catttagttg gtttgcagat gctttcaaga acgtgtatgg acatgacaat
     1741 attgtcaaat ataaatatct taaggagagt tctagaactg ttgttcgaca agcatgcgaa
     1801 tttcgccctt ctgtggcgat ggcatctctt ccaaagattg ggatctatgt tatcttagca
     1861 gcatgtcgac aaaagctgca tgatatcgtg gtcgaggagt ttttatcaat atctgtgaaa
     1921 gatgctatcg ataaacctaa tgaatcgttg cgttcttcta agaagcaaag taatctggat
     1981 acaacagttg taggatcaac taaaacaaag aagaagaagg ctgtaaagtt cattaatgca
     2041 tttgacagat acaaggagca atcaaggaat ggtcaaagct taggacctgt tgaaccatct
     2101 gttggaaagg aagattgtac gtacagccgc acaagaaaga taaagaaaag aaagtttgca
     2161 tctttatctg gtcaatttag tgctgataga ttggttcaga catcaaagat acatgatctt
     2221 tctccactag taaccgagca ggaggtggct gaagcactgt taaaatatgg cgatgaagtt
     2281 gcagtaaatt atcgtgcaaa caaacaatta catgattcca tctttaatga agttcagata
     2341 gcatccgcta gtacgtgtca gaaatctgtt aagatatcta ctcctagtca agataatgat
     2401 agaactgttg gtggtgtaaa gtcacgcaaa gataatgatc cagattttat tcccagtagc
     2461 ctggaagtat ccgctggtaa tccataccaa actggtggaa aatcttccaa agtaggaaag
     2521 ctaaaaaaaa agagttatac ggatgataat gatatacaac aaccatgttc tgtgaaagtt
     2581 cccaagctag caattggtgg tgtcaagaaa gcacagaaga cccaaaagag caagtccacg
     2641 aaatcaaaaa cttgccccgt atctaaagga tgtgcccgtt gttcaatcaa tggttggcaa
     2701 tggcgtaagt ggtcattaca tgcaagtcct gctgaaagga ctagggttcg aggaacttcc
     2761 gtaactattg caaattatac tggtcccgag gccaatgcgt ctcatctttc aagtgcaaag
     2821 ggattatctg ctagaacaaa tagggtgaaa atgcgaagtc tacttgctgc tgcagacggt
     2881 tctgaccttc taaaaactac tcagttaaag gcaaggaaaa aacgtttgcg ttttcaacag
     2941 agcaagatac atgattgggg tcttgttgca cttgagccaa ttgaggcaga agattttgtg
     3001 attgaatacg ttggagaatt aattcgttcc cgtatttctg atatccgtga acaacattac
     3061 gagaagatgg gaattggcag cagttatctt tttagattgg atgatggcta tgtggttgat
     3121 gctacaaagc gcggtggaat tgctagattc ataaaccatt catgtgagcc taattgttat
     3181 actaagatta taagtgttga cggtcagaaa aagatattta tttatgcaaa gcggcatata
     3241 gtttccggag aagaaattac ttacaattac aagttccctt tggaagagaa aaagatccct
     3301 tgcaactgcg gctcaaagag atgccgtgga tcgatgaatt gagaagaaac aaggctctgt
     3361 ttcatggact ggatgagtga tgtgttctaa tttttggaaa tgcattttaa atggagaaca
     3421 aaacgttcaa agatttgttg agtcttttga agatggacaa cagattcatg tgcttattct
     3481 agtagcttgt ctcagtggca gatgagtttc ttcccttaaa attttgtaaa tcagtcattc
     3541 attggtcaat agttttctga ctttagaatc cttgtacaca cttgccacaa attttgatag
     3601 aataattata attataatat aatcattaat ataaaatata aatttaattt attgatgatc
     3661 aacacttctt ttgtgtggct gcctttgggc gtggaaagct tgttaagata gttcttatgg
     3721 tggtattaaa catgtatgat tacttccttt tgcgtttcat gagaattgaa caatagacca
     3781 ctatgtgaaa acttgatgac attctcaagc taaaaaagca gcttttcata cgagcataaa
     3841 ctttagtgaa aacatcatat aaagtgatag ttgatcacta gtttatatat aaagcccaga
     3901 tggatttctc gacgatgaaa taatagtata tatttttata tcggcacatt ttattgcatc
     3961 agacagtttt aatgtgatgg taatttgtag ttttctttct tcagttggtt taggcgcagg
     4021 cgtcagtcaa gggtaaaaat ggtttcaacc tcaggtgcat aagtgatgtt ttacaagcgg
     4081 ctgcaaacat gtcgttaacg tctctaggca tcacaaaaag aagctatcaa gctatgatga
     4141 ttcaatttac actcaacaag taatgacgtg aaggtcaatt gccaattgaa ttgctattat
     4201 agttaaacta gctaaaatag gggtaaaaga ttttggtgga aggaaccaga aaaatgagtt
     4261 tgaagttata ttaatcaatt ttatgtatga ttgtagatgg tacgctatgg ttagctgctt
     4321 gtttaaaaca cccaacgtaa attaacaaaa gaaaaatgag ccatgttgga tggccaataa
     4381 gattaggttg gtgtgtgaaa tggccagtaa gattaaatac gtgtaatctt taaaccatcg
     4441 catatttaag acattggtgt tcatgaatat tgtgtgaaac aacaatacat ggacaccacc
     4501 tctaacaatg aaataattgt tgacacaaac cagaaattgt tttcaccggg gcgaaacttt
     4561 tttttaaaag cgtagcactt tttttggcca aaacatggat gtttttgggg aaaatatgaa
     4621 ggctttgggg gcaaaatatg gagacttggc aatatatgaa gactttgggg gcaaaaaaaa
     4681 aaaaatcaaa aatttttggg ctaaaaattt caaatccact gggggcggac tcggccaact
     4741 tctgtttccg cccctagttg acaccttata ttcttctccc aaactgatgg agttaacatt
     4801 ttttaatacg tttggctctc cgggagtctt gcagaaatga tagagcgaaa tgggttggtt
     4861 gtccaaaggg ctatccgatt gcgggatagc acaagggctt aaggcgttgt tttgcttaat
     4921 gttttttttt ttttacattt aatttgcgaa gtagagccca acccatctaa ggtttttgat
     4981 tttgtgttga attatgtgta tgaattttag aatgtttgta cgtagtccac tcttcatctc
     5041 aagctatgtc agaacccgat tatacccgac cttagctcaa tggaagagta gaaggatttg
     5101 actactcaga gtgtaacttt gcctctggtt tctcgtaatc ctttggctgc cggttcaagt
     5161 ccggcaggtt ggtttaatac cacatggttt gtagtattct attgccttct tgtttaagcc
     5221 catgcttgtt gtccccccgt agcaatatca attttatgct tgcacaataa ctaactccca
     5281 acttttgtcc cttcaaattc ctttgctacc aactctcggg ctttataccg agtatttgag
     5341 agtaaaagat atcgcttcct tgattttggt atgtatgatt cttttgactt ggaacgttat
     5401 taagtctttg gcgacaacat ccgtaactaa taggttaaga ttttatttca tccttttgct
     5461 attgttttgt atggtctagt tgggataatg gtgtcacaaa gataggtaga taatttactt
     5521 cgtcaatgga tgtattaaac aaggaaaatg tcaaaagtgc actagctcat gtggatgtcg
     5581 ctttggggaa ggttagaacg caatacttcg tacatattaa tcaaggaaaa tgcatcttca
     5641 caaagtttgg acccacaatt tacctaatat atggcgagac ttgaacctac aaagttttgc
     5701 ctcatgttaa gacgggattc gaataattga tctcatgcaa ctctacgcta caaagacaag
     5761 tgatcccctc gacttgcaca agataaaatg atctcgagcc tcgttcctgc ccttgcaaag
     5821 ctgaaaatat gttgcttgtt attctataaa ttttgaagca tgcttatgtt gagaaagaac
     5881 tcaagatgtt gcatatacac tcatggctat cacaatggtg aaaataatat tgacaggaat
     5941 gctgtccatc ctttgatatg gtagaattta cggcgttccg tctgtctttg ttgtgagcgt
     6001 ctttcctttg ttggtagaac ttgaatgaat gtgtagatgg ttattgttcg gaacatacac
     6061 aactttgtgc aattcttttg tgccctgtga caattgcact tgctcgaaaa ctaaaataag
     6121 caataaacat tgtgtataag attgtccggt gtctctgact acaaaggtgg tttttctt
//
LOCUS       XM_071829686            6180 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone-lysine
            N-methyltransferase ATXR7 (LOC139839586), transcript variant X5,
            mRNA.
ACCESSION   XM_071829686
VERSION     XM_071829686.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6180
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6180
                     /gene="LOC139839586"
                     /note="histone-lysine N-methyltransferase ATXR7; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839586"
     CDS             148..3264
                     /gene="LOC139839586"
                     /codon_start=1
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X2"
                     /protein_id="XP_071685787.1"
                     /db_xref="GeneID:139839586"
                     /translation="MQPEIDVNRQSNVGNNGDINKSYVAYDQPAYVSGWMYLNEQGQY
                     CGPYIQQQLYDGLSTNFLPEELPVYPVLQGSLLNPVPLKYFQKYPDHVATGFVYINAS
                     ASSYKENSHENIDATKEGPRKDAVSTSTSAQKIQNSEAALSLPSTSGKESCWLFEDDL
                     GKKHGPHTLMELYSWLHYGYLKGSVMVYHSDDKVKPTNLQSVIDSFVTGGRESDSAAH
                     PNYVEDESSTDFIHDISDEVCSQLHSGIMKATRKVVLDEIVSHVIMECVTAKKADRHL
                     NHEESKQTVKTRSLDALMVGPTNQQLDECSGSEAAASRSVHTQTTSSNSVEYHECNKF
                     VGTVDNFCGVYIDVCRKLFDSSMQIIWNAVLYDSVADQLSVWRKEKLWATGDVVVEQP
                     VEDFGQESSSSKNDYPPGFEVPSSLSPREVDSKGDCDKDDDLEHTIEGVKNDIHLSVR
                     TSLQKYIETLIDKQVRKVVKTKRKAQMKMVTVDSPVHRSHTNRSDVSTSLAKSSQQNM
                     LVSRRPSFSWFADAFKNVYGHDNIVKYKYLKESSRTVVRQACEFRPSVAMASLPKIGI
                     YVILAACRQKLHDIVVEEFLSISVKDAIDKPNESLRSSKKQSNLDTTVVGSTKTKKKK
                     AVKFINAFDRYKEQSRNGQSLGPVEPSVGKEDCTYSRTRKIKKRKFASLSGQFSADRL
                     VQTSKIHDLSPLVTEQEVAEALLKYGDEVAVNYRANKQLHDSIFNEVQIASASTCQKS
                     VKISTPSQDNDRTVGGVKSRKDNDPDFIPSSLEVSAGNPYQTGGKSSKVGKLKKKSYT
                     DDNDIQQPCSVKVPKLAIGGVKKAQKTQKSKSTKSKTCPVSKGCARCSINGWQWRKWS
                     LHASPAERTRVRGTSVTIANYTGPEANASHLSSAKGLSARTNRVKMRSLLAAADGSDL
                     LKTTQLKARKKRLRFQQSKIHDWGLVALEPIEAEDFVIEYVGELIRSRISDIREQHYE
                     KMGIGSSYLFRLDDGYVVDATKRGGIARFINHSFSGEEITYNYKFPLEEKKIPCNCGS
                     KRCRGSMN"
     misc_feature    607..726
                     /gene="LOC139839586"
                     /note="GYF domain; Region: GYF; pfam02213"
                     /db_xref="CDD:460496"
     misc_feature    2884..3249
                     /gene="LOC139839586"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; Region: SET; cl40432"
                     /db_xref="CDD:394802"
     misc_feature    order(2953..2958,3142..3159,3184..3195)
                     /gene="LOC139839586"
                     /note="active site"
                     /db_xref="CDD:380914"
     misc_feature    order(2953..2958,3145..3159,3190..3192)
                     /gene="LOC139839586"
                     /note="SAM binding site [polypeptide binding]; other site"
                     /db_xref="CDD:380914"
ORIGIN      
        1 ttccgttcac cgattaatta tcttatcatc tccatcctaa tcctaatcct aatcctaatc
       61 ctaatatttc gatctatatt ttagttttaa tcctttgaaa accatcgatc gatctatata
      121 ttatcagttt acctaaaaga aggtgatatg cagcctgaaa ttgacgtaaa tcgacagtca
      181 aatgttggca ataacggtga tataaacaaa agctatgttg catatgacca gcctgcatat
      241 gtgtctggat ggatgtattt gaatgaacaa ggacaatatt gtggcccata tatacaacag
      301 caactgtatg atgggctatc cactaatttc ttaccagagg aactccctgt ataccctgtt
      361 ttgcaaggaa gtttgttgaa tcctgtgccc ttaaagtact ttcaaaagta tcctgatcat
      421 gttgctacag gcttcgttta cataaacgcg tctgcatcta gctacaagga aaattctcat
      481 gagaatattg atgccacgaa agaaggaccc cgtaaggatg cagtttccac tagtacttca
      541 gcccagaaga tacaaaattc tgaagctgcc ttatcattac catcaacgtc aggcaaagag
      601 tcatgctggc tatttgaaga tgatttggga aagaaacatg gtccgcatac tctgatggag
      661 ctttactctt ggcttcatta tgggtatctc aaaggttcgg tgatggtata tcattcggat
      721 gataaagtta agcccaccaa tttgcagtca gtgatagatt catttgtgac cggtggacgt
      781 gaaagtgatt ctgcagctca tcctaattac gttgaagacg aatcttcaac tgattttatt
      841 catgatattt ctgacgaggt ctgctcacaa ttgcattctg gaatcatgaa agcaactaga
      901 aaggttgtgt tggatgaaat agtcagccat gtaataatgg agtgtgtgac tgcaaagaaa
      961 gctgacaggc atctaaatca tgaagagtcc aaacagacag tcaaaacccg ctcattggat
     1021 gccttaatgg taggccccac aaaccaacag ttggatgaat gttctggaag tgaagcagca
     1081 gcatctcgta gtgttcacac acaaaccaca tcttcaaatt ctgttgaata tcatgaatgc
     1141 aataaatttg ttggaacagt ggataacttt tgtggagtgt acattgatgt ttgccgaaag
     1201 cttttcgact ccagcatgca aattatatgg aacgctgtcc tttatgattc agttgcagat
     1261 caattatctg tatggaggaa agaaaaattg tgggccactg gtgatgttgt cgttgaacaa
     1321 cctgtagaag attttggtca agaatcatca tcttctaaga acgattatcc ccctggtttt
     1381 gaagtccctt catcattatc tccccgcgaa gttgattcta aaggagattg tgataaggat
     1441 gatgatttgg aacacacgat tgaaggtgtt aaaaatgaca tccatttatc tgtaaggacg
     1501 tctttgcaga agtatattga aactcttatt gataagcaag tgaggaaagt tgtcaagacc
     1561 aaaagaaaag ctcaaatgaa gatggttact gttgactccc ctgttcaccg cagtcataca
     1621 aaccgatctg atgtttctac atcgcttgca aaatcatctc aacaaaatat gttggtatct
     1681 aggaggcctt catttagttg gtttgcagat gctttcaaga acgtgtatgg acatgacaat
     1741 attgtcaaat ataaatatct taaggagagt tctagaactg ttgttcgaca agcatgcgaa
     1801 tttcgccctt ctgtggcgat ggcatctctt ccaaagattg ggatctatgt tatcttagca
     1861 gcatgtcgac aaaagctgca tgatatcgtg gtcgaggagt ttttatcaat atctgtgaaa
     1921 gatgctatcg ataaacctaa tgaatcgttg cgttcttcta agaagcaaag taatctggat
     1981 acaacagttg taggatcaac taaaacaaag aagaagaagg ctgtaaagtt cattaatgca
     2041 tttgacagat acaaggagca atcaaggaat ggtcaaagct taggacctgt tgaaccatct
     2101 gttggaaagg aagattgtac gtacagccgc acaagaaaga taaagaaaag aaagtttgca
     2161 tctttatctg gtcaatttag tgctgataga ttggttcaga catcaaagat acatgatctt
     2221 tctccactag taaccgagca ggaggtggct gaagcactgt taaaatatgg cgatgaagtt
     2281 gcagtaaatt atcgtgcaaa caaacaatta catgattcca tctttaatga agttcagata
     2341 gcatccgcta gtacgtgtca gaaatctgtt aagatatcta ctcctagtca agataatgat
     2401 agaactgttg gtggtgtaaa gtcacgcaaa gataatgatc cagattttat tcccagtagc
     2461 ctggaagtat ccgctggtaa tccataccaa actggtggaa aatcttccaa agtaggaaag
     2521 ctaaaaaaaa agagttatac ggatgataat gatatacaac aaccatgttc tgtgaaagtt
     2581 cccaagctag caattggtgg tgtcaagaaa gcacagaaga cccaaaagag caagtccacg
     2641 aaatcaaaaa cttgccccgt atctaaagga tgtgcccgtt gttcaatcaa tggttggcaa
     2701 tggcgtaagt ggtcattaca tgcaagtcct gctgaaagga ctagggttcg aggaacttcc
     2761 gtaactattg caaattatac tggtcccgag gccaatgcgt ctcatctttc aagtgcaaag
     2821 ggattatctg ctagaacaaa tagggtgaaa atgcgaagtc tacttgctgc tgcagacggt
     2881 tctgaccttc taaaaactac tcagttaaag gcaaggaaaa aacgtttgcg ttttcaacag
     2941 agcaagatac atgattgggg tcttgttgca cttgagccaa ttgaggcaga agattttgtg
     3001 attgaatacg ttggagaatt aattcgttcc cgtatttctg atatccgtga acaacattac
     3061 gagaagatgg gaattggcag cagttatctt tttagattgg atgatggcta tgtggttgat
     3121 gctacaaagc gcggtggaat tgctagattc ataaaccatt cattttccgg agaagaaatt
     3181 acttacaatt acaagttccc tttggaagag aaaaagatcc cttgcaactg cggctcaaag
     3241 agatgccgtg gatcgatgaa ttgagaagaa acaaggctct gtttcatgga ctggatgagt
     3301 gatgtgttct aatttttgga aatgcatttt aaatggagaa caaaacgttc aaagtaaatg
     3361 gtgctagaat attgttgcgg atgctttgga tgaatccatc aaatgacttt tttacccctg
     3421 tgctatctca ggatttgttg agtcttttga agatggacaa cagattcatg tgcttattct
     3481 agtagcttgt ctcagtggca gatgagtttc ttcccttaaa attttgtaaa tcagtcattc
     3541 attggtcaat agttttctga ctttagaatc cttgtacaca cttgccacaa attttgatag
     3601 aataattata attataatat aatcattaat ataaaatata aatttaattt attgatgatc
     3661 aacacttctt ttgtgtggct gcctttgggc gtggaaagct tgttaagata gttcttatgg
     3721 tggtattaaa catgtatgat tacttccttt tgcgtttcat gagaattgaa caatagacca
     3781 ctatgtgaaa acttgatgac attctcaagc taaaaaagca gcttttcata cgagcataaa
     3841 ctttagtgaa aacatcatat aaagtgatag ttgatcacta gtttatatat aaagcccaga
     3901 tggatttctc gacgatgaaa taatagtata tatttttata tcggcacatt ttattgcatc
     3961 agacagtttt aatgtgatgg taatttgtag ttttctttct tcagttggtt taggcgcagg
     4021 cgtcagtcaa gggtaaaaat ggtttcaacc tcaggtgcat aagtgatgtt ttacaagcgg
     4081 ctgcaaacat gtcgttaacg tctctaggca tcacaaaaag aagctatcaa gctatgatga
     4141 ttcaatttac actcaacaag taatgacgtg aaggtcaatt gccaattgaa ttgctattat
     4201 agttaaacta gctaaaatag gggtaaaaga ttttggtgga aggaaccaga aaaatgagtt
     4261 tgaagttata ttaatcaatt ttatgtatga ttgtagatgg tacgctatgg ttagctgctt
     4321 gtttaaaaca cccaacgtaa attaacaaaa gaaaaatgag ccatgttgga tggccaataa
     4381 gattaggttg gtgtgtgaaa tggccagtaa gattaaatac gtgtaatctt taaaccatcg
     4441 catatttaag acattggtgt tcatgaatat tgtgtgaaac aacaatacat ggacaccacc
     4501 tctaacaatg aaataattgt tgacacaaac cagaaattgt tttcaccggg gcgaaacttt
     4561 tttttaaaag cgtagcactt tttttggcca aaacatggat gtttttgggg aaaatatgaa
     4621 ggctttgggg gcaaaatatg gagacttggc aatatatgaa gactttgggg gcaaaaaaaa
     4681 aaaaatcaaa aatttttggg ctaaaaattt caaatccact gggggcggac tcggccaact
     4741 tctgtttccg cccctagttg acaccttata ttcttctccc aaactgatgg agttaacatt
     4801 ttttaatacg tttggctctc cgggagtctt gcagaaatga tagagcgaaa tgggttggtt
     4861 gtccaaaggg ctatccgatt gcgggatagc acaagggctt aaggcgttgt tttgcttaat
     4921 gttttttttt ttttacattt aatttgcgaa gtagagccca acccatctaa ggtttttgat
     4981 tttgtgttga attatgtgta tgaattttag aatgtttgta cgtagtccac tcttcatctc
     5041 aagctatgtc agaacccgat tatacccgac cttagctcaa tggaagagta gaaggatttg
     5101 actactcaga gtgtaacttt gcctctggtt tctcgtaatc ctttggctgc cggttcaagt
     5161 ccggcaggtt ggtttaatac cacatggttt gtagtattct attgccttct tgtttaagcc
     5221 catgcttgtt gtccccccgt agcaatatca attttatgct tgcacaataa ctaactccca
     5281 acttttgtcc cttcaaattc ctttgctacc aactctcggg ctttataccg agtatttgag
     5341 agtaaaagat atcgcttcct tgattttggt atgtatgatt cttttgactt ggaacgttat
     5401 taagtctttg gcgacaacat ccgtaactaa taggttaaga ttttatttca tccttttgct
     5461 attgttttgt atggtctagt tgggataatg gtgtcacaaa gataggtaga taatttactt
     5521 cgtcaatgga tgtattaaac aaggaaaatg tcaaaagtgc actagctcat gtggatgtcg
     5581 ctttggggaa ggttagaacg caatacttcg tacatattaa tcaaggaaaa tgcatcttca
     5641 caaagtttgg acccacaatt tacctaatat atggcgagac ttgaacctac aaagttttgc
     5701 ctcatgttaa gacgggattc gaataattga tctcatgcaa ctctacgcta caaagacaag
     5761 tgatcccctc gacttgcaca agataaaatg atctcgagcc tcgttcctgc ccttgcaaag
     5821 ctgaaaatat gttgcttgtt attctataaa ttttgaagca tgcttatgtt gagaaagaac
     5881 tcaagatgtt gcatatacac tcatggctat cacaatggtg aaaataatat tgacaggaat
     5941 gctgtccatc ctttgatatg gtagaattta cggcgttccg tctgtctttg ttgtgagcgt
     6001 ctttcctttg ttggtagaac ttgaatgaat gtgtagatgg ttattgttcg gaacatacac
     6061 aactttgtgc aattcttttg tgccctgtga caattgcact tgctcgaaaa ctaaaataag
     6121 caataaacat tgtgtataag attgtccggt gtctctgact acaaaggtgg tttttcttag
//
LOCUS       XM_071829687            5770 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone-lysine
            N-methyltransferase ATXR7 (LOC139839586), transcript variant X6,
            mRNA.
ACCESSION   XM_071829687
VERSION     XM_071829687.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5770
                     /gene="LOC139839586"
                     /note="histone-lysine N-methyltransferase ATXR7; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839586"
     CDS             171..2858
                     /gene="LOC139839586"
                     /codon_start=1
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X3"
                     /protein_id="XP_071685788.1"
                     /db_xref="GeneID:139839586"
                     /translation="MELYSWLHYGYLKGSVMVYHSDDKVKPTNLQSVIDSFVTGGRES
                     DSAAHPNYVEDESSTDFIHDISDEVCSQLHSGIMKATRKVVLDEIVSHVIMECVTAKK
                     ADRHLNHEESKQTVKTRSLDALMVGPTNQQLDECSGSEAAASRSVHTQTTSSNSVEYH
                     ECNKFVGTVDNFCGVYIDVCRKLFDSSMQIIWNAVLYDSVADQLSVWRKEKLWATGDV
                     VVEQPVEDFGQESSSSKNDYPPGFEVPSSLSPREVDSKGDCDKDDDLEHTIEGVKNDI
                     HLSVRTSLQKYIETLIDKQVRKVVKTKRKAQMKMVTVDSPVHRSHTNRSDVSTSLAKS
                     SQQNMLVSRRPSFSWFADAFKNVYGHDNIVKYKYLKESSRTVVRQACEFRPSVAMASL
                     PKIGIYVILAACRQKLHDIVVEEFLSISVKDAIDKPNESLRSSKKQSNLDTTVVGSTK
                     TKKKKAVKFINAFDRYKEQSRNGQSLGPVEPSVGKEDCTYSRTRKIKKRKFASLSGQF
                     SADRLVQTSKIHDLSPLVTEQEVAEALLKYGDEVAVNYRANKQLHDSIFNEVQIASAS
                     TCQKSVKISTPSQDNDRTVGGVKSRKDNDPDFIPSSLEVSAGNPYQTGGKSSKVGKLK
                     KKSYTDDNDIQQPCSVKVPKLAIGGVKKAQKTQKSKSTKSKTCPVSKGCARCSINGWQ
                     WRKWSLHASPAERTRVRGTSVTIANYTGPEANASHLSSAKGLSARTNRVKMRSLLAAA
                     DGSDLLKTTQLKARKKRLRFQQSKIHDWGLVALEPIEAEDFVIEYVGELIRSRISDIR
                     EQHYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKIISVDGQKKIFI
                     YAKRHIVSGEEITYNYKFPLEEKKIPCNCGSKRCRGSMN"
     misc_feature    2400..2843
                     /gene="LOC139839586"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     Region: SET_SETD1; cd19169"
                     /db_xref="CDD:380946"
     misc_feature    order(2463..2474,2523..2525,2601..2618,2658..2675,
                     2697..2705,2730..2732,2778..2795,2799..2810)
                     /gene="LOC139839586"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     misc_feature    order(2463..2474,2601..2603,2661..2675,2784..2786,
                     2799..2810)
                     /gene="LOC139839586"
                     /note="putative SAM binding site; other site"
                     /db_xref="CDD:380946"
     misc_feature    order(2679..2681,2802..2804,2808..2810,2823..2825)
                     /gene="LOC139839586"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:380946"
ORIGIN      
        1 gagaatattg atgccacgaa agaaggaccc cgtaaggatg cagtttccac tagtacttca
       61 gcccagaaga tacaaaattc tgaagctgcc ttatcattac catcaacggc aaagagtcat
      121 gctggctatt tgaagatgat ttgggaaaga aacatggtcc gcatactctg atggagcttt
      181 actcttggct tcattatggg tatctcaaag gttcggtgat ggtatatcat tcggatgata
      241 aagttaagcc caccaatttg cagtcagtga tagattcatt tgtgaccggt ggacgtgaaa
      301 gtgattctgc agctcatcct aattacgttg aagacgaatc ttcaactgat tttattcatg
      361 atatttctga cgaggtctgc tcacaattgc attctggaat catgaaagca actagaaagg
      421 ttgtgttgga tgaaatagtc agccatgtaa taatggagtg tgtgactgca aagaaagctg
      481 acaggcatct aaatcatgaa gagtccaaac agacagtcaa aacccgctca ttggatgcct
      541 taatggtagg ccccacaaac caacagttgg atgaatgttc tggaagtgaa gcagcagcat
      601 ctcgtagtgt tcacacacaa accacatctt caaattctgt tgaatatcat gaatgcaata
      661 aatttgttgg aacagtggat aacttttgtg gagtgtacat tgatgtttgc cgaaagcttt
      721 tcgactccag catgcaaatt atatggaacg ctgtccttta tgattcagtt gcagatcaat
      781 tatctgtatg gaggaaagaa aaattgtggg ccactggtga tgttgtcgtt gaacaacctg
      841 tagaagattt tggtcaagaa tcatcatctt ctaagaacga ttatccccct ggttttgaag
      901 tcccttcatc attatctccc cgcgaagttg attctaaagg agattgtgat aaggatgatg
      961 atttggaaca cacgattgaa ggtgttaaaa atgacatcca tttatctgta aggacgtctt
     1021 tgcagaagta tattgaaact cttattgata agcaagtgag gaaagttgtc aagaccaaaa
     1081 gaaaagctca aatgaagatg gttactgttg actcccctgt tcaccgcagt catacaaacc
     1141 gatctgatgt ttctacatcg cttgcaaaat catctcaaca aaatatgttg gtatctagga
     1201 ggccttcatt tagttggttt gcagatgctt tcaagaacgt gtatggacat gacaatattg
     1261 tcaaatataa atatcttaag gagagttcta gaactgttgt tcgacaagca tgcgaatttc
     1321 gcccttctgt ggcgatggca tctcttccaa agattgggat ctatgttatc ttagcagcat
     1381 gtcgacaaaa gctgcatgat atcgtggtcg aggagttttt atcaatatct gtgaaagatg
     1441 ctatcgataa acctaatgaa tcgttgcgtt cttctaagaa gcaaagtaat ctggatacaa
     1501 cagttgtagg atcaactaaa acaaagaaga agaaggctgt aaagttcatt aatgcatttg
     1561 acagatacaa ggagcaatca aggaatggtc aaagcttagg acctgttgaa ccatctgttg
     1621 gaaaggaaga ttgtacgtac agccgcacaa gaaagataaa gaaaagaaag tttgcatctt
     1681 tatctggtca atttagtgct gatagattgg ttcagacatc aaagatacat gatctttctc
     1741 cactagtaac cgagcaggag gtggctgaag cactgttaaa atatggcgat gaagttgcag
     1801 taaattatcg tgcaaacaaa caattacatg attccatctt taatgaagtt cagatagcat
     1861 ccgctagtac gtgtcagaaa tctgttaaga tatctactcc tagtcaagat aatgatagaa
     1921 ctgttggtgg tgtaaagtca cgcaaagata atgatccaga ttttattccc agtagcctgg
     1981 aagtatccgc tggtaatcca taccaaactg gtggaaaatc ttccaaagta ggaaagctaa
     2041 aaaaaaagag ttatacggat gataatgata tacaacaacc atgttctgtg aaagttccca
     2101 agctagcaat tggtggtgtc aagaaagcac agaagaccca aaagagcaag tccacgaaat
     2161 caaaaacttg ccccgtatct aaaggatgtg cccgttgttc aatcaatggt tggcaatggc
     2221 gtaagtggtc attacatgca agtcctgctg aaaggactag ggttcgagga acttccgtaa
     2281 ctattgcaaa ttatactggt cccgaggcca atgcgtctca tctttcaagt gcaaagggat
     2341 tatctgctag aacaaatagg gtgaaaatgc gaagtctact tgctgctgca gacggttctg
     2401 accttctaaa aactactcag ttaaaggcaa ggaaaaaacg tttgcgtttt caacagagca
     2461 agatacatga ttggggtctt gttgcacttg agccaattga ggcagaagat tttgtgattg
     2521 aatacgttgg agaattaatt cgttcccgta tttctgatat ccgtgaacaa cattacgaga
     2581 agatgggaat tggcagcagt tatcttttta gattggatga tggctatgtg gttgatgcta
     2641 caaagcgcgg tggaattgct agattcataa accattcatg tgagcctaat tgttatacta
     2701 agattataag tgttgacggt cagaaaaaga tatttattta tgcaaagcgg catatagttt
     2761 ccggagaaga aattacttac aattacaagt tccctttgga agagaaaaag atcccttgca
     2821 actgcggctc aaagagatgc cgtggatcga tgaattgaga agaaacaagg ctctgtttca
     2881 tggactggat gagtgatgtg ttctaatttt tggaaatgca ttttaaatgg agaacaaaac
     2941 gttcaaagta aatggtgcta gaatattgtt gcggatgctt tggatgaatc catcaaatga
     3001 cttttttacc cctgtgctat ctcaggattt gttgagtctt ttgaagatgg acaacagatt
     3061 catgtgctta ttctagtagc ttgtctcagt ggcagatgag tttcttccct taaaattttg
     3121 taaatcagtc attcattggt caatagtttt ctgactttag aatccttgta cacacttgcc
     3181 acaaattttg atagaataat tataattata atataatcat taatataaaa tataaattta
     3241 atttattgat gatcaacact tcttttgtgt ggctgccttt gggcgtggaa agcttgttaa
     3301 gatagttctt atggtggtat taaacatgta tgattacttc cttttgcgtt tcatgagaat
     3361 tgaacaatag accactatgt gaaaacttga tgacattctc aagctaaaaa agcagctttt
     3421 catacgagca taaactttag tgaaaacatc atataaagtg atagttgatc actagtttat
     3481 atataaagcc cagatggatt tctcgacgat gaaataatag tatatatttt tatatcggca
     3541 cattttattg catcagacag ttttaatgtg atggtaattt gtagttttct ttcttcagtt
     3601 ggtttaggcg caggcgtcag tcaagggtaa aaatggtttc aacctcaggt gcataagtga
     3661 tgttttacaa gcggctgcaa acatgtcgtt aacgtctcta ggcatcacaa aaagaagcta
     3721 tcaagctatg atgattcaat ttacactcaa caagtaatga cgtgaaggtc aattgccaat
     3781 tgaattgcta ttatagttaa actagctaaa ataggggtaa aagattttgg tggaaggaac
     3841 cagaaaaatg agtttgaagt tatattaatc aattttatgt atgattgtag atggtacgct
     3901 atggttagct gcttgtttaa aacacccaac gtaaattaac aaaagaaaaa tgagccatgt
     3961 tggatggcca ataagattag gttggtgtgt gaaatggcca gtaagattaa atacgtgtaa
     4021 tctttaaacc atcgcatatt taagacattg gtgttcatga atattgtgtg aaacaacaat
     4081 acatggacac cacctctaac aatgaaataa ttgttgacac aaaccagaaa ttgttttcac
     4141 cggggcgaaa ctttttttta aaagcgtagc actttttttg gccaaaacat ggatgttttt
     4201 ggggaaaata tgaaggcttt gggggcaaaa tatggagact tggcaatata tgaagacttt
     4261 gggggcaaaa aaaaaaaaat caaaaatttt tgggctaaaa atttcaaatc cactgggggc
     4321 ggactcggcc aacttctgtt tccgccccta gttgacacct tatattcttc tcccaaactg
     4381 atggagttaa cattttttaa tacgtttggc tctccgggag tcttgcagaa atgatagagc
     4441 gaaatgggtt ggttgtccaa agggctatcc gattgcggga tagcacaagg gcttaaggcg
     4501 ttgttttgct taatgttttt ttttttttac atttaatttg cgaagtagag cccaacccat
     4561 ctaaggtttt tgattttgtg ttgaattatg tgtatgaatt ttagaatgtt tgtacgtagt
     4621 ccactcttca tctcaagcta tgtcagaacc cgattatacc cgaccttagc tcaatggaag
     4681 agtagaagga tttgactact cagagtgtaa ctttgcctct ggtttctcgt aatcctttgg
     4741 ctgccggttc aagtccggca ggttggttta ataccacatg gtttgtagta ttctattgcc
     4801 ttcttgttta agcccatgct tgttgtcccc ccgtagcaat atcaatttta tgcttgcaca
     4861 ataactaact cccaactttt gtcccttcaa attcctttgc taccaactct cgggctttat
     4921 accgagtatt tgagagtaaa agatatcgct tccttgattt tggtatgtat gattcttttg
     4981 acttggaacg ttattaagtc tttggcgaca acatccgtaa ctaataggtt aagattttat
     5041 ttcatccttt tgctattgtt ttgtatggtc tagttgggat aatggtgtca caaagatagg
     5101 tagataattt acttcgtcaa tggatgtatt aaacaaggaa aatgtcaaaa gtgcactagc
     5161 tcatgtggat gtcgctttgg ggaaggttag aacgcaatac ttcgtacata ttaatcaagg
     5221 aaaatgcatc ttcacaaagt ttggacccac aatttaccta atatatggcg agacttgaac
     5281 ctacaaagtt ttgcctcatg ttaagacggg attcgaataa ttgatctcat gcaactctac
     5341 gctacaaaga caagtgatcc cctcgacttg cacaagataa aatgatctcg agcctcgttc
     5401 ctgcccttgc aaagctgaaa atatgttgct tgttattcta taaattttga agcatgctta
     5461 tgttgagaaa gaactcaaga tgttgcatat acactcatgg ctatcacaat ggtgaaaata
     5521 atattgacag gaatgctgtc catcctttga tatggtagaa tttacggcgt tccgtctgtc
     5581 tttgttgtga gcgtctttcc tttgttggta gaacttgaat gaatgtgtag atggttattg
     5641 ttcggaacat acacaacttt gtgcaattct tttgtgccct gtgacaattg cacttgctcg
     5701 aaaactaaaa taagcaataa acattgtgta taagattgtc cggtgtctct gactacaaag
     5761 gtggtttttc
//
LOCUS       XM_071829688            1837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipase A(1) LCAT3
            (LOC139839587), mRNA.
ACCESSION   XM_071829688
VERSION     XM_071829688.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1837
                     /gene="LOC139839587"
                     /note="phospholipase A(1) LCAT3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839587"
     CDS             206..1540
                     /gene="LOC139839587"
                     /codon_start=1
                     /product="phospholipase A(1) LCAT3"
                     /protein_id="XP_071685789.1"
                     /db_xref="GeneID:139839587"
                     /translation="MVCRKWWCFGDDSDDDEVDLDPILLVSGIGGSILNSKPKSWFGL
                     TTRVWVRIFLADLEFRKRVWSLYNPDTGYTEALDDSSDLVIPDDDYGLYAIDILDPSF
                     WIKLFHITDVYHFHDMIDMLVDCGYKKGTTLFGYGYDFRQSNRIDQLMDGLKEKLETA
                     YNAAGGRKVNLISHSMGGLLVSCFISLHSDVFSKYVKKWITIATPFQGAPGCINDSLL
                     TGLQFVDGIEGYFFVSRWSMHQLLVECPSIYEMMPNPEFKWKKQPEIVVWRGNSSNAD
                     GSVKMETYGTSGCVELFVEALKDNTIEYNKETIPLPFNYDIYKWAATTRKMLNNVQLP
                     EGIEFYNIYGTEIETPFDVYYGSETDPINDASEICQSLPEYSYVDGDGTVPAESAMAD
                     GFGATERVGIPGAHRALLRDETVFVYLRKWLGIEEPSSSHVKTSKVVDVNTS"
     misc_feature    269..1537
                     /gene="LOC139839587"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
     polyA_site      1837
                     /gene="LOC139839587"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttctggtc ttatttttct cccctgtttt ttatattaaa ttcaatttat taaaattaca
       61 cttcctttat tatatgtgac taccatatca agtaagtagc tcactaacgc caacaactac
      121 cctcaacaaa caaaacgtgt ttcatttccc aaagcaaagc acaggtggtt gtaaagaaaa
      181 caagaattgg caaattagaa gaaaaatggt atgtagaaaa tggtggtgtt ttggtgacga
      241 cagcgatgat gatgaggtcg atcttgaccc gattcttctg gtgagtggta ttggtgggag
      301 tattctcaat tcaaaaccca agagctggtt cgggttaacc acccgggttt gggtccgaat
      361 ctttcttgct gatctggagt tcagaaaaag agtttggtct ctttacaatc ctgacactgg
      421 ctacacagaa gcattggatg atagttcgga tcttgtgatt ccagatgacg attacggact
      481 ttatgcgatt gatattcttg atccctcttt ttggataaaa ttgtttcaca ttacggatgt
      541 atatcatttt catgacatga tcgacatgct tgttgattgt ggatacaaga aagggaccac
      601 attgtttgga tatggatatg atttccgtca aagtaataga attgatcaat taatggatgg
      661 ccttaaggaa aagctggaaa ctgcgtataa tgctgcaggg ggtagaaaag tcaaccttat
      721 atcgcattcg atgggtggat tgttagtgtc gtgtttcata tcactacatt ctgatgtgtt
      781 ttccaagtac gtgaaaaagt ggataactat tgcaacccct ttccaaggtg caccgggatg
      841 catcaatgat tctcttttaa ctggattaca gtttgtggat ggaattgaag gctacttctt
      901 tgtgtcgagg tggtcaatgc atcaactgtt agtggaatgc ccatcgatat atgagatgat
      961 gcctaatcca gaattcaaat ggaaaaagca acctgaaatt gtggtttgga gaggcaattc
     1021 aagcaatgca gacggttcgg ttaaaatgga gacttacggc acatcgggat gtgttgagct
     1081 gtttgtagaa gcattgaagg acaacacgat tgagtataat aaggagacta tacctttgcc
     1141 tttcaactat gatatctaca aatgggctgc tactacacgc aagatgctaa acaacgtgca
     1201 gcttcccgaa gggatcgagt tctacaacat ttacggaact gaaatagaaa caccattcga
     1261 tgtttattat ggttcagaaa ctgatccaat caatgatgca tctgagatct gccaatcatt
     1321 gcctgaatac tcatatgtgg atggagatgg aacagttccc gctgaatctg caatggcaga
     1381 tggatttgga gcaacagagc gagtaggaat cccaggtgct cacagggcgc tactaagaga
     1441 tgaaaccgta ttcgtatact tacgcaagtg gttgggaata gaagaaccaa gcagctcaca
     1501 tgttaagacc tccaaagttg tcgacgtcaa tacatcttga agcttgtatg aatgtgtttg
     1561 gttcaaggtg atattagtta tggtcttgta tcgtaatact aattactaat tcatgatgct
     1621 aagaacgcaa acgtatttgc aacttggtga cattattgag ggacctagtt atagttatgt
     1681 ataataagcg ttcaagtcct agatgcttta tgttaagatc agctggtacc gaatatctga
     1741 atcgtgcacg aaggcagctt gatgtagtgt tataaatttg gtgactagtg agtttgatag
     1801 ttaaatagtg taaagtggca aaagtgtctt gttgtca
//
LOCUS       XM_071829689            1942 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839588), mRNA.
ACCESSION   XM_071829689
VERSION     XM_071829689.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1942
                     /gene="LOC139839588"
                     /note="uncharacterized LOC139839588; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839588"
     CDS             46..1689
                     /gene="LOC139839588"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685790.1"
                     /db_xref="GeneID:139839588"
                     /translation="METEIEDKKQSIQDEFIESESEEEEILWSSDSEIGEALDYLDSK
                     DDTGAVDGALILNARRPNAHGGVHSRPNASPLQPLSNRNQKFTNHIRASPLEEWEGRW
                     NSGMSNSVTTAIRESVRGMAIGKTKTTEKADRATVEQAIDPRTRMVLFKMLNRGVFHD
                     INGCISTGKEANVYHATKSDGQELAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNP
                     RKMVKTWAEKEMRNLMRLKAAGIRCPTPLLLRLHVLVMEFIGTTGWAAPRLKDAALSL
                     DKLREGYVEMITIMRVLYQKCKLVHGDLSEYNILYHEGHMYIIDVSQSVDLDHPHALD
                     FLREDCVHVSDFFKKHGVAVMTIRELFDFIVDPSINEDSVDSYLEEAQRKVLARGDEI
                     SAEDEIADAVFIQSFIPKTLDNVKDAEADVNRITSGQDTGDMYYQTITGLKHAISIEQ
                     QQQQREANVHQDTPTDPTQSISQDHESQTESDEDNSEDSEVDDEFSGDEKQTPLERKA
                     ARKENKKKVKEEKREARKTKVPKAVKKKKKKLAKAKKTR"
     misc_feature    526..1095
                     /gene="LOC139839588"
                     /note="Catalytic domain of the atypical protein serine
                     kinase, Eukaryotic RIO1 kinase; Region: RIO1_euk; cd05147"
                     /db_xref="CDD:270698"
     misc_feature    order(538..540,553..558,562..564,598..600,604..606,
                     775..777,811..822,847..849,967..969,973..975,1000..1005)
                     /gene="LOC139839588"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270698"
     polyA_site      1942
                     /gene="LOC139839588"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctaaaaccc taaaccttac gagtattcaa ttacaatcgc ctacaatgga aaccgaaatt
       61 gaagataaaa aacaatcaat tcaagatgaa tttattgaat cggaatcaga ggaagaagag
      121 atattgtggt catcagattc tgaaatagga gaagcattag attacttaga ttctaaagat
      181 gataccggag ctgttgacgg agccctaatt ctcaacgccc gacgcccgaa tgcacacggt
      241 ggagttcatt cacggcctaa cgcgtcacca ctacaaccgc tttcgaatcg gaatcagaag
      301 tttactaatc atattagggc ttcaccttta gaggagtggg aaggaaggtg gaattctggg
      361 atgtcaaatt ctgttaccac agctatccgt gagagtgtgc gagggatggc gattggtaaa
      421 actaaaacta ctgaaaaagc tgacagagca acagttgagc aggcaattga ccctagaact
      481 cgcatggttt tattcaaaat gttgaatcgt ggtgtttttc atgatataaa tggctgcata
      541 tcaactggga aggaggcaaa tgtatatcat gctacaaaat ctgatggcca ggaacttgca
      601 ataaaggtct acaaaacttc cgttcttgtg ttcaaggata gagatcgcta tgtacaaggt
      661 gattatcggt tcagatatgg atattgcaag cacaacccaa ggaaaatggt gaagacttgg
      721 gctgagaagg aaatgagaaa tcttatgcga ctgaaagcag caggaattcg ttgccccact
      781 ccacttcttt taaggcttca tgttttggtt atggagttca taggcacgac aggatgggct
      841 gcacctcgac ttaaagatgc tgcactgtct ctggacaagt tacgagaagg ttatgtagag
      901 atgataacta taatgcgggt gttgtatcaa aagtgtaagc ttgtacatgg agaccttagt
      961 gagtataaca tactgtacca tgagggtcac atgtacatca ttgatgtatc tcaatcagtt
     1021 gatcttgatc atcctcacgc acttgatttt ctgagagagg attgtgttca tgtatctgat
     1081 ttctttaaga aacacggtgt agctgttatg actatccgag agttgtttga ctttatcgtt
     1141 gacccatcaa ttaatgagga ttccgtggac agttacttgg aggaggctca aagaaaagtc
     1201 ttggctcgtg gagatgagat ctctgcagag gatgaaattg ctgatgctgt tttcatccag
     1261 tcgttcattc caaagacact agataacgtg aaggatgctg aagccgatgt aaatcggata
     1321 acaagtggtc aagacacagg agacatgtac tatcaaacca ttactggact taaacacgct
     1381 atttcaattg aacaacaaca acaacaacgt gaagcaaatg ttcatcaaga cacccctact
     1441 gatccaacac aatctatctc acaagatcat gaatcacaaa ctgaatcaga tgaagataac
     1501 tctgaggatt ctgaagttga tgacgaattt tcaggtgatg aaaaacagac gcctttggag
     1561 agaaaagcag ctaggaaaga aaataagaaa aaagtaaaag aagagaaaag agaagctcgt
     1621 aagactaaag tgccaaaagc tgtcaagaag aaaaagaaga aattggcgaa agcgaagaaa
     1681 actcgttaga aaatgacact ctgattaagc ggtttagtca ggtctttttg tggcagtaga
     1741 tgcgggtctg attttgcacc aagattgttt tatattgtag gaaatcttaa attattctgt
     1801 actattacgt gagcttttac tgtacctttt ttcagttaat gtattaatat taattgatgt
     1861 cttatgtcgt ttaaatgatg taactagtat gtgcaaacag tgaggtagtt cttataaaaa
     1921 tggataattt tctgttatgt ta
//
LOCUS       XM_071829690            4310 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable serine/threonine
            protein kinase IREH1 (LOC139839589), transcript variant X1, mRNA.
ACCESSION   XM_071829690
VERSION     XM_071829690.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4310
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4310
                     /gene="LOC139839589"
                     /note="probable serine/threonine protein kinase IREH1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 24 Proteins"
                     /db_xref="GeneID:139839589"
     CDS             51..3821
                     /gene="LOC139839589"
                     /codon_start=1
                     /product="probable serine/threonine protein kinase IREH1"
                     /protein_id="XP_071685791.1"
                     /db_xref="GeneID:139839589"
                     /translation="MVFKGRFFSSKKSSGTSSPEGSNSPRSSGSNSNSPIKSDKKKPK
                     SKADHHPPIAAATTSSFRQTQVKDASSTSTSTSSSNSQIPVSSSTKPNLNRKPAPAVS
                     PILASSLGLNRIKTRSGPLPQESFLDFNSSNNGKIGASNLSKSKNSSGSDGSSLGDKK
                     KKMAFENGADKNVNSSDGKAKTSLRDQTPNVIGRSPLRNGESSSEAAGRMKSRGYSGN
                     LRSSDMLTPEMKTSYDCENPKESESPRFQAILRVTSAPRKRYPNDIKSFSHELNSKGV
                     RPFPHWKPRGTNNVEEVLSMIRAKFDKAKEEVDVDLHILAGDLLGILEKNAESQPQWQ
                     ENLEDLLVLAQRCAMTSPGEFWLQCEGIVQELDDKRQELPMGIIKQLHTRMLFILTRC
                     TRLLQFHKESGLAEDELVLQLRQSLHSSDKLISGASKPSKPPSSRKFFSEEQHGLPGL
                     DLKKEKSVKPEKMLTPSPLETTRNLDSPSGRDRMASWKKFPSPGGKSPTEEVLVKEMG
                     DNKVGQVARNVDLTTMKPSEQIKDPNVQTSTPYKHQHRVSWGWGDQPNIDDESSIICR
                     ICEEEVPTLQVEDHSRVCAIADRCDQTGLRVDERLVRVAETLEKLMDSISQKDYQHVV
                     RSPDGTKVSNYSVTEEFDNNMSPKLSDLSRRGSEDMLDCLPDNSVSMEDLKGMPSMSC
                     RTRFGPKSDQGMTTSSAGSMTPRSPMMTPRTSQIDLLLSGKSAYSEHGDLPQISELAD
                     IARCAGNTPLNDDRSLSYLLTCLDDLRVVVDRRKFDALTVETFGARIEKLIREKYLQL
                     CEMVDDEKVDITSTVIDEDAPLEDDVVRSLRTSPMHSGKDRTSIDDFEIIKPISRGAF
                     GRVFLAKKRTTGDLFAIKVLKKACMIRKNAVESILAERDILISVRNPFVVRFFYSFTC
                     RENLYLVMEYLNGGDLYSLLRNLGCLDEDVARIYIAEVVLALEYLHSLRVVHRDLKPD
                     NLLIAHDGHIKLTDFGLSKVGLIDSTDDLSGPAMSGTSLLGENASQSQSLSESQQEIR
                     KNRSAVGTPDYLAPEILLGTGHGTSADWWSVGVILFELIVGIPPFNAEHPQMIFDNIL
                     NRNIPWPAVPDEMSPDAQDLIDQLLTEDPNQRLGARGATEVKQHPYFRDINWDTLARQ
                     KAAFIPSSESALDTSYFTSRYTWSNSEQVYAASDIENSSDDGSMSSSSCISHHNEEVA
                     DDFGGLSELDPGYAVNYSFSNFSFKNLSQLASINYDLLTKGLKDDTSTNPNV"
     misc_feature    2601..3470
                     /gene="LOC139839589"
                     /note="Catalytic domain of Microtubule-associated
                     serine/threonine (MAST) kinase-like proteins; Region:
                     STKc_MAST_like; cd05579"
                     /db_xref="CDD:270731"
     misc_feature    order(2601..2615,2625..2627,2664..2666,2670..2672,
                     2766..2768,2814..2819,2823..2825,2835..2837,2841..2843,
                     2952..2954,2958..2960,2964..2969,2973..2975,3003..3008,
                     3015..3017,3153..3170,3249..3251,3267..3269,3276..3278)
                     /gene="LOC139839589"
                     /note="active site"
                     /db_xref="CDD:270731"
     misc_feature    order(2601..2615,2625..2627,2664..2666,2670..2672,
                     2766..2768,2817..2825,2835..2837,2952..2954,2958..2960,
                     2964..2969,2973..2975,3003..3008)
                     /gene="LOC139839589"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270731"
     misc_feature    order(2613..2615,2835..2837,2841..2843,2952..2954,
                     2958..2960,2964..2966,3015..3017,3153..3170,3249..3251,
                     3267..3269,3276..3278)
                     /gene="LOC139839589"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270731"
     misc_feature    order(3003..3035,3144..3170)
                     /gene="LOC139839589"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270731"
ORIGIN      
        1 aaatacaaag cttattcatc atcttcataa ttaacaatta acaattaaca atggtgttca
       61 aaggtagatt cttctcttca aagaaatcat caggtacttc aagtcctgaa ggatcaaaca
      121 gtcctcgatc aagcggatca aactcaaatt caccaattaa atccgataaa aagaaaccta
      181 aatcaaaagc cgatcatcat ccaccaatcg cagcagccac tacctcctca tttcgtcaaa
      241 ctcaagtcaa agatgcatct tcaacttcaa catcaacttc atcttcaaat tcacaaattc
      301 cagttagcag cagtacaaaa cctaatttga atcgaaaacc tgcaccggca gtttccccaa
      361 ttttagcatc gtcacttgga ttgaatcgga ttaagactag atccggcccg ttgccacaag
      421 agagcttttt agacttcaat agtagtaata atggtaagat tggggctagt aatctttcta
      481 aatcgaaaaa tagttcgggt agtgatggaa gtagtttggg tgataagaag aagaagatgg
      541 cttttgagaa tggtgctgac aaaaatgtga atagttcaga tggcaaggct aaaaccagct
      601 taagagatca gacacctaat gttatcggcc gctcaccgtt acgaaatgga gagtcgtcat
      661 cagaagctgc tgggcgcatg aagtcaaggg gttattctgg aaacttgagg agttctgata
      721 tgttgactcc agagatgaag acatcatatg attgtgagaa ccctaaggaa tctgaatctc
      781 cccggtttca agcaatactc cgggttacaa gtgcacctag aaagagatat cctaatgaca
      841 tcaaaagctt ctcacatgag ttgaactcaa aaggcgtacg ccctttccct cattggaagc
      901 cacgtggtac aaataacgta gaggaggttt tatcaatgat acgggccaag ttcgacaaag
      961 caaaagaaga agtagatgtt gatttgcata tattggccgg agatttgctc ggaattttgg
     1021 agaaaaatgc tgaaagtcaa ccacaatggc aggaaaattt agaggatctg ctggtattgg
     1081 cgcagaggtg tgcgatgaca tcacctggcg agttttggtt gcagtgtgaa ggcattgttc
     1141 aagaactcga tgataaacgc caggagcttc ccatgggtat tataaagcaa cttcatactc
     1201 gtatgctttt catactaaca agatgcaccc gtttgctaca atttcacaaa gaaagcggat
     1261 tggctgaaga tgaacttgtt cttcaacttc gccaatcgct gcattcatct gataaactta
     1321 tatctggtgc ttcaaaaccc tcaaaaccac cttcaagtag gaaatttttt agtgaggaac
     1381 aacatggcct gcctgggttg gatttgaaga aagaaaaatc tgtaaaacct gaaaaaatgc
     1441 tgaccccgtc tcctttagaa acaacaagaa acttagactc cccatcgggt agagatagaa
     1501 tggcatcttg gaagaaattt ccatctccag ggggaaaaag ccccacagaa gaagttttgg
     1561 taaaagagat gggcgataat aaggtgggcc aggtggctag aaatgttgat ttgactacta
     1621 tgaagccttc tgaacaaata aaagatccaa atgtacaaac tagcactcct tataagcatc
     1681 agcatcgtgt ttcatgggga tggggggatc aaccgaatat tgacgatgaa agttcgataa
     1741 tttgtcggat ttgtgaggag gaggttccta cattacaggt ggaagatcat tctagagttt
     1801 gtgcaattgc tgatcgatgt gatcaaacgg gtctacgtgt agatgaacgg cttgttagag
     1861 ttgctgaaac cctagaaaag ttaatggatt cgatctcaca aaaggattat cagcatgttg
     1921 ttagaagccc agatggtact aaagtatcaa attatagtgt tactgaagag tttgataata
     1981 acatgtctcc aaagctaagt gatttgtctc gaagaggttc agaagacatg cttgactgtt
     2041 taccggataa ttctgtttca atggaggatc ttaaaggtat gccatcgatg tcatgcagga
     2101 cccgttttgg tcccaagtct gatcaaggaa tgacgacatc atctgctggt agtatgactc
     2161 ctaggtcgcc aatgatgaca cctcgaacca gccaaataga tttattattg tctgggaaga
     2221 gtgcttactc ggaacatggt gaccttcccc agataagtga actagctgat attgctcgat
     2281 gtgctggaaa tacacccttg aatgatgatc gctccttgtc atatttgtta acctgtcttg
     2341 atgatctgag ggttgtcgtt gaccgcagaa aatttgatgc cctcactgtt gaaacttttg
     2401 gagcacgcat agagaagctt atacgggaga agtatttgca gctttgtgag atggttgatg
     2461 atgaaaaagt cgatatcaca agtactgtta tcgatgaaga tgctccgttg gaggatgatg
     2521 ttgtacgcag tctgaggaca agccctatgc attcagggaa agaccgcact tcaatagatg
     2581 actttgaaat tataaaacca attagtcgtg gagcatttgg tcgggttttt ttggcgaaaa
     2641 aaagaacgac aggggatctt tttgctataa aggtcctaaa gaaggcttgc atgattcgaa
     2701 agaatgctgt tgagagtata ttggcagagc gtgatatctt gatatcagtc cgaaatcctt
     2761 ttgtggttcg ttttttctat tcatttacat gccgtgaaaa cttgtacctt gtgatggagt
     2821 acttgaatgg tggtgattta tattccttat tgagaaatct aggctgcttg gatgaagacg
     2881 ttgctcgtat atacattgca gaagtggttc ttgctttgga atatttacat tctctacgtg
     2941 tggttcaccg cgatttaaaa ccagacaatt tattgatcgc acatgatggt catattaagt
     3001 taacagattt tgggctatca aaggttggtc ttattgacag tacagacgat ttgtctgggc
     3061 cagcaatgag tggcacgtca ttattgggag agaacgcatc tcaatctcaa tcattatctg
     3121 aaagtcagca agaaatacgt aaaaaccgat ctgctgttgg tacccctgac tatttggccc
     3181 ctgaaattct tcttggaact ggacacggta catcagcgga ttggtggtct gttggcgtaa
     3241 tactatttga gctgattgtc ggtattcctc cttttaatgc agagcaccct cagatgatat
     3301 ttgataacat tttgaaccgt aacataccct ggcctgctgt gcccgatgaa atgagccctg
     3361 atgcacagga tctcattgat caattattga cagaagatcc taaccaaaga cttggagcta
     3421 ggggagcaac cgaggttaag cagcacccat attttaggga tattaactgg gatacactag
     3481 ccaggcaaaa ggctgcattt atcccttcat cagagagtgc actagacact agctatttca
     3541 caagtcggta cacatggagt aactcagaac aggtgtatgc agccagcgat atagaaaatt
     3601 ctagtgacga tggaagcatg agtagcagta gttgcataag ccatcacaat gaggaagtgg
     3661 ctgatgattt tgggggtctt agtgaacttg atccaggata tgctgtcaac tactctttta
     3721 gtaacttctc cttcaagaat ctatcacaac tcgcatcaat caactatgat ttgcttacta
     3781 aaggcttgaa ggatgataca tctacaaatc caaatgtata gtaaacctgg atctcctttt
     3841 caaagacaac aagtgcttgt cagctacgct gaatgtatat actgtaaata tgtagaggta
     3901 actgaaatga gagaactcat agtcataggg atggtttaag attttcatac atgttctaat
     3961 gttgtgcgaa tgggcagcag gttactgata tagtcgtagc acggctgact ttctgggcaa
     4021 ctttttatgt ctcacagata aattgcattc atcatcagct ttggtaacgt gtgttatcga
     4081 agttctcctt gtatcagtga agtttctgtt attaccagct attgttgtaa acttgtaata
     4141 gctgaaattt cgtgttatct gtatgttctt aatttaactt cttgacattt gtttcatgag
     4201 ttctgaattg gtttctctgc tttcctcttc gaacataatt ttacatctgg ctttcagctt
     4261 cagtttgaat agtcaacttc aattcagcta atgtagaaac tttgagttta
//
LOCUS       XM_071829691            4304 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable serine/threonine
            protein kinase IREH1 (LOC139839589), transcript variant X2, mRNA.
ACCESSION   XM_071829691
VERSION     XM_071829691.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4304
                     /gene="LOC139839589"
                     /note="probable serine/threonine protein kinase IREH1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 24 Proteins"
                     /db_xref="GeneID:139839589"
     CDS             51..3821
                     /gene="LOC139839589"
                     /codon_start=1
                     /product="probable serine/threonine protein kinase IREH1"
                     /protein_id="XP_071685792.1"
                     /db_xref="GeneID:139839589"
                     /translation="MVFKGRFFSSKKSSGTSSPEGSNSPRSSGSNSNSPIKSDKKKPK
                     SKADHHPPIAAATTSSFRQTQVKDASSTSTSTSSSNSQIPVSSSTKPNLNRKPAPAVS
                     PILASSLGLNRIKTRSGPLPQESFLDFNSSNNGKIGASNLSKSKNSSGSDGSSLGDKK
                     KKMAFENGADKNVNSSDGKAKTSLRDQTPNVIGRSPLRNGESSSEAAGRMKSRGYSGN
                     LRSSDMLTPEMKTSYDCENPKESESPRFQAILRVTSAPRKRYPNDIKSFSHELNSKGV
                     RPFPHWKPRGTNNVEEVLSMIRAKFDKAKEEVDVDLHILAGDLLGILEKNAESQPQWQ
                     ENLEDLLVLAQRCAMTSPGEFWLQCEGIVQELDDKRQELPMGIIKQLHTRMLFILTRC
                     TRLLQFHKESGLAEDELVLQLRQSLHSSDKLISGASKPSKPPSSRKFFSEEQHGLPGL
                     DLKKEKSVKPEKMLTPSPLETTRNLDSPSGRDRMASWKKFPSPGGKSPTEEVLVKEMG
                     DNKVGQVARNVDLTTMKPSEQIKDPNVQTSTPYKHQHRVSWGWGDQPNIDDESSIICR
                     ICEEEVPTLQVEDHSRVCAIADRCDQTGLRVDERLVRVAETLEKLMDSISQKDYQHVV
                     RSPDGTKVSNYSVTEEFDNNMSPKLSDLSRRGSEDMLDCLPDNSVSMEDLKGMPSMSC
                     RTRFGPKSDQGMTTSSAGSMTPRSPMMTPRTSQIDLLLSGKSAYSEHGDLPQISELAD
                     IARCAGNTPLNDDRSLSYLLTCLDDLRVVVDRRKFDALTVETFGARIEKLIREKYLQL
                     CEMVDDEKVDITSTVIDEDAPLEDDVVRSLRTSPMHSGKDRTSIDDFEIIKPISRGAF
                     GRVFLAKKRTTGDLFAIKVLKKACMIRKNAVESILAERDILISVRNPFVVRFFYSFTC
                     RENLYLVMEYLNGGDLYSLLRNLGCLDEDVARIYIAEVVLALEYLHSLRVVHRDLKPD
                     NLLIAHDGHIKLTDFGLSKVGLIDSTDDLSGPAMSGTSLLGENASQSQSLSESQQEIR
                     KNRSAVGTPDYLAPEILLGTGHGTSADWWSVGVILFELIVGIPPFNAEHPQMIFDNIL
                     NRNIPWPAVPDEMSPDAQDLIDQLLTEDPNQRLGARGATEVKQHPYFRDINWDTLARQ
                     KAAFIPSSESALDTSYFTSRYTWSNSEQVYAASDIENSSDDGSMSSSSCISHHNEEVA
                     DDFGGLSELDPGYAVNYSFSNFSFKNLSQLASINYDLLTKGLKDDTSTNPNV"
     misc_feature    2601..3470
                     /gene="LOC139839589"
                     /note="Catalytic domain of Microtubule-associated
                     serine/threonine (MAST) kinase-like proteins; Region:
                     STKc_MAST_like; cd05579"
                     /db_xref="CDD:270731"
     misc_feature    order(2601..2615,2625..2627,2664..2666,2670..2672,
                     2766..2768,2814..2819,2823..2825,2835..2837,2841..2843,
                     2952..2954,2958..2960,2964..2969,2973..2975,3003..3008,
                     3015..3017,3153..3170,3249..3251,3267..3269,3276..3278)
                     /gene="LOC139839589"
                     /note="active site"
                     /db_xref="CDD:270731"
     misc_feature    order(2601..2615,2625..2627,2664..2666,2670..2672,
                     2766..2768,2817..2825,2835..2837,2952..2954,2958..2960,
                     2964..2969,2973..2975,3003..3008)
                     /gene="LOC139839589"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270731"
     misc_feature    order(2613..2615,2835..2837,2841..2843,2952..2954,
                     2958..2960,2964..2966,3015..3017,3153..3170,3249..3251,
                     3267..3269,3276..3278)
                     /gene="LOC139839589"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270731"
     misc_feature    order(3003..3035,3144..3170)
                     /gene="LOC139839589"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270731"
ORIGIN      
        1 aaatacaaag cttattcatc atcttcataa ttaacaatta acaattaaca atggtgttca
       61 aaggtagatt cttctcttca aagaaatcat caggtacttc aagtcctgaa ggatcaaaca
      121 gtcctcgatc aagcggatca aactcaaatt caccaattaa atccgataaa aagaaaccta
      181 aatcaaaagc cgatcatcat ccaccaatcg cagcagccac tacctcctca tttcgtcaaa
      241 ctcaagtcaa agatgcatct tcaacttcaa catcaacttc atcttcaaat tcacaaattc
      301 cagttagcag cagtacaaaa cctaatttga atcgaaaacc tgcaccggca gtttccccaa
      361 ttttagcatc gtcacttgga ttgaatcgga ttaagactag atccggcccg ttgccacaag
      421 agagcttttt agacttcaat agtagtaata atggtaagat tggggctagt aatctttcta
      481 aatcgaaaaa tagttcgggt agtgatggaa gtagtttggg tgataagaag aagaagatgg
      541 cttttgagaa tggtgctgac aaaaatgtga atagttcaga tggcaaggct aaaaccagct
      601 taagagatca gacacctaat gttatcggcc gctcaccgtt acgaaatgga gagtcgtcat
      661 cagaagctgc tgggcgcatg aagtcaaggg gttattctgg aaacttgagg agttctgata
      721 tgttgactcc agagatgaag acatcatatg attgtgagaa ccctaaggaa tctgaatctc
      781 cccggtttca agcaatactc cgggttacaa gtgcacctag aaagagatat cctaatgaca
      841 tcaaaagctt ctcacatgag ttgaactcaa aaggcgtacg ccctttccct cattggaagc
      901 cacgtggtac aaataacgta gaggaggttt tatcaatgat acgggccaag ttcgacaaag
      961 caaaagaaga agtagatgtt gatttgcata tattggccgg agatttgctc ggaattttgg
     1021 agaaaaatgc tgaaagtcaa ccacaatggc aggaaaattt agaggatctg ctggtattgg
     1081 cgcagaggtg tgcgatgaca tcacctggcg agttttggtt gcagtgtgaa ggcattgttc
     1141 aagaactcga tgataaacgc caggagcttc ccatgggtat tataaagcaa cttcatactc
     1201 gtatgctttt catactaaca agatgcaccc gtttgctaca atttcacaaa gaaagcggat
     1261 tggctgaaga tgaacttgtt cttcaacttc gccaatcgct gcattcatct gataaactta
     1321 tatctggtgc ttcaaaaccc tcaaaaccac cttcaagtag gaaatttttt agtgaggaac
     1381 aacatggcct gcctgggttg gatttgaaga aagaaaaatc tgtaaaacct gaaaaaatgc
     1441 tgaccccgtc tcctttagaa acaacaagaa acttagactc cccatcgggt agagatagaa
     1501 tggcatcttg gaagaaattt ccatctccag ggggaaaaag ccccacagaa gaagttttgg
     1561 taaaagagat gggcgataat aaggtgggcc aggtggctag aaatgttgat ttgactacta
     1621 tgaagccttc tgaacaaata aaagatccaa atgtacaaac tagcactcct tataagcatc
     1681 agcatcgtgt ttcatgggga tggggggatc aaccgaatat tgacgatgaa agttcgataa
     1741 tttgtcggat ttgtgaggag gaggttccta cattacaggt ggaagatcat tctagagttt
     1801 gtgcaattgc tgatcgatgt gatcaaacgg gtctacgtgt agatgaacgg cttgttagag
     1861 ttgctgaaac cctagaaaag ttaatggatt cgatctcaca aaaggattat cagcatgttg
     1921 ttagaagccc agatggtact aaagtatcaa attatagtgt tactgaagag tttgataata
     1981 acatgtctcc aaagctaagt gatttgtctc gaagaggttc agaagacatg cttgactgtt
     2041 taccggataa ttctgtttca atggaggatc ttaaaggtat gccatcgatg tcatgcagga
     2101 cccgttttgg tcccaagtct gatcaaggaa tgacgacatc atctgctggt agtatgactc
     2161 ctaggtcgcc aatgatgaca cctcgaacca gccaaataga tttattattg tctgggaaga
     2221 gtgcttactc ggaacatggt gaccttcccc agataagtga actagctgat attgctcgat
     2281 gtgctggaaa tacacccttg aatgatgatc gctccttgtc atatttgtta acctgtcttg
     2341 atgatctgag ggttgtcgtt gaccgcagaa aatttgatgc cctcactgtt gaaacttttg
     2401 gagcacgcat agagaagctt atacgggaga agtatttgca gctttgtgag atggttgatg
     2461 atgaaaaagt cgatatcaca agtactgtta tcgatgaaga tgctccgttg gaggatgatg
     2521 ttgtacgcag tctgaggaca agccctatgc attcagggaa agaccgcact tcaatagatg
     2581 actttgaaat tataaaacca attagtcgtg gagcatttgg tcgggttttt ttggcgaaaa
     2641 aaagaacgac aggggatctt tttgctataa aggtcctaaa gaaggcttgc atgattcgaa
     2701 agaatgctgt tgagagtata ttggcagagc gtgatatctt gatatcagtc cgaaatcctt
     2761 ttgtggttcg ttttttctat tcatttacat gccgtgaaaa cttgtacctt gtgatggagt
     2821 acttgaatgg tggtgattta tattccttat tgagaaatct aggctgcttg gatgaagacg
     2881 ttgctcgtat atacattgca gaagtggttc ttgctttgga atatttacat tctctacgtg
     2941 tggttcaccg cgatttaaaa ccagacaatt tattgatcgc acatgatggt catattaagt
     3001 taacagattt tgggctatca aaggttggtc ttattgacag tacagacgat ttgtctgggc
     3061 cagcaatgag tggcacgtca ttattgggag agaacgcatc tcaatctcaa tcattatctg
     3121 aaagtcagca agaaatacgt aaaaaccgat ctgctgttgg tacccctgac tatttggccc
     3181 ctgaaattct tcttggaact ggacacggta catcagcgga ttggtggtct gttggcgtaa
     3241 tactatttga gctgattgtc ggtattcctc cttttaatgc agagcaccct cagatgatat
     3301 ttgataacat tttgaaccgt aacataccct ggcctgctgt gcccgatgaa atgagccctg
     3361 atgcacagga tctcattgat caattattga cagaagatcc taaccaaaga cttggagcta
     3421 ggggagcaac cgaggttaag cagcacccat attttaggga tattaactgg gatacactag
     3481 ccaggcaaaa ggctgcattt atcccttcat cagagagtgc actagacact agctatttca
     3541 caagtcggta cacatggagt aactcagaac aggtgtatgc agccagcgat atagaaaatt
     3601 ctagtgacga tggaagcatg agtagcagta gttgcataag ccatcacaat gaggaagtgg
     3661 ctgatgattt tgggggtctt agtgaacttg atccaggata tgctgtcaac tactctttta
     3721 gtaacttctc cttcaagaat ctatcacaac tcgcatcaat caactatgat ttgcttacta
     3781 aaggcttgaa ggatgataca tctacaaatc caaatgtata gtaaacctgg atctcctttt
     3841 caaagacaac aagtgcttgt cagctacgct gaatgtatat actgtaaata ggtaactgaa
     3901 atgagagaac tcatagtcat agggatggtt taagattttc atacatgttc taatgttgtg
     3961 cgaatgggca gcaggttact gatatagtcg tagcacggct gactttctgg gcaacttttt
     4021 atgtctcaca gataaattgc attcatcatc agctttggta acgtgtgtta tcgaagttct
     4081 ccttgtatca gtgaagtttc tgttattacc agctattgtt gtaaacttgt aatagctgaa
     4141 atttcgtgtt atctgtatgt tcttaattta acttcttgac atttgtttca tgagttctga
     4201 attggtttct ctgctttcct cttcgaacat aattttacat ctggctttca gcttcagttt
     4261 gaatagtcaa cttcaattca gctaatgtag aaactttgag ttta
//
LOCUS       XM_071829692            2993 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear poly(A) polymerase
            1-like (LOC139839590), transcript variant X1, mRNA.
ACCESSION   XM_071829692
VERSION     XM_071829692.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2993
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2993
                     /gene="LOC139839590"
                     /note="nuclear poly(A) polymerase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 Proteins"
                     /db_xref="GeneID:139839590"
     CDS             562..2631
                     /gene="LOC139839590"
                     /codon_start=1
                     /product="nuclear poly(A) polymerase 1-like isoform X1"
                     /protein_id="XP_071685793.1"
                     /db_xref="GeneID:139839590"
                     /translation="MGSQGFNYQNNGQRLGITEPISLGGPSEYDVIKTNELEQFLADA
                     GLYESHEEAISREEVLGRLDQIVKIWVKKVSRARGLNEQLVQEANAKIFTFGSYRLGV
                     HGPGADIDTLCVGPRYADRLEDFFGELKRMLIEMPDVTDMHPVPDAHVPVMNFKLNGV
                     SIDLLYAKISLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQSFRT
                     TLRCMRFWATRRGVYSNVTGFLGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWR
                     WPNPVMLCAIKEGSLGLPIWDPRRNHKDKFHLMPIITPAYPSMNSSYNVSSSTLRIMT
                     DEFKRGHDICEAMVLNNGSWVELFEPYRFFEAYKNYLQIDIGAENDDDMLNWKGWVKS
                     RLRYIVLKIERDTFKMLQCHPHPGDFSDGSNPSHCSYFLGLQRKENVPVNDAKKFDIR
                     LTIAEFKDNVRSYSLWKPGMNINVTHIKCRDIPAFVFPGGIRPSRPTRVSVDSGTSVD
                     VNVVDGFNDDTRKRKRDDDDVLTKSTVPRLVIADGLENNGVSVGKVNNDEIGGPVTSR
                     DAEKLATEKLMSGPYESEQRVPQDFEELEELDNSNIQNRYIGETTKGIDVESFTTKEV
                     ATSKMMKNASDTSSCLQLNGSLEELEPPELDLPLPRAIHSTAASQNKPILRFSFTSLP
                     KATGNSS"
     misc_feature    607..1641
                     /gene="LOC139839590"
                     /note="Poly(A) polymerase central domain; Region:
                     PAP_central; pfam04928"
                     /db_xref="CDD:461486"
     misc_feature    1648..2040
                     /gene="LOC139839590"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     Region: PAP_RNA-bind; pfam04926"
                     /db_xref="CDD:461484"
     polyA_site      2993
                     /gene="LOC139839590"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatttggctg tttatccttc cctccgttct ccgacgtcaa ctcgctggac gaaatcggaa
       61 tttagctggt cggtgtcgtt ttctgcactt taattgtcac agattatagc cttatagaat
      121 taaatcgttg ctcaattgtt atctcgaaga gctacaacag attgctcgaa atgaagccaa
      181 ttgttgatca cttgtaatct ggtggtttct gctgataccg tacagttagg gtttgcttat
      241 caaaattaga tatcatatga gtataaattt aaaagaagcg ttatttagct aggttttgtt
      301 ttgttgtggt gtctgattat aagattttga aagtttttct ttataatcag tttctgattg
      361 tagaattcat attcatatac tgtactaata agtatgatca tatacattat gaagcttttt
      421 tgatttcttt ttgtgttttt atgtgttcct ggttaaaatt gaggggggat atttcaagta
      481 actatctata attttgttca tagctgacta aatttttttt cttttacaag tgttttttgt
      541 ttttaaaatt ttgaccaaga tatgggtagc caaggattta attatcagaa taatgggcaa
      601 agattgggca tcacagagcc tatatctttg ggtggaccaa gcgagtatga tgttatcaag
      661 acaaacgagc ttgaacagtt tttggcggat gccggactat atgagagtca tgaagaagcc
      721 ataagcaggg aagaagtttt aggacggctg gaccagattg tgaaaatctg ggtgaaaaag
      781 gttagccggg cgagggggtt aaacgaacag ctggttcagg aagcaaatgc caaaattttc
      841 accttcgggt cctaccgtct tggggtgcat ggacctggtg cagatatcga tacactctgt
      901 gttggaccca gatatgcaga tcgtcttgaa gatttttttg gtgagcttaa aagaatgctc
      961 atagagatgc ctgatgtaac agatatgcat cctgtacccg atgctcatgt tcccgtaatg
     1021 aatttcaagt tgaatggggt ttcaattgat cttctttatg caaaaatttc actttgggtt
     1081 atacctgaag atttggatat ttctcaagac tcaatactgc aaaatgcgga tgagcagaca
     1141 gttcgaagtc ttaatgggtg cagagttact gaccagatcc tgcgtctagt gcctaatatt
     1201 cagagttttc ggacaacatt aaggtgcatg aggttttggg ccactcgacg aggagtttac
     1261 tcaaacgtta ctggattttt aggtggcata aactgggcgt tgcttgttgc acgcatttgc
     1321 caattgtatc ctaatgcact gcccaatatg cttgtttctc gattcttcag ggtctacact
     1381 caatggagat ggccgaatcc agtaatgctc tgtgctataa aggaaggatc gcttggattg
     1441 ccaatttggg atccaagaag aaaccacaag gataaatttc acttaatgcc gattattact
     1501 cctgcatatc ctagtatgaa ctctagctac aatgtgtcat cgagtacttt acggataatg
     1561 actgatgaat tcaagagagg tcatgatata tgtgaggcga tggtgttaaa taatggtagt
     1621 tgggttgaac tttttgagcc ctatcgtttc tttgaagcat ataagaatta tctacagata
     1681 gatataggtg cagagaatga tgatgatatg ctgaactgga aaggctgggt taaatctcgc
     1741 ttacgttaca ttgtacttaa gattgagaga gacaccttca aaatgctgca atgccaccca
     1801 catccagggg acttttcgga cgggtcaaac ccgtctcact gtagttattt tttaggtctt
     1861 caacgaaaag agaatgttcc tgtgaatgat gccaagaagt ttgatatacg attgacgatt
     1921 gctgagttta aagataatgt tagatcatat tcgttatgga agcctggaat gaacataaac
     1981 gtaacccata taaaatgtag agatattccc gcttttgttt ttcctggtgg tattcgacct
     2041 tcacggccca ctagagtaag tgtggattca ggaacttcag ttgatgttaa tgttgttgac
     2101 ggttttaacg atgacacaag gaaacggaaa cgagacgatg atgatgtgtt gaccaagtca
     2161 accgttccca gactcgtaat agccgatggc ctagaaaata acggcgttag tgtgggcaag
     2221 gtgaacaatg atgaaatcgg tggtccagtc acctctagag atgctgagaa gcttgcaacc
     2281 gaaaagttaa tgtccggtcc ttatgaatct gaacagaggg tcccacaaga ctttgaggag
     2341 ctagaagaac ttgataatag taatattcaa aatagatata taggcgagac tacaaaagga
     2401 attgacgtgg aatctttcac gactaaagaa gtagctactt ctaaaatgat gaaaaatgca
     2461 tcagacacct catcctgttt gcagttgaat gggagcttag aggagcttga gccccctgaa
     2521 cttgacctac ccttgccaag ggcgattcat tctacagctg cttcacagaa taaaccgatt
     2581 ctcaggttta gctttacttc attgcccaag gctaccggta atagttctta gaagacgtac
     2641 gtgatcaggg ttgtctttag tatacacaag tagaatgtca atggtcatct gagtatccac
     2701 ccgatccacc catttagtgg tgaatatgaa tgatctaaat ggatatataa caatcattat
     2761 ggatatatat gtggatgatt agtggttgga atgaggatga cgatcgatca tccatggatc
     2821 tatcgactct cactcaatac attttatata caatgattat tttggtatat gcaataatac
     2881 atttacatgt caacgtacat atatattact gtataaaagt attaaattgt tatcgaacgt
     2941 acaggtggtt gtaatataat tatgcggata tttataattt ttgtttgagt tta
//
LOCUS       XM_071829693            2828 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear poly(A) polymerase
            1-like (LOC139839590), transcript variant X2, mRNA.
ACCESSION   XM_071829693
VERSION     XM_071829693.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2828
                     /gene="LOC139839590"
                     /note="nuclear poly(A) polymerase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839590"
     CDS             562..2466
                     /gene="LOC139839590"
                     /codon_start=1
                     /product="nuclear poly(A) polymerase 1-like isoform X2"
                     /protein_id="XP_071685794.1"
                     /db_xref="GeneID:139839590"
                     /translation="MGSQGFNYQNNGQRLGITEPISLGGPSEYDVIKTNELEQFLADA
                     GLYESHEEAISREEVLGRLDQIVKIWVKKVSRARGLNEQLVQEANAKIFTFGSYRLGV
                     HGPGADIDTLCVGPRYADRLEDFFGELKRMLIEMPDVTDMHPVPDAHVPVMNFKLNGV
                     SIDLLYAKISLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQSFRT
                     TLRCMRFWATRRGVYSNVTGFLGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWR
                     WPNPVMLCAIKEGSLGLPIWDPRRNHKDKFHLMPIITPAYPSMNSSYNVSSSTLRIMT
                     DEFKRGHDICEIERDTFKMLQCHPHPGDFSDGSNPSHCSYFLGLQRKENVPVNDAKKF
                     DIRLTIAEFKDNVRSYSLWKPGMNINVTHIKCRDIPAFVFPGGIRPSRPTRVSVDSGT
                     SVDVNVVDGFNDDTRKRKRDDDDVLTKSTVPRLVIADGLENNGVSVGKVNNDEIGGPV
                     TSRDAEKLATEKLMSGPYESEQRVPQDFEELEELDNSNIQNRYIGETTKGIDVESFTT
                     KEVATSKMMKNASDTSSCLQLNGSLEELEPPELDLPLPRAIHSTAASQNKPILRFSFT
                     SLPKATGNSS"
     misc_feature    607..1602
                     /gene="LOC139839590"
                     /note="Poly(A) polymerase central domain; Region:
                     PAP_central; pfam04928"
                     /db_xref="CDD:461486"
     misc_feature    <1675..1875
                     /gene="LOC139839590"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     Region: PAP_RNA-bind; pfam04926"
                     /db_xref="CDD:461484"
     polyA_site      2828
                     /gene="LOC139839590"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatttggctg tttatccttc cctccgttct ccgacgtcaa ctcgctggac gaaatcggaa
       61 tttagctggt cggtgtcgtt ttctgcactt taattgtcac agattatagc cttatagaat
      121 taaatcgttg ctcaattgtt atctcgaaga gctacaacag attgctcgaa atgaagccaa
      181 ttgttgatca cttgtaatct ggtggtttct gctgataccg tacagttagg gtttgcttat
      241 caaaattaga tatcatatga gtataaattt aaaagaagcg ttatttagct aggttttgtt
      301 ttgttgtggt gtctgattat aagattttga aagtttttct ttataatcag tttctgattg
      361 tagaattcat attcatatac tgtactaata agtatgatca tatacattat gaagcttttt
      421 tgatttcttt ttgtgttttt atgtgttcct ggttaaaatt gaggggggat atttcaagta
      481 actatctata attttgttca tagctgacta aatttttttt cttttacaag tgttttttgt
      541 ttttaaaatt ttgaccaaga tatgggtagc caaggattta attatcagaa taatgggcaa
      601 agattgggca tcacagagcc tatatctttg ggtggaccaa gcgagtatga tgttatcaag
      661 acaaacgagc ttgaacagtt tttggcggat gccggactat atgagagtca tgaagaagcc
      721 ataagcaggg aagaagtttt aggacggctg gaccagattg tgaaaatctg ggtgaaaaag
      781 gttagccggg cgagggggtt aaacgaacag ctggttcagg aagcaaatgc caaaattttc
      841 accttcgggt cctaccgtct tggggtgcat ggacctggtg cagatatcga tacactctgt
      901 gttggaccca gatatgcaga tcgtcttgaa gatttttttg gtgagcttaa aagaatgctc
      961 atagagatgc ctgatgtaac agatatgcat cctgtacccg atgctcatgt tcccgtaatg
     1021 aatttcaagt tgaatggggt ttcaattgat cttctttatg caaaaatttc actttgggtt
     1081 atacctgaag atttggatat ttctcaagac tcaatactgc aaaatgcgga tgagcagaca
     1141 gttcgaagtc ttaatgggtg cagagttact gaccagatcc tgcgtctagt gcctaatatt
     1201 cagagttttc ggacaacatt aaggtgcatg aggttttggg ccactcgacg aggagtttac
     1261 tcaaacgtta ctggattttt aggtggcata aactgggcgt tgcttgttgc acgcatttgc
     1321 caattgtatc ctaatgcact gcccaatatg cttgtttctc gattcttcag ggtctacact
     1381 caatggagat ggccgaatcc agtaatgctc tgtgctataa aggaaggatc gcttggattg
     1441 ccaatttggg atccaagaag aaaccacaag gataaatttc acttaatgcc gattattact
     1501 cctgcatatc ctagtatgaa ctctagctac aatgtgtcat cgagtacttt acggataatg
     1561 actgatgaat tcaagagagg tcatgatata tgtgagattg agagagacac cttcaaaatg
     1621 ctgcaatgcc acccacatcc aggggacttt tcggacgggt caaacccgtc tcactgtagt
     1681 tattttttag gtcttcaacg aaaagagaat gttcctgtga atgatgccaa gaagtttgat
     1741 atacgattga cgattgctga gtttaaagat aatgttagat catattcgtt atggaagcct
     1801 ggaatgaaca taaacgtaac ccatataaaa tgtagagata ttcccgcttt tgtttttcct
     1861 ggtggtattc gaccttcacg gcccactaga gtaagtgtgg attcaggaac ttcagttgat
     1921 gttaatgttg ttgacggttt taacgatgac acaaggaaac ggaaacgaga cgatgatgat
     1981 gtgttgacca agtcaaccgt tcccagactc gtaatagccg atggcctaga aaataacggc
     2041 gttagtgtgg gcaaggtgaa caatgatgaa atcggtggtc cagtcacctc tagagatgct
     2101 gagaagcttg caaccgaaaa gttaatgtcc ggtccttatg aatctgaaca gagggtccca
     2161 caagactttg aggagctaga agaacttgat aatagtaata ttcaaaatag atatataggc
     2221 gagactacaa aaggaattga cgtggaatct ttcacgacta aagaagtagc tacttctaaa
     2281 atgatgaaaa atgcatcaga cacctcatcc tgtttgcagt tgaatgggag cttagaggag
     2341 cttgagcccc ctgaacttga cctacccttg ccaagggcga ttcattctac agctgcttca
     2401 cagaataaac cgattctcag gtttagcttt acttcattgc ccaaggctac cggtaatagt
     2461 tcttagaaga cgtacgtgat cagggttgtc tttagtatac acaagtagaa tgtcaatggt
     2521 catctgagta tccacccgat ccacccattt agtggtgaat atgaatgatc taaatggata
     2581 tataacaatc attatggata tatatgtgga tgattagtgg ttggaatgag gatgacgatc
     2641 gatcatccat ggatctatcg actctcactc aatacatttt atatacaatg attattttgg
     2701 tatatgcaat aatacattta catgtcaacg tacatatata ttactgtata aaagtattaa
     2761 attgttatcg aacgtacagg tggttgtaat ataattatgc ggatatttat aatttttgtt
     2821 tgagttta
//
LOCUS       XM_071829694            2109 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear poly(A) polymerase
            1-like (LOC139839590), transcript variant X3, mRNA.
ACCESSION   XM_071829694
VERSION     XM_071829694.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2109
                     /gene="LOC139839590"
                     /note="nuclear poly(A) polymerase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839590"
     CDS             71..1747
                     /gene="LOC139839590"
                     /codon_start=1
                     /product="nuclear poly(A) polymerase 1-like isoform X3"
                     /protein_id="XP_071685795.1"
                     /db_xref="GeneID:139839590"
                     /translation="MLIEMPDVTDMHPVPDAHVPVMNFKLNGVSIDLLYAKISLWVIP
                     EDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQSFRTTLRCMRFWATRRGVY
                     SNVTGFLGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIKEGSL
                     GLPIWDPRRNHKDKFHLMPIITPAYPSMNSSYNVSSSTLRIMTDEFKRGHDICEAMVL
                     NNGSWVELFEPYRFFEAYKNYLQIDIGAENDDDMLNWKGWVKSRLRYIVLKIERDTFK
                     MLQCHPHPGDFSDGSNPSHCSYFLGLQRKENVPVNDAKKFDIRLTIAEFKDNVRSYSL
                     WKPGMNINVTHIKCRDIPAFVFPGGIRPSRPTRVSVDSGTSVDVNVVDGFNDDTRKRK
                     RDDDDVLTKSTVPRLVIADGLENNGVSVGKVNNDEIGGPVTSRDAEKLATEKLMSGPY
                     ESEQRVPQDFEELEELDNSNIQNRYIGETTKGIDVESFTTKEVATSKMMKNASDTSSC
                     LQLNGSLEELEPPELDLPLPRAIHSTAASQNKPILRFSFTSLPKATGNSS"
     misc_feature    <71..757
                     /gene="LOC139839590"
                     /note="Poly(A) polymerase central domain; Region:
                     PAP_central; pfam04928"
                     /db_xref="CDD:461486"
     misc_feature    764..1156
                     /gene="LOC139839590"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     Region: PAP_RNA-bind; pfam04926"
                     /db_xref="CDD:461484"
     polyA_site      2109
                     /gene="LOC139839590"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cagatatcga tacactctgt gttggaccca gatatgcaga tcgtcttatt tttttggtga
       61 gcttaaaaga atgctcatag agatgcctga tgtaacagat atgcatcctg tacccgatgc
      121 tcatgttccc gtaatgaatt tcaagttgaa tggggtttca attgatcttc tttatgcaaa
      181 aatttcactt tgggttatac ctgaagattt ggatatttct caagactcaa tactgcaaaa
      241 tgcggatgag cagacagttc gaagtcttaa tgggtgcaga gttactgacc agatcctgcg
      301 tctagtgcct aatattcaga gttttcggac aacattaagg tgcatgaggt tttgggccac
      361 tcgacgagga gtttactcaa acgttactgg atttttaggt ggcataaact gggcgttgct
      421 tgttgcacgc atttgccaat tgtatcctaa tgcactgccc aatatgcttg tttctcgatt
      481 cttcagggtc tacactcaat ggagatggcc gaatccagta atgctctgtg ctataaagga
      541 aggatcgctt ggattgccaa tttgggatcc aagaagaaac cacaaggata aatttcactt
      601 aatgccgatt attactcctg catatcctag tatgaactct agctacaatg tgtcatcgag
      661 tactttacgg ataatgactg atgaattcaa gagaggtcat gatatatgtg aggcgatggt
      721 gttaaataat ggtagttggg ttgaactttt tgagccctat cgtttctttg aagcatataa
      781 gaattatcta cagatagata taggtgcaga gaatgatgat gatatgctga actggaaagg
      841 ctgggttaaa tctcgcttac gttacattgt acttaagatt gagagagaca ccttcaaaat
      901 gctgcaatgc cacccacatc caggggactt ttcggacggg tcaaacccgt ctcactgtag
      961 ttatttttta ggtcttcaac gaaaagagaa tgttcctgtg aatgatgcca agaagtttga
     1021 tatacgattg acgattgctg agtttaaaga taatgttaga tcatattcgt tatggaagcc
     1081 tggaatgaac ataaacgtaa cccatataaa atgtagagat attcccgctt ttgtttttcc
     1141 tggtggtatt cgaccttcac ggcccactag agtaagtgtg gattcaggaa cttcagttga
     1201 tgttaatgtt gttgacggtt ttaacgatga cacaaggaaa cggaaacgag acgatgatga
     1261 tgtgttgacc aagtcaaccg ttcccagact cgtaatagcc gatggcctag aaaataacgg
     1321 cgttagtgtg ggcaaggtga acaatgatga aatcggtggt ccagtcacct ctagagatgc
     1381 tgagaagctt gcaaccgaaa agttaatgtc cggtccttat gaatctgaac agagggtccc
     1441 acaagacttt gaggagctag aagaacttga taatagtaat attcaaaata gatatatagg
     1501 cgagactaca aaaggaattg acgtggaatc tttcacgact aaagaagtag ctacttctaa
     1561 aatgatgaaa aatgcatcag acacctcatc ctgtttgcag ttgaatggga gcttagagga
     1621 gcttgagccc cctgaacttg acctaccctt gccaagggcg attcattcta cagctgcttc
     1681 acagaataaa ccgattctca ggtttagctt tacttcattg cccaaggcta ccggtaatag
     1741 ttcttagaag acgtacgtga tcagggttgt ctttagtata cacaagtaga atgtcaatgg
     1801 tcatctgagt atccacccga tccacccatt tagtggtgaa tatgaatgat ctaaatggat
     1861 atataacaat cattatggat atatatgtgg atgattagtg gttggaatga ggatgacgat
     1921 cgatcatcca tggatctatc gactctcact caatacattt tatatacaat gattattttg
     1981 gtatatgcaa taatacattt acatgtcaac gtacatatat attactgtat aaaagtatta
     2041 aattgttatc gaacgtacag gtggttgtaa tataattatg cggatattta taatttttgt
     2101 ttgagttta
//
LOCUS       XM_071829695            1050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides elongation factor
            1-delta-like (LOC139839592), mRNA.
ACCESSION   XM_071829695
VERSION     XM_071829695.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1050
                     /gene="LOC139839592"
                     /note="elongation factor 1-delta-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139839592"
     CDS             141..833
                     /gene="LOC139839592"
                     /codon_start=1
                     /product="elongation factor 1-delta-like"
                     /protein_id="XP_071685796.1"
                     /db_xref="GeneID:139839592"
                     /translation="MAPTFYVGSEAGLKKLDEYLLSRSYITGYQASKDDLTVHAAFTK
                     PPSPQYVNVSRWYNHITALLRISGVFAEGSGVVVDGSAYFPEEAIATPPVAETKGAVD
                     EDDDSDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMQKL
                     EEAVRSVQMEGLHWGASKLVPVGYGIKKLQIMMTIDDDLVSVDSLIEDKLMAEPINEY
                     VQSCDIVAFNKI"
     misc_feature    <165..329
                     /gene="LOC139839592"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; Region: GST_C_family; cl02776"
                     /db_xref="CDD:470672"
     misc_feature    555..830
                     /gene="LOC139839592"
                     /note="Elongation factor 1 beta (EF1B) guanine nucleotide
                     exchange domain. EF1B catalyzes the exchange of GDP bound
                     to the G-protein, EF1A, for GTP, an important step in the
                     elongation cycle of the protein biosynthesis. EF1A binds
                     to and delivers the aminoacyl...; Region: EF1B; cd00292"
                     /db_xref="CDD:238181"
     misc_feature    order(561..563,573..575,585..593,663..668,681..683,
                     690..692,714..716,720..722,729..731,738..740,747..752,
                     807..809,822..827)
                     /gene="LOC139839592"
                     /note="EF1A interaction surface [polypeptide binding];
                     other site"
                     /db_xref="CDD:238181"
     polyA_site      1050
                     /gene="LOC139839592"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caaaatgaca aatttaccct ctatcaccct tctaattata gatagacgat tctagtaggg
       61 tttttgatca ccattgccca atttacctct caactcaact cgcaaactgt aggcataaga
      121 gtttagttaa ttgcatacaa atggctccta cattttatgt tggttctgag gctgggctta
      181 aaaagcttga tgagtaccta ttgtcccgta gttacatcac cgggtatcaa gcttcgaagg
      241 atgacctcac tgttcatgca gctttcacaa aacctccatc accacaatat gtgaatgtat
      301 ctcgttggta taatcatatc accgctcttt taaggatctc tggtgtattc gctgaaggca
      361 gtggcgttgt tgttgacgga tccgcttatt tcccggagga ggctatcgca actccacccg
      421 ttgctgagac aaagggtgca gtagatgagg atgatgacag tgatgtggat ctctttggtg
      481 aggaaaccga ggaggaaaag aaggctgcgg aagaacgtgc tgctgcggtt aaggcatctg
      541 gaaagaagaa agaatctggt aagtcttcgg tcttattgga tgtgaagcct tgggacgatg
      601 aaaccgacat gcaaaagctc gaggaagctg tgagaagtgt tcaaatggag ggcttgcatt
      661 ggggtgcatc caagttggta ccggttggat atggtattaa gaagctgcag atcatgatga
      721 ccattgatga tgacctggtg tctgttgatt cactcattga agataaactt atggcagaac
      781 caattaatga atatgttcag agttgtgata ttgtggcctt caataagatc taatttgtca
      841 acgttgctcc aatgcattgg gatgtgcgaa tgcttcatga tagtgtattg tattagtgtt
      901 gtgcatccgt ttaattcctc tgttagtggt tctatctctc tcaacttttt agcattttga
      961 tcatgtttgt gtgtgtttgt gacttgtgat cttatcctct tacgggttta agtagattat
     1021 cgaatatata tttttatatg ttttttttaa
//
LOCUS       XM_071829696            3063 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FLOWERING proteinUS
            D (LOC139839593), mRNA.
ACCESSION   XM_071829696
VERSION     XM_071829696.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3063
                     /gene="LOC139839593"
                     /note="protein FLOWERING LOCUS D; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139839593"
     CDS             47..2872
                     /gene="LOC139839593"
                     /codon_start=1
                     /product="protein FLOWERINGUS D"
                     /protein_id="XP_071685797.1"
                     /db_xref="GeneID:139839593"
                     /translation="MNPPNENPHQILSNTNSPLQFTIHLPQSDPNSNPNSSISNPNPN
                     SSNVNHVLSLGIPGKRRRGRPSSSSTNQVFNLPTSLQNPNQEASVLDVSDEIIVINKE
                     STSEALLALTAGFPADILTEEEIDAGVVSVIGGIEQINYILIRNHIIAKWRENVFTGV
                     TKEMFLNVVPSHCTKLLDSAYNYLVSHGYINFGVIKDRVPVETSGKSNVIVIGAGLSG
                     LAAARQLISFGYKVTVLEGRKRPGGRVYTKKMEGGNRVAAADLGGSVLTGTHGNPLGI
                     LARQLSYPLHKIRDKCPIYGLDGQPVNAEVDAKIEVAFNQLLDKASKLRQLMGEVSQD
                     VSLGAALDTFCEETVNPEEMSLFNWHVANLEYANASLLSRLSLAFWDQDDPYDMGGAH
                     CFLPGGNGRLVQALAENVTILYEKTVQMIRYGSDGVQVVVNGGQVFEGDVALCTVPLG
                     VLKSGSIKFNPELPQRKLDGIKRLGFGLLNKVAMLFSHNFWGTDTDMFGHLSDDPRRR
                     GEFFLFYSYATVAGGPVLIAMVAGEAAHSFESMPPTDAVTRILQILRGIYEPQGIEVP
                     EPIQTICTRWGSDPFCLGSYSNVAVGSSGDDYDILAESVGDGRLFFAGEATTKRYPAT
                     MHGAFLSGLREAANIAHYASNRALRAKLEKNPSKNAHACASLLADLFRDPDLEFGSFS
                     VIYPKKNAQEEEKSMAILRVVFSGPVKKGNEGCVPDQPHSNKLLFQQLQSHFNQQQEV
                     HVYSLLLKEQVFELREVKGGDEMRLNYLCEKLGVKLVGRKGLGPAADAVISSIKAERS
                     KRKPALTSSGLKSGISKPKSAVKQKLVRKAKILRKNNSSSPFPPVNREGGVVAEAAGN
                     NNGSSTPQINQEVEANKVAGGSVSVAANGSPGGGGGGSVIKFVVNGSNESTGSESIIE
                     PPPNLVDKIRNIISSNTPNVQLDGEMK"
     misc_feature    281..2698
                     /gene="LOC139839593"
                     /note="amine oxidase; Region: PLN03000"
                     /db_xref="CDD:178578"
ORIGIN      
        1 aaagcggtaa ctccattcaa ttttttcttc atattttttc aacaccatga atccaccaaa
       61 tgaaaaccca catcaaattc tatccaacac taacagccca ttacaattca caatccatct
      121 tccccaatct gaccccaatt caaaccctaa ttcttcaatt tcaaacccta accctaattc
      181 aagcaatgtc aatcatgtac tctcactcgg aatccctgga aaaagacgac gtggcagacc
      241 atcatcatca tcaacgaatc aggtattcaa tctaccaact tcattacaaa accctaatca
      301 agaagcatca gtgttagatg tatctgatga aatcatagtt attaataaag aatcaacttc
      361 tgaagcttta cttgcattaa ctgctggatt cccagctgat atacttacag aagaagaaat
      421 tgatgctggt gttgtttctg ttatcggtgg gatcgaacag atcaactata tattgattcg
      481 aaatcatatt attgctaaat ggagggaaaa tgtgtttact ggggttacaa aagagatgtt
      541 tttgaatgtt gttccttcac attgtactaa acttttggat tctgcttata actatttagt
      601 ttcacatggt tatattaatt tcggggttat taaggatagg gttcctgtcg aaacgagtgg
      661 taagtcaaat gtgatagtaa ttggggctgg tctttcgggg ttggctgctg cacgacaatt
      721 gatctcgttt gggtataaag ttacggtttt ggaaggtaga aaacgacccg gcggccgagt
      781 ttatacgaaa aaaatggaag gtgggaatcg ggttgcggct gctgatttag gcgggagcgt
      841 tttgacaggt acacatggga acccgttagg gattttggct aggcagttgt cttatcctct
      901 tcataagatt cgagataaat gtccaattta tggtcttgat ggtcaaccag tcaacgcgga
      961 agtcgatgcg aaaatcgagg ttgcgtttaa ccagcttttg gataaagcga gcaaattgag
     1021 acagttaatg ggcgaggttt cgcaagatgt ttcgcttggt gctgctttgg atacattttg
     1081 tgaagaaact gtaaaccctg aagaaatgag tttgtttaac tggcacgttg cgaatttgga
     1141 atatgctaac gcaagtttac tctcgaggct ttcgttagcg ttttgggatc aagatgatcc
     1201 gtacgatatg ggaggcgcac attgctttct gccaggtggc aatggacgat tggttcaagc
     1261 gttagctgag aatgtaacaa ttctatatga gaaaacggtt caaatgatac gttacggtag
     1321 tgatggtgtg caagtggttg ttaatggtgg tcaggtattt gaaggtgatg ttgcgttgtg
     1381 tacggttcct cttggggttt tgaaaagcgg gtcgattaag tttaatcccg agttgcctca
     1441 aaggaaactt gacgggatta aaaggttagg gtttggtttg ttgaataagg ttgctatgct
     1501 tttttctcat aatttttggg ggacggatac tgatatgttt gggcatttgt cggatgatcc
     1561 tagacgtaga ggcgagtttt ttttgtttta tagttatgcg actgtagcgg gtgggcccgt
     1621 tttgattgcc atggtggcag gagaagctgc tcattctttc gaaagcatgc cgcctactga
     1681 tgctgtcaca cgaattcttc aaattcttcg aggtatatac gaaccccaag gaatcgaagt
     1741 ccccgagcca atacaaacca tatgcacgag atggggaagt gatccttttt gtttaggctc
     1801 atactccaac gttgcagtcg gttcatcagg agacgattac gacatcttag ccgaaagtgt
     1861 cggcgacgga agacttttct ttgcaggtga agccaccaca aaacgatatc ccgccaccat
     1921 gcacggagct tttcttagcg gcttacgaga agccgcaaac atcgcacact acgcttctaa
     1981 ccgggcccta cgggccaaac tcgaaaaaaa cccatcgaaa aacgctcacg cgtgcgcgtc
     2041 cctacttgct gacttattca gagaccccga tttggagttt ggaagttttt cagttattta
     2101 tcccaagaaa aacgcgcaag aggaggaaaa gtcaatggcg attttacggg ttgtgtttag
     2161 tgggcccgtt aagaaaggta atgaaggttg tgtacctgac caaccacatt cgaataaatt
     2221 gttgtttcag cagcttcaat cacattttaa tcaacaacaa gaagttcatg tgtactcgtt
     2281 gttattaaaa gagcaagtgt ttgaactaag agaagttaaa ggaggtgatg aaatgagact
     2341 gaattattta tgtgaaaagc ttggagtgaa gttggttggt cgaaaagggt tggggcccgc
     2401 tgctgatgct gtcatttctt ctattaaggc tgaaagaagt aaacgaaagc ctgctttgac
     2461 ttcgtcgggt ctcaaatctg gaatctcgaa gccaaaatcg gctgtgaagc aaaagttggt
     2521 tagaaaggcc aaaatattac gcaaaaacaa tagcagcagc ccatttcctc ctgttaacag
     2581 agaaggtggt gtagtagctg aagcagctgg caataacaac gggtccagta cccctcaaat
     2641 taatcaagag gtggaagcta ataaagtagc tggcggcagc gttagtgttg ccgccaatgg
     2701 ctctcctggt ggtggtggtg gtggttctgt gatcaaattt gttgttaatg gaagcaatga
     2761 aagtacaggt tctgaatcaa taatcgaacc tccaccaaat ttggttgaca aaatcaggaa
     2821 tattattagt tctaatactc caaatgttca attagatggc gaaatgaaat agatgatgat
     2881 gagttttctt ggacaaccat agaatgattt tttttttatc aatttaagtt actttaggga
     2941 tctgtaaaca ttgtatagta catgcatata cattgagttt tagatgaatg tatccatttt
     3001 tcacctggtc ttgtacatca gtaagttaca cttgtaacat attataagtt ggtcatttca
     3061 gaa
//
LOCUS       XM_071829697            4608 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter D family
            member 1 (LOC139839594), mRNA.
ACCESSION   XM_071829697
VERSION     XM_071829697.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4608
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4608
                     /gene="LOC139839594"
                     /note="ABC transporter D family member 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139839594"
     CDS             243..4262
                     /gene="LOC139839594"
                     /codon_start=1
                     /product="ABC transporter D family member 1"
                     /protein_id="XP_071685798.1"
                     /db_xref="GeneID:139839594"
                     /translation="MTSLQLLQLTERGRSLFSSSRRKTLLLATGIIVAGGTAAYMQSQ
                     SRVKRSNGTSHQYNGLGDDNERADMDVRNNSVIKKSTQKKGLKSLQVLAAILLSHMGK
                     LGARDLLALLATVVLRTAVSNRLAKVQGFLFRAAFLRRVPTFVQLIIENITLCFVQSA
                     LYSTSKYITGTLSLRFRKILTKLIHAQYFQNMIYYKMSHVDGRITNPEQRIASDVPKF
                     CSELSDLVQEDLTAVIDGLLYSWRLCSYASPKYIVWILAYVLGAGGTIRNFSPSFGKL
                     MSKEQQLEGEYRQLHSRLRTHAESIAFYGGENREESHIQQKFKALVRHLKVVQHDHWW
                     FGMVQDFLLKYLGATVAVILIIEPFFSGTLRPDTSTLGRAEMLSNLRYHTSVIISLFQ
                     SLGTLSISSRRLNRLSGYADRIHELMAISRELSPKDVPSLQRRGSKNYITQADYIEFN
                     GVKVVTPSGNVLVEDLTLKVESGTNLLITGPNGSGKSSLFRVLGGLWPLVSGHIVKPG
                     VGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTTDQEAEPLSHSEMVELLKNVDLEYLL
                     NRYPAEKEINWGEELSLGEQQRLGMARLFYHKPRFAILDECTSAVTTDMEERFCAKVR
                     AMGTSCITISHRPALVAFHDVVLSLDGEGGWRVNDKRDNSRVRSNIDAGSPRLKSSES
                     ERQSDAMAVQRAFENTRNDSAFSGSKSQSYFSELIAASPSEDDILSLPVVPQLQTDPR
                     VLPLRIAAMFKVLVPTVLDKQGAQLLAVAVLVISRTFISDRIASLNGTTVKYVLEQDK
                     AAFLRLIGVSVLQSAASSFVAPSLRHLTSRLALGWRIRLTSHLLKNYLRKNAYYKVFH
                     ISGVSIDADQRITQDLEKLTTDMSGLVTGMVKPSVDILWFTWRMKMLTGRRGVAILYA
                     YMLLGLGFLRCVTPDFGDLGNREQELEGSFRFMHERLRTHAESVAFFGGGAREKAMIE
                     SRFNELLAHAKILLRKKWLFGVLDDFVTKQLPHNVTWGLSLLYAMEHKADRSLTSTQG
                     DLAHALRFLASVVSQSFLAFGDILELHRKFIELSGGINRIFELEEFLDAAQSDEVVCT
                     SSQSNEMHNEADDCISFTEVDIITPTQKLLARKLTCDIEPGKSLLLTGPNGSGKSSVF
                     RALRGLWPIVDGRLVKPSHNVNDGGEAGCGILYIPQKPYTCLGTLRDQIIYPLSHEQA
                     EKRVLSLYQQGQTDGDTNIMDLHLKTILENVKLSYLFDREGSWDASQNWEDILSLGEQ
                     QRLGMARLFFHKPRFGVLDECTNATSVDVEEHLYRLARDMGITVITSSQRPALIPFHS
                     MELRLIDGEGKWELRSIKQ"
     misc_feature    594..2210
                     /gene="LOC139839594"
                     /note="Peroxysomal Fatty Acyl CoA Transporter (FAT) Family
                     protein; Region: 3a01203; TIGR00954"
                     /db_xref="CDD:273360"
     misc_feature    2475..4244
                     /gene="LOC139839594"
                     /note="Peroxysomal Fatty Acyl CoA Transporter (FAT) Family
                     protein; Region: 3a01203; TIGR00954"
                     /db_xref="CDD:273360"
     polyA_site      4608
                     /gene="LOC139839594"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacctgccaa aaccaccgat ccaaacacac cccttaaacc accaatccac catcgcatcc
       61 atatctagta cacacacata taaatctatt tttttttttt ttttttcagc tctcgatcaa
      121 aattcataac tcactcttga tgcttatact tcaattattt aatcaaaatc gattagttta
      181 ggttttagcg attggctgac gtcattgcta ctatcatcaa tttgtggatt tgaactgtag
      241 ctatgacttc tcttcagtta ttacagttaa cggaacgagg ccggagcttg ttttcgtcca
      301 gtcgcagaaa aacactattg ctggccactg gcattatagt tgctggtggg actgctgcat
      361 acatgcaatc acagagtaga gtaaaaaggt ccaacggaac gagtcatcaa tacaatggat
      421 tgggagacga caatgaacga gcagatatgg atgtcagaaa taattctgtt ataaaaaaaa
      481 gtacgcaaaa gaaaggatta aaatcgctcc aggttctggc tgccattctc ttatcccata
      541 tgggcaaatt gggagcaagg gaccttttag cacttttggc cactgtggta ttacgaactg
      601 ctgtgagcaa tagattagca aaagttcaag ggttcttgtt tcgcgctgct tttcttcgac
      661 gagtgccgac cttcgttcag ctgattattg aaaacattac cttatgtttt gttcaatcgg
      721 ccttgtattc tacatccaag tacataacag ggaccttaag cttgaggttc aggaaaatac
      781 ttacaaagct tattcatgca caatattttc agaatatgat atattacaaa atgtcccatg
      841 ttgatggccg gataactaat cccgagcaaa gaattgctag tgatgtaccg aagttctgct
      901 cagaattgag tgatcttgta caggaagatc ttactgcagt tattgatggc ctgctatatt
      961 cttggcgcct gtgttcttat gccagtccta agtatatagt ttggatattg gcttatgtgc
     1021 taggagcagg tggcactatc cgaaacttct ctccttcatt tggtaaattg atgtctaaag
     1081 aacaacaact tgaaggtgaa tatcgacaac ttcactcgag attaaggact catgccgaaa
     1141 gcatagcatt ttatgggggt gaaaataggg aagaatccca tatccagcag aagttcaagg
     1201 cacttgttag gcatttaaaa gttgtccaac atgaccattg gtggtttggc atggttcaag
     1261 atttcttatt gaagtatctt ggagccactg ttgctgttat attaatcata gagccgttct
     1321 tctcggggac tttaagacct gacacttcaa cattaggacg ggcagaaatg ttgagcaatc
     1381 tcagatatca tactagtgta ataatttcat tatttcagtc cttgggaact ctctccataa
     1441 gttctagacg gttaaatcgt ctaagtggct atgcggatcg tatacatgag cttatggcta
     1501 tatctagaga gttaagtcca aaagatgtac catctctaca aagaagaggg agtaagaatt
     1561 atataactca agcagactac atagagttta acggagtcaa ggtggttact ccaagtggta
     1621 atgtattggt ggaagacttg actttaaagg tcgaatcagg aactaatctt ttaatcacag
     1681 gaccaaatgg tagtggcaaa agctcactgt tcagagtttt gggaggctta tggcctttgg
     1741 tgtctggaca tatcgtgaaa cctggggttg gttcagatct caataaagag attttttatg
     1801 ttccgcaacg tccgtataca gctgtaggga cactacgtga ccagttgata tatcctctaa
     1861 caacagatca agaagctgag cctctctctc acagcgaaat ggtcgagctt ctgaaaaacg
     1921 ttgacctaga gtatttatta aatcgttacc ccgctgaaaa agagattaat tggggggaag
     1981 agttgtctct tggggaacaa caaagattgg gaatggcaag gcttttttat cacaaaccaa
     2041 gatttgcaat tcttgatgaa tgcacaagtg cagttactac tgatatggaa gaacgctttt
     2101 gtgctaaagt ccgtgcaatg ggaacatcgt gcatcactat atctcaccga cctgctcttg
     2161 ttgctttcca tgatgtggta ctgtcgttgg atggggaagg gggttggaga gttaatgaca
     2221 aaagggacaa ttcccgagtt cgtagtaata ttgatgcagg atctcctaga ttgaagtcat
     2281 ctgaatcaga acgtcaaagt gatgcaatgg cagttcaacg tgcatttgaa aataccagaa
     2341 atgactccgc cttttctggt tccaagtccc agtcgtattt ctcagagtta atagctgcgt
     2401 ccccatccga ggacgatatt ttatctttgc ctgttgtgcc acaactgcaa actgatcccc
     2461 gtgtattgcc gttaagaata gctgccatgt ttaaagtact ggttcctact gtacttgata
     2521 agcaaggagc acaacttctt gctgttgcag ttcttgtaat ttctagaact tttatatcgg
     2581 atcgtatagc ttctttgaat ggaacaactg taaagtatgt tttggagcag gataaagcag
     2641 cctttttacg tttgataggt gttagtgtcc tccaaagtgc tgcctcttca ttcgtcgcac
     2701 cttcattgag gcacttgact tccaggcttg cacttggatg gaggattcgc ttgacttcac
     2761 acttattgaa gaattacttg agaaagaacg cctattacaa ggtatttcac atttcaggag
     2821 ttagtattga tgcagatcag agaataacac aagatcttga aaaattaact actgatatgt
     2881 ccggtctggt aacaggaatg gtaaagccaa gtgtcgatat tctatggttc acatggagaa
     2941 tgaagatgtt aacaggccgc cgtggtgttg ctatcctcta tgcatatatg ttactaggtt
     3001 taggattttt aagatgtgtc actccagatt ttggtgatct aggaaatcgg gaacaagaac
     3061 tcgaagggag ttttagattc atgcacgaga gactgcgtac ccatgctgaa tctgttgctt
     3121 tctttggcgg tggtgctcga gaaaaagcga tgattgagtc aagattcaat gagcttcttg
     3181 ctcatgcgaa aatactttta aggaagaaat ggttatttgg tgtactggac gactttgtca
     3241 cgaaacagct acctcataat gttacttggg gattgagttt gttatatgcc atggaacaca
     3301 aagctgaccg ttcattgact tccactcaag gtgacctggc acatgcattg cggttcttgg
     3361 catcggttgt atcccaaagc tttttggcct ttggtgacat tttggagttg cataggaagt
     3421 tcattgagct ctctggtggt attaatcgaa ttttcgaact cgaagagttt ctcgatgctg
     3481 cgcaatctga tgaagttgtt tgtacttcat cacagtccaa tgagatgcat aatgaagctg
     3541 acgattgtat atcttttacg gaggttgata ttattacacc aacccaaaaa ttattagcca
     3601 gaaagttgac atgtgatatc gagccaggga aaagccttct tctaacgggt ccgaatggca
     3661 gtggtaaaag ttcagtcttc agggctctcc ggggtctttg gcccatcgtt gatgggcgac
     3721 ttgtaaaacc ttctcacaat gttaatgatg gtggtgaagc tggttgtggt atattataca
     3781 ttcctcaaaa gccatatact tgtcttggaa cattacgaga ccaaattata tatcctctct
     3841 cacacgagca agccgaaaag agggtcttaa gtttgtatca acaagggcaa acggatggcg
     3901 acacaaatat tatggatctg catcttaaaa cgatcctaga aaacgtgaaa ttatcgtacc
     3961 tttttgacag agaaggaagc tgggatgcta gtcagaactg ggaagacatt ctttctctag
     4021 gagaacaaca gagattaggc atggctcgtt tgtttttcca caagcctcgg tttggtgtcc
     4081 tagatgaatg caccaatgcc acaagtgttg atgttgaaga gcacctttat aggcttgcac
     4141 gtgacatggg catcacagtt attacatcat cacagcgtcc tgctcttata ccattccact
     4201 cgatggaatt acggttgatt gatggtgaag gcaagtggga gcttcggtca atcaagcaat
     4261 gagtcaaggt tttatagcta cttgttaggc aatcttctac agagagcctt aattggtcat
     4321 gtgccacata ctaagtgaaa taaagggacc aaaaattggg tatacaacta tatctcaaga
     4381 ttatttcgtg taatatataa aacatatgta tatttatttt gttgtaaaga acactagctt
     4441 tggtatagtc gattcgttta acctgtatta ggagaaatcg aggaaataag tccggtatat
     4501 tagatttaag aaggttgttt ccgtcgaata gggctgatta aatgctagta attgttatta
     4561 gcaactagtt actagattta tgtatggagt gattggcttt tcttttca
//
LOCUS       XM_071829699            1765 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine protein
            phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
            (LOC139839595), transcript variant X1, mRNA.
ACCESSION   XM_071829699
VERSION     XM_071829699.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1765
                     /gene="LOC139839595"
                     /note="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' beta isoform-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 55 Proteins"
                     /db_xref="GeneID:139839595"
     CDS             311..1765
                     /gene="LOC139839595"
                     /codon_start=1
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' beta isoform-like"
                     /protein_id="XP_071685800.1"
                     /db_xref="GeneID:139839595"
                     /translation="MLRIIKGMKKGSKPEVIEPPPGPNGPSDVTVNHASRSANPQLTN
                     LKSQAITRTASPQTSVVEVTPMLKDVPVSERHVLFIKKVSMCSVSFDFSDVSKRVGEK
                     EIKRQNLQELVDLVQSCSSKMNEIMQEEMINMISVNIFRPLPPAAFENTGAIDGDPEE
                     DDVYLEPCWSHLQLAYELLLRYVVSPDTDTKVAKKFIDHSFVLNLLDMFYSEDPRERE
                     YLKTILHRIYGKFIVHRPFIRKAINNIFYRFIFETERHPGLGELLEILGSIINGFAVP
                     MKEEHKVFLVHALIPLHKAKFINYYHQQLSYCVVQFVEKDYKLADDVIRGLLKYWPVT
                     NCTKEILFLGELEEVLDATQPAEFQRCMVPLFRRIGYCINSPNFQVAERALFFWNNEH
                     FVDLIAQNRDVILPIIFEPLEKNIQGHWNQAINELTRNVRKMFIDMDADLVEECSNQL
                     SQKQAMVNEMLEQHEMAWKKLEAIASGDDIVMAN"
     misc_feature    341..>559
                     /gene="LOC139839595"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); Region: B56; cl27532"
                     /db_xref="CDD:474937"
     misc_feature    521..1735
                     /gene="LOC139839595"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); Region: B56; pfam01603"
                     /db_xref="CDD:460264"
ORIGIN      
        1 cctaaatcta attctgcata tactttctgt ttctggatat ttcttttttc ggatctctca
       61 ttccttcact ctgatcagcc gggtacttcc caaatccttc tattttcatt tttaatcatt
      121 cctctttaca taattcctca cattatatct gtaattaggg tttcaattgg ttgatcgatt
      181 gctaccacga acctgtatag acaaagatat acgtatacat atgcctctaa taatacgaat
      241 tacgagaatg aactagaatc ctacagatag tttatatatt ttgtgaatta ggttttggaa
      301 aattgtaagt atgttgagga tcattaaagg aatgaaaaaa ggttcgaaac cggaagtgat
      361 cgaaccacca cctggaccta acggtccatc tgacgtcact gtaaatcacg cttcacgttc
      421 ggctaaccct cagctgacta atcttaagtc acaagccatc actcgaaccg cttcacctca
      481 aactagtgtg gttgaggtca ctccaatgct aaaagatgta cctgtatccg aacgtcacgt
      541 tttattcatt aagaaagtga gtatgtgttc cgtttcgttt gatttttctg acgtgtcgaa
      601 gagagttgga gaaaaagaga ttaagagaca gaatttacaa gagctcgtcg atttagtgca
      661 gtcgtgttcg agtaaaatga acgagattat gcaggaagaa atgattaata tgatatcggt
      721 taatatattc agacctttac ctcctgctgc atttgaaaat acaggtgcta tcgatggtga
      781 tcctgaagaa gatgatgtgt atttggaacc gtgttggtcg catttacaac ttgcgtacga
      841 attgcttttg agatatgtgg tttcgcctga tactgatact aaagtagcta agaaatttat
      901 tgatcattcg tttgtgttga atttgctcga tatgttttat tcagaagatc cacgggagcg
      961 agagtattta aagactatac tccaccgcat atatggtaaa tttatagttc atcgaccgtt
     1021 tataaggaag gctataaata atatctttta tagatttata tttgaaaccg agcgacatcc
     1081 cgggcttggt gaattattgg agattcttgg aagtataata aatggttttg ctgttccgat
     1141 gaaagaagag cataaggtgt tccttgtaca cgcactcatc ccgttacata aggcgaagtt
     1201 tattaattat tatcatcaac agttatcgta ctgtgttgtc cagtttgttg aaaaagatta
     1261 caaattggct gatgatgtga ttagagggtt attgaaatac tggcctgtta ctaattgtac
     1321 aaaggaaatt ttgtttcttg gggagttaga agaagttttg gatgcaactc agcctgcaga
     1381 gtttcaacgc tgcatggttc ctctctttcg aaggattgga tactgcatta atagtcctaa
     1441 tttccaggtt gcagaaagag cactgttttt ctggaacaat gaacattttg tagacttgat
     1501 tgcacagaat cgggacgtca ttttacccat catttttgaa ccgttagaga agaatattca
     1561 gggtcattgg aaccaggcaa tcaatgaatt aactcgcaat gtccgaaaaa tgttcatcga
     1621 catggatgca gacctcgttg aagaatgcag taatcagtta tcacaaaaac aagccatggt
     1681 caatgagatg ctagagcaac atgagatggc ttggaagaaa cttgaggcaa ttgcatcggg
     1741 agatgatata gtcatggcta actaa
//
LOCUS       XM_071829700            1713 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine protein
            phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
            (LOC139839595), transcript variant X2, mRNA.
ACCESSION   XM_071829700
VERSION     XM_071829700.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1713
                     /gene="LOC139839595"
                     /note="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' beta isoform-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 55 Proteins"
                     /db_xref="GeneID:139839595"
     CDS             259..1713
                     /gene="LOC139839595"
                     /codon_start=1
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' beta isoform-like"
                     /protein_id="XP_071685801.1"
                     /db_xref="GeneID:139839595"
                     /translation="MLRIIKGMKKGSKPEVIEPPPGPNGPSDVTVNHASRSANPQLTN
                     LKSQAITRTASPQTSVVEVTPMLKDVPVSERHVLFIKKVSMCSVSFDFSDVSKRVGEK
                     EIKRQNLQELVDLVQSCSSKMNEIMQEEMINMISVNIFRPLPPAAFENTGAIDGDPEE
                     DDVYLEPCWSHLQLAYELLLRYVVSPDTDTKVAKKFIDHSFVLNLLDMFYSEDPRERE
                     YLKTILHRIYGKFIVHRPFIRKAINNIFYRFIFETERHPGLGELLEILGSIINGFAVP
                     MKEEHKVFLVHALIPLHKAKFINYYHQQLSYCVVQFVEKDYKLADDVIRGLLKYWPVT
                     NCTKEILFLGELEEVLDATQPAEFQRCMVPLFRRIGYCINSPNFQVAERALFFWNNEH
                     FVDLIAQNRDVILPIIFEPLEKNIQGHWNQAINELTRNVRKMFIDMDADLVEECSNQL
                     SQKQAMVNEMLEQHEMAWKKLEAIASGDDIVMAN"
     misc_feature    289..>507
                     /gene="LOC139839595"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); Region: B56; cl27532"
                     /db_xref="CDD:474937"
     misc_feature    469..1683
                     /gene="LOC139839595"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); Region: B56; pfam01603"
                     /db_xref="CDD:460264"
ORIGIN      
        1 aacaaaacta caaattaaaa taaacctaaa tctaattctg catatacttt ctgtttctgg
       61 atatttcttt tttcggatct ctcattcctt cactctgatc agccggggtt tcaattggtt
      121 gatcgattgc taccacgaac ctgtatagac aaagatatac gtatacatat gcctctaata
      181 atacgaatta cgagaatgaa ctagaatcct acagatagtt tatatatttt gtgaattagg
      241 ttttggaaaa ttgtaagtat gttgaggatc attaaaggaa tgaaaaaagg ttcgaaaccg
      301 gaagtgatcg aaccaccacc tggacctaac ggtccatctg acgtcactgt aaatcacgct
      361 tcacgttcgg ctaaccctca gctgactaat cttaagtcac aagccatcac tcgaaccgct
      421 tcacctcaaa ctagtgtggt tgaggtcact ccaatgctaa aagatgtacc tgtatccgaa
      481 cgtcacgttt tattcattaa gaaagtgagt atgtgttccg tttcgtttga tttttctgac
      541 gtgtcgaaga gagttggaga aaaagagatt aagagacaga atttacaaga gctcgtcgat
      601 ttagtgcagt cgtgttcgag taaaatgaac gagattatgc aggaagaaat gattaatatg
      661 atatcggtta atatattcag acctttacct cctgctgcat ttgaaaatac aggtgctatc
      721 gatggtgatc ctgaagaaga tgatgtgtat ttggaaccgt gttggtcgca tttacaactt
      781 gcgtacgaat tgcttttgag atatgtggtt tcgcctgata ctgatactaa agtagctaag
      841 aaatttattg atcattcgtt tgtgttgaat ttgctcgata tgttttattc agaagatcca
      901 cgggagcgag agtatttaaa gactatactc caccgcatat atggtaaatt tatagttcat
      961 cgaccgttta taaggaaggc tataaataat atcttttata gatttatatt tgaaaccgag
     1021 cgacatcccg ggcttggtga attattggag attcttggaa gtataataaa tggttttgct
     1081 gttccgatga aagaagagca taaggtgttc cttgtacacg cactcatccc gttacataag
     1141 gcgaagttta ttaattatta tcatcaacag ttatcgtact gtgttgtcca gtttgttgaa
     1201 aaagattaca aattggctga tgatgtgatt agagggttat tgaaatactg gcctgttact
     1261 aattgtacaa aggaaatttt gtttcttggg gagttagaag aagttttgga tgcaactcag
     1321 cctgcagagt ttcaacgctg catggttcct ctctttcgaa ggattggata ctgcattaat
     1381 agtcctaatt tccaggttgc agaaagagca ctgtttttct ggaacaatga acattttgta
     1441 gacttgattg cacagaatcg ggacgtcatt ttacccatca tttttgaacc gttagagaag
     1501 aatattcagg gtcattggaa ccaggcaatc aatgaattaa ctcgcaatgt ccgaaaaatg
     1561 ttcatcgaca tggatgcaga cctcgttgaa gaatgcagta atcagttatc acaaaaacaa
     1621 gccatggtca atgagatgct agagcaacat gagatggctt ggaagaaact tgaggcaatt
     1681 gcatcgggag atgatatagt catggctaac taa
//
LOCUS       XM_071829701            1070 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839596), mRNA.
ACCESSION   XM_071829701
VERSION     XM_071829701.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1070
                     /gene="LOC139839596"
                     /note="uncharacterized LOC139839596; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139839596"
     CDS             43..915
                     /gene="LOC139839596"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685802.1"
                     /db_xref="GeneID:139839596"
                     /translation="MGVETQKPRWGELEEEETDYDFLLPPKQVIGPDEHGMKKVIEYK
                     FNDEGNRVKITTNIRVRKLANTQLSKRAVERRSWLKFGDAVHEDVGARLTMVSTEEII
                     FERPRAPGTKAEDSNASGDPLAQMSKGGAVLMVCRTCGKKGDHWTSKCPYKDLAQPTE
                     TFVENPTPADSPAIGTSGPTKGSYVPPSMRAGAVRPTAGADMRRRNDENSVRVNNLSE
                     DTREPDLLELFRPFGNVSRVYVAMDQKTGMSRGFGFVNFVRREEGERAIAKLNGYGYD
                     NLILSVEWAAPRAN"
     misc_feature    124..510
                     /gene="LOC139839596"
                     /note="Eukaryotic translation initiation factor 3 subunit
                     G; Region: eIF3g; pfam12353"
                     /db_xref="CDD:463545"
     misc_feature    670..897
                     /gene="LOC139839596"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     translation initiation factor 3 subunit G (eIF-3G) and
                     similar proteins; Region: RRM_eIF3G_like; cd12408"
                     /db_xref="CDD:409842"
     polyA_site      1070
                     /gene="LOC139839596"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaatctcaa tcgatctctc tttctctctc aatccagcag tcatgggcgt cgaaactcaa
       61 aaacctagat ggggcgaact cgaagaagaa gaaactgatt acgatttttt gttaccacca
      121 aaacaagtaa tcggacctga tgaacacgga atgaagaaag tgatcgaata caagtttaac
      181 gatgaaggta accgtgttaa gattactact aatattcgtg tccgtaagct tgctaatact
      241 cagcttagta aacgcgctgt tgaaagacgt tcatggctta aatttggtga tgcggttcat
      301 gaagatgttg gtgctaggct taccatggtt tctactgaag aaattatctt tgaaagacct
      361 agggctccag gtaccaaagc tgaagactcg aatgcatctg gagatccatt ggctcaaatg
      421 tcaaaaggag gtgcagttct tatggtttgc aggacttgtg ggaaaaaagg tgaccactgg
      481 acttcaaaat gtccctacaa ggatctggcc cagcccactg aaacatttgt cgagaacccg
      541 acccctgctg actcacccgc catcggtact tcgggtccca ccaaaggatc atatgtcccg
      601 ccctccatgc gtgcaggtgc agtgagaccc actgccggtg ctgacatgag acgcaggaac
      661 gatgagaact ctgttcgggt caataaccta tctgaggata ctcgtgagcc tgatttgttg
      721 gagctgttca gaccatttgg gaacgtgtct cgtgtttatg ttgctatgga tcaaaagact
      781 ggaatgagcc gagggtttgg gtttgttaat ttcgtaagaa gggaagaagg tgagagagct
      841 attgctaaac tcaatgggta tggttatgat aaccttatct tgagtgttga atgggctgcc
      901 cccagagcaa attagtgttg tttggtaatg tggactatcg ttttgaagaa ttgttaaagt
      961 gtgtaaccaa gattttgagt ttttctgttt aatgtctaaa aaaacataat tatagactgc
     1021 cttaaatttg cagctcaaac attgttaatg caatgatggt gtttttgtta
//
LOCUS       XM_071829702            1700 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pre-mRNA splicing factor
            SR-like 1 (LOC139839597), transcript variant X1, mRNA.
ACCESSION   XM_071829702
VERSION     XM_071829702.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1700
                     /gene="LOC139839597"
                     /note="pre-mRNA splicing factor SR-like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139839597"
     CDS             239..1414
                     /gene="LOC139839597"
                     /codon_start=1
                     /product="pre-mRNA splicing factor SR-like 1 isoform X1"
                     /protein_id="XP_071685803.1"
                     /db_xref="GeneID:139839597"
                     /translation="MEIPIKPIDQLLERVLCMNILSSDYFKGLIRFKTYHEVVDEIYN
                     EVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRY
                     AADPKSLWGWFEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVM
                     RSITANLERLKLPTKHCGVTGESTRGSDDMARRPPSVKASLSVSFGQRAPHRASTRDS
                     SPVRRTLPPLPSYDRNDNEDSRRSPSRHRSQSRDLSDRDYPERNRDRDHDRYYRKDRD
                     RDRDRDRDRYRDRRHDYDRRSRERSSRDYHRGSSSRRSRSRSRSRSRSRSVFVDRQPS
                     PKREEIKDRTSATSNLAKLKDMYGDLTTENGGATDGRGPGRSNGAEEVIRLGGSTWR"
     misc_feature    269..721
                     /gene="LOC139839597"
                     /note="PRP38 family; Region: PRP38; pfam03371"
                     /db_xref="CDD:460901"
     misc_feature    779..1036
                     /gene="LOC139839597"
                     /note="Pre-mRNA-splicing factor 38-associated hydrophilic
                     C-term; Region: PRP38_assoc; pfam12871"
                     /db_xref="CDD:463734"
     polyA_site      1700
                     /gene="LOC139839597"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtacgcatc aataaacttt cagccaggaa attattatat gctccttttc agttttgggg
       61 tctagggtta gctgacgaac acacaaaaaa aaccctaaat tcactcgttc tgagattgtg
      121 tttctcaaat tccggcccat attttcatat ttatcacagc agaaaggatt gaaagctgtt
      181 ttgttttaag tgaagtgtaa aaagcagctg acttttggac attgtttggt ttgaaggtat
      241 ggaaataccg attaagccga ttgatcaact gttggaaagg gtactttgta tgaacatcct
      301 ttcgtcagat tattttaaag ggcttattcg gttcaaaaca tatcatgagg tggttgatga
      361 gatatacaat gaagtggatc acgtggaacc gtggatgact gggaattgtc gtgggccttc
      421 gaccgcattt tgtcttctgt acaagttctt tactatgaag cttactgtaa aacaaatgca
      481 tggactattg aagcacccgg attctccgta cattagagcg attggatttc tatacttgag
      541 gtatgctgca gatcctaaaa gcttgtgggg ctggtttgaa ccgtacatca aggatgatga
      601 ggagttctcg cctggatcta atggtaggat gacaacaatg ggcgtctacg tgcgggacct
      661 acttcttgga cagtactact ttgatacgtt gtttccccgt atccctgttc cagtaatgcg
      721 gtcaattaca gcaaacctcg aaagactgaa acttcccacc aaacattgtg gagtaactgg
      781 ggaatccaca cgtgggtctg atgacatggc acgtcgacca ccttctgtta aagcttctct
      841 ctcggtttct ttcggtcagc gggcccctca tcgtgcatcc acacgagatt cctcccctgt
      901 tcggcgtact ctcccacctc taccttccta tgaccgaaac gacaacgaag attctcgaag
      961 atccccatcc cgtcaccgta gccaaagccg tgatttatcc gatcgggatt atcctgaaag
     1021 gaatagagat cgggaccacg accgttatta tcgaaaggat agagatagag acagggatag
     1081 agatagagac aggtatagag ataggaggca tgattatgat cgaaggtcca gggaaagaag
     1141 cagtagggac taccacagag gatcgagttc tcgtagaagt cgaagtagga gtaggagcag
     1201 gagcaggagc cgaagtgtgt ttgtggaccg tcaaccaagt ccaaagagag aagaaataaa
     1261 agatagaaca tctgcaacca gcaacctagc gaagcttaaa gacatgtatg gtgatttgac
     1321 tactgaaaat ggtggtgcga ctgatggtag gggtcctggt aggagtaatg gtgctgaaga
     1381 ggtcatacgg ctcggtggtt caacttggag gtaaccatgt gcatctgaca gtatcaggac
     1441 ccggcacaat ataatataca tgcgcctatt caattgtggt aaggaaacga tggcatgtat
     1501 atttaatttg actttgagat tgacttgttt taaattggtc aatgtattac tgtaacttct
     1561 tcacatctta taggctgttt actttttttt tttttttttt tttttttttt tgtgaatttg
     1621 tgtctgtttc tatttgacta tgtttgagaa gggtatttga tttttatgtc tcatagaaat
     1681 agaccaattt tcagattcaa
//
LOCUS       XM_071829703            1630 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pre-mRNA splicing factor
            SR-like 1 (LOC139839597), transcript variant X2, mRNA.
ACCESSION   XM_071829703
VERSION     XM_071829703.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1630
                     /gene="LOC139839597"
                     /note="pre-mRNA splicing factor SR-like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139839597"
     CDS             169..1344
                     /gene="LOC139839597"
                     /codon_start=1
                     /product="pre-mRNA splicing factor SR-like 1 isoform X1"
                     /protein_id="XP_071685804.1"
                     /db_xref="GeneID:139839597"
                     /translation="MEIPIKPIDQLLERVLCMNILSSDYFKGLIRFKTYHEVVDEIYN
                     EVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRY
                     AADPKSLWGWFEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVM
                     RSITANLERLKLPTKHCGVTGESTRGSDDMARRPPSVKASLSVSFGQRAPHRASTRDS
                     SPVRRTLPPLPSYDRNDNEDSRRSPSRHRSQSRDLSDRDYPERNRDRDHDRYYRKDRD
                     RDRDRDRDRYRDRRHDYDRRSRERSSRDYHRGSSSRRSRSRSRSRSRSRSVFVDRQPS
                     PKREEIKDRTSATSNLAKLKDMYGDLTTENGGATDGRGPGRSNGAEEVIRLGGSTWR"
     misc_feature    199..651
                     /gene="LOC139839597"
                     /note="PRP38 family; Region: PRP38; pfam03371"
                     /db_xref="CDD:460901"
     misc_feature    709..966
                     /gene="LOC139839597"
                     /note="Pre-mRNA-splicing factor 38-associated hydrophilic
                     C-term; Region: PRP38_assoc; pfam12871"
                     /db_xref="CDD:463734"
     polyA_site      1630
                     /gene="LOC139839597"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtacgcatc aataaacttt cagccaggaa attattatat gctccttttc agttttgggg
       61 tctagggtta gctgacgaac acacaaaaaa aaccctaaat tcactcgttc tgagattgtg
      121 tttctcaaat tccggcccat attttcatat ttatcacagc agaaaggtat ggaaataccg
      181 attaagccga ttgatcaact gttggaaagg gtactttgta tgaacatcct ttcgtcagat
      241 tattttaaag ggcttattcg gttcaaaaca tatcatgagg tggttgatga gatatacaat
      301 gaagtggatc acgtggaacc gtggatgact gggaattgtc gtgggccttc gaccgcattt
      361 tgtcttctgt acaagttctt tactatgaag cttactgtaa aacaaatgca tggactattg
      421 aagcacccgg attctccgta cattagagcg attggatttc tatacttgag gtatgctgca
      481 gatcctaaaa gcttgtgggg ctggtttgaa ccgtacatca aggatgatga ggagttctcg
      541 cctggatcta atggtaggat gacaacaatg ggcgtctacg tgcgggacct acttcttgga
      601 cagtactact ttgatacgtt gtttccccgt atccctgttc cagtaatgcg gtcaattaca
      661 gcaaacctcg aaagactgaa acttcccacc aaacattgtg gagtaactgg ggaatccaca
      721 cgtgggtctg atgacatggc acgtcgacca ccttctgtta aagcttctct ctcggtttct
      781 ttcggtcagc gggcccctca tcgtgcatcc acacgagatt cctcccctgt tcggcgtact
      841 ctcccacctc taccttccta tgaccgaaac gacaacgaag attctcgaag atccccatcc
      901 cgtcaccgta gccaaagccg tgatttatcc gatcgggatt atcctgaaag gaatagagat
      961 cgggaccacg accgttatta tcgaaaggat agagatagag acagggatag agatagagac
     1021 aggtatagag ataggaggca tgattatgat cgaaggtcca gggaaagaag cagtagggac
     1081 taccacagag gatcgagttc tcgtagaagt cgaagtagga gtaggagcag gagcaggagc
     1141 cgaagtgtgt ttgtggaccg tcaaccaagt ccaaagagag aagaaataaa agatagaaca
     1201 tctgcaacca gcaacctagc gaagcttaaa gacatgtatg gtgatttgac tactgaaaat
     1261 ggtggtgcga ctgatggtag gggtcctggt aggagtaatg gtgctgaaga ggtcatacgg
     1321 ctcggtggtt caacttggag gtaaccatgt gcatctgaca gtatcaggac ccggcacaat
     1381 ataatataca tgcgcctatt caattgtggt aaggaaacga tggcatgtat atttaatttg
     1441 actttgagat tgacttgttt taaattggtc aatgtattac tgtaacttct tcacatctta
     1501 taggctgttt actttttttt tttttttttt tttttttttt tgtgaatttg tgtctgtttc
     1561 tatttgacta tgtttgagaa gggtatttga tttttatgtc tcatagaaat agaccaattt
     1621 tcagattcaa
//
LOCUS       XM_071829704            1407 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pre-mRNA splicing factor
            SR-like 1 (LOC139839597), transcript variant X3, mRNA.
ACCESSION   XM_071829704
VERSION     XM_071829704.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1407
                     /gene="LOC139839597"
                     /note="pre-mRNA splicing factor SR-like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839597"
     CDS             186..1121
                     /gene="LOC139839597"
                     /codon_start=1
                     /product="pre-mRNA splicing factor SR-like 1 isoform X2"
                     /protein_id="XP_071685805.1"
                     /db_xref="GeneID:139839597"
                     /translation="MDLTGIWLKASICFIGFLYLRYAADPKSLWGWFEPYIKDDEEFS
                     PGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRSITANLERLKLPTKHCGVTGE
                     STRGSDDMARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPLPSYDRNDNEDSR
                     RSPSRHRSQSRDLSDRDYPERNRDRDHDRYYRKDRDRDRDRDRDRYRDRRHDYDRRSR
                     ERSSRDYHRGSSSRRSRSRSRSRSRSRSVFVDRQPSPKREEIKDRTSATSNLAKLKDM
                     YGDLTTENGGATDGRGPGRSNGAEEVIRLGGSTWR"
     misc_feature    <228..428
                     /gene="LOC139839597"
                     /note="PRP38 family; Region: PRP38; pfam03371"
                     /db_xref="CDD:460901"
     misc_feature    486..743
                     /gene="LOC139839597"
                     /note="Pre-mRNA-splicing factor 38-associated hydrophilic
                     C-term; Region: PRP38_assoc; pfam12871"
                     /db_xref="CDD:463734"
     polyA_site      1407
                     /gene="LOC139839597"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgttaagtgc cataagtttc agttcaaata ttaatacttt gtgtcagtag acatatttag
       61 taattttttt acctgtgcat tgccttttgg attgcatatg ctcgaccttg gttgttaaat
      121 ccgtaacgaa gtttatttgg tagcgctact gtaacctgag tcgtttttgg aatgcaaatt
      181 ttttcatgga tttgactggt atttggttaa aggcttctat atgttttatt ggatttctat
      241 acttgaggta tgctgcagat cctaaaagct tgtggggctg gtttgaaccg tacatcaagg
      301 atgatgagga gttctcgcct ggatctaatg gtaggatgac aacaatgggc gtctacgtgc
      361 gggacctact tcttggacag tactactttg atacgttgtt tccccgtatc cctgttccag
      421 taatgcggtc aattacagca aacctcgaaa gactgaaact tcccaccaaa cattgtggag
      481 taactgggga atccacacgt gggtctgatg acatggcacg tcgaccacct tctgttaaag
      541 cttctctctc ggtttctttc ggtcagcggg cccctcatcg tgcatccaca cgagattcct
      601 cccctgttcg gcgtactctc ccacctctac cttcctatga ccgaaacgac aacgaagatt
      661 ctcgaagatc cccatcccgt caccgtagcc aaagccgtga tttatccgat cgggattatc
      721 ctgaaaggaa tagagatcgg gaccacgacc gttattatcg aaaggataga gatagagaca
      781 gggatagaga tagagacagg tatagagata ggaggcatga ttatgatcga aggtccaggg
      841 aaagaagcag tagggactac cacagaggat cgagttctcg tagaagtcga agtaggagta
      901 ggagcaggag caggagccga agtgtgtttg tggaccgtca accaagtcca aagagagaag
      961 aaataaaaga tagaacatct gcaaccagca acctagcgaa gcttaaagac atgtatggtg
     1021 atttgactac tgaaaatggt ggtgcgactg atggtagggg tcctggtagg agtaatggtg
     1081 ctgaagaggt catacggctc ggtggttcaa cttggaggta accatgtgca tctgacagta
     1141 tcaggacccg gcacaatata atatacatgc gcctattcaa ttgtggtaag gaaacgatgg
     1201 catgtatatt taatttgact ttgagattga cttgttttaa attggtcaat gtattactgt
     1261 aacttcttca catcttatag gctgtttact tttttttttt tttttttttt ttttttttgt
     1321 gaatttgtgt ctgtttctat ttgactatgt ttgagaaggg tatttgattt ttatgtctca
     1381 tagaaataga ccaattttca gattcaa
//
LOCUS       XM_071829705            1412 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pre-mRNA splicing factor
            SR-like 1 (LOC139839597), transcript variant X4, mRNA.
ACCESSION   XM_071829705
VERSION     XM_071829705.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1412
                     /gene="LOC139839597"
                     /note="pre-mRNA splicing factor SR-like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839597"
     CDS             221..1126
                     /gene="LOC139839597"
                     /codon_start=1
                     /product="pre-mRNA splicing factor SR-like 1 isoform X3"
                     /protein_id="XP_071685806.1"
                     /db_xref="GeneID:139839597"
                     /translation="MFCKIGFLYLRYAADPKSLWGWFEPYIKDDEEFSPGSNGRMTTM
                     GVYVRDLLLGQYYFDTLFPRIPVPVMRSITANLERLKLPTKHCGVTGESTRGSDDMAR
                     RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPLPSYDRNDNEDSRRSPSRHRSQS
                     RDLSDRDYPERNRDRDHDRYYRKDRDRDRDRDRDRYRDRRHDYDRRSRERSSRDYHRG
                     SSSRRSRSRSRSRSRSRSVFVDRQPSPKREEIKDRTSATSNLAKLKDMYGDLTTENGG
                     ATDGRGPGRSNGAEEVIRLGGSTWR"
     misc_feature    <233..433
                     /gene="LOC139839597"
                     /note="PRP38 family; Region: PRP38; pfam03371"
                     /db_xref="CDD:460901"
     misc_feature    491..748
                     /gene="LOC139839597"
                     /note="Pre-mRNA-splicing factor 38-associated hydrophilic
                     C-term; Region: PRP38_assoc; pfam12871"
                     /db_xref="CDD:463734"
     polyA_site      1412
                     /gene="LOC139839597"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgttaagtgc cataagtttc agttcaaata ttaatacttt gtgtcagtag acatatttag
       61 taattttttt acctgtgcat tgccttttgg attgcatatg ctcgaccttg gttgttaaat
      121 ccgtaacgaa gtttatttgg tagcgctact gtaacctgag tcgtttttgg aatgcaaatt
      181 ttttcatgga tttgactggt atttggttaa aggcttctat atgttttgta agattggatt
      241 tctatacttg aggtatgctg cagatcctaa aagcttgtgg ggctggtttg aaccgtacat
      301 caaggatgat gaggagttct cgcctggatc taatggtagg atgacaacaa tgggcgtcta
      361 cgtgcgggac ctacttcttg gacagtacta ctttgatacg ttgtttcccc gtatccctgt
      421 tccagtaatg cggtcaatta cagcaaacct cgaaagactg aaacttccca ccaaacattg
      481 tggagtaact ggggaatcca cacgtgggtc tgatgacatg gcacgtcgac caccttctgt
      541 taaagcttct ctctcggttt ctttcggtca gcgggcccct catcgtgcat ccacacgaga
      601 ttcctcccct gttcggcgta ctctcccacc tctaccttcc tatgaccgaa acgacaacga
      661 agattctcga agatccccat cccgtcaccg tagccaaagc cgtgatttat ccgatcggga
      721 ttatcctgaa aggaatagag atcgggacca cgaccgttat tatcgaaagg atagagatag
      781 agacagggat agagatagag acaggtatag agataggagg catgattatg atcgaaggtc
      841 cagggaaaga agcagtaggg actaccacag aggatcgagt tctcgtagaa gtcgaagtag
      901 gagtaggagc aggagcagga gccgaagtgt gtttgtggac cgtcaaccaa gtccaaagag
      961 agaagaaata aaagatagaa catctgcaac cagcaaccta gcgaagctta aagacatgta
     1021 tggtgatttg actactgaaa atggtggtgc gactgatggt aggggtcctg gtaggagtaa
     1081 tggtgctgaa gaggtcatac ggctcggtgg ttcaacttgg aggtaaccat gtgcatctga
     1141 cagtatcagg acccggcaca atataatata catgcgccta ttcaattgtg gtaaggaaac
     1201 gatggcatgt atatttaatt tgactttgag attgacttgt tttaaattgg tcaatgtatt
     1261 actgtaactt cttcacatct tataggctgt ttactttttt tttttttttt tttttttttt
     1321 tttgtgaatt tgtgtctgtt tctatttgac tatgtttgag aagggtattt gatttttatg
     1381 tctcatagaa atagaccaat tttcagattc aa
//
LOCUS       XM_071829706            1262 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pre-mRNA splicing factor
            SR-like 1 (LOC139839597), transcript variant X5, mRNA.
ACCESSION   XM_071829706
VERSION     XM_071829706.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1262
                     /gene="LOC139839597"
                     /note="pre-mRNA splicing factor SR-like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839597"
     CDS             191..976
                     /gene="LOC139839597"
                     /codon_start=1
                     /product="pre-mRNA splicing factor SR-like 1 isoform X4"
                     /protein_id="XP_071685807.1"
                     /db_xref="GeneID:139839597"
                     /translation="MTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRSITANLERLKLPT
                     KHCGVTGESTRGSDDMARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPLPSYD
                     RNDNEDSRRSPSRHRSQSRDLSDRDYPERNRDRDHDRYYRKDRDRDRDRDRDRYRDRR
                     HDYDRRSRERSSRDYHRGSSSRRSRSRSRSRSRSRSVFVDRQPSPKREEIKDRTSATS
                     NLAKLKDMYGDLTTENGGATDGRGPGRSNGAEEVIRLGGSTWR"
     misc_feature    <194..283
                     /gene="LOC139839597"
                     /note="PRP38 family; Region: PRP38; pfam03371"
                     /db_xref="CDD:460901"
     polyA_site      1262
                     /gene="LOC139839597"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctattgaagc acccggattc tccgtacatt agagcgattg gatttctata cttgaggtat
       61 gctgcagatc ctaaaagctt gtggggctgg tttgaaccgt acatcaagga tgatgagttc
      121 aggcaataat ggaaggctgt catgcaactg gaagcgtaca taggagttct cgcctggatc
      181 taatggtagg atgacaacaa tgggcgtcta cgtgcgggac ctacttcttg gacagtacta
      241 ctttgatacg ttgtttcccc gtatccctgt tccagtaatg cggtcaatta cagcaaacct
      301 cgaaagactg aaacttccca ccaaacattg tggagtaact ggggaatcca cacgtgggtc
      361 tgatgacatg gcacgtcgac caccttctgt taaagcttct ctctcggttt ctttcggtca
      421 gcgggcccct catcgtgcat ccacacgaga ttcctcccct gttcggcgta ctctcccacc
      481 tctaccttcc tatgaccgaa acgacaacga agattctcga agatccccat cccgtcaccg
      541 tagccaaagc cgtgatttat ccgatcggga ttatcctgaa aggaatagag atcgggacca
      601 cgaccgttat tatcgaaagg atagagatag agacagggat agagatagag acaggtatag
      661 agataggagg catgattatg atcgaaggtc cagggaaaga agcagtaggg actaccacag
      721 aggatcgagt tctcgtagaa gtcgaagtag gagtaggagc aggagcagga gccgaagtgt
      781 gtttgtggac cgtcaaccaa gtccaaagag agaagaaata aaagatagaa catctgcaac
      841 cagcaaccta gcgaagctta aagacatgta tggtgatttg actactgaaa atggtggtgc
      901 gactgatggt aggggtcctg gtaggagtaa tggtgctgaa gaggtcatac ggctcggtgg
      961 ttcaacttgg aggtaaccat gtgcatctga cagtatcagg acccggcaca atataatata
     1021 catgcgccta ttcaattgtg gtaaggaaac gatggcatgt atatttaatt tgactttgag
     1081 attgacttgt tttaaattgg tcaatgtatt actgtaactt cttcacatct tataggctgt
     1141 ttactttttt tttttttttt tttttttttt tttgtgaatt tgtgtctgtt tctatttgac
     1201 tatgtttgag aagggtattt gatttttatg tctcatagaa atagaccaat tttcagattc
     1261 aa
//
LOCUS       XM_071829707            1493 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAC domain containing
            protein 52-like (LOC139839598), mRNA.
ACCESSION   XM_071829707
VERSION     XM_071829707.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1493
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1493
                     /gene="LOC139839598"
                     /note="NAC domain containing protein 52-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839598"
     CDS             111..1316
                     /gene="LOC139839598"
                     /codon_start=1
                     /product="NAC domain containing protein 52-like"
                     /protein_id="XP_071685808.1"
                     /db_xref="GeneID:139839598"
                     /translation="MGHELMAVTSPAAAIPTAAIPAPSPPPTSLAPGFRFHPTDEELV
                     MYYLRRKACGKPFRFQAVTEIDVYKSEPWELADFSSLKTRDQEWYFFSPVDRKYGNGS
                     RLNRATGQGYWKATGKDRFVRHKSETIGMKKTLVFHSGRAPDGKRTNWVMHEYRLLDH
                     ELLRVGVSQDSFVLCRIFQKSGLGPPNGDRYAPFLEEEWSDDAALMVVPGGEADDDLT
                     NGDDTRAEGNDTVQETSAKQILDRTDDPPQTIPFVCKRERTEDDTLNCTLNCEPELET
                     FSLFHNKRIKVTDPNSSNANGSEESTTTSQDPPRAILEFPLLESIEAKESHPQIILPS
                     FDAATLEKSVPPGYLKFISNLENELLNVSMEKETLKIEVMRAQAMIDILQTQIEDLTK
                     ENNKFRTGG"
     misc_feature    204..581
                     /gene="LOC139839598"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
     polyA_site      1493
                     /gene="LOC139839598"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtgtacacca agcatccact gataggttac ttgcttcatc tacaatcttt atcttaattt
       61 aattcaattc aattggattt tctttgttct agatcggcaa aaattgaaag atgggtcatg
      121 aacttatggc cgtaacatct ccggcggcag ctattccgac ggctgctatt ccggcaccat
      181 caccgccgcc gacgtcactt gcacctggat tccgatttca tcccaccgat gaagaacttg
      241 tgatgtatta tttgagaagg aaagcatgtg ggaagccttt taggtttcaa gccgttactg
      301 aaattgatgt ttataaatct gagccatggg aacttgccga cttttcatca ttgaagacga
      361 gagatcaaga atggtacttt ttcagcccag tagataggaa gtatggcaat ggttcccgat
      421 taaatcgtgc tacaggccaa ggctattgga aggcaactgg aaaggaccga tttgtacggc
      481 ataaatcgga gaccataggg atgaagaaaa cacttgtgtt ccatagtggt cgagcccctg
      541 atggaaaacg gactaattgg gttatgcatg agtatcgcct tttggatcat gaacttctac
      601 gtgttggagt atcacaggat tcatttgtgt tatgcaggat atttcaaaag agtgggttag
      661 ggccaccaaa cggggaccgt tatgcaccat ttcttgagga agaatggtcc gatgatgcag
      721 ccttaatggt ggtgcctggt ggggaagcag atgatgattt gaccaacggt gatgatacgc
      781 gtgcagaagg aaacgacact gtgcaggaaa cttctgccaa gcagatcctt gatcgaaccg
      841 atgatccacc acaaaccatt ccatttgttt gcaagagaga aagaacagaa gatgatacat
      901 taaattgtac attaaattgt gaacctgaac tcgaaacgtt ttcacttttt cacaacaaaa
      961 gaataaaagt aactgatcca aactccagca acgcaaacgg ttcagaagag tcaaccacca
     1021 caagtcaaga tccacccaga gcaattttag aattccctct actcgagtca atcgaagcca
     1081 aagaaagtca cccgcaaatc atcttgccgt ctttcgatgc cgcaactctc gaaaagtctg
     1141 ttccacctgg atacttgaag ttcataagta acttagaaaa cgagcttctt aatgtatcaa
     1201 tggaaaaaga gacgttgaag attgaagtga tgcgggccca agccatgatc gatattttgc
     1261 agacgcagat tgaggatttg accaaagaga acaataagtt caggactggt ggctgataat
     1321 aatgtaggta tgtggggtgc tctttttgtg tctgtaacat gttaacttgt aatgttgaga
     1381 aactgttgac ctggctgttg ataatggctt gtgtctgagt ctagttaaat aaacttgtgt
     1441 tcagacttgt atttcagttg gttttttttt ttttttttgt ctttctaata ata
//
LOCUS       XM_071829708            3076 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase SIS8 (LOC139839599), transcript
            variant X1, mRNA.
ACCESSION   XM_071829708
VERSION     XM_071829708.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3076
                     /gene="LOC139839599"
                     /note="probable serine/threonine-protein kinase SIS8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839599"
     CDS             75..2864
                     /gene="LOC139839599"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase SIS8
                     isoform X1"
                     /protein_id="XP_071685809.1"
                     /db_xref="GeneID:139839599"
                     /translation="MKNLLKKLHMMHTTNSNQTWDVDSSSEKSKERLNDVSSSSSPAS
                     GITGWLNSATNRPSPPYSNVKFEDIKSEGRFDSMSSSSTSDATIRVQAAPDSGSINSQ
                     VVEEQEEYHLQLALELSAKEDPEAVQIEAVKQISLESCPPQNTPAQVAYRYWNFGALS
                     YDDKVLDGFYDVYDTSTTVLSSKMPSLLDLQATQVSDNITWEAIVVNKAADAKLLQLE
                     KSALDVTIKSTSECFTFVGQDMVQKLAILVSNYMGGPVGDPDKMLLTWQSFIYKLKTT
                     LGSNVLPLGSLNVGMARHRALLFKVLTDSVGIPCRLVKGKQYTGSIDVAMNIIKFSDG
                     REYIVDLMADPGTLIPSDTSSHVDHDESSMSSSPRSRDDNASRVASSRSGLTTSSEEC
                     LDFGTHDSTKEKSDQEHKKLLPKITKNRKKREKIIGEIPKRPSFNSHARSPSWTEGVS
                     SPEVRKMKVKDVSQYMIDAAKENPQLAQKLHDVLLESGVVAPANLFTEVYDDQSVNST
                     LNKEKNTNWDDRSITTDAHPRFVPILPTHKHTSPQSDANPNRTKVPAAAAAAAAAAVV
                     ASSMVVAATKTTNDPNIQLPVAAAAAAVVATGLPDVINLLDSPTTKGDEREFDNFQTS
                     ENREGDRVSDRSAGNDSIKSEVSLEDVADCEIAWEDITLGERIGLGSYGEVYRGDWHG
                     TEVAVKKFLDQEITVESLEEFKSEVGIMKRVRHPNVVLFMGAVTRAPHLSIVTEFLPR
                     GSLYRLIHRPNNQLDIRRRLRIALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVV
                     KQVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSFGVILWELCTL
                     QQPWGGMNPMQVVGAVGFQHRRLEVPDDVDPAIADIITRCWQTDPRLRPTFADIMAAL
                     KPLQKPITSSRIARE"
     misc_feature    510..1118
                     /gene="LOC139839599"
                     /note="Ethylene-responsive protein kinase Le-CTR1; Region:
                     EDR1; pfam14381"
                     /db_xref="CDD:433922"
     misc_feature    2073..2816
                     /gene="LOC139839599"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(2073..2087,2097..2099,2130..2132,2136..2138,
                     2229..2231,2277..2288,2298..2300,2304..2306,2424..2426,
                     2430..2432,2436..2441,2445..2447,2481..2483,2490..2492,
                     2538..2549)
                     /gene="LOC139839599"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(2073..2087,2097..2099,2130..2132,2136..2138,
                     2229..2231,2277..2288,2298..2300,2424..2426,2430..2432,
                     2436..2441,2445..2447,2481..2483)
                     /gene="LOC139839599"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(2085..2087,2298..2300,2304..2306,2424..2426,
                     2430..2432,2436..2438,2490..2492,2538..2549)
                     /gene="LOC139839599"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(2478..2504,2535..2549)
                     /gene="LOC139839599"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
     polyA_site      3076
                     /gene="LOC139839599"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atatttttta atttgagcta tttcaatttc aattttgatt aaattagaaa gaaatagcta
       61 gttagctagt agaaatgaag aatctgttaa aaaaactaca catgatgcac actactaata
      121 gtaatcaaac ttgggacgtt gactcttcat cagaaaagtc aaaagaaagg ttgaatgatg
      181 tttcatcatc ttcatcacca gcatctggta ttacaggatg gcttaattcg gctacgaatc
      241 gtccatcgcc accttattcg aatgtgaaat ttgaagatat taagagtgaa gggaggtttg
      301 attcaatgag tagtagtagt actagtgatg ctactattag ggttcaggct gcacctgatt
      361 cagggtctat aaattcacaa gttgtagaag aacaagagga gtatcattta cagttggctt
      421 tagagttaag tgcaaaagag gatcctgaag ctgttcagat tgaagctgtt aaacagatca
      481 gtttggagtc atgccctcca caaaatactc cggctcaagt cgcgtatcga tattggaatt
      541 tcggtgctct tagttatgac gataaggtct tggatggatt ctatgatgtg tacgacactt
      601 caacgaccgt tttgtcatca aagatgccgt cccttttgga tttgcaagca actcaagtgt
      661 ccgataatat cacttgggaa gcgattgtgg tcaacaaggc tgcagatgct aagctgctac
      721 aactcgaaaa aagtgcattg gacgttacta tcaagtcgac atcggaatgt tttacttttg
      781 taggtcaaga tatggtgcaa aaacttgcta ttttagtttc taattacatg ggtggacccg
      841 tcggggatcc tgataagatg ttgctgacat ggcaaagttt catttataaa ctgaaaacaa
      901 ctctgggaag caatgtattg cctcttggct cactaaatgt tgggatggca cgtcatcgtg
      961 cgctgctttt caaggttttg actgatagtg ttggcatccc ttgtcgcttg gtgaaaggaa
     1021 agcaatatac cggttctatc gatgtcgcaa tgaacattat taagttcagt gatggaaggg
     1081 aatacattgt tgatctgatg gcagaccccg gaacacttat tccgtctgac acatcatctc
     1141 atgtagatca tgatgaatct tccatgtcat caagtccgcg gtcccgagat gacaatgcat
     1201 ctcgtgtagc ttcttctaga agcggtctta ctacttcatc tgaagaatgc ttagacttcg
     1261 ggacccacga ttctactaaa gagaaatctg atcaagaaca caagaaattg ttacccaaaa
     1321 taaccaagaa tagaaaaaag agggagaaga taataggtga aataccaaaa aggccctcct
     1381 ttaacagcca tgcaagatca ccttcatgga ctgaaggtgt aagttcccct gaagtacgta
     1441 aaatgaaggt aaaagacgtt tcgcaataca tgatcgatgc tgctaaagaa aaccctcaat
     1501 tagcacaaaa attgcacgat gtattactcg aaagtggtgt tgttgctccc gcaaacttgt
     1561 ttaccgaagt ttacgatgat caaagcgtta attctactct aaacaaagaa aaaaacacta
     1621 attgggatga taggtcaata actaccgacg cccatcctcg attcgtaccc attttgccta
     1681 cccataagca tacgtcacca cagtctgatg ccaatccaaa taggacgaaa gttccggcgg
     1741 ccgcggctgc ggcagcagct gctgcggttg ttgcatcgtc tatggtggtt gcggcaacta
     1801 aaactacaaa tgatccaaac atacaactac cggtagcggc ggctgctgct gcggtggttg
     1861 caaccggttt gccagatgtc attaatctac tggactctcc aactacaaag ggtgatgaga
     1921 gagaatttga taattttcaa acgagtgaga atcgagaagg agatcgagtg tccgataggt
     1981 ctgcgggtaa cgatagtatt aaatctgaag tttctcttga agatgtggca gattgtgaga
     2041 ttgcatggga agatattacg ttgggtgagc gtatcggatt gggatcatat ggggaggttt
     2101 atcgtggtga ttggcatgga actgaagttg ctgttaagaa gttcctagat caagaaataa
     2161 ctgttgaatc cctcgaggaa ttcaaaagtg aggtgggtat catgaaaaga gtacggcatc
     2221 cgaatgtggt gctcttcatg ggggccgtaa cacgtgctcc gcatctctca attgtcaccg
     2281 aatttctgcc tagaggtagt ttgtatagat tgatccaccg gcccaacaat caacttgata
     2341 tcagacggcg tttgaggata gctcttgatg ctgcacgtgg tatgaattat ctacacaact
     2401 gcacaccagt tattgttcac cgtgatttga agtccccaaa tctcctagtc gataaaaatt
     2461 gggttgtcaa gcaggtttgt gattttgggt tgtcaaggat gaagcacagt acgttccttt
     2521 catccaggtc taccgcaggg acggccgaat ggatggctcc cgaggtttta cgaaatgaac
     2581 cttcagatga aaagtgtgat gtatacagct ttggtgtaat tttatgggag ctttgtacat
     2641 tgcaacaacc atggggtggg atgaatccga tgcaagttgt tggtgctgtt gggtttcagc
     2701 atcgtcgtct tgaagttccc gatgatgtgg accccgccat tgcagatatt attacaagat
     2761 gttggcaaac agatccaaga ttgcggccta cgtttgctga catcatggct gcgttgaagc
     2821 ctctacaaaa gccaatcact agttcaagaa tcgcacgtga gtagaccttt tggacttgct
     2881 aaattggcaa gccaacattt atgcctctgg atcaactgtt aaaataattg ttgctccaaa
     2941 ttggaatgat agctattttt tttattttta tttttttttc tttttgcttg cttgtgtgac
     3001 actgctttgt aaattatagc aaccattgta aaatagactt tatttctagc caatatatga
     3061 attgatgatt taaaca
//
LOCUS       XM_071829709            3073 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase SIS8 (LOC139839599), transcript
            variant X2, mRNA.
ACCESSION   XM_071829709
VERSION     XM_071829709.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3073
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3073
                     /gene="LOC139839599"
                     /note="probable serine/threonine-protein kinase SIS8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 34 Proteins"
                     /db_xref="GeneID:139839599"
     CDS             75..2861
                     /gene="LOC139839599"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase SIS8
                     isoform X2"
                     /protein_id="XP_071685810.1"
                     /db_xref="GeneID:139839599"
                     /translation="MKNLLKKLHMMHTTNSNQTWDVDSSSEKSKERLNDVSSSSSPAS
                     GITGWLNSATNRPSPPYSNVKFEDIKSEGRFDSMSSSSTSDATIRVQAAPDSGSINSQ
                     VVEEQEEYHLQLALELSAKEDPEAVQIEAVKQISLESCPPQNTPAQVAYRYWNFGALS
                     YDDKVLDGFYDVYDTSTTVLSSKMPSLLDLQATQVSDNITWEAIVVNKAADAKLLQLE
                     KSALDVTIKSTSECFTFVGQDMVQKLAILVSNYMGGPVGDPDKMLLTWQSFIYKLKTT
                     LGSNVLPLGSLNVGMARHRALLFKVLTDSVGIPCRLVKGKQYTGSIDVAMNIIKFSDG
                     REYIVDLMADPGTLIPSDTSSHVDHDESSMSSSPRSRDDNASRVASSRSGLTTSSEEC
                     LDFGTHDSTKEKSDQEHKKLLPKITKNRKKREKIIGEIPKRPSFNSHARSPSWTEGVS
                     SPEVRKMKVKDVSQYMIDAAKENPQLAQKLHDVLLESGVVAPANLFTEVYDDQSVNST
                     LNKEKNTNWDDRSITTDAHPRFVPILPTHKHTSPQSDANPNRTKVPAAAAAAAAAAVV
                     ASSMVVAATKTTNDPNIQLPVAAAAAAVVATGLPDVINLLDSPTTKGDEREFDNFQTS
                     ENREGDRVSDRSAGNDSIKSEVSLEDVADCEIAWEDITLGERIGLGSYGEVYRGDWHG
                     TEVAVKKFLDQEITVESLEEFKSEVGIMKRVRHPNVVLFMGAVTRAPHLSIVTEFLPR
                     GSLYRLIHRPNNQLDIRRRLRIALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVV
                     KVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSFGVILWELCTLQ
                     QPWGGMNPMQVVGAVGFQHRRLEVPDDVDPAIADIITRCWQTDPRLRPTFADIMAALK
                     PLQKPITSSRIARE"
     misc_feature    510..1118
                     /gene="LOC139839599"
                     /note="Ethylene-responsive protein kinase Le-CTR1; Region:
                     EDR1; pfam14381"
                     /db_xref="CDD:433922"
     misc_feature    2073..2813
                     /gene="LOC139839599"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(2073..2087,2097..2099,2130..2132,2136..2138,
                     2229..2231,2277..2288,2298..2300,2304..2306,2424..2426,
                     2430..2432,2436..2441,2445..2447,2478..2480,2487..2489,
                     2535..2546)
                     /gene="LOC139839599"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(2073..2087,2097..2099,2130..2132,2136..2138,
                     2229..2231,2277..2288,2298..2300,2424..2426,2430..2432,
                     2436..2441,2445..2447,2478..2480)
                     /gene="LOC139839599"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(2085..2087,2298..2300,2304..2306,2424..2426,
                     2430..2432,2436..2438,2487..2489,2535..2546)
                     /gene="LOC139839599"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(2475..2501,2532..2546)
                     /gene="LOC139839599"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
     polyA_site      3073
                     /gene="LOC139839599"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atatttttta atttgagcta tttcaatttc aattttgatt aaattagaaa gaaatagcta
       61 gttagctagt agaaatgaag aatctgttaa aaaaactaca catgatgcac actactaata
      121 gtaatcaaac ttgggacgtt gactcttcat cagaaaagtc aaaagaaagg ttgaatgatg
      181 tttcatcatc ttcatcacca gcatctggta ttacaggatg gcttaattcg gctacgaatc
      241 gtccatcgcc accttattcg aatgtgaaat ttgaagatat taagagtgaa gggaggtttg
      301 attcaatgag tagtagtagt actagtgatg ctactattag ggttcaggct gcacctgatt
      361 cagggtctat aaattcacaa gttgtagaag aacaagagga gtatcattta cagttggctt
      421 tagagttaag tgcaaaagag gatcctgaag ctgttcagat tgaagctgtt aaacagatca
      481 gtttggagtc atgccctcca caaaatactc cggctcaagt cgcgtatcga tattggaatt
      541 tcggtgctct tagttatgac gataaggtct tggatggatt ctatgatgtg tacgacactt
      601 caacgaccgt tttgtcatca aagatgccgt cccttttgga tttgcaagca actcaagtgt
      661 ccgataatat cacttgggaa gcgattgtgg tcaacaaggc tgcagatgct aagctgctac
      721 aactcgaaaa aagtgcattg gacgttacta tcaagtcgac atcggaatgt tttacttttg
      781 taggtcaaga tatggtgcaa aaacttgcta ttttagtttc taattacatg ggtggacccg
      841 tcggggatcc tgataagatg ttgctgacat ggcaaagttt catttataaa ctgaaaacaa
      901 ctctgggaag caatgtattg cctcttggct cactaaatgt tgggatggca cgtcatcgtg
      961 cgctgctttt caaggttttg actgatagtg ttggcatccc ttgtcgcttg gtgaaaggaa
     1021 agcaatatac cggttctatc gatgtcgcaa tgaacattat taagttcagt gatggaaggg
     1081 aatacattgt tgatctgatg gcagaccccg gaacacttat tccgtctgac acatcatctc
     1141 atgtagatca tgatgaatct tccatgtcat caagtccgcg gtcccgagat gacaatgcat
     1201 ctcgtgtagc ttcttctaga agcggtctta ctacttcatc tgaagaatgc ttagacttcg
     1261 ggacccacga ttctactaaa gagaaatctg atcaagaaca caagaaattg ttacccaaaa
     1321 taaccaagaa tagaaaaaag agggagaaga taataggtga aataccaaaa aggccctcct
     1381 ttaacagcca tgcaagatca ccttcatgga ctgaaggtgt aagttcccct gaagtacgta
     1441 aaatgaaggt aaaagacgtt tcgcaataca tgatcgatgc tgctaaagaa aaccctcaat
     1501 tagcacaaaa attgcacgat gtattactcg aaagtggtgt tgttgctccc gcaaacttgt
     1561 ttaccgaagt ttacgatgat caaagcgtta attctactct aaacaaagaa aaaaacacta
     1621 attgggatga taggtcaata actaccgacg cccatcctcg attcgtaccc attttgccta
     1681 cccataagca tacgtcacca cagtctgatg ccaatccaaa taggacgaaa gttccggcgg
     1741 ccgcggctgc ggcagcagct gctgcggttg ttgcatcgtc tatggtggtt gcggcaacta
     1801 aaactacaaa tgatccaaac atacaactac cggtagcggc ggctgctgct gcggtggttg
     1861 caaccggttt gccagatgtc attaatctac tggactctcc aactacaaag ggtgatgaga
     1921 gagaatttga taattttcaa acgagtgaga atcgagaagg agatcgagtg tccgataggt
     1981 ctgcgggtaa cgatagtatt aaatctgaag tttctcttga agatgtggca gattgtgaga
     2041 ttgcatggga agatattacg ttgggtgagc gtatcggatt gggatcatat ggggaggttt
     2101 atcgtggtga ttggcatgga actgaagttg ctgttaagaa gttcctagat caagaaataa
     2161 ctgttgaatc cctcgaggaa ttcaaaagtg aggtgggtat catgaaaaga gtacggcatc
     2221 cgaatgtggt gctcttcatg ggggccgtaa cacgtgctcc gcatctctca attgtcaccg
     2281 aatttctgcc tagaggtagt ttgtatagat tgatccaccg gcccaacaat caacttgata
     2341 tcagacggcg tttgaggata gctcttgatg ctgcacgtgg tatgaattat ctacacaact
     2401 gcacaccagt tattgttcac cgtgatttga agtccccaaa tctcctagtc gataaaaatt
     2461 gggttgtcaa ggtttgtgat tttgggttgt caaggatgaa gcacagtacg ttcctttcat
     2521 ccaggtctac cgcagggacg gccgaatgga tggctcccga ggttttacga aatgaacctt
     2581 cagatgaaaa gtgtgatgta tacagctttg gtgtaatttt atgggagctt tgtacattgc
     2641 aacaaccatg gggtgggatg aatccgatgc aagttgttgg tgctgttggg tttcagcatc
     2701 gtcgtcttga agttcccgat gatgtggacc ccgccattgc agatattatt acaagatgtt
     2761 ggcaaacaga tccaagattg cggcctacgt ttgctgacat catggctgcg ttgaagcctc
     2821 tacaaaagcc aatcactagt tcaagaatcg cacgtgagta gaccttttgg acttgctaaa
     2881 ttggcaagcc aacatttatg cctctggatc aactgttaaa ataattgttg ctccaaattg
     2941 gaatgatagc tatttttttt atttttattt ttttttcttt ttgcttgctt gtgtgacact
     3001 gctttgtaaa ttatagcaac cattgtaaaa tagactttat ttctagccaa tatatgaatt
     3061 gatgatttaa aca
//
LOCUS       XM_071829710            2736 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase SIS8 (LOC139839599), transcript
            variant X3, mRNA.
ACCESSION   XM_071829710
VERSION     XM_071829710.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2736
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2736
                     /gene="LOC139839599"
                     /note="probable serine/threonine-protein kinase SIS8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839599"
     CDS             75..2582
                     /gene="LOC139839599"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase SIS8
                     isoform X3"
                     /protein_id="XP_071685811.1"
                     /db_xref="GeneID:139839599"
                     /translation="MKNLLKKLHMMHTTNSNQTWDVDSSSEKSKERLNDVSSSSSPAS
                     GITGWLNSATNRPSPPYSNVKFEDIKSEGRFDSMSSSSTSDATIRVQAAPDSGSINSQ
                     VVEEQEEYHLQLALELSAKEDPEAVQIEAVKQISLESCPPQNTPAQVAYRYWNFGALS
                     YDDKVLDGFYDVYDTSTTVLSSKMPSLLDLQATQVSDNITWEAIVVNKAADAKLLQLE
                     KSALDVTIKSTSECFTFVGQDMVQKLAILVSNYMGGPVGDPDKMLLTWQSFIYKLKTT
                     LGSNVLPLGSLNVGMARHRALLFKVLTDSVGIPCRLVKGKQYTGSIDVAMNIIKFSDG
                     REYIVDLMADPGTLIPSDTSSHVDHDESSMSSSPRSRDDNASRVASSRSGLTTSSEEC
                     LDFGTHDSTKEKSDQEHKKLLPKITKNRKKREKIIGEIPKRPSFNSHARSPSWTEGVS
                     SPEVRKMKVKDVSQYMIDAAKENPQLAQKLHDVLLESGVVAPANLFTEVYDDQSVNST
                     LNKEKNTNWDDRSITTDAHPRFVPILPTHKHTSPQSDANPNRTKVPAAAAAAAAAAVV
                     ASSMVVAATKTTNDPNIQLPVAAAAAAVVATGLPDVINLLDSPTTKGDEREFDNFQTS
                     ENREGDRVSDRSAGNDSIKSEVSLEDVADCEIAWEDITLGERIGLGSYGEVYRGDWHG
                     TEVAVKKFLDQEITVESLEEFKSEVGIMKRVRHPNVVLFMGAVTRAPHLSIVTEFLPR
                     GSLYRLIHRPNNQLDIRRRLRIALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVV
                     KQVCDFGLSRMKHSTFLSSRSTAGTVCRMDGSRGFTK"
     misc_feature    510..1118
                     /gene="LOC139839599"
                     /note="Ethylene-responsive protein kinase Le-CTR1; Region:
                     EDR1; pfam14381"
                     /db_xref="CDD:433922"
     misc_feature    2073..>2555
                     /gene="LOC139839599"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2073..2084,2091..2093,2097..2099,2130..2132,
                     2136..2138,2229..2231,2277..2288,2424..2426,2436..2441,
                     2445..2447,2478..2483)
                     /gene="LOC139839599"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atatttttta atttgagcta tttcaatttc aattttgatt aaattagaaa gaaatagcta
       61 gttagctagt agaaatgaag aatctgttaa aaaaactaca catgatgcac actactaata
      121 gtaatcaaac ttgggacgtt gactcttcat cagaaaagtc aaaagaaagg ttgaatgatg
      181 tttcatcatc ttcatcacca gcatctggta ttacaggatg gcttaattcg gctacgaatc
      241 gtccatcgcc accttattcg aatgtgaaat ttgaagatat taagagtgaa gggaggtttg
      301 attcaatgag tagtagtagt actagtgatg ctactattag ggttcaggct gcacctgatt
      361 cagggtctat aaattcacaa gttgtagaag aacaagagga gtatcattta cagttggctt
      421 tagagttaag tgcaaaagag gatcctgaag ctgttcagat tgaagctgtt aaacagatca
      481 gtttggagtc atgccctcca caaaatactc cggctcaagt cgcgtatcga tattggaatt
      541 tcggtgctct tagttatgac gataaggtct tggatggatt ctatgatgtg tacgacactt
      601 caacgaccgt tttgtcatca aagatgccgt cccttttgga tttgcaagca actcaagtgt
      661 ccgataatat cacttgggaa gcgattgtgg tcaacaaggc tgcagatgct aagctgctac
      721 aactcgaaaa aagtgcattg gacgttacta tcaagtcgac atcggaatgt tttacttttg
      781 taggtcaaga tatggtgcaa aaacttgcta ttttagtttc taattacatg ggtggacccg
      841 tcggggatcc tgataagatg ttgctgacat ggcaaagttt catttataaa ctgaaaacaa
      901 ctctgggaag caatgtattg cctcttggct cactaaatgt tgggatggca cgtcatcgtg
      961 cgctgctttt caaggttttg actgatagtg ttggcatccc ttgtcgcttg gtgaaaggaa
     1021 agcaatatac cggttctatc gatgtcgcaa tgaacattat taagttcagt gatggaaggg
     1081 aatacattgt tgatctgatg gcagaccccg gaacacttat tccgtctgac acatcatctc
     1141 atgtagatca tgatgaatct tccatgtcat caagtccgcg gtcccgagat gacaatgcat
     1201 ctcgtgtagc ttcttctaga agcggtctta ctacttcatc tgaagaatgc ttagacttcg
     1261 ggacccacga ttctactaaa gagaaatctg atcaagaaca caagaaattg ttacccaaaa
     1321 taaccaagaa tagaaaaaag agggagaaga taataggtga aataccaaaa aggccctcct
     1381 ttaacagcca tgcaagatca ccttcatgga ctgaaggtgt aagttcccct gaagtacgta
     1441 aaatgaaggt aaaagacgtt tcgcaataca tgatcgatgc tgctaaagaa aaccctcaat
     1501 tagcacaaaa attgcacgat gtattactcg aaagtggtgt tgttgctccc gcaaacttgt
     1561 ttaccgaagt ttacgatgat caaagcgtta attctactct aaacaaagaa aaaaacacta
     1621 attgggatga taggtcaata actaccgacg cccatcctcg attcgtaccc attttgccta
     1681 cccataagca tacgtcacca cagtctgatg ccaatccaaa taggacgaaa gttccggcgg
     1741 ccgcggctgc ggcagcagct gctgcggttg ttgcatcgtc tatggtggtt gcggcaacta
     1801 aaactacaaa tgatccaaac atacaactac cggtagcggc ggctgctgct gcggtggttg
     1861 caaccggttt gccagatgtc attaatctac tggactctcc aactacaaag ggtgatgaga
     1921 gagaatttga taattttcaa acgagtgaga atcgagaagg agatcgagtg tccgataggt
     1981 ctgcgggtaa cgatagtatt aaatctgaag tttctcttga agatgtggca gattgtgaga
     2041 ttgcatggga agatattacg ttgggtgagc gtatcggatt gggatcatat ggggaggttt
     2101 atcgtggtga ttggcatgga actgaagttg ctgttaagaa gttcctagat caagaaataa
     2161 ctgttgaatc cctcgaggaa ttcaaaagtg aggtgggtat catgaaaaga gtacggcatc
     2221 cgaatgtggt gctcttcatg ggggccgtaa cacgtgctcc gcatctctca attgtcaccg
     2281 aatttctgcc tagaggtagt ttgtatagat tgatccaccg gcccaacaat caacttgata
     2341 tcagacggcg tttgaggata gctcttgatg ctgcacgtgg tatgaattat ctacacaact
     2401 gcacaccagt tattgttcac cgtgatttga agtccccaaa tctcctagtc gataaaaatt
     2461 gggttgtcaa gcaggtttgt gattttgggt tgtcaaggat gaagcacagt acgttccttt
     2521 catccaggtc taccgcaggg acggtatgcc gaatggatgg ctcccgaggt tttacgaaat
     2581 gaaccttcag atgaaaagtg tgatgtatac agctttggtg taattttatg ggagctttgt
     2641 acattgcaac aaccatgggg tgggatgaat ccgatgcaag ttgttggtgc tgttgggttt
     2701 cagcatcgtc gtcttgaagt tcccgatgat gtggac
//
LOCUS       XM_071829711            2733 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase SIS8 (LOC139839599), transcript
            variant X4, mRNA.
ACCESSION   XM_071829711
VERSION     XM_071829711.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2733
                     /gene="LOC139839599"
                     /note="probable serine/threonine-protein kinase SIS8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839599"
     CDS             75..2579
                     /gene="LOC139839599"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase SIS8
                     isoform X4"
                     /protein_id="XP_071685812.1"
                     /db_xref="GeneID:139839599"
                     /translation="MKNLLKKLHMMHTTNSNQTWDVDSSSEKSKERLNDVSSSSSPAS
                     GITGWLNSATNRPSPPYSNVKFEDIKSEGRFDSMSSSSTSDATIRVQAAPDSGSINSQ
                     VVEEQEEYHLQLALELSAKEDPEAVQIEAVKQISLESCPPQNTPAQVAYRYWNFGALS
                     YDDKVLDGFYDVYDTSTTVLSSKMPSLLDLQATQVSDNITWEAIVVNKAADAKLLQLE
                     KSALDVTIKSTSECFTFVGQDMVQKLAILVSNYMGGPVGDPDKMLLTWQSFIYKLKTT
                     LGSNVLPLGSLNVGMARHRALLFKVLTDSVGIPCRLVKGKQYTGSIDVAMNIIKFSDG
                     REYIVDLMADPGTLIPSDTSSHVDHDESSMSSSPRSRDDNASRVASSRSGLTTSSEEC
                     LDFGTHDSTKEKSDQEHKKLLPKITKNRKKREKIIGEIPKRPSFNSHARSPSWTEGVS
                     SPEVRKMKVKDVSQYMIDAAKENPQLAQKLHDVLLESGVVAPANLFTEVYDDQSVNST
                     LNKEKNTNWDDRSITTDAHPRFVPILPTHKHTSPQSDANPNRTKVPAAAAAAAAAAVV
                     ASSMVVAATKTTNDPNIQLPVAAAAAAVVATGLPDVINLLDSPTTKGDEREFDNFQTS
                     ENREGDRVSDRSAGNDSIKSEVSLEDVADCEIAWEDITLGERIGLGSYGEVYRGDWHG
                     TEVAVKKFLDQEITVESLEEFKSEVGIMKRVRHPNVVLFMGAVTRAPHLSIVTEFLPR
                     GSLYRLIHRPNNQLDIRRRLRIALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVV
                     KVCDFGLSRMKHSTFLSSRSTAGTVCRMDGSRGFTK"
     misc_feature    510..1118
                     /gene="LOC139839599"
                     /note="Ethylene-responsive protein kinase Le-CTR1; Region:
                     EDR1; pfam14381"
                     /db_xref="CDD:433922"
     misc_feature    2073..>2552
                     /gene="LOC139839599"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(2073..2087,2097..2099,2130..2132,2136..2138,
                     2229..2231,2277..2288,2298..2300,2304..2306,2424..2426,
                     2430..2432,2436..2441,2445..2447,2478..2480,2487..2489,
                     2535..2546)
                     /gene="LOC139839599"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(2073..2087,2097..2099,2130..2132,2136..2138,
                     2229..2231,2277..2288,2298..2300,2424..2426,2430..2432,
                     2436..2441,2445..2447,2478..2480)
                     /gene="LOC139839599"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(2085..2087,2298..2300,2304..2306,2424..2426,
                     2430..2432,2436..2438,2487..2489,2535..2546)
                     /gene="LOC139839599"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(2475..2501,2532..2546)
                     /gene="LOC139839599"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
ORIGIN      
        1 atatttttta atttgagcta tttcaatttc aattttgatt aaattagaaa gaaatagcta
       61 gttagctagt agaaatgaag aatctgttaa aaaaactaca catgatgcac actactaata
      121 gtaatcaaac ttgggacgtt gactcttcat cagaaaagtc aaaagaaagg ttgaatgatg
      181 tttcatcatc ttcatcacca gcatctggta ttacaggatg gcttaattcg gctacgaatc
      241 gtccatcgcc accttattcg aatgtgaaat ttgaagatat taagagtgaa gggaggtttg
      301 attcaatgag tagtagtagt actagtgatg ctactattag ggttcaggct gcacctgatt
      361 cagggtctat aaattcacaa gttgtagaag aacaagagga gtatcattta cagttggctt
      421 tagagttaag tgcaaaagag gatcctgaag ctgttcagat tgaagctgtt aaacagatca
      481 gtttggagtc atgccctcca caaaatactc cggctcaagt cgcgtatcga tattggaatt
      541 tcggtgctct tagttatgac gataaggtct tggatggatt ctatgatgtg tacgacactt
      601 caacgaccgt tttgtcatca aagatgccgt cccttttgga tttgcaagca actcaagtgt
      661 ccgataatat cacttgggaa gcgattgtgg tcaacaaggc tgcagatgct aagctgctac
      721 aactcgaaaa aagtgcattg gacgttacta tcaagtcgac atcggaatgt tttacttttg
      781 taggtcaaga tatggtgcaa aaacttgcta ttttagtttc taattacatg ggtggacccg
      841 tcggggatcc tgataagatg ttgctgacat ggcaaagttt catttataaa ctgaaaacaa
      901 ctctgggaag caatgtattg cctcttggct cactaaatgt tgggatggca cgtcatcgtg
      961 cgctgctttt caaggttttg actgatagtg ttggcatccc ttgtcgcttg gtgaaaggaa
     1021 agcaatatac cggttctatc gatgtcgcaa tgaacattat taagttcagt gatggaaggg
     1081 aatacattgt tgatctgatg gcagaccccg gaacacttat tccgtctgac acatcatctc
     1141 atgtagatca tgatgaatct tccatgtcat caagtccgcg gtcccgagat gacaatgcat
     1201 ctcgtgtagc ttcttctaga agcggtctta ctacttcatc tgaagaatgc ttagacttcg
     1261 ggacccacga ttctactaaa gagaaatctg atcaagaaca caagaaattg ttacccaaaa
     1321 taaccaagaa tagaaaaaag agggagaaga taataggtga aataccaaaa aggccctcct
     1381 ttaacagcca tgcaagatca ccttcatgga ctgaaggtgt aagttcccct gaagtacgta
     1441 aaatgaaggt aaaagacgtt tcgcaataca tgatcgatgc tgctaaagaa aaccctcaat
     1501 tagcacaaaa attgcacgat gtattactcg aaagtggtgt tgttgctccc gcaaacttgt
     1561 ttaccgaagt ttacgatgat caaagcgtta attctactct aaacaaagaa aaaaacacta
     1621 attgggatga taggtcaata actaccgacg cccatcctcg attcgtaccc attttgccta
     1681 cccataagca tacgtcacca cagtctgatg ccaatccaaa taggacgaaa gttccggcgg
     1741 ccgcggctgc ggcagcagct gctgcggttg ttgcatcgtc tatggtggtt gcggcaacta
     1801 aaactacaaa tgatccaaac atacaactac cggtagcggc ggctgctgct gcggtggttg
     1861 caaccggttt gccagatgtc attaatctac tggactctcc aactacaaag ggtgatgaga
     1921 gagaatttga taattttcaa acgagtgaga atcgagaagg agatcgagtg tccgataggt
     1981 ctgcgggtaa cgatagtatt aaatctgaag tttctcttga agatgtggca gattgtgaga
     2041 ttgcatggga agatattacg ttgggtgagc gtatcggatt gggatcatat ggggaggttt
     2101 atcgtggtga ttggcatgga actgaagttg ctgttaagaa gttcctagat caagaaataa
     2161 ctgttgaatc cctcgaggaa ttcaaaagtg aggtgggtat catgaaaaga gtacggcatc
     2221 cgaatgtggt gctcttcatg ggggccgtaa cacgtgctcc gcatctctca attgtcaccg
     2281 aatttctgcc tagaggtagt ttgtatagat tgatccaccg gcccaacaat caacttgata
     2341 tcagacggcg tttgaggata gctcttgatg ctgcacgtgg tatgaattat ctacacaact
     2401 gcacaccagt tattgttcac cgtgatttga agtccccaaa tctcctagtc gataaaaatt
     2461 gggttgtcaa ggtttgtgat tttgggttgt caaggatgaa gcacagtacg ttcctttcat
     2521 ccaggtctac cgcagggacg gtatgccgaa tggatggctc ccgaggtttt acgaaatgaa
     2581 ccttcagatg aaaagtgtga tgtatacagc tttggtgtaa ttttatggga gctttgtaca
     2641 ttgcaacaac catggggtgg gatgaatccg atgcaagttg ttggtgctgt tgggtttcag
     2701 catcgtcgtc ttgaagttcc cgatgatgtg gac
//
LOCUS       XM_071829712            2749 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase SIS8 (LOC139839599), transcript
            variant X5, mRNA.
ACCESSION   XM_071829712
VERSION     XM_071829712.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2749
                     /gene="LOC139839599"
                     /note="probable serine/threonine-protein kinase SIS8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839599"
     CDS             144..2537
                     /gene="LOC139839599"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase SIS8
                     isoform X5"
                     /protein_id="XP_071685813.1"
                     /db_xref="GeneID:139839599"
                     /translation="MPSTKYSGSSRVSILDTFITSQNFGALSYDDKVLDGFYDVYDTS
                     TTVLSSKMPSLLDLQATQVSDNITWEAIVVNKAADAKLLQLEKSALDVTIKSTSECFT
                     FVGQDMVQKLAILVSNYMGGPVGDPDKMLLTWQSFIYKLKTTLGSNVLPLGSLNVGMA
                     RHRALLFKVLTDSVGIPCRLVKGKQYTGSIDVAMNIIKFSDGREYIVDLMADPGTLIP
                     SDTSSHVDHDESSMSSSPRSRDDNASRVASSRSGLTTSSEECLDFGTHDSTKEKSDQE
                     HKKLLPKITKNRKKREKIIGEIPKRPSFNSHARSPSWTEGVSSPEVRKMKVKDVSQYM
                     IDAAKENPQLAQKLHDVLLESGVVAPANLFTEVYDDQSVNSTLNKEKNTNWDDRSITT
                     DAHPRFVPILPTHKHTSPQSDANPNRTKVPAAAAAAAAAAVVASSMVVAATKTTNDPN
                     IQLPVAAAAAAVVATGLPDVINLLDSPTTKGDEREFDNFQTSENREGDRVSDRSAGND
                     SIKSEVSLEDVADCEIAWEDITLGERIGLGSYGEVYRGDWHGTEVAVKKFLDQEITVE
                     SLEEFKSEVGIMKRVRHPNVVLFMGAVTRAPHLSIVTEFLPRGSLYRLIHRPNNQLDI
                     RRRLRIALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKQVCDFGLSRMKHSTF
                     LSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSFGVILWELCTLQQPWGGMNPMQVVGAV
                     GFQHRRLEVPDDVDPAIADIITRCWQTDPRLRPTFADIMAALKPLQKPITSSRIARE"
     misc_feature    210..791
                     /gene="LOC139839599"
                     /note="Ethylene-responsive protein kinase Le-CTR1; Region:
                     EDR1; pfam14381"
                     /db_xref="CDD:433922"
     misc_feature    1746..2489
                     /gene="LOC139839599"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(1746..1760,1770..1772,1803..1805,1809..1811,
                     1902..1904,1950..1961,1971..1973,1977..1979,2097..2099,
                     2103..2105,2109..2114,2118..2120,2154..2156,2163..2165,
                     2211..2222)
                     /gene="LOC139839599"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(1746..1760,1770..1772,1803..1805,1809..1811,
                     1902..1904,1950..1961,1971..1973,2097..2099,2103..2105,
                     2109..2114,2118..2120,2154..2156)
                     /gene="LOC139839599"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1758..1760,1971..1973,1977..1979,2097..2099,
                     2103..2105,2109..2111,2163..2165,2211..2222)
                     /gene="LOC139839599"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(2151..2177,2208..2222)
                     /gene="LOC139839599"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
     polyA_site      2749
                     /gene="LOC139839599"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gctgcacctg attcagggtc tataaattca caagttgtag aagaacaaga ggagtatcat
       61 ttacagttgg ctttagagtt aagtgcaaaa gaggatcctg aagctgttca gattgaagct
      121 gttaaacaga tcagtttgga gtcatgccct ccacaaaata ctccggctca agtcgcgtat
      181 cgatattgga cacgttcata acttcacaga atttcggtgc tcttagttat gacgataagg
      241 tcttggatgg attctatgat gtgtacgaca cttcaacgac cgttttgtca tcaaagatgc
      301 cgtccctttt ggatttgcaa gcaactcaag tgtccgataa tatcacttgg gaagcgattg
      361 tggtcaacaa ggctgcagat gctaagctgc tacaactcga aaaaagtgca ttggacgtta
      421 ctatcaagtc gacatcggaa tgttttactt ttgtaggtca agatatggtg caaaaacttg
      481 ctattttagt ttctaattac atgggtggac ccgtcgggga tcctgataag atgttgctga
      541 catggcaaag tttcatttat aaactgaaaa caactctggg aagcaatgta ttgcctcttg
      601 gctcactaaa tgttgggatg gcacgtcatc gtgcgctgct tttcaaggtt ttgactgata
      661 gtgttggcat cccttgtcgc ttggtgaaag gaaagcaata taccggttct atcgatgtcg
      721 caatgaacat tattaagttc agtgatggaa gggaatacat tgttgatctg atggcagacc
      781 ccggaacact tattccgtct gacacatcat ctcatgtaga tcatgatgaa tcttccatgt
      841 catcaagtcc gcggtcccga gatgacaatg catctcgtgt agcttcttct agaagcggtc
      901 ttactacttc atctgaagaa tgcttagact tcgggaccca cgattctact aaagagaaat
      961 ctgatcaaga acacaagaaa ttgttaccca aaataaccaa gaatagaaaa aagagggaga
     1021 agataatagg tgaaatacca aaaaggccct cctttaacag ccatgcaaga tcaccttcat
     1081 ggactgaagg tgtaagttcc cctgaagtac gtaaaatgaa ggtaaaagac gtttcgcaat
     1141 acatgatcga tgctgctaaa gaaaaccctc aattagcaca aaaattgcac gatgtattac
     1201 tcgaaagtgg tgttgttgct cccgcaaact tgtttaccga agtttacgat gatcaaagcg
     1261 ttaattctac tctaaacaaa gaaaaaaaca ctaattggga tgataggtca ataactaccg
     1321 acgcccatcc tcgattcgta cccattttgc ctacccataa gcatacgtca ccacagtctg
     1381 atgccaatcc aaataggacg aaagttccgg cggccgcggc tgcggcagca gctgctgcgg
     1441 ttgttgcatc gtctatggtg gttgcggcaa ctaaaactac aaatgatcca aacatacaac
     1501 taccggtagc ggcggctgct gctgcggtgg ttgcaaccgg tttgccagat gtcattaatc
     1561 tactggactc tccaactaca aagggtgatg agagagaatt tgataatttt caaacgagtg
     1621 agaatcgaga aggagatcga gtgtccgata ggtctgcggg taacgatagt attaaatctg
     1681 aagtttctct tgaagatgtg gcagattgtg agattgcatg ggaagatatt acgttgggtg
     1741 agcgtatcgg attgggatca tatggggagg tttatcgtgg tgattggcat ggaactgaag
     1801 ttgctgttaa gaagttccta gatcaagaaa taactgttga atccctcgag gaattcaaaa
     1861 gtgaggtggg tatcatgaaa agagtacggc atccgaatgt ggtgctcttc atgggggccg
     1921 taacacgtgc tccgcatctc tcaattgtca ccgaatttct gcctagaggt agtttgtata
     1981 gattgatcca ccggcccaac aatcaacttg atatcagacg gcgtttgagg atagctcttg
     2041 atgctgcacg tggtatgaat tatctacaca actgcacacc agttattgtt caccgtgatt
     2101 tgaagtcccc aaatctccta gtcgataaaa attgggttgt caagcaggtt tgtgattttg
     2161 ggttgtcaag gatgaagcac agtacgttcc tttcatccag gtctaccgca gggacggccg
     2221 aatggatggc tcccgaggtt ttacgaaatg aaccttcaga tgaaaagtgt gatgtataca
     2281 gctttggtgt aattttatgg gagctttgta cattgcaaca accatggggt gggatgaatc
     2341 cgatgcaagt tgttggtgct gttgggtttc agcatcgtcg tcttgaagtt cccgatgatg
     2401 tggaccccgc cattgcagat attattacaa gatgttggca aacagatcca agattgcggc
     2461 ctacgtttgc tgacatcatg gctgcgttga agcctctaca aaagccaatc actagttcaa
     2521 gaatcgcacg tgagtagacc ttttggactt gctaaattgg caagccaaca tttatgcctc
     2581 tggatcaact gttaaaataa ttgttgctcc aaattggaat gatagctatt ttttttattt
     2641 ttattttttt ttctttttgc ttgcttgtgt gacactgctt tgtaaattat agcaaccatt
     2701 gtaaaataga ctttatttct agccaatata tgaattgatg atttaaaca
//
LOCUS       XM_071829713             574 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone H2B-like
            (LOC139839600), mRNA.
ACCESSION   XM_071829713
VERSION     XM_071829713.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..574
                     /gene="LOC139839600"
                     /note="histone H2B-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 70
                     Proteins"
                     /db_xref="GeneID:139839600"
     CDS             36..458
                     /gene="LOC139839600"
                     /codon_start=1
                     /product="histone H2B-like"
                     /protein_id="XP_071685814.1"
                     /db_xref="GeneID:139839600"
                     /translation="MAPKAEKKPAAEKKPAAEKTPAEKKPRAEKKIPKDASSTDKKKK
                     RHKKSVETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQEASRLGRYNKK
                     HTLSSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA"
     misc_feature    186..449
                     /gene="LOC139839600"
                     /note="histone-fold domain found in histone H2B and
                     similar proteins; Region: HFD_H2B; cd22910"
                     /db_xref="CDD:467035"
     misc_feature    order(186..188,192..194,198..206,210..218,225..248,
                     252..257,264..269,276..281,285..293,297..305,315..317,
                     345..350,354..356,363..368,375..377,384..392,399..401,
                     408..416,420..425,432..437,444..449)
                     /gene="LOC139839600"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467035"
     misc_feature    order(195..203,207..212,219..227,240..248,258..260,
                     366..368,378..380,405..410,414..419,426..431,435..440,
                     447..449)
                     /gene="LOC139839600"
                     /note="Hif1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467035"
     misc_feature    order(264..266,273..278,282..287,294..296,309..311,
                     318..320,327..335,357..362,369..371,381..386)
                     /gene="LOC139839600"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467035"
     polyA_site      574
                     /gene="LOC139839600"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctccttttc cttcacacaa aacaacagca aaataatggc accaaaagca gagaagaagc
       61 cggcagccga gaagaaaccg gcggcagaaa aaactccggc ggagaagaag ccacgcgccg
      121 agaagaagat tccaaaagac gcatcgtcaa ccgacaagaa gaagaagagg cacaagaagt
      181 ctgtagagac ttacaagatc tacatattca aggtgttgaa gcaagttcat ccagatattg
      241 gtatttctgg taaagcaatg gggattatga actcttttat taatgatatt tttgagaaac
      301 ttgctcagga agcttctaga ctcggtaggt ataacaagaa gcacacgctt tcgtcacgtg
      361 agattcagac tgccgtgaga cttgtacttc caggtgaact tgcgaaacat gccgtttctg
      421 aagggactaa agctgtcact aagtttacaa gtgcttgaat tgtgttttaa ttttaagtat
      481 tttagggttt caattgtgaa atttaagact tgtattgtaa gtgaatgtaa tgtaatgtga
      541 ccgaaatcaa tttatcgaat tttagttttt ggca
//
LOCUS       XR_011756988            1240 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839602), ncRNA.
ACCESSION   XR_011756988
VERSION     XR_011756988.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1240
                     /gene="LOC139839602"
                     /note="uncharacterized LOC139839602; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839602"
     ncRNA           1..1240
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839602"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839602"
ORIGIN      
        1 gagtccaacg ttactctcat ctatccatgt cccatctttc atactttttt cgtataattc
       61 aattacaatt tgagaaatat attgacgatt tgagcagatc tacgagtttg accgccgttg
      121 atctgcggtt gaccgagaaa tagggtttga gaactcggcg agccagtaga aacgagatct
      181 cgcttgagat ttcgagattt acaaccttgt gtttaagttc atagcgtcgt ccgagttgga
      241 catccaacac cattaacggg aaaaaatatc tgactatttg agccgatttg tctgtcatat
      301 tgagagttca aattcaaagt aactattttt ctaggcgagc ggtttgacta gagatagtca
      361 tgggagaaca cttggcgaca tccttccatt ctagattcat gggtactgtt gattttattt
      421 ggtatgttga atgtaatctt attgacaatt gaaatattga agaaaacagg agggctcccg
      481 agtaaggtac ataaatataa catatgtaca cctctttact gtactctata tttctccaca
      541 catcaaataa atgagcagtt tcgctcaata taaataggat tccaccaaat gagatattat
      601 aatgaaactg ggcgcgaaca atttaggatg gacacatttc tattagctta tgaagtgagt
      661 ttccactctc acgaatttgt tgtttctatg cccgtatatg tctcgctgat tatattctgc
      721 ctggtatttg aaattggtta tactaattac tctgttccag gaccattttt cttgtactcg
      781 tagtagtata tgttcaagtg aaatgttcct cttccatttt gtcttgtctg aaatcgctct
      841 taagaagtgc tagatttctc ctgattaaat attttatttt attttatttt tgcactaccg
      901 caagagcaat gctacaaaag tatgatagat tgcgacactc gttgaacttg tattgtgcag
      961 atatgggaag tgatcatctt gcttttgtgt gtgaatttgt ttatgctggt gattcttgtg
     1021 aaatgtgata ttgaagttga aggcggtaga agttagaccc aaacagtccc cacttcaatt
     1081 atcaaaatat agaatcttgc aaaaaatagt atatctccaa aaaatgtaaa gctagattta
     1141 ttattatatt atttatagtt gttcattttt tttcttactg acttgtaaag gtaggttttt
     1201 ccaggtttgt tacataccga atcactactc ttgtaattag
//
LOCUS       XM_071829714            2253 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alkaline/neutral invertase
            E, chloroplastic-like (LOC139839603), mRNA.
ACCESSION   XM_071829714
VERSION     XM_071829714.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2253
                     /gene="LOC139839603"
                     /note="alkaline/neutral invertase E, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 80 Proteins"
                     /db_xref="GeneID:139839603"
     CDS             240..2075
                     /gene="LOC139839603"
                     /codon_start=1
                     /product="alkaline/neutral invertase E,
                     chloroplastic-like"
                     /protein_id="XP_071685815.1"
                     /db_xref="GeneID:139839603"
                     /translation="MGSSEVMLQVLCGATPFIKSDAKYSRESFIKCKKRNDSVAIRVF
                     KRSSIFTSEKFKNRQFGNSRCKCQNAESVSESTTDNENGSLFVGNSKQFNGFQDTVHT
                     PNLVDSKEVFKIKKETEISVDKIEDEAWDLLRDSIVNYCGSPIGTIAANDPTSSSVLN
                     YDQVFIRDFIPSGIAFLLKGEYEIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKV
                     RTIPLEGDESATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKSSGDMSLQERID
                     VQTGIKMILKLCLADGFDMFPTLLVADGPCMIDRRMGIHGHPLEIQALFYSALMCARE
                     MLAPEDGSADLVRALNNRLIALSFHIREYYWIDLKKLNEIYRYKTEEYSYDAVNKFNI
                     YPDQICPWLVEWMPNRGGYLIGNLQPAHMDFRFFSLGNFWSVVSSLVTTEQSHAILDL
                     VEAKWTDLVADMPFKICYPALEGQEWQIITGSDPKNTPWSYHNGGSWPTLLWQLTVAC
                     IKMGRPEIAERAVKIAEGRLAQDKWPEYYDTKRGRFIGKQSRLFQTWTIAGYLVSKLL
                     LADPTKAKILMTDEDSELLNAFSSMITSSPRKKRGPKGSQKTYIV"
     misc_feature    240..2072
                     /gene="LOC139839603"
                     /note="Alkaline and neutral invertase; Region:
                     Glyco_hydro_100; cl17340"
                     /db_xref="CDD:450179"
     polyA_site      2253
                     /gene="LOC139839603"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttttaattt ttattataca aaaaaaaaaa aaaaaaaaaa aaaaataccc gtatgaatta
       61 ctacatacag acggccattg ctcaactgag tatcatcaaa atataaccgt tcatcgattc
      121 aacttcaatt actgtatcta acggtctgca ataagaagag gaggaccaga gtgattgaat
      181 tcaatactgt agtttggatt tcgctacaaa aatagagatt ttatataata attgttacta
      241 tgggttcatc tgaagtaatg ctacaagtgt tatgtggggc aacacctttt attaagtccg
      301 acgcaaaata ctctcgtgaa tcttttataa aatgcaaaaa gagaaacgac tcagtagcaa
      361 ttcgggtttt caagcgttca agcatcttca caagtgaaaa attcaaaaac cgacagttcg
      421 ggaattcgag atgtaaatgt cagaatgctg aaagtgttag tgaatctact actgataatg
      481 aaaatggaag tttatttgtg ggtaattcaa aacagtttaa tggatttcaa gatacagttc
      541 atacaccaaa tctcgtggat tcaaaggaag tttttaagat taagaaggaa acggagatta
      601 gtgttgataa gattgaggat gaagcgtggg acctactgcg tgactccata gtgaattatt
      661 gtggtagtcc tattggaacg atagctgcaa atgaccccac gagctccagt gttcttaact
      721 atgatcaagt tttcattcgt gacttcatac cttcgggtat agctttctta ttaaaagggg
      781 agtatgaaat cgtccgcaat ttcattcttc acacacttca attgcagagc tgggagaaaa
      841 caatggattg tcatagtcct ggtcaagggt tgatgccggc cagtttcaag gttcgtacaa
      901 tacccctcga gggtgatgaa agtgcaacag aagaagtatt agatcccgac tttggagagg
      961 ctgcaatcgg ccgtgttgcc cctgtagatt ctggcttatg gtggattata ttgttgcgtg
     1021 cgtatggaaa gagttcagga gatatgtcat tgcaggagag aatcgatgtt caaactggaa
     1081 tcaagatgat tttaaaatta tgtcttgctg atggtttcga tatgtttcct acgttactgg
     1141 tagcagatgg tccttgcatg atcgaccgac gtatgggcat tcatggccac cctctcgaaa
     1201 tccaggcact attttattca gcattaatgt gtgcgcgtga gatgcttgca ccagaagacg
     1261 gatcagcaga ccttgtaaga gccttaaaca accgtctaat tgcattatcg ttccacatca
     1321 gagagtatta ctggatagat ttaaagaaat taaatgaaat ttatcgttac aagacagaag
     1381 agtattctta tgatgctgta aacaaattca atatttaccc tgatcaaata tgtccatggt
     1441 tagttgaatg gatgccgaat agaggaggtt acctaatcgg gaacctgcaa cctgcccata
     1501 tggactttcg gtttttctct ttagggaact tttggtcagt agtgagcagt ttagttacga
     1561 ccgaacagtc acacgcgatt ttggatctcg ttgaagctaa atggacagat ttagttgctg
     1621 acatgccttt caagatttgt tatcctgctc ttgaaggtca agagtggcaa attataaccg
     1681 gaagtgatcc taagaacacg ccttggtcat accacaatgg aggttcatgg ccaacattgc
     1741 tttggcagct tacagtggca tgcatcaaga tgggcagacc agaaattgca gaaagagcgg
     1801 tgaagatagc agagggacga ttagctcaag acaagtggcc tgaatactac gacaccaaaa
     1861 gaggacggtt cattgggaag caatctcgtc tatttcaaac atggactatc gcaggttatc
     1921 ttgtgtcgaa actactcctt gcggacccta ccaaggccaa gattctgatg acggatgagg
     1981 attctgagct tctcaatgca ttttcttcaa tgatcacgtc tagcccacgt aagaaacgcg
     2041 gccctaaggg ttctcagaag acttacattg tttgagcttc ttttttgatc aagctcaatt
     2101 gtgtttcatg tatagataga ttatataaaa aggggcgaac cgttgagcca cttgtggttt
     2161 ttattcattt acgaagcaga acgaaaggac atgtaaatat gtgatttgtt cttgtatttc
     2221 ttgatagtaa taaaatcacc ccattcttag aca
//
LOCUS       XR_011756989            2149 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X1, misc_RNA.
ACCESSION   XR_011756989
VERSION     XR_011756989.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2149
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2149
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X1"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgg gcaaacagtt tcgatcgatt gcgattgtga agcatatgtt
      361 cgattttacg gcataagcaa tcgttgtgag gtaatgcaat cttcaatatt taatcgattg
      421 atttttgaat tttaatagta atttgaagct cttattgttc ataagcaatc gttgttagga
      481 cgtgaggtaa tgcaatctta tttgttgtag tggacgaacg ataatgacgg taccttcgct
      541 gctatttgtg ttactatctg atttacaata tttaattcat tcttcaaagt catttatctg
      601 ttaacaatgt aaatgaatca ggtccagttc tctttgaggt gacctatcga ccaagatatg
      661 ttctttaatt aaaggtattg gacgtcgttt tacaaatatt gtgtgcaaca aatctatatg
      721 aacaaaaggt atagttaatt ttattctata ctattgatta ttcatattgc tttcaaatta
      781 attttaaggc tgttgatttt atctaattat aatattatga atagttacat acacatttat
      841 aaagttcctg caaatcatta ggctatcaca taacttttcg ttaaagcttg tgacgtttta
      901 atttttatat gaaataggaa atggtaaatc gggctggtca tttgattatc gaacaaaatt
      961 aggtatttta ctctcactac ctcaatttta gttactctac gaagttgtat agacggagat
     1021 agaagccttt gtgattcaac acattttgac tgtactagaa ggaccatatt ttgacccact
     1081 atccaacttg acctgtttgc tgtgagcact acagattatg gttaatacaa tatctgcttc
     1141 tttttagtag ttgcatagta ttgttaagta ataattgatt tgtcgttact gattatgagt
     1201 ttcacgatag gtcttcatga atcttttagg ttgcacttac taacttgatt catgtaatct
     1261 acaggtagga ttaaggatta gttgaagatt atgcctaatg aacttaaaga tgatgctcac
     1321 actacaaagt taacaaatgt caaagtgaaa aatcagcatt tcatgaaaaa tggaagatct
     1381 gctgctaacg cttgatatca ttgctgaagt tgatgtttac aagtgggacc ctgagaatta
     1441 cctgctatat gcaggccaat ctaaacttaa aactggtgac agacaatggt tctttttcag
     1501 ccctcgagat agaaagtacc cgaatggtag atcaagtcga gcaacaccga acgggtactg
     1561 gaaagcaacc ggtaaagaca aaatcatcaa acgtaatgat gtttgtaatc acgatcatca
     1621 agaatatcaa agcataatga gtattcaaaa cattcatgag cctgttccta acccttcatc
     1681 agattgcatg gcaagatgag ttaatatgtg gctactgttc ctttagcaaa atgacacaag
     1741 tgtttgcatt ctgcttcatt tgctttgaat gacatacaag ggaagccaat ggtcaattca
     1801 tgatgatgca gagtcattta gtttcaagat ttattaagat gtggagagtt atttagtttc
     1861 gagatttatt atgatgtagt gttttaatag catatgagaa cccgtaacat tatactcagg
     1921 agttgatatt tgccaattat attatttaac tcaaattgat tttgcatgtt tgtgtcagat
     1981 tttctcctta atacttaaca agtatgtttc tttgtgaagc taaaactatt agttatattt
     2041 tgtcgtgatt caacaagttc gataaacact atgctaatct ttagtgtttt ttaagtgatg
     2101 tgtagcgcac aggctcataa aatctttgta tgatctagag gctcatgtt
//
LOCUS       XR_011756990            2322 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X2, misc_RNA.
ACCESSION   XR_011756990
VERSION     XR_011756990.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2322
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2322
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X2"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgg gcaaacagtt tcgatcgatt gcgattgtga agcatatgtt
      361 cgattttacg gcataagcaa tcgttgtgag gtaatgcaat cttcaatatt taatcgattg
      421 atttttgaat tttaatagta atttgaagct cttattgttc ataagcaatc gttgttagga
      481 cgtgaggtaa tgcaatctta tttgttgtag tggacgaacg ataatgacgg taccttcgct
      541 gctatttgtg ttactatctg atttacaata tttaattcat tcttcaaagt catttatctg
      601 ttaacaatgt aaatgaatca ggtccagttc tctttgaggt gacctatcga ccaagatatg
      661 ttctttaatt aaaggtattg gacgtcgttt tacaaatatt gtgtgcaaca aatctatatg
      721 aacaaaaggt atagttaatt ttattctata ctattgatta ttcatattgc tttcaaatta
      781 attttaaggc tgttgatttt atctaattat aatattatga atagttacat acacatttat
      841 aaagttcctg caaatcatta ggctatcaca taacttttcg ttaaagcttg tgacgtttta
      901 atttttatat gaaataggaa atggtaaatc gggctggtca tttgattatc gaacaaaatt
      961 aggtatttta ctctcactac ctcaatttta gttactctac gaagttgtat agacggagat
     1021 agaagccttt gtgattcaac acattttgac tgtactagaa ggaccatatt ttgacccact
     1081 atccaacttg acctgtttgc tgtgagcact acagattatg gttaatacaa tatctgcttc
     1141 tttttagtag ttgcatagta ttgttaagta ataattgatt tgtcgttact gattatgagt
     1201 ttcacgatag gtcttcatga atcttttagg ttgcacttac taacttgatt catgtaatct
     1261 acaggtagga ttaaggatta gttgaagatt atgcctaatg aacttaaaga tgatgctcac
     1321 actacaaagt taacaaatgt caaagtgaaa aatcagcatt tcatgaaaaa tggaagatct
     1381 gctgctaacg cttgatatca ttgctgaagt tgatgtttac aagtgggacc ctgagaatta
     1441 cctgctatat gcaggccaat ctaaacttaa aactggtgac agacaatggt tctttttcag
     1501 ccctcgagat agaaagtacc cgaatggtag atcaagtcga gcaacaccga acgggtactg
     1561 gaaagcaacc ggtaaagaca aaatcatcaa acgtaatgat gtttgtaatc acgatcatca
     1621 agaatatcaa agcataatga gtattcaaaa cattcatgag cctgttccta acccttcatc
     1681 agattgcatg gcaagatgag ttaatatgtg gctactgttc ctttagcaaa atgacacaag
     1741 tgtttgcatt ctgcttcatt tgctttgaat gacatacaag ggaagccaat ggtcaattca
     1801 tgatgatgca gagtcattta gtttcaagat ttattaagat gtggagagtt atttagtttc
     1861 gagatttatt atgatgtagt gttttaatag catatgagaa cccgtaacat tatactcagg
     1921 agttgatatt tgccaattat attatttaac tcaaattgat tttgcatgtt tgtgtcagat
     1981 tttctcctta atacttaaca agagctaaaa cctttgcagg atctggaggc tcatgttatc
     2041 gtgttggcca ttgaacagtg tttaacggaa ggaagataag cacctttttc tttgtaatta
     2101 accatggtac ttacaatttt tattactgaa gaaaataaag ttggtttact ttagacactt
     2161 ggatccgttg ggtcaccatt caacataatt tacaaagatg agaacatgac catttgtgaa
     2221 gttgttgtct tgcaaaatgt ttgtaccgaa agaatgtaca caatttttat aatttaattt
     2281 tcttataacc agtcgttttt ttattttcaa atacgtttac at
//
LOCUS       XR_011756991            2057 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X3, misc_RNA.
ACCESSION   XR_011756991
VERSION     XR_011756991.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2057
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2057
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X3"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgg gcaaacagtt tcgatcgatt gcgattgtga agcatatgtt
      361 cgattttacg gcataagcaa tcgttgtgag gtaatgcaat cttcaatatt taatcgattg
      421 atttttgaat tttaatagta atttgaagct cttattgttc ataagcaatc gttgttagga
      481 cgtgaggtaa tgcaatctta tttgttgtag tggacgaacg ataatgacgg tccagttctc
      541 tttgaggtga cctatcgacc aagatatgtt ctttaattaa aggtattgga cgtcgtttta
      601 caaatattgt gtgcaacaaa tctatatgaa caaaaggtat agttaatttt attctatact
      661 attgattatt catattgctt tcaaattaat tttaaggctg ttgattttat ctaattataa
      721 tattatgaat agttacatac acatttataa agttcctgca aatcattagg ctatcacata
      781 acttttcgtt aaagcttgtg acgttttaat ttttatatga aataggaaat ggtaaatcgg
      841 gctggtcatt tgattatcga acaaaattag gtattttact ctcactacct caattttagt
      901 tactctacga agttgtatag acggagatag aagcctttgt gattcaacac attttgactg
      961 tactagaagg accatatttt gacccactat ccaacttgac ctgtttgctg tgagcactac
     1021 agattatggt taatacaata tctgcttctt tttagtagtt gcatagtatt gttaagtaat
     1081 aattgatttg tcgttactga ttatgagttt cacgataggt cttcatgaat cttttaggtt
     1141 gcacttacta acttgattca tgtaatctac aggtaggatt aaggattagt tgaagattat
     1201 gcctaatgaa cttaaagatg atgctcacac tacaaagtta acaaatgtca aagtgaaaaa
     1261 tcagcatttc atgaaaaatg gaagatctgc tgctaacgct tgatatcatt gctgaagttg
     1321 atgtttacaa gtgggaccct gagaattacc tgctatatgc aggccaatct aaacttaaaa
     1381 ctggtgacag acaatggttc tttttcagcc ctcgagatag aaagtacccg aatggtagat
     1441 caagtcgagc aacaccgaac gggtactgga aagcaaccgg taaagacaaa atcatcaaac
     1501 gtaatgatgt ttgtaatcac gatcatcaag aatatcaaag cataatgagt attcaaaaca
     1561 ttcatgagcc tgttcctaac ccttcatcag attgcatggc aagatgagtt aatatgtggc
     1621 tactgttcct ttagcaaaat gacacaagtg tttgcattct gcttcatttg ctttgaatga
     1681 catacaaggg aagccaatgg tcaattcatg atgatgcaga gtcatttagt ttcaagattt
     1741 attaagatgt ggagagttat ttagtttcga gatttattat gatgtagtgt tttaatagca
     1801 tatgagaacc cgtaacatta tactcaggag ttgatatttg ccaattatat tatttaactc
     1861 aaattgattt tgcatgtttg tgtcagattt tctccttaat acttaacaag tatgtttctt
     1921 tgtgaagcta aaactattag ttatattttg tcgtgattca acaagttcga taaacactat
     1981 gctaatcttt agtgtttttt aagtgatgtg tagcgcacag gctcataaaa tctttgtatg
     2041 atctagaggc tcatgtt
//
LOCUS       XR_011756992            2091 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X4, misc_RNA.
ACCESSION   XR_011756992
VERSION     XR_011756992.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2091
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2091
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X4"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 caataacaca tacagagctc ttttcatcca ttctctctca cctcaaattt atctctcctc
       61 tcaaaataaa aataaaaacg accgacacca tgccatctct tccgccattt ttctgctccg
      121 acgtcgtcaa actgtaacag aaaaggtgta gtattaatcc attcattttt acaatcatat
      181 cggtaccgat taatcttaat accaccgctg ctcgatgaat cgcttcggtc cgatgaacag
      241 aagttcgcta gaaagtctaa gcccgacaaa gttcagtctt ttgatactac accggtcacc
      301 atccacaatt catcttattc cgggcaaaca gtttcgatcg attgcgattg tgaagcatat
      361 gttcgatttt acggcataag caatcgttgt gaggtaatgc aatcttcaat atttaatcga
      421 ttgatttttg aattttaata gtaatttgaa gctcttattg ttcataagca atcgttgtta
      481 ggacgtgagg taatgcaatc ttatttgttg tagtggacga acgataatga cggtaccttc
      541 gctgctattt gtgttactat ctgatttaca atatttaatt cattcttcaa agtcatttat
      601 ctgttaacaa tgtaaatgaa tcaggtccag ttctctttga ggtgacctat cgaccaagat
      661 atgttcttta attaaaggta ttggacgtcg ttttacaaat attgtgtgca acaaatctat
      721 atgaacaaaa ggtatagtta attttattct atactattga ttattcatat tgctttcaaa
      781 ttaattttaa ggctgttgat tttatctaat tataatatta tgaatagtta catacacatt
      841 tataaagttc ctgcaaatca ttaggctatc acataacttt tcgttaaagc ttgtgacgtt
      901 ttaattttta tatgaaatag gaaatggtaa atcgggctgg tcatttgatt atcgaacaaa
      961 attaggtatt ttactctcac tacctcaatt ttagttactc tacgaagttg tatagacgga
     1021 gatagaagcc tttgtgattc aacacatttt gactgtacta gaaggaccat attttgaccc
     1081 actatccaac ttgacctgtt tgctgtgagc actacagatt atggttaata caatatctgc
     1141 ttctttttag tagttgcata gtattgttaa gtaataattg atttgtcgtt actgattatg
     1201 agtttcacga taggtcttca tgaatctttt aggttgcact tactaacttg attcatgtaa
     1261 tctacaggta ggattaagga ttagttgaag attatgccta atgaacttaa agatgatgct
     1321 cacactacaa agttaacaaa tgtcaaagtg aaaaatcagc atttcatgaa aaatggaaga
     1381 tctgctgcta acgcttgata tcattgctga agttgatgtt tacaagtggg accctgagaa
     1441 ttacctgcta tatgcaggcc aatctaaact taaaactggt gacagacaat ggttcttttt
     1501 cagccctcga gatagaaagt acccgaatgg tagatcaagt cgagcaacac cgaacgggta
     1561 ctggaaagca accggtaaag acaaaatcat caaacgtaat gatgtttgta atcacgatca
     1621 tcaagaatat caaagcataa tgagtattca aaacattcat gagcctgttc ctaacccttc
     1681 atcagattgc atggcaagat gagttaatat gtggctactg ttcctttagc aaaatgacac
     1741 aagtgtttgc attctgcttc atttgctttg gagctaaaac ctttgcagga tctggaggct
     1801 catgttatcg tgttggccat tgaacagtgt ttaacggaag gaagataagc acctttttct
     1861 ttgtaattaa ccatggtact tacaattttt attactgaag aaaataaagt tggtttactt
     1921 tagacacttg gatccgttgg gtcaccattc aacataattt acaaagatga gaacatgacc
     1981 atttgtgaag ttgttgtctt gcaaaatgtt tgtaccgaaa gaatgtacac aatttttata
     2041 atttaatttt cttataacca gtcgtttttt tattttcaaa tacgtttaca t
//
LOCUS       XR_011756993            1960 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X5, misc_RNA.
ACCESSION   XR_011756993
VERSION     XR_011756993.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1960
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1960
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X5"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgg gcaaacagtt tcgatcgatt gcgattgtga agcatatgtt
      361 cgattttacg gcataagcaa tcgttgtgag gtaatgcaat cttcaatatt taatcgattg
      421 atttttgaat tttaatagta atttgaagct cttattgttc ataagcaatc gttgttagga
      481 cgtgaggtaa tgcaatctta tttgttgtag tggacgaacg ataatgacgg taccttcgct
      541 gctatttgtg ttactatctg atttacaata tttaattcat tcttcaaagt catttatctg
      601 ttaacaatgt aaatgaatca ggtccagttc tctttgaggt gacctatcga ccaagatatg
      661 ttctttaatt aaaggtattg gacgtcgttt tacaaatatt gtgtgcaaca aatctatatg
      721 aacaaaagga aatggtaaat cgggctggtc atttgattat cgaacaaaat taggtatttt
      781 actctcacta cctcaatttt agttactcta cgaagttgta tagacggaga tagaagcctt
      841 tgtgattcaa cacattttga ctgtactaga aggaccatat tttgacccac tatccaactt
      901 gacctgtttg ctgtgagcac tacagattat ggttaataca atatctgctt ctttttagta
      961 gttgcatagt attgttaagt aataattgat ttgtcgttac tgattatgag tttcacgata
     1021 ggtcttcatg aatcttttag gttgcactta ctaacttgat tcatgtaatc tacaggtagg
     1081 attaaggatt agttgaagat tatgcctaat gaacttaaag atgatgctca cactacaaag
     1141 ttaacaaatg tcaaagtgaa aaatcagcat ttcatgaaaa atggaagatc tgctgctaac
     1201 gcttgatatc attgctgaag ttgatgttta caagtgggac cctgagaatt acctgctata
     1261 tgcaggccaa tctaaactta aaactggtga cagacaatgg ttctttttca gccctcgaga
     1321 tagaaagtac ccgaatggta gatcaagtcg agcaacaccg aacgggtact ggaaagcaac
     1381 cggtaaagac aaaatcatca aacgtaatga tgtttgtaat cacgatcatc aagaatatca
     1441 aagcataatg agtattcaaa acattcatga gcctgttcct aacccttcat cagattgcat
     1501 ggcaagatga gttaatatgt ggctactgtt cctttagcaa aatgacacaa gtgtttgcat
     1561 tctgcttcat ttgctttgaa tgacatacaa gggaagccaa tggtcaattc atgatgatgc
     1621 agagtcattt agtttcaaga tttattaaga tgtggagagt tatttagttt cgagatttat
     1681 tatgatgtag tgttttaata gcatatgaga acccgtaaca ttatactcag gagttgatat
     1741 ttgccaatta tattatttaa ctcaaattga ttttgcatgt ttgtgtcaga ttttctcctt
     1801 aatacttaac aagtatgttt ctttgtgaag ctaaaactat tagttatatt ttgtcgtgat
     1861 tcaacaagtt cgataaacac tatgctaatc tttagtgttt tttaagtgat gtgtagcgca
     1921 caggctcata aaatctttgt atgatctaga ggctcatgtt
//
LOCUS       XR_011756994            2038 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X6, misc_RNA.
ACCESSION   XR_011756994
VERSION     XR_011756994.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2038
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2038
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X6"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ttttatgaaa ctctaattat tcaaacgaat acccttttgt tacaacccta atttcactct
       61 taatcggatt ccgttaacca tccaacattc atcggtttaa cgtttttgat ttttggagtt
      121 catcgatcta caatcaaaat aatcaataca aatatatgcc gtatgttatt ttatcacaga
      181 tgatttacgg tgccctaatc ccacaaatgg caaacagttt cgatcgattg cgattgtgaa
      241 gcatatgttc gattttacgg cataagcaat cgttgtgagg taatgcaatc ttcaatattt
      301 aatcgattga tttttgaatt ttaatagtaa tttgaagctc ttattgttca taagcaatcg
      361 ttgttaggac gtgaggtaat gcaatcttat ttgttgtagt ggacgaacga taatgacggt
      421 accttcgctg ctatttgtgt tactatctga tttacaatat ttaattcatt cttcaaagtc
      481 atttatctgt taacaatgta aatgaatcag gtccagttct ctttgaggtg acctatcgac
      541 caagatatgt tctttaatta aaggtattgg acgtcgtttt acaaatattg tgtgcaacaa
      601 atctatatga acaaaaggta tagttaattt tattctatac tattgattat tcatattgct
      661 ttcaaattaa ttttaaggct gttgatttta tctaattata atattatgaa tagttacata
      721 cacatttata aagttcctgc aaatcattag gctatcacat aacttttcgt taaagcttgt
      781 gacgttttaa tttttatatg aaataggaaa tggtaaatcg ggctggtcat ttgattatcg
      841 aacaaaatta ggtattttac tctcactacc tcaattttag ttactctacg aagttgtata
      901 gacggagata gaagcctttg tgattcaaca cattttgact gtactagaag gaccatattt
      961 tgacccacta tccaacttga cctgtttgct gtgagcacta cagattatgg ttaatacaat
     1021 atctgcttct ttttagtagt tgcatagtat tgttaagtaa taattgattt gtcgttactg
     1081 attatgagtt tcacgatagg tcttcatgaa tcttttaggt tgcacttact aacttgattc
     1141 atgtaatcta caggtaggat taaggattag ttgaagatta tgcctaatga acttaaagat
     1201 gatgctcaca ctacaaagtt aacaaatgtc aaagtgaaaa atcagcattt catgaaaaat
     1261 ggaagatctg ctgctaacgc ttgatatcat tgctgaagtt gatgtttaca agtgggaccc
     1321 tgagaattac ctgctatatg caggccaatc taaacttaaa actggtgaca gacaatggtt
     1381 ctttttcagc cctcgagata gaaagtaccc gaatggtaga tcaagtcgag caacaccgaa
     1441 cgggtactgg aaagcaaccg gtaaagacaa aatcatcaaa cgtaatgatg tttgtaatca
     1501 cgatcatcaa gaatatcaaa gcataatgag tattcaaaac attcatgagc ctgttcctaa
     1561 cccttcatca gattgcatgg caagatgagt taatatgtgg ctactgttcc tttagcaaaa
     1621 tgacacaagt gtttgcattc tgcttcattt gctttgaatg acatacaagg gaagccaatg
     1681 gtcaattcat gatgatgcag agtcatttag tttcaagatt tattaagatg tggagagtta
     1741 tttagtttcg agatttatta tgatgtagtg ttttaatagc atatgagaac ccgtaacatt
     1801 atactcagga gttgatattt gccaattata ttatttaact caaattgatt ttgcatgttt
     1861 gtgtcagatt ttctccttaa tacttaacaa gtatgtttct ttgtgaagct aaaactatta
     1921 gttatatttt gtcgtgattc aacaagttcg ataaacacta tgctaatctt tagtgttttt
     1981 taagtgatgt gtagcgcaca ggctcataaa atctttgtat gatctagagg ctcatgtt
//
LOCUS       XR_011756995            2006 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X7, misc_RNA.
ACCESSION   XR_011756995
VERSION     XR_011756995.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2006
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2006
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X7"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat ttaatcgatt
      421 gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat cgttgttagg
      481 acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg gtaccttcgc
      541 tgctatttgt gttactatct gatttacaat atttaattca ttcttcaaag tcatttatct
      601 gttaacaatg taaatgaatc aggtccagtt ctctttgagg tgacctatcg accaagatat
      661 gttctttaat taaaggtatt ggacgtcgtt ttacaaatat tgtgtgcaac aaatctatat
      721 gaacaaaagg tatagttaat tttattctat actattgatt attcatattg ctttcaaatt
      781 aattttaagg ctgttgattt tatctaatta taatattatg aatagttaca tacacattta
      841 taaagttcct gcaaatcatt aggctatcac ataacttttc gttaaagctt gtgacgtttt
      901 aatttttata tgaaatagga aatggtaaat cgggctggtc atttgattat cgaacaaaat
      961 taggtatttt actctcacta cctcaatttt agttactcta cgaagttgta tagacggaga
     1021 tagaagcctt tgtgattcaa cacattttga ctgtactaga aggaccatat tttgacccac
     1081 tatccaactt gacctgtttg ctgtgagcac tacagattat ggtaggatta aggattagtt
     1141 gaagattatg cctaatgaac ttaaagatga tgctcacact acaaagttaa caaatgtcaa
     1201 agtgaaaaat cagcatttca tgaaaaatgg aagatctgct gctaacgctt gatatcattg
     1261 ctgaagttga tgtttacaag tgggaccctg agaattacct gctatatgca ggccaatcta
     1321 aacttaaaac tggtgacaga caatggttct ttttcagccc tcgagataga aagtacccga
     1381 atggtagatc aagtcgagca acaccgaacg ggtactggaa agcaaccggt aaagacaaaa
     1441 tcatcaaacg taatgatgtt tgtaatcacg atcatcaaga atatcaaagc ataatgagta
     1501 ttcaaaacat tcatgagcct gttcctaacc cttcatcaga ttgcatggca agatgagtta
     1561 atatgtggct actgttcctt tagcaaaatg acacaagtgt ttgcattctg cttcatttgc
     1621 tttgaatgac atacaaggga agccaatggt caattcatga tgatgcagag tcatttagtt
     1681 tcaagattta ttaagatgtg gagagttatt tagtttcgag atttattatg atgtagtgtt
     1741 ttaatagcat atgagaaccc gtaacattat actcaggagt tgatatttgc caattatatt
     1801 atttaactca aattgatttt gcatgtttgt gtcagatttt ctccttaata cttaacaagt
     1861 atgtttcttt gtgaagctaa aactattagt tatattttgt cgtgattcaa caagttcgat
     1921 aaacactatg ctaatcttta gtgtttttta agtgatgtgt agcgcacagg ctcataaaat
     1981 ctttgtatga tctagaggct catgtt
//
LOCUS       XR_011756996            2140 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X8, misc_RNA.
ACCESSION   XR_011756996
VERSION     XR_011756996.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2140
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2140
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X8"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgt ttcgatcgat tgcgattgtg aagcatatgt tcgattttac
      361 ggcataagca atcgttgtga ggtaatgcaa tcttcaatat ttaatcgatt gatttttgaa
      421 ttttaatagt aatttgaagc tcttattgtt cataagcaat cgttgttagg acgtgaggta
      481 atgcaatctt atttgttgta gtggacgaac gataatgacg gtaccttcgc tgctatttgt
      541 gttactatct gatttacaat atttaattca ttcttcaaag tcatttatct gttaacaatg
      601 taaatgaatc aggtccagtt ctctttgagg tgacctatcg accaagatat gttctttaat
      661 taaaggtatt ggacgtcgtt ttacaaatat tgtgtgcaac aaatctatat gaacaaaagg
      721 tatagttaat tttattctat actattgatt attcatattg ctttcaaatt aattttaagg
      781 ctgttgattt tatctaatta taatattatg aatagttaca tacacattta taaagttcct
      841 gcaaatcatt aggctatcac ataacttttc gttaaagctt gtgacgtttt aatttttata
      901 tgaaatagga aatggtaaat cgggctggtc atttgattat cgaacaaaat taggtatttt
      961 actctcacta cctcaatttt agttactcta cgaagttgta tagacggaga tagaagcctt
     1021 tgtgattcaa cacattttga ctgtactaga aggaccatat tttgacccac tatccaactt
     1081 gacctgtttg ctgtgagcac tacagattat ggttaataca atatctgctt ctttttagta
     1141 gttgcatagt attgttaagt aataattgat ttgtcgttac tgattatgag tttcacgata
     1201 ggtcttcatg aatcttttag gttgcactta ctaacttgat tcatgtaatc tacaggtagg
     1261 attaaggatt agttgaagat tatgcctaat gaacttaaag atgatgctca cactacaaag
     1321 ttaacaaatg tcaaagtgaa aaatcagcat ttcatgaaaa atggaagatc tgctgctaac
     1381 gcttgatatc attgctgaag ttgatgttta caagtgggac cctgagaatt acctgctata
     1441 tgcaggccaa tctaaactta aaactggtga cagacaatgg ttctttttca gccctcgaga
     1501 tagaaagtac ccgaatggta gatcaagtcg agcaacaccg aacgggtact ggaaagcaac
     1561 cggtaaagac aaaatcatca aacgtaatga tgtttgtaat cacgatcatc aagaatatca
     1621 aagcataatg agtattcaaa acattcatga gcctgttcct aacccttcat cagattgcat
     1681 ggcaagatga gttaatatgt ggctactgtt cctttagcaa aatgacacaa gtgtttgcat
     1741 tctgcttcat ttgctttgaa tgacatacaa gggaagccaa tggtcaattc atgatgatgc
     1801 agagtcattt agtttcaaga tttattaaga tgtggagagt tatttagttt cgagatttat
     1861 tatgatgtag tgttttaata gcatatgaga acccgtaaca ttatactcag gagttgatat
     1921 ttgccaatta tattatttaa ctcaaattga ttttgcatgt ttgtgtcaga ttttctcctt
     1981 aatacttaac aagtatgttt ctttgtgaag ctaaaactat tagttatatt ttgtcgtgat
     2041 tcaacaagtt cgataaacac tatgctaatc tttagtgttt tttaagtgat gtgtagcgca
     2101 caggctcata aaatctttgt atgatctaga ggctcatgtt
//
LOCUS       XR_011756997            1848 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X9, misc_RNA.
ACCESSION   XR_011756997
VERSION     XR_011756997.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1848
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1848
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X9"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat ttaatcgatt
      421 gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat cgttgttagg
      481 acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg gtaccttcgc
      541 tgctatttgt gttactatct gatttacaat atttaattca ttcttcaaag tcatttatct
      601 gttaacaatg taaatgaatc aggtccagtt ctctttgagg tgacctatcg accaagatat
      661 gttctttaat taaaggtatt ggacgtcgtt ttacaaatat tgtgtgcaac aaatctatat
      721 gaacaaaagg tatagttaat tttattctat actattgatt attcatattg ctttcaaatt
      781 aattttaagg ctgttgattt tatctaatta taatattatg aatagttaca tacacattta
      841 taaagttcct gcaaatcatt aggctatcac ataacttttc gttaaagctt gtgacgtttt
      901 aatttttata tgaaatagga aatggtaaat cgggctggtc atttgattat cgaacaaaat
      961 taggtaggat taaggattag ttgaagatta tgcctaatga acttaaagat gatgctcaca
     1021 ctacaaagtt aacaaatgtc aaagtgaaaa atcagcattt catgaaaaat ggaagatctg
     1081 ctgctaacgc ttgatatcat tgctgaagtt gatgtttaca agtgggaccc tgagaattac
     1141 ctgctatatg caggccaatc taaacttaaa actggtgaca gacaatggtt ctttttcagc
     1201 cctcgagata gaaagtaccc gaatggtaga tcaagtcgag caacaccgaa cgggtactgg
     1261 aaagcaaccg gtaaagacaa aatcatcaaa cgtaatgatg tttgtaatca cgatcatcaa
     1321 gaatatcaaa gcataatgag tattcaaaac attcatgagc ctgttcctaa cccttcatca
     1381 gattgcatgg caagatgagt taatatgtgg ctactgttcc tttagcaaaa tgacacaagt
     1441 gtttgcattc tgcttcattt gctttgaatg acatacaagg gaagccaatg gtcaattcat
     1501 gatgatgcag agtcatttag tttcaagatt tattaagatg tggagagtta tttagtttcg
     1561 agatttatta tgatgtagtg ttttaatagc atatgagaac ccgtaacatt atactcagga
     1621 gttgatattt gccaattata ttatttaact caaattgatt ttgcatgttt gtgtcagatt
     1681 ttctccttaa tacttaacaa gtatgtttct ttgtgaagct aaaactatta gttatatttt
     1741 gtcgtgattc aacaagttcg ataaacacta tgctaatctt tagtgttttt taagtgatgt
     1801 gtagcgcaca ggctcataaa atctttgtat gatctagagg ctcatgtt
//
LOCUS       XR_011756998            1868 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X10, misc_RNA.
ACCESSION   XR_011756998
VERSION     XR_011756998.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1868
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1868
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X10"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgg gcaaacagtt tcgatcgatt gcgattgtga agcatatgtt
      361 cgattttacg gcataagcaa tcgttgtgag gtaatgcaat cttcaatatt taatcgattg
      421 atttttgaat tttaatagta atttgaagct cttattgttc ataagcaatc gttgttagga
      481 cgtgaggtaa tgcaatctta tttgttgtag tggacgaacg ataatgacgg tccagttctc
      541 tttgaggtga cctatcgacc aagatatgtt ctttaattaa aggtattgga cgtcgtttta
      601 caaatattgt gtgcaacaaa tctatatgaa caaaaggaaa tggtaaatcg ggctggtcat
      661 ttgattatcg aacaaaatta ggtattttac tctcactacc tcaattttag ttactctacg
      721 aagttgtata gacggagata gaagcctttg tgattcaaca cattttgact gtactagaag
      781 gaccatattt tgacccacta tccaacttga cctgtttgct gtgagcacta cagattatgg
      841 ttaatacaat atctgcttct ttttagtagt tgcatagtat tgttaagtaa taattgattt
      901 gtcgttactg attatgagtt tcacgatagg tcttcatgaa tcttttaggt tgcacttact
      961 aacttgattc atgtaatcta caggtaggat taaggattag ttgaagatta tgcctaatga
     1021 acttaaagat gatgctcaca ctacaaagtt aacaaatgtc aaagtgaaaa atcagcattt
     1081 catgaaaaat ggaagatctg ctgctaacgc ttgatatcat tgctgaagtt gatgtttaca
     1141 agtgggaccc tgagaattac ctgctatatg caggccaatc taaacttaaa actggtgaca
     1201 gacaatggtt ctttttcagc cctcgagata gaaagtaccc gaatggtaga tcaagtcgag
     1261 caacaccgaa cgggtactgg aaagcaaccg gtaaagacaa aatcatcaaa cgtaatgatg
     1321 tttgtaatca cgatcatcaa gaatatcaaa gcataatgag tattcaaaac attcatgagc
     1381 ctgttcctaa cccttcatca gattgcatgg caagatgagt taatatgtgg ctactgttcc
     1441 tttagcaaaa tgacacaagt gtttgcattc tgcttcattt gctttgaatg acatacaagg
     1501 gaagccaatg gtcaattcat gatgatgcag agtcatttag tttcaagatt tattaagatg
     1561 tggagagtta tttagtttcg agatttatta tgatgtagtg ttttaatagc atatgagaac
     1621 ccgtaacatt atactcagga gttgatattt gccaattata ttatttaact caaattgatt
     1681 ttgcatgttt gtgtcagatt ttctccttaa tacttaacaa gtatgtttct ttgtgaagct
     1741 aaaactatta gttatatttt gtcgtgattc aacaagttcg ataaacacta tgctaatctt
     1801 tagtgttttt taagtgatgt gtagcgcaca ggctcataaa atctttgtat gatctagagg
     1861 ctcatgtt
//
LOCUS       XM_071829715            1980 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X11, mRNA.
ACCESSION   XM_071829715
VERSION     XM_071829715.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1980
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     CDS             1383..1712
                     /gene="LOC139839604"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685816.1"
                     /db_xref="GeneID:139839604"
                     /translation="MEDLLLTLDIIAEVDVYKWDPENYLANLNLKLVTDNGSFSALEI
                     ESTRMVDQVEQHRTGTGKQPIAWQDELICGYCSFSKMTQVFAFCFICFGAKTFAGSGG
                     SCYRVGH"
ORIGIN      
        1 aacggttgaa caataacaca tacagagctc ttttcatcca ttctctctca cctcaaattt
       61 atctctcctc tcaaaataaa aataaaaacg accgacacca tgccatctct tccgccattt
      121 ttctgctccg acgtcgtcaa actgtaacag aaaaggtgta gtattaatcc attcattttt
      181 acaatcatat cggtaccgat taatcttaat accaccgctg ctcgatgaat cgcttcggtc
      241 cgatgaacag aagttcgcta gaaagtctaa gcccgacaaa gttcagtctt ttgatactac
      301 accggtcacc atccacaatt catcttattc cgggcaaaca gtttcgatcg attgcgattg
      361 tgaagcatat gttcgatttt acggcataag caatcgttgt gaggtaatgc aatcttcaat
      421 atttaatcga ttgatttttg aattttaata gtaatttgaa gctcttattg ttcataagca
      481 atcgttgtta ggacgtgagg taatgcaatc ttatttgttg tagtggacga acgataatga
      541 cggtaccttc gctgctattt gtgttactat ctgatttaca atatttaatt cattcttcaa
      601 agtcatttat ctgttaacaa tgtaaatgaa tcaggtccag ttctctttga ggtgacctat
      661 cgaccaagat atgttcttta attaaaggta ttggacgtcg ttttacaaat attgtgtgca
      721 acaaatctat atgaacaaaa ggtatagtta attttattct atactattga ttattcatat
      781 tgctttcaaa ttaattttaa ggctgttgat tttatctaat tataatatta tgaatagtta
      841 catacacatt tataaagttc ctgcaaatca ttaggctatc acataacttt tcgttaaagc
      901 ttgtgacgtt ttaattttta tatgaaatag gaaatggtaa atcgggctgg tcatttgatt
      961 atcgaacaaa attaggtatt ttactctcac tacctcaatt ttagttactc tacgaagttg
     1021 tatagacgga gatagaagcc tttgtgattc aacacatttt gactgtacta gaaggaccat
     1081 attttgaccc actatccaac ttgacctgtt tgctgtgagc actacagatt atggttaata
     1141 caatatctgc ttctttttag tagttgcata gtattgttaa gtaataattg atttgtcgtt
     1201 actgattatg agtttcacga taggtcttca tgaatctttt aggttgcact tactaacttg
     1261 attcatgtaa tctacaggta ggattaagga ttagttgaag attatgccta atgaacttaa
     1321 agatgatgct cacactacaa agttaacaaa tgtcaaagtg aaaaatcagc atttcatgaa
     1381 aaatggaaga tctgctgcta acgcttgata tcattgctga agttgatgtt tacaagtggg
     1441 accctgagaa ttacctggcc aatctaaact taaaactggt gacagacaat ggttcttttt
     1501 cagccctcga gatagaaagt acccgaatgg tagatcaagt cgagcaacac cgaacgggta
     1561 ctggaaagca accgattgca tggcaagatg agttaatatg tggctactgt tcctttagca
     1621 aaatgacaca agtgtttgca ttctgcttca tttgctttgg agctaaaacc tttgcaggat
     1681 ctggaggctc atgttatcgt gttggccatt gaacagtgtt taacggaagg aagataagca
     1741 cctttttctt tgtaattaac catggtactt acaattttta ttactgaaga aaataaagtt
     1801 ggtttacttt agacacttgg atccgttggg tcaccattca acataattta caaagatgag
     1861 aacatgacca tttgtgaagt tgttgtcttg caaaatgttt gtaccgaaag aatgtacaca
     1921 atttttataa tttaattttc ttataaccag tcgttttttt attttcaaat acgtttacat
//
LOCUS       XR_011756999            1871 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X12, misc_RNA.
ACCESSION   XR_011756999
VERSION     XR_011756999.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1871
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1871
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X12"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ttttatgaaa ctctaattat tcaaacgaat acccttttgt tacaacccta atttcactct
       61 taatcggatt ccgttaacca tccaacattc atcggtttaa cgtttttgat ttttggagtt
      121 catcgatcta caatcaaaat aatcaataca aatatatgcc gtatgttatt ttatcacaga
      181 tgatttacgg tgccctaatc ccacaaatgg caaacagttt cgatcgattg cgattgtgaa
      241 gcatatgttc gattttacgg cataagcaat cgttgtgagc aatcgttgtt aggacgtgag
      301 gtaatgcaat cttatttgtt gtagtggacg aacgataatg acggtccagt tctctttgag
      361 gtgacctatc gaccaagata tgttctttaa ttaaaggtat tggacgtcgt tttacaaata
      421 ttgtgtgcaa caaatctata tgaacaaaag gtatagttaa ttttattcta tactattgat
      481 tattcatatt gctttcaaat taattttaag gctgttgatt ttatctaatt ataatattat
      541 gaatagttac atacacattt ataaagttcc tgcaaatcat taggctatca cataactttt
      601 cgttaaagct tgtgacgttt taatttttat atgaaatagg aaatggtaaa tcgggctggt
      661 catttgatta tcgaacaaaa ttaggtattt tactctcact acctcaattt tagttactct
      721 acgaagttgt atagacggag atagaagcct ttgtgattca acacattttg actgtactag
      781 aaggaccata ttttgaccca ctatccaact tgacctgttt gctgtgagca ctacagatta
      841 tggttaatac aatatctgct tctttttagt agttgcatag tattgttaag taataattga
      901 tttgtcgtta ctgattatga gtttcacgat aggtcttcat gaatctttta ggttgcactt
      961 actaacttga ttcatgtaat ctacaggtag gattaaggat tagttgaaga ttatgcctaa
     1021 tgaacttaaa gatgatgctc acactacaaa gttaacaaat gtcaaagtga aaaatcagca
     1081 tttcatgaaa aatggaagat ctgctgctaa cgcttgatat cattgctgaa gttgatgttt
     1141 acaagtggga ccctgagaat tacctgctat atgcaggcca atctaaactt aaaactggtg
     1201 acagacaatg gttctttttc agccctcgag atagaaagta cccgaatggt agatcaagtc
     1261 gagcaacacc gaacgggtac tggaaagcaa ccggtaaaga caaaatcatc aaacgtaatg
     1321 atgtttgtaa tcacgatcat caagaatatc aaagcataat gagtattcaa aacattcatg
     1381 agcctgttcc taacccttca tcagattgca tggcaagatg agttaatatg tggctactgt
     1441 tcctttagca aaatgacaca agtgtttgca ttctgcttca tttgctttga atgacataca
     1501 agggaagcca atggtcaatt catgatgatg cagagtcatt tagtttcaag atttattaag
     1561 atgtggagag ttatttagtt tcgagattta ttatgatgta gtgttttaat agcatatgag
     1621 aacccgtaac attatactca ggagttgata tttgccaatt atattattta actcaaattg
     1681 attttgcatg tttgtgtcag attttctcct taatacttaa caagtatgtt tctttgtgaa
     1741 gctaaaacta ttagttatat tttgtcgtga ttcaacaagt tcgataaaca ctatgctaat
     1801 ctttagtgtt ttttaagtga tgtgtagcgc acaggctcat aaaatctttg tatgatctag
     1861 aggctcatgt t
//
LOCUS       XR_011757000            1659 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X13, misc_RNA.
ACCESSION   XR_011757000
VERSION     XR_011757000.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1659
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1659
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X13"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat ttaatcgatt
      421 gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat cgttgttagg
      481 acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg gtaccttcgc
      541 tgctatttgt gttactatct gatttacaat atttaattca ttcttcaaag tcatttatct
      601 gttaacaatg taaatgaatc aggtccagtt ctctttgagg tgacctatcg accaagatat
      661 gttctttaat taaaggtatt ggacgtcgtt ttacaaatat tgtgtgcaac aaatctatat
      721 gaacaaaagg aaatggtaaa tcgggctggt catttgatta tcgaacaaaa ttaggtagga
      781 ttaaggatta gttgaagatt atgcctaatg aacttaaaga tgatgctcac actacaaagt
      841 taacaaatgt caaagtgaaa aatcagcatt tcatgaaaaa tggaagatct gctgctaacg
      901 cttgatatca ttgctgaagt tgatgtttac aagtgggacc ctgagaatta cctgctatat
      961 gcaggccaat ctaaacttaa aactggtgac agacaatggt tctttttcag ccctcgagat
     1021 agaaagtacc cgaatggtag atcaagtcga gcaacaccga acgggtactg gaaagcaacc
     1081 ggtaaagaca aaatcatcaa acgtaatgat gtttgtaatc acgatcatca agaatatcaa
     1141 agcataatga gtattcaaaa cattcatgag cctgttccta acccttcatc agattgcatg
     1201 gcaagatgag ttaatatgtg gctactgttc ctttagcaaa atgacacaag tgtttgcatt
     1261 ctgcttcatt tgctttgaat gacatacaag ggaagccaat ggtcaattca tgatgatgca
     1321 gagtcattta gtttcaagat ttattaagat gtggagagtt atttagtttc gagatttatt
     1381 atgatgtagt gttttaatag catatgagaa cccgtaacat tatactcagg agttgatatt
     1441 tgccaattat attatttaac tcaaattgat tttgcatgtt tgtgtcagat tttctcctta
     1501 atacttaaca agtatgtttc tttgtgaagc taaaactatt agttatattt tgtcgtgatt
     1561 caacaagttc gataaacact atgctaatct ttagtgtttt ttaagtgatg tgtagcgcac
     1621 aggctcataa aatctttgta tgatctagag gctcatgtt
//
LOCUS       XR_011757001            1950 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X14, misc_RNA.
ACCESSION   XR_011757001
VERSION     XR_011757001.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1950
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1950
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X14"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ttttatgaaa ctctaattat tcaaacgaat acccttttgt tacaacccta atttcactct
       61 taatcggatt ccgttaacca tccaacattc atcggtttaa cgtttttgat ttttggagtt
      121 catcgatcta caatcaaaat aatcaataca aatatatgcc gtatgttatt ttatcacaga
      181 tgatttacgg tgccctaatc ccacaaatgg caaacagttt cgatcgattg cgattgtgaa
      241 gcatatgttc gattttacgg cataagcaat cgttgtgagg acgtgaggta atgcaatctt
      301 atttgttgta gtggacgaac gataatgacg gtaccttcgc tgctatttgt gttactatct
      361 gatttacaat atttaattca ttcttcaaag tcatttatct gttaacaatg taaatgaatc
      421 aggtccagtt ctctttgagg tgacctatcg accaagatat gttctttaat taaaggtatt
      481 ggacgtcgtt ttacaaatat tgtgtgcaac aaatctatat gaacaaaagg tatagttaat
      541 tttattctat actattgatt attcatattg ctttcaaatt aattttaagg ctgttgattt
      601 tatctaatta taatattatg aatagttaca tacacattta taaagttcct gcaaatcatt
      661 aggctatcac ataacttttc gttaaagctt gtgacgtttt aatttttata tgaaatagga
      721 aatggtaaat cgggctggtc atttgattat cgaacaaaat taggtatttt actctcacta
      781 cctcaatttt agttactcta cgaagttgta tagacggaga tagaagcctt tgtgattcaa
      841 cacattttga ctgtactaga aggaccatat tttgacccac tatccaactt gacctgtttg
      901 ctgtgagcac tacagattat ggttaataca atatctgctt ctttttagta gttgcatagt
      961 attgttaagt aataattgat ttgtcgttac tgattatgag tttcacgata ggtcttcatg
     1021 aatcttttag gttgcactta ctaacttgat tcatgtaatc tacaggtagg attaaggatt
     1081 agttgaagat tatgcctaat gaacttaaag atgatgctca cactacaaag ttaacaaatg
     1141 tcaaagtgaa aaatcagcat ttcatgaaaa atggaagatc tgctgctaac gcttgatatc
     1201 attgctgaag ttgatgttta caagtgggac cctgagaatt acctgctata tgcaggccaa
     1261 tctaaactta aaactggtga cagacaatgg ttctttttca gccctcgaga tagaaagtac
     1321 ccgaatggta gatcaagtcg agcaacaccg aacgggtact ggaaagcaac cggtaaagac
     1381 aaaatcatca aacgtaatga tgtttgtaat cacgatcatc aagaatatca aagcataatg
     1441 agtattcaaa acattcatga gcctgttcct aacccttcat cagattgcat ggcaagatga
     1501 gttaatatgt ggctactgtt cctttagcaa aatgacacaa gtgtttgcat tctgcttcat
     1561 ttgctttgaa tgacatacaa gggaagccaa tggtcaattc atgatgatgc agagtcattt
     1621 agtttcaaga tttattaaga tgtggagagt tatttagttt cgagatttat tatgatgtag
     1681 tgttttaata gcatatgaga acccgtaaca ttatactcag gagttgatat ttgccaatta
     1741 tattatttaa ctcaaattga ttttgcatgt ttgtgtcaga ttttctcctt aatacttaac
     1801 aagtatgttt ctttgtgaag ctaaaactat tagttatatt ttgtcgtgat tcaacaagtt
     1861 cgataaacac tatgctaatc tttagtgttt tttaagtgat gtgtagcgca caggctcata
     1921 aaatctttgt atgatctaga ggctcatgtt
//
LOCUS       XR_011757002            2052 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X15, misc_RNA.
ACCESSION   XR_011757002
VERSION     XR_011757002.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2052
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2052
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X15"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgt ttcgatcgat tgcgattgtg aagcatatgt tcgattttac
      361 ggcataagca atcgttgtga ggacgtgagg taatgcaatc ttatttgttg tagtggacga
      421 acgataatga cggtaccttc gctgctattt gtgttactat ctgatttaca atatttaatt
      481 cattcttcaa agtcatttat ctgttaacaa tgtaaatgaa tcaggtccag ttctctttga
      541 ggtgacctat cgaccaagat atgttcttta attaaaggta ttggacgtcg ttttacaaat
      601 attgtgtgca acaaatctat atgaacaaaa ggtatagtta attttattct atactattga
      661 ttattcatat tgctttcaaa ttaattttaa ggctgttgat tttatctaat tataatatta
      721 tgaatagtta catacacatt tataaagttc ctgcaaatca ttaggctatc acataacttt
      781 tcgttaaagc ttgtgacgtt ttaattttta tatgaaatag gaaatggtaa atcgggctgg
      841 tcatttgatt atcgaacaaa attaggtatt ttactctcac tacctcaatt ttagttactc
      901 tacgaagttg tatagacgga gatagaagcc tttgtgattc aacacatttt gactgtacta
      961 gaaggaccat attttgaccc actatccaac ttgacctgtt tgctgtgagc actacagatt
     1021 atggttaata caatatctgc ttctttttag tagttgcata gtattgttaa gtaataattg
     1081 atttgtcgtt actgattatg agtttcacga taggtcttca tgaatctttt aggttgcact
     1141 tactaacttg attcatgtaa tctacaggta ggattaagga ttagttgaag attatgccta
     1201 atgaacttaa agatgatgct cacactacaa agttaacaaa tgtcaaagtg aaaaatcagc
     1261 atttcatgaa aaatggaaga tctgctgcta acgcttgata tcattgctga agttgatgtt
     1321 tacaagtggg accctgagaa ttacctgcta tatgcaggcc aatctaaact taaaactggt
     1381 gacagacaat ggttcttttt cagccctcga gatagaaagt acccgaatgg tagatcaagt
     1441 cgagcaacac cgaacgggta ctggaaagca accggtaaag acaaaatcat caaacgtaat
     1501 gatgtttgta atcacgatca tcaagaatat caaagcataa tgagtattca aaacattcat
     1561 gagcctgttc ctaacccttc atcagattgc atggcaagat gagttaatat gtggctactg
     1621 ttcctttagc aaaatgacac aagtgtttgc attctgcttc atttgctttg aatgacatac
     1681 aagggaagcc aatggtcaat tcatgatgat gcagagtcat ttagtttcaa gatttattaa
     1741 gatgtggaga gttatttagt ttcgagattt attatgatgt agtgttttaa tagcatatga
     1801 gaacccgtaa cattatactc aggagttgat atttgccaat tatattattt aactcaaatt
     1861 gattttgcat gtttgtgtca gattttctcc ttaatactta acaagtatgt ttctttgtga
     1921 agctaaaact attagttata ttttgtcgtg attcaacaag ttcgataaac actatgctaa
     1981 tctttagtgt tttttaagtg atgtgtagcg cacaggctca taaaatcttt gtatgatcta
     2041 gaggctcatg tt
//
LOCUS       XR_011757003            1605 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X16, misc_RNA.
ACCESSION   XR_011757003
VERSION     XR_011757003.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1605
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1605
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X16"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat ttaatcgatt
      421 gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat cgttgttagg
      481 acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg gtaccttcgc
      541 tgctatttgt gttactatct gatttacaat atttaattca ttcttcaaag tcatttatct
      601 gttaacaatg taaatgaatc aggtccagtt ctctttgagg tgacctatcg accaagatat
      661 gttctttaat taaaggaaat ggtaaatcgg gctggtcatt tgattatcga acaaaattag
      721 gtaggattaa ggattagttg aagattatgc ctaatgaact taaagatgat gctcacacta
      781 caaagttaac aaatgtcaaa gtgaaaaatc agcatttcat gaaaaatgga agatctgctg
      841 ctaacgcttg atatcattgc tgaagttgat gtttacaagt gggaccctga gaattacctg
      901 ctatatgcag gccaatctaa acttaaaact ggtgacagac aatggttctt tttcagccct
      961 cgagatagaa agtacccgaa tggtagatca agtcgagcaa caccgaacgg gtactggaaa
     1021 gcaaccggta aagacaaaat catcaaacgt aatgatgttt gtaatcacga tcatcaagaa
     1081 tatcaaagca taatgagtat tcaaaacatt catgagcctg ttcctaaccc ttcatcagat
     1141 tgcatggcaa gatgagttaa tatgtggcta ctgttccttt agcaaaatga cacaagtgtt
     1201 tgcattctgc ttcatttgct ttgaatgaca tacaagggaa gccaatggtc aattcatgat
     1261 gatgcagagt catttagttt caagatttat taagatgtgg agagttattt agtttcgaga
     1321 tttattatga tgtagtgttt taatagcata tgagaacccg taacattata ctcaggagtt
     1381 gatatttgcc aattatatta tttaactcaa attgattttg catgtttgtg tcagattttc
     1441 tccttaatac ttaacaagta tgtttctttg tgaagctaaa actattagtt atattttgtc
     1501 gtgattcaac aagttcgata aacactatgc taatctttag tgttttttaa gtgatgtgta
     1561 gcgcacaggc tcataaaatc tttgtatgat ctagaggctc atgtt
//
LOCUS       XR_011757004            1522 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X17, misc_RNA.
ACCESSION   XR_011757004
VERSION     XR_011757004.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1522
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1522
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X17"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat ttaatcgatt
      421 gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat cgttgttagg
      481 acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg gtccagttct
      541 ctttgaggtg acctatcgac caagatatgt tctttaatta aaggtattgg acgtcgtttt
      601 acaaatattg tgtgcaacaa atctatatga acaaaaggta ggattaagga ttagttgaag
      661 attatgccta atgaacttaa agatgatgct cacactacaa agttaacaaa tgtcaaagtg
      721 aaaaatcagc atttcatgaa aaatggaaga tctgctgcta acgcttgata tcattgctga
      781 agttgatgtt tacaagtggg accctgagaa ttacctgcta tatgcaggcc aatctaaact
      841 taaaactggt gacagacaat ggttcttttt cagccctcga gatagaaagt acccgaatgg
      901 tagatcaagt cgagcaacac cgaacgggta ctggaaagca accggtaaag acaaaatcat
      961 caaacgtaat gatgtttgta atcacgatca tcaagaatat caaagcataa tgagtattca
     1021 aaacattcat gagcctgttc ctaacccttc atcagattgc atggcaagat gagttaatat
     1081 gtggctactg ttcctttagc aaaatgacac aagtgtttgc attctgcttc atttgctttg
     1141 aatgacatac aagggaagcc aatggtcaat tcatgatgat gcagagtcat ttagtttcaa
     1201 gatttattaa gatgtggaga gttatttagt ttcgagattt attatgatgt agtgttttaa
     1261 tagcatatga gaacccgtaa cattatactc aggagttgat atttgccaat tatattattt
     1321 aactcaaatt gattttgcat gtttgtgtca gattttctcc ttaatactta acaagtatgt
     1381 ttctttgtga agctaaaact attagttata ttttgtcgtg attcaacaag ttcgataaac
     1441 actatgctaa tctttagtgt tttttaagtg atgtgtagcg cacaggctca taaaatcttt
     1501 gtatgatcta gaggctcatg tt
//
LOCUS       XR_011757005            1807 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X18, misc_RNA.
ACCESSION   XR_011757005
VERSION     XR_011757005.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1807
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1807
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X18"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ttttatgaaa ctctaattat tcaaacgaat acccttttgt tacaacccta atttcactct
       61 taatcggatt ccgttaacca tccaacattc atcggtttaa cgtttttgat ttttggagtt
      121 catcgatcta caatcaaaat aatcaataca aatatatgcc gtatgttatt ttatcacaga
      181 tgatttacgg tgccctaatc ccacaaatgg caaacagttt cgatcgattg cgattgtgaa
      241 gcatatgttc gattttacgg cataagcaat cgttgtgagg tccagttctc tttgaggtga
      301 cctatcgacc aagatatgtt ctttaattaa aggtattgga cgtcgtttta caaatattgt
      361 gtgcaacaaa tctatatgaa caaaaggtat agttaatttt attctatact attgattatt
      421 catattgctt tcaaattaat tttaaggctg ttgattttat ctaattataa tattatgaat
      481 agttacatac acatttataa agttcctgca aatcattagg ctatcacata acttttcgtt
      541 aaagcttgtg acgttttaat ttttatatga aataggaaat ggtaaatcgg gctggtcatt
      601 tgattatcga acaaaattag gtattttact ctcactacct caattttagt tactctacga
      661 agttgtatag acggagatag aagcctttgt gattcaacac attttgactg tactagaagg
      721 accatatttt gacccactat ccaacttgac ctgtttgctg tgagcactac agattatggt
      781 taatacaata tctgcttctt tttagtagtt gcatagtatt gttaagtaat aattgatttg
      841 tcgttactga ttatgagttt cacgataggt cttcatgaat cttttaggtt gcacttacta
      901 acttgattca tgtaatctac aggtaggatt aaggattagt tgaagattat gcctaatgaa
      961 cttaaagatg atgctcacac tacaaagtta acaaatgtca aagtgaaaaa tcagcatttc
     1021 atgaaaaatg gaagatctgc tgctaacgct tgatatcatt gctgaagttg atgtttacaa
     1081 gtgggaccct gagaattacc tgctatatgc aggccaatct aaacttaaaa ctggtgacag
     1141 acaatggttc tttttcagcc ctcgagatag aaagtacccg aatggtagat caagtcgagc
     1201 aacaccgaac gggtactgga aagcaaccgg taaagacaaa atcatcaaac gtaatgatgt
     1261 ttgtaatcac gatcatcaag aatatcaaag cataatgagt attcaaaaca ttcatgagcc
     1321 tgttcctaac ccttcatcag attgcatggc aagatgagtt aatatgtggc tactgttcct
     1381 ttagcaaaat gacacaagtg tttgcattct gcttcatttg ctttgaatga catacaaggg
     1441 aagccaatgg tcaattcatg atgatgcaga gtcatttagt ttcaagattt attaagatgt
     1501 ggagagttat ttagtttcga gatttattat gatgtagtgt tttaatagca tatgagaacc
     1561 cgtaacatta tactcaggag ttgatatttg ccaattatat tatttaactc aaattgattt
     1621 tgcatgtttg tgtcagattt tctccttaat acttaacaag tatgtttctt tgtgaagcta
     1681 aaactattag ttatattttg tcgtgattca acaagttcga taaacactat gctaatcttt
     1741 agtgtttttt aagtgatgtg tagcgcacag gctcataaaa tctttgtatg atctagaggc
     1801 tcatgtt
//
LOCUS       XR_011757006            1909 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X19, misc_RNA.
ACCESSION   XR_011757006
VERSION     XR_011757006.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1909
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1909
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X19"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgt ttcgatcgat tgcgattgtg aagcatatgt tcgattttac
      361 ggcataagca atcgttgtga ggtccagttc tctttgaggt gacctatcga ccaagatatg
      421 ttctttaatt aaaggtattg gacgtcgttt tacaaatatt gtgtgcaaca aatctatatg
      481 aacaaaaggt atagttaatt ttattctata ctattgatta ttcatattgc tttcaaatta
      541 attttaaggc tgttgatttt atctaattat aatattatga atagttacat acacatttat
      601 aaagttcctg caaatcatta ggctatcaca taacttttcg ttaaagcttg tgacgtttta
      661 atttttatat gaaataggaa atggtaaatc gggctggtca tttgattatc gaacaaaatt
      721 aggtatttta ctctcactac ctcaatttta gttactctac gaagttgtat agacggagat
      781 agaagccttt gtgattcaac acattttgac tgtactagaa ggaccatatt ttgacccact
      841 atccaacttg acctgtttgc tgtgagcact acagattatg gttaatacaa tatctgcttc
      901 tttttagtag ttgcatagta ttgttaagta ataattgatt tgtcgttact gattatgagt
      961 ttcacgatag gtcttcatga atcttttagg ttgcacttac taacttgatt catgtaatct
     1021 acaggtagga ttaaggatta gttgaagatt atgcctaatg aacttaaaga tgatgctcac
     1081 actacaaagt taacaaatgt caaagtgaaa aatcagcatt tcatgaaaaa tggaagatct
     1141 gctgctaacg cttgatatca ttgctgaagt tgatgtttac aagtgggacc ctgagaatta
     1201 cctgctatat gcaggccaat ctaaacttaa aactggtgac agacaatggt tctttttcag
     1261 ccctcgagat agaaagtacc cgaatggtag atcaagtcga gcaacaccga acgggtactg
     1321 gaaagcaacc ggtaaagaca aaatcatcaa acgtaatgat gtttgtaatc acgatcatca
     1381 agaatatcaa agcataatga gtattcaaaa cattcatgag cctgttccta acccttcatc
     1441 agattgcatg gcaagatgag ttaatatgtg gctactgttc ctttagcaaa atgacacaag
     1501 tgtttgcatt ctgcttcatt tgctttgaat gacatacaag ggaagccaat ggtcaattca
     1561 tgatgatgca gagtcattta gtttcaagat ttattaagat gtggagagtt atttagtttc
     1621 gagatttatt atgatgtagt gttttaatag catatgagaa cccgtaacat tatactcagg
     1681 agttgatatt tgccaattat attatttaac tcaaattgat tttgcatgtt tgtgtcagat
     1741 tttctcctta atacttaaca agtatgtttc tttgtgaagc taaaactatt agttatattt
     1801 tgtcgtgatt caacaagttc gataaacact atgctaatct ttagtgtttt ttaagtgatg
     1861 tgtagcgcac aggctcataa aatctttgta tgatctagag gctcatgtt
//
LOCUS       XR_011757007            1726 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X20, misc_RNA.
ACCESSION   XR_011757007
VERSION     XR_011757007.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1726
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1726
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X20"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgg gcaaacagtt tcgatcgatt gcgattgtga agcatatgtt
      361 cgattttacg gcataagcaa tcgttgtgag gacgtgaggt aatgcaatct tatttgttgt
      421 agtggacgaa cgataatgac ggtccagttc tctttgaggt gacctatcga ccaagatatg
      481 ttctttaatt aaaggaaatg gtaaatcggg ctggtcattt gattatcgaa caaaattagg
      541 tattttactc tcactacctc aattttagtt actctacgaa gttgtataga cggagataga
      601 agcctttgtg attcaacaca ttttgactgt actagaagga ccatattttg acccactatc
      661 caacttgacc tgtttgctgt gagcactaca gattatggtt aatacaatat ctgcttcttt
      721 ttagtagttg catagtattg ttaagtaata attgatttgt cgttactgat tatgagtttc
      781 acgataggtc ttcatgaatc ttttaggttg cacttactaa cttgattcat gtaatctaca
      841 ggtaggatta aggattagtt gaagattatg cctaatgaac ttaaagatga tgctcacact
      901 acaaagttaa caaatgtcaa agtgaaaaat cagcatttca tgaaaaatgg aagatctgct
      961 gctaacgctt gatatcattg ctgaagttga tgtttacaag tgggaccctg agaattacct
     1021 gctatatgca ggccaatcta aacttaaaac tggtgacaga caatggttct ttttcagccc
     1081 tcgagataga aagtacccga atggtagatc aagtcgagca acaccgaacg ggtactggaa
     1141 agcaaccggt aaagacaaaa tcatcaaacg taatgatgtt tgtaatcacg atcatcaaga
     1201 atatcaaagc ataatgagta ttcaaaacat tcatgagcct gttcctaacc cttcatcaga
     1261 ttgcatggca agatgagtta atatgtggct actgttcctt tagcaaaatg acacaagtgt
     1321 ttgcattctg cttcatttgc tttgaatgac atacaaggga agccaatggt caattcatga
     1381 tgatgcagag tcatttagtt tcaagattta ttaagatgtg gagagttatt tagtttcgag
     1441 atttattatg atgtagtgtt ttaatagcat atgagaaccc gtaacattat actcaggagt
     1501 tgatatttgc caattatatt atttaactca aattgatttt gcatgtttgt gtcagatttt
     1561 ctccttaata cttaacaagt atgtttcttt gtgaagctaa aactattagt tatattttgt
     1621 cgtgattcaa caagttcgat aaacactatg ctaatcttta gtgtttttta agtgatgtgt
     1681 agcgcacagg ctcataaaat ctttgtatga tctagaggct catgtt
//
LOCUS       XR_011757008            1675 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X21, misc_RNA.
ACCESSION   XR_011757008
VERSION     XR_011757008.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1675
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1675
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X21"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 taacacatac agagctcttt tcatccattc tctctcacct caaatttatc tctcctctca
       61 aaataaaaat aaaaacgacc gacaccatgc catctcttcc gccatttttc tgctccgacg
      121 tcgtcaaact gtaacagaaa aggtgtagta ttaatccatt catttttaca atcatatcgg
      181 taccgattaa tcttaatacc accgctgctc gatgaatcgc ttcggtccga tgaacagaag
      241 ttcgctagaa agtctaagcc cgacaaagtt cagtcttttg atactacacc ggtcaccatc
      301 cacaattcat cttattccgg gcaaacagtt tcgatcgatt gcgattgtga agcatatgtt
      361 cgattttacg gcataagcaa tcgttgtgag gtccagttct ctttgaggtg acctatcgac
      421 caagatatgt tctttaatta aaggaaatgg taaatcgggc tggtcatttg attatcgaac
      481 aaaattaggt attttactct cactacctca attttagtta ctctacgaag ttgtatagac
      541 ggagatagaa gcctttgtga ttcaacacat tttgactgta ctagaaggac catattttga
      601 cccactatcc aacttgacct gtttgctgtg agcactacag attatggtta atacaatatc
      661 tgcttctttt tagtagttgc atagtattgt taagtaataa ttgatttgtc gttactgatt
      721 atgagtttca cgataggtct tcatgaatct tttaggttgc acttactaac ttgattcatg
      781 taatctacag gtaggattaa ggattagttg aagattatgc ctaatgaact taaagatgat
      841 gctcacacta caaagttaac aaatgtcaaa gtgaaaaatc agcatttcat gaaaaatgga
      901 agatctgctg ctaacgcttg atatcattgc tgaagttgat gtttacaagt gggaccctga
      961 gaattacctg ctatatgcag gccaatctaa acttaaaact ggtgacagac aatggttctt
     1021 tttcagccct cgagatagaa agtacccgaa tggtagatca agtcgagcaa caccgaacgg
     1081 gtactggaaa gcaaccggta aagacaaaat catcaaacgt aatgatgttt gtaatcacga
     1141 tcatcaagaa tatcaaagca taatgagtat tcaaaacatt catgagcctg ttcctaaccc
     1201 ttcatcagat tgcatggcaa gatgagttaa tatgtggcta ctgttccttt agcaaaatga
     1261 cacaagtgtt tgcattctgc ttcatttgct ttgaatgaca tacaagggaa gccaatggtc
     1321 aattcatgat gatgcagagt catttagttt caagatttat taagatgtgg agagttattt
     1381 agtttcgaga tttattatga tgtagtgttt taatagcata tgagaacccg taacattata
     1441 ctcaggagtt gatatttgcc aattatatta tttaactcaa attgattttg catgtttgtg
     1501 tcagattttc tccttaatac ttaacaagta tgtttctttg tgaagctaaa actattagtt
     1561 atattttgtc gtgattcaac aagttcgata aacactatgc taatctttag tgttttttaa
     1621 gtgatgtgta gcgcacaggc tcataaaatc tttgtatgat ctagaggctc atgtt
//
LOCUS       XR_011757009            1393 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X22, misc_RNA.
ACCESSION   XR_011757009
VERSION     XR_011757009.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1393
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1393
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X22"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga gcaatcgttg ttaggacgtg aggtaatgca
      421 atcttatttg ttgtagtgga cgaacgataa tgacggtcca gttctctttg aggtgaccta
      481 tcgaccaaga tatgttcttt aattaaaggt aggattaagg attagttgaa gattatgcct
      541 aatgaactta aagatgatgc tcacactaca aagttaacaa atgtcaaagt gaaaaatcag
      601 catttcatga aaaatggaag atctgctgct aacgcttgat atcattgctg aagttgatgt
      661 ttacaagtgg gaccctgaga attacctgct atatgcaggc caatctaaac ttaaaactgg
      721 tgacagacaa tggttctttt tcagccctcg agatagaaag tacccgaatg gtagatcaag
      781 tcgagcaaca ccgaacgggt actggaaagc aaccggtaaa gacaaaatca tcaaacgtaa
      841 tgatgtttgt aatcacgatc atcaagaata tcaaagcata atgagtattc aaaacattca
      901 tgagcctgtt cctaaccctt catcagattg catggcaaga tgagttaata tgtggctact
      961 gttcctttag caaaatgaca caagtgtttg cattctgctt catttgcttt gaatgacata
     1021 caagggaagc caatggtcaa ttcatgatga tgcagagtca tttagtttca agatttatta
     1081 agatgtggag agttatttag tttcgagatt tattatgatg tagtgtttta atagcatatg
     1141 agaacccgta acattatact caggagttga tatttgccaa ttatattatt taactcaaat
     1201 tgattttgca tgtttgtgtc agattttctc cttaatactt aacaagtatg tttctttgtg
     1261 aagctaaaac tattagttat attttgtcgt gattcaacaa gttcgataaa cactatgcta
     1321 atctttagtg ttttttaagt gatgtgtagc gcacaggctc ataaaatctt tgtatgatct
     1381 agaggctcat gtt
//
LOCUS       XR_011757010            1380 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X23, misc_RNA.
ACCESSION   XR_011757010
VERSION     XR_011757010.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1380
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1380
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1380
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X23"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga ggacgtgagg taatgcaatc ttatttgttg
      421 tagtggacga acgataatga cggtccagtt ctctttgagg tgacctatcg accaagatat
      481 gttctttaat taaaggtagg attaaggatt agttgaagat tatgcctaat gaacttaaag
      541 atgatgctca cactacaaag ttaacaaatg tcaaagtgaa aaatcagcat ttcatgaaaa
      601 atggaagatc tgctgctaac gcttgatatc attgctgaag ttgatgttta caagtgggac
      661 cctgagaatt acctgctata tgcaggccaa tctaaactta aaactggtga cagacaatgg
      721 ttctttttca gccctcgaga tagaaagtac ccgaatggta gatcaagtcg agcaacaccg
      781 aacgggtact ggaaagcaac cggtaaagac aaaatcatca aacgtaatga tgtttgtaat
      841 cacgatcatc aagaatatca aagcataatg agtattcaaa acattcatga gcctgttcct
      901 aacccttcat cagattgcat ggcaagatga gttaatatgt ggctactgtt cctttagcaa
      961 aatgacacaa gtgtttgcat tctgcttcat ttgctttgaa tgacatacaa gggaagccaa
     1021 tggtcaattc atgatgatgc agagtcattt agtttcaaga tttattaaga tgtggagagt
     1081 tatttagttt cgagatttat tatgatgtag tgttttaata gcatatgaga acccgtaaca
     1141 ttatactcag gagttgatat ttgccaatta tattatttaa ctcaaattga ttttgcatgt
     1201 ttgtgtcaga ttttctcctt aatacttaac aagtatgttt ctttgtgaag ctaaaactat
     1261 tagttatatt ttgtcgtgat tcaacaagtt cgataaacac tatgctaatc tttagtgttt
     1321 tttaagtgat gtgtagcgca caggctcata aaatctttgt atgatctaga ggctcatgtt
//
LOCUS       XR_011757011            1383 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X24, misc_RNA.
ACCESSION   XR_011757011
VERSION     XR_011757011.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1383
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1383
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X24"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga ggtccagttc tctttgaggt gacctatcga
      421 ccaagatatg ttctttaatt aaaggtattg gacgtcgttt tacaaatatt gtgtgcaaca
      481 aatctatatg aacaaaaggt aggattaagg attagttgaa gattatgcct aatgaactta
      541 aagatgatgc tcacactaca aagttaacaa atgtcaaagt gaaaaatcag catttcatga
      601 aaaatggaag atctgctgct aacgcttgat atcattgctg aagttgatgt ttacaagtgg
      661 gaccctgaga attacctgct atatgcaggc caatctaaac ttaaaactgg tgacagacaa
      721 tggttctttt tcagccctcg agatagaaag tacccgaatg gtagatcaag tcgagcaaca
      781 ccgaacgggt actggaaagc aaccggtaaa gacaaaatca tcaaacgtaa tgatgtttgt
      841 aatcacgatc atcaagaata tcaaagcata atgagtattc aaaacattca tgagcctgtt
      901 cctaaccctt catcagattg catggcaaga tgagttaata tgtggctact gttcctttag
      961 caaaatgaca caagtgtttg cattctgctt catttgcttt gaatgacata caagggaagc
     1021 caatggtcaa ttcatgatga tgcagagtca tttagtttca agatttatta agatgtggag
     1081 agttatttag tttcgagatt tattatgatg tagtgtttta atagcatatg agaacccgta
     1141 acattatact caggagttga tatttgccaa ttatattatt taactcaaat tgattttgca
     1201 tgtttgtgtc agattttctc cttaatactt aacaagtatg tttctttgtg aagctaaaac
     1261 tattagttat attttgtcgt gattcaacaa gttcgataaa cactatgcta atctttagtg
     1321 ttttttaagt gatgtgtagc gcacaggctc ataaaatctt tgtatgatct agaggctcat
     1381 gtt
//
LOCUS       XR_011757012            1329 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X25, misc_RNA.
ACCESSION   XR_011757012
VERSION     XR_011757012.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1329
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1329
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X25"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat ctctcctctc
       61 aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt ctgctccgac
      121 gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac aatcatatcg
      181 gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg atgaacagaa
      241 gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac cggtcaccat
      301 ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg aagcatatgt
      361 tcgattttac ggcataagca atcgttgtga ggtccagttc tctttgaggt gacctatcga
      421 ccaagatatg ttctttaatt aaaggtagga ttaaggatta gttgaagatt atgcctaatg
      481 aacttaaaga tgatgctcac actacaaagt taacaaatgt caaagtgaaa aatcagcatt
      541 tcatgaaaaa tggaagatct gctgctaacg cttgatatca ttgctgaagt tgatgtttac
      601 aagtgggacc ctgagaatta cctgctatat gcaggccaat ctaaacttaa aactggtgac
      661 agacaatggt tctttttcag ccctcgagat agaaagtacc cgaatggtag atcaagtcga
      721 gcaacaccga acgggtactg gaaagcaacc ggtaaagaca aaatcatcaa acgtaatgat
      781 gtttgtaatc acgatcatca agaatatcaa agcataatga gtattcaaaa cattcatgag
      841 cctgttccta acccttcatc agattgcatg gcaagatgag ttaatatgtg gctactgttc
      901 ctttagcaaa atgacacaag tgtttgcatt ctgcttcatt tgctttgaat gacatacaag
      961 ggaagccaat ggtcaattca tgatgatgca gagtcattta gtttcaagat ttattaagat
     1021 gtggagagtt atttagtttc gagatttatt atgatgtagt gttttaatag catatgagaa
     1081 cccgtaacat tatactcagg agttgatatt tgccaattat attatttaac tcaaattgat
     1141 tttgcatgtt tgtgtcagat tttctcctta atacttaaca agtatgtttc tttgtgaagc
     1201 taaaactatt agttatattt tgtcgtgatt caacaagttc gataaacact atgctaatct
     1261 ttagtgtttt ttaagtgatg tgtagcgcac aggctcataa aatctttgta tgatctagag
     1321 gctcatgtt
//
LOCUS       XM_071829717            2035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X26, mRNA.
ACCESSION   XM_071829717
VERSION     XM_071829717.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2035
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     CDS             1377..1658
                     /gene="LOC139839604"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685818.1"
                     /db_xref="GeneID:139839604"
                     /translation="MEDLLLTLDIIAEVDVYKWDPENYLANLNLKLVTDNGSFSALEI
                     ESTRMVDQVEQHRTGTGKQPIAWQDELICGYCSFSKMTQVFAFCFICFE"
ORIGIN      
        1 tgaacaataa cacatacaga gctcttttca tccattctct ctcacctcaa atttatctct
       61 cctctcaaaa taaaaataaa aacgaccgac accatgccat ctcttccgcc atttttctgc
      121 tccgacgtcg tcaaactgta acagaaaagg tgtagtatta atccattcat ttttacaatc
      181 atatcggtac cgattaatct taataccacc gctgctcgat gaatcgcttc ggtccgatga
      241 acagaagttc gctagaaagt ctaagcccga caaagttcag tcttttgata ctacaccggt
      301 caccatccac aattcatctt attccgggca aacagtttcg atcgattgcg attgtgaagc
      361 atatgttcga ttttacggca taagcaatcg ttgtgaggta atgcaatctt caatatttaa
      421 tcgattgatt tttgaatttt aatagtaatt tgaagctctt attgttcata agcaatcgtt
      481 gttaggacgt gaggtaatgc aatcttattt gttgtagtgg acgaacgata atgacggtac
      541 cttcgctgct atttgtgtta ctatctgatt tacaatattt aattcattct tcaaagtcat
      601 ttatctgtta acaatgtaaa tgaatcaggt ccagttctct ttgaggtgac ctatcgacca
      661 agatatgttc tttaattaaa ggtattggac gtcgttttac aaatattgtg tgcaacaaat
      721 ctatatgaac aaaaggtata gttaatttta ttctatacta ttgattattc atattgcttt
      781 caaattaatt ttaaggctgt tgattttatc taattataat attatgaata gttacataca
      841 catttataaa gttcctgcaa atcattaggc tatcacataa cttttcgtta aagcttgtga
      901 cgttttaatt tttatatgaa ataggaaatg gtaaatcggg ctggtcattt gattatcgaa
      961 caaaattagg tattttactc tcactacctc aattttagtt actctacgaa gttgtataga
     1021 cggagataga agcctttgtg attcaacaca ttttgactgt actagaagga ccatattttg
     1081 acccactatc caacttgacc tgtttgctgt gagcactaca gattatggtt aatacaatat
     1141 ctgcttcttt ttagtagttg catagtattg ttaagtaata attgatttgt cgttactgat
     1201 tatgagtttc acgataggtc ttcatgaatc ttttaggttg cacttactaa cttgattcat
     1261 gtaatctaca ggtaggatta aggattagtt gaagattatg cctaatgaac ttaaagatga
     1321 tgctcacact acaaagttaa caaatgtcaa agtgaaaaat cagcatttca tgaaaaatgg
     1381 aagatctgct gctaacgctt gatatcattg ctgaagttga tgtttacaag tgggaccctg
     1441 agaattacct ggccaatcta aacttaaaac tggtgacaga caatggttct ttttcagccc
     1501 tcgagataga aagtacccga atggtagatc aagtcgagca acaccgaacg ggtactggaa
     1561 agcaaccgat tgcatggcaa gatgagttaa tatgtggcta ctgttccttt agcaaaatga
     1621 cacaagtgtt tgcattctgc ttcatttgct ttgaatgaca tacaagggaa gccaatggtc
     1681 aattcatgat gatgcagagt catttagttt caagatttat taagatgtgg agagttattt
     1741 agtttcgaga tttattatga tgtagtgttt taatagcata tgagaacccg taacattata
     1801 ctcaggagtt gatatttgcc aattatatta tttaactcaa attgattttg catgtttgtg
     1861 tcagattttc tccttaatac ttaacaagta tgtttctttg tgaagctaaa actattagtt
     1921 atattttgtc gtgattcaac aagttcgata aacactatgc taatctttag tgttttttaa
     1981 gtgatgtgta gcgcacaggc tcataaaatc tttgtatgat ctagaggctc atgtt
//
LOCUS       XR_011757013            2403 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X27, misc_RNA.
ACCESSION   XR_011757013
VERSION     XR_011757013.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2403
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2403
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X27"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 gttgaacaat aacacataca gagctctttt catccattct ctctcacctc aaatttatct
       61 ctcctctcaa aataaaaata aaaacgaccg acaccatgcc atctcttccg ccatttttct
      121 gctccgacgt cgtcaaactg taacagaaaa ggtgtagtat taatccattc atttttacaa
      181 tcatatcggt accgattaat cttaatacca ccgctgctcg atgaatcgct tcggtccgat
      241 gaacagaagt tcgctagaaa gtctaagccc gacaaagttc agtcttttga tactacaccg
      301 gtcaccatcc acaattcatc ttattccggg caaacagttt cgatcgattg cgattgtgaa
      361 gcatatgttc gattttacgg cataagcaat cgttgtgagg taatgcaatc ttcaatattt
      421 aatcgattga tttttgaatt ttaatagtaa tttgaagctc ttattgttca taagcaatcg
      481 ttgttaggac gtgaggtaat gcaatcttat ttgttgtagt ggacgaacga taatgacggt
      541 accttcgctg ctatttgtgt tactatctga tttacaatat ttaattcatt cttcaaagtc
      601 atttatctgt taacaatgta aatgaatcag gtccagttct ctttgaggtg acctatcgac
      661 caagatatgt tctttaatta aaggtattgg acgtcgtttt acaaatattg tgtgcaacaa
      721 atctatatga acaaaaggta tagttaattt tattctatac tattgattat tcatattgct
      781 ttcaaattaa ttttaaggct gttgatttta tctaattata atattatgaa tagttacata
      841 cacatttata aagttcctgc aaatcattag gctatcacat aacttttcgt taaagcttgt
      901 gacgttttaa tttttatatg aaataggaaa tggtaaatcg ggctggtcat ttgattatcg
      961 aacaaaatta ggtattttac tctcactacc tcaattttag ttactctacg aagttgtata
     1021 gacggagata gaagcctttg tgattcaaca cattttgact gtactagaag gaccatattt
     1081 tgacccacta tccaacttga cctgtttgct gtgagcacta cagattatgg ttaatacaat
     1141 atctgcttct ttttagtagt tgcatagtat tgttaagtaa taattgattt gtcgttactg
     1201 attatgagtt tcacgatagg tcttcatgaa tcttttaggt tgcacttact aacttgattc
     1261 atgtaatcta caggtaggat taaggattag ttgaagatta tgcctaatga acttaaagat
     1321 gatgctcaca ctacaaagtt aacaaatgtc aaagtgaaaa atcagcattt catgaaaaat
     1381 ggaacctttt cattgctcac taattttgtt tcttttcatc caactgatga agaattggtt
     1441 ctttattatc ttaaaaggaa gatctgctgc taacgcttga tatcattgct gaagttgatg
     1501 tttacaagtg ggaccctgag aattacctgg ccaatctaaa cttaaaactg gtgacagaca
     1561 atggttcttt ttcagccctc gagatagaaa gtacccgaat ggtagatcaa gtcgagcaac
     1621 accgaacggg tactggaaag caaccggtaa agacaaaatc atcaaacgta atgatgtttg
     1681 taatcacgat catcaagaat atcaaagcat aatgagtatt caaaacattc atgagcctgt
     1741 tcctaaccct tcatcaggta cctaaataaa aatttaaaat gggcactaca agtatgttca
     1801 caagtggatc acactaggtt gtctctttac ttgtgggccc gaaaattata aatttcttct
     1861 gtcaatgatg tacctttcaa tttcaaggtt tctctattga aggtgaaaca tctaattttt
     1921 ctatttactt tataagattg catggcaaga tgagttaata tgtggctact gttcctttag
     1981 caaaatgaca caagtgtttg cattctgctt catttgcttt gaatgacata caagggaagc
     2041 caatggtcaa ttcatgatga tgcagagtca tttagtttca agatttatta agatgtggag
     2101 agttatttag tttcgagatt tattatgatg tagtgtttta atagcatatg agaacccgta
     2161 acattatact caggagttga tatttgccaa ttatattatt taactcaaat tgattttgca
     2221 tgtttgtgtc agattttctc cttaatactt aacaagtatg tttctttgtg aagctaaaac
     2281 tattagttat attttgtcgt gattcaacaa gttcgataaa cactatgcta atctttagtg
     2341 ttttttaagt gatgtgtagc gcacaggctc ataaaatctt tgtatgatct agaggctcat
     2401 gtt
//
LOCUS       XR_011757014            2352 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X28, misc_RNA.
ACCESSION   XR_011757014
VERSION     XR_011757014.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2352
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2352
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X28"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 gttgaacaat aacacataca gagctctttt catccattct ctctcacctc aaatttatct
       61 ctcctctcaa aataaaaata aaaacgaccg acaccatgcc atctcttccg ccatttttct
      121 gctccgacgt cgtcaaactg taacagaaaa ggtgtagtat taatccattc atttttacaa
      181 tcatatcggt accgattaat cttaatacca ccgctgctcg atgaatcgct tcggtccgat
      241 gaacagaagt tcgctagaaa gtctaagccc gacaaagttc agtcttttga tactacaccg
      301 gtcaccatcc acaattcatc ttattccggg caaacagttt cgatcgattg cgattgtgaa
      361 gcatatgttc gattttacgg cataagcaat cgttgtgagg taatgcaatc ttcaatattt
      421 aatcgattga tttttgaatt ttaatagtaa tttgaagctc ttattgttca taagcaatcg
      481 ttgttaggac gtgaggtaat gcaatcttat ttgttgtagt ggacgaacga taatgacggt
      541 accttcgctg ctatttgtgt tactatctga tttacaatat ttaattcatt cttcaaagtc
      601 atttatctgt taacaatgta aatgaatcag gtccagttct ctttgaggtg acctatcgac
      661 caagatatgt tctttaatta aaggtattgg acgtcgtttt acaaatattg tgtgcaacaa
      721 atctatatga acaaaaggta tagttaattt tattctatac tattgattat tcatattgct
      781 ttcaaattaa ttttaaggct gttgatttta tctaattata atattatgaa tagttacata
      841 cacatttata aagttcctgc aaatcattag gctatcacat aacttttcgt taaagcttgt
      901 gacgttttaa tttttatatg aaataggaaa tggtaaatcg ggctggtcat ttgattatcg
      961 aacaaaatta ggtattttac tctcactacc tcaattttag ttactctacg aagttgtata
     1021 gacggagata gaagcctttg tgattcaaca cattttgact gtactagaag gaccatattt
     1081 tgacccacta tccaacttga cctgtttgct gtgagcacta cagattatgg ttaatacaat
     1141 atctgcttct ttttagtagt tgcatagtat tgttaagtaa taattgattt gtcgttactg
     1201 attatgagtt tcacgatagg tcttcatgaa tcttttaggt tgcacttact aacttgattc
     1261 atgtaatcta caggtaggat taaggattag ttgaagatta tgcctaatga acttaaagat
     1321 gatgctcaca ctacaaagtt aacaaatgtc aaagtgaaaa atcagcattt catgaaaaat
     1381 gaattggttc tttattatct taaaaggaag atctgctgct aacgcttgat atcattgctg
     1441 aagttgatgt ttacaagtgg gaccctgaga attacctggc caatctaaac ttaaaactgg
     1501 tgacagacaa tggttctttt tcagccctcg agatagaaag tacccgaatg gtagatcaag
     1561 tcgagcaaca ccgaacgggt actggaaagc aaccggtaaa gacaaaatca tcaaacgtaa
     1621 tgatgtttgt aatcacgatc atcaagaata tcaaagcata atgagtattc aaaacattca
     1681 tgagcctgtt cctaaccctt catcaggtac ctaaataaaa atttaaaatg ggcactacaa
     1741 gtatgttcac aagtggatca cactaggttg tctctttact tgtgggcccg aaaattataa
     1801 atttcttctg tcaatgatgt acctttcaat ttcaaggttt ctctattgaa ggtgaaacat
     1861 ctaatttttc tatttacttt ataagattgc atggcaagat gagttaatat gtggctactg
     1921 ttcctttagc aaaatgacac aagtgtttgc attctgcttc atttgctttg aatgacatac
     1981 aagggaagcc aatggtcaat tcatgatgat gcagagtcat ttagtttcaa gatttattaa
     2041 gatgtggaga gttatttagt ttcgagattt attatgatgt agtgttttaa tagcatatga
     2101 gaacccgtaa cattatactc aggagttgat atttgccaat tatattattt aactcaaatt
     2161 gattttgcat gtttgtgtca gattttctcc ttaatactta acaagtatgt ttctttgtga
     2221 agctaaaact attagttata ttttgtcgtg attcaacaag ttcgataaac actatgctaa
     2281 tctttagtgt tttttaagtg atgtgtagcg cacaggctca taaaatcttt gtatgatcta
     2341 gaggctcatg tt
//
LOCUS       XR_011757015            2106 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X29, misc_RNA.
ACCESSION   XR_011757015
VERSION     XR_011757015.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2106
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..2106
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X29"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 caacggttga acaataacac atacagagct cttttcatcc attctctctc acctcaaatt
       61 tatctctcct ctcaaaataa aaataaaaac gaccgacacc atgccatctc ttccgccatt
      121 tttctgctcc gacgtcgtca aactgtaaca gaaaaggtgt agtattaatc cattcatttt
      181 tacaatcata tcggtaccga ttaatcttaa taccaccgct gctcgatgaa tcgcttcggt
      241 ccgatgaaca gaagttcgct agaaagtcta agcccgacaa agttcagtct tttgatacta
      301 caccggtcac catccacaat tcatcttatt ccgggcaaac agtttcgatc gattgcgatt
      361 gtgaagcata tgttcgattt tacggcataa gcaatcgttg tgaggtaatg caatcttcaa
      421 tatttaatcg attgattttt gaattttaat agtaatttga agctcttatt gttcataagc
      481 aatcgttgtt aggacgtgag gtaatgcaat cttatttgtt gtagtggacg aacgataatg
      541 acggtacctt cgctgctatt tgtgttacta tctgatttac aatatttaat tcattcttca
      601 aagtcattta tctgttaaca atgtaaatga atcaggtcca gttctctttg aggtgaccta
      661 tcgaccaaga tatgttcttt aattaaaggt attggacgtc gttttacaaa tattgtgtgc
      721 aacaaatcta tatgaacaaa aggtatagtt aattttattc tatactattg attattcata
      781 ttgctttcaa attaatttta aggctgttga ttttatctaa ttataatatt atgaatagtt
      841 acatacacat ttataaagtt cctgcaaatc attaggctat cacataactt ttcgttaaag
      901 cttgtgacgt tttaattttt atatgaaata ggaaatggta aatcgggctg gtcatttgat
      961 tatcgaacaa aattaggtag gattaaggat tagttgaaga ttatgcctaa tgaacttaaa
     1021 gatgatgctc acactacaaa gttaacaaat gtcaaagtga aaaatcagca tttcatgaaa
     1081 aatggaacct tttcattgct cactaatttt gtttcttttc atccaactga tgaagaattg
     1141 gttctttatt atcttaaaag gaagatctgc tgctaacgct tgatatcatt gctgaagttg
     1201 atgtttacaa gtgggaccct gagaattacc tggccaatct aaacttaaaa ctggtgacag
     1261 acaatggttc tttttcagcc ctcgagatag aaagtacccg aatggtagat caagtcgagc
     1321 aacaccgaac gggtactgga aagcaaccgg taaagacaaa atcatcaaac gtaatgatgt
     1381 ttgtaatcac gatcatcaag aatatcaaag cataatgagt attcaaaaca ttcatgagcc
     1441 tgttcctaac ccttcatcag gtacctaaat aaaaatttaa aatgggcact acaagtatgt
     1501 tcacaagtgg atcacactag gttgtctctt tacttgtggg cccgaaaatt ataaatttct
     1561 tctgtcaatg atgtaccttt caatttcaag gtttctctat tgaaggtgaa acatctaatt
     1621 tttctattta ctttataaga ttgcatggca agatgagtta atatgtggct actgttcctt
     1681 tagcaaaatg acacaagtgt ttgcattctg cttcatttgc tttgaatgac atacaaggga
     1741 agccaatggt caattcatga tgatgcagag tcatttagtt tcaagattta ttaagatgtg
     1801 gagagttatt tagtttcgag atttattatg atgtagtgtt ttaatagcat atgagaaccc
     1861 gtaacattat actcaggagt tgatatttgc caattatatt atttaactca aattgatttt
     1921 gcatgtttgt gtcagatttt ctccttaata cttaacaagt atgtttcttt gtgaagctaa
     1981 aactattagt tatattttgt cgtgattcaa caagttcgat aaacactatg ctaatcttta
     2041 gtgtttttta agtgatgtgt agcgcacagg ctcataaaat ctttgtatga tctagaggct
     2101 catgtt
//
LOCUS       XR_011757016            1869 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X30, misc_RNA.
ACCESSION   XR_011757016
VERSION     XR_011757016.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1869
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1869
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X30"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 cggttgaaca ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat
       61 ctctcctctc aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt
      121 ctgctccgac gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac
      181 aatcatatcg gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg
      241 atgaacagaa gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac
      301 cggtcaccat ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg
      361 aagcatatgt tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat
      421 ttaatcgatt gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat
      481 cgttgttagg acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg
      541 gtaccttcgc tgctatttgt gttactatct gatttacaat atttaattca ttcttcaaag
      601 tcatttatct gttaacaatg taaatgaatc aggtccagtt ctctttgagg tgacctatcg
      661 accaagatat gttctttaat taaaggtatt ggacgtcgtt ttacaaatat tgtgtgcaac
      721 aaatctatat gaacaaaagg taggattaag gattagttga agattatgcc taatgaactt
      781 aaagatgatg ctcacactac aaagttaaca aatgtcaaag tgaaaaatca gcatttcatg
      841 aaaaatggaa ccttttcatt gctcactaat tttgtttctt ttcatccaac tgatgaagaa
      901 ttggttcttt attatcttaa aaggaagatc tgctgctaac gcttgatatc attgctgaag
      961 ttgatgttta caagtgggac cctgagaatt acctggccaa tctaaactta aaactggtga
     1021 cagacaatgg ttctttttca gccctcgaga tagaaagtac ccgaatggta gatcaagtcg
     1081 agcaacaccg aacgggtact ggaaagcaac cggtaaagac aaaatcatca aacgtaatga
     1141 tgtttgtaat cacgatcatc aagaatatca aagcataatg agtattcaaa acattcatga
     1201 gcctgttcct aacccttcat caggtaccta aataaaaatt taaaatgggc actacaagta
     1261 tgttcacaag tggatcacac taggttgtct ctttacttgt gggcccgaaa attataaatt
     1321 tcttctgtca atgatgtacc tttcaatttc aaggtttctc tattgaaggt gaaacatcta
     1381 atttttctat ttactttata agattgcatg gcaagatgag ttaatatgtg gctactgttc
     1441 ctttagcaaa atgacacaag tgtttgcatt ctgcttcatt tgctttgaat gacatacaag
     1501 ggaagccaat ggtcaattca tgatgatgca gagtcattta gtttcaagat ttattaagat
     1561 gtggagagtt atttagtttc gagatttatt atgatgtagt gttttaatag catatgagaa
     1621 cccgtaacat tatactcagg agttgatatt tgccaattat attatttaac tcaaattgat
     1681 tttgcatgtt tgtgtcagat tttctcctta atacttaaca agtatgtttc tttgtgaagc
     1741 taaaactatt agttatattt tgtcgtgatt caacaagttc gataaacact atgctaatct
     1801 ttagtgtttt ttaagtgatg tgtagcgcac aggctcataa aatctttgta tgatctagag
     1861 gctcatgtt
//
LOCUS       XR_011757017            1815 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X31, misc_RNA.
ACCESSION   XR_011757017
VERSION     XR_011757017.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1815
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1815
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X31"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 cggttgaaca ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat
       61 ctctcctctc aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt
      121 ctgctccgac gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac
      181 aatcatatcg gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg
      241 atgaacagaa gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac
      301 cggtcaccat ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg
      361 aagcatatgt tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat
      421 ttaatcgatt gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat
      481 cgttgttagg acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg
      541 gtaccttcgc tgctatttgt gttactatct gatttacaat atttaattca ttcttcaaag
      601 tcatttatct gttaacaatg taaatgaatc aggtccagtt ctctttgagg tgacctatcg
      661 accaagatat gttctttaat taaaggtagg attaaggatt agttgaagat tatgcctaat
      721 gaacttaaag atgatgctca cactacaaag ttaacaaatg tcaaagtgaa aaatcagcat
      781 ttcatgaaaa atggaacctt ttcattgctc actaattttg tttcttttca tccaactgat
      841 gaagaattgg ttctttatta tcttaaaagg aagatctgct gctaacgctt gatatcattg
      901 ctgaagttga tgtttacaag tgggaccctg agaattacct ggccaatcta aacttaaaac
      961 tggtgacaga caatggttct ttttcagccc tcgagataga aagtacccga atggtagatc
     1021 aagtcgagca acaccgaacg ggtactggaa agcaaccggt aaagacaaaa tcatcaaacg
     1081 taatgatgtt tgtaatcacg atcatcaaga atatcaaagc ataatgagta ttcaaaacat
     1141 tcatgagcct gttcctaacc cttcatcagg tacctaaata aaaatttaaa atgggcacta
     1201 caagtatgtt cacaagtgga tcacactagg ttgtctcttt acttgtgggc ccgaaaatta
     1261 taaatttctt ctgtcaatga tgtacctttc aatttcaagg tttctctatt gaaggtgaaa
     1321 catctaattt ttctatttac tttataagat tgcatggcaa gatgagttaa tatgtggcta
     1381 ctgttccttt agcaaaatga cacaagtgtt tgcattctgc ttcatttgct ttgaatgaca
     1441 tacaagggaa gccaatggtc aattcatgat gatgcagagt catttagttt caagatttat
     1501 taagatgtgg agagttattt agtttcgaga tttattatga tgtagtgttt taatagcata
     1561 tgagaacccg taacattata ctcaggagtt gatatttgcc aattatatta tttaactcaa
     1621 attgattttg catgtttgtg tcagattttc tccttaatac ttaacaagta tgtttctttg
     1681 tgaagctaaa actattagtt atattttgtc gtgattcaac aagttcgata aacactatgc
     1741 taatctttag tgttttttaa gtgatgtgta gcgcacaggc tcataaaatc tttgtatgat
     1801 ctagaggctc atgtt
//
LOCUS       XR_011757018            1818 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X32, misc_RNA.
ACCESSION   XR_011757018
VERSION     XR_011757018.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1818
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1818
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X32"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 cggttgaaca ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat
       61 ctctcctctc aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt
      121 ctgctccgac gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac
      181 aatcatatcg gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg
      241 atgaacagaa gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac
      301 cggtcaccat ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg
      361 aagcatatgt tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat
      421 ttaatcgatt gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat
      481 cgttgttagg acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg
      541 gtaccttcgc tgctatttgt gttactatct gatttacaat atttaattca ttcttcaaag
      601 tcatttatct gttaacaatg taaatgaatc aggtccagtt ctctttgagg tgacctatcg
      661 accaagatat gttctttaat taaaggtatt ggacgtcgtt ttacaaatat tgtgtgcaac
      721 aaatctatat gaacaaaagg taggattaag gattagttga agattatgcc taatgaactt
      781 aaagatgatg ctcacactac aaagttaaca aatgtcaaag tgaaaaatca gcatttcatg
      841 aaaaatgaat tggttcttta ttatcttaaa aggaagatct gctgctaacg cttgatatca
      901 ttgctgaagt tgatgtttac aagtgggacc ctgagaatta cctggccaat ctaaacttaa
      961 aactggtgac agacaatggt tctttttcag ccctcgagat agaaagtacc cgaatggtag
     1021 atcaagtcga gcaacaccga acgggtactg gaaagcaacc ggtaaagaca aaatcatcaa
     1081 acgtaatgat gtttgtaatc acgatcatca agaatatcaa agcataatga gtattcaaaa
     1141 cattcatgag cctgttccta acccttcatc aggtacctaa ataaaaattt aaaatgggca
     1201 ctacaagtat gttcacaagt ggatcacact aggttgtctc tttacttgtg ggcccgaaaa
     1261 ttataaattt cttctgtcaa tgatgtacct ttcaatttca aggtttctct attgaaggtg
     1321 aaacatctaa tttttctatt tactttataa gattgcatgg caagatgagt taatatgtgg
     1381 ctactgttcc tttagcaaaa tgacacaagt gtttgcattc tgcttcattt gctttgaatg
     1441 acatacaagg gaagccaatg gtcaattcat gatgatgcag agtcatttag tttcaagatt
     1501 tattaagatg tggagagtta tttagtttcg agatttatta tgatgtagtg ttttaatagc
     1561 atatgagaac ccgtaacatt atactcagga gttgatattt gccaattata ttatttaact
     1621 caaattgatt ttgcatgttt gtgtcagatt ttctccttaa tacttaacaa gtatgtttct
     1681 ttgtgaagct aaaactatta gttatatttt gtcgtgattc aacaagttcg ataaacacta
     1741 tgctaatctt tagtgttttt taagtgatgt gtagcgcaca ggctcataaa atctttgtat
     1801 gatctagagg ctcatgtt
//
LOCUS       XR_011757019            1764 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839604), transcript variant X33, misc_RNA.
ACCESSION   XR_011757019
VERSION     XR_011757019.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1764
                     /gene="LOC139839604"
                     /note="uncharacterized LOC139839604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839604"
     misc_RNA        1..1764
                     /gene="LOC139839604"
                     /product="uncharacterized protein, transcript variant X33"
                     /db_xref="GeneID:139839604"
ORIGIN      
        1 cggttgaaca ataacacata cagagctctt ttcatccatt ctctctcacc tcaaatttat
       61 ctctcctctc aaaataaaaa taaaaacgac cgacaccatg ccatctcttc cgccattttt
      121 ctgctccgac gtcgtcaaac tgtaacagaa aaggtgtagt attaatccat tcatttttac
      181 aatcatatcg gtaccgatta atcttaatac caccgctgct cgatgaatcg cttcggtccg
      241 atgaacagaa gttcgctaga aagtctaagc ccgacaaagt tcagtctttt gatactacac
      301 cggtcaccat ccacaattca tcttattccg ggcaaacagt ttcgatcgat tgcgattgtg
      361 aagcatatgt tcgattttac ggcataagca atcgttgtga ggtaatgcaa tcttcaatat
      421 ttaatcgatt gatttttgaa ttttaatagt aatttgaagc tcttattgtt cataagcaat
      481 cgttgttagg acgtgaggta atgcaatctt atttgttgta gtggacgaac gataatgacg
      541 gtaccttcgc tgctatttgt gttactatct gatttacaat atttaattca ttcttcaaag
      601 tcatttatct gttaacaatg taaatgaatc aggtccagtt ctctttgagg tgacctatcg
      661 accaagatat gttctttaat taaaggtagg attaaggatt agttgaagat tatgcctaat
      721 gaacttaaag atgatgctca cactacaaag ttaacaaatg tcaaagtgaa aaatcagcat
      781 ttcatgaaaa atgaattggt tctttattat cttaaaagga agatctgctg ctaacgcttg
      841 atatcattgc tgaagttgat gtttacaagt gggaccctga gaattacctg gccaatctaa
      901 acttaaaact ggtgacagac aatggttctt tttcagccct cgagatagaa agtacccgaa
      961 tggtagatca agtcgagcaa caccgaacgg gtactggaaa gcaaccggta aagacaaaat
     1021 catcaaacgt aatgatgttt gtaatcacga tcatcaagaa tatcaaagca taatgagtat
     1081 tcaaaacatt catgagcctg ttcctaaccc ttcatcaggt acctaaataa aaatttaaaa
     1141 tgggcactac aagtatgttc acaagtggat cacactaggt tgtctcttta cttgtgggcc
     1201 cgaaaattat aaatttcttc tgtcaatgat gtacctttca atttcaaggt ttctctattg
     1261 aaggtgaaac atctaatttt tctatttact ttataagatt gcatggcaag atgagttaat
     1321 atgtggctac tgttccttta gcaaaatgac acaagtgttt gcattctgct tcatttgctt
     1381 tgaatgacat acaagggaag ccaatggtca attcatgatg atgcagagtc atttagtttc
     1441 aagatttatt aagatgtgga gagttattta gtttcgagat ttattatgat gtagtgtttt
     1501 aatagcatat gagaacccgt aacattatac tcaggagttg atatttgcca attatattat
     1561 ttaactcaaa ttgattttgc atgtttgtgt cagattttct ccttaatact taacaagtat
     1621 gtttctttgt gaagctaaaa ctattagtta tattttgtcg tgattcaaca agttcgataa
     1681 acactatgct aatctttagt gttttttaag tgatgtgtag cgcacaggct cataaaatct
     1741 ttgtatgatc tagaggctca tgtt
//
LOCUS       XR_011757020            1724 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839607), ncRNA.
ACCESSION   XR_011757020
VERSION     XR_011757020.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1724
                     /gene="LOC139839607"
                     /note="uncharacterized LOC139839607; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839607"
     ncRNA           1..1724
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839607"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839607"
ORIGIN      
        1 ttagggagta ttatgtgtgg agtcagttgt agtgggttta tttaaagtgc aagtcctcgt
       61 aagttcggtg atcgaatatc accattatgt gggaggaggt tatacatgat attgtgacca
      121 cttggaaatt ctgtaatgga gatgtgactg tgtcactaag aatgctttcg tattgggatt
      181 tgggatgtcg tgaatccttt atggtgataa ttagatgatt ataagttggg tgtcgaggaa
      241 cttacatctt tttcttgttt gggaatcgtg tttgttggaa tcattagtgg attattccac
      301 tgtgaggtcg agtgttaggc gagaaattcc agttctggtt gtctcaaata gaggcactcg
      361 gttaactact tgattttgga gtagatactt tgggggttat gtgaatttga tagtgataga
      421 gtgtcgatat catccctaat ggatggtcaa ggctataggc ccatccggtg ttggtgggca
      481 tattgtaagt catacgataa aaattcagaa gtagataaga tgaatattcg tgattggtaa
      541 aattctggtg caataatagc tttcaagcta gtagctttca ccccggtgta atgggaaagt
      601 gattggtgaa aagaagtacg ttgtattaaa ataaattata atggcgaaag tgtatgcgaa
      661 taggttgaag ggatcgttaa tgttctaaga gagaagaaat ggtgatgttt aaggtttcat
      721 ccatggagta atccgattct ggtggcggga aagtttggtt cacggtttag gggaccattc
      781 aactctgatc agagttgtca gagttgtgta tcaggtaaag tagaccagga acttgcgggg
      841 atccataata cctcttaagt tcccatatag taagtgtctt ccgaatgagt aaatgcgtat
      901 gttgttaaat gataagtata ctcaagtgga ttattcgagg tgtggtttaa gaacttgttt
      961 gttaagagta aatactataa ggggtgtcaa gttagtgttc tagctgtaaa attagcgcct
     1021 caatacctac tttatggtag tggcacggat cacggggacg tgatccaata taagtgtggg
     1081 agagttgtaa catccctgat attatgaggg tcctaggtgt aaggtcattg gaattttggg
     1141 actaaagtga gaaactcata aaaccaaaat acaaattctg gaagctagat taacttctca
     1201 ttcttagata aaaagaaatt aaaagagaga aaaagataga gatagcaggt gacgagcaaa
     1261 ggaaaaaaaa agagagagga gaaagtgagt ttttaatttt cttcaaatcg gagctaggag
     1321 ttggtgattt tgtgcaatta gaggttggtt aagtctaaga gtgtagagac ttgtgaagaa
     1381 atcaccttct cttcatcacc ctcattagta ggtggattac attagcgact cgtggaattc
     1441 ggatattgtg ttgctagaga ttccgaggta cggttgactt ggagctatct agttgctaga
     1501 ctagatattt agacgttgtt tgagctcatg acgggatggc tcgtgactta ttggacttgg
     1561 gttggggata gatagtcccc gtgatcatgc tcctggtatt ggtttgggtt gttgagtctt
     1621 aaaccattcg taaggtaatt tgggtaaaaa ttacactttt gtgttatgta acggatcgtg
     1681 ggtcacccga taaatgatta aacttggtca agcatttcgt tgta
//
LOCUS       XM_071829718            2687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides conserved oligomeric Golgi
            complex subunit 5-like (LOC139839608), mRNA.
ACCESSION   XM_071829718
VERSION     XM_071829718.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2687
                     /gene="LOC139839608"
                     /note="conserved oligomeric Golgi complex subunit 5-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139839608"
     CDS             23..2521
                     /gene="LOC139839608"
                     /codon_start=1
                     /product="conserved oligomeric Golgi complex subunit
                     5-like"
                     /protein_id="XP_071685819.1"
                     /db_xref="GeneID:139839608"
                     /translation="MSSPAVQRSSNQRLPTFKTTINSSATPTTTINPSSLLDSFTSDP
                     IYSKFLTSDFNSTQFSSEALSSGTAAARAEKIQEGIHLLEKQLRSEVLLRHDDLLSQL
                     SSVKDADSSLSSIRSAVSSLQSSVRRVRSEIADPNRQIRSKTVQLSNLHCTIDLLQST
                     VRVIRLSKKLRDVMAEPEVEKLDLSKAAQLHSDIMRLCNEKDLSGIVVIDEEMKLVYE
                     AGNRLRSQGMKVLERGVEGFNQAEVGAGLQVFYNLGELKLTVDGLINKYKSQGVKSVS
                     VALDMKTISSSGGGGGGVFGGPGGIQRSGTPQIGSGAKAKEALWQRMAACMDQLHSII
                     VAIWHLQRVLSKKRDPFTHVLLLDEVMQEGDPILTARVWEAIVKAFANQIKSTFTASS
                     FVKEIFTVGYPKLFSMIDNLLERIERDTDIKGVLPAITIEGRDQMVSAIEVFQTAFLA
                     LCLSRLSDLVNGVFPMSNRGTVPSKEHISRIIARIQEEIESVQLDARLTLLVLREISK
                     VLLLLAQRAEYQISTGPEARQISGPATPAQLKNFTLCQHLQDIHGSISTMTNRLPTIA
                     SDVLSPSLNTIYEVACDSVTSLFQSMLERLESCILQIHNQNFAPVRADAAMDNNSSSY
                     MEELQKHISHFRTEFLSKLLPSSAKVISIGTETICTRLVKAMASRVLIFFIRHASLVR
                     PLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRALRPIIFLETSQLGSSPLL
                     QDLPPSVILHHLYSRGPDELQSPMQRNKLTPVQYSLWLDSQGEEQIWKGIKATLDDYA
                     VQVRSRGDKEFSPVYPLMLSLGSSISDNNAVSRK"
     misc_feature    161..532
                     /gene="LOC139839608"
                     /note="Golgi transport complex subunit 5; Region: COG5;
                     pfam10392"
                     /db_xref="CDD:192566"
ORIGIN      
        1 acaaatctca ccggagtaca aaatgtcatc tccggcagtt caacgttcat ctaatcaacg
       61 tctccctacc ttcaaaacca ccatcaattc atcagcaaca ccaacaacca ccataaatcc
      121 gtcgtcactc ctcgattcct tcacatccga tccaatttac tccaaattcc tcacctccga
      181 tttcaattca acacaattct cctccgaagc actttcttcc ggcactgccg cagctcgcgc
      241 tgaaaagata caagaaggca ttcatctcct cgaaaaacag ctccgttctg aggtattatt
      301 acgtcacgac gatcttctct cacaattatc atccgtaaaa gatgctgatt catcactctc
      361 ttcgattcgc tcagctgttt catctcttca atcgtccgta cgccgtgtca gatccgaaat
      421 cgctgatcct aaccgtcaga tcagatctaa aacggtgcag ctttctaacc tacattgtac
      481 cattgattta cttcaatcaa ctgttcgtgt tatccgtttg tcgaagaagc ttcgagatgt
      541 aatggcggaa cctgaagttg agaagttaga tttatcgaaa gctgctcaat tgcatagtga
      601 cattatgcgt ttgtgtaatg aaaaagattt atctggaatt gttgtgattg atgaggaaat
      661 gaaattagta tatgaagctg gaaacaggtt gagatctcaa gggatgaagg tgttagaaag
      721 aggtgtagaa ggatttaatc aggctgaagt tggtgctggt ttacaggtct tctataattt
      781 aggtgaactg aaattaacgg ttgacggttt aattaataag tataagagtc aaggtgtcaa
      841 gagtgtgagt gtggctttgg atatgaagac gatatcgtca tctggcggcg gtggtggtgg
      901 tgtatttggt ggtcctggag ggatacaaag aagtggcaca ccgcagattg gtagcggggc
      961 aaaggcaaag gaggcgttgt ggcagaggat ggctgcttgt atggatcaac tacattccat
     1021 tattgttgcg atttggcatt tgcagagggt gttatcgaag aaacgggatc cttttacaca
     1081 tgttttgcta cttgatgagg ttatgcagga aggtgaccct atcttaactg ctcgtgtttg
     1141 ggaggcaatt gtaaaagcat ttgcaaacca aataaaatct acttttacag cctcaagttt
     1201 tgttaaagag atatttactg ttggttatcc aaagctcttt tctatgattg ataatcttct
     1261 tgaaagaatt gagcgtgaca cagacattaa aggggtttta cctgctataa caattgaagg
     1321 tagagatcaa atggtgagtg ccattgaagt gtttcagaca gcttttttgg ccctgtgctt
     1381 gagtcgccta tcagatcttg tcaatggtgt attcccaatg tcaaaccgtg gcactgttcc
     1441 ctcaaaagaa catatatcaa gaatcatagc acgcatccaa gaagagattg aatctgttca
     1501 attagatgca aggttgacac ttcttgtttt gcgtgagatc agcaaagttt tgcttttact
     1561 tgctcaacga gccgagtacc agatttcaac tggtcctgaa gcacgccaaa tatcgggtcc
     1621 cgccactccg gctcaactca aaaacttcac gttatgccaa catttacaag acattcacgg
     1681 aagcatatcc accatgacaa accgattacc tacaattgcc tccgatgtct tatccccatc
     1741 actcaacacc atatacgaag tcgcatgtga ttccgtcaca tccttattcc aatccatgct
     1801 cgaacgtctc gagtcatgca tactccaaat tcacaatcaa aatttcgcac ccgtacgtgc
     1861 agatgctgca atggacaaca actcatcatc ttacatggaa gaattacaaa aacacatttc
     1921 tcattttcgt actgagtttc tctcaaaact attaccttca tcggctaaag ttatttcaat
     1981 aggaaccgaa accatttgca ccaggctagt aaaagccatg gcttctcggg ttcttatatt
     2041 ctttatcaga cacgcgtctt tggttagacc gttatctgaa tcaggtaagc tcagaatggc
     2101 acgagacatg gctgagttgg aactagccgt gggtcagaat ttgttcccgg ttgaacaact
     2161 tggtgcacca tatcgagccc ttagagcgtt acggcccatt atttttcttg aaacatcaca
     2221 acttggttca tcacctcttc ttcaagactt gcctccgagt gtgattcttc accatctgta
     2281 ttctcgaggc cctgatgagt tgcagtcgcc aatgcagagg aataaactta cgcctgtaca
     2341 gtattcgtta tggcttgatt ctcaaggaga ggaacagatt tggaaaggta ttaaagcgac
     2401 tcttgatgat tatgcggttc aggtgagatc gagaggagat aaagagttta gccctgttta
     2461 tcctcttatg ttgagtctcg gttcgtctat atcagataat aatgctgttt caaggaaata
     2521 aaaaaacaga agttgagata gatttttctg attatagtgt ttgtttggga catgatattt
     2581 ttgatgttat aacttgttca ccataagcta tgatgaaaat gaaattcaga ttactgtaca
     2641 agcttttcat tgttacgttt tttgtaaaag ttcttaatct tacattt
//
LOCUS       XM_071829719            2084 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839609), mRNA.
ACCESSION   XM_071829719
VERSION     XM_071829719.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2084
                     /gene="LOC139839609"
                     /note="uncharacterized LOC139839609; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839609"
     CDS             1155..1862
                     /gene="LOC139839609"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685820.1"
                     /db_xref="GeneID:139839609"
                     /translation="MKLTLDNSLVHMDYSQQANAPYDDGSLNGIHVCSRSLHPGSTFG
                     VASLMGTFGSRVYVPPFPLARVTSQPSMQNLGSSFNMPTDAHPRRSSTSQSSIATDPI
                     LMGDGQIKGLEKLRREIYNPGIQRVNLYYRNYDDFKAKSQEEQSNNDGQRCSVCLDDF
                     EPREMVTLTPCNHMFHENCIVPWVKSHGQCPTCRFVIIDRNKERVGSQSSDNNELVND
                     PFARDLVSFIRDMEGRG"
     misc_feature    <1548..>1853
                     /gene="LOC139839609"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: HRD1; COG5243"
                     /db_xref="CDD:227568"
     misc_feature    1611..1736
                     /gene="LOC139839609"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; Region: RING-H2_PA-TM-RING;
                     cd16454"
                     /db_xref="CDD:438118"
     polyA_site      2084
                     /gene="LOC139839609"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatgtaataa tagatatact ttcgcgtgtt cctaccagat tcattctccg tttcaaatct
       61 gtttccaaat catggaacgc cctttttcaa aaccctaatt tcatctctaa acatttcaaa
      121 aatcaatcca ctattccaga tccatctttt ctttttacac ctacctactc gccctccaca
      181 tctgatggta aagttggttt tatcttttct gattcatcag acaaatcaat taaaattcca
      241 atcgaaatcg actttcccat tttgaaaccc tttagtgttt gtgggagctg taatgggttg
      301 atttgtttga gtgttttgcc tattggtgcg attatttttt tatggaatcc tgctactagg
      361 gtttgtaaag acttgcctat ttcgcctatt gatcgtcctc ctcgagctgt tccaattaag
      421 gttgtgatag ggtttgggtt tgatgatgtt gtaaaggatt acaaggtgtt aaggattatg
      481 tatgataggt attccgtgga tcaagttgag atatactcgt tgagtacgaa ctcttggagg
      541 gagattaaga ctcgagttcc atttttaatc tcggcatgta gtgttttttt gaatgggaag
      601 ttacattgga atgcttctgg ttttcaggag atgaatggga agaagctgat tgccacattc
      661 gattttcgcg aggaggcgtt taattacata atgcccccta agtttgatct tagtaggcgt
      721 ataaatggaa agatagatag ttgttcggtt gttatgatga aggaatcact agcaatgatc
      781 ggttcagtta ggattgggtc taggaagatg tttgaggtgt gggtaatgaa agaatatggg
      841 gcggtttcat cgtggatgaa atatcggtca tttgaactta aacctaaagt tggtaaatgg
      901 ttggggtgtg gattgaaagg tgagtttatg ttcgagaaag atgataatga actagttgag
      961 aaagatgata atcaactagt tgtgtatgat ttggattcac attcacaaag tgttatcaat
     1021 ttggggaatc aagaggttgc ttattgttct caggtgttta attatgttgc aagtttaatt
     1081 cctatcaatg gtggaaaggt tgcccgaagg actaatttat cggctgtggt tcctgacgct
     1141 ttctttgttc gaagatgaag ttgacacttg acaacagttt ggttcacatg gactattcgc
     1201 agcaagccaa tgcaccatat gacgatggct ccctcaacgg gatccatgtt tgttcaagat
     1261 cacttcatcc tggctctaca tttggtgtcg caagtctaat gggtactttt ggatctagag
     1321 tgtatgttcc tccctttcct ttagctaggg ttacatctca accttcaatg caaaacctag
     1381 gaagcagctt caatatgcct acagatgcgc acccaaggcg aagttctacc agccaatcat
     1441 caatagcaac tgatccaata ctaatgggag atggtcaaat caaagggctc gaaaagctca
     1501 gacgagaaat ttacaaccct ggaatacaac gagtaaacct ttattatagg aattatgatg
     1561 attttaaagc gaaatcacaa gaagaacaaa gtaataatga tggtcagaga tgttcggttt
     1621 gtttagatga cttcgaacca agagagatgg tgactcttac accatgcaat catatgtttc
     1681 atgagaactg tattgtaccg tgggtcaaaa gccatgggca atgtccaact tgccggtttg
     1741 tgattattga ccggaataaa gaacgcgtag gaagtcaaag cagtgataat aatgagttag
     1801 tcaatgaccc gtttgcacga gacttggttt cttttataag agacatggaa ggtcggggtt
     1861 gatttggttc ctactactgg gccccgttcg gaattggaat tgaatttaga cacgacgctt
     1921 gtctaaattc aattccaatt ctgtcggtat cctattggat tccgtgagcc aaacggggca
     1981 tatttttttc attttctttt gtctttcaca ataaatattg tatgtattat tagttatcac
     2041 agtgtactat aatgatcaaa ataaaataga tgcaagttct gcaa
//
LOCUS       XM_071829720            2242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent zinc
            metalloprotease FTSH 2, chloroplastic-like (LOC139839610), mRNA.
ACCESSION   XM_071829720
VERSION     XM_071829720.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2242
                     /gene="LOC139839610"
                     /note="ATP-dependent zinc metalloprotease FTSH 2,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 49 Proteins"
                     /db_xref="GeneID:139839610"
     CDS             31..2088
                     /gene="LOC139839610"
                     /codon_start=1
                     /product="ATP-dependent zinc metalloprotease FTSH 2,
                     chloroplastic-like"
                     /protein_id="XP_071685821.1"
                     /db_xref="GeneID:139839610"
                     /translation="MAASSACIVGNGLSTKRDVRKILSPSLPSLYKVPKTIVRASLDK
                     NNVEGRRGFLKLLLGNAGLAAPALLSSGKAYAADDEQGVSNSRMSYSRFLEYLDKDRV
                     NKVDLFENGTIAIVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQED
                     SGSFLFNLIGNLAFPLILIGGLFLLSRRSGGGMGGPGGPGNPLAFGQSKAKFQMEPNT
                     GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI
                     AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTG
                     IGGGNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV
                     PDVRGRTEILKVHAGNKKFDKDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRAKTA
                     ISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLVP
                     RGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQI
                     TGLAKQMVVTFGMSEIGPWSLMDGSGQSQDVIMRMMARNSMSEKLAEDIDTAIKKLSD
                     SAYEIALMHIRNNREAMDKIVEVLIEKETMSGDEFRAILSEFVEIPVENRVVPASPSP
                     VSV"
     misc_feature    271..2049
                     /gene="LOC139839610"
                     /note="cell division protein; Validated; Region: ftsH;
                     CHL00176"
                     /db_xref="CDD:214386"
     polyA_site      2242
                     /gene="LOC139839610"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttagtcatat ttgtttggca gtaatctata atggctgcat catccgcctg tattgttgga
       61 aacggtctat ccactaaaag agacgtgcgc aaaatactat cccctagcct tccttccctt
      121 tacaaagttc caaaaaccat tgtgagagca tctttggata agaacaacgt tgaaggaaga
      181 cgagggtttc taaaattgct actcggtaat gcgggactcg cagctcccgc gttgctaagt
      241 agcggtaaag cgtatgccgc tgatgacgaa caaggcgttt ctaactcaag aatgtcgtat
      301 tctcgatttc tagagtattt ggacaaagat agagttaata aagttgattt atttgagaat
      361 ggaacgatag caatcgttga ggcggtttct cccgaattgg gaaaccgagt tcagcgcgtt
      421 cgggtccaac tcccgggtct cagtcaagaa cttttacaaa agtttaggga gaaaaatatt
      481 gactttgcag cacataatgc tcaagaggat tcgggttcct ttctgttcaa tttaattgga
      541 aatcttgctt ttccgttgat cttgattggt ggtttgttcc ttttgtcgag acgttctggt
      601 ggtggtatgg gtgggcccgg tgggcccggg aacccacttg cgtttggtca atcgaaagct
      661 aagtttcaga tggaaccaaa cactggtgtc acgtttgatg acgtggcggg tgttgacgaa
      721 gcaaagcagg atttcatgga agttgtggag tttttaaaga aacctgagag gtttactgct
      781 gttggtgctc ggattccaaa gggtgttctt ctagtgggcc cacccggaac aggaaaaaca
      841 ctattagcta aggctattgc tggagaagcg ggtgtcccgt ttttttcaat ttcgggttca
      901 gagtttgttg agatgtttgt tggtgttggt gcttcgagag ttcgcgatct tttcaaaaag
      961 gcgaaagaga acgcaccgtg tattgtgttt gtcgatgaaa ttgacgcggt tgggagacaa
     1021 cgtgggaccg gtattggagg gggaaacgat gaaagagaac agacacttaa ccaactttta
     1081 actgaaatgg acgggtttga aggtaatacg ggtattattg ttgttgcagc tactaatcgt
     1141 gcagatattc ttgactctgc attattgaga cctggacgat tcgacagaca ggtatcggtt
     1201 gatgttccag atgttcgagg aagaacagag atcttgaagg ttcatgctgg gaacaagaag
     1261 tttgacaaag atgtctctct tgaggtgatc gccatgagaa cacctggatt tagtggagct
     1321 gatcttgcaa atcttttaaa cgaagcagct atattagctg gtcgccgtgc aaaaaccgca
     1381 atatcatcca aagaaatcga cgactccatt gatagaatcg ttgccggaat ggaaggaact
     1441 gttatgacag atgggaaaag taaaagtctt gtagcctatc atgaggttgg ccacgccatt
     1501 tgtggaactc taacaccggg gcatgatgcg gtccaaaagg tgaccctggt cccacgtggt
     1561 caagcaagag ggttgacctg gtttatacca tctgatgacc ctacattgat ctctaaacaa
     1621 caactgtttg cacgaatcgt tggtggactt ggtggacgag ctgctgaaga aatcatcttt
     1681 ggtgagccag aggtgactac tggtgcagct ggtgatctgc aacagatcac tggtttagcc
     1741 aaacagatgg ttgtaacatt tggcatgtct gaaattggcc catggtcact tatggacgga
     1801 tctggtcaaa gtcaagatgt tataatgaga atgatggcta gaaactccat gtccgaaaag
     1861 ctagctgaag acattgatac agcaattaaa aagctttcag acagtgcata cgaaattgca
     1921 ttgatgcata tcagaaacaa tcgcgaagct atggacaaaa tagtggaggt tcttattgag
     1981 aaagaaacaa tgagtgggga tgagtttcgg gcaatccttt ctgaatttgt tgaaattcca
     2041 gttgaaaacc gggtcgttcc tgcttctcca agcccagtaa gtgtatgaat gataggatac
     2101 taaaattaaa gtacattgta ctgatatgta atataattct tgtttacagt ttttgattgg
     2161 ttgttatctg gtagtaaatt gtactccgta atgtttaact acaagtggtt catacatata
     2221 aaagatagct gctttttcct aa
//
LOCUS       XM_071829722            3281 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
            (LOC139839611), mRNA.
ACCESSION   XM_071829722
VERSION     XM_071829722.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3281
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3281
                     /gene="LOC139839611"
                     /note="probable alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 7; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 68 Proteins"
                     /db_xref="GeneID:139839611"
     CDS             232..2796
                     /gene="LOC139839611"
                     /codon_start=1
                     /product="probable alpha,alpha-trehalose-phosphate
                     synthase [UDP-forming] 7"
                     /protein_id="XP_071685823.1"
                     /db_xref="GeneID:139839611"
                     /translation="MQSRSYTNLLELASGNFPVMGREREKRKMPRVMTVPGSITELDD
                     DQASSVASDNPSSLAMDRMIIVANQLPLKAKRRADNKGWSFTWDDESLYLRLKDGFPD
                     DMEVLYVGSLNVDVDPIEQDDVAQVLLDRFGCVPTFLPPSLMERYYDGFCKKQLWPLF
                     HYMLPFSADHGGRFDRSMWESYVAANKLFSQKVIEVINPEDDFVWIHDYHLMVLPTFL
                     RRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCS
                     RMFGLEYQSKRGYIGLDYYGRTVGIKIMPVGIHMGQIESVMKLADKEWRVGELKQQFE
                     GKTVFLGVDDMDVFKGINLKLLAMEQMLKVHPSWQGRAVLIQIANPARGRGGIDLEEI
                     QVEIQESCKRINDQFGKPGYQPIVYIDTPLAINERVAYYSIAECVVVTAVRDGMNLTP
                     YEYIVCREGISGSDSNGPKKSMLVVSEFIGCSPSLSGAIRVNPWNVEATAEAMNEAIS
                     MSEPEKQLRHEKHYRYVSTHNVGYWSRSFLQDMERTCADHFRKRCWGIGLGFGFRVVS
                     LDPNFRKLSIDDIVSAYIKAKNRAILLDYDGTVMPQNSIIKTPSRAVINIMNKLSGDE
                     NNKVFIVSGRGRESLSKAFSPCKKLGIAAEHGYFMRWSQDVEWETCGQNSDFGWMQMA
                     EPVMKLYTEATDGSSIETKESALVWQYRDADPGFGFAQAKEMLDHLESVLANEPVAVK
                     SGQYIVEVKPQEASKGLVAEKIFTSMAEKGRQADFVLCIGDDRSDEDMFEIIGNAISK
                     NMISVNTNVFACTVGQKPSKAKYYLDDTSEVIFMLENLAEATDTPVTSEDEDDEDE"
     misc_feature    232..2766
                     /gene="LOC139839611"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming]; Region: PLN02205"
                     /db_xref="CDD:177855"
     polyA_site      3281
                     /gene="LOC139839611"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actacacttt attcatcaac aaaccctaaa tgtccattat ctttcaaaac acacacacaa
       61 acacacaaga tattaaaatc tttcattaga ttttgaagat cgagctttat agagtgcaaa
      121 gatttacaat ttgccaaagg tgttcactga aattggctca tttgttaggg tttttaagag
      181 ttgtataggt tggtatattt agggtttttg tttgagacgt aataaggaaa gatgcagtcg
      241 agatcgtata caaatctgtt ggagttagct tcaggaaatt tccctgtaat ggggcgagaa
      301 cgggagaaac gaaagatgcc gagagtaatg actgttcctg gaagtattac agagcttgat
      361 gatgatcaag ctagtagtgt tgcatctgat aatccttcat cacttgctat ggatcgaatg
      421 atcattgtgg cgaatcaatt gccattgaaa gctaaaagga gagctgataa taaagggtgg
      481 agtttcactt gggatgatga atcgttgtat ttgcggctca aagatggttt tccagatgat
      541 atggaggttt tatatgttgg ttcattgaat gtggacgttg atccgattga acaagatgat
      601 gttgctcaag ttttattgga tagattcggg tgtgtcccga cttttcttcc acctagtttg
      661 atggagagat attatgatgg tttctgtaaa aagcaattat ggcctctttt tcattacatg
      721 ttaccgtttt ctgctgatca tggaggaaga tttgaccggt caatgtggga gtcttatgtt
      781 gcagcaaata agctattttc ccagaaagtt attgaagtga taaatccaga agatgatttt
      841 gtttggattc atgattatca tttaatggtc ttgcctacct ttttaagaag gcgttttaat
      901 cgtttgagaa tggggttttt tcttcacagt ccattcccat cttctgagat ttacaggaca
      961 cttcctgtta gagaggaaat cctcaaagct ttacttaatt ccgacctaat cggtttccac
     1021 acatttgatt atgcacgaca ttttctttct tgttgtagcc gaatgtttgg tttagaatac
     1081 caatcgaaaa ggggttacat cgggttagat tattatggaa gaactgttgg aatcaagata
     1141 atgcccgtcg gcatccatat gggtcaaatt gagtcagtga tgaaacttgc tgacaaagag
     1201 tggagagttg gtgaacttaa acaacagttt gaagggaaaa ctgtgtttct tggagttgat
     1261 gacatggatg tttttaaagg tatcaattta aagcttttag caatggaaca aatgcttaaa
     1321 gttcatccat catggcaagg tagggcggtt cttattcaga ttgcaaatcc cgctaggggt
     1381 agaggcggga ttgatttgga agaaatacaa gttgaaattc aagaaagttg taaacgtata
     1441 aatgatcaat ttggaaagcc tgggtatcag cctatcgttt atatagatac ccctctggct
     1501 atcaatgaac gggttgctta ttacagtata gcagagtgtg ttgttgtgac agctgtacgg
     1561 gatggtatga atctaactcc ttatgaatat atcgtgtgtc gtgagggaat atctgggtca
     1621 gattcaaatg ggcctaaaaa gagcatgctg gttgtatcag agtttattgg gtgttctcct
     1681 tctttaagtg gtgcaattcg ggtcaacccg tggaatgttg aggcaactgc tgaggctatg
     1741 aacgaggcta tatctatgag tgaacccgag aaacaattga ggcatgagaa gcattatcgt
     1801 tatgttagta ctcataatgt tggttattgg tctagaagtt tcttgcaaga tatggagaga
     1861 acatgtgcag atcatttcag gaaaagatgt tgggggattg gtttgggatt tgggtttagg
     1921 gttgtgtctt tagatcctaa ttttcggaag ctttctattg acgatattgt gtcggcttac
     1981 ataaaggcta aaaacagggc aatattgttg gattatgatg ggacagtgat gccacaaaat
     2041 tcgattatca agacaccaag tagagcagtt attaacataa tgaataagct ttcaggagat
     2101 gaaaataata aagtgtttat tgttagtgga cgaggtagag agagcttaag caaggcgttt
     2161 tctccttgca agaaacttgg aattgcagcc gaacatggct actttatgag gtggtcacaa
     2221 gatgtagaat gggaaacgtg tggtcaaaat agtgattttg gatggatgca aatggctgag
     2281 ccggtgatga aactgtatac agaggctaca gatggttctt ccattgaaac taaggagagt
     2341 gcattagtgt ggcagtatcg ggatgcggac ccggggtttg gatttgctca ggcgaaggag
     2401 atgttagatc atcttgagag cgtcttggca aacgaacctg ttgcagtcaa gagtggtcaa
     2461 tatattgttg aagtcaagcc tcaggaagca agtaaaggtc tggtagcaga gaagatcttc
     2521 acatcgatgg ctgaaaaagg gaggcaggct gattttgtcc tttgtatcgg tgacgacaga
     2581 tctgacgaag atatgtttga gattattggc aatgctatat cgaaaaacat gatttcagtc
     2641 aatactaacg tgtttgcttg taccgttgga cagaagccta gcaaagccaa atattacctg
     2701 gatgacacga gtgaagtcat ctttatgctt gaaaatttag ctgaagccac cgacacccct
     2761 gttacatctg aagatgaaga tgatgaagat gaataggtcc cccattcaac tctttcataa
     2821 tttttctttc tcaagtgaac tctgtcaaaa atatgtttct ttgctgctgt taaaagcatg
     2881 tgattcttag gtcaggtttt aggttttaaa ggtattgact ttttgaccag aaggtcacgg
     2941 gttcgagtct accggttact actcatttta accatctttg cttttggtgt ccattcttgt
     3001 ctacttcata aagatgaaaa tattagggtt gaagggggtg gtggctgact tatggttttt
     3061 tgcagcatga aaataagttg gcgttgtgcc gaggtgtagt aaaatggttg agatgaggag
     3121 tctggcatga ccttttcatc tttgtttgat ctgtttttgc ttttcttatg ttttcattaa
     3181 ttactatgcc tgtttggaca tactctgtat attcatttgt ttggaaaaag ggattagttt
     3241 tgtacattgt gtacccttga atacatattt cattttctta a
//
LOCUS       XM_071829723            1004 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ras-related protein Rab11D
            (LOC139839612), mRNA.
ACCESSION   XM_071829723
VERSION     XM_071829723.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1004
                     /gene="LOC139839612"
                     /note="ras-related protein Rab11D; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 159
                     Proteins"
                     /db_xref="GeneID:139839612"
     CDS             27..680
                     /gene="LOC139839612"
                     /codon_start=1
                     /product="ras-related protein Rab11D"
                     /protein_id="XP_071685824.1"
                     /db_xref="GeneID:139839612"
                     /translation="MSGYRGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLETKS
                     TIGVEFATRSVHVEGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFE
                     NIKRWLKELRDHTDPNIVVMLIGNKSDLRHLLAVSTEDGKTFAEAESLYFMETSALEA
                     TNVENAFTEVITQIYKIVSKKAVEVGDEGASSLPSKGATIDVKDESSGPTRFGCCSN"
     misc_feature    57..551
                     /gene="LOC139839612"
                     /note="Rab GTPase family 11 (Rab11)-like includes Rab11a,
                     Rab11b, and Rab25; Region: Rab11_like; cd01868"
                     /db_xref="CDD:206660"
     misc_feature    57..71
                     /gene="LOC139839612"
                     /note="Rab subfamily motif 1 (RabSF1); other site"
                     /db_xref="CDD:206660"
     misc_feature    84..107
                     /gene="LOC139839612"
                     /note="G1 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(90..110,141..143,150..152,159..161,237..239,
                     402..407,411..413,492..500)
                     /gene="LOC139839612"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206660"
     misc_feature    order(108..143,147..158)
                     /gene="LOC139839612"
                     /note="Rab subfamily motif 2 (RabSF2); other site"
                     /db_xref="CDD:206660"
     misc_feature    order(138..140,153..179)
                     /gene="LOC139839612"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(153..155,165..188,207..209,213..215)
                     /gene="LOC139839612"
                     /note="putative GEF interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206660"
     misc_feature    159..161
                     /gene="LOC139839612"
                     /note="G2 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(162..164,168..176,219..221,225..227,246..251,
                     258..260,270..272,276..287,546..548)
                     /gene="LOC139839612"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     misc_feature    order(162..167,171..173,225..230,249..251,255..257,
                     261..269)
                     /gene="LOC139839612"
                     /note="putative GDI interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206660"
     misc_feature    162..176
                     /gene="LOC139839612"
                     /note="Rab family motif 1 (RabF1); other site"
                     /db_xref="CDD:206660"
     misc_feature    213..227
                     /gene="LOC139839612"
                     /note="Rab family motif 2 (RabF2); other site"
                     /db_xref="CDD:206660"
     misc_feature    228..239
                     /gene="LOC139839612"
                     /note="G3 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(237..239,243..275)
                     /gene="LOC139839612"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206660"
     misc_feature    246..263
                     /gene="LOC139839612"
                     /note="Rab family motif 3 (RabF3); other site"
                     /db_xref="CDD:206660"
     misc_feature    270..284
                     /gene="LOC139839612"
                     /note="Rab family motif 4 (RabF4); other site"
                     /db_xref="CDD:206660"
     misc_feature    297..314
                     /gene="LOC139839612"
                     /note="Rab family motif 5 (RabF5); other site"
                     /db_xref="CDD:206660"
     misc_feature    381..395
                     /gene="LOC139839612"
                     /note="Rab subfamily motif 3 (RabSF3); other site"
                     /db_xref="CDD:206660"
     misc_feature    402..413
                     /gene="LOC139839612"
                     /note="G4 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    492..500
                     /gene="LOC139839612"
                     /note="G5 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    540..551
                     /gene="LOC139839612"
                     /note="Rab subfamily motif 4 (RabSF4); other site"
                     /db_xref="CDD:206660"
     polyA_site      1004
                     /gene="LOC139839612"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaaaataaa aaaaggggcc gaggagatgt ctggatacag aggtgatgat gagtacgatt
       61 acttgttcaa attagtttta atcggcgatt caggtgtcgg taaatcaaat cttctctcca
      121 gattcactag gaatgaattc aatttagaaa caaaatccac aattggtgtt gagtttgcta
      181 ccaggagtgt tcatgttgaa ggcaaagtca tcaaagctca gatttgggat actgctggtc
      241 aagaaaggta tcgtgcaatt acaagtgctt actacagagg agccgttggt gctttactgg
      301 tatacgatgt tactcgtcat gctacttttg aaaacatcaa gaggtggtta aaggaattaa
      361 gagaccacac tgatccaaac attgtggtca tgctaatcgg caacaaatcc gaccttcgtc
      421 acctacttgc tgtttcaacc gaagatggta aaacgtttgc tgaagctgaa tccctgtatt
      481 tcatggagac ttctgcattg gaagcaacta acgttgaaaa tgcttttact gaagtgatta
      541 cacaaattta caagattgtg agtaagaaag cggttgaagt tggtgatgag ggtgcgtcgt
      601 cgcttcctag taaaggagcc actattgatg ttaaggatga atcttcgggt cccactagat
      661 ttggttgttg ctctaattag gtggtggttt gtgttagtta gaatatactc cgtacatttt
      721 tataattctt gttatgagaa tgagaatgca tcaaaggggt ggtgttacgc aagtgtttaa
      781 aaaaggaatg ttgagcagta aggtatgtgg tatatttgaa tgaattggta tgattttaga
      841 atgtgagatg tattacactt ttggttattt atctcgttct tattttttgt taatgcatga
      901 tgcattggct actctaaagc gtgtaatatg catccagcag accagcactc tattgtttgg
      961 cttcctcgat aaccttatgc aatgcgatta actaatattc tata
//
LOCUS       XM_071829724            3756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839613), transcript variant X1, mRNA.
ACCESSION   XM_071829724
VERSION     XM_071829724.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3756
                     /gene="LOC139839613"
                     /note="uncharacterized LOC139839613; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839613"
     CDS             369..3362
                     /gene="LOC139839613"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685825.1"
                     /db_xref="GeneID:139839613"
                     /translation="MAGKATFESTSNSWSEPGFLGGFMNGKRGVRSAAAGSNLDRSVN
                     VREGSESRKFGLGFDMVHDGSGKASEDIQSLSECVSLEPIVIHDQISRVDESRRVLGL
                     SAGNTTGDNSFGPGSASHVKPLPPVAVVKDLKRFRSSVADTCVKARVRANEIDERLRN
                     LDRYYEARNSKKQHRSELVSNDRPSVLSFKPAIQTHNVNQRVDRPKNILLNKRVRTSV
                     AESRAECRNNGVQMQPAGTTNDGNVPEDNDGESDLFEKIRRLAPCGDGWDKKGKRKRS
                     SGTLFMRPNDSGGAPKRVAAQNKIVNEGGSQPRDADVYRLSNRDESQSNRKRPMPSVS
                     SSPPMAQWVGQRPQKMARARRPSLVSAVSNQDPNQISFENPSLSDVGADLVPNGTNGP
                     PISRNATSGPQKLIVKLENVQSSSRLSENEESIGGETRSMGRKLGNSEMSPVSKNKPP
                     LNAVTPKPFQSSKNGYKKNGSKPGRRLKKLSDRKGFPDLSPSQNNKSPDCPGASDDDR
                     EELLAAANHARIARHLACSSLLWKKMEPVFASCSSEVKSLLFQQMGPPHENSLSDQPS
                     SIERKTHIQHPETESFSESNVSVPLYQRVLSALIIEDDVPESEDATYDTYGFNEYESF
                     PSNVNTNSFKTPVNNNLCEDANIEVEILNGVSNGFLNKQQTSEKEGSLDAKLLLELQS
                     IGLYLDELPGLNEKEDETLQREVDKLNSRLHQQEVKKKAYFEKLRKGVESDSGIRDLE
                     TLAMDRLVELAYKKLLLATKRSSRSMINKVPKQSALAFGRRTLARCRKFETSGKSCFS
                     EPLYQDILSAPIENEPDPNLLSDEGFTTSNKGKKKEFFLDDIGTRTPSYVGVSGGTKG
                     KRSERDPTKSRKPKPRQKSGQIQVSGTGSVNKNSRSLHPTGPTWPSSNRPNNESSNRS
                     THPTGPTWPSSKGASQLDTRSNEGTGHTNPSLDDLDPLDDLGVGGDLGGPADFDSFLN
                     IDDHDLDEDFAGGLDIPMDDLTELF"
ORIGIN      
        1 ctctttttat cggacagacg acgacttctg aaaaccatat acaaacgtgt atacaaacag
       61 cgataccgcc agtaacaacg acgaccaccg ccaccggcca ccggaatttg acaactattt
      121 accgacgtaa ctgcaccaca gctggaactg tacggacacc tgtaatttca agccacgatt
      181 ctgcagtgga acgctgactt ataggacgga tcatgatggt gttcgatttt gatttgttgt
      241 taactttgct cgcataagtt aattgtttaa tttcaatttg ataggtatat aggtaatgat
      301 tcggagtaat tttgtatact tttttgatct atgagtggga tgttagagat ttaggggtgt
      361 ttttgattat ggctggaaaa gcaaccttcg aatcgacttc aaatagttgg tccgagccag
      421 ggtttttggg aggttttatg aatgggaaga ggggggttcg atcagcggca gcggggagta
      481 atctggatcg gtctgtaaac gttagagagg gttctgaaag cagaaagttt ggtttaggat
      541 ttgatatggt acatgatgga agtggtaaag catcggagga tattcagagt ttatcagagt
      601 gtgtttcgtt ggagccaatt gtgattcacg accagatttc acgggttgat gagtcaagga
      661 gggttttagg gctttctgct ggaaacacaa ccggagataa ctcattcggc cctggttctg
      721 catctcatgt taagccatta cctccagtag cggttgtgaa ggatttaaag cggtttagat
      781 cgagtgttgc ggatacgtgc gtcaaagcta gggttcgagc aaatgaaata gatgaacgct
      841 tgcgcaattt ggatagatat tatgaagcta gaaactccaa gaaacaacac cggagtgaat
      901 tagtgagtaa tgacagacca agtgttttaa gttttaaacc ggctatccaa acacacaatg
      961 taaatcaaag agtagatcgg cctaagaata ttcttctcaa caagcgtgtt cgaacttcag
     1021 ttgctgaatc tcgggccgaa tgccggaata atggcgtaca gatgcagcct gcggggacca
     1081 caaacgacgg aaatgtaccc gaggataatg atggtgagtc tgatctattt gaaaagattc
     1141 gtaggctggc tccatgtggg gacgggtggg ataagaaagg taaaagaaaa cgttcatcag
     1201 gcacactttt tatgagacct aatgatagtg gtggagcccc taaacgagtt gctgcacaaa
     1261 acaagattgt taatgaaggt ggttcacaac cacgtgatgc tgatgtctac aggttaagta
     1321 atcgcgatga atctcaaagt aatcgcaaac gtccgatgcc gtcagtttca tcttctcctc
     1381 caatggctca atgggttggt cagagaccac agaaaatggc tcgagcaagg agaccaagct
     1441 tggtgtctgc tgtctcaaat caagatccga accagatatc ttttgagaac ccttcacttt
     1501 ctgacgttgg tgctgatttg gtccctaatg ggactaatgg tcctcctatt tctagaaatg
     1561 caactagtgg gccccagaaa ttgatagtta agcttgagaa tgtccaatct tcatcgcgat
     1621 tatccgaaaa tgaagagtct attggtggtg aaacgcggtc gatgggaaga aaattgggta
     1681 acagtgaaat gagtccggtt tcaaagaaca aaccgccctt gaatgctgtg acaccaaagc
     1741 catttcaaag tagtaagaac gggtataaga agaatggaag taaacctggc cgtcgattga
     1801 aaaagctttc agaccgtaag ggctttccag atctctctcc ttctcaaaac aataaatctc
     1861 ctgattgtcc aggagcatct gatgatgatc gggaagagct gttagcagct gcaaatcatg
     1921 ctcgtatagc acgtcatcta gcatgttcaa gtctattgtg gaagaaaatg gaaccggtct
     1981 ttgcctcttg tagttccgaa gttaaatcat tattatttca acagatgggg cccccacatg
     2041 aaaattcttt atccgatcaa ccttcttcta tagaaagaaa aacacacata caacatccgg
     2101 aaactgaatc attctccgaa tccaatgtgt ccgtaccatt ataccaaaga gtactatcag
     2161 cacttattat agaagatgat gttcctgaat cagaagatgc aacatacgat acatatggct
     2221 tcaatgaata tgaatctttt cctagcaacg taaatacaaa ttcttttaaa acccctgtca
     2281 acaacaattt atgcgaagat gcgaacatag aagttgagat attaaacggg gtttcaaatg
     2341 gcttcttaaa taagcagcaa acgtcagaaa aagaaggttc tttagatgcg aaacttctac
     2401 ttgagcttca gagtataggc ctatatctgg atgaactgcc tgggttgaat gaaaaggaag
     2461 atgaaacact gcagcgtgaa gtcgataagc tgaattcgag acttcatcaa caggaggtta
     2521 aaaagaaggc gtactttgag aaattacgta aaggtgttga aagcgactct ggaatccgag
     2581 accttgaaac acttgccatg gatagattgg ttgagttggc atataaaaaa cttttgctgg
     2641 ctactaaacg aagctctaga tccatgatta ataaggtgcc aaaacaaagt gcattagctt
     2701 ttggacgaag aactcttgcg cgatgtcgca aattcgaaac ttcgggaaaa agttgcttta
     2761 gtgagcctct gtatcaagat attctttctg caccgattga aaacgagcca gatccgaacc
     2821 ttttgtcaga tgaaggtttc acgacatcaa acaaaggcaa aaagaaagaa ttttttcttg
     2881 acgatattgg cactcgaacg ccatcttatg ttggtgtctc cggaggaact aagggcaaaa
     2941 gaagtgagcg ggatcctacc aaatctagaa aacctaaacc aagacagaag tcgggtcaga
     3001 ttcaagtatc cggtaccgga tcagtcaaca aaaattcgag atccttacat cctacaggac
     3061 ctacatggcc gtcgtcaaac agacccaaca acgaatcgtc caatagatcc acacatccta
     3121 cgggacccac atggccatca tcaaaaggag ccagtcaatt ggatactagg agtaatgaag
     3181 ggactggcca tacaaaccct tcgcttgatg atctagaccc gttagacgat ttaggtgtcg
     3241 ggggtgacct tggtgggcct gctgatttcg attctttttt gaacattgat gatcatgatt
     3301 tggatgaaga ttttgcagga gggctggaca tacctatgga cgatcttaca gaattgttct
     3361 gattttggtc accgtttcgt ttcaagtgta cattaatgtc gataatctgg cagtaaggaa
     3421 agaactcaga ggcagcttgc attgtaagtt ataacagcta tatatagaaa ttggtaataa
     3481 ggaagtttta tcttatacaa agggagggag agagaggtac atggttcatt gtagagaaat
     3541 ctaaattata ctagacaagt ggttttgtag gcgattcact cgccgtagaa ggaaaatatt
     3601 ggtttggaat ttagtgggat gttatagcat catttggatt tcgatttcga ttaattagat
     3661 gtctcttgaa agttgaactt tagagatttt ctctatagat gtggtggcat tgtttgaata
     3721 tcttgcgagt tcttttactc cataatgaaa ccttat
//
LOCUS       XM_071829725            3776 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839613), transcript variant X2, mRNA.
ACCESSION   XM_071829725
VERSION     XM_071829725.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3776
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3776
                     /gene="LOC139839613"
                     /note="uncharacterized LOC139839613; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839613"
     CDS             389..3382
                     /gene="LOC139839613"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685826.1"
                     /db_xref="GeneID:139839613"
                     /translation="MAGKATFESTSNSWSEPGFLGGFMNGKRGVRSAAAGSNLDRSVN
                     VREGSESRKFGLGFDMVHDGSGKASEDIQSLSECVSLEPIVIHDQISRVDESRRVLGL
                     SAGNTTGDNSFGPGSASHVKPLPPVAVVKDLKRFRSSVADTCVKARVRANEIDERLRN
                     LDRYYEARNSKKQHRSELVSNDRPSVLSFKPAIQTHNVNQRVDRPKNILLNKRVRTSV
                     AESRAECRNNGVQMQPAGTTNDGNVPEDNDGESDLFEKIRRLAPCGDGWDKKGKRKRS
                     SGTLFMRPNDSGGAPKRVAAQNKIVNEGGSQPRDADVYRLSNRDESQSNRKRPMPSVS
                     SSPPMAQWVGQRPQKMARARRPSLVSAVSNQDPNQISFENPSLSDVGADLVPNGTNGP
                     PISRNATSGPQKLIVKLENVQSSSRLSENEESIGGETRSMGRKLGNSEMSPVSKNKPP
                     LNAVTPKPFQSSKNGYKKNGSKPGRRLKKLSDRKGFPDLSPSQNNKSPDCPGASDDDR
                     EELLAAANHARIARHLACSSLLWKKMEPVFASCSSEVKSLLFQQMGPPHENSLSDQPS
                     SIERKTHIQHPETESFSESNVSVPLYQRVLSALIIEDDVPESEDATYDTYGFNEYESF
                     PSNVNTNSFKTPVNNNLCEDANIEVEILNGVSNGFLNKQQTSEKEGSLDAKLLLELQS
                     IGLYLDELPGLNEKEDETLQREVDKLNSRLHQQEVKKKAYFEKLRKGVESDSGIRDLE
                     TLAMDRLVELAYKKLLLATKRSSRSMINKVPKQSALAFGRRTLARCRKFETSGKSCFS
                     EPLYQDILSAPIENEPDPNLLSDEGFTTSNKGKKKEFFLDDIGTRTPSYVGVSGGTKG
                     KRSERDPTKSRKPKPRQKSGQIQVSGTGSVNKNSRSLHPTGPTWPSSNRPNNESSNRS
                     THPTGPTWPSSKGASQLDTRSNEGTGHTNPSLDDLDPLDDLGVGGDLGGPADFDSFLN
                     IDDHDLDEDFAGGLDIPMDDLTELF"
ORIGIN      
        1 cagccctctt tttatcggac agacgacgac ttctgaaaac catatacaaa cgtgtataca
       61 aacagcgata ccgccagtaa caacgacgac caccgccacc ggccaccgga atttgacaac
      121 tatttaccga cgtaactgca ccacagctgc tagttaattt ataggaactg tacggacacc
      181 tgtaatttca agccacgatt ctgcagtgga acgctgactt ataggacgga tcatgatggt
      241 gttcgatttt gatttgttgt taactttgct cgcataagtt aattgtttaa tttcaatttg
      301 ataggtatat aggtaatgat tcggagtaat tttgtatact tttttgatct atgagtggga
      361 tgttagagat ttaggggtgt ttttgattat ggctggaaaa gcaaccttcg aatcgacttc
      421 aaatagttgg tccgagccag ggtttttggg aggttttatg aatgggaaga ggggggttcg
      481 atcagcggca gcggggagta atctggatcg gtctgtaaac gttagagagg gttctgaaag
      541 cagaaagttt ggtttaggat ttgatatggt acatgatgga agtggtaaag catcggagga
      601 tattcagagt ttatcagagt gtgtttcgtt ggagccaatt gtgattcacg accagatttc
      661 acgggttgat gagtcaagga gggttttagg gctttctgct ggaaacacaa ccggagataa
      721 ctcattcggc cctggttctg catctcatgt taagccatta cctccagtag cggttgtgaa
      781 ggatttaaag cggtttagat cgagtgttgc ggatacgtgc gtcaaagcta gggttcgagc
      841 aaatgaaata gatgaacgct tgcgcaattt ggatagatat tatgaagcta gaaactccaa
      901 gaaacaacac cggagtgaat tagtgagtaa tgacagacca agtgttttaa gttttaaacc
      961 ggctatccaa acacacaatg taaatcaaag agtagatcgg cctaagaata ttcttctcaa
     1021 caagcgtgtt cgaacttcag ttgctgaatc tcgggccgaa tgccggaata atggcgtaca
     1081 gatgcagcct gcggggacca caaacgacgg aaatgtaccc gaggataatg atggtgagtc
     1141 tgatctattt gaaaagattc gtaggctggc tccatgtggg gacgggtggg ataagaaagg
     1201 taaaagaaaa cgttcatcag gcacactttt tatgagacct aatgatagtg gtggagcccc
     1261 taaacgagtt gctgcacaaa acaagattgt taatgaaggt ggttcacaac cacgtgatgc
     1321 tgatgtctac aggttaagta atcgcgatga atctcaaagt aatcgcaaac gtccgatgcc
     1381 gtcagtttca tcttctcctc caatggctca atgggttggt cagagaccac agaaaatggc
     1441 tcgagcaagg agaccaagct tggtgtctgc tgtctcaaat caagatccga accagatatc
     1501 ttttgagaac ccttcacttt ctgacgttgg tgctgatttg gtccctaatg ggactaatgg
     1561 tcctcctatt tctagaaatg caactagtgg gccccagaaa ttgatagtta agcttgagaa
     1621 tgtccaatct tcatcgcgat tatccgaaaa tgaagagtct attggtggtg aaacgcggtc
     1681 gatgggaaga aaattgggta acagtgaaat gagtccggtt tcaaagaaca aaccgccctt
     1741 gaatgctgtg acaccaaagc catttcaaag tagtaagaac gggtataaga agaatggaag
     1801 taaacctggc cgtcgattga aaaagctttc agaccgtaag ggctttccag atctctctcc
     1861 ttctcaaaac aataaatctc ctgattgtcc aggagcatct gatgatgatc gggaagagct
     1921 gttagcagct gcaaatcatg ctcgtatagc acgtcatcta gcatgttcaa gtctattgtg
     1981 gaagaaaatg gaaccggtct ttgcctcttg tagttccgaa gttaaatcat tattatttca
     2041 acagatgggg cccccacatg aaaattcttt atccgatcaa ccttcttcta tagaaagaaa
     2101 aacacacata caacatccgg aaactgaatc attctccgaa tccaatgtgt ccgtaccatt
     2161 ataccaaaga gtactatcag cacttattat agaagatgat gttcctgaat cagaagatgc
     2221 aacatacgat acatatggct tcaatgaata tgaatctttt cctagcaacg taaatacaaa
     2281 ttcttttaaa acccctgtca acaacaattt atgcgaagat gcgaacatag aagttgagat
     2341 attaaacggg gtttcaaatg gcttcttaaa taagcagcaa acgtcagaaa aagaaggttc
     2401 tttagatgcg aaacttctac ttgagcttca gagtataggc ctatatctgg atgaactgcc
     2461 tgggttgaat gaaaaggaag atgaaacact gcagcgtgaa gtcgataagc tgaattcgag
     2521 acttcatcaa caggaggtta aaaagaaggc gtactttgag aaattacgta aaggtgttga
     2581 aagcgactct ggaatccgag accttgaaac acttgccatg gatagattgg ttgagttggc
     2641 atataaaaaa cttttgctgg ctactaaacg aagctctaga tccatgatta ataaggtgcc
     2701 aaaacaaagt gcattagctt ttggacgaag aactcttgcg cgatgtcgca aattcgaaac
     2761 ttcgggaaaa agttgcttta gtgagcctct gtatcaagat attctttctg caccgattga
     2821 aaacgagcca gatccgaacc ttttgtcaga tgaaggtttc acgacatcaa acaaaggcaa
     2881 aaagaaagaa ttttttcttg acgatattgg cactcgaacg ccatcttatg ttggtgtctc
     2941 cggaggaact aagggcaaaa gaagtgagcg ggatcctacc aaatctagaa aacctaaacc
     3001 aagacagaag tcgggtcaga ttcaagtatc cggtaccgga tcagtcaaca aaaattcgag
     3061 atccttacat cctacaggac ctacatggcc gtcgtcaaac agacccaaca acgaatcgtc
     3121 caatagatcc acacatccta cgggacccac atggccatca tcaaaaggag ccagtcaatt
     3181 ggatactagg agtaatgaag ggactggcca tacaaaccct tcgcttgatg atctagaccc
     3241 gttagacgat ttaggtgtcg ggggtgacct tggtgggcct gctgatttcg attctttttt
     3301 gaacattgat gatcatgatt tggatgaaga ttttgcagga gggctggaca tacctatgga
     3361 cgatcttaca gaattgttct gattttggtc accgtttcgt ttcaagtgta cattaatgtc
     3421 gataatctgg cagtaaggaa agaactcaga ggcagcttgc attgtaagtt ataacagcta
     3481 tatatagaaa ttggtaataa ggaagtttta tcttatacaa agggagggag agagaggtac
     3541 atggttcatt gtagagaaat ctaaattata ctagacaagt ggttttgtag gcgattcact
     3601 cgccgtagaa ggaaaatatt ggtttggaat ttagtgggat gttatagcat catttggatt
     3661 tcgatttcga ttaattagat gtctcttgaa agttgaactt tagagatttt ctctatagat
     3721 gtggtggcat tgtttgaata tcttgcgagt tcttttactc cataatgaaa ccttat
//
LOCUS       XM_071829726            4112 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839614), mRNA.
ACCESSION   XM_071829726
VERSION     XM_071829726.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4112
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4112
                     /gene="LOC139839614"
                     /note="uncharacterized LOC139839614; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139839614"
     CDS             388..3687
                     /gene="LOC139839614"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685827.1"
                     /db_xref="GeneID:139839614"
                     /translation="MEDSRVDVILEFLRRNNFARAEAALRTEIDNRPDLNGFMQGLKL
                     EDDSGGKLLEKANAAKPNAVGKQRACSSTSDEVLKEKHVVKEIERGTGRNGPDSKWEI
                     ASFDGEHNNNNSEPVGTRNETFMFSNGSEDNLLDLYTWRYDPNTDPVNSHDNDDGIRT
                     NDVKEYQISSGSKIHPSEVADTDEKVVFLGPVSNSNTNLAPNIEPKELNIQKPNMVSV
                     LKDDFVDNPWSRNDEFKRSSKDCSVKTVFPFSEGDASTSYDSTSRGVGVKEDGKRKTD
                     NIRAAIKEQENEIARALYFGKMQGSNGPQDFGVLGLPMSFENQKELPRLPPVKLKSVD
                     KLSSLTWEEKPEHDGGPGQVLSADNAYLIGSFLDVPIGQEISSSGLKGAVGGSWRSIS
                     QGITEDTSDHVSGFATIGDAMSGSIDYPNEYWDSDEYDDDDDVGYMRQPIEDETWFLA
                     HEIDYPSDNEKTTVPDHQERTVPNKNEDDDQSFIEDDSYLSGDQYLYSKTIDPGDHNM
                     AVQYDGELIDEQELTLMSAEPVWQGFVSPTNELVMFGEGKTVKEGGGARLPELSVEDD
                     QHVSVRSIGVGINNDIHNNDQQNSDKKHFEKINKDKKKTSMPDSSKLTKNVNDGGFSF
                     PPPRDGQAPTVPSQPSWSKSNNSNSILEDENDSLLPPWKRKSSDSSPISREDDDDDGD
                     VLGSEFSGPSMPSTYGFTERAHLKKDEDEKVADQIEEEEEEEEEDPGVLLEDEEAVAV
                     QEQVKQIKAQEEEYETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAA
                     FSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKFVNKHDPGDKYHLLRLYDY
                     FYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLESLQFLHGLGL
                     IHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKK
                     IDVWSLGCILAELCTGNVLFQNDSPATLLARVIGIVSPIDQDMLAKGRDTHKYFTKNH
                     MLYERNQDTNRLEYLIPKKTSLRHRLPMGDQGFIDFVSHLLEINPKKRPSAAEALKHP
                     WLSYPYEPISS"
     misc_feature    2749..3657
                     /gene="LOC139839614"
                     /note="Catalytic domain of Dual-specificity
                     tYrosine-phosphorylated and -Regulated Kinase-like protein
                     kinases; Region: PKc_DYRK_like; cd14133"
                     /db_xref="CDD:271035"
     misc_feature    order(2767..2781,2791..2793,2830..2832,2836..2838,
                     2878..2880,2938..2940,2986..2997,3004..3006,3010..3015,
                     3139..3141,3145..3147,3151..3156,3160..3162,3199..3201,
                     3208..3210,3235..3237,3241..3252,3256..3258,3367..3369)
                     /gene="LOC139839614"
                     /note="active site"
                     /db_xref="CDD:271035"
     misc_feature    order(2767..2781,2791..2793,2830..2832,2836..2838,
                     2938..2940,2986..2997,3004..3006,3139..3141,3145..3147,
                     3151..3156,3160..3162,3199..3201)
                     /gene="LOC139839614"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271035"
     misc_feature    order(2878..2880,3010..3012,3139..3141,3145..3147,
                     3208..3210,3235..3237,3241..3252,3256..3258,3367..3369)
                     /gene="LOC139839614"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:271035"
     misc_feature    order(3196..3228,3232..3258)
                     /gene="LOC139839614"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:271035"
ORIGIN      
        1 tttgattccc aaattaagaa accctaaaac caaacatcaa ctgtcatttt tctcccactc
       61 cgattaccat tcccataata ctgaaacctt cataccaaac ataccctaca tgcttcaact
      121 ctgtctgctc taatcccatc ccatccaatc tagggcacca ttttcgatct acacatcttt
      181 caattcacca ataccattcc ttcatttctc atttatatct tgttatactt ccaattcatc
      241 cttccaattt cacaattttg atgcgcattt agttttatat ctgacgtcag acaaacatac
      301 aaaaatgtat aattagtgtt acacagccaa agatccgcac ttgtaaccca cgattcggca
      361 cataatttat gaggatttag tttggaaatg gaagactcta gggtcgatgt gatactcgaa
      421 tttctacgga ggaataattt tgctagagct gaggcagcat tgcgaaccga aatcgataat
      481 cggcctgatt tgaatgggtt tatgcaaggt cttaaactcg aagatgattc gggagggaaa
      541 ttgttagaaa aggcgaacgc tgcaaaacct aacgcagtgg gaaaacaaag agcgtgttca
      601 tctacaagtg atgaagtttt gaaagaaaaa catgttgtga aagagataga acgtgggacc
      661 ggaagaaatg gacccgatag taaatgggaa attgcttctt ttgatggaga acataataat
      721 aataatagtg aaccagttgg aacacggaat gagacgttca tgttctctaa tggttcagag
      781 gataatcttc ttgatttata tacatggaga tacgacccta atactgatcc cgttaattct
      841 catgataacg acgatggtat taggactaac gatgtgaaag aatatcaaat ttcttctggg
      901 tcaaagattc atccttctga ggttgctgat acggatgaaa aagtggtgtt tctggggcct
      961 gtaagtaata gtaacacgaa tttggcccca aatattgaac ctaaggagct taatattcaa
     1021 aaaccaaata tggtatccgt gttaaaagat gattttgttg ataacccatg gtcgagaaac
     1081 gatgaattta aacgcagttc gaaagattgt tctgttaaaa ctgtattccc gttttccgaa
     1141 ggagacgcgt ctaccagtta cgatagtacg agtcgtggtg ttggtgttaa agaagatggt
     1201 aagaggaaaa ctgacaacat tcgagctgca attaaagaac aagagaatga aattgcacga
     1261 gctttgtact ttggaaaaat gcagggaagt aatggcccgc aagattttgg tgttttaggt
     1321 cttccaatgt cgtttgagaa tcagaaagaa cttccaagac tgccacctgt caaactgaag
     1381 tcggttgaca aactttcaag tttgacttgg gaggagaaac cggaacatga tggcggccct
     1441 ggacaggttc ttagtgctga caatgcttat cttataggat cgtttcttga tgttccaatc
     1501 ggtcaagaaa taagctcgtc aggtttaaaa ggggctgtag gaggtagttg gcgttccata
     1561 agtcaaggga ttacagaaga cacttcagat cacgtgtccg gtttcgcaac tatcggtgat
     1621 gcaatgagtg gatctatcga ttacccgaat gagtattggg actctgacga atatgacgac
     1681 gatgatgatg ttggatatat gagacaacca atagaagacg aaacatggtt tctagctcat
     1741 gaaattgatt atccaagtga taatgaaaaa acaacagttc cagatcatca agagagaaca
     1801 gttccaaaca aaaacgaaga tgacgatcag tcatttatag aagatgattc atacttatct
     1861 ggtgaccagt atttatattc aaaaaccatt gatccaggtg atcataacat ggctgttcag
     1921 tatgatgggg agttaattga cgaacaagag ttaactttga tgagtgcaga acccgtatgg
     1981 cagggttttg tctcaccgac taacgagctc gttatgtttg gtgaagggaa aacggttaag
     2041 gagggcggtg gggcccgttt accggagctt tctgtagagg atgatcaaca tgtttcagtt
     2101 agatcaattg gcgtgggaat caacaatgac attcataata atgatcaaca aaactctgat
     2161 aaaaagcact ttgagaaaat caataaagat aaaaagaaaa catccatgcc tgattctagt
     2221 aagttaacga aaaacgtgaa tgatggtgga ttttcgtttc cgccccctag agacgggcag
     2281 gcacctaccg ttcctagtca accttcgtgg tcaaagtcaa acaacagtaa tagtatctta
     2341 gaggatgaaa acgatagctt gcttccacca tggaaacgaa aaagctctga ttcgtctccc
     2401 atttcaaggg aagatgatga cgatgatggt gatgttttag gttcagaatt ttctggccct
     2461 tcgatgccct caacatacgg ttttactgaa cgggctcatc ttaaaaagga cgaggatgag
     2521 aaagttgccg atcaaataga agaagaagaa gaagaagaag aagaagatcc aggggtatta
     2581 ttggaagatg aagaggcagt tgctgtccaa gaacaagtga agcagataaa ggctcaagag
     2641 gaagagtatg agacctttaa tcttaaaatt gttcacagga aaaacagaac tgggtttgaa
     2701 gaggacaaga attttcacgt tgttttgaat tctgtgatcg ctggtcggta tcatgtaaca
     2761 gagtatcttg gatctgctgc atttagtaaa gctattcaag cacatgacct tcacaccggc
     2821 atggatgtgt gtgttaaaat tatcaaaaac aacaaagact tttttgacca aagtcttgat
     2881 gagataaagc ttttaaaatt tgttaacaaa cacgatcctg gtgacaaata ccatcttctc
     2941 agactctatg attacttcta ttaccgagaa catttgttaa ttgtgtgtga acttctcaag
     3001 gcaaacttgt atgaatttca taagttcaat agggaatctg gcggggaggt ttattttacc
     3061 atgcctagat tgcagtcgat aaccattcag tgtttggaat cacttcaatt tttgcatggg
     3121 cttgggctca tacactgtga tttgaagcct gagaatatat tggtgaaaag ttacagtaga
     3181 tgtgaagtaa aagtgatcga tcttggtagt agttgttttg aaacagatca tctttgttcc
     3241 tatgtgcagt ccaggtccta tcgtgcacca gaggttattt taggactccc ttatgataaa
     3301 aagattgacg tttggtccct tggctgtatc ttggctgaac tttgtactgg aaatgttctt
     3361 ttccagaatg attcaccggc tactttgctt gcaagggtga ttggaattgt atctccaatt
     3421 gaccaagata tgcttgctaa aggacgagat acacataagt acttcactaa aaatcacatg
     3481 ctttatgaac gtaatcagga tacgaacaga ttggaatacc taatcccgaa aaagacatct
     3541 ttgaggcatc ggttaccaat gggtgatcaa gggttcatcg attttgtctc tcatctgctt
     3601 gaaatcaacc caaagaaacg cccttcagct gccgaagcat tgaaacaccc atggttatca
     3661 tatccttatg aaccgatttc atcttgaaaa tgcgcagata catacaagaa agtctaacac
     3721 atgtaactta atacttgggt tcgaatggag acaaattgct tctgatcttt aaacagggtt
     3781 ttatcgaacg tacacaaagt gcatagacag gtatgtccgg gttgctggca cgtgtcctct
     3841 cccttggcca agttgtattt atatttttgc attacacaaa cttgtacttt tggtatattt
     3901 tttttttttt ttttttttta ccgattttga tttgttgtga tgaagagaaa tcttgttgta
     3961 catgactggt gatttagtaa tagtttgtga aatagccatt taaccatttt tcggttggct
     4021 tttgttgcat tttcctgccg tggccttccg tgtaggcaag caagcaccaa atgaacatca
     4081 cacgcttgag gttgagtttt ttcaaaaatt gt
//
LOCUS       XM_071829727            1185 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gamma-tocopherol
            methyltransferase, chloroplastic-like (LOC139839615), mRNA.
ACCESSION   XM_071829727
VERSION     XM_071829727.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1185
                     /gene="LOC139839615"
                     /note="gamma-tocopherol methyltransferase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 19 Proteins"
                     /db_xref="GeneID:139839615"
     CDS             142..1056
                     /gene="LOC139839615"
                     /codon_start=1
                     /product="gamma-tocopherol methyltransferase,
                     chloroplastic-like"
                     /protein_id="XP_071685828.1"
                     /db_xref="GeneID:139839615"
                     /translation="MATASGDVAVSPAPVNDSLQKGIAEFYDESSGIWENIWGEHMHH
                     GYYETNAVVELSDHRSAQIRMIEQALAFASVPDDLEKEPKSIVDVGCGIGGSSRYLAR
                     KYGAKCKGITLSPVQAERAQSLAADQGLADKVSFQVADALNQPFPDGKFDLVWSMESG
                     EHMPDKLKFVSELVRVAAPGATIIIVTWCHRDLAPTEKSLRPEEQKILNKICSSFYLH
                     AWCSTADYVKLLESLSVQDIKSADWSENVAPFWPAVIKTALSWKGITSLLRSGWKTIK
                     GAMVMPLMIEGFKKDLIKFSIITCKKPE"
     misc_feature    142..1053
                     /gene="LOC139839615"
                     /note="tocopherol O-methyltransferase; Region: PLN02244"
                     /db_xref="CDD:215135"
     polyA_site      1185
                     /gene="LOC139839615"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttgtctagt tgtatacaaa ggtcacaagt gtggtgtgta ttctgcaact tacttaggac
       61 cactcgaact attagtacat tacgtgccat tacaagttat caatagtacc accgttcatt
      121 aatctaactt tagaatcagt tatggcaaca gcctccggtg acgtagcagt ttctccggcg
      181 ccggtgaatg attcactgca aaaaggaata gcagagtttt acgacgaatc gtcaggaata
      241 tgggagaata tctggggaga gcacatgcat cacggttact atgagactaa tgccgtggtt
      301 gaactctccg atcatcgttc tgctcagatc cgtatgattg aacaagccct agctttcgcc
      361 tctgttccag atgatctgga gaaggaacct aaaagtatag tagatgtagg gtgtggtatt
      421 ggaggtagct caaggtatct agcaagaaaa tatggagcga aatgcaaggg aattaccctt
      481 agccctgtac aagctgagag ggctcagtcc ctagctgctg accaaggatt ggctgataag
      541 gtttcatttc aagttgcaga tgctttgaac caaccatttc ctgatggaaa gtttgatctg
      601 gtttggtcga tggagagtgg agagcacatg cctgacaaac taaagtttgt cagtgaattg
      661 gttcgagtgg ctgccccagg agccacaatc atcatagtta catggtgcca tagggacctt
      721 gcccctactg aaaaatcctt gcgacctgag gaacaaaaaa tcttaaacaa gatatgttct
      781 agcttttatc ttcatgcttg gtgttctact gctgattatg taaaattact tgaatccctt
      841 tcggttcagg acattaaatc agcagactgg tcagagaatg tcgccccttt ttggccggct
      901 gtaataaaaa cggcgttgtc ttggaaagga atcacttcat tgctacgtag tggatggaag
      961 actataaaag gggccatggt aatgccattg atgattgaag gatttaaaaa ggatctaatc
     1021 aagttttcta tcattacatg caaaaagcct gaatgaattg tagtatgtaa cctcatattg
     1081 tgctactgtt tcttccaatt tggcaactaa accattgtta gtattgtaat aacaattaaa
     1141 gcatgtcata tgtgtacaac aaagtttgcc atcaagtttc attta
//
LOCUS       XM_071829728            9306 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839616), transcript variant X1, mRNA.
ACCESSION   XM_071829728
VERSION     XM_071829728.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9306
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9306
                     /gene="LOC139839616"
                     /note="uncharacterized LOC139839616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839616"
     CDS             134..8911
                     /gene="LOC139839616"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685829.1"
                     /db_xref="GeneID:139839616"
                     /translation="MAATPQNVEMEAAKFLHKLIQESTDEPTKLATKLHVILQHMRTS
                     GKENSMPYQVISRAMETVIKRHGLDIDALMSSRQALTSGPLVGDSSISQSAGTKRSCP
                     SQHTTVENDSTKPIKTEDTSNAAVYSSKSLHGSGTTGHDAYQGSVNQHNSMKTVGSVA
                     GFSASYESTDPGNAAALALKGPAGKALDHEAGFSNVMASASKTLQGASSNSAAEMGVL
                     QNEALRDTGKLPVLQAPPVGPSMPFKEHHLKQLRAQCLVFLAFRNNMMPKKLHLEIAL
                     GNVFPKEDIKEHNHQKGKEQSVGPGFSNTGFVSETNLLKEAEKFDKINDKNDLPAGLP
                     EHNINSRKIEADMQAFEAKESQMPVTKVAQLDPNNIARHAGLFAMPDSQVNRHGQGHL
                     QGFPMNERHMVPKIANVLEKDVILAGNNNGGDDNSELSSSPALPKYTTSEKLIADCLK
                     RKAAADSNWAVKKQKTEQRILARVEKLKEAVSSSEDISAKTKSVIELKKLELLNLQRR
                     LRNEILNDFFRPTSNEIDRLKNIKKHRIGRRSKQIERHEQKMKEERQKRIRERQKDFF
                     GEMEQHRERLEDVFKNRRERVKGFNKYAREFHKRKERLHREKIDRIQREKINLLKIND
                     VEGYLRMVQDAKSDRVRQLLKETEKYLQKLGSKLKEAKVINRCFETDMSGVNDSGEFT
                     IENEDETDQAKHYMESNEKYYLMAHSIKETVAVQPSNLIGGKLREYQMNGLRWLLSLY
                     NNHLNGILADEMGLGKTVQVISLLCYLMENKNDRGPFLVVVPSSVLPGWESEINFWAP
                     SINKIVYSGPPEERRKLFKERIVQQKFNVLLTTYEYLMNKHDRPKLSKIHWHYVIIDE
                     GHRIKNASCKLNAELKHYHSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQ
                     WFNKPFESNADNSLEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERL
                     VRCEASAYQKLLMQRVDDSLGAFGATKARAVHNSVVELRNICNHPYLSQLHNEEVHEF
                     IPKHYLPNIIRFCGKLEMLDRLLPKLKATDHRILLFSTMTRLLDVMEDYLYWKQYRYL
                     RLDGHTSGGDRGALIDEFNRPGSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV
                     DLQAQARAHRIGQKKEVLVLRLETVKSVEEQVRASAEHKLGVANQSITAGFFDNNTSA
                     EDRREYLEALLRECKKEEAAPVLNDDALNNIIARSESEIDVFEEIDIKRQEEELSVWK
                     KLLVEQGGTSTEATPPLPPRLVTESELKSFCEAMKAIEVPKPVVVPGIGGKRSRELGN
                     LDIQHYGRGKRAREVRSYEEQWTEDEFDKLCQAENLSPPIHKEELKEQDLPVAKNESA
                     TVSATEAAVLPNVQPMQPLDRSVQQHKEINPPLKRGRGRPKKKPSGMSSTPIGYPASS
                     IPISSTPKSVPPTVQPLGVQTAPGSQLNITSPSGSKSTSSDTLTSANTNETMTVPPGF
                     QPVTDHPPGFHPTADHDHPPGFQPTVDHPPGFESLTVPPPGFKPIISPQQITPPPPGF
                     EPKMASPPPMAGSQSTPTVPAAPLPTSTLNSPSSHSIAASHSTSTSKADLPPGTLSSP
                     TLPSGPVSEPVVPPTSSDSQSTKSPAVTPGRGRGRGRGRGRGRGRGEIIDSEVVPQRR
                     GQMLHNVVLAIPNNQTSPVGKPETDSPVGPSTASEIGNKSSVSVSTNINAINSTPATA
                     SETGKKSSVSATTNINAQSSTPVTASETGNESLVSVSTNINTVSSTPVIGVADTPVQK
                     VSPSETSTADIASPKTPVPTAPVATSSTLTDTGSTMVGTTQTPVSVSVGSQFTELGTI
                     SPQTATPPVSTPIGADSATPNPVSKQGRGRGRKAAESGLGSPRLTRRKKKDLVEAQEK
                     TSNEPVQKKTRVSSGRKTVATRSMLRNEAQKGKDQPILTDDHSGKGNKLGQSSELSKF
                     ADASTVDNSLSTQEEKVEEPKGIAVATESVSKIRDAGKDTKPDELDPKTSINMEKGTE
                     SKSETLEGKGSKPSKEVEKLSHTEDTLATKVDLKEETEQEELAIACTASEDANKDNKT
                     EVIVSESECPVKKVSKTEENNPIIIGETLEADTAEGAIEDNVVEVVQKRKTVNTYIIG
                     DLQVETEAASSKSTDEISHKESEFKEKDQGAEDPIREDVVDTIKTSLELSVTQGEGDD
                     PANVEGSSVVERDAKSSDDVVETSGVSDDVEKAVVEDENTTDDPPVKEVEDACQGETE
                     NEKLGDVSSIAENVVDVETIHAPPVSVDEMEGVETSVSESPLDTGVKPFEKADAASLV
                     DTGKQEIDHSDRDTVMEIDDKSSQKLENPESEESVKVLPDVQETIEVSETTDGAMPVN
                     TEVTPFEENNNEMPGESVIGAEQSTDSLPLQEDENGGLDVDKENLGEAITEQGQQATE
                     CNASGDTGKDNRTEMMLENDGPVEKKTEEDDVALIDGDTLEADPAEGVAIEENVVEIV
                     QRASSPVLQRTTESSGIIDDLPVEAETTSSKRTEEISHAEMEYKEKVQEANDLIMEDV
                     VNTNKTSIELSIAQVKVERNDVATVEVSNIVDAKSSDDVVEAIGVSGDLGKDVSGEKT
                     ADDPHVKEGEAEVFETFNAGSPLDTGVESSKKADDVSMVETEKQENDSIERGTLMEMD
                     DKSSEKLEDSAGCAEKDIQLPDAQDETGTLDANKEILNDAEPKPVEIVNKGIQVVAES
                     ENLKGCADALEVKWKDLHVGQVDGRSAETINAESLDNTQAESSNKLDGPCEDKSLHNE
                     KDHKPPAEIVESTKDLSVSEVAAQKNVEEREIKPSKIGSDVSTDQELDDSTNELIVSE
                     VASQSPMEENETEPSKTGIDVSTIKGITGTDASTSIEEKESAKELSVSEVASQSHKEE
                     KETEPSKTDDDSTVLEHATVKDQDISEEILSSDVGVPDQ"
     misc_feature    1700..>2119
                     /gene="LOC139839616"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:464007"
     misc_feature    1913..>4240
                     /gene="LOC139839616"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    <4259..4867
                     /gene="LOC139839616"
                     /note="Sine oculis-binding protein; Region: SOBP;
                     pfam15279"
                     /db_xref="CDD:464609"
     misc_feature    <4637..5797
                     /gene="LOC139839616"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    6083..8830
                     /gene="LOC139839616"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     polyA_site      9306
                     /gene="LOC139839616"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagtcatat gaaatctgca tctatacgtt tcacataaag tgagcaatcc acttcattag
       61 gtagttctca gagcaaatat cgtgattcgt gatcctaatt aaagtagtga agtagtaata
      121 ctagtaaata aatatggcgg caactcccca aaatgttgag atggaagcag caaagttttt
      181 gcataagctt attcaggaat ctactgatga accgacgaaa ttggctacaa aattacacgt
      241 gattttgcag cacatgagaa ccagtggaaa ggagaattca atgccatacc aagttatatc
      301 aagggctatg gagacagtca taaaaagaca cggtcttgat atagatgctt taatgtcttc
      361 acgacaagca ttgactagcg gacctttagt cggagattca tccatatccc aatctgcagg
      421 tacaaaaaga tcatgtcctt cacagcatac cactgtggaa aatgattcca caaaacctat
      481 aaaaacggag gacacatcaa atgctgcagt ctattcaagc aaatccctgc atggttctgg
      541 tactacaggg catgacgctt atcagggatc tgtaaatcaa cacaactcta tgaagactgt
      601 tggatctgtt gccggttttt ctgcttcata tgaatctacg gaccctggaa acgctgcagc
      661 attggcgctt aaaggcccgg ctggtaaggc attggaccat gaagctgggt tctcaaatgt
      721 gatggcaagt gcaagtaaga cacttcaggg tgctagctcg aacagtgctg ctgaaatggg
      781 agtgcttcaa aatgaagctt taagagatac tggaaagttg ccggtgttgc aggcaccgcc
      841 agttggacct tccatgcctt ttaaggaaca tcatttaaag cagcttagag cacaatgtct
      901 tgtatttttg gccttcagga acaatatgat gccaaaaaag ttgcatcttg agattgccct
      961 aggaaatgtc tttcccaagg aagatattaa ggaacataat catcagaagg ggaaggagca
     1021 atctgttggt cctggtttct ccaacaccgg atttgtttca gaaacaaacc tattaaaaga
     1081 agccgagaaa tttgacaaga tcaatgataa aaatgaccta cccgctggtc ttcctgaaca
     1141 taatatcaat tcaaggaaga ttgaggcaga catgcaagct tttgaggcaa aagaatcgca
     1201 gatgcctgta actaaagtag cacagttaga tccaaataat attgcacgac acgctggcct
     1261 atttgctatg cctgatagcc aagtgaaccg gcatggtcag ggtcatttgc aaggttttcc
     1321 tatgaatgaa aggcacatgg tcccgaagat tgctaatgtt cttgaaaagg atgtaatact
     1381 tgcaggaaac aataatgggg gagatgataa ttctgaacta agttcttcac cagcattgcc
     1441 aaagtatact acatctgaaa agttgattgc agattgccta aagaggaaag ctgctgctga
     1501 ttctaactgg gctgtcaaaa agcagaaaac agagcagagg atcttggctc gtgttgagaa
     1561 gttaaaggaa gcagtcagct cttctgaaga catatcagca aaaaccaaga gtgtcattga
     1621 gctaaaaaaa cttgaactcc taaatctcca acgtcgccta cggaatgaga tcctgaatga
     1681 cttctttaga cctacatcta atgagattga tcgccttaaa aatatcaaaa aacataggat
     1741 tggtcgacga tcaaagcaaa tagagaggca tgagcagaaa atgaaagaag agcgtcaaaa
     1801 gagaattcga gaacgacaga aggacttctt tggtgaaatg gaacaacaca gggaaaggct
     1861 ggaagatgta tttaaaaata ggagagaacg agtgaaaggg tttaacaagt atgcaagaga
     1921 gtttcataaa aggaaggaaa gacttcatag ggagaagatt gatagaattc agcgggaaaa
     1981 gattaatctt ttgaaaatta atgacgttga gggttatctt cgaatggttc aggatgcaaa
     2041 gtcggatcga gtgaggcaac tattgaaaga gactgagaag tatcttcaga agcttggatc
     2101 taagctgaaa gaggcaaagg ttataaacag atgctttgag actgatatga gtggtgtaaa
     2161 tgacagtggt gaatttacaa ttgagaatga agatgaaact gaccaggcga agcattatat
     2221 ggagagcaat gagaagtact atctaatggc tcatagcatc aaagagactg tagcagtgca
     2281 gccatcaaat cttattggtg gaaaattgag agagtaccaa atgaatggat tacgatggct
     2341 actgtcactg tacaacaatc atttgaatgg cattcttgca gatgagatgg gcctagggaa
     2401 aactgttcag gttatttctc tactatgtta tctgatggaa aataaaaatg atagagggcc
     2461 atttttggtg gttgtgccat cctcagttct gcctggatgg gagtcggaga ttaacttctg
     2521 ggcccctagc atcaacaaaa ttgtctactc tggtcctcct gaggagcgtc ggaaattatt
     2581 taaggagaga attgttcagc aaaagttcaa tgttctattg acaacgtacg agtatctcat
     2641 gaacaaacat gacagaccaa agctgagcaa aatacattgg cattatgtca ttattgatga
     2701 aggtcatcgt ataaagaatg cttcgtgcaa gctcaatgct gaattgaagc attatcatag
     2761 ttcccataga ttgcttttga ctggaactcc tttgcagaat aatcttgagg aactatgggc
     2821 acttcttaac tttctattgc caaatatttt taattcgtca gaggattttt cccaatggtt
     2881 caacaaacca tttgaaagta atgcagacaa ctcacttgaa gaggctttgc tctctgagga
     2941 ggaaaatcta ttaattataa accgtcttca ccaagttttg cgcccatttg tgcttagaag
     3001 actgaaacac aaggttgaga atgagctacc tgaaaagata gaaagacttg taagatgtga
     3061 ggcttctgca tatcaaaagc tattgatgca gagggtagat gacagtcttg gtgcatttgg
     3121 tgctacaaag gctcgagcag tgcacaattc tgtcgttgaa ttacgaaata tttgcaatca
     3181 tccgtacctt agccagcttc ataatgaaga ggttcatgaa ttcattccaa agcattatct
     3241 tccaaatatt ataaggtttt gtgggaagct tgagatgtta gatagactgt tgcccaagct
     3301 aaaagctaca gatcatcgga tacttctctt ctcaacgatg acccggctcc ttgatgttat
     3361 ggaggattat ttgtattgga aacagtatcg gtaccttcgt ttagatggac acacatctgg
     3421 aggtgaccgt ggggcattaa ttgatgagtt caacagacca ggatcgccat atttcatatt
     3481 cctactcagt atacgtgctg gtggtgttgg agttaatctt caagctgcgg atacagtcat
     3541 tatttttgac acagattgga atccacaggt tgacctgcaa gcacaggcta gggctcacag
     3601 gataggtcag aagaaggaag tactcgttct tcggttagaa actgttaaat cggtagagga
     3661 gcaagttcga gcttcagctg agcacaaact tggagttgct aatcagagca ttactgctgg
     3721 gttttttgac aataacacaa gtgcggaaga ccgaagagaa tacttggagg ctctgctgcg
     3781 tgagtgtaag aaagaggaag cggctcctgt cttaaatgat gatgctctca ataatatcat
     3841 agccaggagt gagtctgaaa ttgacgtatt tgaggaaatt gatataaaac ggcaagaaga
     3901 ggagctgtct gtatggaaaa agttgttagt tgagcaaggg ggaacaagta cagaagccac
     3961 acctcccctt cctcctaggc ttgtgacgga aagtgaattg aagtcattct gtgaagctat
     4021 gaaggcaatt gaagttccta aacctgtagt tgtcccaggt atcggaggta aaaggagtag
     4081 agagcttggg aacttagata ttcaacatta tggaagggga aagcgtgcac gagaggtgcg
     4141 ttcttatgag gagcaatgga cggaagacga atttgataag ctatgtcaag ctgaaaatct
     4201 cagccctcct atccacaagg aagaactaaa agaacaggat ttgcccgttg ccaaaaatga
     4261 atctgccacg gtcagtgcta cagaagctgc agtgttgcca aacgtacagc caatgcaacc
     4321 tttggatcgc agcgttcaac agcacaagga gataaatccc ccattaaaac ggggtcgtgg
     4381 taggcctaaa aagaaaccat cagggatgtc ttcaactcca attggttatc cagcatcttc
     4441 aatacctatc tcttctactc ctaaaagtgt tcctccaact gtccaaccgt tgggtgtaca
     4501 aacggctcct ggttctcagt tgaatattac cagcccttct ggttccaagt caacttcctc
     4561 tgatacattg acatctgcta atactaatga gaccatgact gtgcctcctg gttttcagcc
     4621 agttacagat catcctcctg gttttcatcc aactgcagat catgatcatc ctcctggttt
     4681 tcagccaact gtagatcatc ctcctggttt tgaatcgttg accgttcccc ctccaggctt
     4741 taagcccatt atctctcctc agcagataac ccctccaccc cctggattcg aaccgaagat
     4801 ggcatcaccc cctcccatgg caggttctca gtcaacccct actgtccctg ctgcaccctt
     4861 accaaccagc accttgaatt ctcccagttc tcattcgatt gccgcatctc attctacctc
     4921 tacatccaag gcagatctcc ctcctggcac tctatcaagc cctactttac cttcgggtcc
     4981 cgtttcagag ccagtggtcc ccccaacctc atccgattcc cagtctacta aatctcctgc
     5041 agtgacacct ggcagaggca gaggtcgggg acgtggtcgg ggtcgaggta gaggccgtgg
     5101 tgaaataatt gattctgaag ttgttcccca acgcaggggt cagatgctgc ataatgtggt
     5161 attagctatt cccaataatc aaacttctcc agttggcaag ccagaaacag attccccagt
     5221 gggtccctct actgcttctg aaataggcaa caagtcttcg gtttccgtct ccactaatat
     5281 aaatgctatc aatagcacac cagctactgc ttctgaaaca ggcaaaaagt cttcggtttc
     5341 tgccaccact aatataaatg ctcagagtag cacaccagtt actgcttctg aaacaggcaa
     5401 cgagtccttg gtttctgtct ccactaatat aaatactgtc agtagcacac cagttatagg
     5461 ggtagctgat actcctgtac aaaaagtatc cccttctgaa acctccactg ctgatatcgc
     5521 atcaccaaaa acaccagtcc ctactgcacc tgtcgctaca tcttctacgt tgacagacac
     5581 cggtagtacc atggtgggga ccacacagac acctgtttcc gtttctgtag gttctcagtt
     5641 cactgagctt ggaacaataa gtcctcagac agctacacca cctgtatcta ctccgattgg
     5701 cgctgattct gcaactccta atcctgtatc aaagcaaggt cgaggacgcg gaagaaaggc
     5761 ggctgagagt gggttagggt cacctcgcct cacgcgaagg aagaaaaagg atttggtaga
     5821 agctcaggag aaaacatcta atgaaccagt acagaagaaa acacgagtat cttctggtag
     5881 aaaaaccgta gctacaagaa gtatgctacg aaatgaagct cagaaaggga aagatcaacc
     5941 tatcctaaca gatgaccatt ccggcaaagg taataagttg ggtcaatcgt cagaattaag
     6001 caagtttgcc gatgcaagta cagtagacaa tagcttaagt acccaagagg agaaggttga
     6061 agagccaaaa ggtattgcag tggccactga gtcagtttca aagattcgtg atgctggtaa
     6121 agataccaag cctgacgaat tggatcccaa gacatcaatt aatatggaga agggaacaga
     6181 gtccaaatca gagacgctgg aggggaaagg gtccaaaccc tctaaagaag ttgagaagtt
     6241 gtcccacact gaggatactt tagccacaaa agttgatctc aaggaagaga ctgagcaaga
     6301 ggaactagca atagcttgca ctgcttcaga agatgctaac aaagataata aaactgaagt
     6361 tatcgtgtct gaaagcgaat gtcctgtcaa aaaggtatcc aagactgaag aaaacaatcc
     6421 tataatcatt ggagagaccc tggaggctga cactgctgaa ggagccattg aagataatgt
     6481 agttgaagtt gttcaaaagc gtaagaccgt gaatacttac attattggag acttacaggt
     6541 ggaaactgaa gctgcctctt caaaaagcac cgatgagatc tcccataaag aatctgagtt
     6601 taaggagaag gatcaaggag ctgaagatcc cataagggaa gatgtggttg ataccatcaa
     6661 gacatcgtta gagctttctg ttacacaggg cgagggagat gatcctgcaa atgttgaagg
     6721 aagcagtgta gttgaaagag atgctaaatc atctgacgat gtagtggaaa caagtggtgt
     6781 gtcagatgac gttgaaaaag ctgtagttga ggatgagaat acaacagatg atccccctgt
     6841 taaagaagtt gaagatgcct gtcaaggaga aactgagaat gagaaattgg gagatgttag
     6901 ttccattgca gaaaatgtag ttgacgtgga gacaatacat gctcctcccg tcagtgtgga
     6961 tgaaatggaa ggtgttgaaa caagtgtttc agaatctcca ttagacacag gtgtcaaacc
     7021 ttttgaaaaa gctgatgctg cctccttggt ggatacgggt aaacaagaaa ttgaccacag
     7081 tgacagagat acggtgatgg agatagatga caaatcctct caaaagttgg agaaccctga
     7141 aagtgaggaa tcagtaaaag tacttcctga tgtacaggag acaattgagg tttctgaaac
     7201 cactgatggt gctatgcctg tgaacacgga agtcacccct tttgaagaga acaataatga
     7261 aatgccggga gagtctgtta ttggtgctga acagagtaca gattctcttc ctcttcaaga
     7321 ggatgaaaac ggcggccttg atgttgacaa agagaatctc ggtgaggcaa taactgagca
     7381 ggggcaacaa gcgacagagt gcaatgcttc aggagatact ggcaaggata ataggactga
     7441 aatgatgctt gaaaatgatg gtcccgttga aaagaagact gaagaagacg atgttgcgct
     7501 cattgatgga gacaccctgg aagccgaccc tgctgaagga gttgcgattg aagaaaatgt
     7561 agtcgagatt gttcagaggg catcaagtcc tgttctgcag cgtacaactg agagttcagg
     7621 gattattgat gacttacccg tggaagcaga aactacttcg tcaaaaagga ccgaagaaat
     7681 ctcccatgca gaaatggagt acaaggagaa ggttcaagaa gctaatgatc tcataatgga
     7741 agatgtagtt aataccaaca agacatcgat tgagctttcc attgcacagg ttaaggttga
     7801 gagaaatgat gttgcaactg ttgaagtaag caacattgtt gatgctaaat cctctgatga
     7861 tgtagtggaa gcaattggcg tgtcgggtga ccttggaaag gatgtatctg gtgagaagac
     7921 agcagatgat ccccatgtta aagagggtga agcggaagtc tttgaaacat ttaatgcagg
     7981 atccccgctc gacactggtg tcgaatcatc taaaaaagct gatgacgtct ccatggtgga
     8041 aacggaaaaa caagaaaatg atagcattga gagaggcaca ctgatggaga tggatgacaa
     8101 atcctctgaa aagttggagg atagtgcagg ttgcgctgag aaggatattc aactacctga
     8161 tgcacaggat gaaacaggca ctctagatgc caacaaagag attctcaatg acgcagaacc
     8221 aaaacccgtt gaaatagtga acaaaggcat ccaagtggta gctgaaagtg agaatctaaa
     8281 aggatgtgct gacgcattag aagtcaaatg gaaggatctt catgttggcc aggttgatgg
     8341 aagaagtgct gaaaccatca atgcagaatc cctggataat acacaggccg agtcgtccaa
     8401 taaattagac ggaccctgtg aggacaaaag tttgcataac gaaaaagatc acaaacctcc
     8461 agctgagatc gttgagtcaa caaaggatct ttctgtttca gaagtcgctg cacaaaaaaa
     8521 tgtggaagaa agagagatta aaccttctaa aatagggtct gatgtttcta cagaccaaga
     8581 actagatgac tcaacaaatg agcttatcgt ttcagaagtt gcttcacaaa gccccatgga
     8641 agaaaacgaa acggaacctt ctaaaacagg aattgacgtc tcaacaatta aaggaattac
     8701 agggaccgat gcttcaacat ctatagaaga aaaggagtca gctaaagagc tctctgtttc
     8761 agaagttgct tcacaaagcc acaaggaaga aaaggagacc gaaccttcta aaacagatga
     8821 tgattcgact gtcttggaac atgcaactgt caaggaccaa gatatcagtg aagaaatctt
     8881 gagcagtgat gttggagtgc ctgatcagta ggctaaatat ttaaacaaac agaacattag
     8941 ccgtaattat ggtttagctt gtatggttgt agctatgtaa caaatattga aactgctctt
     9001 atatgcttaa gctgatgtgt taattattgg ttttaccatc ttatagaggt atccatgtct
     9061 cttaaacatg gtaaaatatg atatgtaagt gatgtggtat gaaaacttga ggaacaagta
     9121 aaagggttta cttgaaaagc aagcaagtaa tttgctggaa tatttttatt agaaaagttt
     9181 taattatttg ttttaggaaa cttaattagg tcttatgtgc ctatatatag gaattaggat
     9241 atatgtttat gttattttca ttcaattttt aagtcaataa agttctgtgt tcttgtttac
     9301 tcttca
//
LOCUS       XM_071829729            9256 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839616), transcript variant X2, mRNA.
ACCESSION   XM_071829729
VERSION     XM_071829729.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9256
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9256
                     /gene="LOC139839616"
                     /note="uncharacterized LOC139839616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839616"
     CDS             84..8861
                     /gene="LOC139839616"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685830.1"
                     /db_xref="GeneID:139839616"
                     /translation="MAATPQNVEMEAAKFLHKLIQESTDEPTKLATKLHVILQHMRTS
                     GKENSMPYQVISRAMETVIKRHGLDIDALMSSRQALTSGPLVGDSSISQSAGTKRSCP
                     SQHTTVENDSTKPIKTEDTSNAAVYSSKSLHGSGTTGHDAYQGSVNQHNSMKTVGSVA
                     GFSASYESTDPGNAAALALKGPAGKALDHEAGFSNVMASASKTLQGASSNSAAEMGVL
                     QNEALRDTGKLPVLQAPPVGPSMPFKEHHLKQLRAQCLVFLAFRNNMMPKKLHLEIAL
                     GNVFPKEDIKEHNHQKGKEQSVGPGFSNTGFVSETNLLKEAEKFDKINDKNDLPAGLP
                     EHNINSRKIEADMQAFEAKESQMPVTKVAQLDPNNIARHAGLFAMPDSQVNRHGQGHL
                     QGFPMNERHMVPKIANVLEKDVILAGNNNGGDDNSELSSSPALPKYTTSEKLIADCLK
                     RKAAADSNWAVKKQKTEQRILARVEKLKEAVSSSEDISAKTKSVIELKKLELLNLQRR
                     LRNEILNDFFRPTSNEIDRLKNIKKHRIGRRSKQIERHEQKMKEERQKRIRERQKDFF
                     GEMEQHRERLEDVFKNRRERVKGFNKYAREFHKRKERLHREKIDRIQREKINLLKIND
                     VEGYLRMVQDAKSDRVRQLLKETEKYLQKLGSKLKEAKVINRCFETDMSGVNDSGEFT
                     IENEDETDQAKHYMESNEKYYLMAHSIKETVAVQPSNLIGGKLREYQMNGLRWLLSLY
                     NNHLNGILADEMGLGKTVQVISLLCYLMENKNDRGPFLVVVPSSVLPGWESEINFWAP
                     SINKIVYSGPPEERRKLFKERIVQQKFNVLLTTYEYLMNKHDRPKLSKIHWHYVIIDE
                     GHRIKNASCKLNAELKHYHSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQ
                     WFNKPFESNADNSLEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERL
                     VRCEASAYQKLLMQRVDDSLGAFGATKARAVHNSVVELRNICNHPYLSQLHNEEVHEF
                     IPKHYLPNIIRFCGKLEMLDRLLPKLKATDHRILLFSTMTRLLDVMEDYLYWKQYRYL
                     RLDGHTSGGDRGALIDEFNRPGSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV
                     DLQAQARAHRIGQKKEVLVLRLETVKSVEEQVRASAEHKLGVANQSITAGFFDNNTSA
                     EDRREYLEALLRECKKEEAAPVLNDDALNNIIARSESEIDVFEEIDIKRQEEELSVWK
                     KLLVEQGGTSTEATPPLPPRLVTESELKSFCEAMKAIEVPKPVVVPGIGGKRSRELGN
                     LDIQHYGRGKRAREVRSYEEQWTEDEFDKLCQAENLSPPIHKEELKEQDLPVAKNESA
                     TVSATEAAVLPNVQPMQPLDRSVQQHKEINPPLKRGRGRPKKKPSGMSSTPIGYPASS
                     IPISSTPKSVPPTVQPLGVQTAPGSQLNITSPSGSKSTSSDTLTSANTNETMTVPPGF
                     QPVTDHPPGFHPTADHDHPPGFQPTVDHPPGFESLTVPPPGFKPIISPQQITPPPPGF
                     EPKMASPPPMAGSQSTPTVPAAPLPTSTLNSPSSHSIAASHSTSTSKADLPPGTLSSP
                     TLPSGPVSEPVVPPTSSDSQSTKSPAVTPGRGRGRGRGRGRGRGRGEIIDSEVVPQRR
                     GQMLHNVVLAIPNNQTSPVGKPETDSPVGPSTASEIGNKSSVSVSTNINAINSTPATA
                     SETGKKSSVSATTNINAQSSTPVTASETGNESLVSVSTNINTVSSTPVIGVADTPVQK
                     VSPSETSTADIASPKTPVPTAPVATSSTLTDTGSTMVGTTQTPVSVSVGSQFTELGTI
                     SPQTATPPVSTPIGADSATPNPVSKQGRGRGRKAAESGLGSPRLTRRKKKDLVEAQEK
                     TSNEPVQKKTRVSSGRKTVATRSMLRNEAQKGKDQPILTDDHSGKGNKLGQSSELSKF
                     ADASTVDNSLSTQEEKVEEPKGIAVATESVSKIRDAGKDTKPDELDPKTSINMEKGTE
                     SKSETLEGKGSKPSKEVEKLSHTEDTLATKVDLKEETEQEELAIACTASEDANKDNKT
                     EVIVSESECPVKKVSKTEENNPIIIGETLEADTAEGAIEDNVVEVVQKRKTVNTYIIG
                     DLQVETEAASSKSTDEISHKESEFKEKDQGAEDPIREDVVDTIKTSLELSVTQGEGDD
                     PANVEGSSVVERDAKSSDDVVETSGVSDDVEKAVVEDENTTDDPPVKEVEDACQGETE
                     NEKLGDVSSIAENVVDVETIHAPPVSVDEMEGVETSVSESPLDTGVKPFEKADAASLV
                     DTGKQEIDHSDRDTVMEIDDKSSQKLENPESEESVKVLPDVQETIEVSETTDGAMPVN
                     TEVTPFEENNNEMPGESVIGAEQSTDSLPLQEDENGGLDVDKENLGEAITEQGQQATE
                     CNASGDTGKDNRTEMMLENDGPVEKKTEEDDVALIDGDTLEADPAEGVAIEENVVEIV
                     QRASSPVLQRTTESSGIIDDLPVEAETTSSKRTEEISHAEMEYKEKVQEANDLIMEDV
                     VNTNKTSIELSIAQVKVERNDVATVEVSNIVDAKSSDDVVEAIGVSGDLGKDVSGEKT
                     ADDPHVKEGEAEVFETFNAGSPLDTGVESSKKADDVSMVETEKQENDSIERGTLMEMD
                     DKSSEKLEDSAGCAEKDIQLPDAQDETGTLDANKEILNDAEPKPVEIVNKGIQVVAES
                     ENLKGCADALEVKWKDLHVGQVDGRSAETINAESLDNTQAESSNKLDGPCEDKSLHNE
                     KDHKPPAEIVESTKDLSVSEVAAQKNVEEREIKPSKIGSDVSTDQELDDSTNELIVSE
                     VASQSPMEENETEPSKTGIDVSTIKGITGTDASTSIEEKESAKELSVSEVASQSHKEE
                     KETEPSKTDDDSTVLEHATVKDQDISEEILSSDVGVPDQ"
     misc_feature    1650..>2069
                     /gene="LOC139839616"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:464007"
     misc_feature    1863..>4190
                     /gene="LOC139839616"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    <4209..4817
                     /gene="LOC139839616"
                     /note="Sine oculis-binding protein; Region: SOBP;
                     pfam15279"
                     /db_xref="CDD:464609"
     misc_feature    <4587..5747
                     /gene="LOC139839616"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    6033..8780
                     /gene="LOC139839616"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     polyA_site      9256
                     /gene="LOC139839616"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tccacttcat taggtagttc tcagagcaaa tatcgtgatt cgtgatccta attaaagtag
       61 tgaagtaata ctagtaaata aatatggcgg caactcccca aaatgttgag atggaagcag
      121 caaagttttt gcataagctt attcaggaat ctactgatga accgacgaaa ttggctacaa
      181 aattacacgt gattttgcag cacatgagaa ccagtggaaa ggagaattca atgccatacc
      241 aagttatatc aagggctatg gagacagtca taaaaagaca cggtcttgat atagatgctt
      301 taatgtcttc acgacaagca ttgactagcg gacctttagt cggagattca tccatatccc
      361 aatctgcagg tacaaaaaga tcatgtcctt cacagcatac cactgtggaa aatgattcca
      421 caaaacctat aaaaacggag gacacatcaa atgctgcagt ctattcaagc aaatccctgc
      481 atggttctgg tactacaggg catgacgctt atcagggatc tgtaaatcaa cacaactcta
      541 tgaagactgt tggatctgtt gccggttttt ctgcttcata tgaatctacg gaccctggaa
      601 acgctgcagc attggcgctt aaaggcccgg ctggtaaggc attggaccat gaagctgggt
      661 tctcaaatgt gatggcaagt gcaagtaaga cacttcaggg tgctagctcg aacagtgctg
      721 ctgaaatggg agtgcttcaa aatgaagctt taagagatac tggaaagttg ccggtgttgc
      781 aggcaccgcc agttggacct tccatgcctt ttaaggaaca tcatttaaag cagcttagag
      841 cacaatgtct tgtatttttg gccttcagga acaatatgat gccaaaaaag ttgcatcttg
      901 agattgccct aggaaatgtc tttcccaagg aagatattaa ggaacataat catcagaagg
      961 ggaaggagca atctgttggt cctggtttct ccaacaccgg atttgtttca gaaacaaacc
     1021 tattaaaaga agccgagaaa tttgacaaga tcaatgataa aaatgaccta cccgctggtc
     1081 ttcctgaaca taatatcaat tcaaggaaga ttgaggcaga catgcaagct tttgaggcaa
     1141 aagaatcgca gatgcctgta actaaagtag cacagttaga tccaaataat attgcacgac
     1201 acgctggcct atttgctatg cctgatagcc aagtgaaccg gcatggtcag ggtcatttgc
     1261 aaggttttcc tatgaatgaa aggcacatgg tcccgaagat tgctaatgtt cttgaaaagg
     1321 atgtaatact tgcaggaaac aataatgggg gagatgataa ttctgaacta agttcttcac
     1381 cagcattgcc aaagtatact acatctgaaa agttgattgc agattgccta aagaggaaag
     1441 ctgctgctga ttctaactgg gctgtcaaaa agcagaaaac agagcagagg atcttggctc
     1501 gtgttgagaa gttaaaggaa gcagtcagct cttctgaaga catatcagca aaaaccaaga
     1561 gtgtcattga gctaaaaaaa cttgaactcc taaatctcca acgtcgccta cggaatgaga
     1621 tcctgaatga cttctttaga cctacatcta atgagattga tcgccttaaa aatatcaaaa
     1681 aacataggat tggtcgacga tcaaagcaaa tagagaggca tgagcagaaa atgaaagaag
     1741 agcgtcaaaa gagaattcga gaacgacaga aggacttctt tggtgaaatg gaacaacaca
     1801 gggaaaggct ggaagatgta tttaaaaata ggagagaacg agtgaaaggg tttaacaagt
     1861 atgcaagaga gtttcataaa aggaaggaaa gacttcatag ggagaagatt gatagaattc
     1921 agcgggaaaa gattaatctt ttgaaaatta atgacgttga gggttatctt cgaatggttc
     1981 aggatgcaaa gtcggatcga gtgaggcaac tattgaaaga gactgagaag tatcttcaga
     2041 agcttggatc taagctgaaa gaggcaaagg ttataaacag atgctttgag actgatatga
     2101 gtggtgtaaa tgacagtggt gaatttacaa ttgagaatga agatgaaact gaccaggcga
     2161 agcattatat ggagagcaat gagaagtact atctaatggc tcatagcatc aaagagactg
     2221 tagcagtgca gccatcaaat cttattggtg gaaaattgag agagtaccaa atgaatggat
     2281 tacgatggct actgtcactg tacaacaatc atttgaatgg cattcttgca gatgagatgg
     2341 gcctagggaa aactgttcag gttatttctc tactatgtta tctgatggaa aataaaaatg
     2401 atagagggcc atttttggtg gttgtgccat cctcagttct gcctggatgg gagtcggaga
     2461 ttaacttctg ggcccctagc atcaacaaaa ttgtctactc tggtcctcct gaggagcgtc
     2521 ggaaattatt taaggagaga attgttcagc aaaagttcaa tgttctattg acaacgtacg
     2581 agtatctcat gaacaaacat gacagaccaa agctgagcaa aatacattgg cattatgtca
     2641 ttattgatga aggtcatcgt ataaagaatg cttcgtgcaa gctcaatgct gaattgaagc
     2701 attatcatag ttcccataga ttgcttttga ctggaactcc tttgcagaat aatcttgagg
     2761 aactatgggc acttcttaac tttctattgc caaatatttt taattcgtca gaggattttt
     2821 cccaatggtt caacaaacca tttgaaagta atgcagacaa ctcacttgaa gaggctttgc
     2881 tctctgagga ggaaaatcta ttaattataa accgtcttca ccaagttttg cgcccatttg
     2941 tgcttagaag actgaaacac aaggttgaga atgagctacc tgaaaagata gaaagacttg
     3001 taagatgtga ggcttctgca tatcaaaagc tattgatgca gagggtagat gacagtcttg
     3061 gtgcatttgg tgctacaaag gctcgagcag tgcacaattc tgtcgttgaa ttacgaaata
     3121 tttgcaatca tccgtacctt agccagcttc ataatgaaga ggttcatgaa ttcattccaa
     3181 agcattatct tccaaatatt ataaggtttt gtgggaagct tgagatgtta gatagactgt
     3241 tgcccaagct aaaagctaca gatcatcgga tacttctctt ctcaacgatg acccggctcc
     3301 ttgatgttat ggaggattat ttgtattgga aacagtatcg gtaccttcgt ttagatggac
     3361 acacatctgg aggtgaccgt ggggcattaa ttgatgagtt caacagacca ggatcgccat
     3421 atttcatatt cctactcagt atacgtgctg gtggtgttgg agttaatctt caagctgcgg
     3481 atacagtcat tatttttgac acagattgga atccacaggt tgacctgcaa gcacaggcta
     3541 gggctcacag gataggtcag aagaaggaag tactcgttct tcggttagaa actgttaaat
     3601 cggtagagga gcaagttcga gcttcagctg agcacaaact tggagttgct aatcagagca
     3661 ttactgctgg gttttttgac aataacacaa gtgcggaaga ccgaagagaa tacttggagg
     3721 ctctgctgcg tgagtgtaag aaagaggaag cggctcctgt cttaaatgat gatgctctca
     3781 ataatatcat agccaggagt gagtctgaaa ttgacgtatt tgaggaaatt gatataaaac
     3841 ggcaagaaga ggagctgtct gtatggaaaa agttgttagt tgagcaaggg ggaacaagta
     3901 cagaagccac acctcccctt cctcctaggc ttgtgacgga aagtgaattg aagtcattct
     3961 gtgaagctat gaaggcaatt gaagttccta aacctgtagt tgtcccaggt atcggaggta
     4021 aaaggagtag agagcttggg aacttagata ttcaacatta tggaagggga aagcgtgcac
     4081 gagaggtgcg ttcttatgag gagcaatgga cggaagacga atttgataag ctatgtcaag
     4141 ctgaaaatct cagccctcct atccacaagg aagaactaaa agaacaggat ttgcccgttg
     4201 ccaaaaatga atctgccacg gtcagtgcta cagaagctgc agtgttgcca aacgtacagc
     4261 caatgcaacc tttggatcgc agcgttcaac agcacaagga gataaatccc ccattaaaac
     4321 ggggtcgtgg taggcctaaa aagaaaccat cagggatgtc ttcaactcca attggttatc
     4381 cagcatcttc aatacctatc tcttctactc ctaaaagtgt tcctccaact gtccaaccgt
     4441 tgggtgtaca aacggctcct ggttctcagt tgaatattac cagcccttct ggttccaagt
     4501 caacttcctc tgatacattg acatctgcta atactaatga gaccatgact gtgcctcctg
     4561 gttttcagcc agttacagat catcctcctg gttttcatcc aactgcagat catgatcatc
     4621 ctcctggttt tcagccaact gtagatcatc ctcctggttt tgaatcgttg accgttcccc
     4681 ctccaggctt taagcccatt atctctcctc agcagataac ccctccaccc cctggattcg
     4741 aaccgaagat ggcatcaccc cctcccatgg caggttctca gtcaacccct actgtccctg
     4801 ctgcaccctt accaaccagc accttgaatt ctcccagttc tcattcgatt gccgcatctc
     4861 attctacctc tacatccaag gcagatctcc ctcctggcac tctatcaagc cctactttac
     4921 cttcgggtcc cgtttcagag ccagtggtcc ccccaacctc atccgattcc cagtctacta
     4981 aatctcctgc agtgacacct ggcagaggca gaggtcgggg acgtggtcgg ggtcgaggta
     5041 gaggccgtgg tgaaataatt gattctgaag ttgttcccca acgcaggggt cagatgctgc
     5101 ataatgtggt attagctatt cccaataatc aaacttctcc agttggcaag ccagaaacag
     5161 attccccagt gggtccctct actgcttctg aaataggcaa caagtcttcg gtttccgtct
     5221 ccactaatat aaatgctatc aatagcacac cagctactgc ttctgaaaca ggcaaaaagt
     5281 cttcggtttc tgccaccact aatataaatg ctcagagtag cacaccagtt actgcttctg
     5341 aaacaggcaa cgagtccttg gtttctgtct ccactaatat aaatactgtc agtagcacac
     5401 cagttatagg ggtagctgat actcctgtac aaaaagtatc cccttctgaa acctccactg
     5461 ctgatatcgc atcaccaaaa acaccagtcc ctactgcacc tgtcgctaca tcttctacgt
     5521 tgacagacac cggtagtacc atggtgggga ccacacagac acctgtttcc gtttctgtag
     5581 gttctcagtt cactgagctt ggaacaataa gtcctcagac agctacacca cctgtatcta
     5641 ctccgattgg cgctgattct gcaactccta atcctgtatc aaagcaaggt cgaggacgcg
     5701 gaagaaaggc ggctgagagt gggttagggt cacctcgcct cacgcgaagg aagaaaaagg
     5761 atttggtaga agctcaggag aaaacatcta atgaaccagt acagaagaaa acacgagtat
     5821 cttctggtag aaaaaccgta gctacaagaa gtatgctacg aaatgaagct cagaaaggga
     5881 aagatcaacc tatcctaaca gatgaccatt ccggcaaagg taataagttg ggtcaatcgt
     5941 cagaattaag caagtttgcc gatgcaagta cagtagacaa tagcttaagt acccaagagg
     6001 agaaggttga agagccaaaa ggtattgcag tggccactga gtcagtttca aagattcgtg
     6061 atgctggtaa agataccaag cctgacgaat tggatcccaa gacatcaatt aatatggaga
     6121 agggaacaga gtccaaatca gagacgctgg aggggaaagg gtccaaaccc tctaaagaag
     6181 ttgagaagtt gtcccacact gaggatactt tagccacaaa agttgatctc aaggaagaga
     6241 ctgagcaaga ggaactagca atagcttgca ctgcttcaga agatgctaac aaagataata
     6301 aaactgaagt tatcgtgtct gaaagcgaat gtcctgtcaa aaaggtatcc aagactgaag
     6361 aaaacaatcc tataatcatt ggagagaccc tggaggctga cactgctgaa ggagccattg
     6421 aagataatgt agttgaagtt gttcaaaagc gtaagaccgt gaatacttac attattggag
     6481 acttacaggt ggaaactgaa gctgcctctt caaaaagcac cgatgagatc tcccataaag
     6541 aatctgagtt taaggagaag gatcaaggag ctgaagatcc cataagggaa gatgtggttg
     6601 ataccatcaa gacatcgtta gagctttctg ttacacaggg cgagggagat gatcctgcaa
     6661 atgttgaagg aagcagtgta gttgaaagag atgctaaatc atctgacgat gtagtggaaa
     6721 caagtggtgt gtcagatgac gttgaaaaag ctgtagttga ggatgagaat acaacagatg
     6781 atccccctgt taaagaagtt gaagatgcct gtcaaggaga aactgagaat gagaaattgg
     6841 gagatgttag ttccattgca gaaaatgtag ttgacgtgga gacaatacat gctcctcccg
     6901 tcagtgtgga tgaaatggaa ggtgttgaaa caagtgtttc agaatctcca ttagacacag
     6961 gtgtcaaacc ttttgaaaaa gctgatgctg cctccttggt ggatacgggt aaacaagaaa
     7021 ttgaccacag tgacagagat acggtgatgg agatagatga caaatcctct caaaagttgg
     7081 agaaccctga aagtgaggaa tcagtaaaag tacttcctga tgtacaggag acaattgagg
     7141 tttctgaaac cactgatggt gctatgcctg tgaacacgga agtcacccct tttgaagaga
     7201 acaataatga aatgccggga gagtctgtta ttggtgctga acagagtaca gattctcttc
     7261 ctcttcaaga ggatgaaaac ggcggccttg atgttgacaa agagaatctc ggtgaggcaa
     7321 taactgagca ggggcaacaa gcgacagagt gcaatgcttc aggagatact ggcaaggata
     7381 ataggactga aatgatgctt gaaaatgatg gtcccgttga aaagaagact gaagaagacg
     7441 atgttgcgct cattgatgga gacaccctgg aagccgaccc tgctgaagga gttgcgattg
     7501 aagaaaatgt agtcgagatt gttcagaggg catcaagtcc tgttctgcag cgtacaactg
     7561 agagttcagg gattattgat gacttacccg tggaagcaga aactacttcg tcaaaaagga
     7621 ccgaagaaat ctcccatgca gaaatggagt acaaggagaa ggttcaagaa gctaatgatc
     7681 tcataatgga agatgtagtt aataccaaca agacatcgat tgagctttcc attgcacagg
     7741 ttaaggttga gagaaatgat gttgcaactg ttgaagtaag caacattgtt gatgctaaat
     7801 cctctgatga tgtagtggaa gcaattggcg tgtcgggtga ccttggaaag gatgtatctg
     7861 gtgagaagac agcagatgat ccccatgtta aagagggtga agcggaagtc tttgaaacat
     7921 ttaatgcagg atccccgctc gacactggtg tcgaatcatc taaaaaagct gatgacgtct
     7981 ccatggtgga aacggaaaaa caagaaaatg atagcattga gagaggcaca ctgatggaga
     8041 tggatgacaa atcctctgaa aagttggagg atagtgcagg ttgcgctgag aaggatattc
     8101 aactacctga tgcacaggat gaaacaggca ctctagatgc caacaaagag attctcaatg
     8161 acgcagaacc aaaacccgtt gaaatagtga acaaaggcat ccaagtggta gctgaaagtg
     8221 agaatctaaa aggatgtgct gacgcattag aagtcaaatg gaaggatctt catgttggcc
     8281 aggttgatgg aagaagtgct gaaaccatca atgcagaatc cctggataat acacaggccg
     8341 agtcgtccaa taaattagac ggaccctgtg aggacaaaag tttgcataac gaaaaagatc
     8401 acaaacctcc agctgagatc gttgagtcaa caaaggatct ttctgtttca gaagtcgctg
     8461 cacaaaaaaa tgtggaagaa agagagatta aaccttctaa aatagggtct gatgtttcta
     8521 cagaccaaga actagatgac tcaacaaatg agcttatcgt ttcagaagtt gcttcacaaa
     8581 gccccatgga agaaaacgaa acggaacctt ctaaaacagg aattgacgtc tcaacaatta
     8641 aaggaattac agggaccgat gcttcaacat ctatagaaga aaaggagtca gctaaagagc
     8701 tctctgtttc agaagttgct tcacaaagcc acaaggaaga aaaggagacc gaaccttcta
     8761 aaacagatga tgattcgact gtcttggaac atgcaactgt caaggaccaa gatatcagtg
     8821 aagaaatctt gagcagtgat gttggagtgc ctgatcagta ggctaaatat ttaaacaaac
     8881 agaacattag ccgtaattat ggtttagctt gtatggttgt agctatgtaa caaatattga
     8941 aactgctctt atatgcttaa gctgatgtgt taattattgg ttttaccatc ttatagaggt
     9001 atccatgtct cttaaacatg gtaaaatatg atatgtaagt gatgtggtat gaaaacttga
     9061 ggaacaagta aaagggttta cttgaaaagc aagcaagtaa tttgctggaa tatttttatt
     9121 agaaaagttt taattatttg ttttaggaaa cttaattagg tcttatgtgc ctatatatag
     9181 gaattaggat atatgtttat gttattttca ttcaattttt aagtcaataa agttctgtgt
     9241 tcttgtttac tcttca
//
LOCUS       XM_071829730            9303 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839616), transcript variant X3, mRNA.
ACCESSION   XM_071829730
VERSION     XM_071829730.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9303
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9303
                     /gene="LOC139839616"
                     /note="uncharacterized LOC139839616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839616"
     CDS             134..8908
                     /gene="LOC139839616"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685831.1"
                     /db_xref="GeneID:139839616"
                     /translation="MAATPQNVEMEAAKFLHKLIQESTDEPTKLATKLHVILQHMRTS
                     GKENSMPYQVISRAMETVIKRHGLDIDALMSSRQALTSGPLVGDSSISQSAGTKRSCP
                     SQHTTVENDSTKPIKTEDTSNAAVYSSKSLHGSGTTGHDAYQGSVNQHNSMKTVGSVA
                     GFSASYESTDPGNAAALALKGPAGKALDHEAGFSNVMASASKTLQGASSNSAAEMGVL
                     QNEALRDTGKLPVLQAPPVGPSMPFKEHHLKQLRAQCLVFLAFRNNMMPKKLHLEIAL
                     GNVFPKEDIKEHNHQKGKEQSVGPGFSNTGFVSETNLLKEAEKFDKINDKNDLPAGLP
                     EHNINSRKIEADMQAFEAKESQMPVTKVAQLDPNNIARHAGLFAMPDSQVNRHGQGHL
                     QGFPMNERHMVPKIANVLEKDVILGNNNGGDDNSELSSSPALPKYTTSEKLIADCLKR
                     KAAADSNWAVKKQKTEQRILARVEKLKEAVSSSEDISAKTKSVIELKKLELLNLQRRL
                     RNEILNDFFRPTSNEIDRLKNIKKHRIGRRSKQIERHEQKMKEERQKRIRERQKDFFG
                     EMEQHRERLEDVFKNRRERVKGFNKYAREFHKRKERLHREKIDRIQREKINLLKINDV
                     EGYLRMVQDAKSDRVRQLLKETEKYLQKLGSKLKEAKVINRCFETDMSGVNDSGEFTI
                     ENEDETDQAKHYMESNEKYYLMAHSIKETVAVQPSNLIGGKLREYQMNGLRWLLSLYN
                     NHLNGILADEMGLGKTVQVISLLCYLMENKNDRGPFLVVVPSSVLPGWESEINFWAPS
                     INKIVYSGPPEERRKLFKERIVQQKFNVLLTTYEYLMNKHDRPKLSKIHWHYVIIDEG
                     HRIKNASCKLNAELKHYHSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQW
                     FNKPFESNADNSLEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLV
                     RCEASAYQKLLMQRVDDSLGAFGATKARAVHNSVVELRNICNHPYLSQLHNEEVHEFI
                     PKHYLPNIIRFCGKLEMLDRLLPKLKATDHRILLFSTMTRLLDVMEDYLYWKQYRYLR
                     LDGHTSGGDRGALIDEFNRPGSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVD
                     LQAQARAHRIGQKKEVLVLRLETVKSVEEQVRASAEHKLGVANQSITAGFFDNNTSAE
                     DRREYLEALLRECKKEEAAPVLNDDALNNIIARSESEIDVFEEIDIKRQEEELSVWKK
                     LLVEQGGTSTEATPPLPPRLVTESELKSFCEAMKAIEVPKPVVVPGIGGKRSRELGNL
                     DIQHYGRGKRAREVRSYEEQWTEDEFDKLCQAENLSPPIHKEELKEQDLPVAKNESAT
                     VSATEAAVLPNVQPMQPLDRSVQQHKEINPPLKRGRGRPKKKPSGMSSTPIGYPASSI
                     PISSTPKSVPPTVQPLGVQTAPGSQLNITSPSGSKSTSSDTLTSANTNETMTVPPGFQ
                     PVTDHPPGFHPTADHDHPPGFQPTVDHPPGFESLTVPPPGFKPIISPQQITPPPPGFE
                     PKMASPPPMAGSQSTPTVPAAPLPTSTLNSPSSHSIAASHSTSTSKADLPPGTLSSPT
                     LPSGPVSEPVVPPTSSDSQSTKSPAVTPGRGRGRGRGRGRGRGRGEIIDSEVVPQRRG
                     QMLHNVVLAIPNNQTSPVGKPETDSPVGPSTASEIGNKSSVSVSTNINAINSTPATAS
                     ETGKKSSVSATTNINAQSSTPVTASETGNESLVSVSTNINTVSSTPVIGVADTPVQKV
                     SPSETSTADIASPKTPVPTAPVATSSTLTDTGSTMVGTTQTPVSVSVGSQFTELGTIS
                     PQTATPPVSTPIGADSATPNPVSKQGRGRGRKAAESGLGSPRLTRRKKKDLVEAQEKT
                     SNEPVQKKTRVSSGRKTVATRSMLRNEAQKGKDQPILTDDHSGKGNKLGQSSELSKFA
                     DASTVDNSLSTQEEKVEEPKGIAVATESVSKIRDAGKDTKPDELDPKTSINMEKGTES
                     KSETLEGKGSKPSKEVEKLSHTEDTLATKVDLKEETEQEELAIACTASEDANKDNKTE
                     VIVSESECPVKKVSKTEENNPIIIGETLEADTAEGAIEDNVVEVVQKRKTVNTYIIGD
                     LQVETEAASSKSTDEISHKESEFKEKDQGAEDPIREDVVDTIKTSLELSVTQGEGDDP
                     ANVEGSSVVERDAKSSDDVVETSGVSDDVEKAVVEDENTTDDPPVKEVEDACQGETEN
                     EKLGDVSSIAENVVDVETIHAPPVSVDEMEGVETSVSESPLDTGVKPFEKADAASLVD
                     TGKQEIDHSDRDTVMEIDDKSSQKLENPESEESVKVLPDVQETIEVSETTDGAMPVNT
                     EVTPFEENNNEMPGESVIGAEQSTDSLPLQEDENGGLDVDKENLGEAITEQGQQATEC
                     NASGDTGKDNRTEMMLENDGPVEKKTEEDDVALIDGDTLEADPAEGVAIEENVVEIVQ
                     RASSPVLQRTTESSGIIDDLPVEAETTSSKRTEEISHAEMEYKEKVQEANDLIMEDVV
                     NTNKTSIELSIAQVKVERNDVATVEVSNIVDAKSSDDVVEAIGVSGDLGKDVSGEKTA
                     DDPHVKEGEAEVFETFNAGSPLDTGVESSKKADDVSMVETEKQENDSIERGTLMEMDD
                     KSSEKLEDSAGCAEKDIQLPDAQDETGTLDANKEILNDAEPKPVEIVNKGIQVVAESE
                     NLKGCADALEVKWKDLHVGQVDGRSAETINAESLDNTQAESSNKLDGPCEDKSLHNEK
                     DHKPPAEIVESTKDLSVSEVAAQKNVEEREIKPSKIGSDVSTDQELDDSTNELIVSEV
                     ASQSPMEENETEPSKTGIDVSTIKGITGTDASTSIEEKESAKELSVSEVASQSHKEEK
                     ETEPSKTDDDSTVLEHATVKDQDISEEILSSDVGVPDQ"
     misc_feature    1697..>2116
                     /gene="LOC139839616"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:464007"
     misc_feature    1910..>4237
                     /gene="LOC139839616"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    <4256..4864
                     /gene="LOC139839616"
                     /note="Sine oculis-binding protein; Region: SOBP;
                     pfam15279"
                     /db_xref="CDD:464609"
     misc_feature    <4634..5794
                     /gene="LOC139839616"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    6080..8827
                     /gene="LOC139839616"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     polyA_site      9303
                     /gene="LOC139839616"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagtcatat gaaatctgca tctatacgtt tcacataaag tgagcaatcc acttcattag
       61 gtagttctca gagcaaatat cgtgattcgt gatcctaatt aaagtagtga agtagtaata
      121 ctagtaaata aatatggcgg caactcccca aaatgttgag atggaagcag caaagttttt
      181 gcataagctt attcaggaat ctactgatga accgacgaaa ttggctacaa aattacacgt
      241 gattttgcag cacatgagaa ccagtggaaa ggagaattca atgccatacc aagttatatc
      301 aagggctatg gagacagtca taaaaagaca cggtcttgat atagatgctt taatgtcttc
      361 acgacaagca ttgactagcg gacctttagt cggagattca tccatatccc aatctgcagg
      421 tacaaaaaga tcatgtcctt cacagcatac cactgtggaa aatgattcca caaaacctat
      481 aaaaacggag gacacatcaa atgctgcagt ctattcaagc aaatccctgc atggttctgg
      541 tactacaggg catgacgctt atcagggatc tgtaaatcaa cacaactcta tgaagactgt
      601 tggatctgtt gccggttttt ctgcttcata tgaatctacg gaccctggaa acgctgcagc
      661 attggcgctt aaaggcccgg ctggtaaggc attggaccat gaagctgggt tctcaaatgt
      721 gatggcaagt gcaagtaaga cacttcaggg tgctagctcg aacagtgctg ctgaaatggg
      781 agtgcttcaa aatgaagctt taagagatac tggaaagttg ccggtgttgc aggcaccgcc
      841 agttggacct tccatgcctt ttaaggaaca tcatttaaag cagcttagag cacaatgtct
      901 tgtatttttg gccttcagga acaatatgat gccaaaaaag ttgcatcttg agattgccct
      961 aggaaatgtc tttcccaagg aagatattaa ggaacataat catcagaagg ggaaggagca
     1021 atctgttggt cctggtttct ccaacaccgg atttgtttca gaaacaaacc tattaaaaga
     1081 agccgagaaa tttgacaaga tcaatgataa aaatgaccta cccgctggtc ttcctgaaca
     1141 taatatcaat tcaaggaaga ttgaggcaga catgcaagct tttgaggcaa aagaatcgca
     1201 gatgcctgta actaaagtag cacagttaga tccaaataat attgcacgac acgctggcct
     1261 atttgctatg cctgatagcc aagtgaaccg gcatggtcag ggtcatttgc aaggttttcc
     1321 tatgaatgaa aggcacatgg tcccgaagat tgctaatgtt cttgaaaagg atgtaatact
     1381 tggaaacaat aatgggggag atgataattc tgaactaagt tcttcaccag cattgccaaa
     1441 gtatactaca tctgaaaagt tgattgcaga ttgcctaaag aggaaagctg ctgctgattc
     1501 taactgggct gtcaaaaagc agaaaacaga gcagaggatc ttggctcgtg ttgagaagtt
     1561 aaaggaagca gtcagctctt ctgaagacat atcagcaaaa accaagagtg tcattgagct
     1621 aaaaaaactt gaactcctaa atctccaacg tcgcctacgg aatgagatcc tgaatgactt
     1681 ctttagacct acatctaatg agattgatcg ccttaaaaat atcaaaaaac ataggattgg
     1741 tcgacgatca aagcaaatag agaggcatga gcagaaaatg aaagaagagc gtcaaaagag
     1801 aattcgagaa cgacagaagg acttctttgg tgaaatggaa caacacaggg aaaggctgga
     1861 agatgtattt aaaaatagga gagaacgagt gaaagggttt aacaagtatg caagagagtt
     1921 tcataaaagg aaggaaagac ttcataggga gaagattgat agaattcagc gggaaaagat
     1981 taatcttttg aaaattaatg acgttgaggg ttatcttcga atggttcagg atgcaaagtc
     2041 ggatcgagtg aggcaactat tgaaagagac tgagaagtat cttcagaagc ttggatctaa
     2101 gctgaaagag gcaaaggtta taaacagatg ctttgagact gatatgagtg gtgtaaatga
     2161 cagtggtgaa tttacaattg agaatgaaga tgaaactgac caggcgaagc attatatgga
     2221 gagcaatgag aagtactatc taatggctca tagcatcaaa gagactgtag cagtgcagcc
     2281 atcaaatctt attggtggaa aattgagaga gtaccaaatg aatggattac gatggctact
     2341 gtcactgtac aacaatcatt tgaatggcat tcttgcagat gagatgggcc tagggaaaac
     2401 tgttcaggtt atttctctac tatgttatct gatggaaaat aaaaatgata gagggccatt
     2461 tttggtggtt gtgccatcct cagttctgcc tggatgggag tcggagatta acttctgggc
     2521 ccctagcatc aacaaaattg tctactctgg tcctcctgag gagcgtcgga aattatttaa
     2581 ggagagaatt gttcagcaaa agttcaatgt tctattgaca acgtacgagt atctcatgaa
     2641 caaacatgac agaccaaagc tgagcaaaat acattggcat tatgtcatta ttgatgaagg
     2701 tcatcgtata aagaatgctt cgtgcaagct caatgctgaa ttgaagcatt atcatagttc
     2761 ccatagattg cttttgactg gaactccttt gcagaataat cttgaggaac tatgggcact
     2821 tcttaacttt ctattgccaa atatttttaa ttcgtcagag gatttttccc aatggttcaa
     2881 caaaccattt gaaagtaatg cagacaactc acttgaagag gctttgctct ctgaggagga
     2941 aaatctatta attataaacc gtcttcacca agttttgcgc ccatttgtgc ttagaagact
     3001 gaaacacaag gttgagaatg agctacctga aaagatagaa agacttgtaa gatgtgaggc
     3061 ttctgcatat caaaagctat tgatgcagag ggtagatgac agtcttggtg catttggtgc
     3121 tacaaaggct cgagcagtgc acaattctgt cgttgaatta cgaaatattt gcaatcatcc
     3181 gtaccttagc cagcttcata atgaagaggt tcatgaattc attccaaagc attatcttcc
     3241 aaatattata aggttttgtg ggaagcttga gatgttagat agactgttgc ccaagctaaa
     3301 agctacagat catcggatac ttctcttctc aacgatgacc cggctccttg atgttatgga
     3361 ggattatttg tattggaaac agtatcggta ccttcgttta gatggacaca catctggagg
     3421 tgaccgtggg gcattaattg atgagttcaa cagaccagga tcgccatatt tcatattcct
     3481 actcagtata cgtgctggtg gtgttggagt taatcttcaa gctgcggata cagtcattat
     3541 ttttgacaca gattggaatc cacaggttga cctgcaagca caggctaggg ctcacaggat
     3601 aggtcagaag aaggaagtac tcgttcttcg gttagaaact gttaaatcgg tagaggagca
     3661 agttcgagct tcagctgagc acaaacttgg agttgctaat cagagcatta ctgctgggtt
     3721 ttttgacaat aacacaagtg cggaagaccg aagagaatac ttggaggctc tgctgcgtga
     3781 gtgtaagaaa gaggaagcgg ctcctgtctt aaatgatgat gctctcaata atatcatagc
     3841 caggagtgag tctgaaattg acgtatttga ggaaattgat ataaaacggc aagaagagga
     3901 gctgtctgta tggaaaaagt tgttagttga gcaaggggga acaagtacag aagccacacc
     3961 tccccttcct cctaggcttg tgacggaaag tgaattgaag tcattctgtg aagctatgaa
     4021 ggcaattgaa gttcctaaac ctgtagttgt cccaggtatc ggaggtaaaa ggagtagaga
     4081 gcttgggaac ttagatattc aacattatgg aaggggaaag cgtgcacgag aggtgcgttc
     4141 ttatgaggag caatggacgg aagacgaatt tgataagcta tgtcaagctg aaaatctcag
     4201 ccctcctatc cacaaggaag aactaaaaga acaggatttg cccgttgcca aaaatgaatc
     4261 tgccacggtc agtgctacag aagctgcagt gttgccaaac gtacagccaa tgcaaccttt
     4321 ggatcgcagc gttcaacagc acaaggagat aaatccccca ttaaaacggg gtcgtggtag
     4381 gcctaaaaag aaaccatcag ggatgtcttc aactccaatt ggttatccag catcttcaat
     4441 acctatctct tctactccta aaagtgttcc tccaactgtc caaccgttgg gtgtacaaac
     4501 ggctcctggt tctcagttga atattaccag cccttctggt tccaagtcaa cttcctctga
     4561 tacattgaca tctgctaata ctaatgagac catgactgtg cctcctggtt ttcagccagt
     4621 tacagatcat cctcctggtt ttcatccaac tgcagatcat gatcatcctc ctggttttca
     4681 gccaactgta gatcatcctc ctggttttga atcgttgacc gttccccctc caggctttaa
     4741 gcccattatc tctcctcagc agataacccc tccaccccct ggattcgaac cgaagatggc
     4801 atcaccccct cccatggcag gttctcagtc aacccctact gtccctgctg cacccttacc
     4861 aaccagcacc ttgaattctc ccagttctca ttcgattgcc gcatctcatt ctacctctac
     4921 atccaaggca gatctccctc ctggcactct atcaagccct actttacctt cgggtcccgt
     4981 ttcagagcca gtggtccccc caacctcatc cgattcccag tctactaaat ctcctgcagt
     5041 gacacctggc agaggcagag gtcggggacg tggtcggggt cgaggtagag gccgtggtga
     5101 aataattgat tctgaagttg ttccccaacg caggggtcag atgctgcata atgtggtatt
     5161 agctattccc aataatcaaa cttctccagt tggcaagcca gaaacagatt ccccagtggg
     5221 tccctctact gcttctgaaa taggcaacaa gtcttcggtt tccgtctcca ctaatataaa
     5281 tgctatcaat agcacaccag ctactgcttc tgaaacaggc aaaaagtctt cggtttctgc
     5341 caccactaat ataaatgctc agagtagcac accagttact gcttctgaaa caggcaacga
     5401 gtccttggtt tctgtctcca ctaatataaa tactgtcagt agcacaccag ttataggggt
     5461 agctgatact cctgtacaaa aagtatcccc ttctgaaacc tccactgctg atatcgcatc
     5521 accaaaaaca ccagtcccta ctgcacctgt cgctacatct tctacgttga cagacaccgg
     5581 tagtaccatg gtggggacca cacagacacc tgtttccgtt tctgtaggtt ctcagttcac
     5641 tgagcttgga acaataagtc ctcagacagc tacaccacct gtatctactc cgattggcgc
     5701 tgattctgca actcctaatc ctgtatcaaa gcaaggtcga ggacgcggaa gaaaggcggc
     5761 tgagagtggg ttagggtcac ctcgcctcac gcgaaggaag aaaaaggatt tggtagaagc
     5821 tcaggagaaa acatctaatg aaccagtaca gaagaaaaca cgagtatctt ctggtagaaa
     5881 aaccgtagct acaagaagta tgctacgaaa tgaagctcag aaagggaaag atcaacctat
     5941 cctaacagat gaccattccg gcaaaggtaa taagttgggt caatcgtcag aattaagcaa
     6001 gtttgccgat gcaagtacag tagacaatag cttaagtacc caagaggaga aggttgaaga
     6061 gccaaaaggt attgcagtgg ccactgagtc agtttcaaag attcgtgatg ctggtaaaga
     6121 taccaagcct gacgaattgg atcccaagac atcaattaat atggagaagg gaacagagtc
     6181 caaatcagag acgctggagg ggaaagggtc caaaccctct aaagaagttg agaagttgtc
     6241 ccacactgag gatactttag ccacaaaagt tgatctcaag gaagagactg agcaagagga
     6301 actagcaata gcttgcactg cttcagaaga tgctaacaaa gataataaaa ctgaagttat
     6361 cgtgtctgaa agcgaatgtc ctgtcaaaaa ggtatccaag actgaagaaa acaatcctat
     6421 aatcattgga gagaccctgg aggctgacac tgctgaagga gccattgaag ataatgtagt
     6481 tgaagttgtt caaaagcgta agaccgtgaa tacttacatt attggagact tacaggtgga
     6541 aactgaagct gcctcttcaa aaagcaccga tgagatctcc cataaagaat ctgagtttaa
     6601 ggagaaggat caaggagctg aagatcccat aagggaagat gtggttgata ccatcaagac
     6661 atcgttagag ctttctgtta cacagggcga gggagatgat cctgcaaatg ttgaaggaag
     6721 cagtgtagtt gaaagagatg ctaaatcatc tgacgatgta gtggaaacaa gtggtgtgtc
     6781 agatgacgtt gaaaaagctg tagttgagga tgagaataca acagatgatc cccctgttaa
     6841 agaagttgaa gatgcctgtc aaggagaaac tgagaatgag aaattgggag atgttagttc
     6901 cattgcagaa aatgtagttg acgtggagac aatacatgct cctcccgtca gtgtggatga
     6961 aatggaaggt gttgaaacaa gtgtttcaga atctccatta gacacaggtg tcaaaccttt
     7021 tgaaaaagct gatgctgcct ccttggtgga tacgggtaaa caagaaattg accacagtga
     7081 cagagatacg gtgatggaga tagatgacaa atcctctcaa aagttggaga accctgaaag
     7141 tgaggaatca gtaaaagtac ttcctgatgt acaggagaca attgaggttt ctgaaaccac
     7201 tgatggtgct atgcctgtga acacggaagt cacccctttt gaagagaaca ataatgaaat
     7261 gccgggagag tctgttattg gtgctgaaca gagtacagat tctcttcctc ttcaagagga
     7321 tgaaaacggc ggccttgatg ttgacaaaga gaatctcggt gaggcaataa ctgagcaggg
     7381 gcaacaagcg acagagtgca atgcttcagg agatactggc aaggataata ggactgaaat
     7441 gatgcttgaa aatgatggtc ccgttgaaaa gaagactgaa gaagacgatg ttgcgctcat
     7501 tgatggagac accctggaag ccgaccctgc tgaaggagtt gcgattgaag aaaatgtagt
     7561 cgagattgtt cagagggcat caagtcctgt tctgcagcgt acaactgaga gttcagggat
     7621 tattgatgac ttacccgtgg aagcagaaac tacttcgtca aaaaggaccg aagaaatctc
     7681 ccatgcagaa atggagtaca aggagaaggt tcaagaagct aatgatctca taatggaaga
     7741 tgtagttaat accaacaaga catcgattga gctttccatt gcacaggtta aggttgagag
     7801 aaatgatgtt gcaactgttg aagtaagcaa cattgttgat gctaaatcct ctgatgatgt
     7861 agtggaagca attggcgtgt cgggtgacct tggaaaggat gtatctggtg agaagacagc
     7921 agatgatccc catgttaaag agggtgaagc ggaagtcttt gaaacattta atgcaggatc
     7981 cccgctcgac actggtgtcg aatcatctaa aaaagctgat gacgtctcca tggtggaaac
     8041 ggaaaaacaa gaaaatgata gcattgagag aggcacactg atggagatgg atgacaaatc
     8101 ctctgaaaag ttggaggata gtgcaggttg cgctgagaag gatattcaac tacctgatgc
     8161 acaggatgaa acaggcactc tagatgccaa caaagagatt ctcaatgacg cagaaccaaa
     8221 acccgttgaa atagtgaaca aaggcatcca agtggtagct gaaagtgaga atctaaaagg
     8281 atgtgctgac gcattagaag tcaaatggaa ggatcttcat gttggccagg ttgatggaag
     8341 aagtgctgaa accatcaatg cagaatccct ggataataca caggccgagt cgtccaataa
     8401 attagacgga ccctgtgagg acaaaagttt gcataacgaa aaagatcaca aacctccagc
     8461 tgagatcgtt gagtcaacaa aggatctttc tgtttcagaa gtcgctgcac aaaaaaatgt
     8521 ggaagaaaga gagattaaac cttctaaaat agggtctgat gtttctacag accaagaact
     8581 agatgactca acaaatgagc ttatcgtttc agaagttgct tcacaaagcc ccatggaaga
     8641 aaacgaaacg gaaccttcta aaacaggaat tgacgtctca acaattaaag gaattacagg
     8701 gaccgatgct tcaacatcta tagaagaaaa ggagtcagct aaagagctct ctgtttcaga
     8761 agttgcttca caaagccaca aggaagaaaa ggagaccgaa ccttctaaaa cagatgatga
     8821 ttcgactgtc ttggaacatg caactgtcaa ggaccaagat atcagtgaag aaatcttgag
     8881 cagtgatgtt ggagtgcctg atcagtaggc taaatattta aacaaacaga acattagccg
     8941 taattatggt ttagcttgta tggttgtagc tatgtaacaa atattgaaac tgctcttata
     9001 tgcttaagct gatgtgttaa ttattggttt taccatctta tagaggtatc catgtctctt
     9061 aaacatggta aaatatgata tgtaagtgat gtggtatgaa aacttgagga acaagtaaaa
     9121 gggtttactt gaaaagcaag caagtaattt gctggaatat ttttattaga aaagttttaa
     9181 ttatttgttt taggaaactt aattaggtct tatgtgccta tatataggaa ttaggatata
     9241 tgtttatgtt attttcattc aatttttaag tcaataaagt tctgtgttct tgtttactct
     9301 tca
//
LOCUS       XM_071829731            9300 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839616), transcript variant X4, mRNA.
ACCESSION   XM_071829731
VERSION     XM_071829731.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9300
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9300
                     /gene="LOC139839616"
                     /note="uncharacterized LOC139839616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839616"
     CDS             134..8905
                     /gene="LOC139839616"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071685832.1"
                     /db_xref="GeneID:139839616"
                     /translation="MAATPQNVEMEAAKFLHKLIQESTDEPTKLATKLHVILQHMRTS
                     GKENSMPYQVISRAMETVIKRHGLDIDALMSSRQALTSGPLVGDSSISQSAGTKRSCP
                     SQHTTVENDSTKPIKTEDTSNAAVYSSKSLHGSGTTGHDAYQGSVNQHNSMKTVGSVA
                     GFSASYESTDPGNAAALALKGPAGKALDHEAGFSNVMASASKTLQGASSNSAAEMGVL
                     QNEALRDTGKLPVLQAPPVGPSMPFKEHHLKQLRAQCLVFLAFRNNMMPKKLHLEIAL
                     GNVFPKEDIKEHNHQKGKEQSVGPGFSNTGFVSETNLLKEAEKFDKINDKNDLPAGLP
                     EHNINSRKIEADMQAFEAKESQMPVTKVAQLDPNNIARHAGLFAMPDSQVNRHGQGHL
                     QGFPMNERHMVPKIANVLEKDVILAGNNNGGDDNSELSSSPALPKYTTSEKLIADCLK
                     RKAAADSNWAVKKQKTEQRILARVEKLKEAVSSSEDISAKTKSVIELKKLELLNLQRR
                     LRNEILNDFFRPTSNEIDRLKNIKKHRIGRRSKQIERHEQKMKEERQKRIRERQKDFF
                     GEMEQHRERLEDVFKNRRERVKGFNKYAREFHKRKERLHREKIDRIQREKINLLKIND
                     VEGYLRMVQDAKSDRVRQLLKETEKYLQKLGSKLKEAKVINRCFETDMSGVNDSGEFT
                     IENEDETDQAKHYMESNEKYYLMAHSIKETVAVQPSNLIGGKLREYQMNGLRWLLSLY
                     NNHLNGILADEMGLGKTVQVISLLCYLMENKNDRGPFLVVVPSSVLPGWESEINFWAP
                     SINKIVYSGPPEERRKLFKERIVQQKFNVLLTTYEYLMNKHDRPKLSKIHWHYVIIDE
                     GHRIKNASCKLNAELKHYHSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQ
                     WFNKPFESNADNSLEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERL
                     VRCEASAYQKLLMQRVDDSLGAFGATKARAVHNSVVELRNICNHPYLSQLHNEEVHEF
                     IPKHYLPNIIRFCGKLEMLDRLLPKLKATDHRILLFSTMTRLLDVMEDYLYWKQYRYL
                     RLDGHTSGGDRGALIDEFNRPGSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV
                     DLQAQARAHRIGQKKEVLVLRLETVKSVEEQVRASAEHKLGVANQSITAGFFDNNTSA
                     EDRREYLEALLRECKKEEAAPVLNDDALNNIIARSESEIDVFEEIDIKRQEEELSVWK
                     KLLVEQGGTSTEATPPLPPRLVTESELKSFCEAMKAIEVPKPVVVPGIGGKRSRELGN
                     LDIQHYGRGKRAREVRSYEEQWTEDEFDKLCQAENLSPPIHKEELKEQDLPVAKNESA
                     TVSATEAAVLPNVQPMQPLDRSVQQHKEINPPLKRGRGRPKKKPSGMSSTPIGYPASS
                     IPISSTPKSVPPTVQPLGVQTAPGSQLNITSPSGSKSTSSDTLTSANTNETMTVPPGF
                     QPVTDHPPGFHPTADHDHPPGFQPTVDHPPGFESLTVPPPGFKPIISPQQITPPPPGF
                     EPKMASPPPMAGSQSTPTVPAAPLPTSTLNSPSSHSIAASHSTSTSKADLPPGTLSSP
                     TLPSGPVSEPVVPPTSSDSQSTKSPAVTPGRGRGRGRGRGRGRGRGEIIDSEVVPQRR
                     GQMLHNVVLAIPNNQTSPVGKPETDSPVGPSTASEIGNKSSVSVSTNINAINSTPATA
                     SETGKKSSVSATTNINAQSSTPVTASETGNESLVSVSTNINTVSSTPVIGVADTPVQK
                     VSPSETSTADIASPKTPVPTAPVATSSTLTDTGSTMVGTTQTPVSVSVGSQFTELGTI
                     SPQTATPPVSTPIGADSATPNPVSKQGRGRGRKAAESGLGSPRLTRRKKKDLVEAQEK
                     TSNEPVQKKTRVSSGRKTVATRSMLRNEAQKGKDQPILTDDHSGKGNKLGQSSELSKF
                     ADASTVDNSLSTQEEKVEEPKGIAVATESVSKIRDAGKDTKPDELDPKTSINMEKGTE
                     SKSETLEGKGSKPSKEVEKLSHTEDTLATKVDLKEETEQEELAIACTASEDANKDNKT
                     EVIVSESECPVKKVSKTEENNPIIIGETLEADTAEGAIEDNVVEVVQKRKTVNTYIIG
                     DLQVETEAASSKSTDEISHKESEFKEKDQGAEDPIREDVVDTIKTSLELSVTQGEGDD
                     PANVEGSSVVERDAKSSDDVVETSGVSDDVEKAVVEDENTTDDPPVKEVEDACQGETE
                     NEKLGDVSSIAENVVDVETIHAPPVSVDEMEGVETSVSESPLDTGVKPFEKADAASLV
                     DTGKQEIDHSDRDTVMEIDDKSSQKLENPESEESVKVLPDVQETIEVSETTDGAMPVN
                     TEVTPFEENNNEMPGESVIGAEQSTDSLPLQEDENGGLDVDKENLGEAITEQGQQATE
                     CNASGDTGKDNRTEMMLENDGPVEKKTEEDDVALIDGDTLEADPAEGVAIEENVVEIV
                     QRASSPVLQRTTESSGIIDDLPVEAETTSSKRTEEISHAEMEYKEKVQEANDLIMEDV
                     VNTNKTSIELSIAQVERNDVATVEVSNIVDAKSSDDVVEAIGVSGDLGKDVSGEKTAD
                     DPHVKEGEAEVFETFNAGSPLDTGVESSKKADDVSMVETEKQENDSIERGTLMEMDDK
                     SSEKLEDSAGCAEKDIQLPDAQDETGTLDANKEILNDAEPKPVEIVNKGIQVVAESEN
                     LKGCADALEVKWKDLHVGQVDGRSAETINAESLDNTQAESSNKLDGPCEDKSLHNEKD
                     HKPPAEIVESTKDLSVSEVAAQKNVEEREIKPSKIGSDVSTDQELDDSTNELIVSEVA
                     SQSPMEENETEPSKTGIDVSTIKGITGTDASTSIEEKESAKELSVSEVASQSHKEEKE
                     TEPSKTDDDSTVLEHATVKDQDISEEILSSDVGVPDQ"
     misc_feature    1700..>2119
                     /gene="LOC139839616"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:464007"
     misc_feature    1913..>4240
                     /gene="LOC139839616"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    <4259..4867
                     /gene="LOC139839616"
                     /note="Sine oculis-binding protein; Region: SOBP;
                     pfam15279"
                     /db_xref="CDD:464609"
     misc_feature    <4637..5797
                     /gene="LOC139839616"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    6083..8824
                     /gene="LOC139839616"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     polyA_site      9300
                     /gene="LOC139839616"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagtcatat gaaatctgca tctatacgtt tcacataaag tgagcaatcc acttcattag
       61 gtagttctca gagcaaatat cgtgattcgt gatcctaatt aaagtagtga agtagtaata
      121 ctagtaaata aatatggcgg caactcccca aaatgttgag atggaagcag caaagttttt
      181 gcataagctt attcaggaat ctactgatga accgacgaaa ttggctacaa aattacacgt
      241 gattttgcag cacatgagaa ccagtggaaa ggagaattca atgccatacc aagttatatc
      301 aagggctatg gagacagtca taaaaagaca cggtcttgat atagatgctt taatgtcttc
      361 acgacaagca ttgactagcg gacctttagt cggagattca tccatatccc aatctgcagg
      421 tacaaaaaga tcatgtcctt cacagcatac cactgtggaa aatgattcca caaaacctat
      481 aaaaacggag gacacatcaa atgctgcagt ctattcaagc aaatccctgc atggttctgg
      541 tactacaggg catgacgctt atcagggatc tgtaaatcaa cacaactcta tgaagactgt
      601 tggatctgtt gccggttttt ctgcttcata tgaatctacg gaccctggaa acgctgcagc
      661 attggcgctt aaaggcccgg ctggtaaggc attggaccat gaagctgggt tctcaaatgt
      721 gatggcaagt gcaagtaaga cacttcaggg tgctagctcg aacagtgctg ctgaaatggg
      781 agtgcttcaa aatgaagctt taagagatac tggaaagttg ccggtgttgc aggcaccgcc
      841 agttggacct tccatgcctt ttaaggaaca tcatttaaag cagcttagag cacaatgtct
      901 tgtatttttg gccttcagga acaatatgat gccaaaaaag ttgcatcttg agattgccct
      961 aggaaatgtc tttcccaagg aagatattaa ggaacataat catcagaagg ggaaggagca
     1021 atctgttggt cctggtttct ccaacaccgg atttgtttca gaaacaaacc tattaaaaga
     1081 agccgagaaa tttgacaaga tcaatgataa aaatgaccta cccgctggtc ttcctgaaca
     1141 taatatcaat tcaaggaaga ttgaggcaga catgcaagct tttgaggcaa aagaatcgca
     1201 gatgcctgta actaaagtag cacagttaga tccaaataat attgcacgac acgctggcct
     1261 atttgctatg cctgatagcc aagtgaaccg gcatggtcag ggtcatttgc aaggttttcc
     1321 tatgaatgaa aggcacatgg tcccgaagat tgctaatgtt cttgaaaagg atgtaatact
     1381 tgcaggaaac aataatgggg gagatgataa ttctgaacta agttcttcac cagcattgcc
     1441 aaagtatact acatctgaaa agttgattgc agattgccta aagaggaaag ctgctgctga
     1501 ttctaactgg gctgtcaaaa agcagaaaac agagcagagg atcttggctc gtgttgagaa
     1561 gttaaaggaa gcagtcagct cttctgaaga catatcagca aaaaccaaga gtgtcattga
     1621 gctaaaaaaa cttgaactcc taaatctcca acgtcgccta cggaatgaga tcctgaatga
     1681 cttctttaga cctacatcta atgagattga tcgccttaaa aatatcaaaa aacataggat
     1741 tggtcgacga tcaaagcaaa tagagaggca tgagcagaaa atgaaagaag agcgtcaaaa
     1801 gagaattcga gaacgacaga aggacttctt tggtgaaatg gaacaacaca gggaaaggct
     1861 ggaagatgta tttaaaaata ggagagaacg agtgaaaggg tttaacaagt atgcaagaga
     1921 gtttcataaa aggaaggaaa gacttcatag ggagaagatt gatagaattc agcgggaaaa
     1981 gattaatctt ttgaaaatta atgacgttga gggttatctt cgaatggttc aggatgcaaa
     2041 gtcggatcga gtgaggcaac tattgaaaga gactgagaag tatcttcaga agcttggatc
     2101 taagctgaaa gaggcaaagg ttataaacag atgctttgag actgatatga gtggtgtaaa
     2161 tgacagtggt gaatttacaa ttgagaatga agatgaaact gaccaggcga agcattatat
     2221 ggagagcaat gagaagtact atctaatggc tcatagcatc aaagagactg tagcagtgca
     2281 gccatcaaat cttattggtg gaaaattgag agagtaccaa atgaatggat tacgatggct
     2341 actgtcactg tacaacaatc atttgaatgg cattcttgca gatgagatgg gcctagggaa
     2401 aactgttcag gttatttctc tactatgtta tctgatggaa aataaaaatg atagagggcc
     2461 atttttggtg gttgtgccat cctcagttct gcctggatgg gagtcggaga ttaacttctg
     2521 ggcccctagc atcaacaaaa ttgtctactc tggtcctcct gaggagcgtc ggaaattatt
     2581 taaggagaga attgttcagc aaaagttcaa tgttctattg acaacgtacg agtatctcat
     2641 gaacaaacat gacagaccaa agctgagcaa aatacattgg cattatgtca ttattgatga
     2701 aggtcatcgt ataaagaatg cttcgtgcaa gctcaatgct gaattgaagc attatcatag
     2761 ttcccataga ttgcttttga ctggaactcc tttgcagaat aatcttgagg aactatgggc
     2821 acttcttaac tttctattgc caaatatttt taattcgtca gaggattttt cccaatggtt
     2881 caacaaacca tttgaaagta atgcagacaa ctcacttgaa gaggctttgc tctctgagga
     2941 ggaaaatcta ttaattataa accgtcttca ccaagttttg cgcccatttg tgcttagaag
     3001 actgaaacac aaggttgaga atgagctacc tgaaaagata gaaagacttg taagatgtga
     3061 ggcttctgca tatcaaaagc tattgatgca gagggtagat gacagtcttg gtgcatttgg
     3121 tgctacaaag gctcgagcag tgcacaattc tgtcgttgaa ttacgaaata tttgcaatca
     3181 tccgtacctt agccagcttc ataatgaaga ggttcatgaa ttcattccaa agcattatct
     3241 tccaaatatt ataaggtttt gtgggaagct tgagatgtta gatagactgt tgcccaagct
     3301 aaaagctaca gatcatcgga tacttctctt ctcaacgatg acccggctcc ttgatgttat
     3361 ggaggattat ttgtattgga aacagtatcg gtaccttcgt ttagatggac acacatctgg
     3421 aggtgaccgt ggggcattaa ttgatgagtt caacagacca ggatcgccat atttcatatt
     3481 cctactcagt atacgtgctg gtggtgttgg agttaatctt caagctgcgg atacagtcat
     3541 tatttttgac acagattgga atccacaggt tgacctgcaa gcacaggcta gggctcacag
     3601 gataggtcag aagaaggaag tactcgttct tcggttagaa actgttaaat cggtagagga
     3661 gcaagttcga gcttcagctg agcacaaact tggagttgct aatcagagca ttactgctgg
     3721 gttttttgac aataacacaa gtgcggaaga ccgaagagaa tacttggagg ctctgctgcg
     3781 tgagtgtaag aaagaggaag cggctcctgt cttaaatgat gatgctctca ataatatcat
     3841 agccaggagt gagtctgaaa ttgacgtatt tgaggaaatt gatataaaac ggcaagaaga
     3901 ggagctgtct gtatggaaaa agttgttagt tgagcaaggg ggaacaagta cagaagccac
     3961 acctcccctt cctcctaggc ttgtgacgga aagtgaattg aagtcattct gtgaagctat
     4021 gaaggcaatt gaagttccta aacctgtagt tgtcccaggt atcggaggta aaaggagtag
     4081 agagcttggg aacttagata ttcaacatta tggaagggga aagcgtgcac gagaggtgcg
     4141 ttcttatgag gagcaatgga cggaagacga atttgataag ctatgtcaag ctgaaaatct
     4201 cagccctcct atccacaagg aagaactaaa agaacaggat ttgcccgttg ccaaaaatga
     4261 atctgccacg gtcagtgcta cagaagctgc agtgttgcca aacgtacagc caatgcaacc
     4321 tttggatcgc agcgttcaac agcacaagga gataaatccc ccattaaaac ggggtcgtgg
     4381 taggcctaaa aagaaaccat cagggatgtc ttcaactcca attggttatc cagcatcttc
     4441 aatacctatc tcttctactc ctaaaagtgt tcctccaact gtccaaccgt tgggtgtaca
     4501 aacggctcct ggttctcagt tgaatattac cagcccttct ggttccaagt caacttcctc
     4561 tgatacattg acatctgcta atactaatga gaccatgact gtgcctcctg gttttcagcc
     4621 agttacagat catcctcctg gttttcatcc aactgcagat catgatcatc ctcctggttt
     4681 tcagccaact gtagatcatc ctcctggttt tgaatcgttg accgttcccc ctccaggctt
     4741 taagcccatt atctctcctc agcagataac ccctccaccc cctggattcg aaccgaagat
     4801 ggcatcaccc cctcccatgg caggttctca gtcaacccct actgtccctg ctgcaccctt
     4861 accaaccagc accttgaatt ctcccagttc tcattcgatt gccgcatctc attctacctc
     4921 tacatccaag gcagatctcc ctcctggcac tctatcaagc cctactttac cttcgggtcc
     4981 cgtttcagag ccagtggtcc ccccaacctc atccgattcc cagtctacta aatctcctgc
     5041 agtgacacct ggcagaggca gaggtcgggg acgtggtcgg ggtcgaggta gaggccgtgg
     5101 tgaaataatt gattctgaag ttgttcccca acgcaggggt cagatgctgc ataatgtggt
     5161 attagctatt cccaataatc aaacttctcc agttggcaag ccagaaacag attccccagt
     5221 gggtccctct actgcttctg aaataggcaa caagtcttcg gtttccgtct ccactaatat
     5281 aaatgctatc aatagcacac cagctactgc ttctgaaaca ggcaaaaagt cttcggtttc
     5341 tgccaccact aatataaatg ctcagagtag cacaccagtt actgcttctg aaacaggcaa
     5401 cgagtccttg gtttctgtct ccactaatat aaatactgtc agtagcacac cagttatagg
     5461 ggtagctgat actcctgtac aaaaagtatc cccttctgaa acctccactg ctgatatcgc
     5521 atcaccaaaa acaccagtcc ctactgcacc tgtcgctaca tcttctacgt tgacagacac
     5581 cggtagtacc atggtgggga ccacacagac acctgtttcc gtttctgtag gttctcagtt
     5641 cactgagctt ggaacaataa gtcctcagac agctacacca cctgtatcta ctccgattgg
     5701 cgctgattct gcaactccta atcctgtatc aaagcaaggt cgaggacgcg gaagaaaggc
     5761 ggctgagagt gggttagggt cacctcgcct cacgcgaagg aagaaaaagg atttggtaga
     5821 agctcaggag aaaacatcta atgaaccagt acagaagaaa acacgagtat cttctggtag
     5881 aaaaaccgta gctacaagaa gtatgctacg aaatgaagct cagaaaggga aagatcaacc
     5941 tatcctaaca gatgaccatt ccggcaaagg taataagttg ggtcaatcgt cagaattaag
     6001 caagtttgcc gatgcaagta cagtagacaa tagcttaagt acccaagagg agaaggttga
     6061 agagccaaaa ggtattgcag tggccactga gtcagtttca aagattcgtg atgctggtaa
     6121 agataccaag cctgacgaat tggatcccaa gacatcaatt aatatggaga agggaacaga
     6181 gtccaaatca gagacgctgg aggggaaagg gtccaaaccc tctaaagaag ttgagaagtt
     6241 gtcccacact gaggatactt tagccacaaa agttgatctc aaggaagaga ctgagcaaga
     6301 ggaactagca atagcttgca ctgcttcaga agatgctaac aaagataata aaactgaagt
     6361 tatcgtgtct gaaagcgaat gtcctgtcaa aaaggtatcc aagactgaag aaaacaatcc
     6421 tataatcatt ggagagaccc tggaggctga cactgctgaa ggagccattg aagataatgt
     6481 agttgaagtt gttcaaaagc gtaagaccgt gaatacttac attattggag acttacaggt
     6541 ggaaactgaa gctgcctctt caaaaagcac cgatgagatc tcccataaag aatctgagtt
     6601 taaggagaag gatcaaggag ctgaagatcc cataagggaa gatgtggttg ataccatcaa
     6661 gacatcgtta gagctttctg ttacacaggg cgagggagat gatcctgcaa atgttgaagg
     6721 aagcagtgta gttgaaagag atgctaaatc atctgacgat gtagtggaaa caagtggtgt
     6781 gtcagatgac gttgaaaaag ctgtagttga ggatgagaat acaacagatg atccccctgt
     6841 taaagaagtt gaagatgcct gtcaaggaga aactgagaat gagaaattgg gagatgttag
     6901 ttccattgca gaaaatgtag ttgacgtgga gacaatacat gctcctcccg tcagtgtgga
     6961 tgaaatggaa ggtgttgaaa caagtgtttc agaatctcca ttagacacag gtgtcaaacc
     7021 ttttgaaaaa gctgatgctg cctccttggt ggatacgggt aaacaagaaa ttgaccacag
     7081 tgacagagat acggtgatgg agatagatga caaatcctct caaaagttgg agaaccctga
     7141 aagtgaggaa tcagtaaaag tacttcctga tgtacaggag acaattgagg tttctgaaac
     7201 cactgatggt gctatgcctg tgaacacgga agtcacccct tttgaagaga acaataatga
     7261 aatgccggga gagtctgtta ttggtgctga acagagtaca gattctcttc ctcttcaaga
     7321 ggatgaaaac ggcggccttg atgttgacaa agagaatctc ggtgaggcaa taactgagca
     7381 ggggcaacaa gcgacagagt gcaatgcttc aggagatact ggcaaggata ataggactga
     7441 aatgatgctt gaaaatgatg gtcccgttga aaagaagact gaagaagacg atgttgcgct
     7501 cattgatgga gacaccctgg aagccgaccc tgctgaagga gttgcgattg aagaaaatgt
     7561 agtcgagatt gttcagaggg catcaagtcc tgttctgcag cgtacaactg agagttcagg
     7621 gattattgat gacttacccg tggaagcaga aactacttcg tcaaaaagga ccgaagaaat
     7681 ctcccatgca gaaatggagt acaaggagaa ggttcaagaa gctaatgatc tcataatgga
     7741 agatgtagtt aataccaaca agacatcgat tgagctttcc attgcacagg ttgagagaaa
     7801 tgatgttgca actgttgaag taagcaacat tgttgatgct aaatcctctg atgatgtagt
     7861 ggaagcaatt ggcgtgtcgg gtgaccttgg aaaggatgta tctggtgaga agacagcaga
     7921 tgatccccat gttaaagagg gtgaagcgga agtctttgaa acatttaatg caggatcccc
     7981 gctcgacact ggtgtcgaat catctaaaaa agctgatgac gtctccatgg tggaaacgga
     8041 aaaacaagaa aatgatagca ttgagagagg cacactgatg gagatggatg acaaatcctc
     8101 tgaaaagttg gaggatagtg caggttgcgc tgagaaggat attcaactac ctgatgcaca
     8161 ggatgaaaca ggcactctag atgccaacaa agagattctc aatgacgcag aaccaaaacc
     8221 cgttgaaata gtgaacaaag gcatccaagt ggtagctgaa agtgagaatc taaaaggatg
     8281 tgctgacgca ttagaagtca aatggaagga tcttcatgtt ggccaggttg atggaagaag
     8341 tgctgaaacc atcaatgcag aatccctgga taatacacag gccgagtcgt ccaataaatt
     8401 agacggaccc tgtgaggaca aaagtttgca taacgaaaaa gatcacaaac ctccagctga
     8461 gatcgttgag tcaacaaagg atctttctgt ttcagaagtc gctgcacaaa aaaatgtgga
     8521 agaaagagag attaaacctt ctaaaatagg gtctgatgtt tctacagacc aagaactaga
     8581 tgactcaaca aatgagctta tcgtttcaga agttgcttca caaagcccca tggaagaaaa
     8641 cgaaacggaa ccttctaaaa caggaattga cgtctcaaca attaaaggaa ttacagggac
     8701 cgatgcttca acatctatag aagaaaagga gtcagctaaa gagctctctg tttcagaagt
     8761 tgcttcacaa agccacaagg aagaaaagga gaccgaacct tctaaaacag atgatgattc
     8821 gactgtcttg gaacatgcaa ctgtcaagga ccaagatatc agtgaagaaa tcttgagcag
     8881 tgatgttgga gtgcctgatc agtaggctaa atatttaaac aaacagaaca ttagccgtaa
     8941 ttatggttta gcttgtatgg ttgtagctat gtaacaaata ttgaaactgc tcttatatgc
     9001 ttaagctgat gtgttaatta ttggttttac catcttatag aggtatccat gtctcttaaa
     9061 catggtaaaa tatgatatgt aagtgatgtg gtatgaaaac ttgaggaaca agtaaaaggg
     9121 tttacttgaa aagcaagcaa gtaatttgct ggaatatttt tattagaaaa gttttaatta
     9181 tttgttttag gaaacttaat taggtcttat gtgcctatat ataggaatta ggatatatgt
     9241 ttatgttatt ttcattcaat ttttaagtca ataaagttct gtgttcttgt ttactcttca
//
LOCUS       XM_071829732            9297 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839616), transcript variant X5, mRNA.
ACCESSION   XM_071829732
VERSION     XM_071829732.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9297
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9297
                     /gene="LOC139839616"
                     /note="uncharacterized LOC139839616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839616"
     CDS             134..8902
                     /gene="LOC139839616"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071685833.1"
                     /db_xref="GeneID:139839616"
                     /translation="MAATPQNVEMEAAKFLHKLIQESTDEPTKLATKLHVILQHMRTS
                     GKENSMPYQVISRAMETVIKRHGLDIDALMSSRQALTSGPLVGDSSISQSAGTKRSCP
                     SQHTTVENDSTKPIKTEDTSNAAVYSSKSLHGSGTTGHDAYQGSVNQHNSMKTVGSVA
                     GFSASYESTDPGNAAALALKGPAGKALDHEAGFSNVMASASKTLQGASSNSAAEMGVL
                     QNEALRDTGKLPVLQAPPVGPSMPFKEHHLKQLRAQCLVFLAFRNNMMPKKLHLEIAL
                     GNVFPKEDIKEHNHQKGKEQSVGPGFSNTGFVSETNLLKEAEKFDKINDKNDLPAGLP
                     EHNINSRKIEADMQAFEAKESQMPVTKVAQLDPNNIARHAGLFAMPDSQVNRHGQGHL
                     QGFPMNERHMVPKIANVLEKDVILAGNNNGGDDNSELSSSPALPKYTTSEKLIADCLK
                     RKAAADSNWAVKKQKTEQRILARVEKLKEAVSSSEDISAKTKSVIELKKLELLNLQRR
                     LRNEILNDFFRPTSNEIDRLKNIKKHRIGRRSKQIERHEQKMKEERQKRIRERQKDFF
                     GEMEQHRERLEDVFKNRRERVKGFNKYAREFHKRKERLHREKIDRIQREKINLLKIND
                     VEGYLRMVQDAKSDRVRQLLKETEKYLQKLGSKLKEAKVINRCFETDMSGVNDSGEFT
                     IENEDETDQAKHYMESNEKYYLMAHSIKETVAVQPSNLIGGKLREYQMNGLRWLLSLY
                     NNHLNGILADEMGLGKTVQVISLLCYLMENKNDRGPFLVVVPSSVLPGWESEINFWAP
                     SINKIVYSGPPEERRKLFKERIVQQKFNVLLTTYEYLMNKHDRPKLSKIHWHYVIIDE
                     GHRIKNASCKLNAELKHYHSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQ
                     WFNKPFESNADNSLEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERL
                     VRCEASAYQKLLMQRVDDSLGAFGATKARAVHNSVVELRNICNHPYLSQLHNEEVHEF
                     IPKHYLPNIIRFCGKLEMLDRLLPKLKATDHRILLFSTMTRLLDVMEDYLYWKQYRYL
                     RLDGHTSGGDRGALIDEFNRPGSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV
                     DLQAQARAHRIGQKKEVLVLRLETVKSVEEQVRASAEHKLGVANQSITAGFFDNNTSA
                     EDRREYLEALLRECKKEEAAPVLNDDALNNIIARSESEIDVFEEIDIKRQEEELSVWK
                     KLLVEQGGTSTEATPPLPPRLVTESELKSFCEAMKAIEVPKPVVVPGIGGKRSRELGN
                     LDIQHYGRGKRAREVRSYEEQWTEDEFDKLCQAENLSPPIHKEELKEQDLPVAKNESA
                     TVSATEAAVLPNVQPMQPLDRSVQQHKEINPPLKRGRGRPKKKPSGMSSTPIGYPASS
                     IPISSTPKSVPPTVQPLGVQTAPGSQLNITSPSGSKSTSSDTLTSANTNETMTVPPGF
                     QPVTDHPPGFHPTADHDHPPGFQPTVDHPPGFESLTVPPPGFKPIISPQQITPPPPGF
                     EPKMASPPPMAGSQSTPTVPAAPLPTSTLNSPSSHSIAASHSTSTSKADLPPGTLSSP
                     TLPSGPVSEPVVPPTSSDSQSTKSPAVTPGRGRGRGRGRGRGRGRGEIIDSEVVPQRR
                     GQMLHNVVLAIPNNQTSPVGKPETDSPVGPSTASEIGNKSSVSVSTNINAINSTPATA
                     SETGKKSSVSATTNINAQSSTPVTASETGNESLVSVSTNINTVSSTPVIGVADTPVQK
                     VSPSETSTADIASPKTPVPTAPVATSSTLTDTGSTMVGTTQTPVSVSVGSQFTELGTI
                     SPQTATPPVSTPIGADSATPNPVSKQGRGRGRKAAESGLGSPRLTRRKKKDLVEAQEK
                     TSNEPVQKKTRVSSGRKTVATRSMLRNEAQKGKDQPILTDDHSGKGNKLGQSSELSKF
                     ADASTVDNSLSTQEEKVEEPKGIAVATESVSKIRDAGKDTKPDELDPKTSINMEKGTE
                     SKSETLEGKGSKPSKEVEKLSHTEDTLATKVDLKEETEQEELAIACTASEDANKDNKT
                     EVIVSESECPVKKTEENNPIIIGETLEADTAEGAIEDNVVEVVQKRKTVNTYIIGDLQ
                     VETEAASSKSTDEISHKESEFKEKDQGAEDPIREDVVDTIKTSLELSVTQGEGDDPAN
                     VEGSSVVERDAKSSDDVVETSGVSDDVEKAVVEDENTTDDPPVKEVEDACQGETENEK
                     LGDVSSIAENVVDVETIHAPPVSVDEMEGVETSVSESPLDTGVKPFEKADAASLVDTG
                     KQEIDHSDRDTVMEIDDKSSQKLENPESEESVKVLPDVQETIEVSETTDGAMPVNTEV
                     TPFEENNNEMPGESVIGAEQSTDSLPLQEDENGGLDVDKENLGEAITEQGQQATECNA
                     SGDTGKDNRTEMMLENDGPVEKKTEEDDVALIDGDTLEADPAEGVAIEENVVEIVQRA
                     SSPVLQRTTESSGIIDDLPVEAETTSSKRTEEISHAEMEYKEKVQEANDLIMEDVVNT
                     NKTSIELSIAQVKVERNDVATVEVSNIVDAKSSDDVVEAIGVSGDLGKDVSGEKTADD
                     PHVKEGEAEVFETFNAGSPLDTGVESSKKADDVSMVETEKQENDSIERGTLMEMDDKS
                     SEKLEDSAGCAEKDIQLPDAQDETGTLDANKEILNDAEPKPVEIVNKGIQVVAESENL
                     KGCADALEVKWKDLHVGQVDGRSAETINAESLDNTQAESSNKLDGPCEDKSLHNEKDH
                     KPPAEIVESTKDLSVSEVAAQKNVEEREIKPSKIGSDVSTDQELDDSTNELIVSEVAS
                     QSPMEENETEPSKTGIDVSTIKGITGTDASTSIEEKESAKELSVSEVASQSHKEEKET
                     EPSKTDDDSTVLEHATVKDQDISEEILSSDVGVPDQ"
     misc_feature    1700..>2119
                     /gene="LOC139839616"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:464007"
     misc_feature    1913..>4240
                     /gene="LOC139839616"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    <4259..4867
                     /gene="LOC139839616"
                     /note="Sine oculis-binding protein; Region: SOBP;
                     pfam15279"
                     /db_xref="CDD:464609"
     misc_feature    <4637..5797
                     /gene="LOC139839616"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    6083..8821
                     /gene="LOC139839616"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     polyA_site      9297
                     /gene="LOC139839616"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagtcatat gaaatctgca tctatacgtt tcacataaag tgagcaatcc acttcattag
       61 gtagttctca gagcaaatat cgtgattcgt gatcctaatt aaagtagtga agtagtaata
      121 ctagtaaata aatatggcgg caactcccca aaatgttgag atggaagcag caaagttttt
      181 gcataagctt attcaggaat ctactgatga accgacgaaa ttggctacaa aattacacgt
      241 gattttgcag cacatgagaa ccagtggaaa ggagaattca atgccatacc aagttatatc
      301 aagggctatg gagacagtca taaaaagaca cggtcttgat atagatgctt taatgtcttc
      361 acgacaagca ttgactagcg gacctttagt cggagattca tccatatccc aatctgcagg
      421 tacaaaaaga tcatgtcctt cacagcatac cactgtggaa aatgattcca caaaacctat
      481 aaaaacggag gacacatcaa atgctgcagt ctattcaagc aaatccctgc atggttctgg
      541 tactacaggg catgacgctt atcagggatc tgtaaatcaa cacaactcta tgaagactgt
      601 tggatctgtt gccggttttt ctgcttcata tgaatctacg gaccctggaa acgctgcagc
      661 attggcgctt aaaggcccgg ctggtaaggc attggaccat gaagctgggt tctcaaatgt
      721 gatggcaagt gcaagtaaga cacttcaggg tgctagctcg aacagtgctg ctgaaatggg
      781 agtgcttcaa aatgaagctt taagagatac tggaaagttg ccggtgttgc aggcaccgcc
      841 agttggacct tccatgcctt ttaaggaaca tcatttaaag cagcttagag cacaatgtct
      901 tgtatttttg gccttcagga acaatatgat gccaaaaaag ttgcatcttg agattgccct
      961 aggaaatgtc tttcccaagg aagatattaa ggaacataat catcagaagg ggaaggagca
     1021 atctgttggt cctggtttct ccaacaccgg atttgtttca gaaacaaacc tattaaaaga
     1081 agccgagaaa tttgacaaga tcaatgataa aaatgaccta cccgctggtc ttcctgaaca
     1141 taatatcaat tcaaggaaga ttgaggcaga catgcaagct tttgaggcaa aagaatcgca
     1201 gatgcctgta actaaagtag cacagttaga tccaaataat attgcacgac acgctggcct
     1261 atttgctatg cctgatagcc aagtgaaccg gcatggtcag ggtcatttgc aaggttttcc
     1321 tatgaatgaa aggcacatgg tcccgaagat tgctaatgtt cttgaaaagg atgtaatact
     1381 tgcaggaaac aataatgggg gagatgataa ttctgaacta agttcttcac cagcattgcc
     1441 aaagtatact acatctgaaa agttgattgc agattgccta aagaggaaag ctgctgctga
     1501 ttctaactgg gctgtcaaaa agcagaaaac agagcagagg atcttggctc gtgttgagaa
     1561 gttaaaggaa gcagtcagct cttctgaaga catatcagca aaaaccaaga gtgtcattga
     1621 gctaaaaaaa cttgaactcc taaatctcca acgtcgccta cggaatgaga tcctgaatga
     1681 cttctttaga cctacatcta atgagattga tcgccttaaa aatatcaaaa aacataggat
     1741 tggtcgacga tcaaagcaaa tagagaggca tgagcagaaa atgaaagaag agcgtcaaaa
     1801 gagaattcga gaacgacaga aggacttctt tggtgaaatg gaacaacaca gggaaaggct
     1861 ggaagatgta tttaaaaata ggagagaacg agtgaaaggg tttaacaagt atgcaagaga
     1921 gtttcataaa aggaaggaaa gacttcatag ggagaagatt gatagaattc agcgggaaaa
     1981 gattaatctt ttgaaaatta atgacgttga gggttatctt cgaatggttc aggatgcaaa
     2041 gtcggatcga gtgaggcaac tattgaaaga gactgagaag tatcttcaga agcttggatc
     2101 taagctgaaa gaggcaaagg ttataaacag atgctttgag actgatatga gtggtgtaaa
     2161 tgacagtggt gaatttacaa ttgagaatga agatgaaact gaccaggcga agcattatat
     2221 ggagagcaat gagaagtact atctaatggc tcatagcatc aaagagactg tagcagtgca
     2281 gccatcaaat cttattggtg gaaaattgag agagtaccaa atgaatggat tacgatggct
     2341 actgtcactg tacaacaatc atttgaatgg cattcttgca gatgagatgg gcctagggaa
     2401 aactgttcag gttatttctc tactatgtta tctgatggaa aataaaaatg atagagggcc
     2461 atttttggtg gttgtgccat cctcagttct gcctggatgg gagtcggaga ttaacttctg
     2521 ggcccctagc atcaacaaaa ttgtctactc tggtcctcct gaggagcgtc ggaaattatt
     2581 taaggagaga attgttcagc aaaagttcaa tgttctattg acaacgtacg agtatctcat
     2641 gaacaaacat gacagaccaa agctgagcaa aatacattgg cattatgtca ttattgatga
     2701 aggtcatcgt ataaagaatg cttcgtgcaa gctcaatgct gaattgaagc attatcatag
     2761 ttcccataga ttgcttttga ctggaactcc tttgcagaat aatcttgagg aactatgggc
     2821 acttcttaac tttctattgc caaatatttt taattcgtca gaggattttt cccaatggtt
     2881 caacaaacca tttgaaagta atgcagacaa ctcacttgaa gaggctttgc tctctgagga
     2941 ggaaaatcta ttaattataa accgtcttca ccaagttttg cgcccatttg tgcttagaag
     3001 actgaaacac aaggttgaga atgagctacc tgaaaagata gaaagacttg taagatgtga
     3061 ggcttctgca tatcaaaagc tattgatgca gagggtagat gacagtcttg gtgcatttgg
     3121 tgctacaaag gctcgagcag tgcacaattc tgtcgttgaa ttacgaaata tttgcaatca
     3181 tccgtacctt agccagcttc ataatgaaga ggttcatgaa ttcattccaa agcattatct
     3241 tccaaatatt ataaggtttt gtgggaagct tgagatgtta gatagactgt tgcccaagct
     3301 aaaagctaca gatcatcgga tacttctctt ctcaacgatg acccggctcc ttgatgttat
     3361 ggaggattat ttgtattgga aacagtatcg gtaccttcgt ttagatggac acacatctgg
     3421 aggtgaccgt ggggcattaa ttgatgagtt caacagacca ggatcgccat atttcatatt
     3481 cctactcagt atacgtgctg gtggtgttgg agttaatctt caagctgcgg atacagtcat
     3541 tatttttgac acagattgga atccacaggt tgacctgcaa gcacaggcta gggctcacag
     3601 gataggtcag aagaaggaag tactcgttct tcggttagaa actgttaaat cggtagagga
     3661 gcaagttcga gcttcagctg agcacaaact tggagttgct aatcagagca ttactgctgg
     3721 gttttttgac aataacacaa gtgcggaaga ccgaagagaa tacttggagg ctctgctgcg
     3781 tgagtgtaag aaagaggaag cggctcctgt cttaaatgat gatgctctca ataatatcat
     3841 agccaggagt gagtctgaaa ttgacgtatt tgaggaaatt gatataaaac ggcaagaaga
     3901 ggagctgtct gtatggaaaa agttgttagt tgagcaaggg ggaacaagta cagaagccac
     3961 acctcccctt cctcctaggc ttgtgacgga aagtgaattg aagtcattct gtgaagctat
     4021 gaaggcaatt gaagttccta aacctgtagt tgtcccaggt atcggaggta aaaggagtag
     4081 agagcttggg aacttagata ttcaacatta tggaagggga aagcgtgcac gagaggtgcg
     4141 ttcttatgag gagcaatgga cggaagacga atttgataag ctatgtcaag ctgaaaatct
     4201 cagccctcct atccacaagg aagaactaaa agaacaggat ttgcccgttg ccaaaaatga
     4261 atctgccacg gtcagtgcta cagaagctgc agtgttgcca aacgtacagc caatgcaacc
     4321 tttggatcgc agcgttcaac agcacaagga gataaatccc ccattaaaac ggggtcgtgg
     4381 taggcctaaa aagaaaccat cagggatgtc ttcaactcca attggttatc cagcatcttc
     4441 aatacctatc tcttctactc ctaaaagtgt tcctccaact gtccaaccgt tgggtgtaca
     4501 aacggctcct ggttctcagt tgaatattac cagcccttct ggttccaagt caacttcctc
     4561 tgatacattg acatctgcta atactaatga gaccatgact gtgcctcctg gttttcagcc
     4621 agttacagat catcctcctg gttttcatcc aactgcagat catgatcatc ctcctggttt
     4681 tcagccaact gtagatcatc ctcctggttt tgaatcgttg accgttcccc ctccaggctt
     4741 taagcccatt atctctcctc agcagataac ccctccaccc cctggattcg aaccgaagat
     4801 ggcatcaccc cctcccatgg caggttctca gtcaacccct actgtccctg ctgcaccctt
     4861 accaaccagc accttgaatt ctcccagttc tcattcgatt gccgcatctc attctacctc
     4921 tacatccaag gcagatctcc ctcctggcac tctatcaagc cctactttac cttcgggtcc
     4981 cgtttcagag ccagtggtcc ccccaacctc atccgattcc cagtctacta aatctcctgc
     5041 agtgacacct ggcagaggca gaggtcgggg acgtggtcgg ggtcgaggta gaggccgtgg
     5101 tgaaataatt gattctgaag ttgttcccca acgcaggggt cagatgctgc ataatgtggt
     5161 attagctatt cccaataatc aaacttctcc agttggcaag ccagaaacag attccccagt
     5221 gggtccctct actgcttctg aaataggcaa caagtcttcg gtttccgtct ccactaatat
     5281 aaatgctatc aatagcacac cagctactgc ttctgaaaca ggcaaaaagt cttcggtttc
     5341 tgccaccact aatataaatg ctcagagtag cacaccagtt actgcttctg aaacaggcaa
     5401 cgagtccttg gtttctgtct ccactaatat aaatactgtc agtagcacac cagttatagg
     5461 ggtagctgat actcctgtac aaaaagtatc cccttctgaa acctccactg ctgatatcgc
     5521 atcaccaaaa acaccagtcc ctactgcacc tgtcgctaca tcttctacgt tgacagacac
     5581 cggtagtacc atggtgggga ccacacagac acctgtttcc gtttctgtag gttctcagtt
     5641 cactgagctt ggaacaataa gtcctcagac agctacacca cctgtatcta ctccgattgg
     5701 cgctgattct gcaactccta atcctgtatc aaagcaaggt cgaggacgcg gaagaaaggc
     5761 ggctgagagt gggttagggt cacctcgcct cacgcgaagg aagaaaaagg atttggtaga
     5821 agctcaggag aaaacatcta atgaaccagt acagaagaaa acacgagtat cttctggtag
     5881 aaaaaccgta gctacaagaa gtatgctacg aaatgaagct cagaaaggga aagatcaacc
     5941 tatcctaaca gatgaccatt ccggcaaagg taataagttg ggtcaatcgt cagaattaag
     6001 caagtttgcc gatgcaagta cagtagacaa tagcttaagt acccaagagg agaaggttga
     6061 agagccaaaa ggtattgcag tggccactga gtcagtttca aagattcgtg atgctggtaa
     6121 agataccaag cctgacgaat tggatcccaa gacatcaatt aatatggaga agggaacaga
     6181 gtccaaatca gagacgctgg aggggaaagg gtccaaaccc tctaaagaag ttgagaagtt
     6241 gtcccacact gaggatactt tagccacaaa agttgatctc aaggaagaga ctgagcaaga
     6301 ggaactagca atagcttgca ctgcttcaga agatgctaac aaagataata aaactgaagt
     6361 tatcgtgtct gaaagcgaat gtcctgtcaa aaagactgaa gaaaacaatc ctataatcat
     6421 tggagagacc ctggaggctg acactgctga aggagccatt gaagataatg tagttgaagt
     6481 tgttcaaaag cgtaagaccg tgaatactta cattattgga gacttacagg tggaaactga
     6541 agctgcctct tcaaaaagca ccgatgagat ctcccataaa gaatctgagt ttaaggagaa
     6601 ggatcaagga gctgaagatc ccataaggga agatgtggtt gataccatca agacatcgtt
     6661 agagctttct gttacacagg gcgagggaga tgatcctgca aatgttgaag gaagcagtgt
     6721 agttgaaaga gatgctaaat catctgacga tgtagtggaa acaagtggtg tgtcagatga
     6781 cgttgaaaaa gctgtagttg aggatgagaa tacaacagat gatccccctg ttaaagaagt
     6841 tgaagatgcc tgtcaaggag aaactgagaa tgagaaattg ggagatgtta gttccattgc
     6901 agaaaatgta gttgacgtgg agacaataca tgctcctccc gtcagtgtgg atgaaatgga
     6961 aggtgttgaa acaagtgttt cagaatctcc attagacaca ggtgtcaaac cttttgaaaa
     7021 agctgatgct gcctccttgg tggatacggg taaacaagaa attgaccaca gtgacagaga
     7081 tacggtgatg gagatagatg acaaatcctc tcaaaagttg gagaaccctg aaagtgagga
     7141 atcagtaaaa gtacttcctg atgtacagga gacaattgag gtttctgaaa ccactgatgg
     7201 tgctatgcct gtgaacacgg aagtcacccc ttttgaagag aacaataatg aaatgccggg
     7261 agagtctgtt attggtgctg aacagagtac agattctctt cctcttcaag aggatgaaaa
     7321 cggcggcctt gatgttgaca aagagaatct cggtgaggca ataactgagc aggggcaaca
     7381 agcgacagag tgcaatgctt caggagatac tggcaaggat aataggactg aaatgatgct
     7441 tgaaaatgat ggtcccgttg aaaagaagac tgaagaagac gatgttgcgc tcattgatgg
     7501 agacaccctg gaagccgacc ctgctgaagg agttgcgatt gaagaaaatg tagtcgagat
     7561 tgttcagagg gcatcaagtc ctgttctgca gcgtacaact gagagttcag ggattattga
     7621 tgacttaccc gtggaagcag aaactacttc gtcaaaaagg accgaagaaa tctcccatgc
     7681 agaaatggag tacaaggaga aggttcaaga agctaatgat ctcataatgg aagatgtagt
     7741 taataccaac aagacatcga ttgagctttc cattgcacag gttaaggttg agagaaatga
     7801 tgttgcaact gttgaagtaa gcaacattgt tgatgctaaa tcctctgatg atgtagtgga
     7861 agcaattggc gtgtcgggtg accttggaaa ggatgtatct ggtgagaaga cagcagatga
     7921 tccccatgtt aaagagggtg aagcggaagt ctttgaaaca tttaatgcag gatccccgct
     7981 cgacactggt gtcgaatcat ctaaaaaagc tgatgacgtc tccatggtgg aaacggaaaa
     8041 acaagaaaat gatagcattg agagaggcac actgatggag atggatgaca aatcctctga
     8101 aaagttggag gatagtgcag gttgcgctga gaaggatatt caactacctg atgcacagga
     8161 tgaaacaggc actctagatg ccaacaaaga gattctcaat gacgcagaac caaaacccgt
     8221 tgaaatagtg aacaaaggca tccaagtggt agctgaaagt gagaatctaa aaggatgtgc
     8281 tgacgcatta gaagtcaaat ggaaggatct tcatgttggc caggttgatg gaagaagtgc
     8341 tgaaaccatc aatgcagaat ccctggataa tacacaggcc gagtcgtcca ataaattaga
     8401 cggaccctgt gaggacaaaa gtttgcataa cgaaaaagat cacaaacctc cagctgagat
     8461 cgttgagtca acaaaggatc tttctgtttc agaagtcgct gcacaaaaaa atgtggaaga
     8521 aagagagatt aaaccttcta aaatagggtc tgatgtttct acagaccaag aactagatga
     8581 ctcaacaaat gagcttatcg tttcagaagt tgcttcacaa agccccatgg aagaaaacga
     8641 aacggaacct tctaaaacag gaattgacgt ctcaacaatt aaaggaatta cagggaccga
     8701 tgcttcaaca tctatagaag aaaaggagtc agctaaagag ctctctgttt cagaagttgc
     8761 ttcacaaagc cacaaggaag aaaaggagac cgaaccttct aaaacagatg atgattcgac
     8821 tgtcttggaa catgcaactg tcaaggacca agatatcagt gaagaaatct tgagcagtga
     8881 tgttggagtg cctgatcagt aggctaaata tttaaacaaa cagaacatta gccgtaatta
     8941 tggtttagct tgtatggttg tagctatgta acaaatattg aaactgctct tatatgctta
     9001 agctgatgtg ttaattattg gttttaccat cttatagagg tatccatgtc tcttaaacat
     9061 ggtaaaatat gatatgtaag tgatgtggta tgaaaacttg aggaacaagt aaaagggttt
     9121 acttgaaaag caagcaagta atttgctgga atatttttat tagaaaagtt ttaattattt
     9181 gttttaggaa acttaattag gtcttatgtg cctatatata ggaattagga tatatgttta
     9241 tgttattttc attcaatttt taagtcaata aagttctgtg ttcttgttta ctcttca
//
LOCUS       XM_071829733            9291 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839616), transcript variant X6, mRNA.
ACCESSION   XM_071829733
VERSION     XM_071829733.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9291
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9291
                     /gene="LOC139839616"
                     /note="uncharacterized LOC139839616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839616"
     CDS             134..8896
                     /gene="LOC139839616"
                     /codon_start=1
                     /product="uncharacterized protein isoform X5"
                     /protein_id="XP_071685834.1"
                     /db_xref="GeneID:139839616"
                     /translation="MAATPQNVEMEAAKFLHKLIQESTDEPTKLATKLHVILQHMRTS
                     GKENSMPYQVISRAMETVIKRHGLDIDALMSSRQALTSGPLVGDSSISQSAGPSQHTT
                     VENDSTKPIKTEDTSNAAVYSSKSLHGSGTTGHDAYQGSVNQHNSMKTVGSVAGFSAS
                     YESTDPGNAAALALKGPAGKALDHEAGFSNVMASASKTLQGASSNSAAEMGVLQNEAL
                     RDTGKLPVLQAPPVGPSMPFKEHHLKQLRAQCLVFLAFRNNMMPKKLHLEIALGNVFP
                     KEDIKEHNHQKGKEQSVGPGFSNTGFVSETNLLKEAEKFDKINDKNDLPAGLPEHNIN
                     SRKIEADMQAFEAKESQMPVTKVAQLDPNNIARHAGLFAMPDSQVNRHGQGHLQGFPM
                     NERHMVPKIANVLEKDVILAGNNNGGDDNSELSSSPALPKYTTSEKLIADCLKRKAAA
                     DSNWAVKKQKTEQRILARVEKLKEAVSSSEDISAKTKSVIELKKLELLNLQRRLRNEI
                     LNDFFRPTSNEIDRLKNIKKHRIGRRSKQIERHEQKMKEERQKRIRERQKDFFGEMEQ
                     HRERLEDVFKNRRERVKGFNKYAREFHKRKERLHREKIDRIQREKINLLKINDVEGYL
                     RMVQDAKSDRVRQLLKETEKYLQKLGSKLKEAKVINRCFETDMSGVNDSGEFTIENED
                     ETDQAKHYMESNEKYYLMAHSIKETVAVQPSNLIGGKLREYQMNGLRWLLSLYNNHLN
                     GILADEMGLGKTVQVISLLCYLMENKNDRGPFLVVVPSSVLPGWESEINFWAPSINKI
                     VYSGPPEERRKLFKERIVQQKFNVLLTTYEYLMNKHDRPKLSKIHWHYVIIDEGHRIK
                     NASCKLNAELKHYHSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKP
                     FESNADNSLEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEA
                     SAYQKLLMQRVDDSLGAFGATKARAVHNSVVELRNICNHPYLSQLHNEEVHEFIPKHY
                     LPNIIRFCGKLEMLDRLLPKLKATDHRILLFSTMTRLLDVMEDYLYWKQYRYLRLDGH
                     TSGGDRGALIDEFNRPGSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQ
                     ARAHRIGQKKEVLVLRLETVKSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRRE
                     YLEALLRECKKEEAAPVLNDDALNNIIARSESEIDVFEEIDIKRQEEELSVWKKLLVE
                     QGGTSTEATPPLPPRLVTESELKSFCEAMKAIEVPKPVVVPGIGGKRSRELGNLDIQH
                     YGRGKRAREVRSYEEQWTEDEFDKLCQAENLSPPIHKEELKEQDLPVAKNESATVSAT
                     EAAVLPNVQPMQPLDRSVQQHKEINPPLKRGRGRPKKKPSGMSSTPIGYPASSIPISS
                     TPKSVPPTVQPLGVQTAPGSQLNITSPSGSKSTSSDTLTSANTNETMTVPPGFQPVTD
                     HPPGFHPTADHDHPPGFQPTVDHPPGFESLTVPPPGFKPIISPQQITPPPPGFEPKMA
                     SPPPMAGSQSTPTVPAAPLPTSTLNSPSSHSIAASHSTSTSKADLPPGTLSSPTLPSG
                     PVSEPVVPPTSSDSQSTKSPAVTPGRGRGRGRGRGRGRGRGEIIDSEVVPQRRGQMLH
                     NVVLAIPNNQTSPVGKPETDSPVGPSTASEIGNKSSVSVSTNINAINSTPATASETGK
                     KSSVSATTNINAQSSTPVTASETGNESLVSVSTNINTVSSTPVIGVADTPVQKVSPSE
                     TSTADIASPKTPVPTAPVATSSTLTDTGSTMVGTTQTPVSVSVGSQFTELGTISPQTA
                     TPPVSTPIGADSATPNPVSKQGRGRGRKAAESGLGSPRLTRRKKKDLVEAQEKTSNEP
                     VQKKTRVSSGRKTVATRSMLRNEAQKGKDQPILTDDHSGKGNKLGQSSELSKFADAST
                     VDNSLSTQEEKVEEPKGIAVATESVSKIRDAGKDTKPDELDPKTSINMEKGTESKSET
                     LEGKGSKPSKEVEKLSHTEDTLATKVDLKEETEQEELAIACTASEDANKDNKTEVIVS
                     ESECPVKKVSKTEENNPIIIGETLEADTAEGAIEDNVVEVVQKRKTVNTYIIGDLQVE
                     TEAASSKSTDEISHKESEFKEKDQGAEDPIREDVVDTIKTSLELSVTQGEGDDPANVE
                     GSSVVERDAKSSDDVVETSGVSDDVEKAVVEDENTTDDPPVKEVEDACQGETENEKLG
                     DVSSIAENVVDVETIHAPPVSVDEMEGVETSVSESPLDTGVKPFEKADAASLVDTGKQ
                     EIDHSDRDTVMEIDDKSSQKLENPESEESVKVLPDVQETIEVSETTDGAMPVNTEVTP
                     FEENNNEMPGESVIGAEQSTDSLPLQEDENGGLDVDKENLGEAITEQGQQATECNASG
                     DTGKDNRTEMMLENDGPVEKKTEEDDVALIDGDTLEADPAEGVAIEENVVEIVQRASS
                     PVLQRTTESSGIIDDLPVEAETTSSKRTEEISHAEMEYKEKVQEANDLIMEDVVNTNK
                     TSIELSIAQVKVERNDVATVEVSNIVDAKSSDDVVEAIGVSGDLGKDVSGEKTADDPH
                     VKEGEAEVFETFNAGSPLDTGVESSKKADDVSMVETEKQENDSIERGTLMEMDDKSSE
                     KLEDSAGCAEKDIQLPDAQDETGTLDANKEILNDAEPKPVEIVNKGIQVVAESENLKG
                     CADALEVKWKDLHVGQVDGRSAETINAESLDNTQAESSNKLDGPCEDKSLHNEKDHKP
                     PAEIVESTKDLSVSEVAAQKNVEEREIKPSKIGSDVSTDQELDDSTNELIVSEVASQS
                     PMEENETEPSKTGIDVSTIKGITGTDASTSIEEKESAKELSVSEVASQSHKEEKETEP
                     SKTDDDSTVLEHATVKDQDISEEILSSDVGVPDQ"
     misc_feature    1685..>2104
                     /gene="LOC139839616"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:464007"
     misc_feature    1898..>4225
                     /gene="LOC139839616"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    <4244..4852
                     /gene="LOC139839616"
                     /note="Sine oculis-binding protein; Region: SOBP;
                     pfam15279"
                     /db_xref="CDD:464609"
     misc_feature    <4622..5782
                     /gene="LOC139839616"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    6068..8815
                     /gene="LOC139839616"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     polyA_site      9291
                     /gene="LOC139839616"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagtcatat gaaatctgca tctatacgtt tcacataaag tgagcaatcc acttcattag
       61 gtagttctca gagcaaatat cgtgattcgt gatcctaatt aaagtagtga agtagtaata
      121 ctagtaaata aatatggcgg caactcccca aaatgttgag atggaagcag caaagttttt
      181 gcataagctt attcaggaat ctactgatga accgacgaaa ttggctacaa aattacacgt
      241 gattttgcag cacatgagaa ccagtggaaa ggagaattca atgccatacc aagttatatc
      301 aagggctatg gagacagtca taaaaagaca cggtcttgat atagatgctt taatgtcttc
      361 acgacaagca ttgactagcg gacctttagt cggagattca tccatatccc aatctgcagg
      421 tccttcacag cataccactg tggaaaatga ttccacaaaa cctataaaaa cggaggacac
      481 atcaaatgct gcagtctatt caagcaaatc cctgcatggt tctggtacta cagggcatga
      541 cgcttatcag ggatctgtaa atcaacacaa ctctatgaag actgttggat ctgttgccgg
      601 tttttctgct tcatatgaat ctacggaccc tggaaacgct gcagcattgg cgcttaaagg
      661 cccggctggt aaggcattgg accatgaagc tgggttctca aatgtgatgg caagtgcaag
      721 taagacactt cagggtgcta gctcgaacag tgctgctgaa atgggagtgc ttcaaaatga
      781 agctttaaga gatactggaa agttgccggt gttgcaggca ccgccagttg gaccttccat
      841 gccttttaag gaacatcatt taaagcagct tagagcacaa tgtcttgtat ttttggcctt
      901 caggaacaat atgatgccaa aaaagttgca tcttgagatt gccctaggaa atgtctttcc
      961 caaggaagat attaaggaac ataatcatca gaaggggaag gagcaatctg ttggtcctgg
     1021 tttctccaac accggatttg tttcagaaac aaacctatta aaagaagccg agaaatttga
     1081 caagatcaat gataaaaatg acctacccgc tggtcttcct gaacataata tcaattcaag
     1141 gaagattgag gcagacatgc aagcttttga ggcaaaagaa tcgcagatgc ctgtaactaa
     1201 agtagcacag ttagatccaa ataatattgc acgacacgct ggcctatttg ctatgcctga
     1261 tagccaagtg aaccggcatg gtcagggtca tttgcaaggt tttcctatga atgaaaggca
     1321 catggtcccg aagattgcta atgttcttga aaaggatgta atacttgcag gaaacaataa
     1381 tgggggagat gataattctg aactaagttc ttcaccagca ttgccaaagt atactacatc
     1441 tgaaaagttg attgcagatt gcctaaagag gaaagctgct gctgattcta actgggctgt
     1501 caaaaagcag aaaacagagc agaggatctt ggctcgtgtt gagaagttaa aggaagcagt
     1561 cagctcttct gaagacatat cagcaaaaac caagagtgtc attgagctaa aaaaacttga
     1621 actcctaaat ctccaacgtc gcctacggaa tgagatcctg aatgacttct ttagacctac
     1681 atctaatgag attgatcgcc ttaaaaatat caaaaaacat aggattggtc gacgatcaaa
     1741 gcaaatagag aggcatgagc agaaaatgaa agaagagcgt caaaagagaa ttcgagaacg
     1801 acagaaggac ttctttggtg aaatggaaca acacagggaa aggctggaag atgtatttaa
     1861 aaataggaga gaacgagtga aagggtttaa caagtatgca agagagtttc ataaaaggaa
     1921 ggaaagactt catagggaga agattgatag aattcagcgg gaaaagatta atcttttgaa
     1981 aattaatgac gttgagggtt atcttcgaat ggttcaggat gcaaagtcgg atcgagtgag
     2041 gcaactattg aaagagactg agaagtatct tcagaagctt ggatctaagc tgaaagaggc
     2101 aaaggttata aacagatgct ttgagactga tatgagtggt gtaaatgaca gtggtgaatt
     2161 tacaattgag aatgaagatg aaactgacca ggcgaagcat tatatggaga gcaatgagaa
     2221 gtactatcta atggctcata gcatcaaaga gactgtagca gtgcagccat caaatcttat
     2281 tggtggaaaa ttgagagagt accaaatgaa tggattacga tggctactgt cactgtacaa
     2341 caatcatttg aatggcattc ttgcagatga gatgggccta gggaaaactg ttcaggttat
     2401 ttctctacta tgttatctga tggaaaataa aaatgataga gggccatttt tggtggttgt
     2461 gccatcctca gttctgcctg gatgggagtc ggagattaac ttctgggccc ctagcatcaa
     2521 caaaattgtc tactctggtc ctcctgagga gcgtcggaaa ttatttaagg agagaattgt
     2581 tcagcaaaag ttcaatgttc tattgacaac gtacgagtat ctcatgaaca aacatgacag
     2641 accaaagctg agcaaaatac attggcatta tgtcattatt gatgaaggtc atcgtataaa
     2701 gaatgcttcg tgcaagctca atgctgaatt gaagcattat catagttccc atagattgct
     2761 tttgactgga actcctttgc agaataatct tgaggaacta tgggcacttc ttaactttct
     2821 attgccaaat atttttaatt cgtcagagga tttttcccaa tggttcaaca aaccatttga
     2881 aagtaatgca gacaactcac ttgaagaggc tttgctctct gaggaggaaa atctattaat
     2941 tataaaccgt cttcaccaag ttttgcgccc atttgtgctt agaagactga aacacaaggt
     3001 tgagaatgag ctacctgaaa agatagaaag acttgtaaga tgtgaggctt ctgcatatca
     3061 aaagctattg atgcagaggg tagatgacag tcttggtgca tttggtgcta caaaggctcg
     3121 agcagtgcac aattctgtcg ttgaattacg aaatatttgc aatcatccgt accttagcca
     3181 gcttcataat gaagaggttc atgaattcat tccaaagcat tatcttccaa atattataag
     3241 gttttgtggg aagcttgaga tgttagatag actgttgccc aagctaaaag ctacagatca
     3301 tcggatactt ctcttctcaa cgatgacccg gctccttgat gttatggagg attatttgta
     3361 ttggaaacag tatcggtacc ttcgtttaga tggacacaca tctggaggtg accgtggggc
     3421 attaattgat gagttcaaca gaccaggatc gccatatttc atattcctac tcagtatacg
     3481 tgctggtggt gttggagtta atcttcaagc tgcggataca gtcattattt ttgacacaga
     3541 ttggaatcca caggttgacc tgcaagcaca ggctagggct cacaggatag gtcagaagaa
     3601 ggaagtactc gttcttcggt tagaaactgt taaatcggta gaggagcaag ttcgagcttc
     3661 agctgagcac aaacttggag ttgctaatca gagcattact gctgggtttt ttgacaataa
     3721 cacaagtgcg gaagaccgaa gagaatactt ggaggctctg ctgcgtgagt gtaagaaaga
     3781 ggaagcggct cctgtcttaa atgatgatgc tctcaataat atcatagcca ggagtgagtc
     3841 tgaaattgac gtatttgagg aaattgatat aaaacggcaa gaagaggagc tgtctgtatg
     3901 gaaaaagttg ttagttgagc aagggggaac aagtacagaa gccacacctc cccttcctcc
     3961 taggcttgtg acggaaagtg aattgaagtc attctgtgaa gctatgaagg caattgaagt
     4021 tcctaaacct gtagttgtcc caggtatcgg aggtaaaagg agtagagagc ttgggaactt
     4081 agatattcaa cattatggaa ggggaaagcg tgcacgagag gtgcgttctt atgaggagca
     4141 atggacggaa gacgaatttg ataagctatg tcaagctgaa aatctcagcc ctcctatcca
     4201 caaggaagaa ctaaaagaac aggatttgcc cgttgccaaa aatgaatctg ccacggtcag
     4261 tgctacagaa gctgcagtgt tgccaaacgt acagccaatg caacctttgg atcgcagcgt
     4321 tcaacagcac aaggagataa atcccccatt aaaacggggt cgtggtaggc ctaaaaagaa
     4381 accatcaggg atgtcttcaa ctccaattgg ttatccagca tcttcaatac ctatctcttc
     4441 tactcctaaa agtgttcctc caactgtcca accgttgggt gtacaaacgg ctcctggttc
     4501 tcagttgaat attaccagcc cttctggttc caagtcaact tcctctgata cattgacatc
     4561 tgctaatact aatgagacca tgactgtgcc tcctggtttt cagccagtta cagatcatcc
     4621 tcctggtttt catccaactg cagatcatga tcatcctcct ggttttcagc caactgtaga
     4681 tcatcctcct ggttttgaat cgttgaccgt tccccctcca ggctttaagc ccattatctc
     4741 tcctcagcag ataacccctc caccccctgg attcgaaccg aagatggcat caccccctcc
     4801 catggcaggt tctcagtcaa cccctactgt ccctgctgca cccttaccaa ccagcacctt
     4861 gaattctccc agttctcatt cgattgccgc atctcattct acctctacat ccaaggcaga
     4921 tctccctcct ggcactctat caagccctac tttaccttcg ggtcccgttt cagagccagt
     4981 ggtcccccca acctcatccg attcccagtc tactaaatct cctgcagtga cacctggcag
     5041 aggcagaggt cggggacgtg gtcggggtcg aggtagaggc cgtggtgaaa taattgattc
     5101 tgaagttgtt ccccaacgca ggggtcagat gctgcataat gtggtattag ctattcccaa
     5161 taatcaaact tctccagttg gcaagccaga aacagattcc ccagtgggtc cctctactgc
     5221 ttctgaaata ggcaacaagt cttcggtttc cgtctccact aatataaatg ctatcaatag
     5281 cacaccagct actgcttctg aaacaggcaa aaagtcttcg gtttctgcca ccactaatat
     5341 aaatgctcag agtagcacac cagttactgc ttctgaaaca ggcaacgagt ccttggtttc
     5401 tgtctccact aatataaata ctgtcagtag cacaccagtt ataggggtag ctgatactcc
     5461 tgtacaaaaa gtatcccctt ctgaaacctc cactgctgat atcgcatcac caaaaacacc
     5521 agtccctact gcacctgtcg ctacatcttc tacgttgaca gacaccggta gtaccatggt
     5581 ggggaccaca cagacacctg tttccgtttc tgtaggttct cagttcactg agcttggaac
     5641 aataagtcct cagacagcta caccacctgt atctactccg attggcgctg attctgcaac
     5701 tcctaatcct gtatcaaagc aaggtcgagg acgcggaaga aaggcggctg agagtgggtt
     5761 agggtcacct cgcctcacgc gaaggaagaa aaaggatttg gtagaagctc aggagaaaac
     5821 atctaatgaa ccagtacaga agaaaacacg agtatcttct ggtagaaaaa ccgtagctac
     5881 aagaagtatg ctacgaaatg aagctcagaa agggaaagat caacctatcc taacagatga
     5941 ccattccggc aaaggtaata agttgggtca atcgtcagaa ttaagcaagt ttgccgatgc
     6001 aagtacagta gacaatagct taagtaccca agaggagaag gttgaagagc caaaaggtat
     6061 tgcagtggcc actgagtcag tttcaaagat tcgtgatgct ggtaaagata ccaagcctga
     6121 cgaattggat cccaagacat caattaatat ggagaaggga acagagtcca aatcagagac
     6181 gctggagggg aaagggtcca aaccctctaa agaagttgag aagttgtccc acactgagga
     6241 tactttagcc acaaaagttg atctcaagga agagactgag caagaggaac tagcaatagc
     6301 ttgcactgct tcagaagatg ctaacaaaga taataaaact gaagttatcg tgtctgaaag
     6361 cgaatgtcct gtcaaaaagg tatccaagac tgaagaaaac aatcctataa tcattggaga
     6421 gaccctggag gctgacactg ctgaaggagc cattgaagat aatgtagttg aagttgttca
     6481 aaagcgtaag accgtgaata cttacattat tggagactta caggtggaaa ctgaagctgc
     6541 ctcttcaaaa agcaccgatg agatctccca taaagaatct gagtttaagg agaaggatca
     6601 aggagctgaa gatcccataa gggaagatgt ggttgatacc atcaagacat cgttagagct
     6661 ttctgttaca cagggcgagg gagatgatcc tgcaaatgtt gaaggaagca gtgtagttga
     6721 aagagatgct aaatcatctg acgatgtagt ggaaacaagt ggtgtgtcag atgacgttga
     6781 aaaagctgta gttgaggatg agaatacaac agatgatccc cctgttaaag aagttgaaga
     6841 tgcctgtcaa ggagaaactg agaatgagaa attgggagat gttagttcca ttgcagaaaa
     6901 tgtagttgac gtggagacaa tacatgctcc tcccgtcagt gtggatgaaa tggaaggtgt
     6961 tgaaacaagt gtttcagaat ctccattaga cacaggtgtc aaaccttttg aaaaagctga
     7021 tgctgcctcc ttggtggata cgggtaaaca agaaattgac cacagtgaca gagatacggt
     7081 gatggagata gatgacaaat cctctcaaaa gttggagaac cctgaaagtg aggaatcagt
     7141 aaaagtactt cctgatgtac aggagacaat tgaggtttct gaaaccactg atggtgctat
     7201 gcctgtgaac acggaagtca ccccttttga agagaacaat aatgaaatgc cgggagagtc
     7261 tgttattggt gctgaacaga gtacagattc tcttcctctt caagaggatg aaaacggcgg
     7321 ccttgatgtt gacaaagaga atctcggtga ggcaataact gagcaggggc aacaagcgac
     7381 agagtgcaat gcttcaggag atactggcaa ggataatagg actgaaatga tgcttgaaaa
     7441 tgatggtccc gttgaaaaga agactgaaga agacgatgtt gcgctcattg atggagacac
     7501 cctggaagcc gaccctgctg aaggagttgc gattgaagaa aatgtagtcg agattgttca
     7561 gagggcatca agtcctgttc tgcagcgtac aactgagagt tcagggatta ttgatgactt
     7621 acccgtggaa gcagaaacta cttcgtcaaa aaggaccgaa gaaatctccc atgcagaaat
     7681 ggagtacaag gagaaggttc aagaagctaa tgatctcata atggaagatg tagttaatac
     7741 caacaagaca tcgattgagc tttccattgc acaggttaag gttgagagaa atgatgttgc
     7801 aactgttgaa gtaagcaaca ttgttgatgc taaatcctct gatgatgtag tggaagcaat
     7861 tggcgtgtcg ggtgaccttg gaaaggatgt atctggtgag aagacagcag atgatcccca
     7921 tgttaaagag ggtgaagcgg aagtctttga aacatttaat gcaggatccc cgctcgacac
     7981 tggtgtcgaa tcatctaaaa aagctgatga cgtctccatg gtggaaacgg aaaaacaaga
     8041 aaatgatagc attgagagag gcacactgat ggagatggat gacaaatcct ctgaaaagtt
     8101 ggaggatagt gcaggttgcg ctgagaagga tattcaacta cctgatgcac aggatgaaac
     8161 aggcactcta gatgccaaca aagagattct caatgacgca gaaccaaaac ccgttgaaat
     8221 agtgaacaaa ggcatccaag tggtagctga aagtgagaat ctaaaaggat gtgctgacgc
     8281 attagaagtc aaatggaagg atcttcatgt tggccaggtt gatggaagaa gtgctgaaac
     8341 catcaatgca gaatccctgg ataatacaca ggccgagtcg tccaataaat tagacggacc
     8401 ctgtgaggac aaaagtttgc ataacgaaaa agatcacaaa cctccagctg agatcgttga
     8461 gtcaacaaag gatctttctg tttcagaagt cgctgcacaa aaaaatgtgg aagaaagaga
     8521 gattaaacct tctaaaatag ggtctgatgt ttctacagac caagaactag atgactcaac
     8581 aaatgagctt atcgtttcag aagttgcttc acaaagcccc atggaagaaa acgaaacgga
     8641 accttctaaa acaggaattg acgtctcaac aattaaagga attacaggga ccgatgcttc
     8701 aacatctata gaagaaaagg agtcagctaa agagctctct gtttcagaag ttgcttcaca
     8761 aagccacaag gaagaaaagg agaccgaacc ttctaaaaca gatgatgatt cgactgtctt
     8821 ggaacatgca actgtcaagg accaagatat cagtgaagaa atcttgagca gtgatgttgg
     8881 agtgcctgat cagtaggcta aatatttaaa caaacagaac attagccgta attatggttt
     8941 agcttgtatg gttgtagcta tgtaacaaat attgaaactg ctcttatatg cttaagctga
     9001 tgtgttaatt attggtttta ccatcttata gaggtatcca tgtctcttaa acatggtaaa
     9061 atatgatatg taagtgatgt ggtatgaaaa cttgaggaac aagtaaaagg gtttacttga
     9121 aaagcaagca agtaatttgc tggaatattt ttattagaaa agttttaatt atttgtttta
     9181 ggaaacttaa ttaggtctta tgtgcctata tataggaatt aggatatatg tttatgttat
     9241 tttcattcaa tttttaagtc aataaagttc tgtgttcttg tttactcttc a
//
LOCUS       XM_071829735            9267 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839616), transcript variant X7, mRNA.
ACCESSION   XM_071829735
VERSION     XM_071829735.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9267
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9267
                     /gene="LOC139839616"
                     /note="uncharacterized LOC139839616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839616"
     CDS             134..8872
                     /gene="LOC139839616"
                     /codon_start=1
                     /product="uncharacterized protein isoform X6"
                     /protein_id="XP_071685836.1"
                     /db_xref="GeneID:139839616"
                     /translation="MAATPQNVEMEAAKFLHKLIQESTDEPTKLATKLHVILQHMRTS
                     GKENSMPYQVISRAMETVIKRHGLDIDALMSSRQALTSGPLVGDSSISQSAGTKRSCP
                     SQHTTVENDSTKPIKTEDTSNAAVYSSKSLHGSGTTGHDAYQGSVNQHNSMKTVGSVA
                     GFSASYESTDPGNAAALALKGPAGKALDHEAGFSNVMASASKTLQGASSNSAAEMGVL
                     QNEALRDTGKLPVLQAPPVGPSMPFKEHHLKQLRAQCLVFLAFRNNMMPKKLHLEIAL
                     GNVFPKEDIKEHNHQKGKEQSVGPGFSNTGFVSETNLLKEAEKFDKINDKNDLPAGLP
                     EHNINSRKIEADMQAFEAKESQMPVTKVAQLDPNNIARHAGLFAMPDSQVNRHGQGHL
                     QGFPMNERHMVPKIANVLEKDVILAGNNNGGDDNSELSSSPALPKYTTSEKLIADCLK
                     RKAAADSNWAVKKQKTEQRILARVEKLKEAVSSSEDISAKTKSVIELKKLELLNLQRR
                     LRNEILNDFFRPTSNEIDRLKNIKKHRIGRRSKQIERHEQKMKEERQKRIRERQKDFF
                     GEMEQHRERLEDVFKNRRERVKGFNKYAREFHKRKERLHREKIDRIQREKINLLKIND
                     VEGYLRMVQDAKSDRVRQLLKETEKYLQKLGSKLKEAKVINRCFETDMSGVNDSGEFT
                     IENEDETDQAKHYMESNEKYYLMAHSIKETVAVQPSNLIGGKLREYQMNGLRWLLSLY
                     NNHLNGILADEMGLGKTVQVISLLCYLMENKNDRGPFLVVVPSSVLPGWESEINFWAP
                     SINKIVYSGPPEERRKLFKERIVQQKFNVLLTTYEYLMNKHDRPKLSKIHWHYVIIDE
                     GHRIKNASCKLNAELKHYHSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQ
                     WFNKPFESNADNSLEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERL
                     VRCEASAYQKLLMQRVDDSLGAFGATKARAVHNSVVELRNICNHPYLSQLHNEEVHEF
                     IPKHYLPNIIRFCGKLEMLDRLLPKLKATDHRILLFSTMTRLLDVMEDYLYWKQYRYL
                     RLDGHTSGGDRGALIDEFNRPGSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV
                     DLQAQARAHRIGQKKEVLVLRLETVKSVEEQVRASAEHKLGVANQSITAGFFDNNTSA
                     EDRREYLEALLRECKKEEAAPVLNDDALNNIIARSESEIDVFEEIDIKRQEEELSVWK
                     KLLVEQGGTSTEATPPLPPRLVTESELKSFCEAMKAIEVPKPVVVPGIGGKRSRELGN
                     LDIQHYGRGKRAREVRSYEEQWTEDEFDKLCQAENLSPPIHKEELKEQDLPVAKNESA
                     TVSATEAAVLPNVQPMQPLDRSVQQHKEINPPLKRGRGRPKKKPSGMSSTPIGYPASS
                     IPISSTPKSVPPTVQPLGVQTAPGSQLNITSPSGSKSTSSDTLTSANTNETMTVPPGF
                     QPVTDHPPGFHPTADHDHPPGFQPTVDHPPGFESLTVPPPGFKPIISPQQITPPPPGF
                     EPKMASPPPMAGSQSTPTVPAAPLPTSTLNSPSSHSIAASHSTSTSKADLPPGTLSSP
                     TLPSGPVSEPVVPPTSSDSQSTKSPAVTPGRGRGRGRGRGRGRGRGEIIDSEVVPQRR
                     GQMLHNVVLAIPNNQTSPVGKPETDSPVGPSTASEIGNKSSVSVSTNINAINSTPATA
                     SETGKKSSVSATTNINAQSSTPVTASETGNESLVSVSTNINTVSSTPVIGVADTPVQK
                     VSPSETSTADIASPKTPVPTAPVATSSTLTDTGSTMVGTTQTPVSVSVGSQFTELGTI
                     SPQTATPPVSTPIGADSATPNPVSKQGRGRGRKAAESGLGSPRLTRRKKKDLVEAQEK
                     TSNEPVQKKTRVSSGRKTVATRSMLRNEAQKGKDQPILTDDHSGKGNKLGQSSELSKF
                     ADASTVDNSLSTQEEKVEEPKGIAVATESVSKIRDAGKDTKPDELDPKTSINMEKGTE
                     SKSETLEGKGSKPSKEVEKLSHTEDTLATKVDLKEETEQEELAIACTASEDANKDNKT
                     EVIVSESECPVKKVSKTEENNPIIIGETLEADTAEGAIEDNVVEVVQKVETEAASSKS
                     TDEISHKESEFKEKDQGAEDPIREDVVDTIKTSLELSVTQGEGDDPANVEGSSVVERD
                     AKSSDDVVETSGVSDDVEKAVVEDENTTDDPPVKEVEDACQGETENEKLGDVSSIAEN
                     VVDVETIHAPPVSVDEMEGVETSVSESPLDTGVKPFEKADAASLVDTGKQEIDHSDRD
                     TVMEIDDKSSQKLENPESEESVKVLPDVQETIEVSETTDGAMPVNTEVTPFEENNNEM
                     PGESVIGAEQSTDSLPLQEDENGGLDVDKENLGEAITEQGQQATECNASGDTGKDNRT
                     EMMLENDGPVEKKTEEDDVALIDGDTLEADPAEGVAIEENVVEIVQRASSPVLQRTTE
                     SSGIIDDLPVEAETTSSKRTEEISHAEMEYKEKVQEANDLIMEDVVNTNKTSIELSIA
                     QVKVERNDVATVEVSNIVDAKSSDDVVEAIGVSGDLGKDVSGEKTADDPHVKEGEAEV
                     FETFNAGSPLDTGVESSKKADDVSMVETEKQENDSIERGTLMEMDDKSSEKLEDSAGC
                     AEKDIQLPDAQDETGTLDANKEILNDAEPKPVEIVNKGIQVVAESENLKGCADALEVK
                     WKDLHVGQVDGRSAETINAESLDNTQAESSNKLDGPCEDKSLHNEKDHKPPAEIVEST
                     KDLSVSEVAAQKNVEEREIKPSKIGSDVSTDQELDDSTNELIVSEVASQSPMEENETE
                     PSKTGIDVSTIKGITGTDASTSIEEKESAKELSVSEVASQSHKEEKETEPSKTDDDST
                     VLEHATVKDQDISEEILSSDVGVPDQ"
     misc_feature    1700..>2119
                     /gene="LOC139839616"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:464007"
     misc_feature    1913..>4240
                     /gene="LOC139839616"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    <4259..4867
                     /gene="LOC139839616"
                     /note="Sine oculis-binding protein; Region: SOBP;
                     pfam15279"
                     /db_xref="CDD:464609"
     misc_feature    <4637..5797
                     /gene="LOC139839616"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    5984..8791
                     /gene="LOC139839616"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     polyA_site      9267
                     /gene="LOC139839616"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagtcatat gaaatctgca tctatacgtt tcacataaag tgagcaatcc acttcattag
       61 gtagttctca gagcaaatat cgtgattcgt gatcctaatt aaagtagtga agtagtaata
      121 ctagtaaata aatatggcgg caactcccca aaatgttgag atggaagcag caaagttttt
      181 gcataagctt attcaggaat ctactgatga accgacgaaa ttggctacaa aattacacgt
      241 gattttgcag cacatgagaa ccagtggaaa ggagaattca atgccatacc aagttatatc
      301 aagggctatg gagacagtca taaaaagaca cggtcttgat atagatgctt taatgtcttc
      361 acgacaagca ttgactagcg gacctttagt cggagattca tccatatccc aatctgcagg
      421 tacaaaaaga tcatgtcctt cacagcatac cactgtggaa aatgattcca caaaacctat
      481 aaaaacggag gacacatcaa atgctgcagt ctattcaagc aaatccctgc atggttctgg
      541 tactacaggg catgacgctt atcagggatc tgtaaatcaa cacaactcta tgaagactgt
      601 tggatctgtt gccggttttt ctgcttcata tgaatctacg gaccctggaa acgctgcagc
      661 attggcgctt aaaggcccgg ctggtaaggc attggaccat gaagctgggt tctcaaatgt
      721 gatggcaagt gcaagtaaga cacttcaggg tgctagctcg aacagtgctg ctgaaatggg
      781 agtgcttcaa aatgaagctt taagagatac tggaaagttg ccggtgttgc aggcaccgcc
      841 agttggacct tccatgcctt ttaaggaaca tcatttaaag cagcttagag cacaatgtct
      901 tgtatttttg gccttcagga acaatatgat gccaaaaaag ttgcatcttg agattgccct
      961 aggaaatgtc tttcccaagg aagatattaa ggaacataat catcagaagg ggaaggagca
     1021 atctgttggt cctggtttct ccaacaccgg atttgtttca gaaacaaacc tattaaaaga
     1081 agccgagaaa tttgacaaga tcaatgataa aaatgaccta cccgctggtc ttcctgaaca
     1141 taatatcaat tcaaggaaga ttgaggcaga catgcaagct tttgaggcaa aagaatcgca
     1201 gatgcctgta actaaagtag cacagttaga tccaaataat attgcacgac acgctggcct
     1261 atttgctatg cctgatagcc aagtgaaccg gcatggtcag ggtcatttgc aaggttttcc
     1321 tatgaatgaa aggcacatgg tcccgaagat tgctaatgtt cttgaaaagg atgtaatact
     1381 tgcaggaaac aataatgggg gagatgataa ttctgaacta agttcttcac cagcattgcc
     1441 aaagtatact acatctgaaa agttgattgc agattgccta aagaggaaag ctgctgctga
     1501 ttctaactgg gctgtcaaaa agcagaaaac agagcagagg atcttggctc gtgttgagaa
     1561 gttaaaggaa gcagtcagct cttctgaaga catatcagca aaaaccaaga gtgtcattga
     1621 gctaaaaaaa cttgaactcc taaatctcca acgtcgccta cggaatgaga tcctgaatga
     1681 cttctttaga cctacatcta atgagattga tcgccttaaa aatatcaaaa aacataggat
     1741 tggtcgacga tcaaagcaaa tagagaggca tgagcagaaa atgaaagaag agcgtcaaaa
     1801 gagaattcga gaacgacaga aggacttctt tggtgaaatg gaacaacaca gggaaaggct
     1861 ggaagatgta tttaaaaata ggagagaacg agtgaaaggg tttaacaagt atgcaagaga
     1921 gtttcataaa aggaaggaaa gacttcatag ggagaagatt gatagaattc agcgggaaaa
     1981 gattaatctt ttgaaaatta atgacgttga gggttatctt cgaatggttc aggatgcaaa
     2041 gtcggatcga gtgaggcaac tattgaaaga gactgagaag tatcttcaga agcttggatc
     2101 taagctgaaa gaggcaaagg ttataaacag atgctttgag actgatatga gtggtgtaaa
     2161 tgacagtggt gaatttacaa ttgagaatga agatgaaact gaccaggcga agcattatat
     2221 ggagagcaat gagaagtact atctaatggc tcatagcatc aaagagactg tagcagtgca
     2281 gccatcaaat cttattggtg gaaaattgag agagtaccaa atgaatggat tacgatggct
     2341 actgtcactg tacaacaatc atttgaatgg cattcttgca gatgagatgg gcctagggaa
     2401 aactgttcag gttatttctc tactatgtta tctgatggaa aataaaaatg atagagggcc
     2461 atttttggtg gttgtgccat cctcagttct gcctggatgg gagtcggaga ttaacttctg
     2521 ggcccctagc atcaacaaaa ttgtctactc tggtcctcct gaggagcgtc ggaaattatt
     2581 taaggagaga attgttcagc aaaagttcaa tgttctattg acaacgtacg agtatctcat
     2641 gaacaaacat gacagaccaa agctgagcaa aatacattgg cattatgtca ttattgatga
     2701 aggtcatcgt ataaagaatg cttcgtgcaa gctcaatgct gaattgaagc attatcatag
     2761 ttcccataga ttgcttttga ctggaactcc tttgcagaat aatcttgagg aactatgggc
     2821 acttcttaac tttctattgc caaatatttt taattcgtca gaggattttt cccaatggtt
     2881 caacaaacca tttgaaagta atgcagacaa ctcacttgaa gaggctttgc tctctgagga
     2941 ggaaaatcta ttaattataa accgtcttca ccaagttttg cgcccatttg tgcttagaag
     3001 actgaaacac aaggttgaga atgagctacc tgaaaagata gaaagacttg taagatgtga
     3061 ggcttctgca tatcaaaagc tattgatgca gagggtagat gacagtcttg gtgcatttgg
     3121 tgctacaaag gctcgagcag tgcacaattc tgtcgttgaa ttacgaaata tttgcaatca
     3181 tccgtacctt agccagcttc ataatgaaga ggttcatgaa ttcattccaa agcattatct
     3241 tccaaatatt ataaggtttt gtgggaagct tgagatgtta gatagactgt tgcccaagct
     3301 aaaagctaca gatcatcgga tacttctctt ctcaacgatg acccggctcc ttgatgttat
     3361 ggaggattat ttgtattgga aacagtatcg gtaccttcgt ttagatggac acacatctgg
     3421 aggtgaccgt ggggcattaa ttgatgagtt caacagacca ggatcgccat atttcatatt
     3481 cctactcagt atacgtgctg gtggtgttgg agttaatctt caagctgcgg atacagtcat
     3541 tatttttgac acagattgga atccacaggt tgacctgcaa gcacaggcta gggctcacag
     3601 gataggtcag aagaaggaag tactcgttct tcggttagaa actgttaaat cggtagagga
     3661 gcaagttcga gcttcagctg agcacaaact tggagttgct aatcagagca ttactgctgg
     3721 gttttttgac aataacacaa gtgcggaaga ccgaagagaa tacttggagg ctctgctgcg
     3781 tgagtgtaag aaagaggaag cggctcctgt cttaaatgat gatgctctca ataatatcat
     3841 agccaggagt gagtctgaaa ttgacgtatt tgaggaaatt gatataaaac ggcaagaaga
     3901 ggagctgtct gtatggaaaa agttgttagt tgagcaaggg ggaacaagta cagaagccac
     3961 acctcccctt cctcctaggc ttgtgacgga aagtgaattg aagtcattct gtgaagctat
     4021 gaaggcaatt gaagttccta aacctgtagt tgtcccaggt atcggaggta aaaggagtag
     4081 agagcttggg aacttagata ttcaacatta tggaagggga aagcgtgcac gagaggtgcg
     4141 ttcttatgag gagcaatgga cggaagacga atttgataag ctatgtcaag ctgaaaatct
     4201 cagccctcct atccacaagg aagaactaaa agaacaggat ttgcccgttg ccaaaaatga
     4261 atctgccacg gtcagtgcta cagaagctgc agtgttgcca aacgtacagc caatgcaacc
     4321 tttggatcgc agcgttcaac agcacaagga gataaatccc ccattaaaac ggggtcgtgg
     4381 taggcctaaa aagaaaccat cagggatgtc ttcaactcca attggttatc cagcatcttc
     4441 aatacctatc tcttctactc ctaaaagtgt tcctccaact gtccaaccgt tgggtgtaca
     4501 aacggctcct ggttctcagt tgaatattac cagcccttct ggttccaagt caacttcctc
     4561 tgatacattg acatctgcta atactaatga gaccatgact gtgcctcctg gttttcagcc
     4621 agttacagat catcctcctg gttttcatcc aactgcagat catgatcatc ctcctggttt
     4681 tcagccaact gtagatcatc ctcctggttt tgaatcgttg accgttcccc ctccaggctt
     4741 taagcccatt atctctcctc agcagataac ccctccaccc cctggattcg aaccgaagat
     4801 ggcatcaccc cctcccatgg caggttctca gtcaacccct actgtccctg ctgcaccctt
     4861 accaaccagc accttgaatt ctcccagttc tcattcgatt gccgcatctc attctacctc
     4921 tacatccaag gcagatctcc ctcctggcac tctatcaagc cctactttac cttcgggtcc
     4981 cgtttcagag ccagtggtcc ccccaacctc atccgattcc cagtctacta aatctcctgc
     5041 agtgacacct ggcagaggca gaggtcgggg acgtggtcgg ggtcgaggta gaggccgtgg
     5101 tgaaataatt gattctgaag ttgttcccca acgcaggggt cagatgctgc ataatgtggt
     5161 attagctatt cccaataatc aaacttctcc agttggcaag ccagaaacag attccccagt
     5221 gggtccctct actgcttctg aaataggcaa caagtcttcg gtttccgtct ccactaatat
     5281 aaatgctatc aatagcacac cagctactgc ttctgaaaca ggcaaaaagt cttcggtttc
     5341 tgccaccact aatataaatg ctcagagtag cacaccagtt actgcttctg aaacaggcaa
     5401 cgagtccttg gtttctgtct ccactaatat aaatactgtc agtagcacac cagttatagg
     5461 ggtagctgat actcctgtac aaaaagtatc cccttctgaa acctccactg ctgatatcgc
     5521 atcaccaaaa acaccagtcc ctactgcacc tgtcgctaca tcttctacgt tgacagacac
     5581 cggtagtacc atggtgggga ccacacagac acctgtttcc gtttctgtag gttctcagtt
     5641 cactgagctt ggaacaataa gtcctcagac agctacacca cctgtatcta ctccgattgg
     5701 cgctgattct gcaactccta atcctgtatc aaagcaaggt cgaggacgcg gaagaaaggc
     5761 ggctgagagt gggttagggt cacctcgcct cacgcgaagg aagaaaaagg atttggtaga
     5821 agctcaggag aaaacatcta atgaaccagt acagaagaaa acacgagtat cttctggtag
     5881 aaaaaccgta gctacaagaa gtatgctacg aaatgaagct cagaaaggga aagatcaacc
     5941 tatcctaaca gatgaccatt ccggcaaagg taataagttg ggtcaatcgt cagaattaag
     6001 caagtttgcc gatgcaagta cagtagacaa tagcttaagt acccaagagg agaaggttga
     6061 agagccaaaa ggtattgcag tggccactga gtcagtttca aagattcgtg atgctggtaa
     6121 agataccaag cctgacgaat tggatcccaa gacatcaatt aatatggaga agggaacaga
     6181 gtccaaatca gagacgctgg aggggaaagg gtccaaaccc tctaaagaag ttgagaagtt
     6241 gtcccacact gaggatactt tagccacaaa agttgatctc aaggaagaga ctgagcaaga
     6301 ggaactagca atagcttgca ctgcttcaga agatgctaac aaagataata aaactgaagt
     6361 tatcgtgtct gaaagcgaat gtcctgtcaa aaaggtatcc aagactgaag aaaacaatcc
     6421 tataatcatt ggagagaccc tggaggctga cactgctgaa ggagccattg aagataatgt
     6481 agttgaagtt gttcaaaagg tggaaactga agctgcctct tcaaaaagca ccgatgagat
     6541 ctcccataaa gaatctgagt ttaaggagaa ggatcaagga gctgaagatc ccataaggga
     6601 agatgtggtt gataccatca agacatcgtt agagctttct gttacacagg gcgagggaga
     6661 tgatcctgca aatgttgaag gaagcagtgt agttgaaaga gatgctaaat catctgacga
     6721 tgtagtggaa acaagtggtg tgtcagatga cgttgaaaaa gctgtagttg aggatgagaa
     6781 tacaacagat gatccccctg ttaaagaagt tgaagatgcc tgtcaaggag aaactgagaa
     6841 tgagaaattg ggagatgtta gttccattgc agaaaatgta gttgacgtgg agacaataca
     6901 tgctcctccc gtcagtgtgg atgaaatgga aggtgttgaa acaagtgttt cagaatctcc
     6961 attagacaca ggtgtcaaac cttttgaaaa agctgatgct gcctccttgg tggatacggg
     7021 taaacaagaa attgaccaca gtgacagaga tacggtgatg gagatagatg acaaatcctc
     7081 tcaaaagttg gagaaccctg aaagtgagga atcagtaaaa gtacttcctg atgtacagga
     7141 gacaattgag gtttctgaaa ccactgatgg tgctatgcct gtgaacacgg aagtcacccc
     7201 ttttgaagag aacaataatg aaatgccggg agagtctgtt attggtgctg aacagagtac
     7261 agattctctt cctcttcaag aggatgaaaa cggcggcctt gatgttgaca aagagaatct
     7321 cggtgaggca ataactgagc aggggcaaca agcgacagag tgcaatgctt caggagatac
     7381 tggcaaggat aataggactg aaatgatgct tgaaaatgat ggtcccgttg aaaagaagac
     7441 tgaagaagac gatgttgcgc tcattgatgg agacaccctg gaagccgacc ctgctgaagg
     7501 agttgcgatt gaagaaaatg tagtcgagat tgttcagagg gcatcaagtc ctgttctgca
     7561 gcgtacaact gagagttcag ggattattga tgacttaccc gtggaagcag aaactacttc
     7621 gtcaaaaagg accgaagaaa tctcccatgc agaaatggag tacaaggaga aggttcaaga
     7681 agctaatgat ctcataatgg aagatgtagt taataccaac aagacatcga ttgagctttc
     7741 cattgcacag gttaaggttg agagaaatga tgttgcaact gttgaagtaa gcaacattgt
     7801 tgatgctaaa tcctctgatg atgtagtgga agcaattggc gtgtcgggtg accttggaaa
     7861 ggatgtatct ggtgagaaga cagcagatga tccccatgtt aaagagggtg aagcggaagt
     7921 ctttgaaaca tttaatgcag gatccccgct cgacactggt gtcgaatcat ctaaaaaagc
     7981 tgatgacgtc tccatggtgg aaacggaaaa acaagaaaat gatagcattg agagaggcac
     8041 actgatggag atggatgaca aatcctctga aaagttggag gatagtgcag gttgcgctga
     8101 gaaggatatt caactacctg atgcacagga tgaaacaggc actctagatg ccaacaaaga
     8161 gattctcaat gacgcagaac caaaacccgt tgaaatagtg aacaaaggca tccaagtggt
     8221 agctgaaagt gagaatctaa aaggatgtgc tgacgcatta gaagtcaaat ggaaggatct
     8281 tcatgttggc caggttgatg gaagaagtgc tgaaaccatc aatgcagaat ccctggataa
     8341 tacacaggcc gagtcgtcca ataaattaga cggaccctgt gaggacaaaa gtttgcataa
     8401 cgaaaaagat cacaaacctc cagctgagat cgttgagtca acaaaggatc tttctgtttc
     8461 agaagtcgct gcacaaaaaa atgtggaaga aagagagatt aaaccttcta aaatagggtc
     8521 tgatgtttct acagaccaag aactagatga ctcaacaaat gagcttatcg tttcagaagt
     8581 tgcttcacaa agccccatgg aagaaaacga aacggaacct tctaaaacag gaattgacgt
     8641 ctcaacaatt aaaggaatta cagggaccga tgcttcaaca tctatagaag aaaaggagtc
     8701 agctaaagag ctctctgttt cagaagttgc ttcacaaagc cacaaggaag aaaaggagac
     8761 cgaaccttct aaaacagatg atgattcgac tgtcttggaa catgcaactg tcaaggacca
     8821 agatatcagt gaagaaatct tgagcagtga tgttggagtg cctgatcagt aggctaaata
     8881 tttaaacaaa cagaacatta gccgtaatta tggtttagct tgtatggttg tagctatgta
     8941 acaaatattg aaactgctct tatatgctta agctgatgtg ttaattattg gttttaccat
     9001 cttatagagg tatccatgtc tcttaaacat ggtaaaatat gatatgtaag tgatgtggta
     9061 tgaaaacttg aggaacaagt aaaagggttt acttgaaaag caagcaagta atttgctgga
     9121 atatttttat tagaaaagtt ttaattattt gttttaggaa acttaattag gtcttatgtg
     9181 cctatatata ggaattagga tatatgttta tgttattttc attcaatttt taagtcaata
     9241 aagttctgtg ttcttgttta ctcttca
//
LOCUS       XM_071829736            9258 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839616), transcript variant X8, mRNA.
ACCESSION   XM_071829736
VERSION     XM_071829736.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9258
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..9258
                     /gene="LOC139839616"
                     /note="uncharacterized LOC139839616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839616"
     CDS             134..8863
                     /gene="LOC139839616"
                     /codon_start=1
                     /product="uncharacterized protein isoform X7"
                     /protein_id="XP_071685837.1"
                     /db_xref="GeneID:139839616"
                     /translation="MAATPQNVEMEAAKFLHKLIQESTDEPTKLATKLHVILQHMRTS
                     GKENSMPYQVISRAMETVIKRHGLDIDALMSSRQALTSGPLVGDSSISQSAGTKRSCP
                     SQHTTVENDSTKPIKTEDTSNAAVYSSKSLHGSGTTGHDAYQGSVNQHNSMKTVGSVA
                     GFSASYESTDPGNAAALALKGPAGKALDHEAGFSNVMASASKTLQGASSNSAAEMGVL
                     QNEALRDTGKLPVLQAPPVGPSMPFKEHHLKQLRAQCLVFLAFRNNMMPKKLHLEIAL
                     GNVFPKEDIKEHNHQKGKEQSVGPGFSNTGFVSETNLLKEAEKFDKINDKNDLPAGLP
                     EHNINSRKIEADMQAFEAKESQMPVTKVAQLDPNNIARHAGLFAMPDSQVNRHGQGHL
                     QGFPMNERHMVPKIANVLEKDVILAGNNNGGDDNSELSSSPALPKYTTSEKLIADCLK
                     RKAAADSNWAVKKQKTEQRILARVEKLKEAVSSSEDISAKTKSVIELKKLELLNLQRR
                     LRNEILNDFFRPTSNEIDRLKNIKKHRIGRRSKQIERHEQKMKEERQKRIRERQKDFF
                     GEMEQHRERLEDVFKNRRERVKGFNKYAREFHKRKERLHREKIDRIQREKINLLKIND
                     VEGYLRMVQDAKSDRVRQLLKETEKYLQKLGSKLKEAKVINRCFETDMSGVNDSGEFT
                     IENEDETDQAKHYMESNEKYYLMAHSIKETVAVQPSNLIGGKLREYQMNGLRWLLSLY
                     NNHLNGILADEMGLGKTVQVISLLCYLMENKNDRGPFLVVVPSSVLPGWESEINFWAP
                     SINKIVYSGPPEERRKLFKERIVQQKFNVLLTTYEYLMNKHDRPKLSKIHWHYVIIDE
                     GHRIKNASCKLNAELKHYHSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQ
                     WFNKPFESNADNSLEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERL
                     VRCEASAYQKLLMQRVDDSLGAFGATKARAVHNSVVELRNICNHPYLSQLHNEEVHEF
                     IPKHYLPNIIRFCGKLEMLDRLLPKLKATDHRILLFSTMTRLLDVMEDYLYWKQYRYL
                     RLDGHTSGGDRGALIDEFNRPGSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV
                     DLQAQARAHRIGQKKEVLVLRLETVKSVEEQVRASAEHKLGVANQSITAGFFDNNTSA
                     EDRREYLEALLRECKKEEAAPVLNDDALNNIIARSESEIDVFEEIDIKRQEEELSVWK
                     KLLVEQGGTSTEATPPLPPRLVTESELKSFCEAMKAIEVPKPVVVPGIGGKRSRELGN
                     LDIQHYGRGKRAREVRSYEEQWTEDEFDKLCQAENLSPPIHKEELKEQDLPVAKNESA
                     TVSATEAAVLPNVQPMQPLDRSVQQHKEINPPLKRGRGRPKKKPSGMSSTPIGYPASS
                     IPISSTPKSVPPTVQPLGVQTAPGSQLNITSPSGSKSTSSDTLTSANTNETMTVPPGF
                     QPVTDHPPGFHPTADHDHPPGFQPTVDHPPGFESLTVPPPGFKPIISPQQITPPPPGF
                     EPKMASPPPMAGSQSTPTVPAAPLPTSTLNSPSSHSIAASHSTSTSKADLPPGTLSSP
                     TLPSGPVSEPVVPPTSSDSQSTKSPAVTPGRGRGRGRGRGRGRGRGEIIDSEVVPQRR
                     GQMLHNVVLAIPNNQTSPVGKPETDSPVGPSTASEIGNKSSVSVSTNINAINSTPATA
                     SETGKKSSVSATTNINAQSSTPVTASETGNESLVSVSTNINTVSSTPVIGVADTPVQK
                     VSPSETSTADIASPKTPVPTAPVATSSTLTDTGSTMVGTTQTPVSVSVGSQFTELGTI
                     SPQTATPPVSTPIGADSATPNPVSKQGRGRGRKAAESGLGSPRLTRRKKKDLVEAQEK
                     TSNEPVQKKTRVSSGRKTVATRSMLRNEAQKGKDQPILTDDHSGKGNKLGQSSELSKF
                     ADASTVDNSLSTQEEKVEEPKGIAVATESVSKIRDAGKDTKPDELDPKTSINMEKGTE
                     SKSETLEGKGSKPSKEVEKLSHTEDTLATKVDLKEETEQEELAIACTASEDANKDNKT
                     EVIVSESECPVKKTEENNPIIIGETLEADTAEGAIEDNVVEVVQKVETEAASSKSTDE
                     ISHKESEFKEKDQGAEDPIREDVVDTIKTSLELSVTQGEGDDPANVEGSSVVERDAKS
                     SDDVVETSGVSDDVEKAVVEDENTTDDPPVKEVEDACQGETENEKLGDVSSIAENVVD
                     VETIHAPPVSVDEMEGVETSVSESPLDTGVKPFEKADAASLVDTGKQEIDHSDRDTVM
                     EIDDKSSQKLENPESEESVKVLPDVQETIEVSETTDGAMPVNTEVTPFEENNNEMPGE
                     SVIGAEQSTDSLPLQEDENGGLDVDKENLGEAITEQGQQATECNASGDTGKDNRTEMM
                     LENDGPVEKKTEEDDVALIDGDTLEADPAEGVAIEENVVEIVQRASSPVLQRTTESSG
                     IIDDLPVEAETTSSKRTEEISHAEMEYKEKVQEANDLIMEDVVNTNKTSIELSIAQVK
                     VERNDVATVEVSNIVDAKSSDDVVEAIGVSGDLGKDVSGEKTADDPHVKEGEAEVFET
                     FNAGSPLDTGVESSKKADDVSMVETEKQENDSIERGTLMEMDDKSSEKLEDSAGCAEK
                     DIQLPDAQDETGTLDANKEILNDAEPKPVEIVNKGIQVVAESENLKGCADALEVKWKD
                     LHVGQVDGRSAETINAESLDNTQAESSNKLDGPCEDKSLHNEKDHKPPAEIVESTKDL
                     SVSEVAAQKNVEEREIKPSKIGSDVSTDQELDDSTNELIVSEVASQSPMEENETEPSK
                     TGIDVSTIKGITGTDASTSIEEKESAKELSVSEVASQSHKEEKETEPSKTDDDSTVLE
                     HATVKDQDISEEILSSDVGVPDQ"
     misc_feature    1700..>2119
                     /gene="LOC139839616"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:464007"
     misc_feature    1913..>4240
                     /gene="LOC139839616"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    <4259..4867
                     /gene="LOC139839616"
                     /note="Sine oculis-binding protein; Region: SOBP;
                     pfam15279"
                     /db_xref="CDD:464609"
     misc_feature    <4637..5797
                     /gene="LOC139839616"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    <5753..6838
                     /gene="LOC139839616"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    6521..>8827
                     /gene="LOC139839616"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     polyA_site      9258
                     /gene="LOC139839616"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagtcatat gaaatctgca tctatacgtt tcacataaag tgagcaatcc acttcattag
       61 gtagttctca gagcaaatat cgtgattcgt gatcctaatt aaagtagtga agtagtaata
      121 ctagtaaata aatatggcgg caactcccca aaatgttgag atggaagcag caaagttttt
      181 gcataagctt attcaggaat ctactgatga accgacgaaa ttggctacaa aattacacgt
      241 gattttgcag cacatgagaa ccagtggaaa ggagaattca atgccatacc aagttatatc
      301 aagggctatg gagacagtca taaaaagaca cggtcttgat atagatgctt taatgtcttc
      361 acgacaagca ttgactagcg gacctttagt cggagattca tccatatccc aatctgcagg
      421 tacaaaaaga tcatgtcctt cacagcatac cactgtggaa aatgattcca caaaacctat
      481 aaaaacggag gacacatcaa atgctgcagt ctattcaagc aaatccctgc atggttctgg
      541 tactacaggg catgacgctt atcagggatc tgtaaatcaa cacaactcta tgaagactgt
      601 tggatctgtt gccggttttt ctgcttcata tgaatctacg gaccctggaa acgctgcagc
      661 attggcgctt aaaggcccgg ctggtaaggc attggaccat gaagctgggt tctcaaatgt
      721 gatggcaagt gcaagtaaga cacttcaggg tgctagctcg aacagtgctg ctgaaatggg
      781 agtgcttcaa aatgaagctt taagagatac tggaaagttg ccggtgttgc aggcaccgcc
      841 agttggacct tccatgcctt ttaaggaaca tcatttaaag cagcttagag cacaatgtct
      901 tgtatttttg gccttcagga acaatatgat gccaaaaaag ttgcatcttg agattgccct
      961 aggaaatgtc tttcccaagg aagatattaa ggaacataat catcagaagg ggaaggagca
     1021 atctgttggt cctggtttct ccaacaccgg atttgtttca gaaacaaacc tattaaaaga
     1081 agccgagaaa tttgacaaga tcaatgataa aaatgaccta cccgctggtc ttcctgaaca
     1141 taatatcaat tcaaggaaga ttgaggcaga catgcaagct tttgaggcaa aagaatcgca
     1201 gatgcctgta actaaagtag cacagttaga tccaaataat attgcacgac acgctggcct
     1261 atttgctatg cctgatagcc aagtgaaccg gcatggtcag ggtcatttgc aaggttttcc
     1321 tatgaatgaa aggcacatgg tcccgaagat tgctaatgtt cttgaaaagg atgtaatact
     1381 tgcaggaaac aataatgggg gagatgataa ttctgaacta agttcttcac cagcattgcc
     1441 aaagtatact acatctgaaa agttgattgc agattgccta aagaggaaag ctgctgctga
     1501 ttctaactgg gctgtcaaaa agcagaaaac agagcagagg atcttggctc gtgttgagaa
     1561 gttaaaggaa gcagtcagct cttctgaaga catatcagca aaaaccaaga gtgtcattga
     1621 gctaaaaaaa cttgaactcc taaatctcca acgtcgccta cggaatgaga tcctgaatga
     1681 cttctttaga cctacatcta atgagattga tcgccttaaa aatatcaaaa aacataggat
     1741 tggtcgacga tcaaagcaaa tagagaggca tgagcagaaa atgaaagaag agcgtcaaaa
     1801 gagaattcga gaacgacaga aggacttctt tggtgaaatg gaacaacaca gggaaaggct
     1861 ggaagatgta tttaaaaata ggagagaacg agtgaaaggg tttaacaagt atgcaagaga
     1921 gtttcataaa aggaaggaaa gacttcatag ggagaagatt gatagaattc agcgggaaaa
     1981 gattaatctt ttgaaaatta atgacgttga gggttatctt cgaatggttc aggatgcaaa
     2041 gtcggatcga gtgaggcaac tattgaaaga gactgagaag tatcttcaga agcttggatc
     2101 taagctgaaa gaggcaaagg ttataaacag atgctttgag actgatatga gtggtgtaaa
     2161 tgacagtggt gaatttacaa ttgagaatga agatgaaact gaccaggcga agcattatat
     2221 ggagagcaat gagaagtact atctaatggc tcatagcatc aaagagactg tagcagtgca
     2281 gccatcaaat cttattggtg gaaaattgag agagtaccaa atgaatggat tacgatggct
     2341 actgtcactg tacaacaatc atttgaatgg cattcttgca gatgagatgg gcctagggaa
     2401 aactgttcag gttatttctc tactatgtta tctgatggaa aataaaaatg atagagggcc
     2461 atttttggtg gttgtgccat cctcagttct gcctggatgg gagtcggaga ttaacttctg
     2521 ggcccctagc atcaacaaaa ttgtctactc tggtcctcct gaggagcgtc ggaaattatt
     2581 taaggagaga attgttcagc aaaagttcaa tgttctattg acaacgtacg agtatctcat
     2641 gaacaaacat gacagaccaa agctgagcaa aatacattgg cattatgtca ttattgatga
     2701 aggtcatcgt ataaagaatg cttcgtgcaa gctcaatgct gaattgaagc attatcatag
     2761 ttcccataga ttgcttttga ctggaactcc tttgcagaat aatcttgagg aactatgggc
     2821 acttcttaac tttctattgc caaatatttt taattcgtca gaggattttt cccaatggtt
     2881 caacaaacca tttgaaagta atgcagacaa ctcacttgaa gaggctttgc tctctgagga
     2941 ggaaaatcta ttaattataa accgtcttca ccaagttttg cgcccatttg tgcttagaag
     3001 actgaaacac aaggttgaga atgagctacc tgaaaagata gaaagacttg taagatgtga
     3061 ggcttctgca tatcaaaagc tattgatgca gagggtagat gacagtcttg gtgcatttgg
     3121 tgctacaaag gctcgagcag tgcacaattc tgtcgttgaa ttacgaaata tttgcaatca
     3181 tccgtacctt agccagcttc ataatgaaga ggttcatgaa ttcattccaa agcattatct
     3241 tccaaatatt ataaggtttt gtgggaagct tgagatgtta gatagactgt tgcccaagct
     3301 aaaagctaca gatcatcgga tacttctctt ctcaacgatg acccggctcc ttgatgttat
     3361 ggaggattat ttgtattgga aacagtatcg gtaccttcgt ttagatggac acacatctgg
     3421 aggtgaccgt ggggcattaa ttgatgagtt caacagacca ggatcgccat atttcatatt
     3481 cctactcagt atacgtgctg gtggtgttgg agttaatctt caagctgcgg atacagtcat
     3541 tatttttgac acagattgga atccacaggt tgacctgcaa gcacaggcta gggctcacag
     3601 gataggtcag aagaaggaag tactcgttct tcggttagaa actgttaaat cggtagagga
     3661 gcaagttcga gcttcagctg agcacaaact tggagttgct aatcagagca ttactgctgg
     3721 gttttttgac aataacacaa gtgcggaaga ccgaagagaa tacttggagg ctctgctgcg
     3781 tgagtgtaag aaagaggaag cggctcctgt cttaaatgat gatgctctca ataatatcat
     3841 agccaggagt gagtctgaaa ttgacgtatt tgaggaaatt gatataaaac ggcaagaaga
     3901 ggagctgtct gtatggaaaa agttgttagt tgagcaaggg ggaacaagta cagaagccac
     3961 acctcccctt cctcctaggc ttgtgacgga aagtgaattg aagtcattct gtgaagctat
     4021 gaaggcaatt gaagttccta aacctgtagt tgtcccaggt atcggaggta aaaggagtag
     4081 agagcttggg aacttagata ttcaacatta tggaagggga aagcgtgcac gagaggtgcg
     4141 ttcttatgag gagcaatgga cggaagacga atttgataag ctatgtcaag ctgaaaatct
     4201 cagccctcct atccacaagg aagaactaaa agaacaggat ttgcccgttg ccaaaaatga
     4261 atctgccacg gtcagtgcta cagaagctgc agtgttgcca aacgtacagc caatgcaacc
     4321 tttggatcgc agcgttcaac agcacaagga gataaatccc ccattaaaac ggggtcgtgg
     4381 taggcctaaa aagaaaccat cagggatgtc ttcaactcca attggttatc cagcatcttc
     4441 aatacctatc tcttctactc ctaaaagtgt tcctccaact gtccaaccgt tgggtgtaca
     4501 aacggctcct ggttctcagt tgaatattac cagcccttct ggttccaagt caacttcctc
     4561 tgatacattg acatctgcta atactaatga gaccatgact gtgcctcctg gttttcagcc
     4621 agttacagat catcctcctg gttttcatcc aactgcagat catgatcatc ctcctggttt
     4681 tcagccaact gtagatcatc ctcctggttt tgaatcgttg accgttcccc ctccaggctt
     4741 taagcccatt atctctcctc agcagataac ccctccaccc cctggattcg aaccgaagat
     4801 ggcatcaccc cctcccatgg caggttctca gtcaacccct actgtccctg ctgcaccctt
     4861 accaaccagc accttgaatt ctcccagttc tcattcgatt gccgcatctc attctacctc
     4921 tacatccaag gcagatctcc ctcctggcac tctatcaagc cctactttac cttcgggtcc
     4981 cgtttcagag ccagtggtcc ccccaacctc atccgattcc cagtctacta aatctcctgc
     5041 agtgacacct ggcagaggca gaggtcgggg acgtggtcgg ggtcgaggta gaggccgtgg
     5101 tgaaataatt gattctgaag ttgttcccca acgcaggggt cagatgctgc ataatgtggt
     5161 attagctatt cccaataatc aaacttctcc agttggcaag ccagaaacag attccccagt
     5221 gggtccctct actgcttctg aaataggcaa caagtcttcg gtttccgtct ccactaatat
     5281 aaatgctatc aatagcacac cagctactgc ttctgaaaca ggcaaaaagt cttcggtttc
     5341 tgccaccact aatataaatg ctcagagtag cacaccagtt actgcttctg aaacaggcaa
     5401 cgagtccttg gtttctgtct ccactaatat aaatactgtc agtagcacac cagttatagg
     5461 ggtagctgat actcctgtac aaaaagtatc cccttctgaa acctccactg ctgatatcgc
     5521 atcaccaaaa acaccagtcc ctactgcacc tgtcgctaca tcttctacgt tgacagacac
     5581 cggtagtacc atggtgggga ccacacagac acctgtttcc gtttctgtag gttctcagtt
     5641 cactgagctt ggaacaataa gtcctcagac agctacacca cctgtatcta ctccgattgg
     5701 cgctgattct gcaactccta atcctgtatc aaagcaaggt cgaggacgcg gaagaaaggc
     5761 ggctgagagt gggttagggt cacctcgcct cacgcgaagg aagaaaaagg atttggtaga
     5821 agctcaggag aaaacatcta atgaaccagt acagaagaaa acacgagtat cttctggtag
     5881 aaaaaccgta gctacaagaa gtatgctacg aaatgaagct cagaaaggga aagatcaacc
     5941 tatcctaaca gatgaccatt ccggcaaagg taataagttg ggtcaatcgt cagaattaag
     6001 caagtttgcc gatgcaagta cagtagacaa tagcttaagt acccaagagg agaaggttga
     6061 agagccaaaa ggtattgcag tggccactga gtcagtttca aagattcgtg atgctggtaa
     6121 agataccaag cctgacgaat tggatcccaa gacatcaatt aatatggaga agggaacaga
     6181 gtccaaatca gagacgctgg aggggaaagg gtccaaaccc tctaaagaag ttgagaagtt
     6241 gtcccacact gaggatactt tagccacaaa agttgatctc aaggaagaga ctgagcaaga
     6301 ggaactagca atagcttgca ctgcttcaga agatgctaac aaagataata aaactgaagt
     6361 tatcgtgtct gaaagcgaat gtcctgtcaa aaagactgaa gaaaacaatc ctataatcat
     6421 tggagagacc ctggaggctg acactgctga aggagccatt gaagataatg tagttgaagt
     6481 tgttcaaaag gtggaaactg aagctgcctc ttcaaaaagc accgatgaga tctcccataa
     6541 agaatctgag tttaaggaga aggatcaagg agctgaagat cccataaggg aagatgtggt
     6601 tgataccatc aagacatcgt tagagctttc tgttacacag ggcgagggag atgatcctgc
     6661 aaatgttgaa ggaagcagtg tagttgaaag agatgctaaa tcatctgacg atgtagtgga
     6721 aacaagtggt gtgtcagatg acgttgaaaa agctgtagtt gaggatgaga atacaacaga
     6781 tgatccccct gttaaagaag ttgaagatgc ctgtcaagga gaaactgaga atgagaaatt
     6841 gggagatgtt agttccattg cagaaaatgt agttgacgtg gagacaatac atgctcctcc
     6901 cgtcagtgtg gatgaaatgg aaggtgttga aacaagtgtt tcagaatctc cattagacac
     6961 aggtgtcaaa ccttttgaaa aagctgatgc tgcctccttg gtggatacgg gtaaacaaga
     7021 aattgaccac agtgacagag atacggtgat ggagatagat gacaaatcct ctcaaaagtt
     7081 ggagaaccct gaaagtgagg aatcagtaaa agtacttcct gatgtacagg agacaattga
     7141 ggtttctgaa accactgatg gtgctatgcc tgtgaacacg gaagtcaccc cttttgaaga
     7201 gaacaataat gaaatgccgg gagagtctgt tattggtgct gaacagagta cagattctct
     7261 tcctcttcaa gaggatgaaa acggcggcct tgatgttgac aaagagaatc tcggtgaggc
     7321 aataactgag caggggcaac aagcgacaga gtgcaatgct tcaggagata ctggcaagga
     7381 taataggact gaaatgatgc ttgaaaatga tggtcccgtt gaaaagaaga ctgaagaaga
     7441 cgatgttgcg ctcattgatg gagacaccct ggaagccgac cctgctgaag gagttgcgat
     7501 tgaagaaaat gtagtcgaga ttgttcagag ggcatcaagt cctgttctgc agcgtacaac
     7561 tgagagttca gggattattg atgacttacc cgtggaagca gaaactactt cgtcaaaaag
     7621 gaccgaagaa atctcccatg cagaaatgga gtacaaggag aaggttcaag aagctaatga
     7681 tctcataatg gaagatgtag ttaataccaa caagacatcg attgagcttt ccattgcaca
     7741 ggttaaggtt gagagaaatg atgttgcaac tgttgaagta agcaacattg ttgatgctaa
     7801 atcctctgat gatgtagtgg aagcaattgg cgtgtcgggt gaccttggaa aggatgtatc
     7861 tggtgagaag acagcagatg atccccatgt taaagagggt gaagcggaag tctttgaaac
     7921 atttaatgca ggatccccgc tcgacactgg tgtcgaatca tctaaaaaag ctgatgacgt
     7981 ctccatggtg gaaacggaaa aacaagaaaa tgatagcatt gagagaggca cactgatgga
     8041 gatggatgac aaatcctctg aaaagttgga ggatagtgca ggttgcgctg agaaggatat
     8101 tcaactacct gatgcacagg atgaaacagg cactctagat gccaacaaag agattctcaa
     8161 tgacgcagaa ccaaaacccg ttgaaatagt gaacaaaggc atccaagtgg tagctgaaag
     8221 tgagaatcta aaaggatgtg ctgacgcatt agaagtcaaa tggaaggatc ttcatgttgg
     8281 ccaggttgat ggaagaagtg ctgaaaccat caatgcagaa tccctggata atacacaggc
     8341 cgagtcgtcc aataaattag acggaccctg tgaggacaaa agtttgcata acgaaaaaga
     8401 tcacaaacct ccagctgaga tcgttgagtc aacaaaggat ctttctgttt cagaagtcgc
     8461 tgcacaaaaa aatgtggaag aaagagagat taaaccttct aaaatagggt ctgatgtttc
     8521 tacagaccaa gaactagatg actcaacaaa tgagcttatc gtttcagaag ttgcttcaca
     8581 aagccccatg gaagaaaacg aaacggaacc ttctaaaaca ggaattgacg tctcaacaat
     8641 taaaggaatt acagggaccg atgcttcaac atctatagaa gaaaaggagt cagctaaaga
     8701 gctctctgtt tcagaagttg cttcacaaag ccacaaggaa gaaaaggaga ccgaaccttc
     8761 taaaacagat gatgattcga ctgtcttgga acatgcaact gtcaaggacc aagatatcag
     8821 tgaagaaatc ttgagcagtg atgttggagt gcctgatcag taggctaaat atttaaacaa
     8881 acagaacatt agccgtaatt atggtttagc ttgtatggtt gtagctatgt aacaaatatt
     8941 gaaactgctc ttatatgctt aagctgatgt gttaattatt ggttttacca tcttatagag
     9001 gtatccatgt ctcttaaaca tggtaaaata tgatatgtaa gtgatgtggt atgaaaactt
     9061 gaggaacaag taaaagggtt tacttgaaaa gcaagcaagt aatttgctgg aatattttta
     9121 ttagaaaagt tttaattatt tgttttagga aacttaatta ggtcttatgt gcctatatat
     9181 aggaattagg atatatgttt atgttatttt cattcaattt ttaagtcaat aaagttctgt
     9241 gttcttgttt actcttca
//
LOCUS       XM_071829737            2600 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At3g62890-like (LOC139839618), mRNA.
ACCESSION   XM_071829737
VERSION     XM_071829737.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2600
                     /gene="LOC139839618"
                     /note="pentatricopeptide repeat-containing protein
                     At3g62890-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139839618"
     CDS             1..2400
                     /gene="LOC139839618"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At3g62890-like"
                     /protein_id="XP_071685838.1"
                     /db_xref="GeneID:139839618"
                     /translation="MTPAKLIKSTYSSYKYLHKTTTINQSILDSFLFKCQNLKHFNQI
                     LSQMILTGFIKDTYAASRIIKFSTSQSIITNNVDYSRKIFNHIENVNSFTYNTMMRAY
                     LQTNNLKETIFLYELMFKNKDSVNVYPDGYTYPLLVEACIAGCSIFEGKEIHDHVVKM
                     GFDSDIYVRNNLINMYAVCGDLMDARKVFDESPVRDSVSWNSILAGYVQMGNVEEAKL
                     IFDQMPNKNVIASNSMIVLFGQCGRIDEAYQLFADMKDKDIVTWTAMISCYEKIGMYH
                     EALVMFMEMNGLGIKIDDVVVISVLSACARSSAVITGLSIHGLVIKEGTSSYINIQNA
                     LIKLYSDCGDIAGAEKLFNSSSHVDIFSWNSMISGYSKCGTIMKAREVFNSMPEKDVV
                     SWSALISGHKQLGLFDETIALFQEMMLDGRIKPDETILVSVISACTHLSALEQGTWVH
                     AYIKRNGLEFNSILGTTLIDMYMKLGCVESAQEVFYKMENKGVSSWNALIDGFTMNGQ
                     VDKSLQTFSEMKRSGVVPNEITFVAVLGACRHMGLVQEGREYFNSMINVHNIEPNIKH
                     YGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACKKHGANEMGEKVGLKLIE
                     LQPKHDGFHVLLSNIYASKGNWDNVAEIRGTMIQNSVVKTPGCSIIEANGVVHEFLAG
                     DKAHPQIHEIEEMLNTITERVKLIGYFPDTNEVSFDIDDEEKETNLFRHSEKLAIAFG
                     LMAINPPTPIRIMKNLRICNDCHAMAKFVSKAFNREIVVRDRHLFHHFKQGSCSCMEY
                     W"
     misc_feature    247..2385
                     /gene="LOC139839618"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    280..363
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    391..480
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    508..585
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    595..678
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    682..771
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    775..855
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1078..1167
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1171..1254
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1396..1473
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1483..1566
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1582..1674
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1690..1770
                     /gene="LOC139839618"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgacgcctg caaaactgat aaaatcaact tattcaagtt acaaatattt gcataaaaca
       61 acaacaataa atcaatcaat cttagacagc tttttgttta aatgtcaaaa cttgaagcat
      121 ttcaatcaga ttctttctca aatgatactc actggtttca tcaaagacac atatgcagca
      181 agtaggatca tcaagttctc tacttctcaa tcaatcatta ctaataatgt tgattactct
      241 cgtaaaatat tcaatcacat cgaaaacgta aattcgttta cttataacac catgatgcgt
      301 gcttatttgc agacaaataa tctgaaagaa accatttttc tatatgagtt gatgtttaag
      361 aataaggaca gtgttaatgt atatccagat ggttacacgt accctttgtt agttgaagcg
      421 tgtatcgctg ggtgttcgat ttttgagggg aaagagatac atgatcatgt ggtgaaaatg
      481 ggatttgatt cggatattta tgtgcgaaac aatttgatta atatgtatgc ggtttgtggt
      541 gatttaatgg atgcacgcaa ggtgtttgat gaaagtcctg tgagagattc ggtgtcttgg
      601 aattcgattt tggcagggta tgttcagatg ggtaatgttg aagaagcaaa gttgatattt
      661 gatcagatgc ctaacaagaa tgtaattgcc tcgaattcga tgattgtgtt atttggtcag
      721 tgtggccgta tcgatgaagc ttaccagctg tttgctgaca tgaaagataa ggatatcgtt
      781 acgtggactg cgatgattag ttgttatgag aaaatcggca tgtatcatga ggctttggtt
      841 atgtttatgg aaatgaatgg attaggaatc aagattgatg atgttgtagt gattagtgtt
      901 ctttctgcat gtgctcgttc atcggctgtt ataaccggtt tatctattca tgggttagtt
      961 ataaaagaag gaacttcatc ttatatcaac atccaaaatg cattgatcaa actgtattca
     1021 gattgtggag atatagcagg tgcagagaaa ctctttaatt caagctcaca cgttgatatt
     1081 ttttcttgga actctatgat atctggctat tcaaaatgtg gcacaatcat gaaagccaga
     1141 gaagtgttta attcgatgcc tgaaaaggat gttgtatcat ggagtgcact aatatctggc
     1201 cacaagcaac tcggtctatt cgatgaaact atagcgttgt ttcaggagat gatgctcgat
     1261 ggaagaatta agcctgatga gaccatactc gttagtgtga tctcagcgtg cacccattta
     1321 tctgctcttg agcaaggtac atgggttcat gcttacataa aaaggaatgg gttagagttc
     1381 aattctattc ttggtactac ccttatagac atgtacatga agctagggtg cgttgaaagt
     1441 gcacaagagg tcttctataa aatggagaat aaaggagttt cgtcttggaa tgctctgatt
     1501 gacgggttta caatgaatgg acaagtggat aaatcgcttc aaacgttttc ggaaatgaaa
     1561 agatcgggtg tagttcctaa tgaaataacg tttgtggcgg ttcttggtgc ttgtcgccac
     1621 atggggttgg tccaagaggg gcgtgaatac tttaattcta tgatcaatgt acacaacata
     1681 gagcctaata ttaaacatta tggatgcatg gttgatctac ttgggcgtgc agggttgcta
     1741 aaagaagctg aagaactaat tgatagtatg cctatggcac cagatgttgc tacatggggt
     1801 gcgttgctcg gtgcttgtaa gaaacatggt gctaatgaaa tgggagagaa agttgggttg
     1861 aagctcattg agcttcaacc caagcatgat gggtttcatg tattgttatc aaatatatat
     1921 gcttcaaaag gaaattggga taatgtggca gaaataagag gaactatgat acaaaatagt
     1981 gttgtcaaaa cgcctggttg cagcataatt gaagccaacg gtgtagtgca tgaatttcta
     2041 gcaggagata aagcacaccc tcaaattcat gaaattgagg aaatgttgaa tacaataact
     2101 gaaagagtga aattaattgg ctattttcca gacacaaatg aggtttcttt tgacattgat
     2161 gatgaagaga aggaaacaaa cctttttagg catagtgaaa agcttgcaat tgcttttggg
     2221 ttaatggcga ttaatcctcc aactcctatt agaataatga agaatttacg tatatgtaat
     2281 gattgccatg caatggcaaa gtttgtctcc aaagcattta accgtgaaat tgtggtgagg
     2341 gatcgacatc tctttcacca cttcaagcaa ggttcttgtt catgtatgga atattggtag
     2401 tcaatacagg ttatgtgctt ggtaccttgg ttcaaaacat gtctgaaaca agggggctgg
     2461 cttggtttgg aaaatgttgg gttatgaagc attttggtaa ctatcctttc tcagtcataa
     2521 gctttaaata ttatgccact catgaaatta gtcagggcta aagtgaaatt ctgtgtttca
     2581 gtaatatttc tctttaacct
//
LOCUS       XM_071829738            1802 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pentatricopeptide
            repeat-containing protein At1g56570 (LOC139839619), mRNA.
ACCESSION   XM_071829738
VERSION     XM_071829738.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1802
                     /gene="LOC139839619"
                     /note="putative pentatricopeptide repeat-containing
                     protein At1g56570; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139839619"
     CDS             18..1802
                     /gene="LOC139839619"
                     /codon_start=1
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g56570"
                     /protein_id="XP_071685839.1"
                     /db_xref="GeneID:139839619"
                     /translation="MSYKRLPNQIPAVFRNAIDWTQNCKHQSASPQLQPNFAAKTSTN
                     LIKAYFDNGLLNHARQLFDEMPDRDVVAWTAMISGYAAINRHNLAWMTFKDMTRESVD
                     DPNAFTFSSVLKACKGMKSLCCGASCHGLALKHGFVGSSVYVDNALLDMYATCCISME
                     HACSLFGQIQVKNQVSWTTLITGFTHRDNGLAALEVFRQMFKEEAEQSPYTFSIAIRA
                     CAGVGSHCYGSQMHASVFKHGFNLNTPVQNSVLDMYCKCNCFHEAELCFNEMNERDDV
                     TWNTLIAGYEKPDPLKSLHLFLQMELQGCTPNCFTYSSVVAACTNLSVLACGRQIHCG
                     IFKRGLEENVPLANSLIDMYAKSGSIEDSKRMFDIMSSRDLVSWTSMMIGYGSHGRGN
                     EAVELFNEMVSSGVKPDTIVFMAVLTACSHAGLVDQGLSYFKLMTSEYKIIPNQEIYA
                     CVIDMFGRGGRLKEAYDMIQTLPFKPDESVWAAFLGACRAHGQPIMGNMKHILDLRPK
                     KTGIYVLLANMYAAEGKWDDRAKMRKLVNRSGNKKVAGRSWVEIHDQVYSFVAGDGGG
                     SRIEPVFQVLRVLGQHMVDRIHVPQVAS"
     misc_feature    138..221
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    <150..1745
                     /gene="LOC139839619"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    225..314
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    543..626
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    642..731
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    747..836
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    846..926
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1059..1136
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1146..1229
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1245..1337
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1353..1427
                     /gene="LOC139839619"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atataaaaac tacaaccatg agttataaaa gactacccaa tcaaatccct gcagtcttcc
       61 gtaacgctat tgactggacc caaaattgca aacatcaatc agcctcacct cagttacaac
      121 caaattttgc cgccaaaaca tccacaaatc tgatcaaggc ttactttgat aatgggctac
      181 ttaatcatgc tcgccaactg ttcgatgaaa tgcctgaccg agacgttgtt gcatggacgg
      241 ccatgatttc tggttacgca gcaatcaacc gtcacaacct tgcatggatg acgttcaaag
      301 atatgacgag ggaaagcgtg gacgacccga atgccttcac cttttcaagt gttttgaaag
      361 cttgtaaagg catgaagtcg ctttgttgtg gcgcttcatg tcatgggctc gctttgaagc
      421 atggatttgt tggtagtagc gtttatgttg ataatgcact tttggacatg tatgctactt
      481 gttgtatcag tatggagcat gcatgttcct tgtttggaca aattcaagtg aagaatcaag
      541 tgtcttggac tacactcata actggattca ctcatagaga taatgggctt gcagcccttg
      601 aagtatttcg acaaatgttt aaggaggaag ctgaacaaag cccttatact ttctctattg
      661 caatcagggc gtgtgcagga gttggatctc attgttacgg ctcgcaaatg catgcatcag
      721 tgttcaaaca cgggttcaat cttaatactc ccgtacagaa ctctgtgctt gacatgtatt
      781 gcaagtgtaa ttgttttcat gaagcagaac tgtgctttaa cgaaatgaat gaacgagacg
      841 atgtaacatg gaacacgtta atagcaggat acgagaagcc tgatccattg aagtctttgc
      901 acttgttttt gcaaatggaa ttacaagggt gtactccaaa ttgcttcaca tattccagtg
      961 ttgtagcggc ttgtactaat ttatcagttt tggcatgcgg tcgacagatt cattgtggga
     1021 tcttcaagag aggtcttgaa gaaaacgtgc cattagcaaa ttctttaatc gacatgtatg
     1081 cgaagtctgg aagcattgaa gattctaaaa ggatgtttga tattatgtct tctcgggatc
     1141 tggtttcatg gacttcaatg atgattggat acgggagcca tggacgtggt aacgaggctg
     1201 ttgagttatt caacgagatg gtgagttcag gtgtaaaacc agatacaatc gtgttcatgg
     1261 cagtacttac ggcttgcagt catgctgggc ttgttgacca ggggttaagt tactttaagt
     1321 tgatgactag tgaatataaa attatcccga atcaagaaat ttatgcgtgt gttattgata
     1381 tgtttgggcg tggtggaagg ttgaaggaag catatgatat gatacagact ttgcctttta
     1441 aaccggatga atctgtttgg gcagcgtttc ttggagcatg cagagcacac gggcagccca
     1501 ttatggggaa tatgaaacat atattagatt taaggcctaa aaagacagga atttatgtgt
     1561 tgttggcaaa tatgtatgct gctgaaggta aatgggatga tcgagccaaa atgaggaaat
     1621 tggtaaatag atcggggaat aagaaagttg ctggtaggag ttgggtagaa atacatgacc
     1681 aggtctatag ttttgttgct ggagatggtg gtggttctcg aattgagccg gtattccaag
     1741 ttcttagagt gttgggtcag cacatggttg accgaatcca tgtccctcag gttgcatctt
     1801 ag
//
LOCUS       XM_071829739            2989 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839620), transcript variant X1, mRNA.
ACCESSION   XM_071829739
VERSION     XM_071829739.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2989
                     /gene="LOC139839620"
                     /note="uncharacterized LOC139839620; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839620"
     CDS             1231..2808
                     /gene="LOC139839620"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071685840.1"
                     /db_xref="GeneID:139839620"
                     /translation="MCLTVCTLSNYIFPWSLVLNLSLSHSDMSADCISPDQDIEESWG
                     NKRRARAFVWEYFEKIIGEDGLPKTKCTKCNTVYNLAPTSGTSTLRRHLRKCCRQPIS
                     QATPLQVIPGTKTPSSSDKLSDEARSAKKLKCKSRDEVSDEASANKLKSAMVDNLHGK
                     TDRELVEFIWKYKRNVGLLEQKLPHKAMAIKEAIKCYEDEIARRAKPHRPKENGPDLV
                     SSAAPVKIEWDDQIVDRSEKVGEDVAENGSAVANETPDTHADANQDQMPPPCENGEVV
                     IKVEVDDQSAAGNENFEDQIQKPTQQTEISILPEDICSELKEVSSVLSVLTSPNSFYT
                     PQGNPLDQEAENAKQNLTKLLKKDFETIIGSPDEQNVKSCISILIKNLHKLPRFQGKV
                     IETLNTEFESACKNWTTWHKIVETNIVLEAQQENNLEVLQVWQEKDVEFESKIAKVDA
                     DILELKAQLREKELIREGLIKQKCDLFDQSKISIDEAKKLLHEMVTVKLQSDVATDNM
                     KELSSKWERIRENFKFE"
     misc_feature    1384..1527
                     /gene="LOC139839620"
                     /note="BED zinc finger; Region: ZnF_BED; smart00614"
                     /db_xref="CDD:214746"
ORIGIN      
        1 gcatccatta aatcaccaca aaccgcatac atattaatca aattgtttcg cacataaata
       61 tccgaatcaa atcccatttt caccacatga tcatgtatct ctttcccctc aaaaatcgaa
      121 cacccagcga tacacgcttc aactaacaaa gggtacgtgt aaccatctgg atatacatta
      181 acactgtcct tattcttaaa catcaactca tatagaaaaa tggtttcttt cagattattt
      241 gtctgcaaat aagcacgcat catggtgtta taagtaaacg aatttacgtt ttcgatgtga
      301 ttgaatattt tacgagagta atcaacatta ttagtaatga ttgattgaga agtagagaac
      361 ttgatgatcc tacttgctgc atatgtgtct ttgatgaaac cagtgagtat catttgagaa
      421 agaatctgat tgaaatgctt caagttttga catttaaaca aaaagctgtc taagattgat
      481 tgatttattg ttgttgtttt atgcaaatat ttgtaacttg aataagttga ttttatcagt
      541 tttgcaggcg tcatattagg aaaaaaaaaa aaaaaaaaaa ctgattttta agtacagcag
      601 caaaagagca aataaagacc ttgaaaaaaa aagtgaggcc ctaataagaa cgttacacgc
      661 gcgttgacgc gctacctttt ttccaaattt caccgtttaa ctatttttat tcctaaagac
      721 ggcaaaccac gttattgttg ggtcgttctt cttcgcatga cgacggaaga ctgactgatt
      781 acttacgact tccgattacc gtcaccggta aatttcttca attttaccac tgatcgattc
      841 aggaattgag gtaaaaaaat ttattataat cctcgatttt gtgttttggt aatctctact
      901 gcctgcaata atttgtgtca attttgacgt gtaaaatgtg aggatttatt atttgaattt
      961 gacgtagcta tttttagatt ttgtttctaa cgattttaat tataatcaag tgaagtccac
     1021 aagctcaaat cagtatgata tgaccaattg tagtaaggaa atggttctat gaatttcaga
     1081 ttaggtgtaa tttgaggtta accctagctc ttctcgtgct atagaaatag aaatgctaat
     1141 tatatgatta attagtgagt ttgaaggatg tttagtgata cattttggtt tgccctgatc
     1201 actacaatct acaagtgttc tacaatatga atgtgcttaa cagtatgtac tttgtcaaac
     1261 tatatattcc cctggtcact ggtgctaaat ttgtctttat ctcattcaga tatgtcagct
     1321 gattgtatta gtcctgacca agatattgaa gaatcttggg gtaataagag acgcgcacga
     1381 gcttttgtgt gggagtattt tgagaagatt attggggaag atggtctacc aaaaacaaag
     1441 tgcaccaagt gtaacacagt ttacaatttg gcaccaactt caggtacatc aacattgaga
     1501 aggcacttac gtaagtgttg tcgacaaccg atatctcaag caaccccact ccaggtcatc
     1561 ccggggacaa aaactcctag ctccagtgac aagctgtcag atgaggctag gtcagccaaa
     1621 aagttgaagt gcaagtctcg tgatgaggta tctgatgagg cttcagcgaa taaattgaag
     1681 tctgctatgg tggataacct ccatggcaag acagataggg aattggttga gtttatttgg
     1741 aagtataagc gaaatgttgg acttcttgag cagaagttgc cgcataaggc catggctatt
     1801 aaggaagcta tcaagtgtta tgaagatgaa attgctcgca gggcaaagcc tcatcgtcct
     1861 aaggagaacg gtccagatct agtgtctagc gcagcgccag ttaaaatcga atgggatgat
     1921 caaattgttg atcgttctga gaaggttggt gaggatgtgg ctgagaatgg gagtgctgta
     1981 gcaaatgaga ctccagatac acatgctgat gcgaatcagg atcaaatgcc cccaccatgt
     2041 gaaaatggag aagtggttat taaagttgag gttgatgatc aatctgctgc tggaaatgag
     2101 aattttgaag atcagatcca gaaacctacc caacaaactg aaatttcgat tcttcctgaa
     2161 gacatatgtt cagaattgaa ggaagtttca tctgtacttt cggtgctaac ttcaccgaac
     2221 agtttctaca ctcctcaagg caatcctctt gatcaagaag ccgaaaacgc aaaacaaaac
     2281 cttaccaaac ttttgaaaaa agacttcgaa actattatag gatcaccaga tgaacaaaat
     2341 gtcaaatctt gtatcagtat tttgatcaaa aacctccaca agcttccaag gttccaaggc
     2401 aaagttattg aaaccctcaa tactgaattc gaatcggcct gcaaaaactg gacaacttgg
     2461 cataaaattg ttgagaccaa tattgtgttg gaagcgcagc aagaaaacaa tcttgaggtg
     2521 ttgcaggtat ggcaggagaa agacgtggaa tttgagtcta aaatagctaa agtggatgca
     2581 gatatacttg agttaaaagc tcaattacgt gaaaaagaat tgatccgaga aggtttgatt
     2641 aaacagaagt gtgatttgtt tgaccagagc aagatctcga ttgatgaagc aaagaagctt
     2701 cttcatgaga tggtaactgt caagttgcag agtgatgttg ctactgataa catgaaagaa
     2761 ctttcttcca aatgggaaag aattagggaa aatttcaagt tcgagtaagt atgagatgcc
     2821 ttttcctttt cttagtacat aattaaaaga aaaaaaaaaa aaaaaagtca aaagcttaag
     2881 tagaatttga ttttgtgttg catggaacaa cagtaggatt agtagcaaac ttcgttttgg
     2941 tttctgtaat gacatgttaa ttataatcta ttggtttaat tatgtggtg
//
LOCUS       XM_071829740            1881 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839620), transcript variant X2, mRNA.
ACCESSION   XM_071829740
VERSION     XM_071829740.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1881
                     /gene="LOC139839620"
                     /note="uncharacterized LOC139839620; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839620"
     CDS             129..1700
                     /gene="LOC139839620"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685841.1"
                     /db_xref="GeneID:139839620"
                     /translation="MIVSHRAFSLIVLGLSIDLLKAHTDMSADCISPDQDIEESWGNK
                     RRARAFVWEYFEKIIGEDGLPKTKCTKCNTVYNLAPTSGTSTLRRHLRKCCRQPISQA
                     TPLQVIPGTKTPSSSDKLSDEARSAKKLKCKSRDEVSDEASANKLKSAMVDNLHGKTD
                     RELVEFIWKYKRNVGLLEQKLPHKAMAIKEAIKCYEDEIARRAKPHRPKENGPDLVSS
                     AAPVKIEWDDQIVDRSEKVGEDVAENGSAVANETPDTHADANQDQMPPPCENGEVVIK
                     VEVDDQSAAGNENFEDQIQKPTQQTEISILPEDICSELKEVSSVLSVLTSPNSFYTPQ
                     GNPLDQEAENAKQNLTKLLKKDFETIIGSPDEQNVKSCISILIKNLHKLPRFQGKVIE
                     TLNTEFESACKNWTTWHKIVETNIVLEAQQENNLEVLQVWQEKDVEFESKIAKVDADI
                     LELKAQLREKELIREGLIKQKCDLFDQSKISIDEAKKLLHEMVTVKLQSDVATDNMKE
                     LSSKWERIRENFKFE"
     misc_feature    276..419
                     /gene="LOC139839620"
                     /note="BED zinc finger; Region: ZnF_BED; smart00614"
                     /db_xref="CDD:214746"
ORIGIN      
        1 attgagccgg tattccaagt tcttagagtg ttgggtcagc acatggttga ccgaatccat
       61 gtccctcagg ttgcatctta gggagcatta gaatttagaa gtcacatatt atacggatta
      121 cattataaat gattgttagt cacagagcct ttagcctaat tgtattggga ttatccattg
      181 atcttttaaa agcacacact gatatgtcag ctgattgtat tagtcctgac caagatattg
      241 aagaatcttg gggtaataag agacgcgcac gagcttttgt gtgggagtat tttgagaaga
      301 ttattgggga agatggtcta ccaaaaacaa agtgcaccaa gtgtaacaca gtttacaatt
      361 tggcaccaac ttcaggtaca tcaacattga gaaggcactt acgtaagtgt tgtcgacaac
      421 cgatatctca agcaacccca ctccaggtca tcccggggac aaaaactcct agctccagtg
      481 acaagctgtc agatgaggct aggtcagcca aaaagttgaa gtgcaagtct cgtgatgagg
      541 tatctgatga ggcttcagcg aataaattga agtctgctat ggtggataac ctccatggca
      601 agacagatag ggaattggtt gagtttattt ggaagtataa gcgaaatgtt ggacttcttg
      661 agcagaagtt gccgcataag gccatggcta ttaaggaagc tatcaagtgt tatgaagatg
      721 aaattgctcg cagggcaaag cctcatcgtc ctaaggagaa cggtccagat ctagtgtcta
      781 gcgcagcgcc agttaaaatc gaatgggatg atcaaattgt tgatcgttct gagaaggttg
      841 gtgaggatgt ggctgagaat gggagtgctg tagcaaatga gactccagat acacatgctg
      901 atgcgaatca ggatcaaatg cccccaccat gtgaaaatgg agaagtggtt attaaagttg
      961 aggttgatga tcaatctgct gctggaaatg agaattttga agatcagatc cagaaaccta
     1021 cccaacaaac tgaaatttcg attcttcctg aagacatatg ttcagaattg aaggaagttt
     1081 catctgtact ttcggtgcta acttcaccga acagtttcta cactcctcaa ggcaatcctc
     1141 ttgatcaaga agccgaaaac gcaaaacaaa accttaccaa acttttgaaa aaagacttcg
     1201 aaactattat aggatcacca gatgaacaaa atgtcaaatc ttgtatcagt attttgatca
     1261 aaaacctcca caagcttcca aggttccaag gcaaagttat tgaaaccctc aatactgaat
     1321 tcgaatcggc ctgcaaaaac tggacaactt ggcataaaat tgttgagacc aatattgtgt
     1381 tggaagcgca gcaagaaaac aatcttgagg tgttgcaggt atggcaggag aaagacgtgg
     1441 aatttgagtc taaaatagct aaagtggatg cagatatact tgagttaaaa gctcaattac
     1501 gtgaaaaaga attgatccga gaaggtttga ttaaacagaa gtgtgatttg tttgaccaga
     1561 gcaagatctc gattgatgaa gcaaagaagc ttcttcatga gatggtaact gtcaagttgc
     1621 agagtgatgt tgctactgat aacatgaaag aactttcttc caaatgggaa agaattaggg
     1681 aaaatttcaa gttcgagtaa gtatgagatg ccttttcctt ttcttagtac ataattaaaa
     1741 gaaaaaaaaa aaaaaaaagt caaaagctta agtagaattt gattttgtgt tgcatggaac
     1801 aacagtagga ttagtagcaa acttcgtttt ggtttctgta atgacatgtt aattataatc
     1861 tattggttta attatgtggt g
//
LOCUS       XM_071829741            2530 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839620), transcript variant X3, mRNA.
ACCESSION   XM_071829741
VERSION     XM_071829741.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2530
                     /gene="LOC139839620"
                     /note="uncharacterized LOC139839620; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839620"
     CDS             853..2349
                     /gene="LOC139839620"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071685842.1"
                     /db_xref="GeneID:139839620"
                     /translation="MSADCISPDQDIEESWGNKRRARAFVWEYFEKIIGEDGLPKTKC
                     TKCNTVYNLAPTSGTSTLRRHLRKCCRQPISQATPLQVIPGTKTPSSSDKLSDEARSA
                     KKLKCKSRDEVSDEASANKLKSAMVDNLHGKTDRELVEFIWKYKRNVGLLEQKLPHKA
                     MAIKEAIKCYEDEIARRAKPHRPKENGPDLVSSAAPVKIEWDDQIVDRSEKVGEDVAE
                     NGSAVANETPDTHADANQDQMPPPCENGEVVIKVEVDDQSAAGNENFEDQIQKPTQQT
                     EISILPEDICSELKEVSSVLSVLTSPNSFYTPQGNPLDQEAENAKQNLTKLLKKDFET
                     IIGSPDEQNVKSCISILIKNLHKLPRFQGKVIETLNTEFESACKNWTTWHKIVETNIV
                     LEAQQENNLEVLQVWQEKDVEFESKIAKVDADILELKAQLREKELIREGLIKQKCDLF
                     DQSKISIDEAKKLLHEMVTVKLQSDVATDNMKELSSKWERIRENFKFE"
     misc_feature    925..1068
                     /gene="LOC139839620"
                     /note="BED zinc finger; Region: ZnF_BED; smart00614"
                     /db_xref="CDD:214746"
ORIGIN      
        1 gcatccatta aatcaccaca aaccgcatac atattaatca aattgtttcg cacataaata
       61 tccgaatcaa atcccatttt caccacatga tcatgtatct ctttcccctc aaaaatcgaa
      121 cacccagcga tacacgcttc aactaacaaa gggtacgtgt aaccatctgg atatacatta
      181 acactgtcct tattcttaaa catcaactca tatagaaaaa tggtttcttt cagattattt
      241 gtctgcaaat aagcacgcat catggtgtta taagtaaacg aatttacgtt ttcgatgtga
      301 ttgaatattt tacgagagta atcaacatta ttagtaatga ttgattgaga agtagagaac
      361 ttgatgatcc tacttgctgc atatgtgtct ttgatgaaac cagtgagtat catttgagaa
      421 agaatctgat tgaaatgctt caagttttga catttaaaca aaaagctgtc taagattgat
      481 tgatttattg ttgttgtttt atgcaaatat ttgtaacttg aataagttga ttttatcagt
      541 tttgcaggcg tcatattagg aaaaaaaaaa aaaaaaaaaa ctgattttta agtacagcag
      601 caaaagagca aataaagacc ttgaaaaaaa aagtgaggcc ctaataagaa cgttacacgc
      661 gcgttgacgc gctacctttt ttccaaattt caccgtttaa ctatttttat tcctaaagac
      721 ggcaaaccac gttattgttg ggtcgttctt cttcgcatga cgacggaaga ctgactgatt
      781 acttacgact tccgattacc gtcaccggta aatttcttca attttaccac tgatcgattc
      841 aggaattgag atatgtcagc tgattgtatt agtcctgacc aagatattga agaatcttgg
      901 ggtaataaga gacgcgcacg agcttttgtg tgggagtatt ttgagaagat tattggggaa
      961 gatggtctac caaaaacaaa gtgcaccaag tgtaacacag tttacaattt ggcaccaact
     1021 tcaggtacat caacattgag aaggcactta cgtaagtgtt gtcgacaacc gatatctcaa
     1081 gcaaccccac tccaggtcat cccggggaca aaaactccta gctccagtga caagctgtca
     1141 gatgaggcta ggtcagccaa aaagttgaag tgcaagtctc gtgatgaggt atctgatgag
     1201 gcttcagcga ataaattgaa gtctgctatg gtggataacc tccatggcaa gacagatagg
     1261 gaattggttg agtttatttg gaagtataag cgaaatgttg gacttcttga gcagaagttg
     1321 ccgcataagg ccatggctat taaggaagct atcaagtgtt atgaagatga aattgctcgc
     1381 agggcaaagc ctcatcgtcc taaggagaac ggtccagatc tagtgtctag cgcagcgcca
     1441 gttaaaatcg aatgggatga tcaaattgtt gatcgttctg agaaggttgg tgaggatgtg
     1501 gctgagaatg ggagtgctgt agcaaatgag actccagata cacatgctga tgcgaatcag
     1561 gatcaaatgc ccccaccatg tgaaaatgga gaagtggtta ttaaagttga ggttgatgat
     1621 caatctgctg ctggaaatga gaattttgaa gatcagatcc agaaacctac ccaacaaact
     1681 gaaatttcga ttcttcctga agacatatgt tcagaattga aggaagtttc atctgtactt
     1741 tcggtgctaa cttcaccgaa cagtttctac actcctcaag gcaatcctct tgatcaagaa
     1801 gccgaaaacg caaaacaaaa ccttaccaaa cttttgaaaa aagacttcga aactattata
     1861 ggatcaccag atgaacaaaa tgtcaaatct tgtatcagta ttttgatcaa aaacctccac
     1921 aagcttccaa ggttccaagg caaagttatt gaaaccctca atactgaatt cgaatcggcc
     1981 tgcaaaaact ggacaacttg gcataaaatt gttgagacca atattgtgtt ggaagcgcag
     2041 caagaaaaca atcttgaggt gttgcaggta tggcaggaga aagacgtgga atttgagtct
     2101 aaaatagcta aagtggatgc agatatactt gagttaaaag ctcaattacg tgaaaaagaa
     2161 ttgatccgag aaggtttgat taaacagaag tgtgatttgt ttgaccagag caagatctcg
     2221 attgatgaag caaagaagct tcttcatgag atggtaactg tcaagttgca gagtgatgtt
     2281 gctactgata acatgaaaga actttcttcc aaatgggaaa gaattaggga aaatttcaag
     2341 ttcgagtaag tatgagatgc cttttccttt tcttagtaca taattaaaag aaaaaaaaaa
     2401 aaaaaaagtc aaaagcttaa gtagaatttg attttgtgtt gcatggaaca acagtaggat
     2461 tagtagcaaa cttcgttttg gtttctgtaa tgacatgtta attataatct attggtttaa
     2521 ttatgtggtg
//
LOCUS       XM_071829742            2487 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839620), transcript variant X4, mRNA.
ACCESSION   XM_071829742
VERSION     XM_071829742.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2487
                     /gene="LOC139839620"
                     /note="uncharacterized LOC139839620; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839620"
     CDS             810..2306
                     /gene="LOC139839620"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071685843.1"
                     /db_xref="GeneID:139839620"
                     /translation="MSADCISPDQDIEESWGNKRRARAFVWEYFEKIIGEDGLPKTKC
                     TKCNTVYNLAPTSGTSTLRRHLRKCCRQPISQATPLQVIPGTKTPSSSDKLSDEARSA
                     KKLKCKSRDEVSDEASANKLKSAMVDNLHGKTDRELVEFIWKYKRNVGLLEQKLPHKA
                     MAIKEAIKCYEDEIARRAKPHRPKENGPDLVSSAAPVKIEWDDQIVDRSEKVGEDVAE
                     NGSAVANETPDTHADANQDQMPPPCENGEVVIKVEVDDQSAAGNENFEDQIQKPTQQT
                     EISILPEDICSELKEVSSVLSVLTSPNSFYTPQGNPLDQEAENAKQNLTKLLKKDFET
                     IIGSPDEQNVKSCISILIKNLHKLPRFQGKVIETLNTEFESACKNWTTWHKIVETNIV
                     LEAQQENNLEVLQVWQEKDVEFESKIAKVDADILELKAQLREKELIREGLIKQKCDLF
                     DQSKISIDEAKKLLHEMVTVKLQSDVATDNMKELSSKWERIRENFKFE"
     misc_feature    882..1025
                     /gene="LOC139839620"
                     /note="BED zinc finger; Region: ZnF_BED; smart00614"
                     /db_xref="CDD:214746"
ORIGIN      
        1 gcatccatta aatcaccaca aaccgcatac atattaatca aattgtttcg cacataaata
       61 tccgaatcaa atcccatttt caccacatga tcatgtatct ctttcccctc aaaaatcgaa
      121 cacccagcga tacacgcttc aactaacaaa gggtacgtgt aaccatctgg atatacatta
      181 acactgtcct tattcttaaa catcaactca tatagaaaaa tggtttcttt cagattattt
      241 gtctgcaaat aagcacgcat catggtgtta taagtaaacg aatttacgtt ttcgatgtga
      301 ttgaatattt tacgagagta atcaacatta ttagtaatga ttgattgaga agtagagaac
      361 ttgatgatcc tacttgctgc atatgtgtct ttgatgaaac cagtgagtat catttgagaa
      421 agaatctgat tgaaatgctt caagttttga catttaaaca aaaagctgtc taagattgat
      481 tgatttattg ttgttgtttt atgcaaatat ttgtaacttg aataagttga ttttatcagt
      541 tttgcaggcg tcatattagg aaaaaaaaaa aaaaaaaaaa ctgattttta agtacagcag
      601 caaaagagca aataaagacc ttgaaaaaaa aagtgaggcc ctaataagaa cgttacacgc
      661 gcgttgacgc gctacctttt ttccaaattt caccgtttaa ctatttttat tcctaaagac
      721 ggcaaaccac gttattgttg ggtcgttctt cttcgcatga cgacggaaga ctgactgatt
      781 acttacgact tccgattacc gtcaccgata tgtcagctga ttgtattagt cctgaccaag
      841 atattgaaga atcttggggt aataagagac gcgcacgagc ttttgtgtgg gagtattttg
      901 agaagattat tggggaagat ggtctaccaa aaacaaagtg caccaagtgt aacacagttt
      961 acaatttggc accaacttca ggtacatcaa cattgagaag gcacttacgt aagtgttgtc
     1021 gacaaccgat atctcaagca accccactcc aggtcatccc ggggacaaaa actcctagct
     1081 ccagtgacaa gctgtcagat gaggctaggt cagccaaaaa gttgaagtgc aagtctcgtg
     1141 atgaggtatc tgatgaggct tcagcgaata aattgaagtc tgctatggtg gataacctcc
     1201 atggcaagac agatagggaa ttggttgagt ttatttggaa gtataagcga aatgttggac
     1261 ttcttgagca gaagttgccg cataaggcca tggctattaa ggaagctatc aagtgttatg
     1321 aagatgaaat tgctcgcagg gcaaagcctc atcgtcctaa ggagaacggt ccagatctag
     1381 tgtctagcgc agcgccagtt aaaatcgaat gggatgatca aattgttgat cgttctgaga
     1441 aggttggtga ggatgtggct gagaatggga gtgctgtagc aaatgagact ccagatacac
     1501 atgctgatgc gaatcaggat caaatgcccc caccatgtga aaatggagaa gtggttatta
     1561 aagttgaggt tgatgatcaa tctgctgctg gaaatgagaa ttttgaagat cagatccaga
     1621 aacctaccca acaaactgaa atttcgattc ttcctgaaga catatgttca gaattgaagg
     1681 aagtttcatc tgtactttcg gtgctaactt caccgaacag tttctacact cctcaaggca
     1741 atcctcttga tcaagaagcc gaaaacgcaa aacaaaacct taccaaactt ttgaaaaaag
     1801 acttcgaaac tattatagga tcaccagatg aacaaaatgt caaatcttgt atcagtattt
     1861 tgatcaaaaa cctccacaag cttccaaggt tccaaggcaa agttattgaa accctcaata
     1921 ctgaattcga atcggcctgc aaaaactgga caacttggca taaaattgtt gagaccaata
     1981 ttgtgttgga agcgcagcaa gaaaacaatc ttgaggtgtt gcaggtatgg caggagaaag
     2041 acgtggaatt tgagtctaaa atagctaaag tggatgcaga tatacttgag ttaaaagctc
     2101 aattacgtga aaaagaattg atccgagaag gtttgattaa acagaagtgt gatttgtttg
     2161 accagagcaa gatctcgatt gatgaagcaa agaagcttct tcatgagatg gtaactgtca
     2221 agttgcagag tgatgttgct actgataaca tgaaagaact ttcttccaaa tgggaaagaa
     2281 ttagggaaaa tttcaagttc gagtaagtat gagatgcctt ttccttttct tagtacataa
     2341 ttaaaagaaa aaaaaaaaaa aaaagtcaaa agcttaagta gaatttgatt ttgtgttgca
     2401 tggaacaaca gtaggattag tagcaaactt cgttttggtt tctgtaatga catgttaatt
     2461 ataatctatt ggtttaatta tgtggtg
//
LOCUS       XM_071829743            5360 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides homeobox-DDT domain protein
            RLT2-like (LOC139839621), mRNA.
ACCESSION   XM_071829743
VERSION     XM_071829743.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5360
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5360
                     /gene="LOC139839621"
                     /note="homeobox-DDT domain protein RLT2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139839621"
     CDS             205..5151
                     /gene="LOC139839621"
                     /codon_start=1
                     /product="homeobox-DDT domain protein RLT2-like"
                     /protein_id="XP_071685844.1"
                     /db_xref="GeneID:139839621"
                     /translation="MDDDGVGGSTGGVSGGEGGAEPKVKRKMKSAFQLETLENTYAVE
                     QYPSEALRADLSVKLGLTDRQLQMWFCHRRLKDRKPPPVKKSKKEMSSGVVRVDMGGS
                     GEGLGGNEYGGSGSGSSLFGHGDRAVSRGGPVVSGRVATSSEMPSIKRYYESPQAVNE
                     ARAVAFVEAQLGERLHEDGPILGMEFDPLPPGAFGAPIVQQHSAVRTYDAKLYERPDS
                     KPAKGVAKAPREYQFLPEQQSVRSDSHDRAMPSQYYGSPSNAASSRTPGRSVTHASDQ
                     KPSAYDFQGPVSLLPPQQAKQGSYGESDVVARKTSTAVSLGSETLGPHPITGIENPFA
                     TPSVTHEDRMAQIERKRKSEEARIAKEVEANERRIRKELEKQDMMRRKREEQMRKEME
                     RQDRERRKEEERLLREKQREEERYQREQRREMERRVKFLQKESMRAEKLRLKEDMRRE
                     KEAARLKAANDRAAARRIAKESLELIDDERLELMEIAASVKGLTSMMSLDSETLDNLE
                     SFRDKLPEFPPKSVHLKRPFKTQPWTDSDENISNLLMIWKFLITFADVLGLWPFTLDE
                     FVQALHDHDPRLLGEINVALLKLIVKDIEDVARAPSSSLAANQIGVPNPGGGHPQIVQ
                     GAFGWGFDICSWQRHLNPLTWPEILRQFALAAGYGPKLKGRNIDLGHPHEENEGVDDG
                     DIVSNLRSGAAAESALAIMRERGFSNRRSRHRLTPGTVKYAAFHVLSLEGSRGLSILD
                     VADKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCLKTPYRKDPADGEAL
                     ITAAREKIQKFKNGFFDGEEVFDAEKDDAEKDDDSESDAPEDPEVDDIGIDSISGVKA
                     EVAGGEDIKVESSVEKLNVVDGTHKGVTGPDEDSVVDESISGEPWVQGLMESEYSDLS
                     VEERLNALVAVIAFANEGNSIRVVLEERLEAAMSLKKQMWAEAQIDRRRMREDFMVKI
                     PYPYGDDVASNHQENLGDPQVDLGNNLSERLLEPAYAAEKWRSQLKSFIGHKAEEMYV
                     YRSLPLGQDRRRNRYWQFVTCASQNDPGSSRIFVELRDGRWRLIDNEEGFNGLLASLD
                     VRGNREAHLHSMLQRIESRFKEAINRIQVNVSGIGSTTSGSSSPSSTISIPNTNVTEF
                     SSSFAIELGLNENEVNNALKRYEDFEKWMWGECLILRASKFENTRCENLVGICDNCRD
                     LLYFEDDRCSSCQKLRETILDSNLTFAKHIARFKEKLKRESVLYYRNQKSVGSVRFRL
                     IKSQLALIEASLPMEALQPSWTGDCRKSWCAKLVNAVTTETLLEVLTLLESAIKREFL
                     SLDFETTDELLGSNNTAALCATGDCYTVTVLPWLPETTSCVALRLMELDTSIHYSLSQ
                     KEDAEKDKGATSNLILHPKYAAVMNSEEGDYGDSLFGSGSLQDPWIDPGTSGRGRGRG
                     RGRGRGRGGRPQKSVGAIGSRSRNKTVESSGSGVQLVGWKGRARGGRGGRKRGRGGVQ
                     FTQEKMVNDVEPNNSQEFLYEESPVVGFQEWDAEENRDVRVAENGSSSEYEIEEENNG
                     VDEYSDMLVDDGYQNVYDHRVAPREYIRDDHLEGEEDDDVGVEMDEDDDDEQEGVDVD
                     GFFNDDSDENRDVDDGRQIRNNNNTGDETELSSSGYSD"
     misc_feature    277..438
                     /gene="LOC139839621"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     misc_feature    <1228..>1659
                     /gene="LOC139839621"
                     /note="Family of unknown function (DUF5401); Region:
                     DUF5401; pfam17380"
                     /db_xref="CDD:375164"
     misc_feature    1816..1983
                     /gene="LOC139839621"
                     /note="DDT domain; Region: DDT; pfam02791"
                     /db_xref="CDD:460696"
     misc_feature    2356..2556
                     /gene="LOC139839621"
                     /note="HB1, ASXL, restriction endonuclease HTH domain;
                     Region: HARE-HTH; pfam05066"
                     /db_xref="CDD:461541"
     misc_feature    2887..3024
                     /gene="LOC139839621"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; Region: WHIM1;
                     pfam15612"
                     /db_xref="CDD:464774"
     misc_feature    3295..3519
                     /gene="LOC139839621"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     Region: WSD; pfam15613"
                     /db_xref="CDD:464775"
     polyA_site      5360
                     /gene="LOC139839621"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttattatttt ttgtttaatg taatttcatc tacctttact ttttcttcaa acaataacta
       61 accctagttt ctagatatgt gtatatttat gccgttttct cgctctgcaa gtcttagttt
      121 ttgtcaagta atcatttttt gatttgggtt tgatctcaat tgcaaaaccc agttcacaga
      181 tctcaatctt tttcacttaa aaaaatggat gatgatggtg ttggtggtag tactggtggt
      241 gttagcggcg gcgaaggcgg tgctgaacca aaggtgaaga ggaagatgaa gtctgctttt
      301 cagttggaga cacttgagaa tacttatgct gtggaacaat acccatctga agcacttcga
      361 gccgatttat cggtgaagtt ggggttaaca gatcggcaat tgcagatgtg gttttgtcat
      421 aggaggttaa aagaccgaaa accaccacca gtgaaaaagt caaaaaagga aatgtctagt
      481 ggtgttgtta gggttgatat gggtgggtct ggggaggggt taggtggaaa tgagtatggt
      541 ggatcgggtt ctgggtcgag tttgtttggt catggggatc gagccgtgtc tagaggtggt
      601 ccagttgtta gtgggagggt tgcaacaagt agtgagatgc catctataaa aaggtattac
      661 gagtctccac aagcggttaa tgaggctcga gccgttgctt ttgttgaggc gcagttgggt
      721 gagcggttac atgaagatgg tcctattctt ggaatggagt ttgacccctt gccacctggt
      781 gcatttggtg caccgatagt tcaacagcat tcagcggttc gaacatatga tgctaaactc
      841 tacgagcgtc ctgattcaaa acctgcgaag ggtgttgcaa aggctccacg tgaatatcaa
      901 tttcttccag aacaacaatc ggttagaagt gattctcatg atagagcgat gccatctcag
      961 tattatggtt caccatctaa tgctgcaagc agtcggacac ctggacgttc tgttactcac
     1021 gcgagtgatc aaaaaccatc tgcgtacgat tttcaaggac ctgtaagtct tttgccacct
     1081 cagcaagcaa agcaaggctc gtatggagaa tctgatgttg ttgctcgtaa aacctctact
     1141 gccgtgagcc ttggatcgga aactcttggt cctcacccga taaccggaat agagaatccg
     1201 tttgctacac catctgttac ccatgaggat cgtatggcac aaatcgaaag aaaacgcaag
     1261 agtgaagaag cgagaatagc gaaggaggtt gaagccaatg aaagaagaat cagaaaagag
     1321 cttgaaaagc aagatatgat gaggcgaaag agagaggaac aaatgaggaa agaaatggag
     1381 aggcaagatc gtgagcgtag gaaagaagaa gaacgattgt tgcgtgagaa acaacgtgag
     1441 gaagaacgat atcaaagaga acaaagacgt gaaatggagc ggagggtaaa gtttttacag
     1501 aaggaatcta tgagagctga aaaattacga cttaaggaag atatgcggag ggagaaggag
     1561 gctgcaaggc ttaaagccgc taacgataga gcggctgctc gaagaattgc aaaagagtcg
     1621 ttggagttaa ttgatgacga gcgtttggaa ttgatggaga tagcggcttc agttaaagga
     1681 ttgacctcaa tgatgtctct tgatagcgag actcttgata atctcgaatc attcagagat
     1741 aagcttcctg aatttccgcc caaatccgtg cacttgaaaa ggccatttaa aactcaacca
     1801 tggactgatt ctgacgagaa catcagcaat cttcttatga tttggaagtt tttgatcacc
     1861 tttgccgatg ttcttggact atggcctttt acccttgatg agttcgttca agctcttcat
     1921 gatcatgatc ctcgactgct gggagaaata aatgtagcac ttttgaaatt gatagttaaa
     1981 gacatcgaag atgtagcaag ggcaccctca tcctctttag cagcaaatca aattggtgtt
     2041 cctaatcctg gaggtggtca tccgcaaatc gtccaagggg catttggttg ggggtttgac
     2101 atatgtagct ggcagcgaca cttaaatccg ttgacttggc cggagatatt acgtcaattc
     2161 gctcttgctg caggatatgg accaaagttg aaaggaagaa atatcgatct agggcaccct
     2221 catgaagaaa atgagggtgt tgatgatgga gatatcgttt ctaatttacg aagtggagcg
     2281 gcagccgaaa gtgcattggc catcatgcga gaaaggggtt tctccaatag acgatccaga
     2341 catcgtttga cacctggaac agttaaatat gcagcatttc atgtgctttc actcgaagga
     2401 agccgcggtc tttcgatatt ggatgttgcc gacaagattc agaaatctgg tcttcgggat
     2461 ctcacaacta gcaaaacacc agaggcgtcg attgctgccg cgttatctag agatacaaag
     2521 ctttttgaaa gaaccgcccc gtcaacatat tgcctaaaaa ctccttaccg aaaggatcct
     2581 gccgacgggg aggcgcttat tactgccgcc agagaaaaaa ttcagaaatt taaaaacggg
     2641 ttttttgatg gtgaagaggt gtttgatgcc gaaaaggatg atgctgaaaa agacgacgat
     2701 tctgaaagtg atgctcccga agatcccgaa gttgatgata ttggcatcga ttctatttct
     2761 ggtgtaaaag ctgaagtggc aggaggagaa gacataaagg ttgagtcttc tgttgagaaa
     2821 ttgaacgttg ttgatgggac ccacaaggga gtgaccggtc cagatgaaga tagtgtagtt
     2881 gatgaaagta tttcgggtga gccatgggta caagggctaa tggaaagcga gtattctgat
     2941 ttgagcgttg aagaacgact gaatgcactt gtggcggtaa tagcgtttgc aaatgaagga
     3001 aattctattc gtgttgttct tgaggaacgg ttagaagcag caatgtcatt aaagaagcaa
     3061 atgtgggcag aggcgcaaat tgatagaaga cgtatgaggg aagatttcat ggttaaaata
     3121 ccataccctt atggtgatga tgtggcgtca aaccatcaag aaaacttggg tgacccacaa
     3181 gtggatttgg gtaataattt aagtgaaagg ttactggaac ctgcatacgc tgctgaaaaa
     3241 tggaggtcgc agttaaaatc ttttattgga cataaagcag aggagatgta cgtatacaga
     3301 tcgttgccac ttgggcaaga ccgaagaaga aatcgttact ggcaattcgt aacttgtgct
     3361 tcacagaatg atcccggttc cagcagaatt tttgttgaac tgcgtgatgg tcgttggagg
     3421 cttattgata atgaggaggg gtttaatggt cttttggcat ctttggatgt tcgtgggaat
     3481 agggaggctc atctgcattc catgttgcaa agaatcgaat cccgtttcaa agaagccatc
     3541 aataggatac aggtcaacgt ttcaggaatc gggtcaacaa cttcgggttc cagtagcccg
     3601 agcagcacta tatctattcc caatacaaac gttacagaat tttcatcttc ctttgctatt
     3661 gaattaggac ttaatgaaaa cgaggtgaat aatgcgttaa aaagatacga agattttgaa
     3721 aaatggatgt ggggagaatg cttaatttta agggcatcga agtttgaaaa caccagatgt
     3781 gaaaacctgg tcggaatttg tgataattgt cgagatttgt tgtattttga ggatgaccgg
     3841 tgctcgtcct gccaaaaact acgagaaaca attctcgaca gcaatttaac atttgcgaaa
     3901 catattgctc gattcaagga aaagttaaaa cgggaatccg tgttgtatta ccgcaaccag
     3961 aaatctgttg gttctgtgag gtttagatta attaaatctc agttagcatt aattgaggct
     4021 tcacttccga tggaagctct ccaaccttct tggacgggtg attgcagaaa atcgtggtgt
     4081 gcgaagctcg ttaacgcagt aaccaccgaa acactgctag aggttctgac tttgctggag
     4141 agcgcgataa aaagggaatt cttgtctctg gatttcgaga cgacggatga gctattgggg
     4201 tctaataaca cggcagcttt atgtgcgacc ggagactgtt atactgttac tgtgcttcct
     4261 tggttgcctg aaacaacatc gtgtgtcgct ttaagactta tggaacttga cacatccatt
     4321 cattactcac tttcccaaaa agaggatgcc gaaaaagaca aaggagcaac aagtaacttg
     4381 atattgcatc cgaaatatgc tgcagtgatg aatagcgagg aaggtgacta tggtgactct
     4441 ttatttggaa gtgggagctt acaggacccg tggatcgatc cgggtacgtc gggacgaggc
     4501 cgagggcgtg gaagaggccg tggacggggc cgcggaggga gaccccagaa aagcgttggt
     4561 gccatagggt ccagatcgag aaataaaacg gttgaatcca gtggttcagg tgtgcagttg
     4621 gttgggtgga aaggacgtgc tcgtggtggt cgaggtggac gtaagcgtgg tcggggtggg
     4681 gtccagttca cacaggagaa gatggttaat gatgttgaac caaataatag tcaggagttt
     4741 ttatatgaag aaagcccggt tgtcggtttt caggaatggg atgctgaaga aaacagagac
     4801 gttcgtgttg cggaaaacgg tagcagttca gaatacgaga ttgaagaaga gaacaatggg
     4861 gttgatgagt acagcgatat gctggtggac gacgggtatc agaacgttta tgatcatcgt
     4921 gtggcacctc gagagtatat cagggatgat catttagaag gggaagaaga tgatgatgtt
     4981 ggtgtggaga tggacgaaga tgatgatgat gaacaagagg gcgtggacgt tgatggtttt
     5041 ttcaatgatg attcagatga aaatcgggat gtagatgatg gaaggcagat tagaaataat
     5101 aataatacag gtgatgagac agagttgtct tcatcgggtt atagtgatta gcagaacttg
     5161 ttttaacatc tgtttagtgg tgtaatgtag tagtagctgt tgtagtttag tgaagctcca
     5221 gatgagtttg cttgagttga ttgtattttg tgtagatctg aaatatagga gaaaagctat
     5281 gtaacgatga tgaaggcaca gataaatcag gtaaaccttt ataattactc cgtagtaatt
     5341 taacaatctg ttagcactta
//
LOCUS       XM_071829744            2477 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides long chain acyl-CoA
            synthetase 4-like (LOC139839622), transcript variant X1, mRNA.
ACCESSION   XM_071829744
VERSION     XM_071829744.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2477
                     /gene="LOC139839622"
                     /note="long chain acyl-CoA synthetase 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins"
                     /db_xref="GeneID:139839622"
     CDS             248..2233
                     /gene="LOC139839622"
                     /codon_start=1
                     /product="long chain acyl-CoA synthetase 4-like isoform
                     X1"
                     /protein_id="XP_071685845.1"
                     /db_xref="GeneID:139839622"
                     /translation="MTSSKKFIVEVEPAIPAKDGKPSAGPVYRSVFAKHGFPAPVDGL
                     DSCWDVFRLSVEKNPNNRMLGTREFVNGKHGAYVWLTYKQVYDKVIKVGNAIRACGVE
                     PGGRCGIYGANCAEWIMSMEACNAHGLYCVPLYDTLGAGAIEFIICHAEVTIAFVEEK
                     KIPELLKTFPTAGEYLKTIVSFGKVTPEQREQAENFGLIIHSWDDFLSMGDDKNFDLP
                     LKKKTDICTIMYTSGTTGDPKGVLISNKNMTTLIAGVNGILDNTNVSLSQHDVYISFL
                     PLAHIFDRLIEECFIFHGASIGFWRGDVKLLIEDIAELKPTIFCAVPRVLDRIYSGLQ
                     QKISAGGFLKRSFFNLAYAHKLSNMKGGKSHSEASPLSDKIVFSKVKEGLGGKVRLIV
                     SGAAPLAPHVEAYLKVVTCSHVLQGYGLTETCAGSFISLPNEMGMLGTVGPPVPNLDA
                     RLESVPEMNYDACSSKPQGEICIRGDVLFSGYHKREDLTKEVLVDGWFHTGDIGEWQP
                     DGSMKIIDRKKNIFKLSQGEYVAVENLENVYGNVSDIDAVWIYGNSFEFCLVAVVNPN
                     KAAVEHYAEAHNISGDFDSLCENPKIKEYILGELTRVGKEKKLKGFEFVKAVHLDPVP
                     FDMERDLLTPTFKKKRPQMLKYYQDIIDNMYKTINKK"
     misc_feature    248..2230
                     /gene="LOC139839622"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; Region: Adenylate forming
                     domain, Class I superfamily; cl17068"
                     /db_xref="CDD:473059"
     misc_feature    order(929..931,938..955,959..964)
                     /gene="LOC139839622"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"
                     /db_xref="CDD:341250"
     misc_feature    order(938..940,1298..1303,1493..1510,1751..1753,
                     1787..1789,1796..1798,1832..1834,2150..2152)
                     /gene="LOC139839622"
                     /note="putative AMP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:341250"
     misc_feature    order(938..940,1073..1078,1211..1213,1217..1222,
                     1229..1231,1298..1303,1493..1510,1751..1753,1787..1789,
                     1796..1798,1823..1834,2081..2083)
                     /gene="LOC139839622"
                     /note="putative active site [active]"
                     /db_xref="CDD:341250"
     misc_feature    order(1073..1075,1217..1222,1229..1231,1298..1300,
                     1823..1831,2075..2077,2081..2083)
                     /gene="LOC139839622"
                     /note="putative CoA binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:341250"
ORIGIN      
        1 taataatccg aagtcaatgg tgttaggcct cagttataag atggaaatct gtcttgtttg
       61 tttctttata ataactcctc agccaccaat ctactcctat tcttatttct atctccctca
      121 tgaatccaca ttcaacacct cttaatttac tacccacatc acgcttataa tatatttatt
      181 tttattcgtt tataataact ataactatta taattactta agattaagaa gagactgaga
      241 tcagagaatg acgtcgtcaa agaagtttat agttgaagtt gaaccggcga ttccggccaa
      301 agatggaaaa ccgtcggctg gaccggttta tcgtagtgtc tttgccaaac acggttttcc
      361 agctcctgtt gacggtttag attcctgctg ggatgttttc cgcctatctg tggagaaaaa
      421 ccccaataat cgaatgcttg gcacccgtga atttgttaac ggaaagcatg gagcatacgt
      481 atggttgaca tacaaacaag tttatgacaa ggtgataaag gttggaaatg ctatccgtgc
      541 gtgtggtgtc gaacctggtg gtcggtgtgg aatctatggt gccaattgtg cagaatggat
      601 tatgagcatg gaggcatgta atgctcatgg gctttactgt gttcctttat atgatacctt
      661 aggtgctggt gcaattgaat tcattatatg ccatgccgag gttacaattg cttttgttga
      721 agagaaaaag atccctgagt tgttaaaaac atttccgaca gctggagaat atcttaaaac
      781 aattgtaagc tttggtaaag ttactcctga acaaagagaa caagcagaaa atttcggttt
      841 gataatacat tcttgggatg atttcttgtc aatgggtgat gataaaaact ttgacctgcc
      901 attgaagaaa aaaaccgaca tttgtacgat aatgtacact agtggaacaa ctggtgatcc
      961 taagggtgtt ttaatttcaa ataaaaacat gacaacactt atagctgggg tcaatggtat
     1021 actagataat acaaatgtgt cgttaagtca acatgatgtc tatatctcgt ttctacctct
     1081 agcacatata tttgaccggt tgatagaaga atgttttatc tttcatggag catctatagg
     1141 attctggcgt ggggatgtta aattgctgat tgaagacatt gcggagctga aacctactat
     1201 tttttgtgca gttcctcgag tgctggatag gatttattca ggtttacaac agaaaatttc
     1261 tgccgggggt tttctcaaac gtagcttttt taatctagct tatgcacaca agttaagtaa
     1321 tatgaagggt gggaaatcac attcagaggc atctccatta agtgacaaaa ttgtcttcag
     1381 taaggttaaa gagggcctag gagggaaagt acgacttatt gtatctgggg ctgctccatt
     1441 agctcctcat gtagaagcat acctgaaagt agtgacatgt agtcacgttc ttcaaggata
     1501 cggcctgaca gaaacttgtg ctggatcatt tatctcgcta ccaaacgaaa tgggtatgct
     1561 gggtacagtt ggccccccag taccaaatct agatgcccga cttgagtctg ttccggagat
     1621 gaactacgac gcttgttcaa gtaaaccgca aggagaaata tgtattagag gggatgttct
     1681 gttttcagga taccataaac gtgaggacct tacaaaagaa gtcctcgttg atggatggtt
     1741 tcatacaggt gatattggtg agtggcaacc agatggaagc atgaaaatta ttgaccgaaa
     1801 gaaaaacatt ttcaagcttt cgcaaggaga gtacgtggcg gttgaaaatc tcgagaatgt
     1861 ttatggaaat gtttctgaca tcgatgcagt atggatatac gggaacagct tcgagttttg
     1921 tcttgttgct gtggtcaacc caaataaggc ggcagtcgaa cattatgctg aagcacataa
     1981 tatttctggg gattttgatt cgctatgtga aaatcctaaa atcaaagaat acatactcgg
     2041 agagctcact agagttggaa aagagaaaaa attaaaaggt tttgaattcg tcaaagctgt
     2101 tcaccttgac cctgttcctt ttgacatgga acgtgacctt ttgaccccaa ctttcaagaa
     2161 gaaaaggccc cagatgctta aatactacca ggatataatt gataacatgt acaagactat
     2221 taacaagaag tgaattgcta catgatggtg tcatatcttc tctacctgat tgaaactttt
     2281 ctatcacatt ttacaagctc tggatttgtt atgaacatta tatcgtttga tattctgttg
     2341 tacagctgta caataatttg ggatgattgt gtaagttaat ttctgctgca ctttacattc
     2401 tttatattga tgtgcataga actcttgtat aatgaaagaa gcgtgacatc ttattgttaa
     2461 attgaataat cttgcaa
//
LOCUS       XM_071829745            2420 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides long chain acyl-CoA
            synthetase 4-like (LOC139839622), transcript variant X2, mRNA.
ACCESSION   XM_071829745
VERSION     XM_071829745.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2420
                     /gene="LOC139839622"
                     /note="long chain acyl-CoA synthetase 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839622"
     CDS             257..2176
                     /gene="LOC139839622"
                     /codon_start=1
                     /product="long chain acyl-CoA synthetase 4-like isoform
                     X2"
                     /protein_id="XP_071685846.1"
                     /db_xref="GeneID:139839622"
                     /translation="MTSSKKFIVEVEPAIPAKDGKPSAGPVYRSVFAKHGFPAPVDGL
                     DSCWDVFRLSVEKNPNNRMLGTREFVNGKHGAYVWLTYKQVYDKVIKVGNAIRACGVE
                     PGGRCGIYGANCAEWIMSMEACNAHGLYCVPLYDTLGAGAIEFIICHAEVTIAFVEEK
                     KIPELLKTFPTAGEYLKTIVSFGKVTPEQREQAENFGLIIHSWDDFLSMGDDKNFDLP
                     LKKKTDICTIMYTSGTTGDPKGVLISNKNMTTLIAGVNGILDNTNVSLSQHDVYISFL
                     PLAHIFDRLIEECFIFHGASIGFWRGDVKLLIEDIAELKPTIFCAVPRVLDRIYSGLQ
                     QKISAGGFLKRSFFNLAYAHKLSNMKGGKSHSEASPLSDKIVFSKVKEGLGGKVRLIV
                     SGAAPLAPHVEAYLKVVTCSHVLQGYVGPPVPNLDARLESVPEMNYDACSSKPQGEIC
                     IRGDVLFSGYHKREDLTKEVLVDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYV
                     AVENLENVYGNVSDIDAVWIYGNSFEFCLVAVVNPNKAAVEHYAEAHNISGDFDSLCE
                     NPKIKEYILGELTRVGKEKKLKGFEFVKAVHLDPVPFDMERDLLTPTFKKKRPQMLKY
                     YQDIIDNMYKTINKK"
     misc_feature    257..2173
                     /gene="LOC139839622"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; Region: Adenylate forming
                     domain, Class I superfamily; cl17068"
                     /db_xref="CDD:473059"
     misc_feature    order(938..940,947..964,968..973)
                     /gene="LOC139839622"
                     /note="acyl-activating enzyme (AAE) consensus motif; other
                     site"
                     /db_xref="CDD:341250"
     misc_feature    order(947..949,1082..1087,1220..1222,1226..1231,
                     1238..1240,1307..1312,1502..1510,1694..1696,1730..1732,
                     1739..1741,1766..1777,2024..2026)
                     /gene="LOC139839622"
                     /note="putative active site [active]"
                     /db_xref="CDD:341250"
     misc_feature    order(1082..1084,1226..1231,1238..1240,1307..1309,
                     1766..1774,2018..2020,2024..2026)
                     /gene="LOC139839622"
                     /note="putative CoA binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:341250"
ORIGIN      
        1 cttaatttct aataatccga agtcaatggt gttaggcctc agttataaga tggaaatctg
       61 tcttgtttgt ttctttataa taactcctca gccaccaatc tactcctatt cttatttcta
      121 tctccctcat gaatccacat tcaacacctc ttaatttact acccacatca cgcttataat
      181 atatttattt ttattcgttt ataataacta taactattat aattacttaa gattaagaag
      241 agactgagat cagagaatga cgtcgtcaaa gaagtttata gttgaagttg aaccggcgat
      301 tccggccaaa gatggaaaac cgtcggctgg accggtttat cgtagtgtct ttgccaaaca
      361 cggttttcca gctcctgttg acggtttaga ttcctgctgg gatgttttcc gcctatctgt
      421 ggagaaaaac cccaataatc gaatgcttgg cacccgtgaa tttgttaacg gaaagcatgg
      481 agcatacgta tggttgacat acaaacaagt ttatgacaag gtgataaagg ttggaaatgc
      541 tatccgtgcg tgtggtgtcg aacctggtgg tcggtgtgga atctatggtg ccaattgtgc
      601 agaatggatt atgagcatgg aggcatgtaa tgctcatggg ctttactgtg ttcctttata
      661 tgatacctta ggtgctggtg caattgaatt cattatatgc catgccgagg ttacaattgc
      721 ttttgttgaa gagaaaaaga tccctgagtt gttaaaaaca tttccgacag ctggagaata
      781 tcttaaaaca attgtaagct ttggtaaagt tactcctgaa caaagagaac aagcagaaaa
      841 tttcggtttg ataatacatt cttgggatga tttcttgtca atgggtgatg ataaaaactt
      901 tgacctgcca ttgaagaaaa aaaccgacat ttgtacgata atgtacacta gtggaacaac
      961 tggtgatcct aagggtgttt taatttcaaa taaaaacatg acaacactta tagctggggt
     1021 caatggtata ctagataata caaatgtgtc gttaagtcaa catgatgtct atatctcgtt
     1081 tctacctcta gcacatatat ttgaccggtt gatagaagaa tgttttatct ttcatggagc
     1141 atctatagga ttctggcgtg gggatgttaa attgctgatt gaagacattg cggagctgaa
     1201 acctactatt ttttgtgcag ttcctcgagt gctggatagg atttattcag gtttacaaca
     1261 gaaaatttct gccgggggtt ttctcaaacg tagctttttt aatctagctt atgcacacaa
     1321 gttaagtaat atgaagggtg ggaaatcaca ttcagaggca tctccattaa gtgacaaaat
     1381 tgtcttcagt aaggttaaag agggcctagg agggaaagta cgacttattg tatctggggc
     1441 tgctccatta gctcctcatg tagaagcata cctgaaagta gtgacatgta gtcacgttct
     1501 tcaaggatac gttggccccc cagtaccaaa tctagatgcc cgacttgagt ctgttccgga
     1561 gatgaactac gacgcttgtt caagtaaacc gcaaggagaa atatgtatta gaggggatgt
     1621 tctgttttca ggataccata aacgtgagga ccttacaaaa gaagtcctcg ttgatggatg
     1681 gtttcataca ggtgatattg gtgagtggca accagatgga agcatgaaaa ttattgaccg
     1741 aaagaaaaac attttcaagc tttcgcaagg agagtacgtg gcggttgaaa atctcgagaa
     1801 tgtttatgga aatgtttctg acatcgatgc agtatggata tacgggaaca gcttcgagtt
     1861 ttgtcttgtt gctgtggtca acccaaataa ggcggcagtc gaacattatg ctgaagcaca
     1921 taatatttct ggggattttg attcgctatg tgaaaatcct aaaatcaaag aatacatact
     1981 cggagagctc actagagttg gaaaagagaa aaaattaaaa ggttttgaat tcgtcaaagc
     2041 tgttcacctt gaccctgttc cttttgacat ggaacgtgac cttttgaccc caactttcaa
     2101 gaagaaaagg ccccagatgc ttaaatacta ccaggatata attgataaca tgtacaagac
     2161 tattaacaag aagtgaattg ctacatgatg gtgtcatatc ttctctacct gattgaaact
     2221 tttctatcac attttacaag ctctggattt gttatgaaca ttatatcgtt tgatattctg
     2281 ttgtacagct gtacaataat ttgggatgat tgtgtaagtt aatttctgct gcactttaca
     2341 ttctttatat tgatgtgcat agaactcttg tataatgaaa gaagcgtgac atcttattgt
     2401 taaattgaat aatcttgcaa
//
LOCUS       XM_071829746            2114 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides endoglucanase 6-like
            (LOC139839623), mRNA.
ACCESSION   XM_071829746
VERSION     XM_071829746.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2114
                     /gene="LOC139839623"
                     /note="endoglucanase 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839623"
     CDS             1..1857
                     /gene="LOC139839623"
                     /codon_start=1
                     /product="endoglucanase 6-like"
                     /protein_id="XP_071685847.1"
                     /db_xref="GeneID:139839623"
                     /translation="MCSMAIISTLFVVMGVVPLALAGGHDYGAALSKSILFFEAQRSG
                     YLPGNQRVKWRGNSGLYDGKSNGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIMEYG
                     NQMGASGELNHAMEAVKWGTDYLIKAHPQPHVLYGEVGDGNTDHYCWQRPEDMTTSRY
                     AYRIDQNNPGSDLAGETAAAMAAASIVFRRSNPAYSRELLSHAYQLFDFADKYRGKYD
                     SSISVAQKYYRSVSGYADELLWAAAWMYKASGNEYYLDYLGKNGDTLGGTGWAMTEFG
                     WDVKYAGVQTLVAKFLMGGRAGNHAQVFEKYQEKAESFMCSCLGKSNQNVQKTPGGLI
                     YKQRWNNLQFVTSASFLLTVYSDYLTSARRNLHCSLGSVAPSELLAFAKSQVDYILGD
                     NPRATSYMVGYGSNYPQQVHHRGSSIVSVKVDPSFVSCRGGYATWFSRKASDPNLLTG
                     AIVGGPDAYDNFADHRDNYEQTEPATYNNAPLLGVLARLHGGHGGYNQLDAVEIPVAT
                     KPIAAQPKPNTIKEASFAVEQKPTSSWELNGRTYYRYSVVVTNKSGKMIKNISLSISK
                     LYGPVWGLTKSPNGSYGFPNWVSSLPAGKSMEFVYIHSASPATVSISSYTLA"
     misc_feature    1..1854
                     /gene="LOC139839623"
                     /note="endoglucanase; Region: PLN02171"
                     /db_xref="CDD:215115"
ORIGIN      
        1 atgtgttcaa tggcaataat tagtactctg tttgtggtaa tgggagttgt accattggct
       61 ttagcaggtg gacatgacta tggtgcagca ttaagcaaaa gcattttgtt ctttgaagct
      121 caaagatctg gttatcttcc tggaaatcaa agagttaaat ggagaggcaa ttcagggttg
      181 tatgatggca aatcaaatgg ggtggatttg gtgggaggat attatgatgc aggggataat
      241 gtgaaatttg ggctaccaat ggcatttacg gtaacaatga tgtcatggag tataatggaa
      301 tatgggaatc aaatgggtgc aagtggtgaa ctaaatcatg ctatggaagc tgttaaatgg
      361 ggtactgatt accttattaa agctcatcct caacctcatg ttctatatgg agaggtggga
      421 gacggtaata ccgatcacta ctgttggcaa agacccgaag acatgacaac ttcgcgttac
      481 gcttacagaa ttgatcaaaa taaccctggt tcagatctcg caggtgaaac agccgctgca
      541 atggctgcgg catccattgt cttccgtcgt tccaaccccg cgtattcccg agagcttctc
      601 agtcacgctt accagctatt tgattttgcc gacaaataca ggggcaaata tgacagtagc
      661 atcagtgttg cccagaagta ctatcgttct gtcagtggct atgctgatga attgttgtgg
      721 gcagctgctt ggatgtacaa ggcatccgga aatgagtact acttggatta cctcggcaaa
      781 aatggcgaca cacttggtgg gaccgggtgg gccatgaccg agtttggttg ggacgttaag
      841 tatgccggtg ttcaaaccct tgtcgctaag tttttaatgg gagggagagc tggtaatcat
      901 gctcaagttt tcgaaaagta tcaagaaaag gccgaatcgt ttatgtgttc atgccttggc
      961 aaaagtaatc aaaatgttca aaaaacgcct ggtggtttaa tttataagca acgatggaac
     1021 aacttgcaat tcgtcacaag tgcatcgttc cttctcactg tctactccga ttatttaaca
     1081 tctgcccgaa gaaatctaca ttgttctttg ggcagtgttg ccccctcaga gctacttgca
     1141 ttcgccaaat cacaggtgga ttacattctt ggagacaatc caagggctac aagttacatg
     1201 gttggatatg gaagcaacta tccgcaacaa gtgcaccata gaggttcatc gattgtgtcg
     1261 gttaaggttg acccatcttt tgttagctgc agaggtggtt atgcaacttg gtttagtaga
     1321 aaagctagtg acccgaatct tttgaccggt gctattgttg gtgggccaga tgcttatgat
     1381 aattttgctg accatcgaga caattatgag caaaccgagc ccgcaactta taacaatgca
     1441 ccacttctcg gtgttttggc taggctacat ggtggtcatg gtggctacaa ccaactagat
     1501 gcagttgaaa ttcctgttgc aactaagcct attgctgccc aaccaaagcc taacacgatt
     1561 aaagaagctt catttgcagt tgaacaaaaa ccgacaagtt catgggaatt aaatggaaga
     1621 acatactaca gatactcagt tgtggtgaca aacaaatcag ggaagatgat caagaacatt
     1681 agcttatcaa tctcgaaact ttatggtcct gtttggggat taaccaagag cccaaatggt
     1741 tcctatgggt tcccaaattg ggttagctca ttaccagctg gaaaaagtat ggagtttgtt
     1801 tacattcatt ctgcttcacc tgcaactgtc tcaatctcta gctacacgtt ggcttaagtc
     1861 aatatcaaga acgttattat ttacacgcac gtgttgaact aaaagtagtg atacataatt
     1921 tatttagtgt tttaatggtg tgtaattatg ggggaagaaa ggagtgaaga gatagtttaa
     1981 aaagtgctca tcctctttct cattctcttt gattttagct taaagtatgg atgatatagt
     2041 taagtagtaa agatagagta gagttggttt tcacttgttt ttggtgtgct acgtgttgca
     2101 aaaaaattgg taac
//
LOCUS       XM_071829747            1135 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAP1-related protein 2-like
            (LOC139839624), mRNA.
ACCESSION   XM_071829747
VERSION     XM_071829747.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1135
                     /gene="LOC139839624"
                     /note="NAP1-related protein 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839624"
     CDS             135..911
                     /gene="LOC139839624"
                     /codon_start=1
                     /product="NAP1-related protein 2-like"
                     /protein_id="XP_071685848.1"
                     /db_xref="GeneID:139839624"
                     /translation="MVADKGKKPKIAEKVVEEPIDTELVLSIEKLQEVQDELEKINEE
                     ASDKVLEVEQKYNVVRKPVYDKRSEVIKSIPDFWLTAFLSHPVLSDLLTEEDQKIFKH
                     LTTLEVEDNKDVKMGYSITFNFSPNPYFEDSKLTKTFTFIDEGTAKVTATPIKWKEGK
                     GIPNGVCDHDHEKKGNKRCHEDESFFSWFIGSQQKDEIEEINDDVAEIIREDLWINPL
                     TYFNNDADEEDDEEGDEEENGTDESEDNEDEEDDGEGEGK"
     misc_feature    249..797
                     /gene="LOC139839624"
                     /note="(NAP-L) nucleosome assembly protein -L;
                     Provisional; Region: PTZ00007; cl08298"
                     /db_xref="CDD:471807"
ORIGIN      
        1 ccaaaaaccc tattttcgct cccaaaaacc ctaaaaaaca taacccacct cctgtcttaa
       61 ctcatacaca aattctccct aaaaatatca acgaaaatct agggtttatc atatatcaaa
      121 actaggtttc aaaaatggtg gctgataaag gcaagaaacc caagatcgct gaaaaagttg
      181 ttgaagagcc aatcgacact gaacttgttt tatccattga gaagttgcaa gaagttcaag
      241 atgaacttga aaagatcaat gaggaggcta gtgacaaagt cttggaagtc gaacagaaat
      301 acaacgtcgt gcgaaagcca gtttatgata aacgcagtga agttatcaaa tcaattcctg
      361 atttttggtt gactgctttt ttgagtcacc ctgttctttc tgatcttttg actgaagaag
      421 accaaaagat attcaagcat ttgaccactt tggaagtgga agataacaaa gatgtgaaaa
      481 tgggttactc gattacattt aacttcagtc ccaacccgta ttttgaagat tcgaaactga
      541 ccaagacttt tacgttcatt gacgagggca ctgcaaaagt tacagctaca cccatcaagt
      601 ggaaagaggg caagggtatt cctaatgggg tttgcgacca tgaccatgag aagaaaggaa
      661 acaagcggtg tcacgaggat gagagcttct ttagctggtt cattggaagt caacagaaag
      721 atgaaataga agaaattaat gatgacgttg ctgaaataat tagggaggat ttgtggatca
      781 accctcttac ttactttaac aatgatgctg atgaagaaga tgatgaggaa ggagatgaag
      841 aggaaaatgg aacagatgag tctgaagaca atgaggatga agaagatgat ggtgaggggg
      901 aaggcaagtg aatgagtagt atgtgtaaag tggtttatct gtgacagtca aaaagttttc
      961 agctttaagg gcttagatgt ttctctctaa ctgtggactc atcggtggat gtttattagt
     1021 ttataaatct atattttata gtgcggcttt aatggtattt tatgaaccac aatttgctta
     1081 atatgtgaac aaggcaaaac ggagaaaaga acgttactta atctaatata tgttg
//
LOCUS       XM_071829748            2678 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839625), mRNA.
ACCESSION   XM_071829748
VERSION     XM_071829748.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2678
                     /gene="LOC139839625"
                     /note="uncharacterized LOC139839625; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139839625"
     CDS             11..2275
                     /gene="LOC139839625"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685849.1"
                     /db_xref="GeneID:139839625"
                     /translation="MHRVGIAGSASNSVRPRKEKRFTYVLNDADDTKHCAGVNCLAIL
                     KQSKPDNSSYLFTGSRDGTLKRWELTEEDATCSATFESHVDWVNDAVLAGGNTLVSCS
                     SDTTIKAWDCYSNGACKRTFRQHTDYVTCLAASEQNSNIIASGGLGGEVFIWDLEAAL
                     SPITKSIESAEDDHHGNGSNGSGSGSSMPVTSLRTISSSNNISLQTNVPQGYVPISAK
                     GHKESVYALAMNDTGTLLVSGGTEKAVRVWDPRSGSKMMKLRGHTDNIRALLLDSTGR
                     FCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL
                     STRESILLCTKDHPIQQLAMHDDGIWVATTDSSVHRWPAEGRNPQKVFQRGGSFLAGN
                     LSFSRARASLEGSTPVPVYKEPTFSIDGIPAIVQYEIMNNRRHVLTKDNAGYIKLWEI
                     TKGVVIEDYGQVSFDKKKEELFEMVSIPAWFTVDSRLGNLSVHLDTPQCFSAEMYSAD
                     LNIIEKAEDDKVNLARETLIGLLAHWLSKKKHKPGLQNGEIQASRSISNSKVDLDGDT
                     ENDCAVYPPFDFSKSSPPSVITEGSQNGPWRKKITEMDGTEDDKDLPWWVLDCVLHNR
                     MPTREHTKCSFYLQPYKLAGAASTQTVTQGKLSAPRILRIHKVVNYVVEKLVLDKPLD
                     SLSIDGTFAPGLSGGDGIFRSGLKPWQKLKPCIEILCNNQVLTPDMSLATVRTYIWKK
                     PEDVILNYRIVPGR"
     misc_feature    110..1123
                     /gene="LOC139839625"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    order(110..112,179..181,191..193,209..214,254..259,
                     308..310,320..322,338..343,380..385,437..439,452..454,
                     470..475,668..670,719..721,734..736,752..757,791..796,
                     848..850,860..862,878..883,917..922,971..973,986..988,
                     1004..1009,1043..1045,1097..1099,1103..1105,1121..1123)
                     /gene="LOC139839625"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    272..382
                     /gene="LOC139839625"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    395..601
                     /gene="LOC139839625"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    683..790
                     /gene="LOC139839625"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    806..916
                     /gene="LOC139839625"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    932..1045
                     /gene="LOC139839625"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1055..1123
                     /gene="LOC139839625"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1895..2257
                     /gene="LOC139839625"
                     /note="Ubiquitin-like (Ubl) domain found in WD
                     repeat-containing protein 48 (WDR48) and similar proteins;
                     Region: Ubl_WDR48; cd17041"
                     /db_xref="CDD:340561"
     misc_feature    order(1895..1906,1910..1912,1973..1981,1994..1996,
                     2006..2008)
                     /gene="LOC139839625"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340561"
     polyA_site      2678
                     /gene="LOC139839625"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaattttgca atgcaccggg tgggcatagc agggagtgcc tctaattcgg tccgtcctcg
       61 taaggagaag agatttactt atgtgttgaa tgatgctgac gacacaaagc actgtgcagg
      121 tgtgaactgc ttagctatat tgaagcaatc aaaaccagat aactcaagtt accttttcac
      181 tgggagccgt gatggcacgc ttaagagatg ggagttgacc gaggaggatg ctacctgctc
      241 agccaccttc gagtctcatg ttgactgggt aaatgatgca gtacttgcag gagggaatac
      301 tcttgtatcc tgctcttcag ataccaccat caaggcatgg gattgctatt ctaatggagc
      361 ttgcaaaagg acttttcgtc aacacacaga ttatgttact tgtcttgctg catctgaaca
      421 aaatagcaat attattgcct ctggtgggct tggtggtgag gtgttcattt gggatcttga
      481 agctgcactt tctcctatca ccaagtctat cgagtcagct gaagacgatc atcatggaaa
      541 tgggtcaaac gggtcagggt caggaagttc aatgcctgta acaagtctgc gtactatcag
      601 ttcaagtaat aatatttcat tgcaaacgaa tgtacctcaa ggatatgttc caatttctgc
      661 taaaggacat aaagagtctg tgtatgcatt agcaatgaac gatactggaa ctcttctagt
      721 ttctggtgga acagagaagg ctgtacgtgt atgggatcct agaagtggtt cgaagatgat
      781 gaagcttcga ggacatacag ataatattag ggctttgctt ctcgactcca ctgggagatt
      841 ctgcttatca ggatcctcag attctatgat cagattatgg gatcttggtc agcagcgatg
      901 tgtgcattca tatgccgttc atacagattc ggtctgggca cttgcaagca ctcctacatt
      961 cagtcatgtc tatagcggtg gacgtgattt atcgttgtac ttaactgacc tttcgacaag
     1021 ggagagtata ttactttgca caaaggatca cccaattcaa caactagcaa tgcatgatga
     1081 tggtatatgg gttgcaacaa ccgattcttc agttcataga tggcccgctg aaggtcgaaa
     1141 tcctcaaaaa gtgtttcaaa gaggtggttc ttttctagct gggaatttgt cgttttctag
     1201 ggctagggct tccttggaag gatctacacc tgttcctgtt tataaagaac caaccttcag
     1261 tattgatgga atcccagcta tcgtgcagta tgaaattatg aacaacagaa gacatgtttt
     1321 gaccaaggat aatgctgggt atataaaact ttgggagatc actaaaggtg tggtgattga
     1381 agactatgga caggtttcat ttgataagaa gaaagaagaa ttatttgaga tggtcagcat
     1441 tcctgcttgg tttacagtag atagtaggct tgggaacttg tctgtgcatt tagatactcc
     1501 acaatgcttt tcagccgaaa tgtattctgc cgatcttaac atcatcgaaa aagccgagga
     1561 tgacaaggtt aacttggcaa gagaaactct cataggactg ttggcgcatt ggctgtctaa
     1621 gaaaaagcat aaacctgggt tacaaaatgg agaaatacaa gcttctagaa gtatctcaaa
     1681 ttcaaaagtt gacttagatg gtgatactga aaatgattgt gcagtgtatc ctccgtttga
     1741 cttttcaaag tcttcccctc cttcagttat aactgagggt tcacaaaatg gaccatggag
     1801 gaaaaaaatt actgaaatgg acggaaccga agatgacaag gacctaccgt ggtgggtttt
     1861 ggattgtgtc ttgcataatc gaatgcccac acgagaacac actaagtgca gcttctattt
     1921 acagccatac aaacttgcag gtgcagcttc tacacagact gtgacacaag ggaagctgag
     1981 tgcacctcgt attttaagaa tacacaaggt tgttaattat gtggtggaga aactggttct
     2041 ggataaacca ttggatagtt tgagtatcga tggaactttt gctcctgggt tatctggagg
     2101 agacggaatc tttagatctg gactcaaacc gtggcaaaag cttaaacctt gtatagaaat
     2161 cttatgcaat aatcaggttt tgacccctga catgagctta gcaactgtgc gtacttatat
     2221 atggaaaaag cctgaagatg ttatactcaa ctacaggatc gtgcctggaa gatgatgaat
     2281 ctatgtatcc atcagagcag aaaagagcat attcagatag agtttggtgt tgtaagatgc
     2341 ttgaaggtga tactaggtag ttttatgaat ggtgaaacac ttcctgatac accaacaacc
     2401 ttgttgaagg tttttttgct attatgatat ttagtgggca gagaacatct gaattcaaag
     2461 aaatagcgct tgaatacgta aagatgatgt cgagatctga aagactgaat gtttagaaac
     2521 caagtatttt acttgcaaat aataccgttt tcagtcaacc aagtaagtta agtttgtgtt
     2581 ctgttcatgt tatttaagtg tctcatttga ttgttactat atttttgtaa ctaaagataa
     2641 ctttagagag gactgactaa gcatgatttt tatttcaa
//
LOCUS       XM_071829749            1359 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable WRKY transcription
            factor 53 (LOC139839626), mRNA.
ACCESSION   XM_071829749
VERSION     XM_071829749.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1359
                     /gene="LOC139839626"
                     /note="probable WRKY transcription factor 53; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839626"
     CDS             131..1144
                     /gene="LOC139839626"
                     /codon_start=1
                     /product="probable WRKY transcription factor 53"
                     /protein_id="XP_071685850.1"
                     /db_xref="GeneID:139839626"
                     /translation="MDTSACIINELTRGMELAKQLESILGSASSPETKHALLQEIISS
                     YDRALLMVNWVDSDTQTPPLARPILSQPESSLSIVESPQSGEFNQAFEVQQDQKVSKK
                     RKAMPTWKNQIRMSTENGLEGNTDDGYSWRKYGQKDILGAKFPRSYYRCTYRYVHNCM
                     ARKQVQRTDEDPTVFEITYRGQHTCNPTIAAAVAPPESPEKHEMKQSNNYHNHLIPPP
                     PKSGDALSNLRENLRVSTSDIDVTVPCSFSFPSASFGSVENYQEFHYSNETDNSFLQG
                     YTPSGSNYFIEWGNDFQHHDDSNLSGMISSTASATNSPLAFTADHRDLDQNYPFNNSG
                     FFI"
     misc_feature    506..685
                     /gene="LOC139839626"
                     /note="DNA binding domain; Region: WRKY; smart00774"
                     /db_xref="CDD:214815"
ORIGIN      
        1 cattcctcct cagcttctca aacacaccac atcatccaaa ctctcacctt cctcacacat
       61 gaacaactaa gcattgacat ttaaatattc aattgtacac cttgcatatt aaattgtaca
      121 caacaaagat atggacacta gtgcttgtat catcaatgag ttaacacgag gtatggaact
      181 agccaagcag ctagagtcca ttttgggctc agcatcttca cccgaaacaa aacatgcttt
      241 gctacaagag atcatatcat catatgacag agcattgttg atggtcaact gggttgactc
      301 agatactcaa acaccaccac tagcccggcc aatcctcagc cagcccgaat catcgctttc
      361 cattgtcgaa agcccacaaa gtggggagtt caatcaagca tttgaagttc aacaggacca
      421 gaaagtatcc aagaaaagga aggcaatgcc tacatggaaa aaccaaataa gaatgtcgac
      481 cgaaaatggt ttggagggaa acaccgatga cggttatagt tggaggaagt acggtcagaa
      541 agacattttg ggcgctaaat tcccaagaag ctattacaga tgcacatacc gttacgtcca
      601 caactgcatg gcaagaaaac aagtacagag aactgatgag gaccccacag tatttgaaat
      661 cacatacaga ggtcaacaca cctgcaatcc caccattgca gctgcggttg caccgcccga
      721 gtcacctgaa aaacatgaaa tgaaacaaag caataattat cacaaccacc taataccgcc
      781 acctccaaaa tctggagacg cgctttcaaa cctcagagaa aatctcagag tcagtacctc
      841 agatatagat gtaaccgtcc catgttcgtt ttcattcccg tcagcgtcgt ttggatccgt
      901 agaaaactac caagaatttc attattccaa tgaaaccgat aacagcttct tgcaaggata
      961 tacgccttct gggtcaaact acttcataga atggggtaac gatttccagc atcatgatga
     1021 ctcaaacctg tctggaatga tctcaagcac tgcttcagct acaaattctc cgttggcttt
     1081 caccgcagat catcgtgatc tagaccaaaa ttacccgttc aacaactcgg ggtttttcat
     1141 ctgatcttag taacatcata gtcatagata acaccgacga aaaaaatgta gcaataattt
     1201 ttgcagtacc aggttaagta tttgcagata atgattctta ctagttacta gtgtcactaa
     1261 attctgtttg taccaataga agcatctgaa ccacgcttgt acaaataaaa aagtgtaaga
     1321 ttgaataatc aatgaaaatt taattaaaga ttatataaa
//
LOCUS       XM_071829750            1267 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SEH1 (LOC139839627),
            mRNA.
ACCESSION   XM_071829750
VERSION     XM_071829750.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1267
                     /gene="LOC139839627"
                     /note="protein SEH1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139839627"
     CDS             69..1046
                     /gene="LOC139839627"
                     /codon_start=1
                     /product="protein SEH1"
                     /protein_id="XP_071685851.1"
                     /db_xref="GeneID:139839627"
                     /translation="MEKSVATLDKGTICSSWNYCAQRLATGSVDGTIAIFDTSDPASS
                     FFTSTFRFKVNDGSVVKVVWVPPEYGDAIACICSNGSLSIWEEVTQDSEPVQWKQCKV
                     FGGPMDQVLDSQFGNSLFGLKMTIAYSSGLVKVYEILDSLELKNWQLQAEFQNVTDSV
                     TKYGKASCSSASISWSPQRNEARPSSFVLGFNSDTSQLNSPKVWEFDKDHQRWLPVAE
                     LADPGDKGDQVYAVAWAPNIGRPYELIAAATSKGISIWKMASNPDSDGRLFVDKVVTF
                     PCHNNQIWQMEWDMSGMTLATTGTDGRVRLWQSNLNGVWHEQAVIETTT"
     misc_feature    108..992
                     /gene="LOC139839627"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    117..230
                     /gene="LOC139839627"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    order(144..146,156..158,174..179,228..233,291..293,
                     303..305,321..326,336..341,384..386,447..449,474..479,
                     531..536,639..641,651..653,678..683,738..743,801..803,
                     816..818,834..839,900..905,957..959,969..971,987..992)
                     /gene="LOC139839627"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    243..380
                     /gene="LOC139839627"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    399..518
                     /gene="LOC139839627"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    537..728
                     /gene="LOC139839627"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    753..893
                     /gene="LOC139839627"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    912..989
                     /gene="LOC139839627"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     polyA_site      1267
                     /gene="LOC139839627"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaacccaaaa accccttaaa actttggggg aaaattagtg agtcacgaaa acctagaaac
       61 caaatttgat ggagaaatca gttgcgacgt tagataaagg aacgatttgt tcttcatgga
      121 actactgcgc tcaaagatta gctactggtt cagttgatgg aacaatagcc atcttcgata
      181 ccagtgatcc agcttcttca ttcttcacat ccactttcag attcaaggtt aatgatggaa
      241 gtgttgtaaa agttgtttgg gtgccacctg agtatggtga tgcaattgca tgtatatgct
      301 ctaatggaag tttgtctatt tgggaagagg tgacacaaga cagtgagcct gttcagtgga
      361 agcaatgcaa agtttttggg ggaccgatgg atcaagttct agatagtcaa tttgggaact
      421 ctctctttgg tttaaagatg acaatcgctt attcaagtgg ccttgtaaaa gtctacgaga
      481 tcttagattc actggaattg aagaactggc aacttcaggc tgaatttcag aatgttacag
      541 attcagtaac gaagtatgga aaggcatcgt gttcatctgc atctatttct tggagcccac
      601 aaagaaacga ggcccgtccc tcaagtttcg tcttgggttt caactctgat acttcacagt
      661 tgaattcgcc aaaggtgtgg gaattcgata aagatcatca aagatggctt cctgttgctg
      721 aactagcaga tccaggtgat aagggtgatc aagtatatgc tgtggcatgg gctccaaaca
      781 ttggaaggcc atacgagttg atagctgctg cgacatccaa aggaatttca atatggaaaa
      841 tggcgtcaaa ccctgactct gatggaaggc tcttcgtcga taaagttgtg acattccctt
      901 gtcacaacaa tcagatctgg cagatggagt gggatatgag tggaatgaca ttagctacta
      961 ccgggactga cggcagggtc agattgtggc agtccaacct taacggagtt tggcatgaac
     1021 aagcggtcat cgaaacgacc acctgagcgt gcttatactc tctcttagat tttatctact
     1081 gaattctagc atatgtattc atcatttatt tcctcaaaga ttcttgcaag tagtgtaagt
     1141 agcacttttt atgttacatt tcacttgtta gcttatcata taaagttgtg ccatgcgaac
     1201 tggagaagcc tttcgttgat aaactttgat atttttatat aatctttaat taaattttca
     1261 ttgatta
//
LOCUS       XM_071829751             991 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839628), mRNA.
ACCESSION   XM_071829751
VERSION     XM_071829751.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..991
                     /gene="LOC139839628"
                     /note="uncharacterized LOC139839628; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839628"
     CDS             94..762
                     /gene="LOC139839628"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685852.1"
                     /db_xref="GeneID:139839628"
                     /translation="METLITSHSVSSLIFNNTSSKSHLPQSFFHNRNNLLSLQPSVKF
                     QYCFKKSSSQKGFGPYVTGASLAGQSNSTGDEQRWLLEPVGDGDSSHIGFKVTMPSAF
                     EIVSSEVTVGRVPEKADIVIPVATVSGTHAKFQKKGGDLVLTDLNSTNGTFIDEKRLA
                     PGVPYVVPPGRYVTFGDTNLAIFRVSKLKDVIPLAKSSDSEPPVELEAEGAINVTERA
                     NQNI"
     misc_feature    397..651
                     /gene="LOC139839628"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; Region: FHA;
                     COG1716"
                     /db_xref="CDD:441322"
     polyA_site      991
                     /gene="LOC139839628"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacaaataat gacttcccag gatttcaatc ttgttactac tactgatcca gtgtcaacta
       61 tccacaagat tcttgatcaa attgcaacaa aaaatggaaa ctctcatcac atctcactct
      121 gtttcatctc tcattttcaa taacacttct tcaaaatctc atcttcccca gtcattcttc
      181 cataacagaa acaacttgtt gtccctacaa ccatctgtaa agtttcaata ttgtttcaaa
      241 aagtcaagtt ctcaaaaagg gtttggacct tatgtaacag gggcttcatt ggcaggtcaa
      301 agtaattcta ctggtgatga acagagatgg cttcttgagc ctgtgggtga tggggattca
      361 agtcacatag gctttaaggt taccatgcca tcggcttttg agatagtctc aagtgaggtg
      421 actgttggac gtgtgcctga gaaagctgat atagtaatcc cagtcgcaac agtatctggt
      481 acgcatgcta aatttcaaaa gaaaggtggt gatcttgtgc tgacggattt aaacagcaca
      541 aacgggacat tcattgatga aaaacggctt gcacctggtg ttccctacgt tgtcccccct
      601 gggagatacg taacattcgg tgacacaaat ctagccattt ttcgggtttc aaagcttaaa
      661 gacgtgatac cgcttgcaaa atcaagcgac tctgagccac ctgttgagtt agaggcagaa
      721 ggggctataa atgtcacaga gcgcgcgaat caaaacattt aattatatgc aatgtataat
      781 ttgcatgagg caatacttta taatcaaatc tagcatttga agtagtttgt agaaatttta
      841 ctaaaaaatg taacgttttt cgtttgttca ggaatgtgtt acgcacttgg tgtactttca
      901 ttaatgatgt atgaaagtgg tggtgaatta tatagaatag gtgaatatct gagactggaa
      961 gtgaattgta tagaatgaat atttcggtgt g
//
LOCUS       XM_071829752             637 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin-conjugating enzyme
            E2 28 (LOC139839629), mRNA.
ACCESSION   XM_071829752
VERSION     XM_071829752.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..637
                     /gene="LOC139839629"
                     /note="ubiquitin-conjugating enzyme E2 28; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139839629"
     CDS             66..512
                     /gene="LOC139839629"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 28"
                     /protein_id="XP_071685853.1"
                     /db_xref="GeneID:139839629"
                     /translation="MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSP
                     YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
                     LLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG"
     misc_feature    72..500
                     /gene="LOC139839629"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 D1-D3 and
                     related proteins; Region: UBCc_UBE2D; cd23792"
                     /db_xref="CDD:467412"
ORIGIN      
        1 aacataattt ctttctttta tctaatttta acaaaagagg ttgaggatct tcaagggttt
       61 gtaagatggc ttcgaaacgg atcttgaaag agctcaagga tcttcagaaa gatcctccta
      121 cctcttgcag tgctggccca gtggcggaag atatgtttca ctggcaagca acgattatgg
      181 gtcctccgga tagtccttac tcgggtggag tgtttctagt tactattcat tttcctccgg
      241 actatccatt taaaccacca aaggtggctt tcaggacgaa ggttttccat ccgaacataa
      301 atagcaatgg cagcatttgt cttgatattt tgaaggagca atggagccca gctcttacta
      361 tttccaaggt tttgttgtca atatgttccc tgttaacgga cccgaatcca gatgaccctc
      421 ttgtacctga gattgctcac atgtacaaga cagacaggag caagtacgaa accacggcaa
      481 ggagctggac ccaaaagtat gccatggggt agttgctgtg tgccggtgta aacggaggaa
      541 gggacggctc ctttccttta tggttaatgc tattttatgt caaaactact aatcaagtta
      601 aatggctggc tgttgtaaga tagatttaaa aagggaa
//
LOCUS       XM_071829753            1065 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides V-type proton ATPase subunit
            E-like (LOC139839630), mRNA.
ACCESSION   XM_071829753
VERSION     XM_071829753.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1065
                     /gene="LOC139839630"
                     /note="V-type proton ATPase subunit E-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139839630"
     CDS             104..808
                     /gene="LOC139839630"
                     /codon_start=1
                     /product="V-type proton ATPase subunit E-like"
                     /protein_id="XP_071685854.1"
                     /db_xref="GeneID:139839630"
                     /translation="MNDSDVSKQIQQMVRFIRQEADEKANEISVSAEEEFNIEKLQLV
                     EAEKKKIRQEYERKQKQVEVRKKIEYSMQLNASRIKVLQAQDDLVTAMREAASKDLLN
                     VSHHKFQHHHNYEGLVKSLIVQGLLRLKEPAVLLRCRKEDVHIVNSVLHAAKAEYGEK
                     THVHEPEIIVDTIHLPPAPSHDDPHALSCSGGVVLASRDGKIVFENTLDARLDVIFRG
                     KLPEIRRRLFSQAAAA"
     misc_feature    149..787
                     /gene="LOC139839630"
                     /note="ATP synthase (E/31 kDa) subunit; Region:
                     vATP-synt_E; pfam01991"
                     /db_xref="CDD:396537"
     polyA_site      1065
                     /gene="LOC139839630"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attcaccact cgttcgatca aaccatctgc cccaatctca tcatctgaaa aaatctcgca
       61 gtcacccaaa tctatttgat tcacccaaat tcagtctcac aaaatgaatg attcagatgt
      121 ctccaaacag attcagcaga tggtcagatt catccgccaa gaagccgatg aaaaggccaa
      181 cgagatctct gtttccgcag aagaagaatt caacattgag aaattacaat tagtggaggc
      241 agagaaaaag aagatacgac aagagtatga acgcaaacag aagcaagttg aagttagaaa
      301 gaaaattgaa tattccatgc agctcaatgc gtctcgtata aaggtccttc aagctcagga
      361 tgacttggtt actgccatga gagaggcagc atcaaaggat cttttgaatg tgagccatca
      421 caagtttcaa catcatcata actacgaggg actcgtgaaa tctctcatcg tccagggttt
      481 actcagattg aaagaaccag ctgtcctgtt gcgttgccgg aaagaagacg tgcatattgt
      541 gaattctgtt ttgcacgcag caaaggcaga atatggagag aaaacacatg ttcatgaacc
      601 tgagatcata gttgacacca tccaccttcc accagcccct tctcatgacg atcctcatgc
      661 tctttcctgc tctggaggtg tagttttggc ttctcgggat ggtaaaattg tgtttgaaaa
      721 cacacttgat gctcgtttgg atgttatatt ccgtgggaaa cttccagaga tccgcaggcg
      781 gttgtttagc caggcagctg ctgcataaat ggggtgatat cttgtatctc atccatcctg
      841 ctatttgttc cgactttgtg ggccttatat gagaagaatc ggtatcggat gattttcagt
      901 gcaattcgtg ttttctcatg tcatattcat gttccaagta ttattgtcat ttgcgagtct
      961 ttgattagtg gacgccgtca ccatggcgaa agacacagtc catttgtttg aataattaaa
     1021 cgatgtttac atcgcatgta ttctttataa gatttattta tgtca
//
LOCUS       XM_071829754            1426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative 12-oxophytodienoate
            reductase 11 (LOC139839632), mRNA.
ACCESSION   XM_071829754
VERSION     XM_071829754.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1426
                     /gene="LOC139839632"
                     /note="putative 12-oxophytodienoate reductase 11; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 56 Proteins"
                     /db_xref="GeneID:139839632"
     CDS             64..1188
                     /gene="LOC139839632"
                     /codon_start=1
                     /product="putative 12-oxophytodienoate reductase 11"
                     /protein_id="XP_071685855.1"
                     /db_xref="GeneID:139839632"
                     /translation="MGDKQEKINLLTPYKMGKFDLSHRVVLAPLTRQRSYGNVPQPHA
                     ILYYSQRTTKGGLLISEATGISDTAQGYPETPGIWTKEQVEAWKPIVDAVHAKGGIFF
                     CQIWHVGRVSNTGYQPNGQAPISSSDKELTPQLRANGIDVARFTPPRKLSTDEIPLVV
                     NDFRLAARNAIEAGFDGVEIHGAHGYLIDQFLKDAINDCTDQYGGSPENRCRFALEIV
                     DAVVNEIGADKVGIRLSPFASYMESGDSNPKALGLYMAESLNAYKIVYCHMVEPRMKS
                     VGEKVECPHSLVPMRKAFKGTFISAGGYDMEDGNNALAENRTDLVAYGRLFLANPDLP
                     KRFELNAPLNKYNRETFYIPDPVIGYTDYPFLDSKEIKTT"
     misc_feature    88..1107
                     /gene="LOC139839632"
                     /note="Old yellow enzyme (OYE)-like FMN binding domain.
                     OYE was the first flavin-dependent enzyme identified,
                     however its true physiological role remains elusive to
                     this day. Each monomer of OYE contains FMN as a
                     non-covalently bound cofactor, uses NADPH as a...; Region:
                     OYE_like_FMN; cd02933"
                     /db_xref="CDD:239243"
     misc_feature    order(148..150,154..156,247..249,373..375,760..762,
                     967..969,1027..1029,1033..1041)
                     /gene="LOC139839632"
                     /note="FMN binding site [chemical binding]; other site"
                     /db_xref="CDD:239243"
     misc_feature    order(148..150,154..156,247..249,373..375,379..381,
                     400..402,604..606,613..615,619..621,760..762,781..783,
                     967..969,1027..1029,1033..1038)
                     /gene="LOC139839632"
                     /note="active site"
                     /db_xref="CDD:239243"
     misc_feature    order(154..156,379..381,604..606,613..615,619..621,
                     1036..1038)
                     /gene="LOC139839632"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:239243"
     misc_feature    619..621
                     /gene="LOC139839632"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239243"
ORIGIN      
        1 ggggtatcct ccaatatttc aatcataaaa aataattgag ttgaagatca caaggcctaa
       61 aaaatgggag ataaacaaga gaaaataaat ctactgaccc cttacaaaat gggtaaattc
      121 gatctttctc acagagttgt tttagcacct ctaacaaggc aaagatctta tggaaatgtt
      181 cctcaaccac atgctattct atattactcg caaagaacta caaaaggagg ccttcttatc
      241 tctgaagcca ctggaatttc agataccgct caagggtatc cagagacacc aggaatatgg
      301 acaaaggaac aagttgaagc atggaaacca attgtggatg ctgttcatgc taaaggcggc
      361 atctttttct gtcaaatttg gcatgtcgga agggtttcaa atacgggtta tcagccaaat
      421 ggacaagcac caatatcttc atcggacaaa gaattaacac ctcaattacg agccaatggc
      481 attgatgtcg cacgatttac acctccgagg aagttaagta cagacgaaat tcctcttgtt
      541 gttaatgatt ttagacttgc ggcaagaaat gcaatcgaag ctggttttga tggagttgag
      601 atccatgggg cccatggtta tctaattgac caattcttga aagacgcaat aaatgactgc
      661 acagatcaat acggtggctc tccagagaat cgttgtagat tcgctctaga aatagttgat
      721 gcggttgtta acgaaatagg agcggacaaa gttgggataa gattatcccc gtttgcaagt
      781 tacatggaat cgggtgactc aaatcctaaa gcgttaggcc tatacatggc tgaatcacta
      841 aatgcatata agattgttta ctgtcatatg gtagaaccaa ggatgaaatc tgtaggtgaa
      901 aaagttgagt gtccacatag tcttgtgcct atgagaaagg cgtttaaagg gacttttatt
      961 tcggccggag ggtatgatat ggaagatgga aacaatgctt tggctgaaaa ccgaacagat
     1021 ctagtggctt atggtcgttt gtttttggcg aatccggatt tgccaaaaag atttgagcta
     1081 aatgctcctc ttaataagta caatagggag acattttata ttcctgatcc tgttattggg
     1141 tacaccgatt atccgtttct tgactcgaaa gagataaaga ccacataagt ttgaagaatg
     1201 caaatactat tggttgtaaa agtaagttct gggggtgtat atcattgatc agttgggagg
     1261 gtctttgtgt tggtgatttg caaatggcaa tatatattgt atgtttcttt gttataaatc
     1321 tcatgatgtt ttgcattaca tctacttgtc attatatcta cttgtcatta ttcatccatg
     1381 tatttcaatt taaataataa tagcttcata ctatttaaag taagta
//
LOCUS       XM_071829755             584 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dirigent protein 22-like
            (LOC139839633), mRNA.
ACCESSION   XM_071829755
VERSION     XM_071829755.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..584
                     /gene="LOC139839633"
                     /note="dirigent protein 22-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139839633"
     CDS             6..575
                     /gene="LOC139839633"
                     /codon_start=1
                     /product="dirigent protein 22-like"
                     /protein_id="XP_071685856.1"
                     /db_xref="GeneID:139839633"
                     /translation="MAKMYFQITLCSIVLLSLSSVHCINQDPTAVEDWFNGLGTMTEK
                     VTKLHFYFHDIVSGNSPTAMNVAKPTSFTSLTGFGNMVMADDVLTSGPEPNSTIVGRA
                     QGIYASASMEDLGFLMTMNLAFSDGDFNGSTLSLLGRNPVLHEYREMPIVGGSGVFRM
                     ARGIATAKTYSFNLLGDAIVEYNVIVSHY"
     misc_feature    141..563
                     /gene="LOC139839633"
                     /note="Dirigent-like protein; Region: Dirigent; pfam03018"
                     /db_xref="CDD:460780"
ORIGIN      
        1 taaagatggc taagatgtac ttccaaataa ccttatgctc aattgtactg ttgtctctat
       61 cttctgttca ttgcattaat caagatccca cagctgtgga ggactggttc aatggcctag
      121 gtaccatgac tgaaaaggtc accaaacttc atttctattt ccatgacata gttagtggta
      181 atagccctac tgcaatgaat gtggctaagc ccactagctt cacctcgctc accgggtttg
      241 gcaacatggt tatggctgac gatgtgctaa cgtctgggcc cgagcccaac tcgactattg
      301 taggccgagc acaggggatt tatgcatcag cctcaatgga ggatctaggc tttttaatga
      361 cgatgaattt ggcttttagt gacggcgatt ttaatggtag tactcttagt cttttggggc
      421 ggaacccggt gttacatgag taccgtgaga tgcctattgt tggtggctcg ggtgttttca
      481 ggatggcgcg tggaattgcg actgcaaaaa cttatagttt taatcttttg ggtgatgcaa
      541 ttgttgagta taatgttatt gtgtctcact attgagttgt gatt
//
LOCUS       XM_071829756            1973 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent protein
            kinase 26-like (LOC139839634), mRNA.
ACCESSION   XM_071829756
VERSION     XM_071829756.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1973
                     /gene="LOC139839634"
                     /note="calcium-dependent protein kinase 26-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 173 Proteins"
                     /db_xref="GeneID:139839634"
     CDS             73..1746
                     /gene="LOC139839634"
                     /codon_start=1
                     /product="calcium-dependent protein kinase 26-like"
                     /protein_id="XP_071685857.1"
                     /db_xref="GeneID:139839634"
                     /translation="MGNTCRGSSAVKVNQSLNQPEKKSSSNRHNQSSSNYSSTTSKPK
                     NRVVEVPKKETKSHLNPTPEPKSPLKEATMNRHNPNQIYYVLGHKTDNIRDLYTVGQK
                     LGQGQFGTTYLCTENSTGTNYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVT
                     IKGAYEDPLYVHIVMELCNGGELFDRIIQRGQYTERKAAELTKIIVGVVEACHSLGVM
                     HRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFKDVVGSPYYVAPEVLLKHYGP
                     EADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKADIDFESDPWPVISDSGKDLIRK
                     MLCPHPEQRLTAHQVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIA
                     ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRFGSTLKDTEIRDLMDAADVDN
                     SGTIDYGEFVAATMHLNKLDREEHLVSAFQYFDKDGSGYITVDELQQACTDHNMTDFL
                     VEDIIKEADQDNDGRIDYGEFVAMMTKGNGGIGRRTMRKSLNIRKQGDQ"
     misc_feature    361..1134
                     /gene="LOC139839634"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; Region: STKc_CAMK; cd05117"
                     /db_xref="CDD:270687"
     misc_feature    order(379..393,403..405,442..444,448..450,547..549,
                     595..606,616..618,622..624,730..735,739..741,745..750,
                     754..756,793..798,805..807,847..861,865..867)
                     /gene="LOC139839634"
                     /note="active site"
                     /db_xref="CDD:270687"
     misc_feature    order(379..390,403..405,442..444,448..450,547..549,
                     595..606,616..618,745..750,754..756,793..798)
                     /gene="LOC139839634"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(391..393,616..618,622..624,730..735,739..741,
                     745..747,805..807,847..861,865..867)
                     /gene="LOC139839634"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(793..819,847..861)
                     /gene="LOC139839634"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270687"
     misc_feature    1243..1674
                     /gene="LOC139839634"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
ORIGIN      
        1 ttgatgataa tactaaaaat ggaatgaaga gaaggcttaa agtttattag tgaaggtttt
       61 tttattgttt ttatgggcaa tacatgccgt ggttcttctg ctgtaaaagt aaatcagagc
      121 ttaaatcagc ctgaaaaaaa gtcaagttcc aatagacata accagagctc atcgaactac
      181 tcatctacta cttcgaaacc taaaaatcgc gtagtcgaag ttccaaaaaa agaaaccaaa
      241 tcccatttga atcctacccc ggaaccgaaa tccccactta aagaagccac catgaaccgc
      301 cacaacccca atcagattta ttatgttctt ggtcataaaa ctgacaacat tcgtgatctt
      361 tatacggtgg gtcaaaaact cggtcaaggt cagtttggta caacttattt atgcaccgag
      421 aattcaacgg gtacaaacta tgcgtgcaag tctatttcga aaaggaagtt gatttcaaaa
      481 gaggatgtag aagatgttag gagggagatt cagataatgc accatttggc cggacataag
      541 aatattgtaa cgattaaggg tgcatatgaa gatcctttat acgttcatat cgttatggag
      601 ctttgtaatg gtggagaatt gtttgatcgg attattcaaa gagggcaata tactgaaaga
      661 aaagcagctg aattgactaa gattattgtc ggtgttgttg aagcgtgcca ttcgcttgga
      721 gtcatgcatc gagatttgaa acccgagaac tttttgttgg ttaacaagga tgatgatttt
      781 tcactcaagg ccattgattt tggactctca gttttcttca agccaggtca aattttcaag
      841 gatgtggtgg gaagcccata ttatgttgca ccagaggtgc ttttgaagca ttacggtccg
      901 gaagcagatg tgtggaccgc aggggtgata ctttatatac ttctaagtgg tgtacctccg
      961 ttttgggccg aaacacaaca agggatattt gatgcagttc tgaaggcaga tatagacttt
     1021 gaatcggacc catggcccgt tatatctgat agtgggaagg atcttattag aaagatgtta
     1081 tgtcctcatc ctgaacagcg tttaaccgct catcaagttc tctgtcatcc atggatatgt
     1141 gaaaacggtg ttgctcctga tagagcactt gatcctgcgg ttctttctcg tttgaagcag
     1201 ttctctgcca tgaataagtt aaagaaaatg gctttgcggg tgatagccga aagcttgtct
     1261 gaagaagaga ttgccgggtt gaaagaaatg ttcaaggcaa tggatacgga taacagtggt
     1321 gccattacat ttgatgaact gaaagctggt ctaagaaggt tcggttcaac gttaaaggat
     1381 acagagattc gagaccttat ggatgcggcg gatgtggata acagtgggac aattgactac
     1441 ggagaatttg ttgctgctac gatgcacttg aacaaactgg accgtgagga gcatctagtt
     1501 tctgctttcc agtattttga taaggatgga agtggttata ttacagttga tgagcttcaa
     1561 caagcgtgta cagatcacaa tatgactgat tttcttgtgg aggatatcat taaggaagcc
     1621 gatcaagata atgatggaag gattgattat ggagaatttg ttgctatgat gacaaaagga
     1681 aatggaggaa ttggaagacg aacaatgcgc aagagtctta acataagaaa gcaaggggat
     1741 caataaccga cacatcatta tatgctacca tacgaatgta attattcatt tactgtttga
     1801 ttaaagaatg ctagtgaatc aggcatggta gaattgattc agctggataa tggtttcctc
     1861 ttttatacaa ttagccagtt aatttatcga aaggttaaga gattcattcg ctatttacgg
     1921 ttttcaagtt atacttaatt atggatgatg ttcaaaacca tgtttatcta act
//
LOCUS       XM_071829757             949 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein THYLAKOID ASSEMBLY
            8, chloroplastic-like (LOC139839635), mRNA.
ACCESSION   XM_071829757
VERSION     XM_071829757.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..949
                     /gene="LOC139839635"
                     /note="protein THYLAKOID ASSEMBLY 8, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins"
                     /db_xref="GeneID:139839635"
     CDS             170..919
                     /gene="LOC139839635"
                     /codon_start=1
                     /product="protein THYLAKOID ASSEMBLY 8,
                     chloroplastic-like"
                     /protein_id="XP_071685858.1"
                     /db_xref="GeneID:139839635"
                     /translation="MNCGVYGIVCIQARMRCAFMERSNGPSLEFGKKVGRGVRMRVTM
                     RDRSKNRKPLQKGRNLSIEAIQTVQALKRASKSVDQQQVIYSKFSRLLKFDMMAILRE
                     LFRQDQSQLALTVFAEIQKEHWYKPEVTLYAEMILVLARNGLYDEVDTIYLEMKGEKG
                     RLQAKTEGFNVLLETLMSYNFIKLVMDCFELMKEVGCEPDRSTFKLLVSHLESKGETS
                     LSESVRREAQKYYGDSIEFVDEQENMEMNNT"
     misc_feature    461..535
                     /gene="LOC139839635"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    572..643
                     /gene="LOC139839635"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    659..754
                     /gene="LOC139839635"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    770..847
                     /gene="LOC139839635"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 ggtcaaatta aagaaatcct tctagatgga ttatccgggt caagtaatac taacaatcat
       61 aagaacgggt cgaatcggtc gttagaaatt taccaatata caagtctttt cgctctttgg
      121 tctttgttga atacaatcag tgtataagac aaccattgca atcagtagta tgaattgcgg
      181 tgtatatggc atcgtttgta tacaagcaag aatgcgttgt gcttttatgg aacgttcaaa
      241 cggcccatca cttgaatttg ggaagaaagt tggtagaggg gtacggatga gagtaacaat
      301 gagagacaga agcaaaaata ggaaaccctt gcagaaaggt cgaaatctga gcatcgaagc
      361 catccaaaca gttcaagcac tcaaacgcgc atctaaatcc gtagaccaac agcaagtcat
      421 ttattccaag tttagcaggt tactcaagtt tgatatgatg gccatccttc gtgaactctt
      481 tcgccaagac caatcccaat tggctcttac ggtatttgca gaaattcaaa aagagcattg
      541 gtacaaaccc gaggtaacgt tatatgctga aatgatcttg gtcttggcaa ggaatggctt
      601 gtatgatgaa gttgatacga tatatcttga aatgaaaggc gaaaaaggta gattacaggc
      661 caaaaccgag ggctttaatg tgttgttgga aactttgatg agttacaact tcattaaact
      721 agtaatggat tgctttgagt tgatgaaaga ggtaggctgt gagccagata ggtcaacatt
      781 caagttatta gtcagccatt tagagtcaaa aggcgaaaca agcctttcag aaagtgttag
      841 gagagaagct caaaaatatt atggtgattc cattgagttt gtagatgaac aagaaaatat
      901 ggaaatgaac aacacttaga actgtataat tccatatcat aacagttag
//
LOCUS       XM_071829758            1763 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger CCCH
            domain-containing protein 6-like (LOC139839636), mRNA.
ACCESSION   XM_071829758
VERSION     XM_071829758.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1763
                     /gene="LOC139839636"
                     /note="zinc finger CCCH domain-containing protein 6-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139839636"
     CDS             306..1580
                     /gene="LOC139839636"
                     /codon_start=1
                     /product="zinc finger CCCH domain-containing protein
                     6-like"
                     /protein_id="XP_071685859.1"
                     /db_xref="GeneID:139839636"
                     /translation="MRGLQKSKRVSWASDLNLCQVKLFLSDESPSQVGLGGQDHLQAK
                     ESWPWHPAGAASDDNLPPGFEGLQPTNSLQNKLSQIPLIQWRCPIRFVLDPAWQVAAG
                     EESKEVYFESQREMRVLEAVYPRPSAVPPNPASPMRPDESYYNDQNTPKIPITPIEDE
                     DVIPADPSSSSSSSMAPPTTTNGLATPGMVPGVEPDVVSAAYSALNTAMSNTTQGNLI
                     DPNLLIKLLSDPSLLEKLVSTHAPSTSSQQSQSPQPPPMPKLPPAVSLAEPPLPVHPR
                     PTQLSFSAPSSSSNTHYQLQSRAGPVHVPVPLPVSVSISASNLQSHPLPPVEVNPNAS
                     AKKDINYYKSLIQQHGGEKPETVNNNNNNSNNVQKTRDMKPKIMKPCIYFNSARGCRN
                     GANCVFQHERVSSLPEAQSAKRMKMDREITGT"
ORIGIN      
        1 atatgcagag agatttcctt ttctctctca tgacctagct actgcgtccg cccgtctcca
       61 ccataatccc actgtcatca tccatcgccg ccgtcatcac ttaacccccc aaaaaaaacc
      121 ttcattcact ccgcaacatt taaatcttca tcgtctaatt agaatcacta tcgtaaacaa
      181 gccggttact taatctaggg ttttacaata aataagagta aaattagggt tttcttattc
      241 ggatcaaaac caaatcgaat ttgggtaaat cgaatttgtt atatttgtta tcttaaatta
      301 taaacatgcg agggttgcag aaatcaaaaa gagtctcttg ggcgtcagat ttaaatctgt
      361 gtcaggtgaa gctgttttta tcggatgaat ctccgtctca agtaggtttg ggcggtcaag
      421 atcatcttca agcaaaggaa tcatggccat ggcatcctgc aggagcagct tctgatgaca
      481 atttgccacc tggatttgaa ggacttcagc ctacaaactc gttgcagaat aaattgtctc
      541 aaattcctct cattcagtgg agatgtccta tcagatttgt tttggatccc gcatggcaag
      601 tggctgctgg tgaagaaagc aaagaagttt actttgaaag tcaacgcgag atgagagtgc
      661 ttgaagcagt ctatccacgg ccatcagccg ttcctccaaa ccctgcatca cctatgagac
      721 cagacgaatc atactataac gatcagaata ctcctaagat tcctatcact cccatcgaag
      781 atgaagacgt gataccagca gatccatcat cctcttcgtc atcatctatg gcacctccta
      841 caacaaccaa tggattggcg acacctggaa tggtccctgg tgtcgaacca gatgtagtca
      901 gtgccgccta ttctgcttta aacacagcca tgtcaaacac cactcagggt aacctaatcg
      961 accctaacct gctcataaaa cttctcagcg atccaagttt acttgaaaaa ctcgtgtcga
     1021 cccatgcacc atccacatct agtcaacaaa gtcaaagtcc acaacctcca cccatgccca
     1081 aattgccgcc agctgtatct ttagctgagc caccactccc cgttcaccct cgaccaaccc
     1141 agctttcatt ttcagcacca tcttcttcca gtaacaccca ttatcaactg caaagcaggg
     1201 cgggacccgt tcatgttcct gtacccttac ctgtttctgt ctcaatttct gcttctaatc
     1261 tgcagtcaca tccactacct ccggtagagg tgaatccgaa cgcgtccgca aagaaagata
     1321 taaattatta caagagtctg attcagcagc atgggggtga aaaaccagaa acagttaata
     1381 ataataataa caatagtaat aatgttcaga aaacgaggga tatgaaaccg aaaattatga
     1441 agccgtgtat ttattttaat agcgcgaggg gatgtagaaa tggtgcaaat tgtgtattcc
     1501 agcatgaacg agttagtagt ttgcccgagg cacaaagtgc aaaaagaatg aaaatggaca
     1561 gagagataac tggtacataa tatcatctac tactgccagg tattggaatc aatatttttc
     1621 cttttgtttt tctataattt aaaattttgg tttattatgc atcatcatga ccttttttgg
     1681 gtcaagaaac tccttgtttt tctttaactc acattattat aaaggagttc aattctgtta
     1741 gcttggccta cataatgtct att
//
LOCUS       XM_071829759            1283 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides reticulon-like protein B1
            (LOC139839637), mRNA.
ACCESSION   XM_071829759
VERSION     XM_071829759.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1283
                     /gene="LOC139839637"
                     /note="reticulon-like protein B1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 32
                     Proteins"
                     /db_xref="GeneID:139839637"
     CDS             133..828
                     /gene="LOC139839637"
                     /codon_start=1
                     /product="reticulon-like protein B1"
                     /protein_id="XP_071685860.1"
                     /db_xref="GeneID:139839637"
                     /translation="MSDNEDIKAASLIHHKIKSSSSSESGDESTISAAKSKVFRLFGD
                     GKPADVFLWRDKKVSAGILGGATTIWFFFEVLEYGLLTFVCNGLILLLSLLFLWANAT
                     TFIKKSPPKIPNVVIPEEQVKQIVGVVRIEINRALAAFQDVALGKDLKKFLSVIAGLW
                     FISIIGSCCNFLTLVYILFVLVHTVPAIYEKYQDKIDTIAEKAWIEIKKQYAVFDENV
                     ISKIPRSLKDKKV"
     misc_feature    271..741
                     /gene="LOC139839637"
                     /note="Region: Reticulon; pfam02453"
                     /db_xref="CDD:460562"
ORIGIN      
        1 gttacagaat cattcctttg tgtatatata ctaccccaat tttaattcgt agatcatttt
       61 cataccaaag tcacaagaat ttaggcgttg agaattaggt cttgagatat catcaattta
      121 gtgaaggaag tcatgtcaga taacgaagat ataaaagctg catcactgat tcatcacaaa
      181 attaagtcat cgtcttcttc agagtccggt gatgaaagta caatttcagc tgctaaatcg
      241 aaggtttttc gtttatttgg tgatggaaaa ccggctgatg tgttcttatg gcgggataag
      301 aaggtatcgg ctggaatcct aggtggtgcc accaccattt ggttcttctt tgaagtgctg
      361 gagtatggct tgctaacttt cgtttgcaac gggttgatcc tattgctctc attattgttt
      421 ttgtgggcta acgccacaac ctttatcaaa aagtctccgc caaagattcc aaatgtggtc
      481 ataccagagg aacaagtaaa gcaaattgta ggtgttgtga ggattgagat aaatcgagct
      541 cttgcagcct ttcaagatgt tgcattggga aaagatttga agaagtttct atcggttatt
      601 gctggcttgt ggttcatatc tattataggc agctgctgca acttcttaac attggtctac
      661 atattattcg ttttggtcca cactgtgcct gcgatttatg agaagtatca agataagata
      721 gacacaattg cagagaaagc ctggatcgag atcaagaaac agtatgcagt ttttgatgag
      781 aacgtgatca gtaagatccc aagatcattg aaagacaaga aggtataggt gaatgctaca
      841 ttttaggtaa ttggttaggt gtttgtaatt tcatatggtc gtgaatatta ccattactca
      901 ctatgaagtt gcgtataatt gtgttgtgat ctagggtttg ggttgatttt gtgaacccat
      961 tgactcgata caactattga attgatttcg tgtctggtac catttatggt tatacgacta
     1021 ttgaattgat tttgcgcgtg ctgtacaact cgcagccaat aatgcagaat aaaaagaaag
     1081 tcgaaatgtg tcaataggtt acagaaacaa ttgtttcagt ttacatttca cattacataa
     1141 atgccaaaag tattgcattt tgtgttttta tgtaccaaac aataaaaaag aaaaataaaa
     1201 ttcatacaac atggtgtccc ttcaaagacg gtctctcgta tattcctaat tattatccac
     1261 cttacgcccc gtagtatatg tac
//
LOCUS       XM_071829760            2169 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839638), mRNA.
ACCESSION   XM_071829760
VERSION     XM_071829760.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2169
                     /gene="LOC139839638"
                     /note="uncharacterized LOC139839638; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839638"
     CDS             116..2068
                     /gene="LOC139839638"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685861.1"
                     /db_xref="GeneID:139839638"
                     /translation="MSTKRQKKFKKQQKTADVEELVSQFGFDSSLPEFVKYREKLNWL
                     IKKPCDVHWIVDWSSLKQVGLYDTVESKLRQEYLSPEGKHYFYQDWLYLICTDRYVFQ
                     DLCWEFHSTYELKEKPEGVKDKEFMTFRLRGEPHSMSLEDFTRCLKIYTEKQMGEKYF
                     WDYILSGARVSEISDIERFDPKTVWKNFSPGTSWSPPPCDGDGKVKVSCTNDLDDIYY
                     RLIHLLFSLNIFKQREDTNKVTLSDLWYLEQIRSDTRVSIPYCVAYYLRHWAVDTSKG
                     GKICGGHFVTLIGHHLGVKLKAEDDDDVSADGMFKKVLSMRGNPMIGPDEYHEVNVIS
                     MTSGVMKRYENGLKQVPVNLQALQGGWWNPDYTWEEQEEQHGRRRRYEKVKNRMEAVR
                     EMIDEVQDCTLKAPQLSNKQLTEIEEWTKKIELQVRSFRSRIGVGADMENVSGGGGGG
                     GGGGGGGRQVQEDEEKEERRRRYKMIMARMEKDQEVNLGVVIDEVREGTQEADHHPLS
                     EEELTEILEWSKKIESQLTSFRSKIGDMENGCAGGQEDDDDDDDDDDEQQQQLQPHGR
                     RYLMIMDTMEHLQSLQEVNLREMINEVRKGTRRGAQLSKEESTEIQEWSKKIESKLRS
                     FRSMIEDMENVSGVQQDEQEAPRDDI"
     polyA_site      2169
                     /gene="LOC139839638"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gacattttcc cctaaattga aaagcacacc gatctatttt ctcctacggt ttaaaacaaa
       61 aactcacgta gttgaatcaa aaatctgcta catgattttt ctctcctaat taaacatgtc
      121 tactaagagg caaaagaagt tcaagaagca acaaaaaact gctgatgtgg aggagttggt
      181 ctctcagttt gggtttgact cgagtttacc agaatttgtt aaatatcgtg agaagttaaa
      241 ctggctgatt aagaaaccgt gtgatgtgca ctggattgtg gactggtctt ctttaaaaca
      301 agttgggtta tacgacactg tagagtccaa gttgagacaa gaatacttgt caccggaagg
      361 aaaacattat ttttatcagg attggttgta tttgatttgc acggataggt atgtttttca
      421 ggacctttgc tgggagttcc attcaacgta tgaactaaaa gaaaagccgg aaggggtgaa
      481 ggataaggag ttcatgactt ttagattacg tggggagcct cacagtatgt ctttggagga
      541 ttttacgagg tgcttaaaga tttacacaga gaaacagatg ggtgagaagt acttttggga
      601 ctacattttg tcgggtgctc gggtttctga gatcagtgat attgagcgtt ttgacccaaa
      661 aacagtctgg aaaaatttta gtcccgggac atcttggtcc cccccaccct gtgatggtga
      721 cggtaaggtt aaggtctcgt gtacaaatga ccttgatgat atttactacc gtttgatcca
      781 cctgttgttt agccttaaca tttttaagca gagggaggac acgaacaagg tcaccttgtc
      841 tgacctatgg tacctggaac aaatacggtc cgatactcgt gtcagcattc cttattgtgt
      901 ggcctactat ttgagacact gggccgtcga cactagtaag ggtgggaaaa tttgtggggg
      961 gcattttgta accttaatag gccatcactt gggggtcaaa ctaaaagctg aagatgatga
     1021 tgatgtaagt gcggatggga tgttcaagaa ggtattgtct atgaggggga atcccatgat
     1081 cggtccggat gagtatcatg aggtaaatgt tatttctatg acgtcaggtg tgatgaagcg
     1141 ttatgagaat ggtcttaaac aagtacccgt taatctacaa gcattgcaag gaggatggtg
     1201 gaaccccgat tatacatggg aagaacaaga agagcaacat ggccgccgcc ggagatatga
     1261 aaaggttaag aataggatgg aggcggtaag ggaaatgatt gatgaggtcc aggattgtac
     1321 tctaaaggcc ccccagttat ctaacaagca attaactgaa attgaggaat ggaccaaaaa
     1381 aattgaattg caagtgcgta gtttccgttc gaggattggg gttggggccg atatggagaa
     1441 tgtgtctgga ggaggaggag gaggaggagg aggaggcggc ggcggcaggc aagttcaaga
     1501 agatgaagaa aaagaagagc gccgccggag atataaaatg attatggcta gaatggaaaa
     1561 ggaccaggaa gtaaatttag gggtagtgat tgatgaggta cgggaaggta ctcaagaggc
     1621 agatcaccac cccttatctg aggaggagtt aactgaaatt ctggaatggt ccaaaaaaat
     1681 tgagtcgcaa ctgaccagtt tccgttctaa gattggagat atggagaatg ggtgtgcggg
     1741 cgggcaagaa gatgatgatg atgatgatga tgatgatgat gagcagcagc agcagctgca
     1801 gccgcatggc cggagatatt taatgattat ggatacgatg gaacacctcc aatcactaca
     1861 ggaagtaaat ctaagggaaa tgattaatga ggtccggaaa ggtactcgaa ggggggccca
     1921 gttatctaag gaggaatcaa ctgaaattca ggaatggtcc aaaaaaattg aatccaaact
     1981 gcgcagtttc cggtccatga ttgaagatat ggagaatgtg tccggagttc aacaagacga
     2041 acaagaggct ccaagggatg atatatgata atatgatatg aatatatgat tgtttgtttg
     2101 tgccttcaac tgaattttct ttgatatgtt aaaaataata atatatgtat tttcttcttc
     2161 gtttattta
//
LOCUS       XM_071829761            2015 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides monodehydroascorbate
            reductase, chloroplastic/mitochondrial (LOC139839639), mRNA.
ACCESSION   XM_071829761
VERSION     XM_071829761.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2015
                     /gene="LOC139839639"
                     /note="monodehydroascorbate reductase,
                     chloroplastic/mitochondrial; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139839639"
     CDS             160..1635
                     /gene="LOC139839639"
                     /codon_start=1
                     /product="monodehydroascorbate reductase,
                     chloroplastic/mitochondrial"
                     /protein_id="XP_071685862.1"
                     /db_xref="GeneID:139839639"
                     /translation="MPSAAIIRRSMASISSSISIKHGISLWCPQSQSLNRHHHSSRSF
                     HKRNFVVSASFANQNREFVIVGGGNAAGYAARTFVEHGMADGKLCIVSKEAFAPYERP
                     ALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPDWYKEKGIEMLYEDPVTAIDAEKQT
                     LTTNSGKLLTYGSLIIATGCSASRFPETIGGNLRGVHYIRDVADADSLISSLGEAHKV
                     VVVGGGYIGMEVAAATVAWNLDTTVIFPENHLLPRLFTPSLAQKYEELYQDNGVKFIK
                     GASIKSLEAGPDGNVAAVKLGDGSTIEADLVVIGIGAKPAVSPFDKAVKLNTTVGGIE
                     VDGMFRSNVPGIFAVGDVAAFPLKMYNRISRVEHVDHARGSAHHCVKALLTAQTHNYD
                     YLPYFYSRVFEYEGSSRKVWWQFFGDNVGEAIQIGNFDPKIATFWLDSGKLKGVLLES
                     GTPEELQLLPKLARTQPSIDKVKLQSATSVEEALEIARASL"
     misc_feature    385..1503
                     /gene="LOC139839639"
                     /note="NAD(P)H-nitrite reductase, large subunit [Energy
                     production and conversion]; Region: NirB; COG1251"
                     /db_xref="CDD:440863"
ORIGIN      
        1 catacgtcct ttaccagcat caaacgacta caactgtcct ttcaacccaa cctagagcca
       61 aattcgttat catcatattt taattattgg attagtagct taattaatta atattttatt
      121 tgtattatat acacagatca taccactctc atcttcatta tgccatcagc tgctatcatt
      181 agacgatcaa tggcgagcat atcgagttcg atatcgatta agcacgggat ttcactttgg
      241 tgtcctcaat cacaatcgct caatcgtcac caccattctt ccagaagctt ccacaagaga
      301 aactttgtgg tttctgcatc atttgccaat cagaatagag agtttgtgat agttggaggt
      361 ggaaatgctg caggatatgc agctaggacg ttcgttgaac atggaatggc tgatggaaag
      421 ctatgtattg tttctaaaga ggcatttgct ccatatgagc gcccagcttt gacgaaaggt
      481 tatttatttc ctttagacaa aaagccagct cgtttaccgg ggtttcacac ctgtgtcggc
      541 tcaggaggtg agaggcagac tccggattgg tacaaggaga aaggaataga gatgctttat
      601 gaagatccag tgactgcgat tgatgcagag aagcaaacat tgactacaaa ctcaggaaaa
      661 ttgctaacat atggatccct cattattgca acggggtgct ctgcgtctag attcccggag
      721 acaattggtg ggaacttacg tggtgttcat tatatacgag atgtggctga tgctgattca
      781 ttaatatcat cactggggga agcgcataaa gtagtggtgg ttggtggtgg ctatataggc
      841 atggaagttg cagccgctac tgttgcatgg aaccttgaca caactgtcat atttcctgaa
      901 aatcatcttt tgccaaggct gttcactcct tcactggctc agaaatacga agaactatac
      961 caagataatg gtgttaagtt tataaagggt gcctctataa aaagcttgga agctggtcct
     1021 gatggaaatg ttgctgctgt taaacttgga gatggttcta ccattgaagc tgatttggtt
     1081 gttattggta ttggcgcaaa acctgctgtt agtccttttg ataaggctgt taaattaaat
     1141 acaactgttg gtggaataga ggttgacggc atgttccgaa gcaatgtacc cggaattttt
     1201 gctgttggtg atgtggcagc gttccctcta aaaatgtaca ataggatttc gcgtgtagaa
     1261 catgtggatc atgctcgtgg ttcagctcat cattgtgtga aagcattact aactgcacaa
     1321 actcataatt atgactatct tccatacttc tattcaagag ttttcgaata tgaaggaagt
     1381 tcaaggaaag tatggtggca atttttcggg gataatgtgg gtgaagcaat tcaaattggg
     1441 aattttgatc ctaagattgc caccttttgg ttggactcgg gtaaattgaa gggtgttctt
     1501 cttgaaagtg gtactccaga ggagcttcaa ttgctgccta aacttgctag gactcaacct
     1561 tctattgaca aagtcaaact tcaaagtgct acttcggttg aggaagccct tgaaattgcc
     1621 agagcttcgt tatagaggaa gttaaacacg gcataatata cgtatacgga aaagctagag
     1681 gatggatcat gattaatcta ccttgaggac atacaagatg taatgcagaa ggtttaagca
     1741 tcttgtcagc ttcattgttt gaaagcttat gtgtgaattt cctcttttag cctctgtgga
     1801 agatcattca tcaacttagc cattttaata catcagccta ctctctggtt gatgggcttg
     1861 gattgttttt tgatgataaa gttacagact tgatggctgt acattaattt ttgcacttac
     1921 tgcatcaaaa taattagtta aacaatcctt ttactttatt aaagaagtgt tttacttgag
     1981 ttatatgtgt tgtttattgt tttaacatgg tatgc
//
LOCUS       XM_071829762            1106 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839640), mRNA.
ACCESSION   XM_071829762
VERSION     XM_071829762.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1106
                     /gene="LOC139839640"
                     /note="uncharacterized LOC139839640; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139839640"
     CDS             119..871
                     /gene="LOC139839640"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685863.1"
                     /db_xref="GeneID:139839640"
                     /translation="MARSQESLDKMQLRQNYRNVWHTDLMSTMSADTPYCCFAFFCGP
                     CVSYLLRKRALYGDMSRYTCCAGYMPCSGRCGESKCPELCLGTEVFLCFGNSVASTRF
                     LLQDEFNIQTTKCDNCIIGFMFCLQQLACIFSIVACLVGSEELSEASQILNCLADMVY
                     CTVCACMQTQHKVEMDKRDGKFGPQPMMVPPVQQMSRIDQPYPPNVGYGQQPYGYPPG
                     PPPQAQGYPPAGYPPPQGYPPAQGYPAPGYQR"
     polyA_site      1106
                     /gene="LOC139839640"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acgccgttta cctttttagg gcttttctca atccagtttc aattgtattc ttcatcgatt
       61 cagagctcaa ttgattcgaa gcacaatcga tctctataga ttttaatcaa atccagttat
      121 ggcgagatct caagaatcat tggataagat gcaactccgt caaaattacc ggaatgtatg
      181 gcacactgat ctcatgagca ccatgtctgc cgatactcct tattgctgct tcgcgttttt
      241 ctgtggacca tgtgtatcat acttgcttcg taagcgagct ctctatggtg atatgtcaag
      301 gtatacatgc tgtgctggat atatgccatg cagtggaagg tgtggtgaaa gcaaatgccc
      361 cgagttatgc ctcgggactg aggtctttct gtgctttggg aactcggtag cttcaactcg
      421 gtttctattg caagatgagt ttaacataca aacaacaaaa tgcgacaatt gtatcattgg
      481 gttcatgttt tgtcttcaac aacttgcgtg catattttcc attgttgctt gccttgttgg
      541 aagtgaagaa ctcagtgagg catctcagat actcaattgc ttagctgata tggtttactg
      601 cacggtttgt gcgtgcatgc agacacagca caaggttgag atggacaaac gagatgggaa
      661 gtttggacca caacccatga tggttccacc cgtgcagcaa atgtcaagga ttgatcaacc
      721 atatccaccc aatgtcggat atggtcaaca accgtatggt taccctcccg gaccaccacc
      781 tcaagctcag ggctacccac ctgccggtta tcctccccca cagggttatc ctcctgctca
      841 gggctatcca gctccaggct accagaggta aacgtgcgaa acgtgcaaat gattgaaaca
      901 agtggttttg tggattctat ctttttattt attgatacag ttgaactttt tgtggagtct
      961 aagaatatgc tgtacatgac acttatattt gcttgatatt tggtttattg ttggacgttt
     1021 gtcgtgtccc cgttcgtggt tctgtttgca cttgttatac cttattgggt tcatatgaag
     1081 tataaactcg gtgcttttgg tgttca
//
LOCUS       XM_071829763            1818 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytokinin dehydrogenase
            5-like (LOC139839642), mRNA.
ACCESSION   XM_071829763
VERSION     XM_071829763.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1818
                     /gene="LOC139839642"
                     /note="cytokinin dehydrogenase 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139839642"
     CDS             118..1692
                     /gene="LOC139839642"
                     /codon_start=1
                     /product="cytokinin dehydrogenase 5-like"
                     /protein_id="XP_071685864.1"
                     /db_xref="GeneID:139839642"
                     /translation="MVAKLLLLTAIYHLIVIVGSIDHHLLVETTSTHLSINKTEMESV
                     SRDFGNIKITQPGAILHPSSTQDIVNLLKLAYESPEGFVVSARGHGHSINGQAQVGEN
                     GVVVQMSGTSLGPAPIVLEKLMYVDVWGGELWIDVLKSTLKYGLAPKSWTDYLYLSVG
                     GTISNAGISGQAFNHGPQISNIHELEVVIGKGEVVTCAEDKNSELFHAVLGGLGQFGI
                     ITRARIALEPSPQRVRWIRILYSNFSGFTHDQEYLISLHGQPRSKKFDYIEGFVIVDE
                     GLINNWRSSFFSPSNPIKISSIAADHGNVLYCLEITKNYYHHSDPESINQEVEALLKK
                     LNYIPESVFTTDLPYVDFLNRVHKAELKLRSKGLWDVPHPWLNLFVPKSRIDDFNKGV
                     FKGILGNKTSGPILIYPMNKNKWDEETSVVTPNEDVFYLVALLRSALHSSDKAQTLER
                     LSDENRQILSFCKDQNIGVKQYLPHYTTQQEWIDHHGEKWHKFSKRKMEFDPRHILAT
                     GQRIFVPDFNSKTRTS"
     misc_feature    127..1656
                     /gene="LOC139839642"
                     /note="cytokinin dehydrogenase; Region: PLN02441"
                     /db_xref="CDD:215242"
     polyA_site      1818
                     /gene="LOC139839642"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccacttcatt ctcctatatt tcttttctac tatcagaaaa attaattaat aattaaaaaa
       61 aaaaacaaac tttctaatgt tagcaactat aacccggcct tgatcaaaca tcgaatcatg
      121 gtggctaagc tcctactctt gaccgcaatt taccatctaa tcgtgatcgt tggatcaatc
      181 gatcaccatc ttttagtcga aacaaccagc actcacttga gcatcaacaa aaccgaaatg
      241 gaatcagtat caagggattt tggaaatata aaaattaccc aaccgggagc aatactacat
      301 cctagttcga ctcaagacat cgtgaatctt ttgaaactcg cttacgaatc tcctgaagga
      361 ttcgtagtgt cagcaagagg ccatggccat tcaataaatg gccaagctca ggtgggtgaa
      421 aatggagttg tggtacaaat gagcgggact tcactaggtc ccgcaccaat tgttttagag
      481 aaattgatgt atgttgatgt gtggggtggt gaactttgga ttgatgtgtt aaagtctacg
      541 ttaaaatatg gactggcacc aaaatcatgg actgattact tgtacctttc tgttggtggt
      601 acaatatcta atgcgggaat tagtggtcaa gcttttaatc atggacctca aattagtaat
      661 attcatgagc ttgaagtcgt catcggaaaa ggtgaggtgg tgacatgcgc agaggataaa
      721 aactcggaat tatttcatgc ggttttggga ggattaggac aatttggaat tatcacaagg
      781 gctagaattg cattggagcc ttcccctcaa agggtgagat ggatccggat attgtattca
      841 aatttttcgg gttttactca tgatcaagag taccttatct ccctccatgg tcaaccaagg
      901 tcaaaaaagt ttgactatat tgaaggtttt gttattgtgg atgaaggttt aatcaacaat
      961 tggaggtcct cttttttctc tccaagcaac cctatcaaaa tctcatccat tgctgctgat
     1021 catggcaacg tcttatactg ccttgaaatc accaagaact attaccatca ctccgacccc
     1081 gaatctatca atcaggaagt ggaagctttg ttaaagaagt taaattatat accagaatca
     1141 gtgttcacca ctgaccttcc atatgtagat ttcttgaacc gggttcacaa agcagagttg
     1201 aaactccggt ccaagggctt atgggatgta ccccacccat ggcttaattt gtttgtaccc
     1261 aaatcaagaa tcgatgattt taacaaagga gtgttcaagg gcattttggg aaataaaact
     1321 agtgggccca ttctcatata ccctatgaac aaaaataagt gggatgagga gacttcggtt
     1381 gtgacgccaa acgaggacgt attttatttg gtagctttac taagatccgc attgcatagc
     1441 agtgataaag cacaaacact agaacgctta agtgatgaaa atcgtcaaat tttgagcttc
     1501 tgtaaagatc aaaatatcgg tgtcaagcag tatttaccgc attacaccac acaacaagag
     1561 tggattgatc atcatggcga aaaatggcat aaatttagca agaggaaaat ggagtttgat
     1621 cctcgtcata tattagcaac gggtcaaaga atatttgtgc ctgattttaa ttctaagacg
     1681 agaacatctt agtgatagga gaaatttaaa ggaaataagc ataaaattaa ggggaagaat
     1741 tatagtacat aaagatagat agtatgtaga tcagaactga ccattattat tttcattatt
     1801 gatataatgt ttttagtt
//
LOCUS       XM_071829764            3060 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-adaptin-like protein B
            (LOC139839643), mRNA.
ACCESSION   XM_071829764
VERSION     XM_071829764.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3060
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3060
                     /gene="LOC139839643"
                     /note="beta-adaptin-like protein B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839643"
     CDS             103..2781
                     /gene="LOC139839643"
                     /codon_start=1
                     /product="beta-adaptin-like protein B"
                     /protein_id="XP_071685865.1"
                     /db_xref="GeneID:139839643"
                     /translation="MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMT
                     VGKDVSSLFTDVLNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
                     LIRALAVRTMGCIRVDKITEYLCDPLERCLKDDDPYVRKTAAICVAKLYDINAELVED
                     RGFLDALKDLISDNNPMVVANAVAALAEIQDNSSKPIFEITSNTLTKLLTALNECTEW
                     GQVFILDALSKYKAADAREAENIVERVTPRLQHANSAVVLSAVKMIMQQMELITSPDV
                     IRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYV
                     KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLDRAAERCI
                     SVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIW
                     IIGEYAERIDNADELLESFLETFPEEPAQVQLQLLTATVKLFLKKPTEGPQKMIQVVL
                     NNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQYDSSLLDELLA
                     NIATVSSVYHKPPETFITRVKTVQTTEEEFPDGEGGYSETSSTLVADNGASPPPYSSA
                     TSKQPTAAPVPDLLDLMGLEGGDDNAVIPVDQPQIAAGPPLPVLLPAATGQGLQISGQ
                     LVRRDGQTFYSLMFENNTNIPLDGFMIQFNKNTFGLAAGGPLQVPQIQPGTSARTLLP
                     MVLFQNIAPGPPNSLLQIAVKNNQQPVWYFNDRLSLLTLFTEDGRMERSTFLETWKSL
                     PDSNEVSMDIPGIVINNVEATIEQLGNSNMFFIAKRKNGNQEVLYLSGKIPKGIPFLI
                     ELTATIGVPGLKCAIKSPSPEMGPLFFEALETLLRG"
     misc_feature    139..1707
                     /gene="LOC139839643"
                     /note="Adaptin N terminal region; Region: Adaptin_N;
                     pfam01602"
                     /db_xref="CDD:396262"
     misc_feature    268..333
                     /gene="LOC139839643"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    order(307..312,319..321,328..333,418..423,430..432,
                     439..444,523..528,535..537,544..549,556..558,640..645,
                     652..654,661..666,763..768,775..777,784..789)
                     /gene="LOC139839643"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    367..450
                     /gene="LOC139839643"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    469..561
                     /gene="LOC139839643"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    586..666
                     /gene="LOC139839643"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    703..789
                     /gene="LOC139839643"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    2125..2412
                     /gene="LOC139839643"
                     /note="Adaptin C-terminal domain; Region: Alpha_adaptinC2;
                     smart00809"
                     /db_xref="CDD:197886"
     misc_feature    2443..2772
                     /gene="LOC139839643"
                     /note="Beta2-adaptin appendage, C-terminal sub-domain;
                     Region: B2-adapt-app_C; pfam09066"
                     /db_xref="CDD:462667"
ORIGIN      
        1 tctccatttg cacacctctg tcaaaattca accctcaccg tctaccatcg atattttcct
       61 ccgtcgattt gccgtcgtcg actccgataa ccgacgtcca aaatgagtgg tcacgattcg
      121 aagtatttct ccactactaa aaagggagaa atccctgagc ttaaagaaga gctcaattct
      181 caatacaagg ataagagaaa agatgctgtc aaaaaagtga ttgctgctat gactgttgga
      241 aaggatgttt catcactatt cacggatgtc ctgaactgta tgcagacaga aaatttggaa
      301 ctcaaaaagc ttgtttactt gtatctcatc aattacgcta aaagtcaacc tgacctggcc
      361 atacttgccg tcaatacatt tgtgaaggat tcacaggacc cgaatccttt gatccgtgct
      421 ttagctgtta gaacaatggg atgcattcga gttgataaaa tcacagagta tctttgtgat
      481 cccctcgaaa ggtgtctcaa ggatgatgat ccttatgttc gaaagacagc agcaatatgc
      541 gttgctaaac tttatgacat caatgctgag ttagttgaag ataggggttt tcttgatgct
      601 ctcaaggatt tgatatctga caataaccct atggtggtag cgaatgctgt tgcagctctt
      661 gctgaaatcc aagataacag cagtaaaccc atcttcgaga tcaccagcaa cacacttaca
      721 aagctcctca cagctttaaa tgaatgcact gagtggggtc aagttttcat tttagatgct
      781 ctttccaagt acaaggcggc cgatgctcgt gaagccgaaa atatcgtaga gagagtcacc
      841 cccagactac aacatgcaaa ttctgctgta gtactttcag ccgttaagat gattatgcaa
      901 caaatggaac tcataactag tcccgatgtg attcgaaacc tctgcaagaa aatggctcct
      961 cctcttgtaa cattactttc tgcagaacct gagattcaat atgttgcatt aaggaacatc
     1021 aaccttattg tacaacggcg tcctacaatc cttgcccatg aaattaaggt gttcttctgc
     1081 aagtacaatg atccaatata tgtgaagatg gagaaattgg agatcatgat aaagcttgct
     1141 tcagatagaa atatcgatca ggtgctgttg gagtttaaag aatatgctac tgaagtagat
     1201 gtggattttg tcagaaaggc tgttcgtgct attgggcgct gtgctattaa attagataga
     1261 gcagctgagc gttgtatcag tgttcttcta gaacttatca aaattaaagt aaattatgtt
     1321 gttcaagaag ctattatagt catcaaggat atctttagaa gatatcctaa cacttatgaa
     1381 tccattattg caacgctttg tgagagtttg gacactttgg atgagccaga ggcgaaggcg
     1441 tcaatgattt ggataattgg tgaatatgct gaaagaattg ataatgctga tgaacttctt
     1501 gaaagttttc tggagacttt tcctgaagaa cctgcacaag tccaattgca gttgttgaca
     1561 gccacagtca aactttttct gaaaaaacca actgaaggac ctcagaaaat gattcaggtt
     1621 gttctgaata atgccacagt agagactgac aatcccgatc tgcgagatcg tgcttacata
     1681 tactggcgtc ttctttcaac tgatcctgag gctgctaaag atgtcgtatt agctgagaag
     1741 ccggtaatca gtgacgattc taatcaatac gattcatctc tcctcgatga gcttcttgca
     1801 aacattgcta cagtgtcctc tgtataccat aaaccccctg aaacatttat aacacgtgta
     1861 aaaactgttc aaacaactga agaagagttt cctgatggtg aaggagggta ttctgaaaca
     1921 tcatctacat tggttgctga caatggtgca tcaccgccac cttattcttc agccacctca
     1981 aaacagccaa ccgctgctcc tgttccagat ttacttgatc tgatgggtct tgaaggtggt
     2041 gatgataatg ctgtgatccc ggttgatcag cctcagatag ctgctgggcc tcctctgcct
     2101 gtgttattac cggcggcaac gggtcaaggt ctacaaatta gtgggcagct ggtacggagg
     2161 gatggtcaga cattttacag tttaatgttc gagaacaaca caaatatacc attggatgga
     2221 tttatgattc agttcaacaa gaatacattt gggcttgcag ctggtggtcc acttcaggtc
     2281 ccacaaattc aaccaggaac atcagcaaga acacttcttc cgatggttct gttccagaat
     2341 atagcaccag gtccaccaaa ctcacttttg cagatcgcgg taaagaacaa ccaacagcct
     2401 gtgtggtact ttaatgatag attgtcattg cttaccttgt ttaccgaaga tggaagaatg
     2461 gaacgttcca ccttccttga gacatggaag tcattaccag actcgaacga ggtatcaatg
     2521 gacattccag gcattgtgat aaacaacgtg gaggcaacaa tagagcagct gggtaattcc
     2581 aacatgtttt ttatcgccaa gcgtaagaac gggaatcaag aggttttata tctctctggc
     2641 aaaatcccta aaggaatccc tttcttgatc gaacttacag caaccattgg tgttccagga
     2701 ctcaagtgtg ccattaaatc tccaagccca gaaatgggcc cattgttctt tgaagccctt
     2761 gagactctac tcaggggttg attcgtatct tgcagtttgg ttgacttgtt tgtacgattt
     2821 ttttgccagt gttggtgtcc catcatagtt cgcagaagac gttgccgtat tttagttaat
     2881 ctcgagtctt tcgtagctgt gttaatcatg actagataat tatatgtttt acaggtgatg
     2941 agttttcaaa ccgttgtatt tgtttattta tccaatattt gaataatctt atatttaatc
     3001 tgtgtgaaca tgtcagttgt gtttaatatt gatttattaa tgaagtgtgt ttacaattgt
//
LOCUS       XM_071829765            2043 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable hexosyltransferase
            MUCI70 (LOC139839644), transcript variant X1, mRNA.
ACCESSION   XM_071829765
VERSION     XM_071829765.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2043
                     /gene="LOC139839644"
                     /note="probable hexosyltransferase MUCI70; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839644"
     CDS             364..2043
                     /gene="LOC139839644"
                     /codon_start=1
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /protein_id="XP_071685866.1"
                     /db_xref="GeneID:139839644"
                     /translation="MPENRLFCFFQFRYRYFCLFERDDEQKIDMRVVIEYGELYGEYL
                     GFWDGSIYFDVKYNRAVSMDIDVHHFVSLRASRRPDSLNDNFDNKGGDGFFDGGNSSS
                     DYPIKIIGKRGIVRLLLVGGIMWMLLILVVLLFHIWSCQSSLVFLSATCNKDSTIYHV
                     LLTMGLVTPPHRCSIPLARDPEKVVIPDKSSPSQFVQSLSYFEVDDANTNGSDSFPLF
                     GGHQRWKQRDDSFKLKSSMKVHCGFMRDGGADMSLKDIEYVKKCKFVVASGIFDKYDT
                     PHQPSNVSPRSKKLFCFLMVVDEISLDFIKQNVTVREDNNGGEWVGIWRIILLKHPPY
                     DEPRRNGKVPKILTHRLFPQAIYSIWIDGKMELIVDPLLMLERYLWRGKHTFAIAQHK
                     HHKNIYEEADSNKRRKKYARPLIDRHMKIYRYEGLEPWSPLKQTISDVPEGAIIIREH
                     TALNNLFSCLWFNEVNLFTPRDQLSFGFVVYRLKGQFKFFMFPNCEYNSIFILHPHTR
                     EHSSDIEWVKEFKGNNSGLKESRGGLGLWSPYPADLNSVVLPPVARTSKAG"
     misc_feature    991..1881
                     /gene="LOC139839644"
                     /note="Protein of unknown function (DUF616); Region:
                     DUF616; pfam04765"
                     /db_xref="CDD:428112"
ORIGIN      
        1 gcaaaatcca atatcatata tctaatccca atccagtatc caatatctta tcaaaaacca
       61 atacatgttc tagtattttc aaaataaaat caataagcaa aaataatata ataacaaatc
      121 aaacaatcga tggccatatc catacatctt ttctagtata ttacacaaca cgaaacaaaa
      181 gaaattgttt acgggatgta aaacgataac tatatcatac aatttttcta gcttgtttcc
      241 accaaaatcg aaggaagatg gcgatttggg ttaccatttg ctggagcagg gggccggaga
      301 gaagagggcc ggagcagggg ggccggagag aaggggcgtc ggagtagaag tgtcggagct
      361 gggatgccgg agaatcgact tttttgtttc tttcagttta ggtatcggta tttttgcctt
      421 tttgagagag atgatgaaca aaagatagat atgagggtag tgatcgaata tggagagcta
      481 tatggggagt acttaggttt ttgggatggt tcaatttact ttgatgttaa atataataga
      541 gctgtaagta tggatatcga cgttcaccat ttcgtttcct tacgagcaag ccgtagacct
      601 gacagtttaa atgataactt cgataataaa ggtggagatg gttttttcga tggaggcaat
      661 tcatcctcag attacccaat taaaataatc gggaaaaggg gaattgttcg tttgctacta
      721 gtgggtggta ttatgtggat gctgctcatt ctagttgtac tattgtttca tatatggagt
      781 tgccaatctt cacttgtttt cctctcagct acctgtaata aagacagcac aatatatcat
      841 gtgctactca caatggggct agtaacacct ccgcatcgct gttctattcc cttagccagg
      901 gacccggaga aagtagtgat tccggataaa agttctcctt cacagtttgt gcaaagtcta
      961 tcctactttg aggtggatga tgcaaataca aacggttcag attcttttcc actattcggt
     1021 gggcatcaaa gatggaaaca aagagacgat agttttaagc taaaatcgag catgaaggtg
     1081 cattgtgggt ttatgcgaga tggtggtgca gatatgtctc tcaaagacat tgaatatgtc
     1141 aagaaatgta aatttgtggt tgcttctgga atcttcgata agtatgatac acctcatcaa
     1201 ccatcaaatg taagtccacg atcgaagaag ttgttttgtt ttcttatggt ggtggatgaa
     1261 atatcgttag attttatcaa acaaaatgtt acggtgcgag aagataataa cgggggagaa
     1321 tgggtaggaa tatggcgtat tattctgctt aagcatccac cgtatgacga gcctagacga
     1381 aacgggaagg ttcctaagat attgactcat aggctctttc ctcaagctat ttacagtatt
     1441 tggatcgatg ggaaaatgga actaattgtt gacccgttgc ttatgttgga gagatatctg
     1501 tggcgtggga agcatacatt tgccatagct caacacaagc atcataagaa tatttatgag
     1561 gaggctgatt ctaacaagcg aaggaagaaa tatgctcggc ctttaattga tcgccacatg
     1621 aaaatttatc gctatgaggg attggaacct tggagcccat taaagcaaac tataagtgat
     1681 gtaccagaag gggctataat catacgtgaa catacggcac taaataactt atttagctgt
     1741 ttgtggttca acgaagtaaa tctatttaca ccaagagatc aattgagctt tgggttcgtt
     1801 gtctacagac taaagggcca attcaagttt ttcatgttcc cgaattgtga atataattca
     1861 atatttatac tgcacccaca tactcgtgaa cattcatctg atatcgagtg ggtgaaagag
     1921 tttaaaggca acaacagtgg tttaaaagaa agcagaggag gattagggct ttggtcaccc
     1981 tatcctgctg atcttaattc agttgtactt ccacccgtag caagaacatc caaagctgga
     2041 tga
//
LOCUS       XM_071829767            1673 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable hexosyltransferase
            MUCI70 (LOC139839644), transcript variant X2, mRNA.
ACCESSION   XM_071829767
VERSION     XM_071829767.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1673
                     /gene="LOC139839644"
                     /note="probable hexosyltransferase MUCI70; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839644"
     CDS             180..1673
                     /gene="LOC139839644"
                     /codon_start=1
                     /product="probable hexosyltransferase MUCI70 isoform X2"
                     /protein_id="XP_071685868.1"
                     /db_xref="GeneID:139839644"
                     /translation="MDIDVHHFVSLRASRRPDSLNDNFDNKGGDGFFDGGNSSSDYPI
                     KIIGKRGIVRLLLVGGIMWMLLILVVLLFHIWSCQSSLVFLSATCNKDSTIYHVLLTM
                     GLVTPPHRCSIPLARDPEKVVIPDKSSPSQFVQSLSYFEVDDANTNGSDSFPLFGGHQ
                     RWKQRDDSFKLKSSMKVHCGFMRDGGADMSLKDIEYVKKCKFVVASGIFDKYDTPHQP
                     SNVSPRSKKLFCFLMVVDEISLDFIKQNVTVREDNNGGEWVGIWRIILLKHPPYDEPR
                     RNGKVPKILTHRLFPQAIYSIWIDGKMELIVDPLLMLERYLWRGKHTFAIAQHKHHKN
                     IYEEADSNKRRKKYARPLIDRHMKIYRYEGLEPWSPLKQTISDVPEGAIIIREHTALN
                     NLFSCLWFNEVNLFTPRDQLSFGFVVYRLKGQFKFFMFPNCEYNSIFILHPHTREHSS
                     DIEWVKEFKGNNSGLKESRGGLGLWSPYPADLNSVVLPPVARTSKAG"
     misc_feature    621..1511
                     /gene="LOC139839644"
                     /note="Protein of unknown function (DUF616); Region:
                     DUF616; pfam04765"
                     /db_xref="CDD:428112"
ORIGIN      
        1 gctcaggtat caaccggcgt aattttttct accccttgct ttagatattt taatattgat
       61 tcaaacctcg ttaattttac cgtcggttgc attcccgata aaccactgca aacgtcaatt
      121 tcttaccagt tttggatggt tcaatttact ttgatgttaa atataataga gctgtaagta
      181 tggatatcga cgttcaccat ttcgtttcct tacgagcaag ccgtagacct gacagtttaa
      241 atgataactt cgataataaa ggtggagatg gttttttcga tggaggcaat tcatcctcag
      301 attacccaat taaaataatc gggaaaaggg gaattgttcg tttgctacta gtgggtggta
      361 ttatgtggat gctgctcatt ctagttgtac tattgtttca tatatggagt tgccaatctt
      421 cacttgtttt cctctcagct acctgtaata aagacagcac aatatatcat gtgctactca
      481 caatggggct agtaacacct ccgcatcgct gttctattcc cttagccagg gacccggaga
      541 aagtagtgat tccggataaa agttctcctt cacagtttgt gcaaagtcta tcctactttg
      601 aggtggatga tgcaaataca aacggttcag attcttttcc actattcggt gggcatcaaa
      661 gatggaaaca aagagacgat agttttaagc taaaatcgag catgaaggtg cattgtgggt
      721 ttatgcgaga tggtggtgca gatatgtctc tcaaagacat tgaatatgtc aagaaatgta
      781 aatttgtggt tgcttctgga atcttcgata agtatgatac acctcatcaa ccatcaaatg
      841 taagtccacg atcgaagaag ttgttttgtt ttcttatggt ggtggatgaa atatcgttag
      901 attttatcaa acaaaatgtt acggtgcgag aagataataa cgggggagaa tgggtaggaa
      961 tatggcgtat tattctgctt aagcatccac cgtatgacga gcctagacga aacgggaagg
     1021 ttcctaagat attgactcat aggctctttc ctcaagctat ttacagtatt tggatcgatg
     1081 ggaaaatgga actaattgtt gacccgttgc ttatgttgga gagatatctg tggcgtggga
     1141 agcatacatt tgccatagct caacacaagc atcataagaa tatttatgag gaggctgatt
     1201 ctaacaagcg aaggaagaaa tatgctcggc ctttaattga tcgccacatg aaaatttatc
     1261 gctatgaggg attggaacct tggagcccat taaagcaaac tataagtgat gtaccagaag
     1321 gggctataat catacgtgaa catacggcac taaataactt atttagctgt ttgtggttca
     1381 acgaagtaaa tctatttaca ccaagagatc aattgagctt tgggttcgtt gtctacagac
     1441 taaagggcca attcaagttt ttcatgttcc cgaattgtga atataattca atatttatac
     1501 tgcacccaca tactcgtgaa cattcatctg atatcgagtg ggtgaaagag tttaaaggca
     1561 acaacagtgg tttaaaagaa agcagaggag gattagggct ttggtcaccc tatcctgctg
     1621 atcttaattc agttgtactt ccacccgtag caagaacatc caaagctgga tga
//
LOCUS       XM_071829768            2569 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 60 (LOC139839645), transcript variant X1, mRNA.
ACCESSION   XM_071829768
VERSION     XM_071829768.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2569
                     /gene="LOC139839645"
                     /note="probable protein phosphatase 2C 60; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839645"
     CDS             559..1728
                     /gene="LOC139839645"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 46 isoform X1"
                     /protein_id="XP_071685869.1"
                     /db_xref="GeneID:139839645"
                     /translation="MLSGFMNFLWACFRPRSDRHVHNGSDSGGRQDGLLWYKDTGQHF
                     NGDFSMSVVQANNLLEDQSQLESGCLSLQESGPHGTFVGVYDGHGGPETSRFINNNLF
                     QHLKRFTSENQSMSVEVIKKAFQATEDGFLSLVSKQWPMNPQIAAVGSCCLVGVVCNG
                     TLYVANLGDSRAVLGRLVKATGEVLAIQLSAEHNACIESVRQELHSTHPDDSEIVVLK
                     HNVWRVKGLIQISRSIGDVYLKKAEFNRAPLYAKFRLREPFKRPILSSDPSVSAHQLQ
                     PHDQFVIFASDGLWEHLTNQQAVDIVQNHPHTGSAKRLVKVALQEAAKKREMRYSDLK
                     KIDRGVRRHFHDDITASNDSVFSGAHSGGTLVHTVDPIDPSATAIGGGVGTVDLS"
     misc_feature    700..1608
                     /gene="LOC139839645"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; Region: PP2Cc; cd00143"
                     /db_xref="CDD:238083"
     misc_feature    order(724..726,736..741,814..822,1417..1419,1594..1596)
                     /gene="LOC139839645"
                     /note="active site"
                     /db_xref="CDD:238083"
ORIGIN      
        1 ttttgataag tgctctttct tcctttatat ctctctctct tactatataa atctgtatct
       61 atttatatct atgtgtatct atttatatga tactgatatt gatagataca tatctgtaat
      121 ctaaactatt ggtacgctgc tctactgtcc ttaagctatc gattgatttc aattgcgttt
      181 atcactctca taaactcact cacatatcaa tcttcagttt cacgatcgtc atcaaacaac
      241 tgctgtccga tacacgtact tatcaagcta cagttttaat tttgatatgc agatctaatt
      301 gtttcacctt cagatcttct tcacctttct actttaaagg tttgactatt ctcttggtat
      361 tttgaccaat ttattggtta attgtgttaa caacatatct tattgttgat tcaaagagat
      421 taaggcttca tttgttgcat aagattggga acttttactt gggttttaga gactgagggt
      481 tgatttgagg tgcataagtt agtcttgaat cttgatcaaa tgcggataac tcgaaaaggg
      541 gttttcatga gatgaggcat gctatctggg ttcatgaact ttttgtgggc ctgtttccgg
      601 ccacggtccg accgtcatgt tcacaatggt tctgattcgg gtggtcgtca agatggatta
      661 ttatggtata aggatacagg acaacatttt aatggagatt tctcaatgtc ggtagttcaa
      721 gcgaataatt tattagaaga tcagagtcaa cttgaatcag ggtgtttgag tttgcaagaa
      781 tcgggaccgc atggtacgtt tgtaggagta tatgatgggc atggtggtcc tgagacgtca
      841 cggtttatta acaataacct ctttcaacat ctcaagaggt ttacttctga aaatcagtca
      901 atgtcggtag aggtaataaa gaaggctttt caagcaacag aagatggttt cctctctctt
      961 gtttccaaac aatggccaat gaacccacaa atagcagccg ttggatcatg ttgcctcgtt
     1021 ggagttgtat gcaatggaac cctatacgtt gccaatcttg gagattctag agctgttttg
     1081 ggaaggcttg tgaaggcaac tggggaagtt cttgcgattc agctctcagc tgaacacaat
     1141 gcgtgtatag agtctgtaag gcaggagtta cattcaacac atccagatga ctcagaaatt
     1201 gtagttttga agcataacgt gtggcgtgta aaaggcctga tacagatttc gagatcaatt
     1261 ggtgatgttt acttaaaaaa ggccgaattc aatcgggcac ctttatacgc caagttccgc
     1321 cttcgtgaac cctttaaaag accaatattg agctcagatc cgtccgtatc ggcgcaccag
     1381 ttgcagccac atgatcaatt tgttatattt gcttcagatg gcctttggga gcaccttact
     1441 aaccaacaag ctgttgatat tgtccaaaat cacccccaca ctggaagtgc caaaagatta
     1501 gttaaagttg cattgcagga agcagcaaag aagagggaaa tgagatactc cgacttaaaa
     1561 aagattgatc gtggggtccg acgtcatttt cacgatgaca tcacggcttc aaatgattct
     1621 gttttctcgg gggcacattc gggaggtact cttgttcaca cggttgatcc gattgaccct
     1681 tctgctactg ctattggagg tggtgttggt actgttgatc tgtcgtgact tgcaatgcag
     1741 tccgagcacg ctgctcttgg tgatgtcgat tttgttgttg ggaatattga aatttggttt
     1801 tcctctctgg tgattacggg ttcaaaggcg ggtggcaact tcataggggg taattctata
     1861 ggtaaaacaa gtttgggttt agttcggtca ccctcggtta cgttttcgtt agaaaaagtt
     1921 caagcgactc ttgtttctca aggctttccc aaatgagttc gtagtatacg tcttgttgat
     1981 catgttgttg attcagagat tatcgagaag gatggcgtag actgtgtttc agatcgtgtg
     2041 cctgagttaa cggtggtgaa tgatgttcat gatccacaac cagacaacaa tctattgact
     2101 aaagtgggtg tttatcatgt caatttgggt caaagtagag agggcttgaa gataggccgt
     2161 gtggaagatt tgggtcgtgg ctgttctgac gggccggttt ctttttgggc ttaggtgggg
     2221 gaactttatc gggtaaacac actatttttt taggaggtgg ctaaagatct tgatggttgt
     2281 attagggtga aaggcaaacg gcttaattca aaggcacttc caaaacaaaa agagaagagg
     2341 aaacttaaga taaagaaagt tcacggggaa gagttacgaa attttaacgt tgaagacatg
     2401 tgatgattcg tttcgtttcc ctcatttttt tggtatatag gattgttaat tatttctctt
     2461 atttaattga ttgttatttc gttattttgg ttgattctac gtttcgctag tttgagttta
     2521 gggttataga gtttaattta gtctttgtgg gccttgctac ctttatttg
//
LOCUS       XM_071829769            4047 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 60 (LOC139839645), transcript variant X2, mRNA.
ACCESSION   XM_071829769
VERSION     XM_071829769.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4047
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4047
                     /gene="LOC139839645"
                     /note="probable protein phosphatase 2C 60; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839645"
     CDS             559..1611
                     /gene="LOC139839645"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 60 isoform X2"
                     /protein_id="XP_071685870.1"
                     /db_xref="GeneID:139839645"
                     /translation="MLSGFMNFLWACFRPRSDRHVHNGSDSGGRQDGLLWYKDTGQHF
                     NGDFSMSVVQANNLLEDQSQLESGCLSLQESGPHGTFVGVYDGHGGPETSRFINNNLF
                     QHLKRFTSENQSMSVEVIKKAFQATEDGFLSLVSKQWPMNPQIAAVGSCCLVGVVCNG
                     TLYVANLGDSRAVLGRLVKATGEVLAIQLSAEHNACIESVRQELHSTHPDDSEIVVLK
                     HNVWRVKGLIQISRSIGDVYLKKAEFNRAPLYAKFRLREPFKRPILSSDPSVSAHQLQ
                     PHDQFVIFASDGLWEHLTNQQAVDIVQNHPHTGSAKRLVKVALQEAAKKREMRYSDLK
                     KIDRGVRRHFHDDITI"
     misc_feature    700..1608
                     /gene="LOC139839645"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; Region: PP2Cc; cd00143"
                     /db_xref="CDD:238083"
     misc_feature    order(724..726,736..741,814..822,1417..1419,1594..1596)
                     /gene="LOC139839645"
                     /note="active site"
                     /db_xref="CDD:238083"
ORIGIN      
        1 ttttgataag tgctctttct tcctttatat ctctctctct tactatataa atctgtatct
       61 atttatatct atgtgtatct atttatatga tactgatatt gatagataca tatctgtaat
      121 ctaaactatt ggtacgctgc tctactgtcc ttaagctatc gattgatttc aattgcgttt
      181 atcactctca taaactcact cacatatcaa tcttcagttt cacgatcgtc atcaaacaac
      241 tgctgtccga tacacgtact tatcaagcta cagttttaat tttgatatgc agatctaatt
      301 gtttcacctt cagatcttct tcacctttct actttaaagg tttgactatt ctcttggtat
      361 tttgaccaat ttattggtta attgtgttaa caacatatct tattgttgat tcaaagagat
      421 taaggcttca tttgttgcat aagattggga acttttactt gggttttaga gactgagggt
      481 tgatttgagg tgcataagtt agtcttgaat cttgatcaaa tgcggataac tcgaaaaggg
      541 gttttcatga gatgaggcat gctatctggg ttcatgaact ttttgtgggc ctgtttccgg
      601 ccacggtccg accgtcatgt tcacaatggt tctgattcgg gtggtcgtca agatggatta
      661 ttatggtata aggatacagg acaacatttt aatggagatt tctcaatgtc ggtagttcaa
      721 gcgaataatt tattagaaga tcagagtcaa cttgaatcag ggtgtttgag tttgcaagaa
      781 tcgggaccgc atggtacgtt tgtaggagta tatgatgggc atggtggtcc tgagacgtca
      841 cggtttatta acaataacct ctttcaacat ctcaagaggt ttacttctga aaatcagtca
      901 atgtcggtag aggtaataaa gaaggctttt caagcaacag aagatggttt cctctctctt
      961 gtttccaaac aatggccaat gaacccacaa atagcagccg ttggatcatg ttgcctcgtt
     1021 ggagttgtat gcaatggaac cctatacgtt gccaatcttg gagattctag agctgttttg
     1081 ggaaggcttg tgaaggcaac tggggaagtt cttgcgattc agctctcagc tgaacacaat
     1141 gcgtgtatag agtctgtaag gcaggagtta cattcaacac atccagatga ctcagaaatt
     1201 gtagttttga agcataacgt gtggcgtgta aaaggcctga tacagatttc gagatcaatt
     1261 ggtgatgttt acttaaaaaa ggccgaattc aatcgggcac ctttatacgc caagttccgc
     1321 cttcgtgaac cctttaaaag accaatattg agctcagatc cgtccgtatc ggcgcaccag
     1381 ttgcagccac atgatcaatt tgttatattt gcttcagatg gcctttggga gcaccttact
     1441 aaccaacaag ctgttgatat tgtccaaaat cacccccaca ctggaagtgc caaaagatta
     1501 gttaaagttg cattgcagga agcagcaaag aagagggaaa tgagatactc cgacttaaaa
     1561 aagattgatc gtggggtccg acgtcatttt cacgatgaca tcacgattta ataatgcgga
     1621 atgaaggatc gatggctaaa ataaagaatg gatagatagt tcaaccttct cggtttgaac
     1681 ctggatgtgc taaccttcac ggtttagcag aaacaacctt ctcggttgat agacaaaaaa
     1741 aacccacaag gctttctttt atttcacgta gacaatatca atcaaaaact gagttttgca
     1801 aagctaatac atggatataa atactaaata aaataatacg gaatagataa ataaatatgg
     1861 agtagataaa catgaaaata aaaatttaaa atatcaaaat ccttattgaa tttagctctt
     1921 gaattttaac tccgatctag ctgacttctt ctcttgtttc cttagccaac acgtctacta
     1981 tcctatccct acttgatcct catgtggccc aataaaatta ttttgcaacc cactaacttg
     2041 attcatttgt tcggacccaa atttacccaa tctttcagtc aaataattcc gaggccccat
     2101 ccatgcaaac ccaaaattgt tgcccgattc tgcatcatca tccccttctt cgaaaagact
     2161 cgtcctcgag tctacaacat caatggatga aacatccatc cgatcctcaa gaattacaca
     2221 aatgttttgt aactcgtttc tcaaattaac atcaacatct tcaaaattca gaaaatttgc
     2281 atgattgtca attgccatct cgctacgaaa atatggccca accaagacac ccatgttttc
     2341 tgtcttcact tccacgtcct tttcactatc tatatcatag ataggctctt catcctcacc
     2401 atccgtatca tagatgggtt cggaatcttc atctacaata ggttccggaa cgtattccag
     2461 attaaaaagt tgttcaacct tcataccatt ggtctggaag ggatcatcat gaaggtcttg
     2521 tttgaatccg ctcggcgcat cggcgaatgg attcatactt tcccaccggt tctctgtttg
     2581 atacgaagca tagcgttcat catatttatg atgtcggccc cgttctaatt ttactattct
     2641 tcgtcgcaaa cgctcgattt cagcatctgt tggatcagta taactgcctc gttcggcgta
     2701 tctgctatag tcacctcggt agatgatgtt agccatgcct ggaatctgat accacataat
     2761 gcggaatgaa ggatcgatgg ctaaaataaa gaatggatag atagttcaac cttctcggtt
     2821 tgaacctaga tgtgctaacc ttcacggttt agcagaaaca acaaccttct cggttgatag
     2881 acaaaaaaaa cccacaaggc tttcttttat ttcacgtaga caatatcaat caaaaactga
     2941 gttttgcaaa gctaatacat ggatataaat actaaataaa ataatacgga atagataaat
     3001 aaatatggag tagataaaca tgaaaataaa aatttaaaat atcaaaatcc ttattgaatt
     3061 tagctcttga attttaactc cgatctagcc gacttcttct cttgtttcct tagccaacac
     3121 gtctactatc ctatccctac ttgatcctca tgtggcccaa taaaattatt ttgcaaccca
     3181 ctaacttgat tcatttgttc ggacccaaat ttacccaatc tttcagtcaa ataattccga
     3241 ggccccatcc atgcaaaccc aaaattgttg cccgattctg catcatttaa ctttttgttt
     3301 aatagagtaa gtttacattt ttctggtttt acctagtggt tgaaaatgag tagtaatgtg
     3361 cggagtaata taaaaaaggt aaaacttccg tttagaagca cacctaaagt tgcatcaatt
     3421 gtaactctta agcacacttt aaataattac atactcctga ttattgttta attaattaat
     3481 tagtccatcc ataataataa aatattttct aaaagaattt aaaatataaa tgtaacgaca
     3541 aaatataaca tgagtttcaa tgagtttgag acttttcaca taacttggtt agactgtcgg
     3601 tcaaacataa tctctccacc caacatatat cttgcctttt tcttttggtt ttcttactca
     3661 aattaacaat tattcttaaa tcataacgta ctgcatgtaa tagaattgta actcgatata
     3721 aatcgcgctc attaaaacgg ttttcatagt tttcataatg ttgctcctcc aattagttgt
     3781 gttttggtgt atttccttct gtgtttgaag gttttgcagt ggtgtatttc ataatgttgc
     3841 tcctccaact atgtgtttct ttgaactttt attttttcat aggcattctt ttccaacttt
     3901 aattttacgt ttttatatat gatatgatat gatagttgat gaaaggtatt cttgaacaac
     3961 tttaatttta cgttttttta tatatgatat gatatttgac gaagggtata tgaatagatt
     4021 tgaattttac atatgttttc attagta
//
LOCUS       XM_071829770            1045 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aquaporin PIP1-3-like
            (LOC139839646), transcript variant X1, mRNA.
ACCESSION   XM_071829770
VERSION     XM_071829770.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1045
                     /gene="LOC139839646"
                     /note="aquaporin PIP1-3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 131
                     Proteins"
                     /db_xref="GeneID:139839646"
     CDS             26..889
                     /gene="LOC139839646"
                     /codon_start=1
                     /product="aquaporin PIP1-3-like isoform X1"
                     /protein_id="XP_071685871.1"
                     /db_xref="GeneID:139839646"
                     /translation="MEGKEEDVKLGANKYSERQPIGTSAQTDKDYNEPPPAPLFEPGE
                     LSSWSFYRAGIAEFIATFLFLYITVLTVMGVAKSPTKCGTVGIQGIAWAFGGMIFALV
                     YCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVIKGFEGKNTFT
                     GVGGGANVVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGF
                     AVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAAIYHTV
                     VIRAIPFKSRS"
     misc_feature    155..847
                     /gene="LOC139839646"
                     /note="Major intrinsic protein; Region: MIP; pfam00230"
                     /db_xref="CDD:395174"
     misc_feature    order(305..307,359..367,719..724,731..733,740..742)
                     /gene="LOC139839646"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     misc_feature    order(365..373,731..739)
                     /gene="LOC139839646"
                     /note="Asn-Pro-Ala signature motifs; other site"
                     /db_xref="CDD:238204"
     polyA_site      1045
                     /gene="LOC139839646"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtacagcct agtgagcaaa caacaatgga aggtaaggaa gaagatgtta agttaggagc
       61 aaacaaatac tcagaaagac aaccaattgg tacatcagct caaactgata aagattacaa
      121 tgaaccacca ccagcacctt tgtttgagcc tggagagttg tcttcatggt ctttttacag
      181 agctggtatt gctgaattca tagcaacttt cttgttcctg tacataactg ttttaactgt
      241 tatgggtgtt gccaaatctc ctaccaaatg tggtactgtt ggtattcaag gtattgcttg
      301 ggcttttggt ggtatgatct ttgcccttgt ctactgtact gctggtatct caggaggaca
      361 cattaaccct gctgtaacct ttggtctgtt gctggcaaga aagttatctt tgaccagggc
      421 agtgttctac atggttatgc agtgtcttgg tgccatctgt ggtgcaggtg tgatcaaggg
      481 ttttgagggc aaaaacacct tcactggtgt gggtggtgga gccaatgttg tagcccatgg
      541 ttacaccaag ggtagtggtc ttggtgctga gattattggt acttttgtcc ttgtttacac
      601 tgtgttttca gccactgatg ccaagagaag tgccagagac tcgcatgttc caattttggc
      661 ccctctccca attgggtttg cagtgttctt ggttcactta gccaccatcc ccatcaccgg
      721 aactggtatt aaccctgcaa ggagtcttgg agctgcaatc atctacaaca aggaccatgc
      781 atgggacgac cactggatct tctgggttgg tcctttcatt ggagctgcac ttgctgctat
      841 ataccataca gttgtcatca gggccattcc cttcaagagc agatcttaga atatataaaa
      901 agttatgtga attgtgtgtg taaattatgg tcttaaaatg gatgttattg tattcaagtt
      961 tgtttcatgc ttttttttaa tcaactcttc ttatggaacg gagctatgat tgtttgagaa
     1021 ttgcttctag tgtactactc actct
//
LOCUS       XM_071829771            1049 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aquaporin PIP1-3-like
            (LOC139839646), transcript variant X2, mRNA.
ACCESSION   XM_071829771
VERSION     XM_071829771.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1049
                     /gene="LOC139839646"
                     /note="aquaporin PIP1-3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839646"
     CDS             26..940
                     /gene="LOC139839646"
                     /codon_start=1
                     /product="aquaporin PIP1-2-like isoform X2"
                     /protein_id="XP_071685872.1"
                     /db_xref="GeneID:139839646"
                     /translation="MEGKEEDVKLGANKYSERQPIGTSAQTDKDYNEPPPAPLFEPGE
                     LSSWSFYRAGIAEFIATFLFLYITVLTVMGVAKSPTKCGTVGIQGIAWAFGGMIFALV
                     YCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVIKGFEGKNTFT
                     GVGGGANVVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGF
                     AVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHVMDLLGWSFHWSCTCCYIPY
                     SCHQGHSLQEQILEYIKSYVNCVCKLWS"
     misc_feature    155..811
                     /gene="LOC139839646"
                     /note="Major intrinsic protein; Region: MIP; pfam00230"
                     /db_xref="CDD:395174"
     misc_feature    order(305..307,359..367,719..724,731..733,740..742)
                     /gene="LOC139839646"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     misc_feature    order(365..373,731..739)
                     /gene="LOC139839646"
                     /note="Asn-Pro-Ala signature motifs; other site"
                     /db_xref="CDD:238204"
     polyA_site      1049
                     /gene="LOC139839646"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtacagcct agtgagcaaa caacaatgga aggtaaggaa gaagatgtta agttaggagc
       61 aaacaaatac tcagaaagac aaccaattgg tacatcagct caaactgata aagattacaa
      121 tgaaccacca ccagcacctt tgtttgagcc tggagagttg tcttcatggt ctttttacag
      181 agctggtatt gctgaattca tagcaacttt cttgttcctg tacataactg ttttaactgt
      241 tatgggtgtt gccaaatctc ctaccaaatg tggtactgtt ggtattcaag gtattgcttg
      301 ggcttttggt ggtatgatct ttgcccttgt ctactgtact gctggtatct caggaggaca
      361 cattaaccct gctgtaacct ttggtctgtt gctggcaaga aagttatctt tgaccagggc
      421 agtgttctac atggttatgc agtgtcttgg tgccatctgt ggtgcaggtg tgatcaaggg
      481 ttttgagggc aaaaacacct tcactggtgt gggtggtgga gccaatgttg tagcccatgg
      541 ttacaccaag ggtagtggtc ttggtgctga gattattggt acttttgtcc ttgtttacac
      601 tgtgttttca gccactgatg ccaagagaag tgccagagac tcgcatgttc caattttggc
      661 ccctctccca attgggtttg cagtgttctt ggttcactta gccaccatcc ccatcaccgg
      721 aactggtatt aaccctgcaa ggagtcttgg agctgcaatc atctacaaca aggaccatgc
      781 atgggacgac cacgtaatgg atcttctggg ttggtccttt cattggagct gcacttgctg
      841 ctatatacca tacagttgtc atcagggcca ttcccttcaa gagcagatct tagaatatat
      901 aaaaagttat gtgaattgtg tgtgtaaatt atggtcttaa aatggatgtt attgtattca
      961 agtttgtttc atgctttttt ttaatcaact cttcttatgg aacggagcta tgattgtttg
     1021 agaattgctt ctagtgtact actcactct
//
LOCUS       XM_071829772            2097 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase BSK7-like (LOC139839647), transcript variant X1, mRNA.
ACCESSION   XM_071829772
VERSION     XM_071829772.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2097
                     /gene="LOC139839647"
                     /note="serine/threonine-protein kinase BSK7-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 69 Proteins"
                     /db_xref="GeneID:139839647"
     CDS             322..1779
                     /gene="LOC139839647"
                     /codon_start=1
                     /product="serine/threonine-protein kinase BSK7-like"
                     /protein_id="XP_071685873.1"
                     /db_xref="GeneID:139839647"
                     /translation="MGCEFSRLCSCCDTVQDGAIAQAGNVDNEPGEASDLPVFREFSV
                     DQLRTATSGFAVENIVSEHGEKAPNVVYKGKLANQRRIAVKRFNRSAWPDSRQFLEEA
                     RAVGQLRNPRLANLLGCCCEGDERLLVAEFMPHDTLAKHLFHWETQPMQWAMRLRVAL
                     YLAEALEYCTNKGRALYHDLNAYRIVFDEDANPRLSCFGLMKNSRDGKSYSTNLAFTP
                     PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFS
                     NDDGTELVRLASRCLQYEPRERPNPKSLVSALIPVQKETEVPSHVLMGMPQGGSTMPL
                     TPLGEACLRMDLTFIHGLLEKLGYKDDEGAATELSFGMWTNQIHDTLNSKKKGDSAFR
                     HKEFKAAIDFYTQFIEVGTMVSPTVFARRSLSHLMSDLPQEALNDAVQAQVISPIWHI
                     ASYLQAAALFALGRENEAQIALREGSVLEEKYNTA"
     misc_feature    532..1251
                     /gene="LOC139839647"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1471..1476,1483..1488,1492..1494,1567..1569,
                     1576..1581,1588..1593,1597..1602,1669..1671,1678..1683,
                     1690..1695,1702..1704)
                     /gene="LOC139839647"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1471..1545
                     /gene="LOC139839647"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1474..>1758
                     /gene="LOC139839647"
                     /note="SGT1, suppressor of G2 allele of SKP1; Provisional;
                     Region: PLN03088"
                     /db_xref="CDD:215568"
     misc_feature    1561..1653
                     /gene="LOC139839647"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1666..1743
                     /gene="LOC139839647"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
ORIGIN      
        1 ttcttttctt gatctctgat tcattcattt cattcaagag agagaaagaa agattaaatc
       61 ttgaagagag accattttac tctttaattc tttttgaccc aagtgggtct atccatgaat
      121 ctgctggtgt tcttgtaatt tcaagcaaaa ggtactttga tgttaaatta tgtcgaaaca
      181 cggagttttg agtgactgag aagctcgata aattacttgt gaagctttat catatttata
      241 tttatatatt tatatatatt caaaaatatt caattcaaag atttcaagta gaattcaaca
      301 accggcagct actttgaaat catgggctgt gagttttcta ggctgtgctc gtgttgcgat
      361 actgtacaag atggagcgat agctcaagct ggtaatgttg ataatgagcc gggtgaggca
      421 agtgatttac ccgtatttcg cgaattttcg gttgaccaac tcaggactgc tacatctggt
      481 tttgcggttg aaaatatcgt ctctgaacac ggcgaaaaag cgcctaatgt tgtgtacaaa
      541 gggaaattgg ctaaccagag acgcattgct gtcaaacgat tcaatagatc tgcctggcct
      601 gattcgaggc agtttctgga agaagcaaga gcggttggtc agcttcgaaa cccgagatta
      661 gccaatctgc ttggttgttg ctgtgaaggt gatgaaagat tacttgttgc tgagtttatg
      721 ccacatgata cccttgctaa acacctattt cattgggaaa cacaacctat gcaatgggca
      781 atgcggttac gggtggcttt atatctcgca gaagctctag aatattgtac gaacaaagga
      841 cgtgctcttt atcatgacct taacgcctat agaatagtct ttgacgaaga tgcaaatcca
      901 agactttctt gctttgggtt gatgaagaac agtagggacg gaaaaagtta cagtacaaac
      961 ttagctttca cccctcccga atatctgagg actgggaggg ttacaccaga aagtgttatg
     1021 tacagtttcg gcaccctttt actcgacctt ctaagtggga agcatattcc acctagccat
     1081 gcccttgatt tgataagaga ccggaatctt caaatgctga ctgactcttg cttggaaggt
     1141 caattctcta atgatgatgg aaccgaatta gtacgcttag cctcaaggtg tttgcaatat
     1201 gagccccgtg agcggccaaa cccaaagtca ttggtttctg ctttgattcc tgtacaaaag
     1261 gaaaccgagg tgccatctca cgtgttaatg ggtatgccac aaggtgggtc cactatgcct
     1321 ttaacgccac ttggagaagc ctgcttaaga atggatttaa cgttcataca tggacttctc
     1381 gagaagttgg gttacaaaga tgatgagggt gctgcaactg agctttcttt tggtatgtgg
     1441 actaatcaga tacacgacac attgaactca aagaagaaag gggactcggc ttttcgccat
     1501 aaagagttca aagctgcaat agacttttat acacagttca ttgaagtcgg aacaatggtc
     1561 tcgccaacag tctttgcacg ccgaagcttg tcacatttaa tgagtgatct gccacaagaa
     1621 gcacttaacg atgctgtaca agcacaagtg atatcaccta tttggcatat cgcatcttat
     1681 ttacaagctg ctgctttatt tgcgttgggg agggaaaacg aagcacaaat cgcactcaga
     1741 gaaggttcgg ttcttgaaga aaaatataat accgcttgat tgtatttgag actggtatat
     1801 tcgcccttga cgatatacag aaaataggcc aaatgggggt tcggtatgaa aaccgaaact
     1861 tgatgatatg caagcagaaa attacagttt gggcagaaaa gggttttgat ttgtttgttt
     1921 aatgaagcat tctttgcaat acttttttgg taatattggt tggttgattt gtcttgagtt
     1981 ttacttaggg gtggtgtaat gacatgttta cccttgtttc agaagggatg tatgcccttt
     2041 tttttcttct tgttaataca aaaatctttg gtggattgga acggattatt tatttca
//
LOCUS       XM_071829773            1962 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase BSK7-like (LOC139839647), transcript variant X2, mRNA.
ACCESSION   XM_071829773
VERSION     XM_071829773.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1962
                     /gene="LOC139839647"
                     /note="serine/threonine-protein kinase BSK7-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 69 Proteins"
                     /db_xref="GeneID:139839647"
     CDS             187..1644
                     /gene="LOC139839647"
                     /codon_start=1
                     /product="serine/threonine-protein kinase BSK7-like"
                     /protein_id="XP_071685874.1"
                     /db_xref="GeneID:139839647"
                     /translation="MGCEFSRLCSCCDTVQDGAIAQAGNVDNEPGEASDLPVFREFSV
                     DQLRTATSGFAVENIVSEHGEKAPNVVYKGKLANQRRIAVKRFNRSAWPDSRQFLEEA
                     RAVGQLRNPRLANLLGCCCEGDERLLVAEFMPHDTLAKHLFHWETQPMQWAMRLRVAL
                     YLAEALEYCTNKGRALYHDLNAYRIVFDEDANPRLSCFGLMKNSRDGKSYSTNLAFTP
                     PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFS
                     NDDGTELVRLASRCLQYEPRERPNPKSLVSALIPVQKETEVPSHVLMGMPQGGSTMPL
                     TPLGEACLRMDLTFIHGLLEKLGYKDDEGAATELSFGMWTNQIHDTLNSKKKGDSAFR
                     HKEFKAAIDFYTQFIEVGTMVSPTVFARRSLSHLMSDLPQEALNDAVQAQVISPIWHI
                     ASYLQAAALFALGRENEAQIALREGSVLEEKYNTA"
     misc_feature    397..1116
                     /gene="LOC139839647"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1336..1341,1348..1353,1357..1359,1432..1434,
                     1441..1446,1453..1458,1462..1467,1534..1536,1543..1548,
                     1555..1560,1567..1569)
                     /gene="LOC139839647"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1336..1410
                     /gene="LOC139839647"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1339..>1623
                     /gene="LOC139839647"
                     /note="SGT1, suppressor of G2 allele of SKP1; Provisional;
                     Region: PLN03088"
                     /db_xref="CDD:215568"
     misc_feature    1426..1518
                     /gene="LOC139839647"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1531..1608
                     /gene="LOC139839647"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
ORIGIN      
        1 tcttgatctc tgattcattc atttcattca agagagagaa agaaagatta aatcttgaag
       61 agagaccatt ttactcttta attctttttg acccaagtgg gtctatccat gaatctgctg
      121 gtgttcttgt aatttcaagc aaaagatttc aagtagaatt caacaaccgg cagctacttt
      181 gaaatcatgg gctgtgagtt ttctaggctg tgctcgtgtt gcgatactgt acaagatgga
      241 gcgatagctc aagctggtaa tgttgataat gagccgggtg aggcaagtga tttacccgta
      301 tttcgcgaat tttcggttga ccaactcagg actgctacat ctggttttgc ggttgaaaat
      361 atcgtctctg aacacggcga aaaagcgcct aatgttgtgt acaaagggaa attggctaac
      421 cagagacgca ttgctgtcaa acgattcaat agatctgcct ggcctgattc gaggcagttt
      481 ctggaagaag caagagcggt tggtcagctt cgaaacccga gattagccaa tctgcttggt
      541 tgttgctgtg aaggtgatga aagattactt gttgctgagt ttatgccaca tgataccctt
      601 gctaaacacc tatttcattg ggaaacacaa cctatgcaat gggcaatgcg gttacgggtg
      661 gctttatatc tcgcagaagc tctagaatat tgtacgaaca aaggacgtgc tctttatcat
      721 gaccttaacg cctatagaat agtctttgac gaagatgcaa atccaagact ttcttgcttt
      781 gggttgatga agaacagtag ggacggaaaa agttacagta caaacttagc tttcacccct
      841 cccgaatatc tgaggactgg gagggttaca ccagaaagtg ttatgtacag tttcggcacc
      901 cttttactcg accttctaag tgggaagcat attccaccta gccatgccct tgatttgata
      961 agagaccgga atcttcaaat gctgactgac tcttgcttgg aaggtcaatt ctctaatgat
     1021 gatggaaccg aattagtacg cttagcctca aggtgtttgc aatatgagcc ccgtgagcgg
     1081 ccaaacccaa agtcattggt ttctgctttg attcctgtac aaaaggaaac cgaggtgcca
     1141 tctcacgtgt taatgggtat gccacaaggt gggtccacta tgcctttaac gccacttgga
     1201 gaagcctgct taagaatgga tttaacgttc atacatggac ttctcgagaa gttgggttac
     1261 aaagatgatg agggtgctgc aactgagctt tcttttggta tgtggactaa tcagatacac
     1321 gacacattga actcaaagaa gaaaggggac tcggcttttc gccataaaga gttcaaagct
     1381 gcaatagact tttatacaca gttcattgaa gtcggaacaa tggtctcgcc aacagtcttt
     1441 gcacgccgaa gcttgtcaca tttaatgagt gatctgccac aagaagcact taacgatgct
     1501 gtacaagcac aagtgatatc acctatttgg catatcgcat cttatttaca agctgctgct
     1561 ttatttgcgt tggggaggga aaacgaagca caaatcgcac tcagagaagg ttcggttctt
     1621 gaagaaaaat ataataccgc ttgattgtat ttgagactgg tatattcgcc cttgacgata
     1681 tacagaaaat aggccaaatg ggggttcggt atgaaaaccg aaacttgatg atatgcaagc
     1741 agaaaattac agtttgggca gaaaagggtt ttgatttgtt tgtttaatga agcattcttt
     1801 gcaatacttt tttggtaata ttggttggtt gatttgtctt gagttttact taggggtggt
     1861 gtaatgacat gtttaccctt gtttcagaag ggatgtatgc cctttttttt cttcttgtta
     1921 atacaaaaat ctttggtgga ttggaacgga ttatttattt ca
//
LOCUS       XM_071829774            1627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-hook motif
            nuclear-localized protein 5-like (LOC139839648), mRNA.
ACCESSION   XM_071829774
VERSION     XM_071829774.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1627
                     /gene="LOC139839648"
                     /note="AT-hook motif nuclear-localized protein 5-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139839648"
     CDS             452..1426
                     /gene="LOC139839648"
                     /codon_start=1
                     /product="AT-hook motif nuclear-localized protein 5-like"
                     /protein_id="XP_071685875.1"
                     /db_xref="GeneID:139839648"
                     /translation="MDGREGIPSFYLNKGFHGSGSNTGSGNPGGGFSALPPGFKTQMN
                     PNLSSHSHTNVRAVSSMGPPFQLEHSPSPAGFPHGFNMDGGGSGGGSDDRGGGVVSIP
                     TPGSGNESVVKKRRGRPRKYAPEGSHMALGLKPASSVASPDPNTPTPEKKRGRPPGSG
                     RKQQLANVGEWMHNSAGSAVTPHIIHISIGEDVAEKILSFAQQRQRALCILSGNGSVS
                     AVTLRQFSSSGGTVTYEGRFEILCISGSYLLAESGSPRNRTGSLSVSVCSSDGQVIGG
                     AIGGKLIASTLIQVVVLSFLYGGGGDYYKPKEIELPSGDEKSPGVQLN"
     misc_feature    992..1336
                     /gene="LOC139839648"
                     /note="Domain of unknown function found in archaea,
                     bacteria, and plants; Region: DUF296; cd11378"
                     /db_xref="CDD:211390"
     misc_feature    order(995..997,1001..1003,1007..1009,1016..1018,
                     1091..1096,1145..1147,1166..1177,1181..1183,1187..1189,
                     1232..1234,1238..1240,1244..1246,1253..1255,1262..1264,
                     1268..1276,1316..1318,1322..1324,1328..1330,1334..1336)
                     /gene="LOC139839648"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:211390"
ORIGIN      
        1 atatggagta attcaaaacg cttcaatccc gttttacttt tgtcttttac ctttcccttc
       61 ctatttctct ttcccataac tcctccttat atcaatttca tctacaactt caatttcaaa
      121 tttagggttt ttcaattcac ttgcaaaatc gcccaaaaaa actcccgttt caccgtcgta
      181 cacaggtgtt tgagattaca aagcttgaat ctttcttcaa aaaggttcag tcttttgcta
      241 gtttatgtaa ccttttagcg ttaaattggt tctccaaact gttcagaaga acccatgtta
      301 aacccttgac aaattcccaa ttttgcgttg tgggttttgc tcaattgtgc tttttaggtt
      361 agaattttgg taattgtagt agttagaggt gggttgaggt tagttatttg gtaagttttg
      421 tgggttgggt ggaagattag tgagtaaatg catggatgga agggaaggaa ttccatcctt
      481 ttatctcaat aaagggtttc atgggtcagg gtcgaataca gggtcgggta atccaggtgg
      541 tggtttcagt gccctgccac ctggtttcaa gactcaaatg aaccctaatt tatcttcaca
      601 tagccatact aatgtgaggg cagtttcatc aatgggccca ccatttcaat tggaacacag
      661 cccatcacct gctggtttcc ctcatggatt taatatggat ggcggtggta gtggcggtgg
      721 gagtgatgat cgcggtggcg gtgtggtgtc tattcccacc cctggaagtg gtaatgagag
      781 tgttgtaaag aaaagaagag ggagacctag aaaatatgct cctgaggggt ctcacatggc
      841 gttgggacta aaacctgcat catcggttgc atcgcctgat ccaaatactc cgactccgga
      901 aaaaaagaga gggaggcctc ctggtagtgg acggaagcaa cagcttgcta atgttggtga
      961 atggatgcat aattcagcag gatcggctgt cacacctcat ataatccata tttctattgg
     1021 agaggatgtt gcagaaaaga tattatcttt tgcgcaacag aggcaaaggg ctttgtgcat
     1081 cttgtcaggc aatggtagtg tttctgctgt gacgttacgt caattttcgt cttctggtgg
     1141 taccgtgact tatgagggtc gttttgagat actctgcata tcgggttctt atctgcttgc
     1201 tgaaagtgga agcccccgca accgaactgg cagtcttagt gtgtctgtat gtagttctga
     1261 tggtcaagtt ataggtggtg ccattggcgg taaacttatc gcctccaccc taatacaggt
     1321 ggtggtttta agtttcttgt atggtggtgg tggagattat tataagccaa aggaaattga
     1381 gctaccttcg ggagacgaaa agagtcctgg agttcaatta aactagacat tgcattgtgt
     1441 agattatcgg tgggctatgt gttaatgtat ctgtaacaac tgaagtcggc atctttatgt
     1501 ttgtttagct gtagaaactt atcttttgat tttgcccatt tgtagctagt atcatttgat
     1561 gagttgggat cagaaaaggt tatcttcttt gaggatggat taatgttcat ttctggtatt
     1621 tgtttat
//
LOCUS       XM_071829775            6234 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            UPL3-like (LOC139839649), mRNA.
ACCESSION   XM_071829775
VERSION     XM_071829775.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6234
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6234
                     /gene="LOC139839649"
                     /note="E3 ubiquitin-protein ligase UPL3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139839649"
     CDS             266..5782
                     /gene="LOC139839649"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase UPL3-like"
                     /protein_id="XP_071685876.1"
                     /db_xref="GeneID:139839649"
                     /translation="METRRRKRAEVTSSAQSSSSSGGPNKRTRLSSSPNVAGSSVFTR
                     SRSATTNLMDNTNSVNESSGSGSGRGRRSRKNTSTNTNSQNPNIGSDNSDKGKEKEHE
                     VRVRDRGGNLGVSIDGGEHDHDHDDEDDDSEGGGVGILHQNLTSASSALQGLLRKLGA
                     GLDDLLPSSAMAAASSSHQSGRLKKMLSSLRADGEEGKQVEALTQLCDMLSIGTEDSL
                     STFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFVAR
                     LLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAAN
                     MCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFAASSDQLDELCV
                     HGLVKQAATLISTSSSGGGQASLSTSTYTGLIRLLSTCASGSPLGSKTLLHLGISGIL
                     KDILSGSGLVATMSVSPALSRPPEQIFEIVNLANELLPPLSNGTITLPTTSNVFVKGS
                     LIKKTSAGTSIKQEDLSDGAPEVSAREKLLTDQPELLQQFGMDLLPVLIQVYGSSVNA
                     PVRHKCLSVIGKLMYFSRADMIQSLLGVANISSFLAGVLAWKDPQVLVPSLQIAEILM
                     EKLPETFSKMFVREGVVHAIDTLAGLSSGDVISSPLSNEKVNDSIPGSSSRSRRYRHR
                     IGNSNTDVNVNAAEDLKNSGSLGNNQELPGVSSSIRLAVSTSAKAFKDKYFPSEPGST
                     EVGVTDDLLHLKNLCKKLGSAVDDQKMKSKGKSKAFGPKFTDFSPVKEDNLLGVITEL
                     LNELTKDDGVSTFEFIGSGVVSALLNYFSCGYFSKEKVSETDLSKLRQLAIKRYTSFI
                     EIALPLSVNEGKHAPMSVLVQKLQFALTSLERFPVVLSQNARSSTGNVRLSSGLGALS
                     QPFKLRLCRAHGEKALRDYSTNIVLIDPLASLAAVEDFLWPRVQRTESSQHPSGTTPV
                     GAGASSPLTPAGATRRQSMRSKSAISIGDSAKKETPQEKNASSSKGKGKAVLKPGQDD
                     GRGAPQTRNAAKRRASLDKDAQMKSVDGESTSEDDDFDISRVEIDDTLVIEDEEIAEE
                     DDEDQDDVLGDDSHAVCTPDKVHDVKLGDSAEERPVDSQTNPASGSSSRGTANRGSDS
                     LGSRGTMSFAAAAMAGLASANGRGIRAGSRDRHGRPLDTPRLVFSSGGKQLNRHLTIY
                     QAIQRQLVNDEDDDEKYNGTDFASSDGSRLWGDIYTITYQRADTQTVSTTPSKSVTKA
                     GSTSNSNNDSRTHQMSLLDSILQGELPCDLEKNNPTYNILSLLRVLEGLNQLAPRLRV
                     QSATDSFAEGKISSLDDLNVTGVRVSSDEFINSKLTPKLSRQIQDALALCSGSLPSWC
                     YQLTKACPFLFPFEIRRQYFYSTAFGLSRALHRLQQQQGADGHGSTNEREFRVGRLQR
                     QKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKEG
                     LKMWRSNCLDEKTAGKGGGDLILAPLGLFPCPWPITSEDGSFSKVTEHFRLLGRVMAK
                     ALQDGRLLDLPLSAPFYKLVVGQELDLHDISLFDAEFGKTLQELQALVSRKQYLESIQ
                     NQNEILNLRFRGAPVEDLCLDFTLPGYPDYILKTGDDNVDLDNLEEYISLVVDASVKT
                     GITRQMEAFRAGFNQVFDISSLQIFSPSELDYLLCGRGELWEADTLVEHIKFDHGYTS
                     KSPAIVNVLEILGEFNPEQQRSFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTANNT
                     ASNAAGVSESADDDLPSVMTCANYLKLPPYSTKEIMFKKLVYAISEGQGSFDLS"
     misc_feature    812..>1630
                     /gene="LOC139839649"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; Region: SRP1; COG5064"
                     /db_xref="CDD:227396"
     misc_feature    order(1007..1009,1019..1021,1124..1126,1136..1138,
                     1148..1150,1241..1243,1253..1255,1265..1267)
                     /gene="LOC139839649"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293788"
     misc_feature    1046..1159
                     /gene="LOC139839649"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    1172..1270
                     /gene="LOC139839649"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    1310..1390
                     /gene="LOC139839649"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    4574..5764
                     /gene="LOC139839649"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; Region: HECTc;
                     cd00078"
                     /db_xref="CDD:238033"
     misc_feature    order(4592..4594,4676..4678,4706..4708,4946..4948,
                     5519..5521,5660..5665,5672..5686,5744..5746)
                     /gene="LOC139839649"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     misc_feature    order(5030..5032,5039..5044,5048..5053,5090..5092,
                     5111..5113,5117..5119,5147..5152,5156..5158,5174..5176,
                     5189..5191,5234..5236,5246..5248)
                     /gene="LOC139839649"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     polyA_site      6234
                     /gene="LOC139839649"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caacaattag ggttttttct aacccttgtt ttctcgaatt aaactctctc aatcgtgata
       61 ttcctcgtca cacactcaca aattcaccga tcgattccaa tttaattaaa ttactcacat
      121 tcatcgttaa ttcattgcat ttggcatcaa ttcaagtttc ttcgttcgtt taattaacag
      181 aatttacaga aatgataaaa attaattgtt tcatcgatcg tcgttgatcg ttggatgtca
      241 tcaaaaaggg gtttttaggt tttgtatgga aactcgtaga cggaaaaggg cggaggttac
      301 ctcatcggcc caatcttcat cgtcttccgg cggtcccaac aaacgcactc gtttatcttc
      361 ttctccaaac gtcgcaggtt catctgtttt tactcgttca cgctctgcta ctactaattt
      421 aatggataat actaattcgg tcaatgaatc atccgggtcc gggtcgggtc gcggtcgccg
      481 gagcaggaag aatactagta ccaatactaa tagtcagaat ccgaatattg gatccgataa
      541 ctcggataaa ggaaaagaaa aggaacacga agttagggtt agagacaggg gtggcaattt
      601 gggagtgagt attgatggtg gtgagcatga tcatgatcat gatgatgagg atgatgatag
      661 tgaaggtgga ggtgtaggga ttttgcatca gaatttgact tctgcaagta gtgcacttca
      721 aggtttgttg agaaaattag gtgcagggtt ggatgatttg ttgccgtcat ctgcaatggc
      781 ggcagcatcg tcttcacatc agagtgggcg gttaaagaag atgctttcga gtttgagagc
      841 tgatggggaa gaagggaagc aagttgaggc tttgacacag ttatgtgata tgctttctat
      901 tggtacagag gattcgttga gtacgttttc ggttgattct tttgttcctg tacttgttgg
      961 gttacttaat catgaaagca atccggatat tatgttgctt gctgcaaggg cacttacaca
     1021 tctctgtgat gtgttgccgt cttcgtgtgc tgctgtggtg cattatggtg cggtttcatg
     1081 tttcgttgct aggctgctta ccattgagta catggacttg gctgaacagt cattgcaagc
     1141 tctgaagaag atatctcagg agcacccaac tgcttgcttg cgagcaggag cgttaatggc
     1201 agtgctttct tatcttgact tcttttcaac aggagttcag cgtgtggcgt tatctactgc
     1261 tgcaaatatg tgcaagaagc ttccatctga tgcagctgat tttgtcatgg aagccgttcc
     1321 tttattgact aatcttcttc agtaccatga tgcaaaggtt ttggagcatg cttcagtttg
     1381 tttgacccga attgcagaag catttgcagc atcttctgat caacttgatg agctttgtgt
     1441 acatggattg gttaagcaag cagctactct catttcaact agttcttctg gaggtggaca
     1501 agcatctctt agtacatcta catacacggg cttaatccga ttgctgtcta catgtgcaag
     1561 tggctcccct ttaggatcta aaactttgct ccatttagga atcagtggta ttctgaaaga
     1621 tatattatca ggttctggtc tcgttgcaac aatgtctgtg tcacctgcct tgagtagacc
     1681 accagagcag atttttgaga ttgtcaattt ggcaaacgag cttcttcctc ctttgtctaa
     1741 cggaaccatt actcttccta ctactagtaa tgtatttgtc aaagggtctc ttataaagaa
     1801 gacatcggct ggaacttcta ttaagcagga agacttgagc gatggtgcac ctgaggtatc
     1861 agctcgtgag aaattgttaa ccgatcagcc cgaacttttg cagcaatttg ggatggatct
     1921 gcttcctgtt ttgattcagg tgtacgggtc cagtgtaaat gcacctgtgc gtcacaaatg
     1981 tctttcggtt atcggcaagt tgatgtactt cagtagggct gatatgatcc agtctctact
     2041 tggcgtggca aacatatcaa gtttcttggc tggggttttg gcgtggaagg acccgcaagt
     2101 gttggtaccg tcgcttcaaa ttgcggagat actaatggag aagcttccgg aaactttcag
     2161 taagatgttc gtgagagaag gtgtcgttca tgcaatcgat acgcttgctg gattatcatc
     2221 tggtgatgtt atttcttcac cattgtcaaa tgagaaggtt aatgattcta tacctggatc
     2281 ttcatcacgt tcgaggcgtt atcgacaccg cattggtaat tccaatactg atgtaaatgt
     2341 aaatgctgct gaagatttaa aaaactcggg ctcccttgga aacaatcaag aattaccggg
     2401 cgttagttct agtattcgat tggcggttag tacaagtgca aaagctttca aagataaata
     2461 ctttccttct gaacccggat caactgaagt tggggttaca gatgatcttc tacatttgaa
     2521 aaatctttgt aagaagttgg gttctgctgt ggatgatcaa aagatgaaat cgaaagggaa
     2581 atcaaaagct tttggtccca agtttactga tttttcacct gtaaaggaag ataacttgtt
     2641 aggagtgata accgagttgc ttaacgagct aacgaaagat gacggtgttt ctacgtttga
     2701 attcattggt agtggtgttg tatctgcttt attgaactac ttttcttgtg gatacttttc
     2761 aaaagaaaaa gtatccgaaa ccgacttgtc taagttacgc caactagcta ttaaaagata
     2821 cacgtcgttt atagaaattg cacttccgtt aagtgttaac gagggaaaac atgctcctat
     2881 gagtgttctt gttcagaagc ttcaatttgc tttaacatct ttagaacgtt tcccggttgt
     2941 tttgagtcag aatgctagat catctactgg taacgtacgg ttgtcatctg gtcttggcgc
     3001 gttatctcag ccgttcaaat taaggctttg cagagcacac ggtgaaaagg ctcttcgtga
     3061 ttattctaca aatattgttc ttattgatcc tttggccagt ttagcagctg tggaagactt
     3121 tctttggcca cgtgttcaac gtactgagtc tagtcagcat ccttctggga ccacacctgt
     3181 aggagctggg gcttcgtctc cgttaactcc tgcgggtgcg acacgtcgtc agtccatgag
     3241 atccaagtca gcaattagta ttggtgactc agctaaaaag gagacacctc aagagaagaa
     3301 tgcaagctct tcaaagggga aggggaaagc tgtcttaaag ccaggtcaag atgacggaag
     3361 aggggcccca caaactagga atgctgctaa gagaagggcg tctttggata aagacgcaca
     3421 gatgaaatct gttgacggag agtctacttc cgaggatgat gactttgaca tatcacgagt
     3481 tgagattgat gacacattag tgattgaaga tgaagaaatt gccgaggaag acgatgaaga
     3541 tcaggatgac gtattagggg atgattctca tgctgtttgc acgccagaca aagttcacga
     3601 tgttaaattg ggcgactcag cagaagaacg acccgttgac agccagacaa atcccgcatc
     3661 tggttccagc agtcgaggta ccgccaatag gggctcagac tctttaggtt caaggggtac
     3721 catgtcattt gccgccgccg caatggcggg gcttgcgtcg gctaacggca gaggtattag
     3781 ggctggcagc agagaccgcc acgggcgtcc ccttgatact ccaagactcg tattttcttc
     3841 aggcggaaag caacttaacc gccatttaac catatatcaa gccattcaga gacagcttgt
     3901 taatgatgaa gatgacgatg agaagtacaa cggtacagat tttgcgtcta gtgatggaag
     3961 cagattatgg ggtgacattt ataccattac ataccaacga gccgacactc aaacagtttc
     4021 aacaaccccg tctaaatcag ttactaaagc ggggtccacc tcaaactcca ataatgattc
     4081 tagaacccat caaatgtctc ttcttgacag catcttacaa ggggagctac cctgtgatct
     4141 ggaaaagaac aaccctactt acaacatatt gtctctatta cgcgtgttag agggcttaaa
     4201 ccagctggca ccacggttgc gtgtccagtc agcaactgac agtttcgctg aagggaaaat
     4261 ctcgagtctc gatgatctca atgttactgg tgttagggtt tcatctgatg agtttatcaa
     4321 tagcaaatta actccaaaat tgtctagaca aatacaagat gctcttgcac tttgcagtgg
     4381 tagtcttcca tcatggtgtt atcagttaac aaaagcttgc ccgtttttgt ttccctttga
     4441 aataagacgt cagtattttt attcaactgc tttcgggttg tctcgtgcat tacatcgact
     4501 tcaacaacag cagggtgcag atggacatgg atctacgaac gaacgggaat tcagggttgg
     4561 aagattacaa cgccaaaagg ttcgcgtttc acgaaaccgt atattggatt ctgctgcaaa
     4621 agttatggaa atgtattcga gccaaaaggc agttcttgaa gtagaatatt ttggtgaagt
     4681 tggaactggt cttggtccta ctttagagtt ttatacttta ttaagtcatg accttcaaaa
     4741 ggaaggactt aaaatgtgga gatcaaattg tcttgatgag aagacagctg gcaagggtgg
     4801 cggtgacctt atcttagctc cccttggcct attcccatgc ccttggccca ttacttctga
     4861 agatggctcg ttttctaaag taaccgaaca ttttcgtctt cttggtcgtg taatggctaa
     4921 agcacttcaa gatgggcggc ttttggacct gcctctttca gcaccattct ataagcttgt
     4981 ggttgggcag gaacttgatt tacatgacat ttcattgttt gatgccgaat ttggtaagac
     5041 gttgcaagag ttgcaagctc ttgttagccg gaaacagtac ttagagtcca tacagaacca
     5101 aaatgaaatt ctaaacttaa ggtttagggg ggcgccagtt gaagatcttt gcttggactt
     5161 cacgcttcct ggctatcctg attatatcct taaaacaggc gatgacaatg ttgatttaga
     5221 caatttggag gagtacattt ctctggtcgt tgatgcttct gtcaagactg gtatcacacg
     5281 ccaaatggaa gcatttaggg ctgggtttaa tcaggtcttt gacatttcat ccttacaaat
     5341 attttctcca agtgagttgg actatttact ttgcgggcgt ggagagttgt gggaggctga
     5401 tacactcgtt gaacatataa aattcgatca tggatacact tccaagagtc ctgcaatagt
     5461 taatgtgctt gagatattgg gagagtttaa tccagaacag caacgttcat tttgtcaatt
     5521 tgtgactggc gcccctcgtc ttcctcctgg cggtttggcg gtgttgaatc cgaaattgac
     5581 tattgtcaga aagcattcat caacagccaa caatacggcg tccaatgctg ctggagtttc
     5641 agaatctgcg gatgatgatt tgccaagtgt catgacatgt gccaattacc taaagcttcc
     5701 tccgtattcc accaaggaga tcatgttcaa gaaacttgtt tatgctatta gtgaaggaca
     5761 gggatcattt gatttgtcat aaggaggttt catttgaaac taacccagtt gtgtgtatat
     5821 tgtatccaag aatctcttga tagcttgttg cataattggg gcttaataaa gggtctcatt
     5881 tcgcgccttc cccaagtgtc accgtcagtg atggcatagt tatggttaag ttggatgcaa
     5941 atgtggatca gaaatgattg gtcatggctt gttaaaaaag gctcaaagag aagataagaa
     6001 tttggcgagc tgtttttatt attcagtaga cgaatggttt tgtaaataaa tagtggaata
     6061 tcgtataact tcttgtgcct acaacttgaa tgggttgttg acattttaca atcaaccatc
     6121 gtacattttg tagtttcttt tcatttactt caattttttg tttatgcaaa ccttattttg
     6181 gaactattgt attgtatttg cttctcttgt tatgctcatt ttgttatttt tgtt
//
LOCUS       XM_071829776            3367 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839650), mRNA.
ACCESSION   XM_071829776
VERSION     XM_071829776.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3367
                     /gene="LOC139839650"
                     /note="uncharacterized LOC139839650; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839650"
     CDS             315..3176
                     /gene="LOC139839650"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685877.1"
                     /db_xref="GeneID:139839650"
                     /translation="MDDSMDDSWTIRTSETDQKAIDQLYDVYPDLFTIVLHHGGYFRM
                     GSEVVYTEGKIDYIDCFDIEKFCLGQLDSVMQELGYDPTRSVVYRFLKPNTNMDTGLN
                     LLNDNEHRDYLLSCLEDGDVIYRQIDVYAEHEDMKGKRLWSEQINNDNLVVGGVHSDG
                     SLVEGDNSEGSDSEDSDYIVDDENEILDVHVEMKDFNFNIDKNVEFMGNGCNSFEDDE
                     VNIEGTELEVLNNDGFESYDSQSDEEGVRKKRIRNHKKEVEGSVQVGKTIFYLGQKFE
                     SKSEVRQAVRMHAIETRRKLVIVKNDKRRIRVKCEGLCINSKGGEIVSQSDLSKKTKC
                     DVGPSKLRVKGGVVGKSKEKVTSQIKKAGESCSGKTNKWAKRELHIVCEWVLLVSKEK
                     DSEEWEVRTYRHQHECQPARILKFCTYQFLSNRLVPQIQKNPKIPIKAVRSYLETETE
                     LIISEHKAYRAVRKATKMIQGDYKSQYAELRDYVCELKRGNVDTTVKFEVEPGTLKSE
                     TRVFKRIYICLGPLKKGFKAIGRDLLGLDGAFMKQPATGCILSAVGVDSNNGIYPVAY
                     AIVEQECGSSWTWFLECLGQDLDLSTNSNFTFISDRQKGLIQAVTNVFPCAEHRHCLR
                     HIHGNMKGDFRGVAYKNHLWRCASVTTVPEFEQAMQQLKEFDNEAFVWLAKIPAHQWA
                     RSHFTGRAVSDVLLSNMCECFNRWLVDARDKPIVTALEYIREYCMKRIVNVKKNISKT
                     NGPLTPAATKLFDKIKSEAHQCTVLWGGDQRYQVSGKVNQYVVDMETRSCACRKWELT
                     GIPCKHAIAVFYNMSENGLETGEPETWVHPVYLLDTWIKTYQYTIEPLNGRSLWPKAE
                     GMFTLVSPKTISTPGRPKKKRRLSKNEVDVIGDSGKLSSKGKLKKCGTCGTYGHNKST
                     CTGEKKRSGNVDNKWTKKTVKVKLSSKKTMVVGKGKKKK"
     misc_feature    1125..>1250
                     /gene="LOC139839650"
                     /note="MuDR family transposase; Region: DBD_Tnp_Mut;
                     pfam03108"
                     /db_xref="CDD:427142"
     misc_feature    1911..2192
                     /gene="LOC139839650"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    2676..>2741
                     /gene="LOC139839650"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 ttttttgctc agttggtccc tctattatac cccaaatcgc tggtttggtc cctcagtttt
       61 taatttggca atcagagtcc ctttattatt ttaattttgc aattggagtc ttccgtctaa
      121 cggacatcca aatcgaacgt taactcccat cacgtgagtt acacgtgatg ggtaatatcg
      181 gaattaattt taattcttgg tactgaataa acccaaacgg gtatggtccc ccactattat
      241 ccaccgattt tcacactcat ccctccaaat agtgttaacc acgaagtaaa acctaaaagc
      301 aaaattgatt atcaatggat gattcaatgg atgattcatg gactattcgt acatcagaaa
      361 ctgatcaaaa ggctatcgac caattatacg atgtataccc tgatttgttc acgattgtgt
      421 tacatcatgg tggatatttt agaatgggta gtgaagttgt gtacacagaa ggtaaaattg
      481 attacattga ttgttttgac attgaaaagt tttgtttagg acaactggat tcagtcatgc
      541 aagaattagg ttatgatccc accaggtctg tggtatatcg ttttcttaaa cccaatacaa
      601 acatggatac tgggttaaat cttttaaatg ataatgaaca tagggactat ttgcttagtt
      661 gtctagaaga tggtgatgtg atttataggc aaattgatgt gtatgctgaa catgaggata
      721 tgaaagggaa gaggttatgg tcagaacaaa ttaataatga taacttagta gttggtggtg
      781 ttcacagtga tgggagctta gtagagggtg ataacagtga aggtagtgac tctgaggata
      841 gtgattacat tgttgatgat gaaaatgaga ttttggatgt tcatgtagag atgaaagatt
      901 ttaattttaa cattgataag aatgtagagt ttatgggaaa tggctgtaac tcatttgaag
      961 atgatgaggt caatattgag ggtacagaat tggaagtgtt gaacaatgat ggttttgaaa
     1021 gctatgattc tcaaagtgat gaagaagggg taaggaagaa gagaattcgt aatcataaaa
     1081 aggaggttga aggtagtgtt caagtgggaa aaactatctt ctatcttgga caaaagtttg
     1141 aaagtaaatc agaggttagg caagctgtga gaatgcatgc tattgaaact aggagaaagc
     1201 tagttattgt taagaatgac aaaagaagaa ttagggttaa atgtgaaggg ttgtgtataa
     1261 attcaaaagg tggtgagata gttagtcaaa gtgatttgtc aaagaagaca aaatgtgatg
     1321 tggggcccag taaattaaga gttaaaggtg gtgtagttgg gaagagtaaa gagaaagtga
     1381 ctagtcaaat taaaaaagca ggggaatctt gtagtgggaa gactaacaaa tgggcaaaaa
     1441 gggaattaca cattgtttgt gagtgggtgt tgttggtatc caaagaaaaa gatagtgaag
     1501 aatgggaggt tagaacctac agacaccaac atgaatgtca acctgcaaga atactaaaat
     1561 tctgcactta ccaattttta tcaaatcggt tggtacctca aattcaaaag aatccaaaga
     1621 taccaattaa agctgtcaga tcatatttgg aaacagaaac tgaattaatc atcagtgagc
     1681 ataaagcata tcgtgctgtg agaaaggcaa caaagatgat tcaaggggat tataaatctc
     1741 agtatgctga gctcagagat tatgtttgtg aattaaagag aggtaatgtt gatactactg
     1801 ttaagtttga ggttgagcca ggaaccctaa agtctgaaac tagggttttc aagagaattt
     1861 acatttgttt gggaccattg aagaagggtt ttaaagcaat aggtagagat ctacttgggt
     1921 tggatggtgc ttttatgaaa caacctgcaa ctggttgtat tttgagtgct gtaggggttg
     1981 attcaaacaa tggcatatat cctgtagcat atgccattgt tgaacaagag tgtggttcat
     2041 cctggacttg gttcttagag tgcttgggtc aagatcttga cttgtctacc aattctaact
     2101 ttacttttat cagtgacagg caaaagggtt taatacaagc tgttacaaat gtgtttcctt
     2161 gtgctgagca tagacattgc cttagacata ttcatgggaa tatgaaaggg gatttcaggg
     2221 gtgttgctta taagaatcac ttgtggagat gtgctagtgt aacaacagtt cctgagtttg
     2281 agcaggctat gcaacaattg aaggagtttg ataatgaagc ttttgtttgg ttagctaaaa
     2341 ttcctgccca tcagtgggca aggagtcatt ttacaggaag ggctgtatca gatgtgttgc
     2401 tcagtaacat gtgtgagtgt ttcaacagat ggttagttga tgcacgtgac aaacccatag
     2461 ttacagcttt agaatacatc cgagagtatt gcatgaagag aattgttaat gtaaagaaaa
     2521 acatttccaa gactaatggc cctttaacac ctgcagccac caaattgttt gacaaaatca
     2581 aatctgaggc tcaccagtgt actgtcttat ggggtggaga tcaaaggtac caagtgagtg
     2641 gaaaagttaa tcaatatgtt gtggatatgg agactagatc atgtgcttgt agaaagtggg
     2701 aactaacagg gataccttgt aagcatgcaa ttgcagtgtt ttataacatg agtgaaaatg
     2761 gtttggaaac tggtgaacca gaaacatggg ttcatccagt gtatttgtta gatacatgga
     2821 tcaaaactta ccaatacacc attgagccat tgaatgggag aagcttatgg ccaaaggcag
     2881 aaggcatgtt cactctggta tcaccaaaga ctatttccac acctggtcgt ccaaaaaaga
     2941 aaagaaggtt gtccaaaaat gaagttgatg tcattggtga tagtggtaaa cttagctcaa
     3001 aaggcaagct aaagaagtgt ggcacatgtg gtacttatgg acacaataag agtacttgta
     3061 caggtgagaa gaaaagaagt gggaatgtgg ataacaagtg gacaaaaaag acagtgaaag
     3121 ttaagctatc ttcaaagaag acaatggtag ttggaaaagg gaagaagaag aagtgaatgt
     3181 tggtggtggt ttgtgtttta atcatgtgtt ttatgtctac ttaaaacttg ttatgtgact
     3241 tggtacaatg tttgtatttt attaaggtgt gttgttgtct tttggtaagt ttaagcacat
     3301 ttggtaactg gtactacgta cttatgttga cttttggaat ctatgacatt tggtaatgct
     3361 tgtatgt
//
LOCUS       XM_071829777            2712 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839651), mRNA.
ACCESSION   XM_071829777
VERSION     XM_071829777.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2712
                     /gene="LOC139839651"
                     /note="uncharacterized LOC139839651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839651"
     CDS             89..2452
                     /gene="LOC139839651"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685878.1"
                     /db_xref="GeneID:139839651"
                     /translation="MYNGIGLQTARGSGTNGYIQSNKFFVKPRANKVLTANSGGYDSG
                     QGIAGVNRKPNKDILEHDRKRQIQLKLTVLEDKLVDQGYTDDEIGEKLVEARKTLEAA
                     MASEDAGGATAVVLHSDQKYSDTQTHQVAARKQKQMETLKNALGIVHEEEVKKYALVS
                     DDEKMDDADKERDDKKGVPGADDKFRKDAKIGKDRLDALKHYKKTSNKRRDTSSDSES
                     DSEGDGDTDSDSSREHVKKTRKKPLKSSRSDDDEESDSDVAIRKSKRKPPSRHSKGVR
                     HDSDDSDYAKKRVRNVKRYESDGSSSSDERSNIKRGKGKPLPYRSRRHDSDDDSDDER
                     SQQRRMESKVGKGINDRWDGGSSKHDVVNDTSPVREKRHEKERPARAGRSRRGNDDED
                     SDKDVRRTKDEVDREGRRQRGNDFEDLNKNDMRLREREVGRGLRRQHDVRREESSKND
                     TRTVEKSHRGIEETAKDRFAKGERRYDSDDEEDSDRNTREEVGRGGRRQHDVSREELN
                     KKDTRTGEKGHRGIEEPAKDRFAKGGRRRHDSDEDSDSDSDRNTREEIDRGGRRQHDV
                     NREELNKKDTRTGEKSHHGIEEPAKDRFAKGGRRRYDSDSDSDSDRNTREEIGRGGRK
                     QHDVKREELNKKEIRTGEKRQRDIEEPRKERHEIVKRRRHDSDDDDDEDSDKRTKEKV
                     ERGGIRQEDEGRRKSKIIDEDEKYVEGRKESRDEKDREVRKRKTNEDETYNGREHYQS
                     KYSRDHGGERESRRGERDRQVDQSKRARYDNERRYDSGKHGAGRSRR"
     misc_feature    248..385
                     /gene="LOC139839651"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix proteins, SRRM2, SRRM3 and similar proteins;
                     Region: cwf21_SRRM2-like; cd21373"
                     /db_xref="CDD:410600"
     misc_feature    1148..>1774
                     /gene="LOC139839651"
                     /note="transcription termination factor Rho; Provisional;
                     Region: PRK12678"
                     /db_xref="CDD:237171"
     misc_feature    1841..>2449
                     /gene="LOC139839651"
                     /note="transcription termination factor Rho; Provisional;
                     Region: PRK12678"
                     /db_xref="CDD:237171"
     polyA_site      2712
                     /gene="LOC139839651"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttcctggtt agggtttcaa aagtttccga ttaaaaacac cgcaaattag ggtttcaaat
       61 tttcaataca aatcaatcaa tcaaaatcat gtacaacgga atcggattgc aaaccgctcg
      121 tggttccgga accaacggtt acatacagag caacaagttc ttcgtgaagc cacgtgccaa
      181 taaagtatta actgcaaaca gcggcggata cgattccggt caaggtatcg ccggcgtaaa
      241 tcgaaaacct aataaggata ttctagaaca tgaccgtaag cgtcagatcc agcttaagct
      301 tactgttctt gaagataaac ttgttgatca aggttataca gatgatgaaa ttggtgaaaa
      361 attagttgaa gctcgtaaga ctttggaagc tgctatggca tctgaagatg ccggtggtgc
      421 caccgccgta gttttgcact ccgatcaaaa gtattcagat acacagactc atcaagtggc
      481 agcacgtaag cagaagcaga tggaaactct caaaaatgct cttgggatag tacatgaaga
      541 agaggtaaaa aagtatgcac ttgtctctga tgatgaaaaa atggatgatg cggataaaga
      601 aagggatgat aaaaaaggtg ttcctggagc tgatgataag tttagaaagg atgccaaaat
      661 tggtaaagac aggcttgatg cactcaaaca ttacaagaaa acttcaaaca aaagaagaga
      721 tacttcctca gatagtgaga gtgatagtga gggtgatggt gatactgatt cggatagtag
      781 tcgggaacat gtgaagaaga cgaggaagaa accacttaaa agtagtagaa gtgatgatga
      841 tgaagagtct gactctgatg ttgctataag aaaaagcaag cgaaaaccac caagcaggca
      901 tagtaaaggt gtaagacatg acagtgatga ttctgattat gctaaaaaac gtgttcgaaa
      961 tgtgaagaga tatgagtctg atggaagctc tagttctgat gaacggtcta acatcaaaag
     1021 gggaaagggg aaaccacttc cttacaggag caggagacat gattcagatg atgactctga
     1081 tgatgagaga agtcaacaaa ggagaatgga aagcaaagta ggaaaaggca tcaatgatag
     1141 gtgggatgga ggtagtagta agcacgatgt tgtaaatgat actagtcccg ttagagaaaa
     1201 aagacatgag aaagagagac ctgcaagggc gggaagaagt agacgtggca acgatgacga
     1261 ggattccgac aaagacgtgc gtcgcacgaa agacgaagtt gatagggagg gaaggagaca
     1321 acgtggaaat gattttgagg atcttaacaa aaacgatatg agacttagag aaagggaagt
     1381 tggaaggggt ttaagaagac aacatgatgt tcgacgtgaa gaatcaagta aaaatgacac
     1441 cagaactgtc gaaaaaagcc atcgtggtat tgaagaaacc gcaaaagata ggtttgcaaa
     1501 aggtgaaagg aggtatgaca gtgacgacga ggaggattct gacagaaaca cgagagagga
     1561 agttggtagg ggtggaagaa ggcaacatga tgttagccgg gaagaattaa ataaaaagga
     1621 cacccgaaca ggtgaaaaag gtcatcgtgg tattgaagaa cctgcaaaag ataggtttgc
     1681 taaaggtgga aggaggaggc atgatagtga tgaggattcg gattcggatt ctgacaggaa
     1741 cacaagagag gaaattgata gaggtggaag aaggcaacat gatgttaacc gtgaagaatt
     1801 aaataaaaag gacacccgaa caggtgaaaa aagtcatcat ggtattgaag aacccgcaaa
     1861 agataggttc gctaaaggtg gacggaggag gtatgatagt gattcggatt cggattctga
     1921 caggaacaca agagaggaaa tcggtagagg tggaagaaag cagcatgatg ttaagcgtga
     1981 agaattaaat aaaaaggaga tcagaacggg tgaaaaaagg cagcgtgata ttgaagaacc
     2041 cagaaaagag agacatgaaa ttgttaaaag gaggaggcat gatagtgatg atgatgatga
     2101 tgaggattct gacaaacgca ctaaagaaaa agttgaaagg ggtggaataa ggcaagaaga
     2161 tgagggtaga cgcaagagca agattattga tgaagatgag aagtatgtag aaggaagaaa
     2221 agaaagtagg gatgaaaaag atcgtgaggt tagaaagcgt aaaacaaatg aagatgaaac
     2281 atacaatggt agggagcatt atcaatcaaa gtatagcaga gaccatggag gagagcgtga
     2341 aagcagaagg ggtgagagag atcgacaagt ggatcaatcg aagagagcca gatatgataa
     2401 tgagaggagg tacgacagtg gaaagcatgg tgctggacgg tcgaggcggt gagcctttcg
     2461 tatgactaat gaatgatatt gggcaaagct tgacgatgat cttgaagaag aggtacctta
     2521 tttctaagct gctatgcttg catccactcg catgatgaag acatgtagct gttaaaaaag
     2581 atgtgtggag cccattactg atgttggaat atatcttttg ttttgttcaa ttgttgttgt
     2641 cccagaagtc ttatgctttt gatagatata cttaaatgta ctgtgggtgc tttttattat
     2701 tgtgttatga ct
//
LOCUS       XM_071829778             960 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycine-rich protein 2-like
            (LOC139839652), mRNA.
ACCESSION   XM_071829778
VERSION     XM_071829778.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..960
                     /gene="LOC139839652"
                     /note="glycine-rich protein 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139839652"
     CDS             103..708
                     /gene="LOC139839652"
                     /codon_start=1
                     /product="glycine-rich protein 2-like"
                     /protein_id="XP_071685879.1"
                     /db_xref="GeneID:139839652"
                     /translation="MGDDGVRKSGTVKWFNDTKGFGFITQDDGSEDLFVHQSSIRTDG
                     FRSLGDGETVEYVIENGSDGRAKAADVTGPAEGPVQGSNRGGGGGRGGGGDRYGGGGG
                     YTGGGRGGGDRYGGGGGYGGGGGGYGGGGGYGGGGGGNACFKCGESGHMARECSQDGG
                     GGGGYGGRGGGGGRGGGGGGGGCYNCGEDGHFARECPNSSR"
     misc_feature    130..324
                     /gene="LOC139839652"
                     /note="'Cold-shock' DNA-binding domain; Region: CSD;
                     pfam00313"
                     /db_xref="CDD:278729"
     misc_feature    order(142..144,169..171,202..204,292..294)
                     /gene="LOC139839652"
                     /note="DNA-binding site [nucleotide binding]; DNA binding
                     site"
                     /db_xref="CDD:239905"
     misc_feature    order(160..180,199..210)
                     /gene="LOC139839652"
                     /note="RNA-binding motif [active]"
                     /db_xref="CDD:239905"
     misc_feature    <523..>705
                     /gene="LOC139839652"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     polyA_site      960
                     /gene="LOC139839652"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gattgacatc caaagagata gagagcaggg tttcctctct catttataat tttggggatt
       61 tttcaaattt ttactgtttt cattcaaaac aaagctaaaa aaatgggtga tgacggcgtt
      121 agaaaatcag gaaccgtaaa gtggttcaac gatactaagg gttttggttt cataacgcag
      181 gatgatggaa gtgaagatct gtttgttcat caatcgtcga tcagaaccga tggattccgt
      241 agtctcggtg acggtgaaac tgtcgagtat gtgattgaaa acggttctga tggccgtgct
      301 aaagctgctg atgtaactgg acctgctgag ggacctgtgc aagggagcaa ccgtggtggc
      361 ggtggtggcc gtggcggagg tggtgaccgt tacggcggtg gtggtggtta tactggtggt
      421 ggccgtggtg gtggtgatcg ttatggaggc ggtggtggtt atggcggagg tggcggcggc
      481 tatggaggtg gtggtggtta tggaggtgga ggtggtggta atgcttgttt taagtgcggg
      541 gagagtggtc acatggctag agagtgttcc caggatggtg gcggaggtgg tggttacggt
      601 ggccgcggag gtggcggcgg ccgtggaggt ggaggtggcg gtggcggctg ctacaattgt
      661 ggtgaagatg gacattttgc tcgtgaatgt cctaattcca gtcgttgatg tgtgagaaga
      721 tgagaatggt taatgcgtct ccagtatttt aatttttctt tgtggtctgt tttagttttt
      781 tttgttgttg tctactttga agaatcaatg gatgatggat ccataatcag ttgttttggt
      841 ataatgactg tttaatatct acagtactag ggtttgtacg tgctggttct tgctagggtc
      901 tcggatatgt atgtatgaaa tgaaaaatca aaatgaatgg atgactatta gtgtttctct
//
LOCUS       XM_071829779            1015 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cold shock domain-containing
            protein 4-like (LOC139839653), mRNA.
ACCESSION   XM_071829779
VERSION     XM_071829779.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1015
                     /gene="LOC139839653"
                     /note="cold shock domain-containing protein 4-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 26 Proteins"
                     /db_xref="GeneID:139839653"
     CDS             91..684
                     /gene="LOC139839653"
                     /codon_start=1
                     /product="cold shock domain-containing protein 4-like"
                     /protein_id="XP_071685880.1"
                     /db_xref="GeneID:139839653"
                     /translation="MADNGARLSGTVKWFNDTKGFGFITPEDGGEEIFVHQSSIRSDG
                     FRSLGDGESVEYVIENGSDGRAKAADVTGPNEGPVQGSTRGGGGGGRGGGGDRYGGGG
                     GYNGGSRGGRGGGGDRYGGGGGDRYGGGGGNACFKCGESGHMARECTQGGGGGYGGRG
                     GGGYGGGGGRGGGGGGSCYNCGEDGHFSRECPNPNNR"
     misc_feature    118..312
                     /gene="LOC139839653"
                     /note="'Cold-shock' DNA-binding domain; Region: CSD;
                     pfam00313"
                     /db_xref="CDD:278729"
     misc_feature    order(130..132,157..159,190..192,280..282)
                     /gene="LOC139839653"
                     /note="DNA-binding site [nucleotide binding]; DNA binding
                     site"
                     /db_xref="CDD:239905"
     misc_feature    order(148..168,187..198)
                     /gene="LOC139839653"
                     /note="RNA-binding motif [active]"
                     /db_xref="CDD:239905"
     misc_feature    <490..681
                     /gene="LOC139839653"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 gtaaaggaga gagactaggg ttttctcctc catcttctat aagtttgggt tttaggtttt
       61 cattcaaatt caaaacttta taaaaataaa atggctgata acggcgctag gctatcagga
      121 accgtcaagt ggttcaacga tactaagggt ttcggtttta ttacgccgga agatggcggc
      181 gaagaaattt ttgttcatca gtcgtccatc agatccgatg gattccgtag tctcggtgac
      241 ggtgaatcag tcgagtatgt tattgaaaat ggttctgatg gccgtgctaa agctgctgat
      301 gtaactggtc ctaatgaggg accggttcaa ggaagcactc gtggtggcgg cggaggcggc
      361 cgtggcggag gtggtgatcg gtacggaggt ggcggtggtt ataatggtgg tagccgtggt
      421 ggacgcggag gcggtggtga tcgttacggt ggtggcggtg gtgatcgtta cggtggtggc
      481 ggtggtaatg cttgtttcaa gtgtggtgag agtggccata tggctaggga gtgtactcag
      541 ggaggcggtg gaggttatgg tggccgtgga ggtggtggtt atggcggcgg cggtggccgt
      601 ggtggcggcg gcggcggtag ctgctataac tgtggtgaag atggtcactt ctctcgtgaa
      661 tgccctaacc ccaacaaccg ttgatctagt ggaagataaa aagggttaat gtgtcttttc
      721 acatttagct tagtttatat ctttctcttt atatcgctta atgtcttatt ggtgtctgtc
      781 gtctgtggtg aagaatgaat ggatgtaaat ccattagtgt ttttttttat ttatgctatg
      841 ctgacttttt agttaagttg gggtttgtta tgatgatggt gatggtcatc tcttagggtt
      901 tcattagttt tcagtcttta tgtttgtggg gattcaagct tggttttatt ggtattatga
      961 catacatgta tgtatgaatg gaatattgaa atgagtaaaa gattattgaa gtttc
//
LOCUS       XM_071829780            1045 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bZIP transcription factor
            44-like (LOC139839654), mRNA.
ACCESSION   XM_071829780
VERSION     XM_071829780.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1045
                     /gene="LOC139839654"
                     /note="bZIP transcription factor 44-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139839654"
     CDS             369..860
                     /gene="LOC139839654"
                     /codon_start=1
                     /product="bZIP transcription factor 44-like"
                     /protein_id="XP_071685881.1"
                     /db_xref="GeneID:139839654"
                     /translation="MACTSGNSTGSTQIRNSGSEDGLMDQRKRKRMESNRESARRSRI
                     RKQKHIDDLIRESNRIKNDNDQIRTSINVTTQRFIEMEADNSVLRAQVSELNQRLNSL
                     NEIMNYINTNVNVNCTTNNNNQFVTGGTSGLGEFDMIENPWNMMYVNQQSIMASAADM
                     FGY"
     misc_feature    450..602
                     /gene="LOC139839654"
                     /note="Basic leucine zipper (bZIP) domain of Plant G-box
                     binding factor 1 (GBF1)-like transcription factors: a
                     DNA-binding and dimerization domain; Region:
                     bZIP_plant_GBF1; cd14702"
                     /db_xref="CDD:269850"
     misc_feature    450..602
                     /gene="LOC139839654"
                     /note="coiled coil [structural motif]; Region: coiled
                     coil"
                     /db_xref="CDD:269850"
     misc_feature    order(459..464,468..476,480..497,501..509)
                     /gene="LOC139839654"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269850"
     misc_feature    order(504..506,513..518,525..530,534..539,546..551,
                     555..560,567..572,576..581,588..593,597..602)
                     /gene="LOC139839654"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:269850"
     polyA_site      1045
                     /gene="LOC139839654"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacctcttcc attctcattt cccccaactt tttcttatta atttcatcct ttttttttct
       61 tctagcttta tctgaatatc ttcttcatgc ttcaattttg ttatatggat attaatcatt
      121 aatgtctcct gttctttgtg aaattctccg ttccggtttt atgatcaatt cctcactcgt
      181 tcgccggact caccttgttc aatcgttttc cgttgtcttt ctttactggt tttacgtttt
      241 ttcagaactc actaacgtcg attcacgtct agatccttca tattaattaa ttagttaatt
      301 atttttttat tttgtatttt aaaattatcg ttacacatcc gttaattagc tatctcaata
      361 attcattcat ggcttgtaca agtggtaatt caaccgggtc gacccagatc cgtaactcgg
      421 gatcagaaga cgggttgatg gatcaaagga aaagaaaaag aatggaatca aaccgcgaat
      481 cagcccgtag atcaaggatc aggaaacaaa aacatattga tgatttgatc cgtgaatcta
      541 atcggatcaa gaacgataac gatcagatcc ggacctcgat taatgttacg acacaacgtt
      601 ttattgaaat ggaagcagat aattctgttt taagggcgca ggttagtgag cttaatcaaa
      661 ggttgaattc acttaatgaa ataatgaatt acattaacac aaatgttaat gttaattgta
      721 caacaaataa taataatcaa tttgtgactg gtggtacaag tggattgggt gagtttgata
      781 tgattgagaa tccatggaac atgatgtatg ttaatcaaca atcaatcatg gcttctgctg
      841 ctgatatgtt tgggtactag tgattgttgc atgattaagg gctgtgcttt gttgggttgt
      901 accttttctt gtggagtcag gctttgttgg attgtactcc gtacctttta tgggtttgtg
      961 gggttaggct ttttgtgtta tcaaatgggt tatgattggg atctcatgaa ttattggatg
     1021 tagttataaa tattgttgaa gttta
//
LOCUS       XM_071829781            1467 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839655), transcript variant X1, mRNA.
ACCESSION   XM_071829781
VERSION     XM_071829781.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1467
                     /gene="LOC139839655"
                     /note="uncharacterized LOC139839655; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839655"
     CDS             162..1199
                     /gene="LOC139839655"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685882.1"
                     /db_xref="GeneID:139839655"
                     /translation="MSFSFFKALRPKTPQELAKAIKDSLMALDTKTVVEVKSLEKALE
                     EVEKNFGAMKVMLLGDGEVEPNTDQILQLATEICKEGVIVLFVHKLSILGWEARKDLV
                     QFWSILLKQKVGSTHCCVQFLEKHSDLLDFLVAGYDNKEIALNCGNMLRECIKFPTLA
                     KYMLESPSFELFFKYVELANFDVASDAFSTFKDLLTKHPVAVSEFLTSHYDEFFEQYR
                     KLLTSANYVTRRQSLKLLSEFLLEPPSSHIMKKYIAEVQHIKVMMTLLTDSSKNIQIS
                     AFHIFKIFVANPNKTREIKVILAKNHERLLDLLNNLSAGKGGDDDQFEEEKELIIKEI
                     EKVSQLPNLDS"
     misc_feature    174..1130
                     /gene="LOC139839655"
                     /note="Mo25-like; Region: Mo25; pfam08569"
                     /db_xref="CDD:462522"
ORIGIN      
        1 cacttataat tatcatatca tatgatcata tgattatgat cgtaattcat atgaaaacga
       61 ttattacaca ttttttccgc aatatatcaa aatccaccta ttaatttctt cattccttcc
      121 attgattaat tgcttgattg atcatcaatt gtaagcaaac gatgtcgttt tcgttcttca
      181 aggccttaag gcctaaaacc ccacaagaac tcgctaaagc aatcaaagac tccctcatgg
      241 ctcttgatac caaaactgtt gttgaggtta aatcactcga aaaggcgtta gaagaagttg
      301 agaagaattt tggcgcgatg aaggttatgc ttttaggaga tggggaagtt gaaccaaaca
      361 cggatcaaat tttgcaattg gcgacggaaa tatgtaaaga gggtgtaatt gttcttttcg
      421 ttcacaagtt atcgatactt gggtgggagg caagaaaaga tttagtccaa ttttggtcca
      481 tattattgaa gcaaaaagtt ggatcaacgc attgttgtgt tcaattcttg gagaaacatt
      541 cagacttatt agattttctg gttgcaggtt atgataacaa ggagattgcc ttaaattgcg
      601 gaaacatgtt gagggaatgc atcaagtttc caactttggc aaaatatatg ttggagtctc
      661 caagctttga acttttcttc aaatatgtgg aacttgcaaa ttttgatgtt gcttctgatg
      721 cattctccac ttttaaggat ttgcttacca aacatccagt tgcagtatct gaattcctaa
      781 cttcacatta tgatgagttc tttgagcagt acaggaaact tctaacttct gccaactatg
      841 taacaagaag gcagtctttg aagcttttat ctgagtttct tttggagcct ccaagttccc
      901 atataatgaa aaaatatatt gcagaagttc agcacattaa agtcatgatg acattgctta
      961 cggattcaag caaaaacatt cagatatctg cattccacat atttaagata tttgtggcta
     1021 atcctaataa gactcgagaa attaaagtta tattggcaaa gaaccatgaa agattgctgg
     1081 atttattaaa caatttgtct gctggaaaag gtggtgacga tgatcaattt gaagaagaaa
     1141 aggaacttat catcaaagaa atagaaaaag tatctcaact cccaaatctt gattcctagc
     1201 ttaagttttc agatacagga ccagcaattg accatctata tttggttgca gtaacagcca
     1261 attgctgcct acggtttcta aggtgattac atgtatcaaa tataaatcaa gtaatcttgt
     1321 gtagcatgac gtcatttata tgactttaac cgggtacaag ttattatatc gaagaactag
     1381 tcttgtaact ggatgctgag tttttatgta atataaaata aaatgtttgt aaccacgtct
     1441 tagtggaaca ttcatagtag tccgttt
//
LOCUS       XM_071829782            1415 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839655), transcript variant X2, mRNA.
ACCESSION   XM_071829782
VERSION     XM_071829782.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1415
                     /gene="LOC139839655"
                     /note="uncharacterized LOC139839655; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839655"
     CDS             162..1199
                     /gene="LOC139839655"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685883.1"
                     /db_xref="GeneID:139839655"
                     /translation="MSFSFFKALRPKTPQELAKAIKDSLMALDTKTVVEVKSLEKALE
                     EVEKNFGAMKVMLLGDGEVEPNTDQILQLATEICKEGVIVLFVHKLSILGWEARKDLV
                     QFWSILLKQKVGSTHCCVQFLEKHSDLLDFLVAGYDNKEIALNCGNMLRECIKFPTLA
                     KYMLESPSFELFFKYVELANFDVASDAFSTFKDLLTKHPVAVSEFLTSHYDEFFEQYR
                     KLLTSANYVTRRQSLKLLSEFLLEPPSSHIMKKYIAEVQHIKVMMTLLTDSSKNIQIS
                     AFHIFKIFVANPNKTREIKVILAKNHERLLDLLNNLSAGKGGDDDQFEEEKELIIKEI
                     EKVSQLPNLDS"
     misc_feature    174..1130
                     /gene="LOC139839655"
                     /note="Mo25-like; Region: Mo25; pfam08569"
                     /db_xref="CDD:462522"
ORIGIN      
        1 cacttataat tatcatatca tatgatcata tgattatgat cgtaattcat atgaaaacga
       61 ttattacaca ttttttccgc aatatatcaa aatccaccta ttaatttctt cattccttcc
      121 attgattaat tgcttgattg atcatcaatt gtaagcaaac gatgtcgttt tcgttcttca
      181 aggccttaag gcctaaaacc ccacaagaac tcgctaaagc aatcaaagac tccctcatgg
      241 ctcttgatac caaaactgtt gttgaggtta aatcactcga aaaggcgtta gaagaagttg
      301 agaagaattt tggcgcgatg aaggttatgc ttttaggaga tggggaagtt gaaccaaaca
      361 cggatcaaat tttgcaattg gcgacggaaa tatgtaaaga gggtgtaatt gttcttttcg
      421 ttcacaagtt atcgatactt gggtgggagg caagaaaaga tttagtccaa ttttggtcca
      481 tattattgaa gcaaaaagtt ggatcaacgc attgttgtgt tcaattcttg gagaaacatt
      541 cagacttatt agattttctg gttgcaggtt atgataacaa ggagattgcc ttaaattgcg
      601 gaaacatgtt gagggaatgc atcaagtttc caactttggc aaaatatatg ttggagtctc
      661 caagctttga acttttcttc aaatatgtgg aacttgcaaa ttttgatgtt gcttctgatg
      721 cattctccac ttttaaggat ttgcttacca aacatccagt tgcagtatct gaattcctaa
      781 cttcacatta tgatgagttc tttgagcagt acaggaaact tctaacttct gccaactatg
      841 taacaagaag gcagtctttg aagcttttat ctgagtttct tttggagcct ccaagttccc
      901 atataatgaa aaaatatatt gcagaagttc agcacattaa agtcatgatg acattgctta
      961 cggattcaag caaaaacatt cagatatctg cattccacat atttaagata tttgtggcta
     1021 atcctaataa gactcgagaa attaaagtta tattggcaaa gaaccatgaa agattgctgg
     1081 atttattaaa caatttgtct gctggaaaag gtggtgacga tgatcaattt gaagaagaaa
     1141 aggaacttat catcaaagaa atagaaaaag tatctcaact cccaaatctt gattcctagt
     1201 aacagccaat tgctgcctac ggtttctaag gtgattacat gtatcaaata taaatcaagt
     1261 aatcttgtgt agcatgacgt catttatatg actttaaccg ggtacaagtt attatatcga
     1321 agaactagtc ttgtaactgg atgctgagtt tttatgtaat ataaaataaa atgtttgtaa
     1381 ccacgtctta gtggaacatt catagtagtc cgttt
//
LOCUS       XM_071829783            1279 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839655), transcript variant X3, mRNA.
ACCESSION   XM_071829783
VERSION     XM_071829783.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1279
                     /gene="LOC139839655"
                     /note="uncharacterized LOC139839655; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839655"
     CDS             162..1199
                     /gene="LOC139839655"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685884.1"
                     /db_xref="GeneID:139839655"
                     /translation="MSFSFFKALRPKTPQELAKAIKDSLMALDTKTVVEVKSLEKALE
                     EVEKNFGAMKVMLLGDGEVEPNTDQILQLATEICKEGVIVLFVHKLSILGWEARKDLV
                     QFWSILLKQKVGSTHCCVQFLEKHSDLLDFLVAGYDNKEIALNCGNMLRECIKFPTLA
                     KYMLESPSFELFFKYVELANFDVASDAFSTFKDLLTKHPVAVSEFLTSHYDEFFEQYR
                     KLLTSANYVTRRQSLKLLSEFLLEPPSSHIMKKYIAEVQHIKVMMTLLTDSSKNIQIS
                     AFHIFKIFVANPNKTREIKVILAKNHERLLDLLNNLSAGKGGDDDQFEEEKELIIKEI
                     EKVSQLPNLDS"
     misc_feature    174..1130
                     /gene="LOC139839655"
                     /note="Mo25-like; Region: Mo25; pfam08569"
                     /db_xref="CDD:462522"
ORIGIN      
        1 cacttataat tatcatatca tatgatcata tgattatgat cgtaattcat atgaaaacga
       61 ttattacaca ttttttccgc aatatatcaa aatccaccta ttaatttctt cattccttcc
      121 attgattaat tgcttgattg atcatcaatt gtaagcaaac gatgtcgttt tcgttcttca
      181 aggccttaag gcctaaaacc ccacaagaac tcgctaaagc aatcaaagac tccctcatgg
      241 ctcttgatac caaaactgtt gttgaggtta aatcactcga aaaggcgtta gaagaagttg
      301 agaagaattt tggcgcgatg aaggttatgc ttttaggaga tggggaagtt gaaccaaaca
      361 cggatcaaat tttgcaattg gcgacggaaa tatgtaaaga gggtgtaatt gttcttttcg
      421 ttcacaagtt atcgatactt gggtgggagg caagaaaaga tttagtccaa ttttggtcca
      481 tattattgaa gcaaaaagtt ggatcaacgc attgttgtgt tcaattcttg gagaaacatt
      541 cagacttatt agattttctg gttgcaggtt atgataacaa ggagattgcc ttaaattgcg
      601 gaaacatgtt gagggaatgc atcaagtttc caactttggc aaaatatatg ttggagtctc
      661 caagctttga acttttcttc aaatatgtgg aacttgcaaa ttttgatgtt gcttctgatg
      721 cattctccac ttttaaggat ttgcttacca aacatccagt tgcagtatct gaattcctaa
      781 cttcacatta tgatgagttc tttgagcagt acaggaaact tctaacttct gccaactatg
      841 taacaagaag gcagtctttg aagcttttat ctgagtttct tttggagcct ccaagttccc
      901 atataatgaa aaaatatatt gcagaagttc agcacattaa agtcatgatg acattgctta
      961 cggattcaag caaaaacatt cagatatctg cattccacat atttaagata tttgtggcta
     1021 atcctaataa gactcgagaa attaaagtta tattggcaaa gaaccatgaa agattgctgg
     1081 atttattaaa caatttgtct gctggaaaag gtggtgacga tgatcaattt gaagaagaaa
     1141 aggaacttat catcaaagaa atagaaaaag tatctcaact cccaaatctt gattcctagg
     1201 taaatatttt aattttttgt ttcatctacg caaaagcaag attgcaatcg acagaagtca
     1261 agtttacaat caaccctta
//
LOCUS       XM_071829784            1900 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-glycosyltransferase
            85C1-like (LOC139839656), mRNA.
ACCESSION   XM_071829784
VERSION     XM_071829784.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1900
                     /gene="LOC139839656"
                     /note="UDP-glycosyltransferase 85C1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139839656"
     CDS             19..1461
                     /gene="LOC139839656"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1087..1089,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: UDP-glycosyltransferase
                     85C1-like"
                     /protein_id="XP_071685885.1"
                     /db_xref="GeneID:139839656"
                     /translation="MDAVAINNEKKPHVVFIPFPAQSHIKCMLKLAKLLHHKGFHITF
                     ISTQSNHNRLAKSGATHLLNGTPGFDFVTVSGGQADDGVEHIPTLVEIWVHLATNFYN
                     LFLDLVSGLETPVTCIICDGFMTYTNMIDAAEKLKVPIILFWTMAACGFMGTYQVKVL
                     TDIGILPLKEESYLTNGYLDMKIGWIPGMEHIRLKDLSEMALTADPNHLELKYLLQTA
                     QAADKVSHMILHTFNELETSLVEEIRTIVPNVYTVGPLELLLNRIPEKETTFSGYSLW
                     REEPECVKWLQSKEPNSVVYVNFGSIAVMSSQDLVELGWGLVNSNHEFLWIIRNDLVD
                     GKPSVLAKELEEAINEKGFVGSXCSQEEVLNHPSVGGFLTHGGWGSIIESLSAGVPMI
                     CCPFSGDQVTNCRQMCKEWEVGMEMGKNVKRDEVEKLVRMLMDEEEGGRMRKKALEWK
                     KKAEITTEFNGSSSLDTEKLANEITKLSRN"
     misc_feature    52..1377
                     /gene="LOC139839656"
                     /note="UDP-glycosyltransferases and similar proteins;
                     Region: GT1_Gtf-like; cd03784"
                     /db_xref="CDD:340817"
     misc_feature    order(85..90,94..96,586..588,595..600,610..612,739..741,
                     919..921,1141..1143,1147..1149,1153..1158,1165..1167)
                     /gene="LOC139839656"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(85..87,919..921,1141..1143,1147..1149,1153..1158)
                     /gene="LOC139839656"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    88..90
                     /gene="LOC139839656"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 aaaaaaaaaa ctcaaaaaat ggatgcagta gccataaaca atgaaaagaa gcctcatgtg
       61 gtgttcatac catttccagc acaaagccat atcaagtgta tgctcaaact agccaaacta
      121 ttgcaccaca aaggcttcca tataaccttt atcagcaccc aatccaacca taaccgactc
      181 gctaagtctg gtgcgaccca tttgctaaac ggtactcctg gttttgattt tgtaacggtt
      241 tctggtggtc aagcggatga cggtgtcgaa catattccaa ctttagttga aatctgggtc
      301 caccttgcaa cgaactttta caatttattt cttgatcttg tttctgggct cgaaactcca
      361 gtgacttgta ttatttgtga tgggtttatg acatacacca acatgattga tgctgctgag
      421 aagcttaagg ttccaatcat ccttttttgg accatggctg cttgcggttt tatgggaact
      481 taccaagtga aagttcttac ggacatagga atcttaccac ttaaagaaga aagttacttg
      541 acaaatggtt atcttgatat gaagatcggt tggattcctg gaatggaaca tatccgtttg
      601 aaagatctat ctgagatggc gttgactgca gacccgaatc acctcgaact taaatacttg
      661 ttgcaaactg ctcaggcagc tgataaagtt tcacatatga tcctccatac atttaatgaa
      721 ctagaaacta gtcttgtcga agagattaga accattgttc caaacgttta cacagtcgga
      781 ccactagaat tacttttgaa tcgtattcct gaaaaagaaa caacttttag tggttatagt
      841 ctttggaggg aagaaccaga gtgtgtcaag tggctccaat cgaaagagcc gaattcggtg
      901 gtgtatgtca actttggaag catagcagta atgtcctcgc aagatcttgt agaacttggt
      961 tggggacttg ttaacagcaa ccatgaattt ttatggatta taagaaatga tttggttgat
     1021 ggtaagccta gtgttttagc taaagaatta gaggaagcga taaacgagaa aggatttgtt
     1081 ggaagttagt gttcacaaga agaggtgttg aaccaccctt cagttggcgg gttcttgact
     1141 catggtgggt ggggctcgat cattgagagc ttgtcggccg gcgtaccaat gatttgttgc
     1201 ccattttcgg gtgatcaagt aactaattgc agacaaatgt gtaaagaatg ggaggttggt
     1261 atggagatgg ggaagaatgt aaagagggat gaagtcgaga agcttgtaag gatgttaatg
     1321 gacgaagagg aaggtggaag aatgagaaag aaagctttag agtggaagaa aaaggcggaa
     1381 atcactactg aatttaatgg gtcatcttct ttggatacag agaaacttgc taatgaaatt
     1441 accaagttat caagaaacta aaatctcatt ttgtaacatt gtaccttaat aatcacatca
     1501 aagaaagtat gttacccgaa caaattcata aaatttaaag aagacaaatt cataaaattt
     1561 tgtaacattg tacctaaata atcacatcaa agaagacaaa ccatttggac tcgtcgcaat
     1621 ttccatcatt ttattctact ccttagcttt gttcctcatt cggttacctt tttctccaca
     1681 ttttctattt ggttcagagt aacagccaat ggtccggcca tgtagacatt ttggaacatg
     1741 ggctcaattg ctttgatgaa attcgactct aatgcatcga atgtgtggat gattatacat
     1801 gaaagcttgc gagtcggctt aagaaactta aggaaaattc tgcggctgat tcaatcagtc
     1861 ttagctcgtt catgctccag gagcaccgac cgagcaccct
//
LOCUS       XM_071829785            1247 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor IIE subunit beta-like (LOC139839657), transcript variant X1,
            mRNA.
ACCESSION   XM_071829785
VERSION     XM_071829785.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1247
                     /gene="LOC139839657"
                     /note="transcription initiation factor IIE subunit
                     beta-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139839657"
     CDS             138..1001
                     /gene="LOC139839657"
                     /codon_start=1
                     /product="transcription initiation factor IIE subunit
                     beta-like isoform X1"
                     /protein_id="XP_071685886.1"
                     /db_xref="GeneID:139839657"
                     /translation="MGSLQESLNRFKKQQEKCQSTLKSIAGSQKSHKSTTTANPAPRV
                     APPSNFTKTTVPAVKFSNDTERLQHINNIRKSPVGAQIKRVIDLLFESRQSFTAEQIN
                     EACYVDVKGNKAVFESLAKNPKVNYEGKCFSYKSKHNVRDQKELLRLIRTFAEGIAVA
                     DLKDAYPTVMDDLQALKAARQIWLLSNFDSQEDIAYPNDPRVPIKVDDELKQLFRAIE
                     LPRDMLDIERDLQKNGMKPATNTARRRVMAQNGNVSSKPKLKKKKKTEISKRTKLTNA
                     HLPELFKNLTG"
     misc_feature    138..989
                     /gene="LOC139839657"
                     /note="TFIIE_beta_winged_helix domain, located at the
                     central core region of TFIIE beta, with double-stranded
                     DNA binding activity; Region: TFIIE_beta_winged_helix;
                     cl02153"
                     /db_xref="CDD:470477"
ORIGIN      
        1 ggacataaca tgtacacaaa cctaacccgc aattgcgttt aatatcgcaa tacaacctac
       61 aaatttccca atccttcatc ggatcaatta tcgccaaacc ctaattttta gatctacaga
      121 agtgaagtgg tgtaagaatg ggatcattgc aagagagttt gaataggttc aagaagcaac
      181 aagagaaatg tcagtctact cttaagagca ttgcaggttc gcaaaaaagc cataaatcga
      241 caacaacagc aaaccctgca cctagagttg cacctcctag caacttcact aaaacgactg
      301 ttcctgcggt gaagttttcg aacgacacag agaggttgca acatattaat aatataagga
      361 agagccctgt tggagctcag atcaaacgag taattgatct actgtttgag tcaaggcaat
      421 cctttacagc tgagcaaata aatgaagctt gttatgttga tgtcaaaggc aacaaggctg
      481 tgtttgagag tttggcgaag aacccaaaag tgaattatga gggaaaatgc ttctcttaca
      541 agtccaagca taatgtgaga gaccagaaag aacttttacg tttaataaga acatttgccg
      601 agggtattgc tgttgctgat cttaaagatg cctacccaac tgtcatggat gatttacagg
      661 ctctgaaagc tgctagacaa atctggcttc tgtcaaattt cgactcgcag gaagacatag
      721 catacccaaa tgatcctaga gtccctatca aggttgatga tgaattgaaa caactattta
      781 gggcaattga attgccacga gacatgttgg atattgagcg ggacctacaa aagaacggta
      841 tgaagcctgc tacgaacact gctaggagga gagtaatggc tcagaacggt aatgtatcga
      901 gtaaaccaaa actgaagaaa aagaagaaga ctgagatcag taaaaggaca aaactcacca
      961 atgctcatct tcctgaactg ttcaaaaatt taactggcta gttgcaccac tattgacttc
     1021 agttggtgtg tatggataac caagactacg ataaagatta tatgatcata tatgttggat
     1081 attttgtatt tcatgccttc tatctttact gatagatatt agtgaaacct attttgaatt
     1141 acaaatgccg tgcatgtata actgtgagtt gagaattaaa tcagattgag actgaaatgt
     1201 ctaaagttat ctaagctgtt ggcttcgggt atgtttatat atatttt
//
LOCUS       XM_071829786            1238 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor IIE subunit beta-like (LOC139839657), transcript variant X2,
            mRNA.
ACCESSION   XM_071829786
VERSION     XM_071829786.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1238
                     /gene="LOC139839657"
                     /note="transcription initiation factor IIE subunit
                     beta-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139839657"
     CDS             129..992
                     /gene="LOC139839657"
                     /codon_start=1
                     /product="transcription initiation factor IIE subunit
                     beta-like isoform X1"
                     /protein_id="XP_071685887.1"
                     /db_xref="GeneID:139839657"
                     /translation="MGSLQESLNRFKKQQEKCQSTLKSIAGSQKSHKSTTTANPAPRV
                     APPSNFTKTTVPAVKFSNDTERLQHINNIRKSPVGAQIKRVIDLLFESRQSFTAEQIN
                     EACYVDVKGNKAVFESLAKNPKVNYEGKCFSYKSKHNVRDQKELLRLIRTFAEGIAVA
                     DLKDAYPTVMDDLQALKAARQIWLLSNFDSQEDIAYPNDPRVPIKVDDELKQLFRAIE
                     LPRDMLDIERDLQKNGMKPATNTARRRVMAQNGNVSSKPKLKKKKKTEISKRTKLTNA
                     HLPELFKNLTG"
     misc_feature    129..980
                     /gene="LOC139839657"
                     /note="TFIIE_beta_winged_helix domain, located at the
                     central core region of TFIIE beta, with double-stranded
                     DNA binding activity; Region: TFIIE_beta_winged_helix;
                     cl02153"
                     /db_xref="CDD:470477"
ORIGIN      
        1 aacatgtaca caaacctaac ccgcaattgc gtttaatatc gcaatacaac ctacaaattt
       61 cccaatcctt catcggatca attatcgcca aaccctaatt tttagatcta cagtgaagtg
      121 gtgtaagaat gggatcattg caagagagtt tgaataggtt caagaagcaa caagagaaat
      181 gtcagtctac tcttaagagc attgcaggtt cgcaaaaaag ccataaatcg acaacaacag
      241 caaaccctgc acctagagtt gcacctccta gcaacttcac taaaacgact gttcctgcgg
      301 tgaagttttc gaacgacaca gagaggttgc aacatattaa taatataagg aagagccctg
      361 ttggagctca gatcaaacga gtaattgatc tactgtttga gtcaaggcaa tcctttacag
      421 ctgagcaaat aaatgaagct tgttatgttg atgtcaaagg caacaaggct gtgtttgaga
      481 gtttggcgaa gaacccaaaa gtgaattatg agggaaaatg cttctcttac aagtccaagc
      541 ataatgtgag agaccagaaa gaacttttac gtttaataag aacatttgcc gagggtattg
      601 ctgttgctga tcttaaagat gcctacccaa ctgtcatgga tgatttacag gctctgaaag
      661 ctgctagaca aatctggctt ctgtcaaatt tcgactcgca ggaagacata gcatacccaa
      721 atgatcctag agtccctatc aaggttgatg atgaattgaa acaactattt agggcaattg
      781 aattgccacg agacatgttg gatattgagc gggacctaca aaagaacggt atgaagcctg
      841 ctacgaacac tgctaggagg agagtaatgg ctcagaacgg taatgtatcg agtaaaccaa
      901 aactgaagaa aaagaagaag actgagatca gtaaaaggac aaaactcacc aatgctcatc
      961 ttcctgaact gttcaaaaat ttaactggct agttgcacca ctattgactt cagttggtgt
     1021 gtatggataa ccaagactac gataaagatt atatgatcat atatgttgga tattttgtat
     1081 ttcatgcctt ctatctttac tgatagatat tagtgaaacc tattttgaat tacaaatgcc
     1141 gtgcatgtat aactgtgagt tgagaattaa atcagattga gactgaaatg tctaaagtta
     1201 tctaagctgt tggcttcggg tatgtttata tatatttt
//
LOCUS       XM_071829787            1197 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor IIE subunit beta-like (LOC139839657), transcript variant X3,
            mRNA.
ACCESSION   XM_071829787
VERSION     XM_071829787.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1197
                     /gene="LOC139839657"
                     /note="transcription initiation factor IIE subunit
                     beta-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon."
                     /db_xref="GeneID:139839657"
     CDS             138..950
                     /gene="LOC139839657"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685888.1"
                     /db_xref="GeneID:139839657"
                     /translation="MGSLQESLNRFKKQQEKCQSTLKSIAGSQKSHKSTTTANPAPRV
                     APPSNFTKTTVPAVKFSNDTERLQHINNIRKSPVGAQIKRVIDLLFESRQSFTAEQIN
                     EACYVDVKGNKAVFESLAKNPKVNYEGKCFSYKSKHNVRDQKELLRLIRTFAEGIAVA
                     DLKDAYPTVMDDLQEDIAYPNDPRVPIKVDDELKQLFRAIELPRDMLDIERDLQKNGM
                     KPATNTARRRVMAQNGNVSSKPKLKKKKKTEISKRTKLTNAHLPELFKNLTG"
     misc_feature    138..938
                     /gene="LOC139839657"
                     /note="TFIIE_beta_winged_helix domain, located at the
                     central core region of TFIIE beta, with double-stranded
                     DNA binding activity; Region: TFIIE_beta_winged_helix;
                     cl02153"
                     /db_xref="CDD:470477"
ORIGIN      
        1 ggacataaca tgtacacaaa cctaacccgc aattgcgttt aatatcgcaa tacaacctac
       61 aaatttccca atccttcatc ggatcaatta tcgccaaacc ctaattttta gatctacaga
      121 agtgaagtgg tgtaagaatg ggatcattgc aagagagttt gaataggttc aagaagcaac
      181 aagagaaatg tcagtctact cttaagagca ttgcaggttc gcaaaaaagc cataaatcga
      241 caacaacagc aaaccctgca cctagagttg cacctcctag caacttcact aaaacgactg
      301 ttcctgcggt gaagttttcg aacgacacag agaggttgca acatattaat aatataagga
      361 agagccctgt tggagctcag atcaaacgag taattgatct actgtttgag tcaaggcaat
      421 cctttacagc tgagcaaata aatgaagctt gttatgttga tgtcaaaggc aacaaggctg
      481 tgtttgagag tttggcgaag aacccaaaag tgaattatga gggaaaatgc ttctcttaca
      541 agtccaagca taatgtgaga gaccagaaag aacttttacg tttaataaga acatttgccg
      601 agggtattgc tgttgctgat cttaaagatg cctacccaac tgtcatggat gatttacagg
      661 aagacatagc atacccaaat gatcctagag tccctatcaa ggttgatgat gaattgaaac
      721 aactatttag ggcaattgaa ttgccacgag acatgttgga tattgagcgg gacctacaaa
      781 agaacggtat gaagcctgct acgaacactg ctaggaggag agtaatggct cagaacggta
      841 atgtatcgag taaaccaaaa ctgaagaaaa agaagaagac tgagatcagt aaaaggacaa
      901 aactcaccaa tgctcatctt cctgaactgt tcaaaaattt aactggctag ttgcaccact
      961 attgacttca gttggtgtgt atggataacc aagactacga taaagattat atgatcatat
     1021 atgttggata ttttgtattt catgccttct atctttactg atagatatta gtgaaaccta
     1081 ttttgaatta caaatgccgt gcatgtataa ctgtgagttg agaattaaat cagattgaga
     1141 ctgaaatgtc taaagttatc taagctgttg gcttcgggta tgtttatata tattttt
//
LOCUS       XM_071829788            1352 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides galactinol synthase 2-like
            (LOC139839658), mRNA.
ACCESSION   XM_071829788
VERSION     XM_071829788.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1352
                     /gene="LOC139839658"
                     /note="galactinol synthase 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 50
                     Proteins"
                     /db_xref="GeneID:139839658"
     CDS             113..1111
                     /gene="LOC139839658"
                     /codon_start=1
                     /product="galactinol synthase 2-like"
                     /protein_id="XP_071685889.1"
                     /db_xref="GeneID:139839658"
                     /translation="MAPVARNNISNRTNPGLVKAKTLPRRAYVTFLAGSGDYWKGVVA
                     LAKGLRKAKSVYPLVVAMLPDVPMEHRQKLISQGCIIREIEPLNPPENQTQFAMAYYV
                     INYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGNFYAVMDCFCEHNWRNSPQ
                     YQIGYCQQTPDKVQWPEHELGPKPPLYFNAGMFVFEPNLSTYYELLESVKTTPPTLFA
                     EQDFLNMFFKDRYKPLPTEYNLILAMLWRHPENFDLEKVKVVHYCADGSKPWRYTGKE
                     KNMDREDIKKLVKKWWDIYNDETLDYWRICGLTMAGELTPAVTKRGRRYVTAPSAA"
     misc_feature    113..1108
                     /gene="LOC139839658"
                     /note="galactinol synthase; Region: PLN00176"
                     /db_xref="CDD:215090"
     misc_feature    order(419..424,431..433,473..475,479..487,554..556,
                     677..685,767..772,836..841,893..895,899..904,914..916)
                     /gene="LOC139839658"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133018"
     misc_feature    order(479..481,485..487,893..895)
                     /gene="LOC139839658"
                     /note="Manganese binding site [active]"
                     /db_xref="CDD:133018"
     misc_feature    order(551..556,770..772,809..811,815..820,830..832,
                     842..844)
                     /gene="LOC139839658"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133018"
ORIGIN      
        1 tcacatacac acttcatcat taatcctctc gacaaacaaa aaacacaaat tacttcgatc
       61 acactgtcac aattcacttg ataatattat aacacaccac tgtactaaaa ccatggctcc
      121 agttgctaga aataatattt cgaaccgaac caatcccggt ctagtcaagg ccaaaacgtt
      181 gcctagacgt gcctatgtca cgttcttggc cggaagtggt gactactgga aaggtgtggt
      241 tgcactagct aaaggtcttc gtaaggctaa atcggtctac ccactcgttg ttgctatgct
      301 tcctgacgtt ccaatggaac atcgtcagaa attgatctcc caaggatgca tcatccggga
      361 gatcgaaccc ttaaacccac ccgaaaacca aacccaattc gccatggctt attacgtcat
      421 caattattcc aaacttcgaa tatgggagtt tgtggagtat agcaagatga tatatctaga
      481 tggagacata caagtattcg acaacattga ccatctattt gatttgcccg atggcaattt
      541 ctacgcagtt atggactgtt tctgcgagca taactggaga aacagtcccc aataccaaat
      601 cgggtactgt caacagacac ccgataaggt acaatggcca gagcatgaac tcgggccaaa
      661 acccccactt tacttcaacg cgggaatgtt cgtgttcgaa cccaatcttt cgacctacta
      721 cgagcttttg gagtccgtaa aaacgacgcc accaacttta tttgcggaac aagatttctt
      781 aaacatgttt tttaaggaca gatacaagcc tcttccgaca gagtacaact taatcttggc
      841 tatgttatgg cgccacccgg agaactttga tcttgaaaaa gtcaaagttg tgcattattg
      901 cgccgatggg tcgaaaccat ggcggtacac cggaaaagaa aagaatatgg atcgtgaaga
      961 tattaagaag ttagtgaaaa aatggtggga tatttataac gatgagacgt tggattattg
     1021 gagaatatgt ggactaacga tggccggaga gttgacgccg gcggtaacta agaggggtag
     1081 gcgttatgta acggcaccgt cggcagctta attagtcgtt gatggtgttt gtaaaagtat
     1141 actccgtaat atttaaagac atacgtagta cagtatattt tacggttaat gtttcttaac
     1201 ctaatagtga gcagttaaga acattattag caagtattat tagttagtaa gagaaatagc
     1261 tgggatgaga tattttattt tattttcttt tatcttggta ttaagaatta agttttatat
     1321 agttctggtt tttgggattg taagtatttc ct
//
LOCUS       XM_071829789            5820 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIME FOR COFFEE
            (LOC139839659), transcript variant X1, mRNA.
ACCESSION   XM_071829789
VERSION     XM_071829789.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5820
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5820
                     /gene="LOC139839659"
                     /note="protein TIME FOR COFFEE; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139839659"
     CDS             314..5356
                     /gene="LOC139839659"
                     /codon_start=1
                     /product="protein TIME FOR COFFEE isoform X1"
                     /protein_id="XP_071685890.1"
                     /db_xref="GeneID:139839659"
                     /translation="MDRNREARRAAATNNNHNHHMAAPPNGLSSSSSRRRHRSNSLRD
                     SPDEDGGVELHEQQQQQGRLRERERERGVVKKDRDRERERASRSKRRRENRMMMMTSH
                     NSNRDTEIDDTSEESVNDEEEEEDDDGGNGLQRMLPPPSSNPVASGTVVSTNHHSLHS
                     QQQLHHRKTFPPAANKVIRAAAPPPAWKAADEMIGVSVPRKARSASTKRSHEWVSGSG
                     VVGGGASTEQNHRQSSASPVHLASATASPVPAAPPSPSSSSVSVRKKMKANGGGSKPR
                     PPKSSSKSSSSNPEELEIEIAEVLYGLMTQSQAPSKKEITPSNDNKSTNDNSKSRVSS
                     PISNSTVIPKNSTSLSTVAPKRKKPRQVSENTFGVRNNPVKTEVDQHNQQHHHHHQSP
                     KTDSSGSAAVPPVAAENGGSFGFTSLPGQQPSSTPSSALPQAVAANESKCDVGVVLTK
                     QEVEKEASAVGKSKFTDGVTTTTASVTTTTLKTANLEAESQKEEKFEIDLMAPPPQQR
                     TSQESDGDIDFSDRKQIATQELNKIKEDEKLVKCGKLETLSLTEELKNSKAESLKQSM
                     NEQLHIDLEKPNKDSANLVSCSSNKSLHQALKHQQLSAKPETHSEKTAQPSSMQIPMS
                     VANWPPMGYVAPLQGVISMDGNPMPSAAPIQPIFTQPRPKRCATHCYIARNIHYLQQF
                     MKINPFWPAASAPAPIFGGKPHNVNVMPSTELHGNIPQSLQDKSPGLNIFPGHAAAKE
                     NKSSQPTTVPDPAQRKQQVLLQQAMPPVTPNNILHGPAFIFPFNQQQAVAASASVRPG
                     SSKLNSTSAAGGLVGPSGAVANTATVSTSTSAAAPALSFNYPNMSANETQYLAILQNN
                     PYTFPIPAAVGAPPNYRGNPHAQAMPLFNGSFYSSQMIHPSQIPQTSQQAPPAQSLNH
                     HPSQSQQVSQTHQNSSGSTSSSQKHLQAQQRQQQQQQGGSAAVNGSGSGNGASLHNNY
                     PAAHKNRSNQPSQHLNPPLQARHLENEVTGGEDSPSTADSRASRAANTMSVYGHNFAM
                     PVHSHNFALMNPQTAMSNTAVSGNSNDKKQQHQQSQQQGLKRGGAESSLPQTFAMSFA
                     PMNGSTGAMAQNHAAMFQNLPESLRQTYHHMMTAPASAASSHHSQQKKESRGTEDASR
                     TAGHEFSNVDEDRKGSAGLTAKSGHSIAFSRPDLAKDASVSSPAVSSTSVIDSSLRTN
                     INLGANNRSTPRSVISNSVAAPQSNHQLNTQLQQQHHQHQQQVLQLQKQQQQQHQQQQ
                     QHQHHQLNARSKNPPSSNGGVYPDHLVTSSSSNANANKFPSSLSSFPLQTSNASSSPV
                     QSPQWRNSVRGPATSQVPSSLATSTTSSLKNLHQSPHQTQQQQQSGRPHQQSHTQISF
                     GAASQKLPSTTSSSTSHVQQQSQNQNQNQNPGSNSNNNQSPSPPMLVGSPTTSSMSKG
                     GGGSPRMNAAGSASTSGRPGQISSLSSSSQQPKNSPVGTQRPSPSILGNPHNSNSAKS
                     QQQQQQQHLQQQVPKQVFQQHQAQAQAQAQAQAQAHMFFTHPYMQVQQAQAQAQAQAQ
                     AQAQQHSGSPNTAAGYYAPRKQHSSQLQNHQTSTEMLSLCPPVTLANTTTSDPAKAIA
                     AATSNLKGGGGVGLGSQQGILNAAPYGSGPQSSMPAGFPQYAPAAVQVKPVEQKQPAG
                     NDNLRTWQPEKK"
ORIGIN      
        1 aaaataagga agagagagaa aagagaaagt taagaagata gaaagagatc tgagagagtg
       61 tgattcataa aaaaaaaaaa tcatcaatca acctcttcaa ttcaatttaa gaataataat
      121 atttcaattt catttcattt gtgtatctat ctatatctat atctatctat ctctcggttg
      181 ataatttaga aattcgccgg agtagctgtt ttgttgtagt aaattaggtt tccggtaagt
      241 tatgtgatga tagatacaag agtattagta gatctgagat tattatatct atatctatat
      301 ttatcaatta taaatggata gaaatcgaga agcaagacga gcagcagcta ctaataataa
      361 tcataatcat catatggccg ctccaccaaa cggattatca tcttcatcat ctagacgaag
      421 acatcgtagt aatagtctac gtgattcacc tgatgaggat ggaggtgtgg agttacatga
      481 acaacaacag caacagggta ggttaagaga acgagaacgg gagcggggcg tggttaaaaa
      541 agatcgagat cgagaacggg agagagcgag taggagtaaa aggaggagag aaaataggat
      601 gatgatgatg actagtcata atagtaatag agatacagaa attgatgata catctgaaga
      661 aagtgtaaat gatgaagaag aagaagaaga tgatgatggt ggaaatggtt tacagcggat
      721 gttaccacca ccgtcgtcga atccggtagc ttcaggaaca gttgtgtcta ctaatcatca
      781 tagtttacat tctcaacagc aacttcatca tcggaaaact tttcctccgg cggctaataa
      841 agttattaga gcggctgcgc cgccgccggc gtggaaagct gccgatgaga tgattggtgt
      901 ttctgttcca agaaaagctc ggtcagcatc tacaaagagg tcacatgaat gggtttctgg
      961 tagtggtgtg gttggtggag gtgcaagtac agagcaaaat caccggcaat catcagcgtc
     1021 accggtgcat ctagcttcag caactgcctc accggtgccg gcggctccgc catctccttc
     1081 ttcttcaagt gtttcagtca gaaagaagat gaaagcaaat ggaggggggt caaaaccaag
     1141 gccaccaaaa tcatcatcaa agtcatcatc ttcaaatcca gaagagcttg aaatagagat
     1201 agcagaggtt ttatatggtc ttatgacaca atcacaagca ccatctaaga aagaaatcac
     1261 accatcaaat gataacaaat caactaatga taacagcaaa tctagagttt catctccgat
     1321 ctcaaactct acagtcatac ctaaaaattc aacgtctttg tcaacagtag caccaaagag
     1381 gaagaaacca aggcaagtgt cagagaatac ttttggtgta cgaaacaatc cggtcaaaac
     1441 tgaggttgat caacataatc agcaacatca tcatcatcat cagtctccca agactgatag
     1501 ctcaggatct gctgctgttc ctcctgttgc agctgagaat ggtggctctt ttggattcac
     1561 tagtttgcca ggtcagcagc cttcatcgac gccatcttcg gcgttaccac aggcggtggc
     1621 ggctaatgag agtaaatgtg atgtgggtgt cgtgttgacc aaacaagagg ttgagaagga
     1681 ggcttctgct gttggtaaaa gtaaatttac cgatggcgtg acaacaacca ctgcatcggt
     1741 gacaacgact accctgaaaa cagcaaattt ggaggccgaa agtcaaaagg aagaaaaatt
     1801 tgaaatagat ctgatggcac cacctcctca acagagaact tcgcaagaaa gtgatggcga
     1861 tatcgatttt tcggatcgga aacagattgc aactcaggaa ttgaacaaga ttaaggaaga
     1921 tgagaaactt gtgaaatgtg gcaagttaga aactttgagt ttgactgagg agctcaagaa
     1981 ttcaaaggca gaatcattaa agcaatctat gaatgaacaa cttcatattg atttggaaaa
     2041 accgaataag gacagtgcca acttggtaag ttgtagcagc aacaaatcac ttcatcaagc
     2101 tcttaagcat cagcaattat cagctaaacc tgaaactcac tctgaaaaga cagctcagcc
     2161 gagttctatg caaattccaa tgtctgtggc taattggcct ccaatggggt atgtggcacc
     2221 attgcaggga gtcatatcaa tggatggcaa cccaatgcct tcagcagcac ccattcagcc
     2281 aatatttaca cagccaagac caaaaaggtg cgccacacat tgctacattg caaggaacat
     2341 tcactatctt caacaattca tgaagataaa cccattttgg ccagctgcat ctgcccctgc
     2401 gccaatattt gggggcaagc ctcacaatgt aaatgtcatg ccttctaccg aattacatgg
     2461 aaacattcca cagtctttgc aagacaaatc acccggactc aatatcttcc ctggtcatgc
     2521 agctgctaaa gaaaacaagt cgtctcaacc cacaaccgtt ccagaccctg cccaaagaaa
     2581 gcaacaggtt ttgcttcaac aagcaatgcc acctgtcact cccaacaata tactacatgg
     2641 gcctgctttc atctttcctt tcaaccagca acaagcagtg gcagcttctg cttctgttag
     2701 acccggatct tcaaagctta atagtactag tgccgcaggt ggtttggttg gtccttcagg
     2761 tgctgtagca aatacagcta cagttagtac atccacttca gcggctgctc ctgcgttgag
     2821 cttcaattat cccaatatga gcgccaacga aacacaatac ctggcaattt tgcagaacaa
     2881 tccatacaca ttcccaatac ctgcagcagt tggagcccca ccgaattata gaggcaaccc
     2941 tcatgcacaa gccatgcctc ttttcaacgg ctctttctac tcatctcaga tgatccaccc
     3001 gtctcaaatc ccacaaacgt cccaacaagc cccacctgct caatctctga atcatcaccc
     3061 ttcgcagtct caacaagtct cacaaactca tcagaacagt agtggctcta cctcatcttc
     3121 acaaaagcac ttgcaagctc agcagcggca gcaacagcag caacaaggcg gtagtgcggc
     3181 ggttaacggt agtgggagtg gaaatggtgc aagtttacat aataactatc ctgctgccca
     3241 taaaaacaga tcaaatcaac cttcccagca cctgaaccca ccactacaag ctcgccatct
     3301 tgaaaatgaa gtgactggtg gcgaggatag cccatcgact gccgacagta gagcctctcg
     3361 ggctgcaaac actatgagtg tttatggaca taattttgct atgcccgttc attcccataa
     3421 ctttgctctc atgaaccctc aaactgcaat gtcaaatact gctgttagtg gcaactcgaa
     3481 tgacaagaaa cagcagcatc agcaatcgca gcaacaaggg ttaaaaaggg gtggtgccga
     3541 gtcatctttg ccacaaactt ttgcgatgtc ttttgctccc atgaatggta gtactggtgc
     3601 catggctcaa aaccatgcag ccatgtttca aaacttaccg gaatcattaa ggcaaactta
     3661 tcaccatatg atgacggcgc ctgcatcagc agcatcgagt caccattctc aacaaaagaa
     3721 ggaatctaga ggaaccgaag atgcttctcg aaccgcaggt catgagtttt cgaatgttga
     3781 tgaggataga aagggcagtg cagggttgac cgctaaatcc ggtcactcca ttgctttttc
     3841 aagaccagac cttgccaaag atgcctctgt gtcatcaccg gctgtctcta gtacctctgt
     3901 gattgatagt tctttgagga ctaatatcaa tcttggcgca aataaccgat cgactcctcg
     3961 atcggttatt tcaaattctg ttgcagctcc tcaatctaat catcagttaa acactcaatt
     4021 acagcagcaa catcatcaac atcagcagca agtccttcag cttcaaaagc aacaacagca
     4081 acaacatcaa caacaacaac agcatcaaca tcaccaattg aatgctagga gtaaaaatcc
     4141 accatcaagc aatggaggtg tgtacccaga tcatcttgta acttcatcat cttcaaatgc
     4201 taatgctaat aagttcccga gttccttatc ttcatttcca cttcaaacaa gcaatgctag
     4261 tagtagcccg gttcaatctc ctcagtggag aaactcggtt aggggtcccg ctacctccca
     4321 agttccatca tcacttgcta cgtcaaccac atcatctctc aagaatcttc accaatcccc
     4381 ccaccaaacc cagcaacaac agcagtcagg tagaccccac caacaatcgc atacacagat
     4441 ttcgtttggt gcagcaagtc agaaacttcc ttccacaaca tcatcatcaa catcacacgt
     4501 gcaacaacag tctcagaatc aaaatcaaaa tcaaaatcca ggaagcaata gtaataataa
     4561 ccagagtcca tctccgccaa tgttggttgg ttctcctacg acatcttcga tgtccaaagg
     4621 cggtggcgga agccccagaa tgaatgctgc tggatcagca tcgacaagtg gtagacctgg
     4681 tcagatttct tctttgtcat cgtcgtctca acaacctaaa aactcccccg taggaaccca
     4741 gagaccttca ccttccattc ttggtaatcc tcacaactca aattctgcca agtctcaaca
     4801 gcagcaacag caacaacatc tacaacaaca ggtgccaaaa caagtgtttc agcaacacca
     4861 agcccaagcc caagcccaag cccaagccca agcccaagcc catatgttct ttacacatcc
     4921 ttacatgcaa gttcaacagg ctcaggctca ggctcaggct caggctcagg ctcaggctca
     4981 acaacattca ggcagcccaa atacagcggc agggtattat gctcctagaa agcagcactc
     5041 atcacagctg cagaatcatc aaacatcaac agaaatgctg tcgctctgtc cacctgtgac
     5101 gttagcaaat accaccacat cggatcctgc aaaagcaata gcagcagcta ctagtaattt
     5161 aaaaggtggt ggtggtgtag ggttggggtc acagcaaggg attttaaatg cagctccata
     5221 tggttctgga ccacagtctt ccatgcctgc tggcttcccc cagtatgccc ctgctgcagt
     5281 tcaggtcaaa cccgttgagc aaaaacaacc agctggaaat gacaatttgc gtacgtggca
     5341 gcctgagaag aagtaaaagt catatatgct ggcaagccga gctgtgttgt gctggtataa
     5401 tcagcccgag ccgggatgca gatgagccag acaagtgttt tggatcaaag tttttgatgg
     5461 gttggggcta aaattctcca aggagctttg aagttgtgat ataattgggg gcacgaatca
     5521 ttttgtaaag ggaagggagg gcctgtctgt ttggtggata aagaagtttg gtgcttcttt
     5581 gtgttttagg tgatagtctt ttttttgtgg ggggttttct ttttgttgaa tgatctccct
     5641 tgttgaaaga taagatgaag tttcaaatga aaatatatct agttggacat ataattatat
     5701 atttactaat atgaaacaga aatgggaggg tgtgcatgtt tagcatatat atttatattt
     5761 tatatatgta tatatgtctg gcacaattta aaaaagagtg aaccccttct atttttattt
//
LOCUS       XM_071829790            5794 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIME FOR COFFEE
            (LOC139839659), transcript variant X2, mRNA.
ACCESSION   XM_071829790
VERSION     XM_071829790.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5794
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5794
                     /gene="LOC139839659"
                     /note="protein TIME FOR COFFEE; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139839659"
     CDS             314..5320
                     /gene="LOC139839659"
                     /codon_start=1
                     /product="protein TIME FOR COFFEE isoform X2"
                     /protein_id="XP_071685891.1"
                     /db_xref="GeneID:139839659"
                     /translation="MDRNREARRAAATNNNHNHHMAAPPNGLSSSSSRRRHRSNSLRD
                     SPDEDGGVELHEQQQQQGRLRERERERGVVKKDRDRERERASRSKRRRENRMMMMTSH
                     NSNRDTEIDDTSEESVNDEEEEEDDDGGNGLQRMLPPPSSNPVASGTVVSTNHHSLHS
                     QQQLHHRKTFPPAANKVIRAAAPPPAWKAADEMIGVSVPRKARSASTKRSHEWVSGSG
                     VVGGGASTEQNHRQSSASPVHLASATASPVPAAPPSPSSSSVSVRKKMKANGGGSKPR
                     PPKSSSKSSSSNPEELEIEIAEVLYGLMTQSQAPSKKEITPSNDNKSTNDNSKSRVSS
                     PISNSTVIPKNSTSLSTVAPKRKKPRQVSENTFGVRNNPVKTEVDQHNQQHHHHHQSP
                     KTDSSGSAAVPPVAAENGGSFGFTSLPGQQPSSTPSSALPQAVAANESKCDVGVVLTK
                     QEVEKEASAVGKSKFTDGVTTTTASVTTTTLKTANLEAESQKEEKFEIDLMAPPPQQR
                     TSQESDGDIDFSDRKQIATQELNKIKEDEKLVKCGKLETLSLTEELKNSKAESLKQSM
                     NEQLHIDLEKPNKDSANLVSCSSNKSLHQALKHQQLSAKPETHSEKTAQPSSMQIPMS
                     VANWPPMGYVAPLQGVISMDGNPMPSAAPIQPIFTQPRPKRCATHCYIARNIHYLQQF
                     MKINPFWPAASAPAPIFGGKPHNVNVMPSTELHGNIPQSLQDKSPGLNIFPGHAAAKE
                     NKSSQPTTVPDPAQRKQQVLLQQAMPPVTPNNILHGPAFIFPFNQQQAVAASASVRPG
                     SSKLNSTSAAGGLVGPSGAVANTATVSTSTSAAAPALSFNYPNMSANETQYLAILQNN
                     PYTFPIPAAVGAPPNYRGNPHAQAMPLFNGSFYSSQMIHPSQIPQTSQQAPPAQSLNH
                     HPSQSQQVSQTHQNSSGSTSSSQKHLQAQQRQQQQQQGGSAAVNGSGSGNGASLHNNY
                     PAAHKNRSNQPSQHLNPPLQARHLENEVTGGEDSPSTADSRASRAANTMSVYGHNFAM
                     PVHSHNFALMNPQTAMSNTAVSGNSNDKKQQHQQSQQQGLKRGGAESSLPQTFAMSFA
                     PMNGSTGAMAQNHAAMFQNLPESLRQTYHHMMTAPASAASSHHSQQKKESRGTEDASR
                     TAGHEFSNVDEDRKGSAGLTAKSGHSIAFSRPDLAKDASVSSPAVSSTSVIDSSLRTN
                     INLGANNRSTPRSVISNSVAAPQSNHQLNTQLQQQHHQHQQQVLQLQKQQQQQHQQQQ
                     QHQHHQLNARSKNPPSSNGGVYPDHLVTSSSSNANANKFPSSLSSFPLQTSNASSSPV
                     QSPQWRNSVRGPATSQVPSSLATSTTSSLKNLHQSPHQTQQQQQSGRPHQQSHTQISF
                     GAASQKLPSTTSSSTSHVQQQSQNQNQNQNPGSNSNNNQSPSPPMLVGSPTTSSMSKG
                     GGGSPRMNAAGSASTSGRPGQISSLSSSSQQPKNSPVGTQRPSPSILGNPHNSNSAKS
                     QQQQQQQHLQQQVPKQVFQQHQAQAQAQAQAQAQAHMFFTHPYMQVQQAQAQAQAQAQ
                     AQAQQHSGSPNTAAGYYAPRKQHSSQLQNHQTSTEMLSLCPPVTLANTTTSDPAKAIA
                     AATSNLKGGGGVGLGSQQGILNAAPYGSGPQSSMPAGFPQYAPAAVQVKPVEQKQPAA
                     "
ORIGIN      
        1 aaaataagga agagagagaa aagagaaagt taagaagata gaaagagatc tgagagagtg
       61 tgattcataa aaaaaaaaaa tcatcaatca acctcttcaa ttcaatttaa gaataataat
      121 atttcaattt catttcattt gtgtatctat ctatatctat atctatctat ctctcggttg
      181 ataatttaga aattcgccgg agtagctgtt ttgttgtagt aaattaggtt tccggtaagt
      241 tatgtgatga tagatacaag agtattagta gatctgagat tattatatct atatctatat
      301 ttatcaatta taaatggata gaaatcgaga agcaagacga gcagcagcta ctaataataa
      361 tcataatcat catatggccg ctccaccaaa cggattatca tcttcatcat ctagacgaag
      421 acatcgtagt aatagtctac gtgattcacc tgatgaggat ggaggtgtgg agttacatga
      481 acaacaacag caacagggta ggttaagaga acgagaacgg gagcggggcg tggttaaaaa
      541 agatcgagat cgagaacggg agagagcgag taggagtaaa aggaggagag aaaataggat
      601 gatgatgatg actagtcata atagtaatag agatacagaa attgatgata catctgaaga
      661 aagtgtaaat gatgaagaag aagaagaaga tgatgatggt ggaaatggtt tacagcggat
      721 gttaccacca ccgtcgtcga atccggtagc ttcaggaaca gttgtgtcta ctaatcatca
      781 tagtttacat tctcaacagc aacttcatca tcggaaaact tttcctccgg cggctaataa
      841 agttattaga gcggctgcgc cgccgccggc gtggaaagct gccgatgaga tgattggtgt
      901 ttctgttcca agaaaagctc ggtcagcatc tacaaagagg tcacatgaat gggtttctgg
      961 tagtggtgtg gttggtggag gtgcaagtac agagcaaaat caccggcaat catcagcgtc
     1021 accggtgcat ctagcttcag caactgcctc accggtgccg gcggctccgc catctccttc
     1081 ttcttcaagt gtttcagtca gaaagaagat gaaagcaaat ggaggggggt caaaaccaag
     1141 gccaccaaaa tcatcatcaa agtcatcatc ttcaaatcca gaagagcttg aaatagagat
     1201 agcagaggtt ttatatggtc ttatgacaca atcacaagca ccatctaaga aagaaatcac
     1261 accatcaaat gataacaaat caactaatga taacagcaaa tctagagttt catctccgat
     1321 ctcaaactct acagtcatac ctaaaaattc aacgtctttg tcaacagtag caccaaagag
     1381 gaagaaacca aggcaagtgt cagagaatac ttttggtgta cgaaacaatc cggtcaaaac
     1441 tgaggttgat caacataatc agcaacatca tcatcatcat cagtctccca agactgatag
     1501 ctcaggatct gctgctgttc ctcctgttgc agctgagaat ggtggctctt ttggattcac
     1561 tagtttgcca ggtcagcagc cttcatcgac gccatcttcg gcgttaccac aggcggtggc
     1621 ggctaatgag agtaaatgtg atgtgggtgt cgtgttgacc aaacaagagg ttgagaagga
     1681 ggcttctgct gttggtaaaa gtaaatttac cgatggcgtg acaacaacca ctgcatcggt
     1741 gacaacgact accctgaaaa cagcaaattt ggaggccgaa agtcaaaagg aagaaaaatt
     1801 tgaaatagat ctgatggcac cacctcctca acagagaact tcgcaagaaa gtgatggcga
     1861 tatcgatttt tcggatcgga aacagattgc aactcaggaa ttgaacaaga ttaaggaaga
     1921 tgagaaactt gtgaaatgtg gcaagttaga aactttgagt ttgactgagg agctcaagaa
     1981 ttcaaaggca gaatcattaa agcaatctat gaatgaacaa cttcatattg atttggaaaa
     2041 accgaataag gacagtgcca acttggtaag ttgtagcagc aacaaatcac ttcatcaagc
     2101 tcttaagcat cagcaattat cagctaaacc tgaaactcac tctgaaaaga cagctcagcc
     2161 gagttctatg caaattccaa tgtctgtggc taattggcct ccaatggggt atgtggcacc
     2221 attgcaggga gtcatatcaa tggatggcaa cccaatgcct tcagcagcac ccattcagcc
     2281 aatatttaca cagccaagac caaaaaggtg cgccacacat tgctacattg caaggaacat
     2341 tcactatctt caacaattca tgaagataaa cccattttgg ccagctgcat ctgcccctgc
     2401 gccaatattt gggggcaagc ctcacaatgt aaatgtcatg ccttctaccg aattacatgg
     2461 aaacattcca cagtctttgc aagacaaatc acccggactc aatatcttcc ctggtcatgc
     2521 agctgctaaa gaaaacaagt cgtctcaacc cacaaccgtt ccagaccctg cccaaagaaa
     2581 gcaacaggtt ttgcttcaac aagcaatgcc acctgtcact cccaacaata tactacatgg
     2641 gcctgctttc atctttcctt tcaaccagca acaagcagtg gcagcttctg cttctgttag
     2701 acccggatct tcaaagctta atagtactag tgccgcaggt ggtttggttg gtccttcagg
     2761 tgctgtagca aatacagcta cagttagtac atccacttca gcggctgctc ctgcgttgag
     2821 cttcaattat cccaatatga gcgccaacga aacacaatac ctggcaattt tgcagaacaa
     2881 tccatacaca ttcccaatac ctgcagcagt tggagcccca ccgaattata gaggcaaccc
     2941 tcatgcacaa gccatgcctc ttttcaacgg ctctttctac tcatctcaga tgatccaccc
     3001 gtctcaaatc ccacaaacgt cccaacaagc cccacctgct caatctctga atcatcaccc
     3061 ttcgcagtct caacaagtct cacaaactca tcagaacagt agtggctcta cctcatcttc
     3121 acaaaagcac ttgcaagctc agcagcggca gcaacagcag caacaaggcg gtagtgcggc
     3181 ggttaacggt agtgggagtg gaaatggtgc aagtttacat aataactatc ctgctgccca
     3241 taaaaacaga tcaaatcaac cttcccagca cctgaaccca ccactacaag ctcgccatct
     3301 tgaaaatgaa gtgactggtg gcgaggatag cccatcgact gccgacagta gagcctctcg
     3361 ggctgcaaac actatgagtg tttatggaca taattttgct atgcccgttc attcccataa
     3421 ctttgctctc atgaaccctc aaactgcaat gtcaaatact gctgttagtg gcaactcgaa
     3481 tgacaagaaa cagcagcatc agcaatcgca gcaacaaggg ttaaaaaggg gtggtgccga
     3541 gtcatctttg ccacaaactt ttgcgatgtc ttttgctccc atgaatggta gtactggtgc
     3601 catggctcaa aaccatgcag ccatgtttca aaacttaccg gaatcattaa ggcaaactta
     3661 tcaccatatg atgacggcgc ctgcatcagc agcatcgagt caccattctc aacaaaagaa
     3721 ggaatctaga ggaaccgaag atgcttctcg aaccgcaggt catgagtttt cgaatgttga
     3781 tgaggataga aagggcagtg cagggttgac cgctaaatcc ggtcactcca ttgctttttc
     3841 aagaccagac cttgccaaag atgcctctgt gtcatcaccg gctgtctcta gtacctctgt
     3901 gattgatagt tctttgagga ctaatatcaa tcttggcgca aataaccgat cgactcctcg
     3961 atcggttatt tcaaattctg ttgcagctcc tcaatctaat catcagttaa acactcaatt
     4021 acagcagcaa catcatcaac atcagcagca agtccttcag cttcaaaagc aacaacagca
     4081 acaacatcaa caacaacaac agcatcaaca tcaccaattg aatgctagga gtaaaaatcc
     4141 accatcaagc aatggaggtg tgtacccaga tcatcttgta acttcatcat cttcaaatgc
     4201 taatgctaat aagttcccga gttccttatc ttcatttcca cttcaaacaa gcaatgctag
     4261 tagtagcccg gttcaatctc ctcagtggag aaactcggtt aggggtcccg ctacctccca
     4321 agttccatca tcacttgcta cgtcaaccac atcatctctc aagaatcttc accaatcccc
     4381 ccaccaaacc cagcaacaac agcagtcagg tagaccccac caacaatcgc atacacagat
     4441 ttcgtttggt gcagcaagtc agaaacttcc ttccacaaca tcatcatcaa catcacacgt
     4501 gcaacaacag tctcagaatc aaaatcaaaa tcaaaatcca ggaagcaata gtaataataa
     4561 ccagagtcca tctccgccaa tgttggttgg ttctcctacg acatcttcga tgtccaaagg
     4621 cggtggcgga agccccagaa tgaatgctgc tggatcagca tcgacaagtg gtagacctgg
     4681 tcagatttct tctttgtcat cgtcgtctca acaacctaaa aactcccccg taggaaccca
     4741 gagaccttca ccttccattc ttggtaatcc tcacaactca aattctgcca agtctcaaca
     4801 gcagcaacag caacaacatc tacaacaaca ggtgccaaaa caagtgtttc agcaacacca
     4861 agcccaagcc caagcccaag cccaagccca agcccaagcc catatgttct ttacacatcc
     4921 ttacatgcaa gttcaacagg ctcaggctca ggctcaggct caggctcagg ctcaggctca
     4981 acaacattca ggcagcccaa atacagcggc agggtattat gctcctagaa agcagcactc
     5041 atcacagctg cagaatcatc aaacatcaac agaaatgctg tcgctctgtc cacctgtgac
     5101 gttagcaaat accaccacat cggatcctgc aaaagcaata gcagcagcta ctagtaattt
     5161 aaaaggtggt ggtggtgtag ggttggggtc acagcaaggg attttaaatg cagctccata
     5221 tggttctgga ccacagtctt ccatgcctgc tggcttcccc cagtatgccc ctgctgcagt
     5281 tcaggtcaaa cccgttgagc aaaaacaacc agctgcctga gaagaagtaa aagtcatata
     5341 tgctggcaag ccgagctgtg ttgtgctggt ataatcagcc cgagccggga tgcagatgag
     5401 ccagacaagt gttttggatc aaagtttttg atgggttggg gctaaaattc tccaaggagc
     5461 tttgaagttg tgatataatt gggggcacga atcattttgt aaagggaagg gagggcctgt
     5521 ctgtttggtg gataaagaag tttggtgctt ctttgtgttt taggtgatag tctttttttt
     5581 gtggggggtt ttctttttgt tgaatgatct cccttgttga aagataagat gaagtttcaa
     5641 atgaaaatat atctagttgg acatataatt atatatttac taatatgaaa cagaaatggg
     5701 agggtgtgca tgtttagcat atatatttat attttatata tgtatatatg tctggcacaa
     5761 tttaaaaaag agtgaacccc ttctattttt attt
//
LOCUS       XM_071829791            5867 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIME FOR COFFEE
            (LOC139839659), transcript variant X3, mRNA.
ACCESSION   XM_071829791
VERSION     XM_071829791.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5867
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5867
                     /gene="LOC139839659"
                     /note="protein TIME FOR COFFEE; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139839659"
     CDS             314..5320
                     /gene="LOC139839659"
                     /codon_start=1
                     /product="protein TIME FOR COFFEE isoform X3"
                     /protein_id="XP_071685892.1"
                     /db_xref="GeneID:139839659"
                     /translation="MDRNREARRAAATNNNHNHHMAAPPNGLSSSSSRRRHRSNSLRD
                     SPDEDGGVELHEQQQQQGRLRERERERGVVKKDRDRERERASRSKRRRENRMMMMTSH
                     NSNRDTEIDDTSEESVNDEEEEEDDDGGNGLQRMLPPPSSNPVASGTVVSTNHHSLHS
                     QQQLHHRKTFPPAANKVIRAAAPPPAWKAADEMIGVSVPRKARSASTKRSHEWVSGSG
                     VVGGGASTEQNHRQSSASPVHLASATASPVPAAPPSPSSSSVSVRKKMKANGGGSKPR
                     PPKSSSKSSSSNPEELEIEIAEVLYGLMTQSQAPSKKEITPSNDNKSTNDNSKSRVSS
                     PISNSTVIPKNSTSLSTVAPKRKKPRQVSENTFGVRNNPVKTEVDQHNQQHHHHHQSP
                     KTDSSGSAAVPPVAAENGGSFGFTSLPGQQPSSTPSSALPQAVAANESKCDVGVVLTK
                     QEVEKEASAVGKSKFTDGVTTTTASVTTTTLKTANLEAESQKEEKFEIDLMAPPPQQR
                     TSQESDGDIDFSDRKQIATQELNKIKEDEKLVKCGKLETLSLTEELKNSKAESLKQSM
                     NEQLHIDLEKPNKDSANLVSCSSNKSLHQALKHQQLSAKPETHSEKTAQPSSMQIPMS
                     VANWPPMGYVAPLQGVISMDGNPMPSAAPIQPIFTQPRPKRCATHCYIARNIHYLQQF
                     MKINPFWPAASAPAPIFGGKPHNVNVMPSTELHGNIPQSLQDKSPGLNIFPGHAAAKE
                     NKSSQPTTVPDPAQRKQQVLLQQAMPPVTPNNILHGPAFIFPFNQQQAVAASASVRPG
                     SSKLNSTSAAGGLVGPSGAVANTATVSTSTSAAAPALSFNYPNMSANETQYLAILQNN
                     PYTFPIPAAVGAPPNYRGNPHAQAMPLFNGSFYSSQMIHPSQIPQTSQQAPPAQSLNH
                     HPSQSQQVSQTHQNSSGSTSSSQKHLQAQQRQQQQQQGGSAAVNGSGSGNGASLHNNY
                     PAAHKNRSNQPSQHLNPPLQARHLENEVTGGEDSPSTADSRASRAANTMSVYGHNFAM
                     PVHSHNFALMNPQTAMSNTAVSGNSNDKKQQHQQSQQQGLKRGGAESSLPQTFAMSFA
                     PMNGSTGAMAQNHAAMFQNLPESLRQTYHHMMTAPASAASSHHSQQKKESRGTEDASR
                     TAGHEFSNVDEDRKGSAGLTAKSGHSIAFSRPDLAKDASVSSPAVSSTSVIDSSLRTN
                     INLGANNRSTPRSVISNSVAAPQSNHQLNTQLQQQHHQHQQQVLQLQKQQQQQHQQQQ
                     QHQHHQLNARSKNPPSSNGGVYPDHLVTSSSSNANANKFPSSLSSFPLQTSNASSSPV
                     QSPQWRNSVRGPATSQVPSSLATSTTSSLKNLHQSPHQTQQQQQSGRPHQQSHTQISF
                     GAASQKLPSTTSSSTSHVQQQSQNQNQNQNPGSNSNNNQSPSPPMLVGSPTTSSMSKG
                     GGGSPRMNAAGSASTSGRPGQISSLSSSSQQPKNSPVGTQRPSPSILGNPHNSNSAKS
                     QQQQQQQHLQQQVPKQVFQQHQAQAQAQAQAQAQAHMFFTHPYMQVQQAQAQAQAQAQ
                     AQAQQHSGSPNTAAGYYAPRKQHSSQLQNHQTSTEMLSLCPPVTLANTTTSDPAKAIA
                     AATSNLKGGGGVGLGSQQGILNAAPYGSGPQSSMPAGFPQYAPAAVQVKPVEQKQPAV
                     "
ORIGIN      
        1 aaaataagga agagagagaa aagagaaagt taagaagata gaaagagatc tgagagagtg
       61 tgattcataa aaaaaaaaaa tcatcaatca acctcttcaa ttcaatttaa gaataataat
      121 atttcaattt catttcattt gtgtatctat ctatatctat atctatctat ctctcggttg
      181 ataatttaga aattcgccgg agtagctgtt ttgttgtagt aaattaggtt tccggtaagt
      241 tatgtgatga tagatacaag agtattagta gatctgagat tattatatct atatctatat
      301 ttatcaatta taaatggata gaaatcgaga agcaagacga gcagcagcta ctaataataa
      361 tcataatcat catatggccg ctccaccaaa cggattatca tcttcatcat ctagacgaag
      421 acatcgtagt aatagtctac gtgattcacc tgatgaggat ggaggtgtgg agttacatga
      481 acaacaacag caacagggta ggttaagaga acgagaacgg gagcggggcg tggttaaaaa
      541 agatcgagat cgagaacggg agagagcgag taggagtaaa aggaggagag aaaataggat
      601 gatgatgatg actagtcata atagtaatag agatacagaa attgatgata catctgaaga
      661 aagtgtaaat gatgaagaag aagaagaaga tgatgatggt ggaaatggtt tacagcggat
      721 gttaccacca ccgtcgtcga atccggtagc ttcaggaaca gttgtgtcta ctaatcatca
      781 tagtttacat tctcaacagc aacttcatca tcggaaaact tttcctccgg cggctaataa
      841 agttattaga gcggctgcgc cgccgccggc gtggaaagct gccgatgaga tgattggtgt
      901 ttctgttcca agaaaagctc ggtcagcatc tacaaagagg tcacatgaat gggtttctgg
      961 tagtggtgtg gttggtggag gtgcaagtac agagcaaaat caccggcaat catcagcgtc
     1021 accggtgcat ctagcttcag caactgcctc accggtgccg gcggctccgc catctccttc
     1081 ttcttcaagt gtttcagtca gaaagaagat gaaagcaaat ggaggggggt caaaaccaag
     1141 gccaccaaaa tcatcatcaa agtcatcatc ttcaaatcca gaagagcttg aaatagagat
     1201 agcagaggtt ttatatggtc ttatgacaca atcacaagca ccatctaaga aagaaatcac
     1261 accatcaaat gataacaaat caactaatga taacagcaaa tctagagttt catctccgat
     1321 ctcaaactct acagtcatac ctaaaaattc aacgtctttg tcaacagtag caccaaagag
     1381 gaagaaacca aggcaagtgt cagagaatac ttttggtgta cgaaacaatc cggtcaaaac
     1441 tgaggttgat caacataatc agcaacatca tcatcatcat cagtctccca agactgatag
     1501 ctcaggatct gctgctgttc ctcctgttgc agctgagaat ggtggctctt ttggattcac
     1561 tagtttgcca ggtcagcagc cttcatcgac gccatcttcg gcgttaccac aggcggtggc
     1621 ggctaatgag agtaaatgtg atgtgggtgt cgtgttgacc aaacaagagg ttgagaagga
     1681 ggcttctgct gttggtaaaa gtaaatttac cgatggcgtg acaacaacca ctgcatcggt
     1741 gacaacgact accctgaaaa cagcaaattt ggaggccgaa agtcaaaagg aagaaaaatt
     1801 tgaaatagat ctgatggcac cacctcctca acagagaact tcgcaagaaa gtgatggcga
     1861 tatcgatttt tcggatcgga aacagattgc aactcaggaa ttgaacaaga ttaaggaaga
     1921 tgagaaactt gtgaaatgtg gcaagttaga aactttgagt ttgactgagg agctcaagaa
     1981 ttcaaaggca gaatcattaa agcaatctat gaatgaacaa cttcatattg atttggaaaa
     2041 accgaataag gacagtgcca acttggtaag ttgtagcagc aacaaatcac ttcatcaagc
     2101 tcttaagcat cagcaattat cagctaaacc tgaaactcac tctgaaaaga cagctcagcc
     2161 gagttctatg caaattccaa tgtctgtggc taattggcct ccaatggggt atgtggcacc
     2221 attgcaggga gtcatatcaa tggatggcaa cccaatgcct tcagcagcac ccattcagcc
     2281 aatatttaca cagccaagac caaaaaggtg cgccacacat tgctacattg caaggaacat
     2341 tcactatctt caacaattca tgaagataaa cccattttgg ccagctgcat ctgcccctgc
     2401 gccaatattt gggggcaagc ctcacaatgt aaatgtcatg ccttctaccg aattacatgg
     2461 aaacattcca cagtctttgc aagacaaatc acccggactc aatatcttcc ctggtcatgc
     2521 agctgctaaa gaaaacaagt cgtctcaacc cacaaccgtt ccagaccctg cccaaagaaa
     2581 gcaacaggtt ttgcttcaac aagcaatgcc acctgtcact cccaacaata tactacatgg
     2641 gcctgctttc atctttcctt tcaaccagca acaagcagtg gcagcttctg cttctgttag
     2701 acccggatct tcaaagctta atagtactag tgccgcaggt ggtttggttg gtccttcagg
     2761 tgctgtagca aatacagcta cagttagtac atccacttca gcggctgctc ctgcgttgag
     2821 cttcaattat cccaatatga gcgccaacga aacacaatac ctggcaattt tgcagaacaa
     2881 tccatacaca ttcccaatac ctgcagcagt tggagcccca ccgaattata gaggcaaccc
     2941 tcatgcacaa gccatgcctc ttttcaacgg ctctttctac tcatctcaga tgatccaccc
     3001 gtctcaaatc ccacaaacgt cccaacaagc cccacctgct caatctctga atcatcaccc
     3061 ttcgcagtct caacaagtct cacaaactca tcagaacagt agtggctcta cctcatcttc
     3121 acaaaagcac ttgcaagctc agcagcggca gcaacagcag caacaaggcg gtagtgcggc
     3181 ggttaacggt agtgggagtg gaaatggtgc aagtttacat aataactatc ctgctgccca
     3241 taaaaacaga tcaaatcaac cttcccagca cctgaaccca ccactacaag ctcgccatct
     3301 tgaaaatgaa gtgactggtg gcgaggatag cccatcgact gccgacagta gagcctctcg
     3361 ggctgcaaac actatgagtg tttatggaca taattttgct atgcccgttc attcccataa
     3421 ctttgctctc atgaaccctc aaactgcaat gtcaaatact gctgttagtg gcaactcgaa
     3481 tgacaagaaa cagcagcatc agcaatcgca gcaacaaggg ttaaaaaggg gtggtgccga
     3541 gtcatctttg ccacaaactt ttgcgatgtc ttttgctccc atgaatggta gtactggtgc
     3601 catggctcaa aaccatgcag ccatgtttca aaacttaccg gaatcattaa ggcaaactta
     3661 tcaccatatg atgacggcgc ctgcatcagc agcatcgagt caccattctc aacaaaagaa
     3721 ggaatctaga ggaaccgaag atgcttctcg aaccgcaggt catgagtttt cgaatgttga
     3781 tgaggataga aagggcagtg cagggttgac cgctaaatcc ggtcactcca ttgctttttc
     3841 aagaccagac cttgccaaag atgcctctgt gtcatcaccg gctgtctcta gtacctctgt
     3901 gattgatagt tctttgagga ctaatatcaa tcttggcgca aataaccgat cgactcctcg
     3961 atcggttatt tcaaattctg ttgcagctcc tcaatctaat catcagttaa acactcaatt
     4021 acagcagcaa catcatcaac atcagcagca agtccttcag cttcaaaagc aacaacagca
     4081 acaacatcaa caacaacaac agcatcaaca tcaccaattg aatgctagga gtaaaaatcc
     4141 accatcaagc aatggaggtg tgtacccaga tcatcttgta acttcatcat cttcaaatgc
     4201 taatgctaat aagttcccga gttccttatc ttcatttcca cttcaaacaa gcaatgctag
     4261 tagtagcccg gttcaatctc ctcagtggag aaactcggtt aggggtcccg ctacctccca
     4321 agttccatca tcacttgcta cgtcaaccac atcatctctc aagaatcttc accaatcccc
     4381 ccaccaaacc cagcaacaac agcagtcagg tagaccccac caacaatcgc atacacagat
     4441 ttcgtttggt gcagcaagtc agaaacttcc ttccacaaca tcatcatcaa catcacacgt
     4501 gcaacaacag tctcagaatc aaaatcaaaa tcaaaatcca ggaagcaata gtaataataa
     4561 ccagagtcca tctccgccaa tgttggttgg ttctcctacg acatcttcga tgtccaaagg
     4621 cggtggcgga agccccagaa tgaatgctgc tggatcagca tcgacaagtg gtagacctgg
     4681 tcagatttct tctttgtcat cgtcgtctca acaacctaaa aactcccccg taggaaccca
     4741 gagaccttca ccttccattc ttggtaatcc tcacaactca aattctgcca agtctcaaca
     4801 gcagcaacag caacaacatc tacaacaaca ggtgccaaaa caagtgtttc agcaacacca
     4861 agcccaagcc caagcccaag cccaagccca agcccaagcc catatgttct ttacacatcc
     4921 ttacatgcaa gttcaacagg ctcaggctca ggctcaggct caggctcagg ctcaggctca
     4981 acaacattca ggcagcccaa atacagcggc agggtattat gctcctagaa agcagcactc
     5041 atcacagctg cagaatcatc aaacatcaac agaaatgctg tcgctctgtc cacctgtgac
     5101 gttagcaaat accaccacat cggatcctgc aaaagcaata gcagcagcta ctagtaattt
     5161 aaaaggtggt ggtggtgtag ggttggggtc acagcaaggg attttaaatg cagctccata
     5221 tggttctgga ccacagtctt ccatgcctgc tggcttcccc cagtatgccc ctgctgcagt
     5281 tcaggtcaaa cccgttgagc aaaaacaacc agctgtttga atgaggacta taaatgagaa
     5341 atacgactca atttttgacc aggaaatgac aatttgcgta cgtggcagcc tgagaagaag
     5401 taaaagtcat atatgctggc aagccgagct gtgttgtgct ggtataatca gcccgagccg
     5461 ggatgcagat gagccagaca agtgttttgg atcaaagttt ttgatgggtt ggggctaaaa
     5521 ttctccaagg agctttgaag ttgtgatata attgggggca cgaatcattt tgtaaaggga
     5581 agggagggcc tgtctgtttg gtggataaag aagtttggtg cttctttgtg ttttaggtga
     5641 tagtcttttt tttgtggggg gttttctttt tgttgaatga tctcccttgt tgaaagataa
     5701 gatgaagttt caaatgaaaa tatatctagt tggacatata attatatatt tactaatatg
     5761 aaacagaaat gggagggtgt gcatgtttag catatatatt tatattttat atatgtatat
     5821 atgtctggca caatttaaaa aagagtgaac cccttctatt tttattt
//
LOCUS       XM_071829792            1141 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein PP2-A13-like
            (LOC139839660), mRNA.
ACCESSION   XM_071829792
VERSION     XM_071829792.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1141
                     /gene="LOC139839660"
                     /note="F-box protein PP2-A13-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     Proteins"
                     /db_xref="GeneID:139839660"
     CDS             105..959
                     /gene="LOC139839660"
                     /codon_start=1
                     /product="F-box protein PP2-A13-like"
                     /protein_id="XP_071685893.1"
                     /db_xref="GeneID:139839660"
                     /translation="MGSGLSSFLLMCSSTTNAPVKSPEPCLGDLPESVVGSVLLYLTP
                     QDICRLASLNRAFRYASTADFVWESKLPNNYDSIISRVFDDNKNKFSSTLCKKEIYAR
                     LSTPSLIDGGTKKVWLDKGTGKACVLISSNGLAITGIDDRRYWSWISTEESRFRSVAY
                     LQQIWWFEVDGEIDFPFPCGTYSLFFRLQLGRSGRRFGRRVCNSDHVHGWDVKPVKFQ
                     LSTSDGQKAISQCYLTEPGKWNLYRAGDFVVEDSMVPMKIKFSMTQIDCTHTKGGLCV
                     DSVLIRPK"
     misc_feature    183..320
                     /gene="LOC139839660"
                     /note="F-box domain found in Arabidopsis thaliana
                     SKP1-interacting partner 3 (AtSKIP3) and similar proteins;
                     Region: F-box_AtSKIP3-like; cd22162"
                     /db_xref="CDD:438933"
     misc_feature    order(192..194,204..206,213..218,225..230,240..242,
                     246..251,261..269,273..275)
                     /gene="LOC139839660"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438933"
     misc_feature    474..953
                     /gene="LOC139839660"
                     /note="Phloem protein 2; Region: PP2; pfam14299"
                     /db_xref="CDD:464128"
     polyA_site      1141
                     /gene="LOC139839660"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcacccccgc aacccactga gaattttcag ataattcatt aaattttcag atcaaaatta
       61 aaacccctta aaaaaaatct gatcttgaga ttgggttttt gtctatggga tccgggcttt
      121 catcatttct tcttatgtgt agtagcacca ccaatgctcc ggtgaagtcg ccggagccgt
      181 gtctcggtga tctgccggaa agtgtggtgg gttctgttct gctgtactta accccacaag
      241 atatatgtag actcgcatct cttaaccgtg cttttcgtta tgcatcaacg gctgattttg
      301 tctgggaatc aaagttacca aacaattatg attctattat ttccagggtg tttgatgata
      361 ataaaaataa attttcatct accctttgta aaaaagaaat ttatgcaagg ctgtctacac
      421 ctagtctaat tgatggtggt acaaagaaag tttggctgga taaaggtaca ggaaaagcgt
      481 gtgtattgat atcttccaac ggattagcaa taacggggat tgatgatcgt agatattgga
      541 gctggatttc gaccgaagaa tctagattcc gttccgtagc ttatcttcaa caaatctggt
      601 ggtttgaagt cgatggagaa attgacttcc cttttccatg tgggacctac agtctcttct
      661 tccgtttaca acttgggcgg tccggcaggc ggtttgggcg gcgagtttgc aactccgatc
      721 acgtccatgg ctgggacgta aaaccggtaa agtttcagct ttcgacttca gatggtcaaa
      781 aggcgataag tcaatgctat ttaacggaac ctggaaaatg gaatctttat cgagctggtg
      841 attttgttgt tgaggattca atggtaccga tgaagatcaa gttttcgatg acgcagatcg
      901 attgcacaca cactaaaggt ggactgtgtg tggattctgt tctcattcgc cctaaatgaa
      961 gatttgaaag ttttgtttga tagatgatgt ataaatgtag gttaaaagca atatttttta
     1021 tttgcaacta acctttttta gtagagtgct tcttgtatat gtatgatagt atatattata
     1081 taaatagtga ggtgagatca ataactacgt agtattaatt agtgatttgt agttttgtac
     1141 a
//
LOCUS       XR_011757021             598 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839661), ncRNA.
ACCESSION   XR_011757021
VERSION     XR_011757021.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..598
                     /gene="LOC139839661"
                     /note="uncharacterized LOC139839661; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839661"
     ncRNA           1..598
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839661"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839661"
ORIGIN      
        1 gaggaataac aaatggatga cgatgttgag ttgcaatctg aaagccgtga tatgatactt
       61 ggggaatgtc aagaataagt gatttttgac tctctggatg tcgaaccatc taatgttatt
      121 catgaattta tgagctctaa tcgaattgaa ggtgcatcta gttcaagtgt tccattctat
      181 actccaaatg gtagtagata cttcataccc gaagttcaag caattcacaa accgattgta
      241 ggaaccatgt tcgattcact tgatgaagca ttaattatgt atcagattta tgctgaaaaa
      301 gctggtttct ctgtaataaa gtacaaggct aaacataaag caaatggtga tttatctcat
      361 aggttgtttg tatgcaatag acaaggtggt ttcatctaat gatgttgctg aagtgtacgc
      421 gattcaatat gttaacatga aaactgacgt tgtttctcga catcaggttg ttcttaacaa
      481 ggatggtaac attgtatgta gctgtaatca ttttggtcgc catggttggt tgtgtcgtca
      541 tattttcggt gtgtttaaca ataactgtat cgaggaaaat ccagaaacat atatcaag
//
LOCUS       XM_071829793            2889 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein phosphatase 2C
            29-like (LOC139839662), mRNA.
ACCESSION   XM_071829793
VERSION     XM_071829793.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2889
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2889
                     /gene="LOC139839662"
                     /note="protein phosphatase 2C 29-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 36 Proteins"
                     /db_xref="GeneID:139839662"
     CDS             126..2417
                     /gene="LOC139839662"
                     /codon_start=1
                     /product="protein phosphatase 2C 29-like"
                     /protein_id="XP_071685894.1"
                     /db_xref="GeneID:139839662"
                     /translation="MGSGFSQLLPCFNPAEKRRSKSPELIFSTTDPLDETLGHSFCYV
                     RSSARFISPTHSDRFVSPSQSLRFESSSTQSRQPCGVVSETGFKAISGASVSANTSTP
                     RTVIQFENIYDDAIASDAASAAGVGTSLIKSGSLVNGFESTSSFSALPLQPLPRGDSA
                     RSGLGQMERAFFMSGPIERGALSGPLDSSNYGSDSAGVPFSAPLNAGMYAKKKRRSIR
                     KAFNRNFPRPWVVPVRNFVSGRKESPAAGVVGAEETEMRNDSDVQWALGKAGEDRVHV
                     VVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYKAMYKELEGLFWDLDDPAQVEDHSCVA
                     PSQEEEEVTDVSAVPENVVKKVSFRSGEEIVTRRKRLWEYLAEEEPEHGLDLSGSERF
                     AFSVDDALTVSKTSSGVNRRSLLLSKLRNGFGKHKEGSRLFAWKFGLDAKEQKEVENR
                     VEDTANVVRSGRKKKDGPVDHTLVLKAMSRALEVTELAYMDMTDKVMDQYPELALMGS
                     CLLAVLMRDEDVYVMNLGDSRAIVAQHDQTEEVGSSGSGDNGIVIEGVVTESVGVVEE
                     GNDVASDVPAQNTRLMALQLSTDHSTSIEEEVTRIKNEHPDDQHCIVNDRVKGRLKVT
                     RAFGAGSLKKAKWNDSLLEMFRNEFIGNAPYISCVPSLRHHQLCPRDQFLVLSSDGLY
                     QYFSNQEVVSHVDNFMEKFPDGDPAQHLIEELLLRAAKKAGMDLHELLEIPQGDRRKY
                     HDDVTVMVISLEGRIWKSSGKYL"
     misc_feature    <1542..2378
                     /gene="LOC139839662"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; Region: PP2Cc; cd00143"
                     /db_xref="CDD:238083"
ORIGIN      
        1 ttcacacata caatcacact cttgctgtgt gtattcaaaa attgaaataa acaaaaataa
       61 ataaataaat tgttagcaaa tcaacaacag tagactgtag actggtgtat agtgaatcaa
      121 atgtgatggg aagtggattc tcgcagcttc tcccctgctt taatccggcg gagaaacggc
      181 ggagtaaatc accggaactt attttctcaa ctaccgatcc acttgatgaa accctaggtc
      241 actccttttg ttacgttcgt tcatctgctc gtttcatttc acctactcat tccgatcgat
      301 tcgtttcacc gtctcaatcc ttacgatttg aatctagctc aacgcaatcg cgacagccgt
      361 gcggtgtcgt ttctgaaact ggatttaaag cgatttcagg tgcatcggta agtgcgaata
      421 cttcaactcc tagaactgtg atccaatttg aaaatattta cgatgatgcc attgctagtg
      481 atgctgcttc tgctgctggt gttggtacta gtttaattaa gtctggtagt ttagttaatg
      541 gatttgagag tacgtcgtcg tttagtgcac ttccgttgca acctttgcca cgtggcgatt
      601 cagctaggtc agggttaggt caaatggaga gagctttttt tatgtctggt ccgattgagc
      661 gtggtgcttt atctggtccg ttggattcga gtaattacgg ttcggattca gctggtgttc
      721 cattttctgc accgcttaat gcgggtatgt atgctaaaaa gaagagacgt agtatacgga
      781 aagcgtttaa taggaacttc cctcggcctt gggttgttcc ggttagaaat tttgttagcg
      841 ggcggaagga atctcctgct gcaggagttg tcggggctga ggagacggag atgaggaatg
      901 atagcgacgt gcagtgggcg ttagggaaag cgggggagga tcgggtgcat gtggttgtat
      961 cagaagagca tggatggttg tttgttggga tttatgatgg atttaatggt cctgatgcac
     1021 ctgaattttt gatggggaat ttgtataaag caatgtataa agagcttgaa ggtttgtttt
     1081 gggatttaga tgatccagct caagttgagg atcattcttg tgtggcacca tcacaagagg
     1141 aggaggaagt aacggatgtt agtgcagttc ctgagaatgt tgtgaagaag gtctcgtttc
     1201 ggtcaggaga agagatagtg actagaagga agagattatg ggaatatttg gcagaggaag
     1261 aacctgaaca cgggcttgat ctttctggtt cagaaaggtt tgcgttttca gtggatgatg
     1321 cattaactgt aagcaaaacc agctcaggag ttaatcgaag atcgttgttg ctgtcaaagt
     1381 tgagaaatgg gttcggtaaa cataaggagg gtagtcgatt atttgcatgg aaatttggat
     1441 tggatgccaa agagcaaaaa gaggtggaaa acagagtaga agatacggcc aatgtcgtta
     1501 gaagtggtag gaagaaaaag gatggtccag tagatcatac attggtattg aaagcaatgt
     1561 cacgggcttt ggaagtaact gagcttgcgt atatggatat gaccgataag gttatggatc
     1621 aatatcctga acttgcgctc atgggttcct gcttattggc tgtgttgatg agagatgagg
     1681 atgtgtatgt gatgaattta ggagatagtc gggctattgt tgcacagcat gatcaaactg
     1741 aagaagttgg ttcatctggt tcaggggata atgggattgt tattgaaggt gtagttaccg
     1801 aatccgttgg tgtagttgaa gaggggaatg atgtggcaag tgatgtaccc gctcaaaata
     1861 caaggttgat ggcattgcaa ctgtctactg atcatagcac aagcatcgaa gaagaagtta
     1921 ctagaataaa aaatgaacat ccagacgacc aacattgtat tgtcaatgat agagtcaaag
     1981 gtcgtcttaa ggttactcgt gcatttgggg ctggatccct taaaaaggcg aaatggaatg
     2041 attcattatt ggagatgttt cgcaatgagt tcattggaaa cgcaccctac atttcttgtg
     2101 ttccttcttt gcgacaccat caattatgtc caagagatca gtttctggtt ctttcatcgg
     2161 atgggcttta tcagtatttt agtaatcagg aagtcgtttc acatgttgac aatttcatgg
     2221 agaagtttcc tgacggtgat ccagctcaac acctgattga agagcttctt ttacgtgcag
     2281 ccaagaaagc tgggatggat ttacatgaat tattggaaat cccacaaggt gatcgtagga
     2341 aataccatga cgacgttaca gtcatggtca tttctcttga aggaagaatt tggaaatcat
     2401 ctggaaaata cctctaaaac aacattaaag acgaacatat atatcacagt tttggatcat
     2461 gatcatcaag ttaaaaccct acaaatggag tagaggtttc aacaagggcc tacttttcgt
     2521 gggtctcaaa ctcaaccata agtgcatcat aaacatattc atagaaaagg tgcttacttg
     2581 ggatctgcag ttggactata tgctcaaaaa tttggtgaaa atatgaacag gtaattgctc
     2641 ttgttgacac agagggacgt gtttattttt ctaatttagg tgatgggggg gtggtaaaga
     2701 atggattatt atttgttttt tagttttact ttctgttaga tttttgcata gatgggaaat
     2761 cttgaggggg agggggttct ttttcttttt cctttatttt tgttacattt attgacattg
     2821 acaaatcttc acttgcaaaa gtgaatatgt aattttgatg cccaatccaa acatatgaat
     2881 tagtttata
//
LOCUS       XM_071829794            2702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839663), transcript variant X1, mRNA.
ACCESSION   XM_071829794
VERSION     XM_071829794.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2702
                     /gene="LOC139839663"
                     /note="uncharacterized LOC139839663; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839663"
     CDS             35..2551
                     /gene="LOC139839663"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685895.1"
                     /db_xref="GeneID:139839663"
                     /translation="MSNIPTSPFTPKASNNQSQSKQSFFADNKHIRYQPINQGIWVKI
                     DHNKQNSPSKNPNPNYNNQQNPTHLVRSKSGLNHQSTRLNSSYNQLYNNFKIRESATN
                     LINRYGKPFPDANNSKTNQLPKPIDKSRITSYLFHNFPEHWCSTDLWDVFKKYGNIHE
                     VYIPRKTLKNGRKFGFVRFLDVPDYHKDSLARRLSLIVAGDNLLKVYKARDPEGKKQA
                     PQPNNAKSGSRNNVKVAFNSPVDERNFKEVVLNKQATNYGIPSIKVNSNDDLIQILGQ
                     AVIAKVKDLEFLEYFNEICESENLGGFTIKYLGGHDLMLIFEEPNPALDLINNSEHPL
                     WKWLEDINPWDPEIYKTSGRLVYVNIFGVPITCWLESTFIDIAKNWGEVIETFNCSIT
                     NENNQDLSHGSVIIKTNNFSPINGQVIINPGDVNQSKAYIIEVQNFSMFNTYGDIDNS
                     SNWDDEILSDDHISDEESHLDCENRVEGNAEKTTRNNNHDPTPSHQTSSNSSKRMDTR
                     PFNNNADNQSLQSPSISKPINHFDTTNPHTHNPSNPETVLNNTSSTKETSPSNETDPI
                     EPPPIPDFNTARPYNTTSYQPKPKTIPLESTVITQPITTNTPPSPPREDTLAIPQPNT
                     VINGPSNHVNDTPVTPSHISGKSNMDSSPQHILTNDLCSPIVTQEHADSVPETLPHHT
                     TNDTPCTTPLNPQSNSPLNFMPAPNATQQTNSDPFNLEPLLYTGKEISKKRKISSTIA
                     KPIIKSKNTSQNPDVKRPRSNMLYIKHLARSGQKLRISQLAKRCKSSSNGGGSTSYFS
                     KGSHMDMVHNKKTKKTGSTSSKSLDTFEFGKSIGIRRNNP"
     misc_feature    446..>595
                     /gene="LOC139839663"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cd00590"
                     /db_xref="CDD:409669"
     misc_feature    <935..1249
                     /gene="LOC139839663"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
     misc_feature    <1655..>2296
                     /gene="LOC139839663"
                     /note="CCR4-NOT transcriptional regulation complex, NOT5
                     subunit [Transcription]; Region: Not5; COG5665"
                     /db_xref="CDD:444384"
ORIGIN      
        1 aaataatagt tgcaatttga aatactcttt tatcatgtca aacataccga catccccttt
       61 tacaccaaaa gcatcgaaca accaatccca gtcgaaacaa tctttctttg ctgataacaa
      121 gcatatccga tatcagccta tcaatcaggg tatttgggtt aaaattgatc ataataagca
      181 aaactcacct tcaaaaaacc ctaaccctaa ttacaataac cagcagaatc caacccacct
      241 tgtccgatcc aaatctggtc tcaatcatca atcgacaagg ttaaactcat cctacaatca
      301 attatacaac aacttcaaaa tacgggaatc agccaccaac cttatcaatc gttatggcaa
      361 gccttttcca gatgcgaata attctaaaac aaatcaattg ccaaaaccga tcgacaagtc
      421 tagaatcact tcatacctct tccacaactt tcccgaacac tggtgttcaa cggacttatg
      481 ggatgttttc aaaaaatatg gcaatatcca cgaggtttac atccccagga agaccttaaa
      541 aaacggaagg aagtttggtt ttgttagatt cttagacgtt ccagattacc acaaagattc
      601 tcttgcgagg agactaagtc tcattgttgc gggtgacaat ttactcaaag tatacaaggc
      661 ccgtgatccc gaaggaaaga aacaagctcc acagcctaac aatgcaaaat cgggttctag
      721 gaacaatgtt aaggttgcat ttaactcacc tgtagacgaa aggaatttca aagaagtggt
      781 cctaaacaag caggctacaa actacggcat cccctcgatt aaggtaaatt ctaatgatga
      841 tcttatccaa atacttggtc aagcggttat tgccaaagtt aaagatcttg aattccttga
      901 atattttaat gaaatatgtg aaagtgaaaa ccttggtggg tttactatca aatacctggg
      961 cgggcatgat ctaatgctta tatttgagga acccaacccg gccctagact tgattaacaa
     1021 ttcggaacac ccattatgga aatggcttga agatataaac ccatgggatc ccgaaattta
     1081 caaaacctct ggtagacttg tttatgttaa catattcggg gtacctatta cttgttggtt
     1141 agaatccaca ttcattgaca tagcaaaaaa ttggggcgag gtaattgaaa cgtttaattg
     1201 ctctataacc aatgagaaca accaagattt atcgcatggc tcggtaatta tcaaaacaaa
     1261 caatttctca ccgataaacg gccaagttat tatcaacccc ggtgacgtca atcaatctaa
     1321 ggcttacatc attgaagttc aaaacttttc tatgtttaac acttatggtg atatcgataa
     1381 ttcgtcgaat tgggatgatg aaattctttc ggacgatcac atttctgacg aagagtccca
     1441 cttggattgt gaaaatcgag ttgaaggaaa cgctgaaaag accacccgta acaacaacca
     1501 cgatcccacg ccttctcacc aaacctcctc taattcctct aaacgaatgg atactcgtcc
     1561 ctttaataat aatgccgata accaatctct ccaatctcct agcatatcga aacccatcaa
     1621 ccactttgac accacaaacc ctcacaccca taatccttcc aatcccgaaa ctgttttaaa
     1681 taatactagc tctacaaaag aaactagccc atcgaatgaa actgatccaa ttgaaccacc
     1741 tcctattcct gattttaata cagcaaggcc atataatacc acctcatatc aaccaaaacc
     1801 aaaaaccatc cctttggagt ccactgtaat cacgcagccc attaccacca ataccccccc
     1861 aagcccacca agagaggata cccttgcaat cccgcagccc aacactgtta ttaacggccc
     1921 atcgaatcat gtaaatgata cccctgttac acctagccac atctcgggta aatctaatat
     1981 ggacagctca cctcaacaca ttctaacaaa tgatttatgc tcaccaatag tgacacaaga
     2041 acatgcagat tctgttcccg aaaccctccc tcaccatacc acaaacgaca ccccctgtac
     2101 taccccttta aaccctcaat ccaactctcc attaaatttt atgcctgccc ctaacgctac
     2161 acaacaaaca aattccgatc ctttcaacct cgaaccttta ctttatacgg gtaaagaaat
     2221 ttctaaaaag agaaaaattt ctagcaccat cgccaaacct atcattaagt caaaaaacac
     2281 ctctcaaaac ccagatgtta aaagacctag atccaatatg ctttacatca aacatctagc
     2341 tagaagtggc caaaaactta gaatctctca actggctaaa cgttgtaagt cctcgtctaa
     2401 cggtggtggt agcacatcct acttctcgaa gggatctcat atggacatgg tacataacaa
     2461 aaagactaaa aagacaggtt ctacctctag caaaagcttg gatacgttcg aattcgggaa
     2521 aagcatcggg attcgtcgca acaacccatg aatccacctc cgtcacatcg attctgaaca
     2581 tttcaggtcg caccatttgg aaagagatta ttaaagctgg aaaagttgct gacaatatag
     2641 gcacaacctt cacatcctcg atttcaaagc gcataggaaa tggcacatca ataagcttct
     2701 gg
//
LOCUS       XM_071829795            2692 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839663), transcript variant X2, mRNA.
ACCESSION   XM_071829795
VERSION     XM_071829795.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2692
                     /gene="LOC139839663"
                     /note="uncharacterized LOC139839663; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839663"
     CDS             35..2551
                     /gene="LOC139839663"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685896.1"
                     /db_xref="GeneID:139839663"
                     /translation="MSNIPTSPFTPKASNNQSQSKQSFFADNKHIRYQPINQGIWVKI
                     DHNKQNSPSKNPNPNYNNQQNPTHLVRSKSGLNHQSTRLNSSYNQLYNNFKIRESATN
                     LINRYGKPFPDANNSKTNQLPKPIDKSRITSYLFHNFPEHWCSTDLWDVFKKYGNIHE
                     VYIPRKTLKNGRKFGFVRFLDVPDYHKDSLARRLSLIVAGDNLLKVYKARDPEGKKQA
                     PQPNNAKSGSRNNVKVAFNSPVDERNFKEVVLNKQATNYGIPSIKVNSNDDLIQILGQ
                     AVIAKVKDLEFLEYFNEICESENLGGFTIKYLGGHDLMLIFEEPNPALDLINNSEHPL
                     WKWLEDINPWDPEIYKTSGRLVYVNIFGVPITCWLESTFIDIAKNWGEVIETFNCSIT
                     NENNQDLSHGSVIIKTNNFSPINGQVIINPGDVNQSKAYIIEVQNFSMFNTYGDIDNS
                     SNWDDEILSDDHISDEESHLDCENRVEGNAEKTTRNNNHDPTPSHQTSSNSSKRMDTR
                     PFNNNADNQSLQSPSISKPINHFDTTNPHTHNPSNPETVLNNTSSTKETSPSNETDPI
                     EPPPIPDFNTARPYNTTSYQPKPKTIPLESTVITQPITTNTPPSPPREDTLAIPQPNT
                     VINGPSNHVNDTPVTPSHISGKSNMDSSPQHILTNDLCSPIVTQEHADSVPETLPHHT
                     TNDTPCTTPLNPQSNSPLNFMPAPNATQQTNSDPFNLEPLLYTGKEISKKRKISSTIA
                     KPIIKSKNTSQNPDVKRPRSNMLYIKHLARSGQKLRISQLAKRCKSSSNGGGSTSYFS
                     KGSHMDMVHNKKTKKTGSTSSKSLDTFEFGKSIGIRRNNP"
     misc_feature    446..>595
                     /gene="LOC139839663"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cd00590"
                     /db_xref="CDD:409669"
     misc_feature    <935..1249
                     /gene="LOC139839663"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
     misc_feature    <1655..>2296
                     /gene="LOC139839663"
                     /note="CCR4-NOT transcriptional regulation complex, NOT5
                     subunit [Transcription]; Region: Not5; COG5665"
                     /db_xref="CDD:444384"
ORIGIN      
        1 aaataatagt tgcaatttga aatactcttt tatcatgtca aacataccga catccccttt
       61 tacaccaaaa gcatcgaaca accaatccca gtcgaaacaa tctttctttg ctgataacaa
      121 gcatatccga tatcagccta tcaatcaggg tatttgggtt aaaattgatc ataataagca
      181 aaactcacct tcaaaaaacc ctaaccctaa ttacaataac cagcagaatc caacccacct
      241 tgtccgatcc aaatctggtc tcaatcatca atcgacaagg ttaaactcat cctacaatca
      301 attatacaac aacttcaaaa tacgggaatc agccaccaac cttatcaatc gttatggcaa
      361 gccttttcca gatgcgaata attctaaaac aaatcaattg ccaaaaccga tcgacaagtc
      421 tagaatcact tcatacctct tccacaactt tcccgaacac tggtgttcaa cggacttatg
      481 ggatgttttc aaaaaatatg gcaatatcca cgaggtttac atccccagga agaccttaaa
      541 aaacggaagg aagtttggtt ttgttagatt cttagacgtt ccagattacc acaaagattc
      601 tcttgcgagg agactaagtc tcattgttgc gggtgacaat ttactcaaag tatacaaggc
      661 ccgtgatccc gaaggaaaga aacaagctcc acagcctaac aatgcaaaat cgggttctag
      721 gaacaatgtt aaggttgcat ttaactcacc tgtagacgaa aggaatttca aagaagtggt
      781 cctaaacaag caggctacaa actacggcat cccctcgatt aaggtaaatt ctaatgatga
      841 tcttatccaa atacttggtc aagcggttat tgccaaagtt aaagatcttg aattccttga
      901 atattttaat gaaatatgtg aaagtgaaaa ccttggtggg tttactatca aatacctggg
      961 cgggcatgat ctaatgctta tatttgagga acccaacccg gccctagact tgattaacaa
     1021 ttcggaacac ccattatgga aatggcttga agatataaac ccatgggatc ccgaaattta
     1081 caaaacctct ggtagacttg tttatgttaa catattcggg gtacctatta cttgttggtt
     1141 agaatccaca ttcattgaca tagcaaaaaa ttggggcgag gtaattgaaa cgtttaattg
     1201 ctctataacc aatgagaaca accaagattt atcgcatggc tcggtaatta tcaaaacaaa
     1261 caatttctca ccgataaacg gccaagttat tatcaacccc ggtgacgtca atcaatctaa
     1321 ggcttacatc attgaagttc aaaacttttc tatgtttaac acttatggtg atatcgataa
     1381 ttcgtcgaat tgggatgatg aaattctttc ggacgatcac atttctgacg aagagtccca
     1441 cttggattgt gaaaatcgag ttgaaggaaa cgctgaaaag accacccgta acaacaacca
     1501 cgatcccacg ccttctcacc aaacctcctc taattcctct aaacgaatgg atactcgtcc
     1561 ctttaataat aatgccgata accaatctct ccaatctcct agcatatcga aacccatcaa
     1621 ccactttgac accacaaacc ctcacaccca taatccttcc aatcccgaaa ctgttttaaa
     1681 taatactagc tctacaaaag aaactagccc atcgaatgaa actgatccaa ttgaaccacc
     1741 tcctattcct gattttaata cagcaaggcc atataatacc acctcatatc aaccaaaacc
     1801 aaaaaccatc cctttggagt ccactgtaat cacgcagccc attaccacca ataccccccc
     1861 aagcccacca agagaggata cccttgcaat cccgcagccc aacactgtta ttaacggccc
     1921 atcgaatcat gtaaatgata cccctgttac acctagccac atctcgggta aatctaatat
     1981 ggacagctca cctcaacaca ttctaacaaa tgatttatgc tcaccaatag tgacacaaga
     2041 acatgcagat tctgttcccg aaaccctccc tcaccatacc acaaacgaca ccccctgtac
     2101 taccccttta aaccctcaat ccaactctcc attaaatttt atgcctgccc ctaacgctac
     2161 acaacaaaca aattccgatc ctttcaacct cgaaccttta ctttatacgg gtaaagaaat
     2221 ttctaaaaag agaaaaattt ctagcaccat cgccaaacct atcattaagt caaaaaacac
     2281 ctctcaaaac ccagatgtta aaagacctag atccaatatg ctttacatca aacatctagc
     2341 tagaagtggc caaaaactta gaatctctca actggctaaa cgttgtaagt cctcgtctaa
     2401 cggtggtggt agcacatcct acttctcgaa gggatctcat atggacatgg tacataacaa
     2461 aaagactaaa aagacaggtt ctacctctag caaaagcttg gatacgttcg aattcgggaa
     2521 aagcatcggg attcgtcgca acaacccatg aatccacctc cgtcacatcg attctgtcgc
     2581 accatttgga aagagattat taaagctgga aaagttgctg acaatatagg cacaaccttc
     2641 acatcctcga tttcaaagcg cataggaaat ggcacatcaa taagcttctg gc
//
LOCUS       XM_071829796            1497 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP sulfurylase 1,
            chloroplastic-like (LOC139839664), mRNA.
ACCESSION   XM_071829796
VERSION     XM_071829796.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1497
                     /gene="LOC139839664"
                     /note="ATP sulfurylase 1, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139839664"
     CDS             3..1163
                     /gene="LOC139839664"
                     /codon_start=1
                     /product="ATP sulfurylase 1, chloroplastic-like"
                     /protein_id="XP_071685897.1"
                     /db_xref="GeneID:139839664"
                     /translation="MVKIKLSRIDLEWVHVLSEGWASPLSGFMRESEFLQTLHFNSLR
                     LGDGSVVNMSLPIVLDIDDAQKNRISGSNSVALVDADDNTVAILNNIEIYKHNKEERI
                     ARTWGTTAPGLPYVEEAITGAGDWLIGGDLEVIQPIKYHDGLDRYRLSPSELRAEFEK
                     RNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPVLLLHPLGGFTKADDVPLSW
                     RMKQHEKVLEDGVLDPENTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPA
                     GMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKKQQKMEFFDPSRAQDF
                     LFISGTKMRTLAKNKKNPPDGFMCPGGWEVLVEYYDSLAANESGRVPQPILA"
     misc_feature    12..1103
                     /gene="LOC139839664"
                     /note="ATP sulphurylase; Region: sopT; TIGR00339"
                     /db_xref="CDD:273023"
     polyA_site      1497
                     /gene="LOC139839664"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atatggttaa gattaagtta tcaagaattg atttagaatg ggttcatgtg ctcagtgaag
       61 gctgggcgag tccattaagc gggttcatga gagaatccga gttcctccaa actcttcatt
      121 ttaactcgct ccgattagga gacgggtcgg ttgtcaatat gtctttaccg attgttctag
      181 acattgatga tgcccaaaag aatcggattt ctggttcaaa tagcgttgct cttgttgatg
      241 ctgatgataa cactgttgct attttgaaca acattgagat ctacaagcac aataaagaag
      301 aacgaattgc aagaacatgg ggtacaactg cccctggtct cccttatgtg gaagaagcca
      361 taactggtgc aggagattgg ttgattggtg gtgatcttga agttatacaa ccaatcaagt
      421 atcatgacgg tcttgaccgt tacagacttt caccttccga acttcgtgcc gaattcgaga
      481 aacgtaatgc tgatgcagtg tttgctttcc agctcaggaa ccctgtgcac aatggtcatg
      541 ctcttttgat gactgacaca aggcgtaggc ttcttgaaat gggttataaa aaccctgttc
      601 ttttgctcca tccactcggg ggttttacaa aggcggacga tgttccgctt agctggcgaa
      661 tgaagcaaca tgagaaggta cttgaagatg gggttcttga tccagaaaac acagtggtat
      721 caatatttcc atctccgatg cactacgctg gcccaaccga ggtgcagtgg catgccaagg
      781 ctaggatcaa cgcaggagcc aacttttaca tagtgggccg tgatccagct ggcatgggtc
      841 atccagtaga gaaaagagat ctttatgatg ctgaccatgg caaaaaagta cttagcatgg
      901 cacctggact tgaacgctta aacattctcc ctttcaaggt ggcagcgtat gacaagaaac
      961 agcagaaaat ggagttcttt gatccctcta gagctcaaga ttttcttttc atttccggta
     1021 ccaagatgcg aacacttgca aagaacaaaa aaaacccgcc agatggattt atgtgccctg
     1081 gtggttggga agtgttagtt gaatactatg acagtttggc tgcaaacgaa tcagggagag
     1141 ttcctcaacc aatccttgct tgagtcgtcg ttgtagatgt gcggcataca agcaagcaag
     1201 catggaccga aaccagaata tgtcccggcc agcttcgata tccaggatta tgctgagttt
     1261 tggtatgtta aaagatcaat gctttaaatt gtttggtatg cagtgtggat tgtttttgta
     1321 agaaaatgat tgctacttat ctgaataagt cgaggcgcat tactagcctc catgtataaa
     1381 gtcttgtgct ggttcttgtg cacattgtaa catattgtag tttttgtgct tttgacgcgg
     1441 tatatacttg ggtttgaaac acattatcgt ttatctcaga tgtatgtttt actcaaa
//
LOCUS       XR_011757022             509 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839665), ncRNA.
ACCESSION   XR_011757022
VERSION     XR_011757022.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..509
                     /gene="LOC139839665"
                     /note="uncharacterized LOC139839665; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839665"
     ncRNA           1..509
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839665"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839665"
ORIGIN      
        1 ctttagtaac tgagatgtgt atttattcga tgccaaataa gttgcactgg caaaacacag
       61 agagttaatg agtatatata cgaccagatg atgaagcaaa ctggtggtca accatcaatg
      121 gcatcataag agaatactga ttggtatggc gatttgttca tcatgaacat aaggaacggt
      181 tatagaacaa taacaatgaa gcttagatat attgttttgg tttccaaccg ttgaccagga
      241 caagatggta gtgatgaagc tggtagtgct aacaatcttg aagatgaagc agcaacctat
      301 aacataaagt atcttaccag tagtaatcta atgggtcttg cggaataaat tctatgttaa
      361 tgaatcattt gaattacttt taatatcgat cacactcatc tttttacatt ttttggtctt
      421 caataggtga aggatccaag tttttgacgt catattctta ttcagtacct aattttgttc
      481 gattatctaa aggttgttcg attggttca
//
LOCUS       XM_071829797            1827 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            PMT14 (LOC139839666), mRNA.
ACCESSION   XM_071829797
VERSION     XM_071829797.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1827
                     /gene="LOC139839666"
                     /note="probable methyltransferase PMT14; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 69 Proteins"
                     /db_xref="GeneID:139839666"
     CDS             16..1608
                     /gene="LOC139839666"
                     /codon_start=1
                     /product="probable methyltransferase PMT14"
                     /protein_id="XP_071685898.1"
                     /db_xref="GeneID:139839666"
                     /translation="MFKPCDVKYTDYTPCHEQDRAMRFPREEMVYRERHCPPQEEKLK
                     CLIPAPRGYSTPFPWPKGRDYVHYANVPYKHLTVEKANQHWVEFQCNVFKFPGGGTMF
                     PQGADAYIDELAKVIPIADGSVRTALDTGCGVASWGAFLMKRNVLAMSFAPRDNHEAQ
                     VQFALERGVPAIVGVLGSISLPFPARAFDMAQCSRCLIPWGEYNGKYLMEVDRVLRPG
                     GFWILSGPPINWKTYYQTWKRSKEDLKAEQTKIEKLAESLCWEKKYEKGDTAIWRKKV
                     NAESCKMNSENFCPTSDADNVWYKKMETCVTPYPKVKSTNEVAGGELKKFPARLQAVP
                     PRISKGLIPDVSIESYQENSKLWKTYVATYKRINRLIGTSRYRNIMDMNAGLGGFAAA
                     IDSNKLWVMNVVPTIAPNTLGVVYERGLIGIYHDWCEGFSTYPRTYDLIHGNGVFSLY
                     ENKCDLEDILLEMDRILRPEGSVILRDEVDVLTKVMKITSGMRWNVKLHDHEDGPFVP
                     KKIFVASKQYWVASKNNDTSSE"
     misc_feature    46..1563
                     /gene="LOC139839666"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; Region: Methyltransf_29; pfam03141"
                     /db_xref="CDD:335237"
     polyA_site      1827
                     /gene="LOC139839666"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaccaaaag caaaaatgtt caaaccgtgt gacgtaaaat acaccgatta tacgccgtgc
       61 catgaacaag atcgagctat gaggttcccg agagaagaaa tggtgtacag agaaagacat
      121 tgtcctcctc aagaggaaaa gttgaagtgt cttattccag ctccgagagg ttattcgact
      181 ccgtttccgt ggccgaaagg tcgtgattat gttcattatg cgaatgttcc ttataagcat
      241 ttgactgttg agaaagccaa tcaacattgg gtggagtttc agtgtaatgt gtttaagttt
      301 ccgggtggtg ggaccatgtt tccacaagga gcagatgcgt atattgatga gctggcaaag
      361 gtgattccga ttgctgatgg gtcagttaga acggctctgg ataccggttg tggggttgcg
      421 agctggggtg cgttcctgat gaagagaaat gttttagcca tgtcatttgc gcctcgggac
      481 aatcatgaag cacaagtgca gtttgcttta gaacgcggtg tccctgctat tgttggtgtt
      541 cttggatcaa taagtcttcc ttttccagct agagcatttg atatggctca gtgttctcgg
      601 tgtttaatac catggggcga atacaatggg aaatatttaa tggaagttga tcgagttctt
      661 aggcccggtg ggttttggat tttgtctggg cctccaatca attggaagac ttattaccag
      721 acgtggaaac ggtcaaaaga agatttgaaa gcagaacaaa caaagattga aaagcttgct
      781 gaatctcttt gttgggagaa gaaatatgag aagggagata ctgcaatttg gagaaaaaaa
      841 gtcaacgctg aatcctgtaa aatgaattct gaaaatttct gcccaacgag tgatgccgat
      901 aatgtttggt acaagaaaat ggaaacatgt gtaactccgt acccaaaagt caaaagcaca
      961 aacgaagtag caggaggtga gttaaagaag tttcctgcaa ggcttcaggc ggtgccacct
     1021 cgcatatcca aaggactaat tccagatgtt tctattgaaa gttatcaaga aaatagtaaa
     1081 ctttggaaga cgtatgttgc tacttacaaa cgcatcaacc gattaattgg gacttcaagg
     1141 tatagaaaca ttatggatat gaatgctggc cttggaggtt ttgctgcagc tattgactct
     1201 aataaattat gggtgatgaa tgttgtgccc accattgctc caaacacatt gggagttgta
     1261 tatgagcgtg gtctaatcgg tatatatcat gattggtgtg aaggcttctc gacttaccca
     1321 agaacatacg accttattca cgggaatggt gtattcagct tgtacgagaa caaatgcgat
     1381 ctggaagaca tcctactaga aatggaccgg attttgagac ccgaaggttc agtcatcctt
     1441 cgagatgaag tagacgtgtt aaccaaggtg atgaaaataa cgtccggcat gagatggaat
     1501 gttaagttgc atgatcatga agatggacct tttgtcccca agaaaatttt cgtggcctcc
     1561 aaacaatatt gggttgccag caaaaacaac gatacatcga gcgagtgatt aattaagtag
     1621 tcggtcgtta tattattttg tgtcaacaaa gttgtcctta tatcgtgcca ctccctaaac
     1681 cagatttttc gaaagttgaa tagttgcatt cgttgatagg ttacaaatgg aacattaagt
     1741 gcacatcttt gttggtaaaa tatgtttagt gtttcacaga cctttttatg ttatttctta
     1801 tttaatgtga aagctttgta aaattca
//
LOCUS       XM_071829798            2276 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            PMT14 (LOC139839667), mRNA.
ACCESSION   XM_071829798
VERSION     XM_071829798.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2276
                     /gene="LOC139839667"
                     /note="probable methyltransferase PMT14; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 65 Proteins"
                     /db_xref="GeneID:139839667"
     CDS             225..2057
                     /gene="LOC139839667"
                     /codon_start=1
                     /product="probable methyltransferase PMT14"
                     /protein_id="XP_071685899.1"
                     /db_xref="GeneID:139839667"
                     /translation="MGSKNNPANRRRSPLSIIIVFGLCCFFYLLGTWQKSGFGKGDKI
                     AMDITKKTECEDDFATLDFNPHHNIPIPDTSKPKAKMFKPCDVKYTDYTPCHEQDRAM
                     RFPREEMVYRERHCPPQEEKLKCLIPAPRGYSTPFPWPKGRDYVHYANVPYKHLTVEK
                     ANQHWVEFQGNVFKFPGGGTMFPQGADAYIDELAKVIPIADGSVRTALDTGCGVASWG
                     AFLMKRNVLAMSFAPRDNHEAQVQFALERGVPAIVGVLGSISLPFPARAFDMAQCSRC
                     LIPWGEYNGKYLMEVDRVLRPGGFWILSGPPINWKTYYQTWKRSKEDLKAEQTKIEKL
                     AESLCWEKKYEKGDTAIWRKKVNAESCKMNSENFCPTSDADNVWYKKMETCVTPYPKV
                     KSTNEVAGGELKKFPARLQAVPPRISKGLIPDVSIESYQENSKLWKTYVATYKRINRL
                     IGTSRYRNIMDMNAGLGGFAAAIDSNKLWVMNVVPTIAPNTLGVVYERGLIGIYHDWC
                     EGFSTYPRTYDLIHGNGVFSLYENKCDLEDILLEMDRILRPEGSVILRDEVDVLTKVM
                     KITSGMRWNVKLHDHEDGPFVPKKIFVASKQYWVASKNNDTSSE"
     misc_feature    495..2012
                     /gene="LOC139839667"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; Region: Methyltransf_29; pfam03141"
                     /db_xref="CDD:335237"
     polyA_site      2276
                     /gene="LOC139839667"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catattcatt gatgattgat gattgtttga ttctccaaat aatataaaaa ccgcagatat
       61 ttcacactct atcaaagctt acttatttcc cccatctttc tctcttaaat accgagtaac
      121 tacttattga tgtgaaaatt ggagcaaata aaaagctaaa ttgaagccaa gatctgcatt
      181 tcaatcgatc agttattttt aggccaaagg ttctaaacta ttagatgggg tctaagaaca
      241 atccagcaaa cagaagaaga agtccgttat ctataattat agtcttcggg ctctgttgtt
      301 tcttttactt actaggaaca tggcaaaaaa gtggttttgg aaaaggggac aagatagcaa
      361 tggacataac aaagaaaaca gaatgtgagg atgattttgc caccctcgat ttcaacccgc
      421 atcacaatat tccaattcca gatacttcca aaccaaaagc aaaaatgttc aaaccgtgtg
      481 acgtaaaata caccgattat acgccgtgcc atgaacagga tcgagctatg aggttcccga
      541 gagaagaaat ggtgtacaga gaaagacatt gtcctcctca agaggaaaag ttgaagtgtc
      601 ttattccagc tccgagaggt tattcgactc cgtttccgtg gccgaaaggt cgtgattatg
      661 ttcattatgc gaatgttcct tataagcatt tgactgttga gaaagccaat caacattggg
      721 tggagtttca gggtaatgtg tttaagtttc cgggtggtgg gaccatgttt ccacaaggag
      781 cagatgcgta tattgatgag ctggcaaagg tgattccgat tgctgatggg tcagttagaa
      841 cggctctgga taccggttgt ggggttgcga gctggggtgc gttcctgatg aagagaaatg
      901 ttttagccat gtcatttgcg cctcgggaca atcatgaagc acaagtgcag tttgctttag
      961 aacgcggtgt ccctgctatt gttggtgttc ttggatcaat aagtcttcct tttccagcta
     1021 gagcatttga tatggctcag tgttctcggt gtttaatacc atggggcgaa tacaatggga
     1081 aatatttaat ggaagttgat cgagttctta ggcccggtgg gttttggatt ttgtctgggc
     1141 ctccaatcaa ttggaagact tattaccaga cgtggaaacg gtcaaaagaa gatttgaaag
     1201 cagaacaaac aaagattgaa aagcttgctg aatctctttg ttgggagaag aaatatgaga
     1261 agggagatac tgcaatttgg agaaaaaaag tcaacgctga atcctgtaaa atgaattctg
     1321 aaaatttctg cccaacgagt gatgccgata atgtttggta caagaaaatg gaaacatgtg
     1381 taactccgta cccaaaagtc aaaagcacaa acgaagtagc aggaggtgag ttaaagaagt
     1441 ttcctgcaag gcttcaggcg gtgccacctc gcatatccaa aggactaatt ccagatgttt
     1501 ctattgaaag ttatcaagaa aatagtaaac tttggaagac gtatgttgct acttacaaac
     1561 gcatcaaccg attaattggg acttcaaggt atagaaacat tatggatatg aatgctggcc
     1621 ttggaggttt tgctgcagct attgactcta ataaattatg ggtgatgaat gttgtgccca
     1681 ccattgctcc aaacacattg ggagttgtat atgagcgtgg tctaatcggt atatatcatg
     1741 attggtgtga aggcttctcg acttacccaa gaacatacga ccttattcac gggaatggtg
     1801 tattcagctt gtacgagaac aaatgcgatc tggaagacat cctactagaa atggaccgga
     1861 ttttgagacc cgaaggttca gtcatccttc gagatgaagt agacgtgtta accaaggtga
     1921 tgaaaataac gtccggcatg agatggaatg ttaagttgca tgatcatgaa gatggacctt
     1981 ttgtccccaa gaaaattttc gtggcctcca aacaatattg ggttgccagc aaaaacaacg
     2041 atacatcgag cgagtgatta attaagtagt cggtcgttat attattttgt gtcaacaaag
     2101 ttgtccttat atcgtgccac tccctaaacc agatttttcg aaagttgaat agttgcattc
     2161 gttgataggt tacaaatgga acattaagtg cacatctttg ttggtaaaat atgtttagtg
     2221 tttcacagac ctttttatgt tatttcttat ttaatgtgaa agctttgtaa aattca
//
LOCUS       XR_011757023             582 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839668), ncRNA.
ACCESSION   XR_011757023
VERSION     XR_011757023.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..582
                     /gene="LOC139839668"
                     /note="uncharacterized LOC139839668; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839668"
     ncRNA           1..582
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839668"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839668"
ORIGIN      
        1 aagacctaaa tcttttccta tttttctttt tatgtcttta tctctctgta tcaaagataa
       61 accctaaatc cacccttcat gtatctttgc ttgtcgcctt aaatatcttt aattttctgt
      121 atcaaaccac ctaacagctc cattttttct cattttgttt cctttactaa atctgctcta
      181 gatgcgcctt ttccggcatc cggaagcttg ccggacgtcc gatgacctct tttttatggt
      241 ttgcttgtcc ttttctcagc tcgctagtgt gtcgggtgtt gtattccttc gatggaggtg
      301 gattgcggtg gttgcaggag gtgtatggtg gtggtaaact cagttctgct ggtgtaaatg
      361 gaatgcttgt cattatggag acttggagag tgctggaccc aaaatgaatg gtttgattaa
      421 caaatttcca atgaggcggt tgatgttagg atcacccagg gggatttaac ctcccacacg
      481 ttcatctctt acacatttat acccgccccc aactgcgtgt tcaggaggaa acccgcacca
      541 atcccatacg gggcatggac gttaaaaccc cctctccttt ac
//
LOCUS       XM_071829799            2786 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DEAD-box ATP-dependent RNA
            helicase 3, chloroplastic-like (LOC139839669), mRNA.
ACCESSION   XM_071829799
VERSION     XM_071829799.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2786
                     /gene="LOC139839669"
                     /note="DEAD-box ATP-dependent RNA helicase 3,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 Proteins"
                     /db_xref="GeneID:139839669"
     CDS             102..2441
                     /gene="LOC139839669"
                     /codon_start=1
                     /product="DEAD-box ATP-dependent RNA helicase 3,
                     chloroplastic-like"
                     /protein_id="XP_071685900.1"
                     /db_xref="GeneID:139839669"
                     /translation="MACSSSIIGLVPSIYHKNPPSVDQITRTPLHLPRSTNFTFSKAV
                     ARIKHAAAGGGSGFVTSATATPNSILSEKAFKGLGVFDEDSDRDYDDGGSETEEGLVT
                     ESDGVNSDEDDDDELAITKLGLPQRLVQSLEKREITKLFPIQRAVLVPALEGRDIIAR
                     AKTGTGKTLAFGIPIIKRLTEDDEERISPRCAQRLPRMLVLAPTRELARQVETEIKES
                     APYLSTVCVYGGVSYTSQQNAISRGVDVVVGTPGRLIDLIGSNSLKLSEVQFLVLDEA
                     DQMLAVGFEEDVEHILEKLPAERQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDE
                     KLAEGIKLYAIPTTSTSKRTILADLVTVYAKGGKTIVFTQTKRDADEVSLALTSSITS
                     EALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDAETFV
                     HRSGRTGRAGKEGRAILMFTNSQRRTIRSLERDVGCKFEFVGPPSVEDVLESSAQQVV
                     ATLAGVHQESVAFFTPTAEKMIEEQGASALAAALAQLSGFSKPPSSRSLITHEQGWTT
                     LQLTRDPALSRGFMSARTVTGFLADVYATAADELGKIHIIADEQVQGAVFDLPEEIAK
                     KLLDKDMPPGNTVTKVTKLPMLQDDGPAGDFYGRFSNRERSSRGAGSRRGGSSGSRGG
                     GWGGSRFSSDDGGDNYRRGGRSGGSSWSRGGSSSGSRIGGGGSDWLIGERRSSRSPSF
                     GTSGSGSSSRTRDRNFDGACFNCGRSGHRASECPKKQDY"
     misc_feature    459..1661
                     /gene="LOC139839669"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; Region: SrmB; COG0513"
                     /db_xref="CDD:440279"
     misc_feature    1761..2003
                     /gene="LOC139839669"
                     /note="RNA-binding GUCT-like domain found in Thermus
                     thermophilus heat resistant RNA-dependent ATPase (Hera)
                     and similar proteins; Region: GUCT_Hera; cd12938"
                     /db_xref="CDD:240595"
     misc_feature    2373..2426
                     /gene="LOC139839669"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
     polyA_site      2786
                     /gene="LOC139839669"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gccaacaagg tgatagtcat acaaaggcca tacaatcaat aaacctctca ccttatccct
       61 ccaaaatacc acccttcaat ttcatcaaaa accctcattt catggcttgc tcatcttcaa
      121 tcataggcct tgttccttca atctaccaca aaaatccacc atctgtagac caaattacca
      181 gaaccccttt acaccttcct cgttctacta atttcacttt ttcaaaagct gtagctagaa
      241 tcaaacatgc tgctgctggt ggtgggtccg ggtttgttac atcagctacc gcaacgccga
      301 attcgatatt aagtgagaag gcttttaagg gtttgggtgt gtttgatgaa gatagtgata
      361 gagattatga tgatggtggg tctgaaactg aagaagggtt agttactgaa agtgatggtg
      421 taaatagtga tgaggatgat gatgatgaac ttgctattac taaattgggt ttgcctcaaa
      481 gattggttca gtctcttgaa aaaagagaaa ttactaaact ttttccaatt caaagagctg
      541 tattggttcc tgcactagaa ggtagagata ttattgcgcg tgccaaaact ggaacaggga
      601 agacgttagc ttttggtatt cccatcatta aaagactcac cgaagatgat gaagaaagaa
      661 tatctcctag gtgtgcgcaa cggcttccta gaatgttggt gcttgcacct acaagggaat
      721 tggctagaca agtagaaacc gagattaaag agtccgcccc gtatctgagc accgtttgtg
      781 tgtatggtgg tgtctcgtat acgtcgcaac aaaatgcaat atcgcgtggg gtcgatgtag
      841 tggtcggtac accaggaaga cttattgatc ttattggaag taacagccta aaattgagtg
      901 aggttcagtt cttggttctt gatgaagctg atcaaatgct tgctgttggt tttgaggaag
      961 atgtcgaaca tattttagag aagcttccag ctgagaggca gagtatgctt ttttccgcaa
     1021 caatgccggg ttgggtcaag aaactttcga ggaagtattt aaacaatcca ttgacgattg
     1081 atttggttgg tgatcaagac gaaaagctag cagagggcat caagctgtat gctattccta
     1141 caacctcaac ttctaagcgg acaatacttg ctgaccttgt cacggtatat gcaaagggcg
     1201 ggaagaccat tgttttcact cagacaaaac gggatgcaga tgaggtctct ttagcattga
     1261 ctagtagtat tacttcagaa gcattacacg gtgatatatc tcaacatcaa agggaaagaa
     1321 cattgaatgg ttttagacaa gggaagttta ccgtgcttgt tgctactgat gttgcttctc
     1381 gtggacttga tatacccaat gtcgatttgg tgatccacta tgaactgcca aacgatgcgg
     1441 aaacttttgt gcaccggtct ggtagaacag gacgtgcagg aaaagaaggc agagctattt
     1501 tgatgttcac gaatagtcaa cggagaacaa ttcgatctct tgaacgtgat gtaggatgca
     1561 aatttgagtt tgtgggccct ccatctgtag aagatgtatt ggagtcttcg gctcagcagg
     1621 ttgtagccac actcgcaggt gttcatcagg aatcggtggc gttcttcact ccaactgctg
     1681 aaaaaatgat cgaagaacag ggggcaagtg cccttgctgc tgcccttgca caactgagcg
     1741 ggttctcaaa gcccccatca tcccgttctc ttattacaca cgagcaggga tggactacgt
     1801 tgcaacttac tcgagatccg gctttatcaa gagggttcat gtcagctaga accgttactg
     1861 gattcttggc tgatgtttat gcaaccgctg ctgatgaact cggaaaaata catatcattg
     1921 cagatgaaca ggtccaagga gcggtctttg atcttcctga ggagattgcc aagaagcttc
     1981 tagataagga catgccacct ggcaatactg ttacaaaagt tacaaagttg ccgatgttgc
     2041 aagatgatgg tccagcgggt gacttttatg gtaggttttc taacagggag agaagttcga
     2101 ggggggcagg ttcgagaagg ggaggttcca gtgggtcacg tggtggtggt tggggtggta
     2161 gtcgattttc ttcagatgat ggcggggata attacaggcg aggcggtagg agtggcggca
     2221 gtagttggtc cagagggggt tcgagttccg gctctagaat cggtggtggt ggaagtgatt
     2281 ggctaattgg tgaaagacga tcttcacgat caccctcgtt cgggactagc ggttcgggtt
     2341 cttcatctcg gactagggac agaaattttg atggtgcatg cttcaactgt ggacgatccg
     2401 gccacagggc atccgaatgc cctaagaaac aagattacta gtttctgttt gttcgcctac
     2461 acgttcatac atctgtttta gccattgctg ctccgtttaa agaaggtctg gaggctgcca
     2521 gctgtacctg gcttcggtaa aagcttcgaa agatgacaat ggcatacatg ttggatgcta
     2581 caagaagctg aatgtaaggt ctttatctag tttaggtagc cagcaccttt accaaataca
     2641 gtagttcaac agcatttttg atgtcattat tttactcaaa tgttatcaca gtggattgcc
     2701 tttttctttt gtaactagtt caaggacccg tggtaacacg ggtttgttaa acgaaaattg
     2761 atgaatagca tcttataatt gataaa
//
LOCUS       XR_011757024             231 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839670), ncRNA.
ACCESSION   XR_011757024
VERSION     XR_011757024.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..231
                     /gene="LOC139839670"
                     /note="uncharacterized LOC139839670; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839670"
     ncRNA           1..231
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839670"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839670"
ORIGIN      
        1 gtattttaca tctcaaattt aacaggcgtc taacccaatt acaattacaa tcctaaatcc
       61 taataaggtt aaattggcat acagttccaa actaatttaa caaggagatc gatccatctg
      121 gattcgcaga gttgtggatt tctcatttct cagctccact gacgaatcgt gaagagtaag
      181 taagtatcta aggatgacaa cagttaacac aactacagat ctacctgata a
//
LOCUS       XM_071829800            3974 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839672), mRNA.
ACCESSION   XM_071829800
VERSION     XM_071829800.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3974
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3974
                     /gene="LOC139839672"
                     /note="uncharacterized LOC139839672; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839672"
     CDS             169..3639
                     /gene="LOC139839672"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685901.1"
                     /db_xref="GeneID:139839672"
                     /translation="MHISNPDKSVVHPTHKHDSNNDDDDDCISNLTSDNIPVEREEEL
                     EDDDCTETVNIEEEEELKDHCISTVTENSETENIEEEDEELKDDCTSALTEITETDKF
                     ESAIDATGKTLDLQVLDGDNDTIEGLYVYKNIFNLIPRSVGGLSKLKTLKFFGNEVNL
                     FPSEFGNLVDLERLHVKISLPGLTGLPLQKLKALKELELSTAPARPSAFPLLADIMGL
                     VCLTKLSVCHFSIRLLPPEIGCLTCLEYLDLSHNKMKNLPTEISSLCALLTLKVANNK
                     LVQVPSLSSLQRLENLDLSNNRLTSLSSIALDKMAKLQRLNLQHNKLSSSIQLPLGTK
                     CDLEGNDEVMTNDDSFSSPVEMDVLESTDTNLHDDSINGPPALSTFSTGSSSSRYILA
                     RKPRKGWKRRYHLQQRARQGRLSYGRKLRGDDSTQSTRRNCDSCDDVIPSESILEGSS
                     INVDADLDNEELAEDGAKHVDAHGSGCVVVESIKGKNVKDDCIKHNAALGSLLDPIKA
                     EDEHLLVDKFCGNKHSRRYSESIKKTEHPKKRRLIEQCLDMSHKYSTMSFCSIDDHLP
                     DGFYDAGRDRPFLPLIRYENNLHIGSREVIVMDRERDEELDAVTLCAKTLLSHLNHNH
                     GFNKDEGDNCLNSLQIAYMLAQFVSDHFGGSDRSTMVDRARKSASGSSYNKPFICTCP
                     TGNNDNILKPAKHSINTLEDAVLFGLCEKSLQLLKARRNSNIVPIGSLQFGVCRHRAL
                     LMKYLCDRVKPRVPCELVRGYLDFAPHAWNVVIVKRGDSEIRMVVDACRPHDIREEMD
                     PEYFHRYIPLNRINFDASPDVDSSFPVLSARDQIEEGGSATLIRCNLNSNEAVAKVHT
                     LEVNGSSINEVRNFEFKCLGEVRLLSVFNHPCIVNILGHQISNKWLPSQNGAPEHRIL
                     QSAIFMEHVKGGSLKHYLEKLARSGEKHVPLELALQISKDIAWALSEVHSKDVIHRDL
                     KSANILIDLVEESDGTPIVKLCDFDRAVPLRSPLHTCCIGHMGVHPPNVCVGTPRWMA
                     PEVYRTMHDPRLYGLEVDVWSFGCLILELLTLQVPYAELPESEIHNLLSMGKRPLLTD
                     ELEAMGPAEDTQVTISQSKTEEYKKEKMLRFLIDIYRQCTKEDPNDRPTAEKLYHILR
                     DFSSSSSAQV"
     misc_feature    478..>1143
                     /gene="LOC139839672"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     Region: LRR; COG4886"
                     /db_xref="CDD:443914"
     misc_feature    550..609
                     /gene="LOC139839672"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    610..678
                     /gene="LOC139839672"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    748..828
                     /gene="LOC139839672"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    829..897
                     /gene="LOC139839672"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    898..966
                     /gene="LOC139839672"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    967..1032
                     /gene="LOC139839672"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1033..1104
                     /gene="LOC139839672"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1813..2526
                     /gene="LOC139839672"
                     /note="Ethylene-responsive protein kinase Le-CTR1; Region:
                     EDR1; pfam14381"
                     /db_xref="CDD:433922"
     misc_feature    2656..3591
                     /gene="LOC139839672"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2662..2673,2680..2682,2686..2688,2722..2724,
                     2731..2733,2836..2838,2926..2937,3079..3081,3091..3096,
                     3100..3102,3148..3153)
                     /gene="LOC139839672"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 ccccgtcttc tccgaaatta gggttcctgc tcccaaagcc gatttcccca aaacctcaat
       61 tcacgattta tgcaaataca tatatttata taccggcact tcattaattc gattcaattc
      121 acgattcttt ctttaattca aactccaaac cctagctaaa tttttacaat gcatatctca
      181 aatccagaca aatcagtcgt tcatccaact cataagcatg atagtaacaa cgatgatgat
      241 gatgattgca tctcaaacct aacctccgat aacatccccg tagaacgaga agaagaatta
      301 gaagatgacg attgcaccga aacggtaaac atcgaagaag aggaagaatt gaaagatcat
      361 tgtatatcta ccgtaaccga aaactcggaa accgaaaaca tcgaagaaga agatgaagaa
      421 ttgaaagacg attgcacctc tgctctaact gaaataactg aaactgataa atttgaatca
      481 gcaattgatg ctaccggaaa aactttggat ctgcaggttt tagatggcga taatgacaca
      541 attgaaggtt tatatgtgta caagaatata tttaatttga ttcctaggtc agttgggggt
      601 ttaagtaagt taaaaacctt gaagttcttt ggcaatgagg tgaatttgtt tccttcagag
      661 tttgggaatt tggttgattt agaaagattg catgtcaaga tatctttacc aggcttgact
      721 ggtctgcctt tacaaaagtt gaaggcttta aaggaattag agcttagcac agcacctgct
      781 aggccttctg catttccatt attggctgat atcatggggc ttgtatgttt gactaagcta
      841 tctgtttgtc acttttcgat aagattgttg cctccagaaa ttggttgtct tacttgcttg
      901 gagtacctag atctttcgca caataaaatg aaaaatttac caactgaaat aagtagtttg
      961 tgcgcattgt tgacgttgaa ggtcgccaac aacaagttgg tccaagtacc atccttgtct
     1021 tctctccaaa gattggagaa cctggacctt tcaaacaaca ggttgacatc attgtcatct
     1081 attgcgcttg acaaaatggc gaagcttcag agactaaatc ttcagcacaa taagctatca
     1141 agttctatac aattacccct ggggacgaag tgtgatcttg aggggaatga tgaagttatg
     1201 acaaatgatg actctttcag ttcacctgta gagatggatg tattggaaag cactgacaca
     1261 aatcttcatg atgattccat taatggccct cctgcattgt caacgttttc aactggatcc
     1321 tcatcaagta gatatattct agcaaggaaa cctagaaaag gttggaaaag gcgttaccat
     1381 ttgcagcaga gagctcgtca aggacgttta agctacggtc ggaagttgag aggtgatgat
     1441 tcgactcaaa gtacaagaag aaactgtgac tcttgcgatg atgtgatccc ctctgaaagt
     1501 attctagaag gatcatcaat caacgttgat gctgacctgg ataatgaaga actcgctgaa
     1561 gatggtgcga aacatgttga tgcacatggc tctggatgtg ttgtagttga atctatcaag
     1621 ggtaaaaacg taaaagatga ttgtatcaag cacaatgctg cactgggttc tcttctagat
     1681 cctattaagg ccgaagatga gcacttgtta gtggataaat tttgtggtaa taaacattca
     1741 agaagatact ctgaaagtat taagaaaaca gaacatccga agaaaaggag actaattgaa
     1801 caatgtttag atatgtccca taaatacagt acaatgtcgt tttgtagcat tgatgaccat
     1861 ctgccagatg gattttatga tgctggaaga gatcgacctt tcttacctct cattaggtat
     1921 gaaaacaact tgcatattgg ctcgcgtgaa gttattgtaa tggacaggga aagggatgaa
     1981 gagttggatg ctgtaacact ctgcgcaaaa acattattat ctcatttaaa tcataaccat
     2041 ggtttcaaca aagatgaagg cgataattgt cttaatagtt tgcagattgc ttatatgctt
     2101 gctcaatttg tatcagatca ctttggaggg agtgacagaa gtacaatggt tgacagggca
     2161 cgtaagtctg catctggatc aagttataac aagcctttca tttgcacttg tcccactggg
     2221 aacaacgata atatcttgaa acctgcaaaa catagcatta ataccttaga ggatgctgtt
     2281 ctctttggtc tttgtgaaaa atctcttcaa ttgctaaaag caaggagaaa ttcaaatatc
     2341 gtcccgattg gaagtcttca atttggtgtt tgtaggcaca gggcattgct aatgaagtac
     2401 ctttgtgacc gtgtgaagcc tcgagttcca tgtgaacttg taagagggta tttggatttt
     2461 gctcctcatg cttggaacgt agttattgtt aagagaggtg attcggaaat tcggatggtc
     2521 gtcgatgcat gtcgtcctca tgatataagg gaagagatgg accccgaata ttttcacagg
     2581 tacattcccc ttaaccggat taattttgat gcaagtcctg atgtcgactc ttcttttcca
     2641 gttctttctg cacgtgatca aatcgaggaa gggggttcgg caacccttat cagatgcaac
     2701 ctcaattcaa acgaggctgt tgctaaggta cataccttgg aagtcaacgg gagctcaatc
     2761 aatgaagtta ggaattttga atttaagtgc ctaggggagg ttagactctt aagcgtcttc
     2821 aatcatccat gtatcgtaaa cattttgggt catcagatat ctaacaagtg gttgccatcg
     2881 caaaatggag caccagagca tcgtatattg cagtctgcca tatttatgga acatgtaaaa
     2941 ggaggttctt taaagcatta tttagagaag ctagcaagat cgggtgaaaa gcacgttcct
     3001 ttggaattgg ctttgcaaat aagtaaagat attgcatggg ctctatctga ggtccactcc
     3061 aaagatgtga tacatcggga cttgaagagt gcaaacatat tgattgacct tgttgaagaa
     3121 tctgatggaa caccgattgt taagctatgt gattttgata gagcggttcc tttacgttct
     3181 ccattgcata catgctgtat cggccatatg ggagtacacc cacctaatgt ttgtgttgga
     3241 acgcctcgtt ggatggcccc tgaagtttat cggacaatgc atgacccacg tttatatgga
     3301 ctggaagtag atgtatggtc tttcggatgc ctaattcttg agttgttgac tttacaagtg
     3361 ccttatgctg agttgccaga gtctgaaatt cacaacctcc tatctatggg taaacgacca
     3421 ctgttgacgg atgaattaga ggccatgggt ccagcggaag atactcaagt gactatatct
     3481 caatctaaga cagaggaata caaaaaagaa aaaatgttga ggtttttaat tgatatttat
     3541 cggcaatgta ccaaggaaga tccaaatgat cgtccaacag cagagaaact ttaccatatt
     3601 ctacgtgatt tctcaagttc aagtagtgca caagtataga gtttgattgt ttcggctagg
     3661 attttaggtt ataattattg tacgtgtatt agtagtcgct aatgtatcgc ttgtatcttt
     3721 gttgtaattt ctttccgggg tattggagcc caggtgaagt caattatgaa tcagggttat
     3781 ttatgtttca gaaactacta ttcattttta ttagttttat gttaggatga gtaaacaaca
     3841 ttaacgttgg catgttgtat caggtgtaat gttagttatt ttagtctaaa gaaactctgt
     3901 tcaaaaggtg tttgatatag tgctgaatta aggtatgctg taatatagtg ctccaggaca
     3961 tttaattgaa taaa
//
LOCUS       XM_071829801             947 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides acireductone dioxygenase
            1-like (LOC139839673), mRNA.
ACCESSION   XM_071829801
VERSION     XM_071829801.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..947
                     /gene="LOC139839673"
                     /note="acireductone dioxygenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139839673"
     CDS             171..737
                     /gene="LOC139839673"
                     /codon_start=1
                     /product="acireductone dioxygenase 1-like"
                     /protein_id="XP_071685902.1"
                     /db_xref="GeneID:139839673"
                     /translation="MANLQAWFMDDSHVDPQLPHHKNPHELVSPEYLADLGVLHWKLN
                     PEKYEDDEELEKIRATRGYNYMDLLDLCPEKVENYEQKLKNFYTEHIHADEEIRYCLE
                     GSGYFDVRDKNDRWIRIWIKAGDLIILPAGIYHRFTLDTSNYIKLMRLFVGEPVWTAF
                     NRPQEEHPARKTYKINFGQKIGMPLEAH"
     misc_feature    261..647
                     /gene="LOC139839673"
                     /note="acireductone dioxygenase (ARD), cupin domain;
                     Region: cupin_ARD; cd02232"
                     /db_xref="CDD:380360"
     misc_feature    order(426..428,438..440,444..446,456..458,462..464,
                     573..575)
                     /gene="LOC139839673"
                     /note="active site"
                     /db_xref="CDD:380360"
     polyA_site      947
                     /gene="LOC139839673"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacaataaat caccggaaac tgatgaccac aggtggcata acaatcttcc aaaacaatac
       61 aaccaacaaa cttgaaactt ccagaatccc cacaccgata taaacataca tttccgattc
      121 aaacaatttg atatatttaa ataatacctg ttttatttat tataattcct atggcgaatc
      181 ttcaagcatg gtttatggat gatagccacg tggatccaca gcttcctcat cataagaatc
      241 cacatgagct tgtttcacct gaatacttag ctgatttggg tgttttgcac tggaagttga
      301 atccagaaaa gtatgaggat gatgaagaat tagagaagat tagggctact agaggttaca
      361 attacatgga tctgctggat ttatgccctg agaaagtgga aaactatgag caaaaactga
      421 agaacttcta tacagagcat attcatgcag atgaagaaat acgttattgt ttagaaggga
      481 gtgggtattt tgatgttcgg gataaaaatg atcgctggat tcgcatttgg atcaaggccg
      541 gtgatctcat tatcttgcct gcaggaatat accatcgctt caccctcgat acctccaact
      601 atatcaagtt gatgaggtta tttgttggag agccagtatg gactgcattc aacaggccac
      661 aagaggagca tccggcgagg aaaacgtaca agattaactt tggtcaaaag attgggatgc
      721 cccttgaagc tcattgaacc gtacatgtgc ctttataaat atgttaaatg ataagtactg
      781 cggagtatat aattatcgaa atagctgcac ttgccatata catgtattcg aaggtcatat
      841 gttatgtatc ctctgttgga tctgaatctt gactgtaaag ttcaaattgt actatttata
      901 gctcgaataa agtttataag gaccctatga gcccttatga aaaagaa
//
LOCUS       XM_071829802             824 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ras-related protein
            RABF1-like (LOC139839674), mRNA.
ACCESSION   XM_071829802
VERSION     XM_071829802.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..824
                     /gene="LOC139839674"
                     /note="ras-related protein RABF1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 37 Proteins"
                     /db_xref="GeneID:139839674"
     CDS             39..638
                     /gene="LOC139839674"
                     /codon_start=1
                     /product="ras-related protein RABF1-like"
                     /protein_id="XP_071685903.1"
                     /db_xref="GeneID:139839674"
                     /translation="MGCSSSLPDRSVGRVGGLNPDNGDLDAKNLKIKLVLLGDSGVGK
                     SCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYY
                     RGAAVGVIVYDITNPDSFHKAQYWVKELQKHGSPDIVLALVGNKADLQEKREVSVQGG
                     MDYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPTPA"
     misc_feature    129..620
                     /gene="LOC139839674"
                     /note="Rab-related GTPase family includes Rab5 and Rab22;
                     regulates early endosome fusion; Region: Rab5_related;
                     cd01860"
                     /db_xref="CDD:206653"
     misc_feature    129..137
                     /gene="LOC139839674"
                     /note="Rab subfamily motif 1 (RabSF1); other site"
                     /db_xref="CDD:206653"
     misc_feature    150..173
                     /gene="LOC139839674"
                     /note="G1 box; other site"
                     /db_xref="CDD:206653"
     misc_feature    order(156..176,204..209,222..227,306..308,471..476,
                     480..482,561..569)
                     /gene="LOC139839674"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206653"
     misc_feature    order(174..209,219..224)
                     /gene="LOC139839674"
                     /note="Rab subfamily motif 2 (RabSF2); other site"
                     /db_xref="CDD:206653"
     misc_feature    order(204..206,219..245)
                     /gene="LOC139839674"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206653"
     misc_feature    order(219..221,231..254,276..278,282..284)
                     /gene="LOC139839674"
                     /note="putative GEF interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206653"
     misc_feature    225..227
                     /gene="LOC139839674"
                     /note="G2 box; other site"
                     /db_xref="CDD:206653"
     misc_feature    order(228..233,237..239,294..299,318..320,324..326,
                     330..338)
                     /gene="LOC139839674"
                     /note="putative GDI interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206653"
     misc_feature    228..242
                     /gene="LOC139839674"
                     /note="Rab family motif 1 (RabF1); other site"
                     /db_xref="CDD:206653"
     misc_feature    order(234..242,246..248,315..317,336..341)
                     /gene="LOC139839674"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206653"
     misc_feature    282..296
                     /gene="LOC139839674"
                     /note="Rab family motif 2 (RabF2); other site"
                     /db_xref="CDD:206653"
     misc_feature    297..308
                     /gene="LOC139839674"
                     /note="G3 box; other site"
                     /db_xref="CDD:206653"
     misc_feature    order(306..308,312..344)
                     /gene="LOC139839674"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206653"
     misc_feature    315..332
                     /gene="LOC139839674"
                     /note="Rab family motif 3 (RabF3); other site"
                     /db_xref="CDD:206653"
     misc_feature    339..344
                     /gene="LOC139839674"
                     /note="Rab family motif 4 (RabF4); other site"
                     /db_xref="CDD:206653"
     misc_feature    366..383
                     /gene="LOC139839674"
                     /note="Rab family motif 5 (RabF5); other site"
                     /db_xref="CDD:206653"
     misc_feature    447..464
                     /gene="LOC139839674"
                     /note="Rab subfamily motif 3 (RabSF3); other site"
                     /db_xref="CDD:206653"
     misc_feature    471..482
                     /gene="LOC139839674"
                     /note="G4 box; other site"
                     /db_xref="CDD:206653"
     misc_feature    561..569
                     /gene="LOC139839674"
                     /note="G5 box; other site"
                     /db_xref="CDD:206653"
     misc_feature    609..617
                     /gene="LOC139839674"
                     /note="Rab subfamily motif 4 (RabSF4); other site"
                     /db_xref="CDD:206653"
     polyA_site      824
                     /gene="LOC139839674"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatatatata taagtcagta gctgttgttt cactcaccat gggttgctcc tcctctctcc
       61 cagataggag tgtgggtcgc gtaggtggac ttaatccgga taacggtgat ttagatgcaa
      121 aaaatttgaa aattaagctg gttctattag gggactctgg tgttggaaaa agttgcattg
      181 ttcttcggtt tgttcgtggt cagtttgatc caacatccaa ggtcactgtt ggagcttcat
      241 tcttgtcaca gactatagct ctgcaggact caaccacagt taaatttgag atttgggata
      301 ctgctggcca ggaaagatat gcagcactag ccccacttta ttaccgaggt gctgcagttg
      361 gagtaattgt ttatgatata actaatcccg actcatttca taaagctcaa tattgggtga
      421 aggaactaca aaagcacggg agccctgata ttgtgttggc tttagttggc aacaaggctg
      481 atcttcaaga gaaacgggag gtgtccgttc aaggtggaat ggattatgcg gaaaagaatg
      541 gaatgttttt cattgaaact tctgccaaga cggctgacaa cattaatcag ttattcgagg
      601 aaattgcaaa gagattacct cgacccactc cagcatgata gcgtatgttg gaaacatcaa
      661 agggaacctg gtaatcgctg cttgcggtgt aatcagggaa atttatgtat attcgcgaga
      721 caatgtttga ttttccatac gtaattattg atttcgtgtt gtatctgcct gaccagatct
      781 gttactaacg caagaagcta aactttgttt actgtacaat gtca
//
LOCUS       XM_071829804            2525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides stromal 70 kDa heat
            shock-related protein, chloroplastic-like (LOC139839675), mRNA.
ACCESSION   XM_071829804
VERSION     XM_071829804.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2525
                     /gene="LOC139839675"
                     /note="stromal 70 kDa heat shock-related protein,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 15 Proteins"
                     /db_xref="GeneID:139839675"
     CDS             106..2211
                     /gene="LOC139839675"
                     /codon_start=1
                     /product="stromal 70 kDa heat shock-related protein,
                     chloroplastic-like"
                     /protein_id="XP_071685905.1"
                     /db_xref="GeneID:139839675"
                     /translation="MASSSTAHIPLGATAFTSSTKSSNTVLFSHGLRTSVSFSQQISS
                     LKLKTTTKSRRNGALRVFAEKVVGIDLGTTNSAVGAMEGGKPVIVTNAEGQRTTPSVV
                     AYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYTVVRDENGN
                     VKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKD
                     AGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVL
                     STSGDTHLGGDDFDKRIVDWLAASFKKDEGIELLKDKQALQRLTETAEKAKMELSTLT
                     QANISLPFITATNDGPKHIDTTLTRAKFEELCSDLLDRLKKPVENSLRDAKLSFKDLD
                     EVILVGGSTRIPAVQEVVKGLTGKEPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLD
                     VTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDN
                     KSLGSFRLDGIPPAPRGVPQVEVKFDIDANGILSVTALDKGTGKKQDITITGASTLPN
                     DEVQRMVNEAEKFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAPVKEKVEE
                     KLGSLKEAISGGSTQTIKDAMAALNQEVMQLGQSLYNQPGASGAGPSPGEGSGSESSE
                     PSSKGPEGDVIDADFTDSK"
     misc_feature    202..2202
                     /gene="LOC139839675"
                     /note="chloroplast Hsp70; Provisional; Region: PLN03184"
                     /db_xref="CDD:215618"
     polyA_site      2525
                     /gene="LOC139839675"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctactttatc atcttctttc ttcacagctt ctccccaatt tctccgtcgt ctcttatccc
       61 aaatctctag ggttttagcg cggctgagaa attaaaccac caaaaatggc atcatcatca
      121 actgctcata tccctctcgg agccaccgct ttcacttcat caaccaaatc ttcaaacacc
      181 gtcttattca gccacggatt aagaacctcc gtttcatttt cacaacaaat atcatctctt
      241 aaactcaaaa ccaccacaaa atctcgtaga aatggagctc tcagagtctt cgccgaaaaa
      301 gtcgtcggaa ttgatctcgg aaccaccaat tccgccgtcg gtgctatgga aggtggtaag
      361 ccggtgattg tgaccaacgc tgagggacag agaacgacgc cgtctgttgt tgcttacacg
      421 aagaacggtg ataggttagt tggacaaatt gctaaacggc aggcggttgt taaccctgag
      481 aatacgtttt tctcggttaa acggtttatt ggaaggaaga tgtctgaggt tgatgatgaa
      541 tcgaagcagg tttcctacac cgtcgttcgt gatgagaacg gtaacgtaaa gcttgattgt
      601 cctgccattg gcaaacaatt tgcagctgaa gaaatttcag ctcaggtatt gagaaagctt
      661 gtagatgatg catcaaagtt tttgaatgat aaggttacaa aagctgttgt aacagttcct
      721 gcttatttta acgattcgca aagaacggct acaaaggatg ctggtcgtat tgccggactt
      781 gaggttcttc gtattattaa tgaacctaca gctgcttcac tagcttatgg cttcgaaagg
      841 aagaataatg agacaatatt agtgtttgat cttggtggtg gtacttttga cgtttcagta
      901 cttgaggttg gtgatggagt atttgaagtg ctttctactt ctggagatac acatctaggt
      961 ggtgatgatt ttgataagag aatagttgat tggcttgctg ctagctttaa aaaagatgag
     1021 ggtatagagt tattaaagga caagcaggct ctacagcgtt tgactgagac tgctgaaaag
     1081 gctaagatgg aactttcaac tttgacacaa gcaaatataa gcttgccttt catcacagcc
     1141 acaaatgatg gtcccaaaca cattgacacc acccttacaa gggcaaagtt tgaagaactc
     1201 tgctcagatc tacttgatag gcttaaaaaa ccagttgaaa attccctgag agatgccaag
     1261 ttatctttta aggatctaga tgaagtgata cttgttggcg gttcaacacg tataccagct
     1321 gttcaggaag tcgttaaggg cttgactgga aaggaaccaa atgtcaccgt caatcctgat
     1381 gaagttgttg ctttgggtgc tgcagttcag gctggtgttt tagctggaga tgttagtgat
     1441 attgttctac ttgatgttac accgttatcc attgggctgg aaacccttgg tggtgtgatg
     1501 acaaagatta tacctagaaa cacgacccta cccacttcaa aatcagaggt tttttcaaca
     1561 gctgctgatg ggcagacgag tgtcgagatc aacgttcttc aaggtgaaag agaatttgtg
     1621 agagacaaca agtctcttgg cagcttccgt cttgatggaa tcccgcctgc tccacgtggc
     1681 gttccacaag ttgaggtcaa attcgacatt gatgcaaatg gtattttgtc tgtcaccgcc
     1741 cttgacaaag gcacaggaaa gaaacaagat atcactatca ctggtgctag cacactgcct
     1801 aatgatgagg tacaaaggat ggttaatgaa gccgagaagt ttgcaaagga agacaaggaa
     1861 aaacgtgatg ccattgacac aaagaaccaa gcagattcag tagtttacca gacagaaaaa
     1921 cagctaaaag aattgggtga caaggttccc gcccctgtta aagagaaggt cgaggagaaa
     1981 ctcggatcac ttaaggaggc catatctggt ggctcaacac agaccataaa agatgctatg
     2041 gctgccctta accaagaagt tatgcagctt ggtcagtccc tgtacaacca gcctggtgca
     2101 tcaggagctg gaccctcacc tggtgaaggc tccggttctg agtcatctga accatcaagt
     2161 aagggacctg aaggcgacgt cattgatgct gattttaccg acagcaagtg aaactaaaag
     2221 ggatttaata ttataattga agtaatatca agattttttg tctggtaatt ttcaatgaag
     2281 ttgtgtataa gggttctcat tgttttttct tgaactggtt cgtcctttac ttttcagttc
     2341 cttgccgtgc tttagatttg aaatgaaact ttatagttaa gtgataggaa agaattatag
     2401 gtagaacctt gagtcatggc acactgatgt tgttttaatg ccgtggaact ttgtctattt
     2461 ggtatggttc ttgtgcagat taaacttttt caataaaata tcagtaccat cttttatacg
     2521 gagta
//
LOCUS       XM_071829805            2525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides amine oxidase
            [copper-containing] gamma 2-like (LOC139839676), mRNA.
ACCESSION   XM_071829805
VERSION     XM_071829805.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2525
                     /gene="LOC139839676"
                     /note="amine oxidase [copper-containing] gamma 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 16 Proteins"
                     /db_xref="GeneID:139839676"
     CDS             121..2304
                     /gene="LOC139839676"
                     /codon_start=1
                     /product="amine oxidase [copper-containing] gamma 2-like"
                     /protein_id="XP_071685906.1"
                     /db_xref="GeneID:139839676"
                     /translation="MEVSSHIQLFIIVIISTSIFILFSCTKYPPQNLDCTTNTPPRCT
                     TNTHRKTTLKYNSIYNTDVHNSNHHLMATPLHPLDPLTVSEINKIRSILLAYEPFRSS
                     ISISTLSLDEPEKDQVLAWKPGDPLPPRRAFITSFLHGQTHLLTVDVGLGRVIGHNVS
                     VGSGYPMLTINDFETALQVVYSDLEFNKSILARGVHFNDLTCVPPSSGWFGLDEEGKR
                     IIKVQCFSSQDTPNFYMRPIEGLVVTVDVDKKKIIKITDNGRGIPIPKAINTDYRYTT
                     NSPFPDMTAQVNPNPMSLEQPKGPSFTVENGHIVKWANWVFHIKHDIRAGMIISQAMI
                     RAENGEYRSVMYKGFASELFVPYMDPDESWYFKSYMDAGEFGLGATAMSLLKLNDCPR
                     YAHYMDGVFAGVDGKPFILPNMICIFERYAGDIGWRHSEIPILGFDIKESRPKVTLVA
                     RMAASVGNYDYIFDWEFQTDGLIRVKVGLSGMLMVKGTPYENIHDISNTGDMTGTLVS
                     ENVIGVVHDHFISFHLDMDIDGANNSFAEVNLVKEETLGQSPRKSFLKAKRKVAKTED
                     DARIKLKLYDPSEFHVFNPSRRSRLGNPTGYKIVPSGTAASLLDHDDPPQIRAAFTNN
                     QIWVTPQNKSEVWAGGLLVSQSKGVDTLGVWSSRNRDIENKDIVLWYTLGFHHIPCQE
                     DFPVMPTVSSSFELKPVNFFDRNPILGAKPTFRKDLPICSAASSY"
     misc_feature    328..2247
                     /gene="LOC139839676"
                     /note="amine oxidase (copper-containing); Region:
                     PLN02566"
                     /db_xref="CDD:215306"
ORIGIN      
        1 aaggttcagt taaagaccag agtttttgtc acaactacaa agcaaacaaa tgtggatcat
       61 gtctcatgtg aaccacatat atatcattaa aaaacaagtc tgcagacaga gatactgaag
      121 atggaagtat catctcatat ccaattattc atcatcgtca tcatctctac atcaattttc
      181 atattatttt catgtacaaa atacccaccc caaaacctcg attgcaccac caatacgcca
      241 ccaaggtgca ccaccaatac tcaccggaaa acaaccctca aatacaactc aatttacaac
      301 accgacgtcc ataactccaa ccatcattta atggctactc cacttcatcc acttgacccg
      361 ttgaccgtat ccgaaatcaa taaaattcga tccattcttc tagcatacga accctttagg
      421 tcgtctatat ccatcagcac tctctcttta gatgaacccg aaaaagatca agtacttgct
      481 tggaaaccgg gtgacccgct tccacctaga agggcattta tcacatcgtt tttacatgga
      541 caaactcatc ttctcacggt tgatgtgggc ttgggccgtg tgatcggtca taacgttagt
      601 gtcgggtcgg gttacccgat gttaaccatt aatgacttcg aaacggcttt acaagtcgtg
      661 tattcagatt tggagtttaa taaatccata ttggctcgag gggtgcactt taacgatttg
      721 acttgtgtac caccctcatc gggctggttt gggctcgatg aggaaggaaa aagaatcatt
      781 aaagtccaat gtttttcgag ccaagatact cctaattttt acatgagacc aattgaaggg
      841 ctagtagtca ctgtcgatgt agacaagaaa aaaataataa aaattacgga taacggtaga
      901 ggaattccta taccaaaagc gattaacacg gactatcggt acacaaccaa tagcccgttt
      961 ccggatatga ccgcccaagt gaacccgaac ccaatgtccc tggaacaacc caaaggacct
     1021 agttttacgg ttgagaacgg gcatatagtg aaatgggcca attgggtatt tcacataaaa
     1081 cacgatataa gggctgggat gattatatcc caggccatga ttcgggctga aaatggggag
     1141 tacaggagtg tgatgtacaa gggatttgcg tcagagctat ttgtaccgta tatggacccg
     1201 gatgagtcgt ggtactttaa gtcgtatatg gatgcgggtg agtttgggct tggtgcaacc
     1261 gcaatgtcac ttttgaaatt aaatgattgc ccaaggtacg ctcattatat ggatggggtg
     1321 tttgcagggg ttgatggtaa accgtttatt ctgcccaata tgatatgcat attcgaacgt
     1381 tatgcaggag atattggttg gagacattct gaaatcccga tcttgggttt cgatattaaa
     1441 gaatcaaggc caaaggtgac actagtagct cgaatggcag catccgttgg aaactatgat
     1501 tatatttttg attgggaatt tcaaaccgac ggtttgatcc gtgtaaaggt gggactgtcc
     1561 ggaatgctaa tggtgaaagg gactccctac gaaaacatac acgatatctc caacaccggc
     1621 gatatgaccg ggacactagt atcagagaac gtgatcggtg tagttcacga ccattttatc
     1681 tcttttcacc tcgatatgga catcgatggt gcaaacaatt cgtttgcaga ggtcaatttg
     1741 gtaaaagaag agactttggg acaatctccg cgcaaaagct ttttaaaagc taaaaggaaa
     1801 gtggcaaaga ccgaagacga cgcaagaatc aaactgaaat tgtatgatcc atcagaattt
     1861 cacgttttta atccttctcg aaggtcaaga cttggtaatc caacagggta taaaatcgtg
     1921 cccagtggga ccgcggctag ccttcttgat catgatgatc ctccgcaaat tcgagctgct
     1981 ttcaccaata atcagatttg ggtgactcca caaaataaaa gtgaagtatg ggctggtggt
     2041 cttttggtat ctcaaagcaa aggagtagat acactcggtg tatggtcttc aaggaaccgt
     2101 gatattgaga acaaggacat tgtgttatgg tacacattgg ggtttcatca cataccatgc
     2161 caagaggatt ttccggttat gccaacagtt tcgtcgagtt ttgagctgaa accggtcaat
     2221 ttctttgatc gaaatcccat cctaggagcc aaacctacgt ttagaaagga tctaccaatc
     2281 tgttctgctg ctagctctta ttgacccgct ttatcaaatg cactgccata acttaacaaa
     2341 aagaaggtta taccaaaaag agagagtgat gaaacttttt cttaattttt gtttagtgat
     2401 attcatatat gtagaagaac ttatctttat tcttattaat cgtaactaat tcataaaatt
     2461 aattagttaa atgtaaaata acataaaact tagatgaaat aacgacaagg agatgataac
     2521 cattt
//
LOCUS       XM_071829806            2936 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium channel
            AKT2/3-like (LOC139839677), transcript variant X1, mRNA.
ACCESSION   XM_071829806
VERSION     XM_071829806.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2936
                     /gene="LOC139839677"
                     /note="potassium channel AKT2/3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139839677"
     CDS             199..2739
                     /gene="LOC139839677"
                     /codon_start=1
                     /product="potassium channel AKT2/3-like"
                     /protein_id="XP_071685907.1"
                     /db_xref="GeneID:139839677"
                     /translation="MNSKMDVKQAMFPMPFYGSASSDDNMKERHKDWRKGKHEKGEYE
                     DEPFNLRSLSKVIIPPLGASSNDTQNNVHSRSIIIISPMDSKYRCWQTLMVIMVAYSA
                     WTYPFEVAFLKSSPQSHKHLYIADSIVDLFFAFDIILTFFVAYSDPITHLLVRDPKRI
                     AARYLSTWFVMDVASTVPFELIFYALTGKHHMALPSTILGLLRFWRLRRVKQFFTRLE
                     KDIRFNYFWVRCARLLSVTLFLVHCAGCIYYLLAVLYPREGRTWIGSMNPNFREADLY
                     ILYISAIYWSITTMTTVGYGDLHANNAAEMVFIIFYMLFNLGLTAYIIGNMTNLVVEG
                     TRRTMEFRNSIEAASSFVGRNRLPKRLKDQILAYMCLRFKAESLNQQQLIEQLPKTIC
                     KSIRQHLFLPTVEKVYLFNGVSREILLLLVADMKAEFIPPREDVIIQNEAPDDVYIIV
                     SGEVEILECDPMEKEHVQGALHSGDMFGEVGALCCRPQSYTYRTKTLSQLLRFRTTAL
                     IEAMQTKQPDNVSILKNFLQHHKKLKDLNLGDLLLDTGEEGIDGDPNMSMNLLTVADT
                     GNAAFLDELLKARLDPDISDSKGRTPLHIAASKGHEECVLVLLKHACNIHLRDTDGNT
                     ALWDAIASNHHSIFRILFHWASISDPFTAGELLCTATKRNDLTVMKALLKHGLLVDSK
                     DHHGSTAFQIAVSENNIEMVKLLVMNGANVNEHTLKNKTMKDLVAKAEVGHQIIMPDH
                     ELVVEKLDQCGPREDVDKGIFGNSQGKLVGRVSIYKGLPFVRKKICCTEAGKLIKLPS
                     SLMEIKIIAGEKFGFDTTNAVVTNEDGAEIDSIEVIRDNDKLFIGDIP"
     misc_feature    301..2724
                     /gene="LOC139839677"
                     /note="Voltage-dependent potassium channel; Provisional;
                     Region: PLN03192"
                     /db_xref="CDD:215625"
     misc_feature    1876..1956
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1963..2055
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    order(1966..1968,1978..1983,1990..1998,2002..2007,
                     2017..2019,2026..2028,2053..2055,2059..2061,2065..2067,
                     2125..2130,2137..2139,2185..2190,2194..2199,2209..2211,
                     2218..2220,2245..2247,2251..2253,2257..2259,2269..2274,
                     2281..2289,2293..2298,2308..2310,2317..2319)
                     /gene="LOC139839677"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    2059..2247
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    2251..2337
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 ttgctccact tctttcactt ggaataactc ttaggaccac caccaccatt gtcatcacca
       61 ccatcatcac cattcaccat ctttgatcat ttcaaagagg cgagatgatg agatccgaat
      121 caccttatcg catctagaga tcgactttct acgtaaaacg taagaaaaga cggaactcaa
      181 gttcataaca ttactctcat gaattcgaag atggatgtaa aacaagcgat gtttccgatg
      241 ccattttatg gaagtgcatc aagtgatgat aatatgaaag agaggcataa agattggagg
      301 aaaggtaaac atgaaaaggg agaatatgaa gatgaacctt ttaatttaag gagtttgtca
      361 aaggttataa ttcctccatt gggtgcttca tcaaacgata cacaaaacaa tgttcactca
      421 agatccatca tcatcatctc tcctatggac tccaaatata ggtgctggca gacattaatg
      481 gttataatgg tagcatattc agcatggaca tatccatttg aagttgcatt tcttaaatcc
      541 tctccacaat cccacaaaca tctttacatt gctgactcca ttgttgatct cttctttgcc
      601 tttgacatta tcttgacctt ttttgttgct tactctgacc ccatcactca tcttcttgtt
      661 cgtgatccca aacgtattgc tgccaggtac ttatcgacat ggtttgttat ggatgtggcg
      721 tcaacagtgc catttgaact aattttctac gcgctcactg ggaaacatca tatggcttta
      781 ccgtctacca tcttgggctt gcttagattt tggcgtcttc ggcgtgtcaa acagtttttc
      841 accagacttg aaaaagacat aagattcaac tacttctggg tcagatgtgc aaggcttctt
      901 agtgtgactt tgtttttggt acattgtgct ggttgcatct actacttgtt agcggtgttg
      961 tatccccgtg aaggaaggac ttggattggg tcaatgaatc cgaattttcg agaagcagat
     1021 ctttacattc tgtacatatc cgccatatat tggtctataa ccactatgac caccgttggc
     1081 tatggtgatc ttcatgctaa taatgcagca gagatggttt ttattatctt ctatatgctc
     1141 ttcaatcttg gccttactgc ctacattatc ggaaacatga ccaatttagt agtcgaaggc
     1201 acccgccgaa ccatggaatt cagaaatagc attgaagcgg catcaagctt tgtcggccga
     1261 aatagactgc caaagaggct taaagatcaa attttggcat acatgtgttt aagattcaaa
     1321 gcagagagct tgaatcaaca acaactaatt gagcagttgc caaaaacaat atgcaagagc
     1381 attagacaac atctgttttt gccgacagtt gaaaaagtct atctgtttaa tggtgtctca
     1441 agagaaattc tattacttct ggttgctgat atgaaggctg aattcatacc accaagagaa
     1501 gatgttatta ttcaaaatga ggcacctgat gacgtgtaca taatcgtatc aggtgaagta
     1561 gaaatattag aatgtgatcc aatggagaaa gaacatgtgc agggtgctct gcattcgggc
     1621 gacatgtttg gagaagttgg tgcactttgt tgtagaccac aatcttacac ctaccgaacc
     1681 aaaaccttga gtcaactctt gcggttcaga accaccgctc tcattgaagc aatgcagacc
     1741 aaacaacccg acaatgtttc catccttaag aactttcttc agcatcacaa gaagcttaaa
     1801 gatctgaact taggtgactt attgttggat actggagaag agggtataga tggcgatcca
     1861 aatatgtcga tgaacttgct tacggttgct gataccggca atgctgcttt tcttgatgaa
     1921 ctacttaaag cgaggcttga tcccgatata agtgactcaa aagggcgaac ccctttgcac
     1981 atagcagcat caaaggggca tgaagaatgt gttttggttc ttctaaaaca tgcatgcaac
     2041 atacacctta gagatacgga tggtaatact gcattatggg atgccatagc atcaaaccat
     2101 cattcgatat ttcgaatttt attccattgg gcgtccatat ctgacccgtt tacagctggt
     2161 gagctcttat gcacagcaac taaaagaaac gatctaacgg tgatgaaagc cctcttgaaa
     2221 cacggtctgc ttgtggactc aaaggaccac catggatcaa ctgcatttca aatagcggtt
     2281 tctgaaaaca atatagaaat ggtaaagctg cttgtgatga acggtgcaaa tgtaaatgag
     2341 cacacgctca agaacaagac tatgaaggat ttagtggcaa aggcggaagt tggtcaccag
     2401 atcattatgc ccgatcatga gctagtagtg gagaaacttg atcaatgtgg tccgagagag
     2461 gacgtggata agggtatttt tggtaattct caaggaaaac ttgttggtag ggttagtatt
     2521 tataaagggc ttccttttgt aagaaagaag atttgttgta cagaggctgg gaaacttatt
     2581 aagttaccaa gttcactaat ggagatcaag attattgcag gtgagaagtt tggatttgat
     2641 actacaaatg cagtagttac aaatgaagat ggagcagaga ttgactctat tgaagtgatt
     2701 agagataatg ataagctttt tataggagat attccttgat tatatgacca ataataaaac
     2761 atataaaaaa ggatcttggt tgtcgagaat ttcatattat tatatcatta aagtagttaa
     2821 agttacatac agatgaacaa atgtctactc tctagatgtt tgcaggcaac atattacaac
     2881 tgtgtttgga tgtataatga taactgtatt gagacattgt tgtgctaata ctttgt
//
LOCUS       XM_071829807            2921 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium channel
            AKT2/3-like (LOC139839677), transcript variant X2, mRNA.
ACCESSION   XM_071829807
VERSION     XM_071829807.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2921
                     /gene="LOC139839677"
                     /note="potassium channel AKT2/3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139839677"
     CDS             184..2724
                     /gene="LOC139839677"
                     /codon_start=1
                     /product="potassium channel AKT2/3-like"
                     /protein_id="XP_071685908.1"
                     /db_xref="GeneID:139839677"
                     /translation="MNSKMDVKQAMFPMPFYGSASSDDNMKERHKDWRKGKHEKGEYE
                     DEPFNLRSLSKVIIPPLGASSNDTQNNVHSRSIIIISPMDSKYRCWQTLMVIMVAYSA
                     WTYPFEVAFLKSSPQSHKHLYIADSIVDLFFAFDIILTFFVAYSDPITHLLVRDPKRI
                     AARYLSTWFVMDVASTVPFELIFYALTGKHHMALPSTILGLLRFWRLRRVKQFFTRLE
                     KDIRFNYFWVRCARLLSVTLFLVHCAGCIYYLLAVLYPREGRTWIGSMNPNFREADLY
                     ILYISAIYWSITTMTTVGYGDLHANNAAEMVFIIFYMLFNLGLTAYIIGNMTNLVVEG
                     TRRTMEFRNSIEAASSFVGRNRLPKRLKDQILAYMCLRFKAESLNQQQLIEQLPKTIC
                     KSIRQHLFLPTVEKVYLFNGVSREILLLLVADMKAEFIPPREDVIIQNEAPDDVYIIV
                     SGEVEILECDPMEKEHVQGALHSGDMFGEVGALCCRPQSYTYRTKTLSQLLRFRTTAL
                     IEAMQTKQPDNVSILKNFLQHHKKLKDLNLGDLLLDTGEEGIDGDPNMSMNLLTVADT
                     GNAAFLDELLKARLDPDISDSKGRTPLHIAASKGHEECVLVLLKHACNIHLRDTDGNT
                     ALWDAIASNHHSIFRILFHWASISDPFTAGELLCTATKRNDLTVMKALLKHGLLVDSK
                     DHHGSTAFQIAVSENNIEMVKLLVMNGANVNEHTLKNKTMKDLVAKAEVGHQIIMPDH
                     ELVVEKLDQCGPREDVDKGIFGNSQGKLVGRVSIYKGLPFVRKKICCTEAGKLIKLPS
                     SLMEIKIIAGEKFGFDTTNAVVTNEDGAEIDSIEVIRDNDKLFIGDIP"
     misc_feature    286..2709
                     /gene="LOC139839677"
                     /note="Voltage-dependent potassium channel; Provisional;
                     Region: PLN03192"
                     /db_xref="CDD:215625"
     misc_feature    1861..1941
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1948..2040
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    order(1951..1953,1963..1968,1975..1983,1987..1992,
                     2002..2004,2011..2013,2038..2040,2044..2046,2050..2052,
                     2110..2115,2122..2124,2170..2175,2179..2184,2194..2196,
                     2203..2205,2230..2232,2236..2238,2242..2244,2254..2259,
                     2266..2274,2278..2283,2293..2295,2302..2304)
                     /gene="LOC139839677"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    2044..2232
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    2236..2322
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 gctccacttc tttcacttgg aataactctt aggaccacca ccaccattgt catcaccacc
       61 atcatcacca ttcaccatct ttgatcattt caaagaggcg agatgatgag atccgaatca
      121 ccttatcgca tctagagatc gactttctac gtaaaacgaa ctcaagttca taacattact
      181 ctcatgaatt cgaagatgga tgtaaaacaa gcgatgtttc cgatgccatt ttatggaagt
      241 gcatcaagtg atgataatat gaaagagagg cataaagatt ggaggaaagg taaacatgaa
      301 aagggagaat atgaagatga accttttaat ttaaggagtt tgtcaaaggt tataattcct
      361 ccattgggtg cttcatcaaa cgatacacaa aacaatgttc actcaagatc catcatcatc
      421 atctctccta tggactccaa atataggtgc tggcagacat taatggttat aatggtagca
      481 tattcagcat ggacatatcc atttgaagtt gcatttctta aatcctctcc acaatcccac
      541 aaacatcttt acattgctga ctccattgtt gatctcttct ttgcctttga cattatcttg
      601 accttttttg ttgcttactc tgaccccatc actcatcttc ttgttcgtga tcccaaacgt
      661 attgctgcca ggtacttatc gacatggttt gttatggatg tggcgtcaac agtgccattt
      721 gaactaattt tctacgcgct cactgggaaa catcatatgg ctttaccgtc taccatcttg
      781 ggcttgctta gattttggcg tcttcggcgt gtcaaacagt ttttcaccag acttgaaaaa
      841 gacataagat tcaactactt ctgggtcaga tgtgcaaggc ttcttagtgt gactttgttt
      901 ttggtacatt gtgctggttg catctactac ttgttagcgg tgttgtatcc ccgtgaagga
      961 aggacttgga ttgggtcaat gaatccgaat tttcgagaag cagatcttta cattctgtac
     1021 atatccgcca tatattggtc tataaccact atgaccaccg ttggctatgg tgatcttcat
     1081 gctaataatg cagcagagat ggtttttatt atcttctata tgctcttcaa tcttggcctt
     1141 actgcctaca ttatcggaaa catgaccaat ttagtagtcg aaggcacccg ccgaaccatg
     1201 gaattcagaa atagcattga agcggcatca agctttgtcg gccgaaatag actgccaaag
     1261 aggcttaaag atcaaatttt ggcatacatg tgtttaagat tcaaagcaga gagcttgaat
     1321 caacaacaac taattgagca gttgccaaaa acaatatgca agagcattag acaacatctg
     1381 tttttgccga cagttgaaaa agtctatctg tttaatggtg tctcaagaga aattctatta
     1441 cttctggttg ctgatatgaa ggctgaattc ataccaccaa gagaagatgt tattattcaa
     1501 aatgaggcac ctgatgacgt gtacataatc gtatcaggtg aagtagaaat attagaatgt
     1561 gatccaatgg agaaagaaca tgtgcagggt gctctgcatt cgggcgacat gtttggagaa
     1621 gttggtgcac tttgttgtag accacaatct tacacctacc gaaccaaaac cttgagtcaa
     1681 ctcttgcggt tcagaaccac cgctctcatt gaagcaatgc agaccaaaca acccgacaat
     1741 gtttccatcc ttaagaactt tcttcagcat cacaagaagc ttaaagatct gaacttaggt
     1801 gacttattgt tggatactgg agaagagggt atagatggcg atccaaatat gtcgatgaac
     1861 ttgcttacgg ttgctgatac cggcaatgct gcttttcttg atgaactact taaagcgagg
     1921 cttgatcccg atataagtga ctcaaaaggg cgaacccctt tgcacatagc agcatcaaag
     1981 gggcatgaag aatgtgtttt ggttcttcta aaacatgcat gcaacataca ccttagagat
     2041 acggatggta atactgcatt atgggatgcc atagcatcaa accatcattc gatatttcga
     2101 attttattcc attgggcgtc catatctgac ccgtttacag ctggtgagct cttatgcaca
     2161 gcaactaaaa gaaacgatct aacggtgatg aaagccctct tgaaacacgg tctgcttgtg
     2221 gactcaaagg accaccatgg atcaactgca tttcaaatag cggtttctga aaacaatata
     2281 gaaatggtaa agctgcttgt gatgaacggt gcaaatgtaa atgagcacac gctcaagaac
     2341 aagactatga aggatttagt ggcaaaggcg gaagttggtc accagatcat tatgcccgat
     2401 catgagctag tagtggagaa acttgatcaa tgtggtccga gagaggacgt ggataagggt
     2461 atttttggta attctcaagg aaaacttgtt ggtagggtta gtatttataa agggcttcct
     2521 tttgtaagaa agaagatttg ttgtacagag gctgggaaac ttattaagtt accaagttca
     2581 ctaatggaga tcaagattat tgcaggtgag aagtttggat ttgatactac aaatgcagta
     2641 gttacaaatg aagatggagc agagattgac tctattgaag tgattagaga taatgataag
     2701 ctttttatag gagatattcc ttgattatat gaccaataat aaaacatata aaaaaggatc
     2761 ttggttgtcg agaatttcat attattatat cattaaagta gttaaagtta catacagatg
     2821 aacaaatgtc tactctctag atgtttgcag gcaacatatt acaactgtgt ttggatgtat
     2881 aatgataact gtattgagac attgttgtgc taatactttg t
//
LOCUS       XM_071829808            2919 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium channel
            AKT2/3-like (LOC139839677), transcript variant X3, mRNA.
ACCESSION   XM_071829808
VERSION     XM_071829808.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2919
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2919
                     /gene="LOC139839677"
                     /note="potassium channel AKT2/3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139839677"
     CDS             182..2722
                     /gene="LOC139839677"
                     /codon_start=1
                     /product="potassium channel AKT2/3-like"
                     /protein_id="XP_071685909.1"
                     /db_xref="GeneID:139839677"
                     /translation="MNSKMDVKQAMFPMPFYGSASSDDNMKERHKDWRKGKHEKGEYE
                     DEPFNLRSLSKVIIPPLGASSNDTQNNVHSRSIIIISPMDSKYRCWQTLMVIMVAYSA
                     WTYPFEVAFLKSSPQSHKHLYIADSIVDLFFAFDIILTFFVAYSDPITHLLVRDPKRI
                     AARYLSTWFVMDVASTVPFELIFYALTGKHHMALPSTILGLLRFWRLRRVKQFFTRLE
                     KDIRFNYFWVRCARLLSVTLFLVHCAGCIYYLLAVLYPREGRTWIGSMNPNFREADLY
                     ILYISAIYWSITTMTTVGYGDLHANNAAEMVFIIFYMLFNLGLTAYIIGNMTNLVVEG
                     TRRTMEFRNSIEAASSFVGRNRLPKRLKDQILAYMCLRFKAESLNQQQLIEQLPKTIC
                     KSIRQHLFLPTVEKVYLFNGVSREILLLLVADMKAEFIPPREDVIIQNEAPDDVYIIV
                     SGEVEILECDPMEKEHVQGALHSGDMFGEVGALCCRPQSYTYRTKTLSQLLRFRTTAL
                     IEAMQTKQPDNVSILKNFLQHHKKLKDLNLGDLLLDTGEEGIDGDPNMSMNLLTVADT
                     GNAAFLDELLKARLDPDISDSKGRTPLHIAASKGHEECVLVLLKHACNIHLRDTDGNT
                     ALWDAIASNHHSIFRILFHWASISDPFTAGELLCTATKRNDLTVMKALLKHGLLVDSK
                     DHHGSTAFQIAVSENNIEMVKLLVMNGANVNEHTLKNKTMKDLVAKAEVGHQIIMPDH
                     ELVVEKLDQCGPREDVDKGIFGNSQGKLVGRVSIYKGLPFVRKKICCTEAGKLIKLPS
                     SLMEIKIIAGEKFGFDTTNAVVTNEDGAEIDSIEVIRDNDKLFIGDIP"
     misc_feature    284..2707
                     /gene="LOC139839677"
                     /note="Voltage-dependent potassium channel; Provisional;
                     Region: PLN03192"
                     /db_xref="CDD:215625"
     misc_feature    1859..1939
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1946..2038
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    order(1949..1951,1961..1966,1973..1981,1985..1990,
                     2000..2002,2009..2011,2036..2038,2042..2044,2048..2050,
                     2108..2113,2120..2122,2168..2173,2177..2182,2192..2194,
                     2201..2203,2228..2230,2234..2236,2240..2242,2252..2257,
                     2264..2272,2276..2281,2291..2293,2300..2302)
                     /gene="LOC139839677"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    2042..2230
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    2234..2320
                     /gene="LOC139839677"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 ctccacttct tcacttggaa taactcttag gaccaccacc accattgtca tcaccaccat
       61 catcaccatt caccatcttt gatcatttca aagaggcgag atggtgagat ccgaatcacg
      121 ttatcgcatc tagagatcga ctttctacgt aaaacgaact caagttcata acattactct
      181 catgaattcg aagatggatg taaaacaagc gatgtttccg atgccatttt atggaagtgc
      241 atcaagtgat gataatatga aagagaggca taaagattgg aggaaaggta aacatgaaaa
      301 gggagaatat gaagatgaac cttttaattt aaggagtttg tcaaaggtta taattcctcc
      361 attgggtgct tcatcaaacg atacacaaaa caatgttcac tcaagatcca tcatcatcat
      421 ctctcctatg gactccaaat ataggtgctg gcagacatta atggttataa tggtagcata
      481 ttcagcatgg acatatccat ttgaagttgc atttcttaaa tcctctccac aatcccacaa
      541 acatctttac attgctgact ccattgttga tctcttcttt gcctttgaca ttatcttgac
      601 cttttttgtt gcttactctg accccatcac tcatcttctt gttcgtgatc ccaaacgtat
      661 tgctgccagg tacttatcga catggtttgt tatggatgtg gcgtcaacag tgccatttga
      721 actaattttc tacgcgctca ctgggaaaca tcatatggct ttaccgtcta ccatcttggg
      781 cttgcttaga ttttggcgtc ttcggcgtgt caaacagttt ttcaccagac ttgaaaaaga
      841 cataagattc aactacttct gggtcagatg tgcaaggctt cttagtgtga ctttgttttt
      901 ggtacattgt gctggttgca tctactactt gttagcggtg ttgtatcccc gtgaaggaag
      961 gacttggatt gggtcaatga atccgaattt tcgagaagca gatctttaca ttctgtacat
     1021 atccgccata tattggtcta taaccactat gaccaccgtt ggctatggtg atcttcatgc
     1081 taataatgca gcagagatgg tttttattat cttctatatg ctcttcaatc ttggccttac
     1141 tgcctacatt atcggaaaca tgaccaattt agtagtcgaa ggcacccgcc gaaccatgga
     1201 attcagaaat agcattgaag cggcatcaag ctttgtcggc cgaaatagac tgccaaagag
     1261 gcttaaagat caaattttgg catacatgtg tttaagattc aaagcagaga gcttgaatca
     1321 acaacaacta attgagcagt tgccaaaaac aatatgcaag agcattagac aacatctgtt
     1381 tttgccgaca gttgaaaaag tctatctgtt taatggtgtc tcaagagaaa ttctattact
     1441 tctggttgct gatatgaagg ctgaattcat accaccaaga gaagatgtta ttattcaaaa
     1501 tgaggcacct gatgacgtgt acataatcgt atcaggtgaa gtagaaatat tagaatgtga
     1561 tccaatggag aaagaacatg tgcagggtgc tctgcattcg ggcgacatgt ttggagaagt
     1621 tggtgcactt tgttgtagac cacaatctta cacctaccga accaaaacct tgagtcaact
     1681 cttgcggttc agaaccaccg ctctcattga agcaatgcag accaaacaac ccgacaatgt
     1741 ttccatcctt aagaactttc ttcagcatca caagaagctt aaagatctga acttaggtga
     1801 cttattgttg gatactggag aagagggtat agatggcgat ccaaatatgt cgatgaactt
     1861 gcttacggtt gctgataccg gcaatgctgc ttttcttgat gaactactta aagcgaggct
     1921 tgatcccgat ataagtgact caaaagggcg aacccctttg cacatagcag catcaaaggg
     1981 gcatgaagaa tgtgttttgg ttcttctaaa acatgcatgc aacatacacc ttagagatac
     2041 ggatggtaat actgcattat gggatgccat agcatcaaac catcattcga tatttcgaat
     2101 tttattccat tgggcgtcca tatctgaccc gtttacagct ggtgagctct tatgcacagc
     2161 aactaaaaga aacgatctaa cggtgatgaa agccctcttg aaacacggtc tgcttgtgga
     2221 ctcaaaggac caccatggat caactgcatt tcaaatagcg gtttctgaaa acaatataga
     2281 aatggtaaag ctgcttgtga tgaacggtgc aaatgtaaat gagcacacgc tcaagaacaa
     2341 gactatgaag gatttagtgg caaaggcgga agttggtcac cagatcatta tgcccgatca
     2401 tgagctagta gtggagaaac ttgatcaatg tggtccgaga gaggacgtgg ataagggtat
     2461 ttttggtaat tctcaaggaa aacttgttgg tagggttagt atttataaag ggcttccttt
     2521 tgtaagaaag aagatttgtt gtacagaggc tgggaaactt attaagttac caagttcact
     2581 aatggagatc aagattattg caggtgagaa gtttggattt gatactacaa atgcagtagt
     2641 tacaaatgaa gatggagcag agattgactc tattgaagtg attagagata atgataagct
     2701 ttttatagga gatattcctt gattatatga ccaataataa aacatataaa aaaggatctt
     2761 ggttgtcgag aatttcatat tattatatca ttaaagtagt taaagttaca tacagatgaa
     2821 caaatgtcta ctctctagat gtttgcaggc aacatattac aactgtgttt ggatgtataa
     2881 tgataactgt attgagacat tgttgtgcta atactttgt
//
LOCUS       XM_071829809            1416 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RHOMBOID-like protein 10,
            chloroplastic (LOC139839678), transcript variant X1, mRNA.
ACCESSION   XM_071829809
VERSION     XM_071829809.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1416
                     /gene="LOC139839678"
                     /note="RHOMBOID-like protein 10, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839678"
     CDS             206..1225
                     /gene="LOC139839678"
                     /codon_start=1
                     /product="RHOMBOID-like protein 10, chloroplastic isoform
                     X1"
                     /protein_id="XP_071685910.1"
                     /db_xref="GeneID:139839678"
                     /translation="MVGSIASPQPTPEFSISGKTLKPFHLITNAAALRLGHFLRHRFI
                     THRHHFTSILHSSIKVPHLGHVLPSHGVTYGGLDQFKWLDFCQWSHDAWATTFSSCMS
                     FFGGQGNNINYGDQEKVYLRTPMGRPVNKRKLTDMLLVINVLVYVAQVASKGQLIMWG
                     AKINSLIDKGELWRLVTSAFLHANVGHLMINCYSLNSIGPTMEHLSGPKRYLAIYMTS
                     AIASTTMSYWLSKAPAVGASGAIFGLVGSFAIFVIRHNDMVKGGVGDLKHVARVIAVN
                     MAIGLLSQGIDNWGHLGGLIGGIATSWLIGPAWKFEPESHLGRRVLVDKAPIFSLPGA
                     KRPSK"
     misc_feature    617..1072
                     /gene="LOC139839678"
                     /note="Membrane-associated serine protease, rhomboid
                     family [Posttranslational modification, protein turnover,
                     chaperones]; Region: GlpG; COG0705"
                     /db_xref="CDD:440469"
     polyA_site      1416
                     /gene="LOC139839678"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agggagatct ttccaagtct atgtgatttt gattgtgagc tttcgaaaac tttgatggag
       61 taaatttgat ttcgtgggaa gaaattcaac gaaagcttca aattcagaag aggattaaag
      121 gaagttgagt acagaccata tatttcatat attatcaaca cttttagcaa taaataaata
      181 aataaatatt catagcaaat tatcaatggt tggttcaatc gcatctcctc agccaacacc
      241 ggaattttca atttccggta aaactttaaa acctttccat ctcatcacca acgccgccgc
      301 cctccgcctc ggtcacttcc ttcgccaccg tttcatcacc catcgccacc actttacctc
      361 tattcttcac tcatctataa aggttccaca tttgggtcat gttctcccgt cacacggagt
      421 tacgtatgga gggttagacc aatttaaatg gttagatttt tgtcaatggt ctcatgatgc
      481 ttgggcgacc acgttctcta gctgcatgtc attttttggt ggacaaggaa acaatatcaa
      541 ttatggagac caagaaaagg tgtacttaag gactccgatg ggacgtcctg ttaataaaag
      601 gaaattgaca gatatgttac tcgtgattaa tgtattggta tatgttgcac aagtagcatc
      661 aaagggacag ttaataatgt ggggagcaaa gattaatagt ctcattgaca aaggagagct
      721 ttggaggcta gttacatctg cgtttcttca tgcaaatgtc ggacacctta tgatcaattg
      781 ttattcactg aattccattg gtcctaccat ggagcatctg agtggcccca aaagatacct
      841 cgcgatttat atgacatctg caattgcaag tacaacaatg agctattggc tcagtaaagc
      901 gccagcagtt ggtgcatctg gagcaatttt tggattagtt ggatcttttg ccatttttgt
      961 aattagacac aacgacatgg ttaaaggtgg ggtaggagac ttgaaacatg ttgcacgtgt
     1021 gattgctgta aatatggcta ttgggctgct gtcacaaggt atcgacaatt ggggacatct
     1081 tggagggtta ataggtggaa ttgctacgtc atggcttatt ggtcctgcat ggaagtttga
     1141 gcccgaatct catttaggca gaagagtact tgtcgataaa gcacctatat tctctctgcc
     1201 aggcgcaaaa cgaccatcta aataactcgt ttcatcaact gttctcattt taaatagcac
     1261 attatttgca ggtgattatg acaatattct atttgtgtat atgatttcta cactcaaaca
     1321 atgataaggt ttgtctactg aggtttgaca ctgaccatta gactatcttg ggatggtttt
     1381 aatattttaa tgatatcttt ttgtgattgg ttgtaa
//
LOCUS       XM_071829810            1406 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RHOMBOID-like protein 10,
            chloroplastic (LOC139839678), transcript variant X2, mRNA.
ACCESSION   XM_071829810
VERSION     XM_071829810.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1406
                     /gene="LOC139839678"
                     /note="RHOMBOID-like protein 10, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839678"
     CDS             259..1215
                     /gene="LOC139839678"
                     /codon_start=1
                     /product="RHOMBOID-like protein 10, chloroplastic isoform
                     X2"
                     /protein_id="XP_071685911.1"
                     /db_xref="GeneID:139839678"
                     /translation="MGSTDHKQWVPLGPKFVGTSSIYWGGEKKQKRSFRLDCVPHLGH
                     VLPSHGVTYGGLDQFKWLDFCQWSHDAWATTFSSCMSFFGGQGNNINYGDQEKVYLRT
                     PMGRPVNKRKLTDMLLVINVLVYVAQVASKGQLIMWGAKINSLIDKGELWRLVTSAFL
                     HANVGHLMINCYSLNSIGPTMEHLSGPKRYLAIYMTSAIASTTMSYWLSKAPAVGASG
                     AIFGLVGSFAIFVIRHNDMVKGGVGDLKHVARVIAVNMAIGLLSQGIDNWGHLGGLIG
                     GIATSWLIGPAWKFEPESHLGRRVLVDKAPIFSLPGAKRPSK"
     misc_feature    607..1062
                     /gene="LOC139839678"
                     /note="Membrane-associated serine protease, rhomboid
                     family [Posttranslational modification, protein turnover,
                     chaperones]; Region: GlpG; COG0705"
                     /db_xref="CDD:440469"
     polyA_site      1406
                     /gene="LOC139839678"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttgcgctag tcgggttttg gttgtagttt gtgtactcta tgaatcatac atatctgttt
       61 ttctaggcaa gtatcacaat tcttagttcc tagtttgacc ttgtttcaaa ataatttaaa
      121 ggtgaaaaag catagttgtt aacttttagt ataatatata gttttatatg gtttaggaaa
      181 ttgaacaata tctagtcctt gggggtcttg gttcaattct cactagtagc atatatttca
      241 tgttcaagca ccgcacacat ggggtccacg gatcataagc aatgggtacc acttggacca
      301 aagttcgttg gtactagtag catatactgg ggtggcgaga aaaagcagaa acggtcattt
      361 cggttggact gcgttccaca tttgggtcat gttctcccgt cacacggagt tacgtatgga
      421 gggttagacc aatttaaatg gttagatttt tgtcaatggt ctcatgatgc ttgggcgacc
      481 acgttctcta gctgcatgtc attttttggt ggacaaggaa acaatatcaa ttatggagac
      541 caagaaaagg tgtacttaag gactccgatg ggacgtcctg ttaataaaag gaaattgaca
      601 gatatgttac tcgtgattaa tgtattggta tatgttgcac aagtagcatc aaagggacag
      661 ttaataatgt ggggagcaaa gattaatagt ctcattgaca aaggagagct ttggaggcta
      721 gttacatctg cgtttcttca tgcaaatgtc ggacacctta tgatcaattg ttattcactg
      781 aattccattg gtcctaccat ggagcatctg agtggcccca aaagatacct cgcgatttat
      841 atgacatctg caattgcaag tacaacaatg agctattggc tcagtaaagc gccagcagtt
      901 ggtgcatctg gagcaatttt tggattagtt ggatcttttg ccatttttgt aattagacac
      961 aacgacatgg ttaaaggtgg ggtaggagac ttgaaacatg ttgcacgtgt gattgctgta
     1021 aatatggcta ttgggctgct gtcacaaggt atcgacaatt ggggacatct tggagggtta
     1081 ataggtggaa ttgctacgtc atggcttatt ggtcctgcat ggaagtttga gcccgaatct
     1141 catttaggca gaagagtact tgtcgataaa gcacctatat tctctctgcc aggcgcaaaa
     1201 cgaccatcta aataactcgt ttcatcaact gttctcattt taaatagcac attatttgca
     1261 ggtgattatg acaatattct atttgtgtat atgatttcta cactcaaaca atgataaggt
     1321 ttgtctactg aggtttgaca ctgaccatta gactatcttg ggatggtttt aatattttaa
     1381 tgatatcttt ttgtgattgg ttgtaa
//
LOCUS       XM_071829811            1367 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RHOMBOID-like protein 10,
            chloroplastic (LOC139839678), transcript variant X3, mRNA.
ACCESSION   XM_071829811
VERSION     XM_071829811.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1367
                     /gene="LOC139839678"
                     /note="RHOMBOID-like protein 10, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139839678"
     CDS             220..1176
                     /gene="LOC139839678"
                     /codon_start=1
                     /product="RHOMBOID-like protein 10, chloroplastic isoform
                     X2"
                     /protein_id="XP_071685912.1"
                     /db_xref="GeneID:139839678"
                     /translation="MGSTDHKQWVPLGPKFVGTSSIYWGGEKKQKRSFRLDCVPHLGH
                     VLPSHGVTYGGLDQFKWLDFCQWSHDAWATTFSSCMSFFGGQGNNINYGDQEKVYLRT
                     PMGRPVNKRKLTDMLLVINVLVYVAQVASKGQLIMWGAKINSLIDKGELWRLVTSAFL
                     HANVGHLMINCYSLNSIGPTMEHLSGPKRYLAIYMTSAIASTTMSYWLSKAPAVGASG
                     AIFGLVGSFAIFVIRHNDMVKGGVGDLKHVARVIAVNMAIGLLSQGIDNWGHLGGLIG
                     GIATSWLIGPAWKFEPESHLGRRVLVDKAPIFSLPGAKRPSK"
     misc_feature    568..1023
                     /gene="LOC139839678"
                     /note="Membrane-associated serine protease, rhomboid
                     family [Posttranslational modification, protein turnover,
                     chaperones]; Region: GlpG; COG0705"
                     /db_xref="CDD:440469"
     polyA_site      1367
                     /gene="LOC139839678"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttcaatttc cggtaaaact ttaaaacctt tccatctcat caccaacgcc gccgccctcc
       61 gcctcggtca cttccttcgc caccgtttca tcacccatcg ccaccacttt acctctattc
      121 ttcactcatc tataaaggaa attgaacaat atctagtcct tgggggtctt ggttcaattc
      181 tcactagtag catatatttc atgttcaagc accgcacaca tggggtccac ggatcataag
      241 caatgggtac cacttggacc aaagttcgtt ggtactagta gcatatactg gggtggcgag
      301 aaaaagcaga aacggtcatt tcggttggac tgcgttccac atttgggtca tgttctcccg
      361 tcacacggag ttacgtatgg agggttagac caatttaaat ggttagattt ttgtcaatgg
      421 tctcatgatg cttgggcgac cacgttctct agctgcatgt cattttttgg tggacaagga
      481 aacaatatca attatggaga ccaagaaaag gtgtacttaa ggactccgat gggacgtcct
      541 gttaataaaa ggaaattgac agatatgtta ctcgtgatta atgtattggt atatgttgca
      601 caagtagcat caaagggaca gttaataatg tggggagcaa agattaatag tctcattgac
      661 aaaggagagc tttggaggct agttacatct gcgtttcttc atgcaaatgt cggacacctt
      721 atgatcaatt gttattcact gaattccatt ggtcctacca tggagcatct gagtggcccc
      781 aaaagatacc tcgcgattta tatgacatct gcaattgcaa gtacaacaat gagctattgg
      841 ctcagtaaag cgccagcagt tggtgcatct ggagcaattt ttggattagt tggatctttt
      901 gccatttttg taattagaca caacgacatg gttaaaggtg gggtaggaga cttgaaacat
      961 gttgcacgtg tgattgctgt aaatatggct attgggctgc tgtcacaagg tatcgacaat
     1021 tggggacatc ttggagggtt aataggtgga attgctacgt catggcttat tggtcctgca
     1081 tggaagtttg agcccgaatc tcatttaggc agaagagtac ttgtcgataa agcacctata
     1141 ttctctctgc caggcgcaaa acgaccatct aaataactcg tttcatcaac tgttctcatt
     1201 ttaaatagca cattatttgc aggtgattat gacaatattc tatttgtgta tatgatttct
     1261 acactcaaac aatgataagg tttgtctact gaggtttgac actgaccatt agactatctt
     1321 gggatggttt taatatttta atgatatctt tttgtgattg gttgtaa
//
LOCUS       XM_071829812             800 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RHOMBOID-like protein 10,
            chloroplastic (LOC139839679), mRNA.
ACCESSION   XM_071829812
VERSION     XM_071829812.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..800
                     /gene="LOC139839679"
                     /note="RHOMBOID-like protein 10, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839679"
     CDS             268..588
                     /gene="LOC139839679"
                     /codon_start=1
                     /product="RHOMBOID-like protein 10, chloroplastic"
                     /protein_id="XP_071685913.1"
                     /db_xref="GeneID:139839679"
                     /translation="MLNCCSLDWIGPIMEDLSGPKRYLAIYMTSAVACSTMSYWFCQG
                     SAVGASGAIFGLVGSYAVYLIRHKNMVDNWAEELWDVVSLIAMNLAIGCELRFVDDWG
                     HVSH"
     misc_feature    268..582
                     /gene="LOC139839679"
                     /note="Rhomboid family; Region: Rhomboid; cl21536"
                     /db_xref="CDD:451297"
ORIGIN      
        1 ataatctatg ttttgtttta tacaataact aattctacca ttgcactttt catccaagtc
       61 tttttagttt atatttttga ataacacgtg aatcaaacga acccattgtt catattagta
      121 ttcttttctg tcagggtata tactgcacaa ctaattacag acggagactt actaacgtgg
      181 ggggcaaagg ttaatagtct gattgacaaa ggagagcttt ggaggctagt cacatgtaac
      241 tttcttcatt caaatctcct acaccttatg ctcaactgtt gttcactaga ttggattggt
      301 cctatcatgg aggatctgag tggcccaaaa agatacctcg ctatttatat gacatcagca
      361 gttgcatgtt caacaatgag ttattggttc tgtcaagggt cagcagttgg tgcatctgga
      421 gcaattttcg gattagttgg atcttatgct gtatatctaa ttagacacaa aaatatggta
      481 gacaattggg cagaagagtt gtgggatgtt gtgagtttga tcgctatgaa tctggctatc
      541 ggatgtgagt tacgttttgt cgacgattgg ggacatgtga gtcattgatg ttaaaatatt
      601 aaattggacg gtggatggtt ggtgtatgat tcatgcaaga tagagtcaac actcacatgt
      661 ttattatggt aaaactatta caaatgaggc tttgaaattg tctgcataat ttcacctacc
      721 ctcatttcca gtagtataaa tatgagcctt tagcaagctc atttcattat tccataattc
      781 attctccatt cttgttctaa
//
LOCUS       XM_071829813            1939 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides hsp70-Hsp90 organizing
            protein 3-like (LOC139839680), transcript variant X1, mRNA.
ACCESSION   XM_071829813
VERSION     XM_071829813.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1939
                     /gene="LOC139839680"
                     /note="hsp70-Hsp90 organizing protein 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139839680"
     CDS             100..1863
                     /gene="LOC139839680"
                     /codon_start=1
                     /product="hsp70-Hsp90 organizing protein 3-like"
                     /protein_id="XP_071685914.1"
                     /db_xref="GeneID:139839680"
                     /translation="MADEAKAKGNAAFSAGDYTDAIRHFTDAINLAPTNHVLYSNRSA
                     AYASLNQFSEALTDAKKTVDLKPDWSKGYSRLGAAHHGLRQYDDAVSAYKKGLEVDPN
                     NETLKSGLTDAQSAAAASRSRDSARGGPANNLFGDAFGPDMLAKLTADPSTRMFMQQP
                     DFVNMMMDLQRNPSNLNLYLKDQRVMQALSVLLNVKMQSPSGSGFGDDVEMPDSPPKE
                     RKRPAYEAEPVKEKKREPEPEPEPELMDDEEREVKERKAQAQKEKEAGNAAYKKKDFD
                     TAIEHYTKAIELDDCDISFLTNRAAVYLEMAKYDECIKDCEKAVERGRELRSDYKMVA
                     RALTRKGTALVKMAKTSKDYEPAIETFQKALTEHRNPDTLKKLNDAERAKKELEQQEY
                     YDPELAEKEREKGNEYFKEQKYPDAIRHYTEALRRNPKDPKAYSNRAACYTKLGAMPE
                     GLKDAEKCIEIDPKFSKGYTRKGAIQFFMKEFDKALETYQEGLKHDPQNPELLEGVRS
                     CVQQINRASRGDLTPDELKERQAKAMQDPEIQNILTDPVMAQVLKDLQENPKAAQDHM
                     KNPSVMNKIQKLISAGIVQMR"
     misc_feature    103..189
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(106..108,115..120,127..132,136..138,208..210,
                     217..222,229..234,238..243,310..312,319..324,331..336,
                     343..345)
                     /gene="LOC139839680"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    124..>429
                     /gene="LOC139839680"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; Region: Spy; COG3914"
                     /db_xref="CDD:443119"
     misc_feature    202..294
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    307..393
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    517..681
                     /gene="LOC139839680"
                     /note="STI1 domain; Region: STI1; pfam17830"
                     /db_xref="CDD:436075"
     misc_feature    874..960
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(877..879,886..891,898..903,907..909,979..981,
                     988..993,1000..1005,1009..1014,1102..1104,1111..1116,
                     1123..1128,1135..1137)
                     /gene="LOC139839680"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    889..1608
                     /gene="LOC139839680"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; Region: LapB; COG2956"
                     /db_xref="CDD:442196"
     misc_feature    973..1065
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1099..1194
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1291..1377
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(1294..1296,1303..1308,1315..1320,1324..1326,
                     1396..1398,1405..1410,1417..1422,1426..1431,1498..1500,
                     1507..1512,1519..1524,1531..1533)
                     /gene="LOC139839680"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1390..1482
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1495..1581
                     /gene="LOC139839680"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1681..1839
                     /gene="LOC139839680"
                     /note="STI1 domain; Region: STI1; pfam17830"
                     /db_xref="CDD:436075"
ORIGIN      
        1 ttcttattat atctccaatc gcccaaatcg acttctatct catcgactat acaaaattac
       61 aacaaattta cagtcatcaa ctgccggcaa cattatccga tggccgacga agcgaaagca
      121 aaaggtaacg cagcgttctc cgccggtgat tacaccgacg ccatccgtca cttcactgac
      181 gcaatcaatc tcgcaccaac aaaccatgtt ttatactcca atagatcagc tgcgtacgct
      241 tcgttaaatc aattttctga agcattaact gacgccaaaa aaaccgtcga tctgaaacct
      301 gattggtcaa aaggctactc tcggctcggc gcggctcatc acggcttacg tcaatacgac
      361 gacgccgttt cagcttataa aaaaggtcta gaagttgatc ctaacaatga aacattgaaa
      421 tctggattaa ctgatgctca atcagcagct gctgcatcta ggtcacgtga ttcggcacgt
      481 ggtggaccgg ctaataatct atttggtgat gcgtttggac cggatatgtt ggctaagttg
      541 actgctgacc cgtctacacg gatgtttatg caacaaccgg attttgtaaa catgatgatg
      601 gatttacaac gaaaccctag caatttgaat ttgtatttga aggatcagag agtgatgcaa
      661 gcgttgagtg tgctgttgaa tgtgaagatg caaagtccta gtggtagtgg ttttggagat
      721 gatgtggaga tgccggattc gcctccgaaa gagcggaaac ggccggcata tgaagctgag
      781 ccggtgaagg agaagaagcg ggagcctgaa ccggagcctg aaccggagct gatggatgat
      841 gaggagaggg aggttaagga gaggaaagcg caggcgcaaa aggagaaaga ggccggtaat
      901 gctgcttata agaagaagga ttttgatact gctattgaac actatactaa agctattgaa
      961 ttggatgatt gtgatatttc gtttcttacg aatagggctg ctgtatactt ggagatggct
     1021 aagtatgatg aatgcataaa agattgtgaa aaagctgtgg agaggggaag ggagcttcgg
     1081 tcagactata agatggttgc cagggctctg actagaaaag gaactgcttt ggttaagatg
     1141 gctaaaacat ccaaagacta cgaacctgca attgagacct tccaaaaagc ccttacggag
     1201 catcgcaacc cagatacctt gaagaagcta aatgatgcag aaagagcaaa gaaggaactg
     1261 gagcaacaag agtactatga ccctgaactt gccgaaaaag agcgtgagaa aggaaatgaa
     1321 tacttcaaag agcagaaata cccagatgct attaggcact acaccgaagc tttgagaaga
     1381 aatcccaaag acccaaaggc atacagtaat agagctgctt gctacacaaa actcggtgca
     1441 atgccagaag gtctaaaaga tgccgaaaag tgcatagaaa ttgatccaaa attctcgaag
     1501 gggtacacca gaaaaggtgc catccagttt ttcatgaaag agtttgacaa agccttggag
     1561 acgtatcaag agggattgaa acacgatcct caaaacccag agttgctaga gggtgtcagg
     1621 agctgtgtgc aacaaattaa ccgagccagc cgtggagatt tgacacctga cgagttgaag
     1681 gagagacagg cgaaggctat gcaggatcca gaaattcaga atattcttac agatcctgtt
     1741 atggctcagg ttttgaagga tcttcaagag aaccccaagg ctgcgcagga tcacatgaag
     1801 aatccatctg tgatgaacaa gattcagaag ctgatcagtg caggaattgt gcagatgcga
     1861 taatctgttt tacttgtaac attttttttg cttggatatg tttggtaaag aacacgttaa
     1921 ttggctgtgg ttttggtga
//
LOCUS       XR_011757025            1955 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides hsp70-Hsp90 organizing
            protein 3-like (LOC139839680), transcript variant X2, misc_RNA.
ACCESSION   XR_011757025
VERSION     XR_011757025.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1955
                     /gene="LOC139839680"
                     /note="hsp70-Hsp90 organizing protein 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139839680"
     misc_RNA        1..1955
                     /gene="LOC139839680"
                     /product="hsp70-Hsp90 organizing protein 3-like,
                     transcript variant X2"
                     /db_xref="GeneID:139839680"
ORIGIN      
        1 tttcttatta tatctccaat cgcccaaatc gacttctatc tcatcgacta tacaaaatta
       61 caacaaattt acagtcatca actgccggca acattatccg atggccgacg aagcgaaagc
      121 aaaaggtaac gcagcgttct ccgccggtga ttacaccgac gccatccgtc acttcactga
      181 cgcaatcaat ctcgcaccaa caaaccatgt tttatactcc aatagatcag ctgcgtacgc
      241 ttcgttaaat caattttctg aagcattaac tgacgccaaa aaaaccgtcg atctgaaacc
      301 tgattggtca aaaggctact ctcggctcgg cgcggctcat cacggcttac gtcaatacga
      361 cgacgccgtt tcagcttata aaaaaggtct agaagttgat cctaacaatg aaacattgaa
      421 atctggatta actgatgctc aatcagcagc tgctgcatct aggtcacgtg attcggcacg
      481 tggtggaccg gctaataatc tatttggtga tgcgtttgga ccggatatgt tggctaagtt
      541 gactgctgac ccgtctacac ggatgtttat gcaacaaccg gattttgtaa acatgatgat
      601 ggatttacaa cgaaacccta gcaatttgaa tttgtatttg aaggatcaga gagtgatgca
      661 agcgttgagt gtgctgttga atgtgaagat gcaaagtcct agtggtagtg gttttggaga
      721 tgatgtggag atgccggatt cgcctccgaa agagcggaaa cggccggcat atgaagctga
      781 gccggtgaag gagaagaagc gggagcctga accggagcct gaaccggagc tgatggatga
      841 tgaggagagg gaggttaagg agaggaaagc gcaggcgcaa aaggagaaag aggccggtaa
      901 tgctgcttat aagaagaagg attttgatac tgctattgaa cactatacta aagctattga
      961 attggatgat tgtgatattt cgtttcttac gaatagggct gctgtatact tggagatggc
     1021 taagtatgat gaatgcataa aagattgtga aaaagctgtg gagaggggaa gggagcttcg
     1081 gtcagactat aagatggttg ccagggctct gactagaaaa ggaactgctt tggttaagat
     1141 ggctaaaaca tccaaagact acgaacctgc aattgagacc ttccaaaaag cccttacgga
     1201 gcatcgcaac ccagatacct tgaagaagct aaatgatgca gaaagagcaa agaaggaact
     1261 ggagcaacaa gagtactatg accctgaact tgccgaaaaa gagcgtgaga aaggaaatga
     1321 atacttcaaa gagcagaaat acccagatgc tattaggcac tacaccgaag ctttgagaag
     1381 aaatcccaaa gacccaaagg catacagtaa tagagctgct tgctacacaa aactcggtgc
     1441 aatgccagaa ggtctaaaag atgccgaaaa gtgcatagaa attgatccaa aattctcgaa
     1501 ggggtacacc agaaaaggtg ccatccagtt tttcatgaaa gagtttgaca aagccttgga
     1561 gacgtatcaa gagggattga aacacgatcc tcaaaaccca gagttgctag agggtgtcag
     1621 gagctgtgtg caacaaatta accgagccag ccgtggagat ttgacacctg acgagttgaa
     1681 ggagagacag gcgaaggcta tgcaggatcc agaaattcag aatattctta cagatcctgt
     1741 tatggctcag gttttgaagg atcttcaaga gaaccccaag gctgcgcagg atcacatgaa
     1801 gaatccatct gtgatgaaca agattcagaa gctgatcagt gcaggaattg tgcagatgcg
     1861 ataatctgtt ttacttgtaa catttttttt gcttggatat gtttggtaaa gaacacgtta
     1921 attggctgtg gttttggtga atcataattg aaact
//
LOCUS       XM_071829814            1404 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-processing enzyme
            beta-isozyme-like (LOC139839681), mRNA.
ACCESSION   XM_071829814
VERSION     XM_071829814.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1404
                     /gene="LOC139839681"
                     /note="vacuolar-processing enzyme beta-isozyme-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 41 Proteins"
                     /db_xref="GeneID:139839681"
     CDS             1..1404
                     /gene="LOC139839681"
                     /codon_start=1
                     /product="vacuolar-processing enzyme beta-isozyme-like"
                     /protein_id="XP_071685915.1"
                     /db_xref="GeneID:139839681"
                     /translation="MAAYHFFVLLLTLLVVQLSEASRSSLFSFTNDQSPSNSTKWAVL
                     VAGSSGYYNYRHQADVCHAYQILKRGGLNDENIIVFMYDDIANNTMNPRPGVIINSPN
                     GSDVYHGVPKDYTGEAVTAANFYAVLLGNASGVTGGSGKVLSSKPQDKIFVYYTDHGG
                     PGILGMPTSAFVYANDFINVLETKHAMGTYDEMVIYVEACESGSIFEGLIPEDLNIYV
                     TTASNANESSWATYCPDMTPPPPPGFDTCLGDLYSVSWLEDSDAEDLNTETLEQQYLK
                     VKTRTLNNNTYEGSHVMQYGTQRISNETVSVYQGSFTWNGTSNPFQSFESMGVVNQRD
                     ADVYSMWHMYKRSTGDSQQKEELLKKIKEITAHRAHLDSSIDIIRGKLLQGEKAVKRT
                     EGMALVDNWDCLKTMVRTFETHCGSLTQYGMKHTQTFADACNNNISKEAMDEAAKASC
                     SSYNMGQWDPAIVGYIA"
     misc_feature    118..933
                     /gene="LOC139839681"
                     /note="Peptidase C13 family; Region: Peptidase_C13;
                     pfam01650"
                     /db_xref="CDD:396290"
     misc_feature    1000..1350
                     /gene="LOC139839681"
                     /note="C-terminal prodomain of legumain; Region:
                     legumain_C; cd21115"
                     /db_xref="CDD:411051"
     misc_feature    order(1003..1008,1012..1020,1024..1029,1036..1038,
                     1183..1185,1201..1206,1210..1215,1222..1224,1234..1236,
                     1252..1254,1267..1272,1276..1281)
                     /gene="LOC139839681"
                     /note="catalytic domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:411051"
ORIGIN      
        1 atggctgctt accacttctt cgtgttacta ctaaccttgc tcgtggtaca actctccgaa
       61 gcttcacgtt ccagtttgtt ttctttcacc aatgatcaat cgccttctaa tagcacgaaa
      121 tgggccgttc ttgtagccgg ttcaagtggc tattacaact atcgtcatca ggctgatgtt
      181 tgtcatgcgt atcaaatact aaaaaggggt ggcttgaatg atgagaacat aatcgtcttc
      241 atgtacgatg acattgctaa taacacaatg aatccaaggc ctggtgtcat tattaacagc
      301 ccgaatggct ccgatgttta ccatggtgta ccaaaggatt acactggaga agctgtgaca
      361 gcagccaatt tctatgctgt gcttcttgga aacgcgtcag gcgtgacagg gggaagcggg
      421 aaagttttat caagcaaacc tcaagataaa atctttgtgt attacaccga tcatggcggc
      481 cctggaatac ttgggatgcc tacctcagct tttgtttatg ctaatgattt cataaatgtt
      541 ttggaaacaa agcatgcaat gggtacctat gatgagatgg ttatatacgt agaagcatgt
      601 gaaagtggaa gtatttttga aggtcttata cccgaagatc tgaacattta tgtaacaact
      661 gcatcgaatg caaacgaaag tagttgggcc acatattgtc cggacatgac ccctccccca
      721 ccacccggtt tcgacacttg cttaggtgac ctgtacagtg tttcttggtt agaagacagt
      781 gatgctgaag atttaaacac tgaaacattg gaacagcaat acttgaaggt gaagacgagg
      841 acattaaata acaacactta cgagggatct catgtgatgc aatatggcac acagcgtatc
      901 agcaacgaga ccgtttcggt gtatcaaggt tcttttactt ggaacgggac ctcgaatccg
      961 ttccaatcat tcgagtcaat gggtgttgtc aaccaaagag atgcagatgt ttattcaatg
     1021 tggcatatgt acaagagatc aaccggagat tcacaacaga aagaagaatt actaaagaaa
     1081 attaaggaaa taacggcgca tagggcacat ttggatagta gtatcgatat aatcaggggc
     1141 aagttattac aaggagaaaa agcagttaag cgtaccgaag gaatggccct tgtggacaat
     1201 tgggactgtc ttaaaaccat ggtgcgaacg tttgagacgc attgtggatc attgactcag
     1261 tatggtatga aacatacaca gacgtttgct gacgcgtgca acaataatat tagcaaggaa
     1321 gctatggatg aagctgcaaa ggcatcatgt agctcgtaca acatgggaca atgggatcct
     1381 gcaattgttg gttatattgc atga
//
LOCUS       XM_071829815            1369 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-processing enzyme
            beta-isozyme-like (LOC139839682), mRNA.
ACCESSION   XM_071829815
VERSION     XM_071829815.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1369
                     /gene="LOC139839682"
                     /note="vacuolar-processing enzyme beta-isozyme-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139839682"
     CDS             1..1158
                     /gene="LOC139839682"
                     /codon_start=1
                     /product="vacuolar-processing enzyme beta-isozyme-like"
                     /protein_id="XP_071685916.1"
                     /db_xref="GeneID:139839682"
                     /translation="MYDDIANNTLNPRPGVIINSPDGDDVYKGVPKDYTGDDVTADNF
                     YAVLLGNASGVTGGGGKVLSSEPQDTIFVYYSDHGGRGVLEMPTRPNVYANDFINALK
                     VKHAMGTYNEMVIYIESCLSGSIFEGLLPEDLNIYVTTASNATERSWATYCPRTDPPS
                     PPGFNTCLGDMYSVSWLEDSDYEDLDEETLEEQYLKTKTRTLNNKDHKGSHVMQYGTQ
                     IISIETVSVYLGSYIWKRNSNPFQSFESMGVVNQRDADVYSMWHQYKSLTENSQEKEE
                     LLKKIKRITSHRAHLDNSIDIIRGKLLQGEIAVRPSGMAIVDDWDCLKTMVRTYETHC
                     GSLTHYGMLHTLFADLCNNNISKEAMDEAAKATCSSYDMGQWDPAIVGYSA"
     misc_feature    1..693
                     /gene="LOC139839682"
                     /note="Peptidase C13 family; Region: Peptidase_C13;
                     pfam01650"
                     /db_xref="CDD:396290"
     misc_feature    760..1104
                     /gene="LOC139839682"
                     /note="C-terminal prodomain of legumain; Region:
                     legumain_C; cd21115"
                     /db_xref="CDD:411051"
     misc_feature    order(763..768,772..780,784..789,796..798,940..942,
                     958..963,967..972,979..981,991..993,1009..1011,1015..1017,
                     1024..1029,1033..1035)
                     /gene="LOC139839682"
                     /note="catalytic domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:411051"
ORIGIN      
        1 atgtacgatg acattgctaa taacacattg aatccaaggc ctggtgtcat tatcaacagt
       61 ccggatgggg acgatgttta caagggtgta ccaaaggatt acactggaga tgatgtgaca
      121 gcagacaatt tctacgctgt gcttcttgga aacgcctcag gggtaacagg tggaggcggg
      181 aaagttttat cgagcgaacc tcaagataca atctttgtgt attacagcga tcatggtggc
      241 cgtggagtcc ttgagatgcc gacccgacct aacgtttatg ctaatgattt catcaatgct
      301 ttgaaggtaa agcatgcaat gggtacttac aatgagatgg ttatatatat agaatcatgt
      361 ctaagtggaa gtatttttga gggtctttta cctgaagatc tcaacattta tgtgacaact
      421 gcatcaaacg caactgagcg tagttgggcc acatattgtc ctcgtacgga ccctccctca
      481 ccccctggtt ttaacacttg cttaggtgac atgtacagtg tttcttggtt agaagacagt
      541 gattacgaag atttagacga agaaacattg gaagagcaat acttgaagac gaagacgagg
      601 acattaaata acaaagatca caagggatct catgtgatgc aatatggcac acaaattatc
      661 agcattgaga ccgtttcggt gtatctaggt tcttatattt ggaaacggaa ctcgaatcca
      721 ttccaatctt ttgagtccat gggtgttgtc aaccaaagag atgcagatgt ttattcaatg
      781 tggcatcagt acaagagttt aaccgaaaat tcacaagaga aagaggaatt actcaagaaa
      841 attaagagaa ttacatcaca tagggcacat ttggataata gtattgatat aatccggggc
      901 aagttattac aaggagaaat agcagttagg cctagtggaa tggccattgt ggacgattgg
      961 gactgtctta aaaccatggt gcgaacttat gagacgcatt gtggatcatt gactcattat
     1021 ggtatgcttc atacactatt tgctgacctg tgcaacaata atattagcaa ggaagctatg
     1081 gatgaagctg caaaggcaac atgtagctcg tacgacatgg gacaatggga tcctgcaatt
     1141 gttggttata gtgcataatc gatctagaat aatggtaata attaaattaa taattaataa
     1201 gcagcatgga gtacgttgtt cttcgatcat gtcccatata tgcatctacc tttgtaattt
     1261 gttcctactt ttgtttaaca cagattaaag atcgaattcg tgtttcgatt gagtttggat
     1321 tgaaatacac aacaatttag ggaaaattac acttgagaga aaaacctag
//
LOCUS       XM_071829816            1919 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides monocopper oxidase-like
            protein SKU5 (LOC139839683), mRNA.
ACCESSION   XM_071829816
VERSION     XM_071829816.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1919
                     /gene="LOC139839683"
                     /note="monocopper oxidase-like protein SKU5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139839683"
     CDS             1..1761
                     /gene="LOC139839683"
                     /codon_start=1
                     /product="monocopper oxidase-like protein SKU5"
                     /protein_id="XP_071685917.1"
                     /db_xref="GeneID:139839683"
                     /translation="MAASFGFLSCLFFILFLRFTFAEDPTVSYHFDISYITASPLGVP
                     QQVIAINGKFPGPTINSTTNNNVVVNVRNKLDENLLLTWAGVQQKRNSWQDGVLGTNC
                     PIPPKWNWTYNFQVKDQIGSYFYFPSLNLQRASGGFGSFIINPRSVIPLPFDTPAGDI
                     TILIGDWYIRNHTALRKALDAGRELGMPDGVLINGKGPYRYNDTLVPDGIDHETINVE
                     PGKTYRIRVSNVGATTSLNFRIQNHNLLLAESEGSYTVQQNYTSLDIHVGQTYSFLIT
                     MDQNASSDYYIVASARFVNESTWQRVTGVGILHYSNSKGKASGPLPDPPQDQYDNTFS
                     MNQARSIRWNISASGARPNPQGSFKYGSINVTDVYILKNKPHVTINGKRRATLSGISY
                     VNPSTPIRLADQFKVKKAYKLDFPNEPLTGPSRMETSVINGTYRGFMEVVLQNNETKM
                     HSYHMDGYSFFVVGMGYGEWTNDSRGQYNKWDGIARATTQVYPGAWTAILISLDNVGV
                     WNLRTENLDSWYLGQETYVRIVNPEINNKTELPIPDNALFCGALSRMQKPQDISSAFT
                     GHGSMVVLGLLMAILSGLLL"
     misc_feature    31..1677
                     /gene="LOC139839683"
                     /note="multi-copper oxidase-related protein; Provisional;
                     Region: PLN00044"
                     /db_xref="CDD:165622"
ORIGIN      
        1 atggctgctt cttttggatt tctctcttgt ctctttttca ttttgtttct aagattcaca
       61 tttgctgaag atccaactgt ttcataccat tttgatattt cttacatcac tgcttcacct
      121 cttggtgtcc cccaacaggt tattgctata aatgggaaat ttccaggccc tactatcaat
      181 tcaaccacta acaacaatgt ggttgtcaat gtgaggaaca aattagatga aaaccttctc
      241 cttacttggg ctggtgtaca acaaaagaga aactcttggc aagatggtgt tcttggtact
      301 aattgcccaa ttcctccaaa gtggaattgg acttacaatt tccaagttaa ggatcaaatc
      361 ggaagctatt tttacttccc atcgctcaat ttacaacgag catcaggtgg ttttggtagt
      421 tttattatta atccgaggtc tgtcattcct ctcccgtttg acacgccagc tggcgatatc
      481 accatcttga ttggtgactg gtacattagg aaccacaccg ctttaagaaa ggcgcttgat
      541 gctggacgtg aacttggaat gcctgacggt gttcttatca atggtaaagg accgtataga
      601 tacaacgata ctcttgttcc tgatggaatc gatcacgaaa ccattaatgt tgaaccaggc
      661 aaaacgtatc gcattcgtgt tagcaatgtc ggagcaacaa ctagtttgaa ctttaggatt
      721 caaaaccata atttgctttt agctgaatcg gagggatcat acacagtgca acaaaactat
      781 actagtttgg atatacatgt tggacaaacg tactcgttct taatcaccat ggatcaaaat
      841 gcaagtagtg attactacat tgttgctagt gctagatttg taaacgaatc gacttggcaa
      901 cgagttactg gtgtcggcat tttgcattac tcgaactcca aagggaaggc atcgggccca
      961 cttcctgatc ctccccaaga tcagtacgat aatacttttt cgatgaacca agcaagatct
     1021 atcaggtgga acatttcggc tagtggggct cgtccaaacc cacaaggttc cttcaaatac
     1081 ggttcgataa atgtgactga tgtgtacata ctgaagaaca aaccacatgt aacaataaat
     1141 ggtaaacgaa gggcgacgct aagtgggatc tcgtatgtga atccgtcaac accaattagg
     1201 cttgccgacc agtttaaagt taagaaagcg tataaacttg attttcctaa cgagccactt
     1261 acgggacctt ctcgtatgga gacgtctgtt atcaatggaa catatcgggg atttatggaa
     1321 gtcgtattac aaaacaatga aaccaagatg cacagttacc atatggatgg atactcattt
     1381 tttgtagtcg gaatgggtta cggtgagtgg actaacgaca gcaggggaca atacaataag
     1441 tgggatggta ttgctcgtgc gacaacacag gtttatcccg gggcatggac tgcaatcttg
     1501 atctctcttg ataatgttgg agtgtggaat ttaagaaccg aaaatcttga ctcgtggtat
     1561 cttggtcaag aaacttatgt taggattgtt aatcctgaga ttaacaacaa aacagagtta
     1621 cccatacccg ataatgccct tttctgtggt gcactcagtc gtatgcaaaa gccgcaagac
     1681 atttcttcag cgtttactgg gcatggatca atggtggtgt tgggtctgtt aatggcaata
     1741 ttgagtggtc tactgctctg attctaaaca ggaacctgct ctaattgact ctgttcatgt
     1801 aatttatgtg ttaaggctta tttaagcttt aattaagttg aggtagtttt ttaaatcttt
     1861 ctctaaattc gtagaaattc atttcttgtt aggggttctg gtaatccatc attctttta
//
LOCUS       XR_011757026             421 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839684), ncRNA.
ACCESSION   XR_011757026
VERSION     XR_011757026.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..421
                     /gene="LOC139839684"
                     /note="uncharacterized LOC139839684; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839684"
     ncRNA           1..421
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839684"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839684"
ORIGIN      
        1 ttaaaggccc tagatcagtt tggttgagcc tcattactcc attcctaacc accaaacttc
       61 atccacttaa atcctagtga gagagtgtga ttcaagtgtg agaaagctca aatcggagaa
      121 gaagaagctt gtttcgggtt ttagctcgag cattaaagtt gttcatctcc tcgttagctt
      181 cgttttgatt gttgtggtac gttacattga cgttgcaagt tcggttatct cacacgaaga
      241 ctttgaggct cgggcgttga caagggtaag agcgttcaat tggattagtg atctcccgct
      301 tgttttgtta ggggatgctt ttgggtgtta gcttttggag ttcgaccgag attgggtagt
      361 ttaaccccaa acaccatgct ctagtgtcgt ttggaactta aacttatatt gggtcgaaac
      421 t
//
LOCUS       XM_071829817            2193 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable NOT transcription
            complex subunit VIP2 (LOC139839685), transcript variant X1, mRNA.
ACCESSION   XM_071829817
VERSION     XM_071829817.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2193
                     /gene="LOC139839685"
                     /note="probable NOT transcription complex subunit VIP2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139839685"
     CDS             224..1963
                     /gene="LOC139839685"
                     /codon_start=1
                     /product="probable NOT transcription complex subunit VIP2
                     isoform X1"
                     /protein_id="XP_071685918.1"
                     /db_xref="GeneID:139839685"
                     /translation="MSGILNSGVNGSTTTFPDATGRAFTAAFSSQLGSSAGEMNHNDA
                     IGLRSINGNFSIPSMPGAYTSRNSGLNGHLNGVQPSPGSISNGRYSVNSLPGTLSQQS
                     AASSLGLSGITNNGGSGIAQGLGNREQLISSMAMGNIINGGSIGRSLSSGGLNMPGVA
                     SRLNLTAPQMASLFGNSYSNAGGPLSQNHYQAGSNHLSSMALLTELNRDHSFDMNDFP
                     QLSGHLSSAGGSQRQLGALARRQNVGFMQQNQEFSIQNEDFPALPGYKGGNEFPVNMH
                     QKEQLRDNAVSVMQSQQHLPVGRSNVFSLGGGGYSSHQQQQQHAPINNGASYLSTNTQ
                     DLHFHGSEARNSGMLATGSRPVNLSNTVPGGSSYDQLLQQYQHFQKQSQIRLASPFRD
                     QEFNSTQASQSVADRFGLLGLLNVIRMNNPDLTPLALGIDLMTLGLNLNSPDNLYKKF
                     SSPWSDESSKGEPHYAIPECFNTKQPSPLNQDSFSRFPPESLFYIFYSMPKDEAQLFA
                     ANELHNRGWFYHRELHLWFSRAPNMELLVKTSSYERGCYYCFDPNTWETVRKDNFVIQ
                     YEMVEDRPVVPRR"
     misc_feature    1562..1927
                     /gene="LOC139839685"
                     /note="NOT2 / NOT3 / NOT5 family; Region: NOT2_3_5;
                     pfam04153"
                     /db_xref="CDD:461199"
ORIGIN      
        1 gacgaatgaa ttagaaacta cagtccgttg caataataaa cccccctaca cgagcttcag
       61 acacactctc ggaacttgaa gaagaagaag atcgccaaca cccgatcacc tgtatacgtc
      121 atcgatcaat cacagtcgag acagtgtgct gccaaagtaa cacctaaatc aacaacaata
      181 gagaggaaat atttgatgcc atttgccttg gacttcatct aggatgtccg gaatacttaa
      241 ttcaggtgta aatgggtcaa cgacaacttt tccagacgct actggaagag cttttactgc
      301 agcattttca tctcagttag gttcctcagc tggtgaaatg aaccacaatg atgcaatagg
      361 gttgcgaagt ataaatggca acttcagcat tcccagcatg cctggggcat acacatcaag
      421 aaattcggga ttaaatggtc atttgaatgg cgtacaacca tccccaggaa gtatatccaa
      481 tgggcggtat tctgtaaata gtcttcccgg tacactttct cagcaatctg ctgccagctc
      541 actcgggctt tcagggatta caaacaatgg agggtcaggt atagctcaag gtttagggaa
      601 cagagaacaa ctgataagct caatggcgat gggaaacatt attaatggtg gaagcattgg
      661 gagaagttta agttctggtg gactgaatat gccaggggtt gctagtcgct taaatctaac
      721 tgcaccccag atggcatctc tttttggaaa ctcttactct aatgctggag ggccactttc
      781 acaaaatcat tatcaagcag ggagtaatca tctaagttca atggctttgt taactgagct
      841 gaatcgtgac cattcgtttg atatgaatga tttcccacag ctaagtgggc atctcagttc
      901 tgctggtggt tctcaaagac aactaggggc tttggcgcgt cggcaaaatg tgggttttat
      961 gcaacaaaac caagaattta gcattcaaaa cgaagatttt cctgctctac ctggatataa
     1021 aggtggtaat gagtttccag ttaatatgca ccaaaaggaa cagctccgtg acaatgcggt
     1081 ttctgttatg caatcccaac aacatttgcc tgtgggaaga tcaaatgtgt tcagcttggg
     1141 aggtggtgga tattcatcac atcagcaaca acaacaacat gctccaatca acaatggtgc
     1201 ctcgtacctc tctacaaaca ctcaagatct tcattttcat ggttctgagg caagaaactc
     1261 ggggatgctt gcaactggat caaggcctgt aaacttgtca aacacagtgc caggtggatc
     1321 atcgtatgat caactcttgc agcagtatca acactttcaa aaacagtcac aaatacgcct
     1381 tgcgagccca tttagggacc aggaatttaa ttccacccaa gcaagtcaat ctgttgcaga
     1441 cagatttgga ttactgggtt tattgaatgt cataaggatg aacaatcctg atttgacccc
     1501 tcttgctctg ggtattgatc tgatgacact gggtctaaac ttgaattcac ctgacaatct
     1561 gtataagaag ttttcatcac catggtctga cgaatcttcg aagggagagc cccattatgc
     1621 cattcctgaa tgttttaata ccaagcaacc atcacccttg aatcaagata gtttctcaag
     1681 atttcctcca gagagtctgt tttatatttt ctatagcatg ccgaaggacg aggctcagtt
     1741 gtttgccgca aatgaactgc acaatagagg atggttttac catcgagagc tgcatctatg
     1801 gttctcaagg gctccaaata tggaactgct agtcaagaca agttcttatg agagaggttg
     1861 ttactactgt ttcgacccta acacctggga aactgttcga aaggacaact ttgttattca
     1921 atatgaaatg gtggaagacc gaccagtggt cccccgtcgt taattatgtg aagtgtctaa
     1981 taatacagac aggtttcgtc gtcttctgaa aagaatttga tgagttaaat cttttggaag
     2041 ttatatacaa gatctaaaat gttaagtaat ccaaatagtt gggtgcataa tgcgaagtgt
     2101 agaaagttat gtttaagatc agatatgata atgtttgttt ttagattcca aacctcttag
     2161 aaatctcaaa aatgctgtac ttcataactg ttt
//
LOCUS       XM_071829818            2173 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable NOT transcription
            complex subunit VIP2 (LOC139839685), transcript variant X2, mRNA.
ACCESSION   XM_071829818
VERSION     XM_071829818.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2173
                     /gene="LOC139839685"
                     /note="probable NOT transcription complex subunit VIP2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139839685"
     CDS             204..1943
                     /gene="LOC139839685"
                     /codon_start=1
                     /product="probable NOT transcription complex subunit VIP2
                     isoform X1"
                     /protein_id="XP_071685919.1"
                     /db_xref="GeneID:139839685"
                     /translation="MSGILNSGVNGSTTTFPDATGRAFTAAFSSQLGSSAGEMNHNDA
                     IGLRSINGNFSIPSMPGAYTSRNSGLNGHLNGVQPSPGSISNGRYSVNSLPGTLSQQS
                     AASSLGLSGITNNGGSGIAQGLGNREQLISSMAMGNIINGGSIGRSLSSGGLNMPGVA
                     SRLNLTAPQMASLFGNSYSNAGGPLSQNHYQAGSNHLSSMALLTELNRDHSFDMNDFP
                     QLSGHLSSAGGSQRQLGALARRQNVGFMQQNQEFSIQNEDFPALPGYKGGNEFPVNMH
                     QKEQLRDNAVSVMQSQQHLPVGRSNVFSLGGGGYSSHQQQQQHAPINNGASYLSTNTQ
                     DLHFHGSEARNSGMLATGSRPVNLSNTVPGGSSYDQLLQQYQHFQKQSQIRLASPFRD
                     QEFNSTQASQSVADRFGLLGLLNVIRMNNPDLTPLALGIDLMTLGLNLNSPDNLYKKF
                     SSPWSDESSKGEPHYAIPECFNTKQPSPLNQDSFSRFPPESLFYIFYSMPKDEAQLFA
                     ANELHNRGWFYHRELHLWFSRAPNMELLVKTSSYERGCYYCFDPNTWETVRKDNFVIQ
                     YEMVEDRPVVPRR"
     misc_feature    1542..1907
                     /gene="LOC139839685"
                     /note="NOT2 / NOT3 / NOT5 family; Region: NOT2_3_5;
                     pfam04153"
                     /db_xref="CDD:461199"
ORIGIN      
        1 caacacccga tcacctgtat acgtcatcga tcaatcacag tcgaacgtgt aatgaatgac
       61 agcccagaga caatctaatg atcttttaat gtttttaaga tgggtattga ttattatgag
      121 acagtgtgct gccaaagtaa cacctaaatc aacaacaata gagaggaaat atttgatgcc
      181 atttgccttg gacttcatct aggatgtccg gaatacttaa ttcaggtgta aatgggtcaa
      241 cgacaacttt tccagacgct actggaagag cttttactgc agcattttca tctcagttag
      301 gttcctcagc tggtgaaatg aaccacaatg atgcaatagg gttgcgaagt ataaatggca
      361 acttcagcat tcccagcatg cctggggcat acacatcaag aaattcggga ttaaatggtc
      421 atttgaatgg cgtacaacca tccccaggaa gtatatccaa tgggcggtat tctgtaaata
      481 gtcttcccgg tacactttct cagcaatctg ctgccagctc actcgggctt tcagggatta
      541 caaacaatgg agggtcaggt atagctcaag gtttagggaa cagagaacaa ctgataagct
      601 caatggcgat gggaaacatt attaatggtg gaagcattgg gagaagttta agttctggtg
      661 gactgaatat gccaggggtt gctagtcgct taaatctaac tgcaccccag atggcatctc
      721 tttttggaaa ctcttactct aatgctggag ggccactttc acaaaatcat tatcaagcag
      781 ggagtaatca tctaagttca atggctttgt taactgagct gaatcgtgac cattcgtttg
      841 atatgaatga tttcccacag ctaagtgggc atctcagttc tgctggtggt tctcaaagac
      901 aactaggggc tttggcgcgt cggcaaaatg tgggttttat gcaacaaaac caagaattta
      961 gcattcaaaa cgaagatttt cctgctctac ctggatataa aggtggtaat gagtttccag
     1021 ttaatatgca ccaaaaggaa cagctccgtg acaatgcggt ttctgttatg caatcccaac
     1081 aacatttgcc tgtgggaaga tcaaatgtgt tcagcttggg aggtggtgga tattcatcac
     1141 atcagcaaca acaacaacat gctccaatca acaatggtgc ctcgtacctc tctacaaaca
     1201 ctcaagatct tcattttcat ggttctgagg caagaaactc ggggatgctt gcaactggat
     1261 caaggcctgt aaacttgtca aacacagtgc caggtggatc atcgtatgat caactcttgc
     1321 agcagtatca acactttcaa aaacagtcac aaatacgcct tgcgagccca tttagggacc
     1381 aggaatttaa ttccacccaa gcaagtcaat ctgttgcaga cagatttgga ttactgggtt
     1441 tattgaatgt cataaggatg aacaatcctg atttgacccc tcttgctctg ggtattgatc
     1501 tgatgacact gggtctaaac ttgaattcac ctgacaatct gtataagaag ttttcatcac
     1561 catggtctga cgaatcttcg aagggagagc cccattatgc cattcctgaa tgttttaata
     1621 ccaagcaacc atcacccttg aatcaagata gtttctcaag atttcctcca gagagtctgt
     1681 tttatatttt ctatagcatg ccgaaggacg aggctcagtt gtttgccgca aatgaactgc
     1741 acaatagagg atggttttac catcgagagc tgcatctatg gttctcaagg gctccaaata
     1801 tggaactgct agtcaagaca agttcttatg agagaggttg ttactactgt ttcgacccta
     1861 acacctggga aactgttcga aaggacaact ttgttattca atatgaaatg gtggaagacc
     1921 gaccagtggt cccccgtcgt taattatgtg aagtgtctaa taatacagac aggtttcgtc
     1981 gtcttctgaa aagaatttga tgagttaaat cttttggaag ttatatacaa gatctaaaat
     2041 gttaagtaat ccaaatagtt gggtgcataa tgcgaagtgt agaaagttat gtttaagatc
     2101 agatatgata atgtttgttt ttagattcca aacctcttag aaatctcaaa aatgctgtac
     2161 ttcataactg ttt
//
LOCUS       XM_071829819            2190 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable NOT transcription
            complex subunit VIP2 (LOC139839685), transcript variant X3, mRNA.
ACCESSION   XM_071829819
VERSION     XM_071829819.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2190
                     /gene="LOC139839685"
                     /note="probable NOT transcription complex subunit VIP2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139839685"
     CDS             224..1960
                     /gene="LOC139839685"
                     /codon_start=1
                     /product="probable NOT transcription complex subunit VIP2
                     isoform X2"
                     /protein_id="XP_071685920.1"
                     /db_xref="GeneID:139839685"
                     /translation="MSGILNSGVNGSTTTFPDATGRAFTAAFSSQLGSSAGEMNHNDA
                     IGLRSINGNFSIPSMPGAYTSRNSGLNGHLNGVQPSPGSISNGRYSVNSLPGTLSQSA
                     ASSLGLSGITNNGGSGIAQGLGNREQLISSMAMGNIINGGSIGRSLSSGGLNMPGVAS
                     RLNLTAPQMASLFGNSYSNAGGPLSQNHYQAGSNHLSSMALLTELNRDHSFDMNDFPQ
                     LSGHLSSAGGSQRQLGALARRQNVGFMQQNQEFSIQNEDFPALPGYKGGNEFPVNMHQ
                     KEQLRDNAVSVMQSQQHLPVGRSNVFSLGGGGYSSHQQQQQHAPINNGASYLSTNTQD
                     LHFHGSEARNSGMLATGSRPVNLSNTVPGGSSYDQLLQQYQHFQKQSQIRLASPFRDQ
                     EFNSTQASQSVADRFGLLGLLNVIRMNNPDLTPLALGIDLMTLGLNLNSPDNLYKKFS
                     SPWSDESSKGEPHYAIPECFNTKQPSPLNQDSFSRFPPESLFYIFYSMPKDEAQLFAA
                     NELHNRGWFYHRELHLWFSRAPNMELLVKTSSYERGCYYCFDPNTWETVRKDNFVIQY
                     EMVEDRPVVPRR"
     misc_feature    1559..1924
                     /gene="LOC139839685"
                     /note="NOT2 / NOT3 / NOT5 family; Region: NOT2_3_5;
                     pfam04153"
                     /db_xref="CDD:461199"
ORIGIN      
        1 gacgaatgaa ttagaaacta cagtccgttg caataataaa cccccctaca cgagcttcag
       61 acacactctc ggaacttgaa gaagaagaag atcgccaaca cccgatcacc tgtatacgtc
      121 atcgatcaat cacagtcgag acagtgtgct gccaaagtaa cacctaaatc aacaacaata
      181 gagaggaaat atttgatgcc atttgccttg gacttcatct aggatgtccg gaatacttaa
      241 ttcaggtgta aatgggtcaa cgacaacttt tccagacgct actggaagag cttttactgc
      301 agcattttca tctcagttag gttcctcagc tggtgaaatg aaccacaatg atgcaatagg
      361 gttgcgaagt ataaatggca acttcagcat tcccagcatg cctggggcat acacatcaag
      421 aaattcggga ttaaatggtc atttgaatgg cgtacaacca tccccaggaa gtatatccaa
      481 tgggcggtat tctgtaaata gtcttcccgg tacactttct cagtctgctg ccagctcact
      541 cgggctttca gggattacaa acaatggagg gtcaggtata gctcaaggtt tagggaacag
      601 agaacaactg ataagctcaa tggcgatggg aaacattatt aatggtggaa gcattgggag
      661 aagtttaagt tctggtggac tgaatatgcc aggggttgct agtcgcttaa atctaactgc
      721 accccagatg gcatctcttt ttggaaactc ttactctaat gctggagggc cactttcaca
      781 aaatcattat caagcaggga gtaatcatct aagttcaatg gctttgttaa ctgagctgaa
      841 tcgtgaccat tcgtttgata tgaatgattt cccacagcta agtgggcatc tcagttctgc
      901 tggtggttct caaagacaac taggggcttt ggcgcgtcgg caaaatgtgg gttttatgca
      961 acaaaaccaa gaatttagca ttcaaaacga agattttcct gctctacctg gatataaagg
     1021 tggtaatgag tttccagtta atatgcacca aaaggaacag ctccgtgaca atgcggtttc
     1081 tgttatgcaa tcccaacaac atttgcctgt gggaagatca aatgtgttca gcttgggagg
     1141 tggtggatat tcatcacatc agcaacaaca acaacatgct ccaatcaaca atggtgcctc
     1201 gtacctctct acaaacactc aagatcttca ttttcatggt tctgaggcaa gaaactcggg
     1261 gatgcttgca actggatcaa ggcctgtaaa cttgtcaaac acagtgccag gtggatcatc
     1321 gtatgatcaa ctcttgcagc agtatcaaca ctttcaaaaa cagtcacaaa tacgccttgc
     1381 gagcccattt agggaccagg aatttaattc cacccaagca agtcaatctg ttgcagacag
     1441 atttggatta ctgggtttat tgaatgtcat aaggatgaac aatcctgatt tgacccctct
     1501 tgctctgggt attgatctga tgacactggg tctaaacttg aattcacctg acaatctgta
     1561 taagaagttt tcatcaccat ggtctgacga atcttcgaag ggagagcccc attatgccat
     1621 tcctgaatgt tttaatacca agcaaccatc acccttgaat caagatagtt tctcaagatt
     1681 tcctccagag agtctgtttt atattttcta tagcatgccg aaggacgagg ctcagttgtt
     1741 tgccgcaaat gaactgcaca atagaggatg gttttaccat cgagagctgc atctatggtt
     1801 ctcaagggct ccaaatatgg aactgctagt caagacaagt tcttatgaga gaggttgtta
     1861 ctactgtttc gaccctaaca cctgggaaac tgttcgaaag gacaactttg ttattcaata
     1921 tgaaatggtg gaagaccgac cagtggtccc ccgtcgttaa ttatgtgaag tgtctaataa
     1981 tacagacagg tttcgtcgtc ttctgaaaag aatttgatga gttaaatctt ttggaagtta
     2041 tatacaagat ctaaaatgtt aagtaatcca aatagttggg tgcataatgc gaagtgtaga
     2101 aagttatgtt taagatcaga tatgataatg tttgttttta gattccaaac ctcttagaaa
     2161 tctcaaaaat gctgtacttc ataactgttt
//
LOCUS       XR_011757027             413 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839686), ncRNA.
ACCESSION   XR_011757027
VERSION     XR_011757027.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..413
                     /gene="LOC139839686"
                     /note="uncharacterized LOC139839686; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839686"
     ncRNA           1..413
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839686"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839686"
ORIGIN      
        1 tttttttttt tttttttaca ggtaatgcat ctaggataat aatgaaatgc atgccaaact
       61 aatgcctgtt ataacatggt ttcatatatg ttatggtcaa tggtttctcc aacaactgat
      121 ggtatcaagt ttaatgaagt ttactgaaaa tggaattata tcgatttagt gttgtattat
      181 cttcatggag ttacatcatt acctactatc ttaaaaaatt aaagttttca atcatggcaa
      241 tatggatcca ctaatggatt taaccatgaa aatgtaatat taaaagttac ttcgcttgcg
      301 cgggattgag tattgttgtt gtagaagtta atacgtacaa attatgtagc attacgtact
      361 agatttgtta taaccacttc cattcttaag atgcttttcc ttttatttgt caa
//
LOCUS       XM_071829820            2538 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable LRR receptor-like
            serine/threonine-protein kinase At1g63430 (LOC139839687), mRNA.
ACCESSION   XM_071829820
VERSION     XM_071829820.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2538
                     /gene="LOC139839687"
                     /note="probable LRR receptor-like serine/threonine-protein
                     kinase At1g63430; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139839687"
     CDS             348..2318
                     /gene="LOC139839687"
                     /codon_start=1
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g63430"
                     /protein_id="XP_071685921.1"
                     /db_xref="GeneID:139839687"
                     /translation="MIQLNPIHVLVITLGIFIATCDAAQPIEVHALSMFKEGIFDDPL
                     LALSNWNALDPDPCNWVGVSCSGDQVTKVNISGSSITGFIARELFQLSSLQELILHGN
                     KLIGPIPKEIGSLKKLRILDLGMNQISGPIPHEIGNMVSIVIINLQSNGLTGQLPSEL
                     ANLKNLRELRLDRNKLRGTVPGANASDFVSNTQDMYASSRLGFCRSASLKVADFSYNF
                     LIGSIPKCLGYLPRTSFQGNCLPYKDIKQRTSEQCGGSPPSKHKSGEVKHHVDSVGHN
                     QQASRSKPAWLLALEIVTGVMVGSLFVVAILTTVHRCKNKSSNIIPWKKSGSDKDHMS
                     YYSDPNLLKDVTRFNRHELEVACEDFSNIIGSSSDSLVYKGNLNGGPEIAVISLCVKE
                     EHWSGYLELYFQKEVADLARLNHENAGKLLGYCIDNTPFTRMLVFEYASNGTLYEHLH
                     YEEGCQLSWTRRMKIVIGIAKGLKYLHTEIEPPFTISELNSSAVYLTDDFSPKLVDFE
                     SWKTILTRSENSSRCISNEGAICVLPSSLQGRHLDIQGNIYTFGVLLLEIISGRPTLC
                     KDKGCLVDWAKDYLEKPEEMASVVDPALKHFREEDLKVICEVVSICIHLRPRDQVSMQ
                     DLCAILESKIDTSVSSELKASSLAWAELALSS"
     misc_feature    429..545
                     /gene="LOC139839687"
                     /note="Leucine rich repeat N-terminal domain; Region:
                     LRRNT_2; pfam08263"
                     /db_xref="CDD:462411"
     misc_feature    558..626
                     /gene="LOC139839687"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    <564..2291
                     /gene="LOC139839687"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    627..698
                     /gene="LOC139839687"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    699..770
                     /gene="LOC139839687"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    771..842
                     /gene="LOC139839687"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    843..971
                     /gene="LOC139839687"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1437..2240
                     /gene="LOC139839687"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1437..1448,1455..1457,1461..1463,1497..1499,
                     1503..1505,1602..1604,1656..1667,1809..1811,1821..1826,
                     1830..1832,1860..1865)
                     /gene="LOC139839687"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 ttctttcatc tttatttttt cctttatatt tctcatttcc tataaaaaag aaaaagacta
       61 caaaatatat aaatataaat atttattaag tgaagcagtg ctgccagtct gccaccaaac
      121 ctgtctttga atccaagttt tcttgaactg gggtttgctt caatctttgt cacttcacct
      181 actgtgattt tccactaatt tgaattctgg gtttgtttaa agattcaatt ttttgtaatc
      241 ccttttgagt ttggttctat tgttcttaaa agattattaa tttaacccat ttatccgata
      301 ttttgatgag ttcttagtgt tctaaagaga ataagtgtag aataaagatg atacagttga
      361 atccaattca tgttttagtt attactttgg gaatctttat agctacttgt gatgctgccc
      421 aaccaattga agttcatgca ctttccatgt tcaaagaagg gatctttgat gacccattat
      481 tggctttatc aaattggaat gctctagatc cagatccttg taactgggtt ggtgtttctt
      541 gttcaggaga tcaagtgaca aaagtgaaca tttctggctc atctataacg ggatttattg
      601 ctcgtgaact ttttcagctg tcttcattac aagaactgat tttacatgga aacaaactca
      661 ttggtccaat accaaaagaa attggatcat taaagaagtt acggatttta gatttgggga
      721 tgaaccagat atctggaccg attcctcatg aaatcgggaa tatggttagc attgttataa
      781 taaacctgca atcaaatggg ttgaccggtc aactgccttc cgagcttgcc aatcttaaga
      841 accttcgaga gcttcggttg gacagaaaca agttgcgcgg aactgttcca ggtgccaatg
      901 cttcagattt tgtttccaac acacaagata tgtacgcgtc ttcgagattg ggattttgtc
      961 gttcggcttc cttaaaagtt gctgatttct cttacaactt tcttatagga agcataccta
     1021 aatgcttagg gtaccttcct aggacaagtt ttcagggtaa ctgcctacca tataaagata
     1081 tcaagcagcg aacttctgaa caatgtggtg gcagcccgcc aagtaagcat aaaagtggag
     1141 aggtgaagca ccatgttgat tcagttgggc acaaccagca ggcttctcgt tcgaaaccag
     1201 catggctttt agctttagaa attgtaacag gagtaatggt tggttcgctc tttgttgttg
     1261 cgattctaac gactgttcac cgatgtaaaa acaaatcttc aaatattatc ccttggaaga
     1321 aatctggtag tgataaagac catatgtcat actattcgga tcctaatttg ttaaaggatg
     1381 tgacgagatt caatcgacat gaacttgaag tagcgtgtga agattttagt aacattattg
     1441 ggtcctcatc agatagttta gtttataagg gaaatctgaa cggtgggccc gaaatagctg
     1501 taatatccct atgtgttaaa gaggaacatt ggagtggcta tcttgaactc tattttcaaa
     1561 aggaggtggc agatttagca cggttaaatc acgagaatgc ggggaaactt ttgggttatt
     1621 gcatagataa tactccattt acgagaatgc tagtcttcga atatgcatca aacggaacgt
     1681 tgtacgagca ccttcattat gaagaagggt gtcaactaag ttggacaaga agaatgaaga
     1741 ttgttatagg cattgcaaaa ggtctaaagt atcttcacac agaaattgaa ccaccgttta
     1801 ctatatccga gttgaattct agtgcggtgt atctcacaga tgatttttcc ccaaagctag
     1861 ttgatttcga aagctggaaa actatactta caagatcaga aaatagctcg cgttgtatca
     1921 gcaacgaggg tgcgatttgc gttctcccaa gttcgttgca aggacgacac ttagatatcc
     1981 agggtaacat ttacactttt ggtgttcttc tcttggagat aatcagcgga cggcccacac
     2041 tctgtaaaga caaaggatgc ctcgtagatt gggctaaaga ttatcttgaa aaaccagaag
     2101 aaatggcttc agttgtcgat ccagcactaa aacattttcg agaggaggat ttgaaggtga
     2161 tatgtgaagt agtttcgatc tgcattcatc taaggcctcg agatcaagtc tcaatgcaag
     2221 atttgtgtgc aattttagaa agcaaaatcg acacttctgt ttcttcagaa ctcaaggcat
     2281 cttcgttagc ttgggccgag cttgcacttt catcttgatc ttgcagaacc tcctaacaaa
     2341 ctgtaaatta tacatatata tttgatgtta ttaataccgg attaaagatt cttttctgat
     2401 tgatcgttca atgagtttat gtaaattttt cgtgtaacct aagagtatag agtgagttcc
     2461 aggctgacaa actcattgtc tttgtatctg ttttccagtt ttagggttct gaattggatg
     2521 aaagatttat gaagcttt
//
LOCUS       XM_071829821            1239 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MANNAN
            SYNTHESIS-RELATED 1-like (LOC139839688), mRNA.
ACCESSION   XM_071829821
VERSION     XM_071829821.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1239
                     /gene="LOC139839688"
                     /note="protein MANNAN SYNTHESIS-RELATED 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839688"
     CDS             1..1239
                     /gene="LOC139839688"
                     /codon_start=1
                     /product="protein MANNAN SYNTHESIS-RELATED 1-like"
                     /protein_id="XP_071685922.1"
                     /db_xref="GeneID:139839688"
                     /translation="MDIRQVMGAVLTFSMFMMLGNMIKRDHFDGDVLLDVPVKSNVEL
                     DAMIMTRHSLYQVNDESKNNGQRLKLCWSNSVMAKVRENTEGFVTFSLTNGPEYHISQ
                     VAKAVQVAKHLGATLVLPEIIGSKGEKRGFEEIYDADKFMTSMKGVIQIERRKNPETF
                     AQKLASVKVPYNANRNYIMTNIEPLFQTTRNIRVITYFPSVSMKQGKVEKDMNPHSCW
                     AVFEALRLKPELQEVVDSVVGRLRSREPNGQFVAIDYKSEMLGTSTCRSNANKGMKNC
                     YNPVEIAQFLQRIGYPRDTLIYVTQSKMDRSLRSFKDLYGNTFTKEDIMQGTEKMKFM
                     SSESADLEREIIDFYICSVSDVFVPAKSGLFYANVVGNRIAASKTEVLVPAQITSSLA
                     QDHVSSYISKRSHPAYTCFC"
     misc_feature    259..1137
                     /gene="LOC139839688"
                     /note="GDP-fucose protein O-fucosyltransferase and related
                     proteins; Region: O-FucT_like; cl16914"
                     /db_xref="CDD:450121"
     misc_feature    order(283..294,760..762,766..768,898..906,1012..1014,
                     1087..1095)
                     /gene="LOC139839688"
                     /note="GDP-Fucose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:211383"
ORIGIN      
        1 atggatatta gacaagttat gggggcagtt ctaacatttt ccatgtttat gatgcttgga
       61 aacatgatca aaagagacca ctttgatggc gatgttttgc ttgatgtccc agtgaaatcc
      121 aacgttgaat tagacgccat gataatgacg aggcatagtc tttatcaagt taatgatgaa
      181 tcgaaaaaca atggccaacg cttaaagctt tgttggagta attctgttat ggcgaaagta
      241 cgagagaata cagaaggttt tgttactttt tcgcttacta atggtcccga atatcacatt
      301 tcacaggttg ctaaagcagt gcaagttgct aaacatcttg gtgcaactct tgtgctgcca
      361 gagatcattg gtagcaaagg tgaaaaaagg ggtttcgaag aaatttatga tgctgataag
      421 ttcatgacga gcatgaaagg cgtaatccaa atagaaaggc gtaaaaatcc cgaaacattt
      481 gcacaaaagc tcgctagcgt aaaagttccc tacaacgcta accggaacta cattatgact
      541 aatatcgaac ctctatttca aacaacacga aacatacgtg ttataactta ttttccatcg
      601 gtatcgatga aacaagggaa ggttgaaaag gatatgaacc cacattcgtg ttgggctgtc
      661 tttgaggctc ttcgtttgaa gcccgaattg caagaagtag ttgactcggt tgtagggcga
      721 ctaagaagtc gtgaaccgaa tgggcaattc gttgcaatcg attataaaag tgagatgctg
      781 ggaacgagca cgtgtcgaag taatgcaaat aaagggatga aaaattgcta caacccggtt
      841 gaaattgcgc agtttcttca aaggatcggg tatccacgag acacgttaat ttacgtgacg
      901 cagtcgaaaa tggatcgtag cttacgttcg tttaaagatt tgtacggcaa cacattcaca
      961 aaggaagaca taatgcaagg aacagagaag atgaagttta tgagttccga gagcgcagat
     1021 ttggaacgag agattatcga tttctatata tgttctgtta gtgatgtttt tgtgcctgca
     1081 aaatcgggtc ttttttatgc gaacgtggtt ggtaacagaa tcgctgcaag caagacagaa
     1141 gttcttgtgc cagctcagat aacgtcgagc ttagcacaag accatgtctc gtcttacata
     1201 tcgaaaagga gtcatccagc gtatacttgc ttctgttaa
//
LOCUS       XR_011757028            1081 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839690), transcript variant X1, ncRNA.
ACCESSION   XR_011757028
VERSION     XR_011757028.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1081
                     /gene="LOC139839690"
                     /note="uncharacterized LOC139839690; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839690"
     ncRNA           1..1081
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839690"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839690"
ORIGIN      
        1 tttaaccctt cttcattctc atccattatt tctatatcta caatcatttt taatgttcta
       61 ctaaaatata tcaatatgat cgagtgttta tagatcgatt agatggagtg acatcgaaat
      121 cggtaatgaa ctaatcaata atataaacga accggcaatg aaattgaatc taattggatc
      181 caatttcttt gcttcaaatc aatatatgca caaaggtacc aaatttcaat ttgtaggtta
      241 aatttaatat tcgattttag tggttaaatc caatcgattg agttcgcttc taatcgttag
      301 gtatttgtaa ttaacttttt ggttttggta gcgatattgt attagattga gttcgtatca
      361 atattctatc gactttggta tccatctgaa aatcaacatc tggtttgtat caatttattc
      421 atttatacac cgttatttaa cctttttttt catgacataa tttggtttaa cccgacaggc
      481 tcatattcac cttcagtacg aatttaaatc tgtagactgt gaaacaagaa gatataacga
      541 atgcctatcg tgggtattgt taaggcacga gaattcaaag gaaagattag cgctaaggtg
      601 acaaaatggg ctaggcggat tggcaatctc aatgttggtc gcagtggaat caggtgactt
      661 cttaaaataa atgggttgaa attgaggatt ggtttgtgga gataatactc cacgtattat
      721 agaattactc ctgacaaggg catatcagct tctattttcc ggcctctgtg gttgttttca
      781 ctggcgacac tctattcagc ttatgtattg gttaacttga aggcagaaat cagtgggttg
      841 caacatcaaa atcagaagca agactcgtgg gtgtggaatt ttatctgcaa cagagatggt
      901 caactcatca cacatcaagt tacacgtctg atcgaggatg ccatttttcc aacaatttac
      961 ttagttgcaa aagctgtgta aatatttcgt tttgaagcca aaattcatac tcatttactt
     1021 tgttcgtcta cttctaatgt ttttgctatt tgtcgattta ttattcacat atattgcact
     1081 a
//
LOCUS       XR_011757029             965 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839690), transcript variant X2, ncRNA.
ACCESSION   XR_011757029
VERSION     XR_011757029.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..965
                     /gene="LOC139839690"
                     /note="uncharacterized LOC139839690; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839690"
     ncRNA           1..965
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839690"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839690"
ORIGIN      
        1 tttaaccctt cttcattctc atccattatt tctatatcta caatcatttt taatgttcta
       61 ctaaaatata tcaatatgat cgagtgttta tagatcgatt agatggagtg acatcgaaat
      121 cggtaatgaa ctaatcaata atataaacga accggcaatg aaattgaatc taattggatc
      181 caatttcttt gcttcaaatc aatatatgca caaagcgata ttgtattaga ttgagttcgt
      241 atcaatattc tatcgacttt ggtatccatc tgaaaatcaa catctggttt gtatcaattt
      301 attcatttat acaccgttat ttaacctttt ttttcatgac ataatttggt ttaacccgac
      361 aggctcatat tcaccttcag tacgaattta aatctgtaga ctgtgaaaca agaagatata
      421 acgaatgcct atcgtgggta ttgttaaggc acgagaattc aaaggaaaga ttagcgctaa
      481 ggtgacaaaa tgggctaggc ggattggcaa tctcaatgtt ggtcgcagtg gaatcaggtg
      541 acttcttaaa ataaatgggt tgaaattgag gattggtttg tggagataat actccacgta
      601 ttatagaatt actcctgaca agggcatatc agcttctatt ttccggcctc tgtggttgtt
      661 ttcactggcg acactctatt cagcttatgt attggttaac ttgaaggcag aaatcagtgg
      721 gttgcaacat caaaatcaga agcaagactc gtgggtgtgg aattttatct gcaacagaga
      781 tggtcaactc atcacacatc aagttacacg tctgatcgag gatgccattt ttccaacaat
      841 ttacttagtt gcaaaagctg tgtaaatatt tcgttttgaa gccaaaattc atactcattt
      901 actttgttcg tctacttcta atgtttttgc tatttgtcga tttattattc acatatattg
      961 cacta
//
LOCUS       XM_071829822            3024 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides methylmalonate-semialdehyde
            dehydrogenase [acylating], mitochondrial-like (LOC139839691),
            transcript variant X1, mRNA.
ACCESSION   XM_071829822
VERSION     XM_071829822.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3024
                     /gene="LOC139839691"
                     /note="methylmalonate-semialdehyde dehydrogenase
                     [acylating], mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839691"
     CDS             342..2759
                     /gene="LOC139839691"
                     /codon_start=1
                     /product="methylmalonate-semialdehyde dehydrogenase
                     [acylating], mitochondrial-like isoform X1"
                     /protein_id="XP_071685923.1"
                     /db_xref="GeneID:139839691"
                     /translation="MDEYAVSDTPQMLPPPPGSFLDREELIQHVGEFGVSQGYVVTIK
                     QSKKEKVVVLGCQRGGVYRNRRKSIDDGTGELVRKRKSGSRLTNCPFELIGRKDDGFW
                     VLSVKNGSHNHEPLTDINQHPSARRFTENEVLLIKEMTDAGLKPRQILKRLRQHNPEL
                     LSTPKHVYNIKTKLRQGNLTVRRYKTLRPQTTAQGHSNSSTTSEPSWRQRYPPRVPNF
                     IGGMFIDSQSRTSIDVLNPATQQVVSQVPLTTGEEFRAAVFAAKCSLPSWRNTPVMTR
                     QRIMFKFQELIRRDIDKIAQNITSEQGKTLKDARNEMLRGMEVVELACGMTNLQMGDF
                     VSNIRSGVDSYSLREPLGVCAGICPSNFPALVPLLMFPIAVACGNTFILKPSEKDPGA
                     CMILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIKAITFVGPDSSGSHIHARASS
                     NGKRVQSNIGAKNHAIVMPDANMGATLDALAAAGFGAAGQRCTALSSVVFVGAARSWE
                     EKLVDRAKALKVNVGTDADTDLGPVINKTAKEKVNRLIQTGIDAGARLILDGRHIEVP
                     KYEMGNFVGPTILSDVTDGMLCYKEEITGPVLLCMQAESLEQAISIINRNRYGFGASI
                     FTKNGASARKFQTDIEAGQVGVNVPVPAPLPFFSFTGTEASFSGDLNFHVSGKSGVNF
                     YTQIKTVNQQWKDFRNNDEIPLEMPPTNFQSTDGTSLLLPTHNFPDTDDGGHLASPSD
                     NLQCDNGPSFTIPHKDFQTNEAVSLGLQLRDFQNSDGVSPSLLMSDGSQDPKFLSHFL
                     NWTRNAQ"
     misc_feature    435..683
                     /gene="LOC139839691"
                     /note="FAR1 DNA-binding domain; Region: FAR1; pfam03101"
                     /db_xref="CDD:335217"
     misc_feature    984..2420
                     /gene="LOC139839691"
                     /note="Methylmalonate semialdehyde dehydrogenase and ALDH
                     family members 6A1 and 6B2; Region: ALDH_F6_MMSDH;
                     cd07085"
                     /db_xref="CDD:143404"
     misc_feature    order(1155..1157,1161..1163,1173..1175,1182..1184,
                     1194..1196,1293..1295,1302..1307,1332..1355,1368..1370,
                     1377..1379,1386..1388,1665..1667,1677..1679,1686..1688,
                     1695..1697,1701..1703,2220..2222,2226..2231,2235..2240,
                     2247..2249,2256..2261,2265..2267,2271..2282,2307..2309,
                     2319..2321,2325..2327,2373..2375,2394..2411,2415..2420)
                     /gene="LOC139839691"
                     /note="tetrameric interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:143404"
     misc_feature    order(1413..1424,1446..1448,1491..1493,1500..1502,
                     1590..1592,1641..1652,1659..1661,1713..1721,1815..1817,
                     2115..2117,2121..2123,2199..2201)
                     /gene="LOC139839691"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:143404"
     misc_feature    order(1422..1424,1713..1715,1806..1808,1815..1817)
                     /gene="LOC139839691"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143404"
ORIGIN      
        1 tgtcataaac aagtataaca tgtaagaatt aatgaattta gggtttagac gctctatatg
       61 tcattttact gttttaagtt agcagtttgc tttaccatgt acccgaatta gatcgattga
      121 tgttgcttac atattaaaat gttactgttg tatcattgat ttagcagtag attgttaaac
      181 ggtttattgc tgtagtgcag gaaacttggt cgtatagtga attcaaatgt gatttcgtct
      241 tcggtaaaaa cttagatatt gatatccaga ggtgatttgg taacgtcggt ttacaagcct
      301 cgtgattgtt ttgtggcatc cgcgacggta cctgctcggt gatggacgag tatgcagttt
      361 cagatacccc acaaatgctt ccacctccac ctggcagttt cctcgatcgt gaagaactta
      421 ttcaacatgt tggggaattt ggtgtctctc agggatatgt tgtaactatt aaacaatcaa
      481 aaaaggagaa agttgtagtt cttggatgcc aaagaggagg tgtttatagg aacaggcgta
      541 aatcgattga cgacgggaca ggtgaacttg ttcgcaaaag aaaatctggt tcccggctta
      601 caaattgtcc ttttgaacta atcggtagaa aggatgatgg tttttgggta ctgtcagtta
      661 agaatggttc acacaatcac gaacctttaa ctgatatcaa tcagcatcca tccgctcgcc
      721 gttttacaga gaatgaggta ttacttatta aggagatgac agatgctggc ttaaaaccac
      781 gtcaaatttt aaagagactg agacagcata atccagagct tttatcaact ccaaagcatg
      841 tttataatat caaaaccaag cttcgtcaag gaaatctcac agttagaaga tataaaacat
      901 tgagacctca gacaacagct caaggacact ctaattcgtc aacaacgtca gaaccatctt
      961 ggagacagcg ttatcctcct cgggtaccaa attttattgg tggtatgttc atagactcac
     1021 aatcaagaac gtctatcgat gtgttaaatc ctgcaaccca acaagttgta tctcaagttc
     1081 ctctaaccac tggcgaagag ttcagggcag cagtatttgc agctaaatgc tctcttccat
     1141 catggcggaa cactcctgtc atgacacgtc agcgtatcat gttcaagttt caggaactta
     1201 ttcgtcgaga cattgataag attgctcaaa acataacttc agagcaggga aaaacgttaa
     1261 aggatgcacg caatgaaatg cttcgtggaa tggaggtggt tgaacttgca tgtgggatga
     1321 caaacctcca aatgggggat tttgtttcaa atatacgaag tggagttgat agctacagcc
     1381 tgagggaacc acttggtgtt tgtgccggaa tatgcccttc taactttcca gcattggttc
     1441 ctttattgat gtttccaatt gcagtggcat gtggtaatac atttatcctt aagccatcgg
     1501 agaaagatcc aggggcttgc atgatacttg cagaattagc aatggaggct ggcttgccca
     1561 acggtgtact aaatatagtt catggaacca acgatattgt gaatgccatc tgtgatgacg
     1621 atgatatcaa agctataaca tttgttggtc cagattcttc tggatcacat attcatgcaa
     1681 gagcatcttc caatggcaaa cgtgtacagt caaatatagg tgcaaaaaac catgccattg
     1741 tcatgcctga cgcaaatatg ggtgctactt tggatgcgct tgctgctgcc ggtttcggtg
     1801 ctgccggaca aaggtgtaca gcattgagta gtgttgtatt tgtcggagct gcaagatcat
     1861 gggaggaaaa attagtggat cgtgcaaaag cacttaaagt aaacgttgga actgatgctg
     1921 atacggatct tggcccggtt attaacaaaa cggcaaaaga aaaggtaaac agattaatcc
     1981 aaacgggtat cgatgctggt gctaggttaa ttcttgatgg aaggcacatt gaggttccaa
     2041 aatatgagat gggaaatttt gtcggcccca ctatcttatc tgatgttaca gatggtatgc
     2101 tgtgttacaa ggaggagatt actggcccag ttcttctctg tatgcaggct gaaagcttag
     2161 agcaagccat aagtattatc aacagaaatc ggtatggctt tggggcatca atattcacta
     2221 agaatggtgc gtcagcaagg aaatttcaaa ctgacataga agctggccag gttggtgtaa
     2281 acgtccctgt tcctgcccca cttccgttct tctcttttac tgggacagaa gcatcctttt
     2341 caggagatct aaacttccat gtttcaggga agtcgggggt aaacttttac acacagatta
     2401 agacggtgaa tcaacaatgg aaagacttca ggaataacga cgaaataccc cttgaaatgc
     2461 ctcctaccaa ttttcagagt actgatggaa cgtcattatt actaccaacc cataattttc
     2521 ccgatacaga tgatggggga cacctggcgt ccccgtcaga taatcttcaa tgtgataatg
     2581 gaccgtcctt cactatacca cataaggact ttcagactaa tgaagccgtg tctctaggct
     2641 tgcaactgag agattttcag aatagtgatg gagtttctcc ttcattgctc atgtcggacg
     2701 gatcacagga cccaaagttc ttgagccatt ttcttaattg gacccgaaac gcacaataaa
     2761 attcaggttg tcaatgaagc gggcggaagc tgttcgaatc gggagcagca tcaacatttg
     2821 agtattgaat tgtgtaaagc tgtatttggg tattattcac atgtgaatta aaatcacgag
     2881 gttcatgaat gtatttcgac ccttgtgctt agttgattgt tatatattag tagtaacatt
     2941 gaacaaggtt gagtcaggtt atatactaac tgaggtatct gatatatgag attcttgctt
     3001 ctaaatgaag gattgaactt cgat
//
LOCUS       XM_071829823            2903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides methylmalonate-semialdehyde
            dehydrogenase [acylating], mitochondrial-like (LOC139839691),
            transcript variant X2, mRNA.
ACCESSION   XM_071829823
VERSION     XM_071829823.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2903
                     /gene="LOC139839691"
                     /note="methylmalonate-semialdehyde dehydrogenase
                     [acylating], mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839691"
     CDS             221..2638
                     /gene="LOC139839691"
                     /codon_start=1
                     /product="methylmalonate-semialdehyde dehydrogenase
                     [acylating], mitochondrial-like isoform X1"
                     /protein_id="XP_071685924.1"
                     /db_xref="GeneID:139839691"
                     /translation="MDEYAVSDTPQMLPPPPGSFLDREELIQHVGEFGVSQGYVVTIK
                     QSKKEKVVVLGCQRGGVYRNRRKSIDDGTGELVRKRKSGSRLTNCPFELIGRKDDGFW
                     VLSVKNGSHNHEPLTDINQHPSARRFTENEVLLIKEMTDAGLKPRQILKRLRQHNPEL
                     LSTPKHVYNIKTKLRQGNLTVRRYKTLRPQTTAQGHSNSSTTSEPSWRQRYPPRVPNF
                     IGGMFIDSQSRTSIDVLNPATQQVVSQVPLTTGEEFRAAVFAAKCSLPSWRNTPVMTR
                     QRIMFKFQELIRRDIDKIAQNITSEQGKTLKDARNEMLRGMEVVELACGMTNLQMGDF
                     VSNIRSGVDSYSLREPLGVCAGICPSNFPALVPLLMFPIAVACGNTFILKPSEKDPGA
                     CMILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIKAITFVGPDSSGSHIHARASS
                     NGKRVQSNIGAKNHAIVMPDANMGATLDALAAAGFGAAGQRCTALSSVVFVGAARSWE
                     EKLVDRAKALKVNVGTDADTDLGPVINKTAKEKVNRLIQTGIDAGARLILDGRHIEVP
                     KYEMGNFVGPTILSDVTDGMLCYKEEITGPVLLCMQAESLEQAISIINRNRYGFGASI
                     FTKNGASARKFQTDIEAGQVGVNVPVPAPLPFFSFTGTEASFSGDLNFHVSGKSGVNF
                     YTQIKTVNQQWKDFRNNDEIPLEMPPTNFQSTDGTSLLLPTHNFPDTDDGGHLASPSD
                     NLQCDNGPSFTIPHKDFQTNEAVSLGLQLRDFQNSDGVSPSLLMSDGSQDPKFLSHFL
                     NWTRNAQ"
     misc_feature    314..562
                     /gene="LOC139839691"
                     /note="FAR1 DNA-binding domain; Region: FAR1; pfam03101"
                     /db_xref="CDD:335217"
     misc_feature    863..2299
                     /gene="LOC139839691"
                     /note="Methylmalonate semialdehyde dehydrogenase and ALDH
                     family members 6A1 and 6B2; Region: ALDH_F6_MMSDH;
                     cd07085"
                     /db_xref="CDD:143404"
     misc_feature    order(1034..1036,1040..1042,1052..1054,1061..1063,
                     1073..1075,1172..1174,1181..1186,1211..1234,1247..1249,
                     1256..1258,1265..1267,1544..1546,1556..1558,1565..1567,
                     1574..1576,1580..1582,2099..2101,2105..2110,2114..2119,
                     2126..2128,2135..2140,2144..2146,2150..2161,2186..2188,
                     2198..2200,2204..2206,2252..2254,2273..2290,2294..2299)
                     /gene="LOC139839691"
                     /note="tetrameric interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:143404"
     misc_feature    order(1292..1303,1325..1327,1370..1372,1379..1381,
                     1469..1471,1520..1531,1538..1540,1592..1600,1694..1696,
                     1994..1996,2000..2002,2078..2080)
                     /gene="LOC139839691"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:143404"
     misc_feature    order(1301..1303,1592..1594,1685..1687,1694..1696)
                     /gene="LOC139839691"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143404"
ORIGIN      
        1 aagaaaaaca acagaccctt caatttaact agtttacttt catcgatctc atcaggtcta
       61 ttcagagtcc ggtatccagg aaacttggtc gtatagtgaa ttcaaatgtg atttcgtctt
      121 cggtaaaaac ttagatattg atatccagag gtgatttggt aacgtcggtt tacaagcctc
      181 gtgattgttt tgtggcatcc gcgacggtac ctgctcggtg atggacgagt atgcagtttc
      241 agatacccca caaatgcttc cacctccacc tggcagtttc ctcgatcgtg aagaacttat
      301 tcaacatgtt ggggaatttg gtgtctctca gggatatgtt gtaactatta aacaatcaaa
      361 aaaggagaaa gttgtagttc ttggatgcca aagaggaggt gtttatagga acaggcgtaa
      421 atcgattgac gacgggacag gtgaacttgt tcgcaaaaga aaatctggtt cccggcttac
      481 aaattgtcct tttgaactaa tcggtagaaa ggatgatggt ttttgggtac tgtcagttaa
      541 gaatggttca cacaatcacg aacctttaac tgatatcaat cagcatccat ccgctcgccg
      601 ttttacagag aatgaggtat tacttattaa ggagatgaca gatgctggct taaaaccacg
      661 tcaaatttta aagagactga gacagcataa tccagagctt ttatcaactc caaagcatgt
      721 ttataatatc aaaaccaagc ttcgtcaagg aaatctcaca gttagaagat ataaaacatt
      781 gagacctcag acaacagctc aaggacactc taattcgtca acaacgtcag aaccatcttg
      841 gagacagcgt tatcctcctc gggtaccaaa ttttattggt ggtatgttca tagactcaca
      901 atcaagaacg tctatcgatg tgttaaatcc tgcaacccaa caagttgtat ctcaagttcc
      961 tctaaccact ggcgaagagt tcagggcagc agtatttgca gctaaatgct ctcttccatc
     1021 atggcggaac actcctgtca tgacacgtca gcgtatcatg ttcaagtttc aggaacttat
     1081 tcgtcgagac attgataaga ttgctcaaaa cataacttca gagcagggaa aaacgttaaa
     1141 ggatgcacgc aatgaaatgc ttcgtggaat ggaggtggtt gaacttgcat gtgggatgac
     1201 aaacctccaa atgggggatt ttgtttcaaa tatacgaagt ggagttgata gctacagcct
     1261 gagggaacca cttggtgttt gtgccggaat atgcccttct aactttccag cattggttcc
     1321 tttattgatg tttccaattg cagtggcatg tggtaataca tttatcctta agccatcgga
     1381 gaaagatcca ggggcttgca tgatacttgc agaattagca atggaggctg gcttgcccaa
     1441 cggtgtacta aatatagttc atggaaccaa cgatattgtg aatgccatct gtgatgacga
     1501 tgatatcaaa gctataacat ttgttggtcc agattcttct ggatcacata ttcatgcaag
     1561 agcatcttcc aatggcaaac gtgtacagtc aaatataggt gcaaaaaacc atgccattgt
     1621 catgcctgac gcaaatatgg gtgctacttt ggatgcgctt gctgctgccg gtttcggtgc
     1681 tgccggacaa aggtgtacag cattgagtag tgttgtattt gtcggagctg caagatcatg
     1741 ggaggaaaaa ttagtggatc gtgcaaaagc acttaaagta aacgttggaa ctgatgctga
     1801 tacggatctt ggcccggtta ttaacaaaac ggcaaaagaa aaggtaaaca gattaatcca
     1861 aacgggtatc gatgctggtg ctaggttaat tcttgatgga aggcacattg aggttccaaa
     1921 atatgagatg ggaaattttg tcggccccac tatcttatct gatgttacag atggtatgct
     1981 gtgttacaag gaggagatta ctggcccagt tcttctctgt atgcaggctg aaagcttaga
     2041 gcaagccata agtattatca acagaaatcg gtatggcttt ggggcatcaa tattcactaa
     2101 gaatggtgcg tcagcaagga aatttcaaac tgacatagaa gctggccagg ttggtgtaaa
     2161 cgtccctgtt cctgccccac ttccgttctt ctcttttact gggacagaag catccttttc
     2221 aggagatcta aacttccatg tttcagggaa gtcgggggta aacttttaca cacagattaa
     2281 gacggtgaat caacaatgga aagacttcag gaataacgac gaaatacccc ttgaaatgcc
     2341 tcctaccaat tttcagagta ctgatggaac gtcattatta ctaccaaccc ataattttcc
     2401 cgatacagat gatgggggac acctggcgtc cccgtcagat aatcttcaat gtgataatgg
     2461 accgtccttc actataccac ataaggactt tcagactaat gaagccgtgt ctctaggctt
     2521 gcaactgaga gattttcaga atagtgatgg agtttctcct tcattgctca tgtcggacgg
     2581 atcacaggac ccaaagttct tgagccattt tcttaattgg acccgaaacg cacaataaaa
     2641 ttcaggttgt caatgaagcg ggcggaagct gttcgaatcg ggagcagcat caacatttga
     2701 gtattgaatt gtgtaaagct gtatttgggt attattcaca tgtgaattaa aatcacgagg
     2761 ttcatgaatg tatttcgacc cttgtgctta gttgattgtt atatattagt agtaacattg
     2821 aacaaggttg agtcaggtta tatactaact gaggtatctg atatatgaga ttcttgcttc
     2881 taaatgaagg attgaacttc gat
//
LOCUS       XM_071829825            3016 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides methylmalonate-semialdehyde
            dehydrogenase [acylating], mitochondrial-like (LOC139839691),
            transcript variant X3, mRNA.
ACCESSION   XM_071829825
VERSION     XM_071829825.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3016
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3016
                     /gene="LOC139839691"
                     /note="methylmalonate-semialdehyde dehydrogenase
                     [acylating], mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139839691"
     CDS             340..2751
                     /gene="LOC139839691"
                     /codon_start=1
                     /product="methylmalonate-semialdehyde dehydrogenase
                     [acylating], mitochondrial-like isoform X2"
                     /protein_id="XP_071685926.1"
                     /db_xref="GeneID:139839691"
                     /translation="MDEYAVSDTPQMLPPPPGSFLDREELIQHVGEFGVSQGYVVTIK
                     QSKKEKVVVLGCQRGGVYRNRRKSIDDGTGELVRKRKSGSRLTNCPFELIGRKDDGFW
                     VLSVKNGSHNHEPLTDINQHPSARRFTENEVLLIKEMTDAGLKPRQILKRLRQHNPEL
                     LSTPKHVYNIKTKLRQGNLTVRRYKTLRPQTTAQGHSNSSTTSEPSWRQRYPPRVPNF
                     IGGMFIDSQSRTSIDVLNPATQQVVSQVPLTTGEEFRAAVFAAKCSLPSWRNTPVMTR
                     QRIMFKFQELIRRDIDKIAQNITSEQGKTLKDARNEMLRGMEVVELACGMTNLQMGDF
                     VSNIRSGVDSYSLREPLGVCAGICPSNFPALVPLLMFPIAVACGNTFILKPSEKDPGA
                     CMILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIKAITFVGPDSSGSHIHARASS
                     NGKRVQSNIGAKNHAIVMPDANMGATLDALAAAGFGAAGQRCTALSSVVFVGAARSWE
                     EKLVDRAKALKVNVGTDADTDLGPVINKTAKEKVNRLIQTGIDAGARLILDGRHIEVP
                     KYEMGNFVGPTILSDVTDGMLCYKEEITGPVLLCMQAESLEQAISIINRNRYGFGASI
                     FTKNGASARKFQTDIEAGQVGVNVPVPAPLPFFSFTGTEASFSGDLNFHGKSGVNFYT
                     QIKTVNQQWKDFRNNDEIPLEMPPTNFQSTDGTSLLLPTHNFPDTDDGGHLASPSDNL
                     QCDNGPSFTIPHKDFQTNEAVSLGLQLRDFQNSDGVSPSLLMSDGSQDPKFLSHFLNW
                     TRNAQ"
     misc_feature    433..681
                     /gene="LOC139839691"
                     /note="FAR1 DNA-binding domain; Region: FAR1; pfam03101"
                     /db_xref="CDD:335217"
     misc_feature    982..2412
                     /gene="LOC139839691"
                     /note="Methylmalonate semialdehyde dehydrogenase and ALDH
                     family members 6A1 and 6B2; Region: ALDH_F6_MMSDH;
                     cd07085"
                     /db_xref="CDD:143404"
     misc_feature    order(1153..1155,1159..1161,1171..1173,1180..1182,
                     1192..1194,1291..1293,1300..1305,1330..1353,1366..1368,
                     1375..1377,1384..1386,1663..1665,1675..1677,1684..1686,
                     1693..1695,1699..1701,2218..2220,2224..2229,2233..2238,
                     2245..2247,2254..2259,2263..2265,2269..2280,2305..2307,
                     2317..2319,2323..2325,2365..2367,2386..2403,2407..2412)
                     /gene="LOC139839691"
                     /note="tetrameric interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:143404"
     misc_feature    order(1411..1422,1444..1446,1489..1491,1498..1500,
                     1588..1590,1639..1650,1657..1659,1711..1719,1813..1815,
                     2113..2115,2119..2121,2197..2199)
                     /gene="LOC139839691"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:143404"
     misc_feature    order(1420..1422,1711..1713,1804..1806,1813..1815)
                     /gene="LOC139839691"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143404"
ORIGIN      
        1 tcataaacaa gtataacatg taagaattaa tgaatttagg gtttagacgc tctatatgtc
       61 attttactgt tttaagttag cagtttgctt taccatgtac ccgaattaga tcgattgatg
      121 ttgcttacat attaaaatgt tactgttgta tcattgattt agcagtagat tgttaaacgg
      181 tttattgctg tagtgcagga aacttggtcg tatagtgaat tcaaatgtga tttcgtcttc
      241 ggtaaaaact tagatattga tatccagagg tgatttggta acgtcggttt acaagcctcg
      301 tgattgtttt gtggcatccg cgacggtacc tgctcggtga tggacgagta tgcagtttca
      361 gataccccac aaatgcttcc acctccacct ggcagtttcc tcgatcgtga agaacttatt
      421 caacatgttg gggaatttgg tgtctctcag ggatatgttg taactattaa acaatcaaaa
      481 aaggagaaag ttgtagttct tggatgccaa agaggaggtg tttataggaa caggcgtaaa
      541 tcgattgacg acgggacagg tgaacttgtt cgcaaaagaa aatctggttc ccggcttaca
      601 aattgtcctt ttgaactaat cggtagaaag gatgatggtt tttgggtact gtcagttaag
      661 aatggttcac acaatcacga acctttaact gatatcaatc agcatccatc cgctcgccgt
      721 tttacagaga atgaggtatt acttattaag gagatgacag atgctggctt aaaaccacgt
      781 caaattttaa agagactgag acagcataat ccagagcttt tatcaactcc aaagcatgtt
      841 tataatatca aaaccaagct tcgtcaagga aatctcacag ttagaagata taaaacattg
      901 agacctcaga caacagctca aggacactct aattcgtcaa caacgtcaga accatcttgg
      961 agacagcgtt atcctcctcg ggtaccaaat tttattggtg gtatgttcat agactcacaa
     1021 tcaagaacgt ctatcgatgt gttaaatcct gcaacccaac aagttgtatc tcaagttcct
     1081 ctaaccactg gcgaagagtt cagggcagca gtatttgcag ctaaatgctc tcttccatca
     1141 tggcggaaca ctcctgtcat gacacgtcag cgtatcatgt tcaagtttca ggaacttatt
     1201 cgtcgagaca ttgataagat tgctcaaaac ataacttcag agcagggaaa aacgttaaag
     1261 gatgcacgca atgaaatgct tcgtggaatg gaggtggttg aacttgcatg tgggatgaca
     1321 aacctccaaa tgggggattt tgtttcaaat atacgaagtg gagttgatag ctacagcctg
     1381 agggaaccac ttggtgtttg tgccggaata tgcccttcta actttccagc attggttcct
     1441 ttattgatgt ttccaattgc agtggcatgt ggtaatacat ttatccttaa gccatcggag
     1501 aaagatccag gggcttgcat gatacttgca gaattagcaa tggaggctgg cttgcccaac
     1561 ggtgtactaa atatagttca tggaaccaac gatattgtga atgccatctg tgatgacgat
     1621 gatatcaaag ctataacatt tgttggtcca gattcttctg gatcacatat tcatgcaaga
     1681 gcatcttcca atggcaaacg tgtacagtca aatataggtg caaaaaacca tgccattgtc
     1741 atgcctgacg caaatatggg tgctactttg gatgcgcttg ctgctgccgg tttcggtgct
     1801 gccggacaaa ggtgtacagc attgagtagt gttgtatttg tcggagctgc aagatcatgg
     1861 gaggaaaaat tagtggatcg tgcaaaagca cttaaagtaa acgttggaac tgatgctgat
     1921 acggatcttg gcccggttat taacaaaacg gcaaaagaaa aggtaaacag attaatccaa
     1981 acgggtatcg atgctggtgc taggttaatt cttgatggaa ggcacattga ggttccaaaa
     2041 tatgagatgg gaaattttgt cggccccact atcttatctg atgttacaga tggtatgctg
     2101 tgttacaagg aggagattac tggcccagtt cttctctgta tgcaggctga aagcttagag
     2161 caagccataa gtattatcaa cagaaatcgg tatggctttg gggcatcaat attcactaag
     2221 aatggtgcgt cagcaaggaa atttcaaact gacatagaag ctggccaggt tggtgtaaac
     2281 gtccctgttc ctgccccact tccgttcttc tcttttactg ggacagaagc atccttttca
     2341 ggagatctaa acttccatgg gaagtcgggg gtaaactttt acacacagat taagacggtg
     2401 aatcaacaat ggaaagactt caggaataac gacgaaatac cccttgaaat gcctcctacc
     2461 aattttcaga gtactgatgg aacgtcatta ttactaccaa cccataattt tcccgataca
     2521 gatgatgggg gacacctggc gtccccgtca gataatcttc aatgtgataa tggaccgtcc
     2581 ttcactatac cacataagga ctttcagact aatgaagccg tgtctctagg cttgcaactg
     2641 agagattttc agaatagtga tggagtttct ccttcattgc tcatgtcgga cggatcacag
     2701 gacccaaagt tcttgagcca ttttcttaat tggacccgaa acgcacaata aaattcaggt
     2761 tgtcaatgaa gcgggcggaa gctgttcgaa tcgggagcag catcaacatt tgagtattga
     2821 attgtgtaaa gctgtatttg ggtattattc acatgtgaat taaaatcacg aggttcatga
     2881 atgtatttcg acccttgtgc ttagttgatt gttatatatt agtagtaaca ttgaacaagg
     2941 ttgagtcagg ttatatacta actgaggtat ctgatatatg agattcttgc ttctaaatga
     3001 aggattgaac ttcgat
//
LOCUS       XM_071829826            2146 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fatty acid amide
            hydrolase-like (LOC139839692), mRNA.
ACCESSION   XM_071829826
VERSION     XM_071829826.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2146
                     /gene="LOC139839692"
                     /note="fatty acid amide hydrolase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139839692"
     CDS             139..1962
                     /gene="LOC139839692"
                     /codon_start=1
                     /product="fatty acid amide hydrolase-like"
                     /protein_id="XP_071685927.1"
                     /db_xref="GeneID:139839692"
                     /translation="MGKTKRVMLPVTEVDLTVIKYNASQIEAPHITGLALKLFVMLVE
                     LPLIGSLILSYLKKQNKINEMLRDTVIPEPPMFRPEFLPQEPESGVVFLKEDEKSEDR
                     VEIATRCLPQYDSANNLGSDSTPFRYWKIRDYAYSYRSKITTPSMVAEHVICAIEESS
                     NTKPATLMLISFDPEDVRKQASASTQRFEEGKPLSILDGIFVAIKDDIDCYPYPSNGG
                     TTWLHEVHSVKKDAVSVSRLRRCGAILVGKANMHELGMGTTGVNPNYGSARNPHDLKR
                     YTGGSSSGPAAIVASGICSAALGTDGGGSIRVPSSLCGVIGLKTTYGRTDIKGSLCDG
                     ATVTVIGPIASNVEDIILIYAAILGSSRDDKISLHPSTPCLPDLSLHENTSVVGGLRL
                     GKYTEWFNDVFSPDISNKCEDALNLFSETYACKVVEIVIPELDEMQTAHVVSYGSEAA
                     ASLMPDLQDGKGKKLTLDSRVNFALFNTFTSSDYVAAQRLRRRIMYYHTELFKNVDVI
                     VTPTTGMTAPLIPESALKSGESNLNVTANLMRFSLAANLLGFPAISVPVGYDKQGLPI
                     GLQIIGGPWCEASILRMAAAFEGLRMETKQPASYFDILKKV"
     misc_feature    550..1902
                     /gene="LOC139839692"
                     /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
                     or related amidase [Translation, ribosomal structure and
                     biogenesis]; Region: GatA; COG0154"
                     /db_xref="CDD:439924"
     polyA_site      2146
                     /gene="LOC139839692"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaactgcata ttttttttca aatcattaac ctcgtcaaag ggaattccga tgtcatcaat
       61 cgtcatcacg tgatctacat aaaacaagta caattacaat ctatgtttat ttccccctaa
      121 ttcctcacca tcaaaattat ggggaagaca aagagagtta tgctgcctgt tactgaagtt
      181 gacttgactg ttattaagta taatgcttca caaattgaag cgcctcatat aactgggtta
      241 gcccttaagt tatttgttat gttagttgaa ttgcctttga ttggttcgtt gatccttagt
      301 tacctgaaga aacaaaacaa aatcaatgag atgttaagag atactgtgat acccgaacca
      361 ccaatgttta gacctgagtt ccttcctcaa gagccagaat ctggagtggt tttcctcaaa
      421 gaagacgaaa aatccgagga ccgtgttgaa atagccaccc gatgtcttcc gcaatatgat
      481 tctgctaaca atcttggctc tgactcgact cctttcagat actggaagat tcgtgattat
      541 gcgtattcgt acaggtcaaa gattacaact ccatcgatgg ttgcagagca tgtgatatgt
      601 gcaatcgaag agtctagcaa tacgaaacct gcaactctta tgctgatttc gtttgatccc
      661 gaagatgttc gaaaacaggc ttcagcttcc acacaacggt ttgaggaagg aaagcctttg
      721 tcaatattag atggtatatt tgtggcgatc aaggatgaca tagattgtta tccctatccg
      781 tctaatggtg gtacaacatg gcttcatgag gtacacagtg ttaagaaaga tgcagtttct
      841 gtttcaagat taaggagatg tggggccata ttggttggaa aagccaatat gcatgaattg
      901 ggtatgggta caaccggagt taacccaaac tacggatctg ctcgcaatcc acatgatcta
      961 aaacggtata caggtggatc ttcatcgggc cccgcagcga ttgtagcttc cgggatatgt
     1021 tcggctgcgt tgggaacaga cggtggaggt tcaattcgcg ttccttcttc tctttgtggt
     1081 gtcatagggt tgaaaacaac atacggtcga accgacatta agggttcttt atgtgatgga
     1141 gcaactgtaa cagttatagg tccaattgca tccaatgttg aagatattat acttatatat
     1201 gcagcaatct taggatcttc tcgtgatgat aaaataagtc tgcatccgtc taccccttgc
     1261 ttacctgatt tatcattgca tgaaaacacc agtgttgtgg gaggattgcg gttaggaaag
     1321 tacacagagt ggtttaatga tgtgttttca cctgatatat caaacaaatg tgaagatgct
     1381 cttaatttgt tctcagaaac ttatgcttgc aaagtagtag agattgtaat tccggagctt
     1441 gatgagatgc aaacagccca tgttgtatct tatggttctg aagcggcagc ctcattaatg
     1501 cctgaccttc aggatgggaa gggtaaaaag cttacacttg actcacgcgt taattttgca
     1561 ctttttaaca cattcacatc ttcagattat gttgccgctc aacgtctcag gcgcaggatt
     1621 atgtactacc acactgagct tttcaagaac gttgatgtca tagttactcc aactactggc
     1681 atgacagctc ctttaattcc cgaaagtgca cttaagtcgg gggagtctaa tttaaatgtt
     1741 acagctaatc tgatgcgttt cagcttagca gcaaatcttc ttggattccc agcaatttct
     1801 gtacctgttg gctatgacaa gcaagggctt ccaataggat tgcaaattat tggcggtcca
     1861 tggtgtgaag cttcaatatt gcgtatggct gctgcgtttg agggattacg aatggagacg
     1921 aagcaacctg catcatattt tgatattctg aagaaagtgt gagatgcagg gggtcacact
     1981 tattgttgaa gtcatagaca gccttgttgt gtggactcaa ttgtgatttg ttttctgttt
     2041 ttcttttact gtaataattg ctagttttgt ataaactagc gaatatatat gattgaaata
     2101 aattttacaa atgtagggta tatataatat agtgtaaggt tcaatc
//
LOCUS       XM_071829827            2213 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fatty acid amide
            hydrolase-like (LOC139839693), transcript variant X1, mRNA.
ACCESSION   XM_071829827
VERSION     XM_071829827.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2213
                     /gene="LOC139839693"
                     /note="fatty acid amide hydrolase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139839693"
     CDS             138..1961
                     /gene="LOC139839693"
                     /codon_start=1
                     /product="fatty acid amide hydrolase-like"
                     /protein_id="XP_071685928.1"
                     /db_xref="GeneID:139839693"
                     /translation="MGNTKRVMLPVTEVDLTAIKYDPLRIEAPHITGLALKFFVKLVE
                     LPLIGSLIIGHLKKQNKMNEMLRDTVIPEPPMFRPEFPPQEPESGVVFLKEDEKSEDR
                     VEIATGCLPQYDPANNLGSDSTTFRYWKIRDYAYSYRSKITTPSMLAEHVICAIEEFS
                     NTKPATPLLISFDAEDVRKQASASTQRFEEGNPLSILDGIFVAIKDDIDCYPHPSNGA
                     TTWLHEVRRVKKDAVSVSRLRRCGAILVGKANMHELGMGTTGVNPNYGSARNPHDLKR
                     YTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTDIKGALCDG
                     GTVEIIGPIASNVEDIILIYATIFGSSPADKISLNPSTPCLPDLSSHENSRILGSLRL
                     GKYTEWFNDVFSPDISNNCEDALNMFSETHGSKVVEIVIPELDEMRTAHIVSIGSEAA
                     ASLMPDLQDGKGKKLTLDSRINFALFNSFTSSDYVAAQRIRRRIMYYHTELFKNVDVI
                     ITPTTGMTAPLIPESALKLGESNMKVTANLMRFIVSANLLGFPAISVPVGYDKQGLPI
                     GLQIIGRPWCEASILRLAAAFEGLRMETKKPASYFDILKLT"
     misc_feature    549..1901
                     /gene="LOC139839693"
                     /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
                     or related amidase [Translation, ribosomal structure and
                     biogenesis]; Region: GatA; COG0154"
                     /db_xref="CDD:439924"
     polyA_site      2213
                     /gene="LOC139839693"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acgcaattaa cctcgtcaat gggaattacg atgtcatcaa tcgtcatcac gttattatta
       61 ttattatcta gataaaataa caactacaat ctgtgtttat ttctctctaa ttcttcacca
      121 tcaaaccatc aaaaattatg gggaatacaa agagagttat gttgcctgtt actgaagttg
      181 atttaactgc catcaagtat gatcctttac ggattgaagc gcctcatata actgggttag
      241 ctcttaagtt ctttgttaag ttagttgaat tgcctttgat tggttctttg atcattggtc
      301 acctgaagaa acaaaacaag atgaatgaga tgttaagaga tactgtgata cccgagccac
      361 caatgttcag acctgagttc cctcctcaag agccggaatc tggagtggtt ttcctcaaag
      421 aagacgaaaa atctgaggac cgtgttgaaa tagccactgg atgtcttccg caatacgatc
      481 ctgctaacaa tctcggttct gactcgacta ctttccgata ctggaagatt cgtgattatg
      541 cgtattcgta caggtcaaag attacgactc catcaatgct tgcagagcat gtcatatgtg
      601 caattgaaga gtttagcaat acgaaacctg caacacctct gctgatttcc tttgatgccg
      661 aggatgtaag aaaacaggct tcagcttcca cacaacggtt tgaggaagga aatcctttgt
      721 caatattaga tggtatcttt gtggcgatca aggatgatat agattgttat ccccatccat
      781 ctaatggtgc aacaacatgg cttcatgagg tacgccgtgt taagaaggat gcagtttctg
      841 tatcaaggtt aaggagatgt ggggccatat tggttggaaa agccaatatg catgaattgg
      901 gcatgggcac aaccggagtt aacccaaact atggatctgc tcgcaatcca catgatctga
      961 aaagatatac aggtggatct tcatcaggcc cagcagctat tgtagcttct ggaatatgtt
     1021 ctgctgcact cggaacagat ggtggaggtt cgattcgtat tccttcttct ctttgtggtg
     1081 tcgtaggatt gaaaacaact tatggtcgta ctgacatcaa aggtgcttta tgtgacggag
     1141 gaactgtgga aattataggt ccaattgcat ccaatgttga agatatcata ctcatctatg
     1201 caacaatctt cggatcttct cctgctgata aaattagtct gaatccgtct accccttgct
     1261 tacctgattt atcgtcgcat gaaaattcca gaattttggg atcattgcgg ttaggaaagt
     1321 acacagagtg gtttaatgat gtgttttcac ctgatatctc aaacaattgt gaagatgctc
     1381 ttaatatgtt ctcagaaact catggtagca aagtggttga gattgtaatt ccggagcttg
     1441 atgagatgcg aactgcacat attgtatcta ttggttctga agcagctgcc tcgttaatgc
     1501 cggaccttca agatgggaag ggtaaaaagc ttacacttga ctcgcgtatt aattttgcac
     1561 tttttaactc attcacatct tcggattatg ttgccgccca acgtatcaga cgcaggatta
     1621 tgtactacca cactgagctt ttcaagaacg ttgatgtcat aattactcca actactggca
     1681 tgacagctcc tttaattccc gaaagtgcac ttaagttggg ggagtctaat atgaaggtta
     1741 cagctaatct gatgcgtttc atcgtatcag ctaatcttct tgggttccca gctatttctg
     1801 tacctgttgg gtatgataag caagggcttc caataggatt gcagattata ggccgtccat
     1861 ggtgtgaagc ttcaatattg cgtttggctg ctgcgtttga gggactacgt atggagacga
     1921 agaaacctgc atcgtatttt gacattctga agctaacgtg agagatgcag ggtcaccctg
     1981 agtgttgata ttcattgaca cctttgttgt gtggactaaa taattaattc tttctgtatt
     2041 atcatccttc tatgataaaa aaaaaaaaaa aagataataa aaatatcaaa gacaactggt
     2101 ttgatttttt tttttttttt tttttttttg ttcgtgttat atttgtgtag ccaatataat
     2161 aaatctacta gggttgaaat aatgtacgag taatgtgcac acagtttggt tca
//
LOCUS       XM_071829828            2198 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fatty acid amide
            hydrolase-like (LOC139839693), transcript variant X2, mRNA.
ACCESSION   XM_071829828
VERSION     XM_071829828.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2198
                     /gene="LOC139839693"
                     /note="fatty acid amide hydrolase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139839693"
     CDS             123..1946
                     /gene="LOC139839693"
                     /codon_start=1
                     /product="fatty acid amide hydrolase-like"
                     /protein_id="XP_071685929.1"
                     /db_xref="GeneID:139839693"
                     /translation="MGNTKRVMLPVTEVDLTAIKYDPLRIEAPHITGLALKFFVKLVE
                     LPLIGSLIIGHLKKQNKMNEMLRDTVIPEPPMFRPEFPPQEPESGVVFLKEDEKSEDR
                     VEIATGCLPQYDPANNLGSDSTTFRYWKIRDYAYSYRSKITTPSMLAEHVICAIEEFS
                     NTKPATPLLISFDAEDVRKQASASTQRFEEGNPLSILDGIFVAIKDDIDCYPHPSNGA
                     TTWLHEVRRVKKDAVSVSRLRRCGAILVGKANMHELGMGTTGVNPNYGSARNPHDLKR
                     YTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTDIKGALCDG
                     GTVEIIGPIASNVEDIILIYATIFGSSPADKISLNPSTPCLPDLSSHENSRILGSLRL
                     GKYTEWFNDVFSPDISNNCEDALNMFSETHGSKVVEIVIPELDEMRTAHIVSIGSEAA
                     ASLMPDLQDGKGKKLTLDSRINFALFNSFTSSDYVAAQRIRRRIMYYHTELFKNVDVI
                     ITPTTGMTAPLIPESALKLGESNMKVTANLMRFIVSANLLGFPAISVPVGYDKQGLPI
                     GLQIIGRPWCEASILRLAAAFEGLRMETKKPASYFDILKLT"
     misc_feature    534..1886
                     /gene="LOC139839693"
                     /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
                     or related amidase [Translation, ribosomal structure and
                     biogenesis]; Region: GatA; COG0154"
                     /db_xref="CDD:439924"
     polyA_site      2198
                     /gene="LOC139839693"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttgacatta aatgtagtca ggagtgggta aagctgccac ccgaatcata cgtcactcat
       61 aaattcatag ttaatcagat gaccaacttc cggataccca agaacggcgt cgctttgaag
      121 ccatggggaa tacaaagaga gttatgttgc ctgttactga agttgattta actgccatca
      181 agtatgatcc tttacggatt gaagcgcctc atataactgg gttagctctt aagttctttg
      241 ttaagttagt tgaattgcct ttgattggtt ctttgatcat tggtcacctg aagaaacaaa
      301 acaagatgaa tgagatgtta agagatactg tgatacccga gccaccaatg ttcagacctg
      361 agttccctcc tcaagagccg gaatctggag tggttttcct caaagaagac gaaaaatctg
      421 aggaccgtgt tgaaatagcc actggatgtc ttccgcaata cgatcctgct aacaatctcg
      481 gttctgactc gactactttc cgatactgga agattcgtga ttatgcgtat tcgtacaggt
      541 caaagattac gactccatca atgcttgcag agcatgtcat atgtgcaatt gaagagttta
      601 gcaatacgaa acctgcaaca cctctgctga tttcctttga tgccgaggat gtaagaaaac
      661 aggcttcagc ttccacacaa cggtttgagg aaggaaatcc tttgtcaata ttagatggta
      721 tctttgtggc gatcaaggat gatatagatt gttatcccca tccatctaat ggtgcaacaa
      781 catggcttca tgaggtacgc cgtgttaaga aggatgcagt ttctgtatca aggttaagga
      841 gatgtggggc catattggtt ggaaaagcca atatgcatga attgggcatg ggcacaaccg
      901 gagttaaccc aaactatgga tctgctcgca atccacatga tctgaaaaga tatacaggtg
      961 gatcttcatc aggcccagca gctattgtag cttctggaat atgttctgct gcactcggaa
     1021 cagatggtgg aggttcgatt cgtattcctt cttctctttg tggtgtcgta ggattgaaaa
     1081 caacttatgg tcgtactgac atcaaaggtg ctttatgtga cggaggaact gtggaaatta
     1141 taggtccaat tgcatccaat gttgaagata tcatactcat ctatgcaaca atcttcggat
     1201 cttctcctgc tgataaaatt agtctgaatc cgtctacccc ttgcttacct gatttatcgt
     1261 cgcatgaaaa ttccagaatt ttgggatcat tgcggttagg aaagtacaca gagtggttta
     1321 atgatgtgtt ttcacctgat atctcaaaca attgtgaaga tgctcttaat atgttctcag
     1381 aaactcatgg tagcaaagtg gttgagattg taattccgga gcttgatgag atgcgaactg
     1441 cacatattgt atctattggt tctgaagcag ctgcctcgtt aatgccggac cttcaagatg
     1501 ggaagggtaa aaagcttaca cttgactcgc gtattaattt tgcacttttt aactcattca
     1561 catcttcgga ttatgttgcc gcccaacgta tcagacgcag gattatgtac taccacactg
     1621 agcttttcaa gaacgttgat gtcataatta ctccaactac tggcatgaca gctcctttaa
     1681 ttcccgaaag tgcacttaag ttgggggagt ctaatatgaa ggttacagct aatctgatgc
     1741 gtttcatcgt atcagctaat cttcttgggt tcccagctat ttctgtacct gttgggtatg
     1801 ataagcaagg gcttccaata ggattgcaga ttataggccg tccatggtgt gaagcttcaa
     1861 tattgcgttt ggctgctgcg tttgagggac tacgtatgga gacgaagaaa cctgcatcgt
     1921 attttgacat tctgaagcta acgtgagaga tgcagggtca ccctgagtgt tgatattcat
     1981 tgacaccttt gttgtgtgga ctaaataatt aattctttct gtattatcat ccttctatga
     2041 taaaaaaaaa aaaaaaagat aataaaaata tcaaagacaa ctggtttgat tttttttttt
     2101 tttttttttt ttttgttcgt gttatatttg tgtagccaat ataataaatc tactagggtt
     2161 gaaataatgt acgagtaatg tgcacacagt ttggttca
//
LOCUS       XR_011757030            1532 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839694), transcript variant X1, ncRNA.
ACCESSION   XR_011757030
VERSION     XR_011757030.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1532
                     /gene="LOC139839694"
                     /note="uncharacterized LOC139839694; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839694"
     ncRNA           1..1532
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839694"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839694"
ORIGIN      
        1 aacgcctcaa gtcaaattca gctctcagta acctcataaa accctagctc atcaccactt
       61 cagattttga agttctgtta tcatcacctc ttcagatcga agctcataac ggtaagatat
      121 aattaccttt tctccctgtc taatcgttca accaatagcg tagctaatca ccacttcaca
      181 tttatatatg taatcgactt ctcttatcct cacctcttca gatcgaagca gattaactgt
      241 aagatctgct tcttgttcgt ctagatctat taactgttcc cttccttttt caagtttcct
      301 tttgccgccc ttcaaaaccc taaatctact cccttggtgg tctctctgtt tctcgctgat
      361 gtattagtta cttttcggtt gttgtttgtt agatccgacg gctgtaactc tcttcgacgg
      421 ccgtttacgg atgcccgatc tttttctacc gttcgttgaa gtagccagtc atttctccga
      481 cgctgtttct ttgttttccg gctggtgctg ttgttagtac ataatcataa tttggtaaga
      541 cgaggtatat taacatgtat agagaaaaat tcaatgacgt ctaattcaac atcattcaat
      601 cacccaagct atcagcctat caatatgacg tgttcacgaa ctttaaaaca cttgtaaatc
      661 tcattctgag cctcactatg aacccatgga aatgctttca agtaagtttg cttattaatg
      721 gttgtgtttt aaagggttac ttgcgtcaga aagtcgtttc agacttagag aagagcttct
      781 agcggaccag aacagatttc aagcccaaac tatggttcat atcttggaat ctcgggctta
      841 gagacgagct gtgcatatta ctttagccga gttatagagg aaatccctgg atcaatcgcg
      901 agccctgttg gaggagcaag gcagaggccg aggttgaggc ccgtgccaga cttagagaag
      961 agcttccagc ggaccagaat agatttcaag cctaaactag gcccatctca tgaaatctcg
     1021 acctgagagt cgagctgtgc ataacatttt agctgagtta aaggcgaagt cgttggatag
     1081 cttgtctaaa gtgatatata tgcatagcct gtctctcagc ccgagttttc aagagatgtg
     1141 cctagttttg gcatgaaatc tcttctagtt cgctagaagc tattctctaa atctggcacg
     1201 ggccttagcc tcttcccggg ctttagtgtt gttgcaagaa actttaagag ccgcatacct
     1261 aacaaatgag aacaaaattt attagtctat ttaatgtaac aaatgagaaa aaaaaataga
     1321 gtttatttta tttcttcaat ttaatattta gtgttttatt ccaatctgaa ctttcgcgat
     1381 ttctcggttc ggattgcggg tgagtgttag tgaattaggt taggctcaat tctgatgtgg
     1441 gcttgggtct attagggttc ttaggattct agggtttgta atcctatata tatcgtatga
     1501 ataataaagt aatctcgagg gggtttcatt ga
//
LOCUS       XR_011757031            1497 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839694), transcript variant X2, ncRNA.
ACCESSION   XR_011757031
VERSION     XR_011757031.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1497
                     /gene="LOC139839694"
                     /note="uncharacterized LOC139839694; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839694"
     ncRNA           1..1497
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839694"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839694"
ORIGIN      
        1 aacgcctcaa gtcaaattca gctctcagta acctcataaa accctagctc atcaccactt
       61 cagattttga agttctgtta tcatcacctc ttcagatcga agctcataac ggtaagatat
      121 aattaccttt tctccctgtc taatcgttca accaatagcg tagctaatca ccacttcaca
      181 tttatatatg taatcgactt ctcttatcct cacctcttca gatcgaagca gattaactgt
      241 aagatctgct tcttgttcgt ctagatctat taactgttcc cttccttttt caagtttcct
      301 tttgccgccc ttcaaaaccc taaatctact cccttggtgg tctctctgtt tctcgctgat
      361 gtattagtta cttttcggtt gttgtttgtt agatccgacg gctgtaactc tcttcgacgg
      421 ccgtttacgg atgcccgatc tttttctacc gttcgttgaa gtagccagtc atttctccga
      481 cgctgtttct ttgttttccg gctgacgagg tatattaaca tgtatagaga aaaattcaat
      541 gacgtctaat tcaacatcat tcaatcaccc aagctatcag cctatcaata tgacgtgttc
      601 acgaacttta aaacacttgt aaatctcatt ctgagcctca ctatgaaccc atggaaatgc
      661 tttcaagtaa gtttgcttat taatggttgt gttttaaagg gttacttgcg tcagaaagtc
      721 gtttcagact tagagaagag cttctagcgg accagaacag atttcaagcc caaactatgg
      781 ttcatatctt ggaatctcgg gcttagagac gagctgtgca tattacttta gccgagttat
      841 agaggaaatc cctggatcaa tcgcgagccc tgttggagga gcaaggcaga ggccgaggtt
      901 gaggcccgtg ccagacttag agaagagctt ccagcggacc agaatagatt tcaagcctaa
      961 actaggccca tctcatgaaa tctcgacctg agagtcgagc tgtgcataac attttagctg
     1021 agttaaaggc gaagtcgttg gatagcttgt ctaaagtgat atatatgcat agcctgtctc
     1081 tcagcccgag ttttcaagag atgtgcctag ttttggcatg aaatctcttc tagttcgcta
     1141 gaagctattc tctaaatctg gcacgggcct tagcctcttc ccgggcttta gtgttgttgc
     1201 aagaaacttt aagagccgca tacctaacaa atgagaacaa aatttattag tctatttaat
     1261 gtaacaaatg agaaaaaaaa atagagttta ttttatttct tcaatttaat atttagtgtt
     1321 ttattccaat ctgaactttc gcgatttctc ggttcggatt gcgggtgagt gttagtgaat
     1381 taggttaggc tcaattctga tgtgggcttg ggtctattag ggttcttagg attctagggt
     1441 ttgtaatcct atatatatcg tatgaataat aaagtaatct cgagggggtt tcattga
//
LOCUS       XM_071829829            3492 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin ligase PARAQUAT
            TOLERANCE 3-like (LOC139839696), mRNA.
ACCESSION   XM_071829829
VERSION     XM_071829829.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3492
                     /gene="LOC139839696"
                     /note="E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 14 Proteins"
                     /db_xref="GeneID:139839696"
     CDS             727..3342
                     /gene="LOC139839696"
                     /codon_start=1
                     /product="E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like"
                     /protein_id="XP_071685930.1"
                     /db_xref="GeneID:139839696"
                     /translation="MAVYYKFKSAKDYDSIAIDGHFITVACLKEKIYESKQLGRGTDY
                     DLVVTNAQTNEEYRDEDMLIPKNTSVLIRRIPGQPRKPIVATPNEQAEPKMANELETA
                     QQAKSNFSGAGLSTNYPDNSEYDEFGNDLYEIPEVVAAVSTIQPQDAPAPSNVDEDSK
                     IQALIDTPALDWQQQNFDVFGAGRGFGRGMGGRMGGRGFGRSSGGFERKTPPPGYICH
                     RCKTPGHFIQHCPTNGDPNFDVKRVRPPTGIPKSMLMATPDGSYALPSGAVAVLKPNE
                     AAFEKEIEGMPSTRTVGDLPPELHCPLCKEVMKDAVLTSKCCFKSFCDKCIRDHIINK
                     SVCVCGATNVLADDLLPNKTLRDTINRILESNNDSAENGGSAYHVQDMESARCGPPQP
                     KIPSPSRSAASKGEQPPLLNEETTKMQPGPTEHDVVQLAQPTASGKEKVQKAPDVSEA
                     TYDSRSMMEPASQGSARPVDDEVQQKQQVPAEPAKKKKKKKVNMPSAAEMQWRASQEF
                     APENYIMPPGHNNPYNNPYWNGMQPGMPPGMHPGMDPFMAHQYGGMPPYMGGGGGYGF
                     GGPMDVPFGGGMFPQDPFGAPGLMMPPFIPPQRDLAEFGMGMNGGGPPMSREAFEARR
                     AELKRKRDFEKRSGSGSGRELQKERDYNREDGPPMKSKTKPIPPYCSDGHRHRTERPS
                     PDHHRHYRDDGNDAPPHTSSKRKSSGDRDDYDDYDDERHHHHRHSQPHKSHRRSESST
                     GKPPQAPPVAESKAAAVAAAANTASDRNHKSSVFSRISFPDEEAAAAAASKKRKITSS
                     GSEAASGGGSTVVSRKSSTKTAPATSSIDYESSDDDRHFKRRPSRYESSPVRERERDR
                     DREKKHDREHYSKHR"
     misc_feature    733..1830
                     /gene="LOC139839696"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]; Region:
                     COG5222"
                     /db_xref="CDD:227547"
     misc_feature    1621..>2118
                     /gene="LOC139839696"
                     /note="DNA repair protein rad18; Region: rad18; TIGR00599"
                     /db_xref="CDD:273165"
     polyA_site      3492
                     /gene="LOC139839696"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aggcacggac gattttgggg tataacctta ttctaccaat ttagccctaa attctaatcg
       61 acgcgcataa cctatcaaat cctcgaatta catcaacgaa tcttcaattg atgaacttat
      121 aaagagcaat tacgctgtct accgctggta accgagactt gttaatcctt tggaggagtt
      181 ttggatcata catccaattc gtgacgattg aattaaaaag cccataaatt taattcagat
      241 ccgtaaattg atagcgaaga tacacatgtt tcggaagaat caagcaccgg aagagatcga
      301 cgccaaatcg aagaattagg gttttgttct tatcatcgga tacatacttc accttctgaa
      361 atctttcaat ttgcttattg atattgaaag ttagggtttg tatccgattt cacgaatcga
      421 aggaacaacg gaatttgttc gaagagttta cggattgaac gcgtgaagat gtggcaagga
      481 ttcgattgag gcggtttctt agtcggtttg atcttattga agagcggaaa aattaaaaaa
      541 atagagataa ttggttattg atttttgtac tgttatttta tgtttttgtt ttcggtgttc
      601 aattcaggcg tttgatatta ttgcttttat ttgaacgcct ttattgatta ttgatatact
      661 agtagtgaaa attgtgcttg ttcttgatat ttttgaggga aaagaaaaag aatttaatat
      721 ttaattatgg cagtatatta taagtttaaa agtgcaaaag attatgactc gattgcaatc
      781 gatgggcatt ttataacagt tgcctgtttg aaagaaaaaa tatatgaatc taaacagttg
      841 ggcaggggca ctgattatga tcttgtcgtc accaacgccc agactaatga agaataccgt
      901 gatgaagaca tgttgattcc aaaaaatacg tctgttttaa ttcgtcgaat tcctggacag
      961 cctcgcaagc ctatagttgc aacaccaaat gaacaagccg agcccaaaat ggctaatgag
     1021 ctggagactg cacaacaggc aaagagtaac ttttcaggag ctggcctctc taccaactat
     1081 cctgataatt cagagtatga tgaatttgga aatgatctgt atgaaattcc tgaagttgtg
     1141 gcagctgtgt ccaccattca acctcaggat gctcccgctc ctagtaatgt tgatgaagac
     1201 agcaaaattc aagctttaat tgatacacca gccttagact ggcagcaaca aaattttgat
     1261 gtctttggtg ctggtagagg ctttgggcgc ggaatgggtg gtagaatggg tgggcgtggt
     1321 tttggtcgaa gtagtggtgg atttgagcgt aaaacaccac ctccaggcta tatatgtcac
     1381 agatgcaaaa ccccaggtca ttttattcag cattgtccca ccaatggtga tccaaatttt
     1441 gatgtcaaaa gagttagacc gccaactggc atcccgaaat ctatgttaat ggctacacca
     1501 gatggatcat acgcattacc tagcggtgca gtggcagttt tgaaaccgaa tgaggctgct
     1561 tttgagaagg agattgaagg tatgccgtct actcgtactg ttggtgattt accaccagaa
     1621 cttcattgtc cgttgtgtaa agaagttatg aaagatgctg ttctcactag caagtgttgt
     1681 ttcaagagtt tttgtgataa atgcatacga gatcacataa tcaacaaatc agtttgtgtg
     1741 tgtggtgcaa caaatgtgct agcagatgat ctcttaccca ataagactct acgggataca
     1801 attaaccgaa tactggaatc aaataatgac agtgctgaaa atggtggcag tgcttatcat
     1861 gttcaagata tggagtctgc tagatgcggg ccaccacagc ctaagattcc atctccatca
     1921 cgatccgcag cctccaaagg ggaacagcct ccactactaa acgaggagac tacaaagatg
     1981 cagccgggtc ccaccgaaca tgatgtggtt cagttggctc agccgacagc ctcggggaaa
     2041 gaaaaagtcc aaaaagcccc tgatgtttct gaagctacat acgactcgag gagtatgatg
     2101 gaaccagcgt cacagggtag tgctcgaccc gttgatgatg aagtgcagca gaaacaacaa
     2161 gttcctgctg agccagcaaa gaagaagaaa aagaagaaag ttaacatgcc gagtgctgca
     2221 gagatgcagt ggagggcgtc gcaagagttt gcacctgaga attatataat gcctccaggt
     2281 cataataatc cttataataa tccgtattgg aatggcatgc agcctggtat gccacctggc
     2341 atgcatcctg gcatggatcc atttatggct caccaatatg gtgggatgcc gccatatatg
     2401 ggtggtggtg gtggttatgg atttggaggc ccaatggacg ttccttttgg tggaggcatg
     2461 tttccccaag atccttttgg tgctccgggc ctcatgatgc ctccttttat cccgcctcaa
     2521 agggatcttg cggagtttgg tatgggcatg aatggcggtg ggccccctat gagtcgagag
     2581 gcatttgaag cacgtagagc agaactgaag cggaagcgtg attttgagaa acgtagtgga
     2641 tcgggaagtg gccgggagtt acaaaaagaa cgggattaca accgtgagga tggtcctcca
     2701 atgaagtcga aaactaaacc aattccacca tactgcagcg atggtcaccg acacagaacc
     2761 gaaagaccgt cacctgacca ccaccgccat taccgtgacg atggcaacga cgctccacca
     2821 cacacatcct caaagagaaa atcttctggc gatcgtgacg attatgacga ctacgatgac
     2881 gagcgtcacc accaccaccg ccactcacag ccacacaaga gccaccgtcg ttcagaatca
     2941 tcaaccggaa agccgcccca agcaccgcca gtcgccgagt ctaaagccgc tgcagtagca
     3001 gcggcagcta ataccgccag tgatcggaat cacaagtcga gtgtcttctc tcgcatcagt
     3061 tttccagacg aagaagctgc cgctgctgca gcttcgaaga aacggaagat tacatcaagc
     3121 ggttcggaag cggcatctgg tggtggttct acggtggtgt ctaggaagag cagcaccaaa
     3181 actgcacctg ctactagtag catagattat gaatctagtg atgatgatag gcatttcaag
     3241 aggagacctt cgagatatga atcgtctcct gtaagggagc gggaacgaga tcgagaccgc
     3301 gagaagaaac atgatcggga acattacagc aagcatagat agccggaatc tggcaagctt
     3361 gtcatatgaa ttgttatttt ccctttttga gagtttaaag ttattatgtt tcttgttctc
     3421 tttttgtata tttggatgtg taacaccata acatgatttg ttggaaataa gtaaaatttg
     3481 gattttactt ca
//
LOCUS       XM_071829830            3047 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable LRR receptor-like
            serine/threonine-protein kinase At4g37250 (LOC139839697), mRNA.
ACCESSION   XM_071829830
VERSION     XM_071829830.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3047
                     /gene="LOC139839697"
                     /note="probable LRR receptor-like serine/threonine-protein
                     kinase At4g37250; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139839697"
     CDS             424..2808
                     /gene="LOC139839697"
                     /codon_start=1
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At4g37250"
                     /protein_id="XP_071685931.1"
                     /db_xref="GeneID:139839697"
                     /translation="MITFLFTFSLLISSIYSLNSDGILLLSFKYSILSDPLSVLDNWN
                     YDDPTPCSWKGVTCDPSSSVTTLILPNSQLLGSIPQDLGIIPNLHSLDLSNNSLNGSL
                     PPSIFNSSSLQSLSLSSNILSGQLPNSLSDLHSLKFLNLSDNEFAGKLPKSLATLNTL
                     TRLSLKNNFFSGSIPGGFDNIEFLDLSFNAFNETLPVDFGGEKLSYLNLSNNKISGSV
                     SPAFVAKINPNATIDLSFNNLTGEIPQSLLLSHPKTAFFAGNLDLCGKPLNKMCTIPS
                     SLSSPPNVTSNGSATAAIAVMPKNMDPPPSSSSTSSSTSSSTGHVDTNGGGLKVKPAK
                     IAAIVVGDLAGIALLAILFIYAYNLRKKKMYKDQKNDLVVFRNNKSNITKNITTTTKP
                     PQSTTCSCLNGVTGDESSETGTGSDTDQENNNHNQNNININININNDIKVESKGDEEK
                     QKCLVMVDGETELEIETLLKASAYVLGASGSSIVYKAVLGGGGGGGGTAFAVRRIGES
                     GVEKMRDFENTVRIIAKLRHPNLLRLRGFYWGEDEKLVIYDYVNNGSLAGTSAGYKKV
                     SSSPCQLPFEVRLKIAKGVAMGLAYIHEKKHVHGNIKPSNVLLTSEMDPIISDFGLEW
                     LISGKHAYKTKGSNRHFGSKRSISSREEIMINHGYHNHHHSASSSPYMAPATGLLGCT
                     SPYHAPESMKNLKPNPKWDVYSFGIVLLELISGKLFSERELGLWNAGSSSIDDENSIL
                     RLTDMSIRTDVDGRREATLTCFRLGFSCAALNPQKRPSMKEALQVLEKIASKSF"
     misc_feature    433..>1269
                     /gene="LOC139839697"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    613..684
                     /gene="LOC139839697"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    685..798
                     /gene="LOC139839697"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    829..900
                     /gene="LOC139839697"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    901..963
                     /gene="LOC139839697"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    964..1032
                     /gene="LOC139839697"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1033..1110
                     /gene="LOC139839697"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1849..2790
                     /gene="LOC139839697"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1849..1860,1867..1869,1873..1875,1924..1926,
                     1930..1932,2017..2019,2065..2076,2224..2226,2236..2241,
                     2245..2247,2275..2280)
                     /gene="LOC139839697"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     polyA_site      3047
                     /gene="LOC139839697"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgatagattt ctttaaatcc ctaatgataa tataaccgct ttcagaattg agcatgattt
       61 ataagacaag acaggtttaa agaaaaggca ttatctcctt tttaggaaaa agtgatgtta
      121 aaatttaaat taaaaaaatg tttaaacaaa tagtagcatg gattcccttg ttgaatgacc
      181 ctgaatacta aaactgtagt gattgaaata agtaagtata tttatttatt attcctaaat
      241 tccacatata tttctatctc tgcaacactg aaaccactct ttctttctga cctttttttg
      301 ttcaccaaaa caacaatgct catagttgtt taccttccat tccttttcat ctcctaataa
      361 taactccatt tctccattaa cattcctcac cactaaccaa ccaactaacc aatcatcatc
      421 atcatgatca ccttcttgtt cacattttct cttttaattt cttcaatcta ttcactcaac
      481 tctgatggaa tccttcttct ttcattcaaa tactccattc tctctgaccc actttctgtt
      541 cttgataact ggaactatga tgacccaact ccttgctcat ggaaaggtgt cacttgtgac
      601 ccatcatctt cagtcaccac cttaatcctt cctaattccc aacttcttgg ttccattcct
      661 caagatttgg gaatcattcc caatcttcat tcccttgatc tctctaataa ctccttaaat
      721 ggcagcttac caccctccat tttcaattct tcatctcttc agtccctttc tttatcctca
      781 aacatcttat ctggccaact ccctaattca ttatctgatt tgcactccct caagttcctt
      841 aatctatccg ataacgaatt tgccggcaaa ttaccaaaaa gtttagccac cttaaacacc
      901 ttaactagac tttctctaaa aaacaacttt ttttctggaa gtatacctgg tggatttgac
      961 aatattgagt ttctagattt gtcttttaac gcgttcaacg aaactttacc tgtcgatttc
     1021 ggtggcgaaa agttaagtta cttgaatcta tcaaataaca aaatttcagg ttctgtttca
     1081 ccagcattcg tcgcgaaaat aaacccaaac gccacaatcg acctctcgtt caacaacctc
     1141 actggcgaaa tcccacagtc gttattgtta tcgcatccga aaaccgcatt ctttgcaggg
     1201 aatttggatt tatgtggaaa accacttaat aaaatgtgca caatcccttc atcattatca
     1261 agtccaccaa atgttacttc aaatggttca gctactgctg caatagcagt catgcctaaa
     1321 aacatggacc cgcctccttc atcatcatcc acatcatcgt ccacgtcatc atccaccgga
     1381 catgtagata caaatggtgg tgggttgaaa gtcaagccag ctaaaatagc agccattgtg
     1441 gttggagact tagctggtat tgctcttctt gcaattctat ttatctacgc gtacaatttg
     1501 cgcaagaaaa aaatgtacaa ggatcaaaag aatgatctcg ttgtattcag aaacaacaaa
     1561 tcgaatatta cgaaaaacat cacgacgaca accaaaccgc cacaatctac aacatgttca
     1621 tgcttaaacg gtgtcactgg ggacgaatca tcagaaacgg ggacagggtc cgatactgat
     1681 caagagaaca ataatcataa tcagaataat attaatatta atattaatat taataatgat
     1741 ataaaggttg agtcaaaagg tgatgaagag aaacaaaagt gtttagtgat ggtagatggt
     1801 gagactgagt tggagattga gacattgttg aaagcttcag cttatgtgtt gggtgcaagc
     1861 gggtcgagta tagtgtacaa ggcggttttg ggcggtggtg gcggcggtgg tgggacggcg
     1921 tttgctgttc gaaggattgg agagagtggg gttgagaaaa tgcgcgattt tgagaatact
     1981 gtaaggatta ttgcgaagtt acgacacccg aatttgttga gattaagagg gttttattgg
     2041 ggtgaagatg aaaagcttgt tatttatgat tatgtcaaca atggaagctt agctggtact
     2101 agtgctggtt acaaaaaggt tagttcatct ccatgtcagt taccattcga ggttcgactc
     2161 aagatagcga aaggggttgc aatggggtta gcctatattc acgaaaagaa acatgtacat
     2221 ggcaacataa aaccgagcaa cgttctgtta acgtcagaaa tggacccgat cattagtgat
     2281 tttggattag aatggctcat atcaggtaaa cacgcgtata aaacaaaagg atcaaaccgc
     2341 cactttggta gtaaacgatc aatatcatca cgtgaagaaa ttatgattaa tcacggttat
     2401 cataatcatc atcattcagc gagtagtagc ccgtacatgg ctccagccac agggctactt
     2461 gggtgcacgt ctccttatca tgcacccgag tcaatgaaga accttaaacc aaacccaaag
     2521 tgggacgttt attcgtttgg tattgtgtta ctagaactaa tatcggggaa gttgttctcg
     2581 gaacgggagt taggattatg gaacgcaggt tcgtcaagta ttgacgatga gaactcgatc
     2641 ttaaggctaa cggatatgtc tattaggact gatgttgatg gtagacgtga agccacactc
     2701 acgtgtttta ggctcgggtt tagttgtgca gcattgaatc cacaaaagag gccttctatg
     2761 aaagaggcat tgcaagtact tgaaaagata gcatctaaat ctttttgatg atgaaatatg
     2821 cacacaaagg ttcaaaaggt aacaacttgg tgaaaaaaag gggttaaagt gcatagcttt
     2881 gaaacttttg acttgtaagt tatgtatcaa aatgaagatt ccagagacga ttgatgaatg
     2941 ttgataatgt gattcaaacg tgttgtatgt tattcatctt ttttctcttt tgattaataa
     3001 aagtagcatg cattccttaa gtcataagta agattttata tttggca
//
LOCUS       XM_071829831            1150 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIC 21,
            chloroplastic-like (LOC139839699), transcript variant X1, mRNA.
ACCESSION   XM_071829831
VERSION     XM_071829831.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1150
                     /gene="LOC139839699"
                     /note="protein TIC 21, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839699"
     CDS             31..882
                     /gene="LOC139839699"
                     /codon_start=1
                     /product="protein TIC 21, chloroplastic-like"
                     /protein_id="XP_071685932.1"
                     /db_xref="GeneID:139839699"
                     /translation="MQTFLLPAARSGNAPPSFTLTKPSLPTLRQTHSVLNSHSSSTNQ
                     SLSFTSTSLFSQQSNRHLILKNPNNKLAPAPISVAYNEYPEQAKLAQVAKRLDSTSRY
                     FKRLGSLGFWGQLVSTIVAAVILSFSVVITGKVTSPATFYATAGGIVAAFISVFMSFG
                     YIRLSDRLRKTVNNPEKAPPRSDVINSLKTGIVVNILGMGAAILGMQATVGLLVAKAL
                     TTSSSNSYYRGIAAGNSPILALDVFLVQASANTILSHFLGLVFSLELLRSVTVPPSDA
                     VPVARAA"
     misc_feature    307..837
                     /gene="LOC139839699"
                     /note="Protein of unknown function (DUF3611); Region:
                     DUF3611; pfam12263"
                     /db_xref="CDD:432436"
     polyA_site      1150
                     /gene="LOC139839699"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatccccctt caacactacc cacttccgaa atgcaaactt ttttgctgcc ggcagctcgt
       61 tccggcaatg caccgccgtc gttcactcta acaaagccct cactacccac actccggcaa
      121 acacactccg tccttaattc ccactcgtct tctactaatc aatctctttc ctttacatca
      181 acatctctat tttcgcaaca atcaaatcgc catctaatcc ttaaaaaccc taataataaa
      241 ctcgctccag ctcccatttc cgtcgcttac aatgaatacc ccgaacaagc taaacttgct
      301 caggttgcaa aaagattaga tagtacatca aggtatttca agagattagg tagcttaggg
      361 ttttggggac agcttgttag tacaattgta gctgccgtta tcctttcgtt ttcggttgtg
      421 atcactggaa aggtcacttc accagctacg ttctatgcta ctgctggtgg tattgttgct
      481 gctttcattt ccgttttcat gtcgtttggt tatattcgtc tttctgatag gcttcgtaaa
      541 actgtgaata accctgaaaa ggctccccct cgttctgatg ttataaacag tttgaaaact
      601 ggaatcgttg tgaacatttt gggtatgggt gctgccattc ttgggatgca agctactgtt
      661 ggactgctgg tggccaaggc cctcacaaca tcatcatcta attcatatta ccggggtatc
      721 gctgccggaa acagccctat tcttgcgttg gatgttttct tggtccaggc aagtgcaaat
      781 acgattctat cacatttctt gggacttgta ttctctctgg agctactaag atcggttaca
      841 gtaccacctt cagatgccgt tccggttgct cgggcagcat aatccttttc atttgcatac
      901 tcaacaaggt tttttaacga tgagcggatg aaaaggctat gcttgttgct tgatggtaaa
      961 taaatctttt gtttcttaaa gtctcacttg atagactttt gtagtgtgct tcaactaggg
     1021 tgctagtgtt ttcttcccat gagtcgctaa ttttttagca aaatttgacg tctttgatca
     1081 ttttgtggta atatttgttc actaaaaaac aatctcggct tatatgtgaa gtaaacgaaa
     1141 ccattctata
//
LOCUS       XR_011757032            3450 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIC 21,
            chloroplastic-like (LOC139839699), transcript variant X2, misc_RNA.
ACCESSION   XR_011757032
VERSION     XR_011757032.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3450
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3450
                     /gene="LOC139839699"
                     /note="protein TIC 21, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839699"
     misc_RNA        1..3450
                     /gene="LOC139839699"
                     /product="protein TIC 21, chloroplastic-like, transcript
                     variant X2"
                     /db_xref="GeneID:139839699"
ORIGIN      
        1 aatccccctt caacactacc cacttccgaa atgcaaactt ttttgctgcc ggcagctcgt
       61 tccggcaatg caccgccgtc gttcactcta acaaagccct cactacccac actccggcaa
      121 acacactccg tccttaattc ccactcgtct tctactaatc aatctctttc ctttacatca
      181 acatctctat tttcgcaaca atcaaatcgc catctaatcc ttaaaaaccc taataataaa
      241 ctcgctccag ctcccatttc cgtcgcttac aatgaatacc ccgaacaagc taaacttgct
      301 caggttgcaa aaagattaga tagtacatca aggtatttca agagattagg tagcttaggg
      361 ttttggggac agcttgttag tacaattgta gctgccgtta tcctttcgtt ttcggttgtg
      421 atcactggaa aggtcacttc accagctacg ttctatgcta ctgctggtgg tattgttgct
      481 gctttcattt ccgttttcat gtcgtttggt tatattcgtc tttctgatag gcttcgtaaa
      541 actgtgaata accctgaaaa ggctccccct cgttctgatg ttataaacag tttgaaaact
      601 ggaatcgttg tgaacatttt gggtatgggt gctgccattc ttgggatgca agctactgtt
      661 ggactgctgg tggccaaggc cctcacaaca tcatcatcta attcatatta ccggggtatc
      721 gctgccggaa acagccctat tcttgcgttg gatgttttct tggtccaggc aagtgcaaat
      781 acgattctat cacatttctt gggacttgta ttctctctgg agctactaag atcggttaca
      841 gtaccacctt cagatgccgt tccggttgct cgggcagcat aatccttttc atttgcatac
      901 tcaacaaggt tttttaacga tgagcggatg aaaaggctat gcttgttgct tgatgaaagt
      961 tttggaagag gtaatgaagg tcaccatcac aaaagtggaa gtggaagctt tttaggaatc
     1021 acgggatgat agaaaaagcc acataaatga ttcattgaag ctctattatg gagtaggatt
     1081 ttggtcactt ctacattaca tacccacttt gatggcaaca tttttggccc catcctacaa
     1141 gataaactct gtatatttgc atatagccaa ggttaaggtt atgttgccgg gttaatggct
     1201 gattagtcat tgcagtaggg tcctagctta tagtagtctt tatgttcaac tgtgatttgg
     1261 ttagttttta tagatcaaca tctacggatc atattaaatc taattatatg tttcgttcag
     1321 gataaatctc gcgagtacct tgacagtctt aataatgcta gaaggctcga agcactggtt
     1381 ttgtatcaat ccgaatccaa atttagatca aaatgagtgt gctcgtgtat atttagttac
     1441 aagctcaaac tctatttatt cattaagcat aaataccaaa tttcagctgc cttatatgaa
     1501 ctcgtggttt ataaaatttg tcgtagatga gttgaagatg ataaaataaa attatataca
     1561 cattttgctg gttaaaaaaa aaaacaaaca tatatatata gatacttacc acatcatgca
     1621 agtaactgaa tattgttaat tagtgtggag gctttctagt attctttata aaggttgttt
     1681 tattgacttt catacatata tgaaattttg aattaagtaa tagaccatga atcacgataa
     1741 gaaaagccgg aagtactatt tatttacatc ttttgatgct agtgtcacaa actttactat
     1801 aaagtaattg aaaagctata atttgttaaa ctgtaattgt ataccttact tatatatgtt
     1861 acgactttta tctgtaccat aaagtcaaga taaatataat ataaatggac acttttttag
     1921 gccactcggg gatggtaaat acttgtactc tatctatgcg gtttaatcag gttttactgt
     1981 gatttttttg aacattttcc ttgtcatttc aagataagtt gctagtgagg tttgaagata
     2041 aaatctattc tcaatatatc aaaacttcaa ccttagaata tcattgtatg ctatattgct
     2101 atagacctat agtacataca tggtgaagtt tgattttgta gcagttgaat catatgtatt
     2161 ctataatgaa tgatttttat ttcctattcg attgaaaaaa gtagttgata atcatctggt
     2221 taagatcgat ctaaaccaac tcattatgta tatgattcaa catgccaacg attagacaac
     2281 ttatccactt attagaacac ttgtctctga attgtgagag ccaattatgt agcatcttca
     2341 ccgagaattt tgtgtatttg tctacatcat tagtatgata ctatgatcct ttctagtaac
     2401 tacccagcct gtaataacga aacttgctat aaagttatct cctaaaaatc agaatgttga
     2461 cacatctagt ttctacaagc tgagaactta tttgttactc tctatgtttc atattgatag
     2521 ttcagtattt catttttagc cgtctcaaat taatagtcta ctttcatatt cataaatata
     2581 taagaataat aagacaaagt tcgcccctaa cttttacata taagacaaaa aaaaataggt
     2641 gatagtaagg aataaaattt taaattacat aaatagtaca gtgtaatgat aagatttctt
     2701 aaaatgtata tttttttgtt taaaactatt aatatgggat ggatggagta tagtctaaaa
     2761 tatcaacaag tcaatcgaaa gtattaacaa acgcatggac ttatttgtaa ataaacagtt
     2821 actattactt ttttttttct ccctctgttt ttgggtttta ggtatgtttg cagagcaggc
     2881 ggtggggttc caactcattg agtatgtctt gtagcaaaaa acacaaagat tccacgccta
     2941 tactaatact actattattt tcaaataatt ttcacacata ccccactatt ttctgtctga
     3001 atacaaaata ccttcattca tttgactata aaaacatggt catcatattc ataaactcct
     3061 atccagtttc tgtctgaata caaaatacct tgattgatta tttaaaaaaa aaatggtcat
     3121 catatttata aacttaaact atacagtata tttaaatgtt ccaatttatg taacattatc
     3181 ggtcaatttg aagttttttt cagacctaac taccaacata ttttggggtg gtcagggaga
     3241 gtttggtcac aaacggtcac gagatatgac caattaggtc gcatacatac atctgagtaa
     3301 aaatatcgtt acttttctag tagcctgaac atgaaaatct tatccgtttt atgttacggt
     3361 gacttgacat atttgatgaa gtcacttgaa tttttataaa tctatcgtaa atgtacatta
     3421 catttggctc cattaatcga gtcaacatca
//
LOCUS       XR_011757033            3085 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIC 21,
            chloroplastic-like (LOC139839699), transcript variant X3, misc_RNA.
ACCESSION   XR_011757033
VERSION     XR_011757033.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3085
                     /gene="LOC139839699"
                     /note="protein TIC 21, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839699"
     misc_RNA        1..3085
                     /gene="LOC139839699"
                     /product="protein TIC 21, chloroplastic-like, transcript
                     variant X3"
                     /db_xref="GeneID:139839699"
ORIGIN      
        1 aatccccctt caacactacc cacttccgaa atgcaaactt ttttgctgcc ggcagctcgt
       61 tccggcaatg caccgccgtc gttcactcta acaaagccct cactacccac actccggcaa
      121 acacactccg tccttaattc ccactcgtct tctactaatc aatctctttc ctttacatca
      181 acatctctat tttcgcaaca atcaaatcgc catctaatcc ttaaaaaccc taataataaa
      241 ctcgctccag ctcccatttc cgtcgcttac aatgaatacc ccgaacaagc taaacttgct
      301 caggttgcaa aaagattaga tagtacatca aggtatttca agagattagg tagcttaggg
      361 ttttggggac agcttgttag tacaattgta gctgccgtta tcctttcgtt ttcggttgtg
      421 atcactggaa aggtcacttc accagctacg ttctatgcta ctgctggtgg tattgttgct
      481 gctttcattt ccgttttcat gtcgtttggt tatattcgtc tttctgatag gcttcgtaaa
      541 actgtgaata accctgaaaa ggctccccct cgttctgatg ttataaacag tttgaaaact
      601 ggaatcgttg tgaacatttt gggtatgggt gctgccattc ttgggatgca agctactgtt
      661 ggactgctgg tggccaaggc cctcacaaca tcatcatcta attcatatta ccggggtatc
      721 gctgccggaa acagccctat tcttgcgttg gatgttttct tggtccaggc aagtgcaaat
      781 acgattctat cacatttctt gggacttgta ttctctctgg agctactaag atcggttaca
      841 gtaccacctt cagatgccgt tccggttgct cgggcagcat aatccttttc atttgcatac
      901 tcaacaaggt tttttaacga tgagcggatg aaaaggctat gcttgttgct tgatggataa
      961 atctcgcgag taccttgaca gtcttaataa tgctagaagg ctcgaagcac tggttttgta
     1021 tcaatccgaa tccaaattta gatcaaaatg agtgtgctcg tgtatattta gttacaagct
     1081 caaactctat ttattcatta agcataaata ccaaatttca gctgccttat atgaactcgt
     1141 ggtttataaa atttgtcgta gatgagttga agatgataaa ataaaattat atacacattt
     1201 tgctggttaa aaaaaaaaac aaacatatat atatagatac ttaccacatc atgcaagtaa
     1261 ctgaatattg ttaattagtg tggaggcttt ctagtattct ttataaaggt tgttttattg
     1321 actttcatac atatatgaaa ttttgaatta agtaatagac catgaatcac gataagaaaa
     1381 gccggaagta ctatttattt acatcttttg atgctagtgt cacaaacttt actataaagt
     1441 aattgaaaag ctataatttg ttaaactgta attgtatacc ttacttatat atgttacgac
     1501 ttttatctgt accataaagt caagataaat ataatataaa tggacacttt tttaggccac
     1561 tcggggatgg taaatacttg tactctatct atgcggttta atcaggtttt actgtgattt
     1621 ttttgaacat tttccttgtc atttcaagat aagttgctag tgaggtttga agataaaatc
     1681 tattctcaat atatcaaaac ttcaacctta gaatatcatt gtatgctata ttgctataga
     1741 cctatagtac atacatggtg aagtttgatt ttgtagcagt tgaatcatat gtattctata
     1801 atgaatgatt tttatttcct attcgattga aaaaagtagt tgataatcat ctggttaaga
     1861 tcgatctaaa ccaactcatt atgtatatga ttcaacatgc caacgattag acaacttatc
     1921 cacttattag aacacttgtc tctgaattgt gagagccaat tatgtagcat cttcaccgag
     1981 aattttgtgt atttgtctac atcattagta tgatactatg atcctttcta gtaactaccc
     2041 agcctgtaat aacgaaactt gctataaagt tatctcctaa aaatcagaat gttgacacat
     2101 ctagtttcta caagctgaga acttatttgt tactctctat gtttcatatt gatagttcag
     2161 tatttcattt ttagccgtct caaattaata gtctactttc atattcataa atatataaga
     2221 ataataagac aaagttcgcc cctaactttt acatataaga caaaaaaaaa taggtgatag
     2281 taaggaataa aattttaaat tacataaata gtacagtgta atgataagat ttcttaaaat
     2341 gtatattttt ttgtttaaaa ctattaatat gggatggatg gagtatagtc taaaatatca
     2401 acaagtcaat cgaaagtatt aacaaacgca tggacttatt tgtaaataaa cagttactat
     2461 tacttttttt tttctccctc tgtttttggg ttttaggtat gtttgcagag caggcggtgg
     2521 ggttccaact cattgagtat gtcttgtagc aaaaaacaca aagattccac gcctatacta
     2581 atactactat tattttcaaa taattttcac acatacccca ctattttctg tctgaataca
     2641 aaataccttc attcatttga ctataaaaac atggtcatca tattcataaa ctcctatcca
     2701 gtttctgtct gaatacaaaa taccttgatt gattatttaa aaaaaaaatg gtcatcatat
     2761 ttataaactt aaactataca gtatatttaa atgttccaat ttatgtaaca ttatcggtca
     2821 atttgaagtt tttttcagac ctaactacca acatattttg gggtggtcag ggagagtttg
     2881 gtcacaaacg gtcacgagat atgaccaatt aggtcgcata catacatctg agtaaaaata
     2941 tcgttacttt tctagtagcc tgaacatgaa aatcttatcc gttttatgtt acggtgactt
     3001 gacatatttg atgaagtcac ttgaattttt ataaatctat cgtaaatgta cattacattt
     3061 ggctccatta atcgagtcaa catca
//
LOCUS       XM_071829832            1846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X1, mRNA.
ACCESSION   XM_071829832
VERSION     XM_071829832.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1846
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     CDS             1365..1625
                     /gene="LOC139839700"
                     /codon_start=1
                     /product="beta-galactosidase-like"
                     /protein_id="XP_071685933.1"
                     /db_xref="GeneID:139839700"
                     /translation="MVYSGYSDGKNTVYNTKRVWSQCLLMQMKSDGRGFAWQSFIDQT
                     ETYGDNEYTTRGLLEQLNVTRVARNATHNNKSTGCVDASVQC"
     misc_feature    <1386..>1565
                     /gene="LOC139839700"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
     polyA_site      1846
                     /gene="LOC139839700"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgaggtac aattgttgtt gtacattgta gcaagtgcat gctttgtgtg ctacattttt
      481 tattattgat ttttatttat aattgtcccg cctgtctctt aactcatgga gaagcttcta
      541 tcagaagtct ctgctctgtg ataggttgct ggtgtggctg tttcctaaat ttgacctcaa
      601 tggtttgact ttcttagcag aagtgataca ctactatcag tttggcagtt catttttatt
      661 ttacaagtct ttagctggaa aacatgaaaa gaagtaaaga acaataggtg aaagtaataa
      721 agaaggaagg atctagaacg tctcattgca tagacaccag ttatcttata cagaaggaat
      781 tcgtttcgac aaaacacatc agtacaagta cagttgcaac acattatctg cttagggtca
      841 gtgaagcttg gcaaatgtta ccattctaat tagcttccaa ggctcttaaa ggaggatcga
      901 gcaaacataa ctgcaatttc agtcaatcca tgggaaattc cctccaatat ctaccctaaa
      961 aagtgatatt tggtgatgaa acgaaattgg ttgcacattc ggaatgccaa aaaaaatatg
     1021 ttgataactt cctatttagt actaaaacga gaagccaaaa tgggggccac tgaaagattt
     1081 gcataaagcc ataaaactcg gtgagcctgc tttagtaaat agtgatccca ctattatcaa
     1141 tagcaaagac accatcaaaa ggttgtattt ttatgttctt tttgttcgtt tatgatttgc
     1201 ttaattcgac aacataatag ttggagctca gtttttatat atgatgtctt tataggcgta
     1261 tgtttataat tataaggctg gagattgtgc tactttattt tcaaataata tttgagccga
     1321 ttacattaca ataaatctcc taaaccagaa gtacaataat ctccatggtc tacagcggat
     1381 actctgacgg caagaatacc gtttataata caaaaagggt atggtcacaa tgtttgctga
     1441 tgcaaatgaa atctgatggg cgaggatttg cttggcagtc atttattgat caaacggaaa
     1501 cgtatggtga taatgagtat accacacgtg ggttattgga gcaactcaat gtcactagag
     1561 ttgcaaggaa tgcgacacac aacaataaga gcactgggtg tgttgacgcg tcagttcagt
     1621 gttagttcac tgtcttgctg atgactgtac gctgactgga ctgacattgt aaactgatat
     1681 tgctgaaaaa acaggggaat taagaagata gtcagttcag tgtcttggaa agagaaaata
     1741 ttttttgttt tattaaattt attcatctta aaatctttaa aataatttgt ataaaaatac
     1801 ggagtatcac ttggacagtt ggacatccat ttcttaattg atatca
//
LOCUS       XM_071829834            2379 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X2, mRNA.
ACCESSION   XM_071829834
VERSION     XM_071829834.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2379
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     CDS             1898..2158
                     /gene="LOC139839700"
                     /codon_start=1
                     /product="beta-galactosidase-like"
                     /protein_id="XP_071685935.1"
                     /db_xref="GeneID:139839700"
                     /translation="MVYSGYSDGKNTVYNTKRVWSQCLLMQMKSDGRGFAWQSFIDQT
                     ETYGDNEYTTRGLLEQLNVTRVARNATHNNKSTGCVDASVQC"
     misc_feature    <1919..>2098
                     /gene="LOC139839700"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
     polyA_site      2379
                     /gene="LOC139839700"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgaggtac aattgttgtt gtacattgta gcaagtgcat gctttgtgtg ctacattttt
      481 tattattgat ttttatttat aattgtcccg cctgtctctt aactcatgga gaagcttcta
      541 tcagaagtct ctgctctggt atattttttc ttttttctac tgactcttcg ctattgataa
      601 acaaattgaa aatcgttgca ttgtacagac ttcgagatgt tttgtatact agatgtcaaa
      661 acatgactaa tttttgtcat acattgatgg tcatacggta aaatgaccat attttgaaat
      721 atttgaatgc aacagtcaag tgctcacggt gggtatgttt gtaggtttga ttttattcag
      781 tcaatatagt catgagcgag atgtctttaa gtggcttggg cggtaagttt ggttaggtta
      841 atcgttggag agttcatatt gagttggatg gtatatgggc taagaattac ctttgtcagc
      901 agggttgcaa tttgattctg ataatcagaa atggttaaga atttatttta gagttaaaag
      961 tgcaaaacac aagtccactg tcaaaaggca cataactttt aatgataccc ttataaatag
     1021 ataaatacat ggcaataacc agatgtcggg taaaaaagaa gcagtattta cattactgtg
     1081 tgcccatttt gctgtttgga gttgttgaat tcttcatatc cgtatacagt aacctaaata
     1141 aatacattca tagccactaa tgaaataatg atctataaat tcaagtgata ggttgctggt
     1201 gtggctgttt cctaaatttg acctcaatgg tttgactttc ttagcagaag tgatacacta
     1261 ctatcagttt ggcagttcat ttttatttta caagtcttta gctggaaaac atgaaaagaa
     1321 gtaaagaaca ataggtgaaa gtaataaaga aggaaggatc tagaacgtct cattgcatag
     1381 acaccagtta tcttatacag aaggaattcg tttcgacaaa acacatcagt acaagtacag
     1441 ttgcaacaca ttatctgctt agggtcagtg aagcttggca aatgttacca ttctaattag
     1501 cttccaaggc tcttaaagga ggatcgagca aacataactg caatttcagt caatccatgg
     1561 gaaattccct ccaatatcta ccctaaaaag tgatatttgg tgatgaaacg aaattggttg
     1621 cacattcgga atgccaaaaa aaatatgttg ataacttcct atttagtact aaaacgagaa
     1681 gccaaaatgg gggccactga aagatttgca taaagccata aaactcggtg agcctgcttt
     1741 agtaaatagt gatcccacta ttatcaatag caaagacacc atcaaaaggc gtatgtttat
     1801 aattataagg ctggagattg tgctacttta ttttcaaata atatttgagc cgattacatt
     1861 acaataaatc tcctaaacca gaagtacaat aatctccatg gtctacagcg gatactctga
     1921 cggcaagaat accgtttata atacaaaaag ggtatggtca caatgtttgc tgatgcaaat
     1981 gaaatctgat gggcgaggat ttgcttggca gtcatttatt gatcaaacgg aaacgtatgg
     2041 tgataatgag tataccacac gtgggttatt ggagcaactc aatgtcacta gagttgcaag
     2101 gaatgcgaca cacaacaata agagcactgg gtgtgttgac gcgtcagttc agtgttagtt
     2161 cactgtcttg ctgatgactg tacgctgact ggactgacat tgtaaactga tattgctgaa
     2221 aaaacagggg aattaagaag atagtcagtt cagtgtcttg gaaagagaaa atattttttg
     2281 ttttattaaa tttattcatc ttaaaatctt taaaataatt tgtataaaaa tacggagtat
     2341 cacttggaca gttggacatc catttcttaa ttgatatca
//
LOCUS       XM_071829835            1792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X3, mRNA.
ACCESSION   XM_071829835
VERSION     XM_071829835.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1792
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     CDS             1311..1571
                     /gene="LOC139839700"
                     /codon_start=1
                     /product="beta-galactosidase-like"
                     /protein_id="XP_071685936.1"
                     /db_xref="GeneID:139839700"
                     /translation="MVYSGYSDGKNTVYNTKRVWSQCLLMQMKSDGRGFAWQSFIDQT
                     ETYGDNEYTTRGLLEQLNVTRVARNATHNNKSTGCVDASVQC"
     misc_feature    <1332..>1511
                     /gene="LOC139839700"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
     polyA_site      1792
                     /gene="LOC139839700"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgaggtac aattgttgtt gtacattgta gcaagtgcat gctttgtgtg ctacattttt
      481 tattattgat ttttatttat aattgtcccg cctgtctctt aactcatgga gaagcttcta
      541 tcagaagtct ctgctctgtg ataggttgct ggtgtggctg tttcctaaat ttgacctcaa
      601 tggtttgact ttcttagcag ctggaaaaca tgaaaagaag taaagaacaa taggtgaaag
      661 taataaagaa ggaaggatct agaacgtctc attgcataga caccagttat cttatacaga
      721 aggaattcgt ttcgacaaaa cacatcagta caagtacagt tgcaacacat tatctgctta
      781 gggtcagtga agcttggcaa atgttaccat tctaattagc ttccaaggct cttaaaggag
      841 gatcgagcaa acataactgc aatttcagtc aatccatggg aaattccctc caatatctac
      901 cctaaaaagt gatatttggt gatgaaacga aattggttgc acattcggaa tgccaaaaaa
      961 aatatgttga taacttccta tttagtacta aaacgagaag ccaaaatggg ggccactgaa
     1021 agatttgcat aaagccataa aactcggtga gcctgcttta gtaaatagtg atcccactat
     1081 tatcaatagc aaagacacca tcaaaaggtt gtatttttat gttctttttg ttcgtttatg
     1141 atttgcttaa ttcgacaaca taatagttgg agctcagttt ttatatatga tgtctttata
     1201 ggcgtatgtt tataattata aggctggaga ttgtgctact ttattttcaa ataatatttg
     1261 agccgattac attacaataa atctcctaaa ccagaagtac aataatctcc atggtctaca
     1321 gcggatactc tgacggcaag aataccgttt ataatacaaa aagggtatgg tcacaatgtt
     1381 tgctgatgca aatgaaatct gatgggcgag gatttgcttg gcagtcattt attgatcaaa
     1441 cggaaacgta tggtgataat gagtatacca cacgtgggtt attggagcaa ctcaatgtca
     1501 ctagagttgc aaggaatgcg acacacaaca ataagagcac tgggtgtgtt gacgcgtcag
     1561 ttcagtgtta gttcactgtc ttgctgatga ctgtacgctg actggactga cattgtaaac
     1621 tgatattgct gaaaaaacag gggaattaag aagatagtca gttcagtgtc ttggaaagag
     1681 aaaatatttt ttgttttatt aaatttattc atcttaaaat ctttaaaata atttgtataa
     1741 aaatacggag tatcacttgg acagttggac atccatttct taattgatat ca
//
LOCUS       XM_071829836            1786 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X4, mRNA.
ACCESSION   XM_071829836
VERSION     XM_071829836.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1786
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     CDS             1305..1565
                     /gene="LOC139839700"
                     /codon_start=1
                     /product="beta-galactosidase-like"
                     /protein_id="XP_071685937.1"
                     /db_xref="GeneID:139839700"
                     /translation="MVYSGYSDGKNTVYNTKRVWSQCLLMQMKSDGRGFAWQSFIDQT
                     ETYGDNEYTTRGLLEQLNVTRVARNATHNNKSTGCVDASVQC"
     misc_feature    <1326..>1505
                     /gene="LOC139839700"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
     polyA_site      1786
                     /gene="LOC139839700"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgaggtac aattgttgtt gtacattgta gcaagtgcat gctttgtgtg ctacattttt
      481 tattattgat ttttatttat aattgtcccg cctgtctctt aactcatgga gaagcttcta
      541 tcagaagtct ctgctctggt tgctggtgtg gctgtttcct aaatttgacc tcaatggttt
      601 gactttctta gcagctggaa aacatgaaaa gaagtaaaga acaataggtg aaagtaataa
      661 agaaggaagg atctagaacg tctcattgca tagacaccag ttatcttata cagaaggaat
      721 tcgtttcgac aaaacacatc agtacaagta cagttgcaac acattatctg cttagggtca
      781 gtgaagcttg gcaaatgtta ccattctaat tagcttccaa ggctcttaaa ggaggatcga
      841 gcaaacataa ctgcaatttc agtcaatcca tgggaaattc cctccaatat ctaccctaaa
      901 aagtgatatt tggtgatgaa acgaaattgg ttgcacattc ggaatgccaa aaaaaatatg
      961 ttgataactt cctatttagt actaaaacga gaagccaaaa tgggggccac tgaaagattt
     1021 gcataaagcc ataaaactcg gtgagcctgc tttagtaaat agtgatccca ctattatcaa
     1081 tagcaaagac accatcaaaa ggttgtattt ttatgttctt tttgttcgtt tatgatttgc
     1141 ttaattcgac aacataatag ttggagctca gtttttatat atgatgtctt tataggcgta
     1201 tgtttataat tataaggctg gagattgtgc tactttattt tcaaataata tttgagccga
     1261 ttacattaca ataaatctcc taaaccagaa gtacaataat ctccatggtc tacagcggat
     1321 actctgacgg caagaatacc gtttataata caaaaagggt atggtcacaa tgtttgctga
     1381 tgcaaatgaa atctgatggg cgaggatttg cttggcagtc atttattgat caaacggaaa
     1441 cgtatggtga taatgagtat accacacgtg ggttattgga gcaactcaat gtcactagag
     1501 ttgcaaggaa tgcgacacac aacaataaga gcactgggtg tgttgacgcg tcagttcagt
     1561 gttagttcac tgtcttgctg atgactgtac gctgactgga ctgacattgt aaactgatat
     1621 tgctgaaaaa acaggggaat taagaagata gtcagttcag tgtcttggaa agagaaaata
     1681 ttttttgttt tattaaattt attcatctta aaatctttaa aataatttgt ataaaaatac
     1741 ggagtatcac ttggacagtt ggacatccat ttcttaattg atatca
//
LOCUS       XM_071829837            1714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X5, mRNA.
ACCESSION   XM_071829837
VERSION     XM_071829837.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1714
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     CDS             1233..1493
                     /gene="LOC139839700"
                     /codon_start=1
                     /product="beta-galactosidase-like"
                     /protein_id="XP_071685938.1"
                     /db_xref="GeneID:139839700"
                     /translation="MVYSGYSDGKNTVYNTKRVWSQCLLMQMKSDGRGFAWQSFIDQT
                     ETYGDNEYTTRGLLEQLNVTRVARNATHNNKSTGCVDASVQC"
     misc_feature    <1254..>1433
                     /gene="LOC139839700"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
     polyA_site      1714
                     /gene="LOC139839700"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgagtgat aggttgctgg tgtggctgtt tcctaaattt gacctcaatg gtttgacttt
      481 cttagcagaa gtgatacact actatcagtt tggcagttca tttttatttt acaagtcttt
      541 agctggaaaa catgaaaaga agtaaagaac aataggtgaa agtaataaag aaggaaggat
      601 ctagaacgtc tcattgcata gacaccagtt atcttataca gaaggaattc gtttcgacaa
      661 aacacatcag tacaagtaca gttgcaacac attatctgct tagggtcagt gaagcttggc
      721 aaatgttacc attctaatta gcttccaagg ctcttaaagg aggatcgagc aaacataact
      781 gcaatttcag tcaatccatg ggaaattccc tccaatatct accctaaaaa gtgatatttg
      841 gtgatgaaac gaaattggtt gcacattcgg aatgccaaaa aaaatatgtt gataacttcc
      901 tatttagtac taaaacgaga agccaaaatg ggggccactg aaagatttgc ataaagccat
      961 aaaactcggt gagcctgctt tagtaaatag tgatcccact attatcaata gcaaagacac
     1021 catcaaaagg ttgtattttt atgttctttt tgttcgttta tgatttgctt aattcgacaa
     1081 cataatagtt ggagctcagt ttttatatat gatgtcttta taggcgtatg tttataatta
     1141 taaggctgga gattgtgcta ctttattttc aaataatatt tgagccgatt acattacaat
     1201 aaatctccta aaccagaagt acaataatct ccatggtcta cagcggatac tctgacggca
     1261 agaataccgt ttataataca aaaagggtat ggtcacaatg tttgctgatg caaatgaaat
     1321 ctgatgggcg aggatttgct tggcagtcat ttattgatca aacggaaacg tatggtgata
     1381 atgagtatac cacacgtggg ttattggagc aactcaatgt cactagagtt gcaaggaatg
     1441 cgacacacaa caataagagc actgggtgtg ttgacgcgtc agttcagtgt tagttcactg
     1501 tcttgctgat gactgtacgc tgactggact gacattgtaa actgatattg ctgaaaaaac
     1561 aggggaatta agaagatagt cagttcagtg tcttggaaag agaaaatatt ttttgtttta
     1621 ttaaatttat tcatcttaaa atctttaaaa taatttgtat aaaaatacgg agtatcactt
     1681 ggacagttgg acatccattt cttaattgat atca
//
LOCUS       XM_071829838            1652 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X6, mRNA.
ACCESSION   XM_071829838
VERSION     XM_071829838.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1652
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     CDS             1171..1431
                     /gene="LOC139839700"
                     /codon_start=1
                     /product="beta-galactosidase-like"
                     /protein_id="XP_071685939.1"
                     /db_xref="GeneID:139839700"
                     /translation="MVYSGYSDGKNTVYNTKRVWSQCLLMQMKSDGRGFAWQSFIDQT
                     ETYGDNEYTTRGLLEQLNVTRVARNATHNNKSTGCVDASVQC"
     misc_feature    <1192..>1371
                     /gene="LOC139839700"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
     polyA_site      1652
                     /gene="LOC139839700"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgagaagt gatacactac tatcagtttg gcagttcatt tttattttac aagtctttag
      481 ctggaaaaca tgaaaagaag taaagaacaa taggtgaaag taataaagaa ggaaggatct
      541 agaacgtctc attgcataga caccagttat cttatacaga aggaattcgt ttcgacaaaa
      601 cacatcagta caagtacagt tgcaacacat tatctgctta gggtcagtga agcttggcaa
      661 atgttaccat tctaattagc ttccaaggct cttaaaggag gatcgagcaa acataactgc
      721 aatttcagtc aatccatggg aaattccctc caatatctac cctaaaaagt gatatttggt
      781 gatgaaacga aattggttgc acattcggaa tgccaaaaaa aatatgttga taacttccta
      841 tttagtacta aaacgagaag ccaaaatggg ggccactgaa agatttgcat aaagccataa
      901 aactcggtga gcctgcttta gtaaatagtg atcccactat tatcaatagc aaagacacca
      961 tcaaaaggtt gtatttttat gttctttttg ttcgtttatg atttgcttaa ttcgacaaca
     1021 taatagttgg agctcagttt ttatatatga tgtctttata ggcgtatgtt tataattata
     1081 aggctggaga ttgtgctact ttattttcaa ataatatttg agccgattac attacaataa
     1141 atctcctaaa ccagaagtac aataatctcc atggtctaca gcggatactc tgacggcaag
     1201 aataccgttt ataatacaaa aagggtatgg tcacaatgtt tgctgatgca aatgaaatct
     1261 gatgggcgag gatttgcttg gcagtcattt attgatcaaa cggaaacgta tggtgataat
     1321 gagtatacca cacgtgggtt attggagcaa ctcaatgtca ctagagttgc aaggaatgcg
     1381 acacacaaca ataagagcac tgggtgtgtt gacgcgtcag ttcagtgtta gttcactgtc
     1441 ttgctgatga ctgtacgctg actggactga cattgtaaac tgatattgct gaaaaaacag
     1501 gggaattaag aagatagtca gttcagtgtc ttggaaagag aaaatatttt ttgttttatt
     1561 aaatttattc atcttaaaat ctttaaaata atttgtataa aaatacggag tatcacttgg
     1621 acagttggac atccatttct taattgatat ca
//
LOCUS       XM_071829839            1708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X7, mRNA.
ACCESSION   XM_071829839
VERSION     XM_071829839.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1708
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     CDS             1227..1487
                     /gene="LOC139839700"
                     /codon_start=1
                     /product="beta-galactosidase-like"
                     /protein_id="XP_071685940.1"
                     /db_xref="GeneID:139839700"
                     /translation="MVYSGYSDGKNTVYNTKRVWSQCLLMQMKSDGRGFAWQSFIDQT
                     ETYGDNEYTTRGLLEQLNVTRVARNATHNNKSTGCVDASVQC"
     misc_feature    <1248..>1427
                     /gene="LOC139839700"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
     polyA_site      1708
                     /gene="LOC139839700"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgaggttg ctggtgtggc tgtttcctaa atttgacctc aatggtttga ctttcttagc
      481 agaagtgata cactactatc agtttggcag ttcattttta ttttacaagt ctttagctgg
      541 aaaacatgaa aagaagtaaa gaacaatagg tgaaagtaat aaagaaggaa ggatctagaa
      601 cgtctcattg catagacacc agttatctta tacagaagga attcgtttcg acaaaacaca
      661 tcagtacaag tacagttgca acacattatc tgcttagggt cagtgaagct tggcaaatgt
      721 taccattcta attagcttcc aaggctctta aaggaggatc gagcaaacat aactgcaatt
      781 tcagtcaatc catgggaaat tccctccaat atctacccta aaaagtgata tttggtgatg
      841 aaacgaaatt ggttgcacat tcggaatgcc aaaaaaaata tgttgataac ttcctattta
      901 gtactaaaac gagaagccaa aatgggggcc actgaaagat ttgcataaag ccataaaact
      961 cggtgagcct gctttagtaa atagtgatcc cactattatc aatagcaaag acaccatcaa
     1021 aaggttgtat ttttatgttc tttttgttcg tttatgattt gcttaattcg acaacataat
     1081 agttggagct cagtttttat atatgatgtc tttataggcg tatgtttata attataaggc
     1141 tggagattgt gctactttat tttcaaataa tatttgagcc gattacatta caataaatct
     1201 cctaaaccag aagtacaata atctccatgg tctacagcgg atactctgac ggcaagaata
     1261 ccgtttataa tacaaaaagg gtatggtcac aatgtttgct gatgcaaatg aaatctgatg
     1321 ggcgaggatt tgcttggcag tcatttattg atcaaacgga aacgtatggt gataatgagt
     1381 ataccacacg tgggttattg gagcaactca atgtcactag agttgcaagg aatgcgacac
     1441 acaacaataa gagcactggg tgtgttgacg cgtcagttca gtgttagttc actgtcttgc
     1501 tgatgactgt acgctgactg gactgacatt gtaaactgat attgctgaaa aaacagggga
     1561 attaagaaga tagtcagttc agtgtcttgg aaagagaaaa tattttttgt tttattaaat
     1621 ttattcatct taaaatcttt aaaataattt gtataaaaat acggagtatc acttggacag
     1681 ttggacatcc atttcttaat tgatatca
//
LOCUS       XR_011757034            2547 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X8, misc_RNA.
ACCESSION   XR_011757034
VERSION     XR_011757034.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2547
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     misc_RNA        1..2547
                     /gene="LOC139839700"
                     /product="beta-galactosidase-like, transcript variant X8"
                     /db_xref="GeneID:139839700"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgaggtac aattgttgtt gtacattgta gcaagtgcat gctttgtgtg ctacattttt
      481 tattattgat ttttatttat aattgtcccg cctgtctctt aactcatgga gaagcttcta
      541 tcagaagtct ctgctctggt atattttttc ttttttctac tgactcttcg ctattgataa
      601 acaaattgaa aatcgttgca ttgtacagac ttcgagatgt tttgtatact agatgtcaaa
      661 acatgactaa tttttgtcat acattgatgg tcatacggta aaatgaccat attttgaaat
      721 atttgaatgc aacagtcaag tgctcacggt gggtatgttt gtaggtttga ttttattcag
      781 tcaatatagt catgagcgag atgtctttaa gtggcttggg cggtaagttt ggttaggtta
      841 atcgttggag agttcatatt gagttggatg gtatatgggc taagaattac ctttgtcagc
      901 agggttgcaa tttgattctg ataatcagaa atggttaaga atttatttta gagttaaaag
      961 tgcaaaacac aagtccactg tcaaaaggca cataactttt aatgataccc ttataaatag
     1021 ataaatacat ggcaataacc agatgtcggg taaaaaagaa gcagtattta cattactgtg
     1081 tgcccatttt gctgtttgga gttgttgaat tcttcatatc cgtatacagt aacctaaata
     1141 aatacattca tagccactaa tgaaataatg atctataaat tcaagtgata ggttgctggt
     1201 gtggctgttt cctaaatttg acctcaatgg tttgactttc ttagcagaag tgatacacta
     1261 ctatcagttt ggcagttcat ttttatttta caagtcttta gctggaaaac atgaaaagaa
     1321 gtaaagaaca ataggtgaaa gtaataaaga aggaaggatc tagaacgtct cattgcatag
     1381 acaccagtta tcttatacag aaggaattcg tttcgacaaa acacatcagt acaagtacag
     1441 ttgcaacaca ttatctgctt agggtcagtg aagcttggca aatgttacca ttctaattag
     1501 cttccaaggc tcttaaagga ggatcgagca aacataactg caatttcagt caatccatgg
     1561 gaaattccct ccaatatcta ccctaaaaag tgatatttgg tgatgaaacg aaattggttg
     1621 cacattcgga atgccaaaaa aaatatgttg ataacttcct atttagtact aaaacgagaa
     1681 gccaaaatgg gggccactga aagatttgca taaagccata aaactcggtg agcctgcttt
     1741 agtaaatagt gatcccacta ttatcaatag caaagacacc atcaaaaggt tgtattttta
     1801 tgttcttttt gttcgtttat gatttgctta attcgacaac ataatagttg gagctcagtt
     1861 tttatatatg atgtctttat aggcgtatgt ttataattat aaggctggag attgtgctac
     1921 tttattttca aataatattt gagccgatta cattacaata aatctcctaa accagaagta
     1981 caataatctc catggtctac agcggatact ctgacggcaa gaataccgtt tataatacaa
     2041 aaagggtgaa atcgtgcaac aatacaaaac tctcatagta cacatgaatt gattaagtta
     2101 gttgatattt atttgtgatt gtgattatag gtatggtcac aatgtttgct gatgcaaatg
     2161 aaatctgatg ggcgaggatt tgcttggcag tcatttattg atcaaacgga aacgtatggt
     2221 gataatgagt ataccacacg tgggttattg gagcaactca atgtcactag aggacaatga
     2281 tcatggtaat tatgggcacc cttcaaaagc tcaagatgtc aaattcgtgc aatatacact
     2341 tccatttaag tagtgattcg tgtgtgcagt gggccgtgga tcttctatac gtatattgtc
     2401 ttaaatatca actcaatata tgtttctttt ttatgttatg gtctaattct atagatagct
     2461 ggtaaataca taagtatcat attattattt cttacttgaa accttatttt attcaatagc
     2521 actgatactg gtattcttta ttgtttt
//
LOCUS       XR_011757035            2455 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X9, misc_RNA.
ACCESSION   XR_011757035
VERSION     XR_011757035.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2455
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     misc_RNA        1..2455
                     /gene="LOC139839700"
                     /product="beta-galactosidase-like, transcript variant X9"
                     /db_xref="GeneID:139839700"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgaggtac aattgttgtt gtacattgta gcaagtgcat gctttgtgtg ctacattttt
      481 tattattgat ttttatttat aattgtcccg cctgtctctt aactcatgga gaagcttcta
      541 tcagaagtct ctgctctggt atattttttc ttttttctac tgactcttcg ctattgataa
      601 acaaattgaa aatcgttgca ttgtacagac ttcgagatgt tttgtatact agatgtcaaa
      661 acatgactaa tttttgtcat acattgatgg tcatacggta aaatgaccat attttgaaat
      721 atttgaatgc aacagtcaag tgctcacggt gggtatgttt gtaggtttga ttttattcag
      781 tcaatatagt catgagcgag atgtctttaa gtggcttggg cggtaagttt ggttaggtta
      841 atcgttggag agttcatatt gagttggatg gtatatgggc taagaattac ctttgtcagc
      901 agggttgcaa tttgattctg ataatcagaa atggttaaga atttatttta gagttaaaag
      961 tgcaaaacac aagtccactg tcaaaaggca cataactttt aatgataccc ttataaatag
     1021 ataaatacat ggcaataacc agatgtcggg taaaaaagaa gcagtattta cattactgtg
     1081 tgcccatttt gctgtttgga gttgttgaat tcttcatatc cgtatacagt aacctaaata
     1141 aatacattca tagccactaa tgaaataatg atctataaat tcaagtgata ggttgctggt
     1201 gtggctgttt cctaaatttg acctcaatgg tttgactttc ttagcagaag tgatacacta
     1261 ctatcagttt ggcagttcat ttttatttta caagtcttta gctggaaaac atgaaaagaa
     1321 gtaaagaaca ataggtgaaa gtaataaaga aggaaggatc tagaacgtct cattgcatag
     1381 acaccagtta tcttatacag aaggaattcg tttcgacaaa acacatcagt acaagtacag
     1441 ttgcaacaca ttatctgctt agggtcagtg aagcttggca aatgttacca ttctaattag
     1501 cttccaaggc tcttaaagga ggatcgagca aacataactg caatttcagt caatccatgg
     1561 gaaattccct ccaatatcta ccctaaaaag tgatatttgg tgatgaaacg aaattggttg
     1621 cacattcgga atgccaaaaa aaatatgttg ataacttcct atttagtact aaaacgagaa
     1681 gccaaaatgg gggccactga aagatttgca taaagccata aaactcggtg agcctgcttt
     1741 agtaaatagt gatcccacta ttatcaatag caaagacacc atcaaaaggt atggtcacaa
     1801 tgtttgctga tgcaaatgaa atctgatggg cgaggatttg cttggcagtc atttattgat
     1861 caaacggaaa cgtatggtga taatgagtat accacacgtg ggttattgga gcaactcaat
     1921 gtcactagag gttcgtccga ttatttgtgg tacatgacat agtaagtgca acgggtatgt
     1981 tgtcctcatg tggtgtttta cgcaagatat taaatataga agtgacactt tttacttatt
     2041 tcgttataca ttggttgctc gggtcttatt catctcaagt gagtcaaata aaaaggggtt
     2101 tttttttttt tttttaacta attaggacat ataaaagttt aattcttaag tcaacttact
     2161 gataattatc acactagcag gacaatgatc atggtaatta tgggcaccct tcaaaagctc
     2221 aagatgtcaa attcgtgcaa tatacacttc catttaagta gtgattcgtg tgtgcagtgg
     2281 gccgtggatc ttctatacgt atattgtctt aaatatcaac tcaatatatg tttctttttt
     2341 atgttatggt ctaattctat agatagctgg taaatacata agtatcatat tattatttct
     2401 tacttgaaac cttattttat tcaatagcac tgatactggt attctttatt gtttt
//
LOCUS       XR_011757036            2394 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839700), transcript variant X10, misc_RNA.
ACCESSION   XR_011757036
VERSION     XR_011757036.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2394
                     /gene="LOC139839700"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839700"
     misc_RNA        1..2394
                     /gene="LOC139839700"
                     /product="beta-galactosidase-like, transcript variant X10"
                     /db_xref="GeneID:139839700"
ORIGIN      
        1 tcttatggga attaggggtt tcataattaa ttaatctaac aacattatat ggctatcaaa
       61 ttgttccgaa atcctctaaa atctcaaata agtaatcttt ttggagaaga taccaaaatc
      121 aaagaatcaa ttggagtcat tctagggatt ttttctaggg tttcatatga agatcgaata
      181 cgctatcttg ctatctgacg agtgatttaa ctgttgattt taaagagtaa gatttcgcgt
      241 tatcatggaa ggagaggaga ttattcaaac gattttaaga atcaaatcat catatgatat
      301 tttggagatc gttgaggatt atgcaatata aacgaaccgt aaattctaat gaatcagggc
      361 atagtgtagt tgtcatggca tcaaccactg gacagtgcac gaagactcaa tgttaatata
      421 gctgaggtac aattgttgtt gtacattgta gcaagtgcat gctttgtgtg ctacattttt
      481 tattattgat ttttatttat aattgtcccg cctgtctctt aactcatgga gaagcttcta
      541 tcagaagtct ctgctctggt atattttttc ttttttctac tgactcttcg ctattgataa
      601 acaaattgaa aatcgttgca ttgtacagac ttcgagatgt tttgtatact agatgtcaaa
      661 acatgactaa tttttgtcat acattgatgg tcatacggta aaatgaccat attttgaaat
      721 atttgaatgc aacagtcaag tgctcacggt gggtatgttt gtaggtttga ttttattcag
      781 tcaatatagt catgagcgag atgtctttaa gtggcttggg cggtaagttt ggttaggtta
      841 atcgttggag agttcatatt gagttggatg gtatatgggc taagaattac ctttgtcagc
      901 agggttgcaa tttgattctg ataatcagaa atggttaaga atttatttta gagttaaaag
      961 tgcaaaacac aagtccactg tcaaaaggca cataactttt aatgataccc ttataaatag
     1021 ataaatacat ggcaataacc agatgtcggg taaaaaagaa gcagtattta cattactgtg
     1081 tgcccatttt gctgtttgga gttgttgaat tcttcatatc cgtatacagt aacctaaata
     1141 aatacattca tagccactaa tgaaataatg atctataaat tcaagtgata ggttgctggt
     1201 gtggctgttt cctaaatttg acctcaatgg tttgactttc ttagcagaag tgatacacta
     1261 ctatcagttt ggcagttcat ttttatttta caagtcttta gctggaaaac atgaaaagaa
     1321 gtaaagaaca ataggtgaaa gtaataaaga aggaaggatc tagaacgtct cattgcatag
     1381 acaccagtta tcttatacag aaggaattcg tttcgacaaa acacatcagt acaagtacag
     1441 ttgcaacaca ttatctgctt agggtcagtg aagcttggca aatgttacca ttctaattag
     1501 cttccaaggc tcttaaagga ggatcgagca aacataactg caatttcagt caatccatgg
     1561 gaaattccct ccaatatcta ccctaaaaag tgatatttgg tgatgaaacg aaattggttg
     1621 cacattcgga atgccaaaaa aaatatgttg ataacttcct atttagtact aaaacgagaa
     1681 gccaaaatgg gggccactga aagatttgca taaagccata aaactcggta tggtcacaat
     1741 gtttgctgat gcaaatgaaa tctgatgggc gaggatttgc ttggcagtca tttattgatc
     1801 aaacggaaac gtatggtgat aatgagtata ccacacgtgg gttattggag caactcaatg
     1861 tcactagagg ttcgtccgat tatttgtggt acatgacata gtaagtgcaa cgggtatgtt
     1921 gtcctcatgt ggtgttttac gcaagatatt aaatatagaa gtgacacttt ttacttattt
     1981 cgttatacat tggttgctcg ggtcttattc atctcaagtg agtcaaataa aaaggggttt
     2041 tttttttttt ttttaactaa ttaggacata taaaagttta attcttaagt caacttactg
     2101 ataattatca cactagcagg acaatgatca tggtaattat gggcaccctt caaaagctca
     2161 agatgtcaaa ttcgtgcaat atacacttcc atttaagtag tgattcgtgt gtgcagtggg
     2221 ccgtggatct tctatacgta tattgtctta aatatcaact caatatatgt ttctttttta
     2281 tgttatggtc taattctata gatagctggt aaatacataa gtatcatatt attatttctt
     2341 acttgaaacc ttattttatt caatagcact gatactggta ttctttattg tttt
//
LOCUS       XM_071829840            3012 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            HOS1-like (LOC139839701), mRNA.
ACCESSION   XM_071829840
VERSION     XM_071829840.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3012
                     /gene="LOC139839701"
                     /note="E3 ubiquitin-protein ligase HOS1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139839701"
     CDS             55..2775
                     /gene="LOC139839701"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase HOS1-like"
                     /protein_id="XP_071685941.1"
                     /db_xref="GeneID:139839701"
                     /translation="MDEGTTIHLDSDIRNAAAARPTTSNLSLQPNYSCRKVQEALEHL
                     ASIDLIELCNEAKVEHCRATRDLRSCGRCVQSVLNSCGHASLCEECSQRCDACPICRI
                     PVPKTGNRISLRLFYECIEAGLISKRYDDRFQEKDGEKQLTADVERLYSFFDVALENN
                     LLSLICHYITDVCMDESAVSSDPVVALLLDEVVVKDWCKRTFKNIVAELQPIYTLNNE
                     EIKERSSVLHKFTVRLSSISTVLEELESFFKDSISAQLHDICHLQESILKTKQHTEMM
                     IWYTRHQFLEGLYRHDSISSWRSDIRERKSMAIKRAWPSSTTSSADNAMLFIDDALSN
                     LDSQNEYAADREYDMEIASLHKDGGLSFSRVRLEGMVGSYPFESLRSAIDILFLCGSS
                     DLVVAKHAILIYYLFDRLWKIPDEKWRFCVDDFSATFNIARHSILESFTFYLLDDPSD
                     EALKEACYLLPEISGPNTHPKVAQVLLERENPYTALMVLRWSGSDNGTELVSLNEAVT
                     AVRVRVECGLLIEAFMYQRAVCTKAKKKKARHEMHDDDDDDWLEVLVTEICLLCIRRN
                     LVDRIIGLPWDADEEKHLHKCLLDCALEEPFSNTGSLLVVFYLQRYRYVEAYQVDQKL
                     QSIEKDFVSMNSVDEGTVTRMNSTQRWRAGIVDKSIQLLPEVEQQKVKSGQITETAPS
                     ENYNNTSEKHSFPEAQGLSHVNSSLLFRMGDEARSPKSNISEYGTPLISLMNPLNDTD
                     KGMGMYKSISKNFNFDDISSTPLKENRGSSRIRKNNYFQHDQNKSIDQLSSTSPYYGN
                     FASNIEDSPSSIGGLFGSSRFDGTLKASGKSTRASRLGRDLKEASADFMDMSWSNKDE
                     RLPVQTNMNSGPRWRSDDTGDYEDQQSPDRLIERNTPSRGFRRISRHTRR"
     misc_feature    <142..354
                     /gene="LOC139839701"
                     /note="TAZ zinc finger; Region: zf-TAZ; pfam02135"
                     /db_xref="CDD:460457"
     misc_feature    256..357
                     /gene="LOC139839701"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(262..264,271..273,295..297,301..303,313..315,
                     322..324,343..345,352..354)
                     /gene="LOC139839701"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438111"
     misc_feature    1030..1827
                     /gene="LOC139839701"
                     /note="Nuclear pore complex assembly; Region: ELYS;
                     pfam13934"
                     /db_xref="CDD:464050"
ORIGIN      
        1 ctctttcttc aaaaccccaa aaatcagagc tgctctgagc tccaaaacta aaaaatggac
       61 gaaggaacca ccatacattt ggattccgat atccgtaacg ccgccgcagc aagacctacc
      121 actagtaatc tctcacttca acctaactac agctgtcgca aagttcagga agcactagaa
      181 cacttggcat ctatagatct gatagaattg tgtaatgaag caaaagttga gcattgtagg
      241 gctacaaggg acttaagaag ttgtggacga tgtgttcaaa gcgtgttgaa ttcgtgcggc
      301 catgcttctt tatgtgaaga gtgtagtcag cgttgtgatg cttgcccgat atgccgaatt
      361 cctgttccaa aaactgggaa tagaatatct cttcgcttat tttacgagtg tattgaggct
      421 ggtctcatat ctaagagata tgatgacagg tttcaagaaa aagatgggga gaaacaacta
      481 acagctgatg ttgaaagact atattcgttt tttgatgttg ccttggagaa caatttgtta
      541 tccctgatct gccactatat aacagatgtt tgtatggatg aaagtgctgt ttctagtgac
      601 ccagttgttg ctttgttgct ggatgaagtg gttgttaaag actggtgcaa gaggacattt
      661 aaaaatattg ttgctgaact tcagcctatc tatactctta ataatgagga gattaaagaa
      721 aggtcaagtg tgcttcataa gtttacagtg aggctaagct ccatatcaac tgtcctagag
      781 gaattagaat ctttttttaa ggattccatt tctgcacagc ttcatgatat atgtcaccta
      841 caggaaagca tactgaagac aaagcagcat acagagatga tgatttggta tacaaggcat
      901 caatttcttg aaggtttata tcggcatgat agtatctcct catggcgttc tgatatccgt
      961 gagagaaaat ctatggcaat caaacgtgcg tggccgtcct caactacctc aagtgcagat
     1021 aacgcgatgt tgttcattga tgatgcttta tcgaatcttg attcacaaaa tgagtatgca
     1081 gctgataggg aatatgatat ggagattgca tctttgcata aagatggagg attatcattt
     1141 tctcgagtca gactagaggg gatggtcgga agctatcctt ttgaaagctt gcggtctgct
     1201 attgacattc tctttctatg tggaagttca gatctggttg tagcaaaaca tgcaattctg
     1261 atatattatc tgttcgatcg actttggaaa attcctgacg agaagtggag attctgtgtt
     1321 gatgactttt ctgctacatt caatatagcg agacattcaa tattggaatc atttacattt
     1381 tatcttcttg atgaccctag tgatgaggcc ctgaaggaag cttgttatct tctcccagag
     1441 atctcgggtc ccaatacaca tccaaaggtg gcacaagttc tgttagaaag agaaaatcct
     1501 tacacagctt taatggtttt aaggtggtca gggagtgata atggaactga gctggtctca
     1561 cttaatgagg ctgtaactgc tgttcgagtg agagttgaat gtgggcttct tattgaagcg
     1621 tttatgtatc aacgagcagt ttgcacaaaa gctaagaaaa agaaagcaag acatgaaatg
     1681 catgatgatg atgatgatga ttggttggag gttcttgtaa cagaaatttg tcttctttgt
     1741 atacggagga atttggtcga ccgaattatt gggttaccgt gggatgcgga tgaggaaaaa
     1801 catctacata agtgtctttt ggattgtgct ttggaagaac ctttttcaaa cacaggaagt
     1861 cttcttgttg tgttctattt acagaggtat cgatacgtgg aagcatatca agttgatcag
     1921 aagctccaaa gtattgagaa ggactttgtt tccatgaatt ctgttgatga aggtacagta
     1981 acaagaatga attctacaca acgttggaga gcaggaatcg ttgacaaaag tatacaacta
     2041 ctccctgaag ttgaacaaca aaaggtgaaa agtggtcaaa ttactgaaac agccccttca
     2101 gagaattaca acaatacttc agaaaaacat agttttccag aagcacaagg cctttctcat
     2161 gttaactctt ctcttctttt tcgaatgggt gatgaagccc gttcaccaaa atcaaatatt
     2221 agtgaatatg gtactccttt aatttcacta atgaatcccc ttaatgatac tgataaaggg
     2281 atgggcatgt acaaatccat cagtaaaaac ttcaactttg atgatatatc tagtacaccg
     2341 ttaaaagaaa acagaggttc ttcaaggatc aggaagaaca attatttcca acatgaccag
     2401 aataagtcaa tcgatcagct ttcgagtact agtccatatt atggaaattt tgcatctaat
     2461 attgaagatt caccgagtag tattggtggc ttatttgggt catcccgttt cgatgggacc
     2521 ttgaaagctt ctggtaaatc tacacgagct agcagacttg gtagagattt aaaggaggct
     2581 tcagctgatt ttatggacat gtcttggagc aacaaagatg agaggcttcc tgtgcagaca
     2641 aatatgaaca gtggaccgag atggagatca gatgatacgg gtgattacga agatcaacag
     2701 agccccgata gacttattga acgcaacact ccctcaagag gattcagaag aatcagcagg
     2761 cacacccgaa gataactcct tataagattt gcaaacttaa cagtatcttg tatgcatgcc
     2821 ctcaatgatt ttgcgctgat taaaacaaac agttcaccat atcacacatt tggatttctc
     2881 gctacaagcg ttgcttgttc catgaaaaat gccaggtctt agttagcctt tttcttagca
     2941 gtcttctgtt ttatgatttc tcgactagta taaggtacaa attgagttat tatttaatca
     3001 tattataatg tt
//
LOCUS       XM_071829841            1315 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides homeobox-leucine zipper
            protein HAT4-like (LOC139839702), mRNA.
ACCESSION   XM_071829841
VERSION     XM_071829841.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1315
                     /gene="LOC139839702"
                     /note="homeobox-leucine zipper protein HAT4-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 37 Proteins"
                     /db_xref="GeneID:139839702"
     CDS             102..1013
                     /gene="LOC139839702"
                     /codon_start=1
                     /product="homeobox-leucine zipper protein HAT4-like"
                     /protein_id="XP_071685942.1"
                     /db_xref="GeneID:139839702"
                     /translation="MVEKEDLGLSLSLNFPAAGNTNSSSLQLNLMPATFNHHRATPNW
                     TDSCPSSSDRNNAEAFKVETRSFLKGIDVNRIPPTAAEAEEEAGVSSPNSTISSISGK
                     RSERDLPVNENDGERASSRGISDDEDGENCRKKLRLSKDQSAVLEESFKEHNTLNPKQ
                     KQALAKRLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKELQE
                     LRALKMSPQFYMQMAPPTTLTMCPSCERVAVPPGSPAMDKSIDHQHKRAHMTGVNPHL
                     NRTPFNPWGVLANQVVHQQMSALRPSS"
     misc_feature    120..422
                     /gene="LOC139839702"
                     /note="HD-ZIP protein N terminus; Region: HD-ZIP_N;
                     pfam04618"
                     /db_xref="CDD:461370"
     misc_feature    order(498..509,513..515,564..566,582..584,621..623,
                     627..632,639..644,648..656,660..665)
                     /gene="LOC139839702"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    498..662
                     /gene="LOC139839702"
                     /note="Homeodomain; Region: HOX; smart00389"
                     /db_xref="CDD:197696"
     misc_feature    order(501..503,510..512,630..632,639..644,651..653)
                     /gene="LOC139839702"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    666..797
                     /gene="LOC139839702"
                     /note="homeobox associated leucin zipper; Region: HALZ;
                     smart00340"
                     /db_xref="CDD:128634"
     polyA_site      1315
                     /gene="LOC139839702"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acacctttct ctttacacat ttatcctcta tctttctgat tgcaattcca aacacacact
       61 aattattatt ttttgcttca gttacatact gttattaaat tatggttgaa aaggaagatt
      121 taggtttaag cctgagctta aactttccgg cagccggaaa cacaaattcg tcgtctcttc
      181 agctcaatct catgccggcg acgttcaatc atcatcgtgc aacgcctaat tggaccgatt
      241 catgtccatc ttcatcagat cggaacaacg cggaggcgtt taaagtcgaa acgaggtcgt
      301 ttttgaaagg aatcgatgtg aacagaatac cgccgacggc agcagaggcg gaggaagaag
      361 ccggcgtatc atcgccgaac agcacgatct ctagtattag tggaaagaga agcgaaagag
      421 atctgccggt gaatgaaaac gacggcgaga gagcttcatc tcgaggcatt agtgatgatg
      481 aggacggaga aaattgccgg aaaaaactcc ggttgtctaa agatcagtcg gctgtactcg
      541 aagaaagctt taaagaacac aacactctta atcctaagca aaagcaggct cttgccaaaa
      601 gactaggatt aagagctcgt caggtggaag tttggtttca aaaccgaagg gcaaggacaa
      661 aattaaagca aacggaagtg gattgtgagt ttttgaagag atgttgcgag aatttaactg
      721 aggaaaatag gaggttacaa aaggaattac aagaattaag agctttaaaa atgtcaccac
      781 aattttatat gcaaatggcg cccccgacaa cgctcactat gtgcccctcg tgtgagcgtg
      841 tcgcggtccc tcctggttca ccagcaatgg ataagtcaat tgatcatcaa cataagcggg
      901 cccacatgac gggtgtgaac ccgcacctta accgaacacc gtttaacccg tggggggtac
      961 ttgctaatca agtcgttcat caacaaatga gtgcccttcg ccctagctcg tgatagtcga
     1021 gaagagggtg ctttagtcat ttagtttttg tgaacgagtc taagatatga tatgaggttt
     1081 tgttgggtta ggatctagag atttggtccc atttgaccat ttaatatttg ggtttagttt
     1141 ttgtaatttt gatgtttagt tttttaatgt ttaaaaagtc ttccttccca aaatatcgaa
     1201 aggagaaaaa aaaaaaaaaa caactcattg tttgaagagg aaggaagaga cgtggtacta
     1261 ggtttgtaaa ttcccaaaac taattaatta atcgattata attatgtttt atcaa
//
LOCUS       XM_071829842            1124 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein Dr1 homolog
            (LOC139839704), mRNA.
ACCESSION   XM_071829842
VERSION     XM_071829842.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1124
                     /gene="LOC139839704"
                     /note="protein Dr1 homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139839704"
     CDS             335..808
                     /gene="LOC139839704"
                     /codon_start=1
                     /product="protein Dr1 homolog"
                     /protein_id="XP_071685943.1"
                     /db_xref="GeneID:139839704"
                     /translation="MDPIDIVGKTKEDASLPKATMTKIIKEMLPPDVRVARDTQDLLI
                     ECCVEFINLISSESNEVCGRDDKKTIAPEHVLKALEVLGFSEYIEDVYAAYEQHKLET
                     MDTVRSGKCSNAAEMTEEQALAEQQRMFAEARARMNGVATTAKPPEVEPSLEANS"
     misc_feature    365..751
                     /gene="LOC139839704"
                     /note="histone-fold domain found in protein Dr1 and
                     similar proteins; Region: HFD_Dr1; cd22905"
                     /db_xref="CDD:467030"
     misc_feature    order(368..370,374..385,392..394,404..409,413..421,
                     434..442,449..451,458..463,470..475,479..490,497..502,
                     509..511,539..550,557..559,593..595,602..604,614..616,
                     626..628)
                     /gene="LOC139839704"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467030"
     misc_feature    order(377..379,383..391,533..541,629..631,647..652)
                     /gene="LOC139839704"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467030"
     misc_feature    order(689..691,698..703,707..712,719..724,731..736,
                     743..745)
                     /gene="LOC139839704"
                     /note="TBP binding site [polypeptide binding]; other site"
                     /db_xref="CDD:467030"
     polyA_site      1124
                     /gene="LOC139839704"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataaaaaccc ttgctcatgg atctcatcgc caaccactcc cgacttaacc tctatccgcg
       61 tcatatccac gcgcccccaa cctcacggta ctcacgtggt ccacacatta ttctatatcc
      121 cacgcgcgtt acagcgcgtg aataatccat tacctggagg agttttgatt tttgcgctgg
      181 tcgcctctcc cccacccctc tatatcgaac aaccatcatg ctccatcgtt tcaacctccg
      241 atcgtttatt tccggcttga tttcgattga tttggttcct tctgtgatac gtcttcgtcc
      301 tgttgttact cgattttgat ttctccggtg aacaatggat cctatagata ttgttggcaa
      361 gacgaaagag gatgcttctt taccaaaagc tacgatgact aagataatta aggaaatgtt
      421 gcctccagat gtacgtgttg caagagatac tcaagattta ttaattgagt gttgtgttga
      481 gttcattaat cttatttcat ccgagtcaaa cgaggtttgt gggcgagacg ataaaaaaac
      541 aattgcacca gagcatgtac tcaaggcatt agaggtttta ggttttagcg aatacataga
      601 agatgtttat gctgcatacg aacaacacaa acttgaaaca atggacactg tgagaagtgg
      661 caagtgctca aatgcagcag agatgacgga agaacaagca ttagcagagc agcagaggat
      721 gtttgcggaa gcacgagcta gaatgaatgg ggttgcaacc acagccaagc caccagaagt
      781 agaacctagt ttggaagcca actcctagtt aaatcttaaa caggccattt tagcatattt
      841 tcctatcatg tacaaagtcc gccgcctgag ttagtttctc tgtttgaatg ttagcattat
      901 ccgcacctcc taatttgtct atatgtttgc tgtaattagt gagattgtta gctggatagt
      961 ttgtcgtgtt gcagcagagc agaatatggt tatatttctt gatttctaga aatgtgacag
     1021 ggaaatgtaa tgtaatgaaa tcgaatggag gatacttgta tttcgactca tgaaaacaaa
     1081 ttagaatgat gtcaattaca attaattcaa cattaaatat aaaa
//
LOCUS       XM_071829843            1137 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ras-related protein
            RABD2c-like (LOC139839705), mRNA.
ACCESSION   XM_071829843
VERSION     XM_071829843.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1137
                     /gene="LOC139839705"
                     /note="ras-related protein RABD2c-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 42 Proteins"
                     /db_xref="GeneID:139839705"
     CDS             180..791
                     /gene="LOC139839705"
                     /codon_start=1
                     /product="ras-related protein RABD2c-like"
                     /protein_id="XP_071685944.1"
                     /db_xref="GeneID:139839705"
                     /translation="MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVD
                     FKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW
                     LSEIDRYANENVNKLLVGNKCDLTSQKVVSYETGKAFADEIGIPFLETSAKSSTNVEE
                     AFMAMTAEIKNRMASQPAMNNARPPTVQIRGQPVNQKSGCCSS"
     misc_feature    198..695
                     /gene="LOC139839705"
                     /note="Rab GTPase family 1 includes the yeast homolog
                     Ypt1; Region: Rab1_Ypt1; cd01869"
                     /db_xref="CDD:206661"
     misc_feature    198..209
                     /gene="LOC139839705"
                     /note="Rab subfamily motif 1 (RabSF1); other site"
                     /db_xref="CDD:206661"
     misc_feature    222..245
                     /gene="LOC139839705"
                     /note="G1 box; other site"
                     /db_xref="CDD:206661"
     misc_feature    order(225..227,231..248,276..278,540..545,549..551,
                     630..638)
                     /gene="LOC139839705"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206661"
     misc_feature    order(246..281,288..296)
                     /gene="LOC139839705"
                     /note="Rab subfamily motif 2 (RabSF2); other site"
                     /db_xref="CDD:206661"
     misc_feature    order(276..278,291..317)
                     /gene="LOC139839705"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206661"
     misc_feature    order(291..293,303..326,345..347,351..353)
                     /gene="LOC139839705"
                     /note="putative GEF interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206661"
     misc_feature    297..299
                     /gene="LOC139839705"
                     /note="G2 box; other site"
                     /db_xref="CDD:206661"
     misc_feature    order(300..302,306..314,357..359,363..365,384..389,
                     396..398,408..410,414..425,684..686)
                     /gene="LOC139839705"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206661"
     misc_feature    order(300..305,309..311,363..368,387..389,393..395,
                     399..407,414..416)
                     /gene="LOC139839705"
                     /note="GDI interaction site [active]"
                     /db_xref="CDD:206661"
     misc_feature    300..314
                     /gene="LOC139839705"
                     /note="Rab family motif 1 (RabF1); other site"
                     /db_xref="CDD:206661"
     misc_feature    351..365
                     /gene="LOC139839705"
                     /note="Rab family motif 2 (RabF2); other site"
                     /db_xref="CDD:206661"
     misc_feature    366..377
                     /gene="LOC139839705"
                     /note="G3 box; other site"
                     /db_xref="CDD:206661"
     misc_feature    order(375..377,381..413)
                     /gene="LOC139839705"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206661"
     misc_feature    384..401
                     /gene="LOC139839705"
                     /note="Rab family motif 3 (RabF3); other site"
                     /db_xref="CDD:206661"
     misc_feature    408..422
                     /gene="LOC139839705"
                     /note="Rab family motif 4 (RabF4); other site"
                     /db_xref="CDD:206661"
     misc_feature    435..452
                     /gene="LOC139839705"
                     /note="Rab family motif 5 (RabF5); other site"
                     /db_xref="CDD:206661"
     misc_feature    513..533
                     /gene="LOC139839705"
                     /note="Rab subfamily motif 3 (RabSF3); other site"
                     /db_xref="CDD:206661"
     misc_feature    540..551
                     /gene="LOC139839705"
                     /note="G4 box; other site"
                     /db_xref="CDD:206661"
     misc_feature    630..638
                     /gene="LOC139839705"
                     /note="G5 box; other site"
                     /db_xref="CDD:206661"
     misc_feature    678..695
                     /gene="LOC139839705"
                     /note="Rab subfamily motif 4 (RabSF4); other site"
                     /db_xref="CDD:206661"
ORIGIN      
        1 ccaccttacc tacattctta agtcgcccaa attattcacc catctttcat aaccaaaaaa
       61 tcagtttttt ctaacatttt tctccggcga actttccgat ttctcgccgg ccgacgcaac
      121 aattactaaa aaacctccac gtatcttaga tttgatcgat cttaactcta tacacggaaa
      181 tgaatcccga atatgactat ctgtttaagc tattgctcat tggagattcg ggagttggaa
      241 aatcatgtct gctattgcgt tttgctgatg attcatattt agaaagttac atcagcacca
      301 ttggcgtgga cttcaaaatc cgcactgtgg aacaggatgg caaaacaatt aagcttcaaa
      361 tttgggatac tgctgggcaa gaacgtttca ggacaatcac cagcagctac tatcgtggag
      421 ctcatggcat tattgttgtt tatgatgtga cagatcaaga aagtttcaac aatgtgaagc
      481 aatggttgag tgagattgat cgttatgcca atgagaatgt aaacaagctt cttgttggaa
      541 acaaatgtga cctgacttcc cagaaagtcg tgtcctatga aacggggaag gcttttgctg
      601 atgagatcgg gattccgttc ctagaaacaa gtgccaagag ttccaccaat gttgaagagg
      661 cttttatggc tatgactgct gaaattaaaa acaggatggc tagccagccg gcaatgaaca
      721 atgctagacc accaacggtt caaatccgag gacaaccagt gaaccagaag tcagggtgct
      781 gctcatcttg atttggaaaa gcattttggt ggtcaatgtt cctgcaatat gcatgcttat
      841 tacatacata catacaaaac tctgatgccc tacttgtttg attgccaaat gtgtcttctc
      901 cctcatccct ttgttgaaag ttccattctt tctgatgtaa aactgattta aggaaccttt
      961 tgttcaaagt aggataagat tgttgaatgg ctattatgtt atactctttt gcaatttgca
     1021 tccttgtgtg agttgtcatt tggaaaatgt ttaagatacc tctcttttat atcaacaata
     1081 tttaagtgtg tttatggaga atacaagtta acctgaactg cttttcgctt atgtttt
//
LOCUS       XM_071829844            1254 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TRI1-like
            (LOC139839706), mRNA.
ACCESSION   XM_071829844
VERSION     XM_071829844.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1254
                     /gene="LOC139839706"
                     /note="protein TRI1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839706"
     CDS             692..1051
                     /gene="LOC139839706"
                     /codon_start=1
                     /product="protein TRI1-like"
                     /protein_id="XP_071685945.1"
                     /db_xref="GeneID:139839706"
                     /translation="MQRKREEVLANHVHFLPNMRARNPELARTEVVKRIWAYIKEKHL
                     QDPTYKRKILCYEMLRKNFRVKTIDMFQMSKALTKRIWLIKEEFDEPEQSAKSKGFRI
                     CFCTSNIRRAGPFLWSV"
     misc_feature    761..934
                     /gene="LOC139839706"
                     /note="SWIB/MDM2 domain found in SWIB/MDM2 homologous
                     proteins; Region: SWIB-MDM2_like; cd10567"
                     /db_xref="CDD:349489"
     misc_feature    order(776..778,785..790,794..799,806..811,824..826,
                     839..844,848..850,908..913)
                     /gene="LOC139839706"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:349489"
ORIGIN      
        1 cattatttat aaaccaaaca atactgacag cactgataga ttctttccag ggttcaacaa
       61 tgatatgggg ttctggatgg ccagattttt cgggcttggt catgggacat cgtctcttcg
      121 agatagcatc ttatcgacct gacaggtaat tataaatcat gataatttta catgatttta
      181 gtaatggctg ttacttatat ctatatatag tatgagatat aattattata aaggactttc
      241 taccaaagga acgtaaaaaa tgtccgatta ttaaaccctg gaagtcatct acccccgagt
      301 ataacaatac acaagtcttg ccaaagctaa ataagaggaa cataaatgaa ctggtggttc
      361 tagattgaag ctgtctatag tatccatctt tcatcccttg gtatatattc tgtatgcaag
      421 gatcatgaag gtgtaaatca tttaaggtcg tgtgagactt gctaatggac ttgtatgcac
      481 tactccattg gttagacaca ctaagtatgc atttgtttaa cttttgtcat ttcagataac
      541 ataaaggttt tattcatgat acttatagcc tactaacggg atgaaagcat gattgcttgc
      601 taatcatctt attattttgt aacaggttgg agccagtgaa ttctgtgatt tatacgagtt
      661 gttcatatta agcacaacaa gacgacttca aatgcaaaga aaaagggagg aggttttagc
      721 aaaccatgtg cactttctcc ccaatatgag agcccgtaat cccgaattgg cacgaactga
      781 ggttgtcaag agaatatggg cttatatcaa agaaaaacat ttgcaagatc caacatataa
      841 gcgaaagata ctttgctatg aaatgctccg taaaaatttt cgagtcaaga ccattgacat
      901 gtttcaaatg agcaaagcac ttaccaaacg tatttggctg ataaaagagg aatttgatga
      961 gccagaacaa agcgccaaaa gcaaagggtt caggatttgt ttttgtacct ccaatatcag
     1021 aagagctggt ccatttcttt ggtccgtatg aaaatgtacc atctcgcgct gaaattgcga
     1081 aagaaaatgt gggaatatat ataaaaaaaa cgagcttcag gattcatttg acataagaag
     1141 gattctatgt aacgataagt tgaaacaact atttaaattc gacgacatgt tcattggttt
     1201 catggtatca aagattttga cagctcattt catcagggaa aaggaacatt tata
//
LOCUS       XR_011757037            2604 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X1, ncRNA.
ACCESSION   XR_011757037
VERSION     XR_011757037.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2604
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2604
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa aggtccgttt ctaatatttg attccgactt aaatgatatc atcttcttct
      301 tttgggtttt atttgatgta tttcttttta aaaaatcaat tgttggaaat ttgtggggaa
      361 tctgcagctt gctttatgaa aatgtcccag ttttgacctg attcattgtt tttagtggca
      421 cttcattcac actgggagtg acttttgttt tggatataaa tggtattgat ttgatttcta
      481 ttatcatatc ttttgtgctt tatctatctg taatacttat ggatgttggg attactgaca
      541 agattgttga tttcttgatc cacagttgtg ggacattttc ggcacttttt agattatgtg
      601 ggcgtttttt aagttcatta tctatatctg atttctactt gaataatatc tgcttttttg
      661 ggtttttatt tgtttttgat ttcaattgtt agaattatgc aagggatctg caacttgctt
      721 ggttgctgct gcaggggctg catcgaaaat gctgtgaaga cagcttgcct cagttcgatc
      781 tgctgcaggg ttaaaagttt tttttttttt ttttgttatg ggaatcatgg ctgcatttag
      841 cagccgaaaa caaagagact ccatcagaga aacatggatg cctctaggaa atgacttact
      901 gaggttggag aaagaacagg gagttataat acgatctgtc attggacata ggtgggtaaa
      961 tctcaaagag attaatattg agtatttaac atcatttatg atcgtagtga cttactttga
     1021 tgtgtcaaga tgtccgggtc atctggtcag acagtgagtc aaaaatggga caggttgggt
     1081 tgacttgcac acactacttt gtttaattta tgattaatgc accgatcaat attacacaaa
     1141 cagtgttatt acaatagtaa taattttaat ctttgtatta aaccagttca aatgttgtac
     1201 gtgtagaaaa taaaccttgg gcaactgtca gtctctttga tcctttttga cccatacccc
     1261 ttttacgtaa ctttcttatt tgacccattg tgaaagcaac tcagaccgac cattaattga
     1321 gtacatggtc aaaactacaa ccttttaaaa gctatattga tgggttggtg cttcagtgca
     1381 acatcagatg ggcttttgga tctcgctatt gatgttgaag atggacaata cagggataat
     1441 ttctgactgg tatgaaatac actttgtagt cttgaaaaca gcagctatga aaatctgtta
     1501 ttccacatta agccataaat tttatggtat tgcacaacca tgtagaggga tatcatgagt
     1561 tgtcttctaa aactcaaatc tacttttcaa cggttgctac caagtgggat atgctgattt
     1621 caacatcaaa gtagatgatg atgttcatgt caatcttgga agtacaactt ataaataaat
     1681 atttaatctt taataaatct ttgtagtaca actgataaaa gatcgcacaa tggtagcctg
     1741 gtaggagttt aacttactca attttcctag gtatgattgg ctctaccttg gctcgtcatc
     1801 gctcaaaacc tcgtgtttat atagtttatc ttataactca tgatttatgc ttgaggggtc
     1861 aagtaccata aacccgaata ctggaaattt ggaaagacgg aaataaatac tttaggcttg
     1921 caaccagaca aatatatggt atatccaagg atttggcaac atttgttgca gttaatcgtg
     1981 gatgtgaaca agatttctaa atggattgta tccctcatgc ctgaagtggt acataagttt
     2041 atttctgata taaatggaaa gaaaaggaag gcttacatta caaattaggt gtatcggacc
     2101 ttttattgtt ctgaaatgta tgatggcgaa tgtgtgatga tcccaccatg tgtgatgaat
     2161 acaaacttgg tataaattct aatttgtgca atgagtatgg gctaaacaag ttattgggca
     2221 ctaaaaagcc cacttatttc aaatccagtg aactacactc gtgtttagac tgctgaagaa
     2281 ttgaatgaac caggccatcc tcctcggccc acaatgatgg ggttctggac ggccagatat
     2341 taagcttggt cacaggacat cgggtcgctg agatggcatc ttcactaact tatcaacctc
     2401 acgggtgaat ttgattcatg atacttgtac gtgaattttg tagtgacagt tacttgttca
     2461 tagcatgttt ttattattat cagatgcaca ttgtccttct atgaatatca agttatatgc
     2521 taaatgtctt agttattatt ttagcagtag gaatcttaat gaagcgtgta aacacttctt
     2581 tggatcagtg tttgaaaaat ggaa
//
LOCUS       XR_011757038            2489 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X2, ncRNA.
ACCESSION   XR_011757038
VERSION     XR_011757038.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2489
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2489
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa agcttgcttt atgaaaatgt cccagttttg acctgattca ttgtttttag
      301 tggcacttca ttcacactgg gagtgacttt tgttttggat ataaatggta ttgatttgat
      361 ttctattatc atatcttttg tgctttatct atctgtaata cttatggatg ttgggattac
      421 tgacaagatt gttgatttct tgatccacag ttgtgggaca ttttcggcac tttttagatt
      481 atgtgggcgt tttttaagtt cattatctat atctgatttc tacttgaata atatctgctt
      541 ttttgggttt ttatttgttt ttgatttcaa ttgttagaat tatgcaaggg atctgcaact
      601 tgcttggttg ctgctgcagg ggctgcatcg aaaatgctgt gaagacagct tgcctcagtt
      661 cgatctgctg cagggttaaa agtttttttt tttttttttg ttatgggaat catggctgca
      721 tttagcagcc gaaaacaaag agactccatc agagaaacat ggatgcctct aggaaatgac
      781 ttactgaggt tggagaaaga acagggagtt ataatacgat ctgtcattgg acataggtgg
      841 gtaaatctca aagagattaa tattgagtat ttaacatcat ttatgatcgt agtgacttac
      901 tttgatgtgt caagatgtcc gggtcatctg gtcagacagt gagtcaaaaa tgggacaggt
      961 tgggttgact tgcacacact actttgttta atttatgatt aatgcaccga tcaatattac
     1021 acaaacagtg ttattacaat agtaataatt ttaatctttg tattaaacca gttcaaatgt
     1081 tgtacgtgta gaaaataaac cttgggcaac tgtcagtctc tttgatcctt tttgacccat
     1141 acccctttta cgtaactttc ttatttgacc cattgtgaaa gcaactcaga ccgaccatta
     1201 attgagtaca tggtcaaaac tacaaccttt taaaagctat attgatgggt tggtgcttca
     1261 gtgcaacatc agatgggctt ttggatctcg ctattgatgt tgaagatgga caatacaggg
     1321 ataatttctg actggtatga aatacacttt gtagtcttga aaacagcagc tatgaaaatc
     1381 tgttattcca cattaagcca taaattttat ggtattgcac aaccatgtag agggatatca
     1441 tgagttgtct tctaaaactc aaatctactt ttcaacggtt gctaccaagt gggatatgct
     1501 gatttcaaca tcaaagtaga tgatgatgtt catgtcaatc ttggaagtac aacttataaa
     1561 taaatattta atctttaata aatctttgta gtacaactga taaaagatcg cacaatggta
     1621 gcctggtagg agtttaactt actcaatttt cctaggtatg attggctcta ccttggctcg
     1681 tcatcgctca aaacctcgtg tttatatagt ttatcttata actcatgatt tatgcttgag
     1741 gggtcaagta ccataaaccc gaatactgga aatttggaaa gacggaaata aatactttag
     1801 gcttgcaacc agacaaatat atggtatatc caaggatttg gcaacatttg ttgcagttaa
     1861 tcgtggatgt gaacaagatt tctaaatgga ttgtatccct catgcctgaa gtggtacata
     1921 agtttatttc tgatataaat ggaaagaaaa ggaaggctta cattacaaat taggtgtatc
     1981 ggacctttta ttgttctgaa atgtatgatg gcgaatgtgt gatgatccca ccatgtgtga
     2041 tgaatacaaa cttggtataa attctaattt gtgcaatgag tatgggctaa acaagttatt
     2101 gggcactaaa aagcccactt atttcaaatc cagtgaacta cactcgtgtt tagactgctg
     2161 aagaattgaa tgaaccaggc catcctcctc ggcccacaat gatggggttc tggacggcca
     2221 gatattaagc ttggtcacag gacatcgggt cgctgagatg gcatcttcac taacttatca
     2281 acctcacggg tgaatttgat tcatgatact tgtacgtgaa ttttgtagtg acagttactt
     2341 gttcatagca tgtttttatt attatcagat gcacattgtc cttctatgaa tatcaagtta
     2401 tatgctaaat gtcttagtta ttattttagc agtaggaatc ttaatgaagc gtgtaaacac
     2461 ttctttggat cagtgtttga aaaatggaa
//
LOCUS       XR_011757039            2374 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X3, ncRNA.
ACCESSION   XR_011757039
VERSION     XR_011757039.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2374
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2374
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa aggtccgttt ctaatatttg attccgactt aaatgatatc atcttcttct
      301 tttgggtttt atttgatgta tttcttttta aaaaatcaat tgttggaaat ttgtggggaa
      361 tctgcagctt gctttatgaa aatgtcccag ttttgacctg attcattgtt tttagtggca
      421 cttcattcac actgggagtg acttttgttt tggatataaa tgaattatgc aagggatctg
      481 caacttgctt ggttgctgct gcaggggctg catcgaaaat gctgtgaaga cagcttgcct
      541 cagttcgatc tgctgcaggg ttaaaagttt tttttttttt ttttgttatg ggaatcatgg
      601 ctgcatttag cagccgaaaa caaagagact ccatcagaga aacatggatg cctctaggaa
      661 atgacttact gaggttggag aaagaacagg gagttataat acgatctgtc attggacata
      721 ggtgggtaaa tctcaaagag attaatattg agtatttaac atcatttatg atcgtagtga
      781 cttactttga tgtgtcaaga tgtccgggtc atctggtcag acagtgagtc aaaaatggga
      841 caggttgggt tgacttgcac acactacttt gtttaattta tgattaatgc accgatcaat
      901 attacacaaa cagtgttatt acaatagtaa taattttaat ctttgtatta aaccagttca
      961 aatgttgtac gtgtagaaaa taaaccttgg gcaactgtca gtctctttga tcctttttga
     1021 cccatacccc ttttacgtaa ctttcttatt tgacccattg tgaaagcaac tcagaccgac
     1081 cattaattga gtacatggtc aaaactacaa ccttttaaaa gctatattga tgggttggtg
     1141 cttcagtgca acatcagatg ggcttttgga tctcgctatt gatgttgaag atggacaata
     1201 cagggataat ttctgactgg tatgaaatac actttgtagt cttgaaaaca gcagctatga
     1261 aaatctgtta ttccacatta agccataaat tttatggtat tgcacaacca tgtagaggga
     1321 tatcatgagt tgtcttctaa aactcaaatc tacttttcaa cggttgctac caagtgggat
     1381 atgctgattt caacatcaaa gtagatgatg atgttcatgt caatcttgga agtacaactt
     1441 ataaataaat atttaatctt taataaatct ttgtagtaca actgataaaa gatcgcacaa
     1501 tggtagcctg gtaggagttt aacttactca attttcctag gtatgattgg ctctaccttg
     1561 gctcgtcatc gctcaaaacc tcgtgtttat atagtttatc ttataactca tgatttatgc
     1621 ttgaggggtc aagtaccata aacccgaata ctggaaattt ggaaagacgg aaataaatac
     1681 tttaggcttg caaccagaca aatatatggt atatccaagg atttggcaac atttgttgca
     1741 gttaatcgtg gatgtgaaca agatttctaa atggattgta tccctcatgc ctgaagtggt
     1801 acataagttt atttctgata taaatggaaa gaaaaggaag gcttacatta caaattaggt
     1861 gtatcggacc ttttattgtt ctgaaatgta tgatggcgaa tgtgtgatga tcccaccatg
     1921 tgtgatgaat acaaacttgg tataaattct aatttgtgca atgagtatgg gctaaacaag
     1981 ttattgggca ctaaaaagcc cacttatttc aaatccagtg aactacactc gtgtttagac
     2041 tgctgaagaa ttgaatgaac caggccatcc tcctcggccc acaatgatgg ggttctggac
     2101 ggccagatat taagcttggt cacaggacat cgggtcgctg agatggcatc ttcactaact
     2161 tatcaacctc acgggtgaat ttgattcatg atacttgtac gtgaattttg tagtgacagt
     2221 tacttgttca tagcatgttt ttattattat cagatgcaca ttgtccttct atgaatatca
     2281 agttatatgc taaatgtctt agttattatt ttagcagtag gaatcttaat gaagcgtgta
     2341 aacacttctt tggatcagtg tttgaaaaat ggaa
//
LOCUS       XR_011757040            2259 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X4, ncRNA.
ACCESSION   XR_011757040
VERSION     XR_011757040.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2259
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2259
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa agcttgcttt atgaaaatgt cccagttttg acctgattca ttgtttttag
      301 tggcacttca ttcacactgg gagtgacttt tgttttggat ataaatgaat tatgcaaggg
      361 atctgcaact tgcttggttg ctgctgcagg ggctgcatcg aaaatgctgt gaagacagct
      421 tgcctcagtt cgatctgctg cagggttaaa agtttttttt tttttttttg ttatgggaat
      481 catggctgca tttagcagcc gaaaacaaag agactccatc agagaaacat ggatgcctct
      541 aggaaatgac ttactgaggt tggagaaaga acagggagtt ataatacgat ctgtcattgg
      601 acataggtgg gtaaatctca aagagattaa tattgagtat ttaacatcat ttatgatcgt
      661 agtgacttac tttgatgtgt caagatgtcc gggtcatctg gtcagacagt gagtcaaaaa
      721 tgggacaggt tgggttgact tgcacacact actttgttta atttatgatt aatgcaccga
      781 tcaatattac acaaacagtg ttattacaat agtaataatt ttaatctttg tattaaacca
      841 gttcaaatgt tgtacgtgta gaaaataaac cttgggcaac tgtcagtctc tttgatcctt
      901 tttgacccat acccctttta cgtaactttc ttatttgacc cattgtgaaa gcaactcaga
      961 ccgaccatta attgagtaca tggtcaaaac tacaaccttt taaaagctat attgatgggt
     1021 tggtgcttca gtgcaacatc agatgggctt ttggatctcg ctattgatgt tgaagatgga
     1081 caatacaggg ataatttctg actggtatga aatacacttt gtagtcttga aaacagcagc
     1141 tatgaaaatc tgttattcca cattaagcca taaattttat ggtattgcac aaccatgtag
     1201 agggatatca tgagttgtct tctaaaactc aaatctactt ttcaacggtt gctaccaagt
     1261 gggatatgct gatttcaaca tcaaagtaga tgatgatgtt catgtcaatc ttggaagtac
     1321 aacttataaa taaatattta atctttaata aatctttgta gtacaactga taaaagatcg
     1381 cacaatggta gcctggtagg agtttaactt actcaatttt cctaggtatg attggctcta
     1441 ccttggctcg tcatcgctca aaacctcgtg tttatatagt ttatcttata actcatgatt
     1501 tatgcttgag gggtcaagta ccataaaccc gaatactgga aatttggaaa gacggaaata
     1561 aatactttag gcttgcaacc agacaaatat atggtatatc caaggatttg gcaacatttg
     1621 ttgcagttaa tcgtggatgt gaacaagatt tctaaatgga ttgtatccct catgcctgaa
     1681 gtggtacata agtttatttc tgatataaat ggaaagaaaa ggaaggctta cattacaaat
     1741 taggtgtatc ggacctttta ttgttctgaa atgtatgatg gcgaatgtgt gatgatccca
     1801 ccatgtgtga tgaatacaaa cttggtataa attctaattt gtgcaatgag tatgggctaa
     1861 acaagttatt gggcactaaa aagcccactt atttcaaatc cagtgaacta cactcgtgtt
     1921 tagactgctg aagaattgaa tgaaccaggc catcctcctc ggcccacaat gatggggttc
     1981 tggacggcca gatattaagc ttggtcacag gacatcgggt cgctgagatg gcatcttcac
     2041 taacttatca acctcacggg tgaatttgat tcatgatact tgtacgtgaa ttttgtagtg
     2101 acagttactt gttcatagca tgtttttatt attatcagat gcacattgtc cttctatgaa
     2161 tatcaagtta tatgctaaat gtcttagtta ttattttagc agtaggaatc ttaatgaagc
     2221 gtgtaaacac ttctttggat cagtgtttga aaaatggaa
//
LOCUS       XR_011757041            2581 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X5, ncRNA.
ACCESSION   XR_011757041
VERSION     XR_011757041.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2581
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2581
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 cccaaactat ctgatcgctc tctgttcgaa attagggtta gcattatgta acccctaaat
       61 ttcactcaca ctatatacga aattagggtt ttcgttggag gttttgattg aatgatgatg
      121 tcagtcgttg tagcaggact gataacaaga ctgttgagtt cttggatcca cagttgtggg
      181 acatttatcg ggcgtcttta tagcttctca ggtgcatttt ttttgaaagg tccgtttcta
      241 atatttgatt ccgacttaaa tgatatcatc ttcttctttt gggttttatt tgatgtattt
      301 ctttttaaaa aatcaattgt tggaaatttg tggggaatct gcagcttgct ttatgaaaat
      361 gtcccagttt tgacctgatt cattgttttt agtggcactt cattcacact gggagtgact
      421 tttgttttgg atataaatgg tattgatttg atttctatta tcatatcttt tgtgctttat
      481 ctatctgtaa tacttatgga tgttgggatt actgacaaga ttgttgattt cttgatccac
      541 agttgtggga cattttcggc actttttaga ttatgtgggc gttttttaag ttcattatct
      601 atatctgatt tctacttgaa taatatctgc ttttttgggt ttttatttgt ttttgatttc
      661 aattgttaga attatgcaag ggatctgcaa cttgcttggt tgctgctgca ggggctgcat
      721 cgaaaatgct gtgaagacag cttgcctcag ttcgatctgc tgcagggtta aaagtttttt
      781 tttttttttt tgttatggga atcatggctg catttagcag ccgaaaacaa agagactcca
      841 tcagagaaac atggatgcct ctaggaaatg acttactgag gttggagaaa gaacagggag
      901 ttataatacg atctgtcatt ggacataggt gggtaaatct caaagagatt aatattgagt
      961 atttaacatc atttatgatc gtagtgactt actttgatgt gtcaagatgt ccgggtcatc
     1021 tggtcagaca gtgagtcaaa aatgggacag gttgggttga cttgcacaca ctactttgtt
     1081 taatttatga ttaatgcacc gatcaatatt acacaaacag tgttattaca atagtaataa
     1141 ttttaatctt tgtattaaac cagttcaaat gttgtacgtg tagaaaataa accttgggca
     1201 actgtcagtc tctttgatcc tttttgaccc ataccccttt tacgtaactt tcttatttga
     1261 cccattgtga aagcaactca gaccgaccat taattgagta catggtcaaa actacaacct
     1321 tttaaaagct atattgatgg gttggtgctt cagtgcaaca tcagatgggc ttttggatct
     1381 cgctattgat gttgaagatg gacaatacag ggataatttc tgactggtat gaaatacact
     1441 ttgtagtctt gaaaacagca gctatgaaaa tctgttattc cacattaagc cataaatttt
     1501 atggtattgc acaaccatgt agagggatat catgagttgt cttctaaaac tcaaatctac
     1561 ttttcaacgg ttgctaccaa gtgggatatg ctgatttcaa catcaaagta gatgatgatg
     1621 ttcatgtcaa tcttggaagt acaacttata aataaatatt taatctttaa taaatctttg
     1681 tagtacaact gataaaagat cgcacaatgg tagcctggta ggagtttaac ttactcaatt
     1741 ttcctaggta tgattggctc taccttggct cgtcatcgct caaaacctcg tgtttatata
     1801 gtttatctta taactcatga tttatgcttg aggggtcaag taccataaac ccgaatactg
     1861 gaaatttgga aagacggaaa taaatacttt aggcttgcaa ccagacaaat atatggtata
     1921 tccaaggatt tggcaacatt tgttgcagtt aatcgtggat gtgaacaaga tttctaaatg
     1981 gattgtatcc ctcatgcctg aagtggtaca taagtttatt tctgatataa atggaaagaa
     2041 aaggaaggct tacattacaa attaggtgta tcggaccttt tattgttctg aaatgtatga
     2101 tggcgaatgt gtgatgatcc caccatgtgt gatgaataca aacttggtat aaattctaat
     2161 ttgtgcaatg agtatgggct aaacaagtta ttgggcacta aaaagcccac ttatttcaaa
     2221 tccagtgaac tacactcgtg tttagactgc tgaagaattg aatgaaccag gccatcctcc
     2281 tcggcccaca atgatggggt tctggacggc cagatattaa gcttggtcac aggacatcgg
     2341 gtcgctgaga tggcatcttc actaacttat caacctcacg ggtgaatttg attcatgata
     2401 cttgtacgtg aattttgtag tgacagttac ttgttcatag catgttttta ttattatcag
     2461 atgcacattg tccttctatg aatatcaagt tatatgctaa atgtcttagt tattatttta
     2521 gcagtaggaa tcttaatgaa gcgtgtaaac acttctttgg atcagtgttt gaaaaatgga
     2581 a
//
LOCUS       XR_011757042            2179 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X6, ncRNA.
ACCESSION   XR_011757042
VERSION     XR_011757042.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2179
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2179
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa aggtccgttt ctaatatttg attccgactt aaatgatatc atcttcttct
      301 tttgggtttt atttgatgta tttcttttta aaaaatcaat tgttggaaat ttgtggggaa
      361 tctgcagctt gctttatgaa aatgtcccag ttttgacctg attcattgtt tttagtggca
      421 cttcattcac actgggagtg acttttgttt tggatataaa tggtattgat ttgatttcta
      481 ttatcatatc ttttgtgctt tatctatctg taatacttat ggatgttggg attactgaca
      541 agattgttga tttcttgatc cacagttgtg ggacattttc ggcacttttt agattatgtg
      601 ggcgtttttt aagttcatta tctatatctg atttctactt gaataatatc tgcttttttg
      661 ggtttttatt tgtttttgat ttcaattgtt agaattatgc aagggatctg caacttgctt
      721 ggttgctgct gcaggggctg catcgaaaat gctgtgaaga cagcttgcct cagttcgatc
      781 tgctgcaggg ttaaaagttt tttttttttt ttttgttatg ggaatcatgg ctgcatttag
      841 cagccgaaaa caaagagact ccatcagaga aacatggatg cctctaggaa atgacttact
      901 gaggttggag aaagaacagg gagttataat acgatctgtc attggacata gtgcaacatc
      961 agatgggctt ttggatctcg ctattgatgt tgaagatgga caatacaggg ataatttctg
     1021 actggtatga aatacacttt gtagtcttga aaacagcagc tatgaaaatc tgttattcca
     1081 cattaagcca taaattttat ggtattgcac aaccatgtag agggatatca tgagttgtct
     1141 tctaaaactc aaatctactt ttcaacggtt gctaccaagt gggatatgct gatttcaaca
     1201 tcaaagtaga tgatgatgtt catgtcaatc ttggaagtac aacttataaa taaatattta
     1261 atctttaata aatctttgta gtacaactga taaaagatcg cacaatggta gcctggtagg
     1321 agtttaactt actcaatttt cctaggtatg attggctcta ccttggctcg tcatcgctca
     1381 aaacctcgtg tttatatagt ttatcttata actcatgatt tatgcttgag gggtcaagta
     1441 ccataaaccc gaatactgga aatttggaaa gacggaaata aatactttag gcttgcaacc
     1501 agacaaatat atggtatatc caaggatttg gcaacatttg ttgcagttaa tcgtggatgt
     1561 gaacaagatt tctaaatgga ttgtatccct catgcctgaa gtggtacata agtttatttc
     1621 tgatataaat ggaaagaaaa ggaaggctta cattacaaat taggtgtatc ggacctttta
     1681 ttgttctgaa atgtatgatg gcgaatgtgt gatgatccca ccatgtgtga tgaatacaaa
     1741 cttggtataa attctaattt gtgcaatgag tatgggctaa acaagttatt gggcactaaa
     1801 aagcccactt atttcaaatc cagtgaacta cactcgtgtt tagactgctg aagaattgaa
     1861 tgaaccaggc catcctcctc ggcccacaat gatggggttc tggacggcca gatattaagc
     1921 ttggtcacag gacatcgggt cgctgagatg gcatcttcac taacttatca acctcacggg
     1981 tgaatttgat tcatgatact tgtacgtgaa ttttgtagtg acagttactt gttcatagca
     2041 tgtttttatt attatcagat gcacattgtc cttctatgaa tatcaagtta tatgctaaat
     2101 gtcttagtta ttattttagc agtaggaatc ttaatgaagc gtgtaaacac ttctttggat
     2161 cagtgtttga aaaatggaa
//
LOCUS       XR_011757043            2164 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X7, ncRNA.
ACCESSION   XR_011757043
VERSION     XR_011757043.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2164
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2164
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa agaattatgc aagggatctg caacttgctt ggttgctgct gcaggggctg
      301 catcgaaaat gctgtgaaga cagcttgcct cagttcgatc tgctgcaggg ttaaaagttt
      361 tttttttttt ttttgttatg ggaatcatgg ctgcatttag cagccgaaaa caaagagact
      421 ccatcagaga aacatggatg cctctaggaa atgacttact gaggttggag aaagaacagg
      481 gagttataat acgatctgtc attggacata ggtgggtaaa tctcaaagag attaatattg
      541 agtatttaac atcatttatg atcgtagtga cttactttga tgtgtcaaga tgtccgggtc
      601 atctggtcag acagtgagtc aaaaatggga caggttgggt tgacttgcac acactacttt
      661 gtttaattta tgattaatgc accgatcaat attacacaaa cagtgttatt acaatagtaa
      721 taattttaat ctttgtatta aaccagttca aatgttgtac gtgtagaaaa taaaccttgg
      781 gcaactgtca gtctctttga tcctttttga cccatacccc ttttacgtaa ctttcttatt
      841 tgacccattg tgaaagcaac tcagaccgac cattaattga gtacatggtc aaaactacaa
      901 ccttttaaaa gctatattga tgggttggtg cttcagtgca acatcagatg ggcttttgga
      961 tctcgctatt gatgttgaag atggacaata cagggataat ttctgactgg tatgaaatac
     1021 actttgtagt cttgaaaaca gcagctatga aaatctgtta ttccacatta agccataaat
     1081 tttatggtat tgcacaacca tgtagaggga tatcatgagt tgtcttctaa aactcaaatc
     1141 tacttttcaa cggttgctac caagtgggat atgctgattt caacatcaaa gtagatgatg
     1201 atgttcatgt caatcttgga agtacaactt ataaataaat atttaatctt taataaatct
     1261 ttgtagtaca actgataaaa gatcgcacaa tggtagcctg gtaggagttt aacttactca
     1321 attttcctag gtatgattgg ctctaccttg gctcgtcatc gctcaaaacc tcgtgtttat
     1381 atagtttatc ttataactca tgatttatgc ttgaggggtc aagtaccata aacccgaata
     1441 ctggaaattt ggaaagacgg aaataaatac tttaggcttg caaccagaca aatatatggt
     1501 atatccaagg atttggcaac atttgttgca gttaatcgtg gatgtgaaca agatttctaa
     1561 atggattgta tccctcatgc ctgaagtggt acataagttt atttctgata taaatggaaa
     1621 gaaaaggaag gcttacatta caaattaggt gtatcggacc ttttattgtt ctgaaatgta
     1681 tgatggcgaa tgtgtgatga tcccaccatg tgtgatgaat acaaacttgg tataaattct
     1741 aatttgtgca atgagtatgg gctaaacaag ttattgggca ctaaaaagcc cacttatttc
     1801 aaatccagtg aactacactc gtgtttagac tgctgaagaa ttgaatgaac caggccatcc
     1861 tcctcggccc acaatgatgg ggttctggac ggccagatat taagcttggt cacaggacat
     1921 cgggtcgctg agatggcatc ttcactaact tatcaacctc acgggtgaat ttgattcatg
     1981 atacttgtac gtgaattttg tagtgacagt tacttgttca tagcatgttt ttattattat
     2041 cagatgcaca ttgtccttct atgaatatca agttatatgc taaatgtctt agttattatt
     2101 ttagcagtag gaatcttaat gaagcgtgta aacacttctt tggatcagtg tttgaaaaat
     2161 ggaa
//
LOCUS       XR_011757044            2508 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X8, ncRNA.
ACCESSION   XR_011757044
VERSION     XR_011757044.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2508
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2508
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa aggtccgttt ctaatatttg attccgactt aaatgatatc atcttcttct
      301 tttgggtttt atttgatgta tttcttttta aaaaatcaat tgttggaaat ttgtggggaa
      361 tctgcagctt gctttatgaa aatgtcccag ttttgacctg attcattgtt tttagtggca
      421 cttcattcac actgggagtg acttttgttt tggatataaa tggtattgat ttgatttcta
      481 ttatcatatc ttttgtgctt tatctatctg taatacttat ggatgttggg attactgaca
      541 agattgttga tttcttgatc cacagttgtg ggacattttc ggcacttttt agattatgtg
      601 ggcgtttttt aagttcatta tctatatctg atttctactt gaataatatc tgcttttttg
      661 ggtttttatt tgtttttgat ttcaattgtt agaattatgc aagggatctg caacttgctt
      721 ggttgctgct gcaggggctg catcgaaaat gctgtgaaga cagcttgcct cagttcgatc
      781 tgctgcaggg ttaaaagttt tttttttttt ttttgttatg ggaatcatgg ctgcatttag
      841 cagccgaaaa caaagagact ccatcagaga aacatggatg cctctaggaa atgacttact
      901 gaggttggag aaagaacagg gagttataat acgatctgtc attggacata ggtgggtaaa
      961 tctcaaagag attaatattg agtatttaac atcatttatg atcgtagtga cttactttga
     1021 tgtgtcaaga tgtccgggtc atctggtcag acagtgagtc aaaaatggga caggttgggt
     1081 tgacttgcac acactacttt gtttaattta tgattaatgc accgatcaat attacacaaa
     1141 cagtgttatt acaatagtaa taattttaat ctttgtatta aaccagttca aatgttgtac
     1201 gtgtagaaaa taaaccttgg gcaactgtca gtctctttga tcctttttga cccatacccc
     1261 ttttacgtaa ctttcttatt tgacccattg tgaaagcaac tcagaccgac cattaattga
     1321 gtacatggtc aaaactacaa ccttttaaaa gctatattga tgggttggtg cttcagtgca
     1381 acatcagatg ggcttttgga tctcgctatt gatgttgaag atggacaata cagggataat
     1441 ttctgactga gggatatcat gagttgtctt ctaaaactca aatctacttt tcaacggttg
     1501 ctaccaagtg ggatatgctg atttcaacat caaagtagat gatgatgttc atgtcaatct
     1561 tggaagtaca acttataaat aaatatttaa tctttaataa atctttgtag tacaactgat
     1621 aaaagatcgc acaatggtag cctggtagga gtttaactta ctcaattttc ctaggtatga
     1681 ttggctctac cttggctcgt catcgctcaa aacctcgtgt ttatatagtt tatcttataa
     1741 ctcatgattt atgcttgagg ggtcaagtac cataaacccg aatactggaa atttggaaag
     1801 acggaaataa atactttagg cttgcaacca gacaaatata tggtatatcc aaggatttgg
     1861 caacatttgt tgcagttaat cgtggatgtg aacaagattt ctaaatggat tgtatccctc
     1921 atgcctgaag tggtacataa gtttatttct gatataaatg gaaagaaaag gaaggcttac
     1981 attacaaatt aggtgtatcg gaccttttat tgttctgaaa tgtatgatgg cgaatgtgtg
     2041 atgatcccac catgtgtgat gaatacaaac ttggtataaa ttctaatttg tgcaatgagt
     2101 atgggctaaa caagttattg ggcactaaaa agcccactta tttcaaatcc agtgaactac
     2161 actcgtgttt agactgctga agaattgaat gaaccaggcc atcctcctcg gcccacaatg
     2221 atggggttct ggacggccag atattaagct tggtcacagg acatcgggtc gctgagatgg
     2281 catcttcact aacttatcaa cctcacgggt gaatttgatt catgatactt gtacgtgaat
     2341 tttgtagtga cagttacttg ttcatagcat gtttttatta ttatcagatg cacattgtcc
     2401 ttctatgaat atcaagttat atgctaaatg tcttagttat tattttagca gtaggaatct
     2461 taatgaagcg tgtaaacact tctttggatc agtgtttgaa aaatggaa
//
LOCUS       XR_011757045            2283 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X9, ncRNA.
ACCESSION   XR_011757045
VERSION     XR_011757045.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2283
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2283
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa aggtccgttt ctaatatttg attccgactt aaatgatatc atcttcttct
      301 tttgggtttt atttgatgta tttcttttta aaaaatcaat tgttggaaat ttgtggggaa
      361 tctgcagctt gctttatgaa aatgtcccag ttttgacctg attcattgtt tttagtggca
      421 cttcattcac actgggagtg acttttgttt tggatataaa tggtattgat ttgatttcta
      481 ttatcatatc ttttgtgctt tatctatctg taatacttat ggatgttggg attactgaca
      541 agattgttga tttcttgatc cacagttgtg ggacattttc ggcacttttt agattatgtg
      601 ggcgtttttt aagttcatta tctatatctg atttctactt gaataatatc tgcttttttg
      661 ggtttttatt tgtttttgat ttcaattgtt agaattatgc aagggatctg caacttgctt
      721 ggttgctgct gcaggggctg catcgaaaat gctgtgaaga cagcttgcct cagttcgatc
      781 tgctgcaggg ttaaaagttt tttttttttt ttttgttatg ggaatcatgg ctgcatttag
      841 cagccgaaaa caaagagact ccatcagaga aacatggatg cctctaggaa atgacttact
      901 gaggttggag aaagaacagg gagttataat acgatctgtc attggacata ggtgggtaaa
      961 tctcaaagag attaatattg agtatttaac atcatttatg atcgtagtga cttactttga
     1021 tgtgtcaaga tgtccgggtc atctggtcag acagtgagtc aaaaatggga caggttgggt
     1081 tgacttgcac acactacttt gtttaattta tgattaatgc accgatcaat attacacaaa
     1141 cagtgttatt acaatagtaa taattttaat ctttgtatta aaccagttca aatgttgtac
     1201 gtgtagaaaa taaaccttgg gcaactgtca gtctctttga tcctttttga cccatacccc
     1261 ttttacgtaa ctttcttatt tgacccattg tgaaagcaac tcagaccgac cattaattga
     1321 gtacatggtc aaaactacaa ccttttaaaa gctatattga tgggttggtg cttcagtgca
     1381 acatcagatg ggcttttgga tctcgctatt gatgttgaag atggacaata cagggataat
     1441 ttctgactgg tatgattggc tctaccttgg ctcgtcatcg ctcaaaacct cgtgtttata
     1501 tagtttatct tataactcat gatttatgct tgaggggtca agtaccataa acccgaatac
     1561 tggaaatttg gaaagacgga aataaatact ttaggcttgc aaccagacaa atatatggta
     1621 tatccaagga tttggcaaca tttgttgcag ttaatcgtgg atgtgaacaa gatttctaaa
     1681 tggattgtat ccctcatgcc tgaagtggta cataagttta tttctgatat aaatggaaag
     1741 aaaaggaagg cttacattac aaattaggtg tatcggacct tttattgttc tgaaatgtat
     1801 gatggcgaat gtgtgatgat cccaccatgt gtgatgaata caaacttggt ataaattcta
     1861 atttgtgcaa tgagtatggg ctaaacaagt tattgggcac taaaaagccc acttatttca
     1921 aatccagtga actacactcg tgtttagact gctgaagaat tgaatgaacc aggccatcct
     1981 cctcggccca caatgatggg gttctggacg gccagatatt aagcttggtc acaggacatc
     2041 gggtcgctga gatggcatct tcactaactt atcaacctca cgggtgaatt tgattcatga
     2101 tacttgtacg tgaattttgt agtgacagtt acttgttcat agcatgtttt tattattatc
     2161 agatgcacat tgtccttcta tgaatatcaa gttatatgct aaatgtctta gttattattt
     2221 tagcagtagg aatcttaatg aagcgtgtaa acacttcttt ggatcagtgt ttgaaaaatg
     2281 gaa
//
LOCUS       XR_011757046            2083 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X10, ncRNA.
ACCESSION   XR_011757046
VERSION     XR_011757046.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2083
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2083
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa aggtccgttt ctaatatttg attccgactt aaatgatatc atcttcttct
      301 tttgggtttt atttgatgta tttcttttta aaaaatcaat tgttggaaat ttgtggggaa
      361 tctgcagctt gctttatgaa aatgtcccag ttttgacctg attcattgtt tttagtggca
      421 cttcattcac actgggagtg acttttgttt tggatataaa tggtattgat ttgatttcta
      481 ttatcatatc ttttgtgctt tatctatctg taatacttat ggatgttggg attactgaca
      541 agattgttga tttcttgatc cacagttgtg ggacattttc ggcacttttt agattatgtg
      601 ggcgtttttt aagttcatta tctatatctg atttctactt gaataatatc tgcttttttg
      661 ggtttttatt tgtttttgat ttcaattgtt agaattatgc aagggatctg caacttgctt
      721 ggttgctgct gcaggggctg catcgaaaat gctgtgaaga cagcttgcct cagttcgatc
      781 tgctgcaggg ttaaaagttt tttttttttt ttttgttatg ggaatcatgg ctgcatttag
      841 cagccgaaaa caaagagact ccatcagaga aacatggatg cctctaggaa atgacttact
      901 gaggttggag aaagaacagg gagttataat acgatctgtc attggacata gtgcaacatc
      961 agatgggctt ttggatctcg ctattgatgt tgaagatgga caatacaggg ataatttctg
     1021 actgagggat atcatgagtt gtcttctaaa actcaaatct acttttcaac ggttgctacc
     1081 aagtgggata tgctgatttc aacatcaaag tagatgatga tgttcatgtc aatcttggaa
     1141 gtacaactta taaataaata tttaatcttt aataaatctt tgtagtacaa ctgataaaag
     1201 atcgcacaat ggtagcctgg taggagttta acttactcaa ttttcctagg tatgattggc
     1261 tctaccttgg ctcgtcatcg ctcaaaacct cgtgtttata tagtttatct tataactcat
     1321 gatttatgct tgaggggtca agtaccataa acccgaatac tggaaatttg gaaagacgga
     1381 aataaatact ttaggcttgc aaccagacaa atatatggta tatccaagga tttggcaaca
     1441 tttgttgcag ttaatcgtgg atgtgaacaa gatttctaaa tggattgtat ccctcatgcc
     1501 tgaagtggta cataagttta tttctgatat aaatggaaag aaaaggaagg cttacattac
     1561 aaattaggtg tatcggacct tttattgttc tgaaatgtat gatggcgaat gtgtgatgat
     1621 cccaccatgt gtgatgaata caaacttggt ataaattcta atttgtgcaa tgagtatggg
     1681 ctaaacaagt tattgggcac taaaaagccc acttatttca aatccagtga actacactcg
     1741 tgtttagact gctgaagaat tgaatgaacc aggccatcct cctcggccca caatgatggg
     1801 gttctggacg gccagatatt aagcttggtc acaggacatc gggtcgctga gatggcatct
     1861 tcactaactt atcaacctca cgggtgaatt tgattcatga tacttgtacg tgaattttgt
     1921 agtgacagtt acttgttcat agcatgtttt tattattatc agatgcacat tgtccttcta
     1981 tgaatatcaa gttatatgct aaatgtctta gttattattt tagcagtagg aatcttaatg
     2041 aagcgtgtaa acacttcttt ggatcagtgt ttgaaaaatg gaa
//
LOCUS       XR_011757047            2168 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X11, ncRNA.
ACCESSION   XR_011757047
VERSION     XR_011757047.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2168
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..2168
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa aggtccgttt ctaatatttg attccgactt aaatgatatc atcttcttct
      301 tttgggtttt atttgatgta tttcttttta aaaaatcaat tgttggaaat ttgtggggaa
      361 tctgcagctt gctttatgaa aatgtcccag ttttgacctg attcattgtt tttagtggca
      421 cttcattcac actgggagtg acttttgttt tggatataaa tggtattgat ttgatttcta
      481 ttatcatatc ttttgtgctt tatctatctg taatacttat ggatgttggg attactgaca
      541 agattgttga tttcttgatc cacagttgtg ggacattttc ggcacttttt agattatgtg
      601 ggcgtttttt aagttcatta tctatatctg atttctactt gaataatatc tgcttttttg
      661 ggtttttatt tgtttttgat ttcaattgtt agaattatgc aagggatctg caacttgctt
      721 ggttgctgct gcaggggctg catcgaaaat gctgtgaaga cagcttgcct cagttcgatc
      781 tgctgcaggg ttaaaagttt tttttttttt ttttgttatg ggaatcatgg ctgcatttag
      841 cagccgaaaa caaagagact ccatcagaga aacatggatg cctctaggaa atgacttact
      901 gaggttggag aaagaacagg gagttataat acgatctgtc attggacata gatgggcttt
      961 tggatctcgc tattgatgtt gaagatggac aatacaggga taatttctga ctggtatgaa
     1021 atacactttg tagtcttgaa aacagcagct atgaaaatct gttattccac attaagccat
     1081 aaattttatg gtattgcaca accatgtaga gggatatcat gagttgtctt ctaaaactca
     1141 aatctacttt tcaacggttg ctaccaagtg ggatatgctg atttcaacat caaagtagat
     1201 gatgatgttc atgtcaatct tggaagtaca acttataaat aaatatttaa tctttaataa
     1261 atctttgtag tacaactgat aaaagatcgc acaatggtag cctggtagga gtttaactta
     1321 ctcaattttc ctaggtatga ttggctctac cttggctcgt catcgctcaa aacctcgtgt
     1381 ttatatagtt tatcttataa ctcatgattt atgcttgagg ggtcaagtac cataaacccg
     1441 aatactggaa atttggaaag acggaaataa atactttagg cttgcaacca gacaaatata
     1501 tggtatatcc aaggatttgg caacatttgt tgcagttaat cgtggatgtg aacaagattt
     1561 ctaaatggat tgtatccctc atgcctgaag tggtacataa gtttatttct gatataaatg
     1621 gaaagaaaag gaaggcttac attacaaatt aggtgtatcg gaccttttat tgttctgaaa
     1681 tgtatgatgg cgaatgtgtg atgatcccac catgtgtgat gaatacaaac ttggtataaa
     1741 ttctaatttg tgcaatgagt atgggctaaa caagttattg ggcactaaaa agcccactta
     1801 tttcaaatcc agtgaactac actcgtgttt agactgctga agaattgaat gaaccaggcc
     1861 atcctcctcg gcccacaatg atggggttct ggacggccag atattaagct tggtcacagg
     1921 acatcgggtc gctgagatgg catcttcact aacttatcaa cctcacgggt gaatttgatt
     1981 catgatactt gtacgtgaat tttgtagtga cagttacttg ttcatagcat gtttttatta
     2041 ttatcagatg cacattgtcc ttctatgaat atcaagttat atgctaaatg tcttagttat
     2101 tattttagca gtaggaatct taatgaagcg tgtaaacact tctttggatc agtgtttgaa
     2161 aaatggaa
//
LOCUS       XR_011757048            1858 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839707), transcript variant X12, ncRNA.
ACCESSION   XR_011757048
VERSION     XR_011757048.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1858
                     /gene="LOC139839707"
                     /note="uncharacterized LOC139839707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839707"
     ncRNA           1..1858
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839707"
                     /product="uncharacterized lncRNA, transcript variant X12"
                     /db_xref="GeneID:139839707"
ORIGIN      
        1 tcgaaattag ggttagcatt atgtaacccc taaatttcac tcacactata tacgaaatta
       61 gggttttcgt tggaggtttt gattgaatga tgatgtcagt cgttgtagca ggtattcaac
      121 aaacgctctg tgcttgcaaa tgagatcgcg ttgaatttgg actgataaca agactgttga
      181 gttcttggat ccacagttgt gggacattta tcgggcgtct ttatagcttc tcaggtgcat
      241 tttttttgaa aggtccgttt ctaatatttg attccgactt aaatgatatc atcttcttct
      301 tttgggtttt atttgatgta tttcttttta aaaaatcaat tgttggaaat ttgtggggaa
      361 tctgcagctt gctttatgaa aatgtcccag ttttgacctg attcattgtt tttagtggca
      421 cttcattcac actgggagtg acttttgttt tggatataaa tggtattgat ttgatttcta
      481 ttatcatatc ttttgtgctt tatctatctg taatacttat ggatgttggg attactgaca
      541 agattgttga tttcttgatc cacagttgtg ggacattttc ggcacttttt agattatgtg
      601 ggcgtttttt aagttcatta tctatatctg atttctactt gaataatatc tgcttttttg
      661 ggtttttatt tgtttttgat ttcaattgtt agaattatgc aagggatctg caacttgctt
      721 ggttgctgct gcaggggctg catcgaaaat gctgtgaaga cagcttgcct cagttcgatc
      781 tgctgcaggg ttaaaagttt tttttttttt ttttgttatg ggaatcatgg ctgcatttag
      841 cagccgaaaa caaagagact ccatcagaga aacatggatg cctctaggaa atgacttact
      901 gaggttggag aaagaacagg gagttataat acgatctgtc attggacata gtgcaacatc
      961 agatgggctt ttggatctcg ctattgatgt tgaagatgga caatacaggg ataatttctg
     1021 actggtatga ttggctctac cttggctcgt catcgctcaa aacctcgtgt ttatatagtt
     1081 tatcttataa ctcatgattt atgcttgagg ggtcaagtac cataaacccg aatactggaa
     1141 atttggaaag acggaaataa atactttagg cttgcaacca gacaaatata tggtatatcc
     1201 aaggatttgg caacatttgt tgcagttaat cgtggatgtg aacaagattt ctaaatggat
     1261 tgtatccctc atgcctgaag tggtacataa gtttatttct gatataaatg gaaagaaaag
     1321 gaaggcttac attacaaatt aggtgtatcg gaccttttat tgttctgaaa tgtatgatgg
     1381 cgaatgtgtg atgatcccac catgtgtgat gaatacaaac ttggtataaa ttctaatttg
     1441 tgcaatgagt atgggctaaa caagttattg ggcactaaaa agcccactta tttcaaatcc
     1501 agtgaactac actcgtgttt agactgctga agaattgaat gaaccaggcc atcctcctcg
     1561 gcccacaatg atggggttct ggacggccag atattaagct tggtcacagg acatcgggtc
     1621 gctgagatgg catcttcact aacttatcaa cctcacgggt gaatttgatt catgatactt
     1681 gtacgtgaat tttgtagtga cagttacttg ttcatagcat gtttttatta ttatcagatg
     1741 cacattgtcc ttctatgaat atcaagttat atgctaaatg tcttagttat tattttagca
     1801 gtaggaatct taatgaagcg tgtaaacact tctttggatc agtgtttgaa aaatggaa
//
LOCUS       XM_071829846             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MET1,
            chloroplastic-like (LOC139839708), mRNA.
ACCESSION   XM_071829846
VERSION     XM_071829846.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139839708"
                     /note="protein MET1, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839708"
     CDS             258..602
                     /gene="LOC139839708"
                     /codon_start=1
                     /product="protein MET1, chloroplastic-like"
                     /protein_id="XP_071685947.1"
                     /db_xref="GeneID:139839708"
                     /translation="MEEASKLTEKEIIRAERNSGIVSGELREIQIQNYLRKKEQKETR
                     ERELREGLQLYKSGKYEEALEKFESVLGSKLEINEASVASYNVACCYSKLNQIQAGLS
                     ALKDALQLDFLL"
     misc_feature    384..>584
                     /gene="LOC139839708"
                     /note="LOW PSII ACCUMULATION1; Provisional; Region: LPA1;
                     PLN03098"
                     /db_xref="CDD:215573"
     misc_feature    399..479
                     /gene="LOC139839708"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    492..587
                     /gene="LOC139839708"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     polyA_site      660
                     /gene="LOC139839708"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctacaccat acctacgacc cataccttca agtcatccac cttaccttca atccatatct
       61 tcacttttcc cttactttct accaaacaac aattgaagca atttagggtt ggtgtctttc
      121 tcacctggcg tgtatttctt aatccacatc gacatctaca aattagggtt ttaccatttt
      181 ttgttgtttt gaaggttgat gtgcatcagt tgtggttgtt tgtttggcag gatctggtgc
      241 gttgtggaca agtgaatatg gaagaagcaa gtaagctaac cgaaaaggag atcattcggg
      301 ctgagagaaa ttctggaatt gttagcggtg aacttaggga aattcagata caaaattact
      361 tgaggaagaa agaacaaaag gaaactcgag aaagggagct tcgtgaaggc ttgcagctat
      421 acaagagtgg aaagtatgaa gaagcattgg aaaagtttga gtcggttttg gggtcaaaac
      481 tagagattaa tgaagcttcg gtggcaagtt acaacgttgc atgctgctat tctaagctaa
      541 atcagataca agccggactt tctgctttaa aagatgcttt gcaattggac tttctgcttt
      601 aatttgagga cccgggaact gttgaaaagt ggatgtacac acgcaacaac aacaacaaaa
//
LOCUS       XM_071829847            2382 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GATA transcription factor
            26-like (LOC139839709), mRNA.
ACCESSION   XM_071829847
VERSION     XM_071829847.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2382
                     /gene="LOC139839709"
                     /note="GATA transcription factor 26-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139839709"
     CDS             422..2071
                     /gene="LOC139839709"
                     /codon_start=1
                     /product="GATA transcription factor 26-like"
                     /protein_id="XP_071685948.1"
                     /db_xref="GeneID:139839709"
                     /translation="MGKQGPCYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSLVN
                     YTPLHSRAEPDDLVDHRVVSRVKTISVKNKEPKVLKRKHNCDNVVGGPTSIMLDRNTM
                     VAYDQHNQGFRKMFDEDYSNRSSSGSAISNSDGYMPPGSGDASDLTGPSQTSIVWETM
                     VPSRKRTCVNRLKQSPVEKLTRDLHTILHEQQSYFSGSSEDDLIFNSDTPMVSVEIGH
                     GSVLMRHPNSTTTREEESEASSLSVDNKNEAYSRLTTFPVYNNANKGGNFSSRRVVDT
                     LKKPVIQDHINRDDDEKLQLLMNHNSPLCHIDLKDVINFEEFATHMTNDEQQQLLKYL
                     TYVDTFQGPDSLKNMFNSPQFKENLSAFQKLLTEGVFDLSSPMVKNEDCRTLKKLSLC
                     SATKSDWVEKYNLLQVKDTNCKYDSVGGSIDGELLNAITPSHSVNVKRSRDPHFHPYP
                     GSKPAMKAPKRTLMKASYEHKEHMENDGPGFSPRRLFALPPDNSSLMLDSLRYADENC
                     DQDLLLNVPSNTSFPQAELLRPTSSFAAQASTSSSSIYPYP"
     misc_feature    437..583
                     /gene="LOC139839709"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     Region: ZnF_GATA; cd00202"
                     /db_xref="CDD:238123"
     misc_feature    order(440..442,449..451,506..508,515..517)
                     /gene="LOC139839709"
                     /note="zinc binding site [ion binding]; other site"
                     /db_xref="CDD:238123"
     misc_feature    order(467..472,476..478,506..538)
                     /gene="LOC139839709"
                     /note="DNA-binding region [nucleotide binding]; DNA
                     binding site"
                     /db_xref="CDD:238123"
     misc_feature    1307..>1537
                     /gene="LOC139839709"
                     /note="DEUBAD domain found in nuclear factor related to
                     kappa-B-binding protein (NFRKB) and similar proteins;
                     Region: DEUBAD_NFRKB; cl16477"
                     /db_xref="CDD:472945"
     polyA_site      2382
                     /gene="LOC139839709"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttcaccttc ttttcccaac catttattag attccttcaa ataagtcttt tatttttctt
       61 cttcgatttg tttaatatta ttattattat gaagatgctt tatgttctta tgaaacaaca
      121 ataacccatc taattttctt gttaaagtta tattttgtat aaaaattaaa agaatttgta
      181 tatggggttt tgaggaaatt aaactttttt tcttgtgggt tttatttttt gggggatttg
      241 tagaaatttt cttgataatt gttgtatacc cagttgaatt tttattaata ttttttctgg
      301 gttgtatttt ttgttgaaaa atgacttttc tttgataaga aatagttcat tatttttttt
      361 ttccaatttg gtattattat ttttcagttt gtatattttt agagaaaata aattgtctga
      421 gatgggaaag caaggacctt gctatcactg tggtgttaca agcaccccgt tatggcgaaa
      481 cgggcctcca gacaagcccg ttttgtgcaa cgcgtgtgga tcacgttgga gaactaaagg
      541 gtcacttgta aactacactc cacttcattc tagagccgaa ccggatgatc ttgtagatca
      601 tcgcgttgtt tctagagtaa aaaccatatc cgttaagaac aaagagccca aagtactaaa
      661 acggaaacat aattgtgaca atgtagtggg cggccccact agcattatgc tcgatcgtaa
      721 tactatggtt gcatatgacc agcacaacca aggttttcgc aaaatgtttg acgaagatta
      781 tagtaatagg tctagttctg gctcggctat atctaactct gatggttata tgccacctgg
      841 cagtggcgat gctagtgatt tgacaggtcc gtcgcagacc tctattgtgt gggaaacaat
      901 ggtaccttca cgaaaaagga cgtgtgttaa tcgactaaag caatcgccag ttgagaagct
      961 aactagggac ttacatacaa tcttgcatga acaacagtcg tatttttcgg gatcatcaga
     1021 ggatgatttg atctttaata gtgatacacc gatggtttcg gttgaaattg gacacgggag
     1081 tgtacttatg cgccatccaa actcgacaac cactcgagaa gaagaatctg aagcaagttc
     1141 tctttctgtt gataataaaa acgaggctta ttcacgttta accacctttc ctgtatataa
     1201 taatgctaac aagggtggaa atttctcgag ccgacgggtt gttgatactc tcaaaaagcc
     1261 agttattcaa gatcatatta atagggatga tgacgaaaag ttacagctac ttatgaacca
     1321 taattctcca ttgtgccaca ttgatttaaa agatgttatc aactttgaag agtttgcaac
     1381 tcatatgaca aacgatgaac aacaacaact tctaaagtat ttaacttatg ttgacacttt
     1441 tcaaggccct gatagcctga aaaacatgtt taatagtcct cagtttaagg aaaacctatc
     1501 agcgttccag aaacttctca ctgaaggggt gtttgatctt tcgtcaccaa tggtgaaaaa
     1561 tgaagactgt agaacgttga agaagctttc tctttgtagt gctacaaaat ctgattgggt
     1621 ggagaaatat aatctgcttc aggtcaagga tacaaattgt aaatatgata gtgttggagg
     1681 atctatagat ggtgaattac tcaatgccat aacacctagc cattcagtaa acgtaaaacg
     1741 atcccgagat ccccattttc atccatatcc aggatcaaag cctgcaatga aggctcccaa
     1801 gagaacattg atgaaggcga gctatgaaca caaggagcat atggaaaacg atggcccggg
     1861 attcagtcca aggagactgt ttgcgttacc acctgataat agctcattga tgctcgattc
     1921 attgagatat gcagatgaaa actgtgatca agatttgttg ctaaacgtgc catcaaatac
     1981 atcgttccct caagcagaac tactcagacc aacttcaagt tttgcagccc aagcaagtac
     2041 cagtagtagc tctatatatc cgtacccgta gctgattcat atatccaaac tatgtgggac
     2101 cctcacaaac tagtcgaaaa ctctataggg ttatgtaggt gactattcta ctataataac
     2161 ctataccaaa ccattgtaaa ctttgtagcc atgacttgct actgtggctt tgttggttgc
     2221 atttgcacat gaccttacgt tttggttcag tgcattttgc atttcataca tttagtctgc
     2281 aaattaaggt ttgatggttg cttttttttt cgggttctat ttgtacgtcc ggaccaaaga
     2341 ttgtgttata taaaatctta gaaacggaag aggtggttat ca
//
LOCUS       XM_071829848             656 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MET1,
            chloroplastic-like (LOC139839710), mRNA.
ACCESSION   XM_071829848
VERSION     XM_071829848.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..656
                     /gene="LOC139839710"
                     /note="protein MET1, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139839710"
     CDS             254..598
                     /gene="LOC139839710"
                     /codon_start=1
                     /product="protein MET1, chloroplastic-like"
                     /protein_id="XP_071685949.1"
                     /db_xref="GeneID:139839710"
                     /translation="MEEASKLTEKEIIRAERNSGIVSGELREIQIQNYLRKKEQKETR
                     ERELREGLQLYKSGKYEEALEKFESVLGSKLEINEASVASYNVACCYSKLNQIQAGLS
                     ALKDALQLDFLL"
     misc_feature    380..>580
                     /gene="LOC139839710"
                     /note="LOW PSII ACCUMULATION1; Provisional; Region: LPA1;
                     PLN03098"
                     /db_xref="CDD:215573"
     misc_feature    395..475
                     /gene="LOC139839710"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    488..583
                     /gene="LOC139839710"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     polyA_site      656
                     /gene="LOC139839710"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caccatacct acgacccata ccttcaagtc atccacctta ccttcaatcc atatcttcac
       61 ttttccctta ctttctacca aacaacaatt gaagcaattt agggttggtg tctttctcac
      121 ctggcgtgta tttcttaatc cacatcgaca tctacaaatt agggttttac cattttttgt
      181 tgttttgaag gttgatgtgc atcagttgtg gttgtttgtt tggcaggatc tggtgcgttg
      241 tggacaagtg aatatggaag aagcaagtaa gctaaccgaa aaggagatca ttcgggctga
      301 gagaaattct ggaattgtta gcggtgaact tagggaaatt cagatacaaa attacttgag
      361 gaagaaagaa caaaaggaaa ctcgagaaag ggagcttcgt gaaggcttgc agctatacaa
      421 gagtggaaag tatgaagaag cattggaaaa gtttgagtcg gttttggggt caaaactaga
      481 gattaatgaa gcttcggtgg caagttacaa cgttgcatgc tgctattcta agctaaatca
      541 gatacaagcc ggactttctg ctttaaaaga tgctttgcaa ttggactttc tgctttaatt
      601 tgaggacccg ggaactgttg aaaagtggat gtacacacgc aacaacaaca acaaaa
//
LOCUS       XM_071829849            1415 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYBS3-like (LOC139839712), mRNA.
ACCESSION   XM_071829849
VERSION     XM_071829849.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1415
                     /gene="LOC139839712"
                     /note="transcription factor MYBS3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139839712"
     CDS             220..1278
                     /gene="LOC139839712"
                     /codon_start=1
                     /product="transcription factor MYBS3-like"
                     /protein_id="XP_071685950.1"
                     /db_xref="GeneID:139839712"
                     /translation="MTRRCSHCSNNGHNSRTCPNRGVKLFGVRITDGSIRKSASMGNL
                     SHYTGSGSSSNFLNGFSGGGGGNDLDSPGDTPDHNAAADGYGSEDFVAGSSSGRERKK
                     GVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVITRTPTQVASHAQKYFIRQTNMSRRK
                     RRSSLFDIVADDSPDTQMISNDYPAGNPSQLEALSINNPLTIPTTLEEEECESMDSAN
                     SSTVDLHNDPLNAPSNLEGSQCLYPVMVPAYIPQLIPVIPYWPGLMSGQDQSSSGKTE
                     THEVLKPTAVHSKSPINVDDLVGMSKLTLGESIGDGAPTSLKLVGGGLSRQSAFHENN
                     PGPRTSKIDSNHNPIHAL"
     misc_feature    520..678
                     /gene="LOC139839712"
                     /note="myb-like DNA-binding domain, SHAQKYF class; Region:
                     myb_SHAQKYF; TIGR01557"
                     /db_xref="CDD:130620"
     misc_feature    order(535..537,628..633,637..642,646..654,658..666)
                     /gene="LOC139839712"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     polyA_site      1415
                     /gene="LOC139839712"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgacacttg atttaatcca tccaaaattt taataatatt ccatcaccaa cgtcacccca
       61 aatccaaatc cctaattacc taatccaaat ttccttgatt cacaacttcc cctttttaaa
      121 ttaaacacca ccaattataa accctaacct tttatatcta tctgcaatcg atcaattgga
      181 agcacacaag tgattaatct atcgatcaat taataaatca tgaccaggcg atgttctcat
      241 tgcagcaaca atggtcataa ttctagaaca tgccctaatc gtggtgttaa gttatttggg
      301 gtccggatta ctgatgggtc gattcgaaag agtgctagta tgggtaactt gagtcattat
      361 actggatccg gtagcagcag caactttttg aatggctttt ccggcggtgg tggtggtaat
      421 gatcttgatt cgccgggtga tacgccggat cataacgccg ctgcagacgg gtacgggtcg
      481 gaggactttg ttgccgggtc gtcttctggc cgtgaaagga aaaaaggtgt accatggaca
      541 gaggaagaac ataggatgtt tctattaggt ttacaaaagc ttggaaaagg cgattggcga
      601 ggtatagcaa gaaactatgt aattacaaga acaccaactc aagttgcaag tcatgcccaa
      661 aaatatttta tcagacaaac caatatgtct aggagaaaga gacggtccag cctcttcgat
      721 attgttgctg atgattcccc agatacacaa atgatttcca atgattaccc tgctgggaac
      781 ccatcacaat tagaggctct atccatcaac aacccattga ccataccgac aacattagag
      841 gaagaagaat gcgagtcaat ggattctgca aactcgagta cagttgatct acacaacgac
      901 ccattaaacg caccgtcaaa tcttgagggt tcacaatgct tgtatccggt tatggtccca
      961 gcatacatac ctcaacttat acctgttatc ccgtattggc ctggactaat gtcgggtcaa
     1021 gatcaatctt catcaggcaa aacagagacg catgaagtac ttaagccaac agctgttcat
     1081 tcaaagagcc caattaacgt ggatgatctt gtcgggatgt caaagctaac attaggggaa
     1141 tcaattggtg atggtgcacc gacatcactg aaactagttg gtggtggact gagtcggcaa
     1201 tctgcatttc atgagaataa tcctggtccg agaacatcta agatcgattc gaaccacaat
     1261 cctatccatg cactctagaa ggtaaaaaaa ggaattcagt gtctattaaa aaaggttatg
     1321 ttgtaggttt ttaggtttgt ttgcaagtag gtaccagatc agaaatcaat ctgtatacaa
     1381 gataataaat cttagcctgt ggtgtgggtt ttttt
//
LOCUS       XM_071829850            1876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyol transporter 5-like
            (LOC139839713), mRNA.
ACCESSION   XM_071829850
VERSION     XM_071829850.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1876
                     /gene="LOC139839713"
                     /note="polyol transporter 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 54
                     Proteins"
                     /db_xref="GeneID:139839713"
     CDS             104..1675
                     /gene="LOC139839713"
                     /codon_start=1
                     /product="polyol transporter 5-like"
                     /protein_id="XP_071685951.1"
                     /db_xref="GeneID:139839713"
                     /translation="MADQKPEENGVSGKTKELMADFDPPKPPKRNKYAFACAMLASMT
                     SVLLGYDIGVMSGAQIFIQKDLKLGDGQIEILVGILNLYSLVGSAAAGRTSDWIGRRY
                     TIVLAGAIFFVGAILMGFATNYAFLMVGRFVAGIGVGYALMIAPVYTAEVSPASARGF
                     LTSFPEVFINAGILLGYVSDYAFSKLPLHLGWRFMLGIGAIPSVFLALGVLGMPESPR
                     WLVMQGRLGDAKIVLDKTSDSLEESKLRLADIKHAAGIPEDCNDDIVQVSKRSKGQGV
                     WKELLIHPTPTVRHILMAGIGIHFFQQASGIDAVVLYSPRIFEKAGIVADTPKLLATI
                     AVGFVKTIFILVATFFLDKVGRRPLLLSSVAGMILSLVGLGIGLSIIDHSDHKIHWAV
                     ALCIATILSYVAFFSIGMGPITWVYSSEIFPLKLRAQGCSMGVAMNRVVSGVIGMTFL
                     SLYDAITIGGAFFLFAGIAVVAFVFFYTLFPETQGKNLEEVEQVFGTFFRWRSRQAEL
                     DMKKEAEMITNKSLN"
     misc_feature    221..1576
                     /gene="LOC139839713"
                     /note="Plant Polyol transporter family of the Major
                     Facilitator Superfamily of transporters; Region: MFS_PLT;
                     cd17437"
                     /db_xref="CDD:340995"
     misc_feature    order(245..247,257..259,599..601,608..613,620..622,
                     1007..1012,1022..1027,1034..1039,1121..1123,1319..1324,
                     1331..1336,1346..1348,1415..1420,1427..1429)
                     /gene="LOC139839713"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:340995"
     polyA_site      1876
                     /gene="LOC139839713"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacccttgct acacctctac taaaataaca aacgttgtat acaatttcat gccttgtaac
       61 taatcattct atctccttct cccttcgctg ccacgtcacc accatggctg accagaagcc
      121 cgaagaaaat ggtgtttccg gtaaaaccaa agaactcatg gccgactttg atccaccaaa
      181 accacctaag aggaacaagt acgctttcgc ttgtgccatg ttggcttcca tgacttcagt
      241 cctgcttggc tacgatattg gtgtgatgag tggggcgcaa atcttcatcc aaaaagattt
      301 aaaactagga gacggtcaaa tcgagattct agttggtata ttgaatttat actcgttggt
      361 ggggtccgca gctgcggggc gaacatctga ctggattggg cgtcgttaca ccatcgtgtt
      421 agctggtgct atattcttcg tcggagcaat attaatggga tttgctacta actatgcgtt
      481 tcttatggtt ggtcgttttg ttgccggtat cggtgttggt tatgcactta tgattgcccc
      541 ggtgtatact gctgaggtgt caccagcgtc agctcgtggc ttcctcactt cttttcctga
      601 agtcttcatt aatgccggaa tattgcttgg gtatgtatcc gattacgcgt tctcaaagct
      661 accacttcac ttaggatggc ggttcatgtt gggtatcgga gccatccctt cagtgttcct
      721 agccttgggc gtcctaggca tgcccgagtc acctcgttgg ctcgttatgc agggtcgact
      781 tggtgacgct aagatcgtcc ttgataaaac ctccgatagt ttagaagagt ctaaacttcg
      841 attagccgat atcaaacatg ctgcgggtat accagaagac tgtaatgatg acatcgttca
      901 agtgtcaaaa cgaagcaagg gtcaaggagt atggaaggag ttgttgattc atccaacgcc
      961 tacggttcgc cacattttga tggcgggtat tggcatccat ttcttccaac aagcgagtgg
     1021 gatcgatgct gttgtgttgt atagtccgag gatctttgag aaggctggca ttgttgcaga
     1081 cacaccgaaa ttactagcga ctatagcggt tgggttcgtg aaaactatct ttattttagt
     1141 ggcgacgttt tttcttgata aagtgggacg tcgaccgctt ttattgtcta gtgtagccgg
     1201 gatgatttta tcgttagtgg ggcttgggat cgggttaagt atcatagatc attctgatca
     1261 taagattcat tgggctgtag cactttgtat tgctacgatt ttgtcgtatg tggcgttttt
     1321 ttcgattggg atgggcccga tcacatgggt ctacagctca gagatttttc ctctgaagct
     1381 gcgggcccag gggtgtagta tgggagtggc aatgaatagg gtggtgagtg gggttatcgg
     1441 aatgacgttc ttatccctct acgatgcaat tacgattggt ggtgccttct ttttatttgc
     1501 gggtatcgcg gttgtagcgt ttgtgttctt ttacacattg ttccccgaaa cgcaaggtaa
     1561 gaacttggag gaagttgagc aagttttcgg tacgtttttt aggtggaggt caagacaagc
     1621 agaactggat atgaaaaaag aggctgaaat gataaccaat aagtctctaa attaagtgaa
     1681 gttttaaggc ttagaaatcg gatgataaag tgtgcgtaaa aattctattt tgtggagggt
     1741 atttcgataa tttactcgtc cgtagaagtt tgtattggct agaagaaaaa tgtttatata
     1801 cttgaattgc ataagttttt atagctctat gaagaaacaa atcatgggaa taatataata
     1861 taggttttaa agtaaa
//
LOCUS       XM_071829851            1813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyol transporter 5-like
            (LOC139839714), mRNA.
ACCESSION   XM_071829851
VERSION     XM_071829851.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1813
                     /gene="LOC139839714"
                     /note="polyol transporter 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 49
                     Proteins"
                     /db_xref="GeneID:139839714"
     CDS             129..1700
                     /gene="LOC139839714"
                     /codon_start=1
                     /product="polyol transporter 5-like"
                     /protein_id="XP_071685952.1"
                     /db_xref="GeneID:139839714"
                     /translation="MADRKPEENGVSGKTKELMADFDPPKPHKRNKYAFACAMLASMT
                     SILLGYDVGVMTGAQIFIQKDLKLGDGQIEILVGIINLYSLVGSAVAGRTSDWIGRRY
                     TIVLAGAIFFVGAILMGFATNYAFLMVGRFVAGIGVGYALMIAPVYTAEVSPASARGF
                     LTSFPEVFINAGLLLGYVSDYAFSKLPLHLGWRFMLGVGAIPSVFLALGVLGMPESPR
                     WLVMQGRLAEAKVVLDKTSDSLEESKLRLADIKEAAGIPEDCNDDIVQVSKQSKGRGV
                     WKELLIHPTPTVRHILMAGIGIHFFQQASGIDAVVLYSPRIFEKAGIVADTPKLLATI
                     AVGFVKTIFILIATFFLDKVGRRPLLLSSVAGMILSLVGLGVGLTIVDHSDHKINWAV
                     ALCIATILSFVASFSIGMGPIAWVYSSEIFPLKLRAQGCSMGVAMNRVVSGVIGMTFI
                     SLYDAITIGGAFFLFSSIAVIAFVFFYTLFPETQGKNLEEVEQVFGTFFRWRSRQAEL
                     DREKEAEIITNKSLY"
     misc_feature    246..1601
                     /gene="LOC139839714"
                     /note="Plant Polyol transporter family of the Major
                     Facilitator Superfamily of transporters; Region: MFS_PLT;
                     cd17437"
                     /db_xref="CDD:340995"
     misc_feature    order(270..272,282..284,624..626,633..638,645..647,
                     1032..1037,1047..1052,1059..1064,1146..1148,1344..1349,
                     1356..1361,1371..1373,1440..1445,1452..1454)
                     /gene="LOC139839714"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:340995"
     polyA_site      1813
                     /gene="LOC139839714"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atctacatta ccttactaca actctactac aaatattata ctataaccca cgttatacac
       61 aatttcatgc cttgtaagtt gtaactaatc attctatctc atccttcctt cgccgccacg
      121 tcaccaccat ggctgaccgg aagcccgaag aaaatggtgt ttccggtaaa accaaagaac
      181 tcatggccga ctttgatcca ccaaaaccac ataagaggaa caagtacgct tttgcttgtg
      241 ccatgttggc ttccatgact tccatcctgc ttggctacga tgttggtgtg atgactgggg
      301 cgcaaatctt catccaaaaa gatctaaaac taggagacgg tcaaatcgag attctagttg
      361 gtataataaa tttatactcg ttggtggggt ccgcagttgc tgggcgaaca tctgactgga
      421 ttgggcgtcg gtacaccatc gtgttagctg gtgccatatt tttcgttgga gccatattaa
      481 tgggatttgc tactaactac gcatttctta tggttggtcg ttttgttgcc ggtatcggtg
      541 ttggttatgc acttatgatt gcgccagtct atactgctga ggtgtcacct gcatcagcgc
      601 gtggcttcct cacttctttt cctgaagtct tcattaatgc tggattattg cttgggtatg
      661 tatccgatta cgcgttctca aagctaccac ttcacttagg atggcgattc atgttgggtg
      721 tcggagccat cccttcggtg ttcctagcct tgggggtcct aggcatgccc gagtcacctc
      781 gttggctagt tatgcagggt cgacttgctg aagctaaagt cgtccttgat aaaacctctg
      841 atagtttaga ggagtctaag cttcgattag cggatatcaa agaagctgca ggtataccag
      901 aagactgtaa cgatgacatc gttcaagtgt cgaaacaaag caagggtcgc ggagtatgga
      961 aggagttgtt gattcatcca acgcctacag ttcgccacat cttgatggcg ggcattggca
     1021 tccatttctt ccaacaagcg agcggaatag acgcagttgt gttgtacagt ccgagaatct
     1081 ttgagaaggc tggcattgtt gcggacacac cgaaattact agcgactata gccgttgggt
     1141 tcgtgaaaac gatctttatt ttaattgcga cgttttttct tgataaagtg ggacgtcgac
     1201 cacttttatt gtctagtgta gccgggatga ttttgtcgct agtggggctt ggggtcgggc
     1261 taactattgt cgatcattct gatcacaaga taaattgggc tgtagccctt tgtattgcca
     1321 caatattgtc gtttgtggcg tctttttcga tcgggatggg cccgatcgcc tgggtctaca
     1381 gctcggagat ttttcctttg aaactgcggg cccaagggtg tagtatgggg gtggcaatga
     1441 atagggtggt gagtggggtt atcggaatga catttatatc cctctacgat gcaattacga
     1501 ttggtggcgc cttctttttg ttttcgagta tcgcagtaat tgcgtttgtg ttcttttaca
     1561 cattgtttcc ggaaacgcaa ggtaaaaact tggaggaagt tgagcaagtt ttcgggacgt
     1621 tttttaggtg gaggtcaaga caagctgaat tggataggga aaaagaggct gaaataataa
     1681 ccaataagtc tctatattaa gttaacttag aaatgggatg gtaaaatgta tgcaaaattt
     1741 ccatttcgcg gagggtattt gatcatttac ttgtccgtag atgtttgttg gctagatgaa
     1801 aaatgtttat ata
//
LOCUS       XM_071829853            1084 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent Clp protease
            proteolytic subunit 6, chloroplastic (LOC139839715), mRNA.
ACCESSION   XM_071829853
VERSION     XM_071829853.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1084
                     /gene="LOC139839715"
                     /note="ATP-dependent Clp protease proteolytic subunit 6,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139839715"
     CDS             25..894
                     /gene="LOC139839715"
                     /codon_start=1
                     /product="ATP-dependent Clp protease proteolytic subunit
                     6, chloroplastic"
                     /protein_id="XP_071685954.1"
                     /db_xref="GeneID:139839715"
                     /translation="MCKTRSKTITIIMAASALSTSFTFSNVSQHKQFSSTSLFSQRSS
                     KLKSIVCVLPSPYGDLSNIGLSSKAQNFELTHEDMNLLTPITSSYSPVIARRGAPPPI
                     MPAVMTPGGPLDLSTVLFRNRIIFVGQPINSQVAQRVISQLVTLATIDENADILVYVN
                     CPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASEGALLLAGGEKGMRYAMPNARIMIH
                     QPQSGCGGHVEDVRRQVNEAVQSRHKIDLMYSAFTGQPLEKVQQYTERDRFLSVSEAL
                     EFGLIDGILETEY"
     misc_feature    364..885
                     /gene="LOC139839715"
                     /note="Clp protease; Region: CLP_protease; pfam00574"
                     /db_xref="CDD:425759"
     misc_feature    order(400..402,406..408,433..438,445..450,457..459,
                     502..504,523..525,535..537,544..546,553..558,568..570,
                     592..594,658..660,664..666,682..693,733..735,742..744,
                     748..750,754..756,823..825,829..831)
                     /gene="LOC139839715"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:132928"
     misc_feature    order(601..603,676..678,823..825)
                     /gene="LOC139839715"
                     /note="active site residues [active]"
                     /db_xref="CDD:132928"
     polyA_site      1084
                     /gene="LOC139839715"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcccctatct gttctctcct tttcatgtgc aaaacccgaa gcaaaacaat aacaataata
       61 atggcagctt ccgccctatc aacgtccttc accttctcca atgtttctca acacaaacag
      121 ttttcttcta cctcactttt ttctcaaaga agctcaaagt tgaaatcaat agtctgtgtg
      181 ctaccgagtc cgtatggtga tttatctaac atcgggttat cgagtaaagc acaaaacttt
      241 gagttaacac atgaggatat gaacttactc actcctatta cttcaagtta cagtccagtt
      301 atagctagaa gaggggctcc tccacctatt atgccagctg tcatgactcc agggggacct
      361 ttggatcttt ctaccgtatt attcaggaat cgtatcattt ttgttggcca accaatcaat
      421 tcacaagtag ctcagcgagt tatatcacag cttgttacat tggccacaat agacgagaat
      481 gcagatatac tggtgtatgt gaactgtcct ggtgggagca cctattctgt gttagcaatt
      541 tatgattgca tgtcttggat aaaacctaaa gttggcacag tatgttttgg agttgctgca
      601 agtgaagggg cacttcttct tgctggtgga gagaagggca tgcgatatgc aatgccaaat
      661 gcacgtatta tgatacatca accccaaagt ggatgtgggg gtcatgttga ggatgtaagg
      721 cgtcaagtta acgaagctgt tcagtctcgc cataaaattg acttgatgta ttccgcattt
      781 actggtcaac cactggagaa ggtgcaacaa tacacagaga gggaccgttt cttatctgtt
      841 tccgaggctt tggaatttgg actcattgat ggaatactcg aaactgaata ctaaattgat
      901 taatcttaca attatccgtg gaacattaat agatgattag gaagatgtca ctttggtgat
      961 ttggcaaatg gtatgtctgc aagttgaaag tcctgtacca tttatgaaag cttgattcaa
     1021 gaagatattt atccactcaa acatttgtaa tttgttatat ctagtggagc cttctttctt
     1081 attt
//
LOCUS       XM_071829854            1123 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcineurin B-like protein 9
            (LOC139839716), mRNA.
ACCESSION   XM_071829854
VERSION     XM_071829854.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1123
                     /gene="LOC139839716"
                     /note="calcineurin B-like protein 9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 62
                     Proteins"
                     /db_xref="GeneID:139839716"
     CDS             224..865
                     /gene="LOC139839716"
                     /codon_start=1
                     /product="calcineurin B-like protein 9"
                     /protein_id="XP_071685955.1"
                     /db_xref="GeneID:139839716"
                     /translation="MGCFNSKVRKPVPGHENPTILASQTAFSVSEVEALFELFKSISS
                     SVIDDGLINKEEFQLALFKNRKKENLFANRIFDLFDVKQKGVIDFGDFVRALNVFHPN
                     ASQEDKISFCFKLYDMDGTGFIERQEVKQMLIALLCESELKLADDTIEIILDKTFSEA
                     DVDQDGKIDKSEWHNFVTQNPSLLKIMTLPYLRDITTTFPSFVFNSEVEEIAT"
     misc_feature    368..760
                     /gene="LOC139839716"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; Region: FRQ1; COG5126"
                     /db_xref="CDD:444056"
     polyA_site      1123
                     /gene="LOC139839716"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtgtttctt tcagacaaat tccgtaaaat tctaattttt gctcgattaa accctaatca
       61 ataaaaacac acatacactg taactacttt gtaaccctaa atttttttgc tttctgatag
      121 ttttcaacca taatcgggtc ggatcttcga attcttctgt tacggtctag atggttttta
      181 tataagatga gagtgttgtg acgctgttac acttcctgtt taaatgggct gctttaattc
      241 taaagtaagg aaaccggttc ctgggcatga aaatccgact attcttgcat ctcaaacggc
      301 atttagtgtc agtgaagttg aggctttatt tgagttattc aagagcatca gtagctctgt
      361 aatcgacgat ggattaatta ataaggaaga atttcaacta gctctgttca agaatagaaa
      421 gaaagagaat ctctttgcaa acaggatatt tgatcttttt gatgtcaagc agaagggggt
      481 tattgatttc ggtgactttg ttagagcact taatgttttc catcctaatg cctctcaaga
      541 agacaaaatt agcttttgct tcaagcttta tgatatggac ggaactggat tcatagaacg
      601 ccaggaggtt aagcaaatgt tgattgcact tttatgcgag tctgagctga agctggctga
      661 tgataccatt gagataatcc ttgataaaac gttttctgaa gcggatgttg accaggatgg
      721 gaaaatagac aaatcagaat ggcacaattt tgtcacacaa aatccgtctt tgctcaagat
      781 aatgactctc ccatatctaa gggatattac aaccaccttt ccaagttttg tgttcaattc
      841 tgaagtggag gagatcgcta catgagaatg aatttttaga atgtgaagta gtagtgttgt
      901 tgactgattt tgttctcgga gcatttcatg ttttgaagat cgactagact tgtgagttgc
      961 gccttcttat cacttatggt ggcctggttt tggtttggct ttcttaagga gaaacattat
     1021 taaggattgc aactctttta gtaacatttt tccattttac atttgtgtca aatcgatcgg
     1081 tgtttcagaa gatattgatt tggtatgatt cgatatttat aaa
//
LOCUS       XM_071829855            2027 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAD-capped RNA hydrolase
            DXO1 (LOC139839717), mRNA.
ACCESSION   XM_071829855
VERSION     XM_071829855.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2027
                     /gene="LOC139839717"
                     /note="NAD-capped RNA hydrolase DXO1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839717"
     CDS             58..1677
                     /gene="LOC139839717"
                     /codon_start=1
                     /product="NAD-capped RNA hydrolase DXO1"
                     /protein_id="XP_071685956.1"
                     /db_xref="GeneID:139839717"
                     /translation="MDYSEQEVDLFGDLDLENEETNNSNKKEEQSSSGTSSSSAAASS
                     SSSSSDSSSNRSSGGSGSDSSGGGGGAGGDVDVDEDNGEVRSRYYNNHNSVQEEHEQI
                     FGYTEDDDDYNVIEEDKDLFGSDNEEYVKTQISSPFPVPVLPQPPPRNTNHNPNRGGY
                     GGRGRWQNDRGGAGILPRPGPIPQRQNYGYGSKFYAPRNDERFVSELKFSKSEETLSR
                     KCIAFQEPSEFGCYSRVEGGEVYFDDSSLRLFKRLITEDIGADLNQGFDTFIEKKDLG
                     SQGFGDLLACIRNKNIPLQNMHFVTYRNNLNKIMATAYLRHEPWEMGVHKRKGVVYLD
                     VHKLPERPRSERDRRMSYWGYCFETLATEDPTRDDGEGIHHVDANVEYCAVIKTKLGA
                     HRILMGAEMDCCDSTDDGRRFYVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPY
                     IVIGYRNDAGQLVRTERLRTKDITHRVKMKNYWQGGVCLAFADEVLCWLYGTVKENED
                     YILQFAAPFTRLELLQAQSCPQEITDHVQQL"
     misc_feature    1258..1449
                     /gene="LOC139839717"
                     /note="RAI1 like PD-(D/E)XK nuclease; Region: RAI1;
                     pfam08652"
                     /db_xref="CDD:462550"
ORIGIN      
        1 cacacacaca caaatcgcac ccaaaatctg aataaagttt taatttttat ttttgggatg
       61 gattattcag agcaagaggt ggacttattt ggtgatttgg atttagagaa tgaagaaaca
      121 aataatagta ataaaaagga agaacaatca tcatcaggaa catcatcttc atcagcagca
      181 gcatcatctt cttcttcatc ttcggattca tcttctaatc ggagcagtgg tggtagcggt
      241 agtgatagct ccggtggcgg tggtggtgct ggcggtgatg ttgatgtaga tgaagataac
      301 ggtgaagtta gatcacgtta ttataataat cacaatagtg tgcaagaaga acatgaacaa
      361 atatttgggt atactgaaga tgatgatgat tataatgtta ttgaagaaga taaggatttg
      421 tttgggtctg acaatgaaga atatgttaag acccaaattt ctagcccctt tcctgttcct
      481 gtgttaccac aaccccctcc acgtaataca aaccacaacc cgaaccgagg aggttacggc
      541 gggcgtggtc gttggcaaaa cgatagagga ggagctggca ttcttcctcg gcccggccca
      601 attccacaaa ggcaaaatta tggttacggg tctaagttct atgcgcctcg taacgatgaa
      661 cgttttgttt ctgaacttaa gttttcaaag agtgaagaaa cattatcaag gaaatgcata
      721 gcatttcaag agccgtctga atttggttgc tatagtcggg tggaaggtgg agaagtatac
      781 ttcgatgata gtagtttgcg gcttttcaag cgattaatta cagaagatat tggggctgat
      841 ttgaaccaag gttttgatac ttttattgag aagaaggatt tgggatctca aggctttggt
      901 gatcttctcg cttgcatacg aaacaaaaat attcccttac agaatatgca ctttgttacc
      961 tacagaaata atcttaataa gataatggcc actgcttatt tgaggcacga gccttgggaa
     1021 atgggggtgc ataaaagaaa aggagtcgtg tatctcgatg tacataaatt gcctgaaagg
     1081 ccaagaagcg aacgtgatcg tcgaatgagt tattggggat attgctttga gacacttgca
     1141 actgaagatc caacaagaga tgatggagaa gggatacatc atgttgatgc taatgttgaa
     1201 tattgtgctg taattaaaac caaattaggt gcacatcgta tcctaatggg cgctgaaatg
     1261 gactgttgtg attccactga tgatggaagg agattttacg tcgagttgaa aacaagtcgt
     1321 gagttggatt atcacacgga ggaaagattt gagcgggaga aattgctcaa gttttggatt
     1381 caatcttttc ttgctggtgt cccttatatc gtcattggat ataggaatga tgctgggcaa
     1441 cttgtacgaa cagagagatt aagaaccaaa gatataactc accgggtaaa aatgaaaaat
     1501 tactggcagg gaggagtttg tttggcattt gctgacgagg ttctatgttg gctttatggc
     1561 accgtcaaag agaatgaaga ctatatattg caatttgctg cgccgtttac tcgtttggag
     1621 cttttacaag cacaatcttg ccctcaagaa ataactgatc atgttcagca actataaatt
     1681 tgacagtctt tgtccatttt ggtctttttc tgttaccgaa tcttgagcaa tgtacaactt
     1741 gcaatgcatg aactgcaagt taatattgca ttggatttga ctgtgacaaa aatttaaatt
     1801 gaattaaggc ctttgttgaa atcaaaagca gctttaaggt cttttgttgt atcttttgag
     1861 gcggtaaaaa tacttcgtac tagatatcga taaatgttca gaagccaaaa atggctcctt
     1921 tgagttatgg gattatcgat accaatagtt taacagttct cggaagttta ctattgaata
     1981 tctaatgaca ttttgtttac ctataatgat ctaacctttt gggtttc
//
LOCUS       XM_071829856            1432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 12 (LOC139839718), mRNA.
ACCESSION   XM_071829856
VERSION     XM_071829856.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1432
                     /gene="LOC139839718"
                     /note="probable protein phosphatase 2C 12; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139839718"
     CDS             26..1327
                     /gene="LOC139839718"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 12"
                     /protein_id="XP_071685957.1"
                     /db_xref="GeneID:139839718"
                     /translation="MSSHKGDHQSVPLSVLLKRESANEKIERPDIVSGQANQSKKGED
                     FTFIKSECQRVLGDDVTTYSVFGVLDGHNGSAAAIYTKENLLSNVLRAIPPNLNRNEW
                     IAALPRALVAGFVKTDKDFLEKGQLSGTTVTFVIIEGFIVTVASVGDSRCILESADGS
                     LYYLSADHRFEDNLEETERVTSSGGEVGRLNTGGGQQIGPLRCWPGGLCLSRSIGDLD
                     VGEFIVPVPYVKQVKVSSGGGRLIIASDGVWDAISAEAALDCCRGMPPDAAAGQVVKE
                     AVQPKGLKDDTTCLVVDILPAEKTNPPVPQQKKMAKGVLKVKAMFRKKSTETTSNNGE
                     EYIEPDVVEELLEEGSAKLSERLHTKYPLCNMFKLFSCAVCQVDMKPGEGISVNAGSS
                     CNTKNSRPWDGPFLCSSCQLKREAMEGLNHPPNKRYSSGSE"
     misc_feature    119..907
                     /gene="LOC139839718"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; Region: PP2Cc; cd00143"
                     /db_xref="CDD:238083"
     misc_feature    order(140..142,152..157,233..241,761..763,878..880)
                     /gene="LOC139839718"
                     /note="active site"
                     /db_xref="CDD:238083"
ORIGIN      
        1 ctggatattg gaagggtccg aggaaatgtc ctctcataaa ggtgatcatc aatcggtccc
       61 attatcggtg ttattgaagc gcgaatcagc gaatgagaag attgagagac cggatatagt
      121 tagtggtcaa gcaaaccaat ccaagaaagg agaagatttt acgtttatta aaagtgaatg
      181 ccaacgcgtg ttaggtgatg acgttactac gtattctgta ttcggggtac ttgatggcca
      241 taacgggtct gcagcagcta tatatacgaa agagaacctt ttaagcaacg ttttgcgtgc
      301 tattcctcca aatcttaaca gaaatgaatg gatcgcagcg ttgcctaggg ctttggtagc
      361 cggttttgtg aaaacagata aagattttct agaaaaaggt caactgtcag ggacaactgt
      421 tacttttgta attattgaag gattcattgt tactgtagca tcagttggtg attcgaggtg
      481 tatacttgaa tctgcagatg ggagtctata ttatctatca gcagatcaca gatttgaaga
      541 caatttagaa gagacggagc gtgtgacttc aagtggtggt gaggttggtc gtctgaatac
      601 tggcggtggt caacagattg gtcctttgag atgttggcca ggtggattgt gtctttccag
      661 atctattgga gatctagacg ttggggagtt catagttccc gttccttatg ttaagcaagt
      721 taaggtttct tctggtggtg gaaggctaat aattgcaagc gatggtgtat gggatgctat
      781 atctgcggaa gcggcactag attgctgccg tggtatgccg ccagatgcag cagctggaca
      841 agttgttaaa gaagctgtac aaccgaaagg attgaaggat gatacaacgt gcttggtggt
      901 cgatatttta cctgcagaga aaactaatcc tccggtccca caacaaaaga agatggctaa
      961 gggcgtgtta aaagttaaag ccatgtttag gaaaaagagt acagagacaa cgtctaataa
     1021 tggtgaagaa tatatcgagc cagatgtggt ggaggagctg ctagaagaag gatccgctaa
     1081 actttccgaa aggttgcata caaaatatcc tctttgtaac atgttcaagt tattctcatg
     1141 tgccgtgtgc caagttgata tgaaacccgg ggagggtatt tccgtaaatg cgggatcatc
     1201 atgtaataca aagaattcaa ggccttggga tggtcctttt ctttgctcaa gctgccaact
     1261 aaagagagaa gccatggaag gcttaaatca tcctccaaac aagcgataca gcagcggaag
     1321 cgaataggaa aagctattta tttgatcaca gttataccct gcaagcaatt gcacaactgg
     1381 ttcggagcta agtatatata tggaaagatc agaaggtgtc tttcaacaag tt
//
LOCUS       XM_071829857            1266 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipase
            A1-IIdelta-like (LOC139839719), mRNA.
ACCESSION   XM_071829857
VERSION     XM_071829857.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1266
                     /gene="LOC139839719"
                     /note="phospholipase A1-IIdelta-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839719"
     CDS             1..1266
                     /gene="LOC139839719"
                     /codon_start=1
                     /product="phospholipase A1-IIdelta-like"
                     /protein_id="XP_071685958.1"
                     /db_xref="GeneID:139839719"
                     /translation="MGSKSYDELHGSTNWAGLLDPLDLELRTLLVGYGDLLSATKRVF
                     NNDEGSKYQGYSYYGKTVFFKKAMLPSADSKYQVAYFIYATSPGDAVLSLLSPGMSRD
                     GSEFETNWMGYIAVSNDDYSKSIGRREICMVWRGTARTYEWNQDVFGAMPVSAEPLLP
                     GVDVTGANTPQVMGGWLTIYTTNDPNSELVKSSARTQLTENIKKLLEKYKDEKVSITC
                     TGHSLGACLATLSAFDIAINIVTPDINVSAFIFECPQVRNQSFKDEIEKLRNLKVLRV
                     KNDRDVIPFWPSKIVKWVEEHIWVILPSELLVYVDVGVELWIDSNKSPYLKEENPIDG
                     MLHPMVFHNLQCVLHTLSGWNGKEGEFDWSLMKRSLGLVNLSNDFLKEEYKLPANWWA
                     VTNKGMVLSDDGDWVLSPLDPKDHDLPVY"
     misc_feature    1..1260
                     /gene="LOC139839719"
                     /note="triacylglycerol lipase; Region: PLN02454"
                     /db_xref="CDD:215249"
ORIGIN      
        1 atgggatcaa aatcatacga tgaactccat ggaagcacca attgggctgg ccttcttgac
       61 ccattagacc tcgagctacg tactctactt gtcggctatg gtgatctttt atcagccact
      121 aaaagagtat tcaataacga cgaagggtct aagtaccaag gctacagtta ctatggcaaa
      181 actgtgtttt tcaaaaaagc aatgctccca tccgctgatt ctaaatacca agttgcttac
      241 tttatctacg ccacttctcc tggggacgct gttctgtctc tgctttctcc tggtatgtca
      301 cgtgatggta gcgaatttga gacaaactgg atggggtata tagctgtgtc taatgacgat
      361 tatagtaagt caattggtcg tcgtgaaata tgcatggtgt ggcgtgggac cgctagaact
      421 tacgagtgga atcaagacgt ctttggtgca atgccagtat cagccgagcc actcctccct
      481 ggtgtcgacg taacaggggc taatacacca caagtcatgg gaggatggct tacaatttac
      541 accactaatg acccaaactc tgaactcgtc aaatcaagtg cacgcacaca actcacagaa
      601 aacatcaaga aactacttga aaagtacaaa gatgaaaaag taagcataac atgcacagga
      661 cacagtcttg gtgcatgttt agcaacttta tcggcttttg acatcgccat aaacattgtg
      721 acacctgata taaacgtatc agctttcatt tttgaatgtc cacaagtcag aaatcaatca
      781 ttcaaagatg aaattgaaaa acttcggaac cttaaggtac ttagggttaa gaatgatcgt
      841 gatgtaatcc cattttggcc aagtaagata gtgaaatggg ttgaagaaca catatgggtg
      901 atcctaccaa gtgaattact tgtgtatgtt gatgttggtg ttgaattatg gatcgatagc
      961 aataaatcac cttacttgaa agaggaaaat ccaatagatg gtatgttaca tccaatggtt
     1021 tttcataatt tgcaatgtgt attgcatact ttgagtggtt ggaatgggaa agaaggtgag
     1081 tttgattgga gtttaatgaa gagaagttta gggttggtta atttgtcaaa tgattttttg
     1141 aaagaagagt ataaattacc agcgaattgg tgggctgtaa cgaataaagg aatggtgctt
     1201 agtgatgatg gtgattgggt tttatcacca ttggatccta aagatcacga tcttccggtt
     1261 tactag
//
LOCUS       XM_071829858            1087 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides proteasome subunit alpha
            type-6 (LOC139839720), mRNA.
ACCESSION   XM_071829858
VERSION     XM_071829858.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1087
                     /gene="LOC139839720"
                     /note="proteasome subunit alpha type-6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139839720"
     CDS             100..840
                     /gene="LOC139839720"
                     /codon_start=1
                     /product="proteasome subunit alpha type-6"
                     /protein_id="XP_071685959.1"
                     /db_xref="GeneID:139839720"
                     /translation="MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRG
                     KDSVCVVTQKKVPDKLLDPTSVTHLFPVTKFLGLLATGTTADARTLVQQARNEAAEFR
                     FKYGYEMPVDVLARWIADKSQVYTQHAYMRPLGVVAMVLGIDDENGPRLFKCDPAGHF
                     FGHKATSAGLKEQEAINFLEKKMKNDPEFSYEETVQTAISALQSVLQEDFKANEIEVG
                     VVRKDNPVFHVLSTEEIDEHLTAISERD"
     misc_feature    121..759
                     /gene="LOC139839720"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...; Region:
                     proteasome_alpha_type_6; cd03754"
                     /db_xref="CDD:239723"
     misc_feature    order(130..141,145..150,154..159,169..171,178..180,
                     187..192,199..201,226..228,271..273,277..282,349..357,
                     361..366,457..459,466..468,475..480,487..501,553..555,
                     568..573,577..579,583..588,592..594)
                     /gene="LOC139839720"
                     /note="alpha subunit interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:239723"
     misc_feature    order(208..210,256..258,262..264,301..303,607..609)
                     /gene="LOC139839720"
                     /note="active site"
                     /db_xref="CDD:239723"
ORIGIN      
        1 tagtcttgag aagaaagaaa ggttttgttt ttctattatt attcctaaat aaataaatca
       61 gtcgcaggta aaaattaaat cagtctcctg aaaatcatca tgagccgtgg aagtggaggt
      121 ggatacgatc gtcacattac tatattttca ccggaaggac gtttatttca agtcgaatat
      181 gcttttaaag ctgttaaagc agctggagta acctcaattg gagttcgagg taaagactcg
      241 gtgtgtgtcg tgactcaaaa gaaggttccg gacaagcttt tggatccaac tagcgttaca
      301 catttgtttc cagttactaa gtttcttgga ttgttggcta ctggaactac agctgatgca
      361 aggaccttgg ttcaacaagc aagaaacgaa gctgccgagt tccgttttaa atatggatat
      421 gagatgcctg tcgacgtatt ggctagatgg attgcagaca aatcccaagt ctatactcaa
      481 catgcttaca tgagaccact tggagtagtg gctatggttt tgggtattga tgatgaaaac
      541 ggtcctcgac tcttcaaatg tgatccagca ggccacttct ttggtcataa ggcaacaagt
      601 gctggcttaa aagaacagga ggcaatcaat tttttggaga agaaaatgaa aaatgatcct
      661 gagttctctt acgaggagac agtccagact gcaatttctg ctttgcaatc tgttctacaa
      721 gaagacttca aggccaatga gattgaggtc ggtgttgtgc gaaaggacaa tcccgtattt
      781 catgtgctct ctactgaaga aattgatgag cacttgactg ccatcagcga gcgtgactaa
      841 attctactca tctgagattg ttgctttttt ttttttcatt tcattttatt ggtagaatgt
      901 taatgttatt tggaagtcaa aacaatgctg ttcttgaatc atctgttgtt tttccaaact
      961 ttgtgatggt tgcattggtg atgtagttta ctactgtatt tactatttta ttgtactgct
     1021 agttatatag attgaaatgg gacaatgagg gccatgttaa ctctcatctc ttcatatcta
     1081 tatgttg
//
LOCUS       XR_011757049             506 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839722), ncRNA.
ACCESSION   XR_011757049
VERSION     XR_011757049.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..506
                     /gene="LOC139839722"
                     /note="uncharacterized LOC139839722; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839722"
     ncRNA           1..506
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839722"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839722"
ORIGIN      
        1 aagagttagc atgacccggt atggtggcat caattaattt gtataacctc ataaatgtga
       61 gttatgaggg agcgagatgt agacaatcgt tcttctaatc tagaaataaa gggagtcatt
      121 tcttcaccca agagtaggaa aaagacagcc cttcacccga agtttggtag tgcatgattg
      181 ttatcagtga atcacaatgt tcgtgttcgt ttccaggaac tcaatcgaga agaaccagct
      241 ggttttggtg ggggcccatc tctgagcgtt atatttttga ctcgagggtt gctcttgtag
      301 aaagacgagc tgttgtttgc agggacatct ctggcaatac cgacattgta aaaaaccagg
      361 atgcttcatt caggcatgaa ttccatgaaa ttgtttacat gtcagattca acagatcttt
      421 ttaacatgga ctgtttctag acgtgaaagc ctggtaggag atacttgctg gtttcccaac
      481 ctatttttaa agatatcaat atacag
//
LOCUS       XM_071829859            1517 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycolate oxidase 1-like
            (LOC139839723), transcript variant X1, mRNA.
ACCESSION   XM_071829859
VERSION     XM_071829859.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1517
                     /gene="LOC139839723"
                     /note="glycolate oxidase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 62
                     Proteins"
                     /db_xref="GeneID:139839723"
     CDS             179..1288
                     /gene="LOC139839723"
                     /codon_start=1
                     /product="glycolate oxidase 1-like isoform X1"
                     /protein_id="XP_071685960.1"
                     /db_xref="GeneID:139839723"
                     /translation="MEVTNVTEYQAIAKEKLPKMIYDYYASGAEDQWTLEENRNAFAR
                     ILFRPRILIDVSKIDMTTAILGFKISMPIMIAPTAMQKMAHPEGEYATARAASSAGTI
                     MTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR
                     LGRREADIKNRFTLPPFLTLKNFEGLDLGKMDEASDSGLASYVAGQIDRTLSWKDVKW
                     LQTITTLPILVKGVITAEDTRLAIQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAA
                     QGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVKKVLQMLREEF
                     ELTMALSGCTSLKQITRNHIVTEWDAPLSRPAPRL"
     misc_feature    179..1285
                     /gene="LOC139839723"
                     /note="probable peroxisomal (S)-2-hydroxy-acid oxidase;
                     Region: PLN02493"
                     /db_xref="CDD:166134"
ORIGIN      
        1 ggaaaaaaga cttcaaattc ttgatgtcac ccaccctttt agtctttcat ttttaggaag
       61 atgataatga agaaaaacta tgaaaaacac atttaagcat gtggatgaaa cacacccaaa
      121 tgcctctctt taaatggtat taagattctt gaagggattt ttggaataga caataaagat
      181 ggaggtaacc aatgtgaccg agtatcaggc aatcgccaaa gaaaagttgc ctaaaatgat
      241 ctacgactac tacgcttctg gtgctgaaga ccaatggact ctagaggaga acagaaacgc
      301 ctttgcaaga atcttgttta ggccacgcat tcttattgat gttagcaaaa tagacatgac
      361 taccgcaatt ttaggattca aaatatcgat gcctattatg atcgcgccca cagctatgca
      421 gaaaatggct catcctgaag gggagtatgc aacagcaaga gctgcatcct cagctggaac
      481 tatcatgaca ttgtcttcat gggcaacatc tagtgttgag gaagttgctt cgacaggacc
      541 tggaatccgt ttcttccagc tctacgtgta taaggatagg aatgttgtgg ctcaacttgt
      601 gagaagagcc gaaagagcag gtttcaaggc tattgctctt acggtcgata caccaaggct
      661 tggacgtaga gaagccgaca tcaagaacag attcacttta cctccatttt tgacattgaa
      721 gaactttgag ggtttggacc tcgggaaaat ggatgaggct agtgactccg gtttagcttc
      781 ctatgttgct ggtcagattg accgcacctt gagctggaag gatgtgaagt ggctgcagac
      841 catcaccacc ctgccaatcc tggttaaggg cgtgattact gctgaagaca caaggttggc
      901 aattcaagca ggcgcagcgg gtattatcgt atctaatcat ggagctcgcc aactcgacta
      961 tgtacctgcc accatcatgg ctctagaaga ggttgttaaa gcggcacaag gccgtgttcc
     1021 tgtgttctta gatggtgggg tccgccgtgg gacagatgtt tttaaggctc tggctcttgg
     1081 agcttcaggc atatttatcg ggcggccagt ggtgttttcc ttagctgcag aaggagaagc
     1141 aggagtgaaa aaggtacttc aaatgttacg tgaagaattt gagctaacga tggcgttaag
     1201 tggttgcact tcactcaaac agatcactcg taaccatatt gtgaccgaat gggatgcacc
     1261 tctttctcgt ccagcaccca gattataatc aatcaatata ttcatctaaa tcagaaacgt
     1321 ttatgatttc gatgacaatg taaaaggaat aggactgtgt tacagttgca aaatcattcc
     1381 cgaatgccta tgggaaactc ctatagtttc aaatttattt gttcgtgtat ttcaaatttc
     1441 ctgtttcgga ataataaagt cgcatggata cattacctaa attttgagca tcatttgatt
     1501 ataacgtgat atcacaa
//
LOCUS       XM_071829860            1202 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycolate oxidase 1-like
            (LOC139839723), transcript variant X2, mRNA.
ACCESSION   XM_071829860
VERSION     XM_071829860.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1202
                     /gene="LOC139839723"
                     /note="glycolate oxidase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839723"
     CDS             128..973
                     /gene="LOC139839723"
                     /codon_start=1
                     /product="glycolate oxidase-like isoform X2"
                     /protein_id="XP_071685961.1"
                     /db_xref="GeneID:139839723"
                     /translation="MQQQELHPQLELSWFTLSSWATSSVEEVASTGPGIRFFQLYVYK
                     DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGK
                     MDEASDSGLASYVAGQIDRTLSWKDVKWLQTITTLPILVKGVITAEDTRLAIQAGAAG
                     IIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIF
                     IGRPVVFSLAAEGEAGVKKVLQMLREEFELTMALSGCTSLKQITRNHIVTEWDAPLSR
                     PAPRL"
     misc_feature    <173..970
                     /gene="LOC139839723"
                     /note="glycolate oxidase; Region: PLN02979"
                     /db_xref="CDD:166620"
ORIGIN      
        1 aggccacgca ttcttattga tgttagcaaa atagacatga ctaccgcaat tttaggattc
       61 aaaatatcga tgcctattat gatcgcgccc acagctatgc agaaaatggc tcatcctgaa
      121 ggggagtatg caacagcaag agctgcatcc tcagctggaa ctatcatggt ttacattgtc
      181 ttcatgggca acatctagtg ttgaggaagt tgcttcgaca ggacctggaa tccgtttctt
      241 ccagctctac gtgtataagg ataggaatgt tgtggctcaa cttgtgagaa gagccgaaag
      301 agcaggtttc aaggctattg ctcttacggt cgatacacca aggcttggac gtagagaagc
      361 cgacatcaag aacagattca ctttacctcc atttttgaca ttgaagaact ttgagggttt
      421 ggacctcggg aaaatggatg aggctagtga ctccggttta gcttcctatg ttgctggtca
      481 gattgaccgc accttgagct ggaaggatgt gaagtggctg cagaccatca ccaccctgcc
      541 aatcctggtt aagggcgtga ttactgctga agacacaagg ttggcaattc aagcaggcgc
      601 agcgggtatt atcgtatcta atcatggagc tcgccaactc gactatgtac ctgccaccat
      661 catggctcta gaagaggttg ttaaagcggc acaaggccgt gttcctgtgt tcttagatgg
      721 tggggtccgc cgtgggacag atgtttttaa ggctctggct cttggagctt caggcatatt
      781 tatcgggcgg ccagtggtgt tttccttagc tgcagaagga gaagcaggag tgaaaaaggt
      841 acttcaaatg ttacgtgaag aatttgagct aacgatggcg ttaagtggtt gcacttcact
      901 caaacagatc actcgtaacc atattgtgac cgaatgggat gcacctcttt ctcgtccagc
      961 acccagatta taatcaatca atatattcat ctaaatcaga aacgtttatg atttcgatga
     1021 caatgtaaaa ggaataggac tgtgttacag ttgcaaaatc attcccgaat gcctatggga
     1081 aactcctata gtttcaaatt tatttgttcg tgtatttcaa atttcctgtt tcggaataat
     1141 aaagtcgcat ggatacatta cctaaatttt gagcatcatt tgattataac gtgatatcac
     1201 aa
//
LOCUS       XM_071829862            1046 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides deSI-like protein At4g17486
            (LOC139839724), transcript variant X1, mRNA.
ACCESSION   XM_071829862
VERSION     XM_071829862.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1046
                     /gene="LOC139839724"
                     /note="deSI-like protein At4g17486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139839724"
     CDS             145..873
                     /gene="LOC139839724"
                     /codon_start=1
                     /product="deSI-like protein At4g17486"
                     /protein_id="XP_071685963.1"
                     /db_xref="GeneID:139839724"
                     /translation="MKFITKKGLKSIVPLRLKGKSATRFCLFPKVKAEYGQGNTPVYL
                     NVYDLTPMNGYAYWAGFGIFHSGVELHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRR
                     SIFIGTTCLNPSQVREFMEHHAANYNGDTYHLIAKNCNHFCNDICYKLTGNHIPKWVN
                     RLAKLGSAFSFVLPDALKVSAVQQSPRCLTYENESEKRRLRSNSFSCLASVSSRQKHL
                     STSSLFLQSPLKGCLPLRPRKVNA"
     misc_feature    262..660
                     /gene="LOC139839724"
                     /note="PPPDE putative peptidase domain; Region:
                     Peptidase_C97; pfam05903"
                     /db_xref="CDD:461775"
ORIGIN      
        1 atcgcttcag atcaatacgt acacacttca cgtttctgta tctatatcac cacttatatg
       61 cattgttaaa tcacttctcc aatggcgttc cttttacttc tacactgatg gtatgtaggt
      121 gctgactggc ttctggctgc aaccatgaaa ttcataacaa agaaagggct gaagtccata
      181 gtgccactcc gtttaaaagg gaaatcagcc actcgttttt gtttgttccc aaaagtgaaa
      241 gctgaatatg gacaaggaaa tacacccgtt tatcttaatg tttatgactt gacacccatg
      301 aatggatatg cttactgggc tggctttggc atctttcact ctggcgtaga acttcatggt
      361 gtagaatatg catttggagc tcatgattat ccaacaagtg gtgtctttga agtcgaacca
      421 cgacaatgtc cagggttcaa atttagacgg tcaatattta tagggactac ttgtctgaac
      481 ccttctcagg tgagagagtt catggaacat catgctgcaa actacaacgg tgacacgtat
      541 cacctaatcg caaaaaactg taaccatttc tgcaacgaca tttgctacaa gttgactggc
      601 aaccatatcc ccaaatgggt taatcgactc gctaaactgg gttcagcttt tagctttgtt
      661 ttaccagacg ctcttaaggt gtcagctgta caacagagtc ctcgttgctt aacatacgaa
      721 aatgagagcg aaaaacgaag attgagaagc aatagtttta gttgcctagc atcagtttcg
      781 tcgaggcaga aacacttgtc aacgtcttcg ttatttctgc aatcaccttt gaaagggtgc
      841 ttaccactaa gaccccgaaa ggttaatgcc tagagctatt tttttattta agaaatctcc
      901 taaaaggcgg ttttggtttg atcgttagtt gtgtatgttg taatcaaact atccgaagct
      961 ttaggagaat caatgtgttt atgtcgtagt agtgaggttg cccacaccca ttgttgtttt
     1021 attgcatcat taaatgcgaa acttaa
//
LOCUS       XM_071829863            1006 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides deSI-like protein At4g17486
            (LOC139839724), transcript variant X2, mRNA.
ACCESSION   XM_071829863
VERSION     XM_071829863.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1006
                     /gene="LOC139839724"
                     /note="deSI-like protein At4g17486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139839724"
     CDS             105..833
                     /gene="LOC139839724"
                     /codon_start=1
                     /product="deSI-like protein At4g17486"
                     /protein_id="XP_071685964.1"
                     /db_xref="GeneID:139839724"
                     /translation="MKFITKKGLKSIVPLRLKGKSATRFCLFPKVKAEYGQGNTPVYL
                     NVYDLTPMNGYAYWAGFGIFHSGVELHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRR
                     SIFIGTTCLNPSQVREFMEHHAANYNGDTYHLIAKNCNHFCNDICYKLTGNHIPKWVN
                     RLAKLGSAFSFVLPDALKVSAVQQSPRCLTYENESEKRRLRSNSFSCLASVSSRQKHL
                     STSSLFLQSPLKGCLPLRPRKVNA"
     misc_feature    222..620
                     /gene="LOC139839724"
                     /note="PPPDE putative peptidase domain; Region:
                     Peptidase_C97; pfam05903"
                     /db_xref="CDD:461775"
ORIGIN      
        1 ttcccctttc tattgtgttc tcttaatatg aaattcccaa gtcgctgaaa ttgtgtgttt
       61 atataggatg gtatgtaggt gctgactggc ttctggctgc aaccatgaaa ttcataacaa
      121 agaaagggct gaagtccata gtgccactcc gtttaaaagg gaaatcagcc actcgttttt
      181 gtttgttccc aaaagtgaaa gctgaatatg gacaaggaaa tacacccgtt tatcttaatg
      241 tttatgactt gacacccatg aatggatatg cttactgggc tggctttggc atctttcact
      301 ctggcgtaga acttcatggt gtagaatatg catttggagc tcatgattat ccaacaagtg
      361 gtgtctttga agtcgaacca cgacaatgtc cagggttcaa atttagacgg tcaatattta
      421 tagggactac ttgtctgaac ccttctcagg tgagagagtt catggaacat catgctgcaa
      481 actacaacgg tgacacgtat cacctaatcg caaaaaactg taaccatttc tgcaacgaca
      541 tttgctacaa gttgactggc aaccatatcc ccaaatgggt taatcgactc gctaaactgg
      601 gttcagcttt tagctttgtt ttaccagacg ctcttaaggt gtcagctgta caacagagtc
      661 ctcgttgctt aacatacgaa aatgagagcg aaaaacgaag attgagaagc aatagtttta
      721 gttgcctagc atcagtttcg tcgaggcaga aacacttgtc aacgtcttcg ttatttctgc
      781 aatcaccttt gaaagggtgc ttaccactaa gaccccgaaa ggttaatgcc tagagctatt
      841 tttttattta agaaatctcc taaaaggcgg ttttggtttg atcgttagtt gtgtatgttg
      901 taatcaaact atccgaagct ttaggagaat caatgtgttt atgtcgtagt agtgaggttg
      961 cccacaccca ttgttgtttt attgcatcat taaatgcgaa acttaa
//
LOCUS       XM_071829864            1203 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides deSI-like protein At4g17486
            (LOC139839724), transcript variant X3, mRNA.
ACCESSION   XM_071829864
VERSION     XM_071829864.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1203
                     /gene="LOC139839724"
                     /note="deSI-like protein At4g17486; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139839724"
     CDS             302..1030
                     /gene="LOC139839724"
                     /codon_start=1
                     /product="deSI-like protein At4g17486"
                     /protein_id="XP_071685965.1"
                     /db_xref="GeneID:139839724"
                     /translation="MKFITKKGLKSIVPLRLKGKSATRFCLFPKVKAEYGQGNTPVYL
                     NVYDLTPMNGYAYWAGFGIFHSGVELHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRR
                     SIFIGTTCLNPSQVREFMEHHAANYNGDTYHLIAKNCNHFCNDICYKLTGNHIPKWVN
                     RLAKLGSAFSFVLPDALKVSAVQQSPRCLTYENESEKRRLRSNSFSCLASVSSRQKHL
                     STSSLFLQSPLKGCLPLRPRKVNA"
     misc_feature    419..817
                     /gene="LOC139839724"
                     /note="PPPDE putative peptidase domain; Region:
                     Peptidase_C97; pfam05903"
                     /db_xref="CDD:461775"
ORIGIN      
        1 ggatagaaac cacccaccca atcatttttc acgcacacac gcgtttcctg ttcgggttta
       61 cgcgtttcag ggagttgatc catcaatcca tacgggcatg tgaatcgggt cgagttcctg
      121 cgtacgggac ggtaaaaccc cctcacggac ttttttacgg agccaagggt cgaacccctg
      181 acctccaacc gtgctcaata ctcaaggtat tggggttgaa ccattgggcc acgaaggcgg
      241 ttcctagcat gtctgatgtt gatgatggta tgtaggtgct gactggcttc tggctgcaac
      301 catgaaattc ataacaaaga aagggctgaa gtccatagtg ccactccgtt taaaagggaa
      361 atcagccact cgtttttgtt tgttcccaaa agtgaaagct gaatatggac aaggaaatac
      421 acccgtttat cttaatgttt atgacttgac acccatgaat ggatatgctt actgggctgg
      481 ctttggcatc tttcactctg gcgtagaact tcatggtgta gaatatgcat ttggagctca
      541 tgattatcca acaagtggtg tctttgaagt cgaaccacga caatgtccag ggttcaaatt
      601 tagacggtca atatttatag ggactacttg tctgaaccct tctcaggtga gagagttcat
      661 ggaacatcat gctgcaaact acaacggtga cacgtatcac ctaatcgcaa aaaactgtaa
      721 ccatttctgc aacgacattt gctacaagtt gactggcaac catatcccca aatgggttaa
      781 tcgactcgct aaactgggtt cagcttttag ctttgtttta ccagacgctc ttaaggtgtc
      841 agctgtacaa cagagtcctc gttgcttaac atacgaaaat gagagcgaaa aacgaagatt
      901 gagaagcaat agttttagtt gcctagcatc agtttcgtcg aggcagaaac acttgtcaac
      961 gtcttcgtta tttctgcaat cacctttgaa agggtgctta ccactaagac cccgaaaggt
     1021 taatgcctag agctattttt ttatttaaga aatctcctaa aaggcggttt tggtttgatc
     1081 gttagttgtg tatgttgtaa tcaaactatc cgaagcttta ggagaatcaa tgtgtttatg
     1141 tcgtagtagt gaggttgccc acacccattg ttgttttatt gcatcattaa atgcgaaact
     1201 taa
//
LOCUS       XM_071829865            2487 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glyoxysomal fatty acid
            beta-oxidation multifunctional protein MFP-a-like (LOC139839725),
            mRNA.
ACCESSION   XM_071829865
VERSION     XM_071829865.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2487
                     /gene="LOC139839725"
                     /note="glyoxysomal fatty acid beta-oxidation
                     multifunctional protein MFP-a-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839725"
     CDS             109..2286
                     /gene="LOC139839725"
                     /codon_start=1
                     /product="glyoxysomal fatty acid beta-oxidation
                     multifunctional protein MFP-a-like"
                     /protein_id="XP_071685966.1"
                     /db_xref="GeneID:139839725"
                     /translation="MGGTTTISVGSDGVAIITIINPPVNSLSFDVLISLKESFDQALQ
                     RDDVKAIVVTGAKGKFSGGFDINAFGGMQDGKATSSGPASKPGYVSIEVLSDTVEAAR
                     KPSVAAIDGLALGGGLEVAMACHARVATSTAQLGLPELQLGIIPGFGGTQRLPRLVGL
                     AKALEMMLTSKPVRGSEAVDLGLVDAVVSGDELVDTARRWALDILEGRKPWVASLYRT
                     DKIESLGEAREILNFARAQARRQAPNLQHPQVCINVIEEGIVSGPRVGLMKEYTEFQG
                     LLKSDTCKSLLNIFFAQRGTTKVPGVTDQGLKPRRISKVAILGGGLMGSGIATALILN
                     GYEVLLKEVNQKFLEGGLGRVKANLSSSLKKGKLTQEKFEKTLSRLKGTLDYESFKDV
                     DMVIEAVIENVTLKQQIFSDLEKYCSPNCILASNTSTIDLSLIGEKTNSQDRIIGAHF
                     FSPAHVMPLLEIVRTSKTSPQVIVDLLDVGKKIRKTPVVVGNCTGFAVNWMFFPYTQA
                     ALLLVERGADIYRIDRVITKFGMPMGPFRLCDLVGFGVAIATGSQFVLNFPERTYKSM
                     LIPLMQEDKRAGETTRKGFYMYNDKRKASPDPEIKKYIEKSREISGVSVDPKLAKLSD
                     KDIIEMIFFPVVNEACRVYSEGIAVKAADLDIAGVMGMGFPPYRGGIMFWADMLGSKY
                     VCGRLDEWAKMYGDFFKPCDYLAQRAALGAPLSAPLDQAKSRL"
     misc_feature    109..2247
                     /gene="LOC139839725"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     Region: fadJ; PRK11154"
                     /db_xref="CDD:236864"
     polyA_site      2487
                     /gene="LOC139839725"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttcaccattt catcacatat taaaacctca taattttagt tcaacactca acaacagtcc
       61 caacattttg acaaatcaat tagcaagcaa caaaaaatta tacagaaaat gggaggaaca
      121 acaacgattt cagttggatc tgatggtgtt gctatcatca ctatcatcaa tccaccagtt
      181 aattcacttt cttttgatgt actaattagt ttaaaagaaa gttttgatca agctttacaa
      241 agggacgatg tgaaggcaat tgtcgttaca ggtgcaaagg gtaaattttc tggtggtttt
      301 gacataaatg catttggtgg aatgcaagat ggaaaagcaa cgtcgtcagg accggcatca
      361 aaacctggtt atgtatcaat tgaagttctg tctgatactg ttgaagctgc tagaaaacca
      421 tctgtagctg ctattgatgg gcttgcatta ggtggaggat tagaggttgc aatggcatgt
      481 catgctcgag tagctacttc cactgctcag ttaggcttgc ctgaattgca gctcggtatt
      541 attcctgggt ttggaggaac tcaacggctt ccacgactag ttggtctggc aaaggctctc
      601 gagatgatgt tgacatctaa gcctgttcga ggatcagaag ctgttgatct ggggctcgtg
      661 gatgcagttg tatcaggaga tgagttagta gacactgctc gtcgatgggc gttggatata
      721 ttggaaggta gaaaaccgtg ggttgcaagt ctttacagaa cagataagat agagtctctt
      781 ggcgaggcac gtgaaatact gaactttgcc agagctcaag ctcgtagaca agcacccaat
      841 ctacaacatc cgcaagtttg cattaatgtt attgaagagg gcatagtctc cggcccacgg
      901 gtcgggttaa tgaaggaata tactgaattc caaggtcttt taaagtcgga tacttgcaag
      961 agcttgctta atatcttctt tgctcaacgt ggtactacaa aggtaccagg ggtgaccgat
     1021 cagggtctga agccaagacg gatcagcaag gttgctattc ttggaggtgg tctgatgggg
     1081 tcgggaatag caacggctct aatattaaat ggttatgaag ttctcctgaa agaggtcaat
     1141 caaaagtttc tagagggtgg attaggaaga gtcaaagcta atctatcaag cagccttaag
     1201 aaaggtaagc tgactcaaga aaagtttgag aaaactctat ctcgtctcaa gggtactctt
     1261 gactatgaaa gctttaagga tgttgacatg gtgatagagg ctgttattga gaatgtcaca
     1321 ttgaagcaac aaatattttc ggatttggaa aaatactgct ctcctaattg catacttgca
     1381 agcaacacct caacaattga cttgagtcta atcggcgaga agacaaattc tcaagatagg
     1441 atcattggtg cacacttctt cagcccggct cacgtgatgc ctcttttgga gatagttcgt
     1501 acatcaaaaa catccccaca agtcattgtt gacttattgg atgttggaaa gaagataagg
     1561 aaaactccag ttgtggttgg gaactgcaca gggtttgctg ttaattggat gttcttccct
     1621 tatactcaag ctgctctttt gcttgtagaa cgtggggccg acatttatag gatcgatagg
     1681 gtaattacaa aatttggaat gccaatgggt ccgtttagat tgtgtgatct tgtagggttt
     1741 ggtgttgcaa ttgcaactgg ctcacagttt gttcttaact ttcccgaaag aacgtacaag
     1801 tcaatgctaa ttccacttat gcaagaagat aaaagagctg gtgagacgac tcgtaaaggg
     1861 ttttacatgt acaacgataa gcgcaaagca agcccagatc ctgaaatcaa gaaatacatt
     1921 gagaagtcaa gggaaatatc tggtgtttct gttgatccta agcttgcgaa gttgtcagat
     1981 aaggatatta tagagatgat attcttccct gttgtgaacg aagcttgtcg agtttattcc
     2041 gagggtatcg cagtgaaagc agctgatttg gacattgcgg gtgttatggg gatgggattt
     2101 ccaccttaca gaggagggat tatgttctgg gcagatatgc ttggatcgaa atacgtatgt
     2161 gggaggttgg atgagtgggc gaaaatgtat ggagatttct tcaagccatg tgattactta
     2221 gctcaaagag ctgcacttgg ggcacctttg agtgcgccgt tggatcaagc aaaatcacga
     2281 ttatagatga aaaggaaaat gtctgctggc ggtggttgtg acaaaataat atgcccagat
     2341 taatgagaca ttattataag tatacatata ggtttatgtt tatggtgttt ttactgaatc
     2401 ttaatcttat tatgtcgtgc ttgtaatgac tcccaattat ttgttagaac ttgaatgcac
     2461 tctttgtatg tcaactgttg tttctca
//
LOCUS       XM_071829866            1796 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable plastidic glucose
            transporter 1 (LOC139839726), transcript variant X1, mRNA.
ACCESSION   XM_071829866
VERSION     XM_071829866.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1796
                     /gene="LOC139839726"
                     /note="probable plastidic glucose transporter 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139839726"
     CDS             77..1678
                     /gene="LOC139839726"
                     /codon_start=1
                     /product="probable plastidic glucose transporter 1 isoform
                     X1"
                     /protein_id="XP_071685967.1"
                     /db_xref="GeneID:139839726"
                     /translation="MATTAVAAVYSPRLTPFSGNRTLPTFNPILHANFSTRRSFRVLN
                     LSPLRDFKAYCNKNPQLPELLDSTGNESDVSKEEENDVGWIPAFPHILIASMSNFLFG
                     FHIGVMNGPIVSIAKELGFEGNSILEGLVVSIFIAGAFLGSAGAGYLVDRLGFRRTLQ
                     VDTIPLILGAVLSAQALSLDQLLWGRFLVGLGIGANAVLVPIYISEVGPTKYRGSLGS
                     LCQIGTCTGIIASLFLGIFSENDPHWWRTMLYIASVPGFVLASGMQFAVESPRWLCKA
                     GRLDQAKQVISNLWGPSEVERSIDEFQSVLKNDGGDLDSKWSELLQEPHSRVALIGGT
                     LFVLQQFAGINAVLYFSSLTFKDAGITNGALASLYVGLTNFAGALCSLYLVDKEGRQK
                     LIIGSYLGMAVSMFLVVSAISFPVDGELRNNLSILGTILYMLTYAIGAGPVTGLIIPE
                     LSSSRARGKIMSFSFSVHWVCNFMVGLFFLELIERFGVAPVYGSFGAVSLLAAVFSYS
                     FLVETKGRSLEEIEMSLNPNFTKRD"
     misc_feature    353..1612
                     /gene="LOC139839726"
                     /note="Glucose transporters (GLUTs) and other similar
                     sugar transporters of the Major Facilitator Superfamily;
                     Region: MFS_GLUT_like; cd17315"
                     /db_xref="CDD:340873"
     misc_feature    order(377..379,389..391,737..739,746..751,758..760,
                     1091..1096,1106..1111,1118..1123,1196..1198,1382..1387,
                     1394..1399,1409..1411,1478..1483,1490..1492)
                     /gene="LOC139839726"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:340873"
     polyA_site      1796
                     /gene="LOC139839726"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatagaaagc ttaatgaaat ctaacatgtc actctttctg aatgagaggt acagatgcta
       61 tcattaatct gatccaatgg ccactactgc cgtcgccgcc gtatactccc cgcggttgac
      121 tccattttcc ggcaaccgta cacttccgac attcaatcca atccttcatg ctaacttttc
      181 aactcgccga tcttttcgtg tactcaattt atcaccgttg agagatttca aagcttattg
      241 caacaaaaat ccacagcttc ctgaactact tgattccaca ggaaatgaaa gtgatgtatc
      301 aaaagaagaa gaaaacgacg tcgggtggat acctgcattt cctcatatac ttattgcatc
      361 tatgtcgaat ttccttttcg ggtttcatat cggggtaatg aatgggccaa ttgtatctat
      421 agcaaaagag ctagggtttg aagggaattc gatacttgaa gggcttgtgg tgagcatttt
      481 tattgcaggt gcttttttag gcagtgcagg tgctggttat ctagttgaca gactcgggtt
      541 taggagaacg cttcaagttg atacaatacc gctcattctt ggtgcggttt taagtgcaca
      601 agctctttct ttggatcagt tattgtgggg acggtttctc gtgggtcttg gtattggcgc
      661 aaacgcggtt cttgttccta tttatatatc agaggtcggt ccaacaaaat ataggggttc
      721 tttgggtagt ttgtgtcaaa ttggcacatg tactggtata atagcctcac tttttctagg
      781 aattttctcg gaaaatgatc ctcattggtg gagaacaatg ctctatattg caagtgtacc
      841 tggctttgta ttagcatcgg gtatgcagtt tgctgtagag agcccacgct ggctatgcaa
      901 agctgggagg cttgatcagg cgaaacaagt tatctcaaat ctgtggggac catcagaagt
      961 tgagagaagc atcgatgaat ttcagtctgt tcttaagaac gatggtggtg atttggacag
     1021 caaatggtca gagctactac aggaaccaca ttctagagtt gctttaattg gaggcactct
     1081 gtttgtactg caacaatttg ctggcatcaa tgcagttctt tatttttcct cattgacttt
     1141 taaagatgct ggaatcacaa acggtgcatt ggcgagctta tatgttggac ttacaaattt
     1201 tgcaggtgca ctttgttctt tatacttggt tgataaggaa gggaggcaaa aacttattat
     1261 tggaagttac ctgggaatgg cagtatccat gtttcttgtt gtttctgcta tcagctttcc
     1321 tgtagatgga gagttgcgta acaacttatc tatacttggg acaatcttgt acatgttgac
     1381 ttatgcaatt ggagctggtc cagtaactgg tcttattata cctgagctta gcagcagcag
     1441 ggcacgcggg aaaattatga gcttcagttt ttcagttcac tgggtgtgta atttcatggt
     1501 tggcttattc ttccttgagc tgatagaaag atttggggtt gcaccagttt acgggtcctt
     1561 cggtgcagtt tctttattgg cagctgtatt ctcttattct ttcttagttg aaactaaagg
     1621 gcggtctctt gaagaaatcg aaatgtcact taaccctaac ttcacaaagc gtgattaggg
     1681 atagtttttt cgactttaag aaggaaccaa tatatacgct accactcaat gtatttctaa
     1741 tagtaacacg tttgtatata gttaagcctt caataagata tatgacattt tggcta
//
LOCUS       XM_071829867            1793 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable plastidic glucose
            transporter 1 (LOC139839726), transcript variant X2, mRNA.
ACCESSION   XM_071829867
VERSION     XM_071829867.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1793
                     /gene="LOC139839726"
                     /note="probable plastidic glucose transporter 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139839726"
     CDS             77..1675
                     /gene="LOC139839726"
                     /codon_start=1
                     /product="probable plastidic glucose transporter 1 isoform
                     X2"
                     /protein_id="XP_071685968.1"
                     /db_xref="GeneID:139839726"
                     /translation="MATTAVAAVYSPRLTPFSGNRTLPTFNPILHANFSTRRSFRVLN
                     LSPLRDFKAYCNKNPQLPELLDSRNESDVSKEEENDVGWIPAFPHILIASMSNFLFGF
                     HIGVMNGPIVSIAKELGFEGNSILEGLVVSIFIAGAFLGSAGAGYLVDRLGFRRTLQV
                     DTIPLILGAVLSAQALSLDQLLWGRFLVGLGIGANAVLVPIYISEVGPTKYRGSLGSL
                     CQIGTCTGIIASLFLGIFSENDPHWWRTMLYIASVPGFVLASGMQFAVESPRWLCKAG
                     RLDQAKQVISNLWGPSEVERSIDEFQSVLKNDGGDLDSKWSELLQEPHSRVALIGGTL
                     FVLQQFAGINAVLYFSSLTFKDAGITNGALASLYVGLTNFAGALCSLYLVDKEGRQKL
                     IIGSYLGMAVSMFLVVSAISFPVDGELRNNLSILGTILYMLTYAIGAGPVTGLIIPEL
                     SSSRARGKIMSFSFSVHWVCNFMVGLFFLELIERFGVAPVYGSFGAVSLLAAVFSYSF
                     LVETKGRSLEEIEMSLNPNFTKRD"
     misc_feature    350..1609
                     /gene="LOC139839726"
                     /note="Glucose transporters (GLUTs) and other similar
                     sugar transporters of the Major Facilitator Superfamily;
                     Region: MFS_GLUT_like; cd17315"
                     /db_xref="CDD:340873"
     misc_feature    order(374..376,386..388,734..736,743..748,755..757,
                     1088..1093,1103..1108,1115..1120,1193..1195,1379..1384,
                     1391..1396,1406..1408,1475..1480,1487..1489)
                     /gene="LOC139839726"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:340873"
     polyA_site      1793
                     /gene="LOC139839726"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatagaaagc ttaatgaaat ctaacatgtc actctttctg aatgagaggt acagatgcta
       61 tcattaatct gatccaatgg ccactactgc cgtcgccgcc gtatactccc cgcggttgac
      121 tccattttcc ggcaaccgta cacttccgac attcaatcca atccttcatg ctaacttttc
      181 aactcgccga tcttttcgtg tactcaattt atcaccgttg agagatttca aagcttattg
      241 caacaaaaat ccacagcttc ctgaactact tgattccaga aatgaaagtg atgtatcaaa
      301 agaagaagaa aacgacgtcg ggtggatacc tgcatttcct catatactta ttgcatctat
      361 gtcgaatttc cttttcgggt ttcatatcgg ggtaatgaat gggccaattg tatctatagc
      421 aaaagagcta gggtttgaag ggaattcgat acttgaaggg cttgtggtga gcatttttat
      481 tgcaggtgct tttttaggca gtgcaggtgc tggttatcta gttgacagac tcgggtttag
      541 gagaacgctt caagttgata caataccgct cattcttggt gcggttttaa gtgcacaagc
      601 tctttctttg gatcagttat tgtggggacg gtttctcgtg ggtcttggta ttggcgcaaa
      661 cgcggttctt gttcctattt atatatcaga ggtcggtcca acaaaatata ggggttcttt
      721 gggtagtttg tgtcaaattg gcacatgtac tggtataata gcctcacttt ttctaggaat
      781 tttctcggaa aatgatcctc attggtggag aacaatgctc tatattgcaa gtgtacctgg
      841 ctttgtatta gcatcgggta tgcagtttgc tgtagagagc ccacgctggc tatgcaaagc
      901 tgggaggctt gatcaggcga aacaagttat ctcaaatctg tggggaccat cagaagttga
      961 gagaagcatc gatgaatttc agtctgttct taagaacgat ggtggtgatt tggacagcaa
     1021 atggtcagag ctactacagg aaccacattc tagagttgct ttaattggag gcactctgtt
     1081 tgtactgcaa caatttgctg gcatcaatgc agttctttat ttttcctcat tgacttttaa
     1141 agatgctgga atcacaaacg gtgcattggc gagcttatat gttggactta caaattttgc
     1201 aggtgcactt tgttctttat acttggttga taaggaaggg aggcaaaaac ttattattgg
     1261 aagttacctg ggaatggcag tatccatgtt tcttgttgtt tctgctatca gctttcctgt
     1321 agatggagag ttgcgtaaca acttatctat acttgggaca atcttgtaca tgttgactta
     1381 tgcaattgga gctggtccag taactggtct tattatacct gagcttagca gcagcagggc
     1441 acgcgggaaa attatgagct tcagtttttc agttcactgg gtgtgtaatt tcatggttgg
     1501 cttattcttc cttgagctga tagaaagatt tggggttgca ccagtttacg ggtccttcgg
     1561 tgcagtttct ttattggcag ctgtattctc ttattctttc ttagttgaaa ctaaagggcg
     1621 gtctcttgaa gaaatcgaaa tgtcacttaa ccctaacttc acaaagcgtg attagggata
     1681 gttttttcga ctttaagaag gaaccaatat atacgctacc actcaatgta tttctaatag
     1741 taacacgttt gtatatagtt aagccttcaa taagatatat gacattttgg cta
//
LOCUS       XM_071829868            1649 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable plastidic glucose
            transporter 1 (LOC139839726), transcript variant X3, mRNA.
ACCESSION   XM_071829868
VERSION     XM_071829868.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1649
                     /gene="LOC139839726"
                     /note="probable plastidic glucose transporter 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839726"
     CDS             215..1531
                     /gene="LOC139839726"
                     /codon_start=1
                     /product="probable plastidic glucose transporter 1 isoform
                     X3"
                     /protein_id="XP_071685969.1"
                     /db_xref="GeneID:139839726"
                     /translation="MSNFLFGFHIGVMNGPIVSIAKELGFEGNSILEGLVVSIFIAGA
                     FLGSAGAGYLVDRLGFRRTLQVDTIPLILGAVLSAQALSLDQLLWGRFLVGLGIGANA
                     VLVPIYISEVGPTKYRGSLGSLCQIGTCTGIIASLFLGIFSENDPHWWRTMLYIASVP
                     GFVLASGMQFAVESPRWLCKAGRLDQAKQVISNLWGPSEVERSIDEFQSVLKNDGGDL
                     DSKWSELLQEPHSRVALIGGTLFVLQQFAGINAVLYFSSLTFKDAGITNGALASLYVG
                     LTNFAGALCSLYLVDKEGRQKLIIGSYLGMAVSMFLVVSAISFPVDGELRNNLSILGT
                     ILYMLTYAIGAGPVTGLIIPELSSSRARGKIMSFSFSVHWVCNFMVGLFFLELIERFG
                     VAPVYGSFGAVSLLAAVFSYSFLVETKGRSLEEIEMSLNPNFTKRD"
     misc_feature    215..1465
                     /gene="LOC139839726"
                     /note="Glucose transporters (GLUTs) and other similar
                     sugar transporters of the Major Facilitator Superfamily;
                     Region: MFS_GLUT_like; cd17315"
                     /db_xref="CDD:340873"
     misc_feature    order(230..232,242..244,590..592,599..604,611..613,
                     944..949,959..964,971..976,1049..1051,1235..1240,
                     1247..1252,1262..1264,1331..1336,1343..1345)
                     /gene="LOC139839726"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:340873"
     polyA_site      1649
                     /gene="LOC139839726"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attcaatcca atccttcatg ctaacttttc aactcgccga tcttttcgtg tactcaattt
       61 atcaccgttg agagatttca aagcttattg caacaaaaat ccacagcttc ctgaactact
      121 tgattccagt tgaggaaatg aaagtgatgt atcaaaagaa gaagaaaacg acgtcgggtg
      181 gatacctgca tttcctcata tacttattgc atctatgtcg aatttccttt tcgggtttca
      241 tatcggggta atgaatgggc caattgtatc tatagcaaaa gagctagggt ttgaagggaa
      301 ttcgatactt gaagggcttg tggtgagcat ttttattgca ggtgcttttt taggcagtgc
      361 aggtgctggt tatctagttg acagactcgg gtttaggaga acgcttcaag ttgatacaat
      421 accgctcatt cttggtgcgg ttttaagtgc acaagctctt tctttggatc agttattgtg
      481 gggacggttt ctcgtgggtc ttggtattgg cgcaaacgcg gttcttgttc ctatttatat
      541 atcagaggtc ggtccaacaa aatatagggg ttctttgggt agtttgtgtc aaattggcac
      601 atgtactggt ataatagcct cactttttct aggaattttc tcggaaaatg atcctcattg
      661 gtggagaaca atgctctata ttgcaagtgt acctggcttt gtattagcat cgggtatgca
      721 gtttgctgta gagagcccac gctggctatg caaagctggg aggcttgatc aggcgaaaca
      781 agttatctca aatctgtggg gaccatcaga agttgagaga agcatcgatg aatttcagtc
      841 tgttcttaag aacgatggtg gtgatttgga cagcaaatgg tcagagctac tacaggaacc
      901 acattctaga gttgctttaa ttggaggcac tctgtttgta ctgcaacaat ttgctggcat
      961 caatgcagtt ctttattttt cctcattgac ttttaaagat gctggaatca caaacggtgc
     1021 attggcgagc ttatatgttg gacttacaaa ttttgcaggt gcactttgtt ctttatactt
     1081 ggttgataag gaagggaggc aaaaacttat tattggaagt tacctgggaa tggcagtatc
     1141 catgtttctt gttgtttctg ctatcagctt tcctgtagat ggagagttgc gtaacaactt
     1201 atctatactt gggacaatct tgtacatgtt gacttatgca attggagctg gtccagtaac
     1261 tggtcttatt atacctgagc ttagcagcag cagggcacgc gggaaaatta tgagcttcag
     1321 tttttcagtt cactgggtgt gtaatttcat ggttggctta ttcttccttg agctgataga
     1381 aagatttggg gttgcaccag tttacgggtc cttcggtgca gtttctttat tggcagctgt
     1441 attctcttat tctttcttag ttgaaactaa agggcggtct cttgaagaaa tcgaaatgtc
     1501 acttaaccct aacttcacaa agcgtgatta gggatagttt tttcgacttt aagaaggaac
     1561 caatatatac gctaccactc aatgtatttc taatagtaac acgtttgtat atagttaagc
     1621 cttcaataag atatatgaca ttttggcta
//
LOCUS       XM_071829869            1657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable plastidic glucose
            transporter 1 (LOC139839726), transcript variant X4, mRNA.
ACCESSION   XM_071829869
VERSION     XM_071829869.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1657
                     /gene="LOC139839726"
                     /note="probable plastidic glucose transporter 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839726"
     CDS             223..1539
                     /gene="LOC139839726"
                     /codon_start=1
                     /product="probable plastidic glucose transporter 1 isoform
                     X3"
                     /protein_id="XP_071685970.1"
                     /db_xref="GeneID:139839726"
                     /translation="MSNFLFGFHIGVMNGPIVSIAKELGFEGNSILEGLVVSIFIAGA
                     FLGSAGAGYLVDRLGFRRTLQVDTIPLILGAVLSAQALSLDQLLWGRFLVGLGIGANA
                     VLVPIYISEVGPTKYRGSLGSLCQIGTCTGIIASLFLGIFSENDPHWWRTMLYIASVP
                     GFVLASGMQFAVESPRWLCKAGRLDQAKQVISNLWGPSEVERSIDEFQSVLKNDGGDL
                     DSKWSELLQEPHSRVALIGGTLFVLQQFAGINAVLYFSSLTFKDAGITNGALASLYVG
                     LTNFAGALCSLYLVDKEGRQKLIIGSYLGMAVSMFLVVSAISFPVDGELRNNLSILGT
                     ILYMLTYAIGAGPVTGLIIPELSSSRARGKIMSFSFSVHWVCNFMVGLFFLELIERFG
                     VAPVYGSFGAVSLLAAVFSYSFLVETKGRSLEEIEMSLNPNFTKRD"
     misc_feature    223..1473
                     /gene="LOC139839726"
                     /note="Glucose transporters (GLUTs) and other similar
                     sugar transporters of the Major Facilitator Superfamily;
                     Region: MFS_GLUT_like; cd17315"
                     /db_xref="CDD:340873"
     misc_feature    order(238..240,250..252,598..600,607..612,619..621,
                     952..957,967..972,979..984,1057..1059,1243..1248,
                     1255..1260,1270..1272,1339..1344,1351..1353)
                     /gene="LOC139839726"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:340873"
     polyA_site      1657
                     /gene="LOC139839726"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgacattca atccaatcct tcatgctaac ttttcaactc gccgatcttt tcgtgtactc
       61 aatttatcac cgttgagaga tttcaaagct tattgcaaca aaaatccaca gcttcctgaa
      121 ctacttgatt ccagttgagc aggaaatgaa agtgatgtat caaaagaaga agaaaacgac
      181 gtcgggtgga tacctgcatt tcctcatata cttattgcat ctatgtcgaa tttccttttc
      241 gggtttcata tcggggtaat gaatgggcca attgtatcta tagcaaaaga gctagggttt
      301 gaagggaatt cgatacttga agggcttgtg gtgagcattt ttattgcagg tgctttttta
      361 ggcagtgcag gtgctggtta tctagttgac agactcgggt ttaggagaac gcttcaagtt
      421 gatacaatac cgctcattct tggtgcggtt ttaagtgcac aagctctttc tttggatcag
      481 ttattgtggg gacggtttct cgtgggtctt ggtattggcg caaacgcggt tcttgttcct
      541 atttatatat cagaggtcgg tccaacaaaa tataggggtt ctttgggtag tttgtgtcaa
      601 attggcacat gtactggtat aatagcctca ctttttctag gaattttctc ggaaaatgat
      661 cctcattggt ggagaacaat gctctatatt gcaagtgtac ctggctttgt attagcatcg
      721 ggtatgcagt ttgctgtaga gagcccacgc tggctatgca aagctgggag gcttgatcag
      781 gcgaaacaag ttatctcaaa tctgtgggga ccatcagaag ttgagagaag catcgatgaa
      841 tttcagtctg ttcttaagaa cgatggtggt gatttggaca gcaaatggtc agagctacta
      901 caggaaccac attctagagt tgctttaatt ggaggcactc tgtttgtact gcaacaattt
      961 gctggcatca atgcagttct ttatttttcc tcattgactt ttaaagatgc tggaatcaca
     1021 aacggtgcat tggcgagctt atatgttgga cttacaaatt ttgcaggtgc actttgttct
     1081 ttatacttgg ttgataagga agggaggcaa aaacttatta ttggaagtta cctgggaatg
     1141 gcagtatcca tgtttcttgt tgtttctgct atcagctttc ctgtagatgg agagttgcgt
     1201 aacaacttat ctatacttgg gacaatcttg tacatgttga cttatgcaat tggagctggt
     1261 ccagtaactg gtcttattat acctgagctt agcagcagca gggcacgcgg gaaaattatg
     1321 agcttcagtt tttcagttca ctgggtgtgt aatttcatgg ttggcttatt cttccttgag
     1381 ctgatagaaa gatttggggt tgcaccagtt tacgggtcct tcggtgcagt ttctttattg
     1441 gcagctgtat tctcttattc tttcttagtt gaaactaaag ggcggtctct tgaagaaatc
     1501 gaaatgtcac ttaaccctaa cttcacaaag cgtgattagg gatagttttt tcgactttaa
     1561 gaaggaacca atatatacgc taccactcaa tgtatttcta atagtaacac gtttgtatat
     1621 agttaagcct tcaataagat atatgacatt ttggcta
//
LOCUS       XM_071829870             995 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL30w-like (LOC139839727), mRNA.
ACCESSION   XM_071829870
VERSION     XM_071829870.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..995
                     /gene="LOC139839727"
                     /note="large ribosomal subunit protein uL30w-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 39 Proteins"
                     /db_xref="GeneID:139839727"
     CDS             107..844
                     /gene="LOC139839727"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL30w-like"
                     /protein_id="XP_071685971.1"
                     /db_xref="GeneID:139839727"
                     /translation="MAEVAKGGPNVPESVLKKQKRNEEWALAKKQEVDDLKKKNAANR
                     KLIFNRAKQYSKEYEAQDKELIQLKREARLKGGFYVNPEAKMLFIIRIRGINAMDPKS
                     KKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLN
                     KQRIPLTDNSIVEQGLGKFGIICVEDLIHEILTAGPHFKEANNFLWPFKLKAPLGGMK
                     KKRNHYVEGGDAGNRENFINELIRRMN"
     misc_feature    143..841
                     /gene="LOC139839727"
                     /note="60S ribosomal protein uL30, eukaryotic form;
                     Region: uL30_euk; TIGR01310"
                     /db_xref="CDD:273548"
     polyA_site      995
                     /gene="LOC139839727"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacaaagtta attaaaacac acaccctaca aaaccctaat tcttcgtttc gcctccattc
       61 tcagtcatcc attcgtcacc ggcgccactt ccgttagggt aaagaaatgg ctgaagttgc
      121 taagggagga ccgaatgtac ccgagtcagt gttgaagaag caaaagagaa atgaggaatg
      181 ggctcttgct aagaagcaag aggttgatga tttgaagaaa aagaatgctg caaacaggaa
      241 gttgatcttt aacagggcta agcagtacag caaggagtat gaagctcagg acaaggagtt
      301 gattcagttg aagcgtgagg ctaggttgaa aggtggattt tatgtcaacc cagaagcaaa
      361 gatgctcttt attatccgta tccgaggtat taatgctatg gacccaaagt caaagaagat
      421 tttgcagctt ttgcgtctga gacagatatt taatggcgtg tttctgaaag tcaataaagc
      481 cacattgaac atgttacaca gggtcgagcc ttatgttacc tatgggtacc ctaacttgaa
      541 gagtgttagg gagttgattt acaagagagg gtacggaaag cttaacaagc aaagaatccc
      601 attaactgac aactcaattg ttgaacaggg tcttgggaaa tttggcatca tttgtgttga
      661 agatcttatt catgagattt tgactgctgg tcctcatttc aaagaagcaa acaactttct
      721 atggccattc aagctaaagg cacctttggg tggtatgaaa aagaagagaa accattacgt
      781 tgagggtgga gatgctggaa accgtgaaaa ctttatcaat gagctaatca ggaggatgaa
      841 ttagaattaa aatgatgttg attttgtggt ctagtgtttt gagctgtatg atcaaaatat
      901 tgtttacttg tctttggatc ttagagagtt ggatactact actattatct ttaaggaaaa
      961 agaatgtaac atcatttaga gtggtttttg gtttt
//
LOCUS       XM_071829871            2213 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            1.2-like (LOC139839729), mRNA.
ACCESSION   XM_071829871
VERSION     XM_071829871.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2213
                     /gene="LOC139839729"
                     /note="protein NRT1/ PTR FAMILY 1.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139839729"
     CDS             388..2127
                     /gene="LOC139839729"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 1.2-like"
                     /protein_id="XP_071685972.1"
                     /db_xref="GeneID:139839729"
                     /translation="MEVPLEEECAMIEVKKSNKQKGGLITMPFILANESFEKVASFGL
                     LPNMIVYLLSDYHMSVAQGTNVLLIWSAATNFLPIIGAFLSDSLLGRFLTIFLGSIFS
                     VMGMILLWLTTMIRNSKPAHCDIRVPKSCEAPTTIQYTLLYSAFALMSIGAGGVRPCS
                     LAFGADQIDSNKDNPKRERLLESFFGWYYASAIVAVLIAFTGIVYIQDHHGWRVGFGV
                     PVILMIVSTLCFVVAYPLYYNIKVEKSLFTSFCQVISVTWKNRKLTLSDSSDKAWYIK
                     KNATVTVPTERLRFLNKACILIKPEDTSKDPWSICTVEQVEELKALIRVVPLWSSCIM
                     LCVNMNQVTFPVLQAKSMDRHITKGFEIPAGSFSFFTIVTVMVWVILYDRVILPLLSK
                     VKCKPAYINVKFRMGAGLVFSIMAMVMSGIIEHTRKSKAIEEGFLNNSQAVVNMSAMW
                     LVPQHVLNGLADALNIIGQTEFYYTEFPKSMSSIAASLYLLGAGFGSLLASFILSTVD
                     GLTKGGGKESWISTNINKGHYDNYYWLLGIISCINFLYYVVCSWAYGPCADRMVVKGE
                     SVQNLAEDEVSIS"
     misc_feature    466..2049
                     /gene="LOC139839729"
                     /note="NRT1/PTR family (NPF), subfamily 1 and 2 of the
                     Major Facilitator Superfamily of transporters; Region:
                     MFS_NPF1_2; cd17416"
                     /db_xref="CDD:340974"
     misc_feature    order(496..501,508..513,520..522,619..621,844..849,
                     853..861,868..870,952..954,961..966,973..975,1381..1383,
                     1390..1395,1402..1407,1414..1416,1510..1512,1522..1524,
                     1768..1773,1783..1785,1795..1797,1843..1845,1852..1857,
                     1864..1869,1876..1878)
                     /gene="LOC139839729"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340974"
ORIGIN      
        1 gttttgtcag atctcaaaat ccaaacacat ataaaacata tttcagttct cattgccgtc
       61 caatcccgtg tcgtttatgt tatccgggtc ccatgttaac tgtctatatg aactcgagca
      121 acttcgtatg taagagaaat acttattttt gatgtcaagg ttataagttt caagtaccac
      181 aagtgtcttg ctatagataa gaaatgcaat tgtccacttg atttatgagc acttgcatcc
      241 acatgtttat ggtcaaactt tcataaaaac atcacctatt gtgcagattt agacaatttt
      301 aaggcagtaa cttattagtt ttaaagaata aattatagag caaattttga cccattaaag
      361 cagttggatt tagtacaaga aagacaaatg gaggttcctt tggaagaaga atgtgcaatg
      421 atagaagtga agaaatcaaa caaacaaaag ggtggtttaa taaccatgcc attcatctta
      481 gcaaatgaat catttgagaa agttgcaagt tttgggctac ttccaaacat gattgtatac
      541 ttgctctcgg attaccatat gagcgtcgcg cagggcacca atgttctctt aatttggtct
      601 gccgctacaa atttcttgcc aatcatcggt gcctttcttt ccgattcact tcttggccgc
      661 ttcctgacca tttttcttgg ttctatcttc agtgttatgg ggatgatcct tctatggtta
      721 acaacaatga tccgaaattc aaaacctgcc cattgtgata tacgggtacc taaatcgtgc
      781 gaagcaccga caaccattca atacaccctc ctctattcag cctttgcttt gatgtctatc
      841 ggagctggtg gtgtacggcc gtgttcgtta gcatttgggg cggatcaaat agactccaac
      901 aaggataacc caaaaaggga aaggttacta gaaagcttct ttgggtggta ttatgcatca
      961 gccattgttg ccgtcttgat tgcatttacc ggtattgttt atattcaaga tcatcatgga
     1021 tggagggtcg gttttggggt cccggttatt cttatgatcg tttctacact atgtttcgtt
     1081 gttgcttatc ctttgtatta caatataaag gtcgagaaaa gtttatttac gagcttttgt
     1141 caagtaatat cagtgacttg gaaaaatagg aagttaacat tatccgattc aagtgataaa
     1201 gcatggtata tcaagaagaa tgcaacggtt actgtaccta cagagagatt aaggttctta
     1261 aataaagctt gcatccttat aaaaccagaa gatacaagca aagatccatg gagcatttgc
     1321 actgtcgaac aagtagaaga gctaaaggcg cttataagag tcgtaccctt atggtcttct
     1381 tgtataatgt tgtgtgtgaa catgaaccaa gttacatttc cagttctgca agcaaaaagc
     1441 atggacagac acatcactaa aggcttcgaa attccagctg gctcgttttc tttcttcaca
     1501 atcgtaaccg taatggtttg ggtcatacta tacgaccgag tcatcctccc gttattatca
     1561 aaagttaaat gtaaacccgc gtatatcaac gtaaaattta gaatgggcgc gggcctcgtt
     1621 ttctcaataa tggcaatggt gatgtcggga atcatagaac acacgcgaaa aagtaaagca
     1681 atcgaagaag ggtttttgaa taattctcaa gcggtagtta acatgtcagc tatgtggctt
     1741 gttccgcaac atgtacttaa tgggttagcc gatgctttga atattatcgg tcaaaccgag
     1801 ttttattata ctgagttccc gaagagtatg tcgagcattg cagcttcgct ttatttgctt
     1861 ggggccggtt ttggaagctt attggctagt tttatactaa gtactgtgga tggtcttact
     1921 aaagggggtg gtaaagagag ttggatttca acaaatataa ataagggtca ttatgataac
     1981 tattattggc ttcttggtat aataagttgt ataaattttt tgtattatgt tgtatgcagt
     2041 tgggcttatg gtccttgtgc tgatagaatg gtagtaaaag gtgaaagtgt tcaaaatttg
     2101 gctgaagatg aggtgtcaat aagttaggat cagaagttta aggagttgac taatggtcaa
     2161 cattatgtag atgtatatgt acaagtttac aatgattata ttaatattaa taa
//
LOCUS       XM_071829872            1350 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic translation
            initiation factor 2 subunit alpha homolog (LOC139839730), mRNA.
ACCESSION   XM_071829872
VERSION     XM_071829872.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1350
                     /gene="LOC139839730"
                     /note="eukaryotic translation initiation factor 2 subunit
                     alpha homolog; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 20 Proteins"
                     /db_xref="GeneID:139839730"
     CDS             108..1121
                     /gene="LOC139839730"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 2
                     subunit alpha homolog"
                     /protein_id="XP_071685973.1"
                     /db_xref="GeneID:139839730"
                     /translation="MANLECRMYEAKFPDVDMAVMIQVKSIGEMCAYVSLLEYNNIEG
                     MILLSELSRRRIRSINSLIKVGRTEPVMVLHVDEEKGYVNLSKRRVSEEDIQICEDRY
                     NKSKLVHSIMRHVAETMELDLEDLYVHIGWPLYRKYGHAFEAFKLIVNDPDSILNTLT
                     REVKEAGPDGVEVTKVVPALTEEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVL
                     HIKDAMRKAEAAGNDDCPVKMKLIAAPSYVLITQTLDKEQGISVLTKAIAACTEEIER
                     HKGKLTVKEPPRAVSERDDILLAERMAKLSQANEEVEGDDDSEEEEDTGMGEIDLDKQ
                     QEI"
     misc_feature    111..1001
                     /gene="LOC139839730"
                     /note="eukaryotic translation initiation factor 2 subunit
                     1; Provisional; Region: PTZ00248"
                     /db_xref="CDD:240329"
ORIGIN      
        1 acaatattct agtcatcacg atttctattg aattcacgat attgcattag cttatacatc
       61 cttatcaaaa ccctaataaa actctcaaaa tctccgattc acaaaccatg gcgaatctcg
      121 aatgccgcat gtacgaggcc aaatttccgg atgtcgatat ggccgtcatg attcaagtca
      181 aaagcatcgg tgagatgtgc gcttacgtgt cactactcga atacaataac attgaaggta
      241 tgattttgct gtctgagctt tctcgacggc ggattcgtag catcaatagt ttgattaagg
      301 tagggaggac ggaaccggtg atggtgttgc acgtagatga agaaaaagga tatgtgaatc
      361 tgagtaaaag aagggtttca gaagaggata tacagatttg tgaagatagg tataataaga
      421 gtaaacttgt tcactctatt atgcgtcacg ttgctgaaac tatggagctt gatcttgagg
      481 atctgtacgt tcatattggt tggcctttgt accggaagta tggccatgca tttgaggcgt
      541 tcaagttgat tgtgaatgat cctgattcca ttcttaatac acttacccgt gaagttaaag
      601 aagctggtcc cgatggagtg gaggtgacaa aagttgttcc tgctttgacc gaggaagtca
      661 aagatgcatt ggtaaagaac attaggagaa gaatgactcc acaacctttg aagattcgtg
      721 cagatattga gatgaaatgc tttcaatttg atggggttct tcacattaag gatgcaatgc
      781 ggaaggctga agctgctggg aatgatgact gccctgttaa aatgaagttg attgctgctc
      841 catcttatgt tcttatcact caaacactcg acaaggagca agggatttca gttctcacta
      901 aagcaattgc tgcttgtacc gaagagatag agcgccacaa gggtaaactt acagtgaagg
      961 agccaccgag agcggtgagt gaacgggatg acatattact tgctgaacgt atggctaagc
     1021 taagtcaagc caatgaagaa gttgaaggag atgatgatag tgaagaggaa gaagatactg
     1081 gaatgggaga aatcgatttg gacaaacagc aggaaattta ggcaacaaag agttttgatc
     1141 gaatactttt tgagataaga gcttccttat ttataatatt cggttactag tatttagttt
     1201 tatttaatgt taactaaaca attgaataga agtttgatgc catcatacat agtgatttta
     1261 caatgttatg tggtaaacta ttgtttctgg acctctctgc atgtagacgt tgcaattgca
     1321 attgtactgt atcttaacat gattttttct
//
LOCUS       XM_071829873            1297 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic translation
            initiation factor 2 subunit alpha homolog (LOC139839731), mRNA.
ACCESSION   XM_071829873
VERSION     XM_071829873.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1297
                     /gene="LOC139839731"
                     /note="eukaryotic translation initiation factor 2 subunit
                     alpha homolog; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 26 Proteins"
                     /db_xref="GeneID:139839731"
     CDS             81..1124
                     /gene="LOC139839731"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 2
                     subunit alpha homolog"
                     /protein_id="XP_071685974.1"
                     /db_xref="GeneID:139839731"
                     /translation="MSTASPINSDCRMYEARFPEVDTPVMIQVKEIGDVATHVALLEY
                     NNIEGMILLSDLSRRRIRSVGSLIRVGRIEPAMVLRVNAEKGYIDLSKKRLSDQDIRV
                     CEERYSKSKLVHSIMRHVAETMNADLEDLYIHVGWPLYRKYGHAFEAFKEIVNDPDSV
                     LKSLTRELKEIGPDGKEVTKVVPAISDDVKEALVRNIRRRMTPQPLKIHSVIEMKCFE
                     FDGVLHIKDAMRKAEAVGTKECPVKMKLVAAPSYVLYTQTLDKEQGVKVLNKAIAVCA
                     TTIERHKGKLTVKEAPRAVSEREDKLIAEQMARLERQNAEVSGDEDSEAEEDTGMGSV
                     DLDNSSTSSGMMD"
     misc_feature    99..1064
                     /gene="LOC139839731"
                     /note="eukaryotic translation initiation factor 2 subunit
                     1; Provisional; Region: PTZ00248"
                     /db_xref="CDD:240329"
ORIGIN      
        1 gtatttcatt tttctctcac aaaacccaat ttcttataaa accctaaaaa atactgtagt
       61 gtataccacc aatttctcag atgtctacgg cgtcacctat aaattcagac tgccggatgt
      121 atgaggctcg attcccggag gttgatactc cggtgatgat tcaggtgaaa gaaatcggag
      181 atgtagctac tcatgtggct ctccttgagt acaacaatat cgaaggtatg atattgttat
      241 cagatctgtc tcgcaggcgc attcgaagcg ttggtagctt aattagagtc ggccgtattg
      301 aacctgctat ggtgcttcgt gttaatgctg aaaaaggtta tattgatttg agtaaaaaac
      361 ggttatcgga tcaggatata cgagtttgtg aagagaggta cagtaagagc aagcttgttc
      421 actcgattat gagacatgtt gctgaaacaa tgaatgctga tctcgaggat ttgtacatcc
      481 atgttggctg gcctctgtac cgaaaatatg gtcatgcatt tgaggcattc aaagaaattg
      541 ttaatgatcc tgattcagtg ctgaagtcgt tgactcgtga actaaaagaa attggtccag
      601 atgggaagga ggtgactaag gtggttcctg caatttctga tgatgtaaaa gaagctctgg
      661 ttcgaaacat aagaagacga atgactccac aaccgttgaa aatacattct gttattgaaa
      721 tgaagtgttt tgaatttgat ggtgtgctcc acattaagga tgccatgcga aaagctgaag
      781 cggttggtac caaagagtgc ccagtgaaga tgaaattggt cgctgcacca tcttatgttc
      841 tttacactca gactctggat aaggaacaag gggtaaaagt gctcaataaa gcgattgctg
      901 tttgtgctac aacgattgag cgccataaag ggaaacttac tgtaaaagag gcacctagag
      961 cagtgagtga acgagaggac aaattgattg cagaacagat ggcaagactt gagcgtcaaa
     1021 atgcagaggt tagtggtgat gaagatagtg aagcagaaga agatacagga atgggttctg
     1081 ttgatttgga taatagctca acttcttctg gtatgatgga ttagagattt aggtgatgtt
     1141 ggatttttat gatcaggtga aaacagatac atgtttcaaa aactgcatct gttaaatttt
     1201 gttcttgttg gtgtattact tttgccaatc tactaatcct tgaatgggct tgtataaact
     1261 gagattttgc tttgttcgat atgctagttt gtttcct
//
LOCUS       XM_071829875            1346 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alcohol dehydrogenase-like 7
            (LOC139839732), mRNA.
ACCESSION   XM_071829875
VERSION     XM_071829875.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1346
                     /gene="LOC139839732"
                     /note="alcohol dehydrogenase-like 7; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139839732"
     CDS             92..1255
                     /gene="LOC139839732"
                     /codon_start=1
                     /product="alcohol dehydrogenase-like 7"
                     /protein_id="XP_071685976.1"
                     /db_xref="GeneID:139839732"
                     /translation="MNRKSSTDTSGKPIQCKAAIAREPGKPLVIEEVIVAPPKHREVR
                     IKIICTTLCHSDVTFWKLEHPPAIFPRILGHEAVGVVESVGEGVHEVVEGDTVIPIFL
                     PDCGECTDCLSHKSNVCTKLPFSVSPWMNREKTSRFTDINGDTLYHFLNVSSFSEYTV
                     VDIAHLTKIDPTIPANKACLLSCGISTGLGATWKTAKVEAGTTVAIFGLGAIGLAVAE
                     GARLCGSTKIIGIDVNPDKFELGKKFGVTDFVNSRDIGDKTVTQVIMEMTDGGADYCF
                     ECVGLTSLMQEAYASCRKGWGKTVILGVDQPGAMLTFSSFEVLHSGKTLTGSLFGGVK
                     PKSDIPILIKRYMDKELQLDEFVTHEIEFEEINKAFDLLLQGKSLRCVIWMKK"
     misc_feature    131..1243
                     /gene="LOC139839732"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     Region: MDR; cl16912"
                     /db_xref="CDD:450120"
     misc_feature    order(248..256,263..265,638..640,650..652,713..730,
                     785..790,800..802,845..847,923..928,995..1000,1073..1081)
                     /gene="LOC139839732"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:176261"
ORIGIN      
        1 aaccacaaca ttacacagtt tttctgtctt gtgacactga caaacaaaca aaataaaaag
       61 gtccaattgg tgtgtgtgtt gagtgttaag tatgaaccga aaaagctcca ctgatacttc
      121 cggcaagcct atccaatgca aagctgcaat tgccagggaa cccggtaaac cactggtgat
      181 agaagaagtg attgtggctc caccgaaaca tcgtgaagtt cgaattaaaa ttatatgtac
      241 tactctttgt cacagtgatg ttaccttttg gaaattggag catcctcctg ctatcttccc
      301 tagaatactc ggtcatgaag cggttggggt tgtagagagt gtgggagaag gtgtacacga
      361 agttgttgaa ggagacactg tgatcccgat ttttttgcca gattgtggtg aatgtacgga
      421 ttgtttgtcc cataaaagca acgtatgtac aaaattaccc ttcagtgttt ctccatggat
      481 gaatcgagag aagacgagca ggttcacaga catcaatgga gatactttat accacttctt
      541 gaatgtgtcg agttttagtg agtacacggt cgttgacatt gctcatctca ctaaaattga
      601 tccaacaata ccagcaaaca aggcttgcct cttaagttgt ggcatatcaa ctgggttagg
      661 tgctacttgg aaaacggcaa aggtggaagc tggcacaaca gttgctatat tcggattggg
      721 cgcaattggg ctagcagttg ctgagggtgc aaggctatgc ggatctacga agatcattgg
      781 cattgatgtg aacccagaca agtttgaact aggaaagaaa tttggagtga ctgattttgt
      841 gaactcccgg gatattggtg acaaaactgt gacccaggta ataatggaga tgactgatgg
      901 gggtgcagac tattgctttg agtgtgttgg tttgacgtcc ttaatgcaag aagcatacgc
      961 ttcgtgtaga aagggatggg ggaaaacggt gattttagga gttgaccagc ccggcgcaat
     1021 gttgaccttc agttctttcg aggttcttca cagcggaaaa actcttactg gatccctttt
     1081 tggaggtgtc aaaccaaaat ctgatatccc gattctcata aaacgttaca tggataagga
     1141 actacaactc gatgaatttg ttactcatga gatcgagttt gaagagatca acaaggcttt
     1201 tgatttgctt cttcaaggga agagcctacg gtgtgtgata tggatgaaaa agtgatttga
     1261 actgatttgt aattttatct tttttgttgc atatgtagtc aagaaaatta tactatgtta
     1321 actgtgtgtt gtaaaattct tgttat
//
LOCUS       XM_071829876            2599 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides C2 domain-containing protein
            At1g53590-like (LOC139839733), mRNA.
ACCESSION   XM_071829876
VERSION     XM_071829876.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2599
                     /gene="LOC139839733"
                     /note="C2 domain-containing protein At1g53590-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139839733"
     CDS             317..2461
                     /gene="LOC139839733"
                     /codon_start=1
                     /product="C2 domain-containing protein At1g53590-like"
                     /protein_id="XP_071685977.1"
                     /db_xref="GeneID:139839733"
                     /translation="MDITEVSIIHHVGIVLLMIWLLSSFNYCHPLVYFVSLIYLYLVH
                     DNFSTRFRKKVRFEERRQANQKRVLSDSESVRWLNHLVEKIWPICMENIVSQQILLPI
                     IPWFLQKYKPWTVKEAVVQSLYMGRSPPMITEMRVCRQSTGDDHLVLEMGLNFRTADD
                     MSAILAAKLTKRLGFGMSAKMHLTGMHVEGKVLVGIRFLPRWPFLGRLRVCFVEPPYF
                     QMTVKPIFAHGLDVTEVPGIAGWLDKLLQVAFEETLVEPNMLVVDVAKFVSPEPEPWF
                     SVDAKEPVGYALVEIVEGSNMKPSDMNGLADPYVKGNLGGYRFKTKIHKKTLSPQWFE
                     EFKIPISSWDSANLLDIEVRDKDHFVDDSLGICCIKINDFKDGERHDMWLPLENVKTG
                     RLHLAVRVIEGVEKLFEQPCDNAKEDGSLKPEKSKETDTDILVPIDVEGQRETGIWVH
                     HPGAEVAQVWEPRKGKNRVPKDSLSVSSSIKSDTYPNDSSSTDESLEGSNKPKSKNMV
                     KRGINKFGSMFHRSPRPVDDKDKDQLKSPKTRIDDDCDSPPHHNVRSVKEKGIGVNLV
                     MDENPKNLKVGFEESPEGSDPESPDKRKVKDTVKGILKHTGNSARGLMHAISRKGSNK
                     DREIDLNVQSDSCGDVGSVPSPDGLQSPGGGSGPGQMGSTKAALSPLSPTIVNGSSGV
                     VIDDLDLNAIDKGEVDDSRRTPEEKPSSPSTK"
     misc_feature    344..>1573
                     /gene="LOC139839733"
                     /note="Ca2+-dependent lipid-binding protein, contains C2
                     domain [General function prediction only]; Region:
                     COG5038"
                     /db_xref="CDD:227371"
     misc_feature    596..1105
                     /gene="LOC139839733"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain superfamily; Region: SMP_SF; cd21669"
                     /db_xref="CDD:439225"
     misc_feature    order(596..598,605..610,620..622,632..634,689..691,
                     704..706,773..775,797..799,803..805,809..811,878..880,
                     890..892,896..898,938..940,944..946,950..952,980..982,
                     1052..1054,1061..1066,1085..1087,1091..1102)
                     /gene="LOC139839733"
                     /note="lipid binding site [chemical binding];
                     lipid-binding site"
                     /db_xref="CDD:439225"
     polyA_site      2599
                     /gene="LOC139839733"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaacataaa acagtcacat atttgttgta taaaatttct gtttctatat tgcaaccaaa
       61 accattatct taacgtactg gagttgtctt cttggtacac acccatccca gttttcaaat
      121 ttcaaaccct agggttttcc taaatcttga tcttgttatt gggttcggag aaaaaagttt
      181 agattatgat gaactgggtc ggtttaagat cttcaatttt atggatttga atggttaatt
      241 tgaaaaaaag agatcttgta gtttaagttg aagaagaata aaacgtcaaa ggtcaacggt
      301 tggaatttga atccaaatgg atataacaga ggtttcaatt attcatcatg tgggcattgt
      361 gttgttgatg atatggttac tttcttcatt caattactgt cacccattgg tttattttgt
      421 atctttgatc tatctttatc tggttcatga caatttttca acaagattca ggaagaaagt
      481 gaggtttgaa gaaagaagac aggctaatca aaaaagggtg ctatctgatt ctgaatcggt
      541 acggtggttg aatcatttgg ttgaaaagat ttggccaata tgtatggaaa atattgtctc
      601 gcaacaaatt ctgcttccaa tcataccttg gttcttgcag aagtacaaac catggactgt
      661 gaaagaagct gtagttcaga gtttgtatat gggaagatct ccaccaatga ttactgaaat
      721 gagggtgtgt cgtcaatcta ctggtgacga tcatttggtt ttggagatgg gactaaattt
      781 tagaacagcg gatgacatga gtgcaatatt agcagccaaa ctgacaaaac gattaggttt
      841 tggaatgtcg gcaaaaatgc atttgacagg aatgcatgtt gaaggaaagg ttttggtggg
      901 gattaggttt cttccaagat ggccgtttct tggacgtctt agggtgtgtt ttgtcgaacc
      961 accgtacttt cagatgacgg taaaaccgat atttgctcat ggtcttgatg ttactgaagt
     1021 tcctggtatt gctggatggc tggataagct tctgcaagtt gcattcgagg agacattggt
     1081 tgagcctaac atgttggtgg tagatgtcgc aaaatttgtg tcgccggaac cagaaccttg
     1141 gttttcggtc gatgcaaagg aaccggttgg ttatgcattg gtggaaattg tggaaggatc
     1201 taacatgaaa ccttcggaca tgaacgggtt ggctgatcct tacgtaaaag gcaatcttgg
     1261 tggataccga ttcaaaacca agatacataa aaagacatta tctcctcagt ggtttgaaga
     1321 atttaagatt cccatttctt catgggattc agcaaatctt cttgatatcg aagtccgtga
     1381 taaagaccac tttgttgatg acagcctcgg catttgctgt ataaagatta atgattttaa
     1441 agatggcgag agacatgaca tgtggttacc tcttgaaaac gttaaaacgg gaaggttgca
     1501 tcttgcagta cgagttattg aaggtgtaga gaagctattc gaacaaccgt gtgacaacgc
     1561 gaaagaagac gggtcgctaa aacccgaaaa atctaaagaa acggacacgg atattttagt
     1621 accaattgat gtggaaggtc aacgagagac cggcatatgg gttcaccacc cgggggccga
     1681 ggtagcacaa gtatgggagc cgagaaaggg gaaaaatcgg gtcccgaaag atagcttgtc
     1741 agtcagcagt agcatcaagt cggatacgta cccgaatgac tcaagcagta ctgatgaaag
     1801 cctggaaggt agtaacaaac cgaagtctaa aaatatggtt aaaaggggaa tcaataagtt
     1861 cggttctatg tttcatagaa gcccgaggcc cgtagatgat aaagataaag atcaattgaa
     1921 aagccctaaa acacggattg atgacgattg tgattctcct ccacatcata atgtacgatc
     1981 ggtgaaggaa aaggggatcg gtgtgaactt agttatggat gaaaacccta aaaacctgaa
     2041 agttggattc gaagagagcc ctgaaggaag tgatccagaa agccctgata agagaaaagt
     2101 caaagataca gtcaaaggta ttctgaagca tactggtaat tctgctcgtg gtttgatgca
     2161 cgccatttcg cgtaaagggt ctaataaaga tagagagata gatttgaatg ttcagtcgga
     2221 ctcttgtggt gatgtggggt ccgttccgtc accagacggg ctacagagtc cgggtggtgg
     2281 atctggtcct ggtcaaatgg gttcaactaa agctgcattg agtcctttga gcccaaccat
     2341 tgtgaatggg tcaagtgggg ttgtaattga tgatctggat ttaaatgcga tagataaagg
     2401 cgaggttgat gattctagaa gaacacctga ggaaaaacct tcgtctcctt cgactaaata
     2461 atggattata tatattatgc ttttaagctg tggatgtaat ttttgtgttt atatacatgt
     2521 gtttaagctg catgatggtg gtgttgaata tgtaaatgac aaaaggttta tcgttaattt
     2581 tcactgtttt ggatcttaa
//
LOCUS       XM_071829877             647 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RING-box protein 1a-like
            (LOC139839734), mRNA.
ACCESSION   XM_071829877
VERSION     XM_071829877.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..647
                     /gene="LOC139839734"
                     /note="RING-box protein 1a-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139839734"
     CDS             76..426
                     /gene="LOC139839734"
                     /codon_start=1
                     /product="RING-box protein 1a-like"
                     /protein_id="XP_071685978.1"
                     /db_xref="GeneID:139839734"
                     /translation="MDSDVTMVPAGEGASAPGPSSSSNKRPKRFEIKKWNAVALWAWD
                     IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVC
                     PLDNSEWEFQKYGH"
     misc_feature    217..402
                     /gene="LOC139839734"
                     /note="modified RING finger, H2 subclass (C3H2C2D-type),
                     found in RING-box protein 1 (RBX1) and similar proteins;
                     Region: mRING-H2-C3H2C2D_RBX1; cd16485"
                     /db_xref="CDD:438148"
     misc_feature    order(313..315,319..321,325..327,340..342,352..354,
                     364..366)
                     /gene="LOC139839734"
                     /note="cullin binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438148"
     polyA_site      647
                     /gene="LOC139839734"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgtaagtac aggaagaatt actttgttac ttttcaaaag agggaacgcc ttgagaattg
       61 tgaattagta aaatcatgga ttccgacgtg acaatggttc ccgccggtga aggagccagt
      121 gctcccggtc cttcttcttc atctaacaaa agacctaagc gttttgaaat caaaaagtgg
      181 aacgctgtcg ctttatgggc ttgggatatt gttgtggaca attgtgctat ttgcagaaat
      241 catatcatgg atctttgtat tgaatgccaa gctaatcagg ctagtgccac tagtgaggag
      301 tgtactgtgg cttggggcgt ttgcaaccat gcttttcact ttcactgcat cagtcgctgg
      361 ttgaagaccc gtcaagtttg ccctctagac aacagtgaat gggagttcca gaagtatggt
      421 cattagagag ctcgctctag gccatgtgta agaaggaacc ttgcaagtta tcactggaag
      481 ggaaaaacat ttggctttgt tttttgtttt tcttttattg taatactgtt ttgagctgct
      541 gacgatatgt acacagattt tcaactagct aagagaaaac gtgtgtagct tcttgaaccg
      601 tgaccgtgat acagtgttaa tgaacttttt gcttgctttg ttcctta
//
LOCUS       XM_071829878            1059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides LIM domain-containing
            protein WLIM2a-like (LOC139839735), mRNA.
ACCESSION   XM_071829878
VERSION     XM_071829878.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1059
                     /gene="LOC139839735"
                     /note="LIM domain-containing protein WLIM2a-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839735"
     CDS             226..861
                     /gene="LOC139839735"
                     /codon_start=1
                     /product="LIM domain-containing protein WLIM2a-like"
                     /protein_id="XP_071685979.1"
                     /db_xref="GeneID:139839735"
                     /translation="MAFTGTLEKCKVCEKTVYFLEMISADGINYHQTCFKCSQCNGKL
                     TISTYSSLEGVLFCKPHFEQKFKERGGLPKVTPAKPQEPGKAPSKLAALFSGTQDKCA
                     VCKKTVYPLEKVTVEGEFYHKGCFRCTQGGCFLTPSNYAALDGNLFCKPHFSQLFKEK
                     GSYNHLKQAATIKKAGGAPTEEPSADNQEQSTEKEESSTTEETTRDEEAED"
     misc_feature    241..429
                     /gene="LOC139839735"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; Region: LIM; cl02475"
                     /db_xref="CDD:413332"
     misc_feature    order(253..255,262..264,316..318,325..327,334..336,
                     343..345,397..399,406..408)
                     /gene="LOC139839735"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:259829"
     misc_feature    526..708
                     /gene="LOC139839735"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; Region: LIM; cl02475"
                     /db_xref="CDD:413332"
     misc_feature    order(526..528,535..537,589..591,598..600,607..609,
                     616..618,670..672,679..681)
                     /gene="LOC139839735"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:259829"
ORIGIN      
        1 aacccctcgt tgacctaaaa tgtctctctt catacaatta ttaaacgagg aaaaattgga
       61 taaaaaaact aattgatttc catcacaaaa tggaagtgat catcacgtta catatttcat
      121 tctttcaaaa gttgcttgca caatttaatc acattagatc aaaataattt aaattcaggt
      181 ttagaaaaag cacaaagaaa caacaaccat aagcttgtga agaaaatggc gtttacagga
      241 actttagaaa aatgcaaggt ttgtgaaaag actgtttatt ttcttgaaat gatatccgct
      301 gatggaatta actatcatca aacatgcttc aaatgcagcc aatgtaacgg caagcttacg
      361 ataagcactt attcttcatt agaaggagta ttgttttgca agcctcattt tgaacaaaag
      421 ttcaaggaga gaggaggtct ccctaaagtc acacctgcca aaccacaaga accggggaaa
      481 gcccctagta aattagctgc tttgttttct gggacccaag ataaatgtgc agtttgtaaa
      541 aaaactgtgt atcctttaga aaaggttacc gtcgaaggag agttttacca taaagggtgt
      601 tttcgatgca ctcaaggagg ttgctttctt acgccatcta actacgcagc tttagatgga
      661 aacttatttt gtaagccaca tttctcccaa ctttttaagg agaaaggtag ttataatcat
      721 cttaaacaag ctgccaccat aaagaaagcc ggtggagcac ctactgaaga accatcagct
      781 gacaatcaag aacaatcaac ggaaaaagaa gaatcatcta ctacagaaga gacaactcgc
      841 gatgaagaag cagaagacta gaagtcaacg tcatgtgaaa atgaaatgaa ttcataacgg
      901 attcatgtta atttgtaaat tgttgaaagt agttataaaa attggaagtt acatttactt
      961 taatttgatc ttgaatttgt agatactgtt ctcgagttgt ttgtagtttt ttgagttaca
     1021 tgttttcaaa gtccataatg acatgttctt aatggaata
//
LOCUS       XM_071829879             517 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839736), mRNA.
ACCESSION   XM_071829879
VERSION     XM_071829879.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..517
                     /gene="LOC139839736"
                     /note="uncharacterized LOC139839736; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839736"
     CDS             6..371
                     /gene="LOC139839736"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685980.1"
                     /db_xref="GeneID:139839736"
                     /translation="MEKTVMEIHGMLKTAEANMAKAKPATTVLAIREGGIKKKKNKAK
                     GKDKGKGKVGTSNFKPKPKGIANSSTSKIPQTKSPEEAICFFCGDKGHWRRNCTKYLK
                     GLNELRAKGVAVPSGTHKK"
     misc_feature    <168..>296
                     /gene="LOC139839736"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]; Region:
                     COG5222"
                     /db_xref="CDD:227547"
ORIGIN      
        1 acaatatgga gaaaacagtc atggaaatcc atggcatgtt gaaaaccgct gaggctaaca
       61 tggccaaagc taaacccgca actaccgtct tagccattcg tgaaggtggg attaagaaga
      121 agaaaaacaa agcaaagggc aaagacaagg gcaagggtaa ggttggcacg tccaacttca
      181 aacctaaacc taagggcatt gctaactctt ctacttcaaa gatcccacaa accaagtctc
      241 ctgaagaagc aatatgcttc ttttgcgggg ataaaggaca ttggaggcgc aattgtacca
      301 agtacttgaa gggacttaat gaactacggg ctaagggagt cgccgtacct tcagggactc
      361 acaagaagta ggaaactgaa gaccggagag ctcaatctaa tcatggggaa taagaacgtt
      421 gcctctgttg acatgattgg agaatacaag ctttcttttg attctggttt atgtattgtt
      481 ttatctaatg tttgctacag tgccgaaatg gcaagaa
//
LOCUS       XM_071829880            2188 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides anthocyanidin
            3-O-glucosyltransferase 2-like (LOC139839737), mRNA.
ACCESSION   XM_071829880
VERSION     XM_071829880.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2188
                     /gene="LOC139839737"
                     /note="anthocyanidin 3-O-glucosyltransferase 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 20 Proteins"
                     /db_xref="GeneID:139839737"
     CDS             2..1465
                     /gene="LOC139839737"
                     /codon_start=1
                     /product="anthocyanidin 3-O-glucosyltransferase 2-like"
                     /protein_id="XP_071685981.1"
                     /db_xref="GeneID:139839737"
                     /translation="MANTVAKLIVIPAPGLGHIMSTVEIAKLLVNRDQRVSITVLVIK
                     PKSEGSGSAITTYIESLANNAMDRISFIELPQDETLPLFESKSKSPMISFTEFIKNQT
                     KYVRDVVGDMMNQPCSGQVVGFVIDVLCPSLMDVADEFEIPTYVFSTSNAAYLGFKLY
                     LQTLSDDQGQDVIEMMNSDTRISVPSFVKPVPTSAFPSLMRTKEGLDFTLWSIRKLRK
                     VKAILVNTFLELETHAIQSLSADVSVPFVYVVGPILNLEGGGAKKSDDDVISWLDNQP
                     PSSVVFLCFGSMGSFEETQVKEIAYALENSGSRFVWSLRRPPSKERRTIDTGDYEDPG
                     TVLPEGFLERTDGRGKVIGWAPQVTLLAHPAVGGFVSHCGWNSLLESLWFGVPIATWP
                     MYAEQQMNAFEMVEELGLAVKIKLDYKKDIFNHKDGTVIVTAEEIKCGIRELMGDNEV
                     RMKVKEMSEKSRAAVAEGGSSYASVGKFIRDITRNVS"
     misc_feature    order(17..19,95..97,368..370,1427..1432,1439..1441)
                     /gene="LOC139839737"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340817"
     misc_feature    23..1462
                     /gene="LOC139839737"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(50..55,59..61,521..523,560..565,575..577,659..661,
                     860..862,1115..1117,1121..1123,1127..1132,1139..1141)
                     /gene="LOC139839737"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(50..52,860..862,1115..1117,1121..1123,1127..1132)
                     /gene="LOC139839737"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    53..55
                     /gene="LOC139839737"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 aatggcaaat acagtagcaa agcttatagt catacctgct cctggacttg gtcatatcat
       61 gtcaaccgtc gagatcgcaa aactgctcgt gaatcgcgat caacgagtct ccataaccgt
      121 cctcgtcatc aagcctaaga gcgagggttc tggctcggct ataacaacct acatcgaatc
      181 gttagctaac aatgctatgg atcgtatatc cttcattgaa ctacctcaag atgaaaccct
      241 accattgttc gaatctaaat ctaaatcacc catgatttcc ttcacagaat tcatcaaaaa
      301 tcaaactaag tatgttagag atgttgtggg tgacatgatg aatcaaccat gttcgggtca
      361 ggttgtcggg tttgttattg atgtactttg cccctcgttg atggatgtgg cggatgagtt
      421 tgaaattcca acatatgtat ttagtacatc taatgctgct tatcttggat tcaaattata
      481 cttacagaca ctgagtgatg atcagggtca agatgttatc gagatgatga actcggatac
      541 tcgaatatcg gttccaagtt ttgtcaaacc ggtgccaacg agtgcgttcc cttcgcttat
      601 gcggactaaa gaagggttag actttacgct atggtctatt cgcaaattga gaaaggtcaa
      661 agcgatcttg gttaatacgt ttttggaatt ggagacgcac gcgatccagt cgttgtctgc
      721 tgacgtcagt gtcccgtttg tgtatgtagt gggacccata ctcaacctag aaggtggtgg
      781 tgcgaaaaaa tcagatgatg atgtcattag ctggttggac aatcaaccgc cttcgtcggt
      841 ggtgtttttg tgtttcggga gtatggggag tttcgaagag acgcaagtga aggagatcgc
      901 atatgcttta gagaacagtg ggtcccgttt cgtgtggtcc ctacgtcgac cgccttctaa
      961 agagcgtaga acaatagaca ccggggatta cgaggatccg ggaacagtat tgccggaggg
     1021 gtttcttgag cgtacggatg gaagaggaaa agtgatcggg tgggccccgc aagtgacgtt
     1081 attggcacac cctgcagttg gagggttcgt gtcacattgc gggtggaact cgttgttgga
     1141 gagtttatgg tttggtgtac caatagcaac atggccgatg tacgctgagc agcagatgaa
     1201 cgcttttgaa atggtggagg aattgggact ggctgtgaag attaagttgg attataagaa
     1261 ggatatattt aatcataaag atggtacggt tattgtaaca gcggaggaga taaaatgtgg
     1321 gataagggaa ttgatggggg ataacgaggt gagaatgaaa gtgaaagaaa tgagtgagaa
     1381 gagcagagcc gcagtggcag agggtggttc gtcttatgcg tctgttggca agtttatacg
     1441 tgacattaca agaaacgtat catgatgggt tcgacttgtg ttagtttttc agttactgaa
     1501 agttaacggt cttgttttca agcacttgtt tcaaacttcc tgttgtataa actgttaaca
     1561 tgacataatg tgacctgcag ccttgaaatt ctgataacaa gtagctgttt tttgtcaaca
     1621 tacaaacaat tcacatacat ttgattacag atgaatcatc caatgatatg taccattgat
     1681 acgacagttg tcagtggggt ttttagtcaa acaggtggtg ggcaacccag ttttggcatt
     1741 gtatgatatc tagttaagtt cgtgcaccaa taataatacg tagtagttac cagctgctct
     1801 taccagactc agaaaatatg gacgatcatg tgcatataca gatccagata ctactaatag
     1861 tactaccaga acttacacta caaagtacaa acccttatat ttacaattat catgtgtgac
     1921 actcagtcgt gaggaccctt taagaacggc atatatgata acgaggtgca agcatataac
     1981 aaagattgca tgctgtggct gctcttcaaa ccaagttcag tcttagtctt tttggctgga
     2041 caaaaacaat aaaattagta actacttctc acataaatta tcatcaaagc atgaaaacag
     2101 atctcaacta ctttaatcgc aagaagacat gagatataaa ttatgatgta cataaattgt
     2161 aaaccgcaca aatattattc gtcgtgaa
//
LOCUS       XM_071829881            1151 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At4g39620, chloroplastic-like
            (LOC139839738), transcript variant X1, mRNA.
ACCESSION   XM_071829881
VERSION     XM_071829881.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1151
                     /gene="LOC139839738"
                     /note="pentatricopeptide repeat-containing protein
                     At4g39620, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839738"
     CDS             70..825
                     /gene="LOC139839738"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At4g39620, chloroplastic-like isoform X1"
                     /protein_id="XP_071685982.1"
                     /db_xref="GeneID:139839738"
                     /translation="MAMNIYSSPMRNQFLQITSSDPFEINKIHFHLRYKTTTIITCGL
                     RKPLRTRRRSDGVLSTEAIQAVQSLKLAAKNQSKLDQVFNSKLNRLLKDDLLDAFAEL
                     QRQQHLDLALKVFEFMRKEAWYEPDHSLYGDLMLMFGKKKAIDKVERLFSELMEEGLK
                     PDTRTYTELIGAYLKVDMIDKAMETYELMKASGCTPDELTLTIMIRNLESAGRDELVA
                     IVKNDCAKYVDSPKTFLKEVARKYPKRLRLNLV"
     misc_feature    244..720
                     /gene="LOC139839738"
                     /note="Pentacotripeptide-repeat region of PRORP; Region:
                     PPR_long; pfam17177"
                     /db_xref="CDD:407303"
     misc_feature    352..432
                     /gene="LOC139839738"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    460..540
                     /gene="LOC139839738"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    550..693
                     /gene="LOC139839738"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    556..645
                     /gene="LOC139839738"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tgtgtaacac cagtttaact ttaaatcagc tgttctcgtt ctcataaaac cctactaaac
       61 cctaaataga tggcgatgaa catttattca tctccgatga gaaatcaatt tctacaaatt
      121 acttcttcag acccctttga aatcaataaa atccatttcc atttgagata taaaacaaca
      181 acaataatca cttgtggatt acgaaaaccg ttacgaacaa gaaggcgtag tgacggtgtt
      241 ttgtcaacag aagcaataca agctgttcaa tcactcaaat tagctgccaa aaatcaatct
      301 aaattagatc aggtattcaa ttcaaagctt aatcgtctct taaaagatga tttattggat
      361 gcttttgctg aactgcagag gcaacaacac ttggaccttg ctctcaaggt gtttgaattt
      421 atgaggaagg aagcatggta tgaaccagat cactcattgt atggtgattt aatgttaatg
      481 tttgggaaga agaaagcaat agataaagtc gaaagacttt tctctgagct aatggaagaa
      541 ggcctaaaac ctgacacccg aacctatact gaactaattg gagcatacct caaagtggat
      601 atgatagaca aggcaatgga aacatatgag ttgatgaaag catcaggttg cactccagac
      661 gagttgacct taacgatcat gataagaaat cttgaaagtg ctggccgaga cgagcttgtt
      721 gcaattgtaa agaatgattg tgctaaatat gtggattctc caaagacgtt tctcaaggaa
      781 gttgctagaa aatatccaaa aagactaaga ctgaacttgg tttgaagagc agccacagca
      841 tgcaatcttt gttatatgct tgcacctcgt tatcatatat gccgttctta aagggtcctc
      901 acgactgagt gtcacacatg ataattgtaa atataagggt ttgtactttg tagtgtaagt
      961 tctggtagta ctattagtag tatctggatc tgtatatgca catgatcgtc catattttct
     1021 gagtctggta agagcagctg gtaactacta cgtattatta ttggtgcacg aacttaacta
     1081 gatatcatac aatgccaaaa ctgggttgcc caccacctgt ttgactaaaa accccactga
     1141 caactgtcgt a
//
LOCUS       XM_071829882            1085 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At4g39620, chloroplastic-like
            (LOC139839738), transcript variant X2, mRNA.
ACCESSION   XM_071829882
VERSION     XM_071829882.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1085
                     /gene="LOC139839738"
                     /note="pentatricopeptide repeat-containing protein
                     At4g39620, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839738"
     CDS             70..759
                     /gene="LOC139839738"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071685983.1"
                     /db_xref="GeneID:139839738"
                     /translation="MAMNIYSSPMRNQFLQITSSDPFEINKIHFHLRYKTTTIITCGL
                     RKPLRTRRRSDGVLSTEAIQAVQSLKLAAKNQSKLDQRQQHLDLALKVFEFMRKEAWY
                     EPDHSLYGDLMLMFGKKKAIDKVERLFSELMEEGLKPDTRTYTELIGAYLKVDMIDKA
                     METYELMKASGCTPDELTLTIMIRNLESAGRDELVAIVKNDCAKYVDSPKTFLKEVAR
                     KYPKRLRLNLV"
     misc_feature    <310..654
                     /gene="LOC139839738"
                     /note="Pentacotripeptide-repeat region of PRORP; Region:
                     PPR_long; pfam17177"
                     /db_xref="CDD:407303"
     misc_feature    394..474
                     /gene="LOC139839738"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    484..627
                     /gene="LOC139839738"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    490..579
                     /gene="LOC139839738"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tgtgtaacac cagtttaact ttaaatcagc tgttctcgtt ctcataaaac cctactaaac
       61 cctaaataga tggcgatgaa catttattca tctccgatga gaaatcaatt tctacaaatt
      121 acttcttcag acccctttga aatcaataaa atccatttcc atttgagata taaaacaaca
      181 acaataatca cttgtggatt acgaaaaccg ttacgaacaa gaaggcgtag tgacggtgtt
      241 ttgtcaacag aagcaataca agctgttcaa tcactcaaat tagctgccaa aaatcaatct
      301 aaattagatc agaggcaaca acacttggac cttgctctca aggtgtttga atttatgagg
      361 aaggaagcat ggtatgaacc agatcactca ttgtatggtg atttaatgtt aatgtttggg
      421 aagaagaaag caatagataa agtcgaaaga cttttctctg agctaatgga agaaggccta
      481 aaacctgaca cccgaaccta tactgaacta attggagcat acctcaaagt ggatatgata
      541 gacaaggcaa tggaaacata tgagttgatg aaagcatcag gttgcactcc agacgagttg
      601 accttaacga tcatgataag aaatcttgaa agtgctggcc gagacgagct tgttgcaatt
      661 gtaaagaatg attgtgctaa atatgtggat tctccaaaga cgtttctcaa ggaagttgct
      721 agaaaatatc caaaaagact aagactgaac ttggtttgaa gagcagccac agcatgcaat
      781 ctttgttata tgcttgcacc tcgttatcat atatgccgtt cttaaagggt cctcacgact
      841 gagtgtcaca catgataatt gtaaatataa gggtttgtac tttgtagtgt aagttctggt
      901 agtactatta gtagtatctg gatctgtata tgcacatgat cgtccatatt ttctgagtct
      961 ggtaagagca gctggtaact actacgtatt attattggtg cacgaactta actagatatc
     1021 atacaatgcc aaaactgggt tgcccaccac ctgtttgact aaaaacccca ctgacaactg
     1081 tcgta
//
LOCUS       XM_071829883            3436 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NLP9-like
            (LOC139839740), transcript variant X1, mRNA.
ACCESSION   XM_071829883
VERSION     XM_071829883.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3436
                     /gene="LOC139839740"
                     /note="protein NLP9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839740"
     CDS             187..2862
                     /gene="LOC139839740"
                     /codon_start=1
                     /product="protein NLP9-like"
                     /protein_id="XP_071685984.1"
                     /db_xref="GeneID:139839740"
                     /translation="MEYNSPSKDKSNGFWASPRAQMDNSVPDDPFNGFSEIMNFDTYA
                     GWCNSPSTPDQMLAAFALSNSYPMYDLGNFPEQVRTGFVNTDVEIAQNSVDNGEFGLP
                     SEERESQGNDIVCRPLQVRSLAEKMLKALSFFKDSSGGGILAQVWVPIKEGDKYVLST
                     CEQPYLLDQVLGGYREVSRGFTFSADVKPGHFQGLPGRVFTSKVPEWTSNVAHYSKGE
                     YLRIDHARSHEVRGSIAVPVFEDDNYEKSCCAVLELVTTKEKSDFNAEMNHVCRALET
                     VNLKSVATPQLNKQCLSKNQMAALAEISNVLRAVCHAHRLPVALTWIPCSYNKGVGDE
                     VIKVRVGGCNTNPTEKVVLYVQTDACYVNEQKMQGFVQACSEHHLEEGQGIAGKALQS
                     NHPFFLPDVKDYHINEYPLVQHARKYGLNAAVAIRLRSTFTGDDDYILEFFLPVNMKG
                     CTEQQLLLNNLSSTMQRICRSLRTVSDTELSGVVGPNVEFHMGLDESRLLLNHADQIS
                     VKETESVDVRMGPSPPDQLVGGSKRQSEKKRSSAEKNVSLSVLQQYFSGSLKDAAKAI
                     GVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPATGGLV
                     AANTVTQDLDAQKSSMLSNNSTEVASQHPQPSSCFNTESLKLEDECNVGVDELRSSNS
                     LPIPITTSMGGYCIDKWSPVDGQLKVEKSNRLYSSHSSSSLGAGDDMDTSMNDNDVID
                     GYDNDHNQSTSSSMTDSSNGSTMNGSSTSSPSFSGLKNSKTERFNGDEGSKLTVKATY
                     KEDTVRFKFEPSSGWFHLYEEVAKRFKIQTGTFQLKYKDDEEEWVLLVCESDWRECVE
                     ILESSGTRIVKFLVRDATFGMGSSGSSNCFLIGSS"
     misc_feature    1819..1965
                     /gene="LOC139839740"
                     /note="RWP-RK domain; Region: RWP-RK; pfam02042"
                     /db_xref="CDD:460427"
     misc_feature    2560..2802
                     /gene="LOC139839740"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; Region: PB1_NLP;
                     cd06407"
                     /db_xref="CDD:99728"
ORIGIN      
        1 ccctcttttg tcaacttcct cattcattcg tcatctgttt cgtcatcctt gttttcttta
       61 gccgattaaa ctcagattcc attcctcctt catagtatct tcatcccaga gatgaattga
      121 atttgtgctt ttgatacaaa ttagggttga taacatatga tagggatttt aggttagttt
      181 tgagttatgg agtacaattc accgtctaaa gataaatcta acggtttttg ggcctcaccg
      241 cgagctcaga tggataattc ggtaccagac gatccgttta atggtttttc ggagattatg
      301 aactttgata cttatgctgg atggtgtaat agtccttcaa cacctgatca gatgttagct
      361 gcttttgctt tatcaaacag ttaccctatg tatgatttag gaaacttccc tgaacaagtt
      421 agaaccggtt ttgtgaatac tgatgttgaa atcgcgcaga attcggttga taatggtgaa
      481 tttggtttac ctagtgaaga aagagagagt cagggaaacg atattgtttg taggcctctg
      541 caggtacgat cacttgctga gaagatgttg aaagcgttgt cattttttaa ggattcgtct
      601 ggagggggca ttttggcgca agtttgggtt ccgattaagg aaggtgataa gtacgtgttg
      661 agtacttgtg agcagcctta tttgcttgac caagtgttgg gtggataccg tgaagtgtct
      721 agaggattta cattttctgc ggatgtgaaa ccgggtcatt ttcaagggtt accgggtcgg
      781 gtttttacct caaaagtacc agaatggact tctaatgtgg ctcattatag taaaggtgag
      841 tacttgcgga tagatcatgc gcgtagtcat gaagtgcgtg gatctattgc tgtaccggtt
      901 tttgaagatg ataattatga gaaatcttgc tgtgcggtgc ttgaacttgt tacaacgaaa
      961 gagaaatctg atttcaatgc ggagatgaat catgtttgcc gtgcacttga gactgtgaac
     1021 cttaaaagtg ttgcaactcc tcaacttaat aaacagtgcc tttcgaaaaa tcaaatggct
     1081 gctttagctg aaatatcgaa tgtgcttcga gctgtatgcc atgcacatag attaccagtt
     1141 gctttaacat ggataccatg tagttataac aaaggtgttg gtgatgaagt tataaaagta
     1201 cgggttggag ggtgtaatac caacccaaca gagaaagttg tattatatgt ccaaacggat
     1261 gcttgttatg tcaatgaaca aaagatgcaa ggttttgtac aagcttgtag cgagcatcat
     1321 ctcgaagaag gacagggtat tgcaggaaaa gcacttcagt cgaatcatcc gtttttctta
     1381 cccgatgtaa aagattacca tataaacgag tacccacttg tgcaacatgc tcgtaaatat
     1441 ggcttgaatg ctgctgtagc aatcaggctg aggagcacgt ttactggtga tgatgattat
     1501 atattggagt tttttcttcc tgttaacatg aaaggttgta cagagcagca acttttgttg
     1561 aataatttat cgagtacgat gcagaggatt tgtagaagtt tgaggactgt ttctgatact
     1621 gaattgtctg gtgtggtggg acccaatgtt gaattccata tgggattaga tgaaagcagg
     1681 ctgcttttga atcatgctga tcaaatttct gtaaaagaaa ctgaatcagt ggatgttagg
     1741 atgggaccaa gtccacctga tcagctggtt ggtggatcaa agagacaatc cgagaaaaag
     1801 cgaagttctg cagagaagaa tgttagctta agtgtactac aacaatactt ttctgggagc
     1861 cttaaagatg ctgcaaaagc cattggagtt tgtcctacta cactaaaaag gatatgcaga
     1921 caacatggta tttcgagatg gccatcacgc aagattaaca aggtaaatcg ttctctaaag
     1981 aagatacaga cggttctcga ctctgtacaa ggcgtggaag gaggtttaaa attcgacccc
     2041 gcgacaggtg gacttgtagc tgcaaacacc gtcacccaag atcttgatgc acaaaaaagt
     2101 tcaatgcttt caaataatag caccgaagtt gcatcacaac atcctcaacc atcatcatgc
     2161 tttaataccg aaagtctaaa attagaggat gaatgtaatg ttggagtgga cgaattaaga
     2221 tcatctaata gcctcccgat tccaattaca acttctatgg gtggatattg tattgataaa
     2281 tggagtccag ttgatggtca actgaaagta gaaaagtcaa accgccttta ttcgtcgcat
     2341 agctcgagtt ccttgggtgc tggtgatgac atggacacat caatgaatga caatgatgtc
     2401 atcgatggtt atgataatga tcataaccag tcaacttctt ccagcatgac agattcatca
     2461 aatgggtcaa cgatgaatgg aagttcaacg agctctccaa gcttcagtgg tctgaaaaac
     2521 tcgaaaacag aaaggtttaa tggggatgaa ggatcgaaac taactgtaaa agctacatac
     2581 aaagaagata cagttaggtt taagtttgag ccttcatctg gttggtttca tctttatgaa
     2641 gaagttgcaa aaaggtttaa aatacaaaca gggacgttcc agctcaagta caaggacgat
     2701 gaagaggaat gggtattgtt ggtttgcgaa tctgattgga gggagtgtgt tgaaattttg
     2761 gaatcttctg ggacccgcat tgtgaagttt cttgttcgtg atgctacttt tggtatggga
     2821 agctcaggca gtagcaattg tttcctaatc gggagttctt gacgtcctac tgttggtgtg
     2881 agcgagctgt gacccgtttg aggtaaagtg ggtacacctg ttttttttgt ctgcttttca
     2941 ataaattgtt gttctcgtgt cattgcttct tcctgtctga agagcttaaa ggagttgatt
     3001 ttgttgacat caaggagtgg ggaagcttga gctttagatg gtttgaacaa tctgtataat
     3061 ggtaatggtg tttgttacag gtataggtat gggaaaaaaa aagatgggag tagttagtta
     3121 ttttaatttt acagttggaa tttggaaaga tgttttttat gtggactatt ttgttaaagc
     3181 aaatggtaaa aattgtagaa atattttggt tacaagagca ttgtactctt ctaacataca
     3241 atgtacaaat agtatcacat aaagtataaa caatataaag catgtgggtt ccatttttct
     3301 aagagatctt cgtcaaatcc atggtgaacc taagagagaa ttcggtgctt atcatggcga
     3361 gcagacggcg attgccatgt cacctcggcg agtttgcatg gctagataca ggcagtggtc
     3421 taagtttcaa tatatt
//
LOCUS       XM_071829884            3398 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NLP9-like
            (LOC139839740), transcript variant X2, mRNA.
ACCESSION   XM_071829884
VERSION     XM_071829884.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3398
                     /gene="LOC139839740"
                     /note="protein NLP9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839740"
     CDS             149..2824
                     /gene="LOC139839740"
                     /codon_start=1
                     /product="protein NLP9-like"
                     /protein_id="XP_071685985.1"
                     /db_xref="GeneID:139839740"
                     /translation="MEYNSPSKDKSNGFWASPRAQMDNSVPDDPFNGFSEIMNFDTYA
                     GWCNSPSTPDQMLAAFALSNSYPMYDLGNFPEQVRTGFVNTDVEIAQNSVDNGEFGLP
                     SEERESQGNDIVCRPLQVRSLAEKMLKALSFFKDSSGGGILAQVWVPIKEGDKYVLST
                     CEQPYLLDQVLGGYREVSRGFTFSADVKPGHFQGLPGRVFTSKVPEWTSNVAHYSKGE
                     YLRIDHARSHEVRGSIAVPVFEDDNYEKSCCAVLELVTTKEKSDFNAEMNHVCRALET
                     VNLKSVATPQLNKQCLSKNQMAALAEISNVLRAVCHAHRLPVALTWIPCSYNKGVGDE
                     VIKVRVGGCNTNPTEKVVLYVQTDACYVNEQKMQGFVQACSEHHLEEGQGIAGKALQS
                     NHPFFLPDVKDYHINEYPLVQHARKYGLNAAVAIRLRSTFTGDDDYILEFFLPVNMKG
                     CTEQQLLLNNLSSTMQRICRSLRTVSDTELSGVVGPNVEFHMGLDESRLLLNHADQIS
                     VKETESVDVRMGPSPPDQLVGGSKRQSEKKRSSAEKNVSLSVLQQYFSGSLKDAAKAI
                     GVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPATGGLV
                     AANTVTQDLDAQKSSMLSNNSTEVASQHPQPSSCFNTESLKLEDECNVGVDELRSSNS
                     LPIPITTSMGGYCIDKWSPVDGQLKVEKSNRLYSSHSSSSLGAGDDMDTSMNDNDVID
                     GYDNDHNQSTSSSMTDSSNGSTMNGSSTSSPSFSGLKNSKTERFNGDEGSKLTVKATY
                     KEDTVRFKFEPSSGWFHLYEEVAKRFKIQTGTFQLKYKDDEEEWVLLVCESDWRECVE
                     ILESSGTRIVKFLVRDATFGMGSSGSSNCFLIGSS"
     misc_feature    1781..1927
                     /gene="LOC139839740"
                     /note="RWP-RK domain; Region: RWP-RK; pfam02042"
                     /db_xref="CDD:460427"
     misc_feature    2522..2764
                     /gene="LOC139839740"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; Region: PB1_NLP;
                     cd06407"
                     /db_xref="CDD:99728"
ORIGIN      
        1 attattcgta ttatatatca ctatatcatt gatgttgttg ttgttgtatt tgtttctggt
       61 taatgaaaca gagatgaatt gaatttgtgc ttttgataca aattagggtt gataacatat
      121 gatagggatt ttaggttagt tttgagttat ggagtacaat tcaccgtcta aagataaatc
      181 taacggtttt tgggcctcac cgcgagctca gatggataat tcggtaccag acgatccgtt
      241 taatggtttt tcggagatta tgaactttga tacttatgct ggatggtgta atagtccttc
      301 aacacctgat cagatgttag ctgcttttgc tttatcaaac agttacccta tgtatgattt
      361 aggaaacttc cctgaacaag ttagaaccgg ttttgtgaat actgatgttg aaatcgcgca
      421 gaattcggtt gataatggtg aatttggttt acctagtgaa gaaagagaga gtcagggaaa
      481 cgatattgtt tgtaggcctc tgcaggtacg atcacttgct gagaagatgt tgaaagcgtt
      541 gtcatttttt aaggattcgt ctggaggggg cattttggcg caagtttggg ttccgattaa
      601 ggaaggtgat aagtacgtgt tgagtacttg tgagcagcct tatttgcttg accaagtgtt
      661 gggtggatac cgtgaagtgt ctagaggatt tacattttct gcggatgtga aaccgggtca
      721 ttttcaaggg ttaccgggtc gggtttttac ctcaaaagta ccagaatgga cttctaatgt
      781 ggctcattat agtaaaggtg agtacttgcg gatagatcat gcgcgtagtc atgaagtgcg
      841 tggatctatt gctgtaccgg tttttgaaga tgataattat gagaaatctt gctgtgcggt
      901 gcttgaactt gttacaacga aagagaaatc tgatttcaat gcggagatga atcatgtttg
      961 ccgtgcactt gagactgtga accttaaaag tgttgcaact cctcaactta ataaacagtg
     1021 cctttcgaaa aatcaaatgg ctgctttagc tgaaatatcg aatgtgcttc gagctgtatg
     1081 ccatgcacat agattaccag ttgctttaac atggatacca tgtagttata acaaaggtgt
     1141 tggtgatgaa gttataaaag tacgggttgg agggtgtaat accaacccaa cagagaaagt
     1201 tgtattatat gtccaaacgg atgcttgtta tgtcaatgaa caaaagatgc aaggttttgt
     1261 acaagcttgt agcgagcatc atctcgaaga aggacagggt attgcaggaa aagcacttca
     1321 gtcgaatcat ccgtttttct tacccgatgt aaaagattac catataaacg agtacccact
     1381 tgtgcaacat gctcgtaaat atggcttgaa tgctgctgta gcaatcaggc tgaggagcac
     1441 gtttactggt gatgatgatt atatattgga gttttttctt cctgttaaca tgaaaggttg
     1501 tacagagcag caacttttgt tgaataattt atcgagtacg atgcagagga tttgtagaag
     1561 tttgaggact gtttctgata ctgaattgtc tggtgtggtg ggacccaatg ttgaattcca
     1621 tatgggatta gatgaaagca ggctgctttt gaatcatgct gatcaaattt ctgtaaaaga
     1681 aactgaatca gtggatgtta ggatgggacc aagtccacct gatcagctgg ttggtggatc
     1741 aaagagacaa tccgagaaaa agcgaagttc tgcagagaag aatgttagct taagtgtact
     1801 acaacaatac ttttctggga gccttaaaga tgctgcaaaa gccattggag tttgtcctac
     1861 tacactaaaa aggatatgca gacaacatgg tatttcgaga tggccatcac gcaagattaa
     1921 caaggtaaat cgttctctaa agaagataca gacggttctc gactctgtac aaggcgtgga
     1981 aggaggttta aaattcgacc ccgcgacagg tggacttgta gctgcaaaca ccgtcaccca
     2041 agatcttgat gcacaaaaaa gttcaatgct ttcaaataat agcaccgaag ttgcatcaca
     2101 acatcctcaa ccatcatcat gctttaatac cgaaagtcta aaattagagg atgaatgtaa
     2161 tgttggagtg gacgaattaa gatcatctaa tagcctcccg attccaatta caacttctat
     2221 gggtggatat tgtattgata aatggagtcc agttgatggt caactgaaag tagaaaagtc
     2281 aaaccgcctt tattcgtcgc atagctcgag ttccttgggt gctggtgatg acatggacac
     2341 atcaatgaat gacaatgatg tcatcgatgg ttatgataat gatcataacc agtcaacttc
     2401 ttccagcatg acagattcat caaatgggtc aacgatgaat ggaagttcaa cgagctctcc
     2461 aagcttcagt ggtctgaaaa actcgaaaac agaaaggttt aatggggatg aaggatcgaa
     2521 actaactgta aaagctacat acaaagaaga tacagttagg tttaagtttg agccttcatc
     2581 tggttggttt catctttatg aagaagttgc aaaaaggttt aaaatacaaa cagggacgtt
     2641 ccagctcaag tacaaggacg atgaagagga atgggtattg ttggtttgcg aatctgattg
     2701 gagggagtgt gttgaaattt tggaatcttc tgggacccgc attgtgaagt ttcttgttcg
     2761 tgatgctact tttggtatgg gaagctcagg cagtagcaat tgtttcctaa tcgggagttc
     2821 ttgacgtcct actgttggtg tgagcgagct gtgacccgtt tgaggtaaag tgggtacacc
     2881 tgtttttttt gtctgctttt caataaattg ttgttctcgt gtcattgctt cttcctgtct
     2941 gaagagctta aaggagttga ttttgttgac atcaaggagt ggggaagctt gagctttaga
     3001 tggtttgaac aatctgtata atggtaatgg tgtttgttac aggtataggt atgggaaaaa
     3061 aaaagatggg agtagttagt tattttaatt ttacagttgg aatttggaaa gatgtttttt
     3121 atgtggacta ttttgttaaa gcaaatggta aaaattgtag aaatattttg gttacaagag
     3181 cattgtactc ttctaacata caatgtacaa atagtatcac ataaagtata aacaatataa
     3241 agcatgtggg ttccattttt ctaagagatc ttcgtcaaat ccatggtgaa cctaagagag
     3301 aattcggtgc ttatcatggc gagcagacgg cgattgccat gtcacctcgg cgagtttgca
     3361 tggctagata caggcagtgg tctaagtttc aatatatt
//
LOCUS       XM_071829885            3376 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NLP9-like
            (LOC139839740), transcript variant X3, mRNA.
ACCESSION   XM_071829885
VERSION     XM_071829885.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3376
                     /gene="LOC139839740"
                     /note="protein NLP9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839740"
     CDS             127..2802
                     /gene="LOC139839740"
                     /codon_start=1
                     /product="protein NLP9-like"
                     /protein_id="XP_071685986.1"
                     /db_xref="GeneID:139839740"
                     /translation="MEYNSPSKDKSNGFWASPRAQMDNSVPDDPFNGFSEIMNFDTYA
                     GWCNSPSTPDQMLAAFALSNSYPMYDLGNFPEQVRTGFVNTDVEIAQNSVDNGEFGLP
                     SEERESQGNDIVCRPLQVRSLAEKMLKALSFFKDSSGGGILAQVWVPIKEGDKYVLST
                     CEQPYLLDQVLGGYREVSRGFTFSADVKPGHFQGLPGRVFTSKVPEWTSNVAHYSKGE
                     YLRIDHARSHEVRGSIAVPVFEDDNYEKSCCAVLELVTTKEKSDFNAEMNHVCRALET
                     VNLKSVATPQLNKQCLSKNQMAALAEISNVLRAVCHAHRLPVALTWIPCSYNKGVGDE
                     VIKVRVGGCNTNPTEKVVLYVQTDACYVNEQKMQGFVQACSEHHLEEGQGIAGKALQS
                     NHPFFLPDVKDYHINEYPLVQHARKYGLNAAVAIRLRSTFTGDDDYILEFFLPVNMKG
                     CTEQQLLLNNLSSTMQRICRSLRTVSDTELSGVVGPNVEFHMGLDESRLLLNHADQIS
                     VKETESVDVRMGPSPPDQLVGGSKRQSEKKRSSAEKNVSLSVLQQYFSGSLKDAAKAI
                     GVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPATGGLV
                     AANTVTQDLDAQKSSMLSNNSTEVASQHPQPSSCFNTESLKLEDECNVGVDELRSSNS
                     LPIPITTSMGGYCIDKWSPVDGQLKVEKSNRLYSSHSSSSLGAGDDMDTSMNDNDVID
                     GYDNDHNQSTSSSMTDSSNGSTMNGSSTSSPSFSGLKNSKTERFNGDEGSKLTVKATY
                     KEDTVRFKFEPSSGWFHLYEEVAKRFKIQTGTFQLKYKDDEEEWVLLVCESDWRECVE
                     ILESSGTRIVKFLVRDATFGMGSSGSSNCFLIGSS"
     misc_feature    1759..1905
                     /gene="LOC139839740"
                     /note="RWP-RK domain; Region: RWP-RK; pfam02042"
                     /db_xref="CDD:460427"
     misc_feature    2500..2742
                     /gene="LOC139839740"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; Region: PB1_NLP;
                     cd06407"
                     /db_xref="CDD:99728"
ORIGIN      
        1 attcgtcatc tgtttcgtca tccttgtttt ctttagccga ttaaactcag attccattcc
       61 tccttcatag tatcttcatc ccagggttga taacatatga tagggatttt aggttagttt
      121 tgagttatgg agtacaattc accgtctaaa gataaatcta acggtttttg ggcctcaccg
      181 cgagctcaga tggataattc ggtaccagac gatccgttta atggtttttc ggagattatg
      241 aactttgata cttatgctgg atggtgtaat agtccttcaa cacctgatca gatgttagct
      301 gcttttgctt tatcaaacag ttaccctatg tatgatttag gaaacttccc tgaacaagtt
      361 agaaccggtt ttgtgaatac tgatgttgaa atcgcgcaga attcggttga taatggtgaa
      421 tttggtttac ctagtgaaga aagagagagt cagggaaacg atattgtttg taggcctctg
      481 caggtacgat cacttgctga gaagatgttg aaagcgttgt cattttttaa ggattcgtct
      541 ggagggggca ttttggcgca agtttgggtt ccgattaagg aaggtgataa gtacgtgttg
      601 agtacttgtg agcagcctta tttgcttgac caagtgttgg gtggataccg tgaagtgtct
      661 agaggattta cattttctgc ggatgtgaaa ccgggtcatt ttcaagggtt accgggtcgg
      721 gtttttacct caaaagtacc agaatggact tctaatgtgg ctcattatag taaaggtgag
      781 tacttgcgga tagatcatgc gcgtagtcat gaagtgcgtg gatctattgc tgtaccggtt
      841 tttgaagatg ataattatga gaaatcttgc tgtgcggtgc ttgaacttgt tacaacgaaa
      901 gagaaatctg atttcaatgc ggagatgaat catgtttgcc gtgcacttga gactgtgaac
      961 cttaaaagtg ttgcaactcc tcaacttaat aaacagtgcc tttcgaaaaa tcaaatggct
     1021 gctttagctg aaatatcgaa tgtgcttcga gctgtatgcc atgcacatag attaccagtt
     1081 gctttaacat ggataccatg tagttataac aaaggtgttg gtgatgaagt tataaaagta
     1141 cgggttggag ggtgtaatac caacccaaca gagaaagttg tattatatgt ccaaacggat
     1201 gcttgttatg tcaatgaaca aaagatgcaa ggttttgtac aagcttgtag cgagcatcat
     1261 ctcgaagaag gacagggtat tgcaggaaaa gcacttcagt cgaatcatcc gtttttctta
     1321 cccgatgtaa aagattacca tataaacgag tacccacttg tgcaacatgc tcgtaaatat
     1381 ggcttgaatg ctgctgtagc aatcaggctg aggagcacgt ttactggtga tgatgattat
     1441 atattggagt tttttcttcc tgttaacatg aaaggttgta cagagcagca acttttgttg
     1501 aataatttat cgagtacgat gcagaggatt tgtagaagtt tgaggactgt ttctgatact
     1561 gaattgtctg gtgtggtggg acccaatgtt gaattccata tgggattaga tgaaagcagg
     1621 ctgcttttga atcatgctga tcaaatttct gtaaaagaaa ctgaatcagt ggatgttagg
     1681 atgggaccaa gtccacctga tcagctggtt ggtggatcaa agagacaatc cgagaaaaag
     1741 cgaagttctg cagagaagaa tgttagctta agtgtactac aacaatactt ttctgggagc
     1801 cttaaagatg ctgcaaaagc cattggagtt tgtcctacta cactaaaaag gatatgcaga
     1861 caacatggta tttcgagatg gccatcacgc aagattaaca aggtaaatcg ttctctaaag
     1921 aagatacaga cggttctcga ctctgtacaa ggcgtggaag gaggtttaaa attcgacccc
     1981 gcgacaggtg gacttgtagc tgcaaacacc gtcacccaag atcttgatgc acaaaaaagt
     2041 tcaatgcttt caaataatag caccgaagtt gcatcacaac atcctcaacc atcatcatgc
     2101 tttaataccg aaagtctaaa attagaggat gaatgtaatg ttggagtgga cgaattaaga
     2161 tcatctaata gcctcccgat tccaattaca acttctatgg gtggatattg tattgataaa
     2221 tggagtccag ttgatggtca actgaaagta gaaaagtcaa accgccttta ttcgtcgcat
     2281 agctcgagtt ccttgggtgc tggtgatgac atggacacat caatgaatga caatgatgtc
     2341 atcgatggtt atgataatga tcataaccag tcaacttctt ccagcatgac agattcatca
     2401 aatgggtcaa cgatgaatgg aagttcaacg agctctccaa gcttcagtgg tctgaaaaac
     2461 tcgaaaacag aaaggtttaa tggggatgaa ggatcgaaac taactgtaaa agctacatac
     2521 aaagaagata cagttaggtt taagtttgag ccttcatctg gttggtttca tctttatgaa
     2581 gaagttgcaa aaaggtttaa aatacaaaca gggacgttcc agctcaagta caaggacgat
     2641 gaagaggaat gggtattgtt ggtttgcgaa tctgattgga gggagtgtgt tgaaattttg
     2701 gaatcttctg ggacccgcat tgtgaagttt cttgttcgtg atgctacttt tggtatggga
     2761 agctcaggca gtagcaattg tttcctaatc gggagttctt gacgtcctac tgttggtgtg
     2821 agcgagctgt gacccgtttg aggtaaagtg ggtacacctg ttttttttgt ctgcttttca
     2881 ataaattgtt gttctcgtgt cattgcttct tcctgtctga agagcttaaa ggagttgatt
     2941 ttgttgacat caaggagtgg ggaagcttga gctttagatg gtttgaacaa tctgtataat
     3001 ggtaatggtg tttgttacag gtataggtat gggaaaaaaa aagatgggag tagttagtta
     3061 ttttaatttt acagttggaa tttggaaaga tgttttttat gtggactatt ttgttaaagc
     3121 aaatggtaaa aattgtagaa atattttggt tacaagagca ttgtactctt ctaacataca
     3181 atgtacaaat agtatcacat aaagtataaa caatataaag catgtgggtt ccatttttct
     3241 aagagatctt cgtcaaatcc atggtgaacc taagagagaa ttcggtgctt atcatggcga
     3301 gcagacggcg attgccatgt cacctcggcg agtttgcatg gctagataca ggcagtggtc
     3361 taagtttcaa tatatt
//
LOCUS       XM_071829886            3359 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NLP9-like
            (LOC139839740), transcript variant X4, mRNA.
ACCESSION   XM_071829886
VERSION     XM_071829886.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3359
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3359
                     /gene="LOC139839740"
                     /note="protein NLP9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839740"
     CDS             187..2862
                     /gene="LOC139839740"
                     /codon_start=1
                     /product="protein NLP9-like"
                     /protein_id="XP_071685987.1"
                     /db_xref="GeneID:139839740"
                     /translation="MEYNSPSKDKSNGFWASPRAQMDNSVPDDPFNGFSEIMNFDTYA
                     GWCNSPSTPDQMLAAFALSNSYPMYDLGNFPEQVRTGFVNTDVEIAQNSVDNGEFGLP
                     SEERESQGNDIVCRPLQVRSLAEKMLKALSFFKDSSGGGILAQVWVPIKEGDKYVLST
                     CEQPYLLDQVLGGYREVSRGFTFSADVKPGHFQGLPGRVFTSKVPEWTSNVAHYSKGE
                     YLRIDHARSHEVRGSIAVPVFEDDNYEKSCCAVLELVTTKEKSDFNAEMNHVCRALET
                     VNLKSVATPQLNKQCLSKNQMAALAEISNVLRAVCHAHRLPVALTWIPCSYNKGVGDE
                     VIKVRVGGCNTNPTEKVVLYVQTDACYVNEQKMQGFVQACSEHHLEEGQGIAGKALQS
                     NHPFFLPDVKDYHINEYPLVQHARKYGLNAAVAIRLRSTFTGDDDYILEFFLPVNMKG
                     CTEQQLLLNNLSSTMQRICRSLRTVSDTELSGVVGPNVEFHMGLDESRLLLNHADQIS
                     VKETESVDVRMGPSPPDQLVGGSKRQSEKKRSSAEKNVSLSVLQQYFSGSLKDAAKAI
                     GVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPATGGLV
                     AANTVTQDLDAQKSSMLSNNSTEVASQHPQPSSCFNTESLKLEDECNVGVDELRSSNS
                     LPIPITTSMGGYCIDKWSPVDGQLKVEKSNRLYSSHSSSSLGAGDDMDTSMNDNDVID
                     GYDNDHNQSTSSSMTDSSNGSTMNGSSTSSPSFSGLKNSKTERFNGDEGSKLTVKATY
                     KEDTVRFKFEPSSGWFHLYEEVAKRFKIQTGTFQLKYKDDEEEWVLLVCESDWRECVE
                     ILESSGTRIVKFLVRDATFGMGSSGSSNCFLIGSS"
     misc_feature    1819..1965
                     /gene="LOC139839740"
                     /note="RWP-RK domain; Region: RWP-RK; pfam02042"
                     /db_xref="CDD:460427"
     misc_feature    2560..2802
                     /gene="LOC139839740"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; Region: PB1_NLP;
                     cd06407"
                     /db_xref="CDD:99728"
ORIGIN      
        1 ccctcttttg tcaacttcct cattcattcg tcatctgttt cgtcatcctt gttttcttta
       61 gccgattaaa ctcagattcc attcctcctt catagtatct tcatcccaga gatgaattga
      121 atttgtgctt ttgatacaaa ttagggttga taacatatga tagggatttt aggttagttt
      181 tgagttatgg agtacaattc accgtctaaa gataaatcta acggtttttg ggcctcaccg
      241 cgagctcaga tggataattc ggtaccagac gatccgttta atggtttttc ggagattatg
      301 aactttgata cttatgctgg atggtgtaat agtccttcaa cacctgatca gatgttagct
      361 gcttttgctt tatcaaacag ttaccctatg tatgatttag gaaacttccc tgaacaagtt
      421 agaaccggtt ttgtgaatac tgatgttgaa atcgcgcaga attcggttga taatggtgaa
      481 tttggtttac ctagtgaaga aagagagagt cagggaaacg atattgtttg taggcctctg
      541 caggtacgat cacttgctga gaagatgttg aaagcgttgt cattttttaa ggattcgtct
      601 ggagggggca ttttggcgca agtttgggtt ccgattaagg aaggtgataa gtacgtgttg
      661 agtacttgtg agcagcctta tttgcttgac caagtgttgg gtggataccg tgaagtgtct
      721 agaggattta cattttctgc ggatgtgaaa ccgggtcatt ttcaagggtt accgggtcgg
      781 gtttttacct caaaagtacc agaatggact tctaatgtgg ctcattatag taaaggtgag
      841 tacttgcgga tagatcatgc gcgtagtcat gaagtgcgtg gatctattgc tgtaccggtt
      901 tttgaagatg ataattatga gaaatcttgc tgtgcggtgc ttgaacttgt tacaacgaaa
      961 gagaaatctg atttcaatgc ggagatgaat catgtttgcc gtgcacttga gactgtgaac
     1021 cttaaaagtg ttgcaactcc tcaacttaat aaacagtgcc tttcgaaaaa tcaaatggct
     1081 gctttagctg aaatatcgaa tgtgcttcga gctgtatgcc atgcacatag attaccagtt
     1141 gctttaacat ggataccatg tagttataac aaaggtgttg gtgatgaagt tataaaagta
     1201 cgggttggag ggtgtaatac caacccaaca gagaaagttg tattatatgt ccaaacggat
     1261 gcttgttatg tcaatgaaca aaagatgcaa ggttttgtac aagcttgtag cgagcatcat
     1321 ctcgaagaag gacagggtat tgcaggaaaa gcacttcagt cgaatcatcc gtttttctta
     1381 cccgatgtaa aagattacca tataaacgag tacccacttg tgcaacatgc tcgtaaatat
     1441 ggcttgaatg ctgctgtagc aatcaggctg aggagcacgt ttactggtga tgatgattat
     1501 atattggagt tttttcttcc tgttaacatg aaaggttgta cagagcagca acttttgttg
     1561 aataatttat cgagtacgat gcagaggatt tgtagaagtt tgaggactgt ttctgatact
     1621 gaattgtctg gtgtggtggg acccaatgtt gaattccata tgggattaga tgaaagcagg
     1681 ctgcttttga atcatgctga tcaaatttct gtaaaagaaa ctgaatcagt ggatgttagg
     1741 atgggaccaa gtccacctga tcagctggtt ggtggatcaa agagacaatc cgagaaaaag
     1801 cgaagttctg cagagaagaa tgttagctta agtgtactac aacaatactt ttctgggagc
     1861 cttaaagatg ctgcaaaagc cattggagtt tgtcctacta cactaaaaag gatatgcaga
     1921 caacatggta tttcgagatg gccatcacgc aagattaaca aggtaaatcg ttctctaaag
     1981 aagatacaga cggttctcga ctctgtacaa ggcgtggaag gaggtttaaa attcgacccc
     2041 gcgacaggtg gacttgtagc tgcaaacacc gtcacccaag atcttgatgc acaaaaaagt
     2101 tcaatgcttt caaataatag caccgaagtt gcatcacaac atcctcaacc atcatcatgc
     2161 tttaataccg aaagtctaaa attagaggat gaatgtaatg ttggagtgga cgaattaaga
     2221 tcatctaata gcctcccgat tccaattaca acttctatgg gtggatattg tattgataaa
     2281 tggagtccag ttgatggtca actgaaagta gaaaagtcaa accgccttta ttcgtcgcat
     2341 agctcgagtt ccttgggtgc tggtgatgac atggacacat caatgaatga caatgatgtc
     2401 atcgatggtt atgataatga tcataaccag tcaacttctt ccagcatgac agattcatca
     2461 aatgggtcaa cgatgaatgg aagttcaacg agctctccaa gcttcagtgg tctgaaaaac
     2521 tcgaaaacag aaaggtttaa tggggatgaa ggatcgaaac taactgtaaa agctacatac
     2581 aaagaagata cagttaggtt taagtttgag ccttcatctg gttggtttca tctttatgaa
     2641 gaagttgcaa aaaggtttaa aatacaaaca gggacgttcc agctcaagta caaggacgat
     2701 gaagaggaat gggtattgtt ggtttgcgaa tctgattgga gggagtgtgt tgaaattttg
     2761 gaatcttctg ggacccgcat tgtgaagttt cttgttcgtg atgctacttt tggtatggga
     2821 agctcaggca gtagcaattg tttcctaatc gggagttctt gacgtcctac tgttggtgtg
     2881 agcgagctgt gacccgtttg agagcttaaa ggagttgatt ttgttgacat caaggagtgg
     2941 ggaagcttga gctttagatg gtttgaacaa tctgtataat ggtaatggtg tttgttacag
     3001 gtataggtat gggaaaaaaa aagatgggag tagttagtta ttttaatttt acagttggaa
     3061 tttggaaaga tgttttttat gtggactatt ttgttaaagc aaatggtaaa aattgtagaa
     3121 atattttggt tacaagagca ttgtactctt ctaacataca atgtacaaat agtatcacat
     3181 aaagtataaa caatataaag catgtgggtt ccatttttct aagagatctt cgtcaaatcc
     3241 atggtgaacc taagagagaa ttcggtgctt atcatggcga gcagacggcg attgccatgt
     3301 cacctcggcg agtttgcatg gctagataca ggcagtggtc taagtttcaa tatatttgc
//
LOCUS       XM_071829887            1497 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839741), mRNA.
ACCESSION   XM_071829887
VERSION     XM_071829887.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1497
                     /gene="LOC139839741"
                     /note="uncharacterized LOC139839741; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839741"
     CDS             410..1213
                     /gene="LOC139839741"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685988.1"
                     /db_xref="GeneID:139839741"
                     /translation="MLESRKEATVADRIMNVNSTSIGNWDWSRPPSGRAKDYLTELNN
                     LITSVIISDRPDSWKCSLDTSGIYTSAALSNLINKIKYGTNSRNLSLPQNKFVPQKIF
                     IFSWRAVQQKIPVRSELDKKGIDLHTILCPLCEHQIETIDHALLNCQKVSSIWIQFLD
                     WWNQNNISISNINDAIISDQGISHNSIGSSIWQAAKWIACYIIWKHRNLKIFSGKIWN
                     PAVIISEIQSQSFSWISNRSRKKTPIDWHQWLLNPSFYVSPPSNRIGVG"
     misc_feature    <689..853
                     /gene="LOC139839741"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 ggccaaaagc ttagaatctc tcaactggct aaacgttgta agtcctcgtc taacggtggt
       61 ggtagcacat cctacttctc gaagggatct catatggaca tggtacataa caaaaagact
      121 aaaaagacag gttctacctc tagcaaaagc ttggatacgt tcgaattcgg gaaaagcatc
      181 gggattcgtc gcaacaaccc atgaatccac ctccgtcaca tcgattctga acatttcagg
      241 tcgcaccatt tggaaagaga ttattaaagc tggaaaagtt gctgacaata taggcacaac
      301 cttcacatcc tcgatttcaa agcgcatagg aaatggcaca tcaataagct tctggcatga
      361 tatatggatc ggatctgagt gcttaaaaga tacatttcat agactattca tgttggaatc
      421 ccgcaaagaa gcaactgttg ctgatagaat aatgaacgtt aactctacct cgatcggtaa
      481 ttgggattgg tcccgccctc ctagtggtcg tgcaaaggat tatctcacgg agctcaacaa
      541 cctaataaca tctgttatta tttcagatcg ccccgactca tggaaatgtt cccttgacac
      601 atccggcatc tacacttcag cagcactgtc aaatctgatc aataagatta aatacggcac
      661 aaactctaga aacctttcac tacctcaaaa caaattcgtt ccacaaaaga tattcatttt
      721 ctcatggagg gccgttcaac aaaaaatccc ggttagaagc gaactcgata aaaaaggaat
      781 tgaccttcac accatcttat gtcccttatg tgagcaccaa attgaaacca ttgatcacgc
      841 gttgttaaat tgtcaaaaag tatcttcaat atggatacaa tttctcgatt ggtggaatca
      901 aaacaacata agtatctcta acatcaatga tgccatcatc tcggatcaag gcatatcaca
      961 taattccatt ggttcttcaa tatggcaagc tgctaaatgg attgcgtgct acattatttg
     1021 gaaacatagg aacttaaaga ttttttccgg aaaaatatgg aaccccgctg tgataatctc
     1081 cgagatccaa tctcaaagct ttagctggat ctcaaatcgt tcacggaaga aaacacctat
     1141 cgattggcat caatggctac tcaacccgtc attttacgtg tcacctcctt caaaccgcat
     1201 aggcgtcggt taacataact taattcaaat cgggatggtt tcgttattct atatagccta
     1261 tgtgggttag attaaatggg ttggttgtgt gtcaactttg tagtcgcttg atcggcacgg
     1321 ttgtcccctc cttccccgct tgttgttctt ttacgcaagt tcgtccctcg tagtgttatc
     1381 tagtctacgt ctcccccgat cataagttca gataattatt ccatattttc tcagctgatc
     1441 cgtttcgttt atagcattgt ataaaagcat atagggactt gtattgtaat attccat
//
LOCUS       XM_071829888            2500 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rab GTPase-activating
            protein 22-like (LOC139839742), transcript variant X1, mRNA.
ACCESSION   XM_071829888
VERSION     XM_071829888.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2500
                     /gene="LOC139839742"
                     /note="rab GTPase-activating protein 22-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839742"
     CDS             122..2134
                     /gene="LOC139839742"
                     /codon_start=1
                     /product="rab GTPase-activating protein 22-like isoform
                     X1"
                     /protein_id="XP_071685989.1"
                     /db_xref="GeneID:139839742"
                     /translation="MSFDGDHKQWMCGKVNLQRVSSMVRDIREPCLHQSPIKVVVTIN
                     KMLKPEKWLTTFDSSGKVFGFQKALKLIVLGGVDPSIRPEVWEFLLGCYSLSTTADYR
                     RRLRTARRKRYRDLIKQCQSMSSSIGTGSLAYVTGSKVMDMRTMAKKDERHKSELKHD
                     QTSNDVSERLDSFSNCSDICNQTSYTHPRESTDFAAFDDLYSVSSSTPCSDNYQKAES
                     EGDGSQYRTSSYDNFPALPVTNLFDKSGTDDNDECKSHDKRLSTRRKLRYEDDHVYDF
                     QINNNVDLVMDDSTSNNPTCIDNSRIEVARSSHLDYEVEKVDQQKKSDSPEIPVVNPV
                     TSHGRTRSHDRVSEWLWTLHQIVVDVVRTDSDLEFYEDTKNLARMSDILAVYAWVDPA
                     TGYCQGMSDLLSPFIVLFEDDADAFWCFEMLLRRMRENFKMEGTTGVMKQLEALWHIL
                     EHVDREMFTHLSQIGAESLHFAFRMLLVLFRRELSFSEVLCMWEMMWAADFDESLAFN
                     LENSCPELLVLQIPHELTTVKRDEIIENENVDSKGGSDVKIGNLERSNFGNYGIKSTS
                     KHHPFCGLTKSLWSKNESFQICTIISSTRNGDDELPIFCVAAILFLNRHKIIKESRSI
                     DDLIKIFNDNMLKIRVKRCIRTAIKLRRKYFYKLIKNRSPAAGYDD"
     misc_feature    <1175..1627
                     /gene="LOC139839742"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; Region: TBC; smart00164"
                     /db_xref="CDD:214540"
ORIGIN      
        1 ttgtttggtg ataattgctg acgtggcgtc ccactgcgtt ttggtgtgtt aaggactcgg
       61 actcgaatct cgattactag acattgaagg gggactagtg agtagtttga aattactggt
      121 gatgtctttt gacggagatc acaagcaatg gatgtgtgga aaggtgaatt tgcaaagagt
      181 cagttcaatg gttcgcgata tccgggagcc ttgtcttcat caatcaccca taaaggttgt
      241 tgttaccata aataaaatgc ttaaaccaga gaagtggcta acaacatttg atagcagtgg
      301 aaaggttttt ggttttcaga aagcactgaa actgattgtg ttaggggggg tggatccatc
      361 tataaggcct gaagtgtggg aatttcttct gggctgttat agtctgagca caactgcaga
      421 ttacaggaga cggttaagga ctgcaaggag gaaacgttat agagatctta ttaagcaatg
      481 tcaatcaatg agttccagca taggtactgg ttccctggcc tatgttacgg ggtcaaaagt
      541 aatggatatg agaacaatgg ctaaaaagga cgagagacat aaatctgaac tgaaacatga
      601 tcaaacatct aatgatgttt ctgaaagatt ggattcgttc tccaattgct ccgatatatg
      661 taaccaaact tcatatacac atccacgaga aagcaccgat tttgcagcgt tcgacgattt
      721 atattccgtt tcttcttcta ctccatgcag tgacaattat caaaaggcag aaagtgaagg
      781 ggatggatca caatacagaa cttcaagtta tgacaatttt cctgctttac cagttacaaa
      841 tttatttgac aagagtggta cagatgataa tgatgaatgt aaatcacatg ataaaagact
      901 tagtacaagg cgtaagctaa gatatgaaga tgatcatgtg tatgactttc agattaataa
      961 caatgtggat ttagtaatgg atgattccac atctaacaat cctacgtgta tagacaactc
     1021 aagaattgaa gtagccagat ctagtcattt ggactatgaa gtagaaaagg ttgaccaaca
     1081 aaaaaagtca gactcacctg aaatccctgt agtgaacccg gtgacgtccc atggaagaac
     1141 acggagtcat gacagagtat ccgagtggct ttggactctg caccaaatag tcgtcgatgt
     1201 tgttagaaca gatagcgatc tggaatttta cgaggataca aaaaatttag cccggatgtc
     1261 agatattctt gctgtttatg cgtgggttga tcctgcaaca ggatattgtc aaggtatgag
     1321 tgatctgtta tctcctttta ttgtgctatt tgaggatgat gccgatgctt tttggtgctt
     1381 tgaaatgctc ttaaggagaa tgcgtgaaaa ttttaagatg gaaggaacga caggtgtgat
     1441 gaagcagctt gaagctcttt ggcatatttt agaacatgta gacagggaaa tgtttactca
     1501 tttatcacaa ataggcgctg aaagccttca ttttgcgttt cgtatgcttc tggtactctt
     1561 tcgcagggag ttatctttta gcgaggtgct ttgcatgtgg gagatgatgt gggctgctga
     1621 ttttgatgaa tccctggctt tcaatctgga aaatagctgt ccagaacttt tggttttaca
     1681 gatccctcat gaattaacta cagttaagag agacgaaatt attgagaatg aaaatgttga
     1741 ttcaaaaggt gggtcagatg tgaaaattgg aaatttagag cggtcaaatt ttgggaacta
     1801 tggaataaaa tcgacatcaa aacatcaccc gttttgtgga ttgacgaaga gcttgtggtc
     1861 aaaaaatgag agttttcaaa tatgcactat aatatcatct acaagaaatg gggatgatga
     1921 attacccatt ttctgtgtag ctgcaattct atttctaaac cgccataaga tcatcaaaga
     1981 aagccgttca attgacgact taataaagat attcaatgat aatatgctga agattagggt
     2041 taagaggtgt atacgtactg ccattaaact ccgaaggaaa tacttctaca agttgatcaa
     2101 gaatcggagt ccagcagctg gctatgatga ctagcttggt tgaaccccat ccatgctgca
     2161 tctccaaatt aggatgttag ctgcatagca acagatttta cctttcttat gcattaatag
     2221 agtgtgctta tgccatatga acagtcctca aattcggttg aaaaacgctc aaacttcttt
     2281 caggattgtg aattgaagct atgaaatgcc ttctagacag aacttcagaa gatgatcact
     2341 ggtacatcgt acgtaactct ccatttgttg tgccatattt ttttatttga agtccatggg
     2401 ggtagaaact tatatacaac ttgtaaatgt aaacttaaaa ttaaagaact cattacaatt
     2461 tatactttcc aacagagaaa tagaatttgt tttttttttt
//
LOCUS       XM_071829889            2488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rab GTPase-activating
            protein 22-like (LOC139839742), transcript variant X2, mRNA.
ACCESSION   XM_071829889
VERSION     XM_071829889.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2488
                     /gene="LOC139839742"
                     /note="rab GTPase-activating protein 22-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839742"
     CDS             122..2122
                     /gene="LOC139839742"
                     /codon_start=1
                     /product="rab GTPase-activating protein 22-like isoform
                     X2"
                     /protein_id="XP_071685990.1"
                     /db_xref="GeneID:139839742"
                     /translation="MSFDGDHKQWMCGKVNLQRVSSMVRDIREPCLHQSPIKINKMLK
                     PEKWLTTFDSSGKVFGFQKALKLIVLGGVDPSIRPEVWEFLLGCYSLSTTADYRRRLR
                     TARRKRYRDLIKQCQSMSSSIGTGSLAYVTGSKVMDMRTMAKKDERHKSELKHDQTSN
                     DVSERLDSFSNCSDICNQTSYTHPRESTDFAAFDDLYSVSSSTPCSDNYQKAESEGDG
                     SQYRTSSYDNFPALPVTNLFDKSGTDDNDECKSHDKRLSTRRKLRYEDDHVYDFQINN
                     NVDLVMDDSTSNNPTCIDNSRIEVARSSHLDYEVEKVDQQKKSDSPEIPVVNPVTSHG
                     RTRSHDRVSEWLWTLHQIVVDVVRTDSDLEFYEDTKNLARMSDILAVYAWVDPATGYC
                     QGMSDLLSPFIVLFEDDADAFWCFEMLLRRMRENFKMEGTTGVMKQLEALWHILEHVD
                     REMFTHLSQIGAESLHFAFRMLLVLFRRELSFSEVLCMWEMMWAADFDESLAFNLENS
                     CPELLVLQIPHELTTVKRDEIIENENVDSKGGSDVKIGNLERSNFGNYGIKSTSKHHP
                     FCGLTKSLWSKNESFQICTIISSTRNGDDELPIFCVAAILFLNRHKIIKESRSIDDLI
                     KIFNDNMLKIRVKRCIRTAIKLRRKYFYKLIKNRSPAAGYDD"
     misc_feature    <1163..1615
                     /gene="LOC139839742"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; Region: TBC; smart00164"
                     /db_xref="CDD:214540"
ORIGIN      
        1 ttgtttggtg ataattgctg acgtggcgtc ccactgcgtt ttggtgtgtt aaggactcgg
       61 actcgaatct cgattactag acattgaagg gggactagtg agtagtttga aattactggt
      121 gatgtctttt gacggagatc acaagcaatg gatgtgtgga aaggtgaatt tgcaaagagt
      181 cagttcaatg gttcgcgata tccgggagcc ttgtcttcat caatcaccca taaagataaa
      241 taaaatgctt aaaccagaga agtggctaac aacatttgat agcagtggaa aggtttttgg
      301 ttttcagaaa gcactgaaac tgattgtgtt agggggggtg gatccatcta taaggcctga
      361 agtgtgggaa tttcttctgg gctgttatag tctgagcaca actgcagatt acaggagacg
      421 gttaaggact gcaaggagga aacgttatag agatcttatt aagcaatgtc aatcaatgag
      481 ttccagcata ggtactggtt ccctggccta tgttacgggg tcaaaagtaa tggatatgag
      541 aacaatggct aaaaaggacg agagacataa atctgaactg aaacatgatc aaacatctaa
      601 tgatgtttct gaaagattgg attcgttctc caattgctcc gatatatgta accaaacttc
      661 atatacacat ccacgagaaa gcaccgattt tgcagcgttc gacgatttat attccgtttc
      721 ttcttctact ccatgcagtg acaattatca aaaggcagaa agtgaagggg atggatcaca
      781 atacagaact tcaagttatg acaattttcc tgctttacca gttacaaatt tatttgacaa
      841 gagtggtaca gatgataatg atgaatgtaa atcacatgat aaaagactta gtacaaggcg
      901 taagctaaga tatgaagatg atcatgtgta tgactttcag attaataaca atgtggattt
      961 agtaatggat gattccacat ctaacaatcc tacgtgtata gacaactcaa gaattgaagt
     1021 agccagatct agtcatttgg actatgaagt agaaaaggtt gaccaacaaa aaaagtcaga
     1081 ctcacctgaa atccctgtag tgaacccggt gacgtcccat ggaagaacac ggagtcatga
     1141 cagagtatcc gagtggcttt ggactctgca ccaaatagtc gtcgatgttg ttagaacaga
     1201 tagcgatctg gaattttacg aggatacaaa aaatttagcc cggatgtcag atattcttgc
     1261 tgtttatgcg tgggttgatc ctgcaacagg atattgtcaa ggtatgagtg atctgttatc
     1321 tccttttatt gtgctatttg aggatgatgc cgatgctttt tggtgctttg aaatgctctt
     1381 aaggagaatg cgtgaaaatt ttaagatgga aggaacgaca ggtgtgatga agcagcttga
     1441 agctctttgg catattttag aacatgtaga cagggaaatg tttactcatt tatcacaaat
     1501 aggcgctgaa agccttcatt ttgcgtttcg tatgcttctg gtactctttc gcagggagtt
     1561 atcttttagc gaggtgcttt gcatgtggga gatgatgtgg gctgctgatt ttgatgaatc
     1621 cctggctttc aatctggaaa atagctgtcc agaacttttg gttttacaga tccctcatga
     1681 attaactaca gttaagagag acgaaattat tgagaatgaa aatgttgatt caaaaggtgg
     1741 gtcagatgtg aaaattggaa atttagagcg gtcaaatttt gggaactatg gaataaaatc
     1801 gacatcaaaa catcacccgt tttgtggatt gacgaagagc ttgtggtcaa aaaatgagag
     1861 ttttcaaata tgcactataa tatcatctac aagaaatggg gatgatgaat tacccatttt
     1921 ctgtgtagct gcaattctat ttctaaaccg ccataagatc atcaaagaaa gccgttcaat
     1981 tgacgactta ataaagatat tcaatgataa tatgctgaag attagggtta agaggtgtat
     2041 acgtactgcc attaaactcc gaaggaaata cttctacaag ttgatcaaga atcggagtcc
     2101 agcagctggc tatgatgact agcttggttg aaccccatcc atgctgcatc tccaaattag
     2161 gatgttagct gcatagcaac agattttacc tttcttatgc attaatagag tgtgcttatg
     2221 ccatatgaac agtcctcaaa ttcggttgaa aaacgctcaa acttctttca ggattgtgaa
     2281 ttgaagctat gaaatgcctt ctagacagaa cttcagaaga tgatcactgg tacatcgtac
     2341 gtaactctcc atttgttgtg ccatattttt ttatttgaag tccatggggg tagaaactta
     2401 tatacaactt gtaaatgtaa acttaaaatt aaagaactca ttacaattta tactttccaa
     2461 cagagaaata gaatttgttt tttttttt
//
LOCUS       XM_071829890            1550 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides oxygen-dependent
            coproporphyrinogen-III oxidase, chloroplastic-like (LOC139839743),
            mRNA.
ACCESSION   XM_071829890
VERSION     XM_071829890.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1550
                     /gene="LOC139839743"
                     /note="oxygen-dependent coproporphyrinogen-III oxidase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139839743"
     CDS             96..1298
                     /gene="LOC139839743"
                     /codon_start=1
                     /product="oxygen-dependent coproporphyrinogen-III oxidase,
                     chloroplastic-like"
                     /protein_id="XP_071685991.1"
                     /db_xref="GeneID:139839743"
                     /translation="MISSISSTSSFQLHTSSTPLQTLALTNSISTSSTSFTRRIPKFR
                     NPNSHKTLTIKASSHMIEKEQAETHRPDTFLRESDGGVAATSDGGSVRGNFEKMIRDA
                     QDSVCAAIEAADGGGKFKEDVWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGVMPPE
                     AYRAANPKDAENGNFKPGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDARKDAPG
                     APRQWWFGGGTDLTPAYIFEEDVKHFHTVQKNACDKFDPSFYPRFKKWCDDYFYIKHR
                     NERRGLGGIFFDDLNDYDQEMLLSFATECANSVVDAYIPIIERRKDTPFTQQNKEWQQ
                     LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHQPEEGSEEWKLLDA
                     CINPKEWI"
     misc_feature    378..1292
                     /gene="LOC139839743"
                     /note="Coproporphyrinogen III oxidase; Region:
                     Coprogen_oxidas; pfam01218"
                     /db_xref="CDD:460116"
     polyA_site      1550
                     /gene="LOC139839743"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttttttatc ttcatcctca tacacattat cagctgcacc cttaacatcc cagctctcaa
       61 gctcacaaat aacagtggca gcatcattaa ctaccatgat ctcatcgata tcttccacct
      121 catcattcca attacacact tcttccacgc ctttacaaac cctagctcta accaactcca
      181 tttccacttc atcaacatca ttcacccgca gaatccctaa atttagaaac cctaacagcc
      241 acaaaaccct aacaattaaa gcatcatcac acatgatcga aaaggaacaa gccgagactc
      301 accggccgga caccttcctc cgggaatccg acggcggcgt tgcggcgacc agtgatggcg
      361 gttcggttag aggaaatttt gagaagatga tcagagatgc gcaggatagc gtttgtgctg
      421 cgattgaagc ggctgatggt ggtggtaagt ttaaggaaga tgtgtggtca aggcctggcg
      481 gtggtggtgg aatcagtagg gttttgcaag acggcgccgt ttgggagaaa gctggtgtta
      541 atgtttctgt tgtctacggt gttatgccac ctgaagctta tagagctgct aatcctaagg
      601 atgctgaaaa tggaaatttc aaacctggac ctgttccatt ttttgctgct ggtatcagct
      661 ctgttttaca tccaaagaat ccttttgcgc caacattgca tttcaattat cgttattttg
      721 agactgatgc tcgaaaggat gctccgggtg caccgaggca gtggtggttt ggtggtggta
      781 ccgatttgac tcctgcttat atatttgagg aagatgtcaa gcatttccat acggtacaaa
      841 aaaatgcttg cgacaagttt gacccgagtt tttacccacg gttcaagaaa tggtgtgatg
      901 actatttcta catcaagcac cgaaatgaga gacgaggtct tggaggcata tttttcgatg
      961 atctaaatga ctacgatcaa gaaatgcttc tctcatttgc cacagagtgt gccaactctg
     1021 ttgttgatgc atatatacca ataatagaaa ggagaaagga taccccgttc acacagcaaa
     1081 acaaggaatg gcaacaactg cgtagaggca gatatgtgga attcaacttg gtgtatgacc
     1141 gaggaacaac atttggtctc aaaactggag gtcggattga aagcattctt gtttctttgc
     1201 cattaacagc cagatgggaa tatgatcatc aaccagaaga gggtagtgaa gaatggaaac
     1261 ttttggatgc gtgtattaac ccgaaagagt ggatctaaat ctgatgtttt ccacatagcc
     1321 tgtaagatac cgcttccttt ttcataataa tcccctttgc cctttttgtg ttgagtttat
     1381 taaaatgtag agatgagaga atgtagttga gtaagtagat tgtaaacaga gattatgcaa
     1441 tgtagaaatt gttttatgtt gtaatgttca ttctatcctt tttaaagtat ttcacacact
     1501 tgaattattt tgtagatcta tttactactg taataatttg gttgcaataa
//
LOCUS       XR_011757050             485 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839744), ncRNA.
ACCESSION   XR_011757050
VERSION     XR_011757050.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..485
                     /gene="LOC139839744"
                     /note="uncharacterized LOC139839744; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839744"
     ncRNA           1..485
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839744"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839744"
ORIGIN      
        1 gaaaattcac taaaccctaa tgacgttcaa actcggcttc agtccaataa ttcgtcgtta
       61 cctgatcaca tcaaaatcaa tgccgccatc agatgtttac acccttttta aactatggaa
      121 acgtctccaa agagggattg catactacta ttaagttctc caagacttca caagactgat
      181 gagaagaaat catgtgttgc actttcaagg tggattttgt ttgtgtcaga catgataaag
      241 attggaagaa gaagatgaag gcgataggag tttttttagg agagagaggt ggctgctgat
      301 accatataag tgagtaaaat ctcgtatctg ttattcattg attaacattg tatatataca
      361 agtgtcctac accaaactat cagtaaagat aggaactgac cacatgtgct tttgactaac
      421 ccctatatct gctctgttac aacaatccaa agtatacaaa atatacatat acactacata
      481 atata
//
LOCUS       XR_011757051            1670 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839745), transcript variant X1, ncRNA.
ACCESSION   XR_011757051
VERSION     XR_011757051.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1670
                     /gene="LOC139839745"
                     /note="uncharacterized LOC139839745; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839745"
     ncRNA           1..1670
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839745"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839745"
ORIGIN      
        1 tctctctacc ttctctcttc acatttgaaa agtcagatct tctccaccgc cgatggtggt
       61 gcaacacgcc gttgataaaa atcgccgata atccagatta aatcgttacc attttacgaa
      121 cataacggta acacttttgt atattttacg aacatttatg tcattcttaa agattcagta
      181 atcgattcga tagtagattt cataatcgct aacaacacgg tgctgctaac atcaggttta
      241 agcatctaag aattcgaatc ttcgatcatg gttggtgttt ctacacgagg gaaaagttga
      301 atgagaagga atgactcatg aagtcacttc gtccgcaaat cctattgttc agcaggtcac
      361 taacaatcag tatatatagt catttccatt cattacaaga agagtatgat gcagatggag
      421 gtgagatatt gcttgatgat gatgaaaatg atggttggtt ggctactcct agacagctga
      481 tagttttgga ttgttgatgt gtaaacttta catctccact tatgcatatg aaatatggat
      541 tttgattagt gtttgtgaat tgttaattca tctcatgaaa atgttggctg caagtaagta
      601 catatttata caacataatt gtcagtattt actcttttgc ccttttgaat atatccgagg
      661 agttaattgt ataccatgtt cattgtagat attagatagg aattggggcg cacgctgaca
      721 cttactatca ttacttttac atgctacacc tcttgataga ataagcgaat caggctcgct
      781 cactttattg aattaatgga gattctgaat ccttatccga ggcgaaagaa atcatcaatt
      841 ggttggactc atgaagctca atggttgcat tcattgtgta ggtggttttg cagctgattt
      901 tgcttaatat gttagtttgt ttacgggctg taagttatag attgctttct gtatactaat
      961 tacagctttt gttcagtgca aatgactaat ttgcagccac ctatatcctg cgtaattatg
     1021 ttttgagcat ggcctggaat aacacccctg gtttggctta aaaacattat taacgctgat
     1081 ttcacgttac tcatttgcga ctcgagcatt gtctagaaga ctaggctttg cttgtctaga
     1141 aaacaggata taagcagcct atatttaagg cgaataataa caatttactt ggcacataca
     1201 attgtgcaac atgctgttta tggagtataa agtcagtcgt tattgtgtca atcacgagca
     1261 atcatagaag atctgcccag gaagccacat tggtcttggt tacatatgta tgcaggaact
     1321 ttgtgcaaaa acagacattc taatgctgtt gtgacttttg agatgttgat gtcgctccga
     1381 gatgtgaagc atgagtgttt ggatatgagg gtttgacatt tctcaagtaa ttatacgtta
     1441 tatgcaaact caaaaattac caacgacatt aacagattaa acaaattgta agcaagatat
     1501 ggatttgatt tgttttcata attttatatt tctttatttc tattttctga aaattgtgta
     1561 ttggggtagg tcttcgatag ttaattgact ataatgttaa tctggtgcgc gtgtcatgta
     1621 gtgacccgaa cttttccatg tttatatata ttaaatgaaa ttgatattta
//
LOCUS       XR_011757052            1581 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839745), transcript variant X2, ncRNA.
ACCESSION   XR_011757052
VERSION     XR_011757052.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1581
                     /gene="LOC139839745"
                     /note="uncharacterized LOC139839745; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839745"
     ncRNA           1..1581
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839745"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839745"
ORIGIN      
        1 ttagtagttt attcattcat tattttggtg gttctgacct tttagataaa ggatacgaag
       61 tcataaattg atgcataatg ttgttatttc tcaacgaaca caacatgctc gataaaatgc
      121 cacatagaag ttcaataacg attgtggttt aagcatctaa gaattcgaat cttcgatcat
      181 ggttggtgtt tctacacgag ggaaaagttg aatgagaagg aatgactcat gaagtcactt
      241 cgtccgcaaa tcctattgtt cagcaggtca ctaacaatca gtatatatag tcatttccat
      301 tcattacaag aagagtatga tgcagatgga ggtgagatat tgcttgatga tgatgaaaat
      361 gatggttggt tggctactcc tagacagctg atagttttgg attgttgatg tgtaaacttt
      421 acatctccac ttatgcatat gaaatatgga ttttgattag tgtttgtgaa ttgttaattc
      481 atctcatgaa aatgttggct gcaagtaagt acatatttat acaacataat tgtcagtatt
      541 tactcttttg cccttttgaa tatatccgag gagttaattg tataccatgt tcattgtaga
      601 tattagatag gaattggggc gcacgctgac acttactatc attactttta catgctacac
      661 ctcttgatag aataagcgaa tcaggctcgc tcactttatt gaattaatgg agattctgaa
      721 tccttatccg aggcgaaaga aatcatcaat tggttggact catgaagctc aatggttgca
      781 ttcattgtgt aggtggtttt gcagctgatt ttgcttaata tgttagtttg tttacgggct
      841 gtaagttata gattgctttc tgtatactaa ttacagcttt tgttcagtgc aaatgactaa
      901 tttgcagcca cctatatcct gcgtaattat gttttgagca tggcctggaa taacacccct
      961 ggtttggctt aaaaacatta ttaacgctga tttcacgtta ctcatttgcg actcgagcat
     1021 tgtctagaag actaggcttt gcttgtctag aaaacaggat ataagcagcc tatatttaag
     1081 gcgaataata acaatttact tggcacatac aattgtgcaa catgctgttt atggagtata
     1141 aagtcagtcg ttattgtgtc aatcacgagc aatcatagaa gatctgccca ggaagccaca
     1201 ttggtcttgg ttacatatgt atgcaggaac tttgtgcaaa aacagacatt ctaatgctgt
     1261 tgtgactttt gagatgttga tgtcgctccg agatgtgaag catgagtgtt tggatatgag
     1321 ggtttgacat ttctcaagta attatacgtt atatgcaaac tcaaaaatta ccaacgacat
     1381 taacagatta aacaaattgt aagcaagata tggatttgat ttgttttcat aattttatat
     1441 ttctttattt ctattttctg aaaattgtgt attggggtag gtcttcgata gttaattgac
     1501 tataatgtta atctggtgcg cgtgtcatgt agtgacccga acttttccat gtttatatat
     1561 attaaatgaa attgatattt a
//
LOCUS       XR_011757053            1611 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839745), transcript variant X3, ncRNA.
ACCESSION   XR_011757053
VERSION     XR_011757053.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1611
                     /gene="LOC139839745"
                     /note="uncharacterized LOC139839745; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839745"
     ncRNA           1..1611
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839745"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839745"
ORIGIN      
        1 tctctctacc ttctctcttc acatttgaaa agtcagatct tctccaccgc cgatggtggt
       61 gcaacacgcc gttgataaaa atcgccgata atccagatta aatcgttacc attttacgaa
      121 cataacggta acacttttgt atattttacg aacatttatg tcattcttaa agattcagta
      181 atcgattcga tagtagattt cataatcgct aacaacacgg tgctgctaac atcaggttta
      241 agcatctaag aattcgaatc ttcgatcatg gttggtgttt ctacacgagg gaaaagttga
      301 atgagaagga atgactcatg aagtcacttc gtccgcaaat cctattgttc agcagatgga
      361 ggtgagatat tgcttgatga tgatgaaaat gatggttggt tggctactcc tagacagctg
      421 atagttttgg attgttgatg tgtaaacttt acatctccac ttatgcatat gaaatatgga
      481 ttttgattag tgtttgtgaa ttgttaattc atctcatgaa aatgttggct gcaagtaagt
      541 acatatttat acaacataat tgtcagtatt tactcttttg cccttttgaa tatatccgag
      601 gagttaattg tataccatgt tcattgtaga tattagatag gaattggggc gcacgctgac
      661 acttactatc attactttta catgctacac ctcttgatag aataagcgaa tcaggctcgc
      721 tcactttatt gaattaatgg agattctgaa tccttatccg aggcgaaaga aatcatcaat
      781 tggttggact catgaagctc aatggttgca ttcattgtgt aggtggtttt gcagctgatt
      841 ttgcttaata tgttagtttg tttacgggct gtaagttata gattgctttc tgtatactaa
      901 ttacagcttt tgttcagtgc aaatgactaa tttgcagcca cctatatcct gcgtaattat
      961 gttttgagca tggcctggaa taacacccct ggtttggctt aaaaacatta ttaacgctga
     1021 tttcacgtta ctcatttgcg actcgagcat tgtctagaag actaggcttt gcttgtctag
     1081 aaaacaggat ataagcagcc tatatttaag gcgaataata acaatttact tggcacatac
     1141 aattgtgcaa catgctgttt atggagtata aagtcagtcg ttattgtgtc aatcacgagc
     1201 aatcatagaa gatctgccca ggaagccaca ttggtcttgg ttacatatgt atgcaggaac
     1261 tttgtgcaaa aacagacatt ctaatgctgt tgtgactttt gagatgttga tgtcgctccg
     1321 agatgtgaag catgagtgtt tggatatgag ggtttgacat ttctcaagta attatacgtt
     1381 atatgcaaac tcaaaaatta ccaacgacat taacagatta aacaaattgt aagcaagata
     1441 tggatttgat ttgttttcat aattttatat ttctttattt ctattttctg aaaattgtgt
     1501 attggggtag gtcttcgata gttaattgac tataatgtta atctggtgcg cgtgtcatgt
     1561 agtgacccga acttttccat gtttatatat attaaatgaa attgatattt a
//
LOCUS       XM_071829891            1474 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein-interacting protein 12-like (LOC139839746), transcript
            variant X1, mRNA.
ACCESSION   XM_071829891
VERSION     XM_071829891.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1474
                     /gene="LOC139839746"
                     /note="polyadenylate-binding protein-interacting protein
                     12-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 30 Proteins"
                     /db_xref="GeneID:139839746"
     CDS             200..1243
                     /gene="LOC139839746"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 12-like isoform X1"
                     /protein_id="XP_071685992.1"
                     /db_xref="GeneID:139839746"
                     /translation="MAIVENGASNNQVELNEVDQSDSSISVSRADGNGDLINGNDHEE
                     EGFKKEMKELENMFPKLNPMAEEFVPPSLSKVNNNNINNNGYGYGYNNNRVLLQSPSA
                     AVAAQFGYAAVNDFLLQTNHPAFANVNGFSTGRKKGNFGNGKRRANSRTTMAQREDAI
                     KRTVHVSDIDQQVTEEQLAALFINCGQVVDCRVCGDPNSVLRFAFIEFTDEEGARNAL
                     SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVK
                     LFFESLCGEVYRLRLLGDYHHSSRIAFVEFVMAESAIAALNCSGAVLGSLPIRVSPSK
                     TPVRPRSPRPTMH"
     misc_feature    677..916
                     /gene="LOC139839746"
                     /note="RNA recognition motif 1 (RRM1) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; Region:
                     RRM1_CID8_like; cd12459"
                     /db_xref="CDD:409892"
     misc_feature    962..1207
                     /gene="LOC139839746"
                     /note="RNA recognition motif 2 (RRM2) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; Region:
                     RRM2_CID8_like; cd12460"
                     /db_xref="CDD:409893"
     polyA_site      1474
                     /gene="LOC139839746"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accatgtgcc accgtatcag taaacacccc ttattattaa cttacgacta actcctcaac
       61 aaacaacaaa ctgtgataca ttcttgacga acaaaaagtt taattcaatc agccaacact
      121 caattctcga ctcatcatcc atcagaacga aattagctca ataaggacta gtgtcactcg
      181 gtaatcgatc catatcgtca tggctattgt tgagaacggt gcatccaata atcaggtgga
      241 attgaacgag gttgatcagt ccgattcatc gatttcggtt tctagggctg atggaaatgg
      301 tgatttaatt aatggaaatg atcatgagga agaaggattt aagaaagaaa tgaaggaatt
      361 ggagaatatg ttccccaaat tgaaccctat ggctgaagaa tttgttcctc cttcattatc
      421 aaaagttaat aataataata ttaataataa tggttatggt tatggttata ataataatag
      481 ggttttattg caatcaccat ctgctgctgt tgctgctcaa tttggttatg ctgctgttaa
      541 tgatttctta cttcaaacta accaccctgc ttttgctaat gttaatggct tttctactgg
      601 acggaagaag ggtaattttg gcaatggaaa gcggagggcc aatagccgaa ccaccatggc
      661 acaacgagaa gatgccatta agagaactgt tcatgtgtct gacattgatc agcaggtaac
      721 tgaagaacag cttgctgcac tttttattaa ctgtggacag gttgttgatt gccgtgtatg
      781 tggcgaccct aattctgttc ttcgttttgc ttttatcgag tttactgatg aagaaggtgc
      841 gaggaacgca ttgagtctcg ctggaaccat gctcggattc tatcctgtta gggtgctgcc
      901 ttcgaaaacc gcaattgcgc ctgtgaatcc aacttttctg ccccgatctg aggatgaaag
      961 ggaaatgtgt gcacgaacta tttattgtac taacatcgac aagaaggtta ctcaggcgga
     1021 tgtcaaactt ttctttgaat cactttgtgg agaggtttac cgcttgaggt tgcttgggga
     1081 ctatcatcat tcgtctcgca ttgcatttgt ggagtttgtt atggctgaga gcgctattgc
     1141 agctctgaac tgtagcggtg cggtgttagg atcattgcca ataagggtaa gcccttcaaa
     1201 gacccctgtt cgtccacgtt caccccgccc aaccatgcac tgacacgttg gcttcgaaaa
     1261 gctatattta atacgtagat aacggaaact tttgacaatt atgtttttcg tttgtgtatg
     1321 atgcttctca tagcacaaat atgtctatag atttatttaa atgtagagag cctggattga
     1381 aattcgcgga cggtgagcct taattgtgtt attgagaagc gtacggtttt ggatcttatt
     1441 gtcatgtttg tagcacgtta ccattttctt gtta
//
LOCUS       XM_071829892            1471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein-interacting protein 12-like (LOC139839746), transcript
            variant X2, mRNA.
ACCESSION   XM_071829892
VERSION     XM_071829892.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1471
                     /gene="LOC139839746"
                     /note="polyadenylate-binding protein-interacting protein
                     12-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 28 Proteins"
                     /db_xref="GeneID:139839746"
     CDS             200..1240
                     /gene="LOC139839746"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 12-like isoform X2"
                     /protein_id="XP_071685993.1"
                     /db_xref="GeneID:139839746"
                     /translation="MAIVENGASNNQVELNEVDQSDSSISVSRADGNGDLINGNDHEE
                     EGFKKEMKELENMFPKLNPMAEEFVPPSLSKVNNNNINNNGYGYGYNNNRVLLQSPSA
                     AVAAQFGYAAVNDFLLQTNHPAFANVNGFSTGRKGNFGNGKRRANSRTTMAQREDAIK
                     RTVHVSDIDQQVTEEQLAALFINCGQVVDCRVCGDPNSVLRFAFIEFTDEEGARNALS
                     LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKL
                     FFESLCGEVYRLRLLGDYHHSSRIAFVEFVMAESAIAALNCSGAVLGSLPIRVSPSKT
                     PVRPRSPRPTMH"
     misc_feature    674..913
                     /gene="LOC139839746"
                     /note="RNA recognition motif 1 (RRM1) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; Region:
                     RRM1_CID8_like; cd12459"
                     /db_xref="CDD:409892"
     misc_feature    959..1204
                     /gene="LOC139839746"
                     /note="RNA recognition motif 2 (RRM2) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; Region:
                     RRM2_CID8_like; cd12460"
                     /db_xref="CDD:409893"
     polyA_site      1471
                     /gene="LOC139839746"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accatgtgcc accgtatcag taaacacccc ttattattaa cttacgacta actcctcaac
       61 aaacaacaaa ctgtgataca ttcttgacga acaaaaagtt taattcaatc agccaacact
      121 caattctcga ctcatcatcc atcagaacga aattagctca ataaggacta gtgtcactcg
      181 gtaatcgatc catatcgtca tggctattgt tgagaacggt gcatccaata atcaggtgga
      241 attgaacgag gttgatcagt ccgattcatc gatttcggtt tctagggctg atggaaatgg
      301 tgatttaatt aatggaaatg atcatgagga agaaggattt aagaaagaaa tgaaggaatt
      361 ggagaatatg ttccccaaat tgaaccctat ggctgaagaa tttgttcctc cttcattatc
      421 aaaagttaat aataataata ttaataataa tggttatggt tatggttata ataataatag
      481 ggttttattg caatcaccat ctgctgctgt tgctgctcaa tttggttatg ctgctgttaa
      541 tgatttctta cttcaaacta accaccctgc ttttgctaat gttaatggct tttctactgg
      601 acggaagggt aattttggca atggaaagcg gagggccaat agccgaacca ccatggcaca
      661 acgagaagat gccattaaga gaactgttca tgtgtctgac attgatcagc aggtaactga
      721 agaacagctt gctgcacttt ttattaactg tggacaggtt gttgattgcc gtgtatgtgg
      781 cgaccctaat tctgttcttc gttttgcttt tatcgagttt actgatgaag aaggtgcgag
      841 gaacgcattg agtctcgctg gaaccatgct cggattctat cctgttaggg tgctgccttc
      901 gaaaaccgca attgcgcctg tgaatccaac ttttctgccc cgatctgagg atgaaaggga
      961 aatgtgtgca cgaactattt attgtactaa catcgacaag aaggttactc aggcggatgt
     1021 caaacttttc tttgaatcac tttgtggaga ggtttaccgc ttgaggttgc ttggggacta
     1081 tcatcattcg tctcgcattg catttgtgga gtttgttatg gctgagagcg ctattgcagc
     1141 tctgaactgt agcggtgcgg tgttaggatc attgccaata agggtaagcc cttcaaagac
     1201 ccctgttcgt ccacgttcac cccgcccaac catgcactga cacgttggct tcgaaaagct
     1261 atatttaata cgtagataac ggaaactttt gacaattatg tttttcgttt gtgtatgatg
     1321 cttctcatag cacaaatatg tctatagatt tatttaaatg tagagagcct ggattgaaat
     1381 tcgcggacgg tgagccttaa ttgtgttatt gagaagcgta cggttttgga tcttattgtc
     1441 atgtttgtag cacgttacca ttttcttgtt a
//
LOCUS       XM_071829893            1988 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic peptide chain
            release factor subunit 1-2-like (LOC139839747), transcript variant
            X1, mRNA.
ACCESSION   XM_071829893
VERSION     XM_071829893.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1988
                     /gene="LOC139839747"
                     /note="eukaryotic peptide chain release factor subunit
                     1-2-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 34 Proteins"
                     /db_xref="GeneID:139839747"
     CDS             178..1488
                     /gene="LOC139839747"
                     /codon_start=1
                     /product="eukaryotic peptide chain release factor subunit
                     1-2-like"
                     /protein_id="XP_071685994.1"
                     /db_xref="GeneID:139839747"
                     /translation="MADAHDTDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQV
                     SRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTE
                     DGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTL
                     SGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKCAELATQFYINPSTS
                     QPNVSGMILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEIL
                     ANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVDILIVWENLDINRFTL
                     KNVTTGEVIIKHFNKEQEGIQKNFRDSNTNAELEVQEKMSLLEWFANEYRKFGCTLQF
                     VTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDEVSDDELYDDSE"
     misc_feature    211..1431
                     /gene="LOC139839747"
                     /note="peptide chain release factor 1, archaeal and
                     eukaryotic forms; Region: aRF1/eRF1; cl42864"
                     /db_xref="CDD:456209"
     polyA_site      1988
                     /gene="LOC139839747"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgatgatcgg aaattctagt tacgcgtata agaatatatg caacacaact gagatccaaa
       61 atttcatttt catttcaccc aacaaaaaaa taaaaaataa aaataaaaaa attcatcctt
      121 gcaaattctc attcaggtag ttatttaact gctgtgacag tttcagtcac ttaaaagatg
      181 gctgacgctc acgataccga caagaacatc gagatatgga aaatcaaaaa acttattaaa
      241 gcactcgaag cagcacgtgg taacggtacc agcatgattt ctctaatcat gccgccacgc
      301 gatcaagttt cgcgtgtcac aaaaatgctc ggagacgaat tcggaacagc atcaaacata
      361 aaaagcagag tcaaccgtca gtcagttttg ggtgccatta catcggccca acaacggctc
      421 aagctctata acaaagtccc cccaaacgga ctcgttcttt acaccggaac cattgtaacc
      481 gaagatggaa aggaaaaaaa agttactatt gatttcgaac cgtttcggcc cattaacgcg
      541 tctctttatc tttgtgataa caaatttcac acagaagctt tgaatgaact gttggaatcg
      601 gatgataagt ttggttttat cgttatggat ggaaacggga ccttgtttgg aactttgagc
      661 ggtaacacac gtgaagtact acacaaattt agtgtcgatt taccgaaaaa gcatggacga
      721 ggagggcaat ctgcgttacg atttgctcgt ttacgaatgg aaaagagaca caattacgtg
      781 aggaagtgtg ctgagctggc gactcaattt tatatcaatc cttcaactag tcagcctaat
      841 gtttcaggga tgatacttgc agggtctgct gattttaaaa ccgagcttag tcaatctgat
      901 atgtttgacc cgcgtcttca ggctaaaatc ttgaacgttg tcgatgtttc ttatggtggt
      961 gaaaacgggt ttaatcaagc gatagagtta tcggctgaaa tacttgctaa cgttaagttt
     1021 atacaggaga aacgtttgat tggtaagtat tttgaggaga ttagtcaaga taccgggaaa
     1081 tatgtttttg gtgtggatga tacgttaaag gctcttgaaa tgggtgcggt tgatatactt
     1141 atagtttggg aaaatcttga tattaatcga tttacactta agaatgtaac aactggtgag
     1201 gtgattataa agcattttaa taaggagcaa gagggtatac aaaaaaactt tagggattcg
     1261 aacacgaatg ctgaacttga agtgcaagaa aaaatgtcgt tgcttgaatg gtttgctaat
     1321 gagtatcgta agtttggttg tacgcttcag tttgttacta ataagtcgca agaggggtct
     1381 caattttgta gaggttttgg tggtattggg gggatccttc gttatcagct ggatattcga
     1441 tcgtttgatg aggtgtctga tgatgaattg tatgatgatt ctgaatagca atcaataatc
     1501 ggttatacgc cggtgcaggc gaatgaggag aaatgcctgc accgggcgcg agctctcgca
     1561 catgaggctc ctggtgttcc tgtatcatct gttcgtgaga ttagcgttga gctattggag
     1621 ataagtgatc taaacagaag aggtgctgat cctgttttct ctaaggaact gcagagccgt
     1681 gctgggcccg ttttagctcc ataccaaact gttcgtgtaa gcaaagcttg agtttatgaa
     1741 acctttaatg cagtgcttat gaagaagctt cgatatttac atgctttcgg ttaataatgt
     1801 tatccaagta taagaaggat taagtttatc gtgtttgcca ataataaata agctacatgg
     1861 gtatgtcatg tagaagatct aagcgtcagt cgacactcac gaacttgtta tgcggatttt
     1921 gtcatcctgg atttccttgt atgttatttc gtgttgtgat taaattgatt gaaagttggt
     1981 ttggttga
//
LOCUS       XM_071829894            1991 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic peptide chain
            release factor subunit 1-2-like (LOC139839747), transcript variant
            X2, mRNA.
ACCESSION   XM_071829894
VERSION     XM_071829894.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1991
                     /gene="LOC139839747"
                     /note="eukaryotic peptide chain release factor subunit
                     1-2-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 34 Proteins"
                     /db_xref="GeneID:139839747"
     CDS             178..1488
                     /gene="LOC139839747"
                     /codon_start=1
                     /product="eukaryotic peptide chain release factor subunit
                     1-2-like"
                     /protein_id="XP_071685995.1"
                     /db_xref="GeneID:139839747"
                     /translation="MADAHDTDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQV
                     SRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTE
                     DGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTL
                     SGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKCAELATQFYINPSTS
                     QPNVSGMILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEIL
                     ANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVDILIVWENLDINRFTL
                     KNVTTGEVIIKHFNKEQEGIQKNFRDSNTNAELEVQEKMSLLEWFANEYRKFGCTLQF
                     VTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDEVSDDELYDDSE"
     misc_feature    211..1431
                     /gene="LOC139839747"
                     /note="peptide chain release factor 1, archaeal and
                     eukaryotic forms; Region: aRF1/eRF1; cl42864"
                     /db_xref="CDD:456209"
     polyA_site      1991
                     /gene="LOC139839747"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgatgatcgg aaattctagt tacgcgtata agaatatatg caacacaact gagatccaaa
       61 atttcatttt catttcaccc aacaaaaaaa taaaaaataa aaataaaaaa attcatcctt
      121 gcaaattctc attcaggtag ttatttaact gctgtgacag tttcagtcac ttaaaagatg
      181 gctgacgctc acgataccga caagaacatc gagatatgga aaatcaaaaa acttattaaa
      241 gcactcgaag cagcacgtgg taacggtacc agcatgattt ctctaatcat gccgccacgc
      301 gatcaagttt cgcgtgtcac aaaaatgctc ggagacgaat tcggaacagc atcaaacata
      361 aaaagcagag tcaaccgtca gtcagttttg ggtgccatta catcggccca acaacggctc
      421 aagctctata acaaagtccc cccaaacgga ctcgttcttt acaccggaac cattgtaacc
      481 gaagatggaa aggaaaaaaa agttactatt gatttcgaac cgtttcggcc cattaacgcg
      541 tctctttatc tttgtgataa caaatttcac acagaagctt tgaatgaact gttggaatcg
      601 gatgataagt ttggttttat cgttatggat ggaaacggga ccttgtttgg aactttgagc
      661 ggtaacacac gtgaagtact acacaaattt agtgtcgatt taccgaaaaa gcatggacga
      721 ggagggcaat ctgcgttacg atttgctcgt ttacgaatgg aaaagagaca caattacgtg
      781 aggaagtgtg ctgagctggc gactcaattt tatatcaatc cttcaactag tcagcctaat
      841 gtttcaggga tgatacttgc agggtctgct gattttaaaa ccgagcttag tcaatctgat
      901 atgtttgacc cgcgtcttca ggctaaaatc ttgaacgttg tcgatgtttc ttatggtggt
      961 gaaaacgggt ttaatcaagc gatagagtta tcggctgaaa tacttgctaa cgttaagttt
     1021 atacaggaga aacgtttgat tggtaagtat tttgaggaga ttagtcaaga taccgggaaa
     1081 tatgtttttg gtgtggatga tacgttaaag gctcttgaaa tgggtgcggt tgatatactt
     1141 atagtttggg aaaatcttga tattaatcga tttacactta agaatgtaac aactggtgag
     1201 gtgattataa agcattttaa taaggagcaa gagggtatac aaaaaaactt tagggattcg
     1261 aacacgaatg ctgaacttga agtgcaagaa aaaatgtcgt tgcttgaatg gtttgctaat
     1321 gagtatcgta agtttggttg tacgcttcag tttgttacta ataagtcgca agaggggtct
     1381 caattttgta gaggttttgg tggtattggg gggatccttc gttatcagct ggatattcga
     1441 tcgtttgatg aggtgtctga tgatgaattg tatgatgatt ctgaatagca atcaataatc
     1501 ggttatacgc cggtgcaggc gaatgaggag aaatgcctgc accgggcgcg agctctcgca
     1561 catgaggctc ctggtgttcc tgtatcatct gttcgtgaga ttagcgttga gcagctattg
     1621 gagataagtg atctaaacag aagaggtgct gatcctgttt tctctaagga actgcagagc
     1681 cgtgctgggc ccgttttagc tccataccaa actgttcgtg taagcaaagc ttgagtttat
     1741 gaaaccttta atgcagtgct tatgaagaag cttcgatatt tacatgcttt cggttaataa
     1801 tgttatccaa gtataagaag gattaagttt atcgtgtttg ccaataataa ataagctaca
     1861 tgggtatgtc atgtagaaga tctaagcgtc agtcgacact cacgaacttg ttatgcggat
     1921 tttgtcatcc tggatttcct tgtatgttat ttcgtgttgt gattaaattg attgaaagtt
     1981 ggtttggttg a
//
LOCUS       XM_071829895             517 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839748), mRNA.
ACCESSION   XM_071829895
VERSION     XM_071829895.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..517
                     /gene="LOC139839748"
                     /note="uncharacterized LOC139839748; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839748"
     CDS             6..371
                     /gene="LOC139839748"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071685996.1"
                     /db_xref="GeneID:139839748"
                     /translation="MEKTVMEIHGMLKTAEANMAKAKPATTVLAIREGGIKKKKNKAK
                     GKDKGKGKVGTSNFKPKPKGIANSSTSKIPQTKSPEEAICFFCGDKGHWRRNCTKYLK
                     GLNELRAKGVAVPSGTHKK"
     misc_feature    <168..>296
                     /gene="LOC139839748"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]; Region:
                     COG5222"
                     /db_xref="CDD:227547"
ORIGIN      
        1 acaatatgga gaaaacagtc atggaaatcc atggcatgtt gaaaaccgct gaggctaaca
       61 tggccaaagc taaacccgca actaccgtct tagccattcg tgaaggtggg attaagaaga
      121 agaaaaacaa agcaaagggc aaagacaagg gcaagggtaa ggttggcacg tccaacttca
      181 aacctaaacc taagggcatt gctaactctt ctacttcaaa gatcccacaa accaagtctc
      241 ctgaagaagc aatatgcttc ttttgcgggg ataaaggaca ttggaggcgc aattgtacca
      301 agtacttgaa gggacttaat gaactacggg ctaagggagt cgccgtacct tcagggactc
      361 acaagaagta ggaaactgaa gaccggagag ctcaatctaa tcatggggaa taagaacgtt
      421 gcctctgttg acatgattgg agaatacaag ctttcttttg attctggttt atgtattgtt
      481 ttatctaatg tttgctacag tgccgaaatg gcaagaa
//
LOCUS       XM_071829896            2719 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SPA1-RELATED 4-like
            (LOC139839749), transcript variant X1, mRNA.
ACCESSION   XM_071829896
VERSION     XM_071829896.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2719
                     /gene="LOC139839749"
                     /note="protein SPA1-RELATED 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139839749"
     CDS             539..2710
                     /gene="LOC139839749"
                     /codon_start=1
                     /product="protein SPA1-RELATED 4-like isoform X1"
                     /protein_id="XP_071685997.1"
                     /db_xref="GeneID:139839749"
                     /translation="MNNSSHDHGHVNHDHDHDHGIKRVVRPLETKEVSLRQWLDDTKR
                     VVNPLECLHIFTQIAKIVNLAHSQGYVVHNIRPSCFIMSSFNNVSFIESASSSDSGSD
                     SYQDVTSSQTSGNVFNKVSEHVRSEFDVGQTEEQKHVFPMKQILKMETNWYTSPEEAA
                     GGQSCCASDVYRLGVLLFELYYPCSSPEEKNAAMSNLRHRIFPPQLHFKWPREVFLLL
                     RSLHPDPTSRPKIDEVLQSEFLNELKENLDERQVAIELEEKVVEQEMLLEFLLMMQKR
                     KQEAAHYLQRDVSLLSSDVQEVSNLQASIRIKRGFEPSSSINISQNDEFSSSVYRKRN
                     RTPEENQENAVTNSSRLMKNFKKLESAYFSTRNKSSIPIGKQMFSNRGMHPFLEGLSK
                     YLSYSRLKVKADLKQGDLLNSTSLVYSLRFDRDGEFFATAGVNKKIKVFEYDSILNEN
                     QDIHFPIVEVPTRSMISSICWNPYIKSQIASCNFEGVVQVWDVTQNRLCVELREHERR
                     AWSVDFATDPKLLASGSDDGSLKLWNINQRASLGTIKSRANVCCVQFPSESSNYIAFG
                     SADHQVYYYDLRNLSTPLCTLIGHQKTVSHIKFIDSTTLVSSSTDNTLKLWDLSTITS
                     QVIDSPLQSFTGHTNVKNFVGLSVSEGYIATGSETNEVYIYHKAFPMPALSYKFSTTD
                     PITGNEVDDNEQFMSSLCWRNRSSTLVAANSKGNIKVLEMV"
     misc_feature    596..2707
                     /gene="LOC139839749"
                     /note="protein SPA1-RELATED; Provisional; Region:
                     PLN00181"
                     /db_xref="CDD:177776"
     misc_feature    1790..1921
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1934..2047
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2066..2170
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2186..2302
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2318..2443
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2456..2533
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2624..2695
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 ctataatatg tcatcaatgc cttatacgat agcatgaacc actcattagt ttgctggtac
       61 tacaacgttt tgagttcata taaaggataa tggcaaatac tttattaaaa tcaagtgggt
      121 gtggtgttaa tgggcgaagt tgtgccacgt ggattaactt gaaacaaaag gcaataatga
      181 atgaaactag tgatgcttca gtctaaggct tcaaaagaac ttgccaagtt aacacagtat
      241 catcgtcata tgatttctgg tcttatttaa ttcattttca tcactgatat tttatttatt
      301 tcatttcaga aacatgttta tttacaaaca atttaattga aaaaataaaa aagttcaact
      361 gttttccagg cagatactat ttgtctattt atgcagctga aattctggac cacagtttac
      421 tttttatcca caaaaagcat tttgaattct atggttctta tttaacacaa ccatatagat
      481 ttctactaat aagtaactga atgttgtctt cttatgaagc tacaattata taggtgatat
      541 gaataactct tctcatgatc atggtcatgt taaccatgat catgatcatg atcatggtat
      601 caaacgggtt gttaggccgt tagaaacgaa agaagttagt ttaagacaat ggttagacga
      661 cacaaaacgt gtcgttaatc cactcgaatg cttacatata tttacgcaga tagcgaaaat
      721 tgtgaactta gcacattcac aaggatatgt tgttcataat attcgacctt cgtgctttat
      781 tatgtcatcg tttaataacg tctcgtttat agaatccgcg tccagctcag attctggttc
      841 agactcttac caagatgtaa ccagcagcca aacatccgga aatgttttta ataaagtgtc
      901 agaacacgta cgttccgaat ttgacgtggg acaaacagaa gaacagaaac atgtgtttcc
      961 aatgaaacag atactaaaaa tggaaacaaa ttggtataca agtccagaag aggctgctgg
     1021 tggtcaaagc tgttgcgcgt ctgatgttta tcgtttaggg gttcttcttt ttgagttata
     1081 ttacccttgt agttcaccgg aagaaaagaa cgcagccatg tctaacctca gacaccgaat
     1141 atttccgccg caattacatt tcaagtggcc gagagaagtc ttccttttac tgcggtcatt
     1201 gcatcccgac ccaacaagca ggccaaagat agatgaagtg ttacaaagtg agtttcttaa
     1261 tgaacttaaa gaaaatttag acgaacgaca agttgcaatc gagcttgaag aaaaagtcgt
     1321 cgagcaagaa atgttgctcg aatttcttct catgatgcaa aaacgaaaac aagaagctgc
     1381 gcattacctg caacgagatg tttcactttt atcttctgat gtacaagaag tttcaaacct
     1441 gcaagcgtct attaggatta aacgaggttt tgaaccttca tcttcaataa atatttctca
     1501 aaacgatgaa ttttcaagct cggtgtacag aaaacgcaac agaacacccg aagaaaatca
     1561 agaaaacgct gttacaaata gttctagatt aatgaaaaac tttaagaaac tagaatcggc
     1621 ttacttttcg accaggaaca agagttcgat accaatcggc aaacagatgt ttagtaatcg
     1681 agggatgcat ccctttttgg agggactgtc taaatacctt tcgtacagta gattaaaagt
     1741 caaagctgac ttaaaacaag gtgatttatt aaactctaca agccttgtat attcgttgag
     1801 gtttgatcgt gatggggagt tttttgcaac tgctggtgta aataagaaga tcaaagtatt
     1861 tgaatatgat tcgatcttga acgagaatca agatatccat tttccgatag ttgaagttcc
     1921 gacaagatca atgataagca gtatttgttg gaatccttat attaaaagcc agattgcttc
     1981 atgtaatttt gaaggtgtcg tgcaggtatg ggatgttacc caaaatcgat tatgcgtaga
     2041 attgagagag catgagagac gtgcgtggtc tgtcgatttt gcaacagatc cgaagttgct
     2101 agccagtgga agtgatgatg gttcgcttaa gctctggaac ataaatcaga gagccagtct
     2161 tggtaccatt aaatcaaggg cgaatgtgtg ctgtgttcag tttccttccg aatctagtaa
     2221 ttatattgca tttggttccg cagatcatca ggtgtattac tacgatttac gaaatttgag
     2281 tacgccactt tgcacactga ttggacacca gaaaaccgtt agccacatca agtttatcga
     2341 ttcaacaact cttgtatcgt cgtccactga taacacactc aagctttggg atttgtcaac
     2401 cattacgtct caagttattg acagcccgct tcagtcattc acgggccaca ccaatgtcaa
     2461 aaattttgtt ggtttatcag tatcagaagg atatatcgct actggttcag aaacaaacga
     2521 ggtttatatc taccacaagg ctttccccat gcccgcgttg tcgtataaat tcagcaccac
     2581 agatccgata acaggaaatg aagtggacga caatgaacag ttcatgtcat ccttatgttg
     2641 gcgtaatcgg tcctctactt tggttgctgc taattcgaag ggaaatataa aagttttgga
     2701 gatggtttag tctttttta
//
LOCUS       XM_071829897            1769 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SPA1-RELATED 4-like
            (LOC139839749), transcript variant X2, mRNA.
ACCESSION   XM_071829897
VERSION     XM_071829897.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1769
                     /gene="LOC139839749"
                     /note="protein SPA1-RELATED 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839749"
     CDS             168..1760
                     /gene="LOC139839749"
                     /codon_start=1
                     /product="protein SPA1-RELATED 4-like isoform X2"
                     /protein_id="XP_071685998.1"
                     /db_xref="GeneID:139839749"
                     /translation="MSNLRHRIFPPQLHFKWPREVFLLLRSLHPDPTSRPKIDEVLQS
                     EFLNELKENLDERQVAIELEEKVVEQEMLLEFLLMMQKRKQEAAHYLQRDVSLLSSDV
                     QEVSNLQASIRIKRGFEPSSSINISQNDEFSSSVYRKRNRTPEENQENAVTNSSRLMK
                     NFKKLESAYFSTRNKSSIPIGKQMFSNRGMHPFLEGLSKYLSYSRLKVKADLKQGDLL
                     NSTSLVYSLRFDRDGEFFATAGVNKKIKVFEYDSILNENQDIHFPIVEVPTRSMISSI
                     CWNPYIKSQIASCNFEGVVQVWDVTQNRLCVELREHERRAWSVDFATDPKLLASGSDD
                     GSLKLWNINQRASLGTIKSRANVCCVQFPSESSNYIAFGSADHQVYYYDLRNLSTPLC
                     TLIGHQKTVSHIKFIDSTTLVSSSTDNTLKLWDLSTITSQVIDSPLQSFTGHTNVKNF
                     VGLSVSEGYIATGSETNEVYIYHKAFPMPALSYKFSTTDPITGNEVDDNEQFMSSLCW
                     RNRSSTLVAANSKGNIKVLEMV"
     misc_feature    <168..1757
                     /gene="LOC139839749"
                     /note="protein SPA1-RELATED; Provisional; Region:
                     PLN00181"
                     /db_xref="CDD:177776"
     misc_feature    840..971
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    984..1097
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1116..1220
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1236..1352
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1368..1493
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1506..1583
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1674..1745
                     /gene="LOC139839749"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 aacagaagaa cagaaacatg tgtttccaat gaaacagata ctaaaaatgg aaacaaattg
       61 gtatacaagt ccagaagagg ctgctggtgg tcaaagctgt tgcgcgtctg atgtttatcg
      121 tttaggggtt cttctttttg agttcaccgg aagaaaagaa cgcagccatg tctaacctca
      181 gacaccgaat atttccgccg caattacatt tcaagtggcc gagagaagtc ttccttttac
      241 tgcggtcatt gcatcccgac ccaacaagca ggccaaagat agatgaagtg ttacaaagtg
      301 agtttcttaa tgaacttaaa gaaaatttag acgaacgaca agttgcaatc gagcttgaag
      361 aaaaagtcgt cgagcaagaa atgttgctcg aatttcttct catgatgcaa aaacgaaaac
      421 aagaagctgc gcattacctg caacgagatg tttcactttt atcttctgat gtacaagaag
      481 tttcaaacct gcaagcgtct attaggatta aacgaggttt tgaaccttca tcttcaataa
      541 atatttctca aaacgatgaa ttttcaagct cggtgtacag aaaacgcaac agaacacccg
      601 aagaaaatca agaaaacgct gttacaaata gttctagatt aatgaaaaac tttaagaaac
      661 tagaatcggc ttacttttcg accaggaaca agagttcgat accaatcggc aaacagatgt
      721 ttagtaatcg agggatgcat ccctttttgg agggactgtc taaatacctt tcgtacagta
      781 gattaaaagt caaagctgac ttaaaacaag gtgatttatt aaactctaca agccttgtat
      841 attcgttgag gtttgatcgt gatggggagt tttttgcaac tgctggtgta aataagaaga
      901 tcaaagtatt tgaatatgat tcgatcttga acgagaatca agatatccat tttccgatag
      961 ttgaagttcc gacaagatca atgataagca gtatttgttg gaatccttat attaaaagcc
     1021 agattgcttc atgtaatttt gaaggtgtcg tgcaggtatg ggatgttacc caaaatcgat
     1081 tatgcgtaga attgagagag catgagagac gtgcgtggtc tgtcgatttt gcaacagatc
     1141 cgaagttgct agccagtgga agtgatgatg gttcgcttaa gctctggaac ataaatcaga
     1201 gagccagtct tggtaccatt aaatcaaggg cgaatgtgtg ctgtgttcag tttccttccg
     1261 aatctagtaa ttatattgca tttggttccg cagatcatca ggtgtattac tacgatttac
     1321 gaaatttgag tacgccactt tgcacactga ttggacacca gaaaaccgtt agccacatca
     1381 agtttatcga ttcaacaact cttgtatcgt cgtccactga taacacactc aagctttggg
     1441 atttgtcaac cattacgtct caagttattg acagcccgct tcagtcattc acgggccaca
     1501 ccaatgtcaa aaattttgtt ggtttatcag tatcagaagg atatatcgct actggttcag
     1561 aaacaaacga ggtttatatc taccacaagg ctttccccat gcccgcgttg tcgtataaat
     1621 tcagcaccac agatccgata acaggaaatg aagtggacga caatgaacag ttcatgtcat
     1681 ccttatgttg gcgtaatcgg tcctctactt tggttgctgc taattcgaag ggaaatataa
     1741 aagttttgga gatggtttag tctttttta
//
LOCUS       XM_071829898             792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DCC family protein
            At1g52590, chloroplastic (LOC139839750), transcript variant X1,
            mRNA.
ACCESSION   XM_071829898
VERSION     XM_071829898.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..792
                     /gene="LOC139839750"
                     /note="DCC family protein At1g52590, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139839750"
     CDS             105..650
                     /gene="LOC139839750"
                     /codon_start=1
                     /product="DCC family protein At1g52590, chloroplastic
                     isoform X1"
                     /protein_id="XP_071685999.1"
                     /db_xref="GeneID:139839750"
                     /translation="MAMIPAAPSFGASSAQIRLLPPIVHTTRRLSAIPANLSSSARGG
                     EAVDWVDATSSFFEQDTRPIMLFDGVCNLCNGGVKFVRDNDRQRKIRFEALQSDAGRN
                     LLRRSGRAPDDISSVVLVEQNRSYIKSEAVLKIMEYIDLPFPQLAFFLQFVPLFIRDI
                     VYENIADNRYAVFGRSETCEL"
     misc_feature    300..629
                     /gene="LOC139839750"
                     /note="DCC1-like thiol-disulfide oxidoreductase; Region:
                     DCC1-like; pfam04134"
                     /db_xref="CDD:461189"
     polyA_site      792
                     /gene="LOC139839750"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aagtatactc ccacaatatt gaccattttt tcgaaaatat gatagaattt taacccgaag
       61 aaaaacaata gggcgctaaa ataatcgttc ctcaatttca ttttatggcg atgattccgg
      121 cagctccttc ttttggtgct agcagtgcac agattcgttt gttaccaccg atcgtacaca
      181 ccactcgccg cctatctgca attccggcca acctatcttc ttcggcgcgc ggcggcgaag
      241 cggtggattg ggtggatgcg acatctagct tcttcgaaca agatactaga cctatcatgt
      301 tatttgacgg tgtctgcaac ttatgtaacg gaggtgtgaa gtttgtacgt gataatgaca
      361 ggcaaaggaa aatacggttt gaagccctac aaagcgatgc aggcaggaat ctcctacgga
      421 ggtctggaag agctcctgac gatatttcaa gtgttgtact tgtcgagcag aatcgatcat
      481 atatcaagtc agaagctgtg ttgaagatca tggagtacat agacttgccc tttcctcagc
      541 tagcgttctt tcttcagttt gtacctttat tcatcaggga tatcgtgtat gaaaacattg
      601 cggataatcg ttatgctgta tttggtcgtt cagaaacatg tgaactttag ggtatatatt
      661 ttaaaggtaa tctttacgta caattaactg cttaactaat gaagctgagt tgtattgtta
      721 attacttaaa atgtgaacta gcaaattaat gttcactgct tttatgtcca tgtcatatta
      781 tgctgtcata ca
//
LOCUS       XR_011757054             971 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DCC family protein
            At1g52590, chloroplastic (LOC139839750), transcript variant X2,
            misc_RNA.
ACCESSION   XR_011757054
VERSION     XR_011757054.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..971
                     /gene="LOC139839750"
                     /note="DCC family protein At1g52590, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139839750"
     misc_RNA        1..971
                     /gene="LOC139839750"
                     /product="DCC family protein At1g52590, chloroplastic,
                     transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839750"
ORIGIN      
        1 caagtatact cccacaatat tgaccatttt ttcgaaaata tgatagaatt ttaacccgaa
       61 gaaaaacaat agggcgctaa aataatcgtt cctcaatttc attttatggc gatgattccg
      121 gcagctcctt cttttggtgc tagcagtgca cagattcgtt tgttaccacc gatcgtacac
      181 accactcgcc gcctatctgc aattccggcc aacctatctt cttcggcgcg cggcggcgaa
      241 gcggtggatt gggtggatgc gacatctagc ttcttcgaac aagatactag acctatcatg
      301 ttatttgacg gtgtctgcaa cttatgtaac ggaggtgtga agtttgtacg tgataatgac
      361 aggcaaagga aaatacggtt tgaagcccta caaagcgatg caggcaggaa tctcctacgg
      421 aggtctggaa gagctcctga cgatatttca agtgttgtac ttgtcgagca gaatcgatca
      481 tatatcaagt cagaagctgt gttgaagatc atggagtaca tagacttgcc ctttcctcag
      541 ctagcgttct ttcttcagtt tgtaccttta ttcatcaggg atatcgtgta tgaaaacatt
      601 gcggataatc gttatgctgt atttggtcgt tcagaaacat gtgaacttta gggtatatat
      661 tttaaagttc ttaacatcta cattttctac cacatcagtt cctcccaagg atccaatact
      721 acacgaaaag ggtaaaggta tacctggacg tatatattcg aaggcttgca tggaccgctg
      781 aaagttatag gcttcaagaa aaacgtcact cctcttggta tgactaatat actcctacga
      841 ttcccttgcg attggcaagc cgctttccat gccttcataa aagcctgtaa tatatatttg
      901 catcacattt atgtgtgttt tgaatataga ttctaattct gtgttataga tttagtaaaa
      961 ttgtactata a
//
LOCUS       XM_071829899             908 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DCC family protein
            At1g52590, chloroplastic (LOC139839750), transcript variant X3,
            mRNA.
ACCESSION   XM_071829899
VERSION     XM_071829899.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..908
                     /gene="LOC139839750"
                     /note="DCC family protein At1g52590, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139839750"
     CDS             106..651
                     /gene="LOC139839750"
                     /codon_start=1
                     /product="DCC family protein At1g52590, chloroplastic
                     isoform X1"
                     /protein_id="XP_071686000.1"
                     /db_xref="GeneID:139839750"
                     /translation="MAMIPAAPSFGASSAQIRLLPPIVHTTRRLSAIPANLSSSARGG
                     EAVDWVDATSSFFEQDTRPIMLFDGVCNLCNGGVKFVRDNDRQRKIRFEALQSDAGRN
                     LLRRSGRAPDDISSVVLVEQNRSYIKSEAVLKIMEYIDLPFPQLAFFLQFVPLFIRDI
                     VYENIADNRYAVFGRSETCEL"
     misc_feature    301..630
                     /gene="LOC139839750"
                     /note="DCC1-like thiol-disulfide oxidoreductase; Region:
                     DCC1-like; pfam04134"
                     /db_xref="CDD:461189"
     polyA_site      908
                     /gene="LOC139839750"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caagtatact cccacaatat tgaccatttt ttcgaaaata tgatagaatt ttaacccgaa
       61 gaaaaacaat agggcgctaa aataatcgtt cctcaatttc attttatggc gatgattccg
      121 gcagctcctt cttttggtgc tagcagtgca cagattcgtt tgttaccacc gatcgtacac
      181 accactcgcc gcctatctgc aattccggcc aacctatctt cttcggcgcg cggcggcgaa
      241 gcggtggatt gggtggatgc gacatctagc ttcttcgaac aagatactag acctatcatg
      301 ttatttgacg gtgtctgcaa cttatgtaac ggaggtgtga agtttgtacg tgataatgac
      361 aggcaaagga aaatacggtt tgaagcccta caaagcgatg caggcaggaa tctcctacgg
      421 aggtctggaa gagctcctga cgatatttca agtgttgtac ttgtcgagca gaatcgatca
      481 tatatcaagt cagaagctgt gttgaagatc atggagtaca tagacttgcc ctttcctcag
      541 ctagcgttct ttcttcagtt tgtaccttta ttcatcaggg atatcgtgta tgaaaacatt
      601 gcggataatc gttatgctgt atttggtcgt tcagaaacat gtgaacttta gggtatatat
      661 tttaaagggt aaaggtatac ctggacgtat atattcgaag gcttgcatgg accgctgaaa
      721 gttataggct tcaagaaaaa cgtcactcct cttggtatga ctaatatact cctacgattc
      781 ccttgcgatt ggcaagccgc tttccatgcc ttcataaaag cctgtaatat atatttgcat
      841 cacatttatg tgtgttttga atatagattc taattctgtg ttatagattt agtaaaattg
      901 tactataa
//
LOCUS       XM_071829900             940 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DCC family protein
            At1g52590, chloroplastic (LOC139839750), transcript variant X4,
            mRNA.
ACCESSION   XM_071829900
VERSION     XM_071829900.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..940
                     /gene="LOC139839750"
                     /note="DCC family protein At1g52590, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139839750"
     CDS             106..651
                     /gene="LOC139839750"
                     /codon_start=1
                     /product="DCC family protein At1g52590, chloroplastic
                     isoform X1"
                     /protein_id="XP_071686001.1"
                     /db_xref="GeneID:139839750"
                     /translation="MAMIPAAPSFGASSAQIRLLPPIVHTTRRLSAIPANLSSSARGG
                     EAVDWVDATSSFFEQDTRPIMLFDGVCNLCNGGVKFVRDNDRQRKIRFEALQSDAGRN
                     LLRRSGRAPDDISSVVLVEQNRSYIKSEAVLKIMEYIDLPFPQLAFFLQFVPLFIRDI
                     VYENIADNRYAVFGRSETCEL"
     misc_feature    301..630
                     /gene="LOC139839750"
                     /note="DCC1-like thiol-disulfide oxidoreductase; Region:
                     DCC1-like; pfam04134"
                     /db_xref="CDD:461189"
     polyA_site      940
                     /gene="LOC139839750"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caagtatact cccacaatat tgaccatttt ttcgaaaata tgatagaatt ttaacccgaa
       61 gaaaaacaat agggcgctaa aataatcgtt cctcaatttc attttatggc gatgattccg
      121 gcagctcctt cttttggtgc tagcagtgca cagattcgtt tgttaccacc gatcgtacac
      181 accactcgcc gcctatctgc aattccggcc aacctatctt cttcggcgcg cggcggcgaa
      241 gcggtggatt gggtggatgc gacatctagc ttcttcgaac aagatactag acctatcatg
      301 ttatttgacg gtgtctgcaa cttatgtaac ggaggtgtga agtttgtacg tgataatgac
      361 aggcaaagga aaatacggtt tgaagcccta caaagcgatg caggcaggaa tctcctacgg
      421 aggtctggaa gagctcctga cgatatttca agtgttgtac ttgtcgagca gaatcgatca
      481 tatatcaagt cagaagctgt gttgaagatc atggagtaca tagacttgcc ctttcctcag
      541 ctagcgttct ttcttcagtt tgtaccttta ttcatcaggg atatcgtgta tgaaaacatt
      601 gcggataatc gttatgctgt atttggtcgt tcagaaacat gtgaacttta gggtatatat
      661 tttaaagttc ctcccaagga tccaatacta cacgaaaagg gtaaaggtat acctggacgt
      721 atatattcga aggcttgcat ggaccgctga aagttatagg cttcaagaaa aacgtcactc
      781 ctcttggtat gactaatata ctcctacgat tcccttgcga ttggcaagcc gctttccatg
      841 ccttcataaa agcctgtaat atatatttgc atcacattta tgtgtgtttt gaatatagat
      901 tctaattctg tgttatagat ttagtaaaat tgtactataa
//
LOCUS       XM_071829901             791 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DCC family protein
            At1g52590, chloroplastic (LOC139839750), transcript variant X5,
            mRNA.
ACCESSION   XM_071829901
VERSION     XM_071829901.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..791
                     /gene="LOC139839750"
                     /note="DCC family protein At1g52590, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839750"
     CDS             110..649
                     /gene="LOC139839750"
                     /codon_start=1
                     /product="DCC family protein At1g52590, chloroplastic
                     isoform X2"
                     /protein_id="XP_071686002.1"
                     /db_xref="GeneID:139839750"
                     /translation="MAMIPAAPSFGASSAQIRLLPPIVHTTRRLSAIPANLSSSARGG
                     EAVDWVDATSSFFEQDTRPIMLFDGVCNLCNGGVKFVRDNDRKIRFEALQSDAGRNLL
                     RRSGRAPDDISSVVLVEQNRSYIKSEAVLKIMEYIDLPFPQLAFFLQFVPLFIRDIVY
                     ENIADNRYAVFGRSETCEL"
     misc_feature    305..628
                     /gene="LOC139839750"
                     /note="DCC1-like thiol-disulfide oxidoreductase; Region:
                     DCC1-like; pfam04134"
                     /db_xref="CDD:461189"
     polyA_site      791
                     /gene="LOC139839750"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tggacaagta tactcccaca atattgacca ttttttcgaa aatatgatag aattttaacc
       61 cgaagaaaaa caatagggcg ctaaaataat cgttcctcaa tttcatttta tggcgatgat
      121 tccggcagct ccttcttttg gtgctagcag tgcacagatt cgtttgttac caccgatcgt
      181 acacaccact cgccgcctat ctgcaattcc ggccaaccta tcttcttcgg cgcgcggcgg
      241 cgaagcggtg gattgggtgg atgcgacatc tagcttcttc gaacaagata ctagacctat
      301 catgttattt gacggtgtct gcaacttatg taacggaggt gtgaagtttg tacgtgataa
      361 tgacaggaaa atacggtttg aagccctaca aagcgatgca ggcaggaatc tcctacggag
      421 gtctggaaga gctcctgacg atatttcaag tgttgtactt gtcgagcaga atcgatcata
      481 tatcaagtca gaagctgtgt tgaagatcat ggagtacata gacttgccct ttcctcagct
      541 agcgttcttt cttcagtttg tacctttatt catcagggat atcgtgtatg aaaacattgc
      601 ggataatcgt tatgctgtat ttggtcgttc agaaacatgt gaactttagg gtatatattt
      661 taaaggtaat ctttacgtac aattaactgc ttaactaatg aagctgagtt gtattgttaa
      721 ttacttaaaa tgtgaactag caaattaatg ttcactgctt ttatgtccat gtcatattat
      781 gctgtcatac a
//
LOCUS       XM_071829902             517 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839751), mRNA.
ACCESSION   XM_071829902
VERSION     XM_071829902.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..517
                     /gene="LOC139839751"
                     /note="uncharacterized LOC139839751; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839751"
     CDS             6..371
                     /gene="LOC139839751"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686003.1"
                     /db_xref="GeneID:139839751"
                     /translation="MEKTVMEIHGMLKTAEANMAKAKPATTVLAIREGGIKKKKNKAK
                     GKDKGKGKVGTSNFKPKPKGIANSSTSKIPQTKSPEEAICFFCGDKGHWRRNCTKYLK
                     GLNELRAKGVAVPSGTHKK"
     misc_feature    <168..>296
                     /gene="LOC139839751"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]; Region:
                     COG5222"
                     /db_xref="CDD:227547"
ORIGIN      
        1 acaatatgga gaaaacagtc atggaaatcc atggcatgtt gaaaaccgct gaggctaaca
       61 tggccaaagc taaacccgca actaccgtct tagccattcg tgaaggtggg attaagaaga
      121 agaaaaacaa agcaaagggc aaagacaagg gcaagggtaa ggttggcacg tccaacttca
      181 aacctaaacc taagggcatt gctaactctt ctacttcaaa gatcccacaa accaagtctc
      241 ctgaagaagc aatatgcttc ttttgcgggg ataaaggaca ttggaggcgc aattgtacca
      301 agtacttgaa gggacttaat gaactacggg ctaagggagt cgccgtacct tcagggactc
      361 acaagaagta ggaaactgaa gaccggagag ctcaatctaa tcatggggaa taagaacgtt
      421 gcctctgttg acatgattgg agaatacaag ctttcttttg attctggttt atgtattgtt
      481 ttatctaatg tttgctacag tgccgaaatg gcaagaa
//
LOCUS       XR_011757055            3633 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X1, ncRNA.
ACCESSION   XR_011757055
VERSION     XR_011757055.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3633
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..3633
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgtcagg ttggacatat gaggtagatg
      841 gctgatggtt ttctttttct caagatgagt cttggagaag atataaccgt cgaatgcagg
      901 agtatgaaga agaaatgcag ggagtgtttc aatgggttgg aacaatggca agacaccaat
      961 tatcagccta acacaggtcc ttgcaagctt cttcatgctt aaaaagataa aatcttatat
     1021 gttacgataa caagttcccg ggatctgcga tatgatgcaa caacggcgac tttaaaatga
     1081 cgcttagtct ttcacagtaa gtattcattg aaaatacttt cacaactctt ttctcctcat
     1141 atcttcataa gtcaattggt accgatcatt agatatattt tacttaattt gcctctattt
     1201 gattttgttt ttctttgaat agtaatagat cagttgaact cgaataattc atttttagtt
     1261 ttcatttttt gacccattag cttagaatcg aggtgagtta gcgatcttca cattcacgat
     1321 gatttatttt atattagtac tcaaatgatc aagattacga attcaaatga gattagttct
     1381 caaattagat tagtttccat atgttgattc ctaaggtgat gcacaattga tttgcattgg
     1441 tgatttggtt gagaatgagg gaagtggaag ctaactgttc atgatggaac aactcatggt
     1501 gttggggttg ttgtgattat gaattcattg aagtcagttg gatggtaaac aaatgagagc
     1561 acaaacaata gttagcatta ttttcaatca agaggtagca taatggatgg gtcaacaagt
     1621 tgggttatgt accaaatctg gttatgtggt tgttaactgt tgtggcaggg tagttaactt
     1681 ttgtggttgt taagtgatta ggaatgtact aaatttggtc tttaactcgg tgaaaaatta
     1741 ctgatgttgt atttgtgagc ttaatagttt ccggatgtta gtaaatattg taaattatgg
     1801 agtataaata tatttatatg tagtgtggta taattgttgt gacatggcgg gtatgtgaat
     1861 agggaaattg aaactgccaa atgttgagat gaaagtaaag agatggtatg atgcattgta
     1921 tttataggta ttaatcttaa atttagctaa cattacattt gtatttctaa ttcaaaggtg
     1981 tcaaacttta ttgcctattt aaattgtcgt tctactctat tctgattttt tttgatgtat
     2041 ttttactcat agtttgatta gatgtttaca tggagatttt caagctctgt ttgattgtgt
     2101 gggacatgag tgtgaatgtt aaaattgaag cttataaagc cctttgtagg gtaggtatgg
     2161 catccaattt tattctgatc aatctcaaag aaagtcttac cacacttgga ttaaaataaa
     2221 ctttcatgtc aacttacaag aaagcgtttc aatttacatg catcgagtgc tggtagaact
     2281 tttatagatg ggttggagaa tgaaatcttc aaggtactcc gaattctctc aaaatgtgca
     2341 ataatgatat atagatggaa cttagaagtg gtaatctgag tgggtcacac tatatccata
     2401 tgtatatatg tgcccgtgta catacaatgc atatgtacct attcagtttt gtgggtacat
     2461 tgcatatgta taaacctggc ctgactgaat ttctttttta taggttccgt acatatatcg
     2521 taataaaaac tgaacgctgt caataatcaa tttatatatc tcattaaagg cttattctta
     2581 tgttatttcg atatattcat gaattcgtat ttctcattta aggttgattc taatgttatt
     2641 tggttatgac atattaatga gttatataca tgggttatat ccacctgatt attccataaa
     2701 actgttttta gtttgttcgt gataatcaaa agaagctgca cgtttggatg cagagagaac
     2761 tactgaaata gccatggcaa aggcatcaat ggttgatgat gttcagacaa aacccagggg
     2821 agctcatgaa acataatgag atatgtcagg tttaactgat tacatttttt tttctttttg
     2881 tgatagtgtt ttagtatata acggttcaaa attagttcat gttgaaatgg gtcaaaatta
     2941 gatcatgccg agacgggtca aaattagtat aggataaaac gggtcatgga gtagggtgag
     3001 gatatggact atttcggttt ggatcagagt gttaaaggct acaattttcg aatttggttt
     3061 catcattatt cttttgcaaa gcctgctcta tatggtcaat tttttatgca tactgatggg
     3121 ttgacttgtg ctgacatatt cactttttaa aagtcaaccg gccaactttt tgggggcttc
     3181 tcattctttt ttttcttttg gtaatgtggc taatggactt ggttgatgat ataggatgtg
     3241 taagtattga aaattttgat ggtggtacaa atggcggttg aaacaggaaa attcaaggac
     3301 aaagccaaac ctatcagtta catatggttt tcatcagttc agaaaagaaa atcgcttaaa
     3361 gtatggaaca aactggatat tcacctacaa tttcgacgaa cgcgctttct acctatattg
     3421 atgtttaggg aaatcttaca aaaatgttat tgcatttgct ttgttgaata acaatgtttg
     3481 gtatcaatat ctactatgat gttttgtttt aaatgttctt tatatagtat catcactacc
     3541 taatgtatta atacataaag atattagagt caaccgtgca acgcacgggc tcttaaagtc
     3601 tagtatatat atataacata aatttttatt gtt
//
LOCUS       XR_011757056            3625 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X2, ncRNA.
ACCESSION   XR_011757056
VERSION     XR_011757056.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3625
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3625
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..3625
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaaggta tcaaagttgc aggatgacat tcgagcacac
      421 gatcgactta gtaaataaaa aaaaaaaaac tgcacttttg gatgcagaga gaaccaatga
      481 atggcagaag catcaatggt tgatgatgtt cagaacaaaa atcaggagct cgtgaaacgg
      541 aatgagatat gtcagaccca tgtatctgag tatgccattg gtttgtggtt gagtatgtga
      601 tcaagattga aatttaagct tatgttttcg atggtaaagt caacttcaat ttgggccatc
      661 atgtttattt acggaatatg caaagctttt atcgacattg ttacgggaag tacattccat
      721 gatgcatatc acttgtggaa caaaagcatc aatggttgat gatgttcaaa actaaaacca
      781 ggcgctcatg aaacatgatg agaaatgtca ggttggacat atgaggtaga tggctgatgg
      841 ttttcttttt ctcaagatga gtcttggaga agatataacc gtcgaatgca ggagtatgaa
      901 gaagaaatgc agggagtgtt tcaatgggtt ggaacaatgg caagacacca attatcagcc
      961 taacacaggt ccttgcaagc ttcttcatgc ttaaaaagat aaaatcttat atgttacgat
     1021 aacaagttcc cgggatctgc gatatgatgc aacaacggcg actttaaaat gacgcttagt
     1081 ctttcacagt aagtattcat tgaaaatact ttcacaactc ttttctcctc atatcttcat
     1141 aagtcaattg gtaccgatca ttagatatat tttacttaat ttgcctctat ttgattttgt
     1201 ttttctttga atagtaatag atcagttgaa ctcgaataat tcatttttag ttttcatttt
     1261 ttgacccatt agcttagaat cgaggtgagt tagcgatctt cacattcacg atgatttatt
     1321 ttatattagt actcaaatga tcaagattac gaattcaaat gagattagtt ctcaaattag
     1381 attagtttcc atatgttgat tcctaaggtg atgcacaatt gatttgcatt ggtgatttgg
     1441 ttgagaatga gggaagtgga agctaactgt tcatgatgga acaactcatg gtgttggggt
     1501 tgttgtgatt atgaattcat tgaagtcagt tggatggtaa acaaatgaga gcacaaacaa
     1561 tagttagcat tattttcaat caagaggtag cataatggat gggtcaacaa gttgggttat
     1621 gtaccaaatc tggttatgtg gttgttaact gttgtggcag ggtagttaac ttttgtggtt
     1681 gttaagtgat taggaatgta ctaaatttgg tctttaactc ggtgaaaaat tactgatgtt
     1741 gtatttgtga gcttaatagt ttccggatgt tagtaaatat tgtaaattat ggagtataaa
     1801 tatatttata tgtagtgtgg tataattgtt gtgacatggc gggtatgtga atagggaaat
     1861 tgaaactgcc aaatgttgag atgaaagtaa agagatggta tgatgcattg tatttatagg
     1921 tattaatctt aaatttagct aacattacat ttgtatttct aattcaaagg tgtcaaactt
     1981 tattgcctat ttaaattgtc gttctactct attctgattt tttttgatgt atttttactc
     2041 atagtttgat tagatgttta catggagatt ttcaagctct gtttgattgt gtgggacatg
     2101 agtgtgaatg ttaaaattga agcttataaa gccctttgta gggtaggtat ggcatccaat
     2161 tttattctga tcaatctcaa agaaagtctt accacacttg gattaaaata aactttcatg
     2221 tcaacttaca agaaagcgtt tcaatttaca tgcatcgagt gctggtagaa cttttataga
     2281 tgggttggag aatgaaatct tcaaggtact ccgaattctc tcaaaatgtg caataatgat
     2341 atatagatgg aacttagaag tggtaatctg agtgggtcac actatatcca tatgtatata
     2401 tgtgcccgtg tacatacaat gcatatgtac ctattcagtt ttgtgggtac attgcatatg
     2461 tataaacctg gcctgactga atttcttttt tataggttcc gtacatatat cgtaataaaa
     2521 actgaacgct gtcaataatc aatttatata tctcattaaa ggcttattct tatgttattt
     2581 cgatatattc atgaattcgt atttctcatt taaggttgat tctaatgtta tttggttatg
     2641 acatattaat gagttatata catgggttat atccacctga ttattccata aaactgtttt
     2701 tagtttgttc gtgataatca aaagaagctg cacgtttgga tgcagagaga actactgaaa
     2761 tagccatggc aaaggcatca atggttgatg atgttcagac aaaacccagg ggagctcatg
     2821 aaacataatg agatatgtca ggtttaactg attacatttt tttttctttt tgtgatagtg
     2881 ttttagtata taacggttca aaattagttc atgttgaaat gggtcaaaat tagatcatgc
     2941 cgagacgggt caaaattagt ataggataaa acgggtcatg gagtagggtg aggatatgga
     3001 ctatttcggt ttggatcaga gtgttaaagg ctacaatttt cgaatttggt ttcatcatta
     3061 ttcttttgca aagcctgctc tatatggtca attttttatg catactgatg ggttgacttg
     3121 tgctgacata ttcacttttt aaaagtcaac cggccaactt tttgggggct tctcattctt
     3181 ttttttcttt tggtaatgtg gctaatggac ttggttgatg atataggatg tgtaagtatt
     3241 gaaaattttg atggtggtac aaatggcggt tgaaacagga aaattcaagg acaaagccaa
     3301 acctatcagt tacatatggt tttcatcagt tcagaaaaga aaatcgctta aagtatggaa
     3361 caaactggat attcacctac aatttcgacg aacgcgcttt ctacctatat tgatgtttag
     3421 ggaaatctta caaaaatgtt attgcatttg ctttgttgaa taacaatgtt tggtatcaat
     3481 atctactatg atgttttgtt ttaaatgttc tttatatagt atcatcacta cctaatgtat
     3541 taatacataa agatattaga gtcaaccgtg caacgcacgg gctcttaaag tctagtatat
     3601 atatataaca taaattttta ttgtt
//
LOCUS       XR_011757057            3628 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X3, ncRNA.
ACCESSION   XR_011757057
VERSION     XR_011757057.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3628
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3628
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..3628
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgttgga catatgaggt agatggctga
      841 tggttttctt tttctcaaga tgagtcttgg agaagatata accgtcgaat gcaggagtat
      901 gaagaagaaa tgcagggagt gtttcaatgg gttggaacaa tggcaagaca ccaattatca
      961 gcctaacaca ggtccttgca agcttcttca tgcttaaaaa gataaaatct tatatgttac
     1021 gataacaagt tcccgggatc tgcgatatga tgcaacaacg gcgactttaa aatgacgctt
     1081 agtctttcac agtaagtatt cattgaaaat actttcacaa ctcttttctc ctcatatctt
     1141 cataagtcaa ttggtaccga tcattagata tattttactt aatttgcctc tatttgattt
     1201 tgtttttctt tgaatagtaa tagatcagtt gaactcgaat aattcatttt tagttttcat
     1261 tttttgaccc attagcttag aatcgaggtg agttagcgat cttcacattc acgatgattt
     1321 attttatatt agtactcaaa tgatcaagat tacgaattca aatgagatta gttctcaaat
     1381 tagattagtt tccatatgtt gattcctaag gtgatgcaca attgatttgc attggtgatt
     1441 tggttgagaa tgagggaagt ggaagctaac tgttcatgat ggaacaactc atggtgttgg
     1501 ggttgttgtg attatgaatt cattgaagtc agttggatgg taaacaaatg agagcacaaa
     1561 caatagttag cattattttc aatcaagagg tagcataatg gatgggtcaa caagttgggt
     1621 tatgtaccaa atctggttat gtggttgtta actgttgtgg cagggtagtt aacttttgtg
     1681 gttgttaagt gattaggaat gtactaaatt tggtctttaa ctcggtgaaa aattactgat
     1741 gttgtatttg tgagcttaat agtttccgga tgttagtaaa tattgtaaat tatggagtat
     1801 aaatatattt atatgtagtg tggtataatt gttgtgacat ggcgggtatg tgaataggga
     1861 aattgaaact gccaaatgtt gagatgaaag taaagagatg gtatgatgca ttgtatttat
     1921 aggtattaat cttaaattta gctaacatta catttgtatt tctaattcaa aggtgtcaaa
     1981 ctttattgcc tatttaaatt gtcgttctac tctattctga ttttttttga tgtattttta
     2041 ctcatagttt gattagatgt ttacatggag attttcaagc tctgtttgat tgtgtgggac
     2101 atgagtgtga atgttaaaat tgaagcttat aaagcccttt gtagggtagg tatggcatcc
     2161 aattttattc tgatcaatct caaagaaagt cttaccacac ttggattaaa ataaactttc
     2221 atgtcaactt acaagaaagc gtttcaattt acatgcatcg agtgctggta gaacttttat
     2281 agatgggttg gagaatgaaa tcttcaaggt actccgaatt ctctcaaaat gtgcaataat
     2341 gatatataga tggaacttag aagtggtaat ctgagtgggt cacactatat ccatatgtat
     2401 atatgtgccc gtgtacatac aatgcatatg tacctattca gttttgtggg tacattgcat
     2461 atgtataaac ctggcctgac tgaatttctt ttttataggt tccgtacata tatcgtaata
     2521 aaaactgaac gctgtcaata atcaatttat atatctcatt aaaggcttat tcttatgtta
     2581 tttcgatata ttcatgaatt cgtatttctc atttaaggtt gattctaatg ttatttggtt
     2641 atgacatatt aatgagttat atacatgggt tatatccacc tgattattcc ataaaactgt
     2701 ttttagtttg ttcgtgataa tcaaaagaag ctgcacgttt ggatgcagag agaactactg
     2761 aaatagccat ggcaaaggca tcaatggttg atgatgttca gacaaaaccc aggggagctc
     2821 atgaaacata atgagatatg tcaggtttaa ctgattacat ttttttttct ttttgtgata
     2881 gtgttttagt atataacggt tcaaaattag ttcatgttga aatgggtcaa aattagatca
     2941 tgccgagacg ggtcaaaatt agtataggat aaaacgggtc atggagtagg gtgaggatat
     3001 ggactatttc ggtttggatc agagtgttaa aggctacaat tttcgaattt ggtttcatca
     3061 ttattctttt gcaaagcctg ctctatatgg tcaatttttt atgcatactg atgggttgac
     3121 ttgtgctgac atattcactt tttaaaagtc aaccggccaa ctttttgggg gcttctcatt
     3181 cttttttttc ttttggtaat gtggctaatg gacttggttg atgatatagg atgtgtaagt
     3241 attgaaaatt ttgatggtgg tacaaatggc ggttgaaaca ggaaaattca aggacaaagc
     3301 caaacctatc agttacatat ggttttcatc agttcagaaa agaaaatcgc ttaaagtatg
     3361 gaacaaactg gatattcacc tacaatttcg acgaacgcgc tttctaccta tattgatgtt
     3421 tagggaaatc ttacaaaaat gttattgcat ttgctttgtt gaataacaat gtttggtatc
     3481 aatatctact atgatgtttt gttttaaatg ttctttatat agtatcatca ctacctaatg
     3541 tattaataca taaagatatt agagtcaacc gtgcaacgca cgggctctta aagtctagta
     3601 tatatatata acataaattt ttattgtt
//
LOCUS       XR_011757058            3235 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X4, ncRNA.
ACCESSION   XR_011757058
VERSION     XR_011757058.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3235
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3235
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..3235
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgtcagg ttggacatat gaggtagatg
      841 gctgatggtt ttctttttct caagatgagt cttggagaag atataaccgt cgaatgcagg
      901 agtatgaaga agaaatgcag ggagtgtttc aatgggttgg aacaatggca agacaccaat
      961 tatcagccta acacaggtcc ttgcaagctt cttcatgctt aaaaagataa aatcttatat
     1021 gttacgataa caagttcccg ggatctgcga tatgatgcaa caacggcgac tttaaaatga
     1081 cgcttagtct ttcacagtaa gtattcattg aaaatacttt cacaactctt ttctcctcat
     1141 atcttcataa gtcaattggt accgatcatt agatatattt tacttaattt gcctctattt
     1201 gattttgttt ttctttgaat agtaatagat cagttgaact cgaataattc atttttagtt
     1261 ttcatttttt gacccattag cttagaatcg aggtgagtta gcgatcttca cattcacgat
     1321 gatttatttt atattagtac tcaaatgatc aagattacga attcaaatga gattagttct
     1381 caaattagat tagtttccat atgttgattc ctaaggtgat gcacaattga tttgcattgg
     1441 tgatttggtt gagaatgagg gaagtggaag ctaactgttc atgatggaac aactcatggt
     1501 gttggggttg ttgtgattat gaattcattg aagtcagttg gatggtaaac aaatgagagc
     1561 acaaacaata gttagcatta ttttcaatca agaggtagca taatggatgg gtcaacaagt
     1621 tgggttatgt accaaatctg gttatgtggt tgttaactgt tgtggcaggg tagttaactt
     1681 ttgtggttgt taagtgatta ggaatgtact aaatttggtc tttaactcgg tgaaaaatta
     1741 ctgatgttgt atttgtgagc ttaatagttt ccggatgtta gtaaatattg taaattatgg
     1801 agtataaata tatttatatg tagtgtggta taattgttgt gacatggcgg gtatgtgaat
     1861 agggaaattg aaactgccaa atgttgagat gaaagtaaag agatggtatg atgcattgta
     1921 tttataggta ttaatcttaa atttagctaa cattacattt gtatttctaa ttcaaaggtg
     1981 tcaaacttta ttgcctattt aaattgtcgt tctactctat tctgattttt tttgatgtat
     2041 ttttactcat agtttgatta gatgtttaca tggagatttt caagctctgt ttgattgtgt
     2101 gggacatgag tgtgaatgtt aaaattgaag cttataaagc cctttgtagg gtaggtatgg
     2161 catccaattt tattctgatc aatctcaaag aaagtcttac cacacttgga ttaaaataaa
     2221 ctttcatgtc aacttacaag aaagcgtttc aatttacatg catcgagtgc tggtagaact
     2281 tttatagatg ggttggagaa tgaaatcttc aagtttgttc gtgataatca aaagaagctg
     2341 cacgtttgga tgcagagaga actactgaaa tagccatggc aaaggcatca atggttgatg
     2401 atgttcagac aaaacccagg ggagctcatg aaacataatg agatatgtca ggtttaactg
     2461 attacatttt tttttctttt tgtgatagtg ttttagtata taacggttca aaattagttc
     2521 atgttgaaat gggtcaaaat tagatcatgc cgagacgggt caaaattagt ataggataaa
     2581 acgggtcatg gagtagggtg aggatatgga ctatttcggt ttggatcaga gtgttaaagg
     2641 ctacaatttt cgaatttggt ttcatcatta ttcttttgca aagcctgctc tatatggtca
     2701 attttttatg catactgatg ggttgacttg tgctgacata ttcacttttt aaaagtcaac
     2761 cggccaactt tttgggggct tctcattctt ttttttcttt tggtaatgtg gctaatggac
     2821 ttggttgatg atataggatg tgtaagtatt gaaaattttg atggtggtac aaatggcggt
     2881 tgaaacagga aaattcaagg acaaagccaa acctatcagt tacatatggt tttcatcagt
     2941 tcagaaaaga aaatcgctta aagtatggaa caaactggat attcacctac aatttcgacg
     3001 aacgcgcttt ctacctatat tgatgtttag ggaaatctta caaaaatgtt attgcatttg
     3061 ctttgttgaa taacaatgtt tggtatcaat atctactatg atgttttgtt ttaaatgttc
     3121 tttatatagt atcatcacta cctaatgtat taatacataa agatattaga gtcaaccgtg
     3181 caacgcacgg gctcttaaag tctagtatat atatataaca taaattttta ttgtt
//
LOCUS       XR_011757059            3214 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X5, ncRNA.
ACCESSION   XR_011757059
VERSION     XR_011757059.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3214
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..3214
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 ttttcaataa tgttttagtg tagtaggaaa aaaaatcttg gtcaaaatgt gtgcgggggc
       61 gtcatctgat atgagaggca tccgcaaaaa gccttagttt tgagtctgta attcaattgt
      121 gacatccata aaaagaaaac ccagacccat gtatctgagt atgccattgg tttgtggttg
      181 agtatgtgat caagattgaa atttaagctt atgttttcga tggtaaagtc aacttcaatt
      241 tgggccatca tgtttattta cggaatatgc aaagctttta tcgacattgt tacgggaagt
      301 acattccatg atgcatatca cttgtggaac aaaagcatca atggttgatg atgttcaaaa
      361 ctaaaaccag gcgctcatga aacatgatga gaaatgtcag gttggacata tgaggtagat
      421 ggctgatggt tttctttttc tcaagatgag tcttggagaa gatataaccg tcgaatgcag
      481 gagtatgaag aagaaatgca gggagtgttt caatgggttg gaacaatggc aagacaccaa
      541 ttatcagcct aacacaggtc cttgcaagct tcttcatgct taaaaagata aaatcttata
      601 tgttacgata acaagttccc gggatctgcg atatgatgca acaacggcga ctttaaaatg
      661 acgcttagtc tttcacagta agtattcatt gaaaatactt tcacaactct tttctcctca
      721 tatcttcata agtcaattgg taccgatcat tagatatatt ttacttaatt tgcctctatt
      781 tgattttgtt tttctttgaa tagtaataga tcagttgaac tcgaataatt catttttagt
      841 tttcattttt tgacccatta gcttagaatc gaggtgagtt agcgatcttc acattcacga
      901 tgatttattt tatattagta ctcaaatgat caagattacg aattcaaatg agattagttc
      961 tcaaattaga ttagtttcca tatgttgatt cctaaggtga tgcacaattg atttgcattg
     1021 gtgatttggt tgagaatgag ggaagtggaa gctaactgtt catgatggaa caactcatgg
     1081 tgttggggtt gttgtgatta tgaattcatt gaagtcagtt ggatggtaaa caaatgagag
     1141 cacaaacaat agttagcatt attttcaatc aagaggtagc ataatggatg ggtcaacaag
     1201 ttgggttatg taccaaatct ggttatgtgg ttgttaactg ttgtggcagg gtagttaact
     1261 tttgtggttg ttaagtgatt aggaatgtac taaatttggt ctttaactcg gtgaaaaatt
     1321 actgatgttg tatttgtgag cttaatagtt tccggatgtt agtaaatatt gtaaattatg
     1381 gagtataaat atatttatat gtagtgtggt ataattgttg tgacatggcg ggtatgtgaa
     1441 tagggaaatt gaaactgcca aatgttgaga tgaaagtaaa gagatggtat gatgcattgt
     1501 atttataggt attaatctta aatttagcta acattacatt tgtatttcta attcaaaggt
     1561 gtcaaacttt attgcctatt taaattgtcg ttctactcta ttctgatttt ttttgatgta
     1621 tttttactca tagtttgatt agatgtttac atggagattt tcaagctctg tttgattgtg
     1681 tgggacatga gtgtgaatgt taaaattgaa gcttataaag ccctttgtag ggtaggtatg
     1741 gcatccaatt ttattctgat caatctcaaa gaaagtctta ccacacttgg attaaaataa
     1801 actttcatgt caacttacaa gaaagcgttt caatttacat gcatcgagtg ctggtagaac
     1861 ttttatagat gggttggaga atgaaatctt caaggtactc cgaattctct caaaatgtgc
     1921 aataatgata tatagatgga acttagaagt ggtaatctga gtgggtcaca ctatatccat
     1981 atgtatatat gtgcccgtgt acatacaatg catatgtacc tattcagttt tgtgggtaca
     2041 ttgcatatgt ataaacctgg cctgactgaa tttctttttt ataggttccg tacatatatc
     2101 gtaataaaaa ctgaacgctg tcaataatca atttatatat ctcattaaag gcttattctt
     2161 atgttatttc gatatattca tgaattcgta tttctcattt aaggttgatt ctaatgttat
     2221 ttggttatga catattaatg agttatatac atgggttata tccacctgat tattccataa
     2281 aactgttttt agtttgttcg tgataatcaa aagaagctgc acgtttggat gcagagagaa
     2341 ctactgaaat agccatggca aaggcatcaa tggttgatga tgttcagaca aaacccaggg
     2401 gagctcatga aacataatga gatatgtcag gtttaactga ttacattttt ttttcttttt
     2461 gtgatagtgt tttagtatat aacggttcaa aattagttca tgttgaaatg ggtcaaaatt
     2521 agatcatgcc gagacgggtc aaaattagta taggataaaa cgggtcatgg agtagggtga
     2581 ggatatggac tatttcggtt tggatcagag tgttaaaggc tacaattttc gaatttggtt
     2641 tcatcattat tcttttgcaa agcctgctct atatggtcaa ttttttatgc atactgatgg
     2701 gttgacttgt gctgacatat tcacttttta aaagtcaacc ggccaacttt ttgggggctt
     2761 ctcattcttt tttttctttt ggtaatgtgg ctaatggact tggttgatga tataggatgt
     2821 gtaagtattg aaaattttga tggtggtaca aatggcggtt gaaacaggaa aattcaagga
     2881 caaagccaaa cctatcagtt acatatggtt ttcatcagtt cagaaaagaa aatcgcttaa
     2941 agtatggaac aaactggata ttcacctaca atttcgacga acgcgctttc tacctatatt
     3001 gatgtttagg gaaatcttac aaaaatgtta ttgcatttgc tttgttgaat aacaatgttt
     3061 ggtatcaata tctactatga tgttttgttt taaatgttct ttatatagta tcatcactac
     3121 ctaatgtatt aatacataaa gatattagag tcaaccgtgc aacgcacggg ctcttaaagt
     3181 ctagtatata tatataacat aaatttttat tgtt
//
LOCUS       XR_011757060            2867 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X6, ncRNA.
ACCESSION   XR_011757060
VERSION     XR_011757060.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2867
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..2867
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgtcagg ttggacatat gaggtagatg
      841 gctgatggtt ttctttttct caagatgagt cttggagaag atataaccgt cgaatgcagg
      901 agtatgaaga agaaatgcag ggagtgtttc aatgggttgg aacaatggca agacaccaat
      961 tatcagccta acacaggtcc ttgcaagctt cttcatgctt aaaaagataa aatcttatat
     1021 gttacgataa caagttcccg ggatctgcga tatgatgcaa caacggcgac tttaaaatga
     1081 cgcttagtct ttcacaggaa attgaaactg ccaaatgttg agatgaaagt aaagagatgg
     1141 tatgatgcat tgtatttata ggtattaatc ttaaatttag ctaacattac atttgtattt
     1201 ctaattcaaa ggtgtcaaac tttattgcct atttaaattg tcgttctact ctattctgat
     1261 tttttttgat gtatttttac tcatagtttg attagatgtt tacatggaga ttttcaagct
     1321 ctgtttgatt gtgtgggaca tgagtgtgaa tgttaaaatt gaagcttata aagccctttg
     1381 tagggtaggt atggcatcca attttattct gatcaatctc aaagaaagtc ttaccacact
     1441 tggattaaaa taaactttca tgtcaactta caagaaagcg tttcaattta catgcatcga
     1501 gtgctggtag aacttttata gatgggttgg agaatgaaat cttcaaggta ctccgaattc
     1561 tctcaaaatg tgcaataatg atatatagat ggaacttaga agtggtaatc tgagtgggtc
     1621 acactatatc catatgtata tatgtgcccg tgtacataca atgcatatgt acctattcag
     1681 ttttgtgggt acattgcata tgtataaacc tggcctgact gaatttcttt tttataggtt
     1741 ccgtacatat atcgtaataa aaactgaacg ctgtcaataa tcaatttata tatctcatta
     1801 aaggcttatt cttatgttat ttcgatatat tcatgaattc gtatttctca tttaaggttg
     1861 attctaatgt tatttggtta tgacatatta atgagttata tacatgggtt atatccacct
     1921 gattattcca taaaactgtt tttagtttgt tcgtgataat caaaagaagc tgcacgtttg
     1981 gatgcagaga gaactactga aatagccatg gcaaaggcat caatggttga tgatgttcag
     2041 acaaaaccca ggggagctca tgaaacataa tgagatatgt caggtttaac tgattacatt
     2101 tttttttctt tttgtgatag tgttttagta tataacggtt caaaattagt tcatgttgaa
     2161 atgggtcaaa attagatcat gccgagacgg gtcaaaatta gtataggata aaacgggtca
     2221 tggagtaggg tgaggatatg gactatttcg gtttggatca gagtgttaaa ggctacaatt
     2281 ttcgaatttg gtttcatcat tattcttttg caaagcctgc tctatatggt caatttttta
     2341 tgcatactga tgggttgact tgtgctgaca tattcacttt ttaaaagtca accggccaac
     2401 tttttggggg cttctcattc ttttttttct tttggtaatg tggctaatgg acttggttga
     2461 tgatatagga tgtgtaagta ttgaaaattt tgatggtggt acaaatggcg gttgaaacag
     2521 gaaaattcaa ggacaaagcc aaacctatca gttacatatg gttttcatca gttcagaaaa
     2581 gaaaatcgct taaagtatgg aacaaactgg atattcacct acaatttcga cgaacgcgct
     2641 ttctacctat attgatgttt agggaaatct tacaaaaatg ttattgcatt tgctttgttg
     2701 aataacaatg tttggtatca atatctacta tgatgttttg ttttaaatgt tctttatata
     2761 gtatcatcac tacctaatgt attaatacat aaagatatta gagtcaaccg tgcaacgcac
     2821 gggctcttaa agtctagtat atatatataa cataaatttt tattgtt
//
LOCUS       XR_011757061            3248 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X7, ncRNA.
ACCESSION   XR_011757061
VERSION     XR_011757061.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3248
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3248
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..3248
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgtcagg ttggacatat gaggtagatg
      841 gctgatggtt ttctttttct caagatgagt cttggagaag atataaccgt cgaatgcagg
      901 agtatgaaga agaaatgcag ggagtgtttc aatgggttgg aacaatggca agacaccaat
      961 tatcagccta acacaggtcc ttgcaagctt cttcatgctt aaaaagataa aatcttatat
     1021 gttacgataa caagttcccg ggatctgcga tatgatgcaa caacggcgac tttaaaatga
     1081 cgcttagtct ttcacagtaa gtattcattg aaaatacttt cacaactctt ttctcctcat
     1141 atcttcataa gtcaattggt accgatcatt agatatattt tacttaattt gcctctattt
     1201 gattttgttt ttctttgaat agtaatagat cagttgaact cgaataattc atttttagtt
     1261 ttcatttttt gacccattag cttagaatcg aggtgagtta gcgatcttca cattcacgat
     1321 gatttatttt atattagtac tcaaatgatc aagattacga attcaaatga gattagttct
     1381 caaattagat tagtttccat atgttgattc ctaaggtgat gcacaattga tttgcattgg
     1441 tgatttggtt gagaatgagg gaagtggaag ctaactgttc atgatggaac aactcatggt
     1501 gttggggttg ttgtgattat gaattcattg aagtcagttg gatggtaaac aaatgagagc
     1561 acaaacaata gttagcatta ttttcaatca agaggtagca taatggatgg gtcaacaagt
     1621 tgggttatgt accaaatctg gttatgtggt tgttaactgt tgtggcaggg tagttaactt
     1681 ttgtggttgt taagtgatta ggaatgtact aaatttggtc tttaactcgg tgaaaaatta
     1741 ctgatgttgt atttgtgagc ttaatagttt ccggatgtta gtaaatattg taaattatgg
     1801 agtataaata tatttatatg tagtgtggta taattgttgt gacatggcgg gtatgtgaat
     1861 agggaaattg aaactgccaa atgttgagat gaaagtaaag agatggtatg atgcattgta
     1921 tttataggta ttaatcttaa atttagctaa cattacattt gtatttctaa ttcaaaggtg
     1981 tcaaacttta ttgcctattt aaattgtcgt tctactctat tctgattttt tttgatgtat
     2041 ttttactcat agtttgatta gatgtttaca tggagatttt caagctctgt ttgattgtgt
     2101 gggacatgag tgtgaatgtt aaaattgaag cttataaagc cctttgtagg gtaggtatgg
     2161 catccaattt tattctgatc aatctcaaag aaagtcttac cacacttgga ttaaaataaa
     2221 ctttcatgtc aacttacaag aaagcgtttc aatttacatg catcgagtgc tggtagaact
     2281 tttatagatg ggttggagaa tgaaatcttc aaggtactcc gaattctctc aaaatgtgca
     2341 ataatgatat atagatggaa cttagaagtg gtaatctgag tgggtcacac tatatccata
     2401 tgtatatatg tgcccgtgta catacaatgc atatgtacct attcagtttt gtgggtacat
     2461 tgcatatgta taaacctggc ctgactgaat ttctttttta taggttccgt acatatatcg
     2521 taataaaaac tgaacgctgt caataatcaa tttatatatc tcattaaagg cttattctta
     2581 tgttatttcg atatattcat gaattcgtat ttctcattta aggttgattc taatgttatt
     2641 tggttatgac atattaatga gttatataca tgggttatat ccacctgatt attccataaa
     2701 actgttttta gtttgttcgt gataatcaaa agaagctgca cgtttggatg cagagagaac
     2761 tactgaaata gccatggcaa aggcatcaat ggttgatgat gttcagacaa aacccagggg
     2821 agctcatgaa acataatgag atatgtcagg atgtgtaagt attgaaaatt ttgatggtgg
     2881 tacaaatggc ggttgaaaca ggaaaattca aggacaaagc caaacctatc agttacatat
     2941 ggttttcatc agttcagaaa agaaaatcgc ttaaagtatg gaacaaactg gatattcacc
     3001 tacaatttcg acgaacgcgc tttctaccta tattgatgtt tagggaaatc ttacaaaaat
     3061 gttattgcat ttgctttgtt gaataacaat gtttggtatc aatatctact atgatgtttt
     3121 gttttaaatg ttctttatat agtatcatca ctacctaatg tattaataca taaagatatt
     3181 agagtcaacc gtgcaacgca cgggctctta aagtctagta tatatatata acataaattt
     3241 ttattgtt
//
LOCUS       XR_011757062            3508 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X8, ncRNA.
ACCESSION   XR_011757062
VERSION     XR_011757062.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3508
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3508
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..3508
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgtcagg ttggacatat gaggtagatg
      841 gctgatggtt ttctttttct caagatgagt cttggagaag atataaccgt cgaatgcagg
      901 agtatgaaga agaaatgcag ggagtgtttc aatgggttgg aacaatggca agacaccaat
      961 tatcagccta acacaggtcc ttgcaagctt cttcatgctt aaaaagataa aatcttatat
     1021 gttacgataa caagttcccg ggatctgcga tatgatgcaa caacggcgac tttaaaatga
     1081 cgcttagtct ttcacagtaa gtattcattg aaaatacttt cacaactctt ttctcctcat
     1141 atcttcataa gtcaattggt accgatcatt agatatattt tacttaattt gcctctattt
     1201 gattttgttt ttctttgaat agtaatagat cagttgaact cgaataattc atttttagtt
     1261 ttcatttttt gacccattag cttagaatcg aggtgagtta gcgatcttca cattcacgat
     1321 gatttatttt atattagtac tcaaatgatc aagattacga attcaaatga gattagttct
     1381 caaattagat tagtttccat atgttgattc ctaaggtgat gcacaattga tttgcattgg
     1441 tgatttggtt gagaatgagg gaagtggaag ctaactgttc atgatggaac aactcatggt
     1501 gttggggttg ttgtgattat gaattcattg aagtcagttg gatggtaaac aaatgagagc
     1561 acaaacaata gttagcatta ttttcaatca agaggtagca taatggatgg gtcaacaagt
     1621 tgggttatgt accaaatctg gttatgtggt tgttaactgt tgtggcaggg tagttaactt
     1681 ttgtggttgt taagtgatta ggaatgtact aaatttggtc tttaactcgg tgaaaaatta
     1741 ctgatgttgt atttgtgagc ttaatagttt ccggatgtta gtaaatattg taaattatgg
     1801 agtataaata tatttatatg tagtgtggta taattgttgt gacatggcgg gtatgtgaat
     1861 agggaaattg aaactgccaa atgttgagat gaaagtaaag agatggtatg atgcattgta
     1921 tttatagttt gattagatgt ttacatggag attttcaagc tctgtttgat tgtgtgggac
     1981 atgagtgtga atgttaaaat tgaagcttat aaagcccttt gtagggtagg tatggcatcc
     2041 aattttattc tgatcaatct caaagaaagt cttaccacac ttggattaaa ataaactttc
     2101 atgtcaactt acaagaaagc gtttcaattt acatgcatcg agtgctggta gaacttttat
     2161 agatgggttg gagaatgaaa tcttcaaggt actccgaatt ctctcaaaat gtgcaataat
     2221 gatatataga tggaacttag aagtggtaat ctgagtgggt cacactatat ccatatgtat
     2281 atatgtgccc gtgtacatac aatgcatatg tacctattca gttttgtggg tacattgcat
     2341 atgtataaac ctggcctgac tgaatttctt ttttataggt tccgtacata tatcgtaata
     2401 aaaactgaac gctgtcaata atcaatttat atatctcatt aaaggcttat tcttatgtta
     2461 tttcgatata ttcatgaatt cgtatttctc atttaaggtt gattctaatg ttatttggtt
     2521 atgacatatt aatgagttat atacatgggt tatatccacc tgattattcc ataaaactgt
     2581 ttttagtttg ttcgtgataa tcaaaagaag ctgcacgttt ggatgcagag agaactactg
     2641 aaatagccat ggcaaaggca tcaatggttg atgatgttca gacaaaaccc aggggagctc
     2701 atgaaacata atgagatatg tcaggtttaa ctgattacat ttttttttct ttttgtgata
     2761 gtgttttagt atataacggt tcaaaattag ttcatgttga aatgggtcaa aattagatca
     2821 tgccgagacg ggtcaaaatt agtataggat aaaacgggtc atggagtagg gtgaggatat
     2881 ggactatttc ggtttggatc agagtgttaa aggctacaat tttcgaattt ggtttcatca
     2941 ttattctttt gcaaagcctg ctctatatgg tcaatttttt atgcatactg atgggttgac
     3001 ttgtgctgac atattcactt tttaaaagtc aaccggccaa ctttttgggg gcttctcatt
     3061 cttttttttc ttttggtaat gtggctaatg gacttggttg atgatatagg atgtgtaagt
     3121 attgaaaatt ttgatggtgg tacaaatggc ggttgaaaca ggaaaattca aggacaaagc
     3181 caaacctatc agttacatat ggttttcatc agttcagaaa agaaaatcgc ttaaagtatg
     3241 gaacaaactg gatattcacc tacaatttcg acgaacgcgc tttctaccta tattgatgtt
     3301 tagggaaatc ttacaaaaat gttattgcat ttgctttgtt gaataacaat gtttggtatc
     3361 aatatctact atgatgtttt gttttaaatg ttctttatat agtatcatca ctacctaatg
     3421 tattaataca taaagatatt agagtcaacc gtgcaacgca cgggctctta aagtctagta
     3481 tatatatata acataaattt ttattgtt
//
LOCUS       XR_011757063            3193 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X9, ncRNA.
ACCESSION   XR_011757063
VERSION     XR_011757063.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3193
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..3193
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgtcagg ttggacatat gaggtagatg
      841 gctgatggtt ttctttttct caagatgagt cttggagaag atataaccgt cgaatgcagg
      901 agtatgaaga agaaatgcag ggagtgtttc aatgggttgg aacaatggca agacaccaat
      961 tatcagccta acacaggtcc ttgcaagctt cttcatgctt aaaaagataa aatcttatat
     1021 gttacgataa caagttcccg ggatctgcga tatgatgcaa caacggcgac tttaaaatga
     1081 cgcttagtct ttcacagtaa gtattcattg aaaatacttt cacaactctt ttctcctcat
     1141 atcttcataa gtcaattggt accgatcatt agatatattt tacttaattt gcctctattt
     1201 gattttgttt ttctttgaat agtaatagat cagttgaact cgaataattc atttttagtt
     1261 ttcatttttt gacccattag cttagaatcg aggtgagtta gcgatcttca cattcacgat
     1321 gatttatttt atattagtac tcaaatgatc aagattacga attcaaatga gattagttct
     1381 caaattagat tagtttccat atgttgattc ctaaggtgat gcacaattga tttgcattgg
     1441 tgatttggtt gagaatgagg gaagtggaag ctaactgttc atgatggaac aactcatggt
     1501 gttggggttg ttgtgattat gaattcattg aagtcagttg gatggtaaac aaatgagagc
     1561 acaaacaata gttagcatta ttttcaatca agaggtagca taatggatgg gtcaacaagt
     1621 tgggttatgt accaaatctg gttatgtggt tgttaactgt tgtggcaggg tagttaactt
     1681 ttgtggttgt taagtgatta ggaatgtact aaatttggtc tttaactcgg tgaaaaatta
     1741 ctgatgttgt atttgtgagc ttaatagttt ccggatgtta gtaaatattg taaattatgg
     1801 agtataaata tatttatatg tagtgtggta taattgttgt gacatggcgg gtatgtgaat
     1861 agggaaattg aaactgccaa atgttgagat gaaagtaaag agatggtatg atgcattgta
     1921 tttataggta ttaatcttaa atttagctaa cattacattt gtatttctaa ttcaaaggtg
     1981 tcaaacttta ttgcctattt aaattgtcgt tctactctat tctgattttt tttgatgtat
     2041 ttttactcat agtttgatta gatgtttaca tggagatttt caagctctgt ttgattgtgt
     2101 gggacatgag tgtgaatgtt aaaattgaag cttataaagc cctttgtagg gtaggtatgg
     2161 catccaattt tattctgatc aatctcaaag aaagtcttac cacacttgga ttaaaataaa
     2221 ctttcatgtc aacttacaag aaagcgtttc aatttacatg catcgagtgc tggtagaact
     2281 tttatagatg ggttggagaa tgaaatcttc aagagagaac tactgaaata gccatggcaa
     2341 aggcatcaat ggttgatgat gttcagacaa aacccagggg agctcatgaa acataatgag
     2401 atatgtcagg tttaactgat tacatttttt tttctttttg tgatagtgtt ttagtatata
     2461 acggttcaaa attagttcat gttgaaatgg gtcaaaatta gatcatgccg agacgggtca
     2521 aaattagtat aggataaaac gggtcatgga gtagggtgag gatatggact atttcggttt
     2581 ggatcagagt gttaaaggct acaattttcg aatttggttt catcattatt cttttgcaaa
     2641 gcctgctcta tatggtcaat tttttatgca tactgatggg ttgacttgtg ctgacatatt
     2701 cactttttaa aagtcaaccg gccaactttt tgggggcttc tcattctttt ttttcttttg
     2761 gtaatgtggc taatggactt ggttgatgat ataggatgtg taagtattga aaattttgat
     2821 ggtggtacaa atggcggttg aaacaggaaa attcaaggac aaagccaaac ctatcagtta
     2881 catatggttt tcatcagttc agaaaagaaa atcgcttaaa gtatggaaca aactggatat
     2941 tcacctacaa tttcgacgaa cgcgctttct acctatattg atgtttaggg aaatcttaca
     3001 aaaatgttat tgcatttgct ttgttgaata acaatgtttg gtatcaatat ctactatgat
     3061 gttttgtttt aaatgttctt tatatagtat catcactacc taatgtatta atacataaag
     3121 atattagagt caaccgtgca acgcacgggc tcttaaagtc tagtatatat atataacata
     3181 aatttttatt gtt
//
LOCUS       XR_011757064            2742 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X10, ncRNA.
ACCESSION   XR_011757064
VERSION     XR_011757064.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2742
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..2742
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgtcagg ttggacatat gaggtagatg
      841 gctgatggtt ttctttttct caagatgagt cttggagaag atataaccgt cgaatgcagg
      901 agtatgaaga agaaatgcag ggagtgtttc aatgggttgg aacaatggca agacaccaat
      961 tatcagccta acacaggtcc ttgcaagctt cttcatgctt aaaaagataa aatcttatat
     1021 gttacgataa caagttcccg ggatctgcga tatgatgcaa caacggcgac tttaaaatga
     1081 cgcttagtct ttcacaggaa attgaaactg ccaaatgttg agatgaaagt aaagagatgg
     1141 tatgatgcat tgtatttata gtttgattag atgtttacat ggagattttc aagctctgtt
     1201 tgattgtgtg ggacatgagt gtgaatgtta aaattgaagc ttataaagcc ctttgtaggg
     1261 taggtatggc atccaatttt attctgatca atctcaaaga aagtcttacc acacttggat
     1321 taaaataaac tttcatgtca acttacaaga aagcgtttca atttacatgc atcgagtgct
     1381 ggtagaactt ttatagatgg gttggagaat gaaatcttca aggtactccg aattctctca
     1441 aaatgtgcaa taatgatata tagatggaac ttagaagtgg taatctgagt gggtcacact
     1501 atatccatat gtatatatgt gcccgtgtac atacaatgca tatgtaccta ttcagttttg
     1561 tgggtacatt gcatatgtat aaacctggcc tgactgaatt tcttttttat aggttccgta
     1621 catatatcgt aataaaaact gaacgctgtc aataatcaat ttatatatct cattaaaggc
     1681 ttattcttat gttatttcga tatattcatg aattcgtatt tctcatttaa ggttgattct
     1741 aatgttattt ggttatgaca tattaatgag ttatatacat gggttatatc cacctgatta
     1801 ttccataaaa ctgtttttag tttgttcgtg ataatcaaaa gaagctgcac gtttggatgc
     1861 agagagaact actgaaatag ccatggcaaa ggcatcaatg gttgatgatg ttcagacaaa
     1921 acccagggga gctcatgaaa cataatgaga tatgtcaggt ttaactgatt acattttttt
     1981 ttctttttgt gatagtgttt tagtatataa cggttcaaaa ttagttcatg ttgaaatggg
     2041 tcaaaattag atcatgccga gacgggtcaa aattagtata ggataaaacg ggtcatggag
     2101 tagggtgagg atatggacta tttcggtttg gatcagagtg ttaaaggcta caattttcga
     2161 atttggtttc atcattattc ttttgcaaag cctgctctat atggtcaatt ttttatgcat
     2221 actgatgggt tgacttgtgc tgacatattc actttttaaa agtcaaccgg ccaacttttt
     2281 gggggcttct cattcttttt tttcttttgg taatgtggct aatggacttg gttgatgata
     2341 taggatgtgt aagtattgaa aattttgatg gtggtacaaa tggcggttga aacaggaaaa
     2401 ttcaaggaca aagccaaacc tatcagttac atatggtttt catcagttca gaaaagaaaa
     2461 tcgcttaaag tatggaacaa actggatatt cacctacaat ttcgacgaac gcgctttcta
     2521 cctatattga tgtttaggga aatcttacaa aaatgttatt gcatttgctt tgttgaataa
     2581 caatgtttgg tatcaatatc tactatgatg ttttgtttta aatgttcttt atatagtatc
     2641 atcactacct aatgtattaa tacataaaga tattagagtc aaccgtgcaa cgcacgggct
     2701 cttaaagtct agtatatata tataacataa atttttattg tt
//
LOCUS       XR_011757065            2677 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839752), transcript variant X11, ncRNA.
ACCESSION   XR_011757065
VERSION     XR_011757065.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2677
                     /gene="LOC139839752"
                     /note="uncharacterized LOC139839752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839752"
     ncRNA           1..2677
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839752"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /db_xref="GeneID:139839752"
ORIGIN      
        1 aaaactatcc tcctccaatc cctattaggt tttgttgatg attgattcac ctctccatca
       61 cagatccgct tttatgttcg tccgacgaac aaaactaaca acgactcttc ctacaaacac
      121 ctttaaatct gaattcatca taaaattacc tacagataca tatgtttttc actgtttttt
      181 tttttaaacc gattgttaaa tcccaaacag atttcaattt tagggcttct gctaactaaa
      241 tcgcgtgagg ggattaatcc taaaaaacga tttccagacc atcaatccag attcatcatt
      301 cgtattcatc ttgatggtgt taattcgtat tcatcaaatc ctctctggag tcttgctatt
      361 gccctaattg gttcttcatc tctaaagttt ttcaggtatc aaagttgcag gatgacattc
      421 gagcacacga tcgacttagt aaataaaaaa aaaaaaactg cacttttgga tgcagagaga
      481 accaatgaat ggcagaagca tcaatggttg atgatgttca gaacaaaaat caggagctcg
      541 tgaaacggaa tgagatatgt cagacccatg tatctgagta tgccattggt ttgtggttga
      601 gtatgtgatc aagattgaaa tttaagctta tgttttcgat ggtaaagtca acttcaattt
      661 gggccatcat gtttatttac ggaatatgca aagcttttat cgacattgtt acgggaagta
      721 cattccatga tgcatatcac ttgtggaaca aaagcatcaa tggttgatga tgttcaaaac
      781 taaaaccagg cgctcatgaa acatgatgag aaatgtcagg ttggacatat gaggtagatg
      841 gctgatggtt ttctttttct caagatgagt cttggagaag atataaccgt cgaatgcagg
      901 agtatgaaga agaaatgcag ggagtgtttc aatgggttgg aacaatggca agacaccaat
      961 tatcagccta acacaggtcc ttgcaagctt cttcatgctt aaaaagataa aatcttatat
     1021 gttacgataa caagttcccg ggatctgcga tatgatgcaa caacggcgac tttaaaatga
     1081 cgcttagtct ttcacatttg attagatgtt tacatggaga ttttcaagct ctgtttgatt
     1141 gtgtgggaca tgagtgtgaa tgttaaaatt gaagcttata aagccctttg tagggtaggt
     1201 atggcatcca attttattct gatcaatctc aaagaaagtc ttaccacact tggattaaaa
     1261 taaactttca tgtcaactta caagaaagcg tttcaattta catgcatcga gtgctggtag
     1321 aacttttata gatgggttgg agaatgaaat cttcaaggta ctccgaattc tctcaaaatg
     1381 tgcaataatg atatatagat ggaacttaga agtggtaatc tgagtgggtc acactatatc
     1441 catatgtata tatgtgcccg tgtacataca atgcatatgt acctattcag ttttgtgggt
     1501 acattgcata tgtataaacc tggcctgact gaatttcttt tttataggtt ccgtacatat
     1561 atcgtaataa aaactgaacg ctgtcaataa tcaatttata tatctcatta aaggcttatt
     1621 cttatgttat ttcgatatat tcatgaattc gtatttctca tttaaggttg attctaatgt
     1681 tatttggtta tgacatatta atgagttata tacatgggtt atatccacct gattattcca
     1741 taaaactgtt tttagtttgt tcgtgataat caaaagaagc tgcacgtttg gatgcagaga
     1801 gaactactga aatagccatg gcaaaggcat caatggttga tgatgttcag acaaaaccca
     1861 ggggagctca tgaaacataa tgagatatgt caggtttaac tgattacatt tttttttctt
     1921 tttgtgatag tgttttagta tataacggtt caaaattagt tcatgttgaa atgggtcaaa
     1981 attagatcat gccgagacgg gtcaaaatta gtataggata aaacgggtca tggagtaggg
     2041 tgaggatatg gactatttcg gtttggatca gagtgttaaa ggctacaatt ttcgaatttg
     2101 gtttcatcat tattcttttg caaagcctgc tctatatggt caatttttta tgcatactga
     2161 tgggttgact tgtgctgaca tattcacttt ttaaaagtca accggccaac tttttggggg
     2221 cttctcattc ttttttttct tttggtaatg tggctaatgg acttggttga tgatatagga
     2281 tgtgtaagta ttgaaaattt tgatggtggt acaaatggcg gttgaaacag gaaaattcaa
     2341 ggacaaagcc aaacctatca gttacatatg gttttcatca gttcagaaaa gaaaatcgct
     2401 taaagtatgg aacaaactgg atattcacct acaatttcga cgaacgcgct ttctacctat
     2461 attgatgttt agggaaatct tacaaaaatg ttattgcatt tgctttgttg aataacaatg
     2521 tttggtatca atatctacta tgatgttttg ttttaaatgt tctttatata gtatcatcac
     2581 tacctaatgt attaatacat aaagatatta gagtcaaccg tgcaacgcac gggctcttaa
     2641 agtctagtat atatatataa cataaatttt tattgtt
//
LOCUS       XM_071829903            1112 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ENHANCED DISEASE
            RESISTANCE 2-like (LOC139839753), mRNA.
ACCESSION   XM_071829903
VERSION     XM_071829903.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1112
                     /gene="LOC139839753"
                     /note="protein ENHANCED DISEASE RESISTANCE 2-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139839753"
     CDS             131..1009
                     /gene="LOC139839753"
                     /codon_start=1
                     /product="protein ENHANCED DISEASE RESISTANCE 2-like"
                     /protein_id="XP_071686004.1"
                     /db_xref="GeneID:139839753"
                     /translation="MCPTNHKNKPTDWRHETINGGSLKHVNLETGSNGWASPPGDLFS
                     LRSRNYFTKKTKSPSGPYLLQPAGVDWLRSSSKLDHVLSRADNRIINALRKHDAKKTF
                     ILAVNLQVPGRDHHSAVFYFATDEPVQPGSLLYRFINGDDAFRNQRFKIVNRIVKGPW
                     IVKATVGNYSACLLGKALNCYYYNGPNYLEIDVDIGSSKIATAILKLALGCVTAVTID
                     MGFVVEAQEEEDLPERLFGAVRVCQMEMSSATFVDSVNSVSTNVMPSKVVVAGGHGNR
                     VQASDLQDDDDDDDDK"
     misc_feature    233..859
                     /gene="LOC139839753"
                     /note="Protein ENHANCED DISEASE RESISTANCE 2, C-terminal;
                     Region: EDR2_C; pfam07059"
                     /db_xref="CDD:462076"
ORIGIN      
        1 aaacaacata caagtaatga gatatcagtc ggcagatccc acatcttaaa ataactggaa
       61 aaataaacgg aactgaaaag gagagaggtt ctcctaccct cacatccgcc gcaggtgaag
      121 tcctaccaga atgtgtccaa caaatcacaa aaacaaacca acagactggc gtcatgaaac
      181 tatcaacggt ggatcactca aacacgtcaa ccttgaaacc ggatccaacg gttgggcttc
      241 acctcccggc gacctcttct ctctccggag ccgcaactac ttcaccaaga aaaccaaatc
      301 accgtccggt ccctacctcc tccaacccgc cggtgtcgac tggctccggt ccagctcgaa
      361 actcgatcac gtcctctcac gcgccgacaa tcggataatc aacgccctcc gtaaacacga
      421 cgctaaaaaa acttttatac tcgccgttaa tttacaggtt ccaggtagag atcatcatag
      481 cgcggttttt tatttcgcga ctgatgaacc ggttcaacct ggttcgttac tgtaccggtt
      541 tattaacggc gatgatgcgt ttcgtaacca gcggtttaaa attgtgaacc ggattgtgaa
      601 aggaccgtgg attgttaaag caacagttgg taattattca gcttgtttat tagggaaagc
      661 attaaattgt tattattata atggacctaa ttatttagaa attgatgttg atattggtag
      721 ctcgaaaatt gctactgcga ttttgaaatt ggcgttaggt tgtgtaactg ctgtaacaat
      781 tgatatggga tttgtagttg aagctcaaga ggaagaggat ttgcctgaaa ggctgtttgg
      841 tgcagttagg gtttgtcaaa tggaaatgtc atctgctact ttcgttgatt cggttaattc
      901 ggttagtacg aatgtgatgc cgagtaaggt agtggtggct ggtggccatg ggaatcgagt
      961 gcaagcttcc gatttacagg atgatgatga tgatgatgat gataagtgag tgaataactg
     1021 tgatgaaaag ggtaaattgt gttagatttg tatgttattt gaggtgatcg gtttatttgt
     1081 tatctatgtg tactctgttt aagttaaaca ca
//
LOCUS       XM_071829904            4651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pleiotropic drug resistance
            protein 1-like (LOC139839754), mRNA.
ACCESSION   XM_071829904
VERSION     XM_071829904.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4651
                     /gene="LOC139839754"
                     /note="pleiotropic drug resistance protein 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 60 Proteins"
                     /db_xref="GeneID:139839754"
     CDS             187..4488
                     /gene="LOC139839754"
                     /codon_start=1
                     /product="pleiotropic drug resistance protein 1-like"
                     /protein_id="XP_071686005.1"
                     /db_xref="GeneID:139839754"
                     /translation="MDGSDIYKASRSIRLGSLSSRSNGGMGSLRSGSTSVWRNTGMDV
                     FSRSTREEDDEEALKWASLEKLPTFDRLKKGLLFGSSGPSNEVDVDNLSYEDRKRLLD
                     RLVNIADEDNEKFLLKLRNRIDRVGIDLPTIEVQYENLTVEADVNTGSRALPSFINFH
                     IDIFEMFLSLFRLLPNSKKHITILDNVSGIVKPSRMTLLLGPPSSGKTTLLLAMAGKL
                     DKELQSSGKVTYNGHELHEFVPERTSAYISQNDVHIGEMTVRETLAFSARCQGIGSRY
                     EMLAELSRREINANIKPDPDIDVFMKAAASEGQEANVVTDYTLKLLGLDICADTMVGD
                     RMIRGISGGQKKRVTTGEMIVGPSKVLLMDEISTGLDSSTTFQIVKSLKQFTHILEGT
                     AVISLLQPAPETYDLFDDIILLTDGIIVYQGPRDNVLEFFEFMGFKCPERKGVADFLQ
                     EVTSKKDQQQYWMRRNEHYRFVSAREFSDSFKSFHIGKRLENDLRTPFDKSRSHPAAL
                     TTEKYGLSTKELFKACFDREVLLVKRNSFVYYFKLTQLFIMALTTMTVFLRTEMHRNT
                     LEDGGKYNGALYFGVMMIMFNGMSEIPMTIAKLPVFYKQRDFRFYPSWAYALPSWVVK
                     IPVSFLEAGLWTILTYYVIGFDPHFSVFMKHFLILFVSNQVSAALFRFIGSIGRNMIV
                     ANTFGSFSLLIIVALGGFILSRDNVKKWWIWGYWISPMMYVMNGITVNEFLGDRWNKP
                     LNGTSTTLGKSIITTRGLFAEAYWYWIAIASSVGFIFLFNSCFGLSLEFLNPLGQSRS
                     VSSQNDSDKNAVELSSSGSGGDRTKKKGMILPFEPHSITFNDVKYSVDMPHEMRDQGT
                     NEDRLLLLKSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPK
                     KQETFARISGYCEQNDIHSPHVTVYESLMYSAWLRLATDVTENTRKMFVDEVMDLVEL
                     NPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV
                     RNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQELYVGPVGRNSCELIKYFEDID
                     GVSKIKDGYNPATWMLEVSTTAQEIALGVDFTEIYRNSELFRRNKALIAELSVALPGT
                     KDLYFPTQYSRSFLVQCMACLWKQRLSYWRNPSYTAVRFAFTTFIGIMFGTIFWDLGK
                     KRKTQQDLSNAMGSMYAATLFLGVQNASAVQPVVDIERTVFYRERAAGMYSALAYACA
                     QVLVEIPYIFMQTITYCIIVYTMIGFDWTASKFFWYIYFLFCLLLYMTFYGMMTVAIT
                     PNANIAAIVAASFYGFFNLFSGFIVPRPKIPVWWRWYYWCNPLAWTIYGTVASQFGDY
                     DDLLVDGETVKGYLDRFYGFKHSFLGAVAGVHFGLVIGFGLIFAYCIQSFNFQKR"
     misc_feature    244..4485
                     /gene="LOC139839754"
                     /note="ABC transporter G family member; Provisional;
                     Region: PLN03140"
                     /db_xref="CDD:215599"
     polyA_site      4651
                     /gene="LOC139839754"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacctttagt ttctcatggt gagccccttt tcttctaaat gggatcacct tgataaaaaa
       61 aaaaaaaaaa aaaaaaaaca acaacaacac ccttcatgtt cttgattgat tcttgctagt
      121 taacctcatc aacttctttt tttaaacatt ttcttctgag gttgtttgat ttgatttttt
      181 gtaataatgg atgggagtga catatataaa gctagtagaa gtataaggtt agggagttta
      241 agctctagaa gtaatggagg aatggggagt ttaagatcgg gaagtacgtc ggtatggagg
      301 aacactggga tggatgtttt ttcgcgatct acgcgtgaag aagatgatga agaagctctt
      361 aaatgggcgt cacttgaaaa gcttccaact tttgatcgtt taaagaaagg tttattgttt
      421 ggatcatctg ggccgtcgaa tgaagttgat gtagacaatc ttagctatga agatcgaaaa
      481 cgattacttg atagactcgt aaatattgct gatgaagata atgaaaagtt tttgttgaag
      541 cttagaaaca gaatagacag ggttgggatt gatttgccaa caattgaagt tcaatatgag
      601 aatttgacag tggaggctga tgtcaacact ggaagcagag ctttacctag tttcattaac
      661 ttccatattg atatatttga gatgttcttg agcttattcc gtctgcttcc gaattcaaaa
      721 aagcatataa ccatccttga caatgttagc gggatcgtta aacctagcag gatgacatta
      781 cttttgggcc caccaagttc agggaaaacg acactgttgt tagccatggc tgggaagctc
      841 gataaagaac ttcagagctc gggtaaggtg acatataacg gacatgaatt acatgagttt
      901 gtacccgaaa gaacttctgc ttatataagt caaaacgatg ttcatattgg agaaatgact
      961 gttagagaaa cattggcttt ttctgcaaga tgccaaggga ttggatcgcg ttacgagatg
     1021 ttggcagagt tgtcaagaag agagataaat gcaaacataa aacctgatcc cgatatcgat
     1081 gtcttcatga aggctgcagc atcagaaggt caagaagcaa atgtggtgac cgattacact
     1141 ctaaagttgt tggggttaga catttgtgca gataccatgg taggggatcg aatgataagg
     1201 gggatttcgg gtgggcaaaa gaagcgagtt acgactggtg aaatgatagt tggaccgtca
     1261 aaggttctac ttatggacga gatatctacc ggtttagata gttctacaac tttccaaatc
     1321 gtgaaatcgc ttaaacaatt tacgcatatt ctcgaaggaa ccgcagttat ttctctcctt
     1381 cagccagcac ccgagacgta tgacttattt gatgacatca ttcttctaac cgacggaata
     1441 atagtgtatc aaggaccacg tgataatgtg ctcgagtttt ttgaatttat ggggttcaaa
     1501 tgtcccgaga ggaaaggtgt tgccgatttc ttgcaagaag tgacatcaaa gaaagatcaa
     1561 caacaatatt ggatgagaag aaatgagcat tacagattcg tttcggctcg ggaattttca
     1621 gattctttta agtcgttcca tataggaaag agactcgaga atgatcttcg aaccccgttt
     1681 gacaaaagcc gaagccaccc ggctgctctt acaaccgaga agtacggttt aagtacaaaa
     1741 gagcttttca aagcttgttt tgatagagag gtcttgcttg ttaagagaaa ttcatttgtt
     1801 tactacttca aattgaccca actgtttatc atggcattaa cgactatgac cgtgttttta
     1861 cgaaccgaga tgcatagaaa tactttagag gatggaggga aatataatgg tgctctttat
     1921 ttcggtgtga tgatgatcat gtttaacggg atgtctgaaa ttccaatgac aattgcaaag
     1981 cttcctgtat tttacaagca acgggacttt cggttttatc cctcgtgggc ctacgctctt
     2041 ccgtcatggg tagtcaagat tcccgtttcg tttcttgaag caggcctatg gacaattctc
     2101 acatactacg tcataggatt tgatccccat ttctcagtat ttatgaagca tttccttata
     2161 ctctttgtta gtaaccaagt gtctgctgca ttgtttcgtt tcattgggtc aattggtcgt
     2221 aacatgattg ttgcaaatac gtttggttca ttttcgcttc tcataatcgt tgcattgggt
     2281 ggctttatcc tttcacgaga taatgtgaaa aagtggtgga tatggggcta ctggatatcc
     2341 ccaatgatgt acgtcatgaa cggtatcacg gttaatgaat ttctcgggga cagatggaat
     2401 aagcctttaa atggtacgag tacgacacta gggaaatcta tcatcaccac tcgaggattg
     2461 ttcgcagaag cttactggta ttggattgcg attgcgtcct ccgttggatt tatatttctc
     2521 ttcaattcgt gtttcggttt gtctcttgag tttctcaatc cgttggggca atctcgatct
     2581 gtatcatcac aaaacgacag tgacaaaaat gctgttgagc tatcttctag tgggagcgga
     2641 ggcgatcgaa ccaagaagaa aggaatgatt cttccatttg aaccccattc aattaccttc
     2701 aatgatgtca aatactccgt cgacatgcct catgaaatga gagatcaagg aacaaatgaa
     2761 gatagattgc tgttactcaa gagtgtgagt ggagctttta ggcccggtgt tttgactgcc
     2821 ttaatgggag ttagtggtgc gggaaaaact actttaatgg atgtattagc gggtagaaag
     2881 acgggtgggt atatcgaggg cgacatcagg atctcgggtt acccaaaaaa gcaagaaact
     2941 tttgctcgga tctcaggata ttgcgagcaa aatgatatcc attcgcctca tgttacggtt
     3001 tatgaatctt tgatgtactc agcttggcta aggttggcaa cagatgttac cgaaaacacc
     3061 agaaagatgt ttgttgatga ggtgatggac ctagtggaat tgaacccgtt gagagacgca
     3121 ttagttgggt tgccaggtgt taatgggctg tcaacagaac agagaaaaag gttaaccatc
     3181 gcagttgagc ttgtggctaa cccgtctatc atatttatgg acgagccgac atctgggtta
     3241 gatgcacgag cggctgcaat tgtgatgagg acggttagga acactgttga cacaggaaga
     3301 acagttgtat gcaccattca tcaacctagc attgatatat ttgaagcttt cgatgaatta
     3361 tttttgatga aaagaggagg acaagaatta tatgtagggc ccgtcggtag gaattcgtgt
     3421 gagctgataa aatacttcga ggatatcgat ggggttagta agattaaaga cggatataac
     3481 cctgcgacgt ggatgttgga agtcagtaca accgctcaag aaattgctct aggcgtcgat
     3541 ttcactgaaa tctacagaaa ctcggaacta ttcaggagaa ataaggcact tattgctgaa
     3601 ctaagcgtcg cacttcccgg taccaaagac ctttatttcc cgacacaata ctcacggtct
     3661 tttttagtcc aatgtatggc ttgcttatgg aaacaacgtc tgtcctactg gcgaaaccct
     3721 tcttacacgg ctgttcgttt tgctttcacc acttttatcg ggatcatgtt tggtactata
     3781 ttctgggatc ttggtaaaaa aaggaaaacc caacaagatc tatctaacgc aatgggttct
     3841 atgtatgcgg caactttgtt ccttggagtt caaaacgcat cggcggtgca gccagttgta
     3901 gacatcgaac gcaccgtgtt ttaccgagaa cgagccgcag gaatgtattc cgctttagca
     3961 tatgcctgtg ctcaggttct ggtggagata ccgtacatat ttatgcaaac aataacttac
     4021 tgtatcattg tttacactat gatcggattc gattggaccg cttccaaatt cttttggtac
     4081 atttatttcc tgttctgctt gttactctac atgacttttt acggcatgat gactgtcgcc
     4141 atcaccccga acgccaacat tgctgccatc gttgcagctt ctttttacgg cttctttaat
     4201 ttgttctccg gcttcatcgt cccacgacca aaaattccgg tgtggtggag gtggtactat
     4261 tggtgtaacc cgttggcatg gaccatctac ggcacggtgg catcacagtt tggtgactat
     4321 gatgatttgc ttgtggacgg tgaaaccgtg aaggggtacc tggatcgatt ttatgggttc
     4381 aaacatagtt ttcttggtgc tgttgcgggt gtgcatttcg gattagttat tggattcggg
     4441 cttatatttg catattgcat tcaatccttc aatttccaga agagataaat aggtcgctta
     4501 agttaacatg tttaaaaata atcattttgt attagaaaaa tttacttgga tagtccctgt
     4561 gttttacatc atatttctca cccatttata tttaaaaacg ttacatgggt ggtccctttg
     4621 atttacaaag attatagtta tatttattat a
//
LOCUS       XM_071829905            1847 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent protein
            kinase 7-like (LOC139839755), mRNA.
ACCESSION   XM_071829905
VERSION     XM_071829905.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1847
                     /gene="LOC139839755"
                     /note="calcium-dependent protein kinase 7-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 81 Proteins"
                     /db_xref="GeneID:139839755"
     CDS             102..1682
                     /gene="LOC139839755"
                     /codon_start=1
                     /product="calcium-dependent protein kinase 7-like"
                     /protein_id="XP_071686006.1"
                     /db_xref="GeneID:139839755"
                     /translation="MGNCCVTSGKSAKKKEKKHDKPNPFSNAYSPRRVTGSELKLYVL
                     TNPTGHDIKQRYNLGRELGRGEFGVTYLCTDLETGERFACKSILKKKLKNSVDIDDMR
                     REIEIMKHLPKHPNIVTLKDTYEDNDAVHIVMELCEGGELFDRIVARGHYTERAAAAI
                     MRTIVEVVQVCHMNGVMHRDLKPENFLFANKKETSPLKTIDFGLSVFFKPGKVFNEVV
                     GSPWYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAILRSEINFD
                     RDPWSKVSEKAKDLVKKMLNPDPNLRLTAQQVLEHPWLFDAKAAPNVSLGEVVRSRLK
                     QFSVMNKLKKRALRVIAEYISVDEVAGIKEIFEMMDTGNKGKITVEELRSGFQKLGQL
                     MNDADFKVLTETVDNDGDGTINFDQFLAVSVHLRRLVNDEHLHKAFAFFDKNLTGYIE
                     VEELRHVLSDEENINGIDDVINGIMHDVDTDKDGRISYDEFAAMMNAGTDWRKASRQY
                     SREHFNSLSLELKRDGSL"
     misc_feature    264..1040
                     /gene="LOC139839755"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; Region: STKc_CAMK; cd05117"
                     /db_xref="CDD:270687"
     misc_feature    order(285..299,309..311,348..350,354..356,453..455,
                     501..512,522..524,528..530,636..641,645..647,651..656,
                     660..662,699..704,711..713,753..767,771..773)
                     /gene="LOC139839755"
                     /note="active site"
                     /db_xref="CDD:270687"
     misc_feature    order(285..296,309..311,348..350,354..356,453..455,
                     501..512,522..524,651..656,660..662,699..704)
                     /gene="LOC139839755"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(297..299,522..524,528..530,636..641,645..647,
                     651..653,711..713,753..767,771..773)
                     /gene="LOC139839755"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(699..725,753..767)
                     /gene="LOC139839755"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270687"
     misc_feature    1149..1592
                     /gene="LOC139839755"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
ORIGIN      
        1 cccttttctt ttatacattt gactttgaat tccccctagt aacatacagt atttcaataa
       61 acacttccta aaccccaagt agacaaattg gcataacagt aatgggaaat tgctgtgtca
      121 cctctggtaa atctgctaag aaaaaggaga agaaacacga caaaccgaac ccgttctcaa
      181 atgcctatag tcccagaagg gtaactggaa gtgagttgaa actttacgta ttaacgaacc
      241 caacgggtca tgatatcaaa cagagatata atctaggacg ggagctagga aggggtgaat
      301 tcggggtaac atatttatgt acagatttgg aaactggtga aagattcgcc tgtaaatcaa
      361 tattgaagaa aaaacttaag aattcagttg atattgatga tatgaggagg gaaattgaaa
      421 tcatgaagca tttgcccaaa catccgaata tcgtgacgtt gaaggataca tatgaagata
      481 atgatgcagt gcatatagtg atggaattgt gtgagggtgg tgagttattt gatcgaattg
      541 tggctcgagg acattataca gaacgtgctg cagctgctat tatgcggacg atagtggaag
      601 tcgttcaggt atgccacatg aatggagtta tgcaccgtga tcttaaacct gagaattttc
      661 ttttcgcaaa taaaaaagaa acctctcctt taaagaccat tgattttggg ctgtcagttt
      721 tctttaaacc aggtaaagta ttcaacgagg tagttggtag tccttggtat atggccccag
      781 aagtcctaaa acgcaattat gggcccgagg ttgatgtatg gagtgctgga gttatcttgt
      841 acattttgct ttgtggtgtt ccgccttttt gggcagaaac ggaacaagga gtagctcaag
      901 caattcttcg ttcagaaatt aattttgata gagatccctg gtccaaagtt tcagaaaaag
      961 ccaaggatct agtgaagaaa atgctgaatc ccgatccgaa ccttagactt acagctcaac
     1021 aagttcttga gcacccatgg ttatttgacg caaaggcggc tccaaatgtc tcattgggtg
     1081 aggttgttag gtcaagactt aaacagtttt cagtgatgaa caagctcaag aagcgagctt
     1141 tgagagtgat agctgaatat atatcggttg atgaagtagc tggaataaag gagatatttg
     1201 agatgatgga tacgggtaat aaaggaaaga taactgttga agaacttcga agtggttttc
     1261 aaaaactcgg acaacttatg aatgatgcag attttaaagt attaacggaa accgttgata
     1321 atgatggaga tggtaccata aactttgacc agttcttggc tgttagtgtg catcttagga
     1381 gactggtgaa tgatgagcat ctacacaaag catttgcttt ctttgataaa aacttaactg
     1441 gttatataga agttgaagag ctacgtcacg tgttaagtga tgaagagaat atcaacggga
     1501 ttgatgatgt catcaatggg attatgcatg atgttgacac cgataaggat gggcgcataa
     1561 gttacgacga gtttgctgct atgatgaacg ctggtacaga ttggaggaaa gcgtctaggc
     1621 aatattcacg agagcatttt aacagtctta gtttggaatt aaaaagagat ggatcgttat
     1681 aattagcaag tgaaaaaaca cgaataaatg attaaatgat actgtaatta catgaaagca
     1741 aacttgtata gtgatttgtc atttcatttt ctatgtaaat catgaaagag gcattttttg
     1801 gttatcttcg atagtttact ttaggataca ggactaattc aagtaaa
//
LOCUS       XM_071829906             812 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calmodulin-7 (LOC139839756),
            mRNA.
ACCESSION   XM_071829906
VERSION     XM_071829906.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..812
                     /gene="LOC139839756"
                     /note="calmodulin-7; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 71 Proteins"
                     /db_xref="GeneID:139839756"
     CDS             86..535
                     /gene="LOC139839756"
                     /codon_start=1
                     /product="calmodulin-7"
                     /protein_id="XP_071686007.1"
                     /db_xref="GeneID:139839756"
                     /translation="MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP
                     TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFIS
                     AAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK"
     misc_feature    86..532
                     /gene="LOC139839756"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
     polyA_site      812
                     /gene="LOC139839756"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catatttcca attccaattt ataaaaactt tttttctttt ttttcgtttt ctttttgcat
       61 atttatttaa atcatcaaca aaacaatggc cgatcaactt accgatgatc agatctctga
      121 attcaaagaa gctttcagcc tattcgataa ggatggggat ggttgtatca caaccaagga
      181 acttggaaca gttatgaggt ctcttggaca aaaccctaca gaggctgaac ttcaagatat
      241 gattaatgag gttgatgctg atggcaacgg gactattgat tttcctgaat ttctgaacct
      301 gatggcccgc aaaatgaaag atactgattc tgaagaggaa cttaaggagg cttttagggt
      361 ttttgacaag gaccaaaatg gtttcatttc agcagccgag cttcgccatg tgatgactaa
      421 tcttggtgag aagcttactg atgaggaagt tgacgagatg attcgtgaag ctgatgtgga
      481 cggtgacggc cagatcaact acgaggaatt tgtcaaggtc atgatggcca agtgatgatc
      541 cttaaattgg aatatgaact taaaaaagag caagaaaatg aaggatatgc tctgttttgt
      601 ggttttttat tcactaggga tctttagtgc tgtttgggtg cttttggttt ctcttgtttg
      661 cttttatttg tagtgccgga atattatgta ctggtttttc tgtattttgt ttagtagctt
      721 gaggtagttt cttgttttct tattggttat aaaacctaga acaatttcga gtattttggt
      781 tatctttata tcaattgaat tgtttgccat ta
//
LOCUS       XM_071829907            3436 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839757), mRNA.
ACCESSION   XM_071829907
VERSION     XM_071829907.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3436
                     /gene="LOC139839757"
                     /note="uncharacterized LOC139839757; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839757"
     CDS             166..3231
                     /gene="LOC139839757"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686008.1"
                     /db_xref="GeneID:139839757"
                     /translation="MDESYDCKCIRNICILAHVDHGKTTLADHLIASSGGGVLHPKQA
                     GRLRFMDYLDEEQRRAITMKSSSIALEYKGHSINLIDSPGHMDFCSEVSTASRLSDGG
                     LVLVDAVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLIVELKMSPMEAYNRLQRIVH
                     EVNGIVSAYKSEKYLSDVDSILAGPTGELGDENQEFIEDDEEDTFQPQKGNVVFVCAL
                     DGWGFGISEFAEFYASRLGASSTTLQKALWGPRYFISKTKMIVGKKGLAAGSKARPMF
                     VQFVLDPLWQVYNAVLDTNGDKGILEKLVKSFNLSVPARELQNRDPKAVLQSIMSRWL
                     PLSDAILSMVVKHMPDPITAQSFRVSRLLPKRELIDNDCGNPDVLAEAELVRKSVEAC
                     DSNPESPCVAFVSKMFAVPIKMLPQRDVNGDILNNYAEESGSGDSEECFLAFARIFSG
                     VLHAGQKVFVLSALYDPLKTGDSMQKHIQETELNSLYLMMGQGLKPVATARAGNIVAI
                     RGLGQHILKSATLSSTKNCWPFSSMTFQVSPTLKVAIEPSDPVDMAALMKGLRLLNRA
                     DPFVEVSVSARGEHVLAAAGEVHLERCIKDLKDRFAKVNLEVSPPLVSFRETIEGETL
                     NPFEKLKTLTGNSNFIERTTPNGRCIVRVRVLKLPDALTKLLDECSDLLENIIAGKAI
                     IKSSSGGQDDVHPVESLRKRIWDAIESEVADINNADKDKEKYKLMWKNLLKRIWALGP
                     RQVGPNMLLLPDITTKDSDSSSVFITSSPYVSERLGFSDEMKNDDLVTSGETRSLNEE
                     AESLRSSVLSGFQVATASGPLCDEPMWGLAFVVEASILPFVSESEAIHQQAQTDQYGV
                     FSGQVMTAVKEACKAAVLQKNPRIVEGMYFCELNTPTEYLGPMYAVLARRRARILKEE
                     MQEGSPLFTVHAYVPVAESFGFADELRRWTSGASSALLVLSHWEALDEDPFFVPKTEE
                     EKEEFGDGSSVLQNTARKLIDGVRRRKGLPVEEKVVQHATKQRTLARKV"
     misc_feature    193..3177
                     /gene="LOC139839757"
                     /note="elongation factor G-like protein; Region: PRK13351;
                     cl46912"
                     /db_xref="CDD:481252"
ORIGIN      
        1 caagcaatct tcacctgtta tctcatcaaa tcaggtaaca aatcggaacc ttgcataacc
       61 ctaattacat tgcagttctg ttattccttt tgtagatatc aaatactgct gttgtcaatt
      121 cattattaca ttacatacat aatatataga tttatatcaa tatcaatgga tgaatcgtat
      181 gattgtaagt gcatacgaaa catatgtata ttagcacatg ttgatcatgg caaaacaaca
      241 cttgctgatc acctaattgc atcatctggc ggtggtgttt tacatccaaa acaagctggt
      301 agacttaggt ttatggatta cttagatgaa gaacaacgac gagcgataac tatgaaaagt
      361 tcgtctattg ctttagaata taaaggtcat tcgattaacc taatcgattc accggggcat
      421 atggattttt gtagtgaggt ttcaactgct tcacggttaa gtgatggtgg tttggtttta
      481 gtggatgctg ttgaaggtgt tcatatacaa acacatgcgg ttttgcgtca ggcgtggatt
      541 gaaaagctta caccttgttt agttttgaat aagattgata ggctgattgt tgaattgaag
      601 atgagtccta tggaggcgta caataggtta cagaggattg ttcatgaggt taatgggatt
      661 gttagcgcgt ataagtcaga aaagtattta tcagatgttg attcgatact tgctgggccg
      721 actggtgaat tgggtgatga gaatcaggag tttatagagg atgatgaaga agatacgttt
      781 caaccacaaa agggaaacgt tgtgtttgtt tgtgcgttgg atgggtgggg gtttggtatt
      841 agtgaattcg ccgagtttta tgcttctaga cttggggcta gttccactac tttgcagaag
      901 gcgttgtggg gccctcgata ctttatttca aaaacgaaaa tgattgtggg taagaaggga
      961 ttggctgctg gaagtaaggc tcgacctatg ttcgtgcagt ttgtcctcga cccactatgg
     1021 caggtataca atgcagtttt ggatacaaat ggagataaag gaatccttga aaaattggtt
     1081 aagtcattta atttgtctgt acctgctcgt gaactacaaa atagggatcc aaaagctgtt
     1141 ctacaatcta taatgagcag gtggcttcct ttatcagatg ctatattgtc tatggtggtt
     1201 aagcatatgc cagaccctat tactgcacag tcgtttcggg tgtcacgttt gctccctaaa
     1261 agagaactaa tagataatga ttgtggtaac cctgatgtgc ttgctgaggc tgagctcgta
     1321 cggaaatctg tcgaggcttg tgattcaaat cctgaatcac catgtgtggc ttttgtatct
     1381 aaaatgtttg cagttcctat aaaaatgcta cctcaaagag atgtaaatgg cgatattttg
     1441 aacaactatg cagaagaaag cggaagtgga gatagcgaag agtgttttct tgcatttgcg
     1501 aggattttta gtggggttct tcatgcgggt cagaaggttt ttgtgctttc agctttgtat
     1561 gatcccctta aaacgggaga ttcaatgcag aagcatattc aagaaactga attgaattct
     1621 ttgtatctga tgatgggcca aggattaaaa ccagttgcta ctgctcgggc tggaaatatt
     1681 gttgccatta gagggttggg tcaacatata cttaaaagtg caactctttc atcgacaaaa
     1741 aactgctggc cattttcaag tatgactttc caggtgtcac caactctaaa agtggctata
     1801 gaaccgtctg atccagttga catggctgca cttatgaaag ggcttaggct tttgaaccgg
     1861 gccgacccgt ttgtagaggt tagtgtttct gctagagggg aacacgtgtt agctgctgca
     1921 ggtgaagttc atttggaaag atgtattaaa gacttgaaag ataggtttgc aaaggtaaat
     1981 ctggaagttt caccacctct tgtttcattt agagaaacca ttgaagggga aacgttaaat
     2041 ccttttgaaa agttgaaaac tttaactgga aattctaact ttattgaaag aacaacacca
     2101 aatggtaggt gtatcgttcg tgtacgcgtt ttgaaacttc ctgacgcact tactaagtta
     2161 ctagatgaat gttctgatct tcttgaaaat atcatagctg gtaaagccat tattaaatct
     2221 agctcaggtg gtcaagacga tgtacatcca gttgaatcgc taagaaagcg catatgggat
     2281 gccatagaaa gtgaagttgc agacattaat aatgcagata aagataagga aaaatataaa
     2341 cttatgtgga aaaatctttt aaagagaatt tgggcattgg ggcccagaca agttggtccg
     2401 aacatgcttc ttcttccaga tataactaca aaagactcag attcttcttc tgtttttata
     2461 acaagttccc cgtatgtttc tgaaagattg ggtttttcag atgagatgaa aaatgatgac
     2521 ttggtaacaa gtggtgaaac ccgatcgttg aatgaagaag ctgagagtct caggagcagt
     2581 gtattatcag ggttccaagt agccactgca tctggcccgt tatgtgatga acccatgtgg
     2641 ggtctagctt ttgttgttga agcttctatt ttaccctttg ttagtgagtc agaagctatt
     2701 catcagcaag cacaaactga tcaatacggg gtgttttcag ggcaggttat gacagctgtt
     2761 aaagaagcat gtaaagcagc tgtacttcaa aagaacccta gaatagttga aggaatgtat
     2821 ttttgtgaac tgaatacacc aacagagtat ttaggtccta tgtacgctgt gttggcccgt
     2881 agacgtgcga gaatcttgaa ggaagaaatg caggaagggt caccattgtt tacggtacat
     2941 gcttatgtgc cagttgctga aagttttggt tttgctgatg aattaagaag atggacttct
     3001 ggggcttcga gtgctcttct tgttcttagt cactgggaag cacttgatga agatccgttt
     3061 tttgtaccga aaactgaaga agaaaaagaa gaatttggag atggttcgag tgttttacag
     3121 aatacagcaa ggaaactgat tgatggagtt agaagacgta agggtctccc agttgaggaa
     3181 aaagtggtgc aacatgctac aaaacagagg acgctggctc gcaaggttta atatttcttt
     3241 ggttcagttt tgcattagca cataaataga cggtggctac tgtgcatgat tttcaatttt
     3301 tgttggagtt tccattttac cagttatctt actgtgcatg aaatatatag aaggattcgg
     3361 gtctgttctg gatttgtcta taccttgttt ttactgtttc gtctgaaaat catgttttta
     3421 ctgttatcat cttaaa
//
LOCUS       XM_071829908            3045 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heat shock 70 kDa protein
            15-like (LOC139839758), mRNA.
ACCESSION   XM_071829908
VERSION     XM_071829908.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3045
                     /gene="LOC139839758"
                     /note="heat shock 70 kDa protein 15-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139839758"
     CDS             185..2701
                     /gene="LOC139839758"
                     /codon_start=1
                     /product="heat shock 70 kDa protein 15-like"
                     /protein_id="XP_071686009.1"
                     /db_xref="GeneID:139839758"
                     /translation="MSVVGFDLGNESCVVAVARQRGIDVVLNDESKRETPALVCFGEK
                     QRFLGTAGAATSMMNPKNTISQIKRLIGRSFSDPELQQDIKAFPFTVTEGPDGFPLIN
                     AQYLGEKRLFTPTQVMGMVFSNMKTIAEKNLNAAVVDCCIGIPIYFTDLQRRAVMDAA
                     TIAGLHPLRLMHETTATALAYGIYKTDLPENEQLNVAFVDIGHASMQVCIAGFKKGQL
                     KVLAHSFDRCLGGRDFDEVLFQHFAEKFKAEYKIDVLQNARASLRLRAACEKLKKVLS
                     ANPEAPMNIECLMDDKDVRGFIKRDEFEQISAPILERVKKPLEKALSEAQLTIDNIYA
                     VEVVGSGSRVPAVIKILTEFFGKEPRRTMNASECVSKGCALECAILSPTFKVRDFQVQ
                     ESFPFPIAMTWKGTAQDSQNGNVENVQSSIVFPKGNVIPNVKALTFYRSGTFTVDLQY
                     ADVSELQAPAKISTYTIGPFQATKGDRAKVKVKARLNLHGIVSVESAQLIEEEEVEVP
                     VSKETTKMETDKVPADVPSTNETDVNMQDASAAENGASETGDNPVQMETDAKVEAPKK
                     KVKKSNIPVSEVVYGAMLPADVQKALEKEFEMALQDRVMEETKDKKNAVESYVYDMRN
                     KLNDRLYAFVTDPDREALVAKLQETEDWLYEDGEDETKGVYVSKLDELKKQGDPIEQR
                     YREHSERGDFVSQLANQINAYRQAAASGDPKYEHIDMNEKQKVLNECSDAENWLREKT
                     QLQDSLPKHADPVLLLSDIRKKAEAIDRVCRPIMTKPKPAPPKPATPEPQASPAPAQV
                     DEQPQTSAENPTSPNPNEENIHNSEEPEAMETEKPEEASA"
     misc_feature    185..1351
                     /gene="LOC139839758"
                     /note="nucleotide-binding domain (NBD) of Arabidopsis
                     thaliana heat shock 70 kDa protein 14-16 and similar
                     proteins; Region: ASKHA_NBD_HSP70_AtHsp70-14-like;
                     cd24095"
                     /db_xref="CDD:466945"
     polyA_site      3045
                     /gene="LOC139839758"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taacaataaa acccctctct ttctacatct attgtttacc agtcctctgc acgcctttac
       61 caaagtttcg gaagtcacca taaaacctct tatttctctc aaccgccgcc tctgtactcc
      121 gttaccgtcg ttatcaggta ggaattacct cgttgagtaa acacgacaca ttatctaaga
      181 aaagatgagt gtggtcggat ttgatcttgg aaacgagagt tgtgtcgtgg cagttgccag
      241 acaaagggga atagatgtcg ttcttaatga tgaatcgaag cgtgagacac ctgctcttgt
      301 ttgtttcggc gagaaacagc ggttccttgg aacggctggt gctgcaacca gtatgatgaa
      361 cccaaagaac actatctcac aaattaagcg gttgataggc cggtcctttt ctgatcctga
      421 gttgcaacag gatattaagg catttccttt tactgttacc gagggacctg atggttttcc
      481 tttaattaat gcacaatatc ttggtgaaaa aaggctgttc acaccgactc aggttatggg
      541 gatggttttt tcaaacatga aaacgatagc agagaagaat ttgaatgcag ctgtcgtgga
      601 ttgttgcatt gggataccta tttatttcac cgatcttcaa aggcgggctg ttatggatgc
      661 tgctactatt gctgggttgc atcctttgcg tttgatgcat gaaacaactg caactgcgtt
      721 ggcctatgga atatacaaga ctgatttgcc agaaaacgag cagctcaatg tagcttttgt
      781 tgatattggg catgctagca tgcaagtgtg tatagcaggc tttaagaaag ggcaattgaa
      841 ggttttggct cattcttttg atcgctgttt aggaggaagg gattttgatg aggttttgtt
      901 tcagcatttt gctgagaagt tcaaggcaga gtataaaatt gatgtgcttc agaacgctag
      961 ggctagcctc aggcttcgtg ctgcatgtga aaagctgaag aaggtactca gtgcaaatcc
     1021 agaggcacct atgaacattg aatgcttgat ggatgataag gatgttagag gtttcatcaa
     1081 gagagatgag tttgaacaaa ttagtgcccc gatattggaa cgtgtaaaga aacctttgga
     1141 gaaggcttta tctgaagctc aacttacgat tgataatatt tatgctgttg aggttgttgg
     1201 ttcaggttct agggtgcctg ctgttatcaa gattctgact gaatttttcg ggaaagagcc
     1261 gaggcgtaca atgaacgcta gtgaatgtgt ctcaaaaggc tgtgctttgg aatgtgctat
     1321 tcttagtccc acctttaaag ttagagactt tcaggtgcaa gagagtttcc cattcccaat
     1381 tgctatgaca tggaagggta cagcccaaga ttctcagaat ggaaatgtgg agaatgtgca
     1441 aagcagtatt gtttttccca aaggaaatgt aattcctaat gtgaaagctc ttacttttta
     1501 cagatctggc acatttacag tagatctgca atatgcggat gtaagtgaat tgcaggcacc
     1561 agcaaagatt agtacctaca cgattggtcc atttcaagca acaaaaggtg accgtgctaa
     1621 ggtcaaggtg aaagctcgtt tgaatttgca tggaattgtc tcggtggaat ctgcccagct
     1681 tatcgaagaa gaggaagttg aagttccagt gtctaaagaa acaacaaaga tggagacgga
     1741 taaggttcca gctgatgtac cttcaacaaa tgaaactgat gtaaacatgc aggatgcatc
     1801 cgcggctgag aatggtgctt cagaaacagg agataatcct gttcagatgg agactgatgc
     1861 caaggtggaa gctccaaaga agaaggtcaa gaaatccaac atacctgtct cagaggttgt
     1921 ttatggggcc atgctacctg cggatgtgca gaaagcactg gaaaaggagt ttgaaatggc
     1981 gttgcaggac cgtgttatgg aagaaaccaa ggacaaaaag aatgctgtgg aatcttatgt
     2041 ctatgacatg aggaataagc tgaatgatag attgtatgca tttgttactg atccggatag
     2101 agaagcactc gttgctaagc ttcaagaaac agaagattgg ttgtatgaag atggtgagga
     2161 tgaaaccaaa ggtgtatatg tctccaagct tgatgagctc aaaaagcaag gtgatcccat
     2221 agaacagagg tacagggaac actctgaaag aggagacttt gttagccagt tggcaaatca
     2281 aattaatgct tacaggcagg ctgcagcatc tggtgatccc aaatatgaac acattgacat
     2341 gaatgagaag cagaaggtcc tgaacgagtg ctcagatgca gaaaactggc tgagagagaa
     2401 aacccaactc caggactcac ttcctaagca tgctgaccca gttcttttgt tgtctgatat
     2461 aagaaagaaa gcagaggcaa ttgacagggt ctgtaggcca ataatgacga aaccgaagcc
     2521 ggcaccacca aagccagcta ctcctgagcc acaagcctcg cctgcacctg cccaggtaga
     2581 tgagcagccg cagacttcag cagagaatcc cacgagccca aaccctaatg aagaaaacat
     2641 tcacaattct gaagagccag aagctatgga aactgagaag cctgaggagg cctctgcata
     2701 aaggccagtg ggtctttaat tttgttctgc tattctgttg atggtgtgtg tctctatgga
     2761 cgatagggta cttgtttttt attttgtgta atggtgaata tagattttgg tggatattgg
     2821 gattatgatt atcatctggt ctattttgtt aggtccatca ttttctttaa atttatttgc
     2881 taaaagttta ggtctatgta ctcgtgggtg tgtgaatgtt ttggtgttta cagaatgcat
     2941 ttgggacctg aacgactaga gactacttgt gtactgaatg catttgggac ctgcccccat
     3001 attcttaatg aattttaccg aatgtctcaa tttttcattt cataa
//
LOCUS       XM_071829909            2316 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative RNA polymerase II
            subunit B1 CTD phosphatase RPAP2 homolog (LOC139839759), transcript
            variant X1, mRNA.
ACCESSION   XM_071829909
VERSION     XM_071829909.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2316
                     /gene="LOC139839759"
                     /note="putative RNA polymerase II subunit B1 CTD
                     phosphatase RPAP2 homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839759"
     CDS             150..2015
                     /gene="LOC139839759"
                     /codon_start=1
                     /product="putative RNA polymerase II subunit B1 CTD
                     phosphatase RPAP2 homolog"
                     /protein_id="XP_071686010.1"
                     /db_xref="GeneID:139839759"
                     /translation="MSNKSSSSSVVAVKDAVHKIQLRLLDGIKSETLLFAAASLISKS
                     DYNDVVTERTIAQMCGYPLCTNPLPSSSPSEPPKKGRYRISLKEHKVYDLLETRMYCC
                     TKCVVDSRAYAESLEDERSLDLNKGKIDKVVRLFEGENGEMGSVENGDFGLGQLSIKE
                     NETASVANVSMGEWMGPSNAIEGYVPQHDRKKPGCKLKDSKLKMEEMSFFGEMDFTST
                     IIMHNDGYSISKTPPVQTKKETNCNKSNDRLTKSSGSSSNAKNVPKSTKTDKSSNAES
                     AVATNHNHVCDEEMEPMHKSSLKSSTSTRTNRSVSWADSKTDGDENRRLCEYSCTKDE
                     KEKTKCLSNMDESIDDADRAFRLASAEACAEALCKAAESVASGESEVTDAVSEAGLVI
                     LPPPLDNNEAVSEGAVDAQPTPLKWPKKTGITESHFFDSEDSWFDSPPEEFVLDLSPF
                     ATMFMSMFGWVSSSTLAYVYGRDDRFHEDYASVNGREYLRRIVLSDGRSSEIKQTLGG
                     CLSRALPGLVRDLRLPTPISIIENGMRCLLETMSFVDPLPGLRIKQWQVIVLLFIEAL
                     SVCRIPAVAPHLINRRSFFEKVFDDGGISREEYEVLKDLILPLGRAPQISTQSGA"
     misc_feature    264..497
                     /gene="LOC139839759"
                     /note="Rtr1/RPAP2 family; Region: RPAP2_Rtr1; pfam04181"
                     /db_xref="CDD:461212"
ORIGIN      
        1 ccgcctctgc aatttcataa tcctcttcca tctaaaattt tttctttttc caaaaatcat
       61 tccttcttca atcagttaaa tagtgaagcc acagatagat tgtctcgctg ttgttttggg
      121 ttgattttgt cacctgctgt tcttcaagga tgtcaaataa atcatcatca tcatctgtgg
      181 tagctgtgaa agatgctgta cacaagattc aactacgtct attagatggt attaaatccg
      241 aaaccctatt attcgcagcg gcttctttga tctccaagtc agattacaac gatgttgtca
      301 ccgaacgaac aattgctcaa atgtgtggct acccactttg caccaaccca ttaccatcct
      361 catccccttc agagcctcct aaaaagggca gataccgtat ctctttaaag gagcacaagg
      421 tttacgatct tttagaaaca cgaatgtatt gttgtaccaa atgtgttgtt gacagtaggg
      481 cgtatgctga aagtttggaa gatgaacgat ctctggatct taataaaggt aagatcgata
      541 aggtggtgag gttatttgag ggggagaatg gtgaaatggg ttctgtggag aatggtgatt
      601 ttggattggg gcagttgtcg attaaagaga atgaaactgc tagtgttgcg aatgtgtcta
      661 tgggggaatg gatgggcccg tcaaatgcaa ttgaaggata cgtcccacag catgatcgca
      721 aaaagcctgg atgtaaatta aaagattcga aactcaaaat ggaagaaatg agtttttttg
      781 gtgagatgga tttcacgagt accataatca tgcataacga tgggtatagc atatctaaaa
      841 cacctcccgt tcaaacaaaa aaggaaacta actgtaacaa gagtaacgat aggttgacca
      901 agtccagtgg ttcttcaagt aatgcgaaaa acgtgcctaa atcaactaaa acagataaat
      961 cgagtaatgc ggagagcgca gttgcgacaa atcataatca tgtttgtgat gaagaaatgg
     1021 agcctatgca caaatcgtct ctgaaatctt caacgtcaac aaggacaaat cgttccgttt
     1081 cttgggccga ttcaaaaacg gacggtgatg agaatcgaag actgtgcgag tacagctgca
     1141 caaaagacga aaaggagaaa accaagtgtt taagcaatat ggatgagagt atcgatgatg
     1201 ctgatcgtgc attccgactt gcgtcggcag aggcatgtgc cgaagcactg tgcaaagctg
     1261 cagaatctgt tgcctcgggg gaatcggaag ttactgatgc tgtttcggaa gctggacttg
     1321 tgatattgcc acctccactt gataacaatg aagccgtatc tgaaggtgca gttgatgcac
     1381 aacctactcc attgaaatgg ccaaagaaaa ccggaatcac cgagtcccat tttttcgatt
     1441 ctgaggattc atggttcgat agtccacctg aggagtttgt tttagaccta tcgccgtttg
     1501 caacaatgtt catgtcaatg tttggatggg tgtcttcatc aacgttggcg tatgtatacg
     1561 gacgcgatga tcgttttcac gaagattatg catcggttaa cgggagggag tatctacgac
     1621 gaatcgtatt gtcagatggt cggtcttctg aaatcaaaca aactctaggc ggttgtcttt
     1681 ctcgagcttt gccaggactt gttcgtgatc ttcgacttcc gacaccaatt tctattattg
     1741 aaaatgggat gcgttgtcta ttggagacga tgtcgttcgt tgatccactt ccaggtctga
     1801 gaataaaaca gtggcaggtg attgttcttt tgtttatcga ggctctttct gtgtgtcgga
     1861 tccctgcagt ggccccacat ttgataaata gaagaagctt ctttgaaaag gtgtttgatg
     1921 atggtggaat tagcagagaa gagtatgagg tgttgaagga tttaatactt ccattaggac
     1981 gagcccctca aatctcgacc cagagtggag cttagcggct cttaagtttt ggaatcaagc
     2041 cgtcttttgt aagaaaatat ccttggaaaa cagacaacca aatgtctttg tttttgagct
     2101 acaatttaga aaatatggat ttgtgaacaa tatcgttact aatctcgaaa acctttattt
     2161 atgttgtgtg acgaccctgg cctcatcttt ttctgctcta ctttaacagg taacgtctcg
     2221 atttttgttt ttttttggga atcaattttc ttctagtttc gaaatatgct tttctttggt
     2281 ttagttttag ctgcaagttt gaaacttgta tggtga
//
LOCUS       XR_011757066            2291 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative RNA polymerase II
            subunit B1 CTD phosphatase RPAP2 homolog (LOC139839759), transcript
            variant X2, misc_RNA.
ACCESSION   XR_011757066
VERSION     XR_011757066.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2291
                     /gene="LOC139839759"
                     /note="putative RNA polymerase II subunit B1 CTD
                     phosphatase RPAP2 homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839759"
     misc_RNA        1..2291
                     /gene="LOC139839759"
                     /product="putative RNA polymerase II subunit B1 CTD
                     phosphatase RPAP2 homolog, transcript variant X2"
                     /db_xref="GeneID:139839759"
ORIGIN      
        1 ccgcctctgc aatttcataa tcctcttcca tctaaaattt tttctttttc caaaaatcat
       61 tccttcttca atcagttaaa tagtgaagcc acagatagat tgtctcgctg ttgttttggg
      121 ttgattttgt cacctgctgt tcttcaagga tgtcaaataa atcatcatca tcatctgtgg
      181 tagctgtgaa agatgctgta cacaagattc aactacgtct attagatggt attaaatccg
      241 aaaccctatt attcgcagcg gcttctttga tctccaagtc agattacaac gatgttgtca
      301 ccgaacgaac aattgctcaa atgtgtggct acccactttg caccaaccca ttaccatcct
      361 catccccttc agagcctcct aaaaagggca gataccgtat ctctttaaag gagcacaagg
      421 tttacgatct tttagaaaca cgaatgtatt gttgtaccaa atgtgttgtt gacagtaggg
      481 cgtatgctga aagtttggaa gatgaacgat ctctggatct taataaaggt aagatcgata
      541 aggtggtgag gttatttgag ggggagaatg gtgaaatggg ttctgtggag aatggtgatt
      601 ttggattggg gcagttgtcg attaaagaga atgaaactgc tagtgttgcg aatgtgtcta
      661 tgggggaatg gatgggcccg tcaaatgcaa ttgaaggata cgtcccacag catgatcgca
      721 aaaagcctgg atgtaaatta aaagattcga aactcaaaat ggaagaaatg agtttttttg
      781 gtgagatgga tttcacgagt accataatca tgcataacga tgggtatagc atatctaaaa
      841 cacctcccgt tcaaacaaaa aaggaaacta actgtaacaa gagtaacgat aggttgacca
      901 agtccagtgg ttcttcaagt aatgcgaaaa acgtgcctaa atcaactaaa acagataaat
      961 cgagtaatgc ggagagcgca gttgcgacaa atcataatca tgtttgtgat gaagaaatgg
     1021 agcctatgca caaatcgtct ctgaaatctt caacgtcaac aaggacaaat cgttccgttt
     1081 cttgggccga ttcaaaaacg gacggtgatg agaatcgaag actgtgcgag tacagctgca
     1141 caaaagacga aaaggagaaa accaagtgtt taagcaatat ggatgagagt atcgatgatg
     1201 ctgatcgtgc attccgactt gcgtcggcag aggcatgtgc cgaagcactg tgcaaagctg
     1261 cagaatctgt tgcctcgggg gaatcggaag ttactgatgc tgtttcggaa gctggacttg
     1321 tgatattgcc acctccactt gataacaatg aagccgtatc tgaaggtgca gttgatgcac
     1381 aacctactcc attgaaatgg ccaaagaaaa ccggaatcac cgagtcccat tttttcgatt
     1441 ctgaggattc atggttcgat agtccacctg aggagtttgt tttagaccta tcgccgtttg
     1501 caacaatgtt catgtcaatg tttggatggg tgtcttcatc aacgttggcg tatgtatacg
     1561 gacgcgatga tcgttttcac gaagattatg catcggttaa cgggagggag tatctacgac
     1621 gaatcgtatt gtcagatggt cggtcttctg aaatcaaaca aactctaggc ggttgtcttt
     1681 ctcgagcttt gccaggactt gttcgtgatc ttcgacttcc gacaccaatt tctattattg
     1741 aaaatgggat gcgttgtcta ttggagacga tgtcgttcgt tgatccactt ccaggtctga
     1801 gaataaaaca gtggcaggtg attgttcttt tgtttatcga ggctctttct gtgtgtcgga
     1861 tccctgcagt ggccccacat ttgataaata gaagaagctt ctttgaaaag gtgtttgatg
     1921 atggtggaat tagcagagaa gagtatgagg tgttgaagga tttaatactt ccattaggac
     1981 gagcccctca aatctcgacc cagagtggag cttagcggct cttaagtttt ggaatcaagc
     2041 cgtcttttgt aagaaaatat ccttggaaaa cagacaacca aatgtctttg tttttgagct
     2101 acaatttaga aaatatggat ttgtgaacaa tatcgttact aatctcgaaa acctttattt
     2161 atgttgtgtg acgaccctgg cctcatcttt ttctgctcta ctttaacagt acaaaagctc
     2221 gttgaagtag acagacaaat atatttatgt ttgtttatga tcttgtaaag aattcatgtt
     2281 ctagttgctc a
//
LOCUS       XM_071829910            1790 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839760), mRNA.
ACCESSION   XM_071829910
VERSION     XM_071829910.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1790
                     /gene="LOC139839760"
                     /note="uncharacterized LOC139839760; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839760"
     CDS             119..1504
                     /gene="LOC139839760"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686011.1"
                     /db_xref="GeneID:139839760"
                     /translation="MDLLSKNSTSLVSAKPKFEIQGNDENELNEKLAYKLKVSGKKRS
                     YVTDINRRVRKKKMLGKRNKSKDLQEQPRLSKSISFDSSALRSHVDDDEDAGNNNLEI
                     GLNVQSNDTNINYHSPTPKFLKFNPDTHLEIIRQKNVKRFVKSDSFDCGMLQDSDVII
                     DESVGINEKHNERKNDDDDDDEEKEVFDDFKDHKGWNLNVFMLIGLILITLSIVFMNS
                     LTHLTTKEAKRAEFGGKAFDSMMSMVGSSSKSEIDRVYDEWDKKDFVVNTGELVQMQL
                     DKIKDVNGDESEESKLTERNDDDATDESGKVEVNETENEEEIKPCETKLEKESYSHIN
                     DKPKVVKLNNNGLEKNKIEGIKTLKFASFGTKFSGFIGGISLVILSVFCCSMMMKILK
                     KFAKQSLSSQTEHSNYEMSPLIGSFRIKKKIIKKPTSKTPEVTISLVRRSSRIYNRSF
                     TSSSSSLNASY"
ORIGIN      
        1 aaaaaaaaaa atcttttcct tataaaatcc ccaattacgg taacggtccc atccccgcca
       61 aatcccaaaa acaattccat ccgattatca accaaaatat ccaatttatt gaaaatttat
      121 ggatctttta agcaagaatt ccacttcatt agtatccgct aaacccaaat ttgagattca
      181 aggaaatgat gaaaatgaat tgaatgaaaa attggcttac aaattgaaag tttccggtaa
      241 gaaacgatca tatgttaccg atataaaccg tagagtacgt aagaagaaaa tgttgggtaa
      301 aagaaacaaa agcaaagatt tacaagaaca gccccgtttg tcgaaatcga ttagttttga
      361 ttcaagtgct ttaagatcgc atgttgatga cgatgaagat gcgggtaaca acaatttaga
      421 gattggtttg aatgtgcagt ctaatgatac taacatcaat tatcattccc ctacgccaaa
      481 gttcttgaag tttaatcccg acacacatct cgaaatcatt cgtcaaaaaa atgtaaaacg
      541 gtttgtaaaa agtgattcat ttgattgtgg gatgctacaa gattcggatg tgataattga
      601 tgaatcggtt ggtattaatg agaaacacaa tgagcgaaaa aatgatgatg atgatgatga
      661 tgaagagaaa gaagtatttg atgattttaa ggatcataag gggtggaatt tgaatgtgtt
      721 tatgttgatt ggtttgattt taatcacttt gagtatagtg ttcatgaact cgctgactca
      781 tttaacgact aaagaggcca aacgggctga atttggaggg aaagcttttg attcgatgat
      841 gtcaatggtg ggaagttcaa gtaagagtga gattgatcgc gtttacgatg agtgggataa
      901 gaaggatttt gttgttaata ctggtgaatt ggttcaaatg caacttgata agatcaaaga
      961 tgttaatggt gatgaaagtg aagaatcaaa attaacagaa cgtaacgacg atgatgcaac
     1021 tgatgagagt ggtaaggtag aagttaacga aactgagaac gaagaagaaa tcaaaccttg
     1081 tgaaacaaag ctcgaaaaag aaagttacag tcatatcaat gacaaaccga aagtagtgaa
     1141 actgaacaac aatggtcttg aaaaaaataa gattgaaggc ataaagactt taaaatttgc
     1201 aagttttggt acaaaatttt caggctttat tggtgggatt tcattggtga ttttgagtgt
     1261 tttttgctgt tcaatgatga tgaaaatatt gaagaagttt gctaagcaaa gtttatccag
     1321 tcaaacggaa cactcaaact atgaaatgtc acctttgatt ggaagcttca gaatcaaaaa
     1381 gaagattatc aagaaaccga caagcaaaac accagaggta acgatatcgt tagtgaggcg
     1441 atcaagcaga atatacaaca gatcctttac gtcgtcttca agtagcctca atgcctcata
     1501 ttgattatat gtttgtaata cactagttac taaaattgac ataatattat gtttagcaca
     1561 tactcttatt acttttcata tcattgtata tagatagata agataaatgt gtaagaagtt
     1621 cttctaattg taaccatctt tgtttctttg gtggttgtta acttgaacct actggataga
     1681 tggatagatg tggcagtttc aacccattta cttatgaaca ggtcgatttg ggttataatt
     1741 aatactagaa aagcaggtat cttgattaat acaagcataa aatgaaccct
//
LOCUS       XM_071829911            1706 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839761), mRNA.
ACCESSION   XM_071829911
VERSION     XM_071829911.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1706
                     /gene="LOC139839761"
                     /note="uncharacterized LOC139839761; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839761"
     CDS             532..1629
                     /gene="LOC139839761"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686012.1"
                     /db_xref="GeneID:139839761"
                     /translation="MLQRKSERPIGIDEKYPDDDEEIWFSFRPNFKIRFSRREFCLIT
                     GFRFSRRTDMAHYIPRSYDVETPPIRRRCFPKRKDNANITITDIQKLLYNGDDFVVSD
                     EDVVRLAIILIVERAFMGKQGIHVVSKKYLWLVEDFAKLNDYPWGNRIWDATYPVVKD
                     GFQARESQLEVGKGYTLAGFMWSFKIWILEAYRRAIKSFTHKTDKNGVPRALFWKRSS
                     AESFSVTDYLHLLNVMDDCPKNKRPFRTLHPTDVESGCQWWIKSCQYFDRTEVDEEVE
                     EHVEDELQDQEHGGGEQSQSQSQSQSQSQSQSQSQTNLSTNAKELYSSLVKRMDSVMT
                     RKFLTKFKLNLCMINIFDTISKVCKTESQNL"
     misc_feature    595..993
                     /gene="LOC139839761"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 ttaactattc tcgttcgatt actcatttat tatgtcgaaa ttgatttata agttttgttg
       61 cacaccaagt gttcgatgta atgcttcaac gagcttagtg atgcaaaact cacttaaact
      121 gttgcaagat ttgttaaagt tacagtcttt gaaaactaac atattataaa aactggaaca
      181 cgattgttta aggggcataa aactagaatc tggtataggc gcaaggaacg tcttgcgtcc
      241 ttgcgcttgt ccgaagtagc tggcgcaaga cacgtcttgc gttcttgcgc ctgtgtgata
      301 aaccagacgc aaggtattac ttgcgtcctt gcgcctgtac ttttttgctg aaaaactgtc
      361 tgtttcaagg atatgttgag gcgaagttga cgatgaagaa tatgttgaat gttatacctc
      421 aactaaaggc attaatgact gaaaatcaac aaaaaaattt ttaggggaac ttgttttggt
      481 ccttggctag atctttctta cacgggcaat gatccgggcc ttgtacatgc aatgctccaa
      541 agaaagagtg agcggccgat aggaatagac gaaaagtacc cagatgatga tgaggaaata
      601 tggtttagtt tccgtccgaa tttcaaaatt agatttagta ggcgggaatt ttgtctcatt
      661 acggggttta ggtttagtcg tcgcacggac atggcacatt acattccaag aagttatgat
      721 gtagaaacac caccgattag acgacgttgt ttcccaaaac gtaaagataa tgcaaacatt
      781 acaattaccg atatccaaaa gcttttatat aatggtgatg attttgtggt tagtgatgaa
      841 gatgtggtgc gactagccat tattttgatt gtggagagag catttatggg taagcaaggg
      901 attcatgtgg tgagcaaaaa atacctatgg ttagtcgaag actttgctaa attgaatgac
      961 tacccgtggg gtaatcgtat ttgggatgcc acttaccccg tagttaaaga tggatttcaa
     1021 gctcgggaaa gtcagttaga ggtcggaaag ggttatactt tggcgggttt tatgtggtca
     1081 tttaagattt ggattcttga ggcatatcga cgagccatta aaagttttac ccacaaaaca
     1141 gacaaaaatg gagtaccgag ggccttattt tggaaacgtt catcagctga gtctttttca
     1201 gtcactgatt acctgcatct actaaacgtt atggatgatt gtccgaagaa taaacgacct
     1261 tttcgtactc tgcatcccac tgatgttgag agtggatgtc aatggtggat aaaaagttgc
     1321 caatactttg ataggacgga agttgatgag gaagttgaag aacatgttga agatgaactg
     1381 caagatcagg aacatggtgg tggagaacag tctcaatctc aatctcaatc tcaatctcaa
     1441 tcacagtctc aatctcagtc tcaaacaaac ttatctacta atgcaaagga attatacagt
     1501 tctttggtga aacggatgga tagtgtgatg acccgaaaat ttctgaccaa atttaaactt
     1561 aatctttgta tgattaacat tttcgacacg ataagcaaag tttgtaaaac tgaatctcaa
     1621 aatttatgaa ctattcaaat acctttcggt tgttctcgac gatttgcgaa caattatatg
     1681 tatatagata catatatata tactat
//
LOCUS       XM_071829913            2684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides scarecrow-like protein 9
            (LOC139839763), mRNA.
ACCESSION   XM_071829913
VERSION     XM_071829913.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2684
                     /gene="LOC139839763"
                     /note="scarecrow-like protein 9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139839763"
     CDS             131..2239
                     /gene="LOC139839763"
                     /codon_start=1
                     /product="scarecrow-like protein 9"
                     /protein_id="XP_071686014.1"
                     /db_xref="GeneID:139839763"
                     /translation="MDGKMKANCNLLNLNSMKCEECDSILSDGDFIKAISLNESFVDW
                     NSIHHPSNSPVLDPCSYSSQSRLKDEGDVYEESDFSGSALKYINQMLMEEDIEDKNYM
                     FQESAALQAAEMSFYNVLMVKESPCTVSFNGSESTDSAAESVIPNSGGNKRTDGTSPS
                     CDVSYSISLPNNYSSLSSTSSSIVDGFVDSPVSILSSPIQFRKDIYEANRVFSNGNMI
                     LDYMSNDEKAVVKLEKKHESSSVSDKSRGKKNIHFEDHVENERSSKQSAVYTEPSVRS
                     KVFDDLLLYGAAETHPFQGEYKGAANVQQKGQLKGSNGVKTRGKEKKEVVDLRTLLTL
                     CAQSVSINDQRGVTDLLKRIREHASPTGDGMQRLAHYFSAGLEARMAGSGTGIYKALV
                     SRPTSAVNFLKAYQLFLSNFPFIKLTYLVSNKTIMQAAHNKRKLHIIDFGILYGFQWP
                     CLIERLSTRPGGPPELRITGIDFPCPGFRPSQRVEETGCRLTNYAETFGVPFKFKAIA
                     KKWETITLEDLDLDDDETLVVNCGYRFRNLLDESVMVDSPRNKVLNLIRKTNPKIFIQ
                     GVVNGSYNAPFFVTRFREALFFFSSVFDMLDATVDREIEDRMLVEKTIYGREAMNVIA
                     CEGGERIERPETYKQWQVRNQRAGFCPVPLDPEILKMAYGKARTGYHKDLMIDEDGHW
                     LLQGWKGRIIYAISCWKPDN"
     misc_feature    1112..2227
                     /gene="LOC139839763"
                     /note="GRAS domain family; Region: GRAS; pfam03514"
                     /db_xref="CDD:397536"
ORIGIN      
        1 gagctcaaag aaaaagtgtt cactcttcgg tgtatacact tcatttcaag ttttgtatgt
       61 tgcttttaaa tagtcaattc ttcaattctt gttcctgctc atttctaggg ttttgcctca
      121 ggagtgggtt atggatggga aaatgaaggc gaattgcaat ttattgaatt taaattcaat
      181 gaaatgtgaa gaatgtgatt cgattttatc agatggggat tttataaagg caattagttt
      241 gaatgagtca tttgtagatt ggaattcgat acatcatccg tcaaattcgc ccgttttaga
      301 tccttgtagc tatagttctc aatctaggtt aaaggatgaa ggagatgttt atgaagaatc
      361 tgattttagt ggttcagctc tcaaatacat caatcaaatg cttatggaag aagatataga
      421 agataagaat tatatgtttc aagagtctgc tgctctccaa gctgcagaaa tgtcatttta
      481 taatgttctt atggtgaaag aatcaccttg tacggtttct tttaacggta gtgaaagtac
      541 tgattctgct gcagaatcag ttatacctaa ctctggtgga aacaaacgta ccgacggtac
      601 tagtcctagt tgtgatgtta gttattctat tagtttgcca aataattata gctcgttgag
      661 tagtactagt agtagtatcg ttgatggatt tgtagactca cctgtgagta ttttaagttc
      721 tcccattcag tttagaaaag atatatatga agcaaatagg gttttttcta atggtaacat
      781 gatcttagat tatatgagca atgatgaaaa ggcagtagtt aaattggaga agaaacatga
      841 atctagttct gtttcagata aatcaagagg aaagaagaat attcatttcg aagatcatgt
      901 tgaaaacgaa aggagtagta aacaatcagc agtttatact gagccatctg tgaggtccaa
      961 ggtgtttgat gatctcctgc tgtatggtgc agccgaaact catccatttc aaggtgaata
     1021 taaaggggct gctaatgtgc aacaaaaggg tcaactcaag gggtctaacg gggtcaaaac
     1081 ccgtggcaag gaaaaaaagg aagtggtaga tttgagaaca cttttgaccc tgtgtgcgca
     1141 gtcggtttca atcaatgacc aaaggggtgt aaccgattta ctgaaacgga taagagagca
     1201 cgcttcacca acgggtgatg ggatgcaacg tttggctcac tacttttctg ctggactcga
     1261 agcacgcatg gctggctcgg gaactgggat ctataaagca ctcgtttcaa ggcctacatc
     1321 ggctgtcaat tttttgaaag cgtaccaatt attccttagt aactttcctt ttattaagct
     1381 tacttatctt gtttcgaata agactattat gcaagcagca cacaacaaga ggaagctgca
     1441 cataatagat tttggaatcc tatatggttt ccaatggcct tgtctcattg aacggctttc
     1501 aactcgaccc ggtggcccac cagagcttcg aataacggga attgacttcc cgtgtcctgg
     1561 ttttcgaccg tcccaacggg ttgaagaaac ggggtgtagg ttaacgaatt atgcagaaac
     1621 ttttggtgtt ccgtttaagt ttaaagctat agccaaaaag tgggaaacaa tcacactcga
     1681 ggatcttgac cttgatgatg atgaaacttt ggttgtgaat tgtggataca ggtttaggaa
     1741 cttacttgat gaatcagtta tggttgatag tccacgaaat aaggtcttaa accttatcag
     1801 aaaaacgaat ccgaaaattt tcatacaagg ggttgttaat gggtcctaca atgcgccttt
     1861 ttttgtcaca cgattccgag aagctctgtt tttcttctct tctgtgtttg atatgcttga
     1921 tgctaccgtg gatcgggaga ttgaagatag gatgttggtt gaaaaaacaa tatatggtcg
     1981 agaagcgatg aatgttattg cttgtgaagg tggtgagaga atcgaacgac ccgaaactta
     2041 taaacaatgg caggttcgga atcaacgggc cgggttttgt ccggttccgt tagacccgga
     2101 aattttgaag atggcttatg gtaaggcgag aacgggctac cataaggatt taatgatcga
     2161 tgaagatggt cactggttgt tgcaggggtg gaaagggcgc ataatatatg ccatatcttg
     2221 ctggaaacca gataactgaa catgtatcat catcatctag aagtaggaaa catcattatt
     2281 tattcattag aataaataat gatcgatgaa gatggccact ggatttaatg atcgatgaag
     2341 atgatcaccg gctttttctt atgaatttat tggatatcgt tattcgacaa gcctaggcca
     2401 tttatccgga aggtccagtt acactcatga cttgagtatg ttaaaacttt tgacaaatga
     2461 agcatcctgg gttcagttgg ttttagtgat aatcctgatt atgctaataa gaggtacgca
     2521 catcaacttt attgggcggc tttgttgtgt ggttgatgaa aatgaaaaaa aaaaaaaagg
     2581 ccgtaggtgt gattgtgatg tagttgattt tgtataaagt tagaatgttg aattgttaat
     2641 cagtgtaata atgctatctc tttcagttaa tgcaatccat taaa
//
LOCUS       XM_071829914            1954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-epi-6-deoxocathasterone
            23-monooxygenase CYP90D1-like (LOC139839764), transcript variant
            X1, mRNA.
ACCESSION   XM_071829914
VERSION     XM_071829914.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1954
                     /gene="LOC139839764"
                     /note="3-epi-6-deoxocathasterone 23-monooxygenase
                     CYP90D1-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139839764"
     CDS             31..1476
                     /gene="LOC139839764"
                     /codon_start=1
                     /product="3-epi-6-deoxocathasterone 23-monooxygenase
                     CYP90D1-like isoform X1"
                     /protein_id="XP_071686015.1"
                     /db_xref="GeneID:139839764"
                     /translation="MEFIFYSTTLTIILSTVVLLFFTIFFINNRQSLRRSLPPNLLGS
                     MGWPIIGETLDFISCGYTDHPQTFMEKRRLLYGKVFKSHLFGSPTIVSTDAKVSRIIL
                     QSDANSFVPSYPKSLTELMGEASILRINGSFHRKIHGLIGSFFKSPYLKACVTSNMRK
                     LLLRSMAAWNEDRPIYIQDETKHIAFQVLAKALIGLDPGEEMDLLMVQFQEFIAGLMS
                     LPINLPGTQLHKSLQAKKKMIKLVLRIIRDKRIDGVACSQHSKDVTDVLLNDQSAKLT
                     DELISDNMIDLMIPGEDSVPILMTLAVKYLSDCPKALHQLKEENLKLKRRKEELGDPL
                     CWDDYLSLPFTQSVIKETLRMGNIIMGVIRKAMKDVEINGYLIPKGWCVLTHFRSVHL
                     DDNYYESPLHFNPWRWQDKDMNSFNNIGFTPFGGGLRLCPGLDLARLEASIFLHHFVT
                     EFRWVAEKDTIINFPTVRMKNRMPIWVKKEH"
     misc_feature    154..1473
                     /gene="LOC139839764"
                     /note="cytochrome P450 (CYP) superfamily; Region:
                     cytochrome_P450; cl41757"
                     /db_xref="CDD:477761"
     misc_feature    order(430..432,442..444,463..465,595..597,886..891,
                     898..903,910..915,922..924,1087..1089,1114..1116,
                     1120..1122,1189..1191,1297..1305,1315..1329,1336..1341)
                     /gene="LOC139839764"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410669"
     misc_feature    order(664..669,886..888,895..900,910..912,1108..1119)
                     /gene="LOC139839764"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410669"
ORIGIN      
        1 ctaattaaac acacaaaact agcatcgttc atggagttca ttttctactc aaccacctta
       61 acaataattt tatccaccgt agtcctctta ttcttcacaa tcttcttcat caacaaccgc
      121 caatcactgc gtagatcatt gccaccgaat ctcctaggat ccatgggttg gcctattatc
      181 ggcgaaaccc tagatttcat ctcatgtggt tacaccgatc atcctcaaac gttcatggaa
      241 aaacgccgtt tattgtatgg gaaggtgttc aaatcccatt tgtttggtag tccaacgatt
      301 gtatcgactg atgcaaaagt gagtcgaatt atattacaaa gtgatgctaa tagtttcgtg
      361 ccttcatatc caaaatcact aaccgagttg atgggagagg cttcgatttt gaggatcaat
      421 ggaagttttc accggaaaat tcatggcctt atcggttcct ttttcaagtc tccatatctt
      481 aaagcgtgtg ttacttcaaa tatgcgaaaa ttgcttcttc gatccatggc tgcttggaac
      541 gaagatcgtc ccatttacat acaagatgaa actaaacata ttgcgtttca agtactagcc
      601 aaagctttaa ttggtttgga tccgggtgaa gaaatggatc ttttgatggt gcaatttcaa
      661 gaattcattg cgggtctcat gtcattacct ataaacttac ccggtacaca acttcataaa
      721 tcattacaag ccaagaaaaa gatgataaaa ttagtcctta gaattattcg tgataaacgg
      781 atagacggtg ttgcttgttc acaacattcg aaggatgtga ctgatgtgtt gcttaacgat
      841 cagagcgcaa agttaacgga cgagttaata tctgataata tgattgattt gatgattcct
      901 ggtgaagatt ctgtgcctat tcttatgacc ttagctgtca aatacttatc agattgtccc
      961 aaagctcttc atcaacttaa ggaggaaaat ttgaagttga aaagacgtaa agaagaactc
     1021 ggggatccat tatgttggga tgattactta tcgttgccat ttacacaaag tgtaattaaa
     1081 gaaacactaa gaatgggaaa tataataatg ggtgtgatta gaaaggctat gaaagatgta
     1141 gagattaatg ggtacttaat accaaaagga tggtgtgtat taactcattt tagatcagtt
     1201 catcttgatg ataattatta tgagtctcct ctccatttta atccttggag gtggcaggat
     1261 aaagacatga acagttttaa taatattgga ttcactcctt ttggaggagg gcttaggttg
     1321 tgtcctggtc ttgatttggc tcgactagaa gcttccatat tccttcatca ctttgttact
     1381 gagttcaggt gggtagctga gaaagacacc ataatcaatt tcccaacagt aagaatgaag
     1441 aacagaatgc caatttgggt caaaaaggag cattaagagg tgggccgggt tgaggttgtt
     1501 ataattgaag aattttcatg ggcccattta tgtctaaagc aaaagaaaag gctgatcaac
     1561 aaccacacgt gtgggtggac atgacatgac tcatgagatg atgacttatc tttctcaacc
     1621 gtggtgatat gtattccata ttttttttat ctatatatca tactcgtagt tcataattat
     1681 gttatagtaa cataaaaagt gttgtacata taaaagatga tagtatgcga atcatcactt
     1741 catcaaatac atgcataggt ttaaagcatg acacttgtgc agcggtgatt caataggaat
     1801 tccttttatg tgaacttgat cagggttaat tagctaagtt tatatggtta atcaagggcc
     1861 ataggtagta atgtgttatg ttcattatta tcatacgtcc atgtataaag tgtaggagtt
     1921 ggttgtcata atgatgcaaa aatccatatt ctag
//
LOCUS       XM_071829915            1768 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-epi-6-deoxocathasterone
            23-monooxygenase CYP90D1-like (LOC139839764), transcript variant
            X2, mRNA.
ACCESSION   XM_071829915
VERSION     XM_071829915.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1768
                     /gene="LOC139839764"
                     /note="3-epi-6-deoxocathasterone 23-monooxygenase
                     CYP90D1-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139839764"
     CDS             31..1290
                     /gene="LOC139839764"
                     /codon_start=1
                     /product="3-epi-6-deoxocathasterone 23-monooxygenase
                     CYP90D1-like isoform X2"
                     /protein_id="XP_071686016.1"
                     /db_xref="GeneID:139839764"
                     /translation="MEFIFYSTTLTIILSTVVLLFFTIFFINNRQSLRRSLPPNLLGS
                     MGWPIIGETLDFISCGYTDHPQTFMEKRRLLYGKVFKSHLFGSPTIVSTDAKVSRIIL
                     QSDANSFVPSYPKSLTELMGEASILRINGSFHRKIHGLIGSFFKSPYLKACVTSNMRK
                     LLLRSMAAWNEDRPIYIQDETKHIAFQVLAKALIGLDPGEEMDLLMVQFQEFIAGLMS
                     LPINLPGTQLHKSLQAKKKMIKLVLRIIRDKRIDGVACSQHSKDVTDVLLNDQSAKLT
                     DELISDNMIDLMIPGEDSVPILMTLAVKYLSDCPKALHQLKEENLKLKRRKEELGDPL
                     CWDDYLSLPFTQSDKDMNSFNNIGFTPFGGGLRLCPGLDLARLEASIFLHHFVTEFRW
                     VAEKDTIINFPTVRMKNRMPIWVKKEH"
     misc_feature    154..1287
                     /gene="LOC139839764"
                     /note="cytochrome P450 (CYP) superfamily; Region:
                     cytochrome_P450; cl41757"
                     /db_xref="CDD:477761"
     misc_feature    order(430..432,442..444,463..465,595..597,886..891,
                     898..903,910..915,922..924,1111..1119,1129..1143,
                     1150..1155)
                     /gene="LOC139839764"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410669"
ORIGIN      
        1 ctaattaaac acacaaaact agcatcgttc atggagttca ttttctactc aaccacctta
       61 acaataattt tatccaccgt agtcctctta ttcttcacaa tcttcttcat caacaaccgc
      121 caatcactgc gtagatcatt gccaccgaat ctcctaggat ccatgggttg gcctattatc
      181 ggcgaaaccc tagatttcat ctcatgtggt tacaccgatc atcctcaaac gttcatggaa
      241 aaacgccgtt tattgtatgg gaaggtgttc aaatcccatt tgtttggtag tccaacgatt
      301 gtatcgactg atgcaaaagt gagtcgaatt atattacaaa gtgatgctaa tagtttcgtg
      361 ccttcatatc caaaatcact aaccgagttg atgggagagg cttcgatttt gaggatcaat
      421 ggaagttttc accggaaaat tcatggcctt atcggttcct ttttcaagtc tccatatctt
      481 aaagcgtgtg ttacttcaaa tatgcgaaaa ttgcttcttc gatccatggc tgcttggaac
      541 gaagatcgtc ccatttacat acaagatgaa actaaacata ttgcgtttca agtactagcc
      601 aaagctttaa ttggtttgga tccgggtgaa gaaatggatc ttttgatggt gcaatttcaa
      661 gaattcattg cgggtctcat gtcattacct ataaacttac ccggtacaca acttcataaa
      721 tcattacaag ccaagaaaaa gatgataaaa ttagtcctta gaattattcg tgataaacgg
      781 atagacggtg ttgcttgttc acaacattcg aaggatgtga ctgatgtgtt gcttaacgat
      841 cagagcgcaa agttaacgga cgagttaata tctgataata tgattgattt gatgattcct
      901 ggtgaagatt ctgtgcctat tcttatgacc ttagctgtca aatacttatc agattgtccc
      961 aaagctcttc atcaacttaa ggaggaaaat ttgaagttga aaagacgtaa agaagaactc
     1021 ggggatccat tatgttggga tgattactta tcgttgccat ttacacaaag tgataaagac
     1081 atgaacagtt ttaataatat tggattcact ccttttggag gagggcttag gttgtgtcct
     1141 ggtcttgatt tggctcgact agaagcttcc atattccttc atcactttgt tactgagttc
     1201 aggtgggtag ctgagaaaga caccataatc aatttcccaa cagtaagaat gaagaacaga
     1261 atgccaattt gggtcaaaaa ggagcattaa gaggtgggcc gggttgaggt tgttataatt
     1321 gaagaatttt catgggccca tttatgtcta aagcaaaaga aaaggctgat caacaaccac
     1381 acgtgtgggt ggacatgaca tgactcatga gatgatgact tatctttctc aaccgtggtg
     1441 atatgtattc catatttttt ttatctatat atcatactcg tagttcataa ttatgttata
     1501 gtaacataaa aagtgttgta catataaaag atgatagtat gcgaatcatc acttcatcaa
     1561 atacatgcat aggtttaaag catgacactt gtgcagcggt gattcaatag gaattccttt
     1621 tatgtgaact tgatcagggt taattagcta agtttatatg gttaatcaag ggccataggt
     1681 agtaatgtgt tatgttcatt attatcatac gtccatgtat aaagtgtagg agttggttgt
     1741 cataatgatg caaaaatcca tattctag
//
LOCUS       XM_071829916            1224 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FLX-like 3
            (LOC139839765), transcript variant X1, mRNA.
ACCESSION   XM_071829916
VERSION     XM_071829916.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1224
                     /gene="LOC139839765"
                     /note="protein FLX-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839765"
     CDS             131..961
                     /gene="LOC139839765"
                     /codon_start=1
                     /product="protein FLX-like 3"
                     /protein_id="XP_071686017.1"
                     /db_xref="GeneID:139839765"
                     /translation="MAGRNRYPHEVYDNRHGYPPPGPPSRAPRPMPPHPAMLEEELEM
                     QHHEIRRLLDENRRLVEDRIALQRELGAAREELRRMNIAIADIEAENEMHSRQLIENS
                     MKLEADLRAAEPLKKEAAQLHAEVKRLSSIRHDLSGKVQMLKKDLTKLQIDNEQLPGL
                     RAEHERIHQELMHARAAIDYEKKGGLELMEQRQSMEKNLVSMAREVEKLRAELASTDV
                     GSWSAGGSYGMQYGVSDGRFPPQYGDGYVAHLGTAVKGPLYGSSSARAGHENSRMTRH
                     "
     misc_feature    <242..>769
                     /gene="LOC139839765"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      
        1 acacaattca gttaccgaat gttcgttcgt tctctcacga actacacgca ggtgttatta
       61 aacaagcaaa taacataaac aaatcttcac aatttaatca attccttcac atcatcaagg
      121 gtgatattag atggcaggga gaaaccgtta tcctcatgaa gtatatgaca accgacatgg
      181 gtatccaccg ccagggcctc catcccgggc ccctagacct atgccccctc atcctgcaat
      241 gctggaagaa gaacttgaaa tgcaacatca tgaaatccgg aggcttttgg atgaaaatag
      301 gaggctagtt gaagatcgaa ttgctctgca gcgagagttg ggtgctgcac gagaggaact
      361 tagacgaatg aatatagcca tcgctgatat tgaagcagaa aatgaaatgc attcaagaca
      421 gttaattgaa aatagtatga aactagaagc tgatcttcgt gccgccgaac ctttaaagaa
      481 agaggctgca caactccatg cagaagtcaa acgactaagt tctataagac atgatctttc
      541 tgggaaggtt cagatgttga aaaaagacct cacaaaattg caaatagata acgagcaact
      601 tcctggttta agagctgagc atgagagaat tcatcaggag cttatgcatg ctagggctgc
      661 tattgattat gagaagaaag gaggtctaga gctgatggaa caaagacagt caatggagaa
      721 gaatttggtt tccatggccc gtgaagtaga gaagcttcgt gcagaacttg caagtactga
      781 tgttggatct tggtctgctg gtggatcata tgggatgcag tatggcgttt ctgatggccg
      841 ttttcctcct cagtatggtg atggatatgt tgctcacctg ggtactgctg tcaagggtcc
      901 gctatacggt tcaagctctg caagggctgg gcacgagaac tctcgcatga ctcggcattg
      961 acatgtggat ggcttgtgtc cccctttgca gaaaaacata tcttctacat tttctcaaaa
     1021 atccatgatt ggtggctaga aatgtatggc tctcctgtgt ttgcatttaa ataagtaatc
     1081 cttatatttg aactattccc tatttaatct agtgcatttg gaatattagg ttgctttact
     1141 acaacttatg gaaatttttc tcttgtatgg catgattatg tagtgttttc cgtgactttg
     1201 atatttaagg ctacattata ttat
//
LOCUS       XR_011757067            2148 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FLX-like 3
            (LOC139839765), transcript variant X2, misc_RNA.
ACCESSION   XR_011757067
VERSION     XR_011757067.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2148
                     /gene="LOC139839765"
                     /note="protein FLX-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839765"
     misc_RNA        1..2148
                     /gene="LOC139839765"
                     /product="protein FLX-like 3, transcript variant X2"
                     /db_xref="GeneID:139839765"
ORIGIN      
        1 acacaattca gttaccgaat gttcgttcgt tctctcacga actacacgca ggtgttatta
       61 aacaagcaaa taacataaac aaatcttcac aatttaatca attccttcac atcatcaagg
      121 gtgatattag atggcaggga gaaaccgtta tcctcatgaa gtatatgaca accgacatgg
      181 gtatccaccg ccagggcctc catcccgggc ccctagacct atgccccctc atcctgcaat
      241 gctggaagaa gaacttgaaa tgcaacatca tgaaatccgg aggcttttgg atgaaaatag
      301 gaggctagtt gaagatcgaa ttgctctgca gcgagagttg ggtgctgcac gagaggaact
      361 tagacgaatg aatatagcca tcgctgatat tgaagcagaa aatgaaatgc attcaagaca
      421 gttaattgaa aatagtatga aactagaagc tgatcttcgt gccgccgaac ctttaaagaa
      481 agaggctgca caactccatg cagaagtcaa acgactaagt tctataagac atgatctttc
      541 tgggaaggtt cagatgttga aaaaagacct cacaaaattg caaatagata acgagcaact
      601 tcctggttta agagctgagc atgagagaat tcatcaggag cttatgcatg ctagggctgc
      661 tattgattat gagaagaaag gaggtctaga gctgatggaa caaagacagt caatggagaa
      721 gaatttggtt tccatggccc gtgaagtaga gaagcttcgt gcagaacttg caagtactga
      781 tgttggatct tggtctgctg gtggatcata tgggatgcag tatggcgttt ctgatggccg
      841 ttttcctcct cagtatggtg atggatatgt tgctcacctg ggtactgctg tcaagggtcc
      901 gctatacggt tcaagctctg caagggctgg gcacgagaac tctcgcatga ctcggcattg
      961 acatgtggat ggcttgtgtc cccctttgca gaaaaacata tcttctacat tttctcaaaa
     1021 atccatgatt ggtggctaga aatgtatggc tctcctgtgt ttgcatttaa ataacaattc
     1081 ttaaggttgt cccagtttta caccagaagc tatctttaac agagtatcac atttggatta
     1141 aaagaccatc cggcaatata aatcaaatgt ttagcatcct caatggctag gaaaatgtcc
     1201 tcccaaagtt ttcttggtga tccacatata ttagaaggtg gttggaacgt tagattatga
     1261 tgcgagtctt gatacaatgt gacactgcag ttactccttt gttgaaatgt agcgtctctt
     1321 agtccattga attcattgtt gtcaatcatc ttttgccaac ttttttctat ttctgctggt
     1381 ttgaaccaca acatgaatct gattttaata tctggatgtg gcttcccgtt ttccatacac
     1441 accggaaaca acccgtcaat caggcttgac ttttctaaca actgttgggc ctgaatgttg
     1501 actttcccga ggatggtgca tgttgtcttg agggttatcg tgattgttga agttattgga
     1561 tgagcacaaa gaacacataa ggctttccgg ttggattaat gcactgaaaa aggtaaaaca
     1621 gtcggtaagc ttttcatgtc tagtgtcgtt aataaatcct tacttcattc tacattgttc
     1681 tacattcatg catggtttca ttcctattct gtcttcattg atgttttatg caatttttag
     1741 aaaatagttt ctacatgtag actatgaata tgaactgaaa aaatgataat aacaacgttg
     1801 tgcaccctta aaaccatcat tagcgagagg atactcacat taagtagaaa tggtggtgaa
     1861 taaggtgtgg catgaaagat ggtagcttca agtgttccat gaagaaactt tggttttgca
     1921 tccatcgttt aaaaatttgt ttgagctaat tatgtaggat ataccatata taggaatcta
     1981 gtaaaatttg tgttgtgaac taaaatatga aagaaacctt aaaagcaaat atgcattttg
     2041 agtggaactg cagttttagg gaaacttgta aaagtctgga ggttgaatct tagaggcaac
     2101 catcaaacgt aaaatgtttc ttattcttca agtacaaatt tctgtttt
//
LOCUS       XR_011757068            2118 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FLX-like 3
            (LOC139839765), transcript variant X3, misc_RNA.
ACCESSION   XR_011757068
VERSION     XR_011757068.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2118
                     /gene="LOC139839765"
                     /note="protein FLX-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839765"
     misc_RNA        1..2118
                     /gene="LOC139839765"
                     /product="protein FLX-like 3, transcript variant X3"
                     /db_xref="GeneID:139839765"
ORIGIN      
        1 acacaattca gttaccgaat gttcgttcgt tctctcacga actacacgca ggtgttatta
       61 aacaagcaaa taacataaac aaatcttcac aatttaatca attccttcac atcatcaagg
      121 gtgatattag atggcaggga gaaaccgtta tcctcatgaa gtatatgaca accgacatgg
      181 gtatccaccg ccagggcctc catcccgggc ccctagacct atgccccctc atcctgcaat
      241 gctggaagaa gaacttgaaa tgcaacatca tgaaatccgg aggcttttgg atgaaaatag
      301 gaggctagtt gaagatcgaa ttgctctgca gcgagagttg ggtgctgcac gagaggaact
      361 tagacgaatg aatatagcca tcgctgatat tgaagcagaa aatgaaatgc attcaagaca
      421 gttaattgaa aatagtatga aactagaagc tgatcttcgt gccgccgaac ctttaaagaa
      481 agaggctgca caactccatg cagaagtcaa acgactaagt tctataagac atgatctttc
      541 tgggaaggtt cagatgttga aaaaagacct cacaaaattg caaatagata acgagcaact
      601 tcctggttta agagctgagc atgagagaat tcatcaggag cttatgcatg ctagggctgc
      661 tattgattat gagaagaaag gaggtctaga gctgatggaa caaagacagt caatggagaa
      721 gaatttggtt tccatggccc gtgaagtaga gaagcttcgt gcagaacttg caagtactga
      781 tgttggatct tggtctgctg gtggatcata tgggatgcag tatggcgttt ctgatggccg
      841 ttttcctcct cagtatggtg atggatatgt tgctcacctg ggtactgctg tcaagggtcc
      901 gctatacggt tcaagctctg caagggctgg gcacgagaac tctcgcatga ctcggcattg
      961 acatgtggat ggcttgtgtc cccctttgca gaaaaacata tcttctacat tttctcaaaa
     1021 atccatgatt ggtggctaga aatcaattct taaggttgtc ccagttttac accagaagct
     1081 atctttaaca gagtatcaca tttggattaa aagaccatcc ggcaatataa atcaaatgtt
     1141 tagcatcctc aatggctagg aaaatgtcct cccaaagttt tcttggtgat ccacatatat
     1201 tagaaggtgg ttggaacgtt agattatgat gcgagtcttg atacaatgtg acactgcagt
     1261 tactcctttg ttgaaatgta gcgtctctta gtccattgaa ttcattgttg tcaatcatct
     1321 tttgccaact tttttctatt tctgctggtt tgaaccacaa catgaatctg attttaatat
     1381 ctggatgtgg cttcccgttt tccatacaca ccggaaacaa cccgtcaatc aggcttgact
     1441 tttctaacaa ctgttgggcc tgaatgttga ctttcccgag gatggtgcat gttgtcttga
     1501 gggttatcgt gattgttgaa gttattggat gagcacaaag aacacataag gctttccggt
     1561 tggattaatg cactgaaaaa ggtaaaacag tcggtaagct tttcatgtct agtgtcgtta
     1621 ataaatcctt acttcattct acattgttct acattcatgc atggtttcat tcctattctg
     1681 tcttcattga tgttttatgc aatttttaga aaatagtttc tacatgtaga ctatgaatat
     1741 gaactgaaaa aatgataata acaacgttgt gcacccttaa aaccatcatt agcgagagga
     1801 tactcacatt aagtagaaat ggtggtgaat aaggtgtggc atgaaagatg gtagcttcaa
     1861 gtgttccatg aagaaacttt ggttttgcat ccatcgttta aaaatttgtt tgagctaatt
     1921 atgtaggata taccatatat aggaatctag taaaatttgt gttgtgaact aaaatatgaa
     1981 agaaacctta aaagcaaata tgcattttga gtggaactgc agttttaggg aaacttgtaa
     2041 aagtctggag gttgaatctt agaggcaacc atcaaacgta aaatgtttct tattcttcaa
     2101 gtacaaattt ctgtttta
//
LOCUS       XR_011757069            1805 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FLX-like 3
            (LOC139839765), transcript variant X4, misc_RNA.
ACCESSION   XR_011757069
VERSION     XR_011757069.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1805
                     /gene="LOC139839765"
                     /note="protein FLX-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839765"
     misc_RNA        1..1805
                     /gene="LOC139839765"
                     /product="protein FLX-like 3, transcript variant X4"
                     /db_xref="GeneID:139839765"
ORIGIN      
        1 acacaattca gttaccgaat gttcgttcgt tctctcacga actacacgca ggtgttatta
       61 aacaagcaaa taacataaac aaatcttcac aatttaatca attccttcac atcatcaagg
      121 gtgatattag atggcaggga gaaaccgtta tcctcatgaa gtatatgaca accgacatgg
      181 gtatccaccg ccagggcctc catcccgggc ccctagacct atgccccctc atcctgcaat
      241 gctggaagaa gaacttgaaa tgcaacatca tgaaatccgg aggcttttgg atgaaaatag
      301 gaggctagtt gaagatcgaa ttgctctgca gcgagagttg ggtgctgcac gagaggaact
      361 tagacgaatg aatatagcca tcgctgatat tgaagcagaa aatgaaatgc attcaagaca
      421 gttaattgaa aatagtatga aactagaagc tgatcttcgt gccgccgaac ctttaaagaa
      481 agaggctgca caactccatg cagaagtcaa acgactaagt tctataagac atgatctttc
      541 tgggaaggtt cagatgttga aaaaagacct cacaaaattg caaatagata acgagcaact
      601 tcctggttta agagctgagc atgagagaat tcatcaggag cttatgcatg ctagggctgc
      661 tattgattat gagaagaaag gaggtctaga gctgatggaa caaagacagt caatggagaa
      721 gaatttggtt tccatggccc gtgaagtaga gaagcttcgt gcagaacttg caagtactga
      781 tgttggatct tggtctgctg gtggatcata tgggatgcag tatggcgttt ctgatggccg
      841 ttttcctcct cagtatggtg atggatatgt tgctcacctg ggtactgctg tcaagggtcc
      901 gctatacggt tcaagctctg caagggctgg gcacgagaac tctcgcatga ctcggcattg
      961 acatgtggat ggcttgtgtc cccctttgca gaaaaacata tcttctacat tttctcaaaa
     1021 atccatgatt ggtggctaga aatgtatggc tctcctgtgt ttgcatttaa ataacaattc
     1081 ttaaggttgt cccagtttta caccagaagc tatctttaac agaggcttga cttttctaac
     1141 aactgttggg cctgaatgtt gactttcccg aggatggtgc atgttgtctt gagggttatc
     1201 gtgattgttg aagttattgg atgagcacaa agaacacata aggctttccg gttggattaa
     1261 tgcactgaaa aaggtaaaac agtcggtaag cttttcatgt ctagtgtcgt taataaatcc
     1321 ttacttcatt ctacattgtt ctacattcat gcatggtttc attcctattc tgtcttcatt
     1381 gatgttttat gcaattttta gaaaatagtt tctacatgta gactatgaat atgaactgaa
     1441 aaaatgataa taacaacgtt gtgcaccctt aaaaccatca ttagcgagag gatactcaca
     1501 ttaagtagaa atggtggtga ataaggtgtg gcatgaaaga tggtagcttc aagtgttcca
     1561 tgaagaaact ttggttttgc atccatcgtt taaaaatttg tttgagctaa ttatgtagga
     1621 tataccatat ataggaatct agtaaaattt gtgttgtgaa ctaaaatatg aaagaaacct
     1681 taaaagcaaa tatgcatttt gagtggaact gcagttttag ggaaacttgt aaaagtctgg
     1741 aggttgaatc ttagaggcaa ccatcaaacg taaaatgttt cttattcttc aagtacaaat
     1801 ttctg
//
LOCUS       XR_011757070            1618 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FLX-like 3
            (LOC139839765), transcript variant X5, misc_RNA.
ACCESSION   XR_011757070
VERSION     XR_011757070.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1618
                     /gene="LOC139839765"
                     /note="protein FLX-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839765"
     misc_RNA        1..1618
                     /gene="LOC139839765"
                     /product="protein FLX-like 3, transcript variant X5"
                     /db_xref="GeneID:139839765"
ORIGIN      
        1 acacaattca gttaccgaat gttcgttcgt tctctcacga actacacgca ggtgttatta
       61 aacaagcaaa taacataaac aaatcttcac aatttaatca attccttcac atcatcaagg
      121 gtgatattag atggcaggga gaaaccgtta tcctcatgaa gtatatgaca accgacatgg
      181 gtatccaccg ccagggcctc catcccgggc ccctagacct atgccccctc atcctgcaat
      241 gctggaagaa gaacttgaaa tgcaacatca tgaaatccgg aggcttttgg atgaaaatag
      301 gaggctagtt gaagatcgaa ttgctctgca gcgagagttg ggtgctgcac gagaggaact
      361 tagacgaatg aatatagcca tcgctgatat tgaagcagaa aatgaaatgc attcaagaca
      421 gttaattgaa aatagtatga aactagaagc tgatcttcgt gccgccgaac ctttaaagaa
      481 agaggctgca caactccatg cagaagtcaa acgactaagt tctataagac atgatctttc
      541 tgggaaggtt cagatgttga aaaaagacct cacaaaattg caaatagata acgagcaact
      601 tcctggttta agagctgagc atgagagaat tcatcaggag cttatgcatg ctagggctgc
      661 tattgattat gagaagaaag gaggtctaga gctgatggaa caaagacagt caatggagaa
      721 gaatttggtt tccatggccc gtgaagtaga gaagcttcgt gcagaacttg caagtactga
      781 tgttggatct tggtctgctg gtggatcata tgggatgcag tatggcgttt ctgatggccg
      841 ttttcctcct cagtatggtg atggatatgt tgctcacctg ggtactgctg tcaagggtcc
      901 gctatacggt tcaagctctg caagggctgg gcacgagaac tctcgcatga ctcggcattg
      961 acatgtggat ggcttgtgtc cccctttgca gaaaaacata tcttctacat tttctcaaaa
     1021 atccatgatt ggtggctaga aatgtatggc tctcctgtgt ttgcatttaa ataacaattc
     1081 ttaaggttgt cccagtttta caccagaagc tatctttaac agagggtaac tgacgagatg
     1141 gacgccttcc atgtctatga cctcatcacc tgaataaatt tgccacatca gatctccgag
     1201 tgtacgcatc ttcacgacac attccaaact ttcgggttct tggaaaagct gttcagctcg
     1261 tctagtatgt tcataccaca acgacatacg gtaagcatga atgtctcttc tatttgtttg
     1321 cttactccca tctcttgatt ggtagcatcc tattgcaatt tctgtgtctc tctgcccatc
     1381 catggatcgc tggtttatgt ttgcagatcc tatcagtatg taactatcgt ccactgaaaa
     1441 atacatagta aaacatcctc tgaatttaaa ttagatatgc tatacacccc aaggttttgt
     1501 ggattttcta aggcatatta gttttggaaa tataataatc aggttcatcc tgttccaata
     1561 taaggctaga tacagaaagt ctatttaact attaataaaa taaaacaata gctttttt
//
LOCUS       XR_011757071            1775 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FLX-like 3
            (LOC139839765), transcript variant X6, misc_RNA.
ACCESSION   XR_011757071
VERSION     XR_011757071.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1775
                     /gene="LOC139839765"
                     /note="protein FLX-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839765"
     misc_RNA        1..1775
                     /gene="LOC139839765"
                     /product="protein FLX-like 3, transcript variant X6"
                     /db_xref="GeneID:139839765"
ORIGIN      
        1 acacaattca gttaccgaat gttcgttcgt tctctcacga actacacgca ggtgttatta
       61 aacaagcaaa taacataaac aaatcttcac aatttaatca attccttcac atcatcaagg
      121 gtgatattag atggcaggga gaaaccgtta tcctcatgaa gtatatgaca accgacatgg
      181 gtatccaccg ccagggcctc catcccgggc ccctagacct atgccccctc atcctgcaat
      241 gctggaagaa gaacttgaaa tgcaacatca tgaaatccgg aggcttttgg atgaaaatag
      301 gaggctagtt gaagatcgaa ttgctctgca gcgagagttg ggtgctgcac gagaggaact
      361 tagacgaatg aatatagcca tcgctgatat tgaagcagaa aatgaaatgc attcaagaca
      421 gttaattgaa aatagtatga aactagaagc tgatcttcgt gccgccgaac ctttaaagaa
      481 agaggctgca caactccatg cagaagtcaa acgactaagt tctataagac atgatctttc
      541 tgggaaggtt cagatgttga aaaaagacct cacaaaattg caaatagata acgagcaact
      601 tcctggttta agagctgagc atgagagaat tcatcaggag cttatgcatg ctagggctgc
      661 tattgattat gagaagaaag gaggtctaga gctgatggaa caaagacagt caatggagaa
      721 gaatttggtt tccatggccc gtgaagtaga gaagcttcgt gcagaacttg caagtactga
      781 tgttggatct tggtctgctg gtggatcata tgggatgcag tatggcgttt ctgatggccg
      841 ttttcctcct cagtatggtg atggatatgt tgctcacctg ggtactgctg tcaagggtcc
      901 gctatacggt tcaagctctg caagggctgg gcacgagaac tctcgcatga ctcggcattg
      961 acatgtggat ggcttgtgtc cccctttgca gaaaaacata tcttctacat tttctcaaaa
     1021 atccatgatt ggtggctaga aatcaattct taaggttgtc ccagttttac accagaagct
     1081 atctttaaca gaggcttgac ttttctaaca actgttgggc ctgaatgttg actttcccga
     1141 ggatggtgca tgttgtcttg agggttatcg tgattgttga agttattgga tgagcacaaa
     1201 gaacacataa ggctttccgg ttggattaat gcactgaaaa aggtaaaaca gtcggtaagc
     1261 ttttcatgtc tagtgtcgtt aataaatcct tacttcattc tacattgttc tacattcatg
     1321 catggtttca ttcctattct gtcttcattg atgttttatg caatttttag aaaatagttt
     1381 ctacatgtag actatgaata tgaactgaaa aaatgataat aacaacgttg tgcaccctta
     1441 aaaccatcat tagcgagagg atactcacat taagtagaaa tggtggtgaa taaggtgtgg
     1501 catgaaagat ggtagcttca agtgttccat gaagaaactt tggttttgca tccatcgttt
     1561 aaaaatttgt ttgagctaat tatgtaggat ataccatata taggaatcta gtaaaatttg
     1621 tgttgtgaac taaaatatga aagaaacctt aaaagcaaat atgcattttg agtggaactg
     1681 cagttttagg gaaacttgta aaagtctgga ggttgaatct tagaggcaac catcaaacgt
     1741 aaaatgtttc ttattcttca agtacaaatt tctgt
//
LOCUS       XR_011757072            1587 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FLX-like 3
            (LOC139839765), transcript variant X7, misc_RNA.
ACCESSION   XR_011757072
VERSION     XR_011757072.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1587
                     /gene="LOC139839765"
                     /note="protein FLX-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839765"
     misc_RNA        1..1587
                     /gene="LOC139839765"
                     /product="protein FLX-like 3, transcript variant X7"
                     /db_xref="GeneID:139839765"
ORIGIN      
        1 acacaattca gttaccgaat gttcgttcgt tctctcacga actacacgca ggtgttatta
       61 aacaagcaaa taacataaac aaatcttcac aatttaatca attccttcac atcatcaagg
      121 gtgatattag atggcaggga gaaaccgtta tcctcatgaa gtatatgaca accgacatgg
      181 gtatccaccg ccagggcctc catcccgggc ccctagacct atgccccctc atcctgcaat
      241 gctggaagaa gaacttgaaa tgcaacatca tgaaatccgg aggcttttgg atgaaaatag
      301 gaggctagtt gaagatcgaa ttgctctgca gcgagagttg ggtgctgcac gagaggaact
      361 tagacgaatg aatatagcca tcgctgatat tgaagcagaa aatgaaatgc attcaagaca
      421 gttaattgaa aatagtatga aactagaagc tgatcttcgt gccgccgaac ctttaaagaa
      481 agaggctgca caactccatg cagaagtcaa acgactaagt tctataagac atgatctttc
      541 tgggaaggtt cagatgttga aaaaagacct cacaaaattg caaatagata acgagcaact
      601 tcctggttta agagctgagc atgagagaat tcatcaggag cttatgcatg ctagggctgc
      661 tattgattat gagaagaaag gaggtctaga gctgatggaa caaagacagt caatggagaa
      721 gaatttggtt tccatggccc gtgaagtaga gaagcttcgt gcagaacttg caagtactga
      781 tgttggatct tggtctgctg gtggatcata tgggatgcag tatggcgttt ctgatggccg
      841 ttttcctcct cagtatggtg atggatatgt tgctcacctg ggtactgctg tcaagggtcc
      901 gctatacggt tcaagctctg caagggctgg gcacgagaac tctcgcatga ctcggcattg
      961 acatgtggat ggcttgtgtc cccctttgca gaaaaacata tcttctacat tttctcaaaa
     1021 atccatgatt ggtggctaga aatcaattct taaggttgtc ccagttttac accagaagct
     1081 atctttaaca gagggtaact gacgagatgg acgccttcca tgtctatgac ctcatcacct
     1141 gaataaattt gccacatcag atctccgagt gtacgcatct tcacgacaca ttccaaactt
     1201 tcgggttctt ggaaaagctg ttcagctcgt ctagtatgtt cataccacaa cgacatacgg
     1261 taagcatgaa tgtctcttct atttgtttgc ttactcccat ctcttgattg gtagcatcct
     1321 attgcaattt ctgtgtctct ctgcccatcc atggatcgct ggtttatgtt tgcagatcct
     1381 atcagtatgt aactatcgtc cactgaaaaa tacatagtaa aacatcctct gaatttaaat
     1441 tagatatgct atacacccca aggttttgtg gattttctaa ggcatattag ttttggaaat
     1501 ataataatca ggttcatcct gttccaatat aaggctagat acagaaagtc tatttaacta
     1561 ttaataaaat aaaacaatag ctttttt
//
LOCUS       XM_071829917            2383 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipase D alpha 4
            (LOC139839766), mRNA.
ACCESSION   XM_071829917
VERSION     XM_071829917.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2383
                     /gene="LOC139839766"
                     /note="phospholipase D alpha 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839766"
     CDS             1..2265
                     /gene="LOC139839766"
                     /codon_start=1
                     /product="phospholipase D alpha 4"
                     /protein_id="XP_071686018.1"
                     /db_xref="GeneID:139839766"
                     /translation="MDAKPKFLHGTLEATIFHATPYSPPFLLNCINPTGKPAYVTIKI
                     DHKKIASTSQESSRIWNQTLCVLCAHPITSTITITLKTTCTILGKVNIQAQQLLEKSS
                     LIDGLFPVCMENGKPHPDIKIRFMLWFKPAEIEKSWQKMIDNNEFNGLRDATFQQRSN
                     CSVTLYQDSHHNLTFQPPSNICGSPRKLWEDIFLAIEDAKHLIYIAGWSFNPNVILVR
                     GSETDIPHAKGIKLGDLLKRKAEEGVPVRIIIWDDETSLPILKNKGLMKTNDENAFAY
                     FKNTKVICRLCPRLNHSFPTLFTHHQKTITVDTRGYSSSSKREIISFIGGIDLCDGRY
                     DTEQHSLFKNLNTEQQAHDFYQTSISGASVTKGGPREPWHDAHASVTGEAARDIMHNF
                     EQRWVKQFDPALLVSVDTITDLANTSTQTERDWNVQVFRSIDHESISHPQNNFIERSI
                     YEAYVEAIRRAEKFIYIENQYFIGGYHLWEKDQHSGCRNLIPIEIALKVVNKIKAKER
                     FAVYILIPMWPEGSPESESVQDILHWTRETMKMMYGLIGDALRDSGENWHPKDYLNFF
                     CLANREEKKKGEYVPPHSPHHATQYWNAQKHRRFMVYVHAKLMIVDDSYILIGSANIN
                     QRSMDGQRDTEIAIGCYQSRDGSKQTNRRDIHAYRMSLWYEHTRRAEQLFQEPESLEC
                     VVKMRTLGDLMWQIYSGDEVIDMEGVHLVSYPVSVTREGKVEDHVDSGGLFPDTKAQV
                     KGKRSKVLPPICTT"
     misc_feature    1..2262
                     /gene="LOC139839766"
                     /note="phospholipase D epsilon; Region: PLN02352"
                     /db_xref="CDD:215202"
ORIGIN      
        1 atggatgcaa aaccaaagtt tcttcatgga acacttgaag ctaccatctt tcatgccaca
       61 ccttattcac caccatttct acttaattgc attaatccaa ccggaaagcc tgcatatgtt
      121 accatcaaga tagatcataa gaagatagca tcgactagtc aagaaagtag cagaatttgg
      181 aaccagacct tatgtgttct ttgtgctcat ccaataactt caacaatcac gataaccctc
      241 aagacaacat gcaccatcct cgggaaagtc aacattcagg cccaacagtt gttagaaaag
      301 tcaagcctga ttgacgggtt gtttccggtg tgtatggaaa acgggaagcc acatccagat
      361 attaaaatca gattcatgtt gtggttcaaa ccagcagaaa tagaaaaaag ttggcaaaag
      421 atgattgaca acaatgaatt caatggacta agagacgcta catttcaaca aaggagtaac
      481 tgcagtgtca cattgtatca agactcgcat cataatctaa cgttccaacc accttctaat
      541 atatgtggat caccaagaaa actttgggag gacattttcc tagccattga ggatgctaaa
      601 catttgattt atattgccgg atggtctttt aatccaaatg tgatactggt caggggttct
      661 gaaacagaca ttccacatgc taaaggtata aagctgggtg atcttctaaa aaggaaagca
      721 gaagaaggtg taccagttag aataataatt tgggatgacg aaacttcatt accgatactc
      781 aaaaacaaag gactaatgaa aaccaacgac gaaaacgcct tcgcctattt caaaaataca
      841 aaagttatat gccgattatg cccaagatta aaccacagct tcccaacact gttcacacac
      901 catcagaaaa ccatcacagt tgacacccgt ggatactcgt cctcaagcaa acgagaaata
      961 attagcttta ttggcggtat agatctatgt gacggccgat acgatacaga acaacattcg
     1021 ctctttaaaa acctaaatac agaacagcag gcacatgatt tctaccaaac aagtatatct
     1081 ggagcaagtg taacaaaagg tgggcccaga gaaccatggc acgatgcaca tgcgagtgta
     1141 acaggagaag cagctcgcga tataatgcac aatttcgagc agcgatgggt caaacagttt
     1201 gaccctgctc tactagtttc tgttgacaca ataacagatc ttgcaaatac gagcactcaa
     1261 acggaacggg attggaatgt tcaagttttt aggtcgattg accatgagtc gatcagccac
     1321 ccgcagaata attttattga aagaagcata tatgaagcgt atgtagaagc aataagacgt
     1381 gctgaaaagt ttatatacat tgagaatcaa tattttattg ggggatatca tttatgggaa
     1441 aaagatcagc attcgggatg taggaatttg ataccgattg agattgcact caaggtagtg
     1501 aataagatta aagcaaaaga gcggtttgca gtgtatatat tgatacctat gtggccagaa
     1561 ggtagtccag agagtgaatc ggtacaagat atattgcatt ggacacggga aacgatgaag
     1621 atgatgtacg gtttaattgg agatgcacta cgagatagtg gtgagaactg gcatccaaaa
     1681 gattacttaa atttcttctg cttagctaac agggaagaaa aaaagaaagg agagtacgtt
     1741 cctcctcatt cacctcatca cgcgacacaa tactggaatg ctcaaaagca taggcgattt
     1801 atggtttatg tgcatgcaaa actcatgata gtggacgata gttacatact gataggatct
     1861 gcaaacataa accagcgatc catggatggg cagagagaca cagaaattgc aataggatgc
     1921 taccaatcaa gagatgggag taagcaaaca aatagaagag acattcatgc ttaccgtatg
     1981 tcgttgtggt atgaacatac tagacgagct gaacagcttt tccaagaacc cgaaagtttg
     2041 gaatgtgtcg tgaagatgcg tacactcgga gatctgatgt ggcaaattta ttcaggtgat
     2101 gaggtcatag acatggaagg cgtccatctc gtcagttacc ctgtgagtgt gacacgcgaa
     2161 ggtaaagtcg aggaccatgt ggatagtggg ggtctatttc ccgatacaaa ggcacaagta
     2221 aaggggaaac ggtctaaagt tctaccacca atatgtacta catagaagat gctataaata
     2281 attcactagt ggtcttgtat gaatagctgt atacatctgt acatagcatc aggataccat
     2341 ttgttttact ttcattaatt ctcaatacca acctaacctt aaa
//
LOCUS       XR_011757073            2722 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839767), transcript variant X1, ncRNA.
ACCESSION   XR_011757073
VERSION     XR_011757073.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2722
                     /gene="LOC139839767"
                     /note="uncharacterized LOC139839767; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839767"
     ncRNA           1..2722
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839767"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839767"
ORIGIN      
        1 tctctttcat tcacgatttt ttatcattaa aaaaaactag ctttcttccc caaattgttt
       61 atcatgctaa aaccgatgtt attgaagatc aatcaattgc catattacgc tacataaatt
      121 aacttccaat ccctataatc gatcatcgat tgttgaagat taaggttttc cagtaaccat
      181 ctcaatgtag tgcatcagcg ttgtcaaaag aatttgcaca taatgaaatt ctatcgccac
      241 catattacat gaaaccggct gcttcggata atcacaaggg tgttgcatat tgatatagtg
      301 gcattggaat ttcatagaag tgcaattaat atagataaat catgttaatc tatctaccca
      361 tctgttcatt ataaattgaa tcattatcga catgattgca ctttttgagt tctataaata
      421 tttcgacttt catacaattt atattcatat tcatattttt tattcaatta ccatatagta
      481 tcctttatat tagctagatt aatccttata tgttttcttt tacagtttca tctaatcgtt
      541 tatacctaat gtaaaaagtc aactactcct cccctttaga gatggcaccg gtgagtagta
      601 ggcgcatatc cactagatcc atcacccgta accgttgtcg ccctcacagc tcttcgacaa
      661 tattcacgtg gcaatgtttt gactggatgg ttctatacag gtccacaccc atatttcccg
      721 acgttacaat tctagagaac tctgttttgg aaattgtgtt tgcctttagg attgaaatca
      781 atcagggttt agtataatgt ttgcctaagg tctgaagttg ctttgctgtc aattacataa
      841 tatgtggcaa aatggactgc gcatacatgt ttataatggg tcatatttgt attcatgttt
      901 aattttattt tgtatatagt cttaaatata tttgttgtgg gtttgtattt caattcatac
      961 atggagcatt attaagtgca atcaatgtgg gttggaattc gatctggttg gatcgcccct
     1021 caaagacatt tcaaccgctt gtttgaaata agttggtaaa tcatatgcta gaatttagta
     1081 caagaggctc tggacttcaa tctaccactt atgagcaaag gttggtctgt gaccatagtt
     1141 cgaaaggtat ttataattgc atttttatta tctctgccaa gccatattga cactcctgct
     1201 atggttggtt tctacatggg atgtactcag gtttgtgatt atatttaaat acacgattct
     1261 catttatatt tatattctac atcaaaacgt tgtgatgatg tactttcttg aaacgtaatt
     1321 tgctatagat ggcaaggcgg gtgggttggg taacgggttg aaggttcagt ttaatatgtt
     1381 taaatttggt gtgggtcaaa atgggtgaat tctttgatca gaaacacttc tcttacaaaa
     1441 cttatttttt gtataaatca ttagtgtgtt aaatatgatc acaaaaatta ctttcaacaa
     1501 aaattttgag tgctaagaga tcgcctcttt ctaatatagt tagtgcttaa acctacaatc
     1561 gtacatatgc atatatgctt tcgttatata ctaaacgact caatacttca atagtttaat
     1621 ttgtccacat attgatgtta atttgggact acacgaatat tgcacgaaca cgtacccaag
     1681 aaatgaacct gagaaaccaa ttaaaccgag gggtcgccca caccatcgta accattgatt
     1741 tgagcttggc ggacactgtg caagtttttt tattgtatgc ttatatatga atattggtag
     1801 cttcaatttg tttcacttaa attttgtaac tcatgttgta taaagtgggt aagtttgagc
     1861 catgacctat taggataaag tgggtaagtt tgactcatga cctatgtggt tatatgggag
     1921 tcttatgact caaacccagt tccttccagg tttacatcag ttaggtcata ggtgatcaaa
     1981 agtccaagcc cttacctttg cctataccga agatattagt tcaaaggcca aaaagaagag
     2041 caaaaacagg tctttaactt atgacagttg attagtcact ttaggagtca atgtgggaca
     2101 ggtttggaat cctacttaaa gaattgggga tttccatgct tctttatata ctacttcttt
     2161 accaggtacc gagtgcaagc tattgttttc gactattatt gaaatatttt agtaaaactt
     2221 tagtaataaa acttttattc gtagatgata atttcaactc tgacggatat ggttttcttt
     2281 gaggacaaca gaacaatcaa ccccaacttt ttttgggtac gtgggtgtac caattgtaaa
     2341 tgtgagttac attttctttg tatatcttca atatacgtgg tctaaatcta taaaatcatt
     2401 ggatagttat tgtttatttg tttattttta tattttattt gtgatacgta ttgttgtatg
     2461 acgggttgga gatatatgga ttggagtcta tgtattaaga ttagcaatgt tgaatatgtt
     2521 aaaacgggtg gattggaaga cttgaggacc caaggacttg gagatttgaa gagttggaca
     2581 tttgagacat caaggttaac gtattagaaa attatatgtg caattgaaat gttttgttgt
     2641 tgtttagaat aactcataaa tatggtcgta ccatagacat tcaaatctga actatgcaca
     2701 cggaccatgt ttttttttct tt
//
LOCUS       XR_011757074            2731 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839767), transcript variant X2, ncRNA.
ACCESSION   XR_011757074
VERSION     XR_011757074.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2731
                     /gene="LOC139839767"
                     /note="uncharacterized LOC139839767; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839767"
     ncRNA           1..2731
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839767"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839767"
ORIGIN      
        1 tctctttcat tcacgatttt ttatcattaa aaaaaactag ctttcttccc caaattgttt
       61 atcatgctaa aaccgatgtt attgaagatc aatcaattgc catattacgc tacataaatt
      121 aacttccaat ccctataatc gatcatcgat tgttgaagat taagatttaa taggttttcc
      181 agtaaccatc tcaatgtagt gcatcagcgt tgtcaaaaga atttgcacat aatgaaattc
      241 tatcgccacc atattacatg aaaccggctg cttcggataa tcacaagggt gttgcatatt
      301 gatatagtgg cattggaatt tcatagaagt gcaattaata tagataaatc atgttaatct
      361 atctacccat ctgttcatta taaattgaat cattatcgac atgattgcac tttttgagtt
      421 ctataaatat ttcgactttc atacaattta tattcatatt catatttttt attcaattac
      481 catatagtat cctttatatt agctagatta atccttatat gttttctttt acagtttcat
      541 ctaatcgttt atacctaatg taaaaagtca actactcctc ccctttagag atggcaccgg
      601 tgagtagtag gcgcatatcc actagatcca tcacccgtaa ccgttgtcgc cctcacagct
      661 cttcgacaat attcacgtgg caatgttttg actggatggt tctatacagg tccacaccca
      721 tatttcccga cgttacaatt ctagagaact ctgttttgga aattgtgttt gcctttagga
      781 ttgaaatcaa tcagggttta gtataatgtt tgcctaaggt ctgaagttgc tttgctgtca
      841 attacataat atgtggcaaa atggactgcg catacatgtt tataatgggt catatttgta
      901 ttcatgttta attttatttt gtatatagtc ttaaatatat ttgttgtggg tttgtatttc
      961 aattcataca tggagcatta ttaagtgcaa tcaatgtggg ttggaattcg atctggttgg
     1021 atcgcccctc aaagacattt caaccgcttg tttgaaataa gttggtaaat catatgctag
     1081 aatttagtac aagaggctct ggacttcaat ctaccactta tgagcaaagg ttggtctgtg
     1141 accatagttc gaaaggtatt tataattgca tttttattat ctctgccaag ccatattgac
     1201 actcctgcta tggttggttt ctacatggga tgtactcagg tttgtgatta tatttaaata
     1261 cacgattctc atttatattt atattctaca tcaaaacgtt gtgatgatgt actttcttga
     1321 aacgtaattt gctatagatg gcaaggcggg tgggttgggt aacgggttga aggttcagtt
     1381 taatatgttt aaatttggtg tgggtcaaaa tgggtgaatt ctttgatcag aaacacttct
     1441 cttacaaaac ttattttttg tataaatcat tagtgtgtta aatatgatca caaaaattac
     1501 tttcaacaaa aattttgagt gctaagagat cgcctctttc taatatagtt agtgcttaaa
     1561 cctacaatcg tacatatgca tatatgcttt cgttatatac taaacgactc aatacttcaa
     1621 tagtttaatt tgtccacata ttgatgttaa tttgggacta cacgaatatt gcacgaacac
     1681 gtacccaaga aatgaacctg agaaaccaat taaaccgagg ggtcgcccac accatcgtaa
     1741 ccattgattt gagcttggcg gacactgtgc aagttttttt attgtatgct tatatatgaa
     1801 tattggtagc ttcaatttgt ttcacttaaa ttttgtaact catgttgtat aaagtgggta
     1861 agtttgagcc atgacctatt aggataaagt gggtaagttt gactcatgac ctatgtggtt
     1921 atatgggagt cttatgactc aaacccagtt ccttccaggt ttacatcagt taggtcatag
     1981 gtgatcaaaa gtccaagccc ttacctttgc ctataccgaa gatattagtt caaaggccaa
     2041 aaagaagagc aaaaacaggt ctttaactta tgacagttga ttagtcactt taggagtcaa
     2101 tgtgggacag gtttggaatc ctacttaaag aattggggat ttccatgctt ctttatatac
     2161 tacttcttta ccaggtaccg agtgcaagct attgttttcg actattattg aaatatttta
     2221 gtaaaacttt agtaataaaa cttttattcg tagatgataa tttcaactct gacggatatg
     2281 gttttctttg aggacaacag aacaatcaac cccaactttt tttgggtacg tgggtgtacc
     2341 aattgtaaat gtgagttaca ttttctttgt atatcttcaa tatacgtggt ctaaatctat
     2401 aaaatcattg gatagttatt gtttatttgt ttatttttat attttatttg tgatacgtat
     2461 tgttgtatga cgggttggag atatatggat tggagtctat gtattaagat tagcaatgtt
     2521 gaatatgtta aaacgggtgg attggaagac ttgaggaccc aaggacttgg agatttgaag
     2581 agttggacat ttgagacatc aaggttaacg tattagaaaa ttatatgtgc aattgaaatg
     2641 ttttgttgtt gtttagaata actcataaat atggtcgtac catagacatt caaatctgaa
     2701 ctatgcacac ggaccatgtt tttttttctt t
//
LOCUS       XR_011757075            2687 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839767), transcript variant X3, ncRNA.
ACCESSION   XR_011757075
VERSION     XR_011757075.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2687
                     /gene="LOC139839767"
                     /note="uncharacterized LOC139839767; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839767"
     ncRNA           1..2687
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839767"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839767"
ORIGIN      
        1 cagaaatcat tcgtactatt tgttaaccca tgttagttgt ataacattaa ttttaaatac
       61 gtgttctatt gcgggaacca ataaggttat gattcatgat gagtaactaa ctctgcatat
      121 tttcattttt atcatgttta ggtgcagctg acttaatata tatatttttt aatttgttta
      181 gaagaatgcg atttcgttct aattcaaggt gttgaaatat atattatatt attgactgac
      241 aatatttttg cagaatttgc acataatgaa attctatcgc caccatatta catgaaaccg
      301 gctgcttcgg ataatcacaa gggtgttgca tattgatata gtggcattgg aatttcatag
      361 aagtgcaatt aatatagata aatcatgtta atctatctac ccatctgttc attataaatt
      421 gaatcattat cgacatgatt gcactttttg agttctataa atatttcgac tttcatacaa
      481 tttatattca tattcatatt ttttattcaa ttaccatata gtatccttta tattagctag
      541 attaatcctt atatgttttc ttttacagtt tcatctaatc gtttatacct aatgtaaaaa
      601 gtcaactact cctccccttt agagatggca ccggtgagta gtaggcgcat atccactaga
      661 tccatcaccc gtaaccgttg tcgccctcac agctcttcga caatattcac gtggcaatgt
      721 tttgactgga tggttctata caggtccaca cccatatttc ccgacgttac aattctagag
      781 aactctgttt tggaaattgt gtttgccttt aggattgaaa tcaatcaggg tttagtataa
      841 tgtttgccta aggtctgaag ttgctttgct gtcaattaca taatatgtgg caaaatggac
      901 tgcgcataca tgtttataat gggtcatatt tgtattcatg tttaatttta ttttgtatat
      961 agtcttaaat atatttgttg tgggtttgta tttcaattca tacatggagc attattaagt
     1021 gcaatcaatg tgggttggaa ttcgatctgg ttggatcgcc cctcaaagac atttcaaccg
     1081 cttgtttgaa ataagttggt aaatcatatg ctagaattta gtacaagagg ctctggactt
     1141 caatctacca cttatgagca aaggttggtc tgtgaccata gttcgaaagg tatttataat
     1201 tgcattttta ttatctctgc caagccatat tgacactcct gctatggttg gtttctacat
     1261 gggatgtact caggtttgtg attatattta aatacacgat tctcatttat atttatattc
     1321 tacatcaaaa cgttgtgatg atgtactttc ttgaaacgta atttgctata gatggcaagg
     1381 cgggtgggtt gggtaacggg ttgaaggttc agtttaatat gtttaaattt ggtgtgggtc
     1441 aaaatgggtg aattctttga tcagaaacac ttctcttaca aaacttattt tttgtataaa
     1501 tcattagtgt gttaaatatg atcacaaaaa ttactttcaa caaaaatttt gagtgctaag
     1561 agatcgcctc tttctaatat agttagtgct taaacctaca atcgtacata tgcatatatg
     1621 ctttcgttat atactaaacg actcaatact tcaatagttt aatttgtcca catattgatg
     1681 ttaatttggg actacacgaa tattgcacga acacgtaccc aagaaatgaa cctgagaaac
     1741 caattaaacc gaggggtcgc ccacaccatc gtaaccattg atttgagctt ggcggacact
     1801 gtgcaagttt ttttattgta tgcttatata tgaatattgg tagcttcaat ttgtttcact
     1861 taaattttgt aactcatgtt gtataaagtg ggtaagtttg agccatgacc tattaggata
     1921 aagtgggtaa gtttgactca tgacctatgt ggttatatgg gagtcttatg actcaaaccc
     1981 agttccttcc aggtttacat cagttaggtc ataggtgatc aaaagtccaa gcccttacct
     2041 ttgcctatac cgaagatatt agttcaaagg ccaaaaagaa gagcaaaaac aggtctttaa
     2101 cttatgacag ttgattagtc actttaggag tcaatgtggg acaggtttgg aatcctactt
     2161 aaagaattgg ggatttccat gcttctttat atactacttc tttaccagat gataatttca
     2221 actctgacgg atatggtttt ctttgaggac aacagaacaa tcaaccccaa ctttttttgg
     2281 gtacgtgggt gtaccaattg taaatgtgag ttacattttc tttgtatatc ttcaatatac
     2341 gtggtctaaa tctataaaat cattggatag ttattgttta tttgtttatt tttatatttt
     2401 atttgtgata cgtattgttg tatgacgggt tggagatata tggattggag tctatgtatt
     2461 aagattagca atgttgaata tgttaaaacg ggtggattgg aagacttgag gacccaagga
     2521 cttggagatt tgaagagttg gacatttgag acatcaaggt taacgtatta gaaaattata
     2581 tgtgcaattg aaatgttttg ttgttgttta gaataactca taaatatggt cgtaccatag
     2641 acattcaaat ctgaactatg cacacggacc atgttttttt ttctttt
//
LOCUS       XR_011757076            2416 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839767), transcript variant X4, ncRNA.
ACCESSION   XR_011757076
VERSION     XR_011757076.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2416
                     /gene="LOC139839767"
                     /note="uncharacterized LOC139839767; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839767"
     ncRNA           1..2416
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839767"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839767"
ORIGIN      
        1 tctctttcat tcacgatttt ttatcattaa aaaaaactag ctttcttccc caaattgttt
       61 atcatgctaa aaccgatgtt attgaagatc aatcaattgc catattacgc tacataaatt
      121 aacttccaat ccctataatc gatcatcgat tgttgaagat taagatttaa taggttttcc
      181 agtaaccatc tcaatgtagt gcatcagcgt tgtcaaaagt ttcatctaat cgtttatacc
      241 taatgtaaaa agtcaactac tcctcccctt tagagatggc accggtgagt agtaggcgca
      301 tatccactag atccatcacc cgtaaccgtt gtcgccctca cagctcttcg acaatattca
      361 cgtggcaatg ttttgactgg atggttctat acaggtccac acccatattt cccgacgtta
      421 caattctaga gaactctgtt ttggaaattg tgtttgcctt taggattgaa atcaatcagg
      481 gtttagtata atgtttgcct aaggtctgaa gttgctttgc tgtcaattac ataatatgtg
      541 gcaaaatgga ctgcgcatac atgtttataa tgggtcatat ttgtattcat gtttaatttt
      601 attttgtata tagtcttaaa tatatttgtt gtgggtttgt atttcaattc atacatggag
      661 cattattaag tgcaatcaat gtgggttgga attcgatctg gttggatcgc ccctcaaaga
      721 catttcaacc gcttgtttga aataagttgg taaatcatat gctagaattt agtacaagag
      781 gctctggact tcaatctacc acttatgagc aaaggttggt ctgtgaccat agttcgaaag
      841 gtatttataa ttgcattttt attatctctg ccaagccata ttgacactcc tgctatggtt
      901 ggtttctaca tgggatgtac tcaggtttgt gattatattt aaatacacga ttctcattta
      961 tatttatatt ctacatcaaa acgttgtgat gatgtacttt cttgaaacgt aatttgctat
     1021 agatggcaag gcgggtgggt tgggtaacgg gttgaaggtt cagtttaata tgtttaaatt
     1081 tggtgtgggt caaaatgggt gaattctttg atcagaaaca cttctcttac aaaacttatt
     1141 ttttgtataa atcattagtg tgttaaatat gatcacaaaa attactttca acaaaaattt
     1201 tgagtgctaa gagatcgcct ctttctaata tagttagtgc ttaaacctac aatcgtacat
     1261 atgcatatat gctttcgtta tatactaaac gactcaatac ttcaatagtt taatttgtcc
     1321 acatattgat gttaatttgg gactacacga atattgcacg aacacgtacc caagaaatga
     1381 acctgagaaa ccaattaaac cgaggggtcg cccacaccat cgtaaccatt gatttgagct
     1441 tggcggacac tgtgcaagtt tttttattgt atgcttatat atgaatattg gtagcttcaa
     1501 tttgtttcac ttaaattttg taactcatgt tgtataaagt gggtaagttt gagccatgac
     1561 ctattaggat aaagtgggta agtttgactc atgacctatg tggttatatg ggagtcttat
     1621 gactcaaacc cagttccttc caggtttaca tcagttaggt cataggtgat caaaagtcca
     1681 agcccttacc tttgcctata ccgaagatat tagttcaaag gccaaaaaga agagcaaaaa
     1741 caggtcttta acttatgaca gttgattagt cactttagga gtcaatgtgg gacaggtttg
     1801 gaatcctact taaagaattg gggatttcca tgcttcttta tatactactt ctttaccagg
     1861 taccgagtgc aagctattgt tttcgactat tattgaaata ttttagtaaa actttagtaa
     1921 taaaactttt attcgtagat gataatttca actctgacgg atatggtttt ctttgaggac
     1981 aacagaacaa tcaaccccaa ctttttttgg gtacgtgggt gtaccaattg taaatgtgag
     2041 ttacattttc tttgtatatc ttcaatatac gtggtctaaa tctataaaat cattggatag
     2101 ttattgttta tttgtttatt tttatatttt atttgtgata cgtattgttg tatgacgggt
     2161 tggagatata tggattggag tctatgtatt aagattagca atgttgaata tgttaaaacg
     2221 ggtggattgg aagacttgag gacccaagga cttggagatt tgaagagttg gacatttgag
     2281 acatcaaggt taacgtatta gaaaattata tgtgcaattg aaatgttttg ttgttgttta
     2341 gaataactca taaatatggt cgtaccatag acattcaaat ctgaactatg cacacggacc
     2401 atgttttttt ttcttt
//
LOCUS       XR_011757077            2407 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839767), transcript variant X5, ncRNA.
ACCESSION   XR_011757077
VERSION     XR_011757077.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2407
                     /gene="LOC139839767"
                     /note="uncharacterized LOC139839767; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839767"
     ncRNA           1..2407
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839767"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839767"
ORIGIN      
        1 tctctttcat tcacgatttt ttatcattaa aaaaaactag ctttcttccc caaattgttt
       61 atcatgctaa aaccgatgtt attgaagatc aatcaattgc catattacgc tacataaatt
      121 aacttccaat ccctataatc gatcatcgat tgttgaagat taaggttttc cagtaaccat
      181 ctcaatgtag tgcatcagcg ttgtcaaaag tttcatctaa tcgtttatac ctaatgtaaa
      241 aagtcaacta ctcctcccct ttagagatgg caccggtgag tagtaggcgc atatccacta
      301 gatccatcac ccgtaaccgt tgtcgccctc acagctcttc gacaatattc acgtggcaat
      361 gttttgactg gatggttcta tacaggtcca cacccatatt tcccgacgtt acaattctag
      421 agaactctgt tttggaaatt gtgtttgcct ttaggattga aatcaatcag ggtttagtat
      481 aatgtttgcc taaggtctga agttgctttg ctgtcaatta cataatatgt ggcaaaatgg
      541 actgcgcata catgtttata atgggtcata tttgtattca tgtttaattt tattttgtat
      601 atagtcttaa atatatttgt tgtgggtttg tatttcaatt catacatgga gcattattaa
      661 gtgcaatcaa tgtgggttgg aattcgatct ggttggatcg cccctcaaag acatttcaac
      721 cgcttgtttg aaataagttg gtaaatcata tgctagaatt tagtacaaga ggctctggac
      781 ttcaatctac cacttatgag caaaggttgg tctgtgacca tagttcgaaa ggtatttata
      841 attgcatttt tattatctct gccaagccat attgacactc ctgctatggt tggtttctac
      901 atgggatgta ctcaggtttg tgattatatt taaatacacg attctcattt atatttatat
      961 tctacatcaa aacgttgtga tgatgtactt tcttgaaacg taatttgcta tagatggcaa
     1021 ggcgggtggg ttgggtaacg ggttgaaggt tcagtttaat atgtttaaat ttggtgtggg
     1081 tcaaaatggg tgaattcttt gatcagaaac acttctctta caaaacttat tttttgtata
     1141 aatcattagt gtgttaaata tgatcacaaa aattactttc aacaaaaatt ttgagtgcta
     1201 agagatcgcc tctttctaat atagttagtg cttaaaccta caatcgtaca tatgcatata
     1261 tgctttcgtt atatactaaa cgactcaata cttcaatagt ttaatttgtc cacatattga
     1321 tgttaatttg ggactacacg aatattgcac gaacacgtac ccaagaaatg aacctgagaa
     1381 accaattaaa ccgaggggtc gcccacacca tcgtaaccat tgatttgagc ttggcggaca
     1441 ctgtgcaagt ttttttattg tatgcttata tatgaatatt ggtagcttca atttgtttca
     1501 cttaaatttt gtaactcatg ttgtataaag tgggtaagtt tgagccatga cctattagga
     1561 taaagtgggt aagtttgact catgacctat gtggttatat gggagtctta tgactcaaac
     1621 ccagttcctt ccaggtttac atcagttagg tcataggtga tcaaaagtcc aagcccttac
     1681 ctttgcctat accgaagata ttagttcaaa ggccaaaaag aagagcaaaa acaggtcttt
     1741 aacttatgac agttgattag tcactttagg agtcaatgtg ggacaggttt ggaatcctac
     1801 ttaaagaatt ggggatttcc atgcttcttt atatactact tctttaccag gtaccgagtg
     1861 caagctattg ttttcgacta ttattgaaat attttagtaa aactttagta ataaaacttt
     1921 tattcgtaga tgataatttc aactctgacg gatatggttt tctttgagga caacagaaca
     1981 atcaacccca actttttttg ggtacgtggg tgtaccaatt gtaaatgtga gttacatttt
     2041 ctttgtatat cttcaatata cgtggtctaa atctataaaa tcattggata gttattgttt
     2101 atttgtttat ttttatattt tatttgtgat acgtattgtt gtatgacggg ttggagatat
     2161 atggattgga gtctatgtat taagattagc aatgttgaat atgttaaaac gggtggattg
     2221 gaagacttga ggacccaagg acttggagat ttgaagagtt ggacatttga gacatcaagg
     2281 ttaacgtatt agaaaattat atgtgcaatt gaaatgtttt gttgttgttt agaataactc
     2341 ataaatatgg tcgtaccata gacattcaaa tctgaactat gcacacggac catgtttttt
     2401 tttcttt
//
LOCUS       XM_071829918            1483 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At1g80640 (LOC139839768), mRNA.
ACCESSION   XM_071829918
VERSION     XM_071829918.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1483
                     /gene="LOC139839768"
                     /note="probable receptor-like protein kinase At1g80640;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 28 Proteins"
                     /db_xref="GeneID:139839768"
     CDS             65..1330
                     /gene="LOC139839768"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At1g80640"
                     /protein_id="XP_071686019.1"
                     /db_xref="GeneID:139839768"
                     /translation="MTDPPLSSMADPVLPTEKKPTFSQFPTENQAQTPGGLEIRVVHH
                     EDLNKRILVALIVASTLLVAILLFLSCLWIFRLKRSKTSDMNKAQQSQDASKGLSLGP
                     ILDKFNPLRMAGKKGSVTVIEYEWLVSATNNFHEDNIIGHGAFGSVYKACFNDHFLAA
                     VKRIHGGGPDAVRGFENEINCLSRVQHQNIVNLLGYCIHGETRFLVYEMMHNGSLESQ
                     LHGRSHGTGLSWQHRMKIALDIARGLEYLHERCTPPVIHRYLKSSNILLGSNYNAKLS
                     DFGLAITDGIHGKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLIGRKPV
                     EKMSPSKCQSIVTWAMPQLTDRSKLPSIVDPVIRDTMDLKHLYQVAAVAVLCVQPEPS
                     YRPLIMDVLHSLIPLVPVELGGSLRATEP"
     misc_feature    482..1285
                     /gene="LOC139839768"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(482..493,500..502,506..508,542..544,548..550,
                     635..637,683..694,839..841,851..856,860..862,890..895)
                     /gene="LOC139839768"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aactcttgtt ttcataacac tgattttggt tccatccata ttttgcattc ccaaattttt
       61 ttctatgaca gaccctcctc tttcttccat ggctgaccct gttcttccta cagagaaaaa
      121 accaacattt tctcagtttc ccactgaaaa ccaagctcaa actcctggag gtttggaaat
      181 tagagtagtt catcatgaag atttgaataa aaggattctt gtagcactca ttgttgcttc
      241 aactttactt gttgcaattt tactgttttt atcatgttta tggattttca gattaaaaag
      301 gtcaaaaaca tctgatatga ataaagccca acaaagtcaa gatgcttcaa aagggttgtc
      361 actgggacca attttggata aatttaaccc attgagaatg gctggtaaaa aggggtcagt
      421 gactgttatc gaatacgaat ggttagtgtc tgcaacaaac aattttcatg aagacaatat
      481 cataggacat ggtgcatttg ggagtgtgta caaagcttgt ttcaatgatc attttcttgc
      541 agctgttaaa agaatccatg gtggaggacc agatgcagtt agaggatttg agaatgagat
      601 aaattgttta agcagagttc aacatcagaa cattgttaat cttttgggtt attgcataca
      661 tggtgagacc aggtttttgg tctatgaaat gatgcataat ggttcactag aatctcaatt
      721 acatgggcgg tctcatggaa ctggtttaag ttggcagcac cgaatgaaaa tcgcacttga
      781 tattgcaaga ggactagagt atcttcatga gcgttgtacc ccacctgtta ttcatagata
      841 tttgaaatcg tcgaacatac ttctaggttc caactacaac gctaaacttt ctgactttgg
      901 actcgctata acggatggga ttcatggcaa gaataacata aagctttcag gaacactagg
      961 ttacgtagct ccagaatacc tcttagatgg taagcttacc gataagagtg atgtttatgc
     1021 gtttggagtt gtacttttag agctgttaat aggaagaaag ccagtagaga aaatgtcacc
     1081 atctaaatgc caatctatcg tcacatgggc aatgcctcag ctaactgaca gatcaaagct
     1141 tccaagcata gttgatcctg tgattagaga tacaatggac ttgaagcact tgtatcaagt
     1201 tgctgctgta gctgtgctat gtgtacaacc agaaccaagt tacaggccat tgataatgga
     1261 tgttttacat tctttgatcc cacttgtacc tgttgagctt ggtgggtcat taagagctac
     1321 agaaccttga ttaatctgtt tttatctata aactagatta ttgtatatgc actacaaatg
     1381 ataaacttat tgagctaatc tttatctttt gcaaaatgtc aagaaaggcc catataattt
     1441 acaaaaattc tcattttaac cactttaatt ttgtcaaatt ata
//
LOCUS       XM_071829919            3189 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839769), mRNA.
ACCESSION   XM_071829919
VERSION     XM_071829919.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3189
                     /gene="LOC139839769"
                     /note="beta-galactosidase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 88
                     Proteins"
                     /db_xref="GeneID:139839769"
     CDS             232..2784
                     /gene="LOC139839769"
                     /codon_start=1
                     /product="beta-galactosidase-like"
                     /protein_id="XP_071686020.1"
                     /db_xref="GeneID:139839769"
                     /translation="MMDIVLKKQGFVKMQKLKLINLMLVVILSNWGCLCTGSVSYDHK
                     AISINGQRKILLSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPQPGQYY
                     FEDRYDLVKFIKLIKQAGLYVHLRVGPYACAEWNFGGFPVWLKYVPGISFRTDNGPFK
                     AAMEKFTRHIVNMMKAERLYETQGGPIILSQIENEYGPMEYEIGAPGRAYTQWAAKMA
                     VGLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKNFKPKMWTEAWTGWFTEFGGA
                     VPYRPAEDLAYSVAKFIQSRGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEFG
                     LKREAKWGHLKDLHRAIKLCEPALVNSDPTIINLGNYQKAYVYNYKAGGCAAFLSNNN
                     RAAYATVNFRNQNYNIPPWSISILPDCKNTVFNTARVGSQTSLMQMKSDGGGFVWQSF
                     IDQTESYDDNAYTTHGLLEQLNITRDSSDYLWYMTDVKVGSNEGFLRSGKWPTLTVFS
                     AGHALHVFINGQLAGTVYGSQKNPKLTFNQPINLRPGLNKISLLSIAVGLPNIGPHFE
                     TWNAGVLGPVTLYGLDEGKRDLTWQKWSYKVGLKGEILSLNSLMGSSSVEWIQGSLVS
                     QKQPLTWYKTNFNAPGGNEPLALDMSSMGKGQIWINGQSIGRYWPAYTARGSCSTCSY
                     AGYFDENKCLSNCGEASQKWYHVPRSWLKPRGNLLVVFEELGGNPYGITLVKRSIYSV
                     CADIYEWQPSLMNYEMQASGKVSKPLRPKAHLSCSPGQKISSIKFASFGTPLGGCGSY
                     QEGGCHAHNSYDAFNKLCVGQNSCTVPVTPEIFGGDPCPKVMKKLSVEAICS"
     misc_feature    286..2781
                     /gene="LOC139839769"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
     polyA_site      3189
                     /gene="LOC139839769"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaacacaaac acacccaccc acacacacac acaacttttt acccacaaaa tactgataat
       61 acagaaacca aaagttcaca agaactataa tattttttta gtataatcca cacatacaca
      121 ttgatttaag acagttttta gtgtgtgttt gtatgtttct tggcatcttt atacatcttt
      181 taagtgaatt taagttaaaa acagaggaaa ttgctctgtt ttgaagggtt tatgatggat
      241 attgtgttaa agaaacaggg gtttgttaaa atgcagaaat taaaattaat aaatttaatg
      301 ttggtggtta ttctgagcaa ttggggttgt ttatgtactg gctcagtttc atatgaccat
      361 aaagctatct ccattaatgg acaaagaaaa attcttcttt ctggatctat tcattatcca
      421 agaagcactc ctgagatgtg gccagatctt attcagaagg ccaaagaagg aggattggat
      481 gtgattcaga cttatgtttt ttggaatggg catgaaccac aacctggtca atattatttt
      541 gaagataggt atgatttggt gaagttcatt aagctaatta agcaagctgg actttatgtt
      601 catctcagag ttggtcctta tgcttgtgct gaatggaact ttggcggttt tcctgtttgg
      661 ttaaaatatg tccctggaat tagtttcaga acagataatg gtccttttaa ggctgctatg
      721 gaaaaattta caaggcacat agtgaatatg atgaaagcag aaagattata tgaaactcaa
      781 ggtggtccaa ttattttatc tcagattgaa aatgagtacg ggccaatgga gtatgaaatt
      841 ggtgcacctg gtcgagccta cacgcagtgg gcagctaaga tggctgtggg tctaggcacc
      901 ggtgttccat gggtcatgtg taaacaagat gatgcccctg acccaattat taacacttgc
      961 aatggttttt actgtgacta tttctcaccc aacaaaaact tcaaaccgaa aatgtggaca
     1021 gaagcatgga caggatggtt tacagagttt ggaggtgcgg ttccttatag accggctgaa
     1081 gacttagcgt attcggtggc taagtttatt caaagtcgtg gatcttttgt caattactat
     1141 atgtaccatg gaggaacaaa ttttgggagg acagcgggtg gcccgttcat cgcaacaagc
     1201 tacgattatg atgctcctct tgatgaattt ggactaaaac gagaagcgaa gtggggccat
     1261 ctgaaagatc tgcatagagc cataaaacta tgtgagcctg ctttagtaaa tagtgatccc
     1321 actattatca atctcggaaa ctatcaaaag gcatatgttt ataattataa agctggaggt
     1381 tgtgctgcct ttttatcaaa taacaacaga gctgcttacg caaccgtaaa tttccgaaac
     1441 cagaattaca atattcctcc ttggtctatc agcatactac ctgactgcaa gaataccgtt
     1501 tttaatacgg caagggttgg ttcacaaact tcgctaatgc aaatgaaatc cgacggggga
     1561 ggatttgttt ggcagtcgtt tatcgatcaa acggaatcgt atgatgataa cgcgtatacg
     1621 acacatgggt tattggagca actcaatatt actagagact cgtcggatta tttgtggtac
     1681 atgacagatg tcaaggtggg gtccaacgag gggttcttaa gaagcgggaa gtggcctacc
     1741 cttacggtct tttccgcagg tcacgctctg catgttttca tcaatggtca actagcagga
     1801 acggtgtatg gaagtcaaaa aaatccgaaa ctaactttca atcaacccat aaatctaaga
     1861 cctggtctga acaagatttc tctactaagc attgctgttg gtctcccgaa tattggtcca
     1921 cattttgaga catggaatgc tggtgttctt ggtcctgtta cactctacgg tctcgatgaa
     1981 ggaaagcgtg acttgacttg gcaaaaatgg tcttataagg tcggacttaa aggtgaaatt
     2041 ctaagtctta actcactcat gggtagctca tctgtcgagt ggattcaagg ctcattggtg
     2101 tctcaaaaac aacccttaac ttggtataag actaatttta atgcaccggg tgggaatgaa
     2161 ccgttggctc tagacatgag cagtatgggg aaaggtcaaa tatggataaa tggtcaaagc
     2221 attggacgtt attggcctgc atacacggcc cgtggatctt gtagtacttg tagttacgct
     2281 ggctattttg atgaaaataa atgcttaagt aactgtggtg aagcatcaca aaaatggtat
     2341 cacgtacctc gatcctggct aaaaccaaga ggaaacttgt tggtggtttt cgaagaattg
     2401 ggaggaaacc cgtatggaat aacattggtt aaaagatcca tttacagtgt gtgtgctgat
     2461 atatacgaat ggcagccttc gttaatgaat tatgagatgc aagcttcagg taaagtcagt
     2521 aaaccgttga ggccaaaagc acatctttcg tgcagtccag gtcagaagat ctcgtcaatc
     2581 aaatttgcta gctttggcac cccgttaggc ggttgtggta gttatcagga gggtggctgc
     2641 catgcacata actcctatga tgcctttaac aagttatgtg ttggacaaaa ttcatgcacg
     2701 gtaccggtaa cacccgagat ttttggaggt gatccttgcc caaaagtaat gaagaagctc
     2761 tcagttgaag ccatttgcag ctgatagata tttataaaac acgagaaaag ggagaaagtt
     2821 tcaagatcta caagtcaatt tggtttgaaa ttatttgcaa gtatttatac cttatttaaa
     2881 attttatacg agcgtatgat gggctttttt accaaaggtg aagttgtaca gatatgcagc
     2941 acaccgttat ggttcagaag tgtcatcctg tagtatataa agttcgcaag cacgcgaatg
     3001 tgattattgg gaaagcacgt tgagattcgt aattgagtcc atgagcttat gctttatttt
     3061 gggtatttaa gtaaaatgca aaagcttctt gcttttgtat tattgcatac tctacacacg
     3121 caatctgtta ttgctatcct gttgtaaaga tattttaaga tatggtaata tttcttcaag
     3181 tttctcaaa
//
LOCUS       XM_071829920            4244 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eIF-2-alpha kinase GCN2
            (LOC139839770), transcript variant X1, mRNA.
ACCESSION   XM_071829920
VERSION     XM_071829920.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4244
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4244
                     /gene="LOC139839770"
                     /note="eIF-2-alpha kinase GCN2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839770"
     CDS             122..3778
                     /gene="LOC139839770"
                     /codon_start=1
                     /product="eIF-2-alpha kinase GCN2 isoform X1"
                     /protein_id="XP_071686021.1"
                     /db_xref="GeneID:139839770"
                     /translation="MGHRSKKKKRGGSGRRRTPHDDHTSIDDVGGELLSEELTALSSI
                     FQEDCDVVSDSPPRIKIKLRPYSRDSCYEDSDVSAILSIRFLPGYPYKCPKLLIISEK
                     GLSKSDADKLLSLVQDQANLNAREGRVMIYNLVEAAQEFLSEVVSSEQPPLSQKTVAV
                     SSERSSKGPFVYGFIDLFIGSGESWHWGISVEENSNTNITVDNLQNGSQPLLEKVNQN
                     MKTGVVEEAKLDKVISSTGKVVILEESSKSSDSRTSPSEESMEDVSIGEDYPLAEDTE
                     EETDYDQIRSDYSESESSTSTNHNQISQTVERDLVLAHLLRLACAPKGPLGDALTDVA
                     SELVNLGIVSERVADLATESSSLFDKSFNQSFKHRTVASKVSQFWKFSSDFEGQHTSP
                     MLNSRYLNDFEELKPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDNSQPLDDRILREV
                     ATLSRLQHQHVVRYYQAWFETGETGSYGDANLGSRTAASSSFSYLDQSSTDVVGQDNK
                     VRTYLYIQMEYCPRTLRQMFESYDHFDKKLTWHWFRQIVEGLAHIHGQGIIHRDLTPN
                     NIFFDARNDIKIGDFGLAKFLKLEQLEQDVDPAETTGVSVDGTGQVGTYFYTAPEIEQ
                     RWPKINEKADMYSLGIVFFELWHPFSTGMERHIVLSELKKMGELPSDWVAEFPEQASL
                     LRKMMSPSPSDRPSTTDLLKHAFPPRMESELVDNILRTMHNSEDPTIYNKVVDAIFNE
                     EILSSKNQDGVLEIPKLVGNNSSSIQHTSLDTEIRDLVWEASAAVFRLHCAKRLEIIP
                     MRLLGDLQQFNRNSVKLLTDGGDLIELCHELRLPFINWVVLQQKSSFKRFEICYVYRR
                     PIGHSPPNRYLQGDFDVIGGASILTEAEVIKAAMDIISQFSHLESCDIHLNHADLLEA
                     IWSWIGIKADHRQKVAELLSLLGSLRPQSSERKTKWVVIRRQLRQELNISEGAVNKLQ
                     TVGLRFCGTADQALPRLRGALPADTPIRKALDELSEIFNYLRIWKIDKQVFIDPLMPP
                     AEGYHRDSFFQIYSRKDNSLGSLTEGILLAVGGRYDYLLHNMWQSEYKSNPPGAVGTS
                     LALETIIQHSAVDIYKPFRSDSSKSVLVCSRGGGGLLEKRMELVSELWNEDIKAEFVP
                     TLDPSLTEQYEYANEHDIKCLIIISDSDVSQKGSVKVRHLELKREKEISRESLIKFLS
                     EAMNSQFRNPSIWN"
     misc_feature    221..550
                     /gene="LOC139839770"
                     /note="RWD domain of RING finger protein 25 (RNF25) and
                     related proteins; Region: RWD_RNF25; cd23818"
                     /db_xref="CDD:467654"
     misc_feature    1307..2233
                     /gene="LOC139839770"
                     /note="Catalytic domain, repeat 2, of the Serine/Threonine
                     kinase, eukaryotic translation Initiation Factor 2-Alpha
                     Kinase 4 or General Control Non-derepressible-2; Region:
                     STKc_EIF2AK4_GCN2_rpt2; cd14046"
                     /db_xref="CDD:270948"
     misc_feature    order(1307..1312,1319..1324,1460..1465,1472..1477,
                     1481..1486,1490..1492,1508..1534,1538..1540,1658..1660,
                     1775..1777,1784..1792)
                     /gene="LOC139839770"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    order(1343..1348,1361..1363,1367..1369,1406..1408,
                     1412..1414,1670..1681,1688..1690,1817..1822,1826..1828,
                     1859..1861,1961..1969,2063..2065,2069..2092)
                     /gene="LOC139839770"
                     /note="active site"
                     /db_xref="CDD:270948"
     misc_feature    order(1343..1348,1367..1369,1406..1408,1412..1414,
                     1505..1507,1670..1681,1805..1807,1811..1813,1820..1822,
                     1826..1828,1859..1861)
                     /gene="LOC139839770"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    order(1856..1885,1904..1927,1934..1969)
                     /gene="LOC139839770"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270948"
     misc_feature    order(1961..1969,2063..2065,2069..2092)
                     /gene="LOC139839770"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    <2441..3709
                     /gene="LOC139839770"
                     /note="Histidyl-tRNA synthetase; Region: PLN02972"
                     /db_xref="CDD:215525"
ORIGIN      
        1 aatccaaaca agctcacctc cctccctctc tctttgctgc tttggttgtt gtagtgactt
       61 gcttcaattg gtatgaatca gtgtctaatt gtattcattc acagctgaaa atcgacgtga
      121 tatgggtcac agatccaaaa agaagaagcg tggtggttca gggagacgta ggacacctca
      181 cgacgatcac acttctattg atgacgtcgg cggcgagctt ctatcagaag agcttaccgc
      241 actgagctct atatttcaag aagattgtga cgttgtttcg gattctccac cccgaattaa
      301 gatcaagcta aggccatact cacgagattc gtgttacgag gattcagatg tttcagctat
      361 tctttcaata aggtttttac ctggatatcc ttacaagtgt cccaagctgc tgataatttc
      421 agaaaaagga ttatcaaaat ctgatgcaga caagttattg tcattggttc aagatcaagc
      481 caatttaaat gcccgagaag gacgtgtgat gatttataac ttggttgagg ctgcacaaga
      541 atttttgtct gaagttgtct catcagagca accaccttta tctcaaaaga ctgttgcagt
      601 ttcaagtgaa aggtcttcca aagggccttt tgtatacggt ttcatagatc ttttcatagg
      661 ctctggggag tcatggcatt ggggaatttc agttgaagaa aacagcaata caaacattac
      721 tgtagataat ctgcaaaatg gtagtcaacc attgttggaa aaagtcaatc aaaatatgaa
      781 gacgggggtg gttgaggagg ctaaactgga taaagtaata agctctacag gaaaagttgt
      841 cattttggaa gaatctagta agagtagtga ttctcgtaca tcaccatctg aggaatcaat
      901 ggaggatgta agcatcggtg aggattatcc tctggcagag gatactgaag aagaaactga
      961 ttatgatcag attagaagtg attattcaga atcagaatca tccacatcaa cgaatcataa
     1021 tcagatttca caaactgttg agagagattt ggttttggct catttgctac gacttgcatg
     1081 tgctcctaaa ggtccacttg gtgatgcctt gactgatgtg gcatcagagc tggttaatct
     1141 agggattgtt tcagagcggg tggcagattt agcaacagaa tcatcatcac tatttgataa
     1201 aagcttcaat caatccttta aacatcgtac ggtagcctca aaggtttctc agttttggaa
     1261 attttcttct gatttcgaag ggcagcatac ctcacctatg ttaaattctc gttatttgaa
     1321 tgactttgag gagctaaaac cgcttggtca tggtgggttc ggccatgttg tgctatgcaa
     1381 gaataagcta gatggaagac agtatgctgt taagaaaatt cgactaaagg acaatagtca
     1441 accattagat gacaggattt taagagaagt agccactctt tcccgattgc agcaccaaca
     1501 tgttgtacgt tactatcagg catggtttga aacaggagaa accgggtcct atggtgatgc
     1561 taacttgggt tccaggactg cagctagctc cagttttagt tacctagacc agagttcaac
     1621 agatgtggtg ggacaggaca acaaagttag aacgtacctc tacattcaaa tggaatattg
     1681 cccaaggact ctccgacaga tgtttgaatc ttatgatcac tttgacaaga agttgacctg
     1741 gcactggttt cgtcaaatag ttgaaggcct ggcacacata catggtcaag gaattatcca
     1801 tcgtgatctg actccaaata atattttctt tgatgctcgc aatgatatta aaatagggga
     1861 ctttggtctc gctaagtttc tgaagttgga gcagttggaa caagacgtag atcctgcaga
     1921 aacaactgga gtgtcggttg atggtactgg tcaggttgga acctattttt atactgcacc
     1981 agaaatcgag cagcgttggc caaaaattaa cgagaaagct gatatgtata gtttgggaat
     2041 tgtattcttt gagctgtggc atccctttag cactggaatg gaacgacaca ttgttctttc
     2101 tgagttaaaa aagatggggg agcttccttc ggattgggtt gctgagtttc ccgaacaggc
     2161 ttcgttattg cgtaagatga tgtcaccaag cccatcagac cgtccatcta ccacagatct
     2221 cctcaaacat gcttttcctc caagaatgga gtctgaattg gtagacaata tcttacgaac
     2281 aatgcacaac tctgaggacc ccaccatcta taataaagtt gtggatgcta tcttcaacga
     2341 ggagatatta agtagtaaaa accaagatgg cgtacttgaa ataccaaaat tagttggaaa
     2401 taactcctca tctatacaac atacaagttt ggatactgaa attcgtgacc tagtttggga
     2461 ggcatctgct gcagtcttta ggttgcattg tgcaaaacgt ttggaaataa ttccaatgcg
     2521 tttgctagga gatcttcaac agtttaatag gaactcggtt aagcttttga cagatggtgg
     2581 agacttgata gaactctgcc acgagctgcg tttacccttt attaattggg tagttctaca
     2641 acagaaatct tctttcaaac gatttgaaat atgctatgta tatcgtagac caattggtca
     2701 ttcccctcca aatcggtatc ttcagggaga ctttgatgta attggaggtg cttctatact
     2761 gacagaggct gaggttatca aggctgccat ggatatcata agtcaatttt cccatctaga
     2821 atcatgtgac atacatctga atcatgctga tttgttagaa gcaatttggt catggattgg
     2881 aattaaggct gaccatagac aaaaagtagc agaacttctg tctcttttgg gttccttgcg
     2941 tccccagtcc tccgagagaa aaacaaagtg ggtggtgata agacggcagc ttagacagga
     3001 acttaatatc agtgaagggg ccgttaataa attgcagact gtgggtttaa ggttttgcgg
     3061 aactgcagat caggctcttc ccagattacg aggtgccctc cctgctgata cacctatacg
     3121 aaaggcactt gatgaactat ctgagatttt taattattta cgtatctgga agattgataa
     3181 gcaagttttc atcgatccac ttatgccacc cgctgagggt tatcacagag attcattttt
     3241 ccagatttat tcgaggaagg ataatagtct tggatcgctt acagaaggaa tcttgcttgc
     3301 cgttggtggt cgctacgatt acctccttca caatatgtgg caatctgaat acaaatcaaa
     3361 tcctccggga gcagttggga ctagtcttgc tttggaaacc atcattcaac attctgctgt
     3421 tgatatttac aaacctttta gaagtgattc cagtaaaagt gttcttgttt gttcaagagg
     3481 tggaggtggt ttactggaga agcgtatgga gttagtttcc gaattgtgga atgaagatat
     3541 caaggcggag tttgtgccga ctttggatcc tagccttaca gaacagtacg agtatgccaa
     3601 cgaacatgac attaaatgtc ttattatcat atcagattcc gatgtttctc aaaaaggatc
     3661 tgttaaggtt cgtcatcttg agcttaaaag ggagaaggaa ataagtcgag aatcactcat
     3721 caaattcttg tcggaagcaa tgaactctca gtttagaaac ccatcaatat ggaattaaac
     3781 aatgaactta gataccacga ttcaccgagt ttactttttt ggtaatcgtc tttacatgct
     3841 tctgatcgaa gttcaaaatt ttgttagttc ggtgaactca atttcaatgg tgaatacaga
     3901 ggttcaagct tgtttttcta tacatgcaca taataggagg ctattaattt gagttatttt
     3961 ggtaagtcgt caacatttgc tcaaaactaa aggaaaaatt aatcctctat gattgaattt
     4021 tcctgccaaa acttgtgttg aaatttcctc tatacttgaa tgcaaaatga tagtcaagag
     4081 tatgaatgta tgattgtcta aaaatttgat tacaattatc tttattacat cctgatgtac
     4141 ataaataata ttcctcgggc ctatatccta ttcatggttt tattacggat gcgagccctg
     4201 atatgttcac gttatgatat ccggaagtgt aaaagagtaa tata
//
LOCUS       XM_071829921            4304 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eIF-2-alpha kinase GCN2
            (LOC139839770), transcript variant X2, mRNA.
ACCESSION   XM_071829921
VERSION     XM_071829921.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4304
                     /gene="LOC139839770"
                     /note="eIF-2-alpha kinase GCN2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839770"
     CDS             194..3838
                     /gene="LOC139839770"
                     /codon_start=1
                     /product="eIF-2-alpha kinase GCN2 isoform X2"
                     /protein_id="XP_071686022.1"
                     /db_xref="GeneID:139839770"
                     /translation="MTSAASFYQKSLPHYVGRKNHNMLVNLSVLIVYFQSRSSIFQED
                     CDVVSDSPPRIKIKLRPYSRDSCYEDSDVSAILSIRFLPGYPYKCPKLLIISEKGLSK
                     SDADKLLSLVQDQANLNAREGRVMIYNLVEAAQEFLSEVVSSEQPPLSQKTVAVSSER
                     SSKGPFVYGFIDLFIGSGESWHWGISVEENSNTNITVDNLQNGSQPLLEKVNQNMKTG
                     VVEEAKLDKVISSTGKVVILEESSKSSDSRTSPSEESMEDVSIGEDYPLAEDTEEETD
                     YDQIRSDYSESESSTSTNHNQISQTVERDLVLAHLLRLACAPKGPLGDALTDVASELV
                     NLGIVSERVADLATESSSLFDKSFNQSFKHRTVASKVSQFWKFSSDFEGQHTSPMLNS
                     RYLNDFEELKPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDNSQPLDDRILREVATLS
                     RLQHQHVVRYYQAWFETGETGSYGDANLGSRTAASSSFSYLDQSSTDVVGQDNKVRTY
                     LYIQMEYCPRTLRQMFESYDHFDKKLTWHWFRQIVEGLAHIHGQGIIHRDLTPNNIFF
                     DARNDIKIGDFGLAKFLKLEQLEQDVDPAETTGVSVDGTGQVGTYFYTAPEIEQRWPK
                     INEKADMYSLGIVFFELWHPFSTGMERHIVLSELKKMGELPSDWVAEFPEQASLLRKM
                     MSPSPSDRPSTTDLLKHAFPPRMESELVDNILRTMHNSEDPTIYNKVVDAIFNEEILS
                     SKNQDGVLEIPKLVGNNSSSIQHTSLDTEIRDLVWEASAAVFRLHCAKRLEIIPMRLL
                     GDLQQFNRNSVKLLTDGGDLIELCHELRLPFINWVVLQQKSSFKRFEICYVYRRPIGH
                     SPPNRYLQGDFDVIGGASILTEAEVIKAAMDIISQFSHLESCDIHLNHADLLEAIWSW
                     IGIKADHRQKVAELLSLLGSLRPQSSERKTKWVVIRRQLRQELNISEGAVNKLQTVGL
                     RFCGTADQALPRLRGALPADTPIRKALDELSEIFNYLRIWKIDKQVFIDPLMPPAEGY
                     HRDSFFQIYSRKDNSLGSLTEGILLAVGGRYDYLLHNMWQSEYKSNPPGAVGTSLALE
                     TIIQHSAVDIYKPFRSDSSKSVLVCSRGGGGLLEKRMELVSELWNEDIKAEFVPTLDP
                     SLTEQYEYANEHDIKCLIIISDSDVSQKGSVKVRHLELKREKEISRESLIKFLSEAMN
                     SQFRNPSIWN"
     misc_feature    305..610
                     /gene="LOC139839770"
                     /note="RWD domain of RING finger protein 25 (RNF25) and
                     related proteins; Region: RWD_RNF25; cd23818"
                     /db_xref="CDD:467654"
     misc_feature    1367..2293
                     /gene="LOC139839770"
                     /note="Catalytic domain, repeat 2, of the Serine/Threonine
                     kinase, eukaryotic translation Initiation Factor 2-Alpha
                     Kinase 4 or General Control Non-derepressible-2; Region:
                     STKc_EIF2AK4_GCN2_rpt2; cd14046"
                     /db_xref="CDD:270948"
     misc_feature    order(1367..1372,1379..1384,1520..1525,1532..1537,
                     1541..1546,1550..1552,1568..1594,1598..1600,1718..1720,
                     1835..1837,1844..1852)
                     /gene="LOC139839770"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    order(1403..1408,1421..1423,1427..1429,1466..1468,
                     1472..1474,1730..1741,1748..1750,1877..1882,1886..1888,
                     1919..1921,2021..2029,2123..2125,2129..2152)
                     /gene="LOC139839770"
                     /note="active site"
                     /db_xref="CDD:270948"
     misc_feature    order(1403..1408,1427..1429,1466..1468,1472..1474,
                     1565..1567,1730..1741,1865..1867,1871..1873,1880..1882,
                     1886..1888,1919..1921)
                     /gene="LOC139839770"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    order(1916..1945,1964..1987,1994..2029)
                     /gene="LOC139839770"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270948"
     misc_feature    order(2021..2029,2123..2125,2129..2152)
                     /gene="LOC139839770"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    <2501..3769
                     /gene="LOC139839770"
                     /note="Histidyl-tRNA synthetase; Region: PLN02972"
                     /db_xref="CDD:215525"
ORIGIN      
        1 acaagctcac ctccctccct ctctctttgc tgctttggtt gttgtagtga cttgcttcaa
       61 ttggtatgaa tcagtgtcta attgtattca ttcacagctg aaaatcgacg tgatatgggt
      121 cacagatcca aaaagaagaa gcgtggtggt tcagggagac gtaggacacc tcacgacgat
      181 cacacttcta ttgatgacgt cggcggcgag cttctatcag aagagcttac cgcactatgt
      241 agggaggaaa aatcacaaca tgcttgtgaa tctgtcagtc ttaatagttt attttcaatc
      301 taggagctct atatttcaag aagattgtga cgttgtttcg gattctccac cccgaattaa
      361 gatcaagcta aggccatact cacgagattc gtgttacgag gattcagatg tttcagctat
      421 tctttcaata aggtttttac ctggatatcc ttacaagtgt cccaagctgc tgataatttc
      481 agaaaaagga ttatcaaaat ctgatgcaga caagttattg tcattggttc aagatcaagc
      541 caatttaaat gcccgagaag gacgtgtgat gatttataac ttggttgagg ctgcacaaga
      601 atttttgtct gaagttgtct catcagagca accaccttta tctcaaaaga ctgttgcagt
      661 ttcaagtgaa aggtcttcca aagggccttt tgtatacggt ttcatagatc ttttcatagg
      721 ctctggggag tcatggcatt ggggaatttc agttgaagaa aacagcaata caaacattac
      781 tgtagataat ctgcaaaatg gtagtcaacc attgttggaa aaagtcaatc aaaatatgaa
      841 gacgggggtg gttgaggagg ctaaactgga taaagtaata agctctacag gaaaagttgt
      901 cattttggaa gaatctagta agagtagtga ttctcgtaca tcaccatctg aggaatcaat
      961 ggaggatgta agcatcggtg aggattatcc tctggcagag gatactgaag aagaaactga
     1021 ttatgatcag attagaagtg attattcaga atcagaatca tccacatcaa cgaatcataa
     1081 tcagatttca caaactgttg agagagattt ggttttggct catttgctac gacttgcatg
     1141 tgctcctaaa ggtccacttg gtgatgcctt gactgatgtg gcatcagagc tggttaatct
     1201 agggattgtt tcagagcggg tggcagattt agcaacagaa tcatcatcac tatttgataa
     1261 aagcttcaat caatccttta aacatcgtac ggtagcctca aaggtttctc agttttggaa
     1321 attttcttct gatttcgaag ggcagcatac ctcacctatg ttaaattctc gttatttgaa
     1381 tgactttgag gagctaaaac cgcttggtca tggtgggttc ggccatgttg tgctatgcaa
     1441 gaataagcta gatggaagac agtatgctgt taagaaaatt cgactaaagg acaatagtca
     1501 accattagat gacaggattt taagagaagt agccactctt tcccgattgc agcaccaaca
     1561 tgttgtacgt tactatcagg catggtttga aacaggagaa accgggtcct atggtgatgc
     1621 taacttgggt tccaggactg cagctagctc cagttttagt tacctagacc agagttcaac
     1681 agatgtggtg ggacaggaca acaaagttag aacgtacctc tacattcaaa tggaatattg
     1741 cccaaggact ctccgacaga tgtttgaatc ttatgatcac tttgacaaga agttgacctg
     1801 gcactggttt cgtcaaatag ttgaaggcct ggcacacata catggtcaag gaattatcca
     1861 tcgtgatctg actccaaata atattttctt tgatgctcgc aatgatatta aaatagggga
     1921 ctttggtctc gctaagtttc tgaagttgga gcagttggaa caagacgtag atcctgcaga
     1981 aacaactgga gtgtcggttg atggtactgg tcaggttgga acctattttt atactgcacc
     2041 agaaatcgag cagcgttggc caaaaattaa cgagaaagct gatatgtata gtttgggaat
     2101 tgtattcttt gagctgtggc atccctttag cactggaatg gaacgacaca ttgttctttc
     2161 tgagttaaaa aagatggggg agcttccttc ggattgggtt gctgagtttc ccgaacaggc
     2221 ttcgttattg cgtaagatga tgtcaccaag cccatcagac cgtccatcta ccacagatct
     2281 cctcaaacat gcttttcctc caagaatgga gtctgaattg gtagacaata tcttacgaac
     2341 aatgcacaac tctgaggacc ccaccatcta taataaagtt gtggatgcta tcttcaacga
     2401 ggagatatta agtagtaaaa accaagatgg cgtacttgaa ataccaaaat tagttggaaa
     2461 taactcctca tctatacaac atacaagttt ggatactgaa attcgtgacc tagtttggga
     2521 ggcatctgct gcagtcttta ggttgcattg tgcaaaacgt ttggaaataa ttccaatgcg
     2581 tttgctagga gatcttcaac agtttaatag gaactcggtt aagcttttga cagatggtgg
     2641 agacttgata gaactctgcc acgagctgcg tttacccttt attaattggg tagttctaca
     2701 acagaaatct tctttcaaac gatttgaaat atgctatgta tatcgtagac caattggtca
     2761 ttcccctcca aatcggtatc ttcagggaga ctttgatgta attggaggtg cttctatact
     2821 gacagaggct gaggttatca aggctgccat ggatatcata agtcaatttt cccatctaga
     2881 atcatgtgac atacatctga atcatgctga tttgttagaa gcaatttggt catggattgg
     2941 aattaaggct gaccatagac aaaaagtagc agaacttctg tctcttttgg gttccttgcg
     3001 tccccagtcc tccgagagaa aaacaaagtg ggtggtgata agacggcagc ttagacagga
     3061 acttaatatc agtgaagggg ccgttaataa attgcagact gtgggtttaa ggttttgcgg
     3121 aactgcagat caggctcttc ccagattacg aggtgccctc cctgctgata cacctatacg
     3181 aaaggcactt gatgaactat ctgagatttt taattattta cgtatctgga agattgataa
     3241 gcaagttttc atcgatccac ttatgccacc cgctgagggt tatcacagag attcattttt
     3301 ccagatttat tcgaggaagg ataatagtct tggatcgctt acagaaggaa tcttgcttgc
     3361 cgttggtggt cgctacgatt acctccttca caatatgtgg caatctgaat acaaatcaaa
     3421 tcctccggga gcagttggga ctagtcttgc tttggaaacc atcattcaac attctgctgt
     3481 tgatatttac aaacctttta gaagtgattc cagtaaaagt gttcttgttt gttcaagagg
     3541 tggaggtggt ttactggaga agcgtatgga gttagtttcc gaattgtgga atgaagatat
     3601 caaggcggag tttgtgccga ctttggatcc tagccttaca gaacagtacg agtatgccaa
     3661 cgaacatgac attaaatgtc ttattatcat atcagattcc gatgtttctc aaaaaggatc
     3721 tgttaaggtt cgtcatcttg agcttaaaag ggagaaggaa ataagtcgag aatcactcat
     3781 caaattcttg tcggaagcaa tgaactctca gtttagaaac ccatcaatat ggaattaaac
     3841 aatgaactta gataccacga ttcaccgagt ttactttttt ggtaatcgtc tttacatgct
     3901 tctgatcgaa gttcaaaatt ttgttagttc ggtgaactca atttcaatgg tgaatacaga
     3961 ggttcaagct tgtttttcta tacatgcaca taataggagg ctattaattt gagttatttt
     4021 ggtaagtcgt caacatttgc tcaaaactaa aggaaaaatt aatcctctat gattgaattt
     4081 tcctgccaaa acttgtgttg aaatttcctc tatacttgaa tgcaaaatga tagtcaagag
     4141 tatgaatgta tgattgtcta aaaatttgat tacaattatc tttattacat cctgatgtac
     4201 ataaataata ttcctcgggc ctatatccta ttcatggttt tattacggat gcgagccctg
     4261 atatgttcac gttatgatat ccggaagtgt aaaagagtaa tata
//
LOCUS       XM_071829922            3667 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eIF-2-alpha kinase GCN2
            (LOC139839770), transcript variant X3, mRNA.
ACCESSION   XM_071829922
VERSION     XM_071829922.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3667
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3667
                     /gene="LOC139839770"
                     /note="eIF-2-alpha kinase GCN2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839770"
     CDS             122..3520
                     /gene="LOC139839770"
                     /codon_start=1
                     /product="eIF-2-alpha kinase GCN2 isoform X3"
                     /protein_id="XP_071686023.1"
                     /db_xref="GeneID:139839770"
                     /translation="MGHRSKKKKRGGSGRRRTPHDDHTSIDDVGGELLSEELTALSSI
                     FQEDCDVVSDSPPRIKIKLRPYSRDSCYEDSDVSAILSIRFLPGYPYKCPKLLIISEK
                     GLSKSDADKLLSLVQDQANLNAREGRVMIYNLVEAAQEFLSEVVSSEQPPLSQKTVAV
                     SSERSSKGPFVYGFIDLFIGSGESWHWGISVEENSNTNITVDNLQNGSQPLLEKVNQN
                     MKTGVVEEAKLDKVISSTGKVVILEESSKSSDSRTSPSEESMEDVSIGEDYPLAEDTE
                     EETDYDQIRSDYSESESSTSTNHNQISQTVERDLVLAHLLRLACAPKGPLGDALTDVA
                     SELVNLGIVSERVADLATESSSLFDKSFNQSFKHRTVASKVSQFWKFSSDFEGQHTSP
                     MLNSRYLNDFEELKPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDNSQPLDDRILREV
                     ATLSRLQHQHVVRYYQAWFETGETGSYGDANLGSRTAASSSFSYLDQSSTDVVGQDNK
                     VRTYLYIQMEYCPRTLRQMFESYDHFDKKLTWHWFRQIVEGLAHIHGQGIIHRDLTPN
                     NIFFDARNDIKIGDFGLAKFLKLEQLEQDVDPAETTGVSVDGTGQVGTYFYTAPEIEQ
                     RWPKINEKADMYSLGIVFFELWHPFSTGMERHIVLSELKKMGELPSDWVAEFPEQASL
                     LRKMMSPSPSDRPSTTDLLKHAFPPRMESELVDNILRTMHNSEDPTIYNKVVDAIFNE
                     EILSSKNQDGVLEIPKLVGNNSSSIQHTSLDTEIRDLVWEASAAVFRLHCAKRLEIIP
                     MRLLGDLQQFNRNSVKLLTDGGDLIELCHELRLPFINWVVLQQKSSFKRFEICYVYRR
                     PIGHSPPNRYLQGDFDVIGGASILTEAEVIKAAMDIISQFSHLESCDIHLNHADLLEA
                     IWSWIGIKADHRQKVAELLSLLGSLRPQSSERKTKWVVIRRQLRQELNISEGAVNKLQ
                     TVGLRFCGTADQALPRLRGALPAVQIHLYERHLMNYLRFLIIYVSGRLISKFSSIHLC
                     HPLRVITEIHFSRFIRGRIIVLDRLQKESCLPLVVATITSFTICGNLNTNQILREQLG
                     LVLLWKPSFNILLLIFTNLLEVIPVKVFLFVQEVEVVYWRSVWS"
     misc_feature    221..550
                     /gene="LOC139839770"
                     /note="RWD domain of RING finger protein 25 (RNF25) and
                     related proteins; Region: RWD_RNF25; cd23818"
                     /db_xref="CDD:467654"
     misc_feature    1307..2233
                     /gene="LOC139839770"
                     /note="Catalytic domain, repeat 2, of the Serine/Threonine
                     kinase, eukaryotic translation Initiation Factor 2-Alpha
                     Kinase 4 or General Control Non-derepressible-2; Region:
                     STKc_EIF2AK4_GCN2_rpt2; cd14046"
                     /db_xref="CDD:270948"
     misc_feature    order(1307..1312,1319..1324,1460..1465,1472..1477,
                     1481..1486,1490..1492,1508..1534,1538..1540,1658..1660,
                     1775..1777,1784..1792)
                     /gene="LOC139839770"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    order(1343..1348,1361..1363,1367..1369,1406..1408,
                     1412..1414,1670..1681,1688..1690,1817..1822,1826..1828,
                     1859..1861,1961..1969,2063..2065,2069..2092)
                     /gene="LOC139839770"
                     /note="active site"
                     /db_xref="CDD:270948"
     misc_feature    order(1343..1348,1367..1369,1406..1408,1412..1414,
                     1505..1507,1670..1681,1805..1807,1811..1813,1820..1822,
                     1826..1828,1859..1861)
                     /gene="LOC139839770"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    order(1856..1885,1904..1927,1934..1969)
                     /gene="LOC139839770"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270948"
     misc_feature    order(1961..1969,2063..2065,2069..2092)
                     /gene="LOC139839770"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270948"
     misc_feature    <2441..>3001
                     /gene="LOC139839770"
                     /note="Histidyl-tRNA synthetase; Region: PLN02972"
                     /db_xref="CDD:215525"
ORIGIN      
        1 aatccaaaca agctcacctc cctccctctc tctttgctgc tttggttgtt gtagtgactt
       61 gcttcaattg gtatgaatca gtgtctaatt gtattcattc acagctgaaa atcgacgtga
      121 tatgggtcac agatccaaaa agaagaagcg tggtggttca gggagacgta ggacacctca
      181 cgacgatcac acttctattg atgacgtcgg cggcgagctt ctatcagaag agcttaccgc
      241 actgagctct atatttcaag aagattgtga cgttgtttcg gattctccac cccgaattaa
      301 gatcaagcta aggccatact cacgagattc gtgttacgag gattcagatg tttcagctat
      361 tctttcaata aggtttttac ctggatatcc ttacaagtgt cccaagctgc tgataatttc
      421 agaaaaagga ttatcaaaat ctgatgcaga caagttattg tcattggttc aagatcaagc
      481 caatttaaat gcccgagaag gacgtgtgat gatttataac ttggttgagg ctgcacaaga
      541 atttttgtct gaagttgtct catcagagca accaccttta tctcaaaaga ctgttgcagt
      601 ttcaagtgaa aggtcttcca aagggccttt tgtatacggt ttcatagatc ttttcatagg
      661 ctctggggag tcatggcatt ggggaatttc agttgaagaa aacagcaata caaacattac
      721 tgtagataat ctgcaaaatg gtagtcaacc attgttggaa aaagtcaatc aaaatatgaa
      781 gacgggggtg gttgaggagg ctaaactgga taaagtaata agctctacag gaaaagttgt
      841 cattttggaa gaatctagta agagtagtga ttctcgtaca tcaccatctg aggaatcaat
      901 ggaggatgta agcatcggtg aggattatcc tctggcagag gatactgaag aagaaactga
      961 ttatgatcag attagaagtg attattcaga atcagaatca tccacatcaa cgaatcataa
     1021 tcagatttca caaactgttg agagagattt ggttttggct catttgctac gacttgcatg
     1081 tgctcctaaa ggtccacttg gtgatgcctt gactgatgtg gcatcagagc tggttaatct
     1141 agggattgtt tcagagcggg tggcagattt agcaacagaa tcatcatcac tatttgataa
     1201 aagcttcaat caatccttta aacatcgtac ggtagcctca aaggtttctc agttttggaa
     1261 attttcttct gatttcgaag ggcagcatac ctcacctatg ttaaattctc gttatttgaa
     1321 tgactttgag gagctaaaac cgcttggtca tggtgggttc ggccatgttg tgctatgcaa
     1381 gaataagcta gatggaagac agtatgctgt taagaaaatt cgactaaagg acaatagtca
     1441 accattagat gacaggattt taagagaagt agccactctt tcccgattgc agcaccaaca
     1501 tgttgtacgt tactatcagg catggtttga aacaggagaa accgggtcct atggtgatgc
     1561 taacttgggt tccaggactg cagctagctc cagttttagt tacctagacc agagttcaac
     1621 agatgtggtg ggacaggaca acaaagttag aacgtacctc tacattcaaa tggaatattg
     1681 cccaaggact ctccgacaga tgtttgaatc ttatgatcac tttgacaaga agttgacctg
     1741 gcactggttt cgtcaaatag ttgaaggcct ggcacacata catggtcaag gaattatcca
     1801 tcgtgatctg actccaaata atattttctt tgatgctcgc aatgatatta aaatagggga
     1861 ctttggtctc gctaagtttc tgaagttgga gcagttggaa caagacgtag atcctgcaga
     1921 aacaactgga gtgtcggttg atggtactgg tcaggttgga acctattttt atactgcacc
     1981 agaaatcgag cagcgttggc caaaaattaa cgagaaagct gatatgtata gtttgggaat
     2041 tgtattcttt gagctgtggc atccctttag cactggaatg gaacgacaca ttgttctttc
     2101 tgagttaaaa aagatggggg agcttccttc ggattgggtt gctgagtttc ccgaacaggc
     2161 ttcgttattg cgtaagatga tgtcaccaag cccatcagac cgtccatcta ccacagatct
     2221 cctcaaacat gcttttcctc caagaatgga gtctgaattg gtagacaata tcttacgaac
     2281 aatgcacaac tctgaggacc ccaccatcta taataaagtt gtggatgcta tcttcaacga
     2341 ggagatatta agtagtaaaa accaagatgg cgtacttgaa ataccaaaat tagttggaaa
     2401 taactcctca tctatacaac atacaagttt ggatactgaa attcgtgacc tagtttggga
     2461 ggcatctgct gcagtcttta ggttgcattg tgcaaaacgt ttggaaataa ttccaatgcg
     2521 tttgctagga gatcttcaac agtttaatag gaactcggtt aagcttttga cagatggtgg
     2581 agacttgata gaactctgcc acgagctgcg tttacccttt attaattggg tagttctaca
     2641 acagaaatct tctttcaaac gatttgaaat atgctatgta tatcgtagac caattggtca
     2701 ttcccctcca aatcggtatc ttcagggaga ctttgatgta attggaggtg cttctatact
     2761 gacagaggct gaggttatca aggctgccat ggatatcata agtcaatttt cccatctaga
     2821 atcatgtgac atacatctga atcatgctga tttgttagaa gcaatttggt catggattgg
     2881 aattaaggct gaccatagac aaaaagtagc agaacttctg tctcttttgg gttccttgcg
     2941 tccccagtcc tccgagagaa aaacaaagtg ggtggtgata agacggcagc ttagacagga
     3001 acttaatatc agtgaagggg ccgttaataa attgcagact gtgggtttaa ggttttgcgg
     3061 aactgcagat caggctcttc ccagattacg aggtgccctc cctgctgtgc agatacacct
     3121 atacgaaagg cacttgatga actatctgag atttttaatt atttacgtat ctggaagatt
     3181 gataagcaag ttttcatcga tccacttatg ccacccgctg agggttatca cagagattca
     3241 tttttccaga tttattcgag gaaggataat agtcttggat cgcttacaga aggaatcttg
     3301 cttgccgttg gtggtcgcta cgattacctc cttcacaata tgtggcaatc tgaatacaaa
     3361 tcaaatcctc cgggagcagt tgggactagt cttgctttgg aaaccatcat tcaacattct
     3421 gctgttgata tttacaaacc ttttagaagt gattccagta aaagtgttct tgtttgttca
     3481 agaggtggag gtggtttact ggagaagcgt atggagttag tttccgaatt gtggaatgaa
     3541 gatatcaagg cggagtttgt gccgactttg gatcctagcc ttacagaaca gtacgagtat
     3601 gccaacgaac atgacattaa atgtcttatt atcatatcag attccgatgt ttctcaaaaa
     3661 ggatctg
//
LOCUS       XM_071829923            3039 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein argonaute 4-like
            (LOC139839771), transcript variant X1, mRNA.
ACCESSION   XM_071829923
VERSION     XM_071829923.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3039
                     /gene="LOC139839771"
                     /note="protein argonaute 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     Proteins"
                     /db_xref="GeneID:139839771"
     CDS             10..2751
                     /gene="LOC139839771"
                     /codon_start=1
                     /product="protein argonaute 4-like isoform X1"
                     /protein_id="XP_071686024.1"
                     /db_xref="GeneID:139839771"
                     /translation="MDSENGNTGVTDALPPPPPVTEDVVPIKAEPEPVKKKVMRVPMA
                     RRSLATKGQKAQLLTNHFKVNVSNVDGHFFHYSVALFYEDGRPTDGKGIGRKVLDKVH
                     ETYRSELDGKEFAYDGEKSLFTVGALPRNKLEFTIVLDNVTSNRNNGNASPDNDADKK
                     RVRRSYQSKTFKVELSFAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGC
                     LLVRQSFFHNDVKNFADVGGGVLGCRGFHSSFRTSKGGLSLNIDVSTTMIIQPGPVID
                     FLIANQNVTNPLSIDWAKAKRTLKNLRIKNDETNAEYKITGLSEKPCNQQLFSLRQKS
                     KDDNGEFSTDEITVQDYFVNIRKVNLRYSAELPCINVGKPKKPIFLPIEFCSLVSLQR
                     YTKSLNTMQRASLVEKSRQKPQERMRVLTDALKLNNYDAEPLLKSCGISISNNFTQVE
                     GRVLPAPKLKVGNGEDFFPRNGRWNFNNKKLVDPTTITKWAVVNFSARCDIRKLVRDL
                     IKCGGLKGIKIEDPFEVFEESPQNRRAPPLVRVEKMFEYIKSKLAEICQNRWAPQFLL
                     CLLPERKNSDLYGPWKKTSLADYGTVTQCIAPMKVNDQYLTNVLLKINAKLGGLNSKL
                     AVEVNRSIPIVSKSPTIILGMDVSHGQPGQSDVPSIAAVVSSRHYPLISRYRASVRTQ
                     SPKVEMIDSLFKKVSDTEDEGIMRELLLDYYVTSAQRKPEQIIIFRDGVSESQFSQVL
                     NIELDQIIEACKFLDENWCPKFLVIIAQKNHHTKFFQPGSPDNVPPGTVIDNKVCHPR
                     NNDFYMCAHAGMIGTTRPTHYHVLYDEIGFSADDLQELVHSLSYVYQRSTTAISVVAP
                     ICYAHLAATQMSQFIKFEDHSETSSSHGGTGVTSAGAVPVPQLPKLQKNVCNSMFFC"
     misc_feature    40..2748
                     /gene="LOC139839771"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
ORIGIN      
        1 taatcaaata tggattcgga aaatggcaac actggggtta cagatgcttt accaccacct
       61 ccacctgtca ctgaagacgt cgttccaatc aaagctgagc ctgaacccgt caagaagaag
      121 gtcatgcggg tccccatggc tagacgcagt ctggccacca aaggtcaaaa agcacagctg
      181 ttgaccaatc actttaaagt caacgtttct aatgttgatg gccacttctt tcactacagt
      241 gtggcgcttt tctatgaaga cggtcgtcct accgatggga aaggtattgg acgaaaagtg
      301 ctcgataaag tacatgaaac gtaccgctcc gaattagacg gaaaagaatt cgcgtacgat
      361 ggggaaaaaa gtttgtttac tgttggtgcg cttccaagaa acaaactcga gttcaccatt
      421 gtactcgata atgtcacgtc aaacagaaac aatggaaatg caagcccgga taatgacgca
      481 gacaagaaac gtgtgcgccg atcataccaa tccaaaactt ttaaagtcga gttgagtttc
      541 gcagctaaaa tcccgatgca agcaattgca caagcgttac gaggtcagga atcggaaaac
      601 tcacaagaag ccttgagggt gcttgatatt atcttaaggc aacatgctgc taaacaggga
      661 tgtcttcttg ttcgtcaatc attttttcac aatgatgtca agaactttgc tgatgtggga
      721 ggcggtgttc ttggctgccg tggattccat tcaagttttc gtacatctaa gggtggtcta
      781 tccctgaaca tagatgtatc taccaccatg attatccaac ctgggccggt aattgatttt
      841 ctgattgcta accaaaatgt tacaaatccc ctttccattg actgggcaaa ggcaaagcgt
      901 acactaaaga accttaggat caagaacgat gagacaaatg ctgaatacaa gataactggt
      961 ttgagtgaaa aaccctgcaa tcagcagctg ttttcattga ggcaaaagtc caaagacgat
     1021 aatggtgaat ttagtacaga tgaaatcact gttcaagatt attttgttaa tattcgcaaa
     1081 gttaatttgc gctattctgc tgagctaccc tgcattaatg ttgggaagcc gaaaaagcca
     1141 atatttctcc ctatcgagtt ctgctcgttg gtttccttgc aacgctatac aaaatcactc
     1201 aatacaatgc aacgagccag tttggtggaa aaatcccgcc aaaagccaca agaaagaatg
     1261 agggttttga ctgatgcttt aaaactcaat aactatgatg ctgagcctct gctgaaatcg
     1321 tgtggcattt cgattagtaa caatttcaca caagttgaag gaagagttct tcctgcacca
     1381 aagctgaaag ttgggaatgg tgaagatttc tttccgcgaa atggtcgctg gaactttaac
     1441 aacaagaaac ttgtggatcc cacaactatc accaaatggg cagttgttaa cttctctgct
     1501 agatgtgaca tccgtaaact tgtaagggat ttgatcaaat gtggaggctt gaaaggaatt
     1561 aaaattgaag atcctttcga ggtgtttgag gaaagtcctc aaaataggcg ggccccacca
     1621 cttgttagag ttgagaagat gtttgaatac attaagtcta aacttgctga aatttgtcaa
     1681 aataggtggg ctccacagtt tttactttgc ttgttgccgg agcgaaagaa ctctgatctc
     1741 tatggtcctt ggaagaaaac gagtcttgct gattatggca ccgtgactca atgcattgca
     1801 cccatgaagg tcaatgatca gtatttaaca aatgtactgc tgaagattaa cgctaagctc
     1861 ggtggattga actctaagct agccgttgag gttaaccggt ctattccaat tgtatccaag
     1921 tccccaacca tcattcttgg tatggacgtt tcacatggcc agcctggaca gtctgatgtc
     1981 ccctcaattg ctgcggttgt tagttcacgt cactatccct tgatctctcg ttatcgagct
     2041 tctgtgcgta ctcagtcccc aaaagtggaa atgatagact ctttgtttaa aaaagtttct
     2101 gacaccgagg atgaaggcat catgagggag cttctccttg actactatgt gacatcagcc
     2161 cagcgaaagc ccgagcagat cattatcttt agggatggtg ttagtgagtc acagttctct
     2221 caagttctta acatcgaatt ggaccaaatt atcgaggcat gcaaatttct ggatgaaaat
     2281 tggtgcccta aatttcttgt gataattgcc caaaagaatc accacactaa gtttttccag
     2341 ccaggatctc cggataatgt tccacctgga acggtgattg ataacaaggt gtgtcatccc
     2401 cgtaacaatg atttctacat gtgcgcgcat gctgggatga tagggacgac aaggcccaca
     2461 cattaccatg tgttgtatga tgaaattggg ttttcagctg atgatcttca ggagcttgta
     2521 cactctttgt catatgttta ccagagaagc accaccgcaa tttctgttgt tgcacctatt
     2581 tgctatgctc atttagcagc aacacagatg tctcagttca taaagtttga ggaccactcg
     2641 gagacatctt caagccatgg tggaactggt gttacgtctg ccggagcagt gccagtacct
     2701 cagctaccga aattgcagaa gaatgtctgc aactctatgt ttttctgcta aatctattac
     2761 tataaactta ctagacaata gtagtttgta catagtggag gcatgttttg tggcctagct
     2821 cctttcacgg agttgaactc aaggccgttt tgtgaatgtt ttggatgccg catgcttgtc
     2881 aagatctaaa tactaccgtt ttggatgtgc atgttttctt tgttgtcttg tcgatgtatt
     2941 gttgtcttgt tgataccaga attagtcttt aacttgaaga ttacccaata tttgacaagg
     3001 gtaaactttt acgagttgta tgtttggagt acagtacga
//
LOCUS       XM_071829924            2684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein argonaute 4-like
            (LOC139839771), transcript variant X2, mRNA.
ACCESSION   XM_071829924
VERSION     XM_071829924.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2684
                     /gene="LOC139839771"
                     /note="protein argonaute 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839771"
     CDS             10..2541
                     /gene="LOC139839771"
                     /codon_start=1
                     /product="protein argonaute 4-like isoform X2"
                     /protein_id="XP_071686025.1"
                     /db_xref="GeneID:139839771"
                     /translation="MDSENGNTGVTDALPPPPPVTEDVVPIKAEPEPVKKKVMRVPMA
                     RRSLATKGQKAQLLTNHFKVNVSNVDGHFFHYSVALFYEDGRPTDGKGIGRKVLDKVH
                     ETYRSELDGKEFAYDGEKSLFTVGALPRNKLEFTIVLDNVTSNRNNGNASPDNDADKK
                     RVRRSYQSKTFKVELSFAAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGC
                     LLVRQSFFHNDVKNFADVGGGVLGCRGFHSSFRTSKGGLSLNIDVSTTMIIQPGPVID
                     FLIANQNVTNPLSIDWAKAKRTLKNLRIKNDETNAEYKITGLSEKPCNQQLFSLRQKS
                     KDDNGEFSTDEITVQDYFVNIRKVNLRYSAELPCINVGKPKKPIFLPIEFCSLVSLQR
                     YTKSLNTMQRASLVEKSRQKPQERMRVLTDALKLNNYDAEPLLKSCGISISNNFTQVE
                     GRVLPAPKLKVGNGEDFFPRNGRWNFNNKKLVDPTTITKWAVVNFSARCDIRKLVRDL
                     IKCGGLKGIKIEDPFEVFEESPQNRRAPPLVRVEKMFEYIKSKLAEICQNRWAPQFLL
                     CLLPERKNSDLYGPWKKTSLADYGTVTQCIAPMKVNDQYLTNVLLKINAKLGGLNSKL
                     AVEVNRSIPIVSKSPTIILGMDVSHGQPGQSDVPSIAAVVSSRHYPLISRYRASVRTQ
                     SPKVEMIDSLFKKVSDTEDEGIMRELLLDYYVTSAQRKPEQIIIFRDGVSESQFSQVL
                     NIELDQIIEACKFLDENWCPKFLVIIAQKNHHTKFFQPGSPDNVPPGTVIDNKVCHPR
                     NNDFYMCAHAGMILMIFRSLYTLCHMFTREAPPQFLLLHLFAMLI"
     misc_feature    40..2442
                     /gene="LOC139839771"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
ORIGIN      
        1 taatcaaata tggattcgga aaatggcaac actggggtta cagatgcttt accaccacct
       61 ccacctgtca ctgaagacgt cgttccaatc aaagctgagc ctgaacccgt caagaagaag
      121 gtcatgcggg tccccatggc tagacgcagt ctggccacca aaggtcaaaa agcacagctg
      181 ttgaccaatc actttaaagt caacgtttct aatgttgatg gccacttctt tcactacagt
      241 gtggcgcttt tctatgaaga cggtcgtcct accgatggga aaggtattgg acgaaaagtg
      301 ctcgataaag tacatgaaac gtaccgctcc gaattagacg gaaaagaatt cgcgtacgat
      361 ggggaaaaaa gtttgtttac tgttggtgcg cttccaagaa acaaactcga gttcaccatt
      421 gtactcgata atgtcacgtc aaacagaaac aatggaaatg caagcccgga taatgacgca
      481 gacaagaaac gtgtgcgccg atcataccaa tccaaaactt ttaaagtcga gttgagtttc
      541 gcagctaaaa tcccgatgca agcaattgca caagcgttac gaggtcagga atcggaaaac
      601 tcacaagaag ccttgagggt gcttgatatt atcttaaggc aacatgctgc taaacaggga
      661 tgtcttcttg ttcgtcaatc attttttcac aatgatgtca agaactttgc tgatgtggga
      721 ggcggtgttc ttggctgccg tggattccat tcaagttttc gtacatctaa gggtggtcta
      781 tccctgaaca tagatgtatc taccaccatg attatccaac ctgggccggt aattgatttt
      841 ctgattgcta accaaaatgt tacaaatccc ctttccattg actgggcaaa ggcaaagcgt
      901 acactaaaga accttaggat caagaacgat gagacaaatg ctgaatacaa gataactggt
      961 ttgagtgaaa aaccctgcaa tcagcagctg ttttcattga ggcaaaagtc caaagacgat
     1021 aatggtgaat ttagtacaga tgaaatcact gttcaagatt attttgttaa tattcgcaaa
     1081 gttaatttgc gctattctgc tgagctaccc tgcattaatg ttgggaagcc gaaaaagcca
     1141 atatttctcc ctatcgagtt ctgctcgttg gtttccttgc aacgctatac aaaatcactc
     1201 aatacaatgc aacgagccag tttggtggaa aaatcccgcc aaaagccaca agaaagaatg
     1261 agggttttga ctgatgcttt aaaactcaat aactatgatg ctgagcctct gctgaaatcg
     1321 tgtggcattt cgattagtaa caatttcaca caagttgaag gaagagttct tcctgcacca
     1381 aagctgaaag ttgggaatgg tgaagatttc tttccgcgaa atggtcgctg gaactttaac
     1441 aacaagaaac ttgtggatcc cacaactatc accaaatggg cagttgttaa cttctctgct
     1501 agatgtgaca tccgtaaact tgtaagggat ttgatcaaat gtggaggctt gaaaggaatt
     1561 aaaattgaag atcctttcga ggtgtttgag gaaagtcctc aaaataggcg ggccccacca
     1621 cttgttagag ttgagaagat gtttgaatac attaagtcta aacttgctga aatttgtcaa
     1681 aataggtggg ctccacagtt tttactttgc ttgttgccgg agcgaaagaa ctctgatctc
     1741 tatggtcctt ggaagaaaac gagtcttgct gattatggca ccgtgactca atgcattgca
     1801 cccatgaagg tcaatgatca gtatttaaca aatgtactgc tgaagattaa cgctaagctc
     1861 ggtggattga actctaagct agccgttgag gttaaccggt ctattccaat tgtatccaag
     1921 tccccaacca tcattcttgg tatggacgtt tcacatggcc agcctggaca gtctgatgtc
     1981 ccctcaattg ctgcggttgt tagttcacgt cactatccct tgatctctcg ttatcgagct
     2041 tctgtgcgta ctcagtcccc aaaagtggaa atgatagact ctttgtttaa aaaagtttct
     2101 gacaccgagg atgaaggcat catgagggag cttctccttg actactatgt gacatcagcc
     2161 cagcgaaagc ccgagcagat cattatcttt agggatggtg ttagtgagtc acagttctct
     2221 caagttctta acatcgaatt ggaccaaatt atcgaggcat gcaaatttct ggatgaaaat
     2281 tggtgcccta aatttcttgt gataattgcc caaaagaatc accacactaa gtttttccag
     2341 ccaggatctc cggataatgt tccacctgga acggtgattg ataacaaggt gtgtcatccc
     2401 cgtaacaatg atttctacat gtgcgcgcat gctgggatga tactgatgat cttcaggagc
     2461 ttgtacactc tttgtcatat gtttaccaga gaagcaccac cgcaatttct gttgttgcac
     2521 ctatttgcta tgctcattta gcagcaacac agatgtctca gttcataaag tttgaggacc
     2581 actcggagac atcttcaagc catggtggaa ctggtgttac gtctgccgga gcagtgccag
     2641 tacctcagct accgaaattg cagaagaatg tctgcaactc tatg
//
LOCUS       XM_071829925            1889 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aldehyde dehydrogenase
            family 7 member B4 (LOC139839772), transcript variant X1, mRNA.
ACCESSION   XM_071829925
VERSION     XM_071829925.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1889
                     /gene="LOC139839772"
                     /note="aldehyde dehydrogenase family 7 member B4; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139839772"
     CDS             163..1686
                     /gene="LOC139839772"
                     /codon_start=1
                     /product="aldehyde dehydrogenase family 7 member B4"
                     /protein_id="XP_071686026.1"
                     /db_xref="GeneID:139839772"
                     /translation="MSFAKEYEFLTEIGIKPRNEGSFVNGAWKGTGTVVSSVNPANNK
                     PIAEVVEASLIEYEDGMQACYDASKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLLS
                     LEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGVVGVI
                     TAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIATTKLVAEVLEKNNLPAAIFT
                     SFCGGAEIGQAIAKDTRIPLVSFTGSSKVGLSVQQTVSQRFGKCLLELSGNNALIVMD
                     DADIKLAVRSVLFAAVGTAGQRCTTCRRLLVHEKVYDSVVEQLLEAYKQVKIGDPLEK
                     GTLLGPLHTQASRENFEKGIKVIKSQGGKILTGGSVIESEGNFVQPTIVEISPSADVV
                     KEELFGPVLYVLKFKTFEEAVAINNSVPQGLSSSIFTRSPELIFKWIGPQGSDCGIVN
                     ANIPTNGAEIGGAFGGEKGTGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG"
     misc_feature    163..1683
                     /gene="LOC139839772"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; Region: ALDH-SF; cl11961"
                     /db_xref="CDD:448367"
     misc_feature    order(367..369,385..387,394..396,412..414,433..435,
                     550..555,559..561,565..567,571..573,577..588,607..612,
                     616..618,907..909,916..921,928..930,943..948,1027..1029,
                     1135..1137,1171..1173,1390..1392,1459..1461,1477..1482,
                     1492..1494,1501..1503,1507..1518,1534..1539,1549..1551,
                     1561..1563,1582..1584,1594..1599,1606..1608,1618..1635,
                     1639..1644)
                     /gene="LOC139839772"
                     /note="tetrameric interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:143448"
     misc_feature    order(643..654,721..723,727..732,841..846,883..894,
                     901..903,910..912,955..963,1057..1059,1345..1347,
                     1552..1554)
                     /gene="LOC139839772"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:143448"
     misc_feature    order(652..654,955..957,1048..1050,1057..1059)
                     /gene="LOC139839772"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143448"
     polyA_site      1889
                     /gene="LOC139839772"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acattttgtc gtatcatcag tcttctctag taacacgcct ttctcatttt atctctatta
       61 attaaacgct ctatcatctg taactccata ctgctttaca atcactgccg tttctccccc
      121 aatttttgat taacatcatc cgagtgcgtt tcaggtacag atatgagttt tgctaaagag
      181 tacgagtttt tgacggagat tggaatcaag ccgcgaaacg aaggtagttt tgttaacggt
      241 gcttggaaag gaactggtac tgttgtttct tctgttaatc ctgctaacaa taagcccatt
      301 gctgaagtcg tggaagcttc tttaatagag tatgaagatg gaatgcaggc ttgttatgac
      361 gcctcaaaga tctggatgca agttcctgca ccaaagcgag gcgagattgt tagacagatt
      421 ggtgatgcac tgagagcgaa acttgactac cttggtcggc ttttatcgct tgagatggga
      481 aaaattcttc ctgaaggaat tggagaagtt caagaagtta ttgatatgtg cgactttgca
      541 gtgggcttaa gccgacaact aaatggatca gttatacctt ctgaacgtcc aaatcatatg
      601 atgctcgaga tgtggaatcc tctcggcgta gttggtgtca ttacagcctt caatttccct
      661 tgtgctgttc ttggatggaa tgcgtgcatt gctttagttt gcggaaactg tgttgtttgg
      721 aaaggtgctc caaccacacc tttaataaca atagcaacga ccaaactagt tgcagaagtg
      781 cttgaaaaga acaatttacc cgctgcaatc ttcacctcat tttgtggggg tgcagaaatt
      841 ggtcaagcta tagcaaaaga tacacgcata cccttggttt ccttcactgg aagttcaaag
      901 gttggtcttt cagttcaaca aacagtaagc cagaggttcg gtaaatgcct gcttgaattg
      961 agtggaaata atgctttaat agtcatggat gatgccgaca tcaaacttgc tgttcgttct
     1021 gtcttgtttg ccgctgttgg taccgctggc cagcgctgca caacatgtcg tagactgctt
     1081 gttcatgaaa aggtttatga ttctgtggtt gaacaactac ttgaagcgta caaacaagtt
     1141 aaaatcgggg atccattgga gaaaggtacg ctgcttggac cattgcacac tcaagcttca
     1201 agagagaatt tcgagaaggg aattaaagtt atcaagtctc agggtggtaa aatcctcaca
     1261 ggtggttcag ttatagaatc tgaaggaaac tttgtgcagc ccacaatagt agaaatttca
     1321 ccaagtgccg acgtagtgaa ggaagaactc tttggtcctg ttctgtatgt cctaaagttc
     1381 aagacttttg aagaagctgt tgcaataaac aactcggtcc ctcaaggatt gtctagttcc
     1441 atatttactc gttcacctga acttattttc aaatggatcg gacctcaagg tagtgattgc
     1501 ggtattgtta atgcaaatat accaaccaat ggggctgaaa ttggtggtgc ttttggtggg
     1561 gagaagggta ctgggggcgg tcgtgaagca gggagcgact cctggaaaca gtatatgaga
     1621 cgctcaactt gtacaatcaa ctatgggagc gaattaccac ttgcacaggg gatcaacttt
     1681 ggctagtagg tttactcgcc cggtgtaata tcagtacagg aaatcatggg aaacacagca
     1741 ttggtggtgc ttagtcttaa tgcttaactg tttgtaatta cgtcatatta taaaacaatt
     1801 aaataaaggc acatccattt actcatttca gagcgggtga tgatctattc gataattcta
     1861 attttgttat attttgctct attctccca
//
LOCUS       XM_071829926            1819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aldehyde dehydrogenase
            family 7 member B4 (LOC139839772), transcript variant X2, mRNA.
ACCESSION   XM_071829926
VERSION     XM_071829926.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1819
                     /gene="LOC139839772"
                     /note="aldehyde dehydrogenase family 7 member B4; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139839772"
     CDS             93..1616
                     /gene="LOC139839772"
                     /codon_start=1
                     /product="aldehyde dehydrogenase family 7 member B4"
                     /protein_id="XP_071686027.1"
                     /db_xref="GeneID:139839772"
                     /translation="MSFAKEYEFLTEIGIKPRNEGSFVNGAWKGTGTVVSSVNPANNK
                     PIAEVVEASLIEYEDGMQACYDASKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLLS
                     LEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGVVGVI
                     TAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIATTKLVAEVLEKNNLPAAIFT
                     SFCGGAEIGQAIAKDTRIPLVSFTGSSKVGLSVQQTVSQRFGKCLLELSGNNALIVMD
                     DADIKLAVRSVLFAAVGTAGQRCTTCRRLLVHEKVYDSVVEQLLEAYKQVKIGDPLEK
                     GTLLGPLHTQASRENFEKGIKVIKSQGGKILTGGSVIESEGNFVQPTIVEISPSADVV
                     KEELFGPVLYVLKFKTFEEAVAINNSVPQGLSSSIFTRSPELIFKWIGPQGSDCGIVN
                     ANIPTNGAEIGGAFGGEKGTGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG"
     misc_feature    93..1613
                     /gene="LOC139839772"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; Region: ALDH-SF; cl11961"
                     /db_xref="CDD:448367"
     misc_feature    order(297..299,315..317,324..326,342..344,363..365,
                     480..485,489..491,495..497,501..503,507..518,537..542,
                     546..548,837..839,846..851,858..860,873..878,957..959,
                     1065..1067,1101..1103,1320..1322,1389..1391,1407..1412,
                     1422..1424,1431..1433,1437..1448,1464..1469,1479..1481,
                     1491..1493,1512..1514,1524..1529,1536..1538,1548..1565,
                     1569..1574)
                     /gene="LOC139839772"
                     /note="tetrameric interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:143448"
     misc_feature    order(573..584,651..653,657..662,771..776,813..824,
                     831..833,840..842,885..893,987..989,1275..1277,1482..1484)
                     /gene="LOC139839772"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:143448"
     misc_feature    order(582..584,885..887,978..980,987..989)
                     /gene="LOC139839772"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143448"
     polyA_site      1819
                     /gene="LOC139839772"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacgctctat catctgtaac tccatactgc tttacaatca ctgccgtttc tcccccaatt
       61 tttgattaac atcatccgag tgcgtttcag atatgagttt tgctaaagag tacgagtttt
      121 tgacggagat tggaatcaag ccgcgaaacg aaggtagttt tgttaacggt gcttggaaag
      181 gaactggtac tgttgtttct tctgttaatc ctgctaacaa taagcccatt gctgaagtcg
      241 tggaagcttc tttaatagag tatgaagatg gaatgcaggc ttgttatgac gcctcaaaga
      301 tctggatgca agttcctgca ccaaagcgag gcgagattgt tagacagatt ggtgatgcac
      361 tgagagcgaa acttgactac cttggtcggc ttttatcgct tgagatggga aaaattcttc
      421 ctgaaggaat tggagaagtt caagaagtta ttgatatgtg cgactttgca gtgggcttaa
      481 gccgacaact aaatggatca gttatacctt ctgaacgtcc aaatcatatg atgctcgaga
      541 tgtggaatcc tctcggcgta gttggtgtca ttacagcctt caatttccct tgtgctgttc
      601 ttggatggaa tgcgtgcatt gctttagttt gcggaaactg tgttgtttgg aaaggtgctc
      661 caaccacacc tttaataaca atagcaacga ccaaactagt tgcagaagtg cttgaaaaga
      721 acaatttacc cgctgcaatc ttcacctcat tttgtggggg tgcagaaatt ggtcaagcta
      781 tagcaaaaga tacacgcata cccttggttt ccttcactgg aagttcaaag gttggtcttt
      841 cagttcaaca aacagtaagc cagaggttcg gtaaatgcct gcttgaattg agtggaaata
      901 atgctttaat agtcatggat gatgccgaca tcaaacttgc tgttcgttct gtcttgtttg
      961 ccgctgttgg taccgctggc cagcgctgca caacatgtcg tagactgctt gttcatgaaa
     1021 aggtttatga ttctgtggtt gaacaactac ttgaagcgta caaacaagtt aaaatcgggg
     1081 atccattgga gaaaggtacg ctgcttggac cattgcacac tcaagcttca agagagaatt
     1141 tcgagaaggg aattaaagtt atcaagtctc agggtggtaa aatcctcaca ggtggttcag
     1201 ttatagaatc tgaaggaaac tttgtgcagc ccacaatagt agaaatttca ccaagtgccg
     1261 acgtagtgaa ggaagaactc tttggtcctg ttctgtatgt cctaaagttc aagacttttg
     1321 aagaagctgt tgcaataaac aactcggtcc ctcaaggatt gtctagttcc atatttactc
     1381 gttcacctga acttattttc aaatggatcg gacctcaagg tagtgattgc ggtattgtta
     1441 atgcaaatat accaaccaat ggggctgaaa ttggtggtgc ttttggtggg gagaagggta
     1501 ctgggggcgg tcgtgaagca gggagcgact cctggaaaca gtatatgaga cgctcaactt
     1561 gtacaatcaa ctatgggagc gaattaccac ttgcacaggg gatcaacttt ggctagtagg
     1621 tttactcgcc cggtgtaata tcagtacagg aaatcatggg aaacacagca ttggtggtgc
     1681 ttagtcttaa tgcttaactg tttgtaatta cgtcatatta taaaacaatt aaataaaggc
     1741 acatccattt actcatttca gagcgggtga tgatctattc gataattcta attttgttat
     1801 attttgctct attctccca
//
LOCUS       XM_071829927            1884 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aldehyde dehydrogenase
            family 7 member B4 (LOC139839772), transcript variant X3, mRNA.
ACCESSION   XM_071829927
VERSION     XM_071829927.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1884
                     /gene="LOC139839772"
                     /note="aldehyde dehydrogenase family 7 member B4; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139839772"
     CDS             163..1686
                     /gene="LOC139839772"
                     /codon_start=1
                     /product="aldehyde dehydrogenase family 7 member B4"
                     /protein_id="XP_071686028.1"
                     /db_xref="GeneID:139839772"
                     /translation="MSFAKEYEFLTEIGIKPRNEGSFVNGAWKGTGTVVSSVNPANNK
                     PIAEVVEASLIEYEDGMQACYDASKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLLS
                     LEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGVVGVI
                     TAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIATTKLVAEVLEKNNLPAAIFT
                     SFCGGAEIGQAIAKDTRIPLVSFTGSSKVGLSVQQTVSQRFGKCLLELSGNNALIVMD
                     DADIKLAVRSVLFAAVGTAGQRCTTCRRLLVHEKVYDSVVEQLLEAYKQVKIGDPLEK
                     GTLLGPLHTQASRENFEKGIKVIKSQGGKILTGGSVIESEGNFVQPTIVEISPSADVV
                     KEELFGPVLYVLKFKTFEEAVAINNSVPQGLSSSIFTRSPELIFKWIGPQGSDCGIVN
                     ANIPTNGAEIGGAFGGEKGTGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG"
     misc_feature    163..1683
                     /gene="LOC139839772"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; Region: ALDH-SF; cl11961"
                     /db_xref="CDD:448367"
     misc_feature    order(367..369,385..387,394..396,412..414,433..435,
                     550..555,559..561,565..567,571..573,577..588,607..612,
                     616..618,907..909,916..921,928..930,943..948,1027..1029,
                     1135..1137,1171..1173,1390..1392,1459..1461,1477..1482,
                     1492..1494,1501..1503,1507..1518,1534..1539,1549..1551,
                     1561..1563,1582..1584,1594..1599,1606..1608,1618..1635,
                     1639..1644)
                     /gene="LOC139839772"
                     /note="tetrameric interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:143448"
     misc_feature    order(643..654,721..723,727..732,841..846,883..894,
                     901..903,910..912,955..963,1057..1059,1345..1347,
                     1552..1554)
                     /gene="LOC139839772"
                     /note="NAD binding site [chemical binding]; other site"
                     /db_xref="CDD:143448"
     misc_feature    order(652..654,955..957,1048..1050,1057..1059)
                     /gene="LOC139839772"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143448"
     polyA_site      1884
                     /gene="LOC139839772"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acattttgtc gtatcatcag tcttctctag taacacgcct ttctcatttt atctctatta
       61 attaaacgct ctatcatctg taactccata ctgctttaca atcactgccg tttctccccc
      121 aatttttgat taacatcatc cgagtgcgtt tcaggtacag atatgagttt tgctaaagag
      181 tacgagtttt tgacggagat tggaatcaag ccgcgaaacg aaggtagttt tgttaacggt
      241 gcttggaaag gaactggtac tgttgtttct tctgttaatc ctgctaacaa taagcccatt
      301 gctgaagtcg tggaagcttc tttaatagag tatgaagatg gaatgcaggc ttgttatgac
      361 gcctcaaaga tctggatgca agttcctgca ccaaagcgag gcgagattgt tagacagatt
      421 ggtgatgcac tgagagcgaa acttgactac cttggtcggc ttttatcgct tgagatggga
      481 aaaattcttc ctgaaggaat tggagaagtt caagaagtta ttgatatgtg cgactttgca
      541 gtgggcttaa gccgacaact aaatggatca gttatacctt ctgaacgtcc aaatcatatg
      601 atgctcgaga tgtggaatcc tctcggcgta gttggtgtca ttacagcctt caatttccct
      661 tgtgctgttc ttggatggaa tgcgtgcatt gctttagttt gcggaaactg tgttgtttgg
      721 aaaggtgctc caaccacacc tttaataaca atagcaacga ccaaactagt tgcagaagtg
      781 cttgaaaaga acaatttacc cgctgcaatc ttcacctcat tttgtggggg tgcagaaatt
      841 ggtcaagcta tagcaaaaga tacacgcata cccttggttt ccttcactgg aagttcaaag
      901 gttggtcttt cagttcaaca aacagtaagc cagaggttcg gtaaatgcct gcttgaattg
      961 agtggaaata atgctttaat agtcatggat gatgccgaca tcaaacttgc tgttcgttct
     1021 gtcttgtttg ccgctgttgg taccgctggc cagcgctgca caacatgtcg tagactgctt
     1081 gttcatgaaa aggtttatga ttctgtggtt gaacaactac ttgaagcgta caaacaagtt
     1141 aaaatcgggg atccattgga gaaaggtacg ctgcttggac cattgcacac tcaagcttca
     1201 agagagaatt tcgagaaggg aattaaagtt atcaagtctc agggtggtaa aatcctcaca
     1261 ggtggttcag ttatagaatc tgaaggaaac tttgtgcagc ccacaatagt agaaatttca
     1321 ccaagtgccg acgtagtgaa ggaagaactc tttggtcctg ttctgtatgt cctaaagttc
     1381 aagacttttg aagaagctgt tgcaataaac aactcggtcc ctcaaggatt gtctagttcc
     1441 atatttactc gttcacctga acttattttc aaatggatcg gacctcaagg tagtgattgc
     1501 ggtattgtta atgcaaatat accaaccaat ggggctgaaa ttggtggtgc ttttggtggg
     1561 gagaagggta ctgggggcgg tcgtgaagca gggagcgact cctggaaaca gtatatgaga
     1621 cgctcaactt gtacaatcaa ctatgggagc gaattaccac ttgcacaggg gatcaacttt
     1681 ggctagtagg tttactcgcc cggtgtaata tcaggaaatc atgggaaaca cagcattggt
     1741 ggtgcttagt cttaatgctt aactgtttgt aattacgtca tattataaaa caattaaata
     1801 aaggcacatc catttactca tttcagagcg ggtgatgatc tattcgataa ttctaatttt
     1861 gttatatttt gctctattct ccca
//
LOCUS       XM_071829928            1805 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides inosine-5'-monophosphate
            dehydrogenase 2-like (LOC139839774), mRNA.
ACCESSION   XM_071829928
VERSION     XM_071829928.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1805
                     /gene="LOC139839774"
                     /note="inosine-5'-monophosphate dehydrogenase 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139839774"
     CDS             94..1599
                     /gene="LOC139839774"
                     /codon_start=1
                     /product="inosine-5'-monophosphate dehydrogenase 2-like"
                     /protein_id="XP_071686029.1"
                     /db_xref="GeneID:139839774"
                     /translation="MTADFEDGFSATKLFNQGYSYTYDDVIFLPHYIDFPTDSVQLHT
                     KLSRNINLSVPCVASPMDTVTESSMAVSMAALGGIGIIHSNNTISEQSSLIRSAKSHR
                     IPFVDTDIVFVSPDDSISSGDMFDTSRYVFVTENGIKTDRKLLGYVDKEVWKGVTDKE
                     ARVCSYMVKNVVSLPNNYKFEDVAGYLAAKDLDFVPLVSEEGEVVNVVSKSDVERIKG
                     FPKGGLPSIAEDGSFLVGASIGTRETDKERLKHLVKAGVDCIVIDSSQGNSIYQIEMI
                     KYAKNMYPDLDVIGGNVVTMYQAKNLIQSGVDGLRVGMGSGSICTTQEVCAVGRGQAT
                     AVYKVSSVAAQSGIPVIADGGISNSGHIVKALTLGASTVMMGSFLAGSTEAPGTYVYQ
                     GDKRVKKYRGMGSLEAMTKGSDARYLGDTNKLKIAQGVVGAVTDKGSVMKFIPYTMHA
                     VKQGFQDLGASSLQSAHELLRNGTLRLEVRTGAAQIEGGVHGLVSYEKKSF"
     misc_feature    94..1596
                     /gene="LOC139839774"
                     /note="inosine-5'-monophosphate dehydrogenase; Region:
                     PLN02274"
                     /db_xref="CDD:215154"
     polyA_site      1805
                     /gene="LOC139839774"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cagtcactgt cactatcacc ccactatctt cgaccactaa aatttcaatc tgctaaaacc
       61 ctaacaaaac taccaccttc cgccaccacc accatgaccg cagatttcga agacggcttc
      121 tctgcaacta aactcttcaa ccaaggatac tcttacacct acgatgacgt catcttcctc
      181 cctcattaca tcgattttcc cactgattcc gtacaattac acacaaagct atctcgtaac
      241 ataaacttgt ccgtaccgtg tgttgcttct ccgatggaca ccgttactga atcttcaatg
      301 gctgtttcta tggccgcgtt aggtggtatt ggtatcattc actctaacaa caccatttcc
      361 gaacaatcgt cgttgattcg ctctgcgaaa tcgcaccgta tcccatttgt ggatacggat
      421 attgttttcg tgtcgccgga tgattcaatt tcgtccggtg acatgtttga tacatcacgg
      481 tatgtgtttg taactgaaaa tggtataaaa actgatagaa aattgttagg ttatgttgat
      541 aaggaggttt ggaagggtgt aactgacaag gaagctaggg tttgtagtta tatggtgaaa
      601 aatgtcgttt cattacctaa taattataag tttgaagatg ttgctggtta tttagctgct
      661 aaggatttgg attttgtgcc tttagtgagt gaggaagggg aggttgttaa tgtggtgagt
      721 aaatcggatg tcgaaaggat taaggggttt ccgaaaggag ggttgccgtc gattgcggag
      781 gacgggtcgt ttttggttgg ggcgtcaatt gggacgaggg agactgataa agaaaggttg
      841 aagcatttgg ttaaagctgg tgttgattgt attgtgattg atagttctca agggaattcg
      901 atttatcaga ttgagatgat taagtatgct aaaaatatgt atcctgattt ggatgtgatt
      961 ggtggtaatg tggtgacgat gtatcaagct aagaacttga ttcagtctgg tgttgatggg
     1021 ttgagagttg ggatggggtc tggctcgatt tgtaccacgc aggaagtttg tgctgtaggc
     1081 cgtggacagg cgactgcggt gtacaaggta tcgtctgttg ctgcacaaag tggtattccg
     1141 gttatagctg atggtggtat ttcgaattct ggacatattg tcaaagcttt gactttaggg
     1201 gcatcaactg ttatgatggg aagtttctta gcaggaagta ctgaagctcc tggaacatat
     1261 gtttatcagg gtgataagcg ggttaaaaag taccgtggta tgggatctct cgaagcgatg
     1321 acaaaaggaa gtgacgctcg atacctaggc gacacaaata aattaaaaat tgctcaggga
     1381 gttgttggag cagttacaga taaaggttct gtaatgaagt ttattccgta caccatgcat
     1441 gccgttaagc aaggttttca ggatctcggt gcttcttctt tgcaatctgc tcatgaattg
     1501 ttgaggaacg ggaccctcag gctggaggtg cgaactggag cagcacagat tgaaggagga
     1561 gttcatggcc tcgtgtctta tgaaaagaaa tccttctaac catttcgata tttgaaacgg
     1621 gagcttgatg caaagtcaag ggtgtacaag cagtgtgttc aaaattatta tcagtcatca
     1681 gtacttgttt aatataaccg ggaaaaatgt tacccctcaa ttatctgttt cactaaactt
     1741 aaactatagg tgcctcataa agtggtaacg tttttatatt atcttaaaac tgttatttgt
     1801 tttta
//
LOCUS       XM_071829929            2770 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839775), mRNA.
ACCESSION   XM_071829929
VERSION     XM_071829929.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2770
                     /gene="LOC139839775"
                     /note="uncharacterized LOC139839775; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839775"
     CDS             264..2201
                     /gene="LOC139839775"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686030.1"
                     /db_xref="GeneID:139839775"
                     /translation="MSPASKSKSKDKRAAVKDPQKPSTKPTSNANTGVPASGYNPFSG
                     TFHTLDDTEDHIGMGVEYDSISNNGSWSGESEDHKDKTTQGSVRQETNLGVDNDKREK
                     IRQKNEKKHQRQKERRAQELHEKCNGYLMSRKLESLAQQLVAMGFSSERATMALILNE
                     GRVEQSVNWLFEGGEDADNQRAQNLDGGGGNLKIDISEERAQITQMEIKFKCSKQEVE
                     RAIVACEGDLEQAAETLKVQKQEQPPAAPPKLEESGNVKLSIAMSPNTSTSRTISKSI
                     PVHVQQKTDDRDFNYTKTVVTVGPTSTDPGIKGLQLLKKTPPNSDWTKQQQIAPPAVD
                     KRWPVTVGGSNPSVSYSLASPLQPPPQAKTDSRYANIGPELKNLQLGSVREPVVVMQR
                     PKSKNMPTSVSLSSSASVADWHPNSEPVMSMNSNGFSHVSSSSRGFNTPSYVNNSQFY
                     DQIYHQQHQQSVPHQHYASSSGPLDHHLGQPGSMNHFSNGGMWNNRMVGPSTTPTLAA
                     ASSLGLFSGLGSNGSSGPSSPVDWNACDTLQFDYTNIDWSLDRLPSRPNGMWAGFGSS
                     TSSADLYGSGMGGGKTATRPPTGIVSNGNALGVHHHDVVGVVGSEASSATGGGSREWT
                     SPFEEKELFTFTRQFVSSPSL"
     misc_feature    678..785
                     /gene="LOC139839775"
                     /note="UBA domain-like superfamily; Region: UBA_like_SF;
                     cl21463"
                     /db_xref="CDD:473871"
ORIGIN      
        1 cgctttgaac tagtctttgc ttggctgaaa atggtgtgtt ttacttgcta aggggctgct
       61 gtgtttgcct tgtgtaccta tcaaacaatg tcttgtgagc tagcatggct gaaaatgcac
      121 cttttgttct tcacaatact gttgcgacga tattgatctt tgtgaataat cttcgatgaa
      181 ggaaatattt atagagatcc atgggtaaca taactatcac aacgtctcac tcatacaaat
      241 cggcaattta gctggaattc acaatgtctc ctgcatcgaa gtcaaagtca aaggacaaaa
      301 gggctgctgt caaggacccg caaaagcctt ctaccaaacc cacctccaat gctaatacag
      361 gtgtccctgc tagcggatat aatccgtttt caggaacctt tcatacactt gatgatacag
      421 aggaccatat tggaatgggg gtcgaatacg attctatatc taacaatggt agttggtcag
      481 gtgaatctga agatcataaa gacaaaacta ctcaaggttc ggttcgtcaa gaaactaact
      541 tgggggttga taatgacaaa cgtgaaaaga ttcgtcaaaa aaacgagaaa aaacatcaac
      601 gccaaaagga gagacgagct caagaactgc atgaaaaatg taatggttat ctaatgtcta
      661 gaaagctaga atcacttgca caacagcttg ttgcaatggg attttcatcc gaacgtgcaa
      721 caatggctct tatattgaat gaaggtagag tagagcaatc agttaattgg ttatttgagg
      781 gtggtgaaga tgcagataat caaagggccc aaaaccttga tggaggtggt ggtaacttga
      841 agatcgacat atcagaagaa cgtgcacaga ttacccaaat ggaaataaag ttcaaatgct
      901 caaaacagga ggttgagcgt gctattgttg cctgcgaagg tgatcttgaa caggcggcag
      961 aaaccttaaa agttcagaaa caggaacaac cgcctgctgc cccaccaaag cttgaagaaa
     1021 gtggtaatgt taagctttct atagcaatga gtccgaatac ttcaacatca agaacaatat
     1081 caaaatctat acctgtacat gtacagcaga agacagatga tagagatttt aattacacaa
     1141 aaacggttgt tacagtagga cccacatcaa cagatcctgg gatcaaaggt ttacagttgc
     1201 taaagaaaac tccacccaat tctgattgga caaaacagca gcaaattgct ccgccagctg
     1261 tcgataagag gtggcctgtt acggtaggtg gatcaaaccc ttctgtttct tattctttag
     1321 cttctccctt acagccacca ccacaagcca aaaccgattc ccgatatgcg aacattggac
     1381 ccgagttaaa aaatctccag ttaggatcag tgcgggaacc ggttgttgtg atgcaacggc
     1441 ccaaatcaaa aaacatgccc acaagcgtaa gcctgtcctc gtcagcatct gttgctgatt
     1501 ggcatcctaa tagtgaaccg gtaatgagta tgaattcgaa cgggttttca catgtttcca
     1561 gtagctcaag aggctttaat accccaagct acgtcaataa ttcccagttt tatgaccaga
     1621 tatatcatca gcaacatcaa cagtcggttc cacatcagca ttatgcttca agcagcggcc
     1681 cgttggatca tcatttgggt caacccggtt ccatgaacca tttcagcaat ggtggcatgt
     1741 ggaacaacag gatggtgggt ccgagcacca ctcctaccct ggcagctgct tcgtctctcg
     1801 ggcttttctc tgggttgggt tcaaacgggt catcaggacc gtcatctccg gttgactgga
     1861 atgcatgtga cacgttgcag tttgattaca caaacataga ctggagtcta gatcgtcttc
     1921 cgtcaaggcc aaacggtatg tgggcgggtt ttggatcttc aacaagctct gcagatcttt
     1981 atggatcggg aatgggtggt ggtaagaccg ccacgagacc gccaacgggg attgtatcaa
     2041 atgggaatgc gttgggtgtg catcatcatg atgtggtagg ggtagtaggt tctgaagcat
     2101 cgtctgcaac aggtggtggt tctcgtgaat ggacttcgcc atttgaagag aaagagttgt
     2161 ttactttcac cagacagttt gtttcttctc cctctcttta atgaaagaaa aaaacatgat
     2221 gaacaaataa tatgataggg atgaaaaaac aataaaaaaa aaacagaact tgaaaacatg
     2281 tgttggaatt taatgtttct cttcgttttt tcaatcacgc gttgctgctt gtttgtatgt
     2341 gcttgttcta tttgcttctg atattgtcgg gcaatggagt atcattcttt tcttgaatcc
     2401 aaattcacaa attaagatcc atcgtttcta tatctatatc tgtacattat tcacattaga
     2461 aactctacgg gatttagcaa gtccggctgc agaaaaggcg ctactctttt gcctcgtttt
     2521 catattctgt ttccttaatt tttgtaaagt cagatgattg tctttaggct atataagtct
     2581 catggaagtt tgaaaaaaaa aaaaatctaa gcgatggccg actcgatacg tctcaaaaca
     2641 ctgcgaattc aaagagctat acattttcaa aaacagtaca ggaaatgtat atgcttaaac
     2701 ataagaaatc acgcgcacgt tgtagcttct cacctggatc acaaactatg taacgaaatc
     2761 aaaacgatgc
//
LOCUS       XM_071829931             369 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cysteine proteinase
            inhibitor A-like (LOC139839776), mRNA.
ACCESSION   XM_071829931
VERSION     XM_071829931.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..369
                     /gene="LOC139839776"
                     /note="cysteine proteinase inhibitor A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839776"
     CDS             1..276
                     /gene="LOC139839776"
                     /codon_start=1
                     /product="cysteine proteinase inhibitor A-like"
                     /protein_id="XP_071686032.1"
                     /db_xref="GeneID:139839776"
                     /translation="MAVAGGIIDQSNKTSADIEPFARFAIEEHNKKENRALEFVKVVS
                     TKEQVVQGKMYYITIEVNEGGETKTYEAKVWVKPWEDFKQLHEFNLV"
     misc_feature    order(13..15,142..150,154..156)
                     /gene="LOC139839776"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     misc_feature    49..273
                     /gene="LOC139839776"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; Region: CY; cl09238"
                     /db_xref="CDD:447698"
ORIGIN      
        1 atggccgttg ctggaggaat tattgatcag tctaataaaa ccagcgctga catcgaaccg
       61 tttgctcgat ttgccattga agaacacaac aagaaggaga atagagctct ggagtttgtg
      121 aaggtagtga gtaccaaaga gcaagtagtg cagggtaaga tgtactatat cacaattgaa
      181 gttaatgaag gtggtgagac taaaacttat gaagccaaag tttgggttaa gccatgggaa
      241 gacttcaaac aactgcatga gtttaacctt gtttgatcct gcaacttagt ttccatctat
      301 ttgtgatcca ggtgagaagc tacaacgtgc gcgtgatttc ttatgtttaa gcatatacat
      361 ttcctgtac
//
LOCUS       XM_071829932            2946 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pentatricopeptide
            repeat-containing protein At1g69350, mitochondrial (LOC139839777),
            mRNA.
ACCESSION   XM_071829932
VERSION     XM_071829932.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2946
                     /gene="LOC139839777"
                     /note="putative pentatricopeptide repeat-containing
                     protein At1g69350, mitochondrial; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839777"
     CDS             131..2491
                     /gene="LOC139839777"
                     /codon_start=1
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g69350, mitochondrial"
                     /protein_id="XP_071686033.1"
                     /db_xref="GeneID:139839777"
                     /translation="MSIIFRRTSIFSGKPKLFQVHQSFSTTPHQYDHTNAILPLCNST
                     ISLHQTKQSHAIAITTGYLPTSITISAALILQYATFQNPSSSHILFHQSLPYSNSSFL
                     YNTVIRAYSIAGVYNGFQVYNLMMRNGVKPDDHTYPFVLKVCTDYNEVPKGKEVHGAV
                     WKSGFGSDVFVGNTLLRFYGECCGVGDAEKVFDKMSKRDVVSWNTLISVCSVVGCNNK
                     AIELFKEMRFGSRSGCFEVEPNVVTIVSLLPVCAAIEDCVMTNEVHGYAVKMGFGSYV
                     TINNAFIDAYGKCGDLKSCKQGFDEMVERNDVSWNAMITSFSHMDRQQDGMDFFRSMV
                     EKNVVPNSVAVSSMLPILVELECLQWGIELHGFSIRIGMDSDIFVANSLLDMYAKFGY
                     SAKASNVFKNIESKNIVSWNALVANYAQNGFETLALHVVREMQDYGQVPGAVTLTNVL
                     PACARIGIVTHGKQVHARSIRMGYACQLFISNALIDMYAKCGHLDLARKVFDISCKDR
                     ISYNTLISAYSHTNTSFESLVLFCELLSKGLKPDTISFASALSACANMAEIKNGKEIH
                     GVCVRTLFHNHLIVSNSVMDLYTKCGRIDLAQKVFDRIPNKDVASWNTMIMGYGMRGE
                     LDTAISLFEVMKNDHHVKCDSITYIAVLSVCSHGGMVDLGRKYFTEMKEDNVEPTQTH
                     YACMVDLLGRAGLMDEAVEMINGSETELDANAWGSLLGACRIHGNIELGQWASQHLFK
                     LKPGHSGYYTLLSNMYAEAGRWNEADNIRGLMKLRGVKKNPGFSSL"
     misc_feature    425..541
                     /gene="LOC139839777"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    434..514
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    497..2482
                     /gene="LOC139839777"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    530..724
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    728..811
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    968..1045
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1049..1138
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1259..1348
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1358..1441
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1457..1546
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1574..1648
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1658..1741
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1757..1951
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1961..2044
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2063..2152
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2168..2242
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2363..2449
                     /gene="LOC139839777"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tcgagagcaa gtagagggga aaaagagtgg tataaattaa ttttaattta ttggtcttaa
       61 tcatcggtct taatcaacta cagcctacct ttcctaattt cttttcttcc gatgcaaaag
      121 caattgttct atgtccatca tattccggcg aacctccata ttttccggca aacctaaact
      181 atttcaagta caccaatcat tctccacaac cccacaccaa tacgatcata ccaacgcaat
      241 cctcccacta tgcaattcca caatatcact ccaccaaacc aaacaatcac acgccattgc
      301 aatcaccacc ggctacctcc caaccagcat caccatctcc gccgctttaa tccttcaata
      361 cgccaccttt caaaacccat catcatctca cattctattt caccaatcac tcccttactc
      421 gaattcttct ttcttataca acaccgtgat tcgagcttac agtattgctg gagtttacaa
      481 tggctttcaa gtttataact tgatgatgag aaatggtgtt aaacctgatg atcatactta
      541 cccatttgtg ttgaaggtat gtacggacta taatgaggtg ccgaagggga aagaggttca
      601 tggggcggtt tggaagtcgg gttttgggtc ggatgtgttc gttgggaata cattgttgag
      661 gttttatggt gaatgttgtg gtgttggtga tgcggagaag gtgtttgata aaatgtctaa
      721 gagagatgtt gtgtcgtgga acacgcttat ctcagtgtgt tcggtcgtgg gttgtaacaa
      781 taaggctatt gagttgttta aggagatgag atttgggtcg agatcggggt gttttgaggt
      841 tgagccgaat gtggttacga ttgtgagttt gttgcctgtt tgtgcggcga ttgaggattg
      901 tgtgatgacg aatgaggtgc atggttatgc tgtgaagatg ggatttggta gttatgtaac
      961 gataaacaat gcttttatcg atgcgtatgg taaatgtggt gatttgaagt cttgtaaaca
     1021 gggttttgat gaaatggttg agaggaacga tgtttcttgg aacgctatga tcacaagttt
     1081 ttctcacatg gatcgtcaac aagatggtat ggatttcttc aggtcgatgg tcgagaaaaa
     1141 tgtcgtacca aactctgttg cagtttctag tatgctccca attttagttg aactagaatg
     1201 tcttcaatgg ggaatagagc ttcatggatt tagtattaga ataggtatgg attcggatat
     1261 ctttgtagcc aattctttgc tagatatgta tgctaaattc ggatattcag ccaaggcatc
     1321 gaatgtattc aaaaatattg agtcgaaaaa tatagtatct tggaatgcac tagtggctaa
     1381 ctatgctcaa aacggctttg agacgttagc tttacatgtg gtacgagaaa tgcaagatta
     1441 tggtcaagtc ccgggagctg tgaccttaac gaacgttctt ccagcttgtg cacgaattgg
     1501 gattgtaacg cacggtaaac aagtacacgc aagatctatt cgaatgggtt acgcttgtca
     1561 actattcatc tcgaacgcac tcatagacat gtatgcgaaa tgcggtcatc tagatcttgc
     1621 aagaaaagtt tttgacatat cttgtaaaga tagaatttca tataacacac taatctctgc
     1681 gtattctcat acaaacactt cattcgagtc tctggttttg ttttgtgaat tgttgtcaaa
     1741 agggctaaag cccgatacta tatcgtttgc tagtgcactt tctgcttgtg ctaatatggc
     1801 agaaatcaag aacggtaagg agattcacgg ggtttgtgta aggaccttgt ttcataacca
     1861 tcttattgtt tcaaactcgg ttatggatct ttacaccaaa tgtggacgca ttgatcttgc
     1921 tcaaaaagta tttgatcgga tacctaataa ggatgtggct tcatggaaca cgatgattat
     1981 ggggtatgga atgcgtggtg aactcgacac agcaattagt ctatttgaag taatgaaaaa
     2041 tgatcatcat gtgaaatgtg attcgatcac ttacattgca gttttatctg tttgtagcca
     2101 tgggggaatg gttgatttag gaagaaagta ttttacagaa atgaaagaag ataatgttga
     2161 accaacacaa acacactatg cgtgtatggt tgatcttttg ggccgggctg ggctcatgga
     2221 tgaggctgta gagatgataa atgggtcaga aactgaactt gatgctaatg catggggttc
     2281 tttgcttgga gcttgtagaa ttcatggaaa tattgagttg ggacaatggg caagtcaaca
     2341 tcttttcaag ctaaaaccgg gtcattcggg ttactacaca ttgctttcga atatgtatgc
     2401 agaagctggg agatggaacg aagctgataa cattagagga ttgatgaagc taaggggagt
     2461 taaaaagaac cctggtttta gtagcttata atactcgtat aatttaaact tgtcttataa
     2521 acacctgaga tctcaattac aagacattgt tacgtgtata atagttataa aactgaataa
     2581 atctgacaat ctgatcacaa aacttgaaaa aataaaaaat aaaccaagac caaatgctat
     2641 gatgggtgac atataacagc cctacaatgg gattcagcat ctataatcca cgaccctaaa
     2701 ctttcaagtc tagtttgaac tagatcagaa cgcgtatccg aagaccaaaa cgtaaacctg
     2761 gtgttgttct ttaacgacgt tacattatcg ttaccttcat caatttttat accaaatcca
     2821 ccctcatcaa tcctatgtaa cttaacacct tttgtctcga gtaactttac tgcgaaagat
     2881 acaaaactac tctcatcttt gttcgttttg tggtccacca ttagtgccat ctcgttcacg
     2941 aaatga
//
LOCUS       XM_071829933            2039 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839778), mRNA.
ACCESSION   XM_071829933
VERSION     XM_071829933.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2039
                     /gene="LOC139839778"
                     /note="uncharacterized LOC139839778; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839778"
     CDS             42..1898
                     /gene="LOC139839778"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686034.1"
                     /db_xref="GeneID:139839778"
                     /translation="MNLFNLKTTPKRGLGLGFYALFIIVSISILFIFSVYRSSSISIS
                     SSPPLTQFELKNTDLNKNPKFTFTIKVLTYDRLPSLTRCLRSLAAAHYDDEKVNIHVY
                     IDHFKVVDQKDEYLDQKLNEYKEILDFVDGFEWKFGEKMVHYRTGNVGLQAQWLEAWW
                     PVSDDEFAFVVEDDIELSPLYYRFLKGLIENYYYNASNYSPWIYGASLQRPRFVPGKH
                     GNKIQLDKDRQVFLYQLVGTWGQLLFPRPWKEFRLWYDTHKTKGVKPILDGMVTTGWY
                     LKMGDRIWTPWFIKFIHARGYFNIYTNFKHESALSVSHRDAGVNYGKTAGPDSNLIQE
                     TFPFKLEPLTNLKWYNFCFKEIVPDRVVKSVSELKPVLESIQKANTLVIVNLFQTSEM
                     FIQNLVCHFERLDIRNYIFVGPESDFLFDLSRRGHPVINVDKFFDSIKEHKSTKFGKE
                     IIVNAYVIKKALEMNYDTLVFDYNVLPVNADLFLNSVKRDSSVDFYVEKQLGFLFARS
                     SGSKIWTDHFVNEMALMVDHKTNKDESSFVSFAVKLLETKGVKLHRIDEGGFGIKIDE
                     GNDNVTSLKNNTRFTFWSSDTRSDLVQTRLESLGSWIIDAESHCRAVICHPS"
ORIGIN      
        1 tcgcattaat gaatcgatta tgatacgtgc ctttattcaa catgaattta tttaatctca
       61 aaacgacacc aaaaagaggg ctagggttag ggttttacgc tttattcatc attgtatcta
      121 tatcaattct attcatattc tctgtctacc gttcttcttc aatttctatc tcatcatcac
      181 ctccgttaac tcaatttgag ctcaaaaaca cagatttgaa caaaaaccct aaatttacct
      241 tcacaatcaa agtcctgacc tatgatcgcc tgccgtcact cacgcggtgc ttacgatcac
      301 ttgctgcagc tcattatgat gatgaaaagg tgaatattca tgtgtacatt gatcatttta
      361 aggttgtgga tcaaaaggat gagtatctgg atcagaaact gaatgaatat aaggaaatac
      421 ttgattttgt tgatggattt gagtggaagt ttggggaaaa gatggtgcat tatcggaccg
      481 ggaatgttgg attgcaggca cagtggttgg aagcttggtg gccggtttct gatgatgagt
      541 ttgcgtttgt ggttgaagat gatatcgaat tgtcaccgtt gtattatagg tttcttaagg
      601 gtttaattga gaattattat tataatgctt cgaattatag tccctggata tacggagctt
      661 ctttgcaacg gccaaggttc gtaccaggta agcatgggaa caaaatacag ttagacaaag
      721 atagacaagt tttcttgtat cagttagttg gtacttgggg tcaacttcta tttccgagac
      781 cctggaagga gtttcgttta tggtacgaca cacataaaac caaaggcgtg aaacccattc
      841 ttgatggcat ggtcacaact ggatggtacc taaaaatggg ggacaggata tggactcctt
      901 ggtttattaa gtttattcac gcccgaggct atttcaacat atacacgaac ttcaaacacg
      961 agtcagcact cagtgtatct catagagatg cgggtgttaa ctatggaaaa acagcgggac
     1021 ccgattcgaa tctgatacaa gaaacttttc ctttcaaatt agagccgtta acaaatctca
     1081 agtggtataa tttctgtttt aaagaaattg ttcctgatag agttgtgaag agtgtctctg
     1141 aactcaagcc cgttcttgaa tcgattcaaa aggcgaatac tttagtgatt gtgaacttat
     1201 ttcaaacatc agagatgttt atacaaaact tggtgtgtca ctttgaaagg cttgatattc
     1261 gtaactacat ctttgtcggt cccgaatctg attttttgtt tgatctttca agacgtgggc
     1321 acccggttat taatgtagat aagtttttcg acagcattaa ggaacacaaa tcgactaaat
     1381 ttggaaagga gattatagtg aatgcgtatg ttattaagaa ggctttggaa atgaattatg
     1441 acacgttggt gtttgattat aacgtgcttc ccgttaatgc tgatttattt cttaactcgg
     1501 tcaaacgtga ttcaagtgtt gacttttatg ttgagaagca actcgggttt ctctttgcta
     1561 ggagttcagg atctaaaatt tggactgatc atttcgtgaa cgagatggca ctaatggtgg
     1621 accacaaaac gaacaaagat gagagtagtt ttgtatcttt cgcagtaaag ttactcgaga
     1681 caaaaggtgt taagttacat aggattgatg agggtggatt tggtataaaa attgatgaag
     1741 gtaacgataa tgtaacgtcg ttaaagaaca acaccaggtt tacgttttgg tcttcggata
     1801 cgcgttctga tctagttcaa actagacttg aaagtttagg gtcgtggatt atagatgctg
     1861 aatcccattg tagggctgtt atatgtcacc catcatagca tttggtcttg gtttattttt
     1921 tattttttca agttttgtga tcagattgtc agatttattc agttttataa ctattataca
     1981 cgtaacaatg tcttgtaatt gagatctcag gtgtttataa gacaagttta aattatacg
//
LOCUS       XM_071829934            1812 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides casein kinase 1-like protein
            10 (LOC139839779), mRNA.
ACCESSION   XM_071829934
VERSION     XM_071829934.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1812
                     /gene="LOC139839779"
                     /note="casein kinase 1-like protein 10; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 50 Proteins"
                     /db_xref="GeneID:139839779"
     CDS             421..1797
                     /gene="LOC139839779"
                     /codon_start=1
                     /product="casein kinase 1-like protein 10"
                     /protein_id="XP_071686035.1"
                     /db_xref="GeneID:139839779"
                     /translation="MDNVIGGKYKLGRKIGSGSFGVLFLGVNVQSGEEVAVKLESMKT
                     KHPQLHYEAKLYMLLQGGTGVPHLKWIGVEGEYNAMVIDLLGPSLEDLFNYCNRKFTL
                     KTVLMLADQLISRVEYMHSRGFLHRDIRPDNFLMGLGRKANQVYIIDYGLAKKYRDLQ
                     THKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA
                     GTKKQKYDKISEKKMLTPIEMLCKSYPTEFISYFHYCRSLRFDDKPDYSYLKRLFRDL
                     FIREGYQFDYVFDWTILKYPQVGSGSSSRGRTVGKLPLNPGPSAERAEKTSVRPEGRD
                     RVSGPVEAFARRNGDHSRHRSSEHATPSKELHGDSDRARIMRTSSTSKRAVISSSRPT
                     SSGEPTDSRLNRLGSGSGRISTTQRLHSQPGFESKSSSFTRAVPSSRSGRDDAIRSFE
                     LLTIGKRK"
     misc_feature    442..1266
                     /gene="LOC139839779"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinases, Casein Kinase 1 delta and epsilon; Region:
                     STKc_CK1_delta_epsilon; cd14125"
                     /db_xref="CDD:271027"
     misc_feature    order(463..483,487..489,526..528,532..534,664..678,
                     682..684,688..690,802..804,808..810,814..819,823..825,
                     865..867,874..876,943..954)
                     /gene="LOC139839779"
                     /note="active site"
                     /db_xref="CDD:271027"
     misc_feature    order(463..483,487..489,526..528,532..534,664..678,
                     808..810,814..819,823..825,865..867)
                     /gene="LOC139839779"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271027"
     misc_feature    order(475..477,682..684,688..690,802..804,808..810,
                     814..816,874..876,943..954)
                     /gene="LOC139839779"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:271027"
     misc_feature    order(862..894,898..954)
                     /gene="LOC139839779"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:271027"
     misc_feature    <1543..1719
                     /gene="LOC139839779"
                     /note="Region: dermokine; cl42387"
                     /db_xref="CDD:455732"
ORIGIN      
        1 caaaacccct gaaacccatt tcagtttctc cttgatttct tttattagaa attgatcact
       61 tgttaattaa cttcaaatcc tgtataattt tgctatgcat tatctcaatt taatcagttc
      121 tgtgataaat tttgcatctt tatcactttc agggcacaat ttataagatt tgttagtggt
      181 gtaatatcta gggtttcaaa tttttttggc actggtagat atttttagtt caattgtgta
      241 aaaatttgaa cttgtatcaa aattaggtgt aaaggttatc ttttttgaag attttttgct
      301 tagggttttg atggatctga gtgcattttt gatatcttgg atttttgttg cactgaattt
      361 tgtgaaataa agttaagtta actgaatttt tttgagggtt tatttgaatt ttatttaatt
      421 atggataatg taattggtgg gaagtataag cttggtagaa agattggcag tggatctttt
      481 ggagtacttt ttttgggagt aaatgttcaa agtggagaag aagtggctgt gaagctggaa
      541 tctatgaaga caaaacaccc ccaacttcat tacgaggcta aattatacat gcttctacaa
      601 ggaggaacgg gtgtacctca tcttaaatgg attggagttg aaggcgagta caacgctatg
      661 gtcatcgatc ttcttggacc aagtttagaa gacttgttta attattgtaa tcggaagttc
      721 actttaaaaa cagttttgat gcttgcggat cagttgataa gcagagttga atatatgcat
      781 tctagaggtt ttcttcaccg tgatataagg cccgacaact ttttgatggg tctaggacga
      841 aaggctaatc aggtttacat aatagattat gggcttgcaa aaaagtacag ggatcttcag
      901 acacacaagc atataccgta cagggaaaat aaaaatctta ctggtactgc tcgttacgcc
      961 agtgttaata ctcaccttgg gattgaacaa agcagaagag atgatctaga atctcttggt
     1021 tatgtgctca tgtatttctt aagaggaagc cttccttggc aggggctgaa agccgggact
     1081 aagaagcaga aatacgataa aattagtgag aaaaagatgc tcactcctat agagatgcta
     1141 tgcaagtctt atcctaccga attcatatct tattttcatt attgtcgttc attgcggttt
     1201 gatgacaagc ctgattattc atatttgaaa aggctttttc gggatctttt cattcgagaa
     1261 ggctatcagt ttgactatgt ttttgactgg accattttga agtatcctca agttggttca
     1321 ggttccagct ctagaggacg gacggttgga aagctaccac tgaatcccgg gccttcagca
     1381 gaaagagcag aaaaaacttc agtgagaccg gagggtcgag atagagtgtc gggcccagtt
     1441 gaggcttttg ctaggcgcaa tggtgatcac tcgagacacc gatcttcgga acatgcaacg
     1501 ccgtccaaag aactgcatgg tgattcagat agagctcgca tcatgagaac cagtagtact
     1561 tcaaaaagag cagtcatatc gagcagcaga ccaacctcat ccggcgaacc cactgacagc
     1621 cgattaaacc gtctaggttc aggcagtggt cgcatatcga ccactcaaag gctccactct
     1681 caacctggat tcgagtccaa gtcatcatct ttcacaaggg ccgtaccctc atcaagaagt
     1741 ggtcgtgatg atgctattcg aagctttgag ctgctaacta ttggcaagag gaaatagaaa
     1801 gtcgtttata tg
//
LOCUS       XM_071829935            1388 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides monooxygenase 1-like
            (LOC139839780), mRNA.
ACCESSION   XM_071829935
VERSION     XM_071829935.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1388
                     /gene="LOC139839780"
                     /note="monooxygenase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839780"
     CDS             47..1234
                     /gene="LOC139839780"
                     /codon_start=1
                     /product="monooxygenase 1-like"
                     /protein_id="XP_071686036.1"
                     /db_xref="GeneID:139839780"
                     /translation="MDNSNDQVVIIGAGICGLATAVALDKKGIKSLVLEKSKSLRNDT
                     GTAIGIWNNGWQALHQLGVADILRRSAVNCPRQRIVSLNEGKQEEGSTNGEFRAVLRK
                     DIIDSLYNALPSDTVKFGCQLETIKLDQNTNKPVLRLADGTSIIPKVVIGCEGGKSVV
                     AEFFNPKPTKMFPLCGIRGLTTYPDGHPFDHEFVRFRKDNILVGRIPMTDTLVYWFCA
                     HPYILKDRRIWEDQEVIRQTTMEWVSDFPKEVQEMIEKTDTKALSFARLRYRTAWDLL
                     TGTFSKGTVTVAGDAMHVMGPFLGQGGSAGLEDAVVLARNMGQLGLNDEGKLMVQGVG
                     EAFKMYVKQRRMRVVKVSLQTYLTGMLLGAASRLEKVMYFVLLSLLFSNPVGHTDYDC
                     GVL"
     misc_feature    65..1207
                     /gene="LOC139839780"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion]; Region:
                     UbiH; COG0654"
                     /db_xref="CDD:440419"
     polyA_site      1388
                     /gene="LOC139839780"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttaaattcga gaagggaaaa aaaagattgg aaaaaggcat ttggatatgg ataatagcaa
       61 tgatcaagtg gtgataattg gagcaggtat ttgtgggttg gcaacggctg tagctcttga
      121 taaaaaagga ataaaaagtc tagtactgga gaaatccaag agtctgagaa acgacaccgg
      181 aactgcaatc ggaatctgga ataatggctg gcaagctctc catcaactcg gtgtcgccga
      241 catcctccgt cgctctgctg ttaactgtcc aaggcaacga attgtatcgc ttaacgaggg
      301 gaaacaagaa gaaggctcaa cgaatggtga atttcgtgcc gtattgagga aggatattat
      361 tgactctctt tataatgccc ttccttcgga cactgttaaa tttggttgcc aacttgaaac
      421 cataaaattg gatcaaaata ctaacaaacc agttcttaga ttagctgatg gaacttcaat
      481 catccccaag gttgtaattg gttgtgaagg aggcaaatca gtcgttgccg aatttttcaa
      541 cccaaagcca acaaagatgt ttccgttatg tggaatcaga ggtttaacga cttatccaga
      601 tggtcatccg ttcgaccatg agtttgttcg tttcaggaaa gacaacatcc tcgtgggacg
      661 aattccaatg actgatactt tggtttactg gttttgtgca cacccctata ttcttaaaga
      721 tagaagaatt tgggaagatc aagaggtgat tcgtcaaaca accatggagt gggtaagcga
      781 ttttcccaaa gaagttcaag aaatgatcga aaaaaccgac acaaaagcgt tatcttttgc
      841 acgtttaaga tatcgcacag catgggactt gttaacgggg acatttagta aaggtactgt
      901 tacagttgct ggtgatgcaa tgcatgtgat gggtccgttt ttgggtcaag gtggttcagc
      961 agggttagaa gatgcagtcg tgctggctag aaatatgggt caattgggtt tgaatgatga
     1021 gggaaagtta atggtccaag gagttggaga agcgtttaag atgtatgtta aacaacgaag
     1081 gatgagggtg gttaaagttt cgttgcaaac ttacctcacc ggcatgcttt tgggtgctgc
     1141 ttcgcgtcta gagaaggtca tgtatttcgt gttgttgtct cttctcttta gcaacccagt
     1201 tggtcatact gattatgact gtggtgttct ttgatgcgtt agtttgtgag tcgtataata
     1261 actatggtct tgggcttaaa cgtgtttaca gataaattca gggcaaagat aattataagt
     1321 tgtgtaatgc attggattat gtaagtttga ttgtatatgt aagcattact tattattttc
     1381 agtttgta
//
LOCUS       XM_071829936            5813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like
            (LOC139839781), mRNA.
ACCESSION   XM_071829936
VERSION     XM_071829936.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5813
                     /gene="LOC139839781"
                     /note="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 27 Proteins"
                     /db_xref="GeneID:139839781"
     CDS             408..5459
                     /gene="LOC139839781"
                     /codon_start=1
                     /product="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like"
                     /protein_id="XP_071686037.1"
                     /db_xref="GeneID:139839781"
                     /translation="MDAPEKPLSNLIGNLRSWIPRRSEPENVSRDFWMPDQSCRVCYE
                     CDSQFTLFNRRHHCRLCGRVFCAKCTQNWIPTRSSNKNIFREDSEKIRACNYCFKQWQ
                     QGGLATSVDHGVQDSSLDLSTSPSAASLISTKSSCTGDSSSITFTSVPHSGCSYHQSV
                     VMETNIDEQNELAARSNDLLLDVAAQSPSHYGCLINRGDDFDEEYAYQLAAAGGRHLL
                     QVENGYYDELQMDDIDNDYESHKVYSDEQPADAKSASSCSLQDVQQLEKKGDTQDSRD
                     EGEASSSLYAAQSVQEPVDFENNGVLWLPPEPEDEEDEREALIFDDDDYEGDAAGEWG
                     SSSNLGSGECRNREKSNEEHKRAMNTVVDGHFRALISQLLQVDNLLDNDEDDKDSWLE
                     IITSLSWEAASLLKPDTSKGGGMDPGGYVKIKCLASGLRSDSMVVKGVVCKKNVAHRR
                     MTSRIEKPRFLILGGALEYQRVSNHLSSFDTLLQQEMDHLKMAVAKIDAHQPDVLLVE
                     KSVSRYAQEYLLAKDISLVLNIKRPLLERIARCTGAQIVPSIDRLSSQKLGYSDLFHV
                     ERFQEEHGSAGQGGKKLVKTLMYFEGCPKPFGCTVLLRGASGDELKKVKHVVQYGVFA
                     AYHLALETSFLADEGASLPELPLNATLTVALPDKVSNIDRSISTIPGFTTPTNDKPQV
                     HQPCIDRTETHSVSMSEMFSSIMEQKPEVGPNTSKPNSLLLSSKLKVPQGTVGTSAPN
                     GFEPPLAQVDKGKCMNGVDPAVSDGSSLLLVGKNGKEDDSTSKEEFPPSPSDHQSILV
                     SLSSRCVWKGTVCERSHLFRIKYYGNFDKPLGRFLRDDLFDQGYRCRSCEMPSEAHVQ
                     CYTHRQGTLTISVKKLPEFLLPGEKEGKIWMWHRCLRCPRTCGFPPATRRIVMSDAAW
                     GLSFGKFLELSFSNHAAANRVASCGHSLHRDCLRFYGFGKMVACFRYASIDVHSVYLP
                     PHKLEFKYENWEWIQHEVNEVIRRSESLFAEILNVLSQMADKRRQVTDLKVMLRKEKA
                     EFEDSLQKILNHEVKNGQPIIDILEINRLRRQLLFQSYVWDHRLVYASNVDSNSPKPN
                     VNDLEPELEDKNDETFVDSKSVIDSCNISDVGEVDNIGKESEVDAYSSPIEENYPPDS
                     LLPNLSVRRAVSEGQFPVMASLSDTLDAAWTGNHPECSILSDLDLNDCNKLEKGDRMD
                     ESKTSSLLSPVLSTKGSETIEDSSSWLGMPFLNFYRSLNKNFSATSQKLDTLNGYKPV
                     YISSFRESELQGGARMLLAVGFNDTVIPVYDDEPTSIISYALLSPDYISQVSDEFDRI
                     KDSGESQSMFFSQSADTSSFQSSSNFDGMSVGDDSILSMSGSRSSLMPDPLSQTKSLH
                     SRVEFTDDSLLGKVKYAVTTYYAKQFEALRRICCPSEMDYIRSLSRCKKWGAQGGKSN
                     VFFAKTLDDRFIIKQVTKTELESFIKFAPAYFKYLSESIGTGSPTCLAKILGIYQVTK
                     QMKGGKETKMDVLIMENLLFGRNLSRLYDLKGSSRSRYNADSSGSNKVLLDQNLIEAM
                     PTSPIFVGNKAKRLLERAVWNDTAFLASVDVMDYSLLVGVDEEKHELVLGIIDFMRQY
                     TWDKHLETWVKASGILGGPKNASPTVISPKQYKKRFRKAMTTYFLMVPDQWSPPTIIR
                     SLSQTDIGEENAAAD"
     misc_feature    501..704
                     /gene="LOC139839781"
                     /note="FYVE domain like superfamily; Region: FYVE_like_SF;
                     cl28890"
                     /db_xref="CDD:333710"
     misc_feature    order(567..584,597..599,681..683)
                     /gene="LOC139839781"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]; other site"
                     /db_xref="CDD:277264"
     misc_feature    1506..2324
                     /gene="LOC139839781"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; Region:
                     Fab1_TCP; cd03334"
                     /db_xref="CDD:239450"
     misc_feature    3699..5390
                     /gene="LOC139839781"
                     /note="Phosphatidylinositol-4-phosphate 5-kinase [Signal
                     transduction mechanisms]; Region: MSS4; COG5253"
                     /db_xref="CDD:227578"
     misc_feature    4581..5369
                     /gene="LOC139839781"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; Region: PIPKc_PIKfyve; cd17300"
                     /db_xref="CDD:340437"
     misc_feature    order(4722..4724,4749..4751,4755..4757,4932..4943,
                     4974..4976,5031..5033,5172..5174,5217..5222)
                     /gene="LOC139839781"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340437"
ORIGIN      
        1 gcaggactct gattgaacgg agggtgcgtg gattggactc gatcaattcg acgttcaagg
       61 tgtacgacag acgtattctg gttggcgatt tcgagtaata ttttcgtctc atcctaggtt
      121 atgtttgttt tagggttcat tatgaatagg tgctagggct ttgtattaca caagttgaat
      181 taataagtac ttgcctgcta gagattacga tttgatcgaa tttggtacag tatagattga
      241 gatagttgaa ttcagttttt aaattgatga acacaagcag tggtttggta tattgatatc
      301 gaagtattcg attgtgaggt gtaccgattg ttgttgtatt ctgagttgga tgtggctgtg
      361 aacaaatgag aattacataa tgagtgggat aagaaaattg ttagctcatg gatgcaccgg
      421 agaaaccgtt aagtaatctg ataggtaatc taagatcatg gatccctcga cgttcagagc
      481 cagagaatgt gtcgagggac ttttggatgc ccgatcaaag ttgtagggta tgttacgagt
      541 gtgattctca gtttactttg tttaatagaa gacatcattg tcggctttgt gggcgggttt
      601 tttgtgccaa gtgtactcag aattggattc ccacgagatc tagtaataag aatatattta
      661 gggaagattc agagaagatc agagcttgta attactgttt taagcaatgg caacaaggtg
      721 ggctagctac ctctgttgat catggggtcc aggattcaag cttggatctt agtacgtcac
      781 catcagctgc cagtcttatt agcacaaaat ctagctgtac tggtgacagt agcagcatta
      841 cgtttacttc tgtgccacac tcaggctgct cttatcatca gtctgtggta atggaaacaa
      901 atatagatga gcaaaatgaa ctagctgcaa ggagtaatga tctactactt gatgtggctg
      961 ctcagtctcc tagccattat ggatgtctta taaacagggg tgatgatttt gatgaagagt
     1021 atgcttatca gctagctgct gctggcggaa ggcatctctt acaggttgaa aatggctatt
     1081 atgatgaatt acaaatggat gatattgata atgactatga atctcataaa gtgtactcgg
     1141 atgaacaacc tgctgatgca aaaagtgcta gcagctgttc cttgcaagat gttcaacaac
     1201 ttgagaaaaa aggggataca caagattcta gggatgaggg tgaagcctca tcttctttat
     1261 atgctgcaca aagtgttcaa gaacctgtgg attttgagaa caacggggtc ttatggttgc
     1321 ctcctgaacc agaagatgag gaagatgaga gggaagctct tatttttgac gatgatgatt
     1381 atgaagggga tgctgctgga gaatggggtt cttcaagcaa ccttggaagt ggggaatgtc
     1441 gcaataggga gaagtcaaat gaagagcaca agagagcaat gaacactgta gttgatggac
     1501 attttagggc tttaatatct cagttacttc aggttgataa ccttcttgat aatgatgaag
     1561 atgataaaga tagttggtta gaaataatta catccctgtc atgggaagct gcatctttgt
     1621 taaaaccaga cactagcaaa ggtggtggga tggacccagg aggatatgtt aagataaaat
     1681 gtttagcttc cgggcttcgc tctgacagta tggtggtgaa aggagttgtt tgtaagaaaa
     1741 atgtggctca tagacggatg acgtcaagaa tagagaagcc tcgtttctta attctcggag
     1801 gggctctcga gtatcaacgt gtttcaaatc atttgtcaag ttttgatact cttttgcagc
     1861 aggaaatgga tcatttaaag atggcagtgg caaagataga tgcacaccag cctgatgttc
     1921 ttttggttga gaagtcggtt tcacgatatg cacaagagta tcttcttgca aaggacatat
     1981 ctcttgtttt gaatatcaaa agaccgctac tggaacgaat agcgcgttgc actggtgctc
     2041 aaatagttcc ttcaattgat cgtctttcat ctcaaaagtt gggatattcg gatttgtttc
     2101 atgttgaaag gttccaagaa gaacatggaa gtgctggaca gggtggcaag aaacttgtta
     2161 aaacactcat gtactttgaa gggtgtccaa agccatttgg ttgcactgta ttacttagag
     2221 gtgcgagtgg tgatgaactg aagaaagtaa aacatgttgt tcagtatggt gtttttgctg
     2281 cttatcattt agctttggaa acttcttttc ttgctgatga aggagcctca ctgcctgaac
     2341 ttcccttgaa tgctacgcta actgtcgcac ttcctgataa agtatcaaat attgaccggt
     2401 caatctccac aattcctggt tttactactc ccacgaatga caaacctcag gttcatcaac
     2461 cctgtattga taggaccgag acacacagtg tctccatgtc agaaatgttc tcttctatca
     2521 tggaacaaaa gcccgaagtc ggcccaaata cttcaaagcc caattcactt ttgctctctt
     2581 caaagctaaa agttccacaa ggtactgttg gtacttctgc acctaatggt tttgagcctc
     2641 cattggcaca agttgataaa ggtaagtgca tgaatggtgt ggaccctgct gtttcagacg
     2701 gatcgtctct gttgttggtt gggaaaaatg ggaaagaaga tgattctact tcaaaagaag
     2761 agtttccccc atcaccttca gaccatcaaa gcattttggt ttccttgtca tctcggtgtg
     2821 tgtggaaggg aactgtttgt gagcggtccc acctgttccg cataaagtat tatggaaatt
     2881 tcgataaacc acttggccgc tttctacgtg atgatttgtt tgatcaaggt tatagatgcc
     2941 gatcatgtga gatgccatct gaagcacatg tacagtgtta cactcataga caaggaactt
     3001 taaccatttc tgtgaagaag ttgcctgaat ttctgttacc aggagaaaaa gagggtaaga
     3061 tttggatgtg gcacaggtgt ttgagatgtc ctcgtacatg cggtttccct cccgcaactc
     3121 gaagaatagt gatgtcagat gcagcatggg gtttgtcctt tgggaagttt ctagaactta
     3181 gtttctcaaa ccatgctgct gccaacaggg ttgccagctg tggtcattct ctccatcggg
     3241 actgtcttcg cttttacggt ttcggaaaaa tggttgcttg ctttcggtat gcatctattg
     3301 atgtccattc tgtctacctc cctcctcata aactagaatt taaatatgag aattgggaat
     3361 ggattcaaca tgaagtaaat gaggttattc gccgttcgga gtcattattt gcagaaattc
     3421 ttaacgttct gagccagatg gcagacaaga gacgtcaagt tacagatttg aaagtaatgt
     3481 tacgaaagga aaaagcagag tttgaggact ctttgcaaaa gattctaaat cacgaggtga
     3541 aaaatgggca acctatcatt gatattcttg agatcaatcg tttgcggagg cagctcctct
     3601 ttcaatctta tgtgtgggat catcgactgg tgtatgcgtc taatgtcgat agcaatagcc
     3661 cgaagcccaa cgtaaatgat ttggaaccag aactcgagga taaaaacgat gaaacatttg
     3721 tcgactcaaa gtcagttatc gattcatgta atatttcgga tgttggtgaa gtcgataaca
     3781 ttggtaaaga aagcgaagtg gatgcatatt ctagcccaat agaagaaaac tacccgcctg
     3841 attcactact accaaattta agtgtgcgta gagccgtgtc tgaagggcag tttcctgtta
     3901 tggcaagttt atcagacact cttgatgctg catggactgg taaccatccg gaatgttcta
     3961 tattatctga tttagatttg aatgattgta ataaactgga aaagggagat cgtatggacg
     4021 aatctaagac gtcgtcactc ttatctcctg tattatctac taaaggttcc gaaactatag
     4081 aagattcaag tagctggtta ggtatgccgt ttctcaactt ttaccgctcg ttaaacaaaa
     4141 atttctcagc aacttctcag aaactcgaca cactcaacgg ctataaacct gtgtacatct
     4201 catcctttcg agaatcagaa ctccaaggtg gggcccgaat gcttctagct gtgggattta
     4261 atgataccgt tatacccgtg tatgatgatg agcccacaag tatcatatcc tacgccttgc
     4321 tctcacctga ttacatctcc caggtgtctg acgagtttga tagaataaaa gacagtgggg
     4381 aatctcaatc tatgtttttt tcacagtctg ctgatacgtc aagttttcag tcatctagta
     4441 actttgatgg aatgtcggtt ggggacgata gtattttatc catgtcggga tctcgtagtt
     4501 cgctaatgcc agatccttta tcgcagacaa aatctttgca ttctagagtc gaatttacag
     4561 acgatagtct tctcggtaaa gtaaaatatg ctgtgactac ttactatgcg aaacaatttg
     4621 aagcattacg gaggatatgt tgcccttctg agatggacta cataaggtct cttagccgtt
     4681 gcaagaagtg gggggcccag ggtggtaaaa gcaatgtctt ttttgcaaaa acgttggatg
     4741 atcgtttcat tatcaaacag gtaacaaaga cggagctgga atcattcata aaatttgctc
     4801 ctgcttactt caagtattta tctgaatcga ttggcactgg aagtccaaca tgcctggcga
     4861 agattttggg catttatcag gtcactaagc aaatgaaagg tgggaaggaa acgaaaatgg
     4921 atgtgctgat tatggagaat cttctgtttg gaaggaattt atcacggctt tatgatctaa
     4981 aagggtcgtc aagatcacga tataacgctg atagtagtgg tagtaacaag gttttgcttg
     5041 atcagaattt gattgaagct atgccaactt ctcctatatt tgttggcaat aaggccaaac
     5101 gattgttgga aagagctgtt tggaacgata ctgcttttct cgcttcggtt gatgtaatgg
     5161 actattcttt gctggttggg gtagatgaag aaaaacacga acttgttctc gggattattg
     5221 acttcatgag acagtataca tgggacaaac acctagaaac atgggttaag gcatcgggta
     5281 ttttgggtgg tcccaagaac gcgtctccaa cagtaatttc accaaagcag tacaagaaac
     5341 gattcaggaa agccatgaca acctattttt taatggtccc tgatcaatgg tctcctccta
     5401 ctattatacg tagcctgtcc caaacggata ttggtgaaga aaacgcagct gctgattgat
     5461 gcactttaac gttgtacatt tcaaatttat atatgtccac ggcatcaccc cctttaaagt
     5521 tacagttttt aaaatctagt attcttttct tagcagtgga atttgattgc taagtgtggc
     5581 aaaatggtgg tgaaaaaact gctacaaagc tttgttttag gtgcttcgcg gggtgtttaa
     5641 ttgttttatt ttttatcatc tttgcagata ttgttttgta tattaccacg tccatgtata
     5701 tttgcaaact tgtcatcttt tgtagtttta gtgtcttcat tgattttttc atgatttatt
     5761 gcatattcat aaatatcttt atttatttta tccgtttttg gtgtcattga atc
//
LOCUS       XM_071829937            3166 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate receptor 2.8-like
            (LOC139839782), mRNA.
ACCESSION   XM_071829937
VERSION     XM_071829937.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3166
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3166
                     /gene="LOC139839782"
                     /note="glutamate receptor 2.8-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839782"
     CDS             135..2930
                     /gene="LOC139839782"
                     /codon_start=1
                     /product="glutamate receptor 2.8-like"
                     /protein_id="XP_071686038.1"
                     /db_xref="GeneID:139839782"
                     /translation="MKNIICHHIVLLAYVMFTTSFIFATTAKTTINVGVILDKETSIG
                     KMSSICISMALNDFYQQHENYTTEIQLRFRDSKQDNVQAASAAIDLLKNDQVMAILGP
                     MTSSQADFVINIGNKSNVPIISPATSPYLSTNDNVYFIRTAPDSSLQLEPIAELIKHF
                     NWREIVFVYEDGEYGRGLVPYLSEAMMNIGTKVMSRNAISTSASDDSILKELYKLKTM
                     QTRVFVVHVLPDLARRFFKNVNEAGMMEEGYVWIITDVLTSRLHSLHQTDIDLMQGVL
                     GVKSYIPRSNELINFEKRWKRQFIKQYPEDDVTELDMFGVWSYDSVFALAMAVERIGI
                     SETNTSFKRRTNSTTDLGAIGTSEMGSSLVPWIRNSSFKGLSGEFHIVDGQLQWSVHQ
                     IVNVIGAKENVIGFWTSEYGISKSLKNRTNNNLRAITWPGDSHVIPKGWEIPTSDVNM
                     LRVGVPAQRGFGLFIKTNTDPQTKQETVTGFSVDVFKAVINELPYAVTHEYVPFVTSD
                     GKKPAGTYTDLIYSVSNGTYDAAVGDITILSKRADFVEFTLPYTEAGVSMIVAIKDER
                     KSAWIFMKPLEKKLWITIGASFIYTGLVVWILEHQVNKEFRGKPYKQLGMIFWFSFST
                     LVFAHREKVMSNLSRFVVIVWVFVVLVLNSSYTASLTSMLTVQQLRPTYADINEIMRN
                     GESVGYQDGSFVKDMLKNLGFDDSKVKNYSTFEQYDEALKKGSKFGGVSAIMDELPYN
                     RVFLAKFCTKYTMTGPIYKSAGFGFAFPRGSPLVHDVSRAVLQVTEDQMTNLSRKWFG
                     DSAGCDQQNEAAVTSDKLTLDSFKGLFLIAGLSSTSALMLFFLRFVYQNRLMLSSEDT
                     VTQKLVAIAKTFDGYKDDESKRVTTEAEAAADDEFVPAISVFHQEAGDLSHDEGFSTT
                     EPGSPVRDNIQVVETTV"
     misc_feature    228..1385
                     /gene="LOC139839782"
                     /note="periplasmic ligand-binding domain of Arabidopsis
                     thaliana glutamate receptors and its close homologs in
                     other plants; Region: PBP1_GABAb_receptor_plant; cd19990"
                     /db_xref="CDD:380645"
     misc_feature    order(270..272,507..512,1074..1076)
                     /gene="LOC139839782"
                     /note="putative ligand binding site [chemical binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    order(375..377,384..386,471..473,726..728)
                     /gene="LOC139839782"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    1479..2525
                     /gene="LOC139839782"
                     /note="Plant glutamate receptor domain; the type 2
                     periplasmic binding protein fold; Region: GluR_Plant;
                     cd13686"
                     /db_xref="CDD:270404"
ORIGIN      
        1 ttatacttag gtagttgtac atatccagtg atgtctccct tcattctatc aatctaacat
       61 gcttaaaaac accccattat tataaggaaa aagcaagcaa gaaattaaaa aaaaaaacac
      121 ccatttattt aggcatgaag aatataatat gtcaccatat agtactacta gcctatgtta
      181 tgtttactac gagcttcata tttgctacaa cagcaaaaac aaccataaac gtaggtgtga
      241 ttcttgataa ggaaacaagc attggtaaga tgagcagtat ttgcatttca atggcgttaa
      301 acgatttcta tcagcaacac gaaaactata ccaccgaaat tcaacttcgt tttcgtgatt
      361 ctaaacaaga caacgttcaa gccgcttctg cagccatcga cctgttgaaa aacgatcaag
      421 tcatggcgat tttaggaccc atgacatctt cacaagcaga ttttgtgata aacattggta
      481 acaaatcaaa cgttcctatt atatcgcctg caactagccc ttatctttcc acaaacgaca
      541 acgtttactt cattcgtacc gcacctgatt cgtccttgca actcgaaccc atagcagaat
      601 tgatcaaaca ctttaactgg agagaaatag tgtttgttta tgaagatggt gaatatggga
      661 gaggacttgt tccttattta tcggaagcca tgatgaatat tggtaccaaa gttatgtctc
      721 gtaacgctat atctacttct gcatcggatg attcgatcct taaagagctt tacaagttaa
      781 aaacaatgca gactcgggtt tttgtggtac acgtgttgcc agatttggcg aggcggtttt
      841 tcaagaatgt aaatgaagca ggaatgatgg aagaaggtta tgtttggatc ataactgatg
      901 tgcttacgag tcgtttacat tctttgcatc aaacggatat tgatttgatg caaggagtac
      961 tcggtgtgaa gtcttatatc ccgaggtcta acgagctaat aaactttgag aaaagatgga
     1021 aacgacaatt tataaaacaa tatcccgaag acgatgttac agaactagac atgtttgggg
     1081 tatggtctta tgatagtgtt tttgcactgg ctatggcggt ggagagaatc ggaataagtg
     1141 aaacaaatac tagtttcaaa cgacgtacga actcaaccac tgatttgggt gctattggaa
     1201 catctgaaat ggggtcaagt cttgttccat ggatccgaaa ttcaagtttt aaagggctaa
     1261 gtggggaatt ccatatagtt gatggacagt tacaatggtc ggtacaccaa attgtgaacg
     1321 taataggagc gaaggagaat gttatcgggt tttggacttc ggaatatggc atctcaaaga
     1381 gcttgaagaa tcgaacgaat aataatctga gggccattac atggcccggt gacagtcatg
     1441 tcatccctaa agggtgggag attccaacaa gtgatgtaaa catgttaaga gtaggtgttc
     1501 ctgcacaaag ggggttcggt ctgtttatta aaaccaatac cgaccctcaa acaaagcaag
     1561 aaaccgttac tgggttttct gtggacgttt tcaaagccgt tattaatgag ttgccttatg
     1621 ctgtcacaca tgaatatgta ccttttgtta cttcagatgg caagaaacct gccggaacct
     1681 ataccgatct tatttacagt gtctccaatg ggacatatga tgcggcggtt ggagatatta
     1741 caatcctttc aaagcgtgcg gattttgttg aattcacatt accatataca gaagcaggtg
     1801 tgtcaatgat tgttgcgatc aaggatgaga ggaagagtgc atggatcttc atgaaaccgc
     1861 tagagaaaaa gctttggata acaattggag cgtctttcat ctacacagga ctcgtggtat
     1921 ggattctaga acatcaagta aacaaagaat ttcgtgggaa accttataaa cagcttggaa
     1981 tgatcttctg gttttctttc tcaacgctcg tttttgctca tcgagagaag gtcatgagta
     2041 acttatcaag atttgtggta attgtgtggg tgtttgtggt gcttgtgctc aactcgagct
     2101 acactgcgag cttgacatct atgttaacag tacaacaact taggcccacg tacgctgata
     2161 ttaatgagat catgagaaac ggtgaatcgg taggatacca agatggttct ttcgttaagg
     2221 atatgttgaa aaatttgggt tttgatgata gcaaggtaaa aaactacagc acgtttgagc
     2281 agtacgacga agccctaaaa aaaggaagta aatttggtgg tgtttcggca attatggatg
     2341 aacttccgta taatagagtt ttcttggcta aattctgtac caagtatacc atgactggtc
     2401 ccatttacaa atccgcaggc tttggttttg catttccaag agggtctcct ttagtccatg
     2461 atgtttcgag agcagtccta caagtaacag aagatcaaat gacgaatctt tcaagaaagt
     2521 ggtttggaga ttcagccggt tgtgatcagc agaacgaagc agctgtcacc tcggacaagc
     2581 tcacactcga tagcttcaag ggactttttc tcattgctgg attatcatca acttctgcac
     2641 tcatgctttt cttcctgaga ttcgtgtatc aaaatagact aatgttgtct tctgaagata
     2701 cagttactca gaaactagtt gcaattgcaa aaacgtttga cgggtataaa gacgatgaat
     2761 ccaaaagggt caccacagag gcagaagcag cagcagatga tgaatttgtt cccgctatca
     2821 gcgtatttca tcaagaagcg ggcgatttat ctcatgatga agggttttcg accactgaac
     2881 cggggtcacc agttcgtgac aatattcagg tcgtagaaac tactgtctga gactatgcta
     2941 atatcctctg tagttaacta gctttataga ataaggtacg tatagtgttc agttattcac
     3001 attctagttc tgtcaatatc attgtaacct agtatccatt tttctcacat tactagtata
     3061 tgtatatgta tcttagtcag atttgtgaca catgaattaa tgtatgtaac tgttatattc
     3121 tggtaatgtg tatatatcat ttatccaata ttctagtctg caaaaa
//
LOCUS       XM_071829938            2305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839784), transcript variant X1, mRNA.
ACCESSION   XM_071829938
VERSION     XM_071829938.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2305
                     /gene="LOC139839784"
                     /note="uncharacterized LOC139839784; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 48
                     Proteins"
                     /db_xref="GeneID:139839784"
     CDS             293..1930
                     /gene="LOC139839784"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686039.1"
                     /db_xref="GeneID:139839784"
                     /translation="MDFAKRWCKKLRPKEKPKSSPRKDVRSNGKDGLRVTSDEAPSNA
                     TKQKVEAAKQYIEKHYKEQMKNLNERKERRHVLEKKLADSEVTEEEQNNLLKHLEKKE
                     TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKTTGNVYAMKKLKKSEMLRRGQV
                     EHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEA
                     RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKFGHMKLSDFGLCKPLDCTNLQEKDF
                     SGANNLSGTLQNDGRPVVPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY
                     GMECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKIVNWRTHLKFPEEAKLSPEAKDLI
                     CKLLCNVEKRLGTKGAYEIKAHPWFKGIEWEKLYQIEAAFIPEVNGELDTQNFEKFEE
                     GDNQISSSTKSGPWRKMLSSKDVNFMGYTYKNFEIVNEHEVPGIAELKKKSSKPKRPT
                     VKSLFKEETDSTSSQNQGSFLNLLPRQFEVSKQKEST"
     misc_feature    446..631
                     /gene="LOC139839784"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; Region:
                     MobB_NDR_LATS-like; cd21742"
                     /db_xref="CDD:439267"
     misc_feature    order(446..451,455..463,467..472,479..484,491..493,
                     500..502,512..514,587..589,596..604,608..613,620..625)
                     /gene="LOC139839784"
                     /note="Mob binding site [polypeptide binding]; other site"
                     /db_xref="CDD:439267"
     misc_feature    638..1735
                     /gene="LOC139839784"
                     /note="Catalytic domain of Nuclear Dbf2-Related
                     kinase-like Protein Serine/Threonine Kinases; Region:
                     STKc_NDR_like; cd05599"
                     /db_xref="CDD:270750"
     misc_feature    order(662..676,686..688,725..727,731..733,827..829,
                     875..880,884..886,896..898,902..904,1013..1015,1019..1021,
                     1025..1030,1034..1036,1064..1069,1076..1078,1241..1258,
                     1337..1339,1355..1357,1364..1366)
                     /gene="LOC139839784"
                     /note="active site"
                     /db_xref="CDD:270750"
     misc_feature    order(662..676,686..688,725..727,731..733,827..829,
                     878..886,896..898,1013..1015,1019..1021,1025..1030,
                     1034..1036,1064..1069)
                     /gene="LOC139839784"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(674..676,896..898,902..904,1013..1015,1019..1021,
                     1025..1027,1076..1078,1241..1258,1337..1339,1355..1357,
                     1364..1366)
                     /gene="LOC139839784"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(1064..1102,1229..1258)
                     /gene="LOC139839784"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270750"
     misc_feature    1715..1732
                     /gene="LOC139839784"
                     /note="hydrophobic motif (HM); other site"
                     /db_xref="CDD:270750"
ORIGIN      
        1 gcttttctct ttctctctct aaaaactgtg tgttcattgg tgatactgca atttagccgt
       61 atctgcgctc acttcatcac tccacaattc tcattctagg gttttcaatt tcatccaatt
      121 caaccatcga tcattactct agagtactta ggatcgtctg cttcgaaggc ggtaacgtgt
      181 ctatagattt tgttgatcga aaatttgagc aaggtggaaa gattagaact ttgctggatt
      241 ggttttcatt gtagtgaaat tgattagaag aaagtgttgg ttgacttaac atatggattt
      301 tgcaaagcgt tggtgtaaaa agttacgacc gaaagagaag cctaaatctt caccgagaaa
      361 ggatgttaga agtaatggaa aagatggtct aagagtaaca agtgatgaag caccctcaaa
      421 tgccactaaa cagaaggttg aggctgctaa acagtatatt gaaaaacact acaaggagca
      481 aatgaagaat ctgaatgagc gaaaggaacg gcgtcatgta cttgagaaga agttggctga
      541 ttcagaggta accgaagaag aacaaaacaa tctacttaaa catttggaga agaaagaaac
      601 tgaatatatg cgacttcaga ggcataaaat gggcgctgat gattttgagc cattgacaat
      661 gataggaaag ggtgcattcg gggaggttag aatatgcagg gagaagacaa ctggcaatgt
      721 ctatgcaatg aaaaaattaa aaaaatccga aatgctccgt agaggccagg ttgagcatgt
      781 gaaagcagaa aggaacctac ttgcagaggt tgatagcaat tgcattgtta aactttattg
      841 ttcatttcaa gatgaagaat atttatacct cataatggaa tatctacccg ggggagatat
      901 gatgacttta ctgatgcgaa aggatacgtt gactgaagat gaagctaggt tttatgttgg
      961 ggaaactgtt ttggcaatcg agtctattca caaacataat tatattcata gggatattaa
     1021 accggacaac ttgctgcttg ataaatttgg gcacatgaaa ttgtcagatt ttggattgtg
     1081 taagccatta gactgtacca atcttcaaga aaaggatttt tctggggcga ataatttaag
     1141 tgggaccctt caaaatgatg ggcgccctgt tgtgccaaaa cgtactcaac aggagcaact
     1201 tcagcattgg cagaggaata ggaggatgct tgcatattcc actgtcggaa cacctgatta
     1261 tattgctcca gaagttttgc tgaagaaagg atatggaatg gaatgtgatt ggtggtctct
     1321 tggggcaatt atgtatgaaa tgcttgttgg atacccaccc ttctattcag atgagccaat
     1381 ggctacttgt agaaagattg ttaattggag aactcattta aaatttcccg aagaggctaa
     1441 actgtctccc gaggcaaaag atcttatctg taaacttctt tgcaacgttg aaaagaggct
     1501 tggaaccaaa ggcgcatatg aaataaaggc acacccttgg tttaaaggaa tagaatggga
     1561 aaaattgtat caaattgaag ctgcatttat tcctgaagta aatggcgagc ttgataccca
     1621 aaattttgag aaatttgaag agggggacaa ccaaatttcg tcgtcaacaa agtcaggccc
     1681 ttggagaaag atgctatctt ctaaagatgt caacttcatg gggtacacat ataagaactt
     1741 cgaaatcgta aatgaacatg aggttccagg aattgctgag ttgaagaaaa agagttcaaa
     1801 gcctaagaga cctacagtga agtccctttt taaagaagaa acggactcaa catcctctca
     1861 aaatcaagga agttttctca acctcctacc tcgacagttt gaagtctcga aacaaaagga
     1921 gtctacgtga accagtattg ttctgttcat aacggtcata tattcatagt taaaaatcaa
     1981 ttaaaagcaa tgcaatgttc ttaattgctg atcgacagct tccggttaca cgggggtggg
     2041 taaatacaga atgaaagagg gattttcagt ttgttcaatt tgcagacgaa aaatgatttg
     2101 tttgatgata ttgtggatga tagaccattt tgtggctttc attttttctg ggtttccaag
     2161 tctcttgtaa atttgtttat tatcattatt ggactgtgta tatttgttct tgcattactt
     2221 gtagttggtg tgtaacatat ccagttgtca aggtaacgtt tatgggactt gtaacttgca
     2281 agtactttga tagttacagt tttat
//
LOCUS       XM_071829939            2308 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839784), transcript variant X2, mRNA.
ACCESSION   XM_071829939
VERSION     XM_071829939.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2308
                     /gene="LOC139839784"
                     /note="uncharacterized LOC139839784; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 48
                     Proteins"
                     /db_xref="GeneID:139839784"
     CDS             296..1933
                     /gene="LOC139839784"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686040.1"
                     /db_xref="GeneID:139839784"
                     /translation="MDFAKRWCKKLRPKEKPKSSPRKDVRSNGKDGLRVTSDEAPSNA
                     TKQKVEAAKQYIEKHYKEQMKNLNERKERRHVLEKKLADSEVTEEEQNNLLKHLEKKE
                     TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKTTGNVYAMKKLKKSEMLRRGQV
                     EHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEA
                     RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKFGHMKLSDFGLCKPLDCTNLQEKDF
                     SGANNLSGTLQNDGRPVVPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY
                     GMECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKIVNWRTHLKFPEEAKLSPEAKDLI
                     CKLLCNVEKRLGTKGAYEIKAHPWFKGIEWEKLYQIEAAFIPEVNGELDTQNFEKFEE
                     GDNQISSSTKSGPWRKMLSSKDVNFMGYTYKNFEIVNEHEVPGIAELKKKSSKPKRPT
                     VKSLFKEETDSTSSQNQGSFLNLLPRQFEVSKQKEST"
     misc_feature    449..634
                     /gene="LOC139839784"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; Region:
                     MobB_NDR_LATS-like; cd21742"
                     /db_xref="CDD:439267"
     misc_feature    order(449..454,458..466,470..475,482..487,494..496,
                     503..505,515..517,590..592,599..607,611..616,623..628)
                     /gene="LOC139839784"
                     /note="Mob binding site [polypeptide binding]; other site"
                     /db_xref="CDD:439267"
     misc_feature    641..1738
                     /gene="LOC139839784"
                     /note="Catalytic domain of Nuclear Dbf2-Related
                     kinase-like Protein Serine/Threonine Kinases; Region:
                     STKc_NDR_like; cd05599"
                     /db_xref="CDD:270750"
     misc_feature    order(665..679,689..691,728..730,734..736,830..832,
                     878..883,887..889,899..901,905..907,1016..1018,1022..1024,
                     1028..1033,1037..1039,1067..1072,1079..1081,1244..1261,
                     1340..1342,1358..1360,1367..1369)
                     /gene="LOC139839784"
                     /note="active site"
                     /db_xref="CDD:270750"
     misc_feature    order(665..679,689..691,728..730,734..736,830..832,
                     881..889,899..901,1016..1018,1022..1024,1028..1033,
                     1037..1039,1067..1072)
                     /gene="LOC139839784"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(677..679,899..901,905..907,1016..1018,1022..1024,
                     1028..1030,1079..1081,1244..1261,1340..1342,1358..1360,
                     1367..1369)
                     /gene="LOC139839784"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(1067..1105,1232..1261)
                     /gene="LOC139839784"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270750"
     misc_feature    1718..1735
                     /gene="LOC139839784"
                     /note="hydrophobic motif (HM); other site"
                     /db_xref="CDD:270750"
ORIGIN      
        1 gcttttctct ttctctctct aaaaactgtg tgttcattgg tgatactgca atttagccgt
       61 atctgcgctc acttcatcac tccacaattc tcattctagg gttttcaatt tcatccaatt
      121 caaccatcga tcattactct agcagagtac ttaggatcgt ctgcttcgaa ggcggtaacg
      181 tgtctataga ttttgttgat cgaaaatttg agcaaggtgg aaagattaga actttgctgg
      241 attggttttc attgtagtga aattgattag aagaaagtgt tggttgactt aacatatgga
      301 ttttgcaaag cgttggtgta aaaagttacg accgaaagag aagcctaaat cttcaccgag
      361 aaaggatgtt agaagtaatg gaaaagatgg tctaagagta acaagtgatg aagcaccctc
      421 aaatgccact aaacagaagg ttgaggctgc taaacagtat attgaaaaac actacaagga
      481 gcaaatgaag aatctgaatg agcgaaagga acggcgtcat gtacttgaga agaagttggc
      541 tgattcagag gtaaccgaag aagaacaaaa caatctactt aaacatttgg agaagaaaga
      601 aactgaatat atgcgacttc agaggcataa aatgggcgct gatgattttg agccattgac
      661 aatgatagga aagggtgcat tcggggaggt tagaatatgc agggagaaga caactggcaa
      721 tgtctatgca atgaaaaaat taaaaaaatc cgaaatgctc cgtagaggcc aggttgagca
      781 tgtgaaagca gaaaggaacc tacttgcaga ggttgatagc aattgcattg ttaaacttta
      841 ttgttcattt caagatgaag aatatttata cctcataatg gaatatctac ccgggggaga
      901 tatgatgact ttactgatgc gaaaggatac gttgactgaa gatgaagcta ggttttatgt
      961 tggggaaact gttttggcaa tcgagtctat tcacaaacat aattatattc atagggatat
     1021 taaaccggac aacttgctgc ttgataaatt tgggcacatg aaattgtcag attttggatt
     1081 gtgtaagcca ttagactgta ccaatcttca agaaaaggat ttttctgggg cgaataattt
     1141 aagtgggacc cttcaaaatg atgggcgccc tgttgtgcca aaacgtactc aacaggagca
     1201 acttcagcat tggcagagga ataggaggat gcttgcatat tccactgtcg gaacacctga
     1261 ttatattgct ccagaagttt tgctgaagaa aggatatgga atggaatgtg attggtggtc
     1321 tcttggggca attatgtatg aaatgcttgt tggataccca cccttctatt cagatgagcc
     1381 aatggctact tgtagaaaga ttgttaattg gagaactcat ttaaaatttc ccgaagaggc
     1441 taaactgtct cccgaggcaa aagatcttat ctgtaaactt ctttgcaacg ttgaaaagag
     1501 gcttggaacc aaaggcgcat atgaaataaa ggcacaccct tggtttaaag gaatagaatg
     1561 ggaaaaattg tatcaaattg aagctgcatt tattcctgaa gtaaatggcg agcttgatac
     1621 ccaaaatttt gagaaatttg aagaggggga caaccaaatt tcgtcgtcaa caaagtcagg
     1681 cccttggaga aagatgctat cttctaaaga tgtcaacttc atggggtaca catataagaa
     1741 cttcgaaatc gtaaatgaac atgaggttcc aggaattgct gagttgaaga aaaagagttc
     1801 aaagcctaag agacctacag tgaagtccct ttttaaagaa gaaacggact caacatcctc
     1861 tcaaaatcaa ggaagttttc tcaacctcct acctcgacag tttgaagtct cgaaacaaaa
     1921 ggagtctacg tgaaccagta ttgttctgtt cataacggtc atatattcat agttaaaaat
     1981 caattaaaag caatgcaatg ttcttaattg ctgatcgaca gcttccggtt acacgggggt
     2041 gggtaaatac agaatgaaag agggattttc agtttgttca atttgcagac gaaaaatgat
     2101 ttgtttgatg atattgtgga tgatagacca ttttgtggct ttcatttttt ctgggtttcc
     2161 aagtctcttg taaatttgtt tattatcatt attggactgt gtatatttgt tcttgcatta
     2221 cttgtagttg gtgtgtaaca tatccagttg tcaaggtaac gtttatggga cttgtaactt
     2281 gcaagtactt tgatagttac agttttat
//
LOCUS       XM_071829940            2327 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839784), transcript variant X3, mRNA.
ACCESSION   XM_071829940
VERSION     XM_071829940.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2327
                     /gene="LOC139839784"
                     /note="uncharacterized LOC139839784; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 48
                     Proteins"
                     /db_xref="GeneID:139839784"
     CDS             315..1952
                     /gene="LOC139839784"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686041.1"
                     /db_xref="GeneID:139839784"
                     /translation="MDFAKRWCKKLRPKEKPKSSPRKDVRSNGKDGLRVTSDEAPSNA
                     TKQKVEAAKQYIEKHYKEQMKNLNERKERRHVLEKKLADSEVTEEEQNNLLKHLEKKE
                     TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKTTGNVYAMKKLKKSEMLRRGQV
                     EHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEA
                     RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKFGHMKLSDFGLCKPLDCTNLQEKDF
                     SGANNLSGTLQNDGRPVVPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY
                     GMECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKIVNWRTHLKFPEEAKLSPEAKDLI
                     CKLLCNVEKRLGTKGAYEIKAHPWFKGIEWEKLYQIEAAFIPEVNGELDTQNFEKFEE
                     GDNQISSSTKSGPWRKMLSSKDVNFMGYTYKNFEIVNEHEVPGIAELKKKSSKPKRPT
                     VKSLFKEETDSTSSQNQGSFLNLLPRQFEVSKQKEST"
     misc_feature    468..653
                     /gene="LOC139839784"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; Region:
                     MobB_NDR_LATS-like; cd21742"
                     /db_xref="CDD:439267"
     misc_feature    order(468..473,477..485,489..494,501..506,513..515,
                     522..524,534..536,609..611,618..626,630..635,642..647)
                     /gene="LOC139839784"
                     /note="Mob binding site [polypeptide binding]; other site"
                     /db_xref="CDD:439267"
     misc_feature    660..1757
                     /gene="LOC139839784"
                     /note="Catalytic domain of Nuclear Dbf2-Related
                     kinase-like Protein Serine/Threonine Kinases; Region:
                     STKc_NDR_like; cd05599"
                     /db_xref="CDD:270750"
     misc_feature    order(684..698,708..710,747..749,753..755,849..851,
                     897..902,906..908,918..920,924..926,1035..1037,1041..1043,
                     1047..1052,1056..1058,1086..1091,1098..1100,1263..1280,
                     1359..1361,1377..1379,1386..1388)
                     /gene="LOC139839784"
                     /note="active site"
                     /db_xref="CDD:270750"
     misc_feature    order(684..698,708..710,747..749,753..755,849..851,
                     900..908,918..920,1035..1037,1041..1043,1047..1052,
                     1056..1058,1086..1091)
                     /gene="LOC139839784"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(696..698,918..920,924..926,1035..1037,1041..1043,
                     1047..1049,1098..1100,1263..1280,1359..1361,1377..1379,
                     1386..1388)
                     /gene="LOC139839784"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(1086..1124,1251..1280)
                     /gene="LOC139839784"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270750"
     misc_feature    1737..1754
                     /gene="LOC139839784"
                     /note="hydrophobic motif (HM); other site"
                     /db_xref="CDD:270750"
ORIGIN      
        1 gcttttctct ttctctctct aaaaactgtg tgttcattgg tgatactgca atttagccgt
       61 atctgcgctc acttcatcac tccacaattc tcattctagg gttttcaatt tcatccaatt
      121 caaccatcga tcattactct agtaggttat attgattgta gcagagtact taggatcgtc
      181 tgcttcgaag gcggtaacgt gtctatagat tttgttgatc gaaaatttga gcaaggtgga
      241 aagattagaa ctttgctgga ttggttttca ttgtagtgaa attgattaga agaaagtgtt
      301 ggttgactta acatatggat tttgcaaagc gttggtgtaa aaagttacga ccgaaagaga
      361 agcctaaatc ttcaccgaga aaggatgtta gaagtaatgg aaaagatggt ctaagagtaa
      421 caagtgatga agcaccctca aatgccacta aacagaaggt tgaggctgct aaacagtata
      481 ttgaaaaaca ctacaaggag caaatgaaga atctgaatga gcgaaaggaa cggcgtcatg
      541 tacttgagaa gaagttggct gattcagagg taaccgaaga agaacaaaac aatctactta
      601 aacatttgga gaagaaagaa actgaatata tgcgacttca gaggcataaa atgggcgctg
      661 atgattttga gccattgaca atgataggaa agggtgcatt cggggaggtt agaatatgca
      721 gggagaagac aactggcaat gtctatgcaa tgaaaaaatt aaaaaaatcc gaaatgctcc
      781 gtagaggcca ggttgagcat gtgaaagcag aaaggaacct acttgcagag gttgatagca
      841 attgcattgt taaactttat tgttcatttc aagatgaaga atatttatac ctcataatgg
      901 aatatctacc cgggggagat atgatgactt tactgatgcg aaaggatacg ttgactgaag
      961 atgaagctag gttttatgtt ggggaaactg ttttggcaat cgagtctatt cacaaacata
     1021 attatattca tagggatatt aaaccggaca acttgctgct tgataaattt gggcacatga
     1081 aattgtcaga ttttggattg tgtaagccat tagactgtac caatcttcaa gaaaaggatt
     1141 tttctggggc gaataattta agtgggaccc ttcaaaatga tgggcgccct gttgtgccaa
     1201 aacgtactca acaggagcaa cttcagcatt ggcagaggaa taggaggatg cttgcatatt
     1261 ccactgtcgg aacacctgat tatattgctc cagaagtttt gctgaagaaa ggatatggaa
     1321 tggaatgtga ttggtggtct cttggggcaa ttatgtatga aatgcttgtt ggatacccac
     1381 ccttctattc agatgagcca atggctactt gtagaaagat tgttaattgg agaactcatt
     1441 taaaatttcc cgaagaggct aaactgtctc ccgaggcaaa agatcttatc tgtaaacttc
     1501 tttgcaacgt tgaaaagagg cttggaacca aaggcgcata tgaaataaag gcacaccctt
     1561 ggtttaaagg aatagaatgg gaaaaattgt atcaaattga agctgcattt attcctgaag
     1621 taaatggcga gcttgatacc caaaattttg agaaatttga agagggggac aaccaaattt
     1681 cgtcgtcaac aaagtcaggc ccttggagaa agatgctatc ttctaaagat gtcaacttca
     1741 tggggtacac atataagaac ttcgaaatcg taaatgaaca tgaggttcca ggaattgctg
     1801 agttgaagaa aaagagttca aagcctaaga gacctacagt gaagtccctt tttaaagaag
     1861 aaacggactc aacatcctct caaaatcaag gaagttttct caacctccta cctcgacagt
     1921 ttgaagtctc gaaacaaaag gagtctacgt gaaccagtat tgttctgttc ataacggtca
     1981 tatattcata gttaaaaatc aattaaaagc aatgcaatgt tcttaattgc tgatcgacag
     2041 cttccggtta cacgggggtg ggtaaataca gaatgaaaga gggattttca gtttgttcaa
     2101 tttgcagacg aaaaatgatt tgtttgatga tattgtggat gatagaccat tttgtggctt
     2161 tcattttttc tgggtttcca agtctcttgt aaatttgttt attatcatta ttggactgtg
     2221 tatatttgtt cttgcattac ttgtagttgg tgtgtaacat atccagttgt caaggtaacg
     2281 tttatgggac ttgtaacttg caagtacttt gatagttaca gttttat
//
LOCUS       XM_071829941             613 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At4g14342-like (LOC139839785), mRNA.
ACCESSION   XM_071829941
VERSION     XM_071829941.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..613
                     /gene="LOC139839785"
                     /note="uncharacterized protein At4g14342-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839785"
     CDS             144..407
                     /gene="LOC139839785"
                     /codon_start=1
                     /product="uncharacterized protein At4g14342-like"
                     /protein_id="XP_071686042.1"
                     /db_xref="GeneID:139839785"
                     /translation="MQASDRFNINSQLEHLQAKYVGTGHADMNRFEWAVNIQRDSYAS
                     YVGHYPMLGYFAIAENESIGRERYNFMQKMLLPCGLPPEREEE"
     misc_feature    156..380
                     /gene="LOC139839785"
                     /note="Splicing factor 3B subunit 10 (SF3b10); Region:
                     SF3b10; pfam07189"
                     /db_xref="CDD:462114"
ORIGIN      
        1 catataaata catacatagt actccgtata tattatcttg cagaagaaag aaacctaaat
       61 aattcaatcg gaaccctaat ttgttcggca taattagcta atttgatcat ctgaaaatct
      121 gaacttatac caacagggac aacatgcagg ctagtgacag gtttaatatc aactcccagc
      181 ttgagcatct gcaagctaag tatgtaggaa caggtcatgc agacatgaac agatttgaat
      241 gggcggttaa tatccagaga gacagctatg cgtcatatgt tggccattat ccaatgcttg
      301 gctattttgc aattgccgaa aatgaatcaa ttgggagaga gcgctacaac tttatgcaga
      361 aaatgttgtt gccttgtgga cttccaccag aaagagaaga ggaatgaacg catgaagtgt
      421 tactatgcag aggttcaggg tcgtaattgt cattttgctt atgaacttgc tgtgaaactt
      481 ctgtagtatt gaccttgttg tgataagatg agataaaaat gattttatgc tggcttcgta
      541 tgttgttagt actctttgat tgtgaggttt attgtaatgt tttcgctaat aatatcgttt
      601 gttctattat ttt
//
LOCUS       XM_071829943            2308 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            PMT3 (LOC139839786), transcript variant X1, mRNA.
ACCESSION   XM_071829943
VERSION     XM_071829943.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2308
                     /gene="LOC139839786"
                     /note="probable methyltransferase PMT3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139839786"
     CDS             378..2231
                     /gene="LOC139839786"
                     /codon_start=1
                     /product="probable methyltransferase PMT3"
                     /protein_id="XP_071686044.1"
                     /db_xref="GeneID:139839786"
                     /translation="MRGRTDGSQKKRLLTTFVLVAVFLLFLYLYYGSQSKGESALEYG
                     SRSLRKLGSSYLGGDEESDLGVKDDFKFGLDDEDGIVPKSFPVCDDRYSELIPCLDRN
                     LIYQMRLKLDLSLMEHYERHCPLPERRFNCLIPPPTGYKVPIKWPKSRDEAWKANIPH
                     THLAHEKSDQNWMVVKGDKIIFPGGGTHFHKGADRYIKSLANMLNFPNDIMNNEGKLR
                     TVLDVGCGVASFGGYLLASDIITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPY
                     PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKE
                     MSALVERMCWKIAAKRNQTVIWVKPLTNDCYMERAPGTQPPLCRSNDDPDAVYGVNME
                     ACITPYSDHDHAGKGSGLAPWPRRLTAPPPRLADFGYSSDMYEKDTELWRRRVENYWD
                     LLSPKISTNTIRNVMDMKANLGSFGAALKTKDVWVMNVVPEDGPNTLKIIYDRGLIGS
                     IHNWCEAYSTYPRTYDLLHASNVFSDIIEKKGCSGVDLLIEIDRILRPTGFLIVRDKK
                     PVIDFVKKYLSAIHWETVAVADSSSESDGEDVVLIVQKKLWLTSEGLRETD"
     misc_feature    657..2189
                     /gene="LOC139839786"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; Region: Methyltransf_29; pfam03141"
                     /db_xref="CDD:335237"
ORIGIN      
        1 tcactgtcat acgctcatgc tttcagatct accccaactt attctgttca tatataaaat
       61 attcttctat atctatacat atcctacata tacatcaaat ttcacagtct acaatcgctt
      121 acacttcgat tggaaattca gaatctagat ctgtaatcgg gactcctgtg gataaggaat
      181 ataactggta tctggaatag tccaccatct ttcattctct acggaaactg gggagagcac
      241 ataatatcga gcattaataa ataccagatt cttcaactgt tatctattgg aaaaactatg
      301 agatcatact tgtgatctat aaagtttgca tttaagtggc cagttagcgt tgtggagtat
      361 ccaacgtaac gttagtaatg agaggacgga cagatggatc gcagaagaaa cgtttgctca
      421 cgacttttgt tcttgtagca gtcttccttc ttttcctgta tttgtattat ggttcccaga
      481 gtaaaggtga atcagctcta gagtatggca gccggtctct acggaaactt ggatcatcct
      541 acttaggtgg ggatgaagaa tccgatcttg gcgtgaaaga tgattttaaa tttggcttag
      601 atgatgaaga tggcattgtt ccaaaaagct ttcctgtttg tgatgatcga tactctgagt
      661 tgattccctg cctagaccgg aaccttatct accagatgag attaaagttg gatttgtctt
      721 taatggagca ctatgaaaga cactgccctc tccctgaaag gcgtttcaac tgcttgattc
      781 ctcccccaac agggtacaag gtcccgatca aatggccaaa gagtagagat gaagcatgga
      841 aagcaaacat accacacacc caccttgcac atgaaaagtc tgaccagaac tggatggttg
      901 ttaaaggtga taagatcata ttccctggtg gaggaactca tttccacaaa ggagctgata
      961 gatacatcaa atcacttgca aatatgctca acttccctaa tgatatcatg aacaatgaag
     1021 gaaaattaag aaccgttctt gatgttggtt gtggtgttgc aagttttggg ggttatcttc
     1081 ttgcatccga catcatcaca atgtctttag cacctaatga cgtgcatcaa aatcagatcc
     1141 aattcgcttt agaaagaggc attcccgcat atcttggtgt tcttggcaca aaaagacttc
     1201 cttatcccag cagatctttt gaacttgctc attgttctcg ttgtagaatc gattggcttc
     1261 aaagggatgg tatactactt cttgagttag ataggttgct tagaccaggt ggctattttg
     1321 cctactcatc accagaagct tatgcacaag atgaagaaga ccttagaata tggaaagaaa
     1381 tgagtgcact tgttgaacga atgtgctgga aaatagctgc aaaaaggaac caaactgtta
     1441 tttgggttaa acctttgact aatgattgtt atatggagag agctcctggc actcaacctc
     1501 ctttgtgccg atcaaatgac gatccagatg cggtgtatgg cgttaacatg gaagcttgca
     1561 tcacacctta ctcggatcat gatcatgcag gtaaaggaag tggattggct ccatggcctc
     1621 gcaggctaac tgctccccct cctcgtcttg ctgactttgg ctattcaagt gatatgtatg
     1681 agaaggacac ggagttgtgg cgtcggaggg ttgagaacta ctgggatcta ttgagcccaa
     1741 aaatatcgac aaacactata aggaatgtga tggacatgaa ggcaaatttg ggttcatttg
     1801 gagctgcttt gaagaccaaa gatgtttggg taatgaatgt tgtccctgaa gatggaccaa
     1861 atacattgaa gattatttat gatagaggct taatcggctc aattcataac tggtgtgaag
     1921 catactcaac ctaccctcga acatacgatc ttctccatgc cagcaacgtg ttctcagaca
     1981 tcatcgagaa gaagggttgc agtggtgtag atcttttaat cgagatagac cgtattctaa
     2041 ggccaacagg tttcctaatt gttcgagaca aaaaacccgt cattgacttc gtaaagaaat
     2101 atctaagcgc aatacactgg gaaacagttg cagtggcaga ttcatcatca gaatcagatg
     2161 gagaagacgt tgtgctgata gttcaaaaga aactttggct cacaagtgaa ggcttaaggg
     2221 aaacagacta agtttttgaa cctgattacc atttttagaa aatggtatta aaagaaggaa
     2281 aatggttctg ttttgtagta tgattgcg
//
LOCUS       XM_071829944            2316 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            PMT3 (LOC139839786), transcript variant X2, mRNA.
ACCESSION   XM_071829944
VERSION     XM_071829944.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2316
                     /gene="LOC139839786"
                     /note="probable methyltransferase PMT3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139839786"
     CDS             386..2239
                     /gene="LOC139839786"
                     /codon_start=1
                     /product="probable methyltransferase PMT3"
                     /protein_id="XP_071686045.1"
                     /db_xref="GeneID:139839786"
                     /translation="MRGRTDGSQKKRLLTTFVLVAVFLLFLYLYYGSQSKGESALEYG
                     SRSLRKLGSSYLGGDEESDLGVKDDFKFGLDDEDGIVPKSFPVCDDRYSELIPCLDRN
                     LIYQMRLKLDLSLMEHYERHCPLPERRFNCLIPPPTGYKVPIKWPKSRDEAWKANIPH
                     THLAHEKSDQNWMVVKGDKIIFPGGGTHFHKGADRYIKSLANMLNFPNDIMNNEGKLR
                     TVLDVGCGVASFGGYLLASDIITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPY
                     PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKE
                     MSALVERMCWKIAAKRNQTVIWVKPLTNDCYMERAPGTQPPLCRSNDDPDAVYGVNME
                     ACITPYSDHDHAGKGSGLAPWPRRLTAPPPRLADFGYSSDMYEKDTELWRRRVENYWD
                     LLSPKISTNTIRNVMDMKANLGSFGAALKTKDVWVMNVVPEDGPNTLKIIYDRGLIGS
                     IHNWCEAYSTYPRTYDLLHASNVFSDIIEKKGCSGVDLLIEIDRILRPTGFLIVRDKK
                     PVIDFVKKYLSAIHWETVAVADSSSESDGEDVVLIVQKKLWLTSEGLRETD"
     misc_feature    665..2197
                     /gene="LOC139839786"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; Region: Methyltransf_29; pfam03141"
                     /db_xref="CDD:335237"
ORIGIN      
        1 tcactgtcat acgctcatgc tttcagatct accccaactt attctgttca tatataaaat
       61 attcttctat atctatacat atcctacata tacatcaaat ttcacagtct acaatcgctt
      121 acacttcgat tggaaattca gaatctagat ctgtaatcgg gactcctcat tacaggtgga
      181 taaggaatat aactggtatc tggaatagtc caccatcttt cattctctac ggaaactggg
      241 gagagcacat aatatcgagc attaataaat accagattct tcaactgtta tctattggaa
      301 aaactatgag atcatacttg tgatctataa agtttgcatt taagtggcca gttagcgttg
      361 tggagtatcc aacgtaacgt tagtaatgag aggacggaca gatggatcgc agaagaaacg
      421 tttgctcacg acttttgttc ttgtagcagt cttccttctt ttcctgtatt tgtattatgg
      481 ttcccagagt aaaggtgaat cagctctaga gtatggcagc cggtctctac ggaaacttgg
      541 atcatcctac ttaggtgggg atgaagaatc cgatcttggc gtgaaagatg attttaaatt
      601 tggcttagat gatgaagatg gcattgttcc aaaaagcttt cctgtttgtg atgatcgata
      661 ctctgagttg attccctgcc tagaccggaa ccttatctac cagatgagat taaagttgga
      721 tttgtcttta atggagcact atgaaagaca ctgccctctc cctgaaaggc gtttcaactg
      781 cttgattcct cccccaacag ggtacaaggt cccgatcaaa tggccaaaga gtagagatga
      841 agcatggaaa gcaaacatac cacacaccca ccttgcacat gaaaagtctg accagaactg
      901 gatggttgtt aaaggtgata agatcatatt ccctggtgga ggaactcatt tccacaaagg
      961 agctgataga tacatcaaat cacttgcaaa tatgctcaac ttccctaatg atatcatgaa
     1021 caatgaagga aaattaagaa ccgttcttga tgttggttgt ggtgttgcaa gttttggggg
     1081 ttatcttctt gcatccgaca tcatcacaat gtctttagca cctaatgacg tgcatcaaaa
     1141 tcagatccaa ttcgctttag aaagaggcat tcccgcatat cttggtgttc ttggcacaaa
     1201 aagacttcct tatcccagca gatcttttga acttgctcat tgttctcgtt gtagaatcga
     1261 ttggcttcaa agggatggta tactacttct tgagttagat aggttgctta gaccaggtgg
     1321 ctattttgcc tactcatcac cagaagctta tgcacaagat gaagaagacc ttagaatatg
     1381 gaaagaaatg agtgcacttg ttgaacgaat gtgctggaaa atagctgcaa aaaggaacca
     1441 aactgttatt tgggttaaac ctttgactaa tgattgttat atggagagag ctcctggcac
     1501 tcaacctcct ttgtgccgat caaatgacga tccagatgcg gtgtatggcg ttaacatgga
     1561 agcttgcatc acaccttact cggatcatga tcatgcaggt aaaggaagtg gattggctcc
     1621 atggcctcgc aggctaactg ctccccctcc tcgtcttgct gactttggct attcaagtga
     1681 tatgtatgag aaggacacgg agttgtggcg tcggagggtt gagaactact gggatctatt
     1741 gagcccaaaa atatcgacaa acactataag gaatgtgatg gacatgaagg caaatttggg
     1801 ttcatttgga gctgctttga agaccaaaga tgtttgggta atgaatgttg tccctgaaga
     1861 tggaccaaat acattgaaga ttatttatga tagaggctta atcggctcaa ttcataactg
     1921 gtgtgaagca tactcaacct accctcgaac atacgatctt ctccatgcca gcaacgtgtt
     1981 ctcagacatc atcgagaaga agggttgcag tggtgtagat cttttaatcg agatagaccg
     2041 tattctaagg ccaacaggtt tcctaattgt tcgagacaaa aaacccgtca ttgacttcgt
     2101 aaagaaatat ctaagcgcaa tacactggga aacagttgca gtggcagatt catcatcaga
     2161 atcagatgga gaagacgttg tgctgatagt tcaaaagaaa ctttggctca caagtgaagg
     2221 cttaagggaa acagactaag tttttgaacc tgattaccat ttttagaaaa tggtattaaa
     2281 agaaggaaaa tggttctgtt ttgtagtatg attgcg
//
LOCUS       XM_071829945            3199 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate receptor 2.7-like
            (LOC139839787), mRNA.
ACCESSION   XM_071829945
VERSION     XM_071829945.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3199
                     /gene="LOC139839787"
                     /note="glutamate receptor 2.7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839787"
     CDS             276..3071
                     /gene="LOC139839787"
                     /codon_start=1
                     /product="glutamate receptor 2.7-like"
                     /protein_id="XP_071686046.1"
                     /db_xref="GeneID:139839787"
                     /translation="METHFLVTVMVIMSLICTTIAKTKIEIGVILDLETSIGKMSSTC
                     ISMALNDFYQQHENYTTEIHLQFRDSKQDNVQAASAAIDLLKNVQVMAIIGPTTSSQA
                     DFVIDIGNKSKVPIISPATSPSLSLHDNVYFIRTAPDSTTQLKPIAELIKHFGWREIV
                     FIYEEGEYGRGLASYLSDAMLTIGTKVMYRTSIHHSASDDRILEKLYKLKTMQTRVFI
                     VHALPDLAERFFRKVNEAGMMEKGYVWIMTEVLTSRLHSMDHTSIDSMQGVLGVKSYI
                     SRSTQLVNFEKRWKRESDRRYPDDDVAELDMFGIWSYDTLFALAMAFEKAGVEINKNT
                     TFKRQRQPTTDLDAIGTSEMGPRLITWLRNSSFKGLSGDFEIVDGQLKSSVYQIVNII
                     GRGDNPIGFWTTKKGILKNLNDQTKDLKAITWPGDTHVVPKGWEIATSNENNLRVGVP
                     AKGGFVQFIDANTDPQTQQVIVTGFCVDVFNAVIGALPYAVKHEFIPFVTSDGKRPAG
                     TYNDLLYNLSDAKYDAVVGDVTILAERSDYVDFTLPYTEAGVAMIVPIKDERKSAWIF
                     MRPLEKGLWITIGAFFIYTGFVVWVLEHRVNKEFRGTPHQQIGMIFWFSFSTLVYAHR
                     EKLISNLSRFVVIVWVFVVLVLTSSYTASLTSMLTVQQLQPKYTDIIKIMRNGESVGY
                     QDGSFVFNMLIKMGFDDSKLKNYTTFEQYDHALEIGSQRGGVSAIMDELPYIRVFLAQ
                     YCTKYTMTGPTYKTAGFGFAFPKGSPLVHDVSRAVLQVTEEQMTNISKQWFGETVTCD
                     QQNEATVASDRLTLDSFKGLFLIAGLSSTSALVIFLLTFLYQNRQMLVSQSSVSEKLA
                     AIARTYDRFKDDVSKSTVPEAAVVKVVSDDNTNSPEIGEFHQEAVVLSHDEGFSTTEP
                     GTPVSDTIQVVNTTIEI"
     misc_feature    354..1511
                     /gene="LOC139839787"
                     /note="periplasmic ligand-binding domain of Arabidopsis
                     thaliana glutamate receptors and its close homologs in
                     other plants; Region: PBP1_GABAb_receptor_plant; cd19990"
                     /db_xref="CDD:380645"
     misc_feature    order(393..395,630..635,1197..1199)
                     /gene="LOC139839787"
                     /note="putative ligand binding site [chemical binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    order(498..500,507..509,594..596,849..851)
                     /gene="LOC139839787"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    1608..2648
                     /gene="LOC139839787"
                     /note="Plant glutamate receptor domain; the type 2
                     periplasmic binding protein fold; Region: GluR_Plant;
                     cd13686"
                     /db_xref="CDD:270404"
     misc_feature    1995..2747
                     /gene="LOC139839787"
                     /note="Ligand-gated ion channel; Region: Lig_chan;
                     pfam00060"
                     /db_xref="CDD:459656"
ORIGIN      
        1 aatggtcccg aaataaccca gttaaagaga accgtgtcgg tttaaaaact tgaaattggg
       61 cgcttgaatg ttgacgaggt ataaaaaaat gactcgttaa aaggttgacc caagcaaact
      121 tgtgttacct aaagttaaat tctagaagtc ggcagttacg tacaaccaat gatgtctatt
      181 tccttatatc tgttatgcag ctcatgctca tgctttaaca tcagaaagaa tttaaagaat
      241 ataaaaagtg acctcttttt ggaaattata cctacatgga gacccatttt ttagtcactg
      301 ttatggttat catgagctta atatgtacaa caattgcaaa aacaaagata gaaataggtg
      361 tcattttgga tctggaaaca agcattggta agatgagcag tacctgcatt tcaatggcgt
      421 taaacgattt ctatcagcaa cacgaaaact ataccactga aattcacctt cagtttcgtg
      481 attccaaaca agataatgtg caagcagcgt cagcagccat cgacctcttg aaaaacgttc
      541 aagtcatggc gattatagga ccaacgacat cttcacaggc tgatttcgtg attgatattg
      601 gtaacaaatc aaaggttcct attatctcac ctgcaactag cccttcactt tctttacacg
      661 acaacgttta cttcattcga actgcacctg attcaaccac tcaactcaaa cccatagcag
      721 aattgatcaa acactttggt tggagagaaa tagtattcat ttatgaagaa ggtgaatacg
      781 gaagaggcct tgcttcttac ttatctgacg cgatgttgac tatcggtacg aaagtcatgt
      841 accgtacctc tatacatcat tctgcttcag acgatcggat tcttgaaaag ctttacaagt
      901 tgaagacgat gcagacacga gttttcattg tacacgcgtt gcctgatttg gcggagcgtt
      961 tttttaggaa agtgaatgaa gctggaatga tggaaaaagg gtatgtttgg atcatgactg
     1021 aagtgcttac gagtcgttta cattctatgg atcatacgag tatagattcg atgcaaggag
     1081 tacttggagt aaagtcatat atctcaaggt caacccagct agtcaacttt gagaaaagat
     1141 ggaaacgaga gtctgaccgt cgatatccag atgatgatgt ggcggaatta gacatgtttg
     1201 ggatatggtc ttatgatacc ctttttgcac ttgcaatggc gttcgagaaa gcaggggtgg
     1261 agataaataa aaataccact ttcaaacgac aacgacaacc cacgacagat ttggatgcca
     1321 ttggaacatc cgaaatgggg ccgcggctca ttacatggct ccgtaactca agctttaaag
     1381 gactgagtgg agattttgaa attgttgatg gtcaactaaa atcatcagtg taccaaatag
     1441 tgaacataat aggaagggga gataacccta ttgggttttg gacaactaaa aaaggtattt
     1501 taaagaattt aaacgatcaa acaaaggatc ttaaggctat cacatggccc ggcgacactc
     1561 atgtggtccc taaaggctgg gagattgcaa ccagcaacga aaacaatttg cgagtcgggg
     1621 ttccagcaaa aggagggttt gttcagttta tcgatgccaa taccgaccct caaactcaac
     1681 aagttatcgt tactggtttt tgcgtggacg tatttaatgc agtcatcggt gctttgcctt
     1741 atgctgtcaa acatgaattc ataccttttg ttacttcaga cggcaagaga cctgcaggaa
     1801 cttataatga tcttctttac aatctctctg atgcgaaata cgatgcagta gttggagatg
     1861 ttacaatcct tgcagagcgt tcagattacg ttgatttcac attgccatac acagaggccg
     1921 gtgttgcaat gattgttccg atcaaggatg agaggaaaag cgcatggatc ttcatgagac
     1981 cgctagaaaa aggactttgg ataacaattg gggcattttt catatacaca ggatttgtgg
     2041 tatgggtttt ggagcatcgc gtaaacaagg aattccgagg caccccacat caacaaattg
     2101 gaatgatctt ctggttttcc ttctccacac tcgtgtatgc acacagagag aagttgataa
     2161 gcaacttatc gagatttgta gtgattgtgt gggtgtttgt ggtgctggtg ttgacatcga
     2221 gctacacagc aagcttgaca tccatgttaa ctgtgcaaca gcttcaacct aagtacacgg
     2281 atatcataaa gatcatgaga aatggtgaat cagtaggata ccaagatggt tcttttgttt
     2341 ttaacatgtt gataaaaatg ggtttcgatg atagcaagtt aaaaaactac accacatttg
     2401 agcagtatga ccatgccctt gaaatcggta gccaaagagg aggtgtttcc gcaattatgg
     2461 atgaactccc ttatattaga gttttcttgg ctcaatattg taccaagtat accatgaccg
     2521 gccccaccta caaaaccgca ggcttcggat ttgcatttcc aaaaggttct ccattagttc
     2581 acgatgtttc tagagcggtt ctgcaagtta cagaagagca aatgaccaac atttccaagc
     2641 aatggtttgg agaaacagtc acttgcgatc aacagaatga agctacagta gcatctgaca
     2701 ggctcacgct cgatagcttc aagggactat ttctcattgc tgggttatca tccacttctg
     2761 ctcttgtgat tttcttactc acatttttgt atcaaaatag acaaatgtta gtatcacaaa
     2821 gttcagtaag cgaaaagctt gctgcaattg cgagaacata cgacagattt aaagacgatg
     2881 tgtccaaaag tacggtgcca gaggctgcag tagttaaagt ggttagtgat gataatacta
     2941 acagtccaga aattggtgaa ttccatcaag aagcggtggt attatctcac gatgaagggt
     3001 tttcgacaac tgaaccgggg actccggtta gtgacacaat acaagttgta aatactacca
     3061 tagagatcta ggtgttgtga cagtaatgtc tctaatgcaa atgtaacatg taaccctttg
     3121 atattatgtg gtcacttcta acatacaaac ttttctattt gcattgtagt ctgtcctatc
     3181 gcagatataa atcactagg
//
LOCUS       XM_071829946            1365 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bifunctional
            nitrilase/nitrile hydratase NIT4B-like (LOC139839788), mRNA.
ACCESSION   XM_071829946
VERSION     XM_071829946.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1365
                     /gene="LOC139839788"
                     /note="bifunctional nitrilase/nitrile hydratase
                     NIT4B-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 26 Proteins"
                     /db_xref="GeneID:139839788"
     CDS             124..1164
                     /gene="LOC139839788"
                     /codon_start=1
                     /product="bifunctional nitrilase/nitrile hydratase
                     NIT4B-like"
                     /protein_id="XP_071686047.1"
                     /db_xref="GeneID:139839788"
                     /translation="MAVEPTIGSDGAVITEVDMGSSDSSSTVRATVIQASTILYDTLA
                     TLDKAERLLAEAASYGSQLVVFPEAFVGGYPRGSNFGVTIGSRSLKGKEDFRKYHAAA
                     INVPGPEVDRLAAMAGKYKVFLVMGVIERDGYTLYCTVLFFDNQGCYLGKHRKLMPTA
                     LERIIWGFGDGSHIPVFDTPIGKIGAAICWENKMPLLRTAMYAKGIEIYCAPTADSRE
                     VWQASMTHIALEGGCFVLSANQFCRRKDYPAPPEYVFNGTDEDLTPESVVCAGGSVII
                     SPSGAVLAGPNYDGEALITADLDLGEIARAKFDFDVVGHYARPEVLSLIVRDDPANPV
                     TFTSEKTESSQK"
     misc_feature    133..1161
                     /gene="LOC139839788"
                     /note="nitrilase; Region: PLN02504"
                     /db_xref="CDD:178120"
     misc_feature    order(325..327,586..588,598..600,607..609,688..693,
                     697..702,760..762)
                     /gene="LOC139839788"
                     /note="putative active site [active]"
                     /db_xref="CDD:143588"
     misc_feature    order(325..327,586..588,688..690)
                     /gene="LOC139839788"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143588"
     misc_feature    order(589..600,604..606,625..633,691..693,697..711,
                     715..720,787..792,796..804,808..813,934..939,1066..1080)
                     /gene="LOC139839788"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:143588"
ORIGIN      
        1 ctccactcgc ttctagactc gctctatact catcttcccc atcgtcactt tggcagggaa
       61 ctctcatatt caaccgttga ctagtcaact tgttaaaaga aacaacatag tggaagtgaa
      121 tcaatggcag ttgagccaac aatcgggagc gatggtgctg tgattactga agtcgacatg
      181 ggttcatctg attctagctc aacggttcga gccactgtta tccaagcctc caccatatta
      241 tatgacaccc ttgctactct tgataaggct gagaggttgc tagctgaagc ggcttcgtac
      301 ggatcccaat tagttgtgtt tccagaagca tttgtgggtg gatatcctcg tgggtcgaat
      361 tttggtgtga caatcggtag ccgctcgctt aagggtaaag aagatttccg caagtaccat
      421 gctgcagcca tcaatgtacc tggtcccgaa gttgatagat tggcagcaat ggcaggaaaa
      481 tataaagtat ttttggtgat gggagtaata gagagagatg ggtatactct ttattgtacg
      541 gttttgtttt tcgataatca aggatgctac ctcgggaaac acaggaagct gatgccgaca
      601 gcgttggaac gcataatttg gggatttggt gacgggtcac acatacccgt tttcgatact
      661 ccaattggta aaattggtgc tgctatttgt tgggagaata aaatgccact gctaaggacg
      721 gcaatgtatg ctaaaggaat tgaaatatat tgtgcaccaa cagctgattc gagggaagtt
      781 tggcaagcat cgatgaccca tatcgcattg gagggtggat gctttgtttt atcagcaaac
      841 cagttttgta gacgtaaaga ttaccctgct cccccagaat atgtttttaa tggaacagat
      901 gaagatctta caccagaatc tgttgtatgt gctggcggca gtgtcattat ttcaccatcg
      961 ggggcagttc ttgcaggacc gaattatgac ggtgaagcac ttattacagc tgatttagac
     1021 ctcggagaaa tagctcgggc aaagtttgac tttgatgtgg tagggcatta tgcgagaccc
     1081 gaagtgctta gccttatcgt gagggatgat ccagcaaatc cggtaacttt cacatcagaa
     1141 aagactgaaa gctcccagaa ataactttgt aaggatatca ttgatttctg ttgttgtaca
     1201 tgatggattt accaaactac ccttgatatt tcttgaacaa atcagtctta cttttggtga
     1261 attaatcaga caatgaagtt tgagaatttc atctacaaat acttcttgaa tattgtttca
     1321 gtattatctt acactgttta gggatggcat atgtaacagt tttta
//
LOCUS       XM_071829947            1174 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein LIGHT-DEPENDENT
            SHORT HYPOCOTYLS 4-like (LOC139839789), mRNA.
ACCESSION   XM_071829947
VERSION     XM_071829947.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1174
                     /gene="LOC139839789"
                     /note="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139839789"
     CDS             362..958
                     /gene="LOC139839789"
                     /codon_start=1
                     /product="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like"
                     /protein_id="XP_071686048.1"
                     /db_xref="GeneID:139839789"
                     /translation="MEKFHSFTIDHHVVPQVQDDSSITTNLLSPTTSSSSSNSSPTTT
                     LSRYENQKRRDWNTFGQYLRNHRPPLNLSLCSGAHVLEFLKYLDQFGKTKVHTQLCPF
                     FGHPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGNPETNPFGARAVRLYLRDVRD
                     SQAKARGISYEKKKRKRPLQLPPSQTSSPPPPLPPHIS"
     misc_feature    500..841
                     /gene="LOC139839789"
                     /note="ALOG domain; Region: ALOG_dom; pfam04852"
                     /db_xref="CDD:398493"
ORIGIN      
        1 aattgtccat atatcactta tctatgctct ccctattcct ctgtagctag tacacttgca
       61 gttgtataac cttcttttag gtaataagat tgaaaaataa ctactcattt ctgcccatat
      121 atcgatctac cggcctcttt gttcacttta tcataatcca ttattgtcta ccttttttca
      181 tgcttaaaca ttcatttcat cataaatctt gaaatcttga tctacaccca catgtacttc
      241 aagaatcccg atgaacacaa caaaacccta aaattccatc taaaccaaaa ttagggtttc
      301 ttaaaacttt actaacaacc tagtttaagt tcacttaaat atatctttct gttaaccaaa
      361 aatggaaaaa tttcactcat ttaccataga tcatcatgtt gtaccacaag ttcaagatga
      421 ctcatctatc acaacaaacc ttttaagccc tacaacctca tcttcatctt ctaactcttc
      481 tccgaccacc acactcagcc gttacgagaa ccaaaaacgc cgtgactgga acacgttcgg
      541 tcagtacctc cgtaaccacc ggccaccgtt gaatctttca ctgtgcagtg gtgcacatgt
      601 tcttgaattc ttgaagtatc ttgaccaatt tggtaagaca aaagttcaca cacaactttg
      661 tccatttttc ggtcacccta atccaccagc accctgcccg tgtccactca gacaagcttg
      721 gggcagcctt gatgcactcg tcggccgtct ccgggcagct tttgaagaaa acggtgggaa
      781 cccggaaact aatccatttg gagcacgggc tgttaggctt tatttacgtg atgttaggga
      841 ttcacaagct aaagcaagag ggattagtta tgaaaagaag aaaagaaagc ggccactgca
      901 gcttccgccg tcgcaaacgt catcaccgcc gccgccgttg ccaccgcata tttcttgatc
      961 aagtttgctg cttttcgagt cacaaaagga aagtgaattc tactcaatta tttggtgaaa
     1021 tacccattta aaattaagtg ataggtatgc aactatatac tgttcttcca agttgatttt
     1081 tttttttttt tttttttttc agtttcttga attttattat ctttgattat cattatttta
     1141 tgatattggt ggtggtggta ttataatgat tcaa
//
LOCUS       XM_071829948            2005 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mediator of RNA polymerase
            II transcription subunit 8-like (LOC139839790), transcript variant
            X1, mRNA.
ACCESSION   XM_071829948
VERSION     XM_071829948.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2005
                     /gene="LOC139839790"
                     /note="mediator of RNA polymerase II transcription subunit
                     8-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139839790"
     CDS             99..1730
                     /gene="LOC139839790"
                     /codon_start=1
                     /product="mediator of RNA polymerase II transcription
                     subunit 8-like isoform X1"
                     /protein_id="XP_071686049.1"
                     /db_xref="GeneID:139839790"
                     /translation="MDGPAALGQGHTQPQQEQAAAKVVERLNPAVQQQLNLESVKTRA
                     VSLFKAISRILEDFDHIARTNSSPKWQDVLGQFSMVNLELYNIVEDIKKVSKAFVVHP
                     KNVNAENAAILPVMISSKLLPEIEADDNSKREQLLYAMQNLSVPMQLEKLKARIDMIG
                     AACESAEKVIADTRKTYFGTRQGPTNILTLDKAQAAKIQEQENLLRHAVNHGQGLRIP
                     MDQRQITSGLPAHLADVLPVADTSQTISESSGMYMKNTPPMASNAVNNQGALMQGSGS
                     QLMGRAAASPGGTVMSSFDNTTASPLPYANSPRSGSNMMNTPSPQQQTQLQQQQQQQL
                     QQQQQQQQQQQQQRQRLMQLPPHQQQILAQQLRQNPMAGLGQLHGQNQMQFSQSLGGQ
                     QQFQGRQLPSGGIQHSMGQSQLNQGNQLNRQFNQMSSTANSALFNAAQATPNNQMMSN
                     MSAMMPSQPLVPRMQFGLSGGNRTLGSQMNDQVFSNMGASNPNNMMPIQQQQQQTGSQ
                     GSFGNMQQNTQNLQPTMVPMQNLQQNFQQQRQNQQ"
ORIGIN      
        1 tacatgtata ctacgacatg tgcgaaacac atgacttttt ccttgcgcct tcgtgttctc
       61 caacttcaaa actgaaaccc tagatttgat aatcagtgat ggatggtccg gcggcattag
      121 gtcaaggaca tacgcaaccg caacaagaac aagccgcagc taaagttgtg gaaaggctaa
      181 atcctgcagt gcagcagcaa cttaacctag aatctgttaa gactagagcc gtcagtctct
      241 ttaaagccat ttctcgtatc cttgaagatt tcgatcacat tgctcgcact aattccagtc
      301 ctaagtggca agatgtatta ggtcagtttt cgatggtaaa ccttgagctg tataacattg
      361 tggaagatat taagaaggtt tcgaaggctt ttgttgtcca tccgaagaac gttaatgctg
      421 aaaatgctgc aattttgccg gttatgattt catcgaagct attgccagag atagaagcag
      481 acgataattc caagcgagaa cagttactat atgctatgca gaatctatcc gtacccatgc
      541 aacttgaaaa gctaaaggcg agaattgaca tgattggagc agcttgtgaa agtgctgaaa
      601 aagtcattgc tgatactagg aaaacctact ttggcactcg tcagggcccc acaaatatct
      661 tgactttaga taaggctcaa gctgctaaaa ttcaggaaca ggaaaattta ctgagacatg
      721 ctgttaatca tggtcaaggt ttacgtatac ccatggacca aagacagatc acatcaggac
      781 ttccggctca tttggctgat gtgctcccag tagctgacac ctcgcagaca atttccgagt
      841 catctggtat gtacatgaag aatacacctc caatggcttc gaatgctgta aacaaccaag
      901 gagcattgat gcagggttct gggtcacaac tgatgggtcg agcagctgct tctcctggtg
      961 gcactgtgat gtcatccttc gataacacaa cagcatcacc actgccatac gcaaactcac
     1021 ccaggtctgg ctccaacatg atgaatacac cctctccaca acaacaaact cagctacaac
     1081 aacaacaaca acaacaactt caacagcaac aacaacaaca acaacaacaa caacaacaaa
     1141 ggcagagatt gatgcagtta cctccgcatc agcagcaaat cctggctcaa caacttagac
     1201 aaaatccgat ggctggatta gggcagttac atggtcaaaa tcaaatgcaa ttttctcagt
     1261 cattgggggg ccagcagcag tttcagggaa ggcaactacc ttctggaggt attcagcata
     1321 gtatgggtca aagtcaacta aatcaaggaa atcagttgaa tcgtcaattt aaccaaatgt
     1381 ctagcactgc caacagtgcg ttgtttaatg ctgcacaggc tacaccaaat aaccaaatga
     1441 tgtcgaatat gtcagccatg atgccatcac aaccactagt gcctcgaatg cagtttggat
     1501 tatctggtgg caaccgcact cttggttccc aaatgaacga ccaggtgttc tccaacatgg
     1561 gtgcatccaa tcctaataac atgatgccta tacagcagca acagcaacag actggttcac
     1621 aaggttcttt tgggaacatg caacaaaata cccagaatct tcaacctact atggtaccaa
     1681 tgcagaacct tcaacagaac tttcaacaac agagacagaa ccaacagtga tcctatagag
     1741 ccacaaaact tgactgttta ctaagttatg taaggtatct aatcgtttac aataaacaag
     1801 aacatgggaa attttaatat catcaatgct tctagcaaaa gagaccaggt taaaaacact
     1861 acaaacttct caaatagaag ccaattattg tctaattgta gattctagtc aaatgaatta
     1921 tcgaaacgta gctttaaagt agtcgttaac attcataaaa ggttgtacgt gacagttagt
     1981 tatcaattat aaatggcgct tacaa
//
LOCUS       XM_071829949            1972 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mediator of RNA polymerase
            II transcription subunit 8-like (LOC139839790), transcript variant
            X2, mRNA.
ACCESSION   XM_071829949
VERSION     XM_071829949.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1972
                     /gene="LOC139839790"
                     /note="mediator of RNA polymerase II transcription subunit
                     8-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139839790"
     CDS             99..1697
                     /gene="LOC139839790"
                     /codon_start=1
                     /product="mediator of RNA polymerase II transcription
                     subunit 8-like isoform X2"
                     /protein_id="XP_071686050.1"
                     /db_xref="GeneID:139839790"
                     /translation="MDGPAALGQGHTQPQQEQAAAKVVERLNPAVQQQLNLESVKTRA
                     VSLFKAISRILEDFDHIARTNSSPKWQDVLGQFSMVNLELYNIVEDIKKVSKAFVVHP
                     KNVNAENAAILPVMISSKLLPEIEADDNSKREQLLYAMQNLSVPMQLEKLKARIDMIG
                     AACESAEKVIADTRKTYFGTRQGPTNILTLDKAQAAKIQEQENLLRHAVNHGQGLRIP
                     MDQRQITSGLPAHLADVLPVADTSQTISESSGMYMKNTPPMASNAVNNQGALMQGSGS
                     QLMGRAAASPGGTVMSSFDNTTASPLPYANSPRSGSNMMNTPSPQQQTQLQQQQQQQL
                     QQQQQQQQQQQQQRQRLMQLPPHQQQILAQQLRQNPMAGLGQSLGGQQQFQGRQLPSG
                     GIQHSMGQSQLNQGNQLNRQFNQMSSTANSALFNAAQATPNNQMMSNMSAMMPSQPLV
                     PRMQFGLSGGNRTLGSQMNDQVFSNMGASNPNNMMPIQQQQQQTGSQGSFGNMQQNTQ
                     NLQPTMVPMQNLQQNFQQQRQNQQ"
ORIGIN      
        1 tacatgtata ctacgacatg tgcgaaacac atgacttttt ccttgcgcct tcgtgttctc
       61 caacttcaaa actgaaaccc tagatttgat aatcagtgat ggatggtccg gcggcattag
      121 gtcaaggaca tacgcaaccg caacaagaac aagccgcagc taaagttgtg gaaaggctaa
      181 atcctgcagt gcagcagcaa cttaacctag aatctgttaa gactagagcc gtcagtctct
      241 ttaaagccat ttctcgtatc cttgaagatt tcgatcacat tgctcgcact aattccagtc
      301 ctaagtggca agatgtatta ggtcagtttt cgatggtaaa ccttgagctg tataacattg
      361 tggaagatat taagaaggtt tcgaaggctt ttgttgtcca tccgaagaac gttaatgctg
      421 aaaatgctgc aattttgccg gttatgattt catcgaagct attgccagag atagaagcag
      481 acgataattc caagcgagaa cagttactat atgctatgca gaatctatcc gtacccatgc
      541 aacttgaaaa gctaaaggcg agaattgaca tgattggagc agcttgtgaa agtgctgaaa
      601 aagtcattgc tgatactagg aaaacctact ttggcactcg tcagggcccc acaaatatct
      661 tgactttaga taaggctcaa gctgctaaaa ttcaggaaca ggaaaattta ctgagacatg
      721 ctgttaatca tggtcaaggt ttacgtatac ccatggacca aagacagatc acatcaggac
      781 ttccggctca tttggctgat gtgctcccag tagctgacac ctcgcagaca atttccgagt
      841 catctggtat gtacatgaag aatacacctc caatggcttc gaatgctgta aacaaccaag
      901 gagcattgat gcagggttct gggtcacaac tgatgggtcg agcagctgct tctcctggtg
      961 gcactgtgat gtcatccttc gataacacaa cagcatcacc actgccatac gcaaactcac
     1021 ccaggtctgg ctccaacatg atgaatacac cctctccaca acaacaaact cagctacaac
     1081 aacaacaaca acaacaactt caacagcaac aacaacaaca acaacaacaa caacaacaaa
     1141 ggcagagatt gatgcagtta cctccgcatc agcagcaaat cctggctcaa caacttagac
     1201 aaaatccgat ggctggatta gggcagtcat tggggggcca gcagcagttt cagggaaggc
     1261 aactaccttc tggaggtatt cagcatagta tgggtcaaag tcaactaaat caaggaaatc
     1321 agttgaatcg tcaatttaac caaatgtcta gcactgccaa cagtgcgttg tttaatgctg
     1381 cacaggctac accaaataac caaatgatgt cgaatatgtc agccatgatg ccatcacaac
     1441 cactagtgcc tcgaatgcag tttggattat ctggtggcaa ccgcactctt ggttcccaaa
     1501 tgaacgacca ggtgttctcc aacatgggtg catccaatcc taataacatg atgcctatac
     1561 agcagcaaca gcaacagact ggttcacaag gttcttttgg gaacatgcaa caaaataccc
     1621 agaatcttca acctactatg gtaccaatgc agaaccttca acagaacttt caacaacaga
     1681 gacagaacca acagtgatcc tatagagcca caaaacttga ctgtttacta agttatgtaa
     1741 ggtatctaat cgtttacaat aaacaagaac atgggaaatt ttaatatcat caatgcttct
     1801 agcaaaagag accaggttaa aaacactaca aacttctcaa atagaagcca attattgtct
     1861 aattgtagat tctagtcaaa tgaattatcg aaacgtagct ttaaagtagt cgttaacatt
     1921 cataaaaggt tgtacgtgac agttagttat caattataaa tggcgcttac aa
//
LOCUS       XM_071829950            1540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 7-dehydrocholesterol
            reductase-like (LOC139839792), mRNA.
ACCESSION   XM_071829950
VERSION     XM_071829950.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1540
                     /gene="LOC139839792"
                     /note="7-dehydrocholesterol reductase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139839792"
     CDS             64..1392
                     /gene="LOC139839792"
                     /codon_start=1
                     /product="7-dehydrocholesterol reductase-like"
                     /protein_id="XP_071686051.1"
                     /db_xref="GeneID:139839792"
                     /translation="MVTSDSESIKKKEMVHSPILTYFSVITLLSTCPPFVILLWYTMV
                     HQEGSILNTFSYLMENGVEGFVNIWPKPTAIAWKIIACYALFEASLQLWLPGKRVEGP
                     ISPTGNKPVYKANGVLAYVVTLVTYIGLWWFGIFNPTVVYDHLGEIYSALIFGSLIFC
                     VFLYIKGHLAPSSSDSGSSGNIIFDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVL
                     AVTYCIKQYETNGKLSDSMLVNTVLMLVYITKFFWWEAGYWNTMDIAHDRAGFYICWG
                     CLVWVPSIYTSPGMYLVNHPINLGPQLAISILVAGILCIYINYDCDRQRQEFRRTNGK
                     CLVWGKAPSKIVASYTTTKGETKSSLLLTSGWWGLSRHFHYVPEIMAAFFWTVPALFN
                     DFLPYFYFVFLTILLFDRAKRDDDRCRSKYGKYWKTYCNKVPYRIIPGIY"
     misc_feature    277..1389
                     /gene="LOC139839792"
                     /note="Isoprenylcysteine carboxyl methyltransferase (ICMT)
                     family; Region: ICMT; cl21511"
                     /db_xref="CDD:473892"
     polyA_site      1540
                     /gene="LOC139839792"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tagtcttcct catctctctc agatacacac actcgcactt ttgtaatctg caaatctgta
       61 aaaatggtga cgtcagattc agaatcgatt aagaagaagg aaatggttca ttctccgatt
      121 cttacttatt tctccgtcat cactcttctt tccacttgcc cccctttcgt tattctccta
      181 tggtacacaa tggtacatca ggaaggttct atattaaata catttagtta tttgatggag
      241 aatggggttg agggatttgt gaacatatgg cctaaaccga ctgctattgc atggaagatt
      301 attgcttgtt atgctctttt tgaagcttca cttcagcttt ggttacctgg gaaaagagtc
      361 gaagggccaa tatctcctac cggcaataag cctgtttata aggctaatgg tgtgttagca
      421 tatgtggtga cgctggttac atatattggt ctttggtggt ttggaatatt taacccaaca
      481 gttgtgtatg atcacctggg agaaatatac tctgcgctta tatttggaag ccttattttt
      541 tgtgtattct tatacatcaa gggtcatctg gcaccttctt cctctgattc tggttcatca
      601 ggaaacataa tatttgattt ctattggggc atggaactgt atcctcggat tggcaaaaac
      661 ttcgatatca aagtttttac aaactgcaga tttgggatga tgtcttgggc tgttcttgct
      721 gtcacctact gtataaagca gtacgagaca aatgggaaat tgtcagattc tatgttagta
      781 aacactgtgt tgatgttggt ttacattaca aaattctttt ggtgggaagc tggatactgg
      841 aacacaatgg atattgccca cgatcgagct ggattttata tctgctgggg atgcttggtt
      901 tgggttcctt ctatatatac ttcccctggc atgtaccttg tcaaccatcc tattaatctt
      961 ggacctcagc tcgcaatttc catcctagta gcaggcattc tatgtatata cattaattat
     1021 gactgtgatc gccaaagaca agaattccgt agaacaaatg gcaagtgttt ggtttggggg
     1081 aaagctccaa gcaagattgt ggcctcatac actacaacca aaggggagac aaagagcagc
     1141 cttctcctta cttcaggatg gtggggtctt tctcgacatt tccactacgt acctgaaatt
     1201 atggcagcat ttttttggac agtacctgct cttttcaatg actttctacc atacttctat
     1261 ttcgtgttcc tcactatctt actgttcgat cgagctaaaa gagacgatga tagatgccgt
     1321 tcaaagtatg gaaaatattg gaagacatac tgcaacaagg ttccatatag gatcatacca
     1381 gggatttact gagatggagt tggtgctttt tggcatgtat ttgtatctgt atgacttcag
     1441 ataatctatc tattgggttg tttaattcaa caatgtataa ttaaatgaaa taattaggtt
     1501 tgattttatg ttggtatctg atcatattta ttagtgcttc
//
LOCUS       XM_071829951            2397 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative E3
            ubiquitin-protein ligase XBAT35 (LOC139839793), mRNA.
ACCESSION   XM_071829951
VERSION     XM_071829951.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2397
                     /gene="LOC139839793"
                     /note="putative E3 ubiquitin-protein ligase XBAT35;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139839793"
     CDS             212..1654
                     /gene="LOC139839793"
                     /codon_start=1
                     /product="putative E3 ubiquitin-protein ligase XBAT35"
                     /protein_id="XP_071686052.1"
                     /db_xref="GeneID:139839793"
                     /translation="MGLQQSKDELLYQQVSYGTTEGIRKLHSEGAGLEWMDKEGKTPL
                     MLASMNPQLYDVAKTLIELGANVNAYRPGRHAGTPLHLAAKRGLEPMVKLLLSHGANA
                     LVMNDDCQTALDVARMKGYPNVVRAIENHICLFSGWLHELYGPGFLDLFAPQLLSRKV
                     WVVIIPCGARRITMPIKLELAIYSGLQDAKPRSFIALWKANLDDTNINQPDPTVVITT
                     SNIPRRWRRKRSISYSKIRQSRIKLAPVNANEKQQLERFCNACKGIPQVAHPAYPFNN
                     QGSNVGPPVQTATEDPALAQAITASLQYGSVPGPTGPDTYTGSGSTNPASENSDHNKK
                     SKCEINDAGTSSTSTPISYHPHTDSNTYTQIVPTAPINHVAPSLIPSAPPMPDMEYDG
                     PINYPSIDSAPIDLSETITNAESTGEKEKTNSDSSSCVICLDAPVEGACIPCGHMAGC
                     MSCLNEIKGKNWGCPVCRTKIDQVVRLYAV"
     misc_feature    <239..>604
                     /gene="LOC139839793"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    order(257..265,269..274,284..286,293..295,320..322,
                     326..328,332..334,344..349,356..364,368..370,374..376,
                     386..388,395..397,428..430,434..436,440..442,452..457,
                     464..472,476..481,491..493,500..502)
                     /gene="LOC139839793"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    326..430
                     /gene="LOC139839793"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    434..511
                     /gene="LOC139839793"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1484..1645
                     /gene="LOC139839793"
                     /note="RING finger, HC subclass, found in Arabidopsis
                     thaliana protein XB3 homolog 5 (XBAT35) and similar
                     proteins; Region: RING-HC_XBAT35-like; cd23129"
                     /db_xref="CDD:438491"
     polyA_site      2397
                     /gene="LOC139839793"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttctcgagga agataacgcc atttctttcc atatgcatat atcttacaaa taaatacata
       61 catacataca tacatacaat ttatcgccaa tcgtcactaa taataattaa tttaaggaat
      121 attcataatt caattcatct cgtcggtgga tcgctgttaa attcaaccct acaaaacaca
      181 aaaccctaat atcatcaatt aaaataatca aatgggttta cagcaatcca aagacgagct
      241 tttgtatcaa caagtcagtt atggcaccac tgaaggtatc agaaaacttc acagcgaagg
      301 tgctggcctt gagtggatgg ataaggaagg aaagacacca ttgatgttag cttccatgaa
      361 tccgcagctt tacgatgttg cgaaaacgtt gatcgaatta ggtgctaatg ttaacgctta
      421 tcgtccaggg cgtcatgctg gaactccttt gcatctagct gccaaaagag gcttagaacc
      481 gatggttaag ctactcttgt cacatggcgc taatgcattg gttatgaatg atgactgtca
      541 aactgcactt gatgttgcaa gaatgaaagg gtatcccaat gttgtccgtg caattgagaa
      601 ccatatctgc ttattctcgg gttggctgca tgagctttat gggccaggct ttcttgatct
      661 ttttgctcct cagctacttt ctagaaaagt gtgggtagtt ataataccat gtggagctcg
      721 tagaattaca atgcctatca agctggaact tgctatatat tctggtttac aggatgctaa
      781 acctcgctcg tttattgcac tgtggaaggc taacttggat gacacaaaca ttaaccagcc
      841 tgatcctaca gttgtcataa ctacttccaa catcccaaga cgctggagac ggaagcgatc
      901 tatttcgtac tctaaaatta ggcagtcacg tatcaaactt gcgccagtta acgcaaatga
      961 aaagcagcaa ttggagcggt tttgcaatgc ttgcaaagga attcctcagg tggcacatcc
     1021 tgcatatcca ttcaacaacc aaggctctaa tgttggacca cctgtccaaa cagcaaccga
     1081 ggaccctgcg ttagctcagg ctattactgc ttccctccaa tatggatcag taccgggacc
     1141 cacgggtcct gacacctata ccggttctgg ctcaaccaac cctgcttctg aaaacagtga
     1201 ccataataaa aagagcaaat gtgaaattaa tgatgcagga acaagtagca ccagcacccc
     1261 gattagttat catcctcaca cagatagcaa cacctatacc caaattgtcc caacagcacc
     1321 tattaaccac gttgcaccat ccttaattcc ctcggcgcca ccgatgccag atatggaata
     1381 tgacggtccc attaactacc cgtctattga ttctgcacca atcgatctgt ccgagactat
     1441 aactaatgcc gagtcaacag gtgaaaagga gaaaactaac agtgattctt catcatgcgt
     1501 catatgtctc gatgcacctg ttgagggagc ttgtatcccg tgtggtcaca tggctggatg
     1561 catgtcctgt ttgaacgaaa taaaaggaaa gaattggggt tgccctgttt gccgaaccaa
     1621 gattgatcaa gttgtgcggc tttatgctgt atagggttca tgctggatag cagtttcttg
     1681 tatactggca gtaagttctc ttctcgatac aatcaaaagt tcaagttcat atgttcggct
     1741 catggtttca gtcagaggtg gcaaatagga gggttggtta atggttaaat aaatagtttt
     1801 ctagtacaac acacgtatga tctatacata ttattaaacc taaatctgta atgaagtaaa
     1861 aaacactttg ggaaactttt tttttttttt ttgatagtta atgttcatgt tcattctagt
     1921 aatttgaccg gttaggatag aacataacac taggtgataa ataaattagt ttgaaatata
     1981 gccacctctg ttaaatgtaa agcaaactaa actcaatcta agttatttaa ccatccatat
     2041 cgaatgtaaa tagataaata gttcctagta ctaggtttcc gaaaggctat ttggtatatt
     2101 gaaatagtat tctgattttg tttcttgttg gtgatgcagt atctatatat atatatcttg
     2161 aggacttgtg aaaataataa tctttgccag ctacgggaga agtggaagct gattatcaaa
     2221 gttgtgacaa ctttaacaac ttccatgtta tctttccaat ctgagatttg ctatgtggta
     2281 tgtgctaaat tgtttcgagt atatcctaaa atgataaaac aagtatatat ttgtaaattt
     2341 tgtatgtgga tatgacttta atatcatata atttaatata ataattgtta tatgtta
//
LOCUS       XM_071829952            1141 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides stem-specific protein TSJT1
            (LOC139839794), mRNA.
ACCESSION   XM_071829952
VERSION     XM_071829952.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1141
                     /gene="LOC139839794"
                     /note="stem-specific protein TSJT1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839794"
     CDS             89..799
                     /gene="LOC139839794"
                     /codon_start=1
                     /product="stem-specific protein TSJT1"
                     /protein_id="XP_071686053.1"
                     /db_xref="GeneID:139839794"
                     /translation="MLGVFSSSIVSPPEELVAAGSRTPSPKISSKSLVNRFIGSNESV
                     VSMQIGDDVQLAYTHQNESITHPRSFAVKDEIFCLFEGALDNLGSLKQQYGLSKSANE
                     VVLVIEAYKALRDRAPYPINQVVGHLIGSFSFVVFDKSTSTLFVATDQHGKVPLYWGI
                     TADGCVAFANDADLLKSACGKSLASFPQGCFYSTAIGELRCYENPKNKITAVPATEEE
                     IWGAKFMVEGPSVISATQ"
     misc_feature    92..766
                     /gene="LOC139839794"
                     /note="Glutamine amidotransferases class-II (GATase). The
                     glutaminase domain catalyzes an amide nitrogen transfer
                     from glutamine to the appropriate substrate. In this
                     process, glutamine is hydrolyzed to glutamic acid and
                     ammonia. This domain is related to...; Region: Gn_AT_II;
                     cl00319"
                     /db_xref="CDD:469719"
     misc_feature    order(92..94,269..271,329..337,404..406)
                     /gene="LOC139839794"
                     /note="active site"
                     /db_xref="CDD:238212"
     polyA_site      1141
                     /gene="LOC139839794"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actctcatgt tttcagttat aggtttcaat tttacaaaat aaaataaaac agaaaataaa
       61 taactttaaa tagttataat aattcaatat gttaggtgta tttagcagtt caatagtttc
      121 accgccggag gagctggtgg cagccggaag ccgtacaccg tcgccgaaga tatcgtccaa
      181 atcgctcgtt aatcggttca tcggaagtaa tgaatcggtg gtatcgatgc agatcggtga
      241 tgatgttcaa ttggcgtaca ctcatcagaa cgaatcaatt acacatccga gatcttttgc
      301 ggtcaaagac gagatatttt gcttgttcga aggagcactt gacaacttgg gtagcctaaa
      361 gcaacagtat gggctttcca agtcggctaa cgaagtcgtt ttggtcattg aagcttacaa
      421 ggctcttcga gatcgagccc cgtatccaat aaaccaagtt gtgggccacc ttattggaag
      481 tttttcattt gttgtctttg acaagtcaac ctctacttta tttgtggcca cagatcaaca
      541 tggcaaggtt cctttgtatt ggggaatcac agccgatggg tgcgttgcat ttgccaatga
      601 tgctgatttg ctcaaaagtg cctgtggcaa gtcacttgct tcgttccctc aaggatgttt
      661 ctactccaca gcaattggag agctcagatg ctacgagaat ccgaagaaca aaatcacagc
      721 cgtccctgca actgaggagg agatttgggg tgcaaagttc atggtggaag gcccatcagt
      781 tatctcagcc acacagtaag cacatctctt tcatcccatc cctccatgga ctattgcttc
      841 atccacaact ttttatccgg ttatcacttt taatatgacg gcatgcgagg atcccatctt
      901 actgaatcaa cgtctttagt aggatgatat gtagatgttt gggctgttta gggaccgagg
      961 ctgtagtttt tttcatttgt atgttgttct gtgtacagag acacgccttg tgtaataaag
     1021 tctgggtaga catgaatgta agatgtatgg ttgtgatcta tatgttttat atgtatatat
     1081 gtggtggtgg ttgtccttgc aaactaggaa atgaaattta agtatgcttt gaagtttgaa
     1141 a
//
LOCUS       XM_071829954            1602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides low affinity inorganic
            phosphate transporter 1-like (LOC139839795), mRNA.
ACCESSION   XM_071829954
VERSION     XM_071829954.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139839795"
                     /note="low affinity inorganic phosphate transporter
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 69 Proteins"
                     /db_xref="GeneID:139839795"
     CDS             1..1602
                     /gene="LOC139839795"
                     /codon_start=1
                     /product="low affinity inorganic phosphate transporter
                     1-like"
                     /protein_id="XP_071686055.1"
                     /db_xref="GeneID:139839795"
                     /translation="MAREQLQVLSALDAAKTQFYHFTAIVIAGMGFFTDAYDLFAISL
                     VTKLLGRIYYFDNNAKVLKPGTLPPSVASSVTGVALVGTLCGQLFFGWLGDKMGRKRV
                     YGMTLALMVVCSLASGLSFSHERRGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANK
                     KTRGAFIAAVFAMQGFGILTSGVVALITAASFDHAFKAPPFKTNPIGSTVPQADYVWR
                     IILMFGAIPAALTYYWRMKMPETARYTALVAKNAKQAAVDMGRVLNVEIAAEEEKLEQ
                     IESHNQFGLFSKEFLRRHGLHLLGTCSTWFLLDIAFYSQNLFQKDVFSAIGWIPKAGE
                     MNAIGEVLKVAKAQTLIALCSTVPGYWFTVAFIDIIGRFAIQLMGFFFMTVFMFALAI
                     PYRHWTLHDNRLGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGK
                     AGAIVGAYGFLYASQSRDPNNTDAGYHTGIGIRYSLITLGVVNFLGMAFTFLVPEAKG
                     KSLEEMSGENEEEMEPTPNKRTSPV"
     misc_feature    31..1533
                     /gene="LOC139839795"
                     /note="phosphate:H+ symporter; Region: 2A0109; TIGR00887"
                     /db_xref="CDD:129965"
ORIGIN      
        1 atggctcgag agcaactgca agtgcttagc gcacttgatg ctgctaagac ccaattttac
       61 cattttacgg ctatcgtgat tgcgggtatg ggtttcttca cagacgccta cgatctcttc
      121 gctatttccc ttgtaaccaa gttacttgga cgtatttact acttcgacaa caatgcaaag
      181 gtactcaagc ctggaaccct accccctagt gtagcctcat cggttacagg tgtcgccctt
      241 gttggaacgc tatgcggtca actcttcttc gggtggcttg gagacaaaat gggacgaaaa
      301 agagtctatg gtatgacttt ggctctcatg gtcgtgtgct cactcgcatc gggcctttca
      361 ttctcacatg aacgaagggg tgtgatggct actctttgtt tttttaggtt ttggctcggg
      421 tttggtattg gtggtgacta tccactttcg gctacaatta tgtcggaata cgcaaataag
      481 aaaactcgtg gtgcatttat tgctgcggtt ttcgctatgc aaggtttcgg aattttgacc
      541 agtggagtgg tagcattgat cacggctgca tcttttgacc acgcgtttaa agctcccccc
      601 tttaaaacaa atccaatagg gtccacagtt cctcaagctg actatgtctg gagaattatt
      661 ctcatgtttg gggcgattcc ggccgccctg acatactatt ggcgtatgaa gatgccagaa
      721 accgctcgtt atacagcttt ggtagcgaag aacgccaaac aggcagcagt agacatgggt
      781 cgagtcttaa atgttgagat agccgccgaa gaggaaaagt tagagcaaat tgagtcgcat
      841 aaccaattcg gattgttttc taaagaattt cttcgtcgtc acgggcttca tttactcgga
      901 acatgttcca catggttttt actcgatatc gctttctact cacaaaacct attccaaaag
      961 gatgtattct ccgcaattgg atggatccct aaagcgggtg aaatgaatgc catcggcgag
     1021 gttttgaaag tagcaaaagc ccaaactctg attgcgcttt gcagtactgt cccgggatat
     1081 tggttcacag ttgccttcat tgatatcatt ggtcgtttcg caatccaact catgggattc
     1141 tttttcatga ctgttttcat gttcgcccta gctattccat accgccactg gaccttacac
     1201 gacaatcgtc ttggcttcgt gatcatgtac tccttaacct tcttttttgc taactttggc
     1261 cctaacgcca caaccttcgt ggtccctgct gaaatcttcc cagccagact ccgatccact
     1321 tgtcatggaa tctccgcagc ttctgggaaa gcgggagcca ttgtcggtgc atacgggttc
     1381 ctctacgctt ctcaaagccg cgacccaaat aataccgatg cagggtacca tacaggtatc
     1441 ggaatcaggt actcgcttat cacactcggt gtagtcaatt tcttaggaat ggcgtttaca
     1501 tttttagtcc ccgaagctaa aggcaaatcg cttgaagaaa tgtccggtga aaatgaagag
     1561 gaaatggagc caacccccaa caaacgaacc tcacctgttt ga
//
LOCUS       XM_071829955            1722 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamine synthetase,
            chloroplastic (LOC139839796), mRNA.
ACCESSION   XM_071829955
VERSION     XM_071829955.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1722
                     /gene="LOC139839796"
                     /note="glutamine synthetase, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 78 Proteins"
                     /db_xref="GeneID:139839796"
     CDS             160..1452
                     /gene="LOC139839796"
                     /codon_start=1
                     /product="glutamine synthetase, chloroplastic"
                     /protein_id="XP_071686056.1"
                     /db_xref="GeneID:139839796"
                     /translation="MAQCLAPSVQWQMRLTKNAMDTSCMSSKMLNSLSLKQSKKGSLK
                     TATKFRICASASGTINRMEDLLNLDVTPYTNKIIAEYIWIGGSGTDVRSKSRTLSKPV
                     EHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPQGVPI
                     PTNKRAKAAEIFSNPKVEALVPWFGIEQEYTLLQPDVKWPLGWPVGGYPGPQGPYYCG
                     AGADKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCAR
                     YLLERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTLPMREDGGFEVIKKAILNLSLR
                     HTEHISAYGEGNERRLTGKHETASINQFSWGVANRGCSIRVGRDTEKEGKGYLEDRRP
                     ASNMDPYTVTGLLAETTILWEPTLEAEALAAQKLALKV"
     misc_feature    160..1449
                     /gene="LOC139839796"
                     /note="glutamine synthetase; Provisional; Region:
                     PLN03036"
                     /db_xref="CDD:178603"
     polyA_site      1722
                     /gene="LOC139839796"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catccgcatt tctttatcca taatttttta tttatttatt gctttttctc aatttcttat
       61 ttatttacat ccatttaaca acttccattc cccccttcct cttcccctgt accgccacaa
      121 ccactttccg gctgcttttc ccttcgtttt ccggcgaaaa tggcgcaatg tttggctcct
      181 tcagtgcaat ggcagatgag gttaacaaag aatgcaatgg atacaagctg tatgtcatct
      241 aaaatgttga actctttgtc tttgaaacaa agcaaaaaag gatcactcaa aactgcaaca
      301 aaatttagga tttgtgcttc tgcaagtggg accattaaca ggatggaaga cctgctcaac
      361 ttggatgtaa ctccttacac caataaaatc atcgctgaat acatctggat tggtggttct
      421 gggacagatg tgaggagcaa atcaagaaca ctatcaaaac cagttgagca tccttctgag
      481 cttccaaagt ggaattacga cggatcaagt accggacaag caccgggaga agatagtgaa
      541 gttatcttat acccccaggc gattttcaag gatcctttcc gtggtggcaa caacatcttg
      601 gtgatctgtg atgcatacac accacaaggt gtgcctatcc ctaccaacaa acgggccaag
      661 gctgccgaga ttttcagcaa ccctaaggtt gaagctcttg tgccatggtt tggaattgag
      721 caagagtaca ctttgcttca gccagatgtg aagtggcctt tgggttggcc agttggaggt
      781 taccctggtc ctcaggggcc atactactgt ggtgctggag cagataagtc gtttggaaga
      841 gacatatccg atgcacatta caaggcttgt ttatatgctg gaattaacat cagtggaacc
      901 aatggagaag ttatgcccgg acagtgggaa tttcaagttg gtccaagtgt cggaatcgaa
      961 gctggagacc atatctggtg tgctagatac cttcttgagc gaattactga acaagctggt
     1021 gttgtcttga cgcttgaccc taagcccatt gagggagact ggaatggagc aggatgccac
     1081 accaactaca gtacattacc catgagagaa gatggtggct ttgaggtaat taaaaaggcg
     1141 attctgaacc tttcacttcg ccacactgag cacatcagtg cttatggaga aggaaatgag
     1201 agaagattga caggcaaaca cgaaactgcc agcatcaacc aattctcatg gggagtagct
     1261 aatcgtggtt gctcgattcg tgtgggtcgc gatactgaga aggaaggcaa aggttacttg
     1321 gaagataggc gtccagcatc aaacatggac ccatacacgg tgaccggatt acttgctgaa
     1381 actacaatct tgtgggagcc tactcttgaa gctgaagcac ttgctgccca aaagttggcg
     1441 ttgaaagtgt aggctttatc aatcaaggcg ataagtcgaa gaagcattaa cacgcacaat
     1501 cattcacgtt ctttgaaaac tcgcttttct gtttttctag ttgatttctt caagatcttg
     1561 ttgtaaataa aggtcgtcac tttcaaagct tttttaagca aatgggtgtt tttcacacga
     1621 ttagtggaca atgtatgcac atattgatgt gtgcataagt ggacttggcc ctttctgagc
     1681 aggctttatt ttctcttgtt gaattgaatt cactatcata ta
//
LOCUS       XM_071829956             816 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kirola-like (LOC139839797),
            mRNA.
ACCESSION   XM_071829956
VERSION     XM_071829956.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..816
                     /gene="LOC139839797"
                     /note="kirola-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139839797"
     CDS             65..520
                     /gene="LOC139839797"
                     /codon_start=1
                     /product="kirola-like"
                     /protein_id="XP_071686057.1"
                     /db_xref="GeneID:139839797"
                     /translation="MAQTGTLTKQITIKSDGDVFHEIFRYRPHHIADMSPEYIKGVDL
                     HDGHEWGTVGSIITWNFFHDGKAKVAKEKIEAIDEAKKSVCFKVIGGDILEDYKNFLI
                     TVHVDTHGEENVVTWTFHYEKLNESVPNPDSLMDFVLSVTKDIEAHHLK"
     misc_feature    68..517
                     /gene="LOC139839797"
                     /note="Pathogenesis-related protein Bet v I family;
                     Region: Bet_v_1; smart01037"
                     /db_xref="CDD:198105"
     misc_feature    order(83..85,95..97,134..139,146..148,158..160,179..181,
                     239..241,245..250,263..265,272..274,278..280,314..316,
                     320..322,326..328,338..343,362..364,368..370,374..376,
                     407..409,413..415,419..421,425..427,461..466,470..475,
                     482..487,491..499)
                     /gene="LOC139839797"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     misc_feature    order(203..205,212..235)
                     /gene="LOC139839797"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
ORIGIN      
        1 ccatctccaa atatacttgc agtctttcag ttagttcata aaacaaagag atcatattaa
       61 tttgatggct caaactggaa ccctaactaa gcaaataacc atcaagtcag atggagatgt
      121 gtttcatgaa atatttcgat atcggccaca tcacatcgca gatatgagcc ctgagtacat
      181 aaaaggtgtt gatctgcacg atggtcatga atggggtact gttggatcaa tcatcacctg
      241 gaactttttt catgatggga aggcaaaagt ggcaaaagaa aaaatcgagg caatcgatga
      301 ggcgaaaaag tcggtgtgct tcaaggtaat tgggggcgac atattggagg attacaagaa
      361 ttttctgata actgttcatg ttgacacaca tggagaagag aacgtcgtta cgtggacttt
      421 tcattacgag aagctcaatg agagtgttcc aaatccagac agtttgatgg atttcgttct
      481 tagtgtcact aaagatatcg aggcccatca cctcaaataa tagttcgact taaatcggtc
      541 tcgtatgcca agaataagaa tctatggttt gttggtgttt gtttgcaatc taattagttg
      601 tttacatatg atgtacgttg ttgtcctagt gttatactac agaataagct ttacatcttg
      661 gatgtaaatt gtatttcata agataataaa tgtgtttgtt gttatgtaat agtgagttag
      721 tggtattata tgctatctgt gatataatgg agtgatcgac tgatcgtgag agatgcaaaa
      781 gtattaagtt acaatgagac aatgtatttg taactt
//
LOCUS       XM_071829957             610 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kirola-like (LOC139839798),
            mRNA.
ACCESSION   XM_071829957
VERSION     XM_071829957.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..610
                     /gene="LOC139839798"
                     /note="kirola-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139839798"
     CDS             29..484
                     /gene="LOC139839798"
                     /codon_start=1
                     /product="kirola-like"
                     /protein_id="XP_071686058.1"
                     /db_xref="GeneID:139839798"
                     /translation="MAQTGTLTKQITIKSDGDVFHEIFRYRPHHIADMSPEYIKGVDL
                     HDGHEWGTVGSIITWNYFHDGKPKEAKEKIEAIDEAKKSVCFKVIGGDILEAYKNFMI
                     TVHVDTHGEENVVTWTFHYEKLNESVPDPNSLMDFVLSVTKDIETHHLK"
     misc_feature    32..481
                     /gene="LOC139839798"
                     /note="Pathogenesis-related protein Bet v I family;
                     Region: Bet_v_1; smart01037"
                     /db_xref="CDD:198105"
     misc_feature    order(47..49,59..61,98..103,110..112,122..124,143..145,
                     203..205,209..214,227..229,236..238,242..244,278..280,
                     284..286,290..292,302..307,326..328,332..334,338..340,
                     371..373,377..379,383..385,389..391,425..430,434..439,
                     446..451,455..463)
                     /gene="LOC139839798"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     misc_feature    order(167..169,176..199)
                     /gene="LOC139839798"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
ORIGIN      
        1 cataacacaa agagatcatt tttatttgat ggctcaaact ggaaccctaa ctaagcaaat
       61 aaccatcaag tcagatggag atgtgtttca tgaaatattt cgatatcggc cacatcacat
      121 cgcagatatg agccctgagt acataaaagg tgttgatctg cacgatggtc atgaatgggg
      181 tactgttgga tcaatcatca cctggaacta ttttcatgat gggaagccaa aagaggcaaa
      241 agaaaaaatc gaggcaatcg atgaggcgaa aaagtcggtg tgcttcaagg taattggggg
      301 cgacatattg gaggcttaca agaattttat gataactgtt catgttgaca cacacggaga
      361 agagaacgtc gttacgtgga cttttcatta cgagaagctc aatgagagtg ttccggatcc
      421 aaacagtttg atggatttcg ttcttagtgt cactaaagat atcgagaccc atcacctcaa
      481 ataatagttc gacttaaatc ggtcacgtat gccaagaata agaatcgttg gtttgctggt
      541 gtttgtttgc aatctaattc gttgtttaca tatgatgtac gttgttgtcc tagtgttata
      601 ctacatcaaa
//
LOCUS       XM_071829958            2340 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839799), transcript variant X1, mRNA.
ACCESSION   XM_071829958
VERSION     XM_071829958.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2340
                     /gene="LOC139839799"
                     /note="uncharacterized LOC139839799; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 46
                     Proteins"
                     /db_xref="GeneID:139839799"
     CDS             150..1703
                     /gene="LOC139839799"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686059.1"
                     /db_xref="GeneID:139839799"
                     /translation="MEEAVKGADDEIQGSRLTMEKVAAAKQFIENHYKTQMKNIQERK
                     ERRWILERKLASSDVPKEEQINLIKDLERKETEFMRLKRNKICVDDFELLTIIGRGAF
                     GEVRLCREKKSGNIYAMKKLKKSEMLVRGQVEHVRAERNLLAEVASHCIVKLYYSFQD
                     TEYLYLIMEYLPGGDMMTLLMREDTLKEDVAKFYIAQSVLAIESIHKHNYIHRDIKPD
                     NLLLDKNGHMKLSDFGLCKPLDCRTLSTLNENEATTDENIREPMDVDGIPDAENGHRW
                     KSAHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY
                     PPFYSDDPITTCRKIVHWRNHLRFPEDTMLSPEAKDLIYRLLCDVEHRLGTCGPDQIK
                     AHPWFNDVEWDKLYEMDAAFKPEVNDELDTQNFMKFDELNPPTSGRTGSGPSRKQQLN
                     PKDLNFVGYTYKNFDAVKALRDNPDLMRSASSDSLYAGELKMDYTTKATTEDSDIQMF
                     QSADDSMLP"
     misc_feature    222..407
                     /gene="LOC139839799"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; Region:
                     MobB_NDR_LATS-like; cd21742"
                     /db_xref="CDD:439267"
     misc_feature    order(222..227,231..239,243..248,255..260,267..269,
                     276..278,288..290,363..365,372..380,384..389,396..401)
                     /gene="LOC139839799"
                     /note="Mob binding site [polypeptide binding]; other site"
                     /db_xref="CDD:439267"
     misc_feature    414..1535
                     /gene="LOC139839799"
                     /note="Catalytic domain of Nuclear Dbf2-Related
                     kinase-like Protein Serine/Threonine Kinases; Region:
                     STKc_NDR_like; cd05599"
                     /db_xref="CDD:270750"
     misc_feature    order(438..452,462..464,501..503,507..509,603..605,
                     651..656,660..662,672..674,678..680,789..791,795..797,
                     801..806,810..812,840..845,852..854,1038..1055,1134..1136,
                     1152..1154,1161..1163)
                     /gene="LOC139839799"
                     /note="active site"
                     /db_xref="CDD:270750"
     misc_feature    order(438..452,462..464,501..503,507..509,603..605,
                     654..662,672..674,789..791,795..797,801..806,810..812,
                     840..845)
                     /gene="LOC139839799"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(450..452,672..674,678..680,789..791,795..797,
                     801..803,852..854,1038..1055,1134..1136,1152..1154,
                     1161..1163)
                     /gene="LOC139839799"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(840..872,984..989,1026..1055)
                     /gene="LOC139839799"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270750"
     misc_feature    1515..1532
                     /gene="LOC139839799"
                     /note="hydrophobic motif (HM); other site"
                     /db_xref="CDD:270750"
ORIGIN      
        1 atacacatac accacagttt acttaggtga cttgatgctg atgaggtaaa ccaaaaaggg
       61 gcttctcagg tttccacttt tgctcttatt ttcatataaa caaaaaacca aaaaaacaca
      121 ctcagattca ctgaaactac tgtgtgaaaa tggaagaggc tgtaaaaggg gctgatgatg
      181 aaattcaagg gtcaaggttg accatggaaa aagtggctgc tgctaagcaa tttatagaga
      241 atcattacaa aacccagatg aagaatattc aagaacgcaa agaaaggaga tggattttgg
      301 agagaaaatt ggcttcctcg gatgtgccta aagaggaaca gattaatttg atcaaggatt
      361 tagagagaaa ggaaacagag tttatgagac ttaaaaggaa caagatttgc gttgatgatt
      421 ttgaactttt gaccatcatt ggaagaggag cctttggcga ggttcgattg tgcagggaga
      481 aaaaatccgg caatatttat gcaatgaaaa aattgaagaa atcggaaatg cttgttagag
      541 gacaagtgga gcatgttagg gctgagagga acttacttgc agaagtggct agtcactgca
      601 ttgtaaagtt atattattcg tttcaagaca ctgaatattt gtacctgata atggaatatt
      661 tgcccggtgg ggacatgatg acgttactca tgagagaaga cactctaaaa gaagatgttg
      721 ctaagtttta tatagctcaa agtgttcttg ctatcgagtc cattcacaaa cataactaca
      781 ttcacagaga tataaaacct gacaaccttc ttcttgacaa aaatgggcac atgaagcttt
      841 cggattttgg cctctgcaaa cctcttgatt gtaggacttt atctacatta aacgaaaatg
      901 aagcaacaac tgatgagaat atacgagaac cgatggatgt tgacggtata cctgatgccg
      961 agaacggtca taggtggaag agtgcccatg aacagcttca acattggcag atgaacagga
     1021 gaaaattggc gttttcaact gtgggtacac cagactatat tgcccctgaa gtattgttga
     1081 agaaaggata tggaatggag tgtgactggt ggtctttagg tgcaataatg tatgagatgc
     1141 tagttggata tcctccattt tactcagatg atccaataac cacatgcagg aagattgttc
     1201 attggaggaa tcatctacga tttccagaag acacaatgtt gtccccagaa gcgaaagatc
     1261 tcatctacag gttgctttgt gatgtcgaac atcggttggg tacttgtgga ccagaccaaa
     1321 taaaggctca cccatggttt aatgacgttg agtgggataa actgtatgaa atggatgcgg
     1381 cgtttaaacc tgaagttaac gatgagctag acactcagaa ttttatgaag tttgatgagt
     1441 tgaatcctcc aacttcagga agaactggtt caggaccatc tcggaagcag cagttaaatc
     1501 caaaggactt gaattttgtg ggctatacat acaagaactt tgatgctgtt aaggcattgc
     1561 gtgataatcc cgatctcatg cgaagtgcat ccagtgattc cttatatgca ggtgaattga
     1621 agatggatta cactacaaaa gcaacaacag aagattccga catacaaatg ttccaatcag
     1681 ccgatgactc catgttgcca taattttata gctgcttcgg tgggattaaa agcataatta
     1741 acttgtgtat tataatcagg ttcttgccca taaatggcaa ctccccacag ctacccgccc
     1801 cctacatttg gcattaaaaa ataggctgcc cctttccatt aactcatttt accaaatcca
     1861 aaccaacaaa catgacttaa accgtattga ccttaaatct caaaaaagat ctgaggcggt
     1921 attgatgact cacattggtt gtcgttggat ttggtgtaag ggttgtattc aggaaaaggg
     1981 ggcggccgaa aagtaacatt atctaagtgt acagtagtgt ataaaagacc aagtgtaggg
     2041 tgatctttta tttatttata ctcgttgatt gctagggctg gggtactgct gtgtgttatg
     2101 gttgcccagg ttgacaagtc aaaaacttgc cttctcttgc ggcaatttct agaactttct
     2161 tgaaatttat tatgactata attattgtgt gtgagctttt agcaatatag gatgtttagt
     2221 agttactgtt aactgattgt ggtaattttg cattatacat ttgaatgact tcatattgtg
     2281 agattgggta ttattgtatt taaacgacta caagatgtaa gaatcttgtg gatgtgttga
//
LOCUS       XM_071829959            2337 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839799), transcript variant X2, mRNA.
ACCESSION   XM_071829959
VERSION     XM_071829959.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2337
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2337
                     /gene="LOC139839799"
                     /note="uncharacterized LOC139839799; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins"
                     /db_xref="GeneID:139839799"
     CDS             150..1700
                     /gene="LOC139839799"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686060.1"
                     /db_xref="GeneID:139839799"
                     /translation="MEEAVKGADDEIQGSRLTMEKVAAAKQFIENHYKTQMKNIQERK
                     ERRWILERKLASSDVPKEEQINLIKDLERKETEFMRLKRNKICVDDFELLTIIGRGAF
                     GEVRLCREKKSGNIYAMKKLKKSEMLVRGQVEHVRAERNLLAEVASHCIVKLYYSFQD
                     TEYLYLIMEYLPGGDMMTLLMREDTLKEDVAKFYIAQSVLAIESIHKHNYIHRDIKPD
                     NLLLDKNGHMKLSDFGLCKPLDCRTLSTLNENEATTDENIREPMDVDGIPDAENGHRW
                     KSAHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY
                     PPFYSDDPITTCRKIVHWRNHLRFPEDTMLSPEAKDLIYRLLCDVEHRLGTCGPDQIK
                     AHPWFNDVEWDKLYEMDAAFKPEVNDELDTQNFMKFDELNPPTSGRTGSGPSRKQLNP
                     KDLNFVGYTYKNFDAVKALRDNPDLMRSASSDSLYAGELKMDYTTKATTEDSDIQMFQ
                     SADDSMLP"
     misc_feature    222..407
                     /gene="LOC139839799"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; Region:
                     MobB_NDR_LATS-like; cd21742"
                     /db_xref="CDD:439267"
     misc_feature    order(222..227,231..239,243..248,255..260,267..269,
                     276..278,288..290,363..365,372..380,384..389,396..401)
                     /gene="LOC139839799"
                     /note="Mob binding site [polypeptide binding]; other site"
                     /db_xref="CDD:439267"
     misc_feature    414..1532
                     /gene="LOC139839799"
                     /note="Catalytic domain of Nuclear Dbf2-Related
                     kinase-like Protein Serine/Threonine Kinases; Region:
                     STKc_NDR_like; cd05599"
                     /db_xref="CDD:270750"
     misc_feature    order(438..452,462..464,501..503,507..509,603..605,
                     651..656,660..662,672..674,678..680,789..791,795..797,
                     801..806,810..812,840..845,852..854,1038..1055,1134..1136,
                     1152..1154,1161..1163)
                     /gene="LOC139839799"
                     /note="active site"
                     /db_xref="CDD:270750"
     misc_feature    order(438..452,462..464,501..503,507..509,603..605,
                     654..662,672..674,789..791,795..797,801..806,810..812,
                     840..845)
                     /gene="LOC139839799"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(450..452,672..674,678..680,789..791,795..797,
                     801..803,852..854,1038..1055,1134..1136,1152..1154,
                     1161..1163)
                     /gene="LOC139839799"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270750"
     misc_feature    order(840..872,984..989,1026..1055)
                     /gene="LOC139839799"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270750"
     misc_feature    1512..1529
                     /gene="LOC139839799"
                     /note="hydrophobic motif (HM); other site"
                     /db_xref="CDD:270750"
ORIGIN      
        1 atacacatac accacagttt acttaggtga cttgatgctg atgaggtaaa ccaaaaaggg
       61 gcttctcagg tttccacttt tgctcttatt ttcatataaa caaaaaacca aaaaaacaca
      121 ctcagattca ctgaaactac tgtgtgaaaa tggaagaggc tgtaaaaggg gctgatgatg
      181 aaattcaagg gtcaaggttg accatggaaa aagtggctgc tgctaagcaa tttatagaga
      241 atcattacaa aacccagatg aagaatattc aagaacgcaa agaaaggaga tggattttgg
      301 agagaaaatt ggcttcctcg gatgtgccta aagaggaaca gattaatttg atcaaggatt
      361 tagagagaaa ggaaacagag tttatgagac ttaaaaggaa caagatttgc gttgatgatt
      421 ttgaactttt gaccatcatt ggaagaggag cctttggcga ggttcgattg tgcagggaga
      481 aaaaatccgg caatatttat gcaatgaaaa aattgaagaa atcggaaatg cttgttagag
      541 gacaagtgga gcatgttagg gctgagagga acttacttgc agaagtggct agtcactgca
      601 ttgtaaagtt atattattcg tttcaagaca ctgaatattt gtacctgata atggaatatt
      661 tgcccggtgg ggacatgatg acgttactca tgagagaaga cactctaaaa gaagatgttg
      721 ctaagtttta tatagctcaa agtgttcttg ctatcgagtc cattcacaaa cataactaca
      781 ttcacagaga tataaaacct gacaaccttc ttcttgacaa aaatgggcac atgaagcttt
      841 cggattttgg cctctgcaaa cctcttgatt gtaggacttt atctacatta aacgaaaatg
      901 aagcaacaac tgatgagaat atacgagaac cgatggatgt tgacggtata cctgatgccg
      961 agaacggtca taggtggaag agtgcccatg aacagcttca acattggcag atgaacagga
     1021 gaaaattggc gttttcaact gtgggtacac cagactatat tgcccctgaa gtattgttga
     1081 agaaaggata tggaatggag tgtgactggt ggtctttagg tgcaataatg tatgagatgc
     1141 tagttggata tcctccattt tactcagatg atccaataac cacatgcagg aagattgttc
     1201 attggaggaa tcatctacga tttccagaag acacaatgtt gtccccagaa gcgaaagatc
     1261 tcatctacag gttgctttgt gatgtcgaac atcggttggg tacttgtgga ccagaccaaa
     1321 taaaggctca cccatggttt aatgacgttg agtgggataa actgtatgaa atggatgcgg
     1381 cgtttaaacc tgaagttaac gatgagctag acactcagaa ttttatgaag tttgatgagt
     1441 tgaatcctcc aacttcagga agaactggtt caggaccatc tcggaagcag ttaaatccaa
     1501 aggacttgaa ttttgtgggc tatacataca agaactttga tgctgttaag gcattgcgtg
     1561 ataatcccga tctcatgcga agtgcatcca gtgattcctt atatgcaggt gaattgaaga
     1621 tggattacac tacaaaagca acaacagaag attccgacat acaaatgttc caatcagccg
     1681 atgactccat gttgccataa ttttatagct gcttcggtgg gattaaaagc ataattaact
     1741 tgtgtattat aatcaggttc ttgcccataa atggcaactc cccacagcta cccgccccct
     1801 acatttggca ttaaaaaata ggctgcccct ttccattaac tcattttacc aaatccaaac
     1861 caacaaacat gacttaaacc gtattgacct taaatctcaa aaaagatctg aggcggtatt
     1921 gatgactcac attggttgtc gttggatttg gtgtaagggt tgtattcagg aaaagggggc
     1981 ggccgaaaag taacattatc taagtgtaca gtagtgtata aaagaccaag tgtagggtga
     2041 tcttttattt atttatactc gttgattgct agggctgggg tactgctgtg tgttatggtt
     2101 gcccaggttg acaagtcaaa aacttgcctt ctcttgcggc aatttctaga actttcttga
     2161 aatttattat gactataatt attgtgtgtg agcttttagc aatataggat gtttagtagt
     2221 tactgttaac tgattgtggt aattttgcat tatacatttg aatgacttca tattgtgaga
     2281 ttgggtatta ttgtatttaa acgactacaa gatgtaagaa tcttgtggat gtgttga
//
LOCUS       XM_071829960            1755 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839800), transcript variant X1, mRNA.
ACCESSION   XM_071829960
VERSION     XM_071829960.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1755
                     /gene="LOC139839800"
                     /note="uncharacterized LOC139839800; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839800"
     CDS             117..1424
                     /gene="LOC139839800"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686061.1"
                     /db_xref="GeneID:139839800"
                     /translation="MSGRHEPIPKASSRGSDYYPTYKGIDHCTCAPHSRHYGRPPYCP
                     KANPRVKASASRPSYTSYLSSDVPTLSRNYLSSSSDYLHKDILTSRSGPYGVDDITGI
                     GVRNDTVLGGYTAGTSGNGYRSSFEDPYLLGRRDVMRDMGAGVRDIVDERPDSLRKAN
                     GVSPGSQKSNVLFVDALPPDCTRREVSHLFRPFVGFKEIRLVHKEPRNIGDKTIVLCF
                     VEFSDSNHALSALEALQGYKFDNKKPDSAALQIHFAHFPFKLPPDKEELGFAHFQSQP
                     QRVNEEQDLAANQQSLQLPPNRDERGLLGRYPSQQPSHKDERDRAIPREREMAVEDEE
                     PQSVKRKFEGSNGSLKKKGKVEGSGSKSKKSCAKCKRKHSGECFVKSGACFRCGKTDH
                     VLKDCPVKESVKSCYVCGEEGHVRAQCPKKTGAPKPNKKDKAS"
     misc_feature    621..878
                     /gene="LOC139839800"
                     /note="RNA recognition motif (RRM) found in Arabidopsis
                     thaliana nuclear speckle RNA-binding protein A (AtNSRA)
                     and similar protein; Region: RRM_AtNSRA_like; cd21618"
                     /db_xref="CDD:410197"
     misc_feature    <1260..1382
                     /gene="LOC139839800"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 ttctctaaaa aaaagtgtag attggctggg acacctcaac cctgtgttgc ctttggcaac
       61 ccaccaaacc caccccgcaa gggtcggatg cctgtaaacc ctccactgag tctcccatga
      121 gcggcaggca cgagcctatc ccgaaggcat cctccagagg ctcggactat tacccaacgt
      181 acaaggggat cgatcactgc acatgtgcac cgcacagcag gcactatggc aggccgccct
      241 actgcccgaa ggcaaaccca agagtcaaag ctagtgcttc aagaccatcc tatactagtt
      301 atctatcgtc tgatgtacca acgttgtctc gaaattactt gagcagctca tctgattatc
      361 tgcacaagga tattttgaca tcacggtcgg gaccatatgg tgtagacgat atcacgggca
      421 ttggtgttcg taatgatact gttcttggtg gatacacggc tggaactagt ggaaacggtt
      481 accggtcttc ttttgaagac ccgtatctac ttggaagacg agatgttatg cgcgatatgg
      541 gtgcaggagt tcgcgatata gtagatgaaa ggcctgattc tttgaggaag gctaatggtg
      601 tctcacctgg aagtcagaaa tcgaatgtat tgtttgtaga tgctctaccg cctgattgta
      661 ctcgaagaga agtatctcat ttgttccgcc cttttgttgg atttaaagaa attagactcg
      721 tgcacaagga gccaagaaat attggtgata aaaccatagt gttgtgcttt gttgagtttt
      781 cagactcgaa tcatgctcta tctgctttgg aagcccttca aggttacaag tttgacaaca
      841 agaaacccga ttcagcagcc ttacagatac attttgctca ttttccattt aaactaccac
      901 ccgataaaga ggagctaggg tttgctcact ttcaatctca accacaacgt gttaacgagg
      961 aacaagatct tgctgctaat caacaatcat tgcaactacc acccaataga gacgagcgtg
     1021 gtctacttgg tcgttatcca tctcaacaac cgtcccacaa agacgagaga gatcgtgcta
     1081 ttccaaggga gagagagatg gccgttgaag atgaggagcc tcaatcggtg aagaggaagt
     1141 ttgaaggatc aaatggatct ttaaagaaaa aagggaaagt tgaggggtct gggagtaaat
     1201 ctaagaagag ttgtgccaag tgtaagagaa agcactcagg tgaatgcttt gtgaaatcgg
     1261 gggcatgttt tcgttgcggg aaaacagacc atgtgttgaa agattgcccc gtcaaagaat
     1321 ctgttaaaag ctgttatgtt tgtggggagg aggggcacgt acgcgctcag tgccccaaga
     1381 aaactggtgc accgaagcct aataaaaaag acaaagctag ttaggttctt gttttatcca
     1441 atgcttaagc cgaagagacg tctaatatgg ttgcaggaag atgaagttga agaaattaag
     1501 aacattgtgc aaagcaaaca accacagtga agatttgcag gttcatgtta agagattaat
     1561 tttattttat ttatgttcaa acttatttag ggttatttgg gtgcttttgg tttctaactt
     1621 ccatctttaa aattttaagg tcatttatgt cgattttaaa tttgtgtact gtacaagtat
     1681 tattcttcat ttttagcaca tgtagtttgt tttgctaatt ctgtttgtga agctacacct
     1741 cttgtttaaa tagaa
//
LOCUS       XM_071829961            1632 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839800), transcript variant X2, mRNA.
ACCESSION   XM_071829961
VERSION     XM_071829961.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1632
                     /gene="LOC139839800"
                     /note="uncharacterized LOC139839800; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839800"
     CDS             114..1301
                     /gene="LOC139839800"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686062.1"
                     /db_xref="GeneID:139839800"
                     /translation="MGDPYWRYADTASASRPSYTSYLSSDVPTLSRNYLSSSSDYLHK
                     DILTSRSGPYGVDDITGIGVRNDTVLGGYTAGTSGNGYRSSFEDPYLLGRRDVMRDMG
                     AGVRDIVDERPDSLRKANGVSPGSQKSNVLFVDALPPDCTRREVSHLFRPFVGFKEIR
                     LVHKEPRNIGDKTIVLCFVEFSDSNHALSALEALQGYKFDNKKPDSAALQIHFAHFPF
                     KLPPDKEELGFAHFQSQPQRVNEEQDLAANQQSLQLPPNRDERGLLGRYPSQQPSHKD
                     ERDRAIPREREMAVEDEEPQSVKRKFEGSNGSLKKKGKVEGSGSKSKKSCAKCKRKHS
                     GECFVKSGACFRCGKTDHVLKDCPVKESVKSCYVCGEEGHVRAQCPKKTGAPKPNKKD
                     KAS"
     misc_feature    498..755
                     /gene="LOC139839800"
                     /note="RNA recognition motif (RRM) found in Arabidopsis
                     thaliana nuclear speckle RNA-binding protein A (AtNSRA)
                     and similar protein; Region: RRM_AtNSRA_like; cd21618"
                     /db_xref="CDD:410197"
     misc_feature    <1137..1259
                     /gene="LOC139839800"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 aagtctgttt tcgaattaat cgaaagttcg aaacatacac attccttttc ttcttcttta
       61 aatcaaagaa aaaaccaggg caagttcact cctcattcaa acacaaaatt tcaatggggg
      121 atccttattg gcgatatgct gacacagcta gtgcttcaag accatcctat actagttatc
      181 tatcgtctga tgtaccaacg ttgtctcgaa attacttgag cagctcatct gattatctgc
      241 acaaggatat tttgacatca cggtcgggac catatggtgt agacgatatc acgggcattg
      301 gtgttcgtaa tgatactgtt cttggtggat acacggctgg aactagtgga aacggttacc
      361 ggtcttcttt tgaagacccg tatctacttg gaagacgaga tgttatgcgc gatatgggtg
      421 caggagttcg cgatatagta gatgaaaggc ctgattcttt gaggaaggct aatggtgtct
      481 cacctggaag tcagaaatcg aatgtattgt ttgtagatgc tctaccgcct gattgtactc
      541 gaagagaagt atctcatttg ttccgccctt ttgttggatt taaagaaatt agactcgtgc
      601 acaaggagcc aagaaatatt ggtgataaaa ccatagtgtt gtgctttgtt gagttttcag
      661 actcgaatca tgctctatct gctttggaag cccttcaagg ttacaagttt gacaacaaga
      721 aacccgattc agcagcctta cagatacatt ttgctcattt tccatttaaa ctaccacccg
      781 ataaagagga gctagggttt gctcactttc aatctcaacc acaacgtgtt aacgaggaac
      841 aagatcttgc tgctaatcaa caatcattgc aactaccacc caatagagac gagcgtggtc
      901 tacttggtcg ttatccatct caacaaccgt cccacaaaga cgagagagat cgtgctattc
      961 caagggagag agagatggcc gttgaagatg aggagcctca atcggtgaag aggaagtttg
     1021 aaggatcaaa tggatcttta aagaaaaaag ggaaagttga ggggtctggg agtaaatcta
     1081 agaagagttg tgccaagtgt aagagaaagc actcaggtga atgctttgtg aaatcggggg
     1141 catgttttcg ttgcgggaaa acagaccatg tgttgaaaga ttgccccgtc aaagaatctg
     1201 ttaaaagctg ttatgtttgt ggggaggagg ggcacgtacg cgctcagtgc cccaagaaaa
     1261 ctggtgcacc gaagcctaat aaaaaagaca aagctagtta ggttcttgtt ttatccaatg
     1321 cttaagccga agagacgtct aatatggttg caggaagatg aagttgaaga aattaagaac
     1381 attgtgcaaa gcaaacaacc acagtgaaga tttgcaggtt catgttaaga gattaatttt
     1441 attttattta tgttcaaact tatttagggt tatttgggtg cttttggttt ctaacttcca
     1501 tctttaaaat tttaaggtca tttatgtcga ttttaaattt gtgtactgta caagtattat
     1561 tcttcatttt tagcacatgt agtttgtttt gctaattctg tttgtgaagc tacacctctt
     1621 gtttaaatag aa
//
LOCUS       XM_071829962            1607 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839802), mRNA.
ACCESSION   XM_071829962
VERSION     XM_071829962.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1607
                     /gene="LOC139839802"
                     /note="uncharacterized LOC139839802; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839802"
     CDS             86..1450
                     /gene="LOC139839802"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686063.1"
                     /db_xref="GeneID:139839802"
                     /translation="MERIAKLLYDASLEGNVTTLKMLIQEDPLILDKITLNHYDDMPL
                     HIASLLGHLDFVKEVLIRKPELSMEYDSQKRLALHIAAAKGHVEIVRALVSAKPMTCS
                     SLDRDGRNAIHLAAIRGRYEVVKELMQAQPHAARAMVQHDTILHLCVKYNQLEVLKLL
                     IGSVGDHEFVNGKDIDGNTILHLAVADKQIETVNFLVLDTKIDVNAVNTKGETCIEML
                     SQGPNGVKDHQIVRSLMRIGTLDKKNKYKEGFTGHSKTKTWFDHNMDKKQINIKEKKD
                     KYLENKRNTLMLIATFVATMAFQVGVNPPSGVWQDTVTATNGTKGHIAGKSVMVENHQ
                     SLYHTFLISNSLGFVSTLSIVLLLISGMPVLKLPGFLRIMQGIMWVATISMSITYTVS
                     MWAVSPNSSSKVLKIIVLSIIAVWAGLMTLMYIGLSDRIEEMLNKKSGNSIPDVIKQA
                     EIEI"
     misc_feature    95..943
                     /gene="LOC139839802"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    212..298
                     /gene="LOC139839802"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    order(320..325,332..340,344..349,359..361,368..370,
                     398..400,404..406,410..412,422..427,434..442,446..451,
                     461..463,470..472,497..499,503..505,509..511,521..526,
                     533..541,545..550,560..562)
                     /gene="LOC139839802"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    404..499
                     /gene="LOC139839802"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    611..709
                     /gene="LOC139839802"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    911..1273
                     /gene="LOC139839802"
                     /note="Domain of unknown function; Region: PGG; pfam13962"
                     /db_xref="CDD:433609"
     polyA_site      1607
                     /gene="LOC139839802"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatctataaa ataaccataa atctagtcta aaattccatc aaaattcaag aactactttg
       61 agttaactac ttcaagtttt gagaaatgga gagaattgca aaacttcttt atgatgcatc
      121 actagaagga aacgtaacaa cattaaaaat gttgattcaa gaagatccac tcattcttga
      181 taaaattaca ctaaaccatt acgacgacat gccacttcac attgcatcgt tacttggcca
      241 tcttgatttt gtcaaggagg ttctaatccg aaagcccgag ctttcaatgg agtacgattc
      301 acaaaaacgc ttggctcttc atatagcagc tgcaaaaggg catgtggaaa tagttagagc
      361 tcttgtatca gctaaaccta tgacgtgtag ttcgcttgat cgtgatggga gaaacgctat
      421 tcatctagca gcaattagag gacgatacga agttgtgaaa gagctaatgc aagctcaacc
      481 tcatgcagct agagccatgg tgcaacatga caccatcttg cacttgtgtg tcaagtataa
      541 ccaactagag gttttgaagt tgttaatagg gagtgtaggt gatcatgagt ttgttaacgg
      601 taaagatatt gatggcaata ctatactgca cctagctgtg gctgacaaac aaattgagac
      661 tgtaaacttt ttggtgctcg atacaaaaat agacgtgaat gctgtaaaca cgaaggggga
      721 aacatgtatc gaaatgctat ctcaaggtcc aaatggtgtg aaagatcatc aaatcgtacg
      781 atcactaatg cgcataggaa cacttgataa gaagaacaag tataaagaag gtttcactgg
      841 acactccaaa accaaaacgt ggtttgatca taatatggac aaaaaacaaa ttaacataaa
      901 agaaaagaag gataaatatt tggagaataa gcgaaatact ttaatgttga tcgcaacgtt
      961 cgtagcaaca atggcttttc aagtaggcgt taatccgcca agtggcgttt ggcaagacac
     1021 agtaaccgct actaacggca ctaaaggtca tatagctgga aagtctgtca tggttgagaa
     1081 tcaccaatct ttgtaccata cttttctgat ttcgaactct ttgggatttg tttcgacact
     1141 tagcatagtc ttgttgctta ttagtggaat gcctgtattg aagcttcctg gtttcttgcg
     1201 gattatgcag ggcataatgt gggtggctac gatttctatg tcgatcacgt atacggtgtc
     1261 tatgtgggca gtgagtccta attcaagctc gaaagtcctc aagataatcg tattaagtat
     1321 tattgctgta tgggcagggt tgatgactct catgtatatc ggactctcgg atcggattga
     1381 ggaaatgctc aataaaaaat cgggcaactc gataccagat gttataaaac aagcagaaat
     1441 tgaaatttaa gttatttgtg tttgtaagtc agtatgtggt ttttttaatg taattgtgac
     1501 tatgttatgt ggttacaatg acgttttagt ttatctcaac tgttttttta agtattgcat
     1561 gcatttgtaa aaatttatag tttcaataaa aagtgtgttt ctttgtc
//
LOCUS       XM_071829963            3254 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides eukaryotic translation
            initiation factor 3 subunit C-like (LOC139839803), mRNA.
ACCESSION   XM_071829963
VERSION     XM_071829963.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3254
                     /gene="LOC139839803"
                     /note="eukaryotic translation initiation factor 3 subunit
                     C-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139839803"
     CDS             160..2925
                     /gene="LOC139839803"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 3
                     subunit C-like"
                     /protein_id="XP_071686064.1"
                     /db_xref="GeneID:139839803"
                     /translation="MASKFWSNEADSETESEVSDYEQDDVNEGQEDAAPDRNKYLNTG
                     DTDSDDDDTHKRVIKSAKDKRFEELSTTIDQMKNAMKINDWVSLQESFDKINRQLEKV
                     MRVTESDRAPNNYIKALVMLEDFLNQAMANKEAKKKMSSSNAKALNAMRQKLKKNNKL
                     YEDLINKCRENPESFEDQEEEEEPSDDEDDDDDGSEIDDLTKPASESDEDEDDNDEAE
                     DETQPGWEKMMNKKDKLMEKQFKDPNQVTWDTVNKKFKEVVAARGRKGTGRLELVEQL
                     TFLTRVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLAILDILEQYP
                     NILVDDTVEPDENETQKGIDYKDTIRIWGNLAAFLEKIDVEFFKSLQCIDPHTREYVE
                     RLQDEPLFFVLAQNVQAYLERVGDFKAAAKAALKLVELVYYKPQEVYGAMKDLSEQSG
                     VGENGEEVAEESRGPPAFVNTPEIVPRKPSFPASSRALMDILVSLIYKHGDERTKARA
                     MLCDIYHHAILDEFSTSRDLLLMSHLQDSVQHMDISTQILFNRSMAQLGLCAFRAGLI
                     FEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLES
                     VHLICAMLLEVPNMAANSHDARRKVISKTLRRLLEISDRQTFTGPPENVRDHVMAATR
                     ALSKGDFQKSFDVINSLDVWRLLKNRESVLQMLKNKIKEEALRTYLFTYSSSYETLKL
                     EQLSKMFDLSDGQTHSIVSKMMINEELHASWDQPTQCIVFHEVEYSRLQGLAFQLTEK
                     LSVLAESNERAVEARLGGGGLESLPTRRREGQDYAAVAGGNKWQDNQSYSQGRQQSGY
                     GGGRPYGPGQGNQRDRTGQSKGGYQSTRYQDNAGAGTGRNYGGSAARGQMDGSNRMVS
                     LNRGTRA"
     misc_feature    322..2094
                     /gene="LOC139839803"
                     /note="Eukaryotic translation initiation factor 3 subunit
                     8 N-terminus; Region: eIF-3c_N; pfam05470"
                     /db_xref="CDD:428482"
     misc_feature    2299..2565
                     /gene="LOC139839803"
                     /note="motif in proteasome subunits, Int-6, Nip-1 and
                     TRIP-15; Region: PINT; smart00088"
                     /db_xref="CDD:214509"
ORIGIN      
        1 taagaaacct tacccgatac gaataacact tctctcacac ctgagaaaaa aaaccctaat
       61 ccgccgactc caacatccgt acgcttaagg gtctataacc gccgatctgc aatacagctt
      121 taggttttct gaaatttgca ttttttttaa gcgaagaaga tggcgtcgaa attttggagt
      181 aacgaggcgg acagtgagac tgagtctgaa gtgagtgatt atgaacaaga tgatgttaat
      241 gaaggacaag aagatgcagc accagataga aacaagtatc ttaatactgg cgatactgac
      301 agtgatgatg atgatacgca taagcgtgtt atcaagtccg caaaggataa gaggttcgag
      361 gagttgtcta cgactattga tcagatgaag aatgcgatga agatcaatga ttgggttagt
      421 ttgcaggaga gttttgacaa gattaatagg cagcttgaga aggtgatgag ggtgactgaa
      481 tctgatcggg ctccgaataa ttatattaaa gcactggtga tgttggagga ttttttgaat
      541 caagccatgg cgaataagga ggcgaagaag aagatgagta gtagcaatgc caaggctttg
      601 aatgcaatga gacagaagtt gaaaaagaac aataagctgt atgaggattt gattaataag
      661 tgcagggaga atccggaaag ttttgaggat caagaagagg aggaagagcc atcagatgat
      721 gaagatgatg acgatgacgg ttcggagatt gatgacctga cgaagccagc atcggaatca
      781 gatgaggacg aagatgataa cgatgaggcg gaagatgaga cccaacctgg ttgggagaaa
      841 atgatgaaca agaaagataa gttaatggaa aagcagttta aggatccaaa ccaggtgaca
      901 tgggatactg ttaacaagaa gttcaaggag gttgttgctg ctcgtgggag aaaagggact
      961 ggaaggctcg agcttgttga acagcttacg tttttaactc gggtggctaa aactcctgct
     1021 cagaagctag agattttgtt tagtgttgta tctgctcagt ttgatgttaa ccctggtctc
     1081 agtggtcata tgcctattaa cgtgtggaag aagtgtgtgc agaatatgct tgccatactt
     1141 gatattcttg agcagtatcc taatatccta gttgatgaca ctgtggaacc agacgagaat
     1201 gagacccaaa aaggaataga ttataaggac accatacgta tatggggaaa tttggcagct
     1261 tttcttgaga agatagatgt tgaattcttt aagagtttgc agtgtattga tcctcatacc
     1321 cgggagtatg tagaaaggct tcaagatgag cctttgtttt ttgttcttgc tcaaaacgtt
     1381 caggcatatc ttgaacgtgt tggggatttc aaggctgctg ctaaggctgc gttgaagcta
     1441 gttgaacttg tgtactacaa acctcaagaa gtttatggtg ctatgaagga cttgtctgag
     1501 caatcgggag ttggagaaaa tggagaagag gtggcagagg aaagtcgagg cccacctgct
     1561 tttgtaaaca ctcctgagat tgtgcctcga aaacctagtt ttcctgcaag tagcagggca
     1621 ctgatggaca tactggtctc tcttatatac aagcacggtg atgaaaggac caaggctcgt
     1681 gcgatgcttt gcgacattta tcaccatgca atcttggatg agttttctac atctcgagac
     1741 ttgttgctta tgagtcacct gcaggatagt gttcaacata tggatatctc gacacagata
     1801 ctctttaaca ggtcaatggc tcagcttggg ttgtgtgctt ttagggcggg acttattttc
     1861 gaaggacatg gctgcctttc cgaattatat tcgggtggcc gggtgaaaga gcttcttgca
     1921 caaggtgtct ctcaaagtcg atatcacgag aagactccag aacaggagcg tctcgaaagg
     1981 agaaggcaga tgccgtatca tatgcacatc aaccttgaac ttctggagtc tgtacacttg
     2041 atatgtgcta tgctgctaga ggttcccaat atggcagcaa acagtcatga tgctaggcgt
     2101 aaagtcataa gcaagacact gagacgatta cttgaaataa gtgacaggca gactttcacg
     2161 ggcccacctg agaacgtgcg ggaccacgtt atggctgcaa ctcgtgccct tagtaaagga
     2221 gactttcaga agtcctttga tgttatcaac tccctagatg tctggaggct tctcaaaaac
     2281 cgtgaatctg ttctacaaat gctgaaaaac aagatcaagg aggaggcttt aaggacctac
     2341 ctattcactt attcatcatc atacgagact ttaaaattgg aacagctttc aaagatgttt
     2401 gatttatctg atggtcaaac tcattccata gttagcaaga tgatgatcaa tgaagagctt
     2461 cacgcgagct gggaccaacc tactcaatgc atcgttttcc atgaagttga atatagccgt
     2521 ttacagggtc ttgctttcca gttaaccgaa aagctctcgg ttctagcaga aagtaacgag
     2581 cgtgctgtag aggctagact aggtggtggt ggtttggagt ctttacccac taggcgtcgg
     2641 gaaggtcaag actatgcagc agttgctggc ggcaataaat ggcaagacaa ccagtcatac
     2701 tcacaaggaa gacagcagtc aggatatggt ggtggtcgac cttatggtcc tggtcagggt
     2761 aatcaaaggg accgaacagg tcaatctaaa ggtgggtatc agagcacaag gtatcaagat
     2821 aatgcagggg ctgggactgg acgcaactat ggcggttctg ctgctagagg acagatggat
     2881 ggttctaacc gcatggtgag tctaaacagg gggactcgtg cttaatgaaa gtatgttcag
     2941 gtcaagatca gttatcataa acttcacaac atgcttttga atgaaagatg ccggtggggc
     3001 aagtcggcta catttgaaac acctttctag ttttgtatca tgtttgaatg aatcggattc
     3061 attagatttt tagacgactc tgaagtgatc ttagcatcac atttgctttt attgttgctt
     3121 tgggttttga caattttgat cgtgttggta aacgatttca ttttcgttcc ttaatactgc
     3181 agttggatcg aattaacgtt actcttcata tggaaacctg ttttagatct ttttaaataa
     3241 atgcaatcag cttt
//
LOCUS       XM_071829965            1618 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides anthocyanidin
            3-O-glucosyltransferase 2-like (LOC139839804), mRNA.
ACCESSION   XM_071829965
VERSION     XM_071829965.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1618
                     /gene="LOC139839804"
                     /note="anthocyanidin 3-O-glucosyltransferase 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 31 Proteins"
                     /db_xref="GeneID:139839804"
     CDS             99..1571
                     /gene="LOC139839804"
                     /codon_start=1
                     /product="anthocyanidin 3-O-glucosyltransferase 2-like"
                     /protein_id="XP_071686066.1"
                     /db_xref="GeneID:139839804"
                     /translation="MNQNEMANTIAELVFIPAPGVGHIVSTVEVAKLLVNRDQRLSIT
                     VLIIMPFKSGSDSAITTYIESLATNTLTRISFVELPQDEIGPPRDPKSPMTFFSDYIS
                     SHCKHVRKVVADMMSQPGPGRVAGFVIDMFCTSMIDVANEFNVPTFVFFTSSAAFLGF
                     KLYVQTLNDDQSKDVFELSHSDTEISVPSFIKPMPTKVFPSVLQIKEGLDFVMSSARN
                     LKKVKAIMVNTYFELETYAIESLSSDISIPPVYPVGPIISLKGESGARKQVDDDIIKW
                     LDTQPPSSVVFLCFGSMGCFNEPQVKEIARALEQSGCRFLWSLRRPPSDETSKVPGDY
                     EDPGVVLPEGFLERTEGIGKVIGWAPQVAVLAHSAVGGFVTHCGWNSLLESLWFGVPM
                     ATWPMYAEQQVNAFQMVVELGLAVEIKLDYKKNLSDINGNVVVTADEIESGISRLMTD
                     SEMRTKVKAMSDKSRSAVAEGGSSHASVGCLIQDFIRNIS"
     misc_feature    132..1568
                     /gene="LOC139839804"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(162..167,171..173,627..629,636..641,693..695,
                     795..797,972..974,1224..1226,1230..1232,1236..1241,
                     1248..1250)
                     /gene="LOC139839804"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(162..164,972..974,1224..1226,1230..1232,1236..1241)
                     /gene="LOC139839804"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    165..167
                     /gene="LOC139839804"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 ctactgccag caatgaaatg acatcagctg agctgatatt atctataagg tatacaactt
       61 aaaaacataa acgtaaaggc acttcaaaca agccattcat gaaccaaaac gaaatggcga
      121 atacaattgc agagctcgta ttcatccctg cccctggcgt tggccatatc gtgtcaaccg
      181 tggaggtcgc aaaactactg gtcaaccgag atcaacgtct ctcaataacc gtccttatca
      241 ttatgccttt caaatcgggt tctgactcag ctataacaac ctacatagaa tcattagcta
      301 ccaacactct gacccgtata tccttcgttg aactccctca agacgaaatc gggccaccac
      361 gtgacccgaa atctcccatg acatttttca gtgattacat cagcagtcac tgcaaacatg
      421 taagaaaagt agtggctgac atgatgagtc aaccgggtcc gggtcgggtt gctgggttcg
      481 tcatcgatat gttttgcacc agtatgattg atgtggctaa tgagtttaac gttccaactt
      541 ttgtgttctt tacttctagt gctgcttttc ttggattcaa attatatgtt cagacactaa
      601 acgatgatca gagcaaagat gttttcgagc taagccactc tgacactgag atatcggttc
      661 cgagttttat caaaccgatg ccaacaaaag tcttcccttc ggttcttcag attaaagaag
      721 ggctcgattt tgttatgtct tctgctcgga atttgaaaaa ggttaaagcg attatggtta
      781 atacatactt tgaacttgaa acatatgcta ttgagtcgtt gtcatctgac atcagcatcc
      841 cgccggtcta tccggtagga cccataattt ctctcaaagg tgagtctgga gcgaggaagc
      901 aggtcgatga tgacatcatc aagtggttgg acactcaacc accttcctca gtggtgttct
      961 tgtgttttgg gagtatggga tgttttaacg aaccccaagt gaaggagatt gcgcgtgctt
     1021 tagagcagag tggttgtcgt ttcttgtggt ccctacgtcg accgccatca gatgaaacat
     1081 cgaaagtccc tggtgattac gaggatccgg gagtggtatt gccagaagga tttttggagc
     1141 gaaccgaggg aatagggaaa gttatcgggt gggccccaca ggtggcggtg ttggcacata
     1201 gtgcggtagg tgggtttgtg actcattgtg ggtggaactc gttgttagag agtttgtggt
     1261 tcggggtacc aatggcaaca tggccgatgt acgctgagca acaagttaat gcatttcaaa
     1321 tggtggtgga attaggatta gctgtggaga ttaagttaga ttataaaaaa aatttgtccg
     1381 atattaatgg taatgtcgta gttacagctg acgagataga gagtgggata agccggttga
     1441 tgacggatag tgagatgcga acgaaagtga aagcgatgag cgacaagagc agatcagcag
     1501 tggcagaggg cggttcgtct catgcatctg ttggctgtct tattcaggac ttcataagaa
     1561 atatctccta aatttgcatt ttgtgaagtt aactaaacac atatatcaag tgctatca
//
LOCUS       XM_071829966            1761 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides anthocyanidin
            3-O-glucosyltransferase 2-like (LOC139839805), mRNA.
ACCESSION   XM_071829966
VERSION     XM_071829966.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1761
                     /gene="LOC139839805"
                     /note="anthocyanidin 3-O-glucosyltransferase 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 33 Proteins"
                     /db_xref="GeneID:139839805"
     CDS             209..1672
                     /gene="LOC139839805"
                     /codon_start=1
                     /product="anthocyanidin 3-O-glucosyltransferase 2-like"
                     /protein_id="XP_071686067.1"
                     /db_xref="GeneID:139839805"
                     /translation="MNQNEMANTIAELVFIPAPGVGHIMSTVEVAKLLVNRDQRLSIT
                     VLIIKPFKSGSHSAMTTFIETLATKTTNRISFIELPQDEIGPPHDPNSRMKFFTDYIS
                     SHCKHVRNVVADMINQPGSGRVAGFVVDMFCTSMIDVANEFNVPTYVFFTSGAAYLAV
                     KFYIQTFCDDLKKDFFELNRSDTEISVPSFVKPMPTKVLPPVFQFKEGLDFVLSSARD
                     LKKVKAIMVNTYFELETYAIESFSSDISVPPVYPVGPILSLKGDSESHDDDIIKWLDT
                     QPPSSVVFLCFGSMGSFNETQVKEIAHGLEQSGRRFLWSLRRPPSDETSKVPGDYEDP
                     GVVLPEGFLERTDEIGKVIGWAPQVAVLAHSAVGGFVTHCGWNSLLESLWFGVPTAAW
                     PMYAEQQVNAFQMVLELGLAVEIKLDYKKDLFDIDGNVVVTADEIESGIRRLMTDSEM
                     RTKVKAMSDKSRLAVAEGGSSYASVGCLIQDFIRNIS"
     misc_feature    242..1669
                     /gene="LOC139839805"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(272..277,281..283,737..739,776..781,791..793,
                     875..877,1073..1075,1325..1327,1331..1333,1337..1342,
                     1349..1351)
                     /gene="LOC139839805"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(272..274,1073..1075,1325..1327,1331..1333,
                     1337..1342)
                     /gene="LOC139839805"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    275..277
                     /gene="LOC139839805"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 aattgtacaa tgaagataac atttgaggtc tcagatctca atccatccac aagttttggt
       61 ttctgatgta cacagaaaac taaatggtga ttaaacgtgc tacgtttcac tactgccagc
      121 aaaaagatga catcagctga gttgttatct tctacaaggt atacaactta aaaaacataa
      181 acacaaaggc acttcaaaca aaccattcat gaaccaaaac gaaatggcga atacaattgc
      241 agagctcgta ttcatccctg cccctggcgt tggtcatatc atgtcaaccg tcgaggtcgc
      301 aaaactacta gtcaatcgag atcaacgtct ctcaataacc gtccttatca ttaagccttt
      361 taaatcgggt tctcactcag ctatgaccac cttcattgaa acattagcta ccaaaacaac
      421 aaaccgcata tccttcatcg aactccctca agacgaaatc ggtccaccac atgacccgaa
      481 ttctcgcatg aaatttttca ctgattacat cagtagtcac tgcaagcatg taagaaacgt
      541 agtggctgac atgataaatc aaccgggttc gggtcgggtt gctgggttcg tcgtcgatat
      601 gttttgcacc agtatgatag atgtggctaa tgagtttaac gttccaactt acgtgttctt
      661 cacttctggt gctgcatatc ttgcagtcaa attttatatt cagacatttt gtgatgatct
      721 gaaaaaagac tttttcgagc taaaccgctc ggacaccgag atatcggtcc cgagtttcgt
      781 caaaccaatg ccaacgaaag tgcttccgcc agtttttcag tttaaagaag ggttagattt
      841 tgttttgtca tctgcccggg atctgaaaaa ggttaaagcg attatggtta atacttactt
      901 tgaactcgaa acatatgcta ttgagtcgtt ctcatctgac atcagcgtcc caccggttta
      961 tccggtagga cctatacttt ccctcaaagg tgactctgaa tcacacgatg atgacatcat
     1021 caagtggttg gacactcaac caccttcctc agtggtgttt ttgtgttttg ggagtatggg
     1081 aagttttaat gaaacacaag tgaaggagat tgcgcatggt ttagagcaga gtggccgtcg
     1141 tttcttgtgg tccctacgtc gaccgccatc agatgaaaca tcgaaagtcc ctggtgatta
     1201 cgaggatccg ggagtggtat taccagaagg atttttggag cgaaccgatg aaatagggaa
     1261 agttatcggg tgggccccac aggtggcggt gttggctcac agtgcggtag gtgggtttgt
     1321 gactcattgt gggtggaact cgttgttaga gagcttgtgg tttggggtac caacggctgc
     1381 atggccgatg tacgctgagc aacaggttaa tgcatttcaa atggtgttgg aactgggatt
     1441 agctgtggag attaagttgg attataaaaa agatttgttc gatattgatg gaaatgtcgt
     1501 agttactgca gacgagatag agagtgggat aaggcggttg atgacggata gtgagatgcg
     1561 aacgaaagtg aaagcgatga gtgacaagag caggttagca gtggcagagg gcggttcgtc
     1621 ttatgcatct gttggctgtc ttattcaaga cttcataaga aatatctcct aaatttgcat
     1681 tttgtgaagt taactacaca tatttcaagt gttgttaagg attgtaagta ctgttttttt
     1741 taaatgaaag ttatctgctt t
//
LOCUS       XM_071829967            3772 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin response factor
            19-like (LOC139839806), transcript variant X1, mRNA.
ACCESSION   XM_071829967
VERSION     XM_071829967.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3772
                     /gene="LOC139839806"
                     /note="auxin response factor 19-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839806"
     CDS             310..3450
                     /gene="LOC139839806"
                     /codon_start=1
                     /product="auxin response factor 19-like isoform X1"
                     /protein_id="XP_071686068.1"
                     /db_xref="GeneID:139839806"
                     /translation="MKIPANNSGSSLPTANHGEGGEKIRLINPELWQACAGPLVNLPA
                     AGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLQSKLLCILHSITLHADTETDEVYA
                     QMTLQPVPSFDREALLRSDLMMKAHKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIF
                     PPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSV
                     LFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNP
                     SRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDAAR
                     WKNSQWRNLQVGWDEATAGERRNRVSIWEIEPVTTPFFICPTPPFYQSKRPRQGMLGE
                     ETADLDSLFKRTMPWLGEDMSMKDPGLSLVQWMNMQQNPSMANQIQPNYLNPLAGSVL
                     QNYGGQQMITQNNLQFNSQRSISQLDHLQKQPQPTTTNPLAMMMQPQQLTDLTQQTAR
                     QNLINQTLPQNHIQSQIHSQNILQLQQQQQQLQQQQMMTVSQSQSQSQGQGQQRIQLP
                     SQFPDQQSNQKLQISENQAQHLPKLHPHQQSFLAQGQQHPQEQGFTRSISNSQMTELP
                     SQAPITSLPQQIMRNNDEPSFRLTNLSQQPKLQHHHEMSGHMTGPTSTPTTNQLSTNG
                     SSLLTGTGSDDGPSCSTSPSTNNSQNTVPSMINSRSYQNTTMVGDHLINNTSGLETVT
                     AHGNFGKELQQKADVKPSVNISKIQNQGFLAPQTYLHNLGGTQIDYLDSSSSATSICH
                     SQNDVHLQPHNSSNMFFNSQTLPFRDTIQDGTFGVNVDNRLEISSMIPDPLIAKGMIE
                     CDKDFQNNLSSGGGLMSGYENPVKDTQPELSSSIVSQSFGVPDMTFNSIDSTINDGSL
                     LNNGVWAPPPQPQQFQRLRTYTKVYKRGAVGRSIDITAYSGYDDLKQDLARRFGIEGQ
                     LEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGGN
                     SGLQNQTCSSSGGEKV"
     misc_feature    709..1014
                     /gene="LOC139839806"
                     /note="B3 DNA binding domain; Region: B3; smart01019"
                     /db_xref="CDD:214977"
     misc_feature    order(715..717,724..726,748..750,757..759,763..765,
                     868..870,901..903,907..912,916..921)
                     /gene="LOC139839806"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:197383"
     misc_feature    1105..1341
                     /gene="LOC139839806"
                     /note="Auxin response factor; Region: Auxin_resp;
                     pfam06507"
                     /db_xref="CDD:428981"
     misc_feature    <1999..>2367
                     /gene="LOC139839806"
                     /note="Topoisomerase II-associated protein PAT1; Region:
                     PAT1; pfam09770"
                     /db_xref="CDD:401645"
     misc_feature    <3112..3348
                     /gene="LOC139839806"
                     /note="AUX/IAA family; Region: AUX_IAA; pfam02309"
                     /db_xref="CDD:460529"
ORIGIN      
        1 agaaaaaaaa aaaaaaattt gctcaaacaa tttatttaaa catataaaaa agaaataaat
       61 agattcagat acatacagca tttggtctgt gtagtactta aagacaattt tcctttatta
      121 aagttctctg gttttcaatt tgtccccttt tccgcatttt ccggtgttct tttttggttt
      181 ccgacaagta tctccggcga aacctttttt tgatcttgtt ttttaagctc cgatgagtct
      241 ccggcggtag gtgtctcccc ggtcaaattg aaaaaacaag gttggccggc gattgaattg
      301 catctagtaa tgaagattcc ggcgaacaat tccggatcga gtttacctac cgcgaatcac
      361 ggtgaaggtg gagaaaaaat tcggttaatt aatccggagt tatggcaagc gtgcgccgga
      421 cctttggtca acttaccggc ggccggtaca cacgttgttt atttccccca gggccacagc
      481 gaacaggttg ctgcatctat gaagaaggat gtggatgctc aaattccaaa ctatcccaat
      541 cttcagtcga aactgttatg catccttcat agcatcacat tgcatgctga tacagaaaca
      601 gatgaagtat atgcgcagat gacgttgcaa cccgttcctt cgtttgatag agaagcatta
      661 ttgaggtcgg atctgatgat gaaagcacac aaaccacaaa ccgagttttt ctgtaaaact
      721 ttgacagcta gtgatacaag cactcatggc ggattttctg ttcctcgtcg agcagctgaa
      781 aaaatcttcc cacctcttga tttttcgatg caaccacctg cacaagaact tgtggccaga
      841 gatttacatg acaatgtatg gacatttcgt catatctatc gtgggcaacc aaaacgtcac
      901 ttgcttacaa ccggttggag tctctttgtt agtgggaaaa ggctttttgc aggagactcg
      961 gtcttgttta taagggacga aaagcaacaa cttttattag gtattagacg agctaataga
     1021 caaccagcaa acttatcatc atcagttttg tcgagtgata gcatgcacat cggaatatta
     1081 gctgctgctg cccatgcagc tgcaaacaac agtcctttca ctgtatttta taatccaagc
     1141 agggctagtc cctctgagtt tgtaattcca ttagccaagt actacaaagc agtctgcagc
     1201 aaccaaatat ctcttggtat gcgcttccgg atgatgttcg agactgaaga gtcgggtaca
     1261 cgaaggtata tgggtacgat tacgggtatc agtgatctag atgctgcgag atggaaaaac
     1321 tcacaatggc gtaacctaca ggttggttgg gacgaagcta ccgctgggga aaggcgtaat
     1381 cgtgtctcga tatgggagat tgaaccagtt accactccct tttttatctg cccgacccca
     1441 ccgttttacc aatcgaaacg tccaagacaa ggtatgctag gtgaggaaac cgcagatctt
     1501 gacagcctat ttaagagaac aatgccgtgg ctcggtgaag atatgtcgat gaaggatcca
     1561 ggactaagtt tagtccaatg gatgaacatg cagcagaatc cgtctatggc taatcaaatc
     1621 caaccgaatt acttgaaccc attggcaggt tcggttctgc aaaattatgg tggacaacaa
     1681 atgattactc aaaataacct acagttcaat agtcaacgat cgatctcaca actcgatcac
     1741 ctacaaaagc aacctcaacc aaccactact aacccattag ccatgatgat gcaaccacaa
     1801 caattgaccg acttgaccca gcaaacagct agacaaaatc tgatcaatca aacgttgcct
     1861 caaaaccaca ttcagtccca gattcactct caaaatattc ttcaattaca acagcagcaa
     1921 caacaacttc aacagcagca gatgatgacg gtcagtcaaa gtcaaagtca aagtcaaggt
     1981 caaggtcaac agagaatcca gttgccatct cagtttccag atcaacaaag taatcaaaag
     2041 ttacagattt cagaaaacca ggctcaacat ttaccgaagc ttcatccgca tcaacaatca
     2101 tttttagcgc aagggcaaca acatccccaa gaacaaggct ttacaaggtc aatatcaaat
     2161 agtcaaatga cggaattgcc ctctcaagca cccatcacat cactaccaca acagattatg
     2221 cgaaataacg acgagccgag ttttcggtta accaatcttt ctcagcaacc aaagcttcaa
     2281 catcaccatg aaatgtcagg gcacatgaca gggcccacct caacaccaac aaccaatcag
     2341 ctttcaacaa atggtagcag tttattgacg ggaaccggga gtgatgatgg tccatcatgt
     2401 tctacatcac cgtcaactaa taacagccag aacacggtcc catctatgat caacagtcga
     2461 tcttatcaaa atacaacaat ggtgggcgat catttgatta ataataccag tggattggaa
     2521 actgtaactg cacatggcaa ttttggtaaa gaattgcagc aaaaagctga tgtgaaacct
     2581 tcagtaaaca tttcaaagat tcaaaatcaa ggctttttag caccacagac atacttgcat
     2641 aatcttggtg ggacccagat agattatttg gacagttcat catctgcaac ttcaatttgc
     2701 cattcccaga atgatgttca tttgcaacct cataactcaa gtaatatgtt cttcaactca
     2761 caaacattgc catttagaga tacaattcaa gatgggactt ttggtgtaaa cgtggacaac
     2821 cgtttggaaa tatcgtcaat gattcctgac cctttgatcg caaaaggaat gattgaatgt
     2881 gataaagatt tccagaataa tctcagctca ggtggcggct taatgtcagg ttatgaaaac
     2941 cccgttaagg atactcaacc ggaactctct tcatccatag tatctcagtc gtttggtgtt
     3001 ccagatatga ctttcaactc cattgactcg accataaacg atggaagctt attgaataat
     3061 ggtgtctggg ccccaccccc tcaacctcaa caatttcaaa gattgaggac ttataccaag
     3121 gtctacaaac gaggtgcagt tggaagatct atcgatataa ctgcatattc agggtatgac
     3181 gatctcaaac aagaccttgc tcgaaggttt ggtatcgagg gtcaattaga ggatcgtcaa
     3241 agaattggtt ggaaacttgt ctacgtggat catgagaatg acgttctact tgttggtgat
     3301 gacccttggg aggagtttgt aaactgtgta cggtgcatta agatcttgtc tcctcaagaa
     3361 gtccaacaga tgagtttgga tggagatttt ggtgggaata gtggtctaca aaatcaaact
     3421 tgcagcagtt caggtggcga aaaagtgtaa agatgctatg ctatctacaa cttttaacct
     3481 ataggaagtt cgtcgtacct agctagccat gaatttgtgt tcctagttta ttggatcacg
     3541 agttatttag caacaaatta tagactggaa agagcagtat taaacatata tcgtctagac
     3601 accatgagta ttacagataa tttatgcttt gattagtaca aaatatcatc atccatatgt
     3661 acatataaaa gtgtatactt gctttgatcc ccctataatg agagaattta tatcagttcc
     3721 attttagatg gttaaattgt actaccataa ttctatcatc atgttataca gt
//
LOCUS       XM_071829968            3769 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin response factor
            19-like (LOC139839806), transcript variant X2, mRNA.
ACCESSION   XM_071829968
VERSION     XM_071829968.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3769
                     /gene="LOC139839806"
                     /note="auxin response factor 19-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 59
                     Proteins"
                     /db_xref="GeneID:139839806"
     CDS             310..3447
                     /gene="LOC139839806"
                     /codon_start=1
                     /product="auxin response factor 19-like isoform X2"
                     /protein_id="XP_071686069.1"
                     /db_xref="GeneID:139839806"
                     /translation="MKIPANNSGSSLPTANHGEGGEKIRLINPELWQACAGPLVNLPA
                     AGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLQSKLLCILHSITLHADTETDEVYA
                     QMTLQPVPSFDREALLRSDLMMKAHKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIF
                     PPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSV
                     LFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNP
                     RASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDAARW
                     KNSQWRNLQVGWDEATAGERRNRVSIWEIEPVTTPFFICPTPPFYQSKRPRQGMLGEE
                     TADLDSLFKRTMPWLGEDMSMKDPGLSLVQWMNMQQNPSMANQIQPNYLNPLAGSVLQ
                     NYGGQQMITQNNLQFNSQRSISQLDHLQKQPQPTTTNPLAMMMQPQQLTDLTQQTARQ
                     NLINQTLPQNHIQSQIHSQNILQLQQQQQQLQQQQMMTVSQSQSQSQGQGQQRIQLPS
                     QFPDQQSNQKLQISENQAQHLPKLHPHQQSFLAQGQQHPQEQGFTRSISNSQMTELPS
                     QAPITSLPQQIMRNNDEPSFRLTNLSQQPKLQHHHEMSGHMTGPTSTPTTNQLSTNGS
                     SLLTGTGSDDGPSCSTSPSTNNSQNTVPSMINSRSYQNTTMVGDHLINNTSGLETVTA
                     HGNFGKELQQKADVKPSVNISKIQNQGFLAPQTYLHNLGGTQIDYLDSSSSATSICHS
                     QNDVHLQPHNSSNMFFNSQTLPFRDTIQDGTFGVNVDNRLEISSMIPDPLIAKGMIEC
                     DKDFQNNLSSGGGLMSGYENPVKDTQPELSSSIVSQSFGVPDMTFNSIDSTINDGSLL
                     NNGVWAPPPQPQQFQRLRTYTKVYKRGAVGRSIDITAYSGYDDLKQDLARRFGIEGQL
                     EDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGGNS
                     GLQNQTCSSSGGEKV"
     misc_feature    709..1014
                     /gene="LOC139839806"
                     /note="B3 DNA binding domain; Region: B3; smart01019"
                     /db_xref="CDD:214977"
     misc_feature    order(715..717,724..726,748..750,757..759,763..765,
                     868..870,901..903,907..912,916..921)
                     /gene="LOC139839806"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:197383"
     misc_feature    1105..1338
                     /gene="LOC139839806"
                     /note="Auxin response factor; Region: Auxin_resp;
                     pfam06507"
                     /db_xref="CDD:428981"
     misc_feature    <1996..>2364
                     /gene="LOC139839806"
                     /note="Topoisomerase II-associated protein PAT1; Region:
                     PAT1; pfam09770"
                     /db_xref="CDD:401645"
     misc_feature    <3109..3345
                     /gene="LOC139839806"
                     /note="AUX/IAA family; Region: AUX_IAA; pfam02309"
                     /db_xref="CDD:460529"
ORIGIN      
        1 agaaaaaaaa aaaaaaattt gctcaaacaa tttatttaaa catataaaaa agaaataaat
       61 agattcagat acatacagca tttggtctgt gtagtactta aagacaattt tcctttatta
      121 aagttctctg gttttcaatt tgtccccttt tccgcatttt ccggtgttct tttttggttt
      181 ccgacaagta tctccggcga aacctttttt tgatcttgtt ttttaagctc cgatgagtct
      241 ccggcggtag gtgtctcccc ggtcaaattg aaaaaacaag gttggccggc gattgaattg
      301 catctagtaa tgaagattcc ggcgaacaat tccggatcga gtttacctac cgcgaatcac
      361 ggtgaaggtg gagaaaaaat tcggttaatt aatccggagt tatggcaagc gtgcgccgga
      421 cctttggtca acttaccggc ggccggtaca cacgttgttt atttccccca gggccacagc
      481 gaacaggttg ctgcatctat gaagaaggat gtggatgctc aaattccaaa ctatcccaat
      541 cttcagtcga aactgttatg catccttcat agcatcacat tgcatgctga tacagaaaca
      601 gatgaagtat atgcgcagat gacgttgcaa cccgttcctt cgtttgatag agaagcatta
      661 ttgaggtcgg atctgatgat gaaagcacac aaaccacaaa ccgagttttt ctgtaaaact
      721 ttgacagcta gtgatacaag cactcatggc ggattttctg ttcctcgtcg agcagctgaa
      781 aaaatcttcc cacctcttga tttttcgatg caaccacctg cacaagaact tgtggccaga
      841 gatttacatg acaatgtatg gacatttcgt catatctatc gtgggcaacc aaaacgtcac
      901 ttgcttacaa ccggttggag tctctttgtt agtgggaaaa ggctttttgc aggagactcg
      961 gtcttgttta taagggacga aaagcaacaa cttttattag gtattagacg agctaataga
     1021 caaccagcaa acttatcatc atcagttttg tcgagtgata gcatgcacat cggaatatta
     1081 gctgctgctg cccatgcagc tgcaaacaac agtcctttca ctgtatttta taatccaagg
     1141 gctagtccct ctgagtttgt aattccatta gccaagtact acaaagcagt ctgcagcaac
     1201 caaatatctc ttggtatgcg cttccggatg atgttcgaga ctgaagagtc gggtacacga
     1261 aggtatatgg gtacgattac gggtatcagt gatctagatg ctgcgagatg gaaaaactca
     1321 caatggcgta acctacaggt tggttgggac gaagctaccg ctggggaaag gcgtaatcgt
     1381 gtctcgatat gggagattga accagttacc actccctttt ttatctgccc gaccccaccg
     1441 ttttaccaat cgaaacgtcc aagacaaggt atgctaggtg aggaaaccgc agatcttgac
     1501 agcctattta agagaacaat gccgtggctc ggtgaagata tgtcgatgaa ggatccagga
     1561 ctaagtttag tccaatggat gaacatgcag cagaatccgt ctatggctaa tcaaatccaa
     1621 ccgaattact tgaacccatt ggcaggttcg gttctgcaaa attatggtgg acaacaaatg
     1681 attactcaaa ataacctaca gttcaatagt caacgatcga tctcacaact cgatcaccta
     1741 caaaagcaac ctcaaccaac cactactaac ccattagcca tgatgatgca accacaacaa
     1801 ttgaccgact tgacccagca aacagctaga caaaatctga tcaatcaaac gttgcctcaa
     1861 aaccacattc agtcccagat tcactctcaa aatattcttc aattacaaca gcagcaacaa
     1921 caacttcaac agcagcagat gatgacggtc agtcaaagtc aaagtcaaag tcaaggtcaa
     1981 ggtcaacaga gaatccagtt gccatctcag tttccagatc aacaaagtaa tcaaaagtta
     2041 cagatttcag aaaaccaggc tcaacattta ccgaagcttc atccgcatca acaatcattt
     2101 ttagcgcaag ggcaacaaca tccccaagaa caaggcttta caaggtcaat atcaaatagt
     2161 caaatgacgg aattgccctc tcaagcaccc atcacatcac taccacaaca gattatgcga
     2221 aataacgacg agccgagttt tcggttaacc aatctttctc agcaaccaaa gcttcaacat
     2281 caccatgaaa tgtcagggca catgacaggg cccacctcaa caccaacaac caatcagctt
     2341 tcaacaaatg gtagcagttt attgacggga accgggagtg atgatggtcc atcatgttct
     2401 acatcaccgt caactaataa cagccagaac acggtcccat ctatgatcaa cagtcgatct
     2461 tatcaaaata caacaatggt gggcgatcat ttgattaata ataccagtgg attggaaact
     2521 gtaactgcac atggcaattt tggtaaagaa ttgcagcaaa aagctgatgt gaaaccttca
     2581 gtaaacattt caaagattca aaatcaaggc tttttagcac cacagacata cttgcataat
     2641 cttggtggga cccagataga ttatttggac agttcatcat ctgcaacttc aatttgccat
     2701 tcccagaatg atgttcattt gcaacctcat aactcaagta atatgttctt caactcacaa
     2761 acattgccat ttagagatac aattcaagat gggacttttg gtgtaaacgt ggacaaccgt
     2821 ttggaaatat cgtcaatgat tcctgaccct ttgatcgcaa aaggaatgat tgaatgtgat
     2881 aaagatttcc agaataatct cagctcaggt ggcggcttaa tgtcaggtta tgaaaacccc
     2941 gttaaggata ctcaaccgga actctcttca tccatagtat ctcagtcgtt tggtgttcca
     3001 gatatgactt tcaactccat tgactcgacc ataaacgatg gaagcttatt gaataatggt
     3061 gtctgggccc caccccctca acctcaacaa tttcaaagat tgaggactta taccaaggtc
     3121 tacaaacgag gtgcagttgg aagatctatc gatataactg catattcagg gtatgacgat
     3181 ctcaaacaag accttgctcg aaggtttggt atcgagggtc aattagagga tcgtcaaaga
     3241 attggttgga aacttgtcta cgtggatcat gagaatgacg ttctacttgt tggtgatgac
     3301 ccttgggagg agtttgtaaa ctgtgtacgg tgcattaaga tcttgtctcc tcaagaagtc
     3361 caacagatga gtttggatgg agattttggt gggaatagtg gtctacaaaa tcaaacttgc
     3421 agcagttcag gtggcgaaaa agtgtaaaga tgctatgcta tctacaactt ttaacctata
     3481 ggaagttcgt cgtacctagc tagccatgaa tttgtgttcc tagtttattg gatcacgagt
     3541 tatttagcaa caaattatag actggaaaga gcagtattaa acatatatcg tctagacacc
     3601 atgagtatta cagataattt atgctttgat tagtacaaaa tatcatcatc catatgtaca
     3661 tataaaagtg tatacttgct ttgatccccc tataatgaga gaatttatat cagttccatt
     3721 ttagatggtt aaattgtact accataattc tatcatcatg ttatacagt
//
LOCUS       XM_071829969            2572 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TORTIFOLIA1-like protein 2
            (LOC139839807), mRNA.
ACCESSION   XM_071829969
VERSION     XM_071829969.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2572
                     /gene="LOC139839807"
                     /note="TORTIFOLIA1-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839807"
     CDS             1..2427
                     /gene="LOC139839807"
                     /codon_start=1
                     /product="TORTIFOLIA1-like protein 2"
                     /protein_id="XP_071686070.1"
                     /db_xref="GeneID:139839807"
                     /translation="MKMHATLKSKGSSTRTNNQHVTFELKQRVILALNKISDRDTYEI
                     GVDELGRTIESLTADGISIFLSCILDTDSEQKIAVRKECIRLMGMLTTFHHGLIGPHL
                     GKMVVSIVKRLKDPDSVVRNACVETMGILASKFSNFEPEGSFVVLVRPLFEALGEQNK
                     HVQFGSALCLSRVIDHTRDPPLPILQRMLTRTTKMLKNPHFMAKPAVIELNRSIIQAG
                     GASTQSMLIAAMTSIQEALKNSDWRTRKAAAEALTELASSNGSCAISLKSSCIRSLEM
                     CRFDKVKPVRDAVLQALHLWKSLLGTDASELSEAGSSIKGLAMTGDYSDIPSNSESTS
                     IRKRVPLSVRNTGHSYVDSPLNPKTNDWHIEVSVPKKCNISLAYTHDEESEGSTVTKM
                     FERTKPDITLTQELGYEHAPLDGKQDCSSASTINAGPVTGDYRLKGEMVKSKGVNQHQ
                     VEEEISTEEQRYFSKSEDRTSVDSTVTDSSSQVVHEQHACCVQTAKDMVCIREKLLEI
                     ETKQSNLMNMLQMFATKTMDSLSMIQQKVSSLEDVVDQMAENVDHGGRHSELTARFLK
                     KNSTTPSPRLSTCTPRSSLDTRSRKFPLEPIRKSDSWEDSTFTRSKTDTRASTGSGSD
                     IWVDPAVKLSRNPAGKGMQKSSLGVGNHRGPNRNYGGGGGFSLNMEVEHSSCKIIKGY
                     FSQGDLDSAYVEALNSGDEMVLVDLLDKTGPVLENLSNRTANDVLSTLALFLSKQQFM
                     SSIIPWLQQAVDLSSGHGPNHFVFTAKARRQFLGAIQEVVDMEFPNATDRRSITQLVS
                     RLHQVWGKCS"
     misc_feature    <112..>600
                     /gene="LOC139839807"
                     /note="U2 snRNP spliceosome subunit [RNA processing and
                     modification]; Region: HSH155; COG5181"
                     /db_xref="CDD:227508"
     misc_feature    181..270
                     /gene="LOC139839807"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    order(241..246,253..255,265..270,364..369,376..378,
                     385..390,397..399,490..495,502..504,511..516,523..525,
                     613..618,625..627,634..639,736..741)
                     /gene="LOC139839807"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    304..399
                     /gene="LOC139839807"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    436..528
                     /gene="LOC139839807"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    559..639
                     /gene="LOC139839807"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
ORIGIN      
        1 atgaagatgc acgctacgtt aaaatcgaag ggaagttcca ctaggactaa caatcaacat
       61 gtgacttttg agctgaaaca acgagtaatt ctcgcattaa ataagatttc cgatagagat
      121 acgtatgaaa ttggggttga tgaacttgga agaacaatag aaagtttaac cgcagatgga
      181 atttcaatat tcttgtcgtg cattttagat accgattcag aacaaaaaat agctgttcgt
      241 aaggagtgta ttagattaat gggtatgctc acgactttcc atcacggtct catcgggccc
      301 cacttaggaa aaatggttgt tagtattgtt aaacgactca aggatccaga ttctgttgta
      361 agaaatgcat gtgttgagac tatgggtata ttggcgtcta aatttagtaa ttttgagcct
      421 gagggaagct ttgttgtact agtgagacct ttatttgaag cattaggcga gcaaaataaa
      481 catgttcagt ttggttcagc gttgtgttta tctcgggtaa ttgatcatac acgtgacccc
      541 ccgttgccta tactacaacg tatgctgaca aggacgacaa agatgcttaa aaatccacac
      601 tttatggcaa aaccagccgt aattgagtta aacagaagta tcattcaggc agggggggct
      661 tcgacacaaa gtatgctaat tgccgcaatg actagcatcc aagaagctct taaaaacagt
      721 gactggagaa cacgaaaagc tgctgctgaa gcattaacag aacttgcttc aagcaatgga
      781 tcatgtgcca tttctcttaa gtcatcttgc attcgttcac ttgaaatgtg tcgctttgat
      841 aaggttaaac cagttaggga cgcagtactt caagccttac atctctggaa aagtcttcta
      901 ggaacagatg catcggaact ttcagaagcc ggatcttcaa tcaaaggttt agcaatgact
      961 ggtgattaca gtgacattcc aagcaattct gaatctacgt caataagaaa acgggttcca
     1021 ctatcagtta ggaatacggg tcatagttat gtggatagtc cactgaatcc caagacaaat
     1081 gattggcata tagaagttag tgttcccaaa aaatgtaata tctctttagc gtacactcac
     1141 gatgaagagt ctgaaggtag taccgtcact aaaatgtttg aacgtactaa acctgatatc
     1201 actttgactc aagaactcgg atatgaacat gcaccgttgg atggcaaaca ggattgttca
     1261 tctgcatcca ctattaatgc gggtccggtg actggggact atcgtttaaa gggtgaaatg
     1321 gtgaaatcaa aaggagtaaa tcaacaccaa gtggaagaag aaattagtac tgaagaacaa
     1381 aggtattttt ctaaaagtga ggatcgtaca agtgttgatt caactgtcac agattcaagt
     1441 tctcaagttg tgcatgagca gcatgcgtgt tgtgtgcaaa cagcgaaaga tatggtttgc
     1501 attcgagaaa agcttctaga aatagaaacc aaacagtcga atctaatgaa tatgttgcag
     1561 atgtttgcta caaaaacaat ggatagcttg tccatgatac aacaaaaggt gtcaagttta
     1621 gaagatgtgg tggatcaaat ggcggaaaac gtcgatcacg gtggacgaca ttccgaatta
     1681 accgctcgat tcctaaaaaa gaattctact actccgtctc ctagactctc gacctgcact
     1741 ccaagatcat cattggatac acgcagtagg aaatttccgt tggagccgat aagaaaatct
     1801 gattcttggg aagactctac gtttactaga agcaaaactg acactcgtgc tagtaccggt
     1861 agcggttcag atatatgggt ggaccccgct gtaaagttaa gtagaaaccc tgcaggaaag
     1921 ggcatgcaga agagtagttt gggggtgggg aaccatcgag gaccgaatag aaactatggt
     1981 ggtggtggtg ggttcagttt gaatatggaa gtcgagcata gttcctgcaa aattattaaa
     2041 ggctactttt ctcaaggtga cttagactct gcgtacgttg aagcgttgaa ttctggtgat
     2101 gaaatggttt tagttgatct tcttgataaa acagggcctg ttttagaaaa tttatcaaat
     2161 agaactgcaa atgatgtact cagcactttg gctttgtttt tgtctaaaca gcagttcatg
     2221 agttcgataa ttccctggtt gcagcaggca gttgacttga gtagtgggca tggaccaaat
     2281 cattttgtat tcactgcaaa agcaaggaga cagttcttgg gtgcaattca agaagttgtt
     2341 gacatggagt tcccgaatgc taccgatagg aggtctatta cgcagttggt atcacgattg
     2401 catcaagttt ggggaaaatg ctcttgagat aactgcgtgt ggttgcgttg aatgcttatg
     2461 agactgatga tttacttttt tagacgttac agctcaagtg cttagttttg aattgtaggt
     2521 tgatcgttag tgaatgatag aacttgaaca tgatatgatg ttttctttcg aa
//
LOCUS       XM_071829970            1916 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL17 (LOC139839808), mRNA.
ACCESSION   XM_071829970
VERSION     XM_071829970.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1916
                     /gene="LOC139839808"
                     /note="probable serine/threonine-protein kinase PBL17;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 108 Proteins"
                     /db_xref="GeneID:139839808"
     CDS             542..1786
                     /gene="LOC139839808"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL17"
                     /protein_id="XP_071686071.1"
                     /db_xref="GeneID:139839808"
                     /translation="MGTCFSSEYDEQHCFQTKPGEIQQTPNKDALKIPSKQSVLDSPN
                     IKSPSSIVVINKDVKDLRQNPGYSNLDIFTYDEMRIATKLFRPDQVLGEGGFGVVYKG
                     VIDENVRPGYAKIQVAVKELDPEGIQGDREWLAEVNYLGQLQHPNLVKLIGYCCEEDH
                     RLLVYEYMASGSLEKNLFRRVCDTLTWSRRMKIALDAAKGLAFLHDAERPIIYRDFKT
                     SNILLDAEFNAKLSDFGLAKEGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDIY
                     GFGVVLLEMLIGRRAMDKSRPSREHNLVEWARPLLVHNKKLVRILDPRMEGQYSSKTA
                     IKVANLAYQCLSQNPKGRPVMTQVVETLESIQTRDLGQEEALFQSGSGSVTLFEAPDF
                     KKKENQVKGDGENEVPMEIKIS"
     misc_feature    812..1636
                     /gene="LOC139839808"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(812..826,836..838,893..895,899..901,986..988,
                     1034..1045,1055..1057,1061..1063,1184..1186,1190..1192,
                     1196..1201,1205..1207,1238..1240,1247..1249,1301..1312)
                     /gene="LOC139839808"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(812..826,836..838,893..895,899..901,986..988,
                     1034..1045,1055..1057,1184..1186,1190..1192,1196..1201,
                     1205..1207,1238..1240)
                     /gene="LOC139839808"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(824..826,1055..1057,1061..1063,1184..1186,
                     1190..1192,1196..1198,1247..1249,1301..1312)
                     /gene="LOC139839808"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1235..1258,1289..1312)
                     /gene="LOC139839808"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     polyA_site      1916
                     /gene="LOC139839808"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agatcttttt tctccctctg tgatcaaacc agaataattt tttatttaaa aaaagaaaga
       61 attccaataa ataaaatata ctctaatttc tgaaaaaata atcataatat tactccgata
      121 aatattagag tatactgaga aagtgagaag tatctgttgt tgtatttcta cacaaaaaaa
      181 aaaaaaaaat taataataaa aaaaaaatct ttctttatct ttattacact aacgagtttg
      241 caaattgatt tctgagtgat acccagatcg gtttctactg aaacaattac aatttctgat
      301 cacccctttt cacaatctac aaaacccaga ttgaaaaact gtagatttgt gaaaataaaa
      361 tggtaaaaat cttttcttga aataattgag aaatgttata aaacattgat gttcaacttt
      421 ttatgttcta tagtgtttat cactgtaaag tcactaacaa tgtgttgatt gtgagaaatt
      481 gaatctgggt ggattttgtt tatagattga ttgattgatt gattgattga ttgattgttt
      541 gatgggtact tgttttagtt ctgagtatga tgaacaacat tgtttccaga caaagccagg
      601 agaaattcaa caaacaccaa ataaagatgc attgaagatt ccatcaaaac agagtgtttt
      661 ggattcaccg aatattaaaa gtcccagtag tatagtggtg atcaacaaag atgttaaaga
      721 tttaaggcag aatcctggat atagtaatct tgatatattt acatacgatg agatgcgaat
      781 agccaccaaa ttatttaggc ccgatcaagt tctaggtgag ggtggattcg gtgttgttta
      841 taaaggagtt attgatgaaa atgtgagacc cggttatgca aaaattcaag ttgctgttaa
      901 agagctcgat cccgaaggaa ttcaaggtga tagggaatgg ctggctgaag tgaattattt
      961 agggcaattg caacacccga atcttgtgaa gctcattgga tattgttgtg aggaagatca
     1021 tcgtcttttg gtgtatgagt atatggcatc cgggagctta gagaaaaatt tgtttcgcag
     1081 agtatgcgat acgttaactt ggtcaagaag aatgaagatt gctttagatg ctgcaaaagg
     1141 gcttgctttt ctacatgatg ctgaaaggcc tatcatttat cgggatttca aaacatcaaa
     1201 tatcctgttg gatgcggagt tcaatgcaaa gctgtcggat tttggactag cgaaggaggg
     1261 gccaatggga gatcaaaccc atgtgtcgac tcgagttatg ggtacctacg gatatgctgc
     1321 tcctgagtat gtcatgactg gacacttgac tgcaagaagt gatatatatg ggtttggggt
     1381 ggtgcttctc gagatgttaa ttggacgaag agccatggac aagagccgcc ctagccgtga
     1441 acacaacctt gtcgaatggg ctagaccgct tcttgttcac aacaagaaac ttgtaagaat
     1501 actagacccg agaatggaag gtcaatattc atcaaaaacc gccataaaag ttgccaatct
     1561 ggcctaccaa tgtctcagtc aaaatcctaa aggtaggccc gttatgaccc aggtcgttga
     1621 gacactcgag tctattcaga cccgcgacct tggtcaagaa gaggctcttt ttcaaagtgg
     1681 gagcgggagt gtgacgttgt ttgaggcccc ggacttcaaa aagaaggaaa atcaagtcaa
     1741 aggtgatggc gaaaacgagg tcccaatgga gattaagata tcttagaatg aaatatgttt
     1801 taatgaaaac tttgttgtac aagatctatt tggatagctt ttatttttgg gttactcaga
     1861 tgtgaagttt ctgattataa attgattaga tgaaatgaaa tgaaatttct acttta
//
LOCUS       XM_071829971            6037 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like
            (LOC139839809), transcript variant X1, mRNA.
ACCESSION   XM_071829971
VERSION     XM_071829971.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6037
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6037
                     /gene="LOC139839809"
                     /note="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 23 Proteins"
                     /db_xref="GeneID:139839809"
     CDS             355..5631
                     /gene="LOC139839809"
                     /codon_start=1
                     /product="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like isoform X1"
                     /protein_id="XP_071686072.1"
                     /db_xref="GeneID:139839809"
                     /translation="MPMDASDKPLPPDPLVASFNSWITHPPANVSRDFWMPDDSCRVC
                     YECDSHFTLFNRRHHCRFCGRVFCGKCTHNWVPSPSAQHSSDSSSSNIRLCNYCFKQW
                     LQGGLVDHDPSTSPPAASFISTRSSFTADTSSCLTFASALSSFQNNPIQNQLMESNLD
                     EYDALPIRTDEQLVDVGSHSLSPVGPFLNSGDDRGDEFTYPRHLSECDDPYYDELHLD
                     DYGSRKVHPDGESADTSFSLLQNSFDSRCSKQVEKKDDVNDENEASSSLYAAQDIDAE
                     PFDFENNGELWLPPEPEDGEDEREALLYDDDDEDNNAADGVGEWGYGNSGSGELRNRD
                     KSNEEHKKAMKNVVDGHFRALVSQLLQVENLCAASDDEDDEKNNWLEIITSLSWEAAS
                     LLKPDTSKGGGMDPGGYVKIKCLASGRPMDSMVVKGVVCKKNVAHRRMTSRIEKPRLL
                     ILGGALEYQRVSNLLSSFDTLLQQEMDHLKMAVAKIDAHQPDVLLVEKSVSRYAQEYL
                     LAKDISLVLNMKRPLLERIARCTGAEIVPSVDHLSSQKLGYCDMFHVEKLLEEHGTAG
                     QGGKKLVKTLMYFEGCPKPFGCTILLRGASGDELKKVKHVVQYGVFAAYHLALETSFL
                     ADEGASLPELSLNSPLTVALPEKAASSIDRSISIIPGFTLPNNNMKDDTEQPRTDSLP
                     MSDVFSSIMNHKSQTTMLLPLVGSNNNNNIHNNQNRLPNSMLDTCVLPEAEAADVSNA
                     TGGGDPSPISSPMVTAPTEMKDIPGAPTCNGFEHPRAQGNLLKCSQIGDRVESSSDQL
                     LLDEKKEDFPPTPSADHQSILVSLSSRCVWKGSVCERSHLFRIKYYGNFDKPLGRFLR
                     DNLFDQAYRCPSCEMPSEAHVQCYTHRQGTLTISVKKLTESAPLPGENDGKIWMWHRC
                     LRCPRVNGFPPATRRIVMSDAAWGLSFGKFLELSFSNHAAASRVANCGHSLHRDCLRF
                     YGLGKMVACFSYASISVHSVYLPPSKLVFSYEKQQWIQNEVNEVVSRAELLFSEILNA
                     LTQMAEKKFGKSSANGSANMSQSRRQIADLEDMLQKEKAEFEESLEKVLNQNGPDILE
                     INRLRRQLLFQSYVWDHRLVYAASVNSSNSPRGDLPPDLNLDKSIKSPTVDSDIGETV
                     DISKKIQPEVMGGKEAEVVVVDSSPTTKEEEEENKSSLEENLDLVVGNDHGVHRAASE
                     GQLSVKASLSDTLDAAWTGNHPEPNDLDHPDNKGDDVDHYHNHTSSSLPSPAASSSST
                     TTKGQGGSESIQEDSSSSSTTTWFSMPFLNLYRSLNKNLLPNSPKLEALNEYRAVYIP
                     SYCESELHGGVHLLLPVGINDTVVPVYDDEPTSIIAYALLSPAYVSQMSGELNDGESS
                     LFSSQSADSAMFQSFRNSDNEAATLESVKSGGDESSLFSSLSGSRGSSSLVIDPLSYT
                     KALHARVDFADDGPPLGKVKYSVTCYYAKRFEALRRICCPSEFDYIRSLSRCKKWGAQ
                     GGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAHAYFKYLSESIGSGSPTCLAKILGI
                     YQVTKQMKGGKEVKMDVLVMENLLFGRNLARLYDLKGSSRSRYNPDSSGSNKVLLDQN
                     LIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDYSLLVGVDEEKHELVLGIID
                     FMRQYTWDKHLETWVKASGILGGPKNASPTVISPKQYKKRFRKAMTTYFLMVPDQWSP
                     PPPPPPPPPAAAVPSKSQKDSTSEEGQGGTYF"
     misc_feature    454..654
                     /gene="LOC139839809"
                     /note="FYVE domain like superfamily; Region: FYVE_like_SF;
                     cl28890"
                     /db_xref="CDD:333710"
     misc_feature    order(520..537,550..552,631..633)
                     /gene="LOC139839809"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]; other site"
                     /db_xref="CDD:277264"
     misc_feature    1411..2238
                     /gene="LOC139839809"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; Region:
                     Fab1_TCP; cd03334"
                     /db_xref="CDD:239450"
     misc_feature    4717..5505
                     /gene="LOC139839809"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; Region: PIPKc_PIKfyve; cd17300"
                     /db_xref="CDD:340437"
     misc_feature    order(4858..4860,4885..4887,4891..4893,5068..5079,
                     5110..5112,5167..5169,5308..5310,5353..5358)
                     /gene="LOC139839809"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340437"
     polyA_site      6037
                     /gene="LOC139839809"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccctcacatc acacaaagtc tcgatcgatt catcgatctc aaaattcttc ccatcgatta
       61 aattcaacaa atgccaaatt gaattttcta tccgactcaa ttctaaataa ttgatttcca
      121 aagtgtcccg attggtctac tgactgcgca caaagaaaca aattaaatta agttaagttg
      181 ttgagctggt tgtcaccaat tgccatctgc ttgaggagga agagtaggga acttgttgga
      241 ttattattat gatcagccga caactgcaag ttttatatat ttatttgtaa aaaatataag
      301 ctatagacac tgatgagtag cagtattgta caatgactgg aattaccgga ttttatgcct
      361 atggatgcat cagacaaacc attacctcct gatccgttgg ttgcctcatt caattcatgg
      421 atcactcatc cgccagccaa tgtgtcgagg gacttttgga tgcccgatga tagttgcagg
      481 gtgtgttacg agtgtgattc ccattttact ttattcaacc gtagacatca ttgtagattt
      541 tgtggccgtg ttttttgtgg caagtgcacc cataattggg tcccttcgcc ttctgctcaa
      601 cactctagtg attcatcttc aagtaatatc agactctgta attactgctt caaacaatgg
      661 ctgcaaggtg gcttagttga tcatgacccc agcacttcac cacccgctgc cagtttcatc
      721 agcaccagat ccagcttcac tgctgacact agtagctgct taacttttgc atctgcgctc
      781 agctcttttc aaaataatcc tattcaaaat caacttatgg aatcaaatct agatgaatat
      841 gatgcactac caatcaggac cgatgaacaa ctagtcgatg tgggatctca ctctcttagc
      901 cctgttgggc cgttcctgaa cagcggtgat gacaggggtg acgaatttac ttatccaagg
      961 catctttcgg agtgtgatga tccttattac gatgaattac atttggatga ctatgggtct
     1021 cgcaaagtac atccagatgg agaatctgct gatacaagct tctctttatt gcagaacagt
     1081 ttcgattcca ggtgctccaa acaggttgag aaaaaagatg atgttaatga tgagaatgaa
     1141 gcatcatcgt ctttatatgc tgcacaagac attgatgctg aaccttttga ttttgagaac
     1201 aatggagagc tatggttgcc tccggaacca gaagacggag aagatgaaag ggaagctctt
     1261 ttgtatgacg atgatgatga agataataat gcagcagacg gtgtgggaga gtggggatat
     1321 gggaattcag gaagtggaga gttgcgtaat agggataagt caaatgaaga gcacaagaaa
     1381 gctatgaaga atgtagttga tggacacttt agggctctag tatctcagct gttgcaggtt
     1441 gaaaaccttt gtgcagcaag tgatgatgaa gatgatgaaa aaaataattg gttagaaata
     1501 atcacatcac tctcgtggga agctgcgtca ttacttaaac cagacacaag taaaggtggt
     1561 gggatggacc caggaggtta tgtcaagatc aaatgcttag cctctggacg tcctatggac
     1621 agtatggtgg tgaaaggagt tgtatgcaaa aaaaatgtgg ctcacagaag gatgacatca
     1681 agaatagaga agccacgatt gttaattctt gggggggctc tggagtatca gcgtgtttct
     1741 aaccttctat cgagttttga tactttattg caacaggaaa tggatcatct gaagatggct
     1801 gtggcaaaga tagatgcaca ccagcctgat gttcttctgg tagaaaagtc agtttcacgg
     1861 tatgcacagg aatacctatt ggcgaaagac atatcccttg ttttgaatat gaaaaggccg
     1921 cttttagaac gaatagctcg ctgtactggt gctgagatag ttccttcggt cgatcatctt
     1981 tcgtctcaga aattaggata ctgtgatatg tttcatgttg aaaagcttct ggaagagcat
     2041 ggaactgccg gtcagggagg caagaagttg gtcaagacat tgatgtactt cgaaggctgt
     2101 ccaaaaccat ttggttgcac catattacta agaggcgcga gcggtgatga actgaagaaa
     2161 gtaaagcatg tggttcagta tggagttttt gctgcctatc atttggcctt ggagacctct
     2221 tttcttgctg atgaaggagc ctcgcttcct gaactttcat tgaattctcc attaactgtt
     2281 gcacttcctg agaaggcggc atcaagtatt gaccgctcaa tttcgataat acctggtttt
     2341 actctcccaa acaacaacat gaaagatgat accgagcaac caaggactga cagtcttccc
     2401 atgtcagatg tgttctcttc aataatgaac cacaagtcac aaacaacaat gctgttacca
     2461 cttgttggat ctaataataa taataatatt cacaacaatc aaaaccgact cccaaattcc
     2521 atgcttgaca cttgtgtact cccagaagca gaagcagcgg atgtttcaaa tgctaccggt
     2581 ggcggtgatc cctctccaat tagttcacct atggtgacgg ctccaacaga aatgaaggat
     2641 atccccggag caccaacttg taatggtttt gagcaccctc gggcacaagg aaacttgctt
     2701 aaatgctcgc aaattggtga tagagtggaa agttcttctg atcaactact gttggatgaa
     2761 aagaaggaag attttcctcc aacaccatca gcagatcatc agagcattct ggtatctttg
     2821 tcatcccgct gcgtgtggaa ggggtctgtt tgtgaaaggt cccatctctt tcgcataaaa
     2881 tactatggaa attttgataa gccgttgggg cgctttcttc gagataattt gttcgatcaa
     2941 gcttatagat gcccttcatg tgagatgcct tcggaagcac atgtacagtg ttacacccat
     3001 aggcagggta cgttaaccat atctgtgaag aagttgacgg aatcagcacc cttaccaggg
     3061 gaaaatgatg gtaagatctg gatgtggcat aggtgcttaa ggtgtccacg tgttaatggt
     3121 tttcctcctg ctactcgaag gattgtcatg tcggatgctg cctggggttt atcctttggc
     3181 aagtttttgg agcttagttt ttctaatcat gctgccgcca gcagagtcgc taactgtggt
     3241 cattctctac atcgcgactg tcttcgtttt tatgggctgg gcaaaatggt tgcctgcttc
     3301 agctatgcat caatcagcgt ccactcagtt taccttcctc cttcgaaact tgttttcagt
     3361 tatgagaagc aacagtggat acagaatgaa gtaaacgagg ttgttagccg ggctgagcta
     3421 ctattttcag aaattcttaa cgccctcacc cagatggcag agaagaaatt tggaaagagt
     3481 tcagctaatg gtagtgcgaa tatgtcacaa tcaagacgtc aaatagcaga tttggaagat
     3541 atgttacaaa aggagaaggc cgaatttgag gaatcacttg aaaaagtttt aaaccaaaat
     3601 ggtcctgata ttttggagat caaccgattg agaagacagc tgcttttcca atcttacgtg
     3661 tgggaccacc ggctggtgta tgcagctagt gttaatagta gcaacagccc ccggggtgat
     3721 ttgcctcctg acttaaactt ggataaatca atcaagtcgc caacggttga ttcagatatt
     3781 ggtgagactg ttgatatatc aaagaaaatt cagcctgaag tgatgggggg taaagaagct
     3841 gaagtggttg tagtagattc aagccctact actaaagaag aagaagaaga aaacaagtct
     3901 agccttgagg agaatcttga tctggtagta ggcaatgatc atggtgtcca tagggctgct
     3961 tctgaagggc agctgtcagt taaggcaagt ttgtcagata cgttagatgc tgcctggact
     4021 ggtaatcacc cagagccaaa tgatttagat catcctgata ataagggtga tgatgtagac
     4081 cattaccata accatacatc ttcatcactt ccatctcctg ccgcctcctc atcgtctact
     4141 actactaagg gccaaggggg ttctgaaagt atacaagaag attcatcatc atcatcaaca
     4201 acaacttggt ttagcatgcc atttttaaac ctctatcgtt ctttgaataa aaacttgtta
     4261 ccaaattccc caaagctgga ggcactaaat gagtacagag ccgtctacat cccatcgtac
     4321 tgtgaatcag aactccatgg tggagtgcac ctccttctac ctgtgggtat taatgacacc
     4381 gttgttcctg tgtatgatga cgagcccaca agtatcatag cctatgcatt gctctcacct
     4441 gcttatgttt cccagatgtc tggagagcta aatgacgggg aatcgtcgtt attttcgtct
     4501 caatctgctg actcagcgat gtttcagtct tttagaaatt cagataatga agcagcaacc
     4561 ctggaatctg ttaaaagtgg tggagatgaa agtagtttat tttcctcctt gtcaggatct
     4621 cgtgggtcct cctccctggt aatagaccca ttgtcataca caaaggcttt gcatgcgaga
     4681 gttgattttg cagacgatgg acctcctctt ggtaaagtta agtacagtgt gacttgttac
     4741 tacgctaagc ggtttgaagc attaaggagg atatgttgcc cctctgaatt tgattacata
     4801 aggtctctta gtcgttgtaa gaagtggggt gctcagggtg gtaagagcaa tgttttcttt
     4861 gcaaaaacgt tagatgaccg gtttataatc aagcaggtta caaagacaga actggagtca
     4921 ttcatcaagt ttgctcatgc ttacttcaag tatctctctg aatcaattgg ttctggaagc
     4981 cctacttgcc ttgcaaaaat attaggcatt tatcaggtga ctaagcaaat gaaagggggt
     5041 aaggaagtga aaatggatgt gttggttatg gagaatcttt tgtttggaag gaatttggca
     5101 cggctttatg atcttaaagg atcttcaagg tcacggtata atcccgattc gagtgggagc
     5161 aacaaggttc tacttgatca gaatttgatc gaagccatgc caacctctcc tatatttgtt
     5221 ggaaacaaag ccaaaagatt gcttgaaaga gccgtctgga atgacactgc ttttcttgct
     5281 tcaattgatg tgatggatta ttcgttgctg gttggggtag atgaagagaa acatgaactg
     5341 gttttaggga taatcgactt catgagacag tatacatggg acaagcatct agagacatgg
     5401 gttaaggctt ctgggattct tggtgggccc aagaatgcat ctccaactgt aatttcacct
     5461 aaacaataca agaagagatt caggaaagca atgacaacat actttctcat ggttcccgat
     5521 caatggtccc ctcctcctcc tcctcctcct cctccccctg ctgctgctgt accaagcaag
     5581 tcccaaaaag attctacttc tgaggagggc caagggggga cttacttttg atgcccacag
     5641 cttgctatat ggtttgcttt ttagtactac tttgattgat tgacgattac aaattacaat
     5701 tcgggagcga agcctttttc ttgttccaga tatagtgttg tttttacaat tcattttcag
     5761 tgtcaatatt ctcgaaaaag atacgagtgt catttgttgc aaggtgaaga aaacaaggca
     5821 ttgaggaacc tttgctaaat gattgggggt acttataatt agctgaccta cccaacaaga
     5881 aagttttgta catgagtgtg tgttttttta atatgtagat tgatagtcaa ttctctattg
     5941 ttgcttgttt gaaaagtgta tgtttgttat tgaaggttca atgctgtaac aaattataaa
     6001 tgttaaactg ctgcccaaat atttatttat ttataca
//
LOCUS       XM_071829972            6339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like
            (LOC139839809), transcript variant X2, mRNA.
ACCESSION   XM_071829972
VERSION     XM_071829972.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6339
                     /gene="LOC139839809"
                     /note="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 23 Proteins"
                     /db_xref="GeneID:139839809"
     CDS             657..5933
                     /gene="LOC139839809"
                     /codon_start=1
                     /product="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like isoform X1"
                     /protein_id="XP_071686073.1"
                     /db_xref="GeneID:139839809"
                     /translation="MPMDASDKPLPPDPLVASFNSWITHPPANVSRDFWMPDDSCRVC
                     YECDSHFTLFNRRHHCRFCGRVFCGKCTHNWVPSPSAQHSSDSSSSNIRLCNYCFKQW
                     LQGGLVDHDPSTSPPAASFISTRSSFTADTSSCLTFASALSSFQNNPIQNQLMESNLD
                     EYDALPIRTDEQLVDVGSHSLSPVGPFLNSGDDRGDEFTYPRHLSECDDPYYDELHLD
                     DYGSRKVHPDGESADTSFSLLQNSFDSRCSKQVEKKDDVNDENEASSSLYAAQDIDAE
                     PFDFENNGELWLPPEPEDGEDEREALLYDDDDEDNNAADGVGEWGYGNSGSGELRNRD
                     KSNEEHKKAMKNVVDGHFRALVSQLLQVENLCAASDDEDDEKNNWLEIITSLSWEAAS
                     LLKPDTSKGGGMDPGGYVKIKCLASGRPMDSMVVKGVVCKKNVAHRRMTSRIEKPRLL
                     ILGGALEYQRVSNLLSSFDTLLQQEMDHLKMAVAKIDAHQPDVLLVEKSVSRYAQEYL
                     LAKDISLVLNMKRPLLERIARCTGAEIVPSVDHLSSQKLGYCDMFHVEKLLEEHGTAG
                     QGGKKLVKTLMYFEGCPKPFGCTILLRGASGDELKKVKHVVQYGVFAAYHLALETSFL
                     ADEGASLPELSLNSPLTVALPEKAASSIDRSISIIPGFTLPNNNMKDDTEQPRTDSLP
                     MSDVFSSIMNHKSQTTMLLPLVGSNNNNNIHNNQNRLPNSMLDTCVLPEAEAADVSNA
                     TGGGDPSPISSPMVTAPTEMKDIPGAPTCNGFEHPRAQGNLLKCSQIGDRVESSSDQL
                     LLDEKKEDFPPTPSADHQSILVSLSSRCVWKGSVCERSHLFRIKYYGNFDKPLGRFLR
                     DNLFDQAYRCPSCEMPSEAHVQCYTHRQGTLTISVKKLTESAPLPGENDGKIWMWHRC
                     LRCPRVNGFPPATRRIVMSDAAWGLSFGKFLELSFSNHAAASRVANCGHSLHRDCLRF
                     YGLGKMVACFSYASISVHSVYLPPSKLVFSYEKQQWIQNEVNEVVSRAELLFSEILNA
                     LTQMAEKKFGKSSANGSANMSQSRRQIADLEDMLQKEKAEFEESLEKVLNQNGPDILE
                     INRLRRQLLFQSYVWDHRLVYAASVNSSNSPRGDLPPDLNLDKSIKSPTVDSDIGETV
                     DISKKIQPEVMGGKEAEVVVVDSSPTTKEEEEENKSSLEENLDLVVGNDHGVHRAASE
                     GQLSVKASLSDTLDAAWTGNHPEPNDLDHPDNKGDDVDHYHNHTSSSLPSPAASSSST
                     TTKGQGGSESIQEDSSSSSTTTWFSMPFLNLYRSLNKNLLPNSPKLEALNEYRAVYIP
                     SYCESELHGGVHLLLPVGINDTVVPVYDDEPTSIIAYALLSPAYVSQMSGELNDGESS
                     LFSSQSADSAMFQSFRNSDNEAATLESVKSGGDESSLFSSLSGSRGSSSLVIDPLSYT
                     KALHARVDFADDGPPLGKVKYSVTCYYAKRFEALRRICCPSEFDYIRSLSRCKKWGAQ
                     GGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAHAYFKYLSESIGSGSPTCLAKILGI
                     YQVTKQMKGGKEVKMDVLVMENLLFGRNLARLYDLKGSSRSRYNPDSSGSNKVLLDQN
                     LIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDYSLLVGVDEEKHELVLGIID
                     FMRQYTWDKHLETWVKASGILGGPKNASPTVISPKQYKKRFRKAMTTYFLMVPDQWSP
                     PPPPPPPPPAAAVPSKSQKDSTSEEGQGGTYF"
     misc_feature    756..956
                     /gene="LOC139839809"
                     /note="FYVE domain like superfamily; Region: FYVE_like_SF;
                     cl28890"
                     /db_xref="CDD:333710"
     misc_feature    order(822..839,852..854,933..935)
                     /gene="LOC139839809"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]; other site"
                     /db_xref="CDD:277264"
     misc_feature    1713..2540
                     /gene="LOC139839809"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; Region:
                     Fab1_TCP; cd03334"
                     /db_xref="CDD:239450"
     misc_feature    5019..5807
                     /gene="LOC139839809"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; Region: PIPKc_PIKfyve; cd17300"
                     /db_xref="CDD:340437"
     misc_feature    order(5160..5162,5187..5189,5193..5195,5370..5381,
                     5412..5414,5469..5471,5610..5612,5655..5660)
                     /gene="LOC139839809"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340437"
     polyA_site      6339
                     /gene="LOC139839809"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtctcgatcg attcatcgat ctcaaaattc ttcccatcga ttaaattcaa caaatgccaa
       61 attgaatttt ctatccgact caattctaaa taattgattt ccaaaggtat gcagttcacg
      121 gtttccctga cttttcaaat ccctcttttt ttacttttcc atttttgttt attttcttat
      181 tactgaaaac attataatta atacatataa atatataaat attactcgta aggaggggga
      241 gtcggtggga tctgattggg tttgtgattc ttatctcaag ccaaggtgtc gattcgagtt
      301 gtgttatcat tttctatatt gtcccgattg gtctactgac tgcgcacgta agtggaaaaa
      361 tctcaaggct ttctatttat ttacgtattt atacatctat ctatttgatc aatcaattaa
      421 tcattcaacc cgccatctgc ttgaattgaa cagaaagaaa caaattaaat taagttaagt
      481 tgttgagctg gttgtcacca attgccatct gcttgaggag gaagagtagg gaacttgttg
      541 gattattatt atgatcagcc gacaactgca agttttatat atttatttgt aaaaaatata
      601 agctatagac actgatgagt agcagtattg tacaatgact ggaattaccg gattttatgc
      661 ctatggatgc atcagacaaa ccattacctc ctgatccgtt ggttgcctca ttcaattcat
      721 ggatcactca tccgccagcc aatgtgtcga gggacttttg gatgcccgat gatagttgca
      781 gggtgtgtta cgagtgtgat tcccatttta ctttattcaa ccgtagacat cattgtagat
      841 tttgtggccg tgttttttgt ggcaagtgca cccataattg ggtcccttcg ccttctgctc
      901 aacactctag tgattcatct tcaagtaata tcagactctg taattactgc ttcaaacaat
      961 ggctgcaagg tggcttagtt gatcatgacc ccagcacttc accacccgct gccagtttca
     1021 tcagcaccag atccagcttc actgctgaca ctagtagctg cttaactttt gcatctgcgc
     1081 tcagctcttt tcaaaataat cctattcaaa atcaacttat ggaatcaaat ctagatgaat
     1141 atgatgcact accaatcagg accgatgaac aactagtcga tgtgggatct cactctctta
     1201 gccctgttgg gccgttcctg aacagcggtg atgacagggg tgacgaattt acttatccaa
     1261 ggcatctttc ggagtgtgat gatccttatt acgatgaatt acatttggat gactatgggt
     1321 ctcgcaaagt acatccagat ggagaatctg ctgatacaag cttctcttta ttgcagaaca
     1381 gtttcgattc caggtgctcc aaacaggttg agaaaaaaga tgatgttaat gatgagaatg
     1441 aagcatcatc gtctttatat gctgcacaag acattgatgc tgaacctttt gattttgaga
     1501 acaatggaga gctatggttg cctccggaac cagaagacgg agaagatgaa agggaagctc
     1561 ttttgtatga cgatgatgat gaagataata atgcagcaga cggtgtggga gagtggggat
     1621 atgggaattc aggaagtgga gagttgcgta atagggataa gtcaaatgaa gagcacaaga
     1681 aagctatgaa gaatgtagtt gatggacact ttagggctct agtatctcag ctgttgcagg
     1741 ttgaaaacct ttgtgcagca agtgatgatg aagatgatga aaaaaataat tggttagaaa
     1801 taatcacatc actctcgtgg gaagctgcgt cattacttaa accagacaca agtaaaggtg
     1861 gtgggatgga cccaggaggt tatgtcaaga tcaaatgctt agcctctgga cgtcctatgg
     1921 acagtatggt ggtgaaagga gttgtatgca aaaaaaatgt ggctcacaga aggatgacat
     1981 caagaataga gaagccacga ttgttaattc ttgggggggc tctggagtat cagcgtgttt
     2041 ctaaccttct atcgagtttt gatactttat tgcaacagga aatggatcat ctgaagatgg
     2101 ctgtggcaaa gatagatgca caccagcctg atgttcttct ggtagaaaag tcagtttcac
     2161 ggtatgcaca ggaataccta ttggcgaaag acatatccct tgttttgaat atgaaaaggc
     2221 cgcttttaga acgaatagct cgctgtactg gtgctgagat agttccttcg gtcgatcatc
     2281 tttcgtctca gaaattagga tactgtgata tgtttcatgt tgaaaagctt ctggaagagc
     2341 atggaactgc cggtcaggga ggcaagaagt tggtcaagac attgatgtac ttcgaaggct
     2401 gtccaaaacc atttggttgc accatattac taagaggcgc gagcggtgat gaactgaaga
     2461 aagtaaagca tgtggttcag tatggagttt ttgctgccta tcatttggcc ttggagacct
     2521 cttttcttgc tgatgaagga gcctcgcttc ctgaactttc attgaattct ccattaactg
     2581 ttgcacttcc tgagaaggcg gcatcaagta ttgaccgctc aatttcgata atacctggtt
     2641 ttactctccc aaacaacaac atgaaagatg ataccgagca accaaggact gacagtcttc
     2701 ccatgtcaga tgtgttctct tcaataatga accacaagtc acaaacaaca atgctgttac
     2761 cacttgttgg atctaataat aataataata ttcacaacaa tcaaaaccga ctcccaaatt
     2821 ccatgcttga cacttgtgta ctcccagaag cagaagcagc ggatgtttca aatgctaccg
     2881 gtggcggtga tccctctcca attagttcac ctatggtgac ggctccaaca gaaatgaagg
     2941 atatccccgg agcaccaact tgtaatggtt ttgagcaccc tcgggcacaa ggaaacttgc
     3001 ttaaatgctc gcaaattggt gatagagtgg aaagttcttc tgatcaacta ctgttggatg
     3061 aaaagaagga agattttcct ccaacaccat cagcagatca tcagagcatt ctggtatctt
     3121 tgtcatcccg ctgcgtgtgg aaggggtctg tttgtgaaag gtcccatctc tttcgcataa
     3181 aatactatgg aaattttgat aagccgttgg ggcgctttct tcgagataat ttgttcgatc
     3241 aagcttatag atgcccttca tgtgagatgc cttcggaagc acatgtacag tgttacaccc
     3301 ataggcaggg tacgttaacc atatctgtga agaagttgac ggaatcagca cccttaccag
     3361 gggaaaatga tggtaagatc tggatgtggc ataggtgctt aaggtgtcca cgtgttaatg
     3421 gttttcctcc tgctactcga aggattgtca tgtcggatgc tgcctggggt ttatcctttg
     3481 gcaagttttt ggagcttagt ttttctaatc atgctgccgc cagcagagtc gctaactgtg
     3541 gtcattctct acatcgcgac tgtcttcgtt tttatgggct gggcaaaatg gttgcctgct
     3601 tcagctatgc atcaatcagc gtccactcag tttaccttcc tccttcgaaa cttgttttca
     3661 gttatgagaa gcaacagtgg atacagaatg aagtaaacga ggttgttagc cgggctgagc
     3721 tactattttc agaaattctt aacgccctca cccagatggc agagaagaaa tttggaaaga
     3781 gttcagctaa tggtagtgcg aatatgtcac aatcaagacg tcaaatagca gatttggaag
     3841 atatgttaca aaaggagaag gccgaatttg aggaatcact tgaaaaagtt ttaaaccaaa
     3901 atggtcctga tattttggag atcaaccgat tgagaagaca gctgcttttc caatcttacg
     3961 tgtgggacca ccggctggtg tatgcagcta gtgttaatag tagcaacagc ccccggggtg
     4021 atttgcctcc tgacttaaac ttggataaat caatcaagtc gccaacggtt gattcagata
     4081 ttggtgagac tgttgatata tcaaagaaaa ttcagcctga agtgatgggg ggtaaagaag
     4141 ctgaagtggt tgtagtagat tcaagcccta ctactaaaga agaagaagaa gaaaacaagt
     4201 ctagccttga ggagaatctt gatctggtag taggcaatga tcatggtgtc catagggctg
     4261 cttctgaagg gcagctgtca gttaaggcaa gtttgtcaga tacgttagat gctgcctgga
     4321 ctggtaatca cccagagcca aatgatttag atcatcctga taataagggt gatgatgtag
     4381 accattacca taaccataca tcttcatcac ttccatctcc tgccgcctcc tcatcgtcta
     4441 ctactactaa gggccaaggg ggttctgaaa gtatacaaga agattcatca tcatcatcaa
     4501 caacaacttg gtttagcatg ccatttttaa acctctatcg ttctttgaat aaaaacttgt
     4561 taccaaattc cccaaagctg gaggcactaa atgagtacag agccgtctac atcccatcgt
     4621 actgtgaatc agaactccat ggtggagtgc acctccttct acctgtgggt attaatgaca
     4681 ccgttgttcc tgtgtatgat gacgagccca caagtatcat agcctatgca ttgctctcac
     4741 ctgcttatgt ttcccagatg tctggagagc taaatgacgg ggaatcgtcg ttattttcgt
     4801 ctcaatctgc tgactcagcg atgtttcagt cttttagaaa ttcagataat gaagcagcaa
     4861 ccctggaatc tgttaaaagt ggtggagatg aaagtagttt attttcctcc ttgtcaggat
     4921 ctcgtgggtc ctcctccctg gtaatagacc cattgtcata cacaaaggct ttgcatgcga
     4981 gagttgattt tgcagacgat ggacctcctc ttggtaaagt taagtacagt gtgacttgtt
     5041 actacgctaa gcggtttgaa gcattaagga ggatatgttg cccctctgaa tttgattaca
     5101 taaggtctct tagtcgttgt aagaagtggg gtgctcaggg tggtaagagc aatgttttct
     5161 ttgcaaaaac gttagatgac cggtttataa tcaagcaggt tacaaagaca gaactggagt
     5221 cattcatcaa gtttgctcat gcttacttca agtatctctc tgaatcaatt ggttctggaa
     5281 gccctacttg ccttgcaaaa atattaggca tttatcaggt gactaagcaa atgaaagggg
     5341 gtaaggaagt gaaaatggat gtgttggtta tggagaatct tttgtttgga aggaatttgg
     5401 cacggcttta tgatcttaaa ggatcttcaa ggtcacggta taatcccgat tcgagtggga
     5461 gcaacaaggt tctacttgat cagaatttga tcgaagccat gccaacctct cctatatttg
     5521 ttggaaacaa agccaaaaga ttgcttgaaa gagccgtctg gaatgacact gcttttcttg
     5581 cttcaattga tgtgatggat tattcgttgc tggttggggt agatgaagag aaacatgaac
     5641 tggttttagg gataatcgac ttcatgagac agtatacatg ggacaagcat ctagagacat
     5701 gggttaaggc ttctgggatt cttggtgggc ccaagaatgc atctccaact gtaatttcac
     5761 ctaaacaata caagaagaga ttcaggaaag caatgacaac atactttctc atggttcccg
     5821 atcaatggtc ccctcctcct cctcctcctc ctcctccccc tgctgctgct gtaccaagca
     5881 agtcccaaaa agattctact tctgaggagg gccaaggggg gacttacttt tgatgcccac
     5941 agcttgctat atggtttgct ttttagtact actttgattg attgacgatt acaaattaca
     6001 attcgggagc gaagcctttt tcttgttcca gatatagtgt tgtttttaca attcattttc
     6061 agtgtcaata ttctcgaaaa agatacgagt gtcatttgtt gcaaggtgaa gaaaacaagg
     6121 cattgaggaa cctttgctaa atgattgggg gtacttataa ttagctgacc tacccaacaa
     6181 gaaagttttg tacatgagtg tgtgtttttt taatatgtag attgatagtc aattctctat
     6241 tgttgcttgt ttgaaaagtg tatgtttgtt attgaaggtt caatgctgta acaaattata
     6301 aatgttaaac tgctgcccaa atatttattt atttataca
//
LOCUS       XM_071829973            6199 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like
            (LOC139839809), transcript variant X3, mRNA.
ACCESSION   XM_071829973
VERSION     XM_071829973.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6199
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6199
                     /gene="LOC139839809"
                     /note="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 23 Proteins"
                     /db_xref="GeneID:139839809"
     CDS             517..5793
                     /gene="LOC139839809"
                     /codon_start=1
                     /product="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like isoform X1"
                     /protein_id="XP_071686074.1"
                     /db_xref="GeneID:139839809"
                     /translation="MPMDASDKPLPPDPLVASFNSWITHPPANVSRDFWMPDDSCRVC
                     YECDSHFTLFNRRHHCRFCGRVFCGKCTHNWVPSPSAQHSSDSSSSNIRLCNYCFKQW
                     LQGGLVDHDPSTSPPAASFISTRSSFTADTSSCLTFASALSSFQNNPIQNQLMESNLD
                     EYDALPIRTDEQLVDVGSHSLSPVGPFLNSGDDRGDEFTYPRHLSECDDPYYDELHLD
                     DYGSRKVHPDGESADTSFSLLQNSFDSRCSKQVEKKDDVNDENEASSSLYAAQDIDAE
                     PFDFENNGELWLPPEPEDGEDEREALLYDDDDEDNNAADGVGEWGYGNSGSGELRNRD
                     KSNEEHKKAMKNVVDGHFRALVSQLLQVENLCAASDDEDDEKNNWLEIITSLSWEAAS
                     LLKPDTSKGGGMDPGGYVKIKCLASGRPMDSMVVKGVVCKKNVAHRRMTSRIEKPRLL
                     ILGGALEYQRVSNLLSSFDTLLQQEMDHLKMAVAKIDAHQPDVLLVEKSVSRYAQEYL
                     LAKDISLVLNMKRPLLERIARCTGAEIVPSVDHLSSQKLGYCDMFHVEKLLEEHGTAG
                     QGGKKLVKTLMYFEGCPKPFGCTILLRGASGDELKKVKHVVQYGVFAAYHLALETSFL
                     ADEGASLPELSLNSPLTVALPEKAASSIDRSISIIPGFTLPNNNMKDDTEQPRTDSLP
                     MSDVFSSIMNHKSQTTMLLPLVGSNNNNNIHNNQNRLPNSMLDTCVLPEAEAADVSNA
                     TGGGDPSPISSPMVTAPTEMKDIPGAPTCNGFEHPRAQGNLLKCSQIGDRVESSSDQL
                     LLDEKKEDFPPTPSADHQSILVSLSSRCVWKGSVCERSHLFRIKYYGNFDKPLGRFLR
                     DNLFDQAYRCPSCEMPSEAHVQCYTHRQGTLTISVKKLTESAPLPGENDGKIWMWHRC
                     LRCPRVNGFPPATRRIVMSDAAWGLSFGKFLELSFSNHAAASRVANCGHSLHRDCLRF
                     YGLGKMVACFSYASISVHSVYLPPSKLVFSYEKQQWIQNEVNEVVSRAELLFSEILNA
                     LTQMAEKKFGKSSANGSANMSQSRRQIADLEDMLQKEKAEFEESLEKVLNQNGPDILE
                     INRLRRQLLFQSYVWDHRLVYAASVNSSNSPRGDLPPDLNLDKSIKSPTVDSDIGETV
                     DISKKIQPEVMGGKEAEVVVVDSSPTTKEEEEENKSSLEENLDLVVGNDHGVHRAASE
                     GQLSVKASLSDTLDAAWTGNHPEPNDLDHPDNKGDDVDHYHNHTSSSLPSPAASSSST
                     TTKGQGGSESIQEDSSSSSTTTWFSMPFLNLYRSLNKNLLPNSPKLEALNEYRAVYIP
                     SYCESELHGGVHLLLPVGINDTVVPVYDDEPTSIIAYALLSPAYVSQMSGELNDGESS
                     LFSSQSADSAMFQSFRNSDNEAATLESVKSGGDESSLFSSLSGSRGSSSLVIDPLSYT
                     KALHARVDFADDGPPLGKVKYSVTCYYAKRFEALRRICCPSEFDYIRSLSRCKKWGAQ
                     GGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAHAYFKYLSESIGSGSPTCLAKILGI
                     YQVTKQMKGGKEVKMDVLVMENLLFGRNLARLYDLKGSSRSRYNPDSSGSNKVLLDQN
                     LIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDYSLLVGVDEEKHELVLGIID
                     FMRQYTWDKHLETWVKASGILGGPKNASPTVISPKQYKKRFRKAMTTYFLMVPDQWSP
                     PPPPPPPPPAAAVPSKSQKDSTSEEGQGGTYF"
     misc_feature    616..816
                     /gene="LOC139839809"
                     /note="FYVE domain like superfamily; Region: FYVE_like_SF;
                     cl28890"
                     /db_xref="CDD:333710"
     misc_feature    order(682..699,712..714,793..795)
                     /gene="LOC139839809"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]; other site"
                     /db_xref="CDD:277264"
     misc_feature    1573..2400
                     /gene="LOC139839809"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; Region:
                     Fab1_TCP; cd03334"
                     /db_xref="CDD:239450"
     misc_feature    4879..5667
                     /gene="LOC139839809"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; Region: PIPKc_PIKfyve; cd17300"
                     /db_xref="CDD:340437"
     misc_feature    order(5020..5022,5047..5049,5053..5055,5230..5241,
                     5272..5274,5329..5331,5470..5472,5515..5520)
                     /gene="LOC139839809"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340437"
     polyA_site      6199
                     /gene="LOC139839809"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtctcgatcg attcatcgat ctcaaaattc ttcccatcga ttaaattcaa caaatgccaa
       61 attgaatttt ctatccgact caattctaaa taattgattt ccaaaggtat gcagttcacg
      121 gtttccctga cttttcaaat ccctcttttt ttacttttcc atttttgttt attttcttat
      181 tactgaaaac attataatta atacatataa atatataaat attactcgta aggaggggga
      241 gtcggtggga tctgattggg tttgtgattc ttatctcaag ccaagtgtcc cgattggtct
      301 actgactgcg cacaaagaaa caaattaaat taagttaagt tgttgagctg gttgtcacca
      361 attgccatct gcttgaggag gaagagtagg gaacttgttg gattattatt atgatcagcc
      421 gacaactgca agttttatat atttatttgt aaaaaatata agctatagac actgatgagt
      481 agcagtattg tacaatgact ggaattaccg gattttatgc ctatggatgc atcagacaaa
      541 ccattacctc ctgatccgtt ggttgcctca ttcaattcat ggatcactca tccgccagcc
      601 aatgtgtcga gggacttttg gatgcccgat gatagttgca gggtgtgtta cgagtgtgat
      661 tcccatttta ctttattcaa ccgtagacat cattgtagat tttgtggccg tgttttttgt
      721 ggcaagtgca cccataattg ggtcccttcg ccttctgctc aacactctag tgattcatct
      781 tcaagtaata tcagactctg taattactgc ttcaaacaat ggctgcaagg tggcttagtt
      841 gatcatgacc ccagcacttc accacccgct gccagtttca tcagcaccag atccagcttc
      901 actgctgaca ctagtagctg cttaactttt gcatctgcgc tcagctcttt tcaaaataat
      961 cctattcaaa atcaacttat ggaatcaaat ctagatgaat atgatgcact accaatcagg
     1021 accgatgaac aactagtcga tgtgggatct cactctctta gccctgttgg gccgttcctg
     1081 aacagcggtg atgacagggg tgacgaattt acttatccaa ggcatctttc ggagtgtgat
     1141 gatccttatt acgatgaatt acatttggat gactatgggt ctcgcaaagt acatccagat
     1201 ggagaatctg ctgatacaag cttctcttta ttgcagaaca gtttcgattc caggtgctcc
     1261 aaacaggttg agaaaaaaga tgatgttaat gatgagaatg aagcatcatc gtctttatat
     1321 gctgcacaag acattgatgc tgaacctttt gattttgaga acaatggaga gctatggttg
     1381 cctccggaac cagaagacgg agaagatgaa agggaagctc ttttgtatga cgatgatgat
     1441 gaagataata atgcagcaga cggtgtggga gagtggggat atgggaattc aggaagtgga
     1501 gagttgcgta atagggataa gtcaaatgaa gagcacaaga aagctatgaa gaatgtagtt
     1561 gatggacact ttagggctct agtatctcag ctgttgcagg ttgaaaacct ttgtgcagca
     1621 agtgatgatg aagatgatga aaaaaataat tggttagaaa taatcacatc actctcgtgg
     1681 gaagctgcgt cattacttaa accagacaca agtaaaggtg gtgggatgga cccaggaggt
     1741 tatgtcaaga tcaaatgctt agcctctgga cgtcctatgg acagtatggt ggtgaaagga
     1801 gttgtatgca aaaaaaatgt ggctcacaga aggatgacat caagaataga gaagccacga
     1861 ttgttaattc ttgggggggc tctggagtat cagcgtgttt ctaaccttct atcgagtttt
     1921 gatactttat tgcaacagga aatggatcat ctgaagatgg ctgtggcaaa gatagatgca
     1981 caccagcctg atgttcttct ggtagaaaag tcagtttcac ggtatgcaca ggaataccta
     2041 ttggcgaaag acatatccct tgttttgaat atgaaaaggc cgcttttaga acgaatagct
     2101 cgctgtactg gtgctgagat agttccttcg gtcgatcatc tttcgtctca gaaattagga
     2161 tactgtgata tgtttcatgt tgaaaagctt ctggaagagc atggaactgc cggtcaggga
     2221 ggcaagaagt tggtcaagac attgatgtac ttcgaaggct gtccaaaacc atttggttgc
     2281 accatattac taagaggcgc gagcggtgat gaactgaaga aagtaaagca tgtggttcag
     2341 tatggagttt ttgctgccta tcatttggcc ttggagacct cttttcttgc tgatgaagga
     2401 gcctcgcttc ctgaactttc attgaattct ccattaactg ttgcacttcc tgagaaggcg
     2461 gcatcaagta ttgaccgctc aatttcgata atacctggtt ttactctccc aaacaacaac
     2521 atgaaagatg ataccgagca accaaggact gacagtcttc ccatgtcaga tgtgttctct
     2581 tcaataatga accacaagtc acaaacaaca atgctgttac cacttgttgg atctaataat
     2641 aataataata ttcacaacaa tcaaaaccga ctcccaaatt ccatgcttga cacttgtgta
     2701 ctcccagaag cagaagcagc ggatgtttca aatgctaccg gtggcggtga tccctctcca
     2761 attagttcac ctatggtgac ggctccaaca gaaatgaagg atatccccgg agcaccaact
     2821 tgtaatggtt ttgagcaccc tcgggcacaa ggaaacttgc ttaaatgctc gcaaattggt
     2881 gatagagtgg aaagttcttc tgatcaacta ctgttggatg aaaagaagga agattttcct
     2941 ccaacaccat cagcagatca tcagagcatt ctggtatctt tgtcatcccg ctgcgtgtgg
     3001 aaggggtctg tttgtgaaag gtcccatctc tttcgcataa aatactatgg aaattttgat
     3061 aagccgttgg ggcgctttct tcgagataat ttgttcgatc aagcttatag atgcccttca
     3121 tgtgagatgc cttcggaagc acatgtacag tgttacaccc ataggcaggg tacgttaacc
     3181 atatctgtga agaagttgac ggaatcagca cccttaccag gggaaaatga tggtaagatc
     3241 tggatgtggc ataggtgctt aaggtgtcca cgtgttaatg gttttcctcc tgctactcga
     3301 aggattgtca tgtcggatgc tgcctggggt ttatcctttg gcaagttttt ggagcttagt
     3361 ttttctaatc atgctgccgc cagcagagtc gctaactgtg gtcattctct acatcgcgac
     3421 tgtcttcgtt tttatgggct gggcaaaatg gttgcctgct tcagctatgc atcaatcagc
     3481 gtccactcag tttaccttcc tccttcgaaa cttgttttca gttatgagaa gcaacagtgg
     3541 atacagaatg aagtaaacga ggttgttagc cgggctgagc tactattttc agaaattctt
     3601 aacgccctca cccagatggc agagaagaaa tttggaaaga gttcagctaa tggtagtgcg
     3661 aatatgtcac aatcaagacg tcaaatagca gatttggaag atatgttaca aaaggagaag
     3721 gccgaatttg aggaatcact tgaaaaagtt ttaaaccaaa atggtcctga tattttggag
     3781 atcaaccgat tgagaagaca gctgcttttc caatcttacg tgtgggacca ccggctggtg
     3841 tatgcagcta gtgttaatag tagcaacagc ccccggggtg atttgcctcc tgacttaaac
     3901 ttggataaat caatcaagtc gccaacggtt gattcagata ttggtgagac tgttgatata
     3961 tcaaagaaaa ttcagcctga agtgatgggg ggtaaagaag ctgaagtggt tgtagtagat
     4021 tcaagcccta ctactaaaga agaagaagaa gaaaacaagt ctagccttga ggagaatctt
     4081 gatctggtag taggcaatga tcatggtgtc catagggctg cttctgaagg gcagctgtca
     4141 gttaaggcaa gtttgtcaga tacgttagat gctgcctgga ctggtaatca cccagagcca
     4201 aatgatttag atcatcctga taataagggt gatgatgtag accattacca taaccataca
     4261 tcttcatcac ttccatctcc tgccgcctcc tcatcgtcta ctactactaa gggccaaggg
     4321 ggttctgaaa gtatacaaga agattcatca tcatcatcaa caacaacttg gtttagcatg
     4381 ccatttttaa acctctatcg ttctttgaat aaaaacttgt taccaaattc cccaaagctg
     4441 gaggcactaa atgagtacag agccgtctac atcccatcgt actgtgaatc agaactccat
     4501 ggtggagtgc acctccttct acctgtgggt attaatgaca ccgttgttcc tgtgtatgat
     4561 gacgagccca caagtatcat agcctatgca ttgctctcac ctgcttatgt ttcccagatg
     4621 tctggagagc taaatgacgg ggaatcgtcg ttattttcgt ctcaatctgc tgactcagcg
     4681 atgtttcagt cttttagaaa ttcagataat gaagcagcaa ccctggaatc tgttaaaagt
     4741 ggtggagatg aaagtagttt attttcctcc ttgtcaggat ctcgtgggtc ctcctccctg
     4801 gtaatagacc cattgtcata cacaaaggct ttgcatgcga gagttgattt tgcagacgat
     4861 ggacctcctc ttggtaaagt taagtacagt gtgacttgtt actacgctaa gcggtttgaa
     4921 gcattaagga ggatatgttg cccctctgaa tttgattaca taaggtctct tagtcgttgt
     4981 aagaagtggg gtgctcaggg tggtaagagc aatgttttct ttgcaaaaac gttagatgac
     5041 cggtttataa tcaagcaggt tacaaagaca gaactggagt cattcatcaa gtttgctcat
     5101 gcttacttca agtatctctc tgaatcaatt ggttctggaa gccctacttg ccttgcaaaa
     5161 atattaggca tttatcaggt gactaagcaa atgaaagggg gtaaggaagt gaaaatggat
     5221 gtgttggtta tggagaatct tttgtttgga aggaatttgg cacggcttta tgatcttaaa
     5281 ggatcttcaa ggtcacggta taatcccgat tcgagtggga gcaacaaggt tctacttgat
     5341 cagaatttga tcgaagccat gccaacctct cctatatttg ttggaaacaa agccaaaaga
     5401 ttgcttgaaa gagccgtctg gaatgacact gcttttcttg cttcaattga tgtgatggat
     5461 tattcgttgc tggttggggt agatgaagag aaacatgaac tggttttagg gataatcgac
     5521 ttcatgagac agtatacatg ggacaagcat ctagagacat gggttaaggc ttctgggatt
     5581 cttggtgggc ccaagaatgc atctccaact gtaatttcac ctaaacaata caagaagaga
     5641 ttcaggaaag caatgacaac atactttctc atggttcccg atcaatggtc ccctcctcct
     5701 cctcctcctc ctcctccccc tgctgctgct gtaccaagca agtcccaaaa agattctact
     5761 tctgaggagg gccaaggggg gacttacttt tgatgcccac agcttgctat atggtttgct
     5821 ttttagtact actttgattg attgacgatt acaaattaca attcgggagc gaagcctttt
     5881 tcttgttcca gatatagtgt tgtttttaca attcattttc agtgtcaata ttctcgaaaa
     5941 agatacgagt gtcatttgtt gcaaggtgaa gaaaacaagg cattgaggaa cctttgctaa
     6001 atgattgggg gtacttataa ttagctgacc tacccaacaa gaaagttttg tacatgagtg
     6061 tgtgtttttt taatatgtag attgatagtc aattctctat tgttgcttgt ttgaaaagtg
     6121 tatgtttgtt attgaaggtt caatgctgta acaaattata aatgttaaac tgctgcccaa
     6181 atatttattt atttataca
//
LOCUS       XM_071829974            6025 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like
            (LOC139839809), transcript variant X4, mRNA.
ACCESSION   XM_071829974
VERSION     XM_071829974.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6025
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6025
                     /gene="LOC139839809"
                     /note="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 23 Proteins"
                     /db_xref="GeneID:139839809"
     CDS             355..5619
                     /gene="LOC139839809"
                     /codon_start=1
                     /product="1-phosphatidylinositol-3-phosphate 5-kinase
                     FAB1B-like isoform X2"
                     /protein_id="XP_071686075.1"
                     /db_xref="GeneID:139839809"
                     /translation="MPMDASDKPLPPDPLVASFNSWITHPPANVSRDFWMPDDSCRVC
                     YECDSHFTLFNRRHHCRFCGRVFCGKCTHNWVPSPSAQHSSDSSSSNIRLCNYCFKQW
                     LQGGLVDHDPSTSPPAASFISTRSSFTADTSSCLTFASALSSFQNNPIQNQLMESNLD
                     EYDALPIRTDEQLVDVGSHSLSPVGPFLNRGDEFTYPRHLSECDDPYYDELHLDDYGS
                     RKVHPDGESADTSFSLLQNSFDSRCSKQVEKKDDVNDENEASSSLYAAQDIDAEPFDF
                     ENNGELWLPPEPEDGEDEREALLYDDDDEDNNAADGVGEWGYGNSGSGELRNRDKSNE
                     EHKKAMKNVVDGHFRALVSQLLQVENLCAASDDEDDEKNNWLEIITSLSWEAASLLKP
                     DTSKGGGMDPGGYVKIKCLASGRPMDSMVVKGVVCKKNVAHRRMTSRIEKPRLLILGG
                     ALEYQRVSNLLSSFDTLLQQEMDHLKMAVAKIDAHQPDVLLVEKSVSRYAQEYLLAKD
                     ISLVLNMKRPLLERIARCTGAEIVPSVDHLSSQKLGYCDMFHVEKLLEEHGTAGQGGK
                     KLVKTLMYFEGCPKPFGCTILLRGASGDELKKVKHVVQYGVFAAYHLALETSFLADEG
                     ASLPELSLNSPLTVALPEKAASSIDRSISIIPGFTLPNNNMKDDTEQPRTDSLPMSDV
                     FSSIMNHKSQTTMLLPLVGSNNNNNIHNNQNRLPNSMLDTCVLPEAEAADVSNATGGG
                     DPSPISSPMVTAPTEMKDIPGAPTCNGFEHPRAQGNLLKCSQIGDRVESSSDQLLLDE
                     KKEDFPPTPSADHQSILVSLSSRCVWKGSVCERSHLFRIKYYGNFDKPLGRFLRDNLF
                     DQAYRCPSCEMPSEAHVQCYTHRQGTLTISVKKLTESAPLPGENDGKIWMWHRCLRCP
                     RVNGFPPATRRIVMSDAAWGLSFGKFLELSFSNHAAASRVANCGHSLHRDCLRFYGLG
                     KMVACFSYASISVHSVYLPPSKLVFSYEKQQWIQNEVNEVVSRAELLFSEILNALTQM
                     AEKKFGKSSANGSANMSQSRRQIADLEDMLQKEKAEFEESLEKVLNQNGPDILEINRL
                     RRQLLFQSYVWDHRLVYAASVNSSNSPRGDLPPDLNLDKSIKSPTVDSDIGETVDISK
                     KIQPEVMGGKEAEVVVVDSSPTTKEEEEENKSSLEENLDLVVGNDHGVHRAASEGQLS
                     VKASLSDTLDAAWTGNHPEPNDLDHPDNKGDDVDHYHNHTSSSLPSPAASSSSTTTKG
                     QGGSESIQEDSSSSSTTTWFSMPFLNLYRSLNKNLLPNSPKLEALNEYRAVYIPSYCE
                     SELHGGVHLLLPVGINDTVVPVYDDEPTSIIAYALLSPAYVSQMSGELNDGESSLFSS
                     QSADSAMFQSFRNSDNEAATLESVKSGGDESSLFSSLSGSRGSSSLVIDPLSYTKALH
                     ARVDFADDGPPLGKVKYSVTCYYAKRFEALRRICCPSEFDYIRSLSRCKKWGAQGGKS
                     NVFFAKTLDDRFIIKQVTKTELESFIKFAHAYFKYLSESIGSGSPTCLAKILGIYQVT
                     KQMKGGKEVKMDVLVMENLLFGRNLARLYDLKGSSRSRYNPDSSGSNKVLLDQNLIEA
                     MPTSPIFVGNKAKRLLERAVWNDTAFLASIDVMDYSLLVGVDEEKHELVLGIIDFMRQ
                     YTWDKHLETWVKASGILGGPKNASPTVISPKQYKKRFRKAMTTYFLMVPDQWSPPPPP
                     PPPPPAAAVPSKSQKDSTSEEGQGGTYF"
     misc_feature    454..654
                     /gene="LOC139839809"
                     /note="FYVE domain like superfamily; Region: FYVE_like_SF;
                     cl28890"
                     /db_xref="CDD:333710"
     misc_feature    order(520..537,550..552,631..633)
                     /gene="LOC139839809"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]; other site"
                     /db_xref="CDD:277264"
     misc_feature    1399..2226
                     /gene="LOC139839809"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; Region:
                     Fab1_TCP; cd03334"
                     /db_xref="CDD:239450"
     misc_feature    4705..5493
                     /gene="LOC139839809"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; Region: PIPKc_PIKfyve; cd17300"
                     /db_xref="CDD:340437"
     misc_feature    order(4846..4848,4873..4875,4879..4881,5056..5067,
                     5098..5100,5155..5157,5296..5298,5341..5346)
                     /gene="LOC139839809"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340437"
     polyA_site      6025
                     /gene="LOC139839809"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccctcacatc acacaaagtc tcgatcgatt catcgatctc aaaattcttc ccatcgatta
       61 aattcaacaa atgccaaatt gaattttcta tccgactcaa ttctaaataa ttgatttcca
      121 aagtgtcccg attggtctac tgactgcgca caaagaaaca aattaaatta agttaagttg
      181 ttgagctggt tgtcaccaat tgccatctgc ttgaggagga agagtaggga acttgttgga
      241 ttattattat gatcagccga caactgcaag ttttatatat ttatttgtaa aaaatataag
      301 ctatagacac tgatgagtag cagtattgta caatgactgg aattaccgga ttttatgcct
      361 atggatgcat cagacaaacc attacctcct gatccgttgg ttgcctcatt caattcatgg
      421 atcactcatc cgccagccaa tgtgtcgagg gacttttgga tgcccgatga tagttgcagg
      481 gtgtgttacg agtgtgattc ccattttact ttattcaacc gtagacatca ttgtagattt
      541 tgtggccgtg ttttttgtgg caagtgcacc cataattggg tcccttcgcc ttctgctcaa
      601 cactctagtg attcatcttc aagtaatatc agactctgta attactgctt caaacaatgg
      661 ctgcaaggtg gcttagttga tcatgacccc agcacttcac cacccgctgc cagtttcatc
      721 agcaccagat ccagcttcac tgctgacact agtagctgct taacttttgc atctgcgctc
      781 agctcttttc aaaataatcc tattcaaaat caacttatgg aatcaaatct agatgaatat
      841 gatgcactac caatcaggac cgatgaacaa ctagtcgatg tgggatctca ctctcttagc
      901 cctgttgggc cgttcctgaa caggggtgac gaatttactt atccaaggca tctttcggag
      961 tgtgatgatc cttattacga tgaattacat ttggatgact atgggtctcg caaagtacat
     1021 ccagatggag aatctgctga tacaagcttc tctttattgc agaacagttt cgattccagg
     1081 tgctccaaac aggttgagaa aaaagatgat gttaatgatg agaatgaagc atcatcgtct
     1141 ttatatgctg cacaagacat tgatgctgaa ccttttgatt ttgagaacaa tggagagcta
     1201 tggttgcctc cggaaccaga agacggagaa gatgaaaggg aagctctttt gtatgacgat
     1261 gatgatgaag ataataatgc agcagacggt gtgggagagt ggggatatgg gaattcagga
     1321 agtggagagt tgcgtaatag ggataagtca aatgaagagc acaagaaagc tatgaagaat
     1381 gtagttgatg gacactttag ggctctagta tctcagctgt tgcaggttga aaacctttgt
     1441 gcagcaagtg atgatgaaga tgatgaaaaa aataattggt tagaaataat cacatcactc
     1501 tcgtgggaag ctgcgtcatt acttaaacca gacacaagta aaggtggtgg gatggaccca
     1561 ggaggttatg tcaagatcaa atgcttagcc tctggacgtc ctatggacag tatggtggtg
     1621 aaaggagttg tatgcaaaaa aaatgtggct cacagaagga tgacatcaag aatagagaag
     1681 ccacgattgt taattcttgg gggggctctg gagtatcagc gtgtttctaa ccttctatcg
     1741 agttttgata ctttattgca acaggaaatg gatcatctga agatggctgt ggcaaagata
     1801 gatgcacacc agcctgatgt tcttctggta gaaaagtcag tttcacggta tgcacaggaa
     1861 tacctattgg cgaaagacat atcccttgtt ttgaatatga aaaggccgct tttagaacga
     1921 atagctcgct gtactggtgc tgagatagtt ccttcggtcg atcatctttc gtctcagaaa
     1981 ttaggatact gtgatatgtt tcatgttgaa aagcttctgg aagagcatgg aactgccggt
     2041 cagggaggca agaagttggt caagacattg atgtacttcg aaggctgtcc aaaaccattt
     2101 ggttgcacca tattactaag aggcgcgagc ggtgatgaac tgaagaaagt aaagcatgtg
     2161 gttcagtatg gagtttttgc tgcctatcat ttggccttgg agacctcttt tcttgctgat
     2221 gaaggagcct cgcttcctga actttcattg aattctccat taactgttgc acttcctgag
     2281 aaggcggcat caagtattga ccgctcaatt tcgataatac ctggttttac tctcccaaac
     2341 aacaacatga aagatgatac cgagcaacca aggactgaca gtcttcccat gtcagatgtg
     2401 ttctcttcaa taatgaacca caagtcacaa acaacaatgc tgttaccact tgttggatct
     2461 aataataata ataatattca caacaatcaa aaccgactcc caaattccat gcttgacact
     2521 tgtgtactcc cagaagcaga agcagcggat gtttcaaatg ctaccggtgg cggtgatccc
     2581 tctccaatta gttcacctat ggtgacggct ccaacagaaa tgaaggatat ccccggagca
     2641 ccaacttgta atggttttga gcaccctcgg gcacaaggaa acttgcttaa atgctcgcaa
     2701 attggtgata gagtggaaag ttcttctgat caactactgt tggatgaaaa gaaggaagat
     2761 tttcctccaa caccatcagc agatcatcag agcattctgg tatctttgtc atcccgctgc
     2821 gtgtggaagg ggtctgtttg tgaaaggtcc catctctttc gcataaaata ctatggaaat
     2881 tttgataagc cgttggggcg ctttcttcga gataatttgt tcgatcaagc ttatagatgc
     2941 ccttcatgtg agatgccttc ggaagcacat gtacagtgtt acacccatag gcagggtacg
     3001 ttaaccatat ctgtgaagaa gttgacggaa tcagcaccct taccagggga aaatgatggt
     3061 aagatctgga tgtggcatag gtgcttaagg tgtccacgtg ttaatggttt tcctcctgct
     3121 actcgaagga ttgtcatgtc ggatgctgcc tggggtttat cctttggcaa gtttttggag
     3181 cttagttttt ctaatcatgc tgccgccagc agagtcgcta actgtggtca ttctctacat
     3241 cgcgactgtc ttcgttttta tgggctgggc aaaatggttg cctgcttcag ctatgcatca
     3301 atcagcgtcc actcagttta ccttcctcct tcgaaacttg ttttcagtta tgagaagcaa
     3361 cagtggatac agaatgaagt aaacgaggtt gttagccggg ctgagctact attttcagaa
     3421 attcttaacg ccctcaccca gatggcagag aagaaatttg gaaagagttc agctaatggt
     3481 agtgcgaata tgtcacaatc aagacgtcaa atagcagatt tggaagatat gttacaaaag
     3541 gagaaggccg aatttgagga atcacttgaa aaagttttaa accaaaatgg tcctgatatt
     3601 ttggagatca accgattgag aagacagctg cttttccaat cttacgtgtg ggaccaccgg
     3661 ctggtgtatg cagctagtgt taatagtagc aacagccccc ggggtgattt gcctcctgac
     3721 ttaaacttgg ataaatcaat caagtcgcca acggttgatt cagatattgg tgagactgtt
     3781 gatatatcaa agaaaattca gcctgaagtg atggggggta aagaagctga agtggttgta
     3841 gtagattcaa gccctactac taaagaagaa gaagaagaaa acaagtctag ccttgaggag
     3901 aatcttgatc tggtagtagg caatgatcat ggtgtccata gggctgcttc tgaagggcag
     3961 ctgtcagtta aggcaagttt gtcagatacg ttagatgctg cctggactgg taatcaccca
     4021 gagccaaatg atttagatca tcctgataat aagggtgatg atgtagacca ttaccataac
     4081 catacatctt catcacttcc atctcctgcc gcctcctcat cgtctactac tactaagggc
     4141 caagggggtt ctgaaagtat acaagaagat tcatcatcat catcaacaac aacttggttt
     4201 agcatgccat ttttaaacct ctatcgttct ttgaataaaa acttgttacc aaattcccca
     4261 aagctggagg cactaaatga gtacagagcc gtctacatcc catcgtactg tgaatcagaa
     4321 ctccatggtg gagtgcacct ccttctacct gtgggtatta atgacaccgt tgttcctgtg
     4381 tatgatgacg agcccacaag tatcatagcc tatgcattgc tctcacctgc ttatgtttcc
     4441 cagatgtctg gagagctaaa tgacggggaa tcgtcgttat tttcgtctca atctgctgac
     4501 tcagcgatgt ttcagtcttt tagaaattca gataatgaag cagcaaccct ggaatctgtt
     4561 aaaagtggtg gagatgaaag tagtttattt tcctccttgt caggatctcg tgggtcctcc
     4621 tccctggtaa tagacccatt gtcatacaca aaggctttgc atgcgagagt tgattttgca
     4681 gacgatggac ctcctcttgg taaagttaag tacagtgtga cttgttacta cgctaagcgg
     4741 tttgaagcat taaggaggat atgttgcccc tctgaatttg attacataag gtctcttagt
     4801 cgttgtaaga agtggggtgc tcagggtggt aagagcaatg ttttctttgc aaaaacgtta
     4861 gatgaccggt ttataatcaa gcaggttaca aagacagaac tggagtcatt catcaagttt
     4921 gctcatgctt acttcaagta tctctctgaa tcaattggtt ctggaagccc tacttgcctt
     4981 gcaaaaatat taggcattta tcaggtgact aagcaaatga aagggggtaa ggaagtgaaa
     5041 atggatgtgt tggttatgga gaatcttttg tttggaagga atttggcacg gctttatgat
     5101 cttaaaggat cttcaaggtc acggtataat cccgattcga gtgggagcaa caaggttcta
     5161 cttgatcaga atttgatcga agccatgcca acctctccta tatttgttgg aaacaaagcc
     5221 aaaagattgc ttgaaagagc cgtctggaat gacactgctt ttcttgcttc aattgatgtg
     5281 atggattatt cgttgctggt tggggtagat gaagagaaac atgaactggt tttagggata
     5341 atcgacttca tgagacagta tacatgggac aagcatctag agacatgggt taaggcttct
     5401 gggattcttg gtgggcccaa gaatgcatct ccaactgtaa tttcacctaa acaatacaag
     5461 aagagattca ggaaagcaat gacaacatac tttctcatgg ttcccgatca atggtcccct
     5521 cctcctcctc ctcctcctcc tccccctgct gctgctgtac caagcaagtc ccaaaaagat
     5581 tctacttctg aggagggcca aggggggact tacttttgat gcccacagct tgctatatgg
     5641 tttgcttttt agtactactt tgattgattg acgattacaa attacaattc gggagcgaag
     5701 cctttttctt gttccagata tagtgttgtt tttacaattc attttcagtg tcaatattct
     5761 cgaaaaagat acgagtgtca tttgttgcaa ggtgaagaaa acaaggcatt gaggaacctt
     5821 tgctaaatga ttgggggtac ttataattag ctgacctacc caacaagaaa gttttgtaca
     5881 tgagtgtgtg tttttttaat atgtagattg atagtcaatt ctctattgtt gcttgtttga
     5941 aaagtgtatg tttgttattg aaggttcaat gctgtaacaa attataaatg ttaaactgct
     6001 gcccaaatat ttatttattt ataca
//
LOCUS       XM_071829975            1387 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839811), mRNA.
ACCESSION   XM_071829975
VERSION     XM_071829975.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1387
                     /gene="LOC139839811"
                     /note="uncharacterized LOC139839811; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139839811"
     CDS             31..1230
                     /gene="LOC139839811"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686076.1"
                     /db_xref="GeneID:139839811"
                     /translation="MWWRSASFIVDDRNRNLQQPESPHLLSPPYPSSSSSSASVMTEI
                     PLQNPNNNNISAYYQTRAAHHGVVTSDWLAQAQAAVGRSDVNSSSVTLSSSDGSLFSV
                     IDEFNNWRKQPDLAEAVAAIRALASVIRSSNATTMVELLTELKSASDSLKSWDTTSIS
                     LAAGCDLFMRYLTRTSAVDYEDFNSAKSRFLERAEKFGDISHKARKIIAMLGQDFIFN
                     GCTILVHGFSRVVLEILKTAAETKKVFRVLCTEGRPDRTGLRFSNELAKLDVPVKLLI
                     DSAVAYIMDEVDMVFVGADGVVESGGIINMMGTYQIALVAKSMDKPVYVAAESYKFAR
                     MYPLDQKDMVPALRPVDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLTPSVVSD
                     ELIQLYL"
     misc_feature    364..1191
                     /gene="LOC139839811"
                     /note="Initiation factor 2 subunit family; Region: IF-2B;
                     pfam01008"
                     /db_xref="CDD:395798"
     polyA_site      1387
                     /gene="LOC139839811"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aattacggag taaaataatt aaagggaggt atgtggtgga gatctgcttc cttcattgtc
       61 gacgacagga accgcaatct ccaacaaccc gaaagccctc atcttctatc tcctccctat
      121 ccttcttctt catcatcatc agcctctgtc atgactgaaa tcccccttca aaaccctaat
      181 aacaataata tatccgctta ctatcagaca agagctgctc accatggagt cgtaaccagc
      241 gattggttag ctcaggctca agctgccgtc ggccgttccg atgtcaattc atcatcagtc
      301 actttatcat catccgatgg ttccttgttc agtgtgattg atgagtttaa taattggagg
      361 aaacaacctg atcttgcaga agcagtggcg gctattaggg cacttgcttc tgttattagg
      421 tcaagtaatg caactactat ggttgagctt ctaaccgaac tcaaatcagc ttctgattct
      481 ctcaagtcat gggacacaac ttcgatctca ttggcagctg gttgtgatct ttttatgcgc
      541 tacttaacta gaacttcggc cgttgattat gaggacttca attcagctaa gtcccgcttc
      601 ctcgaacgtg cagagaaatt tggggatatc tctcataagg ctcggaaaat cattgcaatg
      661 ttaggtcaag attttatttt taatgggtgt acgatcctgg tgcatggttt ttctagagtg
      721 gttttggaaa ttttgaagac tgcagccgaa accaagaaag tgtttcgagt tctctgcaca
      781 gagggacggc cagacaggac ggggcttaga ttttcaaatg aactggcaaa gcttgatgta
      841 cctgtgaagc tgttgatcga ttcagctgta gcatacatta tggatgaagt tgacatggta
      901 tttgttggtg ctgatggagt ggttgaaagt ggaggtataa ttaacatgat gggaacttat
      961 cagattgcat tggtggctaa atccatggac aaacctgttt atgttgccgc tgagagctac
     1021 aagtttgctc gcatgtatcc tttggatcag aaggacatgg tacctgcgtt acggcctgtt
     1081 gattttgggg tccccattcc atcgaaagtc gaggttgaaa aatctgctag ggattacacc
     1141 ccacctcaat atctgaccct acttttcact gatttgggcg tgttgacacc atctgttgtt
     1201 agtgatgagc ttattcagct ttacttgtaa cctttttgca atggcagatt atttacgttt
     1261 tggtgttttt tgttgacaag gagaaagaat gcattgtttt gatacaatct tgttttagtt
     1321 atagtattaa gttaacctcc ttgaatctac ttcttgttca tctgtctggt taactggttt
     1381 ggtttca
//
LOCUS       XR_011757078             258 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839812), ncRNA.
ACCESSION   XR_011757078
VERSION     XR_011757078.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..258
                     /gene="LOC139839812"
                     /note="uncharacterized LOC139839812; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839812"
     ncRNA           1..258
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839812"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839812"
ORIGIN      
        1 catttgtaat tggttatctg caaccactca caggcggaaa caatacaaac aaggtaccga
       61 atcaagttaa ttcataaagc aatcacaagg agaatgccaa agtaaactat ggagctatga
      121 atgggtttgc tagagctttg aatcatgttt catcaaggta agctatgaat gggattgaca
      181 cagatattat taatgttttt tttatagatt ttgtattaac atcaccaatc aatggtattg
      241 aaaggtactt ctaacatt
//
LOCUS       XR_011757079            2824 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839813), transcript variant X1, ncRNA.
ACCESSION   XR_011757079
VERSION     XR_011757079.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2824
                     /gene="LOC139839813"
                     /note="uncharacterized LOC139839813; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839813"
     ncRNA           1..2824
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839813"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839813"
ORIGIN      
        1 ttgcatatga ttatgttacg gtgctaatgc aactgttcat tgtgatatct gtggaggtta
       61 tgttgccttt tgttcactca ggtgagtttt gatccccaag tattaacttt tcttgctcaa
      121 cgaattatgg aaatttgtcg gtaagagaag ttaatttcct tattatttaa gtatttcatt
      181 ttccataagt gatgacaata agggtgggtt aaataaaggg gtcaaaacag gctttgggtt
      241 gaaactggtc atttttgaca caagttaaac gggccaagcc aggttgaata aatctgccaa
      301 cattttttcc ggcccatttt caggaaaagc taattattag taaccaactt gtaaagtata
      361 ataaaacagt attattacaa ttattatata ctaagtcacg gtaaaatgca acccagattg
      421 acccatttat aagtaaatca gttgaaatgg ccacctattt gatagaactt tcatgtcttg
      481 ctttagtcaa tcttgattct gatgctacaa aacctcagaa tgagataatt cggcagaagt
      541 ctgctatagc tgattattat gacgttggta ttctctgaat atacaagtga tttcagacaa
      601 tattttgcta aaggagttgg gtggtctact tcatttgaac atattatcag atgaaaatga
      661 ataatggaaa attgtcgtaa gagaagttta ttttcttgct cattaatgat ttcaatttct
      721 gaagttatga caatagacaa gttactatgt gtatagcaaa tgatccatat gccagaggtg
      781 ttgtcgttcg ttgtccttga tcatcatgta cagtactaat gactcaacta tccgtcctga
      841 tattcgtaga gcttatgttg cctttgcttc tcaggtgaaa gtttttttcc ttctacatta
      901 cggccatccg aaatgatcat ctttgaccat aatccgaacc gaccattttg ttactgctca
      961 actttaagaa tgatagccta tctaagtcaa taattgcctc aattgtggat gatctttcga
     1021 ggtatgattt aactgttaac agtttcaaag agatgatcag aggcttctca aatgtaatat
     1081 tacagccaaa aggttatggc catgatacca aggctgatac agtacatatg cttcctttac
     1141 ccgggaatca tattaaggtt ctcaggtgat gggaaacgaa ctttttagtc aatcagttct
     1201 aatgactcaa ctgttcatcg tgatatccgt ggaagttatg ttgcctttgc ttatcatgca
     1261 tctcaggtga tgcgaagcgg actgttttgg tcaatcttga ttatgatgct ataaaaccat
     1321 agaatgagat gatttggcag aagtctgcta tagttgatta ttctggtttg tcattatata
     1381 caagtgattt caggtttgtc gttatatagg tctcatttat atttcttata atcgttcctt
     1441 gtaaaacttg catatgattc tgtacagaac taatgactta attgttcatc cggatttaac
     1501 tgcctattac gtggatctgt tgcagatttt gattggttcc ctttttgatg ttatgggtca
     1561 tatgatgcaa agtacaattg ttactcgtac attgtggtcg ttatcagtgc ttgtccaacg
     1621 tatattttat tttcaagccc tgtattacaa ggcaaagttc tctgatctct aattgtaccc
     1681 aatgcagatg atttcagctg aaaatttggt gaagatttca acatatgatc gatcatcagg
     1741 ataggctttc gtcaaggaca actggtgtgt ttgttaagcc ccgaaacatt caactgtaga
     1801 tggaatgaca accgttcccg gaaagagttg agaggacaat attttggtga aagagttggc
     1861 ttttggtgta catcatttgg aaatattatg agatgctggt ctcgcattta tccatgtgct
     1921 accaactttt caatttggag atcttgacga tgagaatgaa aatcgaaatt tgtaggctgt
     1981 taagtgagct tgatttacct ctcacgtcaa acaggtgggg ttggcgctgc cggaattgat
     2041 ggtttcatta ctggagtaca ttataacttg taaaacaagt ctcttctttg tgggtttcga
     2101 cgttggtttc caaattctgt ttggaattga gggttcaata tcgggttata tcatgacttg
     2161 caattattat gtttagtctt atgtgtcttc agacctgaac tttctttttt ttataaagtt
     2221 tttctaattg tgttgaacga gatatcaaat ttgaatcact ggttttctta ttttcaggtt
     2281 tgggttgacg gcagtgtgcc taatatccaa tcagtatttc acacaaattg gtagggtagg
     2341 tgtcgtcgaa gctagttaag gatgaaaaga atgagaactc agaatacagt taatagcttg
     2401 ttttacaagg tcaaaacaaa atttgcgttc ctgttagagg ctgcatgatg cacgtgatgg
     2461 taatggttga atctgggctc tgacttaaat ggctcacttt ttagtatggg tcaaaacagt
     2521 tcagattgat tggccgggtt agtctgtact ggttgaatct gggctctgtt tgatattcgt
     2581 gatagtatta tctagtattc tcttttatta gacagccttc atgcctctaa tcaccgtatc
     2641 tgttttaaag gccctgctgt attaagatgg ccacgaaggt gttccaggtt tatcttaact
     2701 tgaccgtgat gggaagctaa cctttttagt caatcttgat tctgatgcta taaaacctca
     2761 aaaatgggat tgtttgttat aggcgatgtc tgatatagct gaactacaca tacaagtgat
     2821 ttca
//
LOCUS       XR_011757080            2901 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839813), transcript variant X2, ncRNA.
ACCESSION   XR_011757080
VERSION     XR_011757080.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2901
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2901
                     /gene="LOC139839813"
                     /note="uncharacterized LOC139839813; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839813"
     ncRNA           1..2901
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839813"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839813"
ORIGIN      
        1 gctctttctg ccatacattg ttatttttat agattctcgg gtgatgggaa gcgaataatt
       61 ttagtcaatc ttgaatctga tgctataaat cctcaaaaat gggatgattt ggtagataag
      121 aagtctgata tagctgatta ttatacaagt gatttcaggt gagttttgat ccccaagtat
      181 taacttttct tgctcaacga attatggaaa tttgtcggta agagaagtta atttccttat
      241 tatttaagta tttcattttc cataagtgat gacaataagg gtgggttaaa taaaggggtc
      301 aaaacaggct ttgggttgaa actggtcatt tttgacacaa gttaaacggg ccaagccagg
      361 ttgaataaat ctgccaacat tttttccggc ccattttcag gaaaagctaa ttattagtaa
      421 ccaacttgta aagtataata aaacagtatt attacaatta ttatatacta agtcacggta
      481 aaatgcaacc cagattgacc catttataag taaatcagtt gaaatggcca cctatttgat
      541 agaactttca tgtcttgctt tagtcaatct tgattctgat gctacaaaac ctcagaatga
      601 gataattcgg cagaagtctg ctatagctga ttattatgac gttggtattc tctgaatata
      661 caagtgattt cagacaatat tttgctaaag gagttgggtg gtctacttca tttgaacata
      721 ttatcagatg aaaatgaata atggaaaatt gtcgtaagag aagtttattt tcttgctcat
      781 taatgatttc aatttctgaa gttatgacaa tagacaagtt actatgtgta tagcaaatga
      841 tccatatgcc agaggtgttg tcgttcgttg tccttgatca tcatgtacag tactaatgac
      901 tcaactatcc gtcctgatat tcgtagagct tatgttgcct ttgcttctca ggtgaaagtt
      961 tttttccttc tacattacgg ccatccgaaa tgatcatctt tgaccataat ccgaaccgac
     1021 cattttgtta ctgctcaact ttaagaatga tagcctatct aagtcaataa ttgcctcaat
     1081 tgtggatgat ctttcgaggt atgatttaac tgttaacagt ttcaaagaga tgatcagagg
     1141 cttctcaaat gtaatattac agccaaaagg ttatggccat gataccaagg ctgatacagt
     1201 acatatgctt cctttacccg ggaatcatat taaggttctc aggtgatggg aaacgaactt
     1261 tttagtcaat cagttctaat gactcaactg ttcatcgtga tatccgtgga agttatgttg
     1321 cctttgctta tcatgcatct caggtgatgc gaagcggact gttttggtca atcttgatta
     1381 tgatgctata aaaccataga atgagatgat ttggcagaag tctgctatag ttgattattc
     1441 tggtttgtca ttatatacaa gtgatttcag gtttgtcgtt atataggtct catttatatt
     1501 tcttataatc gttccttgta aaacttgcat atgattctgt acagaactaa tgacttaatt
     1561 gttcatccgg atttaactgc ctattacgtg gatctgttgc agattttgat tggttccctt
     1621 tttgatgtta tgggtcatat gatgcaaagt acaattgtta ctcgtacatt gtggtcgtta
     1681 tcagtgcttg tccaacgtat attttatttt caagccctgt attacaaggc aaagttctct
     1741 gatctctaat tgtacccaat gcagatgatt tcagctgaaa atttggtgaa gatttcaaca
     1801 tatgatcgat catcaggata ggctttcgtc aaggacaact ggtgtgtttg ttaagccccg
     1861 aaacattcaa ctgtagatgg aatgacaacc gttcccggaa agagttgaga ggacaatatt
     1921 ttggtgaaag agttggcttt tggtgtacat catttggaaa tattatgaga tgctggtctc
     1981 gcatttatcc atgtgctacc aacttttcaa tttggagatc ttgacgatga gaatgaaaat
     2041 cgaaatttgt aggctgttaa gtgagcttga tttacctctc acgtcaaaca ggtggggttg
     2101 gcgctgccgg aattgatggt ttcattactg gagtacatta taacttgtaa aacaagtctc
     2161 ttctttgtgg gtttcgacgt tggtttccaa attctgtttg gaattgaggg ttcaatatcg
     2221 ggttatatca tgacttgcaa ttattatgtt tagtcttatg tgtcttcaga cctgaacttt
     2281 ctttttttta taaagttttt ctaattgtgt tgaacgagat atcaaatttg aatcactggt
     2341 tttcttattt tcaggtttgg gttgacggca gtgtgcctaa tatccaatca gtatttcaca
     2401 caaattggta gggtaggtgt cgtcgaagct agttaaggat gaaaagaatg agaactcaga
     2461 atacagttaa tagcttgttt tacaaggtca aaacaaaatt tgcgttcctg ttagaggctg
     2521 catgatgcac gtgatggtaa tggttgaatc tgggctctga cttaaatggc tcacttttta
     2581 gtatgggtca aaacagttca gattgattgg ccgggttagt ctgtactggt tgaatctggg
     2641 ctctgtttga tattcgtgat agtattatct agtattctct tttattagac agccttcatg
     2701 cctctaatca ccgtatctgt tttaaaggcc ctgctgtatt aagatggcca cgaaggtgtt
     2761 ccaggtttat cttaacttga ccgtgatggg aagctaacct ttttagtcaa tcttgattct
     2821 gatgctataa aacctcaaaa atgggattgt ttgttatagg cgatgtctga tatagctgaa
     2881 ctacacatac aagtgatttc a
//
LOCUS       XR_011757081            2478 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839813), transcript variant X3, ncRNA.
ACCESSION   XR_011757081
VERSION     XR_011757081.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2478
                     /gene="LOC139839813"
                     /note="uncharacterized LOC139839813; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839813"
     ncRNA           1..2478
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839813"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839813"
ORIGIN      
        1 ttgcatatga ttatgttacg gtgctaatgc aactgttcat tgtgatatct gtggaggtta
       61 tgttgccttt tgttcactca ggtgagtttt gatccccaag tattaacttt tcttgctcaa
      121 cgaattatgg aaatttgtcg tcaatcttga ttctgatgct acaaaacctc agaatgagat
      181 aattcggcag aagtctgcta tagctgatta ttatgacgtt ggtattctct gaatatacaa
      241 gtgatttcag acaatatttt gctaaaggag ttgggtggtc tacttcattt gaacatatta
      301 tcagatgaaa atgaataatg gaaaattgtc gtaagagaag tttattttct tgctcattaa
      361 tgatttcaat ttctgaagtt atgacaatag acaagttact atgtgtatag caaatgatcc
      421 atatgccaga ggtgttgtcg ttcgttgtcc ttgatcatca tgtacagtac taatgactca
      481 actatccgtc ctgatattcg tagagcttat gttgcctttg cttctcaggt gaaagttttt
      541 ttccttctac attacggcca tccgaaatga tcatctttga ccataatccg aaccgaccat
      601 tttgttactg ctcaacttta agaatgatag cctatctaag tcaataattg cctcaattgt
      661 ggatgatctt tcgaggtatg atttaactgt taacagtttc aaagagatga tcagaggctt
      721 ctcaaatgta atattacagc caaaaggtta tggccatgat accaaggctg atacagtaca
      781 tatgcttcct ttacccggga atcatattaa ggttctcagg tgatgggaaa cgaacttttt
      841 agtcaatcag ttctaatgac tcaactgttc atcgtgatat ccgtggaagt tatgttgcct
      901 ttgcttatca tgcatctcag gtgatgcgaa gcggactgtt ttggtcaatc ttgattatga
      961 tgctataaaa ccatagaatg agatgatttg gcagaagtct gctatagttg attattctgg
     1021 tttgtcatta tatacaagtg atttcaggtt tgtcgttata taggtctcat ttatatttct
     1081 tataatcgtt ccttgtaaaa cttgcatatg attctgtaca gaactaatga cttaattgtt
     1141 catccggatt taactgccta ttacgtggat ctgttgcaga ttttgattgg ttcccttttt
     1201 gatgttatgg gtcatatgat gcaaagtaca attgttactc gtacattgtg gtcgttatca
     1261 gtgcttgtcc aacgtatatt ttattttcaa gccctgtatt acaaggcaaa gttctctgat
     1321 ctctaattgt acccaatgca gatgatttca gctgaaaatt tggtgaagat ttcaacatat
     1381 gatcgatcat caggataggc tttcgtcaag gacaactggt gtgtttgtta agccccgaaa
     1441 cattcaactg tagatggaat gacaaccgtt cccggaaaga gttgagagga caatattttg
     1501 gtgaaagagt tggcttttgg tgtacatcat ttggaaatat tatgagatgc tggtctcgca
     1561 tttatccatg tgctaccaac ttttcaattt ggagatcttg acgatgagaa tgaaaatcga
     1621 aatttgtagg ctgttaagtg agcttgattt acctctcacg tcaaacaggt ggggttggcg
     1681 ctgccggaat tgatggtttc attactggag tacattataa cttgtaaaac aagtctcttc
     1741 tttgtgggtt tcgacgttgg tttccaaatt ctgtttggaa ttgagggttc aatatcgggt
     1801 tatatcatga cttgcaatta ttatgtttag tcttatgtgt cttcagacct gaactttctt
     1861 ttttttataa agtttttcta attgtgttga acgagatatc aaatttgaat cactggtttt
     1921 cttattttca ggtttgggtt gacggcagtg tgcctaatat ccaatcagta tttcacacaa
     1981 attggtaggg taggtgtcgt cgaagctagt taaggatgaa aagaatgaga actcagaata
     2041 cagttaatag cttgttttac aaggtcaaaa caaaatttgc gttcctgtta gaggctgcat
     2101 gatgcacgtg atggtaatgg ttgaatctgg gctctgactt aaatggctca ctttttagta
     2161 tgggtcaaaa cagttcagat tgattggccg ggttagtctg tactggttga atctgggctc
     2221 tgtttgatat tcgtgatagt attatctagt attctctttt attagacagc cttcatgcct
     2281 ctaatcaccg tatctgtttt aaaggccctg ctgtattaag atggccacga aggtgttcca
     2341 ggtttatctt aacttgaccg tgatgggaag ctaacctttt tagtcaatct tgattctgat
     2401 gctataaaac ctcaaaaatg ggattgtttg ttataggcga tgtctgatat agctgaacta
     2461 cacatacaag tgatttca
//
LOCUS       XR_011757082            2616 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839813), transcript variant X4, ncRNA.
ACCESSION   XR_011757082
VERSION     XR_011757082.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2616
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2616
                     /gene="LOC139839813"
                     /note="uncharacterized LOC139839813; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839813"
     ncRNA           1..2616
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839813"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839813"
ORIGIN      
        1 ttgcatatga ttatgttacg gtgctaatgc aactgttcat tgtgatatct gtggaggtta
       61 tgttgccttt tgttcactca ggtgagtttt gatccccaag tattaacttt tcttgctcaa
      121 cgaattatgg aaatttgtcg gtaagagaag ttaatttcct tattatttaa gtatttcatt
      181 ttccataagt gatgacaata agggtgggtt aaataaaggg gtcaaaacag gctttgggtt
      241 gaaactggtc atttttgaca caagttaaac gggccaagcc aggttgaata aatctgccaa
      301 cattttttcc ggcccatttt caggaaaagc taattattag taaccaactt gtaaagtata
      361 ataaaacagt attattacaa ttattatata ctaagtcacg gtaaaatgca acccagattg
      421 acccatttat aagtaaatca gttgaaatgg ccacctattt gatagaactt tcatgtcttg
      481 ctttagtcaa tcttgattct gatgctacaa aacctcagaa tgagataatt cggcagaagt
      541 ctgctatagc tgattattat gacgttggta ttctctgaat atacaagtga tttcagacaa
      601 tattttgcta aaggagttgg gtggtctact tcatttgaac atattatcag atgaaaatga
      661 ataatggaaa attgtcgtaa gagaagttta ttttcttgct cattaatgat ttcaatttct
      721 gaagttatga caatagacaa gttactatgt gtatagcaaa tgatccatat gccagaggtg
      781 ttgtcgttcg ttgtccttga tcatcatgta cagtactaat gactcaacta tccgtcctga
      841 tattcgtaga gcttatgttg cctttgcttc tcaggtgaaa gtttttttcc ttctacatta
      901 cggccatccg aaatgatcat ctttgaccat aatccgaacc gaccattttg ttactgctca
      961 actttaagaa tgatagccta tctaagtcaa taattgcctc aattgtggat gatctttcga
     1021 ggtatgattt aactgttaac agtttcaaag agatgatcag aggcttctca aatgtaatat
     1081 tacagccaaa aggttatggc catgatacca aggctgatac agtacatatg cttcctttac
     1141 ccgggaatca tattaaggtt ctcaggtgat gggaaacgaa ctttttagtc aatcagttct
     1201 aatgactcaa ctgttcatcg tgatatccgt ggaagttatg ttgcctttgc ttatcatgca
     1261 tctcaggtga tgcgaagcgg actgttttgg tcaatcttga ttatgatgct ataaaaccat
     1321 agaatgagat gatttggcag aagtctgcta tagttgatta ttctggtttg tcattatata
     1381 caagtgattt caggtttgtc gttatatagg tctcatttat atttcttata atcgttcctt
     1441 gtaaaacttg catatgattc tgtacagaac taatgactta attgttcatc cggatttaac
     1501 tgcctattac gtggatctgt tgcagatttt gattggttcc ctttttgatg ttatgggtca
     1561 tatgatgcaa agtacaattg ttactcgtac attgtggtcg ttatcagtgc ttgtccaacg
     1621 tatattttat tttcaagccc tgtattacaa ggcaaagttc tctgatctct aattgtaccc
     1681 aatgcagatg atttcagctg aaaatttggt gaagatttca acatatgatc gatcatcagg
     1741 ataggctttc gtcaaggaca actggtgtgt ttgttaagcc ccgaaacatt caactgtaga
     1801 tggaatgaca accgttcccg gaaagagttg agaggacaat attttggtga aagagttggc
     1861 ttttggtgta catcatttgg aaatattatg agatgctggt ctcgcattta tccatgtgct
     1921 accaactttt caatttggag atcttgacga tgagaatgaa aatcgaaatt tgtaggctgt
     1981 taagtgagct tgatttacct ctcacgtcaa acaggtgggg ttggcgctgc cggaattgat
     2041 ggtttcatta ctggagtaca ttataacttg tttgggttga cggcagtgtg cctaatatcc
     2101 aatcagtatt tcacacaaat tggtagggta ggtgtcgtcg aagctagtta aggatgaaaa
     2161 gaatgagaac tcagaataca gttaatagct tgttttacaa ggtcaaaaca aaatttgcgt
     2221 tcctgttaga ggctgcatga tgcacgtgat ggtaatggtt gaatctgggc tctgacttaa
     2281 atggctcact ttttagtatg ggtcaaaaca gttcagattg attggccggg ttagtctgta
     2341 ctggttgaat ctgggctctg tttgatattc gtgatagtat tatctagtat tctcttttat
     2401 tagacagcct tcatgcctct aatcaccgta tctgttttaa aggccctgct gtattaagat
     2461 ggccacgaag gtgttccagg tttatcttaa cttgaccgtg atgggaagct aaccttttta
     2521 gtcaatcttg attctgatgc tataaaacct caaaaatggg attgtttgtt ataggcgatg
     2581 tctgatatag ctgaactaca catacaagtg atttca
//
LOCUS       XR_011757083            2561 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839813), transcript variant X5, ncRNA.
ACCESSION   XR_011757083
VERSION     XR_011757083.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2561
                     /gene="LOC139839813"
                     /note="uncharacterized LOC139839813; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839813"
     ncRNA           1..2561
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839813"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839813"
ORIGIN      
        1 ttgcatatga ttatgttacg gtgctaatgc aactgttcat tgtgatatct gtggaggtta
       61 tgttgccttt tgttcactca ggtgagtttt gatccccaag tattaacttt tcttgctcaa
      121 cgaattatgg aaatttgtcg gtaagagaag ttaatttcct tattatttaa gtatttcatt
      181 ttccataagt gatgacaata agggtgggtt aaataaaggg gtcaaaacag gctttgggtt
      241 gaaactggtc atttttgaca caagttaaac gggccaagcc aggttgaata aatctgccaa
      301 cattttttcc ggcccatttt caggaaaagc taattattag taaccaactt gtaaagtata
      361 ataaaacagt attattacaa ttattatata ctaagtcacg gtaaaatgca acccagattg
      421 acccatttat aagtaaatca gttgaaatgg ccacctattt gatagaactt tcatgtcttg
      481 ctttagtcaa tcttgattct gatgctacaa aacctcagaa tgagataatt cggcagaagt
      541 ctgctatagc tgattattat gacgttggta ttctctgaat atacaagtga tttcagacaa
      601 tattttgcta aaggagttgg gtggtctact tcatttgaac atattatcag atgaaaatga
      661 ataatggaaa attgtcgtaa gagaagttta ttttcttgct cattaatgat ttcaatttct
      721 gaagttatga caatagacaa gttactatgt gtatagcaaa tgatccatat gccagaggtg
      781 ttgtcgttcg ttgtccttga tcatcatgta cagtactaat gactcaacta tccgtcctga
      841 tattcgtaga gcttatgttg cctttgcttc tcaggtgaaa gtttttttcc ttctacatta
      901 cggccatccg aaatgatcat ctttgaccat aatccgaacc gaccattttg ttactgctca
      961 actttaagaa tgatagccta tctaagtcaa taattgcctc aattgtggat gatctttcga
     1021 ggtatgattt aactgttaac agtttcaaag agatgatcag aggcttctca aatgtaatat
     1081 tacagccaaa aggttatggc catgatacca aggctgatac agtacatatg cttcctttac
     1141 ccgggaatca tattaaggtt ctcaggtgat gggaaacgaa ctttttagtc aatcagttct
     1201 aatgactcaa ctgttcatcg tgatatccgt ggaagttatg ttgcctttgc ttatcatgca
     1261 tctcaggtga tgcgaagcgg actgttttgg tcaatcttga ttatgatgct ataaaaccat
     1321 agaatgagat gatttggcag aagtctgcta tagttgatta ttctggtttg tcattatata
     1381 caagtgattt caggtttgtc gttatatagg tctcatttat atttcttata atcgttcctt
     1441 gtaaaacttg catatgattc tgtacagaac taatgactta attgttcatc cggatttaac
     1501 tgcctattac gtggatctgt tgcagatttt gattggttcc ctttttgatg ttatgggtca
     1561 tatgatgcaa agtacaattg ttactcgtac attgtggtcg ttatcagtgc ttgtccaacg
     1621 tatattttat tttcaagccc tgtattacaa ggcaaagttc tctgatctct aattgtaccc
     1681 aatgcagatg atttcagctg aaaatttggt gaagatttca acatatgatc gatcatcagg
     1741 ataggctttc gtcaaggaca actggtgtgt ttgttaagcc ccgaaacatt caactgtaga
     1801 tggaatgaca accgttcccg gaaagagttg agaggacaat attttggtga aagagttggc
     1861 ttttggtgta catcatttgg aaatattatg agatgctggt ctcgcattta tccatgtgct
     1921 accaactttt caatttggag atcttgacga tgagaatgaa aatcgaaatt tgtaggctgt
     1981 taagtgagct tgatttacct ctcacgtcaa acaggtttgg gttgacggca gtgtgcctaa
     2041 tatccaatca gtatttcaca caaattggta gggtaggtgt cgtcgaagct agttaaggat
     2101 gaaaagaatg agaactcaga atacagttaa tagcttgttt tacaaggtca aaacaaaatt
     2161 tgcgttcctg ttagaggctg catgatgcac gtgatggtaa tggttgaatc tgggctctga
     2221 cttaaatggc tcacttttta gtatgggtca aaacagttca gattgattgg ccgggttagt
     2281 ctgtactggt tgaatctggg ctctgtttga tattcgtgat agtattatct agtattctct
     2341 tttattagac agccttcatg cctctaatca ccgtatctgt tttaaaggcc ctgctgtatt
     2401 aagatggcca cgaaggtgtt ccaggtttat cttaacttga ccgtgatggg aagctaacct
     2461 ttttagtcaa tcttgattct gatgctataa aacctcaaaa atgggattgt ttgttatagg
     2521 cgatgtctga tatagctgaa ctacacatac aagtgatttc a
//
LOCUS       XM_071829977            3011 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphoinositide phosphatase
            SAC2-like (LOC139839814), transcript variant X1, mRNA.
ACCESSION   XM_071829977
VERSION     XM_071829977.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3011
                     /gene="LOC139839814"
                     /note="phosphoinositide phosphatase SAC2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839814"
     CDS             300..2894
                     /gene="LOC139839814"
                     /codon_start=1
                     /product="phosphoinositide phosphatase SAC2-like isoform
                     X1"
                     /protein_id="XP_071686078.1"
                     /db_xref="GeneID:139839814"
                     /translation="MAAASAWIRDMPKLENAYLHKFKLYETISNYYMIGHNKNRSIYR
                     VLKIDRSEAAELNITEDSTVYTERESNELIRRIDYGNKSTGGFKSKTVCYGVVGFIKF
                     LGPYYMLLITKRKKIGVICGHAVYAIMESEIFPISNSTVAPNMDYSKNENRYLKLLRS
                     VDLRKDFYFSYTYHVMHSLQKNLSTREAGQDIYETMFVWNEFLTSAIRNQLNNNLWTV
                     PLVYGHFKQVKLLLSEKEFMLTIIARRSRHYAGTRYLKRGVNEDGCVANDVETEQLVF
                     EDNVPEGYPVQISSIVQNRGSIPLFWSQETSRLNMKPDIILSKQDNNYEATRLHFQNL
                     YERYGNPIIILNLVKTTEKKPRESILRVEFANAIESINKGLPRESQLKFLHWDLNKHS
                     RNRSSDVLVLLGKVATYALNLTGFFYCQVTSRSKSQELMDHVVDKSGGDHCLQNHASE
                     KSDGGVFNDILTHDSSCCVESSKGGGMKAPQYQTGVLRTNCIDCLDRTNVAQYAYGWA
                     ALGHQLHALGYIDTPSIELDSSLADDLMSVYERMGDTLALQYGGSAAHNKIFSQRRGQ
                     WKAATQSQEFFRTLQRYYSNAYMDAQKQDAINLFLGHYRPRHGTPALWELDSNRHYYV
                     GSRGLNSYEENTRGVPFSRSLSDGNIMSDGRAEIDIGHRNEGECENSYSREGEAAQED
                     SRNGGLSESSPEISTCERDSSYPRYRYVMPAAMSRRRHLYLDTHAEDYPNSDCIFYYN
                     NKRSDSFNCSNFIDVDWISSSGNSCEGEAYERSLSPFGGQSSENVVNGGPVPCDSELC
                     LHPKGEDDEAVGKLRGGEEYPDEFVEWVMDGGMFFRRTETDRRNLDPCGWSWSMDWNK
                     QIDWYSWI"
     misc_feature    579..1478
                     /gene="LOC139839814"
                     /note="SacI homology domain; Region: Syja_N; pfam02383"
                     /db_xref="CDD:460545"
     polyA_site      3011
                     /gene="LOC139839814"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgttctttt ggatacatac agatacagaa tacggataca gtcgcgggac atctctgaaa
       61 tttttattaa ttaattttgt ttttgttttt gtatccatct tcaccggatc atcttcatca
      121 ccgccctctg atctacgacc acctaaactt gcttactttc taaacaaaat aatcaaaagt
      181 tgtcaatttg aacttgttca ggatttcagg tttccggcgg tagagttgac cggcgatctg
      241 cttgttttaa ctgatagagc ccgggcttga gaggctcggg cttgttctga aaaacaaaca
      301 tggcggctgc ttcagcgtgg atcagagata tgcctaaact tgagaatgcc tatctccaca
      361 aattcaaact ttacgagact atctcgaact attatatgat tggacacaat aagaatagat
      421 caatttatag agttttaaag atcgacagat cagaagctgc cgagctaaac attaccgaag
      481 attctaccgt gtacacagaa agggaatcca acgaattgat acgtcgtatt gattatggga
      541 ataagtccac agggggattt aagtcgaaaa ccgtctgtta tggcgttgtc gggttcataa
      601 agtttttggg accttattac atgctgctga ttactaaaag aaagaaaatt ggtgtaattt
      661 gcgggcatgc agtatatgcg attatggaaa gcgagatctt cccaatttcc aattctactg
      721 ttgcacccaa tatggattat tctaagaacg agaacagata cttgaagctc ctccgctcgg
      781 tggatctcag aaaggacttc tatttcagtt acacatatca tgtgatgcat agtcttcaaa
      841 agaacttgtc tactcgagaa gcaggccagg atatttatga aacaatgttt gtctggaacg
      901 agtttttgac atctgcaatt cgcaatcagt tgaacaataa cctttggaca gtgccactag
      961 tttatggcca cttcaagcag gtcaaacttt tattatctga aaaggaattc atgttgacta
     1021 tcattgctag gcgatctcgt cattacgccg gaaccagata cttgaaaaga ggggttaatg
     1081 aggatgggtg cgtagccaat gatgttgaaa cagaacagtt agtgtttgaa gataatgttc
     1141 cagaaggata tcctgtgcaa ataagttcca ttgttcaaaa tcggggatca atacccctct
     1201 tctggtcaca ggaaacttca cgattgaata tgaagcctga tatcatcttg tcaaaacaag
     1261 acaataatta tgaagccacc aggctccatt tccagaatct gtacgagaga tatggaaatc
     1321 caattattat attgaattta gttaagacca cagaaaaaaa gcctagggaa tccattctcc
     1381 gagtggaatt tgctaatgct atagagtcaa ttaataaagg tttacctcga gaaagccagt
     1441 tgaagtttct gcactgggat ctaaacaaac attccagaaa tagatcttca gatgtgttgg
     1501 ttcttttggg aaaagtggct acttatgcgt tgaacctaac tggcttcttc tactgccaag
     1561 ttacctcaag gtcaaagtct caagagttga tggatcatgt tgtggacaaa agtggcggtg
     1621 atcattgtct gcagaaccat gcttctgaga agagtgatgg cggcgtcttt aatgacatac
     1681 ttactcatga tagcagctgt tgtgttgaaa gtagtaaagg cggtggtatg aaggctcctc
     1741 aatatcagac aggggtgttg agaacaaact gtatagattg tttggatcgg acaaatgttg
     1801 ctcagtatgc gtatggttgg gctgcacttg gccatcaact gcatgcttta ggatacatcg
     1861 atactccaag tattgagctg gattcttcac tagcagatga tttgatgagc gtttatgaga
     1921 gaatgggtga cacacttgca ctacagtatg gtggatctgc tgctcacaat aagatattta
     1981 gccagagaag agggcaatgg aaagcagcaa ctcagtccca ggagtttttt agaactctac
     2041 agcgctacta cagtaatgca tacatggacg ctcaaaaaca ggatgccatt aatttgttcc
     2101 tgggtcatta tcggccacgt catggtacac ctgcattatg ggaattggac tctaaccggc
     2161 attactatgt tggaagcagg ggtttaaatt catatgagga aaatactagg ggggtaccat
     2221 tttcaaggtc attgtcagac ggtaatatta tgagtgacgg cagggcagaa attgatattg
     2281 ggcacaggaa cgaaggagag tgtgagaact catatagtag ggaaggagaa gcagcacaag
     2341 aagatagtag aaatgggggg ttatcagaat catcacctga aatctcaact tgcgaaagag
     2401 attcatctta tccaaggtac aggtacgtca tgcctgctgc aatgtctcgt aggcggcatc
     2461 tttacctaga tactcatgct gaagattatc caaacagtga ttgcatattc tactacaaca
     2521 acaaacgttc ggattcgttc aactgctcaa atttcattga tgttgactgg atatcatcat
     2581 ctgggaattc atgcgaagga gaagcatatg aaaggtctct ctcccctttt ggtggtcaat
     2641 catctgagaa tgtggttaat gggggccctg taccatgcga ttctgaattg tgtctgcatc
     2701 caaagggaga agatgatgaa gctgttggaa agctgagagg aggggaggag taccctgatg
     2761 aatttgttga gtgggtgatg gatggaggaa tgtttttccg acggacagag acagatagaa
     2821 ggaacttgga tccttgtggt tggagttgga gcatggattg gaacaaacag attgattggt
     2881 atagttggat ttagaaacct taggaagatg ttatattctc tgtagtgtaa atatatacac
     2941 atatattttg tgtattatac aactataact aaaattatta aattattatt aattaatatt
     3001 taattattat a
//
LOCUS       XM_071829978            3008 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphoinositide phosphatase
            SAC2-like (LOC139839814), transcript variant X2, mRNA.
ACCESSION   XM_071829978
VERSION     XM_071829978.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3008
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3008
                     /gene="LOC139839814"
                     /note="phosphoinositide phosphatase SAC2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839814"
     CDS             300..2891
                     /gene="LOC139839814"
                     /codon_start=1
                     /product="phosphoinositide phosphatase SAC2-like isoform
                     X2"
                     /protein_id="XP_071686079.1"
                     /db_xref="GeneID:139839814"
                     /translation="MAAASAWIRDMPKLENAYLHKFKLYETISNYYMIGHNKNRSIYR
                     VLKIDRSEAAELNITEDSTVYTERESNELIRRIDYGNKSTGGFKSKTVCYGVVGFIKF
                     LGPYYMLLITKRKKIGVICGHAVYAIMESEIFPISNSTVAPNMDYSKNENRYLKLLRS
                     VDLRKDFYFSYTYHVMHSLQKNLSTREAGQDIYETMFVWNEFLTSAIRNQLNNNLWTV
                     PLVYGHFKQVKLLLSEKEFMLTIIARRSRHYAGTRYLKRGVNEDGCVANDVETEQLVF
                     EDNVPEGYPVQISSIVQNRGSIPLFWSQETSRLNMKPDIILSKQDNNYEATRLHFQNL
                     YERYGNPIIILNLVKTTEKKPRESILRVEFANAIESINKGLPRESQLKFLHWDLNKHS
                     RKSSDVLVLLGKVATYALNLTGFFYCQVTSRSKSQELMDHVVDKSGGDHCLQNHASEK
                     SDGGVFNDILTHDSSCCVESSKGGGMKAPQYQTGVLRTNCIDCLDRTNVAQYAYGWAA
                     LGHQLHALGYIDTPSIELDSSLADDLMSVYERMGDTLALQYGGSAAHNKIFSQRRGQW
                     KAATQSQEFFRTLQRYYSNAYMDAQKQDAINLFLGHYRPRHGTPALWELDSNRHYYVG
                     SRGLNSYEENTRGVPFSRSLSDGNIMSDGRAEIDIGHRNEGECENSYSREGEAAQEDS
                     RNGGLSESSPEISTCERDSSYPRYRYVMPAAMSRRRHLYLDTHAEDYPNSDCIFYYNN
                     KRSDSFNCSNFIDVDWISSSGNSCEGEAYERSLSPFGGQSSENVVNGGPVPCDSELCL
                     HPKGEDDEAVGKLRGGEEYPDEFVEWVMDGGMFFRRTETDRRNLDPCGWSWSMDWNKQ
                     IDWYSWI"
     misc_feature    579..1478
                     /gene="LOC139839814"
                     /note="SacI homology domain; Region: Syja_N; pfam02383"
                     /db_xref="CDD:460545"
     polyA_site      3008
                     /gene="LOC139839814"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgttctttt ggatacatac agatacagaa tacggataca gtcgcgggac atctctgaaa
       61 tttttattaa ttaattttgt ttttgttttt gtatccatct tcaccggatc atcttcatca
      121 ccgccctctg atctacgacc acctaaactt gcttactttc taaacaaaat aatcaaaagt
      181 tgtcaatttg aacttgttca ggatttcagg tttccggcgg tagagttgac cggcgatctg
      241 cttgttttaa ctgatagagc ccgggcttga gaggctcggg cttgttctga aaaacaaaca
      301 tggcggctgc ttcagcgtgg atcagagata tgcctaaact tgagaatgcc tatctccaca
      361 aattcaaact ttacgagact atctcgaact attatatgat tggacacaat aagaatagat
      421 caatttatag agttttaaag atcgacagat cagaagctgc cgagctaaac attaccgaag
      481 attctaccgt gtacacagaa agggaatcca acgaattgat acgtcgtatt gattatggga
      541 ataagtccac agggggattt aagtcgaaaa ccgtctgtta tggcgttgtc gggttcataa
      601 agtttttggg accttattac atgctgctga ttactaaaag aaagaaaatt ggtgtaattt
      661 gcgggcatgc agtatatgcg attatggaaa gcgagatctt cccaatttcc aattctactg
      721 ttgcacccaa tatggattat tctaagaacg agaacagata cttgaagctc ctccgctcgg
      781 tggatctcag aaaggacttc tatttcagtt acacatatca tgtgatgcat agtcttcaaa
      841 agaacttgtc tactcgagaa gcaggccagg atatttatga aacaatgttt gtctggaacg
      901 agtttttgac atctgcaatt cgcaatcagt tgaacaataa cctttggaca gtgccactag
      961 tttatggcca cttcaagcag gtcaaacttt tattatctga aaaggaattc atgttgacta
     1021 tcattgctag gcgatctcgt cattacgccg gaaccagata cttgaaaaga ggggttaatg
     1081 aggatgggtg cgtagccaat gatgttgaaa cagaacagtt agtgtttgaa gataatgttc
     1141 cagaaggata tcctgtgcaa ataagttcca ttgttcaaaa tcggggatca atacccctct
     1201 tctggtcaca ggaaacttca cgattgaata tgaagcctga tatcatcttg tcaaaacaag
     1261 acaataatta tgaagccacc aggctccatt tccagaatct gtacgagaga tatggaaatc
     1321 caattattat attgaattta gttaagacca cagaaaaaaa gcctagggaa tccattctcc
     1381 gagtggaatt tgctaatgct atagagtcaa ttaataaagg tttacctcga gaaagccagt
     1441 tgaagtttct gcactgggat ctaaacaaac attccagaaa atcttcagat gtgttggttc
     1501 ttttgggaaa agtggctact tatgcgttga acctaactgg cttcttctac tgccaagtta
     1561 cctcaaggtc aaagtctcaa gagttgatgg atcatgttgt ggacaaaagt ggcggtgatc
     1621 attgtctgca gaaccatgct tctgagaaga gtgatggcgg cgtctttaat gacatactta
     1681 ctcatgatag cagctgttgt gttgaaagta gtaaaggcgg tggtatgaag gctcctcaat
     1741 atcagacagg ggtgttgaga acaaactgta tagattgttt ggatcggaca aatgttgctc
     1801 agtatgcgta tggttgggct gcacttggcc atcaactgca tgctttagga tacatcgata
     1861 ctccaagtat tgagctggat tcttcactag cagatgattt gatgagcgtt tatgagagaa
     1921 tgggtgacac acttgcacta cagtatggtg gatctgctgc tcacaataag atatttagcc
     1981 agagaagagg gcaatggaaa gcagcaactc agtcccagga gttttttaga actctacagc
     2041 gctactacag taatgcatac atggacgctc aaaaacagga tgccattaat ttgttcctgg
     2101 gtcattatcg gccacgtcat ggtacacctg cattatggga attggactct aaccggcatt
     2161 actatgttgg aagcaggggt ttaaattcat atgaggaaaa tactaggggg gtaccatttt
     2221 caaggtcatt gtcagacggt aatattatga gtgacggcag ggcagaaatt gatattgggc
     2281 acaggaacga aggagagtgt gagaactcat atagtaggga aggagaagca gcacaagaag
     2341 atagtagaaa tggggggtta tcagaatcat cacctgaaat ctcaacttgc gaaagagatt
     2401 catcttatcc aaggtacagg tacgtcatgc ctgctgcaat gtctcgtagg cggcatcttt
     2461 acctagatac tcatgctgaa gattatccaa acagtgattg catattctac tacaacaaca
     2521 aacgttcgga ttcgttcaac tgctcaaatt tcattgatgt tgactggata tcatcatctg
     2581 ggaattcatg cgaaggagaa gcatatgaaa ggtctctctc cccttttggt ggtcaatcat
     2641 ctgagaatgt ggttaatggg ggccctgtac catgcgattc tgaattgtgt ctgcatccaa
     2701 agggagaaga tgatgaagct gttggaaagc tgagaggagg ggaggagtac cctgatgaat
     2761 ttgttgagtg ggtgatggat ggaggaatgt ttttccgacg gacagagaca gatagaagga
     2821 acttggatcc ttgtggttgg agttggagca tggattggaa caaacagatt gattggtata
     2881 gttggattta gaaaccttag gaagatgtta tattctctgt agtgtaaata tatacacata
     2941 tattttgtgt attatacaac tataactaaa attattaaat tattattaat taatatttaa
     3001 ttattata
//
LOCUS       XM_071829979            3001 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphoinositide phosphatase
            SAC2-like (LOC139839814), transcript variant X3, mRNA.
ACCESSION   XM_071829979
VERSION     XM_071829979.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3001
                     /gene="LOC139839814"
                     /note="phosphoinositide phosphatase SAC2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839814"
     CDS             299..2884
                     /gene="LOC139839814"
                     /codon_start=1
                     /product="phosphoinositide phosphatase SAC2-like isoform
                     X3"
                     /protein_id="XP_071686080.1"
                     /db_xref="GeneID:139839814"
                     /translation="MAAASAWIRDMPKLENAYLHKFKLYETISNYYMIGHNKNRSIYR
                     VLKIDRSEAAELNITEDSTVYTERESNELIRRIDYGNKSTGGFKSKTVCYGVVGFIKF
                     LGPYYMLLITKRKKIGVICGHAVYAIMESEIFPISNSTVAPNMDYSKNENRYLKLLRS
                     VDLRKDFYFSYTYHVMHSLQKNLSTREAGQDIYETMFVWNEFLTSAIRNQLNNNLWTV
                     PLVYGHFKQVKLLLSEKEFMLTIIARRSRHYAGTRYLKRGVNEDGCVANDVETEQLVF
                     EDNVPEGYPVQISSIVQNRGSIPLFWSQETSRLNMKPDIILSKQDNNYEATRLHFQNL
                     YERYGNPIIILNLVKTTEKKPRESILRVEFANAIESINKGLPRESQLKFLHWDLNKHS
                     RKSSDVLVLLGKVATYALNLTGFFYCQVTSRSKSQELMDHVVDKSGGDHCLQNHASEK
                     SDGGVFNDILTHDSSCCVESSKGGGMKAPQYQTGVLRTNCIDCLDRTNVAQYAYGWAA
                     LGHQLHALGYIDTPSIELDSSLADDLMSVYERMGDTLALQYGGSAAHNKIFSQRRGQW
                     KAATQSQEFFRTLQRYYSNAYMDAQKQDAINLFLGHYRPRHGTPALWELDSNRHYYVG
                     SRGLNSYEENTRGVPFSRSLSDGNIMSDGRAEIDIGHRNEGECENSYSREGEAAQEDS
                     RNGGLSESSPEISTCERDSSYPRYVMPAAMSRRRHLYLDTHAEDYPNSDCIFYYNNKR
                     SDSFNCSNFIDVDWISSSGNSCEGEAYERSLSPFGGQSSENVVNGGPVPCDSELCLHP
                     KGEDDEAVGKLRGGEEYPDEFVEWVMDGGMFFRRTETDRRNLDPCGWSWSMDWNKQID
                     WYSWI"
     misc_feature    578..1477
                     /gene="LOC139839814"
                     /note="SacI homology domain; Region: Syja_N; pfam02383"
                     /db_xref="CDD:460545"
     polyA_site      3001
                     /gene="LOC139839814"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgttcttttg gatacataca gatacagaat acggatacag tcgcgggaca tctctgaaat
       61 ttttattaat taattttgtt tttgtttttg tatccatctt caccggatca tcttcatcac
      121 cgccctctga tctacgacca cctaaacttg cttactttct aaacaaaata atcaaaagtt
      181 gtcaatttga acttgttcag gatttcaggt ttccggcggt agagttgacc ggcgatctgc
      241 ttgttttaac tgatagagcc cgggcttgag aggctcgggc ttgttctgaa aaacaaacat
      301 ggcggctgct tcagcgtgga tcagagatat gcctaaactt gagaatgcct atctccacaa
      361 attcaaactt tacgagacta tctcgaacta ttatatgatt ggacacaata agaatagatc
      421 aatttataga gttttaaaga tcgacagatc agaagctgcc gagctaaaca ttaccgaaga
      481 ttctaccgtg tacacagaaa gggaatccaa cgaattgata cgtcgtattg attatgggaa
      541 taagtccaca gggggattta agtcgaaaac cgtctgttat ggcgttgtcg ggttcataaa
      601 gtttttggga ccttattaca tgctgctgat tactaaaaga aagaaaattg gtgtaatttg
      661 cgggcatgca gtatatgcga ttatggaaag cgagatcttc ccaatttcca attctactgt
      721 tgcacccaat atggattatt ctaagaacga gaacagatac ttgaagctcc tccgctcggt
      781 ggatctcaga aaggacttct atttcagtta cacatatcat gtgatgcata gtcttcaaaa
      841 gaacttgtct actcgagaag caggccagga tatttatgaa acaatgtttg tctggaacga
      901 gtttttgaca tctgcaattc gcaatcagtt gaacaataac ctttggacag tgccactagt
      961 ttatggccac ttcaagcagg tcaaactttt attatctgaa aaggaattca tgttgactat
     1021 cattgctagg cgatctcgtc attacgccgg aaccagatac ttgaaaagag gggttaatga
     1081 ggatgggtgc gtagccaatg atgttgaaac agaacagtta gtgtttgaag ataatgttcc
     1141 agaaggatat cctgtgcaaa taagttccat tgttcaaaat cggggatcaa tacccctctt
     1201 ctggtcacag gaaacttcac gattgaatat gaagcctgat atcatcttgt caaaacaaga
     1261 caataattat gaagccacca ggctccattt ccagaatctg tacgagagat atggaaatcc
     1321 aattattata ttgaatttag ttaagaccac agaaaaaaag cctagggaat ccattctccg
     1381 agtggaattt gctaatgcta tagagtcaat taataaaggt ttacctcgag aaagccagtt
     1441 gaagtttctg cactgggatc taaacaaaca ttccagaaaa tcttcagatg tgttggttct
     1501 tttgggaaaa gtggctactt atgcgttgaa cctaactggc ttcttctact gccaagttac
     1561 ctcaaggtca aagtctcaag agttgatgga tcatgttgtg gacaaaagtg gcggtgatca
     1621 ttgtctgcag aaccatgctt ctgagaagag tgatggcggc gtctttaatg acatacttac
     1681 tcatgatagc agctgttgtg ttgaaagtag taaaggcggt ggtatgaagg ctcctcaata
     1741 tcagacaggg gtgttgagaa caaactgtat agattgtttg gatcggacaa atgttgctca
     1801 gtatgcgtat ggttgggctg cacttggcca tcaactgcat gctttaggat acatcgatac
     1861 tccaagtatt gagctggatt cttcactagc agatgatttg atgagcgttt atgagagaat
     1921 gggtgacaca cttgcactac agtatggtgg atctgctgct cacaataaga tatttagcca
     1981 gagaagaggg caatggaaag cagcaactca gtcccaggag ttttttagaa ctctacagcg
     2041 ctactacagt aatgcataca tggacgctca aaaacaggat gccattaatt tgttcctggg
     2101 tcattatcgg ccacgtcatg gtacacctgc attatgggaa ttggactcta accggcatta
     2161 ctatgttgga agcaggggtt taaattcata tgaggaaaat actagggggg taccattttc
     2221 aaggtcattg tcagacggta atattatgag tgacggcagg gcagaaattg atattgggca
     2281 caggaacgaa ggagagtgtg agaactcata tagtagggaa ggagaagcag cacaagaaga
     2341 tagtagaaat ggggggttat cagaatcatc acctgaaatc tcaacttgcg aaagagattc
     2401 atcttatcca aggtacgtca tgcctgctgc aatgtctcgt aggcggcatc tttacctaga
     2461 tactcatgct gaagattatc caaacagtga ttgcatattc tactacaaca acaaacgttc
     2521 ggattcgttc aactgctcaa atttcattga tgttgactgg atatcatcat ctgggaattc
     2581 atgcgaagga gaagcatatg aaaggtctct ctcccctttt ggtggtcaat catctgagaa
     2641 tgtggttaat gggggccctg taccatgcga ttctgaattg tgtctgcatc caaagggaga
     2701 agatgatgaa gctgttggaa agctgagagg aggggaggag taccctgatg aatttgttga
     2761 gtgggtgatg gatggaggaa tgtttttccg acggacagag acagatagaa ggaacttgga
     2821 tccttgtggt tggagttgga gcatggattg gaacaaacag attgattggt atagttggat
     2881 ttagaaacct taggaagatg ttatattctc tgtagtgtaa atatatacac atatattttg
     2941 tgtattatac aactataact aaaattatta aattattatt aattaatatt taattattat
     3001 a
//
LOCUS       XM_071829980            3004 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphoinositide phosphatase
            SAC2-like (LOC139839814), transcript variant X4, mRNA.
ACCESSION   XM_071829980
VERSION     XM_071829980.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3004
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3004
                     /gene="LOC139839814"
                     /note="phosphoinositide phosphatase SAC2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839814"
     CDS             299..2887
                     /gene="LOC139839814"
                     /codon_start=1
                     /product="phosphoinositide phosphatase SAC2-like isoform
                     X4"
                     /protein_id="XP_071686081.1"
                     /db_xref="GeneID:139839814"
                     /translation="MAAASAWIRDMPKLENAYLHKFKLYETISNYYMIGHNKNRSIYR
                     VLKIDRSEAAELNITEDSTVYTERESNELIRRIDYGNKSTGGFKSKTVCYGVVGFIKF
                     LGPYYMLLITKRKKIGVICGHAVYAIMESEIFPISNSTVAPNMDYSKNENRYLKLLRS
                     VDLRKDFYFSYTYHVMHSLQKNLSTREAGQDIYETMFVWNEFLTSAIRNQLNNNLWTV
                     PLVYGHFKQVKLLLSEKEFMLTIIARRSRHYAGTRYLKRGVNEDGCVANDVETEQLVF
                     EDNVPEGYPVQISSIVQNRGSIPLFWSQETSRLNMKPDIILSKQDNNYEATRLHFQNL
                     YERYGNPIIILNLVKTTEKKPRESILRVEFANAIESINKGLPRESQLKFLHWDLNKHS
                     RNRSSDVLVLLGKVATYALNLTGFFYCQVTSRSKSQELMDHVVDKSGGDHCLQNHASE
                     KSDGGVFNDILTHDSSCCVESSKGGGMKAPQYQTGVLRTNCIDCLDRTNVAQYAYGWA
                     ALGHQLHALGYIDTPSIELDSSLADDLMSVYERMGDTLALQYGGSAAHNKIFSQRRGQ
                     WKAATQSQEFFRTLQRYYSNAYMDAQKQDAINLFLGHYRPRHGTPALWELDSNRHYYV
                     GSRGLNSYEENTRGVPFSRSLSDGNIMSDGRAEIDIGHRNEGECENSYSREGEAAQED
                     SRNGGLSESSPEISTCERDSSYPRYVMPAAMSRRRHLYLDTHAEDYPNSDCIFYYNNK
                     RSDSFNCSNFIDVDWISSSGNSCEGEAYERSLSPFGGQSSENVVNGGPVPCDSELCLH
                     PKGEDDEAVGKLRGGEEYPDEFVEWVMDGGMFFRRTETDRRNLDPCGWSWSMDWNKQI
                     DWYSWI"
     misc_feature    578..1477
                     /gene="LOC139839814"
                     /note="SacI homology domain; Region: Syja_N; pfam02383"
                     /db_xref="CDD:460545"
     polyA_site      3004
                     /gene="LOC139839814"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgttcttttg gatacataca gatacagaat acggatacag tcgcgggaca tctctgaaat
       61 ttttattaat taattttgtt tttgtttttg tatccatctt caccggatca tcttcatcac
      121 cgccctctga tctacgacca cctaaacttg cttactttct aaacaaaata atcaaaagtt
      181 gtcaatttga acttgttcag gatttcaggt ttccggcggt agagttgacc ggcgatctgc
      241 ttgttttaac tgatagagcc cgggcttgag aggctcgggc ttgttctgaa aaacaaacat
      301 ggcggctgct tcagcgtgga tcagagatat gcctaaactt gagaatgcct atctccacaa
      361 attcaaactt tacgagacta tctcgaacta ttatatgatt ggacacaata agaatagatc
      421 aatttataga gttttaaaga tcgacagatc agaagctgcc gagctaaaca ttaccgaaga
      481 ttctaccgtg tacacagaaa gggaatccaa cgaattgata cgtcgtattg attatgggaa
      541 taagtccaca gggggattta agtcgaaaac cgtctgttat ggcgttgtcg ggttcataaa
      601 gtttttggga ccttattaca tgctgctgat tactaaaaga aagaaaattg gtgtaatttg
      661 cgggcatgca gtatatgcga ttatggaaag cgagatcttc ccaatttcca attctactgt
      721 tgcacccaat atggattatt ctaagaacga gaacagatac ttgaagctcc tccgctcggt
      781 ggatctcaga aaggacttct atttcagtta cacatatcat gtgatgcata gtcttcaaaa
      841 gaacttgtct actcgagaag caggccagga tatttatgaa acaatgtttg tctggaacga
      901 gtttttgaca tctgcaattc gcaatcagtt gaacaataac ctttggacag tgccactagt
      961 ttatggccac ttcaagcagg tcaaactttt attatctgaa aaggaattca tgttgactat
     1021 cattgctagg cgatctcgtc attacgccgg aaccagatac ttgaaaagag gggttaatga
     1081 ggatgggtgc gtagccaatg atgttgaaac agaacagtta gtgtttgaag ataatgttcc
     1141 agaaggatat cctgtgcaaa taagttccat tgttcaaaat cggggatcaa tacccctctt
     1201 ctggtcacag gaaacttcac gattgaatat gaagcctgat atcatcttgt caaaacaaga
     1261 caataattat gaagccacca ggctccattt ccagaatctg tacgagagat atggaaatcc
     1321 aattattata ttgaatttag ttaagaccac agaaaaaaag cctagggaat ccattctccg
     1381 agtggaattt gctaatgcta tagagtcaat taataaaggt ttacctcgag aaagccagtt
     1441 gaagtttctg cactgggatc taaacaaaca ttccagaaat agatcttcag atgtgttggt
     1501 tcttttggga aaagtggcta cttatgcgtt gaacctaact ggcttcttct actgccaagt
     1561 tacctcaagg tcaaagtctc aagagttgat ggatcatgtt gtggacaaaa gtggcggtga
     1621 tcattgtctg cagaaccatg cttctgagaa gagtgatggc ggcgtcttta atgacatact
     1681 tactcatgat agcagctgtt gtgttgaaag tagtaaaggc ggtggtatga aggctcctca
     1741 atatcagaca ggggtgttga gaacaaactg tatagattgt ttggatcgga caaatgttgc
     1801 tcagtatgcg tatggttggg ctgcacttgg ccatcaactg catgctttag gatacatcga
     1861 tactccaagt attgagctgg attcttcact agcagatgat ttgatgagcg tttatgagag
     1921 aatgggtgac acacttgcac tacagtatgg tggatctgct gctcacaata agatatttag
     1981 ccagagaaga gggcaatgga aagcagcaac tcagtcccag gagtttttta gaactctaca
     2041 gcgctactac agtaatgcat acatggacgc tcaaaaacag gatgccatta atttgttcct
     2101 gggtcattat cggccacgtc atggtacacc tgcattatgg gaattggact ctaaccggca
     2161 ttactatgtt ggaagcaggg gtttaaattc atatgaggaa aatactaggg gggtaccatt
     2221 ttcaaggtca ttgtcagacg gtaatattat gagtgacggc agggcagaaa ttgatattgg
     2281 gcacaggaac gaaggagagt gtgagaactc atatagtagg gaaggagaag cagcacaaga
     2341 agatagtaga aatggggggt tatcagaatc atcacctgaa atctcaactt gcgaaagaga
     2401 ttcatcttat ccaaggtacg tcatgcctgc tgcaatgtct cgtaggcggc atctttacct
     2461 agatactcat gctgaagatt atccaaacag tgattgcata ttctactaca acaacaaacg
     2521 ttcggattcg ttcaactgct caaatttcat tgatgttgac tggatatcat catctgggaa
     2581 ttcatgcgaa ggagaagcat atgaaaggtc tctctcccct tttggtggtc aatcatctga
     2641 gaatgtggtt aatgggggcc ctgtaccatg cgattctgaa ttgtgtctgc atccaaaggg
     2701 agaagatgat gaagctgttg gaaagctgag aggaggggag gagtaccctg atgaatttgt
     2761 tgagtgggtg atggatggag gaatgttttt ccgacggaca gagacagata gaaggaactt
     2821 ggatccttgt ggttggagtt ggagcatgga ttggaacaaa cagattgatt ggtatagttg
     2881 gatttagaaa ccttaggaag atgttatatt ctctgtagtg taaatatata cacatatatt
     2941 ttgtgtatta tacaactata actaaaatta ttaaattatt attaattaat atttaattat
     3001 tata
//
LOCUS       XM_071829981             954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
            (LOC139839815), mRNA.
ACCESSION   XM_071829981
VERSION     XM_071829981.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..954
                     /gene="LOC139839815"
                     /note="1-aminocyclopropane-1-carboxylate oxidase homolog
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139839815"
     CDS             60..926
                     /gene="LOC139839815"
                     /codon_start=1
                     /product="1-aminocyclopropane-1-carboxylate oxidase
                     homolog 1-like"
                     /protein_id="XP_071686082.1"
                     /db_xref="GeneID:139839815"
                     /translation="MGLNASPGIIQPEYDRKTELKAFDETKTGVKGLVDSGITQVPRI
                     FHLPCPENLNSDQTSGSKPTLPTIDMDGINEDSIKRKEVMKKVKDAFERWGFFQIVNH
                     GIPIDILEDVKKGILGFFEQDTDVKKEWYSRDVSGKSRVVYNSNFDLYSAPVTNWRDS
                     FYCIMAPNPPEPHELPLPCRDVWPDYARRMMKLGCCLFELISEALGLDPNHLFDMGCA
                     EGLALLGHYYPSCPQPELTIGTPNHADNDFITILLQDHVGGLQVLYENQWIDVPPIPG
                     ALVVNAGDLLQA"
     misc_feature    147..>920
                     /gene="LOC139839815"
                     /note="leucoanthocyanidin dioxygenase like protein;
                     Region: PLN02393"
                     /db_xref="CDD:215220"
ORIGIN      
        1 tttgaggata aagttacaca cgttactata gtcgtatagc cgccaaacat agaaactaga
       61 tgggtctgaa tgccagtccg ggaataatcc aaccggaata cgaccgtaaa accgagctaa
      121 aagcattcga cgaaaccaag accggagtca aaggactcgt tgactctgga ataacacaag
      181 tccctcgtat attccacttg ccatgtcccg aaaatctcaa ttccgaccaa acatctgggt
      241 caaaaccaac tcttccgacc atcgacatgg atggaatcaa cgaggattcg atcaagcgaa
      301 aggaggtgat gaagaaagtg aaagatgcgt ttgagaggtg gggatttttt cagattgtga
      361 atcatggaat accaattgac attttggagg atgtgaaaaa gggtatttta gggttttttg
      421 aacaagatac agatgtaaag aaggagtggt attcaagaga tgtgagtggg aagagtaggg
      481 tggtatataa cagcaacttt gatttgtact cggcaccggt gactaattgg cgtgactcgt
      541 tttactgtat catggctcct aatccacctg aaccacatga gttgccactc ccttgcagag
      601 atgtatggcc ggactacgcg agacgaatga tgaagcttgg atgttgtttg ttcgagttaa
      661 tatccgaggc tcttgggctc gaccctaatc acctttttga catggggtgt gccgaagggc
      721 ttgcccttct tggccattac tatccttcat gtccgcaacc tgagttaaca attggaaccc
      781 ccaatcatgc cgacaacgat ttcatcacca ttcttttgca agaccatgtt ggcggccttc
      841 aagtgcttta cgagaatcag tggatcgacg ttcccccaat tccaggagct ctcgtagtga
      901 acgccggtga ccttctacag gcataagtct atctatcaac ctataaatat tttg
//
LOCUS       XM_071829982            6123 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA-directed RNA polymerase
            II subunit RPB1-like (LOC139839816), mRNA.
ACCESSION   XM_071829982
VERSION     XM_071829982.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6123
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6123
                     /gene="LOC139839816"
                     /note="DNA-directed RNA polymerase II subunit RPB1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139839816"
     CDS             283..5799
                     /gene="LOC139839816"
                     /codon_start=1
                     /product="DNA-directed RNA polymerase II subunit
                     RPB1-like"
                     /protein_id="XP_071686083.1"
                     /db_xref="GeneID:139839816"
                     /translation="MDIRFPYSPAEVSKVRVVQFGILSPDEIRQMSVVHIEHGETTER
                     GKPKVAGLSDPRLGTIDRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIM
                     RCVCFNCSKILADEEDHKFKQAQKIRNPKNRLKKILDACKSKTKCDGGDEIDSQNQDG
                     DEPVKKSRGGCGAQQPKITIEGMKMVAEYKLQKKKSDDSEQLPEPAERKQQLSAERVL
                     SVLKRVSDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQL
                     AMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKS
                     ICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTP
                     YNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLEFGYKVERHLN
                     DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSF
                     ETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWW
                     EDFDGKVPTPTILKPRPLWTGKQVFNLIIPKQINLIRTAAWHSETETGHLTPGDTQVR
                     IEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSI
                     GIGDTIADASTMETINETISKAKNEVKELIRAAQDKQLEAEPGRTMMESFENRVNQVL
                     NKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI
                     DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQ
                     RRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKIKKKEFDRL
                     FRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRVQLGTEIATTGDNS
                     WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDLLSIEAQ
                     KNATLFFNILLRSTFASKRVLSEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA
                     QSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKT
                     KDRAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVDFVKSYYEMPDEEIDPEK
                     ISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMND
                     EAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDENEGFKP
                     EVEWMLDTEGVNLLAVMTHEDVDALRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF
                     DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYA
                     ETDYLRGVTENIMLGQLAPIGTGDCSLLLNEQMLQQAIDVQLPSYMDGLDIGMTPGRS
                     PITPFHDGSMSPTNYLLSPNLRLSPINDAQFSPYVGGMGFSPTSSPGYSPSSPGYSPS
                     SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPTYSPTSPSYSPTSP
                     SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSY
                     SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSP
                     TSPSYNPSSAKYSPSLAYSPSSPRPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYS
                     PSSPYGSGVGPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQTSNKDDGSRP"
     misc_feature    334..2895
                     /gene="LOC139839816"
                     /note="Largest subunit (Rpb1) of eukaryotic RNA polymerase
                     II (RNAP II), N-terminal domain; Region: RNAP_II_RPB1_N;
                     cd02733"
                     /db_xref="CDD:259848"
     misc_feature    order(349..351,361..363,370..375,508..516,520..522,
                     553..555,1018..1020,1024..1026,1030..1032,1045..1050,
                     1222..1224,1285..1287,1294..1299,1306..1308,1327..1329,
                     1336..1338,1342..1365,1378..1386,1420..1422,1429..1434,
                     1648..1650,1654..1656,1660..1662,1672..1677,1681..1686,
                     1717..1722,1726..1728,1735..1737,1762..1773,1777..1779,
                     1783..1785,1789..1791,1798..1803,1810..1812,1819..1824,
                     1831..1836,1849..1851,1894..1899,1906..1908,2305..2310,
                     2572..2574,2587..2592,2605..2607,2614..2619,2644..2649,
                     2737..2742,2746..2754,2761..2766,2773..2778,2782..2790,
                     2797..2802,2806..2811,2848..2853,2860..2862,2872..2874)
                     /gene="LOC139839816"
                     /note="RPB1 - RPB2 interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:259848"
     misc_feature    order(349..390,397..399,514..591,1003..1062,1174..1194,
                     1201..1227,1282..1332,1336..1350)
                     /gene="LOC139839816"
                     /note="clamp; other site"
                     /db_xref="CDD:259848"
     misc_feature    order(397..411,502..504,1054..1056,1060..1062,1078..1095,
                     1099..1107,1111..1116,1123..1125,1135..1137,1183..1185,
                     1192..1197,1204..1209,1234..1251,1258..1275,1279..1281,
                     1294..1296,1309..1311,1531..1533,1540..1542,1552..1563,
                     1567..1575)
                     /gene="LOC139839816"
                     /note="RPB1-TFIIB interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:259848"
     misc_feature    order(478..480,487..489,508..510,517..519)
                     /gene="LOC139839816"
                     /note="Zn-binding [ion binding]; other site"
                     /db_xref="CDD:259848"
     misc_feature    order(577..582,1306..1308,1321..1323,1342..1344,
                     1360..1362,1657..1665,1762..1764,1768..1770,1774..1776,
                     2839..2844)
                     /gene="LOC139839816"
                     /note="active site region [active]"
                     /db_xref="CDD:259848"
     misc_feature    2953..3507
                     /gene="LOC139839816"
                     /note="RNA polymerase Rpb1, domain 6; Region:
                     RNA_pol_Rpb1_6; pfam04992"
                     /db_xref="CDD:461511"
     misc_feature    3442..4680
                     /gene="LOC139839816"
                     /note="Largest subunit (Rpb1) of Eukaryotic RNA polymerase
                     II (RNAP II), C-terminal domain; Region: RNAP_II_Rpb1_C;
                     cd02584"
                     /db_xref="CDD:132720"
     misc_feature    order(3499..3504,3514..3516,3523..3525,4654..4656,
                     4663..4674,4678..4680)
                     /gene="LOC139839816"
                     /note="Rpb1 - Rpb6 interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:132720"
     misc_feature    order(3514..3606,3610..3702,3718..3762,4165..4167,
                     4186..4218,4228..4413,4420..4479,4483..4527)
                     /gene="LOC139839816"
                     /note="cleft [active]"
                     /db_xref="CDD:132720"
     misc_feature    order(3526..3528,3535..3537,4135..4137,4147..4149,
                     4570..4572,4600..4608,4624..4629,4633..4635,4639..4641,
                     4654..4656)
                     /gene="LOC139839816"
                     /note="Rpb1 - Rpb2 interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:132720"
     misc_feature    order(3661..3663,4498..4500,4549..4554,4561..4563)
                     /gene="LOC139839816"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:132720"
     misc_feature    order(4294..4296,4312..4317,4321..4323,4351..4371,
                     4375..4377,4435..4437,4468..4473,4477..4479)
                     /gene="LOC139839816"
                     /note="Rpb1 - Rpb5 interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:132720"
     misc_feature    4525..4650
                     /gene="LOC139839816"
                     /note="clamp [active]"
                     /db_xref="CDD:132720"
     polyA_site      6123
                     /gene="LOC139839816"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acgctccttc ctctctctct ttttctcccc tctatggtct ctgattttta tacgattcta
       61 ttctagttga tctttgtaat atttattata gacatctagt gtctctgatt gatatcttcc
      121 tcaattaata ttgtttctct tgtgattcta tatagtgcgg tgaggtatat gagataatta
      181 gggttttacc tgtgcgtaat tcttaatgtc gattgaagta taaaaactga tagaatagaa
      241 tttgggtaaa tttacgttcc tactcagtaa taacaataaa taatggatat acggtttccg
      301 tactctccgg ctgaagtttc aaaagtccgt gtggttcagt tcggtatcct cagtcccgat
      361 gaaattaggc aaatgtcagt ggtgcacata gagcatggtg aaacaacaga aagggggaaa
      421 ccaaaagtag caggacttag tgatcccagg ctcgggacga ttgataggaa gctcaaatgt
      481 gagacttgta tggccaatat ggctgagtgc cctggtcatt ttggacatct tgagcttgct
      541 aaacctatgt ttcatattgg atttatgaag accgtactca gtattatgcg atgtgtttgc
      601 tttaattgct ccaagatcct tgctgatgag gaagatcata agttcaagca agcacagaaa
      661 ataagaaacc caaaaaacag gcttaaaaaa atcttagatg catgcaagag caaaactaaa
      721 tgtgacggtg gtgatgagat tgattctcaa aaccaagatg gtgatgagcc ggtcaaaaag
      781 agccgagggg gttgtggggc ccagcagccg aagattacta ttgaaggtat gaaaatggtt
      841 gcagaataca agcttcagaa gaagaaaagt gacgactcag agcagcttcc tgagccagct
      901 gaaagaaagc agcaactttc tgcagaaaga gtcctgagtg tgttaaaaag agtaagtgat
      961 gaagattgct tgttgttggg cttgaacccc aaatatgctc gcccagattg gatgatcttg
     1021 caggtccttc caataccacc gcctccagtc cgaccatctg tcatgatgga tacctcagct
     1081 agaagtgagg acgacttaac ccatcagctg gccatgataa tcagacacaa tgagaatctg
     1141 aggaggcaag aaaggaatgg agctcctgct cacattatct ccgagtttgc tcagctactg
     1201 cagtttcatg ttgccacata tttcgacaat gagctcccgg gtcagcccag ggctacacaa
     1261 cggtcaggtc gtcctatcaa atccatatgc agtaggctca aggccaagga aggtcggatt
     1321 agaggcaacc tgatgggaaa gcgtgttgac ttttcagcac gtactgtcat caccccagat
     1381 ccaaccatta acatagatca actgggagta ccatggagta ttgctcttaa tcttacttat
     1441 cccgaaacag ttactcctta taacatagaa aggctgaagg agcttgttga gtacggtccc
     1501 catcctcccc ctggtaaaac tggagccaaa tatatcatca gggaagatgg tcaaaggctt
     1561 gatcttcgtt acttgaagaa aagcagcgat catcatctgg agtttggata caaggtggag
     1621 cgacacttga atgatggaga ttttgtactt ttcaatcgac aaccgagtct gcataagatg
     1681 tccataatgg ggcataggat caaaatcatg ccatactcca ccttccggtt aaatctgtca
     1741 gtcacttcac catataatgc tgattttgac ggagatgaaa tgaacatgca cgtacctcag
     1801 tcatttgaaa caagagcaga ggttcttgag ttgatgatgg tgcctaaatg cattgtctcg
     1861 cctcaagcaa ataggcctgt tatgggtatt gtgcaagata cacttttagg ctgtcgtaaa
     1921 gtcaccaaga gggatacatt cattgagaag gacgttttca tgaatatatt gatgtggtgg
     1981 gaagattttg atggaaaagt tccaacaccc accattttga aaccaagacc tctgtggacg
     2041 gggaaacagg tgttcaatct cattatccca aagcagatta atctcatcag aacagcagct
     2101 tggcattcag aaactgaaac cgggcatcta acgcctggtg acactcaagt tcgaatagag
     2161 aagggagagg tgatcactgg tactctttgt aagaaaacgc tcggtgcatc cactggaagt
     2221 cttatacacg tcatatggga ggaggttggt ccagatgctg ctcgtaagtt tcttggacat
     2281 acgcagtggc ttgtgaacta ctggcttttg caacaagggt tcagcattgg gattggagac
     2341 acaattgctg atgcatccac tatggaaacc atcaacgaaa ctatttccaa agccaaaaat
     2401 gaggtgaaag aacttattag ggctgctcaa gataaacagc tggaagcaga gcctggtcgt
     2461 accatgatgg agtcattcga aaatagagtt aatcaggtgt taaacaaggc tcgtgatgat
     2521 gcaggaagta gtgcccaaaa aagtttatca gaaagcaaca atcttaaggc aatggtgacg
     2581 gcaggttcaa aaggaagttt catcaatata tcacagatga ctgcttgtgt ggggcagcaa
     2641 aacgttgagg gtaagagaat tccatatggt ttcatagacc ggactcttcc tcatttcaca
     2701 aaagatgatt atgggcctga aagccgtggg tttgtggaga actcgtatct tcgaggatta
     2761 acaccgcaag aattcttttt tcacgccatg ggtggtagag aaggtctaat tgacactgct
     2821 gtcaaaacat ctgaaactgg ttatattcaa aggcggttag taaaagccat ggaagatatt
     2881 atggtcaagt acgacggtac agtcaggaat tctctgggag atgttattca gtttctatat
     2941 ggtgaagatg gtatggatgc agtttggatt gaaagtcaga aacttgattc attaaaaatc
     3001 aagaaaaagg agtttgaccg gcttttcaga tatgagattg atgatgaaaa ctggaatcca
     3061 agttatatgc ttccagaaca tgtcgaggat ttaaaaacta ttcgggaatt ccgcaatgtg
     3121 tttgatgctg aagttcaaaa actcgaagcc gatcgagtcc aacttggaac cgagatcgct
     3181 actactggtg ataactcgtg gccaatgccc gtgaatctta aacgactgat atggaatgcg
     3241 caaaagactt ttaaggttga tttgaggcgg ccttcggata tgcaccccat ggaaatcgtg
     3301 gaagctgttg ataagcttca agaacgcttg cgagttgttc ccggtgatga tttgttgagt
     3361 attgaagctc aaaagaatgc aactctgttc ttcaacattc tcctgcgtag cacgtttgct
     3421 agcaaacgag tgttgagtga gtacagactt acacgtgagg catttgagtg ggttattggt
     3481 gagatagagt cgaggttctt acagtcactt gttgcacctg gagaaatgat tgggtgtgtt
     3541 gcagcgcagt caattggtga gcctgcaacc caaatgactc taaacacctt tcattatgct
     3601 ggtgtgagtg caaagaatgt gactctcggt gttccccgat tgagagagat tatcaatgtt
     3661 gctaagaaga tcaaaacccc ttcgttgtct gtgtatttga agccagatgt tagcaagaca
     3721 aaggatcggg ccaagaatgt tcaatgtgcg ttggaataca cgacacttcg cagtgtgact
     3781 caagctactg aagtatggta tgacccggat cccatgagta cccttattga agaggatgtt
     3841 gactttgtta agtcatacta cgaaatgccg gatgaagaaa tcgaccccga aaaaatatct
     3901 ccatggctgc tccgtatcga gttgaatcgt gaaatgatgg ttgataaaaa gttgagcatg
     3961 gcagatattg ctgagaagat taatctcgag tttgatgatg atttgacttg tatattcaat
     4021 gatgacaatg ctgagaagtt gattctacgt atacgtatca tgaatgatga agctccgaaa
     4081 ggtgagttgc aagatgaatc agctgaagat gatgtttttc tcaagaagat tgagagtaat
     4141 atgctgaccg aaatggctct acgagggatt cctgatatta acaaggtgtt tataaaatcg
     4201 ggaaaagtga acaagtttga cgaaaatgaa ggatttaagc cggaagttga atggatgcta
     4261 gatactgaag gtgtaaatct gttggctgtt atgactcatg aagatgtgga tgccttacgg
     4321 acgactagta atcatttgat tgaagtgatt gaagtactag ggatcgaagc ggttcgaagg
     4381 tcgttattgg acgagcttcg tgtggttatt tcttttgatg gatcctatgt caattatcgg
     4441 catttggcta tattgtgtga tactatgact tatcgtggtc atcttatggc tataacacgt
     4501 cacgggatca ataggaatga taccggaccc atgatgcgat gttcatttga agaaacagtt
     4561 gatatcctcc ttgatgccgc tgtgtatgct gaaaccgatt accttcgggg agttactgaa
     4621 aatataatgt tgggccaact tgctcctata gggacaggag attgttcttt gttgttaaat
     4681 gagcagatgc tacaacaagc catagatgtt cagctcccca gttatatgga cggtcttgat
     4741 attggaatga cacctggcag atcaccaatt actcctttcc atgacggctc aatgtcgcct
     4801 accaattacc ttctgagccc aaatctacga ttgtcaccga ttaacgatgc acagttttca
     4861 ccttatgttg gtgggatggg cttttctccc acatcttcac ccggatacag tccatcctcc
     4921 cctggttaca gcccgtcatc tcctggctat agcccaactt cacctggcta tagccctacc
     4981 tcacctggtt atagccctac ttcacctggc tatagtccta cttcaccgac atacagtcca
     5041 agttcacctg gttatagccc taccagtcca acttactccc ccacctcacc tagctattcc
     5101 cctacctcac ctagttactc acccacctca cccagttact ccccaacctc acccagttac
     5161 tcaccgacat cacctagtta cagcccgaca tctcctgctt acagcccgac atcacctgca
     5221 tacagcccaa catcgccagc atacagcccg acctctccat catacagccc gacctcacca
     5281 tcctacagtc caacttcacc atcatacagc ccgacctcac cgtcctacag cccgacctct
     5341 ccgtcgtaca gtcctacctc tccatcttat agcccaacgt cacctgccta cagtcctact
     5401 tcccctggat atagcccgac ttcgccaagt tatagcccta cttcacctag ctatagtcca
     5461 acctcaccaa gttacaatcc ttcatcagcc aagtacagcc cctctctggc ttattcccct
     5521 agcagtccaa ggccttcaag tccatatagc cctacatctc ccaattacag tcccacttca
     5581 ccatcatatt ctccaacctc tccatcttac tcaccttcaa gcccaacata cagtcctagc
     5641 agtccttatg gctccggtgt tggtcctgac tacagcccaa gctcaccgca atacagtccc
     5701 agtgctgggt actcaccgag tgcacctgga tattcaccat cgtcgaccag ccagtatact
     5761 cctcaaacta gcaacaagga cgatgggtcg aggccttagt atgactgttg gacatttctt
     5821 tggaaataaa ttctgctttt tgtatcgcat gacgcatcta tgtgtaacat cataatgtta
     5881 gatggtgtat gacaggattc tgggagtagt tgaacttcaa ctcgtttgct atgaaactga
     5941 aacgatacta gtgtgttgtt ttgaatactt tttggaatgc tgcgtttgtt gctccaaaga
     6001 gcaagtaaaa caaactaggg ttgtctgtta tttgttgtgt caattagcat gtagattcct
     6061 aaatctgctt aatggacatt tacatccaga tgtttctaat aaacgttgtt agaagtttga
     6121 gtc
//
LOCUS       XR_011757084             413 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839817), ncRNA.
ACCESSION   XR_011757084
VERSION     XR_011757084.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..413
                     /gene="LOC139839817"
                     /note="uncharacterized LOC139839817; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839817"
     ncRNA           1..413
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839817"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839817"
ORIGIN      
        1 tagcgccgct gactacaagc ttgaagaaga atgtaaaaat cggttctctc aggtttatct
       61 cccaaattaa ctatgctcat ctccaagaca atttcattta tgtacagatc tagcgcacct
      121 ttttgtaatt acatggcaat aacatcactc catccattgt taagaatttg atcccatttt
      181 gtgaagatac cttcaaagag ggcagctact tcgatattac tatttttgga tttagagaat
      241 ataaggatgc gtatcatttg gtatcacata actagatgat tcgtctatac tattcaacaa
      301 aagttcaggt agttggacaa ctcgtcaacc tagggaattt atgggtgaac agggatacta
      361 gtgttgacac caaatttgag aaaacagcaa cagtcctaat tcttatacaa atg
//
LOCUS       XR_011757085            2176 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X1, ncRNA.
ACCESSION   XR_011757085
VERSION     XR_011757085.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2176
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..2176
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 tacacccact ctacccctca actcttcgca gattactccg acccaaacgc agatccgcag
       61 gtggtttaat cacaaggagg ttctccctgc aaaccataat aaggaccaag aggcaaataa
      121 gtatatgaca tgtaatggct gaattactat gaatgcccat gacaccctcc attctcgtca
      181 gttacacata tttcaatttc tgctaacgaa tctaggtgat gtttttttct atctccctta
      241 tcttttgatt tactgaaaac ccaatattta atgtggagtt gttctacaat atatatataa
      301 tctacagtat gcagtttttt tgttgtgatt atgttttcaa tgaaaatgac ggttctgata
      361 tatgggcatg gaattgaaat ttgttcattt gtggctcgtt gggggtttta tgctgttgat
      421 tcgggtttat tttgtctctt gttgtaaatg ttgtgggttt cgttgttggt ttgccaaaat
      481 atttattgaa ttgatggttc cgataggggg tcttatgggt ttccgtgccg gtttagaatt
      541 gagttcactt ttcgatgttg gtttatatca tggctcgtag aaacttacct tgctggtttg
      601 caaaatctgt ttagaattga cggttgcttt gttggattac attatgactt gtaaaacgag
      661 tcccttcttt gtgggtttca atgttgattt gccgaatttt gtttggaatt gacagttcaa
      721 tgtcggttta tatcgtgaat tgtagaagga ttcctttgtg ggaattggtt gatttgccaa
      781 aatctgtttg aaattgaagg ttttaataat gtgggtttat atcatggttt ttaaaaaaaa
      841 aaacgttctg caaggtttgc taaattctgt ttagtggcag tttagctgtc ggttcatatc
      901 gtggcttcaa caaaaagtcc cttgcgatgt tgggttacca aacactgttt agaataagat
      961 ggtttcaatg tgggttctta gctttattaa ggagttactt gtgggtttag atgtttgtct
     1021 agattgagat gtcgaggaaa atgctggttt cttaaacgtg gtttctatac gaggttatgt
     1081 ttattggcgt gatactggtt ttaactgcca ccaaatgctc ctccgtatac actgttctca
     1141 tatgttttat attgcttctg tttggatctg catttttttt tttttttttt ttttgcattc
     1201 agaagatcat ttggtcagca gatatttttc tataaattgt atcttagttt cttaccaata
     1261 tgataacact cgtttaggtt atatctgcat tgaagctcaa ttgatgatga atgttattag
     1321 acggatggtc ataatgtttg cgactgcgca taagatttcc cattcccacg cagatataaa
     1381 gcaataagat atttatatct tagagaacta tgttgctttc ataaaagatt cgttccttga
     1441 gatcttaaaa aaaatcagag cagatgtgtt aaaacttgtt cctcgagtag ctgcaacaat
     1501 aggagcttgg ctgcaacact agcaccaaat ttgtcctgcc taccaatata tattaaaccg
     1561 ttgataccta atgtgatcca ccactaattt gtagtggtag tggtgccgtt tattgttacc
     1621 ttgatttcaa cggtgctgga aaattacagt caaaacctga tgatgttggc cacaatggtg
     1681 aaggtgctgg tgtttgtttc acgactgtac acaatttatc taccgacatg atatctctgg
     1741 gtacactaca atgagagttc atcaatttct caatgaaaat ttgatctgta acttatagtt
     1801 aaattgtttt ggatgattag cagggttatg atgacatgca tataaaagat tgggattact
     1861 ttgcgctgtg gattactttc agaaccggag gagacttgat gttgacttat ctgatcagaa
     1921 atattggcac tgacggaaaa agtaattgct tagattacgt ttgcatttca tacctatttt
     1981 tcagtcataa acttttttgt atgtataatg caaatatttg ttcataaagt gaagttaggg
     2041 gtgaaggatt ggaaaaattg tattattgtt ataattgtca aaatagggag cgatatacaa
     2101 aacgagatac attaatgttt aatcggaagt ctccttcctt aatctcaatc ttcgaaacca
     2161 acgttatagc gcttat
//
LOCUS       XR_011757086            2182 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X2, ncRNA.
ACCESSION   XR_011757086
VERSION     XR_011757086.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2182
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..2182
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 tacacccact ctacccctca actcttcgca gattactccg acccaaacgc agatccgcag
       61 gtggtttaat cacaaggagg ttctccctgc aaaccataat aaggaccaag aggcaaataa
      121 gtatatgaca tgtaatggct gaattactat gaatgcccat gacaccctcc attctcgtca
      181 gttacacata tttcaatttc tgctaacgaa tctaggtgat gtttttttct atctccctta
      241 tcttttgatt tactgaaaac ccaatattta atgtggagtt gttctacaat atatatataa
      301 tctacagtat gcagtttttt tgttgtgatt atgttttcaa tgaaaatgac ggttctgata
      361 tatgggcatg gaattgaaat ttgttcattt gtggctcgtt gggggtttta tgctgttgat
      421 tcgggtttat tttgtctctt gttgtaaatg ttgtgggttt cgttgttggt ttgccaaaat
      481 atttattgaa ttgatggttc cgataggggg tcttatgggt ttccgtgccg gtttagaatt
      541 gagttcactt ttcgatgttg gtttatatca tggctcgtag aaacttacct tgctggtttg
      601 caaaatctgt ttagaattga cggttgcttt gttggattac attatgactt gtaaaacgag
      661 tcccttcttt gtgggtttca atgttgattt gccgaatttt gtttggaatt gacagttcaa
      721 tgtcggttta tatcgtgaat tgtagaagga ttcctttgtg ggaattggtt gatttgccaa
      781 aatctgtttg aaattgaagg ttttaataat gtgggtttat atcatggttt ttaaaaaaaa
      841 aaacgttctg caaggtttgc taaattctgt ttagtggcag tttagctgtc ggttcatatc
      901 gtggcttcaa caaaaagtcc cttgcgatgt tgggttacca aacactgttt agaataagat
      961 ggtttcaatg tgggttctta gctttattaa ggagttactt gtgggtttag atgtttgtct
     1021 agattgagat gtcgaggaaa atgctggttt cttaaacgtg gtttctatac gaggttatgt
     1081 ttattggcgt gatactggtt ttaactgcca ccaaatgctc ctccgtatac actgttctca
     1141 tatgttttat attgcttctg tttggatctg catttttttt tttttttttt ttttgcattc
     1201 agaagatcat ttggtcagca gatatttttc tataaattgt atcttagttt cttaccaata
     1261 tgataacact cgtttaggtt atatctgcat tgaagctcaa ttgatgatga atgttattag
     1321 acggatggtc ataatgtttg cgactgcgca taagatttcc cattcccacg cagatataaa
     1381 gcaataagat atttatatct tagagaacta tgttgctttc ataaaagatt cgttccttga
     1441 gatcttaaaa aaaatcagag cagatgtgtt aaaacttgtt cctcgagtag ctgcaacaat
     1501 aggagcttgg ctgcaacact agcaccaaat ttgtcctgcc taccaatata tattaaaccg
     1561 ttgataccta atgtgatcca ccactaattt gtagtggtag tggtgccgtt tattgttacc
     1621 ttgatttcaa cggtgctgga aaattacagt caaaacctga tgatgttgaa taggccacaa
     1681 tggtgaaggt gctggtgttt gtttcacgac tgtacacaat ttatctaccg acatgatatc
     1741 tctgggtaca ctacaatgag agttcatcaa tttctcaatg aaaatttgat ctgtaactta
     1801 tagttaaatt gttttggatg attagcaggg ttatgatgac atgcatataa aagattggga
     1861 ttactttgcg ctgtggatta ctttcagaac cggaggagac ttgatgttga cttatctgat
     1921 cagaaatatt ggcactgacg gaaaaagtaa ttgcttagat tacgtttgca tttcatacct
     1981 atttttcagt cataaacttt tttgtatgta taatgcaaat atttgttcat aaagtgaagt
     2041 taggggtgaa ggattggaaa aattgtatta ttgttataat tgtcaaaata gggagcgata
     2101 tacaaaacga gatacattaa tgtttaatcg gaagtctcct tccttaatct caatcttcga
     2161 aaccaacgtt atagcgctta ta
//
LOCUS       XR_011757087            1110 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X3, ncRNA.
ACCESSION   XR_011757087
VERSION     XR_011757087.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..1110
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 tacacccact ctacccctca actcttcgca gattactccg acccaaacgc agatccgcag
       61 gtggtttaat cacaaggagg ttctccctgc aaaccataat aaggaccaag aggcaaataa
      121 gtatatgaca tgtaatggct gaattactat gaatgcccat gacaccctcc attctcgtca
      181 gttacacata tttcaatttc tgctaacgaa tctaggttat atctgcattg aagctcaatt
      241 gatgatgaat gttattagac ggatggtcat aatgtttgcg actgcgcata agatttccca
      301 ttcccacgca gatataaagc aataagatat ttatatctta gagaactatg ttgctttcat
      361 aaaagattcg ttccttgaga tcttaaaaaa aatcagagca gatgtgttaa aacttgttcc
      421 tcgagtagct gcaacaatag gagcttggct gcaacactag caccaaattt gtcctgccta
      481 ccaatatata ttaaaccgtt gatacctaat gtgatccacc actaatttgt agtggtagtg
      541 gtgccgttta ttgttacctt gatttcaacg gtgctggaaa attacagtca aaacctgatg
      601 atgttggcca caatggtgaa ggtgctggtg tttgtttcac gactgtacac aatttatcta
      661 ccgacatgat atctctgggt acactacaat gagagttcat caatttctca atgaaaattt
      721 gatctgtaac ttatagttaa attgttttgg atgattagca gggttatgat gacatgcata
      781 taaaagattg ggattacttt gcgctgtgga ttactttcag aaccggagga gacttgatgt
      841 tgacttatct gatcagaaat attggcactg acggaaaaag taattgctta gattacgttt
      901 gcatttcata cctatttttc agtcataaac ttttttgtat gtataatgca aatatttgtt
      961 cataaagtga agttaggggt gaaggattgg aaaaattgta ttattgttat aattgtcaaa
     1021 atagggagcg atatacaaaa cgagatacat taatgtttaa tcggaagtct ccttccttaa
     1081 tctcaatctt cgaaaccaac gttatagcgc
//
LOCUS       XR_011757088            2534 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X4, ncRNA.
ACCESSION   XR_011757088
VERSION     XR_011757088.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2534
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..2534
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 cctatttttt taattttttt tcttcaactt tgtacgctgt gtcttcttta tcatcgtctt
       61 cttttgattt tgttaagttg tatcatacgg gattaggggt tcttttttta tttatttatt
      121 ttttttaatt ctgatgttgt caaaatctat aaaaactagg atttttgttt tttatttgtc
      181 gaatttaggg ttttttttcc tgatcttgtt tagtttctta aatttctggg atttttatct
      241 gattttgtta agatgattag acacaccgca tacactctct cccctcattc actgctgata
      301 ttatcccaac ccaatcgtcg gtggtttaat cacaaggtct tatgatgatg ctgttaattg
      361 tttatacaat tagggctttt tctttttatc ttcttgagaa ttatactacg aaatttaggg
      421 tttctattaa atcggaggtt ctccctgcaa accataataa ggaccaagag gcaaataagt
      481 atatgacatg taatggctga attactatga atgcccatga caccctccat tctcgtcagt
      541 tacacatatt tcaatttctg ctaacgaatc taggtgatgt ttttttctat ctcccttatc
      601 ttttgattta ctgaaaaccc aatatttaat gtggagttgt tctacaatat atatataatc
      661 tacagtatgc agtttttttg ttgtgattat gttttcaatg aaaatgacgg ttctgatata
      721 tgggcatgga attgaaattt gttcatttgt ggctcgttgg gggttttatg ctgttgattc
      781 gggtttattt tgtctcttgt tgtaaatgtt gtgggtttcg ttgttggttt gccaaaatat
      841 ttattgaatt gatggttccg atagggggtc ttatgggttt ccgtgccggt ttagaattga
      901 gttcactttt cgatgttggt ttatatcatg gctcgtagaa acttaccttg ctggtttgca
      961 aaatctgttt agaattgacg gttgctttgt tggattacat tatgacttgt aaaacgagtc
     1021 ccttctttgt gggtttcaat gttgatttgc cgaattttgt ttggaattga cagttcaatg
     1081 tcggtttata tcgtgaattg tagaaggatt cctttgtggg aattggttga tttgccaaaa
     1141 tctgtttgaa attgaaggtt ttaataatgt gggtttatat catggttttt aaaaaaaaaa
     1201 acgttctgca aggtttgcta aattctgttt agtggcagtt tagctgtcgg ttcatatcgt
     1261 ggcttcaaca aaaagtccct tgcgatgttg ggttaccaaa cactgtttag aataagatgg
     1321 tttcaatgtg ggttcttagc tttattaagg agttacttgt gggtttagat gtttgtctag
     1381 attgagatgt cgaggaaaat gctggtttct taaacgtggt ttctatacga ggttatgttt
     1441 attggcgtga tactggtttt aactgccacc aaatgctcct ccgtatacac tgttctcata
     1501 tgttttatat tgcttctgtt tggatctgca tttttttttt tttttttttt ttgcattcag
     1561 aagatcattt ggtcagcaga tatttttcta taaattgtat cttagtttct taccaatatg
     1621 ataacactcg tttaggttat atctgcattg aagctcaatt gatgatgaat gttattagac
     1681 ggatggtcat aatgtttgcg actgcgcata agatttccca ttcccacgca gatataaagc
     1741 aataagatat ttatatctta gagaactatg ttgctttcat aaaagattcg ttccttgaga
     1801 tcttaaaaaa aatcagagca gatgtgttaa aacttgttcc tcgagtagct gcaacaatag
     1861 gagcttggct gcaacactag caccaaattt gtcctgccta ccaatatata ttaaaccgtt
     1921 gatacctaat gtgatccacc actaatttgt agtggtagtg gtgccgttta ttgttacctt
     1981 gatttcaacg gtgctggaaa attacagtca aaacctgatg atgttggcca caatggtgaa
     2041 ggtgctggtg tttgtttcac gactgtacac aatttatcta ccgacatgat atctctgggt
     2101 acactacaat gagagttcat caatttctca atgaaaattt gatctgtaac ttatagttaa
     2161 attgttttgg atgattagca gggttatgat gacatgcata taaaagattg ggattacttt
     2221 gcgctgtgga ttactttcag aaccggagga gacttgatgt tgacttatct gatcagaaat
     2281 attggcactg acggaaaaag taattgctta gattacgttt gcatttcata cctatttttc
     2341 agtcataaac ttttttgtat gtataatgca aatatttgtt cataaagtga agttaggggt
     2401 gaaggattgg aaaaattgta ttattgttat aattgtcaaa atagggagcg atatacaaaa
     2461 cgagatacat taatgtttaa tcggaagtct ccttccttaa tctcaatctt cgaaaccaac
     2521 gttatagcgc ttat
//
LOCUS       XR_011757089            2436 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X5, ncRNA.
ACCESSION   XR_011757089
VERSION     XR_011757089.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2436
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..2436
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 cctatttttt taattttttt tcttcaactt tgtacgctgt gtcttcttta tcatcgtctt
       61 cttttgattt tgttaagttg tatcatacgg gattaggggt tcttttttta tttatttatt
      121 ttttttaatt ctgatgttgt caaaatctat aaaaactagg atttttgttt tttatttgtc
      181 gaatttaggg ttttttttcc tgatcttgtt tagtttctta aatttctggg atttttatct
      241 gattttgtta agatgattag acacaccgca tacactctct cccctcattc actgctgata
      301 ttatcccaac ccaatcgtcg gtggtttaat cacaaggagg ttctccctgc aaaccataat
      361 aaggaccaag aggcaaataa gtatatgaca tgtaatggct gaattactat gaatgcccat
      421 gacaccctcc attctcgtca gttacacata tttcaatttc tgctaacgaa tctaggtgat
      481 gtttttttct atctccctta tcttttgatt tactgaaaac ccaatattta atgtggagtt
      541 gttctacaat atatatataa tctacagtat gcagtttttt tgttgtgatt atgttttcaa
      601 tgaaaatgac ggttctgata tatgggcatg gaattgaaat ttgttcattt gtggctcgtt
      661 gggggtttta tgctgttgat tcgggtttat tttgtctctt gttgtaaatg ttgtgggttt
      721 cgttgttggt ttgccaaaat atttattgaa ttgatggttc cgataggggg tcttatgggt
      781 ttccgtgccg gtttagaatt gagttcactt ttcgatgttg gtttatatca tggctcgtag
      841 aaacttacct tgctggtttg caaaatctgt ttagaattga cggttgcttt gttggattac
      901 attatgactt gtaaaacgag tcccttcttt gtgggtttca atgttgattt gccgaatttt
      961 gtttggaatt gacagttcaa tgtcggttta tatcgtgaat tgtagaagga ttcctttgtg
     1021 ggaattggtt gatttgccaa aatctgtttg aaattgaagg ttttaataat gtgggtttat
     1081 atcatggttt ttaaaaaaaa aaacgttctg caaggtttgc taaattctgt ttagtggcag
     1141 tttagctgtc ggttcatatc gtggcttcaa caaaaagtcc cttgcgatgt tgggttacca
     1201 aacactgttt agaataagat ggtttcaatg tgggttctta gctttattaa ggagttactt
     1261 gtgggtttag atgtttgtct agattgagat gtcgaggaaa atgctggttt cttaaacgtg
     1321 gtttctatac gaggttatgt ttattggcgt gatactggtt ttaactgcca ccaaatgctc
     1381 ctccgtatac actgttctca tatgttttat attgcttctg tttggatctg catttttttt
     1441 tttttttttt ttttgcattc agaagatcat ttggtcagca gatatttttc tataaattgt
     1501 atcttagttt cttaccaata tgataacact cgtttaggtt atatctgcat tgaagctcaa
     1561 ttgatgatga atgttattag acggatggtc ataatgtttg cgactgcgca taagatttcc
     1621 cattcccacg cagatataaa gcaataagat atttatatct tagagaacta tgttgctttc
     1681 ataaaagatt cgttccttga gatcttaaaa aaaatcagag cagatgtgtt aaaacttgtt
     1741 cctcgagtag ctgcaacaat aggagcttgg ctgcaacact agcaccaaat ttgtcctgcc
     1801 taccaatata tattaaaccg ttgataccta atgtgatcca ccactaattt gtagtggtag
     1861 tggtgccgtt tattgttacc ttgatttcaa cggtgctgga aaattacagt caaaacctga
     1921 tgatgttggc cacaatggtg aaggtgctgg tgtttgtttc acgactgtac acaatttatc
     1981 taccgacatg atatctctgg gtacactaca atgagagttc atcaatttct caatgaaaat
     2041 ttgatctgta acttatagtt aaattgtttt ggatgattag cagggttatg atgacatgca
     2101 tataaaagat tgggattact ttgcgctgtg gattactttc agaaccggag gagacttgat
     2161 gttgacttat ctgatcagaa atattggcac tgacggaaaa agtaattgct tagattacgt
     2221 ttgcatttca tacctatttt tcagtcataa acttttttgt atgtataatg caaatatttg
     2281 ttcataaagt gaagttaggg gtgaaggatt ggaaaaattg tattattgtt ataattgtca
     2341 aaatagggag cgatatacaa aacgagatac attaatgttt aatcggaagt ctccttcctt
     2401 aatctcaatc ttcgaaacca acgttatagc gcttat
//
LOCUS       XR_011757090            2170 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X6, ncRNA.
ACCESSION   XR_011757090
VERSION     XR_011757090.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2170
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..2170
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 gattactccg acccaaacgc agatccgcag gtggtttaat cacaaggtcg ttcttttttt
       61 tcttcttaag gaggttctcc ctgcaaacca taataaggac caagaggcaa ataagtatat
      121 gacatgtaat ggctgaatta ctatgaatgc ccatgacacc ctccattctc gtcagttaca
      181 catatttcaa tttctgctaa cgaatctagg tgatgttttt ttctatctcc cttatctttt
      241 gatttactga aaacccaata tttaatgtgg agttgttcta caatatatat ataatctaca
      301 gtatgcagtt tttttgttgt gattatgttt tcaatgaaaa tgacggttct gatatatggg
      361 catggaattg aaatttgttc atttgtggct cgttgggggt tttatgctgt tgattcgggt
      421 ttattttgtc tcttgttgta aatgttgtgg gtttcgttgt tggtttgcca aaatatttat
      481 tgaattgatg gttccgatag ggggtcttat gggtttccgt gccggtttag aattgagttc
      541 acttttcgat gttggtttat atcatggctc gtagaaactt accttgctgg tttgcaaaat
      601 ctgtttagaa ttgacggttg ctttgttgga ttacattatg acttgtaaaa cgagtccctt
      661 ctttgtgggt ttcaatgttg atttgccgaa ttttgtttgg aattgacagt tcaatgtcgg
      721 tttatatcgt gaattgtaga aggattcctt tgtgggaatt ggttgatttg ccaaaatctg
      781 tttgaaattg aaggttttaa taatgtgggt ttatatcatg gtttttaaaa aaaaaaacgt
      841 tctgcaaggt ttgctaaatt ctgtttagtg gcagtttagc tgtcggttca tatcgtggct
      901 tcaacaaaaa gtcccttgcg atgttgggtt accaaacact gtttagaata agatggtttc
      961 aatgtgggtt cttagcttta ttaaggagtt acttgtgggt ttagatgttt gtctagattg
     1021 agatgtcgag gaaaatgctg gtttcttaaa cgtggtttct atacgaggtt atgtttattg
     1081 gcgtgatact ggttttaact gccaccaaat gctcctccgt atacactgtt ctcatatgtt
     1141 ttatattgct tctgtttgga tctgcatttt tttttttttt ttttttttgc attcagaaga
     1201 tcatttggtc agcagatatt tttctataaa ttgtatctta gtttcttacc aatatgataa
     1261 cactcgttta ggttatatct gcattgaagc tcaattgatg atgaatgtta ttagacggat
     1321 ggtcataatg tttgcgactg cgcataagat ttcccattcc cacgcagata taaagcaata
     1381 agatatttat atcttagaga actatgttgc tttcataaaa gattcgttcc ttgagatctt
     1441 aaaaaaaatc agagcagatg tgttaaaact tgttcctcga gtagctgcaa caataggagc
     1501 ttggctgcaa cactagcacc aaatttgtcc tgcctaccaa tatatattaa accgttgata
     1561 cctaatgtga tccaccacta atttgtagtg gtagtggtgc cgtttattgt taccttgatt
     1621 tcaacggtgc tggaaaatta cagtcaaaac ctgatgatgt tggccacaat ggtgaaggtg
     1681 ctggtgtttg tttcacgact gtacacaatt tatctaccga catgatatct ctgggtacac
     1741 tacaatgaga gttcatcaat ttctcaatga aaatttgatc tgtaacttat agttaaattg
     1801 ttttggatga ttagcagggt tatgatgaca tgcatataaa agattgggat tactttgcgc
     1861 tgtggattac tttcagaacc ggaggagact tgatgttgac ttatctgatc agaaatattg
     1921 gcactgacgg aaaaagtaat tgcttagatt acgtttgcat ttcataccta tttttcagtc
     1981 ataaactttt ttgtatgtat aatgcaaata tttgttcata aagtgaagtt aggggtgaag
     2041 gattggaaaa attgtattat tgttataatt gtcaaaatag ggagcgatat acaaaacgag
     2101 atacattaat gtttaatcgg aagtctcctt ccttaatctc aatcttcgaa accaacgtta
     2161 tagcgcttat
//
LOCUS       XR_011757091            1018 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X7, ncRNA.
ACCESSION   XR_011757091
VERSION     XR_011757091.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1018
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..1018
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 aggtggttta atcacaagga ggttctccct gcaaaccata ataaggacca agaggcaaat
       61 aaggatgatg tgtagtagca gggcaaatta tatttggccc tgttatcttg atctttaatt
      121 taagttatat ctgcattgaa gctcaattga tgatgaatgt tattagacgg atggtcataa
      181 tgtttgcgac tgcgcataag atttcccatt cccacgcaga tataaagcaa taagatattt
      241 atatcttaga gaactatgtt gctttcataa aagattcgtt ccttgagatc ttaaaaaaaa
      301 tcagagcaga tgtgttaaaa cttgttcctc gagtagctgc aacaatagga gcttggctgc
      361 aacactagca ccaaatttgt cctgcctacc aatatatatt aaaccgttga tacctaatgt
      421 gatccaccac taatttgtag tggtagtggt gccgtttatt gttaccttga tttcaacggt
      481 gctggaaaat tacagtcaaa acctgatgat gttggccaca atggtgaagg tgctggtgtt
      541 tgtttcacga ctgtacacaa tttatctacc gacatgatat ctctgggtac actacaatga
      601 gagttcatca atttctcaat gaaaatttga tctgtaactt atagttaaat tgttttggat
      661 gattagcagg gttatgatga catgcatata aaagattggg attactttgc gctgtggatt
      721 actttcagaa ccggaggaga cttgatgttg acttatctga tcagaaatat tggcactgac
      781 ggaaaaagta attgcttaga ttacgtttgc atttcatacc tatttttcag tcataaactt
      841 ttttgtatgt ataatgcaaa tatttgttca taaagtgaag ttaggggtga aggattggaa
      901 aaattgtatt attgttataa ttgtcaaaat agggagcgat atacaaaacg agatacatta
      961 atgtttaatc ggaagtctcc ttccttaatc tcaatcttcg aaaccaacgt tatagcgc
//
LOCUS       XR_011757092            1024 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X8, ncRNA.
ACCESSION   XR_011757092
VERSION     XR_011757092.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1024
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..1024
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 tggtttaatc acaaggaggt tctccctgca aaccataata aggaccaaga ggcaaataag
       61 ttttgcagga tgatgtgtag tagcagggca aattatattt ggccctgtta tcttgatctt
      121 taatttaagt tatatctgca ttgaagctca attgatgatg aatgttatta gacggatggt
      181 cataatgttt gcgactgcgc ataagatttc ccattcccac gcagatataa agcaataaga
      241 tatttatatc ttagagaact atgttgcttt cataaaagat tcgttccttg agatcttaaa
      301 aaaaatcaga gcagatgtgt taaaacttgt tcctcgagta gctgcaacaa taggagcttg
      361 gctgcaacac tagcaccaaa tttgtcctgc ctaccaatat atattaaacc gttgatacct
      421 aatgtgatcc accactaatt tgtagtggta gtggtgccgt ttattgttac cttgatttca
      481 acggtgctgg aaaattacag tcaaaacctg atgatgttgg ccacaatggt gaaggtgctg
      541 gtgtttgttt cacgactgta cacaatttat ctaccgacat gatatctctg ggtacactac
      601 aatgagagtt catcaatttc tcaatgaaaa tttgatctgt aacttatagt taaattgttt
      661 tggatgatta gcagggttat gatgacatgc atataaaaga ttgggattac tttgcgctgt
      721 ggattacttt cagaaccgga ggagacttga tgttgactta tctgatcaga aatattggca
      781 ctgacggaaa aagtaattgc ttagattacg tttgcatttc atacctattt ttcagtcata
      841 aacttttttg tatgtataat gcaaatattt gttcataaag tgaagttagg ggtgaaggat
      901 tggaaaaatt gtattattgt tataattgtc aaaataggga gcgatataca aaacgagata
      961 cattaatgtt taatcggaag tctccttcct taatctcaat cttcgaaacc aacgttatag
     1021 cgct
//
LOCUS       XR_011757093            1024 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X9, ncRNA.
ACCESSION   XR_011757093
VERSION     XR_011757093.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1024
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..1024
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 ttttttcttc ttaaggaggt tctccctgca aaccataata aggaccaaga ggcaaataag
       61 ttttgcagga tgatgtgtag tagcagggca aattatattt ggccctgtta tcttgatctt
      121 taatttaagt tatatctgca ttgaagctca attgatgatg aatgttatta gacggatggt
      181 cataatgttt gcgactgcgc ataagatttc ccattcccac gcagatataa agcaataaga
      241 tatttatatc ttagagaact atgttgcttt cataaaagat tcgttccttg agatcttaaa
      301 aaaaatcaga gcagatgtgt taaaacttgt tcctcgagta gctgcaacaa taggagcttg
      361 gctgcaacac tagcaccaaa tttgtcctgc ctaccaatat atattaaacc gttgatacct
      421 aatgtgatcc accactaatt tgtagtggta gtggtgccgt ttattgttac cttgatttca
      481 acggtgctgg aaaattacag tcaaaacctg atgatgttgg ccacaatggt gaaggtgctg
      541 gtgtttgttt cacgactgta cacaatttat ctaccgacat gatatctctg ggtacactac
      601 aatgagagtt catcaatttc tcaatgaaaa tttgatctgt aacttatagt taaattgttt
      661 tggatgatta gcagggttat gatgacatgc atataaaaga ttgggattac tttgcgctgt
      721 ggattacttt cagaaccgga ggagacttga tgttgactta tctgatcaga aatattggca
      781 ctgacggaaa aagtaattgc ttagattacg tttgcatttc atacctattt ttcagtcata
      841 aacttttttg tatgtataat gcaaatattt gttcataaag tgaagttagg ggtgaaggat
      901 tggaaaaatt gtattattgt tataattgtc aaaataggga gcgatataca aaacgagata
      961 cattaatgtt taatcggaag tctccttcct taatctcaat cttcgaaacc aacgttatag
     1021 cgct
//
LOCUS       XR_011757094            2213 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X10, ncRNA.
ACCESSION   XR_011757094
VERSION     XR_011757094.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2213
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..2213
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 tacacccact ctacccctca actcttcgca gattactccg acccaaacgc agatccgcag
       61 gtggtttaat cacaaggagg ttctccctgc aaaccataat aaggaccaag aggcaaataa
      121 gtatatgaca tgtaatggct gaattactat gaatgcccat gacaccctcc attctcgtca
      181 gttacacata tttcaatttc tgctaacgaa tctaggtgat gtttttttct atctccctta
      241 tcttttgatt tactgaaaac ccaatattta atgtggagtt gttctacaat atatatataa
      301 tctacagtat gcagtttttt tgttgtgatt atgttttcaa tgaaaatgac ggttctgata
      361 tatgggcatg gaattgaaat ttgttcattt gtggctcgtt gggggtttta tgctgttgat
      421 tcgggtttat tttgtctctt gttgtaaatg ttgtgggttt cgttgttggt ttgccaaaat
      481 atttattgaa ttgatggttc cgataggggg tcttatgggt ttccgtgccg gtttagaatt
      541 gagttcactt ttcgatgttg gtttatatca tggctcgtag aaacttacct tgctggtttg
      601 caaaatctgt ttagaattga cggttgcttt gttggattac attatgactt gtaaaacgag
      661 tcccttcttt gtgggtttca atgttgattt gccgaatttt gtttggaatt gacagttcaa
      721 tgtcggttta tatcgtgaat tgtagaagga ttcctttgtg ggaattggtt gatttgccaa
      781 aatctgtttg aaattgaagg ttttaataat gtgggtttat atcatggttt ttaaaaaaaa
      841 aaacgttctg caaggtttgc taaattctgt ttagtggcag tttagctgtc ggttcatatc
      901 gtggcttcaa caaaaagtcc cttgcgatgt tgggttacca aacactgttt agaataagat
      961 ggtttcaatg tgggttctta gctttattaa ggagttactt gtgggtttag atgtttgtct
     1021 agattgagat gtcgaggaaa atgctggttt cttaaacgtg gtttctatac gaggttatgt
     1081 ttattggcgt gatactggtt ttaactgcca ccaaatgctc ctccgtatac actgttctca
     1141 tatgttttat attgcttctg tttggatctg catttttttt tttttttttt ttttgcattc
     1201 agaagatcat ttggtcagca gatatttttc tataaattgt atcttagttt cttaccaata
     1261 tgataacact cgtttaggtt atatctgcat tgaagctcaa ttgatgatga atgttattag
     1321 acggatggtc ataatgtttg cgactgcgca taagatttcc cattcccacg cagatataaa
     1381 gcaataagat atttatatct tagagaacta tgttgctttc ataaaagatt cgttccttga
     1441 gatcttaaaa aaaatcagag cagatgtgtt aaaacttgtt cctcgagtag ctgcaacaat
     1501 aggagcttgg ctgcaacact agcaccaaat ttgtcctgcc taccaatata tattaaaccg
     1561 ttgataccta atgtgatcca ccactaattt gtagtggtag tggtgccgtt tattgttacc
     1621 ttgatttcaa cggtgctgga aaattacagt caaaacctga tgatgttggc cacaatggtg
     1681 aaggtgctgg tgtttgtttc acgactgtac acaatttatc taccgacatg atatctctgg
     1741 gtacactaca atgagagttc atcaatttct caatgaaaat ttgatctgta acttatagtt
     1801 aaattgtttt ggatgattag cagggttatg atgacatgca tataaaagat tgggattact
     1861 ttgcgctgtg gattactttc agaaccggag gagacttgat gttgacttat ctgatcagaa
     1921 atattggcac tgacggaaaa acttgacaag aaaccaactt ttgtcatccg gaaagatgga
     1981 tttcttgatg ccgtggtgtg gagtccatgt gattagaatg aaaatgtgat ttaggagacg
     2041 atgaatacaa acaaatgctt tgtgtggaag ctgcagcaag ttgaaaaacc tattacataa
     2101 aagcctgacg aaaatttgag aggaaggtgt taagttggaa aatcctatga ttatggttac
     2161 gtgtattcca ttctttattc tttatatagt taataataat taccctttaa gtc
//
LOCUS       XR_011757095            2171 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839818), transcript variant X11, ncRNA.
ACCESSION   XR_011757095
VERSION     XR_011757095.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2171
                     /gene="LOC139839818"
                     /note="uncharacterized LOC139839818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839818"
     ncRNA           1..2171
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839818"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /db_xref="GeneID:139839818"
ORIGIN      
        1 tacacccact ctacccctca actcttcgca gattactccg acccaaacgc agatccgcag
       61 gtggtttaat cacaaggagg ttctccctgc aaaccataat aaggaccaag aggcaaataa
      121 gtatatgaca tgtaatggct gaattactat gaatgcccat gacaccctcc attctcgtca
      181 gttacacata tttcaatttc tgctaacgaa tctaggtgat gtttttttct atctccctta
      241 tcttttgatt tactgaaaac ccaatattta atgtggagtt gttctacaat atatatataa
      301 tctacagtat gcagtttttt tgttgtgatt atgttttcaa tgaaaatgac ggttctgata
      361 tatgggcatg gaattgaaat ttgttcattt gtggctcgtt gggggtttta tgctgttgat
      421 tcgggtttat tttgtctctt gttgtaaatg ttgtgggttt cgttgttggt ttgccaaaat
      481 atttattgaa ttgatggttc cgataggggg tcttatgggt ttccgtgccg gtttagaatt
      541 gagttcactt ttcgatgttg gtttatatca tggctcgtag aaacttacct tgctggtttg
      601 caaaatctgt ttagaattga cggttgcttt gttggattac attatgactt gtaaaacgag
      661 tcccttcttt gtgggtttca atgttgattt gccgaatttt gtttggaatt gacagttcaa
      721 tgtcggttta tatcgtgaat tgtagaagga ttcctttgtg ggaattggtt gatttgccaa
      781 aatctgtttg aaattgaagg ttttaataat gtgggtttat atcatggttt ttaaaaaaaa
      841 aaacgttctg caaggtttgc taaattctgt ttagtggcag tttagctgtc ggttcatatc
      901 gtggcttcaa caaaaagtcc cttgcgatgt tgggttacca aacactgttt agaataagat
      961 ggtttcaatg tgggttctta gctttattaa ggagttactt gtgggtttag atgtttgtct
     1021 agattgagat gtcgaggaaa atgctggttt cttaaacgtg gtttctatac gaggttatgt
     1081 ttattggcgt gatactggtt ttaactgcca ccaaatgctc ctccgtatac actgttctca
     1141 tatgttttat attgcttctg tttggatctg catttttttt tttttttttt ttttgcattc
     1201 agaagatcat ttggtcagca gatatttttc tataaattgt atcttagttt cttaccaata
     1261 tgataacact cgtttaggtt atatctgcat tgaagctcaa ttgatgatga atgttattag
     1321 acggatggtc ataatgtttg cgactgcgca taagatttcc cattcccacg cagatataaa
     1381 gcaataagat atttatatct tagagaacta tgttgctttc ataaaagatt cgttccttga
     1441 gatcttaaaa aaaatcagag cagatgtgtt aaaacttgtt cctcgagtag ctgcaacaat
     1501 aggagcttgg ctgcaacact agcaccaaat ttgtcctgcc taccaatata tattaaaccg
     1561 ttgataccta atgtgatcca ccactaattt gtagtggtag tggtgccgtt tattgttacc
     1621 ttgatttcaa cggtgctgga aaattacagt caaaacctga tgatgttggc cacaatggtg
     1681 aaggtgctgg tgtttgtttc acgactgtac acaatttatc taccgacatg atatctctgg
     1741 gtacactaca atgagagttc atcaatttct caatgaaaat ttgatctgta acttatagtt
     1801 aaattgtttt ggatgattag cagggttatg atgacatgca tataaaagat tgggattact
     1861 ttgcgctgtg gattactttc agaaccggag gagacttgat gttgacttat ctgatcagaa
     1921 atattggcac tgacggaaaa acttgacaag aaaccaactt ttgtcatccg gaaagatgga
     1981 tttcttgatg ccggagacga tgaatacaaa caaatgcttt gtgtggaagc tgcagcaagt
     2041 tgaaaaacct attacataaa agcctgacga aaatttgaga ggaaggtgtt aagttggaaa
     2101 atcctatgat tatggttacg tgtattccat tctttattct ttatatagtt aataataatt
     2161 accctttaag t
//
LOCUS       XM_071829983            3440 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides plasma membrane ATPase
            4-like (LOC139839819), mRNA.
ACCESSION   XM_071829983
VERSION     XM_071829983.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3440
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3440
                     /gene="LOC139839819"
                     /note="plasma membrane ATPase 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 84
                     Proteins"
                     /db_xref="GeneID:139839819"
     CDS             193..3066
                     /gene="LOC139839819"
                     /codon_start=1
                     /product="plasma membrane ATPase 4-like"
                     /protein_id="XP_071686084.1"
                     /db_xref="GeneID:139839819"
                     /translation="MGVENAFSLEGIKNETVDLEKVPIEEVFEQLKCNREGLSSDEGN
                     QRLEIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAVMAIALANGGGKAPDWQDFV
                     GIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIIS
                     IKLGDIVPADARLLEGDALKIDQSALTGESLPVTKNPYDEVFSGSTCKQGELEAVVIA
                     TGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVVEIIVMYPIQHRPYR
                     KGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD
                     KTGTLTLNKLSVDKNLIEVFAKGLDKEQVLLYAARASRTENQDAIDAAIVGTLADPKE
                     ARAGVREVHFFPFNPVDKRTAMTYIDGSGNWFRASKGAPEQILTLCGCKEDQKKKVHA
                     MIDKFAERGLRSLGVARQEVPQKSKDSAGGPWEFVGLLSLFDPPRHDSAETIRRALNL
                     GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGGHKDESIAALPVDELIEKADGF
                     AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV
                     LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVL
                     IIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFYIMKDTD
                     FFSEKFHVKSLRHSVHAEYEMMAALYLQVSIVSQALIFVTRSRSWSFVERPGFLLMGA
                     FLAAQLVATLIAVYANWEFARIKGIGWKWAGVIWLYSIVFYFPLDVMKFAIRYILSGK
                     AWLSMIDNRTAFTTKQDFGRGEREAQWAHAQRTLHGLQAPDTSNLFNEKSSYRELSEI
                     AEQAKRRAEVARLREVLTLKGHVESVVKLKGLDIDTIQQHYTV"
     misc_feature    301..2628
                     /gene="LOC139839819"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     Region: ATPase-IIIA_H; TIGR01647"
                     /db_xref="CDD:273731"
     polyA_site      3440
                     /gene="LOC139839819"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcactcccc ctctctcttc atagctatat atatatacat tttctctctg gagtttgcaa
       61 acaaattaat caaacaccat ttattgaatc aggagcatct cattcatgtt tccagtaacc
      121 actctctatt tataaaatcg aaattgtgtc cgctacctgc tctttaacta gtaacttatc
      181 ggagtcttaa taatgggcgt tgaaaatgcc tttagtctcg aaggaatcaa aaatgaaacc
      241 gtcgatctgg aaaaagtacc tattgaagag gtgtttgagc agttgaaatg taaccgtgaa
      301 ggtctgagct ccgatgaagg aaaccaaagg cttgaaattt tcggacctaa caagttggag
      361 gagaagaagg aaagcaaatt tctcaagttt ctcgggttta tgtggaatcc tctctcatgg
      421 gtcatggaag ctgcagccgt tatggctatt gcgttggcca atggcggcgg caaggcacca
      481 gattggcaag attttgttgg tatcgtttgt ttgctcgtta tcaactccac tatcagtttc
      541 atcgaagaaa acaatgccgg aaatgctgct gctgccctta tggctggtct cgcacctaaa
      601 actaaagttc tgagggacgg tcgatggagt gaacaagagg ctgccatatt ggttcctgga
      661 gatattataa gtatcaaact tggtgatatt gtaccagctg acgcgcgtct tcttgaaggt
      721 gatgctttaa agattgacca atctgccctt actggtgaat ctctcccagt caccaagaac
      781 ccatacgacg aggtgttctc tggttcaacc tgcaagcaag gtgaacttga agcagttgtc
      841 attgcaactg gggtccacac cttttttgga aaggctgcgc atcttgtgga tagcacaaac
      901 caagttggtc acttccaaaa ggttctaaca gccatcggaa acttctgcat ctgctcgatt
      961 gctgttggaa tggttgtcga gattatcgtc atgtacccga tccaacaccg accgtataga
     1021 aaaggaatcg acaatctttt ggtgttgctt attggaggaa ttccaattgc tatgcctact
     1081 gttctttcgg ttaccatggc tattggctcc cacaggcttt cgcaacaagg tgctattaca
     1141 aagagaatga ctgcaatcga agaaatggcg ggaatggatg ttctttgtag tgacaagacc
     1201 ggaactttga cacttaacaa actttcggtt gataagaatt taatcgaagt tttcgctaaa
     1261 ggtttggata aggaacaggt tttgctttac gctgcacgag cttctaggac cgaaaaccaa
     1321 gatgctattg atgccgctat tgttggtacc cttgctgacc ccaaagaggc acgagctggc
     1381 gttagagagg ttcatttctt cccgtttaac cctgttgata agaggactgc catgacttac
     1441 attgatggaa gcggaaactg gtttagagct agcaaaggtg caccagaaca gattttgacc
     1501 ctttgtgggt gcaaagaaga ccaaaagaag aaagttcacg caatgattga taaattcgca
     1561 gaacgtggtc tgcgatcttt gggtgttgca agacaggaag taccacaaaa gtcaaaggat
     1621 agcgccggtg gtccatggga attcgttggg ttgttgtccc tctttgatcc accgagacat
     1681 gacagcgctg aaaccatccg aagagctctc aatctcggtg taaatgtcaa gatgattact
     1741 ggtgatcaac ttgccatcgc taaggaaacg ggaagaaggc ttggtatggg aacaaacatg
     1801 tacccatctt catctttact cggtggacac aaggatgaat cgattgcagc gctacctgtt
     1861 gacgagttga tcgagaaggc cgatggattt gccggagttt tccccgagca taagtatgaa
     1921 attgtgaaga aactacaaga aaggaagcat atttgtggga tgactggaga tggtgtgaac
     1981 gatgcccctg ctttaaagaa agccgatatt ggaattgcgg ttgctgatgc aaccgatgcc
     2041 gcaagaggtg cttccgacat cgtgcttact gaacccggtc ttagtgttat tattagtgct
     2101 gttcttacca gcagagctat tttccaaaga atgaaaaatt acacaatcta tgcagtttca
     2161 atcaccattc gtattgtgtt tggattcatg ttcatcgctt tgatatggaa gtttgacttt
     2221 tctcccttca tggttcttat cattgcaatt cttaatgacg gaactatcat gacaatatca
     2281 aaggatagag tgaagccatc tccattacct gatagctgga aactaaaaga aatatttgcc
     2341 accggtgttg tgctcggagg ctacttagct ttaatgacag ttatcttctt ctatatcatg
     2401 aaagataccg actttttctc ggaaaagttt catgtgaaat ctctgaggca cagtgtacac
     2461 gctgaatacg agatgatggc tgctttatat ttgcaagtca gtattgtaag ccaggctctt
     2521 atctttgtca cccggtctcg cagctggtcg tttgtagaac gtcctgggtt cttactgatg
     2581 ggtgctttct tagctgcaca attggtagca acattgattg cagtatacgc aaactgggaa
     2641 tttgcaagaa tcaagggtat cgggtggaaa tgggctggtg ttatctggct ttacagcatt
     2701 gtattctatt tccctctcga tgttatgaag tttgccattc gatatatcct tagtggaaag
     2761 gcctggctca gcatgattga taacaggact gcattcacaa caaagcaaga ttttggaaga
     2821 ggggagagag aggcccagtg ggctcatgct cagaggactc tacatgggct tcaagcaccc
     2881 gatacatcaa atctcttcaa tgagaagagt agctatagag aactttcgga aattgctgaa
     2941 caggccaaaa gacgtgctga agttgcaagg cttcgggagg tacttacact caagggtcac
     3001 gttgagtcag ttgtgaaact gaaggggcta gacatcgaca caattcaaca acattataca
     3061 gtatgagaaa cttttgataa gggaaatggg tcgatttttt tttttttttt ttacctttta
     3121 atttattacc aaatcgaggc gtactagaag accatgttac taccatggga agacatgcta
     3181 tgtgctgcaa tgcagcctcg agtctttata atttgtgtta tattgtgaat ttcttgaata
     3241 ttactcataa aagtgtttgg tcgctttgta ctcgttagaa gtgaagcaaa gttgatcctt
     3301 tttttctgta atgtagtttc ttttctcccc ccttgacact gttttgtacc cgtacccctt
     3361 tgtttgaatg aatcaatgta atgaaatgaa caaaaccaat ggtgaaattg gtgcttgtaa
     3421 tctacaagtt ttacgtgcaa
//
LOCUS       XM_071829984            1362 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            alpha-1,3-arabinosyltransferase XAT2-like (LOC139839820), mRNA.
ACCESSION   XM_071829984
VERSION     XM_071829984.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1362
                     /gene="LOC139839820"
                     /note="alpha-1,3-arabinosyltransferase XAT2-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839820"
     CDS             1..1362
                     /gene="LOC139839820"
                     /codon_start=1
                     /product="alpha-1,3-arabinosyltransferase XAT2-like"
                     /protein_id="XP_071686085.1"
                     /db_xref="GeneID:139839820"
                     /translation="MTYDEMFARSFSRRDQIRLKYSAFAACFVVACCLCTVFKPYLGP
                     LPALNLRLTMADGLQLAMITDKTGEPKRPYSEVQQTSLTCDISKHRSDTCEIKGDVRI
                     KGTSSLIFVASSHNKNASFIIKPYARNGDKSAMDLVTTFTLKSVENQPEIMPECNKTH
                     NVPAVVFSIGGYANNNFHAFTDVIIPLYATSRKFNGEVKFLVSNKLPRWTSKFKVVLD
                     KLSRYETIDIDRENIVHCFPSMIVGLKKEHTKELHYESMKDFRNFLRNSYSLERSMVI
                     KLNNSSIQKARLLIISRQKTRAFTNVEDVVLAAENMGFEVIVSEMSANMTHISRLVNS
                     CDVLIGVHGAGLTNMVFLPENGVIIQVVPFGKMEWLASTYFGEPSKEMGLKYLEYKIS
                     EDESSLIQEYPLKHQVFVDPYSVQKKGWSAYKSIYLDKQNVKLNVTKFKETLSHALEL
                     LHV"
     misc_feature    484..1236
                     /gene="LOC139839820"
                     /note="Glycosyltransferase 61; Region: Glyco_transf_61;
                     cl15705"
                     /db_xref="CDD:472831"
ORIGIN      
        1 atgacatacg atgagatgtt tgctcgaagc ttcagtcgac gtgatcaaat aagattgaag
       61 tatagcgcat tcgctgcatg ctttgtagtc gcatgctgtt tgtgcactgt gttcaagcct
      121 tacctcggcc cactacctgc tttgaatttg aggttgacga tggctgacgg actacaatta
      181 gcgatgatta ccgacaaaac aggcgaacca aaacgaccat attctgaagt acaacaaacc
      241 tcacttacat gtgacatatc aaaacacaga tcagatacat gtgagattaa aggtgacgta
      301 aggattaaag ggacatcctc actcatattt gtagcttctt cacacaataa aaatgcttct
      361 ttcatcataa agccttatgc tcgtaatggc gacaaaagtg caatggatct tgttacaaca
      421 tttaccttaa aatcagttga aaaccaacct gaaatcatgc ccgaatgtaa caaaactcac
      481 aacgtaccag ccgtagtttt ttctatcggt ggctatgcta ataacaactt tcacgccttc
      541 acagatgtca taatccctct gtatgctacg tctcgtaaat tcaatggtga agtgaagttc
      601 ctagtgtcga acaaacttcc tcgatggacg agcaaattca aagtagtatt agacaaatta
      661 tcaaggtatg aaactattga tatcgatagg gaaaatatag tacattgctt tcctagtatg
      721 atagttggtc ttaaaaaaga acacacaaaa gagctacact atgaatcaat gaaagatttt
      781 agaaacttct tgagaaattc ttactcgttg gagcgatcca tggttattaa gttaaacaat
      841 agctcaattc aaaaagctcg actcctaatt atttccagac aaaaaacacg agcttttaca
      901 aatgtggaag atgtggttct cgcagccgaa aacatgggat ttgaggtgat tgttagtgag
      961 atgagcgcga atatgacaca tatttctagg ctcgtgaact cgtgtgatgt gttgatcgga
     1021 gttcacgggg cagggttaac gaatatggtt tttttacccg aaaacggcgt gattatacaa
     1081 gtggtaccat ttggaaagat ggaatggttg gcaagtacat attttggtga accttctaag
     1141 gaaatgggtt tgaagtattt ggagtataag attagtgaag atgaaagcag tttgattcaa
     1201 gaatatccat tgaagcatca agtgtttgtg gatccgtatt cagtgcaaaa gaaaggttgg
     1261 agtgcttata aatcaattta tttggataaa cagaatgtga aacttaatgt aactaagttc
     1321 aaagagacat tgtcacatgc gcttgaacta cttcatgtct ag
//
LOCUS       XM_071829985             710 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein uS19x (LOC139839821), mRNA.
ACCESSION   XM_071829985
VERSION     XM_071829985.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..710
                     /gene="LOC139839821"
                     /note="small ribosomal subunit protein uS19x; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 39 Proteins"
                     /db_xref="GeneID:139839821"
     CDS             50..508
                     /gene="LOC139839821"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS19x"
                     /protein_id="XP_071686086.1"
                     /db_xref="GeneID:139839821"
                     /translation="MADVEVDVAAAGAPKKRTFKKFSFRGVDLDALLDMSTDELVKLF
                     TARARRRFQRGLKRKPMALIKKLRKAKREAPAGEKPELVKTHLRNMIIVPEMIGSVVG
                     VYNGKTFNQIEIKPEMIGTYLAEYSISYKPVKHGRPGIGATHSSRFIPLK"
     misc_feature    77..499
                     /gene="LOC139839821"
                     /note="40S ribosomal protein S15; Provisional; Region:
                     PTZ00096"
                     /db_xref="CDD:185442"
     polyA_site      710
                     /gene="LOC139839821"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaccctaaa aacctagccg cacagaagag cagtttacct aattcaacaa tggcggatgt
       61 tgaggttgac gtggcagctg ccggagcacc gaagaagagg acgtttaaga aattcagttt
      121 ccgaggagtt gatttggatg ctcttctgga tatgtctacc gatgagcttg ttaagctctt
      181 cactgcacgt gcacgtcgaa ggttccagag aggtttgaag aggaagccta tggctttgat
      241 taagaagctt cgcaaagcta aacgtgaggc acctgctggt gagaagccag agcttgtgaa
      301 aactcatttg cgaaacatga tcattgttcc tgaaatgatc ggaagtgttg ttggtgtcta
      361 caacggaaag acttttaacc agattgagat taagcctgaa atgattggta cctatcttgc
      421 tgaatactca atttcgtaca agccagtcaa gcacggtcga cctggtattg gtgctactca
      481 ctcttctcgg ttcatcccat tgaagtgaga ccatttcttg gttgagttta tcttctctaa
      541 gtttgtctgg taggattgca atgaatattt ttgttttctg aatcaagtag actcttttta
      601 tttcagaatg taaggcttta catgttttat ggatattgtt ttcaaatgct tgatactttt
      661 tgaagtacct actttatatt ctactttaag ttctcaagct catttcgatt
//
LOCUS       XM_071829986            2876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CRM-domain containing factor
            CFM3A, chloroplastic/mitochondrial-like (LOC139839822), mRNA.
ACCESSION   XM_071829986
VERSION     XM_071829986.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2876
                     /gene="LOC139839822"
                     /note="CRM-domain containing factor CFM3A,
                     chloroplastic/mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139839822"
     CDS             2..2470
                     /gene="LOC139839822"
                     /codon_start=1
                     /product="CRM-domain containing factor CFM3A,
                     chloroplastic/mitochondrial-like"
                     /protein_id="XP_071686087.1"
                     /db_xref="GeneID:139839822"
                     /translation="MALVPTRLDSFHSSVYKLHFFRYCSYNPFKKHKVIANYDNNSSN
                     LNPAHLKKSKLVLRNKNNEASSITESPTLNSKSTKNNDWLEKWGDTQKQIWPKQPEKS
                     LIYENSYDSDSDGVHTSGSTMDRIVEKLKKFGYADDVKDKIKKREIEKGSVEDIFYVE
                     EGILPNSRGGFSPESPLGIEDVFRGSNGKVKFPWEKPSPEDDEKRNSVKLKSKTCVAE
                     LTLPESELRRLRNLAFRLKNKTRITGAGVTREMVALIKDKWKSAEIVKLKVEGSGALN
                     MRRMHEILEMRTGGLVIWRSGSTVALYRGVGYQDPSLKQRKRELSENSSVSSVDVATR
                     SKDGLQVQELDDENIEINEELNYEKEVDKLLEGLGPRYTDWPGCDPLPVDADLLPGTV
                     HGYQPPFRILPYGIKATLIGREATNLRRLARFLPPHFALGRSRQHQGLAAAIIKLWER
                     SSIAKVALKRGVQLTTSERMAEDIKKLTGGILLSRNKDFLVFYRGKDFLSPDVSEALL
                     EKERLAKSLQDEEEHARLRASTFITPKIEVREDHSGSAGTLGESLDANAKWAIRFDDD
                     YEKKVLQEAETQRQADLIRKLERKLRFADRKIMKAEQALSKVEAFLNPTDRPADPESI
                     TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIIKSTNFEDVKN
                     IALSLESESGGVLVSVDKVSKGFAIIVFRGNDYKRPPALRPKNLLTKRRALARSIELQ
                     RREALLKHISTLQTRINKLQSEIEHVSTTKEKGGEELYDSIDASYSTEDEDSEDEGED
                     MYLDTYNSEHEEDDEFDHNPHLED"
     misc_feature    662..913
                     /gene="LOC139839822"
                     /note="CRS1 / YhbY (CRM) domain; Region: CRS1_YhbY;
                     pfam01985"
                     /db_xref="CDD:460405"
     misc_feature    1229..1483
                     /gene="LOC139839822"
                     /note="Escherichia coli YhbY is associated with pre-50S
                     ribosomal subunits, which implies a function in ribosome
                     assembly; Region: CRS1_YhbY; smart01103"
                     /db_xref="CDD:198171"
     misc_feature    1871..2134
                     /gene="LOC139839822"
                     /note="CRS1 / YhbY (CRM) domain; Region: CRS1_YhbY;
                     pfam01985"
                     /db_xref="CDD:460405"
ORIGIN      
        1 catggctctg gttcccactc gtttagactc atttcacagc tcagtctaca agcttcactt
       61 tttcaggtac tgttcatata acccctttaa gaaacacaaa gttattgcaa attacgataa
      121 taattcctcc aatttaaacc cagcccacct aaaaaaatcc aagcttgttc ttagaaacaa
      181 gaacaatgaa gcgagttcta tcactgaatc cccaaccttg aattcaaaaa gtactaaaaa
      241 taatgattgg ttagagaaat ggggtgatac ccagaagcaa atttggccta aacagcctga
      301 aaaatcatta atttatgaaa atagttatga tagtgatagt gatggtgtac atactagtgg
      361 tagtacaatg gatagaattg tagagaaatt aaagaaattt gggtatgctg atgatgttaa
      421 agataagatt aaaaagaggg aaattgagaa gggttcagtt gaggatatat tttatgttga
      481 agaagggatt ttacctaatt caagaggtgg attttcgccc gaatcacctt taggtattga
      541 agatgtgttc aggggtagta atggaaaagt taaatttcca tgggagaaac catcacctga
      601 agatgatgaa aagaggaatt cagtgaagtt aaaaagtaaa acgtgtgtgg ctgagttaac
      661 acttcccgaa tcagagttga ggagattgag gaatttagct tttcggttaa agaataaaac
      721 gaggatcacg ggtgctggtg ttactcgaga aatggtggcg ttgatcaagg ataagtggaa
      781 atcagctgaa attgtgaagc tgaaagttga aggatctggt gcacttaata tgagacgaat
      841 gcacgagata ttagagatga ggactggggg gttggtaatt tggaggtctg ggagtaccgt
      901 tgctctttat agaggcgtag gataccaaga tccatcttta aaacaacgaa aacgtgaact
      961 atctgaaaat tcatctgttt caagtgttga tgttgcaact agatcgaagg atggtttaca
     1021 agtgcaagaa ttggatgatg agaatattga aataaatgaa gaattaaact atgaaaaaga
     1081 agtggataaa ctgttagagg ggttgggtcc taggtatacg gattggcctg ggtgcgaccc
     1141 gttaccggtg gatgcggatt tactcccggg tacagttcat ggataccaac caccgtttag
     1201 aatacttccg tacgggataa aagctacact tatcggaagg gaagctacta atctaagaag
     1261 gctagcgaga tttctcccgc cccattttgc tttaggtaga agcagacaac atcaaggttt
     1321 ggcggcggca ataattaaat tgtgggaaag gagttcgatc gcgaaagttg cgttaaaacg
     1381 tggggtccag ctaactacta gtgaaaggat ggctgaagat atcaagaaat tgacaggtgg
     1441 catacttctt tctagaaaca aagacttttt agttttttac agaggaaaag attttttatc
     1501 acccgatgtt tcggaagcgt tattagaaaa ggaaaggttg gcgaaatctt tacaagatga
     1561 agaagagcat gctcggttaa gagcgtcaac ttttatcacg ccaaaaattg aagtacgaga
     1621 agaccactcg ggatctgctg gtacgctagg cgagagtctc gatgcgaatg ctaaatgggc
     1681 aataaggttt gatgatgatt acgagaaaaa agtgctacaa gaagcagaaa cacaaagaca
     1741 ggctgacctt ataagaaagc ttgaaaggaa gcttcgtttc gctgatcgaa aaataatgaa
     1801 agcggaacaa gccttatcta aagtggaagc atttttaaat ccaaccgatc gtccggcaga
     1861 tccagaaagc atcactgatg aagaaagatt tatgtttcga aagctcggtt taagaatgaa
     1921 agctttcttg ctcctaggtc gacgtggagt gtttgatggg accgtggaga acatgcatct
     1981 tcattggaaa tatcgcgagt tggtaaaaat cattataaag tctacaaatt ttgaggatgt
     2041 taaaaatata gcattatcac ttgaatctga gagtggtggt gtattagtat cggtcgataa
     2101 agtttcgaaa ggatttgcga ttattgtatt tcggggtaat gattataaac ggcctcctgc
     2161 tttaagacca aagaacttgc taaccaagag aagggccttg gcacgttcta ttgagcttca
     2221 acgacgcgag gctcttctga aacatatttc gactttgcag accagaataa acaagttgca
     2281 atctgaaatc gaacatgttt cgactaccaa agagaaaggt ggtgaggagc tatacgacag
     2341 tatagatgca tcgtattcta cagaagacga ggatagtgag gatgaagggg aagacatgta
     2401 ccttgataca tacaacagtg aacatgaaga agatgatgaa tttgaccata atcctcactt
     2461 ggaagattaa gaaaaatgag tatgttgatc gtcttgtttc tggtcaatta tatgtaagaa
     2521 tgaatcgatg gaggtgaaga agaagaatta gaagaagatg atgcgtgaaa aggctgacat
     2581 ggtctgctta caaccatctg acaagttctc gagcagatta aatcatgcta tagatgatat
     2641 cgttgttact tgtaagcttg taaaaactgc gtcgaaatgc taagtttggt agcaagaaat
     2701 gagttatcta tgcgtgcttc tgagttgtta ccgacttata tagctataca ttaacatggg
     2761 catgtttcag atttcaggca ttcgcaactt gcaaatgtca ttttgtaaga atgttttggt
     2821 gtgaagaatg catctaaaca tgcagaacag tttttaaaac aaagaataag aaaaat
//
LOCUS       XM_071829987             710 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein uS19x (LOC139839823), mRNA.
ACCESSION   XM_071829987
VERSION     XM_071829987.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..710
                     /gene="LOC139839823"
                     /note="small ribosomal subunit protein uS19x; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 39 Proteins"
                     /db_xref="GeneID:139839823"
     CDS             50..508
                     /gene="LOC139839823"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS19x"
                     /protein_id="XP_071686088.1"
                     /db_xref="GeneID:139839823"
                     /translation="MADVEVDVAAAGAPKKRTFKKFSFRGVDLDALLDMSTDELVKLF
                     TARARRRFQRGLKRKPMALIKKLRKAKREAPAGEKPELVKTHLRNMIIVPEMIGSVVG
                     VYNGKTFNQIEIKPEMIGTYLAEYSISYKPVKHGRPGIGATHSSRFIPLK"
     misc_feature    77..499
                     /gene="LOC139839823"
                     /note="40S ribosomal protein S15; Provisional; Region:
                     PTZ00096"
                     /db_xref="CDD:185442"
     polyA_site      710
                     /gene="LOC139839823"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaccctaaa aacctagccg cacagaagag cagtttacct aattcaacaa tggcggatgt
       61 tgaggttgac gtggcagctg ccggagcacc gaagaagagg acgtttaaga aattcagttt
      121 ccgaggagtt gatttggatg ctcttctgga tatgtctacc gatgagcttg ttaagctctt
      181 cactgcacgt gcacgtcgaa ggttccagag aggtttgaag aggaagccta tggctttgat
      241 taagaagctt cgcaaagcta aacgtgaggc acctgctggt gagaagccag agcttgtgaa
      301 aactcatttg cgaaacatga tcattgttcc tgaaatgatc ggaagtgttg ttggtgtcta
      361 caacggaaag acttttaacc agattgagat taagcctgaa atgattggta cctatcttgc
      421 tgaatactca atttcgtaca agccagtcaa gcacggtcga cctggtattg gtgctactca
      481 ctcttctcgg ttcatcccat tgaagtgaga ccatttcttg gttgagttta tcttctctaa
      541 gtttgtctgg taggattgca atgaatattt ttgttttctg aatcaagtag actcttttta
      601 tttcagaatg taaggcttta catgttttat ggatattgtt ttcaaatgct tgatactttt
      661 tgaagtacct actttatatt ctactttaag ttctcaagct catttcgatt
//
LOCUS       XM_071829988            2876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CRM-domain containing factor
            CFM3A, chloroplastic/mitochondrial-like (LOC139839824), mRNA.
ACCESSION   XM_071829988
VERSION     XM_071829988.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2876
                     /gene="LOC139839824"
                     /note="CRM-domain containing factor CFM3A,
                     chloroplastic/mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139839824"
     CDS             2..2470
                     /gene="LOC139839824"
                     /codon_start=1
                     /product="CRM-domain containing factor CFM3A,
                     chloroplastic/mitochondrial-like"
                     /protein_id="XP_071686089.1"
                     /db_xref="GeneID:139839824"
                     /translation="MALVPTRLDSFHSSVYKLHFFRYCSYNPFKKHKVIANYDNNSSN
                     LNPAHLKKSKLVLRNKNNEASSITESPTLNSKSTKNNDWLEKWGDTQKQNWPKQPEKS
                     LIYENSYDSDSDGVHTSGSTMDRIVEKLKKFGYADDVKDKIKKREIEKGSVEDIFYVE
                     EGILPNSRGGFSPESPLGIEDVFRGSNGKVKFPWEKPSPEDDEKRNSVKLKSKTCVAE
                     LTLPESELRRLRNLAFRLKNKTRITGAGVTREMVALIKDKWKSAEIVKLKVEGSGALN
                     MRRMHEILEMRTGGLVIWRSGSTVALYRGVGYQDPSLKQRKRELSENSSVSSVDVATR
                     SKDGLQVQELDDENIEINEELNYEKEVDKLLEGLGPRYTDWPGCDPLPVDADLLPGTV
                     HGYQPPFRILPYGIKATLIGREATNLRRLARFLPPHFALGRSRQHQGLAAAIIKLWER
                     SSIAKVALKRGVQLTTSERMAEDIKKLTGGILLSRNKDFLVFYRGKDFLSPDVSEALL
                     EKERLAKSLQDEEEHARLRASTFITPKIEVREDHSGSAGTLGESLDANAKWAIRFDDD
                     YEKKVLQEAETQRQADLIRKLERKLRFADRKIMKAEQALSKVEAFLNPTDRPADPESI
                     TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIIKSTNFEDVKN
                     IALSLESESGGVLVSVDKVSKGFAIIVFRGNDYKRPPALRPKNLLTKRRALARSIELQ
                     RREALLKHISTLQTRINKLQSEIEHVSTTKEKGGEELYDSIDASYSTEDEDSEDEGED
                     MYLDTYNSEHEEDDEFDHNPHLED"
     misc_feature    662..913
                     /gene="LOC139839824"
                     /note="CRS1 / YhbY (CRM) domain; Region: CRS1_YhbY;
                     pfam01985"
                     /db_xref="CDD:460405"
     misc_feature    1229..1483
                     /gene="LOC139839824"
                     /note="Escherichia coli YhbY is associated with pre-50S
                     ribosomal subunits, which implies a function in ribosome
                     assembly; Region: CRS1_YhbY; smart01103"
                     /db_xref="CDD:198171"
     misc_feature    1871..2134
                     /gene="LOC139839824"
                     /note="CRS1 / YhbY (CRM) domain; Region: CRS1_YhbY;
                     pfam01985"
                     /db_xref="CDD:460405"
ORIGIN      
        1 catggctctg gttcccactc gtttagactc atttcacagc tcagtctaca agcttcactt
       61 tttcaggtac tgttcatata acccctttaa gaaacacaaa gttattgcaa attacgataa
      121 taattcctcc aatttaaacc cagcccacct aaaaaaatcc aagcttgttc ttagaaacaa
      181 gaacaatgaa gcgagttcta tcactgaatc cccaaccttg aattcaaaaa gtactaaaaa
      241 taatgattgg ttagagaaat ggggtgatac ccagaagcaa aattggccta aacagcctga
      301 aaaatcatta atttatgaaa atagttatga tagtgatagt gatggtgtac atactagtgg
      361 tagtacaatg gatagaattg tagagaaatt aaagaaattt gggtatgctg atgatgttaa
      421 agataagatt aaaaagaggg aaattgagaa gggttcagtt gaggatatat tttatgttga
      481 agaagggatt ttacctaatt caagaggtgg attttcgccc gaatcacctt taggtattga
      541 agatgtgttc aggggtagta atggaaaagt taaatttcca tgggagaaac catcacctga
      601 agatgatgaa aagaggaatt cagtgaagtt aaaaagtaaa acgtgtgtgg ctgagttaac
      661 acttcccgaa tcagagttga ggagattgag gaatttagct tttcggttaa agaataaaac
      721 gaggatcacg ggtgctggtg ttactcgaga aatggtggcg ttgatcaagg ataagtggaa
      781 atcagctgaa attgtgaagc tgaaagttga aggatctggt gcacttaata tgagacgaat
      841 gcacgagata ttagagatga ggactggggg gttggtaatt tggaggtctg ggagtaccgt
      901 tgctctttat agaggcgtag gataccaaga tccatcttta aaacaacgaa aacgtgaact
      961 atctgaaaat tcatctgttt caagtgttga tgttgcaact agatcgaagg atggtttaca
     1021 agtgcaagaa ttggatgatg agaatattga aataaatgaa gaattaaact atgaaaaaga
     1081 agtggataaa ctgttagagg ggttgggtcc taggtatacg gattggcctg ggtgcgaccc
     1141 gttaccggtg gatgcggatt tactcccggg tacagttcat ggataccaac caccgtttag
     1201 aatacttccg tacgggataa aagctacact tatcggaagg gaagctacta atctaagaag
     1261 gctagcgaga tttctcccgc cccattttgc tttaggtaga agcagacaac atcaaggttt
     1321 ggcggcggca ataattaaat tgtgggaaag gagttcgatc gcgaaagttg cgttaaaacg
     1381 tggggtccag ctaactacta gtgaaaggat ggctgaagat atcaagaaat tgacaggtgg
     1441 catacttctt tctagaaaca aagacttttt agttttttac agaggaaaag attttttatc
     1501 acccgatgtt tcggaagcgt tattagaaaa ggaaaggttg gcgaaatctt tacaagatga
     1561 agaagagcat gctcggttaa gagcgtcaac ttttatcacg ccaaaaattg aagtacgaga
     1621 agaccactcg ggatctgctg gtacgctagg cgagagtctc gatgcgaatg ctaaatgggc
     1681 aataaggttt gatgatgatt acgagaaaaa agtgctacaa gaagcagaaa cacaaagaca
     1741 ggctgacctt ataagaaagc ttgaaaggaa gcttcgtttc gctgatcgaa aaataatgaa
     1801 agcggaacaa gccttatcta aagtggaagc atttttaaat ccaaccgatc gtccggcaga
     1861 tccagaaagc atcactgatg aagaaagatt tatgtttcga aagctcggtt taagaatgaa
     1921 agctttcttg ctcctaggtc gacgtggagt gtttgatggg accgtggaga acatgcatct
     1981 tcattggaaa tatcgcgagt tggtaaaaat cattataaag tctacaaatt ttgaggatgt
     2041 taaaaatata gcattatcac ttgaatctga gagtggtggt gtattagtat cggtcgataa
     2101 agtttcgaaa ggatttgcga ttattgtatt tcggggtaat gattataaac ggcctcctgc
     2161 tttaagacca aagaacttgc taaccaagag aagggccttg gcacgttcta ttgagcttca
     2221 acgacgcgag gctcttctga aacatatttc gactttgcag accagaataa acaagttgca
     2281 atctgaaatc gaacatgttt cgactaccaa agagaaaggt ggtgaggagc tatacgacag
     2341 tatagatgca tcgtattcta cagaagacga ggatagtgag gatgaagggg aagacatgta
     2401 ccttgataca tacaacagtg aacatgaaga agatgatgaa tttgaccata atcctcactt
     2461 ggaagattaa gaaaaatgag tatgttgatc gtcttgtttc tggtcaatta tatgtaagaa
     2521 tgaatcgatg gaggtgaaga agaagaatta gaagaagatg atgcgtgaaa aggctgacat
     2581 ggtctgctta caaccatctg acaagttctc gagcagatta aatcatgcta tagatgatat
     2641 cgttgttact tgtaagcttg taaaaactgc gtcgaaatgc taagtttggt agcaagaaat
     2701 gagttatcta tgcgtgcttc tgagttgtta ccgacttata tagctataca ttaacatggg
     2761 catgtttcag atttcaggca ttcgcaactt gcaaatgtca ttttgtaaga atgttttggt
     2821 gtgaagaatg catctaaaca tgcagaacag tttttaaaac aaagaataag aaaaat
//
LOCUS       XM_071829989            5812 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein REDUCED CHLOROPLAST
            COVERAGE 2-like (LOC139839825), mRNA.
ACCESSION   XM_071829989
VERSION     XM_071829989.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5812
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5812
                     /gene="LOC139839825"
                     /note="protein REDUCED CHLOROPLAST COVERAGE 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 24 Proteins"
                     /db_xref="GeneID:139839825"
     CDS             252..5411
                     /gene="LOC139839825"
                     /codon_start=1
                     /product="protein REDUCED CHLOROPLAST COVERAGE 2-like"
                     /protein_id="XP_071686090.1"
                     /db_xref="GeneID:139839825"
                     /translation="MAPKSTKGKPHKAKGDKKKKEEKVLPTVLEIEVETPEESQVTLK
                     GISTDKILDVRKLLAVNVEMCHLTNYSLSHEVRGPGLKDTVEVASLKPCHLTVIEEDY
                     TEDHAVAHVRRLLDIVACTTAFGSASTTPKSTVIRASSNAPGLNDGTKSPKTEGSISS
                     DQSEKGDPTAEIYPPPKLGQFYDFFSFSHLTPPIQYIRRSARPFLDKADDDFFKIDVR
                     VCSGKPMTIVVCRKGFYPAGKRILLSHSLVGLLKQISRIFDGAYKSLMKAFIEHNKFG
                     NLPYGFRANTWVVPPIVANNPSIFPPLPVEDENWDGNGGGQGRTGKHDHRQWAKEFSI
                     LAAMPCKTQEERQVRDRKAFLLHCLFVDISVLKAVSAIKSLAETSNGSLIGSIEEKVG
                     DLVISITKDVADASTKIDGKNDGSRVLGLSQEELAKRNLLKGITADESVTIHDTSTLG
                     IVIVRHCGYTAVVKVETEVNWGGKPIPQDIDIEDQPEGGANSLNVNSLRMLLYQSSTP
                     SPSGAVELVQGADVEDLQSAKVLVKKILEESVQKLQEEDSKKTKSIRWELGACWVQHL
                     RNQASGKSDSKISSESKVEPEVKGLGKGLLKEIKKKSDDKSSNIEQEVAKSDDSVNKE
                     AAKFNEEKEIMWKNVVPEAAYIRLKESDTGLHLKSPDELIEMAHKYYDDVALPKLVAD
                     FGSLELSPVDGRTLTDFMHTRGLRMCSLGRVVELADKLPHVQSLCIHEMVVRAYKHIL
                     QAVIAAVDNIADLAGSIASCLNLLLGTHFGNDDEDLKWKWVECFLSKRYAWKWKNECR
                     TDLRKFSILRGLCHKVGLELVARDYDMDSTSPFKKADIISTVPIYKHVACSSADGRTL
                     LESSKSSLDKGKLEDAVNHGTKALLKLVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQA
                     TIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCG
                     PSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGTDHIQTAASYHAIAIA
                     LSLMEAYSLSVQHEQTTLQILQAKLGPEDLRTQDAAAWLEYFESKALEQQEAARNGTP
                     KPDASISSKGHLSVSDLLDYIAPDADMKAPEAQKKQARAKQLKVKYEQTEESLVNELK
                     RDEVLSAKEPVPDESSDKAITFEPPIKFASEIDSVDTKPDLIQPEAIEKEQMSEIVEL
                     ESSDEGWQEALSKAARKSLSSRRPNLAKINTINLPNVSQSSKYRSKSAKFTFPRTNTT
                     ESATSTGPPPSVTKKYVKSQSFGPKPTNLSNTLPTSDSSPNPKSSSPASNDQVVKRSP
                     VLSSISAKEAGKLFSYKEVALAAPGSIVKAVAERFPKDASPATTDETKKEVKNEDKNE
                     DIQNLDKVVQPLEEEPENTIDEKKEEQPEPEKPQPQKPDSENPDNEKAEPEIVSESSS
                     VTENPDPSKNDKKDDPKEVEISEPGEDYPNESAAEKDEKEITKKLSAAAPPFNPSNVP
                     VFGSIPIPLNEHGGGILPPPVSIPTMITINPARRSPHQSATARVPYGPRLAGGYNRTA
                     NRVPRSKPTFDHVVVDASHLNNPPPVIMNPHAAEFVPGQPWGVHNGYLVSPEGYHPLS
                     PNGFPLAINNSQSGQTAYPLSPVDSVVSPVDSVGSPSVTTQQVPAADVENEEKNESTV
                     CQIESEVEEKAIENVNESSSDTDNTKSKNADDEKPIKQWGDYSDGEAEIVS"
     misc_feature    393..605
                     /gene="LOC139839825"
                     /note="Mitochondrial function, CLU-N-term; Region: CLU_N;
                     pfam15044"
                     /db_xref="CDD:464466"
     misc_feature    2319..2726
                     /gene="LOC139839825"
                     /note="An uncharacterized central domain of CLU
                     mitochondrial proteins; Region: CLU-central; cd15466"
                     /db_xref="CDD:271318"
     misc_feature    2841..3503
                     /gene="LOC139839825"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; Region: TPR; COG0457"
                     /db_xref="CDD:440225"
     misc_feature    2940..3020
                     /gene="LOC139839825"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(2946..2951,2958..2963,2967..2969,3063..3065,
                     3072..3077,3084..3089,3093..3098,3189..3191,3198..3203,
                     3210..3215,3222..3224)
                     /gene="LOC139839825"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    3057..3149
                     /gene="LOC139839825"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    3186..3272
                     /gene="LOC139839825"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    3312..3398
                     /gene="LOC139839825"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    <4341..5240
                     /gene="LOC139839825"
                     /note="104 kDa microneme/rhoptry antigen; Provisional;
                     Region: PTZ00449"
                     /db_xref="CDD:185628"
     polyA_site      5812
                     /gene="LOC139839825"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcatattat tatcaccaaa taccacacac tcaaactcat acttatgtaa ttcaatctca
       61 ttcctcacaa atttctctta ttttcatgtg aatccataga ttttggtttc tcaaaagaaa
      121 gtgaaaatat tagtttgttg aattaattta agcaaattga attgattagt tagcattgta
      181 attgttcctt taaacttgaa ctggtagttg attaaaaaaa aaaaaaaaaa aaacttgaac
      241 cggtggttaa catggctcca aaatctacta aaggaaaacc tcataaagct aaaggcgata
      301 agaagaagaa ggaagaaaaa gtattaccaa ccgttttaga aattgaggta gaaacaccag
      361 aagaatcaca agtgacgcta aagggaatat caacggacaa gatcttagat gttcgaaagc
      421 ttttagcagt gaatgtggag atgtgtcact tgaccaatta ctctttgtca catgaggtgc
      481 gtggcccagg cctaaaagat accgttgagg tcgcctcttt aaaaccgtgt cacttaacgg
      541 tcatcgaaga ggattacact gaagatcacg ccgtcgctca cgtccgacga ctgctggaca
      601 tcgtcgcctg caccaccgca ttcggcagcg cgtctaccac gcccaagagt accgtcattc
      661 gagcgtcatc taacgcgccg ggtttgaacg atggaactaa atcaccgaaa acggaaggtt
      721 cgattagttc cgatcagtca gagaagggtg atccgacggc ggagatttac ccgccgccta
      781 agcttgggca gttttacgat ttcttctcgt tttctcacct cacccctccc atacaataca
      841 tcaggaggtc tgctcgtccg tttcttgata aagcagatga cgattttttc aaaatagatg
      901 tacgtgtttg tagtgggaag ccgatgacaa ttgtcgtttg cagaaaaggg ttctatcctg
      961 ccggaaaacg tattcttcta agccactctt tagttggatt attgaagcaa ataagtcgaa
     1021 tctttgatgg tgcgtacaaa tcactcatga aagcattcat tgagcacaat aaatttggga
     1081 atcttcctta tggttttaga gcaaacactt gggttgtacc tcctattgtt gccaacaatc
     1141 cgtcgatttt tccaccactt cctgtagaag acgaaaattg ggacggaaac ggtggtggtc
     1201 aagggcgaac cggtaaacat gatcatcggc aatgggcaaa agagttttcg atcttagcag
     1261 caatgccttg taaaacgcaa gaagaaaggc aagttagaga taggaaagct tttctacttc
     1321 attgtttatt cgtcgacata tcagttttaa aagcagtgtc tgccattaaa agtcttgctg
     1381 aaactagcaa cggttcttta attggttcta tcgaagaaaa agttggagac ttggttatca
     1441 gtataacaaa agatgtggct gatgcaagca caaaaattga cggtaaaaac gatgggagtc
     1501 gtgttcttgg attgtcacag gaggagcttg ctaaacgtaa cctgcttaaa ggcataacag
     1561 cagatgagag tgtgacgatt cacgatactt ctactctagg catagtgatt gttagacatt
     1621 gtggttatac ggctgttgtg aaagttgaaa ccgaggttaa ctggggtgga aaaccgattc
     1681 cccaagacat cgatattgaa gaccaacctg aaggaggtgc taattctttg aatgtcaata
     1741 gtttgaggat gctgttatac cagtcatcaa caccatcacc atctggtgca gtggaactgg
     1801 tgcagggtgc agatgtagaa gatttgcagt ctgctaaggt tttggtgaag aaaatattgg
     1861 aagaaagtgt gcagaaattg caggaggaag actctaaaaa aacaaaatct atcagatggg
     1921 aacttggtgc atgttgggtg caacatctac gaaaccaagc ttctgggaaa tctgattcca
     1981 aaatttcttc agaatctaag gtggaaccag aggtgaaggg tctcggtaag ggtttgttaa
     2041 aggaaatcaa gaaaaaatcc gatgataaaa gcagcaacat tgaacaagaa gttgccaaat
     2101 cagatgatag tgttaacaaa gaggctgcaa agtttaatga agaaaaagaa atcatgtgga
     2161 aaaatgtggt tcccgaagca gcgtatatac gtcttaaaga atcagatacc ggtctccacc
     2221 ttaagtcacc cgatgagttg attgaaatgg cacataagta ctatgatgat gttgctctcc
     2281 ctaagttggt ggctgatttt ggctcccttg aactttcacc tgttgatgga agaactttga
     2341 ctgattttat gcacacaagg ggattgcgaa tgtgctcctt gggccgagtg gttgaacttg
     2401 cagacaagct ccctcatgtt caatcactct gtattcacga gatggttgtt cgagcgtata
     2461 agcatatctt gcaagcagtt atagcagctg ttgacaatat tgctgattta gctgggtcaa
     2521 tagcatcatg cttaaatcta ttactaggaa cacattttgg caacgatgat gaagacttaa
     2581 aatggaagtg ggttgaatgc tttctgtcca agagatatgc atggaaatgg aaaaatgaat
     2641 gtcgtaccga tcttcgtaag ttttccattc ttcgagggct ttgccacaag gttggtcttg
     2701 agcttgttgc aagggattat gatatggact ccacatctcc tttcaagaag gcagatatta
     2761 ttagcacagt tcctatatat aagcatgttg catgctcctc tgcagacggg cgtacacttc
     2821 tagagtcgtc taaatcatca ttggataaag gaaaactgga ggatgctgtc aaccatggaa
     2881 ctaaggcact tttaaaactt gtatctgtct gtggtcctta tcatcgaatg acagcaggag
     2941 cgtatagtct tttggctgtg gtgctctatc acactgggga ttttaatcag gctaccattt
     3001 atcaacaaaa agctttggat atcaacgaga gggagcttgg actcgatcat ccagatacga
     3061 tgaaaagtta cggagacctg gctgtcttct actatcgtct ccaacacacc gagctagctc
     3121 taaagtatgt gaatcgtgcg ctgtatcttt tgcatttaac atgcgggcca tctcatccaa
     3181 acaccgcagc tacgtacata aatgtcgcaa tgatggaaga aggtttagga aatgtccatg
     3241 ttgcccttcg atatcttcat gaagctctca aatgtaatca aaggctactt ggaaccgacc
     3301 acatacaaac tgctgccagc tatcatgcta tagcgatcgc tctttctttg atggaagcat
     3361 actcattgag tgttcagcat gagcagacca ctttgcagat acttcaggct aaacttggac
     3421 ctgaagatct tcgtacccag gacgcagctg catggcttga atatttcgag tccaaggctt
     3481 tggaacaaca agaagctgca cgcaatggta ctccaaagcc agatgcatct atttctagca
     3541 aaggccatct gagtgtatca gatttgttgg attatatagc accagatgca gatatgaaag
     3601 caccagaggc tcaaaagaaa caagctcgtg cgaagcagct taaagtaaaa tatgaacaaa
     3661 ctgaagaatc tttggtcaat gaacttaaac gtgacgaagt tttatcagca aaagagcctg
     3721 ttcccgatga atctagtgat aaagcgatca catttgaacc accaatcaaa tttgcaagcg
     3781 aaatagattc agtggatacg aagccagatt taattcaacc tgaagcaatc gaaaaggaac
     3841 aaatgagtga aattgtagaa ctagaaagct cagatgaagg atggcaagaa gctttgtcta
     3901 aagcagcccg taaatcttta agttctagga gaccaaatct tgcaaaaata aatactataa
     3961 atctcccaaa tgtttcccag tcatcaaaat accgatcgaa gtctgctaaa ttcacattcc
     4021 caagaacaaa cactactgaa agcgccactt ccacgggccc accaccgagc gtcaccaaaa
     4081 agtatgttaa aagtcaaagt ttcggtccaa aaccaacaaa tctttccaac acacttccaa
     4141 cttcagactc aagtccgaat ccaaaatcat caagtccggc atcaaatgat caagttgtga
     4201 aacgttctcc tgttttaagt tcgataagtg ccaaagaagc tggaaaactt ttttcgtaca
     4261 aggaagttgc tttagctgca cctggtagca ttgtgaaggc cgtcgctgaa cgatttccta
     4321 aagacgcttc tccagcaacc acagacgaaa caaaaaaaga agtcaaaaat gaagacaaga
     4381 acgaagacat tcaaaatctt gataaagtgg ttcaaccttt agaagaggaa ccagaaaaca
     4441 ccattgatga aaagaaggaa gagcaacccg agcccgaaaa accccaaccc caaaagcccg
     4501 actctgaaaa tcccgataat gaaaaagctg aacccgagat agtgtctgaa tcatcatcag
     4561 tcactgaaaa tccggatcct tcaaagaatg ataaaaaaga tgacccgaaa gaagttgaga
     4621 tatctgagcc gggtgaagat tacccaaatg aatcggctgc agaaaaggac gaaaaagaga
     4681 taaccaagaa gctatctgcg gctgcacctc cgtttaatcc gtctaacgtt ccagttttcg
     4741 ggtcgattcc aataccttta aatgagcatg gaggaggaat attaccgcca cctgtaagca
     4801 taccgactat gatcacgatt aatccagctc gtcgttcacc tcaccagtca gcaacagcta
     4861 gggttccata tggtccacgc cttgctggcg gctataaccg aaccgcaaac agggtgccac
     4921 gtagtaagcc tacgtttgac catgtggtgg ttgatgcaag tcatcttaac aacccccctc
     4981 cagtaattat gaacccacat gcagctgagt ttgtacctgg tcaaccatgg ggggttcata
     5041 acggttacct agtttcacct gaaggttatc atcctctttc cccaaatggt ttcccactcg
     5101 ctataaacaa ttctcaatca ggtcaaaccg catacccctt gtccccagtt gactcggttg
     5161 tatccccggt tgactcggtc ggatctccat cagtaactac tcaacaagta cctgctgctg
     5221 atgtggagaa tgaagaaaag aatgaatcaa ctgtttgtca aattgaatct gaagttgaag
     5281 aaaaggcgat tgagaatgtt aatgagtcat cttccgacac cgataatact aaaagcaaaa
     5341 atgcagatga tgagaaacca attaaacaat ggggggatta cagtgatggt gaagctgaga
     5401 ttgtaagtta aaaggttaat gttgtaaaat catttttggt gagtgaaatg gtttatatat
     5461 tgctctcaga ggcttttggt ttgaagaaaa ctaatgctac gtttcatcat atgctcgagt
     5521 ttgaggatgt gaaaactaag tatacgccta cagctcgctg cccacagctc gagttggata
     5581 actgttttga tgaatcaagt gaaattcgtt gacaaaaaac tggaaagtgt catgcaacct
     5641 tatttttttc aggcaatttt ttttatgttt tcttacgaaa tactccgtat tggttttggc
     5701 cggtatatgg tttctctatc attatgcagt caatttgttt gtatttgtat ctagttacaa
     5761 taacaatcaa attcttttac aaagcctgca aacatttgta atatttttaa ta
//
LOCUS       XM_071829990            1846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839826), mRNA.
ACCESSION   XM_071829990
VERSION     XM_071829990.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1846
                     /gene="LOC139839826"
                     /note="uncharacterized LOC139839826; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839826"
     CDS             220..1698
                     /gene="LOC139839826"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686091.1"
                     /db_xref="GeneID:139839826"
                     /translation="MIEDDDLDLRGNLSNTFSALTVSGRHQVSSDLFDNEDVNQQISE
                     QDEEIMQLRRHLAEYEVKQARIQNEKQVLENRIASIYRAFDQQQQDLLDATSKAMAYR
                     QDIMEENIRVGYALRVAQEERSIFISSLVPLLSDASLPPVDLDAYSIVSNLRILFKHN
                     KERLAIAQERLRDSQYQPIILHSQREDLPLNTDWHQSSFAPLQETQYTGAERQTNDDD
                     DDDDDDLVNPHYLPAILEESSSKVDDDDDSEDQSRRGDYDHEDTINLLPTVEGLQILG
                     EAFPGHEIQASGYSRNGTTHCGFEWVRHLQDGSVNYIEGANQTKYTVTADDVDHYLAV
                     EVQPLDDRERKGELVTCFANDNKKITCHPDMLREIEKSLSVGHVSFKLYVWEGSLSTW
                     EHATLELKKSGYSIKLNGPNNTVVVDDKYTPATLISLPGDVPLEFSILGSGANEQYLR
                     ADDSSTYISSSRDTIVLTMRLFVKRAVDKKLGKKKRRVLFFK"
     misc_feature    <325..>588
                     /gene="LOC139839826"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 tcatcaatgc atgaccttct taaagtcctg caataatctc tctcaatcaa tacacacaca
       61 tatacatata gctatcgtat ctatctctct gcaaattctg tggtgtagac ttattcagac
      121 aacaaacaga atccatcgtg tgttttcagc ttatatattg atcgagatta taagcaaaga
      181 tggttttatt ctaggggttg ttgatgcgtg tggaataaaa tgatagaaga tgatgacctt
      241 gacctcagag gcaatttatc aaacactttc tctgcattga ccgtgagtgg aaggcatcaa
      301 gttagcagcg atttgttcga taacgaagat gttaatcaac aaatttcaga acaagatgaa
      361 gaaattatgc aattgaggag acatttagct gagtatgagg tcaagcaagc acgaatacag
      421 aatgagaaac aagttcttga aaatcgcatt gcatcgatat acagggcttt tgatcagcaa
      481 caacaagacc ttttagatgc tacctcgaaa gcgatggctt acagacaaga tataatggaa
      541 gaaaatatac gagttggata tgcgttacga gtagctcaag aagaaaggtc gatattcata
      601 tcgtcgttag tacctttgct ttcggatgca tctctacctc ctgtagatct tgatgcatat
      661 tcaattgtta gtaatttaag gattttgttt aagcataaca aagaaagact cgcgatcgcc
      721 caagaacggc taagggattc tcaataccag cctataattt tgcattctca aagggaagat
      781 ctgcctttaa acacagattg gcaccaatca agcttcgcgc ctttacaaga aacacagtat
      841 actggtgcgg agagacaaac gaatgatgat gatgatgatg atgatgatga tctagttaat
      901 cctcattatc taccagcaat tcttgaagag tcttcttcaa aagttgatga tgatgatgat
      961 tcagaagatc aaagtagaag aggtgattat gatcatgaag atacaattaa tctccttccc
     1021 acagtcgagg gtttgcagat tttaggtgaa gcttttcctg gtcatgaaat tcaagcaagt
     1081 ggttactcaa gaaacggaac cactcattgt gggtttgagt gggtccgtca tttgcaagac
     1141 gggtcagtca attatataga aggtgcaaac caaacgaaat acacagttac agcagatgat
     1201 gtagatcatt atcttgctgt agaagttcaa ccacttgatg acagagagcg aaaaggtgaa
     1261 cttgtaacat gctttgcaaa cgacaacaag aaaatcactt gtcatcctga tatgcttcga
     1321 gaaattgaga agtcattaag tgtgggccat gtgagtttca agttgtatgt ctgggaaggg
     1381 tctctcagca cttgggaaca tgcaactttg gagttaaaga agagtggtta cagcattaag
     1441 cttaatggac ccaataatac tgtcgtagtc gatgataagt atacaccagc cacacttata
     1501 agtttaccgg gggatgtacc tttagaattc tcaatacttg gttctggggc caatgagcaa
     1561 tatttacgcg ctgatgatag ttcaacttat atcagcagct caagagatac aattgttttg
     1621 acgatgagat tattcgtcaa acgcgctgtt gataagaagc ttggaaagaa gaaaagaagg
     1681 gttctgtttt tcaagtaagt aatctgttgt attatatagg ttcttgtagc tatatattgt
     1741 ataattcttt tggccattga gtgtgaaagg taggtagttt cagttttgcc ttatataata
     1801 taataataat aattacatta aaatcttttg taaatgagat atgtat
//
LOCUS       XM_071829991            1991 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides leucine aminopeptidase
            1-like (LOC139839827), mRNA.
ACCESSION   XM_071829991
VERSION     XM_071829991.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1991
                     /gene="LOC139839827"
                     /note="leucine aminopeptidase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139839827"
     CDS             39..1784
                     /gene="LOC139839827"
                     /codon_start=1
                     /product="leucine aminopeptidase 1-like"
                     /protein_id="XP_071686092.1"
                     /db_xref="GeneID:139839827"
                     /translation="MAAAIRVAFTAHSSSSLTLFSLTPFFNNNFRSISIRRRRANPFL
                     LSCSSRSMAHVIAKATLGLTHPAQIDHPKISFSAKETDLVEWKGDTLAVGVTEKDMAK
                     DDNSKFQNPLLKKLDSQLGGLLSEVSVEEDFTGKTGQSTVIRIAGVGSKRVSLIGLGK
                     GPNGSSTVAYRSLGESVASAAKSSQASNVAIALASSEGLTPESKLTTASAIAKGTLLG
                     TYEDSRFKSESKKSALKSVDLFGFGAGPDLEKKLKYTEDVCTGVILAKELVNAPANVL
                     TPEVLANEAELIAKTYSDVFTAKILDTEQCKELKMGSYLGVAAASTNPPKFIHLCYKP
                     PSGPVKTKLALVGKGLTFDSGGYNIKTGPGCSIEMMKVDMGGSAAVLGAAKALGQIKP
                     AGVEVHFIVAACENMISGTGMRPGDILTASNGKTIEVNNTDAEGRLTLADALVYACNQ
                     GVDKIVDLATLTGACIVALGPSVAGIFTPSDELSKEVVAASEVAGEKLWRLPMEESYW
                     EQMKSGVADMVNTGGRQGGSITAALFLKQFVDEKVQWLHIDMAGPVWNDKKKAATGFA
                     ISTLVEWVVSNSSSS"
     misc_feature    264..1760
                     /gene="LOC139839827"
                     /note="multifunctional aminopeptidase A; Provisional;
                     Region: PRK00913"
                     /db_xref="CDD:234863"
     polyA_site      1991
                     /gene="LOC139839827"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccccacgcct tttatcttct tgttccatat tattataaat ggcagcggcc attagagttg
       61 catttacagc ccactcatct tcttcactca ctctattttc tttaacccca tttttcaata
      121 ataatttcag atcaatttca atcagaagaa gaagagcaaa ccctttttta ttatcttgtt
      181 cttcaagaag tatggctcat gtaattgcta aggccactct tggcctcact catcctgctc
      241 agattgatca cccaaagatc tcattttctg ctaaagaaac cgatttggta gaatggaaag
      301 gagatacact cgcagtcggt gtaaccgaga aagacatggc aaaagatgat aactccaaat
      361 tccaaaaccc gctcttgaaa aagctagatt cacaattagg cggattgttg tctgaagtat
      421 ccgttgagga agatttcact ggaaagactg gacagtctac tgttattagg attgctggtg
      481 ttgggtccaa acgggtcagc ctgattggtc ttggaaaggg tcccaatggg tcatctactg
      541 tagcttaccg cagtcttggt gagtctgttg cgtcggctgc aaaatcttca caagcaagca
      601 atgtagccat tgcacttgct tcttcggaag gcttaactcc tgaatcaaag ctcactactg
      661 cctcggcaat agcaaaaggc acgttgctgg gtacatacga ggatagcaga ttcaaatccg
      721 agtcaaagaa gtcagctcta aagtctgttg atctttttgg ttttggagct ggacccgacc
      781 tagaaaagaa gcttaagtac acagaagacg tttgcacagg ggtgattttg gcaaaagagc
      841 ttgtaaatgc acctgctaat gtgctcactc ctgaggtact agcaaacgag gctgagttga
      901 ttgcgaagac atacagtgac gtttttaccg caaagatttt ggatacagag caatgcaaag
      961 aactgaaaat gggatcgtat cttggtgttg ctgcagcttc aactaatcct cctaaattta
     1021 ttcatctgtg ttataaacca ccaagtgggc ccgtcaaaac caagctggcc ttagtgggaa
     1081 aggggttgac ttttgacagt ggtggttaca acattaaaac aggacctggt tgctcgatag
     1141 agatgatgaa agttgatatg ggaggctcag cagcggtttt aggtgctgca aaagcccttg
     1201 gtcaaattaa accggctggt gttgaggttc actttattgt ggcagcttgt gagaacatga
     1261 taagtggaac tggtatgagg cccggtgaca tattaacagc ctcaaacggg aagacaattg
     1321 aggttaataa cactgatgca gaaggtagac ttacactcgc tgatgctttg gtgtatgcct
     1381 gtaatcaagg tgtagacaag attgttgatt tggcaacttt gactggagcc tgcatagttg
     1441 ctcttggtcc ctccgttgca ggtatattta cacctagcga tgaattgtct aaggaggtag
     1501 ttgctgcgtc agaagtagca ggagaaaaac tatggaggtt accaatggag gaaagttatt
     1561 gggagcaaat gaaatccgga gttgcggata tggttaacac cggtggtcgt cagggtggtt
     1621 ctattactgc tgctcttttc ttgaagcagt ttgttgatga gaaagttcaa tggttgcata
     1681 tcgatatggc tggacctgtt tggaatgaca agaaaaaggc ggcaactgga tttgctattt
     1741 cgactttggt ggaatgggtt gtatccaact cttcttcatc ctaaaccctt tgatcttctt
     1801 gtagtatgcc attgcagtgc acgtgtgccg atagctaata caggctaaag gagcttgata
     1861 cgtgggtaac gttgatcttt aagtttttat gaaataaaaa gatttaatct atgatataaa
     1921 cctaactctt ttgtattttg atccatctgt tgtgacaaga aatttacaat ttgcaagtgg
     1981 cttctttttt t
//
LOCUS       XM_071829992            2920 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable LRR receptor-like
            serine/threonine-protein kinase At2g24230 (LOC139839828), mRNA.
ACCESSION   XM_071829992
VERSION     XM_071829992.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2920
                     /gene="LOC139839828"
                     /note="probable LRR receptor-like serine/threonine-protein
                     kinase At2g24230; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 15 Proteins"
                     /db_xref="GeneID:139839828"
     CDS             165..2738
                     /gene="LOC139839828"
                     /codon_start=1
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At2g24230"
                     /protein_id="XP_071686093.1"
                     /db_xref="GeneID:139839828"
                     /translation="MGFALFGSFLILTLFLKSNLGQQQEQFIPNSDKFLISTFFEKMG
                     INSSKDTHIYNLSSSVCSWQVIFCDANQQNVIGLVAPNLGLTGPIPDNTIGKLKKLQF
                     LDLNSNQITDFSSDFWSLISLKSLNLSNNMFSINLSTNIGNFASLEKLDLSFNNFSGD
                     LPDSFSSLTSLQLLNLNRNLFNSVIPSGFTNCHSLISFDLSMNSFHGSLPESFHSAFP
                     KLKSLNLAGNLIKGRGSDFSKMVSLTYLNISKNLFTGSVVEIFQGPLEVVDLSSNHFE
                     GHISQVNFSPSFNWSQLIHLDLSDNQISGMFFSNLSQAHNLKHLNLAKNRFSKQSFIH
                     IDGLHCLEYLNLSKTNIIGPINDNISTLTHLKTLDLSSNHLAGRIPLLTLKTLQNLDL
                     SNNNLTGYIPLTLIKKLPWMERFNFSYNNLTLCNSELPLETLEYAFIGSTNSCPFAAN
                     PTFFKRKEHKHRGLKLALGLAITLVSLLVGLLLFAYGCRKRTRMWDVKESCVEEKVIS
                     GPFSFKTDSTTWVADVKVGSLVPVVIFEKPLLNFTFADLLSATSNFDQDTVLDEGKFG
                     PVYHGFLAGRGHVAIKVLTHGSTMTDQEAESELEYLGRIKHPNLVPLTGYCLAGEQRI
                     VIYDYMENGNLHNLLYDLPLGVHVNEDWSTDTWEDQENDKNGIQNVGSEAVLVTWRFR
                     HKIAVGTARALAFLHHGCSPPIIHRDVKASSVYIDYNLEPRLSDFGLAKIFGNGLNDD
                     MARGSPGYASPDDMITPKYDVYGFGVILLELITGKKPVGDEYPDDGNLKAQDLVGWVR
                     GLVRTNRCSQAIDPKIRATGDELQLMEGLKIGYLCTADLPLKRPTMQQVVGLLKDIEP
                     V"
     misc_feature    417..2720
                     /gene="LOC139839828"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    462..530
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    531..602
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    603..746
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    747..821
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    822..890
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    891..956
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    957..1040
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1041..1112
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1113..1184
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1185..1256
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1257..1322
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1323..1397
                     /gene="LOC139839828"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1842..2726
                     /gene="LOC139839828"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1842..1853,1860..1862,1866..1868,1902..1904,
                     1908..1910,1995..1997,2043..2054,2286..2288,2298..2303,
                     2307..2309,2337..2342)
                     /gene="LOC139839828"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 agagtagcag attttagtgg tggtggtagt ggttgggtgg tgggttttgg agttaatatc
       61 attagcatta ataactgagt tgggaaattg tattcaaggg tgataaaaat atttgcgttt
      121 tgttggggtt ttcaatcttt atcttcttta gttaatctga agaaatgggg tttgctttat
      181 ttggttcttt tttgattcta acacttttct tgaagtcaaa ccttggtcaa cagcaagaac
      241 agttcatacc caattcagat aagttcctca tctctacttt ctttgagaaa atgggtataa
      301 attcttcaaa agacactcat atttacaatc tttcttcatc tgtttgttca tggcaagtta
      361 tcttttgtga tgctaaccaa caaaatgtca ttggtcttgt tgctcccaat ttaggcctca
      421 ctggcccaat cccagacaac acaataggca aacttaagaa gcttcaattt cttgatttga
      481 atagtaatca aatcactgat ttttcatctg atttttggag cttaatttca ctcaaaagcc
      541 ttaatctttc aaacaacatg ttctcaatca atctttcaac caacattggc aactttgcat
      601 cacttgaaaa acttgatctt tctttcaaca atttctcagg ggatcttcct gattcattca
      661 gttctcttac aagtttacaa cttcttaatc tcaatcgaaa tctgttcaat tcagttattc
      721 catcagggtt tacaaattgc cactctttga tttcttttga cctttctatg aacagttttc
      781 atggaagttt acctgaaagt tttcattctg catttcctaa gttaaaaagc ttgaatcttg
      841 ctggcaattt gataaaagga aggggttctg atttttcaaa aatggtttct ttaacttact
      901 tgaacatttc caaaaatctt ttcacaggtt ctgttgttga aatctttcaa gggccattag
      961 aagttgttga tttgagtagt aatcattttg aaggtcatat ttctcaggta aatttcagtc
     1021 catcttttaa ttggtctcaa ttgattcatc ttgatttatc tgataatcag attagtggaa
     1081 tgtttttcag taatttaagc caagcccata atcttaaaca ccttaatctt gccaaaaaca
     1141 ggttctccaa acaaagtttc atccacattg atgggctcca ttgtctagag tatcttaact
     1201 tatctaaaac caatataatc ggtccaatta atgacaacat ttcaacttta actcatttga
     1261 aaacgcttga tctttcatcc aatcatcttg ctggtagaat tccactgttg acccttaaaa
     1321 cactccaaaa tcttgatctt tcaaacaata acttaactgg atacataccc ttaactctta
     1381 ttaagaagct tccatggatg gaaagattca acttttcata caacaactta accctttgta
     1441 attctgaatt accactcgaa acacttgaat acgcattcat tggttcaaca aatagttgcc
     1501 catttgctgc aaatccaact tttttcaaga gaaaagaaca taaacataga ggactcaagc
     1561 ttgctttggg tctagctatc actttagtat ccttgcttgt tggtttgcta ctttttgcat
     1621 atggttgtcg caaaagaacc cgaatgtggg atgttaaaga gtcttgtgtt gaagaaaaag
     1681 tcatttcagg cccgttttca tttaaaacgg attcaaccac ttgggtagca gatgtcaagg
     1741 ttggatcttt agtcccagta gtgatctttg aaaagccatt gttaaatttc accttcgcgg
     1801 atcttttatc agctacatca aactttgatc aagataccgt tttggatgaa gggaagtttg
     1861 ggcccgttta tcatgggttc ttggcaggtc ggggtcatgt cgcaattaag gttctgaccc
     1921 atggttccac tatgacagac caagaggctg aaagtgaact cgagtatttg ggccgtatca
     1981 aacacccgaa tcttgtccct ttgacggggt attgcttagc aggtgaacaa aggatcgtaa
     2041 tatatgatta tatggaaaat ggaaatttgc ataatttatt gtatgatctt ccgctcggag
     2101 ttcatgtgaa tgaagactgg agtactgata catgggagga tcaagaaaat gacaaaaacg
     2161 gtattcaaaa cgtgggttcc gaggcggttt tggtgacgtg gcggtttagg cacaagatcg
     2221 ctgtaggcac tgctcgtgcg ttagcgtttc tccaccatgg atgctcaccg cctatcattc
     2281 atagagacgt gaaagctagt agcgtttata ttgattacaa tcttgaaccg aggttatccg
     2341 actttgggct ggcgaaaatc tttggaaatg gtcttaatga tgacatggct cgtgggtccc
     2401 ctggatacgc gtctcccgat gatatgatca ctccaaaata tgatgtttat ggattcgggg
     2461 tgattcttct tgaactgata acaggcaaaa agccagttgg agacgagtat ccggatgatg
     2521 gtaatttgaa agcccaagat ttggtaggtt gggttagagg gcttgtaagg acgaaccgtt
     2581 gttcacaagc tatagaccct aagattcgag ccacgggtga tgaacttcaa ctgatggaag
     2641 gcttgaaaat cgggtatttg tgtacagctg atcttccatt gaagcgacca actatgcaac
     2701 aagtggttgg gttactcaag gatatcgagc cagtatgagt tagtgaagtt ttcatgttac
     2761 tcgttttgtc attagacgat ctgtttaagg ttttctacga gtctcaaaag gttgttgtta
     2821 tgaaagaaat cgacgaacca gaaaagaaaa tattgtagca acaagtaatt ttgttaaatt
     2881 ttatgtagtg aaatctgtat gttgtaatga atgaatgttg
//
LOCUS       XM_071829993            5093 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dicer-like protein 4
            (LOC139839829), transcript variant X1, mRNA.
ACCESSION   XM_071829993
VERSION     XM_071829993.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5093
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5093
                     /gene="LOC139839829"
                     /note="dicer-like protein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839829"
     CDS             54..4886
                     /gene="LOC139839829"
                     /codon_start=1
                     /product="dicer-like protein 4 isoform X1"
                     /protein_id="XP_071686094.1"
                     /db_xref="GeneID:139839829"
                     /translation="MGNIIEDINLIGGGNQQDNQGSELQLHQIQKDPRTIARKYQTEL
                     CQKALQENIIAYLETGCGKTHIAILLIYEMRCRMIDPKKDICIFLAPTVALVEQQAKV
                     IEDSLDVKVGIFCGSSKMKGHHDWEKALEQFEVLVMTPQILLHNLSHCCIKIEQIALL
                     IFDECHYAQLESNHPYAEIMKIFYKPGLAKLPRIFGMTASPVFGKGASLESLQSLLHA
                     KVEPGSREELDQYVSSPKFNVYYYGTSTNSFLETYGIYCRKLETIKLECMPELLKNIE
                     DHTVSQNTKKALNRRHGSIEFCLENLGLWGALQACQISLKGDLFEQNAVFEEEEQCDS
                     YDDVLCGNYLSSVSNYFASVCKIANGTEADLSCFDTLGVPFISLKLLRLVDVLSNFRA
                     QPDMKCIIFVNRIITARTLARVLKQLRILSAWRCSYLVGVHSSVKSMSRKTTNAILEK
                     FRSGELNLLVATRVGEEGLDIQTCCLVIRFDLPETVASYIQSRGRARMPQSEYAFLVN
                     RANDKELKLVENFQKEETQMNNEISSRTSTVECVEFKEKTYKVDSTGAIISSTSSVSL
                     LHRYCSKLPHDEFFNPKPRLYYTNHDEGIFCSIVLPANAPIHEILGLPQPSMEEAKKD
                     ACLRACQQLHELGALTHYLLPDDEVDDENQDFSDSDSDDEENSRRELHEMRVPSALRE
                     PWIKEEHKKFVLNSYFIKFTPSPADRDYQDFGLFIKARIPQEAEKMKLDLHLARGRSV
                     LTEIVPCGVSEFIDNEIVLAEKFQEMWLKAIIDKSELTMDYVRLGKDDVSNIASTFYL
                     LLPVIVNEHQKSISVDWNLITKCLSSPIFKNPEDIVQTSYMNNCLHLANGPTQINDIL
                     HSFVYVPCKDTFFFVSEFLPDRNSFSVFKDDKSYINHFAEVFQIILLHPNQPLLKVKQ
                     LFRLDNLLRKRGSSEPREKEEHFVELPPEMCVLKIIGFSKEIGSALSLLPSVIHRLES
                     FLVAIELRHRLSASFSEGSEVSVDRILEALTTERCNERFSLERLEVLGDAFLKFAVGR
                     HLFLLNHALDEGQLTRKRSNMVNNSHLFKLAVFNNLHVYIRDQPFEPSHFYPFGRRCS
                     VICNDNTRLNIHSSHESNLKTGANMEVRCNKGHHWLQKKTVADIVEALVGAFIVDSGF
                     KAAIAFLKWIGIPVDFKDSHVANMCASSTDFISLSAQIDIPTLEGLLGYQFQHKGLLL
                     QAFLHPSYHNNCGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLTDLRSLSVNNN
                     SFAGIAVNRSFYKFMLCDSSNLIQSMNKYAEFFKTCSSKDGLVETVPCPKALGDLVES
                     CVGAILLDSGFNLDLVWKIMISFLDPVMKFSALQLNPIRELQELCQFYNWELTFPSVK
                     KDKTFTVEAIVDGKEVCESACASNFNKKTAKRIACQKLYLSLKEKGYKTKMKSLEEVL
                     EVSQKMEAKLIGYDETPTDVVVSLANQLKDVNATELRSVSRKAHAGSENSIQSCSGVR
                     RMVQPMPECSSSNGSANSNLQAPAGLSDALRKSSAKSHLYEICAVNCWKPPLFECFDE
                     IGPAHLKQFAFRVSMTIEEASNTVLECIGDHRAKKKDAAEFAAHGLIWYLKQNGYLQK
                     "
     misc_feature    156..719
                     /gene="LOC139839829"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     Region: DEXHc_dicer; cd18034"
                     /db_xref="CDD:350792"
     misc_feature    order(156..167,174..176,225..248,360..362,543..545,
                     648..650)
                     /gene="LOC139839829"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350792"
     misc_feature    order(324..329,396..401,468..470,474..479,486..488,
                     567..575)
                     /gene="LOC139839829"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:350792"
     misc_feature    1173..1574
                     /gene="LOC139839829"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    1536..1538
                     /gene="LOC139839829"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350171"
     misc_feature    1740..1988
                     /gene="LOC139839829"
                     /note="Dicer dimerization domain; Region: Dicer_dimer;
                     pfam03368"
                     /db_xref="CDD:460900"
     misc_feature    2580..2906
                     /gene="LOC139839829"
                     /note="PAZ domain, named PAZ after the proteins Piwi
                     Argonaut and Zwille. PAZ is found in two families of
                     proteins that are essential components of RNA-mediated
                     gene-silencing pathways, including RNA interference, the
                     piwi and Dicer families. PAZ functions as a...; Region:
                     PAZ; cl00301"
                     /db_xref="CDD:469713"
     misc_feature    order(2658..2660,2721..2723,2733..2735,2787..2789,
                     2865..2867,2871..2873)
                     /gene="LOC139839829"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239207"
     misc_feature    3045..3530
                     /gene="LOC139839829"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; Region: RIBOc;
                     cd00593"
                     /db_xref="CDD:238333"
     misc_feature    order(3093..3098,3105..3110,3117..3119,3126..3131,
                     3138..3143,3147..3155,3183..3185,3474..3476,3501..3503)
                     /gene="LOC139839829"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238333"
     misc_feature    order(3093..3095,3102..3104,3114..3116,3444..3446,
                     3453..3455)
                     /gene="LOC139839829"
                     /note="active site"
                     /db_xref="CDD:238333"
     misc_feature    order(3102..3104,3444..3446,3453..3455)
                     /gene="LOC139839829"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:238333"
     misc_feature    3606..4322
                     /gene="LOC139839829"
                     /note="dsRNA-specific ribonuclease [Transcription];
                     Region: Rnc; COG0571"
                     /db_xref="CDD:440336"
     misc_feature    4656..4865
                     /gene="LOC139839829"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; Region: DSRM_SF; cl00054"
                     /db_xref="CDD:444671"
     misc_feature    order(4656..4658,4662..4664,4734..4736,4809..4817,
                     4824..4826)
                     /gene="LOC139839829"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:380679"
ORIGIN      
        1 ttgactcttg cttcactctt tttattcaag tttatggtca actgagagtc aaaatgggaa
       61 acataattga agacattaat ctcattggag gtggaaatca acaagataat caaggatcgg
      121 aactccaatt gcatcaaatt caaaaagatc ccagaacaat tgcaagaaag taccaaactg
      181 aattatgtca aaaggctttg caggagaata ttatcgcgta tctagaaaca ggttgtggca
      241 agactcacat tgctattttg cttatttacg agatgcgttg ccgaatgatt gatcccaaga
      301 aggatatatg tatttttctt gctcccacag tagctctggt cgaacaacaa gccaaggtta
      361 tagaagattc tttagatgta aaagttggaa tcttttgtgg gagttcaaag atgaagggtc
      421 atcatgattg ggagaaggcg ttagaacaat ttgaggtcct tgtcatgacc ccacagattc
      481 tgttacataa tctatcacat tgctgcatca aaattgagca gattgccctt ttgatatttg
      541 atgagtgcca ttatgcacaa cttgaaagca atcatcctta tgctgaaatc atgaagatat
      601 tttacaaacc aggtcttgct aaactccccc gtatatttgg catgactgcg tcaccagtat
      661 ttgggaaagg tgcttccctt gagagtcttc agagcttact tcatgctaag gttgaaccgg
      721 gatcgagaga agagctagac caatatgtgt catcgcccaa atttaatgtt tactattatg
      781 gtacctccac aaacagtttt cttgagacgt atggaattta ttgtcggaaa cttgaaacta
      841 ttaagctcga gtgtatgcct gaattgctca agaatatcga ggatcatact gtttctcaga
      901 acaccaaaaa ggcacttaat cgtcgtcatg gaagtataga gttttgcttg gaaaatcttg
      961 gcctttgggg agcattgcaa gcttgccaga tctcgttaaa aggtgaccta tttgagcaaa
     1021 atgcagtttt tgaagaagaa gagcaatgtg acagttatga cgatgttctg tgtggcaatt
     1081 atctatcgtc agtttctaac tactttgcta gcgtatgcaa aatagcaaac ggcaccgaag
     1141 ctgatttatc gtgttttgac actttgggag ttccgtttat ctcgttaaag ctcttacgac
     1201 tagtggacgt tctttctaat tttagggcac aaccggatat gaaatgtata atatttgtga
     1261 atagaatcat aacagcgaga acattggcac gtgtccttaa acaacttagg attttgtcag
     1321 cttggaggtg cagttacctg gtaggggtcc actcatccgt caagagtatg tcacggaaaa
     1381 caacaaacgc tattcttgag aagtttcgct ctggtgagct gaatttgtta gtagcaacta
     1441 gggtgggtga agaaggactt gatatccaaa catgttgcct tgtaataaga ttcgatcttc
     1501 ctgaaaccgt tgctagttat atacaatcaa gaggtcgtgc acgcatgcca caatctgaat
     1561 atgccttttt ggtgaacaga gcaaatgata aggagctgaa gttggtagag aattttcaaa
     1621 aggaggaaac acaaatgaat aatgagatat cgtcacgaac atctactgtt gaatgtgttg
     1681 agtttaagga gaaaacatat aaagtagatt caacgggtgc cattattagt tctacatcta
     1741 gtgtttcgtt acttcatcga tattgctcaa agcttccaca tgacgaattc tttaacccta
     1801 agccaaggct ttattacact aatcatgatg agggtatatt ttgctccata gttcttcctg
     1861 ctaatgctcc tattcacgaa atcctaggtt tgccccaacc atctatggag gaagcaaaga
     1921 aagatgcttg tttgagagcg tgtcaacagt tacatgaatt gggtgccttg acacactatc
     1981 tattacccga cgatgaagtt gatgatgaaa atcaagattt ttctgattca gatagcgatg
     2041 atgaggagaa ctcgcgaaga gagctacatg agatgcgtgt accatctgct ttacgggaac
     2101 catggattaa agaggaacat aaaaaattcg ttcttaactc gtatttcata aaatttactc
     2161 cttcgcctgc tgatagagat tatcaagatt ttggtttatt tataaaggca cgcatacctc
     2221 aagaggcaga aaaaatgaaa ctagatctcc atttggctcg tggtcgaagc gtgttgacag
     2281 agattgttcc ttgtggtgtt tcagagttta tagacaacga gattgtccta gcggagaaat
     2341 ttcaagagat gtggctgaaa gctataatag acaagtcaga attgactatg gattatgttc
     2401 gattaggcaa agatgatgtc agcaatatag cctcgacgtt ttacttattg ctacccgtga
     2461 ttgttaatga acaccaaaaa tcaatttctg tggactggaa cctcattact aaatgcttat
     2521 catcaccaat tttcaaaaat ccagaagata ttgtgcaaac gtcttacatg aataattgtt
     2581 tgcatctcgc caacgggccc actcagatca atgacatatt acatagtttt gtatatgtcc
     2641 cttgcaagga tacttttttc tttgtttcag aatttcttcc tgatcgaaat tcattcagcg
     2701 tgtttaaaga tgataaaagc tacattaatc attttgctga agtgttccaa attatattat
     2761 tgcacccgaa ccagcctctt ttgaaagtaa aacaactctt tcgtttagac aatctactga
     2821 ggaagagagg aagttccgaa ccacgcgaaa aggaagagca ttttgtggag ttacctcccg
     2881 aaatgtgtgt actgaaaatt atcgggtttt cgaaggaaat tggaagtgcg ctgtctttat
     2941 tgccgtccgt tatacaccga ttagaaagct ttcttgttgc aattgaattg agacataggt
     3001 tatctgcttc attctctgaa gggtccgaag tttctgtaga tcgtattctt gaagcactta
     3061 caaccgagag atgcaatgag cggttttctc ttgagaggct tgaggttttg ggtgatgctt
     3121 ttcttaagtt tgcagttgga cgacaccttt tcctattaaa ccacgccctc gatgaaggac
     3181 aacttactcg gaaacgttca aatatggtta acaattccca tttattcaag ctggcggtat
     3241 tcaacaattt gcatgtatat atacgtgatc aaccatttga gccgtcccat ttttatccct
     3301 ttggtcgaag atgttcggtg atatgtaacg ataacacgag actgaacatc cattcttcgc
     3361 acgaaagcaa tttaaagact ggtgcaaaca tggaagttag atgcaataaa ggccatcatt
     3421 ggctacaaaa gaaaaccgta gcagacattg ttgaagctct tgtaggagcg tttatagttg
     3481 atagcggttt taaagccgca atcgcgtttc taaaatggat tggtattcca gttgacttta
     3541 aagattccca tgttgctaac atgtgcgctt caagcacgga ctttatttct ttgagtgcgc
     3601 aaattgacat tcctaccctt gaaggccttt tagggtatca gtttcaacat aaaggccttc
     3661 tcttacaggc gttcttacat ccatcttacc ataataattg cggtggctgc tatcagagat
     3721 tggagtttct tggagacgcg gtattggatt acttgatcac atcttatctt tattcggtgt
     3781 atccgaactt aaagccgggt cagttgaccg atctaagatc cttatcagtc aacaataatt
     3841 ccttcgctgg tatagctgtt aatagatcgt tctacaagtt tatgctatgc gattctagta
     3901 atttgattca gtcaatgaat aagtacgccg aattctttaa gacttgttcg tcaaaagacg
     3961 gtttggttga aactgtacca tgtcctaagg ctcttggtga tttggtggaa tcgtgtgttg
     4021 gtgcgattct tcttgattcg ggattcaatt tggatttagt ttggaagata atgatctcgt
     4081 ttttggatcc cgtcatgaag ttttcagcat tgcagcttaa tcccataaga gaacttcaag
     4141 aactttgcca gttttataat tgggaattga cgtttccatc ggttaagaaa gataaaacgt
     4201 ttacggttga agcaatcgtt gacggaaaag aagtttgtga gagtgcttgt gcttccaatt
     4261 ttaacaaaaa aaccgccaag agaattgcgt gtcagaaatt gtatttgtca ttgaaggaaa
     4321 aaggttacaa aacaaagatg aaatctttgg aggaagttct ggaagtcagc caaaagatgg
     4381 aagcgaaatt aatcggatac gatgaaacac caacagatgt agttgtttca cttgccaacc
     4441 aacttaaaga cgttaacgca actgaactta gaagcgtttc tcgaaaagcg catgccggtt
     4501 ctgaaaattc tatacaaagt tgtagcggtg ttagacgtat ggtgcagccg atgcctgaat
     4561 gcagttcttc aaatggcagt gctaatagca atttacaagc accagcaggt ttaagtgatg
     4621 cgttgcgtaa atcatcagca aaatcacatc tgtatgaaat atgtgctgtc aactgttgga
     4681 aacccccatt gtttgaatgt tttgacgaaa taggacccgc acacctcaaa cagtttgcat
     4741 ttagagtgag tatgacaatc gaagaagctt caaatacagt tttggagtgt attggagatc
     4801 atcgagctaa gaagaaagat gctgctgagt ttgccgctca tgggttgatt tggtacttga
     4861 agcaaaatgg gtatctacaa aagtagattt tggagcttct ttcggtcact ttaagtgtat
     4921 attatcagaa tatgtaggga ttattgacac cttgaactaa tgggcattag taccatagag
     4981 ccctgtatcg gagacataaa acttatacac cattattaaa gttgtatgcc taatcatgac
     5041 acaattatgt gtctgactta gttatcttcc ttcttacata ttagtggtct ttt
//
LOCUS       XM_071829994            5088 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dicer-like protein 4
            (LOC139839829), transcript variant X2, mRNA.
ACCESSION   XM_071829994
VERSION     XM_071829994.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5088
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5088
                     /gene="LOC139839829"
                     /note="dicer-like protein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139839829"
     CDS             55..4881
                     /gene="LOC139839829"
                     /codon_start=1
                     /product="dicer-like protein 4 isoform X2"
                     /protein_id="XP_071686095.1"
                     /db_xref="GeneID:139839829"
                     /translation="MGNIIEDINLIGGGNQQDNQGSELQLHQIQKDPRTIARKYQTEL
                     CQKALQENIIAYLETGCGKTHIAILLIYEMRCRMIDPKKDICIFLAPTVALVEQQAKV
                     IEDSLDVKVGIFCGSSKMKGHHDWEKALEQFEVLVMTPQILLHNLSHCCIKIEQIALL
                     IFDECHYAQLESNHPYAEIMKIFYKPGLAKLPRIFGMTASPVFGKGASLESLQSLLHA
                     KVEPGSREELDQYVSSPKFNVYYYGTSTNSFLETYGIYCRKLETIKLECMPELLKNIE
                     DHTVSQNTKKALNRRHGSIEFCLENLGLWGALQACQISLKGDLFEQNAVFEEEEQCDS
                     YDDVLCGNYLSSVSNYFASVCKIANGTEADLSCFDTLGVPFISLKLLRLVDVLSNFRA
                     QPDMKCIIFVNRIITARTLARVLKQLRILSAWRCSYLVGVHSSVKSMSRKTTNAILEK
                     FRSGELNLLVATRVGEEGLDIQTCCLVIRFDLPETVASYIQSRGRARMPQSEYAFLVN
                     RANDKELKLVENFQKEETQMNNEISSRTSTVECVEFKEKTYKVDSTGAIISSTSSVSL
                     LHRYCSKLPHDEFFNPKPRLYYTNHDEGIFCSIVLPANAPIHEILGLPQPSMEEAKKD
                     ACLRACQQLHELGALTHYLLPDDEVDDENQDFSDSDSDDEENSRRELHEMRVPSALRE
                     PWIKEEHKKFVLNSYFIKFTPSPADRDYQDFGLFIKARIPQEAEKMKLDLHLARGRSV
                     LTEIVPCGVSEFIDNEIVLAEKFQEMWLKAIIDKSELTMDYVRLGKDDVSNIASTFYL
                     LLPVIVNEHQKSISVDWNLITKCLSSPIFKNPEDIVQTSYMNNCLHLANGPTQINDIL
                     HSFVYVPCKDTFFFVSEFLPDRNSFSVFKDDKSYINHFAEVFQIILLHPNQPLLKVKQ
                     LFRLDNLLRKRGSSEPREKEEHFVELPPEMCVLKIIGFSKEIGSALSLLPSVIHRLES
                     FLVAIELRHRLSASFSEGSEVSVDRILEALTTERCNERFSLERLEVLGDAFLKFAVGR
                     HLFLLNHALDEGQLTRKRSNMVNNSHLFKLAVFNNLHVYIRDQPFEPSHFYPFGRRCS
                     VICNDNTRLNIHSSHESNLKTGANMEVRCNKGHHWLQKKTVADIVEALVGAFIVDSGF
                     KAAIAFLKWIGIPVDFKDSHVANMCASSTDFISLSAQIDIPTLEGLLGYQFQHKGLLL
                     QAFLHPSYHNNCGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLTDLRSLSVNNN
                     SFAGIAVNRSFYKFMLCDSSNLIQSMNKYAEFFKTCSSKDGLVETVPCPKALGDLVES
                     CVGAILLDSGFNLDLVWKIMISFLDPVMKFSALQLNPIRELQELCQFYNWELTFPSVK
                     KDKTFTVEAIVDGKEVCESACASNFNKKTAKRIACQKLYLSLKEKGYKTKMKSLEEVL
                     EVSQKMEAKLIGYDETPTDVVVSLANQLKDVNATELRSVSRKAHAGSENSIQSCSGVR
                     RMVQPMPECSSSNGSANSNLQAPAGDALRKSSAKSHLYEICAVNCWKPPLFECFDEIG
                     PAHLKQFAFRVSMTIEEASNTVLECIGDHRAKKKDAAEFAAHGLIWYLKQNGYLQK"
     misc_feature    157..720
                     /gene="LOC139839829"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     Region: DEXHc_dicer; cd18034"
                     /db_xref="CDD:350792"
     misc_feature    order(157..168,175..177,226..249,361..363,544..546,
                     649..651)
                     /gene="LOC139839829"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350792"
     misc_feature    order(325..330,397..402,469..471,475..480,487..489,
                     568..576)
                     /gene="LOC139839829"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:350792"
     misc_feature    1174..1575
                     /gene="LOC139839829"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    1537..1539
                     /gene="LOC139839829"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350171"
     misc_feature    1741..1989
                     /gene="LOC139839829"
                     /note="Dicer dimerization domain; Region: Dicer_dimer;
                     pfam03368"
                     /db_xref="CDD:460900"
     misc_feature    2581..2907
                     /gene="LOC139839829"
                     /note="PAZ domain, named PAZ after the proteins Piwi
                     Argonaut and Zwille. PAZ is found in two families of
                     proteins that are essential components of RNA-mediated
                     gene-silencing pathways, including RNA interference, the
                     piwi and Dicer families. PAZ functions as a...; Region:
                     PAZ; cl00301"
                     /db_xref="CDD:469713"
     misc_feature    order(2659..2661,2722..2724,2734..2736,2788..2790,
                     2866..2868,2872..2874)
                     /gene="LOC139839829"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239207"
     misc_feature    3046..3531
                     /gene="LOC139839829"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; Region: RIBOc;
                     cd00593"
                     /db_xref="CDD:238333"
     misc_feature    order(3094..3099,3106..3111,3118..3120,3127..3132,
                     3139..3144,3148..3156,3184..3186,3475..3477,3502..3504)
                     /gene="LOC139839829"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238333"
     misc_feature    order(3094..3096,3103..3105,3115..3117,3445..3447,
                     3454..3456)
                     /gene="LOC139839829"
                     /note="active site"
                     /db_xref="CDD:238333"
     misc_feature    order(3103..3105,3445..3447,3454..3456)
                     /gene="LOC139839829"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:238333"
     misc_feature    3607..4323
                     /gene="LOC139839829"
                     /note="dsRNA-specific ribonuclease [Transcription];
                     Region: Rnc; COG0571"
                     /db_xref="CDD:440336"
     misc_feature    4651..4860
                     /gene="LOC139839829"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; Region: DSRM_SF; cl00054"
                     /db_xref="CDD:444671"
     misc_feature    order(4651..4653,4657..4659,4729..4731,4804..4812,
                     4819..4821)
                     /gene="LOC139839829"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:380679"
ORIGIN      
        1 attgactctt gcttcactct ttttattcaa gtttatggtc aactgagagt caaaatggga
       61 aacataattg aagacattaa tctcattgga ggtggaaatc aacaagataa tcaaggatcg
      121 gaactccaat tgcatcaaat tcaaaaagat cccagaacaa ttgcaagaaa gtaccaaact
      181 gaattatgtc aaaaggcttt gcaggagaat attatcgcgt atctagaaac aggttgtggc
      241 aagactcaca ttgctatttt gcttatttac gagatgcgtt gccgaatgat tgatcccaag
      301 aaggatatat gtatttttct tgctcccaca gtagctctgg tcgaacaaca agccaaggtt
      361 atagaagatt ctttagatgt aaaagttgga atcttttgtg ggagttcaaa gatgaagggt
      421 catcatgatt gggagaaggc gttagaacaa tttgaggtcc ttgtcatgac cccacagatt
      481 ctgttacata atctatcaca ttgctgcatc aaaattgagc agattgccct tttgatattt
      541 gatgagtgcc attatgcaca acttgaaagc aatcatcctt atgctgaaat catgaagata
      601 ttttacaaac caggtcttgc taaactcccc cgtatatttg gcatgactgc gtcaccagta
      661 tttgggaaag gtgcttccct tgagagtctt cagagcttac ttcatgctaa ggttgaaccg
      721 ggatcgagag aagagctaga ccaatatgtg tcatcgccca aatttaatgt ttactattat
      781 ggtacctcca caaacagttt tcttgagacg tatggaattt attgtcggaa acttgaaact
      841 attaagctcg agtgtatgcc tgaattgctc aagaatatcg aggatcatac tgtttctcag
      901 aacaccaaaa aggcacttaa tcgtcgtcat ggaagtatag agttttgctt ggaaaatctt
      961 ggcctttggg gagcattgca agcttgccag atctcgttaa aaggtgacct atttgagcaa
     1021 aatgcagttt ttgaagaaga agagcaatgt gacagttatg acgatgttct gtgtggcaat
     1081 tatctatcgt cagtttctaa ctactttgct agcgtatgca aaatagcaaa cggcaccgaa
     1141 gctgatttat cgtgttttga cactttggga gttccgttta tctcgttaaa gctcttacga
     1201 ctagtggacg ttctttctaa ttttagggca caaccggata tgaaatgtat aatatttgtg
     1261 aatagaatca taacagcgag aacattggca cgtgtcctta aacaacttag gattttgtca
     1321 gcttggaggt gcagttacct ggtaggggtc cactcatccg tcaagagtat gtcacggaaa
     1381 acaacaaacg ctattcttga gaagtttcgc tctggtgagc tgaatttgtt agtagcaact
     1441 agggtgggtg aagaaggact tgatatccaa acatgttgcc ttgtaataag attcgatctt
     1501 cctgaaaccg ttgctagtta tatacaatca agaggtcgtg cacgcatgcc acaatctgaa
     1561 tatgcctttt tggtgaacag agcaaatgat aaggagctga agttggtaga gaattttcaa
     1621 aaggaggaaa cacaaatgaa taatgagata tcgtcacgaa catctactgt tgaatgtgtt
     1681 gagtttaagg agaaaacata taaagtagat tcaacgggtg ccattattag ttctacatct
     1741 agtgtttcgt tacttcatcg atattgctca aagcttccac atgacgaatt ctttaaccct
     1801 aagccaaggc tttattacac taatcatgat gagggtatat tttgctccat agttcttcct
     1861 gctaatgctc ctattcacga aatcctaggt ttgccccaac catctatgga ggaagcaaag
     1921 aaagatgctt gtttgagagc gtgtcaacag ttacatgaat tgggtgcctt gacacactat
     1981 ctattacccg acgatgaagt tgatgatgaa aatcaagatt tttctgattc agatagcgat
     2041 gatgaggaga actcgcgaag agagctacat gagatgcgtg taccatctgc tttacgggaa
     2101 ccatggatta aagaggaaca taaaaaattc gttcttaact cgtatttcat aaaatttact
     2161 ccttcgcctg ctgatagaga ttatcaagat tttggtttat ttataaaggc acgcatacct
     2221 caagaggcag aaaaaatgaa actagatctc catttggctc gtggtcgaag cgtgttgaca
     2281 gagattgttc cttgtggtgt ttcagagttt atagacaacg agattgtcct agcggagaaa
     2341 tttcaagaga tgtggctgaa agctataata gacaagtcag aattgactat ggattatgtt
     2401 cgattaggca aagatgatgt cagcaatata gcctcgacgt tttacttatt gctacccgtg
     2461 attgttaatg aacaccaaaa atcaatttct gtggactgga acctcattac taaatgctta
     2521 tcatcaccaa ttttcaaaaa tccagaagat attgtgcaaa cgtcttacat gaataattgt
     2581 ttgcatctcg ccaacgggcc cactcagatc aatgacatat tacatagttt tgtatatgtc
     2641 ccttgcaagg atactttttt ctttgtttca gaatttcttc ctgatcgaaa ttcattcagc
     2701 gtgtttaaag atgataaaag ctacattaat cattttgctg aagtgttcca aattatatta
     2761 ttgcacccga accagcctct tttgaaagta aaacaactct ttcgtttaga caatctactg
     2821 aggaagagag gaagttccga accacgcgaa aaggaagagc attttgtgga gttacctccc
     2881 gaaatgtgtg tactgaaaat tatcgggttt tcgaaggaaa ttggaagtgc gctgtcttta
     2941 ttgccgtccg ttatacaccg attagaaagc tttcttgttg caattgaatt gagacatagg
     3001 ttatctgctt cattctctga agggtccgaa gtttctgtag atcgtattct tgaagcactt
     3061 acaaccgaga gatgcaatga gcggttttct cttgagaggc ttgaggtttt gggtgatgct
     3121 tttcttaagt ttgcagttgg acgacacctt ttcctattaa accacgccct cgatgaagga
     3181 caacttactc ggaaacgttc aaatatggtt aacaattccc atttattcaa gctggcggta
     3241 ttcaacaatt tgcatgtata tatacgtgat caaccatttg agccgtccca tttttatccc
     3301 tttggtcgaa gatgttcggt gatatgtaac gataacacga gactgaacat ccattcttcg
     3361 cacgaaagca atttaaagac tggtgcaaac atggaagtta gatgcaataa aggccatcat
     3421 tggctacaaa agaaaaccgt agcagacatt gttgaagctc ttgtaggagc gtttatagtt
     3481 gatagcggtt ttaaagccgc aatcgcgttt ctaaaatgga ttggtattcc agttgacttt
     3541 aaagattccc atgttgctaa catgtgcgct tcaagcacgg actttatttc tttgagtgcg
     3601 caaattgaca ttcctaccct tgaaggcctt ttagggtatc agtttcaaca taaaggcctt
     3661 ctcttacagg cgttcttaca tccatcttac cataataatt gcggtggctg ctatcagaga
     3721 ttggagtttc ttggagacgc ggtattggat tacttgatca catcttatct ttattcggtg
     3781 tatccgaact taaagccggg tcagttgacc gatctaagat ccttatcagt caacaataat
     3841 tccttcgctg gtatagctgt taatagatcg ttctacaagt ttatgctatg cgattctagt
     3901 aatttgattc agtcaatgaa taagtacgcc gaattcttta agacttgttc gtcaaaagac
     3961 ggtttggttg aaactgtacc atgtcctaag gctcttggtg atttggtgga atcgtgtgtt
     4021 ggtgcgattc ttcttgattc gggattcaat ttggatttag tttggaagat aatgatctcg
     4081 tttttggatc ccgtcatgaa gttttcagca ttgcagctta atcccataag agaacttcaa
     4141 gaactttgcc agttttataa ttgggaattg acgtttccat cggttaagaa agataaaacg
     4201 tttacggttg aagcaatcgt tgacggaaaa gaagtttgtg agagtgcttg tgcttccaat
     4261 tttaacaaaa aaaccgccaa gagaattgcg tgtcagaaat tgtatttgtc attgaaggaa
     4321 aaaggttaca aaacaaagat gaaatctttg gaggaagttc tggaagtcag ccaaaagatg
     4381 gaagcgaaat taatcggata cgatgaaaca ccaacagatg tagttgtttc acttgccaac
     4441 caacttaaag acgttaacgc aactgaactt agaagcgttt ctcgaaaagc gcatgccggt
     4501 tctgaaaatt ctatacaaag ttgtagcggt gttagacgta tggtgcagcc gatgcctgaa
     4561 tgcagttctt caaatggcag tgctaatagc aatttacaag caccagcagg tgatgcgttg
     4621 cgtaaatcat cagcaaaatc acatctgtat gaaatatgtg ctgtcaactg ttggaaaccc
     4681 ccattgtttg aatgttttga cgaaatagga cccgcacacc tcaaacagtt tgcatttaga
     4741 gtgagtatga caatcgaaga agcttcaaat acagttttgg agtgtattgg agatcatcga
     4801 gctaagaaga aagatgctgc tgagtttgcc gctcatgggt tgatttggta cttgaagcaa
     4861 aatgggtatc tacaaaagta gattttggag cttctttcgg tcactttaag tgtatattat
     4921 cagaatatgt agggattatt gacaccttga actaatgggc attagtacca tagagccctg
     4981 tatcggagac ataaaactta tacaccatta ttaaagttgt atgcctaatc atgacacaat
     5041 tatgtgtctg acttagttat cttccttctt acatattagt ggtctttt
//
LOCUS       XM_071829995            4940 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dicer-like protein 4
            (LOC139839829), transcript variant X3, mRNA.
ACCESSION   XM_071829995
VERSION     XM_071829995.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4940
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4940
                     /gene="LOC139839829"
                     /note="dicer-like protein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139839829"
     CDS             120..4733
                     /gene="LOC139839829"
                     /codon_start=1
                     /product="dicer-like protein 4 isoform X3"
                     /protein_id="XP_071686096.1"
                     /db_xref="GeneID:139839829"
                     /translation="MRCRMIDPKKDICIFLAPTVALVEQQAKVIEDSLDVKVGIFCGS
                     SKMKGHHDWEKALEQFEVLVMTPQILLHNLSHCCIKIEQIALLIFDECHYAQLESNHP
                     YAEIMKIFYKPGLAKLPRIFGMTASPVFGKGASLESLQSLLHAKVEPGSREELDQYVS
                     SPKFNVYYYGTSTNSFLETYGIYCRKLETIKLECMPELLKNIEDHTVSQNTKKALNRR
                     HGSIEFCLENLGLWGALQACQISLKGDLFEQNAVFEEEEQCDSYDDVLCGNYLSSVSN
                     YFASVCKIANGTEADLSCFDTLGVPFISLKLLRLVDVLSNFRAQPDMKCIIFVNRIIT
                     ARTLARVLKQLRILSAWRCSYLVGVHSSVKSMSRKTTNAILEKFRSGELNLLVATRVG
                     EEGLDIQTCCLVIRFDLPETVASYIQSRGRARMPQSEYAFLVNRANDKELKLVENFQK
                     EETQMNNEISSRTSTVECVEFKEKTYKVDSTGAIISSTSSVSLLHRYCSKLPHDEFFN
                     PKPRLYYTNHDEGIFCSIVLPANAPIHEILGLPQPSMEEAKKDACLRACQQLHELGAL
                     THYLLPDDEVDDENQDFSDSDSDDEENSRRELHEMRVPSALREPWIKEEHKKFVLNSY
                     FIKFTPSPADRDYQDFGLFIKARIPQEAEKMKLDLHLARGRSVLTEIVPCGVSEFIDN
                     EIVLAEKFQEMWLKAIIDKSELTMDYVRLGKDDVSNIASTFYLLLPVIVNEHQKSISV
                     DWNLITKCLSSPIFKNPEDIVQTSYMNNCLHLANGPTQINDILHSFVYVPCKDTFFFV
                     SEFLPDRNSFSVFKDDKSYINHFAEVFQIILLHPNQPLLKVKQLFRLDNLLRKRGSSE
                     PREKEEHFVELPPEMCVLKIIGFSKEIGSALSLLPSVIHRLESFLVAIELRHRLSASF
                     SEGSEVSVDRILEALTTERCNERFSLERLEVLGDAFLKFAVGRHLFLLNHALDEGQLT
                     RKRSNMVNNSHLFKLAVFNNLHVYIRDQPFEPSHFYPFGRRCSVICNDNTRLNIHSSH
                     ESNLKTGANMEVRCNKGHHWLQKKTVADIVEALVGAFIVDSGFKAAIAFLKWIGIPVD
                     FKDSHVANMCASSTDFISLSAQIDIPTLEGLLGYQFQHKGLLLQAFLHPSYHNNCGGC
                     YQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLTDLRSLSVNNNSFAGIAVNRSFYKFM
                     LCDSSNLIQSMNKYAEFFKTCSSKDGLVETVPCPKALGDLVESCVGAILLDSGFNLDL
                     VWKIMISFLDPVMKFSALQLNPIRELQELCQFYNWELTFPSVKKDKTFTVEAIVDGKE
                     VCESACASNFNKKTAKRIACQKLYLSLKEKGYKTKMKSLEEVLEVSQKMEAKLIGYDE
                     TPTDVVVSLANQLKDVNATELRSVSRKAHAGSENSIQSCSGVRRMVQPMPECSSSNGS
                     ANSNLQAPAGLSDALRKSSAKSHLYEICAVNCWKPPLFECFDEIGPAHLKQFAFRVSM
                     TIEEASNTVLECIGDHRAKKKDAAEFAAHGLIWYLKQNGYLQK"
     misc_feature    <123..566
                     /gene="LOC139839829"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    1020..1421
                     /gene="LOC139839829"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    1383..1385
                     /gene="LOC139839829"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350171"
     misc_feature    1587..1835
                     /gene="LOC139839829"
                     /note="Dicer dimerization domain; Region: Dicer_dimer;
                     pfam03368"
                     /db_xref="CDD:460900"
     misc_feature    2427..2753
                     /gene="LOC139839829"
                     /note="PAZ domain, named PAZ after the proteins Piwi
                     Argonaut and Zwille. PAZ is found in two families of
                     proteins that are essential components of RNA-mediated
                     gene-silencing pathways, including RNA interference, the
                     piwi and Dicer families. PAZ functions as a...; Region:
                     PAZ; cl00301"
                     /db_xref="CDD:469713"
     misc_feature    order(2505..2507,2568..2570,2580..2582,2634..2636,
                     2712..2714,2718..2720)
                     /gene="LOC139839829"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239207"
     misc_feature    2892..3377
                     /gene="LOC139839829"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; Region: RIBOc;
                     cd00593"
                     /db_xref="CDD:238333"
     misc_feature    order(2940..2945,2952..2957,2964..2966,2973..2978,
                     2985..2990,2994..3002,3030..3032,3321..3323,3348..3350)
                     /gene="LOC139839829"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238333"
     misc_feature    order(2940..2942,2949..2951,2961..2963,3291..3293,
                     3300..3302)
                     /gene="LOC139839829"
                     /note="active site"
                     /db_xref="CDD:238333"
     misc_feature    order(2949..2951,3291..3293,3300..3302)
                     /gene="LOC139839829"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:238333"
     misc_feature    3453..4169
                     /gene="LOC139839829"
                     /note="dsRNA-specific ribonuclease [Transcription];
                     Region: Rnc; COG0571"
                     /db_xref="CDD:440336"
     misc_feature    4503..4712
                     /gene="LOC139839829"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; Region: DSRM_SF; cl00054"
                     /db_xref="CDD:444671"
     misc_feature    order(4503..4505,4509..4511,4581..4583,4656..4664,
                     4671..4673)
                     /gene="LOC139839829"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:380679"
ORIGIN      
        1 tttatttatc catctagtac caaactgaat tatgtcaaaa ggctttgcag gagaatatta
       61 tcgcgtatct agaaacaggt tgtggcaaga ctcacattgc tattttgctt atttacgaga
      121 tgcgttgccg aatgattgat cccaagaagg atatatgtat ttttcttgct cccacagtag
      181 ctctggtcga acaacaagcc aaggttatag aagattcttt agatgtaaaa gttggaatct
      241 tttgtgggag ttcaaagatg aagggtcatc atgattggga gaaggcgtta gaacaatttg
      301 aggtccttgt catgacccca cagattctgt tacataatct atcacattgc tgcatcaaaa
      361 ttgagcagat tgcccttttg atatttgatg agtgccatta tgcacaactt gaaagcaatc
      421 atccttatgc tgaaatcatg aagatatttt acaaaccagg tcttgctaaa ctcccccgta
      481 tatttggcat gactgcgtca ccagtatttg ggaaaggtgc ttcccttgag agtcttcaga
      541 gcttacttca tgctaaggtt gaaccgggat cgagagaaga gctagaccaa tatgtgtcat
      601 cgcccaaatt taatgtttac tattatggta cctccacaaa cagttttctt gagacgtatg
      661 gaatttattg tcggaaactt gaaactatta agctcgagtg tatgcctgaa ttgctcaaga
      721 atatcgagga tcatactgtt tctcagaaca ccaaaaaggc acttaatcgt cgtcatggaa
      781 gtatagagtt ttgcttggaa aatcttggcc tttggggagc attgcaagct tgccagatct
      841 cgttaaaagg tgacctattt gagcaaaatg cagtttttga agaagaagag caatgtgaca
      901 gttatgacga tgttctgtgt ggcaattatc tatcgtcagt ttctaactac tttgctagcg
      961 tatgcaaaat agcaaacggc accgaagctg atttatcgtg ttttgacact ttgggagttc
     1021 cgtttatctc gttaaagctc ttacgactag tggacgttct ttctaatttt agggcacaac
     1081 cggatatgaa atgtataata tttgtgaata gaatcataac agcgagaaca ttggcacgtg
     1141 tccttaaaca acttaggatt ttgtcagctt ggaggtgcag ttacctggta ggggtccact
     1201 catccgtcaa gagtatgtca cggaaaacaa caaacgctat tcttgagaag tttcgctctg
     1261 gtgagctgaa tttgttagta gcaactaggg tgggtgaaga aggacttgat atccaaacat
     1321 gttgccttgt aataagattc gatcttcctg aaaccgttgc tagttatata caatcaagag
     1381 gtcgtgcacg catgccacaa tctgaatatg cctttttggt gaacagagca aatgataagg
     1441 agctgaagtt ggtagagaat tttcaaaagg aggaaacaca aatgaataat gagatatcgt
     1501 cacgaacatc tactgttgaa tgtgttgagt ttaaggagaa aacatataaa gtagattcaa
     1561 cgggtgccat tattagttct acatctagtg tttcgttact tcatcgatat tgctcaaagc
     1621 ttccacatga cgaattcttt aaccctaagc caaggcttta ttacactaat catgatgagg
     1681 gtatattttg ctccatagtt cttcctgcta atgctcctat tcacgaaatc ctaggtttgc
     1741 cccaaccatc tatggaggaa gcaaagaaag atgcttgttt gagagcgtgt caacagttac
     1801 atgaattggg tgccttgaca cactatctat tacccgacga tgaagttgat gatgaaaatc
     1861 aagatttttc tgattcagat agcgatgatg aggagaactc gcgaagagag ctacatgaga
     1921 tgcgtgtacc atctgcttta cgggaaccat ggattaaaga ggaacataaa aaattcgttc
     1981 ttaactcgta tttcataaaa tttactcctt cgcctgctga tagagattat caagattttg
     2041 gtttatttat aaaggcacgc atacctcaag aggcagaaaa aatgaaacta gatctccatt
     2101 tggctcgtgg tcgaagcgtg ttgacagaga ttgttccttg tggtgtttca gagtttatag
     2161 acaacgagat tgtcctagcg gagaaatttc aagagatgtg gctgaaagct ataatagaca
     2221 agtcagaatt gactatggat tatgttcgat taggcaaaga tgatgtcagc aatatagcct
     2281 cgacgtttta cttattgcta cccgtgattg ttaatgaaca ccaaaaatca atttctgtgg
     2341 actggaacct cattactaaa tgcttatcat caccaatttt caaaaatcca gaagatattg
     2401 tgcaaacgtc ttacatgaat aattgtttgc atctcgccaa cgggcccact cagatcaatg
     2461 acatattaca tagttttgta tatgtccctt gcaaggatac ttttttcttt gtttcagaat
     2521 ttcttcctga tcgaaattca ttcagcgtgt ttaaagatga taaaagctac attaatcatt
     2581 ttgctgaagt gttccaaatt atattattgc acccgaacca gcctcttttg aaagtaaaac
     2641 aactctttcg tttagacaat ctactgagga agagaggaag ttccgaacca cgcgaaaagg
     2701 aagagcattt tgtggagtta cctcccgaaa tgtgtgtact gaaaattatc gggttttcga
     2761 aggaaattgg aagtgcgctg tctttattgc cgtccgttat acaccgatta gaaagctttc
     2821 ttgttgcaat tgaattgaga cataggttat ctgcttcatt ctctgaaggg tccgaagttt
     2881 ctgtagatcg tattcttgaa gcacttacaa ccgagagatg caatgagcgg ttttctcttg
     2941 agaggcttga ggttttgggt gatgcttttc ttaagtttgc agttggacga caccttttcc
     3001 tattaaacca cgccctcgat gaaggacaac ttactcggaa acgttcaaat atggttaaca
     3061 attcccattt attcaagctg gcggtattca acaatttgca tgtatatata cgtgatcaac
     3121 catttgagcc gtcccatttt tatccctttg gtcgaagatg ttcggtgata tgtaacgata
     3181 acacgagact gaacatccat tcttcgcacg aaagcaattt aaagactggt gcaaacatgg
     3241 aagttagatg caataaaggc catcattggc tacaaaagaa aaccgtagca gacattgttg
     3301 aagctcttgt aggagcgttt atagttgata gcggttttaa agccgcaatc gcgtttctaa
     3361 aatggattgg tattccagtt gactttaaag attcccatgt tgctaacatg tgcgcttcaa
     3421 gcacggactt tatttctttg agtgcgcaaa ttgacattcc tacccttgaa ggccttttag
     3481 ggtatcagtt tcaacataaa ggccttctct tacaggcgtt cttacatcca tcttaccata
     3541 ataattgcgg tggctgctat cagagattgg agtttcttgg agacgcggta ttggattact
     3601 tgatcacatc ttatctttat tcggtgtatc cgaacttaaa gccgggtcag ttgaccgatc
     3661 taagatcctt atcagtcaac aataattcct tcgctggtat agctgttaat agatcgttct
     3721 acaagtttat gctatgcgat tctagtaatt tgattcagtc aatgaataag tacgccgaat
     3781 tctttaagac ttgttcgtca aaagacggtt tggttgaaac tgtaccatgt cctaaggctc
     3841 ttggtgattt ggtggaatcg tgtgttggtg cgattcttct tgattcggga ttcaatttgg
     3901 atttagtttg gaagataatg atctcgtttt tggatcccgt catgaagttt tcagcattgc
     3961 agcttaatcc cataagagaa cttcaagaac tttgccagtt ttataattgg gaattgacgt
     4021 ttccatcggt taagaaagat aaaacgttta cggttgaagc aatcgttgac ggaaaagaag
     4081 tttgtgagag tgcttgtgct tccaatttta acaaaaaaac cgccaagaga attgcgtgtc
     4141 agaaattgta tttgtcattg aaggaaaaag gttacaaaac aaagatgaaa tctttggagg
     4201 aagttctgga agtcagccaa aagatggaag cgaaattaat cggatacgat gaaacaccaa
     4261 cagatgtagt tgtttcactt gccaaccaac ttaaagacgt taacgcaact gaacttagaa
     4321 gcgtttctcg aaaagcgcat gccggttctg aaaattctat acaaagttgt agcggtgtta
     4381 gacgtatggt gcagccgatg cctgaatgca gttcttcaaa tggcagtgct aatagcaatt
     4441 tacaagcacc agcaggttta agtgatgcgt tgcgtaaatc atcagcaaaa tcacatctgt
     4501 atgaaatatg tgctgtcaac tgttggaaac ccccattgtt tgaatgtttt gacgaaatag
     4561 gacccgcaca cctcaaacag tttgcattta gagtgagtat gacaatcgaa gaagcttcaa
     4621 atacagtttt ggagtgtatt ggagatcatc gagctaagaa gaaagatgct gctgagtttg
     4681 ccgctcatgg gttgatttgg tacttgaagc aaaatgggta tctacaaaag tagattttgg
     4741 agcttctttc ggtcacttta agtgtatatt atcagaatat gtagggatta ttgacacctt
     4801 gaactaatgg gcattagtac catagagccc tgtatcggag acataaaact tatacaccat
     4861 tattaaagtt gtatgcctaa tcatgacaca attatgtgtc tgacttagtt atcttccttc
     4921 ttacatatta gtggtctttt
//
LOCUS       XM_071829996             963 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-hook motif
            nuclear-localized protein 20-like (LOC139839830), mRNA.
ACCESSION   XM_071829996
VERSION     XM_071829996.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..963
                     /gene="LOC139839830"
                     /note="AT-hook motif nuclear-localized protein 20-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 49 Proteins"
                     /db_xref="GeneID:139839830"
     CDS             1..834
                     /gene="LOC139839830"
                     /codon_start=1
                     /product="AT-hook motif nuclear-localized protein 20-like"
                     /protein_id="XP_071686097.1"
                     /db_xref="GeneID:139839830"
                     /translation="MSNRWWTGQGNLAGVDPSSGGSLSLKKRDLGISMNENNTSEEDD
                     RDNNSDDPREGAIETSNRRPRGRPPGSKNKPKPPIIVTRDSPNALRSHVMEVESGTDI
                     AESIAHFSRKRQRGVCVMSASGTVMNVTLRQPTAPGSVMALQGRFEILSLTGAFLPGP
                     APPGSTGLTIYLAGGQGQVVGGSVVGSLVASGPVMVIAATFSNATYERLPVEDEEEGD
                     GVVQGGMGGGGGRGSPPGIAMVDQPMPPQGYNLQPNLMPNGGGQMNHEPFGWAHGRPS
                     Y"
     misc_feature    274..609
                     /gene="LOC139839830"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     Region: PCC; pfam03479"
                     /db_xref="CDD:460940"
ORIGIN      
        1 atgtcgaatc gatggtggac aggacaaggt aatctagccg gagttgaccc atcatcgggt
       61 ggttcgttga gtctaaagaa gcgagatcta ggcatatcga tgaacgagaa caacacaagt
      121 gaagaagatg atagagataa caacagcgat gatccaagag aaggtgcgat tgagacatca
      181 aacagacgac ctagaggccg tccacctgga tcgaaaaaca aacctaaacc cccgataatc
      241 gtaacaaggg acagccctaa cgcgcttcgt agccacgtta tggaagttga aagtggaact
      301 gatatagctg aaagtatagc tcattttagt agaaaaagac aaagaggggt ttgtgttatg
      361 agtgcaagtg ggacagttat gaatgtaact ttaagacaac caactgcacc tggatcagtt
      421 atggcgttac aaggacgatt cgagatttta tcgttaaccg gagctttttt acctggtcca
      481 gctccacctg ggtcaactgg gttgaccatt tatttagcag gaggtcaagg tcaagttgtg
      541 ggtgggagtg ttgtgggctc gttggttgca tcagggccag taatggtaat tgcagccaca
      601 ttttctaacg cgacatacga aagacttcct gttgaggatg aagaggaagg agatggtgtg
      661 gtgcagggtg ggatgggtgg gggtggtggc cgtggatctc cacctgggat cgcgatggta
      721 gatcagccaa tgccgccaca ggggtataat ttgcagccga atttgatgcc taatggtgga
      781 ggacaaatga accatgaacc atttggttgg gctcatggta ggccttcata ttaaaggtaa
      841 agttaagaag gattactact actattactt tactatgctg aatattttaa aactatattt
      901 aaacttaaat aaggtgtagt gtgatgttaa attaagtaag aatatataat ataatatatt
      961 ttg
//
LOCUS       XM_071829997            1626 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein Brevis radix-like 3
            (LOC139839831), mRNA.
ACCESSION   XM_071829997
VERSION     XM_071829997.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1626
                     /gene="LOC139839831"
                     /note="protein Brevis radix-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839831"
     CDS             424..1449
                     /gene="LOC139839831"
                     /codon_start=1
                     /product="protein Brevis radix-like 3"
                     /protein_id="XP_071686098.1"
                     /db_xref="GeneID:139839831"
                     /translation="MLTCIVCTKDLKGGSSLHDDQCDIGSTPSTKQAVKSLTSQASGT
                     YKNCKPCVGSTSSNPTRNVYYPDSESGSVSGRFFGGYQRAGAKVWGKEMEARLKGLSS
                     GATTPTSVSGRTESIVFMEEDEIKEWVAQVEPGVLITFLSLPQGGNDLKRIRFSREMF
                     NKWQAQRWWSENFEKIVELYNVQHFNQQGVPLPSPPTSEDESSKTESAENNPVTPPRT
                     PWNLYHPTGTEYSSSDSLDQQANHVSVPKLSNMSLAKTETSSVRSSSSYVETDQSGEL
                     SLSNAGDLENEWIEQDEPGVYITIRTLPDGTRELRRVRFSREKFEEKDAKMWWEQNKA
                     RIQQQYL"
     misc_feature    502..576
                     /gene="LOC139839831"
                     /note="Transcription factor BRX N-terminal domain; Region:
                     BRX_N; pfam13713"
                     /db_xref="CDD:404581"
     misc_feature    799..963
                     /gene="LOC139839831"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; Region: BRX; pfam08381"
                     /db_xref="CDD:429960"
     misc_feature    1276..1443
                     /gene="LOC139839831"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; Region: BRX; pfam08381"
                     /db_xref="CDD:429960"
ORIGIN      
        1 tgttggtatt tttgtagttc caatgcaaca ataaataggt acggtggtgt gtagtcactc
       61 tactagacta gatatcctac ttttcttttt ttacatcgtt atcgtataga tcaatcaccc
      121 actcacccac cggcacttct tgccgccggc atcttatcgt acaatacaaa caggcggcca
      181 cactcttgct atatcctata ctctctctct ctctctctct ctctctctct ctctctctct
      241 ctcttcgcat acgattacac ttgttccctc aaacgtggtt gcaaattcac cttttacaac
      301 tctttctgtc gactcttcta cacctatttt tacctatctt ttgccatttc atacatatca
      361 tcacgcccat tataaacttt gattgtttgg taacggtgat atttatcaag aatttatcca
      421 acgatgctga cgtgtattgt ttgcactaag gatcttaaag gtggatcatc tttacatgat
      481 gatcaatgtg atattggtag tacaccttca actaaacaag ctgttaaatc cctcacatcg
      541 caggcttcag ggacatataa gaactgcaag ccatgtgtcg gatcaaccag cagtaacccg
      601 acccgtaatg tttattatcc ggactctgaa agtggttcag tgtctggtag gttttttggt
      661 gggtaccaaa gagccggggc taaggtgtgg ggtaaggaaa tggaggcaag actaaagggg
      721 ctttcaagtg gtgctaccac tcccacatca gttagcggcc gaaccgaatc aattgtgttt
      781 atggaagagg atgaaatcaa agaatgggtt gctcaagtcg aacctggtgt tctcattaca
      841 tttctttcct tacctcaagg cggcaatgat ttaaaacgta ttcgtttcag tcgtgaaatg
      901 ttcaacaaat ggcaagctca aagatggtgg tctgagaatt ttgagaagat tgtggagttg
      961 tacaatgttc aacactttaa tcagcaagga gtaccacttc catctccacc aacatctgaa
     1021 gacgagagct caaaaaccga gtctgcagag aacaaccctg taactcctcc acgcacacct
     1081 tggaacttgt accacccaac cggaacggaa tactcgtcat cagattcact tgaccaacaa
     1141 gctaaccatg tttcagtacc taaactctct aacatgagct tagctaaaac tgaaacatca
     1201 tcagtaagaa gtagttcttc gtatgtagag actgatcagt ctggagagct ttcgttgagc
     1261 aatgcaggtg atttggaaaa tgaatggatt gagcaagacg agccaggagt atacattaca
     1321 atcagaacgt tgcctgatgg cacacgggag cttaggcgag tcagattcag tcgagaaaag
     1381 ttcgaagaaa aagatgctaa aatgtggtgg gaacagaata aagccagaat acaacaacag
     1441 tatttgtgag tttaaatatc gatctatcca tctatccaaa agcaagatgt tataatatct
     1501 atccatatat tgttatgcaa aactagtgta gcattttgca gttctatgtt aatcaaggca
     1561 tttgtagttt tttacatcct agctgtaaat cataaaatca ttagatcgtg tatttgatct
     1621 tctaat
//
LOCUS       XM_071829998            5767 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839832), transcript variant X1, mRNA.
ACCESSION   XM_071829998
VERSION     XM_071829998.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5767
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5767
                     /gene="LOC139839832"
                     /note="uncharacterized LOC139839832; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839832"
     CDS             395..5659
                     /gene="LOC139839832"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686099.1"
                     /db_xref="GeneID:139839832"
                     /translation="MDTVVYKALEEICSHGPTGLTLRNLWSKVNHHLTSNGIPLSSNV
                     KQALWSNLLNIPSIRFQCKGVLYDAENPNIQSVEDSESMDLKIVAAEHLLNNFVGIYD
                     ITASDAGISEPQRRILERLAIARTDGVAQSELAKELGIKSNYIYYSLKGLESRGLIVR
                     QSTIIRKKEAGNDEYKNGSIVNTNMLHLYRYAKHLGHLQRIEITKEDNTVTGNDDAER
                     GVATVDGVTEERIKDFVPAIRAICDRLEKADGKVLVISDIKKELGYTKTSGHRAWRNI
                     LHRMKDAHLVEDFVATVNNKEVNCLRLLKTFSPKTHGAEDDDLDPEQQVKMVKRGQIT
                     EQLMELPIEQQIYDMIDAEGSEGLILNEVYKRLGINNKRYYPRILDMVSRFGMHLDSE
                     SLNRGMVYRVWTSGNYDARGSKTTPGKEDIGKSSTHGQPGKQTPPHIIIPEDIDDWTS
                     KVDAESSEEQNIDDTQLDSTSLNNQQCETSDIIVVAEPQIVNAKPVSTFDPLELSSPA
                     SPAPRRRRSYKTYPCLGLSTTNSQREQRILEKLQEEKVLIRPELQRLLDSLENFETKH
                     MDRKTLERCLNKLQEDGHCKCISFAVPPVTNCGGKRTIDVILHPSVYEAKDLSDRVHD
                     KWRSFEKEMRRQSTSRYKSSKCKSIPVLNDVERIYTSTSKLIQAETAERMKNNGFVLA
                     KMVRAKLLHVFLWGYVTRLPGWDAGTVGFDQRNPHSSCKLLELDAAIKAMPLELFLQV
                     AGSSVKLESMVEKCRNGLCLSDLPINEYRSLMGTRATGLISCLIDILRRLKLIRLIAG
                     ETDVPVGPHATLRHSLELKPYIEEPVGIVFPSTSVNSFDIRPNVRHDFFLASRKDVHE
                     YWNTLEYCYAASDPKAALHAFPGSVVHEIFLSRSWASVRVMTAHQRAELFKHVASEGS
                     DKKISYRKCEKIAENLNLTLEQVLRVFYDKRQKDKMRVATSANKRKRSSEEKSVNNEN
                     FLALESGKLKRAKLFSVEDSTTEQNSLLEINNMLINEMDGQKVAVDDDDDMELIEDEN
                     SPSSILHECASSSRQSSNPKKFSWTANKDRQLVIEYVKHRATLGAKFHRIDWALLKSL
                     PGPPNACKRRMSNLNRNKQFRNTVMKICNLLSVRYAKHLQHSQNNSLDDNSRMIIEDH
                     NASALVDYTNVNTEERWDDFENEDIKMLLDEALKCKQTGLANATKGAQYISKYPQSDV
                     VGELHDLDENNMDSSTSPVTELKKDGASRQASVRRSRRPLPKSYAMLMNKVKDYGTNA
                     YKSLAVSNAMELFKLVFLSTAKAPEVPNLLAETLRRYSEHDLLTAFNYLRDRNFMVRG
                     NAISHFVLSQQFIHNISSSPFPVNTGKRAIKMNRWLHEREDDLLDSGVDLSADLQCGD
                     VLQLSVLMCWGEISVFPCLPDEGVGEVVDSKKRTFDDDDDNEDGISVEVAAKKQKSSD
                     SEIFSRKEKGFPGIQLSLSRSVVSKVDSFTLSGVDENARTSSSISLEQNSAAHSVHLA
                     NTDSSSESIWEAMTCYARHLESSSSREPSLLCPNLFKTIYSAVQKAGDQGLSMEGISD
                     VIDVQGEDIPELIVEVLEAFGRALKVNAYDCVHVVDPLYRSKYFLTSMGSHQHDSNAK
                     VPESCNNDGEPLELLQECHKDKDKNLAEETCTDLELYKSNDEVHHRVTILNHPEETSL
                     PVREVESNNEIETYTIEKIMPGPQETTTCESHVGDTLSCKPILPWVNGDGTVNDIVYK
                     GLVRRVLGIVMQNPGILEVRVCFYFFKI"
     misc_feature    725..973
                     /gene="LOC139839832"
                     /note="B-block binding subunit of TFIIIC; Region:
                     B-block_TFIIIC; pfam04182"
                     /db_xref="CDD:367858"
     misc_feature    1973..2248
                     /gene="LOC139839832"
                     /note="extended winged-helix domain of tau138 and related
                     proteins; Region: Tau138_eWH; cd16169"
                     /db_xref="CDD:320085"
ORIGIN      
        1 aagtatagta gtaataaagt tgaagggctc accaaccatc ttgaaatcct tttcaatttc
       61 acaggaccgt ctgtgcaact ggaaactcgt caagatttga atactgaaga agcaacaatg
      121 atcttaagat agcaaaattt ttattcttac tatatttttg gaagatctga taaatcaagt
      181 atctctttat tattgattga atcatccagg ctgtggttgt tgaattattg aatcataatt
      241 attttatcaa actcagccta aacctaaatc tcatctcaca agccaaccct ggaaaaaccc
      301 caattattat tattaatttt tttttatttt ctccaagtcc tgatctttct tcaattaaac
      361 ggttgcatgt tccatcttta atctccgacc accaatggac accgtcgtct acaaagcact
      421 cgaagaaata tgctcacatg gacctaccgg actaacactc cgtaacttat ggtccaaagt
      481 taaccaccat cttacctcta atggtattcc actctctagt aacgtcaaac aagccttatg
      541 gtcaaacctt ctcaatattc caagtatccg ttttcaatgt aaaggcgttc tctacgatgc
      601 tgaaaatcct aacattcaat ctgttgaaga ttccgagtcc atggatctga aaattgttgc
      661 agcagagcat ttgctgaaca attttgtagg tatttatgac attacagctt ccgatgctgg
      721 aatatcggag ccacagagac gtatacttga acgcctcgcc attgctagaa cagatggagt
      781 agctcaaagt gaacttgcta aggaacttgg tattaaaagc aactatatat attattcact
      841 aaagggtctt gaatcacgtg ggttaattgt gaggcaatcg actataataa ggaagaaaga
      901 agctggcaat gatgagtata aaaacggttc aatagtgaac accaatatgc tacacttgta
      961 tcgttatgca aagcatttgg gacacttaca gagaattgaa attaccaaag aggataacac
     1021 tgtcactggt aacgatgatg cagagagagg agttgctacc gttgatggtg ttactgaaga
     1081 gcgcataaaa gactttgtgc ctgctataag agctatttgt gatagattag aaaaagctga
     1141 tggcaaggtt cttgtcattt cagatattaa gaaggaatta ggttatacaa aaacctccgg
     1201 acatagagct tggagaaata tcttacacag gatgaaagat gcacacctag ttgaggattt
     1261 tgttgctacc gtgaacaaca aggaagttaa ctgcttacgg ctactaaaga cgttttctcc
     1321 taaaacacat ggagctgaag atgatgacct ggatccagaa caacaggtta aaatggtgaa
     1381 aagaggccaa atcactgaac agcttatgga gcttcctatt gagcagcaaa tatatgatat
     1441 gattgatgct gaaggttctg aaggcttgat tcttaatgag gtatataaaa ggcttggcat
     1501 aaacaataaa cggtactatc ctcgcattct tgatatggtg tctagatttg gaatgcatct
     1561 agattcagaa agcctaaata gaggcatggt ctaccgagtt tggacttctg ggaactatga
     1621 tgccaggggt agtaaaacaa cccctggtaa agaagatatt ggtaaatctt caactcatgg
     1681 tcaacctgga aaacagacgc cacctcacat tataattcca gaagatatag atgattggac
     1741 ctccaaagtt gatgctgaat ccagtgaaga acagaacatc gatgacacac aacttgattc
     1801 aacaagtttg aataatcagc aatgtgagac aagtgatata attgttgtcg cagaacctca
     1861 aattgtaaat gcaaagcctg tctcgacttt tgatcctttg gagttatctt cacctgcttc
     1921 accagcaccc cgacgtcgcc gctcatataa aacctatcca tgtcttggtc tgagtacaac
     1981 taactctcaa agggagcagc ggatacttga aaaattacag gaagagaagg tccttataag
     2041 acccgaatta caaaggctgc ttgatagtct tgagaatttt gaaactaaac atatggacag
     2101 gaaaacttta gagcgttgtt taaataagct tcaagaagat ggacactgca aatgcatttc
     2161 atttgctgtc cctcctgtta ctaactgtgg cggaaagcgt acaattgacg tgattctaca
     2221 tccctctgta tacgaagcca aagatctatc ggatcgggtt catgacaaat ggagatcatt
     2281 tgaaaaggaa atgcgtagac aaagtacttc tcgatataag agcagtaaat gtaaatcaat
     2341 tcccgtgtta aatgatgtgg agagaatata tacaagtaca agcaaactca ttcaagcaga
     2401 gacagccgaa agaatgaaaa acaatggttt tgtattggcg aaaatggtgc gtgcaaagct
     2461 gcttcatgtg tttttatggg gttatgtgac caggttacct ggctgggatg cgggaacagt
     2521 tggatttgat cagaggaacc cacacagttc atgcaaattg cttgaactag atgcagccat
     2581 caaggccatg ccacttgagt tgttcttgca ggttgcaggg tcctctgtaa aactcgagtc
     2641 tatggttgag aaatgcagga atggtttatg tctttcagac cttcccatta atgagtatag
     2701 gtctctcatg ggaactcgag caaccgggct aatctcatgt cttattgata tcttaagacg
     2761 cctgaagttg atacgattga ttgctggaga aactgatgtt cctgtgggcc cacatgctac
     2821 ccttaggcat tcattggaac ttaagcctta cattgaggaa cctgtgggaa tagtttttcc
     2881 atctactagt gtcaattcat ttgatattcg ccctaatgtc agacatgatt tttttcttgc
     2941 gagcagaaaa gatgttcatg aatattggaa cacacttgag tattgttatg ctgcttcaga
     3001 tcctaaagcg gctctgcatg ccttccctgg atctgttgtg catgagatat ttctttctcg
     3061 ttcatgggcc tcagtccgtg ttatgacagc tcatcagcgg gctgagctat tcaaacatgt
     3121 agcaagtgag ggctcagata aaaagatatc ctacagaaag tgtgagaaga ttgctgaaaa
     3181 tcttaatttg accttggaac aggttctccg tgttttctat gataagcgac aaaaggataa
     3241 aatgagggta gcaacaagtg caaataaaag gaaaaggtct tcagaagaaa aatctgtaaa
     3301 taatgaaaat tttctcgctt tagagtcggg caaattgaag cgtgccaaat tgttcagtgt
     3361 agaagattcc acaacagaac aaaattcatt acttgaaatt aacaatatgt tgatcaatga
     3421 aatggatggc cagaaagtgg ctgtagatga tgatgatgat atggaattaa ttgaagacga
     3481 gaacagtcct tcttctattt tacacgagtg tgcatcgtca tcgagacagt cttccaaccc
     3541 aaaaaagttt tcatggacag caaacaaaga taggcagttg gtaattgaat atgtaaaaca
     3601 ccgtgctact cttggagcaa agtttcaccg catagattgg gccttactta aaagtctacc
     3661 tggacctcct aatgcatgca aaaggagaat gtcaaatctg aacagaaaca aacagtttag
     3721 gaatactgta atgaaaatct gtaacttgct tagtgtgaga tatgcaaagc atcttcaaca
     3781 ttcccagaac aactcacttg atgataattc cagaatgatt attgaggatc ataatgcttc
     3841 tgcacttgtt gattacacaa atgtcaacac cgaagaacga tgggatgact ttgagaacga
     3901 agatataaag atgctcctcg atgaagctct taaatgcaag cagactggtt tagcaaatgc
     3961 cactaaaggt gctcaataca tatccaagta tcctcagtca gatgttgttg gtgaactaca
     4021 tgatttggat gaaaacaaca tggattcatc aactagcccc gtcaccgaat taaagaaaga
     4081 tggggccagt aggcaagcgt ctgtccgaag atcaaggcgt cctcttccca aaagctatgc
     4141 catgcttatg aataaagtaa aagattatgg tacgaatgct tataagtcat tagcagtttc
     4201 taatgccatg gagctattca agcttgtatt tctgagcacc gcaaaagctc cagaggttcc
     4261 aaacttgcta gctgaaacac tgcgtcgata ttcagagcac gatcttttga ctgcctttaa
     4321 ctacctcaga gacagaaatt tcatggtgag gggtaatgca attagtcact ttgtactctc
     4381 ccagcagttt atacataata tttcttcgtc tcctttccct gttaatactg gaaaaagagc
     4441 tattaagatg aataggtggc ttcatgagag agaagatgat ttgctggact cgggagtcga
     4501 tttatctgct gatttgcagt gtggagatgt tcttcaactg tccgtgctca tgtgttgggg
     4561 agaaatatcc gtttttcctt gtttgcctga tgaaggtgtt ggtgaagttg tggactcgaa
     4621 gaaacgtaca tttgacgacg acgacgacaa tgaagacggc attagtgttg aggtagctgc
     4681 taagaagcag aaatcatcgg acagtgaaat tttttctcgt aaagaaaaag ggttccctgg
     4741 tatccagctg tctttaagcc gcagtgtagt gtcaaaagtt gactcattta cattatctgg
     4801 agtcgacgag aatgcaagaa cttctagtag tatcagtttg gagcagaatt cagcagcgca
     4861 ttctgtacac ctggcaaata ctgactcctc ctctgagtca atatgggaag ctatgacttg
     4921 ctatgcaaga cacctggagt cttcttcttc acgtgaaccg tctctgttgt gtcccaatct
     4981 gtttaaaaca atctattcag ctgtccaaaa ggctggtgac caggggttaa gcatggaagg
     5041 aatctctgac gtcattgatg tgcagggcga agatattcca gaactcattg ttgaggtgct
     5101 tgaggcattt gggcgtgctt taaaggttaa cgcttatgat tgtgtccatg ttgttgaccc
     5161 tctatatcgg tcaaagtact ttttgacctc aatggggtcc caccaacatg atagtaatgc
     5221 aaaggtgcca gagagctgca ataatgatgg tgagccattg gagttgctgc aagaatgtca
     5281 taaagataaa gacaaaaatt tagcggaaga aacttgtaca gaccttgagc tgtataaaag
     5341 taacgatgag gtgcatcaca gagtaaccat cttaaaccat ccggaagaga cttctcttcc
     5401 tgtgagggaa gttgagagta acaatgagat tgaaacttac acaattgaga aaataatgcc
     5461 gggcccacag gagactacta cgtgtgaatc tcatgttggt gatactcttt cctgtaagcc
     5521 aatattgcct tgggtgaatg gagatggtac cgtgaatgat atagtttata aggggcttgt
     5581 acgccgtgtt ctaggtattg tgatgcaaaa tcctggaatt ttggaggtac gtgtatgttt
     5641 ttacttcttt aaaatatgat aaagatttgt aggtatgtaa agatatagat acgctagaca
     5701 tgtatatgtg tgaatctaag ctttttatta ttaatataga acctatttca aaacgagtag
     5761 ttatcta
//
LOCUS       XM_071829999            5173 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839832), transcript variant X2, mRNA.
ACCESSION   XM_071829999
VERSION     XM_071829999.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5173
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5173
                     /gene="LOC139839832"
                     /note="uncharacterized LOC139839832; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839832"
     CDS             107..5065
                     /gene="LOC139839832"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686100.1"
                     /db_xref="GeneID:139839832"
                     /translation="MTLQLPMLEYRSHRDVYLNASPLLDGVAQSELAKELGIKSNYIY
                     YSLKGLESRGLIVRQSTIIRKKEAGNDEYKNGSIVNTNMLHLYRYAKHLGHLQRIEIT
                     KEDNTVTGNDDAERGVATVDGVTEERIKDFVPAIRAICDRLEKADGKVLVISDIKKEL
                     GYTKTSGHRAWRNILHRMKDAHLVEDFVATVNNKEVNCLRLLKTFSPKTHGAEDDDLD
                     PEQQVKMVKRGQITEQLMELPIEQQIYDMIDAEGSEGLILNEVYKRLGINNKRYYPRI
                     LDMVSRFGMHLDSESLNRGMVYRVWTSGNYDARGSKTTPGKEDIGKSSTHGQPGKQTP
                     PHIIIPEDIDDWTSKVDAESSEEQNIDDTQLDSTSLNNQQCETSDIIVVAEPQIVNAK
                     PVSTFDPLELSSPASPAPRRRRSYKTYPCLGLSTTNSQREQRILEKLQEEKVLIRPEL
                     QRLLDSLENFETKHMDRKTLERCLNKLQEDGHCKCISFAVPPVTNCGGKRTIDVILHP
                     SVYEAKDLSDRVHDKWRSFEKEMRRQSTSRYKSSKCKSIPVLNDVERIYTSTSKLIQA
                     ETAERMKNNGFVLAKMVRAKLLHVFLWGYVTRLPGWDAGTVGFDQRNPHSSCKLLELD
                     AAIKAMPLELFLQVAGSSVKLESMVEKCRNGLCLSDLPINEYRSLMGTRATGLISCLI
                     DILRRLKLIRLIAGETDVPVGPHATLRHSLELKPYIEEPVGIVFPSTSVNSFDIRPNV
                     RHDFFLASRKDVHEYWNTLEYCYAASDPKAALHAFPGSVVHEIFLSRSWASVRVMTAH
                     QRAELFKHVASEGSDKKISYRKCEKIAENLNLTLEQVLRVFYDKRQKDKMRVATSANK
                     RKRSSEEKSVNNENFLALESGKLKRAKLFSVEDSTTEQNSLLEINNMLINEMDGQKVA
                     VDDDDDMELIEDENSPSSILHECASSSRQSSNPKKFSWTANKDRQLVIEYVKHRATLG
                     AKFHRIDWALLKSLPGPPNACKRRMSNLNRNKQFRNTVMKICNLLSVRYAKHLQHSQN
                     NSLDDNSRMIIEDHNASALVDYTNVNTEERWDDFENEDIKMLLDEALKCKQTGLANAT
                     KGAQYISKYPQSDVVGELHDLDENNMDSSTSPVTELKKDGASRQASVRRSRRPLPKSY
                     AMLMNKVKDYGTNAYKSLAVSNAMELFKLVFLSTAKAPEVPNLLAETLRRYSEHDLLT
                     AFNYLRDRNFMVRGNAISHFVLSQQFIHNISSSPFPVNTGKRAIKMNRWLHEREDDLL
                     DSGVDLSADLQCGDVLQLSVLMCWGEISVFPCLPDEGVGEVVDSKKRTFDDDDDNEDG
                     ISVEVAAKKQKSSDSEIFSRKEKGFPGIQLSLSRSVVSKVDSFTLSGVDENARTSSSI
                     SLEQNSAAHSVHLANTDSSSESIWEAMTCYARHLESSSSREPSLLCPNLFKTIYSAVQ
                     KAGDQGLSMEGISDVIDVQGEDIPELIVEVLEAFGRALKVNAYDCVHVVDPLYRSKYF
                     LTSMGSHQHDSNAKVPESCNNDGEPLELLQECHKDKDKNLAEETCTDLELYKSNDEVH
                     HRVTILNHPEETSLPVREVESNNEIETYTIEKIMPGPQETTTCESHVGDTLSCKPILP
                     WVNGDGTVNDIVYKGLVRRVLGIVMQNPGILEVRVCFYFFKI"
     misc_feature    <179..379
                     /gene="LOC139839832"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; Region: HTH_ARSR;
                     cl46857"
                     /db_xref="CDD:481197"
     misc_feature    1379..1654
                     /gene="LOC139839832"
                     /note="extended winged-helix domain of tau138 and related
                     proteins; Region: Tau138_eWH; cd16169"
                     /db_xref="CDD:320085"
ORIGIN      
        1 ctctacgatg ctgaaaatcc taacattcaa tctgttgaag attccgagtc catggatctg
       61 aaaattgttg cagcagagca tttgctgaac aattttgtag gtatttatga cattacagct
      121 tccgatgctg gaatatcgga gccacagaga cgtatacttg aacgcctcgc cattgctaga
      181 tggagtagct caaagtgaac ttgctaagga acttggtatt aaaagcaact atatatatta
      241 ttcactaaag ggtcttgaat cacgtgggtt aattgtgagg caatcgacta taataaggaa
      301 gaaagaagct ggcaatgatg agtataaaaa cggttcaata gtgaacacca atatgctaca
      361 cttgtatcgt tatgcaaagc atttgggaca cttacagaga attgaaatta ccaaagagga
      421 taacactgtc actggtaacg atgatgcaga gagaggagtt gctaccgttg atggtgttac
      481 tgaagagcgc ataaaagact ttgtgcctgc tataagagct atttgtgata gattagaaaa
      541 agctgatggc aaggttcttg tcatttcaga tattaagaag gaattaggtt atacaaaaac
      601 ctccggacat agagcttgga gaaatatctt acacaggatg aaagatgcac acctagttga
      661 ggattttgtt gctaccgtga acaacaagga agttaactgc ttacggctac taaagacgtt
      721 ttctcctaaa acacatggag ctgaagatga tgacctggat ccagaacaac aggttaaaat
      781 ggtgaaaaga ggccaaatca ctgaacagct tatggagctt cctattgagc agcaaatata
      841 tgatatgatt gatgctgaag gttctgaagg cttgattctt aatgaggtat ataaaaggct
      901 tggcataaac aataaacggt actatcctcg cattcttgat atggtgtcta gatttggaat
      961 gcatctagat tcagaaagcc taaatagagg catggtctac cgagtttgga cttctgggaa
     1021 ctatgatgcc aggggtagta aaacaacccc tggtaaagaa gatattggta aatcttcaac
     1081 tcatggtcaa cctggaaaac agacgccacc tcacattata attccagaag atatagatga
     1141 ttggacctcc aaagttgatg ctgaatccag tgaagaacag aacatcgatg acacacaact
     1201 tgattcaaca agtttgaata atcagcaatg tgagacaagt gatataattg ttgtcgcaga
     1261 acctcaaatt gtaaatgcaa agcctgtctc gacttttgat cctttggagt tatcttcacc
     1321 tgcttcacca gcaccccgac gtcgccgctc atataaaacc tatccatgtc ttggtctgag
     1381 tacaactaac tctcaaaggg agcagcggat acttgaaaaa ttacaggaag agaaggtcct
     1441 tataagaccc gaattacaaa ggctgcttga tagtcttgag aattttgaaa ctaaacatat
     1501 ggacaggaaa actttagagc gttgtttaaa taagcttcaa gaagatggac actgcaaatg
     1561 catttcattt gctgtccctc ctgttactaa ctgtggcgga aagcgtacaa ttgacgtgat
     1621 tctacatccc tctgtatacg aagccaaaga tctatcggat cgggttcatg acaaatggag
     1681 atcatttgaa aaggaaatgc gtagacaaag tacttctcga tataagagca gtaaatgtaa
     1741 atcaattccc gtgttaaatg atgtggagag aatatataca agtacaagca aactcattca
     1801 agcagagaca gccgaaagaa tgaaaaacaa tggttttgta ttggcgaaaa tggtgcgtgc
     1861 aaagctgctt catgtgtttt tatggggtta tgtgaccagg ttacctggct gggatgcggg
     1921 aacagttgga tttgatcaga ggaacccaca cagttcatgc aaattgcttg aactagatgc
     1981 agccatcaag gccatgccac ttgagttgtt cttgcaggtt gcagggtcct ctgtaaaact
     2041 cgagtctatg gttgagaaat gcaggaatgg tttatgtctt tcagaccttc ccattaatga
     2101 gtataggtct ctcatgggaa ctcgagcaac cgggctaatc tcatgtctta ttgatatctt
     2161 aagacgcctg aagttgatac gattgattgc tggagaaact gatgttcctg tgggcccaca
     2221 tgctaccctt aggcattcat tggaacttaa gccttacatt gaggaacctg tgggaatagt
     2281 ttttccatct actagtgtca attcatttga tattcgccct aatgtcagac atgatttttt
     2341 tcttgcgagc agaaaagatg ttcatgaata ttggaacaca cttgagtatt gttatgctgc
     2401 ttcagatcct aaagcggctc tgcatgcctt ccctggatct gttgtgcatg agatatttct
     2461 ttctcgttca tgggcctcag tccgtgttat gacagctcat cagcgggctg agctattcaa
     2521 acatgtagca agtgagggct cagataaaaa gatatcctac agaaagtgtg agaagattgc
     2581 tgaaaatctt aatttgacct tggaacaggt tctccgtgtt ttctatgata agcgacaaaa
     2641 ggataaaatg agggtagcaa caagtgcaaa taaaaggaaa aggtcttcag aagaaaaatc
     2701 tgtaaataat gaaaattttc tcgctttaga gtcgggcaaa ttgaagcgtg ccaaattgtt
     2761 cagtgtagaa gattccacaa cagaacaaaa ttcattactt gaaattaaca atatgttgat
     2821 caatgaaatg gatggccaga aagtggctgt agatgatgat gatgatatgg aattaattga
     2881 agacgagaac agtccttctt ctattttaca cgagtgtgca tcgtcatcga gacagtcttc
     2941 caacccaaaa aagttttcat ggacagcaaa caaagatagg cagttggtaa ttgaatatgt
     3001 aaaacaccgt gctactcttg gagcaaagtt tcaccgcata gattgggcct tacttaaaag
     3061 tctacctgga cctcctaatg catgcaaaag gagaatgtca aatctgaaca gaaacaaaca
     3121 gtttaggaat actgtaatga aaatctgtaa cttgcttagt gtgagatatg caaagcatct
     3181 tcaacattcc cagaacaact cacttgatga taattccaga atgattattg aggatcataa
     3241 tgcttctgca cttgttgatt acacaaatgt caacaccgaa gaacgatggg atgactttga
     3301 gaacgaagat ataaagatgc tcctcgatga agctcttaaa tgcaagcaga ctggtttagc
     3361 aaatgccact aaaggtgctc aatacatatc caagtatcct cagtcagatg ttgttggtga
     3421 actacatgat ttggatgaaa acaacatgga ttcatcaact agccccgtca ccgaattaaa
     3481 gaaagatggg gccagtaggc aagcgtctgt ccgaagatca aggcgtcctc ttcccaaaag
     3541 ctatgccatg cttatgaata aagtaaaaga ttatggtacg aatgcttata agtcattagc
     3601 agtttctaat gccatggagc tattcaagct tgtatttctg agcaccgcaa aagctccaga
     3661 ggttccaaac ttgctagctg aaacactgcg tcgatattca gagcacgatc ttttgactgc
     3721 ctttaactac ctcagagaca gaaatttcat ggtgaggggt aatgcaatta gtcactttgt
     3781 actctcccag cagtttatac ataatatttc ttcgtctcct ttccctgtta atactggaaa
     3841 aagagctatt aagatgaata ggtggcttca tgagagagaa gatgatttgc tggactcggg
     3901 agtcgattta tctgctgatt tgcagtgtgg agatgttctt caactgtccg tgctcatgtg
     3961 ttggggagaa atatccgttt ttccttgttt gcctgatgaa ggtgttggtg aagttgtgga
     4021 ctcgaagaaa cgtacatttg acgacgacga cgacaatgaa gacggcatta gtgttgaggt
     4081 agctgctaag aagcagaaat catcggacag tgaaattttt tctcgtaaag aaaaagggtt
     4141 ccctggtatc cagctgtctt taagccgcag tgtagtgtca aaagttgact catttacatt
     4201 atctggagtc gacgagaatg caagaacttc tagtagtatc agtttggagc agaattcagc
     4261 agcgcattct gtacacctgg caaatactga ctcctcctct gagtcaatat gggaagctat
     4321 gacttgctat gcaagacacc tggagtcttc ttcttcacgt gaaccgtctc tgttgtgtcc
     4381 caatctgttt aaaacaatct attcagctgt ccaaaaggct ggtgaccagg ggttaagcat
     4441 ggaaggaatc tctgacgtca ttgatgtgca gggcgaagat attccagaac tcattgttga
     4501 ggtgcttgag gcatttgggc gtgctttaaa ggttaacgct tatgattgtg tccatgttgt
     4561 tgaccctcta tatcggtcaa agtacttttt gacctcaatg gggtcccacc aacatgatag
     4621 taatgcaaag gtgccagaga gctgcaataa tgatggtgag ccattggagt tgctgcaaga
     4681 atgtcataaa gataaagaca aaaatttagc ggaagaaact tgtacagacc ttgagctgta
     4741 taaaagtaac gatgaggtgc atcacagagt aaccatctta aaccatccgg aagagacttc
     4801 tcttcctgtg agggaagttg agagtaacaa tgagattgaa acttacacaa ttgagaaaat
     4861 aatgccgggc ccacaggaga ctactacgtg tgaatctcat gttggtgata ctctttcctg
     4921 taagccaata ttgccttggg tgaatggaga tggtaccgtg aatgatatag tttataaggg
     4981 gcttgtacgc cgtgttctag gtattgtgat gcaaaatcct ggaattttgg aggtacgtgt
     5041 atgtttttac ttctttaaaa tatgataaag atttgtaggt atgtaaagat atagatacgc
     5101 tagacatgta tatgtgtgaa tctaagcttt ttattattaa tatagaacct atttcaaaac
     5161 gagtagttat cta
//
LOCUS       XM_071830000            3052 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839832), transcript variant X3, mRNA.
ACCESSION   XM_071830000
VERSION     XM_071830000.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3052
                     /gene="LOC139839832"
                     /note="uncharacterized LOC139839832; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139839832"
     CDS             395..3052
                     /gene="LOC139839832"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071686101.1"
                     /db_xref="GeneID:139839832"
                     /translation="MDTVVYKALEEICSHGPTGLTLRNLWSKVNHHLTSNGIPLSSNV
                     KQALWSNLLNIPSIRFQCKGVLYDAENPNIQSVEDSESMDLKIVAAEHLLNNFVGIYD
                     ITASDAGISEPQRRILERLAIARTDGVAQSELAKELGIKSNYIYYSLKGLESRGLIVR
                     QSTIIRKKEAGNDEYKNGSIVNTNMLHLYRYAKHLGHLQRIEITKEDNTVTGNDDAER
                     GVATVDGVTEERIKDFVPAIRAICDRLEKADGKVLVISDIKKELGYTKTSGHRAWRNI
                     LHRMKDAHLVEDFVATVNNKEVNCLRLLKTFSPKTHGAEDDDLDPEQQVKMVKRGQIT
                     EQLMELPIEQQIYDMIDAEGSEGLILNEVYKRLGINNKRYYPRILDMVSRFGMHLDSE
                     SLNRGMVYRVWTSGNYDARGSKTTPGKEDIGKSSTHGQPGKQTPPHIIIPEDIDDWTS
                     KVDAESSEEQNIDDTQLDSTSLNNQQCETSDIIVVAEPQIVNAKPVSTFDPLELSSPA
                     SPAPRRRRSYKTYPCLGLSTTNSQREQRILEKLQEEKVLIRPELQRLLDSLENFETKH
                     MDRKTLERCLNKLQEDGHCKCISFAVPPVTNCGGKRTIDVILHPSVYEAKDLSDRVHD
                     KWRSFEKEMRRQSTSRYKSSKCKSIPVLNDVERIYTSTSKLIQAETAERMKNNGFVLA
                     KMVRAKLLHVFLWGYVTRLPGWDAGTVGFDQRNPHSSCKLLELDAAIKAMPLELFLQV
                     AGSSVKLESMVEKCRNGLCLSDLPINEYRSLMGTRATGLISCLIDILRRLKLIRLIAG
                     ETDVPVGPHATLRHSLELKPYIEEPVGIVFPSTSVNSFDIRPNVRHDFFLASRKDVHE
                     YWNTLEYCYAASDPKAALHAFPGSVVHEV"
     misc_feature    725..973
                     /gene="LOC139839832"
                     /note="B-block binding subunit of TFIIIC; Region:
                     B-block_TFIIIC; pfam04182"
                     /db_xref="CDD:367858"
     misc_feature    1973..2248
                     /gene="LOC139839832"
                     /note="extended winged-helix domain of tau138 and related
                     proteins; Region: Tau138_eWH; cd16169"
                     /db_xref="CDD:320085"
ORIGIN      
        1 aagtatagta gtaataaagt tgaagggctc accaaccatc ttgaaatcct tttcaatttc
       61 acaggaccgt ctgtgcaact ggaaactcgt caagatttga atactgaaga agcaacaatg
      121 atcttaagat agcaaaattt ttattcttac tatatttttg gaagatctga taaatcaagt
      181 atctctttat tattgattga atcatccagg ctgtggttgt tgaattattg aatcataatt
      241 attttatcaa actcagccta aacctaaatc tcatctcaca agccaaccct ggaaaaaccc
      301 caattattat tattaatttt tttttatttt ctccaagtcc tgatctttct tcaattaaac
      361 ggttgcatgt tccatcttta atctccgacc accaatggac accgtcgtct acaaagcact
      421 cgaagaaata tgctcacatg gacctaccgg actaacactc cgtaacttat ggtccaaagt
      481 taaccaccat cttacctcta atggtattcc actctctagt aacgtcaaac aagccttatg
      541 gtcaaacctt ctcaatattc caagtatccg ttttcaatgt aaaggcgttc tctacgatgc
      601 tgaaaatcct aacattcaat ctgttgaaga ttccgagtcc atggatctga aaattgttgc
      661 agcagagcat ttgctgaaca attttgtagg tatttatgac attacagctt ccgatgctgg
      721 aatatcggag ccacagagac gtatacttga acgcctcgcc attgctagaa cagatggagt
      781 agctcaaagt gaacttgcta aggaacttgg tattaaaagc aactatatat attattcact
      841 aaagggtctt gaatcacgtg ggttaattgt gaggcaatcg actataataa ggaagaaaga
      901 agctggcaat gatgagtata aaaacggttc aatagtgaac accaatatgc tacacttgta
      961 tcgttatgca aagcatttgg gacacttaca gagaattgaa attaccaaag aggataacac
     1021 tgtcactggt aacgatgatg cagagagagg agttgctacc gttgatggtg ttactgaaga
     1081 gcgcataaaa gactttgtgc ctgctataag agctatttgt gatagattag aaaaagctga
     1141 tggcaaggtt cttgtcattt cagatattaa gaaggaatta ggttatacaa aaacctccgg
     1201 acatagagct tggagaaata tcttacacag gatgaaagat gcacacctag ttgaggattt
     1261 tgttgctacc gtgaacaaca aggaagttaa ctgcttacgg ctactaaaga cgttttctcc
     1321 taaaacacat ggagctgaag atgatgacct ggatccagaa caacaggtta aaatggtgaa
     1381 aagaggccaa atcactgaac agcttatgga gcttcctatt gagcagcaaa tatatgatat
     1441 gattgatgct gaaggttctg aaggcttgat tcttaatgag gtatataaaa ggcttggcat
     1501 aaacaataaa cggtactatc ctcgcattct tgatatggtg tctagatttg gaatgcatct
     1561 agattcagaa agcctaaata gaggcatggt ctaccgagtt tggacttctg ggaactatga
     1621 tgccaggggt agtaaaacaa cccctggtaa agaagatatt ggtaaatctt caactcatgg
     1681 tcaacctgga aaacagacgc cacctcacat tataattcca gaagatatag atgattggac
     1741 ctccaaagtt gatgctgaat ccagtgaaga acagaacatc gatgacacac aacttgattc
     1801 aacaagtttg aataatcagc aatgtgagac aagtgatata attgttgtcg cagaacctca
     1861 aattgtaaat gcaaagcctg tctcgacttt tgatcctttg gagttatctt cacctgcttc
     1921 accagcaccc cgacgtcgcc gctcatataa aacctatcca tgtcttggtc tgagtacaac
     1981 taactctcaa agggagcagc ggatacttga aaaattacag gaagagaagg tccttataag
     2041 acccgaatta caaaggctgc ttgatagtct tgagaatttt gaaactaaac atatggacag
     2101 gaaaacttta gagcgttgtt taaataagct tcaagaagat ggacactgca aatgcatttc
     2161 atttgctgtc cctcctgtta ctaactgtgg cggaaagcgt acaattgacg tgattctaca
     2221 tccctctgta tacgaagcca aagatctatc ggatcgggtt catgacaaat ggagatcatt
     2281 tgaaaaggaa atgcgtagac aaagtacttc tcgatataag agcagtaaat gtaaatcaat
     2341 tcccgtgtta aatgatgtgg agagaatata tacaagtaca agcaaactca ttcaagcaga
     2401 gacagccgaa agaatgaaaa acaatggttt tgtattggcg aaaatggtgc gtgcaaagct
     2461 gcttcatgtg tttttatggg gttatgtgac caggttacct ggctgggatg cgggaacagt
     2521 tggatttgat cagaggaacc cacacagttc atgcaaattg cttgaactag atgcagccat
     2581 caaggccatg ccacttgagt tgttcttgca ggttgcaggg tcctctgtaa aactcgagtc
     2641 tatggttgag aaatgcagga atggtttatg tctttcagac cttcccatta atgagtatag
     2701 gtctctcatg ggaactcgag caaccgggct aatctcatgt cttattgata tcttaagacg
     2761 cctgaagttg atacgattga ttgctggaga aactgatgtt cctgtgggcc cacatgctac
     2821 ccttaggcat tcattggaac ttaagcctta cattgaggaa cctgtgggaa tagtttttcc
     2881 atctactagt gtcaattcat ttgatattcg ccctaatgtc agacatgatt tttttcttgc
     2941 gagcagaaaa gatgttcatg aatattggaa cacacttgag tattgttatg ctgcttcaga
     3001 tcctaaagcg gctctgcatg ccttccctgg atctgttgtg catgaggttt ag
//
LOCUS       XM_071830001            3289 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cell division cycle 5-like
            protein (LOC139839834), mRNA.
ACCESSION   XM_071830001
VERSION     XM_071830001.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3289
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3289
                     /gene="LOC139839834"
                     /note="cell division cycle 5-like protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839834"
     CDS             178..2913
                     /gene="LOC139839834"
                     /codon_start=1
                     /product="cell division cycle 5-like protein"
                     /protein_id="XP_071686102.1"
                     /db_xref="GeneID:139839834"
                     /translation="MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQ
                     CKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKL
                     LDAACAKDESYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLAN
                     TRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDNRNRKRKRKGIDYNAEIPFEKR
                     PPPGFYDVADENSIVVQPSFPTTIEDLEGERRADKEARLRKQDIARNKIAQRQDAPSA
                     ILQANKMNDPETVRKRPKMNLPTPQIPDYELEHIAKISLPALSEELSEGSNATRALLA
                     DYTQTPHQGMTPLRTPQRTPAGKQDAIMMEAENQARLRLSQTPLLGGDNPDLHPSDFS
                     GVTPKKKDVQTPNPMLTPSAMSTPGPMGLGSTPRLGLTPRDGQSFGLTPKGTPIRDDL
                     RINEELEMHDSGKLELRRQADTRRNLRSGLTGLPQPKNEYQIVVQPVPEDNEEMEEKM
                     EEDMSDKIAREKAEEEAKLQALLKKRSKVLQRELPRPPVDSVDLIRKSLIRGDEDKSS
                     FVPPTLIEQADEMIRKELLCLLEHDNAKYPIDEKVEKEKKRGNKRSGGKSVSVPVIDE
                     FDEDELKEADQMIKEESQLLRVAMGHEEDDIDEFVEAHRTCLNDIMYFPTRNTYGLSS
                     VAGNSEKLAAFQDEFDNVKKRMDDDTRKAQRLEQKVKVLTNGYQMRAATIWSQVEATF
                     KQMDTAGTEYECFLALQRQEQSAASNRINSIWKDVQKQKELEKTLQNRYGDLLAVQER
                     VHNLMEKYRQEAKRQEEIAQAEVAAMAAENREDTNMAEPEEQAPEQVKEAIQTVELPE
                     QVKDVASQAVDSKMEDESSIEQSETDADHSVVVDVPESKSVVETNEPVISEANEE"
     misc_feature    178..>864
                     /gene="LOC139839834"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; Region: REB1; COG5147"
                     /db_xref="CDD:227476"
     misc_feature    1384..2145
                     /gene="LOC139839834"
                     /note="pre-mRNA splicing factor component; Region:
                     Myb_Cef; pfam11831"
                     /db_xref="CDD:463366"
     polyA_site      3289
                     /gene="LOC139839834"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatacccaaa tttaaaccga ttatcggcgt ctacgtttca agagaaacca ttgaaatcga
       61 aactcatcga tacagatcca catatatcaa ttagggtttc tccgtcaaat tactgccttt
      121 tgaaccaaaa cctgcaactg caacaacaaa ttgttgtgca caatctaaac agcgaagatg
      181 aggattatga taaagggcgg tgtttggaag aacaccgaag atgaaatcct aaaagccgct
      241 gttatgaaat acgggaagaa tcaatgggct cgtatttcat cactgcttgt tcgtaaatcg
      301 gccaaacaat gtaaagctcg gtggtatgag tggctggatc cctcaattaa aaaaactgag
      361 tggaccagag aagaagatga aaagctgctt catttggcta agcttatgcc cactcaatgg
      421 agaacaatcg ctccaatcgt aggtcgcaca ccatcccagt gtctcgagcg atatgaaaaa
      481 ctgctcgatg cagcttgtgc gaaggatgaa agttatgaac ccggggacga tcccagaaaa
      541 ttgcgtccgg gggagatcga cccaaaccca gaatcaaaac ccgcacgacc cgacccggtt
      601 gatatggatg aagatgaaaa agaaatgctt tcagaagctc gggcccgttt agctaatact
      661 aggggcaaaa aggccaaacg aaaagcccgg gaaaagcaac ttgaagaggc tcgaaggctt
      721 gcttctttgc aaaaaaggcg agaacttaaa gcagctggaa ttgataatag aaatagaaaa
      781 aggaagcgaa aggggatcga ttacaacgct gaaataccgt ttgaaaaaag gcccccacct
      841 ggtttttatg atgtggcaga tgaaaattca atagttgtac aaccgagttt tccgaccact
      901 attgaggatc ttgaaggtga aagacgggct gataaggagg cccgtttgag aaaacaagat
      961 attgctagga acaagattgc acagagacaa gatgccccgt cagctatatt acaagcaaac
     1021 aagatgaacg atcccgaaac tgtcagaaaa aggccaaaaa tgaacctccc gactccacaa
     1081 attcccgatt atgaactaga acatattgca aaaattagcc ttcctgcttt aagtgaagaa
     1141 ctttctgaag gaagtaatgc cacacgtgca ctcttagctg attataccca aacgccacat
     1201 caaggaatga ccccactgag gaccccacag agaacgccag ctggcaagca agatgctata
     1261 atgatggagg ctgaaaatca agcccgatta agattatctc agactccatt actcggtggt
     1321 gataatcccg atttacatcc ttcagatttt tcaggggtca caccgaagaa aaaggacgtt
     1381 caaaccccga acccgatgct aacaccttcg gctatgtcaa ctcccggacc catgggtctg
     1441 ggttcgacac ctaggctcgg gttgaccccg agagatggtc aatcttttgg tttgactccg
     1501 aaagggaccc cgatacgtga cgatcttcgt atcaatgaag aattggaaat gcacgatagt
     1561 ggtaaactcg agcttcgtag gcaagcggat acgagacgaa atttgcgttc gggtttgact
     1621 ggtcttcctc aaccgaaaaa cgagtatcag attgttgttc aaccagttcc agaagataat
     1681 gaagaaatgg aggagaaaat ggaagaggat atgtctgata agatagcccg ggaaaaagct
     1741 gaggaagaag ctaagttgca ggcgttactt aagaaaaggt cgaaagtgtt gcaacgcgag
     1801 ctcccgagac cacctgttga ctcggttgac ttgataagga agtctttaat aagaggtgat
     1861 gaagataaga gttcgtttgt tccgcctacg ttgattgaac aggcggatga aatgataagg
     1921 aaggagcttt tgtgtttatt ggagcatgat aatgctaagt atccgattga tgaaaaggta
     1981 gagaaggaga aaaagagagg aaacaagcgt tcgggtggga aatctgtttc ggttcctgtt
     2041 atagatgaat ttgatgaaga tgaactgaaa gaggctgatc aaatgattaa ggaagagtca
     2101 caacttttgc gtgttgcgat gggccatgag gaggatgata ttgatgaatt tgttgaagca
     2161 caccggacat gcttaaatga catcatgtat ttcccgaccc gcaatacgta cggtctctct
     2221 agtgttgctg gaaactcaga aaagcttgct gcttttcaag atgagtttga caatgttaag
     2281 aagagaatgg atgatgatac taggaaggca caacgcctcg agcaaaaagt caaggttctt
     2341 accaatggct atcagatgcg agctgcaact atctggtcac aagtagaggc aaccttcaaa
     2401 cagatggata ccgctggaac agagtatgag tgcttcctag cattacaaag acaagagcag
     2461 tcggcagcat ccaatcgtat taatagcata tggaaagacg tgcaaaagca aaaagaatta
     2521 gagaaaactc tacaaaatcg atacggtgat ctgcttgcag tgcaagaaag ggtccacaat
     2581 cttatggaga agtacagaca agaggctaaa agacaagaag agattgctca ggctgaggtg
     2641 gcggcgatgg ctgcagaaaa ccgagaagat acaaatatgg ccgaacccga ggaacaggct
     2701 cctgagcagg ttaaggaagc aattcagacg gttgaattac ctgagcaggt taaggatgtt
     2761 gcaagtcagg cggttgactc aaaaatggag gatgaatcct ctattgaaca atctgaaaca
     2821 gacgctgacc attctgttgt ggttgatgtc cctgaaagca aaagtgtggt tgaaactaat
     2881 gagcctgtta tttcagaggc aaatgaggaa taaatgtcca tcgagctaag tgggtaactg
     2941 atcttgctta tttgtttcga aaaagagaag gaaaaaaacg aatatgaatt gtgcatttct
     3001 ttgcctgatt aactgaatgc aagatttcct tgacgcaacc tgggatgtac cgtggccaca
     3061 acgagatctg cttgtacgtt ttttaaatta ttgtcctgta ctaatgtact tttgagaatg
     3121 tatcataatc atatacttta tttcagtaga ggatgctata tttggtgaaa ttgaactttt
     3181 ggctttgaat gctttgagac ctgcattgac cgatgttgaa ttttaccaat aatttgtggt
     3241 tttatacatt ttcctagata tatcatataa gaccaataaa ttgatttga
//
LOCUS       XM_071830003            2736 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839835), transcript variant X1, mRNA.
ACCESSION   XM_071830003
VERSION     XM_071830003.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2736
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2736
                     /gene="LOC139839835"
                     /note="uncharacterized LOC139839835; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839835"
     CDS             134..2542
                     /gene="LOC139839835"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686104.1"
                     /db_xref="GeneID:139839835"
                     /translation="MSYVEEKKCPLCAEEMDWTDQQLNPCKCGYEVCVWCWHHIMDMA
                     EKDATEGRCPACRTPYDKDRIVGLETNFQRVSSNSSSRKQKLQKAKSKPNEGRKDLSN
                     VRVIQRKMAYIIGLPLDLADEDLLQRKSYFGQYGKIMKVSLSRTSGGALQQLINDTCS
                     VYITYSKEDEAVTCIQSVHGYVLDGRLLRASFGTAKYCHAWLRNTSCDNPACLYLHTL
                     GAEEDSFGKDEVAAVHTRNRVQEIVGATQYLQRRAGTMLPPPVIGRSNNHSASAEDPV
                     FDSGLKVRDYNHDEAYGTVASGGHLSVKSSKQMTSFVDIVGQSSSSSSDKDVNSRDED
                     QRLNDETEIPDSVIVKSSTPNQLADSPTYDDQRLKGSVGSGHTVSCFPSYPADTTKEC
                     SDISLGHNRYHNHNHIGSYTNEEDTVRSPYMNSVFSDGFQSSAKSDRIYRGSNSFSNE
                     EIVERLRRIDDDTLVDNDNDENFASFEDNIISNILSLDLDGDNSDYPRTVARDGRNSS
                     AWNIQNNGQSSFSYAKEHEFSGQRNDLVSPSNIGQGLTFSGLQNSSDNKNSFFTSQHQ
                     VAPRTQNMTPPGFTMISKPPPGFSTSTRTDQNVSANSGNYYRAAPNNLYRSPSFGNLS
                     NSSDDLVGGVKPATNGLLTSSWTSSFPSRCSIDDNSKQWLFTQQQSGPVTAPHHHHHH
                     ETQLSQPTMQQYHHTTPQFPSSQGKLYGGISSGVVDPHHQSYNPSSYNQQPPKFAGGY
                     QQHNINHLPFSQQHDNRSEVGRFGFDSRFLPTSDGDYMFQMPPNNIQAMYTPGYLECK
                     ESTF"
     misc_feature    146..>841
                     /gene="LOC139839835"
                     /note="Transcriptional repressor [Transcription]; Region:
                     MOT2; COG5175"
                     /db_xref="CDD:227502"
ORIGIN      
        1 ctttcgttta ttttatgccg tactcgtgag tttcagtctt cgcttcagtt ctcattatat
       61 acatcgattt cgttactcaa tttattttgc tgttgtgttt attgatcttt cgctgtatct
      121 atcacttgaa atcatgagtt atgttgaaga gaaaaagtgt cctctgtgtg ctgaagagat
      181 ggattggact gatcaacagt tgaatccttg taaatgtggt tatgaggtgt gcgtttggtg
      241 ttggcatcac ataatggaca tggcagagaa ggacgcgaca gaaggacgat gtcctgcatg
      301 tcgcacacct tacgataagg atagaattgt aggattggaa acaaattttc aaagggtgtc
      361 tagcaatagt tcaagtcgaa aacaaaaact acaaaaggca aaatcaaaac caaatgaagg
      421 aaggaaggac cttagcaatg ttcgagtaat tcagcgaaaa atggcttata tcattggact
      481 gcctcttgat cttgctgatg aagatctatt gcagagaaaa agttattttg gccaatatgg
      541 aaaaataatg aaggtttcat tatctaggac ttcaggaggg gcccttcagc agcttatcaa
      601 tgatacttgc agtgtatata ttacttactc aaaagaggac gaagctgtga cctgtattca
      661 gtcagtgcat ggatatgtgt tggatggtag gcttttaaga gcatcatttg ggactgcaaa
      721 gtattgtcat gcttggttga gaaacacgtc ttgcgacaat cccgcatgtt tatatttgca
      781 tactcttggt gctgaagaag atagttttgg taaagatgaa gtagctgcag ttcatactag
      841 gaatagggtt caggaaatag ttggtgccac ccaatattta cagagacggg cggggactat
      901 gctgccacca cctgtaattg ggcggtcaaa taaccacagt gcttcggctg aggatcccgt
      961 gtttgacagt ggactgaaag taagagatta taatcatgat gaagcttatg gtacagtagc
     1021 ttcaggtggt catctttcgg tcaaatcgtc caaacaaatg acaagttttg tagatattgt
     1081 tgggcaatca tctagttcaa gttctgataa agatgtcaac tcaagagacg aagaccaaag
     1141 attgaatgat gagactgaaa tcccagattc agttatagtg aagtcatcaa ctcccaacca
     1201 actcgctgat tcaccaacct atgatgatca aagattgaag ggttctgttg gatcgggtca
     1261 tactgtttcc tgctttcctt cttatcctgc tgataccact aaagagtgta gtgatatttc
     1321 tttggggcat aatagatatc ataatcataa tcatatagga agctacacaa atgaagaaga
     1381 tactgtacgc tctccatata tgaattcggt attcagtgat ggattccaaa gttcagctaa
     1441 atcagatagg atatacagag ggtctaattc tttttctaat gaagaaattg tggaacgctt
     1501 gagacggatt gatgatgata cactagtgga taatgataat gatgaaaatt ttgcttcctt
     1561 tgaagataat ataatatcca atattttgtc gttggattta gatggtgata attcagatta
     1621 ccctcgaacg gtagcaagag atggacggaa tagttctgcg tggaatattc aaaacaatgg
     1681 tcaatcgagt ttttcatatg caaaggaaca tgaattttct ggtcaacgaa atgacttggt
     1741 atctcctagc aacattggtc aaggactaac tttttctggt cttcagaatt cttccgataa
     1801 caaaaacagt tttttcacgt cccagcatca agtagcacct aggactcaga acatgacccc
     1861 accaggattt accatgatca gtaagccgcc acctggtttt tctacaagca cgagaactga
     1921 tcagaatgtt tctgctaact ctggaaatta ttacagggct gcaccaaaca atctttatcg
     1981 ttcaccatca tttgggaatc taagcaacag ctccgatgac cttgttggcg gggtcaaacc
     2041 agccacaaac gggttgttga ccagctcctg gacctcatcc tttccatctc gatgctccat
     2101 tgatgataac tcaaaacaat ggctattcac acaacaacaa tcgggacccg ttactgctcc
     2161 acatcatcat catcatcacg aaactcaact ttctcaaccc acaatgcagc aatatcatca
     2221 cacaacaccc cagtttcctt cttctcaggg taaattgtat ggtggtatct catcgggggt
     2281 agtagatcca caccaccaaa gctacaatcc gtcttcatat aaccaacagc ctccaaagtt
     2341 tgcaggggga tatcagcagc ataacatcaa ccatttaccg ttttctcaac aacatgataa
     2401 tagaagcgag gtggggaggt ttggatttga cagccgtttc ttgcctacta gtgatggtga
     2461 ctatatgttc caaatgcccc caaacaacat tcaggcgatg tatacccctg ggtatttgga
     2521 atgtaaagaa tccacctttt aaacttctct ctagttgata aatatgaatg agcaggttac
     2581 tctaaattgg tctttatgtt tttttcaatc attttggttg tggatgggtt atgaaatttg
     2641 caactaattt tgtcttggaa attttcatat tagattggca tggttttttt atcttctagg
     2701 aaagttaata gtaactaaaa ccctttttat gcaata
//
LOCUS       XM_071830004            2733 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839835), transcript variant X2, mRNA.
ACCESSION   XM_071830004
VERSION     XM_071830004.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2733
                     /gene="LOC139839835"
                     /note="uncharacterized LOC139839835; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839835"
     CDS             134..2539
                     /gene="LOC139839835"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686105.1"
                     /db_xref="GeneID:139839835"
                     /translation="MSYVEEKKCPLCAEEMDWTDQQLNPCKCGYEVCVWCWHHIMDMA
                     EKDATEGRCPACRTPYDKDRIVGLETNFQRVSSNSSSRKQKLQKAKSKPNEGRKDLSN
                     VRVIQRKMAYIIGLPLDLADEDLLQRKSYFGQYGKIMKVSLSRTSGGALQQLINDTCS
                     VYITYSKEDEAVTCIQSVHGYVLDGRLLRASFGTAKYCHAWLRNTSCDNPACLYLHTL
                     GAEEDSFGKDEVAAVHTRNRVQEIVGATQYLQRRAGTMLPPPVIGRSNNHSASAEDPV
                     FDSGLKVRDYNHDEAYGTVASGGHLSVKSSKQMTSFVDIVGQSSSSSSDKDVNSRDED
                     QRLNDETEIPDSVIVKSSTPNQLADSPTYDDQRLKGSVGSGHTVSCFPSYPADTTKEC
                     SDISLGHNRYHNHNHIGSYTNEEDTVRSPYMNSVFSDGFQSSAKSDRIYRGSNSFSNE
                     EIVERLRRIDDDTLVDNDNDENFASFEDNIISNILSLDLDGDNSDYPRTVARDGRNSS
                     AWNIQNNGQSSFSYAKEHEFSGQRNDLVSPSNIGQGLTFSGLQNSSDNKNSFFTSQHQ
                     APRTQNMTPPGFTMISKPPPGFSTSTRTDQNVSANSGNYYRAAPNNLYRSPSFGNLSN
                     SSDDLVGGVKPATNGLLTSSWTSSFPSRCSIDDNSKQWLFTQQQSGPVTAPHHHHHHE
                     TQLSQPTMQQYHHTTPQFPSSQGKLYGGISSGVVDPHHQSYNPSSYNQQPPKFAGGYQ
                     QHNINHLPFSQQHDNRSEVGRFGFDSRFLPTSDGDYMFQMPPNNIQAMYTPGYLECKE
                     STF"
     misc_feature    146..>841
                     /gene="LOC139839835"
                     /note="Transcriptional repressor [Transcription]; Region:
                     MOT2; COG5175"
                     /db_xref="CDD:227502"
ORIGIN      
        1 ctttcgttta ttttatgccg tactcgtgag tttcagtctt cgcttcagtt ctcattatat
       61 acatcgattt cgttactcaa tttattttgc tgttgtgttt attgatcttt cgctgtatct
      121 atcacttgaa atcatgagtt atgttgaaga gaaaaagtgt cctctgtgtg ctgaagagat
      181 ggattggact gatcaacagt tgaatccttg taaatgtggt tatgaggtgt gcgtttggtg
      241 ttggcatcac ataatggaca tggcagagaa ggacgcgaca gaaggacgat gtcctgcatg
      301 tcgcacacct tacgataagg atagaattgt aggattggaa acaaattttc aaagggtgtc
      361 tagcaatagt tcaagtcgaa aacaaaaact acaaaaggca aaatcaaaac caaatgaagg
      421 aaggaaggac cttagcaatg ttcgagtaat tcagcgaaaa atggcttata tcattggact
      481 gcctcttgat cttgctgatg aagatctatt gcagagaaaa agttattttg gccaatatgg
      541 aaaaataatg aaggtttcat tatctaggac ttcaggaggg gcccttcagc agcttatcaa
      601 tgatacttgc agtgtatata ttacttactc aaaagaggac gaagctgtga cctgtattca
      661 gtcagtgcat ggatatgtgt tggatggtag gcttttaaga gcatcatttg ggactgcaaa
      721 gtattgtcat gcttggttga gaaacacgtc ttgcgacaat cccgcatgtt tatatttgca
      781 tactcttggt gctgaagaag atagttttgg taaagatgaa gtagctgcag ttcatactag
      841 gaatagggtt caggaaatag ttggtgccac ccaatattta cagagacggg cggggactat
      901 gctgccacca cctgtaattg ggcggtcaaa taaccacagt gcttcggctg aggatcccgt
      961 gtttgacagt ggactgaaag taagagatta taatcatgat gaagcttatg gtacagtagc
     1021 ttcaggtggt catctttcgg tcaaatcgtc caaacaaatg acaagttttg tagatattgt
     1081 tgggcaatca tctagttcaa gttctgataa agatgtcaac tcaagagacg aagaccaaag
     1141 attgaatgat gagactgaaa tcccagattc agttatagtg aagtcatcaa ctcccaacca
     1201 actcgctgat tcaccaacct atgatgatca aagattgaag ggttctgttg gatcgggtca
     1261 tactgtttcc tgctttcctt cttatcctgc tgataccact aaagagtgta gtgatatttc
     1321 tttggggcat aatagatatc ataatcataa tcatatagga agctacacaa atgaagaaga
     1381 tactgtacgc tctccatata tgaattcggt attcagtgat ggattccaaa gttcagctaa
     1441 atcagatagg atatacagag ggtctaattc tttttctaat gaagaaattg tggaacgctt
     1501 gagacggatt gatgatgata cactagtgga taatgataat gatgaaaatt ttgcttcctt
     1561 tgaagataat ataatatcca atattttgtc gttggattta gatggtgata attcagatta
     1621 ccctcgaacg gtagcaagag atggacggaa tagttctgcg tggaatattc aaaacaatgg
     1681 tcaatcgagt ttttcatatg caaaggaaca tgaattttct ggtcaacgaa atgacttggt
     1741 atctcctagc aacattggtc aaggactaac tttttctggt cttcagaatt cttccgataa
     1801 caaaaacagt tttttcacgt cccagcatca agcacctagg actcagaaca tgaccccacc
     1861 aggatttacc atgatcagta agccgccacc tggtttttct acaagcacga gaactgatca
     1921 gaatgtttct gctaactctg gaaattatta cagggctgca ccaaacaatc tttatcgttc
     1981 accatcattt gggaatctaa gcaacagctc cgatgacctt gttggcgggg tcaaaccagc
     2041 cacaaacggg ttgttgacca gctcctggac ctcatccttt ccatctcgat gctccattga
     2101 tgataactca aaacaatggc tattcacaca acaacaatcg ggacccgtta ctgctccaca
     2161 tcatcatcat catcacgaaa ctcaactttc tcaacccaca atgcagcaat atcatcacac
     2221 aacaccccag tttccttctt ctcagggtaa attgtatggt ggtatctcat cgggggtagt
     2281 agatccacac caccaaagct acaatccgtc ttcatataac caacagcctc caaagtttgc
     2341 agggggatat cagcagcata acatcaacca tttaccgttt tctcaacaac atgataatag
     2401 aagcgaggtg gggaggtttg gatttgacag ccgtttcttg cctactagtg atggtgacta
     2461 tatgttccaa atgcccccaa acaacattca ggcgatgtat acccctgggt atttggaatg
     2521 taaagaatcc accttttaaa cttctctcta gttgataaat atgaatgagc aggttactct
     2581 aaattggtct ttatgttttt ttcaatcatt ttggttgtgg atgggttatg aaatttgcaa
     2641 ctaattttgt cttggaaatt ttcatattag attggcatgg tttttttatc ttctaggaaa
     2701 gttaatagta actaaaaccc tttttatgca ata
//
LOCUS       XM_071830005            2718 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839835), transcript variant X3, mRNA.
ACCESSION   XM_071830005
VERSION     XM_071830005.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2718
                     /gene="LOC139839835"
                     /note="uncharacterized LOC139839835; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839835"
     CDS             134..2524
                     /gene="LOC139839835"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071686106.1"
                     /db_xref="GeneID:139839835"
                     /translation="MSYVEEKKCPLCAEEMDWTDQQLNPCKCGYEVCVWCWHHIMDMA
                     EKDATEGRCPACRTPYDKDRIVGLETNFQRVSSNSSSRKQKLQKAKSKPNEGRKDLSN
                     VRVIQRKMAYIIGLPLDLADEDLLQRKSYFGQYGKIMKVSLSRTSGGALQQLINDTCS
                     VYITYSKEDEAVTCIQSVHGYVLDGRLLRASFGTAKYCHAWLRNTSCDNPACLYLHTL
                     GAEEDSFGKDEVAAVHTRNRVQEIVGATQYLQRRAGTMLPPPVIGRSNNHSASAEDPV
                     FDSGLKDEAYGTVASGGHLSVKSSKQMTSFVDIVGQSSSSSSDKDVNSRDEDQRLNDE
                     TEIPDSVIVKSSTPNQLADSPTYDDQRLKGSVGSGHTVSCFPSYPADTTKECSDISLG
                     HNRYHNHNHIGSYTNEEDTVRSPYMNSVFSDGFQSSAKSDRIYRGSNSFSNEEIVERL
                     RRIDDDTLVDNDNDENFASFEDNIISNILSLDLDGDNSDYPRTVARDGRNSSAWNIQN
                     NGQSSFSYAKEHEFSGQRNDLVSPSNIGQGLTFSGLQNSSDNKNSFFTSQHQVAPRTQ
                     NMTPPGFTMISKPPPGFSTSTRTDQNVSANSGNYYRAAPNNLYRSPSFGNLSNSSDDL
                     VGGVKPATNGLLTSSWTSSFPSRCSIDDNSKQWLFTQQQSGPVTAPHHHHHHETQLSQ
                     PTMQQYHHTTPQFPSSQGKLYGGISSGVVDPHHQSYNPSSYNQQPPKFAGGYQQHNIN
                     HLPFSQQHDNRSEVGRFGFDSRFLPTSDGDYMFQMPPNNIQAMYTPGYLECKESTF"
     misc_feature    146..>841
                     /gene="LOC139839835"
                     /note="Transcriptional repressor [Transcription]; Region:
                     MOT2; COG5175"
                     /db_xref="CDD:227502"
ORIGIN      
        1 ctttcgttta ttttatgccg tactcgtgag tttcagtctt cgcttcagtt ctcattatat
       61 acatcgattt cgttactcaa tttattttgc tgttgtgttt attgatcttt cgctgtatct
      121 atcacttgaa atcatgagtt atgttgaaga gaaaaagtgt cctctgtgtg ctgaagagat
      181 ggattggact gatcaacagt tgaatccttg taaatgtggt tatgaggtgt gcgtttggtg
      241 ttggcatcac ataatggaca tggcagagaa ggacgcgaca gaaggacgat gtcctgcatg
      301 tcgcacacct tacgataagg atagaattgt aggattggaa acaaattttc aaagggtgtc
      361 tagcaatagt tcaagtcgaa aacaaaaact acaaaaggca aaatcaaaac caaatgaagg
      421 aaggaaggac cttagcaatg ttcgagtaat tcagcgaaaa atggcttata tcattggact
      481 gcctcttgat cttgctgatg aagatctatt gcagagaaaa agttattttg gccaatatgg
      541 aaaaataatg aaggtttcat tatctaggac ttcaggaggg gcccttcagc agcttatcaa
      601 tgatacttgc agtgtatata ttacttactc aaaagaggac gaagctgtga cctgtattca
      661 gtcagtgcat ggatatgtgt tggatggtag gcttttaaga gcatcatttg ggactgcaaa
      721 gtattgtcat gcttggttga gaaacacgtc ttgcgacaat cccgcatgtt tatatttgca
      781 tactcttggt gctgaagaag atagttttgg taaagatgaa gtagctgcag ttcatactag
      841 gaatagggtt caggaaatag ttggtgccac ccaatattta cagagacggg cggggactat
      901 gctgccacca cctgtaattg ggcggtcaaa taaccacagt gcttcggctg aggatcccgt
      961 gtttgacagt ggactgaaag atgaagctta tggtacagta gcttcaggtg gtcatctttc
     1021 ggtcaaatcg tccaaacaaa tgacaagttt tgtagatatt gttgggcaat catctagttc
     1081 aagttctgat aaagatgtca actcaagaga cgaagaccaa agattgaatg atgagactga
     1141 aatcccagat tcagttatag tgaagtcatc aactcccaac caactcgctg attcaccaac
     1201 ctatgatgat caaagattga agggttctgt tggatcgggt catactgttt cctgctttcc
     1261 ttcttatcct gctgatacca ctaaagagtg tagtgatatt tctttggggc ataatagata
     1321 tcataatcat aatcatatag gaagctacac aaatgaagaa gatactgtac gctctccata
     1381 tatgaattcg gtattcagtg atggattcca aagttcagct aaatcagata ggatatacag
     1441 agggtctaat tctttttcta atgaagaaat tgtggaacgc ttgagacgga ttgatgatga
     1501 tacactagtg gataatgata atgatgaaaa ttttgcttcc tttgaagata atataatatc
     1561 caatattttg tcgttggatt tagatggtga taattcagat taccctcgaa cggtagcaag
     1621 agatggacgg aatagttctg cgtggaatat tcaaaacaat ggtcaatcga gtttttcata
     1681 tgcaaaggaa catgaatttt ctggtcaacg aaatgacttg gtatctccta gcaacattgg
     1741 tcaaggacta actttttctg gtcttcagaa ttcttccgat aacaaaaaca gttttttcac
     1801 gtcccagcat caagtagcac ctaggactca gaacatgacc ccaccaggat ttaccatgat
     1861 cagtaagccg ccacctggtt tttctacaag cacgagaact gatcagaatg tttctgctaa
     1921 ctctggaaat tattacaggg ctgcaccaaa caatctttat cgttcaccat catttgggaa
     1981 tctaagcaac agctccgatg accttgttgg cggggtcaaa ccagccacaa acgggttgtt
     2041 gaccagctcc tggacctcat cctttccatc tcgatgctcc attgatgata actcaaaaca
     2101 atggctattc acacaacaac aatcgggacc cgttactgct ccacatcatc atcatcatca
     2161 cgaaactcaa ctttctcaac ccacaatgca gcaatatcat cacacaacac cccagtttcc
     2221 ttcttctcag ggtaaattgt atggtggtat ctcatcgggg gtagtagatc cacaccacca
     2281 aagctacaat ccgtcttcat ataaccaaca gcctccaaag tttgcagggg gatatcagca
     2341 gcataacatc aaccatttac cgttttctca acaacatgat aatagaagcg aggtggggag
     2401 gtttggattt gacagccgtt tcttgcctac tagtgatggt gactatatgt tccaaatgcc
     2461 cccaaacaac attcaggcga tgtatacccc tgggtatttg gaatgtaaag aatccacctt
     2521 ttaaacttct ctctagttga taaatatgaa tgagcaggtt actctaaatt ggtctttatg
     2581 tttttttcaa tcattttggt tgtggatggg ttatgaaatt tgcaactaat tttgtcttgg
     2641 aaattttcat attagattgg catggttttt ttatcttcta ggaaagttaa tagtaactaa
     2701 aacccttttt atgcaata
//
LOCUS       XM_071830006            2626 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pyrophosphate-energized
            vacuolar membrane proton pump-like (LOC139839836), mRNA.
ACCESSION   XM_071830006
VERSION     XM_071830006.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2626
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2626
                     /gene="LOC139839836"
                     /note="pyrophosphate-energized vacuolar membrane proton
                     pump-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 47 Proteins"
                     /db_xref="GeneID:139839836"
     CDS             104..2395
                     /gene="LOC139839836"
                     /codon_start=1
                     /product="pyrophosphate-energized vacuolar membrane proton
                     pump-like"
                     /protein_id="XP_071686107.1"
                     /db_xref="GeneID:139839836"
                     /translation="MGTTILSDLGTEIVIPVCAIIGIVFSLFQWYLVSQVKLSPEKPS
                     GDAKNGFTESLIEEEEGINDHTVVQKCAEIQNAISEGATSFLYTEYQYVGVFMVIFAV
                     LIFLFLGSVESFSTSNKVCTYDVTKMCKPALMTAVFSTVAFVLGAVTSVVSGFLGMKI
                     ATYANARTTLEARKGVSKAFIVAFRSGAVMGFLLAANGLLVLYIIINLFKLYYGDDWE
                     GLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIAD
                     NVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGTTHDFTAMMYPLIVSSVGIIV
                     CLITTLFATDFFEVKEVKQIEPSLKNQLIISTVLMTIGIAVVSWIALPSSFTIFDFGT
                     QKVVKNWQLFLCVCVGLWAGLIIGFVTEYYTSNAYSPVQEVAESCRTGAATNVIFGLA
                     LGYQSVIIPIFAIAISIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGG
                     IAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAEITTVN
                     VLTPKVFIGLLVGAMLPYWFSAMTMKSVGTAALAMVEEVRRQFNTIPGLMEGTGKPDY
                     ATCVKISTDASIKEMIPPGCLVMLTPLIVGILFGVETLSGVLAGSLISGVQIAISASN
                     TGGAWDNAKKYIEAGVSDAAKALGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKL
                     MAVESLVFAPFFATHGGILFKYL"
     misc_feature    113..2392
                     /gene="LOC139839836"
                     /note="H(+) -translocating inorganic pyrophosphatase;
                     Region: PLN02255"
                     /db_xref="CDD:215143"
     polyA_site      2626
                     /gene="LOC139839836"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctcaccatt tcattcgccc aaaaagagag atatatacag gatacaccac acatatatct
       61 atctatatat atctattcgt tctgatctaa ttttccggcc aaaatgggga ccacgatcct
      121 ctcagatctc ggcactgaaa tcgttatccc agtttgtgca attattggaa tcgtattctc
      181 tctatttcaa tggtacctcg tttcgcaggt gaaactctcg ccggaaaaac cttccggcga
      241 cgctaaaaat ggtttcactg aatcgttgat tgaagaagaa gaaggaatta acgaccatac
      301 agtcgttcag aaatgtgctg aaatccaaaa cgctatttca gaaggagcaa cctcgttctt
      361 gtacactgaa taccaatatg ttggtgtttt catggtcatt tttgctgttc tgatctttct
      421 attccttggc tctgttgaaa gtttcagcac cagtaataaa gtatgcacat atgatgtcac
      481 caagatgtgc aagcctgctc taatgacagc tgtcttcagc actgttgctt ttgtgcttgg
      541 tgccgtcacc tcagtcgtat ctggtttctt aggaatgaaa attgccacat atgcaaatgc
      601 cagaactacc cttgaagcta gaaagggtgt cagtaaggcc ttcattgttg cattccgatc
      661 tggtgcagtc atggggttcc ttcttgctgc aaacggtctt ttagtacttt atattattat
      721 caacctattc aagctttact atggtgatga ttgggaaggt ctttttgagt cgattactgg
      781 ttatggactt ggtggttcat ctatggcact ttttggtaga gttggtggcg gtatttatac
      841 aaaggctgct gatgttgggg ccgatcttgt tggcaaggtc gaaaggaaca tccctgaaga
      901 tgaccctagg aacccagcgg ttattgctga caacgtggga gacaacgtgg gagatattgc
      961 tggtatggga tctgatctgt ttggttcata tgctgagtca tcatgtgctg ctctcgttgt
     1021 tgcatccatt tcatcattcg ggaccactca cgattttacc gcaatgatgt acccgctcat
     1081 cgtgagctcc gtaggcatca ttgtgtgctt gatcactact ttgtttgcta ccgatttctt
     1141 tgaagtcaaa gaagtaaagc aaatcgagcc atctttgaaa aatcaactta ttatttcaac
     1201 cgtgctgatg actatcggta tcgcagttgt tagttggatt gctcttcctt ctagcttcac
     1261 catcttcgat tttggaaccc agaaagtagt aaagaactgg caattgttct tgtgtgtttg
     1321 tgttggtttg tgggccggtc ttattattgg atttgtaaca gagtactaca ctagcaatgc
     1381 ttacagccct gtgcaagaag ttgcggaatc ttgccgtact ggagctgcaa cgaatgttat
     1441 atttggtctt gctttgggat atcaatcagt tatcatcccg atttttgcaa ttgcaatcag
     1501 tatttttgtt agttttagct ttgctgctat gtatggtgtt gctgtagctg cacttgggat
     1561 gctgagcacc atagcaactg gtttagccat tgacgcgtat ggtcccatca gtgacaatgc
     1621 tggtggtata gccgaaatgg ctggtatgag ccacagaatt cgtgaacgaa ccgatgctct
     1681 tgatgctgct ggtaacacca ctgctgctat tggcaagggt tttgctatag gttctgcagc
     1741 tcttgtatcc ttggctcttt tcggtgcatt tgtgagtaga gccgagatta caaccgttaa
     1801 cgttttaacc cctaaagttt tcatcggttt gctcgtgggt gccatgcttc catactggtt
     1861 ttcggccatg acaatgaaga gtgtggggac cgctgcactt gcaatggttg aagaagtccg
     1921 tagacaattc aacactattc ccggtctcat ggaaggtacc ggtaaacctg attacgccac
     1981 ctgcgttaaa atctcgactg acgcatccat taaagagatg atcccgcctg gttgtcttgt
     2041 catgctaact ccccttattg ttgggatctt atttggcgtc gaaacacttt ctggtgttct
     2101 tgctggatcg ctcatctctg gtgtacagat cgctatctct gcatcaaaca ctggtggtgc
     2161 ttgggacaac gctaagaaat acattgaggc tggtgtttct gatgcggcta aggctcttgg
     2221 accgaaaggg tcggacgctc acaaggcggc tgtgattgga gacaccgttg gtgatccttt
     2281 gaaggataca tctgggccat cactaaacat tctgataaag ctcatggctg ttgaatcttt
     2341 ggtgtttgct ccgttctttg caacccatgg gggcattctg ttcaagtatc tatagattca
     2401 acatcatgac gacaatggtc tttgggtggt aggcacatca tttcacctgt ttagttatat
     2461 cacatcattt atagcacatg cttaaaattt gtgggaatgt cttatttttg aaatttgttt
     2521 ggcacttgat tagcaacttc atttttgctt ttgagatttt gatgattacg aaatgtgatg
     2581 tagctatttt attcttttat gtcattgttt atctgaacca ttaaaa
//
LOCUS       XM_071830007            3712 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein EXPORTIN 1A-like
            (LOC139839837), mRNA.
ACCESSION   XM_071830007
VERSION     XM_071830007.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3712
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3712
                     /gene="LOC139839837"
                     /note="protein EXPORTIN 1A-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139839837"
     CDS             131..3361
                     /gene="LOC139839837"
                     /codon_start=1
                     /product="protein EXPORTIN 1A-like"
                     /protein_id="XP_071686108.1"
                     /db_xref="GeneID:139839837"
                     /translation="MAAEKLRDLSQPIDVALLDATVSAFYGTGSKDERTAADQILREL
                     QNNPDMWLQVVHILSSTQSLNTKFFALQVLEGVIKYRWNVLPVEQRDGMKNYISDVIV
                     KLSSNEASFRQERLYVNKLNVILVQILKHEWPARWRSFIPDLVTAAKTSETICENCMA
                     ILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLA
                     TLHAFLSWIPLGYIFESPLLETLLKFFSVPSYRNLTLQCLTEVTALNFGEFYNVQYVN
                     MYTIFMVQLQVVLPTSTNIPDVYANGSSEEQAFIQNLALFFTSFFKFHIRILESTQEN
                     VAALLMGLEYLLNISYVDDTEVFKVCLDYWNSFVLELFEANHNLENPAATANLMGIQN
                     PMIPGMADGHGTQLMQRRQLYAGSMSKLRLLMISRMAKPEEVLIVEDENGNIVRETLK
                     DNDVLVQYKIMRETLIYLSHLDHMDTEKQMLRKLSKQLNGEDWTWNNLNTLCWAIGSI
                     SGSMLEDQENRFLVMVIRDLLNLCEIIKGKDNKAVIASNIMYVVGQYPRFLRAHWKFL
                     KTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGESEPFVSELLTSLPN
                     TIMDLEPHQIHTFYESVGCMIQAESEAIKREEYLQRLMTLPNQKWAEIIGHARGSVDF
                     LKDQDVIRTVLNILQTNTSVASALGTHFLSQITLIFLDMLNVYKMYSELISSSIAEGG
                     PYASRTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNLPD
                     ARESEVLSLFATIINKYKIAMIDDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLL
                     RAIATYCFRALILLSPEQLKLVMDSVMWAFRHTERNIAETGLILLLEMLKNFQNSEFC
                     NQFYRSYFVLIVQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGSLTEPLWDASTVS
                     YSYPSNGIFVREYTIKLLCGSFPNIPASEVTRFVNGLFESRADLSTFKNHIRDFLVQS
                     KEFSTQDNKDLYAEEAAAQKERERQRMLSIPGLIAPNEIQDEMVDS"
     misc_feature    140..3295
                     /gene="LOC139839837"
                     /note="Importin beta-related nuclear transport receptor
                     [Nuclear structure / Intracellular trafficking and
                     secretion]; Region: CRM1; COG5101"
                     /db_xref="CDD:227432"
     polyA_site      3712
                     /gene="LOC139839837"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttctagta tctgtatata ccatctgctt ccttttctcc ccttttaggg tttcgtccgt
       61 acactccttt cattttcaaa cagagtcctt ctacaaaatc tagggtttta cacttgttaa
      121 tttctctgcg atggcagcgg agaagcttag ggatttaagt caaccgattg acgttgcgtt
      181 acttgatgct actgtttctg ccttctatgg cactggatct aaagatgaga ggacagctgc
      241 cgatcagata ttgcgagaat tgcagaacaa tccagatatg tggctacaag tggttcacat
      301 tctgtccagt acgcagagct tgaacaccaa attctttgct ttacaggttc ttgagggtgt
      361 tatcaagtat agatggaatg tattgcctgt tgagcaacga gatggaatga aaaactacat
      421 atctgatgtt attgtaaagc tttcgagtaa cgaggcttct ttccggcaag aaaggctgta
      481 tgttaacaaa cttaacgtta tactagttca gattttgaag cacgagtggc ctgccaggtg
      541 gcggagtttc atcccagacc tggttacagc agcaaaaact agtgaaacaa tttgtgagaa
      601 ctgtatggca atactgaaac ttctaagtga agaggtattt gatttctcta ggggtgaaat
      661 gactcaacaa aagatcaagg agcttaaaca atctctaaac agcgagtttc aactcattca
      721 tgagttatgc ttatatgtac tatcagcatc tcaaagaaca gagctaatta gggcaacact
      781 agcaacatta cacgctttcc tttcatggat tcctttggga tatatttttg aatctccact
      841 gctggagaca ctccttaaat ttttctctgt gccatcatat cgtaatttga cacttcagtg
      901 cttgacagag gttactgcct tgaattttgg agaattttac aatgtacaat atgttaatat
      961 gtacaccatc tttatggtcc agttgcaggt cgttcttcca accagtacaa atataccgga
     1021 tgtgtatgct aatggctcaa gcgaggagca ggcatttatt cagaatctgg cattgttttt
     1081 tacttcattc ttcaagtttc atatccgcat cctggaatct acccaagaga acgtagctgc
     1141 acttttgatg ggccttgagt atctcttgaa tatttcttat gtggatgata cagaagtttt
     1201 caaggtttgc ttggactatt ggaactcctt tgtgttagag ctttttgagg caaaccataa
     1261 tcttgagaac cctgcagcaa ctgcaaactt gatgggaatt cagaatccga tgattccggg
     1321 tatggctgat ggtcatggta cacaactgat gcaaagacgg caactctatg cggggtccat
     1381 gtcaaagttg agactgctta tgatatcccg tatggcaaaa cctgaagagg tattaatcgt
     1441 tgaagatgaa aatgggaata ttgttcgtga aaccttgaaa gacaatgatg ttcttgttca
     1501 gtataagata atgagagaaa cactcatcta cttgtcgcat cttgatcaca tggacactga
     1561 gaagcagatg ttgaggaagc taagcaaaca actgaatggt gaggattgga catggaacaa
     1621 cctaaacacc ctatgctggg caataggatc tatatctgga tccatgttag aagatcagga
     1681 gaataggttt cttgtcatgg ttattcgtga tctactaaat ctttgtgaaa taataaaagg
     1741 aaaggataac aaagctgtta ttgcaagtaa tataatgtat gttgttgggc aatatccaag
     1801 atttctgaga gcccactgga agtttttgaa aactgttgta aacaagttgt ttgagttcat
     1861 gcacgaaaca caccctgggg ttcaggatat ggcatgtgac acatttttga aaattgtaca
     1921 gaaatgcaag cgcaagtttg ttatagtgca ggttggtgag agtgagccat ttgtctcaga
     1981 actgcttact agtcttccga acacaattat ggacctcgag ccacatcaga tacatacatt
     2041 ttatgaatcg gttggttgta tgattcaagc agaatccgag gctataaagc gggaggaata
     2101 cttacagagg ctgatgactc tccctaatca gaaatgggct gaaattatag gacatgcgcg
     2161 tggcagtgtt gatttcttaa aggatcaaga tgtcattagg actgttctta atatattgca
     2221 gacaaacaca agtgttgcca gtgcactcgg aacacacttt ttgtctcaga tcacactcat
     2281 atttttggac atgcttaatg tctacaaaat gtacagtgag ctaatatcat ccagcattgc
     2341 tgaaggcggg ccctacgcat ctaggacatc ttatgtaaaa cttttgagat ctgtgaagag
     2401 ggaaacactg aagctgattg agacatttct ggataaggct gaagatcaac cacaaatagg
     2461 aaagcaattt gtgcccccaa tgatggatcc agtgcttggt gattatgctc ggaatttgcc
     2521 cgatgctcga gaatcggaag ttttgtctct ctttgctaca attattaata agtacaagat
     2581 agctatgatt gacgacgttc cacgtatatt tgaagctgtc ttccagtgca ccctagagat
     2641 gataaccaag aattttgaag attatcccga acatcggctc aagttctttt ctttacttcg
     2701 ggccattgct acgtattgtt ttcgggcact aatcctgttg tcccctgagc aattaaagct
     2761 tgttatggat tctgtcatgt gggctttccg acacacagaa agaaacattg ctgaaactgg
     2821 gcttattctg ttgttagaga tgctgaagaa ctttcagaat tctgagtttt gcaatcagtt
     2881 ctaccggtcc tactttgtgc tgattgtgca agaaatattt gctgttctaa ccgacacatt
     2941 tcacaaacct ggtttcaagc tgcatgtctt agtgttgcag cacttattct gcctggtgga
     3001 atctggttca ctgacggaac ctttatggga tgcatctaca gtttcatact cttaccctag
     3061 taatggtata tttgttcgag agtataccat taagcttctg tgtggctctt ttccaaatat
     3121 accagcatca gaggttacta ggtttgttaa tggattgttt gagtcgagag ctgatctttc
     3181 tacattcaag aaccacataa gggactttct tgtgcagtct aaggaatttt caactcagga
     3241 taacaaggat ctatatgcag aagaagctgc tgcacagaaa gaaagagaga gacaacggat
     3301 gcttagcata cctggactaa ttgcgccaaa tgaaatacaa gatgagatgg ttgattcata
     3361 aaataaaata atgactagtc gtatgattta ctacttacta atggaggggg ggcagtgtgg
     3421 taattggtaa atgtttgttg tattttgatt gaggataaag tatcttgtct tggatacaaa
     3481 agaaaggcat ttgggggatg tgtggagtag tactagtact agtatagaag attctgttgt
     3541 aggaaaggaa tgtttgtgtg ggaatttctg aaagagagaa tgttagttag gtatacctgc
     3601 cagctcttct cttattggtt ttcaaattgt gtaacgtata cttactatat agacaataga
     3661 ctgctagcaa agttttgcag atttttattt ttaaatacaa aaaattgtga aa
//
LOCUS       XM_071830008            1114 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839838), mRNA.
ACCESSION   XM_071830008
VERSION     XM_071830008.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1114
                     /gene="LOC139839838"
                     /note="uncharacterized LOC139839838; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839838"
     CDS             151..897
                     /gene="LOC139839838"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686109.1"
                     /db_xref="GeneID:139839838"
                     /translation="MTTNLPWHPLLSSKSPQFHPSTNKLFINSPNSFRVQAFQRSDFD
                     GFAKRMASGEALKDAWRNANNSFEQILYETKKAAERIDRQYSVRQRFSSAAQSASDRA
                     RELDRDYLITQRWRTFSLDFSRNWPRYRKQIGDSLDTPLGRSFGTIFFLWFALSGWLF
                     RILIFATWVLPIAGPLLIGAIANNLVIKGSCPACKRQFIGNKNQMVRCAGCGNIVWQP
                     KGDFFTKGGGRPSSSSKSNPEIIDVEFEEK"
     polyA_site      1114
                     /gene="LOC139839838"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaatacgtcg ttcagaaaac agatactcct tttccccaat caattgttat tagccacaag
       61 aaccatctca ccatcgtcac caccaaatcc aacccaaccc aacccaaccg ccgattaccg
      121 tttctgcaaa accctaaatt caactccacc atgacaacaa accttccgtg gcacccactc
      181 ctctcatcaa aatccccaca atttcatcct tccaccaaca aactattcat caattcacct
      241 aattcatttc gagttcaagc ttttcaacgt agcgattttg atggattcgc taaacgtatg
      301 gcgtcaggtg aagctttgaa agatgcttgg cgtaacgcta ataacagttt tgaacagata
      361 ctttatgaaa ctaaaaaagc agctgaacga attgaccgtc agtattctgt tcgtcaacgg
      421 ttttcatccg ctgcacagtc ggcgtctgac cgtgctagag aactcgaccg tgattatctg
      481 attacgcaac gctggcggac gtttagtctt gatttcagtc gcaattggcc taggtacagg
      541 aagcaaattg gtgactcctt agatactcca ttaggaagaa gctttgggac tatcttcttc
      601 ctctggtttg cgctttctgg atggctgttc aggatcctaa tatttgcaac atgggtgttg
      661 ccaattgctg gtcctctact tatcggtgct attgccaata acctggtcat taaggggtct
      721 tgtcctgctt gtaagaggca gtttatcggc aacaagaacc agatggtgcg ttgtgctggc
      781 tgtggaaaca ttgtctggca gccaaaagga gatttcttta cgaaaggtgg gggccgccct
      841 tcttcctctt caaagtctaa tccagagata atagatgttg agtttgaaga gaaataaaaa
      901 atggtttccc ataagtacca gtaagttact ggctcactta ctggctgtgt ctatacaatt
      961 tttagcttcg aggattacac tgtttacaca ctgttaagtt accatatcat atgttactat
     1021 cctgtattcg attagcgctt gtaggtctgt tagattctat aatgcaagtg taattcaact
     1081 atattatcgt aactgtgttt acaaattttt gtta
//
LOCUS       XM_071830009            1831 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839839), transcript variant X1, mRNA.
ACCESSION   XM_071830009
VERSION     XM_071830009.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1831
                     /gene="LOC139839839"
                     /note="uncharacterized LOC139839839; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839839"
     CDS             292..1635
                     /gene="LOC139839839"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686110.1"
                     /db_xref="GeneID:139839839"
                     /translation="MVFLKLKKFRKAHKQDNSPPVVGVPDEVPKGKSVVDVDNDNEID
                     NDNGATTAEAEAEEDDDDFIMNEVKRRLKELRRNSFMVLIPEEETCPEEEDDDVEQQV
                     EDQEKNDGESNQWRDVEAEGRQLWSCFGAFYDNYCQRMLFFDRLTTQLLKETFSLTGS
                     YTPSTPSPKSVSKKLTSPLGCLSLKTNQNQDPEGETQHLHQPENDPYLDLETSYVSQV
                     CLTWEALHCQYTQLRHIIASQSENSKCYNHTAQQFQQFQVLLQRFIENEPFERGLRPQ
                     VYAQTRNSFSKLLQVPNILGQERKEITQEESEMMVHAPDLIRIIESSILTFQLFIKMD
                     KNKSNGVRNLFGGQNSSNQMATPLQQVQYSLEKRKVKLKELWKKRKGGKKKLWPTTQE
                     EVELLLGLIDVKVISRVLRMVKLSKEQLFWSEEKMMKLDLSGKLQRDPSPILFPC"
     misc_feature    916..1629
                     /gene="LOC139839839"
                     /note="Protein of unknown function (DUF1666); Region:
                     DUF1666; pfam07891"
                     /db_xref="CDD:462306"
     polyA_site      1831
                     /gene="LOC139839839"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttttgtcttc cccacaagtt ttctagggtt tcattttctc gtgcttcagg ttggtgcaaa
       61 acttctgatt tttttgctgt cttttttgtt ctaataggtc cactactacc tgtttacatt
      121 atgaagaaat tggtcagatc taccatccat ctaatctaat ttgttggtat tgcatataag
      181 gtcatttgat ttgattttat gggcgtcaaa ttttgtgttt aattagaggt ctcgggggtt
      241 tgaaattggt tttgcatctc atcgtttggt ttgaattaga aggataagga tatggtgttt
      301 cttaagttga agaagtttag gaaagcccac aaacaagaca acagtcctcc tgttgttggt
      361 gttcctgatg aagttcccaa gggtaagtcg gtggtggatg ttgataatga taatgagatt
      421 gataacgata atggtgctac tactgcagag gcagaggcag aggaggacga tgatgatttt
      481 atcatgaatg aggtgaagag aaggctgaaa gaacttagaa gaaatagttt tatggttctc
      541 atacctgaag aagaaacatg tcccgaagag gaggatgatg atgttgaaca acaagtggaa
      601 gatcaggaga agaatgatgg tgaatccaat cagtggaggg atgttgaagc agaaggccgt
      661 caattgtggt cttgttttgg ggctttttat gataactact gccaacgcat gctcttcttt
      721 gatcgtctta ctactcagct gctcaaagaa actttttcac tcacaggttc atatactccc
      781 tccactcctt caccaaagtc tgtgtccaag aagctcacat ccccacttgg atgtctgtct
      841 ttgaaaacaa atcagaatca ggatcctgaa ggtgaaacac aacacctgca tcaaccagag
      901 aacgatccat atctggatct tgagacctca tatgtatcgc aagtgtgctt gacttgggag
      961 gcacttcact gccagtacac acaattaaga cacataatcg catctcagtc tgaaaactcc
     1021 aaatgttaca accatactgc tcagcaattc cagcagtttc aggttctgtt gcaacgattt
     1081 attgaaaatg aacctttcga gcgtggtctc aggcctcaag tttatgctca aaccagaaat
     1141 tccttttcta aacttcttca ggttccaaat atattaggtc aagagaggaa agagataaca
     1201 caagaggaat cagaaatgat ggtgcatgct ccagatctta tcagaataat tgagagctca
     1261 attcttactt ttcaactctt tataaagatg gacaagaaca agtcaaatgg tgtccggaat
     1321 ctctttggag gccagaatag cagcaaccag atggccactc ctcttcagca ggttcaatat
     1381 tcacttgaga agaggaaggt gaagttgaag gagctgtgga aaaagaggaa aggcgggaaa
     1441 aagaaattgt ggcctacaac acaagaggag gtggagttgt tacttgggct tatagatgtg
     1501 aaggtgataa gcagggtgct acggatggtg aagcttagca aagagcaatt gttttggagt
     1561 gaagaaaaga tgatgaagct ggatttatca ggaaaactcc aaagggatcc gtctcccatt
     1621 cttttccctt gttgatagtc aaatgatgca ggcaaggcaa ggcaggcatg gcgtatcaaa
     1681 tagatggcac catattatta gtagtaacta gccaagtatt ttttctttag tagcattgta
     1741 aatttaactt taagagattt tgttatttca tcatctgtga attgaaggct tagtagcttt
     1801 atgcagtgac gttaatgttt cttttaaaac a
//
LOCUS       XM_071830010            1668 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839839), transcript variant X2, mRNA.
ACCESSION   XM_071830010
VERSION     XM_071830010.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1668
                     /gene="LOC139839839"
                     /note="uncharacterized LOC139839839; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839839"
     CDS             129..1472
                     /gene="LOC139839839"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686111.1"
                     /db_xref="GeneID:139839839"
                     /translation="MVFLKLKKFRKAHKQDNSPPVVGVPDEVPKGKSVVDVDNDNEID
                     NDNGATTAEAEAEEDDDDFIMNEVKRRLKELRRNSFMVLIPEEETCPEEEDDDVEQQV
                     EDQEKNDGESNQWRDVEAEGRQLWSCFGAFYDNYCQRMLFFDRLTTQLLKETFSLTGS
                     YTPSTPSPKSVSKKLTSPLGCLSLKTNQNQDPEGETQHLHQPENDPYLDLETSYVSQV
                     CLTWEALHCQYTQLRHIIASQSENSKCYNHTAQQFQQFQVLLQRFIENEPFERGLRPQ
                     VYAQTRNSFSKLLQVPNILGQERKEITQEESEMMVHAPDLIRIIESSILTFQLFIKMD
                     KNKSNGVRNLFGGQNSSNQMATPLQQVQYSLEKRKVKLKELWKKRKGGKKKLWPTTQE
                     EVELLLGLIDVKVISRVLRMVKLSKEQLFWSEEKMMKLDLSGKLQRDPSPILFPC"
     misc_feature    753..1466
                     /gene="LOC139839839"
                     /note="Protein of unknown function (DUF1666); Region:
                     DUF1666; pfam07891"
                     /db_xref="CDD:462306"
     polyA_site      1668
                     /gene="LOC139839839"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtcagcactt ttggttttgt cttccccaca agttttctag ggtttcattt tctcgtgctt
       61 cagaggtctc gggggtttga aattggtttt gcatctcatc gtttggtttg aattagaagg
      121 ataaggatat ggtgtttctt aagttgaaga agtttaggaa agcccacaaa caagacaaca
      181 gtcctcctgt tgttggtgtt cctgatgaag ttcccaaggg taagtcggtg gtggatgttg
      241 ataatgataa tgagattgat aacgataatg gtgctactac tgcagaggca gaggcagagg
      301 aggacgatga tgattttatc atgaatgagg tgaagagaag gctgaaagaa cttagaagaa
      361 atagttttat ggttctcata cctgaagaag aaacatgtcc cgaagaggag gatgatgatg
      421 ttgaacaaca agtggaagat caggagaaga atgatggtga atccaatcag tggagggatg
      481 ttgaagcaga aggccgtcaa ttgtggtctt gttttggggc tttttatgat aactactgcc
      541 aacgcatgct cttctttgat cgtcttacta ctcagctgct caaagaaact ttttcactca
      601 caggttcata tactccctcc actccttcac caaagtctgt gtccaagaag ctcacatccc
      661 cacttggatg tctgtctttg aaaacaaatc agaatcagga tcctgaaggt gaaacacaac
      721 acctgcatca accagagaac gatccatatc tggatcttga gacctcatat gtatcgcaag
      781 tgtgcttgac ttgggaggca cttcactgcc agtacacaca attaagacac ataatcgcat
      841 ctcagtctga aaactccaaa tgttacaacc atactgctca gcaattccag cagtttcagg
      901 ttctgttgca acgatttatt gaaaatgaac ctttcgagcg tggtctcagg cctcaagttt
      961 atgctcaaac cagaaattcc ttttctaaac ttcttcaggt tccaaatata ttaggtcaag
     1021 agaggaaaga gataacacaa gaggaatcag aaatgatggt gcatgctcca gatcttatca
     1081 gaataattga gagctcaatt cttacttttc aactctttat aaagatggac aagaacaagt
     1141 caaatggtgt ccggaatctc tttggaggcc agaatagcag caaccagatg gccactcctc
     1201 ttcagcaggt tcaatattca cttgagaaga ggaaggtgaa gttgaaggag ctgtggaaaa
     1261 agaggaaagg cgggaaaaag aaattgtggc ctacaacaca agaggaggtg gagttgttac
     1321 ttgggcttat agatgtgaag gtgataagca gggtgctacg gatggtgaag cttagcaaag
     1381 agcaattgtt ttggagtgaa gaaaagatga tgaagctgga tttatcagga aaactccaaa
     1441 gggatccgtc tcccattctt ttcccttgtt gatagtcaaa tgatgcaggc aaggcaaggc
     1501 aggcatggcg tatcaaatag atggcaccat attattagta gtaactagcc aagtattttt
     1561 tctttagtag cattgtaaat ttaactttaa gagattttgt tatttcatca tctgtgaatt
     1621 gaaggcttag tagctttatg cagtgacgtt aatgtttctt ttaaaaca
//
LOCUS       XM_071830011            1819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839839), transcript variant X3, mRNA.
ACCESSION   XM_071830011
VERSION     XM_071830011.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1819
                     /gene="LOC139839839"
                     /note="uncharacterized LOC139839839; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839839"
     CDS             292..1623
                     /gene="LOC139839839"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686112.1"
                     /db_xref="GeneID:139839839"
                     /translation="MVFLKLKKFRKAHKQDNSPPVVGVPDEVPKGKSVVDVDNDNEID
                     NDNGATTAEAEAEEDDDDFIMNEVKRRLKELRRNSFMVLIPEEETCPEEEDDDVEQQV
                     EDQEKNDGESNQWRDVEAEGRQLWSCFGAFYDNYCQRMLFFDRLTTQLLKETCSYTPS
                     TPSPKSVSKKLTSPLGCLSLKTNQNQDPEGETQHLHQPENDPYLDLETSYVSQVCLTW
                     EALHCQYTQLRHIIASQSENSKCYNHTAQQFQQFQVLLQRFIENEPFERGLRPQVYAQ
                     TRNSFSKLLQVPNILGQERKEITQEESEMMVHAPDLIRIIESSILTFQLFIKMDKNKS
                     NGVRNLFGGQNSSNQMATPLQQVQYSLEKRKVKLKELWKKRKGGKKKLWPTTQEEVEL
                     LLGLIDVKVISRVLRMVKLSKEQLFWSEEKMMKLDLSGKLQRDPSPILFPC"
     misc_feature    904..1617
                     /gene="LOC139839839"
                     /note="Protein of unknown function (DUF1666); Region:
                     DUF1666; pfam07891"
                     /db_xref="CDD:462306"
     polyA_site      1819
                     /gene="LOC139839839"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttttgtcttc cccacaagtt ttctagggtt tcattttctc gtgcttcagg ttggtgcaaa
       61 acttctgatt tttttgctgt cttttttgtt ctaataggtc cactactacc tgtttacatt
      121 atgaagaaat tggtcagatc taccatccat ctaatctaat ttgttggtat tgcatataag
      181 gtcatttgat ttgattttat gggcgtcaaa ttttgtgttt aattagaggt ctcgggggtt
      241 tgaaattggt tttgcatctc atcgtttggt ttgaattaga aggataagga tatggtgttt
      301 cttaagttga agaagtttag gaaagcccac aaacaagaca acagtcctcc tgttgttggt
      361 gttcctgatg aagttcccaa gggtaagtcg gtggtggatg ttgataatga taatgagatt
      421 gataacgata atggtgctac tactgcagag gcagaggcag aggaggacga tgatgatttt
      481 atcatgaatg aggtgaagag aaggctgaaa gaacttagaa gaaatagttt tatggttctc
      541 atacctgaag aagaaacatg tcccgaagag gaggatgatg atgttgaaca acaagtggaa
      601 gatcaggaga agaatgatgg tgaatccaat cagtggaggg atgttgaagc agaaggccgt
      661 caattgtggt cttgttttgg ggctttttat gataactact gccaacgcat gctcttcttt
      721 gatcgtctta ctactcagct gctcaaagaa acttgttcat atactccctc cactccttca
      781 ccaaagtctg tgtccaagaa gctcacatcc ccacttggat gtctgtcttt gaaaacaaat
      841 cagaatcagg atcctgaagg tgaaacacaa cacctgcatc aaccagagaa cgatccatat
      901 ctggatcttg agacctcata tgtatcgcaa gtgtgcttga cttgggaggc acttcactgc
      961 cagtacacac aattaagaca cataatcgca tctcagtctg aaaactccaa atgttacaac
     1021 catactgctc agcaattcca gcagtttcag gttctgttgc aacgatttat tgaaaatgaa
     1081 cctttcgagc gtggtctcag gcctcaagtt tatgctcaaa ccagaaattc cttttctaaa
     1141 cttcttcagg ttccaaatat attaggtcaa gagaggaaag agataacaca agaggaatca
     1201 gaaatgatgg tgcatgctcc agatcttatc agaataattg agagctcaat tcttactttt
     1261 caactcttta taaagatgga caagaacaag tcaaatggtg tccggaatct ctttggaggc
     1321 cagaatagca gcaaccagat ggccactcct cttcagcagg ttcaatattc acttgagaag
     1381 aggaaggtga agttgaagga gctgtggaaa aagaggaaag gcgggaaaaa gaaattgtgg
     1441 cctacaacac aagaggaggt ggagttgtta cttgggctta tagatgtgaa ggtgataagc
     1501 agggtgctac ggatggtgaa gcttagcaaa gagcaattgt tttggagtga agaaaagatg
     1561 atgaagctgg atttatcagg aaaactccaa agggatccgt ctcccattct tttcccttgt
     1621 tgatagtcaa atgatgcagg caaggcaagg caggcatggc gtatcaaata gatggcacca
     1681 tattattagt agtaactagc caagtatttt ttctttagta gcattgtaaa tttaacttta
     1741 agagattttg ttatttcatc atctgtgaat tgaaggctta gtagctttat gcagtgacgt
     1801 taatgtttct tttaaaaca
//
LOCUS       XM_071830012            3772 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides topless-related protein
            4-like (LOC139839841), transcript variant X1, mRNA.
ACCESSION   XM_071830012
VERSION     XM_071830012.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3772
                     /gene="LOC139839841"
                     /note="topless-related protein 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839841"
     CDS             111..3530
                     /gene="LOC139839841"
                     /codon_start=1
                     /product="topless-related protein 4-like isoform X1"
                     /protein_id="XP_071686113.1"
                     /db_xref="GeneID:139839841"
                     /translation="MSSLSRELVFLILQFLDEEKFKETVHRLEQESGFFFNVRYFEEM
                     VTNGEWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKKDRAKAVEILVKDLK
                     VFSAFNEDLFKEITQLLTLENFRDNEQLSKYGDTKSARGIMLGELKKLIEANPLFRDK
                     LNFPTLKNSRLRTLINQSLNWQHQLCKNPKPNPDIKTLFVDHSCGQSQPNGARAPSPV
                     NNPLMGAVPKPTGFPPLGAHVPFQPAQAALPTPLAGWMANPSVVPHPSASAGPLGFNP
                     PNNAALLKRPRTPPTNNNLAVDYQTADSEHVLKRTRTFGISEEQVNHLPVNILPVGYS
                     GQSHGQSSYSSDDLPKTVAMALNQGSIVKSMDFHPVQQILLLVGTSTGDIMIWELGSR
                     EKLVHKNFKVWDLSVCSMPVQASLTSDYTASVNRVTWNADGTLFGVAYSKHIVQIYSY
                     HGGDDLRNHLEIEAHVGSVNDIAFSYPNKQLCIVTCGEDKLIKVWDAVTGNKQYTFEG
                     HEAPVYSVCPHYKENIQFIFSTATDGKIKAWLYDNMGSRVDYDAPGHSSTTMAYNADG
                     TRLFSCGTNKEGESYIVEWNESEGAVKRTYNGLGKRSVGVVQFDTTKNRFLAAGDEGL
                     IKFWDMDNVNLLTTVDAESGLPTAPCIRFNKEGILMAVSTNENGIKVLANPDGLRLLR
                     TLENRSFDPSRVASASAVKSSAMSTFGAANASTGLSIMDRPTPIPSMVAMNGDNRNLV
                     DVKPRIGDESMDKSKIWKLTEITEASQCRSLRLPDTSSAMRVTRLIYTNTGLGILALA
                     ANGVHKLWKWTKNERNKIPKATTSIVPIFWQPTSGILMTNVISDANPEESVSCFALSK
                     NDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQI
                     YNVRIDEVKTKLKGHSKRITGLAFSNVLNVLVSSGADSQLCIWSTEGWEKQTNKQLQI
                     PPGRVAAPVVDTRVQFHNDQTHLLAVHETQIAIYEAPKLECLKQWVPPEASGLITHAT
                     YSCDGLSVFVSFEDGSVGILTASTLRLRCRISSATYLPSNPNARVYPVVIAAHPTHIN
                     QFALGLTDGGVIVVEPQESEGKWGTSPPLENGAGPSSITAGATGTTDQAQR"
     misc_feature    120..212
                     /gene="LOC139839841"
                     /note="Lissencephaly type-1-like homology motif; Region:
                     LisH; smart00667"
                     /db_xref="CDD:128913"
     misc_feature    210..386
                     /gene="LOC139839841"
                     /note="C-terminal to LisH motif; Region: CTLH; smart00668"
                     /db_xref="CDD:128914"
     misc_feature    <321..>515
                     /gene="LOC139839841"
                     /note="CTLH/CRA C-terminal to LisH motif domain; Region:
                     CTLH; pfam10607"
                     /db_xref="CDD:402305"
     misc_feature    <735..980
                     /gene="LOC139839841"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    1200..1364
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1368..2123
                     /gene="LOC139839841"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    order(1368..1370,1422..1424,1434..1436,1452..1457,
                     1500..1505,1563..1565,1575..1577,1593..1598,1632..1637,
                     1692..1694,1707..1709,1725..1727,1734..1736,1773..1775,
                     1818..1820,1833..1835,1863..1868,1902..1907,1962..1964,
                     1974..1976,1992..1997,2031..2036,2091..2093,2106..2108)
                     /gene="LOC139839841"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    1383..1502
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1515..1631
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1650..1769
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1782..1901
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1926..2030
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2058..2123
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2412..2627
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <2643..3251
                     /gene="LOC139839841"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    2658..2765
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2907..3023
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    3060..3164
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    3333..3413
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     polyA_site      3772
                     /gene="LOC139839841"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaaaaaaaa aggtacatat atatcatcta tatatatgta caaaccttca gatctgtttc
       61 tgtaatcttt catcatctta ttcaaagttt tttgggaaga aaggaaagct atgtcttccc
      121 ttagtagaga gcttgttttt ttaatacttc agtttttaga tgaagagaaa tttaaggaga
      181 ctgttcacag gttggagcag gagtcagggt ttttctttaa tgttcgttac tttgaggaaa
      241 tggtgacgaa tggcgagtgg gatgaggttg aaaaatatct gtccggattc acgaaagtgg
      301 acgataacag atattcaatg aagatcttct ttgagatacg aaagcagaaa tatctagaag
      361 ctttagataa gaaggatcgt gctaaagctg tcgaaattct agtgaaggac ttaaaggtgt
      421 tttcagcttt taatgaggat cttttcaaag aaatcacaca acttttaact ctggagaatt
      481 tcagagacaa cgagcaatta tcaaagtatg gagacacaaa gtctgcgagg ggtataatgt
      541 tgggtgagct taaaaagctc atcgaagcga atcctctgtt tcgtgataag ctaaacttcc
      601 caactttgaa aaattcgcga ttgcggacac tcatcaatca aagtttaaac tggcaacatc
      661 agctgtgtaa aaacccaaag ccaaatccag acataaagac tttgtttgtt gaccattctt
      721 gtggacagtc acaaccgaat ggtgcaaggg ctccatcccc tgtgaataac ccactaatgg
      781 gtgctgtacc aaagccgaca ggctttcctc cattgggcgc acatgtacct tttcagcctg
      841 cacaagcagc tttgccaaca cctcttgctg gttggatggc aaacccttcc gttgtgcctc
      901 atccatccgc ttctgccggt cctcttggtt tcaatccacc aaataatgct gctttattaa
      961 agcgccccag gactccccca accaacaaca atcttgctgt tgactatcaa actgcagact
     1021 cagaacatgt attaaagaga acaaggacct ttggcatatc ggaggagcag gtcaaccatc
     1081 taccagtaaa tatcttacct gttggttaca gtggtcagag tcatggtcaa agctcatact
     1141 cgtctgatga tttacctaaa actgtggcga tggccctaaa tcagggttca attgtcaaaa
     1201 gcatggattt tcatccagta caacaaattt tgcttcttgt tggaacaagt acgggagata
     1261 tcatgatatg ggaactcggt agtagagaaa aacttgttca taagaatttc aaggtttggg
     1321 atcttagtgt ttgctcaatg cctgtgcagg cctctttgac cagtgactac actgcatccg
     1381 tcaatcgtgt aacttggaat gctgatggaa ccctatttgg tgtcgcatat tcaaagcaca
     1441 ttgtgcaaat ttactcttac catggcggtg atgatctccg aaaccacttg gagattgagg
     1501 cccatgttgg cagtgttaat gatattgcat tttcttaccc aaacaaacaa ctttgcattg
     1561 tgacttgcgg agaagacaaa ttaataaaag tttgggatgc agtaacggga aataagcagt
     1621 atacgtttga aggtcatgaa gcacctgtat attccgtttg tccccattat aaagaaaaca
     1681 ttcagtttat attctcaact gcaaccgatg gaaaaataaa agcatggttg tatgacaata
     1741 tgggttcgag agttgactat gatgcaccag gtcattcatc aactactatg gcatacaatg
     1801 cagacgggac aaggttattt tcatgcggta caaataaaga aggagaatca tacattgtgg
     1861 aatggaatga aagtgaaggg gctgtcaaac gtacatataa tgggcttggg aagcgatctg
     1921 taggagttgt acagtttgac accaccaaaa atcggttcct tgctgctggt gatgagggtt
     1981 tgataaaatt ttgggatatg gataatgtta acttattgac aaccgttgat gctgagagtg
     2041 gtctaccgac tgctccttgc atacgattta acaaggaggg gattctaatg gctgtttcga
     2101 caaatgagaa tggtatcaaa gttttagcga atccagatgg gcttaggcta ctaagaacct
     2161 tagagaatcg ttcttttgac ccctctagag ttgcatccgc atctgcagta aagagctctg
     2221 caatgagtac atttggtgct gcaaatgctt ctactggact aagtattatg gatagaccta
     2281 cacctattcc ctcgatggtt gcaatgaatg gtgacaatcg gaacttggtt gatgttaagc
     2341 cgagaatcgg agatgagtcg atggacaaat caaaaatatg gaagctgacc gaaatcacag
     2401 aagcttcgca gtgtcgctcc ttaaggcttc cggatacatc ttctgcaatg agggttacaa
     2461 ggttaatata cacaaataca ggacttggga tattagctct agcagccaac ggcgtccata
     2521 aattatggaa atggaccaaa aatgagcgga acaaaatccc gaaggctact accagtattg
     2581 tccctatatt ttggcaacca acaagcggca tcttgatgac caatgttatc agtgatgcaa
     2641 accccgaaga atctgtttcg tgctttgcat tgtcaaagaa tgactcttat gtaatgtcgg
     2701 catcaggggg gaagatctct ttgtttaata tgatgacatt taagacaatg actacattca
     2761 tgccacctcc acctgctgca acctttttgg cattccatcc acaagacaat aacattatag
     2821 ccataggcat ggacgattct tctattcaaa tatacaatgt tcgcattgat gaggtcaaaa
     2881 ccaagctaaa aggccatagt aagcggataa ctggcctggc cttctctaat gttctaaatg
     2941 tgctagtgtc ttctggtgct gattcccagt tgtgtatttg gagcacagaa ggatgggaga
     3001 agcaaacaaa taaacagttg caaattccac ctggacgtgt tgctgctcct gtagtggata
     3061 cccgtgtaca gtttcacaat gatcagacac atctgcttgc agtccatgaa actcagatag
     3121 ctatatatga agcacctaaa cttgaatgcc ttaagcagtg ggtccctccg gaagcaagtg
     3181 gtttgatcac acatgctacc tattcgtgcg atggtctatc agtttttgtg agttttgagg
     3241 atggaagtgt tggtattctt actgcatcaa cactcagatt gcgatgccga attagttccg
     3301 ccacatactt gccatccaat ccaaatgcaa gggtgtatcc agttgtgatt gctgctcatc
     3361 cgacacacat caatcaattt gcgttaggac tgactgatgg tggtgtaatt gtagtcgagc
     3421 ctcaagaatc agaagggaaa tggggcactt caccaccgct tgaaaatggt gctggaccaa
     3481 gcagtataac tgcaggtgca actggtacaa ctgatcaagc acagaggtaa ctattaacga
     3541 tgaatgaaag agttgggtac agcagtcggt cagtgtaggc aggcagtgct atcttgatgt
     3601 agtgttattg acttccttta gaatcaagta taggtggtgt aaagcaaatc tttgaagaca
     3661 tcttttcgag aatgttctgt ttcctttatc gttttcgtag ttgagttaat tagtagcata
     3721 tatacagagg tttttatgag tgtttgtcaa ctatttttag ttgttttagt ca
//
LOCUS       XM_071830013            3769 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides topless-related protein
            4-like (LOC139839841), transcript variant X2, mRNA.
ACCESSION   XM_071830013
VERSION     XM_071830013.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3769
                     /gene="LOC139839841"
                     /note="topless-related protein 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139839841"
     CDS             111..3527
                     /gene="LOC139839841"
                     /codon_start=1
                     /product="topless-related protein 4-like isoform X2"
                     /protein_id="XP_071686114.1"
                     /db_xref="GeneID:139839841"
                     /translation="MSSLSRELVFLILQFLDEEKFKETVHRLEQESGFFFNVRYFEEM
                     VTNGEWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKKDRAKAVEILVKDLK
                     VFSAFNEDLFKEITQLLTLENFRDNEQLSKYGDTKSARGIMLGELKKLIEANPLFRDK
                     LNFPTLKNSRLRTLINQSLNWQHQLCKNPKPNPDIKTLFVDHSCGQSQPNGARAPSPV
                     NNPLMGAVPKPTGFPPLGAHVPFQPAQAALPTPLAGWMANPSVVPHPSASAGPLGFNP
                     PNNAALLKRPRTPPTNNNLAVDYQTADSEHVLKRTRTFGISEEVNHLPVNILPVGYSG
                     QSHGQSSYSSDDLPKTVAMALNQGSIVKSMDFHPVQQILLLVGTSTGDIMIWELGSRE
                     KLVHKNFKVWDLSVCSMPVQASLTSDYTASVNRVTWNADGTLFGVAYSKHIVQIYSYH
                     GGDDLRNHLEIEAHVGSVNDIAFSYPNKQLCIVTCGEDKLIKVWDAVTGNKQYTFEGH
                     EAPVYSVCPHYKENIQFIFSTATDGKIKAWLYDNMGSRVDYDAPGHSSTTMAYNADGT
                     RLFSCGTNKEGESYIVEWNESEGAVKRTYNGLGKRSVGVVQFDTTKNRFLAAGDEGLI
                     KFWDMDNVNLLTTVDAESGLPTAPCIRFNKEGILMAVSTNENGIKVLANPDGLRLLRT
                     LENRSFDPSRVASASAVKSSAMSTFGAANASTGLSIMDRPTPIPSMVAMNGDNRNLVD
                     VKPRIGDESMDKSKIWKLTEITEASQCRSLRLPDTSSAMRVTRLIYTNTGLGILALAA
                     NGVHKLWKWTKNERNKIPKATTSIVPIFWQPTSGILMTNVISDANPEESVSCFALSKN
                     DSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIY
                     NVRIDEVKTKLKGHSKRITGLAFSNVLNVLVSSGADSQLCIWSTEGWEKQTNKQLQIP
                     PGRVAAPVVDTRVQFHNDQTHLLAVHETQIAIYEAPKLECLKQWVPPEASGLITHATY
                     SCDGLSVFVSFEDGSVGILTASTLRLRCRISSATYLPSNPNARVYPVVIAAHPTHINQ
                     FALGLTDGGVIVVEPQESEGKWGTSPPLENGAGPSSITAGATGTTDQAQR"
     misc_feature    120..212
                     /gene="LOC139839841"
                     /note="Lissencephaly type-1-like homology motif; Region:
                     LisH; smart00667"
                     /db_xref="CDD:128913"
     misc_feature    210..386
                     /gene="LOC139839841"
                     /note="C-terminal to LisH motif; Region: CTLH; smart00668"
                     /db_xref="CDD:128914"
     misc_feature    <321..>515
                     /gene="LOC139839841"
                     /note="CTLH/CRA C-terminal to LisH motif domain; Region:
                     CTLH; pfam10607"
                     /db_xref="CDD:402305"
     misc_feature    <735..980
                     /gene="LOC139839841"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    1197..1361
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1365..2120
                     /gene="LOC139839841"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    order(1365..1367,1419..1421,1431..1433,1449..1454,
                     1497..1502,1560..1562,1572..1574,1590..1595,1629..1634,
                     1689..1691,1704..1706,1722..1724,1731..1733,1770..1772,
                     1815..1817,1830..1832,1860..1865,1899..1904,1959..1961,
                     1971..1973,1989..1994,2028..2033,2088..2090,2103..2105)
                     /gene="LOC139839841"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    1380..1499
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1512..1628
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1647..1766
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1779..1898
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1923..2027
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2055..2120
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2409..2624
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <2640..3248
                     /gene="LOC139839841"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    2655..2762
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2904..3020
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    3057..3161
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    3330..3410
                     /gene="LOC139839841"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     polyA_site      3769
                     /gene="LOC139839841"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaaaaaaaa aggtacatat atatcatcta tatatatgta caaaccttca gatctgtttc
       61 tgtaatcttt catcatctta ttcaaagttt tttgggaaga aaggaaagct atgtcttccc
      121 ttagtagaga gcttgttttt ttaatacttc agtttttaga tgaagagaaa tttaaggaga
      181 ctgttcacag gttggagcag gagtcagggt ttttctttaa tgttcgttac tttgaggaaa
      241 tggtgacgaa tggcgagtgg gatgaggttg aaaaatatct gtccggattc acgaaagtgg
      301 acgataacag atattcaatg aagatcttct ttgagatacg aaagcagaaa tatctagaag
      361 ctttagataa gaaggatcgt gctaaagctg tcgaaattct agtgaaggac ttaaaggtgt
      421 tttcagcttt taatgaggat cttttcaaag aaatcacaca acttttaact ctggagaatt
      481 tcagagacaa cgagcaatta tcaaagtatg gagacacaaa gtctgcgagg ggtataatgt
      541 tgggtgagct taaaaagctc atcgaagcga atcctctgtt tcgtgataag ctaaacttcc
      601 caactttgaa aaattcgcga ttgcggacac tcatcaatca aagtttaaac tggcaacatc
      661 agctgtgtaa aaacccaaag ccaaatccag acataaagac tttgtttgtt gaccattctt
      721 gtggacagtc acaaccgaat ggtgcaaggg ctccatcccc tgtgaataac ccactaatgg
      781 gtgctgtacc aaagccgaca ggctttcctc cattgggcgc acatgtacct tttcagcctg
      841 cacaagcagc tttgccaaca cctcttgctg gttggatggc aaacccttcc gttgtgcctc
      901 atccatccgc ttctgccggt cctcttggtt tcaatccacc aaataatgct gctttattaa
      961 agcgccccag gactccccca accaacaaca atcttgctgt tgactatcaa actgcagact
     1021 cagaacatgt attaaagaga acaaggacct ttggcatatc ggaggaggtc aaccatctac
     1081 cagtaaatat cttacctgtt ggttacagtg gtcagagtca tggtcaaagc tcatactcgt
     1141 ctgatgattt acctaaaact gtggcgatgg ccctaaatca gggttcaatt gtcaaaagca
     1201 tggattttca tccagtacaa caaattttgc ttcttgttgg aacaagtacg ggagatatca
     1261 tgatatggga actcggtagt agagaaaaac ttgttcataa gaatttcaag gtttgggatc
     1321 ttagtgtttg ctcaatgcct gtgcaggcct ctttgaccag tgactacact gcatccgtca
     1381 atcgtgtaac ttggaatgct gatggaaccc tatttggtgt cgcatattca aagcacattg
     1441 tgcaaattta ctcttaccat ggcggtgatg atctccgaaa ccacttggag attgaggccc
     1501 atgttggcag tgttaatgat attgcatttt cttacccaaa caaacaactt tgcattgtga
     1561 cttgcggaga agacaaatta ataaaagttt gggatgcagt aacgggaaat aagcagtata
     1621 cgtttgaagg tcatgaagca cctgtatatt ccgtttgtcc ccattataaa gaaaacattc
     1681 agtttatatt ctcaactgca accgatggaa aaataaaagc atggttgtat gacaatatgg
     1741 gttcgagagt tgactatgat gcaccaggtc attcatcaac tactatggca tacaatgcag
     1801 acgggacaag gttattttca tgcggtacaa ataaagaagg agaatcatac attgtggaat
     1861 ggaatgaaag tgaaggggct gtcaaacgta catataatgg gcttgggaag cgatctgtag
     1921 gagttgtaca gtttgacacc accaaaaatc ggttccttgc tgctggtgat gagggtttga
     1981 taaaattttg ggatatggat aatgttaact tattgacaac cgttgatgct gagagtggtc
     2041 taccgactgc tccttgcata cgatttaaca aggaggggat tctaatggct gtttcgacaa
     2101 atgagaatgg tatcaaagtt ttagcgaatc cagatgggct taggctacta agaaccttag
     2161 agaatcgttc ttttgacccc tctagagttg catccgcatc tgcagtaaag agctctgcaa
     2221 tgagtacatt tggtgctgca aatgcttcta ctggactaag tattatggat agacctacac
     2281 ctattccctc gatggttgca atgaatggtg acaatcggaa cttggttgat gttaagccga
     2341 gaatcggaga tgagtcgatg gacaaatcaa aaatatggaa gctgaccgaa atcacagaag
     2401 cttcgcagtg tcgctcctta aggcttccgg atacatcttc tgcaatgagg gttacaaggt
     2461 taatatacac aaatacagga cttgggatat tagctctagc agccaacggc gtccataaat
     2521 tatggaaatg gaccaaaaat gagcggaaca aaatcccgaa ggctactacc agtattgtcc
     2581 ctatattttg gcaaccaaca agcggcatct tgatgaccaa tgttatcagt gatgcaaacc
     2641 ccgaagaatc tgtttcgtgc tttgcattgt caaagaatga ctcttatgta atgtcggcat
     2701 caggggggaa gatctctttg tttaatatga tgacatttaa gacaatgact acattcatgc
     2761 cacctccacc tgctgcaacc tttttggcat tccatccaca agacaataac attatagcca
     2821 taggcatgga cgattcttct attcaaatat acaatgttcg cattgatgag gtcaaaacca
     2881 agctaaaagg ccatagtaag cggataactg gcctggcctt ctctaatgtt ctaaatgtgc
     2941 tagtgtcttc tggtgctgat tcccagttgt gtatttggag cacagaagga tgggagaagc
     3001 aaacaaataa acagttgcaa attccacctg gacgtgttgc tgctcctgta gtggataccc
     3061 gtgtacagtt tcacaatgat cagacacatc tgcttgcagt ccatgaaact cagatagcta
     3121 tatatgaagc acctaaactt gaatgcctta agcagtgggt ccctccggaa gcaagtggtt
     3181 tgatcacaca tgctacctat tcgtgcgatg gtctatcagt ttttgtgagt tttgaggatg
     3241 gaagtgttgg tattcttact gcatcaacac tcagattgcg atgccgaatt agttccgcca
     3301 catacttgcc atccaatcca aatgcaaggg tgtatccagt tgtgattgct gctcatccga
     3361 cacacatcaa tcaatttgcg ttaggactga ctgatggtgg tgtaattgta gtcgagcctc
     3421 aagaatcaga agggaaatgg ggcacttcac caccgcttga aaatggtgct ggaccaagca
     3481 gtataactgc aggtgcaact ggtacaactg atcaagcaca gaggtaacta ttaacgatga
     3541 atgaaagagt tgggtacagc agtcggtcag tgtaggcagg cagtgctatc ttgatgtagt
     3601 gttattgact tcctttagaa tcaagtatag gtggtgtaaa gcaaatcttt gaagacatct
     3661 tttcgagaat gttctgtttc ctttatcgtt ttcgtagttg agttaattag tagcatatat
     3721 acagaggttt ttatgagtgt ttgtcaacta tttttagttg ttttagtca
//
LOCUS       XM_071830014            2542 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable GTP diphosphokinase
            RSH2, chloroplastic (LOC139839842), mRNA.
ACCESSION   XM_071830014
VERSION     XM_071830014.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2542
                     /gene="LOC139839842"
                     /note="probable GTP diphosphokinase RSH2, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins"
                     /db_xref="GeneID:139839842"
     CDS             277..2364
                     /gene="LOC139839842"
                     /codon_start=1
                     /product="probable GTP diphosphokinase RSH2,
                     chloroplastic"
                     /protein_id="XP_071686115.1"
                     /db_xref="GeneID:139839842"
                     /translation="MAVPTIALYASHPGGVYDFDLSGRSSSPATVSSSKQTVGGLSSL
                     FSSSSSYPGNGSEELPSIRTGEDLNLSSSLSYSPFGSYMKRDHVHQSPVSVFQGPVSS
                     SPVRFSPERDGFRRKGGFVTHVLSSCVEYESRSSHVPNNNNNNNNNNFSEEELTFMMD
                     DTCLNDSDPEPYVKELLLKAQQNHKVFNDSLVIKAFYEAEKAHRGQMRASGDPYLQHC
                     VETAILLASIGANATVVAAGLLHDTIDDSFISYDYILQTFGAGVADLVEGVSKLSYLS
                     KLARESNTANRTMEADRLHTMFLAMTDARAVLIKLADRLHNMMTLEALPLSKKQRFAK
                     ETMEVFAPLANRLGITSWKEQLENLCFKYLYPEQHNDLSSQLLKLFDEAMITCAAEKL
                     EQSLQEEAISYHVLYGRDKSLYSIHCKMLKKKLAMDEIHDIHGLRLIVENEEDCYKAL
                     QLVHRLWAEVPGKFKDYIKRPKCNGYQSLHTVVMGEGSVPLEVQIRTLSMHSQAEFGF
                     AAHWRYKEGDCKHPSFVLQMVEWARWVVTWQCENMGLNKSCIGFNEAFKPPCTFPFHS
                     EDCPHSYKPCCGSDGPVFVIMIENDKMSVQEFPANSTVKDVVNKAGGEGNSRYSPYGY
                     SVKEELRPRVNHEAVRDVNYKLKMGDVVELTPRIPDKSLTEYREEIQRMYDRGVSVTN
                     SSRKQTAGVGWGR"
     misc_feature    772..>1893
                     /gene="LOC139839842"
                     /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal
                     transduction mechanisms, Transcription]; Region: SpoT;
                     COG0317"
                     /db_xref="CDD:440086"
     polyA_site      2542
                     /gene="LOC139839842"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatatcatac tcctccgcgt atcattccat cttacgacaa aaaaagcata ggaaagaaga
       61 aaccacaact ttctcttcct tccaaattca atctcatatg tatctttctt tatgtatata
      121 cacacatacc cctacttttg aattttgatt ctctctaatc tttaatcact ttcttttctt
      181 caattctact caagccataa ttgtctactt caagaatcaa aacctagggt ttcataattt
      241 tctcaaattt cacaaattct tcgttcttaa ttaattatgg cggttccgac gattgcactc
      301 tacgcaagtc atcccggagg ggtatacgat ttcgatttga gcggccgttc gtcgtctccc
      361 gccaccgttt cgtcatcaaa acagactgtc ggaggtcttt catcgctatt ttcatcgtct
      421 tcgagctatc ccggtaacgg atctgaagaa ttgccgtcga tacgaaccgg tgaagatctg
      481 aatctaagca gttctctttc gtattcgccg ttcggatcgt atatgaaaag agatcatgtt
      541 catcagagtc cggtttcggt gtttcagggt ccggtttcgt cgtctccggt gaggttttcg
      601 ccggaacgag atggatttcg ccggaaagga ggttttgtta cgcacgtgtt aagctcgtgt
      661 gtggaatatg aatcacggag ctcgcacgtg ccaaataata ataataataa taataataat
      721 aattttagtg aggaggaact tacatttatg atggatgata cctgcttgaa tgattcagat
      781 cccgaacctt atgttaaaga gttattatta aaagcacagc agaaccacaa ggtttttaac
      841 gatagtttgg taattaaagc tttttatgaa gctgaaaagg ctcacagagg gcagatgcga
      901 gcaagtggtg atccatattt acaacattgt gtggaaactg caattttgct ggcttcaata
      961 ggtgctaacg caacggtagt tgctgcaggg ctattacatg acacaattga tgattctttt
     1021 ataagctatg actatattct ccaaactttt ggagctggag ttgctgatct tgttgaaggg
     1081 gtgtctaagt taagctattt gagcaagcta gcccgtgaaa gcaatacagc aaatagaaca
     1141 atggaagcag atcgtttgca tacaatgttt cttgcgatga cagatgccag ggcagtgctc
     1201 attaagttgg ctgataggct gcacaacatg atgactttgg aagcgctgcc tttgagtaag
     1261 aaacagaggt ttgcaaagga gacgatggag gtatttgctc cacttgcaaa ccgtttagga
     1321 atcacaagtt ggaaggagca attggaaaat ctctgcttca agtacctata tcccgagcag
     1381 cataatgatc tatcttctca acttctgaaa ttatttgatg aggcaatgat tacatgtgct
     1441 gctgaaaaat tggagcaatc tctccaagaa gaagcaattt cttaccatgt tttgtatgga
     1501 cgggacaaaa gcttgtatag catccactgc aaaatgctaa aaaaaaagct ggccatggat
     1561 gaaattcatg atattcatgg tctacgtctc attgttgaaa atgaagagga ctgctacaaa
     1621 gcgttacaac ttgttcaccg attatgggct gaagtacctg gaaagttcaa agattacata
     1681 aaacgcccaa agtgtaatgg gtatcagtct ttgcacacag tagtaatggg agagggatcg
     1741 gtgccacttg aagtccagat cagaacatta tcaatgcact cgcaggctga gtttggattt
     1801 gctgctcatt ggagatacaa agaaggagac tgtaagcacc cttcttttgt gctccagatg
     1861 gttgaatggg ctcgttgggt cgtcacttgg caatgtgaga atatgggcct aaacaagtca
     1921 tgcattggct tcaacgaagc ctttaagcct ccttgcactt ttccttttca ttctgaagat
     1981 tgcccacatt cgtataaacc ctgttgtgga tctgacgggc ctgtttttgt catcatgatt
     2041 gagaacgaca agatgtcggt tcaagagttc ccggcaaatt caacagtgaa ggatgttgta
     2101 aacaaagcag gaggtgaggg gaactctagg tactctccgt atgggtattc agtgaaggaa
     2161 gagctgaggc cacgggtgaa ccatgaggcg gtgagggatg ttaattacaa gctcaaaatg
     2221 ggggatgtgg tggagctaac accaaggata ccagacaagt ccttaacgga atacagggaa
     2281 gagattcagc gcatgtatga cagaggtgtg tcggtaacaa attccagcag gaagcagact
     2341 gctggtgttg ggtggggaag atagataggt tcaaaatgat gctgctcttt gatttattat
     2401 ggtaagttga aattgtatta tgtaagaata tatgtatata tgtatatgta tttaggtgta
     2461 gtaggttgat aaggattgaa ttatttcttg taaatatata ttttttgttg ttaaaggcaa
     2521 tgtatgtacg tatgttctgc ca
//
LOCUS       XR_011757096             289 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839843), ncRNA.
ACCESSION   XR_011757096
VERSION     XR_011757096.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..289
                     /gene="LOC139839843"
                     /note="uncharacterized LOC139839843; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839843"
     ncRNA           1..289
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839843"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839843"
ORIGIN      
        1 tctctctgct ctcttcttcc atctccatga gtccttcaaa tcctaaaatg gcagccgctt
       61 cattaaactt tatccctatt caaacgaatc ctcaacacct tttttcttta tcctttcaga
      121 atctcttctt tccgtgtttt ttttctagct ttggttcatc tcatgaaact atgtaaaaga
      181 ttattttgga cttttggtta tgattttatt ttgcctcaga tgcttctaat aaagccttta
      241 acttcagttt tggaagacca ggttctaact tcaattacga gtatttgct
//
LOCUS       XM_071830016            3364 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839844), mRNA.
ACCESSION   XM_071830016
VERSION     XM_071830016.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3364
                     /gene="LOC139839844"
                     /note="uncharacterized LOC139839844; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139839844"
     CDS             24..3095
                     /gene="LOC139839844"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686117.1"
                     /db_xref="GeneID:139839844"
                     /translation="MTWFRSGSSIAKLAIRRTVTQSGSYASRTRVFPSESRCFHTTVF
                     KSKAQSAPVPRAVPLSRLTDSFLDGTSSVYLEELQRAWENDPNSVDESWDNFFKNFVG
                     QAATSPGISGQTIQESMRLLLLVRAYQVYGHMKAKIDPLGLEKREIPADLDPAFYGFS
                     EADLDREFFLGVWRMSGFLSENRPVQTLRSILTRLEQAYSGNIGYEYMHIADRERCNW
                     LRDRIETPTPTQYNSERREVILDRLIWSTQFENFLATKWTAAKRFGLEGGETLIPGMK
                     EMFDRSADLGVESIVIGMSHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGT
                     GDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSNDTDRTKN
                     MGILIHGDGSFAGQGVVYETLHLSGLPNYTTGGTIHIVVNNQVAFTTDPQAGRSSQYC
                     TDVAKALNAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDIVCYRRFGHNEIDEP
                     SFTQPKMYKIIRNHPSSLELYQKKLLETGQATKEDIDRIQSKVTAILNEEFLASKDYV
                     PQRRDWLSAYWTGFKSPEQLSRIRNTGVKPEILKNVGKAITTLPETFKPHRAVKKIFA
                     DRFKMIETGEGVDWAVAEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVVHDQETGE
                     RYCPLDHVMMNQNEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFSNGA
                     QVIFDQFLSSGEAKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMTDDNPFVIPEM
                     EPTLRNQIQTCNMQIVNVTTPANYFHVLRRQLHREFRKPLVVMSPKNLLRHKECKSNL
                     SEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVLCSGKVYYELDEKRKSIE
                     GKDIAICRVEQLCPFPYDLIQRELKRYPNAEVVWCQEEPMNMGAYSYIAPRLATAMKA
                     LDRGTIDDVKYVGRAPSAATATGFYSVHVREQAELVQKALQPEPVINPDLC"
     misc_feature    216..3059
                     /gene="LOC139839844"
                     /note="2-oxoglutarate dehydrogenase complex, dehydrogenase
                     (E1) component, and related enzymes [Energy production and
                     conversion]; Region: SucA; COG0567"
                     /db_xref="CDD:440333"
     polyA_site      3364
                     /gene="LOC139839844"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agaggatttg aaatttgtaa aagatgacgt ggtttaggtc aggatctagt attgcaaagc
       61 ttgcaatcag gagaaccgta acgcaaagtg gatcatatgc atcaaggacg cgtgtatttc
      121 cgtctgaaag ccgatgtttt catacaacag tcttcaagtc taaagcacaa tctgcacctg
      181 ttcctcgagc ggtcccactt tctcgtttga ctgatagctt tttagatgga actagtagtg
      241 tctacctcga agagcttcaa agagcttggg agaatgatcc aaacagtgtt gatgagtcat
      301 gggacaattt tttcaagaac tttgttggtc aagctgctac atcccctgga atatcgggtc
      361 aaaccataca agagagcatg cgattgttgt tgcttgttag agcatatcaa gtttatggtc
      421 acatgaaagc taaaattgat cctttgggtc tggaaaaaag agagattcct gctgatttag
      481 atcccgcttt ttacgggttc agcgaagctg atttggatcg tgagtttttt ctaggtgtat
      541 ggaggatgtc tgggtttttg tctgagaatc gacctgtgca aacacttagg tctatattga
      601 cccgtctgga acaagcttat tctggaaata ttggttatga gtacatgcac attgctgatc
      661 gtgaaagatg taattggttg agagatagaa tcgagactcc aaccccgact cagtataata
      721 gtgagcgccg tgaggtcatc cttgatagac tcatatggag tactcagttt gagaattttt
      781 tagctacaaa atggacggct gctaaaagat ttggacttga aggcggggaa actttaatcc
      841 caggcatgaa agagatgttt gaccggtcag cagatctcgg cgttgaaagc attgttattg
      901 gaatgtctca cagaggaaga ttaaacgtct taggtaacgt tgttaggaag ccgttaaggc
      961 aaattttcag tgaattcagt ggtggtacga agccagttga cgaagttggg ctctacactg
     1021 gaactggtga tgtaaagtat catttaggaa catcgtatga ccgcccgaca cgaggaggaa
     1081 aacgaatcca tttgtctttg gttgcaaacc cgagtcattt agaagctgtt gacccggtcg
     1141 tggtcgggaa aactagggca aaacagtatt actcgaacga tacagatagg acgaaaaaca
     1201 tgggtatttt gattcacggg gacggaagtt ttgcgggtca aggtgtggtt tatgagactt
     1261 tgcatttaag tggtcttcca aattacacca ctggtgggac cattcatatt gtagtgaaca
     1321 atcaagttgc ttttactact gatccacaag caggaagatc ttcacagtat tgtacggatg
     1381 ttgctaaagc tttaaatgct cccatctttc atgtgaatgg tgatgatgta gaagcagttg
     1441 tccatgcgtg tgagcttgca gcagaatggc gacagacgtt ccattcagat gttgttgttg
     1501 acattgtctg ttatcgaaga tttgggcata atgaaattga tgaaccttcg tttactcaac
     1561 ccaaaatgta caagatcatc aggaatcatc cttcatcgtt agaactctac cagaagaagc
     1621 ttctagaaac tggccaggca actaaagaag atattgatag aatacaaagc aaggttactg
     1681 caatcctcaa tgaagaattc cttgctagca aggattatgt ccctcaaaga agagactggc
     1741 tttcagctta ctggaccgga ttcaagtctc ctgaacagct ttcacgtatt cgtaacactg
     1801 gggtgaaacc agagatcttg aaaaatgttg ggaaggcaat cacaactctt cctgaaactt
     1861 tcaagcctca tagagctgtt aagaagatat ttgcagatcg ttttaagatg atcgagactg
     1921 gtgagggtgt tgactgggca gttgcagaag cccttgcgtt tgcaacattg ttggtggaag
     1981 gaaaccatgt gagattgagt ggtcaagatg ttgaaagagg tactttcagt catagacatt
     2041 ctgttgttca tgaccaggaa acaggggaac gttactgtcc gttggatcat gtaatgatga
     2101 atcaaaatga ggaaatgttt actgtaagca acagttcgct ttcagaattt ggcgtcctgg
     2161 gatttgagtt gggatactca atggaaaacc ctaattcgct tgtattgtgg gaagctcaat
     2221 ttggggattt ttcaaatgga gctcaggtga tatttgacca gtttttgagc agtggagagg
     2281 ctaaatggct gcgccagaca ggactagttg tgttactacc tcatggttat gatggtcagg
     2341 gccccgaaca ctcaagtgca agactagagc gtttccttca gatgactgat gataatccgt
     2401 ttgttatacc tgagatggaa ccaactcttc gcaaccaaat tcagacctgc aatatgcaga
     2461 ttgtcaatgt tacaacacct gcaaattatt tccatgtgtt gcgtcgacag ttgcataggg
     2521 agttccgtaa gccgcttgtt gtaatgtctc ctaagaattt gctccgtcac aaagagtgca
     2581 agtcaaattt atcggagttt gatgatgtcc aaggtcaccc aggttttgac aaacaaggga
     2641 ctagattcaa gcgactcatc aaggatcaga atgaccactc agatcttgaa gagggcatta
     2701 gacgtttagt tctttgctct ggaaaggttt actacgaact tgatgagaag aggaagtcaa
     2761 ttgagggtaa agacattgca atttgccgcg ttgaacaact ctgtccattc ccctatgatc
     2821 tcattcaacg tgaactaaag cgttatccaa atgcagaagt tgtgtggtgc caggaggagc
     2881 caatgaatat gggggcctac agttacattg ccccacgcct tgctaccgcc atgaaggcgc
     2941 tcgatagagg tactatagat gatgtcaaat acgtgggccg ggctccatct gctgccactg
     3001 caactggttt ctacagcgtt cacgtgagag aacaggcaga actcgtgcag aaagccctgc
     3061 agccagaacc tgtcattaac cctgatcttt gttagagcct gtatcctggg gttttcacca
     3121 tagtcggagt gtcggggtgg catccttttg ctttaattta aatcgggcaa tcgagtattg
     3181 gcaacattcg tgtggaataa taacgtaaaa atgttgatat acgttgtgcc atgggttcat
     3241 ggcatgtaac tattacagtt ttattactat attttttgag ggatgacttg tttggtaatc
     3301 atgatgatca tatcagaata caatccgaga ttattttggt tcaagttatg ttatatttac
     3361 tcta
//
LOCUS       XM_071830017            3180 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lipoxygenase 1,
            chloroplastic-like (LOC139839845), mRNA.
ACCESSION   XM_071830017
VERSION     XM_071830017.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3180
                     /gene="LOC139839845"
                     /note="lipoxygenase 1, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139839845"
     CDS             97..2847
                     /gene="LOC139839845"
                     /codon_start=1
                     /product="lipoxygenase 1, chloroplastic-like"
                     /protein_id="XP_071686118.1"
                     /db_xref="GeneID:139839845"
                     /translation="MALAKEFMGRSVIEKPSFLPSHILLNSINHNHHNQFSVNPNIRS
                     NSGRIKKTVRVPLLVKAAISEDLANKLVKPEKAVTFNVRAVLTVRNKYQEDFKETLVK
                     KIDALTDQIGRNVALELYSNDIDPKTRAPKKSKEAVLKDWSKKSNLKSEKVNYTSDIL
                     VDSDFGIPGAITISNKHQQEFYLESITIEGFACGPVYFPCNSWVQSTNDHPHPRIFFS
                     NQPYLPDETPAGLKLLREKELQLLRGDGKGVRKLSDRVYDYDVYNDLGNPDRGTDFIR
                     PSLGGPKIPYPRRCRTGRLPTDTDILAESRVEKPFPLYVPRDEQFDESKQNTFSTSRL
                     KAVLHNLLPSMVANISKKHDFKGFSQIESLYSEGVQLKLGLQDDVIKKLRLPNLVTRL
                     HESSQGGGLLKYNTPKILSKDRFSWLRDDEFARQSLAGVNPINIEKLKVFPPVSQLEP
                     EIYGPQESALKEEHISGYLNGMTVQQAIEEDKLFIIDYHDIYLPFLDRINALDGRKTY
                     ATRTVFFLNPSGTLKPIAIELSLPRALPGSQCKRVVTPPIDATSNWTWQLAKAHVCSN
                     DAGVHQLSNHWLRTHATMEPFILSAHRQLSAMHPIYKLLDPHMRYTLEINAVARQNLI
                     NADGVIEQGFTPGRYCMEISAAAYKQWRFDLEGLPADLIRRGMAVRDPSQRHGLKLLI
                     EDYPYACDGLLIWEAIQNWVHTYVSRYYPDPSHVCNDRELQAWYAESINVGHADLRHE
                     NWWPTLSNADDLTGILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDP
                     EYASFLEDPQKYFLSALPSLLQSTKYMAVVDTLSTHSPDEEYIGERQQPDTWSGDAEM
                     VEAFYGFSTEIQRIEKEIERRNRDRRLKNRCGAGVLPYELLAPSSQPGVTCRGVPNSV
                     SI"
     misc_feature    97..2844
                     /gene="LOC139839845"
                     /note="lipoxygenase; Region: PLN02264"
                     /db_xref="CDD:215148"
     polyA_site      3180
                     /gene="LOC139839845"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctttctatac ttatagtact tatttatatt tatttattca atttatacat tccaactcca
       61 tttccactgt acaccctctc ctcccccgaa taaaaaatgg ctcttgctaa agaattcatg
      121 ggtcgttctg tcattgaaaa accttcattt cttccttcac acattcttct taattccatc
      181 aaccataacc accacaatca gttttctgta aacccaaaca tcaggtcaaa ctccggtcga
      241 atcaagaaaa ctgttagggt tcctcttttg gtgaaggcgg cgatcagtga agatttagct
      301 aataaacttg tgaaaccaga aaaagctgtt acctttaatg ttagagctgt gttgactgta
      361 cggaacaaat atcaagaaga cttcaaagaa acacttgtta aaaaaattga tgctctgact
      421 gatcagattg gaagaaatgt tgctcttgag ctttatagca atgatattga tccaaaaacc
      481 agggcaccaa agaaaagcaa agaagctgtg ttgaaggact ggtcaaaaaa gtcaaatcta
      541 aaatctgaaa aggtgaatta tacatctgat atattggtgg actcagattt tgggattcca
      601 ggagcaatta ctataagtaa caagcatcaa caagagtttt atttggagag tatcactatt
      661 gaaggttttg cttgtggtcc tgtttatttt ccttgcaatt cttgggttca atccactaat
      721 gatcatcctc atcccaggat tttcttctct aatcagccat atcttcctga tgagactcca
      781 gcggggctta aattactaag agagaaagaa ttacaacttt taagaggtga cggaaaagga
      841 gtgaggaagt tatcagacag agtttatgat tatgacgttt acaacgatct tggaaaccct
      901 gacagaggaa ccgacttcat tagaccctct ttaggaggtc caaaaatccc gtatccaagg
      961 cggtgccgca ctggccgctt acctactgac accgatatat tagccgagag tcgagtggag
     1021 aagcctttcc ctttgtatgt tccaagagat gagcaattcg acgagtcaaa acaaaatacg
     1081 ttctcaacaa gtcggcttaa ggcagtgcta cataatcttt tgccctcaat ggtggccaac
     1141 atatccaaaa aacacgactt taaaggattc tcgcagattg aaagtctgta cagtgaagga
     1201 gtgcagctga aactaggtct tcaagatgat gttataaaga aacttcggtt gccaaatctt
     1261 gtgaccaggc tccacgagtc tagtcagggt ggtggtcttc tcaaatacaa tacccccaag
     1321 attctttcaa aggacaggtt ctcatggtta cgtgatgatg aatttgctcg ccaatcgctc
     1381 gcgggagtca accctatcaa catcgagaaa cttaaagttt ttccgccagt gagtcaactc
     1441 gaacctgaaa tctatggccc acaagagtcc gccctcaagg aagaacacat atcgggttat
     1501 cttaatggca tgactgtaca gcaggctatt gaggaagata agctcttcat aattgactac
     1561 catgacatat acctaccttt tctggaccgt ataaatgcac ttgatgggcg taaaacgtac
     1621 gcaacgcgta cagtcttttt cttgaaccca tcaggcacac ttaagcccat tgcaatcgag
     1681 cttagcttac cacgtgctct acctggctca cagtgtaaac gtgtggtcac acctccaata
     1741 gacgccacta gcaactggac gtggcaactg gccaaagctc atgtctgctc taatgatgcc
     1801 ggtgttcacc agctttcaaa ccactggtta cgaacacatg caactatgga accatttata
     1861 ctgtctgcac ataggcaatt gagtgctatg cacccgatat ataagctctt ggacccacat
     1921 atgagataca cgctggagat caatgccgtg gcccgccaga acctgatcaa tgccgatggg
     1981 gtcatagagc aaggttttac tcctggacgc tactgcatgg agataagtgc tgctgcgtac
     2041 aagcagtggc ggttcgattt ggaagggctt ccagctgatc tcatcagaag gggtatggcg
     2101 gttcgagacc caagtcaacg acatggtcta aagcttctca ttgaagacta cccatatgct
     2161 tgtgatgggc tcttgatctg ggaagccata caaaactggg ttcatacgta tgtaagccga
     2221 tattaccccg acccatcaca tgtctgcaat gaccgagagc tccaagcctg gtacgccgag
     2281 tcaatcaatg tgggccatgc tgatctccgc cacgagaatt ggtggcccac attgtccaat
     2341 gccgatgacc tcactggcat cttgaccacc ttaatctggc tagcgtcagc ccaacatgcg
     2401 gcccttaact tcggtcaata cccatatggt ggttacgtac cgaaccgacc tccgttaatg
     2461 cggcgtttgg ttccggatga aaacgatcct gaatacgcga gcttccttga ggacccacaa
     2521 aaatacttct tatcagcatt accaagtttg ttgcaatcga caaagtacat ggcggtggtg
     2581 gatacattgt ctactcactc accggatgaa gagtatatcg gtgagagaca acaacccgac
     2641 acttggtctg gtgatgcaga aatggtcgaa gcattttacg ggttttcgac agagattcag
     2701 aggatagaga aggagattga gagaaggaat cgggacaggc gtttaaagaa tcgatgtggg
     2761 gctggagttt tgccatatga acttcttgca cctagttcac agcccggtgt aacttgcaga
     2821 ggtgttccaa acagtgtatc gatttgaaca cttttacgca ctctgtgtta tcgaccccgt
     2881 atgtaagtta attactgtat tatctaatga attagttata taggtgtaaa gtagaatgct
     2941 ctaaatgaat gtaagggggt gctctttgta taaaacttag ggataaaata agttaacctg
     3001 gttaggtttc ttccaggatc atttcgggtt tgacttcaaa ggtcaaacaa cagccttctg
     3061 tctggtgtcg tgtagtgtta gttggggtca ggttgtatgt atgtttgttg tgcataacgc
     3121 acaagtggga ttagatattt caccaataat aaaacgtgat atgatcgatg ttgtgttcaa
//
LOCUS       XM_071830018            6064 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear pore complex protein
            NUP205 (LOC139839846), transcript variant X1, mRNA.
ACCESSION   XM_071830018
VERSION     XM_071830018.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6064
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..6064
                     /gene="LOC139839846"
                     /note="nuclear pore complex protein NUP205; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839846"
     CDS             97..5682
                     /gene="LOC139839846"
                     /codon_start=1
                     /product="nuclear pore complex protein NUP205 isoform X1"
                     /protein_id="XP_071686119.1"
                     /db_xref="GeneID:139839846"
                     /translation="MVSAKQLLSTIESTLLGSTPPSPSEKIQLIHTIRQSLPSLRSLL
                     SFPPPKPSDRAQVQSKEVRLPDSGPIPLDDQDVQIALKLSDDLHLNEIDSVRLLVSAN
                     QEWGLLGRGPLDIVRLAAGLWYTERRDLITALYTLLRAVVLDQGLEADVQGDILRYTE
                     DLISSGLRQRLISLIKELNREEPAGLGGPSSERYILDSRGALVERRAVVCRERLILGH
                     CLVLSLLVVRASPKDVKDIFTTLKDSAGDISGSTDIVKNQITYSLLFSLTISLISDAL
                     SASPDKMSILSQDASFKHDFHETVMAIGNDQRIEGCMNCVRLAWAVHLMIIQDVTDVR
                     ETINDTRNINSCLEVIFSSNVFQFLLNTVLRTPAYQNDDEDMIYMYNAYLHKLITSFL
                     SHPLARDKVKETKEKAMVALSPYKMSGSHDHALDNQQAAESAPQTFVSLLEFVSEIYE
                     KEPELLSGNDVIWTFVKFAGEDHTNFQTLVAFLKMLSTLASSEEGASTVYELLQGRTF
                     RSISWNTLFDCLSIYEDKFKQSSQSTGTILPEIQEGDAKALVAYLCVLRKVVENGNPI
                     ERKTWFPDIEPLFKLLSYENVPPYLKGALRNSILTFIHVFPNSKDTIWGFLEQYDLPV
                     VVGPQVGQTTGSQVYDMRFELNEVEARSDHYPSTISFLNLLNALIAEERDTTDRGRRF
                     IGIFRFIYDHVFGPFSQRAYADPSEKWQLGVACLQHFQMILSMYDIKDEDKDIVVGHS
                     QLVASQSTPLQMQLPVIELLRDFMSGKTVFRNIMGILLPGVDAIIAERTNQTYGLLLE
                     KAVLLSLEIIILVLEKDLSVAEFWCPLYQPFDVILSQDHNQIVALLEYIRYDFHPQIQ
                     QRSIKIMSILSSRMVGLVPLLLKSSSVGLLIEDYAACLEQRSEGCQIIENTSDDSGVL
                     IMQLLIDNVNRPAPNVTHFLLRFDLDSPVERTVLQPKFNYSCLKVILDILESLPKPDI
                     NSMLHEFGFQLLYELCSDSLTSGPTIDLLSTRKYQFFVKHLDNIGVAPLPKRNSNQPL
                     RISSLHQRAWLLKLLALELHVGNVSSSSHREVCHRIIAHLFGQGETEYGSDNNILLLQ
                     SSPEDTANRAIGRSKVLELLEIIQFRSPDTTMKHSEILSHTKFGPVADDILGNPDEEG
                     GVYYYSERGDRLIDLNAFRDTLWQKCNLDNPQLSSFGNEVELNEVRNTVQQLLRWAYK
                     HNKNLEEQAAQLHMLMGWSQIVEISASRKLPSMENRSEILFQLLDASLNASSSPDCSL
                     KMALMLTQVSITCMAKLRDERFISPSVLHSDTVTCLDVLMTKRLSNGACHSILYKIMM
                     AMLRNDTSEALRRRQYTLLLSYFQYCQHILDPDVPTTILQSLLVDEQDLDLEKIDEDQ
                     VELARANLSIIRKEAQLILDLAIKDATQGSESGKIMALFVLDALICIDHEKFFLGQLQ
                     SRGFLRSCLMSLSNVSHQDSMHSIDPLQRLCALEAELALLLRISHKYGKSGAQILFSM
                     GAFEHISSCMTQNMQIKGNLRRFDSNFGKDSFADVHRQRMVVSPSLRLVFSLTSLVET
                     SEFFEVKNKIVREVVDFVKGHQLLFDQVLRQDVSDADDLAMEQMNLVVGILSKVWPYE
                     EGAEYGFVQGLFGLMHTLFSRDSILLSSAQSKQRKMELSAFRLCFSLSSYLYFLVKNK
                     SLRLQVSNNSTDYSVPPGQQQPTLSLLGFLLNSVTTALENAADEKSLLLNKIQDVNEL
                     PRQEVDEIIAMCVPEDQVASSDNIQKRRYIAMVEMCRVAGNKDRLITLVLLLAENLLN
                     IFLIHFQNNSLPDSSQANKALTYASTREVEDDLNAFCSKLLPIVERLEVLREDKVGHN
                     LKVFQRLASSLKELTIQKL"
     misc_feature    1240..4488
                     /gene="LOC139839846"
                     /note="Nuclear pore complex scaffold, nucleoporins
                     186/192/205; Region: Nup192; cl29134"
                     /db_xref="CDD:475157"
ORIGIN      
        1 ccatcaaaac ccaaaaccct caatcaaaac tagggcaaat atttcccgcc tttagccctt
       61 ctactctctc cgtctgcaac atcgccggaa ccggagatgg tctctgctaa gcaattgctt
      121 tccaccattg agtccacgct cttaggttcc actcctcctt cgccgtcgga gaagattcaa
      181 ctcattcaca ctattcgtca atctcttcct tctctccggt ctctcctatc ttttccgcca
      241 ccgaagcctt ctgacagagc acaagttcag tcaaaagaag tcaggcttcc tgattcaggg
      301 ccaattccac tcgatgatca ggatgttcaa atcgctctta agctgagtga tgatcttcat
      361 ctcaatgaaa tagactctgt gcggctgctt gtttctgcta atcaagagtg gggattacta
      421 gggagaggcc cgttggatat tgtacgcctt gcagcggggc tttggtatac agagagaaga
      481 gatctaataa cagctttata tacactgtta cgggcagttg tgttagatca aggacttgag
      541 gctgatgtcc aaggtgacat tttaagatac actgaagact taattagtag cgggcttcga
      601 caacgtctga tttctcttat aaaggaactc aatcgagaag aaccggctgg tttgggcggg
      661 cccagctccg agcgttatat tcttgactcg aggggtgctc ttgtagaaag acgagctgtt
      721 gtttgcaggg agagactcat tcttggtcac tgtcttgttc tatcactgct ggttgtccgt
      781 gcaagtccga aggatgtgaa agatatattt accactttga aagatagtgc aggggacatc
      841 tctggcagta ctgacattgt aaaaaaccag atcacatata gccttctttt ttcccttaca
      901 atttctttga tatctgatgc tctcagcgca tcgccagaca aaatgtctat cttgtcacag
      961 gatgcttcat ttaagcatga ttttcatgaa actgttatgg ctattgggaa tgatcaaagg
     1021 attgagggct gtatgaactg tgttagactt gcttgggctg tgcacctgat gataatacaa
     1081 gatgtaactg atgtaaggga gacaattaat gacacgagaa atattaattc atgcctggag
     1141 gttatttttt cgagcaacgt attccagttt ctgcttaaca cggttcttcg aactcctgct
     1201 taccagaatg atgacgagga tatgatctac atgtataatg catacttgca caagctgata
     1261 acatcttttc tatctcaccc acttgctaga gacaaggtca aagaaaccaa ggagaaggcc
     1321 atggttgctc ttagcccata caaaatgtct ggctcacatg atcatgcttt agataatcag
     1381 caagctgctg aatctgcccc tcaaactttt gtttctctcc tcgagtttgt cagtgaaatt
     1441 tatgagaaag aacctgaact tctatctggc aatgatgtca tatggacctt tgtgaagttt
     1501 gctggagagg atcacactaa ttttcagaca cttgtagcgt ttttgaagat gcttagtaca
     1561 ctggcttcga gcgaggaggg tgcatccaca gtgtatgaat tattgcaggg tagaacgttt
     1621 cgatctattt cttggaatac tttatttgat tgcttgtcta tttatgagga taagttcaag
     1681 caatcatctc agagcacggg tacgatatta cccgagattc aagagggaga tgcaaaagct
     1741 cttgttgctt atctgtgtgt tcttcgcaag gttgtggaaa atgggaatcc aattgaaagg
     1801 aagacatggt ttcctgatat tgagccatta tttaaacttc ttagttatga aaacgtgcct
     1861 ccttatttaa agggtgctct gcgtaattca atattgactt ttattcacgt ttttccaaac
     1921 tctaaagata ccatttgggg ttttcttgag caatacgatt taccagtggt ggttggccct
     1981 caagttgggc aaacaacggg ttctcaggtt tatgatatga gatttgagtt aaatgaggta
     2041 gaagcaagaa gtgatcacta tccctccaca atctcatttc ttaatctttt aaatgccctc
     2101 attgctgaag aaagggacac aactgatagg ggacgtagat ttataggcat cttccgattt
     2161 atatatgatc atgttttcgg accattttct cagcgggcat acgcagatcc ttctgagaaa
     2221 tggcagttgg gtgttgcatg tcttcaacat tttcaaatga ttttgagtat gtatgacata
     2281 aaagatgaag ataaagacat cgtggttggt cactctcagc tagtggcatc gcagtcaact
     2341 ccacttcaga tgcagcttcc tgttatagaa ttactcagag actttatgag tggaaaaacc
     2401 gtgtttcgaa atatcatggg tatactattg cctggagtgg atgccataat tgctgagcgg
     2461 acaaatcaga cttatggttt acttcttgaa aaagctgtgc ttctatctct tgaaattatt
     2521 attctggttt tggagaagga tttatcggtt gctgaatttt ggtgccccct ttaccagcct
     2581 tttgatgtca ttctttctca agatcataat cagattgtag ccttgttgga gtacatcaga
     2641 tatgattttc acccacaaat tcaacagcgc tctataaaaa taatgagcat cttaagttct
     2701 cgcatggtag ggcttgtacc gttactactg aaatccagct cggttggtct tctcattgaa
     2761 gattacgctg cttgcttgga gcaaagatca gaagggtgtc aaattatcga aaatacctct
     2821 gatgattcgg gtgttcttat aatgcaactt ctcattgata atgttaaccg cccagctccc
     2881 aacgtaacac atttcctgct gaggtttgat cttgattccc ctgtcgagag gacagtgtta
     2941 caaccaaagt tcaactacag ttgtttaaag gttattcttg atattctgga atcgctacca
     3001 aagcctgata ttaactcaat gctacatgag tttggttttc agctgcttta tgaattatgt
     3061 tcagattcac tgaccagtgg ccctaccatt gatctgctca gtaccagaaa gtatcaattt
     3121 tttgtcaagc atctggataa cattggtgtt gcaccactac caaaaagaaa tagcaaccag
     3181 ccacttcgaa ttagctctct gcatcagaga gcatggctgt taaagctttt ggctctagaa
     3241 ttgcacgtgg gcaatgtgtc atcatccagc catcgagaag tgtgtcaccg cataattgct
     3301 catctgtttg gtcaaggtga aaccgaatat ggtagtgata ataatattct tttgcttcag
     3361 agtagtcctg aagatactgc aaacagagcc attgggagga gtaaggtgtt agagttgctt
     3421 gaaattatcc agtttaggtc tccagataca acaatgaagc attccgagat tctttctcac
     3481 acaaaatttg gaccagtggc tgatgatata cttgggaatc cagatgaaga ggggggtgtt
     3541 tattactact cagaacgagg tgatcggttg attgacctaa atgcatttcg agacacactt
     3601 tggcagaagt gcaatcttga caatccacag ctgagttcct ttggcaatga agttgaattg
     3661 aacgaagtaa gaaataccgt tcagcaacta ttgcgctggg catataaaca caacaagaac
     3721 cttgaggaac aggctgctca actccatatg ttaatgggat ggtcacaaat cgttgagatt
     3781 tcagcttcaa gaaagttgcc ctccatggaa aaccgatctg aaatattgtt tcagttgctg
     3841 gatgcatctt taaatgcttc tagctctcca gattgttcct taaagatggc cttaatgtta
     3901 actcaggttt caattacatg tatggcaaaa ctacgcgatg agaggtttat tagcccaagt
     3961 gtgttacact ccgacactgt cacttgtctt gatgttttaa tgacaaagcg gctttcaaat
     4021 ggtgcatgtc actctatctt gtataaaatc atgatggcaa tgctcagaaa tgacacatca
     4081 gaagcattaa ggagacgcca atacacgtta cttttaagct acttccagta ctgtcagcac
     4141 atactggatc cagatgtgcc tactacaatt ttgcaatcgt tgttagtgga tgagcaagat
     4201 ttggatctcg agaagattga tgaggatcag gttgagctgg cacgtgcaaa cttatctatt
     4261 atacgaaaag aagctcaact gattttagat ctggccatta aagatgcaac tcaaggcagt
     4321 gaatctggaa agataatggc cctttttgtt cttgatgcat taatttgtat tgatcacgag
     4381 aagtttttct taggtcaact tcaaagcaga ggctttctga ggtcttgcct catgagtctc
     4441 agcaatgttt cacatcagga tagcatgcac tcaatagatc cgttgcaacg tttatgcgct
     4501 ctggaggcag aacttgcttt actattgaga attagccata aatatggtaa atcaggggct
     4561 caaattcttt tctctatggg tgcgtttgag cacatctctt catgcatgac tcaaaacatg
     4621 caaatcaagg ggaacctaag acgctttgac tctaattttg ggaaggattc gttcgctgat
     4681 gttcacagac aacgaatggt cgtatctcca tcacttcgat tggtcttctc tttgacctca
     4741 ttggtcgaga cctcagagtt ttttgaggtg aagaataaaa ttgtccgtga agttgttgac
     4801 tttgtcaaag ggcatcaact actttttgat caagttcttc gccaggatgt ttctgatgct
     4861 gatgatttgg caatggagca gatgaacctt gttgttggca tacttagcaa ggtttggcca
     4921 tatgaggagg gtgctgagta tggttttgtt caagggctct ttggattaat gcacactctt
     4981 ttttcacgtg actcgatact tctttcttca gctcaatcaa aacagagaaa aatggaatta
     5041 agtgcatttc gcctgtgctt tagcttgagc tcttatctct atttcctcgt taaaaataaa
     5101 tccttgagac ttcaggtttc aaacaattca accgattata gtgtgccacc tggacaacag
     5161 caaccaacat taagcttgct tgggttcctt ctgaactccg tgaccactgc tcttgaaaat
     5221 gccgcagatg aaaaatcttt attgcttaac aagattcaag atgtaaatga actaccacga
     5281 caagaagtag atgaaattat tgccatgtgt gttcctgaag atcaagttgc atcgtcagat
     5341 aatatccaga aaaggaggta cattgcaatg gtggagatgt gtcgggtggc tggaaataag
     5401 gaccggctta taactcttgt gcttctactt gcagagaatt tgctcaacat ttttctcatc
     5461 cattttcaga acaattcctt acccgattct agtcaagcta ataaggcgct tacatatgct
     5521 tcaactagag aagtcgagga tgacctaaat gcattttgtt caaagcttct tccgatagtg
     5581 gaaagacttg aggtgctaag agaggacaaa gtcggtcata atcttaaggt gtttcagaga
     5641 ttagcaagtt ctttgaagga actaacgata cagaagctat gactttgaca ggttgatgaa
     5701 tttcttgccc tctgtcgctg ctgggtgaat tgttgtatct tgtatgtatg tttggtgcaa
     5761 agttgtcatc agttttgtcg tcaagttata tgataagaaa ttaggtcttt ataagattag
     5821 gtccaatcaa tgaactctta caggcttcat tgtattatcc gatgtacttg taagcaagta
     5881 cttagaaaaa aagtatcaag tcactcagtt acttatgcct caatggatct aacaaagatt
     5941 atgtgtgatc atttcttcat ttatacagat tgttatgtat cggtttggta aaaagtacaa
     6001 tcttcaattc acttaaatat gtatgacatt aactaaacat tgtatactgt aacacaaatg
     6061 tatc
//
LOCUS       XM_071830019            5974 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear pore complex protein
            NUP205 (LOC139839846), transcript variant X2, mRNA.
ACCESSION   XM_071830019
VERSION     XM_071830019.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5974
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5974
                     /gene="LOC139839846"
                     /note="nuclear pore complex protein NUP205; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839846"
     CDS             97..5592
                     /gene="LOC139839846"
                     /codon_start=1
                     /product="nuclear pore complex protein NUP205 isoform X2"
                     /protein_id="XP_071686120.1"
                     /db_xref="GeneID:139839846"
                     /translation="MVSAKQLLSTIESTLLGSTPPSPSEKIQLIHTIRQSLPSLRSLL
                     SFPPPKPSDRAQVQSKEVRLPDSGPIPLDDQDVQIALKLSDDLHLNEIDSVRLLVSAN
                     QEWGLLGRGPLDIVRLAAGLWYTERRDLITALYTLLRAVVLDQGLEADVQGDILRYTE
                     DLISSGLRQRLISLIKELNREEPAGLGGPSSERYILDSRGALVERRAVVCRERLILGH
                     CLVLSLLVVRASPKDVKDIFTTLKDSAGDISGSTDIVKNQITYSLLFSLTISLISDAL
                     SASPDKMSILSQDASFKHDFHETVMAIGNDQRIEGCMNCVRLAWAVHLMIIQDVTDVR
                     ETINDTRNINSCLEVIFSSNVFQFLLNTVLRTPAYQVKETKEKAMVALSPYKMSGSHD
                     HALDNQQAAESAPQTFVSLLEFVSEIYEKEPELLSGNDVIWTFVKFAGEDHTNFQTLV
                     AFLKMLSTLASSEEGASTVYELLQGRTFRSISWNTLFDCLSIYEDKFKQSSQSTGTIL
                     PEIQEGDAKALVAYLCVLRKVVENGNPIERKTWFPDIEPLFKLLSYENVPPYLKGALR
                     NSILTFIHVFPNSKDTIWGFLEQYDLPVVVGPQVGQTTGSQVYDMRFELNEVEARSDH
                     YPSTISFLNLLNALIAEERDTTDRGRRFIGIFRFIYDHVFGPFSQRAYADPSEKWQLG
                     VACLQHFQMILSMYDIKDEDKDIVVGHSQLVASQSTPLQMQLPVIELLRDFMSGKTVF
                     RNIMGILLPGVDAIIAERTNQTYGLLLEKAVLLSLEIIILVLEKDLSVAEFWCPLYQP
                     FDVILSQDHNQIVALLEYIRYDFHPQIQQRSIKIMSILSSRMVGLVPLLLKSSSVGLL
                     IEDYAACLEQRSEGCQIIENTSDDSGVLIMQLLIDNVNRPAPNVTHFLLRFDLDSPVE
                     RTVLQPKFNYSCLKVILDILESLPKPDINSMLHEFGFQLLYELCSDSLTSGPTIDLLS
                     TRKYQFFVKHLDNIGVAPLPKRNSNQPLRISSLHQRAWLLKLLALELHVGNVSSSSHR
                     EVCHRIIAHLFGQGETEYGSDNNILLLQSSPEDTANRAIGRSKVLELLEIIQFRSPDT
                     TMKHSEILSHTKFGPVADDILGNPDEEGGVYYYSERGDRLIDLNAFRDTLWQKCNLDN
                     PQLSSFGNEVELNEVRNTVQQLLRWAYKHNKNLEEQAAQLHMLMGWSQIVEISASRKL
                     PSMENRSEILFQLLDASLNASSSPDCSLKMALMLTQVSITCMAKLRDERFISPSVLHS
                     DTVTCLDVLMTKRLSNGACHSILYKIMMAMLRNDTSEALRRRQYTLLLSYFQYCQHIL
                     DPDVPTTILQSLLVDEQDLDLEKIDEDQVELARANLSIIRKEAQLILDLAIKDATQGS
                     ESGKIMALFVLDALICIDHEKFFLGQLQSRGFLRSCLMSLSNVSHQDSMHSIDPLQRL
                     CALEAELALLLRISHKYGKSGAQILFSMGAFEHISSCMTQNMQIKGNLRRFDSNFGKD
                     SFADVHRQRMVVSPSLRLVFSLTSLVETSEFFEVKNKIVREVVDFVKGHQLLFDQVLR
                     QDVSDADDLAMEQMNLVVGILSKVWPYEEGAEYGFVQGLFGLMHTLFSRDSILLSSAQ
                     SKQRKMELSAFRLCFSLSSYLYFLVKNKSLRLQVSNNSTDYSVPPGQQQPTLSLLGFL
                     LNSVTTALENAADEKSLLLNKIQDVNELPRQEVDEIIAMCVPEDQVASSDNIQKRRYI
                     AMVEMCRVAGNKDRLITLVLLLAENLLNIFLIHFQNNSLPDSSQANKALTYASTREVE
                     DDLNAFCSKLLPIVERLEVLREDKVGHNLKVFQRLASSLKELTIQKL"
     misc_feature    1270..4398
                     /gene="LOC139839846"
                     /note="Nuclear pore complex scaffold, nucleoporins
                     186/192/205; Region: Nup192; cl29134"
                     /db_xref="CDD:475157"
ORIGIN      
        1 ccatcaaaac ccaaaaccct caatcaaaac tagggcaaat atttcccgcc tttagccctt
       61 ctactctctc cgtctgcaac atcgccggaa ccggagatgg tctctgctaa gcaattgctt
      121 tccaccattg agtccacgct cttaggttcc actcctcctt cgccgtcgga gaagattcaa
      181 ctcattcaca ctattcgtca atctcttcct tctctccggt ctctcctatc ttttccgcca
      241 ccgaagcctt ctgacagagc acaagttcag tcaaaagaag tcaggcttcc tgattcaggg
      301 ccaattccac tcgatgatca ggatgttcaa atcgctctta agctgagtga tgatcttcat
      361 ctcaatgaaa tagactctgt gcggctgctt gtttctgcta atcaagagtg gggattacta
      421 gggagaggcc cgttggatat tgtacgcctt gcagcggggc tttggtatac agagagaaga
      481 gatctaataa cagctttata tacactgtta cgggcagttg tgttagatca aggacttgag
      541 gctgatgtcc aaggtgacat tttaagatac actgaagact taattagtag cgggcttcga
      601 caacgtctga tttctcttat aaaggaactc aatcgagaag aaccggctgg tttgggcggg
      661 cccagctccg agcgttatat tcttgactcg aggggtgctc ttgtagaaag acgagctgtt
      721 gtttgcaggg agagactcat tcttggtcac tgtcttgttc tatcactgct ggttgtccgt
      781 gcaagtccga aggatgtgaa agatatattt accactttga aagatagtgc aggggacatc
      841 tctggcagta ctgacattgt aaaaaaccag atcacatata gccttctttt ttcccttaca
      901 atttctttga tatctgatgc tctcagcgca tcgccagaca aaatgtctat cttgtcacag
      961 gatgcttcat ttaagcatga ttttcatgaa actgttatgg ctattgggaa tgatcaaagg
     1021 attgagggct gtatgaactg tgttagactt gcttgggctg tgcacctgat gataatacaa
     1081 gatgtaactg atgtaaggga gacaattaat gacacgagaa atattaattc atgcctggag
     1141 gttatttttt cgagcaacgt attccagttt ctgcttaaca cggttcttcg aactcctgct
     1201 taccaggtca aagaaaccaa ggagaaggcc atggttgctc ttagcccata caaaatgtct
     1261 ggctcacatg atcatgcttt agataatcag caagctgctg aatctgcccc tcaaactttt
     1321 gtttctctcc tcgagtttgt cagtgaaatt tatgagaaag aacctgaact tctatctggc
     1381 aatgatgtca tatggacctt tgtgaagttt gctggagagg atcacactaa ttttcagaca
     1441 cttgtagcgt ttttgaagat gcttagtaca ctggcttcga gcgaggaggg tgcatccaca
     1501 gtgtatgaat tattgcaggg tagaacgttt cgatctattt cttggaatac tttatttgat
     1561 tgcttgtcta tttatgagga taagttcaag caatcatctc agagcacggg tacgatatta
     1621 cccgagattc aagagggaga tgcaaaagct cttgttgctt atctgtgtgt tcttcgcaag
     1681 gttgtggaaa atgggaatcc aattgaaagg aagacatggt ttcctgatat tgagccatta
     1741 tttaaacttc ttagttatga aaacgtgcct ccttatttaa agggtgctct gcgtaattca
     1801 atattgactt ttattcacgt ttttccaaac tctaaagata ccatttgggg ttttcttgag
     1861 caatacgatt taccagtggt ggttggccct caagttgggc aaacaacggg ttctcaggtt
     1921 tatgatatga gatttgagtt aaatgaggta gaagcaagaa gtgatcacta tccctccaca
     1981 atctcatttc ttaatctttt aaatgccctc attgctgaag aaagggacac aactgatagg
     2041 ggacgtagat ttataggcat cttccgattt atatatgatc atgttttcgg accattttct
     2101 cagcgggcat acgcagatcc ttctgagaaa tggcagttgg gtgttgcatg tcttcaacat
     2161 tttcaaatga ttttgagtat gtatgacata aaagatgaag ataaagacat cgtggttggt
     2221 cactctcagc tagtggcatc gcagtcaact ccacttcaga tgcagcttcc tgttatagaa
     2281 ttactcagag actttatgag tggaaaaacc gtgtttcgaa atatcatggg tatactattg
     2341 cctggagtgg atgccataat tgctgagcgg acaaatcaga cttatggttt acttcttgaa
     2401 aaagctgtgc ttctatctct tgaaattatt attctggttt tggagaagga tttatcggtt
     2461 gctgaatttt ggtgccccct ttaccagcct tttgatgtca ttctttctca agatcataat
     2521 cagattgtag ccttgttgga gtacatcaga tatgattttc acccacaaat tcaacagcgc
     2581 tctataaaaa taatgagcat cttaagttct cgcatggtag ggcttgtacc gttactactg
     2641 aaatccagct cggttggtct tctcattgaa gattacgctg cttgcttgga gcaaagatca
     2701 gaagggtgtc aaattatcga aaatacctct gatgattcgg gtgttcttat aatgcaactt
     2761 ctcattgata atgttaaccg cccagctccc aacgtaacac atttcctgct gaggtttgat
     2821 cttgattccc ctgtcgagag gacagtgtta caaccaaagt tcaactacag ttgtttaaag
     2881 gttattcttg atattctgga atcgctacca aagcctgata ttaactcaat gctacatgag
     2941 tttggttttc agctgcttta tgaattatgt tcagattcac tgaccagtgg ccctaccatt
     3001 gatctgctca gtaccagaaa gtatcaattt tttgtcaagc atctggataa cattggtgtt
     3061 gcaccactac caaaaagaaa tagcaaccag ccacttcgaa ttagctctct gcatcagaga
     3121 gcatggctgt taaagctttt ggctctagaa ttgcacgtgg gcaatgtgtc atcatccagc
     3181 catcgagaag tgtgtcaccg cataattgct catctgtttg gtcaaggtga aaccgaatat
     3241 ggtagtgata ataatattct tttgcttcag agtagtcctg aagatactgc aaacagagcc
     3301 attgggagga gtaaggtgtt agagttgctt gaaattatcc agtttaggtc tccagataca
     3361 acaatgaagc attccgagat tctttctcac acaaaatttg gaccagtggc tgatgatata
     3421 cttgggaatc cagatgaaga ggggggtgtt tattactact cagaacgagg tgatcggttg
     3481 attgacctaa atgcatttcg agacacactt tggcagaagt gcaatcttga caatccacag
     3541 ctgagttcct ttggcaatga agttgaattg aacgaagtaa gaaataccgt tcagcaacta
     3601 ttgcgctggg catataaaca caacaagaac cttgaggaac aggctgctca actccatatg
     3661 ttaatgggat ggtcacaaat cgttgagatt tcagcttcaa gaaagttgcc ctccatggaa
     3721 aaccgatctg aaatattgtt tcagttgctg gatgcatctt taaatgcttc tagctctcca
     3781 gattgttcct taaagatggc cttaatgtta actcaggttt caattacatg tatggcaaaa
     3841 ctacgcgatg agaggtttat tagcccaagt gtgttacact ccgacactgt cacttgtctt
     3901 gatgttttaa tgacaaagcg gctttcaaat ggtgcatgtc actctatctt gtataaaatc
     3961 atgatggcaa tgctcagaaa tgacacatca gaagcattaa ggagacgcca atacacgtta
     4021 cttttaagct acttccagta ctgtcagcac atactggatc cagatgtgcc tactacaatt
     4081 ttgcaatcgt tgttagtgga tgagcaagat ttggatctcg agaagattga tgaggatcag
     4141 gttgagctgg cacgtgcaaa cttatctatt atacgaaaag aagctcaact gattttagat
     4201 ctggccatta aagatgcaac tcaaggcagt gaatctggaa agataatggc cctttttgtt
     4261 cttgatgcat taatttgtat tgatcacgag aagtttttct taggtcaact tcaaagcaga
     4321 ggctttctga ggtcttgcct catgagtctc agcaatgttt cacatcagga tagcatgcac
     4381 tcaatagatc cgttgcaacg tttatgcgct ctggaggcag aacttgcttt actattgaga
     4441 attagccata aatatggtaa atcaggggct caaattcttt tctctatggg tgcgtttgag
     4501 cacatctctt catgcatgac tcaaaacatg caaatcaagg ggaacctaag acgctttgac
     4561 tctaattttg ggaaggattc gttcgctgat gttcacagac aacgaatggt cgtatctcca
     4621 tcacttcgat tggtcttctc tttgacctca ttggtcgaga cctcagagtt ttttgaggtg
     4681 aagaataaaa ttgtccgtga agttgttgac tttgtcaaag ggcatcaact actttttgat
     4741 caagttcttc gccaggatgt ttctgatgct gatgatttgg caatggagca gatgaacctt
     4801 gttgttggca tacttagcaa ggtttggcca tatgaggagg gtgctgagta tggttttgtt
     4861 caagggctct ttggattaat gcacactctt ttttcacgtg actcgatact tctttcttca
     4921 gctcaatcaa aacagagaaa aatggaatta agtgcatttc gcctgtgctt tagcttgagc
     4981 tcttatctct atttcctcgt taaaaataaa tccttgagac ttcaggtttc aaacaattca
     5041 accgattata gtgtgccacc tggacaacag caaccaacat taagcttgct tgggttcctt
     5101 ctgaactccg tgaccactgc tcttgaaaat gccgcagatg aaaaatcttt attgcttaac
     5161 aagattcaag atgtaaatga actaccacga caagaagtag atgaaattat tgccatgtgt
     5221 gttcctgaag atcaagttgc atcgtcagat aatatccaga aaaggaggta cattgcaatg
     5281 gtggagatgt gtcgggtggc tggaaataag gaccggctta taactcttgt gcttctactt
     5341 gcagagaatt tgctcaacat ttttctcatc cattttcaga acaattcctt acccgattct
     5401 agtcaagcta ataaggcgct tacatatgct tcaactagag aagtcgagga tgacctaaat
     5461 gcattttgtt caaagcttct tccgatagtg gaaagacttg aggtgctaag agaggacaaa
     5521 gtcggtcata atcttaaggt gtttcagaga ttagcaagtt ctttgaagga actaacgata
     5581 cagaagctat gactttgaca ggttgatgaa tttcttgccc tctgtcgctg ctgggtgaat
     5641 tgttgtatct tgtatgtatg tttggtgcaa agttgtcatc agttttgtcg tcaagttata
     5701 tgataagaaa ttaggtcttt ataagattag gtccaatcaa tgaactctta caggcttcat
     5761 tgtattatcc gatgtacttg taagcaagta cttagaaaaa aagtatcaag tcactcagtt
     5821 acttatgcct caatggatct aacaaagatt atgtgtgatc atttcttcat ttatacagat
     5881 tgttatgtat cggtttggta aaaagtacaa tcttcaattc acttaaatat gtatgacatt
     5941 aactaaacat tgtatactgt aacacaaatg tatc
//
LOCUS       XM_071830020             948 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839847), mRNA.
ACCESSION   XM_071830020
VERSION     XM_071830020.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..948
                     /gene="LOC139839847"
                     /note="uncharacterized LOC139839847; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839847"
     CDS             104..739
                     /gene="LOC139839847"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686121.1"
                     /db_xref="GeneID:139839847"
                     /translation="MESTLLSSARYISTKSNSNVRQFQSSFSGKLFVNTHFTKSSDAY
                     TNYKSSTVKITSLFSLGKKKAKVTKRETVIPDPDYRIPVVLLGVSGLLVYQDNLIAAA
                     PVGLLGLLLLFQTTRVRFVFDDEALEVKVGQELDDSGENVFVGGKNRWKYSSFINWEL
                     WWPSFPILVYFKEAQTKPEGQVHFFPVIFNGKQLYDVMVERAGPSKTSTPK"
     misc_feature    326..700
                     /gene="LOC139839847"
                     /note="Protein of unknown function (DUF3119); Region:
                     DUF3119; pfam11317"
                     /db_xref="CDD:431808"
     polyA_site      948
                     /gene="LOC139839847"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttattaattg cagtatcatc cacccatttc catattacac aatcttcttg tgtttttagc
       61 tctgctgttc aaaatacgga cacaatttcc agaagaaaaa aaaatggaaa gcaccctctt
      121 atcatctgca cgatatattt ccacaaaaag caacagcaat gtgaggcagt ttcagagttc
      181 atttagtggc aaattgtttg ttaacactca ctttactaaa agtagtgatg catatactaa
      241 ctacaaaagt agcactgtta agatcacttc attgttttca cttggtaaaa agaaggccaa
      301 ggtaactaaa agagagactg ttatcccaga tccagattat cgaataccgg ttgttcttct
      361 tggtgtatcc ggtttgttag tatatcaaga taatctaatt gcagctgctc ctgttggtct
      421 tcttggctta cttttattgt ttcagacaac aagagtgagg tttgtcttcg acgacgaagc
      481 tctggaggta aaagtgggac aagaacttga tgattcgggt gaaaacgtgt ttgttggcgg
      541 caaaaaccgt tggaaatact cttcattcat aaactgggag ctctggtggc caagttttcc
      601 gattctggtg tacttcaaag aagctcagac gaaacccgaa ggacaagtcc atttcttccc
      661 agtgattttc aacgggaaac agttgtacga tgttatggtg gaacgagctg gcccttcgaa
      721 gactagtacc ccaaagtagt tctatccgta aagataaatg aatttatgag gaaggaaatt
      781 ttctatccgt aacgtatcca ttatgaagat acatttgtgt tacagtatac aatgtttagt
      841 taatgtcata catatttaag tgaattgaag attgtacttt ttaccaaacc gatacataac
      901 aatctgtata aatgaagaaa tgatcacaca taatctttgt tagatcca
//
LOCUS       XM_071830021            3061 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839848), transcript variant X1, mRNA.
ACCESSION   XM_071830021
VERSION     XM_071830021.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3061
                     /gene="LOC139839848"
                     /note="uncharacterized LOC139839848; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839848"
     CDS             62..2779
                     /gene="LOC139839848"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686122.1"
                     /db_xref="GeneID:139839848"
                     /translation="MKLNQNSKLKTKTRYHHHKSPTDAEMTNLGYYFSSSSSSSNLSP
                     LAPPFTVERSNPNKLNSTSNLDFNFSSKSDELTTNSSSVWSQFHSSNASQGLDADSIR
                     IATVPDANSTTNPYYYFNMNMNSNSSVESGFQHENQHFFGARTKYPDAVNSSCTLSST
                     SQPNLINSQSPYNWTLDRDTINSPNTLNWSSMESSIKSGLEPVNQSDGHLFGVKRSPQ
                     PKTWNYVNDNNGSGSLFRDYMPSQVDYGLGLSGSARYSRQADGSQGKEDYLLGGMSDI
                     ARENNIGPSIILKSQDASFSSTNQGNVSSGFSDEQTITWNGGTSYFEKRPIMLDFSSG
                     YISPSITKSSPSIVIKPSVKVPPFSTRGAVSTNSTTIFNSNDDLFSHKPLKEKGHEAK
                     DKFLTSNQLSDQRDASNKSSTDGRLNFEFKASTNMEVPNIKSSKDSKFAANVSEHFDH
                     PNSSEDSPCWKGAPVRYSSSGSSSEADSSQHPMKKQQKINVVEPEMKIRSSDAVEDKT
                     MHVSVGNDDNLVPTEILDLNVVVKALSNLSQLLLLHSSKDEYGLKENDHKTLADVIHN
                     LNLCVSRKNQQVGPAQDDHESYFDGSAKNTVELQGASLRDNDDLPKDYNMIQKIKRLL
                     DENLEYKEDKDLSSDTLLYKNLWLETEAELCASSYRARFERIKREMNKSKPSVPDVSE
                     VASDKKKVSTSNLSPIAAKLMHEAAASNITKTHEQYPSFSGVIDHIDDVENTVMTRFN
                     ILKRREQSNPFNLEEKKHDDDQEYVGNEIPSSIVAKEPHWQQHLPANDAVTIPTYGNQ
                     RLHYSLAMEDENVEHAVMARLNILKSRGESSSVNIECEHLEDDRAEVAGKESQGFGVA
                     VGPHFKHLAGKEEEVAPGSGGTSLIHNQFESGSYTTCGGSSDWEYVMKR"
ORIGIN      
        1 gcagaatata ataatggtgc attactgttt tttttactat taatagtaga aatcaaaatc
       61 aatgaaatta aatcaaaatt caaagttgaa aactaaaacc agataccatc atcacaagtc
      121 ccccactgac gctgaaatga caaatttagg gtattatttt tcatcatcat catcatcttc
      181 aaatttgtca ccattagcgc caccctttac tgttgaacga tctaacccta ataagctcaa
      241 ttcaacttca aacctagatt ttaatttcag tagcaaatca gatgaattaa ctaccaacag
      301 tagttccgtt tggtcccaat ttcactcttc aaatgcctca caaggtttag atgctgattc
      361 gattaggatc gcaaccgttc ctgatgctaa ttcaacaaca aatccttatt actattttaa
      421 tatgaatatg aattcgaatt ctagtgttga atcaggcttc caacacgaaa atcagcattt
      481 tttcggtgct cggactaaat atcctgatgc tgtaaactca tcgtgtactc ttagttcgac
      541 ttcgcagccg aacctgataa attcacaaag cccttacaat tggactttag atcgggacac
      601 tattaattca ccaaacactc ttaactggtc ttctatggaa tcgagtatta agtcagggtt
      661 agaacctgta aatcagtctg atggccattt gtttggtgta aaacggagtc cgcaacctaa
      721 aacatggaat tacgttaatg ataataacgg aagtgggagt ttgtttcgtg attacatgcc
      781 ttctcaagtt gattatggcc taggcttgtc aggatcagca agatatagta gacaagctga
      841 tggatcacaa ggaaaagaag attatttgct tggaggaatg tcagatattg ctagagaaaa
      901 caacatcggg ccttcaatta ttctaaagtc tcaagatgca tcattttctt caacaaatca
      961 aggcaatgtt tctagtggtt tttcggatga acaaacgatt acgtggaatg gcgggacatc
     1021 atattttgag aaaagaccaa tcatgcttga tttctctagt ggttacatat ctccatcaat
     1081 aacaaaatct tcaccttcta ttgtgataaa accttcagtc aaagttcctc ccttttcaac
     1141 tcggggtgca gtttctacaa acagtacaac aatatttaac agcaatgatg atctctttag
     1201 tcataaaccc ttgaaagaaa agggtcatga agccaaagat aagtttttaa cttcaaacca
     1261 actgagcgat cagagagatg catcgaacaa gagttctact gatggtcggt taaattttga
     1321 gttcaaagca agtacaaata tggaagttcc taatatcaaa agctctaaag attcaaaatt
     1381 tgctgcaaat gtttcagaac attttgatca tccgaattct tcagaagatt ctccatgttg
     1441 gaaaggagct cccgttcggt attcatcatc tgggtcctcc tcagaagcag attcatctca
     1501 gcatcctatg aaaaaacaac aaaaaattaa tgttgtggag cccgagatga aaatccgatc
     1561 aagtgatgca gtcgaggaca aaaccatgca tgtttctgtc ggaaatgatg ataatcttgt
     1621 accaactgaa atcttggatt tgaatgttgt tgttaaagca ctgagtaacc tttcacagtt
     1681 gcttttgctt catagttcaa aggatgaata tggattaaag gaaaatgatc acaagaccct
     1741 cgctgatgtc attcacaatc ttaatctgtg tgtatctaga aaaaaccaac aagtgggtcc
     1801 tgcacaagat gatcacgaaa gttattttga tggttccgct aaaaacactg tagaactaca
     1861 gggtgcctct ttgagggaca atgatgatct accgaaagat tataatatga ttcagaaaat
     1921 aaaaaggtta ctggatgaga atttagagta caaggaggac aaggatctat cttctgatac
     1981 tcttttgtac aaaaatctgt ggcttgaaac tgaagcagag ctgtgtgcct cgagctacag
     2041 agctcgtttt gagcgtatca agagagaaat gaacaaatct aaaccatcag tcccagatgt
     2101 atctgaagtt gcttctgaca aaaagaaagt ttcaacttcc aatttgtcac caattgctgc
     2161 caaactaatg catgaagctg ctgctagcaa tataacaaag acccatgaac aatatccatc
     2221 tttttcgggt gtcattgacc atatcgatga tgttgagaat acagtgatga cacgttttaa
     2281 tattttgaaa cgtcgtgaac agtctaatcc atttaacttg gaagagaaaa aacatgatga
     2341 tgatcaagaa tatgttggta atgaaattcc aagctctata gtggctaagg aaccccattg
     2401 gcaacagcat ctacctgcaa acgatgcagt tacgattcct acttatggta accagaggtt
     2461 acattactca cttgccatgg aggatgagaa tgttgaacac gcagttatgg ctaggttgaa
     2521 tattttgaaa tctcgaggtg agtccagttc tgttaatatt gaatgtgaac atcttgaaga
     2581 tgatcgtgct gaagttgcag gtaaagaaag tcagggtttt ggtgtagctg ttggacctca
     2641 ttttaaacat ctggctggta aagaagagga agtggcacca ggctctggtg ggacaagcct
     2701 gatacataac cagttcgagt ctgggtcata cactacttgt ggtggatcgt ccgactggga
     2761 atatgtcatg aaaagatgag ctttcaagga acagagtcta aactgatatg attgttaatg
     2821 tccctttcag tctcaggagg tacattgtat caagtttggt agtgtaattg gcaacatata
     2881 tgtgttcgag ttgcattgta taaaggtggt ttttctttac cttgaaactt tgtataaagg
     2941 ggaatgtttt tacctttcaa ctcaggttat gtatgatgca taatgagcaa acttatatac
     3001 gataatctaa tcgaagtatc tataaccctt ggatttccga actcatctta atactttaca
     3061 a
//
LOCUS       XM_071830022            3057 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839848), transcript variant X2, mRNA.
ACCESSION   XM_071830022
VERSION     XM_071830022.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3057
                     /gene="LOC139839848"
                     /note="uncharacterized LOC139839848; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839848"
     CDS             62..2776
                     /gene="LOC139839848"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686123.1"
                     /db_xref="GeneID:139839848"
                     /translation="MKLNQNSKLKTKTRYHHHKSPTDAEMTNLGYYFSSSSSSSNLSP
                     LAPPFTVERSNPNKLNSTSNLDFNFSSKSDELTTNSSSVWSQFHSSNASQGLDADSIR
                     IATVPDANSTTNPYYYFNMNMNSNSSVESGFQHENQHFFGARTKYPDAVNSSCTLSST
                     SQPNLINSQSPYNWTLDRDTINSPNTLNWSSMESSIKSGLEPVNQSDGHLFGVKRSPQ
                     PKTWNYVNDNNGSGSLFRDYMPSQVDYGLGLSGSARYSRQADGSQGKEDYLLGGMSDI
                     ARENNIGPSIILKSQDASFSSTNQGNVSSGFSDEQTITWNGGTSYFEKRPIMLDFSSG
                     YISPSITKSSPSIVIKPSVKVPPFSTRGAVSTNSTTIFNSNDDLFSHKPLKEKGHEAK
                     DKFLTSNQLSDQRDASNKSSTDGRLNFEFKASTNMEVPNIKSSKDSKFAANVSEHFDH
                     PNSSEDSPCWKGAPVRYSSSGSSSEADSSQHPMKKQQKINVVEPEMKIRSSDAVEDKT
                     MHVSVGNDDNLVPTEILDLNVVVKALSNLSQLLLLHSSKDEYGLKENDHKTLADVIHN
                     LNLCVSRKNQQVGPAQDDHESYFDGSAKNTVELQGASLRDNDDLPKDYNMIQKIKRLL
                     DENLEYKEDKDLSSDTLLYKNLWLETEAELCASSYRARFERIKREMNKSKPSVPDVSE
                     VASDKKKVSTSNLSPIAAKLMHEAAASNITKTHEQYPSFSGVIDHIDDVENTVMTRFN
                     ILKRREQSNPFNLEEKKHDDDQEYVGNEIPSSIVAKEPHWQQHLPDDAVTIPTYGNQR
                     LHYSLAMEDENVEHAVMARLNILKSRGESSSVNIECEHLEDDRAEVAGKESQGFGVAV
                     GPHFKHLAGKEEEVAPGSGGTSLIHNQFESGSYTTCGGSSDWEYVMKR"
ORIGIN      
        1 gcagaatata ataatggtgc attactgttt tttttactat taatagtaga aatcaaaatc
       61 aatgaaatta aatcaaaatt caaagttgaa aactaaaacc agataccatc atcacaagtc
      121 ccccactgac gctgaaatga caaatttagg gtattatttt tcatcatcat catcatcttc
      181 aaatttgtca ccattagcgc caccctttac tgttgaacga tctaacccta ataagctcaa
      241 ttcaacttca aacctagatt ttaatttcag tagcaaatca gatgaattaa ctaccaacag
      301 tagttccgtt tggtcccaat ttcactcttc aaatgcctca caaggtttag atgctgattc
      361 gattaggatc gcaaccgttc ctgatgctaa ttcaacaaca aatccttatt actattttaa
      421 tatgaatatg aattcgaatt ctagtgttga atcaggcttc caacacgaaa atcagcattt
      481 tttcggtgct cggactaaat atcctgatgc tgtaaactca tcgtgtactc ttagttcgac
      541 ttcgcagccg aacctgataa attcacaaag cccttacaat tggactttag atcgggacac
      601 tattaattca ccaaacactc ttaactggtc ttctatggaa tcgagtatta agtcagggtt
      661 agaacctgta aatcagtctg atggccattt gtttggtgta aaacggagtc cgcaacctaa
      721 aacatggaat tacgttaatg ataataacgg aagtgggagt ttgtttcgtg attacatgcc
      781 ttctcaagtt gattatggcc taggcttgtc aggatcagca agatatagta gacaagctga
      841 tggatcacaa ggaaaagaag attatttgct tggaggaatg tcagatattg ctagagaaaa
      901 caacatcggg ccttcaatta ttctaaagtc tcaagatgca tcattttctt caacaaatca
      961 aggcaatgtt tctagtggtt tttcggatga acaaacgatt acgtggaatg gcgggacatc
     1021 atattttgag aaaagaccaa tcatgcttga tttctctagt ggttacatat ctccatcaat
     1081 aacaaaatct tcaccttcta ttgtgataaa accttcagtc aaagttcctc ccttttcaac
     1141 tcggggtgca gtttctacaa acagtacaac aatatttaac agcaatgatg atctctttag
     1201 tcataaaccc ttgaaagaaa agggtcatga agccaaagat aagtttttaa cttcaaacca
     1261 actgagcgat cagagagatg catcgaacaa gagttctact gatggtcggt taaattttga
     1321 gttcaaagca agtacaaata tggaagttcc taatatcaaa agctctaaag attcaaaatt
     1381 tgctgcaaat gtttcagaac attttgatca tccgaattct tcagaagatt ctccatgttg
     1441 gaaaggagct cccgttcggt attcatcatc tgggtcctcc tcagaagcag attcatctca
     1501 gcatcctatg aaaaaacaac aaaaaattaa tgttgtggag cccgagatga aaatccgatc
     1561 aagtgatgca gtcgaggaca aaaccatgca tgtttctgtc ggaaatgatg ataatcttgt
     1621 accaactgaa atcttggatt tgaatgttgt tgttaaagca ctgagtaacc tttcacagtt
     1681 gcttttgctt catagttcaa aggatgaata tggattaaag gaaaatgatc acaagaccct
     1741 cgctgatgtc attcacaatc ttaatctgtg tgtatctaga aaaaaccaac aagtgggtcc
     1801 tgcacaagat gatcacgaaa gttattttga tggttccgct aaaaacactg tagaactaca
     1861 gggtgcctct ttgagggaca atgatgatct accgaaagat tataatatga ttcagaaaat
     1921 aaaaaggtta ctggatgaga atttagagta caaggaggac aaggatctat cttctgatac
     1981 tcttttgtac aaaaatctgt ggcttgaaac tgaagcagag ctgtgtgcct cgagctacag
     2041 agctcgtttt gagcgtatca agagagaaat gaacaaatct aaaccatcag tcccagatgt
     2101 atctgaagtt gcttctgaca aaaagaaagt ttcaacttcc aatttgtcac caattgctgc
     2161 caaactaatg catgaagctg ctgctagcaa tataacaaag acccatgaac aatatccatc
     2221 tttttcgggt gtcattgacc atatcgatga tgttgagaat acagtgatga cacgttttaa
     2281 tattttgaaa cgtcgtgaac agtctaatcc atttaacttg gaagagaaaa aacatgatga
     2341 tgatcaagaa tatgttggta atgaaattcc aagctctata gtggctaagg aaccccattg
     2401 gcaacagcat ctacctgacg atgcagttac gattcctact tatggtaacc agaggttaca
     2461 ttactcactt gccatggagg atgagaatgt tgaacacgca gttatggcta ggttgaatat
     2521 tttgaaatct cgaggtgagt ccagttctgt taatattgaa tgtgaacatc ttgaagatga
     2581 tcgtgctgaa gttgcaggta aagaaagtca gggttttggt gtagctgttg gacctcattt
     2641 taaacatctg gctggtaaag aagaggaagt ggcaccaggc tctggtggga caagcctgat
     2701 acataaccag ttcgagtctg ggtcatacac tacttgtggt ggatcgtccg actgggaata
     2761 tgtcatgaaa agatgagctt tcaaggaaca gagtctaaac tgatatgatt gttaatgtcc
     2821 ctttcagtct caggaggtac attgtatcaa gtttggtagt gtaattggca acatatatgt
     2881 gttcgagttg cattgtataa aggtggtttt tctttacctt gaaactttgt ataaagggga
     2941 atgtttttac ctttcaactc aggttatgta tgatgcataa tgagcaaact tatatacgat
     3001 aatctaatcg aagtatctat aacccttgga tttccgaact catcttaata ctttaca
//
LOCUS       XM_071830023            2998 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839848), transcript variant X3, mRNA.
ACCESSION   XM_071830023
VERSION     XM_071830023.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2998
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2998
                     /gene="LOC139839848"
                     /note="uncharacterized LOC139839848; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839848"
     CDS             62..2716
                     /gene="LOC139839848"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071686124.1"
                     /db_xref="GeneID:139839848"
                     /translation="MKLNQNSKLKTKTRYHHHKSPTDAEMTNLGYYFSSSSSSSNLSP
                     LAPPFTVERSNPNKLNSTSNLDFNFSSKSDELTTNSSSVWSQFHSSNASQGLDADSIR
                     IATVPDANSTTNPYYYFNMNMNSNSSVESGFQHENQHFFGARTKYPDAVNSSCTLSST
                     SQPNLINSQSPYNWTLDRDTINSPNTLNWSSMESSIKSGLEPVNQSDGHLFGVKRSPQ
                     PKTWNYVNDNNGSGSLFRDYMPSQVDYGLGLSGSARYSRQADGSQGKEDYLLGGMSDI
                     ARENNIGPSIILKSQDASFSSTNQGNVSSGFSDEQTITWNGGTSYFEKRPIMLDFSSG
                     YISPSITKSSPSIVIKPSVKVPPFSTRGAVSTNSTTIFNSNDDLFSHKPLKEKGHEAK
                     DKFLTSNQLSDQRDASNKSSTDGRLNFEFKASTNMEVPNIKSSKDSKFAANVSEHFDH
                     PNSSEDSPCWKGAPVRYSSSGSSSEADSSQHPMKKQQKINVVEPEMKIRSSDAVEDKT
                     MHVSVGNDDNLVPTEILDLNVVVKALSNLSQLLLLHSSKDEYGLKENDHKTLADVIHN
                     LNLCVSRKNQQVGPAQDDHESYFDGSAKNTVELQGASLRDNDDLPKDYNMIQKIKRLL
                     DENLEYKEDKDLSSDTLLYKNLWLETEAELCASSYRARFERIKREMNKSKPSVPDVSE
                     VASDKKKVSTSNLSPIAAKLMHEAAASNITKTHEQYPSFSGVIDHIDDVENTVMTRFN
                     ILKRREQSNPFNLEEKKHDDDQEYVGNEIPSSIVAKEPHWQQHLPANDAVTIPTYGNQ
                     RLHYSLAMEDENVEHAVMARLNILKSRGKESQGFGVAVGPHFKHLAGKEEEVAPGSGG
                     TSLIHNQFESGSYTTCGGSSDWEYVMKR"
ORIGIN      
        1 gcagaatata ataatggtgc attactgttt tttttactat taatagtaga aatcaaaatc
       61 aatgaaatta aatcaaaatt caaagttgaa aactaaaacc agataccatc atcacaagtc
      121 ccccactgac gctgaaatga caaatttagg gtattatttt tcatcatcat catcatcttc
      181 aaatttgtca ccattagcgc caccctttac tgttgaacga tctaacccta ataagctcaa
      241 ttcaacttca aacctagatt ttaatttcag tagcaaatca gatgaattaa ctaccaacag
      301 tagttccgtt tggtcccaat ttcactcttc aaatgcctca caaggtttag atgctgattc
      361 gattaggatc gcaaccgttc ctgatgctaa ttcaacaaca aatccttatt actattttaa
      421 tatgaatatg aattcgaatt ctagtgttga atcaggcttc caacacgaaa atcagcattt
      481 tttcggtgct cggactaaat atcctgatgc tgtaaactca tcgtgtactc ttagttcgac
      541 ttcgcagccg aacctgataa attcacaaag cccttacaat tggactttag atcgggacac
      601 tattaattca ccaaacactc ttaactggtc ttctatggaa tcgagtatta agtcagggtt
      661 agaacctgta aatcagtctg atggccattt gtttggtgta aaacggagtc cgcaacctaa
      721 aacatggaat tacgttaatg ataataacgg aagtgggagt ttgtttcgtg attacatgcc
      781 ttctcaagtt gattatggcc taggcttgtc aggatcagca agatatagta gacaagctga
      841 tggatcacaa ggaaaagaag attatttgct tggaggaatg tcagatattg ctagagaaaa
      901 caacatcggg ccttcaatta ttctaaagtc tcaagatgca tcattttctt caacaaatca
      961 aggcaatgtt tctagtggtt tttcggatga acaaacgatt acgtggaatg gcgggacatc
     1021 atattttgag aaaagaccaa tcatgcttga tttctctagt ggttacatat ctccatcaat
     1081 aacaaaatct tcaccttcta ttgtgataaa accttcagtc aaagttcctc ccttttcaac
     1141 tcggggtgca gtttctacaa acagtacaac aatatttaac agcaatgatg atctctttag
     1201 tcataaaccc ttgaaagaaa agggtcatga agccaaagat aagtttttaa cttcaaacca
     1261 actgagcgat cagagagatg catcgaacaa gagttctact gatggtcggt taaattttga
     1321 gttcaaagca agtacaaata tggaagttcc taatatcaaa agctctaaag attcaaaatt
     1381 tgctgcaaat gtttcagaac attttgatca tccgaattct tcagaagatt ctccatgttg
     1441 gaaaggagct cccgttcggt attcatcatc tgggtcctcc tcagaagcag attcatctca
     1501 gcatcctatg aaaaaacaac aaaaaattaa tgttgtggag cccgagatga aaatccgatc
     1561 aagtgatgca gtcgaggaca aaaccatgca tgtttctgtc ggaaatgatg ataatcttgt
     1621 accaactgaa atcttggatt tgaatgttgt tgttaaagca ctgagtaacc tttcacagtt
     1681 gcttttgctt catagttcaa aggatgaata tggattaaag gaaaatgatc acaagaccct
     1741 cgctgatgtc attcacaatc ttaatctgtg tgtatctaga aaaaaccaac aagtgggtcc
     1801 tgcacaagat gatcacgaaa gttattttga tggttccgct aaaaacactg tagaactaca
     1861 gggtgcctct ttgagggaca atgatgatct accgaaagat tataatatga ttcagaaaat
     1921 aaaaaggtta ctggatgaga atttagagta caaggaggac aaggatctat cttctgatac
     1981 tcttttgtac aaaaatctgt ggcttgaaac tgaagcagag ctgtgtgcct cgagctacag
     2041 agctcgtttt gagcgtatca agagagaaat gaacaaatct aaaccatcag tcccagatgt
     2101 atctgaagtt gcttctgaca aaaagaaagt ttcaacttcc aatttgtcac caattgctgc
     2161 caaactaatg catgaagctg ctgctagcaa tataacaaag acccatgaac aatatccatc
     2221 tttttcgggt gtcattgacc atatcgatga tgttgagaat acagtgatga cacgttttaa
     2281 tattttgaaa cgtcgtgaac agtctaatcc atttaacttg gaagagaaaa aacatgatga
     2341 tgatcaagaa tatgttggta atgaaattcc aagctctata gtggctaagg aaccccattg
     2401 gcaacagcat ctacctgcaa acgatgcagt tacgattcct acttatggta accagaggtt
     2461 acattactca cttgccatgg aggatgagaa tgttgaacac gcagttatgg ctaggttgaa
     2521 tattttgaaa tctcgaggta aagaaagtca gggttttggt gtagctgttg gacctcattt
     2581 taaacatctg gctggtaaag aagaggaagt ggcaccaggc tctggtggga caagcctgat
     2641 acataaccag ttcgagtctg ggtcatacac tacttgtggt ggatcgtccg actgggaata
     2701 tgtcatgaaa agatgagctt tcaaggaaca gagtctaaac tgatatgatt gttaatgtcc
     2761 ctttcagtct caggaggtac attgtatcaa gtttggtagt gtaattggca acatatatgt
     2821 gttcgagttg cattgtataa aggtggtttt tctttacctt gaaactttgt ataaagggga
     2881 atgtttttac ctttcaactc aggttatgta tgatgcataa tgagcaaact tatatacgat
     2941 aatctaatcg aagtatctat aacccttgga tttccgaact catcttaata ctttacaa
//
LOCUS       XM_071830024            2995 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839848), transcript variant X4, mRNA.
ACCESSION   XM_071830024
VERSION     XM_071830024.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2995
                     /gene="LOC139839848"
                     /note="uncharacterized LOC139839848; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839848"
     CDS             62..2713
                     /gene="LOC139839848"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071686125.1"
                     /db_xref="GeneID:139839848"
                     /translation="MKLNQNSKLKTKTRYHHHKSPTDAEMTNLGYYFSSSSSSSNLSP
                     LAPPFTVERSNPNKLNSTSNLDFNFSSKSDELTTNSSSVWSQFHSSNASQGLDADSIR
                     IATVPDANSTTNPYYYFNMNMNSNSSVESGFQHENQHFFGARTKYPDAVNSSCTLSST
                     SQPNLINSQSPYNWTLDRDTINSPNTLNWSSMESSIKSGLEPVNQSDGHLFGVKRSPQ
                     PKTWNYVNDNNGSGSLFRDYMPSQVDYGLGLSGSARYSRQADGSQGKEDYLLGGMSDI
                     ARENNIGPSIILKSQDASFSSTNQGNVSSGFSDEQTITWNGGTSYFEKRPIMLDFSSG
                     YISPSITKSSPSIVIKPSVKVPPFSTRGAVSTNSTTIFNSNDDLFSHKPLKEKGHEAK
                     DKFLTSNQLSDQRDASNKSSTDGRLNFEFKASTNMEVPNIKSSKDSKFAANVSEHFDH
                     PNSSEDSPCWKGAPVRYSSSGSSSEADSSQHPMKKQQKINVVEPEMKIRSSDAVEDKT
                     MHVSVGNDDNLVPTEILDLNVVVKALSNLSQLLLLHSSKDEYGLKENDHKTLADVIHN
                     LNLCVSRKNQQVGPAQDDHESYFDGSAKNTVELQGASLRDNDDLPKDYNMIQKIKRLL
                     DENLEYKEDKDLSSDTLLYKNLWLETEAELCASSYRARFERIKREMNKSKPSVPDVSE
                     VASDKKKVSTSNLSPIAAKLMHEAAASNITKTHEQYPSFSGVIDHIDDVENTVMTRFN
                     ILKRREQSNPFNLEEKKHDDDQEYVGNEIPSSIVAKEPHWQQHLPDDAVTIPTYGNQR
                     LHYSLAMEDENVEHAVMARLNILKSRGKESQGFGVAVGPHFKHLAGKEEEVAPGSGGT
                     SLIHNQFESGSYTTCGGSSDWEYVMKR"
ORIGIN      
        1 gcagaatata ataatggtgc attactgttt tttttactat taatagtaga aatcaaaatc
       61 aatgaaatta aatcaaaatt caaagttgaa aactaaaacc agataccatc atcacaagtc
      121 ccccactgac gctgaaatga caaatttagg gtattatttt tcatcatcat catcatcttc
      181 aaatttgtca ccattagcgc caccctttac tgttgaacga tctaacccta ataagctcaa
      241 ttcaacttca aacctagatt ttaatttcag tagcaaatca gatgaattaa ctaccaacag
      301 tagttccgtt tggtcccaat ttcactcttc aaatgcctca caaggtttag atgctgattc
      361 gattaggatc gcaaccgttc ctgatgctaa ttcaacaaca aatccttatt actattttaa
      421 tatgaatatg aattcgaatt ctagtgttga atcaggcttc caacacgaaa atcagcattt
      481 tttcggtgct cggactaaat atcctgatgc tgtaaactca tcgtgtactc ttagttcgac
      541 ttcgcagccg aacctgataa attcacaaag cccttacaat tggactttag atcgggacac
      601 tattaattca ccaaacactc ttaactggtc ttctatggaa tcgagtatta agtcagggtt
      661 agaacctgta aatcagtctg atggccattt gtttggtgta aaacggagtc cgcaacctaa
      721 aacatggaat tacgttaatg ataataacgg aagtgggagt ttgtttcgtg attacatgcc
      781 ttctcaagtt gattatggcc taggcttgtc aggatcagca agatatagta gacaagctga
      841 tggatcacaa ggaaaagaag attatttgct tggaggaatg tcagatattg ctagagaaaa
      901 caacatcggg ccttcaatta ttctaaagtc tcaagatgca tcattttctt caacaaatca
      961 aggcaatgtt tctagtggtt tttcggatga acaaacgatt acgtggaatg gcgggacatc
     1021 atattttgag aaaagaccaa tcatgcttga tttctctagt ggttacatat ctccatcaat
     1081 aacaaaatct tcaccttcta ttgtgataaa accttcagtc aaagttcctc ccttttcaac
     1141 tcggggtgca gtttctacaa acagtacaac aatatttaac agcaatgatg atctctttag
     1201 tcataaaccc ttgaaagaaa agggtcatga agccaaagat aagtttttaa cttcaaacca
     1261 actgagcgat cagagagatg catcgaacaa gagttctact gatggtcggt taaattttga
     1321 gttcaaagca agtacaaata tggaagttcc taatatcaaa agctctaaag attcaaaatt
     1381 tgctgcaaat gtttcagaac attttgatca tccgaattct tcagaagatt ctccatgttg
     1441 gaaaggagct cccgttcggt attcatcatc tgggtcctcc tcagaagcag attcatctca
     1501 gcatcctatg aaaaaacaac aaaaaattaa tgttgtggag cccgagatga aaatccgatc
     1561 aagtgatgca gtcgaggaca aaaccatgca tgtttctgtc ggaaatgatg ataatcttgt
     1621 accaactgaa atcttggatt tgaatgttgt tgttaaagca ctgagtaacc tttcacagtt
     1681 gcttttgctt catagttcaa aggatgaata tggattaaag gaaaatgatc acaagaccct
     1741 cgctgatgtc attcacaatc ttaatctgtg tgtatctaga aaaaaccaac aagtgggtcc
     1801 tgcacaagat gatcacgaaa gttattttga tggttccgct aaaaacactg tagaactaca
     1861 gggtgcctct ttgagggaca atgatgatct accgaaagat tataatatga ttcagaaaat
     1921 aaaaaggtta ctggatgaga atttagagta caaggaggac aaggatctat cttctgatac
     1981 tcttttgtac aaaaatctgt ggcttgaaac tgaagcagag ctgtgtgcct cgagctacag
     2041 agctcgtttt gagcgtatca agagagaaat gaacaaatct aaaccatcag tcccagatgt
     2101 atctgaagtt gcttctgaca aaaagaaagt ttcaacttcc aatttgtcac caattgctgc
     2161 caaactaatg catgaagctg ctgctagcaa tataacaaag acccatgaac aatatccatc
     2221 tttttcgggt gtcattgacc atatcgatga tgttgagaat acagtgatga cacgttttaa
     2281 tattttgaaa cgtcgtgaac agtctaatcc atttaacttg gaagagaaaa aacatgatga
     2341 tgatcaagaa tatgttggta atgaaattcc aagctctata gtggctaagg aaccccattg
     2401 gcaacagcat ctacctgacg atgcagttac gattcctact tatggtaacc agaggttaca
     2461 ttactcactt gccatggagg atgagaatgt tgaacacgca gttatggcta ggttgaatat
     2521 tttgaaatct cgaggtaaag aaagtcaggg ttttggtgta gctgttggac ctcattttaa
     2581 acatctggct ggtaaagaag aggaagtggc accaggctct ggtgggacaa gcctgataca
     2641 taaccagttc gagtctgggt catacactac ttgtggtgga tcgtccgact gggaatatgt
     2701 catgaaaaga tgagctttca aggaacagag tctaaactga tatgattgtt aatgtccctt
     2761 tcagtctcag gaggtacatt gtatcaagtt tggtagtgta attggcaaca tatatgtgtt
     2821 cgagttgcat tgtataaagg tggtttttct ttaccttgaa actttgtata aaggggaatg
     2881 tttttacctt tcaactcagg ttatgtatga tgcataatga gcaaacttat atacgataat
     2941 ctaatcgaag tatctataac ccttggattt ccgaactcat cttaatactt tacaa
//
LOCUS       XM_071830025            1312 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X1, mRNA.
ACCESSION   XM_071830025
VERSION     XM_071830025.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1312
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     CDS             771..1082
                     /gene="LOC139839850"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686126.1"
                     /db_xref="GeneID:139839850"
                     /translation="MLLRRFSNNNNSVERGLLLILDEHKSMERQFLFRTEFSHNKRLV
                     TSYKGFRHETLVMHCMLQIYTMETMLLKPASVKVYPCILQVAGAPGDDEENILNKQEL
                     K"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaaggattt aggcatgaga ccctagtgat gcattgtatg ttacagatct
      961 acacaatgga gacgatgttg ttaaagcctg catcagttaa agtatatccg tgtattcttc
     1021 aggtagctgg tgccccagga gatgacgaag agaacatttt gaacaaacaa gaactcaagt
     1081 agctaagaga ctaatagaga gtgattgtat ttggcatagt gctttatcgt tggtggctgg
     1141 gagggataca atcaaatttt gaagattaga ttacagatga tttagaatca acatgaaatg
     1201 aaatgtctgt atagtgatag aaaattcaaa ctgttgaaga ataaacagct cattctgtta
     1261 catgacactt tgattttttt ttcaaatttg caaattcatt actcgtattt ga
//
LOCUS       XR_011757097            1348 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X2, misc_RNA.
ACCESSION   XR_011757097
VERSION     XR_011757097.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1348
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1348
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X2"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 taatcgttgc ttatctgagt tttttattct aaatctccac cgatacagtt gttgttgatc
       61 ggagttttgg actctataag tttctacaga ttaagcaatt caatgaacgt ataaaggtca
      121 aaactacgga gtggtgtttg gctcatggct gatgactgac tcaacatcgt aaagttcttg
      181 tttttacact ccataacatc atagatgaaa ttagtactga ttttccatat ttttgctatt
      241 tgttggtaag tttgacagca gttataccta tctcagagat tatgtaatta taaagtccat
      301 tttgtagcta ctaaggtagt tgaaagttga aacatttgtt tcttaaacca gtgatttgaa
      361 agatgtatca gaagtgttta acgtctatgt tggtattaca tatggtatgg gtcttttgtc
      421 ttgctttctt taggtggttt tatttatttc atgatctctg caataacttg tgttattaga
      481 ttttagatgt aggaaagaag gtcgtgcatc ctatttgtgg aggacatatt agtggtatgt
      541 gcgggttctt tttcactgat ggcccgatat ataatgttga ggatgctaaa aagagtgata
      601 cgggtaaatt tgctaagttt ttatagagga atgttggaag aaggtgttta tttggctcct
      661 tctcagtttg aggccggttt actgggttga agcacatgca agatgatatt caacgaacga
      721 tagatgctgc tgagaaggtt ttcaaataac aataattcag ttgagcgggg tctgctgtta
      781 attctggacg aacacaagtc gatggaaaga caattcctgt ttcgtacaga gttcagtcat
      841 aacaaaagat tagtcacttc ttacaaagga tttaggcatg agaccctagt gatgcattgt
      901 atgttacaga tctacacaat ggagacgatg ttgttaaagc ctgcatcagt taaagtatat
      961 ccgtgtattc ttcaggtagc tggtgcccca ggagatgacg aagagaacat tttgaacaaa
     1021 caagaactca agtaaagtca tttttaacct ttttgtatta ctaatattgt tttgactatt
     1081 agagtatgat atgtgcttga aatgggatgt gcaggtagct aagagactaa tagagagtga
     1141 ttgtatttgg catagtgctt tatcgttggt ggctgggagg gatacaatca aattttgaag
     1201 attagattac agatgattta gaatcaacat gaaatgaaat gtctgtatag tgatagaaaa
     1261 ttcaaactgt tgaagaataa acagctcatt ctgttacatg acactttgat ttttttttca
     1321 aatttgcaaa ttcattactc gtatttga
//
LOCUS       XR_011757098            1313 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X3, misc_RNA.
ACCESSION   XR_011757098
VERSION     XR_011757098.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1313
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1313
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X3"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatctttga cagcagttat acctatctca
      241 gagattatgt aattataaag tccattttgt agctactaag gtagttgaaa gttgaaacat
      301 ttgtttctta aaccagtgat ttgaaagatg tatcagaagt gtttaacgtc tatgttggta
      361 ttacatatgg tatgggtctt ttgtcttgct ttctttaggt ggttttattt atttcatgat
      421 ctctgcaata acttgtgtta ttagatttta gatgtaggaa agaaggtcgt gcatcctatt
      481 tgtggaggac atattagtgg tatgtgcggg ttctttttca ctgatggccc gatatataat
      541 gttgaggatg ctaaaaagag tgatacgggt aaatttgcta agtttttata gaggaatgtt
      601 ggaagaaggt gtttatttgg ctccttctca gtttgaggcc ggtttactgg gttgaagcac
      661 atgcaagatg atattcaacg aacgatagat gctgctgaga aggttttcaa ataacaataa
      721 ttcagttgag cggggtctgc tgttaattct ggacgaacac aagtcgatgg aaagacaatt
      781 cctgtttcgt acagagttca gtcataacaa aagattagtc acttcttaca aaggatttag
      841 gcatgagacc ctagtgatgc attgtatgtt acagatctac acaatggaga cgatgttgtt
      901 aaagcctgca tcagttaaag tatatccgtg tattcttcag gtagctggtg ccccaggaga
      961 tgacgaagag aacattttga acaaacaaga actcaagtaa agtcattttt aacctttttg
     1021 tattactaat attgttttga ctattagagt atgatatgtg cttgaaatgg gatgtgcagg
     1081 tagctaagag actaatagag agtgattgta tttggcatag tgctttatcg ttggtggctg
     1141 ggagggatac aatcaaattt tgaagattag attacagatg atttagaatc aacatgaaat
     1201 gaaatgtctg tatagtgata gaaaattcaa actgttgaag aataaacagc tcattctgtt
     1261 acatgacact ttgatttttt tttcaaattt gcaaattcat tactcgtatt tga
//
LOCUS       XR_011757099            1320 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X4, misc_RNA.
ACCESSION   XR_011757099
VERSION     XR_011757099.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1320
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1320
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X4"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat gattttagat gtaggaaaga aggtcgtgca
      481 tcctatttgt ggaggacata ttagtggtat gtgcgggttc tttttcactg atggcccgat
      541 atataatgtt gaggatgcta aaaagagtga tacgggtaaa tttgctaagt ttttatagag
      601 gaatgttgga agaaggtgtt tatttggctc cttctcagtt tgaggccggt ttactgggtt
      661 gaagcacatg caagatgata ttcaacgaac gatagatgct gctgagaagg ttttcaaata
      721 acaataattc agttgagcgg ggtctgctgt taattctgga cgaacacaag tcgatggaaa
      781 gacaattcct gtttcgtaca gagttcagtc ataacaaaag attagtcact tcttacaaag
      841 gatttaggca tgagacccta gtgatgcatt gtatgttaca gatctacaca atggagacga
      901 tgttgttaaa gcctgcatca gttaaagtat atccgtgtat tcttcaggta gctggtgccc
      961 caggagatga cgaagagaac attttgaaca aacaagaact caagtaaagt catttttaac
     1021 ctttttgtat tactaatatt gttttgacta ttagagtatg atatgtgctt gaaatgggat
     1081 gtgcaggtag ctaagagact aatagagagt gattgtattt ggcatagtgc tttatcgttg
     1141 gtggctggga gggatacaat caaattttga agattagatt acagatgatt tagaatcaac
     1201 atgaaatgaa atgtctgtat agtgatagaa aattcaaact gttgaagaat aaacagctca
     1261 ttctgttaca tgacactttg attttttttt caaatttgca aattcattac tcgtatttga
//
LOCUS       XR_011757100            1332 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X5, misc_RNA.
ACCESSION   XR_011757100
VERSION     XR_011757100.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1332
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1332
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X5"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg tttgaggccg
      661 gtttactggg ttgaagcaca tgcaagatga tattcaacga acgatagatg ctgctgagaa
      721 ggttttcaaa taacaataat tcagttgagc ggggtctgct gttaattctg gacgaacaca
      781 agtcgatgga aagacaattc ctgtttcgta cagagttcag tcataacaaa agattagtca
      841 cttcttacaa aggatttagg catgagaccc tagtgatgca ttgtatgtta cagatctaca
      901 caatggagac gatgttgtta aagcctgcat cagttaaagt atatccgtgt attcttcagg
      961 tagctggtgc cccaggagat gacgaagaga acattttgaa caaacaagaa ctcaagtaaa
     1021 gtcattttta acctttttgt attactaata ttgttttgac tattagagta tgatatgtgc
     1081 ttgaaatggg atgtgcaggt agctaagaga ctaatagaga gtgattgtat ttggcatagt
     1141 gctttatcgt tggtggctgg gagggataca atcaaatttt gaagattaga ttacagatga
     1201 tttagaatca acatgaaatg aaatgtctgt atagtgatag aaaattcaaa ctgttgaaga
     1261 ataaacagct cattctgtta catgacactt tgattttttt ttcaaatttg caaattcatt
     1321 actcgtattt ga
//
LOCUS       XR_011757101            1311 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X6, misc_RNA.
ACCESSION   XR_011757101
VERSION     XR_011757101.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1311
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1311
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X6"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt gttttataga ggaatgttgg
      601 aagaaggtgt ttatttggct ccttctcagt ttgaggccgg tttactgggt tgaagcacat
      661 gcaagatgat attcaacgaa cgatagatgc tgctgagaag gttttcaaat aacaataatt
      721 cagttgagcg gggtctgctg ttaattctgg acgaacacaa gtcgatggaa agacaattcc
      781 tgtttcgtac agagttcagt cataacaaaa gattagtcac ttcttacaaa ggatttaggc
      841 atgagaccct agtgatgcat tgtatgttac agatctacac aatggagacg atgttgttaa
      901 agcctgcatc agttaaagta tatccgtgta ttcttcaggt agctggtgcc ccaggagatg
      961 acgaagagaa cattttgaac aaacaagaac tcaagtaaag tcatttttaa cctttttgta
     1021 ttactaatat tgttttgact attagagtat gatatgtgct tgaaatggga tgtgcaggta
     1081 gctaagagac taatagagag tgattgtatt tggcatagtg ctttatcgtt ggtggctggg
     1141 agggatacaa tcaaattttg aagattagat tacagatgat ttagaatcaa catgaaatga
     1201 aatgtctgta tagtgataga aaattcaaac tgttgaagaa taaacagctc attctgttac
     1261 atgacacttt gatttttttt tcaaatttgc aaattcatta ctcgtatttg a
//
LOCUS       XR_011757102            1303 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X7, misc_RNA.
ACCESSION   XR_011757102
VERSION     XR_011757102.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1303
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1303
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X7"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt gaggaatgtt ggaagaaggt
      601 gtttatttgg ctccttctca gtttgaggcc ggtttactgg gttgaagcac atgcaagatg
      661 atattcaacg aacgatagat gctgctgaga aggttttcaa ataacaataa ttcagttgag
      721 cggggtctgc tgttaattct ggacgaacac aagtcgatgg aaagacaatt cctgtttcgt
      781 acagagttca gtcataacaa aagattagtc acttcttaca aaggatttag gcatgagacc
      841 ctagtgatgc attgtatgtt acagatctac acaatggaga cgatgttgtt aaagcctgca
      901 tcagttaaag tatatccgtg tattcttcag gtagctggtg ccccaggaga tgacgaagag
      961 aacattttga acaaacaaga actcaagtaa agtcattttt aacctttttg tattactaat
     1021 attgttttga ctattagagt atgatatgtg cttgaaatgg gatgtgcagg tagctaagag
     1081 actaatagag agtgattgta tttggcatag tgctttatcg ttggtggctg ggagggatac
     1141 aatcaaattt tgaagattag attacagatg atttagaatc aacatgaaat gaaatgtctg
     1201 tatagtgata gaaaattcaa actgttgaag aataaacagc tcattctgtt acatgacact
     1261 ttgatttttt tttcaaattt gcaaattcat tactcgtatt tga
//
LOCUS       XR_011757103            1228 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X8, misc_RNA.
ACCESSION   XR_011757103
VERSION     XR_011757103.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1228
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1228
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X8"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat gattttagat gtaggaaaga aggtcgtgca
      481 tcctatttgt ggaggacata ttagtgagga atgttggaag aaggtgttta tttggctcct
      541 tctcagtttg aggccggttt actgggttga agcacatgca agatgatatt caacgaacga
      601 tagatgctgc tgagaaggtt ttcaaataac aataattcag ttgagcgggg tctgctgtta
      661 attctggacg aacacaagtc gatggaaaga caattcctgt ttcgtacaga gttcagtcat
      721 aacaaaagat tagtcacttc ttacaaagga tttaggcatg agaccctagt gatgcattgt
      781 atgttacaga tctacacaat ggagacgatg ttgttaaagc ctgcatcagt taaagtatat
      841 ccgtgtattc ttcaggtagc tggtgcccca ggagatgacg aagagaacat tttgaacaaa
      901 caagaactca agtaaagtca tttttaacct ttttgtatta ctaatattgt tttgactatt
      961 agagtatgat atgtgcttga aatgggatgt gcaggtagct aagagactaa tagagagtga
     1021 ttgtatttgg catagtgctt tatcgttggt ggctgggagg gatacaatca aattttgaag
     1081 attagattac agatgattta gaatcaacat gaaatgaaat gtctgtatag tgatagaaaa
     1141 ttcaaactgt tgaagaataa acagctcatt ctgttacatg acactttgat ttttttttca
     1201 aatttgcaaa ttcattactc gtatttga
//
LOCUS       XR_011757104             992 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X9, misc_RNA.
ACCESSION   XR_011757104
VERSION     XR_011757104.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..992
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..992
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X9"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcatttt agatgtagga aagaaggtcg
      241 tgcatcctat ttgtggagga catattagtg aggaatgttg gaagaaggtg tttatttggc
      301 tccttctcag tttgaggccg gtttactggg ttgaagcaca tgcaagatga tattcaacga
      361 acgatagatg ctgctgagaa ggttttcaaa taacaataat tcagttgagc ggggtctgct
      421 gttaattctg gacgaacaca agtcgatgga aagacaattc ctgtttcgta cagagttcag
      481 tcataacaaa agattagtca cttcttacaa aggatttagg catgagaccc tagtgatgca
      541 ttgtatgtta cagatctaca caatggagac gatgttgtta aagcctgcat cagttaaagt
      601 atatccgtgt attcttcagg tagctggtgc cccaggagat gacgaagaga acattttgaa
      661 caaacaagaa ctcaagtaaa gtcattttta acctttttgt attactaata ttgttttgac
      721 tattagagta tgatatgtgc ttgaaatggg atgtgcaggt agctaagaga ctaatagaga
      781 gtgattgtat ttggcatagt gctttatcgt tggtggctgg gagggataca atcaaatttt
      841 gaagattaga ttacagatga tttagaatca acatgaaatg aaatgtctgt atagtgatag
      901 aaaattcaaa ctgttgaaga ataaacagct cattctgtta catgacactt tgattttttt
      961 ttcaaatttg caaattcatt actcgtattt ga
//
LOCUS       XM_071830026            1291 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X10, mRNA.
ACCESSION   XM_071830026
VERSION     XM_071830026.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1291
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     CDS             771..1061
                     /gene="LOC139839850"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686127.1"
                     /db_xref="GeneID:139839850"
                     /translation="MLLRRFSNNNNSVERGLLLILDEHKSMERQFLFRTEFSHNKRLV
                     TSYKGFRHETLVMHCMLQIYTMETMLLKPASVKVAGAPGDDEENILNKQELK"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaaggattt aggcatgaga ccctagtgat gcattgtatg ttacagatct
      961 acacaatgga gacgatgttg ttaaagcctg catcagttaa agtagctggt gccccaggag
     1021 atgacgaaga gaacattttg aacaaacaag aactcaagta gctaagagac taatagagag
     1081 tgattgtatt tggcatagtg ctttatcgtt ggtggctggg agggatacaa tcaaattttg
     1141 aagattagat tacagatgat ttagaatcaa catgaaatga aatgtctgta tagtgataga
     1201 aaattcaaac tgttgaagaa taaacagctc attctgttac atgacacttt gatttttttt
     1261 tcaaatttgc aaattcatta ctcgtatttg a
//
LOCUS       XR_011757105            2072 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X11, misc_RNA.
ACCESSION   XR_011757105
VERSION     XR_011757105.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2072
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..2072
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X11"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaagctgtt aattttgaat ggaaggattt aggcatgaga ccctagtgat
      961 gcattgtatg ttacagatct acacaatgga gacgatgttg ttaaagcctg catcagttaa
     1021 agtaagttga aacccaattc ttttatgcct ccttaatttt tttaaaaatt gtgaagtaga
     1081 taaactgtaa tgttattaaa taactcatcg tcgtttaaat ttggcgagct ttttgttatc
     1141 atttttgaat ttgccctctt tacaggtata tccgtgtatt cttcaggtgt attcttcagg
     1201 ctgaacatga cttagcaact ctatttcgta tcctacttaa aacctataat gtgaaaaaat
     1261 acaaacttac agaccttttg tgtactctac tttcatgaag tgtgttatat tatttaacta
     1321 taccaaagtt attcattggc tagatcgatt ggtttcatga cttcctattc ttgctagaag
     1381 tgcttcttgg gttgttattt ttaggcaaca agtaatattg atagaagttc ttttctctag
     1441 ttacaaatga agctcagtac aaccactaac cactgtttat gctcttattt tcatttcatc
     1501 gcgacacgac aaaatgggcc gtctgggtgg gtttggtaac gagtcaaagt gattttttct
     1561 tgagtatgag ttgaattgac ccaaaatgcc tttttgtcca aaacctctat ttatattttt
     1621 tatatactga ttagtgtgtg aaatataatt gtgtttctaa accagtgttt tgaataatat
     1681 cattaaggaa tttataagca ttaggtcacg ggataccttg ttaggccaca ccgcatacat
     1741 gttagtaact ataagcatta aaacaacctt tgggatgtgc aggtagctgg tgccccagga
     1801 gatgacgaag agaacatttt gaacaaacaa gaactcaagt agctaagaga ctaatagaga
     1861 gtgattgtat ttggcatagt gctttatcgt tggtggctgg gagggataca atcaaatttt
     1921 gaagattaga ttacagatga tttagaatca acatgaaatg aaatgtctgt atagtgatag
     1981 aaaattcaaa ctgttgaaga ataaacagct cattctgtta catgacactt tgattttttt
     2041 ttcaaatttg caaattcatt actcgtattt ga
//
LOCUS       XR_011757106            2045 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X12, misc_RNA.
ACCESSION   XR_011757106
VERSION     XR_011757106.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2045
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..2045
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X12"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaaggcatg agaccctagt gatgcattgt atgttacaga tctacacaat
      961 ggagacgatg ttgttaaagc ctgcatcagt taaagtaagt tgaaacccaa ttcttttatg
     1021 cctccttaat ttttttaaaa attgtgaagt agataaactg taatgttatt aaataactca
     1081 tcgtcgttta aatttggcga gctttttgtt atcatttttg aatttgccct ctttacaggt
     1141 atatccgtgt attcttcagg tgtattcttc aggctgaaca tgacttagca actctatttc
     1201 gtatcctact taaaacctat aatgtgaaaa aatacaaact tacagacctt ttgtgtactc
     1261 tactttcatg aagtgtgtta tattatttaa ctataccaaa gttattcatt ggctagatcg
     1321 attggtttca tgacttccta ttcttgctag aagtgcttct tgggttgtta tttttaggca
     1381 acaagtaata ttgatagaag ttcttttctc tagttacaaa tgaagctcag tacaaccact
     1441 aaccactgtt tatgctctta ttttcatttc atcgcgacac gacaaaatgg gccgtctggg
     1501 tgggtttggt aacgagtcaa agtgattttt tcttgagtat gagttgaatt gacccaaaat
     1561 gcctttttgt ccaaaacctc tatttatatt ttttatatac tgattagtgt gtgaaatata
     1621 attgtgtttc taaaccagtg ttttgaataa tatcattaag gaatttataa gcattaggtc
     1681 acgggatacc ttgttaggcc acaccgcata catgttagta actataagca ttaaaacaac
     1741 ctttgggatg tgcaggtagc tggtgcccca ggagatgacg aagagaacat tttgaacaaa
     1801 caagaactca agtagctaag agactaatag agagtgattg tatttggcat agtgctttat
     1861 cgttggtggc tgggagggat acaatcaaat tttgaagatt agattacaga tgatttagaa
     1921 tcaacatgaa atgaaatgtc tgtatagtga tagaaaattc aaactgttga agaataaaca
     1981 gctcattctg ttacatgaca ctttgatttt tttttcaaat ttgcaaattc attactcgta
     2041 tttga
//
LOCUS       XR_011757107            2011 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X13, misc_RNA.
ACCESSION   XR_011757107
VERSION     XR_011757107.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2011
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..2011
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X13"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaagatcta cacaatggag acgatgttgt taaagcctgc atcagttaaa
      961 gtaagttgaa acccaattct tttatgcctc cttaattttt ttaaaaattg tgaagtagat
     1021 aaactgtaat gttattaaat aactcatcgt cgtttaaatt tggcgagctt tttgttatca
     1081 tttttgaatt tgccctcttt acaggtatat ccgtgtattc ttcaggtgta ttcttcaggc
     1141 tgaacatgac ttagcaactc tatttcgtat cctacttaaa acctataatg tgaaaaaata
     1201 caaacttaca gaccttttgt gtactctact ttcatgaagt gtgttatatt atttaactat
     1261 accaaagtta ttcattggct agatcgattg gtttcatgac ttcctattct tgctagaagt
     1321 gcttcttggg ttgttatttt taggcaacaa gtaatattga tagaagttct tttctctagt
     1381 tacaaatgaa gctcagtaca accactaacc actgtttatg ctcttatttt catttcatcg
     1441 cgacacgaca aaatgggccg tctgggtggg tttggtaacg agtcaaagtg attttttctt
     1501 gagtatgagt tgaattgacc caaaatgcct ttttgtccaa aacctctatt tatatttttt
     1561 atatactgat tagtgtgtga aatataattg tgtttctaaa ccagtgtttt gaataatatc
     1621 attaaggaat ttataagcat taggtcacgg gataccttgt taggccacac cgcatacatg
     1681 ttagtaacta taagcattaa aacaaccttt gggatgtgca ggtagctggt gccccaggag
     1741 atgacgaaga gaacattttg aacaaacaag aactcaagta gctaagagac taatagagag
     1801 tgattgtatt tggcatagtg ctttatcgtt ggtggctggg agggatacaa tcaaattttg
     1861 aagattagat tacagatgat ttagaatcaa catgaaatga aatgtctgta tagtgataga
     1921 aaattcaaac tgttgaagaa taaacagctc attctgttac atgacacttt gatttttttt
     1981 tcaaatttgc aaattcatta ctcgtatttg a
//
LOCUS       XR_011757108            1901 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X14, misc_RNA.
ACCESSION   XR_011757108
VERSION     XR_011757108.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1901
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1901
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X14"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaaggcatg agaccctagt gatgcattgt atgttacaga tctacacaat
      961 ggagacgatg ttgttaaagc ctgcatcagt taaagtatat ccgtgtattc ttcaggtgta
     1021 ttcttcaggc tgaacatgac ttagcaactc tatttcgtat cctacttaaa acctataatg
     1081 tgaaaaaata caaacttaca gaccttttgt gtactctact ttcatgaagt gtgttatatt
     1141 atttaactat accaaagtta ttcattggct agatcgattg gtttcatgac ttcctattct
     1201 tgctagaagt gcttcttggg ttgttatttt taggcaacaa gtaatattga tagaagttct
     1261 tttctctagt tacaaatgaa gctcagtaca accactaacc actgtttatg ctcttatttt
     1321 catttcatcg cgacacgaca aaatgggccg tctgggtggg tttggtaacg agtcaaagtg
     1381 attttttctt gagtatgagt tgaattgacc caaaatgcct ttttgtccaa aacctctatt
     1441 tatatttttt atatactgat tagtgtgtga aatataattg tgtttctaaa ccagtgtttt
     1501 gaataatatc attaaggaat ttataagcat taggtcacgg gataccttgt taggccacac
     1561 cgcatacatg ttagtaacta taagcattaa aacaaccttt gggatgtgca ggtagctggt
     1621 gccccaggag atgacgaaga gaacattttg aacaaacaag aactcaagta gctaagagac
     1681 taatagagag tgattgtatt tggcatagtg ctttatcgtt ggtggctggg agggatacaa
     1741 tcaaattttg aagattagat tacagatgat ttagaatcaa catgaaatga aatgtctgta
     1801 tagtgataga aaattcaaac tgttgaagaa taaacagctc attctgttac atgacacttt
     1861 gatttttttt tcaaatttgc aaattcatta ctcgtatttg a
//
LOCUS       XR_011757109            1867 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X15, misc_RNA.
ACCESSION   XR_011757109
VERSION     XR_011757109.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1867
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1867
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X15"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaagatcta cacaatggag acgatgttgt taaagcctgc atcagttaaa
      961 gtatatccgt gtattcttca ggtgtattct tcaggctgaa catgacttag caactctatt
     1021 tcgtatccta cttaaaacct ataatgtgaa aaaatacaaa cttacagacc ttttgtgtac
     1081 tctactttca tgaagtgtgt tatattattt aactatacca aagttattca ttggctagat
     1141 cgattggttt catgacttcc tattcttgct agaagtgctt cttgggttgt tatttttagg
     1201 caacaagtaa tattgataga agttcttttc tctagttaca aatgaagctc agtacaacca
     1261 ctaaccactg tttatgctct tattttcatt tcatcgcgac acgacaaaat gggccgtctg
     1321 ggtgggtttg gtaacgagtc aaagtgattt tttcttgagt atgagttgaa ttgacccaaa
     1381 atgccttttt gtccaaaacc tctatttata ttttttatat actgattagt gtgtgaaata
     1441 taattgtgtt tctaaaccag tgttttgaat aatatcatta aggaatttat aagcattagg
     1501 tcacgggata ccttgttagg ccacaccgca tacatgttag taactataag cattaaaaca
     1561 acctttggga tgtgcaggta gctggtgccc caggagatga cgaagagaac attttgaaca
     1621 aacaagaact caagtagcta agagactaat agagagtgat tgtatttggc atagtgcttt
     1681 atcgttggtg gctgggaggg atacaatcaa attttgaaga ttagattaca gatgatttag
     1741 aatcaacatg aaatgaaatg tctgtatagt gatagaaaat tcaaactgtt gaagaataaa
     1801 cagctcattc tgttacatga cactttgatt tttttttcaa atttgcaaat tcattactcg
     1861 tatttga
//
LOCUS       XR_011757110            1311 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X16, misc_RNA.
ACCESSION   XR_011757110
VERSION     XR_011757110.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1311
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1311
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X16"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaagctgtt aattttgaat ggaaggattt aggcatgaga ccctagtgat
      961 gcattgtatg ttacagatct acacaatgga gacgatgttg ttaaagcctg catcagttaa
     1021 agtagctggt gccccaggag atgacgaaga gaacattttg aacaaacaag aactcaagta
     1081 gctaagagac taatagagag tgattgtatt tggcatagtg ctttatcgtt ggtggctggg
     1141 agggatacaa tcaaattttg aagattagat tacagatgat ttagaatcaa catgaaatga
     1201 aatgtctgta tagtgataga aaattcaaac tgttgaagaa taaacagctc attctgttac
     1261 atgacacttt gatttttttt tcaaatttgc aaattcatta ctcgtatttg a
//
LOCUS       XR_011757111            1284 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X17, misc_RNA.
ACCESSION   XR_011757111
VERSION     XR_011757111.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1284
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1284
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X17"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaaggcatg agaccctagt gatgcattgt atgttacaga tctacacaat
      961 ggagacgatg ttgttaaagc ctgcatcagt taaagtagct ggtgccccag gagatgacga
     1021 agagaacatt ttgaacaaac aagaactcaa gtagctaaga gactaataga gagtgattgt
     1081 atttggcata gtgctttatc gttggtggct gggagggata caatcaaatt ttgaagatta
     1141 gattacagat gatttagaat caacatgaaa tgaaatgtct gtatagtgat agaaaattca
     1201 aactgttgaa gaataaacag ctcattctgt tacatgacac tttgattttt ttttcaaatt
     1261 tgcaaattca ttactcgtat ttga
//
LOCUS       XR_011757112            1250 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839850), transcript variant X18, misc_RNA.
ACCESSION   XR_011757112
VERSION     XR_011757112.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1250
                     /gene="LOC139839850"
                     /note="uncharacterized LOC139839850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839850"
     misc_RNA        1..1250
                     /gene="LOC139839850"
                     /product="uncharacterized protein, transcript variant X18"
                     /db_xref="GeneID:139839850"
ORIGIN      
        1 tttatccggt aacaattgac taaatctcca cctaatattt gttttctatc cggtaataat
       61 cgttgcttat ctgagttttt tattctaaat ctccaccgat acagttgttg ttgatcggag
      121 ttttggactc tataagatta agcaattcaa tgaacgtata aaggtcaaaa ctacggagtg
      181 gtgtttggct catggctgat gactgactca acatcgtaaa gttcttgttt ttacactcca
      241 taacatcata gatgaaatta gtactgattt tccatatttt tgctatttgt tggtaagttt
      301 gacagcagtt atacctatct cagagattat gtaattataa agtccatttt gtagctacta
      361 aggtagttga aagttgaaac atttgtttct taaaccagtg atttgaaaga tgtatcagaa
      421 gtgtttaacg tctatgttgg tattacatat ggtatgggtc ttttgtcttg ctttctttag
      481 gtggttttat ttatttcatg atctctgcaa taacttgtgt tattagattt tagatgtagg
      541 aaagaaggtc gtgcatccta tttgtggagg acatattagt ggtatgtgcg ggttcttttt
      601 cactgatggc ccgatatata atgttgagga tgctaaaaag agtgatacgg gtaaatttgc
      661 taagttttta tagaggaatg ttggaagaag gtgtttattt ggctccttct cagtttgagg
      721 ccggtttact gggttgaagc acatgcaaga tgatattcaa cgaacgatag atgctgctga
      781 gaaggttttc aaataacaat aattcagttg agcggggtct gctgttaatt ctggacgaac
      841 acaagtcgat ggaaagacaa ttcctgtttc gtacagagtt cagtcataac aaaagattag
      901 tcacttctta caaagatcta cacaatggag acgatgttgt taaagcctgc atcagttaaa
      961 gtagctggtg ccccaggaga tgacgaagag aacattttga acaaacaaga actcaagtag
     1021 ctaagagact aatagagagt gattgtattt ggcatagtgc tttatcgttg gtggctggga
     1081 gggatacaat caaattttga agattagatt acagatgatt tagaatcaac atgaaatgaa
     1141 atgtctgtat agtgatagaa aattcaaact gttgaagaat aaacagctca ttctgttaca
     1201 tgacactttg attttttttt caaatttgca aattcattac tcgtatttga
//
LOCUS       XR_011757113             230 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839851), ncRNA.
ACCESSION   XR_011757113
VERSION     XR_011757113.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..230
                     /gene="LOC139839851"
                     /note="uncharacterized LOC139839851; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839851"
     ncRNA           1..230
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839851"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839851"
ORIGIN      
        1 gagtgagaga gctccattaa aggaagaagg aggttgaatc gggtcttagt gcgagttcta
       61 aagtcgttca tctagtcgct agctacgtgg tgattgtgtt ggtacgttac attgaggttt
      121 tgcaagctcg ggtatctttt cacaagagat tttgaggttc ggttgtggac aagggtaagg
      181 acatcatctt ggattaaaga tctcgttgtt gttagggaac acttttggag
//
LOCUS       XM_071830027            4872 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X1, mRNA.
ACCESSION   XM_071830027
VERSION     XM_071830027.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4872
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4872
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686128.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 gtttggtttc ttgtctttat tggatatacg gacttattca tttataattg ttttttattg
     3601 aggcactgat gaaaatgtag tttacttcac cattgtcatg ttctcctaat aacttgtatc
     3661 agctgcaagt tgcaaggtca gattccaatg gaactcagtc acttcagata acagatgggg
     3721 ttacgtctga ctccatggct aaagcttcta aaacaacatt agctagtgtg atgaacaaga
     3781 tgagaaagca aggtcctata taactcaaca gaaagggcat tttaaagttt ctctgagact
     3841 gctgaaccta tgaagggaac ttcatctact gcactgctaa agagtctggg catgcggcta
     3901 taagtatacc ctacttatga atcttattgg tatttcgtat ttgtaattga aaggtaatga
     3961 tggaacatcc tattgcttct catctatctc aaggtttaca aaatttctac ttcagccagc
     4021 aacagcatcg atatagagtg cccggcaacc aacatcacta gactagaaca atcaaagact
     4081 cttaaatgcc caggaggagc tccagaaata caaagctgga aatgcccaga atgaatataa
     4141 aagaggtatt agctgctgga actccgacct tgaaaatctg aaagcccagg cttcgttggt
     4201 atgggctggt gtgattctca gttgtcgagg tgatcaccct ttaaatgcaa gttacaaccc
     4261 ccaacacggc gtctaagtac gatcaaaact agcctaggtc ttcatagtaa gtttattttt
     4321 gatatcttga ggtggtcttc attagtcatg ttttttttaa gtttaagtta taattttctg
     4381 ctttgtgcat accttacgga ttatgccgag cctatgtggg tgtgctattg gcttctcaat
     4441 tttaatggtt catcgggtca ttcttgtaat tgttaatctt tcttgcctca attcggaccc
     4501 tctcaccaat atgacaaagc tttcccgtcc gaggtttgaa gtcaacccga aacatctctt
     4561 gaggcttcac atctatggga tgttgtgatt ctcagtaggt gaggtgatta ccctctgcaa
     4621 gttacaaaat gttaatggct atgtgttcca gggtggttgg gaaaatgatg aatccgttga
     4681 ggaggaagct gcacgtgaag cggtggaaga ggctggagtt cgaggggatt taatggctct
     4741 ctttatatgc acagaaggag ctccagaaat acaatgctgg aaatgcattt ccaggtctta
     4801 ctaaagttcc atcattagtt ataaaggtgt caattttgat cctttaactt atgagtgggt
     4861 cgatttgggt tg
//
LOCUS       XM_071830028            4886 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X2, mRNA.
ACCESSION   XM_071830028
VERSION     XM_071830028.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4886
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1448..1750
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686129.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1523..>1711
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 gaaggctcta aacgtctgac agtaatgcta ctggtgaaaa gaactcgtgc atgaagcatc
       61 tatctgttgg gtgacgcttt caagaactac agtgggatct gcttcggcag tcaactcttc
      121 tgcctcatcc tttggttggg catgccttaa caacaccatt tcccacaata caatacagtt
      181 gtgtatttct tcaacataca gttgctctta tagtgaatct gtggaaggcg cccgagattg
      241 atatatcaga actctagagt ctctctcttc tcagcatgat caaactaaaa ggcagaagaa
      301 caaggggata caaaatcaaa atcacggaca gctgtatcta ataaacctga aatagtgcaa
      361 ctgggatcat gttcttactt tgttggaaga ctcatcaatg gatccacatc aagtgtcata
      421 tagttttgtc cgacaaatga gaggaggaga tggagacaat tattaaggtc taaataaatg
      481 ccagaagaaa gcttgatact gtgtctgatg gttacaaagg agagaaggca aatgtgacca
      541 ggatcagttg ttgggttcag gttggatagc ctcttgaaac ttgtcgacac gcgtgcaaag
      601 aacaatagaa ttactctcat gcattatctt tgtaagggaa cttcatctac tgcactgtta
      661 aagagtctga gcatgcggat ctcgtcactt cggataaccg atggggttac gtctgagtcc
      721 atgcctaaag cttctaaaac tacatttact agtgatgaac aagatgagaa agcaaggtcc
      781 aatataattc aacggaaagg ggggtttata gtttctctga gaatgttgaa cctgacaagg
      841 gaacttcatc tactgcactg ttaaagagtc cgagcatgcg ggtataagta taccctaatt
      901 atgaatctta ttcgtatttt gtaaaacgtt ctttcaatag acaaatttgt gttgatttca
      961 ctcgatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
     1021 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaaca
     1081 gaaagggggg cttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
     1141 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
     1201 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
     1261 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1321 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacggaaa ggggggctta
     1381 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1441 tccgagcatg cggatcccat tgacaggaat ggtggttgct gccttgtttt cagaatttac
     1501 ggtcaagatc cttttgtcac tagtgataga actactaaac ttctgttttt caactccaaa
     1561 gacgaacaaa actattcgat actacaagca ggctgaatgt gaactggtta aaattgatat
     1621 taattgccac gttcaaggtg acattgtgct ggagtgtatt aactttcaag atgatttgtc
     1681 ttgtgaaaag atgatgtatc gtgccatgtt caaacacaac atttataagg ttgaatatcg
     1741 tgatacttaa ttgtgaactg gctaaggatc cgtttcttgg ggacttcagg gctgagcttc
     1801 ttttcttcga tttggctggt ttggatgtgg agggtctccc tatagaagca ttttcaaagg
     1861 ttcaacaact gtttaacagt gttgattggc tagatcctaa aagtgatgca tcgcactaaa
     1921 tgttctcaac caaatagtcg gtcaacagtg cgttgttgaa gctagcaatc aagataaaga
     1981 cagcctcata ttattatcat tagtaataaa acgaaagcac aactcagata tggctaagga
     2041 gaaaccttca tgttctgata ttgatcacag aagggcatat aaccgtgaga tcatactttc
     2101 gaaggtcaaa atatcactga acgagttgat gggatcatgt tgtttacttt ggaagactca
     2161 acaatggatg ctgatcaatt aagtggacaa cctcataaag ctgtccgaca aatgagagga
     2221 gatgtagaca attaagggtt acaaaggaaa ctgggcaaat gtgaacagga agcttgtggg
     2281 ctgagacagt aactaatagt gatgaacaag atgagaaagc aaggtccaat atatttcatc
     2341 agaaagggtg tttcaaagta acgatggaac atcctattgc tcctcatctt tctcaagggg
     2401 atgctacatc catgcccaaa cgacccatta cccacccata gttctgcaga caagcaatct
     2461 ttaaagggtt ggaatatctt tctttttatc tctattataa ggagaaaata tcacgagtgg
     2521 tccttgtggt ttgtatcaaa aatcaccggt gatcgctgta ctcttttttt gtcaaggctg
     2581 gtccctgtga tttgcatttg aatcaatgaa gacttgaaag ataagatgca catcagcttg
     2641 aaaaacgtga gggcattata tatactttgt atccgaaact gaatagaaac ctctgaaatc
     2701 tttttacaca ctaattactt tcaaagaagt aatgccctcc tctacttggc atacatcttg
     2761 agcaatttat tcaatatagt ttggatatat ggaattttac gcattctcca tcgactttac
     2821 ttttgaattc tctgcccctt cctcctgctc ttttacaact gttatgatgt tctctttttg
     2881 aatcaaccaa cagaaatttt aaggtccaga tagaaattca ttggatttat cctctgttac
     2941 acactgtagg taatcactta tgagttagtt gaatttttac atgcgttgtt gcttactatt
     3001 ttaaaatgct aagacattta tatagataga ggactagatc catcggtaca caaacgttat
     3061 ggtttttttg gaggcactga tgaaaatgta gtttacttca cccattgtca tgttctccta
     3121 aaattttcat ttcagctgca agttgcaagg tcagattcca ctcgatctca gtcacttcgg
     3181 ataacagatg gggttacgtc cgagtccatg cctaaagctt ctataactac atttactagt
     3241 gatgaaaaag atgagaaagc aaggtccaat ataattcaac ggaaagggag ttttgaagtt
     3301 tctctaagaa tgttgaacct gacaaggtaa gttttgatga aaaaaataat tacttgattt
     3361 caaaatgcaa ttagatgata tccgtatatt tgaattactt tctgcttgct cgacccgttt
     3421 tctttttttt aaactgagag tgtagcccaa atgactcgtg aaagacaaaa tggtaaccca
     3481 aagcaacgca tttacaactg aagtgaaagg gcctcctctg cttggcatat atcttgagca
     3541 acttattcaa tatagtttgg tttcttgtct ttattggata tacggactta ttcatttata
     3601 attgtttttt attgaggcac tgatgaaaat gtagtttact tcaccattgt catgttctcc
     3661 taataacttg tatcagctgc aagttgcaag gtcagattcc aatggaactc agtcacttca
     3721 gataacagat ggggttacgt ctgactccat ggctaaagct tctaaaacaa cattagctag
     3781 tgtgatgaac aagatgagaa agcaaggtcc tatataactc aacagaaagg gcattttaaa
     3841 gtttctctga gactgctgaa cctatgaagg gaacttcatc tactgcactg ctaaagagtc
     3901 tgggcatgcg gctataagta taccctactt atgaatctta ttggtatttc gtatttgtaa
     3961 ttgaaaggta atgatggaac atcctattgc ttctcatcta tctcaaggtt tacaaaattt
     4021 ctacttcagc cagcaacagc atcgatatag agtgcccggc aaccaacatc actagactag
     4081 aacaatcaaa gactcttaaa tgcccaggag gagctccaga aatacaaagc tggaaatgcc
     4141 cagaatgaat ataaaagagg tattagctgc tggaactccg accttgaaaa tctgaaagcc
     4201 caggcttcgt tggtatgggc tggtgtgatt ctcagttgtc gaggtgatca ccctttaaat
     4261 gcaagttaca acccccaaca cggcgtctaa gtacgatcaa aactagccta ggtcttcata
     4321 gtaagtttat ttttgatatc ttgaggtggt cttcattagt catgtttttt ttaagtttaa
     4381 gttataattt tctgctttgt gcatacctta cggattatgc cgagcctatg tgggtgtgct
     4441 attggcttct caattttaat ggttcatcgg gtcattcttg taattgttaa tctttcttgc
     4501 ctcaattcgg accctctcac caatatgaca aagctttccc gtccgaggtt tgaagtcaac
     4561 ccgaaacatc tcttgaggct tcacatctat gggatgttgt gattctcagt aggtgaggtg
     4621 attaccctct gcaagttaca aaatgttaat ggctatgtgt tccagggtgg ttgggaaaat
     4681 gatgaatccg ttgaggagga agctgcacgt gaagcggtgg aagaggctgg agttcgaggg
     4741 gatttaatgg ctctctttat atgcacagaa ggagctccag aaatacaatg ctggaaatgc
     4801 atttccaggt cttactaaag ttccatcatt agttataaag gtgtcaattt tgatccttta
     4861 acttatgagt gggtcgattt gggttg
//
LOCUS       XM_071830029            4871 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X3, mRNA.
ACCESSION   XM_071830029
VERSION     XM_071830029.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4871
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4871
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1433..1735
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686130.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1508..>1696
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaaaagaac tcgtgcatga agcatctatc tgttgggtga cgctttcaag aactacagta
       61 tattttttac attgtggtgg gatctgcttc ggcagtcaac tcttctgcct catcctttgg
      121 ttgggcatgc cttaacaaca ccatttccca caatacaata cagttgtgta tttcttcaac
      181 atacagttgc tcttatagtg aatctgtgga aggcgcccga gattgatata tcagaactct
      241 agagtctctc tcttctcagc atgatcaaac taaaaggcag aagaacaagg ggatacaaaa
      301 tcaaaatcac ggacagctgt atctaataaa cctgaaatag tgcaactggg atcatgttct
      361 tactttgttg gaagactcat caatggatcc acatcaagtg tcatatagtt ttgtccgaca
      421 aatgagagga ggagatggag acaattatta aggtctaaat aaatgccaga agaaagcttg
      481 atactgtgtc tgatggttac aaaggagaga aggcaaatgt gaccaggatc agttgttggg
      541 ttcaggttgg atagcctctt gaaacttgtc gacacgcgtg caaagaacaa tagaattact
      601 ctcatgcatt atctttgtaa gggaacttca tctactgcac tgttaaagag tctgagcatg
      661 cggatctcgt cacttcggat aaccgatggg gttacgtctg agtccatgcc taaagcttct
      721 aaaactacat ttactagtga tgaacaagat gagaaagcaa ggtccaatat aattcaacgg
      781 aaaggggggt ttatagtttc tctgagaatg ttgaacctga caagggaact tcatctactg
      841 cactgttaaa gagtccgagc atgcgggtat aagtataccc taattatgaa tcttattcgt
      901 attttgtaaa acgttctttc aatagacaaa tttgtgttga tttcactcga tctcgtcact
      961 tcggataacc gatggggtta cgtctgagtc catgcctaaa gcttctaaaa ctacatttac
     1021 tagtgatgaa caagatgaga aagcaaggtc caatataatt caacagaaag gggggcttat
     1081 agtttctctg agaatgttga acctgacaag ggaacttcat ctactgcact gttaaagagt
     1141 ccgagcatgc gggtataagt ataccctaat tatgaatctt attcgtattt tgtaaaacgt
     1201 tctttcaata gacaaatttg tgttgatttc actcgatctc gtcacttcgg ataaccgatg
     1261 gggttacgtc tgagtccatg cctaaagctt ctaaaactac atttactagt gatgaacaag
     1321 atgagaaagc aaggtccaat ataattcaac ggaaaggggg gcttatagtt tctctgagaa
     1381 tgttgaacct gacaagggaa cttcatctac tgcactgtta aagagtccga gcatgcggat
     1441 cccattgaca ggaatggtgg ttgctgcctt gttttcagaa tttacggtca agatcctttt
     1501 gtcactagtg atagaactac taaacttctg tttttcaact ccaaagacga acaaaactat
     1561 tcgatactac aagcaggctg aatgtgaact ggttaaaatt gatattaatt gccacgttca
     1621 aggtgacatt gtgctggagt gtattaactt tcaagatgat ttgtcttgtg aaaagatgat
     1681 gtatcgtgcc atgttcaaac acaacattta taaggttgaa tatcgtgata cttaattgtg
     1741 aactggctaa ggatccgttt cttggggact tcagggctga gcttcttttc ttcgatttgg
     1801 ctggtttgga tgtggagggt ctccctatag aagcattttc aaaggttcaa caactgttta
     1861 acagtgttga ttggctagat cctaaaagtg atgcatcgca ctaaatgttc tcaaccaaat
     1921 agtcggtcaa cagtgcgttg ttgaagctag caatcaagat aaagacagcc tcatattatt
     1981 atcattagta ataaaacgaa agcacaactc agatatggct aaggagaaac cttcatgttc
     2041 tgatattgat cacagaaggg catataaccg tgagatcata ctttcgaagg tcaaaatatc
     2101 actgaacgag ttgatgggat catgttgttt actttggaag actcaacaat ggatgctgat
     2161 caattaagtg gacaacctca taaagctgtc cgacaaatga gaggagatgt agacaattaa
     2221 gggttacaaa ggaaactggg caaatgtgaa caggaagctt gtgggctgag acagtaacta
     2281 atagtgatga acaagatgag aaagcaaggt ccaatatatt tcatcagaaa gggtgtttca
     2341 aagtaacgat ggaacatcct attgctcctc atctttctca aggggatgct acatccatgc
     2401 ccaaacgacc cattacccac ccatagttct gcagacaagc aatctttaaa gggttggaat
     2461 atctttcttt ttatctctat tataaggaga aaatatcacg agtggtcctt gtggtttgta
     2521 tcaaaaatca ccggtgatcg ctgtactctt tttttgtcaa ggctggtccc tgtgatttgc
     2581 atttgaatca atgaagactt gaaagataag atgcacatca gcttgaaaaa cgtgagggca
     2641 ttatatatac tttgtatccg aaactgaata gaaacctctg aaatcttttt acacactaat
     2701 tactttcaaa gaagtaatgc cctcctctac ttggcataca tcttgagcaa tttattcaat
     2761 atagtttgga tatatggaat tttacgcatt ctccatcgac tttacttttg aattctctgc
     2821 cccttcctcc tgctctttta caactgttat gatgttctct ttttgaatca accaacagaa
     2881 attttaaggt ccagatagaa attcattgga tttatcctct gttacacact gtaggtaatc
     2941 acttatgagt tagttgaatt tttacatgcg ttgttgctta ctattttaaa atgctaagac
     3001 atttatatag atagaggact agatccatcg gtacacaaac gttatggttt ttttggaggc
     3061 actgatgaaa atgtagttta cttcacccat tgtcatgttc tcctaaaatt ttcatttcag
     3121 ctgcaagttg caaggtcaga ttccactcga tctcagtcac ttcggataac agatggggtt
     3181 acgtccgagt ccatgcctaa agcttctata actacattta ctagtgatga aaaagatgag
     3241 aaagcaaggt ccaatataat tcaacggaaa gggagttttg aagtttctct aagaatgttg
     3301 aacctgacaa ggtaagtttt gatgaaaaaa ataattactt gatttcaaaa tgcaattaga
     3361 tgatatccgt atatttgaat tactttctgc ttgctcgacc cgttttcttt tttttaaact
     3421 gagagtgtag cccaaatgac tcgtgaaaga caaaatggta acccaaagca acgcatttac
     3481 aactgaagtg aaagggcctc ctctgcttgg catatatctt gagcaactta ttcaatatag
     3541 tttggtttct tgtctttatt ggatatacgg acttattcat ttataattgt tttttattga
     3601 ggcactgatg aaaatgtagt ttacttcacc attgtcatgt tctcctaata acttgtatca
     3661 gctgcaagtt gcaaggtcag attccaatgg aactcagtca cttcagataa cagatggggt
     3721 tacgtctgac tccatggcta aagcttctaa aacaacatta gctagtgtga tgaacaagat
     3781 gagaaagcaa ggtcctatat aactcaacag aaagggcatt ttaaagtttc tctgagactg
     3841 ctgaacctat gaagggaact tcatctactg cactgctaaa gagtctgggc atgcggctat
     3901 aagtataccc tacttatgaa tcttattggt atttcgtatt tgtaattgaa aggtaatgat
     3961 ggaacatcct attgcttctc atctatctca aggtttacaa aatttctact tcagccagca
     4021 acagcatcga tatagagtgc ccggcaacca acatcactag actagaacaa tcaaagactc
     4081 ttaaatgccc aggaggagct ccagaaatac aaagctggaa atgcccagaa tgaatataaa
     4141 agaggtatta gctgctggaa ctccgacctt gaaaatctga aagcccaggc ttcgttggta
     4201 tgggctggtg tgattctcag ttgtcgaggt gatcaccctt taaatgcaag ttacaacccc
     4261 caacacggcg tctaagtacg atcaaaacta gcctaggtct tcatagtaag tttatttttg
     4321 atatcttgag gtggtcttca ttagtcatgt tttttttaag tttaagttat aattttctgc
     4381 tttgtgcata ccttacggat tatgccgagc ctatgtgggt gtgctattgg cttctcaatt
     4441 ttaatggttc atcgggtcat tcttgtaatt gttaatcttt cttgcctcaa ttcggaccct
     4501 ctcaccaata tgacaaagct ttcccgtccg aggtttgaag tcaacccgaa acatctcttg
     4561 aggcttcaca tctatgggat gttgtgattc tcagtaggtg aggtgattac cctctgcaag
     4621 ttacaaaatg ttaatggcta tgtgttccag ggtggttggg aaaatgatga atccgttgag
     4681 gaggaagctg cacgtgaagc ggtggaagag gctggagttc gaggggattt aatggctctc
     4741 tttatatgca cagaaggagc tccagaaata caatgctgga aatgcatttc caggtcttac
     4801 taaagttcca tcattagtta taaaggtgtc aattttgatc ctttaactta tgagtgggtc
     4861 gatttgggtt g
//
LOCUS       XM_071830030            4900 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X4, mRNA.
ACCESSION   XM_071830030
VERSION     XM_071830030.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4900
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4900
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686131.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agtggatgta gccaacattt
     1801 ttggatgtag cttcttttct tcgatttggc tggtttggat gtggagggtc tccctataga
     1861 agcattttca aaggttcaac aactgtttaa cagtgttgat tggctagatc ctaaaagtga
     1921 tgcatcgcac taaatgttct caaccaaata gtcggtcaac agtgcgttgt tgaagctagc
     1981 aatcaagata aagacagcct catattatta tcattagtaa taaaacgaaa gcacaactca
     2041 gatatggcta aggagaaacc ttcatgttct gatattgatc acagaagggc atataaccgt
     2101 gagatcatac tttcgaaggt caaaatatca ctgaacgagt tgatgggatc atgttgttta
     2161 ctttggaaga ctcaacaatg gatgctgatc aattaagtgg acaacctcat aaagctgtcc
     2221 gacaaatgag aggagatgta gacaattaag ggttacaaag gaaactgggc aaatgtgaac
     2281 aggaagcttg tgggctgaga cagtaactaa tagtgatgaa caagatgaga aagcaaggtc
     2341 caatatattt catcagaaag ggtgtttcaa agtaacgatg gaacatccta ttgctcctca
     2401 tctttctcaa ggggatgcta catccatgcc caaacgaccc attacccacc catagttctg
     2461 cagacaagca atctttaaag ggttggaata tctttctttt tatctctatt ataaggagaa
     2521 aatatcacga gtggtccttg tggtttgtat caaaaatcac cggtgatcgc tgtactcttt
     2581 ttttgtcaag gctggtccct gtgatttgca tttgaatcaa tgaagacttg aaagataaga
     2641 tgcacatcag cttgaaaaac gtgagggcat tatatatact ttgtatccga aactgaatag
     2701 aaacctctga aatcttttta cacactaatt actttcaaag aagtaatgcc ctcctctact
     2761 tggcatacat cttgagcaat ttattcaata tagtttggat atatggaatt ttacgcattc
     2821 tccatcgact ttacttttga attctctgcc ccttcctcct gctcttttac aactgttatg
     2881 atgttctctt tttgaatcaa ccaacagaaa ttttaaggtc cagatagaaa ttcattggat
     2941 ttatcctctg ttacacactg taggtaatca cttatgagtt agttgaattt ttacatgcgt
     3001 tgttgcttac tattttaaaa tgctaagaca tttatataga tagaggacta gatccatcgg
     3061 tacacaaacg ttatggtttt tttggaggca ctgatgaaaa tgtagtttac ttcacccatt
     3121 gtcatgttct cctaaaattt tcatttcagc tgcaagttgc aaggtcagat tccactcgat
     3181 ctcagtcact tcggataaca gatggggtta cgtccgagtc catgcctaaa gcttctataa
     3241 ctacatttac tagtgatgaa aaagatgaga aagcaaggtc caatataatt caacggaaag
     3301 ggagttttga agtttctcta agaatgttga acctgacaag gtaagttttg atgaaaaaaa
     3361 taattacttg atttcaaaat gcaattagat gatatccgta tatttgaatt actttctgct
     3421 tgctcgaccc gttttctttt ttttaaactg agagtgtagc ccaaatgact cgtgaaagac
     3481 aaaatggtaa cccaaagcaa cgcatttaca actgaagtga aagggcctcc tctgcttggc
     3541 atatatcttg agcaacttat tcaatatagt ttggtttctt gtctttattg gatatacgga
     3601 cttattcatt tataattgtt ttttattgag gcactgatga aaatgtagtt tacttcacca
     3661 ttgtcatgtt ctcctaataa cttgtatcag ctgcaagttg caaggtcaga ttccaatgga
     3721 actcagtcac ttcagataac agatggggtt acgtctgact ccatggctaa agcttctaaa
     3781 acaacattag ctagtgtgat gaacaagatg agaaagcaag gtcctatata actcaacaga
     3841 aagggcattt taaagtttct ctgagactgc tgaacctatg aagggaactt catctactgc
     3901 actgctaaag agtctgggca tgcggctata agtataccct acttatgaat cttattggta
     3961 tttcgtattt gtaattgaaa ggtaatgatg gaacatccta ttgcttctca tctatctcaa
     4021 ggtttacaaa atttctactt cagccagcaa cagcatcgat atagagtgcc cggcaaccaa
     4081 catcactaga ctagaacaat caaagactct taaatgccca ggaggagctc cagaaataca
     4141 aagctggaaa tgcccagaat gaatataaaa gaggtattag ctgctggaac tccgaccttg
     4201 aaaatctgaa agcccaggct tcgttggtat gggctggtgt gattctcagt tgtcgaggtg
     4261 atcacccttt aaatgcaagt tacaaccccc aacacggcgt ctaagtacga tcaaaactag
     4321 cctaggtctt catagtaagt ttatttttga tatcttgagg tggtcttcat tagtcatgtt
     4381 ttttttaagt ttaagttata attttctgct ttgtgcatac cttacggatt atgccgagcc
     4441 tatgtgggtg tgctattggc ttctcaattt taatggttca tcgggtcatt cttgtaattg
     4501 ttaatctttc ttgcctcaat tcggaccctc tcaccaatat gacaaagctt tcccgtccga
     4561 ggtttgaagt caacccgaaa catctcttga ggcttcacat ctatgggatg ttgtgattct
     4621 cagtaggtga ggtgattacc ctctgcaagt tacaaaatgt taatggctat gtgttccagg
     4681 gtggttggga aaatgatgaa tccgttgagg aggaagctgc acgtgaagcg gtggaagagg
     4741 ctggagttcg aggggattta atggctctct ttatatgcac agaaggagct ccagaaatac
     4801 aatgctggaa atgcatttcc aggtcttact aaagttccat cattagttat aaaggtgtca
     4861 attttgatcc tttaacttat gagtgggtcg atttgggttg
//
LOCUS       XM_071830031            4891 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X5, mRNA.
ACCESSION   XM_071830031
VERSION     XM_071830031.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4891
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686132.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agccaacatt tttggatgta
     1801 gcttcttttc ttcgatttgg ctggtttgga tgtggagggt ctccctatag aagcattttc
     1861 aaaggttcaa caactgttta acagtgttga ttggctagat cctaaaagtg atgcatcgca
     1921 ctaaatgttc tcaaccaaat agtcggtcaa cagtgcgttg ttgaagctag caatcaagat
     1981 aaagacagcc tcatattatt atcattagta ataaaacgaa agcacaactc agatatggct
     2041 aaggagaaac cttcatgttc tgatattgat cacagaaggg catataaccg tgagatcata
     2101 ctttcgaagg tcaaaatatc actgaacgag ttgatgggat catgttgttt actttggaag
     2161 actcaacaat ggatgctgat caattaagtg gacaacctca taaagctgtc cgacaaatga
     2221 gaggagatgt agacaattaa gggttacaaa ggaaactggg caaatgtgaa caggaagctt
     2281 gtgggctgag acagtaacta atagtgatga acaagatgag aaagcaaggt ccaatatatt
     2341 tcatcagaaa gggtgtttca aagtaacgat ggaacatcct attgctcctc atctttctca
     2401 aggggatgct acatccatgc ccaaacgacc cattacccac ccatagttct gcagacaagc
     2461 aatctttaaa gggttggaat atctttcttt ttatctctat tataaggaga aaatatcacg
     2521 agtggtcctt gtggtttgta tcaaaaatca ccggtgatcg ctgtactctt tttttgtcaa
     2581 ggctggtccc tgtgatttgc atttgaatca atgaagactt gaaagataag atgcacatca
     2641 gcttgaaaaa cgtgagggca ttatatatac tttgtatccg aaactgaata gaaacctctg
     2701 aaatcttttt acacactaat tactttcaaa gaagtaatgc cctcctctac ttggcataca
     2761 tcttgagcaa tttattcaat atagtttgga tatatggaat tttacgcatt ctccatcgac
     2821 tttacttttg aattctctgc cccttcctcc tgctctttta caactgttat gatgttctct
     2881 ttttgaatca accaacagaa attttaaggt ccagatagaa attcattgga tttatcctct
     2941 gttacacact gtaggtaatc acttatgagt tagttgaatt tttacatgcg ttgttgctta
     3001 ctattttaaa atgctaagac atttatatag atagaggact agatccatcg gtacacaaac
     3061 gttatggttt ttttggaggc actgatgaaa atgtagttta cttcacccat tgtcatgttc
     3121 tcctaaaatt ttcatttcag ctgcaagttg caaggtcaga ttccactcga tctcagtcac
     3181 ttcggataac agatggggtt acgtccgagt ccatgcctaa agcttctata actacattta
     3241 ctagtgatga aaaagatgag aaagcaaggt ccaatataat tcaacggaaa gggagttttg
     3301 aagtttctct aagaatgttg aacctgacaa ggtaagtttt gatgaaaaaa ataattactt
     3361 gatttcaaaa tgcaattaga tgatatccgt atatttgaat tactttctgc ttgctcgacc
     3421 cgttttcttt tttttaaact gagagtgtag cccaaatgac tcgtgaaaga caaaatggta
     3481 acccaaagca acgcatttac aactgaagtg aaagggcctc ctctgcttgg catatatctt
     3541 gagcaactta ttcaatatag tttggtttct tgtctttatt ggatatacgg acttattcat
     3601 ttataattgt tttttattga ggcactgatg aaaatgtagt ttacttcacc attgtcatgt
     3661 tctcctaata acttgtatca gctgcaagtt gcaaggtcag attccaatgg aactcagtca
     3721 cttcagataa cagatggggt tacgtctgac tccatggcta aagcttctaa aacaacatta
     3781 gctagtgtga tgaacaagat gagaaagcaa ggtcctatat aactcaacag aaagggcatt
     3841 ttaaagtttc tctgagactg ctgaacctat gaagggaact tcatctactg cactgctaaa
     3901 gagtctgggc atgcggctat aagtataccc tacttatgaa tcttattggt atttcgtatt
     3961 tgtaattgaa aggtaatgat ggaacatcct attgcttctc atctatctca aggtttacaa
     4021 aatttctact tcagccagca acagcatcga tatagagtgc ccggcaacca acatcactag
     4081 actagaacaa tcaaagactc ttaaatgccc aggaggagct ccagaaatac aaagctggaa
     4141 atgcccagaa tgaatataaa agaggtatta gctgctggaa ctccgacctt gaaaatctga
     4201 aagcccaggc ttcgttggta tgggctggtg tgattctcag ttgtcgaggt gatcaccctt
     4261 taaatgcaag ttacaacccc caacacggcg tctaagtacg atcaaaacta gcctaggtct
     4321 tcatagtaag tttatttttg atatcttgag gtggtcttca ttagtcatgt tttttttaag
     4381 tttaagttat aattttctgc tttgtgcata ccttacggat tatgccgagc ctatgtgggt
     4441 gtgctattgg cttctcaatt ttaatggttc atcgggtcat tcttgtaatt gttaatcttt
     4501 cttgcctcaa ttcggaccct ctcaccaata tgacaaagct ttcccgtccg aggtttgaag
     4561 tcaacccgaa acatctcttg aggcttcaca tctatgggat gttgtgattc tcagtaggtg
     4621 aggtgattac cctctgcaag ttacaaaatg ttaatggcta tgtgttccag ggtggttggg
     4681 aaaatgatga atccgttgag gaggaagctg cacgtgaagc ggtggaagag gctggagttc
     4741 gaggggattt aatggctctc tttatatgca cagaaggagc tccagaaata caatgctgga
     4801 aatgcatttc caggtcttac taaagttcca tcattagtta taaaggtgtc aattttgatc
     4861 ctttaactta tgagtgggtc gatttgggtt g
//
LOCUS       XM_071830032            5124 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X6, mRNA.
ACCESSION   XM_071830032
VERSION     XM_071830032.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5124
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5124
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1686..1988
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686133.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1761..>1949
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggtatgta gctcaactga ctcgtgaaac tcaaaatggt
      661 aacccaaagc gacccattta taaatgaagt gaaagggcct cctctgcttg gcatacgtct
      721 tgaacaattt attcaatata gtttgttttc ctgtcttcat tggatatatg gaattttacg
      781 cattctccat caactttact tttgaattct tcctcctgct cttttacaac tgctatgatg
      841 ttctcttttt gaatcaagca acagaaattt taagggaact tcatctactg cactgttaaa
      901 gagtctgagc atgcggatct cgtcacttcg gataaccgat ggggttacgt ctgagtccat
      961 gcctaaagct tctaaaacta catttactag tgatgaacaa gatgagaaag caaggtccaa
     1021 tataattcaa cggaaagggg ggtttatagt ttctctgaga atgttgaacc tgacaaggga
     1081 acttcatcta ctgcactgtt aaagagtccg agcatgcggg tataagtata ccctaattat
     1141 gaatcttatt cgtattttgt aaaacgttct ttcaatagac aaatttgtgt tgatttcact
     1201 cgatctcgtc acttcggata accgatgggg ttacgtctga gtccatgcct aaagcttcta
     1261 aaactacatt tactagtgat gaacaagatg agaaagcaag gtccaatata attcaacaga
     1321 aaggggggct tatagtttct ctgagaatgt tgaacctgac aagggaactt catctactgc
     1381 actgttaaag agtccgagca tgcgggtata agtataccct aattatgaat cttattcgta
     1441 ttttgtaaaa cgttctttca atagacaaat ttgtgttgat ttcactcgat ctcgtcactt
     1501 cggataaccg atggggttac gtctgagtcc atgcctaaag cttctaaaac tacatttact
     1561 agtgatgaac aagatgagaa agcaaggtcc aatataattc aacggaaagg ggggcttata
     1621 gtttctctga gaatgttgaa cctgacaagg gaacttcatc tactgcactg ttaaagagtc
     1681 cgagcatgcg gatcccattg acaggaatgg tggttgctgc cttgttttca gaatttacgg
     1741 tcaagatcct tttgtcacta gtgatagaac tactaaactt ctgtttttca actccaaaga
     1801 cgaacaaaac tattcgatac tacaagcagg ctgaatgtga actggttaaa attgatatta
     1861 attgccacgt tcaaggtgac attgtgctgg agtgtattaa ctttcaagat gatttgtctt
     1921 gtgaaaagat gatgtatcgt gccatgttca aacacaacat ttataaggtt gaatatcgtg
     1981 atacttaatt gtgaactggc taaggatccg tttcttgggg acttcagggc tgagcttctt
     2041 ttcttcgatt tggctggttt ggatgtggag ggtctcccta tagaagcatt ttcaaaggtt
     2101 caacaactgt ttaacagtgt tgattggcta gatcctaaaa gtgatgcatc gcactaaatg
     2161 ttctcaacca aatagtcggt caacagtgcg ttgttgaagc tagcaatcaa gataaagaca
     2221 gcctcatatt attatcatta gtaataaaac gaaagcacaa ctcagatatg gctaaggaga
     2281 aaccttcatg ttctgatatt gatcacagaa gggcatataa ccgtgagatc atactttcga
     2341 aggtcaaaat atcactgaac gagttgatgg gatcatgttg tttactttgg aagactcaac
     2401 aatggatgct gatcaattaa gtggacaacc tcataaagct gtccgacaaa tgagaggaga
     2461 tgtagacaat taagggttac aaaggaaact gggcaaatgt gaacaggaag cttgtgggct
     2521 gagacagtaa ctaatagtga tgaacaagat gagaaagcaa ggtccaatat atttcatcag
     2581 aaagggtgtt tcaaagtaac gatggaacat cctattgctc ctcatctttc tcaaggggat
     2641 gctacatcca tgcccaaacg acccattacc cacccatagt tctgcagaca agcaatcttt
     2701 aaagggttgg aatatctttc tttttatctc tattataagg agaaaatatc acgagtggtc
     2761 cttgtggttt gtatcaaaaa tcaccggtga tcgctgtact ctttttttgt caaggctggt
     2821 ccctgtgatt tgcatttgaa tcaatgaaga cttgaaagat aagatgcaca tcagcttgaa
     2881 aaacgtgagg gcattatata tactttgtat ccgaaactga atagaaacct ctgaaatctt
     2941 tttacacact aattactttc aaagaagtaa tgccctcctc tacttggcat acatcttgag
     3001 caatttattc aatatagttt ggatatatgg aattttacgc attctccatc gactttactt
     3061 ttgaattctc tgccccttcc tcctgctctt ttacaactgt tatgatgttc tctttttgaa
     3121 tcaaccaaca gaaattttaa ggtccagata gaaattcatt ggatttatcc tctgttacac
     3181 actgtaggta atcacttatg agttagttga atttttacat gcgttgttgc ttactatttt
     3241 aaaatgctaa gacatttata tagatagagg actagatcca tcggtacaca aacgttatgg
     3301 tttttttgga ggcactgatg aaaatgtagt ttacttcacc cattgtcatg ttctcctaaa
     3361 attttcattt cagctgcaag ttgcaaggtc agattccact cgatctcagt cacttcggat
     3421 aacagatggg gttacgtccg agtccatgcc taaagcttct ataactacat ttactagtga
     3481 tgaaaaagat gagaaagcaa ggtccaatat aattcaacgg aaagggagtt ttgaagtttc
     3541 tctaagaatg ttgaacctga caaggtaagt tttgatgaaa aaaataatta cttgatttca
     3601 aaatgcaatt agatgatatc cgtatatttg aattactttc tgcttgctcg acccgttttc
     3661 ttttttttaa actgagagtg tagcccaaat gactcgtgaa agacaaaatg gtaacccaaa
     3721 gcaacgcatt tacaactgaa gtgaaagggc ctcctctgct tggcatatat cttgagcaac
     3781 ttattcaata tagtttggtt tcttgtcttt attggatata cggacttatt catttataat
     3841 tgttttttat tgaggcactg atgaaaatgt agtttacttc accattgtca tgttctccta
     3901 ataacttgta tcagctgcaa gttgcaaggt cagattccaa tggaactcag tcacttcaga
     3961 taacagatgg ggttacgtct gactccatgg ctaaagcttc taaaacaaca ttagctagtg
     4021 tgatgaacaa gatgagaaag caaggtccta tataactcaa cagaaagggc attttaaagt
     4081 ttctctgaga ctgctgaacc tatgaaggga acttcatcta ctgcactgct aaagagtctg
     4141 ggcatgcggc tataagtata ccctacttat gaatcttatt ggtatttcgt atttgtaatt
     4201 gaaaggtaat gatggaacat cctattgctt ctcatctatc tcaaggttta caaaatttct
     4261 acttcagcca gcaacagcat cgatatagag tgcccggcaa ccaacatcac tagactagaa
     4321 caatcaaaga ctcttaaatg cccaggagga gctccagaaa tacaaagctg gaaatgccca
     4381 gaatgaatat aaaagaggta ttagctgctg gaactccgac cttgaaaatc tgaaagccca
     4441 ggcttcgttg gtatgggctg gtgtgattct cagttgtcga ggtgatcacc ctttaaatgc
     4501 aagttacaac ccccaacacg gcgtctaagt acgatcaaaa ctagcctagg tcttcatagt
     4561 aagtttattt ttgatatctt gaggtggtct tcattagtca tgtttttttt aagtttaagt
     4621 tataattttc tgctttgtgc ataccttacg gattatgccg agcctatgtg ggtgtgctat
     4681 tggcttctca attttaatgg ttcatcgggt cattcttgta attgttaatc tttcttgcct
     4741 caattcggac cctctcacca atatgacaaa gctttcccgt ccgaggtttg aagtcaaccc
     4801 gaaacatctc ttgaggcttc acatctatgg gatgttgtga ttctcagtag gtgaggtgat
     4861 taccctctgc aagttacaaa atgttaatgg ctatgtgttc cagggtggtt gggaaaatga
     4921 tgaatccgtt gaggaggaag ctgcacgtga agcggtggaa gaggctggag ttcgagggga
     4981 tttaatggct ctctttatat gcacagaagg agctccagaa atacaatgct ggaaatgcat
     5041 ttccaggtct tactaaagtt ccatcattag ttataaaggt gtcaattttg atcctttaac
     5101 ttatgagtgg gtcgatttgg gttg
//
LOCUS       XM_071830034            4753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X7, mRNA.
ACCESSION   XM_071830034
VERSION     XM_071830034.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4753
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686135.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca agcccaaatg actcgtgaaa gacaaaatgg taacccaaag caacgcattt
     3361 acaactgaag tgaaagggcc tcctctgctt ggcatatatc ttgagcaact tattcaatat
     3421 agtttggttt cttgtcttta ttggatatac ggacttattc atttataatt gttttttatt
     3481 gaggcactga tgaaaatgta gtttacttca ccattgtcat gttctcctaa taacttgtat
     3541 cagctgcaag ttgcaaggtc agattccaat ggaactcagt cacttcagat aacagatggg
     3601 gttacgtctg actccatggc taaagcttct aaaacaacat tagctagtgt gatgaacaag
     3661 atgagaaagc aaggtcctat ataactcaac agaaagggca ttttaaagtt tctctgagac
     3721 tgctgaacct atgaagggaa cttcatctac tgcactgcta aagagtctgg gcatgcggct
     3781 ataagtatac cctacttatg aatcttattg gtatttcgta tttgtaattg aaaggtaatg
     3841 atggaacatc ctattgcttc tcatctatct caaggtttac aaaatttcta cttcagccag
     3901 caacagcatc gatatagagt gcccggcaac caacatcact agactagaac aatcaaagac
     3961 tcttaaatgc ccaggaggag ctccagaaat acaaagctgg aaatgcccag aatgaatata
     4021 aaagaggtat tagctgctgg aactccgacc ttgaaaatct gaaagcccag gcttcgttgg
     4081 tatgggctgg tgtgattctc agttgtcgag gtgatcaccc tttaaatgca agttacaacc
     4141 cccaacacgg cgtctaagta cgatcaaaac tagcctaggt cttcatagta agtttatttt
     4201 tgatatcttg aggtggtctt cattagtcat gtttttttta agtttaagtt ataattttct
     4261 gctttgtgca taccttacgg attatgccga gcctatgtgg gtgtgctatt ggcttctcaa
     4321 ttttaatggt tcatcgggtc attcttgtaa ttgttaatct ttcttgcctc aattcggacc
     4381 ctctcaccaa tatgacaaag ctttcccgtc cgaggtttga agtcaacccg aaacatctct
     4441 tgaggcttca catctatggg atgttgtgat tctcagtagg tgaggtgatt accctctgca
     4501 agttacaaaa tgttaatggc tatgtgttcc agggtggttg ggaaaatgat gaatccgttg
     4561 aggaggaagc tgcacgtgaa gcggtggaag aggctggagt tcgaggggat ttaatggctc
     4621 tctttatatg cacagaagga gctccagaaa tacaatgctg gaaatgcatt tccaggtctt
     4681 actaaagttc catcattagt tataaaggtg tcaattttga tcctttaact tatgagtggg
     4741 tcgatttggg ttg
//
LOCUS       XM_071830035            4686 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X8, mRNA.
ACCESSION   XM_071830035
VERSION     XM_071830035.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4686
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4686
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686136.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtagctgca
     2941 agttgcaagg tcagattcca ctcgatctca gtcacttcgg ataacagatg gggttacgtc
     3001 cgagtccatg cctaaagctt ctataactac atttactagt gatgaaaaag atgagaaagc
     3061 aaggtccaat ataattcaac ggaaagggag ttttgaagtt tctctaagaa tgttgaacct
     3121 gacaaggtaa gttttgatga aaaaaataat tacttgattt caaaatgcaa ttagatgata
     3181 tccgtatatt tgaattactt tctgcttgct cgacccgttt tctttttttt aaactgagag
     3241 tgtagcccaa atgactcgtg aaagacaaaa tggtaaccca aagcaacgca tttacaactg
     3301 aagtgaaagg gcctcctctg cttggcatat atcttgagca acttattcaa tatagtttgg
     3361 tttcttgtct ttattggata tacggactta ttcatttata attgtttttt attgaggcac
     3421 tgatgaaaat gtagtttact tcaccattgt catgttctcc taataacttg tatcagctgc
     3481 aagttgcaag gtcagattcc aatggaactc agtcacttca gataacagat ggggttacgt
     3541 ctgactccat ggctaaagct tctaaaacaa cattagctag tgtgatgaac aagatgagaa
     3601 agcaaggtcc tatataactc aacagaaagg gcattttaaa gtttctctga gactgctgaa
     3661 cctatgaagg gaacttcatc tactgcactg ctaaagagtc tgggcatgcg gctataagta
     3721 taccctactt atgaatctta ttggtatttc gtatttgtaa ttgaaaggta atgatggaac
     3781 atcctattgc ttctcatcta tctcaaggtt tacaaaattt ctacttcagc cagcaacagc
     3841 atcgatatag agtgcccggc aaccaacatc actagactag aacaatcaaa gactcttaaa
     3901 tgcccaggag gagctccaga aatacaaagc tggaaatgcc cagaatgaat ataaaagagg
     3961 tattagctgc tggaactccg accttgaaaa tctgaaagcc caggcttcgt tggtatgggc
     4021 tggtgtgatt ctcagttgtc gaggtgatca ccctttaaat gcaagttaca acccccaaca
     4081 cggcgtctaa gtacgatcaa aactagccta ggtcttcata gtaagtttat ttttgatatc
     4141 ttgaggtggt cttcattagt catgtttttt ttaagtttaa gttataattt tctgctttgt
     4201 gcatacctta cggattatgc cgagcctatg tgggtgtgct attggcttct caattttaat
     4261 ggttcatcgg gtcattcttg taattgttaa tctttcttgc ctcaattcgg accctctcac
     4321 caatatgaca aagctttccc gtccgaggtt tgaagtcaac ccgaaacatc tcttgaggct
     4381 tcacatctat gggatgttgt gattctcagt aggtgaggtg attaccctct gcaagttaca
     4441 aaatgttaat ggctatgtgt tccagggtgg ttgggaaaat gatgaatccg ttgaggagga
     4501 agctgcacgt gaagcggtgg aagaggctgg agttcgaggg gatttaatgg ctctctttat
     4561 atgcacagaa ggagctccag aaatacaatg ctggaaatgc atttccaggt cttactaaag
     4621 ttccatcatt agttataaag gtgtcaattt tgatccttta acttatgagt gggtcgattt
     4681 gggttg
//
LOCUS       XM_071830036            4682 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X9, mRNA.
ACCESSION   XM_071830036
VERSION     XM_071830036.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4682
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4682
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686137.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tctgcaagtt
     2941 gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt tacgtccgag
     3001 tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga gaaagcaagg
     3061 tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt gaacctgaca
     3121 aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag atgatatccg
     3181 tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac tgagagtgta
     3241 gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta caactgaagt
     3301 gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata gtttggtttc
     3361 ttgtctttat tggatatacg gacttattca tttataattg ttttttattg aggcactgat
     3421 gaaaatgtag tttacttcac cattgtcatg ttctcctaat aacttgtatc agctgcaagt
     3481 tgcaaggtca gattccaatg gaactcagtc acttcagata acagatgggg ttacgtctga
     3541 ctccatggct aaagcttcta aaacaacatt agctagtgtg atgaacaaga tgagaaagca
     3601 aggtcctata taactcaaca gaaagggcat tttaaagttt ctctgagact gctgaaccta
     3661 tgaagggaac ttcatctact gcactgctaa agagtctggg catgcggcta taagtatacc
     3721 ctacttatga atcttattgg tatttcgtat ttgtaattga aaggtaatga tggaacatcc
     3781 tattgcttct catctatctc aaggtttaca aaatttctac ttcagccagc aacagcatcg
     3841 atatagagtg cccggcaacc aacatcacta gactagaaca atcaaagact cttaaatgcc
     3901 caggaggagc tccagaaata caaagctgga aatgcccaga atgaatataa aagaggtatt
     3961 agctgctgga actccgacct tgaaaatctg aaagcccagg cttcgttggt atgggctggt
     4021 gtgattctca gttgtcgagg tgatcaccct ttaaatgcaa gttacaaccc ccaacacggc
     4081 gtctaagtac gatcaaaact agcctaggtc ttcatagtaa gtttattttt gatatcttga
     4141 ggtggtcttc attagtcatg ttttttttaa gtttaagtta taattttctg ctttgtgcat
     4201 accttacgga ttatgccgag cctatgtggg tgtgctattg gcttctcaat tttaatggtt
     4261 catcgggtca ttcttgtaat tgttaatctt tcttgcctca attcggaccc tctcaccaat
     4321 atgacaaagc tttcccgtcc gaggtttgaa gtcaacccga aacatctctt gaggcttcac
     4381 atctatggga tgttgtgatt ctcagtaggt gaggtgatta ccctctgcaa gttacaaaat
     4441 gttaatggct atgtgttcca gggtggttgg gaaaatgatg aatccgttga ggaggaagct
     4501 gcacgtgaag cggtggaaga ggctggagtt cgaggggatt taatggctct ctttatatgc
     4561 acagaaggag ctccagaaat acaatgctgg aaatgcattt ccaggtctta ctaaagttcc
     4621 atcattagtt ataaaggtgt caattttgat cctttaactt atgagtgggt cgatttgggt
     4681 tg
//
LOCUS       XM_071830037            4659 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X10, mRNA.
ACCESSION   XM_071830037
VERSION     XM_071830037.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4659
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4659
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686138.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 gtttggtttc ttgtctttat tggatatacg gacttattca tttataattg ttttttattg
     3601 aggcactgat gaaaatgtag tttacttcac cattgtcatg ttctcctaat aacttgtatc
     3661 agctgcaagt tgcaaggtca gattccaatg gaactcagtc acttcagata acagatgggg
     3721 ttacgtctga ctccatggct aaagcttcta aaacaacatt agctagtgtg atgaacaaga
     3781 tgagaaagca aggtcctata taactcaaca gaaagggcat tttaaagttt ctctgagact
     3841 gctgaaccta tgaagggaac ttcatctact gcactgctaa agagtctggg catgcggcta
     3901 taagtatacc ctacttatga atcttattgg tatttcgtat ttgtaattga aaggtaatga
     3961 tggaacatcc tattgcttct catctatctc aaggtttaca aaatttctac ttcagccagc
     4021 aacagcatcg atatagagtg cccggcaacc aacatcacta gactagaaca atcaaagact
     4081 cttaaatgcc caggaggagc tccagaaata caaagctgga aatgcccaga atgaatataa
     4141 aagaggtatt agctgctgga actccgacct tgaaaatctg aaagcccagg cttcgttggt
     4201 atgggctggt gtgattctca gttgtcgagg tgatcaccct ttaaatgcaa gttacaaccc
     4261 ccaacacggc gtctaagtac gatcaaaact agcctaggtc ttcatacttt cccgtccgag
     4321 gtttgaagtc aacccgaaac atctcttgag gcttcacatc tatgggatgt tgtgattctc
     4381 agtaggtgag gtgattaccc tctgcaagtt acaaaatgtt aatggctatg tgttccaggg
     4441 tggttgggaa aatgatgaat ccgttgagga ggaagctgca cgtgaagcgg tggaagaggc
     4501 tggagttcga ggggatttaa tggctctctt tatatgcaca gaaggagctc cagaaataca
     4561 atgctggaaa tgcatttcca ggtcttacta aagttccatc attagttata aaggtgtcaa
     4621 ttttgatcct ttaacttatg agtgggtcga tttgggttg
//
LOCUS       XM_071830038            4750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X11, mRNA.
ACCESSION   XM_071830038
VERSION     XM_071830038.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4750
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686139.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 ctgcaagttg caaggtcaga ttccaatgga actcagtcac ttcagataac agatggggtt
     3601 acgtctgact ccatggctaa agcttctaaa acaacattag ctagtgtgat gaacaagatg
     3661 agaaagcaag gtcctatata actcaacaga aagggcattt taaagtttct ctgagactgc
     3721 tgaacctatg aagggaactt catctactgc actgctaaag agtctgggca tgcggctata
     3781 agtataccct acttatgaat cttattggta tttcgtattt gtaattgaaa ggtaatgatg
     3841 gaacatccta ttgcttctca tctatctcaa ggtttacaaa atttctactt cagccagcaa
     3901 cagcatcgat atagagtgcc cggcaaccaa catcactaga ctagaacaat caaagactct
     3961 taaatgccca ggaggagctc cagaaataca aagctggaaa tgcccagaat gaatataaaa
     4021 gaggtattag ctgctggaac tccgaccttg aaaatctgaa agcccaggct tcgttggtat
     4081 gggctggtgt gattctcagt tgtcgaggtg atcacccttt aaatgcaagt tacaaccccc
     4141 aacacggcgt ctaagtacga tcaaaactag cctaggtctt catagtaagt ttatttttga
     4201 tatcttgagg tggtcttcat tagtcatgtt ttttttaagt ttaagttata attttctgct
     4261 ttgtgcatac cttacggatt atgccgagcc tatgtgggtg tgctattggc ttctcaattt
     4321 taatggttca tcgggtcatt cttgtaattg ttaatctttc ttgcctcaat tcggaccctc
     4381 tcaccaatat gacaaagctt tcccgtccga ggtttgaagt caacccgaaa catctcttga
     4441 ggcttcacat ctatgggatg ttgtgattct cagtaggtga ggtgattacc ctctgcaagt
     4501 tacaaaatgt taatggctat gtgttccagg gtggttggga aaatgatgaa tccgttgagg
     4561 aggaagctgc acgtgaagcg gtggaagagg ctggagttcg aggggattta atggctctct
     4621 ttatatgcac agaaggagct ccagaaatac aatgctggaa atgcatttcc aggtcttact
     4681 aaagttccat cattagttat aaaggtgtca attttgatcc tttaacttat gagtgggtcg
     4741 atttgggttg
//
LOCUS       XM_071830039            4405 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X12, mRNA.
ACCESSION   XM_071830039
VERSION     XM_071830039.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4405
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686140.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttctgcaa gttgcaaggt cagattccac tcgatctcag tcacttcgga
     2701 taacagatgg ggttacgtcc gagtccatgc ctaaagcttc tataactaca tttactagtg
     2761 atgaaaaaga tgagaaagca aggtccaata taattcaacg gaaagggagt tttgaagttt
     2821 ctctaagaat gttgaacctg acaaggtaag ttttgatgaa aaaaataatt acttgatttc
     2881 aaaatgcaat tagatgatat ccgtatattt gaattacttt ctgcttgctc gacccgtttt
     2941 ctttttttta aactgagagt gtagcccaaa tgactcgtga aagacaaaat ggtaacccaa
     3001 agcaacgcat ttacaactga agtgaaaggg cctcctctgc ttggcatata tcttgagcaa
     3061 cttattcaat atagtttggt ttcttgtctt tattggatat acggacttat tcatttataa
     3121 ttgtttttta ttgaggcact gatgaaaatg tagtttactt caccattgtc atgttctcct
     3181 aataacttgt atcagctgca agttgcaagg tcagattcca atggaactca gtcacttcag
     3241 ataacagatg gggttacgtc tgactccatg gctaaagctt ctaaaacaac attagctagt
     3301 gtgatgaaca agatgagaaa gcaaggtcct atataactca acagaaaggg cattttaaag
     3361 tttctctgag actgctgaac ctatgaaggg aacttcatct actgcactgc taaagagtct
     3421 gggcatgcgg ctataagtat accctactta tgaatcttat tggtatttcg tatttgtaat
     3481 tgaaaggtaa tgatggaaca tcctattgct tctcatctat ctcaaggttt acaaaatttc
     3541 tacttcagcc agcaacagca tcgatataga gtgcccggca accaacatca ctagactaga
     3601 acaatcaaag actcttaaat gcccaggagg agctccagaa atacaaagct ggaaatgccc
     3661 agaatgaata taaaagaggt attagctgct ggaactccga ccttgaaaat ctgaaagccc
     3721 aggcttcgtt ggtatgggct ggtgtgattc tcagttgtcg aggtgatcac cctttaaatg
     3781 caagttacaa cccccaacac ggcgtctaag tacgatcaaa actagcctag gtcttcatag
     3841 taagtttatt tttgatatct tgaggtggtc ttcattagtc atgttttttt taagtttaag
     3901 ttataatttt ctgctttgtg cataccttac ggattatgcc gagcctatgt gggtgtgcta
     3961 ttggcttctc aattttaatg gttcatcggg tcattcttgt aattgttaat ctttcttgcc
     4021 tcaattcgga ccctctcacc aatatgacaa agctttcccg tccgaggttt gaagtcaacc
     4081 cgaaacatct cttgaggctt cacatctatg ggatgttgtg attctcagta ggtgaggtga
     4141 ttaccctctg caagttacaa aatgttaatg gctatgtgtt ccagggtggt tgggaaaatg
     4201 atgaatccgt tgaggaggaa gctgcacgtg aagcggtgga agaggctgga gttcgagggg
     4261 atttaatggc tctctttata tgcacagaag gagctccaga aatacaatgc tggaaatgca
     4321 tttccaggtc ttactaaagt tccatcatta gttataaagg tgtcaatttt gatcctttaa
     4381 cttatgagtg ggtcgatttg ggttg
//
LOCUS       XM_071830040            4743 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X13, mRNA.
ACCESSION   XM_071830040
VERSION     XM_071830040.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4743
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4743
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686141.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 ttgcaaggtc agattccaat ggaactcagt cacttcagat aacagatggg gttacgtctg
     3601 actccatggc taaagcttct aaaacaacat tagctagtgt gatgaacaag atgagaaagc
     3661 aaggtcctat ataactcaac agaaagggca ttttaaagtt tctctgagac tgctgaacct
     3721 atgaagggaa cttcatctac tgcactgcta aagagtctgg gcatgcggct ataagtatac
     3781 cctacttatg aatcttattg gtatttcgta tttgtaattg aaaggtaatg atggaacatc
     3841 ctattgcttc tcatctatct caaggtttac aaaatttcta cttcagccag caacagcatc
     3901 gatatagagt gcccggcaac caacatcact agactagaac aatcaaagac tcttaaatgc
     3961 ccaggaggag ctccagaaat acaaagctgg aaatgcccag aatgaatata aaagaggtat
     4021 tagctgctgg aactccgacc ttgaaaatct gaaagcccag gcttcgttgg tatgggctgg
     4081 tgtgattctc agttgtcgag gtgatcaccc tttaaatgca agttacaacc cccaacacgg
     4141 cgtctaagta cgatcaaaac tagcctaggt cttcatagta agtttatttt tgatatcttg
     4201 aggtggtctt cattagtcat gtttttttta agtttaagtt ataattttct gctttgtgca
     4261 taccttacgg attatgccga gcctatgtgg gtgtgctatt ggcttctcaa ttttaatggt
     4321 tcatcgggtc attcttgtaa ttgttaatct ttcttgcctc aattcggacc ctctcaccaa
     4381 tatgacaaag ctttcccgtc cgaggtttga agtcaacccg aaacatctct tgaggcttca
     4441 catctatggg atgttgtgat tctcagtagg tgaggtgatt accctctgca agttacaaaa
     4501 tgttaatggc tatgtgttcc agggtggttg ggaaaatgat gaatccgttg aggaggaagc
     4561 tgcacgtgaa gcggtggaag aggctggagt tcgaggggat ttaatggctc tctttatatg
     4621 cacagaagga gctccagaaa tacaatgctg gaaatgcatt tccaggtctt actaaagttc
     4681 catcattagt tataaaggtg tcaattttga tcctttaact tatgagtggg tcgatttggg
     4741 ttg
//
LOCUS       XM_071830041            4204 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X14, mRNA.
ACCESSION   XM_071830041
VERSION     XM_071830041.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4204
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4204
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686142.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa aggctgcaag
     2461 ttgcaaggtc agattccact cgatctcagt cacttcggat aacagatggg gttacgtccg
     2521 agtccatgcc taaagcttct ataactacat ttactagtga tgaaaaagat gagaaagcaa
     2581 ggtccaatat aattcaacgg aaagggagtt ttgaagtttc tctaagaatg ttgaacctga
     2641 caaggtaagt tttgatgaaa aaaataatta cttgatttca aaatgcaatt agatgatatc
     2701 cgtatatttg aattactttc tgcttgctcg acccgttttc ttttttttaa actgagagtg
     2761 tagcccaaat gactcgtgaa agacaaaatg gtaacccaaa gcaacgcatt tacaactgaa
     2821 gtgaaagggc ctcctctgct tggcatatat cttgagcaac ttattcaata tagtttggtt
     2881 tcttgtcttt attggatata cggacttatt catttataat tgttttttat tgaggcactg
     2941 atgaaaatgt agtttacttc accattgtca tgttctccta ataacttgta tcagctgcaa
     3001 gttgcaaggt cagattccaa tggaactcag tcacttcaga taacagatgg ggttacgtct
     3061 gactccatgg ctaaagcttc taaaacaaca ttagctagtg tgatgaacaa gatgagaaag
     3121 caaggtccta tataactcaa cagaaagggc attttaaagt ttctctgaga ctgctgaacc
     3181 tatgaaggga acttcatcta ctgcactgct aaagagtctg ggcatgcggc tataagtata
     3241 ccctacttat gaatcttatt ggtatttcgt atttgtaatt gaaaggtaat gatggaacat
     3301 cctattgctt ctcatctatc tcaaggttta caaaatttct acttcagcca gcaacagcat
     3361 cgatatagag tgcccggcaa ccaacatcac tagactagaa caatcaaaga ctcttaaatg
     3421 cccaggagga gctccagaaa tacaaagctg gaaatgccca gaatgaatat aaaagaggta
     3481 ttagctgctg gaactccgac cttgaaaatc tgaaagccca ggcttcgttg gtatgggctg
     3541 gtgtgattct cagttgtcga ggtgatcacc ctttaaatgc aagttacaac ccccaacacg
     3601 gcgtctaagt acgatcaaaa ctagcctagg tcttcatagt aagtttattt ttgatatctt
     3661 gaggtggtct tcattagtca tgtttttttt aagtttaagt tataattttc tgctttgtgc
     3721 ataccttacg gattatgccg agcctatgtg ggtgtgctat tggcttctca attttaatgg
     3781 ttcatcgggt cattcttgta attgttaatc tttcttgcct caattcggac cctctcacca
     3841 atatgacaaa gctttcccgt ccgaggtttg aagtcaaccc gaaacatctc ttgaggcttc
     3901 acatctatgg gatgttgtga ttctcagtag gtgaggtgat taccctctgc aagttacaaa
     3961 atgttaatgg ctatgtgttc cagggtggtt gggaaaatga tgaatccgtt gaggaggaag
     4021 ctgcacgtga agcggtggaa gaggctggag ttcgagggga tttaatggct ctctttatat
     4081 gcacagaagg agctccagaa atacaatgct ggaaatgcat ttccaggtct tactaaagtt
     4141 ccatcattag ttataaaggt gtcaattttg atcctttaac ttatgagtgg gtcgatttgg
     4201 gttg
//
LOCUS       XM_071830042            4391 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X15, mRNA.
ACCESSION   XM_071830042
VERSION     XM_071830042.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4391
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4391
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686143.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtcaga ttccactcga tctcagtcac ttcggataac agatggggtt
     2701 acgtccgagt ccatgcctaa agcttctata actacattta ctagtgatga aaaagatgag
     2761 aaagcaaggt ccaatataat tcaacggaaa gggagttttg aagtttctct aagaatgttg
     2821 aacctgacaa ggtaagtttt gatgaaaaaa ataattactt gatttcaaaa tgcaattaga
     2881 tgatatccgt atatttgaat tactttctgc ttgctcgacc cgttttcttt tttttaaact
     2941 gagagtgtag cccaaatgac tcgtgaaaga caaaatggta acccaaagca acgcatttac
     3001 aactgaagtg aaagggcctc ctctgcttgg catatatctt gagcaactta ttcaatatag
     3061 tttggtttct tgtctttatt ggatatacgg acttattcat ttataattgt tttttattga
     3121 ggcactgatg aaaatgtagt ttacttcacc attgtcatgt tctcctaata acttgtatca
     3181 gctgcaagtt gcaaggtcag attccaatgg aactcagtca cttcagataa cagatggggt
     3241 tacgtctgac tccatggcta aagcttctaa aacaacatta gctagtgtga tgaacaagat
     3301 gagaaagcaa ggtcctatat aactcaacag aaagggcatt ttaaagtttc tctgagactg
     3361 ctgaacctat gaagggaact tcatctactg cactgctaaa gagtctgggc atgcggctat
     3421 aagtataccc tacttatgaa tcttattggt atttcgtatt tgtaattgaa aggtaatgat
     3481 ggaacatcct attgcttctc atctatctca aggtttacaa aatttctact tcagccagca
     3541 acagcatcga tatagagtgc ccggcaacca acatcactag actagaacaa tcaaagactc
     3601 ttaaatgccc aggaggagct ccagaaatac aaagctggaa atgcccagaa tgaatataaa
     3661 agaggtatta gctgctggaa ctccgacctt gaaaatctga aagcccaggc ttcgttggta
     3721 tgggctggtg tgattctcag ttgtcgaggt gatcaccctt taaatgcaag ttacaacccc
     3781 caacacggcg tctaagtacg atcaaaacta gcctaggtct tcatagtaag tttatttttg
     3841 atatcttgag gtggtcttca ttagtcatgt tttttttaag tttaagttat aattttctgc
     3901 tttgtgcata ccttacggat tatgccgagc ctatgtgggt gtgctattgg cttctcaatt
     3961 ttaatggttc atcgggtcat tcttgtaatt gttaatcttt cttgcctcaa ttcggaccct
     4021 ctcaccaata tgacaaagct ttcccgtccg aggtttgaag tcaacccgaa acatctcttg
     4081 aggcttcaca tctatgggat gttgtgattc tcagtaggtg aggtgattac cctctgcaag
     4141 ttacaaaatg ttaatggcta tgtgttccag ggtggttggg aaaatgatga atccgttgag
     4201 gaggaagctg cacgtgaagc ggtggaagag gctggagttc gaggggattt aatggctctc
     4261 tttatatgca cagaaggagc tccagaaata caatgctgga aatgcatttc caggtcttac
     4321 taaagttcca tcattagtta taaaggtgtc aattttgatc ctttaactta tgagtgggtc
     4381 gatttgggtt g
//
LOCUS       XM_071830043            4715 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X16, mRNA.
ACCESSION   XM_071830043
VERSION     XM_071830043.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4715
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1277..1579
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686144.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1352..>1540
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcggtga tgaacaagat gagaaagcaa ggtccaatat
      901 aattcaacag aaaggggggc ttatagtttc tctgagaatg ttgaacctga caagggaact
      961 tcatctactg cactgttaaa gagtccgagc atgcgggtat aagtataccc taattatgaa
     1021 tcttattcgt attttgtaaa acgttctttc aatagacaaa tttgtgttga tttcactcga
     1081 tctcgtcact tcggataacc gatggggtta cgtctgagtc catgcctaaa gcttctaaaa
     1141 ctacatttac tagtgatgaa caagatgaga aagcaaggtc caatataatt caacggaaag
     1201 gggggcttat agtttctctg agaatgttga acctgacaag ggaacttcat ctactgcact
     1261 gttaaagagt ccgagcatgc ggatcccatt gacaggaatg gtggttgctg ccttgttttc
     1321 agaatttacg gtcaagatcc ttttgtcact agtgatagaa ctactaaact tctgtttttc
     1381 aactccaaag acgaacaaaa ctattcgata ctacaagcag gctgaatgtg aactggttaa
     1441 aattgatatt aattgccacg ttcaaggtga cattgtgctg gagtgtatta actttcaaga
     1501 tgatttgtct tgtgaaaaga tgatgtatcg tgccatgttc aaacacaaca tttataaggt
     1561 tgaatatcgt gatacttaat tgtgaactgg ctaaggatcc gtttcttggg gacttcaggg
     1621 ctgagcttct tttcttcgat ttggctggtt tggatgtgga gggtctccct atagaagcat
     1681 tttcaaaggt tcaacaactg tttaacagtg ttgattggct agatcctaaa agtgatgcat
     1741 cgcactaaat gttctcaacc aaatagtcgg tcaacagtgc gttgttgaag ctagcaatca
     1801 agataaagac agcctcatat tattatcatt agtaataaaa cgaaagcaca actcagatat
     1861 ggctaaggag aaaccttcat gttctgatat tgatcacaga agggcatata accgtgagat
     1921 catactttcg aaggtcaaaa tatcactgaa cgagttgatg ggatcatgtt gtttactttg
     1981 gaagactcaa caatggatgc tgatcaatta agtggacaac ctcataaagc tgtccgacaa
     2041 atgagaggag atgtagacaa ttaagggtta caaaggaaac tgggcaaatg tgaacaggaa
     2101 gcttgtgggc tgagacagta actaatagtg atgaacaaga tgagaaagca aggtccaata
     2161 tatttcatca gaaagggtgt ttcaaagtaa cgatggaaca tcctattgct cctcatcttt
     2221 ctcaagggga tgctacatcc atgcccaaac gacccattac ccacccatag ttctgcagac
     2281 aagcaatctt taaagggttg gaatatcttt ctttttatct ctattataag gagaaaatat
     2341 cacgagtggt ccttgtggtt tgtatcaaaa atcaccggtg atcgctgtac tctttttttg
     2401 tcaaggctgg tccctgtgat ttgcatttga atcaatgaag acttgaaaga taagatgcac
     2461 atcagcttga aaaacgtgag ggcattatat atactttgta tccgaaactg aatagaaacc
     2521 tctgaaatct ttttacacac taattacttt caaagaagta atgccctcct ctacttggca
     2581 tacatcttga gcaatttatt caatatagtt tggatatatg gaattttacg cattctccat
     2641 cgactttact tttgaattct ctgccccttc ctcctgctct tttacaactg ttatgatgtt
     2701 ctctttttga atcaaccaac agaaatttta aggtccagat agaaattcat tggatttatc
     2761 ctctgttaca cactgtaggt aatcacttat gagttagttg aatttttaca tgcgttgttg
     2821 cttactattt taaaatgcta agacatttat atagatagag gactagatcc atcggtacac
     2881 aaacgttatg gtttttttgg aggcactgat gaaaatgtag tttacttcac ccattgtcat
     2941 gttctcctaa aattttcatt tcagctgcaa gttgcaaggt cagattccac tcgatctcag
     3001 tcacttcgga taacagatgg ggttacgtcc gagtccatgc ctaaagcttc tataactaca
     3061 tttactagtg atgaaaaaga tgagaaagca aggtccaata taattcaacg gaaagggagt
     3121 tttgaagttt ctctaagaat gttgaacctg acaaggtaag ttttgatgaa aaaaataatt
     3181 acttgatttc aaaatgcaat tagatgatat ccgtatattt gaattacttt ctgcttgctc
     3241 gacccgtttt ctttttttta aactgagagt gtagcccaaa tgactcgtga aagacaaaat
     3301 ggtaacccaa agcaacgcat ttacaactga agtgaaaggg cctcctctgc ttggcatata
     3361 tcttgagcaa cttattcaat atagtttggt ttcttgtctt tattggatat acggacttat
     3421 tcatttataa ttgtttttta ttgaggcact gatgaaaatg tagtttactt caccattgtc
     3481 atgttctcct aataacttgt atcagctgca agttgcaagg tcagattcca atggaactca
     3541 gtcacttcag ataacagatg gggttacgtc tgactccatg gctaaagctt ctaaaacaac
     3601 attagctagt gtgatgaaca agatgagaaa gcaaggtcct atataactca acagaaaggg
     3661 cattttaaag tttctctgag actgctgaac ctatgaaggg aacttcatct actgcactgc
     3721 taaagagtct gggcatgcgg ctataagtat accctactta tgaatcttat tggtatttcg
     3781 tatttgtaat tgaaaggtaa tgatggaaca tcctattgct tctcatctat ctcaaggttt
     3841 acaaaatttc tacttcagcc agcaacagca tcgatataga gtgcccggca accaacatca
     3901 ctagactaga acaatcaaag actcttaaat gcccaggagg agctccagaa atacaaagct
     3961 ggaaatgccc agaatgaata taaaagaggt attagctgct ggaactccga ccttgaaaat
     4021 ctgaaagccc aggcttcgtt ggtatgggct ggtgtgattc tcagttgtcg aggtgatcac
     4081 cctttaaatg caagttacaa cccccaacac ggcgtctaag tacgatcaaa actagcctag
     4141 gtcttcatag taagtttatt tttgatatct tgaggtggtc ttcattagtc atgttttttt
     4201 taagtttaag ttataatttt ctgctttgtg cataccttac ggattatgcc gagcctatgt
     4261 gggtgtgcta ttggcttctc aattttaatg gttcatcggg tcattcttgt aattgttaat
     4321 ctttcttgcc tcaattcgga ccctctcacc aatatgacaa agctttcccg tccgaggttt
     4381 gaagtcaacc cgaaacatct cttgaggctt cacatctatg ggatgttgtg attctcagta
     4441 ggtgaggtga ttaccctctg caagttacaa aatgttaatg gctatgtgtt ccagggtggt
     4501 tgggaaaatg atgaatccgt tgaggaggaa gctgcacgtg aagcggtgga agaggctgga
     4561 gttcgagggg atttaatggc tctctttata tgcacagaag gagctccaga aatacaatgc
     4621 tggaaatgca tttccaggtc ttactaaagt tccatcatta gttataaagg tgtcaatttt
     4681 gatcctttaa cttatgagtg ggtcgatttg ggttg
//
LOCUS       XM_071830044            4859 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X17, mRNA.
ACCESSION   XM_071830044
VERSION     XM_071830044.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4859
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686145.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 gtttggtttc ttgtctttat tggatatacg gacttattca tttataattg ttttttattg
     3601 aggcactgat gaaaatgtag tttacttcac cattgtcatg ttctcctaat aacttgtatc
     3661 agctgcaagt tgcaaggtca gattccaatg gaactcagtc acttcagata acagatgggg
     3721 ttacgtctga ctccatggct aaagcttcta aaacaacatt agctagtgtg atgaacaaga
     3781 tgagaaagca aggtcctata taactcaaca gaaagggcat tttaaagttt ctctgagact
     3841 gctgaaccta tgaagggaac ttcatctact gcactgctaa agagtctggg catgcggcta
     3901 taagtatacc ctacttatga atcttattgg tatttcgtat ttgtaattga aaggtaatga
     3961 tggaacatcc tattgcttct catctatctc aaggtttaca aaatttctac ttcagccagc
     4021 aacagcatcg atatagagtg cccggcaacc aacatcacta gactagaaca atcaaagact
     4081 cttaaatgcc caggaggagc tccagaaata caaagctgga aatgcccaga atgaatataa
     4141 aagaggtatt agctgctgga actccgacct tgaaaatctg aaagcccagg cttcgttggt
     4201 atgggctggt gtgattctca gttgtcgagg tgatcaccct ttaaatgcaa gttacaaccc
     4261 ccaacacggc gtctaagtac gatcaaaact agcctaggtc ttcatagtaa gtttattttt
     4321 gatatcttga ggtggtcttc attagtcatg ttttttttaa gtttaagtta taattttctg
     4381 ctttgtgcat accttacgga ttatgccgag cctatgtggg tgtgctattg gcttctcaat
     4441 tttaatggtt catcgggtca ttcttgtaat tgttaatctt tcttgcctca attcggaccc
     4501 tctcaccaat atgacaaagc tttcccgtcc gaggtttgaa gtcaacccga aacatctctt
     4561 gaggcttcac atctatggga tgttgtgatt ctcagtaggt gaggtgatta ccctctgcaa
     4621 gttacaaaat gttaatggct atgtgttcca gggtggttgg gaaaatgatg aatccgttga
     4681 ggaggaagct gcacgtgaag cggtggaaga ggctggagtt cgaggggatt taatgaagga
     4741 gctccagaaa tacaatgctg gaaatgcatt tccaggtctt actaaagttc catcattagt
     4801 tataaaggtg tcaattttga tcctttaact tatgagtggg tcgatttggg ttgtttggg
//
LOCUS       XM_071830045            4606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X18, mRNA.
ACCESSION   XM_071830045
VERSION     XM_071830045.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4606
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686146.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 gtttggtttc ttgtctttat tggatatacg gacttattca tttataattg ttttttattg
     3601 aggcactgat gaaaatgtag tttacttcac cattgtcatg ttctcctaat aacttgtatc
     3661 agctgcaagt tgcaaggtca gattccaatg gaactcagtc acttcagata acagatgggg
     3721 ttacgtctga ctccatggct aaagcttcta aaacaacatt agctagtgtg atgaacaaga
     3781 tgagaaagca aggtcctata taactcaaca gaaagggcat tttaaagttt ctctgagact
     3841 gctgaaccta tgaagggaac ttcatctact gcactgctaa agagtctggg catgcggcta
     3901 taagtatacc ctacttatga atcttattgg tatttcgtat ttgtaattga aaggtaatga
     3961 tggaacatcc tattgcttct catctatctc aaggtttaca aaatttctac ttcagccagc
     4021 aacagcatcg atatagagtg cccggcaacc aacatcacta gactagaaca atcaaagact
     4081 cttaaatgcc caggaggagc tccagaaata caaagctgga aatgcccaga atgaatataa
     4141 aagaggtatt agctgctgga actccgacct tgaaaatctg aaagcccagg cttcgttggt
     4201 atgggctggt gtgattctca gttgtcgagg tgatcaccct ttaaatgcaa gttacaaccc
     4261 ccaacacggc gtctaagtac gatcaaaact agcctaggtc ttcatactat gggatgttgt
     4321 gattctcagt aggtgaggtg attaccctct gcaagttaca aaatgttaat ggctatgtgt
     4381 tccagggtgg ttgggaaaat gatgaatccg ttgaggagga agctgcacgt gaagcggtgg
     4441 aagaggctgg agttcgaggg gatttaatgg ctctctttat atgcacagaa ggagctccag
     4501 aaatacaatg ctggaaatgc atttccaggt cttactaaag ttccatcatt agttataaag
     4561 gtgtcaattt tgatccttta acttatgagt gggtcgattt gggttg
//
LOCUS       XM_071830046            4845 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X19, mRNA.
ACCESSION   XM_071830046
VERSION     XM_071830046.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4845
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4845
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686147.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 gtttggtttc ttgtctttat tggatatacg gacttattca tttataattg ttttttattg
     3601 aggcactgat gaaaatgtag tttacttcac cattgtcatg ttctcctaat aacttgtatc
     3661 agctgcaagt tgcaaggtca gattccaatg gaactcagtc acttcagata acagatgggg
     3721 ttacgtctga ctccatggct aaagcttcta aaacaacatt agctagtgtg atgaacaaga
     3781 tgagaaagca aggtcctata taactcaaca gaaagggcat tttaaagttt ctctgagact
     3841 gctgaaccta tgaagagtct gggcatgcgg ctataagtat accctactta tgaatcttat
     3901 tggtatttcg tatttgtaat tgaaaggtaa tgatggaaca tcctattgct tctcatctat
     3961 ctcaaggttt acaaaatttc tacttcagcc agcaacagca tcgatataga gtgcccggca
     4021 accaacatca ctagactaga acaatcaaag actcttaaat gcccaggagg agctccagaa
     4081 atacaaagct ggaaatgccc agaatgaata taaaagaggt attagctgct ggaactccga
     4141 ccttgaaaat ctgaaagccc aggcttcgtt ggtatgggct ggtgtgattc tcagttgtcg
     4201 aggtgatcac cctttaaatg caagttacaa cccccaacac ggcgtctaag tacgatcaaa
     4261 actagcctag gtcttcatag taagtttatt tttgatatct tgaggtggtc ttcattagtc
     4321 atgttttttt taagtttaag ttataatttt ctgctttgtg cataccttac ggattatgcc
     4381 gagcctatgt gggtgtgcta ttggcttctc aattttaatg gttcatcggg tcattcttgt
     4441 aattgttaat ctttcttgcc tcaattcgga ccctctcacc aatatgacaa agctttcccg
     4501 tccgaggttt gaagtcaacc cgaaacatct cttgaggctt cacatctatg ggatgttgtg
     4561 attctcagta ggtgaggtga ttaccctctg caagttacaa aatgttaatg gctatgtgtt
     4621 ccagggtggt tgggaaaatg atgaatccgt tgaggaggaa gctgcacgtg aagcggtgga
     4681 agaggctgga gttcgagggg atttaatggc tctctttata tgcacagaag gagctccaga
     4741 aatacaatgc tggaaatgca tttccaggtc ttactaaagt tccatcatta gttataaagg
     4801 tgtcaatttt gatcctttaa cttatgagtg ggtcgatttg ggttg
//
LOCUS       XM_071830047            4515 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X20, mRNA.
ACCESSION   XM_071830047
VERSION     XM_071830047.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4515
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4515
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686148.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca agttgcaagg tcagattcca atggaactca gtcacttcag ataacagatg
     3361 gggttacgtc tgactccatg gctaaagctt ctaaaacaac attagctagt gtgatgaaca
     3421 agatgagaaa gcaaggtcct atataactca acagaaaggg cattttaaag tttctctgag
     3481 actgctgaac ctatgaaggg aacttcatct actgcactgc taaagagtct gggcatgcgg
     3541 ctataagtat accctactta tgaatcttat tggtatttcg tatttgtaat tgaaaggtaa
     3601 tgatggaaca tcctattgct tctcatctat ctcaaggttt acaaaatttc tacttcagcc
     3661 agcaacagca tcgatataga gtgcccggca accaacatca ctagactaga acaatcaaag
     3721 actcttaaat gcccaggagg agctccagaa atacaaagct ggaaatgccc agaatgaata
     3781 taaaagaggt attagctgct ggaactccga ccttgaaaat ctgaaagccc aggcttcgtt
     3841 ggtatgggct ggtgtgattc tcagttgtcg aggtgatcac cctttaaatg caagttacaa
     3901 cccccaacac ggcgtctaag tacgatcaaa actagcctag gtcttcatag taagtttatt
     3961 tttgatatct tgaggtggtc ttcattagtc atgttttttt taagtttaag ttataatttt
     4021 ctgctttgtg cataccttac ggattatgcc gagcctatgt gggtgtgcta ttggcttctc
     4081 aattttaatg gttcatcggg tcattcttgt aattgttaat ctttcttgcc tcaattcgga
     4141 ccctctcacc aatatgacaa agctttcccg tccgaggttt gaagtcaacc cgaaacatct
     4201 cttgaggctt cacatctatg ggatgttgtg attctcagta ggtgaggtga ttaccctctg
     4261 caagttacaa aatgttaatg gctatgtgtt ccagggtggt tgggaaaatg atgaatccgt
     4321 tgaggaggaa gctgcacgtg aagcggtgga agaggctgga gttcgagggg atttaatggc
     4381 tctctttata tgcacagaag gagctccaga aatacaatgc tggaaatgca tttccaggtc
     4441 ttactaaagt tccatcatta gttataaagg tgtcaatttt gatcctttaa cttatgagtg
     4501 ggtcgatttg ggttg
//
LOCUS       XM_071830048            4931 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X21, mRNA.
ACCESSION   XM_071830048
VERSION     XM_071830048.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4931
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4931
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686149.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 gtttggtttc ttgtctttat tggatatacg gacttattca tttataattg ttttttattg
     3601 aggcactgat gaaaatgtag tttacttcac cattgtcatg ttctcctaat aacttgtatc
     3661 agctgcaagt tgcaaggtca gattccaatg gaactcagtc acttcagata acagatgggg
     3721 ttacgtctga ctccatggct aaagcttcta aaacaacatt agctagtgtg atgaacaaga
     3781 tgagaaagca aggtcctata taactcaaca gaaagggcat tttaaagttt ctctgagact
     3841 gctgaaccta tgaagggaac ttcatctact gcactgctaa agagtctggg catgcggcta
     3901 taagtatacc ctacttatga atcttattgg tatttcgtat ttgtaattga aaggtaatga
     3961 tggaacatcc tattgcttct catctatctc aaggtttaca aaatttctac ttcagccagc
     4021 aacagcatcg atatagagtg cccggcaacc aacatcacta gactagaaca atcaaagact
     4081 cttaaatgcc caggaggagc tccagaaata caaagctgga aatgcccaga atgaatataa
     4141 aagaggtatt agctgctgga actccgacct tgaaaatctg aaagcccagg cttcgttggt
     4201 atgggctggt gtgattctca gttgtcgagg tgatcaccct ttaaatgcaa gttacaaccc
     4261 ccaacacggc gtctaagtac gatcaaaact agcctaggtc ttcatagtaa gtttattttt
     4321 gatatcttga ggtggtcttc attagtcatg ttttttttaa gtttaagtta taattttctg
     4381 ctttgtgcat accttacgga ttatgccgag cctatgtggg tgtgctattg gcttctcaat
     4441 tttaatggtt catcgggtca ttcttgtaat tgttaatctt tcttgcctca attcggaccc
     4501 tctcaccaat atgacaaagc tttcccgtcc gaggtttgaa gtcaacccga aacatctctt
     4561 gaggcttcac atctatggga tgttgtgatt ctcagtaggt gaggtgatta ccctctgcaa
     4621 gttacaaaat gttaatggct atgtgttcca gggtggttgg gaaaatgatg aatccgttga
     4681 ggaggaagct gcacgtgaag cggtggaaga ggctggagtt cgaggggatt taatgcttca
     4741 tggaagctac atgtgagttt cctgacagct tcgtggaagc tacatgtgaa tttcctcaca
     4801 acttcgtgga agctacatgt gagtttccta acaactttgt agaagcttcg tatgagtttc
     4861 ctagaatctt ccctctaatt gtttaaagtt ctccatatct ccaacattct atgcttttgt
     4921 aaccaaatag a
//
LOCUS       XM_071830049            4911 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X22, mRNA.
ACCESSION   XM_071830049
VERSION     XM_071830049.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4911
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4911
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             1434..1736
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="formin-like protein 18 isoform X1"
                     /protein_id="XP_071686150.1"
                     /db_xref="GeneID:139839852"
                     /translation="MRIPLTGMVVAALFSEFTVKILLSLVIELLNFCFSTPKTNKTIR
                     YYKQAECELVKIDINCHVQGDIVLECINFQDDLSCEKMMYRAMFKHNIYKVEYRDT"
     misc_feature    <1509..>1697
                     /gene="LOC139839852"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     Region: PTEN_C2; pfam10409"
                     /db_xref="CDD:463081"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 tcccattgac aggaatggtg gttgctgcct tgttttcaga atttacggtc aagatccttt
     1501 tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg aacaaaacta
     1561 ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat tgccacgttc
     1621 aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt gaaaagatga
     1681 tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat acttaattgt
     1741 gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt cttcgatttg
     1801 gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca acaactgttt
     1861 aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt ctcaaccaaa
     1921 tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc ctcatattat
     1981 tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa ccttcatgtt
     2041 ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag gtcaaaatat
     2101 cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa tggatgctga
     2161 tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg tagacaatta
     2221 agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga gacagtaact
     2281 aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa agggtgtttc
     2341 aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc tacatccatg
     2401 cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa agggttggaa
     2461 tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct tgtggtttgt
     2521 atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc ctgtgatttg
     2581 catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa acgtgagggc
     2641 attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt tacacactaa
     2701 ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca atttattcaa
     2761 tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt gaattctctg
     2821 ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc aaccaacaga
     2881 aattttaagg tccagataga aattcattgg atttatcctc tgttacacac tgtaggtaat
     2941 cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa aatgctaaga
     3001 catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt tttttggagg
     3061 cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat tttcatttca
     3121 gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa cagatggggt
     3181 tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg aaaaagatga
     3241 gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc taagaatgtt
     3301 gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa atgcaattag
     3361 atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt ttttttaaac
     3421 tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc aacgcattta
     3481 caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt attcaatata
     3541 gtttggtttc ttgtctttat tggatatacg gacttattca tttataattg ttttttattg
     3601 aggcactgat gaaaatgtag tttacttcac cattgtcatg ttctcctaat aacttgtatc
     3661 agctgcaagt tgcaaggtca gattccaatg gaactcagtc acttcagata acagatgggg
     3721 ttacgtctga ctccatggct aaagcttcta aaacaacatt agctagtgtg atgaacaaga
     3781 tgagaaagca aggtcctata taactcaaca gaaagggcat tttaaagttt ctctgagact
     3841 gctgaaccta tgaagggaac ttcatctact gcactgctaa agagtctggg catgcggcta
     3901 taagtatacc ctacttatga atcttattgg tatttcgtat ttgtaattga aaggtaatga
     3961 tggaacatcc tattgcttct catctatctc aaggtttaca aaatttctac ttcagccagc
     4021 aacagcatcg atatagagtg cccggcaacc aacatcacta gactagaaca atcaaagact
     4081 cttaaatgcc caggaggagc tccagaaata caaagctgga aatgcccaga atgaatataa
     4141 aagaggtatt agctgctgga actccgacct tgaaaatctg aaagcccagg cttcgttggt
     4201 atgggctggt gtgattctca gttgtcgagg tgatcaccct ttaaatgcaa gttacaaccc
     4261 ccaacacggc gtctaagtac gatcaaaact agcctaggtc ttcatagtaa gtttattttt
     4321 gatatcttga ggtggtcttc attagtcatg ttttttttaa gtttaagtta taattttctg
     4381 ctttgtgcat accttacgga ttatgccgag cctatgtggg tgtgctattg gcttctcaat
     4441 tttaatggtt catcgggtca ttcttgtaat tgttaatctt tcttgcctca attcggaccc
     4501 tctcaccaat atgacaaagc tttcccgtcc gaggtttgaa gtcaacccga aacatctctt
     4561 gaggcttcac atctatggga tgttgtgatt ctcagtaggt gaggtgatta ccctctgcaa
     4621 gttacaaaat gttaatggct atgtgttcca ggctgtaaag tttttctatg tccaatgagt
     4681 gaacttccaa atatttaccc ttatggatca tgctgagcct ctgttggtgt gctaagtttc
     4741 tggtatgtat cctgagaaat tgtgcagtac gtcctcgacc tcaaataagc caatgtactc
     4801 gcctaactca cataagttta tttttgttaa ggttgtactt ttgttatgta attcacaccg
     4861 taagctaatc atttaccata gatgaatttc ataggtgttt gatagaggtg g
//
LOCUS       XM_071830050            4859 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X23, mRNA.
ACCESSION   XM_071830050
VERSION     XM_071830050.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4859
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             605..850
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686151.1"
                     /db_xref="GeneID:139839852"
                     /translation="MHYLCKGTSSTALLKSLSMRISSLRITDGVTSESMPKASKTTFT
                     SDEQDEKARSNIIQRKGGFIVSLRMLNLTRELHLLHC"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcggg
     1441 aatggtggtt gctgccttgt tttcagaatt tacggtcaag atccttttgt cactagtgat
     1501 agaactacta aacttctgtt tttcaactcc aaagacgaac aaaactattc gatactacaa
     1561 gcaggctgaa tgtgaactgg ttaaaattga tattaattgc cacgttcaag gtgacattgt
     1621 gctggagtgt attaactttc aagatgattt gtcttgtgaa aagatgatgt atcgtgccat
     1681 gttcaaacac aacatttata aggttgaata tcgtgatact taattgtgaa ctggctaagg
     1741 atccgtttct tggggacttc agggctgagc ttcttttctt cgatttggct ggtttggatg
     1801 tggagggtct ccctatagaa gcattttcaa aggttcaaca actgtttaac agtgttgatt
     1861 ggctagatcc taaaagtgat gcatcgcact aaatgttctc aaccaaatag tcggtcaaca
     1921 gtgcgttgtt gaagctagca atcaagataa agacagcctc atattattat cattagtaat
     1981 aaaacgaaag cacaactcag atatggctaa ggagaaacct tcatgttctg atattgatca
     2041 cagaagggca tataaccgtg agatcatact ttcgaaggtc aaaatatcac tgaacgagtt
     2101 gatgggatca tgttgtttac tttggaagac tcaacaatgg atgctgatca attaagtgga
     2161 caacctcata aagctgtccg acaaatgaga ggagatgtag acaattaagg gttacaaagg
     2221 aaactgggca aatgtgaaca ggaagcttgt gggctgagac agtaactaat agtgatgaac
     2281 aagatgagaa agcaaggtcc aatatatttc atcagaaagg gtgtttcaaa gtaacgatgg
     2341 aacatcctat tgctcctcat ctttctcaag gggatgctac atccatgccc aaacgaccca
     2401 ttacccaccc atagttctgc agacaagcaa tctttaaagg gttggaatat ctttcttttt
     2461 atctctatta taaggagaaa atatcacgag tggtccttgt ggtttgtatc aaaaatcacc
     2521 ggtgatcgct gtactctttt tttgtcaagg ctggtccctg tgatttgcat ttgaatcaat
     2581 gaagacttga aagataagat gcacatcagc ttgaaaaacg tgagggcatt atatatactt
     2641 tgtatccgaa actgaataga aacctctgaa atctttttac acactaatta ctttcaaaga
     2701 agtaatgccc tcctctactt ggcatacatc ttgagcaatt tattcaatat agtttggata
     2761 tatggaattt tacgcattct ccatcgactt tacttttgaa ttctctgccc cttcctcctg
     2821 ctcttttaca actgttatga tgttctcttt ttgaatcaac caacagaaat tttaaggtcc
     2881 agatagaaat tcattggatt tatcctctgt tacacactgt aggtaatcac ttatgagtta
     2941 gttgaatttt tacatgcgtt gttgcttact attttaaaat gctaagacat ttatatagat
     3001 agaggactag atccatcggt acacaaacgt tatggttttt ttggaggcac tgatgaaaat
     3061 gtagtttact tcacccattg tcatgttctc ctaaaatttt catttcagct gcaagttgca
     3121 aggtcagatt ccactcgatc tcagtcactt cggataacag atggggttac gtccgagtcc
     3181 atgcctaaag cttctataac tacatttact agtgatgaaa aagatgagaa agcaaggtcc
     3241 aatataattc aacggaaagg gagttttgaa gtttctctaa gaatgttgaa cctgacaagg
     3301 taagttttga tgaaaaaaat aattacttga tttcaaaatg caattagatg atatccgtat
     3361 atttgaatta ctttctgctt gctcgacccg ttttcttttt tttaaactga gagtgtagcc
     3421 caaatgactc gtgaaagaca aaatggtaac ccaaagcaac gcatttacaa ctgaagtgaa
     3481 agggcctcct ctgcttggca tatatcttga gcaacttatt caatatagtt tggtttcttg
     3541 tctttattgg atatacggac ttattcattt ataattgttt tttattgagg cactgatgaa
     3601 aatgtagttt acttcaccat tgtcatgttc tcctaataac ttgtatcagc tgcaagttgc
     3661 aaggtcagat tccaatggaa ctcagtcact tcagataaca gatggggtta cgtctgactc
     3721 catggctaaa gcttctaaaa caacattagc tagtgtgatg aacaagatga gaaagcaagg
     3781 tcctatataa ctcaacagaa agggcatttt aaagtttctc tgagactgct gaacctatga
     3841 agggaacttc atctactgca ctgctaaaga gtctgggcat gcggctataa gtatacccta
     3901 cttatgaatc ttattggtat ttcgtatttg taattgaaag gtaatgatgg aacatcctat
     3961 tgcttctcat ctatctcaag gtttacaaaa tttctacttc agccagcaac agcatcgata
     4021 tagagtgccc ggcaaccaac atcactagac tagaacaatc aaagactctt aaatgcccag
     4081 gaggagctcc agaaatacaa agctggaaat gcccagaatg aatataaaag aggtattagc
     4141 tgctggaact ccgaccttga aaatctgaaa gcccaggctt cgttggtatg ggctggtgtg
     4201 attctcagtt gtcgaggtga tcacccttta aatgcaagtt acaaccccca acacggcgtc
     4261 taagtacgat caaaactagc ctaggtcttc atagtaagtt tatttttgat atcttgaggt
     4321 ggtcttcatt agtcatgttt tttttaagtt taagttataa ttttctgctt tgtgcatacc
     4381 ttacggatta tgccgagcct atgtgggtgt gctattggct tctcaatttt aatggttcat
     4441 cgggtcattc ttgtaattgt taatctttct tgcctcaatt cggaccctct caccaatatg
     4501 acaaagcttt cccgtccgag gtttgaagtc aacccgaaac atctcttgag gcttcacatc
     4561 tatgggatgt tgtgattctc agtaggtgag gtgattaccc tctgcaagtt acaaaatgtt
     4621 aatggctatg tgttccaggg tggttgggaa aatgatgaat ccgttgagga ggaagctgca
     4681 cgtgaagcgg tggaagaggc tggagttcga ggggatttaa tggctctctt tatatgcaca
     4741 gaaggagctc cagaaataca atgctggaaa tgcatttcca ggtcttacta aagttccatc
     4801 attagttata aaggtgtcaa ttttgatcct ttaacttatg agtgggtcga tttgggttg
//
LOCUS       XM_071830051            4832 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X24, mRNA.
ACCESSION   XM_071830051
VERSION     XM_071830051.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4832
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4832
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             605..850
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686152.1"
                     /db_xref="GeneID:139839852"
                     /translation="MHYLCKGTSSTALLKSLSMRISSLRITDGVTSESMPKASKTTFT
                     SDEQDEKARSNIIQRKGGFIVSLRMLNLTRELHLLHC"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcgggta taagtatacc ctaattatga atcttattcg
      901 tattttgtaa aacgttcttt caatagacaa atttgtgttg atttcactcg atctcgtcac
      961 ttcggataac cgatggggtt acgtctgagt ccatgcctaa agcttctaaa actacattta
     1021 ctagtgatga acaagatgag aaagcaaggt ccaatataat tcaacagaaa ggggggctta
     1081 tagtttctct gagaatgttg aacctgacaa gggaacttca tctactgcac tgttaaagag
     1141 tccgagcatg cgggtataag tataccctaa ttatgaatct tattcgtatt ttgtaaaacg
     1201 ttctttcaat agacaaattt gtgttgattt cactcgatct cgtcacttcg gataaccgat
     1261 ggggttacgt ctgagtccat gcctaaagct tctaaaacta catttactag tgatgaacaa
     1321 gatgagaaag caaggtccaa tataattcaa cggaaagggg ggcttatagt ttctctgaga
     1381 atgttgaacc tgacaaggga acttcatcta ctgcactgtt aaagagtccg agcatgcgga
     1441 atttacggtc aagatccttt tgtcactagt gatagaacta ctaaacttct gtttttcaac
     1501 tccaaagacg aacaaaacta ttcgatacta caagcaggct gaatgtgaac tggttaaaat
     1561 tgatattaat tgccacgttc aaggtgacat tgtgctggag tgtattaact ttcaagatga
     1621 tttgtcttgt gaaaagatga tgtatcgtgc catgttcaaa cacaacattt ataaggttga
     1681 atatcgtgat acttaattgt gaactggcta aggatccgtt tcttggggac ttcagggctg
     1741 agcttctttt cttcgatttg gctggtttgg atgtggaggg tctccctata gaagcatttt
     1801 caaaggttca acaactgttt aacagtgttg attggctaga tcctaaaagt gatgcatcgc
     1861 actaaatgtt ctcaaccaaa tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga
     1921 taaagacagc ctcatattat tatcattagt aataaaacga aagcacaact cagatatggc
     1981 taaggagaaa ccttcatgtt ctgatattga tcacagaagg gcatataacc gtgagatcat
     2041 actttcgaag gtcaaaatat cactgaacga gttgatggga tcatgttgtt tactttggaa
     2101 gactcaacaa tggatgctga tcaattaagt ggacaacctc ataaagctgt ccgacaaatg
     2161 agaggagatg tagacaatta agggttacaa aggaaactgg gcaaatgtga acaggaagct
     2221 tgtgggctga gacagtaact aatagtgatg aacaagatga gaaagcaagg tccaatatat
     2281 ttcatcagaa agggtgtttc aaagtaacga tggaacatcc tattgctcct catctttctc
     2341 aaggggatgc tacatccatg cccaaacgac ccattaccca cccatagttc tgcagacaag
     2401 caatctttaa agggttggaa tatctttctt tttatctcta ttataaggag aaaatatcac
     2461 gagtggtcct tgtggtttgt atcaaaaatc accggtgatc gctgtactct ttttttgtca
     2521 aggctggtcc ctgtgatttg catttgaatc aatgaagact tgaaagataa gatgcacatc
     2581 agcttgaaaa acgtgagggc attatatata ctttgtatcc gaaactgaat agaaacctct
     2641 gaaatctttt tacacactaa ttactttcaa agaagtaatg ccctcctcta cttggcatac
     2701 atcttgagca atttattcaa tatagtttgg atatatggaa ttttacgcat tctccatcga
     2761 ctttactttt gaattctctg ccccttcctc ctgctctttt acaactgtta tgatgttctc
     2821 tttttgaatc aaccaacaga aattttaagg tccagataga aattcattgg atttatcctc
     2881 tgttacacac tgtaggtaat cacttatgag ttagttgaat ttttacatgc gttgttgctt
     2941 actattttaa aatgctaaga catttatata gatagaggac tagatccatc ggtacacaaa
     3001 cgttatggtt tttttggagg cactgatgaa aatgtagttt acttcaccca ttgtcatgtt
     3061 ctcctaaaat tttcatttca gctgcaagtt gcaaggtcag attccactcg atctcagtca
     3121 cttcggataa cagatggggt tacgtccgag tccatgccta aagcttctat aactacattt
     3181 actagtgatg aaaaagatga gaaagcaagg tccaatataa ttcaacggaa agggagtttt
     3241 gaagtttctc taagaatgtt gaacctgaca aggtaagttt tgatgaaaaa aataattact
     3301 tgatttcaaa atgcaattag atgatatccg tatatttgaa ttactttctg cttgctcgac
     3361 ccgttttctt ttttttaaac tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt
     3421 aacccaaagc aacgcattta caactgaagt gaaagggcct cctctgcttg gcatatatct
     3481 tgagcaactt attcaatata gtttggtttc ttgtctttat tggatatacg gacttattca
     3541 tttataattg ttttttattg aggcactgat gaaaatgtag tttacttcac cattgtcatg
     3601 ttctcctaat aacttgtatc agctgcaagt tgcaaggtca gattccaatg gaactcagtc
     3661 acttcagata acagatgggg ttacgtctga ctccatggct aaagcttcta aaacaacatt
     3721 agctagtgtg atgaacaaga tgagaaagca aggtcctata taactcaaca gaaagggcat
     3781 tttaaagttt ctctgagact gctgaaccta tgaagggaac ttcatctact gcactgctaa
     3841 agagtctggg catgcggcta taagtatacc ctacttatga atcttattgg tatttcgtat
     3901 ttgtaattga aaggtaatga tggaacatcc tattgcttct catctatctc aaggtttaca
     3961 aaatttctac ttcagccagc aacagcatcg atatagagtg cccggcaacc aacatcacta
     4021 gactagaaca atcaaagact cttaaatgcc caggaggagc tccagaaata caaagctgga
     4081 aatgcccaga atgaatataa aagaggtatt agctgctgga actccgacct tgaaaatctg
     4141 aaagcccagg cttcgttggt atgggctggt gtgattctca gttgtcgagg tgatcaccct
     4201 ttaaatgcaa gttacaaccc ccaacacggc gtctaagtac gatcaaaact agcctaggtc
     4261 ttcatagtaa gtttattttt gatatcttga ggtggtcttc attagtcatg ttttttttaa
     4321 gtttaagtta taattttctg ctttgtgcat accttacgga ttatgccgag cctatgtggg
     4381 tgtgctattg gcttctcaat tttaatggtt catcgggtca ttcttgtaat tgttaatctt
     4441 tcttgcctca attcggaccc tctcaccaat atgacaaagc tttcccgtcc gaggtttgaa
     4501 gtcaacccga aacatctctt gaggcttcac atctatggga tgttgtgatt ctcagtaggt
     4561 gaggtgatta ccctctgcaa gttacaaaat gttaatggct atgtgttcca gggtggttgg
     4621 gaaaatgatg aatccgttga ggaggaagct gcacgtgaag cggtggaaga ggctggagtt
     4681 cgaggggatt taatggctct ctttatatgc acagaaggag ctccagaaat acaatgctgg
     4741 aaatgcattt ccaggtctta ctaaagttcc atcattagtt ataaaggtgt caattttgat
     4801 cctttaactt atgagtgggt cgatttgggt tg
//
LOCUS       XM_071830052            4702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 18
            (LOC139839852), transcript variant X25, mRNA.
ACCESSION   XM_071830052
VERSION     XM_071830052.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4702
                     /gene="LOC139839852"
                     /note="formin-like protein 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839852"
     CDS             605..850
                     /gene="LOC139839852"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686153.1"
                     /db_xref="GeneID:139839852"
                     /translation="MHYLCKGTSSTALLKSLSMRISSLRITDGVTSESMPKASKTTFT
                     SDEQDEKARSNIIQRKGGFIVSLRMLNLTRELHLLHC"
ORIGIN      
        1 tgaagatgaa ggctctaaac gtctgacagt aatgctactg gtgaaaagaa ctcgtgcatg
       61 aagcatctat ctgttgggtg ggatctgctt cggcagtcaa ctcttctgcc tcatcctttg
      121 gttgggcatg ccttaacaac accatttccc acaatacaat acagttgtgt atttcttcaa
      181 catacagttg ctcttatagt gaatctgtgg aaggcgcccg agattgatat atcagaactc
      241 tagagtctct ctcttctcag catgatcaaa ctaaaaggca gaagaacaag gggatacaaa
      301 atcaaaatca cggacagctg tatctaataa acctgaaata gtgcaactgg gatcatgttc
      361 ttactttgtt ggaagactca tcaatggatc cacatcaagt gtcatatagt tttgtccgac
      421 aaatgagagg aggagatgga gacaattatt aaggtctaaa taaatgccag aagaaagctt
      481 gatactgtgt ctgatggtta caaaggagag aaggcaaatg tgaccaggat cagttgttgg
      541 gttcaggttg gatagcctct tgaaacttgt cgacacgcgt gcaaagaaca atagaattac
      601 tctcatgcat tatctttgta agggaacttc atctactgca ctgttaaaga gtctgagcat
      661 gcggatctcg tcacttcgga taaccgatgg ggttacgtct gagtccatgc ctaaagcttc
      721 taaaactaca tttactagtg atgaacaaga tgagaaagca aggtccaata taattcaacg
      781 gaaagggggg tttatagttt ctctgagaat gttgaacctg acaagggaac ttcatctact
      841 gcactgttaa agagtccgag catgcggtga tgaacaagat gagaaagcaa ggtccaatat
      901 aattcaacag aaaggggggc ttatagtttc tctgagaatg ttgaacctga caagggaact
      961 tcatctactg cactgttaaa gagtccgagc atgcgggtat aagtataccc taattatgaa
     1021 tcttattcgt attttgtaaa acgttctttc aatagacaaa tttgtgttga tttcactcga
     1081 tctcgtcact tcggataacc gatggggtta cgtctgagtc catgcctaaa gcttctaaaa
     1141 ctacatttac tagtgatgaa caagatgaga aagcaaggtc caatataatt caacggaaag
     1201 gggggcttat agtttctctg agaatgttga acctgacaag ggaacttcat ctactgcact
     1261 gttaaagagt ccgagcatgc gggaatggtg gttgctgcct tgttttcaga atttacggtc
     1321 aagatccttt tgtcactagt gatagaacta ctaaacttct gtttttcaac tccaaagacg
     1381 aacaaaacta ttcgatacta caagcaggct gaatgtgaac tggttaaaat tgatattaat
     1441 tgccacgttc aaggtgacat tgtgctggag tgtattaact ttcaagatga tttgtcttgt
     1501 gaaaagatga tgtatcgtgc catgttcaaa cacaacattt ataaggttga atatcgtgat
     1561 acttaattgt gaactggcta aggatccgtt tcttggggac ttcagggctg agcttctttt
     1621 cttcgatttg gctggtttgg atgtggaggg tctccctata gaagcatttt caaaggttca
     1681 acaactgttt aacagtgttg attggctaga tcctaaaagt gatgcatcgc actaaatgtt
     1741 ctcaaccaaa tagtcggtca acagtgcgtt gttgaagcta gcaatcaaga taaagacagc
     1801 ctcatattat tatcattagt aataaaacga aagcacaact cagatatggc taaggagaaa
     1861 ccttcatgtt ctgatattga tcacagaagg gcatataacc gtgagatcat actttcgaag
     1921 gtcaaaatat cactgaacga gttgatggga tcatgttgtt tactttggaa gactcaacaa
     1981 tggatgctga tcaattaagt ggacaacctc ataaagctgt ccgacaaatg agaggagatg
     2041 tagacaatta agggttacaa aggaaactgg gcaaatgtga acaggaagct tgtgggctga
     2101 gacagtaact aatagtgatg aacaagatga gaaagcaagg tccaatatat ttcatcagaa
     2161 agggtgtttc aaagtaacga tggaacatcc tattgctcct catctttctc aaggggatgc
     2221 tacatccatg cccaaacgac ccattaccca cccatagttc tgcagacaag caatctttaa
     2281 agggttggaa tatctttctt tttatctcta ttataaggag aaaatatcac gagtggtcct
     2341 tgtggtttgt atcaaaaatc accggtgatc gctgtactct ttttttgtca aggctggtcc
     2401 ctgtgatttg catttgaatc aatgaagact tgaaagataa gatgcacatc agcttgaaaa
     2461 acgtgagggc attatatata ctttgtatcc gaaactgaat agaaacctct gaaatctttt
     2521 tacacactaa ttactttcaa agaagtaatg ccctcctcta cttggcatac atcttgagca
     2581 atttattcaa tatagtttgg atatatggaa ttttacgcat tctccatcga ctttactttt
     2641 gaattctctg ccccttcctc ctgctctttt acaactgtta tgatgttctc tttttgaatc
     2701 aaccaacaga aattttaagg tccagataga aattcattgg atttatcctc tgttacacac
     2761 tgtaggtaat cacttatgag ttagttgaat ttttacatgc gttgttgctt actattttaa
     2821 aatgctaaga catttatata gatagaggac tagatccatc ggtacacaaa cgttatggtt
     2881 tttttggagg cactgatgaa aatgtagttt acttcaccca ttgtcatgtt ctcctaaaat
     2941 tttcatttca gctgcaagtt gcaaggtcag attccactcg atctcagtca cttcggataa
     3001 cagatggggt tacgtccgag tccatgccta aagcttctat aactacattt actagtgatg
     3061 aaaaagatga gaaagcaagg tccaatataa ttcaacggaa agggagtttt gaagtttctc
     3121 taagaatgtt gaacctgaca aggtaagttt tgatgaaaaa aataattact tgatttcaaa
     3181 atgcaattag atgatatccg tatatttgaa ttactttctg cttgctcgac ccgttttctt
     3241 ttttttaaac tgagagtgta gcccaaatga ctcgtgaaag acaaaatggt aacccaaagc
     3301 aacgcattta caactgaagt gaaagggcct cctctgcttg gcatatatct tgagcaactt
     3361 attcaatata gtttggtttc ttgtctttat tggatatacg gacttattca tttataattg
     3421 ttttttattg aggcactgat gaaaatgtag tttacttcac cattgtcatg ttctcctaat
     3481 aacttgtatc agctgcaagt tgcaaggtca gattccaatg gaactcagtc acttcagata
     3541 acagatgggg ttacgtctga ctccatggct aaagcttcta aaacaacatt agctagtgtg
     3601 atgaacaaga tgagaaagca aggtcctata taactcaaca gaaagggcat tttaaagttt
     3661 ctctgagact gctgaaccta tgaagggaac ttcatctact gcactgctaa agagtctggg
     3721 catgcggcta taagtatacc ctacttatga atcttattgg tatttcgtat ttgtaattga
     3781 aaggtaatga tggaacatcc tattgcttct catctatctc aaggtttaca aaatttctac
     3841 ttcagccagc aacagcatcg atatagagtg cccggcaacc aacatcacta gactagaaca
     3901 atcaaagact cttaaatgcc caggaggagc tccagaaata caaagctgga aatgcccaga
     3961 atgaatataa aagaggtatt agctgctgga actccgacct tgaaaatctg aaagcccagg
     4021 cttcgttggt atgggctggt gtgattctca gttgtcgagg tgatcaccct ttaaatgcaa
     4081 gttacaaccc ccaacacggc gtctaagtac gatcaaaact agcctaggtc ttcatagtaa
     4141 gtttattttt gatatcttga ggtggtcttc attagtcatg ttttttttaa gtttaagtta
     4201 taattttctg ctttgtgcat accttacgga ttatgccgag cctatgtggg tgtgctattg
     4261 gcttctcaat tttaatggtt catcgggtca ttcttgtaat tgttaatctt tcttgcctca
     4321 attcggaccc tctcaccaat atgacaaagc tttcccgtcc gaggtttgaa gtcaacccga
     4381 aacatctctt gaggcttcac atctatggga tgttgtgatt ctcagtaggt gaggtgatta
     4441 ccctctgcaa gttacaaaat gttaatggct atgtgttcca gggtggttgg gaaaatgatg
     4501 aatccgttga ggaggaagct gcacgtgaag cggtggaaga ggctggagtt cgaggggatt
     4561 taatggctct ctttatatgc acagaaggag ctccagaaat acaatgctgg aaatgcattt
     4621 ccaggtctta ctaaagttcc atcattagtt ataaaggtgt caattttgat cctttaactt
     4681 atgagtgggt cgatttgggt tg
//
LOCUS       XR_011757114            1611 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839854), transcript variant X1, ncRNA.
ACCESSION   XR_011757114
VERSION     XR_011757114.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1611
                     /gene="LOC139839854"
                     /note="uncharacterized LOC139839854; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839854"
     ncRNA           1..1611
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839854"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839854"
ORIGIN      
        1 agaaacacgg aagaatgcaa taaaattagg ggttcaatca cacttggctc ctcgctccat
       61 ccgttcgatc atacactctc tacgaatcat gttttcgatt cgttcattaa ccttcatcat
      121 tcaagatatg ctgcaaaaat ccaattacca attgttcggt tcataccatc tatcatctat
      181 gaaggtcgga acaatactga ttcaatagga agctcgtgat gttgacatat atgcatcgac
      241 gctgtaggct caaattggat aaaatcaaaa atagggtttc gactatattt atacaaaagg
      301 atcgtaaaaa ttatttctca tgttctggta ttccataaat atttccatga tttgttcttc
      361 aagtttgtta ctagatttta tgatcaacac aaatcatagt cacaatcacc cttttcacgg
      421 ttctggttta ttaattgtgt atgtttagta tttatgtttg tttgtatgaa taacgacctt
      481 aataaatgat catgctttca tttcagttgt atcttcttct tttctttttt tttttttttt
      541 agcaattacg agtatttttg gtcgatcagg tatgaactgt gtgacataaa cgttatccac
      601 attaatcgat aaacctattt atacatataa ctgttacgaa ctggaaaccg ggatcatcta
      661 cttaattttg taaaatatct ttcatttttg tagcttgagt gatggggtga aggtgtgaga
      721 gagagactat gaaatcttga ggaaagaact tctaggagat aatgaggtgg cggaatcact
      781 attggaatct gatgaagcgt taacacgtaa ccgcagggaa ccgttcggtg gtgttgatcg
      841 tgttatagct acccaatatt catgtgccaa aaggagttgt taatgaggtc gtagagcaaa
      901 ttgcatatgc tgatcatatt atagtcaata aggtatatgt ttatcgcgat acaacatagt
      961 tactccatgt tatattatgg aaacgcaaga ctttggaatt ggtgatcgtc gaaagtcaaa
     1021 cttgcaagac cttgaaagtc ttactggtgg agaggtaatt accgatgagc ttggcatgaa
     1081 accttgagaa aatggcacca gaaatgctag ggacgtggaa aaaggatcat ggacatcaga
     1141 tcgaacttga cacggctaca accaccattg ctgtgtgtgc ttgctaatcg ctggtcttgg
     1201 gtgcatttgg gatgggatat cagggttgct atgtattgta tggcaagatt accatcaatg
     1261 ctgcaaattt ttggtcccac ctcatgccag tattggttgt ttgaaaagtt gtgtgtcagc
     1321 ttgccacttg ttgcgcatcc tggataatgg ctagactttg ctgttagctt aaccccagta
     1381 gccaaatgag gctcactcac acacttgtaa aaaaatgtaa caagatgtca aaatggttgg
     1441 aggtgctctt gaaggtaaaa gaatggcccc agatctgggt atgtttgcat catttacaga
     1501 attagcaaag agagagtacc tttattttgg tggttctgta ttcaaccttt atttacagaa
     1561 ttcaaaaggt gcttacttta tgccaattaa gattgtctcg catctgtttt c
//
LOCUS       XR_011757115            1245 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839854), transcript variant X2, ncRNA.
ACCESSION   XR_011757115
VERSION     XR_011757115.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1245
                     /gene="LOC139839854"
                     /note="uncharacterized LOC139839854; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839854"
     ncRNA           1..1245
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839854"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839854"
ORIGIN      
        1 agaaacacgg aagaatgcaa taaaattagg ggttcaatca cacttggctc ctcgctccat
       61 ccgttcgatc atacactctc tacgaatcat gttttcgatt cgttcattaa ccttcatcat
      121 tcaagatatg ctgcaaaaat ccaattacca attgttcggt tcataccatc tatcatctat
      181 gaaggtcgga acaatactga ttcaatagga agctcgtgat gttgacatat atgcatcgac
      241 gctgtaggct caaattggat aaaatcaaaa atagggtttc gactatattt atacaaaagg
      301 atcgtaaaaa ttatttctca tgttctgctt gagtgatggg gtgaaggtgt gagagagaga
      361 ctatgaaatc ttgaggaaag aacttctagg agataatgag gtggcggaat cactattgga
      421 atctgatgaa gcgttaacac gtaaccgcag ggaaccgttc ggtggtgttg atcgtgttat
      481 agctacccaa tattcatgtg ccaaaaggag ttgttaatga ggtcgtagag caaattgcat
      541 atgctgatca tattatagtc aataaggtat atgtttatcg cgatacaaca tagttactcc
      601 atgttatatt atggaaacgc aagactttgg aattggtgat cgtcgaaagt caaacttgca
      661 agaccttgaa agtcttactg gtggagaggt aattaccgat gagcttggca tgaaaccttg
      721 agaaaatggc accagaaatg ctagggacgt ggaaaaagga tcatggacat cagatcgaac
      781 ttgacacggc tacaaccacc attgctgtgt gtgcttgcta atcgctggtc ttgggtgcat
      841 ttgggatggg atatcagggt tgctatgtat tgtatggcaa gattaccatc aatgctgcaa
      901 atttttggtc ccacctcatg ccagtattgg ttgtttgaaa agttgtgtgt cagcttgcca
      961 cttgttgcgc atcctggata atggctagac tttgctgtta gcttaacccc agtagccaaa
     1021 tgaggctcac tcacacactt gtaaaaaaat gtaacaagat gtcaaaatgg ttggaggtgc
     1081 tcttgaaggt aaaagaatgg ccccagatct gggtatgttt gcatcattta cagaattagc
     1141 aaagagagag tacctttatt ttggtggttc tgtattcaac ctttatttac agaattcaaa
     1201 aggtgcttac tttatgccaa ttaagattgt ctcgcatctg ttttc
//
LOCUS       XR_011757116            1615 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839854), transcript variant X3, ncRNA.
ACCESSION   XR_011757116
VERSION     XR_011757116.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1615
                     /gene="LOC139839854"
                     /note="uncharacterized LOC139839854; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839854"
     ncRNA           1..1615
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839854"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839854"
ORIGIN      
        1 agaaacacgg aagaatgcaa taaaattagg ggttcaatca cacttggctc ctcgctccat
       61 ccgttcgatc atacactctc tacgaatcat gttttcgatt cgttcattaa ccttcatcat
      121 tcaagatatg ctgcaaaaat ccaattacca attgttcggt tcataccatc tatcatctat
      181 gaaggtcgga acaatactga ttcaatagga agctcgtgat gttgacatat atgcatcgac
      241 gctgtaggct caaattggat aaaatcaaaa atagggtttc gactatattt atacaaaagg
      301 atcgtaaaaa ttatttctca tgttctggta ttccataaat atttccatga tttgttcttc
      361 aagtttgtta ctagatttta tgatcaacac aaatcatagt cacaatcacc cttttcacgg
      421 ttctggttta ttaattgtgt atgtttagta tttatgtttg tttgtatgaa taacgacctt
      481 aataaatgat catgctttca tttcagttgt atcttcttct tttctttttt tttttttttt
      541 agcaattacg agtatttttg gtcgatcagg tatgaactgt gtgacataaa cgttatccac
      601 attaatcgat aaacctattt atacatataa ctgttacgaa ctggaaaccg ggatcatcta
      661 cttaattttg taaaatatct ttcatttttg tagcttgagt gatggggtga aggtgtgaga
      721 gagagactat gaaatcttga ggaaagaact tctaggagat aatgaggtgg cggaatcact
      781 attggaatct gatgaagcgt taacacgtaa ccgcagggaa ccgttcggtg gtgttgatcg
      841 tgttatagct acccaatatt catgtgccaa aaggagttgt taatgaggtc gtagagcaaa
      901 ttgcatatgc tgatcatatt atagtcaata aggtatatgt ttatcgcgat acaacatagt
      961 tactccatgt tatattatgg aaacgcaaga ctttggaatt ggtgatcgtc gaaagtcaaa
     1021 cttgcaagac cttgaaagtc ttactggtgg agaggtaatt accgatgagc ttggcatgaa
     1081 accttgagaa aatggcacca gaaatgctag ggacgtggaa aaaggatcat ggacatcaga
     1141 tcgaacttga cacggctaca accaccattg ctgtgtgtgc ttgctaatcg ctggtcttgg
     1201 gtgcatttgg gatgggatat caggcagggt tgctatgtat tgtatggcaa gattaccatc
     1261 aatgctgcaa atttttggtc ccacctcatg ccagtattgg ttgtttgaaa agttgtgtgt
     1321 cagcttgcca cttgttgcgc atcctggata atggctagac tttgctgtta gcttaacccc
     1381 agtagccaaa tgaggctcac tcacacactt gtaaaaaaat gtaacaagat gtcaaaatgg
     1441 ttggaggtgc tcttgaaggt aaaagaatgg ccccagatct gggtatgttt gcatcattta
     1501 cagaattagc aaagagagag tacctttatt ttggtggttc tgtattcaac ctttatttac
     1561 agaattcaaa aggtgcttac tttatgccaa ttaagattgt ctcgcatctg ttttc
//
LOCUS       XR_011757117            1607 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839854), transcript variant X4, ncRNA.
ACCESSION   XR_011757117
VERSION     XR_011757117.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1607
                     /gene="LOC139839854"
                     /note="uncharacterized LOC139839854; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839854"
     ncRNA           1..1607
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839854"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839854"
ORIGIN      
        1 agaaacacgg aagaatgcaa taaaattagg ggttcaatca cacttggctc ctcgctccat
       61 ccgttcgatc atacactctc tacgaatcat gttttcgatt cgttcattaa ccttcatcat
      121 tcaagatatg ctgcaaaaat ccaattacca attgttcggt tcataccatc tatcatctat
      181 gtcggaacaa tactgattca ataggaagct cgtgatgttg acatatatgc atcgacgctg
      241 taggctcaaa ttggataaaa tcaaaaatag ggtttcgact atatttatac aaaaggatcg
      301 taaaaattat ttctcatgtt ctggtattcc ataaatattt ccatgatttg ttcttcaagt
      361 ttgttactag attttatgat caacacaaat catagtcaca atcacccttt tcacggttct
      421 ggtttattaa ttgtgtatgt ttagtattta tgtttgtttg tatgaataac gaccttaata
      481 aatgatcatg ctttcatttc agttgtatct tcttcttttc tttttttttt ttttttagca
      541 attacgagta tttttggtcg atcaggtatg aactgtgtga cataaacgtt atccacatta
      601 atcgataaac ctatttatac atataactgt tacgaactgg aaaccgggat catctactta
      661 attttgtaaa atatctttca tttttgtagc ttgagtgatg gggtgaaggt gtgagagaga
      721 gactatgaaa tcttgaggaa agaacttcta ggagataatg aggtggcgga atcactattg
      781 gaatctgatg aagcgttaac acgtaaccgc agggaaccgt tcggtggtgt tgatcgtgtt
      841 atagctaccc aatattcatg tgccaaaagg agttgttaat gaggtcgtag agcaaattgc
      901 atatgctgat catattatag tcaataaggt atatgtttat cgcgatacaa catagttact
      961 ccatgttata ttatggaaac gcaagacttt ggaattggtg atcgtcgaaa gtcaaacttg
     1021 caagaccttg aaagtcttac tggtggagag gtaattaccg atgagcttgg catgaaacct
     1081 tgagaaaatg gcaccagaaa tgctagggac gtggaaaaag gatcatggac atcagatcga
     1141 acttgacacg gctacaacca ccattgctgt gtgtgcttgc taatcgctgg tcttgggtgc
     1201 atttgggatg ggatatcagg gttgctatgt attgtatggc aagattacca tcaatgctgc
     1261 aaatttttgg tcccacctca tgccagtatt ggttgtttga aaagttgtgt gtcagcttgc
     1321 cacttgttgc gcatcctgga taatggctag actttgctgt tagcttaacc ccagtagcca
     1381 aatgaggctc actcacacac ttgtaaaaaa atgtaacaag atgtcaaaat ggttggaggt
     1441 gctcttgaag gtaaaagaat ggccccagat ctgggtatgt ttgcatcatt tacagaatta
     1501 gcaaagagag agtaccttta ttttggtggt tctgtattca acctttattt acagaattca
     1561 aaaggtgctt actttatgcc aattaagatt gtctcgcatc tgttttc
//
LOCUS       XR_011757118            1098 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839854), transcript variant X5, ncRNA.
ACCESSION   XR_011757118
VERSION     XR_011757118.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1098
                     /gene="LOC139839854"
                     /note="uncharacterized LOC139839854; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839854"
     ncRNA           1..1098
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839854"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839854"
ORIGIN      
        1 agaaacacgg aagaatgcaa taaaattagg ggttcaatca cacttggctc ctcgctccat
       61 ccgttcgatc atacactctc tacgaatcat gttttcgatt cgttcattaa ccttcatcat
      121 tcaagatatg ctgcaaaaat ccaattacca attgttcggt tcataccatc tatcatctat
      181 cttgagtgat ggggtgaagg tgtgagagag agactatgaa atcttgagga aagaacttct
      241 aggagataat gaggtggcgg aatcactatt ggaatctgat gaagcgttaa cacgtaaccg
      301 cagggaaccg ttcggtggtg ttgatcgtgt tatagctacc caatattcat gtgccaaaag
      361 gagttgttaa tgaggtcgta gagcaaattg catatgctga tcatattata gtcaataagg
      421 tatatgttta tcgcgataca acatagttac tccatgttat attatggaaa cgcaagactt
      481 tggaattggt gatcgtcgaa agtcaaactt gcaagacctt gaaagtctta ctggtggaga
      541 ggtaattacc gatgagcttg gcatgaaacc ttgagaaaat ggcaccagaa atgctaggga
      601 cgtggaaaaa ggatcatgga catcagatcg aacttgacac ggctacaacc accattgctg
      661 tgtgtgcttg ctaatcgctg gtcttgggtg catttgggat gggatatcag ggttgctatg
      721 tattgtatgg caagattacc atcaatgctg caaatttttg gtcccacctc atgccagtat
      781 tggttgtttg aaaagttgtg tgtcagcttg ccacttgttg cgcatcctgg ataatggcta
      841 gactttgctg ttagcttaac cccagtagcc aaatgaggct cactcacaca cttgtaaaaa
      901 aatgtaacaa gatgtcaaaa tggttggagg tgctcttgaa ggtaaaagaa tggccccaga
      961 tctgggtatg tttgcatcat ttacagaatt agcaaagaga gagtaccttt attttggtgg
     1021 ttctgtattc aacctttatt tacagaattc aaaaggtgct tactttatgc caattaagat
     1081 tgtctcgcat ctgttttc
//
LOCUS       XM_071830053            2133 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides two-component response
            regulator-like APRR5 (LOC139839856), mRNA.
ACCESSION   XM_071830053
VERSION     XM_071830053.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2133
                     /gene="LOC139839856"
                     /note="two-component response regulator-like APRR5;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139839856"
     CDS             120..1868
                     /gene="LOC139839856"
                     /codon_start=1
                     /product="two-component response regulator-like APRR5"
                     /protein_id="XP_071686154.1"
                     /db_xref="GeneID:139839856"
                     /translation="MGEVLADVPEMMMRKEDKTNDGGVSGRRDSPTITATTNNVVRWE
                     KFLPKMVLRVLLVEADDCTRQIISALLRKCSYKVAAVSDGLKAWEVLKGRSNNIDLIL
                     TEVELPSISGFALLTLIMEHQVCKNIPVIMMSANDSVSTVYKCMLRGAADFLVKPVRK
                     NELKNLWQHVWRRQSSNPGGNENQGESVLQQKIEATAENNATSNRSSGYIACIKRNRE
                     CIEKGSDAQSSCTKPDMEPEGSPMEQLKDLTDPNAYITEANTSGQEQNMAIDVRWEYV
                     NVADNNNSSREAIDLIGSLDSYPKASLKSSLNYSTNKVDHPSPILDLSLKQSHPSSSV
                     NQFSDDRYRLKQSDVSAFSRYINTTQPPLTSGSVSICNQQTNSDKPLSKNPVEYISDT
                     HSAPVASSQRNTISQHEQGGSQSQSQFQTPKETVFPVRVPSPRVETPVATYGSVLPPP
                     FFLQPGLVQMQSACSSGHQEPFVQANITEAHEDHSGTSSFGNGATLTRLNSVGSGSNG
                     NSSHRSIQREAALNKFRMKRKDRCFDKKVRYESRKKLAEQRPRVKGQFVRQGQKSNST
                     PMEVDTEFATTKVTVH"
     misc_feature    279..590
                     /gene="LOC139839856"
                     /note="pseudo receiver domain of pseudo-response
                     regulators; Region: psREC_PRR; cd17582"
                     /db_xref="CDD:381120"
     misc_feature    1668..1799
                     /gene="LOC139839856"
                     /note="CCT motif; Region: CCT; pfam06203"
                     /db_xref="CDD:461849"
     polyA_site      2133
                     /gene="LOC139839856"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catatcataa agtcataaca tttgttacgc accacacaaa cacatacatc ctctcgtttg
       61 attgcctaaa tacatacagt tttttttttt taatttagtt gtttgtgttg tataaaaata
      121 tgggggaagt gttagccgat gtgcccgaaa tgatgatgcg aaaggaagat aagacgaatg
      181 atggtggcgt cagtggtagg cgtgattcgc ccaccatcac cgccaccaca aacaacgttg
      241 ttaggtggga aaagtttttg cctaaaatgg ttcttagagt tttgttagtt gaagctgacg
      301 attgtactcg ccaaataatc tctgcactcc ttagaaaatg cagttataaa gttgcagctg
      361 tttctgatgg tttaaaggca tgggaggttc tgaaagggag atcaaacaac attgatctta
      421 tactgactga agtcgagctt ccatcgattt cagggtttgc tcttcttacc ttgattatgg
      481 aacatcaagt atgcaaaaat atccctgtta taatgatgtc ggcaaatgat tcggtaagca
      541 ccgtttacaa gtgtatgcta agaggtgctg ctgacttttt agtcaaacct gttaggaaga
      601 atgaattgaa gaacttatgg caacatgttt ggaggagaca atcttcaaac cctggtggta
      661 atgagaatca aggagagagt gttttacaac agaagataga agctactgct gaaaacaatg
      721 caactagcaa ccgttctagt ggttacatcg cttgcataaa aagaaatagg gaatgcattg
      781 aaaaaggaag tgatgctcag agctcttgca caaaacctga tatggaacca gagggttcac
      841 cgatggagca gctaaaagac ctcactgacc caaacgctta cataactgaa gccaatacaa
      901 gtggtcaaga acagaacatg gccatagatg tcagatggga atacgttaat gtcgctgata
      961 ataacaacag ttctcgggaa gcgattgact tgattgggtc actcgacagt tacccaaaag
     1021 ccagtttaaa aagctcttta aactacagta caaataaggt tgatcatcct tcaccaattt
     1081 tagatctttc gctaaaacaa tctcatccta gtagctcggt gaatcagttc agtgatgaca
     1141 gataccgttt gaagcaatct gatgtctcag ccttttcacg gtatattaat acgacacaac
     1201 cgccactaac ttcgggatct gtcagcattt gtaatcaaca aacaaattcg gataaaccgt
     1261 tatccaagaa tcctgttgag tatatttctg atacacatag tgcaccagtt gcaagttctc
     1321 aacgtaacac gataagtcaa cacgagcaag gtggaagtca aagtcaaagt caatttcaga
     1381 ctccgaagga aacagtgttt ccagttcgag ttccaagtcc acgagttgag accccggttg
     1441 ccacatatgg ttctgtactg cctcctccgt tctttttaca accgggcttg gtccagatgc
     1501 agagcgcgtg ttcctcgggc catcaagaac ctttcgttca agcaaatata accgaagccc
     1561 atgaagatca tagcggaact agtagtttcg gtaacggtgc aacgttaacc cgtctgaata
     1621 gtgtaggtag tggaagcaat gggaatagta gtcatcgatc aatacaacga gaagccgcac
     1681 taaataaatt ccgaatgaag aggaaagatc ggtgctttga taagaaggta agatatgaaa
     1741 gcagaaagaa actagcagag cagagaccca gggtaaaagg acaatttgtt cgtcaggggc
     1801 aaaaaagtaa ttctacacct atggaagttg atacagagtt tgctactaca aaggttacag
     1861 ttcattagta gttaccagat atggtaatgg cagatttcac ttcttctata tagggttttc
     1921 gaagttttag taagaacatg aagattctaa catggagttt tttacccaag atgattagtt
     1981 ttggaatgta aattttgtaa tatagaagta gtgatgtttt agcctttgat cataccaaag
     2041 gacatactat atgtagaggc ctagtagtag gtatttgatg gtttgtaaca ttttttctgt
     2101 tctgactaaa aatctaaagg gattcacagt tca
//
LOCUS       XR_011757119            1573 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839857), transcript variant X1, ncRNA.
ACCESSION   XR_011757119
VERSION     XR_011757119.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1573
                     /gene="LOC139839857"
                     /note="uncharacterized LOC139839857; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839857"
     ncRNA           1..1573
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839857"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839857"
ORIGIN      
        1 cttttctcaa ctttagggtt tgaccgtcca tcccaaaaac ctagccttct tccctttttc
       61 tccaatttcc cccaaatccc tagcagtaaa accccaatca atcttgacaa ttagttgtgt
      121 tttgatcttc attatttatt gttatgcatt attatagctg atctaacata cttatgcaca
      181 cacaaataca tgaatacagt aaccatacaa tcatcatcat catcatcatc atcatcatca
      241 tcatcttcac catataaaac caatatccct gtttcatcct tttctccatt ctaacacacg
      301 atttaacgat ttgaagcata aacaaggtat aacaggatgc atgcttgatt gcttccagct
      361 cttcagttgt tcattgaagt tagcattaac gacgactcag gtaattgagc ttatttatac
      421 tttctgtaat tacatattta tcatcacatg gtttttttat tgtttcccaa agagcttctt
      481 aatgttttaa tctattttat ttcgaggtct taattacatc catgtcaaaa ctgctatttt
      541 tcaatacttt gaatctaagc tacttcaaat actgtctgca caaacactgg atccagatgt
      601 agaacatttt atctcttcaa ttcgagccac gaagtatgcg atttctgccc tgaacaagac
      661 ataaactttt taaactgagt tttcttttga acttatgagt tgtgtgggta taatatcaag
      721 tgtgtcacag cgctattgct caatttttag tcagtgtgat actgaatatc gttataaaat
      781 atattatttt atcttaaagt tgtcatgaag atatgtacaa ctagagccac ttggaggagc
      841 aaggtatgcg gttattggta ttgctattat cattttttct ttatcacaca cgttttgttt
      901 gatgatggat tgtatttaaa atgttaaact ttacttacaa gtgttaggtt tacttaaaat
      961 tatttagttt tggtctccag atacaacaat gaaacattcc aatgttttta tccacacaaa
     1021 tggattagtg gccgatgata tacttgggaa tccatatgaa aaggcgatgt atattgttac
     1081 ccgaaagaag acgaaacttc aaggatagtc cttatggttt gttgaaaaca ttaaggttcg
     1141 caaagatgta ctacataaga tgccgagcta gaatcctatg aagaacatct atatttcgca
     1201 ctaaattaac aaaagctaca agattacatc aagaatatag aaggattatg taaccaatcg
     1261 agttattcga gccactcaat tctctttgtc ttgcatctct tcgcgatcca ttcataactc
     1321 ttcacttgta tatcatttag aacaatcgga ggggactaac atactttttt gaaaaccgtt
     1381 tgattccggt tttttcaaat gagataaagt gaagtccaca tggaagcttg ccaaactttt
     1441 gcaccaaaat ccgagcattg taaattagac ttaccgcaaa gaaggttttc aaaattagac
     1501 ttacatatta atattctaca tatacattca tatcttatat ctcattgttt cgatctctaa
     1561 acaatcaaaa act
//
LOCUS       XR_011757120            1528 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839857), transcript variant X2, ncRNA.
ACCESSION   XR_011757120
VERSION     XR_011757120.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1528
                     /gene="LOC139839857"
                     /note="uncharacterized LOC139839857; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839857"
     ncRNA           1..1528
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839857"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839857"
ORIGIN      
        1 cttttctcaa ctttagggtt tgaccgtcca tcccaaaaac ctagccttct tccctttttc
       61 tccaatttcc cccaaatccc tagcagtaaa accccaatca atcttgacaa ttagttgtgt
      121 tttgatcttc attatttatt gttatgcatt attatagctg atctaacata cttatgcaca
      181 cacaaataca tgaatacagt aaccatacaa tcatcatcat catcatcatc atcatcatca
      241 tcatcttcac catataaaac caatatccct gtttcatcct tttctccatt ctaacacacg
      301 atttaacgat ttgaagcata aacaaggtat aacaggatgc atgcttgatt gcttccagct
      361 cttcagttgt tcattgaagt tagcattaac gacgactcag gtaattgagc ttatttatac
      421 tttctgtaat tacatattta tcatcacatg gtttttttat tgtttcccaa agagcttctt
      481 aatgttttaa tctattttat ttcgaggtct taattacatc catgtcaaaa ctgctatttt
      541 tcaatacttt gaatctaagc tacttcaaat actgtctgca caaacactgg atccagatgt
      601 agaacatttt atctcttcaa ttcgagccac gaagtatgcg atttctgccc tgaacaagac
      661 ataaactttt taaactgagt tttcttttga acttatgagt tgtgtgggta taatatcaag
      721 tgtgtcacag cgctattgct caatttttag tcagtgtgat actgaatatc gttataaaat
      781 atattatttt atcttaaagt tgtcatgaag atatgtacaa ctagagccac ttggaggagc
      841 aaggtatgcg gttattggta ttgctattat cattttttct ttatcacaca cgttttgttt
      901 gatgatggat tgtatttaaa atgttaaact ttacttacaa gtgttaggtt tacttaaaat
      961 tatttagttt tggtctccag atacaacaat gaaacattcc aatgttttta tccacacaaa
     1021 tggattagtg gccgatgata tacttgggaa tccatatgaa aaggcgatgt atattgttac
     1081 ccgaaagaag gttcgcaaag atgtactaca taagatgccg agctagaatc ctatgaagaa
     1141 catctatatt tcgcactaaa ttaacaaaag ctacaagatt acatcaagaa tatagaagga
     1201 ttatgtaacc aatcgagtta ttcgagccac tcaattctct ttgtcttgca tctcttcgcg
     1261 atccattcat aactcttcac ttgtatatca tttagaacaa tcggagggga ctaacatact
     1321 tttttgaaaa ccgtttgatt ccggtttttt caaatgagat aaagtgaagt ccacatggaa
     1381 gcttgccaaa cttttgcacc aaaatccgag cattgtaaat tagacttacc gcaaagaagg
     1441 ttttcaaaat tagacttaca tattaatatt ctacatatac attcatatct tatatctcat
     1501 tgtttcgatc tctaaacaat caaaaact
//
LOCUS       XR_011757121            1368 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839857), transcript variant X3, ncRNA.
ACCESSION   XR_011757121
VERSION     XR_011757121.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1368
                     /gene="LOC139839857"
                     /note="uncharacterized LOC139839857; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839857"
     ncRNA           1..1368
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839857"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839857"
ORIGIN      
        1 cttttctcaa ctttagggtt tgaccgtcca tcccaaaaac ctagccttct tccctttttc
       61 tccaatttcc cccaaatccc tagcagtaaa accccaatca atcttgacaa ttagttgtgt
      121 tttgatcttc attatttatt gttatgcatt attatagctg atctaacata cttatgcaca
      181 cacaaataca tgaatacagt aaccatacaa tcatcatcat catcatcatc atcatcatca
      241 tcatcttcac catataaaac caatatccct gtttcatcct tttctccatt ctaacacacg
      301 atttaacgat ttgaagcata aacaaggtat aacaggatgc atgcttgatt gcttccagct
      361 cttcagttgt tcattgaagt tagcattaac gacgactcag gtaattgagc ttatttatac
      421 tttctgtaat tacatattta tcatcacatg gtttttttat tgtttcccaa agagcttctt
      481 aatgttttaa tctattttat ttcgaggtct taattacatc catgtcaaaa ctgctatttt
      541 tcaatacttt gaatctaagc tacttcaaat actgtctgca caaacactgg atccagatgt
      601 agaacatttt atctcttcaa ttcgagccac gaagtatgcg atttctgccc tgaacaagac
      661 ataaactttt taaactgagt tttcttttga acttatgagt tgtgtgggta taatatcaag
      721 tgtgtcacag cgctattgct caatttttag tcagtgtgat actgaatatc gttataaaat
      781 atattatttt atcttaaagt tgtcatgaag atatgtacaa ctagagccac ttggaggagc
      841 aaggtatgcg gttattggta ttgctattat cattttttct ttatcacaca cgttttgttt
      901 gatgatggat tgtatttaaa atgttaaact ttacttacaa gtgttaggtt tacttaaaat
      961 tatttagttt tggtctccag atacaacaat gaaacattcc aatgttttta tccacacaaa
     1021 tggattagtg gccgatgata tacttgggaa tccatatgaa aaggcgatgt atattgttac
     1081 ccgaaagaag acgaaacttc aaggatagtc cttatggttt gttgaaaaca ttaagaacaa
     1141 tcggagggga ctaacatact tttttgaaaa ccgtttgatt ccggtttttt caaatgagat
     1201 aaagtgaagt ccacatggaa gcttgccaaa cttttgcacc aaaatccgag cattgtaaat
     1261 tagacttacc gcaaagaagg ttttcaaaat tagacttaca tattaatatt ctacatatac
     1321 attcatatct tatatctcat tgtttcgatc tctaaacaat caaaaact
//
LOCUS       XM_071830054             760 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides translationally-controlled
            tumor protein homolog (LOC139839858), mRNA.
ACCESSION   XM_071830054
VERSION     XM_071830054.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..760
                     /gene="LOC139839858"
                     /note="translationally-controlled tumor protein homolog;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 34 Proteins"
                     /db_xref="GeneID:139839858"
     CDS             127..633
                     /gene="LOC139839858"
                     /codon_start=1
                     /product="translationally-controlled tumor protein
                     homolog"
                     /protein_id="XP_071686155.1"
                     /db_xref="GeneID:139839858"
                     /translation="MLVYQDLLTGDELLSDSFPYKEILNGILWEVEGKWVVQGAVDVN
                     IGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVAYIKKYIKQITPKL
                     DAEQQEFFKKNIEAATKYLLAKLSDLQFFVGESMHDDSGMVFAYYKEGATDPTFLYFG
                     VGLKEVKC"
     misc_feature    127..615
                     /gene="LOC139839858"
                     /note="Translationally controlled tumour protein; Region:
                     TCTP; pfam00838"
                     /db_xref="CDD:459957"
     polyA_site      760
                     /gene="LOC139839858"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataagaatcc aaatccaacc ctgctttcat tattgctgtc tataaaagcc cttaaaatcc
       61 cccattctct tccgtctctt ttgtttcaat cgattctcaa cccttaaatc tttagctttc
      121 ggcaatatgt tggtttatca ggatttgctt acaggagatg agcttctttc ggactcgttt
      181 ccatacaagg aaattttgaa tgggattctt tgggaagttg aaggaaagtg ggtcgttcaa
      241 ggagctgtcg atgttaacat cggcgcaaac ccttctgctg aaggaggtgg tgatgatgaa
      301 ggggttgatg atcaagctgt gaaggttgtt gatattgttg acacctttag acttcaggag
      361 caacctccat ttgataagaa gcagtttgtt gcttatatta agaagtacat taagcaaatt
      421 acccctaagc ttgatgcaga gcagcaagag tttttcaaaa agaacattga ggcggcaaca
      481 aagtaccttc tcgcaaagct cagtgacctc caattttttg ttggggagag tatgcatgat
      541 gacagtggaa tggtgtttgc ttattacaag gaaggtgcaa ctgacccaac gttcttgtac
      601 tttggtgttg gtttgaagga ggtcaagtgt taagtttcta gtttcattga gcttataata
      661 ttatgtactc tttaaacaag tattgtaggg ttaagttaaa ttctggattg ttattgctgt
      721 ttcgaattca gttttatgaa agtgtgtgag gtattttttt
//
LOCUS       XR_011757122            2107 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839859), ncRNA.
ACCESSION   XR_011757122
VERSION     XR_011757122.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2107
                     /gene="LOC139839859"
                     /note="uncharacterized LOC139839859; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839859"
     ncRNA           1..2107
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839859"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839859"
ORIGIN      
        1 tatataaaaa atataataat aataatattg taaccataat ataaatactc accggcgtct
       61 taaaagaaaa tgtgttgtta tccattgtcg tctacattat attatatcat attcaaaagg
      121 gtaatacaat taggtaatat gtttgtaatt aaaataataa ccataaaaaa agtatggaag
      181 gaagtaagat tagagtaata agttaccgtt tataaaaggg taggagttta tagtcatgga
      241 attgcacttt taataggatt ccatacgtgg ttggctacaa tcaatcaagt tgataagttg
      301 ttactaatgt aaaaatatta atcaatattt gatttgattc aagaaagaga tacaaataca
      361 agaataagta tgaaccccac ctgtacacct agagccttgg ctgtaaccaa actggaactc
      421 tgtacacgga cttttaaacc agtcattgtg caacctcgga acatacctct tgtaccaccc
      481 gagactattt ttcataaggt tgaatttttc agattttttg tcactgtact ctttcaagtt
      541 catgataaag atgttgtaac actcatcgct agtcattttg gtgaacatgt catcaacgtc
      601 ttcaatcatc acctcaatga ggctatttat ctccaaactc aaaagcattc tgaaatcaaa
      661 gcaaattaat taattaaaaa aaaaattaat aaaaaaaatt gataaataaa catgaatgaa
      721 tagaacaata gaaaagtaac ataataatcc ataaatatat ccctaactag gtgttattaa
      781 ggcacatgag aagaataaaa aagggtccaa aattgaatgt aattgttacg aatgattttt
      841 tgaaccttac taatcaaaca aaacgaatca aaaaaaaaga aagaagagtc gtacaaaagt
      901 gagtgagtta ttgaaggtga gatacgatga atataagaac ctacggtttg atgatcggtg
      961 agtttactat actattatta ttactctact ctgcataatt gtgttacttt cgattttaat
     1021 ttaaatttaa tgtattgtag acgacgatgg ctaagggcgc atattctttt aagaacgccc
     1081 tgttcttctt cccgctactt tgaggaattt ggtattcggg tgaatagtga tagtgactgg
     1141 agagatattg ggctggagga catcgttcca gataaaaatc atcagggaat ttgatagata
     1201 tttacaacat gtgaagggat ataggatggt gggaaatgat agatatttac aacatgtgaa
     1261 gggaaaggtg aaggagttgt cactcgattt gaaaaacata acccaactat atattgaata
     1321 tgcccttcca tttagacttt gggagatatg tttggaaatg gtcttttttg caacccattc
     1381 aggtgatact gagaggaaca tgataataga catgtggcgt tgctgaagct tgttccctcc
     1441 taataatgac cggttcacac gaacacgata ggcctctaga atggttatgt ctacagctcc
     1501 tcgaagaaaa agcagcagca ttggcatgaa ctcttcttca tctttctctg attcatactt
     1561 ccacgagggt attttagaca ttttacttga taaatggttg acttttttat atgcagggta
     1621 gccttgagga ggttgttggt gatgaagatg ttgcaagatc acttctggcg gctgtcaatg
     1681 gaagagtaca acctatttta agcgcggcgt ataattggtt gttatggaat agacctcgag
     1741 atattccgtt gccctggtat cttagagtga ggcttttgcg gtctgtatta gtagtcattc
     1801 gtgaatggac atagtctgtt tgtgtttctg catcagctgc ttgtctcatg cccatggtca
     1861 cttgtaagct agccagtctt gtaaacaggt acttgattga acttaacgtt attgcattgg
     1921 agttaccaac accaactcca ctttttgagg aactccgagt tgagctaaaa agaggtttta
     1981 gggaggttgt agaatgtgtt ttaagctttg aaggagtttt gtcgtcttat gatcgttctg
     2041 ataatccttt ctttaatgaa gctgtttaat gaaccagctg agactactac gtaggtaggt
     2101 agcttaa
//
LOCUS       XM_071830055            3802 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyprotein of EF-Ts,
            chloroplastic-like (LOC139839860), transcript variant X1, mRNA.
ACCESSION   XM_071830055
VERSION     XM_071830055.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3802
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3802
                     /gene="LOC139839860"
                     /note="polyprotein of EF-Ts, chloroplastic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839860"
     CDS             204..3605
                     /gene="LOC139839860"
                     /codon_start=1
                     /product="polyprotein of EF-Ts, chloroplastic-like isoform
                     X1"
                     /protein_id="XP_071686156.1"
                     /db_xref="GeneID:139839860"
                     /translation="MTPVIPSSTSNISLIPGPTFSTKKTISSIKCCNLTRSTRRTLYA
                     QDCVLLLSTSLRLFPHIRTFGLQHKQRFAVASATEVDVAVEQADQSDVPVSEQESGQT
                     SEPTSTVDKSKQRSRPVRKSEMPPVKDEELVPGASFTGKVRSIQPFGAFVDFGAFTDG
                     LVHVSRLSEGYVKDVASVVSVGQEVKVKLVEANIETGRIALTMRESEPASGGDTSRPP
                     RRTGQKSNQRQEGRKSTKFVKGQDLEGTVKNLTRSGAFINLPDGEEGFLPASEEADEG
                     FGSIMGTGSSLEIGQEVKVRVLRIARGQVTLTMKKDEDNNALDSKLQGKVFTATNPFL
                     VAFRQNKDIASFLDDREKAEETTEAEVKLEASVDETEEVKPVSDEEVKPDIVSNESQV
                     IVPVTEENVIEASVSDSISTEEKVEIPEETISSEQVDDDIILENVNEDSDVKIEPVSG
                     ENGSITSEEQVEIPEEAPVLDENVIAVDAEIPDAVPVGELIENQLEEPETKVETDAEI
                     AVPVAEEKVEAVEETITKVDAEIPDAVPVAEVKDSQPEEPETKAEADTEIVVPVAEEK
                     VEEVAAAVENTTKEAEIPDGVQVSEVIESQPEEPETKAEADTEIEVPVAEEKVEAVSA
                     PVETTTKDAEIPDAIPIGEVIENQPEEPVTKAETDTEIVVPVAEEKVEAVSAPVETAT
                     KATISPALVKQLREETGAGMMDCKKALKETEGDLVKAQEYLRKKGLASADKKASRATA
                     EGRIGSYIHDSRIGVLVEVNCETDFVSRGDIFKELVNDLAMQVAACPQVQYLSTEDVP
                     ADIIAKEREIEMQKEDLLSKPEQFRSKIVDGRIKKRLDELALLEQAYIKDDKVVVKDF
                     IKSTIATIGENMKVKRFVRFNLGEGLEKRSQDFAAEVAAQTTAKKVSAPTTEPQPAAT
                     ENVDTANEAPKAAISAALVKQLREETGAGMMDCKKALSETGGDLVKAQEYLRKKGLST
                     ADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGRSEKFKELVDDLAMQVVACPK
                     VEYVSIEDIPESIVSKERDIEMQREDILSKPEGIRGKIVDGRVAKRLGELALLEQPFL
                     KDDSVLVKDFVKQTVAAIGENIKVRRFIRFTLGESSETKSEETES"
     misc_feature    <591..1103
                     /gene="LOC139839860"
                     /note="Ribosomal protein S1 [Translation, ribosomal
                     structure and biogenesis]; Region: RpsA; COG0539"
                     /db_xref="CDD:440305"
     misc_feature    <1332..2000
                     /gene="LOC139839860"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional; Region: PTZ00341"
                     /db_xref="CDD:173534"
     misc_feature    <1809..2282
                     /gene="LOC139839860"
                     /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
                     /db_xref="CDD:236766"
     misc_feature    2253..2846
                     /gene="LOC139839860"
                     /note="elongation factor Ts; Reviewed; Region: tsf;
                     PRK12332"
                     /db_xref="CDD:183447"
     misc_feature    2979..3569
                     /gene="LOC139839860"
                     /note="elongation factor Ts; Reviewed; Region: tsf;
                     PRK12332"
                     /db_xref="CDD:183447"
     polyA_site      3802
                     /gene="LOC139839860"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataagggttt aaagacccac ccacctttca tttccctctt tttcatactc actccattcg
       61 cggatagcaa atatatcaca cctcaatccg taaaccttca ttcaaaaggg tgaagacgct
      121 gatgaataat tagcctagtt actgatctaa cgaaactgaa ccaaaccgga cctaaccata
      181 ctcgattcat ctttggagtc aagatgacgc ctgttatccc ttcatcaaca agcaatatct
      241 ctcttatacc tgggcccact ttcagtacaa aaaagaccat cagttcgata aaatgctgta
      301 atctaacaag atccaccaga agaacactat acgctcaaga ttgtgtatta ctgttgtcaa
      361 catcccttag attatttccg catatcagaa cgtttggttt acaacacaaa caaagatttg
      421 cagtagcatc ggctaccgag gtcgatgtag ctgtggaaca agctgaccaa tcagatgttc
      481 cggtttctga acaagagtca ggtcaaacat cagaaccaac atcaacggtt gacaagtcaa
      541 aacaaagatc acgacctgtc agaaagagtg aaatgccacc tgtgaaagat gaagaattgg
      601 ttccgggtgc aagtttcaca ggtaaagtaa gatcgatcca accgtttgga gcgtttgttg
      661 actttggtgc atttacagac gggctagttc acgtttcacg gttaagtgag ggttacgtga
      721 aggatgttgc gagtgttgtt tcggtaggac aagaagtgaa ggtgaagtta gtcgaggcaa
      781 atattgaaac gggtcgaatc gcgttgacca tgcgggaaag tgagcccgcg agtggtggtg
      841 atacgtctcg acctcctaga agaacgggtc aaaagtcaaa ccagaggcaa gaggggagaa
      901 aaagtacaaa gtttgtgaag ggtcaagatc ttgagggtac cgtaaagaat cttacaagat
      961 cgggtgcatt tataaatcta cccgatgggg aggaagggtt tttgcccgct tcggaagaag
     1021 ccgacgaagg gttcggaagt ataatgggta cggggtcatc gctcgagatt ggtcaagaag
     1081 tcaaagttcg ggtcttgcgt attgcaaggg gtcaagtaac gttgactatg aagaaagatg
     1141 aagataataa tgctttggac tcgaagcttc aaggaaaagt ttttacagct acaaaccctt
     1201 ttcttgtagc ttttcgtcaa aataaagata tagcttcgtt tttggatgat agagaaaaag
     1261 ccgaggagac aaccgaggct gaagtcaaac ttgaagcatc ggttgacgag actgaagaag
     1321 tcaaacctgt ttctgatgaa gaggtcaaac ctgacattgt gtctaatgaa tcacaagtaa
     1381 ttgtacccgt aactgaagaa aatgtaattg aagcatcggt ttccgatagc atttcaaccg
     1441 aagagaaagt agagataccc gaggaaacaa tttcaagtga acaagtagat gacgatataa
     1501 tcctggaaaa cgtgaatgaa gattcagatg taaaaatcga acccgtttct ggtgaaaatg
     1561 gtagcattac aagtgaagaa caagtagaga tacctgagga ggcccctgta ctagacgaaa
     1621 acgtaatcgc agttgatgcc gaaattcccg atgccgtacc agttggtgaa ctcatagaga
     1681 atcaacttga ggaaccggaa acaaaagtcg aaacggatgc cgaaattgcg gttccagttg
     1741 cagaagaaaa agttgaagca gttgaagaaa ccatcacaaa agtagatgcc gaaattcccg
     1801 atgccgtgcc agttgctgaa gtcaaagata gtcaacccga ggaaccggaa acaaaagccg
     1861 aagctgatac cgaaattgtg gttcctgttg cagaagaaaa agttgaagaa gttgctgccg
     1921 ctgtggaaaa cacgacaaaa gaagctgaaa ttcccgatgg cgtacaagtt agcgaagtca
     1981 tagagagtca acccgaagaa ccggaaacaa aagccgaagc tgataccgaa atcgaggttc
     2041 cagttgcaga agaaaaagtt gaagccgttt ctgcccctgt tgaaactacc acaaaagatg
     2101 ccgaaattcc cgatgccata ccaattggcg aagtcataga gaatcaaccc gaggaaccgg
     2161 taacaaaagc cgaaacagat accgaaattg tggttccagt tgcagaagaa aaagttgaag
     2221 ccgtttctgc ccctgtggaa accgccacaa aagcaacaat atcaccggct cttgtgaagc
     2281 aactacgtga agaaacaggt gcgggtatga tggactgcaa gaaagcactt aaagaaaccg
     2341 agggcgattt ggtcaaagca caagaatacc taagaaagaa agggttagca agtgctgaca
     2401 aaaaggcgag ccgggccaca gccgaaggta gaatcgggtc ctacattcac gatagcagaa
     2461 tcggggtcct tgtagaagtc aactgcgaga ccgatttcgt atcacgtggc gacattttta
     2521 aagaactagt caacgatttg gcaatgcaag ttgcagcttg tccacaggtt cagtatctat
     2581 ccacagaaga cgttcctgct gacatcatcg caaaagaaag agaaatcgag atgcaaaaag
     2641 aagatctttt gtcaaaaccc gagcaattta ggtctaaaat tgttgacggg agaatcaaga
     2701 agaggcttga tgagctggca ttgcttgaac aggcttacat taaggacgat aaggttgtgg
     2761 tcaaagattt tataaagtca acgattgcaa caattggaga aaatatgaaa gtcaaacggt
     2821 ttgtaaggtt caaccttggt gaagggttgg aaaagagaag tcaagatttt gctgctgaag
     2881 ttgctgcaca aactacagcc aagaaggtgt ctgcaccaac aaccgagccg caacctgcag
     2941 ccaccgaaaa tgttgacacc gcaaatgagg caccgaaagc agcaatttca gccgcgttgg
     3001 taaagcaact acgtgaagaa actggtgcag gtatgatgga ctgcaaaaag gctctttctg
     3061 aaaccggggg agaccttgtg aaggcacaag agtatctacg aaagaaaggt ctatcaaccg
     3121 ctgacaaaaa atcaagtcgt ttagcagccg aaggtagaat cgggtcctac attcacgatt
     3181 ctcgtatcgg tgtccttatc gaagtcaact gtgaaaccga ctttgtgggt agaagtgaaa
     3241 agtttaaaga attagttgac gatttagcca tgcaagtcgt tgcatgccca aaagtggagt
     3301 acgtttcgat tgaagatatt cccgagagta ttgtgagtaa agagagagat atcgagatgc
     3361 aacgagaaga tattttgtcg aaacccgagg gtataagggg aaagattgtg gacgggcggg
     3421 ttgcaaagag gcttggggaa cttgcgcttc ttgagcaacc gtttctgaaa gatgattcgg
     3481 ttcttgtgaa agattttgtg aagcagacag tggcggctat tggtgagaac attaaggtta
     3541 ggaggttcat tcggtttaca ctcggtgagt cgagtgagac taaatctgaa gaaaccgagt
     3601 cttgaggtta cagagttggt agtaccaagg tctgtttgag tttttcaaaa ggcagttgtt
     3661 tctttttgca tttttgacat tgttggatta taatttttag agattttgtc ggtactgtgt
     3721 aacatactac agtctttaaa acttgtaaca ctatcttaag ttactattct atatttattt
     3781 atatataacc attcccgttt tc
//
LOCUS       XM_071830056            3799 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyprotein of EF-Ts,
            chloroplastic-like (LOC139839860), transcript variant X2, mRNA.
ACCESSION   XM_071830056
VERSION     XM_071830056.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3799
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3799
                     /gene="LOC139839860"
                     /note="polyprotein of EF-Ts, chloroplastic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839860"
     CDS             204..3602
                     /gene="LOC139839860"
                     /codon_start=1
                     /product="polyprotein of EF-Ts, chloroplastic-like isoform
                     X2"
                     /protein_id="XP_071686157.1"
                     /db_xref="GeneID:139839860"
                     /translation="MTPVIPSSTSNISLIPGPTFSTKKTISSIKCCNLTRSTRRTLYA
                     QDCVLLLSTSLRLFPHIRTFGLQHKQRFAVASATEVDVAVEQADQSDVPVSEQESGQT
                     SEPTSTVDKSKQRSRPVRKSEMPPVKDEELVPGASFTGKVRSIQPFGAFVDFGAFTDG
                     LVHVSRLSEGYVKDVASVVSVGQEVKVKLVEANIETGRIALTMRESEPASGGDTSRPP
                     RRTGQKSNQRQEGRKSTKFVKGQDLEGTVKNLTRSGAFINLPDGEEGFLPASEEADEG
                     FGSIMGTGSSLEIGQEVKVRVLRIARGQVTLTMKKDEDNNALDSKLQGKVFTATNPFL
                     VAFRQNKDIASFLDDREKAEETTEAEVKLEASVDETEEVKPVSDEEVKPDIVSNESQV
                     IVPVTEENVIEASVSDSISTEEKVEIPEETISSEQVDDDIILENVNEDSDVKIEPVSG
                     ENGSITSEEQVEIPEEAPVLDENVIAVDAEIPDAVPVGELIENQLEEPETKVETDAEI
                     AVPVAEEKVEAVEETITKDAEIPDAVPVAEVKDSQPEEPETKAEADTEIVVPVAEEKV
                     EEVAAAVENTTKEAEIPDGVQVSEVIESQPEEPETKAEADTEIEVPVAEEKVEAVSAP
                     VETTTKDAEIPDAIPIGEVIENQPEEPVTKAETDTEIVVPVAEEKVEAVSAPVETATK
                     ATISPALVKQLREETGAGMMDCKKALKETEGDLVKAQEYLRKKGLASADKKASRATAE
                     GRIGSYIHDSRIGVLVEVNCETDFVSRGDIFKELVNDLAMQVAACPQVQYLSTEDVPA
                     DIIAKEREIEMQKEDLLSKPEQFRSKIVDGRIKKRLDELALLEQAYIKDDKVVVKDFI
                     KSTIATIGENMKVKRFVRFNLGEGLEKRSQDFAAEVAAQTTAKKVSAPTTEPQPAATE
                     NVDTANEAPKAAISAALVKQLREETGAGMMDCKKALSETGGDLVKAQEYLRKKGLSTA
                     DKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGRSEKFKELVDDLAMQVVACPKV
                     EYVSIEDIPESIVSKERDIEMQREDILSKPEGIRGKIVDGRVAKRLGELALLEQPFLK
                     DDSVLVKDFVKQTVAAIGENIKVRRFIRFTLGESSETKSEETES"
     misc_feature    <591..1103
                     /gene="LOC139839860"
                     /note="Ribosomal protein S1 [Translation, ribosomal
                     structure and biogenesis]; Region: RpsA; COG0539"
                     /db_xref="CDD:440305"
     misc_feature    <1320..1862
                     /gene="LOC139839860"
                     /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
                     /db_xref="CDD:236766"
     misc_feature    <1806..2279
                     /gene="LOC139839860"
                     /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
                     /db_xref="CDD:236766"
     misc_feature    2250..2843
                     /gene="LOC139839860"
                     /note="elongation factor Ts; Reviewed; Region: tsf;
                     PRK12332"
                     /db_xref="CDD:183447"
     misc_feature    2976..3566
                     /gene="LOC139839860"
                     /note="elongation factor Ts; Reviewed; Region: tsf;
                     PRK12332"
                     /db_xref="CDD:183447"
     polyA_site      3799
                     /gene="LOC139839860"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataagggttt aaagacccac ccacctttca tttccctctt tttcatactc actccattcg
       61 cggatagcaa atatatcaca cctcaatccg taaaccttca ttcaaaaggg tgaagacgct
      121 gatgaataat tagcctagtt actgatctaa cgaaactgaa ccaaaccgga cctaaccata
      181 ctcgattcat ctttggagtc aagatgacgc ctgttatccc ttcatcaaca agcaatatct
      241 ctcttatacc tgggcccact ttcagtacaa aaaagaccat cagttcgata aaatgctgta
      301 atctaacaag atccaccaga agaacactat acgctcaaga ttgtgtatta ctgttgtcaa
      361 catcccttag attatttccg catatcagaa cgtttggttt acaacacaaa caaagatttg
      421 cagtagcatc ggctaccgag gtcgatgtag ctgtggaaca agctgaccaa tcagatgttc
      481 cggtttctga acaagagtca ggtcaaacat cagaaccaac atcaacggtt gacaagtcaa
      541 aacaaagatc acgacctgtc agaaagagtg aaatgccacc tgtgaaagat gaagaattgg
      601 ttccgggtgc aagtttcaca ggtaaagtaa gatcgatcca accgtttgga gcgtttgttg
      661 actttggtgc atttacagac gggctagttc acgtttcacg gttaagtgag ggttacgtga
      721 aggatgttgc gagtgttgtt tcggtaggac aagaagtgaa ggtgaagtta gtcgaggcaa
      781 atattgaaac gggtcgaatc gcgttgacca tgcgggaaag tgagcccgcg agtggtggtg
      841 atacgtctcg acctcctaga agaacgggtc aaaagtcaaa ccagaggcaa gaggggagaa
      901 aaagtacaaa gtttgtgaag ggtcaagatc ttgagggtac cgtaaagaat cttacaagat
      961 cgggtgcatt tataaatcta cccgatgggg aggaagggtt tttgcccgct tcggaagaag
     1021 ccgacgaagg gttcggaagt ataatgggta cggggtcatc gctcgagatt ggtcaagaag
     1081 tcaaagttcg ggtcttgcgt attgcaaggg gtcaagtaac gttgactatg aagaaagatg
     1141 aagataataa tgctttggac tcgaagcttc aaggaaaagt ttttacagct acaaaccctt
     1201 ttcttgtagc ttttcgtcaa aataaagata tagcttcgtt tttggatgat agagaaaaag
     1261 ccgaggagac aaccgaggct gaagtcaaac ttgaagcatc ggttgacgag actgaagaag
     1321 tcaaacctgt ttctgatgaa gaggtcaaac ctgacattgt gtctaatgaa tcacaagtaa
     1381 ttgtacccgt aactgaagaa aatgtaattg aagcatcggt ttccgatagc atttcaaccg
     1441 aagagaaagt agagataccc gaggaaacaa tttcaagtga acaagtagat gacgatataa
     1501 tcctggaaaa cgtgaatgaa gattcagatg taaaaatcga acccgtttct ggtgaaaatg
     1561 gtagcattac aagtgaagaa caagtagaga tacctgagga ggcccctgta ctagacgaaa
     1621 acgtaatcgc agttgatgcc gaaattcccg atgccgtacc agttggtgaa ctcatagaga
     1681 atcaacttga ggaaccggaa acaaaagtcg aaacggatgc cgaaattgcg gttccagttg
     1741 cagaagaaaa agttgaagca gttgaagaaa ccatcacaaa agatgccgaa attcccgatg
     1801 ccgtgccagt tgctgaagtc aaagatagtc aacccgagga accggaaaca aaagccgaag
     1861 ctgataccga aattgtggtt cctgttgcag aagaaaaagt tgaagaagtt gctgccgctg
     1921 tggaaaacac gacaaaagaa gctgaaattc ccgatggcgt acaagttagc gaagtcatag
     1981 agagtcaacc cgaagaaccg gaaacaaaag ccgaagctga taccgaaatc gaggttccag
     2041 ttgcagaaga aaaagttgaa gccgtttctg cccctgttga aactaccaca aaagatgccg
     2101 aaattcccga tgccatacca attggcgaag tcatagagaa tcaacccgag gaaccggtaa
     2161 caaaagccga aacagatacc gaaattgtgg ttccagttgc agaagaaaaa gttgaagccg
     2221 tttctgcccc tgtggaaacc gccacaaaag caacaatatc accggctctt gtgaagcaac
     2281 tacgtgaaga aacaggtgcg ggtatgatgg actgcaagaa agcacttaaa gaaaccgagg
     2341 gcgatttggt caaagcacaa gaatacctaa gaaagaaagg gttagcaagt gctgacaaaa
     2401 aggcgagccg ggccacagcc gaaggtagaa tcgggtccta cattcacgat agcagaatcg
     2461 gggtccttgt agaagtcaac tgcgagaccg atttcgtatc acgtggcgac atttttaaag
     2521 aactagtcaa cgatttggca atgcaagttg cagcttgtcc acaggttcag tatctatcca
     2581 cagaagacgt tcctgctgac atcatcgcaa aagaaagaga aatcgagatg caaaaagaag
     2641 atcttttgtc aaaacccgag caatttaggt ctaaaattgt tgacgggaga atcaagaaga
     2701 ggcttgatga gctggcattg cttgaacagg cttacattaa ggacgataag gttgtggtca
     2761 aagattttat aaagtcaacg attgcaacaa ttggagaaaa tatgaaagtc aaacggtttg
     2821 taaggttcaa ccttggtgaa gggttggaaa agagaagtca agattttgct gctgaagttg
     2881 ctgcacaaac tacagccaag aaggtgtctg caccaacaac cgagccgcaa cctgcagcca
     2941 ccgaaaatgt tgacaccgca aatgaggcac cgaaagcagc aatttcagcc gcgttggtaa
     3001 agcaactacg tgaagaaact ggtgcaggta tgatggactg caaaaaggct ctttctgaaa
     3061 ccgggggaga ccttgtgaag gcacaagagt atctacgaaa gaaaggtcta tcaaccgctg
     3121 acaaaaaatc aagtcgttta gcagccgaag gtagaatcgg gtcctacatt cacgattctc
     3181 gtatcggtgt ccttatcgaa gtcaactgtg aaaccgactt tgtgggtaga agtgaaaagt
     3241 ttaaagaatt agttgacgat ttagccatgc aagtcgttgc atgcccaaaa gtggagtacg
     3301 tttcgattga agatattccc gagagtattg tgagtaaaga gagagatatc gagatgcaac
     3361 gagaagatat tttgtcgaaa cccgagggta taaggggaaa gattgtggac gggcgggttg
     3421 caaagaggct tggggaactt gcgcttcttg agcaaccgtt tctgaaagat gattcggttc
     3481 ttgtgaaaga ttttgtgaag cagacagtgg cggctattgg tgagaacatt aaggttagga
     3541 ggttcattcg gtttacactc ggtgagtcga gtgagactaa atctgaagaa accgagtctt
     3601 gaggttacag agttggtagt accaaggtct gtttgagttt ttcaaaaggc agttgtttct
     3661 ttttgcattt ttgacattgt tggattataa tttttagaga ttttgtcggt actgtgtaac
     3721 atactacagt ctttaaaact tgtaacacta tcttaagtta ctattctata tttatttata
     3781 tataaccatt cccgttttc
//
LOCUS       XM_071830057            3796 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyprotein of EF-Ts,
            chloroplastic-like (LOC139839860), transcript variant X3, mRNA.
ACCESSION   XM_071830057
VERSION     XM_071830057.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3796
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3796
                     /gene="LOC139839860"
                     /note="polyprotein of EF-Ts, chloroplastic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839860"
     CDS             204..3599
                     /gene="LOC139839860"
                     /codon_start=1
                     /product="polyprotein of EF-Ts, chloroplastic-like isoform
                     X3"
                     /protein_id="XP_071686158.1"
                     /db_xref="GeneID:139839860"
                     /translation="MTPVIPSSTSNISLIPGPTFSTKKTISSIKCCNLTRSTRRTLYA
                     QDCVLLLSTSLRLFPHIRTFGLQHKQRFAVASATEVDVAVEQADQSDVPVSEQESGQT
                     SEPTSTVDKSKQRSRPVRKSEMPPVKDEELVPGASFTGKVRSIQPFGAFVDFGAFTDG
                     LVHVSRLSEGYVKDVASVVSVGQEVKVKLVEANIETGRIALTMRESEPASGGDTSRPP
                     RRTGQKSNQRQEGRKSTKFVKGQDLEGTVKNLTRSGAFINLPDGEEGFLPASEEADEG
                     FGSIMGTGSSLEIGQEVKVRVLRIARGQVTLTMKKDEDNNALDSKLQGKVFTATNPFL
                     VAFRQNKDIASFLDDREKAEETTEAEVKLEASVDETEEVKPVSDEEVKPDIVSNESQV
                     IVPVTEENVIEASVSDSISTEEKVEIPEETISSEQVDDDIILENVNEDVKIEPVSGEN
                     GSITSEEQVEIPEEAPVLDENVIAVDAEIPDAVPVGELIENQLEEPETKVETDAEIAV
                     PVAEEKVEAVEETITKVDAEIPDAVPVAEVKDSQPEEPETKAEADTEIVVPVAEEKVE
                     EVAAAVENTTKEAEIPDGVQVSEVIESQPEEPETKAEADTEIEVPVAEEKVEAVSAPV
                     ETTTKDAEIPDAIPIGEVIENQPEEPVTKAETDTEIVVPVAEEKVEAVSAPVETATKA
                     TISPALVKQLREETGAGMMDCKKALKETEGDLVKAQEYLRKKGLASADKKASRATAEG
                     RIGSYIHDSRIGVLVEVNCETDFVSRGDIFKELVNDLAMQVAACPQVQYLSTEDVPAD
                     IIAKEREIEMQKEDLLSKPEQFRSKIVDGRIKKRLDELALLEQAYIKDDKVVVKDFIK
                     STIATIGENMKVKRFVRFNLGEGLEKRSQDFAAEVAAQTTAKKVSAPTTEPQPAATEN
                     VDTANEAPKAAISAALVKQLREETGAGMMDCKKALSETGGDLVKAQEYLRKKGLSTAD
                     KKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGRSEKFKELVDDLAMQVVACPKVE
                     YVSIEDIPESIVSKERDIEMQREDILSKPEGIRGKIVDGRVAKRLGELALLEQPFLKD
                     DSVLVKDFVKQTVAAIGENIKVRRFIRFTLGESSETKSEETES"
     misc_feature    <591..1103
                     /gene="LOC139839860"
                     /note="Ribosomal protein S1 [Translation, ribosomal
                     structure and biogenesis]; Region: RpsA; COG0539"
                     /db_xref="CDD:440305"
     misc_feature    <1332..1994
                     /gene="LOC139839860"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional; Region: PTZ00341"
                     /db_xref="CDD:173534"
     misc_feature    <1803..2276
                     /gene="LOC139839860"
                     /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
                     /db_xref="CDD:236766"
     misc_feature    2247..2840
                     /gene="LOC139839860"
                     /note="elongation factor Ts; Reviewed; Region: tsf;
                     PRK12332"
                     /db_xref="CDD:183447"
     misc_feature    2973..3563
                     /gene="LOC139839860"
                     /note="elongation factor Ts; Reviewed; Region: tsf;
                     PRK12332"
                     /db_xref="CDD:183447"
     polyA_site      3796
                     /gene="LOC139839860"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataagggttt aaagacccac ccacctttca tttccctctt tttcatactc actccattcg
       61 cggatagcaa atatatcaca cctcaatccg taaaccttca ttcaaaaggg tgaagacgct
      121 gatgaataat tagcctagtt actgatctaa cgaaactgaa ccaaaccgga cctaaccata
      181 ctcgattcat ctttggagtc aagatgacgc ctgttatccc ttcatcaaca agcaatatct
      241 ctcttatacc tgggcccact ttcagtacaa aaaagaccat cagttcgata aaatgctgta
      301 atctaacaag atccaccaga agaacactat acgctcaaga ttgtgtatta ctgttgtcaa
      361 catcccttag attatttccg catatcagaa cgtttggttt acaacacaaa caaagatttg
      421 cagtagcatc ggctaccgag gtcgatgtag ctgtggaaca agctgaccaa tcagatgttc
      481 cggtttctga acaagagtca ggtcaaacat cagaaccaac atcaacggtt gacaagtcaa
      541 aacaaagatc acgacctgtc agaaagagtg aaatgccacc tgtgaaagat gaagaattgg
      601 ttccgggtgc aagtttcaca ggtaaagtaa gatcgatcca accgtttgga gcgtttgttg
      661 actttggtgc atttacagac gggctagttc acgtttcacg gttaagtgag ggttacgtga
      721 aggatgttgc gagtgttgtt tcggtaggac aagaagtgaa ggtgaagtta gtcgaggcaa
      781 atattgaaac gggtcgaatc gcgttgacca tgcgggaaag tgagcccgcg agtggtggtg
      841 atacgtctcg acctcctaga agaacgggtc aaaagtcaaa ccagaggcaa gaggggagaa
      901 aaagtacaaa gtttgtgaag ggtcaagatc ttgagggtac cgtaaagaat cttacaagat
      961 cgggtgcatt tataaatcta cccgatgggg aggaagggtt tttgcccgct tcggaagaag
     1021 ccgacgaagg gttcggaagt ataatgggta cggggtcatc gctcgagatt ggtcaagaag
     1081 tcaaagttcg ggtcttgcgt attgcaaggg gtcaagtaac gttgactatg aagaaagatg
     1141 aagataataa tgctttggac tcgaagcttc aaggaaaagt ttttacagct acaaaccctt
     1201 ttcttgtagc ttttcgtcaa aataaagata tagcttcgtt tttggatgat agagaaaaag
     1261 ccgaggagac aaccgaggct gaagtcaaac ttgaagcatc ggttgacgag actgaagaag
     1321 tcaaacctgt ttctgatgaa gaggtcaaac ctgacattgt gtctaatgaa tcacaagtaa
     1381 ttgtacccgt aactgaagaa aatgtaattg aagcatcggt ttccgatagc atttcaaccg
     1441 aagagaaagt agagataccc gaggaaacaa tttcaagtga acaagtagat gacgatataa
     1501 tcctggaaaa cgtgaatgaa gatgtaaaaa tcgaacccgt ttctggtgaa aatggtagca
     1561 ttacaagtga agaacaagta gagatacctg aggaggcccc tgtactagac gaaaacgtaa
     1621 tcgcagttga tgccgaaatt cccgatgccg taccagttgg tgaactcata gagaatcaac
     1681 ttgaggaacc ggaaacaaaa gtcgaaacgg atgccgaaat tgcggttcca gttgcagaag
     1741 aaaaagttga agcagttgaa gaaaccatca caaaagtaga tgccgaaatt cccgatgccg
     1801 tgccagttgc tgaagtcaaa gatagtcaac ccgaggaacc ggaaacaaaa gccgaagctg
     1861 ataccgaaat tgtggttcct gttgcagaag aaaaagttga agaagttgct gccgctgtgg
     1921 aaaacacgac aaaagaagct gaaattcccg atggcgtaca agttagcgaa gtcatagaga
     1981 gtcaacccga agaaccggaa acaaaagccg aagctgatac cgaaatcgag gttccagttg
     2041 cagaagaaaa agttgaagcc gtttctgccc ctgttgaaac taccacaaaa gatgccgaaa
     2101 ttcccgatgc cataccaatt ggcgaagtca tagagaatca acccgaggaa ccggtaacaa
     2161 aagccgaaac agataccgaa attgtggttc cagttgcaga agaaaaagtt gaagccgttt
     2221 ctgcccctgt ggaaaccgcc acaaaagcaa caatatcacc ggctcttgtg aagcaactac
     2281 gtgaagaaac aggtgcgggt atgatggact gcaagaaagc acttaaagaa accgagggcg
     2341 atttggtcaa agcacaagaa tacctaagaa agaaagggtt agcaagtgct gacaaaaagg
     2401 cgagccgggc cacagccgaa ggtagaatcg ggtcctacat tcacgatagc agaatcgggg
     2461 tccttgtaga agtcaactgc gagaccgatt tcgtatcacg tggcgacatt tttaaagaac
     2521 tagtcaacga tttggcaatg caagttgcag cttgtccaca ggttcagtat ctatccacag
     2581 aagacgttcc tgctgacatc atcgcaaaag aaagagaaat cgagatgcaa aaagaagatc
     2641 ttttgtcaaa acccgagcaa tttaggtcta aaattgttga cgggagaatc aagaagaggc
     2701 ttgatgagct ggcattgctt gaacaggctt acattaagga cgataaggtt gtggtcaaag
     2761 attttataaa gtcaacgatt gcaacaattg gagaaaatat gaaagtcaaa cggtttgtaa
     2821 ggttcaacct tggtgaaggg ttggaaaaga gaagtcaaga ttttgctgct gaagttgctg
     2881 cacaaactac agccaagaag gtgtctgcac caacaaccga gccgcaacct gcagccaccg
     2941 aaaatgttga caccgcaaat gaggcaccga aagcagcaat ttcagccgcg ttggtaaagc
     3001 aactacgtga agaaactggt gcaggtatga tggactgcaa aaaggctctt tctgaaaccg
     3061 ggggagacct tgtgaaggca caagagtatc tacgaaagaa aggtctatca accgctgaca
     3121 aaaaatcaag tcgtttagca gccgaaggta gaatcgggtc ctacattcac gattctcgta
     3181 tcggtgtcct tatcgaagtc aactgtgaaa ccgactttgt gggtagaagt gaaaagttta
     3241 aagaattagt tgacgattta gccatgcaag tcgttgcatg cccaaaagtg gagtacgttt
     3301 cgattgaaga tattcccgag agtattgtga gtaaagagag agatatcgag atgcaacgag
     3361 aagatatttt gtcgaaaccc gagggtataa ggggaaagat tgtggacggg cgggttgcaa
     3421 agaggcttgg ggaacttgcg cttcttgagc aaccgtttct gaaagatgat tcggttcttg
     3481 tgaaagattt tgtgaagcag acagtggcgg ctattggtga gaacattaag gttaggaggt
     3541 tcattcggtt tacactcggt gagtcgagtg agactaaatc tgaagaaacc gagtcttgag
     3601 gttacagagt tggtagtacc aaggtctgtt tgagtttttc aaaaggcagt tgtttctttt
     3661 tgcatttttg acattgttgg attataattt ttagagattt tgtcggtact gtgtaacata
     3721 ctacagtctt taaaacttgt aacactatct taagttacta ttctatattt atttatatat
     3781 aaccattccc gttttc
//
LOCUS       XM_071830058            2687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit STT3A-like (LOC139839861), mRNA.
ACCESSION   XM_071830058
VERSION     XM_071830058.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2687
                     /gene="LOC139839861"
                     /note="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit STT3A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839861"
     CDS             96..2453
                     /gene="LOC139839861"
                     /codon_start=1
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit STT3A-like"
                     /protein_id="XP_071686159.1"
                     /db_xref="GeneID:139839861"
                     /translation="MAVPVDIITKQTTPSSPLRFAFGNVLAFFILLLIGVLAFSIRLF
                     SVIKYESVIHEFDPYFNYRVTQFLIKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTL
                     TAGTIWKVLHSLNIPLSVESVCVFTAPVFSAFAAWATYLLTKEVKGTGAGLTAAVLLA
                     MVPSYISRSVAGSYDNEAVAIFALIFTFYLYIKTLNTGSLFYATLNSISYFYMVCSWG
                     GYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHF
                     ASFLVFIVIHVVALAYYIKGILSPKMFKVAATLVVSVGVVVCCAVVAVLVAVVASSPT
                     KGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLVPAGIIACFAP
                     LSDASSFVILYLVMSVYFSGVMVRLMLVLAPAACIMSGIALSEAFDVFTRSIKFHISR
                     LSDTLQTDVVDIIPGNGATPQIDVLKADKKEDLLKERPSRKSKKKEKENVEKPSIKSK
                     KTEKTPLVLPIEASFFALFLTVLLGGFYVVHSVWAAAEAYSAPSIVLTSHSHDGLHVF
                     DDFREAYAWLSHNTEVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMS
                     SPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRD
                     GQYRIDSEATPTMLNSLMYKLSYFRFVETDGGKGYDRVRRTEIGKKHFKLTHFEEVFT
                     THHWMVRIYKLKPQKNRIRVKPKKSKSKTSSATPRTGSMKKNPWH"
     misc_feature    168..1412
                     /gene="LOC139839861"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; Region: PMT_2; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 ttactgtttg tgtagccaaa gtcttctctt tgttagctcg atattgactc caaatcaaat
       61 catacacgca ttacagtgta ttccgaccgc cgttaatggc agtccccgtc gatatcatca
      121 ccaagcaaac aacgccgtct tcgccgctac gtttcgcctt cggaaatgtt ctagcgttct
      181 ttattctgtt gttaatcgga gtactcgcat tctcgatccg tttattttcg gttatcaagt
      241 atgaaagcgt tattcatgaa tttgatccct atttcaatta cagagtcacc cagttcctaa
      301 taaagaatgg gatatatgac ttctggaatt ggtttgatga ccgaacctgg tatcctcttg
      361 gacgtgtcat tggtggaacc gtttacccag gattgacttt gactgctgga actatatgga
      421 aggttcttca ttccttgaat attcctctgt ctgtggaaag tgtatgtgta tttactgctc
      481 ccgtgttctc tgcctttgct gcgtgggcaa catatttgtt gactaaggaa gttaagggaa
      541 caggtgctgg actgactgct gcggttcttc tagccatggt gccgtcctat atatctcgat
      601 cggtagctgg gagttatgac aatgaagctg tggcaatttt cgctttgatc ttcacctttt
      661 atctctacat caagactttg aacaccggat ccctcttcta cgctacacta aattccattt
      721 catactttta catggtctgc tcttggggag ggtatacctt tatcatcaat ctcataccga
      781 tgcatgtgct tctttgcata gtgactggtc gctattcgtc tcgcctgtac attgcatatg
      841 ctccacttgt tgtcctgggg acgttattgg cagcattggt gcctgttgtt ggttttaatg
      901 cggtcatgac atcagaacat tttgcatcat tcctggtttt catcgttatt catgtagtgg
      961 ctcttgcata ttatatcaaa ggaattcttt caccaaagat gtttaaagta gctgctaccc
     1021 tcgtagtatc tgttggcgtg gtggtatgct gcgctgtagt agcagtactt gttgcagttg
     1081 ttgcatctag tcctacaaag ggatggagtg gacgaagttt aagtcttctt gatccaactt
     1141 atgcaagcaa gtacataccg atcattgcaa gtgtcagtga acatcaacct cctacatggc
     1201 cgtcttactt tatggatatt aacgttttag cgtttttagt ccctgctgga attattgcat
     1261 gctttgcccc actatctgat gcaagctcct ttgtaatcct atacctagta atgtcggtat
     1321 atttctctgg tgtcatggta cggctaatgc ttgtgcttgc tccagctgca tgtataatgt
     1381 ctggaattgc tctttctgaa gcttttgatg ttttcactag atccattaag ttccatatat
     1441 ctcgtctatc tgatactctc cagactgatg ttgtggatat tatacctggt aatggtgcta
     1501 ccccacaaat tgatgtattg aaagctgaca aaaaagaaga tttgttaaag gaacgacctt
     1561 caagaaaatc taagaaaaaa gagaaggaga acgttgaaaa gccttctatc aagtctaaga
     1621 agactgaaaa gacgcctcta gtcttgccta tcgaggcatc tttttttgct cttttcctaa
     1681 ctgtgttgct aggtggtttc tacgttgtcc atagcgtttg ggctgctgca gaagcatatt
     1741 cagctccttc gatcgtgctt acatctcatt cacacgatgg ccttcatgtt ttcgacgatt
     1801 tcagagaagc ctatgcatgg ttgagccata acactgaagt agatgacaag gttgcatcat
     1861 ggtgggacta tggttaccaa acaactgcaa tggctaaccg cacagttatt gttgacaata
     1921 acacatggaa caacactcat attgctactg ttggtactgc aatgtcatct cccgaaaagg
     1981 ctgcttggga aattttcaac tccttggatg taaaatatgt ccttgttgtc tttggaggtc
     2041 ttgtgggtta ccctagtgat gacataaata aatttctttg gatggttcgt attggaggtg
     2101 gtgtgttccc acatatcaag gaacctgact atttgagaga tggtcagtac agaattgact
     2161 ctgaagccac tccaaccatg ctcaacagtc tcatgtacaa attatcctac ttcaggtttg
     2221 tggaaactga tggtggtaaa ggatatgata gagtaagaag gaccgaaatt ggaaagaagc
     2281 actttaaatt aactcatttt gaggaggtat ttacaacaca ccattggatg gttcggattt
     2341 ataaattaaa acctcaaaag aacaggatcc gagtgaagcc aaagaagtct aaatcgaaaa
     2401 ctagctcggc gacgcctagg actggatcaa tgaagaaaaa tccatggcac taaaagttag
     2461 tttcagtgtt tacgtgatga tattagatgt gatacagctt ttatttatag aaacggctgt
     2521 gaccgaccaa agattttgta gcgaattatg atggtttgag ggcatttcta actacagtaa
     2581 acgaaatgat tagatcaaca tttcctatat ctttaacttg ttaccagagg taagattatg
     2641 aatacatgtt acttgacgta tgggcattaa aagttacatt acaatca
//
LOCUS       XM_071830059            1839 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SNW/SKI-interacting protein
            A-like (LOC139839862), mRNA.
ACCESSION   XM_071830059
VERSION     XM_071830059.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1839
                     /gene="LOC139839862"
                     /note="SNW/SKI-interacting protein A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139839862"
     CDS             128..1663
                     /gene="LOC139839862"
                     /codon_start=1
                     /product="SNW/SKI-interacting protein A-like"
                     /protein_id="XP_071686160.1"
                     /db_xref="GeneID:139839862"
                     /translation="MAVLKDYGDGGAFPEIHYAQYPLDMGRNIDSSSRLKTLHVTVDN
                     HGNLMFDTIVKQDENAKQIVYSQHGDIVPKILKDEEEEDDDEDNDEKQKKIEETTLQT
                     KAALEKIVNVKLSAAHSKNVQTQSQDSKFIKYKPSQQSAAFNSGARERIIRMVEMHVD
                     PLEPPKFKHKRFPKANGSPPVPVMQSPPRPITVQDQQDWQIPPCTSNWKNLKGYTIPL
                     DKRLAADGRGLEDVQINDNFAKFSEALYVGEQRAREAVAMRSKVQKEMILKDKERKEQ
                     ELRALAQKARSERTVTGTTVGTGSFVPSEKNIMDEDELVEHEHRRMKDRDGPRESKEE
                     EREERIQRDKIREERHRERVRERRLEAKDAAIGKKSKITRDRDRDIGEKVALGMASGG
                     SRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLYTAQRTLSTLYRPKKDADDEMY
                     GGAEEHLEKIRKTERFKPDKGVFGAGEKGGPRGGPVEFEKEEETDLFGLDEFLKRLKE
                     ERN"
     misc_feature    524..991
                     /gene="LOC139839862"
                     /note="SKIP/SNW domain; Region: SKIP_SNW; pfam02731"
                     /db_xref="CDD:460666"
     polyA_site      1839
                     /gene="LOC139839862"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcaattccc aaattttcat cccaccaggg tgagacgtaa ttcgccttaa tcgggcatca
       61 ttcttgatcg cagataattc gtaaatctca ttgatccaga cattataaat ttacggtctt
      121 tgtcaccatg gctgttttga aggactatgg tgatggtgga gcgttccccg agattcatta
      181 cgcacaatat cctcttgata tgggtaggaa tattgattcg tcttcccgcc taaagacgtt
      241 gcatgtcaca gttgataatc atggtaattt aatgtttgat actattgtga agcaggacga
      301 aaatgctaag cagattgttt attcacagca cggcgatatt gtcccgaaga ttttgaaaga
      361 tgaagaagaa gaagacgacg atgaggataa tgatgagaag caaaagaaga ttgaagagac
      421 aacactgcag acaaaagccg ctcttgagaa gattgtgaat gttaaattga gtgcagcaca
      481 ctcaaaaaat gtgcagactc agtctcaaga ttcaaagttc atcaagtaca agccgtctca
      541 gcagtcagct gcatttaact cgggtgcaag ggagagaatt attagaatgg ttgagatgca
      601 tgtggaccct ttagagccgc caaagtttaa acacaaacga ttcccgaaag ctaatggttc
      661 accccctgtt ccagtcatgc agtcccctcc ccgtccaatt actgtacagg accaacaaga
      721 ttggcagatt cctccatgta cctctaactg gaagaatctt aaagggtaca caatcccact
      781 tgataaacgt ttggcagccg atggtagagg tcttgaggat gtccaaatta acgataattt
      841 tgcaaagttt tctgaagcat tatatgtagg agaacagaga gctcgagaag ctgttgccat
      901 gaggtccaaa gttcaaaaag aaatgatatt gaaagacaaa gaaagaaaag agcaagaatt
      961 acgagcactg gctcaaaaag ctagatctga aagaactgtt accgggacta ctgttggtac
     1021 tggttctttt gtaccctctg aaaagaatat aatggatgag gatgagcttg ttgaacacga
     1081 acatagacgt atgaaggacc gtgatggacc tagagaatca aaagaggagg agagagaaga
     1141 gagaattcaa agagacaaga ttcgtgaaga gaggcataga gagagagtaa gagaaagaag
     1201 attggaggct aaagatgcag ccatagggaa gaagagtaag atcactagag accgagaccg
     1261 tgacattggt gaaaaagttg cactcggtat ggcatctggt ggatcacgag ggggtgaagt
     1321 catgtacgat cagcgtctgt tcaatcaaga aaaagggatg gattctggtt ttgcaactga
     1381 tgatcagtat aatgtatatg ataaaggttt gtatactgca caacggacac tatccacgtt
     1441 atataggccg aagaaagatg cagatgatga gatgtatggt ggggccgaag agcatcttga
     1501 gaagattagg aagactgagc ggtttaaacc tgacaagggt gtctttggtg ccggtgaaaa
     1561 gggtggacca agaggcgggc cagtcgagtt tgagaaggaa gaagaaactg atttatttgg
     1621 tttggacgag tttttgaaaa ggttaaagga ggaaagaaac tagctggata aagttggaag
     1681 tggaggaaca atgagaggaa ctggtggctc gtttagttta ggtcatatta aatgcatttt
     1741 atttgtgaca ttttttttct ttatctacat ctgcattcta aatatatttt tattagaata
     1801 ttgtcaaaaa cgcacattaa gattactcat tgaccatta
//
LOCUS       XM_071830060            1736 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CDPK-related kinase 4-like
            (LOC139839863), mRNA.
ACCESSION   XM_071830060
VERSION     XM_071830060.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1736
                     /gene="LOC139839863"
                     /note="CDPK-related kinase 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139839863"
     CDS             94..1635
                     /gene="LOC139839863"
                     /codon_start=1
                     /product="CDPK-related kinase 4-like"
                     /protein_id="XP_071686161.1"
                     /db_xref="GeneID:139839863"
                     /translation="MFKWPFPPPSPAKPIMSAILKRHGGGKGNTAATGTAIPEDDVSA
                     ERSLDKSFGYGRNFESKYELGKEIGKGHFGHTCMAKCKKGVFKNQPVAVKIISKAKMT
                     TAISIEDVRREVKLLKGLSGHQHMVQFHEAFEDDQNVYIVMELCEGGELLDRILSRGG
                     RYIENDAKSIVVQILSVASFCHLQGVVHRDLKPENFLFSTKDEESQLKVIDFGLSDFA
                     RPDQRLNDIVGSAYYVAPEVLHRSYNVEADIWSIGVITYILLCGSRPFFARSESGIFR
                     SVLRADPNLSDSPWPSVTPEAKDFVKRLLNKDHRKRMTASQALTHPWLRDENRAVPLD
                     ILIYKLVKSYLRASPLKRATLKALSKALTEDEIVYLRAQFNLLEPKDGYVSLDNFRTA
                     LVKHSTAAMKESRVLDILDTMKPLTYIRMEFEEFCAAAISPLQLEALETWETIASSAF
                     EYFELEGNRVISVDALAQEMNVGPTAHSILKDWIRSRDGKLNFFGYAKLLHGLTIRSA
                     NTRHH"
     misc_feature    274..1062
                     /gene="LOC139839863"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; Region: STKc_CAMK; cd05117"
                     /db_xref="CDD:270687"
     misc_feature    order(295..309,334..336,367..369,373..375,472..474,
                     520..531,541..543,547..549,658..663,667..669,673..678,
                     682..684,721..726,733..735,775..789,793..795)
                     /gene="LOC139839863"
                     /note="active site"
                     /db_xref="CDD:270687"
     misc_feature    order(295..306,334..336,367..369,373..375,472..474,
                     520..531,541..543,673..678,682..684,721..726)
                     /gene="LOC139839863"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(307..309,541..543,547..549,658..663,667..669,
                     673..675,733..735,775..789,793..795)
                     /gene="LOC139839863"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(721..747,775..789)
                     /gene="LOC139839863"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270687"
ORIGIN      
        1 accccgaatc attccttcac cggaagccca tggggacaaa cgtatcctgc cggagtaccg
       61 ccaacgccgt cgccggcgag gactccgaga cggatgttca aatggccgtt tccgccaccc
      121 tctccagcga agccgatcat gtcagcaatt ttaaaacggc acggtggcgg gaagggaaat
      181 acggctgcga ccggcactgc gataccggaa gatgacgtca gcgcagagag atcgttggat
      241 aaaagttttg ggtatggacg gaattttgag tcaaagtatg agttggggaa agaaattgga
      301 aaagggcatt ttggtcatac ttgtatggct aaatgtaaaa aaggtgtttt taagaatcaa
      361 cctgttgctg taaaaatcat ttctaaagct aagatgacaa cagcaatatc gattgaggat
      421 gtacgtaggg aggttaaatt attgaagggt ttatcaggac atcaacatat ggttcagttt
      481 catgaggcat ttgaggatga tcagaatgtg tatatagtta tggaattgtg tgaaggtggg
      541 gaacttcttg atcgcatttt atcgagaggt gggcgatata tagaaaatga tgcaaaatcg
      601 atagttgttc aaattttgag tgtagcttcc ttttgtcatc ttcagggtgt tgtgcaccgt
      661 gatttgaagc cagagaactt ccttttcagc acaaaagatg aagaatctca attaaaagtt
      721 atagattttg gtttatccga ctttgccaga ccagatcaac gactcaatga tattgtcggc
      781 agtgcatact atgttgcacc agaagtactt cacagatcat acaatgttga ggcggacatt
      841 tggagtatcg gcgttataac gtacatatta ttatgtggaa gtcgtccctt ttttgctcgg
      901 agcgaatccg gaatattccg ttctgttctg agggccgatc ctaatcttag tgactcacct
      961 tggccttcag taactccaga agccaaagat tttgttaaac gacttctcaa caaggatcat
     1021 cggaaacgaa tgaccgcatc tcaagccttg actcaccctt ggttaagaga tgaaaaccgt
     1081 gcggtcccat tggacatttt gatctacaag ttagtcaagt catatcttcg agcctcacct
     1141 ttaaagcgcg caacattgaa ggctctctca aaagctttga ctgaggatga aatcgtttac
     1201 ttaagggctc agtttaatct cttggaacct aaagatggat atgtttccct agacaatttt
     1261 agaacggctc ttgtgaaaca ttccactgct gccatgaaag aatcaagggt ccttgacatt
     1321 ttggacacga tgaagcctct tacttatatt cggatggaat ttgaagagtt ttgtgctgct
     1381 gcaattagcc cgcttcaact tgaggccctt gaaacgtggg aaaccattgc cagctcagct
     1441 tttgaatatt ttgaactaga aggaaaccga gtcatttctg tagatgcatt agcacaggaa
     1501 atgaatgtgg ggccaacagc gcactcgata ttgaaggatt ggataagaag tagagatgga
     1561 aaactcaatt tttttggata tgctaagctt ttacatggtt taactattcg cagcgccaac
     1621 acaaggcatc attaggtaaa ctgagattaa ttgaataggt gattcttgtt tgtttattct
     1681 taaaattatt attatttttt ttccctgatg cttaaacaaa aaaagataag gcgata
//
LOCUS       XM_071830061            3200 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SNW/SKI-interacting protein
            A-like (LOC139839864), transcript variant X1, mRNA.
ACCESSION   XM_071830061
VERSION     XM_071830061.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3200
                     /gene="LOC139839864"
                     /note="SNW/SKI-interacting protein A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139839864"
     CDS             23..1837
                     /gene="LOC139839864"
                     /codon_start=1
                     /product="SNW/SKI-interacting protein A-like"
                     /protein_id="XP_071686162.1"
                     /db_xref="GeneID:139839864"
                     /translation="MAALKEILPPAKSSAATFYDHSSDPWFKQRYSAPTEEERAEIIK
                     TNTIPLYNTAERLKYRPSKAHDYGDGGAFPEIHYAQYPLDMGRKKDSSSGPKTLPVTV
                     DNRGNLTFDAIVKQNENAKKIVYSQHRDIVPKILKDEEEEDDEDDDEKQKEIEETTLQ
                     TKAALEKIVNVRLSAAQPKNVQTQSQDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPV
                     DPLEPPKFKHKRVPKANGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIP
                     LDKRLAADGRGLQEVQINDNFAKLSEALYVAEQRAREAVAMRSKVQKEMMLKDKERKE
                     QELRALAQKARSERTGTGTTVGAGSFVPSEKNMMDVDEPVEHEYRRVKDRDGPRESKE
                     EREERIQREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASGG
                     SRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDEMY
                     GGADEQLEKIRKTERFKPDKGFSGAGEKSGPRDGPVEFEMEKDPFGLDQFLDNVKGGK
                     KPLDKVGSGGTMRASGGSSTREGYEGSGRSRIGFQKGR"
     misc_feature    596..1063
                     /gene="LOC139839864"
                     /note="SKIP/SNW domain; Region: SKIP_SNW; pfam02731"
                     /db_xref="CDD:460666"
ORIGIN      
        1 tttgtttcag gtttttgtca ccatggctgc tctgaaggag attttaccac ctgcaaaatc
       61 atctgctgct accttctatg atcactcgag cgatccatgg ttcaagcaaa gatacagtgc
      121 tccgacagag gaggagcgag ctgagattat taaaactaat accattccat tgtataatac
      181 agcagaacgt ttgaagtatc ggccatcaaa ggcacatgac tatggtgatg ggggagcatt
      241 tcccgagatt cattatgcgc aatatcctct tgatatgggt aggaagaaag attcatcttc
      301 tggtccaaag acgttgcctg tcacagttga taaccgtggg aacttaacat ttgatgctat
      361 tgtgaagcag aatgaaaatg ctaagaagat tgtttattca cagcacagag atatcgtccc
      421 aaagattttg aaagatgagg aagaagaaga tgacgaggat gatgatgaga agcagaaaga
      481 gattgaagag acaacacttc agacaaaagc agctcttgag aagattgtga atgttagatt
      541 aagtgcagct cagccaaaaa atgtccagac tcagtctcaa gattcaaagt tcatcaagta
      601 caagccttct cagcagtcag ctgcatttaa ctcgggtgca aaggagagaa ttattagaat
      661 ggttgagatg cctgtggacc ctttagagcc gccaaagttt aaacacaaac gagtcccaaa
      721 agctaatggt tcaccgccgg ttccggtcat gcactcccct ccccgtcctg ttactgtaaa
      781 agaccaacaa gattggaaga ttcctccgtg tatttctaac tggaagaatc ctaaagggta
      841 cacaatccca cttgataaac gtttggcagc cgatggtaga ggacttcaag aagtccaaat
      901 taacgataat ttcgcaaagc tttctgaagc gttatatgta gcagaacaga gagctcgaga
      961 agctgttgcc atgaggtcca aagttcaaaa agaaatgatg ttgaaagaca aagaaagaaa
     1021 agaacaagaa ttacgagcat tggctcagaa agcaagatct gaaagaactg gcaccgggac
     1081 tactgttggt gctggttcat ttgtaccctc tgaaaagaat atgatggatg tggatgagcc
     1141 tgttgaacat gaatatagac gtgtgaagga ccgggatgga cctagagaat caaaagagga
     1201 gagagaagag agaattcaaa gagaaaagat tcgtgaagag agacgtagag agagagaaag
     1261 agagagaaga ttggaggcta aagatgcagc gatggggaag aagagtaaaa tcacgagaga
     1321 ccgagaccgg gacattagtg aaaaggttgc actcggaatg gcatcaggtg gatcacgagg
     1381 gggtgaagta atgtacgatc agcgtttgtt taatcaagaa aaggggatgg attctggttt
     1441 tgcaactgat gatcaataca atgtgtatga taaaggcttg ttcactgcac aaccgacttt
     1501 atccacgtta tataggccaa agaaagatgc agatgatgag atgtatggtg gggccgatga
     1561 gcagctcgag aagatcagga agactgagcg gtttaaaccc gataagggtt tctctggtgc
     1621 tggtgaaaag agtggaccaa gagatggtcc agtcgagttt gagatggaaa aagatccatt
     1681 tggtctggac caatttttgg acaatgttaa aggagggaag aaaccgttgg ataaagttgg
     1741 aagtggagga acaatgagag caagtggtgg gtcgtctacc cgagaagggt atgaaggttc
     1801 tggtaggtct cgtatcgggt tccaaaaggg gcgctaaatt tataatacaa ttgtcgatgg
     1861 gcccattaga tactgtgggt atttattgtt gttctactca actgtggtta ttagtttgtg
     1921 ttatttgtac ttggggcgta ctttggttgt agtaatggat tcaagaatca agctagtcac
     1981 attgttatat ggttactctt tgtctgtttt tctatatctc ctgaatatgt taacttttgt
     2041 cggttttttt gttgatagga acaagtgaat aacatagctt gtctgttgac tgaactgttc
     2101 ctttcctggt ttgtttctct cttctattta ttacattgga tggattgctt tggggaagca
     2161 agtgcatctc agctaattta cttatcttta gaatattgca gatacattgg atcatatcaa
     2221 tatgttttct aaccacttca tcttgattat gggttaaaat ataagactct accttataac
     2281 tttcgttaca cttggtcatt aattgtagtt atattaatgc gcaaatgtta ttgcttgact
     2341 aaaggttctt gtgttgtatg agcttatcag tcttttcctt gtgttcaatc gaagacgact
     2401 atggatcact tgcatcaggg ttgatgtcag aattggctct acttgttgtg cagagacgac
     2461 tacgcagggt tggaccgttg cagctaaagt attctgaaat ctgacgtcac gtcttcaatc
     2521 tttataagca tctcttgtta tattccttgt accccagttt ttgaaatctt ctttttaggt
     2581 gtactgttct ttttatgatt gacctggtgg tgtgcctgca taaagtaaca gaaaaaatca
     2641 tcatatagtt tatggacttc aaagttggta aagtgttcct cgtctgctac atctgtactt
     2701 acaagtcgtt gatgggtgtt cccttcatca cattatgtat tatctacttg tttggctcaa
     2761 gacaatgttt ctaaggggca gtgtcgcgct gatcattttc tcgaagagtg ctgaataatc
     2821 tactggaata actaagcttg tgtttggagc gaaatatcac attccgggtt ttgtttttca
     2881 ttctgtttta gcgtgggatt gaagacagaa gatacattga attctactgg ttagataaca
     2941 taattccaga aaatcgttga tatttgatga ttgattggat agttaatagt accgttggct
     3001 acaccatctt catgactagt cttaaccgtt cagcgttggg gtcaataaaa tgataatagc
     3061 tatgtcacat gagaagggtg atgtcgggcc tagttcactc gaaaaagtac cttcacctga
     3121 aaaagatgcc ttgtacgcca gtaagggaga aaagtgggga taattacaca gtttcaaata
     3181 tggaatcacc tatttgtccg
//
LOCUS       XM_071830062            3107 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SNW/SKI-interacting protein
            A-like (LOC139839864), transcript variant X2, mRNA.
ACCESSION   XM_071830062
VERSION     XM_071830062.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3107
                     /gene="LOC139839864"
                     /note="SNW/SKI-interacting protein A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139839864"
     CDS             23..1837
                     /gene="LOC139839864"
                     /codon_start=1
                     /product="SNW/SKI-interacting protein A-like"
                     /protein_id="XP_071686163.1"
                     /db_xref="GeneID:139839864"
                     /translation="MAALKEILPPAKSSAATFYDHSSDPWFKQRYSAPTEEERAEIIK
                     TNTIPLYNTAERLKYRPSKAHDYGDGGAFPEIHYAQYPLDMGRKKDSSSGPKTLPVTV
                     DNRGNLTFDAIVKQNENAKKIVYSQHRDIVPKILKDEEEEDDEDDDEKQKEIEETTLQ
                     TKAALEKIVNVRLSAAQPKNVQTQSQDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPV
                     DPLEPPKFKHKRVPKANGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIP
                     LDKRLAADGRGLQEVQINDNFAKLSEALYVAEQRAREAVAMRSKVQKEMMLKDKERKE
                     QELRALAQKARSERTGTGTTVGAGSFVPSEKNMMDVDEPVEHEYRRVKDRDGPRESKE
                     EREERIQREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASGG
                     SRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDEMY
                     GGADEQLEKIRKTERFKPDKGFSGAGEKSGPRDGPVEFEMEKDPFGLDQFLDNVKGGK
                     KPLDKVGSGGTMRASGGSSTREGYEGSGRSRIGFQKGR"
     misc_feature    596..1063
                     /gene="LOC139839864"
                     /note="SKIP/SNW domain; Region: SKIP_SNW; pfam02731"
                     /db_xref="CDD:460666"
ORIGIN      
        1 tttgtttcag gtttttgtca ccatggctgc tctgaaggag attttaccac ctgcaaaatc
       61 atctgctgct accttctatg atcactcgag cgatccatgg ttcaagcaaa gatacagtgc
      121 tccgacagag gaggagcgag ctgagattat taaaactaat accattccat tgtataatac
      181 agcagaacgt ttgaagtatc ggccatcaaa ggcacatgac tatggtgatg ggggagcatt
      241 tcccgagatt cattatgcgc aatatcctct tgatatgggt aggaagaaag attcatcttc
      301 tggtccaaag acgttgcctg tcacagttga taaccgtggg aacttaacat ttgatgctat
      361 tgtgaagcag aatgaaaatg ctaagaagat tgtttattca cagcacagag atatcgtccc
      421 aaagattttg aaagatgagg aagaagaaga tgacgaggat gatgatgaga agcagaaaga
      481 gattgaagag acaacacttc agacaaaagc agctcttgag aagattgtga atgttagatt
      541 aagtgcagct cagccaaaaa atgtccagac tcagtctcaa gattcaaagt tcatcaagta
      601 caagccttct cagcagtcag ctgcatttaa ctcgggtgca aaggagagaa ttattagaat
      661 ggttgagatg cctgtggacc ctttagagcc gccaaagttt aaacacaaac gagtcccaaa
      721 agctaatggt tcaccgccgg ttccggtcat gcactcccct ccccgtcctg ttactgtaaa
      781 agaccaacaa gattggaaga ttcctccgtg tatttctaac tggaagaatc ctaaagggta
      841 cacaatccca cttgataaac gtttggcagc cgatggtaga ggacttcaag aagtccaaat
      901 taacgataat ttcgcaaagc tttctgaagc gttatatgta gcagaacaga gagctcgaga
      961 agctgttgcc atgaggtcca aagttcaaaa agaaatgatg ttgaaagaca aagaaagaaa
     1021 agaacaagaa ttacgagcat tggctcagaa agcaagatct gaaagaactg gcaccgggac
     1081 tactgttggt gctggttcat ttgtaccctc tgaaaagaat atgatggatg tggatgagcc
     1141 tgttgaacat gaatatagac gtgtgaagga ccgggatgga cctagagaat caaaagagga
     1201 gagagaagag agaattcaaa gagaaaagat tcgtgaagag agacgtagag agagagaaag
     1261 agagagaaga ttggaggcta aagatgcagc gatggggaag aagagtaaaa tcacgagaga
     1321 ccgagaccgg gacattagtg aaaaggttgc actcggaatg gcatcaggtg gatcacgagg
     1381 gggtgaagta atgtacgatc agcgtttgtt taatcaagaa aaggggatgg attctggttt
     1441 tgcaactgat gatcaataca atgtgtatga taaaggcttg ttcactgcac aaccgacttt
     1501 atccacgtta tataggccaa agaaagatgc agatgatgag atgtatggtg gggccgatga
     1561 gcagctcgag aagatcagga agactgagcg gtttaaaccc gataagggtt tctctggtgc
     1621 tggtgaaaag agtggaccaa gagatggtcc agtcgagttt gagatggaaa aagatccatt
     1681 tggtctggac caatttttgg acaatgttaa aggagggaag aaaccgttgg ataaagttgg
     1741 aagtggagga acaatgagag caagtggtgg gtcgtctacc cgagaagggt atgaaggttc
     1801 tggtaggtct cgtatcgggt tccaaaaggg gcgctaaatt tataatacaa ttgtcgatgg
     1861 gcccattaga tactgtgggt atttattgtt gttctactca actgtggtta ttagtttgtg
     1921 ttatttgtac ttggggcgta ctttggttgt agtaatggat tcaagaatca agctagtcac
     1981 attgttatat ggttactctt tgtctgtttt tctatatctc ctgaatatgt taacttttgt
     2041 cggttttttt gttgatagga acaagtgaat aacatagctt gtctgttgac tgaactgttc
     2101 ctttcctgat acattggatc atatcaatat gttttctaac cacttcatct tgattatggg
     2161 ttaaaatata agactctacc ttataacttt cgttacactt ggtcattaat tgtagttata
     2221 ttaatgcgca aatgttattg cttgactaaa ggttcttgtg ttgtatgagc ttatcagtct
     2281 tttccttgtg ttcaatcgaa gacgactatg gatcacttgc atcagggttg atgtcagaat
     2341 tggctctact tgttgtgcag agacgactac gcagggttgg accgttgcag ctaaagtatt
     2401 ctgaaatctg acgtcacgtc ttcaatcttt ataagcatct cttgttatat tccttgtacc
     2461 ccagtttttg aaatcttctt tttaggtgta ctgttctttt tatgattgac ctggtggtgt
     2521 gcctgcataa agtaacagaa aaaatcatca tatagtttat ggacttcaaa gttggtaaag
     2581 tgttcctcgt ctgctacatc tgtacttaca agtcgttgat gggtgttccc ttcatcacat
     2641 tatgtattat ctacttgttt ggctcaagac aatgtttcta aggggcagtg tcgcgctgat
     2701 cattttctcg aagagtgctg aataatctac tggaataact aagcttgtgt ttggagcgaa
     2761 atatcacatt ccgggttttg tttttcattc tgttttagcg tgggattgaa gacagaagat
     2821 acattgaatt ctactggtta gataacataa ttccagaaaa tcgttgatat ttgatgattg
     2881 attggatagt taatagtacc gttggctaca ccatcttcat gactagtctt aaccgttcag
     2941 cgttggggtc aataaaatga taatagctat gtcacatgag aagggtgatg tcgggcctag
     3001 ttcactcgaa aaagtacctt cacctgaaaa agatgccttg tacgccagta agggagaaaa
     3061 gtggggataa ttacacagtt tcaaatatgg aatcacctat ttgtccg
//
LOCUS       XM_071830063            3098 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SNW/SKI-interacting protein
            A-like (LOC139839864), transcript variant X3, mRNA.
ACCESSION   XM_071830063
VERSION     XM_071830063.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3098
                     /gene="LOC139839864"
                     /note="SNW/SKI-interacting protein A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139839864"
     CDS             23..1837
                     /gene="LOC139839864"
                     /codon_start=1
                     /product="SNW/SKI-interacting protein A-like"
                     /protein_id="XP_071686164.1"
                     /db_xref="GeneID:139839864"
                     /translation="MAALKEILPPAKSSAATFYDHSSDPWFKQRYSAPTEEERAEIIK
                     TNTIPLYNTAERLKYRPSKAHDYGDGGAFPEIHYAQYPLDMGRKKDSSSGPKTLPVTV
                     DNRGNLTFDAIVKQNENAKKIVYSQHRDIVPKILKDEEEEDDEDDDEKQKEIEETTLQ
                     TKAALEKIVNVRLSAAQPKNVQTQSQDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPV
                     DPLEPPKFKHKRVPKANGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIP
                     LDKRLAADGRGLQEVQINDNFAKLSEALYVAEQRAREAVAMRSKVQKEMMLKDKERKE
                     QELRALAQKARSERTGTGTTVGAGSFVPSEKNMMDVDEPVEHEYRRVKDRDGPRESKE
                     EREERIQREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASGG
                     SRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDEMY
                     GGADEQLEKIRKTERFKPDKGFSGAGEKSGPRDGPVEFEMEKDPFGLDQFLDNVKGGK
                     KPLDKVGSGGTMRASGGSSTREGYEGSGRSRIGFQKGR"
     misc_feature    596..1063
                     /gene="LOC139839864"
                     /note="SKIP/SNW domain; Region: SKIP_SNW; pfam02731"
                     /db_xref="CDD:460666"
ORIGIN      
        1 tttgtttcag gtttttgtca ccatggctgc tctgaaggag attttaccac ctgcaaaatc
       61 atctgctgct accttctatg atcactcgag cgatccatgg ttcaagcaaa gatacagtgc
      121 tccgacagag gaggagcgag ctgagattat taaaactaat accattccat tgtataatac
      181 agcagaacgt ttgaagtatc ggccatcaaa ggcacatgac tatggtgatg ggggagcatt
      241 tcccgagatt cattatgcgc aatatcctct tgatatgggt aggaagaaag attcatcttc
      301 tggtccaaag acgttgcctg tcacagttga taaccgtggg aacttaacat ttgatgctat
      361 tgtgaagcag aatgaaaatg ctaagaagat tgtttattca cagcacagag atatcgtccc
      421 aaagattttg aaagatgagg aagaagaaga tgacgaggat gatgatgaga agcagaaaga
      481 gattgaagag acaacacttc agacaaaagc agctcttgag aagattgtga atgttagatt
      541 aagtgcagct cagccaaaaa atgtccagac tcagtctcaa gattcaaagt tcatcaagta
      601 caagccttct cagcagtcag ctgcatttaa ctcgggtgca aaggagagaa ttattagaat
      661 ggttgagatg cctgtggacc ctttagagcc gccaaagttt aaacacaaac gagtcccaaa
      721 agctaatggt tcaccgccgg ttccggtcat gcactcccct ccccgtcctg ttactgtaaa
      781 agaccaacaa gattggaaga ttcctccgtg tatttctaac tggaagaatc ctaaagggta
      841 cacaatccca cttgataaac gtttggcagc cgatggtaga ggacttcaag aagtccaaat
      901 taacgataat ttcgcaaagc tttctgaagc gttatatgta gcagaacaga gagctcgaga
      961 agctgttgcc atgaggtcca aagttcaaaa agaaatgatg ttgaaagaca aagaaagaaa
     1021 agaacaagaa ttacgagcat tggctcagaa agcaagatct gaaagaactg gcaccgggac
     1081 tactgttggt gctggttcat ttgtaccctc tgaaaagaat atgatggatg tggatgagcc
     1141 tgttgaacat gaatatagac gtgtgaagga ccgggatgga cctagagaat caaaagagga
     1201 gagagaagag agaattcaaa gagaaaagat tcgtgaagag agacgtagag agagagaaag
     1261 agagagaaga ttggaggcta aagatgcagc gatggggaag aagagtaaaa tcacgagaga
     1321 ccgagaccgg gacattagtg aaaaggttgc actcggaatg gcatcaggtg gatcacgagg
     1381 gggtgaagta atgtacgatc agcgtttgtt taatcaagaa aaggggatgg attctggttt
     1441 tgcaactgat gatcaataca atgtgtatga taaaggcttg ttcactgcac aaccgacttt
     1501 atccacgtta tataggccaa agaaagatgc agatgatgag atgtatggtg gggccgatga
     1561 gcagctcgag aagatcagga agactgagcg gtttaaaccc gataagggtt tctctggtgc
     1621 tggtgaaaag agtggaccaa gagatggtcc agtcgagttt gagatggaaa aagatccatt
     1681 tggtctggac caatttttgg acaatgttaa aggagggaag aaaccgttgg ataaagttgg
     1741 aagtggagga acaatgagag caagtggtgg gtcgtctacc cgagaagggt atgaaggttc
     1801 tggtaggtct cgtatcgggt tccaaaaggg gcgctaaatt tataatacaa ttgtcgatgg
     1861 gcccattaga tactgtgggt atttattgtt gttctactca actgtggtta ttagtttgtg
     1921 ttatttgtac ttggggcgta ctttggttgt agtaatggat tcaagaatca agctagtcac
     1981 attgttatat ggttactctt tgtctgtttt tctatatctc ctgaatatgt taacttttgt
     2041 cggttttttt gttgatagga acaagtgaat aacatagctt gtctgttgac tgaactgttc
     2101 ctttcctggt ttgtttctct cttctattta ttacattgga tggattgctt tggggaagca
     2161 agtgcatctc agctaattta cttatcttta gaatattgca gatacattgg atcatatcaa
     2221 tatgttttct aaccacttca tcttgattat gggttaaaat ataagactct accttataac
     2281 tttcgttaca cttggtcatt aattgtagtt atattaatgc gcaaatgtta ttgcttgact
     2341 aaaggttctt gtgttgtatg agcttatcag tcttttcctt gtgttcaatc gaagacgact
     2401 atggatcact tgcatcaggg ttgatgtcag aattggctct acttgttgtg cagagacgac
     2461 tacgcagggt tggaccgttg cagctaaagt gtatcaagtt tgtccaatgg ttacactatt
     2521 gtctttcttg cctatggatt gcaaaagcgg agcgccatct gagttatgtc tagatactcg
     2581 aaataaaaat actttattgc tcttacaact ttaaattctg tttgttttaa gttcctttgg
     2641 tagaatgtct atattacatt tttctgatat ataaggactg catgttgact ataggtattg
     2701 tgcctcgtat gaccattgat agagaatagc ccaagcccaa gcccaagccc aataatgata
     2761 ttgaagagtt taaggccaag cccaatagga atactatata ttagtatttc ggtctctaag
     2821 aagacttggg taggaagttg caatggtatt gctacttctc tgattagcca gtgaggtatc
     2881 cttgtggatc tcaactgatt ttgtaaactt tatttacaat tgaataacat atctttatca
     2941 ttccattgtt ctttattatt caatccagct gctgttgtta tacttcaatt tctgctgtta
     3001 taattttgtt tcccggcgat ggaacaaaat tataatttga agtataattt taaataacta
     3061 attaactaac tgactaacta attaaataac taatatac
//
LOCUS       XM_071830064            2489 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SNW/SKI-interacting protein
            A-like (LOC139839864), transcript variant X4, mRNA.
ACCESSION   XM_071830064
VERSION     XM_071830064.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2489
                     /gene="LOC139839864"
                     /note="SNW/SKI-interacting protein A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139839864"
     CDS             23..1837
                     /gene="LOC139839864"
                     /codon_start=1
                     /product="SNW/SKI-interacting protein A-like"
                     /protein_id="XP_071686165.1"
                     /db_xref="GeneID:139839864"
                     /translation="MAALKEILPPAKSSAATFYDHSSDPWFKQRYSAPTEEERAEIIK
                     TNTIPLYNTAERLKYRPSKAHDYGDGGAFPEIHYAQYPLDMGRKKDSSSGPKTLPVTV
                     DNRGNLTFDAIVKQNENAKKIVYSQHRDIVPKILKDEEEEDDEDDDEKQKEIEETTLQ
                     TKAALEKIVNVRLSAAQPKNVQTQSQDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPV
                     DPLEPPKFKHKRVPKANGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIP
                     LDKRLAADGRGLQEVQINDNFAKLSEALYVAEQRAREAVAMRSKVQKEMMLKDKERKE
                     QELRALAQKARSERTGTGTTVGAGSFVPSEKNMMDVDEPVEHEYRRVKDRDGPRESKE
                     EREERIQREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASGG
                     SRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDEMY
                     GGADEQLEKIRKTERFKPDKGFSGAGEKSGPRDGPVEFEMEKDPFGLDQFLDNVKGGK
                     KPLDKVGSGGTMRASGGSSTREGYEGSGRSRIGFQKGR"
     misc_feature    596..1063
                     /gene="LOC139839864"
                     /note="SKIP/SNW domain; Region: SKIP_SNW; pfam02731"
                     /db_xref="CDD:460666"
ORIGIN      
        1 tttgtttcag gtttttgtca ccatggctgc tctgaaggag attttaccac ctgcaaaatc
       61 atctgctgct accttctatg atcactcgag cgatccatgg ttcaagcaaa gatacagtgc
      121 tccgacagag gaggagcgag ctgagattat taaaactaat accattccat tgtataatac
      181 agcagaacgt ttgaagtatc ggccatcaaa ggcacatgac tatggtgatg ggggagcatt
      241 tcccgagatt cattatgcgc aatatcctct tgatatgggt aggaagaaag attcatcttc
      301 tggtccaaag acgttgcctg tcacagttga taaccgtggg aacttaacat ttgatgctat
      361 tgtgaagcag aatgaaaatg ctaagaagat tgtttattca cagcacagag atatcgtccc
      421 aaagattttg aaagatgagg aagaagaaga tgacgaggat gatgatgaga agcagaaaga
      481 gattgaagag acaacacttc agacaaaagc agctcttgag aagattgtga atgttagatt
      541 aagtgcagct cagccaaaaa atgtccagac tcagtctcaa gattcaaagt tcatcaagta
      601 caagccttct cagcagtcag ctgcatttaa ctcgggtgca aaggagagaa ttattagaat
      661 ggttgagatg cctgtggacc ctttagagcc gccaaagttt aaacacaaac gagtcccaaa
      721 agctaatggt tcaccgccgg ttccggtcat gcactcccct ccccgtcctg ttactgtaaa
      781 agaccaacaa gattggaaga ttcctccgtg tatttctaac tggaagaatc ctaaagggta
      841 cacaatccca cttgataaac gtttggcagc cgatggtaga ggacttcaag aagtccaaat
      901 taacgataat ttcgcaaagc tttctgaagc gttatatgta gcagaacaga gagctcgaga
      961 agctgttgcc atgaggtcca aagttcaaaa agaaatgatg ttgaaagaca aagaaagaaa
     1021 agaacaagaa ttacgagcat tggctcagaa agcaagatct gaaagaactg gcaccgggac
     1081 tactgttggt gctggttcat ttgtaccctc tgaaaagaat atgatggatg tggatgagcc
     1141 tgttgaacat gaatatagac gtgtgaagga ccgggatgga cctagagaat caaaagagga
     1201 gagagaagag agaattcaaa gagaaaagat tcgtgaagag agacgtagag agagagaaag
     1261 agagagaaga ttggaggcta aagatgcagc gatggggaag aagagtaaaa tcacgagaga
     1321 ccgagaccgg gacattagtg aaaaggttgc actcggaatg gcatcaggtg gatcacgagg
     1381 gggtgaagta atgtacgatc agcgtttgtt taatcaagaa aaggggatgg attctggttt
     1441 tgcaactgat gatcaataca atgtgtatga taaaggcttg ttcactgcac aaccgacttt
     1501 atccacgtta tataggccaa agaaagatgc agatgatgag atgtatggtg gggccgatga
     1561 gcagctcgag aagatcagga agactgagcg gtttaaaccc gataagggtt tctctggtgc
     1621 tggtgaaaag agtggaccaa gagatggtcc agtcgagttt gagatggaaa aagatccatt
     1681 tggtctggac caatttttgg acaatgttaa aggagggaag aaaccgttgg ataaagttgg
     1741 aagtggagga acaatgagag caagtggtgg gtcgtctacc cgagaagggt atgaaggttc
     1801 tggtaggtct cgtatcgggt tccaaaaggg gcgctaaatt tataatacaa ttgtcgatgg
     1861 gcccattaga tactgtgggt atttattgtt gttctactca actgtggtta ttagtttgtg
     1921 ttatttgtac ttggggcgta ctttggttgt agtaatggat tcaagaatca agctagtcac
     1981 attgttatat ggttactctt tgtctgtttt tctatatctc ctgaatatgt taacttttgt
     2041 cggttttttt gttgatagga acaagtgaat aacatagctt gtctgttgac tgaactgttc
     2101 ctttcctggt ttgtttctct cttctattta ttacattgga tggattgctt tggggaagca
     2161 agtgcatctc agctaattta cttatcttta gaatattgca gatacattgg atcatatcaa
     2221 tatgttttct aaccacttca tcttgattat gggttaaaat ataagactct accttataac
     2281 tttcgttaca cttggtcatt aattgtagtt atattaatgc gcaaatgtta ttgcttgact
     2341 aaaggttctt gtgttgtatg agcttatcag tcttttcctt gtgttcaatc gaagacgact
     2401 atggatcact tgcatcagag acgactacgc agggttggac cgttgcagct aaagtaatat
     2461 tttacttcat accaaaaccc tattttctt
//
LOCUS       XM_071830065             725 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome b5
            (LOC139839865), mRNA.
ACCESSION   XM_071830065
VERSION     XM_071830065.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..725
                     /gene="LOC139839865"
                     /note="cytochrome b5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 37 Proteins"
                     /db_xref="GeneID:139839865"
     CDS             106..516
                     /gene="LOC139839865"
                     /codon_start=1
                     /product="cytochrome b5"
                     /protein_id="XP_071686166.1"
                     /db_xref="GeneID:139839865"
                     /translation="MASDLKQFVFDDVSKHNKTKDCWLIIDGKVYDVTPFMEDHPGGD
                     EVLLAATGKDATDDFEDVGHSDDARELMHKYLIGKVDKATVPKKRQYVAPADKVYNQD
                     KTQDFVVKILQFLVPLVILGLAFVVRSYTKEKSA"
     misc_feature    136..348
                     /gene="LOC139839865"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     Region: Cyt-b5; pfam00173"
                     /db_xref="CDD:459698"
     polyA_site      725
                     /gene="LOC139839865"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcgtacttt tatgttgaat aaaatccaat aaattttgga ccggcagagc gttgaaaaca
       61 atcgggccgg cgttaaatca ataagtttac aactatcaga taccaatggc atcagatctg
      121 aagcaattcg tattcgacga tgtctcaaaa cacaacaaaa ctaaggactg ttggctcata
      181 attgatggaa aggtttatga tgtaactccg tttatggagg atcaccctgg tggtgatgaa
      241 gtcttgctag cagcaactgg gaaagatgca acggatgatt ttgaggatgt gggtcacagt
      301 gatgatgcac gagagttgat gcacaaatat ttgatcggca aagtagacaa ggctacggtt
      361 cctaagaaac gtcaatacgt tgcacctgct gacaaggtat acaatcagga caagactcaa
      421 gatttcgttg ttaagatttt acagtttctc gtgcctcttg tgatccttgg gttggctttt
      481 gtagtcagat cttacacaaa ggagaagtct gcttgagaag ttatttgagg tctagattgt
      541 ttatcgtgtt gaatgtttaa gttattggga ttgtttgtgt tggttcatgg tgtatgtgac
      601 tttggtggct accatattat acatggttag tttgttgtcg tttttgcatt aagatttatt
      661 tgtaactcgt atcgtttttg gttatttaac caataattgc tccaagtgag catggttgtc
      721 ttaaa
//
LOCUS       XM_071830066            2168 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutathione hydrolase 3-like
            (LOC139839866), mRNA.
ACCESSION   XM_071830066
VERSION     XM_071830066.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2168
                     /gene="LOC139839866"
                     /note="glutathione hydrolase 3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139839866"
     CDS             28..1953
                     /gene="LOC139839866"
                     /codon_start=1
                     /product="glutathione hydrolase 3-like"
                     /protein_id="XP_071686167.1"
                     /db_xref="GeneID:139839866"
                     /translation="MMEKTQNIKTPFLSKTEDYNYTNNKWIISLWFILSIISLTFFVV
                     TFGGNPSSSWLDGGRKFRKSVQSDDALQTQKTVTGVQVGNAVESLEAVVAADDARCSE
                     IGVSFLRAGGHAVDAAVAVALCLGVVSPMSSGVGGGGFMVVRSVDTLKTQAFDFRETA
                     PLAASQNMYENDLDSKYAGALSMGVPAEIAGLYEGWLTYGRLPWKSLFGPAIRLAKDG
                     FTVAPYLASKISSYAALIKNDPGLQQVFAPNGEILKAGDICYNPKLSWSLEVIANEGP
                     KAFYDGVIGENLVKDVQDAGGILTMEDLRNYKVEVTDAVAVDTMGYTILGMPPPSSGT
                     LGLALMSNILESYESSNAAKGSLGLHRFIESLKHMLAIRMDLGDPEFVNISKTVADML
                     SPSFAKNIQKRIFDNTTFPSAYYMPRWSQLQDHGTSHFCIVDDDRNAVSLTTTVNYVF
                     GSGVLSRSTGILLNNEMGDFSAPTEISSDTLPPSPSNFIQPNKRPLSSMTPIIVLKNE
                     QLAGVIGGSGGMYIIPAVAQVFINHFILGMDPLNAVQSPRVYHKLIPNVVHYENWTVI
                     DGDHIELSDFRKRFLEERNHVLEPLAGGAVCQVIVQTIKKQSENRKMMYDHEQQVLKG
                     ILTAVSDPRKDGLAAAC"
     misc_feature    121..1947
                     /gene="LOC139839866"
                     /note="Gamma-glutamyltranspeptidase; Region:
                     G_glu_transpept; cl19223"
                     /db_xref="CDD:450276"
     polyA_site      2168
                     /gene="LOC139839866"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcctcacgca ttctctatct gtgaaagatg atggagaaga cacagaacat aaaaactcca
       61 tttttgagta aaacagaaga ttacaattat actaacaaca aatggattat atctctgtgg
      121 ttcatcttgt caatcatctc tctcactttt tttgtcgtta cattcggagg taatccaagt
      181 tctagctggt tagatggtgg aaggaagttt agaaagagtg tacaatccga tgatgcgtta
      241 caaacacaga aaaccgtcac tggagtacaa gttggtaatg cagttgagtc gttagaagct
      301 gtggttgctg ctgacgatgc acgttgctcc gagattggag tatcgttcct tcgagcaggc
      361 ggtcatgctg ttgatgctgc tgtggctgtc gctttatgtc ttggagtcgt gagtccgatg
      421 tctagtggtg ttggcggtgg cggttttatg gtggttcgtt ctgtcgatac gttaaaaaca
      481 caagcgtttg attttaggga aaccgctccc ttggctgctt cacagaatat gtacgagaac
      541 gatctagact ccaaatatgc aggagcgttg tcaatgggcg tacctgcaga gatagccggt
      601 ctttacgaag gttggttaac gtacgggaga ctgccttgga agtcattgtt cggtccagct
      661 attcggcttg cgaaagacgg gtttacagtt gcaccttatc ttgctagtaa aatttcaagt
      721 tatgcagctt tgattaagaa tgatcctggt ttgcaacaag tgtttgctcc aaatggggag
      781 attttaaaag ctggggacat ttgttataac ccgaagctta gttggagttt agaagttata
      841 gcaaacgaag gaccgaaagc gttttatgat ggcgttatag gggagaattt ggttaaggat
      901 gttcaagatg caggtgggat tttgacaatg gaagatttaa ggaattataa agttgaagtt
      961 acggatgcag ttgcagtcga tacgatgggg tatactattt tagggatgcc gcccccatca
     1021 agcggtacct tggggctagc tttgatgtca aacattttag aaagttatga gagctcaaat
     1081 gctgcaaaag gatcgttggg tttacaccgt tttatagaaa gtttgaagca catgcttgct
     1141 attcggatgg atttgggtga cccggagttc gttaatataa gcaagactgt agccgatatg
     1201 ctttcaccct cattcgcgaa gaacattcaa aagcggattt ttgacaacac tactttccct
     1261 tctgcatact acatgcccag gtggagccaa cttcaagatc atggtacaag ccatttttgc
     1321 atagtggacg atgatagaaa tgcagtatcg ttgacaacta cagtgaatta tgtgtttgga
     1381 agtggggttt tgtctcgttc gacaggcatt ttgctaaaca atgagatggg tgacttttca
     1441 gctcctactg aaatatcatc agataccctt cctccttcgc cttctaattt tatccaacca
     1501 aacaagaggc cattatcgtc catgactcca attattgtcc tcaagaatga acagttagcc
     1561 ggggtgattg gaggcagtgg cggtatgtac attattccag cagttgcaca agtttttatc
     1621 aaccatttta tcttaggcat ggacccttta aacgcagttc agtcgcctcg agtctaccac
     1681 aagttgatac caaatgtagt gcattatgaa aactggacag taattgatgg tgatcatatc
     1741 gagctttcag actttcgaaa gagattcctc gaggaaagaa atcatgtttt ggaaccacta
     1801 gccggtggag cagtctgtca agttatcgtt caaacgataa agaaacaaag tgagaataga
     1861 aaaatgatgt atgatcatga acaacaagtg ttgaaaggga ttcttactgc ggtaagcgat
     1921 ccaagaaaag acggcttggc agctgcttgc tgataattat cactccctcg tatccgttga
     1981 tattatcgac gtaaattgta gtagtcgtta attgaggtta tctggttaat acttggtttc
     2041 ccacttggaa aatttataca agtccaagaa caataaaaga aaaaacaact caatcttcac
     2101 caagctatga atgtattatt tgctaattgt gtgtacgatt atagtgtatc attgtgtttt
     2161 ttttttaa
//
LOCUS       XR_011757123            2914 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839867), transcript variant X1, ncRNA.
ACCESSION   XR_011757123
VERSION     XR_011757123.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2914
                     /gene="LOC139839867"
                     /note="uncharacterized LOC139839867; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839867"
     ncRNA           1..2914
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839867"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839867"
ORIGIN      
        1 ttaattcttg aacgagatac aaattgaatc actggatttt ttttatttcg gctgacagca
       61 gtgctcctaa tcttcattca gtatttcata caaattggta ggaaggttta tctgtagcta
      121 attaaggatg aaaagaatga caactctttc gtcagtgttt aatatactgt agttttgttt
      181 aatatactct gttgatgatg attagtgcat ggtttttgca aattgttata tcatattgct
      241 tagaaggata gcaaggaagg ggcaggatca aagtttgaag ggtactgaaa gtgtctatat
      301 ctcttagacg gaagctgatg ctattcacca attcgctaac tataaaggtt accccatgta
      361 ttttcggata tcaaaaattt caatggatgg atgactatat ctgcatcaat ggctgtgcct
      421 atggatattt gacgctttga cgcgttgatt cgataaagtg acacttatgc tttatctcga
      481 acaacttctt gattctaaat gttcacatca tccaaaatgt ttagcaacac atatacccta
      541 aatgataaca tgtactgttc aacattttgt caaaattagg attttcttgt tgatgtgatg
      601 gtagatgggg ttcgcaaaca caaaagcgca ttccatattc aagggtcgag aaggaatttt
      661 gcaagcatat atcctttacc aatattgttg aatttgaaga aagggctctt ttaaggtaat
      721 aaatcttttc aaaacatgaa agacaatctt ttgttccttt ttctttctat atgtattttt
      781 cccttaagaa tcttgtgcag ctttttatgg agttgaatat gcaatttggg atgattatga
      841 tgtttcaact tcaagttatc ttatctttgt attgacaaag agcttcttga gttgatcata
      901 tagcaaaaag acttgaatcg aaatcttagt atttcttata tctactacat tattcttttt
      961 ttaaacatca gttatatatt aatgcaacca ttcaatagtt acatacacta tattttgttg
     1021 aatgcagaat tggagctggt ccagatgctt gtctaagtgt tgatgttttc tgaacatgta
     1081 acgttgttgc aggggtggat tcacaatttg aatgagatga atccgatcga gttttttctc
     1141 agacaaaaat caatcgttct tttttatgtc cgtgtagggt tttgtttcta taataacttg
     1201 atatttgggg ttaaaatgta attacacata tcacttgaca tcgatgttcc ataacatagt
     1261 cacaaggtag ttctaatata tccgcctgaa gattgcagtg tgaagtctcc attgtcattc
     1321 actcttcaga tatgtctagt tgaagagata tttaatgaag tttcaattga aagatccgtt
     1381 gttcagttca ataatgggtc agaactctcg ttattcaacc ttctggagct gtaactgctt
     1441 ctgggttcga ggagttggta aaggtatggg ccatacaggg cagagtggaa ttatcaaata
     1501 caaagatttg gatatttgac gcgatgaacc tgatgatgtg acacttatgc tgattcgata
     1561 tgtaacaagg aaatacgata gatgcggccc gcaaacagaa aagcgcattc catattcaag
     1621 ggttgagaag aagttttcaa gcctataagc tctaccaata ttgttgaatt tgaggaaggg
     1681 ctctttgaag aaatggagct ggtcgaaatg cttgtctggg aatctctttt gtggaactta
     1741 gaaactgaag ccattcaaga agtgtttcta tccatatgct gaaaagcatt gtcatcagga
     1801 agtataagtc ctatgcattc tgtttgatag atgagatgac gaaaaatcaa ctgttgaaat
     1861 gttgggggct ctaaagtggt gcagctttac taatgatcct agcgaggaga tacatggaga
     1921 aattaactgt tgaactgtta acttcaatgg ctgtttatct ggggcttcat ttgtgctcgc
     1981 tttgcaacta gttgattttg gcttcacgga cagtcttctt ttttcctagt tctggaaaca
     2041 gaataactct gaaccctttc ggctaggtgg ctaattacac agatggtagg atgagaacat
     2101 gatgcaatta ttacgttaga gctgacggcc gtgtgcccaa cttccattca gtatcttaca
     2161 caaattggta ggaaggtgtt gtcgagctta ttgaggatga aaagaatgac aactctgaat
     2221 taagctaata ctttggttga atctaggctt tgacttaaat ggttcactct ttagtatggg
     2281 tcaaaacagt cgagattgat ttgggcttgg ctgtacttat gtattcatac attggaatgc
     2341 gttatcacac aattctgtat tgcaacataa tgacttctcc tcatgtaatt attcagcgtc
     2401 taatcatatc agaggtagtt agtagttccc gtactagctt gaagattggg atggtaagga
     2461 gttttttgta acttatgaaa atggagtagg atatagtatg aaccttaact gtgaggctcg
     2521 atgtgaagct gcagacactt agggagctta gaaatattat aaggacgtga tttttggtgg
     2581 cactcgtact agctaagatg ttgctggtat ggtatttttg gtggcattcg tacctgctaa
     2641 catgctacta tggttggtct cgtgatcctg tttctttgtc ttgtaactgg tttacaatag
     2701 cttgtcttat ttgtttcttt ggtgaatagc tacaaaaaag catccagatg ttgatgacgc
     2761 ttgtttttga tatcgtcaac tcgtcaaggt tcccgattca gaatccaatc acagtcgaac
     2821 atttactttg acaatatggt agggtgtgaa gagccttttt ttttttatag atgttacttt
     2881 tacgtatttt cttgttttaa tgtgtatgtg tatg
//
LOCUS       XR_011757124            2627 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839867), transcript variant X2, ncRNA.
ACCESSION   XR_011757124
VERSION     XR_011757124.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2627
                     /gene="LOC139839867"
                     /note="uncharacterized LOC139839867; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839867"
     ncRNA           1..2627
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839867"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839867"
ORIGIN      
        1 ttaattcttg aacgagatac aaattgaatc actggatttt ttttatttcg gctgacagca
       61 gtgctcctaa tcttcattca gtatttcata caaattggta ggaaggttta tctgtagcta
      121 attaaggatg aaaagaatga caactctttc gtcagtgttt aatatactgt agttttgttt
      181 aatatactct gttgatgatg attagtgcat ggtttttgca aattgttata tcatattgct
      241 tagaaggata gcaaggaagg ggcaggatca aagtttgaag ggtactgaaa gtgtctatat
      301 ctcttagacg gaagctgatg ctattcacca attcgctaac tataaaggtt accccatgta
      361 ttttcggata tcaaaaattt caatggatgg atgactatat ctgcatcaat ggctgtgcct
      421 atggatattt gacgctttga cgcgttgatt cgataaagtg acacttatgc tttatctcga
      481 acaacttctt gattctaaat gttcacatca tccaaaatgt ttagcaacac atatacccta
      541 aatgataaca tgtactgttc aacattttgt caaaattagg attttcttgt tgatgtgatg
      601 gtagatgggg ttcgcaaaca caaaagcgca ttccatattc aagggtcgag aaggaatttt
      661 gcaagcatat atcctttacc aatattgttg aatttgaaga aagggctctt ttaaggtaat
      721 aaatcttttc aaaacatgaa agacaatctt ttgttccttt ttctttctat atgtattttt
      781 cccttaagaa tcttgtgcag ctttttatgg agttgaatat gcaatttggg atgattatga
      841 tgtttcaact tcaagttatc ttatctttgt attgacaaag agcttcttga gttgatcata
      901 tagcaaaaag acttgaatcg aaatcttagt atttcttata tctactacat tattcttttt
      961 ttaaacatca gttatatatt aatgcaacca ttcaatagtt acatacacta tattttgttg
     1021 aatgcagaat tggagctggt ccagatgctt gtctaagtgt tgatgttttc tgaacatgta
     1081 acgttgttgc aggggtggat tcacaatttg aatgagatga atccgatcga gttttttctc
     1141 agacaaaaat caatcgttct tttttatgtc cgtgtagggt tttgtttcta taataacttg
     1201 atatttgggg ttaaaatgta attacacata tcacttgaca tcgatgttcc ataacatagt
     1261 cacaaggtag ttctaatata tccgcctgaa gattgcagtg tgaagtctcc attgtcattc
     1321 actcttcaga tatgtctagt tgaagagata tttaatgaag tttcaattga aagatccgtt
     1381 gttcagttca ataatgggtc agaactctcg ttattcaacc ttctggagct gtaactgctt
     1441 ctgggttcga ggagttggta aaggtatggg ccatacaggg cagagtggaa ttatcaaata
     1501 caaagatttg gatatttgac gcgatgaacc tgatgatgtg acacttatgc tgattcgata
     1561 tgtaacaagg aaatacgata gatgcggccc gcaaacagaa aagcgcattc catattcaag
     1621 ggttgagaag aagttttcaa gcctataagc tctaccaata ttgttgaatt tgaggaaggg
     1681 ctctttgaag aaatggagct ggtcgaaatg cttgtctggg aatctctttt gtggaactta
     1741 gaaactgaag ccattcaaga agtgtttcta tccatatgct gaaaagcatt gtcatcagga
     1801 agtataagtc ctatgcattc tgtttgatag atgagatgac gaaaaatcaa ctgttgaaat
     1861 gttgggggct ctaaagtggt gcagctttac taatgatcct agcgaggaga tacatggaga
     1921 aattaactgt tgaactgtta acttcaatgg ctgtttatct ggggcttcat ttgtgctcgc
     1981 tttgcaacta gttgattttg gcttcacgga cagtcttctt ttttcctagt tctggaaaca
     2041 gaataactct gaaccctttc ggctaggtgg ctaattacac agatggtagg atgagaacat
     2101 gatgcaatta ttacgttaga gctgacggcc gtgtgcccaa cttccattca gtatcttaca
     2161 caaattggta ggaaggtgtt gtcgagctta ttgaggatga aaagaatgac aactctgaat
     2221 taagctaata ctttggttga atctaggctt tgacttaaat ggttcactct ttagtatggg
     2281 tcaaaacagt cgagattgat ttgggcttgg ctgtacttat gtattcatac attggaatgc
     2341 gttatcacac aattctgtat tgcaacataa tgacttctcc tcatgtaatt attcagcgtc
     2401 taatcatatc agaggtagtt agtagttccc gtactagctt gaagattggg atggtaagga
     2461 gttttttgta acttatgaaa atggagtagg atatagtatg aaccttaact gtgaggctcg
     2521 atgtgaagct gcagacactt agggagctta gaaatattat aagatggtcg cacatcgtgt
     2581 ttgtagaaac aaggttgctg gagttcttca gtttgattat agtcatg
//
LOCUS       XR_011757125            2837 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839867), transcript variant X3, ncRNA.
ACCESSION   XR_011757125
VERSION     XR_011757125.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2837
                     /gene="LOC139839867"
                     /note="uncharacterized LOC139839867; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839867"
     ncRNA           1..2837
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839867"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839867"
ORIGIN      
        1 ttaattcttg aacgagatac aaattgaatc actggatttt ttttatttcg gctgacagca
       61 gtgctcctaa tcttcattca gtatttcata caaattggta ggaaggttta tctgtagcta
      121 attaaggatg aaaagaatga caactctttc gtcagtgttt aatatactgt agttttgttt
      181 aatatactct gttgatgatg attagtgcat ggtttttgca aattgttata tcatattgct
      241 tagaaggata gcaaggaagg ggcaggatca aagtttgaag ggtactgaaa gtgtctatat
      301 ctcttagacg gaagctgatg ctattcacca attcgctaac tataaaggtt accccatgta
      361 ttttcggata tcaaaaattt caatggatgg atgactatat ctgcatcaat ggctgtgcct
      421 atggatattt gacgctttga cgcgttgatt cgataaagtg acacttatgc tttatctcga
      481 acaacttctt gattctaaat gttcacatca tccaaaatgt ttagcaacac atatacccta
      541 aatgataaca tgtactgttc aacattttgt caaaattagg attttcttgt tgatgtgatg
      601 gtagatgggg ttcgcaaaca caaaagcgca ttccatattc aagggtcgag aaggaatttt
      661 gcaagcatat atcctttacc aatattgttg aatttgaaga aagggctctt ttaaggtaat
      721 aaatcttttc aaaacatgaa agacaatctt ttgttccttt ttctttctat atgtattttt
      781 cccttaagaa tcttgtgcag ctttttatgg agttgaatat gcaatttggg atgattatga
      841 tgtttcaact tcaagttatc ttatctttgt attgacaaag agcttcttga gttgatcata
      901 tagcaaaaag acttgaatcg aaatcttagt atttcttata tctactacat tattcttttt
      961 ttaaacatca gttatatatt aatgcaacca ttcaatagtt acatacacta tattttgttg
     1021 aatgcagaat tggagctggt ccagatgctt gtctaagtgt tgatgttttc tgaacatgta
     1081 acgttgttgc aggggtggat tcacaatttg aatgagatga atccgatcga gttttttctc
     1141 agacaaaaat caatcgttct tttttatgtc cgtgtagggt tttgtttcta taataacttg
     1201 atatttgggg ttaaaatgta attacacata tcacttgaca tcgatgttcc ataacatagt
     1261 cacaaggtag ttctaatata tccgcctgaa gattgcagtg tgaagtctcc attgtcattc
     1321 actcttcaga tatgtctagt tgaagagata tttaatgaag tttcaattga aagatccgtt
     1381 gttcagttca ataatgggtc agaactctcg ttattcaacc ttctggagct gtaactgctt
     1441 ctgggttcga ggagttggta aaggtatggg ccatacaggg cagagtggaa ttatcaaata
     1501 caaagatttg gatatttgac gcgatgaacc tgatgatgtg acacttatgc tgattcgata
     1561 tgtaacaagg aaatacgata gatgcggccc gcaaacagaa aagcgcattc catattcaag
     1621 ggttgagaag aagttttcaa gcctataagc tctaccaata ttgttgaatt tgaggaaggg
     1681 ctctttgaag aaatggagct ggtcgaaatg cttgtctggg aatctctttt gtggaactta
     1741 gaaactgaag ccattcaaga agtgtttcta tccatatgct gaaaagcatt gtcatcagga
     1801 agtataagtc ctatgcattc tgtttgatag atgagatgac gaaaaatcaa ctgttgaaat
     1861 gttgggggct ctaaagtggt gcagctttac taatgatcct agcgaggaga tacatggaga
     1921 aattaactgt tgaactgtta acttcaatgg ctgtttatct ggggcttcat ttgtgctcgc
     1981 tttgcaacta gttgattttg gcttcacgga cagtcttctt ttttcctagt tctggaaaca
     2041 gaataactct gaaccctttc ggctaggtgg ctaattacac agatggtagg atgagaacat
     2101 gatgcaatta ttacgttaga gctgacggcc gtgtgcccaa cttccattca gtatcttaca
     2161 caaattggta ggaaggtgtt gtcgagctta ttgaggatga aaagaatgac aactctgaat
     2221 taagctaata ctttggttga atctaggctt tgacttaaat ggttcactct ttagtatggg
     2281 tcaaaacagt cgagattgat ttgggcttgg ctgtacttat gtattcatac attggaatgc
     2341 gttatcacac aattctgtat tgcaacataa tgacttctcc tcatgtaatt attcagcgtc
     2401 taatcatatc agaggtagtt agtagttccc gtactagctt gaagattggg atggtaagga
     2461 gttttttgta acttatgaaa atggagtagg atatagtatg aaccttaact gtgaggctcg
     2521 atgtgaagct gcagacactt agggagctta gaaatattat aaggacgtga tttttggtgg
     2581 cactcgtact agctaagatg ttgctggtat ggtatttttg gtggcattcg tacctgctaa
     2641 catgctacta tgctacaaaa aagcatccag atgttgatga cgcttgtttt tgatatcgtc
     2701 aactcgtcaa ggttcccgat tcagaatcca atcacagtcg aacatttact ttgacaatat
     2761 ggtagggtgt gaagagcctt ttttttttta tagatgttac ttttacgtat tttcttgttt
     2821 taatgtgtat gtgtatg
//
LOCUS       XR_011757126            2862 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839867), transcript variant X4, ncRNA.
ACCESSION   XR_011757126
VERSION     XR_011757126.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2862
                     /gene="LOC139839867"
                     /note="uncharacterized LOC139839867; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839867"
     ncRNA           1..2862
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839867"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839867"
ORIGIN      
        1 ttaattcttg aacgagatac aaattgaatc actggatttt ttttatttcg gctgacagca
       61 gtgctcctaa tcttcattca gtatttcata caaattggta ggaaggttta tctgtagcta
      121 attaaggatg aaaagaatga caactctttc gtcagtgttt aatatactgt agttttgttt
      181 aatatactct gttgatgatg attagtgcat ggtttttgca aattgttata tcatattgct
      241 tagaaggata gcaaggaagg ggcaggatca aagtttgaag ggtactgaaa gtgtctatat
      301 ctcttagacg gaagctgatg ctattcacca attcgctaac tataaaggtt accccatgta
      361 ttttcggata tcaaaaattt caatggatgg atgactatat ctgcatcaat ggctgtgcct
      421 atggatattt gacgctttga cgcgttgatt cgataaagtg acacttatgc tttatctcga
      481 acaacttctt gattctaaat gttcacatca tccaaaatgt ttagcaacac atatacccta
      541 aatgataaca tgtactgttc aacattttgt caaaattagg attttcttgt tgatgtgatg
      601 gtagatgggg ttcgcaaaca caaaagcgca ttccatattc aagggtcgag aaggaatttt
      661 gcaagcatat atcctttacc aatattgttg aatttgaaga aagggctctt ttaaggtaat
      721 aaatcttttc aaaacatgaa agacaatctt ttgttccttt ttctttctat atgtattttt
      781 cccttaagaa tcttgtgcag ctttttatgg agttgaatat gcaatttggg atgattatga
      841 tgtttcaact tcaagttatc ttatctttgt attgacaaag agcttcttga gttgatcata
      901 tagcaaaaag acttgaatcg aaatcttagt atttcttata tctactacat tattcttttt
      961 ttaaacatca gttatatatt aatgcaacca ttcaatagtt acatacacta tattttgttg
     1021 aatgcagaat tggagctggt ccagatgctt gtctaagtgt tgatgttttc tgaacatgta
     1081 acgttgttgc aggggtggat tcacaatttg aatgagatga atccgatcga gttttttctc
     1141 agacaaaaat caatcgttct tttttatgtc cgtgtagggt tttgtttcta taataacttg
     1201 atatttgggg ttaaaatgta attacacata tcacttgaca tcgatgttcc ataacatagt
     1261 cacaaggtag ttctaatata tccgcctgaa gattgcagtg tgaagtctcc attgtcattc
     1321 actcttcaga tatgtctagt tgaagagata tttaatgaag tttcaattga aagatccgtt
     1381 gttcagttca ataatgggtc agaactctcg ttattcaacc ttctggagct gtaactgctt
     1441 ctgggttcga ggagttggta aaggtatggg ccatacaggg cagagtggaa ttatcaaata
     1501 caaagatttg gatatttgac gcgatgaacc tgatgatgtg acacttatgc tgattcgata
     1561 tgtaacaagg aaatacgata gatgcggccc gcaaacagaa aagcgcattc catattcaag
     1621 ggttgagaag aagttttcaa gcctataagc tctaccaata ttgttgaatt tgaggaaggg
     1681 ctctttgaag aaatggagct ggtcgaaatg cttgtctggg aatctctttt gtggaactta
     1741 gaaactgaag ccattcaaga agtgtttcta tccatatgat gagatgacga aaaatcaact
     1801 gttgaaatgt tgggggctct aaagtggtgc agctttacta atgatcctag cgaggagata
     1861 catggagaaa ttaactgttg aactgttaac ttcaatggct gtttatctgg ggcttcattt
     1921 gtgctcgctt tgcaactagt tgattttggc ttcacggaca gtcttctttt ttcctagttc
     1981 tggaaacaga ataactctga accctttcgg ctaggtggct aattacacag atggtaggat
     2041 gagaacatga tgcaattatt acgttagagc tgacggccgt gtgcccaact tccattcagt
     2101 atcttacaca aattggtagg aaggtgttgt cgagcttatt gaggatgaaa agaatgacaa
     2161 ctctgaatta agctaatact ttggttgaat ctaggctttg acttaaatgg ttcactcttt
     2221 agtatgggtc aaaacagtcg agattgattt gggcttggct gtacttatgt attcatacat
     2281 tggaatgcgt tatcacacaa ttctgtattg caacataatg acttctcctc atgtaattat
     2341 tcagcgtcta atcatatcag aggtagttag tagttcccgt actagcttga agattgggat
     2401 ggtaaggagt tttttgtaac ttatgaaaat ggagtaggat atagtatgaa ccttaactgt
     2461 gaggctcgat gtgaagctgc agacacttag ggagcttaga aatattataa ggacgtgatt
     2521 tttggtggca ctcgtactag ctaagatgtt gctggtatgg tatttttggt ggcattcgta
     2581 cctgctaaca tgctactatg gttggtctcg tgatcctgtt tctttgtctt gtaactggtt
     2641 tacaatagct tgtcttattt gtttctttgg tgaatagcta caaaaaagca tccagatgtt
     2701 gatgacgctt gtttttgata tcgtcaactc gtcaaggttc ccgattcaga atccaatcac
     2761 agtcgaacat ttactttgac aatatggtag ggtgtgaaga gccttttttt ttttatagat
     2821 gttactttta cgtattttct tgttttaatg tgtatgtgta tg
//
LOCUS       XR_011757127            2885 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839867), transcript variant X5, ncRNA.
ACCESSION   XR_011757127
VERSION     XR_011757127.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2885
                     /gene="LOC139839867"
                     /note="uncharacterized LOC139839867; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839867"
     ncRNA           1..2885
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839867"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839867"
ORIGIN      
        1 ttaattcttg aacgagatac aaattgaatc actggatttt ttttatttcg gctgacagca
       61 gtgctcctaa tcttcattca gtatttcata caaattggta ggaaggttta tctgtagcta
      121 attaaggatg aaaagaatga caactctttc gtcagtgttt aatatactgt agttttgttt
      181 aatatactct gttgatgatg attagtgcat ggtttttgca aattgttata tcatattgct
      241 tagaaggata gcaaggaagg ggcaggatca aagtttgaag ggtactgaaa gtgtctatat
      301 ctcttagacg gaagctgatg ctattcacca attcgctaac tataaaggtt accccatgta
      361 ttttcggata tcaaaaattt caatggatgg atgactatat ctgcatcaat ggctgtgcct
      421 atggatattt gacgctttga cgcgttgatt cgataaagtg acacttatgc tttatctcga
      481 acaacttctt gattctaaat gttcacatca tccaaaatgt ttagcaacac atatacccta
      541 aatgataaca tgtactgttc aacattttgt caaaattagg attttcttgt tgatgtgatg
      601 gtagatgggg ttcgcaaaca caaaagcgca ttccatattc aagggtcgag aaggaatttt
      661 gcaagcatat atcctttacc aatattgttg aatttgaaga aagggctctt ttaaggtaat
      721 aaatcttttc aaaacatgaa agacaatctt ttgttccttt ttctttctat atgtattttt
      781 cccttaagaa tcttgtgcag ctttttatgg agttgaatat gcaatttggg atgattatga
      841 tgtttcaact tcaagttatc ttatctttgt attgacaaag agcttcttga gttgatcata
      901 tagcaaaaag acttgaatcg aaatcttagt atttcttata tctactacat tattcttttt
      961 ttaaacatca gttatatatt aatgcaacca ttcaatagtt acatacacta tattttgttg
     1021 aatgcagaat tggagctggt ccagatgctt gtctaagtgt tgatgttttc tgaacatgta
     1081 acgttgttgc aggggtggat tcacaatttg aatgagatga atccgatcga gttttttctc
     1141 agacaaaaat caatcgttct tttttatgtc cgtgtagggt tttgtttcta taataacttg
     1201 atatttgggg ttaaaatgta attacacata tcacttgaca tcgatgttcc ataacatagt
     1261 cacaaggtag ttctaatata tccgcctgaa gattgcagtg tgaagtctcc attgtcattc
     1321 actcttcaga tatgtctagt tgaagagata tttaatgaag tttcaattga aagatccgtt
     1381 gttcagttca ataatgggtc agaactctcg ttattcaacc ttctggagct gtaactgctt
     1441 ctgggttcga ggagttggta aaggtatggg ccatacaggg cagagtggaa ttatcaaata
     1501 caaagatttg gatatttgac gcgatgaacc tgatgatgtg acacttatgc tgattcgata
     1561 tgtaacaagg aaatacgata gatgcggccc gcaaacagaa aagcgcattc catattcaag
     1621 ggttgagaag aagttttcaa gcctataagc tctaccaata ttgttgaatt tgaggaaggg
     1681 ctctttgaag aaatggagct ggtcgaaatg cttgtctggg aatctctttt gtggaactta
     1741 gaaactgaag ccattcaaga agtgtttcta tccatatgct gaaaagcatt gtcatcagga
     1801 agtataagtc ctatgcattc tgtttgatag atgagatgac gaaaaatcaa ctgttgaaat
     1861 gttgggggct ctaaagtggt gcagctttac taatgatcct agcgaggaga tacatggaga
     1921 aattaactgt tgaactgtta acttcaatgg ctgtttatct ggggcttcat ttgtgctcgc
     1981 tttgcaacta gttgattttg gcttcacgga cagtcttctt ttttcctagt tctggaaaca
     2041 gaataactct gaaccctttc ggctaggtgg ctaattacac agatggttag agctgacggc
     2101 cgtgtgccca acttccattc agtatcttac acaaattggt aggaaggtgt tgtcgagctt
     2161 attgaggatg aaaagaatga caactctgaa ttaagctaat actttggttg aatctaggct
     2221 ttgacttaaa tggttcactc tttagtatgg gtcaaaacag tcgagattga tttgggcttg
     2281 gctgtactta tgtattcata cattggaatg cgttatcaca caattctgta ttgcaacata
     2341 atgacttctc ctcatgtaat tattcagcgt ctaatcatat cagaggtagt tagtagttcc
     2401 cgtactagct tgaagattgg gatggtaagg agttttttgt aacttatgaa aatggagtag
     2461 gatatagtat gaaccttaac tgtgaggctc gatgtgaagc tgcagacact tagggagctt
     2521 agaaatatta taaggacgtg atttttggtg gcactcgtac tagctaagat gttgctggta
     2581 tggtattttt ggtggcattc gtacctgcta acatgctact atggttggtc tcgtgatcct
     2641 gtttctttgt cttgtaactg gtttacaata gcttgtctta tttgtttctt tggtgaatag
     2701 ctacaaaaaa gcatccagat gttgatgacg cttgtttttg atatcgtcaa ctcgtcaagg
     2761 ttcccgattc agaatccaat cacagtcgaa catttacttt gacaatatgg tagggtgtga
     2821 agagcctttt tttttttata gatgttactt ttacgtattt tcttgtttta atgtgtatgt
     2881 gtatg
//
LOCUS       XM_071830067            3679 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides importin subunit beta-1-like
            (LOC139839868), mRNA.
ACCESSION   XM_071830067
VERSION     XM_071830067.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3679
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3679
                     /gene="LOC139839868"
                     /note="importin subunit beta-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139839868"
     CDS             149..2764
                     /gene="LOC139839868"
                     /codon_start=1
                     /product="importin subunit beta-1-like"
                     /protein_id="XP_071686168.1"
                     /db_xref="GeneID:139839868"
                     /translation="MAMEVTQILLNAQSVDGSVRKHAEDSLKQFQEQNVAGFLLSLSG
                     ELASEDKPVDSRKLAGLILKNALDAKEQHRKYELVQRWLSLDVGVKTQIKTCLLQTLS
                     SSVYEARSTASQVIAKVAGIELPQKQWPELIGSLLSNIHQAPVHIKQATLETLGYMCE
                     EVSPDVVEQEQVNKILTAVVQGMNPSEGNNDVRLAATRALYNALSFAQANFSNDMERD
                     YIMKVVCEATLSPEVKIRQAAFECLVSISSSYYEKISPYMQDIFAITAKAVKEDEEPV
                     ALQAIEFWSSICDEEIDILEDYGVDFTADSEVPCFYFIKQALPALVPMLLETLLKQEE
                     DQDQDEGAWNLAMAGGTCLGLVARTVGDDIVQLVMPFIEENITKPDWRQREGATYAFG
                     SILEGPSPNNLTPLVNVALNFMLTALNKDPNNHVKDTTAWTLGRIFEFLHGSTMETPI
                     VTPANCQQIITVLLQSMKDAPNVAEKSCGALYFLAQGFEDIGQSSPLTPFFQEIVQSL
                     LTVTHREDAGESRLRTAAYESLNEVVRCSTDETAPMVLQLVPVIMMELHKTLEEQKLS
                     SDERQKQNELQGLLCGCLQVIIQKLGSSDQTKYIFMQYADQIMNLFLRVFACRSATVH
                     EEAMLAIGALAYSVGPDFAKYMPEFYKYLEMGLQNFEEYQVCAVTVGVVGDICRALED
                     KVLPWCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQS
                     AAELSSHTAGADDEMIEYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHIIQFLD
                     LIYMEKDMDDVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSKDFLNECLSSDDHLIKE
                     SAEWAKLAISRAISV"
     misc_feature    152..2761
                     /gene="LOC139839868"
                     /note="Karyopherin (importin) beta [Intracellular
                     trafficking and secretion]; Region: KAP95; COG5215"
                     /db_xref="CDD:227540"
     misc_feature    425..502
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    order(476..481,488..490,497..502,593..598,605..607,
                     614..619,626..628,728..733,752..754,761..766,773..775,
                     857..862,869..871,878..883,980..985,992..994,1001..1006)
                     /gene="LOC139839868"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    542..628
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    668..778
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    803..883
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    920..1009
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1112..1213
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    order(1187..1192,1199..1201,1208..1213,1301..1306,
                     1313..1315,1322..1327,1334..1336,1430..1435,1442..1444,
                     1451..1456,1463..1465,1571..1576,1583..1585,1592..1597,
                     1718..1723,1730..1732,1739..1744)
                     /gene="LOC139839868"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    1250..1336
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1373..1468
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1520..1597
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1649..1747
                     /gene="LOC139839868"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     polyA_site      3679
                     /gene="LOC139839868"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggtattcatt cgcagtttct gttctctctc tccccctttc cgtctagggt ttccagaacc
       61 gccgtttttt tggtcgcttg ttcgcttatc aggaactgtt tatcactaaa tattcagatt
      121 gttgaaaaaa gtgctcaggc aagtattaat ggcgatggaa gttacgcaaa ttctgttgaa
      181 tgcgcaatca gttgatggat ctgttaggaa gcatgctgaa gatagtttaa agcagtttca
      241 ggagcaaaac gttgctggtt ttctgttatc tttgtctggt gaacttgcta gtgaggacaa
      301 gcctgttgat agtcgtaaat tggctggttt aatccttaag aacgcattag atgcgaaaga
      361 gcaacataga aagtatgagc ttgttcaaag atggttatcg ctagacgtgg gtgttaagac
      421 acagataaag acatgtttgt tgcaaacact ctcgtcttct gtctacgagg cacgatcgac
      481 tgcatcacaa gtgatagcta aagttgctgg tattgagcta ccacagaaac aatggcctga
      541 gctgattggt tcactcttat cgaatattca tcaggctcct gttcatatta agcaagcgac
      601 tctcgaaacg cttggatata tgtgtgaaga ggtttcaccc gatgttgtag aacaagagca
      661 ggtgaataaa atacttactg ctgttgttca aggtatgaat ccatctgaag gtaataatga
      721 tgtcaggctt gctgctacac gggcattgta caatgctctt agttttgctc aggcgaattt
      781 ttctaacgat atggagcgag attacattat gaaggttgtt tgtgaggcga ctttgtcacc
      841 agaagtgaaa attaggcagg cagcttttga atgtttggtg tccatctcat caagttacta
      901 tgagaaaata tctccataca tgcaggatat ttttgccatt acagctaaag cagtgaaaga
      961 agatgaagag cctgttgcct tacaagctat tgaattttgg agttcaatat gtgatgaaga
     1021 gattgatata ttggaggatt atggggttga ttttactgct gattcagaag ttccttgctt
     1081 ttatttcatc aagcaggctt tgcctgcact tgtgcccatg ttgttggaga cattgttaaa
     1141 gcaagaagaa gatcaagatc aagatgaagg tgcttggaat cttgccatgg ctgggggtac
     1201 atgtcttggt ttggttgcaa gaacagttgg agatgatatt gttcaacttg tgatgccttt
     1261 tattgaagag aatataacaa aacccgattg gaggcaaagg gaaggggcta cttatgcctt
     1321 tggttcaatc ttggagggtc cgtcacctaa taacttgact ccacttgtta atgttgctct
     1381 taacttcatg ctcacagctc taaacaaaga cccaaacaac catgtaaaag acacaactgc
     1441 ttggacttta ggaagaatat ttgagtttct tcatgggtca actatggaga cacctattgt
     1501 tacccctgct aactgccagc agattattac agtacttcta cagagcatga aggatgctcc
     1561 taatgttgct gagaaatcat gtggggccct ttattttctc gctcaaggtt ttgaagatat
     1621 tggtcaatcg tctcctttga ctcccttttt ccaagaaatt gttcaatctc ttctgacagt
     1681 cactcataga gaagatgctg gtgagtctag gttaagaact gctgcttatg agtcactaaa
     1741 tgaagttgtg aggtgctcaa cagatgaaac agctcccatg gtgttgcagc ttgttccagt
     1801 catcatgatg gaacttcata aaactcttga agaacaaaag ctttcgtctg atgagagaca
     1861 aaaacagaac gagttgcaag gccttctttg tgggtgcttg caggttatca ttcagaaact
     1921 aggatcatct gatcaaacta agtacatctt catgcagtat gcagatcaaa tcatgaatct
     1981 tttcctcagg gtttttgctt gtcgaagtgc aactgttcac gaagaggcaa tgcttgccat
     2041 aggagccctt gcttattcag tgggcccaga cttcgcaaag tatatgcccg agttttacaa
     2101 gtatcttgaa atgggtcttc agaactttga agagtaccaa gtgtgtgctg tgactgtagg
     2161 tgtggtgggt gacatatgca gggccttgga agacaaagtg ttgccatggt gtgatgggat
     2221 catgactcag cttcttaaag atttgtcgag taatcagttg catcgatcag tgaaaccacc
     2281 aatcttttca tgttttggtg atattgcact tgcaatagga gagaatttcg agaaatactt
     2341 gatgtatgct atgcctatgc ttcagagtgc agcagagtta tcctcccata cagcaggtgc
     2401 tgatgatgaa atgattgagt acaccaatct tttgagaaat ggcatattgg aggcatattc
     2461 tgggatcttt cagggtttca agaactctcc taaaactcag ttgctaattc cttacgcccc
     2521 acacattatc cagttccttg acctgatata tatggagaaa gacatggatg atgttgtgat
     2581 gaaaactgcc attggagtcc taggagatct agctgataca ctaggaagta atgctgggtc
     2641 cttgattcag caatctcttt caagcaaaga cttcttgaac gagtgtctgt catctgatga
     2701 tcatttgatt aaggaatccg ctgaatgggc caagttggcc attagtcgtg ctatttctgt
     2761 ttgattcttc tgcttttggt acatactttt gtctttttta tttggaagtc cctgcatgca
     2821 tatgggtcag tcgagtccgg ttccatcttt caggtcaggt catgtcacat attgtcatgt
     2881 cgttatgatg gggatttctg gggcgtcatg atgatgtcat ctatgcagct ttttcaagag
     2941 ttctctgttt gaatctccag aagatctcat tttgttctgg tggtgccttt ggttgtcaaa
     3001 attaattggt caatttcgag tcttgcatcg gtcctaccta tttgtgacag ctgggactac
     3061 tatcttccat ttgttctgct atatatactc gagtcgggtt ggggcttgca tacaatttac
     3121 tttttaagga aaatcattac agcgccattc acattttttt tttcttttac ctcgttcgtt
     3181 tccttttttt catattttga aattctttca tttggaagaa acatttttga gtcatgcatc
     3241 agtccgggtc gtcagtgtcc tgtttaccaa agtcggattg cgtctttttt tcttttcttt
     3301 tcttctactt catatctcaa agaagggttc agtcactatg tattcaagca tttctcaagt
     3361 caaaaggtgt tttgatttgt tggtcaaagt tgaagtactc cataaatatg ctgcgtcatc
     3421 ttttcatgtc gcggaacatg gaaatcctat tttgataaga atggtgtgcg tcacaacttg
     3481 tgatgatgaa attgaaatac gatttgtagg atgtttgttg gttggaggta ggggcattca
     3541 ttttgtaaaa tttgccgcat ctgttatttt ttgggctcta aactgcaaac tgaaacttca
     3601 ccatcctgta tggatttgtg tcaattaaag agttctattg tgtaattgct tttttccctt
     3661 aaatttattt gttatttta
//
LOCUS       XR_011757128            1967 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839869), transcript variant X1, ncRNA.
ACCESSION   XR_011757128
VERSION     XR_011757128.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1967
                     /gene="LOC139839869"
                     /note="uncharacterized LOC139839869; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839869"
     ncRNA           1..1967
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839869"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839869"
ORIGIN      
        1 aaccctaacc ctaatttcta aattcggttt acacaacttt gaagatcgat aaatttttcc
       61 cctctccctc gccgtcgaaa ccctaaccct aatttctaaa ttcgttaaaa ccgcgagaga
      121 tttgtttaat ccggttgttt agatcgttac ttggtctaat aaactcatta atatcatctt
      181 taaataaact catggaatcg aagatgtctc ggtgcttttc gtatcgtctt cctggtcatt
      241 ggagcaagag taatggctcc cttctcaact tttcaggtca atggtgagga tctggcggaa
      301 atctcaggtg gagaggtagc atatacaaat ctaagctcca gaattcatgt tacaacttcg
      361 ttttcaatta aatcatgaaa gagcttctac aacaagtagt ccagggttgc ttctattatc
      421 tattatatat attatattac taagtttaat aacacacttt agtatgaatg tctaaattta
      481 tgtgacacag ttgattgttg aatttaggat gctttttact attttatcct ctggcacttt
      541 atataatagg gtaaagagag cattgcgact cttctcgaat cattaaaaaa agaaggatat
      601 gattgcagag aagaatttga aagcttcatg ttccttgtag atggttaggt cgtctactgc
      661 cacatgctcg ttgggtaagt tgactcggca aaaaaaggga gaaattacaa gttttaaaga
      721 gaagctgcat gagataaatg ctttattggt atgcaaaata cgagtacttt ttttgggata
      781 aatgctttat tgagacctag actgatgctt gtttctgccc aacacactct tcaaggtgcg
      841 aatgatgttt gctatcgaag ttattcaaag cagatgtaaa cggactttaa tgtgtgaaat
      901 cagtctgaag aaagaagcag aaaagaatcg tcatcagaaa aataggtgga aagtcaacaa
      961 aaatgttaaa gtcaaagaca tcggtgaatc gtgcgtaccg tgtggtttgg acgatctgtt
     1021 aaggtaatac tttgatttac gttttggtgg aactgattct ttgatttttg ttgaaactgt
     1081 aaataataat tttcagatta tggtttttat tatatgtttt atagtcaaat aataagttac
     1141 agtattttta gaattgcttg tctaaccatt atgacttgaa ctcatatgaa tgatgaatca
     1201 gttcatattt gtttaaataa agaaattatt atgattataa ccttatttag ttctcaaata
     1261 atcagatttg gataattagt accattacag atgcttatcg cacgtgtaca aattatcgcc
     1321 taattttccc ttcctgcttt ttcttacaat ctaaccccag ttaacaatgt cattcttttt
     1381 tttttaaaaa gtcccctaca taacttagtt atcttttgaa taatatgtaa taataataac
     1441 tgttatacat ttaaaaagta gagacattca acttcagtat agctcatttc gttgcaactg
     1501 tgtgatactg attgtactac gatctagtct ataagtataa atgactatct gattctgatg
     1561 agagtatttc aaaaatactt tttgaaaaac tttggtcaaa tgatatgcat gatttcatac
     1621 acaacaactc tacattggac gaggccgaaa acttgcagga catgagcaag ggtgagatac
     1681 cttagaaaca acaaggacgt ttccggattt tgtttcgtgg ttcaccgaga tacgaattaa
     1741 gcaagtcttt tgggaaggtt tttgagtttg actcttgtgg gtgctggttt attacttagt
     1801 tggacattgg gttggttgtt tagatgattt gttggttacc tgaacttgtt tctatttgta
     1861 aatcacatgt ttttaggagt aagttttaat ctttattcaa attcaaattc aaattgcatc
     1921 tggtatagat catatatgtt catattgcat aaaggttttt aagattt
//
LOCUS       XR_011757129            1329 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839869), transcript variant X2, ncRNA.
ACCESSION   XR_011757129
VERSION     XR_011757129.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1329
                     /gene="LOC139839869"
                     /note="uncharacterized LOC139839869; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839869"
     ncRNA           1..1329
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839869"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839869"
ORIGIN      
        1 aaccctaacc ctaatttcta aattcggttt acacaacttt gaagatcgat aaatttttcc
       61 cctctccctc gccgtcgaaa ccctaaccct aatttctaaa ttcgttaaaa ccgcgagaga
      121 tttgtttaat ccggttgttt agatcgttac ttggtctaat aaactcatta atatcatctt
      181 taaataaact catggaatcg aagatgtctc ggtgcttttc gtatcgtctt cctggtcatt
      241 ggagcaagag taatggctcc cttctcaact tttcaggtca atggtgagga tctggcggaa
      301 atctcaggtg gagaggtagc atatacaaat ctaagctcca gaattcatgt tacaacttcg
      361 ttttcaatta aatcatgaaa gagcttctac aacaagtagt ccagggttgc ttctattatc
      421 tattatatat attatattac taagtttaat aacacacttt agtatgaatg tctaaattta
      481 tgtgacacag ttgattgttg aatttaggat gctttttact attttatcct ctggcacttt
      541 atataatagg gtaaagagag cattgcgact cttctcgaat cattaaaaaa agaaggatat
      601 gattgcagag aagaatttga aagcttcatg ttccttgtag atggttaggt cgtctactgc
      661 cacatgctcg ttgggtaagt tgactcggca aaaaaaggga gaaattacaa gttttaaaga
      721 gaagctgcat gagataaatg ctttattggt atgcaaaata cgagtacttt ttttgggata
      781 aatgctttat tgagacctag actgatgctt gtttctgccc aacacactct tcaaggtgcg
      841 aatgatgttt gctatcgaag ttattcaaag cagatgtaaa cggactttaa tgtgtgaaat
      901 cagtctgaag aaagaagcag aaaagaatcg tcatcagaaa aataggtgga aagtcaacaa
      961 aaatgttaaa gtcaaagaca tcggtgaatc gtgcgtaccg tgtggtttgg acgatctgtt
     1021 aaggacatga gcaagggtga gataccttag aaacaacaag gacgtttccg gattttgttt
     1081 cgtggttcac cgagatacga attaagcaag tcttttggga aggtttttga gtttgactct
     1141 tgtgggtgct ggtttattac ttagttggac attgggttgg ttgtttagat gatttgttgg
     1201 ttacctgaac ttgtttctat ttgtaaatca catgttttta ggagtaagtt ttaatcttta
     1261 ttcaaattca aattcaaatt gcatctggta tagatcatat atgttcatat tgcataaagg
     1321 tttttaaga
//
LOCUS       XR_011757130            1824 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839869), transcript variant X3, ncRNA.
ACCESSION   XR_011757130
VERSION     XR_011757130.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1824
                     /gene="LOC139839869"
                     /note="uncharacterized LOC139839869; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839869"
     ncRNA           1..1824
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839869"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839869"
ORIGIN      
        1 aaccctaacc ctaatttcta aattcggttt acacaacttt gaagatcgat aaatttttcc
       61 cctctccctc gccgtcgaaa ccctaaccct aatttctaaa ttcgttaaaa ccgcgagaga
      121 tttgtttaat ccggttgttt agatcgttac ttggtctaat aaactcatta atatcatctt
      181 taaataaact catggaatcg aagatgtctc ggtgcttttc gtatcgtctt cctggtcatt
      241 ggagcaagag taatggctcc cttctcaact tttcaggtca atggtgagga tctggcggaa
      301 atctcaggtg gagaggtagc atatacaaat ctaagctcca gaattcatgt tacaacttcg
      361 ttttcaatta aatcatgaaa gagcttctac aacaagtagt ccaggggtaa agagagcatt
      421 gcgactcttc tcgaatcatt aaaaaaagaa ggatatgatt gcagagaaga atttgaaagc
      481 ttcatgttcc ttgtagatgg ttaggtcgtc tactgccaca tgctcgttgg gtaagttgac
      541 tcggcaaaaa aagggagaaa ttacaagttt taaagagaag ctgcatgaga taaatgcttt
      601 attggtatgc aaaatacgag tacttttttt gggataaatg ctttattgag acctagactg
      661 atgcttgttt ctgcccaaca cactcttcaa ggtgcgaatg atgtttgcta tcgaagttat
      721 tcaaagcaga tgtaaacgga ctttaatgtg tgaaatcagt ctgaagaaag aagcagaaaa
      781 gaatcgtcat cagaaaaata ggtggaaagt caacaaaaat gttaaagtca aagacatcgg
      841 tgaatcgtgc gtaccgtgtg gtttggacga tctgttaagg taatactttg atttacgttt
      901 tggtggaact gattctttga tttttgttga aactgtaaat aataattttc agattatggt
      961 ttttattata tgttttatag tcaaataata agttacagta tttttagaat tgcttgtcta
     1021 accattatga cttgaactca tatgaatgat gaatcagttc atatttgttt aaataaagaa
     1081 attattatga ttataacctt atttagttct caaataatca gatttggata attagtacca
     1141 ttacagatgc ttatcgcacg tgtacaaatt atcgcctaat tttcccttcc tgctttttct
     1201 tacaatctaa ccccagttaa caatgtcatt cttttttttt taaaaagtcc cctacataac
     1261 ttagttatct tttgaataat atgtaataat aataactgtt atacatttaa aaagtagaga
     1321 cattcaactt cagtatagct catttcgttg caactgtgtg atactgattg tactacgatc
     1381 tagtctataa gtataaatga ctatctgatt ctgatgagag tatttcaaaa atactttttg
     1441 aaaaactttg gtcaaatgat atgcatgatt tcatacacaa caactctaca ttggacgagg
     1501 ccgaaaactt gcaggacatg agcaagggtg agatacctta gaaacaacaa ggacgtttcc
     1561 ggattttgtt tcgtggttca ccgagatacg aattaagcaa gtcttttggg aaggtttttg
     1621 agtttgactc ttgtgggtgc tggtttatta cttagttgga cattgggttg gttgtttaga
     1681 tgatttgttg gttacctgaa cttgtttcta tttgtaaatc acatgttttt aggagtaagt
     1741 tttaatcttt attcaaattc aaattcaaat tgcatctggt atagatcata tatgttcata
     1801 ttgcataaag gtttttaaga tttg
//
LOCUS       XM_071830068            2285 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase-like
            (LOC139839870), mRNA.
ACCESSION   XM_071830068
VERSION     XM_071830068.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-168               JBITNF010000004.1  642355702-642355869
            169-264             JBITNF010000004.1  642356150-642356245
            265-377             JBITNF010000004.1  642356351-642356463
            378-444             JBITNF010000004.1  642356731-642356797
            445-537             JBITNF010000004.1  642356888-642356980
            538-681             JBITNF010000004.1  642357074-642357217
            682-770             JBITNF010000004.1  642370795-642370883
            771-876             JBITNF010000004.1  642370978-642371083
            877-964             JBITNF010000004.1  642371167-642371254
            965-1083            JBITNF010000004.1  642371352-642371470
            1084-1248           JBITNF010000004.1  642371566-642371730
            1249-1427           JBITNF010000004.1  642371851-642372029
            1428-1525           JBITNF010000004.1  642372135-642372232
            1526-1635           JBITNF010000004.1  642372518-642372627
            1636-1746           JBITNF010000004.1  642372735-642372845
            1747-1857           JBITNF010000004.1  642373252-642373362
            1858-1887           JBITNF010000004.1  642373571-642373600
            1888-2063           JBITNF010000004.1  642373602-642373777
            2064-2285           JBITNF010000004.1  642373881-642374102
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2285
                     /gene="LOC139839870"
                     /note="beta-galactosidase-like; The sequence of the model
                     RefSeq transcript was modified relative to its source
                     genomic sequence to represent the inferred CDS: deleted 1
                     base in 1 codon; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 92 Proteins"
                     /db_xref="GeneID:139839870"
     CDS             1..2172
                     /gene="LOC139839870"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: beta-galactosidase-like"
                     /protein_id="XP_071686169.1"
                     /db_xref="GeneID:139839870"
                     /translation="MWRMPRIKILLLLVIFSCICSSINATVSYDDKAIIINGRRRILM
                     SGSIHYPRSTPEMWPDLIKKAKDGGLDVIQTYVFWNGHEPSPGKYNFEGRYDLVKFIK
                     YIQEAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKIAMQGFTTKIVN
                     MMKSAELFEPQGGPIIMSQIENEYGPVEWDIGAPGKAYSKWAAKMADGLKTGVPWIMC
                     KQEDAPDPMIDTCNGFYCEKFTPNRPYKPKMFTELWTGWFTEFGGPIPTRPVEDIAYS
                     VARFIQNNGSFVNYYMYHGGTNFGRTAGGLFITTSYDYDAPIDEYGLLNEPKWGHLRD
                     LHTTIKLVEPALVSAYPTVIYPGKNQEIHVFQPKTGSCAAFLSNYDPHFSAKLMFRNV
                     QYNLPPWSISILHDCKNEVFNTAKVKASSTQKKMTVVETFKWESYNEEAPTSDSGDGD
                     TLSMEGLYEQLNVTRDASDYLWYLADINEHFLKNGQFPTLTVMSAGHALHVFINNQLS
                     GTVWGSLKNPKLTFSQKVKLRAGVNKISLLSVSVGLSNVGTHYETYNVGVLGPITLKG
                     LNEGTQDLMKHKWSYKVGLRGESLSLHTLDGSSSVEWLQGSLVAQKQPLTWYKTTFNA
                     PEGNEPLALDMNSMGKGQIFLNGEGLGRHWPGNKAHGNCNKCSYTGIYNENKCNQYCG
                     DPSQRWYHVPRSWLRPTGNFLVIFEEWGGNPDWITLVKRTT"
     misc_feature    19..2169
                     /gene="LOC139839870"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
ORIGIN      
        1 atgtggagaa tgcccagaat caaaatacta ttgttacttg ttatattttc ttgtatttgt
       61 tcatctataa atgcaactgt atcttatgat gataaagcca tcatcatcaa tggcagaaga
      121 agaatcctca tgtctggttc aattcattac ccaagaagca cccctgagat gtggccagac
      181 cttataaaaa aggccaaaga tggtggcttg gatgtcatac aaacttatgt attttggaat
      241 ggacatgaac catctcctgg gaagtacaat tttgagggga ggtatgattt ggtcaagttc
      301 ataaaatata tacaagaagc aggcctttat gttcatctgc gcatcggccc ttatgtttgt
      361 gctgaatgga attttggggg attccctgtt tggcttaaat atgtacccgg gatatctttt
      421 cgaacagaca acggaccttt caagattgcg atgcaaggat ttacgacaaa aatagtcaac
      481 atgatgaaat cagcggaatt atttgaacct caaggaggtc caattatcat gtctcagata
      541 gaaaacgagt acggtccagt tgaatgggat atcggtgcgc caggaaaagc ttactctaaa
      601 tgggctgcaa aaatggctga tggtctaaaa accggcgtcc catggatcat gtgcaaacaa
      661 gaagatgccc ctgatccaat gattgataca tgtaatggtt tctactgtga gaaattcact
      721 cctaacaggc catacaaacc taaaatgttt acagaacttt ggactggctg gttcacggaa
      781 tttggtggcc caattcctac cagacctgta gaagatatag catattcagt tgcaaggttc
      841 atacagaata acggctcttt tgttaattac tacatgtatc acggaggaac aaattttggg
      901 cgcacagcag gaggtctctt cattactacg agttatgatt atgatgctcc catagatgaa
      961 tatggattac tgaatgagcc caaatggggc catttaaggg atttacacac aaccattaaa
     1021 ctagttgagc ctgctttagt ttcagcttat cctactgtta tatatcctgg aaagaatcaa
     1081 gagatacatg tatttcaacc gaaaactggg agttgtgctg catttctctc gaactatgat
     1141 ccacattttt cagcaaaatt gatgtttaga aatgtacaat ataacctccc tccttggtca
     1201 attagcattc ttcatgactg taaaaacgaa gtattcaaca ccgcaaaggt taaagcttca
     1261 agcacacaaa aaaagatgac agttgttgag accttcaagt gggaatcata caatgaagaa
     1321 gctccaactt ctgatagtgg tgatggtgat actctttcca tggaagggtt atatgagcag
     1381 ttaaatgtta caagagatgc atctgactac ttgtggtacc ttgcagacat aaatgaacat
     1441 tttttgaaga atgggcagtt ccctacactc acagttatgt cagcagggca tgctttgcat
     1501 gtttttatca acaatcaact gtcaggaaca gtctggggat cactcaaaaa tccaaagttg
     1561 actttcagtc aaaaagtaaa gttgagagca ggtgttaaca agatctcttt gctaagtgtt
     1621 tctgtgggac tttcgaatgt cggcacacac tatgagacgt acaacgtggg ggtactaggg
     1681 ccaattacct tgaaaggtct aaatgagggt acacaagact tgatgaagca taaatggtct
     1741 tataaggttg ggttaagagg tgaaagtttg agtctccata cactcgatgg aagttcctct
     1801 gttgagtggc tacaaggatc cttggtggct caaaagcaac ctcttacttg gtacaagact
     1861 acgttcaatg ctcctgaagg aaatgaacca ctagctttag atatgaacag catgggaaaa
     1921 ggtcagatat ttctcaacgg agaagggctc gggagacact ggcccggaaa caaagctcat
     1981 ggtaactgta ataaatgcag ttacacaggg atctacaatg aaaataaatg caaccaatat
     2041 tgtggagatc cttctcaaag atggtatcat gttccccgct catggttaag gccaaccggt
     2101 aacttcttgg ttatcttcga ggaatgggga ggcaacccag attggattac tttagtcaaa
     2161 agaacaactt aaaatcagta tcagttacac ctctcaatgg atatcatagt agtaaataca
     2221 cgtaaagaag atatataaaa aggatgaaaa taatgctatt ggttactatg ggcagtggac
     2281 atgta
//
LOCUS       XR_011757131             288 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839871), ncRNA.
ACCESSION   XR_011757131
VERSION     XR_011757131.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..288
                     /gene="LOC139839871"
                     /note="uncharacterized LOC139839871; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839871"
     ncRNA           1..288
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839871"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839871"
ORIGIN      
        1 ctgaaatctg atttcgtgga ggcgatgctt tagtaagttg tttgaaaaaa cagttatatg
       61 catcgaacgg tacatccacg caggaaggtg ctaaacagcc attgtgttct atatttaatg
      121 atgactgaat tggtgatgga tttggttaaa gatgacttgg tctataccaa aaatgtagag
      181 aagcttaata aaggcaatgg ttggatgctg accaacaatg agataatact ccttattttt
      241 tcgatattat tgcctatttt gttattgaat gcattcagtg tttcaaaa
//
LOCUS       XM_071830069            1184 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839872), mRNA.
ACCESSION   XM_071830069
VERSION     XM_071830069.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1184
                     /gene="LOC139839872"
                     /note="uncharacterized LOC139839872; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839872"
     CDS             59..1042
                     /gene="LOC139839872"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686170.1"
                     /db_xref="GeneID:139839872"
                     /translation="METLIINNYHFTPSNFAVTTKTHSVSHFHLKQVLQIRQLSNCIR
                     NQVTPTKMAAADASSGHLQQIPGVNQQRIIIENKHGEKLMGVLHETGSTDIVILCHGF
                     QSSKESSTVMTLASALEKEGISAFRFDFAGNGESEGSFQYGNYRREADDLRSVVQYFH
                     GENRVTSAILGHSKGGNVVLLYASKYHDVHRVINVSGRYKTEGGVEERLGTGYLQRVK
                     KDGFIDVKSKSGEVSYRVTEESLMDRLNTNMHEACLQIDKDCKVLTVHGSNDEVVRVE
                     EALGFAKIISNHKLHIIEGANHRYSEHRDELTSIVLSFIKEPHSSYNQDNV"
     misc_feature    254..1009
                     /gene="LOC139839872"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; Region:
                     FrsA; COG1073"
                     /db_xref="CDD:440691"
ORIGIN      
        1 taaaactgcc aaaatcaggg tcacatgcaa caaaacagca caacacaatt atccaaccat
       61 ggaaactcta ataatcaata attatcattt taccccctcc aattttgcag ttacaaccaa
      121 aacacattct gtatctcatt ttcatctcaa acaggtactg caaatcagac aactaagcaa
      181 ttgcatccgt aaccaggtaa cacctactaa aatggccgcc gctgatgcca gttccggcca
      241 tcttcagcaa ataccaggag ttaatcaaca gaggataatt atagaaaaca aacatggaga
      301 gaaacttatg ggtgtcttac atgaaactgg atccacagat attgtgattc tgtgtcatgg
      361 atttcaatca tcaaaggaaa gcagtaccgt tatgacactt gcttctgcac tagagaagga
      421 ggggatcagt gcatttcgct tcgattttgc tgggaatggg gagagtgagg gctcttttca
      481 atatggtaat tatcggagag aggctgatga cttacgttcg gtagtccaat attttcatgg
      541 agaaaatcgt gtaacaagtg caattcttgg acatagcaaa ggaggaaatg tggtgctttt
      601 atacgcgtcc aagtatcatg acgtacaccg tgtcatcaat gtgtctggac gctacaagac
      661 agaggggggt gtggaagagc gtttgggaac agggtatttg caaagagtga aaaaagatgg
      721 ttttatcgat gttaaatcca aatcaggaga ggtctcatat cgtgtgacag aagaaagttt
      781 gatggatcgt ttgaatacta atatgcacga agcatgtctg caaattgaca aagattgcaa
      841 ggtgttaaca gttcatggat cgaatgatga ggtagtccga gtagaagagg cgttggggtt
      901 tgctaaaatc atatcgaacc acaagcttca tattattgaa ggtgccaacc acagatactc
      961 ggagcatcga gatgaattaa cttccattgt tttgtctttc ataaaagaac ctcacagtag
     1021 ttacaaccaa gacaatgtat aaaggtagtt gatgtagatc caatttctga aagtcaataa
     1081 gttttttgtt tcattctaat tctccacact tttcaaggag gttgatcctg catttgtagc
     1141 catgcacttg aggtgttcac atatttagct ttaaagcgta tcta
//
LOCUS       XM_071830070            3752 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable pre-mRNA-splicing
            factor ATP-dependent RNA helicase DEAH5 (LOC139839873), mRNA.
ACCESSION   XM_071830070
VERSION     XM_071830070.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3752
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3752
                     /gene="LOC139839873"
                     /note="probable pre-mRNA-splicing factor ATP-dependent RNA
                     helicase DEAH5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 29 Proteins"
                     /db_xref="GeneID:139839873"
     CDS             60..3608
                     /gene="LOC139839873"
                     /codon_start=1
                     /product="probable pre-mRNA-splicing factor ATP-dependent
                     RNA helicase DEAH5"
                     /protein_id="XP_071686171.1"
                     /db_xref="GeneID:139839873"
                     /translation="MVSQTKEPSLKEIEYRSLVYKVRTELKSHLGFDKKVLAKFIISI
                     GQQCETIDEFDAKLKENGAEMPDYFVRTLLTIIHAILPPKSKSGSGKDASKDTDDGSK
                     SSFPALKIGDSRDRVKALEKEIELEAQQKKIRNEKNEYDDDEPRSHRGGRNDRDSGRY
                     ERRRGDKDDRGTHGGNDRDRDRYRDRDRDRYRDRDRGRDRDDKYETGDRKGYYSHKSN
                     EPELYQVYKGRVSKVMDTGCFVQLIDIKGKEGLVHVSQMATRRIANAKDVVKRDQEVF
                     VKVISISGQKLSLSMRDVDQTTGRDLLPLKKSADDNDDDNDVRTNPSGGSKYGGSLSR
                     TGLSGITLTEEDVGVPSRRPLKRMTSPERWEANQLIASGVLSVKEYPMFDEETNEGMM
                     YQEEGGDEELEVELNEDEPAFLQGQSHYSMDMSPVKIFKNPEGSLSRAAALQSALIKE
                     RREVRDQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDSY
                     GKALTFGQRSKLSLQEQRQSLPIYKLKKELVQAVNDNQVLVVIGETGSGKTTQVTQYL
                     AEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYSIRFEDCTCPETVIKY
                     MTDGMLLREILVDENLSQYSVIMLDEAHERTMHTDVLFGLLKGLVKRRPDLRLIVTSA
                     TLDAEKFSSYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVMQIHLTEPEGDI
                     LVFLTGQEEIDHACQCLFERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK
                     VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG
                     RTGPGKCYRLYTESAFNNEMSPTSIPEIQRINLGLITLNLKAMGINDLLSFDFMDPPS
                     PQALISALEQLYTLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTI
                     IAMITTGNIFYRPREKQAQADQRKAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF
                     VQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGY
                     RTIVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREATVVDPKWLVELAPRFFK
                     VSDPTKMSKRKRQERIEPLYDRYNEPNSWRLSKRRA"
     misc_feature    99..299
                     /gene="LOC139839873"
                     /note="GIPC-homology 2 (GH2)-like domain found in DEAH box
                     protein 8 (DHX8) and similar proteins; Region:
                     GH2-like_DHX8; cd21691"
                     /db_xref="CDD:409668"
     misc_feature    726..956
                     /gene="LOC139839873"
                     /note="The N-terminal S1 domain of human ATP-dependent RNA
                     helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide.
                     The DEAH-box RNA helicases are thought to play key roles
                     in pre-mRNA splicing and DHX8 facilitates nuclear export
                     of spliced mRNA by releasing...; Region: S1_DHX8_helicase;
                     cd05684"
                     /db_xref="CDD:240189"
     misc_feature    order(750..752,774..776,810..812,816..818)
                     /gene="LOC139839873"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:240189"
     misc_feature    1641..>3512
                     /gene="LOC139839873"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; Region: HrpA; COG1643"
                     /db_xref="CDD:441249"
     polyA_site      3752
                     /gene="LOC139839873"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatttcaggt atttcccaaa ccttctaagt tttgtttgtt ctctaaaccc tagctatcaa
       61 tggtttctca aactaaagaa cccagtttga aagaaatcga gtatcgctcc ctcgtatata
      121 aagttcgcac agaactcaaa tcccatctag ggtttgataa aaaagtttta gccaaattca
      181 ttatatccat aggtcaacag tgtgaaacta ttgacgaatt cgatgctaag ttgaaagaaa
      241 atggtgctga gatgcctgat tactttgttc gcactttact taccattatc cacgctattt
      301 tgcctccaaa atcaaaatcc ggatccggta aagatgctag taaggatacc gacgatggat
      361 caaaatcaag ctttcctgct ctgaagatag gcgatagtag agaccgtgtc aaggctttgg
      421 agaaggaaat tgaattggaa gcccaacaga agaagattag gaacgaaaaa aacgagtatg
      481 acgatgatga acccaggagt caccgtggtg gtcggaatga cagggatagc ggtagatatg
      541 agcgcagaag aggagataaa gatgatagag gaactcatgg tggaaatgat agggatagag
      601 atagatatag agatagagat agagatagat acagagatag agatagaggt cgagatcgag
      661 atgataaata tgaaacgggt gataggaagg gttattatag tcacaaatcc aatgagcctg
      721 aattatatca ggtctataaa gggagggtta gtaaagtaat ggacacgggc tgttttgttc
      781 agcttattga tatcaaggga aaagaaggtt tggtccatgt atcgcaaatg gcaacaagga
      841 gaatagcgaa tgccaaggat gtggttaaac gcgatcaaga ggttttcgtg aaagtgattt
      901 caatatctgg tcagaagtta tctctttcga tgagagatgt tgatcagact actgggagag
      961 atttgttgcc attgaagaag agtgcagatg ataatgatga cgataatgat gtaaggacta
     1021 atccttctgg tgggtcaaag tatggtggtt ctttatctag gacaggactt tcaggaataa
     1081 ctcttacgga agaggatgtt ggggttcctt caaggagacc gttgaagagg atgacttcac
     1141 cggagagatg ggaggcaaat cagttgattg cgtcaggggt tttgagtgtg aaagagtatc
     1201 caatgtttga tgaagaaact aatgaaggga tgatgtatca agaagaaggt ggtgatgagg
     1261 agcttgaggt cgagttaaat gaagatgaac ctgcatttct gcaagggcag agtcattact
     1321 ccatggatat gtccccagtc aagatattta aaaaccccga gggttcattg agtcgtgcag
     1381 cggctttgca gtctgctctt atcaaagaaa gaagagaggt tagggaccaa caacaaagaa
     1441 ccatgcttga ctcgatccct aaagatttga atcgaccgtg ggaagacccg atgccagagt
     1501 cgggtgagag acatttagca caagagctga ggggagttgg gctgtctgca tacgatatgc
     1561 ctgaatggaa aaaggattct tatggtaaag cattgacatt tggtcaaagg tcaaagcttt
     1621 cacttcagga acagagacag agcttgccta tctacaaatt gaagaaggaa ttggttcaag
     1681 ctgtgaatga taaccaggtt ttggttgtca ttggtgagac aggctctggg aagacaactc
     1741 aggtcacaca gtatctagcc gaagcaggtt acaccactcg gggtaagatt ggatgcacgc
     1801 agcctagaag ggtggctgca atgtctgtag ccaagagggt tgctgaagag ttcggttgtc
     1861 gtttgggtga ggaagttgga tactcgattc gttttgagga ttgtacctgt ccggaaacgg
     1921 ttatcaagta catgactgac ggtatgcttc taagggaaat attggttgat gaaaacctct
     1981 ctcagtattc agtgattatg cttgatgaag ctcatgagag aacaatgcat actgatgtac
     2041 ttttcgggtt attaaaaggc ctagtgaaac gaagacccga ccttcggtta atcgttactt
     2101 cggctacatt agatgctgag aagttttctt catatttctt taattgcaat attttcacaa
     2161 ttcctggaag gacatttccg gtggagatac tttacactaa acaacctgaa agcgattatc
     2221 tcgatgcagc tttaattact gtaatgcaga tccacttgac agaacctgag ggggacatac
     2281 ttgtgttttt gactggtcag gaagagatcg atcacgcttg ccagtgttta tttgagagaa
     2341 tgaaaggatt aggtaaaaat gttcctgagt tgatcatatt accggtttat agtgcactac
     2401 ctagtgaaat gcaatccagg atattcgaac ctgcgccgcc agggaagaga aaggtggttg
     2461 ttgccactaa tattgctgaa gcttctttga caatcgatgg gattttttat gtcattgatc
     2521 cgggcttcgc taagcaaaat gtgtataacc caaaacaagg tcttgattca cttgtcatta
     2581 ctccaatatc tcaggcatca gctaagcaac gggctgggcg tgcaggacgt acagggccgg
     2641 gaaagtgcta tagactatac actgaaagtg cctttaacaa tgaaatgtcg cctacctcaa
     2701 ttccagaaat acagaggata aatcttggat taataacatt aaatttgaaa gcgatgggga
     2761 taaatgatct gctgtctttt gatttcatgg accctccttc tcctcaggcc ctaatatctg
     2821 ctctcgaaca gctttacact cttggagctc ttgatgaaga aggtcttcta acaaaactgg
     2881 gtaggaaaat ggctgaattt cctctcgaac ctccgttgtc taagatgctc cttgcgagtg
     2941 ttgatttggg ttgcagtgat gagatattga ccataattgc aatgattacc acggggaaca
     3001 tcttttatag acctagggaa aaacaagccc aagcagatca aagaaaagca aagttttttc
     3061 aacctgaagg agatcatcta actttgcttg ctgtttacga ggcttggaaa gccaagaact
     3121 tttcagggcc atggtgcttc gagaatttcg ttcagtcaag atcacttagg agggcacaag
     3181 atgtcagaaa gcaactttta tccattatgg acaagtacaa gctggatgtt gtgagtgccg
     3241 ggaagaactt caccaagata cggaaggcaa tcacagctgg gtttttcttc catgctgcac
     3301 gcaaggaccc tcaagaggga tatcgtacca ttgttgagaa ccaaccggtt tacatacacc
     3361 caagtagtgc tctcttccaa aggcaaccgg attgggttat ctaccacgag ctagtgatga
     3421 caacaaaaga atacatgcgc gaggcgaccg ttgtggatcc aaagtggctt gtggaattgg
     3481 cacctaggtt ctttaaggtg tctgatccca ctaagatgtc taagcgtaaa agacaagaac
     3541 ggattgagcc tctatatgat aggtataacg aacccaattc gtggcgtttg agcaagcgac
     3601 gggcatgagc caattgcttc ttctggatga tgatgatgat tgtagtttgt tgttacacag
     3661 ttttgttgtc ttttttattt cttggtgact ataagctaat cttgtacctg aatttatcgc
     3721 atcatgttat gattatgcta ctaaattttc ga
//
LOCUS       XR_011757132            3394 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X1, ncRNA.
ACCESSION   XR_011757132
VERSION     XR_011757132.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3394
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..3394
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 tatccacgtg ggcctactgg tgcatcctca gccttatcgt tttttcaata attacaagaa
       61 aatgacaagc gaccttttta actatcgttt tttcaaaatt agggtttttt tccagatatt
      121 taccctaaat tgttatccag ttctcttatc aaccgttcaa tcgtgagaaa atcctacatc
      181 tgttcttcat ccgctcaatc ctttccctct ctaattaggg tttcaatttc ataatcggtg
      241 ttcaattcct catcaaattc acacacataa acagatgttc caattgcatg aaacatacaa
      301 tcaattgctt ttcgattatc acgatccaag cgtttatggt gatggaacga agatgaatca
      361 gaaatctgga ttagaattaa tgatattgtt actatgttga tggaacgaag aagaaggcga
      421 cgtaagtggt ggtttccgcc gttagtaacc attcttaatt aaacagatgt ttgatcattg
      481 cagtcttgga atgaaggatt catgggacct atgaagactc tggcggtccc aagtgttatc
      541 aaaggcattg gtaatgtggt tctgtgcttg acgggactac ggtattacca tagcagcatg
      601 ggcaacaatg gtgtcgtaga ctctcaagaa atcagacata aagtatgaac ttaagaacac
      661 tgatcaataa tggctaaaaa acattgtgga acatggctgg cctgacttac aaaaaggtaa
      721 atgtaactcc tcagttaacc tggtagttat gggtacatct tactcaagga acatggctgc
      781 aatctttcaa taaaaagttc actagaaaat ggaagatgac ttggtcattg ctgtttcgtt
      841 attcaatgtt agattcaaca cattgtttca ttagatgtat ttgtgaactt aactcatagt
      901 gaacttaact cataaaagag acattgtatt tgtggtctct gttcattaac tttaattgct
      961 aaaatgagtc tgaaagtaac gaattaacat tgttatgttt gggtctaaat gaccacttta
     1021 ctatagctgt agtttccttc agttcctttt tgacgtattt aggtttaagt gacccattac
     1081 agtataactg tgtacatggg ttttgttctc agttcctttt tttcgtgttt gagtctaaat
     1141 gacccaaagt aatataacta tgtacatggg tctaataata agatttgttc ttcatttagc
     1201 acatgatatg tgtttggttg ttgtttaata gcagctatat cggtcccttt catttttgtg
     1261 tttgggtctg aatgaccact gtattatagc gtgtgaatca ggggatccat cttggcatct
     1321 cttagtacgt tccagcaggt agggtttttt tgttctctta tttcttttga tcgggattca
     1381 gtgggtaatg ggtcaaaaca tgttattttt tggtacgatc tggggcgggc tggtgtagat
     1441 ccaaaacatt tcatgtttgc agttgtggtt attaattgtt agttagtcaa atacgagaat
     1501 catgttgaat ttttgactaa taaagatttt ggatctacaa caaggtcttg caatataaaa
     1561 atatcttata tcttaggtcg ctcttcattg ttgacttctc tcatgtgacg gactttcgtg
     1621 aagctacatg taggcagtat gaagaaaatg tatgcaatcg ttgtggatac ttcaatttca
     1681 tgcgattaat aaagatcgtc aggtcagttt gctattatac ccggttgtac tttttagaca
     1741 tgtttagacg tgtcttttat attttagtat gtgcttattg tgatctgaaa atactaatag
     1801 ttagatttat agtattggtt cataacaact ttgattcgaa ttaactgatt atagggggta
     1861 aaatagtaag ttttggataa ttataattat acgtgttgta gcaatgttga tttttaagag
     1921 attactaact actggtgcaa tagtagaagc atatagagca agggatccta gaatggctat
     1981 tgatcatggt caactataaa attcaaggga ataattattt caaaacaatt aaaagtttca
     2041 aataatataa atgcaactaa tatgtttatt aatatatcaa tgattaattt agtcataagt
     2101 gcttttaaag attatcatta aatagtttga tgattatatc cactttgaat gatacttaat
     2161 tattatatat caatatatgt taactgtagt atataaaaat gatactgtta tttgtgtctt
     2221 acaacttttg atctttatag tatgttttga atggactatg tgttatctga tgtttgaatg
     2281 aggttgaatg agtattatgt tactacttag aaggacataa tgtggtcatg gacattaaag
     2341 gctgattgaa gaatatgagg aggctactaa aacacgacta tgcaagtact tctacacaaa
     2401 tttcatatcc ttacattttg gtttgctttt tgaagttaag ccaatactaa ttatatatac
     2461 tgcttgagtt gttgatactt ttagttcaat gttgaggtgt atgggtaatg ggttttgggt
     2521 caaattgtgt ttgggtcaca taaagttttt tatggtgggt caacaatttc acatccaaat
     2581 gcccagacta taaacgggtc atgttgacca taattatatt ttaacgatta tttatatttc
     2641 attgcgataa agttaagtat tgtcaactgt ggggaatcaa tacttgaatc atgtttttag
     2701 tttcttgaat gacttttagt tatggtttta aactaatgac tgattttgta aaagttatgg
     2761 ataattgagc tgcctttcat taggaggttt tggtagtttt ggttatgttt tactcttttt
     2821 gggagttcaa gggttgatgg cgatgaggat gatgatggtg taagaagtaa gtcaggccca
     2881 atacacaccg gtgacaagca tgtcaactct gttctataca tcgatcccag acaaccagat
     2941 cctcttgaat tcgtgagaac gaaagtcaac taataggaac agatggatgt aagcgacttt
     3001 tatttgtgtg attgttgtta acgaatcaac tcatggctgg gtttcttgat atcgaattca
     3061 agcaattcaa caaaagattt ctatcggaat caattttaag aactgcgctt tgtcaattcg
     3121 aggttgaatg tttatgtcag gtcacttggc gctcttctcg attttgatgg ttataaagag
     3181 gcatatgtta caaatataac aaaagacgtt caatggcgta ttaaatgtat ataacacaca
     3241 caatgtgtac caacattaac gtatgagtat actaattttt taaagccatc gtataacgca
     3301 cgggctatta acatcatgat gatgtcttgg taaatgatgt ggaagaccca attggttcaa
     3361 ttatatcatc agtatatcca atttttttgg aaaa
//
LOCUS       XR_011757133            3403 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X2, ncRNA.
ACCESSION   XR_011757133
VERSION     XR_011757133.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3403
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..3403
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 atatccacgt gggcctactg gtgcatcctc agccttatcg ttttttcaat aattacaaga
       61 aaatgacaag cgaccttttt aactatcgtt ttttcaaaat tagggttttt ttccagatat
      121 ttaccctaaa ttgttatcca gttctcttat caaccgttca atcgtgagaa aatcctacat
      181 ctgttcttca tccgctcaat cctttccctc tctaattagg gtttcaattt cataatcggt
      241 gttcaattcc tcatcaaatt cacacacata aacagatgtt ccaattgcat gaaacataca
      301 atcaattgct tttcgattat cacgatccaa gcgtttatgg tgatggaacg aagatgaatc
      361 agaaatctgg attagaatta atgatattgt tactatgttg atggaacgaa gaagaaggcg
      421 acgtaagtgg tggtttccgc cgttagtaac cattcttaat taaacagatg tttgatcatt
      481 gcagtcttgg aatgaaggat tcatgggacc tatgaagact ctggcggtcc caagtgttat
      541 caaaggcatt ggtaatgtgg ttctgtgctt gacgggacta cggtattacc atagcagcat
      601 gggcaacaat ggtgtcgtag ctttgtagac tctcaagaaa tcagacataa agtatgaact
      661 taagaacact gatcaataat ggctaaaaaa cattgtggaa catggctggc ctgacttaca
      721 aaaaggtaaa tgtaactcct cagttaacct ggtagttatg ggtacatctt actcaaggaa
      781 catggctgca atctttcaat aaaaagttca ctagaaaatg gaagatgact tggtcattgc
      841 tgtttcgtta ttcaatgtta gattcaacac attgtttcat tagatgtatt tgtgaactta
      901 actcatagtg aacttaactc ataaaagaga cattgtattt gtggtctctg ttcattaact
      961 ttaattgcta aaatgagtct gaaagtaacg aattaacatt gttatgtttg ggtctaaatg
     1021 accactttac tatagctgta gtttccttca gttccttttt gacgtattta ggtttaagtg
     1081 acccattaca gtataactgt gtacatgggt tttgttctca gttccttttt ttcgtgtttg
     1141 agtctaaatg acccaaagta atataactat gtacatgggt ctaataataa gatttgttct
     1201 tcatttagca catgatatgt gtttggttgt tgtttaatag cagctatatc ggtccctttc
     1261 atttttgtgt ttgggtctga atgaccactg tattatagcg tgtgaatcag gggatccatc
     1321 ttggcatctc ttagtacgtt ccagcaggta gggttttttt gttctcttat ttcttttgat
     1381 cgggattcag tgggtaatgg gtcaaaacat gttatttttt ggtacgatct ggggcgggct
     1441 ggtgtagatc caaaacattt catgtttgca gttgtggtta ttaattgtta gttagtcaaa
     1501 tacgagaatc atgttgaatt tttgactaat aaagattttg gatctacaac aaggtcttgc
     1561 aatataaaaa tatcttatat cttaggtcgc tcttcattgt tgacttctct catgtgacgg
     1621 actttcgtga agctacatgt aggcagtatg aagaaaatgt atgcaatcgt tgtggatact
     1681 tcaatttcat gcgattaata aagatcgtca ggtcagtttg ctattatacc cggttgtact
     1741 ttttagacat gtttagacgt gtcttttata ttttagtatg tgcttattgt gatctgaaaa
     1801 tactaatagt tagatttata gtattggttc ataacaactt tgattcgaat taactgatta
     1861 tagggggtaa aatagtaagt tttggataat tataattata cgtgttgtag caatgttgat
     1921 ttttaagaga ttactaacta ctggtgcaat agtagaagca tatagagcaa gggatcctag
     1981 aatggctatt gatcatggtc aactataaaa ttcaagggaa taattatttc aaaacaatta
     2041 aaagtttcaa ataatataaa tgcaactaat atgtttatta atatatcaat gattaattta
     2101 gtcataagtg cttttaaaga ttatcattaa atagtttgat gattatatcc actttgaatg
     2161 atacttaatt attatatatc aatatatgtt aactgtagta tataaaaatg atactgttat
     2221 ttgtgtctta caacttttga tctttatagt atgttttgaa tggactatgt gttatctgat
     2281 gtttgaatga ggttgaatga gtattatgtt actacttaga aggacataat gtggtcatgg
     2341 acattaaagg ctgattgaag aatatgagga ggctactaaa acacgactat gcaagtactt
     2401 ctacacaaat ttcatatcct tacattttgg tttgcttttt gaagttaagc caatactaat
     2461 tatatatact gcttgagttg ttgatacttt tagttcaatg ttgaggtgta tgggtaatgg
     2521 gttttgggtc aaattgtgtt tgggtcacat aaagtttttt atggtgggtc aacaatttca
     2581 catccaaatg cccagactat aaacgggtca tgttgaccat aattatattt taacgattat
     2641 ttatatttca ttgcgataaa gttaagtatt gtcaactgtg gggaatcaat acttgaatca
     2701 tgtttttagt ttcttgaatg acttttagtt atggttttaa actaatgact gattttgtaa
     2761 aagttatgga taattgagct gcctttcatt aggaggtttt ggtagttttg gttatgtttt
     2821 actctttttg ggagttcaag ggttgatggc gatgaggatg atgatggtgt aagaagtaag
     2881 tcaggcccaa tacacaccgg tgacaagcat gtcaactctg ttctatacat cgatcccaga
     2941 caaccagatc ctcttgaatt cgtgagaacg aaagtcaact aataggaaca gatggatgta
     3001 agcgactttt atttgtgtga ttgttgttaa cgaatcaact catggctggg tttcttgata
     3061 tcgaattcaa gcaattcaac aaaagatttc tatcggaatc aattttaaga actgcgcttt
     3121 gtcaattcga ggttgaatgt ttatgtcagg tcacttggcg ctcttctcga ttttgatggt
     3181 tataaagagg catatgttac aaatataaca aaagacgttc aatggcgtat taaatgtata
     3241 taacacacac aatgtgtacc aacattaacg tatgagtata ctaatttttt aaagccatcg
     3301 tataacgcac gggctattaa catcatgatg atgtcttggt aaatgatgtg gaagacccaa
     3361 ttggttcaat tatatcatca gtatatccaa tttttttgga aaa
//
LOCUS       XR_011757134            2781 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X3, ncRNA.
ACCESSION   XR_011757134
VERSION     XR_011757134.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2781
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..2781
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 acgtgggcct actggtgcat cctcagcctt atcgtttttt caataattac aagaaaatga
       61 caagcgacct ttttaactat cgttttttca aaattagggt ttttttccag atatttaccc
      121 taaattgtta tccagttctc ttatcaaccg ttcaatcgtg agaaaatcct acatctgttc
      181 ttcatccgct caatcctttc cctctctaat tagggtttca atttcataat cggtgttcaa
      241 ttcctcatca aattcacaca cataaacaga tgttccaatt gcatgaaaca tacaatcaat
      301 tgcttttcga ttatcacgat ccaagcgttt atggtgatgg aacgaagatg aatcagaaat
      361 ctggattaga attaatgata ttgttactat gttgatggaa cgaagaagaa ggcgacgtaa
      421 gtggtggttt ccgccgttag taaccattct taattaaaca gatgtttgat cattgcagtc
      481 ttggaatgaa ggattcatgg gacctatgaa gactctggcg gtcccaagtg ttatcaaagg
      541 cattggtaat gtggttctgt gcttgacggg actacggtat taccatagca gcatgggcaa
      601 caatggtgtc gtagactctc aagaaatcag acataaagta tgaacttaag aacactgatc
      661 aataatggct aaaaaacatt gtggaacatg gctggcctga cttacaaaaa ggtaaatgta
      721 actcctcagt taacctggta gttatgggta catcttactc aaggaacatg gctgcaatct
      781 ttcaataaaa agttcactag aaaatggaag atgacttggt cattgctgtt tcgttattca
      841 atgttagatt caacacattg tttcattaga tgtatttgtg aacttaactc atagtgaact
      901 taactcataa aagagacatt gtatttgtgg tctctgttca ttaactttaa ttgctaaaat
      961 gagtctgaaa gtaacgaatt aacattgtta tgtttgggtc taaatgacca ctttactata
     1021 gctgtagttt ccttcagttc ctttttgacg tatttaggtt taagtgaccc attacagtat
     1081 aactgtgtac atgggttttg ttctcagttc ctttttttcg tgtttgagtc taaatgaccc
     1141 aaagtaatat aactatgtac atgggtctaa taataagatt tgttcttcat ttagcacatg
     1201 atatgtgttt ggttgttgtt taatagcagc tatatcggtc cctttcattt ttgtgtttgg
     1261 gtctgaatga ccactgtatt atagcgtgtg aatcagggga tccatcttgg catctcttag
     1321 tacgttccag caggtagggt ttttttgttc tcttatttct tttgatcggg attcagtggg
     1381 taatgggtca aaacatgtta ttttttggta cgatctgggg cgggctggtg tagatccaaa
     1441 acatttcatg tttgcagttg tggttattaa ttgttagtta gtcaaatacg agaatcatgt
     1501 tgaatttttg actaataaag attttggatc tacaacaagg tcttgcaata taaaaatatc
     1561 ttatatctta ggtcgctctt cattgttgac ttctctcatg tgacggactt tcgtgaagct
     1621 acatgtaggc agtatgaaga aaatgtatgc aatcgttgtg gatacttcaa tttcatgcga
     1681 ttaataaaga tcgtcagaag gacataatgt ggtcatggac attaaaggct gattgaagaa
     1741 tatgaggagg ctactaaaac acgactatgc aagtacttct acacaaattt catatcctta
     1801 cattttggtt tgctttttga agttaagcca atactaatta tatatactgc ttgagttgtt
     1861 gatactttta gttcaatgtt gaggtgtatg ggtaatgggt tttgggtcaa attgtgtttg
     1921 ggtcacataa agttttttat ggtgggtcaa caatttcaca tccaaatgcc cagactataa
     1981 acgggtcatg ttgaccataa ttatatttta acgattattt atatttcatt gcgataaagt
     2041 taagtattgt caactgtggg gaatcaatac ttgaatcatg tttttagttt cttgaatgac
     2101 ttttagttat ggttttaaac taatgactga ttttgtaaaa gttatggata attgagctgc
     2161 ctttcattag gaggttttgg tagttttggt tatgttttac tctttttggg agttcaaggg
     2221 ttgatggcga tgaggatgat gatggtgtaa gaagtaagtc aggcccaata cacaccggtg
     2281 acaagcatgt caactctgtt ctatacatcg atcccagaca accagatcct cttgaattcg
     2341 tgagaacgaa agtcaactaa taggaacaga tggatgtaag cgacttttat ttgtgtgatt
     2401 gttgttaacg aatcaactca tggctgggtt tcttgatatc gaattcaagc aattcaacaa
     2461 aagatttcta tcggaatcaa ttttaagaac tgcgctttgt caattcgagg ttgaatgttt
     2521 atgtcaggtc acttggcgct cttctcgatt ttgatggtta taaagaggca tatgttacaa
     2581 atataacaaa agacgttcaa tggcgtatta aatgtatata acacacacaa tgtgtaccaa
     2641 cattaacgta tgagtatact aattttttaa agccatcgta taacgcacgg gctattaaca
     2701 tcatgatgat gtcttggtaa atgatgtgga agacccaatt ggttcaatta tatcatcagt
     2761 atatccaatt tttttggaaa a
//
LOCUS       XR_011757135            3377 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X4, ncRNA.
ACCESSION   XR_011757135
VERSION     XR_011757135.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3377
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..3377
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 atatccacgt gggcctactg gtgcatcctc agccttatcg ttttttcaat aattacaaga
       61 aaatgacaag cgaccttttt aactatcgtt ttttcaaaat tagggttttt ttccagatat
      121 ttaccctaaa ttgttatcca gttctcttat caaccgttca atcgtgagaa aatcctacat
      181 ctgttcttca tccgctcaat cctttccctc tctaattagg gtttcaattt cataatcggt
      241 gttcaattcc tcatcaaatt cacacacata aacagatgtt ccaattgcat gaaacataca
      301 atcaattgct tttcgattat cacgatccaa gcgtttatgg tgatggaacg aagatgaatc
      361 agaaatctgg attagaatta atgatattgt tactatgttg atggaacgaa gaagaaggcg
      421 acgtaagtgg tggtttccgc cgttagtaac cattcttaat taaacagatg tttgatcatt
      481 gcagtcttgg aatgaaggat tcatgggacc tatgaagact ctggcggtcc caagtgttat
      541 caaaggcatt ggtaatgtgg ttctgtgctt gacgggacta cggtattacc atagcagcat
      601 gggcaacaat ggtgtcgtag actctcaaga aatcagacat aaagtatgaa cttaagaaca
      661 ctgatcaata atggctaaaa aacattgtgg aacatggctg gcctgactta caaaaaggta
      721 aatgtaactc ctcagttaac ctggtagtta tgggtacatc ttactcaagg aacatggctg
      781 caatctttca ataaaaagtt cactagaaaa tggaagatga cttggtcatt gctgtttcgt
      841 tattcaatgt tagattcaac acattgtttc attagatgta tttgtgaact taactcatag
      901 tgaacttaac tcataaaaga gacattgtat ttgtggtctc tgttcattaa ctttaattgc
      961 taaaatgagt ctgaaagtaa cgaattaaca ttgttatgtt tgggtctaaa tgaccacttt
     1021 actatagctg tagtttcctt cagttccttt ttgacgtatt taggtttaag tgacccatta
     1081 cagtataact gtgtacatgg gttttgttct cagttccttt ttttcgtgtt tgagtctaaa
     1141 tgacccaaag taatataact atgtacatgg gtctaataat aagatttgtt cttcatttag
     1201 cacatgatat gtgtttggtt gttgtttaat agcagctata tcggtccctt tcatttttgt
     1261 gtttgggtct gaatgaccac tgtattatag cgtgtgaatc aggggatcca tcttggcatc
     1321 tcttagtacg ttccagcagg tagggttttt ttgttctctt atttcttttg atcgggattc
     1381 agtgggtaat gggtcaaaac atgttatttt ttggtacgat ctggggcggg ctggtgtaga
     1441 tccaaaacat ttcatgtttg cagttgtggt tattaattgt tagttagtca aatacgagaa
     1501 tcatgttgaa tttttgacta ataaagattt tggatctaca acaaggtctt gcaatataaa
     1561 aatatcttat atcttaggtc gctcttcatt gttgacttct ctcatgtgac ggactttcgt
     1621 gaagctacat gtaggcagta tgaagaaaat gtatgcaatc gttgtggata cttcaatttc
     1681 atgcgattaa taaagatcgt caggtcagtt tgctattata cccggttgta ctttttagac
     1741 atgtttagac gtgtctttta tattttagta tgtgcttatt gtgatctgaa aatactaata
     1801 gttagattta tagtattggt tcataacaac tttgattcga attaactgat tatagggggt
     1861 aaaatagtaa gttttggata attataatta tacgtgttgt agcaatgttg atttttaaga
     1921 gattactaac tactggtgca atagtagaag catatagagc aagggatcct agaatggcta
     1981 ttgatcatgg tcaactataa aattcaaggg aataattatt tcaaaacaat taaaagtttc
     2041 aaataatata aatgcaacta atatgtttat taatatatca atgattaatt tagtcataag
     2101 tgcttttaaa gattatcatt aaatagtttg atgattatat ccactttgaa tgatacttaa
     2161 ttattatata tcaatatatg ttaactgtag tatataaaaa tgatactgtt atttgtgtct
     2221 tacaactttt gatctttata gtatgttttg aatggactat gtgttatctg atgtttgaat
     2281 gaggttgaat gagtattatg ttactactta gaaggacata atgtggtcat ggacattaaa
     2341 ggctgattga agaatatgag gaggctacta aaacacgact atgcaagtac ttctacacaa
     2401 atttcatatc cttacatttt ggtttgcttt ttgaagttaa gccaatacta attatatata
     2461 ctgcttgagt tgttgatact tttagttcaa tgttgaggtg tatgggtaat gggttttggg
     2521 tcaaattgtg tttgggtcac ataaagtttt ttatggtggg tcaacaattt cacatccaaa
     2581 tgcccagact ataaacgggt catgttgacc ataattatat tttaacgatt atttatattt
     2641 cattgcgata aagttaagta ttgtcaactg tggggaatca atacttgaat catgttttta
     2701 gtttcttgaa tgacttttag ttatggtttt aaactaatga ctgattttgt aaaagttatg
     2761 gataattgag ctgcctttca ttaggaggtt ttggtagttt tggttatgtt ttactctttt
     2821 tgggagttca agggttgatg gcgatgagga tgatgatggt gtaagaagta agtcaggccc
     2881 aatacacacc ggtgacaagc atgtcaactc tgttctatac atcgatccca gacaaccaga
     2941 tcctcttgaa ttcgtgagaa cgaaagtcaa ctaataggaa cagatggatg taagcgactt
     3001 ttatttgtgt gattgttgtt aacgaatcaa ctcatggctg ggtttcttga tatcgaattc
     3061 aagcaattca acaaaagatt tctatcggaa tcaattttaa gaactgcgct ttgtcaattc
     3121 gaggtcactt ggcgctcttc tcgattttga tggttataaa gaggcatatg ttacaaatat
     3181 aacaaaagac gttcaatggc gtattaaatg tatataacac acacaatgtg taccaacatt
     3241 aacgtatgag tatactaatt ttttaaagcc atcgtataac gcacgggcta ttaacatcat
     3301 gatgatgtct tggtaaatga tgtggaagac ccaattggtt caattatatc atcagtatat
     3361 ccaatttttt tggaaaa
//
LOCUS       XR_011757136            3334 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X5, ncRNA.
ACCESSION   XR_011757136
VERSION     XR_011757136.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3334
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..3334
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 tatatccacg tgggcctact ggtgcatcct cagccttatc gttttttcaa taattacaag
       61 aaaatgacaa gcgacctttt taactatcgt tttttcaaaa ttagggtttt tttccagata
      121 tttaccctaa attgttatcc agttctctta tcaaccgttc aatcgtgaga aaatcctaca
      181 tctgttcttc atccgctcaa tcctttccct ctctaattag ggtttcaatt tcataatcgg
      241 tgttcaattc ctcatcaaat tcacacacat aaacagatgt tccaattgca tgaaacatac
      301 aatcaattgc ttttcgatta tcacgatcca agcgtttatg gtgatggaac gaagatgaat
      361 cagaaatctg gattagaatt aatgatattg ttactatgtt gatggaacga agaagaaggc
      421 gactcttgga atgaaggatt catgggacct atgaagactc tggcggtccc aagtgttatc
      481 aaaggcattg gtaatgtggt tctgtgcttg acgggactac ggtattacca tagcagcatg
      541 ggcaacaatg gtgtcgtaga ctctcaagaa atcagacata aagtatgaac ttaagaacac
      601 tgatcaataa tggctaaaaa acattgtgga acatggctgg cctgacttac aaaaaggtaa
      661 atgtaactcc tcagttaacc tggtagttat gggtacatct tactcaagga acatggctgc
      721 aatctttcaa taaaaagttc actagaaaat ggaagatgac ttggtcattg ctgtttcgtt
      781 attcaatgtt agattcaaca cattgtttca ttagatgtat ttgtgaactt aactcatagt
      841 gaacttaact cataaaagag acattgtatt tgtggtctct gttcattaac tttaattgct
      901 aaaatgagtc tgaaagtaac gaattaacat tgttatgttt gggtctaaat gaccacttta
      961 ctatagctgt agtttccttc agttcctttt tgacgtattt aggtttaagt gacccattac
     1021 agtataactg tgtacatggg ttttgttctc agttcctttt tttcgtgttt gagtctaaat
     1081 gacccaaagt aatataacta tgtacatggg tctaataata agatttgttc ttcatttagc
     1141 acatgatatg tgtttggttg ttgtttaata gcagctatat cggtcccttt catttttgtg
     1201 tttgggtctg aatgaccact gtattatagc gtgtgaatca ggggatccat cttggcatct
     1261 cttagtacgt tccagcaggt agggtttttt tgttctctta tttcttttga tcgggattca
     1321 gtgggtaatg ggtcaaaaca tgttattttt tggtacgatc tggggcgggc tggtgtagat
     1381 ccaaaacatt tcatgtttgc agttgtggtt attaattgtt agttagtcaa atacgagaat
     1441 catgttgaat ttttgactaa taaagatttt ggatctacaa caaggtcttg caatataaaa
     1501 atatcttata tcttaggtcg ctcttcattg ttgacttctc tcatgtgacg gactttcgtg
     1561 aagctacatg taggcagtat gaagaaaatg tatgcaatcg ttgtggatac ttcaatttca
     1621 tgcgattaat aaagatcgtc aggtcagttt gctattatac ccggttgtac tttttagaca
     1681 tgtttagacg tgtcttttat attttagtat gtgcttattg tgatctgaaa atactaatag
     1741 ttagatttat agtattggtt cataacaact ttgattcgaa ttaactgatt atagggggta
     1801 aaatagtaag ttttggataa ttataattat acgtgttgta gcaatgttga tttttaagag
     1861 attactaact actggtgcaa tagtagaagc atatagagca agggatccta gaatggctat
     1921 tgatcatggt caactataaa attcaaggga ataattattt caaaacaatt aaaagtttca
     1981 aataatataa atgcaactaa tatgtttatt aatatatcaa tgattaattt agtcataagt
     2041 gcttttaaag attatcatta aatagtttga tgattatatc cactttgaat gatacttaat
     2101 tattatatat caatatatgt taactgtagt atataaaaat gatactgtta tttgtgtctt
     2161 acaacttttg atctttatag tatgttttga atggactatg tgttatctga tgtttgaatg
     2221 aggttgaatg agtattatgt tactacttag aaggacataa tgtggtcatg gacattaaag
     2281 gctgattgaa gaatatgagg aggctactaa aacacgacta tgcaagtact tctacacaaa
     2341 tttcatatcc ttacattttg gtttgctttt tgaagttaag ccaatactaa ttatatatac
     2401 tgcttgagtt gttgatactt ttagttcaat gttgaggtgt atgggtaatg ggttttgggt
     2461 caaattgtgt ttgggtcaca taaagttttt tatggtgggt caacaatttc acatccaaat
     2521 gcccagacta taaacgggtc atgttgacca taattatatt ttaacgatta tttatatttc
     2581 attgcgataa agttaagtat tgtcaactgt ggggaatcaa tacttgaatc atgtttttag
     2641 tttcttgaat gacttttagt tatggtttta aactaatgac tgattttgta aaagttatgg
     2701 ataattgagc tgcctttcat taggaggttt tggtagtttt ggttatgttt tactcttttt
     2761 gggagttcaa gggttgatgg cgatgaggat gatgatggtg taagaagtaa gtcaggccca
     2821 atacacaccg gtgacaagca tgtcaactct gttctataca tcgatcccag acaaccagat
     2881 cctcttgaat tcgtgagaac gaaagtcaac taataggaac agatggatgt aagcgacttt
     2941 tatttgtgtg attgttgtta acgaatcaac tcatggctgg gtttcttgat atcgaattca
     3001 agcaattcaa caaaagattt ctatcggaat caattttaag aactgcgctt tgtcaattcg
     3061 aggttgaatg tttatgtcag gtcacttggc gctcttctcg attttgatgg ttataaagag
     3121 gcatatgtta caaatataac aaaagacgtt caatggcgta ttaaatgtat ataacacaca
     3181 caatgtgtac caacattaac gtatgagtat actaattttt taaagccatc gtataacgca
     3241 cgggctatta acatcatgat gatgtcttgg taaatgatgt ggaagaccca attggttcaa
     3301 ttatatcatc agtatatcca atttttttgg aaaa
//
LOCUS       XR_011757137            2778 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X6, ncRNA.
ACCESSION   XR_011757137
VERSION     XR_011757137.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2778
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..2778
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 acgtgggcct actggtgcat cctcagcctt atcgtttttt caataattac aagaaaatga
       61 caagcgacct ttttaactat cgttttttca aaattagggt ttttttccag atatttaccc
      121 taaattgtta tccagttctc ttatcaaccg ttcaatcgtg agaaaatcct acatctgttc
      181 ttcatccgct caatcctttc cctctctaat tagggtttca atttcataat cggtgttcaa
      241 ttcctcatca aattcacaca cataaacaga tgttccaatt gcatgaaaca tacaatcaat
      301 tgcttttcga ttatcacgat ccaagcgttt atggtgatgg aacgaagatg aatcagaaat
      361 ctggattaga attaatgata ttgttactat gttgatggaa cgaagaagaa ggcgacgtaa
      421 gtggtggttt ccgccgttag taaccattct taattaaaca gatgtttgat cattgcagtc
      481 ttggaatgaa ggattcatgg gacctatgaa gactctggcg gtcccaagtg ttatcaaagg
      541 cattggtaat gtggttctgt gcttgacggg actacggtat taccatagca gcatgggcaa
      601 caatggtgtc gtagactctc aagaaatcag acataaagta tgaacttaag aacactgatc
      661 aataatggct aaaaaacatt gtggaacatg gctggcctga cttacaaaaa ggtaaatgta
      721 actcctcagt taacctggta gttatgggta catcttactc aaggaacatg gctgcaatct
      781 ttcaataaaa agttcactag aaaatggaag atgacttggt cattgctgtt tcgttattca
      841 atgttagatt caacacattg tttcattaga tgtatttgtg aacttaactc atagtgaact
      901 taactcataa aagagacatt gtatttgtgg tctctgttca ttaactttaa ttgctaaaat
      961 gagtctgaaa gtaacgaatt aacattgtta tgtttgggtc taaatgacca ctttactata
     1021 gctgtagttt ccttcagttc ctttttgacg tatttaggtt taagtgaccc attacagtat
     1081 aactgtgtac atgggttttg ttctcagttc ctttttttcg tgtttgagtc taaatgaccc
     1141 aaagtaatat aactatgtac atgggtctaa taataagatt tgttcttcat ttagcacatg
     1201 atatgtgttt ggttgttgtt taatagcagc tatatcggtc cctttcattt ttgtgtttgg
     1261 gtctgaatga ccactgtatt atagcgtgtg aatcagggga tccatcttgg catctcttag
     1321 tacgttccag caggtagggt ttttttgttc tcttatttct tttgatcggg attcagtggg
     1381 taatgggtca aaacatgtta ttttttggta cgatctgggg cgggctggtg tagatccaaa
     1441 acatttcatg tttgcagttg tggttattaa ttgttagtta gtcaaatacg agaatcatgt
     1501 tgaatttttg actaataaag attttggatc tacaacaagg tcttgcaata taaaaatatc
     1561 ttatatctta ggtcgctctt cattgttgac ttctctcatg tgacggactt tcgtgaagct
     1621 acatgtaggc agtatgaaga aaatgtatgc aatcgttgtg gatacttcaa tttcatgcga
     1681 ttaataaaga tcgtcaggac ataatgtggt catggacatt aaaggctgat tgaagaatat
     1741 gaggaggcta ctaaaacacg actatgcaag tacttctaca caaatttcat atccttacat
     1801 tttggtttgc tttttgaagt taagccaata ctaattatat atactgcttg agttgttgat
     1861 acttttagtt caatgttgag gtgtatgggt aatgggtttt gggtcaaatt gtgtttgggt
     1921 cacataaagt tttttatggt gggtcaacaa tttcacatcc aaatgcccag actataaacg
     1981 ggtcatgttg accataatta tattttaacg attatttata tttcattgcg ataaagttaa
     2041 gtattgtcaa ctgtggggaa tcaatacttg aatcatgttt ttagtttctt gaatgacttt
     2101 tagttatggt tttaaactaa tgactgattt tgtaaaagtt atggataatt gagctgcctt
     2161 tcattaggag gttttggtag ttttggttat gttttactct ttttgggagt tcaagggttg
     2221 atggcgatga ggatgatgat ggtgtaagaa gtaagtcagg cccaatacac accggtgaca
     2281 agcatgtcaa ctctgttcta tacatcgatc ccagacaacc agatcctctt gaattcgtga
     2341 gaacgaaagt caactaatag gaacagatgg atgtaagcga cttttatttg tgtgattgtt
     2401 gttaacgaat caactcatgg ctgggtttct tgatatcgaa ttcaagcaat tcaacaaaag
     2461 atttctatcg gaatcaattt taagaactgc gctttgtcaa ttcgaggttg aatgtttatg
     2521 tcaggtcact tggcgctctt ctcgattttg atggttataa agaggcatat gttacaaata
     2581 taacaaaaga cgttcaatgg cgtattaaat gtatataaca cacacaatgt gtaccaacat
     2641 taacgtatga gtatactaat tttttaaagc catcgtataa cgcacgggct attaacatca
     2701 tgatgatgtc ttggtaaatg atgtggaaga cccaattggt tcaattatat catcagtata
     2761 tccaattttt ttggaaaa
//
LOCUS       XR_011757138            2528 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X7, ncRNA.
ACCESSION   XR_011757138
VERSION     XR_011757138.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2528
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..2528
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 cgtgggccta ctggtgcatc ctcagcctta tcgttttttc aataattaca agaaaatgac
       61 aagcgacctt tttaactatc gttttttcaa aattagggtt tttttccaga tatttaccct
      121 aaattgttat ccagttctct tatcaaccgt tcaatcgtga gaaaatccta catctgttct
      181 tcatccgctc aatcctttcc ctctctaatt agggtttcaa tttcataatc ggtgttcaat
      241 tcctcatcaa attcacacac ataaacagat gttccaattg catgaaacat acaatcaatt
      301 gcttttcgat tatcacgatc caagcgttta tggtgatgga acgaagatga atcagaaatc
      361 tggattagaa ttaatgatat tgttactatg ttgatggaac gaagaagaag gcgacgtaag
      421 tggtggtttc cgccgttagt aaccattctt aattaaacag atgtttgatc attgcagtct
      481 tggaatgaag gattcatggg acctatgaag actctggcgg tcccaagtgt tatcaaaggc
      541 attggtaatg tggttctgtg cttgacggga ctacggtatt accatagcag catgggcaac
      601 aatggtgtcg tagactctca agaaatcaga cataaagtat gaacttaaga acactgatca
      661 ataatggcta aaaaacattg tggaacatgg ctggcctgac ttacaaaaag gtcgctcttc
      721 attgttgact tctctcatgt gacggacttt cgtgaagcta catgtaggca gtatgaagaa
      781 aatgtatgca atcgttgtgg atacttcaat ttcatgcgat taataaagat cgtcaggtca
      841 gtttgctatt atacccggtt gtacttttta gacatgttta gacgtgtctt ttatatttta
      901 gtatgtgctt attgtgatct gaaaatacta atagttagat ttatagtatt ggttcataac
      961 aactttgatt cgaattaact gattataggg ggtaaaatag taagttttgg ataattataa
     1021 ttatacgtgt tgtagcaatg ttgattttta agagattact aactactggt gcaatagtag
     1081 aagcatatag agcaagggat cctagaatgg ctattgatca tggtcaacta taaaattcaa
     1141 gggaataatt atttcaaaac aattaaaagt ttcaaataat ataaatgcaa ctaatatgtt
     1201 tattaatata tcaatgatta atttagtcat aagtgctttt aaagattatc attaaatagt
     1261 ttgatgatta tatccacttt gaatgatact taattattat atatcaatat atgttaactg
     1321 tagtatataa aaatgatact gttatttgtg tcttacaact tttgatcttt atagtatgtt
     1381 ttgaatggac tatgtgttat ctgatgtttg aatgaggttg aatgagtatt atgttactac
     1441 ttagaaggac ataatgtggt catggacatt aaaggctgat tgaagaatat gaggaggcta
     1501 ctaaaacacg actatgcaag tacttctaca caaatttcat atccttacat tttggtttgc
     1561 tttttgaagt taagccaata ctaattatat atactgcttg agttgttgat acttttagtt
     1621 caatgttgag gtgtatgggt aatgggtttt gggtcaaatt gtgtttgggt cacataaagt
     1681 tttttatggt gggtcaacaa tttcacatcc aaatgcccag actataaacg ggtcatgttg
     1741 accataatta tattttaacg attatttata tttcattgcg ataaagttaa gtattgtcaa
     1801 ctgtggggaa tcaatacttg aatcatgttt ttagtttctt gaatgacttt tagttatggt
     1861 tttaaactaa tgactgattt tgtaaaagtt atggataatt gagctgcctt tcattaggag
     1921 gttttggtag ttttggttat gttttactct ttttgggagt tcaagggttg atggcgatga
     1981 ggatgatgat ggtgtaagaa gtaagtcagg cccaatacac accggtgaca agcatgtcaa
     2041 ctctgttcta tacatcgatc ccagacaacc agatcctctt gaattcgtga gaacgaaagt
     2101 caactaatag gaacagatgg atgtaagcga cttttatttg tgtgattgtt gttaacgaat
     2161 caactcatgg ctgggtttct tgatatcgaa ttcaagcaat tcaacaaaag atttctatcg
     2221 gaatcaattt taagaactgc gctttgtcaa ttcgaggttg aatgtttatg tcaggtcact
     2281 tggcgctctt ctcgattttg atggttataa agaggcatat gttacaaata taacaaaaga
     2341 cgttcaatgg cgtattaaat gtatataaca cacacaatgt gtaccaacat taacgtatga
     2401 gtatactaat tttttaaagc catcgtataa cgcacgggct attaacatca tgatgatgtc
     2461 ttggtaaatg atgtggaaga cccaattggt tcaattatat catcagtata tccaattttt
     2521 ttggaaaa
//
LOCUS       XR_011757139            2536 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X8, ncRNA.
ACCESSION   XR_011757139
VERSION     XR_011757139.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2536
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..2536
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 cgtgggccta ctggtgcatc ctcagcctta tcgttttttc aataattaca agaaaatgac
       61 aagcgacctt tttaactatc gttttttcaa aattagggtt tttttccaga tatttaccct
      121 aaattgttat ccagttctct tatcaaccgt tcaatcgtga gaaaatccta catctgttct
      181 tcatccgctc aatcctttcc ctctctaatt agggtttcaa tttcataatc ggtgttcaat
      241 tcctcatcaa attcacacac ataaacagat gttccaattg catgaaacat acaatcaatt
      301 gcttttcgat tatcacgatc caagcgttta tggtgatgga acgaagatga atcagaaatc
      361 tggattagaa ttaatgatat tgttactatg ttgatggaac gaagaagaag gcgacgtaag
      421 tggtggtttc cgccgttagt aaccattctt aattaaacag atgtttgatc attgcagtct
      481 tggaatgaag gattcatggg acctatgaag actctggcgg tcccaagtgt tatcaaaggc
      541 attggtaatg tggttctgtg cttgacggga ctacggtatt accatagcag catgggcaac
      601 aatggtgtcg tagctttgta gactctcaag aaatcagaca taaagtatga acttaagaac
      661 actgatcaat aatggctaaa aaacattgtg gaacatggct ggcctgactt acaaaaaggt
      721 cgctcttcat tgttgacttc tctcatgtga cggactttcg tgaagctaca tgtaggcagt
      781 atgaagaaaa tgtatgcaat cgttgtggat acttcaattt catgcgatta ataaagatcg
      841 tcaggtcagt ttgctattat acccggttgt actttttaga catgtttaga cgtgtctttt
      901 atattttagt atgtgcttat tgtgatctga aaatactaat agttagattt atagtattgg
      961 ttcataacaa ctttgattcg aattaactga ttataggggg taaaatagta agttttggat
     1021 aattataatt atacgtgttg tagcaatgtt gatttttaag agattactaa ctactggtgc
     1081 aatagtagaa gcatatagag caagggatcc tagaatggct attgatcatg gtcaactata
     1141 aaattcaagg gaataattat ttcaaaacaa ttaaaagttt caaataatat aaatgcaact
     1201 aatatgttta ttaatatatc aatgattaat ttagtcataa gtgcttttaa agattatcat
     1261 taaatagttt gatgattata tccactttga atgatactta attattatat atcaatatat
     1321 gttaactgta gtatataaaa atgatactgt tatttgtgtc ttacaacttt tgatctttat
     1381 agtatgtttt gaatggacta tgtgttatct gatgtttgaa tgaggttgaa tgagtattat
     1441 gttactactt agaaggacat aatgtggtca tggacattaa aggctgattg aagaatatga
     1501 ggaggctact aaaacacgac tatgcaagta cttctacaca aatttcatat ccttacattt
     1561 tggtttgctt tttgaagtta agccaatact aattatatat actgcttgag ttgttgatac
     1621 ttttagttca atgttgaggt gtatgggtaa tgggttttgg gtcaaattgt gtttgggtca
     1681 cataaagttt tttatggtgg gtcaacaatt tcacatccaa atgcccagac tataaacggg
     1741 tcatgttgac cataattata ttttaacgat tatttatatt tcattgcgat aaagttaagt
     1801 attgtcaact gtggggaatc aatacttgaa tcatgttttt agtttcttga atgactttta
     1861 gttatggttt taaactaatg actgattttg taaaagttat ggataattga gctgcctttc
     1921 attaggaggt tttggtagtt ttggttatgt tttactcttt ttgggagttc aagggttgat
     1981 ggcgatgagg atgatgatgg tgtaagaagt aagtcaggcc caatacacac cggtgacaag
     2041 catgtcaact ctgttctata catcgatccc agacaaccag atcctcttga attcgtgaga
     2101 acgaaagtca actaatagga acagatggat gtaagcgact tttatttgtg tgattgttgt
     2161 taacgaatca actcatggct gggtttcttg atatcgaatt caagcaattc aacaaaagat
     2221 ttctatcgga atcaatttta agaactgcgc tttgtcaatt cgaggttgaa tgtttatgtc
     2281 aggtcacttg gcgctcttct cgattttgat ggttataaag aggcatatgt tacaaatata
     2341 acaaaagacg ttcaatggcg tattaaatgt atataacaca cacaatgtgt accaacatta
     2401 acgtatgagt atactaattt tttaaagcca tcgtataacg cacgggctat taacatcatg
     2461 atgatgtctt ggtaaatgat gtggaagacc caattggttc aattatatca tcagtatatc
     2521 caattttttt ggaaaa
//
LOCUS       XR_011757140            3100 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X9, ncRNA.
ACCESSION   XR_011757140
VERSION     XR_011757140.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3100
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..3100
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 atatccacgt gggcctactg gtgcatcctc agccttatcg ttttttcaat aattacaaga
       61 aaatgacaag cgaccttttt aactatcgtt ttttcaaaat tagggttttt ttccagatat
      121 ttaccctaaa ttgttatcca gttctcttat caaccgttca atcgtgagaa aatcctacat
      181 ctgttcttca tccgctcaat cctttccctc tctaattagg gtttcaattt cataatcggt
      241 gttcaattcc tcatcaaatt cacacacata aacagatgtt ccaattgcat gaaacataca
      301 atcaattgct tttcgattat cacgatccaa gcgtttatgg tgatggaacg aagatgaatc
      361 agaaatctgg attagaatta atgatattgt tactatgttg atggaacgaa gaagaaggcg
      421 acgtaagtgg tggtttccgc cgttagtaac cattcttaat taaacagatg tttgatcatt
      481 gcagtcttgg aatgaaggat tcatgggacc tatgaagact ctggcggtcc caagtgttat
      541 caaaggcatt ggtaatgtgg ttctgtgctt gacgggacta cggtattacc atagcagcat
      601 gggcaacaat ggtgtcgtag actctcaaga aatcagacat aaagtatgaa cttaagaaca
      661 ctgatcaata atggctaaaa aacattgtgg aacatggctg gcctgactta caaaaaggta
      721 aatgtaactc ctcagttaac ctggtagtta tgggtacatc ttactcaagg aacatggctg
      781 caatctttca ataaaaagtt cactagaaaa tggaagatga cttggtcatt gctgtttcgt
      841 tattcaatgt tagattcaac acattgtttc attagatgta tttgtgaact taactcatag
      901 tgaacttaac tcataaaaga gacattgtat ttgtggtctc tgttcattaa ctttaattgc
      961 taaaatgagt ctgaaagtaa cgaattaaca ttgttatgtt tgggtctaaa tgaccacttt
     1021 actatagctg tagtttcctt cagttccttt ttgacgtatt taggtttaag tgacccatta
     1081 cagtataact gtgtacatgg gttttgttct cagttccttt ttttcgtgtt tgagtctaaa
     1141 tgacccaaag taatataact atgtacatgg gtctaataat aagatttgtt cttcatttag
     1201 cacatgatat gtgtttggtt gttgtttaat agcagctata tcggtccctt tcatttttgt
     1261 gtttgggtct gaatgaccac tgtattatag cgtgtgaatc aggggatcca tcttggcatc
     1321 tcttagtacg ttccagcagg cagtatgaag aaaatgtatg caatcgttgt ggatacttca
     1381 atttcatgcg attaataaag atcgtcaggt cagtttgcta ttatacccgg ttgtactttt
     1441 tagacatgtt tagacgtgtc ttttatattt tagtatgtgc ttattgtgat ctgaaaatac
     1501 taatagttag atttatagta ttggttcata acaactttga ttcgaattaa ctgattatag
     1561 ggggtaaaat agtaagtttt ggataattat aattatacgt gttgtagcaa tgttgatttt
     1621 taagagatta ctaactactg gtgcaatagt agaagcatat agagcaaggg atcctagaat
     1681 ggctattgat catggtcaac tataaaattc aagggaataa ttatttcaaa acaattaaaa
     1741 gtttcaaata atataaatgc aactaatatg tttattaata tatcaatgat taatttagtc
     1801 ataagtgctt ttaaagatta tcattaaata gtttgatgat tatatccact ttgaatgata
     1861 cttaattatt atatatcaat atatgttaac tgtagtatat aaaaatgata ctgttatttg
     1921 tgtcttacaa cttttgatct ttatagtatg ttttgaatgg actatgtgtt atctgatgtt
     1981 tgaatgaggt tgaatgagta ttatgttact acttagaagg acataatgtg gtcatggaca
     2041 ttaaaggctg attgaagaat atgaggaggc tactaaaaca cgactatgca agtacttcta
     2101 cacaaatttc atatccttac attttggttt gctttttgaa gttaagccaa tactaattat
     2161 atatactgct tgagttgttg atacttttag ttcaatgttg aggtgtatgg gtaatgggtt
     2221 ttgggtcaaa ttgtgtttgg gtcacataaa gttttttatg gtgggtcaac aatttcacat
     2281 ccaaatgccc agactataaa cgggtcatgt tgaccataat tatattttaa cgattattta
     2341 tatttcattg cgataaagtt aagtattgtc aactgtgggg aatcaatact tgaatcatgt
     2401 ttttagtttc ttgaatgact tttagttatg gttttaaact aatgactgat tttgtaaaag
     2461 ttatggataa ttgagctgcc tttcattagg aggttttggt agttttggtt atgttttact
     2521 ctttttggga gttcaagggt tgatggcgat gaggatgatg atggtgtaag aagtaagtca
     2581 ggcccaatac acaccggtga caagcatgtc aactctgttc tatacatcga tcccagacaa
     2641 ccagatcctc ttgaattcgt gagaacgaaa gtcaactaat aggaacagat ggatgtaagc
     2701 gacttttatt tgtgtgattg ttgttaacga atcaactcat ggctgggttt cttgatatcg
     2761 aattcaagca attcaacaaa agatttctat cggaatcaat tttaagaact gcgctttgtc
     2821 aattcgaggt tgaatgttta tgtcaggtca cttggcgctc ttctcgattt tgatggttat
     2881 aaagaggcat atgttacaaa tataacaaaa gacgttcaat ggcgtattaa atgtatataa
     2941 cacacacaat gtgtaccaac attaacgtat gagtatacta attttttaaa gccatcgtat
     3001 aacgcacggg ctattaacat catgatgatg tcttggtaaa tgatgtggaa gacccaattg
     3061 gttcaattat atcatcagta tatccaattt ttttggaaaa
//
LOCUS       XR_011757141            1911 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X10, ncRNA.
ACCESSION   XR_011757141
VERSION     XR_011757141.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1911
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..1911
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 actggtgcat cctcagcctt atcgtttttt caataattac aagaaaatga caagcgacct
       61 ttttaactat cgttttttca aaattagggt ttttttccag atatttaccc taaattgtta
      121 tccagttctc ttatcaaccg ttcaatcgtg agaaaatcct acatctgttc ttcatccgct
      181 caatcctttc cctctctaat tagggtttca atttcataat cggtgttcaa ttcctcatca
      241 aattcacaca cataaacaga tgttccaatt gcatgaaaca tacaatcaat tgcttttcga
      301 ttatcacgat ccaagcgttt atggtgatgg aacgaagatg aatcagaaat ctggattaga
      361 attaatgata ttgttactat gttgatggaa cgaagaagaa ggcgacgtaa gtggtggttt
      421 ccgccgttag taaccattct taattaaaca gatgtttgat cattgcagtc ttggaatgaa
      481 ggattcatgg gacctatgaa gactctggcg gtcccaagtg ttatcaaagg cattggtaat
      541 gtggttctgt gcttgacggg actacggtat taccatagca gcatgggcaa caatggtgtc
      601 gtagactctc aagaaatcag acataaagta tgaacttaag aacactgatc aataatggct
      661 aaaaaacatt gtggaacatg gctggcctga cttacaaaaa ggtcgctctt cattgttgac
      721 ttctctcatg tgacggactt tcgtgaagct acatgtaggc agtatgaaga aaatgtatgc
      781 aatcgttgtg gatacttcaa tttcatgcga ttaataaaga tcgtcagaag gacataatgt
      841 ggtcatggac attaaaggct gattgaagaa tatgaggagg ctactaaaac acgactatgc
      901 aagtacttct acacaaattt catatcctta cattttggtt tgctttttga agttaagcca
      961 atactaatta tatatactgc ttgagttgtt gatactttta gttcaatgtt gaggtgtatg
     1021 ggtaatgggt tttgggtcaa attgtgtttg ggtcacataa agttttttat ggtgggtcaa
     1081 caatttcaca tccaaatgcc cagactataa acgggtcatg ttgaccataa ttatatttta
     1141 acgattattt atatttcatt gcgataaagt taagtattgt caactgtggg gaatcaatac
     1201 ttgaatcatg tttttagttt cttgaatgac ttttagttat ggttttaaac taatgactga
     1261 ttttgtaaaa gttatggata attgagctgc ctttcattag gaggttttgg tagttttggt
     1321 tatgttttac tctttttggg agttcaaggg ttgatggcga tgaggatgat gatggtgtaa
     1381 gaagtaagtc aggcccaata cacaccggtg acaagcatgt caactctgtt ctatacatcg
     1441 atcccagaca accagatcct cttgaattcg tgagaacgaa agtcaactaa taggaacaga
     1501 tggatgtaag cgacttttat ttgtgtgatt gttgttaacg aatcaactca tggctgggtt
     1561 tcttgatatc gaattcaagc aattcaacaa aagatttcta tcggaatcaa ttttaagaac
     1621 tgcgctttgt caattcgagg ttgaatgttt atgtcaggtc acttggcgct cttctcgatt
     1681 ttgatggtta taaagaggca tatgttacaa atataacaaa agacgttcaa tggcgtatta
     1741 aatgtatata acacacacaa tgtgtaccaa cattaacgta tgagtatact aattttttaa
     1801 agccatcgta taacgcacgg gctattaaca tcatgatgat gtcttggtaa atgatgtgga
     1861 agacccaatt ggttcaatta tatcatcagt atatccaatt tttttggaaa a
//
LOCUS       XR_011757142            2471 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X11, ncRNA.
ACCESSION   XR_011757142
VERSION     XR_011757142.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2471
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..2471
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 cgtgggccta ctggtgcatc ctcagcctta tcgttttttc aataattaca agaaaatgac
       61 aagcgacctt tttaactatc gttttttcaa aattagggtt tttttccaga tatttaccct
      121 aaattgttat ccagttctct tatcaaccgt tcaatcgtga gaaaatccta catctgttct
      181 tcatccgctc aatcctttcc ctctctaatt agggtttcaa tttcataatc ggtgttcaat
      241 tcctcatcaa attcacacac ataaacagat gttccaattg catgaaacat acaatcaatt
      301 gcttttcgat tatcacgatc caagcgttta tggtgatgga acgaagatga atcagaaatc
      361 tggattagaa ttaatgatat tgttactatg ttgatggaac gaagaagaag gcgacgtaag
      421 tggtggtttc cgccgttagt aaccattctt aattaaacag atgtttgatc attgcagtct
      481 tggaatgaag gattcatggg acctatgaag actctggcgg tcccaagtgt tatcaaaggc
      541 attggtaatg tggttctgtg cttgacggga ctacggtatt accatagcag catgggcaac
      601 aatggtgtcg tagactctca agaaatcaga cataaagtat gaacttaaga acactgatca
      661 ataatggcta aaaaacattg tggaacatgg ctggcctgac ttacaaaaag gcagtatgaa
      721 gaaaatgtat gcaatcgttg tggatacttc aatttcatgc gattaataaa gatcgtcagg
      781 tcagtttgct attatacccg gttgtacttt ttagacatgt ttagacgtgt cttttatatt
      841 ttagtatgtg cttattgtga tctgaaaata ctaatagtta gatttatagt attggttcat
      901 aacaactttg attcgaatta actgattata gggggtaaaa tagtaagttt tggataatta
      961 taattatacg tgttgtagca atgttgattt ttaagagatt actaactact ggtgcaatag
     1021 tagaagcata tagagcaagg gatcctagaa tggctattga tcatggtcaa ctataaaatt
     1081 caagggaata attatttcaa aacaattaaa agtttcaaat aatataaatg caactaatat
     1141 gtttattaat atatcaatga ttaatttagt cataagtgct tttaaagatt atcattaaat
     1201 agtttgatga ttatatccac tttgaatgat acttaattat tatatatcaa tatatgttaa
     1261 ctgtagtata taaaaatgat actgttattt gtgtcttaca acttttgatc tttatagtat
     1321 gttttgaatg gactatgtgt tatctgatgt ttgaatgagg ttgaatgagt attatgttac
     1381 tacttagaag gacataatgt ggtcatggac attaaaggct gattgaagaa tatgaggagg
     1441 ctactaaaac acgactatgc aagtacttct acacaaattt catatcctta cattttggtt
     1501 tgctttttga agttaagcca atactaatta tatatactgc ttgagttgtt gatactttta
     1561 gttcaatgtt gaggtgtatg ggtaatgggt tttgggtcaa attgtgtttg ggtcacataa
     1621 agttttttat ggtgggtcaa caatttcaca tccaaatgcc cagactataa acgggtcatg
     1681 ttgaccataa ttatatttta acgattattt atatttcatt gcgataaagt taagtattgt
     1741 caactgtggg gaatcaatac ttgaatcatg tttttagttt cttgaatgac ttttagttat
     1801 ggttttaaac taatgactga ttttgtaaaa gttatggata attgagctgc ctttcattag
     1861 gaggttttgg tagttttggt tatgttttac tctttttggg agttcaaggg ttgatggcga
     1921 tgaggatgat gatggtgtaa gaagtaagtc aggcccaata cacaccggtg acaagcatgt
     1981 caactctgtt ctatacatcg atcccagaca accagatcct cttgaattcg tgagaacgaa
     2041 agtcaactaa taggaacaga tggatgtaag cgacttttat ttgtgtgatt gttgttaacg
     2101 aatcaactca tggctgggtt tcttgatatc gaattcaagc aattcaacaa aagatttcta
     2161 tcggaatcaa ttttaagaac tgcgctttgt caattcgagg ttgaatgttt atgtcaggtc
     2221 acttggcgct cttctcgatt ttgatggtta taaagaggca tatgttacaa atataacaaa
     2281 agacgttcaa tggcgtatta aatgtatata acacacacaa tgtgtaccaa cattaacgta
     2341 tgagtatact aattttttaa agccatcgta taacgcacgg gctattaaca tcatgatgat
     2401 gtcttggtaa atgatgtgga agacccaatt ggttcaatta tatcatcagt atatccaatt
     2461 tttttggaaa a
//
LOCUS       XR_011757143            2485 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839875), transcript variant X12, ncRNA.
ACCESSION   XR_011757143
VERSION     XR_011757143.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2485
                     /gene="LOC139839875"
                     /note="uncharacterized LOC139839875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839875"
     ncRNA           1..2485
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839875"
                     /product="uncharacterized lncRNA, transcript variant X12"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839875"
ORIGIN      
        1 cgtgggccta ctggtgcatc ctcagcctta tcgttttttc aataattaca agaaaatgac
       61 aagcgacctt tttaactatc gttttttcaa aattagggtt tttttccaga tatttaccct
      121 aaattgttat ccagttctct tatcaaccgt tcaatcgtga gaaaatccta catctgttct
      181 tcatccgctc aatcctttcc ctctctaatt agggtttcaa tttcataatc ggtgttcaat
      241 tcctcatcaa attcacacac ataaacagat gttccaattg catgaaacat acaatcaatt
      301 gcttttcgat tatcacgatc caagcgttta tggtgatgga acgaagatga atcagaaatc
      361 tggattagaa ttaatgatat tgttactatg ttgatggaac gaagaagaag gcgacgtaag
      421 tggtggtttc cgccgttagt aaccattctt aattaaacag atgtttgatc attgcagtct
      481 tggaatgaag gattcatggg acctatgaag actctggcgg tcccaagtgt tatcaaaggc
      541 attggtaatg tggttctgtg cttgacggga ctacggtatt accatagcag catgggcaac
      601 aatggtgtcg tagactctca agaaatcaga cataaagtat gaacttaaga acactgatca
      661 ataatggcta aaaaacattg tggaacatgg ctggcctgac ttacaaaaag gtaaatgtaa
      721 ctcctcagtt aacctggtag ttatgggtac atcttactca aggaacatgg ctgcaatctt
      781 tcaataaaaa gttcactaga aaatggaaga tgacttggtc attgctgttt cgttattcaa
      841 tgttagattc aacacattgt ttcattagat gtatttgtga acttaactca tagtgaactt
      901 aactcataaa agagacattg tatttgtggt ctctgttcat taactttaat tgctaaaatg
      961 agtctgaaag taacgaatta acattgttat gtttgggtct aaatgaccac tttactatag
     1021 ctgtagtttc cttcagttcc tttttgacgt atttaggttt aagtgaccca ttacagtata
     1081 actgtgtaca tgggttttgt tctcagttcc tttttttcgt gtttgagtct aaatgaccca
     1141 aagtaatata actatgtaca tgggtctaat aataagattt gttcttcatt tagcacatga
     1201 tatgtgtttg gttgttgttt aatagcagct atatcggtcc ctttcatttt tgtgtttggg
     1261 tctgaatgac cactgtatta tagcgtgtga atcaggggat ccatcttggc atctcttagt
     1321 acgttccagc aggcagtatg aagaaaatgt atgcaatcgt tgtggatact tcaatttcat
     1381 gcgattaata aagatcgtca gaaggacata atgtggtcat ggacattaaa ggctgattga
     1441 agaatatgag gaggctacta aaacacgact atgcaagtac ttctacacaa atttcatatc
     1501 cttacatttt ggtttgcttt ttgaagttaa gccaatacta attatatata ctgcttgagt
     1561 tgttgatact tttagttcaa tgttgaggtg tatgggtaat gggttttggg tcaaattgtg
     1621 tttgggtcac ataaagtttt ttatggtggg tcaacaattt cacatccaaa tgcccagact
     1681 ataaacgggt catgttgacc ataattatat tttaacgatt atttatattt cattgcgata
     1741 aagttaagta ttgtcaactg tggggaatca atacttgaat catgttttta gtttcttgaa
     1801 tgacttttag ttatggtttt aaactaatga ctgattttgt aaaagttatg gataattgag
     1861 ctgcctttca ttaggaggtt ttggtagttt tggttatgtt ttactctttt tgggagttca
     1921 agggttgatg gcgatgagga tgatgatggt gtaagaagta agtcaggccc aatacacacc
     1981 ggtgacaagc atgtcaactc tgttctatac atcgatccca gacaaccaga tcctcttgaa
     2041 ttcgtgagaa cgaaagtcaa ctaataggaa cagatggatg taagcgactt ttatttgtgt
     2101 gattgttgtt aacgaatcaa ctcatggctg ggtttcttga tatcgaattc aagcaattca
     2161 acaaaagatt tctatcggaa tcaattttaa gaactgcgct ttgtcaattc gaggttgaat
     2221 gtttatgtca ggtcacttgg cgctcttctc gattttgatg gttataaaga ggcatatgtt
     2281 acaaatataa caaaagacgt tcaatggcgt attaaatgta tataacacac acaatgtgta
     2341 ccaacattaa cgtatgagta tactaatttt ttaaagccat cgtataacgc acgggctatt
     2401 aacatcatga tgatgtcttg gtaaatgatg tggaagaccc aattggttca attatatcat
     2461 cagtatatcc aatttttttg gaaaa
//
LOCUS       XM_071830072            2415 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides O-fucosyltransferase 35
            (LOC139839876), mRNA.
ACCESSION   XM_071830072
VERSION     XM_071830072.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2415
                     /gene="LOC139839876"
                     /note="O-fucosyltransferase 35; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139839876"
     CDS             106..1998
                     /gene="LOC139839876"
                     /codon_start=1
                     /product="O-fucosyltransferase 35"
                     /protein_id="XP_071686173.1"
                     /db_xref="GeneID:139839876"
                     /translation="MANSNSSPSADGFPQRVNSPRFSGPMTRRAQSFKRSSSNHNHHH
                     EIDVPLNSPSSRSEHLELFDSIPEKKQSSRLTQRHQPKKTPESPLNNYYFFVGLQHKK
                     KLFLSHCMFFLFCAFCLFLGILIVSVNGWFGSAIEKIGFDQDYWDSPISHKNQKDHKS
                     YNNIYQHQHQDQDDVNYVGVEENSLKQTLTMVASGIVGHQDHHKDDPTGIWTKPSSGN
                     YTQCIDRPKSHKKLDEKTNGYLLINANGGLNQMRFGICDMVAVAKIMKATLVLPSLDH
                     TSYWADESGFKDLFDWQHFIETLKDDVHIVEALPSAYAGLVPFSKTPISWSKVSYYKM
                     EIVPLLKHHKVVYFTHTDSRIANNGIPNSIQKLRCRVNYRALKYSAPIEALGKTLVAR
                     MRQNGGAGPYLALHLRYEKDMLAFTGCSHNLTRDEDEELRRMRYEVSHWKEKEIDGSE
                     KRQLGGCPLTPRETSLLLRGLGFPSTTRIYLVAGEPYGGNRTMHALNQHFPNIFSHST
                     LSTDTELRPFRNHQNMLAGLDYVVALQSDVFVYTYDGNMAKAVQGHRRFQDFMTTINP
                     DRMKFVKLVDELDEGKKTWEEFSNGVKKVHKQRYGGPYLREAGEFPKLEENFYANPLP
                     GCICIP"
     misc_feature    820..1779
                     /gene="LOC139839876"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; Region: O-FucT_plant; cd11299"
                     /db_xref="CDD:211385"
     misc_feature    order(844..855,1321..1323,1327..1329,1549..1557,
                     1681..1683,1738..1746)
                     /gene="LOC139839876"
                     /note="GDP-Fucose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:211385"
     polyA_site      2415
                     /gene="LOC139839876"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttttttttt tttttttttt ttcattataa ctcctcgcct gttttcataa aaatcatcaa
       61 tcaatcaatc aataatttct cttgttattt atacaccaac aacacatggc aaattccaat
      121 tccagtccca gcgccgatgg atttcctcaa cgcgttaaca gccctcgatt ctctggtccc
      181 atgactcggc gagctcaatc attcaaacgc agcagcagca atcataatca tcatcatgag
      241 attgatgttc cacttaactc acctagtagt agatctgaac accttgaact ctttgactct
      301 attcctgaaa agaagcaatc atcccgtttg actcaacgcc atcagcccaa aaagactccc
      361 gaatcccccc ttaataatta ctattttttt gttggattac aacacaagaa aaagttattt
      421 ttaagccact gcatgttttt tcttttttgt gccttctgtt tgtttttagg aatcttaata
      481 gtttctgtca atggatggtt tggatctgct attgaaaaaa ttggctttga tcaggattat
      541 tgggattcac caatatctca taagaatcaa aaggatcaca agtcttataa caacatatat
      601 caacatcaac atcaagatca agatgatgtg aattatgttg gagttgaaga aaacagtttg
      661 aaacaaaccc taacgatggt agcttcgggt atagttggtc atcaggatca tcacaaggat
      721 gatcccacag gtatatggac taaaccaagc agtggaaatt acactcagtg cattgaccgc
      781 ccaaaaagtc acaagaagtt agatgagaag acaaatggtt atcttcttat caatgcaaat
      841 ggaggcttga atcagatgag atttgggata tgtgatatgg tcgctgttgc taagatcatg
      901 aaggccacat tagtccttcc ttctcttgat cacacatctt actgggctga tgaaagtggg
      961 ttcaaagacc tgtttgactg gcaacacttc attgaaacct tgaaagatga tgttcacata
     1021 gttgaggcgt tgccgtctgc gtatgctgga cttgtacctt tttctaagac tccgatttca
     1081 tggtcaaagg ttagttatta taaaatggag attgtgccac ttctgaaaca tcacaaagtt
     1141 gtgtatttca ctcataccga ttcgagaatt gccaacaatg gtatcccaaa ctctattcag
     1201 aagttgaggt gccgtgtaaa ttatagggca ctcaagtatt ccgcacccat cgaggcactt
     1261 ggcaagactt tagttgctag aatgcgacaa aatggaggag ctggcccata tcttgctttg
     1321 cacttgaggt atgagaaaga catgctggca tttacggggt gtagtcacaa tttgacaaga
     1381 gatgaagatg aagagctgcg tagaatgaga tatgaagtga gtcattggaa ggaaaaagaa
     1441 atagacgggt cagagaaaag gcagttgggt gggtgcccat tgacccctag agagacctcc
     1501 cttttgctca gaggtttggg tttcccatcc accaccagaa tatatcttgt agctggtgaa
     1561 ccctatggtg gcaatcgcac catgcacgct ctcaatcaac atttcccaaa cattttttca
     1621 cattccactc tttccaccga tacagaattg aggcctttca ggaaccacca gaacatgctt
     1681 gctggtctcg attacgttgt cgctcttcaa agcgacgtct ttgtttatac ttatgatggt
     1741 aatatggcaa aggcggttca aggtcacagg cgatttcagg acttcatgac aaccatcaat
     1801 cctgacagga tgaagtttgt taagcttgtg gatgaattgg atgaggggaa gaagacttgg
     1861 gaggaattta gtaatggagt aaagaaagtt cacaagcaga gatatggagg tccttacctg
     1921 agggaggctg gcgaatttcc aaaattagaa gaaaatttct atgcaaatcc acttcctgga
     1981 tgtatatgca tcccataaat atattatata tatatattat atatatatat atacaacacc
     2041 accctcccac cgtgcagcac aacatggaat tattaaactc atagaccacc atgattgaaa
     2101 acaaacgaaa tacgtacaac gaaattgatc gatacaagac ggagatgtgg attggtgaaa
     2161 tcagtctcgt gatggacttg tattattgat ttaagagtaa tttgagcagc tgaggtcgaa
     2221 attttagaat tggcgcaagc tgtatgtatt attataataa tacaaggaag gatatttaaa
     2281 atgcacttca tactgacttg ttccataact tatacaatta gagtattcat gcttgtctgt
     2341 ttttaggccc aacaccatca gtcggtttga attgaaatca catttacatt tattaaatta
     2401 cttagttttt tcttc
//
LOCUS       XM_071830073            3697 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein CTR9 homolog
            (LOC139839877), mRNA.
ACCESSION   XM_071830073
VERSION     XM_071830073.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3697
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3697
                     /gene="LOC139839877"
                     /note="protein CTR9 homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139839877"
     CDS             93..3380
                     /gene="LOC139839877"
                     /codon_start=1
                     /product="protein CTR9 homolog"
                     /protein_id="XP_071686174.1"
                     /db_xref="GeneID:139839877"
                     /translation="MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLHLWL
                     IIAREYFKQGKIEQFRQILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETK
                     QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGDVDQAFAAFKIVLDGDRD
                     NIPALLGQACVEFNRAKYTSSLEMYKRVLQVYPRCPAAVRLGIGLCRYKLGQFERAKQ
                     AFERVLQLDPENVEALVALGIVDLQYNEASGIRGAMEKMQRAFDVYPYCATALNYLAN
                     HFFFTGQHFLVEQLTETALAATTHGSTRAHSFYNLARSYHSKGDYEKAGLYYMASVKE
                     INKPQEFILPFYGLGQVQLKLGDFKSSLSNFEKVLEVYPENCETLKAVAHIYLQLNQT
                     TKAHEALKKAVRIDPRDPEAFLDLGELLISTDSGAALDAFKTARNLLKKANEELSVEL
                     LNNIGVLHFERGEFELALETFKEALGDGIWDKLIDSEPQSDYDSIKKALYKPVDASLA
                     SRMYKDMQMFKNLEKDGIAVELPWDKVTTLSNLARLFEQLHKTETASILYRLILFKFP
                     EYVDAYLRLAAIAKARNNVSLSIELIRDALEVDDKNPDALCMLGDLELKNDDWVKAKD
                     TFRAAKDASNGKDSYATLCLGNWNYFAAVRSEKRAPKLEATHLEKAKELYTKVLVEHP
                     ANMYAANGAGVVLAEKGQFDIAKELFTQVQEAASGSVFVQMPDVWINLAHVHFAQGNF
                     SLAIKMYQNCLRKFYYNTDNQILLYLARTHYEAEQWQDCKKTLLKAIHLAPSNYTLRF
                     DTGVALQKFSASTLQKTKRTVDEVRATVAELKNAVRVFSQLSAASNLQFHGFDEKKIE
                     THVGYCKHLLDAAKVHCDAAELEDQQNRHRLELARQAAIREEESRLAEEQKKVKLEKR
                     KQEDELKKVMQQEQHLERIKEHWKSSGSKRKDRSQNEEEEGGGSEKRRRRSSGGKKRK
                     RDKKSETQVDDDQYEYEEDNNNTSNNYYEPDNHQITGQVDDDDDPQDLLAAAGLEDSD
                     ADDAGGAPSSNTGRRIRGWSESEEEDDEPEKRQPSSSPVRDNNSMGDDDDDDMMQQQQ
                     QQLSDGE"
     misc_feature    216..302
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    222..2486
                     /gene="LOC139839877"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     Region: PEP_TPR_lipo; TIGR02917"
                     /db_xref="CDD:274350"
     misc_feature    369..458
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    474..560
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(477..479,486..491,498..503,507..509,579..581,
                     588..593,600..605,609..614,681..683,693..698,705..710,
                     717..719)
                     /gene="LOC139839877"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    573..665
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    678..767
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    894..980
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1005..1091
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1125..1202
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(1128..1133,1140..1145,1149..1151,1221..1223,
                     1230..1235,1242..1247,1251..1256,1323..1325,1332..1337,
                     1344..1349,1356..1358)
                     /gene="LOC139839877"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1215..1307
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1320..1397
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1434..1517
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1701..1781
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(1707..1712,1719..1724,1728..1730,1800..1802,
                     1809..1814,1821..1826,1830..1835,1902..1904,1911..1916,
                     1923..1928,1935..1937)
                     /gene="LOC139839877"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1794..1886
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1899..1979
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(2148..2150,2157..2162,2169..2174,2178..2180,
                     2265..2267,2274..2279,2286..2291,2295..2300,2373..2375,
                     2382..2387,2394..2399,2406..2408)
                     /gene="LOC139839877"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    2148..2231
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    2259..2357
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    2370..2453
                     /gene="LOC139839877"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    <2721..>2897
                     /gene="LOC139839877"
                     /note="Family of unknown function (DUF5401); Region:
                     DUF5401; pfam17380"
                     /db_xref="CDD:375164"
     polyA_site      3697
                     /gene="LOC139839877"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatcaataat aataataata taatagatca attcaatctc aagtgagacg acgaaaggta
       61 aacctaattt taggtttagg taagaggtgg gaatggcgtg cgtgtatatt ccggtacaga
      121 attcagagga ggaagtacga gtagccctgg accagcttcc cagagacgcc actgatatcc
      181 tcgacattct taaagccgaa caagctcctc ttcatctttg gcttattatc gctcgggagt
      241 actttaaaca aggaaaaatt gagcagtttc gccaaattct cgaagaaggg tccagtcctg
      301 aaattgatga atattatgca gatgtgagat atgaaagaat agccatctta aatgccttgg
      361 gtgcttatta tagctacctt gggaaaattg agacaaagca aagagagaag gaagaacact
      421 tcattctggc gacacagtac tacaacaaag cctccagaat cgatatgcat gagccttcta
      481 cctgggttgg caaaggccaa cttttactag ctaagggtga tgtggatcaa gcttttgctg
      541 cgttcaagat tgtattagac ggagatcggg ataatattcc tgctcttctt ggccaggctt
      601 gtgttgaatt taatcgtgct aaatacacaa gttcattgga gatgtacaag agggtcctgc
      661 aagtgtatcc tcgatgtcct gcagctgtac gacttggcat aggtctctgt cgctacaaac
      721 tgggtcaatt tgagagggcc aaacaagcat ttgagcgggt attgcagtta gatccagaaa
      781 atgttgaggc ccttgtggct cttggaattg tagatctgca atacaatgaa gcttctggta
      841 ttaggggagc aatggaaaag atgcaaagag cgtttgatgt atatccatac tgtgcaacag
      901 cactaaacta tcttgcaaat catttcttct tcactggtca acattttcta gttgaacaat
      961 tgactgaaac agcacttgct gctaccactc atggctcaac aagggcacat tctttttata
     1021 atctcgcacg atcatatcat agcaagggtg attatgaaaa agctggattg tattatatgg
     1081 cgtctgtaaa ggaaatcaat aagccacaag agtttatttt acccttttat ggtttaggtc
     1141 aagtacaact aaaattggga gactttaaaa gctcactctc aaattttgag aaagtattgg
     1201 aagtttatcc cgagaattgt gagacgttaa aggctgttgc tcacatttat cttcagctca
     1261 atcagactac caaggctcat gaagctctga agaaagccgt cagaattgat cctcgtgatc
     1321 ccgaggcctt tttagatctt ggagaactgt taatatcaac cgactcagga gcggctttgg
     1381 atgcatttaa aaccgcacgt aatcttttga aaaaggcaaa tgaagaattg tcagttgagc
     1441 ttctcaacaa tattggtgtt cttcattttg aaagaggaga gttcgagctt gccctagaaa
     1501 ctttcaaaga ggctcttggt gatggaatat gggacaagtt aatagatagt gaaccgcaat
     1561 ctgactatga ttctatcaaa aaagcgttat acaaacccgt ggatgccagt ttagcttctc
     1621 gaatgtacaa ggacatgcag atgttcaaga atctcgaaaa agatggtatt gcagtggaat
     1681 taccatggga taaagtcaca acattatcca accttgctag actgttcgag cagttgcata
     1741 aaactgagac tgctagcata ttatatcgcc tgatcctgtt taagtttcct gagtatgtag
     1801 atgcttacct aaggcttgct gctattgcaa aagcacggaa taatgtctca ttaagcattg
     1861 aactgatccg tgatgctctg gaagtggatg ataaaaaccc agatgcatta tgcatgttag
     1921 gtgacttgga gctaaaaaac gatgattggg tcaaggcaaa agatacattc cgtgcagcta
     1981 aggatgcatc taatggaaag gattcttatg ctactctttg tctgggcaac tggaactact
     2041 ttgcagcagt cagatctgag aaaagagctc ctaagttaga agcgacccat ctggaaaaag
     2101 caaaggaatt atacaccaag gttttggtgg aacatccagc taatatgtat gctgccaatg
     2161 gtgctggtgt ggtgttggca gaaaaaggtc aatttgatat tgcaaaagaa ctatttacac
     2221 aggttcaaga agctgcaagt ggaagtgttt ttgtccagat gccggatgtg tggataaatt
     2281 tggcacacgt tcatttcgct caaggcaatt tttcattagc catcaaaatg tatcaaaact
     2341 gtctgcgcaa gttctattac aacacagaca atcagatact tttgtatcta gcccgtacgc
     2401 attatgaagc tgaacagtgg caggactgca aaaagacttt actgaaagcc attcacttgg
     2461 caccttcaaa ttacacctta cgatttgaca caggtgttgc cctccagaaa ttctcagcat
     2521 ccacattaca aaaaacaaaa aggactgttg atgaggtgcg tgcaacagtt gctgagctta
     2581 aaaatgctgt tcgcgtgttc agtcaattgt ctgcagcgtc aaatctacaa tttcacgggt
     2641 ttgatgaaaa gaaaattgaa actcatgttg ggtattgtaa gcatttgctg gacgctgcaa
     2701 aagttcactg tgatgctgct gagctggaag atcaacaaaa tagacataga ctagaactgg
     2761 ctcgtcaagc agcaatacgg gaggaagaga gtcgattggc cgaagagcag aagaaagtca
     2821 agttagaaaa acggaaacaa gaggatgagc tgaagaaggt catgcagcaa gaacagcatc
     2881 tcgagcgtat taaggaacat tggaagagca gcggatcgaa gcgaaaagat agaagccaaa
     2941 acgaggagga ggagggtggt ggtagtgaga agaggagaag aagaagtagc ggcggcaaga
     3001 agagaaagag agacaagaaa tccgaaactc aagtcgatga tgatcaatat gaatatgaag
     3061 aggataacaa taacactagc aacaactatt atgagccgga taatcatcaa attactggtc
     3121 aggttgatga tgatgatgat ccgcaggatc tgcttgctgc tgctggcctc gaagattctg
     3181 atgctgatga cgcaggtggt gcaccttcat caaatacagg tagaagaata cggggatggt
     3241 cagagtctga ggaggaggat gatgagcccg aaaagaggca gcctagctcc agtcctgtta
     3301 gggataacaa ctctatgggt gatgatgatg atgatgatat gatgcagcag cagcagcagc
     3361 agctgagtga tggagaataa tgaatccatc accacgtaaa atttaatcag gagtcgttta
     3421 cataaagaag attcacaggt caatttgatt tagtaatggt gtaagttgca acatgtttgc
     3481 gacttataaa gtttgtctag agagtaccct accccctacc ttgtctaagt tatgtgtagt
     3541 agtcctaagt ggtgacacac acacacactg agatttcaaa tgaaagtttt aattgcagtt
     3601 tatttaacat gtttataatt gtaacatgtt ttctgttatg aatctaagag acatatgtaa
     3661 caccctacat catcggatcc atctttttta tttatca
//
LOCUS       XM_071830074            1584 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vanillin synthase-like
            (LOC139839878), transcript variant X1, mRNA.
ACCESSION   XM_071830074
VERSION     XM_071830074.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1584
                     /gene="LOC139839878"
                     /note="vanillin synthase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839878"
     CDS             86..1288
                     /gene="LOC139839878"
                     /codon_start=1
                     /product="vanillin synthase-like isoform X1"
                     /protein_id="XP_071686175.1"
                     /db_xref="GeneID:139839878"
                     /translation="MAAMSVLLVVMMIIACAVGADSAGIGSIFSDENPIRQVVSDDLR
                     ELETRVLQVIGQTRHALTFARFAHRFGKKYESSDEMKRRYSIFVSSLDKIKSHNNKGL
                     SYTLGVNEFADMSWEEFGKQKLGAAQHCSATKKGNHILTDAILPLTQDWRKVGIVSPV
                     KNQGSCGSCWTFSTTGALEAAYAQAYGKSVSLSEQQLVDCAGDFNNYGCNGGLPSQAY
                     EYIKYNGGLDSEEAYPYTGVDGVCKYSSENAAVRVLDAVNITMGAEDELKHAVGVVRP
                     VSVAFQVIDNFRLYTGGVFTSDVCGSDPMDVNHAVVAVGYGVEDGVPYWLIKNSWGAD
                     WGLNGYFKMEMGKNMCGMVPLPSLILSIYLSITMIINQHLGYHLFFKLTLSLYPNYIF
                     NQYEYNIF"
     misc_feature    272..439
                     /gene="LOC139839878"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     Region: Inhibitor_I29; smart00848"
                     /db_xref="CDD:214853"
     misc_feature    518..1141
                     /gene="LOC139839878"
                     /note="Papain family cysteine protease; Region:
                     Peptidase_C1; pfam00112"
                     /db_xref="CDD:425470"
     misc_feature    order(572..574,590..592,1010..1012,1070..1072)
                     /gene="LOC139839878"
                     /note="active site"
                     /db_xref="CDD:239068"
     misc_feature    order(722..727,923..925,1004..1006,1013..1015)
                     /gene="LOC139839878"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     polyA_site      1584
                     /gene="LOC139839878"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atctatatac gctcgctttc tttcttctct ccctcgctct tttctcatta ataattaata
       61 atcaattact ttaattaatt aaaaaatggc ggctatgtca gtcctgttag ttgttatgat
      121 gatcatcgcg tgtgccgtgg gagcagatag cgctgggatc ggatccatct tctccgacga
      181 gaatccgatt agacaagttg tttctgatga tttacgagaa ttagagacac gcgttcttca
      241 agtgattggt caaactcgtc atgctcttac ctttgctaga ttcgctcaca ggttcggaaa
      301 gaaatacgag agtagcgatg agatgaaacg gaggtactcg atttttgttt caagtttgga
      361 caagatcaaa tcgcataata acaagggcct ctcgtatact cttggagtca acgagtttgc
      421 tgatatgtca tgggaagaat ttggtaaaca aaaactgggt gctgcgcaac actgttccgc
      481 taccaaaaag ggcaatcaca tactcactga tgccatcctt cctctcacgc aagattggag
      541 gaaagtagga attgtgagcc cagtgaagaa tcaaggatcc tgtggatctt gttggacatt
      601 cagcacgact ggagctcttg aggctgctta tgctcaggcg tatgggaagt cagtatctct
      661 gtctgaacaa caactagttg actgtgctgg agattttaat aactatggtt gcaacggtgg
      721 gttgccttcc caagcatatg aatacatcaa atacaatggt ggacttgact ctgaggaagc
      781 ttatccttac accggagtcg atggtgtttg caaatattct tctgagaatg ctgcagttcg
      841 tgtccttgat gcagttaaca tcaccatggg tgctgaggat gaattaaagc atgcagtagg
      901 tgttgttcgt ccagtgagtg tagcgtttca ggttattgat aacttcagac tttacactgg
      961 aggagttttc actagtgatg tctgtggcag tgatccgatg gatgtgaatc atgcggttgt
     1021 tgctgttgga tatggtgttg aagatggtgt cccatactgg cttatcaaga actcatgggg
     1081 agccgattgg ggtttgaatg gatacttcaa gatggagatg ggcaaaaaca tgtgtggtat
     1141 ggtccccctc ccctctctca ttctatctat ctatctatct atcaccatga tcatcaatca
     1201 gcaccttggt tatcatcttt ttttcaaatt gacgttatca ctgtacccaa attacatctt
     1261 taaccaatac gagtacaaca ttttctaacg aatgccatga ttaagtccgt atcatgaaaa
     1321 tgtaaagaaa tactacatta ataaatagta atacactgat taagatttga tagctagcca
     1381 atagccttga atgatatcaa ggtaattaat ttgttgctga gtacatatat acatatatac
     1441 gtacgtcctg gcatcaaaat taaagctgaa aaccgatttt gtgcctatat attgcaggtg
     1501 ttgcaacttg tgcatcttac cctattgttg cctagatgat ggatgatcga tcgtggtcga
     1561 tgatgttaca tttacagctt actg
//
LOCUS       XM_071830075            1515 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vanillin synthase-like
            (LOC139839878), transcript variant X2, mRNA.
ACCESSION   XM_071830075
VERSION     XM_071830075.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1515
                     /gene="LOC139839878"
                     /note="vanillin synthase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839878"
     CDS             83..1171
                     /gene="LOC139839878"
                     /codon_start=1
                     /product="vanillin synthase-like isoform X2"
                     /protein_id="XP_071686176.1"
                     /db_xref="GeneID:139839878"
                     /translation="MAAMSVLLVVMMIIACAVGADSAGIGSIFSDENPIRQVVSDDLR
                     ELETRVLQVIGQTRHALTFARFAHRFGKKYESSDEMKRRYSIFVSSLDKIKSHNNKGL
                     SYTLGVNEFADMSWEEFGKQKLGAAQHCSATKKGNHILTDAILPLTQDWRKVGIVSPV
                     KNQGSCGSCWTFSTTGALEAAYAQAYGKSVSLSEQQLVDCAGDFNNYGCNGGLPSQAY
                     EYIKYNGGLDSEEAYPYTGVDGVCKYSSENAAVRVLDAVNITMGAEDELKHAVGVVRP
                     VSVAFQVIDNFRLYTGGVFTSDVCGSDPMDVNHAVVAVGYGVEDGVPYWLIKNSWGAD
                     WGLNGYFKMEMGKNMCGVATCASYPIVA"
     misc_feature    269..436
                     /gene="LOC139839878"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     Region: Inhibitor_I29; smart00848"
                     /db_xref="CDD:214853"
     misc_feature    530..1159
                     /gene="LOC139839878"
                     /note="Peptidase C1A subfamily (MEROPS database
                     nomenclature); composed of cysteine peptidases (CPs)
                     similar to papain, including the mammalian CPs (cathepsins
                     B, C, F, H, L, K, O, S, V, X and W). Papain is an
                     endopeptidase with specific substrate preferences; Region:
                     Peptidase_C1A; cd02248"
                     /db_xref="CDD:239068"
     misc_feature    order(569..571,587..589,1007..1009,1067..1069)
                     /gene="LOC139839878"
                     /note="active site"
                     /db_xref="CDD:239068"
     misc_feature    order(719..724,920..922,1001..1003,1010..1012,1145..1147)
                     /gene="LOC139839878"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     polyA_site      1515
                     /gene="LOC139839878"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatatacgct cgctttcttt cttctctccc tcgctctttt ctcattaata attaataatc
       61 aattacttta attaattaaa aaatggcggc tatgtcagtc ctgttagttg ttatgatgat
      121 catcgcgtgt gccgtgggag cagatagcgc tgggatcgga tccatcttct ccgacgagaa
      181 tccgattaga caagttgttt ctgatgattt acgagaatta gagacacgcg ttcttcaagt
      241 gattggtcaa actcgtcatg ctcttacctt tgctagattc gctcacaggt tcggaaagaa
      301 atacgagagt agcgatgaga tgaaacggag gtactcgatt tttgtttcaa gtttggacaa
      361 gatcaaatcg cataataaca agggcctctc gtatactctt ggagtcaacg agtttgctga
      421 tatgtcatgg gaagaatttg gtaaacaaaa actgggtgct gcgcaacact gttccgctac
      481 caaaaagggc aatcacatac tcactgatgc catccttcct ctcacgcaag attggaggaa
      541 agtaggaatt gtgagcccag tgaagaatca aggatcctgt ggatcttgtt ggacattcag
      601 cacgactgga gctcttgagg ctgcttatgc tcaggcgtat gggaagtcag tatctctgtc
      661 tgaacaacaa ctagttgact gtgctggaga ttttaataac tatggttgca acggtgggtt
      721 gccttcccaa gcatatgaat acatcaaata caatggtgga cttgactctg aggaagctta
      781 tccttacacc ggagtcgatg gtgtttgcaa atattcttct gagaatgctg cagttcgtgt
      841 ccttgatgca gttaacatca ccatgggtgc tgaggatgaa ttaaagcatg cagtaggtgt
      901 tgttcgtcca gtgagtgtag cgtttcaggt tattgataac ttcagacttt acactggagg
      961 agttttcact agtgatgtct gtggcagtga tccgatggat gtgaatcatg cggttgttgc
     1021 tgttggatat ggtgttgaag atggtgtccc atactggctt atcaagaact catggggagc
     1081 cgattggggt ttgaatggat acttcaagat ggagatgggc aaaaacatgt gtggtgttgc
     1141 aacttgtgca tcttacccta ttgttgccta gatgatggat gatcgatcgt ggtcgatgat
     1201 gttacattta cagcttactg tgaaaacaaa gttgtaatct cacatatttg atggttgggt
     1261 gttaattaat tagtatggtg gccttcaaaa taaaaaaaaa atacagtaat tagtaaggtt
     1321 atcttttcat aaatgaatga atgaatgggg tggtggtgat cccgctattt gtaaatctgc
     1381 tttgttatat attgggcatt ggggtactct ttgtaaactt ccatttagtt tctagttcac
     1441 tttataatgc ttctgtcaat gtttgtatgt ggtttgaggc ttttcatcct attattaaaa
     1501 atgttattat tatta
//
LOCUS       XM_071830076            1814 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable sugar
            phosphate/phosphate translocator At1g06470 (LOC139839879),
            transcript variant X1, mRNA.
ACCESSION   XM_071830076
VERSION     XM_071830076.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1814
                     /gene="LOC139839879"
                     /note="probable sugar phosphate/phosphate translocator
                     At1g06470; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139839879"
     CDS             244..1638
                     /gene="LOC139839879"
                     /codon_start=1
                     /product="probable sugar phosphate/phosphate translocator
                     At1g06470 isoform X1"
                     /protein_id="XP_071686177.1"
                     /db_xref="GeneID:139839879"
                     /translation="MVESDLNTGKNVRSEGFGFHRDPSFSGWGEKDGMHNLKAVDETT
                     EIVEKSEVDDSFELPVLREVSLQSEGDEDRFRLSGVNMNGRGNQNENYASFDIEDTDL
                     VYKDTDVRSRSENSIAVSDIVKTLFLILMWYIFSTLLTLYNKTLLGDDMGRFPAPLLM
                     NTVHFAMQAVLSKGITYFWSKRFEPTVHMSWKDYFVKIVPTAFATALDINLSNASLVF
                     ITVTFATMCKSASPIFLLIFAFAFRLETPSVKLLGIILIISVGILLTVAKETAFEFWG
                     FIFVMLAAVMSGFRWSMTQILLQKEVYGLKNPLKLMSYVTPVMAVATALFSFILDPWD
                     EFRKSSYFDSSWHITRSGLLMLFGGTLAFFMVLTEYILVSITSAVTVTIAGVVKEAVT
                     ILVAVFYFHDEFTWLKGAGLVTIMFGVSLFNWYKYQKFQNRKASGDEAEESRNNVPAK
                     YVILEDMEEDVSSM"
     misc_feature    814..1506
                     /gene="LOC139839879"
                     /note="solute carrier family 35 member C2, member of the
                     triose-phosphate transporter family; Region: TPT_S35C2;
                     cd21092"
                     /db_xref="CDD:411044"
ORIGIN      
        1 caaagatctg catctatatg tgcgaacctg caacaaattc aaacggtgta tttgtatcta
       61 tctatatatc taccggttcc atctaataac ttgccgaagt tggacttgag gactattggg
      121 tgaattaggt taaagctgat atttgatact atatagagct aattgtattg gtggcagtga
      181 tcaattaagt ggatgtaatg ggggttaggg tttagatgga cgtgacaaca atttgtgaac
      241 aaaatggtag aaagtgattt aaacacagga aagaatgtcc gcagcgaagg atttggtttc
      301 catcgggatc cttcgttctc tggatggggt gaaaaagatg gaatgcacaa tttaaaggct
      361 gtagatgaaa ctactgagat tgtcgaaaaa tctgaagtag acgatagttt tgaactgccg
      421 gtgctgcgag aagtcagctt acagagtgag ggggatgaag ataggtttcg attgagtggt
      481 gtaaatatga atggaagagg aaatcaaaat gagaattatg catcttttga tattgaagat
      541 actgatttgg tttacaaaga tacagatgtt aggtcaagat cagagaattc tatagctgtt
      601 tcagatatag tcaagacgtt gtttttgata cttatgtggt acatattcag tacgttactg
      661 acactgtata ataagacttt actgggagat gatatgggaa gatttcctgc tcccttattg
      721 atgaatacgg ttcattttgc aatgcaagca gttttatcga aaggaatcac atacttttgg
      781 tcaaaaagat ttgaaccaac cgtacatatg tcatggaagg actactttgt gaaaattgta
      841 ccaacggctt ttgcaacggc actggatatc aacttgagca atgcatccct tgtttttata
      901 actgttacat ttgccactat gtgcaagtct gcctctccta tatttctctt aatatttgct
      961 tttgcattca ggttggagac tccaagtgtc aaacttttag gcatcatttt gataatatct
     1021 gttgggatcc tgttaacagt tgcgaaagag actgcatttg aattttgggg tttcatattt
     1081 gtcatgcttg ctgctgttat gtctggtttc cgctggagca tgactcaaat tcttcttcag
     1141 aaagaagtgt atggtttgaa gaatcccctg aagcttatga gctatgtaac tccagtaatg
     1201 gcagttgcaa ctgctttgtt ctctttcata ttggatccct gggatgagtt tagaaagagt
     1261 agttattttg atagctcatg gcatatcacc cgtagtggcc tcctgatgct ttttggggga
     1321 actcttgcct tttttatggt gttgacagaa tacattcttg tatcaataac aagtgcagta
     1381 acagtgacta ttgctggagt tgtgaaggaa gctgtcacaa tactggtagc tgtattttat
     1441 ttccatgatg aatttacatg gctgaaagga gctggtctcg ttacaattat gttcggcgtg
     1501 agcctattca actggtacaa gtaccaaaag tttcagaaca gaaaagcaag tggagatgaa
     1561 gccgaagaat ctcgaaataa cgtccctgca aagtacgtta ttcttgagga tatggaagaa
     1621 gacgtaagca gtatgtgagt gttggttcat catgctgtta tatgtttctt tacaagagta
     1681 tgaaccccat gtcagtaatt attagtcatt ttgttttttt agatccagta cattttctgg
     1741 ggttcattca taattgcaaa tacagttttg ttattgtggc caatttgttt accaatatgc
     1801 taaggaacaa gagc
//
LOCUS       XM_071830077            1808 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable sugar
            phosphate/phosphate translocator At1g06470 (LOC139839879),
            transcript variant X2, mRNA.
ACCESSION   XM_071830077
VERSION     XM_071830077.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1808
                     /gene="LOC139839879"
                     /note="probable sugar phosphate/phosphate translocator
                     At1g06470; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139839879"
     CDS             244..1632
                     /gene="LOC139839879"
                     /codon_start=1
                     /product="probable sugar phosphate/phosphate translocator
                     At1g06470 isoform X2"
                     /protein_id="XP_071686178.1"
                     /db_xref="GeneID:139839879"
                     /translation="MVESDLNTGKNVRSEGFGFHRDPSFSGWGEKDGMHNLKAVDETT
                     EIVEKSEVDDSFELPVLREVSLQSEGDEDRFRLSGVNMNGRGNQNENYASFDIEDTDL
                     VYKDTDVRSRSENSIAVSDIVKTLFLILMWYIFSTLLTLYNKTLLGDDMGRFPAPLLM
                     NTVHFAMQAVLSKGITYFWSKRFEPTVHMSWKDYFVKIVPTAFATALDINLSNASLVF
                     ITVTFATMCKSASPIFLLIFAFAFRLETPSVKLLGIILIISVGILLTVAKETAFEFWG
                     FIFVMLAAVMSGFRWSMTQILLQKEVYGLKNPLKLMSYVTPVMAVATALFSFILDPWD
                     EFRKSSYFDSSWHITRSGLLMLFGGTLAFFMVLTEYILVSITSAVTVTIAGVVKEAVT
                     ILVAVFYFHDEFTWLKGAGLVTIMFGVSLFNWYQKFQNRKASGDEAEESRNNVPAKYV
                     ILEDMEEDVSSM"
     misc_feature    814..1506
                     /gene="LOC139839879"
                     /note="solute carrier family 35 member C2, member of the
                     triose-phosphate transporter family; Region: TPT_S35C2;
                     cd21092"
                     /db_xref="CDD:411044"
ORIGIN      
        1 caaagatctg catctatatg tgcgaacctg caacaaattc aaacggtgta tttgtatcta
       61 tctatatatc taccggttcc atctaataac ttgccgaagt tggacttgag gactattggg
      121 tgaattaggt taaagctgat atttgatact atatagagct aattgtattg gtggcagtga
      181 tcaattaagt ggatgtaatg ggggttaggg tttagatgga cgtgacaaca atttgtgaac
      241 aaaatggtag aaagtgattt aaacacagga aagaatgtcc gcagcgaagg atttggtttc
      301 catcgggatc cttcgttctc tggatggggt gaaaaagatg gaatgcacaa tttaaaggct
      361 gtagatgaaa ctactgagat tgtcgaaaaa tctgaagtag acgatagttt tgaactgccg
      421 gtgctgcgag aagtcagctt acagagtgag ggggatgaag ataggtttcg attgagtggt
      481 gtaaatatga atggaagagg aaatcaaaat gagaattatg catcttttga tattgaagat
      541 actgatttgg tttacaaaga tacagatgtt aggtcaagat cagagaattc tatagctgtt
      601 tcagatatag tcaagacgtt gtttttgata cttatgtggt acatattcag tacgttactg
      661 acactgtata ataagacttt actgggagat gatatgggaa gatttcctgc tcccttattg
      721 atgaatacgg ttcattttgc aatgcaagca gttttatcga aaggaatcac atacttttgg
      781 tcaaaaagat ttgaaccaac cgtacatatg tcatggaagg actactttgt gaaaattgta
      841 ccaacggctt ttgcaacggc actggatatc aacttgagca atgcatccct tgtttttata
      901 actgttacat ttgccactat gtgcaagtct gcctctccta tatttctctt aatatttgct
      961 tttgcattca ggttggagac tccaagtgtc aaacttttag gcatcatttt gataatatct
     1021 gttgggatcc tgttaacagt tgcgaaagag actgcatttg aattttgggg tttcatattt
     1081 gtcatgcttg ctgctgttat gtctggtttc cgctggagca tgactcaaat tcttcttcag
     1141 aaagaagtgt atggtttgaa gaatcccctg aagcttatga gctatgtaac tccagtaatg
     1201 gcagttgcaa ctgctttgtt ctctttcata ttggatccct gggatgagtt tagaaagagt
     1261 agttattttg atagctcatg gcatatcacc cgtagtggcc tcctgatgct ttttggggga
     1321 actcttgcct tttttatggt gttgacagaa tacattcttg tatcaataac aagtgcagta
     1381 acagtgacta ttgctggagt tgtgaaggaa gctgtcacaa tactggtagc tgtattttat
     1441 ttccatgatg aatttacatg gctgaaagga gctggtctcg ttacaattat gttcggcgtg
     1501 agcctattca actggtacca aaagtttcag aacagaaaag caagtggaga tgaagccgaa
     1561 gaatctcgaa ataacgtccc tgcaaagtac gttattcttg aggatatgga agaagacgta
     1621 agcagtatgt gagtgttggt tcatcatgct gttatatgtt tctttacaag agtatgaacc
     1681 ccatgtcagt aattattagt cattttgttt ttttagatcc agtacatttt ctggggttca
     1741 ttcataattg caaatacagt tttgttattg tggccaattt gtttaccaat atgctaagga
     1801 acaagagc
//
LOCUS       XR_011757144            1721 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable sugar
            phosphate/phosphate translocator At1g06470 (LOC139839879),
            transcript variant X3, misc_RNA.
ACCESSION   XR_011757144
VERSION     XR_011757144.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1721
                     /gene="LOC139839879"
                     /note="probable sugar phosphate/phosphate translocator
                     At1g06470; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139839879"
     misc_RNA        1..1721
                     /gene="LOC139839879"
                     /product="probable sugar phosphate/phosphate translocator
                     At1g06470, transcript variant X3"
                     /db_xref="GeneID:139839879"
ORIGIN      
        1 caaagatctg catctatatg tgcgaacctg caacaaattc aaacggtgta tttgtatcta
       61 tctatatatc taccggttcc atctaataac ttgccgaagt tggacttgag gactattggg
      121 tgaattaggt taaagctgat atttgatact atatagagct aattgtattg gtggcagtga
      181 tcaattaagt ggatgtaatg ggggttaggg tttagatgga cgtgacaaca atttgtgaac
      241 aaaatggtag aaagtgattt aaacacagga aagaatgtcc gcagcgaagg atttggtttc
      301 catcgggatc cttcgttctc tggatggggt gaaaaagatg gaatgcacaa tttaaaggct
      361 gtagatgaaa ctactgagat tgtcgaaaaa tctgaagtag acgatagttt tgaactgccg
      421 gtgctgcgag aagtcagctt acagagtgag ggggatgaag ataggtttcg attgagtggt
      481 gtaaatatga atggaagagg aaatcaaaat gagaattatg catcttttga tattgaagat
      541 actgatttgg tttacaaaga tacagatgtt aggtcaagat cagagaattc tatagctgtt
      601 tcagatatag tcaagacgtt gtttttgata cttatgtggt acatattcag tacgttactg
      661 acactgtata ataagacttt actgggagat gatatgggaa gatttcctgc tcccttattg
      721 atgaatacgg ttcattttgc aatgcaagca gttttatcga aaggaatcac atacttttgg
      781 tcaaaaagat ttgaaccaac cgtacatatg tcatggaagg actactttgt gaaaattgta
      841 ccaacggctt ttgcaacggc actggatatc aacttgagca atgcatccct tgtttttata
      901 actgttacat ttgccactat gtgcaagtct gcctctccta tatttctctt aatatttgct
      961 tttgcattca ggttggagac tccaagtgtc aaacttttag gcatcatttt gataatatct
     1021 gttgggatcc tgttaacagt tgcgaaagag actgcatttg aattttgggg tttcatattt
     1081 gtcatgcttg ctgctgttat gtctggtttc cgctggagca tgactcaaat tcttcttcag
     1141 aaagaagtgt atggtttgaa gaatcccctg aagcttatga gctatgtaac tccagtaatg
     1201 gcagttgcaa ctgctttgtt ctctttcata ttggatccct gggatgagtt tagaaagagt
     1261 agttattttg atagctcatg gcatatcacc cgtagtggcc tcctgatgct ttttggggga
     1321 actcttgcct tttttatggt gttgacagaa tacattcttg tatcaataac aagtgcagta
     1381 acagtgacta ttgctggagt tgtgaaggaa gctgtcacaa tactggtagc tgtattttat
     1441 ttccatgatg aatttacatg gctgaaagga gctggtctcg ttacaattat gttcggcgtg
     1501 agcctattca actggtacaa gtaagtgact gggccccttt tctcctttgc tttttttgtc
     1561 atctggacgg acctttttta ttctataagt ttgttgccgc taattatggt accaaaagtt
     1621 tcagaacaga aaagcaagtg gagatgaagc cgaagaatct cgaaataacg tccctgcaaa
     1681 gtacgttatt cttgaggata tggaagaaga cgtaagcagt a
//
LOCUS       XM_071830078            5139 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides structural maintenance of
            chromosomes flexible hinge domain-containing protein GMI1
            (LOC139839881), transcript variant X1, mRNA.
ACCESSION   XM_071830078
VERSION     XM_071830078.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5139
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5139
                     /gene="LOC139839881"
                     /note="structural maintenance of chromosomes flexible
                     hinge domain-containing protein GMI1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839881"
     CDS             151..5007
                     /gene="LOC139839881"
                     /codon_start=1
                     /product="structural maintenance of chromosomes flexible
                     hinge domain-containing protein GMI1"
                     /protein_id="XP_071686179.1"
                     /db_xref="GeneID:139839881"
                     /translation="MESKRQFLTPRKRENDSSDVGSSKKMTPVSGSRSGSQSGSRRIY
                     MLKILLPNGLTVMIKLLEGTELVTVKELANRVKTLLEKKISNPKKSINWDADLYFLDD
                     FDRVYRDSIKLSRLELNKPHNFRLHDGSEPETIYENMWDLTPDTELLMELPEEYTFET
                     ALADLIDNSLQAVWTNDESERKLIRVEVSNDKISIFDTGPGMESIEKWGKMGASLHRA
                     LKTHAIGGKPPYLKPAFGMFGYGGFVASMHLGRETEVTSKTMKCKKVYMLRFKRAALV
                     NGSDSKKNWTTYGGLRNPTEEELELSPAGSFTRVEIFEPKMRRIDIRRLQCKLKDIYF
                     PYIQCDDLSKKGRTTRPIEFQINGEDLAEISGGEVAYTNLNSCNGPEFVLQLRFQLNH
                     EKASTTNSPGARDEANARLRCVYLPVKEGKESIATLLESLKEDGYDCKEEFESFTHVS
                     CRRLGRLLPDARWTWLPFMDLRHKKGDKAQVLKRSCMRVKCFIETDAGFSPTPSKTDF
                     AHQSPFTSALKNLGSKQHSEKGVEIDIRKDGRPLTLTQLDKQYQQWLVEMHEKYDEDI
                     DCGADEPVFILNPSNKRKLHVSNDVVRVHKVLRRKDKAWKSGMKIKILKGACAGFHNN
                     NVYATLEYFLLEGFQGDTGGDAWIICRTIDIPEEDGCLLQSINEIPKIDLRKSVSIPI
                     NVIDSEKCVAVDDSEWSKHIKKQQQKFPSLIEILDSKQCRELGIKASLPHDAEVYAGD
                     YSPCEIVAVVRPGNYKPGTASKRLDQKFVMKDEFEMTLTITFFGTKKSNDGINIYSGR
                     VKPSSKGDFQGLYVFQPKWKAHPLFHKAGNYTFTFFIRDSSCEKCVVKVEVKPLDVQR
                     WGLSKTVSNLNLTVGCSCDSISVSMFDKFENQLPFLKVPELLIEIKYSNETKFQVNTC
                     NPAKSLDKWALIIQGLLIESSSLDNIRPTYDATMMLCQPDGTHLLDFPIKVFPGPVKS
                     FRVQENFEKQLIPGQVIKEFTLELLDAYGNHVQEDEKVELSLNGFDWLGGSISSKVDT
                     FGYIHLGGLIRVTAGYGRNVSLSICSNGERISKEWQIERRFLRSVSTIPESCFVGSQL
                     ENMKFEVVNMEGEVDVNFHDEDTIGQSHTLVIKSEFMDIDESVKYAFRQGRCAVRAIP
                     VPFEEGEYSFVVAHSHYPELQLTVKVLVEQPQDMEPLNIVNLSTNEDIFPLRITDNTP
                     IDYRSAQHYTPEINTSPLLNTCYSNVVETESCTQFQKDLENEIVEFAFSIRKHEENIE
                     LLNCQLREIESQLSQLEVCRDQTRSIHTYGSPTKNEIEARIESKTDTAAAFVLKLLKQ
                     LSSEFRRGVMGNIIGVVALLGTTPTFELSRIFAEYLGDQILGVVCKSYQDVSLLETYE
                     ANGQLNRTHALHMLARELGQSINGRYLVLCIEDIRACTVDKDLQGKLLLPDPTFPDGS
                     TPQGFVGYAVNLIDIDVDHLNTKTDAGCGLRETLFYRLFGETQVYKTREHMKNAIPCI
                     KDGAVSLDGGILRGNGVTSIGCLEPDIIFPVVPARNRVPSQRDMAVMRRHKELMLKRK
                     ETMDELIEKKKSLESEQKKLAKKRDKFVKYFARNQSVAASSQVSPMICLEAKPFATQG
                     SYVQTQRL"
     misc_feature    622..1056
                     /gene="LOC139839881"
                     /note="Histidine kinase-like ATPase domain; Region:
                     HATPase; cl00075"
                     /db_xref="CDD:469604"
     misc_feature    order(640..642,652..654,661..663,733..735,739..741,
                     745..747,751..753,865..876,913..915,919..921,946..951)
                     /gene="LOC139839881"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340391"
     misc_feature    order(811..813,874..876)
                     /gene="LOC139839881"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340391"
ORIGIN      
        1 ttttcctctc aaaacccttt cttctcacaa tcaaaccttc attccatttc tcattataaa
       61 ccctaacaac aaaaacaaca aattcatcac aattttcata aaatcaacaa aacactagct
      121 tcacttcagt aaagtaagtt aggttttgat atggaaagca aacgtcaatt tctaacgcct
      181 cggaaacgag aaaacgacag ttctgacgtc ggaagttcta agaagatgac gccggtttcc
      241 ggttcacgat ccggttcaca atccggttca cggcggattt atatgctcaa aatactttta
      301 ccgaacggat taactgtaat gatcaagtta cttgaaggca cagagctagt tactgtgaag
      361 gagttagcta atcgagttaa aactttactt gaaaaaaaaa tatctaaccc taaaaaaagt
      421 attaactggg atgctgatct gtatttcctt gatgattttg atcgtgttta tcgagatagc
      481 atcaagttga gtagattgga gttgaataaa ccacacaatt tcagacttca tgacgggtcc
      541 gagccagaaa ccatctatga gaacatgtgg gatctaactc ccgatacaga actactcatg
      601 gaactacccg aagagtacac gtttgagacc gcattggctg atttaattga caattcattg
      661 caagccgtat ggacgaatga tgagagcgaa aggaagttaa taagggttga agtttccaat
      721 gataagatat caatatttga tacaggcccg ggcatggaat ctatagagaa atggggtaaa
      781 atgggcgctt ctcttcatcg agcattgaaa acacatgcca taggtggaaa gcctccgtat
      841 ttaaagcctg cttttggcat gtttggatat gggggctttg ttgcctctat gcatctagga
      901 agggaaacag aggtaacatc taagacgatg aaatgtaaaa aggtttatat gttacgcttt
      961 aagagagctg ctctggtcaa tggttctgat tcaaaaaaga actggacgac ttatggtgga
     1021 cttcgaaacc ctacagagga ggaacttgaa ctatctcctg ctggaagttt taccagggtt
     1081 gaaatttttg aaccgaagat gagaagaatt gacataaggc gtcttcaatg caaattgaaa
     1141 gatatttact ttccctacat ccagtgtgat gatctgtcca aaaaaggacg gacaacaagg
     1201 ccaattgaat ttcagatcaa tggtgaggat ctggcggaaa tctcgggcgg ggaggtagca
     1261 tatacgaatc taaactcttg taacggtcca gaattcgtat tacagcttcg ttttcagtta
     1321 aatcatgaaa aagcttctac aacaaatagt ccaggagcaa gagatgaggc gaatgcacgt
     1381 cttaggtgtg tgtatcttcc tgtgaaggag ggtaaagaga gcattgccac tcttctcgaa
     1441 tcattaaaag aagatgggta tgattgcaaa gaagaatttg aaagctttac tcacgtttct
     1501 tgtagacggt taggccgcct gctgccagat gctcgttgga catggcttcc attcatggat
     1561 ctcaggcaca aaaaggggga caaagcgcaa gttttaaaga gaagctgcat gagagttaaa
     1621 tgctttattg agactgatgc tggtttcagc ccaacaccct ctaagactga tttcgcacat
     1681 caaagtccgt ttacatctgc tttgaagaac ttgggcagca aacagcattc ggagaaaggt
     1741 gtggagattg atataagaaa agatggcaga ccattgactc tcacacaatt ggataaacag
     1801 taccaacaat ggcttgtgga aatgcatgaa aagtatgatg aagacatcga ttgtggagct
     1861 gatgaacctg tttttatatt aaacccttca aacaagagga agcttcatgt atccaatgat
     1921 gttgtaaggg ttcacaaagt tttaaggcga aaagataaag cttggaaatc agggatgaaa
     1981 ataaagattc taaagggagc atgtgcaggg tttcacaata ataatgtgta cgctacattg
     2041 gaatacttcc tccttgaagg ttttcaagga gatacaggcg gggatgcatg gataatttgc
     2101 aggactatcg atatacctga agaagatggc tgtctccttc agtctattaa tgaaattcca
     2161 aaaattgatt tgcgaaaatc agtttctata ccaataaatg tcattgattc tgaaaagtgt
     2221 gtagcggttg atgactcaga atggagtaag cacatcaaaa aacaacaaca gaaattccct
     2281 tccttaatcg aaatattgga ttcaaaacaa tgtcgcgagt tgggaatcaa agcgtcgtta
     2341 cctcatgatg ctgaagttta cgccggggac tattcaccct gtgaaattgt tgctgtcgtt
     2401 cgccctggta actataaacc agggactgct tccaaacgat tggatcaaaa atttgtgatg
     2461 aaagatgagt ttgagatgac actaacaatc acattttttg gaactaaaaa atctaacgat
     2521 ggcattaata tatattctgg acgtgtaaaa ccttcttcaa aaggagactt tcaaggttta
     2581 tacgtttttc aaccaaaatg gaaggcacat ccgctttttc ataaagctgg aaactataca
     2641 ttcacatttt tcatcagaga ttcaagttgt gagaaatgtg tagtgaaggt tgaagttaaa
     2701 ccacttgatg ttcagagatg gggactttcg aaaacggttt ctaatctcaa tttaacggtt
     2761 ggctgttctt gtgattccat ttctgtatca atgtttgata aatttgaaaa tcaacttcca
     2821 tttttgaaag ttcccgagtt gctgatcgaa atcaaatact caaacgagac aaagtttcaa
     2881 gtgaacacat gtaaccctgc taaatctttg gataagtggg ctctaataat tcagggtttg
     2941 cttattgaga gctctagttt ggacaacatt cgaccaacat atgatgccac tatgatgtta
     3001 tgtcagcctg atggaacaca cttgttagat ttcccaatta aagtgtttcc tggacccgta
     3061 aaaagtttta gagtgcaaga aaactttgag aagcaattga ttccggggca agtaattaaa
     3121 gagtttactt tggagttgct agatgcatat ggaaatcatg tacaagaaga tgaaaaggtg
     3181 gagttaagtc tgaatggatt tgattggttg ggcggatcaa tttccagtaa ggtggatact
     3241 tttgggtaca ttcatcttgg tggcctaata agagttactg caggctatgg aagaaatgta
     3301 tcattgtcaa tatgctcaaa tggagaacgt ataagcaagg aatggcagat tgaaagaagg
     3361 tttctgagaa gtgtatcaac gatacctgaa agctgttttg tgggttcaca acttgaaaac
     3421 atgaagtttg aagttgtaaa tatggagggc gaggtggatg ttaactttca tgatgaggat
     3481 acgattggtc aatctcatac acttgtaatt aaatcagagt ttatggatat cgacgaatct
     3541 gtaaagtacg cttttcgtca aggacgttgt gcagttcgtg cgattcctgt tccttttgag
     3601 gaaggggagt atagttttgt tgttgctcat tctcactatc cagagcttca attgactgtt
     3661 aaggttctcg ttgagcaacc tcaagatatg gagcctctaa atatcgtaaa cctatctacc
     3721 aacgaagata ttttccctct tagaatcaca gataatacac cgattgacta caggagtgcg
     3781 caacactata ctccagagat aaatacttca cccctactga atacatgtta ttcgaatgta
     3841 gtagaaactg aatcttgcac gcaatttcaa aaggaccttg agaacgagat tgttgaattt
     3901 gctttcagta taaggaaaca tgaagagaat atagagctac tcaattgtca gctaagagaa
     3961 attgagtccc agctgtcaca attggaggtt tgcagggacc aaactcgtag tattcacaca
     4021 tatggttcac caacgaaaaa tgaaattgaa gctcggattg aatcgaagac tgacactgct
     4081 gctgcttttg tcttgaaact attgaaacaa ttgtcaagtg agtttcgacg tggcgttatg
     4141 ggaaatatta ttggtgtcgt tgcacttctt ggaacaactc ctactttcga gcttagcaga
     4201 atatttgcag agtatcttgg tgatcagata cttggagtgg tatgcaaatc gtatcaggat
     4261 gtgagtttac ttgagaccta tgaagccaat ggacagttaa atcgtacaca tgcacttcac
     4321 atgttagcaa gagaactcgg tcaatctatc aacggtcgtt atcttgtttt atgcattgaa
     4381 gatataaggg catgtacggt agataaagat cttcaaggaa agcttctttt gccagatccc
     4441 acctttcctg atggatccac tccacaaggt tttgtgggtt atgcagtaaa cttgatagat
     4501 atagatgttg atcacttgaa cactaaaact gatgctggtt gtggtcttcg cgagactttg
     4561 ttttatcgtc tttttgggga aacacaagtt tataaaacca gggaacacat gaaaaatgct
     4621 attccttgca taaaagatgg tgcagtttct ttagatggtg gaattctaag aggcaatggt
     4681 gtcacttcta ttggatgctt ggaaccggat atcatctttc ctgtagttcc tgcaagaaat
     4741 cgtgtgccat ctcagcgtga catggcagtt atgaggcgtc acaaagaact gatgctgaaa
     4801 cggaaagaaa cgatggatga actgattgaa aagaagaaat ctcttgagag tgaacaaaaa
     4861 aagttagcga aaaaacgaga taaatttgtg aagtacttcg caaggaacca atccgttgct
     4921 gccagctctc aagtctctcc tatgatctgt ttggaggcga aaccctttgc tacccaaggt
     4981 tcatatgttc aaactcaaag gttgtgaaac acattcaaga aacatcctaa aacttgaatt
     5041 aatgtgggtt atttttgcat atataagtgg cttattatgg atcttgtttt gacgtttatc
     5101 ttatctggat gataagtaaa tattttgggt gtgttttat
//
LOCUS       XM_071830079            5100 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides structural maintenance of
            chromosomes flexible hinge domain-containing protein GMI1
            (LOC139839881), transcript variant X2, mRNA.
ACCESSION   XM_071830079
VERSION     XM_071830079.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5100
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5100
                     /gene="LOC139839881"
                     /note="structural maintenance of chromosomes flexible
                     hinge domain-containing protein GMI1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839881"
     CDS             112..4968
                     /gene="LOC139839881"
                     /codon_start=1
                     /product="structural maintenance of chromosomes flexible
                     hinge domain-containing protein GMI1"
                     /protein_id="XP_071686180.1"
                     /db_xref="GeneID:139839881"
                     /translation="MESKRQFLTPRKRENDSSDVGSSKKMTPVSGSRSGSQSGSRRIY
                     MLKILLPNGLTVMIKLLEGTELVTVKELANRVKTLLEKKISNPKKSINWDADLYFLDD
                     FDRVYRDSIKLSRLELNKPHNFRLHDGSEPETIYENMWDLTPDTELLMELPEEYTFET
                     ALADLIDNSLQAVWTNDESERKLIRVEVSNDKISIFDTGPGMESIEKWGKMGASLHRA
                     LKTHAIGGKPPYLKPAFGMFGYGGFVASMHLGRETEVTSKTMKCKKVYMLRFKRAALV
                     NGSDSKKNWTTYGGLRNPTEEELELSPAGSFTRVEIFEPKMRRIDIRRLQCKLKDIYF
                     PYIQCDDLSKKGRTTRPIEFQINGEDLAEISGGEVAYTNLNSCNGPEFVLQLRFQLNH
                     EKASTTNSPGARDEANARLRCVYLPVKEGKESIATLLESLKEDGYDCKEEFESFTHVS
                     CRRLGRLLPDARWTWLPFMDLRHKKGDKAQVLKRSCMRVKCFIETDAGFSPTPSKTDF
                     AHQSPFTSALKNLGSKQHSEKGVEIDIRKDGRPLTLTQLDKQYQQWLVEMHEKYDEDI
                     DCGADEPVFILNPSNKRKLHVSNDVVRVHKVLRRKDKAWKSGMKIKILKGACAGFHNN
                     NVYATLEYFLLEGFQGDTGGDAWIICRTIDIPEEDGCLLQSINEIPKIDLRKSVSIPI
                     NVIDSEKCVAVDDSEWSKHIKKQQQKFPSLIEILDSKQCRELGIKASLPHDAEVYAGD
                     YSPCEIVAVVRPGNYKPGTASKRLDQKFVMKDEFEMTLTITFFGTKKSNDGINIYSGR
                     VKPSSKGDFQGLYVFQPKWKAHPLFHKAGNYTFTFFIRDSSCEKCVVKVEVKPLDVQR
                     WGLSKTVSNLNLTVGCSCDSISVSMFDKFENQLPFLKVPELLIEIKYSNETKFQVNTC
                     NPAKSLDKWALIIQGLLIESSSLDNIRPTYDATMMLCQPDGTHLLDFPIKVFPGPVKS
                     FRVQENFEKQLIPGQVIKEFTLELLDAYGNHVQEDEKVELSLNGFDWLGGSISSKVDT
                     FGYIHLGGLIRVTAGYGRNVSLSICSNGERISKEWQIERRFLRSVSTIPESCFVGSQL
                     ENMKFEVVNMEGEVDVNFHDEDTIGQSHTLVIKSEFMDIDESVKYAFRQGRCAVRAIP
                     VPFEEGEYSFVVAHSHYPELQLTVKVLVEQPQDMEPLNIVNLSTNEDIFPLRITDNTP
                     IDYRSAQHYTPEINTSPLLNTCYSNVVETESCTQFQKDLENEIVEFAFSIRKHEENIE
                     LLNCQLREIESQLSQLEVCRDQTRSIHTYGSPTKNEIEARIESKTDTAAAFVLKLLKQ
                     LSSEFRRGVMGNIIGVVALLGTTPTFELSRIFAEYLGDQILGVVCKSYQDVSLLETYE
                     ANGQLNRTHALHMLARELGQSINGRYLVLCIEDIRACTVDKDLQGKLLLPDPTFPDGS
                     TPQGFVGYAVNLIDIDVDHLNTKTDAGCGLRETLFYRLFGETQVYKTREHMKNAIPCI
                     KDGAVSLDGGILRGNGVTSIGCLEPDIIFPVVPARNRVPSQRDMAVMRRHKELMLKRK
                     ETMDELIEKKKSLESEQKKLAKKRDKFVKYFARNQSVAASSQVSPMICLEAKPFATQG
                     SYVQTQRL"
     misc_feature    583..1017
                     /gene="LOC139839881"
                     /note="Histidine kinase-like ATPase domain; Region:
                     HATPase; cl00075"
                     /db_xref="CDD:469604"
     misc_feature    order(601..603,613..615,622..624,694..696,700..702,
                     706..708,712..714,826..837,874..876,880..882,907..912)
                     /gene="LOC139839881"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340391"
     misc_feature    order(772..774,835..837)
                     /gene="LOC139839881"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340391"
ORIGIN      
        1 ccttcattcc atttctcatt ataaacccta acaacaaaaa caacaaattc atcacaattt
       61 tcataaaatc aacaaaacac tagcttcact tcagtaaagt aaggttttga tatggaaagc
      121 aaacgtcaat ttctaacgcc tcggaaacga gaaaacgaca gttctgacgt cggaagttct
      181 aagaagatga cgccggtttc cggttcacga tccggttcac aatccggttc acggcggatt
      241 tatatgctca aaatactttt accgaacgga ttaactgtaa tgatcaagtt acttgaaggc
      301 acagagctag ttactgtgaa ggagttagct aatcgagtta aaactttact tgaaaaaaaa
      361 atatctaacc ctaaaaaaag tattaactgg gatgctgatc tgtatttcct tgatgatttt
      421 gatcgtgttt atcgagatag catcaagttg agtagattgg agttgaataa accacacaat
      481 ttcagacttc atgacgggtc cgagccagaa accatctatg agaacatgtg ggatctaact
      541 cccgatacag aactactcat ggaactaccc gaagagtaca cgtttgagac cgcattggct
      601 gatttaattg acaattcatt gcaagccgta tggacgaatg atgagagcga aaggaagtta
      661 ataagggttg aagtttccaa tgataagata tcaatatttg atacaggccc gggcatggaa
      721 tctatagaga aatggggtaa aatgggcgct tctcttcatc gagcattgaa aacacatgcc
      781 ataggtggaa agcctccgta tttaaagcct gcttttggca tgtttggata tgggggcttt
      841 gttgcctcta tgcatctagg aagggaaaca gaggtaacat ctaagacgat gaaatgtaaa
      901 aaggtttata tgttacgctt taagagagct gctctggtca atggttctga ttcaaaaaag
      961 aactggacga cttatggtgg acttcgaaac cctacagagg aggaacttga actatctcct
     1021 gctggaagtt ttaccagggt tgaaattttt gaaccgaaga tgagaagaat tgacataagg
     1081 cgtcttcaat gcaaattgaa agatatttac tttccctaca tccagtgtga tgatctgtcc
     1141 aaaaaaggac ggacaacaag gccaattgaa tttcagatca atggtgagga tctggcggaa
     1201 atctcgggcg gggaggtagc atatacgaat ctaaactctt gtaacggtcc agaattcgta
     1261 ttacagcttc gttttcagtt aaatcatgaa aaagcttcta caacaaatag tccaggagca
     1321 agagatgagg cgaatgcacg tcttaggtgt gtgtatcttc ctgtgaagga gggtaaagag
     1381 agcattgcca ctcttctcga atcattaaaa gaagatgggt atgattgcaa agaagaattt
     1441 gaaagcttta ctcacgtttc ttgtagacgg ttaggccgcc tgctgccaga tgctcgttgg
     1501 acatggcttc cattcatgga tctcaggcac aaaaaggggg acaaagcgca agttttaaag
     1561 agaagctgca tgagagttaa atgctttatt gagactgatg ctggtttcag cccaacaccc
     1621 tctaagactg atttcgcaca tcaaagtccg tttacatctg ctttgaagaa cttgggcagc
     1681 aaacagcatt cggagaaagg tgtggagatt gatataagaa aagatggcag accattgact
     1741 ctcacacaat tggataaaca gtaccaacaa tggcttgtgg aaatgcatga aaagtatgat
     1801 gaagacatcg attgtggagc tgatgaacct gtttttatat taaacccttc aaacaagagg
     1861 aagcttcatg tatccaatga tgttgtaagg gttcacaaag ttttaaggcg aaaagataaa
     1921 gcttggaaat cagggatgaa aataaagatt ctaaagggag catgtgcagg gtttcacaat
     1981 aataatgtgt acgctacatt ggaatacttc ctccttgaag gttttcaagg agatacaggc
     2041 ggggatgcat ggataatttg caggactatc gatatacctg aagaagatgg ctgtctcctt
     2101 cagtctatta atgaaattcc aaaaattgat ttgcgaaaat cagtttctat accaataaat
     2161 gtcattgatt ctgaaaagtg tgtagcggtt gatgactcag aatggagtaa gcacatcaaa
     2221 aaacaacaac agaaattccc ttccttaatc gaaatattgg attcaaaaca atgtcgcgag
     2281 ttgggaatca aagcgtcgtt acctcatgat gctgaagttt acgccgggga ctattcaccc
     2341 tgtgaaattg ttgctgtcgt tcgccctggt aactataaac cagggactgc ttccaaacga
     2401 ttggatcaaa aatttgtgat gaaagatgag tttgagatga cactaacaat cacatttttt
     2461 ggaactaaaa aatctaacga tggcattaat atatattctg gacgtgtaaa accttcttca
     2521 aaaggagact ttcaaggttt atacgttttt caaccaaaat ggaaggcaca tccgcttttt
     2581 cataaagctg gaaactatac attcacattt ttcatcagag attcaagttg tgagaaatgt
     2641 gtagtgaagg ttgaagttaa accacttgat gttcagagat ggggactttc gaaaacggtt
     2701 tctaatctca atttaacggt tggctgttct tgtgattcca tttctgtatc aatgtttgat
     2761 aaatttgaaa atcaacttcc atttttgaaa gttcccgagt tgctgatcga aatcaaatac
     2821 tcaaacgaga caaagtttca agtgaacaca tgtaaccctg ctaaatcttt ggataagtgg
     2881 gctctaataa ttcagggttt gcttattgag agctctagtt tggacaacat tcgaccaaca
     2941 tatgatgcca ctatgatgtt atgtcagcct gatggaacac acttgttaga tttcccaatt
     3001 aaagtgtttc ctggacccgt aaaaagtttt agagtgcaag aaaactttga gaagcaattg
     3061 attccggggc aagtaattaa agagtttact ttggagttgc tagatgcata tggaaatcat
     3121 gtacaagaag atgaaaaggt ggagttaagt ctgaatggat ttgattggtt gggcggatca
     3181 atttccagta aggtggatac ttttgggtac attcatcttg gtggcctaat aagagttact
     3241 gcaggctatg gaagaaatgt atcattgtca atatgctcaa atggagaacg tataagcaag
     3301 gaatggcaga ttgaaagaag gtttctgaga agtgtatcaa cgatacctga aagctgtttt
     3361 gtgggttcac aacttgaaaa catgaagttt gaagttgtaa atatggaggg cgaggtggat
     3421 gttaactttc atgatgagga tacgattggt caatctcata cacttgtaat taaatcagag
     3481 tttatggata tcgacgaatc tgtaaagtac gcttttcgtc aaggacgttg tgcagttcgt
     3541 gcgattcctg ttccttttga ggaaggggag tatagttttg ttgttgctca ttctcactat
     3601 ccagagcttc aattgactgt taaggttctc gttgagcaac ctcaagatat ggagcctcta
     3661 aatatcgtaa acctatctac caacgaagat attttccctc ttagaatcac agataataca
     3721 ccgattgact acaggagtgc gcaacactat actccagaga taaatacttc acccctactg
     3781 aatacatgtt attcgaatgt agtagaaact gaatcttgca cgcaatttca aaaggacctt
     3841 gagaacgaga ttgttgaatt tgctttcagt ataaggaaac atgaagagaa tatagagcta
     3901 ctcaattgtc agctaagaga aattgagtcc cagctgtcac aattggaggt ttgcagggac
     3961 caaactcgta gtattcacac atatggttca ccaacgaaaa atgaaattga agctcggatt
     4021 gaatcgaaga ctgacactgc tgctgctttt gtcttgaaac tattgaaaca attgtcaagt
     4081 gagtttcgac gtggcgttat gggaaatatt attggtgtcg ttgcacttct tggaacaact
     4141 cctactttcg agcttagcag aatatttgca gagtatcttg gtgatcagat acttggagtg
     4201 gtatgcaaat cgtatcagga tgtgagttta cttgagacct atgaagccaa tggacagtta
     4261 aatcgtacac atgcacttca catgttagca agagaactcg gtcaatctat caacggtcgt
     4321 tatcttgttt tatgcattga agatataagg gcatgtacgg tagataaaga tcttcaagga
     4381 aagcttcttt tgccagatcc cacctttcct gatggatcca ctccacaagg ttttgtgggt
     4441 tatgcagtaa acttgataga tatagatgtt gatcacttga acactaaaac tgatgctggt
     4501 tgtggtcttc gcgagacttt gttttatcgt ctttttgggg aaacacaagt ttataaaacc
     4561 agggaacaca tgaaaaatgc tattccttgc ataaaagatg gtgcagtttc tttagatggt
     4621 ggaattctaa gaggcaatgg tgtcacttct attggatgct tggaaccgga tatcatcttt
     4681 cctgtagttc ctgcaagaaa tcgtgtgcca tctcagcgtg acatggcagt tatgaggcgt
     4741 cacaaagaac tgatgctgaa acggaaagaa acgatggatg aactgattga aaagaagaaa
     4801 tctcttgaga gtgaacaaaa aaagttagcg aaaaaacgag ataaatttgt gaagtacttc
     4861 gcaaggaacc aatccgttgc tgccagctct caagtctctc ctatgatctg tttggaggcg
     4921 aaaccctttg ctacccaagg ttcatatgtt caaactcaaa ggttgtgaaa cacattcaag
     4981 aaacatccta aaacttgaat taatgtgggt tatttttgca tatataagtg gcttattatg
     5041 gatcttgttt tgacgtttat cttatctgga tgataagtaa atattttggg tgtgttttat
//
LOCUS       XM_071830080            1595 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein DEFECTIVE IN
            MERISTEM SILENCING 3 (LOC139839882), mRNA.
ACCESSION   XM_071830080
VERSION     XM_071830080.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1595
                     /gene="LOC139839882"
                     /note="protein DEFECTIVE IN MERISTEM SILENCING 3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139839882"
     CDS             1..1287
                     /gene="LOC139839882"
                     /codon_start=1
                     /product="protein DEFECTIVE IN MERISTEM SILENCING 3"
                     /protein_id="XP_071686181.1"
                     /db_xref="GeneID:139839882"
                     /translation="MFETFQAMIRPNALSVQVPSGVNYGGHNESPNVTNQGMENGAFS
                     LAEAIVNPSKKLENDMMLLGKKIKQHEDNIKFLKTHKNSLDDVITDTQVTLGKYHSST
                     APKIENDDLLHMQSEEATIGSIMKYEKSAAAIFCQLKRQRNQATQVKDILGVVATLGK
                     TTDDNLSRLLSEYVGLDNMMALVSMSYDGVKALVTYDKDGAIDTSAGVYGLATAIGQT
                     LEGRINLICLENTMPYVGDYLPNDPQKRLDIAKPRLPSGETPPGFIGFAVNMIHIDNA
                     HLFYLTHDGNGLRETLFYTLFSRLQVYKTRAEMLQALPCIYDGAVSLDGGIIKRSGVF
                     SLGTREEMNVKFPITSGVSYLPETYVQVEKDLKELKWKKERLMEDLQREESMLAHVKY
                     SFEIKKQEFIGFMAQSSPYTMQYPMQATPQGRSTPR"
     polyA_site      1595
                     /gene="LOC139839882"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgtttgaaa catttcaggc aatgattcgt ccgaatgcgt taagtgtaca agttccatca
       61 ggagtgaact atggcggtca caatgagtca cctaacgtta cgaatcaggg aatggagaat
      121 ggtgcattca gtctagcaga agcaattgtt aatccttcta agaaacttga gaatgatatg
      181 atgttacttg gaaagaagat taaacagcat gaagataaca ttaagttttt aaagactcat
      241 aagaacagct tagatgatgt aattacagat acacaagtta ctttgggaaa gtatcattca
      301 tcaactgcac ctaagataga gaatgatgat cttttacaca tgcaaagtga agaggcaaca
      361 attggaagta ttatgaaata cgagaaatca gctgctgcta ttttttgcca gctgaagcgt
      421 cagcgaaatc aggctactca ggtcaaagat attcttggtg ttgtagctac tcttgggaaa
      481 actactgatg ataatcttag caggctttta tcagagtacg ttgggctaga taatatgatg
      541 gcattagtga gcatgtcata tgatggcgtg aaagctctag taacgtatga taaagacggt
      601 gctatagata caagtgctgg tgtttatggc ttagcaactg ccataggaca gactttggag
      661 gggcgtatta atctcatctg tcttgaaaat acgatgccat atgtcggtga ttatctgcct
      721 aacgacccgc aaaagaggct cgacattgcg aaaccaagat taccaagtgg tgaaactcca
      781 ccagggttca ttggttttgc tgtcaatatg attcatattg ataatgcaca tttgttctat
      841 ctaacacacg atggcaacgg tttaagagag acgctttttt atactctctt ctcgcggctg
      901 caagtttata aaaccagggc agaaatgtta caggcccttc cttgcatata tgatggagcc
      961 gtctcattgg atggagggat tattaagagg agcggtgtat tttctcttgg cactcgggaa
     1021 gagatgaatg tgaaatttcc aataacttca ggagtttctt atttacctga gacatacgtt
     1081 caagttgaaa aagatctcaa ggaacttaag tggaaaaagg aaagattgat ggaagatcta
     1141 caaagggaag aatcaatgtt agcccatgtc aaatacagct ttgaaatcaa gaagcaagag
     1201 tttatcggtt tcatggcaca aagttcaccg tatacaatgc agtaccctat gcaagcaact
     1261 cctcaaggaa gatcgacccc tagataataa ttttgataat aaaagaatct aatcaaggtg
     1321 taagtttgag gctcaatagg aatttgttca atataatccg aatagagacc aaccaaatgg
     1381 gtcaagtcaa tgtagttaac gctttcttgc ttactagagg caggaaggct tgaagagatg
     1441 atgtggggca tcgatcattt tggattaacg ctttccccac tgcccaaaca aattgttgca
     1501 ttttggattg tttttatttg ggcattaaaa tcatgattat tttaggacct tgttgacgaa
     1561 gtatttgaaa ctactaccaa tggtgggttt tttta
//
LOCUS       XM_071830081            2606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like protease
            SBT1.8 (LOC139839883), mRNA.
ACCESSION   XM_071830081
VERSION     XM_071830081.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2606
                     /gene="LOC139839883"
                     /note="subtilisin-like protease SBT1.8; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 34 Proteins"
                     /db_xref="GeneID:139839883"
     CDS             147..2453
                     /gene="LOC139839883"
                     /codon_start=1
                     /product="subtilisin-like protease SBT1.8"
                     /protein_id="XP_071686182.1"
                     /db_xref="GeneID:139839883"
                     /translation="MDSSSCFIIMWLVVTTITIIYPSSCLGMKRTYIVQMNHHLKPSS
                     FVTHDDWYSHSLKSIESTTTTENAIILYSYTNAYHGFSASLDLNQVKALRQLDSVIGV
                     YEDTLYHLHTTRTPQFLGIDNELGLWSQQLNAASHDVIIGVLDTGVWPESKSFDDSAM
                     PAVPSRWRGECEQGEDFKATACNKKLIGARKFSKGFRLAAAGVISKERDSPRDQDGHG
                     THTSTTAAGVQVGNASLFGFASGTARGMAVHARVATYKVCWKTGCFGSDILAGMDRAI
                     ADGVDVLSMSLGGGSSPYYRDTIAIGAFKAMEKGVFVSCSAGNSGPSKSSLANVAPWI
                     MTVGAGTLDRDFPAYAILGNGKRVTGVSLYSGKGMGDEPVQLVYFPSNNNRSSSGNLC
                     MPGSLEQEAVRGKVVFCDRGVNPRVEKGQVVKDAGGIGMILGNTAESGEELVADSHTL
                     PAVAVGRKFGDEIREYLKTEGDNAKAVLSFGGTVLGVKPSPVVAAFSSRGPNMVTPQI
                     LKPDVIGPGVNILAGWSQGIGPTGLDTDTRKTQFNIMSGTSMSCPHISGLAALLKAAH
                     PEWSPSAIKSSLMTTAYTLDNTKSLLRDAAAGGQVSTPWAHGAGHVDLHKAISPGLIY
                     DITPQEYIAFVCSLGYDIKQVQAVVNRANVTCTKSLGDPGRLNYPSFSVVFGGKSRVV
                     RYTRQLTNVGPPGSVYDVTAEAPKGVQISIKPKRLVFKNVGDKMRYTVTFVSQKGGDN
                     GDAFGSITWKNAENQVRSPVAFGWSRLI"
     misc_feature    237..479
                     /gene="LOC139839883"
                     /note="Peptidase inhibitor I9; Region: Inhibitor_I9;
                     pfam05922"
                     /db_xref="CDD:428674"
     misc_feature    468..1895
                     /gene="LOC139839883"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; Region: Peptidases_S8_3; cd04852"
                     /db_xref="CDD:173795"
     misc_feature    order(579..581,795..797,948..950,1005..1007,1101..1103,
                     1791..1793)
                     /gene="LOC139839883"
                     /note="active site"
                     /db_xref="CDD:173795"
     misc_feature    order(579..581,795..797,1791..1793)
                     /gene="LOC139839883"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     misc_feature    1191..1553
                     /gene="LOC139839883"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     Region: PA_subtilisin_like; cd02120"
                     /db_xref="CDD:239035"
     misc_feature    1467..1475
                     /gene="LOC139839883"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]; other site"
                     /db_xref="CDD:239035"
     misc_feature    2142..2429
                     /gene="LOC139839883"
                     /note="Fibronectin type-III domain; Region: fn3_6;
                     pfam17766"
                     /db_xref="CDD:465493"
     polyA_site      2606
                     /gene="LOC139839883"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatgacagta gccctcttcc attctcattc gtccccatat ctctctttct ttgccagtgt
       61 gagcactaga tgtgctgctc atcatcccta aatacatttc acatttcata ataaataaat
      121 ataaataaaa aattaataaa ttatatatgg attcatcctc ttgttttatt attatgtggt
      181 tagtcgtcac aacaattaca attatttatc catcatcatg tttaggaatg aaacgaacat
      241 acatcgttca gatgaatcat catcttaaac cctcatcctt cgtcactcat gatgactggt
      301 actctcacag tctcaaatca attgaatcca ccaccaccac tgagaatgcc atcatccttt
      361 attcctacac aaacgcatat cacggtttct cagcatcact agatctaaat caggttaaag
      421 ccctccggca attggattcc gtaatcggtg tctacgagga taccctctac catctccaca
      481 ccactcgcac tcctcaattc ctaggtatcg ataatgaatt agggttatgg tctcaacaac
      541 tcaatgctgc ttctcatgac gtcatcatcg gagtactcga tactggtgtt tggccggaat
      601 ccaaaagctt tgacgattcc gcgatgcctg ctgttccgag tcgatggcgc ggcgagtgtg
      661 aacaaggtga ggattttaag gcaaccgctt gtaataagaa actcatcggt gcacgtaagt
      721 tttcaaaagg cttccgtttg gcagcagcag gggttatatc gaaagagaga gactcgccac
      781 gtgaccaaga cggtcatggg acacacactt ccacaaccgc agcgggagtc caagtaggta
      841 acgccagtct gtttggtttt gctagtggga cggcgcgtgg tatggcggtt cacgcgcgag
      901 tggccaccta taaagtttgt tggaaaacag gttgttttgg ttctgatatc ctggcaggca
      961 tggatcgtgc gattgcagac ggtgtagatg tgttgtctat gtcgttaggt ggaggttctt
     1021 ccccctatta tcgcgatacg attgccatag gtgcttttaa agccatggag aagggtgtgt
     1081 ttgtgtcgtg ttctgcaggt aatagtgggc cctcaaagtc atcgcttgcc aacgtggctc
     1141 cgtggataat gacagtgggt gctggtactt tagacagaga tttccctgcg tatgcgattt
     1201 taggaaatgg gaaacgtgtg acaggagtgt ctttgtatag tggaaaaggg atgggtgatg
     1261 aaccggttca attggtttat ttccctagta ataataatag atcttctagt ggtaatttgt
     1321 gtatgccggg ttcacttgaa caggaagctg ttcgtggtaa agtggtattt tgtgacagag
     1381 gtgtgaatcc acgtgttgaa aagggtcagg tagtgaaaga tgcgggtggg attgggatga
     1441 tacttgggaa cacggcagag agtggtgagg agttggtggc agatagtcat acgttgccgg
     1501 cggttgctgt tggaagaaag tttggggatg agataagaga gtatttgaaa acagagggtg
     1561 ataatgcaaa agcggtgtta agctttggag gaaccgtgtt gggggttaag ccatcgccag
     1621 tcgtggctgc atttagttcg agaggtccaa acatggtgac gccccaaata ttgaaaccag
     1681 acgtaattgg tcctggagtc aacatcttgg ctggatggtc acaaggaata ggacccaccg
     1741 gcttggatac cgatacccgc aaaacccaat tcaacattat gtcaggtaca tccatgtcct
     1801 gcccacatat cagcgggtta gcagcactgt tgaaagcagc acatccagaa tggagcccca
     1861 gcgccatcaa gtcttctctg atgaccaccg catacaccct tgacaacacc aaatccctcc
     1921 tccgtgatgc agctgctggt ggtcaagttt caactccatg ggcccatgga gcaggtcacg
     1981 ttgacctgca caaggccatc tctcctggtc ttatttatga tatcacacca caagagtaca
     2041 ttgcattcgt ttgctcctta ggctatgaca ttaagcaagt acaagctgtg gtcaaccgtg
     2101 caaatgtcac ttgtaccaaa tcactagggg accctggtcg attaaactac ccgtcattct
     2161 cggttgtttt tgggggcaag tcaagagtag tcagatacac ccgtcagcta accaatgttg
     2221 ggcctcctgg gtctgtttat gacgtcacag cagaagcacc aaaaggagtt caaattagta
     2281 ttaaaccaaa acggcttgtt ttcaagaatg tgggagataa gatgagatac acagttacat
     2341 tcgtctccca aaagggtggt gataacgggg atgcgtttgg ctctataact tggaaaaatg
     2401 ccgagaatca agttaggagc cctgttgctt ttgggtggtc aaggctcata taagatgtcg
     2461 ttactactgg cttcatagaa acctcacggg ccttgtttct tgtgtctcta aaaaactaat
     2521 gtaatgtgat gtaatagtag gtgtaattta ctacagtctg ccttaaggaa tgaaaaccaa
     2581 gagttttgct ttgaagaaat ctctca
//
LOCUS       XM_071830082            1261 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839884), mRNA.
ACCESSION   XM_071830082
VERSION     XM_071830082.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1261
                     /gene="LOC139839884"
                     /note="uncharacterized LOC139839884; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839884"
     CDS             623..1213
                     /gene="LOC139839884"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686183.1"
                     /db_xref="GeneID:139839884"
                     /translation="MGSPQGSGSPSLALPRPKSPPELYAKRRDLAKLVKLEREIGFLQ
                     EELKSIEKLQPASFCIKEVADYVVTNPEPLITICRKNHKSCGFWKWLCGNPCFRMSSI
                     CCCCGCCLETPSCCCCGSCSLPKCTCSFKPRCPSTCFCCPNCSDNCCPKCPDYSCRCK
                     CSCLCWPPKCSCPKLPKCSSCGCCSLNCCYSCCRCC"
     misc_feature    722..913
                     /gene="LOC139839884"
                     /note="GGL domain; Region: G-gamma; pfam00631"
                     /db_xref="CDD:459879"
ORIGIN      
        1 agtaatttaa gtttgattca tcttgttgta aaagtaaact agaatacggg tgtgttttga
       61 atgagaagcc tttacggagt aactttagcc ttttaggagg aggttatgaa ttgtggatat
      121 agagctagtg ttactcaaat acaagcttct actaattaga ttaacatttg gagtagtata
      181 ataataataa ttattgtaga aagtaataaa tagatgtagg taggtaggga aacaataaaa
      241 ttataattgt actccactac ttaggttagg gttctagtgt atgtaattgt aattgtgtgt
      301 atgtgtgtac caactaacca tcaccactac tcggctgtaa caacagaggt acaataatac
      361 attaccagtg ttaatttaat ggagtaaata aaaataaata ctcatacaat ttcataagtc
      421 acatacagcc actactgcta ctagtgtttt ctctctcacg gtgcaatttt tctgttctgg
      481 agagaaatgg atttatatgt atgtagtatg tatgtatata gttactaccg gtagtagagt
      541 agagaagaaa agagaagaga agagaagaga agagaagagt agagtagaat agagagtaga
      601 gtaattgagt gagttaactt tgatgggttc accccaagga tcaggatctc cgtcgttggc
      661 ccttcccaga cctaagtctc cgccggagtt gtacgccaaa cgaagagacc tcgctaagct
      721 tgtcaagttg gaaagagaaa ttggtttcct tcaggaagag ttaaagtcaa ttgaaaagct
      781 acagcctgca tctttttgca taaaagaggt cgccgattat gtggtcacaa atcctgaacc
      841 gttgatcact atatgtagga agaatcataa atcttgtggt ttctggaagt ggctatgtgg
      901 taatccctgc ttcagaatgt cctcgatttg ctgctgttgt ggctgttgtc ttgaaacacc
      961 aagctgctgt tgctgtggtt cctgctcact accaaagtgt acttgttctt ttaagccacg
     1021 gtgcccttca acttgtttct gttgccccaa ctgtagtgat aattgctgcc caaaatgtcc
     1081 agattacagt tgtcgctgca aatgtagttg cttatgttgg ccaccaaagt gctcgtgtcc
     1141 taaactccct aaatgttcaa gttgcggttg ttgtagccta aattgttgtt actcttgttg
     1201 tcgatgttgc taatgtataa ctatgaaatg ataataaaca tacagaatga gagatttctt
     1261 c
//
LOCUS       XM_071830083            2051 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CLP protease regulatory
            subunit CLPX1, mitochondrial (LOC139839885), transcript variant X1,
            mRNA.
ACCESSION   XM_071830083
VERSION     XM_071830083.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2051
                     /gene="LOC139839885"
                     /note="CLP protease regulatory subunit CLPX1,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 15 Proteins"
                     /db_xref="GeneID:139839885"
     CDS             211..1926
                     /gene="LOC139839885"
                     /codon_start=1
                     /product="CLP protease regulatory subunit CLPX1,
                     mitochondrial isoform X1"
                     /protein_id="XP_071686184.1"
                     /db_xref="GeneID:139839885"
                     /translation="MAAAALRSKSYKATSSLSPSLSQFRYFISTHRILPSTQVICSIP
                     TTNKLDNYIPQNHNHQHQSFRPFSISGELIVNNNSSSRKLVDNISGGGEYGEPPEVWQ
                     PPGGAGIVSQPGLKMVPVSSGVDPSIGGSGSGSGSADGSWGGSSLGNNFPTPKEICKG
                     LDKFVIGQERAKKVLAVAVYNHYKRISIDTSQKPAGHSRNDKTNMDDDEAVELEKSNI
                     LLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNV
                     AAAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHP
                     RGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGVTTAAVTS
                     TLLETVESSDLIAYGLIPEFVGRFPILVNLLALTENQLIQVLTEPKNALGKQYKKLFQ
                     MNGVKLHYTENALKLIARKAITKNTGARGLRALLENILMDAMFEIPDVRTGKDIIEAV
                     VVDEEAVGVNEKGCGAKILHGEGSFDRYLSQYAVKDTKADGVAEPETEADVEAETDLP
                     SIAAL"
     misc_feature    664..1755
                     /gene="LOC139839885"
                     /note="ATP-dependent protease Clp, ATPase subunit ClpX
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpX; COG1219"
                     /db_xref="CDD:440832"
     polyA_site      2051
                     /gene="LOC139839885"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gaaaaaaatc aacgtaacat cattctgttt gtatcttgaa tccaacaata gcaattccta
       61 accaaaaatt ttacaaattt cctcaaaaag atcatatctt tttcattttt ttttcttctc
      121 aaacccatgt tttcatgatt ctaaaagacc cacatatttc catcaaaatc gaatcttttt
      181 ccagttttta gaccttcatc atcaaccgcc atggctgcag ctgctctaag atcaaaatca
      241 tacaaagcaa catcatcttt atcaccatca ctttcacaat tcagatactt tatttcaact
      301 caccgcatat tacccagtac ccaagtcatt tgttcaattc caactaccaa taaattagac
      361 aattatatcc ctcaaaatca caatcaccaa catcaatcct tcagaccctt ttcaatctct
      421 ggcgaactta ttgttaataa taatagtagt agtaggaaat tagtggataa tatatctggt
      481 ggtggtgaat atggggaacc acctgaggtt tggcaacctc ctggtggagc tgggattgtt
      541 tctcagccgg gtcttaagat ggttccggtt tccagtgggg ttgacccgag tattggtggg
      601 tccggatccg gttcgggttc tgctgatggg agttggggtg ggtctagttt gggcaacaat
      661 ttcccaactc ctaaagagat ttgtaaaggc cttgataagt ttgtcattgg tcaagaaaga
      721 gcaaaaaagg tgcttgctgt ggcagtttac aaccattaca agaggatctc tattgacact
      781 tcacagaagc ctgcagggca ttcgagaaat gacaagacaa atatggatga tgatgaggca
      841 gtagaacttg aaaaaagtaa cattcttcta atgggtccaa ccggttcagg gaagacgcta
      901 ctcgcaaaaa cactggctcg cttggtaaat gttccatttg tcattgcaga tgctactaca
      961 ctcacccagg ctggttatgt tggggaagac gtcgagtcaa ttctatacaa gctcttgact
     1021 gttgctgatt ataacgtagc agccgctcag cagggcattg tgtatataga tgaagtcgac
     1081 aagataacaa agaaggctga aagtgttaat attagcagag atgtatcggg tgagggtgtg
     1141 cagcaggctt tattgaagat gctagaaggg actgttgtta atgtccctga aaagggggcg
     1201 cgaaaacatc ctagaggaga caatattcag attgatacca aagatatctt gtttatatgt
     1261 gggggtgcct tcatagatct tgaaaaaacc atttcagaaa gacgtcaaga ctcgtcgatt
     1321 gggtttgggg cacctgttcg tgctaacatg agagccggag gtgttacaac tgcagctgtg
     1381 acttcaacct tgttggaaac tgtcgaaagt agtgatctta ttgcttatgg tttgatacct
     1441 gaattcgttg gacgatttcc aattcttgtc aacttattag ctcttaccga gaatcaactt
     1501 atccaggtgc taactgagcc gaaaaatgcg ttaggcaaac aatacaagaa gttatttcag
     1561 atgaatggag ttaagctaca ttataccgaa aatgcgttga aattaattgc gaggaaagca
     1621 ataactaaga acacgggtgc tcggggttta agggcgttac tggagaacat attgatggac
     1681 gccatgtttg agattcctga tgtgagaaca ggtaaagata taatagaagc tgtggtggtt
     1741 gatgaggagg ctgttggggt taacgaaaag ggttgcggtg ctaaaatcct tcacggtgaa
     1801 ggttcatttg accgttatct gtcacaatat gcagtcaaag atacgaaggc ggacggtgta
     1861 gccgagcccg agacggaagc tgacgtggag gcagagacgg atttgccttc tattgctgct
     1921 ttgtaaatca cactggcaga tgctatagat agtatctcca tatgcatgta catataatat
     1981 gtactaattt aattaatctc taatgagaaa caaatacatc taataagtaa attttatgtt
     2041 ggatgcttca a
//
LOCUS       XM_071830084            1699 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CLP protease regulatory
            subunit CLPX1, mitochondrial (LOC139839885), transcript variant X2,
            mRNA.
ACCESSION   XM_071830084
VERSION     XM_071830084.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1699
                     /gene="LOC139839885"
                     /note="CLP protease regulatory subunit CLPX1,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139839885"
     CDS             135..1574
                     /gene="LOC139839885"
                     /codon_start=1
                     /product="CLP protease regulatory subunit CLPX1,
                     mitochondrial isoform X2"
                     /protein_id="XP_071686185.1"
                     /db_xref="GeneID:139839885"
                     /translation="MGNHLRFGNLLVELGLFLSRVLRWFRFPVGLTRVLVGPDPVRVL
                     LMGVGVGLVWATISQLLKRFVKALISLSLVKKEQKRCLLWQFTTITRGSLLTLHRIRP
                     AGHSRNDKTNMDDDEAVELEKSNILLMGPTGSGKTLLAKTLARLVNVPFVIADATTLT
                     QAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESVNISRDVSGEGV
                     QQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDS
                     SIGFGAPVRANMRAGGVTTAAVTSTLLETVESSDLIAYGLIPEFVGRFPILVNLLALT
                     ENQLIQVLTEPKNALGKQYKKLFQMNGVKLHYTENALKLIARKAITKNTGARGLRALL
                     ENILMDAMFEIPDVRTGKDIIEAVVVDEEAVGVNEKGCGAKILHGEGSFDRYLSQYAV
                     KDTKADGVAEPETEADVEAETDLPSIAAL"
     misc_feature    <468..1403
                     /gene="LOC139839885"
                     /note="ATP-dependent protease Clp, ATPase subunit ClpX
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpX; COG1219"
                     /db_xref="CDD:440832"
     polyA_site      1699
                     /gene="LOC139839885"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agacaattat atccctcaaa atcacaatca ccaacatcaa tccttcagac ccttttcaat
       61 ctctggcgaa cttattgtta ataataatag tagtagtagg aaattagtgg ataatatatc
      121 tggtggtggt gaatatgggg aaccacctga ggtttggcaa cctcctggtg gagctgggat
      181 tgtttctcag ccgggtctta agatggttcc ggtttccagt ggggttgacc cgagtattgg
      241 tgggtccgga tccggttcgg gttctgctga tgggagttgg ggtgggtcta gtttgggcaa
      301 caatttccca actcctaaag agatttgtaa aggccttgat aagtttgtca ttggtcaaga
      361 aagagcaaaa aaggtgcttg ctgtggcagt ttacaaccat tacaagagga tctctattga
      421 cacttcacag aattaggcct gcagggcatt cgagaaatga caagacaaat atggatgatg
      481 atgaggcagt agaacttgaa aaaagtaaca ttcttctaat gggtccaacc ggttcaggga
      541 agacgctact cgcaaaaaca ctggctcgct tggtaaatgt tccatttgtc attgcagatg
      601 ctactacact cacccaggct ggttatgttg gggaagacgt cgagtcaatt ctatacaagc
      661 tcttgactgt tgctgattat aacgtagcag ccgctcagca gggcattgtg tatatagatg
      721 aagtcgacaa gataacaaag aaggctgaaa gtgttaatat tagcagagat gtatcgggtg
      781 agggtgtgca gcaggcttta ttgaagatgc tagaagggac tgttgttaat gtccctgaaa
      841 agggggcgcg aaaacatcct agaggagaca atattcagat tgataccaaa gatatcttgt
      901 ttatatgtgg gggtgccttc atagatcttg aaaaaaccat ttcagaaaga cgtcaagact
      961 cgtcgattgg gtttggggca cctgttcgtg ctaacatgag agccggaggt gttacaactg
     1021 cagctgtgac ttcaaccttg ttggaaactg tcgaaagtag tgatcttatt gcttatggtt
     1081 tgatacctga attcgttgga cgatttccaa ttcttgtcaa cttattagct cttaccgaga
     1141 atcaacttat ccaggtgcta actgagccga aaaatgcgtt aggcaaacaa tacaagaagt
     1201 tatttcagat gaatggagtt aagctacatt ataccgaaaa tgcgttgaaa ttaattgcga
     1261 ggaaagcaat aactaagaac acgggtgctc ggggtttaag ggcgttactg gagaacatat
     1321 tgatggacgc catgtttgag attcctgatg tgagaacagg taaagatata atagaagctg
     1381 tggtggttga tgaggaggct gttggggtta acgaaaaggg ttgcggtgct aaaatccttc
     1441 acggtgaagg ttcatttgac cgttatctgt cacaatatgc agtcaaagat acgaaggcgg
     1501 acggtgtagc cgagcccgag acggaagctg acgtggaggc agagacggat ttgccttcta
     1561 ttgctgcttt gtaaatcaca ctggcagatg ctatagatag tatctccata tgcatgtaca
     1621 tataatatgt actaatttaa ttaatctcta atgagaaaca aatacatcta ataagtaaat
     1681 tttatgttgg atgcttcaa
//
LOCUS       XM_071830085            1453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            SINAT5-like (LOC139839886), mRNA.
ACCESSION   XM_071830085
VERSION     XM_071830085.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1453
                     /gene="LOC139839886"
                     /note="E3 ubiquitin-protein ligase SINAT5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 55 Proteins"
                     /db_xref="GeneID:139839886"
     CDS             360..1364
                     /gene="LOC139839886"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase SINAT5-like"
                     /protein_id="XP_071686186.1"
                     /db_xref="GeneID:139839886"
                     /translation="MDLDNIECVSSSDGLDDEEVHPQITHHQFSSKPHTITNSNNTIN
                     NNNNNNNLGIALPPGLTPTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKIRVQN
                     RCPTCRQELGDIRCLALEKVAESLELPCRYISLGCPEIFPYYSKLKHEALCNFRPYNC
                     PYAGSECSVTGDIPFLVTHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHC
                     FGQYFCLHFEAFQLGMAPVYMAFLRFMGDEADARNYSYSLEVGANGRKLTWEGTPRSI
                     RDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGKIWKEQQNHEAGVCIPNLCS
                     "
     misc_feature    567..683
                     /gene="LOC139839886"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; Region: RING-HC_SIAHs; cd16571"
                     /db_xref="CDD:438233"
     misc_feature    699..1298
                     /gene="LOC139839886"
                     /note="Seven in absentia protein family; Region: Sina;
                     pfam03145"
                     /db_xref="CDD:460824"
ORIGIN      
        1 taaaataaaa atccattatc ccacgtatat cagccgtccg attattgtat ctcaatagtt
       61 tcaaaaacaa attcaacggc aatcatcatt ttacacaaat aataaaattt tagagagaga
      121 gacgaaagaa aaacccatta ttttacagaa aagaaggggg ggtttgtttg tttaatccca
      181 aaatcgatct gttttcatca ctttctgttt gacatttatc ttgaaatata tggacatcag
      241 aaggtaaagt ttgaatcttt tctcagattc ctgacttggg ttttcgttgg atttgtaaga
      301 ttgattcaaa aatttgaatc ttttcaattg gggtttgtga aatcaagaaa cagaggatta
      361 tggatttgga taatattgag tgtgtttctt cttcagatgg attagatgat gaagaggtcc
      421 atccccaaat tacacatcat caattttcat caaagcctca tacaatcacc aatagtaata
      481 atactatcaa taataataat aataataata atttgggaat cgctcttccc cctggtttga
      541 ctcctacaac aagtgttcat gaattgttgg aatgcccagt ttgtactaat tctatgtacc
      601 ctccaattca tcagtgtcac aacggacaca cgttatgttc aacctgtaaa atacgagtgc
      661 aaaaccgatg tccaacatgc agacaggaat tgggcgatat cagatgctta gcgttggaaa
      721 aagttgcaga atcactcgaa cttccttgca gatatatctc gttggggtgt cctgaaatat
      781 tcccgtatta cagcaaactt aagcatgaag cgttgtgcaa tttcaggccg tataattgcc
      841 cgtatgctgg ttcagagtgc tcggttacag gagacatacc ttttctggtt acacatctta
      901 gagatgatca taaagtagat atgcacacgg gttgtacgtt taaccatcgt tatgtcaagt
      961 ctaatccccg tgaagttgaa aacgccacct ggatgcttac ggtattccat tgttttgggc
     1021 agtacttctg cctgcatttc gaagcgtttc agttaggaat ggcaccagtt tacatggcgt
     1081 ttttacgctt catgggtgac gaagcggacg cacgcaacta cagctacagt ttagaagtcg
     1141 gagcaaacgg gcggaaactt acgtgggaag gaacacctag aagcatccga gatagccatc
     1201 gaaaggtacg tgacagtcac gatggactca ttattcaaag aaatatggcg cttttcttct
     1261 cgggtggaga taggaaggaa cttaaactca gagttacggg taagatatgg aaggaacaac
     1321 agaatcatga agctggtgtt tgtattccaa atctttgtag ttgagatttt gtgttttgtg
     1381 ttgatgatct tcatttgaat gtgaatgtga atgtgaattg tgaattgtga attgtgaatt
     1441 tcgaatgtga atg
//
LOCUS       XM_071830086            1507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides spermine synthase
            (LOC139839887), transcript variant X1, mRNA.
ACCESSION   XM_071830086
VERSION     XM_071830086.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1507
                     /gene="LOC139839887"
                     /note="spermine synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839887"
     CDS             173..1333
                     /gene="LOC139839887"
                     /codon_start=1
                     /product="spermine synthase isoform X1"
                     /protein_id="XP_071686187.1"
                     /db_xref="GeneID:139839887"
                     /translation="MGGDAGRDLGCQKNMDGKVNEDAIPSCCLKARACVPDPELEANC
                     HATVVSGWFSQPQSSSDEVGKRMYFNNPMWPGEAHSLAVENILFKEKSEYQEVLVFES
                     VTYGKVLVLDGILQLTEKDECAYQEMIAHLPLCSIKSPKNARIIVFCVAYQSSTYLCF
                     ISNMLWSKTNSYWCLQVLVVGGGDGGVLREISRHSSVELIDICEIDKMVIDVGKKFFP
                     ELAVGFEDPRVHLHVGDAVEFIRNIPEGKYDAIIVDSSDPVGPAQELVERPFFEMLAR
                     ALRPGGVLCNMAESMWLHTHLIQDMISVCQKIFKNVHYAWTSVPTYPSGVIGFILCST
                     EGPPVDFRNPVNPIEKLEGALEHQRELRFYNSQMHRAAFALPPFVKKEVKGL"
     misc_feature    278..1330
                     /gene="LOC139839887"
                     /note="spermidine synthase; Region: PLN02366"
                     /db_xref="CDD:215208"
     polyA_site      1507
                     /gene="LOC139839887"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccccaaccct ctttgttttc tgcgcatttt cgttcttttt acgctctctt tttgttacct
       61 aatcacctaa attacgtata caaatcttat atctatatat atccattaac aattatacag
      121 tcagaactga ctctatcaca gaggctggag ctggagaaga aaaggcgaaa atatgggggg
      181 agacgcagga agagatttgg gatgccagaa gaatatggat gggaaggtga atgaggatgc
      241 tattccttca tgttgtttga aagcccgagc atgtgtaccc gatcctgaac ttgaagcaaa
      301 ttgtcatgct acggttgttt ccggatggtt ctctcaaccg cagtcttctt ccgatgaagt
      361 gggaaaaaga atgtacttca acaaccccat gtggccaggg gaagcacatt cattggctgt
      421 agaaaatatt ttgttcaagg agaagtcaga gtatcaagag gtcctggttt tcgagtctgt
      481 aacctatgga aaagtacttg ttcttgatgg cattcttcag ctgactgaga aagatgaatg
      541 cgcttatcag gagatgatag cccatctccc tctttgttcc atcaaatcac cgaaaaatgc
      601 aaggatcatt gtcttttgtg ttgcttacca gtcatcaaca tatttatgtt ttataagtaa
      661 tatgttatgg tcaaaaacta attcttattg gtgtctacag gttctagtgg tgggtggtgg
      721 cgatggcggg gttctgaggg aaatttctcg ccacagctct gtagagttga ttgatatttg
      781 tgaaatagat aagatggtta tagatgttgg taagaagttt ttccctgagt tagctgttgg
      841 ctttgaggat cctcgtgttc atcttcatgt tggtgatgct gttgagttta tacgaaatat
      901 tcctgaagga aagtatgatg ccattattgt tgattcttct gatcccgtcg gtcctgccca
      961 agaactagtt gaaaggccgt tctttgagat gttagcacga gcattaagac ctggtggtgt
     1021 tctttgtaac atggccgaga gcatgtggct ccacactcat cttattcagg atatgatctc
     1081 ggtttgccaa aaaatattca agaatgttca ttatgcatgg acaagtgtcc ccacatatcc
     1141 gagtggtgtt attggattta tactgtgttc aacggaggga ccacctgttg attttaggaa
     1201 ccctgtaaac cctattgaga agctagaggg agcactagag catcagagag aacttagatt
     1261 ctacaactct cagatgcata gagctgcgtt tgccttgcca ccatttgtca aaaaggaggt
     1321 gaaaggtctt tgaaggattt cattagttcc ctcatatgcg tgtttggatt tatgtgtctc
     1381 gtatttaaat gttaaagtgt aaacaactca ccatattgga tttgtcgtac catgcagtcg
     1441 aaataatatg gttattaaca agatatggcc ttttattatt tatgttatat aaatccgatt
     1501 tgtgttt
//
LOCUS       XM_071830087            1405 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides spermine synthase
            (LOC139839887), transcript variant X2, mRNA.
ACCESSION   XM_071830087
VERSION     XM_071830087.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1405
                     /gene="LOC139839887"
                     /note="spermine synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839887"
     CDS             173..1231
                     /gene="LOC139839887"
                     /codon_start=1
                     /product="spermine synthase isoform X2"
                     /protein_id="XP_071686188.1"
                     /db_xref="GeneID:139839887"
                     /translation="MGGDAGRDLGCQKNMDGKVNEDAIPSCCLKARACVPDPELEANC
                     HATVVSGWFSQPQSSSDEVGKRMYFNNPMWPGEAHSLAVENILFKEKSEYQEVLVFES
                     VTYGKVLVLDGILQLTEKDECAYQEMIAHLPLCSIKSPKNVLVVGGGDGGVLREISRH
                     SSVELIDICEIDKMVIDVGKKFFPELAVGFEDPRVHLHVGDAVEFIRNIPEGKYDAII
                     VDSSDPVGPAQELVERPFFEMLARALRPGGVLCNMAESMWLHTHLIQDMISVCQKIFK
                     NVHYAWTSVPTYPSGVIGFILCSTEGPPVDFRNPVNPIEKLEGALEHQRELRFYNSQM
                     HRAAFALPPFVKKEVKGL"
     misc_feature    278..1228
                     /gene="LOC139839887"
                     /note="spermidine synthase; Region: PLN02366"
                     /db_xref="CDD:215208"
     polyA_site      1405
                     /gene="LOC139839887"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccccaaccct ctttgttttc tgcgcatttt cgttcttttt acgctctctt tttgttacct
       61 aatcacctaa attacgtata caaatcttat atctatatat atccattaac aattatacag
      121 tcagaactga ctctatcaca gaggctggag ctggagaaga aaaggcgaaa atatgggggg
      181 agacgcagga agagatttgg gatgccagaa gaatatggat gggaaggtga atgaggatgc
      241 tattccttca tgttgtttga aagcccgagc atgtgtaccc gatcctgaac ttgaagcaaa
      301 ttgtcatgct acggttgttt ccggatggtt ctctcaaccg cagtcttctt ccgatgaagt
      361 gggaaaaaga atgtacttca acaaccccat gtggccaggg gaagcacatt cattggctgt
      421 agaaaatatt ttgttcaagg agaagtcaga gtatcaagag gtcctggttt tcgagtctgt
      481 aacctatgga aaagtacttg ttcttgatgg cattcttcag ctgactgaga aagatgaatg
      541 cgcttatcag gagatgatag cccatctccc tctttgttcc atcaaatcac cgaaaaatgt
      601 tctagtggtg ggtggtggcg atggcggggt tctgagggaa atttctcgcc acagctctgt
      661 agagttgatt gatatttgtg aaatagataa gatggttata gatgttggta agaagttttt
      721 ccctgagtta gctgttggct ttgaggatcc tcgtgttcat cttcatgttg gtgatgctgt
      781 tgagtttata cgaaatattc ctgaaggaaa gtatgatgcc attattgttg attcttctga
      841 tcccgtcggt cctgcccaag aactagttga aaggccgttc tttgagatgt tagcacgagc
      901 attaagacct ggtggtgttc tttgtaacat ggccgagagc atgtggctcc acactcatct
      961 tattcaggat atgatctcgg tttgccaaaa aatattcaag aatgttcatt atgcatggac
     1021 aagtgtcccc acatatccga gtggtgttat tggatttata ctgtgttcaa cggagggacc
     1081 acctgttgat tttaggaacc ctgtaaaccc tattgagaag ctagagggag cactagagca
     1141 tcagagagaa cttagattct acaactctca gatgcataga gctgcgtttg ccttgccacc
     1201 atttgtcaaa aaggaggtga aaggtctttg aaggatttca ttagttccct catatgcgtg
     1261 tttggattta tgtgtctcgt atttaaatgt taaagtgtaa acaactcacc atattggatt
     1321 tgtcgtacca tgcagtcgaa ataatatggt tattaacaag atatggcctt ttattattta
     1381 tgttatataa atccgatttg tgttt
//
LOCUS       XM_071830088            1360 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides spermine synthase
            (LOC139839887), transcript variant X3, mRNA.
ACCESSION   XM_071830088
VERSION     XM_071830088.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1360
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1360
                     /gene="LOC139839887"
                     /note="spermine synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839887"
     CDS             173..1186
                     /gene="LOC139839887"
                     /codon_start=1
                     /product="spermine synthase isoform X3"
                     /protein_id="XP_071686189.1"
                     /db_xref="GeneID:139839887"
                     /translation="MGGDAGRDLGCQKNMDGKVNEDAIPSCCLKARACVPDPELEANC
                     HATVVSGWFSQPQSSSDEVGKRMYFNNPMWPGEAHSLAVENILFKEKSEYQEVLVFEL
                     TEKDECAYQEMIAHLPLCSIKSPKNVLVVGGGDGGVLREISRHSSVELIDICEIDKMV
                     IDVGKKFFPELAVGFEDPRVHLHVGDAVEFIRNIPEGKYDAIIVDSSDPVGPAQELVE
                     RPFFEMLARALRPGGVLCNMAESMWLHTHLIQDMISVCQKIFKNVHYAWTSVPTYPSG
                     VIGFILCSTEGPPVDFRNPVNPIEKLEGALEHQRELRFYNSQMHRAAFALPPFVKKEV
                     KGL"
     misc_feature    278..1183
                     /gene="LOC139839887"
                     /note="spermidine synthase; Region: PLN02366"
                     /db_xref="CDD:215208"
     polyA_site      1360
                     /gene="LOC139839887"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccccaaccct ctttgttttc tgcgcatttt cgttcttttt acgctctctt tttgttacct
       61 aatcacctaa attacgtata caaatcttat atctatatat atccattaac aattatacag
      121 tcagaactga ctctatcaca gaggctggag ctggagaaga aaaggcgaaa atatgggggg
      181 agacgcagga agagatttgg gatgccagaa gaatatggat gggaaggtga atgaggatgc
      241 tattccttca tgttgtttga aagcccgagc atgtgtaccc gatcctgaac ttgaagcaaa
      301 ttgtcatgct acggttgttt ccggatggtt ctctcaaccg cagtcttctt ccgatgaagt
      361 gggaaaaaga atgtacttca acaaccccat gtggccaggg gaagcacatt cattggctgt
      421 agaaaatatt ttgttcaagg agaagtcaga gtatcaagag gtcctggttt tcgagctgac
      481 tgagaaagat gaatgcgctt atcaggagat gatagcccat ctccctcttt gttccatcaa
      541 atcaccgaaa aatgttctag tggtgggtgg tggcgatggc ggggttctga gggaaatttc
      601 tcgccacagc tctgtagagt tgattgatat ttgtgaaata gataagatgg ttatagatgt
      661 tggtaagaag tttttccctg agttagctgt tggctttgag gatcctcgtg ttcatcttca
      721 tgttggtgat gctgttgagt ttatacgaaa tattcctgaa ggaaagtatg atgccattat
      781 tgttgattct tctgatcccg tcggtcctgc ccaagaacta gttgaaaggc cgttctttga
      841 gatgttagca cgagcattaa gacctggtgg tgttctttgt aacatggccg agagcatgtg
      901 gctccacact catcttattc aggatatgat ctcggtttgc caaaaaatat tcaagaatgt
      961 tcattatgca tggacaagtg tccccacata tccgagtggt gttattggat ttatactgtg
     1021 ttcaacggag ggaccacctg ttgattttag gaaccctgta aaccctattg agaagctaga
     1081 gggagcacta gagcatcaga gagaacttag attctacaac tctcagatgc atagagctgc
     1141 gtttgccttg ccaccatttg tcaaaaagga ggtgaaaggt ctttgaagga tttcattagt
     1201 tccctcatat gcgtgtttgg atttatgtgt ctcgtattta aatgttaaag tgtaaacaac
     1261 tcaccatatt ggatttgtcg taccatgcag tcgaaataat atggttatta acaagatatg
     1321 gccttttatt atttatgtta tataaatccg atttgtgttt
//
LOCUS       XM_071830089            1878 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polypyrimidine tract-binding
            protein homolog 2-like (LOC139839889), transcript variant X1, mRNA.
ACCESSION   XM_071830089
VERSION     XM_071830089.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1878
                     /gene="LOC139839889"
                     /note="polypyrimidine tract-binding protein homolog
                     2-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139839889"
     CDS             176..1519
                     /gene="LOC139839889"
                     /codon_start=1
                     /product="polypyrimidine tract-binding protein homolog
                     2-like isoform X1"
                     /protein_id="XP_071686190.1"
                     /db_xref="GeneID:139839889"
                     /translation="MASVSSQPQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGKV
                     VNTKCNVGANRNQAFIEFVDQNQAIAMISYYASSSEPAQVRGKTVYLQYSNRHEIVNN
                     KTSADVAGNVLLVTIEGNDARSVSIDVLHLVFSAFGFVHKITTFEKTAGFQALIQFTD
                     SETATSAKDALDGRSIPRYLIPELGPCSLKITYSAHTDLSVKFQSHRSRDYTNPMLPV
                     ASSAIDASGQFNLAIDGKKIESESNVLLASIENMQYAVTIDVLQTVFSSFGPVLKIAM
                     FDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDGGFCKLHISYSRHTDLSIKINNDRS
                     RDYTMPAVPMMNPQPSILGQQPPSAVPQYNTAQYMPGPEGYAAPQSMPMQQTQGWVPG
                     PPSGPAGPQSMPMQQAHNHPYMPQQGMPPQMGPGPNHYNGQNGYPQGGVPPRYHL"
     misc_feature    221..463
                     /gene="LOC139839889"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     polypyrimidine tract-binding protein homolog 1 and 2
                     (PTBPH1 and PTBPH2); Region: RRM1_PTBPH1_PTBPH2; cd12686"
                     /db_xref="CDD:410087"
     misc_feature    order(236..238,242..247,317..319,323..325,338..346,
                     350..352,449..463)
                     /gene="LOC139839889"
                     /note="putative RNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:410087"
     misc_feature    503..784
                     /gene="LOC139839889"
                     /note="RNA recognition motif 2 (RRM2) found in plant
                     polypyrimidine tract-binding protein homolog 1 and 2
                     (PTBPH1 and PTBPH2); Region: RRM2_PTBPH1_PTBPH2; cd12691"
                     /db_xref="CDD:241135"
     misc_feature    order(515..517,521..523,605..607,611..613,617..619,
                     632..634,638..640,743..745,752..757,770..784)
                     /gene="LOC139839889"
                     /note="putative RNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:241135"
     misc_feature    899..1189
                     /gene="LOC139839889"
                     /note="RNA recognition motif 3 (RRM3) found in plant
                     polypyrimidine tract-binding protein homolog 1 and 2
                     (PTBPH1 and PTBPH2); Region: RRM3_PTBPH1_PTBPH2; cd12690"
                     /db_xref="CDD:410091"
     misc_feature    order(911..913,917..919,998..1000,1004..1006,1010..1012,
                     1025..1027,1031..1033,1121..1123,1130..1135,1148..1162)
                     /gene="LOC139839889"
                     /note="putative RNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:410091"
     misc_feature    <1214..>1507
                     /gene="LOC139839889"
                     /note="Topoisomerase II-associated protein PAT1; Region:
                     PAT1; pfam09770"
                     /db_xref="CDD:401645"
ORIGIN      
        1 tagtttgaca atcaaattac cctactacta gtaactcatc atcgctgtgg tatccatctg
       61 ccgactccaa atcaaccccc aatttctttt actttcaaac cctagttttc cgtctgcaac
      121 acattcttca tcatcgtctc tatatctaca agaactaacg tttttttagt gtgaaatggc
      181 atctgtttca agtcaacctc agtttcggta cacacagacc ccatcgaagg ttcttcattt
      241 gagaaatttg ccatgggagt gcactgaaga ggaactgatt gaactcggta agccgtttgg
      301 taaagtagtc aacaccaagt gtaatgttgg agcaaacaga aatcaagcct tcattgaatt
      361 tgttgatcaa aatcaagcaa ttgcaatgat atcatattat gcttcgtcat cagaacccgc
      421 tcaggtacga gggaaaaccg tctacctaca atattcaaac aggcatgaaa tcgtgaacaa
      481 caaaacctct gctgatgttg ctgggaatgt acttttggta accattgagg gcaatgatgc
      541 ccgctctgtc agcattgatg tgttgcacct ggtgttctct gcgtttgggt ttgtgcataa
      601 aattacaact tttgagaaga cagctggatt ccaggctcta atccagttta cagattcaga
      661 aactgctacg tctgcaaaag atgctcttga cggaaggagt ataccaaggt atttgattcc
      721 agagctaggg ccttgttctc taaagataac ttattctgca catacagatt tgagtgtaaa
      781 gtttcagagt catcgtagca gggactatac caaccctatg cttccggtcg catcctctgc
      841 aatagatgca agtggtcagt tcaatctggc tatagatggg aagaagattg aatctgagag
      901 taatgttctt cttgcttcaa tcgagaacat gcagtatgca gtcacaattg atgtgttaca
      961 gacggtgttc tcttcttttg gacctgtttt gaagattgcc atgtttgaca aaaatggagg
     1021 agtccaagct ttgattcagt accctgatgt tcagacagct gtggctgcca aggaagcctt
     1081 ggaaggtcac tgcatatacg atggagggtt ttgcaagctt cacatctcgt attctcggca
     1141 cactgattta agtattaaga tcaacaatga ccggagtaga gattacacga tgcctgctgt
     1201 gccgatgatg aacccacagc cttcgatctt ggggcaacaa ccaccgtcag ctgtccctca
     1261 gtacaacacc gcgcagtaca tgccgggtcc agaaggatat gcagctcctc aatccatgcc
     1321 aatgcagcag acacagggct gggttccagg tccaccatca ggaccagcag ggcctcaatc
     1381 catgccaatg cagcaggctc ataatcaccc ttacatgccg cagcagggca tgcctcctca
     1441 aatgggtccg ggccctaatc attacaatgg tcagaatggc tacccacaag gtggtgtccc
     1501 acctcgttac catctataga attcttctct ctttggactt ccttgctctt tcttgtgttt
     1561 ttatttcata ttgtcgagat tggtttgtta tctagttgtt aaagcgggct gcaaggggta
     1621 ccgtttgaga ccatattaca gctttatgcc tttatctcca ttttgtcttc tgaacatttt
     1681 gcttggactt ctgaattcat tggagactgg cttggtgatc tattcatttt agtatgtcat
     1741 caaaatgcaa cattttggtc caccaactcc aaacacacaa aaatgtctga gctaaatctt
     1801 tttttgattc tttttacaat aaagcaatat attgtaacta aaatggtaat taacagagac
     1861 tttcttcatt cgttggcg
//
LOCUS       XM_071830090            1556 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polypyrimidine tract-binding
            protein homolog 2-like (LOC139839889), transcript variant X2, mRNA.
ACCESSION   XM_071830090
VERSION     XM_071830090.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1556
                     /gene="LOC139839889"
                     /note="polypyrimidine tract-binding protein homolog
                     2-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139839889"
     CDS             150..1196
                     /gene="LOC139839889"
                     /codon_start=1
                     /product="polypyrimidine tract-binding protein homolog
                     2-like isoform X2"
                     /protein_id="XP_071686191.1"
                     /db_xref="GeneID:139839889"
                     /translation="MMPALSALMCCTCRPISRIYLRWQLIAWRERAHVFSAFGFVHKI
                     TTFEKTAGFQALIQFTDSETATSAKDALDGRSIPRYLIPELGPCSLKITYSAHTDLSV
                     KFQSHRSRDYTNPMLPVASSAIDASGQFNLAIDGKKIESESNVLLASIENMQYAVTID
                     VLQTVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDGGFCKLHI
                     SYSRHTDLSIKINNDRSRDYTMPAVPMMNPQPSILGQQPPSAVPQYNTAQYMPGPEGY
                     AAPQSMPMQQTQGWVPGPPSGPAGPQSMPMQQAHNHPYMPQQGMPPQMGPGPNHYNGQ
                     NGYPQGGVPPRYHL"
     misc_feature    <249..461
                     /gene="LOC139839889"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    576..866
                     /gene="LOC139839889"
                     /note="RNA recognition motif 3 (RRM3) found in plant
                     polypyrimidine tract-binding protein homolog 1 and 2
                     (PTBPH1 and PTBPH2); Region: RRM3_PTBPH1_PTBPH2; cd12690"
                     /db_xref="CDD:410091"
     misc_feature    order(588..590,594..596,675..677,681..683,687..689,
                     702..704,708..710,798..800,807..812,825..839)
                     /gene="LOC139839889"
                     /note="putative RNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:410091"
     misc_feature    <891..>1184
                     /gene="LOC139839889"
                     /note="Topoisomerase II-associated protein PAT1; Region:
                     PAT1; pfam09770"
                     /db_xref="CDD:401645"
ORIGIN      
        1 aatgatatca tattatgctt cgtcatcaga acccgctcag gtacgaggga aaaccgtcta
       61 cctacaatat tcaaacaggc atgaaatcgt gaacaacaaa acctctgctg atgttgctgg
      121 gaatgtactt ttggtaacca ttgagggcaa tgatgcccgc tctgtcagca ttgatgtgtt
      181 gcacctgcag gcccatatca aggatttatc ttcgatggca gcttattgct tggagagaaa
      241 gagcgcatgt gttctctgcg tttgggtttg tgcataaaat tacaactttt gagaagacag
      301 ctggattcca ggctctaatc cagtttacag attcagaaac tgctacgtct gcaaaagatg
      361 ctcttgacgg aaggagtata ccaaggtatt tgattccaga gctagggcct tgttctctaa
      421 agataactta ttctgcacat acagatttga gtgtaaagtt tcagagtcat cgtagcaggg
      481 actataccaa ccctatgctt ccggtcgcat cctctgcaat agatgcaagt ggtcagttca
      541 atctggctat agatgggaag aagattgaat ctgagagtaa tgttcttctt gcttcaatcg
      601 agaacatgca gtatgcagtc acaattgatg tgttacagac ggtgttctct tcttttggac
      661 ctgttttgaa gattgccatg tttgacaaaa atggaggagt ccaagctttg attcagtacc
      721 ctgatgttca gacagctgtg gctgccaagg aagccttgga aggtcactgc atatacgatg
      781 gagggttttg caagcttcac atctcgtatt ctcggcacac tgatttaagt attaagatca
      841 acaatgaccg gagtagagat tacacgatgc ctgctgtgcc gatgatgaac ccacagcctt
      901 cgatcttggg gcaacaacca ccgtcagctg tccctcagta caacaccgcg cagtacatgc
      961 cgggtccaga aggatatgca gctcctcaat ccatgccaat gcagcagaca cagggctggg
     1021 ttccaggtcc accatcagga ccagcagggc ctcaatccat gccaatgcag caggctcata
     1081 atcaccctta catgccgcag cagggcatgc ctcctcaaat gggtccgggc cctaatcatt
     1141 acaatggtca gaatggctac ccacaaggtg gtgtcccacc tcgttaccat ctatagaatt
     1201 cttctctctt tggacttcct tgctctttct tgtgttttta tttcatattg tcgagattgg
     1261 tttgttatct agttgttaaa gcgggctgca aggggtaccg tttgagacca tattacagct
     1321 ttatgccttt atctccattt tgtcttctga acattttgct tggacttctg aattcattgg
     1381 agactggctt ggtgatctat tcattttagt atgtcatcaa aatgcaacat tttggtccac
     1441 caactccaaa cacacaaaaa tgtctgagct aaatcttttt ttgattcttt ttacaataaa
     1501 gcaatatatt gtaactaaaa tggtaattaa cagagacttt cttcattcgt tggcgg
//
LOCUS       XM_071830091            1553 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polypyrimidine tract-binding
            protein homolog 2-like (LOC139839889), transcript variant X3, mRNA.
ACCESSION   XM_071830091
VERSION     XM_071830091.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1553
                     /gene="LOC139839889"
                     /note="polypyrimidine tract-binding protein homolog
                     2-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139839889"
     CDS             150..1193
                     /gene="LOC139839889"
                     /codon_start=1
                     /product="polypyrimidine tract-binding protein homolog
                     2-like isoform X3"
                     /protein_id="XP_071686192.1"
                     /db_xref="GeneID:139839889"
                     /translation="MMPALSALMCCTWPISRIYLRWQLIAWRERAHVFSAFGFVHKIT
                     TFEKTAGFQALIQFTDSETATSAKDALDGRSIPRYLIPELGPCSLKITYSAHTDLSVK
                     FQSHRSRDYTNPMLPVASSAIDASGQFNLAIDGKKIESESNVLLASIENMQYAVTIDV
                     LQTVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDGGFCKLHIS
                     YSRHTDLSIKINNDRSRDYTMPAVPMMNPQPSILGQQPPSAVPQYNTAQYMPGPEGYA
                     APQSMPMQQTQGWVPGPPSGPAGPQSMPMQQAHNHPYMPQQGMPPQMGPGPNHYNGQN
                     GYPQGGVPPRYHL"
     misc_feature    <246..458
                     /gene="LOC139839889"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    573..863
                     /gene="LOC139839889"
                     /note="RNA recognition motif 3 (RRM3) found in plant
                     polypyrimidine tract-binding protein homolog 1 and 2
                     (PTBPH1 and PTBPH2); Region: RRM3_PTBPH1_PTBPH2; cd12690"
                     /db_xref="CDD:410091"
     misc_feature    order(585..587,591..593,672..674,678..680,684..686,
                     699..701,705..707,795..797,804..809,822..836)
                     /gene="LOC139839889"
                     /note="putative RNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:410091"
     misc_feature    <888..>1181
                     /gene="LOC139839889"
                     /note="Topoisomerase II-associated protein PAT1; Region:
                     PAT1; pfam09770"
                     /db_xref="CDD:401645"
ORIGIN      
        1 aatgatatca tattatgctt cgtcatcaga acccgctcag gtacgaggga aaaccgtcta
       61 cctacaatat tcaaacaggc atgaaatcgt gaacaacaaa acctctgctg atgttgctgg
      121 gaatgtactt ttggtaacca ttgagggcaa tgatgcccgc tctgtcagca ttgatgtgtt
      181 gcacctggcc catatcaagg atttatcttc gatggcagct tattgcttgg agagaaagag
      241 cgcatgtgtt ctctgcgttt gggtttgtgc ataaaattac aacttttgag aagacagctg
      301 gattccaggc tctaatccag tttacagatt cagaaactgc tacgtctgca aaagatgctc
      361 ttgacggaag gagtatacca aggtatttga ttccagagct agggccttgt tctctaaaga
      421 taacttattc tgcacataca gatttgagtg taaagtttca gagtcatcgt agcagggact
      481 ataccaaccc tatgcttccg gtcgcatcct ctgcaataga tgcaagtggt cagttcaatc
      541 tggctataga tgggaagaag attgaatctg agagtaatgt tcttcttgct tcaatcgaga
      601 acatgcagta tgcagtcaca attgatgtgt tacagacggt gttctcttct tttggacctg
      661 ttttgaagat tgccatgttt gacaaaaatg gaggagtcca agctttgatt cagtaccctg
      721 atgttcagac agctgtggct gccaaggaag ccttggaagg tcactgcata tacgatggag
      781 ggttttgcaa gcttcacatc tcgtattctc ggcacactga tttaagtatt aagatcaaca
      841 atgaccggag tagagattac acgatgcctg ctgtgccgat gatgaaccca cagccttcga
      901 tcttggggca acaaccaccg tcagctgtcc ctcagtacaa caccgcgcag tacatgccgg
      961 gtccagaagg atatgcagct cctcaatcca tgccaatgca gcagacacag ggctgggttc
     1021 caggtccacc atcaggacca gcagggcctc aatccatgcc aatgcagcag gctcataatc
     1081 acccttacat gccgcagcag ggcatgcctc ctcaaatggg tccgggccct aatcattaca
     1141 atggtcagaa tggctaccca caaggtggtg tcccacctcg ttaccatcta tagaattctt
     1201 ctctctttgg acttccttgc tctttcttgt gtttttattt catattgtcg agattggttt
     1261 gttatctagt tgttaaagcg ggctgcaagg ggtaccgttt gagaccatat tacagcttta
     1321 tgcctttatc tccattttgt cttctgaaca ttttgcttgg acttctgaat tcattggaga
     1381 ctggcttggt gatctattca ttttagtatg tcatcaaaat gcaacatttt ggtccaccaa
     1441 ctccaaacac acaaaaatgt ctgagctaaa tctttttttg attcttttta caataaagca
     1501 atatattgta actaaaatgg taattaacag agactttctt cattcgttgg cgg
//
LOCUS       XM_071830092            1505 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative RING-H2 finger
            protein ATL21A (LOC139839890), mRNA.
ACCESSION   XM_071830092
VERSION     XM_071830092.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1505
                     /gene="LOC139839890"
                     /note="putative RING-H2 finger protein ATL21A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139839890"
     CDS             52..1233
                     /gene="LOC139839890"
                     /codon_start=1
                     /product="putative RING-H2 finger protein ATL21A"
                     /protein_id="XP_071686193.1"
                     /db_xref="GeneID:139839890"
                     /translation="MVPKLIYPIFMFITFINNKTLPLFIFLFITKSASGNDDCTPTFC
                     SPTGPQIRFPFRLRDRQPARCGFPGFDLTCDSKNQTLIKLASARSYVVNQILYTSQMI
                     KIDPDFCSPGRLGDIKIIGTPFDFSLVDRYTFLNCSTQSLDSSFQTIPMIPFPCLGGV
                     NNSVYAVRTDWIPFGDIPSSCRDIMTVSVPVRRVGDISHELTLLWFRPFCRSCELDGK
                     TCGLKSDDGETVCLGGSSNGIPRGAKYGLSIGIGVPSLVCIFGLVCYIFGRVRNYNQG
                     QRHSIDLFSIAITPQQPTTTGLDAPTIASYPKTILGESCRLPKEDGTCAICLSDYEPK
                     EEVRTIPECNHYFHADCIDEWLKLNATCPVCRNSPETSSLVTPCFSESSNSSNLSDTT
                     T"
     misc_feature    181..363
                     /gene="LOC139839890"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; Region: GUB_WAK_bind; pfam13947"
                     /db_xref="CDD:464052"
     misc_feature    1021..1149
                     /gene="LOC139839890"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins; Region:
                     RING-H2_EL5-like; cd16461"
                     /db_xref="CDD:438124"
     misc_feature    1102..1119
                     /gene="LOC139839890"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
ORIGIN      
        1 actcatcaat catcaccatt caccactact agaaccttac tttaaccaac aatggtgccc
       61 aaactcatct atcctatttt tatgtttatt acttttatca ataacaaaac cctaccctta
      121 tttattttcc ttttcataac taaatctgcc tccggcaacg atgactgtac tccaactttc
      181 tgcagcccaa ccggacctca aatccggttt cccttccgcc tccgtgaccg gcaacctgct
      241 cgctgtggtt tccccggttt tgatctaact tgcgatagca aaaatcaaac acttataaag
      301 cttgcatcag ctagatcata cgtcgttaat caaattttat acacttcgca gatgatcaaa
      361 atcgatccgg acttctgttc accggggaga ctaggggata tcaaaataat cggcacaccg
      421 tttgatttca gtttagttga tcgatacaca tttttgaact gttcgacgca gagtctagat
      481 tcttcgtttc agacgatacc gatgattccg tttccctgtt taggaggtgt gaataattca
      541 gtttatgctg tgcggacgga ttggattccg tttggagata ttccgtcgag ttgtcgggat
      601 ataatgacgg tttcggtgcc tgttagacgg gtaggtgata tcagccatga attgacgttg
      661 ttgtggttta gaccgttttg cagatcttgt gaacttgatg gtaaaacttg tggattaaag
      721 agtgatgatg gagagaccgt ttgtttgggt ggttcttcta acggtattcc gaggggtgcc
      781 aagtatgggc taagcatagg tatcggcgta ccttcactag tatgcatctt tggtcttgta
      841 tgctacattt ttggccgggt aagaaactat aatcaaggtc aacgtcacag cattgacctt
      901 ttttctatcg caatcacccc acaacaacct acaacaaccg gcctagatgc acccacaatc
      961 gcttcttacc caaaaaccat actaggcgaa agttgtagat tacccaaaga ggatggcacg
     1021 tgtgccatat gcctttcgga ctatgagccc aaagaggaag taagaactat tccggagtgc
     1081 aatcactatt ttcatgcaga ttgtatagat gagtggctca agttaaatgc aacttgtccg
     1141 gtatgcagga attcacctga aacttcgtct ttggttacac cttgtttttc agagtcatca
     1201 aattcttcga atttatcgga cacaaccact taacagagag tttttgatgt gtcgtgtata
     1261 ttataattaa tacggagtac tgtataagca caagagattt catagtgtag ggtgtagatg
     1321 aattgcccct ctcgggattc aataggaagt cattacgttc caaagtttta agattatgta
     1381 tcgcttgtat aatactaata atttacacga gaacagcatc gagttcatgt ttgagcaaac
     1441 tcaaagttat tgatgtactt tgttataaga tctatctatt acatttatta ttcatggtac
     1501 atcca
//
LOCUS       XM_071830094            1427 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839891), mRNA.
ACCESSION   XM_071830094
VERSION     XM_071830094.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1427
                     /gene="LOC139839891"
                     /note="uncharacterized LOC139839891; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839891"
     CDS             162..1157
                     /gene="LOC139839891"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686195.1"
                     /db_xref="GeneID:139839891"
                     /translation="MDRYQKVEKPKAEQPIDENEIRITSQGRMRSYITYAMTLLQEKG
                     ASEIVFKAMGRAINKTVTIVELIKRRIVGLHQITSIGSTDITDTWEPLEEGLLPLETT
                     RHVSMITITLSKNELDTSSIGYQQPIPADQVKASTEFDYEGEGSPTTRGRGRGGRGRG
                     GRSRVPPGNGYGPTDEFDDGGWDSPGGYPPRGRGRGGRGRGFRGCGRGNYNNAPFVDT
                     QQQDVGGYNQESPRGRGRNFRGRGRGGYNNGPYVDNQQDAVGGYNQEPFNGRGRNFRG
                     GRGRGGYNNEPYMDAHQDGGGYNQEGRGRGRGRGVRGRGRGFRTNRPAQPADGGD"
     misc_feature    216..410
                     /gene="LOC139839891"
                     /note="Region: Alba; pfam01918"
                     /db_xref="CDD:426509"
ORIGIN      
        1 ggcacaaccg gtgatataaa tacagaaaat caccatagcc atacagtttc tagggcttaa
       61 acgaagaaat ttgaagccgg agttaaggct cttcgagcta tacgtacacg cttatatctg
      121 aatcatcgaa ctacacagac actcaatcaa tcaatcaaac gatggatcgg taccagaaag
      181 ttgagaaacc gaaagctgaa cagccaattg acgagaatga gattcgaatt actagccagg
      241 gaaggatgcg aagctatatt acatatgcca tgactttgct tcaggaaaaa ggcgcgtcag
      301 agattgtgtt taaagccatg ggtagagcca tcaacaagac tgtcacgatt gtagaattaa
      361 taaagaggcg aatagttggt cttcatcaaa taacatccat tggatctaca gacatcactg
      421 acacctggga accgttggaa gaaggattgt tacctctcga gaccacaaga catgtgtcaa
      481 tgataactat aactctctcc aagaatgagt tggatacgtc atctattggg tatcagcaac
      541 caataccagc tgaccaagtg aaggcgtcta ccgaatttga ttacgaagga gaaggatcac
      601 caactacaag gggaaggggt cgtggtggaa gaggaagagg gggacggtct agagtgccac
      661 cgggaaatgg ttatggacca acagatgagt ttgatgatgg gggttgggat agtcctggtg
      721 gttatcctcc gaggggcaga ggaagagggg gaagaggtag aggctttcgt ggttgtggaa
      781 ggggaaatta caataatgcc ccttttgtag atactcaaca gcaagatgta ggaggataca
      841 atcaagaatc tccaaggggc aggggtcgta atttccgtgg tcgtggaagg ggaggctaca
      901 acaacggtcc ttacgtggat aatcagcaag atgctgttgg gggatacaat caagaacctt
      961 tcaatggcag gggacgtaat tttcgtggtg gtcgtggaag gggtggttac aataacgagc
     1021 cttatatgga tgctcaccaa gatggagggg gttataatca agaaggcaga ggccgaggtc
     1081 gtggaagggg agttcgtgga aggggtcgtg gttttagaac aaacaggcca gcccagcctg
     1141 cagacggtgg tgattaaaac ccaggttaaa tgttattggt ttcataatgt tctcaatcaa
     1201 tgtttgggtg tctgtcttgc tccattccta tgttttgttc aagttttgat tttcagataa
     1261 ttgatctagg gacatcagtt tgtactaaaa gtgtagacca agttttagta gtgagcttga
     1321 gtttttcctg tcttaatgtt cgcttaattt tttcaaaaaa tttattgtaa tatttttttt
     1381 taatcataat gcctttttag tttgttggta agtaaaggtc tgttact
//
LOCUS       XM_071830095            2898 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839892), transcript variant X1, mRNA.
ACCESSION   XM_071830095
VERSION     XM_071830095.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2898
                     /gene="LOC139839892"
                     /note="uncharacterized LOC139839892; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839892"
     CDS             647..2794
                     /gene="LOC139839892"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686196.1"
                     /db_xref="GeneID:139839892"
                     /translation="MLWFLALFANCILTMTKLHCFCLLMSAGRNASYDFYMMVREKDL
                     CWEYAEKLDGNKVKCKFCLRILNGGISRLKHHLSRLPSKGVNPCTKVKDDVTDKVRAI
                     IASKDDCKEIPLSKKRKRDEPESPIIVPANRNLVTLETPTPITRIFPSITQNAPSNSS
                     DEENAERSIALFFFENKLDFSIARSSSYQLMIDSVSKCGNGFNGPTPETLKNNWLETI
                     KSEVSLQSKEIEKEWSTTGCTIIVETWTDNKAKALINFLISSPSSMYFHKSVDASSYF
                     KNTKYLADLFDSVIHDFGPENIVQIILDNTLNCTGIVNHISQTYGTIFVSPCASQCLN
                     AILKQFSKIDWVNRCISQAQIITKFIYNQSSLLDMMKKFTLGEDIIKTGVTKYVSHFL
                     SLQSILKQRPRLKHMFNSPEFTNNPTYSNKPQSVTCISIVDDNEFWRAVEECVAVSDP
                     FLKVMREVSGGKPAVGSIYELMTKAKECIRTYYIMDDIKCKIFFDIVDQNWQSHLHSP
                     LHSAAAFLNPSIQYNPEIKFLGSIKEDFFRVLEKLLPTPEVRRDITNQILLFTRASGM
                     FGCNLAKEAIDAVPPGIWWEQYGDSSPTLQRVAMRILSQVCSTSPFEKHWSTFQQIHS
                     EKRNKIDKETLNDIAYIHYNLKLAKSKNSKSDADPIQLGEIDMTSEWVEETDNCSPTQ
                     WLDRFGPALDGSDLNIRQFSNSMFGSNDHLFNL"
     misc_feature    1259..1714
                     /gene="LOC139839892"
                     /note="Protein of unknown function (DUF 659); Region:
                     DUF659; pfam04937"
                     /db_xref="CDD:461492"
     misc_feature    <2384..2581
                     /gene="LOC139839892"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
     polyA_site      2898
                     /gene="LOC139839892"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttttatcttt aaattataaa tatttataaa aatacaatta atcaatccct agcatcgaga
       61 gatgctgaat tatggtacac ctagaaccct aatttttcta tcaaatgaag atgataaact
      121 ctcgcgtgct ggaaataatg aatttatcga tgtttagttg taacaactat caaaattgaa
      181 tcagtttact gaatttgatt gctataaggt tacatttgta ttcgcattct agtaaattag
      241 gtttgcggag tatcaacatg ttcaattttt gcttttacgt tataattgat ctattgatgt
      301 atacctgctg cagttattag tttgttgaac ctgattttgg ccgattttga attagttatg
      361 aattttaaat agaactacgt cgtaatattt accgatttag aaagagatta taaatttata
      421 ggtagctgta tgcatacgat ctgcagaggc aaattttaga cattgtggtc tctatatcag
      481 caggcctaca aaggcattcg atattcgata tattgattat gttgtcatca atgacatatg
      541 caagtggcag tgtggaaatc gttgcattcc attatcatga acatttggat gataagcaac
      601 tttttttttt gtttactggt gccaagtttt tttcatcaat cgatatatgt tatggttctt
      661 ggctttgttt gctaattgta tactaactat gacaaaactt cattgttttt gcctgttaat
      721 gtcagcaggg cggaatgcta gttatgactt ctacatgatg gtgcgagaga aagatctttg
      781 ctgggagtat gctgagaaac ttgacggaaa caaggttaaa tgcaaattct gtcttagaat
      841 tttgaatgga ggcataagta gattgaaaca tcatctttct cgtcttccaa gtaaaggtgt
      901 aaatccttgt actaaagtta aagatgatgt gaccgataag gttagggcca taatagcatc
      961 aaaggatgac tgtaaagaaa tccctttatc aaagaagcga aaacgagatg aacctgaatc
     1021 acccattatt gtccctgcaa atagaaatct tgtaaccctt gaaacaccaa ctccaattac
     1081 gagaatcttt cctagtatta ctcaaaacgc cccttctaat tcaagtgatg aagaaaatgc
     1141 tgaaagaagt atagctcttt tctttttcga gaacaaattg gactttagta ttgcccgatc
     1201 gtcatcatat caactaatga ttgattcagt gtctaaatgt ggtaacggat ttaacgggcc
     1261 cacacctgaa actctaaaaa acaattggtt ggagactata aagtctgaag tcagcttaca
     1321 atctaaagaa attgaaaaag aatggtcaac aacgggttgc acaataatag ttgaaacatg
     1381 gaccgacaac aaagctaaag ctttgatcaa cttcctaata tcatccccat ctagcatgta
     1441 ttttcacaaa tcagtagatg catcttctta tttcaagaac accaagtatc ttgctgattt
     1501 atttgattct gtgattcatg attttggccc agaaaatatt gtgcagataa tcttggataa
     1561 cactctcaat tgcacgggta tagtaaatca catttcacaa acttatggaa ctatctttgt
     1621 atctccttgt gcttcacaat gtctaaatgc aatcttgaaa cagttttcaa agatagattg
     1681 ggtgaatcga tgcatatcgc aggcacaaat tattacaaag ttcatataca accagtcatc
     1741 acttcttgat atgatgaaaa agtttacttt aggcgaagat atcatcaaaa ccggtgtcac
     1801 aaaatacgtt tcccacttct tatccttgca atcgatatta aagcaaaggc caagattgaa
     1861 acacatgttt aacagccccg agtttacaaa taaccctact tattcaaata aaccgcagag
     1921 cgttacatgc attagtatag ttgatgataa cgagttttgg agggcggtgg aagagtgtgt
     1981 tgcggtttct gacccgtttt tgaaggtaat gagggaggtt tcgggtggta aaccagcagt
     2041 tggttcgatt tatgagttga tgacgaaagc taaggagtgt attaggacat attatattat
     2101 ggatgatatt aaatgtaaga ttttttttga tattgtggat caaaattggc agagtcatct
     2161 tcattcaccg ttacattcag cagctgcatt tttgaatcct agtattcagt ataatccgga
     2221 gatcaagttt cttggatcta ttaaagaaga cttttttagg gttttagaaa agctgttgcc
     2281 aactcctgaa gtaagacgag atattactaa tcaaattttg ttgtttacga gggcctctgg
     2341 gatgtttggc tgcaatctcg ctaaggaggc cattgatgct gttccgcctg gaatttggtg
     2401 ggaacaatac ggtgactctt ctccaacgtt acaacgagtt gccatgagaa tactgagtca
     2461 ggtttgtagt acttctccat ttgagaagca ttggagtacg tttcagcaaa ttcactctga
     2521 gaaacgaaat aagatcgata aagaaacttt gaacgatatt gcttacatac attataatct
     2581 aaagttagcg aaatccaaaa attcaaagtc agatgcagat ccaatacaac taggtgagat
     2641 tgatatgact tcagagtggg ttgaagagac agataattgt agcccaactc agtggcttga
     2701 tcgttttggt ccagctctcg atggtagcga cttgaatata agacagttca gtaattctat
     2761 gtttggttcc aacgaccatt tgtttaattt gtgatgtata tttatgttgt aattgtttgc
     2821 aaaactctgt ttgtgacagc cgtaggaaca tgtaaattgt agccaggaag gtttaattga
     2881 atggttgatt ttagtttt
//
LOCUS       XM_071830096            2267 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839892), transcript variant X2, mRNA.
ACCESSION   XM_071830096
VERSION     XM_071830096.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2267
                     /gene="LOC139839892"
                     /note="uncharacterized LOC139839892; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839892"
     CDS             124..2163
                     /gene="LOC139839892"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686197.1"
                     /db_xref="GeneID:139839892"
                     /translation="MMVREKDLCWEYAEKLDGNKVKCKFCLRILNGGISRLKHHLSRL
                     PSKGVNPCTKVKDDVTDKVRAIIASKDDCKEIPLSKKRKRDEPESPIIVPANRNLVTL
                     ETPTPITRIFPSITQNAPSNSSDEENAERSIALFFFENKLDFSIARSSSYQLMIDSVS
                     KCGNGFNGPTPETLKNNWLETIKSEVSLQSKEIEKEWSTTGCTIIVETWTDNKAKALI
                     NFLISSPSSMYFHKSVDASSYFKNTKYLADLFDSVIHDFGPENIVQIILDNTLNCTGI
                     VNHISQTYGTIFVSPCASQCLNAILKQFSKIDWVNRCISQAQIITKFIYNQSSLLDMM
                     KKFTLGEDIIKTGVTKYVSHFLSLQSILKQRPRLKHMFNSPEFTNNPTYSNKPQSVTC
                     ISIVDDNEFWRAVEECVAVSDPFLKVMREVSGGKPAVGSIYELMTKAKECIRTYYIMD
                     DIKCKIFFDIVDQNWQSHLHSPLHSAAAFLNPSIQYNPEIKFLGSIKEDFFRVLEKLL
                     PTPEVRRDITNQILLFTRASGMFGCNLAKEAIDAVPPGIWWEQYGDSSPTLQRVAMRI
                     LSQVCSTSPFEKHWSTFQQIHSEKRNKIDKETLNDIAYIHYNLKLAKSKNSKSDADPI
                     QLGEIDMTSEWVEETDNCSPTQWLDRFGPALDGSDLNIRQFSNSMFGSNDHLFNL"
     misc_feature    628..1083
                     /gene="LOC139839892"
                     /note="Protein of unknown function (DUF 659); Region:
                     DUF659; pfam04937"
                     /db_xref="CDD:461492"
     misc_feature    <1753..1950
                     /gene="LOC139839892"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
     polyA_site      2267
                     /gene="LOC139839892"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtatccata aaaaacgaga aaaagcccta attcttcttc agctcattcg ctttgaaaat
       61 ctcgcgagat aatctgcaac ttcattttga tttacctggc ggaatgctag ttatgacttc
      121 tacatgatgg tgcgagagaa agatctttgc tgggagtatg ctgagaaact tgacggaaac
      181 aaggttaaat gcaaattctg tcttagaatt ttgaatggag gcataagtag attgaaacat
      241 catctttctc gtcttccaag taaaggtgta aatccttgta ctaaagttaa agatgatgtg
      301 accgataagg ttagggccat aatagcatca aaggatgact gtaaagaaat ccctttatca
      361 aagaagcgaa aacgagatga acctgaatca cccattattg tccctgcaaa tagaaatctt
      421 gtaacccttg aaacaccaac tccaattacg agaatctttc ctagtattac tcaaaacgcc
      481 ccttctaatt caagtgatga agaaaatgct gaaagaagta tagctctttt ctttttcgag
      541 aacaaattgg actttagtat tgcccgatcg tcatcatatc aactaatgat tgattcagtg
      601 tctaaatgtg gtaacggatt taacgggccc acacctgaaa ctctaaaaaa caattggttg
      661 gagactataa agtctgaagt cagcttacaa tctaaagaaa ttgaaaaaga atggtcaaca
      721 acgggttgca caataatagt tgaaacatgg accgacaaca aagctaaagc tttgatcaac
      781 ttcctaatat catccccatc tagcatgtat tttcacaaat cagtagatgc atcttcttat
      841 ttcaagaaca ccaagtatct tgctgattta tttgattctg tgattcatga ttttggccca
      901 gaaaatattg tgcagataat cttggataac actctcaatt gcacgggtat agtaaatcac
      961 atttcacaaa cttatggaac tatctttgta tctccttgtg cttcacaatg tctaaatgca
     1021 atcttgaaac agttttcaaa gatagattgg gtgaatcgat gcatatcgca ggcacaaatt
     1081 attacaaagt tcatatacaa ccagtcatca cttcttgata tgatgaaaaa gtttacttta
     1141 ggcgaagata tcatcaaaac cggtgtcaca aaatacgttt cccacttctt atccttgcaa
     1201 tcgatattaa agcaaaggcc aagattgaaa cacatgttta acagccccga gtttacaaat
     1261 aaccctactt attcaaataa accgcagagc gttacatgca ttagtatagt tgatgataac
     1321 gagttttgga gggcggtgga agagtgtgtt gcggtttctg acccgttttt gaaggtaatg
     1381 agggaggttt cgggtggtaa accagcagtt ggttcgattt atgagttgat gacgaaagct
     1441 aaggagtgta ttaggacata ttatattatg gatgatatta aatgtaagat tttttttgat
     1501 attgtggatc aaaattggca gagtcatctt cattcaccgt tacattcagc agctgcattt
     1561 ttgaatccta gtattcagta taatccggag atcaagtttc ttggatctat taaagaagac
     1621 ttttttaggg ttttagaaaa gctgttgcca actcctgaag taagacgaga tattactaat
     1681 caaattttgt tgtttacgag ggcctctggg atgtttggct gcaatctcgc taaggaggcc
     1741 attgatgctg ttccgcctgg aatttggtgg gaacaatacg gtgactcttc tccaacgtta
     1801 caacgagttg ccatgagaat actgagtcag gtttgtagta cttctccatt tgagaagcat
     1861 tggagtacgt ttcagcaaat tcactctgag aaacgaaata agatcgataa agaaactttg
     1921 aacgatattg cttacataca ttataatcta aagttagcga aatccaaaaa ttcaaagtca
     1981 gatgcagatc caatacaact aggtgagatt gatatgactt cagagtgggt tgaagagaca
     2041 gataattgta gcccaactca gtggcttgat cgttttggtc cagctctcga tggtagcgac
     2101 ttgaatataa gacagttcag taattctatg tttggttcca acgaccattt gtttaatttg
     2161 tgatgtatat ttatgttgta attgtttgca aaactctgtt tgtgacagcc gtaggaacat
     2221 gtaaattgta gccaggaagg tttaattgaa tggttgattt tagtttt
//
LOCUS       XM_071830097            2049 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides plastidial pyruvate kinase 2
            (LOC139839893), mRNA.
ACCESSION   XM_071830097
VERSION     XM_071830097.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2049
                     /gene="LOC139839893"
                     /note="plastidial pyruvate kinase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139839893"
     CDS             78..1811
                     /gene="LOC139839893"
                     /codon_start=1
                     /product="plastidial pyruvate kinase 2"
                     /protein_id="XP_071686198.1"
                     /db_xref="GeneID:139839893"
                     /translation="MAQMFASKLTYNSFASSNNQHIEKMKPNLNNHNHAGFASQFVIG
                     ASNESISNKQRIVKITATKQEVQVVPVTPEDILPKIAEQNYQSPDALEQGDNVIGMWS
                     RPLVKRKTKIVCTIGPSTDTKEMIWKMAEAGMNVARLNMSHGDHASHQKVIDLVKEYN
                     AQSKDNVIAIMLDTKGPEVRSGDLPQPVNLESGQEFTFTIKRGVGTADCVSVNYDDFV
                     NDVEAGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITE
                     KDWDDIKFGVDNGVDFYAVSFVKDAEVIHELKNYLKSCGADIQVIPKIESADSIPNLQ
                     SIITASDGAMVARGDLGAELPIEEVPLLQEEIINTCRSMGKAVIVATNMLESMIVHPT
                     PTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEASIVGGATPSN
                     LGQAFKNHMSEMFAFHATSMSNTLGTSIVVFTRSGFMAVLLSHYRPTGTIFAFTNDKR
                     VQQKLALYQGVCPIYMEFTNDAEETFGNALSTLKNQGMVKEGEQVAIVQSGRQPIWRF
                     QSTHNIQVRKV"
     misc_feature    228..1808
                     /gene="LOC139839893"
                     /note="pyruvate kinase; Region: PLN02623"
                     /db_xref="CDD:215334"
     polyA_site      2049
                     /gene="LOC139839893"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgatacaatc gaagagagtc tcatccctgc tatctttctc ccttcctgat taaaaaaaaa
       61 ctgaattcaa tcaatcaatg gctcagatgt ttgcttccaa attaacctat aattcatttg
      121 cgtcctcaaa caatcaacac attgaaaaga tgaaacccaa tcttaataac cacaatcacg
      181 ctggttttgc ttctcaattt gtaattggtg ctagcaatga atcaattagt aacaaacagc
      241 gtattgttaa aatcactgct acaaaacaag aagttcaggt tgttccggtt acacccgaag
      301 acatattacc caagatagca gagcagaatt atcaatcacc agatgcttta gaacagggtg
      361 ataatgtgat aggcatgtgg tctagaccgt tggtgaaacg caaaacgaaa attgtttgca
      421 caattggtcc ttccactgac accaaagaaa tgatatggaa gatggctgaa gctgggatga
      481 atgtagcaag acttaatatg tctcatggag accatgcgtc ccatcaaaaa gttattgacc
      541 ttgttaagga atataacgca caatccaaag ataacgttat cgcaattatg cttgatacaa
      601 agggacctga agtcaggagt ggggacttgc cgcagccagt taacttagaa agtggccaag
      661 aatttacgtt caccataaaa aggggggttg ggacagcaga ctgtgttagt gtgaactatg
      721 atgattttgt gaatgatgtg gaagcgggcg acatgctttt ggtcgatggt ggtatgatgt
      781 cgttgttggt aaaatccaag actgaagatt cagtaaaatg tgaagttgtg gatggcggag
      841 agctcaaatc aagacgtcac ttgaacgttc gtggaaaaag tgcaacccta ccgtccatca
      901 ctgaaaagga ttgggatgac atcaagtttg gagtggacaa tggagttgat ttttatgccg
      961 tctctttcgt taaggacgca gaagtcatcc atgagttaaa gaattacctc aaaagctgtg
     1021 gtgcagatat ccaagtgatt ccaaaaattg aaagtgcaga ctcaataccg aacttgcaat
     1081 caattatcac tgcatcggat ggggcaatgg ttgcaagagg agatcttggt gcagagctgc
     1141 ctatcgagga ggttccatta ttgcaggaag agataatcaa cacatgccga agcatgggaa
     1201 aagctgtaat agtagcaaca aatatgctcg aaagcatgat cgtgcatcct acaccaaccc
     1261 gagcagaagt atctgacatt gctattgctg ttcgagaagg tgctgatgca gttatgcttt
     1321 ctggagaaac tgctcatgga aagtttccat taaaagctgt taaagtaatg catacagtgt
     1381 cattgcgtac tgaagcgagc atagttggtg gtgccacccc ctctaatctt ggtcaagcct
     1441 ttaagaacca tatgagcgaa atgtttgcat tccatgccac atcaatgtcc aacactcttg
     1501 gaacttcaat tgtagtcttc actagatctg gcttcatggc cgttttattg agtcattatc
     1561 gacccactgg caccatcttt gccttcacta atgacaaaag ggtacaacaa aagttagctt
     1621 tgtatcaggg agtatgcccc atttacatgg agtttactaa tgatgctgag gagacttttg
     1681 gaaatgcgct cagcacgtta aagaatcagg gaatggtaaa ggaaggtgag caggttgcta
     1741 ttgttcagag tggcaggcag cctatctggc gattccaatc aacacataat attcaggtca
     1801 gaaaggtgta accgcaataa ttgacgggtt aacaagaacg ttatgcggtc acggttatat
     1861 ctttggtcat tcgattagca tgagtgatta gttttagggg ctgacttgcg tgcttttctc
     1921 tagattattt cctgtattat gctaggaatt ttaacttaag ctgaaattat gttgattggt
     1981 tatgtagtca ttatgtatca gataatagat tctattgttt aactaccagg accaagtttt
     2041 tcagactta
//
LOCUS       XM_071830098            1446 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SGT1 homolog B-like
            (LOC139839894), mRNA.
ACCESSION   XM_071830098
VERSION     XM_071830098.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1446
                     /gene="LOC139839894"
                     /note="protein SGT1 homolog B-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139839894"
     CDS             105..1202
                     /gene="LOC139839894"
                     /codon_start=1
                     /product="protein SGT1 homolog B-like"
                     /protein_id="XP_071686199.1"
                     /db_xref="GeneID:139839894"
                     /translation="MASDLITKAKEAFIDDHFELAVDYYSQAIAINPNNADLFSDRAQ
                     ANIKLENFTEAVSDANKAIELDPSNSKAYLRKGTACFKLEEYHTAKAAFEAGASLVPE
                     DARFRDWIKKCDKCIAVENDELPTQSLNATPTEVVTKLDAAPKDAEQVNNVSREVATT
                     APAKPKYRDGFYQKPEEAVVTIFAKGIPANNVSVNFGEQILSVTIDVPGEEPYIFQPR
                     LFGKIIPAKCKYAVLSTKIEIHLSKAEPIHWTSLEYSNNTMVVRSSNVSSVSNNRPAY
                     PSSKPTKDWDKLEALVKKEEKDEKLDGDAALNKFFRDIYSDADEDTRRAMRKSFVESN
                     GTVLSTNWKEVGSKEVEATAPDGMELRKWEY"
     misc_feature    105..1199
                     /gene="LOC139839894"
                     /note="SGT1, suppressor of G2 allele of SKP1; Provisional;
                     Region: PLN03088"
                     /db_xref="CDD:215568"
     misc_feature    108..194
                     /gene="LOC139839894"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(111..113,120..125,132..137,141..143,213..215,
                     222..227,234..239,243..248,315..317,324..329,336..341,
                     348..350)
                     /gene="LOC139839894"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    207..299
                     /gene="LOC139839894"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    312..386
                     /gene="LOC139839894"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     polyA_site      1446
                     /gene="LOC139839894"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accagagtca atatattcaa tcatcgcatt attcattcat tcatccatcc atcgtcttct
       61 tcttcactaa atcataagca cttgttcttc atcaatacag gtcaatggca tctgatctca
      121 tcaccaaagc taaagaagct ttcattgacg atcactttga actcgccgtt gactactatt
      181 ctcaggccat agccattaac cctaacaacg ccgacctctt ttctgaccgt gctcaggcca
      241 acattaaact cgaaaacttc accgaagcgg tttctgatgc aaacaaagca attgagttgg
      301 acccttcaaa ttcaaaggca tatttgcgca aaggcactgc atgcttcaag cttgaagaat
      361 atcacactgc taaagcagcc tttgaagctg gtgcttcttt agttccagaa gatgcacgat
      421 tcagagactg gataaaaaag tgcgacaagt gcattgccgt ggaaaatgac gagttaccaa
      481 cacaatcact taatgcaact cctactgagg ttgtcactaa acttgatgca gctcctaaag
      541 atgctgaaca agtaaataat gtttctagag aggttgcaac cacagcgcca gctaaaccaa
      601 aatacaggga tggattctat cagaaaccag aggaggcagt tgtgaccata tttgcaaagg
      661 gcatacctgc taataatgta tcagttaact tcggagaaca aatattaagt gttaccattg
      721 acgtgcctgg agaagagccg tatattttcc aacctcgctt gttcggaaag ataatccctg
      781 caaagtgcaa atatgccgtt ctctcaacaa aaatagaaat ccatctttca aaagcggagc
      841 caatacactg gacatctctt gaatatagca ataatactat ggttgtgcga tccagcaatg
      901 tctcatcagt aagcaacaac agacctgcgt acccttcctc gaaaccgaca aaggactggg
      961 ataaacttga ggctctagtg aaaaaagagg aaaaagacga aaagctagat ggcgatgcag
     1021 ctttgaacaa gtttttccgt gacatatatt cagatgcaga tgaggataca agaagggcca
     1081 tgagaaaatc ttttgtggag tcgaatggaa cagtgttgtc gacaaactgg aaagaggtgg
     1141 gatccaagga agttgaggca acggctccag atggtatgga actcaggaaa tgggaatatt
     1201 aatgttttgt gtcataacct tgaccttatt tcttagtgtc ttcttttgtg gcggacctgt
     1261 tctatattgg ttttgttggg tgtctgtctt ttgaaattgt ctactgtttt gcatgaagcc
     1321 aaacttagat aattatgcat tttgttacta gtttttgatt tggtattatg ccaagatgct
     1381 tttagagttt ctggtatagt aatgtcaaaa caatgttttt cttttggtac aatattcttg
     1441 tcaata
//
LOCUS       XM_071830099            1257 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rRNA 2'-O-methyltransferase
            fibrillarin 1-like (LOC139839895), mRNA.
ACCESSION   XM_071830099
VERSION     XM_071830099.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1257
                     /gene="LOC139839895"
                     /note="rRNA 2'-O-methyltransferase fibrillarin 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 20 Proteins"
                     /db_xref="GeneID:139839895"
     CDS             118..1056
                     /gene="LOC139839895"
                     /codon_start=1
                     /product="rRNA 2'-O-methyltransferase fibrillarin 1-like"
                     /protein_id="XP_071686200.1"
                     /db_xref="GeneID:139839895"
                     /translation="MRAPIRAGRGGGGGFRGGRGDGGGRGGGFSGGRSGGRSGGRGAG
                     GRGGGRGRGGPGGRGGRGGRGGGMKGGNKVIVEPHRHDGVFIAKGKEDALCTKNMVPG
                     EAVYNEKRISTQNEDGTKTEYRVWNPFRSKLAAAVLGGVDNIWMKPGSKVLYLGAASG
                     TTVSHVSDLVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGM
                     VDVIFSDVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFASEVKKLQ
                     AEQFKPMEQVTLEPFERDHACVVGGYRMPKKQKPAS"
     misc_feature    331..1044
                     /gene="LOC139839895"
                     /note="fibrillarin; Provisional; Region: PTZ00146"
                     /db_xref="CDD:240291"
     polyA_site      1257
                     /gene="LOC139839895"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcaaaaccct aaaatctgaa gtttttatat aaaccccctt tctattaaca actacacata
       61 aaccctagca accacttaaa acacaacgct caatcggctc acttattttt accaaacatg
      121 agagctccta tcagagccgg tcgtggtggc ggcggtggtt ttagaggcgg ccgtggagat
      181 ggaggtggta gaggaggtgg atttagcggt ggaaggagtg gtggaaggag cggcggaagg
      241 ggcgccggtg gaagaggcgg tggtagagga cgtggtgggc ccggaggtcg aggagggcgt
      301 ggtggtcgag gtggtggaat gaaaggagga aataaggtga tagttgagcc acatagacat
      361 gatggtgtgt ttattgctaa agggaaagaa gatgcacttt gtactaagaa tatggttcct
      421 ggtgaagctg tttataatga aaaaagaatc tctactcaga atgaagatgg aacaaagaca
      481 gagtacagag tatggaatcc atttaggtct aagttggctg ctgctgttct tggtggtgtt
      541 gacaatatct ggatgaaacc tggctctaag gtgctctatc taggtgctgc atcgggtact
      601 actgtgtctc atgtgtctga tcttgttggc ccaactggag ttgtgtatgc tgtggagttt
      661 tctcacagaa gtggtagaga tttggttaac atggccaaaa agagaacgaa tgttattcct
      721 attattgaag atgctaggca tccagccaag taccgaatgc ttgttggcat ggttgatgtt
      781 atattttctg atgttgctca acctgatcag gctaggattt tagcactcaa tgcttcttat
      841 ttcttgaaat ctggaggcca ttttgttatc tccatcaagg caaactgtat tgactcaaca
      901 gttccagcag aggctgtatt tgcttcagaa gtgaagaagc ttcaagctga gcagtttaaa
      961 ccaatggagc aggtcaccct tgaacccttt gagcgagacc atgcttgtgt cgttggaggc
     1021 taccggatgc caaagaaaca gaaacccgca tcatagatga aatcaccgat tttgcttttg
     1081 cacttctgta gaattttctt aggttgagct tgttttgttt aagaatatta ttttgtgaca
     1141 gatggttact tttaaactct aaatccatag taagatagct atcaactttt gttagcagtg
     1201 ggcatgtgtg taacagtgat tgttgaagtg gcatctagac tttttagcca ttgtttt
//
LOCUS       XM_071830100            4300 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter C family
            member 8-like (LOC139839896), mRNA.
ACCESSION   XM_071830100
VERSION     XM_071830100.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4300
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4300
                     /gene="LOC139839896"
                     /note="ABC transporter C family member 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139839896"
     CDS             100..3987
                     /gene="LOC139839896"
                     /codon_start=1
                     /product="ABC transporter C family member 8-like"
                     /protein_id="XP_071686201.1"
                     /db_xref="GeneID:139839896"
                     /translation="MASLRSFHGENQNVSEPLLDDENTSQLQEPSFLSKLIFSWVNPL
                     LALGYKKPLVLEDIPSLASVDQAAIAHEEFTKAWGSLQTEKNSNKANMVPKALAKVYF
                     RQMILAGLCVLLRTIAVVASPLLLYAFVRYTNRESKDLRQGLLLVGCLIIVKLTESLA
                     HRQFFFIARRTGMRMRSALMVAVYEKQLKLSNLGKKRHSTGEVVNYIAVDAYRMGEFP
                     MWFHTGWSCFVQLFLAIGVLFSIVGLGVLPGLAPLILCGLLNVPFAKAIQKCQLEFMV
                     AQDTRLRSTSEILNNMKVIKLQSWEEKFKKVVDSCRDIEFSWLRKAQIKKVYGTVLYW
                     MSPTLVSSFILFGCVLLKSAPLDAATIFTILATLRTMSEPVKLLPDALSTLIQVKVSF
                     DRISSFLVDDELKDNRVKRDQEMVKSDDCIRIQDGNFAWDPESLTPTLQNINLKVKRG
                     QKGAVCGSVGAGKSSLLYALLGEISKTSGTVDVSGSIAYVSQTSWIQSGTIQDNILYG
                     KQMDRTKYEKAIKACALDKDIEAFNHGDLTEIGQRGLNMSGGQKQRIQLARAVYNDAD
                     IYLLDDPFSAVDAHTAASLFNDCVTTCLKEKTVILVTHQVEFLSSVDSILVMKDGQVT
                     QSGNYEDLLMAGTAFEQLVNAHKDVITGLEPSPHDDKNELDETGNIHESIQDTNKSYL
                     SREISEEKVPLKGFAGVQLTEEEEKEIGGVGWKTFLDYVNISKGSWFFCSCVLTHVGF
                     VALQAAASYWLAFGIRIPKITTIMLIVVYSLLSSTSIFFVFLRSFFATLLGLKASKSF
                     FHKFTDSIFNAPMVFFDSTPIGRILTRASSDLSVIDFDIPFSVAFVVGAGIEIVATIG
                     IMASVTWQVLIVAIFTTAASIYIQGYYQPTARELMRINGTTKAPVMNYASETSLGVAT
                     IRAFKMQDRFFKDYLKLVDSDASTFIFSNATLEWLILRTEAFSNLTLFTAGLLLVLIP
                     QGSKSSGLVGLSLSYALALSGTQVFFTRWYCSLANYIVSVERMKQYMQIPPEPPAIVE
                     NNRPPSSWPSKGKIEFEDLQLRYRLNAPLVLKGITCTFKEGTRIGIVGRTGSGKTTLI
                     TALFRLVEPDSGKILIDGLDICSIGLKDLRMKLNVIPQEPTLFRGSIRTNMDPLGLHS
                     DDEIWEALEKCQLKSSIRSLPNLLDSSVSDEGENWSAGQRQLFCLGRVLLRRNKILVL
                     DEATASVDSATDAILQRIIREEFSNCTVITVAHRVPTVIDSDKVMVLSFGKMVEYDGP
                     SKLMETDSFFSKLVAEYWSSCKRNSSQSFDEHQ"
     misc_feature    145..3945
                     /gene="LOC139839896"
                     /note="ABC transporter C family member; Provisional;
                     Region: PLN03130"
                     /db_xref="CDD:215595"
ORIGIN      
        1 aaaaagtatt gcatagtagc tgctacataa gtccaactgc aataccttaa tggtttttta
       61 ctagtcaaat tgagaatttt tttaaccaga gaaattttta tggcttctct gaggagtttt
      121 catggtgaaa accagaatgt atctgagcct ttactggatg acgaaaatac gagccaatta
      181 caagagccta gttttctcag caaattgata ttttcatggg ttaacccatt gcttgcttta
      241 ggttacaaaa aacctttagt tctggaagat attccttctt tagcctcggt agatcaagca
      301 gccattgccc atgaggagtt caccaaagca tggggttcgc ttcaaacgga gaaaaattca
      361 aacaaggcta acatggttcc taaagcattg gccaaagttt attttcgaca gatgattttg
      421 gcgggacttt gtgttcttct cagaacaatt gctgttgtgg ctagcccatt gttactctat
      481 gcgtttgtaa gatatacaaa ccgtgaatct aaagatttac gtcaaggact tttgttagta
      541 ggatgtttga ttatagtcaa gttaacggag tcattggctc acagacagtt tttctttatt
      601 gcaagaagaa ctggtatgag gatgaggtcg gctttaatgg tggcagtgta cgaaaagcaa
      661 ctaaagcttt ctaatttagg aaagaaaagg cattcgacgg gggaagttgt gaattacata
      721 gcggttgatg cttacagaat gggtgaattt cctatgtggt ttcatacggg ttggtcttgt
      781 ttcgttcaac tatttctagc tatcggtgtc ttgttttcaa tagtaggact aggtgttctt
      841 ccgggtttag ccccgctaat cttatgcggg cttctaaacg tgccatttgc aaaagctatt
      901 caaaagtgtc agttggagtt tatggtggct caagatacaa gactaagatc cacttctgag
      961 atcctaaaca atatgaaggt cataaagttg caatcttggg aggaaaaatt caagaaagta
     1021 gttgattcgt gtagggatat tgaattcagt tggttgcgta aggctcagat aaagaaggtt
     1081 tatggtacgg ttttgtattg gatgtcacca acgctcgttt cttcattcat tctatttgga
     1141 tgtgtgctat taaaaagcgc cccattagat gctgcgacaa tctttacgat tttagcaaca
     1201 ttaagaacta tgtctgaacc cgtaaagttg ttgcctgatg cactttctac gttaatccag
     1261 gtcaaagtat cctttgatag gatcagttca tttttagttg atgatgaatt gaaagataac
     1321 agagtgaaaa gggaccaaga aatggtgaaa tcggatgatt gtatccgaat acaggatgga
     1381 aatttcgctt gggatcctga atcactcacc ccaacacttc agaatataaa tcttaaagtt
     1441 aaacgcgggc aaaaaggtgc agtttgcggg tcagttggtg ctggaaagtc atctttgtta
     1501 tatgcactcc ttggagaaat atccaaaact tcaggaacgg tggatgtttc tggatcaatt
     1561 gcttatgtta gccaaacttc ttggatccaa agtgggacaa ttcaggataa catattgtat
     1621 gggaaacaaa tggatagaac gaaatacgaa aaggctataa aggcgtgtgc tttagataag
     1681 gacatagaag cttttaacca tggggatcta accgaaatag gccaaagagg acttaacatg
     1741 agtggcggac agaaacagag gattcaactc gctcgagcag tctataacga tgctgacatt
     1801 tatcttcttg atgatccttt tagtgcagta gacgcacata ccgcagcaag tctctttaat
     1861 gattgtgtta cgacttgtct caaggagaaa acggtcattc ttgtgactca tcaagtggag
     1921 tttctctcat cagttgacag tattttggta atgaaagatg gtcaagttac tcaatcagga
     1981 aactatgaag atctgttgat ggcagggaca gcttttgaac aacttgtgaa tgctcataaa
     2041 gatgtcatta caggtttaga accatcacct catgatgata aaaatgaact tgatgaaaca
     2101 ggaaatatac atgaaagcat acaagacacg aataaaagtt acctcagtag agaaattagt
     2161 gaagagaagg tgccgttgaa gggttttgca ggtgtgcagt tgaccgaaga agaagagaaa
     2221 gagattgggg gtgttggatg gaagacgttt ttggattacg tcaatatctc aaaaggatcg
     2281 tggttcttct gttcttgtgt cctaactcat gttggctttg ttgctcttca ggcagcagca
     2341 agttattggt tagcatttgg cattcgaatt cctaaaatca ccaccatcat gttgattgtt
     2401 gtttacagtt tgctctcatc cacaagtata ttttttgtgt ttctgagatc attttttgct
     2461 acccttttgg gattaaaagc ctccaaatca ttcttccata agttcaccga ctcaattttc
     2521 aacgctccta tggtcttctt tgactcaact ccaattggac gaattctaac aagggcctca
     2581 tctgatctta gtgtgattga ctttgacata ccgttttcgg ttgcctttgt ggtgggtgct
     2641 ggaattgaaa tagtggctac tattggcatt atggcttcag taacctggca agttctcatt
     2701 gtagccatct tcactaccgc cgcttcaata tacattcagg gatactatca gccaactgca
     2761 agggaactaa tgagaatcaa cggaactaca aaggcgcctg ttatgaacta cgcatcagaa
     2821 acatcactcg gagtggcaac aatacgagca ttcaagatgc aagacaggtt cttcaaagac
     2881 tacctcaagt tagtggattc agatgcaagt actttcattt tctcaaacgc aaccttggag
     2941 tggttgattt tgagaacaga agctttttca aacctgaccc tttttacagc tgggttgctc
     3001 ctggttctca taccacaagg ttccaagtct tcagggttgg ttggcctatc tctttcttat
     3061 gcactggcat tatcgggtac ccaagtattt tttactagat ggtattgtag cctagccaat
     3121 tacatcgttt cagtcgaacg aatgaaacaa tacatgcaaa ttccacctga gccaccagcg
     3181 attgtggaga acaatagacc accatcgtca tggccttcta agggaaaaat agagtttgaa
     3241 gatctacagt tgaggtatcg tttgaatgca ccactagttc tcaaaggaat cacatgtaca
     3301 ttcaaagaag ggactagaat aggcatagtt gggaggacag gaagcgggaa gacgacacta
     3361 ataacagccc tgtttcgttt ggtagaacct gatagcggga aaattcttat agacggatta
     3421 gacatttgct ctatcggcct taaagatctc aggatgaaac tgaatgtcat cccccaagaa
     3481 ccgacccttt ttagaggtag tattagaaca aatatggacc ctcttggact acattctgat
     3541 gatgagatat gggaggcatt agagaagtgt caacttaaaa gtagcatcag aagtcttcca
     3601 aatttgctag attcttctgt aagtgacgaa ggagagaact ggagtgcagg ccaaagacag
     3661 ctattctgtc ttggaagagt attactcagg agaaacaaga ttctagtact cgatgaagcc
     3721 actgcatcgg tcgattcagc cacagatgcc attttacaaa gaatcataag agaagaattc
     3781 tcaaattgca ccgtcataac cgttgctcac agagttccaa cagttattga cagtgacaag
     3841 gtcatggttc tctctttcgg aaaaatggtg gagtatgatg gaccttcaaa gctaatggag
     3901 actgattctt ttttctccaa gcttgtagcg gaatattggt ccagttgcaa aaggaactct
     3961 agtcagagct ttgacgaaca tcagtgacag caaaaataca aataatcaaa gaggcgcagt
     4021 ggaaatttga gctcgactca ataaataaca tccagcccag ttcaaataat ttcctcataa
     4081 cagtattatt gttgtgacaa tagtgtactt ttagcttata tgttctttcg gagtaatgat
     4141 atatagatta gcaaaatgaa catacaaatt tgtttgaatc gtgtggaggt taggtcatta
     4201 tataggccta ttaattattt ttgttttcta gatatatgat atagtagtat agtatgaatt
     4261 tggtatcatc aatttatcat cctgttgacc tttttcatat
//
LOCUS       XM_071830101            1854 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides elongator complex protein 3
            (LOC139839897), mRNA.
ACCESSION   XM_071830101
VERSION     XM_071830101.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1854
                     /gene="LOC139839897"
                     /note="elongator complex protein 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839897"
     CDS             79..1782
                     /gene="LOC139839897"
                     /codon_start=1
                     /product="elongator complex protein 3"
                     /protein_id="XP_071686202.1"
                     /db_xref="GeneID:139839897"
                     /translation="MTTTTTATVTTDTRKLPRPGRGGVISLGLTEEESRVRAIAEIVN
                     NMVELSHNGENVDLNALKSAACRKYGLSRAPKLVEMIAALPDAEREVLLPKLRAKPVR
                     TASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRA
                     RYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPAEYRDYFIRNLHDALSGHTS
                     ANVEEAVAYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVAR
                     DTNRGHTVAAVADCFALAKDAGFKVVAHMMPDLPNVGVERDMESFKEFFESPRFRADG
                     LKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMP
                     LVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIRPDEVQLVRRDYTAN
                     EGWETFLSYEDTRQDILVGLLRLRRCGKNVTCPELVGKCSIVRELHVYGTAVPVHGRD
                     ADKLQHQGYGTLLMEEAERIARREHRSTKIAVISGVGTRHYYRKLGYELEGPYMMKYL
                     V"
     misc_feature    247..1776
                     /gene="LOC139839897"
                     /note="radical SAM enzyme/protein acetyltransferase, ELP3
                     family; Region: ELP3; TIGR01211"
                     /db_xref="CDD:273503"
ORIGIN      
        1 acgttttgaa gtcgccaaat tagtcaaaac cctcgaaacc ttccatcccc gccttcgcaa
       61 ctcttccgtc actcaaccat gacgacaaca acgacggcga cggtcacaac cgacaccaga
      121 aagcttccac gtccaggccg tggcggcgtc atctcactag gactaaccga agaagaatca
      181 cgagttcgag ccatagctga aatcgtcaat aacatggtag aactctcaca taacggcgaa
      241 aatgttgacc taaatgccct aaaatcagcc gcgtgccgta aatacggtct atcacgtgct
      301 ccgaagctcg ttgaaatgat cgctgcgtta cctgatgctg aacgtgaggt tttattgcct
      361 aaacttcgag cgaaaccggt ccgaaccgca tctggaattg cagttgttgc ggttatgtcg
      421 aaaccgcatc ggtgtccgca tattgctaca acggggaata tatgtgtgta ttgtcctggt
      481 ggacctgatt cggattttga gtatagtaca cagtcttata ctggatatga gcctacaagt
      541 atgcgagcta ttcgtgctag atataaccca tatgtccaag ccaggagcag gattgatcag
      601 cttaagcgat tgggtcatag tgtagataag gttgaattca tcttgatggg tggcactttc
      661 atgtcattac cagctgaata ccgggactac tttattagga atcttcatga tgctttatcg
      721 gggcacactt ctgcaaatgt tgaagaggca gttgcttatt ctgagcatgg tgctactaaa
      781 tgtattggga tgactattga gacgagacca gactactgtc ttgggcctca tttgcgacaa
      841 atgctttctt atggttgtac gcgattagaa attggggtcc agagcacata cgaggatgtt
      901 gctcgtgata ccaatagagg ccacacggta gcagctgttg ccgattgctt tgctttggca
      961 aaagatgctg gttttaaggt ggttgctcat atgatgcctg atcttccaaa tgttggcgtt
     1021 gagagggata tggaaagttt caaggagttc tttgagagtc ctcgctttag agctgatggg
     1081 ctcaaaatat atccaacact tgttattcgt ggaacaggtc tttatgagct ctggaaaact
     1141 ggcaggtata gaaactaccc tccagagcag cttgtagaca ttgtggctcg aatcttggcc
     1201 ctggtacctc catggacacg tgtatacagg gttcagagag atattcctat gcctctcgtc
     1261 acctctggtg ttgaaaaagg gaatcttcga gagcttgctt tagctcgtat ggacgatttg
     1321 ggcttaaaat gcagagatgt tcgtacacgt gaagctggga ttcaagatat tcaccataaa
     1381 attagaccag atgaagttca gcttgttagg cgagattata ctgccaatga gggatgggaa
     1441 actttccttt cgtatgaaga cacacgacag gatattcttg ttggattact tcgtctgaga
     1501 agatgcggta agaacgtaac atgcccagaa cttgttggga aatgctccat tgttcgtgaa
     1561 ctccatgttt atggaactgc tgttccagta catggccgtg atgctgataa actacaacac
     1621 caggggtatg gcacactgct tatggaggaa gcagagcgaa ttgctcgtag ggagcatagg
     1681 tcaacaaaga tagctgttat ttcaggtgta ggaacacgac attactatag gaaattgggt
     1741 tacgagctcg aaggtcctta catgatgaag tatcttgtat aactagtggt ttgcacagaa
     1801 cacagttttg tatgctagta actgtgtgtg aaattattta attataatcc ttta
//
LOCUS       XM_071830102            1288 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides syntaxin-81-like
            (LOC139839898), transcript variant X1, mRNA.
ACCESSION   XM_071830102
VERSION     XM_071830102.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1288
                     /gene="LOC139839898"
                     /note="syntaxin-81-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839898"
     CDS             208..1164
                     /gene="LOC139839898"
                     /codon_start=1
                     /product="syntaxin-81-like"
                     /protein_id="XP_071686203.1"
                     /db_xref="GeneID:139839898"
                     /translation="MAKIRDRTEDFKDAVNRGALSLGFNEAKRAALMASFIIHKPRER
                     SQYTKAALKTLESIGTLEQFLIKHRKDYIDRHRTTEEERDNIEHEVSIFVKACKEQID
                     FLQSSITDEEVNSKGWLGIRGDNANADTIAHKHGVVLILSEKLHSVTSQFDQLRALRF
                     QEAITRAMPRRKPISARAKTYTDVSRSSNNFESIEPTSSDIRDPSDIQTEPMKVQQQL
                     LDDETRALQVELSNLLDAARDTETKMVEMSALNHLMSTHVLQQAQQIEYLYDQAVEAT
                     KNVELGNKELTQAIQRNSSSRTFLLLFLIVLTFSVLFLDWYS"
     misc_feature    220..465
                     /gene="LOC139839898"
                     /note="SNARE-complex protein Syntaxin-18 N-terminus;
                     Region: Syntaxin-18_N; pfam10496"
                     /db_xref="CDD:463116"
     misc_feature    895..1071
                     /gene="LOC139839898"
                     /note="SNARE motif; Region: SNARE; cl22856"
                     /db_xref="CDD:473982"
     misc_feature    order(979..981,1000..1002,1009..1011)
                     /gene="LOC139839898"
                     /note="flanking leucine-zipper layers; other site"
                     /db_xref="CDD:277192"
     misc_feature    988..990
                     /gene="LOC139839898"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
ORIGIN      
        1 aaaaaaaaaa tcagtttaaa atcccaaata caaacaccac tgtagcgatt gcaatctcgg
       61 tttgttagtg cttgtttgga tcgtacgtat gtatactctc gctcagtcat agcaattaca
      121 atctgctcaa ccgatctttc attttatatg tgcgattctc taaacccaaa agctatacac
      181 aagtggttta ttggtggatg ttaacgcatg gctaagatta gagatcggac tgaagacttt
      241 aaagatgctg tcaacagggg tgctttgtct ttgggattta atgaggccaa aagagcagca
      301 ttaatggcat cttttattat acacaaacct agggaaagat cacagtatac caaggctgca
      361 ctaaagacgc tagagagcat cgggactcta gaacagttct tgataaagca taggaaggat
      421 tatatagacc gtcaccgtac aacagaagag gagagggaca acattgagca tgaagttagt
      481 atttttgtta aagcttgtaa agaacaaatt gactttctcc aaagtagcat aacggatgaa
      541 gaagtgaatt cgaagggctg gcttggtatt aggggtgaca atgctaatgc tgataccatc
      601 gcacataaac atggagtggt attaatctta agtgaaaagc ttcattcagt tacatcacaa
      661 tttgatcaac tcagagcttt acgctttcaa gaggccatta ctcgagctat gcctagaaga
      721 aaaccaatct cggctcgtgc taaaacctat actgatgtct ctcggtctag caacaatttt
      781 gagtcaatcg aaccaacaag ttcagatatt agggacccta gtgatatcca aactgaaccc
      841 atgaaagtcc aacagcagct tttagatgat gaaacccgtg ctcttcaggt ggagttgtca
      901 aatcttctcg atgccgcgcg tgataccgaa acaaagatgg tagagatgtc agcattgaat
      961 catcttatgt caacgcatgt cttgcaacag gctcaacaaa tagagtattt gtatgaccag
     1021 gcggtagaag caacaaagaa tgtagagttg ggtaacaagg aattgacaca agcaattcag
     1081 cgtaatagca gtagcagaac attccttttg cttttcctta ttgtccttac cttttctgta
     1141 ctgtttcttg actggtacag ttaaaaattc agaccaatcg atcaacctat ttttatgttt
     1201 gttttgtttc tccaatcccg tttcagaaaa tctgtcaagg ataatagtag tagttatctt
     1261 gatatcaatt atatttattt ttgttgtt
//
LOCUS       XM_071830103            1303 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides syntaxin-81-like
            (LOC139839898), transcript variant X2, mRNA.
ACCESSION   XM_071830103
VERSION     XM_071830103.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1303
                     /gene="LOC139839898"
                     /note="syntaxin-81-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839898"
     CDS             223..1179
                     /gene="LOC139839898"
                     /codon_start=1
                     /product="syntaxin-81-like"
                     /protein_id="XP_071686204.1"
                     /db_xref="GeneID:139839898"
                     /translation="MAKIRDRTEDFKDAVNRGALSLGFNEAKRAALMASFIIHKPRER
                     SQYTKAALKTLESIGTLEQFLIKHRKDYIDRHRTTEEERDNIEHEVSIFVKACKEQID
                     FLQSSITDEEVNSKGWLGIRGDNANADTIAHKHGVVLILSEKLHSVTSQFDQLRALRF
                     QEAITRAMPRRKPISARAKTYTDVSRSSNNFESIEPTSSDIRDPSDIQTEPMKVQQQL
                     LDDETRALQVELSNLLDAARDTETKMVEMSALNHLMSTHVLQQAQQIEYLYDQAVEAT
                     KNVELGNKELTQAIQRNSSSRTFLLLFLIVLTFSVLFLDWYS"
     misc_feature    235..480
                     /gene="LOC139839898"
                     /note="SNARE-complex protein Syntaxin-18 N-terminus;
                     Region: Syntaxin-18_N; pfam10496"
                     /db_xref="CDD:463116"
     misc_feature    910..1086
                     /gene="LOC139839898"
                     /note="SNARE motif; Region: SNARE; cl22856"
                     /db_xref="CDD:473982"
     misc_feature    order(994..996,1015..1017,1024..1026)
                     /gene="LOC139839898"
                     /note="flanking leucine-zipper layers; other site"
                     /db_xref="CDD:277192"
     misc_feature    1003..1005
                     /gene="LOC139839898"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
ORIGIN      
        1 aaaaaaaaaa tcagtttaaa atcccaaata caaacaccac tgtagcgatt gcaatctcgg
       61 tttgttagtg cttgtttgga tcgtacgtat gtatactctc gctcagtcat agcaattaca
      121 atctgctcaa ccgatctttc attttatatg tgcgattctc taaacccaaa agctatacac
      181 aaaaattatt aatgaaggtg gtttattggt ggatgttaac gcatggctaa gattagagat
      241 cggactgaag actttaaaga tgctgtcaac aggggtgctt tgtctttggg atttaatgag
      301 gccaaaagag cagcattaat ggcatctttt attatacaca aacctaggga aagatcacag
      361 tataccaagg ctgcactaaa gacgctagag agcatcggga ctctagaaca gttcttgata
      421 aagcatagga aggattatat agaccgtcac cgtacaacag aagaggagag ggacaacatt
      481 gagcatgaag ttagtatttt tgttaaagct tgtaaagaac aaattgactt tctccaaagt
      541 agcataacgg atgaagaagt gaattcgaag ggctggcttg gtattagggg tgacaatgct
      601 aatgctgata ccatcgcaca taaacatgga gtggtattaa tcttaagtga aaagcttcat
      661 tcagttacat cacaatttga tcaactcaga gctttacgct ttcaagaggc cattactcga
      721 gctatgccta gaagaaaacc aatctcggct cgtgctaaaa cctatactga tgtctctcgg
      781 tctagcaaca attttgagtc aatcgaacca acaagttcag atattaggga ccctagtgat
      841 atccaaactg aacccatgaa agtccaacag cagcttttag atgatgaaac ccgtgctctt
      901 caggtggagt tgtcaaatct tctcgatgcc gcgcgtgata ccgaaacaaa gatggtagag
      961 atgtcagcat tgaatcatct tatgtcaacg catgtcttgc aacaggctca acaaatagag
     1021 tatttgtatg accaggcggt agaagcaaca aagaatgtag agttgggtaa caaggaattg
     1081 acacaagcaa ttcagcgtaa tagcagtagc agaacattcc ttttgctttt ccttattgtc
     1141 cttacctttt ctgtactgtt tcttgactgg tacagttaaa aattcagacc aatcgatcaa
     1201 cctattttta tgtttgtttt gtttctccaa tcccgtttca gaaaatctgt caaggataat
     1261 agtagtagtt atcttgatat caattatatt tatttttgtt gtt
//
LOCUS       XM_071830104            1993 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SWI/SNF complex component
            SNF12 homolog (LOC139839899), mRNA.
ACCESSION   XM_071830104
VERSION     XM_071830104.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1993
                     /gene="LOC139839899"
                     /note="SWI/SNF complex component SNF12 homolog; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139839899"
     CDS             188..1825
                     /gene="LOC139839899"
                     /codon_start=1
                     /product="SWI/SNF complex component SNF12 homolog"
                     /protein_id="XP_071686205.1"
                     /db_xref="GeneID:139839899"
                     /translation="MAGGSNNMNNSIKNIGSVSGPTGFGNSGATIPPTQSMGPPLNNS
                     NNQLSEPQAQALAHAQYVQAQAQAQARAAHARFQAQLQAQAQATQAQSVTQKQSLLGG
                     VNNNSNSNVGASSPSLSTPMNAKRSGQKPSSRVPSSSGGAAGSPLKTMELTPAARRRK
                     RGPPENQIPEKVAAILSESALYTQLLEFEGRVDAALARKKVDIQDSVKNPPRLPKMLR
                     IYVFNTFVNQTQTGSLKENAELPSWSLKILGRLLENGSDQQKSGSMNPKFSSFFKKTT
                     IYLDQNQYPDNHVILWESSRSLALNEGFEVKRKGDTEFTAIIRLEMNYTPEKFKLSPA
                     LSEILGLEVETRPRIIAAIWQYVKNKNLQISTDTSFFTCDPPLRKLFGEEKVKFSMVS
                     QKISHHLSPPQPIHLEHKIKLSGDNPSGNTCYDVLVDVPFSLDKDMSNFLENMEKQRE
                     VDACDVAICSAIKKIHEHRRRRAFFLGFSQSPSEFVDAFIASQSKDLKTAAGDATRDA
                     EKERRSEFYNQPWVEDAVIRYLNRKPAAGSEAPPGSI"
     misc_feature    1178..1384
                     /gene="LOC139839899"
                     /note="SWIB domain found in the 60 kda subunit of the
                     ATP-dependent SWI/SNF chromatin-remodeling complexes and
                     similar proteins; Region: SWIB_like; cd10568"
                     /db_xref="CDD:349490"
     misc_feature    order(1226..1228,1235..1240,1244..1249,1256..1261,
                     1274..1276,1289..1294,1298..1300,1349..1351,1358..1363)
                     /gene="LOC139839899"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:349490"
ORIGIN      
        1 acgaagccgc aaaactattg agaagagaaa aaatcatcac aaagattcat ctcacaagat
       61 cggaatttaa tttaaattta aatttaaatt cctttaaaaa gaaaccccaa atttcaacaa
      121 gcattacatg cgtggtttcg attgaaagta ttgattagga ttcttttgac aagaatttga
      181 gaatataatg gcaggcggta gtaataatat gaataattct ataaaaaata ttggcagtgt
      241 aagtggacca actggttttg gtaattcagg tgcaacaata ccacctactc aatctatggg
      301 accaccattg aacaactcga acaaccagtt gtctgagccg caggctcagg cattagctca
      361 cgctcagtat gttcaagctc aggctcaagc acaggctcga gctgctcatg cccggtttca
      421 ggctcagtta caagctcaag ctcaagcaac acaagcacaa tcggttactc agaagcaaag
      481 tttattagga ggggttaata ataatagtaa tagtaacgtt ggagcttcat caccatcact
      541 tagtactcct atgaatgcga aaagatcggg tcaaaaaccg tcttctcggg ttccgagttc
      601 ttcgggtggt gctgctggtt cgcctttaaa aaccatggag cttacacctg cggcccgtag
      661 acgaaaacgg ggcccacccg agaaccaaat tcctgaaaaa gtagccgcca ttttgtcaga
      721 atcagctctt tatactcaat tgctggaatt tgagggtcgt gtagatgcgg ctttagcgag
      781 aaaaaaagtt gatattcaag attctgttaa gaatcctcct cggttgccaa aaatgctcag
      841 gatttacgtt ttcaacacgt tcgtaaacca aacccaaacc ggatctctaa aggaaaatgc
      901 tgagttacct tcttggtctc tcaagattct tggtaggcta ttagaaaatg ggtcggatca
      961 acaaaaatcg ggctctatga acccaaagtt ttcatctttt ttcaagaaaa ccactattta
     1021 cttggaccaa aatcagtacc cagataacca tgtgatcttg tgggaaagtt ctagatcttt
     1081 ggcacttaac gagggttttg aagtgaagag aaaaggggat acagagttta ctgctataat
     1141 ccgattagaa atgaattaca cacctgaaaa attcaaactt tcacccgctt taagtgaaat
     1201 tcttggacta gaggtcgaga cccgcccaag aattatcgct gcaatatggc aatatgtgaa
     1261 aaataaaaac ttacaaatct cgaccgatac ttcattcttc acatgtgatc ctcctcttag
     1321 gaaactattc ggtgaagaaa aggtgaaatt ttcaatggtt tctcaaaaga tttcacatca
     1381 tttgagccca cctcagccta tacatttgga gcataagatc aagctttcgg gagataatcc
     1441 atccggaaat acatgttacg atgttcttgt tgatgttcct ttttcattag ataaagacat
     1501 gtctaatttt ttggaaaata tggagaaaca aagggaggtt gatgcttgtg atgtagcgat
     1561 ttgctctgca attaaaaaga tccatgaaca tagaagaaga cgagctttct ttttagggtt
     1621 tagtcagtca ccgagtgaat ttgttgatgc gtttattgca tcacagagta aggatttgaa
     1681 aacggctgct ggtgatgcta ctcgtgatgc tgagaaagag cgaaggtccg agttctataa
     1741 tcaaccatgg gtcgaagatg ctgttattcg ttacttgaac agaaaaccgg ctgcaggaag
     1801 tgaagcacca cctggaagca tatagtttaa gatagttgat aaatagtttc atatgtgggc
     1861 catggggata atttctgatc taacaactta agttatccta cttggtgcag tattagattt
     1921 tagttttgtt tgtttctttg ataatttctt gtaatatttg tttgactttg taggagtttc
     1981 ttgttatgat aat
//
LOCUS       XM_071830105            3386 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitogen-activated protein
            kinase kinase kinase YODA-like (LOC139839900), mRNA.
ACCESSION   XM_071830105
VERSION     XM_071830105.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3386
                     /gene="LOC139839900"
                     /note="mitogen-activated protein kinase kinase kinase
                     YODA-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 19 Proteins"
                     /db_xref="GeneID:139839900"
     CDS             360..2945
                     /gene="LOC139839900"
                     /codon_start=1
                     /product="mitogen-activated protein kinase kinase kinase
                     YODA-like"
                     /protein_id="XP_071686206.1"
                     /db_xref="GeneID:139839900"
                     /translation="MPSWWGKSSSKESKKKTSKESIIDTIRKFRIPSDKKTSNRSGVS
                     RRGCNDTVSELGSLSRVESRSVSPSRESKLVARCQSFQERPQAQPLPLPIHPSRVTRT
                     ESCISNVSGKSRQEKGSKTSPIVQLSHTGYTRTRPDAADLDGADSVFSECYSDSDDPP
                     DSSQLSPLASDYDTGSRTTAGSPSNMIVKDQLHVTKNYSRDVAKPPENLFGNHISSSP
                     TRRKPLSSHVPNIQVPYNGAFFSAPDSSISSPSRSPLRAFGTEQVINSAFYSSKPNHD
                     FPFLGSGHCSSPGSGQNSGHNSMGGDMAGLFWQPSRGSPEYSPLPSPKMSSPGPSSRI
                     HSGAVTPLHPRAGGESRPEDVKQKSHRLPLPPVMISNSLPFSQSNSAATSPSVPRSPG
                     RSDNLPSPGSRWKKGKLLGRGSFGHVYVGFNSESGEMCAMKEVALFSDDAKSKESAKQ
                     LGQEVSLLSRLSHPNIVQYYGSEMVDDKLYIYLEYVSGGSIYKLLQDYGKFGELAIRS
                     YTQQILSGLAYLHAKNTIHRDIKGANILVDPNGRVKLADFGMAKHITGQTCPLSFKGS
                     PYWMAPEIIKNSNGSNLAVDIWSLGCTVLEMATTKPPWSQYEGVAALFKIGNSKELPV
                     IPDHLSEEGKDFVRQCLQRNPLHRPTAAQLLDHCFVKNAAPLERLVSCSDQPDLFHAV
                     VNGAKSPGIGHPRNRQTLDSDRLTTHSFRVPRPGFNSSEVQIPRNISCPVSPIGSPLI
                     HSRSPQHINGRLSPSPITSPRTTSGASTPQINNGSKIPIRHVNQSVYLHEISRPTNVS
                     YRDPVPDMFRANPLGAPGSSPRKQFGGLTHELRGGQVVLVDSVSHLLLRDKVNFKPSL
                     DLNPS"
     misc_feature    1566..2339
                     /gene="LOC139839900"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Plant Mitogen-Activated Protein (MAP)/Extracellular
                     signal-Regulated Kinase (ERK) Kinase Kinase 1; Region:
                     STKc_MEKK1_plant; cd06632"
                     /db_xref="CDD:270802"
     misc_feature    order(1587..1601,1611..1613,1650..1652,1656..1658,
                     1758..1760,1806..1817,1824..1829,1836..1838,1944..1946,
                     1950..1961,1965..1967,1995..2000,2007..2009,2046..2057,
                     2061..2063,2145..2147,2172..2174)
                     /gene="LOC139839900"
                     /note="active site"
                     /db_xref="CDD:270802"
     misc_feature    order(1587..1601,1611..1613,1650..1652,1656..1658,
                     1758..1760,1806..1817,1821..1829,1836..1838,1956..1961,
                     1965..1967,1995..2003)
                     /gene="LOC139839900"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270802"
     misc_feature    order(1596..1601,1944..1946,1950..1958,2007..2009,
                     2046..2057,2061..2063,2145..2147,2172..2174)
                     /gene="LOC139839900"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270802"
     misc_feature    order(1995..2030,2037..2063)
                     /gene="LOC139839900"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270802"
ORIGIN      
        1 gaacatcact tggaaacctc acaattccaa aatcatttct tttttctttt ttaaattatt
       61 atttgttttt ctcgttgtaa cttattatta ttagcttaat tcagacgtca acagtttgtt
      121 caatcaactc ctgctccttc tttgcatttc tcaactgcta ataatcaaca gatgccacat
      181 cttataacga atctgagtct acacagaagt gttagagctt aattatagaa gtgtgactta
      241 tcataacctt caaaacgaga cagccgggat aatttcatgt gaagggattg acgattgata
      301 gtggatcttt gactttgact ttgggttcca gttcttcttc tgtaacttat tagacaaata
      361 tgccttcatg gtggggtaag tcatcatcaa aagaatcaaa gaagaagaca agcaaagaga
      421 gtattatcga tacaattagg aaatttagga tcccttcaga taaaaaaaca tcaaacagat
      481 caggtgtgtc tcgaaggggt tgcaatgaca cagtttcaga gcttgggtca ctatcacggg
      541 tcgaatctag gtccgtttca ccttctagag aatccaaact agtggctaga tgtcaaagct
      601 ttcaagaaag acctcaggct caaccactcc cacttcctat tcacccgtcc cgtgtgactc
      661 gaaccgagtc atgtatcagt aacgtgtcgg gaaaatcgag acaagaaaag gggtccaaaa
      721 cgtcaccaat tgttcaactt tcccatacgg gttacacaag gaccaggcct gatgctgcag
      781 atttggatgg agccgattct gtgtttagtg aatgttatag tgatagtgat gatccacctg
      841 actcgagcca gcttagccca ttggcgtctg attatgatac tgggagtcga acgacagctg
      901 gaagcccttc caatatgatt gtcaaggatc agttgcatgt aacgaagaat tattcaaggg
      961 atgtagcaaa accacctgag aatctttttg gtaatcacat atcgtcttca ccaactagaa
     1021 gaaaaccgct aagcagtcat gtacctaata tccaagtacc gtacaatggt gcgttcttta
     1081 gtgcaccaga cagttcaata tcgagccctt ctagaagtcc actacgagca ttcggaaccg
     1141 aacaagttat aaattctgct ttttattctt caaaaccgaa tcatgacttt ccttttcttg
     1201 gatcgggaca ctgctcaagc cccgggtcgg gtcaaaattc gggtcataat tctatgggtg
     1261 gtgacatggc gggcttattt tggcaaccga gtaggggtag tccagaatat tctccacttc
     1321 ctagccccaa aatgtcgagt ccgggcccca gttctagaat ccatagtggt gcggttacac
     1381 cgcttcatcc aagagctgga ggcgagtctc gacccgaaga tgtaaaacaa aaaagtcaca
     1441 ggctgccact gccacctgtc atgatttcga attcgttacc tttttcccaa tcgaattcag
     1501 ctgcaacatc gccttctgta ccacgaagcc cggggcggtc ggataattta cccagcccgg
     1561 gttcaagatg gaaaaagggg aagctgttgg gtcgaggctc atttgggcat gtttatgttg
     1621 gtttcaacag tgaaagtggt gaaatgtgcg ctatgaagga agttgcattg ttttccgatg
     1681 acgcaaagtc aaaagaaagt gcaaaacaat tgggccaaga agtttcgttg ttgagccggt
     1741 taagtcatcc aaatattgtg caatactatg ggtctgaaat ggttgatgac aaactttaca
     1801 tatatttgga atacgtttct ggtggttcaa tatataaact tctccaagat tatggaaaat
     1861 ttggtgaact ggctattcga agttatactc agcagatctt gtcagggcta gcatatctac
     1921 atgcgaaaaa taccatccat agggatatca aaggagcaaa tatccttgtt gacccaaatg
     1981 gtcgagtcaa gttggcagat tttggaatgg caaaacatat cacagggcaa acatgtccat
     2041 tgtcatttaa agggagtccg tactggatgg cacctgagat tatcaagaat agcaatggtt
     2101 caaatcttgc tgttgacata tggagtcttg ggtgtacagt tttagaaatg gcaacaacca
     2161 aaccaccttg gagtcagtat gagggggttg ctgcattgtt taagattgga aacagtaaag
     2221 aactccctgt tattcctgat catctttcgg aagaggggaa ggattttgta aggcaatgtc
     2281 tacagaggaa tccgcttcat cgtcctacag ccgctcaatt attggatcac tgctttgtta
     2341 aaaatgctgc tcctttagaa aggctcgtat catgttcaga tcaacccgat ctatttcatg
     2401 ccgttgtgaa tggggcaaaa tcaccgggaa ttggacatcc aagaaatcgg caaacattgg
     2461 attcggatag actcactacc cattcatttc gagtaccaag accaggtttc aattccagtg
     2521 aagttcaaat accaaggaat atatcctgcc ccgtttcacc aattggaagt ccgctaatac
     2581 attcaagatc acctcaacac ataaacggac ggttatcacc atcacccata actagcccac
     2641 gaaccacttc aggtgcatcc actcctcaaa tcaataacgg ctccaaaatc ccaatccgtc
     2701 atgttaacca atcggtttac ctgcacgaga tctcaagacc gaccaacgtt tcgtaccgtg
     2761 atccggtccc tgatatgttc cgagccaacc cgttgggggc tcctgggtct agcccaagaa
     2821 aacaattcgg tgggctcact catgaacttc gtggaggaca ggtggtcttg gttgactcgg
     2881 tatctcatct acttttgagg gacaaagtga actttaaacc atctttagat ttaaacccat
     2941 cgtaaggtgc acatatcatc ttcattcatt ttaaaagcaa aatcgggatt atagcaggtt
     3001 taaagacgtt aagcggctta aattcttgat atgtaatctg attttgctta tatattgagt
     3061 tctgcaacca tcaatttgac ttgaccttga gttgtggaaa aaggttttat taactggtta
     3121 tttgtggtgg taaaaacgac atttcacata tagaagatta ggaattagga gaataaacta
     3181 gagttggggg tattttttta tttttttttt ggttttggga agctgaatct ggtgtacata
     3241 aaatgcagaa tcagcattgc atttgtgtta atcacacttt gtactggcaa attgtatatg
     3301 tatctatcag tatgtacgat ttgttgcatg taccatgtac tttagtgaat tgagttattt
     3361 attctggagt tcttgaattg tctttt
//
LOCUS       XM_071830106            1225 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides short-chain dehydrogenase
            TIC 32, chloroplastic-like (LOC139839901), mRNA.
ACCESSION   XM_071830106
VERSION     XM_071830106.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1225
                     /gene="LOC139839901"
                     /note="short-chain dehydrogenase TIC 32,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 51 Proteins"
                     /db_xref="GeneID:139839901"
     CDS             66..1118
                     /gene="LOC139839901"
                     /codon_start=1
                     /product="short-chain dehydrogenase TIC 32,
                     chloroplastic-like"
                     /protein_id="XP_071686207.1"
                     /db_xref="GeneID:139839901"
                     /translation="MMLQLRWLVLSRDICEQRVHAIVDDAGRVNKKNMWLFGRPGPSG
                     FSQYSTAEQVTNGIDASGLTAIVTGGSSGIGRETARVLALRGAHVVMGVRNLAAGKQV
                     QEEIVKEIPTAKVDAMELDLNSMASVRKFASDFNSTGQSLNLLINNAGIMMTPFLLSK
                     DNIELQFATNHLGHFLLTYLLLDNMKKTARKSKKEGRIVNLSSEAHRITYPEGIRFDK
                     INVEKEYSKYQAYGQSKLANILHANELTRHFKEEGVEITANSLHPGVIQTNLFRHIFT
                     PPTFAEGFVKKLSSCFMKNVEQGAATTCYVALHPQVKGVSGAYFSDSNLAKTTEQAKD
                     MDLAKRLWDFSMNLIK"
     misc_feature    249..1091
                     /gene="LOC139839901"
                     /note="retinol dehydrogenase (retinol-DH), Light dependent
                     Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and
                     related proteins, classical (c) SDRs; Region:
                     retinol-DH_like_SDR_c_like; cd05327"
                     /db_xref="CDD:212492"
     misc_feature    order(270..272,276..287,342..350,423..431,507..515,
                     570..572,684..692,756..758,768..770,852..863,867..872)
                     /gene="LOC139839901"
                     /note="putative NAD(P) binding site [chemical binding];
                     other site"
                     /db_xref="CDD:212492"
     misc_feature    order(573..575,690..692,756..758,768..770)
                     /gene="LOC139839901"
                     /note="active site"
                     /db_xref="CDD:212492"
     polyA_site      1225
                     /gene="LOC139839901"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attataatat ctggtgataa acacaaaatt agttgaaagt gaaattttgt tataataatc
       61 taaaaatgat gcttcagttg agatggttgg ttctgagtcg tgatatttgt gagcaaaggg
      121 tacacgccat tgtggatgat gcgggtagag taaataagaa gaatatgtgg ctgtttggaa
      181 gaccaggacc atctggattc tcacaatatt caaccgctga acaggttacc aatggaattg
      241 atgcatctgg tctcaccgcc attgttacag gaggatcaag tggcattggt cgtgaaacag
      301 cgcgagtact tgccctgcgt ggggcccatg tcgttatggg tgtcagaaat ttggctgctg
      361 gcaaacaggt tcaagaagaa atagtgaaag aaattccaac agccaaagtt gatgcaatgg
      421 agttagatct caattccatg gcatccgtta ggaaattcgc gtccgacttc aattcaactg
      481 gtcaatcatt aaacttgtta ataaacaatg caggtataat gatgactcca ttcttgcttt
      541 ctaaagataa catagaacta cagtttgcca ccaaccattt aggtcacttt cttcttacct
      601 atctgttgct cgataatatg aagaaaacag cacgtaaaag taagaaagag ggaagaattg
      661 tgaatttatc atcagaggcc cataggatta cttatcctga aggaattcgt ttcgataaaa
      721 ttaatgttga aaaagagtac agtaaatatc aagcgtatgg tcaatcaaag ctagcgaaca
      781 ttcttcatgc taatgagctc accagacatt ttaaggaaga gggagttgaa ataactgcaa
      841 attctcttca tccaggagta attcaaacaa atttgttccg ccacattttt actcctccca
      901 cctttgctga aggctttgtt aagaaactca gcagttgttt catgaaaaat gttgaacagg
      961 gggccgcaac gacgtgctat gtagcactgc acccacaagt gaaaggggta agtggtgcat
     1021 atttttcaga tagcaactta gcgaaaacaa cagagcaggc taaagacatg gatttggcta
     1081 agcgattatg ggattttagc atgaatttaa ttaagtaaac atcaacattc gcactttgta
     1141 gagatcatgg tttatttctg tgaaagtcat aaagtgcaag tgagtgtttc cattgagata
     1201 tattggattt tttttcattt gctta
//
LOCUS       XM_071830107            1250 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides short-chain dehydrogenase
            TIC 32, chloroplastic-like (LOC139839902), transcript variant X1,
            mRNA.
ACCESSION   XM_071830107
VERSION     XM_071830107.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1250
                     /gene="LOC139839902"
                     /note="short-chain dehydrogenase TIC 32,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 52 Proteins"
                     /db_xref="GeneID:139839902"
     CDS             27..1082
                     /gene="LOC139839902"
                     /codon_start=1
                     /product="short-chain dehydrogenase TIC 32,
                     chloroplastic-like isoform X1"
                     /protein_id="XP_071686208.1"
                     /db_xref="GeneID:139839902"
                     /translation="MYGTIFHLIFYCKLSLGTVQFGAIVPRQVLNKKNMWLFGRPGPS
                     GFSQYSTAEQVTNGIDASGLTAIVTGGSSGIGRETARVLALRGAHVVMGVRNLAAGKQ
                     VQEEIVKEIPTAKVDAMELDLNSMASVRKFASDFNSTGQSLNLLINNAGIMMTPFLLS
                     KDNIELQFATNHLGHFLLTHLLLDNMKKTASKSKKEGRIVNLSSEAHRITYPEGIRFD
                     KINVEKEYSKYQAYGQSKLANILHANELTRHFKEEGVEITANSLHPGVIQTNLFRHIF
                     TPPTFAEGFVKKLSSCFMKNVEQGAATTCYVALHPQVKGVSGAYFSDSNLAKTTEQAK
                     DMDLAKRLWDFSMNLIK"
     misc_feature    213..1055
                     /gene="LOC139839902"
                     /note="retinol dehydrogenase (retinol-DH), Light dependent
                     Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and
                     related proteins, classical (c) SDRs; Region:
                     retinol-DH_like_SDR_c_like; cd05327"
                     /db_xref="CDD:212492"
     misc_feature    order(234..236,240..251,306..314,387..395,471..479,
                     534..536,648..656,720..722,732..734,816..827,831..836)
                     /gene="LOC139839902"
                     /note="putative NAD(P) binding site [chemical binding];
                     other site"
                     /db_xref="CDD:212492"
     misc_feature    order(537..539,654..656,720..722,732..734)
                     /gene="LOC139839902"
                     /note="active site"
                     /db_xref="CDD:212492"
     polyA_site      1250
                     /gene="LOC139839902"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacaaaccta attaaccaaa ccaataatgt atggtacgat cttccatctt attttctatt
       61 gcaaactgag tcttgggacg gtccagtttg gtgcgattgt accacgtcaa gtcctaaata
      121 agaagaatat gtggctgttt ggaagaccag gaccatctgg attctcacaa tattcaaccg
      181 ctgaacaggt taccaatgga attgatgcat ctggtctcac cgccattgtt acaggaggat
      241 caagcggcat tggtcgtgaa acagcgcgag tacttgccct gcgtggggcc catgtcgtta
      301 tgggtgtcag aaatttggct gctggcaaac aggttcaaga agaaatagtg aaagaaattc
      361 caacagccaa agttgatgca atggagttag atctcaattc catggcatcc gttaggaaat
      421 tcgcgtccga cttcaattca actggtcaat cattaaactt gttaataaac aatgcaggta
      481 taatgatgac tccattcttg ctttctaaag ataacataga actacagttt gccaccaacc
      541 atttaggtca ctttcttctt acccatctgt tgctcgataa tatgaagaaa acagcaagta
      601 aaagtaagaa agagggaaga attgtgaatt tatcatcaga ggcccatagg attacttatc
      661 ctgaaggaat tcgtttcgat aaaattaatg ttgaaaaaga gtacagtaaa tatcaagcgt
      721 atggtcaatc aaagctagcg aacattcttc atgctaatga gctcaccaga cattttaagg
      781 aggagggagt tgaaataact gcaaattctc ttcatccagg agtaattcaa acaaatttgt
      841 tccgccacat ttttactcct cccacctttg ctgaaggctt tgttaagaaa ctcagcagtt
      901 gtttcatgaa aaatgttgaa cagggggccg caacgacatg ctatgtagca ctgcacccac
      961 aagtgaaagg ggtaagtggt gcatattttt cagatagcaa cttagcgaaa acaacagagc
     1021 aggctaaaga catggatttg gctaagcgat tatgggattt tagcatgaat ttaattaagt
     1081 aaacatcaac attcacacca tgtagagatc atggtttatt tctgtgaaag tcataaagtg
     1141 taagtgagtg tttccattga gatatattgg attttttttc atttgcttac atgcaaaagt
     1201 gtagctattt ataccgagtt tagttggatc gatccctata gtttttacta
//
LOCUS       XM_071830108            1291 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides short-chain dehydrogenase
            TIC 32, chloroplastic-like (LOC139839902), transcript variant X2,
            mRNA.
ACCESSION   XM_071830108
VERSION     XM_071830108.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1291
                     /gene="LOC139839902"
                     /note="short-chain dehydrogenase TIC 32,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 52 Proteins"
                     /db_xref="GeneID:139839902"
     CDS             71..1123
                     /gene="LOC139839902"
                     /codon_start=1
                     /product="short-chain dehydrogenase TIC 32,
                     chloroplastic-like isoform X2"
                     /protein_id="XP_071686209.1"
                     /db_xref="GeneID:139839902"
                     /translation="MMLQLRWLVLSRDICEQRVHAIVDDAGRVNKKNMWLFGRPGPSG
                     FSQYSTAEQVTNGIDASGLTAIVTGGSSGIGRETARVLALRGAHVVMGVRNLAAGKQV
                     QEEIVKEIPTAKVDAMELDLNSMASVRKFASDFNSTGQSLNLLINNAGIMMTPFLLSK
                     DNIELQFATNHLGHFLLTHLLLDNMKKTASKSKKEGRIVNLSSEAHRITYPEGIRFDK
                     INVEKEYSKYQAYGQSKLANILHANELTRHFKEEGVEITANSLHPGVIQTNLFRHIFT
                     PPTFAEGFVKKLSSCFMKNVEQGAATTCYVALHPQVKGVSGAYFSDSNLAKTTEQAKD
                     MDLAKRLWDFSMNLIK"
     misc_feature    254..1096
                     /gene="LOC139839902"
                     /note="retinol dehydrogenase (retinol-DH), Light dependent
                     Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and
                     related proteins, classical (c) SDRs; Region:
                     retinol-DH_like_SDR_c_like; cd05327"
                     /db_xref="CDD:212492"
     misc_feature    order(275..277,281..292,347..355,428..436,512..520,
                     575..577,689..697,761..763,773..775,857..868,872..877)
                     /gene="LOC139839902"
                     /note="putative NAD(P) binding site [chemical binding];
                     other site"
                     /db_xref="CDD:212492"
     misc_feature    order(578..580,695..697,761..763,773..775)
                     /gene="LOC139839902"
                     /note="active site"
                     /db_xref="CDD:212492"
     polyA_site      1291
                     /gene="LOC139839902"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaatattat aatatctggt gataaacaca aaattagttg aaagtgaaat tttgttataa
       61 taatctaaaa atgatgcttc agttgagatg gttggttctg agtcgtgata tttgtgagca
      121 aagggtacac gccattgtgg atgatgcggg tagagtaaat aagaagaata tgtggctgtt
      181 tggaagacca ggaccatctg gattctcaca atattcaacc gctgaacagg ttaccaatgg
      241 aattgatgca tctggtctca ccgccattgt tacaggagga tcaagcggca ttggtcgtga
      301 aacagcgcga gtacttgccc tgcgtggggc ccatgtcgtt atgggtgtca gaaatttggc
      361 tgctggcaaa caggttcaag aagaaatagt gaaagaaatt ccaacagcca aagttgatgc
      421 aatggagtta gatctcaatt ccatggcatc cgttaggaaa ttcgcgtccg acttcaattc
      481 aactggtcaa tcattaaact tgttaataaa caatgcaggt ataatgatga ctccattctt
      541 gctttctaaa gataacatag aactacagtt tgccaccaac catttaggtc actttcttct
      601 tacccatctg ttgctcgata atatgaagaa aacagcaagt aaaagtaaga aagagggaag
      661 aattgtgaat ttatcatcag aggcccatag gattacttat cctgaaggaa ttcgtttcga
      721 taaaattaat gttgaaaaag agtacagtaa atatcaagcg tatggtcaat caaagctagc
      781 gaacattctt catgctaatg agctcaccag acattttaag gaggagggag ttgaaataac
      841 tgcaaattct cttcatccag gagtaattca aacaaatttg ttccgccaca tttttactcc
      901 tcccaccttt gctgaaggct ttgttaagaa actcagcagt tgtttcatga aaaatgttga
      961 acagggggcc gcaacgacat gctatgtagc actgcaccca caagtgaaag gggtaagtgg
     1021 tgcatatttt tcagatagca acttagcgaa aacaacagag caggctaaag acatggattt
     1081 ggctaagcga ttatgggatt ttagcatgaa tttaattaag taaacatcaa cattcacacc
     1141 atgtagagat catggtttat ttctgtgaaa gtcataaagt gtaagtgagt gtttccattg
     1201 agatatattg gatttttttt catttgctta catgcaaaag tgtagctatt tataccgagt
     1261 ttagttggat cgatccctat agtttttact a
//
LOCUS       XM_071830109            1213 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides short-chain dehydrogenase
            TIC 32, chloroplastic-like (LOC139839902), transcript variant X3,
            mRNA.
ACCESSION   XM_071830109
VERSION     XM_071830109.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1213
                     /gene="LOC139839902"
                     /note="short-chain dehydrogenase TIC 32,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 52 Proteins"
                     /db_xref="GeneID:139839902"
     CDS             92..1045
                     /gene="LOC139839902"
                     /codon_start=1
                     /product="short-chain dehydrogenase TIC 32,
                     chloroplastic-like isoform X3"
                     /protein_id="XP_071686210.1"
                     /db_xref="GeneID:139839902"
                     /translation="MWLFGRPGPSGFSQYSTAEQVTNGIDASGLTAIVTGGSSGIGRE
                     TARVLALRGAHVVMGVRNLAAGKQVQEEIVKEIPTAKVDAMELDLNSMASVRKFASDF
                     NSTGQSLNLLINNAGIMMTPFLLSKDNIELQFATNHLGHFLLTHLLLDNMKKTASKSK
                     KEGRIVNLSSEAHRITYPEGIRFDKINVEKEYSKYQAYGQSKLANILHANELTRHFKE
                     EGVEITANSLHPGVIQTNLFRHIFTPPTFAEGFVKKLSSCFMKNVEQGAATTCYVALH
                     PQVKGVSGAYFSDSNLAKTTEQAKDMDLAKRLWDFSMNLIK"
     misc_feature    176..1018
                     /gene="LOC139839902"
                     /note="retinol dehydrogenase (retinol-DH), Light dependent
                     Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and
                     related proteins, classical (c) SDRs; Region:
                     retinol-DH_like_SDR_c_like; cd05327"
                     /db_xref="CDD:212492"
     misc_feature    order(197..199,203..214,269..277,350..358,434..442,
                     497..499,611..619,683..685,695..697,779..790,794..799)
                     /gene="LOC139839902"
                     /note="putative NAD(P) binding site [chemical binding];
                     other site"
                     /db_xref="CDD:212492"
     misc_feature    order(500..502,617..619,683..685,695..697)
                     /gene="LOC139839902"
                     /note="active site"
                     /db_xref="CDD:212492"
     polyA_site      1213
                     /gene="LOC139839902"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttatgtatg aaatatgaat atgaattgtg ataataataa ctgataataa agtgtggtgg
       61 cgcatcaatt ccaattacaa ataagaagaa tatgtggctg tttggaagac caggaccatc
      121 tggattctca caatattcaa ccgctgaaca ggttaccaat ggaattgatg catctggtct
      181 caccgccatt gttacaggag gatcaagcgg cattggtcgt gaaacagcgc gagtacttgc
      241 cctgcgtggg gcccatgtcg ttatgggtgt cagaaatttg gctgctggca aacaggttca
      301 agaagaaata gtgaaagaaa ttccaacagc caaagttgat gcaatggagt tagatctcaa
      361 ttccatggca tccgttagga aattcgcgtc cgacttcaat tcaactggtc aatcattaaa
      421 cttgttaata aacaatgcag gtataatgat gactccattc ttgctttcta aagataacat
      481 agaactacag tttgccacca accatttagg tcactttctt cttacccatc tgttgctcga
      541 taatatgaag aaaacagcaa gtaaaagtaa gaaagaggga agaattgtga atttatcatc
      601 agaggcccat aggattactt atcctgaagg aattcgtttc gataaaatta atgttgaaaa
      661 agagtacagt aaatatcaag cgtatggtca atcaaagcta gcgaacattc ttcatgctaa
      721 tgagctcacc agacatttta aggaggaggg agttgaaata actgcaaatt ctcttcatcc
      781 aggagtaatt caaacaaatt tgttccgcca catttttact cctcccacct ttgctgaagg
      841 ctttgttaag aaactcagca gttgtttcat gaaaaatgtt gaacaggggg ccgcaacgac
      901 atgctatgta gcactgcacc cacaagtgaa aggggtaagt ggtgcatatt tttcagatag
      961 caacttagcg aaaacaacag agcaggctaa agacatggat ttggctaagc gattatggga
     1021 ttttagcatg aatttaatta agtaaacatc aacattcaca ccatgtagag atcatggttt
     1081 atttctgtga aagtcataaa gtgtaagtga gtgtttccat tgagatatat tggatttttt
     1141 ttcatttgct tacatgcaaa agtgtagcta tttataccga gtttagttgg atcgatccct
     1201 atagttttta cta
//
LOCUS       XM_071830110            1993 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SWI/SNF complex component
            SNF12 homolog (LOC139839903), mRNA.
ACCESSION   XM_071830110
VERSION     XM_071830110.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1993
                     /gene="LOC139839903"
                     /note="SWI/SNF complex component SNF12 homolog; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139839903"
     CDS             188..1825
                     /gene="LOC139839903"
                     /codon_start=1
                     /product="SWI/SNF complex component SNF12 homolog"
                     /protein_id="XP_071686211.1"
                     /db_xref="GeneID:139839903"
                     /translation="MAGGSNNMNNSIKNIGSVSGPTGFGNSGATIPPTQSMGPPLNNS
                     NNQLSEPQAQALAHAQYVQAQAQAQARAAHARFQAQLQAQAQATQAQSVTQKQSLLGG
                     VNNNSNSNVGASSPSLSTPMNAKRSGQKPSSRVPSSSGGAAGSPLKTMELTPAARRRK
                     RGPPENQIPEKVAAILSESALYTQLLEFEGRVDAALARKKVDIQDSVKNPPRLPKMLR
                     IYVFNTFVNQTQTGSLKENAELPSWSLKILGRLLENGSDQQKSGSMNPKFSSFFKKTT
                     IYLDQNQYPDNHVILWESSRSLALNEGFEVKRKGDTEFTAIIRLEMNYTPEKFKLSPA
                     LSEILGLEVETRPRIIAAIWQYVKNKNLQISTDTSFFTCDPPLRKLFGEEKVKFSMVS
                     QKISHHLSPPQPIHLEHKIKLSGDNPSGNTCYDVLVDVPFSLDKDMSNFLENMEKQRE
                     VDACDVAICSAIKKIHEHRRRRAFFLGFSQSPSEFVDAFIASQSKDLKTAAGDATRDA
                     EKERRSEFYNQPWVEDAVIRYLNRKPAAGSEAPPGSI"
     misc_feature    1178..1384
                     /gene="LOC139839903"
                     /note="SWIB domain found in the 60 kda subunit of the
                     ATP-dependent SWI/SNF chromatin-remodeling complexes and
                     similar proteins; Region: SWIB_like; cd10568"
                     /db_xref="CDD:349490"
     misc_feature    order(1226..1228,1235..1240,1244..1249,1256..1261,
                     1274..1276,1289..1294,1298..1300,1349..1351,1358..1363)
                     /gene="LOC139839903"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:349490"
ORIGIN      
        1 acgaagccgc aaaactattg agaagagaaa aaatcatcac aaagattcat ctcacaagat
       61 cggaatttaa tttaaattta aatttaaatt cctttaaaaa gaaaccccaa atttcaacaa
      121 gcattacatg cgtggtttcg attgaaagta ttgattagga ttcttttgac aagaatttga
      181 gaatataatg gcaggcggta gtaataatat gaataattct ataaaaaata ttggcagtgt
      241 aagtggacca actggttttg gtaattcagg tgcaacaata ccacctactc aatctatggg
      301 accaccattg aacaactcga acaaccagtt gtctgagccg caggctcagg cattagctca
      361 cgctcagtat gttcaagctc aggctcaagc acaggctcga gctgctcatg cccggtttca
      421 ggctcagtta caagctcaag ctcaagcaac acaagcacaa tcggttactc agaagcaaag
      481 tttattagga ggggttaata ataatagtaa tagtaacgtt ggagcttcat caccatcact
      541 tagtactcct atgaatgcga aaagatcggg tcaaaaaccg tcttctcggg ttccgagttc
      601 ttcgggtggt gctgctggtt cgcctttaaa aaccatggag cttacacctg cggcccgtag
      661 acgaaaacgg ggcccacccg agaaccaaat tcctgaaaaa gtagccgcca ttttgtcaga
      721 atcagctctt tatactcaat tgctggaatt tgagggtcgt gtagatgcgg ctttagcgag
      781 aaaaaaagtt gatattcaag attctgttaa gaatcctcct cggttgccaa aaatgctcag
      841 gatttacgtt ttcaacacgt tcgtaaacca aacccaaacc ggatctctaa aggaaaatgc
      901 tgagttacct tcttggtctc tcaagattct tggtaggcta ttagaaaatg ggtcggatca
      961 acaaaaatcg ggctctatga acccaaagtt ttcatctttt ttcaagaaaa ccactattta
     1021 cttggaccaa aatcagtacc cagataacca tgtgatcttg tgggaaagtt ctagatcttt
     1081 ggcacttaac gagggttttg aagtgaagag aaaaggggat acagagttta ctgctataat
     1141 ccgattagaa atgaattaca cacctgaaaa attcaaactt tcacccgctt taagtgaaat
     1201 tcttggacta gaggtcgaga cccgcccaag aattatcgct gcaatatggc aatatgtgaa
     1261 aaataaaaac ttacaaatct cgaccgatac ttcattcttc acatgtgatc ctcctcttag
     1321 gaaactattc ggtgaagaaa aggtgaaatt ttcaatggtt tctcaaaaga tttcacatca
     1381 tttgagccca cctcagccta tacatttgga gcataagatc aagctttcgg gagataatcc
     1441 atccggaaat acatgttacg atgttcttgt tgatgttcct ttttcattag ataaagacat
     1501 gtctaatttt ttggaaaata tggagaaaca aagggaggtt gatgcttgtg atgtagcgat
     1561 ttgctctgca attaaaaaga tccatgaaca tagaagaaga cgagctttct ttttagggtt
     1621 tagtcagtca ccgagtgaat ttgttgatgc gtttattgca tcacagagta aggatttgaa
     1681 aacggctgct ggtgatgcta ctcgtgatgc tgagaaagag cgaaggtccg agttctataa
     1741 tcaaccatgg gtcgaagatg ctgttattcg ttacttgaac agaaaaccgg ctgcaggaag
     1801 tgaagcacca cctggaagca tatagtttaa gatagttgat aaatagtttc atatgtgggc
     1861 catggggata atttctgatc taacaactta agttatccta cttggtgcag tattagattt
     1921 tagttttgtt tgtttctttg ataatttctt gtaatatttg tttgactttg taggagtttc
     1981 ttgttatgat aat
//
LOCUS       XR_011757145             214 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839904), ncRNA.
ACCESSION   XR_011757145
VERSION     XR_011757145.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..214
                     /gene="LOC139839904"
                     /note="uncharacterized LOC139839904; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839904"
     ncRNA           1..214
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839904"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839904"
ORIGIN      
        1 caaatccctg atgtcttctc ttacaaaacc cacccacttt tcttctttcc ctacaaaatc
       61 tctatcttcc ccattactaa atctatctca gttccattaa actatcaact ccactttctc
      121 tccataaaaa tttattacgg agtacaaggt taaacaatat aacctaatat caaatacgga
      181 gtatcaaggt aactttatga aactaataaa gttc
//
LOCUS       XM_071830111            4304 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tripeptidyl-peptidase 2
            (LOC139839905), mRNA.
ACCESSION   XM_071830111
VERSION     XM_071830111.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4304
                     /gene="LOC139839905"
                     /note="tripeptidyl-peptidase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839905"
     CDS             1..4116
                     /gene="LOC139839905"
                     /codon_start=1
                     /product="tripeptidyl-peptidase 2"
                     /protein_id="XP_071686212.1"
                     /db_xref="GeneID:139839905"
                     /translation="MHSGCLFKGPYVSIFQSSFSTPFLSHNFNLLITSKSKIKIKIKN
                     NNTTSKKTCEIRAMPASSSSSIDNNGALRKFKLNESSFLASLMPKKEIGADRFIEANP
                     EFDGRGVVVAIFDSGVDPAAAGLQVTSDGKPKVLDVIDCTGSGDIDTSTVVKADANGC
                     IRGASGASLIINPSWSNPSGDWHVGYKLVYELLTDTLVSRLKKERKKRWDEKNQETIA
                     EAVKQLEEFDKKQTKVDELKLKRTRTDLQDRVDYLKKQTDSYDDKGPVIDAVVWHDGE
                     VWRVALDTQSLEDEPECGKLADFVPLTNYKIERKYGVFSKLDACTFVTNVYNEGTILS
                     IVTDSSPHGTHVAGIATAFHPTEPLLNGIAPGAQVVSCKIGDSRLGSMETGTGLIRAL
                     IAVVEHKCDVINMSYGESTMLPNYGRFVELVDEVVNKYRVVFVSSAGNNGPALTTVGA
                     PGGTTSSIIGVGAYVSPAMAAGAHALVEAPPEGLEYTWSSRGPTADGDLGVYVSAPGG
                     AVAPVPTWTLQRRQLMNGTSMSSPSACGGVALVISAMKAEGINVSPYSVRKALENTCS
                     PIGCLPEDKLSNGHGLLQIDKAFEYAQKSADLPCLWYKIAISQAGKTTASTVRGIYLR
                     EASYCNQTTEWTVQVEPQFHEGASNLEQLVPFEECIELHSSGKEVVKAPDFLLLTYNG
                     RSFNVVVDPTKLSDGLHYFEVYGIDCNAPWRGPLFRIPITITKPKIVETRPPVITFSG
                     LSFQPGHIVRKYIEVPYGATWVEATMRTSGFDTARRFYIDVVQLSPLKRPITWESNPS
                     FSSPSTKSFTFSVEGGRTMELVISQFWSSGIGSHETAVVDFEIAFHGIDVSTDEVVLD
                     GSEAPVRLEARALLSSEKLAPIAKLNKIRVPYRPIDSKMSALSADRDKLPSGKQILAL
                     TLTYKFKLEDEAEVKPQIPLLNNRIYDNKFESQFYMISDSNKRVYAKGDVYPAYVKLP
                     KGEYTLQLLLRNENVQYLEKLKQLVLFIERKLGKEAMQLSFYTQPDGPVTGTGSFTSS
                     TLDPGSKEAFYVGPPSKDKLPKSSPAGSVLVGAISYGKPSSEVSDNGNDPEKNPVSYT
                     INYQVPPTKVEEDKGKNSTSKTSTKSVEERLEEEVRDTKIKVLANLKQGTEDERAEWQ
                     KLSISLKTEYPKYTPLLAQILEGLLSQEVEDKIHHYEEIIGAADEVIESIDRDELARF
                     LSIKGDPEEEEFEKNKKKMETTRDQLVESLYQKGLAIVELVSLKGEMAALAANLGAEV
                     VDRPDGQASAGGGVGQPDLFEDTFKELQKWADAKSSKYNTLLLIRGRHSGRLGTALKV
                     VNSMIEEEGDPAKKQLYEERISLLEQIGWGHLATYEKLWMLVRFPSSLPLF"
     misc_feature    256..1704
                     /gene="LOC139839905"
                     /note="Peptidase S8 family domain in Tripeptidyl
                     aminopeptidases_II; Region:
                     Peptidases_S8_Tripeptidyl_Aminopeptidase_II; cd04857"
                     /db_xref="CDD:173796"
     misc_feature    order(343..345,1024..1026,1582..1584)
                     /gene="LOC139839905"
                     /note="putative catalytic triad [active]"
                     /db_xref="CDD:173796"
     misc_feature    order(784..786,1024..1026,1216..1224,1318..1320,
                     1582..1584)
                     /gene="LOC139839905"
                     /note="putative active site [active]"
                     /db_xref="CDD:173796"
     misc_feature    2602..3156
                     /gene="LOC139839905"
                     /note="Tripeptidyl peptidase II; Region: TPPII; pfam12580"
                     /db_xref="CDD:463636"
     polyA_site      4304
                     /gene="LOC139839905"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgcacagtg gatgtttatt taaaggaccg tacgtgtcaa tattccaatc atcattttct
       61 acgccgtttc tctctcataa tttcaatcta ctcattacgt ccaaatccaa aattaaaatt
      121 aaaataaaaa ataataacac tacaagtaaa aaaacttgtg aaattagggc aatgcctgct
      181 tcatcatcat cttctatcga taataatggc gctttacgta agtttaagct gaacgaatcg
      241 tcgtttttag catcgctcat gccgaagaaa gaaatcggtg ccgatagatt catcgaagcg
      301 aatccggagt ttgacggacg cggtgttgtt gttgcgattt ttgattctgg tgttgatccg
      361 gctgctgcgg ggttgcaggt gacctctgat gggaagccaa aagtcctaga tgttattgat
      421 tgcactggga gcggtgatat cgatacctct actgttgtga aggctgatgc aaatggctgt
      481 attcgtggag catcaggggc atcccttatt attaatcctt cttggagcaa cccttctgga
      541 gactggcatg ttggatataa gttggtgtat gaacttctta cggacacatt agtatctcgt
      601 ttgaagaaag aaagaaagaa aaggtgggac gagaagaatc aagaaacaat tgctgaggct
      661 gtaaagcaac ttgaagagtt tgacaagaag caaacaaagg ttgatgagtt gaaattaaaa
      721 aggactcgca cagatctaca ggatagagtt gattatttga agaaacaaac agatagctat
      781 gatgacaagg gtcccgttat cgatgctgtt gtatggcatg atggagaagt gtggagggtt
      841 gctcttgaca cacagagtct cgaggatgaa cccgagtgtg ggaagcttgc tgattttgtt
      901 cccttaacta attacaagat tgaacgcaag tatggtgtct ttagcaagtt agatgcttgt
      961 acattcgtga ccaatgtata taatgaaggt accattttga gtatagttac tgatagttca
     1021 ccgcatggca ctcacgttgc tggtattgcc actgctttcc acccaacgga accattgctg
     1081 aatggaattg cccctggagc acaggtagtt tcatgtaaaa ttggagactc gcgcttaggt
     1141 tctatggaaa ctggaacagg tttgatacgc gcactaattg ctgttgtgga gcacaaatgt
     1201 gatgttatca acatgagcta tggtgaatct acaatgttac cgaactatgg acgctttgta
     1261 gagctcgttg atgaggtggt taataaatac cgtgtagtat tcgtaagcag tgctggcaac
     1321 aacgggcccg cattgaccac tgtgggtgca cctgggggca ccacatcgag cataatagga
     1381 gttggtgctt atgtttctcc tgctatggct gctggagctc atgctttagt tgaggcacca
     1441 cctgaagggc tcgagtacac ttggtctagt cggggaccca ctgctgatgg agatcttggt
     1501 gtgtatgtaa gtgctcctgg tggggccgtg gcccctgttc ctacatggac tcttcagcgg
     1561 cgccaactta tgaacggtac atcaatgtca tccccatctg catgtggtgg agtagctctg
     1621 gttatcagtg caatgaaggc tgaggggatt aatgtgagtc catacagcgt gaggaaggct
     1681 cttgagaata cttgttctcc aattggctgt ttgccagaag ataaactatc taatggacat
     1741 ggtctacttc aaattgacaa ggcttttgaa tatgctcaga aatcagctga tttgccatgc
     1801 ctgtggtaca agatagcaat aagtcaggca ggaaaaacaa cagcatcaac agtgcgaggc
     1861 atatacctga gagaggctag ttattgcaat caaaccactg agtggacagt gcaagttgaa
     1921 ccacagtttc atgaaggtgc aagtaattta gaacagttgg tcccatttga agagtgtatc
     1981 gagctacatt ctagcggaaa ggaagtcgta aaagctcccg attttctcct gctcacttac
     2041 aatggacgta gcttcaatgt ggttgtagat cctacgaagc ttagtgatgg tttacattat
     2101 tttgaagtgt acggtataga ctgcaacgct ccctggcgtg gtcctctttt cagaatacca
     2161 attactatta caaaaccaaa aattgtggaa actcgacctc cagtaattac gttttctgga
     2221 ctgtctttcc agccagggca tattgtacgc aaatacattg aggtaccata cggtgctact
     2281 tgggttgagg caaccatgcg cacctcaggg tttgacactg ctagaaggtt ttacattgat
     2341 gttgtccagc tctctccatt gaagaggcca atcacatggg aaagtaatcc atcattttca
     2401 tctccatcaa ccaagagctt taccttttct gttgagggtg gtcgaaccat ggaattagtg
     2461 atatcgcaat tctggtctag tggcatagga agtcacgaaa ctgctgttgt ggatttcgag
     2521 atagcgttcc atgggataga tgttagcaca gatgaggtgg ttcttgatgg aagtgaagcg
     2581 cctgttagac ttgaagcccg agctctgtta tcatctgaga agcttgctcc aatcgccaag
     2641 cttaacaaga ttagagtccc gtatcgtcct attgattcaa aaatgagtgc tctttcagca
     2701 gatcgagata aattaccttc tggcaaacag atacttgcgt taacattaac ttacaagttc
     2761 aaactggaag atgaagcaga agtaaaacct caaataccct tacttaacaa tcgtatctat
     2821 gataacaagt ttgaatccca attttatatg atttcggatt cgaacaagcg tgtatatgca
     2881 aagggtgatg tctatcctgc atatgtaaaa ttgcctaaag gtgaatacac tttacaactg
     2941 ctcttgagga atgagaatgt gcagtactta gagaaattga agcaattagt gttgttcatt
     3001 gaaagaaaat tgggcaagga ggccatgcaa ttgagctttt atactcaacc agatggtcca
     3061 gtcacgggta ctggtagctt cacatcttca acattagatc ctggatcaaa agaagcattt
     3121 tatgtaggac ctccatctaa ggacaagctt cctaagagtt ctccagcagg atctgtacta
     3181 gttggagcaa tttcttatgg aaagccttca tctgaggttt ctgataatgg aaatgaccct
     3241 gaaaagaatc ccgtatcgta tacgataaat tatcaagtcc caccaactaa agttgaggag
     3301 gataagggaa agaattcaac ttccaaaaca tccacaaaaa gtgtcgaaga acgtttagag
     3361 gaagaggtcc gtgacaccaa gattaaagtt cttgcaaacc tcaaacaagg cacagaagat
     3421 gaacgtgcag aatggcaaaa attatccatc tcactgaaga cggaatatcc aaaatacact
     3481 cccttgctgg ctcaaatatt ggaggggctc ttatcccagg aagtagaaga taaaatacac
     3541 cactatgaag agataattgg tgcagcagat gaggtaattg agagtattga cagagacgaa
     3601 ttagcaagat ttctttccat caaaggtgat cctgaagagg aagaatttga gaaaaacaag
     3661 aagaaaatgg agacgacgcg tgaccaactg gttgaatccc tttaccaaaa aggtttagct
     3721 atagtggaac ttgtgtcact caagggtgag atggctgcat tggctgcaaa cttaggtgca
     3781 gaagttgtgg atagacctga tggtcaagca tctgcaggag gcggtgttgg tcaaccagac
     3841 ctgtttgaag acactttcaa agagctgcaa aaatgggcag atgctaaatc atccaaatat
     3901 aacactcttc tgttgatacg tggacgacat agtggaagac tcggcactgc acttaaggtg
     3961 gtgaacagta tgattgaaga agaaggtgat ccggcaaaga agcagctata tgaagaaaga
     4021 atctcgttgc ttgaacaaat tgggtggggc cacctggcga cgtatgagaa actgtggatg
     4081 ctcgtacgct ttccatcgag cttaccttta ttctagtgga ctttcgaccc cgttgataaa
     4141 ctagatgtag actagtttgt tactatttat ttaataagcg catcgcatcg catatcccaa
     4201 atacattttc ttctgacgtt gtactctgtt tggtacactg atcaatggtt gtgtaaagtt
     4261 ttacttcaga ttgatcttaa tgatattttt ctatagttgt gtac
//
LOCUS       XR_011757146             288 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839906), ncRNA.
ACCESSION   XR_011757146
VERSION     XR_011757146.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..288
                     /gene="LOC139839906"
                     /note="uncharacterized LOC139839906; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839906"
     ncRNA           1..288
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839906"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839906"
ORIGIN      
        1 catactagca catcgtttga ttttagcttc tcgaattgat agcaagctcc ttggtgtatg
       61 aactattttc atattccgaa acaagataat ataaggtgat aagagtaagc agaagactca
      121 gtaatattag accactgagt acttgtggat atcggttgat ggttatatca tgctactttt
      181 tgggtgaaga tgggatgtct agtggatatg tttgacaacc tttggaaatc tgatgtcgtg
      241 attttgtaat aaaggaactg ttttgttaag taacaccata ttgtgggt
//
LOCUS       XM_071830112            2776 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NLP5-like
            (LOC139839907), transcript variant X1, mRNA.
ACCESSION   XM_071830112
VERSION     XM_071830112.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2776
                     /gene="LOC139839907"
                     /note="protein NLP5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839907"
     CDS             273..2600
                     /gene="LOC139839907"
                     /codon_start=1
                     /product="protein NLP5-like isoform X1"
                     /protein_id="XP_071686213.1"
                     /db_xref="GeneID:139839907"
                     /translation="MDENTLNFEISSDPLMDFNYMDELLSDGCWLQAATDGSESSNNN
                     TPASNPLFTCSFQWPDLEPDPVSDDIIMLAPETYSSKPHFENLVNSPNQCVSDFMGAC
                     LGPSSYSIMERLIYAIDSIKHYTIDKNVLIQVWLPEVIRCKKVLTTVQRLFSLELSCP
                     RLSTYRNISESYHFSAEGDAKESVGLPGRVFMEKVPKWTPDVRLFKVEEYPRVSHAQQ
                     HGVCGSVAVPVFDQDVMNCIGVFEVVMTTQKSNYSLEIQSVCKALEAVDLRSCEDSNT
                     QIIKVNHGFYHLALSEIHEALKSACMMHNLPLGQTWIPCIQQGGKGGCRHSNENLINC
                     ISTVDSASYVSDHPRFKDFQEACSQHHLFIGQGVVGKAFETNNLCYSPDVTSSYSKTE
                     YPLAHHAKIFDLHADVAIRLTTKFAPSVDFVLEFVLPVECHNFNDLIDSLLIIIKKVC
                     VSLTIVTEIELQEEVVVSDTEQVLKVQEEAHGVGASSGMEKRRAGVKMETTITLEMLR
                     QHFACSLKDAAKNLGVCPTTLKRICRRQGIQRWPSRKIKKVGHSLKKMQLVMDSVHGG
                     SGSFQLESIYSNFRKLDSPDPSKPTDVPFSTTKIRTFDVKEAADDTTSCIPSSSGPYH
                     IPIADEDTSSNVALKSTSNDRNQNDQDKDQEPEILIIRSDSHKSLNEPPKLGHHLWRV
                     KVKFGEENIRFRMQKDWGYKELLQETAKRFNLNEIGGYYLRYLDDDSEWVLLTCDADV
                     EECIDLYRSSMDGGTIRLVLRQSQLRVGSNSSSSC"
     misc_feature    1773..1919
                     /gene="LOC139839907"
                     /note="RWP-RK domain; Region: RWP-RK; pfam02042"
                     /db_xref="CDD:460427"
     misc_feature    2313..2558
                     /gene="LOC139839907"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; Region: PB1_NLP;
                     cd06407"
                     /db_xref="CDD:99728"
ORIGIN      
        1 ccacattatt tattcatctt attacatcaa ccctcttcac tttttaattg tattctcctt
       61 gattcataga agttaataat tcatcatata gagttgaatc tatcctttct tgaaggatca
      121 tgatcacccg tgggtatccc taggggggct aatagtgggg cttcagcagg attggaacga
      181 aaaacaaagg tttcaagaac atagaaattg aagaaactca aagctgatta catgatcaat
      241 cttttttgtg tggattttgt taaagattag ccatggatga aaatacatta aattttgaaa
      301 tttcatctga cccgcttatg gatttcaatt acatggatga actattgtcc gatggatgtt
      361 ggttacaagc agcgactgat ggatccgaaa gctcaaacaa taacactcct gcttctaatc
      421 ccctttttac ttgttcattt caatggcccg atttggaacc tgacccagtg tcagatgata
      481 ttataatgtt agctcctgaa acatattcgt cgaaacccca tttcgaaaac ctcgttaatt
      541 cgccaaatca atgtgtttcc gactttatgg gggcttgttt aggcccttca tcatattcta
      601 taatggaaag attgatatat gcaattgaca gcataaaaca ttacaccatt gacaaaaacg
      661 tacttattca agtatggtta ccagaagtta taagatgcaa gaaagttcta actacagttc
      721 aacgactttt ctcacttgaa ctgagttgtc ctagactttc tacttataga aacatatcag
      781 aaagttatca tttttcagcc gaaggtgatg ctaaagaaag tgttggatta ccaggaaggg
      841 tatttatgga aaaagttccc aaatggactc ctgatgttcg gctttttaag gtcgaagaat
      901 atcctagagt ttctcatgct caacaacatg gtgtttgtgg aagtgttgct gttcctgttt
      961 tcgatcaaga tgttatgaat tgcattggtg tttttgaggt tgtaatgacg actcaaaaga
     1021 gtaattattc tctcgagatt caaagtgttt gtaaagctct tgaggccgtt gacctccgga
     1081 gttgtgaaga ttcaaacaca caaattatca aggtaaacca cggcttctat catcttgcat
     1141 tatcggagat tcacgaagct ctaaaatctg catgcatgat gcataattta ccattaggtc
     1201 aaacatggat tccgtgcatc caacaaggcg gaaaaggtgg ttgccgccat tcaaatgaga
     1261 acttaatcaa ctgtatatcc accgttgatt ctgcttcata cgtatctgac cacccaagat
     1321 tcaaagattt tcaagaagct tgttctcaac atcacttgtt tataggtcaa ggtgttgtag
     1381 gaaaagcttt tgaaaccaac aatctgtgtt attcacctga tgtgacatca tcatatagta
     1441 aaacagagta cccgcttgct catcatgcta aaatctttga cttgcatgct gatgtggcta
     1501 tacgtcttac aactaaattt gctcctagtg ttgactttgt gttggaattt gtcttgcccg
     1561 ttgagtgcca taattttaat gatctgatcg attctctatt gattatcatt aaaaaggttt
     1621 gtgtaagctt gacgatcgtt acagaaatag agttgcagga agaggtagtt gtgtctgata
     1681 cagaacaggt gctaaaagtt caagaagaag cacatggtgt gggtgcgagt tcagggatgg
     1741 agaaacgacg tgctggtgtt aagatggaga cgacaataac tttagaaatg ctaaggcaac
     1801 attttgcttg cagcctgaaa gatgcagcca agaatttggg tgtttgtcca acaactctca
     1861 aacggatatg cagacgacaa gggatacaac gttggccatc tcggaagatc aagaaagtgg
     1921 gccactcgtt aaagaaaatg cagttagtga tggactcagt tcatggtggt tcaggttcat
     1981 ttcagttgga atctatttat tcaaacttcc gaaaactcga ttctcctgat ccatcaaaac
     2041 cgactgatgt tccattttct actacaaaga tcagaacttt tgacgtaaaa gaggcagccg
     2101 atgacacaac atcatgcatc ccgagttcaa gtgggcccta ccatatccca attgctgacg
     2161 aagataccag cagcaatgta gctcttaaaa gtacatcaaa tgatcgaaat cagaatgatc
     2221 aggataaaga tcaggaacca gagatcttaa taatacgatc tgacagtcat aaatcgctca
     2281 acgagccacc aaagttgggg catcatctgt ggagggtaaa agtgaaattt ggggaagaaa
     2341 atatacgttt taggatgcaa aaagattggg ggtacaaaga attgttgcaa gaaacagcaa
     2401 agaggtttaa tttaaatgag attggtgggt attacttgag gtatttggat gatgattcag
     2461 aatgggtgtt actaacttgt gatgcggatg tcgaggagtg tattgatttg taccgatcgt
     2521 ctatggatgg tgggaccatt aggcttgttc ttcgccagtc gcaacttcgt gttggtagta
     2581 atagtagtag tagttgttaa ggcagcaatg gaccctgcac catggttcga gacatttctt
     2641 ggatattgat gcttttaaag aactaaacat ttctttcaaa taaagtcagt ttaatatcac
     2701 taaatctttt tatgtttgaa aactttggct ggctggttta tgttgtatta gtaagataag
     2761 tgccgattct ttcttt
//
LOCUS       XM_071830113            2638 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NLP5-like
            (LOC139839907), transcript variant X2, mRNA.
ACCESSION   XM_071830113
VERSION     XM_071830113.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2638
                     /gene="LOC139839907"
                     /note="protein NLP5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139839907"
     CDS             348..2462
                     /gene="LOC139839907"
                     /codon_start=1
                     /product="protein NLP5-like isoform X2"
                     /protein_id="XP_071686214.1"
                     /db_xref="GeneID:139839907"
                     /translation="MLAPETYSSKPHFENLVNSPNQCVSDFMGACLGPSSYSIMERLI
                     YAIDSIKHYTIDKNVLIQVWLPEVIRCKKVLTTVQRLFSLELSCPRLSTYRNISESYH
                     FSAEGDAKESVGLPGRVFMEKVPKWTPDVRLFKVEEYPRVSHAQQHGVCGSVAVPVFD
                     QDVMNCIGVFEVVMTTQKSNYSLEIQSVCKALEAVDLRSCEDSNTQIIKVNHGFYHLA
                     LSEIHEALKSACMMHNLPLGQTWIPCIQQGGKGGCRHSNENLINCISTVDSASYVSDH
                     PRFKDFQEACSQHHLFIGQGVVGKAFETNNLCYSPDVTSSYSKTEYPLAHHAKIFDLH
                     ADVAIRLTTKFAPSVDFVLEFVLPVECHNFNDLIDSLLIIIKKVCVSLTIVTEIELQE
                     EVVVSDTEQVLKVQEEAHGVGASSGMEKRRAGVKMETTITLEMLRQHFACSLKDAAKN
                     LGVCPTTLKRICRRQGIQRWPSRKIKKVGHSLKKMQLVMDSVHGGSGSFQLESIYSNF
                     RKLDSPDPSKPTDVPFSTTKIRTFDVKEAADDTTSCIPSSSGPYHIPIADEDTSSNVA
                     LKSTSNDRNQNDQDKDQEPEILIIRSDSHKSLNEPPKLGHHLWRVKVKFGEENIRFRM
                     QKDWGYKELLQETAKRFNLNEIGGYYLRYLDDDSEWVLLTCDADVEECIDLYRSSMDG
                     GTIRLVLRQSQLRVGSNSSSSC"
     misc_feature    1635..1781
                     /gene="LOC139839907"
                     /note="RWP-RK domain; Region: RWP-RK; pfam02042"
                     /db_xref="CDD:460427"
     misc_feature    2175..2420
                     /gene="LOC139839907"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; Region: PB1_NLP;
                     cd06407"
                     /db_xref="CDD:99728"
ORIGIN      
        1 ccacattatt tattcatctt attacatcaa ccctcttcac tttttaattg tattctcctt
       61 gattcataga agttaataat tcatcatata gagttgaatc tatcctttct tgaaggatca
      121 tgatcacccg tgggtatccc taggggggct aatagtgggg cttcagcagg attggaacga
      181 aaaacaaagg tttcaagaac atagaaattg aagaaactca aagctgatta catgcgactg
      241 atggatccga aagctcaaac aataacactc ctgcttctaa tccccttttt acttgttcat
      301 ttcaatggcc cgatttggaa cctgacccag tgtcagatga tattataatg ttagctcctg
      361 aaacatattc gtcgaaaccc catttcgaaa acctcgttaa ttcgccaaat caatgtgttt
      421 ccgactttat gggggcttgt ttaggccctt catcatattc tataatggaa agattgatat
      481 atgcaattga cagcataaaa cattacacca ttgacaaaaa cgtacttatt caagtatggt
      541 taccagaagt tataagatgc aagaaagttc taactacagt tcaacgactt ttctcacttg
      601 aactgagttg tcctagactt tctacttata gaaacatatc agaaagttat catttttcag
      661 ccgaaggtga tgctaaagaa agtgttggat taccaggaag ggtatttatg gaaaaagttc
      721 ccaaatggac tcctgatgtt cggcttttta aggtcgaaga atatcctaga gtttctcatg
      781 ctcaacaaca tggtgtttgt ggaagtgttg ctgttcctgt tttcgatcaa gatgttatga
      841 attgcattgg tgtttttgag gttgtaatga cgactcaaaa gagtaattat tctctcgaga
      901 ttcaaagtgt ttgtaaagct cttgaggccg ttgacctccg gagttgtgaa gattcaaaca
      961 cacaaattat caaggtaaac cacggcttct atcatcttgc attatcggag attcacgaag
     1021 ctctaaaatc tgcatgcatg atgcataatt taccattagg tcaaacatgg attccgtgca
     1081 tccaacaagg cggaaaaggt ggttgccgcc attcaaatga gaacttaatc aactgtatat
     1141 ccaccgttga ttctgcttca tacgtatctg accacccaag attcaaagat tttcaagaag
     1201 cttgttctca acatcacttg tttataggtc aaggtgttgt aggaaaagct tttgaaacca
     1261 acaatctgtg ttattcacct gatgtgacat catcatatag taaaacagag tacccgcttg
     1321 ctcatcatgc taaaatcttt gacttgcatg ctgatgtggc tatacgtctt acaactaaat
     1381 ttgctcctag tgttgacttt gtgttggaat ttgtcttgcc cgttgagtgc cataatttta
     1441 atgatctgat cgattctcta ttgattatca ttaaaaaggt ttgtgtaagc ttgacgatcg
     1501 ttacagaaat agagttgcag gaagaggtag ttgtgtctga tacagaacag gtgctaaaag
     1561 ttcaagaaga agcacatggt gtgggtgcga gttcagggat ggagaaacga cgtgctggtg
     1621 ttaagatgga gacgacaata actttagaaa tgctaaggca acattttgct tgcagcctga
     1681 aagatgcagc caagaatttg ggtgtttgtc caacaactct caaacggata tgcagacgac
     1741 aagggataca acgttggcca tctcggaaga tcaagaaagt gggccactcg ttaaagaaaa
     1801 tgcagttagt gatggactca gttcatggtg gttcaggttc atttcagttg gaatctattt
     1861 attcaaactt ccgaaaactc gattctcctg atccatcaaa accgactgat gttccatttt
     1921 ctactacaaa gatcagaact tttgacgtaa aagaggcagc cgatgacaca acatcatgca
     1981 tcccgagttc aagtgggccc taccatatcc caattgctga cgaagatacc agcagcaatg
     2041 tagctcttaa aagtacatca aatgatcgaa atcagaatga tcaggataaa gatcaggaac
     2101 cagagatctt aataatacga tctgacagtc ataaatcgct caacgagcca ccaaagttgg
     2161 ggcatcatct gtggagggta aaagtgaaat ttggggaaga aaatatacgt tttaggatgc
     2221 aaaaagattg ggggtacaaa gaattgttgc aagaaacagc aaagaggttt aatttaaatg
     2281 agattggtgg gtattacttg aggtatttgg atgatgattc agaatgggtg ttactaactt
     2341 gtgatgcgga tgtcgaggag tgtattgatt tgtaccgatc gtctatggat ggtgggacca
     2401 ttaggcttgt tcttcgccag tcgcaacttc gtgttggtag taatagtagt agtagttgtt
     2461 aaggcagcaa tggaccctgc accatggttc gagacatttc ttggatattg atgcttttaa
     2521 agaactaaac atttctttca aataaagtca gtttaatatc actaaatctt tttatgtttg
     2581 aaaactttgg ctggctggtt tatgttgtat tagtaagata agtgccgatt ctttcttt
//
LOCUS       XM_071830115             543 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides actin-depolymerizing factor
            7-like (LOC139839908), mRNA.
ACCESSION   XM_071830115
VERSION     XM_071830115.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..543
                     /gene="LOC139839908"
                     /note="actin-depolymerizing factor 7-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 71 Proteins"
                     /db_xref="GeneID:139839908"
     CDS             130..543
                     /gene="LOC139839908"
                     /codon_start=1
                     /product="actin-depolymerizing factor 7-like"
                     /protein_id="XP_071686216.1"
                     /db_xref="GeneID:139839908"
                     /translation="MANAASGMAVDDECKLKFLELKAKRNYRFIIFKIEEQKVIVEKV
                     GSPDESYENFTNSLPINECRYAVYDFDFTTDENCQKSKIFFIAWAPDTSKVRAKMVYA
                     SSKDRFKRELDGIQVELQATDPSEMSLDIVKGRAI"
     misc_feature    139..537
                     /gene="LOC139839908"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; Region: ADF_gelsolin; cl15697"
                     /db_xref="CDD:472830"
     misc_feature    145..150
                     /gene="LOC139839908"
                     /note="putative G-actin interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:200442"
     misc_feature    order(367..369,373..375,415..417,496..498,505..507)
                     /gene="LOC139839908"
                     /note="putative F-actin interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:200442"
ORIGIN      
        1 gtctaatttc ttttcactaa aactttcatt ttcaaccatc tttttctttc cctttcatac
       61 tttattttct ttctcttaat ttgttgcaat cttgttatca atatctaatc tttcatcaca
      121 acaccaacca tggcaaacgc tgcgtctgga atggctgtgg atgatgaatg taagttgaag
      181 tttttggagc taaaagcgaa acgaaactac cgattcatta ttttcaagat cgaagaacaa
      241 aaagtgattg ttgaaaaggt tggaagcccc gatgagagct acgagaattt cacaaactca
      301 cttcctatta atgaatgtcg ctacgctgtc tatgactttg actttacgac cgatgaaaat
      361 tgccaaaaaa gcaagatctt cttcattgca tgggcccctg atacgtcaaa agtgagagca
      421 aaaatggtgt atgcaagctc taaggacagg ttcaagagag aattggatgg gattcaagtt
      481 gagttgcaag ctacggaccc aagtgagatg agtctcgata ttgtaaaagg acgagcaatt
      541 taa
//
LOCUS       XM_071830116            1045 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides membrane steroid-binding
            protein 2-like (LOC139839909), mRNA.
ACCESSION   XM_071830116
VERSION     XM_071830116.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1045
                     /gene="LOC139839909"
                     /note="membrane steroid-binding protein 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139839909"
     CDS             5..793
                     /gene="LOC139839909"
                     /codon_start=1
                     /product="membrane steroid-binding protein 2-like"
                     /protein_id="XP_071686217.1"
                     /db_xref="GeneID:139839909"
                     /translation="MLNRHTQVDLYHTHTYTQLVNQVMAVELLETLKEAITAYTGLSP
                     NTFFTVIAAGIAVYYVVSVLFGSDNTPQHRPRSFEEDVQPLPPPVQLGEISEEELKAY
                     DGNDSGKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGD
                     ISGLGAFELDALQDWEYKFMSKYVKVGTIKKPEGAPEASTAPEPVEPTAAEPSTAPEP
                     AEPTAAEPLTTTAHVSEPTQAKEPTEAKEEKEETSTTAEVSKDE"
     misc_feature    287..475
                     /gene="LOC139839909"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     Region: Cyt-b5; pfam00173"
                     /db_xref="CDD:459698"
     misc_feature    <566..>718
                     /gene="LOC139839909"
                     /note="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase, long form; Region: PDHac_trf_long;
                     TIGR01348"
                     /db_xref="CDD:273566"
     polyA_site      1045
                     /gene="LOC139839909"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgaatgcta aataggcaca cacaagtaga tctttatcac acacacacat acacacaact
       61 cgtgaatcaa gtcatggctg ttgaattact agagacccta aaagaagcca taaccgcata
      121 caccggactc tctccaaaca ccttcttcac cgtcatcgcc gccggtatcg ccgtctatta
      181 tgtcgtctcc gttttattcg gatccgataa cactccacaa caccggccac ggtctttcga
      241 agaagatgtt caaccgcttc caccgccggt tcaactcggc gagatttccg aagaggaatt
      301 gaaagcatac gacggcaacg attccggaaa accgcttctt atggccatca aaggtcagat
      361 ctatgatgtc tcacagagca ggatgttcta cgggccaggt gggccatatg cgttgtttgc
      421 aggaaaggat gctagcagag ctcttgcaaa aatgtcattt gaagagaaag atttaaccgg
      481 tgatatttca ggtcttggtg cttttgagct cgatgcattg caagattggg aatacaagtt
      541 catgagcaag tatgttaagg tgggaaccat caagaagccc gaaggtgcac ctgaggcatc
      601 aactgcacct gaacctgtcg agccaactgc tgcagaacca tcaactgcac ctgaacctgc
      661 cgagccaact gctgcagaac cattaacgac tactgctcat gtctcagagc ccacacaagc
      721 taaagagccc accgaagcta aagaggaaaa agaagaaact tcaactacag cggaagtcag
      781 taaggatgag tagaggtttg atggtcaccg agtagggttt gtttgggtgc ctgtgatctg
      841 aatattatat ctttatgaca agttataact cctataatca tgtattaatc aatcaatgaa
      901 tgactaagat aaacctactt atttcatgat acttcataat gtggagttta tatttatatt
      961 aaaacctagt gttttgcctt tttaaataat gtaagcaact gatggtgagt ggtggttgat
     1021 catattgtgg ttgtgttctg acatc
//
LOCUS       XM_071830117             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CEN-like protein 1
            (LOC139839910), mRNA.
ACCESSION   XM_071830117
VERSION     XM_071830117.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139839910"
                     /note="CEN-like protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 73
                     Proteins"
                     /db_xref="GeneID:139839910"
     CDS             1..525
                     /gene="LOC139839910"
                     /codon_start=1
                     /product="CEN-like protein 1"
                     /protein_id="XP_071686218.1"
                     /db_xref="GeneID:139839910"
                     /translation="MSRSMIDPLAVGRVIGEVVDMFTPSVKLSVTYNLNKTVSNGHEL
                     MPNLITYKPRVDIGGEDMRSAYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDALF
                     GREIVSYETPKPVIGIHRYVFLLFKQKTRKSVCPPASRDHFNTRSFCQEHGLGLPVAA
                     VYYNAQRENAARRR"
     misc_feature    1..522
                     /gene="LOC139839910"
                     /note="PhosphatidylEthanolamine-Binding Protein (PEBP)
                     domain; Region: PEBP; cl00227"
                     /db_xref="CDD:469671"
     misc_feature    order(214..216,256..258,262..264,331..339,355..357,
                     361..363)
                     /gene="LOC139839910"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:176644"
ORIGIN      
        1 atgtcaagat caatgattga tccacttgca gtaggaagag ttattggaga agtggtggac
       61 atgttcacac caagtgttaa gttgagtgta acctataatc tcaataagac agtctctaat
      121 ggccatgaac tcatgcctaa tttaatcact tataaacctc gtgtcgatat tggaggtgaa
      181 gacatgagat ctgcttatac tcttatcatg acagatcctg atgttccagg cccaagtgat
      241 ccttacctaa gagaacatct tcactggatc gttacagaca ttcctggtac aacggatgct
      301 ttgtttggaa gggagattgt gagctatgag acaccaaagc cagtgatagg gattcatcga
      361 tacgtgttct tactgtttaa acaaaaaacg aggaaatcgg tgtgtccacc ggcttcaaga
      421 gaccatttta acactcgtag cttctgtcaa gaacatggtt taggattacc agttgctgct
      481 gtctattata atgctcaaag agaaaatgct gctcgtcgaa gatga
//
LOCUS       XM_071830118            1987 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            XBAT33-like (LOC139839911), mRNA.
ACCESSION   XM_071830118
VERSION     XM_071830118.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1987
                     /gene="LOC139839911"
                     /note="E3 ubiquitin-protein ligase XBAT33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139839911"
     CDS             219..1754
                     /gene="LOC139839911"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase XBAT33-like"
                     /protein_id="XP_071686219.1"
                     /db_xref="GeneID:139839911"
                     /translation="MGNSFGCSASGERLVSAARDGDLVEAKMLLDCNPCLAKYSTFGG
                     LNSPLHFAAAKGHNDIVALLLDNGADVNSRNYCGQTALMQACRYGHWEVGQTLLLFRC
                     NVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSTPFEATDEQVNSDEGNVPKNKY
                     DQSALVKLVNKAADGGITALHMAALNGYADCVQLLLDLHANTSAVTFHYGTSMDMIGA
                     GSTPLHYAACGGNLKCSQILLARGASRLTLNCNGWLPLDVARMWGRHWLEPLLAPNSD
                     LAIPSFPASNYLALPLMSVLNIARECGLQLPATLSDDTDICAVCLERTCTVAAEGCRH
                     ELCVRCALYLCSTSNNPSESLDPPGSISCPLCRHGIIAFTKLPGSPAKDIKLHLSLAF
                     CTPCMLHPREPTESTPPGTPEIIKNQADSVSPELFCPVTCSPFPSVSIPPLCTCSDGS
                     CPSSETRDDEARDGSPSHRTVSGEEGKFGAIRVERRTRCSKMFWGRRSCSREQQCNSE
                     INA"
     misc_feature    258..1055
                     /gene="LOC139839911"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    order(354..356,366..371,378..386,390..395,405..407,
                     414..416,441..443,447..449,453..455,465..470,477..485,
                     489..494,504..506,513..515,540..542,549..551,555..557,
                     567..572,579..587,591..596,606..608)
                     /gene="LOC139839911"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    354..443
                     /gene="LOC139839911"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    447..542
                     /gene="LOC139839911"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    741..836
                     /gene="LOC139839911"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    840..947
                     /gene="LOC139839911"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1155..1328
                     /gene="LOC139839911"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(1167..1169,1176..1178,1212..1214,1218..1220,
                     1227..1229,1236..1238,1305..1307,1314..1316)
                     /gene="LOC139839911"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438506"
ORIGIN      
        1 tattaggtgg aactaggaat gaagagcaac aatataaaca caacaatggt gaaaacaaac
       61 aacacaatcc actaatctca agcttccact tccaaaacaa aaccctaatt tcttacagtt
      121 gacctaattt ccagtcacac aagttattat ttattattta ttataatttt ttaaacaaaa
      181 caaaaaaccc tcactcaaca actgattcac aaacagagat ggggaattca ttcggttgtt
      241 cagcttccgg cgaacgattg gtatcggcgg caagagacgg tgatttggta gaagctaaaa
      301 tgttacttga ttgtaatcca tgtttagcta aatactctac ttttggtggt cttaattcac
      361 ctcttcattt tgctgctgct aaaggccata acgatattgt tgcgttgttg cttgataatg
      421 gagctgatgt taattctagg aattattgtg gtcagacggc tttgatgcaa gcttgtcgat
      481 acgggcattg ggaagttggt caaacgcttt tgctctttag atgcaatgtt acgagggccg
      541 actatcttag tgggagaact gctctccatt tcgctgctgt aaatgggcat gtacgttgca
      601 tacgtcttgt tgtggctgat tttgtgccta gtactccttt tgaagctaca gatgaacaag
      661 tgaattcaga tgaaggcaat gttcccaaaa acaaatatga ccaaagtgca ctggtcaagc
      721 ttgtaaataa agctgctgat ggtggtataa cagctcttca tatggctgca ttaaatggat
      781 atgctgattg tgtacaactg cttctagatt tgcatgcaaa tacgtcagca gtaacttttc
      841 attatgggac gtcaatggat atgataggag ctggaagcac tcctttgcat tatgctgctt
      901 gtggtggaaa tttaaaatgt agtcagattc tactcgcaag aggtgctagt cgtttgacat
      961 taaactgcaa tgggtggctt cctcttgacg tggcaagaat gtgggggcgt cattggcttg
     1021 aacccttatt ggctcccaat tctgacctgg caataccgtc gttccctgcg tctaattatt
     1081 tggcattgcc tctcatgagt gtactcaata tagcaagaga gtgtggtttg cagttaccag
     1141 caaccctttc cgatgacact gatatttgtg ctgtctgcct ggagagaacc tgcacagtgg
     1201 ctgctgaagg ttgcaggcat gaactgtgtg tgcgatgtgc actttattta tgctcaacaa
     1261 gcaataaccc atctgaatca ttagacccac ccggatccat ttcatgccca ttatgccgac
     1321 acggcatcat tgcattcacc aaattaccag gctctcctgc aaaagatatc aaactacatc
     1381 tttcactcgc tttctgtact ccatgcatgc ttcatcctcg ggaaccaacc gagtctacgc
     1441 cacctggcac ccccgagatc atcaagaacc aggcagattc cgtttcacca gaattattct
     1501 gcccggttac ttgcagccct tttccttctg tttccattcc gcctttgtgc acctgcagcg
     1561 atggctcgtg cccgtcttcc gaaacacgag acgatgaggc tcgagatggt tcaccgtctc
     1621 accggaccgt ttcaggtgag gaaggtaaat ttggtgcaat tagggttgag agaagaacaa
     1681 ggtgttcaaa gatgttttgg ggaaggagaa gctgtagtag ggaacaacag tgcaattcag
     1741 aaatcaatgc ttgattggag atggtgtaaa atgcaggtac ttcatctgtt tgtgaaagcc
     1801 tggtgcgatt gaaacttaga ttaaagaaga cgaagtaggt atgttttatg ggatttatta
     1861 tagaatgtgt tggcaggaaa aatgggtttg tacaaaaaca aaaacagacg catgtttgtt
     1921 gggtatatat attattattt attactcgta attattacta gtattagttt atttctgaaa
     1981 ttaatac
//
LOCUS       XR_011757147            3933 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-processing enzyme
            beta-isozyme-like (LOC139839912), transcript variant X1, misc_RNA.
ACCESSION   XR_011757147
VERSION     XR_011757147.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3933
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3933
                     /gene="LOC139839912"
                     /note="vacuolar-processing enzyme beta-isozyme-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839912"
     misc_RNA        1..3933
                     /gene="LOC139839912"
                     /product="vacuolar-processing enzyme beta-isozyme-like,
                     transcript variant X1"
                     /db_xref="GeneID:139839912"
ORIGIN      
        1 tcgatcaatt catacactct ttaataatcc catggctgct tctcaccact tgttgttcgt
       61 gttattccta accctaaccc taaccctact tgtgctacaa ctctctgaag cttcccgttc
      121 cagctttttc tctttgcgta ggtcgaaatt gaaaggcaag aaggctcaat cttttgagtc
      181 catgggtgtt gtcgaccaaa gagatgcaga tgtttattca atgtggcatc agtacaagag
      241 tttaaccgaa aattcacaag agaaagagga attactcaag aaaattaaaa gaattacatc
      301 acatagggca catttggata atagtattga tataatccgg ggcaagttat tacaaggaga
      361 aatagcagtt aggcctagtg gaatggccat tgtggacgat tgggactgtc ttaaaaccat
      421 ggtgcgaact tatgagacac attgtggatc attgactcat tatggtatgc ttcatacact
      481 atttgctgac ctgtgcaaca ataatattag caaggaagct atggatgaag ctgcaaaggc
      541 aacatgtagc tcgtacgaca tgggacaatg ggatcctgca attgttggtt atagtgcata
      601 atcgatctag aataatgggc ttcagaagct gccaccatag ccatttgtgc tgctaaaatg
      661 ggtttggtga taccaaccgc cattgttgat gtaactacca cctggcctga ttctctttcc
      721 attgtactcg ctcgcaatta caacacaaaa tgaagatacg tttgtgaact atttgaaaag
      781 tatggagaga taacggattc agtaataatg gaagatccat gaattgctca actgatgggt
      841 tttgtaacca gattgcaaaa gtttcataga aacaatttaa ggattagcta tctgcgacac
      901 aacaagaaag acgatgacta tcatttgact acttgaaaat atatcagtta aaaattagag
      961 aattaaagat gaagtgaagg agtcatctga tgcaataaag gaggaaggaa agaaagatcc
     1021 tgaaacgaca gcacagctag agactagagt caacatccca agaagagtcc caacttcttt
     1081 atacatctaa cttgaactct ttgctttgtt tcattacctg tagtatctct attccagcct
     1141 gttttataaa gatgttgagg ctgaagcagt acgaccctaa gctctcctct ttgttaatgt
     1201 gtgtcatcaa gtctagaggt tcggttcaca atttcacatg atggtgaaaa cacttgcaat
     1261 gaccacatgc ccaaatgagt tctatgattc ctcatccgaa caaatcgtct ttttcattaa
     1321 tgattacatc aatttgttta atgataagtt attaagttat tatgtacttt agccatattc
     1381 atttgttatc ttaatctaat catttaattt acattatgtg ttagccccgc gaagtcgcgg
     1441 gttataaact agtatcaatt atcccaaaac aattcagttt ccatctaagg cgatttcata
     1501 caaatcgaac ccattttttt acatcgtttg aaatcaacca atcacctaca gtaagtttat
     1561 tcgtatatct ttcttttttt tggttttata ttgtattaat cgaattagaa tcaaaaggat
     1621 cattacctat ctttctgaat tgattacttt gttaatgctt ccgggctagg gttcatcgac
     1681 aacatcgacg gatttgatgc tgataaatct atatatcgag atgattgttt ggtttgagta
     1741 atcggttgtc ctcagtaaga ttgaatttct ttacatattt tgttcgatta attggttttg
     1801 cgaaatgaca ttctcacttt gcccacggaa gccgtttttg gtgtttacag gaacttcggg
     1861 tatgggcatc aatccagaaa atgatttttt tcgcaaacaa ggtatgccag aaagaattat
     1921 tgtaatggat tcgttaattg aaaccgatag gggtttggtt atgcgaagtg gttggaatgc
     1981 taattaagta tttatgttag catttttttt tttatgtttt ctttaatacg attatatgca
     2041 tgtgtgaaaa gttatgttgg atggtgatta ttcaatgcac agaagatgtt tgataacatc
     2101 tgagacaaaa agagtatgat ccagtagttc tgatttacta tttaaaggtt tttatattgg
     2161 ctaggtataa agttggaatg gtgtatggct gatgatgttg atgcaagtaa gctcgaatct
     2221 taccctttta ttgatattgc ttctatatta atatagtgtt cattctgttc aatgacaatt
     2281 aacacaaaac tgttgtgata aaattcgtta taggttttat catatttaat aagtagtaat
     2341 tactcagctc tatatatttt ttaaggctaa tggcataata aaaaaatttg gttatatttt
     2401 gtttttgact aattgttact gtgattatta agcaaaaaca tcgaaacaaa gttcaagatc
     2461 aaatattata attgatttat aactctaacc attagtttaa cacttttcta aatatggaca
     2521 aaacttgatc aaagagatgg ttgcagttga aagtagcgat gttgacaggt actcttgaac
     2581 tcaatttgtt gtttatatat gatgcaacct ttatgagtta ataacataga tccgaagcac
     2641 tatgataatc tccactatgg ttcatcatct attggtgtaa agctaagttt tcaaatttga
     2701 aaatgattct gtatatgaat acacatttct ggtcaagcta ataaacattt gcacttctgg
     2761 aagttgtgtc ttctcaggtg acttcaagat cgcactatta tgtttaaatt cttagcttag
     2821 agtttaggaa gttgcattta catgaaccct gaactcaatt aatttgaacc atttataagt
     2881 acatatgttg aaaagtataa atataccagt tttttctttc tgaatttcct acttttgtat
     2941 aattatatgg gcctattttt aaaaaattaa ttatttatag atcatctata tgcatacagg
     3001 ttggttagaa ttaagtacat gtatatgtag tttttcgaat aagtcaaatt atagttcatt
     3061 gtttctcatt catctttaat aataatatca atagaagtgc ttagtttact atagttgttc
     3121 atggatggca atttctacct atttagtgtc ttactatgtt gtcaatagtt atgtttcaaa
     3181 ggcactaagc tgataagcta ttgaggtaaa ttagcattgt agcgactttg gccattcttg
     3241 attccttgaa gtattatttt tctttttttc aagccaattt catgataccc tattggccat
     3301 tcttgcttgc tcttggcctc ttgagtatat tataggtact aaatggaata atggtatact
     3361 ttttcatttt ttttggttgt attcaatttc gttagcattt gatgtatgcg ttagagagac
     3421 aagtgacagt gaatgatgtt ttgtatcagg gaatcattaa ggactatagt gcttcggtgt
     3481 gaaagtttta agcaagcaat tttggggtcg agaattatcg attttttttt tatttttttt
     3541 ttttattaaa acgcgattct gggatgcgtt actaaaatct cgaatgtgaa atcgactcgg
     3601 gaacttcacg gactcggaag gtagcaatgg tggagtcgca agtgacgacc agaactttat
     3661 aatatccgaa acctgaagcg ggttttggat gtccggtgca tgtagtatga cgatgaaaat
     3721 tatagaagtt aattaaatta gttgaaacta ttaagggtgt tttgaatacc cagatttcaa
     3781 atttattttt aactcagatg tatatatgtt tgtttatgac ttttcatttt taatttgtat
     3841 tagaggagca tgaaataaat gtttgatttg gatacagatt tgagttttga tttagggtta
     3901 atgatattga tatagattgt gattttgagt ttg
//
LOCUS       XM_071830119             755 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-processing enzyme
            beta-isozyme-like (LOC139839912), transcript variant X2, mRNA.
ACCESSION   XM_071830119
VERSION     XM_071830119.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..755
                     /gene="LOC139839912"
                     /note="vacuolar-processing enzyme beta-isozyme-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839912"
     CDS             32..601
                     /gene="LOC139839912"
                     /codon_start=1
                     /product="vacuolar-processing enzyme beta-isozyme-like"
                     /protein_id="XP_071686220.1"
                     /db_xref="GeneID:139839912"
                     /translation="MAASHHLLFVLFLTLTLTLLVLQLSEASRSSFFSLRRSKLKGKK
                     AQSFESMGVVDQRDADVYSMWHQYKSLTENSQEKEELLKKIKRITSHRAHLDNSIDII
                     RGKLLQGEIAVRPSGMAIVDDWDCLKTMVRTYETHCGSLTHYGMLHTLFADLCNNNIS
                     KEAMDEAAKATCSSYDMGQWDPAIVGYSA"
     misc_feature    203..547
                     /gene="LOC139839912"
                     /note="C-terminal prodomain of legumain; Region:
                     legumain_C; cd21115"
                     /db_xref="CDD:411051"
     misc_feature    order(206..211,215..223,227..232,239..241,383..385,
                     401..406,410..415,422..424,434..436,452..454,458..460,
                     467..472,476..478)
                     /gene="LOC139839912"
                     /note="catalytic domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:411051"
     polyA_site      755
                     /gene="LOC139839912"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgatcaatt catacactct ttaataatcc catggctgct tctcaccact tgttgttcgt
       61 gttattccta accctaaccc taaccctact tgtgctacaa ctctctgaag cttcccgttc
      121 cagctttttc tctttgcgta ggtcgaaatt gaaaggcaag aaggctcaat cttttgagtc
      181 catgggtgtt gtcgaccaaa gagatgcaga tgtttattca atgtggcatc agtacaagag
      241 tttaaccgaa aattcacaag agaaagagga attactcaag aaaattaaaa gaattacatc
      301 acatagggca catttggata atagtattga tataatccgg ggcaagttat tacaaggaga
      361 aatagcagtt aggcctagtg gaatggccat tgtggacgat tgggactgtc ttaaaaccat
      421 ggtgcgaact tatgagacac attgtggatc attgactcat tatggtatgc ttcatacact
      481 atttgctgac ctgtgcaaca ataatattag caaggaagct atggatgaag ctgcaaaggc
      541 aacatgtagc tcgtacgaca tgggacaatg ggatcctgca attgttggtt atagtgcata
      601 atcgatctag aataatggta ataattaaat taataattaa taagcagcat ggagtacatt
      661 gttcttcgat catgtcccat atatgcatct acctttgtaa tttgttccta cttttgttta
      721 acacagatta aagatcgaat tcgtgttttg attga
//
LOCUS       XR_011757148            3670 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-processing enzyme
            beta-isozyme-like (LOC139839912), transcript variant X3, misc_RNA.
ACCESSION   XR_011757148
VERSION     XR_011757148.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3670
                     /gene="LOC139839912"
                     /note="vacuolar-processing enzyme beta-isozyme-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839912"
     misc_RNA        1..3670
                     /gene="LOC139839912"
                     /product="vacuolar-processing enzyme beta-isozyme-like,
                     transcript variant X3"
                     /db_xref="GeneID:139839912"
ORIGIN      
        1 tcgatcaatt catacactct ttaataatcc catggctgct tctcaccact tgttgttcgt
       61 gttattccta accctaaccc taaccctact tgtgctacaa ctctctgaag cttcccgttc
      121 cagctttttc tctttgcgta ggtcgaaatt gaaaggcaag aaggctcaat cttttgagtc
      181 catgggtgtt gtcgaccaaa gagatgcaga tgtttattca atgtggcatc agtacaagag
      241 tttaaccgaa aattcacaag agaaagagga attactcaag aaaattaaaa gaattacatc
      301 acatagggca catttggata atagtattga tataatccgg ggcaagttat tacaaggaga
      361 aatagcagtt aggcctagtg gaatggccat tgtggacgat tgggactgtc ttaaaaccat
      421 ggtgcgaact tatgagacac attgtggatc attgactcat tatggtatgc ttcatacact
      481 atttgctgac ctgtgcaaca ataatattag caaggaagct atggatgaag ctgcaaaggc
      541 aacatgtagc tcgtacgaca tgggacaatg ggatcctgca attgttggtt atagtgcata
      601 atcgatctag aataatgggc ttcagaagct gccaccatag ccatttgtgc tgctaaaatg
      661 ggtttggtga taccaaccgc cattgttgat gtaactacca cctggcctga ttctctttcc
      721 attgtactcg ctcgcaatta caacacaaaa tgaagatacg tttgtgaact atttgaaaag
      781 tatggagaga taacggattc agtaataatg gaagatccat gaattgctca actgatgggt
      841 tttgtaacca gattgcaaaa gtttcataga aacaatttaa ggattagcta tctgcgacac
      901 aacaagaaag acgatgacta tcatttgact acttgaaaat atatcagtta aaaattagag
      961 aattaaagat gaagtgaagg agtcatctga tgcaataaag gaggaaggaa agaaagatcc
     1021 tgaaacgaca gcacagctag agactagagt caacatccca agaagagtcc caacttcttt
     1081 atacatctaa cttgaactct ttgctttgtt tcattacctg tagtatctct attccagcct
     1141 gttttataaa gatgttgagg ctgaagcagt acgaccctaa gctctcctct ttgttaatgt
     1201 gtgtcatcaa gtctagaggt tcggttcaca atttcacatg atggtgaaaa cacttgcaat
     1261 gaccacatgc ccaaatgagt tctatgattc ctcatccgaa caaatcgtct ttttcattaa
     1321 tgattacatc aatttgttta atgataagtt attaagttat tatgtacttt agccatattc
     1381 atttgttatc ttaatctaat catttaattt acattatgtg ttagccccgc gaagtcgcgg
     1441 gttataaact agtatcaatt atcccaaaac aattcagttt ccatctaagg cgatttcata
     1501 caaatcgaac ccattttttt acatcgtttg aaatcaacca atcacctaca gtaagtttat
     1561 tcgtatatct ttcttttttt tggttttata ttgtattaat cgaattagaa tcaaaaggat
     1621 cattacctat ctttctgaat tgattacttt gttaatgctt ccgggctagg gttcatcgac
     1681 aacatcgacg gatttgatgc tgataaatct atatatcgag atgattgttt ggtttgagta
     1741 atcggttgtc ctcagtaaga ttgaatttct ttacatattt tgttcgatta attggttttg
     1801 cgaaatgaca ttctcacttt gcccacggaa gccgtttttg gtgtttacag gaacttcggg
     1861 tatgggcatc aatccagaaa atgatttttt tcgcaaacaa ggtataaagt tggaatggtg
     1921 tatggctgat gatgttgatg caagtaagct cgaatcttac ccttttattg atattgcttc
     1981 tatattaata tagtgttcat tctgttcaat gacaattaac acaaaactgt tgtgataaaa
     2041 ttcgttatag gttttatcat atttaataag tagtaattac tcagctctat atatttttta
     2101 aggctaatgg cataataaaa aaatttggtt atattttgtt tttgactaat tgttactgtg
     2161 attattaagc aaaaacatcg aaacaaagtt caagatcaaa tattataatt gatttataac
     2221 tctaaccatt agtttaacac ttttctaaat atggacaaaa cttgatcaaa gagatggttg
     2281 cagttgaaag tagcgatgtt gacaggtact cttgaactca atttgttgtt tatatatgat
     2341 gcaaccttta tgagttaata acatagatcc gaagcactat gataatctcc actatggttc
     2401 atcatctatt ggtgtaaagc taagttttca aatttgaaaa tgattctgta tatgaataca
     2461 catttctggt caagctaata aacatttgca cttctggaag ttgtgtcttc tcaggtgact
     2521 tcaagatcgc actattatgt ttaaattctt agcttagagt ttaggaagtt gcatttacat
     2581 gaaccctgaa ctcaattaat ttgaaccatt tataagtaca tatgttgaaa agtataaata
     2641 taccagtttt ttctttctga atttcctact tttgtataat tatatgggcc tatttttaaa
     2701 aaattaatta tttatagatc atctatatgc atacaggttg gttagaatta agtacatgta
     2761 tatgtagttt ttcgaataag tcaaattata gttcattgtt tctcattcat ctttaataat
     2821 aatatcaata gaagtgctta gtttactata gttgttcatg gatggcaatt tctacctatt
     2881 tagtgtctta ctatgttgtc aatagttatg tttcaaaggc actaagctga taagctattg
     2941 aggtaaatta gcattgtagc gactttggcc attcttgatt ccttgaagta ttatttttct
     3001 ttttttcaag ccaatttcat gataccctat tggccattct tgcttgctct tggcctcttg
     3061 agtatattat aggtactaaa tggaataatg gtatactttt tcattttttt tggttgtatt
     3121 caatttcgtt agcatttgat gtatgcgtta gagagacaag tgacagtgaa tgatgttttg
     3181 tatcagggaa tcattaagga ctatagtgct tcggtgtgaa agttttaagc aagcaatttt
     3241 ggggtcgaga attatcgatt ttttttttat tttttttttt tattaaaacg cgattctggg
     3301 atgcgttact aaaatctcga atgtgaaatc gactcgggaa cttcacggac tcggaaggta
     3361 gcaatggtgg agtcgcaagt gacgaccaga actttataat atccgaaacc tgaagcgggt
     3421 tttggatgtc cggtgcatgt agtatgacga tgaaaattat agaagttaat taaattagtt
     3481 gaaactatta agggtgtttt gaatacccag atttcaaatt tatttttaac tcagatgtat
     3541 atatgtttgt ttatgacttt tcatttttaa tttgtattag aggagcatga aataaatgtt
     3601 tgatttggat acagatttga gttttgattt agggttaatg atattgatat agattgtgat
     3661 tttgagtttg
//
LOCUS       XM_071830120            1161 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-processing enzyme
            beta-isozyme-like (LOC139839912), transcript variant X4, mRNA.
ACCESSION   XM_071830120
VERSION     XM_071830120.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1161
                     /gene="LOC139839912"
                     /note="vacuolar-processing enzyme beta-isozyme-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839912"
     CDS             32..601
                     /gene="LOC139839912"
                     /codon_start=1
                     /product="vacuolar-processing enzyme beta-isozyme-like"
                     /protein_id="XP_071686221.1"
                     /db_xref="GeneID:139839912"
                     /translation="MAASHHLLFVLFLTLTLTLLVLQLSEASRSSFFSLRRSKLKGKK
                     AQSFESMGVVDQRDADVYSMWHQYKSLTENSQEKEELLKKIKRITSHRAHLDNSIDII
                     RGKLLQGEIAVRPSGMAIVDDWDCLKTMVRTYETHCGSLTHYGMLHTLFADLCNNNIS
                     KEAMDEAAKATCSSYDMGQWDPAIVGYSA"
     misc_feature    203..547
                     /gene="LOC139839912"
                     /note="C-terminal prodomain of legumain; Region:
                     legumain_C; cd21115"
                     /db_xref="CDD:411051"
     misc_feature    order(206..211,215..223,227..232,239..241,383..385,
                     401..406,410..415,422..424,434..436,452..454,458..460,
                     467..472,476..478)
                     /gene="LOC139839912"
                     /note="catalytic domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:411051"
ORIGIN      
        1 tcgatcaatt catacactct ttaataatcc catggctgct tctcaccact tgttgttcgt
       61 gttattccta accctaaccc taaccctact tgtgctacaa ctctctgaag cttcccgttc
      121 cagctttttc tctttgcgta ggtcgaaatt gaaaggcaag aaggctcaat cttttgagtc
      181 catgggtgtt gtcgaccaaa gagatgcaga tgtttattca atgtggcatc agtacaagag
      241 tttaaccgaa aattcacaag agaaagagga attactcaag aaaattaaaa gaattacatc
      301 acatagggca catttggata atagtattga tataatccgg ggcaagttat tacaaggaga
      361 aatagcagtt aggcctagtg gaatggccat tgtggacgat tgggactgtc ttaaaaccat
      421 ggtgcgaact tatgagacac attgtggatc attgactcat tatggtatgc ttcatacact
      481 atttgctgac ctgtgcaaca ataatattag caaggaagct atggatgaag ctgcaaaggc
      541 aacatgtagc tcgtacgaca tgggacaatg ggatcctgca attgttggtt atagtgcata
      601 atcgatctag aataatgggc ttcagaagct gccaccatag ccatttgtgc tgctaaaatg
      661 ggtttggtga taccaaccgc cattgttgat gtaactacca cctggcctga ttctctttcc
      721 attgtactcg ctcgcaatta caacacaaaa tgaaggtaca cgtttcttta tttttgacac
      781 acctcgctgg aggtggcaaa atggacaagt tagaaaacgg gtctgcatat taacaagata
      841 tactgtattt tcaaaagtta ttaagattat aagtctctgt tctgctatat tttatgtttg
      901 tatgtatgaa taccagatac gtttgtgaac tatttgaaaa gtatggagag ataacggatt
      961 cagtaataat ggaagatcca tgaattgctc aactgatggg ttttgtaacc aggttagtta
     1021 tattgtcttt tttttttttt ttttcctcga gtaatagaat tatgatattt aaaaagataa
     1081 acattgtatc tctactttag atactctact ctttaagaaa agaaagtagt ctgatatatg
     1141 aattagtcac atttacgtaa g
//
LOCUS       XM_071830121            1662 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides trihelix transcription
            factor ASIL1-like (LOC139839913), transcript variant X1, mRNA.
ACCESSION   XM_071830121
VERSION     XM_071830121.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1662
                     /gene="LOC139839913"
                     /note="trihelix transcription factor ASIL1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139839913"
     CDS             357..1541
                     /gene="LOC139839913"
                     /codon_start=1
                     /product="trihelix transcription factor ASIL1-like"
                     /protein_id="XP_071686222.1"
                     /db_xref="GeneID:139839913"
                     /translation="MAETEEDSRYMSNYGVGPKVTVRTPVNHHSQSQQIADSYINDDD
                     DEVEEEDEEQQGVDNGVNGITEHNRDDVENEDEDDDNDGDKDCTPSENYNLQRHPKKR
                     KLKSLSSSFELVPRVPTPTPLPVVPRAVAVVPRVVKRTSFGGRNTLTDWSEHETFALL
                     EEWGSRFVQRGRKSLRSEEWQEVAENVSKVSKMERTDTQCRNRLDTLKKKYKKERALF
                     ESSEITSTKWVYFKKMDLLMSSTPMPMRVPKSAGPTCGVDSGELVSVKPNLYSDSVNV
                     MGKINDSPDETDSDDEDDDLDLLPLTRSKYKRVEDEGIGGSFSLLADSINKFSDIYEK
                     IETQKRKQMMELEKMRMDFLKELELQKKQILERARDEIVKIRQGNYEDNDDNDSAENI
                     SG"
     misc_feature    807..1055
                     /gene="LOC139839913"
                     /note="Myb/SANT-like DNA-binding domain; Region:
                     Myb_DNA-bind_4; pfam13837"
                     /db_xref="CDD:463994"
ORIGIN      
        1 aacacgccaa catgcgaatc aaggttaaaa atggtgttaa gggcattttg atcaatttct
       61 ttaactatta ctagtactct attgtttgcc tatgctgctg aatcgtgacc ggatccgggc
      121 ttggcccatt tcaatctgga cagaccatcc atccgggtgg ggccctgggt cacctgagga
      181 aagaaaatag gattactgca aaaccggctt acatagttac ggtatctttc agttagggtt
      241 tttggtgatc ttgagtcgac gtcaatttca agaatttaaa ggttgccaat ctgtgagctt
      301 ttaggatttg gtagtgatag gagtttgaat tgtgattaat tattaggtgt ggtgtgatgg
      361 ctgaaaccga ggaggattcg aggtatatgt cgaactatgg tgtgggaccg aaagttactg
      421 ttcgtactcc cgttaatcat cattctcagt ctcaacagat tgctgatagt tatattaatg
      481 atgatgatga tgaagtagaa gaagaagatg aagaacaaca gggagttgat aatggggtga
      541 atggtattac tgagcataat agagatgatg ttgagaacga agacgaagac gacgataatg
      601 atggtgataa agattgtaca ccaagtgaga attataattt acaacggcat ccgaaaaaga
      661 ggaagttgaa gagcttgtca tctagttttg aattggtgcc tcgagttcca actccaacac
      721 cactaccagt agtacctcga gcagtagcag tagtacctcg agttgttaag cgtacgtcgt
      781 ttggtgggag aaacacgctt actgattgga gtgaacatga gacgtttgct ttacttgaag
      841 aatggggttc gaggtttgtt caacgtggaa gaaaaagtct tagatctgaa gaatggcaag
      901 aagttgcaga aaatgtttca aaggtatcaa aaatggaaag aactgataca caatgtagaa
      961 accgtttgga tacattgaaa aagaagtata aaaaagagag agctttgttt gaaagtagtg
     1021 aaattacaag tacgaaatgg gtgtatttca agaaaatgga tttgttaatg tcatcaacac
     1081 cgatgccaat gcgagtgcca aaatctgcgg gacctacatg tggagttgat tcgggggagt
     1141 tagtttcagt gaagccgaat ctgtattcag atagtgtgaa tgtaatgggt aaaattaatg
     1201 atagtccaga tgagactgat tcggatgatg aagatgatga tttagatttg ctgccattaa
     1261 caaggtcaaa atacaaaagg gttgaagatg aaggtattgg tggttcgttt agtttgcttg
     1321 cagactctat taacaagttt agtgatatat acgagaagat tgaaactcag aagagaaagc
     1381 aaatgatgga attagagaag atgaggatgg attttcttaa agagttggaa ttacagaaaa
     1441 aacagattct tgaaagagca agagatgaaa ttgtgaaaat cagacaaggg aattatgaag
     1501 ataatgatga taatgattct gcagagaata tcagtgggta aagctatcac cttttgactt
     1561 gatttgtatc taaaaatttg acgttgactt gttgctgttg tataatatat ggattgtaac
     1621 ttgtaacttc ctttaattcc ttgatttgaa ggcaataaat ag
//
LOCUS       XM_071830122            1621 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides trihelix transcription
            factor ASIL1-like (LOC139839913), transcript variant X2, mRNA.
ACCESSION   XM_071830122
VERSION     XM_071830122.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1621
                     /gene="LOC139839913"
                     /note="trihelix transcription factor ASIL1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139839913"
     CDS             316..1500
                     /gene="LOC139839913"
                     /codon_start=1
                     /product="trihelix transcription factor ASIL1-like"
                     /protein_id="XP_071686223.1"
                     /db_xref="GeneID:139839913"
                     /translation="MAETEEDSRYMSNYGVGPKVTVRTPVNHHSQSQQIADSYINDDD
                     DEVEEEDEEQQGVDNGVNGITEHNRDDVENEDEDDDNDGDKDCTPSENYNLQRHPKKR
                     KLKSLSSSFELVPRVPTPTPLPVVPRAVAVVPRVVKRTSFGGRNTLTDWSEHETFALL
                     EEWGSRFVQRGRKSLRSEEWQEVAENVSKVSKMERTDTQCRNRLDTLKKKYKKERALF
                     ESSEITSTKWVYFKKMDLLMSSTPMPMRVPKSAGPTCGVDSGELVSVKPNLYSDSVNV
                     MGKINDSPDETDSDDEDDDLDLLPLTRSKYKRVEDEGIGGSFSLLADSINKFSDIYEK
                     IETQKRKQMMELEKMRMDFLKELELQKKQILERARDEIVKIRQGNYEDNDDNDSAENI
                     SG"
     misc_feature    766..1014
                     /gene="LOC139839913"
                     /note="Myb/SANT-like DNA-binding domain; Region:
                     Myb_DNA-bind_4; pfam13837"
                     /db_xref="CDD:463994"
ORIGIN      
        1 tactctcaat tcattctctc cactttcaca tatcccacaa accctaattc gcacaacaaa
       61 tatgatacgt acacatacat gtgaatttgt ttgatttcta tatttagttc catcgatctg
      121 acatcaacgt tgaaattggg gttccattca ttacagttag ggtttttggt gatcttgagt
      181 cgacgtcaat ttcaagaatt taaaggttta tcatttcgac ttgtaaaaag ggtaaatgag
      241 gttgccaatc tgtgagcttt taggatttgg tagtgatagg agtttgaatt gtgattaatt
      301 attaggtgtg gtgtgatggc tgaaaccgag gaggattcga ggtatatgtc gaactatggt
      361 gtgggaccga aagttactgt tcgtactccc gttaatcatc attctcagtc tcaacagatt
      421 gctgatagtt atattaatga tgatgatgat gaagtagaag aagaagatga agaacaacag
      481 ggagttgata atggggtgaa tggtattact gagcataata gagatgatgt tgagaacgaa
      541 gacgaagacg acgataatga tggtgataaa gattgtacac caagtgagaa ttataattta
      601 caacggcatc cgaaaaagag gaagttgaag agcttgtcat ctagttttga attggtgcct
      661 cgagttccaa ctccaacacc actaccagta gtacctcgag cagtagcagt agtacctcga
      721 gttgttaagc gtacgtcgtt tggtgggaga aacacgctta ctgattggag tgaacatgag
      781 acgtttgctt tacttgaaga atggggttcg aggtttgttc aacgtggaag aaaaagtctt
      841 agatctgaag aatggcaaga agttgcagaa aatgtttcaa aggtatcaaa aatggaaaga
      901 actgatacac aatgtagaaa ccgtttggat acattgaaaa agaagtataa aaaagagaga
      961 gctttgtttg aaagtagtga aattacaagt acgaaatggg tgtatttcaa gaaaatggat
     1021 ttgttaatgt catcaacacc gatgccaatg cgagtgccaa aatctgcggg acctacatgt
     1081 ggagttgatt cgggggagtt agtttcagtg aagccgaatc tgtattcaga tagtgtgaat
     1141 gtaatgggta aaattaatga tagtccagat gagactgatt cggatgatga agatgatgat
     1201 ttagatttgc tgccattaac aaggtcaaaa tacaaaaggg ttgaagatga aggtattggt
     1261 ggttcgttta gtttgcttgc agactctatt aacaagttta gtgatatata cgagaagatt
     1321 gaaactcaga agagaaagca aatgatggaa ttagagaaga tgaggatgga ttttcttaaa
     1381 gagttggaat tacagaaaaa acagattctt gaaagagcaa gagatgaaat tgtgaaaatc
     1441 agacaaggga attatgaaga taatgatgat aatgattctg cagagaatat cagtgggtaa
     1501 agctatcacc ttttgacttg atttgtatct aaaaatttga cgttgacttg ttgctgttgt
     1561 ataatatatg gattgtaact tgtaacttcc tttaattcct tgatttgaag gcaataaata
     1621 g
//
LOCUS       XM_071830123            2613 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear poly(A) polymerase
            4-like (LOC139839915), transcript variant X1, mRNA.
ACCESSION   XM_071830123
VERSION     XM_071830123.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2613
                     /gene="LOC139839915"
                     /note="nuclear poly(A) polymerase 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139839915"
     CDS             264..2186
                     /gene="LOC139839915"
                     /codon_start=1
                     /product="nuclear poly(A) polymerase 4-like isoform X1"
                     /protein_id="XP_071686224.1"
                     /db_xref="GeneID:139839915"
                     /translation="MVGSEGLASPRQHGVTKPLSLAGPSDADLLRTQKLNKFLVDAGL
                     YESEEEAAKREKVLGQIKQIVIDWVKELTRLRGYSDQMVEDANAVIFTFGSYRLGVHG
                     PGADIDTLCVGPSYVNRDEDFFFVLHEILTHIEEVTELQPVPSAHVPVMKFKFDGISI
                     DLLYASISRLVVPADLDISDVSVLYNVDEPTVRSLNGCRVADQILKHVPNVEHFRTTL
                     RCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQFYPNAVPSMLVSRFFRVYTQWRWP
                     NPVMLCPIQEDELGFSIWDPRKNPKDKTHHMPIITPAYPCMNSSYNVSTSTLRVMTDQ
                     FLFGNQICEEIEVNKAQWPTLFEPYLFFKSYKNYLQVDIVAADPDDLRTWKGWVESRL
                     RQLTLMIERDTQGKLQCHPYPHEYIDPSKQCSHSAFFMGLQRKQGEIVEEGQQFDIRG
                     TVDEFRHSVNMYMCWRPGMEIYVSHVRRRQIPLYVFPDGYKRTRVPRVVNHRPVCVTG
                     SADKPNRKRKYGSNMEVDSPQRRPSPSPSSCGSDSPDIFVNGTVSPLQIEPESTVTNV
                     ESGLEKSNVVSGSDSRKSMPGSSSVGDFQSALDEVSEDKIQANAELGMVITSIGAADL
                     DSNKVMRGDDNRMRED"
     misc_feature    303..1337
                     /gene="LOC139839915"
                     /note="Poly(A) polymerase central domain; Region:
                     PAP_central; pfam04928"
                     /db_xref="CDD:461486"
     misc_feature    1344..1739
                     /gene="LOC139839915"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     Region: PAP_RNA-bind; pfam04926"
                     /db_xref="CDD:461484"
     polyA_site      2613
                     /gene="LOC139839915"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gagagagaga gagagagaga gagagagaga acgcgttttc gatcaaagcc cccccaattg
       61 atcttctgaa tttctccaaa ttccaaaaat ctcgttaaat cctctaatcc atcccttcat
      121 atctatcaag tttggatcta agttccgaat ctcactttaa aaaagttact ttcctcgtcg
      181 gttacgttag aattagggtt tccgtacatt attaaaatca aaattagggc ttccgtgtat
      241 ttttatataa attcagggta gtaatggtgg gttctgaggg tttagcttca cctagacagc
      301 atggagttac taaaccattg tctcttgctg gtccttctga tgcagattta ctcagaactc
      361 aaaaattaaa taagtttttg gtagatgctg gactatatga aagtgaagaa gaagcagcca
      421 agagagagaa ggttcttgga caaattaagc agatcgtaat cgactgggtg aaggaactta
      481 ctcgtcttcg agggtactct gatcagatgg tggaggatgc aaatgctgtc atatttactt
      541 ttgggtctta tcgacttggg gttcatggtc ccggggctga cattgacaca ttatgtgttg
      601 ggccatctta tgtgaatcgg gatgaagact tcttctttgt tttgcatgaa atattgacac
      661 atatagagga agttaccgaa cttcaaccgg ttccaagtgc tcatgtaccg gttatgaaat
      721 ttaagtttga tgggatatct attgatcttc tttatgctag catttctcgt ttagtcgtcc
      781 cagctgactt ggacatttct gatgtttccg tgctgtataa tgtcgatgag ccaacagttc
      841 gtagtcttaa tggctgcagg gttgctgatc aaattcttaa acatgttccg aatgttgagc
      901 atttccgtac aacacttcgt tgcttaaagt tttgggctaa aaggcgtggc gtctattcaa
      961 atgtaactgg ttttcttggc ggcgtgaatt gggctattct tgttgcacgg gtttgtcaat
     1021 tttatccaaa tgcagtccct agtatgctgg tgtctcgatt tttcagggtt tatacacagt
     1081 ggagatggcc aaatccagtt atgctttgtc ctattcaaga agacgaactt ggattcagca
     1141 tatgggatcc tcgtaagaat cccaaagaca aaactcacca tatgccgatt ataacacctg
     1201 cttacccatg catgaattct agttataacg tctcaactag cacactacgt gttatgacag
     1261 atcaattttt atttggtaat cagatatgtg aggagataga agttaataaa gcacagtggc
     1321 ccacgctttt tgaaccgtac ttgtttttca agagctacaa gaactacctg caggttgaca
     1381 tagttgctgc tgatccagat gatctacgta cttggaaagg atgggtagag tctcgtctga
     1441 ggcaactgac cttgatgatc gagcgtgaca cacaagggaa gctacaatgt catccttatc
     1501 ctcacgaata catcgatcct tcaaaacagt gttcacacag tgctttcttt atgggattac
     1561 aaagaaaaca aggtgaaata gttgaagaag gtcaacaatt cgatatccgt ggtacagttg
     1621 atgagtttag gcattcagtc aatatgtaca tgtgctggag gcccgggatg gagatctacg
     1681 tatctcatgt tcgtagaagg caaatcccat tatatgtgtt tccagatgga tataaacgta
     1741 cccgtgttcc ccgggtcgtg aatcatcggc ccgtttgtgt tacgggttct gccgataaac
     1801 ctaatagaaa gaggaaatat ggaagtaata tggaggtaga tagtcctcaa agaagaccga
     1861 gtccgagtcc atcgagctgc ggttctgact cacccgacat ctttgttaac gggactgtta
     1921 gcccattgca aatagaaccc gagagtacag tcaccaatgt ggaatcaggg ttagaaaagt
     1981 caaacgttgt ttcgggaagc gatagtcgga agtcaatgcc ggggagttca agtgtgggtg
     2041 atttccagtc tgctttagat gaagtatcgg aggataaaat ccaggcaaat gctgaactcg
     2101 ggatggtaat aacctccata ggcgcagctg acctagactc aaacaaggtt atgaggggtg
     2161 acgacaaccg catgagagaa gattagagct tgtttccaaa tcggaagatg aatcagaagc
     2221 catcggttgt ggtaagtatc atgctgtttg ctggatttta cttgttaatt caccagcaat
     2281 gatcgtttct tttcttgtgc tgcatgcaag catctggagt tcaaagaact ttaaggttga
     2341 acagttcctt gttttgaggc gggatgggga tgaaggcgag aatccacaag gctgcttttg
     2401 atgtataatt tctttttgtg ttcgtgtgtt atgggaatga gaacatgggt gtttaatagc
     2461 ttttgttgaa tccactagat ttgttctttg atgtagtcct cttgtcaggt gttgtgtgta
     2521 attaatgggt aatgatgtgg agtcgtatgt ttaaagtaag tgaccagtac tgaatgtggg
     2581 aatcttgttg gtattgaaac gacactcttt ttt
//
LOCUS       XM_071830124            2534 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear poly(A) polymerase
            4-like (LOC139839915), transcript variant X2, mRNA.
ACCESSION   XM_071830124
VERSION     XM_071830124.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2534
                     /gene="LOC139839915"
                     /note="nuclear poly(A) polymerase 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139839915"
     CDS             264..2186
                     /gene="LOC139839915"
                     /codon_start=1
                     /product="nuclear poly(A) polymerase 4-like isoform X1"
                     /protein_id="XP_071686225.1"
                     /db_xref="GeneID:139839915"
                     /translation="MVGSEGLASPRQHGVTKPLSLAGPSDADLLRTQKLNKFLVDAGL
                     YESEEEAAKREKVLGQIKQIVIDWVKELTRLRGYSDQMVEDANAVIFTFGSYRLGVHG
                     PGADIDTLCVGPSYVNRDEDFFFVLHEILTHIEEVTELQPVPSAHVPVMKFKFDGISI
                     DLLYASISRLVVPADLDISDVSVLYNVDEPTVRSLNGCRVADQILKHVPNVEHFRTTL
                     RCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQFYPNAVPSMLVSRFFRVYTQWRWP
                     NPVMLCPIQEDELGFSIWDPRKNPKDKTHHMPIITPAYPCMNSSYNVSTSTLRVMTDQ
                     FLFGNQICEEIEVNKAQWPTLFEPYLFFKSYKNYLQVDIVAADPDDLRTWKGWVESRL
                     RQLTLMIERDTQGKLQCHPYPHEYIDPSKQCSHSAFFMGLQRKQGEIVEEGQQFDIRG
                     TVDEFRHSVNMYMCWRPGMEIYVSHVRRRQIPLYVFPDGYKRTRVPRVVNHRPVCVTG
                     SADKPNRKRKYGSNMEVDSPQRRPSPSPSSCGSDSPDIFVNGTVSPLQIEPESTVTNV
                     ESGLEKSNVVSGSDSRKSMPGSSSVGDFQSALDEVSEDKIQANAELGMVITSIGAADL
                     DSNKVMRGDDNRMRED"
     misc_feature    303..1337
                     /gene="LOC139839915"
                     /note="Poly(A) polymerase central domain; Region:
                     PAP_central; pfam04928"
                     /db_xref="CDD:461486"
     misc_feature    1344..1739
                     /gene="LOC139839915"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     Region: PAP_RNA-bind; pfam04926"
                     /db_xref="CDD:461484"
     polyA_site      2534
                     /gene="LOC139839915"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gagagagaga gagagagaga gagagagaga acgcgttttc gatcaaagcc cccccaattg
       61 atcttctgaa tttctccaaa ttccaaaaat ctcgttaaat cctctaatcc atcccttcat
      121 atctatcaag tttggatcta agttccgaat ctcactttaa aaaagttact ttcctcgtcg
      181 gttacgttag aattagggtt tccgtacatt attaaaatca aaattagggc ttccgtgtat
      241 ttttatataa attcagggta gtaatggtgg gttctgaggg tttagcttca cctagacagc
      301 atggagttac taaaccattg tctcttgctg gtccttctga tgcagattta ctcagaactc
      361 aaaaattaaa taagtttttg gtagatgctg gactatatga aagtgaagaa gaagcagcca
      421 agagagagaa ggttcttgga caaattaagc agatcgtaat cgactgggtg aaggaactta
      481 ctcgtcttcg agggtactct gatcagatgg tggaggatgc aaatgctgtc atatttactt
      541 ttgggtctta tcgacttggg gttcatggtc ccggggctga cattgacaca ttatgtgttg
      601 ggccatctta tgtgaatcgg gatgaagact tcttctttgt tttgcatgaa atattgacac
      661 atatagagga agttaccgaa cttcaaccgg ttccaagtgc tcatgtaccg gttatgaaat
      721 ttaagtttga tgggatatct attgatcttc tttatgctag catttctcgt ttagtcgtcc
      781 cagctgactt ggacatttct gatgtttccg tgctgtataa tgtcgatgag ccaacagttc
      841 gtagtcttaa tggctgcagg gttgctgatc aaattcttaa acatgttccg aatgttgagc
      901 atttccgtac aacacttcgt tgcttaaagt tttgggctaa aaggcgtggc gtctattcaa
      961 atgtaactgg ttttcttggc ggcgtgaatt gggctattct tgttgcacgg gtttgtcaat
     1021 tttatccaaa tgcagtccct agtatgctgg tgtctcgatt tttcagggtt tatacacagt
     1081 ggagatggcc aaatccagtt atgctttgtc ctattcaaga agacgaactt ggattcagca
     1141 tatgggatcc tcgtaagaat cccaaagaca aaactcacca tatgccgatt ataacacctg
     1201 cttacccatg catgaattct agttataacg tctcaactag cacactacgt gttatgacag
     1261 atcaattttt atttggtaat cagatatgtg aggagataga agttaataaa gcacagtggc
     1321 ccacgctttt tgaaccgtac ttgtttttca agagctacaa gaactacctg caggttgaca
     1381 tagttgctgc tgatccagat gatctacgta cttggaaagg atgggtagag tctcgtctga
     1441 ggcaactgac cttgatgatc gagcgtgaca cacaagggaa gctacaatgt catccttatc
     1501 ctcacgaata catcgatcct tcaaaacagt gttcacacag tgctttcttt atgggattac
     1561 aaagaaaaca aggtgaaata gttgaagaag gtcaacaatt cgatatccgt ggtacagttg
     1621 atgagtttag gcattcagtc aatatgtaca tgtgctggag gcccgggatg gagatctacg
     1681 tatctcatgt tcgtagaagg caaatcccat tatatgtgtt tccagatgga tataaacgta
     1741 cccgtgttcc ccgggtcgtg aatcatcggc ccgtttgtgt tacgggttct gccgataaac
     1801 ctaatagaaa gaggaaatat ggaagtaata tggaggtaga tagtcctcaa agaagaccga
     1861 gtccgagtcc atcgagctgc ggttctgact cacccgacat ctttgttaac gggactgtta
     1921 gcccattgca aatagaaccc gagagtacag tcaccaatgt ggaatcaggg ttagaaaagt
     1981 caaacgttgt ttcgggaagc gatagtcgga agtcaatgcc ggggagttca agtgtgggtg
     2041 atttccagtc tgctttagat gaagtatcgg aggataaaat ccaggcaaat gctgaactcg
     2101 ggatggtaat aacctccata ggcgcagctg acctagactc aaacaaggtt atgaggggtg
     2161 acgacaaccg catgagagaa gattagagct tgtttccaaa tcggaagatg aatcagaagc
     2221 catcggttgt gcatctggag ttcaaagaac tttaaggttg aacagttcct tgttttgagg
     2281 cgggatgggg atgaaggcga gaatccacaa ggctgctttt gatgtataat ttctttttgt
     2341 gttcgtgtgt tatgggaatg agaacatggg tgtttaatag cttttgttga atccactaga
     2401 tttgttcttt gatgtagtcc tcttgtcagg tgttgtgtgt aattaatggg taatgatgtg
     2461 gagtcgtatg tttaaagtaa gtgaccagta ctgaatgtgg gaatcttgtt ggtattgaaa
     2521 cgacactctt tttt
//
LOCUS       XM_071830125            2618 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear poly(A) polymerase
            4-like (LOC139839915), transcript variant X3, mRNA.
ACCESSION   XM_071830125
VERSION     XM_071830125.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2618
                     /gene="LOC139839915"
                     /note="nuclear poly(A) polymerase 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139839915"
     CDS             264..2180
                     /gene="LOC139839915"
                     /codon_start=1
                     /product="nuclear poly(A) polymerase 4-like isoform X2"
                     /protein_id="XP_071686226.1"
                     /db_xref="GeneID:139839915"
                     /translation="MVGSEGLASPRQHGVTKPLSLAGPSDADLLRTQKLNKFLVDAGL
                     YESEEEAAKREKVLGQIKQIVIDWVKELTRLRGYSDQMVEDANAVIFTFGSYRLGVHG
                     PGADIDTLCVGPSYVNRDEDFFFVLHEILTHIEEVTELQPVPSAHVPVMKFKFDGISI
                     DLLYASISRLVVPADLDISDVSVLYNVDEPTVRSLNGCRVADQILKHVPNVEHFRTTL
                     RCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQFYPNAVPSMLVSRFFRVYTQWRWP
                     NPVMLCPIQEDELGFSIWDPRKNPKDKTHHMPIITPAYPCMNSSYNVSTSTLRVMTDQ
                     FLFGNQICEEIEVNKAQWPTLFEPYLFFKSYKNYLQVDIVAADPDDLRTWKGWVESRL
                     RQLTLMIERDTQGKLQCHPYPHEYIDPSKQCSHSAFFMGLQRKQGEIVEEGQQFDIRG
                     TVDEFRHSVNMYMCWRPGMEIYVSHVRRRQIPLYVFPDGYKRTRVPRVVNHRPVCVTG
                     SADKPNRKRKYGSNMEVDSPQRRPSPSPSSCGSDSPDIFVNGTVSPLQIEPESTVTNV
                     ESGLEKSNVVSGSDSRKSMPGSSSVGDFQSALDEVSEDKIQANAELGMVITSIGAADL
                     DSNKVMRLGVTTTA"
     misc_feature    303..1337
                     /gene="LOC139839915"
                     /note="Poly(A) polymerase central domain; Region:
                     PAP_central; pfam04928"
                     /db_xref="CDD:461486"
     misc_feature    1344..1739
                     /gene="LOC139839915"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     Region: PAP_RNA-bind; pfam04926"
                     /db_xref="CDD:461484"
     polyA_site      2618
                     /gene="LOC139839915"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gagagagaga gagagagaga gagagagaga acgcgttttc gatcaaagcc cccccaattg
       61 atcttctgaa tttctccaaa ttccaaaaat ctcgttaaat cctctaatcc atcccttcat
      121 atctatcaag tttggatcta agttccgaat ctcactttaa aaaagttact ttcctcgtcg
      181 gttacgttag aattagggtt tccgtacatt attaaaatca aaattagggc ttccgtgtat
      241 ttttatataa attcagggta gtaatggtgg gttctgaggg tttagcttca cctagacagc
      301 atggagttac taaaccattg tctcttgctg gtccttctga tgcagattta ctcagaactc
      361 aaaaattaaa taagtttttg gtagatgctg gactatatga aagtgaagaa gaagcagcca
      421 agagagagaa ggttcttgga caaattaagc agatcgtaat cgactgggtg aaggaactta
      481 ctcgtcttcg agggtactct gatcagatgg tggaggatgc aaatgctgtc atatttactt
      541 ttgggtctta tcgacttggg gttcatggtc ccggggctga cattgacaca ttatgtgttg
      601 ggccatctta tgtgaatcgg gatgaagact tcttctttgt tttgcatgaa atattgacac
      661 atatagagga agttaccgaa cttcaaccgg ttccaagtgc tcatgtaccg gttatgaaat
      721 ttaagtttga tgggatatct attgatcttc tttatgctag catttctcgt ttagtcgtcc
      781 cagctgactt ggacatttct gatgtttccg tgctgtataa tgtcgatgag ccaacagttc
      841 gtagtcttaa tggctgcagg gttgctgatc aaattcttaa acatgttccg aatgttgagc
      901 atttccgtac aacacttcgt tgcttaaagt tttgggctaa aaggcgtggc gtctattcaa
      961 atgtaactgg ttttcttggc ggcgtgaatt gggctattct tgttgcacgg gtttgtcaat
     1021 tttatccaaa tgcagtccct agtatgctgg tgtctcgatt tttcagggtt tatacacagt
     1081 ggagatggcc aaatccagtt atgctttgtc ctattcaaga agacgaactt ggattcagca
     1141 tatgggatcc tcgtaagaat cccaaagaca aaactcacca tatgccgatt ataacacctg
     1201 cttacccatg catgaattct agttataacg tctcaactag cacactacgt gttatgacag
     1261 atcaattttt atttggtaat cagatatgtg aggagataga agttaataaa gcacagtggc
     1321 ccacgctttt tgaaccgtac ttgtttttca agagctacaa gaactacctg caggttgaca
     1381 tagttgctgc tgatccagat gatctacgta cttggaaagg atgggtagag tctcgtctga
     1441 ggcaactgac cttgatgatc gagcgtgaca cacaagggaa gctacaatgt catccttatc
     1501 ctcacgaata catcgatcct tcaaaacagt gttcacacag tgctttcttt atgggattac
     1561 aaagaaaaca aggtgaaata gttgaagaag gtcaacaatt cgatatccgt ggtacagttg
     1621 atgagtttag gcattcagtc aatatgtaca tgtgctggag gcccgggatg gagatctacg
     1681 tatctcatgt tcgtagaagg caaatcccat tatatgtgtt tccagatgga tataaacgta
     1741 cccgtgttcc ccgggtcgtg aatcatcggc ccgtttgtgt tacgggttct gccgataaac
     1801 ctaatagaaa gaggaaatat ggaagtaata tggaggtaga tagtcctcaa agaagaccga
     1861 gtccgagtcc atcgagctgc ggttctgact cacccgacat ctttgttaac gggactgtta
     1921 gcccattgca aatagaaccc gagagtacag tcaccaatgt ggaatcaggg ttagaaaagt
     1981 caaacgttgt ttcgggaagc gatagtcgga agtcaatgcc ggggagttca agtgtgggtg
     2041 atttccagtc tgctttagat gaagtatcgg aggataaaat ccaggcaaat gctgaactcg
     2101 ggatggtaat aacctccata ggcgcagctg acctagactc aaacaaggtt atgaggttag
     2161 gggtgacgac aaccgcatga gagaagatta gagcttgttt ccaaatcgga agatgaatca
     2221 gaagccatcg gttgtggtaa gtatcatgct gtttgctgga ttttacttgt taattcacca
     2281 gcaatgatcg tttcttttct tgtgctgcat gcaagcatct ggagttcaaa gaactttaag
     2341 gttgaacagt tccttgtttt gaggcgggat ggggatgaag gcgagaatcc acaaggctgc
     2401 ttttgatgta taatttcttt ttgtgttcgt gtgttatggg aatgagaaca tgggtgttta
     2461 atagcttttg ttgaatccac tagatttgtt ctttgatgta gtcctcttgt caggtgttgt
     2521 gtgtaattaa tgggtaatga tgtggagtcg tatgtttaaa gtaagtgacc agtactgaat
     2581 gtgggaatct tgttggtatt gaaacgacac tctttttt
//
LOCUS       XR_011757149            2539 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear poly(A) polymerase
            4-like (LOC139839915), transcript variant X4, misc_RNA.
ACCESSION   XR_011757149
VERSION     XR_011757149.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2539
                     /gene="LOC139839915"
                     /note="nuclear poly(A) polymerase 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139839915"
     misc_RNA        1..2539
                     /gene="LOC139839915"
                     /product="nuclear poly(A) polymerase 4-like, transcript
                     variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839915"
ORIGIN      
        1 gagagagaga gagagagaga gagagagaga acgcgttttc gatcaaagcc cccccaattg
       61 atcttctgaa tttctccaaa ttccaaaaat ctcgttaaat cctctaatcc atcccttcat
      121 atctatcaag tttggatcta agttccgaat ctcactttaa aaaagttact ttcctcgtcg
      181 gttacgttag aattagggtt tccgtacatt attaaaatca aaattagggc ttccgtgtat
      241 ttttatataa attcagggta gtaatggtgg gttctgaggg tttagcttca cctagacagc
      301 atggagttac taaaccattg tctcttgctg gtccttctga tgcagattta ctcagaactc
      361 aaaaattaaa taagtttttg gtagatgctg gactatatga aagtgaagaa gaagcagcca
      421 agagagagaa ggttcttgga caaattaagc agatcgtaat cgactgggtg aaggaactta
      481 ctcgtcttcg agggtactct gatcagatgg tggaggatgc aaatgctgtc atatttactt
      541 ttgggtctta tcgacttggg gttcatggtc ccggggctga cattgacaca ttatgtgttg
      601 ggccatctta tgtgaatcgg gatgaagact tcttctttgt tttgcatgaa atattgacac
      661 atatagagga agttaccgaa cttcaaccgg ttccaagtgc tcatgtaccg gttatgaaat
      721 ttaagtttga tgggatatct attgatcttc tttatgctag catttctcgt ttagtcgtcc
      781 cagctgactt ggacatttct gatgtttccg tgctgtataa tgtcgatgag ccaacagttc
      841 gtagtcttaa tggctgcagg gttgctgatc aaattcttaa acatgttccg aatgttgagc
      901 atttccgtac aacacttcgt tgcttaaagt tttgggctaa aaggcgtggc gtctattcaa
      961 atgtaactgg ttttcttggc ggcgtgaatt gggctattct tgttgcacgg gtttgtcaat
     1021 tttatccaaa tgcagtccct agtatgctgg tgtctcgatt tttcagggtt tatacacagt
     1081 ggagatggcc aaatccagtt atgctttgtc ctattcaaga agacgaactt ggattcagca
     1141 tatgggatcc tcgtaagaat cccaaagaca aaactcacca tatgccgatt ataacacctg
     1201 cttacccatg catgaattct agttataacg tctcaactag cacactacgt gttatgacag
     1261 atcaattttt atttggtaat cagatatgtg aggagataga agttaataaa gcacagtggc
     1321 ccacgctttt tgaaccgtac ttgtttttca agagctacaa gaactacctg caggttgaca
     1381 tagttgctgc tgatccagat gatctacgta cttggaaagg atgggtagag tctcgtctga
     1441 ggcaactgac cttgatgatc gagcgtgaca cacaagggaa gctacaatgt catccttatc
     1501 ctcacgaata catcgatcct tcaaaacagt gttcacacag tgctttcttt atgggattac
     1561 aaagaaaaca aggtgaaata gttgaagaag gtcaacaatt cgatatccgt ggtacagttg
     1621 atgagtttag gcattcagtc aatatgtaca tgtgctggag gcccgggatg gagatctacg
     1681 tatctcatgt tcgtagaagg caaatcccat tatatgtgtt tccagatgga tataaacgta
     1741 cccgtgttcc ccgggtcgtg aatcatcggc ccgtttgtgt tacgggttct gccgataaac
     1801 ctaatagaaa gaggaaatat ggaagtaata tggaggtaga tagtcctcaa agaagaccga
     1861 gtccgagtcc atcgagctgc ggttctgact cacccgacat ctttgttaac gggactgtta
     1921 gcccattgca aatagaaccc gagagtacag tcaccaatgt ggaatcaggg ttagaaaagt
     1981 caaacgttgt ttcgggaagc gatagtcgga agtcaatgcc ggggagttca agtgtgggtg
     2041 atttccagtc tgctttagat gaagtatcgg aggataaaat ccaggcaaat gctgaactcg
     2101 ggatggtaat aacctccata ggcgcagctg acctagactc aaacaaggtt atgaggttag
     2161 gggtgacgac aaccgcatga gagaagatta gagcttgttt ccaaatcgga agatgaatca
     2221 gaagccatcg gttgtgcatc tggagttcaa agaactttaa ggttgaacag ttccttgttt
     2281 tgaggcggga tggggatgaa ggcgagaatc cacaaggctg cttttgatgt ataatttctt
     2341 tttgtgttcg tgtgttatgg gaatgagaac atgggtgttt aatagctttt gttgaatcca
     2401 ctagatttgt tctttgatgt agtcctcttg tcaggtgttg tgtgtaatta atgggtaatg
     2461 atgtggagtc gtatgtttaa agtaagtgac cagtactgaa tgtgggaatc ttgttggtat
     2521 tgaaacgaca ctctttttt
//
LOCUS       XM_071830127             992 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nascent
            polypeptide-associated complex subunit alpha-like protein 2
            (LOC139839916), mRNA.
ACCESSION   XM_071830127
VERSION     XM_071830127.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..992
                     /gene="LOC139839916"
                     /note="nascent polypeptide-associated complex subunit
                     alpha-like protein 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 30 Proteins"
                     /db_xref="GeneID:139839916"
     CDS             104..715
                     /gene="LOC139839916"
                     /codon_start=1
                     /product="nascent polypeptide-associated complex subunit
                     alpha-like protein 2"
                     /protein_id="XP_071686228.1"
                     /db_xref="GeneID:139839916"
                     /translation="MTGAVVEEIETQHQKLEHDDHPTIEDVKDDDDINDEDADSDEED
                     AIQGVSDSSKQSRSEKKSRKAMLKLGMQAVIGVSRVTIKKTKNMMFSISKPDVFKSPN
                     SETYVIFGEAKIDDLSSQLQTQAAQQFKMPDLSSVMAKSDASALTAAAEQEDEDEEVD
                     ETGVQPKDIELVMTQAGVSRPKAVKALKKHDGDIVSAIMELTN"
     misc_feature    311..454
                     /gene="LOC139839916"
                     /note="nascent polypeptide-associated complex (NAC), alpha
                     subunit; Region: NAC_NACA; cd22054"
                     /db_xref="CDD:409233"
     misc_feature    order(323..325,329..361,392..394,413..439,452..454)
                     /gene="LOC139839916"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:409233"
     misc_feature    599..709
                     /gene="LOC139839916"
                     /note="UBA-like domain found in nascent
                     polypeptide-associated complex subunit alpha (NACA) and
                     its homologs mainly found in eukaryotes; Region:
                     UBA_NAC_euk; cd14358"
                     /db_xref="CDD:270541"
     polyA_site      992
                     /gene="LOC139839916"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cccaatcctt caaccggtta atagaagaaa accctaacca taaccaccac tacgagtagc
       61 agctgtgaaa aaaattatca catagctacg tccaccatca acaatgacag gcgccgttgt
      121 cgaagaaatc gaaactcagc accagaagct tgagcatgac gatcacccaa ccattgagga
      181 cgttaaggac gatgatgata ttaacgatga agacgctgat tccgatgaag aagacgccat
      241 ccaaggtgtg agtgacagct ctaagcagag ccggagtgag aagaagagcc gtaaggcgat
      301 gttgaagctc ggtatgcagg cagttattgg cgttagtaga gtcaccatta agaaaacaaa
      361 gaacatgatg ttttctatat caaaacctga tgtcttcaag agcccgaatt ctgaaactta
      421 tgtgatattt ggggaagcaa agattgacga tctaagctca cagttgcaga ctcaagctgc
      481 tcagcagttt aaaatgcctg atttaagttc tgttatggct aaatcagatg cttctgcttt
      541 gactgctgct gctgagcagg aagatgaaga tgaggaggtt gatgaaactg gtgttcagcc
      601 taaagatatt gagttggtta tgacacaagc aggtgtgtcg aggccaaagg cggtcaaggc
      661 tctcaagaag cacgatgggg atatcgtcag tgctatcatg gagctcacta attagattgt
      721 ctgagcattt agcctttttt tttcatacaa acaatgatgg ttttacgttt tgtttcctta
      781 atgttttttt ggatacattt gatatttagc agtttcggta ctatttggtg attcgaggtg
      841 ttaagatatt gtttttcttt ttctttgcta aaacagaaat tactaatatt atcattacac
      901 aacatttaag gtcaactgag ttacaaatga aggtgaaaca gcctgtttgt tacatcaatt
      961 gatatagggc atggtatgca gtttttaatt ta
//
LOCUS       XM_071830128             871 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839917), transcript variant X1, mRNA.
ACCESSION   XM_071830128
VERSION     XM_071830128.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..871
                     /gene="LOC139839917"
                     /note="uncharacterized LOC139839917; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839917"
     CDS             46..744
                     /gene="LOC139839917"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686229.1"
                     /db_xref="GeneID:139839917"
                     /translation="MVPSETKTLHLFEARYLKLLDECLLKKKKLFVHFVLDPIVVSST
                     STEPSFAARYACLVVIDKVEQLDVGALVSIRGLGRVTLVQFAKAEPFLEGIVLPLKDN
                     TPQNETEISSKILELKEAIRGLNSLEIKLKAAKDEPLQTQTANSLEWALKEPSVDCGE
                     GFIPSFAERVSFAAFQNVSGSTHSEMLRLQEEKLKAMDVKETIERLEHSLSFVKNCAS
                     MTAAKLAIQSLNMQ"
     misc_feature    52..>456
                     /gene="LOC139839917"
                     /note="ATP-dependent protease La (LON) substrate-binding
                     domain; Region: LON_substr_bdg; cl47207"
                     /db_xref="CDD:481547"
     polyA_site      871
                     /gene="LOC139839917"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tattaatagt ttataccatt gacccttgtg atggtattgt aggtaatggt tccatcagaa
       61 actaagacac ttcacttatt tgaagcaaga tacctcaagt tgttggatga gtgtttattg
      121 aaaaagaaga aactttttgt gcattttgtg ttggatccca ttgttgttag ttcaacgtcc
      181 acagaaccat cctttgctgc tagatatgct tgtttggtgg ttatagacaa ggttgaacaa
      241 ttagatgttg gggccttagt ttctattaga ggacttggtc gtgtcacgct agttcaattt
      301 gcaaaggcag aacctttctt agaaggtatc gtattaccct tgaaggacaa cacaccacag
      361 aatgaaactg aaataagttc gaaaattctg gaactgaaag aagctattcg tggtttaaat
      421 agcttggaaa taaaattaaa ggctgccaag gatgaaccat tgcagacgca aacagcaaac
      481 tctttagaat gggctctaaa agaaccttct gtagactgtg gagaaggttt cattccatca
      541 tttgctgaac gtgtgtcctt cgctgctttt caaaatgttt caggatcaac acattcagaa
      601 atgttaagat tgcaggaaga aaaactgaaa gcaatggatg ttaaagaaac aatagaacga
      661 ctagaacact ctttgagttt tgtcaaaaac tgtgcctcaa tgactgcagc caagcttgct
      721 attcagtcct tgaacatgca ataatgatta ctgtattgta gatcttcaca ttaaatagtc
      781 tgtttaattc tttaatttat agttgtctat acatatgact acaatttgaa tgaggtttct
      841 tcatacataa aatgtcatat tttcccactc a
//
LOCUS       XM_071830129             832 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839917), transcript variant X2, mRNA.
ACCESSION   XM_071830129
VERSION     XM_071830129.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..832
                     /gene="LOC139839917"
                     /note="uncharacterized LOC139839917; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839917"
     CDS             46..705
                     /gene="LOC139839917"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686230.1"
                     /db_xref="GeneID:139839917"
                     /translation="MVPSETKTLHLFEARYLKLLDECLLKKKKLFVHFVLDPIVVSST
                     STEPSFAARYACLVVIDKVEQLDVGALVSIRGLGRVTLVQFAKDNTPQNETEISSKIL
                     ELKEAIRGLNSLEIKLKAAKDEPLQTQTANSLEWALKEPSVDCGEGFIPSFAERVSFA
                     AFQNVSGSTHSEMLRLQEEKLKAMDVKETIERLEHSLSFVKNCASMTAAKLAIQSLNM
                     Q"
     misc_feature    52..651
                     /gene="LOC139839917"
                     /note="ATP-dependent protease La (LON) substrate-binding
                     domain; Region: LON_substr_bdg; cl47207"
                     /db_xref="CDD:481547"
     polyA_site      832
                     /gene="LOC139839917"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tattaatagt ttataccatt gacccttgtg atggtattgt aggtaatggt tccatcagaa
       61 actaagacac ttcacttatt tgaagcaaga tacctcaagt tgttggatga gtgtttattg
      121 aaaaagaaga aactttttgt gcattttgtg ttggatccca ttgttgttag ttcaacgtcc
      181 acagaaccat cctttgctgc tagatatgct tgtttggtgg ttatagacaa ggttgaacaa
      241 ttagatgttg gggccttagt ttctattaga ggacttggtc gtgtcacgct agttcaattt
      301 gcaaaggaca acacaccaca gaatgaaact gaaataagtt cgaaaattct ggaactgaaa
      361 gaagctattc gtggtttaaa tagcttggaa ataaaattaa aggctgccaa ggatgaacca
      421 ttgcagacgc aaacagcaaa ctctttagaa tgggctctaa aagaaccttc tgtagactgt
      481 ggagaaggtt tcattccatc atttgctgaa cgtgtgtcct tcgctgcttt tcaaaatgtt
      541 tcaggatcaa cacattcaga aatgttaaga ttgcaggaag aaaaactgaa agcaatggat
      601 gttaaagaaa caatagaacg actagaacac tctttgagtt ttgtcaaaaa ctgtgcctca
      661 atgactgcag ccaagcttgc tattcagtcc ttgaacatgc aataatgatt actgtattgt
      721 agatcttcac attaaatagt ctgtttaatt ctttaattta tagttgtcta tacatatgac
      781 tacaatttga atgaggtttc ttcatacata aaatgtcata ttttcccact ca
//
LOCUS       XR_011757150             419 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839918), ncRNA.
ACCESSION   XR_011757150
VERSION     XR_011757150.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..419
                     /gene="LOC139839918"
                     /note="uncharacterized LOC139839918; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839918"
     ncRNA           1..419
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839918"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839918"
ORIGIN      
        1 agttcttgca gagtggaaac caccagtgta tgacaataca aagggtatta ctttggtgac
       61 tgccaccact cgtcgtaatt caccaaataa tttggattct aagattcacc acaataacct
      121 cctgaacaac atactcgcaa agatagaagg gaacaatgca aatgctgatg atgcaattat
      181 gcttgataaa gatggttatg tgtctgaaac aaacgctaca aacatcttca tggtgaaaaa
      241 aggtattgtt atgacaccgc atgctgatta ctgtcttcca ggcatcactc gagcaactgt
      301 catggacctt gtgaagaagg aaaacctggt tttggaagag cgacgtatta gtctatccga
      361 gtttcatact gcagatgagg tctaaacgat caaaatattt tactgaatca ttaatgatg
//
LOCUS       XM_071830130            3413 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable transcriptional
            regulator SLK2 (LOC139839919), transcript variant X1, mRNA.
ACCESSION   XM_071830130
VERSION     XM_071830130.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3413
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3413
                     /gene="LOC139839919"
                     /note="probable transcriptional regulator SLK2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839919"
     CDS             687..3191
                     /gene="LOC139839919"
                     /codon_start=1
                     /product="probable transcriptional regulator SLK2 isoform
                     X1"
                     /protein_id="XP_071686231.1"
                     /db_xref="GeneID:139839919"
                     /translation="MGPSRAGVGMLHSTSTSGIFFQGDVQSQALGNSHLGSFGNSGNM
                     GPGNMRLNMVPVSGDITNSIGASSLVTDANSGLSGGGGPRLQRCASANNESYMRMPAS
                     PLSCTSNNISISGSSVIDGPSGMQPGSNQDLHSQQVGPRQGASTSMPLPPTRVGQFSL
                     PNGSRIPGSFIQDNNNNNNESVSHLQKKPRLDIKQEDIMQQQVLQQLLQRQDSMQLQS
                     PNPQLQSLIQQQRLRQQQQQQQQLLQSLPPVQRAHLLQQQQQQQLQLRQQLQQQSLQP
                     ANAVKRPYDGGVCSRRLMQYLYHQRQRPSDNSISYWRKFVAEYYSPRAKKRWCLSLYD
                     NVGHHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLD
                     LPREYRFPSGIMVLEYGQAVQESIYEQLRVVREGQLKVIFTPDLKILTWEFCARRHEE
                     LLPRRLVAPQVNQLLQVAQKCQATIAESGSDGVSQQDLQTNSNMVVTAGRQLARSLEL
                     QSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDTKAGPIEGLKTFPRQTNSAKSQMQ
                     KMQEMEQITNSIPGVPADQNTLNKLVTLHPVLGNQLNNNNNNQMGNRGASLSGSAQAI
                     ALSNYQNILMRQSSMNSNSQQEASSSFNNTNPNGYQFQGSPNMAVGSGGLQQRPMFQV
                     QQQQQHQSPSHSGSQAMQQHVIQQMLQDMSNGGGSGGGGGGGGGPKPSFSGQSGASGS
                     MSMGREGLRYGLSSTGTSPRPPAVPTRSNSFKSSAAGGATVNLGGGGGNQKAATSDLP
                     SHLCDDIVQDIASEFTGNGFFDNDELEEGMGFGWKA"
     misc_feature    1560..2342
                     /gene="LOC139839919"
                     /note="LIM-domain binding protein; Region: LIM_bind;
                     pfam01803"
                     /db_xref="CDD:426444"
ORIGIN      
        1 tattttattt cagaaatata tttttatatt ttaataataa tagctaagag tcgattgatg
       61 tttgatttaa tttaattttt gattaaatta agtatatgat caatgccaga aaaggtagat
      121 ctttgaatct gagctggtat tagttgttta gttttgctat taaatagttt agtagctttt
      181 tatggaagca atattgttat acagatttga tttgctgttg catttttttt atttttcttt
      241 ttcaaaatga aagtgatgaa gttaacttgt tatactccgt attttagtag tagattttta
      301 gtaaaattcg ttaatatgcg agtatttgtt acctgtttag atatataata gtttttgtat
      361 tggatgaaaa tgaaaattag ggtttctgta gtaactagtg ttgctctgat atcattataa
      421 ttatgttaga ttactatata tctgtggata tgtatacatg tacatgataa ttggtgtttc
      481 tagtattgat ttgttctgtt aatttttatt gatttcaggt atttattaaa aactgctgaa
      541 tctaggttaa aatttactac taggaacact gaggtgtttg aacagatttg atttctattg
      601 ttgttagtaa ctggtatcaa ggatagacta aaacactggc gctagataat tacttagatt
      661 cgagccagca agcggctcta tcgcgaatgg gaccttctcg agcgggtgtc gggatgttac
      721 attcaacatc aacttctggg atttttttcc aaggagatgt gcagtctcaa gctttaggta
      781 attcacattt gggatctttt gggaactctg gaaatatggg acctggaaat atgcgtttga
      841 acatggtacc tgtgtcaggg gatataacta atagtatcgg tgcaagttca ttggttactg
      901 atgctaattc agggctttca ggaggtggtg gtccgcgtct tcaacgatgt gctagtgcta
      961 ataatgaatc gtatatgcga atgcctgcat cgcctttgtc atgtacgtct aataatataa
     1021 gcatatctgg atcttctgtt atagatggcc cttcaggaat gcagcctggg tccaatcaag
     1081 atctacattc tcagcaagtg ggcccacgtc aaggagcttc taccagcatg ccattgcctc
     1141 ctacgcgtgt tgggcaattt tcactcccta atgggtcgag aatccctgga tcatttattc
     1201 aagataataa taataataat aatgaaagtg tatcccactt gcaaaagaaa cctcgattag
     1261 atatcaagca ggaagatatt atgcagcaac aggttttaca acagttattg caaagacaag
     1321 actcgatgca gttacaaagc ccaaatcctc aattacaaag cttaattcag caacagagac
     1381 taaggcaaca gcagcaacaa caacagcagt tgctgcagtc attgccacct gttcaacgag
     1441 cacatttgct tcagcagcag caacaacaac agctgcagtt gaggcaacaa ttacaacaac
     1501 agagcttgca acctgcaaat gcagtgaaac gtccttatga tggtggtgta tgctcacgaa
     1561 gactgatgca atacttgtat catcagaggc aaaggccatc tgataacagt atttcctatt
     1621 ggaggaagtt tgtggcagag tattattctc ctcgtgctaa gaaaaggtgg tgcctgtctt
     1681 tgtatgataa tgttggccat cactcgttgg gtgtattccc gcaggcagca atggatgcat
     1741 ggcagtgtga tatttgcggg tcaaaatctg gaagaggctt tgaggcaact tttgaagtac
     1801 ttccaagact taatgaaata aagtttggta gtggtgttat cgatgagctt ttatttctgg
     1861 acttgcctcg ggaatataga tttccttctg gaatcatggt actagagtat gggcaagctg
     1921 ttcaagaaag tatatacgag caacttcgcg tggttcgtga gggtcaactt aaagttattt
     1981 tcacacctga tttaaagata ttaacctggg aattctgtgc acgacgccat gaagagcttc
     2041 ttccccgtag gttggttgca cctcaggtga atcagctgtt acaagtggca caaaaatgtc
     2101 aagccacaat agctgaaagt ggttctgacg gggtctccca gcaagatttg cagaccaata
     2161 gcaacatggt tgtgaccgcc ggccgacagc ttgcaaggag cttagagtta caatcattga
     2221 atgacttggg tttttccaaa agatatgtta gatgcttaca gatatctgaa gttgtcaata
     2281 gtatgaaaga cttgatggac ttctgccgag acactaaagc tggccctata gagggtttaa
     2341 aaacgtttcc tcgacaaacg aactcagcca agtcacaaat gcagaagatg caagaaatgg
     2401 aacagataac taacagtatc ccgggggtcc cagcagacca gaacacactc aataaattag
     2461 taacactgca tcccgtactt ggcaatcaat tgaacaacaa caacaataat caaatgggta
     2521 accgaggagc ttcactaagt ggttcagctc aggctattgc actttcaaac taccagaaca
     2581 ttctgatgag acaaagttcc atgaactcaa attcacaaca ggaagcctcg tcatcgttta
     2641 ataacacgaa tcctaacgga taccaatttc aaggctctcc caatatggcg gttggcagtg
     2701 gcggtctcca acagaggcct atgtttcagg ttcaacaaca acaacagcat caatcacctt
     2761 ctcacagtgg cagccaggcc atgcaacaac acgtgattca gcaaatgctt caagacatga
     2821 gtaatggtgg cggaagcgga ggtggtggtg gtggtggtgg aggaccaaag ccgtcgtttt
     2881 ccggtcagag tggtgctagt gggagtatga gtatgggtag ggaagggttg agatacgggc
     2941 tttcgtcaac ggggacatca ccccgcccac ctgctgttcc aacaagaagt aacagtttca
     3001 aatcatctgc tgcaggtggt gcgaccgtta atttaggagg tggtggtggt aatcagaagg
     3061 cggccaccag tgatctgccg tcacatttat gtgatgatat agttcaggat attgcgagtg
     3121 agtttaccgg gaatgggttt ttcgacaatg atgaattgga ggaaggaatg ggttttggtt
     3181 ggaaggcata aacttaatac ttatgtacag ttgtattgta ttctgtatta ttatacacgt
     3241 tgatttttat ttctactttt tttttttttt tttttttttt tttgttatgg agtttggtag
     3301 ttatctaatt aatacattac taattctgat tctaatgtga tcaccagaat agtttcagag
     3361 aatgggtgtg tttggaagac atatattagg agctcattgg agcttaaaat agt
//
LOCUS       XM_071830131            3095 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable transcriptional
            regulator SLK2 (LOC139839919), transcript variant X2, mRNA.
ACCESSION   XM_071830131
VERSION     XM_071830131.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3095
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3095
                     /gene="LOC139839919"
                     /note="probable transcriptional regulator SLK2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839919"
     CDS             369..2873
                     /gene="LOC139839919"
                     /codon_start=1
                     /product="probable transcriptional regulator SLK2 isoform
                     X1"
                     /protein_id="XP_071686232.1"
                     /db_xref="GeneID:139839919"
                     /translation="MGPSRAGVGMLHSTSTSGIFFQGDVQSQALGNSHLGSFGNSGNM
                     GPGNMRLNMVPVSGDITNSIGASSLVTDANSGLSGGGGPRLQRCASANNESYMRMPAS
                     PLSCTSNNISISGSSVIDGPSGMQPGSNQDLHSQQVGPRQGASTSMPLPPTRVGQFSL
                     PNGSRIPGSFIQDNNNNNNESVSHLQKKPRLDIKQEDIMQQQVLQQLLQRQDSMQLQS
                     PNPQLQSLIQQQRLRQQQQQQQQLLQSLPPVQRAHLLQQQQQQQLQLRQQLQQQSLQP
                     ANAVKRPYDGGVCSRRLMQYLYHQRQRPSDNSISYWRKFVAEYYSPRAKKRWCLSLYD
                     NVGHHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLD
                     LPREYRFPSGIMVLEYGQAVQESIYEQLRVVREGQLKVIFTPDLKILTWEFCARRHEE
                     LLPRRLVAPQVNQLLQVAQKCQATIAESGSDGVSQQDLQTNSNMVVTAGRQLARSLEL
                     QSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDTKAGPIEGLKTFPRQTNSAKSQMQ
                     KMQEMEQITNSIPGVPADQNTLNKLVTLHPVLGNQLNNNNNNQMGNRGASLSGSAQAI
                     ALSNYQNILMRQSSMNSNSQQEASSSFNNTNPNGYQFQGSPNMAVGSGGLQQRPMFQV
                     QQQQQHQSPSHSGSQAMQQHVIQQMLQDMSNGGGSGGGGGGGGGPKPSFSGQSGASGS
                     MSMGREGLRYGLSSTGTSPRPPAVPTRSNSFKSSAAGGATVNLGGGGGNQKAATSDLP
                     SHLCDDIVQDIASEFTGNGFFDNDELEEGMGFGWKA"
     misc_feature    1242..2024
                     /gene="LOC139839919"
                     /note="LIM-domain binding protein; Region: LIM_bind;
                     pfam01803"
                     /db_xref="CDD:426444"
ORIGIN      
        1 gaaccatcca tcaatcctac cagatctaga cacgtgtcat catcacccac acgcgtcccc
       61 acaatttacc gtcaattgcc agtcacccta gggctatcca ccggcacttc ctgtcaccct
      121 tctaatctcc gattcgcgct agatacataa actccgatcg aacaccccaa tttctcttct
      181 tcagaattac aacttcgttg gtatttatta aaaactgctg aatctaggtt aaaatttact
      241 actaggaaca ctgaggtgtt tgaacagatt tgatttctat tgttgttagt aactggtatc
      301 aaggatagac taaaacactg gcgctagata attacttaga ttcgagccag caagcggctc
      361 tatcgcgaat gggaccttct cgagcgggtg tcgggatgtt acattcaaca tcaacttctg
      421 ggattttttt ccaaggagat gtgcagtctc aagctttagg taattcacat ttgggatctt
      481 ttgggaactc tggaaatatg ggacctggaa atatgcgttt gaacatggta cctgtgtcag
      541 gggatataac taatagtatc ggtgcaagtt cattggttac tgatgctaat tcagggcttt
      601 caggaggtgg tggtccgcgt cttcaacgat gtgctagtgc taataatgaa tcgtatatgc
      661 gaatgcctgc atcgcctttg tcatgtacgt ctaataatat aagcatatct ggatcttctg
      721 ttatagatgg cccttcagga atgcagcctg ggtccaatca agatctacat tctcagcaag
      781 tgggcccacg tcaaggagct tctaccagca tgccattgcc tcctacgcgt gttgggcaat
      841 tttcactccc taatgggtcg agaatccctg gatcatttat tcaagataat aataataata
      901 ataatgaaag tgtatcccac ttgcaaaaga aacctcgatt agatatcaag caggaagata
      961 ttatgcagca acaggtttta caacagttat tgcaaagaca agactcgatg cagttacaaa
     1021 gcccaaatcc tcaattacaa agcttaattc agcaacagag actaaggcaa cagcagcaac
     1081 aacaacagca gttgctgcag tcattgccac ctgttcaacg agcacatttg cttcagcagc
     1141 agcaacaaca acagctgcag ttgaggcaac aattacaaca acagagcttg caacctgcaa
     1201 atgcagtgaa acgtccttat gatggtggtg tatgctcacg aagactgatg caatacttgt
     1261 atcatcagag gcaaaggcca tctgataaca gtatttccta ttggaggaag tttgtggcag
     1321 agtattattc tcctcgtgct aagaaaaggt ggtgcctgtc tttgtatgat aatgttggcc
     1381 atcactcgtt gggtgtattc ccgcaggcag caatggatgc atggcagtgt gatatttgcg
     1441 ggtcaaaatc tggaagaggc tttgaggcaa cttttgaagt acttccaaga cttaatgaaa
     1501 taaagtttgg tagtggtgtt atcgatgagc ttttatttct ggacttgcct cgggaatata
     1561 gatttccttc tggaatcatg gtactagagt atgggcaagc tgttcaagaa agtatatacg
     1621 agcaacttcg cgtggttcgt gagggtcaac ttaaagttat tttcacacct gatttaaaga
     1681 tattaacctg ggaattctgt gcacgacgcc atgaagagct tcttccccgt aggttggttg
     1741 cacctcaggt gaatcagctg ttacaagtgg cacaaaaatg tcaagccaca atagctgaaa
     1801 gtggttctga cggggtctcc cagcaagatt tgcagaccaa tagcaacatg gttgtgaccg
     1861 ccggccgaca gcttgcaagg agcttagagt tacaatcatt gaatgacttg ggtttttcca
     1921 aaagatatgt tagatgctta cagatatctg aagttgtcaa tagtatgaaa gacttgatgg
     1981 acttctgccg agacactaaa gctggcccta tagagggttt aaaaacgttt cctcgacaaa
     2041 cgaactcagc caagtcacaa atgcagaaga tgcaagaaat ggaacagata actaacagta
     2101 tcccgggggt cccagcagac cagaacacac tcaataaatt agtaacactg catcccgtac
     2161 ttggcaatca attgaacaac aacaacaata atcaaatggg taaccgagga gcttcactaa
     2221 gtggttcagc tcaggctatt gcactttcaa actaccagaa cattctgatg agacaaagtt
     2281 ccatgaactc aaattcacaa caggaagcct cgtcatcgtt taataacacg aatcctaacg
     2341 gataccaatt tcaaggctct cccaatatgg cggttggcag tggcggtctc caacagaggc
     2401 ctatgtttca ggttcaacaa caacaacagc atcaatcacc ttctcacagt ggcagccagg
     2461 ccatgcaaca acacgtgatt cagcaaatgc ttcaagacat gagtaatggt ggcggaagcg
     2521 gaggtggtgg tggtggtggt ggaggaccaa agccgtcgtt ttccggtcag agtggtgcta
     2581 gtgggagtat gagtatgggt agggaagggt tgagatacgg gctttcgtca acggggacat
     2641 caccccgccc acctgctgtt ccaacaagaa gtaacagttt caaatcatct gctgcaggtg
     2701 gtgcgaccgt taatttagga ggtggtggtg gtaatcagaa ggcggccacc agtgatctgc
     2761 cgtcacattt atgtgatgat atagttcagg atattgcgag tgagtttacc gggaatgggt
     2821 ttttcgacaa tgatgaattg gaggaaggaa tgggttttgg ttggaaggca taaacttaat
     2881 acttatgtac agttgtattg tattctgtat tattatacac gttgattttt atttctactt
     2941 tttttttttt tttttttttt tttttgttat ggagtttggt agttatctaa ttaatacatt
     3001 actaattctg attctaatgt gatcaccaga atagtttcag agaatgggtg tgtttggaag
     3061 acatatatta ggagctcatt ggagcttaaa atagt
//
LOCUS       XM_071830132            3015 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable transcriptional
            regulator SLK2 (LOC139839919), transcript variant X3, mRNA.
ACCESSION   XM_071830132
VERSION     XM_071830132.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3015
                     /gene="LOC139839919"
                     /note="probable transcriptional regulator SLK2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839919"
     CDS             289..2793
                     /gene="LOC139839919"
                     /codon_start=1
                     /product="probable transcriptional regulator SLK2 isoform
                     X1"
                     /protein_id="XP_071686233.1"
                     /db_xref="GeneID:139839919"
                     /translation="MGPSRAGVGMLHSTSTSGIFFQGDVQSQALGNSHLGSFGNSGNM
                     GPGNMRLNMVPVSGDITNSIGASSLVTDANSGLSGGGGPRLQRCASANNESYMRMPAS
                     PLSCTSNNISISGSSVIDGPSGMQPGSNQDLHSQQVGPRQGASTSMPLPPTRVGQFSL
                     PNGSRIPGSFIQDNNNNNNESVSHLQKKPRLDIKQEDIMQQQVLQQLLQRQDSMQLQS
                     PNPQLQSLIQQQRLRQQQQQQQQLLQSLPPVQRAHLLQQQQQQQLQLRQQLQQQSLQP
                     ANAVKRPYDGGVCSRRLMQYLYHQRQRPSDNSISYWRKFVAEYYSPRAKKRWCLSLYD
                     NVGHHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLD
                     LPREYRFPSGIMVLEYGQAVQESIYEQLRVVREGQLKVIFTPDLKILTWEFCARRHEE
                     LLPRRLVAPQVNQLLQVAQKCQATIAESGSDGVSQQDLQTNSNMVVTAGRQLARSLEL
                     QSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDTKAGPIEGLKTFPRQTNSAKSQMQ
                     KMQEMEQITNSIPGVPADQNTLNKLVTLHPVLGNQLNNNNNNQMGNRGASLSGSAQAI
                     ALSNYQNILMRQSSMNSNSQQEASSSFNNTNPNGYQFQGSPNMAVGSGGLQQRPMFQV
                     QQQQQHQSPSHSGSQAMQQHVIQQMLQDMSNGGGSGGGGGGGGGPKPSFSGQSGASGS
                     MSMGREGLRYGLSSTGTSPRPPAVPTRSNSFKSSAAGGATVNLGGGGGNQKAATSDLP
                     SHLCDDIVQDIASEFTGNGFFDNDELEEGMGFGWKA"
     misc_feature    1162..1944
                     /gene="LOC139839919"
                     /note="LIM-domain binding protein; Region: LIM_bind;
                     pfam01803"
                     /db_xref="CDD:426444"
ORIGIN      
        1 atattttatt ttatttcaga aatatatttt tatattttaa taataatagc taagagtcga
       61 ttgatgtttg atttaattta atttttgatt aaattaagta tatgatcaat gccagaaaag
      121 gtatttatta aaaactgctg aatctaggtt aaaatttact actaggaaca ctgaggtgtt
      181 tgaacagatt tgatttctat tgttgttagt aactggtatc aaggatagac taaaacactg
      241 gcgctagata attacttaga ttcgagccag caagcggctc tatcgcgaat gggaccttct
      301 cgagcgggtg tcgggatgtt acattcaaca tcaacttctg ggattttttt ccaaggagat
      361 gtgcagtctc aagctttagg taattcacat ttgggatctt ttgggaactc tggaaatatg
      421 ggacctggaa atatgcgttt gaacatggta cctgtgtcag gggatataac taatagtatc
      481 ggtgcaagtt cattggttac tgatgctaat tcagggcttt caggaggtgg tggtccgcgt
      541 cttcaacgat gtgctagtgc taataatgaa tcgtatatgc gaatgcctgc atcgcctttg
      601 tcatgtacgt ctaataatat aagcatatct ggatcttctg ttatagatgg cccttcagga
      661 atgcagcctg ggtccaatca agatctacat tctcagcaag tgggcccacg tcaaggagct
      721 tctaccagca tgccattgcc tcctacgcgt gttgggcaat tttcactccc taatgggtcg
      781 agaatccctg gatcatttat tcaagataat aataataata ataatgaaag tgtatcccac
      841 ttgcaaaaga aacctcgatt agatatcaag caggaagata ttatgcagca acaggtttta
      901 caacagttat tgcaaagaca agactcgatg cagttacaaa gcccaaatcc tcaattacaa
      961 agcttaattc agcaacagag actaaggcaa cagcagcaac aacaacagca gttgctgcag
     1021 tcattgccac ctgttcaacg agcacatttg cttcagcagc agcaacaaca acagctgcag
     1081 ttgaggcaac aattacaaca acagagcttg caacctgcaa atgcagtgaa acgtccttat
     1141 gatggtggtg tatgctcacg aagactgatg caatacttgt atcatcagag gcaaaggcca
     1201 tctgataaca gtatttccta ttggaggaag tttgtggcag agtattattc tcctcgtgct
     1261 aagaaaaggt ggtgcctgtc tttgtatgat aatgttggcc atcactcgtt gggtgtattc
     1321 ccgcaggcag caatggatgc atggcagtgt gatatttgcg ggtcaaaatc tggaagaggc
     1381 tttgaggcaa cttttgaagt acttccaaga cttaatgaaa taaagtttgg tagtggtgtt
     1441 atcgatgagc ttttatttct ggacttgcct cgggaatata gatttccttc tggaatcatg
     1501 gtactagagt atgggcaagc tgttcaagaa agtatatacg agcaacttcg cgtggttcgt
     1561 gagggtcaac ttaaagttat tttcacacct gatttaaaga tattaacctg ggaattctgt
     1621 gcacgacgcc atgaagagct tcttccccgt aggttggttg cacctcaggt gaatcagctg
     1681 ttacaagtgg cacaaaaatg tcaagccaca atagctgaaa gtggttctga cggggtctcc
     1741 cagcaagatt tgcagaccaa tagcaacatg gttgtgaccg ccggccgaca gcttgcaagg
     1801 agcttagagt tacaatcatt gaatgacttg ggtttttcca aaagatatgt tagatgctta
     1861 cagatatctg aagttgtcaa tagtatgaaa gacttgatgg acttctgccg agacactaaa
     1921 gctggcccta tagagggttt aaaaacgttt cctcgacaaa cgaactcagc caagtcacaa
     1981 atgcagaaga tgcaagaaat ggaacagata actaacagta tcccgggggt cccagcagac
     2041 cagaacacac tcaataaatt agtaacactg catcccgtac ttggcaatca attgaacaac
     2101 aacaacaata atcaaatggg taaccgagga gcttcactaa gtggttcagc tcaggctatt
     2161 gcactttcaa actaccagaa cattctgatg agacaaagtt ccatgaactc aaattcacaa
     2221 caggaagcct cgtcatcgtt taataacacg aatcctaacg gataccaatt tcaaggctct
     2281 cccaatatgg cggttggcag tggcggtctc caacagaggc ctatgtttca ggttcaacaa
     2341 caacaacagc atcaatcacc ttctcacagt ggcagccagg ccatgcaaca acacgtgatt
     2401 cagcaaatgc ttcaagacat gagtaatggt ggcggaagcg gaggtggtgg tggtggtggt
     2461 ggaggaccaa agccgtcgtt ttccggtcag agtggtgcta gtgggagtat gagtatgggt
     2521 agggaagggt tgagatacgg gctttcgtca acggggacat caccccgccc acctgctgtt
     2581 ccaacaagaa gtaacagttt caaatcatct gctgcaggtg gtgcgaccgt taatttagga
     2641 ggtggtggtg gtaatcagaa ggcggccacc agtgatctgc cgtcacattt atgtgatgat
     2701 atagttcagg atattgcgag tgagtttacc gggaatgggt ttttcgacaa tgatgaattg
     2761 gaggaaggaa tgggttttgg ttggaaggca taaacttaat acttatgtac agttgtattg
     2821 tattctgtat tattatacac gttgattttt atttctactt tttttttttt tttttttttt
     2881 tttttgttat ggagtttggt agttatctaa ttaatacatt actaattctg attctaatgt
     2941 gatcaccaga atagtttcag agaatgggtg tgtttggaag acatatatta ggagctcatt
     3001 ggagcttaaa atagt
//
LOCUS       XM_071830133            3268 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable transcriptional
            regulator SLK2 (LOC139839919), transcript variant X4, mRNA.
ACCESSION   XM_071830133
VERSION     XM_071830133.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3268
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3268
                     /gene="LOC139839919"
                     /note="probable transcriptional regulator SLK2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139839919"
     CDS             686..3046
                     /gene="LOC139839919"
                     /codon_start=1
                     /product="probable transcriptional regulator SLK2 isoform
                     X2"
                     /protein_id="XP_071686234.1"
                     /db_xref="GeneID:139839919"
                     /translation="MGPSRAGVGMLHSTSTSGIFFQGDVQSQALGGGGPRLQRCASAN
                     NESYMRMPASPLSCTSNNISISGSSVIDGPSGMQPGSNQDLHSQQVGPRQGASTSMPL
                     PPTRVGQFSLPNGSRIPGSFIQDNNNNNNESVSHLQKKPRLDIKQEDIMQQQVLQQLL
                     QRQDSMQLQSPNPQLQSLIQQQRLRQQQQQQQQLLQSLPPVQRAHLLQQQQQQQLQLR
                     QQLQQQSLQPANAVKRPYDGGVCSRRLMQYLYHQRQRPSDNSISYWRKFVAEYYSPRA
                     KKRWCLSLYDNVGHHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGS
                     GVIDELLFLDLPREYRFPSGIMVLEYGQAVQESIYEQLRVVREGQLKVIFTPDLKILT
                     WEFCARRHEELLPRRLVAPQVNQLLQVAQKCQATIAESGSDGVSQQDLQTNSNMVVTA
                     GRQLARSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDTKAGPIEGLKTFPR
                     QTNSAKSQMQKMQEMEQITNSIPGVPADQNTLNKLVTLHPVLGNQLNNNNNNQMGNRG
                     ASLSGSAQAIALSNYQNILMRQSSMNSNSQQEASSSFNNTNPNGYQFQGSPNMAVGSG
                     GLQQRPMFQVQQQQQHQSPSHSGSQAMQQHVIQQMLQDMSNGGGSGGGGGGGGGPKPS
                     FSGQSGASGSMSMGREGLRYGLSSTGTSPRPPAVPTRSNSFKSSAAGGATVNLGGGGG
                     NQKAATSDLPSHLCDDIVQDIASEFTGNGFFDNDELEEGMGFGWKA"
     misc_feature    1415..2197
                     /gene="LOC139839919"
                     /note="LIM-domain binding protein; Region: LIM_bind;
                     pfam01803"
                     /db_xref="CDD:426444"
ORIGIN      
        1 attttatttc agaaatatat ttttatattt taataataat agctaagagt cgattgatgt
       61 ttgatttaat ttaatttttg attaaattaa gtatatgatc aatgccagaa aaggtagatc
      121 tttgaatctg agctggtatt agttgtttag ttttgctatt aaatagttta gtagcttttt
      181 atggaagcaa tattgttata cagatttgat ttgctgttgc atttttttta tttttctttt
      241 tcaaaatgaa agtgatgaag ttaacttgtt atactccgta ttttagtagt agatttttag
      301 taaaattcgt taatatgcga gtatttgtta cctgtttaga tatataatag tttttgtatt
      361 ggatgaaaat gaaaattagg gtttctgtag taactagtgt tgctctgata tcattataat
      421 tatgttagat tactatatat ctgtggatat gtatacatgt acatgataat tggtgtttct
      481 agtattgatt tgttctgtta atttttattg atttcaggta tttattaaaa actgctgaat
      541 ctaggttaaa atttactact aggaacactg aggtgtttga acagatttga tttctattgt
      601 tgttagtaac tggtatcaag gatagactaa aacactggcg ctagataatt acttagattc
      661 gagccagcaa gcggctctat cgcgaatggg accttctcga gcgggtgtcg ggatgttaca
      721 ttcaacatca acttctggga tttttttcca aggagatgtg cagtctcaag ctttaggagg
      781 tggtggtccg cgtcttcaac gatgtgctag tgctaataat gaatcgtata tgcgaatgcc
      841 tgcatcgcct ttgtcatgta cgtctaataa tataagcata tctggatctt ctgttataga
      901 tggcccttca ggaatgcagc ctgggtccaa tcaagatcta cattctcagc aagtgggccc
      961 acgtcaagga gcttctacca gcatgccatt gcctcctacg cgtgttgggc aattttcact
     1021 ccctaatggg tcgagaatcc ctggatcatt tattcaagat aataataata ataataatga
     1081 aagtgtatcc cacttgcaaa agaaacctcg attagatatc aagcaggaag atattatgca
     1141 gcaacaggtt ttacaacagt tattgcaaag acaagactcg atgcagttac aaagcccaaa
     1201 tcctcaatta caaagcttaa ttcagcaaca gagactaagg caacagcagc aacaacaaca
     1261 gcagttgctg cagtcattgc cacctgttca acgagcacat ttgcttcagc agcagcaaca
     1321 acaacagctg cagttgaggc aacaattaca acaacagagc ttgcaacctg caaatgcagt
     1381 gaaacgtcct tatgatggtg gtgtatgctc acgaagactg atgcaatact tgtatcatca
     1441 gaggcaaagg ccatctgata acagtatttc ctattggagg aagtttgtgg cagagtatta
     1501 ttctcctcgt gctaagaaaa ggtggtgcct gtctttgtat gataatgttg gccatcactc
     1561 gttgggtgta ttcccgcagg cagcaatgga tgcatggcag tgtgatattt gcgggtcaaa
     1621 atctggaaga ggctttgagg caacttttga agtacttcca agacttaatg aaataaagtt
     1681 tggtagtggt gttatcgatg agcttttatt tctggacttg cctcgggaat atagatttcc
     1741 ttctggaatc atggtactag agtatgggca agctgttcaa gaaagtatat acgagcaact
     1801 tcgcgtggtt cgtgagggtc aacttaaagt tattttcaca cctgatttaa agatattaac
     1861 ctgggaattc tgtgcacgac gccatgaaga gcttcttccc cgtaggttgg ttgcacctca
     1921 ggtgaatcag ctgttacaag tggcacaaaa atgtcaagcc acaatagctg aaagtggttc
     1981 tgacggggtc tcccagcaag atttgcagac caatagcaac atggttgtga ccgccggccg
     2041 acagcttgca aggagcttag agttacaatc attgaatgac ttgggttttt ccaaaagata
     2101 tgttagatgc ttacagatat ctgaagttgt caatagtatg aaagacttga tggacttctg
     2161 ccgagacact aaagctggcc ctatagaggg tttaaaaacg tttcctcgac aaacgaactc
     2221 agccaagtca caaatgcaga agatgcaaga aatggaacag ataactaaca gtatcccggg
     2281 ggtcccagca gaccagaaca cactcaataa attagtaaca ctgcatcccg tacttggcaa
     2341 tcaattgaac aacaacaaca ataatcaaat gggtaaccga ggagcttcac taagtggttc
     2401 agctcaggct attgcacttt caaactacca gaacattctg atgagacaaa gttccatgaa
     2461 ctcaaattca caacaggaag cctcgtcatc gtttaataac acgaatccta acggatacca
     2521 atttcaaggc tctcccaata tggcggttgg cagtggcggt ctccaacaga ggcctatgtt
     2581 tcaggttcaa caacaacaac agcatcaatc accttctcac agtggcagcc aggccatgca
     2641 acaacacgtg attcagcaaa tgcttcaaga catgagtaat ggtggcggaa gcggaggtgg
     2701 tggtggtggt ggtggaggac caaagccgtc gttttccggt cagagtggtg ctagtgggag
     2761 tatgagtatg ggtagggaag ggttgagata cgggctttcg tcaacgggga catcaccccg
     2821 cccacctgct gttccaacaa gaagtaacag tttcaaatca tctgctgcag gtggtgcgac
     2881 cgttaattta ggaggtggtg gtggtaatca gaaggcggcc accagtgatc tgccgtcaca
     2941 tttatgtgat gatatagttc aggatattgc gagtgagttt accgggaatg ggtttttcga
     3001 caatgatgaa ttggaggaag gaatgggttt tggttggaag gcataaactt aatacttatg
     3061 tacagttgta ttgtattctg tattattata cacgttgatt tttatttcta cttttttttt
     3121 tttttttttt ttttttttgt tatggagttt ggtagttatc taattaatac attactaatt
     3181 ctgattctaa tgtgatcacc agaatagttt cagagaatgg gtgtgtttgg aagacatata
     3241 ttaggagctc attggagctt aaaatagt
//
LOCUS       XM_071830134             764 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839920), mRNA.
ACCESSION   XM_071830134
VERSION     XM_071830134.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..764
                     /gene="LOC139839920"
                     /note="uncharacterized LOC139839920; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     Proteins"
                     /db_xref="GeneID:139839920"
     CDS             46..585
                     /gene="LOC139839920"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686235.1"
                     /db_xref="GeneID:139839920"
                     /translation="MGWIGEQIDSVKSMHFRQLITQAISLGMIVTSALIIWKGLMCIT
                     GSESPVVVVLSGSMEPGFKRGDILFLHMNKEPIRAGEIVVFNVDGREIPIVHRVIKVH
                     EHEDGEVDVLTKGDNNFGDDRLLYAQGQMWLQRHHIMGRAIGFLPYVGWVTIIMTEQP
                     IIKYILIGALGLLVITSKE"
     misc_feature    115..570
                     /gene="LOC139839920"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; Region:
                     Peptidase_S24_S26; cl10465"
                     /db_xref="CDD:447902"
     misc_feature    order(214..216,331..333)
                     /gene="LOC139839920"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
ORIGIN      
        1 ctccctattc acttattaat cgagcacttt ctgaaaaaat taaggatggg atggatcggg
       61 gagcaaatcg attcagtgaa atcgatgcat ttcagacaac taatcaccca agcaattagc
      121 cttggtatga ttgttacatc tgccttaata atatggaaag gactgatgtg tattactggt
      181 agtgaatcac ctgttgttgt tgtgctttct ggaagtatgg aacctggttt taaaaggggt
      241 gatattttgt ttttgcatat gaataaggaa ccaattcgtg ctggagagat cgtggtcttc
      301 aatgttgatg gtcgggaaat tccaatagtt catcgtgtga ttaaggtaca cgagcatgaa
      361 gatggagaag ttgatgtcct tacaaaaggt gacaataatt ttggagatga caggcttctg
      421 tatgctcaag gtcagatgtg gttgcaacgg catcatatta tggggagagc tattggattt
      481 ttgccttacg ttggttgggt gacaattata atgacagaac agcccatcat caagtatatt
      541 ctaataggtg ctttggggct gctagtaata acttcgaaag agtgacaagc attattatcc
      601 cctaacagaa aggcaattca atcattataa aacaatctgt attgtgtctt tcagtttgta
      661 gacagatata gcttcaatat aaaccatttt gtgaaatgtg tatgttttca catttttcat
      721 acaattggaa ttattattta tagatgataa caggagttca caaa
//
LOCUS       XM_071830135            1647 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear pore complex protein
            NUP50B-like (LOC139839921), mRNA.
ACCESSION   XM_071830135
VERSION     XM_071830135.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1647
                     /gene="LOC139839921"
                     /note="nuclear pore complex protein NUP50B-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139839921"
     CDS             119..1267
                     /gene="LOC139839921"
                     /codon_start=1
                     /product="nuclear pore complex protein NUP50B-like"
                     /protein_id="XP_071686236.1"
                     /db_xref="GeneID:139839921"
                     /translation="MGDTENNLPPTKKRAAGRELSRDNPGLDDEEEVPGQETGTFKRA
                     SEEVLANRRIVKVRRSQSSSTPSAPSSNPFAAIRLVPPTDPTPTPAPVNNSQEIEKPS
                     NEKESPESVNKKPEIEDDDSCKQPELIPSEAEKKNDENNDKVEDNDENIPVSEKESNE
                     NNENDESTPAAGSVNSFGQLSSSQNAFTGLVGTGFSSSTFSFGSIPKTDQPTFPPFSF
                     STNGNSSLFGTSDKTEGAKIPSMQEVQVETGEENEKAVFTADSVLFEFIDGGWKERGK
                     GELKVNVLTTGTKKARLVMRARGNYRLILNASIFPDMKLTNMEKKGITFACLNSTGEG
                     QSGISTFALKFKDPSIVEEFRSVVMAHKGTTTAPFLKTPENSPKASDE"
     misc_feature    155..>295
                     /gene="LOC139839921"
                     /note="NUP50 (Nucleoporin 50 kDa); Region: NUP50;
                     pfam08911"
                     /db_xref="CDD:462629"
     misc_feature    860..1207
                     /gene="LOC139839921"
                     /note="Ran-binding protein 2, repeat 1; Region:
                     RanBD_NUP50_plant; cd13169"
                     /db_xref="CDD:269990"
     misc_feature    order(902..904,908..916,923..940,992..994,998..1000,
                     1004..1009,1013..1015,1019..1027,1034..1036,1040..1042,
                     1052..1054,1064..1066,1088..1090,1094..1096,1136..1138,
                     1148..1150)
                     /gene="LOC139839921"
                     /note="putative RAN binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:269990"
     polyA_site      1647
                     /gene="LOC139839921"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caacttctct agggttcgta tttatacagc ctctaacgca cgcaccgacc cacctagatc
       61 gacaacgcaa acgctacctt tcacgggcca gcactttgct tcaattgtaa gccttgaaat
      121 gggggacaca gagaacaacc taccacctac taaaaaacga gctgccggca gggaattatc
      181 ccgagataac cccggtcttg atgatgaaga agaagttcct ggacaagaaa ccggtacatt
      241 caagcgggca agtgaagaag tattggcaaa ccgtcgaata gtcaaagtca gacgcagtca
      301 atcatcgtca accccatccg caccttcttc aaatcccttt gcagctatac gtttagtacc
      361 tccaacagat cccacaccca ctcctgcacc tgttaacaac tcacaagaaa ttgaaaaacc
      421 ctctaatgaa aaggagtcgc cagaaagcgt gaataaaaaa cccgaaattg aggatgatga
      481 tagctgtaaa caacccgaat taatcccttc tgaagccgag aaaaagaacg atgaaaacaa
      541 cgacaaggta gaggataatg atgaaaatat ccctgtatct gagaaagaga gtaatgaaaa
      601 caatgagaat gacgaaagta cccctgcagc tggatctgtc aactcattcg gacagctttc
      661 aagtagccaa aacgcgttca ctggacttgt tgggacagga ttttcgagtt ccaccttttc
      721 attcgggtca atcccaaaaa ccgaccagcc tacttttcca cctttcagtt tctctaccaa
      781 tggaaattcg tccttatttg gaacatctga taaaaccgag ggagccaaaa taccatctat
      841 gcaagaagtt caagtggaaa ctggtgaaga aaacgagaag gcggttttta cagccgattc
      901 cgtacttttt gagtttattg atggcgggtg gaaagagcgg ggaaaaggag aattgaaggt
      961 caacgtgttg actactggaa cgaagaaagc gagacttgta atgagagcaa gagggaatta
     1021 tcgtttaatt ttgaacgcta gtatctttcc agatatgaag ctgacaaata tggagaaaaa
     1081 ggggatcacg tttgcttgtt tgaacagtac aggtgaaggg caaagtggta tttcgacatt
     1141 tgcgttgaag tttaaagatc cgtcaattgt tgaagagttt cgttccgttg ttatggcaca
     1201 taaaggaacc acaactgcac cctttcttaa gacacctgaa aattctccaa aagcatcgga
     1261 tgagtagacg tgtggaagga gacaattgta ctttcgtgaa ggttctcggt tgcatcagct
     1321 ttactttttc tgcccttgaa ggcagcaaaa ggtaaaaatc atatctataa ttaatattga
     1381 gtcgtgtacg ccatgttgtg gtgaagtctt attgtaaaag cagttatatt cgtatccatt
     1441 ttcttatctt gatagacatt tggtagttta gaattttgcc tgcaatctgg agtcttaaat
     1501 gttatgaaaa tttttgtgct ttggagctga gttaagtcgt ctgagtctcg atcgcataag
     1561 catatgtaag tggtggcaca gtgtgcaaat tggctaccca gtggtttaat cagtcttgta
     1621 tgatgatttg tttcgtggtt ttttttt
//
LOCUS       XM_071830136            1676 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450 704C1-like
            (LOC139839922), mRNA.
ACCESSION   XM_071830136
VERSION     XM_071830136.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1676
                     /gene="LOC139839922"
                     /note="cytochrome P450 704C1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139839922"
     CDS             1..1584
                     /gene="LOC139839922"
                     /codon_start=1
                     /product="cytochrome P450 704C1-like"
                     /protein_id="XP_071686237.1"
                     /db_xref="GeneID:139839922"
                     /translation="MKTLFLISTILFLATSSYFSTTFMLLLINLIILFVIVLLSFVVL
                     YFKEFISNDHRPPLVGSVFSVLIHFNHIFDYMTLIARKHHTFRFITLTHSQVYVADPI
                     NVEHILKSNFSNYPKGDINKGIMGDLFGNGIFAADGDMWRHQRKLASYEFSTKNLRDF
                     STSVFRFNTAKLVKKISESVVHNEIISLQDPLMKSTLDSIFKVGFGFDLDTLSGTDEV
                     SNRFMTAFEESAAIIFRRFVDLLWRVKRYFNIGSEAALKKNVKVIDSFVYELIQQKRN
                     QMKSKKLDGGKDDLVSRFMTESEINPVKLSDQYLRDIVLSFISAGKGTSANTLTWFFY
                     VLCKHTSIQEKVALEVKEATGAEYTRSIDAFSLELTETSLDKMHYLHATLTETLRLYP
                     PVPLNGKCAEKDDILPDGFKIKKGDGVNYMPYPMGRMTYIWGEDADVFRPERWLHDGV
                     FKPESPFKFPAFQGGPRICLGKEFAYRQMKMIAAFLVFFFKFQLVDESKEATYRTMFT
                     LHMDNGLPLYAIYRSKIES"
     misc_feature    280..1545
                     /gene="LOC139839922"
                     /note="cytochrome P450 family 86, subfamily A; Region:
                     CYP86A; cd11064"
                     /db_xref="CDD:410687"
     misc_feature    order(421..423,433..435,454..456,598..600,946..951,
                     958..963,970..975,982..984,1162..1164,1189..1191,
                     1195..1197,1267..1269,1381..1389,1399..1413,1420..1425)
                     /gene="LOC139839922"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410687"
     misc_feature    order(685..690,946..948,955..960,970..972,1183..1194)
                     /gene="LOC139839922"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410687"
     polyA_site      1676
                     /gene="LOC139839922"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgaaaactc tctttttgat ttccaccatt ttgttcctcg ccacaagcag ttatttttca
       61 acaaccttca tgctattact tattaacctc ataatattat ttgtgattgt actcttgtct
      121 tttgtagtac tatacttcaa agaatttata tctaatgatc atcggccacc cttagtaggc
      181 tcggttttca gtgtgctgat acactttaac catattttcg actatatgac attgattgca
      241 aggaaacacc acacttttcg ttttatcaca cttacacaca gtcaagtata tgttgctgat
      301 ccgattaacg ttgaacacat tcttaaatcc aacttttcga actaccccaa gggagatata
      361 aataaaggga taatgggaga tcttttcggt aatgggattt ttgcagcaga tggagatatg
      421 tggcgtcatc aacgaaagct tgcaagttat gagttttcaa ctaagaatct tagagatttt
      481 agtacttcag ttttcaggtt caacactgct aaactggtga aaaagatttc agaatcagtt
      541 gttcataatg aaattatttc tctacaggat cctttgatga aatccacttt agattcgata
      601 ttcaaggtgg gatttgggtt tgatcttgat actttatctg gtacagatga agttagtaat
      661 cgatttatga cagcatttga ggagtcagct gccatcatct tcaggcgatt tgttgatttg
      721 ttatggaggg ttaaaaggta ttttaacatt ggatcagaag ctgctctaaa gaaaaacgta
      781 aaagtgatcg atagctttgt gtacgaatta atacaacaaa aaaggaatca gatgaaaagc
      841 aaaaaacttg atggaggtaa agacgacttg gtatcaagat tcatgaccga aagcgagatt
      901 aatcccgtaa agttgagcga tcagtacttg agagacattg tacttagttt catcagtgct
      961 gggaagggta catcagcaaa cacgctcact tggttctttt atgtactttg taagcacact
     1021 tcgattcaag aaaaagttgc tcttgaagta aaagaagcca ctggagccga gtatacacgt
     1081 tctatcgatg cgttctcact cgagttaaca gaaacgtccc tagacaaaat gcattacctt
     1141 catgcaactt taaccgagac tctcagactc tatcctcccg ttcctctgaa tggaaaatgt
     1201 gcagaaaaag atgatattct accagatggt tttaaaataa aaaaaggaga cggtgttaac
     1261 tatatgcctt atccaatggg aagaatgaca tacatttggg gagaagatgc agacgtattt
     1321 cgacccgaaa gatggctcca tgatggtgtt tttaagcctg aaagtccatt caagtttccg
     1381 gcatttcaag gtggaccaag gatatgctta ggcaaagaat ttgcatacag acagatgaag
     1441 atgatagcag cttttcttgt tttctttttc aagtttcaac tggtggatga aagtaaggaa
     1501 gctacatata gaaccatgtt cacacttcac atggacaatg gactcccttt atacgcaatt
     1561 tatcgttcga aaatagaatc ttgaacttat aatcatgttg agtcgaaatt tcgttatgaa
     1621 gttgtgtgtc tagatgtttc aacatcaatt ataagtaacc aaatacgaag tcgttc
//
LOCUS       XM_071830137            2623 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase TOUSLED-like (LOC139839923), mRNA.
ACCESSION   XM_071830137
VERSION     XM_071830137.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2623
                     /gene="LOC139839923"
                     /note="serine/threonine-protein kinase TOUSLED-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139839923"
     CDS             166..2247
                     /gene="LOC139839923"
                     /codon_start=1
                     /product="serine/threonine-protein kinase TOUSLED-like"
                     /protein_id="XP_071686238.1"
                     /db_xref="GeneID:139839923"
                     /translation="MSEDVLLHFTSNSSNQSDQSLPSKIAKLEARMVGKTSASSTAAV
                     STTQVPVSQLVTTRSSITSSVAAAAKFGANDNAAICAESLDSSDSEEDDSNGGEFLIQ
                     ANFQKRRKLADDADSVAVDSTKVVADTKQKFAEPIDLKNGSDVSRRKQTRGKGNSTKS
                     RGRGSLLNDQTRSQNSTSNGLLENSHQKECIKPMEQLGQNEHAPFEEELISLRLKVST
                     LEEELRKARQEASESQHICQQLEKELKELKYDEQKVKPKRMKVISDLLISVSKAERQE
                     ARLKVRHDSLRLGNVGVIRAGTVISETWEDGQAIKDVNAHLRRLLELREAVDRQRKSL
                     KKKQQDKGENESESGGPEEDVIIQDEIYKSRLASIKREEETYVRERDRYELEKGRLIR
                     EMKRIRDEDGSRFNNYQILNHRYALLNLLGKGGFSEVYKAFDLVEYRYVACKLHGLNA
                     QWSEDKKQSYIRHAIREYNIHKTLVHHNIVRLWDIFEIDQNTFCTILEYCSGKDLDAV
                     LKATPILPEKEGRIIICQIFRGLVHLNKRNQRVIHYDLKPGNVLFDELGVAKVTDFGL
                     SKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILLYQMLFG
                     RRPFGHDQTQERILREDTIIKARKVEFPSRPSVSNEAKEFIRRCLTYNQEDRPDVLTI
                     AQDQYLIYSKK"
     misc_feature    <808..>1395
                     /gene="LOC139839923"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]; Region:
                     COG4913"
                     /db_xref="CDD:443941"
     misc_feature    1405..2226
                     /gene="LOC139839923"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Tousled-Like Kinase; Region: STKc_TLK; cd13990"
                     /db_xref="CDD:270892"
     misc_feature    order(1426..1440,1450..1452,1489..1491,1495..1497,
                     1603..1605,1654..1665,1675..1677,1681..1683,1798..1800,
                     1804..1806,1810..1815,1819..1821,1852..1854,1861..1863,
                     1924..1935)
                     /gene="LOC139839923"
                     /note="active site"
                     /db_xref="CDD:270892"
     misc_feature    order(1426..1440,1450..1452,1489..1491,1495..1497,
                     1603..1605,1654..1665,1675..1677,1798..1800,1804..1806,
                     1810..1815,1819..1821,1852..1854)
                     /gene="LOC139839923"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270892"
     misc_feature    order(1438..1440,1675..1677,1681..1683,1798..1800,
                     1804..1806,1810..1812,1861..1863,1924..1935)
                     /gene="LOC139839923"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270892"
     misc_feature    order(1849..1887,1894..1935)
                     /gene="LOC139839923"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270892"
ORIGIN      
        1 caaaatcaaa ataatttgtt atagaaaaac cctaattcgt caaatcacca attcgtgtca
       61 tataagtttc cattctgcac acgatcattc tcacgcacca ttatcataca tatatctata
      121 tatttgtatc tatactcaat ctcatttcag cttctgtatt caaccatgtc agaagacgtg
      181 cttctacact tcacatcgaa ctcctcaaat caatccgatc aatcgttgcc gtcaaaaatt
      241 gctaaactcg aagctcgaat ggttggtaaa acatcagctt cttctactgc tgctgtgtct
      301 actactcagg ttccggtttc gcaactcgta acaacgcggt cttcgattac gtcatctgtt
      361 gccgctgctg ctaagtttgg ggctaatgat aatgctgcta tttgtgcaga atctttagat
      421 tctagtgatt ctgaagaaga tgatagtaat ggaggagagt ttcttataca agctaacttt
      481 cagaagcgta gaaagctagc tgatgatgca gactcagttg cagtcgacag cactaaggta
      541 gtcgcagata caaagcaaaa atttgcagaa ccaatagatc ttaaaaatgg atcagatgta
      601 agtaggagaa aacaaacccg tggcaaggga aattctacta aatccagagg gcgtggttcc
      661 ctgcttaatg atcagacaag atctcaaaat tctacctcaa atggtcttct tgagaactcg
      721 catcagaagg agtgtatcaa gccaatggaa caacttggac aaaatgaaca tgctccgttc
      781 gaggaggaac tcatatcatt gcgtctcaaa gtatcgactc tagaggaaga gttgcgaaaa
      841 gcgcgccagg aggcctcaga aagtcaacat atatgccaac agctggaaaa ggaacttaag
      901 gagctaaaat atgatgaaca gaaggtgaaa cctaagagga tgaaagtcat atccgatttg
      961 ctgatatccg tttctaaagc tgagaggcaa gaagcacgat tgaaagtacg ccacgattct
     1021 ctgagacttg gcaatgtggg tgttatcaga gctggaacag tcatatcgga gacttgggaa
     1081 gatgggcaag ccattaagga cgtcaatgct cacctgaggc gtttgctaga attacgtgag
     1141 gctgttgata gacaacgaaa gtcacttaag aaaaagcagc aagataaagg agaaaatgaa
     1201 tccgagtcag gagggccaga ggaagatgtc atcatccagg atgaaattta caaatctcgt
     1261 ctagcaagca tcaaacgtga agaggaaact tatgttcgtg aacgtgatcg atatgaatta
     1321 gagaaggggc gacttattcg tgaaatgaaa cgtattagag atgaggatgg ttctcgtttt
     1381 aataattacc agatcctaaa ccatcgatat gctctcttaa atcttcttgg taaaggagga
     1441 ttcagtgagg tttacaaggc atttgatttg gtggaatata gatatgttgc atgtaagctt
     1501 catggtttaa acgcccaatg gagtgaggat aagaagcaaa gttacatacg tcatgccata
     1561 cgagaatata atattcacaa aacattggta caccataaca ttgttcggtt gtgggacatc
     1621 tttgagatag atcaaaatac tttttgcacg attctggagt attgcagcgg caaagacctt
     1681 gatgctgttc ttaaagcaac cccgatactg ccagaaaaag aaggtaggat aattatttgt
     1741 cagatattta gaggacttgt tcacttgaac aaaagaaatc agagggttat tcattatgat
     1801 ttgaagcctg ggaatgttct ttttgacgaa ttgggtgttg caaaggtaac tgattttggt
     1861 cttagcaaga ttgtggagga cgatgttggg tctcaaggca tggagcttac atctcaggga
     1921 gctggaacgt attggtacct cccaccagaa tgctttgagt taagtaagac cccactcatt
     1981 tcgtcaaagg ttgatgtgtg gtcagctggt attttacttt accaaatgct ttttggaaga
     2041 cgccccttcg ggcatgatca gacacaagaa cgcatattgc gtgaagatac cataataaaa
     2101 gctcgaaaag ttgaatttcc atctagacct tccgtatcaa atgaagcgaa ggaattcatt
     2161 aggagatgct taacgtataa ccaggaagat agacctgacg tgttaactat tgctcaagat
     2221 cagtacctta tatactccaa gaaatgatcc cgagggggaa taccggttac tcaaccaata
     2281 acttattttt ttgcaaccgg tggccgatct tccacatgag ctttttctag aagacgcgtg
     2341 ctaccttgat ctattgggct gaaaaaccac gtcaccttaa acacctcggc taataggaat
     2401 ttttcttact gtgaaatgtt tataatatat ttttttccca ccaagttggt gtcttgttcc
     2461 catcaccccc aaaacagttg tagtcattgt atgggttctt tcactttttg tatgttaata
     2521 tgaaaatggt acagatcatt ggcttaaatt taccatgtat cagatacaac aaattgcaaa
     2581 cagaagtatt tcaagctgaa aatgtacaga aacacttaaa tat
//
LOCUS       XM_071830138            4635 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cleavage and polyadenylation
            specificity factor subunit 1 (LOC139839924), transcript variant X1,
            mRNA.
ACCESSION   XM_071830138
VERSION     XM_071830138.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4635
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4635
                     /gene="LOC139839924"
                     /note="cleavage and polyadenylation specificity factor
                     subunit 1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139839924"
     CDS             99..4415
                     /gene="LOC139839924"
                     /codon_start=1
                     /product="cleavage and polyadenylation specificity factor
                     subunit 1 isoform X1"
                     /protein_id="XP_071686239.1"
                     /db_xref="GeneID:139839924"
                     /translation="MSYAACKLMHPATGIDNCASGFITHSPADVASRILPVQTEDVDA
                     VWPATSTPGVGPIPNLIVTAANVLEVYTVRVQEDGNVSNKDSATVLQPQRGGLMAGLS
                     GASLELVCSYRLHGNVESVGVLYSGAEDRTTGRRRDSIILTFRDAKISVLEFDDSVHG
                     LRTSSMHCFEGPKWLHLKKGRECFARGPLIKVDPLGRCAGVLVYGLQMIMLKASEAGG
                     LVGDDGASSTGGSVSARVQSSYLISLRDLDVKHVKDFIFVHGYIEPVLVLLHEKELTW
                     AGRLPYNHHTCIISALSISTTLKQHPLIWSATNLPHDAHKLLAVPSPIGGVLVVCANT
                     VHYHSQSTSCILALNNYAVPMDSSQEMSRSSFSVELDAANTTWLSNDVAMLSTKTGEL
                     LLLTLVHDGRIVQKLDLSKAKASVLTSGITTIGSSFFFLGSRLGDSLLVQFYCGAGSS
                     IGVKEEIGDIEGDIPSTKRLRRSSSDALQDMANDEELSLYGSDLNNAHSSQKSFSFTV
                     RDSFINVGPLKDFSYGLRMNADSNATGVAKQSNYELVCCSGHGKNGALCVLQRSIRPE
                     IITQEAIPGCKGLWTVYHKNSRNQAEHSKIAAADDEYHAYLIISLESRTMVLQTVSNL
                     EEVTENVDYFVQGSTIYAGNLFGRRRVIQVYARGARILDGAFMTQDITFPATNSEAPM
                     TVSSVSIADPYVLLMMTDGSIQLLVGDPSTCKMTINNLSAFQISKKSITACTLYHDKG
                     TDPWLRKTSTDAWLLTGVSEPVEGPDGAPQDQGDIYCAICYESGTLEIYDVPNFCCVY
                     TVHSFVSGRNFIGDNLFQDSSEKIFNNNSKDNSQNMKVVELAMHRWHGENSRPFLFGI
                     LTDGTILCYHAYLYEGSENASRSESVNDQSSLNLSGTSASRLKNLRFSRVPLDTYTRE
                     EMSAETPFPRMNMFKNVGGYPGFFLSGSRPTWFMKFRERLRIHPQLCDGPIIAFTVLH
                     NMYCNHGFIYVTSQGSLKICQLPSLLSYDNYWPVQKIPLKATPHQVTYFAEKNLYPLI
                     VSVPVAKPINQVLSTLVDQEAGHQIEHENSNIDGTYTVEEFEVRIMEPESSGGPWQMK
                     GAIHMQTSENALTVRVVTLTNTTTRENETLLAIGTAYVQGEDVAARGRVLLYSVESST
                     ESVQSKITEVYAKEMKGAISALASIQGYLLVASGPKVILHKWTGSELNGVAFFDAPPL
                     YVVSLNIVKNFILLGDIHKSIYFLSWKESASQLTLLAKDFGSLDCLATEFLIDGSTLS
                     LMVSDYDKNVQIYYYAPKVSESWKGQKLLSRAEFHVGSHATKFLRLQMLPASDRPNAP
                     SGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQ
                     FHSNGKAHRPGPDSIVDCELLCHYDMLPFEHQHEIANQIGTTRSQIISNLNDLAVGTS
                     FL"
     misc_feature    282..4382
                     /gene="LOC139839924"
                     /note="Pre-mRNA cleavage and polyadenylation specificity
                     factor [RNA processing and modification]; Region: SFT1;
                     COG5161"
                     /db_xref="CDD:227490"
ORIGIN      
        1 aaagccctag aagactaatc tccctcttac taaacccccg aacccaaagc cctgcattat
       61 cacaattcat caaattaggt cacgtttcac tcccagcaat gagctacgca gcttgcaaat
      121 tgatgcatcc ggccaccgga atcgacaact gcgcttcagg attcatcaca cattctccgg
      181 ccgatgtcgc ttctcgcatt ctccccgtcc agaccgaaga tgtcgacgct gtttggcctg
      241 ccacgtcgac accaggtgta ggccccattc ctaacctcat tgtgaccgca gcgaatgttc
      301 tagaagttta tacagttagg gttcaggaag acggtaatgt tagtaataag gattcggcta
      361 ccgtattgca accacaacgc ggcggactca tggctggtct ctccggtgca tcactagaac
      421 tcgtttgtag ctacaggttg cacggtaatg ttgaatcagt aggcgtgttg tattctggag
      481 cagaggaccg gacaactggc agaagaagag attctatcat tctaactttt cgagatgcaa
      541 aaatttcagt tctagaattt gatgattcag tgcatggact tcgtacaagt tcaatgcact
      601 gctttgaggg tcccaagtgg cttcatttga aaaaaggtag agaatgtttt gccagagggc
      661 cgctaattaa agtcgatccc ctaggaaggt gtgcaggggt acttgtgtat ggcttacaaa
      721 tgataatgct caaagcttct gaggctggtg gtttggtagg tgatgatggt gcttctagta
      781 ccggaggctc agtttctgca cgggtgcaat catcatattt gatcagctta cgagatcttg
      841 atgttaaaca tgtcaaggac tttatattcg ttcacggtta cattgaaccg gtgttggtgc
      901 tccttcatga gaaagaactg acttgggctg gccgccttcc atataaccat catacttgta
      961 taatttctgc tcttagtatc agcaccactt tgaagcaaca tccactcata tggtctgcca
     1021 ctaatcttcc acatgatgcc cacaagcttc ttgccgtgcc ctctccaatt ggaggagttc
     1081 ttgtagtttg tgcaaatact gttcattatc atagccagtc gacatcatgc atattggctt
     1141 tgaataacta tgctgttccc atggatagca gtcaggagat gtcaagatca agttttagcg
     1201 tggagcttga tgctgcaaac acaacttggc tatcaaacga cgttgccatg ctgtcaacaa
     1261 aaactggaga actacttttg ttgacacttg ttcatgatgg tcggattgtg caaaaacttg
     1321 atctttccaa ggcaaaagct tcagtactaa cttcgggaat cactactatt ggaagctcct
     1381 tctttttttt ggggagtcgt ttaggcgata gtttgcttgt gcagttttac tgtggagcag
     1441 gatcttccat cggtgtaaag gaagagattg gtgatattga aggagatatt ccatcaacaa
     1501 agcgattgag aagatcttcc tctgatgctt tgcaagatat ggcaaacgat gaagaacttt
     1561 ctttgtatgg ctcggatctc aacaatgccc attcttcgca gaaatcattc tcatttactg
     1621 tgagggattc atttattaat gttggtccac tgaaagactt ttcttatggt ttaagaatga
     1681 acgctgattc aaatgcaaca ggagttgcta agcaaagtaa ttatgaactt gtgtgctgtt
     1741 ctggccatgg aaaaaatggt gctctttgtg tgcttcaacg gtctattcgt ccagagatta
     1801 tcacccaaga agctatacca ggctgcaagg ggctatggac tgtctaccac aagaactcac
     1861 gtaatcaagc tgaacattca aaaatagcag ctgctgatga tgaatatcat gcatatttaa
     1921 ttatcagctt ggaaagtcga actatggtgc tacagacagt tagtaacctt gaagaggtca
     1981 ccgaaaatgt ggattatttc gttcaaggaa gtactatcta tgctgggaat ctttttggaa
     2041 ggaggcgggt catacaagtg tacgctcgcg gtgctcggat tcttgatggt gctttcatga
     2101 ctcaagatat aaccttcccg gctacaaatt ctgaagctcc tatgactgtg tcatctgtct
     2161 ccattgctga cccgtatgta ttattgatga tgactgatgg aagtattcag cttcttgtgg
     2221 gagatccctc cacttgcaag atgaccatca acaatttatc agcttttcaa atctctaaga
     2281 aatcaataac cgcgtgcaca ctctatcatg acaaaggaac agatccatgg cttaggaaaa
     2341 caagcactga tgcctggctt ttgacaggtg tcagtgaacc agtagaagga cctgatggtg
     2401 cacctcaaga tcagggtgat atctactgtg caatctgtta cgagagtggg accctagaaa
     2461 tatacgacgt ccctaatttc tgttgtgttt atactgttca tagctttgtg tctggaagaa
     2521 actttattgg agacaactta ttccaagatt catctgaaaa aatattcaat aataatagca
     2581 aggataatag ccagaacatg aaagttgttg aattggccat gcataggtgg catggagaga
     2641 atagccgtcc ttttcttttt ggaatactga ctgatggaac cattctctgt taccatgctt
     2701 acttatatga gggttcagaa aatgcttcta gaagtgaatc tgttaatgat caaagttctt
     2761 tgaacttgag tggcacgagt gcttcaaggc ttaaaaatct gagattttca cgggtcccgt
     2821 tagatacgta cacacgagag gagatgtcag ctgaaacccc gtttccacga atgaatatgt
     2881 ttaagaatgt tggtggttac ccgggtttct tcctctctgg ttctcggccc acttggttca
     2941 tgaaattcag agagcggtta cgaattcatc ctcagctttg tgatggacca attatcgcct
     3001 tcacagttct tcataacatg tattgtaatc atgggttcat atatgtcacc tcacagggta
     3061 gtttgaagat ctgccaactt ccatctttgc tatcttatga caattattgg ccagtacaaa
     3121 agattccctt gaaggccact cctcatcaag ttacatattt tgctgagaag aacttgtacc
     3181 cgctcatagt ttctgttcct gtcgcaaagc ctataaatca agtcctatca actttggttg
     3241 atcaagaggc tggccaccaa atcgagcatg aaaattctaa tattgacggc acatacaccg
     3301 tagaagaatt tgaagtcaga attatggaac ctgaaagttc tggtggccca tggcaaatga
     3361 aaggagcaat tcacatgcaa acttctgaaa atgcattgac agtcagagtg gttacattaa
     3421 ctaatacaac aactagagaa aatgaaacac ttttggcaat cgggacagct tacgtgcaag
     3481 gggaggatgt agctgcaaga gggcgtgtac ttctgtattc tgttgagagt agcaccgaaa
     3541 gtgtacagtc aaagattaca gaggtgtacg caaaggaaat gaaaggtgcc atatcggctt
     3601 tagcttcaat tcaaggttat ctattagttg cttcgggccc caaagttatc ctacacaaat
     3661 ggactggctc cgaattgaat ggagttgctt tttttgatgc tccaccactt tatgtagtga
     3721 gccttaatat tgttaagaat tttattctgc taggggatat ccacaaaagc atatattttt
     3781 taagttggaa agaaagtgca tctcaattga ctttgttggc caaggatttt ggttctttgg
     3841 attgtttagc aacagagttt ctgattgatg gaagcactct tagtcttatg gtctctgatt
     3901 acgataagaa tgtacagata tattattatg caccaaaggt ttcagagagt tggaaaggac
     3961 agaaactact ctcaagggcc gagtttcacg ttgggtccca cgcgaccaaa tttctacggt
     4021 tacaaatgct tccagcttct gatcgaccca atgctccttc aggatcggat aaaacaaacc
     4081 gtttcgccct tttgtttggt accttagatg gcagcattgg ttgtattgca cctcttgatg
     4141 aactcacatt tcgcagactt caatcactgc aaaaaaaact cgttgatgct gttccacatg
     4201 ttgctggatt gaatcccaga tcttttcgcc agttccattc aaatggaaaa gctcaccgtc
     4261 ctggtcctga cagcattgtt gattgtgagc tgctgtgtca ctatgatatg cttccgttcg
     4321 aacatcagca tgaaatcgct aaccagattg ggacaacacg ttcacagata atttctaatt
     4381 tgaacgacct cgctgttggt actagctttt tgtgaagtgt atgcatatca ctattttcaa
     4441 cctgctactg ttgtacaatt caatcgtgta ggctgttgag tttacagttt catgcaactt
     4501 attattggga acattgtata agttgagaag tgtttatttc gaagtagtta atagaataca
     4561 gttatggtat tcaagacttg taaatagtag tgtgagagaa aaaaaatcaa atataatcca
     4621 atttatggtc ggtta
//
LOCUS       XM_071830139            4614 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cleavage and polyadenylation
            specificity factor subunit 1 (LOC139839924), transcript variant X2,
            mRNA.
ACCESSION   XM_071830139
VERSION     XM_071830139.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4614
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4614
                     /gene="LOC139839924"
                     /note="cleavage and polyadenylation specificity factor
                     subunit 1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139839924"
     CDS             99..4394
                     /gene="LOC139839924"
                     /codon_start=1
                     /product="cleavage and polyadenylation specificity factor
                     subunit 1 isoform X2"
                     /protein_id="XP_071686240.1"
                     /db_xref="GeneID:139839924"
                     /translation="MSYAACKLMHPATGIDNCASGFITHSPADVASRILPVQTEDVDA
                     VWPATSTPGVGPIPNLIVTAANVLEVYTVRVQEDGNVSNKDSATVLQPQRGGLMAGLS
                     GASLELVCSYRLHGNVESVGVLYSGAEDRTTGRRRDSIILTFRDAKISVLEFDDSVHG
                     LRTSSMHCFEGPKWLHLKKGRECFARGPLIKVDPLGRCAGVLVYGLQMIMLKASEAGG
                     LVGDDGASSTGGSVSARVQSSYLISLRDLDVKHVKDFIFVHGYIEPVLVLLHEKELTW
                     AGRLPYNHHTCIISALSISTTLKQHPLIWSATNLPHDAHKLLAVPSPIGGVLVVCANT
                     VHYHSQSTSCILALNNYAVPMDSSQEMSRSSFSVELDAANTTWLSNDVAMLSTKTGEL
                     LLLTLVHDGRIVQKLDLSKAKASVLTSGITTIGSSFFFLGSRLGDSLLVQFYCGAGSS
                     IGVKEEIGDIEGDIPSTKRLRRSSSDALQDMANDEELSLYGSDLNNAHSSQKSFSFTV
                     RDSFINVGPLKDFSYGLRMNADSNATGVAKQSNYELVCCSGHGKNGALCVLQRSIRPE
                     IITQEAIPGCKGLWTVYHKNSRNQAEHSKIAAADDEYHAYLIISLESRTMVLQTVSNL
                     EEVTENVDYFVQGSTIYAGNLFGRRRVIQVYARGARILDGAFMTQDITFPATNSEAPM
                     TVSSVSIADPYVLLMMTDGSIQLLVGDPSTCKMTINNLSAFQISKKSITACTLYHDKG
                     TDPWLRKTSTDAWLLTGVSEPVEGPDGAPQDQGDIYCAICYESGTLEIYDVPNFCCVY
                     TVHSFVSGRNFIGDNLFQDSSEKIFNNNSKDNSQNMKVVELAMHRWHGENSRPFLFGI
                     LTDGTILCYHAYLYEGSENASRSESVNDQSSLNLSGTSASRLKNLRFSRVPLDTYTRE
                     EMSAETPFPRMNMFKNVGGYPGFFLSGSRPTWFMKFRERLRIHPQLCDGPIIAFTVLH
                     NMYCNHGFIYVTSQGSLKICQLPSLLSYDNYWPVQKIPLKATPHQVTYFAEKNLYPLI
                     VSVPVAKPINQVLSTLVDQEAGHQIEHENSNIDGTYTVEEFEVRIMEPESSGGPWQMK
                     GAIHMQTSENALTVRVVTLTNTTTRENETLLAIGTAYVQGEDVAARGRVLLYSVESST
                     ESVQSKITEVYAKEMKGAISALASIQGYLLVASGPKVILHKWTGSELNGVAFFDAPPL
                     YVVSLNIVKNFILLGDIHKSIYFLSWKESASQLTLLAKDFGSLDCLATEFLIDGSTLS
                     LMVSDYDKNVQVSESWKGQKLLSRAEFHVGSHATKFLRLQMLPASDRPNAPSGSDKTN
                     RFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKA
                     HRPGPDSIVDCELLCHYDMLPFEHQHEIANQIGTTRSQIISNLNDLAVGTSFL"
     misc_feature    282..4361
                     /gene="LOC139839924"
                     /note="Pre-mRNA cleavage and polyadenylation specificity
                     factor [RNA processing and modification]; Region: SFT1;
                     COG5161"
                     /db_xref="CDD:227490"
ORIGIN      
        1 aaagccctag aagactaatc tccctcttac taaacccccg aacccaaagc cctgcattat
       61 cacaattcat caaattaggt cacgtttcac tcccagcaat gagctacgca gcttgcaaat
      121 tgatgcatcc ggccaccgga atcgacaact gcgcttcagg attcatcaca cattctccgg
      181 ccgatgtcgc ttctcgcatt ctccccgtcc agaccgaaga tgtcgacgct gtttggcctg
      241 ccacgtcgac accaggtgta ggccccattc ctaacctcat tgtgaccgca gcgaatgttc
      301 tagaagttta tacagttagg gttcaggaag acggtaatgt tagtaataag gattcggcta
      361 ccgtattgca accacaacgc ggcggactca tggctggtct ctccggtgca tcactagaac
      421 tcgtttgtag ctacaggttg cacggtaatg ttgaatcagt aggcgtgttg tattctggag
      481 cagaggaccg gacaactggc agaagaagag attctatcat tctaactttt cgagatgcaa
      541 aaatttcagt tctagaattt gatgattcag tgcatggact tcgtacaagt tcaatgcact
      601 gctttgaggg tcccaagtgg cttcatttga aaaaaggtag agaatgtttt gccagagggc
      661 cgctaattaa agtcgatccc ctaggaaggt gtgcaggggt acttgtgtat ggcttacaaa
      721 tgataatgct caaagcttct gaggctggtg gtttggtagg tgatgatggt gcttctagta
      781 ccggaggctc agtttctgca cgggtgcaat catcatattt gatcagctta cgagatcttg
      841 atgttaaaca tgtcaaggac tttatattcg ttcacggtta cattgaaccg gtgttggtgc
      901 tccttcatga gaaagaactg acttgggctg gccgccttcc atataaccat catacttgta
      961 taatttctgc tcttagtatc agcaccactt tgaagcaaca tccactcata tggtctgcca
     1021 ctaatcttcc acatgatgcc cacaagcttc ttgccgtgcc ctctccaatt ggaggagttc
     1081 ttgtagtttg tgcaaatact gttcattatc atagccagtc gacatcatgc atattggctt
     1141 tgaataacta tgctgttccc atggatagca gtcaggagat gtcaagatca agttttagcg
     1201 tggagcttga tgctgcaaac acaacttggc tatcaaacga cgttgccatg ctgtcaacaa
     1261 aaactggaga actacttttg ttgacacttg ttcatgatgg tcggattgtg caaaaacttg
     1321 atctttccaa ggcaaaagct tcagtactaa cttcgggaat cactactatt ggaagctcct
     1381 tctttttttt ggggagtcgt ttaggcgata gtttgcttgt gcagttttac tgtggagcag
     1441 gatcttccat cggtgtaaag gaagagattg gtgatattga aggagatatt ccatcaacaa
     1501 agcgattgag aagatcttcc tctgatgctt tgcaagatat ggcaaacgat gaagaacttt
     1561 ctttgtatgg ctcggatctc aacaatgccc attcttcgca gaaatcattc tcatttactg
     1621 tgagggattc atttattaat gttggtccac tgaaagactt ttcttatggt ttaagaatga
     1681 acgctgattc aaatgcaaca ggagttgcta agcaaagtaa ttatgaactt gtgtgctgtt
     1741 ctggccatgg aaaaaatggt gctctttgtg tgcttcaacg gtctattcgt ccagagatta
     1801 tcacccaaga agctatacca ggctgcaagg ggctatggac tgtctaccac aagaactcac
     1861 gtaatcaagc tgaacattca aaaatagcag ctgctgatga tgaatatcat gcatatttaa
     1921 ttatcagctt ggaaagtcga actatggtgc tacagacagt tagtaacctt gaagaggtca
     1981 ccgaaaatgt ggattatttc gttcaaggaa gtactatcta tgctgggaat ctttttggaa
     2041 ggaggcgggt catacaagtg tacgctcgcg gtgctcggat tcttgatggt gctttcatga
     2101 ctcaagatat aaccttcccg gctacaaatt ctgaagctcc tatgactgtg tcatctgtct
     2161 ccattgctga cccgtatgta ttattgatga tgactgatgg aagtattcag cttcttgtgg
     2221 gagatccctc cacttgcaag atgaccatca acaatttatc agcttttcaa atctctaaga
     2281 aatcaataac cgcgtgcaca ctctatcatg acaaaggaac agatccatgg cttaggaaaa
     2341 caagcactga tgcctggctt ttgacaggtg tcagtgaacc agtagaagga cctgatggtg
     2401 cacctcaaga tcagggtgat atctactgtg caatctgtta cgagagtggg accctagaaa
     2461 tatacgacgt ccctaatttc tgttgtgttt atactgttca tagctttgtg tctggaagaa
     2521 actttattgg agacaactta ttccaagatt catctgaaaa aatattcaat aataatagca
     2581 aggataatag ccagaacatg aaagttgttg aattggccat gcataggtgg catggagaga
     2641 atagccgtcc ttttcttttt ggaatactga ctgatggaac cattctctgt taccatgctt
     2701 acttatatga gggttcagaa aatgcttcta gaagtgaatc tgttaatgat caaagttctt
     2761 tgaacttgag tggcacgagt gcttcaaggc ttaaaaatct gagattttca cgggtcccgt
     2821 tagatacgta cacacgagag gagatgtcag ctgaaacccc gtttccacga atgaatatgt
     2881 ttaagaatgt tggtggttac ccgggtttct tcctctctgg ttctcggccc acttggttca
     2941 tgaaattcag agagcggtta cgaattcatc ctcagctttg tgatggacca attatcgcct
     3001 tcacagttct tcataacatg tattgtaatc atgggttcat atatgtcacc tcacagggta
     3061 gtttgaagat ctgccaactt ccatctttgc tatcttatga caattattgg ccagtacaaa
     3121 agattccctt gaaggccact cctcatcaag ttacatattt tgctgagaag aacttgtacc
     3181 cgctcatagt ttctgttcct gtcgcaaagc ctataaatca agtcctatca actttggttg
     3241 atcaagaggc tggccaccaa atcgagcatg aaaattctaa tattgacggc acatacaccg
     3301 tagaagaatt tgaagtcaga attatggaac ctgaaagttc tggtggccca tggcaaatga
     3361 aaggagcaat tcacatgcaa acttctgaaa atgcattgac agtcagagtg gttacattaa
     3421 ctaatacaac aactagagaa aatgaaacac ttttggcaat cgggacagct tacgtgcaag
     3481 gggaggatgt agctgcaaga gggcgtgtac ttctgtattc tgttgagagt agcaccgaaa
     3541 gtgtacagtc aaagattaca gaggtgtacg caaaggaaat gaaaggtgcc atatcggctt
     3601 tagcttcaat tcaaggttat ctattagttg cttcgggccc caaagttatc ctacacaaat
     3661 ggactggctc cgaattgaat ggagttgctt tttttgatgc tccaccactt tatgtagtga
     3721 gccttaatat tgttaagaat tttattctgc taggggatat ccacaaaagc atatattttt
     3781 taagttggaa agaaagtgca tctcaattga ctttgttggc caaggatttt ggttctttgg
     3841 attgtttagc aacagagttt ctgattgatg gaagcactct tagtcttatg gtctctgatt
     3901 acgataagaa tgtacaggtt tcagagagtt ggaaaggaca gaaactactc tcaagggccg
     3961 agtttcacgt tgggtcccac gcgaccaaat ttctacggtt acaaatgctt ccagcttctg
     4021 atcgacccaa tgctccttca ggatcggata aaacaaaccg tttcgccctt ttgtttggta
     4081 ccttagatgg cagcattggt tgtattgcac ctcttgatga actcacattt cgcagacttc
     4141 aatcactgca aaaaaaactc gttgatgctg ttccacatgt tgctggattg aatcccagat
     4201 cttttcgcca gttccattca aatggaaaag ctcaccgtcc tggtcctgac agcattgttg
     4261 attgtgagct gctgtgtcac tatgatatgc ttccgttcga acatcagcat gaaatcgcta
     4321 accagattgg gacaacacgt tcacagataa tttctaattt gaacgacctc gctgttggta
     4381 ctagcttttt gtgaagtgta tgcatatcac tattttcaac ctgctactgt tgtacaattc
     4441 aatcgtgtag gctgttgagt ttacagtttc atgcaactta ttattgggaa cattgtataa
     4501 gttgagaagt gtttatttcg aagtagttaa tagaatacag ttatggtatt caagacttgt
     4561 aaatagtagt gtgagagaaa aaaaatcaaa tataatccaa tttatggtcg gtta
//
LOCUS       XM_071830140            1638 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839925), mRNA.
ACCESSION   XM_071830140
VERSION     XM_071830140.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1638
                     /gene="LOC139839925"
                     /note="uncharacterized LOC139839925; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139839925"
     CDS             175..1200
                     /gene="LOC139839925"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686241.1"
                     /db_xref="GeneID:139839925"
                     /translation="MGCSFSGLNALYDSKSGDVWINENRFKIVRQLGEGGFAFVFLVK
                     EVINETSSDGGVSSKFKDPSHISDDGTYAMKKVLIQTNEQLQFVKEEIRISSLFNHPN
                     LLPLLDHAIISVKGTPEQNWTHEAYLLFPVHLDGTLLDNAKAMKAKKEVFTTSDVLQI
                     FRQLCAGLQHMHNLETPYAHNDVKPGNVLLTHRKGQPPLAILMDFGSARPARKEIRSR
                     SEALQLQEWASEHVSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYA
                     LGESGGSLQLAVINAQIKWPTNAKPSYPEPLHQFVSWMLQPQATVRPRIDDILIHVDK
                     LIAKFSV"
     misc_feature    247..1185
                     /gene="LOC139839925"
                     /note="Catalytic domain of Serine/Threonine Kinase 16;
                     Region: STKc_16; cd13986"
                     /db_xref="CDD:270888"
     misc_feature    order(268..282,292..294,391..393,397..399,484..486,
                     562..573,583..585,589..591,718..720,724..726,730..735,
                     739..741,784..786,793..795,868..879)
                     /gene="LOC139839925"
                     /note="active site"
                     /db_xref="CDD:270888"
     misc_feature    order(268..282,292..294,391..393,397..399,484..486,
                     562..573,583..585,718..720,724..726,730..735,739..741,
                     784..786)
                     /gene="LOC139839925"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270888"
     misc_feature    order(280..282,583..585,589..591,718..720,724..726,
                     730..732,793..795,868..879)
                     /gene="LOC139839925"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270888"
     misc_feature    order(781..861,865..879)
                     /gene="LOC139839925"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270888"
ORIGIN      
        1 acagagttga agagtgagta gttgacattt cacttccctt tgttccaaca tctttgcatc
       61 atccctggat cttgtatttt ctaacacaca gatctctctc tctctctatt ctctttcaat
      121 tctttctttt ttaattttca taagaaatag aaaaagctgt gtgttggtac aaaaatgggg
      181 tgttcatttt caggactgaa cgcactgtac gattctaaaa gtggtgatgt ttggatcaat
      241 gaaaaccggt ttaagattgt ccgacagctc ggtgaaggtg gtttcgcatt tgtgtttctt
      301 gtgaaagaag ttatcaatga gactagttct gatggtggtg tttcatccaa gttcaaagat
      361 ccatctcaca tctctgatga tggaacttat gctatgaaga aagtgttgat tcagacgaat
      421 gaacagttgc agtttgtgaa agaggagatt cggatctcgt cgttgtttaa tcacccgaat
      481 ctgcttccac tgcttgatca tgcaattatt tcagtgaagg gcacaccaga acagaattgg
      541 acacacgaag catacctgtt atttcccgtc catttggatg ggacgttgtt ggacaacgca
      601 aaagctatga aagctaagaa ggaggtcttt actacctctg acgttcttca aattttccgc
      661 cagctttgtg caggacttca gcatatgcac aatcttgaaa ctccgtatgc tcataatgat
      721 gttaaacccg gaaatgtcct attaacacat cgtaaaggac agccaccatt ggccattttg
      781 atggattttg gaagcgcccg tcctgctcga aaggagatcc gatctcgatc cgaggcccta
      841 cagctgcagg aatgggcatc ggagcacgtg tcagcgcctt tccgagctcc agaattgtgg
      901 gattgcccaa gccatgcaga tattgatgaa aggaccgatg tatggtcttt aggttgcacg
      961 ttgtatgcca ttatgtacgg tgtatctccg tttgagtacg cattagggga gtcaggtgga
     1021 agcttgcaat tggctgtcat aaatgcacaa attaagtggc caacaaacgc taaaccatca
     1081 tatccagaac ctcttcatca gtttgtttca tggatgcttc aacctcaagc tacagttaga
     1141 cctcgcattg acgacatcct cattcatgtc gacaagttga tcgccaaatt ctccgtttaa
     1201 agatttatgt atgcagttcc cggtaccata cgtacgaatc ttgtcagtga cagttgcagt
     1261 tggtacgata tcaaaacaac ggttaattta ttgttttttt agaaatttta tatacatatc
     1321 attgcccata tacacatgaa tgtgactcgg aatcgctttg tgcacgaatt tgtgagccat
     1381 ggtcaagtag ttggagatgg gcgtggaatc gtaaccgcgg ttgtctgtgt atcattttac
     1441 tataaatact tgttttcaag ttttgtaata tttatgtgag gttagccaaa taaatatatt
     1501 ttgtgatttg taaaacatat acatctttat gtatttgggt cattatgtaa tatttatgag
     1561 ggccattttg ccgaattatg ttagatgcaa taggcgcttg atgacaaagt atttttactc
     1621 agatgtaagc ggtttaat
//
LOCUS       XR_011757151            2395 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839926), transcript variant X1, ncRNA.
ACCESSION   XR_011757151
VERSION     XR_011757151.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2395
                     /gene="LOC139839926"
                     /note="uncharacterized LOC139839926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839926"
     ncRNA           1..2395
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839926"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839926"
ORIGIN      
        1 cttcaaaccg tccatctctc catccctctt caaaattcct taaacctccg gagcttttcc
       61 atcgtcgatt atggcttaat gacggcgtat taggcgatgg cactaccacc aattaatcgg
      121 tgacgttttt ctccacacaa ccatacagat tttgtatatt aatgtcagat ccttcgaaat
      181 cgacggattc atctccggtt actttaatgt cgaggaagac gacggcttta acatgaaggt
      241 aataccattg gtgtggttcg gttagggttt gcagcgattc aaaggcattt acagattcat
      301 gttaaatcaa cggtgcccta aataattttc attataaata gacggtgaaa ggtaagggtt
      361 taatttgtgt ttatcatcat accctacatg cttttattca ttctaaattt ttatatctgt
      421 ttaattaaaa tcattgatgc aatttatttt tgttgttgtt ctttcatttc gtttttgatt
      481 gattgtggcg atattcttaa tttttgattt tcgattgctg aaatctaatg tttgtcaaag
      541 ttatttcttc tgcgattgct aaaaatccca acagaaaagc acaaagtgtt accaatttgg
      601 tgttctattc gtgttgtaga tgtatgatgc gatcgtttcc ttcagctgaa gagcatcaga
      661 agcgtcatga aaaaagttca tggatggatc actatctttg gctatacagt gttttttgtt
      721 cctacttttg ttattatatc ctttaagggt atcttgattt aagtagtttt caagatagct
      781 tatgagcttc aaaattgttt agagttttcg ctttggactt tgtgatacta aatttgtcta
      841 caaaatagaa caagaacacc tccctggatt agcctcagct agcattttca caagtatttg
      901 tagatttcaa atttctcata tctcacatag ttaaacttca aattttttaa caattcattg
      961 ctttaaaaaa taaaaataaa taacaactcc tttcatgata atgggtcttt ttttggtagg
     1021 aaaacaaaga gggccttgag ttgctaagac aaccattgaa caagctggtt acacgggaaa
     1081 gtctgtagat gtattagtgc taccttttca cgttggttat gagggggtct gggtgcatgt
     1141 gcttctgctg ttgttttaaa gaaaccagtc tcaaggtcta caatgttgta tctatgtgta
     1201 ccgaacgata gtgtctcatc aggtgtacgg ctgcttcctc atcaggttgg ttatgaggag
     1261 cttggctgcg tctgcctctg ttgttatttt taacaaacct atgcacgggc cagaaaatgt
     1321 tttaccgcac ttggttggca ctctgttgac tattttgtgg atgattcatt gctaaccaat
     1381 gcaacagcga acacacatag tatatgtgtt tttagcttcg tcatagctca agggtggtaa
     1441 aatgggcggt tggataatga ttaataacag gcacgtacta caaaccatta ttttagcaac
     1501 gaagtctcaa aaaaagggat gttgccattt tatgtcacag caggttctaa tgccatgcaa
     1561 gggacgtttt aattattgtt ttgacctcca gaaattgaaa gatgttgctt actaagatac
     1621 tgaatgagag gttctcatca tgattatatc ttgaaggtac aatatgttaa gaactaaatg
     1681 agaggttctc atcatgatta tatcttgaag gtacaatatg ttaagaacta aatgagaggt
     1741 tctgatcatg attatatctt gaagcatttt tatcaacggt gttgcaaact gatatgggtg
     1801 cactcaatag caattggaaa atcaaattac ttttgagatg ggaggaaagc tggcttcaag
     1861 cacttaaatt tcgggcattg aaggtgaaaa atgcaacatg ctttcaatct gtatgtatta
     1921 gtcgcacacg actgttgaaa gagtttttct cggtttagaa aaattaacga gtaccttact
     1981 tctcatcccg aatacattag gtaatatatg ggtcatggag aaggataagc atatggatta
     2041 tttcggtttg gatcagagtg ttaaaggcta caattttcga atttggtttc atcattattc
     2101 ttttgcaaag cccgctctct atggtcaatt ttttatgcat actgatgggt tgacttgtgc
     2161 tgacatttta acttttaaaa gtcaaacggt caatgttttg gggacttctt attctgtttt
     2221 tcttttggta ttatggtaaa tgtacttggt ttatgttaca gggtgtgtaa gtattaagga
     2281 ttctgatggt ggtacaagac atataattat aaaagatgct actttttggt tggtctacaa
     2341 tccatatgca aatttttaag tttatgggtt tttgtataac ttatttggca tttgt
//
LOCUS       XR_011757152            2341 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839926), transcript variant X2, ncRNA.
ACCESSION   XR_011757152
VERSION     XR_011757152.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2341
                     /gene="LOC139839926"
                     /note="uncharacterized LOC139839926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839926"
     ncRNA           1..2341
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839926"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839926"
ORIGIN      
        1 cttcaaaccg tccatctctc catccctctt caaaattcct taaacctccg gagcttttcc
       61 atcgtcgatt atggcttaat gacggcgtat taggcgatgg cactaccacc aattaatcgg
      121 tgacgttttt ctccacacaa ccatacagat tttgtatatt aatgtcagat ccttcgaaat
      181 cgacggattc atctccggtt actttaatgt cgaggaagac gacggcttta acatgaaggt
      241 aataccattg gtgtggttcg gttagggttt gcagcgattc aaaggcattt acagattcat
      301 gttaaatcaa cggtgcccta aataattttc attataaata gacggtgaaa ggtaagggtt
      361 taatttgtgt ttatcatcat accctacatg cttttattca ttctaaattt ttatatctgt
      421 ttaattaaaa tcattgatgc aatttatttt tgttgttgtt ctttcatttc gtttttgatt
      481 gattgtggcg atattcttaa tttttgattt tcgattgctg aaatctaatg tttgtcaaag
      541 ttatttcttc tgcgattgct aaaaatccca acagaaaagc acaaagtgtt accaatttgg
      601 tgttctattc gtgttgtaga tgtatgatgc gatcgtttcc ttcagctgaa gagcatcaga
      661 agcgtcatga aaaaagttca tggatggatc actatctttg gctatacagt gttttttgtt
      721 cctacttttg ttattatatc ctttaagggt atcttgattt aagtagtttt caagatagct
      781 tatgagcttc aaaattgttt agagttttcg ctttggactt tgtgatacta aatttgtcta
      841 caaaatagaa caagaacacc tccctggatt agcctcagct agcattttca caagtatttg
      901 tagatttcaa atttctcata tctcacatag ttaaacttca aattttttaa caattcattg
      961 ctttaaaaaa taaaaataaa taacaactcc tttcatgata atgggtcttt ttttggtagg
     1021 aaaacaaaga gggccttgag ttgctaagac aaccattgaa caagctggtt acacgggaaa
     1081 gtctgtagat gtattagtgc taccttttca cgttggttat gagggggtct gggtgcatgt
     1141 gcttctgctg ttgttttaaa gaaaccagtc tcaaggtcta caatgttgta tctatgtgta
     1201 ccgaacgata gtgtctcatc aggtgtacgg ctgcttcctc atcaggttgg ttatgaggag
     1261 cttggctgcg tctgcctctg ttgttatttt taacaaacct atgcacgggc cagaaaatgt
     1321 tttaccgcac ttggttggca ctctgttgac tattttgtgg atgattcatt gctaaccaat
     1381 gcaacagcga acacacatag tatatgtgtt tttagcttcg tcatagctca agggtggtaa
     1441 aatgggcggt tggataatga ttaataacag gcacgtacta caaaccatta ttttagcaac
     1501 gaagtctcaa aaaaagggat gttgccattt tatgtcacag caggttctaa tgccatgcaa
     1561 gggacgtttt aattattgtt ttgacctcca gaaattgaaa gatgttgctt actaagatac
     1621 tgaatgagag gttctcatca tgattatatc ttgaaggtac aatatgttaa gaactaaatg
     1681 agaggttctg atcatgatta tatcttgaag catttttatc aacggtgttg caaactgata
     1741 tgggtgcact caatagcaat tggaaaatca aattactttt gagatgggag gaaagctggc
     1801 ttcaagcact taaatttcgg gcattgaagg tgaaaaatgc aacatgcttt caatctgtat
     1861 gtattagtcg cacacgactg ttgaaagagt ttttctcggt ttagaaaaat taacgagtac
     1921 cttacttctc atcccgaata cattaggtaa tatatgggtc atggagaagg ataagcatat
     1981 ggattatttc ggtttggatc agagtgttaa aggctacaat tttcgaattt ggtttcatca
     2041 ttattctttt gcaaagcccg ctctctatgg tcaatttttt atgcatactg atgggttgac
     2101 ttgtgctgac attttaactt ttaaaagtca aacggtcaat gttttgggga cttcttattc
     2161 tgtttttctt ttggtattat ggtaaatgta cttggtttat gttacagggt gtgtaagtat
     2221 taaggattct gatggtggta caagacatat aattataaaa gatgctactt tttggttggt
     2281 ctacaatcca tatgcaaatt tttaagttta tgggtttttg tataacttat ttggcatttg
     2341 t
//
LOCUS       XR_011757153            2269 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839926), transcript variant X3, ncRNA.
ACCESSION   XR_011757153
VERSION     XR_011757153.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2269
                     /gene="LOC139839926"
                     /note="uncharacterized LOC139839926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839926"
     ncRNA           1..2269
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839926"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839926"
ORIGIN      
        1 cttcaaaccg tccatctctc catccctctt caaaattcct taaacctccg gagcttttcc
       61 atcgtcgatt atggcttaat gacggcgtat taggcgatgg cactaccacc aattaatcgg
      121 tgacgttttt ctccacacaa ccatacagat tttgtatatt aatgtcagat ccttcgaaat
      181 cgacggattc atctccggtt actttaatgt cgaggaagac gacggcttta acatgaaggt
      241 aataccattg gtgtggttcg gttagggttt gcagcgattc aaaggcattt acagattcat
      301 gttaaatcaa cggtgcccta aataattttc attataaata gacggtgaaa ggtaagggtt
      361 taatttgtgt ttatcatcat accctacatg cttttattca ttctaaattt ttatatctgt
      421 ttaattaaaa tcattgatgc aatttatttt tgttgttgtt ctttcatttc gtttttgatt
      481 gattgtggcg atattcttaa tttttgattt tcgattgctg aaatctaatg tttgtcaaag
      541 ttatttcttc tgcgattgct aaaaatccca acagaaaagc acaaagtgtt accaatttgg
      601 tgttctattc gtgttgtaga tgtatgatgc gatcgtttcc ttcagctgaa gagcatcaga
      661 agcgtcatga aaaaagttca tggatggatc actatctttg gctatacagt gttttttgtt
      721 cctacttttg ttattatatc ctttaagggt atcttgattt aagtagtttt caagatagct
      781 tatgagcttc aaaattgttt agagttttcg ctttggactt tgtgatacta aatttgtcta
      841 caaaatagaa caagaacacc tccctggatt agcctcagct agcattttca caagaaaaca
      901 aagagggcct tgagttgcta agacaaccat tgaacaagct ggttacacgg gaaagtctgt
      961 agatgtatta gtgctacctt ttcacgttgg ttatgagggg gtctgggtgc atgtgcttct
     1021 gctgttgttt taaagaaacc agtctcaagg tctacaatgt tgtatctatg tgtaccgaac
     1081 gatagtgtct catcaggtgt acggctgctt cctcatcagg ttggttatga ggagcttggc
     1141 tgcgtctgcc tctgttgtta tttttaacaa acctatgcac gggccagaaa atgttttacc
     1201 gcacttggtt ggcactctgt tgactatttt gtggatgatt cattgctaac caatgcaaca
     1261 gcgaacacac atagtatatg tgtttttagc ttcgtcatag ctcaagggtg gtaaaatggg
     1321 cggttggata atgattaata acaggcacgt actacaaacc attattttag caacgaagtc
     1381 tcaaaaaaag ggatgttgcc attttatgtc acagcaggtt ctaatgccat gcaagggacg
     1441 ttttaattat tgttttgacc tccagaaatt gaaagatgtt gcttactaag atactgaatg
     1501 agaggttctc atcatgatta tatcttgaag gtacaatatg ttaagaacta aatgagaggt
     1561 tctcatcatg attatatctt gaaggtacaa tatgttaaga actaaatgag aggttctgat
     1621 catgattata tcttgaagca tttttatcaa cggtgttgca aactgatatg ggtgcactca
     1681 atagcaattg gaaaatcaaa ttacttttga gatgggagga aagctggctt caagcactta
     1741 aatttcgggc attgaaggtg aaaaatgcaa catgctttca atctgtatgt attagtcgca
     1801 cacgactgtt gaaagagttt ttctcggttt agaaaaatta acgagtacct tacttctcat
     1861 cccgaataca ttaggtaata tatgggtcat ggagaaggat aagcatatgg attatttcgg
     1921 tttggatcag agtgttaaag gctacaattt tcgaatttgg tttcatcatt attcttttgc
     1981 aaagcccgct ctctatggtc aattttttat gcatactgat gggttgactt gtgctgacat
     2041 tttaactttt aaaagtcaaa cggtcaatgt tttggggact tcttattctg tttttctttt
     2101 ggtattatgg taaatgtact tggtttatgt tacagggtgt gtaagtatta aggattctga
     2161 tggtggtaca agacatataa ttataaaaga tgctactttt tggttggtct acaatccata
     2221 tgcaaatttt taagtttatg ggtttttgta taacttattt ggcatttgt
//
LOCUS       XR_011757154            2278 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839926), transcript variant X4, ncRNA.
ACCESSION   XR_011757154
VERSION     XR_011757154.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2278
                     /gene="LOC139839926"
                     /note="uncharacterized LOC139839926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839926"
     ncRNA           1..2278
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839926"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839926"
ORIGIN      
        1 cttcaaaccg tccatctctc catccctctt caaaattcct taaacctccg gagcttttcc
       61 atcgtcgatt atggcttaat gacggcgtat taggcgatgg cactaccacc aattaatcgg
      121 tgacgttttt ctccacacaa ccatacagat tttgtatatt aatgtcagat ccttcgaaat
      181 cgacggattc atctccggtt actttaatgt cgaggaagac gacggcttta acatgaaggt
      241 aataccattg gtgtggttcg gttagggttt gcagcgattc aaaggcattt acagattcat
      301 gttaaatcaa cggtgcccta aataattttc attataaata gacggtgaaa ggtaagggtt
      361 taatttgtgt ttatcatcat accctacatg cttttattca ttctaaattt ttatatctgt
      421 ttaattaaaa tcattgatgc aatttatttt tgttgttgtt ctttcatttc gtttttgatt
      481 gattgtggcg atattcttaa tttttgattt tcgattgctg aaatctaatg tttgtcaaag
      541 ttatttcttc tgcgattgct aaaaatccca acagaaaagc acaaagtgtt accaatttgg
      601 tgttctattc gtgttgtaga tgtatgatgc gatcgtttcc ttcagctgaa gagcatcaga
      661 agcgtcatga aaaaagttca tggatggatc actatctttg gctatacagt gttttttgtt
      721 cctacttttg ttattatatc ctttaagggt atcttgattt aagtagtttt caagatagct
      781 tatgagcttc aaaattgttt agagttttcg ctttggactt tgtgatacta aatttgtcta
      841 caaaatagaa caagaacacc tccctggatt agcctcagct agcattttca caagtatttg
      901 tagatttcaa atttctcata tctcacatag ttaaacttca aattttttaa caattcattg
      961 ctttaaaaaa taaaaataaa taacaactcc tttcatgata atgggtcttt ttttggtagg
     1021 aaaacaaaga gggccttgag ttgctaagac aaccattgaa caagctggtt acacgggaaa
     1081 gtctgtagat gtattagtgc taccttttca cgttggttat gagggggtct gggtgcatgt
     1141 gcttctgctg ttgttttaaa gaaaccagtc tcaaggtcta caatgttgta tctatgtgta
     1201 ccgaacgata gtgtctcatc aggtgtacgg ctgcttcctc atcaggttgg ttatgaggag
     1261 cttggctgcg tctgcctctg ttgttatttt taacaaacct atgcacgggc cagaaaatgt
     1321 tttaccgcac ttggttggca ctctgttgac tattttgtgg atgattcatt gctaaccaat
     1381 gcaacagcga acacacatag tatatgtgtt tttagcttcg tcatagctca agggtggtaa
     1441 aatgggcggt tggataatga ttaataacag gcacgtacta caaaccatta ttttagcaac
     1501 gaagtctcaa aaaaagggat gttgccattt tatgtcacag caggttctaa tgccatgcaa
     1561 gggacgtttt aattattgtt ttgacctcca gaaattgaaa gatgttgctt actaagatac
     1621 tgaatgagag gttctcatca tgattatatc ttgaaggtac aatatgttaa gaactaaatg
     1681 agaggttctc atcatgatta tatcttgaag gtacaatatg ttaagaacta aatgagaggt
     1741 tctgatcatg attatatctt gaagcatttt tatcaacggt gttgcaaact gatatgggtg
     1801 cactcaatag caattggaaa atcaaattac ttttgagatg ggaggaaagc tggcttcaag
     1861 cacttaaatt tcgggcattg aaggtaatat atgggtcatg gagaaggata agcatatgga
     1921 ttatttcggt ttggatcaga gtgttaaagg ctacaatttt cgaatttggt ttcatcatta
     1981 ttcttttgca aagcccgctc tctatggtca attttttatg catactgatg ggttgacttg
     2041 tgctgacatt ttaactttta aaagtcaaac ggtcaatgtt ttggggactt cttattctgt
     2101 ttttcttttg gtattatggt aaatgtactt ggtttatgtt acagggtgtg taagtattaa
     2161 ggattctgat ggtggtacaa gacatataat tataaaagat gctacttttt ggttggtcta
     2221 caatccatat gcaaattttt aagtttatgg gtttttgtat aacttatttg gcatttgt
//
LOCUS       XR_011757155            2305 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839926), transcript variant X5, ncRNA.
ACCESSION   XR_011757155
VERSION     XR_011757155.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2305
                     /gene="LOC139839926"
                     /note="uncharacterized LOC139839926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839926"
     ncRNA           1..2305
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839926"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139839926"
ORIGIN      
        1 cttcaaaccg tccatctctc catccctctt caaaattcct taaacctccg gagcttttcc
       61 atcgtcgatt atggcttaat gacggcgtat taggcgatgg cactaccacc aattaatcgg
      121 tgacgttttt ctccacacaa ccatacagat tttgtatatt aatgtcagat ccttcgaaat
      181 cgacggattc atctccggtt actttaatgt cgaggaagac gacggcttta acatgaaggt
      241 aataccattg gtgtggttcg gttagggttt gcagcgattc aaaggcattt acagattcat
      301 gttaaatcaa cggtgcccta aataattttc attataaata gacggtgaaa ggtaagggtt
      361 taatttgtgt ttatcatcat accctacatg cttttattca ttctaaattt ttatatctgt
      421 ttaattaaaa tcattgatgc aatttatttt tgttgttgtt ctttcatttc gtttttgatt
      481 gattgtggcg atattcttaa tttttgattt tcgattgctg aaatctaatg tttgtcaaag
      541 ttatttcttc tgcgattgct aaaaatccca acagaaaagc acaaagtgtt accaatttgg
      601 tgttctattc gtgttgtaga tgtatgatgc gatcgtttcc ttcagctgaa gagcatcaga
      661 agcgtcatga aaaaagttca tggatggatc actatctttg gctatacagt gttttttgtt
      721 cctacttttg ttattatatc ctttaagggt atcttgattt aagtagtttt caagatagct
      781 tatgagcttc aaaattgttt agagttttcg ctttggactt tgtgatacta aatttgtcta
      841 caaaatagaa caagaacacc tccctggatt agcctcagct agcattttca caagtatttg
      901 tagatttcaa atttctcata tctcacatag ttaaacttca aattttttaa caattcattg
      961 ctttaaaaaa taaaaataaa taacaactcc tttcatgata atgggtcttt ttttggtagg
     1021 aaaacaaaga gggccttgag ttgctaagac aaccattgaa caagctggtt acacgggaaa
     1081 gtctgtagat gtattagtgc taccttttca cgttggttat gagggggtct gggtgcatgt
     1141 gcttctgctg ttgttttaaa gaaaccagtc tcaaggtcta caatgttgta tctatgtgta
     1201 ccgaacgata gtgtctcatc aggtgtacgg ctgcttcctc atcaggttgg ttatgaggag
     1261 cttggctgcg tctgcctctg ttgttatttt taacaaacct atgcacgggc cagaaaatgt
     1321 tttaccgcac ttggttggca ctctgttgac tattttgtgg atgattcatt gctaaccaat
     1381 gcaacagcga acacacatag tatatgtgtt tttagcttcg tcatagctca agggtggtaa
     1441 aatgggcggt tggataatga ttaataacag gcacgtacta caaaccatta ttttagcaac
     1501 gaagtctcaa aaaaagggat gttgccattt tatgtcacag caggttctaa tgccatgcaa
     1561 gggacgtttt aattattgtt ttgacctcca gaaattgaaa gatgttgctt actaagatac
     1621 tgaatgagag gttctcatca tgattatatc ttgaaggtac aatatgttaa gaactaaatg
     1681 agaggttctc atcatgatta tatcttgaag gtacaatatg ttaagaacta aatgagaggt
     1741 tctgatcatg attatatctt gaagcatttt tatcaacggt gttgcaaact gatatgggtg
     1801 cactcaatag caattggaaa atcaaattac ttttgagatg ggaggaaagc tggcttcaag
     1861 cacttaaatt tcgggcattg aaggtgaaaa atgcaacatg ctttcaatct gtaatatatg
     1921 ggtcatggag aaggataagc atatggatta tttcggtttg gatcagagtg ttaaaggcta
     1981 caattttcga atttggtttc atcattattc ttttgcaaag cccgctctct atggtcaatt
     2041 ttttatgcat actgatgggt tgacttgtgc tgacatttta acttttaaaa gtcaaacggt
     2101 caatgttttg gggacttctt attctgtttt tcttttggta ttatggtaaa tgtacttggt
     2161 ttatgttaca gggtgtgtaa gtattaagga ttctgatggt ggtacaagac atataattat
     2221 aaaagatgct actttttggt tggtctacaa tccatatgca aatttttaag tttatgggtt
     2281 tttgtataac ttatttggca tttgt
//
LOCUS       XR_011757156            2287 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839926), transcript variant X6, ncRNA.
ACCESSION   XR_011757156
VERSION     XR_011757156.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2287
                     /gene="LOC139839926"
                     /note="uncharacterized LOC139839926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839926"
     ncRNA           1..2287
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839926"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139839926"
ORIGIN      
        1 cttcaaaccg tccatctctc catccctctt caaaattcct taaacctccg gagcttttcc
       61 atcgtcgatt atggcttaat gacggcgtat taggcgatgg cactaccacc aattaatcgg
      121 tgacgttttt ctccacacaa ccatacagat tttgtatatt aatgtcagat ccttcgaaat
      181 cgacggattc atctccggtt actttaatgt cgaggaagac gacggcttta acatgaaggt
      241 aataccattg gtgtggttcg gttagggttt gcagcgattc aaaggcattt acagattcat
      301 gttaaatcaa cggtgcccta aataattttc attataaata gacggtgaaa ggtaagggtt
      361 taatttgtgt ttatcatcat accctacatg cttttattca ttctaaattt ttatatctgt
      421 ttaattaaaa tcattgatgc aatttatttt tgttgttgtt ctttcatttc gtttttgatt
      481 gattgtggcg atattcttaa tttttgattt tcgattgctg aaatctaatg tttgtcaaag
      541 ttatttcttc tgcgattgct aaaaatccca acagaaaagc acaaagtgtt accaatttgg
      601 tgttctattc gtgttgtaga tgtatgatgc gatcgtttcc ttcagctgaa gagcatcaga
      661 agcgtcatga aaaaagttca tggatggatc actatctttg gctatacagt gttttttgtt
      721 cctacttttg ttattatatc ctttaagggt atcttgattt aagtagtttt caagatagct
      781 tatgagcttc aaaattgttt agagttttcg ctttggactt tgtgatacta aatttgtcta
      841 caaaatagaa caagaacacc tccctggatt agcctcagct agcattttca caagtatttg
      901 tagatttcaa atttctcata tctcacatag ttaaacttca aattttttaa caattcattg
      961 ctttaaaaaa taaaaataaa taacaactcc tttcatgata atgggtcttt ttttggtagg
     1021 aaaacaaaga gggccttgag ttgctaagac aaccattgaa caagctggtt acacgggaaa
     1081 gtctgtagat gtattagtgc taccttttca cgttggttat gagggggtct gggtgcatgt
     1141 gcttctgctg ttgttttaaa gaaaccagtc tcaaggtcta caatgttgta tctatgtgta
     1201 ccgaacgata gtgtctcatc aggtgtacgg ctgcttcctc atcaggttgg ttatgaggag
     1261 cttggctgcg tctgcctctg ttgttatttt taacaaacct atgcacgggc cagaaaatgt
     1321 tttaccgcac ttggttggca ctctgttgac tattttgtgg atgattcatt gctaaccaat
     1381 gcaacagcga acacacatag tatatgtgtt tttagcttcg tcatagctca agggtggtaa
     1441 aatgggcggt tggataatga ttaataacag gcacgtacta caaaccatta ttttagcaac
     1501 gaagtctcaa aaaaagggat gttgccattt tatgtcacag caggttctaa tgccatgcaa
     1561 gggacgtttt aattattgtt ttgacctcca gaaattgaaa gatgttgctt actaagatac
     1621 tgaatgagag gttctcatca tgattatatc ttgaagcatt tttatcaacg gtgttgcaaa
     1681 ctgatatggg tgcactcaat agcaattgga aaatcaaatt acttttgaga tgggaggaaa
     1741 gctggcttca agcacttaaa tttcgggcat tgaaggtgaa aaatgcaaca tgctttcaat
     1801 ctgtatgtat tagtcgcaca cgactgttga aagagttttt ctcggtttag aaaaattaac
     1861 gagtacctta cttctcatcc cgaatacatt aggtaatata tgggtcatgg agaaggataa
     1921 gcatatggat tatttcggtt tggatcagag tgttaaaggc tacaattttc gaatttggtt
     1981 tcatcattat tcttttgcaa agcccgctct ctatggtcaa ttttttatgc atactgatgg
     2041 gttgacttgt gctgacattt taacttttaa aagtcaaacg gtcaatgttt tggggacttc
     2101 ttattctgtt tttcttttgg tattatggta aatgtacttg gtttatgtta cagggtgtgt
     2161 aagtattaag gattctgatg gtggtacaag acatataatt ataaaagatg ctactttttg
     2221 gttggtctac aatccatatg caaattttta agtttatggg tttttgtata acttatttgg
     2281 catttgt
//
LOCUS       XR_011757157            2388 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839926), transcript variant X7, ncRNA.
ACCESSION   XR_011757157
VERSION     XR_011757157.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2388
                     /gene="LOC139839926"
                     /note="uncharacterized LOC139839926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839926"
     ncRNA           1..2388
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839926"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139839926"
ORIGIN      
        1 cttcaaaccg tccatctctc catccctctt caaaattcct taaacctccg gagcttttcc
       61 atcgtcgatt atggcttaat gacggcgtat taggcgatgg cactaccacc aattaatcgg
      121 tgacgttttt ctccacacaa ccatacagat tttgtatatt aatgtcagat ccttcgaaat
      181 cgacggattc atctccggtt actttaatgt cgaggaagac gacggcttta acatgaaggt
      241 aataccattg gtgtggttcg gttagggttt gcagcgattc aaaggcattt acagattcat
      301 gttaaatcaa cggtgcccta aataattttc attataaata gacggtgaaa ggtaagggtt
      361 taatttgtgt ttatcatcat accctacatg cttttattca ttctaaattt ttatatctgt
      421 ttaattaaaa tcattgatgc aatttatttt tgttgttgtt ctttcatttc gtttttgatt
      481 gattgtggcg atattcttaa tttttgattt tcgattgctg aaatctaatg tttgtcaaag
      541 ttatttcttc tgcgattgct aaaaatccca acagaaaagc acaaagtgtt accaatttgg
      601 tgttctattc gtgttgtaga tgtatgatgc gatcgtttcc ttcagctgaa gagcatcaga
      661 agcgtcatga aaaaagttca tggatggatc actatctttg gctatacagt gttttttgtt
      721 cctacttttg ttattatatc ctttaagggt atcttgattt aagtagtttt caagatagct
      781 tatgagcttc aaaattgttt agagttttcg ctttggactt tgtgatacta aatttgtcta
      841 caaaatagaa caagaacacc tccctggatt agcctcagct agcattttca caagtatttg
      901 tagatttcaa atttctcata tctcacatag ttaaacttca aattttttaa caattcattg
      961 ctttaaaaaa taaaaataaa taacaactcc tttcatgata atgggtcttt ttttggtagg
     1021 aaaacaaaga gggccttgag ttgctaagac aaccattgaa caagctggtt acacgggaaa
     1081 gatgtattag tgctaccttt tcacgttggt tatgaggggg tctgggtgca tgtgcttctg
     1141 ctgttgtttt aaagaaacca gtctcaaggt ctacaatgtt gtatctatgt gtaccgaacg
     1201 atagtgtctc atcaggtgta cggctgcttc ctcatcaggt tggttatgag gagcttggct
     1261 gcgtctgcct ctgttgttat ttttaacaaa cctatgcacg ggccagaaaa tgttttaccg
     1321 cacttggttg gcactctgtt gactattttg tggatgattc attgctaacc aatgcaacag
     1381 cgaacacaca tagtatatgt gtttttagct tcgtcatagc tcaagggtgg taaaatgggc
     1441 ggttggataa tgattaataa caggcacgta ctacaaacca ttattttagc aacgaagtct
     1501 caaaaaaagg gatgttgcca ttttatgtca cagcaggttc taatgccatg caagggacgt
     1561 tttaattatt gttttgacct ccagaaattg aaagatgttg cttactaaga tactgaatga
     1621 gaggttctca tcatgattat atcttgaagg tacaatatgt taagaactaa atgagaggtt
     1681 ctcatcatga ttatatcttg aaggtacaat atgttaagaa ctaaatgaga ggttctgatc
     1741 atgattatat cttgaagcat ttttatcaac ggtgttgcaa actgatatgg gtgcactcaa
     1801 tagcaattgg aaaatcaaat tacttttgag atgggaggaa agctggcttc aagcacttaa
     1861 atttcgggca ttgaaggtga aaaatgcaac atgctttcaa tctgtatgta ttagtcgcac
     1921 acgactgttg aaagagtttt tctcggttta gaaaaattaa cgagtacctt acttctcatc
     1981 ccgaatacat taggtaatat atgggtcatg gagaaggata agcatatgga ttatttcggt
     2041 ttggatcaga gtgttaaagg ctacaatttt cgaatttggt ttcatcatta ttcttttgca
     2101 aagcccgctc tctatggtca attttttatg catactgatg ggttgacttg tgctgacatt
     2161 ttaactttta aaagtcaaac ggtcaatgtt ttggggactt cttattctgt ttttcttttg
     2221 gtattatggt aaatgtactt ggtttatgtt acagggtgtg taagtattaa ggattctgat
     2281 ggtggtacaa gacatataat tataaaagat gctacttttt ggttggtcta caatccatat
     2341 gcaaattttt aagtttatgg gtttttgtat aacttatttg gcatttgt
//
LOCUS       XR_011757158            2262 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839926), transcript variant X8, ncRNA.
ACCESSION   XR_011757158
VERSION     XR_011757158.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2262
                     /gene="LOC139839926"
                     /note="uncharacterized LOC139839926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839926"
     ncRNA           1..2262
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839926"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139839926"
ORIGIN      
        1 cttcaaaccg tccatctctc catccctctt caaaattcct taaacctccg gagcttttcc
       61 atcgtcgatt atggcttaat gacggcgtat taggcgatgg cactaccacc aattaatcgg
      121 tgacgttttt ctccacacaa ccatacagat tttgtatatt aatgtcagat ccttcgaaat
      181 cgacggattc atctccggtt actttaatgt cgaggaagac gacggcttta acatgaaggt
      241 aataccattg gtgtggttcg gttagggttt gcagcgattc aaaggcattt acagattcat
      301 gttaaatcaa cggtgcccta aataattttc attataaata gacggtgaaa ggtaagggtt
      361 taatttgtgt ttatcatcat accctacatg cttttattca ttctaaattt ttatatctgt
      421 ttaattaaaa tcattgatgc aatttatttt tgttgttgtt ctttcatttc gtttttgatt
      481 gattgtggcg atattcttaa tttttgattt tcgattgctg aaatctaatg tttgtcaaag
      541 ttatttcttc tgcgattgct aaaaatccca acagaaaagc acaaagtgtt accaatttgg
      601 tgttctattc gtgttgtaga tgtatgatgc gatcgtttcc ttcagctgaa gagcatcaga
      661 agcgtcatga aaaaagttca tggatggatc actatctttg gctatacagt gttttttgtt
      721 cctacttttg ttattatatc ctttaagggt atcttgattt aagtagtttt caagatagct
      781 tatgagcttc aaaattgttt agagttttcg ctttggactt tgtgatacta aatttgtcta
      841 caaaatagaa caagaacacc tccctggatt agcctcagct agcattttca caagaaaaca
      901 aagagggcct tgagttgcta agacaaccat tgaacaagct ggttacacgg gaaagatgta
      961 ttagtgctac cttttcacgt tggttatgag ggggtctggg tgcatgtgct tctgctgttg
     1021 ttttaaagaa accagtctca aggtctacaa tgttgtatct atgtgtaccg aacgatagtg
     1081 tctcatcagg tgtacggctg cttcctcatc aggttggtta tgaggagctt ggctgcgtct
     1141 gcctctgttg ttatttttaa caaacctatg cacgggccag aaaatgtttt accgcacttg
     1201 gttggcactc tgttgactat tttgtggatg attcattgct aaccaatgca acagcgaaca
     1261 cacatagtat atgtgttttt agcttcgtca tagctcaagg gtggtaaaat gggcggttgg
     1321 ataatgatta ataacaggca cgtactacaa accattattt tagcaacgaa gtctcaaaaa
     1381 aagggatgtt gccattttat gtcacagcag gttctaatgc catgcaaggg acgttttaat
     1441 tattgttttg acctccagaa attgaaagat gttgcttact aagatactga atgagaggtt
     1501 ctcatcatga ttatatcttg aaggtacaat atgttaagaa ctaaatgaga ggttctcatc
     1561 atgattatat cttgaaggta caatatgtta agaactaaat gagaggttct gatcatgatt
     1621 atatcttgaa gcatttttat caacggtgtt gcaaactgat atgggtgcac tcaatagcaa
     1681 ttggaaaatc aaattacttt tgagatggga ggaaagctgg cttcaagcac ttaaatttcg
     1741 ggcattgaag gtgaaaaatg caacatgctt tcaatctgta tgtattagtc gcacacgact
     1801 gttgaaagag tttttctcgg tttagaaaaa ttaacgagta ccttacttct catcccgaat
     1861 acattaggta atatatgggt catggagaag gataagcata tggattattt cggtttggat
     1921 cagagtgtta aaggctacaa ttttcgaatt tggtttcatc attattcttt tgcaaagccc
     1981 gctctctatg gtcaattttt tatgcatact gatgggttga cttgtgctga cattttaact
     2041 tttaaaagtc aaacggtcaa tgttttgggg acttcttatt ctgtttttct tttggtatta
     2101 tggtaaatgt acttggttta tgttacaggg tgtgtaagta ttaaggattc tgatggtggt
     2161 acaagacata taattataaa agatgctact ttttggttgg tctacaatcc atatgcaaat
     2221 ttttaagttt atgggttttt gtataactta tttggcattt gt
//
LOCUS       XM_071830141            2468 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitochondrial intermediate
            peptidase, mitochondrial (LOC139839928), transcript variant X1,
            mRNA.
ACCESSION   XM_071830141
VERSION     XM_071830141.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2468
                     /gene="LOC139839928"
                     /note="mitochondrial intermediate peptidase,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139839928"
     CDS             77..2173
                     /gene="LOC139839928"
                     /codon_start=1
                     /product="mitochondrial intermediate peptidase,
                     mitochondrial isoform X1"
                     /protein_id="XP_071686242.1"
                     /db_xref="GeneID:139839928"
                     /translation="MAVLIRRAYLSLISTSQNRQIFSLAAHQLEETGLYGCNHLRNPK
                     GFQRIVDDAIERSNELVGYISSMPSSSEIINAMDEISNTVCQVVDSAELCRNTHPDRE
                     FVDEALKASIRINEYLHYLNTNLTLYDAVLKADKDNTLTNEEAKRVARDLRIDFEKGG
                     IHLCEEKKDRVSQLNVEIAKCCAQYNENIAKDPGHVDIYPSSRIPKNLQHLVKPVNRS
                     SSSGSRFNIREKGFRIVTEPSTVSAVLQWTSDDEVRKMTYIKSNSVPRANLAVLDNLI
                     AARHEISEIMGYRSYVDYALHSNMALSPDVVSSFLVELSKTVRSKAAEEFESICDFKR
                     RKNGQQHLALEPWDEAYFTRLMKSSAYNLDYSAITSYFSLSQCIEGLKVMVDSMFGMK
                     FVNVPIAPGESWHPDVLKMALHHPNEGDLGYIYLDLNSRVGKYPGCAHFAIRGGRRVS
                     KTEYQLPVIALVCNFSKSHRLNHSDVDTLFHEFGHALHSLLSRTDYQHFSGTRVAFDM
                     AETPSNLFEYYAWDYRVLKTFARHYSTGDIIPEKLVESMRGAKKMFAAMELQQQIFYA
                     LVDQTLYGSQTSSPIDTTSVVEDLRKQHTNWTHVEGTHWQTRFNHLLYYGAGYYSYLY
                     AKCFASTIWERVCKDDPLSLETGCAIRTKFLSHGGAKDPAQLLNDLAGDGITRYQNGG
                     VVPDITSLCNELNLRK"
     misc_feature    173..2095
                     /gene="LOC139839928"
                     /note="Peptidase M3 mitochondrial intermediate peptidase
                     (MIP); Region: M3A_MIP; cd06457"
                     /db_xref="CDD:341052"
     misc_feature    order(1385..1393,1517..1522,1529..1531,1604..1606,
                     1613..1615,1760..1762,1904..1909,1919..1924,1928..1933,
                     1940..1942)
                     /gene="LOC139839928"
                     /note="active site"
                     /db_xref="CDD:341052"
ORIGIN      
        1 gtaaaaaatt cactcgtgtt cgtatttatt cgatctccgg tgaccacggc ggcgccaccg
       61 ctaccataac ctcatcatgg ctgtgctcat ccgccgagcc tatttaagcc tcatctccac
      121 ctcccaaaac cgtcagatat tttcactcgc ggcgcatcaa ttggaagaga ctggtttata
      181 tggatgcaat catttgagaa accctaaagg ttttcaacgt attgtagatg acgctattga
      241 aaggtctaat gagcttgttg gatacatttc ttcaatgcct tcatcttctg aaattataaa
      301 tgccatggat gaaatatcaa acactgtatg tcaagttgtg gattctgctg aactttgtag
      361 aaatacacat ccagacaggg aatttgtgga cgaggcctta aaggcgtcaa ttaggattaa
      421 cgaatatcta cattatctca atacgaatct tactctttat gatgcggtgc tgaaagctga
      481 caaggataat actttgacaa atgaggaagc taaaagagtt gctcgtgacc ttcgcattga
      541 ttttgagaag ggtggaattc atctatgtga agaaaagaaa gatcgagtga gtcagctaaa
      601 tgttgaaatt gccaaatgct gtgcacagta caatgaaaat atagccaagg atccgggtca
      661 cgtggatata tatccatcat cacgtattcc aaagaacttg caacatcttg ttaaacctgt
      721 taatcgttct agttcatctg gttcaagatt taatatcaga gaaaaagggt tccgaatagt
      781 aaccgaaccg agcaccgtgt ctgcagtgtt gcaatggaca tctgatgatg aggtaagaaa
      841 aatgacatat atcaaaagta actctgtacc acgtgccaat cttgccgttc ttgataatct
      901 aattgctgca cgtcatgaaa tttccgagat aatggggtat agatcttatg ttgactatgc
      961 tttacattca aatatggctt tatcaccaga tgttgtatcg tcctttctag tggagctgag
     1021 taaaactgta cggtcaaaag cagctgagga atttgagtct atctgtgact tcaaaaggag
     1081 aaaaaatggc caacaacatc tagcattaga gccatgggat gaagcatact tcacaagatt
     1141 aatgaaatca tctgcttaca acttggacta ttcagctatc acttcttatt tttctttatc
     1201 acaatgtatc gagggtctta aagttatggt cgactcgatg ttcggcatga aatttgttaa
     1261 tgttcctatt gcacctggtg aatcatggca tccagatgtg ttgaagatgg cccttcatca
     1321 tcctaacgag ggtgatttgg ggtacatata ccttgatcta aattctagag taggaaaata
     1381 tcctggttgc gctcactttg ccatacgagg agggcggaga gtttcgaaaa cagaatacca
     1441 gctaccagtc atagctcttg tttgcaattt ttcaaaatcg cacaggctta accactccga
     1501 tgtagatacc ctttttcatg aatttgggca tgcacttcat tcattgcttt caagaacaga
     1561 ttatcaacat ttttcaggta cccgagtcgc ttttgacatg gctgaaactc cttcaaacct
     1621 atttgagtat tatgcatggg attatcgagt cctgaagaca tttgccaggc attattcaac
     1681 tggtgatata attcccgaga aacttgttga gtcaatgcga ggagccaaaa agatgtttgc
     1741 agcaatggaa ttacaacagc agatatttta tgcattggtc gaccaaacgc tatatggttc
     1801 tcagacatca tcaccaattg ataccacttc agttgttgag gatctgagaa aacaacatac
     1861 caattggaca catgtcgagg gtacacattg gcaaactcga ttcaaccacc tactatatta
     1921 tggtgcaggt tactatagct acttgtatgc aaaatgtttt gcatcgacta tttgggaaag
     1981 agtatgcaaa gacgacccat tatcattaga gacgggttgt gctattagaa caaaatttct
     2041 ttcgcatggt ggagccaaag atccggcaca gttacttaat gatcttgctg gagatggaat
     2101 tacaaggtat caaaatggag gtgtagttcc tgatattaca agcctttgta acgaattgaa
     2161 cttgaggaag tgatcataga aataataata cgatcatcaa acggtgcaag aaaagataac
     2221 aaagctaacc agttaaatgg ggttagtagg cgcaaacagt aatgtttttt attagagctg
     2281 caagaaaagc aagctcgatt cggggtgtca tatgtggcga ggttaatggg gtggctttta
     2341 gaactaataa ttcacttctg attctattga ttagatgtag tttaaggtta tatcaattgt
     2401 atcagttaat aaaacagcat gtgttgtgtt gtgcaagtgt gctgttacct tttttttatt
     2461 ttattttt
//
LOCUS       XM_071830142            2145 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitochondrial intermediate
            peptidase, mitochondrial (LOC139839928), transcript variant X2,
            mRNA.
ACCESSION   XM_071830142
VERSION     XM_071830142.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2145
                     /gene="LOC139839928"
                     /note="mitochondrial intermediate peptidase,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139839928"
     CDS             77..1999
                     /gene="LOC139839928"
                     /codon_start=1
                     /product="mitochondrial intermediate peptidase,
                     mitochondrial isoform X2"
                     /protein_id="XP_071686243.1"
                     /db_xref="GeneID:139839928"
                     /translation="MAVLIRRAYLSLISTSQNRQIFSLAAHQLEETGLYGCNHLRNPK
                     GFQRIVDDAIERSNELVGYISSMPSSSEIINAMDEISNTVCQVVDSAELCRNTHPDRE
                     FVDEALKASIRINEYLHYLNTNLTLYDAVLKADKDNTLTNEEAKRVARDLRIDFEKGG
                     IHLCEEKKDRVSQLNVEIAKCCAQYNENIAKDPGHVDIYPSSRIPKNLQHLVKPVNRS
                     SSSGSRFNIREKGFRIVTEPSTVSAVLQWTSDDEVRKMTYIKSNSVPRANLAVLDNLI
                     AARHEISEIMGYRSYVDYALHSNMALSPDVVSSFLVELSKTVRSKAAEEFESICDFKR
                     RKNGQQHLALEPWDEAYFTRLMKSSAYNLDYSAITSYFSLSQCIEGLKVMVDSMFGMK
                     FVNVPIAPGESWHPDVLKMALHHPNEGDLGYIYLDLNSRVGKYPGCAHFAIRGGRRVS
                     KTEYQLPVIALVCNFSKSHRLNHSDVDTLFHEFGHALHSLLSRTDYQHFSGTRVAFDM
                     AETPSNLFEYYAWDYRVLKTFARHYSTGDIIPEKLVESMRGAKKMFAAMELQQQIFYA
                     LVDQTLYGSQTSSPIDTTSVVEDLRKQHTNWTHVEGTHWQTRFNHLLYYGAATCMQNV
                     LHRLFGKEYAKTTHYH"
     misc_feature    173..1927
                     /gene="LOC139839928"
                     /note="Peptidase M3 mitochondrial intermediate peptidase
                     (MIP); Region: M3A_MIP; cd06457"
                     /db_xref="CDD:341052"
     misc_feature    order(1385..1393,1517..1522,1529..1531,1604..1606,
                     1613..1615,1760..1762,1904..1909,1919..1924)
                     /gene="LOC139839928"
                     /note="active site"
                     /db_xref="CDD:341052"
ORIGIN      
        1 gtaaaaaatt cactcgtgtt cgtatttatt cgatctccgg tgaccacggc ggcgccaccg
       61 ctaccataac ctcatcatgg ctgtgctcat ccgccgagcc tatttaagcc tcatctccac
      121 ctcccaaaac cgtcagatat tttcactcgc ggcgcatcaa ttggaagaga ctggtttata
      181 tggatgcaat catttgagaa accctaaagg ttttcaacgt attgtagatg acgctattga
      241 aaggtctaat gagcttgttg gatacatttc ttcaatgcct tcatcttctg aaattataaa
      301 tgccatggat gaaatatcaa acactgtatg tcaagttgtg gattctgctg aactttgtag
      361 aaatacacat ccagacaggg aatttgtgga cgaggcctta aaggcgtcaa ttaggattaa
      421 cgaatatcta cattatctca atacgaatct tactctttat gatgcggtgc tgaaagctga
      481 caaggataat actttgacaa atgaggaagc taaaagagtt gctcgtgacc ttcgcattga
      541 ttttgagaag ggtggaattc atctatgtga agaaaagaaa gatcgagtga gtcagctaaa
      601 tgttgaaatt gccaaatgct gtgcacagta caatgaaaat atagccaagg atccgggtca
      661 cgtggatata tatccatcat cacgtattcc aaagaacttg caacatcttg ttaaacctgt
      721 taatcgttct agttcatctg gttcaagatt taatatcaga gaaaaagggt tccgaatagt
      781 aaccgaaccg agcaccgtgt ctgcagtgtt gcaatggaca tctgatgatg aggtaagaaa
      841 aatgacatat atcaaaagta actctgtacc acgtgccaat cttgccgttc ttgataatct
      901 aattgctgca cgtcatgaaa tttccgagat aatggggtat agatcttatg ttgactatgc
      961 tttacattca aatatggctt tatcaccaga tgttgtatcg tcctttctag tggagctgag
     1021 taaaactgta cggtcaaaag cagctgagga atttgagtct atctgtgact tcaaaaggag
     1081 aaaaaatggc caacaacatc tagcattaga gccatgggat gaagcatact tcacaagatt
     1141 aatgaaatca tctgcttaca acttggacta ttcagctatc acttcttatt tttctttatc
     1201 acaatgtatc gagggtctta aagttatggt cgactcgatg ttcggcatga aatttgttaa
     1261 tgttcctatt gcacctggtg aatcatggca tccagatgtg ttgaagatgg cccttcatca
     1321 tcctaacgag ggtgatttgg ggtacatata ccttgatcta aattctagag taggaaaata
     1381 tcctggttgc gctcactttg ccatacgagg agggcggaga gtttcgaaaa cagaatacca
     1441 gctaccagtc atagctcttg tttgcaattt ttcaaaatcg cacaggctta accactccga
     1501 tgtagatacc ctttttcatg aatttgggca tgcacttcat tcattgcttt caagaacaga
     1561 ttatcaacat ttttcaggta cccgagtcgc ttttgacatg gctgaaactc cttcaaacct
     1621 atttgagtat tatgcatggg attatcgagt cctgaagaca tttgccaggc attattcaac
     1681 tggtgatata attcccgaga aacttgttga gtcaatgcga ggagccaaaa agatgtttgc
     1741 agcaatggaa ttacaacagc agatatttta tgcattggtc gaccaaacgc tatatggttc
     1801 tcagacatca tcaccaattg ataccacttc agttgttgag gatctgagaa aacaacatac
     1861 caattggaca catgtcgagg gtacacattg gcaaactcga ttcaaccacc tactatatta
     1921 tggtgcagct acttgtatgc aaaatgtttt gcatcgacta tttgggaaag agtatgcaaa
     1981 gacgacccat tatcattaga gacgggttgt gctattagaa caaaatttct ttcgcatggt
     2041 ggagccaaag atccggcaca gttacttaat gatcttgctg gagatggaat tacaaggtat
     2101 caaaatggag gtgtagttcc tgatattaca agcctttgta acgaa
//
LOCUS       XM_071830143            1031 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            ZAT10-like (LOC139839929), mRNA.
ACCESSION   XM_071830143
VERSION     XM_071830143.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1031
                     /gene="LOC139839929"
                     /note="zinc finger protein ZAT10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139839929"
     CDS             79..840
                     /gene="LOC139839929"
                     /codon_start=1
                     /product="zinc finger protein ZAT10-like"
                     /protein_id="XP_071686244.1"
                     /db_xref="GeneID:139839929"
                     /translation="MAVEALNSPTTPPTSLFRQDSGNHFNYLESWTKGKRSKRPRVDQ
                     QPPSEEEYLALCLMLLARGTRSESVSPQLHTPAAGPTTTRQQPTFIHKCSVCNKVFGS
                     YQALGGHKASHRKNTQVFAGTGVDQTEEAVATVATTTATASSVSGTHGGSGRSHECNI
                     CHRSFPTGQALGGHKRRHYDGVIGSGAGGSRTGSGITSSEGVGSTTNSQRGFDLNIPA
                     MPEFVSGFNEEEVESPHPAKKSRLFPVENHQIATR"
     misc_feature    346..423
                     /gene="LOC139839929"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
     misc_feature    544..618
                     /gene="LOC139839929"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
     polyA_site      1031
                     /gene="LOC139839929"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttctctataa aaaatcattt tcaacttcaa tcaaataaac caaaaataaa attaaaaaaa
       61 aaaaaaaaaa aatctgtaat ggcagttgaa gctttgaatt caccaacaac accacccacg
      121 tctttattca gacaagattc cggcaaccat ttcaactatt tagaatcatg gactaaaggt
      181 aaaagatcca aaaggccacg tgtcgatcaa caaccgccct cagaagaaga gtatctcgct
      241 ttatgtctta tgttactcgc tcgtggcacc cgttctgaat cagtttcacc gcaacttcac
      301 actccggcag cgggacccac tacaacccgg caacaaccaa cttttatcca caaatgttct
      361 gtctgtaata aagtttttgg ttcctaccaa gctttaggtg gacataaagc tagtcaccgg
      421 aaaaacaccc aagtttttgc cggaaccgga gttgatcaga ctgaagaagc ggttgcaacc
      481 gtcgccacca ccactgccac cgcttcgtcg gtgagtggga ctcatggtgg tagtggaagg
      541 agccatgagt gtaatatttg tcaccggtcg tttcccaccg gacaggcgtt gggtggacat
      601 aaacgccgtc actatgacgg tgttattggt agcggagcag gaggtagccg taccggtagc
      661 ggtattacgt catcggaagg tgttgggtcc accaccaata gtcaacgcgg gtttgacttg
      721 aacattccgg cgatgccgga atttgtttcc ggattcaacg aggaggaggt tgaaagccct
      781 catccggcga aaaaatctcg gctttttccg gtggaaaacc accagatcgc tacccgttaa
      841 tcaaatcgat ttaattattg ggttttgata gaacagggat agggaattat gagttttgat
      901 tttaggaaat ttatatttgt gattatgata tactttctca tacatgaaat catttcattt
      961 tttgtaaata cggttagtag taattgattg tatttttgat gaatttaatt ggattattta
     1021 tttttattta a
//
LOCUS       XM_071830144             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-responsive
            transcription factor ERF104-like (LOC139839930), mRNA.
ACCESSION   XM_071830144
VERSION     XM_071830144.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139839930"
                     /note="ethylene-responsive transcription factor
                     ERF104-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139839930"
     CDS             1..795
                     /gene="LOC139839930"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     ERF104-like"
                     /protein_id="XP_071686245.1"
                     /db_xref="GeneID:139839930"
                     /translation="MSESLSDSDSAMLDFVRQCLLEDPDITSPFPATIASSDEPHFSR
                     SSSFTSPFSFDNSIETSFCVDTFVDSLTSVISTTSSNLHENLLTSSCSESTQSPISKT
                     YTRTQSQSSINHTPNVFQVTNWVDGPSMIHTPSSPSPNNNIIEEIPQFKVDFGKAKKV
                     KKNDQRNKDWRRFRGVRRRPWGKFAAEIKNPNKKGARIWLGTFSTPEEAALAYDQAAF
                     KIRGSRAMVNFPQLIGVKTINPLCSLSEVDLECKLKNKGFTPKTEN"
     misc_feature    538..696
                     /gene="LOC139839930"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
ORIGIN      
        1 atgtctgaaa gcctctcaga ttctgattca gccatgctcg atttcgttcg acaatgcctt
       61 ctcgaagatc ctgatatcac aagtcctttt ccggccacaa ttgcatcatc ggatgaacca
      121 catttcagcc ggagttcaag tttcacaagt ccattttcat tcgataattc catcgaaaca
      181 tcattttgcg tcgatacgtt tgttgattca cttacttctg tcataagtac tacttcatcc
      241 aatttgcatg aaaatttact tacgagttca tgcagtgagt ccactcaaag cccaattagt
      301 aaaacctaca ctcgaactca atctcaatct tcaataaatc acactccaaa tgtctttcaa
      361 gttactaatt gggttgatgg gccatcaatg atccatactc caagttcacc ttcacctaat
      421 aataatatta ttgaagaaat accacagttt aaagttgatt ttggaaaagc aaaaaaggtg
      481 aagaaaaatg atcaaagaaa taaagattgg agaaggttta gaggcgtaag aagacgtcca
      541 tggggaaaat ttgcggcgga aataaagaac cctaacaaaa aaggtgcacg aatttggctt
      601 ggaacattct caacgcctga agaagccgcc ttggcttatg accaagcggc tttcaagatt
      661 cgtggttcac gagctatggt taactttccg caattgattg gggtaaaaac gataaatccg
      721 ttatgctctt tgtctgaagt agacttggaa tgtaagttaa aaaataaagg gttcactcct
      781 aaaactgaaa actag
//
LOCUS       XM_071830146             834 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein eL15-like (LOC139839931), mRNA.
ACCESSION   XM_071830146
VERSION     XM_071830146.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..834
                     /gene="LOC139839931"
                     /note="large ribosomal subunit protein eL15-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139839931"
     CDS             102..716
                     /gene="LOC139839931"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL15-like"
                     /protein_id="XP_071686247.1"
                     /db_xref="GeneID:139839931"
                     /translation="MGAYTYVSELWRKKQSDVMRFMQRVRCWEYRQLPSIVRVTHPTR
                     PDKARRMGYKAKQGYVIYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVA
                     EERAGRKLGGLKVLNSYWLNEDSTYKYFEVILVDPAHTAIRNDPRINWICNPVHKHRE
                     LRGLTSAGKKYRGLRGKGHLNHKQRPSRRATWKRNNTLSLRRYR"
     misc_feature    102..713
                     /gene="LOC139839931"
                     /note="60S ribosomal protein L15; Provisional; Region:
                     PTZ00026"
                     /db_xref="CDD:185402"
     polyA_site      834
                     /gene="LOC139839931"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaaacccta atccaaaaac gttacatcat tattcccaac tgaaatatca gcagccgtaa
       61 atcgatttgc aggtagatcg tagccggatc agagttcaac gatgggtgcg tatacgtatg
      121 tatcggaact atggaggaag aaacaatcag atgtgatgag attcatgcag agagttaggt
      181 gctgggagta ccgtcagctt ccctccattg ttcgggtcac tcatcctacc cgacccgata
      241 aggcccgtcg tatgggctac aaagccaaac aggggtatgt gatttaccga gtacgtgtga
      301 ggcgtggtgg aaggaagagg ccagtaccta aaggtattgt gtatggaaag cctaccaacc
      361 agggtgtcac ccaactcaag tttcaaagga gcaagaggtc cgttgctgag gaacgagctg
      421 ggaggaaatt gggcgggctt aaggttctta actcttactg gctcaatgag gattcaactt
      481 acaagtactt tgaggtgata ttggtggacc ctgcacatac tgcaatccgc aacgacccaa
      541 ggatcaactg gatctgcaac ccagtacaca aacacagaga gcttagagga ctcacatctg
      601 ctggtaaaaa gtacagggga cttcgtggaa agggacactt gaaccataag cagcgtccgt
      661 caagaagggc tacctggaag agaaacaata ctttgtccct tcgccgttac cgttgatcac
      721 ttcatctgca ttatctttgt tttctttttc actggcttgt actcgtatat tttgttttac
      781 tgatattatt ttttgctgtt tgagaattga ggatatgaat gctttttaaa tcaa
//
LOCUS       XM_071830147             819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839932), transcript variant X1, mRNA.
ACCESSION   XM_071830147
VERSION     XM_071830147.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..819
                     /gene="LOC139839932"
                     /note="uncharacterized LOC139839932; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839932"
     CDS             68..622
                     /gene="LOC139839932"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686248.1"
                     /db_xref="GeneID:139839932"
                     /translation="MATPHSDIHIAHSEHQSKGQDIEELVSEFLAPRQAQAEALDQFL
                     VELLAESRAQTQAMIKAITEVQAHIEARAQVLAQAQVLAQAQQKSQSKASALLSKNII
                     TMVNILVFLACGSLVYVSRSRFSADSPFFVKLMFFIHDCCVICVGVCHYIVVSEITFP
                     DDVFDGIKSRFDMLKKGRLSKQGL"
     polyA_site      819
                     /gene="LOC139839932"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cagccaaaaa aaaaaaaaaa aaattcttaa tacacattct acgcatctct aaaccctagc
       61 aatagcaatg gcgacaccac acagtgacat acatatagcc cattctgaac atcaatctaa
      121 aggccaagac attgaggaac ttgtgtcaga attcctagcc cccagacaag cccaagccga
      181 agccctggat caattcttgg ttgagttgtt ggccgaatcc agagctcaaa ctcaagccat
      241 gataaaagct ataacagagg tacaggccca cattgaggct cgggctcaag tcctggctca
      301 ggcccaagtt ctggctcagg cccaacagaa gtcccagtcc aaagcaagtg cccttttgag
      361 caagaacatt attacgatgg tgaatatctt agtgtttctt gcttgtggta gtcttgtgta
      421 cgtgtcccgt tctcgtttta gtgcagattc acctttcttt gtcaagctga tgtttttcat
      481 ccatgattgt tgtgtgatct gtgtcggggt ttgccattat attgtggtat ctgaaattac
      541 attccctgat gatgtatttg atggaattaa gtctcgattt gatatgttga aaaagggtcg
      601 tctaagcaag caagggttat gattgctgag gatggttatc gccttataga tgaagtttat
      661 tagaatatga agctttacat caaagtacgt taagtttatg tattgtacat cttattattt
      721 cggtgtctca tttttatagt aatatatttt tgtaactaaa gataacttta gagagcacta
      781 attattatga tttttatttg atgtggtcca ttgacaacc
//
LOCUS       XM_071830148             714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839932), transcript variant X2, mRNA.
ACCESSION   XM_071830148
VERSION     XM_071830148.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139839932"
                     /note="uncharacterized LOC139839932; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839932"
     CDS             14..517
                     /gene="LOC139839932"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686249.1"
                     /db_xref="GeneID:139839932"
                     /translation="MATPHRELVSEFLAPRQAQAEALDQFLVELLAESRAQTQAMIKA
                     ITEVQAHIEARAQVLAQAQVLAQAQQKSQSKASALLSKNIITMVNILVFLACGSLVYV
                     SRSRFSADSPFFVKLMFFIHDCCVICVGVCHYIVVSEITFPDDVFDGIKSRFDMLKKG
                     RLSKQGL"
     polyA_site      714
                     /gene="LOC139839932"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cctagcaata gcaatggcga caccacacag ggaacttgtg tcagaattcc tagcccccag
       61 acaagcccaa gccgaagccc tggatcaatt cttggttgag ttgttggccg aatccagagc
      121 tcaaactcaa gccatgataa aagctataac agaggtacag gcccacattg aggctcgggc
      181 tcaagtcctg gctcaggccc aagttctggc tcaggcccaa cagaagtccc agtccaaagc
      241 aagtgccctt ttgagcaaga acattattac gatggtgaat atcttagtgt ttcttgcttg
      301 tggtagtctt gtgtacgtgt cccgttctcg ttttagtgca gattcacctt tctttgtcaa
      361 gctgatgttt ttcatccatg attgttgtgt gatctgtgtc ggggtttgcc attatattgt
      421 ggtatctgaa attacattcc ctgatgatgt atttgatgga attaagtctc gatttgatat
      481 gttgaaaaag ggtcgtctaa gcaagcaagg gttatgattg ctgaggatgg ttatcgcctt
      541 atagatgaag tttattagaa tatgaagctt tacatcaaag tacgttaagt ttatgtattg
      601 tacatcttat tatttcggtg tctcattttt atagtaatat atttttgtaa ctaaagataa
      661 ctttagagag cactaattat tatgattttt atttgatgtg gtccattgac aacc
//
LOCUS       XR_011757159            2009 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839933), transcript variant X1, ncRNA.
ACCESSION   XR_011757159
VERSION     XR_011757159.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2009
                     /gene="LOC139839933"
                     /note="uncharacterized LOC139839933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839933"
     ncRNA           1..2009
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839933"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839933"
ORIGIN      
        1 ggctgaaata tcaccgccca atttggatat atgttaacga cctgtgaagt tcaactgttc
       61 aagatagcct ttcttgaatt ctagcatgaa ttcgaggatc atgtatttcg agctcgagtc
      121 caaatttaag tcaaatttga ttgtaggaac ctggggtttg agcaaacatc gcatgattcc
      181 acgtagcttc acttgccgtt ggaatgttta aagattaatg tcattaaatc ccactttttt
      241 ggtattggtg tcgaggattc ggaagtcgtg actctcgcgg ctgctgcagg gactcaggtt
      301 ggtgttttcc caactaagta cctaggtatt ccgattggat ctaatatgaa cttaacggct
      361 aattgggact cgttacttga taagtttcgt accaaacttt cctcgtggaa ggcatgttta
      421 ctttcatcgg gtggaagatt aacccttatt aaatccgttt tgggtagcct tggcatttat
      481 ctcttgtcat tgtatagatg tccggtttcg gttttaaagc ggcttgaatc tatcagggcg
      541 agattctttt gggccggaag tgacttcgct aaaaagatgt cttgggttaa atgggacaaa
      601 gttattactt catttgataa aggtggcctt aatgtgggaa gtctaaaggc ttttaacatt
      661 gccttggtta ataaatggag gtggaggtat ttatccaacc cggatgagta ttgggtttcg
      721 atcatcaaat ctatacatgg taacattttt gagaagtctt cgggttcctg ttctagtaca
      781 tggaataata ttgttggtac atgttctaaa gcaattagtg atggtcttct gccttcgaat
      841 ttatttcgaa tggatattgg tgatggtaga aattctcgtt tttggcatga cctttggtgt
      901 ggtaactcta ctttagcgtg tcggtacaat cggttatttt gcttgtatgt taacaaagat
      961 gacatgattg ctgataaatg ggttgatggt gaatggcaat gggtgtggaa taggcagaat
     1021 ttgggaagtc ggaacgacca attgcttaca ttgcttcgtg aggatattag tttctgtttt
     1081 tttatcggat cgaactgata gatggtcctg ttcgattact tctgatggtt tatactccgt
     1141 taaagcagcg agggaggcta ttgatcgggt gacgctttca tcttctaatt ttaaaatcgt
     1201 ttggtacaaa ttcgtcccga ggaaggttaa cgtcttcatt tggcggttaa ggttggattc
     1261 tcttcccgtt cggtggaacc tctccgcgaa aggtatagag attcccacta ttgtttgtcc
     1321 ggtttgtaac aatggggtcg agtctcaaga tcatctattc ttcgagtgtc atttggcttc
     1381 ggatctatgg cacaagatta agatttggtt ggatttggtt atgcctgcgt tctcttcttg
     1441 ggacacgttt attgtttggc ttgagggtgt ccgtctctca caaaagaaca aggatcagat
     1501 cgtggctatt atggttactt ttttgtgggc tatttggcgg tatcgtaatg gagttgtttt
     1561 taatgattcg ttttgtaaca ttagcaatct tttcgatgta attagatttc tttcctttcg
     1621 ttggttaaaa catagaggtt atctagtttc aaattgaaac ttatggcttt ctatgccgtt
     1681 gtaattctcc tttagcgtct tgctagggag cgttttattt atatatcttt atttggccgt
     1741 aaaaaaaaaa ggaagaagat gaagaaactg agaggtttaa attagggtat gatatttggg
     1801 taagataaat gcggagatta ggaagttaaa aggagaattg atatgtaaaa tgatgaaaat
     1861 actctcatgt acatggcaca tgcccgaagt tgacggagag aatcaacgaa cgtcacatgg
     1921 atggactatc cacgaacgaa aatgcaaact tttggaatat ttagttgaaa aaatcaagtt
     1981 tgaactatct gtgtattttt tatcagacc
//
LOCUS       XR_011757160             340 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839933), transcript variant X2, ncRNA.
ACCESSION   XR_011757160
VERSION     XR_011757160.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..340
                     /gene="LOC139839933"
                     /note="uncharacterized LOC139839933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839933"
     ncRNA           1..340
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839933"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839933"
ORIGIN      
        1 ggctgaaata tcaccgccca atttggatat atgttaacga cctgtgaagt tcaactgttc
       61 aagatagcct ttcttgaatt ctagcatgaa ttcgaggatc atgtatttcg agctcgagtc
      121 caaatttaag tcaaatttga ttgtaggaac ctggggtttg agcaaacatc gcatgattcc
      181 acgtagcttc acttgccgtt ggaatgtact taacttttgg aagcactttc aggtcgggca
      241 tcgtggaagt tttaaaaatg tcttttgtta aatttagtat tgataggcta gattatgatg
      301 tatttgtatt tgtactatat ttgtacttgt attttgtaac
//
LOCUS       XR_011757161             336 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839933), transcript variant X3, ncRNA.
ACCESSION   XR_011757161
VERSION     XR_011757161.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..336
                     /gene="LOC139839933"
                     /note="uncharacterized LOC139839933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839933"
     ncRNA           1..336
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839933"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139839933"
ORIGIN      
        1 ggctgaaata tcaccgccca atttggatat atgttaacga cctgtgaagt tcaactgttc
       61 aagatagcct ttcttgaatt ctagcatgaa ttcgaggatc atgtatttcg agctcgagtc
      121 caaatttaag tcaaatttga ttgtaggaac ctggggtttg agcaaacatc gcatgattcc
      181 acgtagcttc acttgccgtt ggaatgaaat ggcaccgact actcgacaca ccgtgaatat
      241 gaatgaagag gaattccgta cttttctagc ttcaaacata gccgcagtac aggctgcgct
      301 acataccaac aataaccttg gatctagccg tacagg
//
LOCUS       XR_011757162             256 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839933), transcript variant X4, ncRNA.
ACCESSION   XR_011757162
VERSION     XR_011757162.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..256
                     /gene="LOC139839933"
                     /note="uncharacterized LOC139839933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839933"
     ncRNA           1..256
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839933"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139839933"
ORIGIN      
        1 ggctgaaata tcaccgccca atttggatat atgttaacga cctgtgaagt tcaactgttc
       61 aagatagcct ttcttgaatt ctagcatgaa ttcgaggatc atgtatttcg agctcgagtc
      121 caaatttaag tcaaatttga ttgtaggaac ctggggtttg agcaaacatc gcatgattcc
      181 acgtagcttc acttgccgtt ggaatgtctc aagcccggaa caccgaacac aatctgacca
      241 attaccgtga acgctt
//
LOCUS       XM_071830149            2282 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative receptor-like
            protein kinase At1g80870 (LOC139839934), mRNA.
ACCESSION   XM_071830149
VERSION     XM_071830149.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2282
                     /gene="LOC139839934"
                     /note="putative receptor-like protein kinase At1g80870;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139839934"
     CDS             154..2082
                     /gene="LOC139839934"
                     /codon_start=1
                     /product="putative receptor-like protein kinase At1g80870"
                     /protein_id="XP_071686250.1"
                     /db_xref="GeneID:139839934"
                     /translation="MPSRQLSSFTHQQSTKHKTTFIFIIITIFSSLIVIFGIIYLIYY
                     VWYSLIHRTRTSPLDSCPIFLKLRRFTYKELDSATNNFHPDNYIGKGGSGTVYRGILK
                     TGKLVAVKLLDNDSVEAEREFQNELRILGGLESQFVVSLLGYCVHKRKRLVVYEYMPN
                     KSLQELLFSVRGLEWERRFEIILDVSRALEFLHCECDPPVIHGDIKPSNVLLDAEFRA
                     KVSDFGLSRLKIESEFEADLFSQDLSGALVAGAIESPAIGTPAEMSSNNEVDFALALQ
                     ASSSSTPINSKVVCKKLGLGFGTEKGKDISDDWENDKFSGYDDDLSRNFDGDRVRERN
                     LIGSDDHKVGKKQWGKDWWWKQEGSGELCSKDYVREWIGSQICPSANADWDDDKNSQK
                     PDLSNNVNENVNKVSDERSEWKQHRKMQEWWKEEHLDELAKKKVETKGKRRFKIKIFK
                     RRRKVKHEDHKTEFSFRKNSKENVEMNGGDVFSRELSSTTSMRGTLCYVAPEYGACGY
                     LMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRQLAHGGDLLELVDER
                     LKNEYNKAQASLCVNLALACLQKMPELRPDIGDIVKVLKGEMELPVVPFEFSPSPPSK
                     LIGRSGSRSKRKNKSNVD"
     misc_feature    415..>837
                     /gene="LOC139839934"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(415..426,433..435,439..441,475..477,481..483,
                     568..570,616..627,763..765,775..780,784..786,814..819)
                     /gene="LOC139839934"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    <1594..1971
                     /gene="LOC139839934"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 ccccttttaa tctcccccac accaatccac ctttttcttc aatccaattt aaattaaatt
       61 aaattaaact tctcatcatt ttattccata aataaatttc caaatgataa acacctacaa
      121 atccttattc acacaaaatc tgcccaacaa aagatgcctt caagacaact ttcttctttc
      181 actcatcaac aatcaacaaa gcataaaaca actttcattt tcattataat cacaatcttc
      241 tcttcactaa ttgtaatttt tggtatcatt tacttaattt actacgtatg gtactcgtta
      301 atccaccgaa cacgtaccag tccactcgat tcgtgtccaa ttttcttaaa actacgtcgt
      361 tttacttata aagaactcga ctccgctact aataacttcc atcccgataa ttacatcggt
      421 aaaggcggtt ccggtaccgt ctaccgcggt attctaaaaa ccggtaaact cgttgcggtt
      481 aaactactcg ataacgattc ggtagaagcc gaacgtgaat tccaaaacga actgcgaatt
      541 ctcggcggat tggaatcgca attcgtcgtt tcgttgctag gttattgtgt tcataaacgt
      601 aaacgtttgg ttgtttatga gtacatgcct aataaaagct tacaggaatt gctgttttcg
      661 gttcgtggat tggaatggga gagacgattc gagatcattc tagatgtttc tagagcactc
      721 gagtttttac attgcgagtg tgatcctccc gtaattcacg gagatataaa acctagtaat
      781 gttttactcg atgccgaatt cagagcgaaa gtttcggatt tcggactatc cagattgaaa
      841 attgaatccg aatttgaagc ggatctgttc agtcaggatt tatctggagc tctggtagcg
      901 ggtgcgattg aatcacctgc tattgggact ccagctgaaa tgagtagtaa taatgaggta
      961 gattttgcac ttgctttaca agcttcatca tcttcaactc ctattaatag taaggttgtg
     1021 tgtaaaaaat tagggttagg gtttgggact gaaaaaggga aggatatttc agacgattgg
     1081 gagaacgata agtttagcgg ttatgatgat gatttaagtc gaaattttga tggtgatcgt
     1141 gttagagaac gaaatttgat tggttctgat gatcataaag ttggtaagaa acaatggggg
     1201 aaagattggt ggtggaagca agaagggagt ggtgagcttt gttcgaaaga ttacgttcgg
     1261 gaatggatcg ggagtcagat ttgtccatcg gcgaatgcag attgggacga cgataagaac
     1321 tctcaaaaac ccgatttgag taataatgtg aacgagaacg tgaataaagt gtccgatgaa
     1381 cgaagcgagt ggaagcaaca tcggaaaatg caggaatggt ggaaagaaga acacctagac
     1441 gagcttgcga aaaagaaagt tgaaacgaaa ggtaaacgga gattcaagat caagatcttt
     1501 aaaagaagac gaaaagtgaa gcacgaggat cacaaaacag agtttagttt tcgaaagaat
     1561 tcaaaagaaa acgtcgaaat gaatgggggt gacgttttta gtcgggagtt aagtagtacg
     1621 acgagtatga gggggacact atgttatgta gcacccgagt acggtgcttg tggttactta
     1681 atggaaaagg cggatattta cagttttggt gttttgattc ttgttattgt ttcgggtcga
     1741 agaccattac atgttttggc ttcgcctatg aagcttgaaa aggcgaattt gataagttgg
     1801 tgtcgacaat tggctcatgg cggcgatttg ttggaactcg ttgatgaaag attgaaaaac
     1861 gagtacaata aagcgcaagc gagtttgtgt gtgaatttgg ctcttgcttg tttacaaaag
     1921 atgccggagt tgaggccgga tatcggggat attgttaagg ttttgaaagg ggaaatggaa
     1981 ctaccggttg ttccgttcga gttttctccc tctcctcctt cgaaattgat cgggagatcg
     2041 ggatcgagat cgaaaaggaa gaacaagagt aatgtagatt gaaatttgtt tagattttaa
     2101 gtgttgatat taagttttat atctatctaa cggataagtt acaaaagaaa tgttgataga
     2161 tggattaaaa ttgtatttgt atatgattat ttattagtta tgagtttttt tgacagatta
     2221 tatgctcacg gggatcattt ttctgtatac ctattgttta ttttgttttg tcttttggtt
     2281 tt
//
LOCUS       XM_071830150            1782 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-glucosidase 44-like
            (LOC139839935), mRNA.
ACCESSION   XM_071830150
VERSION     XM_071830150.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1782
                     /gene="LOC139839935"
                     /note="beta-glucosidase 44-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139839935"
     CDS             27..1514
                     /gene="LOC139839935"
                     /codon_start=1
                     /product="beta-glucosidase 44-like"
                     /protein_id="XP_071686251.1"
                     /db_xref="GeneID:139839935"
                     /translation="MIRPLAVLVSLLVFSAVVGATQVTRKSFPNGFLFGTATSAYQVE
                     GMASKGGRGPSIWDEFIKTPGLEPNNATGEVTVDQYHRYKEDIDMMANLNFDAYRFSI
                     SWTRIFPKGTGKVNKKGVAYYNRLINYMLKKGITPYANLNHYDLPLALEEKYLGWLNP
                     QVVEDFANYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGYFAPGRCSKAYGNCTAG
                     NSATEPYIVAHNLILSHAAAVQRYRQKYQETQKGRIGILLDFVWYEPLSRSKADNLAA
                     QRARDFHVGWFLHPIVYGEYPKTMQNIVKNRLPKFSKEEVKMVKGSFDLIGINQYTTY
                     YMYDPHKSPPKDLGYQMDWNVGFAYERKGVPIGPRAYSYWLYNVPWGLHKAIMYIKER
                     YGNPTMILAENGMDDPGNITLAKGLHDTTRINYYKGYLAALKQTVDEGANVIGYFAWS
                     LLDNFEWRLGYTSRFGIVYVDFKTLKRYPKMSAYWFKKILRRSKR"
     misc_feature    96..1499
                     /gene="LOC139839935"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     Region: BglB; COG2723"
                     /db_xref="CDD:442035"
ORIGIN      
        1 cttaatttcc aaggacacac ataaacatga taaggccatt agccgtacta gtttcgttgc
       61 tagtcttttc ggcggtcgtg ggtgcgaccc aagtgacccg aaagagcttt ccgaatgggt
      121 tcctatttgg aactgcaacc tccgcctatc aagtagaagg catggcctct aaaggtggac
      181 gtggacccag catttgggat gaattcatca agactcctgg acttgagcca aacaatgcaa
      241 cgggagaagt tacagtggat caatatcatc gatacaagga agatatcgat atgatggcta
      301 acctcaactt tgatgcatat cgattctcca tatcatggac tagaatattt ccaaagggga
      361 ccggaaaagt gaacaaaaaa ggagttgctt attataaccg tttaatcaac tatatgctta
      421 agaaaggcat caccccatat gctaatctca atcactacga tcttccatta gcccttgaag
      481 aaaagtatct tggatggttg aaccctcaag ttgtggaaga ttttgctaat tacgcggact
      541 tttgtttcaa gacatttgga gacagagtta aaaattggat gacgtttaac gagcctagag
      601 tggtggccgc ccttggttac gacaatggct atttcgctcc aggaaggtgc tctaaagcgt
      661 acgggaattg tacagctggc aattctgcaa cagaacctta cattgttgcc cataatttga
      721 tcttaagtca tgcagctgca gttcaacgat accgccaaaa gtatcaagaa acacaaaagg
      781 gacgcattgg tatattattg gattttgttt ggtacgaacc actctctaga tcgaaagccg
      841 acaatttggc tgctcaaaga gcacgtgact ttcatgttgg atggtttttg catccaattg
      901 tgtacggcga gtacccaaaa acaatgcaaa acattgtcaa gaatcgtctt cctaaattta
      961 gtaaagaaga agtgaaaatg gtgaagggat cattcgattt aattggaata aaccagtata
     1021 ctacttatta catgtatgat ccacataaaa gtccaccaaa agacctcggt taccagatgg
     1081 attggaatgt aggatttgca tatgagcgca aaggtgtacc aattggtcca agggcatatt
     1141 cgtattggct ctataacgta ccttgggggc tacataaagc cattatgtac attaaagaac
     1201 gatatggaaa cccgactatg attctagctg aaaatggcat ggatgatccg ggtaatataa
     1261 cccttgctaa aggtttacat gataccacaa ggataaacta ctacaaaggt tatttggctg
     1321 cacttaaaca aacagttgat gaaggagcaa atgtgatagg ctattttgct tggtcattac
     1381 ttgacaactt tgaatggaga ttaggctaca catcaaggtt tggcattgtt tatgttgatt
     1441 tcaagactct caagagatac cctaagatgt ctgcgtattg gttcaagaaa attctgcgca
     1501 gaagtaagcg ttaaggggtt taaggcctta ataagatgtt caatgaactc atagcaagta
     1561 tgaataagtt ggcatcaata agttgtatga aatggcttta aatgtcaaag tttttacttt
     1621 aaaataatgt cattctacat gttgcgtaac atgataaaat gtccatggat caccatagtt
     1681 cttcatgtga tgcatcactt aaaaaaagaa ctagccagct tgcaaaaagt gaatcaaacg
     1741 gtttgattta atttaggcgt cgtttgataa tacaaaatga tt
//
LOCUS       XM_071830151            1546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-dehydroquinate synthase,
            chloroplastic-like (LOC139839936), mRNA.
ACCESSION   XM_071830151
VERSION     XM_071830151.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1546
                     /gene="LOC139839936"
                     /note="3-dehydroquinate synthase, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139839936"
     CDS             67..1395
                     /gene="LOC139839936"
                     /codon_start=1
                     /product="3-dehydroquinate synthase, chloroplastic-like"
                     /protein_id="XP_071686252.1"
                     /db_xref="GeneID:139839936"
                     /translation="MAAAAATTATASYSKLSPKHNLPISSNKNVLGFQPENCIRIRPI
                     SSSRSAKLPMKVSATSAVTPLMDTSSKSSSDEAPTIVDVNLGDRSYPIYIGSGLLNQP
                     DLLQRHIHGKRVLVVTNTTVAPLYLDKVVSALTDGNPNIKVESVILPDGEKYKDMDTL
                     MKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSV
                     GGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDASFF
                     EWQEKNMHALMSRDPDAFAYAIKRSCENKAEVVSQDEKESGLRATLNLGHTFGHAIET
                     SYGYGHWLHGEAVAAGTVMAVDMSYRLGWIDKSIVERTNNILKLAKLPTTPPDMMTVD
                     MFKSVMAVDKKVADGLLRLILLKGPLGGCVFTGEYDRKALDETLHAFCKS"
     misc_feature    187..1392
                     /gene="LOC139839936"
                     /note="3-dehydroquinate synthase; Region: PLN02834"
                     /db_xref="CDD:215448"
     misc_feature    order(421..423,613..621,628..630,637..639,688..693,
                     697..699,754..756,763..765,808..810,832..834,853..855,
                     865..867,1042..1044,1054..1056,1093..1095)
                     /gene="LOC139839936"
                     /note="active site"
                     /db_xref="CDD:341474"
     misc_feature    order(535..537,556..561,640..642,649..651,655..663,
                     727..732,757..774)
                     /gene="LOC139839936"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:341474"
     misc_feature    order(853..855,1042..1044,1093..1095)
                     /gene="LOC139839936"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:341474"
     polyA_site      1546
                     /gene="LOC139839936"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctgaaattga aatggaatca cacatttttc accaacctcc acctctcaat ctcacccaac
       61 aattccatgg cagcagctgc ggcgacgacg gcgacggctt catattcaaa gctgtctccc
      121 aaacataacc tacctatctc ctccaataag aacgttctag ggtttcaacc tgaaaattgt
      181 attcgaattc gtccaatttc gagttctcgc tcagctaaac ttccgatgaa agtttccgct
      241 acctccgccg tgacgccatt gatggatact agtagcaagt cgagctccga tgaagctccg
      301 actatagttg atgtaaattt aggtgatcgg agttatccta tttacatcgg atccggtctt
      361 cttaatcaac cggatcttct acaaagacat attcatggta agagagttct tgtggtcact
      421 aacacaacag tggccccctt atacttggat aaagtcgtga gtgctttgac tgatggaaac
      481 cctaatatta aagttgaaag cgttattcta cctgatggcg agaagtacaa ggacatggac
      541 actctcatga aagtatttga caaagccatc gagtctcgat tggacagacg atgtacattt
      601 gttgcccttg gtggtggtgt tattggtgac atgtgtggat acgcagcagc ttcttttctt
      661 cgtggagtta atttcattca gattcctaca actgttatgg cacaggtgga ttcttctgtt
      721 gggggcaaaa ctggaataaa tcatcgattg ggaaaaaact tgattggtgc attttaccag
      781 ccacaatgtg ttctcataga tactgacact ttaaacacat tacctgatag agaattagca
      841 tcagggctag ctgaggtcat caagtatggg cttattagag acgcttcatt ttttgaatgg
      901 caagaaaaga acatgcatgc attaatgtcc agggacccag atgcttttgc atatgctatc
      961 aagcgttcat gtgaaaacaa ggctgaagtt gtgtcccaag atgagaagga aagtgggtta
     1021 cgggcgacac taaacctggg tcatactttt ggtcatgcaa ttgaaactag ctatggctat
     1081 ggacattggc ttcatggaga agcagttgca gctggcacgg tcatggctgt tgacatgtcg
     1141 tatcgcctgg gttggattga caaatctatt gtagaacgaa caaacaacat attaaaacta
     1201 gccaagctgc ccactactcc tccagatatg atgactgtag acatgtttaa atctgtcatg
     1261 gctgttgaca aaaaggtagc tgatggatta ctaagactca tcctcttaaa aggtccattg
     1321 ggaggctgtg ttttcacagg agaatatgat agaaaggccc ttgatgaaac cctacatgca
     1381 ttttgcaagt cgtgagcata tatacagttt tgattctttg ttgtgatatg tacgtgccat
     1441 acatggtata agttatgtct ccggatttct tgtacctaca agtgtgtttt ttagattcca
     1501 tttcatttat aataaactta ggggttctta gttccccttt ggttaa
//
LOCUS       XM_071830152            3419 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides golgin candidate 5-like
            (LOC139839937), mRNA.
ACCESSION   XM_071830152
VERSION     XM_071830152.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3419
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3419
                     /gene="LOC139839937"
                     /note="golgin candidate 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839937"
     CDS             308..3232
                     /gene="LOC139839937"
                     /codon_start=1
                     /product="golgin candidate 5-like"
                     /protein_id="XP_071686253.1"
                     /db_xref="GeneID:139839937"
                     /translation="MAWFSGKVSLGNFPDLAGAVNKFSESVKNIEKNFDSALGLEDKA
                     GGTTSTSEASGSWPSDLMAFMGQKGEDVNVESMEKHESSTPKSSSFSKKQEGADADIL
                     SDSVNEHDQPVKEEKVECVKPEEHEDHPAETNIEVLKEANSDPENSTETNSVNNVVFS
                     EDAEIVTEKSAETDDTIIDEATNPAAKHSEAKADSQAEVSVSCDDESEFVKRDSEVDA
                     LKKPESIQDESKSLLDQVAGPSEIPEVHPDSDVQMDQNGLKTQSDETANKVSIAEVVK
                     PSIDDEPGEATELNGVQSVTPEAANVGDVSEIVSELVLKEENVNTEVQILHELAGDNP
                     SNFKEQSSVSESNSSDNTAYALELEKVTREMKMMETALLGAARQAQAKADEIAKLMNE
                     NEQLKSTIEDQRRKPNEADIESLREEYHQRVSTLERKVYALTKERDTLRREQNKKSDA
                     AALLKEKDEIITQIMAEGEGLSKKQAAQESQIRKLRAQIRELEEEKKGLMSKLQVEES
                     KVESIRRDKAATEKLLQLTIEKNQAELATQKEYYTNALTAAKEAEAIAEARANSEAKT
                     EVERSLKEAQEREVMLVQTLEELRQTLSRTEQQAVFREDMLRRDVEDLQKRYQASERR
                     CEELVMQVPDSTRPLLRQIEAMQETTARRAEAWSAVERSLNSRLQEAEAKSAAAEERE
                     RSVNERLSQTLSRINVLEAQISILRGEQTQLTRSLEKERQKAAESRQEYLALKEEADT
                     HEDHVNQLEEEIRELKRKHKQDLHEALTHRELLQQDIEREKAARVELETTARLQSSIV
                     PEPSPLARTRSSYENGLTRRLSNASSLGSMEESFYLQTSLDSSDTFSERRNPGEPTIN
                     SFYIKTMTPNVFEAALRQKEGELASYMSRLASMESIRDSLAEELVKMTEECEKLRSEV
                     SLMPGLKADIEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNMLVNKIQV
                     LS"
     misc_feature    764..>1906
                     /gene="LOC139839937"
                     /note="Mitochondrial inner membrane protein; Region:
                     Mitofilin; pfam09731"
                     /db_xref="CDD:430783"
     misc_feature    <1370..>2671
                     /gene="LOC139839937"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
     misc_feature    2915..3205
                     /gene="LOC139839937"
                     /note="TATA element modulatory factor 1 TATA binding;
                     Region: TMF_TATA_bd; pfam12325"
                     /db_xref="CDD:432481"
ORIGIN      
        1 ttaccggcac atcaaaatcg gtgcttggct ccttcagtcc tacttccttt tattgcacat
       61 atgatgatta cttctcaaat atcgtcttca ttatgatcta cttcgtattt atcaaaggat
      121 tgattatcta ctcatagtca cctcttcgtc aaataaattt aatctttttt tccacagaaa
      181 acgatcatta gcagtttaat cactgctccg gtcagataga tttactgaat acaatctaaa
      241 aaggtttctc atgagattga tctttgctgt ttgagagatt tggtggattt aagttataga
      301 ataggtaatg gcttggttca gtgggaaggt ttcgttaggg aacttcccgg atttagctgg
      361 agctgttaat aagttcagcg agagcgtgaa gaacattgag aagaattttg acagtgctct
      421 tggtttggaa gacaaggctg ggggtactac ttccactagt gaagcatcag ggtcatggcc
      481 ttccgacttg atggccttta tgggacagaa aggtgaagat gttaatgttg agtccatgga
      541 aaaacatgaa tcttcaaccc ctaaatcttc ctccttttct aaaaaacagg aaggagctga
      601 tgctgatatt ttatctgatt ctgtcaatga gcatgaccag cccgttaaag aagagaaggt
      661 agaatgtgta aagcctgaag agcatgagga tcaccctgca gaaacaaata ttgaagtctt
      721 gaaggaagct aatagcgatc ccgaaaactc tacagaaaca aattctgtta ataatgttgt
      781 attttcagag gatgcagaga ttgttactga aaaatctgca gaaacagatg acacaataat
      841 tgatgaggca actaatcctg ctgccaaaca cagtgaagcc aaagctgatt cacaagcaga
      901 agtaagtgtg tcatgtgatg acgaatcaga gtttgtgaaa cgtgactcag aagttgatgc
      961 attaaagaag cccgaatcta tacaagacga gtcaaaaagt ttattagacc aagttgcggg
     1021 cccctctgaa ataccagaag ttcaccctga ttctgatgtg cagatggatc agaatggact
     1081 taagacacag tcagatgaga ctgcgaataa agtttcaata gctgaagttg tgaaaccttc
     1141 aattgatgat gaacctggag aagcgactga actaaatggt gttcaatctg tcacacctga
     1201 ggcagctaat gttggtgatg tgtctgagat agtttctgaa ttagttttga aggaagaaaa
     1261 tgtaaatact gaagttcaga tactacacga gctagctggt gataatccaa gtaactttaa
     1321 ggaacagagt tcagtttctg aaagtaattc gtctgataat acagcttatg cgcttgaact
     1381 ggagaaggtg acgagggaga tgaaaatgat ggagactgca cttctagggg ctgctcgaca
     1441 agctcaggca aaagctgatg aaattgcaaa attgatgaac gagaatgagc aactgaaatc
     1501 tacaattgag gatcagagga gaaagccaaa tgaagcagat attgaatctc tgcgagaaga
     1561 gtatcatcaa agggtctcaa cacttgaaag aaaggtttat gctctcacaa aagaaagaga
     1621 tacattacgt agagagcaaa acaagaaaag tgatgctgct gcccttctga aagaaaaaga
     1681 tgaaataatc actcaaataa tggcagaagg tgaagggctt tcaaagaaac aagctgctca
     1741 agaatctcag attaggaaat tgcgggcaca gatcagagag cttgaagaag agaagaaagg
     1801 attaatgtct aagctacagg ttgaagagag taaagtagag agtataagga gggataaggc
     1861 agctactgaa aagttgctgc aattaacaat agagaaaaac caggctgaac tagcaacaca
     1921 aaaagaatac tatacaaatg cattgactgc agctaaagaa gctgaagcaa tagcagaggc
     1981 gcgagctaac agtgaagcca aaactgaagt tgagagatcc ctaaaagagg ctcaagaacg
     2041 tgaagttatg ctggttcaga ccctagaaga acttagacaa actctgagca gaacggaaca
     2101 gcaggcagtt tttagagaag atatgcttag gagagatgtt gaggaccttc aaaaacgata
     2161 ccaagcaagt gagcgtagat gcgaagagtt ggtcatgcaa gttcctgatt caactagacc
     2221 tcttttgagg cagatagaag ctatgcagga aacaacagct agaagagcag aagcttggag
     2281 tgctgttgag agatcactaa attcaaggct tcaggaagcg gaggccaaat ctgcagctgc
     2341 agaggaaaga gagcgctctg taaatgaacg cctgtcccaa acattatcca ggattaatgt
     2401 tcttgaagct cagatatcaa tattaagagg cgagcaaaca caacttacta ggtcccttga
     2461 gaaggaaaga caaaaagcag ctgaaagcag gcaggaatac ttagctttaa aagaggaggc
     2521 agatactcat gaagatcacg tgaatcaact tgaagaagag ataagagaac tcaagagaaa
     2581 gcacaagcaa gatctccatg aagcattgac ccatcgcgaa cttcttcagc aggacattga
     2641 acgtgagaaa gctgcacgtg tggaactaga aacgacagct cgccttcagt cttctattgt
     2701 tcctgaacca agtcccctag cgagaaccag gtcttcctat gaaaatggct tgacacgaag
     2761 actttcaaat gctagcagtt taggcagcat ggaggaaagt ttctatctgc agacatcttt
     2821 ggactcatct gatactttct ctgaaagaag aaatcctgga gagccaacta tcaactcttt
     2881 ttatataaag acaatgaccc ctaatgtttt tgaggctgca cttcgtcaaa aggaaggaga
     2941 acttgcatct tatatgtcta gattggcatc catggaatcc atccgcgatt ctctagccga
     3001 ggagttggtt aagatgaccg aggagtgtga aaaattacgg tcagaagtgt ctttaatgcc
     3061 tggcttgaaa gcagacatag aagcattaag acgcaggcac tctgctgcac tggagttgat
     3121 gggtgaacga gatgaggagc ttgaagagct tcgtgctgat atcgtggacc tgaaggaaat
     3181 gtacagagaa caagtaaata tgcttgtaaa taagattcag gtgttaagct aatcaattag
     3241 tgctgactag gaaggtcatt ccctggagtg gttccttcaa gacaagtcaa attgagttga
     3301 tgacggtaca tgttgtagca tacgtggttt tacactcgaa agtggaggtt ctttattaaa
     3361 ttattatctt ttctactctt attatccctc ttgcattctt tttcttaaaa cacacttgg
//
LOCUS       XM_071830153             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pollen allergen Sal k
            5.0101-like (LOC139839938), mRNA.
ACCESSION   XM_071830153
VERSION     XM_071830153.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139839938"
                     /note="pollen allergen Sal k 5.0101-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139839938"
     CDS             1..525
                     /gene="LOC139839938"
                     /codon_start=1
                     /product="pollen allergen Sal k 5.0101-like"
                     /protein_id="XP_071686254.1"
                     /db_xref="GeneID:139839938"
                     /translation="MANYVDVLALLFIISSIVGPVTCRGDSTTTSSSSMASDGESFNI
                     QGKVYCDPCRIQFPIKISYPVPSTKVILRCRNRESGVETVKMEGMSDANGMYSLTAKG
                     DHEEEICEVRVTESPDAKCPEIMDDESSARVSLTDKNGVRGKSRMANPIGFMVKDIDP
                     RCKEILAEIGITGI"
     misc_feature    130..366
                     /gene="LOC139839938"
                     /note="Pollen protein Ole e 1 like; Region:
                     Pollen_Ole_e_1; pfam01190"
                     /db_xref="CDD:460103"
ORIGIN      
        1 atggctaatt acgtcgatgt gttagccctc ttattcatta tttcttccat cgtgggccca
       61 gtcacttgtc gtggggactc cacgaccacc tcctcatcat ctatggcatc agatggagaa
      121 tcattcaaca tacaaggaaa agtctattgc gatccttgtc ggattcaatt ccctatcaaa
      181 attagctacc ccgttcccag cactaaagtc atccttcgtt gtcgtaatcg tgaatcaggc
      241 gttgaaacgg ttaaaatgga gggcatgagt gatgctaacg gtatgtatag cctcacggct
      301 aagggtgatc atgaagagga aatatgtgaa gttcgggtta cagaaagccc ggatgctaaa
      361 tgcccggaga ttatggatga tgaaagtagt gcgcgtgttt cattgaccga taaaaatgga
      421 gttagaggta aatctcgaat ggcaaatcca attggattca tggtaaagga cattgatcct
      481 cgctgcaagg agattcttgc agagattggt atcacgggaa tttaa
//
LOCUS       XM_071830154            1631 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized Rho
            GTPase-activating protein At5g61530 (LOC139839939), mRNA.
ACCESSION   XM_071830154
VERSION     XM_071830154.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1631
                     /gene="LOC139839939"
                     /note="uncharacterized Rho GTPase-activating protein
                     At5g61530; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139839939"
     CDS             247..1380
                     /gene="LOC139839939"
                     /codon_start=1
                     /product="uncharacterized Rho GTPase-activating protein
                     At5g61530"
                     /protein_id="XP_071686255.1"
                     /db_xref="GeneID:139839939"
                     /translation="MPSVVSPQWQEKASGFFSSSGTKLKEAGQSAGTFVGEVAKDAKG
                     NVSEVAERVGSVVKSRWSLFQQPSTRQAMQERLVSAAATTSFFLRRGVSETKEKVVVG
                     KTKVEEVAKKTAQKSKTLLTDIERWQKGVASTDVFGVPIEVTVQRQDSTKPIPFLLVK
                     CADYLVLSGLNSPDLFKSEGNKKAIQQLVSLYNQDLNAALPEGVNPIDVAALVKCYLA
                     SLPQPLISFELHNEVRGARSSIPLMRNILKKLPTVNYMTLELVTALLLRVSQKSLLNK
                     MDAGSLAMEMAPIIMWQQGQRPETYIQFWNQPSRTQSNTNADPVQNYSEFDMLADESE
                     DEVSSAIPLDDGVPIDFSAIEVLQCLIEHHNAIFTDANETVWR"
     misc_feature    709..1128
                     /gene="LOC139839939"
                     /note="RhoGAP domain; Region: RhoGAP; pfam00620"
                     /db_xref="CDD:459875"
ORIGIN      
        1 gagtatgaaa gttaagagat tatatggaac tttactttat atttatttat atagtctaga
       61 gtttaaattt aattgactat aatatatgga ttgtgaagct agcatttatt tgttataaaa
      121 gattacaact ttataatgca ggcattagca tagcacctgt ttgatatatt accttgccaa
      181 ttactagaag attaagcgta ttaactgatt cgaaaatatt cttgattgtt gtccggattt
      241 agcttaatgc cttcagtagt ttcacctcag tggcaagaaa aggctagtgg tttcttctct
      301 tcttcaggga caaagctgaa agaagccggg caatccgctg gaacatttgt gggtgaggtt
      361 gcgaaagatg caaaaggtaa tgtttctgaa gtagccgaac gggtcgggtc tgtggtcaaa
      421 agccgatggt cactttttca gcagccgtct acgagacaag cgatgcagga acgtcttgtc
      481 tcggctgcag caaccacgag cttctttttg aggaggggtg tgtctgagac aaaagagaag
      541 gtggttgtcg ggaaaactaa agtcgaagag gtggcaaaga agactgccca gaagagcaaa
      601 actctgttga ctgatatcga gcggtggcag aagggtgttg caagcactga tgttttcggt
      661 gtgccaattg aggttacggt gcagcgacaa gattccacca aacctattcc ttttcttttg
      721 gtcaaatgtg ctgattatct cgtattatca ggactcaact cacctgattt attcaagtct
      781 gaaggaaaca agaaggccat acagcaacta gtgtcgttat acaaccaaga cttgaatgct
      841 gcactacctg aaggtgtgaa cccaattgat gttgcagctc ttgtcaagtg ttacctggct
      901 agccttcctc aaccgttaat cagttttgaa ctacacaatg aagtgcgagg ggctcgctca
      961 agtataccac tgatgagaaa tatattgaag aagcttccca cagttaacta catgacattg
     1021 gaactcgtta cagcgttatt gctccgtgtt agccagaagt ctcttcttaa caagatggat
     1081 gctggtagcc ttgcaatgga gatggcccca atcattatgt ggcaacaggg acagagacca
     1141 gaaacttaca tacagttttg gaaccaacca tcaagaactc aatccaatac aaatgccgat
     1201 cctgtacaaa attatagtga atttgatatg cttgcagatg agagcgagga tgaagtatca
     1261 tcggcaattc cattggacga tggcgtgcct atcgatttta gtgcaataga ggtgttacaa
     1321 tgtttaatag aacatcacaa tgccattttc acagatgcaa atgaaactgt atggaggtga
     1381 cctgttgctt atttttctgc aaagatggtt aaacttggtg atcaataatg ttcatataat
     1441 caacttattt acatacccaa tttgttttca gattgtttgg ttactggtca tctgtatatt
     1501 tgtgaagttg acataatgtt tagattagaa atggaaaatt gacaatttta atcaattaag
     1561 ttatgagtat atttttaaat aaagtagaaa attgttggta ttgtttgttg agtgaggatt
     1621 tgtaggggaa a
//
LOCUS       XM_071830155            1940 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RNA polymerase sigma factor
            sigA-like (LOC139839940), mRNA.
ACCESSION   XM_071830155
VERSION     XM_071830155.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1940
                     /gene="LOC139839940"
                     /note="RNA polymerase sigma factor sigA-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139839940"
     CDS             281..1810
                     /gene="LOC139839940"
                     /codon_start=1
                     /product="RNA polymerase sigma factor sigA-like"
                     /protein_id="XP_071686256.1"
                     /db_xref="GeneID:139839940"
                     /translation="MMATTAVVGLKAGERLLGSSSYYSDVSEKLSSSSSDLGFIFVPS
                     KNVISAKKLSNYGHGFKSNRHNQDTHYIRALKEHVDAASDYSSIDQWLQGFEHSELKG
                     SNEEFSVDALLLLQKSLLEKQWNLTTESTVTTANPTEKSCKKIYVSGSGKSARRRRID
                     TQRKTENKRFSSNEVGVRKPLKFVISPELLQNRARGYVKGLTSDTLLTHAEVVVLSKK
                     IKIGQHLEERKSRLKERLGYEPSEVQLAESLKISRPELQMKQIECKIAREKLAMSNVR
                     LVMSVAQKYASMGAEIGDLVQGGLIGLLRGIEKYDSSRGFKISTYVYWWIRQGVSKAL
                     IENSRTLRLPIHMHERLSAIRNAKAKLEEKGITPSIEKIAESLNMSTKKVLNATEAKC
                     KVFSLDRPAFPSLNGLPGDTIHSYMADDHPGNNPWHGVDNEALKDEVNKLMTTTLRER
                     EREIIRLYYGLDNEFLTWEDISRRMGLSRERVRQVGLVALEKLKHAARKTKLEAMLVE
                     H"
     misc_feature    896..1762
                     /gene="LOC139839940"
                     /note="RNA polymerase sigma factor, cyanobacterial
                     RpoD-like family; Region: Sig70-cyanoRpoD; TIGR02997"
                     /db_xref="CDD:274382"
ORIGIN      
        1 tgattttgca cagtgacacc acagtttatt gaggttcact cactttgaaa actcatcata
       61 atcaccacac attcgctcct taaccctgca aaatctcata acgctttgca taacgttgca
      121 tcagcgattc atatatcttc ataatttcaa cctaaattga gctaatttgg gagaagccat
      181 aagtgctatt ccaacaactt cattgttaag taatcttaga agagagaaag ttctatggtt
      241 ttagtaaatc aactctgtct actgctgtga agaaagttaa atgatggcta caactgcagt
      301 agttggacta aaggcaggtg aaagattgtt gggttcatct tcatattact ctgatgtgag
      361 tgaaaagctt tcaagcagta gtagtgatct cgggtttata tttgttccaa gtaagaatgt
      421 gattagtgca aaaaagttgt ccaactatgg gcacggtttt aaatctaatc gacataatca
      481 agatacgcat tacatccgag ctctaaagga acatgtggat gctgcttctg attattccag
      541 tatagaccaa tggcttcaag gatttgaaca ctcagaactc aaaggctcga atgaagagtt
      601 ttcagttgac gccttactct tattacagaa gtctttgtta gaaaaacaat ggaatcttac
      661 aaccgagagc accgtgacta ctgctaatcc aacagaaaaa agttgcaaaa agatttatgt
      721 tagcgggtcg ggaaaatctg cccgtaggcg tagaatagat actcagagga aaacagaaaa
      781 taaaagattt tcttctaatg aagttggtgt taggaaacct ttgaaatttg taatcagtcc
      841 agaacttctc caaaatcgtg caagaggcta cgttaaaggg ttaactagtg atacattgtt
      901 aactcatgca gaggttgtgg ttttatcaaa aaagatcaaa attggtcagc acttagaaga
      961 gcgtaaatca agattgaagg aaagattggg atatgaacca tcagaggtcc aacttgcaga
     1021 atccctgaaa atttcacgac ccgagttaca aatgaaacaa attgaatgca aaatagctag
     1081 agaaaagcta gccatgagca atgtccggtt agtaatgtcg gttgcacaaa agtatgctag
     1141 catgggagct gaaatcgggg acttggttca gggaggtctg atcggactac ttcgtgggat
     1201 tgaaaaatat gattcgtcgc gcgggtttaa aatctctacc tatgtttatt ggtggataag
     1261 acagggtgtt tcaaaagcgt tgattgaaaa ctctagaacc ctgagattac ctatacatat
     1321 gcatgaaaga ctgagtgcaa tacgaaatgc caaggctaag cttgaggaaa aaggaataac
     1381 cccgtcaatc gaaaaaattg cagaaagttt gaacatgtca acaaagaaag ttctaaatgc
     1441 cactgaggca aaatgcaaag tattctcact tgacaggcca gcgtttcctt ctttaaatgg
     1501 tcttccagga gatactattc acagttacat ggcagatgat caccctggta acaacccttg
     1561 gcatggagta gataacgaag cactcaagga tgaagtgaac aagttgatga ccacaacttt
     1621 aagggaacgt gaaagagaga tcatacgttt gtactatggt cttgataatg aattccttac
     1681 ttgggaagat attagtcgaa ggatggggtt atctagagaa cgagttaggc aggtggggct
     1741 tgttgcactt gagaaactaa aacatgcagc ccgcaagaca aaactcgagg ctatgctagt
     1801 ggagcattga tttttattat agccggaact aggtgaaagt gcctgtatat acatacgata
     1861 gatacataat tatacgtata atacgttgta tgtaaacact taaagtttgc gaaataatct
     1921 ggtgcacatt attcggaaaa
//
LOCUS       XM_071830156             831 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peptide methionine sulfoxide
            reductase-like (LOC139839941), mRNA.
ACCESSION   XM_071830156
VERSION     XM_071830156.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..831
                     /gene="LOC139839941"
                     /note="peptide methionine sulfoxide reductase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139839941"
     CDS             37..816
                     /gene="LOC139839941"
                     /codon_start=1
                     /product="peptide methionine sulfoxide reductase-like"
                     /protein_id="XP_071686257.1"
                     /db_xref="GeneID:139839941"
                     /translation="MLLLKTTTITAATTTAVAAVSLPLLTISSHLKPQPTPFTFPTKP
                     LIVRHQSTPKTMSWLTRFGFGTRTPTDSPSNQSPIAQGPDDDVPAPGQQFAQFGAGCF
                     WGVELAFQRVPGVTKTEVGYTQGFSDNPSYNDVCSGTTNHSEVVRVQYDPKNCSFESL
                     LDCFWDRHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAALESKERHQKKLNRTIVTEI
                     LPAKKFYRAEEYHQQYLAKGGRSGYKQSAEKGCNDPIRCYG"
     misc_feature    301..747
                     /gene="LOC139839941"
                     /note="Peptide methionine sulfoxide reductase MsrA
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: MsrA; COG0225"
                     /db_xref="CDD:439995"
ORIGIN      
        1 acgtcctatc ccacactata ataaataaac tcaaaaatgc tcctcctcaa aacaaccacc
       61 atcaccgccg ctacaaccac tgccgtcgcc gcagtatctc tccctctcct caccatatcc
      121 tcccacctaa aaccccaacc cactcccttc accttcccta caaaacccct catcgtacgt
      181 catcaatcca cccccaaaac catgtcttgg ttaacccggt tcggattcgg tacacgcacc
      241 cccaccgatt caccatcaaa ccaatcacca atcgcacaag gacctgacga tgatgttcct
      301 gcacccggcc aacagtttgc gcaatttggt gctgggtgtt tttggggtgt tgaattggcg
      361 tttcaaagag ttccgggtgt tactaaaact gaagttggtt atactcaagg gttttcggat
      421 aatccgagtt ataatgatgt ttgttctggg actactaatc attcggaggt tgttcgggtt
      481 cagtatgacc cgaaaaattg tagctttgag agtttgcttg attgtttttg ggacagacac
      541 gatcctacta cacttaaccg tcaggggaat gatgtaggaa cacaataccg atctgggata
      601 tatttctaca cacctgaaca agagaaagca gctttagagt caaaggagag acaccagaaa
      661 aaattgaacc gaacaatcgt aacagagatt cttcctgcaa agaagttcta tagggcggaa
      721 gagtaccatc agcagtatct tgcaaaaggc ggtcgatctg ggtataaaca atctgccgag
      781 aaaggttgca atgaccctat tcgttgctac ggctaagttt gtgtatttgt a
//
LOCUS       XR_011757163            1151 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839942), transcript variant X1, misc_RNA.
ACCESSION   XR_011757163
VERSION     XR_011757163.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1151
                     /gene="LOC139839942"
                     /note="uncharacterized LOC139839942; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839942"
     misc_RNA        1..1151
                     /gene="LOC139839942"
                     /product="uncharacterized protein, transcript variant X1"
                     /db_xref="GeneID:139839942"
ORIGIN      
        1 aatggatgca ctaatggcgt cgtacggtga tacttcctcc gattcggaat cagattctca
       61 acagccggtt agcaacgaca acgtccaatc atttccggca gccgttcttc ctccaccgcc
      121 gatcgatctt ctcaatcctc ccaattcact cgcaacagtt gattacttgg agtgtaatac
      181 agctagtaga attcgaagct tccctcatat tcatggcaat tacgctttac atgtttacat
      241 tccagtcatt ataccatctg aaagaaagaa ggagctggct cagtttttga aaaaagctac
      301 gtcccttgta ccaggtcttc atgttgtgga tatcgatgtt ccattacacg tgctggtaaa
      361 agatgaagag aagctaatac aagctgcact cgggagggaa tttcacatga gtcttggaag
      421 aactgtaccc atacgtgtgc atcaaataga ctcggtggtt gcgatgctac gtcagaggct
      481 tcagtttcag aaacggtttc tgattgattt taataaatgg gaggtttttg tgaatgatga
      541 tctgacacgc acatttcttt caatcgaaaa tttaacagta ggcttagttg agataacgaa
      601 acagattcaa tcagtcaatg atgtttataa gttgcacaat cttcctgaat tctacaagga
      661 tcctcgacct catatatcta tagcctgggc agtaggtgac atcagccaat ctttaaagag
      721 agtagttgaa ggagaaatga agaaatatgt taatgttgga ggatcgtcaa ccagaagtat
      781 gtttacctgc agattcggta acatcgtatg taaaattggc aataaaactt ataatatatg
      841 tggatctcca ggacaatgaa cacttaactt ataatgcaca tatcttgaga accatgtgca
      901 gttttaaaaa aaatttctcc tccatgtaac attagcatct atatatatat tatatttcga
      961 caatgagatt tattaggttt tgttgcatat agtatttgat gcatttttta tataatgatg
     1021 gatatattta gtaggtactt ttgggaatgt acccacctga tacctcttag gagttaggaa
     1081 gagttattag ggttatccat ttcattgatg tatagattaa catgaagaac aaccattttc
     1141 cgctttattt t
//
LOCUS       XM_071830157             944 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839942), transcript variant X2, mRNA.
ACCESSION   XM_071830157
VERSION     XM_071830157.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..944
                     /gene="LOC139839942"
                     /note="uncharacterized LOC139839942; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839942"
     CDS             2..859
                     /gene="LOC139839942"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686258.1"
                     /db_xref="GeneID:139839942"
                     /translation="MDALMASYGDTSSDSESDSQQPVSNDNVQSFPAAVLPPPPIDLL
                     NPPNSLATVDYLECNTASRIRSFPHIHGNYALHVYIPVIIPSERKKELAQFLKKATSL
                     VPGLHVVDIDVPLHVLVKDEEKLIQAALGREFHMSLGRTVPIRVHQIDSVVAMLRQRL
                     QFQKRFLIDFNKWEVFVNDDLTRTFLSIENLTVGLVEITKQIQSVNDVYKLHNLPEFY
                     KDPRPHISIAWAVGDISQSLKRVVEGEMKKYVNVGGSSTRSMFTCRFGNIVCKIGNKT
                     YNICGSPGQ"
     misc_feature    110..841
                     /gene="LOC139839942"
                     /note="Uncharacterized conserved protein; Region: HVSL;
                     pfam09749"
                     /db_xref="CDD:462880"
ORIGIN      
        1 aatggatgca ctaatggcgt cgtacggtga tacttcctcc gattcggaat cagattctca
       61 acagccggtt agcaacgaca acgtccaatc atttccggca gccgttcttc ctccaccgcc
      121 gatcgatctt ctcaatcctc ccaattcact cgcaacagtt gattacttgg agtgtaatac
      181 agctagtaga attcgaagct tccctcatat tcatggcaat tacgctttac atgtttacat
      241 tccagtcatt ataccatctg aaagaaagaa ggagctggct cagtttttga aaaaagctac
      301 gtcccttgta ccaggtcttc atgttgtgga tatcgatgtt ccattacacg tgctggtaaa
      361 agatgaagag aagctaatac aagctgcact cgggagggaa tttcacatga gtcttggaag
      421 aactgtaccc atacgtgtgc atcaaataga ctcggtggtt gcgatgctac gtcagaggct
      481 tcagtttcag aaacggtttc tgattgattt taataaatgg gaggtttttg tgaatgatga
      541 tctgacacgc acatttcttt caatcgaaaa tttaacagta ggcttagttg agataacgaa
      601 acagattcaa tcagtcaatg atgtttataa gttgcacaat cttcctgaat tctacaagga
      661 tcctcgacct catatatcta tagcctgggc agtaggtgac atcagccaat ctttaaagag
      721 agtagttgaa ggagaaatga agaaatatgt taatgttgga ggatcgtcaa ccagaagtat
      781 gtttacctgc agattcggta acatcgtatg taaaattggc aataaaactt ataatatatg
      841 tggatctcca ggacaatgaa cacttaactt ataatgcaca tatcttgaga accatgtgca
      901 gttttaaaaa aaatttctcc tccatgtaac attagcatct atat
//
LOCUS       XM_071830158             855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839943), mRNA.
ACCESSION   XM_071830158
VERSION     XM_071830158.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..855
                     /gene="LOC139839943"
                     /note="uncharacterized LOC139839943; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139839943"
     CDS             1..855
                     /gene="LOC139839943"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686259.1"
                     /db_xref="GeneID:139839943"
                     /translation="MDALMASYGDTSSDSESDSQQPVSDNVQSFPAAVLPPPPIDLLN
                     PPNSLATVDYLECNTASRIRSFPHIHGNYALHVYIPVIIPSERKKELAQFLKKATALV
                     PGLHVVDIDVPLHALVKDEEKLIQAALGREFHISLGRTVPIRVHQIDSVVAMLRQRLQ
                     FQKRFLIDFNKWEVFVNDDQTRTFLSIENLTGGLVEITKQIQSVNDVYKLHNLPEFYK
                     DPRPHISIAWAVGDINQSLKRAVGGEMKKYVNVGGSSTRSMFTCRFGNIVCKIGNKTY
                     NICGSPGQ"
     misc_feature    106..837
                     /gene="LOC139839943"
                     /note="Uncharacterized conserved protein; Region: HVSL;
                     pfam09749"
                     /db_xref="CDD:462880"
ORIGIN      
        1 atggatgcac taatggcttc atacggtgat acttcctccg attcggaatc agattctcaa
       61 cagccggtta gcgacaacgt ccaatcattt ccggcagccg ttcttcctcc accgccgatc
      121 gatcttctca atcctcccaa ttcactcgca acagttgatt acttggagtg taatacagct
      181 agtagaattc gaagcttccc tcatattcat ggcaattacg ctttacatgt ttacattcca
      241 gtcattatac catctgaaag aaagaaggag ctggctcagt ttttgaaaaa agccacggcg
      301 cttgtaccag gtcttcatgt tgtggatatc gatgttccgt tacatgcact ggtaaaagat
      361 gaagagaagc taatacaagc tgcactcggt agggaatttc acataagtct tggaagaact
      421 gtacccatac gtgtgcatca aatagactcg gtggttgcaa tgctacgtca gaggcttcaa
      481 tttcagaaac ggtttctgat cgactttaat aagtgggagg tttttgtgaa tgatgatcag
      541 acacgcacat ttctttcaat cgaaaattta acgggaggct tagttgagat aacgaaacag
      601 attcaatcag tcaatgatgt ttataagctg cacaatcttc ctgaattcta caaggatcca
      661 cgacctcata tatctatagc ctgggcggta ggtgacatca accaatcttt aaagagagca
      721 gttggaggag aaatgaagaa atatgttaat gttggaggat cgtcaaccag aagtatgttt
      781 acctgcagat tcggtaacat cgtatgtaaa attggcaata aaacttataa tatatgtgga
      841 tctccaggac aatga
//
LOCUS       XM_071830159             761 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein eL24 (LOC139839944), mRNA.
ACCESSION   XM_071830159
VERSION     XM_071830159.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..761
                     /gene="LOC139839944"
                     /note="large ribosomal subunit protein eL24; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139839944"
     CDS             66..551
                     /gene="LOC139839944"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL24"
                     /protein_id="XP_071686260.1"
                     /db_xref="GeneID:139839944"
                     /translation="MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFANSKCKRYFHN
                     KLKPSKLTWTAMYRKQHKKDIAQEAVRKRRRTTKKPYSRAIVGATLEVIQKKRSEKPE
                     VRDAAREAALREIKERIKKTKDEKKAKKAEVVSKQKSQGKGGNVPKGKGPKLGGGGGK
                     R"
     misc_feature    75..263
                     /gene="LOC139839944"
                     /note="Ribosomal protein L24e; Region: Ribosomal_L24e;
                     pfam01246"
                     /db_xref="CDD:460131"
     polyA_site      761
                     /gene="LOC139839944"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acgtattctt aaattagggg ttttatctgt tcacaaacta aagagaagag gaagctgcag
       61 ccgccatggt tctcaagact gagttgtgcc gattcagtgg ccaaaagatt tatcctggta
      121 ggggtattag attcatcaga tctgattcac aggtcttttt gtttgcgaat tcgaaatgta
      181 agaggtactt ccacaacaag ttgaagcctt caaagcttac atggactgcc atgtaccgaa
      241 agcagcacaa aaaggacatt gctcaagagg ctgtgaggaa gaggcgtcgt acaaccaaga
      301 agccttattc tagggctatt gtcggagcta cattggaagt tattcagaag aaacgaagtg
      361 agaagcctga agttcgtgat gctgctaggg aagctgctct tcgtgagatc aaggaaagga
      421 ttaaaaagac caaggacgag aagaaggcaa agaaagcaga ggtggtatcg aaacaaaaga
      481 gtcaaggaaa aggtggaaat gtgcctaaag gtaagggacc caagcttggt ggtggtggtg
      541 gaaagcgttg agaatctgtt gctgtattcc ttctttacta gatattactt tatgttagtc
      601 aagattttga gtattttgtt tttgttaatg tcggctgtgt tgtgccaaac ttgtgcttca
      661 gatgtttttg accatttacg atacatgttt tgtgaaattg gagtgaccta gttatctgat
      721 tattatggct tggctgcttg ggtcagctca gtgtttgttc t
//
LOCUS       XM_071830160            1495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839945), mRNA.
ACCESSION   XM_071830160
VERSION     XM_071830160.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1495
                     /gene="LOC139839945"
                     /note="uncharacterized LOC139839945; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839945"
     CDS             360..1304
                     /gene="LOC139839945"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686261.1"
                     /db_xref="GeneID:139839945"
                     /translation="MGKIWVEICLISARGLTRTSSLWKLQWFAVGWIDPNNKYCTNID
                     ASGNANPTWKTKFSALIDNSESKFDDLALNVEVYSRDPVFLKEKLQGTASVGLKEFLD
                     KHKNNSETLRPVEEVGSFQLRKKNSNKPQGFVDVSFRVSQETNEDSTYEDDDVGIKLR
                     IRDPGVNLPSQIGHSENRLQTNYPNPLSPGPSYNQPRAAITSNFSLTGGSNYQPPPMV
                     GPSYHHQPPPPVVGPSYHQQAPLPYNVGYMPTSSIDNFRPNYINMPGTRPEARAGPGF
                     AMGLGAGALAAGAAIFGDDFVSGFDLPTGFTISRDPLY"
     misc_feature    375..767
                     /gene="LOC139839945"
                     /note="C2 domain present in Soybean genes Regulated by
                     Cold 2 (SRC2)-like proteins; Region: C2_SRC2_like;
                     cd04051"
                     /db_xref="CDD:176016"
ORIGIN      
        1 attatttgat agtttgaaat agaaccattc gagacgttct aatgactaag cccatatttt
       61 ttatttgata aaacgcccat tttatgctaa aaggtcatca acgcctttat tatactgctc
      121 taagcttttt gactatttta tattcttgtc ttgtgtaaat gcatttataa tgctttactt
      181 gataccaaca aaaaggttga ttctttaagc actaagaaga ccaattccaa gactttcttg
      241 acaataaagt aaagcaccct tctgaaatga tggaaagtgc cttactttaa tccatattct
      301 atgctaaaca atcaaacttc acataccctt tttcttgatc aatatcaaat actccaaaaa
      361 tgggcaaaat ttgggttgaa atatgcttga tatctgctag aggactcacc agaacttcat
      421 cattatggaa gctccaatgg tttgctgttg ggtggattga tcccaacaac aagtattgca
      481 caaatattga tgcttctggg aatgcaaatc ctacatggaa aaccaagttt tctgctttga
      541 ttgataactc agaatcaaag tttgatgatt tggccctcaa tgttgaagtt tatagcagag
      601 atcctgtttt tttaaaagag aaacttcagg ggactgcaag tgttgggcta aaagaatttc
      661 ttgataagca taagaacaat tccgaaactc tgcggcctgt tgaagaagtt ggtagttttc
      721 agttgagaaa gaagaattcg aataaaccac aaggatttgt agatgtctcc tttcgagttt
      781 cacaagagac aaacgaggat agtacatatg aagatgatga cgttgggatc aagctaagga
      841 ttcgcgaccc tggtgtgaac ttgccatcac aaattggtca ttcagaaaac cgtctgcaaa
      901 caaattatcc aaacccgttg tcaccagggc caagctacaa ccaacctcga gctgcaatta
      961 catcgaattt ttcgttaaca ggaggatcca actatcaacc accacctatg gtaggaccaa
     1021 gttaccacca ccaaccacca ccacctgtgg taggaccaag ttaccatcaa caagcaccac
     1081 taccttataa tgttggctat atgccgacat cttcaataga caactttcga ccgaattaca
     1141 tcaacatgcc tggaacaaga ccagaagcaa gggctggacc tggttttgca atggggttag
     1201 gtgctggagc attggcggct ggtgcagcaa tctttggaga cgatttcgtt tcagggtttg
     1261 atcttcccac tggttttaca atatcaaggg atcctcttta ttgatgagtt atgcttgtac
     1321 caagttgtta ttttgatcaa ggatataaag atgacatgct tgatgtgtag caattgtctt
     1381 gtaagttgat atgcataaca tattgtgtta ataacctaat tcatatttaa acaaagatta
     1441 aaaagttgtt aggttgaacc aagatagcct aaggtctcag tacaatgaac atcgt
//
LOCUS       XM_071830161             881 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GCN5-related
            N-acetyltransferase 3, chloroplastic (LOC139839946), mRNA.
ACCESSION   XM_071830161
VERSION     XM_071830161.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..881
                     /gene="LOC139839946"
                     /note="GCN5-related N-acetyltransferase 3, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139839946"
     CDS             36..737
                     /gene="LOC139839946"
                     /codon_start=1
                     /product="GCN5-related N-acetyltransferase 3,
                     chloroplastic"
                     /protein_id="XP_071686262.1"
                     /db_xref="GeneID:139839946"
                     /translation="MVMAVTRFHTLPPAKIFNNHKPSLHHRNRRPPTPPIFISTSISD
                     INPVHLRDLYSSCNHSCHRFPNLLSDGRVEPVDVDKLRVAVSNSSVVVSVFTRPEVVT
                     ALSENLDRGSGGDWYRRMIPLTPLSGQLVGFGRAVSDHGLTASIYDVMVIPSLQGRGI
                     GRLILQRIIRLLTNKGIYDIAALCSDQEMDFFKACGFGDDILRSTTMMYTRTGNHTVK
                     RAGRKLLMVPPLRIS"
     misc_feature    <417..>626
                     /gene="LOC139839946"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; Region: ArgA; COG1246"
                     /db_xref="CDD:440859"
ORIGIN      
        1 ctacgagtac gtaattgact gacatattta gagatatggt catggcggtc acaagatttc
       61 ataccctacc gccggccaaa atattcaaca accacaaacc atcactccac caccgcaacc
      121 gccggccacc cacgccacca attttcatat caacgagtat atctgatata aatccggttc
      181 atttacgaga tctctacagt tcctgtaatc attcgtgcca ccgtttcccc aatttgttgt
      241 cggacggacg tgtggagccg gtcgacgttg ataaacttcg cgtcgctgta tcgaacagct
      301 ccgttgttgt ttccgttttc actagaccgg aagttgtaac ggcgttaagt gagaatttgg
      361 atagaggtag tggtggtgat tggtaccgga gaatgattcc gttaacaccg ttaagtggac
      421 agttagttgg atttggtaga gctgtttctg atcatggatt aactgcttct atttatgacg
      481 tcatggttat tccttcgtta caaggtagag gaattgggcg attgattctt caaaggatta
      541 tacgattgct tacaaataaa ggcatatatg acatagcagc tctttgttct gatcaagaaa
      601 tggatttctt caaggcatgt ggatttggag atgacatact tagatcaaca acaatgatgt
      661 ataccagaac gggtaatcat acagttaaaa gggctggtag gaaattacta atggttccac
      721 cacttagaat atcctaatat tgattaatta ttaaaaaaaa aaaaggaatc ctatctactg
      781 atgtattatt gagtaaatta atctttacaa tatttttagt tatatatata taaaagaatg
      841 tcaatatgac ataagaatct tgtttcactt agaacgatac g
//
LOCUS       XM_071830162            1384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839947), mRNA.
ACCESSION   XM_071830162
VERSION     XM_071830162.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1384
                     /gene="LOC139839947"
                     /note="uncharacterized LOC139839947; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839947"
     CDS             43..1092
                     /gene="LOC139839947"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686263.1"
                     /db_xref="GeneID:139839947"
                     /translation="MEALVCRNLGDPTTRPDSTQTTALTISTTHPIPKLNSPTSIRVQ
                     IKSTSLNYANYLQVLGKYQEKFDLPFIPGSDYSGIVESIGPNVTKFKVGDRVCSVANV
                     GSFAQFIVAEEKELYGVPEGCDLVAAGALPVAYGTSHVALLHRANLKSGQVLLVLGAA
                     GGVGLAAVQIGKVCGAVVIAVARGTEKVDFLKQMGVDHVVDLSKGGVIENVRAFLKTR
                     KLKGVDVLYDPVGGKLTKESMKLLNWGAQILVIGFASGEVPVIPANIALVKNWTIHGL
                     YWGSYKVNNPSILEDSLKELLSWLARGLITIYASHSYKVQQANLAFLDIRDRKVIGKV
                     MITFDDPKTTISSKL"
     misc_feature    43..1053
                     /gene="LOC139839947"
                     /note="Quinone oxidoreductase (QOR); Region: QOR1;
                     cd08241"
                     /db_xref="CDD:176203"
     misc_feature    order(193..198,439..441,451..453,514..516,523..531,
                     586..591,601..603,646..648,727..729,793..798,802..807,
                     868..876,1024..1026,1030..1032,1036..1038)
                     /gene="LOC139839947"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:176203"
ORIGIN      
        1 ttataagtgc tcctttttat ttttttctta atctttccaa aaatggaagc tttggtttgc
       61 agaaacctcg gtgatccaac aacacgaccg gattcaaccc aaactaccgc ccttactatc
      121 tcaacaactc acccaatccc caaactcaat tcaccaactt caatcagagt tcaaatcaaa
      181 tccaccagct taaattacgc caattacctt caagttcttg gtaaatatca agagaaattc
      241 gatttaccat ttattccagg ttccgattac tccgggatag ttgaatccat cggtccaaac
      301 gtcactaaat tcaaagtcgg tgatcgtgtt tgttcggttg ctaacgtcgg ttcttttgct
      361 cagtttattg ttgccgagga gaaggaattg tatggagtac cagaagggtg tgatctggtg
      421 gctgctggtg cactgccagt tgcgtatgga acttctcatg tggcgttgct tcatagggct
      481 aatctcaagt ctggtcaggt gctactagtt cttggtgcag ctggaggtgt aggtcttgca
      541 gctgttcaaa tcggaaaagt ttgcggtgcc gttgtcatcg cagttgctag aggaactgag
      601 aaagtagatt tcttaaagca aatgggtgtt gaccatgttg ttgacttgag caaaggaggt
      661 gttatagaaa atgtgagggc gttcttgaaa acaagaaagc tcaaaggggt tgatgttttg
      721 tatgatcctg ttggaggcaa gcttacgaaa gaaagcatga agttgttgaa ttggggggca
      781 caaattttag ttatagggtt tgcgagtggc gaggtccctg ttattccagc taatattgct
      841 ttggtaaaga attggacaat acatggactg tactggggga gttataaagt gaataatcca
      901 agtatacttg aagactcttt aaaggagctg ttatcttggt tggcaagagg tttaattacc
      961 atctacgctt ctcattcata caaagtccaa caggccaatc ttgcatttct ggatattagg
     1021 gaccgaaaag taattgggaa ggtgatgatt acttttgatg atcctaaaac aacaatttca
     1081 tcgaagctct agaccagtac tctgtatcaa tgactaaagt atgatgatgg aatcagtaag
     1141 tgccaaaacg tctacaaatt cttaagaaaa taacgcatca atagaataat atccactgtc
     1201 ttagcatcat aacactcaca aacgaggttg ttggtaataa tattgacggt gttctgtatt
     1261 taaatttatg gttaatgaat gagttttgtc tgttttggtt tgttttttca tgcaatgaaa
     1321 tgtggttttc attgttctgt aagaactcga gaccatcttt attataaata tttgcaatat
     1381 ttct
//
LOCUS       XM_071830163            1833 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides autophagy-related protein
            18d-like (LOC139839948), transcript variant X1, mRNA.
ACCESSION   XM_071830163
VERSION     XM_071830163.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1833
                     /gene="LOC139839948"
                     /note="autophagy-related protein 18d-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139839948"
     CDS             235..1473
                     /gene="LOC139839948"
                     /codon_start=1
                     /product="autophagy-related protein 18d-like"
                     /protein_id="XP_071686264.1"
                     /db_xref="GeneID:139839948"
                     /translation="MSLAVSTFQQSEFASVEPPMDAMYDPSDNSNLEVDENGIDLLSV
                     YWNQDYSCFAAGTNHGFRIYNCDPFQETFRRDLKSGGFGIIEMLFKSNIIALVGGKDN
                     TQYPPNKVIIWDDHQSRCIGEFSFRSDVRAVKLRRDRIVVVLEHKIYVYNFVELRLLH
                     QIETLSNPRGLCCLSHQVNTSVLACPGLRRGQVRVEHFGLNMTKLINAHDSRIACLTM
                     TMDGLLLATASTKGTLIRIFNTMDGTQLQEVRRGVDRADIYGISLSPNVQWLAVSSDK
                     GTVHIFSLRVRVVSEDRLAQSTVSHFPALLHQSSSSSLDALIPPSAAGANPGSSLSFM
                     KGVLPRYFSSEWSFARFHLPECTNYMSAFGSQNTIIIVGMDGSFYRCIFDPVNGGEMV
                     QHEYVRFLKTKLKPRNNVLP"
     misc_feature    361..471
                     /gene="LOC139839948"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    487..612
                     /gene="LOC139839948"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <514..1083
                     /gene="LOC139839948"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    871..987
                     /gene="LOC139839948"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 acgcaatata ttttactccg tatttattat atcttcaacg tctgtgatct gatctctatt
       61 ttacttcggc acaacaatca cttgttttta aatttttaat caatttcatc cacaatcgcg
      121 ctcatgtttg accaattgac ctacggtaaa cgtagacgct aattatctac aggattctgc
      181 gaatcgagtt acgaaattcc ttaggttgct ttagtgactg ttgtaacttc ccctatgagc
      241 ctggctgttt caacatttca acaatcagag tttgcatcag ttgagccccc aatggatgct
      301 atgtatgatc catctgacaa ttcaaatttg gaggttgatg agaatggaat agatttacta
      361 tcagtgtact ggaaccagga ttatagttgt tttgctgctg gtacaaacca tggttttcgt
      421 atatacaatt gtgatccttt tcaagaaacc tttaggcgtg atctcaaaag tggaggattt
      481 ggcataattg agatgctttt caaaagcaac attatagcac ttgttggtgg caaagataat
      541 acacagtatc ctccaaataa agtaataatc tgggatgatc atcaaagccg gtgcattggt
      601 gaattttcat ttaggtctga tgttagggcg gtaaaattaa gacgtgaccg tattgttgtt
      661 gttcttgaac acaagatata tgtttataat tttgttgaac tgaggctttt acatcagatt
      721 gagacccttt caaatcctag aggactttgt tgtttatctc accaggtgaa tacttctgta
      781 ttggcgtgcc caggtctacg acgaggacag gtcagggttg aacattttgg actaaatatg
      841 accaagttga taaatgctca tgattctcgg atagcatgtt tgaccatgac aatggacggg
      901 cttcttctcg ctactgccag cactaagggc acgttgataa ggatttttaa cacaatggat
      961 ggaactcagt tacaagaggt gcgcagagga gtggataggg ctgatatata tggtatatcc
     1021 ctatctccaa atgtacaatg gctggctgtg tcaagcgaca aaggtaccgt acatatattt
     1081 agtctgagag tgcgtgtggt cagtgaggat cgattggctc agtctacggt tagccatttt
     1141 ccagcactat tgcaccagag ttcttcatct tctcttgatg ccctcattcc accaagtgct
     1201 gctggtgcca atcctggatc ttcactatct ttcatgaaag gggttttgcc aagatatttt
     1261 agctcagaat ggtcatttgc tcggtttcac ttgccagaat gcaccaatta catgtcagca
     1321 tttggatcac agaacacaat cattattgtt ggcatggatg gaagtttcta caggtgcata
     1381 tttgatcctg tgaatggagg ggagatggtg cagcatgagt atgtacgttt tctgaaaacc
     1441 aaactgaagc ctagaaacaa cgttcttcct taaaaatctg gactcggtta acatgtgaat
     1501 attgctcact tgccttgtaa ataagtattt caggttccaa cctgttatct gacggaatta
     1561 gtttgcggta tatctttaaa aaaatagtat cactgataac tattaaaagc caaaggcagt
     1621 gggtcaaaca tttttttttt tcttatgtga tggaattggg ttattgctat gcagccggca
     1681 gcaagttatt atttgtgaat tgtgaataat cgcgtaactg tgctaacata caagaaaaca
     1741 atcattttgc tgcatatttt gattcatgat aatctttttg tatcatatat aagtcacatg
     1801 tacatgatac atgttatgag ctctttttta tgg
//
LOCUS       XM_071830164            1879 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides autophagy-related protein
            18d-like (LOC139839948), transcript variant X2, mRNA.
ACCESSION   XM_071830164
VERSION     XM_071830164.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1879
                     /gene="LOC139839948"
                     /note="autophagy-related protein 18d-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139839948"
     CDS             281..1519
                     /gene="LOC139839948"
                     /codon_start=1
                     /product="autophagy-related protein 18d-like"
                     /protein_id="XP_071686265.1"
                     /db_xref="GeneID:139839948"
                     /translation="MSLAVSTFQQSEFASVEPPMDAMYDPSDNSNLEVDENGIDLLSV
                     YWNQDYSCFAAGTNHGFRIYNCDPFQETFRRDLKSGGFGIIEMLFKSNIIALVGGKDN
                     TQYPPNKVIIWDDHQSRCIGEFSFRSDVRAVKLRRDRIVVVLEHKIYVYNFVELRLLH
                     QIETLSNPRGLCCLSHQVNTSVLACPGLRRGQVRVEHFGLNMTKLINAHDSRIACLTM
                     TMDGLLLATASTKGTLIRIFNTMDGTQLQEVRRGVDRADIYGISLSPNVQWLAVSSDK
                     GTVHIFSLRVRVVSEDRLAQSTVSHFPALLHQSSSSSLDALIPPSAAGANPGSSLSFM
                     KGVLPRYFSSEWSFARFHLPECTNYMSAFGSQNTIIIVGMDGSFYRCIFDPVNGGEMV
                     QHEYVRFLKTKLKPRNNVLP"
     misc_feature    407..517
                     /gene="LOC139839948"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    533..658
                     /gene="LOC139839948"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <560..1129
                     /gene="LOC139839948"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    917..1033
                     /gene="LOC139839948"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 acgcaatata ttttactccg tatttattat atcttcaacg tctgtgatct gatctctatt
       61 ttacttcggc acaacaatca cttgttttta aatttttaat caatttcatc cacaatcgcg
      121 ctcatgtttg accaattgac ctacggtaca tgattcgatc gtgtttcaac tttattaact
      181 tgtaattcat ggtaaacgta gacgctaatt atctacagga ttctgcgaat cgagttacga
      241 aattccttag gttgctttag tgactgttgt aacttcccct atgagcctgg ctgtttcaac
      301 atttcaacaa tcagagtttg catcagttga gcccccaatg gatgctatgt atgatccatc
      361 tgacaattca aatttggagg ttgatgagaa tggaatagat ttactatcag tgtactggaa
      421 ccaggattat agttgttttg ctgctggtac aaaccatggt tttcgtatat acaattgtga
      481 tccttttcaa gaaaccttta ggcgtgatct caaaagtgga ggatttggca taattgagat
      541 gcttttcaaa agcaacatta tagcacttgt tggtggcaaa gataatacac agtatcctcc
      601 aaataaagta ataatctggg atgatcatca aagccggtgc attggtgaat tttcatttag
      661 gtctgatgtt agggcggtaa aattaagacg tgaccgtatt gttgttgttc ttgaacacaa
      721 gatatatgtt tataattttg ttgaactgag gcttttacat cagattgaga ccctttcaaa
      781 tcctagagga ctttgttgtt tatctcacca ggtgaatact tctgtattgg cgtgcccagg
      841 tctacgacga ggacaggtca gggttgaaca ttttggacta aatatgacca agttgataaa
      901 tgctcatgat tctcggatag catgtttgac catgacaatg gacgggcttc ttctcgctac
      961 tgccagcact aagggcacgt tgataaggat ttttaacaca atggatggaa ctcagttaca
     1021 agaggtgcgc agaggagtgg atagggctga tatatatggt atatccctat ctccaaatgt
     1081 acaatggctg gctgtgtcaa gcgacaaagg taccgtacat atatttagtc tgagagtgcg
     1141 tgtggtcagt gaggatcgat tggctcagtc tacggttagc cattttccag cactattgca
     1201 ccagagttct tcatcttctc ttgatgccct cattccacca agtgctgctg gtgccaatcc
     1261 tggatcttca ctatctttca tgaaaggggt tttgccaaga tattttagct cagaatggtc
     1321 atttgctcgg tttcacttgc cagaatgcac caattacatg tcagcatttg gatcacagaa
     1381 cacaatcatt attgttggca tggatggaag tttctacagg tgcatatttg atcctgtgaa
     1441 tggaggggag atggtgcagc atgagtatgt acgttttctg aaaaccaaac tgaagcctag
     1501 aaacaacgtt cttccttaaa aatctggact cggttaacat gtgaatattg ctcacttgcc
     1561 ttgtaaataa gtatttcagg ttccaacctg ttatctgacg gaattagttt gcggtatatc
     1621 tttaaaaaaa tagtatcact gataactatt aaaagccaaa ggcagtgggt caaacatttt
     1681 tttttttctt atgtgatgga attgggttat tgctatgcag ccggcagcaa gttattattt
     1741 gtgaattgtg aataatcgcg taactgtgct aacatacaag aaaacaatca ttttgctgca
     1801 tattttgatt catgataatc tttttgtatc atatataagt cacatgtaca tgatacatgt
     1861 tatgagctct tttttatgg
//
LOCUS       XM_071830165            1803 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839949), transcript variant X1, mRNA.
ACCESSION   XM_071830165
VERSION     XM_071830165.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1803
                     /gene="LOC139839949"
                     /note="uncharacterized LOC139839949; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839949"
     CDS             59..1432
                     /gene="LOC139839949"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686266.1"
                     /db_xref="GeneID:139839949"
                     /translation="METTGVNIDTTDPDAFVSDNLANLSSSNPRITSSRTTSSSSFPV
                     IRFLQAPVTTVLEYSGILRPRSNNEYLESESLIRDHHNNHNHNGASDSDTVTSSNGGE
                     NRDVSIRIIGAADPGEGEHDVEGGEPVAVSGGDGGRETADSSDLDGGNGESGSHSDSS
                     YQQRYDMQQVSRWAEQILPFSLLLLIVFIRQHLQGFFVTIYVTAFMYKSNDILRKQTA
                     LKGERKLSVLAGYYIVFVLHVIGVYWWYQNDDLCYPLFMVPPRAIPPFWHAIFTIIVN
                     DSMVRQAAMAFKLVLLMYYRNGKGHNFRRQGQMLTLVEYAMLLYRAFLPAPVWYRFFL
                     NKEYGSLFSSLTTGLYLTFKLTSIVEKVGSLWTALKALSRKDVHYGIYATPEQQVMEA
                     GDLCAICQEKMQAPVLLRCKHIFCEDCVSEWFERERTCPLCRAVVKPADLRSFSDGST
                     SLFFQLF"
     misc_feature    <959..>1360
                     /gene="LOC139839949"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: HRD1; COG5243"
                     /db_xref="CDD:227568"
     misc_feature    1238..1360
                     /gene="LOC139839949"
                     /note="RING finger, HC subclass, found in RING finger and
                     transmembrane domain-containing protein RNFT1, RNFT2, and
                     similar proteins; Region: RING-HC_RNFT1-like; cd16532"
                     /db_xref="CDD:438194"
ORIGIN      
        1 catatttgta gggtttttgt ctgaattttg taattgttcg cgtcttgttc atcaattaat
       61 ggaaacaacg ggtgtaaata ttgatacaac ggatcctgat gcctttgtaa gtgataattt
      121 agctaattta tcttcatcaa accctagaat tactagtagt agaacgacgt cgtcttcttc
      181 gtttccagtt attcgctttt tacaagcacc tgtaaccact gtattagaat actcaggtat
      241 tcttcgacct aggtcgaata acgagtatct tgaatcagaa agtttgattc gtgatcatca
      301 taataatcac aatcacaacg gtgcgagtga ttcagatacg gttacaagta gtaatggtgg
      361 tgaaaatagg gatgtttcta ttaggattat tggtgctgca gatcctggtg aaggagaaca
      421 tgatgtggag ggcggtgaac ccgtggcggt cagtggtgga gatggtggtc gagagacggc
      481 tgattctagt gatttagatg gtggaaatgg tgagagtggg agtcatagtg attcttcgta
      541 tcaacaacgg tatgatatgc aacaggtttc aaggtgggct gagcagattc taccgttttc
      601 gttactgttg ttgattgtgt tcattcggca gcatttgcaa ggtttctttg tcacgattta
      661 tgtgactgct ttcatgtaca aatctaatga tattcttaga aagcagactg ctttaaaggg
      721 ggagagaaaa ctgtctgtcc ttgctggtta ttatatagtt tttgtacttc atgtgattgg
      781 agtgtattgg tggtaccaaa atgatgatct ttgttatccg ttgttcatgg ttccgccaag
      841 agcaatacca ccattctggc atgctatatt caccatcatt gtcaatgatt caatggtgcg
      901 gcaggcagcg atggctttta agctggtatt acttatgtat tatagaaatg gcaagggcca
      961 taattttcgt aggcagggtc agatgttgac cctggttgag tatgcgatgc tgttataccg
     1021 tgcattcttg cctgctccag tctggtaccg ttttttcctc aacaaagagt acgggagcct
     1081 cttttcgtct ttgactaccg gattatatct aactttcaag cttacatcga tagttgagaa
     1141 ggttggatct ttgtggactg ctttgaaggc gttgtcaaga aaagatgtcc attacggaat
     1201 atatgcaaca ccagaacagc aggtaatgga agcaggtgac ttatgcgcta tttgccaaga
     1261 aaaaatgcaa gctccagttt tgttgcgatg taaacacatt ttctgtgaag attgtgtttc
     1321 cgaatggttc gaaagagaaa gaacatgccc tttatgcagg gcggtggtga aaccagcaga
     1381 tttacgctca tttagtgacg gatccacaag cctcttcttc cagttattct gaatgcgaag
     1441 acttgagaat gaaaatggcg ttttcttgac acctcttcat gtgggtatct atttgtttcg
     1501 gttctaatcg ttgcctcatt catcaaatac ccaacttata atcaggatca ctgtaaacaa
     1561 aagtgtcctg agcattcttt tcacctaaag ttatagtctt gaactttata taagccttat
     1621 ataatacaca atgtaaatga gatgccatct tcttgatttt gttaatattt taatgctggg
     1681 aataactcac ccaagttaca acacacttct agatacatgc ttgatggagt gtgtaaacta
     1741 tgacgcaaga tttggtcttt ttacctatgt ttcaatatat tgcatatata gatgagtaga
     1801 tga
//
LOCUS       XM_071830166            1800 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839949), transcript variant X2, mRNA.
ACCESSION   XM_071830166
VERSION     XM_071830166.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1800
                     /gene="LOC139839949"
                     /note="uncharacterized LOC139839949; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139839949"
     CDS             59..1429
                     /gene="LOC139839949"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686267.1"
                     /db_xref="GeneID:139839949"
                     /translation="METTGVNIDTTDPDAFVSDNLANLSSSNPRITSSRTTSSSSFPV
                     IRFLQAPVTTVLEYSGILRPRSNNEYLESESLIRDHHNNHNHNGASDSDTVTSSNGGE
                     NRDVSIRIIGAADPGEGEHDVEGGEPVAVSGGDGGRETADSSDLDGGNGESGSHSDSS
                     YQQRYDMQQVSRWAEQILPFSLLLLIVFIRQHLQGFFVTIYVTAFMYKSNDILRKQTA
                     LKGERKLSVLAGYYIVFVLHVIGVYWWYQNDDLCYPLFMVPPRAIPPFWHAIFTIIVN
                     DSMVRQAAMAFKLVLLMYYRNGKGHNFRRQGQMLTLVEYAMLLYRAFLPAPVWYRFFL
                     NKEYGSLFSSLTTGLYLTFKLTSIVEKVGSLWTALKALSRKDVHYGIYATPEQVMEAG
                     DLCAICQEKMQAPVLLRCKHIFCEDCVSEWFERERTCPLCRAVVKPADLRSFSDGSTS
                     LFFQLF"
     misc_feature    <959..>1357
                     /gene="LOC139839949"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: HRD1; COG5243"
                     /db_xref="CDD:227568"
     misc_feature    1235..1357
                     /gene="LOC139839949"
                     /note="RING finger, HC subclass, found in RING finger and
                     transmembrane domain-containing protein RNFT1, RNFT2, and
                     similar proteins; Region: RING-HC_RNFT1-like; cd16532"
                     /db_xref="CDD:438194"
ORIGIN      
        1 catatttgta gggtttttgt ctgaattttg taattgttcg cgtcttgttc atcaattaat
       61 ggaaacaacg ggtgtaaata ttgatacaac ggatcctgat gcctttgtaa gtgataattt
      121 agctaattta tcttcatcaa accctagaat tactagtagt agaacgacgt cgtcttcttc
      181 gtttccagtt attcgctttt tacaagcacc tgtaaccact gtattagaat actcaggtat
      241 tcttcgacct aggtcgaata acgagtatct tgaatcagaa agtttgattc gtgatcatca
      301 taataatcac aatcacaacg gtgcgagtga ttcagatacg gttacaagta gtaatggtgg
      361 tgaaaatagg gatgtttcta ttaggattat tggtgctgca gatcctggtg aaggagaaca
      421 tgatgtggag ggcggtgaac ccgtggcggt cagtggtgga gatggtggtc gagagacggc
      481 tgattctagt gatttagatg gtggaaatgg tgagagtggg agtcatagtg attcttcgta
      541 tcaacaacgg tatgatatgc aacaggtttc aaggtgggct gagcagattc taccgttttc
      601 gttactgttg ttgattgtgt tcattcggca gcatttgcaa ggtttctttg tcacgattta
      661 tgtgactgct ttcatgtaca aatctaatga tattcttaga aagcagactg ctttaaaggg
      721 ggagagaaaa ctgtctgtcc ttgctggtta ttatatagtt tttgtacttc atgtgattgg
      781 agtgtattgg tggtaccaaa atgatgatct ttgttatccg ttgttcatgg ttccgccaag
      841 agcaatacca ccattctggc atgctatatt caccatcatt gtcaatgatt caatggtgcg
      901 gcaggcagcg atggctttta agctggtatt acttatgtat tatagaaatg gcaagggcca
      961 taattttcgt aggcagggtc agatgttgac cctggttgag tatgcgatgc tgttataccg
     1021 tgcattcttg cctgctccag tctggtaccg ttttttcctc aacaaagagt acgggagcct
     1081 cttttcgtct ttgactaccg gattatatct aactttcaag cttacatcga tagttgagaa
     1141 ggttggatct ttgtggactg ctttgaaggc gttgtcaaga aaagatgtcc attacggaat
     1201 atatgcaaca ccagaacagg taatggaagc aggtgactta tgcgctattt gccaagaaaa
     1261 aatgcaagct ccagttttgt tgcgatgtaa acacattttc tgtgaagatt gtgtttccga
     1321 atggttcgaa agagaaagaa catgcccttt atgcagggcg gtggtgaaac cagcagattt
     1381 acgctcattt agtgacggat ccacaagcct cttcttccag ttattctgaa tgcgaagact
     1441 tgagaatgaa aatggcgttt tcttgacacc tcttcatgtg ggtatctatt tgtttcggtt
     1501 ctaatcgttg cctcattcat caaataccca acttataatc aggatcactg taaacaaaag
     1561 tgtcctgagc attcttttca cctaaagtta tagtcttgaa ctttatataa gccttatata
     1621 atacacaatg taaatgagat gccatcttct tgattttgtt aatattttaa tgctgggaat
     1681 aactcaccca agttacaaca cacttctaga tacatgcttg atggagtgtg taaactatga
     1741 cgcaagattt ggtcttttta cctatgtttc aatatattgc atatatagat gagtagatga
//
LOCUS       XM_071830167            2635 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides potassium transporter 2-like
            (LOC139839950), mRNA.
ACCESSION   XM_071830167
VERSION     XM_071830167.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2635
                     /gene="LOC139839950"
                     /note="potassium transporter 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 47
                     Proteins"
                     /db_xref="GeneID:139839950"
     CDS             189..2558
                     /gene="LOC139839950"
                     /codon_start=1
                     /product="potassium transporter 2-like"
                     /protein_id="XP_071686268.1"
                     /db_xref="GeneID:139839950"
                     /translation="MDLEDKKISGNAKDSWRTTLLLAYQSLGVVYGDLSISPIYVYKS
                     TFADDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYSSICR
                     HAKVSLLPNRQIADESLSTYKLKQPPESENSSKVKMLLEKHKTLHTALLILVLLGTCM
                     VIGDGLLTPAISVFSAVSGLELSMSKEHHEYAVIPITCFILVCLFALQHYGTHRVGLF
                     FAPIVLLWLLCISGLGLYNIFYWDPHVYKALSPYYMYKFLKKTKKRGWMSLGGILLCI
                     TGSEAMFADLGHFSYSAIQIAFTFLVYPALILGYMGQAAYLSKHHQMTHNISYYVSVP
                     ESVRWPVLVIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKKHGQIYIP
                     EINWILMILCIAVTIGFRDTKHMGNASGLAVMAVMLVTTCLMSLVIILCWHKPPILAL
                     CFLLFFGSIELLYFSASLVKFREGAWLPLLLALFLVTVMFVWHYATTKKYEYDLQNKV
                     SLEWLLALGPSLGMSRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHCILVFVCVKSVP
                     VPFVPRAERYLMGRVGPASLRSYRCIVRYGYRDVHQDVDSFESELANRIADFIRYDWS
                     RPELTTDPGNEDNGLPSSRSSGEYRLAVIGNSDFSTSRPFESEQSMQQVSVSVGFSTI
                     ESVTGIIENDPQLKRRVTFAIDDHNDSDDPKDVQMREELNDLFDAQQSGTAFILGHSH
                     VKATQGSSVFKRLAINFAYNFLRRNCRGPDVVLKVPPASLLEVGMVYVV"
     misc_feature    189..2555
                     /gene="LOC139839950"
                     /note="K+ potassium transporter; Region: K_trans; cl15781"
                     /db_xref="CDD:449589"
ORIGIN      
        1 atctggttta gtttttggat atatcttctt gcctaattta acataagtac atcttcatta
       61 accaaaattt ggccactttg gtaggaattt taattctcaa caacccacat gtaggcatat
      121 tgtctgggat ctgcatttag cttgtttcat aatcatcact ttaaaggaaa tatgtatttc
      181 tgagaaacat ggatcttgaa gacaaaaaaa tttctggaaa tgctaaggat tcttggagaa
      241 caacattgct gttagcttac cagagtctcg gtgtagttta cggagacctc agcatttcgc
      301 ctatttatgt ctacaaaagc acatttgcag atgatattca tcattcagaa acaaatgaag
      361 agatatttgg cgtgctttca tttgttttct ggactttaac tttagtccct ttgttcaaat
      421 acgtgttcat tgttcttcga gctgatgata atggtgaagg tggaactttt gctctttatt
      481 cttctatatg tcgacatgcg aaagtaagcc tactaccaaa ccgacaaatt gctgatgaat
      541 cactctcaac gtataaactc aaacaacctc cagaaagtga aaatagctca aaagtgaaaa
      601 tgttgctcga aaagcacaaa actttgcata cagctttact aatcttggtt cttcttggta
      661 cttgtatggt aatcggagat ggattactta ctccagccat atctgttttt tcggcggttt
      721 ctgggcttga gttatcaatg tctaaagaac accatgaata tgccgtgata ccgattacct
      781 gtttcatatt agtgtgccta tttgcgctcc aacattatgg cacacatcga gtgggtctgt
      841 tttttgctcc aatagttctg ttgtggttgt tatgcatcag tggacttgga ttatacaata
      901 tattttattg ggacccacat gtttacaaag cactttcgcc ctattatatg tataagtttt
      961 tgaagaagac aaagaaaaga gggtggatgt ctttgggagg cattttgctg tgcatcacag
     1021 gatcggaagc aatgtttgct gatcttggtc acttctcata ttctgcaatt cagattgctt
     1081 tcaccttcct tgtatatcct gcactaatac taggttacat gggacaagcc gcttacttgt
     1141 caaaacatca ccaaatgaca cacaatatta gctattatgt ttcggtgcca gaaagtgtaa
     1201 ggtggccggt gcttgttatt gctattcttg cgtctgttgt cgggagtcaa gcaatcataa
     1261 gtggaacatt ctcgatcatt aaccagagtc aatcattagg ttgttttccg agagttaagg
     1321 ttgttcatac atctgacaag aaacacggtc agatttacat accggagatc aactggatac
     1381 tcatgatcct atgcattgct gtcaccattg gattcaggga tacaaaacac atgggaaacg
     1441 catcaggatt ggcagttatg gcggtaatgc tcgttacaac ttgcttgatg tcattagtga
     1501 ttattctttg ttggcataaa cctccgattt tggctctttg tttcctacta ttcttcgggt
     1561 caatcgaatt actctatttc tcggcttctt tagtcaagtt tcgtgaaggt gcatggctcc
     1621 cacttctctt agcactattt ctcgttaccg taatgttcgt ttggcactac gcgactacca
     1681 aaaagtacga atatgatctt caaaataagg tctcgttaga atggttacta gctttaggtc
     1741 caagtttagg tatgtctagg gtccccggga tcgggctcgt gtttacggat ctcacatcgg
     1801 gtataccggc taacttttca cggttcgtga ctaatcttcc tgcgtttcac tgtattttgg
     1861 tgtttgtgtg tgtgaaatct gtacctgttc cttttgttcc tagagctgag aggtacctta
     1921 tgggtcgagt gggacccgcg agtcttaggt cgtataggtg tattgtacgg tatgggtatc
     1981 gtgatgttca tcaggatgtt gattcgtttg aatctgaact tgcgaaccgg atcgctgact
     2041 ttatccgtta tgactggtcc cgccctgaac tcactactga tccaggtaac gaagataacg
     2101 ggctaccatc aagcagatcg tcaggggaat atcggcttgc cgtaatagga aactcagact
     2161 tttcgacatc tcggcctttt gaatcagaac aaagtatgca acaagttagt gtatctgtcg
     2221 ggttttcaac aatcgagagc gtaacgggca taatcgaaaa tgacccgcaa ctaaaaagga
     2281 gggtaacatt tgccattgat gatcacaatg attctgacga tccaaaagac gtgcagatga
     2341 gagaagaact taacgattta tttgatgctc aacaaagtgg aactgcattt atacttggcc
     2401 actcgcacgt gaaagcaaca caaggatcgt cggtttttaa gaggttagcg attaattttg
     2461 cgtataattt tcttagacga aattgtaggg gaccggatgt ggtgctaaag gtgcctccag
     2521 catctttgtt agaagttggc atggtttatg ttgtataaaa cttattaata caaatcatct
     2581 tgatttatat atgattgtac atttctctct gataatggat gttatcaaat tgcag
//
LOCUS       XR_011757164             401 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839951), transcript variant X1, ncRNA.
ACCESSION   XR_011757164
VERSION     XR_011757164.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..401
                     /gene="LOC139839951"
                     /note="uncharacterized LOC139839951; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839951"
     ncRNA           1..401
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839951"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139839951"
ORIGIN      
        1 agaacatgtg gcagccgttt cattggctga ccactccgta tctcgtattg tgataaaaga
       61 gttgccatca ttgcacctca tccgggacta ttttttcaag gatgaaacat aacatcctta
      121 catccgttta gaagactaca cagatacgag tcagtgggtt atgcacaaac tacatggatt
      181 aaagcttaac gtacgagttg tttaatgttg ttgcatggat tgacgtatct tatttggtta
      241 ttgttgttgc tgatacaatt gcttttaaaa caagacactt tcaccccaag actgggcttc
      301 aacaaaattc gatcctagac ctgtaagtca aattctgtta tatatctata cgccttttac
      361 tttcatttag gatgtgtgcc ttttagcata tccttttacc g
//
LOCUS       XR_011757165             337 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839951), transcript variant X2, ncRNA.
ACCESSION   XR_011757165
VERSION     XR_011757165.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..337
                     /gene="LOC139839951"
                     /note="uncharacterized LOC139839951; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839951"
     ncRNA           1..337
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839951"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139839951"
ORIGIN      
        1 tagttgttac catttgaacg gatatcaggt agctttcaag atctattgta ccatattgaa
       61 tccttgcagg actacacaga tacgagtcag tgggttatgc acaaactaca tggattaaag
      121 cttaacgtac gagttgttta atgttgttgc atggattgac gtatcttatt tggttattgt
      181 tgttgctgat acaattgctt ttaaaacaag acactttcac cccaagactg ggcttcaaca
      241 aaattcgatc ctagacctgt aagtcaaatt ctgttatata tctatacgcc ttttactttc
      301 atttaggatg tgtgcctttt agcatatcct tttaccg
//
LOCUS       XM_071830168            1002 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ferritin-3,
            chloroplastic-like (LOC139839952), mRNA.
ACCESSION   XM_071830168
VERSION     XM_071830168.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1002
                     /gene="LOC139839952"
                     /note="ferritin-3, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139839952"
     CDS             21..776
                     /gene="LOC139839952"
                     /codon_start=1
                     /product="ferritin-3, chloroplastic-like"
                     /protein_id="XP_071686269.1"
                     /db_xref="GeneID:139839952"
                     /translation="MLLRVPTTFPILTGATADDNSGRSLFLSSSSSSFSTPSSVICAA
                     VKGGSSNHKPLSGVVFEPFEEVKKELNLVPSVPQQSLARQKYADDSEASINEQINVEY
                     NVSYVYHAMYAYFDRDNVALKGLAKFFKESSEEEREHAEKFMEYQNKRGGKVKLQSII
                     MPLSEFNDEEKGDALYAMELALSLEKLTNSKLLNLHEVANRNNDVQLADFVESEFLGE
                     QVEAIKKISEYVAQLRRVGKGHGVWHFNQMLLN"
     misc_feature    282..761
                     /gene="LOC139839952"
                     /note="eukaryotic ferritins; Region: Euk_Ferritin;
                     cd01056"
                     /db_xref="CDD:153114"
     misc_feature    order(321..323,342..344,423..428,435..437,573..575,
                     675..677)
                     /gene="LOC139839952"
                     /note="ferroxidase diiron center [ion binding]; other
                     site"
                     /db_xref="CDD:153114"
     misc_feature    order(411..413,420..425,432..434)
                     /gene="LOC139839952"
                     /note="ferrihydrite nucleation center [active]"
                     /db_xref="CDD:153114"
     misc_feature    order(606..608,645..647,654..656)
                     /gene="LOC139839952"
                     /note="iron ion channel [active]"
                     /db_xref="CDD:153114"
     polyA_site      1002
                     /gene="LOC139839952"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttcccctgt ttcaataatc atgcttctca gagtacctac tacctttcct atactgaccg
       61 gagctaccgc cgatgataat tccggtcggt cgctgttctt atcatcatca tcatcttctt
      121 tttcgacacc gtcgtcggtt atttgtgcgg cggtgaaagg tggttcgtca aatcataaac
      181 cactttctgg ggttgtgttt gaaccatttg aggaagtgaa aaaagagctt aatttagttc
      241 cttctgttcc tcaacagtct cttgctaggc agaaatatgc tgatgattct gaagcttcca
      301 tcaatgagca aatcaatgtg gagtacaatg tttcgtatgt gtaccatgct atgtatgcct
      361 actttgatag ggataatgtt gctctcaagg gcttagcaaa attctttaag gagtctagtg
      421 aagaagaaag ggaacatgct gagaaattca tggagtatca gaacaaacga ggtggaaagg
      481 tgaagttgca atctattata atgccattat ctgagtttaa tgatgaagag aaaggagatg
      541 cattgtatgc catggagctt gcattgtcac tggagaagtt gactaattcg aagcttttaa
      601 accttcatga ggtagctaac aggaacaatg atgtgcaact agctgatttt gtagaaagtg
      661 agtttcttgg tgaacaggtt gaagctatca agaagatatc cgagtatgtt gctcaactac
      721 gaagagtcgg caaggggcat ggtgtttggc actttaacca gatgctattg aattaagatg
      781 ctgcagcctg atgaattgtc ttaatgtatc cttgttcttt ctagaggatg taatctactt
      841 gtaggttaga gattgtggaa atttttagat aagggtaact ttgtgtggct ggttatgaaa
      901 ttagtcatct aaacctataa tggtatgaaa aatatgtttg ttttaaactt cgaatatgtt
      961 tttctctttc gtatgaaaaa tatgtttgtt ttaaacttcg aa
//
LOCUS       XM_071830169            2025 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839953), mRNA.
ACCESSION   XM_071830169
VERSION     XM_071830169.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2025
                     /gene="LOC139839953"
                     /note="uncharacterized LOC139839953; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139839953"
     CDS             59..1630
                     /gene="LOC139839953"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686270.1"
                     /db_xref="GeneID:139839953"
                     /translation="MAKENDPISDVIEDDEVVEESSNEDEEEEDDDEFYDDDEEEPEL
                     LQTPESKLRSERAKMNSTLHRISTERVPLRVHDVLIKGNNKTKESLIETEIQTLKTAT
                     SIQELLQAATIVNARLQKLDIFDSVNITIDSGPPELPGTSNVIVEVVEAKNPITGDIG
                     IFTKPEARSWSLEGSLKLKNLFGYGDLWDGSLSYGWDQTSEVSVGVSLPRFMRLFTPV
                     MARVSLLSQDWLKFSSYKEQALGLSLGLVSTKYHDLAYNLSWRTLTDPSQMASKSIRR
                     QLGHGLLSHLKYTFKIDKRNSPLRPTKGFAFVASSQLGGIYPDYRSLRFIRQEFDLRY
                     ALPLGFARAALNFGVAGGVLFPWGSEFMNTPTSLPNRFFLGGNSSPVCTLGGPTSLLG
                     FKTRGLGPSESKREVKTNSEDATSERDFLGGDLAVTAFADLSFDLPLKVLRDSNIHAH
                     AFACAGSLTKLTENAFRDLSFQKYRDSFRSSAGFGLIVPTKLFRMEVNYCYILRQHEH
                     DRAKTGVQFSFSSPL"
     misc_feature    <260..1624
                     /gene="LOC139839953"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; Region: BamA; COG4775"
                     /db_xref="CDD:443807"
     polyA_site      2025
                     /gene="LOC139839953"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaatacata gtgatactgt agtgtgatcc gcatacaaaa tcaaatcaaa ataaaaaaat
       61 ggcgaaagaa aacgatccaa tttcagatgt aattgaagac gacgaagtag ttgaagaatc
      121 atctaacgaa gatgaagaag aagaagatga tgatgaattc tacgacgatg atgaagaaga
      181 accagaattg ttacaaacac cggaatcaaa attgagatct gaaagagcaa aaatgaattc
      241 aactcttcac cggatttcaa ccgaacgggt tccattacga gtacacgatg tattaattaa
      301 aggaaataac aaaactaaag aatcgttaat tgaaactgaa attcaaaccc taaaaactgc
      361 tacgtcaatt caagagttac ttcaagctgc gacgattgtg aatgcgcggc tacagaagct
      421 agatattttt gattcggtga atattactat agattcagga cctcctgaat tgcctggaac
      481 tagtaatgtg attgttgaag ttgttgaggc taaaaaccct atcactggtg atatcggcat
      541 ttttacgaaa cctgaggcta gatcttggtc acttgaggga tcactaaagc ttaaaaactt
      601 atttgggtat ggagacctat gggacggttc tttatcttat ggttgggacc aaacatcaga
      661 agttagtgtt ggtgtatctt tacccagatt catgagatta tttactcctg ttatggcccg
      721 tgtatctctg ctttctcaag attggctgaa gttctcctca tacaaagagc aagcacttgg
      781 cctatcttta gggctggtat cgaccaagta ccatgaccta gcatataatc tctcttggcg
      841 caccttgacc gacccgtctc aaatggcttc gaaatcaata aggaggcaac ttgggcatgg
      901 gctgttatct catttgaagt acacgtttaa gattgataag aggaactcac cacttagacc
      961 gactaaaggg tttgcttttg ttgctagttc tcagcttggt ggcatttatc ctgattatcg
     1021 tagcttgcgt tttattcgcc aggagttcga tcttcgttat gctttgccat tgggttttgc
     1081 ccgtgctgca ctgaactttg gtgttgctgg tggagtactt tttccatggg gtagtgaatt
     1141 tatgaataca ccaacatcct tacctaatcg ttttttcttg ggtggtaact cttctccagt
     1201 gtgcacattg ggtgggccca catcattatt gggctttaag actaggggat tgggcccaag
     1261 tgagtccaaa agggaagtaa aaacaaattc tgaagatgca acttctgaaa gggattttct
     1321 tggtggagat ttggctgtta cagcctttgc agacctttct tttgatcttc cattgaaggt
     1381 tttgagagat tctaatattc atgcacatgc gtttgcttgt gctgggagtc taaccaaatt
     1441 aaccgagaat gcatttcgag atctctcttt tcagaagtac cgagattcat tcagaagctc
     1501 tgcaggattc ggacttattg taccgactaa gctatttcgc atggaggtca actactgcta
     1561 catactgaga caacatgaac atgatcgagc caagactggt gtgcagttta gcttttcttc
     1621 acctttatag agccatggtt tagtcaagtg ccaccaatct cgagctgaca gttttgtttg
     1681 tacttggaag caaaccttcc gtattcaaac atcacgagat cctggccagc tcaagggttc
     1741 ttgtaatttt taaacttaag accaattcac gatacaccaa agtacagaaa aataaaactc
     1801 atgcaccttt gctcgatgaa aggctgaaat tgccaatctt gaccgcatga ttggtatttt
     1861 gaccatgctt tatgttaaaa taaaaagtag agctacggaa tggtgttatt tgttgttttt
     1921 tcccctcttg tgttccggaa tcgtggtatc attgttttgc ttctttattg tgtgatattt
     1981 ggtctgctag tgttatacaa catactgaac tgaacttttt cggta
//
LOCUS       XM_071830170            1926 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            mitochondrial-processing peptidase subunit beta, mitochondrial
            (LOC139839954), mRNA.
ACCESSION   XM_071830170
VERSION     XM_071830170.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1926
                     /gene="LOC139839954"
                     /note="probable mitochondrial-processing peptidase subunit
                     beta, mitochondrial; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139839954"
     CDS             117..1703
                     /gene="LOC139839954"
                     /codon_start=1
                     /product="probable mitochondrial-processing peptidase
                     subunit beta, mitochondrial"
                     /protein_id="XP_071686271.1"
                     /db_xref="GeneID:139839954"
                     /translation="MATRHLLKLSRRSHRPLTTTTTRSASTATAAAVSSISDTTPSPP
                     PPNQMIYDRIAEQVKSKLKKLDNPDDKFRIHNSPFPTLTNHTSILTYPETRVTTLPNG
                     LRVATESNLASQTATVGVWIDAGSRFETEENNGVAHFLEHMIFKGTEKRSVRGLEEEI
                     ENMGGHLNAYTSREQTTYYAKVMGGDVPKALDILSDILQNSTFDEKLINRERGVILRE
                     MEEVGAQNEEVIFDHLHATAFQYTPLGRTILGPEENIKKITKNDIQDYISTHYSPHRM
                     VISASGAVKHEDLVEQVKKMFTKLSANPLTTKQLVEKEPSIFTGSEVRMRDDDEPLAQ
                     FAVAFNGASWTDPDSIALMVIQSILGSWNKSAGAGKHMGSQLAQLIGISELAENMMAF
                     NTNYKDTGLFGVYAVAKPDCLDDLAYAIMEEITKLCYIVRDDDVIRAQNQLKSSLLLH
                     IDGSSPTAEDIGRQLITYGRRIPFAELFARIDAVDADTIKRVAKRFVFDQDIAIAASG
                     PVKLLPDYNWFRRRTYMLRY"
     misc_feature    390..1649
                     /gene="LOC139839954"
                     /note="Predicted Zn-dependent peptidase, M16 family
                     [General function prediction only]; Region: PqqL; COG0612"
                     /db_xref="CDD:440377"
     polyA_site      1926
                     /gene="LOC139839954"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctgtgactc ccttgtttat tataccatct tcttcatgac ttaaactcac cccaacccta
       61 acaacatccc aatctcactt cacctcctga atcacaaaca cacgcgcacg cacaccatgg
      121 cgacgcgcca cctccttaag ctctcccgcc gatctcaccg tcctctcacc accacaacca
      181 ccagatccgc ttcaactgcc accgccgccg ccgtatcatc catctccgac accacaccat
      241 caccgccacc tccaaaccag atgatatacg atcgtattgc tgaacaggtc aaatcaaagc
      301 ttaagaaact cgataacccg gacgataagt tccgaataca caactcacct tttccaaccc
      361 taaccaatca cacatctatc ttaacctacc ctgagacacg tgtcaccact ctacctaacg
      421 gtctacgtgt cgcaactgaa tcaaacctag cttcacaaac ggcaaccgtt ggtgtttgga
      481 ttgatgctgg ttcgagattt gaaaccgaag agaataatgg cgtggcgcat tttttggaac
      541 atatgatatt taaagggact gaaaaaaggt ctgttagagg tttagaagag gagattgaga
      601 acatgggagg ccatttgaat gcttatactt caagagaaca aacaacttat tatgctaaag
      661 ttatgggtgg tgatgtgccc aaggcgttag atatattatc agatattttg cagaattcga
      721 ctttcgacga gaagttgatt aatcgcgaac gtggtgtgat tcttcgcgaa atggaagagg
      781 tgggagcaca gaatgaggag gtaatatttg atcatttgca tgctactgct tttcaataca
      841 cccctcttgg taggaccatt cttggacctg aagaaaacat caaaaagata acaaagaacg
      901 acattcaaga ttacatttca acccattatt cccctcacag aatggtaatt tcagcatctg
      961 gagccgttaa gcatgaggac cttgtagagc aggtaaagaa gatgttcacg aaattatctg
     1021 ctaatccctt gactacaaaa cagttggtag aaaaggagcc ttcaatattt accggatcag
     1081 aggttcgaat gagggatgat gatgaacctc ttgctcaatt tgccgttgcc ttcaatgggg
     1141 cttcatggac agatccagat tctattgctt tgatggtcat acaatctata cttggatcat
     1201 ggaacaaatc tgcaggagct ggcaaacata tggggtcaca gctcgctcag ctgatcggaa
     1261 ttagtgaact ggctgagaac atgatggctt ttaacaccaa ttataaagat actggactat
     1321 ttggcgtcta cgctgttgct aagcccgatt gtttggatga tttggcttat gcaataatgg
     1381 aagagataac caaactatgt tacatagtca gagatgatga tgtcatacgt gctcaaaatc
     1441 agcttaaatc gtcattgctt ctacacatcg atggatccag ccctactgct gaagacattg
     1501 gacgacagtt gattacatat gggcgtagga tcccatttgc tgagttattc gcaagaattg
     1561 atgctgtcga tgctgacacc attaaacgtg tagccaagag attcgtattt gaccaggaca
     1621 tcgcaattgc agcatctggg ccagtgaagc tattgccgga ctataattgg ttccgtcgcc
     1681 ggacttacat gctccgttac tagatcattg gtttgtttta tttatgttct cttccatttt
     1741 taccctcgat ctcggagcac gaggcatgtg atttcccaaa tgtatcatcc attttttata
     1801 tattcataat ttaaagtaat aatacgatac gatatcatca tttctgcgtc tttatagcag
     1861 tgacgtttat tcagctttta ttctggattc aatattaatg cataacacaa agtagatctt
     1921 gtttca
//
LOCUS       XM_071830171             968 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein 1-like (LOC139839956), mRNA.
ACCESSION   XM_071830171
VERSION     XM_071830171.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..968
                     /gene="LOC139839956"
                     /note="polyadenylate-binding protein 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139839956"
     CDS             18..692
                     /gene="LOC139839956"
                     /codon_start=1
                     /product="polyadenylate-binding protein 1-like"
                     /protein_id="XP_071686272.1"
                     /db_xref="GeneID:139839956"
                     /translation="MEQTDQDQEHEVYGGDIPDESEMDADIEMSRNDTEVDENNNSKE
                     LEDMKKRLKEIEEEAGALREMQAKVEKEMGSVQDDSTGAAATLAEKEEADARSIYVGN
                     VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVELEAVQNAVLLNESEL
                     HGRQLKVAAKRTNVPGLKQFRGRRPNPYLGFNPRRPYFGGLPMYSPYGYGRIPRARRP
                     MRYRPY"
     misc_feature    108..>620
                     /gene="LOC139839956"
                     /note="splicing factor, CC1-like family; Region: SF-CC1;
                     TIGR01622"
                     /db_xref="CDD:273721"
     misc_feature    306..518
                     /gene="LOC139839956"
                     /note="RNA recognition motif in type II
                     polyadenylate-binding proteins; Region: RRM_II_PABPs;
                     cd12306"
                     /db_xref="CDD:409747"
ORIGIN      
        1 atcggaagtt gaaagtaatg gaacaaacag atcaagatca agaacacgaa gtgtacggag
       61 gagatatacc tgatgaaagt gaaatggatg ctgatattga gatgtcacgt aacgatacgg
      121 aagtcgatga gaataataac tccaaggaat tggaggatat gaagaagaga ctgaaggaga
      181 ttgaagaaga agcaggagca cttagagaaa tgcaagctaa agttgagaag gagatgggct
      241 ctgttcaaga tgattccact ggggctgctg caactctggc tgaaaaagag gaggcggatg
      301 cacgttcaat ttacgttggt aatgtagact atgcatgtac gcctgaggag gttcagcagc
      361 attttcaatc atgtggaact gtaaacaggg tgacaatatt aacagacaaa tttggtcaac
      421 caaaaggttt tgcatacgtt gaatttgtgg aacttgaagc tgttcaaaat gctgttcttt
      481 tgaatgaatc ggagttgcat ggtcgccaac tcaaggttgc tgctaaacga actaatgttc
      541 ctggattgaa acaatttaga gggaggcgac ccaacccata tcttggattc aatccacgaa
      601 ggccttactt tggtggactt ccaatgtact ctccatatgg ttatggaagg attccaagag
      661 ctaggaggcc aatgcgttac cggccatatt aatcaagtca ccgagtgttt tttagtgacc
      721 gcaagaggca acagtcatac cgaattttac ttgaccgtct ctgtagtctt agatcatgtg
      781 tatcacatta tgtactattg cttgcgttgc caaatccccc aacattcttc tttagctttc
      841 tttttcaaga tctttattgt atgcacttta acatgctttt atacccagaa ctcatagtca
      901 tcatagtccc aaaaaatgac ctttaaactg tttttatcta gtttctatga tctatggaag
      961 tgatgtgt
//
LOCUS       XR_011757166             431 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839957), ncRNA.
ACCESSION   XR_011757166
VERSION     XR_011757166.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..431
                     /gene="LOC139839957"
                     /note="uncharacterized LOC139839957; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839957"
     ncRNA           1..431
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839957"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839957"
ORIGIN      
        1 agcaagggat tcatgtggtg agcaaaaaat acctatggtt agtcgaagac tttgctaaat
       61 tgaatgacta cccgtggggt aatcgtattt gggatgccac ttaccccgta gttaaagatg
      121 gatttcaagc tcgggaaagt cagttagagg tcggaaaggg ttatactttg gcgggtttta
      181 tgtggtcatt taagatttgg attcttgagg catatcgacg aaccattaaa agttttgccc
      241 acaagacaga caaaaatgga gtaccgaggg ccttattttg gaaacgttca tcggctgagt
      301 ctttttcagt cactaattac ctgcatctac taaacgttat ggatgattgt ccgaagaata
      361 aacgaccttt tcgtactcta catcccactg atgttgagag tggatgtcaa tggtggataa
      421 aaagttgcca a
//
LOCUS       XM_071830172            1162 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome non-ATPase
            regulatory subunit 14 homolog (LOC139839958), mRNA.
ACCESSION   XM_071830172
VERSION     XM_071830172.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1162
                     /gene="LOC139839958"
                     /note="26S proteasome non-ATPase regulatory subunit 14
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 15 Proteins"
                     /db_xref="GeneID:139839958"
     CDS             39..977
                     /gene="LOC139839958"
                     /codon_start=1
                     /product="26S proteasome non-ATPase regulatory subunit 14
                     homolog"
                     /protein_id="XP_071686273.1"
                     /db_xref="GeneID:139839958"
                     /translation="MSGMERLQRMFGGAGGSLGHPPPDSPSLDTSEQVYISSLALLKM
                     LKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDML
                     KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVI
                     DAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEK
                     MLLNLHKKKWTDGLTLEPFDTHSKTNEQTVQEMLGLAIKYNKAVQEEDELSPEKLAIA
                     NVGRQDAKKHLEEHVSNLMSSNIIQTLGTMLDTVVF"
     misc_feature    105..905
                     /gene="LOC139839958"
                     /note="Mov34/MPN/PAD-1 family: proteasomal regulatory
                     protein Rpn11 and signalosome complex subunit CSN5;
                     Region: MPN_RPN11_CSN5; cd08069"
                     /db_xref="CDD:163700"
     misc_feature    order(201..203,384..386,390..392,414..416,423..425)
                     /gene="LOC139839958"
                     /note="MPN+ (JAMM) motif [active]"
                     /db_xref="CDD:163700"
     misc_feature    order(384..386,390..392,423..425)
                     /gene="LOC139839958"
                     /note="Zinc-binding site [ion binding]; other site"
                     /db_xref="CDD:163700"
     polyA_site      1162
                     /gene="LOC139839958"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcaaatttct gatcagaaaa aataaatcgg tgaagaaaat gtcaggaatg gaacgactac
       61 agcgaatgtt cggtggcgcc ggcggctctt taggtcaccc gccgccagat tcaccgtctt
      121 tggatacatc agaacaagtt tacatctctt cactcgcttt attaaaaatg ctcaaacacg
      181 ggagagctgg agtgcctatg gaagtgatgg gattgatgct tggggaattt gtggatgaat
      241 atacggttcg tgttgtcgat gtatttgcga tgccgcagag tggtactggt gttagtgttg
      301 aagctgttga tcatgttttt caaactaata tgcttgatat gcttaaacaa accggaagac
      361 ctgaaatggt agtcggatgg taccattcac atcccggatt tggttgttgg ttatctggag
      421 ttgacataaa cacacagcag agttttgaag ctctaaatca acgagcggtt gcagtggtgg
      481 tggatccaat tcagagtgtt aaagggaagg ttgtgataga tgcctttcgc ctaattaacc
      541 ctcaaaccat gatgcttgga caagagcctc gccagacaac atccaatctt ggccacctca
      601 ataaaccatc tatccaagca ctgatccatg gtttgaacag gcattattac tcgatagcca
      661 tcaattatag gaaaaatgaa cttgaggaaa agatgctatt gaacctgcac aagaaaaagt
      721 ggacagatgg acttacactt gaaccatttg atacacattc gaaaactaat gagcagactg
      781 tccaggaaat gttgggtcta gctattaagt ataacaaagc ggttcaggaa gaggacgaat
      841 tatccccaga gaaacttgca attgcaaacg ttggaaggca ggatgccaag aagcatctgg
      901 aagagcatgt atctaactta atgtcatcca acatcattca gacactcggt accatgctcg
      961 acacagttgt cttctaaatg tcacttatgt tttcaaacgt atcgtgtacc ttaacgactt
     1021 tctagataag gtctttgttt atcaggctat gactttttat ttgtaattgt tatgttatgg
     1081 tacaaattct ggatattgct cttcaaagtt ttctttgata tcaacttgct ttcgttaaat
     1141 gaaaaactca tatcttgtat ga
//
LOCUS       XM_071830174             807 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839959), mRNA.
ACCESSION   XM_071830174
VERSION     XM_071830174.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..807
                     /gene="LOC139839959"
                     /note="uncharacterized LOC139839959; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839959"
     CDS             1..807
                     /gene="LOC139839959"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686275.1"
                     /db_xref="GeneID:139839959"
                     /translation="MDFGSVFNYWELDRDFGLGVWIFGFFKMFVDILSLLVLFYFSLK
                     DLHFNETNFAFFRRIVNRLCLRSFDSNTNTKMSSCKCGLKNFLNTSNPPMIEKWEVVK
                     ETINCKEDNLFDDDKQEKCDEDEVVDLLTLRRLIKMERKRANDAYVELEKERMSSTTA
                     SEEAMAMVLRLQNQKSVLEMEARQLKRLAHEKQLHDQEVIQSLRWIVMKHESERSILE
                     DRLRLCKQRLTFCMNDEGDDGRERVHRSISCLDGLDEGLVSSLDLGLSPW"
     misc_feature    391..663
                     /gene="LOC139839959"
                     /note="Region: Zein-binding; pfam04576"
                     /db_xref="CDD:428019"
ORIGIN      
        1 atggactttg gctcagtttt taactattgg gagttggata gagattttgg tttaggggtt
       61 tggatatttg gatttttcaa aatgtttgtg gatatactga gtcttttagt tttgttctat
      121 tttagtttaa aggatttgca cttcaatgag accaatttcg cgttttttag gaggattgta
      181 aatcggcttt gcttaagaag ttttgattca aacactaata caaagatgtc aagttgcaaa
      241 tgtgggttga agaacttttt gaatacttca aatccaccca tgattgagaa atgggaagtt
      301 gttaaagaaa ctataaattg taaagaagac aacctatttg atgatgacaa acaagagaaa
      361 tgtgatgaag atgaagtagt tgacttattg actttgagaa gattgatcaa gatggagagg
      421 aaacgagcga atgatgctta cgtggagcta gagaaagagc ggatgtcatc caccactgcc
      481 tctgaggagg caatggcaat ggttttacgt cttcagaatc aaaaaagtgt gcttgaaatg
      541 gaagcgcgcc aacttaaaag attagctcat gaaaaacaac ttcatgatca agaggttatt
      601 caatccttga ggtggattgt gatgaaacat gaatcggaaa gaagtatatt agaagatcgt
      661 ttgagattgt gtaaacaaag attgacgttt tgtatgaacg atgaggggga tgatggacgc
      721 gaaagagttc atagatcaat aagttgtctt gatggtcttg atgaagggct tgttagttct
      781 cttgatttgg gtttatcgcc ttggtaa
//
LOCUS       XM_071830175             852 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tobamovirus multiplication
            protein 3-like (LOC139839960), mRNA.
ACCESSION   XM_071830175
VERSION     XM_071830175.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..852
                     /gene="LOC139839960"
                     /note="tobamovirus multiplication protein 3-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139839960"
     CDS             1..852
                     /gene="LOC139839960"
                     /codon_start=1
                     /product="tobamovirus multiplication protein 3-like"
                     /protein_id="XP_071686276.1"
                     /db_xref="GeneID:139839960"
                     /translation="MGGVLLGSYNDVTVTYVFKTLYGWWDEFNNNSQISQDLILHVLA
                     AFYGIVALVALVQLIRIQVRVPEYGWTTQKVFHFLNVLVNGVRCLIFVFHHDVEQLKP
                     EIVQHILLDVPSLVFFTTYAPLVLLFAEIYYQARNGSSDGLRPTFFAINGIIYAVQIV
                     LWLVIWWRPIAPLVILAKMFLAGVSLFVALGFLVYGGRVFLMLQRFPVKSKNRRKKLQ
                     EVGYVTTICFVCFLLRCIVMCFNAFDEAANLHLMDHSVLNFVYYLLVEILPSSLLLII
                     LRKLPPK"
     misc_feature    67..849
                     /gene="LOC139839960"
                     /note="THH1/TOM1/TOM3 domain; Region: THH1_TOM1-3_dom;
                     pfam06454"
                     /db_xref="CDD:399452"
ORIGIN      
        1 atgggtgggg ttttacttgg atcgtataac gatgtaacgg tgacgtacgt ctttaaaacc
       61 ctttatggat ggtgggatga attcaataat aattcccaaa tttctcaaga tttgatcctt
      121 catgttcttg ctgcttttta tggaattgtc gcccttgttg ctctggtaca attaattaga
      181 atacaagtaa gagtacccga gtatggttgg accacccaga aagtcttcca tttcctcaat
      241 gtcttggtta atggagttag atgtttaatc tttgtatttc atcacgacgt tgaacagttg
      301 aagccagaga ttgtgcaaca tatattgctt gatgttccaa gtcttgtgtt tttcactacg
      361 tatgctcctt tagttttgtt atttgcagaa atttactatc aggcaaggaa cggttcttct
      421 gatggtctcc ggccaacgtt tttcgcaatt aatggaatca tttatgcagt tcagatagtc
      481 ttatggttgg taatttggtg gagacctatc gctccattgg tgattctcgc caagatgttt
      541 cttgcaggtg tgtccttgtt tgtagccttg ggttttctag tttacggagg aagggtgttt
      601 ttaatgttgc aacgttttcc tgtgaaatct aaaaaccggc gaaagaagtt acaagaggtt
      661 ggctacgtga ccacaatctg ctttgtctgt tttctcctaa gatgtatcgt gatgtgcttc
      721 aatgcatttg atgaagctgc taacctgcat ttgatggacc attctgtcct gaatttcgta
      781 tactacctgt tggtggagat actaccgtcg tctctacttc tcattatatt gagaaaatta
      841 ccacctaagt ga
//
LOCUS       XR_011757167             595 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839961), ncRNA.
ACCESSION   XR_011757167
VERSION     XR_011757167.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..595
                     /gene="LOC139839961"
                     /note="uncharacterized LOC139839961; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839961"
     ncRNA           1..595
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839961"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839961"
ORIGIN      
        1 gtttaaaatg gaaaagtagc tggaaacagg gggttgcgcg ccgcgcaaag ggagggcgcg
       61 ccgcgcaaaa cgctggtgac agctctcctt gttttattta atttaaacga tgggcatttc
      121 ggtaaattca cttcaaggcc ggatttaatg cttggatcag tagtttggga gttcaattac
      181 tcccttgttc accaacctta tcctcccaat tcattttagt gagagagagt gggatattag
      241 agagagagat cccattttga agaagaagaa ggaggtttct tgctaaagtt caagttctaa
      301 agttgttcat ctacttccta gctacatttt gattgtggtg gtacgattgc tttgaagatc
      361 ggaagtgcat aatcatcatc ttggcgctaa ggttcgtgtg tggataaggg taagggcatt
      421 accttggatt aagtttcccg ctttgatgat taggaagcgc ttttggcttt ggcttggagt
      481 ttgaccgaga cttgggtagt ttaaccccaa acaccatgct cgttgtgtcg tttggcaatt
      541 aaactttttg tggtcgaaac tctaatttgt attaaatttg tatttttaca cttag
//
LOCUS       XM_071830176            7539 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pre-mRNA-processing-splicing
            factor 8A (LOC139839962), mRNA.
ACCESSION   XM_071830176
VERSION     XM_071830176.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7539
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..7539
                     /gene="LOC139839962"
                     /note="pre-mRNA-processing-splicing factor 8A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139839962"
     CDS             213..7325
                     /gene="LOC139839962"
                     /codon_start=1
                     /product="pre-mRNA-processing-splicing factor 8A"
                     /protein_id="XP_071686277.1"
                     /db_xref="GeneID:139839962"
                     /translation="MWNNNNGESMWNNNGMIAPPGTGGPPPLAPPGTGGAGGSIPPPP
                     AAQPSYNVLPSPAEAEARLEEKARKWMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKI
                     IKDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRDVKVLYHITGAIT
                     FVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDV
                     DPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLHRLAGQ
                     LLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKL
                     IIRSPLRTEYRIAFPHLYNNRPRKVRLCVYHTPMVMYIKTEDPDLPAFYYDPLIHPIT
                     SANKDRRDKKIEDEEDDDDFCLPEGVEPLLTSTPLYTDTTAAGISLLFAPRPFNMRSG
                     RMRRAEDIPLVSEWFKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKKKHLFR
                     SLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTT
                     KERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYTFSHVGQLTG
                     MYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLL
                     ERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKA
                     RTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRG
                     ATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKF
                     SPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSR
                     IKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPN
                     WIKPADSEPPPLLVYKWCQGINNLQGVWDTGDGQCVVMLQTKFEKFFEKIDLTMLNRL
                     LRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLG
                     LTRASEIAGPPQMPNEFITFWDTKVETRHPIRLYSRYIDKVHILFRFTHEEARDLIQR
                     YLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEW
                     ENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAV
                     AFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELL
                     DLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYS
                     QQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNR
                     RLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQR
                     HDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKK
                     LTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQ
                     IFRAHLWQKVHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFA
                     AHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDN
                     MSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRK
                     GLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAI
                     FIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTR
                     KGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKASEPQMVLFNIYDDW
                     LKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPSLTDDQWVKVEV
                     ALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQL
                     TAVTTRTTNVHGDELIVTTTSPYEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDI
                     KQTGYTYIMPKNILKKFICIADLRTQIAGYLYGVSPPDNPQVKEIRCIAMPPQWGTHQ
                     QVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKSII
                     LTCSFTPGSCSLTAYKLTPTGYEWGRANKDTGSNPHGYLPTHYEKVQMLLSDRFLGFY
                     MVPDNGPWNYNFMGVKHTVSMRYGIKLGTPREYYHEDHRPTHFLEFSNLEEGDVAEGD
                     REDTFS"
     misc_feature    333..7322
                     /gene="LOC139839962"
                     /note="U5 snRNP spliceosome subunit [RNA processing and
                     modification]; Region: PRP8; COG5178"
                     /db_xref="CDD:227505"
     polyA_site      7539
                     /gene="LOC139839962"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacgctctca ctactgtacc gtgacccgaa accctagcta gcgccattaa aaacctcaca
       61 aatacacctt ctcgctccta attaatcctt acaatccctt tatctcgtta catcaatcac
      121 acgcacttcc acttgcggta gatttctctt aaaatctcgt ctcaatctcg ttatcactat
      181 ttctagggtt tatggttagg ttttaagtaa tcatgtggaa taacaacaac ggtgaatcga
      241 tgtggaataa taacggtatg attgcacctc cgggtactgg tggtccaccg ccgttagcgc
      301 cgccgggtac tggtggtgct ggtggctcaa taccaccacc gcctgctgct caaccgtcgt
      361 ataatgtgtt accttctccg gctgaagcgg aagccaggtt agaagaaaaa gcgaggaagt
      421 ggatgcagtt gaactctaaa cgttatggtg ataaaaggaa atttggtttt gttgagactc
      481 agaaggaaga tatgcctcct gaacatgtta ggaagataat taaggatcat ggtgatatgt
      541 catcaaaaaa atatagacat gataagcgtg tatacctagg ggctcttaag tttgttcctc
      601 atgcagttta caagcttcta gagaacatgc caatgccatg ggaacaggtc cgtgatgtta
      661 aggtgctata ccacattact ggtgcaatta catttgtgaa tgagatacca tgggttgttg
      721 aaccaatata tctggctcag tggggtacta tgtggatcat gatgagaagg gaaaagagag
      781 atcgaaggca tttcaaaaga atgcgttttc ctccatttga tgatgaagag cctccactgg
      841 attatgctga caatcttctg gacgtggatc ctttggaacc aattcagcta gaattagacg
      901 aggaggagga ttcggctgtg tatacttggt tttatgacca taagcctctt gtgaagacca
      961 aacttatcaa cggaccaagt tatcggaagt ggcatctttc actccctatc atggccacac
     1021 ttcatcgttt ggctggccag ttactatccg atcttattga tcgaaattac ttctatttgt
     1081 ttgatatgga gtcttttttc acggctaaag ctcttaacat gtgcatacct ggtggtccaa
     1141 aatttgaacc tttgtatcgt gacatggaga aaggtgatga ggattggaat gagttcaatg
     1201 atatcaacaa gctcattatt cggtcacctt tgaggactga gtacaggatt gcttttcctc
     1261 atctgtataa caataggcca aggaaagtac gattatgcgt ctatcataca ccaatggtaa
     1321 tgtatataaa aacggaggat ccagatttac ctgcttttta ttatgatccc ctgatacacc
     1381 caataacttc tgcgaacaaa gatcggcgcg ataagaaaat cgaggatgag gaagatgatg
     1441 acgatttctg tttgccagag ggtgtggaac ctttgcttac tagcaccccg ttatatacag
     1501 acactacagc tgctggtatt tctctgttgt ttgcaccccg ccccttcaac atgaggtctg
     1561 ggcgcatgcg acgtgctgaa gatatccctc tcgtgtctga gtggtttaaa gaacactgtc
     1621 ctccatcata tccagtgaag gttcgggtca gctaccagaa actattgaag tgttttgttt
     1681 tgaatgagct gcaccataga ccacctaaag ctcaaaagaa gaagcacttg ttccgctctc
     1741 ttcaggctac taagtttttc cagaccacag aacttgactg ggctgaagcc ggtctacaag
     1801 tttgcaagca gggatacaac atgctaaatc tgttgattca taggaagaac cttaactatc
     1861 ttcatcttga ctataatttc aacttaaagc ccgttaagac tcttacaacc aaagagcgta
     1921 agaagtcacg gttcggaaac gcgttccatt tatgtcgtga aatcttgcgt ttaacaaagc
     1981 ttgttgttga tgctaatatt cagttccggt tggggaatgt ggatgccttc cagttggctg
     2041 atggtcttca gtatactttc tcacatgttg gccagttgac tggtatgtat cgttacaagt
     2101 accgactcat gaggcagatt cgaatgtgta aagatctgaa acatttgatt tattaccgtt
     2161 ttaacaccgg gcctgttgga aagggacctg gatgtgggtt ctgggctcca atgtggaggg
     2221 tttggttgtt cttcttgcgt ggtatagtgc ctctactgga gaggtggctg ggaaatttac
     2281 ttgctcgtca atttgaggga cggcattcta aaggggtggc taaaactgtt acaaagcaac
     2341 gtgttgaaag tcactttgat ctggaactac gcgcagctgt gatgcatgat gttcttgatg
     2401 ccatgccaga gggaattaag cagaataagg caagaaccat tttgcagcac ttgagtgaag
     2461 catggcgctg ttggaaggca aacattcctt ggaaggttcc cggtctgccg gttccaattg
     2521 agaacatgat tctccggtat gtgaagtcaa aggctgattg gtggacaaat gttgctcact
     2581 ataatcggga acgtataaga aggggtgcca ccgttgataa gactgtatgt aggaaaaatt
     2641 tggggagatt gactcgtctt tggctgaagg cggaacagga gagacaacac aattacttga
     2701 aagatggtcc atatgtgacc ccagaggaag ctgtggctat ttacacaaca actgtacatt
     2761 ggctggaatc aagaaagttt tcacccatac cgtttcctcc actgtcttac aagcatgaca
     2821 caaagcttct tattcttgct cttgagaggc ttaaagaatc atatagtgta gctgtgaggt
     2881 taaatcagct tcagagagaa gaactgggtt taattgaaca agcctatgac aatccacacg
     2941 aggcgttatc aagaataaaa cgtcatcttc ttacccaacg tgctttcaag gaagttggga
     3001 ttgagttcat ggatttatat agctatctga ttccagttta tgagattgag ccacttgaga
     3061 agatcacaga tgcatatctt gatcagtatt tgtggtacga aggtgacaag cgtcatctct
     3121 ttccaaactg gatcaagcct gcagattcag agccaccacc actcttggtt tacaagtggt
     3181 gccagggcat aaacaatttg cagggtgtat gggacactgg tgatggacag tgtgtggtga
     3241 tgcttcagac gaaatttgag aagttttttg aaaagatcga tttaacgatg ctcaacaggc
     3301 ttctacgact ggtccttgac cataacattg ccgattatgt tactgcaaag aacaatgttg
     3361 tgttgtctta taaggatatg agtcacacaa actcttacgg actgatacgt ggtcttcagt
     3421 ttgcttcttt tgtggtacag tactatggac ttgtgttgga tcttttactt cttggtttaa
     3481 cccgtgcaag tgagattgct ggtccgccac aaatgcctaa cgagttcatc actttttggg
     3541 acaccaaagt tgaaacaaga cacccaatac ggctatactc tcgttacatt gataaagtgc
     3601 acatcctttt ccgtttcaca catgaggagg ctagggatct tatccaacgt tatcttactg
     3661 agcaccctga tcctaacaac gaaaatatgg ttggttacaa taataagaag tgctggccta
     3721 gagatgcaag aatgaggctc atgaaacatg atgtgaatct tgggagaagt gtcttctggg
     3781 acatgaagaa tcgtcttcct cggagcatca caaccctgga gtgggagaat ggtttcgttt
     3841 ctgtttatag caaggacaat ccaaacctgc tatttagcat gtgtggtttt gaggttcgta
     3901 ttttgccaaa aataaggatg actcaggagg cattcagcaa tacaagagat ggagtttgga
     3961 atttgcagaa tgaacagacc aaagagcgta cagcagtggc gtttttacgg gttgatgatg
     4021 aacacatgaa agtatttgaa aatcgtgtta gacagattct tatgagttca gggtctacaa
     4081 cgttcactaa aatcgtcaac aagtggaaca cagctctaat aggcctgatg acttactttc
     4141 gtgaagcaac tgtgcataca caggaactat tagatctgct ggtaaaatgt gaaaacaaga
     4201 tccaaacccg tatcaagatt ggtttaaatt cgaagatgcc tagcaggttt cctcccgtga
     4261 ttttttacac acctaaggag ataggcggac ttggaatgtt gtccatgggt cacatattga
     4321 ttccacagag tgatctacga tacagtcagc aaacggatgt tggggtgact cactttagga
     4381 gtggtatgag tcatgaagaa gaccaattga ttccaaatct atatcgttat atacagccat
     4441 gggagagcga gttcattgat tcacaacgtg tatgggcaga atatgctctg aagcgccagg
     4501 aagctcaatc acaaaacagg cgtttaacac tagaggactt ggaggactca tgggaccgtg
     4561 ggataccaag aattaatacc ttgttccaga aggatcgaca cacattagcg tatgacaaag
     4621 gatggagggt gcgaacagat ttcaagcaat accaagttct gaaacaaaat ccattttggt
     4681 ggacccacca gaggcatgat ggtaaacttt ggaacttaaa taattatcga actgacgtta
     4741 tccaagcact tggtggtgtt gagggaattc tggagcatac actgttcaag ggaacatatt
     4801 tcccaacatg ggagggtctg ttttgggaga aagcatcagg ttttgaggaa tcgatgaagt
     4861 acaagaagct gactaatgct cagagatcag ggttgaacca aattccaaac cgtaggttca
     4921 cactttggtg gtcacctacc attaaccgag ctaatgttta cgtcggtttt caagtgcaac
     4981 tggatctgac cggaatattc atgcacggaa agattccaac cctgaagatc tctctcattc
     5041 agatcttccg tgctcacttg tggcaaaagg tccacgagag tgttgtgatg gatctttgtc
     5101 aggtactgga tcaagagttg gatgcattgg agatcgaaac tgtgcagaag gaaacaattc
     5161 atccgagaaa gagttacaaa atgaacagct cctgtgctga tattcttcta tttgctgcac
     5221 atagatggcc catgtcaaaa cccagtcttg tagctgagtc gaaagacgtt ttcgatcaga
     5281 aagcaagtaa taagtattgg attgacgtgc agcttcgctg gggtgattat gattcacatg
     5341 atatcgagcg ttataccagg gctaaattta tggactacac cacagataac atgtccattt
     5401 atccatcacc aacaggggtg atgattggtc tagatcttgc gtacaacttg cattctgctt
     5461 ttggtaattg gttcccgggg tcaaagccac tacttgctca ggctatgaat aagattatga
     5521 agtcaaatcc agctttatac gtcttaaggg aacgtataag gaaaggattg cagctgtatt
     5581 cttcggagcc aactgaaccg tatctgtcat ctcaaaatta cggagaaatc ttcagcaatc
     5641 agatcatatg gtttgttgat gacacaaatg tgtatcgtgt gaccatccac aagacttttg
     5701 aaggaaatct tacaacaaaa cccatcaatg gtgctatttt cattttcaat ccgcgcacag
     5761 gacagctatt tttgaaggtt atccacacaa gtgtgtgggc aggtcaaaaa cgtcttggtc
     5821 aattggctaa gtggaaaaca gcagaagagg tggctgctct tgttcgttcc ttgcctgttg
     5881 aggaacagcc taaacagatc atcgtcactc gtaaaggcat gttggatcct cttgaggtcc
     5941 atttgctcga ttttccaaat atcgttatta agggaagcga gttgcagctt ccattccaag
     6001 catgtttgaa aatcgagaaa tttggtgatc tgattctcaa ggcatcagaa cctcaaatgg
     6061 ttctcttcaa tatatatgat gattggttaa agagtatatc ttcatacaca gccttctcca
     6121 ggctcatttt gattttgcga gctctacatg taaacaatga gaaggcaaaa atgttgctca
     6181 agcctgataa gacaattgtc actgagcccc atcacatctg gccatccctt acggatgatc
     6241 aatgggtcaa ggttgaagtt gctttgagag atctcatatt atctgattat gcaaagaaga
     6301 ataatgtaaa tacttcagca ctaacacaat ccgagatacg tgatatcata cttggagctg
     6361 aaatcactcc accttctcaa caacgacagc aaatagctga gatagagaaa caggcaaaag
     6421 aagctagtca actgacagct gtcactacca ggaccacaaa cgttcatggt gatgaactta
     6481 ttgtaaccac cacaagtcct tatgaacaag ctgcatttgg ttccaagacg gattggcgtg
     6541 tgagagcaat atcagctaca aacctttatc tccgtgtgaa ccacatatat gttaactcag
     6601 aggacataaa gcaaacgggg tacacataca tcatgccgaa gaacattttg aagaaattca
     6661 tatgcattgc tgacttgcga actcaaatcg ctgggtactt gtatggtgta agtccacctg
     6721 ataatcccca agtgaaagaa atccggtgta tcgcaatgcc acctcagtgg ggtacgcatc
     6781 aacaagttca tcttccatct gctctccctg aacacgactt ccttaacgat ctggaacctt
     6841 tgggatggat gcacactcag ccaaatgagc tccctcagct ttcacctcag gatctgacgt
     6901 ctcatgcacg gatattggaa aacaacaagc aatgggatgg ggagaaatct atcatactga
     6961 catgcagttt cactcctggt tcttgctcgt tgactgcata taagctgact cccactggtt
     7021 acgaatgggg tcgtgcaaat aaagatactg gtagtaatcc ccatggttac ttgccaactc
     7081 actatgagaa ggttcaaatg cttctaagtg accgttttct tggtttttac atggttcctg
     7141 ataatggtcc gtggaattac aacttcatgg gagtgaagca tacagttagc atgaggtacg
     7201 gaataaaact ggggacccca cgagagtatt atcatgaaga ccacaggccg acacatttct
     7261 tagagtttag caatttggaa gagggtgatg tggcagaagg agatcgcgag gacacatttt
     7321 catagaccag atcccacagt tatagcacgg tagataatgg gttgtacgtt taagctggaa
     7381 atctttcgtc ggattgttat gcaaagaata tgctttaatg taaatatgca ttttgattct
     7441 ccttatattc tgtaatcatc caaacctggt tcccaactgc taaggcagtg ggttaaacta
     7501 agattttgta ggtctttgaa taccatgttc cttgagcta
//
LOCUS       XM_071830177            1588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ureide permease 1-like
            (LOC139839963), mRNA.
ACCESSION   XM_071830177
VERSION     XM_071830177.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1588
                     /gene="LOC139839963"
                     /note="ureide permease 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139839963"
     CDS             177..1385
                     /gene="LOC139839963"
                     /codon_start=1
                     /product="ureide permease 1-like"
                     /protein_id="XP_071686278.1"
                     /db_xref="GeneID:139839963"
                     /translation="MYVVESKGGAIACMLLALFFLGTWPAILTLLERRGRLPQHTYLD
                     YTITNLLAAVIIAFTFGELGHTNDGKPNFLVQLSQNNWPSVLFAMAGGVVLSLGNLST
                     QYAWAFVGLSVTEVMTSSITVVIGTTLNYFLDDKINRAEVLFPGVACFLIAVCLGSLV
                     HTSNAKDNKVKLDKLGDSNVGEKGPTSNGTNSNSKKDLENGSFKLEKAKAGTANFLIE
                     LESRRSIKVFGRSTLIGLVICLFAGVCFSLFSPAFNLATNDQWHTLDDGVPHLSVYTA
                     FFYFSCSCFVIAVILNIIFLYRPAFNLPRSSIKSYLNDWDGRGWAFLAGFLCGFGNGL
                     QFMGGQAAGYAAADAVQALPLVSTFWGVIFFGEYRKSSKRTYVLLVGMLSMFIVAVGV
                     LMASSGHRKH"
     misc_feature    297..1364
                     /gene="LOC139839963"
                     /note="Ureide permease; Region: Ureide_permease;
                     pfam07168"
                     /db_xref="CDD:462111"
     polyA_site      1588
                     /gene="LOC139839963"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttgttgact ttgatcattt gtcacatcta caacaagaac ttattaattc ttgttcattt
       61 ttgcaaggtc acatcacttt ttattcttca tcttcaaagt atcttcaagc catttgtaca
      121 gggtattctc taatttcagt tgttgattac atttactgaa agatttggtc tgaaagatgt
      181 atgtagtaga aagtaaaggt ggagctatag catgtatgct gcttgcactc ttttttctag
      241 gaacatggcc cgcaatttta acgttgttag aaagacgtgg caggttacct caacacactt
      301 atcttgatta cacaatcact aatcttctgg ctgctgtgat aatcgctttt acgtttgggg
      361 aattaggaca tactaatgat ggtaaaccca actttttagt ccagctatct cagaataatt
      421 ggccaagtgt tttgttcgct atggcgggcg gtgtagtttt aagtcttgga aatttgtcga
      481 cccaatatgc ttgggcgttt gtcggtttat cagtaactga ggtcatgacc tcaagtatta
      541 ccgtcgtcat aggtacaact ttgaactact ttctagatga caagattaac agagccgagg
      601 tacttttccc tggcgttgcg tgtttcttga ttgctgtttg tcttggttca ttggtgcaca
      661 catccaatgc caaagataat aaagtaaaac ttgataaatt aggagattct aacgtgggcg
      721 aaaaaggacc aacaagtaat ggaacaaact cgaattcaaa aaaagatttg gaaaatggat
      781 ctttcaaatt ggaaaaagct aaagcaggga ctgctaattt tcttattgag ctcgaaagcc
      841 gaagatcaat taaggtgttt gggagaagca ctttgattgg tttagtcata tgtttatttg
      901 ccggagtttg tttctctctt ttctctccgg catttaatct tgcaacgaac gatcaatggc
      961 atacattgga cgatggtgtt cctcacttaa gtgtctacac agcttttttc tacttttctt
     1021 gttcgtgttt tgtaattgct gtaattttaa atattatatt tctttaccgc cctgcattca
     1081 acttaccacg atcatcaatc aaatcatact tgaacgactg ggatggtcga ggttgggcgt
     1141 ttttagccgg ttttttgtgc ggttttggaa acgggctgca atttatgggt ggccaagctg
     1201 ctggttatgc tgctgctgat gcagttcagg ctcttccact tgtgagtact ttttggggag
     1261 tgatattttt tggggaatat cgtaaatcgt cgaagagaac atatgtgtta cttgtaggca
     1321 tgttatccat gtttattgtg gctgttggag ttctaatggc atcatctgga caccgaaaac
     1381 attgaagatg ttatctttgc aagctgaatt ggcactgaaa tcaaaattgt atagaaaaca
     1441 aacaaatctg aagttacaaa ggcataaagt atataacact tggtttgatt tcatcattgg
     1501 aacattacca taggaataag tttaagattt gatgtttgta ttcagtacat tatttggtag
     1561 ttaatactat catgattttt tttccttc
//
LOCUS       XM_071830178            1525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839964), transcript variant X1, mRNA.
ACCESSION   XM_071830178
VERSION     XM_071830178.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1525
                     /gene="LOC139839964"
                     /note="uncharacterized LOC139839964; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839964"
     CDS             324..1340
                     /gene="LOC139839964"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686279.1"
                     /db_xref="GeneID:139839964"
                     /translation="MLQLHIMVVMVLKILHRHGGYQVQVVHLEMDKSMCINMLAGIVK
                     DPLFPKHYESWEKVPGENKEKIWLDLGGFFKMGDWLDGGHTQKVVEAGVNSLCADRWR
                     NAKSKQKKYFTDNDGYALPNNLRNRPPPNVQQRLWDPFVDLMLSSKFRARSAQNKKNR
                     AKMEYASTQGSRSIADRVASLDPPSLIENFKNNHTFKKGGWSGDKARVNHEKMLKLKE
                     KYPERSDEVIMLEVLGKRRGYRRGVGKTLPGSASTSSSSSTCQTRRPPPPGSENPLLK
                     EAVYDTFAFNNMAIPPQWQSFFPTPNQTQETEGEDEGDDDEDMEESGASQSESDEENE
                     DEAR"
     misc_feature    729..1058
                     /gene="LOC139839964"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
ORIGIN      
        1 taagaagcat aaatttaata aaaaaatgat tttttaatta ggaaaaaata tataaaagat
       61 tgggcttgtc cacgcaataa cttaaccggg aaaatatttt taatacccgc caaatgaaag
      121 ttgagcgcta aatgaaaaat gttgaattac actacccaca aaccccaaat tcaacaaaac
      181 tcatcaccta cagctactca ccctatccct tttctctccc aagcaccgac ccatctacca
      241 aatccagtca taactccgga agattgccat ttttcaaaga ttcaagcatc aatccacact
      301 cctaacaaca tccaagatgg cagatgttgc agctccacat catggtggtg atggttctga
      361 agatcctcca ccgccacggt gggtaccagg ttcaggttgt gcatcttgag atggacaagt
      421 cgatgtgtat taatatgctc gcgggaatcg ttaaggaccc gttatttcca aagcattacg
      481 agagttggga aaaggttcct ggcgaaaaca aagaaaaaat ttggcttgat ctcggtgggt
      541 tttttaagat gggcgactgg ctagatggtg gacataccca aaaggtggtg gaagccgggg
      601 taaattcttt gtgcgcggac cgatggagaa atgctaaaag taaacaaaaa aaatatttca
      661 cggataatga cgggtacgca cttcccaata accttcgaaa ccgaccccca ccgaatgttc
      721 aacaacgtct atgggaccca tttgtggacc taatgctttc aagtaaattc cgggctcgtt
      781 ctgcgcagaa caagaaaaat agggcgaaga tggaatacgc cagtacgcag ggtagcaggt
      841 caattgccga ccgtgtggcc tctctggatc ctccgagtct tatcgaaaac ttcaagaaca
      901 accacacttt taagaaaggt ggatggagtg gggataaagc tagggtgaac cacgaaaaaa
      961 tgttgaaatt aaaagaaaaa tatccggaaa ggagtgatga agtcattatg ttggaagttt
     1021 taggcaaacg tcgcgggtac cgtcgcggag tgggtaaaac gttacccgga tcggctagta
     1081 catcatcttc atcatcaact tgtcaaacaa gacgaccacc accaccgggt tccgaaaacc
     1141 cattgctaaa ggaagcggta tacgatactt ttgcctttaa caatatggca atcccgcccc
     1201 aatggcaatc ttttttccca acccccaatc aaactcaaga aaccgaaggt gaagacgaag
     1261 gtgatgacga tgaagacatg gaagaaagtg gtgcgtctca aagcgaaagt gatgaagaaa
     1321 atgaagatga agcaaggtaa gtttgtaagt ttgtttgcta ttcggatttg gtttaagttt
     1381 gtaaactttg gataatgttt taaggttgta aactttgtgt cggattgtaa tcttttagta
     1441 ttcggattaa gtttgtaacg gttggataat gtttcggaca tgttttaatt aatgttgagc
     1501 ttgtgtttgt gaaatatatt gtgtt
//
LOCUS       XM_071830179            1538 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839964), transcript variant X2, mRNA.
ACCESSION   XM_071830179
VERSION     XM_071830179.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1538
                     /gene="LOC139839964"
                     /note="uncharacterized LOC139839964; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839964"
     CDS             424..1353
                     /gene="LOC139839964"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686280.1"
                     /db_xref="GeneID:139839964"
                     /translation="MDKSMCINMLAGIVKDPLFPKHYESWEKVPGENKEKIWLDLGGF
                     FKMGDWLDGGHTQKVVEAGVNSLCADRWRNAKSKQKKYFTDNDGYALPNNLRNRPPPN
                     VQQRLWDPFVDLMLSSKFRARSAQNKKNRAKMEYASTQGSRSIADRVASLDPPSLIEN
                     FKNNHTFKKGGWSGDKARVNHEKMLKLKEKYPERSDEVIMLEVLGKRRGYRRGVGKTL
                     PGSASTSSSSSTCQTRRPPPPGSENPLLKEAVYDTFAFNNMAIPPQWQSFFPTPNQTQ
                     ETEGEDEGDDDEDMEESGASQSESDEENEDEAR"
     misc_feature    742..1071
                     /gene="LOC139839964"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
ORIGIN      
        1 taagaagcat aaatttaata aaaaaatgat tttttaatta ggaaaaaata tataaaagat
       61 tgggcttgtc cacgcaataa cttaaccggg aaaatatttt taatacccgc caaatgaaag
      121 ttgagcgcta aatgaaaaat gttgaattac actacccaca aaccccaaat tcaacaaaac
      181 tcatcaccta cagctactca ccctatccct tttctctccc aagcaccgac ccatctacca
      241 aatccagtca taactccgga agattgccat ttttcaaaga ttcaagcatc aatccacact
      301 cctaacaaca tccaagatgg cagatgttgc agctccacat catggtggtg atggttctga
      361 agatcctcca ccgccacggt gggtaccagg ttcaggttgt gcatcttgag tattgaagta
      421 tagatggaca agtcgatgtg tattaatatg ctcgcgggaa tcgttaagga cccgttattt
      481 ccaaagcatt acgagagttg ggaaaaggtt cctggcgaaa acaaagaaaa aatttggctt
      541 gatctcggtg ggttttttaa gatgggcgac tggctagatg gtggacatac ccaaaaggtg
      601 gtggaagccg gggtaaattc tttgtgcgcg gaccgatgga gaaatgctaa aagtaaacaa
      661 aaaaaatatt tcacggataa tgacgggtac gcacttccca ataaccttcg aaaccgaccc
      721 ccaccgaatg ttcaacaacg tctatgggac ccatttgtgg acctaatgct ttcaagtaaa
      781 ttccgggctc gttctgcgca gaacaagaaa aatagggcga agatggaata cgccagtacg
      841 cagggtagca ggtcaattgc cgaccgtgtg gcctctctgg atcctccgag tcttatcgaa
      901 aacttcaaga acaaccacac ttttaagaaa ggtggatgga gtggggataa agctagggtg
      961 aaccacgaaa aaatgttgaa attaaaagaa aaatatccgg aaaggagtga tgaagtcatt
     1021 atgttggaag ttttaggcaa acgtcgcggg taccgtcgcg gagtgggtaa aacgttaccc
     1081 ggatcggcta gtacatcatc ttcatcatca acttgtcaaa caagacgacc accaccaccg
     1141 ggttccgaaa acccattgct aaaggaagcg gtatacgata cttttgcctt taacaatatg
     1201 gcaatcccgc cccaatggca atcttttttc ccaaccccca atcaaactca agaaaccgaa
     1261 ggtgaagacg aaggtgatga cgatgaagac atggaagaaa gtggtgcgtc tcaaagcgaa
     1321 agtgatgaag aaaatgaaga tgaagcaagg taagtttgta agtttgtttg ctattcggat
     1381 ttggtttaag tttgtaaact ttggataatg ttttaaggtt gtaaactttg tgtcggattg
     1441 taatctttta gtattcggat taagtttgta acggttggat aatgtttcgg acatgtttta
     1501 attaatgttg agcttgtgtt tgtgaaatat attgtgtt
//
LOCUS       XM_071830180            1212 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ureide permease 1-like
            (LOC139839965), mRNA.
ACCESSION   XM_071830180
VERSION     XM_071830180.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1212
                     /gene="LOC139839965"
                     /note="ureide permease 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139839965"
     CDS             1..1212
                     /gene="LOC139839965"
                     /codon_start=1
                     /product="ureide permease 1-like"
                     /protein_id="XP_071686281.1"
                     /db_xref="GeneID:139839965"
                     /translation="MYIVESKSGAIACMLFALFFLGTWPAILTQLERRGRLPQHSYLD
                     YTITNLLAAVIIAFTFGQLGPTNDAKPNFLVQLSQSNWPSILFAMAGGVFLSLGNLST
                     QYAWAFVGLSVTEVIACSITVVIGTTLNYFLDDKINRAEVLFPGVACFLIAVCLGSLV
                     HASNAKDNKVKLDKLGDSNMGENGPTSNGTNSNSREDLENGSLILEEKAKAGTANFLI
                     ALENRRSIKVFGRSTFIGLIVCIFAGVCISLFSPAFNLATNDQWHTLNDGVPHLSVYT
                     SFFYFSSSSFVIGVILNITFLYRPAFNLPPSSIKSYLNDWDGRGWAFLAGFLCGLGNG
                     LQLMGGQAAGFAAADAVEALPLVSTFWGVIFFGEYRKSSKRTYVLLVSMLSMFIVAVG
                     VLMASAGERKH"
     misc_feature    121..1191
                     /gene="LOC139839965"
                     /note="Ureide permease; Region: Ureide_permease;
                     pfam07168"
                     /db_xref="CDD:462111"
ORIGIN      
        1 atgtatatag tggaaagtaa aagtggagct atagcatgta tgctatttgc actgtttttt
       61 cttggaacgt ggcccgcaat tttaacgcag ttagaaagac gtggcaggtt acctcaacac
      121 agttatcttg attacacaat cactaatctt ctggctgctg tgataatcgc atttacgttt
      181 gggcaattag gacctactaa tgatgctaaa cccaactttt tagtacagct ttctcagagt
      241 aattggccaa gtatattgtt cgctatggcg ggtggtgtat ttttaagtct tggaaatttg
      301 tcgacacaat atgcttgggc gtttgttggt ttatcggtaa ctgaggtgat tgcctgcagt
      361 attactgtcg tcataggtac aacgttgaat tactttctag atgacaagat aaacagagcc
      421 gaagtacttt tcccaggcgt tgcgtgtttc ttgattgctg tttgtcttgg ttcattggtg
      481 catgcgtcga atgccaaaga taataaagta aaacttgata aattaggaga ttctaacatg
      541 ggcgaaaatg gaccaaccag taatggaacg aactcgaatt caagagagga tttggaaaat
      601 ggatctctca tattggagga gaaagctaaa gcagggactg ctaattttct tattgcgctc
      661 gaaaaccgaa gatcaattaa ggtgtttggg agaagcactt ttattggttt aatcgtatgt
      721 atatttgctg gagtttgtat ctctctattc tctccggcat ttaatcttgc aacgaacgat
      781 caatggcata cattaaacga tggggttcct cacttgagtg tctacacatc gtttttctac
      841 ttttcttcct ccagttttgt gattggtgta attttgaata ttacatttct ttaccgccct
      901 gcgttcaact tgccaccatc atcaatcaaa tcgtatttga acgactggga tggtcgaggt
      961 tgggcgtttc ttgccggttt tttgtgcggt cttggaaacg gtctccagtt aatgggaggc
     1021 caagctgctg gttttgctgc tgccgatgca gttgaggctc ttccacttgt gagtaccttt
     1081 tggggagtga tattttttgg tgaatatcgt aaatcgtcca agagaacgta tgtgttactt
     1141 gtaagcatgt tgtcgatgtt tattgtggct gttggagttc taatggcgtc agctggagaa
     1201 cgaaaacatt ga
//
LOCUS       XM_071830181            1716 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides magnesium transporter MRS2-5
            (LOC139839968), transcript variant X1, mRNA.
ACCESSION   XM_071830181
VERSION     XM_071830181.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1716
                     /gene="LOC139839968"
                     /note="magnesium transporter MRS2-5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139839968"
     CDS             252..1526
                     /gene="LOC139839968"
                     /codon_start=1
                     /product="magnesium transporter MRS2-5"
                     /protein_id="XP_071686282.1"
                     /db_xref="GeneID:139839968"
                     /translation="MEESRNPFLQSNIIESANSFSARFNPGKRGRQNFIGPGFLGLKK
                     RGHALGNRSWIKIEQNGNSKVVELDKATVMRHCSLPARDLRLLDPLFIYPSTILGREK
                     AIVVSLEQIRCIITADEVFLMNSLDGSVVQYKSELCKRIQQEKYHSDDLPFEFRALEL
                     ALEFTCLTLDTQVKELEMEIHPVLDELAKSISTLNLERVRRFKGHLLALTQRVQKVCD
                     EIEQLMNDDGDMAEMYLTEKKQRNSCNDLYDQVQGNNHVGLVVGLGSKSAPVSPVGSL
                     SGANNLQRAFSNVSAHKPGSLLSSSATGETENIDQLEMLLEAYFVGIDNTLNKLLSLK
                     EYIDDTEDLINIKLGNVQNKLIKFELLLTAATFLATVFAVVTAVFGMNFEDDVFDEPN
                     RFNWVVSISATLCAVMYICFLIYFKHKKVFPL"
     misc_feature    411..1514
                     /gene="LOC139839968"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     Region: Mrs2_Mfm1p-like; cd12823"
                     /db_xref="CDD:213357"
     misc_feature    order(444..446,534..536,570..572,576..581,621..632,
                     744..746,753..755,900..905,912..914,1209..1211)
                     /gene="LOC139839968"
                     /note="Cl binding site [ion binding]; other site"
                     /db_xref="CDD:213357"
     misc_feature    order(495..497,504..509,537..539,543..545,645..647,
                     657..659,717..719,726..728,738..740,750..752,759..764,
                     771..773,780..785,789..794,801..803,837..842,846..851,
                     858..863,870..875,879..884,894..896,900..905,912..917,
                     924..929,1191..1196,1200..1205,1212..1217,1221..1226,
                     1233..1238,1242..1247,1251..1259,1266..1289,1293..1331,
                     1335..1343,1347..1364,1368..1379,1389..1400,1431..1436,
                     1443..1448,1494..1496,1503..1505)
                     /gene="LOC139839968"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:213357"
ORIGIN      
        1 ctattcttaa ccgaaacgct ttcagtcatg ctacgtgttt tcatcacatc tctgcaccaa
       61 tttcgattta tttctcactt aattaatttt tcagttcttc tgtctgaatc cagtttcata
      121 gttattaaac gaggtatcat atcactatat gaggaactag ggttttaata ccagcagttt
      181 ggcactgatg ctgacattat attgctgcat ataattggtt aaattttgga aatatcgagc
      241 cgtgtgattg aatggaagaa tcacgcaatc cgtttctgca atctaatata atcgagtctg
      301 ctaatagttt tagtgcgaga tttaatcccg gtaaacgtgg gcgccagaac tttatcgggc
      361 ctggttttct ggggttaaag aaacgaggtc atgctcttgg gaaccgttcg tggattaaaa
      421 ttgagcaaaa tgggaactcg aaagttgtag agttagataa ggctactgta atgagacatt
      481 gttctttgcc tgcgcgagat cttcgtctat tggatcctct ttttatatat ccgtctacta
      541 tattaggtcg tgagaaagct attgtggtta gtcttgaaca gattcgatgt ataatcacgg
      601 ctgatgaggt gtttcttatg aattcattgg atggatctgt tgttcagtat aaatctgaat
      661 tgtgtaaacg aattcagcaa gagaagtatc actcagatga cttgccattc gagtttaggg
      721 cattggaact agcgttggag tttacgtgtc tcactcttga tactcaggtg aaagagttag
      781 aaatggaaat tcatcctgtg cttgatgaac tagcaaaatc aataagcact ctcaatcttg
      841 aacgtgtgcg tagatttaaa ggccaccttc ttgcattgac tcaacgggtc caaaaggtct
      901 gcgatgagat agaacagcta atgaatgatg atggtgatat ggctgagatg tatctaactg
      961 agaagaaaca aaggaactca tgtaatgatc tatatgatca agtacaagga aataatcatg
     1021 ttgggcttgt tgtgggatta ggatcaaaat ctgcacccgt atctcctgtg gggtccttaa
     1081 gcggtgcaaa taatttgcaa agggcgttta gtaatgttag tgcacataaa cctggaagct
     1141 tgttgagttc atctgcaact ggtgaaactg aaaacattga tcaacttgag atgttgttgg
     1201 aagcatactt tgttggaatt gacaatactc taaacaagtt gctttcgctc aaggaatata
     1261 tagatgacac tgaagatctg atcaacatta aactgggaaa tgttcagaat aagctgatta
     1321 agttcgagct gctgttgact gcggctactt ttttggctac cgtatttgct gtggtgacag
     1381 cagtttttgg aatgaacttt gaagatgatg tgttcgacga accaaacaga tttaattggg
     1441 tagtttctat cagtgcaaca ttatgtgcag tcatgtatat ctgtttcctg atttatttca
     1501 aacataagaa agtgttccct ctgtaggttt tatgttaaat aaaaggtgaa tatacgtact
     1561 ttcacatgat tgtaatcagt gaaccaaata gatttgtttg acttttgacc ctgtggtcaa
     1621 cttggtctga ttctgattgg ctatgatgaa gaggccatgt tcacttttgt aatcaataag
     1681 ttaacaagat ttttacttgg taatttatat gatgat
//
LOCUS       XM_071830182            1659 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides magnesium transporter MRS2-5
            (LOC139839968), transcript variant X2, mRNA.
ACCESSION   XM_071830182
VERSION     XM_071830182.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1659
                     /gene="LOC139839968"
                     /note="magnesium transporter MRS2-5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139839968"
     CDS             195..1469
                     /gene="LOC139839968"
                     /codon_start=1
                     /product="magnesium transporter MRS2-5"
                     /protein_id="XP_071686283.1"
                     /db_xref="GeneID:139839968"
                     /translation="MEESRNPFLQSNIIESANSFSARFNPGKRGRQNFIGPGFLGLKK
                     RGHALGNRSWIKIEQNGNSKVVELDKATVMRHCSLPARDLRLLDPLFIYPSTILGREK
                     AIVVSLEQIRCIITADEVFLMNSLDGSVVQYKSELCKRIQQEKYHSDDLPFEFRALEL
                     ALEFTCLTLDTQVKELEMEIHPVLDELAKSISTLNLERVRRFKGHLLALTQRVQKVCD
                     EIEQLMNDDGDMAEMYLTEKKQRNSCNDLYDQVQGNNHVGLVVGLGSKSAPVSPVGSL
                     SGANNLQRAFSNVSAHKPGSLLSSSATGETENIDQLEMLLEAYFVGIDNTLNKLLSLK
                     EYIDDTEDLINIKLGNVQNKLIKFELLLTAATFLATVFAVVTAVFGMNFEDDVFDEPN
                     RFNWVVSISATLCAVMYICFLIYFKHKKVFPL"
     misc_feature    354..1457
                     /gene="LOC139839968"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     Region: Mrs2_Mfm1p-like; cd12823"
                     /db_xref="CDD:213357"
     misc_feature    order(387..389,477..479,513..515,519..524,564..575,
                     687..689,696..698,843..848,855..857,1152..1154)
                     /gene="LOC139839968"
                     /note="Cl binding site [ion binding]; other site"
                     /db_xref="CDD:213357"
     misc_feature    order(438..440,447..452,480..482,486..488,588..590,
                     600..602,660..662,669..671,681..683,693..695,702..707,
                     714..716,723..728,732..737,744..746,780..785,789..794,
                     801..806,813..818,822..827,837..839,843..848,855..860,
                     867..872,1134..1139,1143..1148,1155..1160,1164..1169,
                     1176..1181,1185..1190,1194..1202,1209..1232,1236..1274,
                     1278..1286,1290..1307,1311..1322,1332..1343,1374..1379,
                     1386..1391,1437..1439,1446..1448)
                     /gene="LOC139839968"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:213357"
ORIGIN      
        1 taggttttta ttggtcaatt aagcctcaat ttccagttat tgatttaggg ttttaattaa
       61 atataaatat atgtaggtat catatcacta tatgaggaac tagggtttta ataccagcag
      121 tttggcactg atgctgacat tatattgctg catataattg gttaaatttt ggaaatatcg
      181 agccgtgtga ttgaatggaa gaatcacgca atccgtttct gcaatctaat ataatcgagt
      241 ctgctaatag ttttagtgcg agatttaatc ccggtaaacg tgggcgccag aactttatcg
      301 ggcctggttt tctggggtta aagaaacgag gtcatgctct tgggaaccgt tcgtggatta
      361 aaattgagca aaatgggaac tcgaaagttg tagagttaga taaggctact gtaatgagac
      421 attgttcttt gcctgcgcga gatcttcgtc tattggatcc tctttttata tatccgtcta
      481 ctatattagg tcgtgagaaa gctattgtgg ttagtcttga acagattcga tgtataatca
      541 cggctgatga ggtgtttctt atgaattcat tggatggatc tgttgttcag tataaatctg
      601 aattgtgtaa acgaattcag caagagaagt atcactcaga tgacttgcca ttcgagttta
      661 gggcattgga actagcgttg gagtttacgt gtctcactct tgatactcag gtgaaagagt
      721 tagaaatgga aattcatcct gtgcttgatg aactagcaaa atcaataagc actctcaatc
      781 ttgaacgtgt gcgtagattt aaaggccacc ttcttgcatt gactcaacgg gtccaaaagg
      841 tctgcgatga gatagaacag ctaatgaatg atgatggtga tatggctgag atgtatctaa
      901 ctgagaagaa acaaaggaac tcatgtaatg atctatatga tcaagtacaa ggaaataatc
      961 atgttgggct tgttgtggga ttaggatcaa aatctgcacc cgtatctcct gtggggtcct
     1021 taagcggtgc aaataatttg caaagggcgt ttagtaatgt tagtgcacat aaacctggaa
     1081 gcttgttgag ttcatctgca actggtgaaa ctgaaaacat tgatcaactt gagatgttgt
     1141 tggaagcata ctttgttgga attgacaata ctctaaacaa gttgctttcg ctcaaggaat
     1201 atatagatga cactgaagat ctgatcaaca ttaaactggg aaatgttcag aataagctga
     1261 ttaagttcga gctgctgttg actgcggcta cttttttggc taccgtattt gctgtggtga
     1321 cagcagtttt tggaatgaac tttgaagatg atgtgttcga cgaaccaaac agatttaatt
     1381 gggtagtttc tatcagtgca acattatgtg cagtcatgta tatctgtttc ctgatttatt
     1441 tcaaacataa gaaagtgttc cctctgtagg ttttatgtta aataaaaggt gaatatacgt
     1501 actttcacat gattgtaatc agtgaaccaa atagatttgt ttgacttttg accctgtggt
     1561 caacttggtc tgattctgat tggctatgat gaagaggcca tgttcacttt tgtaatcaat
     1621 aagttaacaa gatttttact tggtaattta tatgatgat
//
LOCUS       XM_071830183            2842 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase 1 (LOC139839969), transcript variant X1, mRNA.
ACCESSION   XM_071830183
VERSION     XM_071830183.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2842
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2842
                     /gene="LOC139839969"
                     /note="serine/threonine-protein kinase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139839969"
     CDS             20..2380
                     /gene="LOC139839969"
                     /codon_start=1
                     /product="serine/threonine-protein kinase 1 isoform X1"
                     /protein_id="XP_071686284.1"
                     /db_xref="GeneID:139839969"
                     /translation="MDYSSANRRTLKKPTNSELYSTFVVHNDEEDDNDAKTQKNPKKL
                     DTGDIYATMLCKDDEDPNDDESLPPLLKRLPKDFGAAVDSDDDGESISGTMIVKTGRR
                     RVQSTYMRDESDEEEEDDDDEYGGGFGTVLVRSEQRDSESSSGTVVRRSSGGSGGMST
                     MSRAVASMQAVGEGFGRARKGSATTSSTLGEEGGHSRQRTSKMSSGSIADSVTREDPS
                     TKYELLHELGKGSYGSVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCSH
                     PNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLEECQIAYICKETLKGLSYL
                     HSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQE
                     SRYDGKVDVWALGVSAIEMAEGLPPRSNVHPMRVLFMISIEPAPMLEDKEKWSLVFHD
                     FIAKCLTKDPRIRPAASELLKHKFIEKCKTGASAMVPKLEKAKQNRAAMALEAEHVSE
                     TIPGYGTLGPKMNEDFGDTVPSKPHQVLNGVPVVVGTVKAGGLEEAGGGDFGSVIIHG
                     GVDIDESGATTPVPTTKKTGPTSILDQSLSTADPGEDSVSPWLTNKIGASSDTFRNVE
                     SPTTTEHTKQAIGSNSAFITSTSKNDGVNRKALDKLWSIYAAGNTVPIPFLRATDISP
                     IALLSENVLGSQHLDDVGNVAVEALQELFTGDGLSKKGRRQNELPLPPSVYQRLTSSP
                     TLMNLAQALSYHKTCYEEMPLQELQATQEQQTIQNLCDTLRTILRL"
     misc_feature    677..1444
                     /gene="LOC139839969"
                     /note="Catalytic domain of Mitogen-activated protein
                     kinase kinase kinase kinase (MAP4K) 3-like
                     Serine/Threonine Kinases; Region: STKc_MAP4K3_like;
                     cd06613"
                     /db_xref="CDD:270788"
     misc_feature    order(698..712,722..724,761..763,767..769,857..859,
                     905..916,923..928,935..937,1046..1048,1052..1063,
                     1067..1069,1097..1102,1109..1111,1151..1162,1166..1168,
                     1247..1249,1274..1276)
                     /gene="LOC139839969"
                     /note="active site"
                     /db_xref="CDD:270788"
     misc_feature    order(698..712,722..724,761..763,767..769,857..859,
                     905..916,923..928,935..937,1058..1063,1067..1069,
                     1100..1102)
                     /gene="LOC139839969"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270788"
     misc_feature    order(707..712,1046..1048,1052..1060,1109..1111,
                     1151..1162,1166..1168,1247..1249,1274..1276)
                     /gene="LOC139839969"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270788"
     misc_feature    order(1097..1132,1139..1168)
                     /gene="LOC139839969"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270788"
ORIGIN      
        1 tcactcacgc cggaatcaaa tggactattc atcggcgaat cgtcggacgt taaaaaaacc
       61 gacgaattca gagctctact caacgtttgt agttcacaac gatgaggaag atgataacga
      121 tgcaaaaacg caaaaaaacc ctaaaaagct agatacagga gatatatacg ctacaatgct
      181 ttgtaaagac gatgaggatc caaacgacga cgaatcacta cctccacttc tgaaacgtct
      241 tccgaaggac ttcggagcag ctgtagattc cgacgacgac ggagaaagca tctccggcac
      301 gatgatcgtt aaaactggtc gtaggcgcgt gcaatccacg tacatgagag atgaatccga
      361 tgaagaagaa gaagacgatg atgatgaata cggaggtgga tttggaacgg ttttggtgag
      421 atcggagcag agagatagtg agtcatcgtc agggacggtt gtgagacgga gtagcggcgg
      481 cagtggcgga atgtcgacga tgagtagagc ggtggcgagt atgcaagcgg taggtgaagg
      541 atttggaagg gcgaggaaag ggagtgctac gacgtcgtct acactgggtg aggaaggagg
      601 tcattcacgg cagaggacaa gtaaaatgtc atctggttcg attgctgata gtgttacaag
      661 agaagatccg tctactaagt acgaattgct tcatgagctt ggaaaaggtt cttacggttc
      721 tgtttacaag gctcgcgatt taaagacttc tgaaatggtt gcaatcaaag tgatatcatt
      781 atctgaaggg gaggaagggt acgaagaaat tcgtggtgaa atcgagatgt tgcagcaatg
      841 cagtcatcct aatgttgttc gttatttagg aagctaccag ggtgaggaat acctttggat
      901 tgtgatggag tattgtggtg gggggagtgt tgctgatctg atgaatgtta ctgatgagcc
      961 tttagaggaa tgccaaattg catatatatg taaggaaaca ttgaagggtt tatcctatct
     1021 gcactcaatt ttcaaggtgc atcgtgatat caagggtggt aatatcttgt tgactgaaca
     1081 aggagaggtc aagttgggtg attttggtgt tgctgcacag ctgacaagga caatgtctaa
     1141 acgtaatacg tttattggta ctccccactg gatggctcca gaagttatcc aggagagccg
     1201 atacgatggg aaggtagatg tgtgggccct tggggtgtct gcgattgaaa tggcggaggg
     1261 tcttccacca agatcgaatg tgcatccaat gagggtgtta tttatgatct ccatcgaacc
     1321 tgctccaatg cttgaagata aagagaaatg gtctcttgta tttcatgact tcattgcaaa
     1381 gtgccttaca aaagacccac gtatacgtcc tgctgcatct gagctgttaa agcataaatt
     1441 tatagaaaaa tgcaaaactg gagcttctgc tatggtaccc aaacttgaaa aggcaaagca
     1501 aaatagggcg gctatggcgt tggaagcaga acatgtttca gagaccatac caggatatgg
     1561 gacacttgga ccaaaaatga acgaagactt tggagatact gttccatcta aacctcatca
     1621 agtgcttaat ggagtacctg ttgtggttgg tacagtaaaa gctggtggtt tggaagaggc
     1681 aggaggaggt gactttggaa gtgtcataat tcatggcgga gttgatatag atgagagtgg
     1741 tgctacaacg ccagttccaa ctacaaagaa aacgggtccc acatcaatac ttgatcaaag
     1801 tttatcaacg gctgatcctg gcgaagattc agtcagtcca tggttgacca ataaaattgg
     1861 tgcatcttca gatacatttc gtaatgttga atcaccgact actactgaac acactaaaca
     1921 agctattgga agtaacagtg ctttcatcac ctccacaagt aagaatgatg gtgttaatcg
     1981 caaagcacta gacaagcttt ggtccatata tgctgctggc aacacagtgc caattccgtt
     2041 tctgagggca actgatatat ctcccattgc attgttatct gaaaatgtgc ttggaagtca
     2101 acatttggat gacgtgggaa atgtagctgt agaagcattg caagaacttt ttacgggcga
     2161 tggactatct aagaagggcc gaagacagaa cgagctacca cttcctccaa gtgtctatca
     2221 gagactcact tctagtccaa cgttgatgaa tctagctcag gctttatcgt atcataaaac
     2281 gtgctacgaa gagatgccgc tgcaggaact tcaagcaact caggaacaac aaactattca
     2341 gaacctttgt gatacccttc ggactatttt aaggttataa caacacaggt atctgtaatt
     2401 tatatttata atttataaca tctattatta ctcaagtagt ttgtattagt gtcttctgaa
     2461 attcttaata taatacgtcg atagatgtca aacctaggag actgaaactg cgtaaacttt
     2521 tccataacag tgttgtaatc tgcagtatta gcttctatag gtttgaatca gtttgtttac
     2581 gatttcgtca tgtatttatt cactaatcaa actattcatc atactgtgtt gctttaagat
     2641 tccggtgaac aattcagatt cttaggcatc gtttggctca cggaatccaa tgggattccg
     2701 gcagaattgg aattgaattt aaaccttagt ttctgattca aagagttatg aagatatgaa
     2761 tgtgacgact aggtttgcaa ataacttaaa catgttatct tctcatttga gtttgagtac
     2821 accaagtgta aatcacaatg ta
//
LOCUS       XM_071830185            2252 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase 1 (LOC139839969), transcript variant X2, mRNA.
ACCESSION   XM_071830185
VERSION     XM_071830185.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2252
                     /gene="LOC139839969"
                     /note="serine/threonine-protein kinase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839969"
     CDS             165..1790
                     /gene="LOC139839969"
                     /codon_start=1
                     /product="serine/threonine-protein kinase 1 isoform X2"
                     /protein_id="XP_071686286.1"
                     /db_xref="GeneID:139839969"
                     /translation="MVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGE
                     EYLWIVMEYCGGGSVADLMNVTDEPLEECQIAYICKETLKGLSYLHSIFKVHRDIKGG
                     NILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALG
                     VSAIEMAEGLPPRSNVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFIAKCLTKDPRIR
                     PAASELLKHKFIEKCKTGASAMVPKLEKAKQNRAAMALEAEHVSETIPGYGTLGPKMN
                     EDFGDTVPSKPHQVLNGVPVVVGTVKAGGLEEAGGGDFGSVIIHGGVDIDESGATTPV
                     PTTKKTGPTSILDQSLSTADPGEDSVSPWLTNKIGASSDTFRNVESPTTTEHTKQAIG
                     SNSAFITSTSKNDGVNRKALDKLWSIYAAGNTVPIPFLRATDISPIALLSENVLGSQH
                     LDDVGNVAVEALQELFTGDGLSKKGRRQNELPLPPSVYQRLTSSPTLMNLAQALSYHK
                     TCYEEMPLQELQATQEQQTIQNLCDTLRTILRL"
     misc_feature    165..854
                     /gene="LOC139839969"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 tacgacgtcg tctacactgg gtgaggaagg aggtcattca cggcagagga caagtaaaat
       61 gtcatctggt tcgattgctg atagtgttac aagagaagat ccgtctacta agaaaaggtt
      121 cttacggttc tgtttacaag gctcgcgatt taaagacttc tgaaatggtt gcaatcaaag
      181 tgatatcatt atctgaaggg gaggaagggt acgaagaaat tcgtggtgaa atcgagatgt
      241 tgcagcaatg cagtcatcct aatgttgttc gttatttagg aagctaccag ggtgaggaat
      301 acctttggat tgtgatggag tattgtggtg gggggagtgt tgctgatctg atgaatgtta
      361 ctgatgagcc tttagaggaa tgccaaattg catatatatg taaggaaaca ttgaagggtt
      421 tatcctatct gcactcaatt ttcaaggtgc atcgtgatat caagggtggt aatatcttgt
      481 tgactgaaca aggagaggtc aagttgggtg attttggtgt tgctgcacag ctgacaagga
      541 caatgtctaa acgtaatacg tttattggta ctccccactg gatggctcca gaagttatcc
      601 aggagagccg atacgatggg aaggtagatg tgtgggccct tggggtgtct gcgattgaaa
      661 tggcggaggg tcttccacca agatcgaatg tgcatccaat gagggtgtta tttatgatct
      721 ccatcgaacc tgctccaatg cttgaagata aagagaaatg gtctcttgta tttcatgact
      781 tcattgcaaa gtgccttaca aaagacccac gtatacgtcc tgctgcatct gagctgttaa
      841 agcataaatt tatagaaaaa tgcaaaactg gagcttctgc tatggtaccc aaacttgaaa
      901 aggcaaagca aaatagggcg gctatggcgt tggaagcaga acatgtttca gagaccatac
      961 caggatatgg gacacttgga ccaaaaatga acgaagactt tggagatact gttccatcta
     1021 aacctcatca agtgcttaat ggagtacctg ttgtggttgg tacagtaaaa gctggtggtt
     1081 tggaagaggc aggaggaggt gactttggaa gtgtcataat tcatggcgga gttgatatag
     1141 atgagagtgg tgctacaacg ccagttccaa ctacaaagaa aacgggtccc acatcaatac
     1201 ttgatcaaag tttatcaacg gctgatcctg gcgaagattc agtcagtcca tggttgacca
     1261 ataaaattgg tgcatcttca gatacatttc gtaatgttga atcaccgact actactgaac
     1321 acactaaaca agctattgga agtaacagtg ctttcatcac ctccacaagt aagaatgatg
     1381 gtgttaatcg caaagcacta gacaagcttt ggtccatata tgctgctggc aacacagtgc
     1441 caattccgtt tctgagggca actgatatat ctcccattgc attgttatct gaaaatgtgc
     1501 ttggaagtca acatttggat gacgtgggaa atgtagctgt agaagcattg caagaacttt
     1561 ttacgggcga tggactatct aagaagggcc gaagacagaa cgagctacca cttcctccaa
     1621 gtgtctatca gagactcact tctagtccaa cgttgatgaa tctagctcag gctttatcgt
     1681 atcataaaac gtgctacgaa gagatgccgc tgcaggaact tcaagcaact caggaacaac
     1741 aaactattca gaacctttgt gatacccttc ggactatttt aaggttataa caacacaggt
     1801 atctgtaatt tatatttata atttataaca tctattatta ctcaagtagt ttgtattagt
     1861 gtcttctgaa attcttaata taatacgtcg atagatgtca aacctaggag actgaaactg
     1921 cgtaaacttt tccataacag tgttgtaatc tgcagtatta gcttctatag gtttgaatca
     1981 gtttgtttac gatttcgtca tgtatttatt cactaatcaa actattcatc atactgtgtt
     2041 gctttaagat tccggtgaac aattcagatt cttaggcatc gtttggctca cggaatccaa
     2101 tgggattccg gcagaattgg aattgaattt aaaccttagt ttctgattca aagagttatg
     2161 aagatatgaa tgtgacgact aggtttgcaa ataacttaaa catgttatct tctcatttga
     2221 gtttgagtac accaagtgta aatcacaatg ta
//
LOCUS       XM_071830186            1326 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-rhamnose/UDP-galactose
            transporter 2-like (LOC139839970), mRNA.
ACCESSION   XM_071830186
VERSION     XM_071830186.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1326
                     /gene="LOC139839970"
                     /note="UDP-rhamnose/UDP-galactose transporter 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 19 Proteins"
                     /db_xref="GeneID:139839970"
     CDS             110..1147
                     /gene="LOC139839970"
                     /codon_start=1
                     /product="UDP-rhamnose/UDP-galactose transporter 2-like"
                     /protein_id="XP_071686287.1"
                     /db_xref="GeneID:139839970"
                     /translation="MENEKKASPVSDMGAWAMNVISSVGLIMANKQLMSPNGYSFTFA
                     TTLTGFHFAVTALVGFVSNSSGYTASKHVPLWELLWFSIVANMSITGMNLSLMLNSVG
                     FYQISKLSMIPVVCVMEWILHSKRYSKEVKVAVVVVVIGVGVCTVTDVKVNAKGFICA
                     CVAVLATSLQQISIGSLQKKYSIGAFELLSKTAPIQALSLLVLGPFIDYYLTGRLISD
                     YMKTIASGAIVFILISCSLAVFCNISQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLF
                     DSELTFKNILGMLVAVAGMVIYSWAVEVEKASNKSLQHPKHSLTEEELNLLKDGLEKG
                     PIRDVERGESK"
     misc_feature    197..1006
                     /gene="LOC139839970"
                     /note="Triose-phosphate Transporter family; Region: TPT;
                     cl26744"
                     /db_xref="CDD:474852"
     polyA_site      1326
                     /gene="LOC139839970"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcataatcca tctttctttc tttctttctt tctttctttc ctctttcaga tttgtttgaa
       61 atcatcaatc aatcaatcaa gtgaagaaaa gaaaagaaaa gaaagaaaaa tggaaaacga
      121 aaagaaagca tcacctgtat ctgatatggg tgcatgggct atgaatgtaa tcagttcagt
      181 tggactcatt atggccaaca aacaacttat gtctcctaat ggctactcat tcacttttgc
      241 tacaacgtta accggatttc attttgctgt aaccgcgctg gtcgggttcg tgtcaaattc
      301 atctggatac actgcatcga aacatgttcc tttgtgggag cttctttggt tttcgattgt
      361 agcaaatatg tcgattactg ggatgaatct tagtcttatg ctgaattctg ttggattcta
      421 ccaaatatcg aaactgagta tgattccggt ggtgtgtgtg atggagtgga ttcttcatag
      481 taagcgttat tcaaaggaag tgaaagttgc tgttgtagtt gtggttattg gtgttggtgt
      541 ttgcacagtt actgatgtca aagtcaatgc caaaggtttt atatgtgcgt gtgttgcagt
      601 cctagcaaca tcgttgcaac aaatctctat aggatcttta cagaagaagt attccattgg
      661 agcttttgaa ttgttgagta aaacggctcc cattcaggcc ctttcacttc ttgtacttgg
      721 tcctttcatt gactactatc taactggaag actcatttca gattacatga aaaccatagc
      781 ttctggtgca attgttttca tactcatttc atgctcgtta gcggttttct gcaacattag
      841 tcagtacctt tgcattggac gattttcagc agtgtcattc caggttttag gccacatgaa
      901 aaccgtatgt gtgttgactt tgggatggct cttgtttgac tcagagttga ctttcaaaaa
      961 cattcttgga atgcttgttg cagttgctgg tatggtaatt tatagttggg cagttgaggt
     1021 tgaaaaggcg agtaacaaaa gcttacaaca tcctaaacac agtttgaccg aagaggagtt
     1081 aaatttattg aaagatggac tcgagaaagg tccgattagg gatgttgagc gtggtgaatc
     1141 taaatagaaa gacatcatca tattttggct gttggttcaa tgtgttttta tgtttgtttt
     1201 gctcttactt acccctttaa tgtgcaattt aagattagat gttaaacttg aggaattgga
     1261 gcctcttata gtttttatgt agctcaaact cataatgcag ttatagaaat tcttatgtca
     1321 attcaa
//
LOCUS       XM_071830187            1414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formamidopyrimidine-DNA
            glycosylase (LOC139839971), mRNA.
ACCESSION   XM_071830187
VERSION     XM_071830187.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1414
                     /gene="LOC139839971"
                     /note="formamidopyrimidine-DNA glycosylase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139839971"
     CDS             56..1213
                     /gene="LOC139839971"
                     /codon_start=1
                     /product="formamidopyrimidine-DNA glycosylase"
                     /protein_id="XP_071686288.1"
                     /db_xref="GeneID:139839971"
                     /translation="MPELPEVEAARRAIHENCIGKKIIRSIIADDTKVIDGVSRSEFE
                     ESITGKTIVGAHRKGKNMWIELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDE
                     WPSKYSKLFIELDDGLELSFTDKRRFAKVRLLTDPASVPPISELGPDALLEPMTEDEL
                     FKSLSKKKTPIKKLILDQSFISGVGNWIADEVLYQARIHPLQISANISKEGCTALHNS
                     LKEVLEQAVEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFIEAGGRTTAYVPELQ
                     KLIGDQATKTPVKPQKRSAKKNKDEADEAESEDEEIVKTEKPKGGKKTPSKAKKPPAK
                     RKSKRSTDDDDDDDNDDDDDNDIDDEEDRVVKAKGDKKPFTKKKAKGSTRK"
     misc_feature    59..883
                     /gene="LOC139839971"
                     /note="DNA-formamidopyrimidine glycosylase; Region: fpg;
                     TIGR00577"
                     /db_xref="CDD:273150"
ORIGIN      
        1 tacagtaaca accaaggcca aaaccctaga aaaagcacgg gaaacgtcag aagaaatgcc
       61 ggagctacca gaagtagaag ctgctagaag agcgattcat gaaaattgta tcggaaagaa
      121 aattatacga tcgattatcg ccgatgacac taaagtcatc gacggcgttt cacgttccga
      181 atttgaagaa tcaatcaccg gaaaaacaat cgtcggagct caccggaaag gaaagaatat
      241 gtggatcgaa cttgactcac ctccgtttcc atcttttcag ttcggaatgg ctggtgctat
      301 atatataaag ggtgttgctg ttacaaaata taaaaggtct gcagtaaacg acaccgatga
      361 gtggccttct aaatattcca agttatttat agaacttgat gatgggttgg agctatcttt
      421 tactgacaag aggagatttg ccaaagtacg cttactaaca gatccggctt ctgtgccacc
      481 catttctgag cttggcccag atgctttatt ggaaccaatg actgaagatg aattgttcaa
      541 atcgcttagc aagaagaaga ctcccattaa gaaacttata ctagatcaga gttttatctc
      601 aggtgttggc aattggattg cagatgaagt gctatatcag gctcgaattc atccacttca
      661 aatatctgcc aacatttcga aagaagggtg tacggcactg cataattctc tcaaagaggt
      721 ccttgagcaa gctgttgaag ttggggctga tagtagccag tttcccagta actggatttt
      781 ccattccaga gaaaagaagc ccgggaaggc ttttgttgat ggaaagaaga tcgactttat
      841 tgaagctggt ggcaggacaa cagcatacgt accagagttg caaaagctaa ttggagatca
      901 agcaaccaaa acacccgtca aaccacaaaa gaggtctgcc aagaagaaca aagatgaagc
      961 tgatgaagca gaaagtgaag atgaagaaat tgtcaagact gaaaaaccaa aaggagggaa
     1021 gaaaactccc agtaaagcta aaaaacctcc tgcaaaacgc aagtccaaaa gaagcactga
     1081 cgatgatgat gatgatgaca atgatgacga tgatgataat gatattgatg atgaagaaga
     1141 tcgagtggtg aaagcaaaag gtgataaaaa acctttcaca aaaaagaagg cgaaaggaag
     1201 tacaagaaag tgaaagtgat ggtgatgatg acttcaaaga gggcaaaata gtcttttgaa
     1261 cagtttctag tttagcaaaa ccgagatgtg ccaactctta acactgtttt gttaaccatt
     1321 gtgttcggcc actggccact aaaggactcg taaccttctt tttgctgtaa cattttgtat
     1381 ttgcaatcac atgaaatggt tgggtagaaa tgga
//
LOCUS       XM_071830188            1139 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            6-phosphogluconolactonase 1 (LOC139839972), mRNA.
ACCESSION   XM_071830188
VERSION     XM_071830188.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1139
                     /gene="LOC139839972"
                     /note="probable 6-phosphogluconolactonase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139839972"
     CDS             97..897
                     /gene="LOC139839972"
                     /codon_start=1
                     /product="probable 6-phosphogluconolactonase 1"
                     /protein_id="XP_071686289.1"
                     /db_xref="GeneID:139839972"
                     /translation="MALLESNKNRGEVRIHENLDELSTDLADYVAELSETSVKERGVF
                     AIALSGGSLISLLRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLS
                     KLPIVPSHVHSVNDSLTAEEAANEYEFVIRQLVRTRVVNVSDISDFPKFDLILLGMGP
                     DGHVASLFPNHSVLDEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGGGKA
                     EAAHLAIDDVGPECPVLPARLIDPVVGKLVWFLDNQAGSKLKGFSQIF"
     misc_feature    97..882
                     /gene="LOC139839972"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; Region: SugarP_isomerase; cl00339"
                     /db_xref="CDD:469729"
     misc_feature    order(250..255,340..342,583..585,676..678,745..747)
                     /gene="LOC139839972"
                     /note="putative active site [active]"
                     /db_xref="CDD:238694"
ORIGIN      
        1 tatatttata tttatattta ttcacactca tcttccttca tttgccacgc atcccttttt
       61 tcttatttac aatagacata attggggttt aaaaagatgg ctcttttgga atcaaacaaa
      121 aacagagggg aggtaaggat tcatgaaaat ttggatgaac ttagcactga tttagctgac
      181 tatgtagccg aattatccga aacatcagtt aaagaacgag gcgttttcgc cattgcttta
      241 tctggtggtt cacttattag cttattgagg aatctatgtg gagctcctta taacaaaact
      301 gtggattggt caaaatggta tatattttgg gctgatgaac gcgtagttgc gaaaaatcat
      361 gttgatagca actataaact tgctaaagat catcttttgt ccaagttgcc tattgttccg
      421 agccatgtac attccgtcaa cgattctcta actgcagaag aagctgctaa tgaatacgag
      481 tttgtgatca gacaactggt cagaacccgc gtggtcaatg tttctgacat cagcgatttc
      541 ccgaagtttg acttgatcct tctagggatg ggcccagatg gacacgtggc atctttgttt
      601 ccaaatcatt cggttcttga tgaaaagaac gaatgggtga cattcatcac cacctcacca
      661 aaaccacctc ccgaaagaat cactttcaca ttgccggtta tcaactctgc agccaatgtt
      721 gcggtggtcg tgacaggtgg cggaaaagcg gaagctgccc atctggcgat agacgatgtg
      781 ggtcccgagt gccctgtttt gccagctagg ctgattgacc cagttgtagg gaaacttgta
      841 tggtttttgg ataaccaggc tggatcaaaa ctgaagggct tttctcaaat tttctaagta
      901 gatagggtac ttgtttgttc cactgtcgtt ttggttagtt ttttgttttg gccttttggg
      961 ttatttttgt tatcaaatat tttgaagggc tagtggcaaa actgtgattt accctgcata
     1021 ttgggttttt ttttataaaa attggaagag gtgtttgaca acttatgtta attttccatc
     1081 taatacggta agctattagg tttatgggtt tgtgatttaa tgatatatac atgtgggtt
//
LOCUS       XM_071830189            1500 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839973), mRNA.
ACCESSION   XM_071830189
VERSION     XM_071830189.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1500
                     /gene="LOC139839973"
                     /note="uncharacterized LOC139839973; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139839973"
     CDS             166..1374
                     /gene="LOC139839973"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686290.1"
                     /db_xref="GeneID:139839973"
                     /translation="MWGFGGRFYWGNNYNESSKGIVVVFAWMSSQDKHLKNYVDLYSS
                     LGWSSLICHSQFLNLFFPDKANMLAFDILNELVKELRKRPCPVVFAPFSGGPKACMYK
                     ALQIIDSKCVSQRDLGEYRLVRDCLSGHIFDSAPIDFTSDLGTRFALHPSVLKLSRPP
                     TIAKWIASGISSSLDGLFLSKFESQRAEYWQTLYSTIGIKAPYLIFCSENDDLAPYQT
                     ICNFAQRLQSLGGDVKMVKWSSSPHVGHYQHHREEYKAAVTDLLTKATFVYSQRTQHT
                     CGSRHTSEPLRHLREAVSSSNQYRSCHKITLDLNDHLVVPGSVEYHEGREVGSIHGAP
                     KENLIPRSTPKVVNAHGILGQILFDVCVPENVEDWDLRSLPSSSSCKFNSARRNSHFN
                     PIKCIRRSRL"
     misc_feature    226..939
                     /gene="LOC139839973"
                     /note="Eukaryotic protein of unknown function (DUF829);
                     Region: DUF829; pfam05705"
                     /db_xref="CDD:461719"
     polyA_site      1500
                     /gene="LOC139839973"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaataatca ccacccataa ctaaaaatcc tctctcccca accccaaaaa agaacccata
       61 tctttgctca tcttcttgat ttctactact atcatatcca tatcatatac ccttcaattt
      121 catctctaaa atttggcttc ttgaaaataa atcaagtctt caagaatgtg gggatttggg
      181 ggcagattct actggggtaa taattataat gaatcaagta aaggaattgt ggtggtattt
      241 gcatggatgt caagtcaaga taaacatttg aagaattatg ttgatcttta ttcatctctt
      301 ggttggagtt cacttatttg ccattcccaa tttcttaatc tgttcttccc agataaggct
      361 aatatgttgg cctttgacat tcttaatgag cttgttaagg aactaagaaa aaggccatgc
      421 cctgtcgtgt tcgcgccttt ctctggtggc ccaaaagctt gcatgtacaa agctttgcag
      481 ataatcgact caaagtgtgt atctcaaaga gatctgggtg agtatcgact cgttagagac
      541 tgtctttctg gacacatatt cgattctgct cctatagatt tcacaagtga tttgggcacc
      601 cgatttgctc ttcacccgag cgttcttaaa ctgtcccgtc ctcccacaat agcaaaatgg
      661 attgcaagcg gtatatcatc gagccttgat ggtttattcc ttagcaaatt tgagtcgcaa
      721 cgtgcagaat attggcagac tttgtactca actataggga tcaaagcacc atatttaata
      781 ttttgctcag aaaatgacga tcttgcccct taccaaacca tatgcaactt tgctcaacgg
      841 ttacaaagtc ttggtggcga tgttaaaatg gtgaaatgga gtagctctcc tcatgtaggt
      901 cattatcagc atcatcgaga agagtacaag gctgctgtga ctgacctcct aacgaaggca
      961 acattcgttt actcgcaaag aacccaacat acatgtgggt cccgccatac gtcagaaccg
     1021 ttacgccacc taagggaagc ggtttccagc tcaaaccaat accggagctg ccacaaaatc
     1081 acgctcgatt taaacgacca cttggttgtt cctggctcag tcgagtacca tgaaggtaga
     1141 gaagtggggt ccattcacgg tgcacctaaa gaaaatttaa ttccaaggtc aaccccaaaa
     1201 gtggtcaacg ctcatggaat tctaggtcaa atcctgtttg atgtctgtgt accagagaac
     1261 gttgaagatt gggatttaag gtcgttgcca tcatcttcct cgtgtaaatt taattcagcc
     1321 cggagaaatt cacattttaa tcctataaaa tgcatccgaa gatcgaggct ttagtttctt
     1381 ttttaagggg aaagaggtgg tctgaataat gaggtttgta acatgaaaag tgcatacata
     1441 aatattcaaa atgctgtttt gtagaactat ctttctataa taaaaaatgg tgttttcaca
//
LOCUS       XM_071830190            1317 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839974), mRNA.
ACCESSION   XM_071830190
VERSION     XM_071830190.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1317
                     /gene="LOC139839974"
                     /note="uncharacterized LOC139839974; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839974"
     CDS             13..1140
                     /gene="LOC139839974"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686291.1"
                     /db_xref="GeneID:139839974"
                     /translation="MVMAFSLPSPPPLNIPAIYSSSTVNINRNKLSLTRTFVTKASPN
                     DEDKTPSFNPFGFVTDNPSSRNAIQLPEAPAEDGNVGQMLSRIEDKGRDYGSYIKSGG
                     FTWFVRETGSSDARLGPRGTVVFLHGAPTQSYSYRVVMSQLADSGFHCFAPDWIGFGF
                     SDKPQPGYGYDYTEKEYHEQLDKLLNKLDIKSPFSLVVQGFLVGSYGLTWALKNPSRI
                     SKLVIMNTPLTASSPIPGLFQQLRIPLLGEFTCQNAIMAERFIEAGSAYSLKVEKADV
                     YRLPYLKSSGPGFALLEAAKRANFKGTSGQIAEGFASGRWDIPILVAWGISDKYLPQS
                     IAEEFQKGNPSAVTLKLIEGAGHMPQEDWPEKVIDALRYFL"
     misc_feature    <295..1098
                     /gene="LOC139839974"
                     /note="haloalkane dehalogenase; Provisional; Region:
                     PRK03592; cl46905"
                     /db_xref="CDD:481245"
     polyA_site      1317
                     /gene="LOC139839974"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aataacattt gtatggttat ggctttctct ctaccttcgc ctcctccgct caatattccg
       61 gccatatatt cttcatccac cgtcaacatt aatcgaaata aactatcact cacacgaaca
      121 ttcgttacta aagcttcacc aaacgacgaa gataaaacgc cgtcgttcaa tccgttcggt
      181 ttcgtcactg ataatccttc aagccgaaac gctattcaac tacctgaagc tccggcagaa
      241 gacggtaacg tcggtcaaat gctttctaga atagaagata aggggaggga ttatggctct
      301 tatattaaat ccggaggatt tacatggttt gttagagaaa caggttcatc tgatgctcgt
      361 cttggcccac gtggaactgt tgtttttctc catggtgctc caacacagtc ttacagttat
      421 cgagttgtaa tgtctcagct ggcagattct ggtttccact gtttcgcacc tgattggata
      481 ggatttggtt tcagcgacaa gccacaacca ggatatggct atgattacac tgagaaagag
      541 taccatgaac aactggataa attgctcaat aaactagaca tcaaatctcc tttctcttta
      601 gtggtccagg ggtttcttgt aggttcctat ggattaactt gggccttgaa aaatccgagc
      661 aggatatcca aacttgtgat aatgaacact cctttaacag cttcatctcc tatcccagga
      721 ctgtttcaac agctcagaat cccactgctt ggtgaattca cctgccagaa tgctataatg
      781 gctgagcgct tcattgaagc aggtagcgcc tattccctga aggtggaaaa ggctgacgtt
      841 tatcgactac catatctgaa aagcagtgga cctggatttg ctttgcttga agctgccaaa
      901 agagccaact ttaaagggac atcaggacag atagctgaag gctttgcatc cggaagatgg
      961 gatataccaa tactagttgc gtggggtata tcagacaagt atcttcctca atcaattgca
     1021 gaggagttcc aaaaaggaaa cccatctgct gtaactctaa agttaatcga aggagctggt
     1081 catatgcctc aagaagactg gcctgagaag gttattgatg ctcttagata ctttctctga
     1141 gcattatact attgtaacca tcgatcacct gatagttact aaaaattgtg aataccttct
     1201 tacttttgat tatgtaatta taatttatta tttataaact ttcttcatct atgcccagac
     1261 acggattagt atatgtatag tcttgcattc atatacgtat tatcttgttg aagttca
//
LOCUS       XM_071830191             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nudix hydrolase 17,
            mitochondrial-like (LOC139839975), transcript variant X1, mRNA.
ACCESSION   XM_071830191
VERSION     XM_071830191.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139839975"
                     /note="nudix hydrolase 17, mitochondrial-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139839975"
     CDS             171..662
                     /gene="LOC139839975"
                     /codon_start=1
                     /product="nudix hydrolase 17, mitochondrial-like isoform
                     X1"
                     /protein_id="XP_071686292.1"
                     /db_xref="GeneID:139839975"
                     /translation="MMCMVSRTGRDLQRYDMGRRLVVGCIPYRYKNVNGEVEVLVISS
                     QKGHAMMFPKGGWELDESVEEAASRECFEEAGVVGIVECELGKWSFKSKSQGIYREGY
                     MFPMLVAEQLEFWPEKNLRQRVWMKVEEAREVCQSWWMKEALDVFIERLTSPNKISSI
                     SFS"
     misc_feature    231..611
                     /gene="LOC139839975"
                     /note="diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase
                     type 2 and similar proteins; Region:
                     NUDIX_DIPP2_like_Nudt4; cd04666"
                     /db_xref="CDD:467551"
ORIGIN      
        1 atatatttca acgtaaaccc aaaacaaaaa caaaaacaaa aaaacaaaaa aaacaaaaaa
       61 aaaaaaaaag ttaatcctca aacaattatt ctaattttat ttcttgttgt tccacacaca
      121 aaacacctgt ttttcttctt acgagatcca aaaagctaaa aatcgaagat atgatgtgta
      181 tggtttccag aactggacgt gatttgcaac gttacgatat gggtcgtaga ctcgtcgtcg
      241 ggtgtattcc ctatagatat aaaaatgtaa atggtgaagt tgaagtcctc gttatcagct
      301 cgcagaaagg ccatgctatg atgtttccta agggaggttg ggagttggat gaatctgttg
      361 aagaagctgc ttcaagggag tgcttcgaag aagctggtgt tgttggcata gtcgagtgtg
      421 aattaggaaa atggagtttc aaaagcaaaa gccaaggaat atatcgcgaa gggtacatgt
      481 ttccgatgct tgtagccgaa caacttgaat tttggcctga gaaaaacctt cgccaaagag
      541 tttggatgaa agtagaagaa gcaagagagg tttgccagag ttggtggatg aaggaagctt
      601 tggatgtttt tattgagaga ctcacttcac caaacaaaat ttctagcatt agtttttcat
      661 aataactagt atttatgaaa ataatctaat taatgacatt agtatgttca gttaataaat
      721 cactttcttg atgtacatat atttcacaaa aatgtcctct aaataatgaa atatatcggc
      781 aatgaaaaga taccaaattg aagacacttt ttagtgaacg aagaggatca aggggcaaca
      841 ccccttgcag agaggtctag g
//
LOCUS       XM_071830192             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nudix hydrolase 17,
            mitochondrial-like (LOC139839975), transcript variant X2, mRNA.
ACCESSION   XM_071830192
VERSION     XM_071830192.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139839975"
                     /note="nudix hydrolase 17, mitochondrial-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139839975"
     CDS             171..566
                     /gene="LOC139839975"
                     /codon_start=1
                     /product="nudix hydrolase 17, mitochondrial-like isoform
                     X2"
                     /protein_id="XP_071686293.1"
                     /db_xref="GeneID:139839975"
                     /translation="MMCMVSRTGRDLQRYDMGRRLVVGCIPYRYKNVNGEVEVLVISS
                     QKGHAMMFPKGGWELDESVEEAASRECFEEAGVVGIVECELGKWSFKSKSQGIYREGY
                     MFPMLVAEQLEFWPEKNLRQRVWDGGFNF"
     misc_feature    231..545
                     /gene="LOC139839975"
                     /note="diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase
                     type 2 and similar proteins; Region:
                     NUDIX_DIPP2_like_Nudt4; cd04666"
                     /db_xref="CDD:467551"
ORIGIN      
        1 atatatttca acgtaaaccc aaaacaaaaa caaaaacaaa aaaacaaaaa aaacaaaaaa
       61 aaaaaaaaag ttaatcctca aacaattatt ctaattttat ttcttgttgt tccacacaca
      121 aaacacctgt ttttcttctt acgagatcca aaaagctaaa aatcgaagat atgatgtgta
      181 tggtttccag aactggacgt gatttgcaac gttacgatat gggtcgtaga ctcgtcgtcg
      241 ggtgtattcc ctatagatat aaaaatgtaa atggtgaagt tgaagtcctc gttatcagct
      301 cgcagaaagg ccatgctatg atgtttccta agggaggttg ggagttggat gaatctgttg
      361 aagaagctgc ttcaagggag tgcttcgaag aagctggtgt tgttggcata gtcgagtgtg
      421 aattaggaaa atggagtttc aaaagcaaaa gccaaggaat atatcgcgaa gggtacatgt
      481 ttccgatgct tgtagccgaa caacttgaat tttggcctga gaaaaacctt cgccaaagag
      541 tttgggatgg cggttttaat ttttgaacaa aggttggggg ctttacttgt gaaaaggaaa
      601 aaaaaagtga aaaaaaggaa gaaaaaaaaa gtgaaaggac gaaaataccc ctgattacaa
      661 ttcatcattt ttgtctaata gttaatatga taatgattat taattgcaat gagtttatcg
      721 gtcagactta gccttcaatc tcaatcttgc atgtaatatg gttatcttaa ataaacttgt
      781 ggattaatgt aaatgtcaaa ttta
//
LOCUS       XM_071830193            1209 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIFY 6B-like
            (LOC139839977), mRNA.
ACCESSION   XM_071830193
VERSION     XM_071830193.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1209
                     /gene="LOC139839977"
                     /note="protein TIFY 6B-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     Proteins"
                     /db_xref="GeneID:139839977"
     CDS             111..1010
                     /gene="LOC139839977"
                     /codon_start=1
                     /product="protein TIFY 6B-like"
                     /protein_id="XP_071686294.1"
                     /db_xref="GeneID:139839977"
                     /translation="MERDFMGLNSKDSVVVVKEEAVEVCKESVFMKSSALNWPLSDGL
                     DASKNRQAGEFQKSIGVSRQGGTHYSMANYPMQPSPYSAQLINDAKQAVPISMSNPFF
                     RTQFGGAPIKQHGLSVPSIGSFLAGTTEPWYNSKTTCAPAQLTIFYGGMVNVYDDISP
                     EKAQAIMFLAGNGASASTPQPRVQAQVPVSQPINVQPCSAISSPMSVSSHPVGQSTVG
                     PTNKDEGVKTVGDLSKIDSPKVINSLEHVMQSAVPQARKASLARFLEKRKERVMASAP
                     YNLAKESIASGSSSMNAVAAGEN"
     misc_feature    528..623
                     /gene="LOC139839977"
                     /note="tify domain; Region: tify; pfam06200"
                     /db_xref="CDD:461847"
     misc_feature    867..941
                     /gene="LOC139839977"
                     /note="Jas motif; Region: Jas_motif; pfam09425"
                     /db_xref="CDD:430603"
ORIGIN      
        1 cacaaaaatc acacctccta atttctctct ctcatacttt tgttgtactc acaagtctcc
       61 agcatttatt tctcgttctt attttgggtt taatttttca aagttgaaag atggaaaggg
      121 atttcatggg tttgaattct aaagattcag ttgtagtggt caaagaagaa gctgtagaag
      181 tatgcaaaga atcagtgttt atgaagagct cggcactcaa ttggcctctg tcagatggtt
      241 tagatgcctc taaaaatcgt caagctggtg aatttcagaa aagcattggt gttagtagac
      301 aaggcggtac tcattattca atggctaatt atccgatgca accgagtccg tattctgcgc
      361 agcttattaa cgatgctaag caagcggttc ctatcagcat gagcaacccg ttcttcagga
      421 ctcaatttgg tggtgcaccc atcaagcaac atggtctttc ggttccatct atcggttcct
      481 ttcttgctgg aaccactgaa ccatggtata attccaagac gacttgtgct cccgctcaac
      541 taaccatatt ttatggagga atggtgaatg tgtacgacga tatctcccct gaaaaggctc
      601 aagcgatcat gttcttggct ggaaatggtg cgtctgcaag cactcctcaa ccgcgggttc
      661 aagctcaggt tcccgtgagc caaccgatta acgtacaacc ctgctccgca atctcgagtc
      721 cgatgtcagt ttcatctcac cctgttggtc aatcgactgt ggggcccact aacaaagatg
      781 aaggtgttaa aactgttgga gacttgagca agatcgatag tcctaaagtt attaactcac
      841 ttgaacatgt gatgcaatca gctgttcctc aagcccgtaa agcgtccttg gctcggtttc
      901 ttgagaagcg caaggaaagg gtgatggctt cggctccata caaccttgct aaggagtcga
      961 ttgcttctgg atctagcagc atgaatgctg tagctgcagg tgaaaattag tgaaatctaa
     1021 ctatatctat atatttataa ttaagaatgt taaaaagttg taagttgtta ggttctaaat
     1081 tgtatcaaga ctcaaatggg ctgttgttta aaaccacatt gatgtagtag tatacatagt
     1141 ggttcagtta tttgtaagat tatataacga taagacgaga cagagagtat tttgaagtgt
     1201 tggatgttt
//
LOCUS       XM_071830194            2318 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cysteine protease ATG4-like
            (LOC139839978), mRNA.
ACCESSION   XM_071830194
VERSION     XM_071830194.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-189               JBITNF010000004.1  100224141-100224329
            190-404             JBITNF010000004.1  100225448-100225662
            405-639             JBITNF010000004.1  100225664-100225898
            640-725             JBITNF010000004.1  100226022-100226107
            726-776             JBITNF010000004.1  100226225-100226275
            777-1156            JBITNF010000004.1  100226430-100226809
            1157-1295           JBITNF010000004.1  100227182-100227320
            1296-1351           JBITNF010000004.1  100227544-100227599
            1352-1422           JBITNF010000004.1  100227710-100227780
            1423-2318           JBITNF010000004.1  100228445-100229340
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2318
                     /gene="LOC139839978"
                     /note="cysteine protease ATG4-like; The sequence of the
                     model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     deleted 1 base in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139839978"
     CDS             204..1613
                     /gene="LOC139839978"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: cysteine protease
                     ATG4-like"
                     /protein_id="XP_071686295.1"
                     /db_xref="GeneID:139839978"
                     /translation="MKNIPDRTDTSSVDSSDTVCGSACAEAGPSNRRSPKSSLWSGFL
                     VSSFLVFDTHSESRCCPKKNQENSLRNHGWTAALKRVMNGSSMRRLHERVLGYKCNIS
                     NSISDIWLLGVCYKICPEEAVNTNGYAAFSDDFSSRILVTYRKGFVSIGDSKYTSDVN
                     WGCMLRSSQMLVAQALLIHRLGRSWRKPAQQPADQDYIEILHMFGDSEDSAFSIHNLL
                     KAGEGYALAPGSWVGPYAMCRTWETLARRRIAENELEGNSFPMAIYVVSGDEDGERGG
                     APVLCIEDALRHCSEFSRGQVEWSPMLLLVPLVLGLDKVNPRYLPLLAATFIFPQSLG
                     ILGGRPGASTYLIGVQDDKVFYLDPHEVQQAVNISRDNLEADTSSYHCNVIRQIPFDS
                     IDPSLAIGFYCRDKDDFDDFCSRAFELAAESDGAPLFTITRARNSPRSSNTNRDQEAD
                     LFEAADDAEGCAQDDWQLL"
     misc_feature    585..1448
                     /gene="LOC139839978"
                     /note="Peptidase family C54; Region: Peptidase_C54;
                     pfam03416"
                     /db_xref="CDD:460915"
ORIGIN      
        1 atatatacgt atacttaggg tttcaaaatc tacgcatcaa attctctgtt cttcagcaat
       61 taatttttct atatctttat tccttagcta gaattcttcg catcgatcga gctaattacg
      121 aactgaattt aattgtttaa tttgtgattg attgattgat gtgatttgaa gttccgttca
      181 tttcaaacgc tcatggttag gtaatgaaga atatacctga caggactgat acaagttcag
      241 ttgattcttc agatacagtt tgtggttccg cttgtgctga ggcaggacca agcaaccgta
      301 gatccccaaa gtcttctttg tggtcaggat tcttggtatc ctctttttta gtttttgata
      361 cacacagtga gtctaggtgt tgtccgaaga aaaaccaaga aaacagtctt agaaaccatg
      421 gttggactgc agctttgaag agagtaatga atggtagttc aatgaggaga cttcacgagc
      481 gtgtgttggg gtacaagtgt aatatatcca actcaataag tgatatatgg cttttaggtg
      541 tttgttataa aatttgtcct gaagaagcag taaataccaa tggatatgct gcattttctg
      601 atgatttttc ttcaagaatc ttggtgacat atcgtaaagg ttttgtttct attggtgatt
      661 caaagtatac cagcgatgtg aattggggtt gcatgcttcg aagcagtcag atgttagttg
      721 cccaggcgtt gcttattcat cgactaggca gatcttggag aaaacctgcg cagcagccgg
      781 ccgatcaaga ttatatagaa atacttcaca tgtttggtga ttctgaggat tcagctttct
      841 ctatccacaa tcttttaaaa gctggtgagg gctacgcact tgctccaggt tcgtgggttg
      901 gcccttacgc tatgtgtcgc acatgggaga ctcttgcacg gcgtagaatt gcggaaaatg
      961 aacttgaagg taattcattt ccaatggcca tctatgttgt atcgggagac gaagatggtg
     1021 aacgtggtgg agctccagtt ctttgtattg aagatgcctt gaggcattgt tctgaatttt
     1081 caagaggcca agttgagtgg tcacctatgc tcttgctggt tcctttggtt ttaggtcttg
     1141 acaaagtaaa tccgaggtat cttccattgc tggctgctac attcatcttt ccccagagcc
     1201 ttggcatatt gggtggcagg cctggtgctt ccacgtatct cattggtgtg caagacgata
     1261 aagtctttta tcttgatccc catgaagttc aacaggcagt taacataagc agagataatt
     1321 tggaggctga tacttcatca taccactgca atgttatacg acaaattccc ttcgactcca
     1381 ttgacccatc tctagcaatt ggattttatt gccgagacaa agatgatttt gatgattttt
     1441 gttcacgggc attcgagctg gcagcagaat cagatggagc tccattattc acaataactc
     1501 gggctcgcaa ttcaccaaga tcaagcaaca ctaacaggga ccaggaggct gatctcttcg
     1561 aggcagctga tgacgctgaa ggctgtgcac aagatgactg gcagctcctt taatttactt
     1621 gtatgataat tgttgattca gtgtttgcag aaactgtgca tagtcggttc ctttattaac
     1681 ctcattgggt agtgttatac agaaattgta ggtactgggt gtttgtatga ttgtgaacct
     1741 caaaggagtt gttaggcgtt gaatgtgtta gaagatacgt ttcgaactag agtgttcata
     1801 ttcttttata aatctcagct ggctgcaaaa ttcttgcatt cttttcatga aatttgtgca
     1861 aatgctatac atgactatca gcagtattct ttcaaaattt gtgcaaaaag tgatgacgat
     1921 ataatgttgg aagtttttgg agaacggcgt tggcacactt gcggaaaaag ttaccaatat
     1981 cggttactaa ttccacatct tcatcatcaa cgggttgaag tagaagacca ccaccagcgg
     2041 gtttggaata accactcatc aacgggttga agtagaagac caccaccagc gggtttggaa
     2101 taaccacacc taaagaccgt gataccaaga gtttttgccg cgaatcgtat ggttatccca
     2161 ccccatttgc aaaaaatttc ccgactccta atttaactca agatgaggaa ggtaaaacga
     2221 agatgaagtg taagtagttt gtgcttgttt gatagacaat ttgattgtgt ttaatgttta
     2281 aactttgatt tggagacaag tgttatgtaa tcgtgtgt
//
LOCUS       XM_071830195            2415 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At2g30780-like (LOC139839979), transcript
            variant X1, mRNA.
ACCESSION   XM_071830195
VERSION     XM_071830195.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2415
                     /gene="LOC139839979"
                     /note="pentatricopeptide repeat-containing protein
                     At2g30780-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139839979"
     CDS             538..2094
                     /gene="LOC139839979"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At2g30780-like isoform X1"
                     /protein_id="XP_071686296.1"
                     /db_xref="GeneID:139839979"
                     /translation="MLITLRCKMIFGFRLKNMKRVFRIPELLYFHNGRLPVPKSFIMN
                     PTTVSTSVRYFSSEEVSKAALLDLYGQFADKWAYAEVRAKEDLVVKVRLFRDELIRNV
                     NDDESSSFEDFLEVEGWNLFKMYSDGAAMIEVLKLLEYDPHLAIRVFNWRRKKEDNTR
                     PMSSEEYAKGIKIAGRLKNVNLAVEIFLDATFKRKRNTSTYNALISAYMYNGLSENCQ
                     SVYRDLKRDTSCCPTSVTFNMLISIYGRRVLINQMEAAFQEMKDYNIAPDLTTYNNLM
                     AGYLTAWMWDDMENIYRMMETGPVRPDLNTRLLMLRGYAHSGNVEKMEEIYNMVGPHI
                     REKQIPLIRSMICAYCKNRYINRVKRIEELMLLIPEYEYRPWLNVLLIKLYADENMVD
                     QMDRSIEEAFHRNTSVNTVTTMRAITSNYFRNNAVDRLARFVTRAGDSGWRICRSLYH
                     GLMMMFASQKRVEEMEQVLVEMGKYNFTCSKRTFYILYKAYSEQEQGYQNKFYRVLGL
                     MYKHGYGVRP"
     misc_feature    1048..1116
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1123..1263
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    1135..1218
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1231..1374
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    1237..1326
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1336..1485
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    1342..1425
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1447..1524
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tccttttttt gcatcatggc catcaaagaa taggcatgct gccttaaatt tcgtgataca
       61 tacagggttc tactgtagca atactattta agagaaaata ctaacaattc ttcttatcag
      121 ttgttactta tcttggtaac acaattaccg gaatttcaag tgccaacgtt gtttctcagg
      181 ctcggctgac cttagtactt agctttaagt atgtgtatga gttttctgga gtgaaaattt
      241 gaaaatgtta gaattaataa gttaaggctt attgtatttg gcagttactg tcatttaaat
      301 cgtcaatctt ttaataggca agtactcata cacacatcga atatctacat ttgttccatt
      361 ttgaggactt gaaccctcaa ccgcccagtt ggaagtttac cttgatactg ctacgccaat
      421 ggccctttgc tgctttttga attatttaaa tttaaattgt cttgataata tggtttccat
      481 cttgcatgaa tatacttgaa attaggtctc atacatttct cattcactat tacacacatg
      541 ttaataactc taagatgtaa aatgatattt ggtttcaggt taaaaaatat gaagagggtg
      601 tttaggatcc cggagctgtt gtatttccat aatggtcgat tgccagtacc caaatccttc
      661 ataatgaatc caacaacagt ttccacgtcc gttcgttatt tttcgagtga agaagtatct
      721 aaagctgctc ttttagattt gtatggacaa tttgctgata aatgggctta cgctgaggta
      781 cgagcaaaag aagatttggt tgtaaaagtc cgtttattta gagatgaatt gataaggaat
      841 gtgaatgatg atgagtcatc ttcttttgaa gattttttgg aagttgaagg gtggaatttg
      901 ttcaagatgt attctgatgg tgctgctatg attgaggttc ttaagttgtt ggaatatgat
      961 cctcatttgg ctatcagggt ttttaactgg agaagaaaaa aagaagataa cacgaggcct
     1021 atgtcatcag aagagtatgc aaaaggcatt aaaattgctg gtagattgaa gaacgtaaat
     1081 ctggctgtcg aaattttcct ggatgctaca tttaaacgga aacgtaacac ctcaacttac
     1141 aacgctctaa tcagtgcgta catgtataat ggccttagtg aaaattgcca atcagtttat
     1201 cgtgatttga aacgagatac cagttgttgt cccacatcag ttacattcaa catgctcata
     1261 tcgatttacg gccgtcgggt tcttataaat caaatggaag cagcatttca agaaatgaaa
     1321 gattacaata tcgcccctga tttgaccacg tacaataatt taatggcggg ttatttaact
     1381 gcatggatgt gggatgatat ggaaaatatt taccgtatga tggagacggg acccgttcgc
     1441 cctgatctca atacacgctt actaatgctt cgtgggtatg ctcattcagg taacgtagag
     1501 aagatggaag agatttataa tatggtggga cctcacattc gtgaaaagca gattccttta
     1561 attagatcta tgatatgtgc atattgtaaa aatcgatata taaatagagt taaaagaatc
     1621 gaggagctaa tgttgctaat ccctgagtat gagtaccgac cttggttaaa tgtgttgctt
     1681 ataaaactct atgctgacga gaatatggtt gaccaaatgg ataggtcaat agaagaagca
     1741 tttcaccgaa acacgagtgt caacactgtg acaaccatgc gtgcgattac ttcaaattat
     1801 tttaggaata atgcagttga caggctggca aggtttgtaa cgcgtgcagg ggattcaggg
     1861 tggagaatat gtcggtcgtt gtaccatggg ctgatgatga tgtttgcatc acaaaaacgg
     1921 gtcgaggaaa tggagcaagt tttagttgaa atgggtaagt ataacttcac gtgctcgaaa
     1981 agaacgtttt atatattgta caaggcgtat tcagaacaag aacaagggta tcaaaataaa
     2041 ttttataggg tgttagggtt gatgtataag catggatatg gagttcgacc gtagcagata
     2101 tttcagtgtt aatgtagaaa atgagaaaag aaactattgg agttttatta ttttttcctc
     2161 atcggcaata tcattttgac accggtatga tttaatgtca atgcgtgtac tttttggtta
     2221 tcaactccta tttgttgtcc ctatgtatac ctaccgcaat gctgagtttt cttgaaataa
     2281 gatgtaatta cagcttaaaa tgttttgctt ttgaattggt tttatatatg cagtttatac
     2341 aagctgtggc aaaactgatt tactaaggac tatcctattg taccagccta aatgggttgc
     2401 aatgatcact agtga
//
LOCUS       XM_071830196            2092 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At2g30780-like (LOC139839979), transcript
            variant X2, mRNA.
ACCESSION   XM_071830196
VERSION     XM_071830196.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2092
                     /gene="LOC139839979"
                     /note="pentatricopeptide repeat-containing protein
                     At2g30780-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139839979"
     CDS             266..1771
                     /gene="LOC139839979"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At2g30780-like isoform X2"
                     /protein_id="XP_071686297.1"
                     /db_xref="GeneID:139839979"
                     /translation="MKRVFRIPELLYFHNGRLPVPKSFIMNPTTVSTSVRYFSSEEVS
                     KAALLDLYGQFADKWAYAEVRAKEDLVVKVRLFRDELIRNVNDDESSSFEDFLEVEGW
                     NLFKMYSDGAAMIEVLKLLEYDPHLAIRVFNWRRKKEDNTRPMSSEEYAKGIKIAGRL
                     KNVNLAVEIFLDATFKRKRNTSTYNALISAYMYNGLSENCQSVYRDLKRDTSCCPTSV
                     TFNMLISIYGRRVLINQMEAAFQEMKDYNIAPDLTTYNNLMAGYLTAWMWDDMENIYR
                     MMETGPVRPDLNTRLLMLRGYAHSGNVEKMEEIYNMVGPHIREKQIPLIRSMICAYCK
                     NRYINRVKRIEELMLLIPEYEYRPWLNVLLIKLYADENMVDQMDRSIEEAFHRNTSVN
                     TVTTMRAITSNYFRNNAVDRLARFVTRAGDSGWRICRSLYHGLMMMFASQKRVEEMEQ
                     VLVEMGKYNFTCSKRTFYILYKAYSEQEQGYQNKFYRVLGLMYKHGYGVRP"
     misc_feature    725..793
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    800..940
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    812..895
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    908..1051
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    914..1003
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1013..1162
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    1019..1102
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1124..1201
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tcccttacat aagattatga ttttaagatt attctctttg tcaaaaaaat actataatag
       61 cgaataataa aatctatatc gttgtcaatt caattgatta ttcacttgtg tctttttgaa
      121 ctttttacct cacagtaacc cttcttattg gcaaccctgc accaccaccg ccactatctt
      181 cttttgcccg ccctcatttt cccatcgcca ccggagctcc aggtctctct catcgttatt
      241 ctatgtctct cgtaggttaa aaaatatgaa gagggtgttt aggatcccgg agctgttgta
      301 tttccataat ggtcgattgc cagtacccaa atccttcata atgaatccaa caacagtttc
      361 cacgtccgtt cgttattttt cgagtgaaga agtatctaaa gctgctcttt tagatttgta
      421 tggacaattt gctgataaat gggcttacgc tgaggtacga gcaaaagaag atttggttgt
      481 aaaagtccgt ttatttagag atgaattgat aaggaatgtg aatgatgatg agtcatcttc
      541 ttttgaagat tttttggaag ttgaagggtg gaatttgttc aagatgtatt ctgatggtgc
      601 tgctatgatt gaggttctta agttgttgga atatgatcct catttggcta tcagggtttt
      661 taactggaga agaaaaaaag aagataacac gaggcctatg tcatcagaag agtatgcaaa
      721 aggcattaaa attgctggta gattgaagaa cgtaaatctg gctgtcgaaa ttttcctgga
      781 tgctacattt aaacggaaac gtaacacctc aacttacaac gctctaatca gtgcgtacat
      841 gtataatggc cttagtgaaa attgccaatc agtttatcgt gatttgaaac gagataccag
      901 ttgttgtccc acatcagtta cattcaacat gctcatatcg atttacggcc gtcgggttct
      961 tataaatcaa atggaagcag catttcaaga aatgaaagat tacaatatcg cccctgattt
     1021 gaccacgtac aataatttaa tggcgggtta tttaactgca tggatgtggg atgatatgga
     1081 aaatatttac cgtatgatgg agacgggacc cgttcgccct gatctcaata cacgcttact
     1141 aatgcttcgt gggtatgctc attcaggtaa cgtagagaag atggaagaga tttataatat
     1201 ggtgggacct cacattcgtg aaaagcagat tcctttaatt agatctatga tatgtgcata
     1261 ttgtaaaaat cgatatataa atagagttaa aagaatcgag gagctaatgt tgctaatccc
     1321 tgagtatgag taccgacctt ggttaaatgt gttgcttata aaactctatg ctgacgagaa
     1381 tatggttgac caaatggata ggtcaataga agaagcattt caccgaaaca cgagtgtcaa
     1441 cactgtgaca accatgcgtg cgattacttc aaattatttt aggaataatg cagttgacag
     1501 gctggcaagg tttgtaacgc gtgcagggga ttcagggtgg agaatatgtc ggtcgttgta
     1561 ccatgggctg atgatgatgt ttgcatcaca aaaacgggtc gaggaaatgg agcaagtttt
     1621 agttgaaatg ggtaagtata acttcacgtg ctcgaaaaga acgttttata tattgtacaa
     1681 ggcgtattca gaacaagaac aagggtatca aaataaattt tatagggtgt tagggttgat
     1741 gtataagcat ggatatggag ttcgaccgta gcagatattt cagtgttaat gtagaaaatg
     1801 agaaaagaaa ctattggagt tttattattt tttcctcatc ggcaatatca ttttgacacc
     1861 ggtatgattt aatgtcaatg cgtgtacttt ttggttatca actcctattt gttgtcccta
     1921 tgtataccta ccgcaatgct gagttttctt gaaataagat gtaattacag cttaaaatgt
     1981 tttgcttttg aattggtttt atatatgcag tttatacaag ctgtggcaaa actgatttac
     2041 taaggactat cctattgtac cagcctaaat gggttgcaat gatcactagt ga
//
LOCUS       XM_071830197            2153 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At2g30780-like (LOC139839979), transcript
            variant X3, mRNA.
ACCESSION   XM_071830197
VERSION     XM_071830197.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2153
                     /gene="LOC139839979"
                     /note="pentatricopeptide repeat-containing protein
                     At2g30780-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139839979"
     CDS             327..1832
                     /gene="LOC139839979"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At2g30780-like isoform X2"
                     /protein_id="XP_071686298.1"
                     /db_xref="GeneID:139839979"
                     /translation="MKRVFRIPELLYFHNGRLPVPKSFIMNPTTVSTSVRYFSSEEVS
                     KAALLDLYGQFADKWAYAEVRAKEDLVVKVRLFRDELIRNVNDDESSSFEDFLEVEGW
                     NLFKMYSDGAAMIEVLKLLEYDPHLAIRVFNWRRKKEDNTRPMSSEEYAKGIKIAGRL
                     KNVNLAVEIFLDATFKRKRNTSTYNALISAYMYNGLSENCQSVYRDLKRDTSCCPTSV
                     TFNMLISIYGRRVLINQMEAAFQEMKDYNIAPDLTTYNNLMAGYLTAWMWDDMENIYR
                     MMETGPVRPDLNTRLLMLRGYAHSGNVEKMEEIYNMVGPHIREKQIPLIRSMICAYCK
                     NRYINRVKRIEELMLLIPEYEYRPWLNVLLIKLYADENMVDQMDRSIEEAFHRNTSVN
                     TVTTMRAITSNYFRNNAVDRLARFVTRAGDSGWRICRSLYHGLMMMFASQKRVEEMEQ
                     VLVEMGKYNFTCSKRTFYILYKAYSEQEQGYQNKFYRVLGLMYKHGYGVRP"
     misc_feature    786..854
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    861..1001
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    873..956
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    969..1112
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    975..1064
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1074..1223
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    1080..1163
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1185..1262
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tcccttacat aagattatga ttttaagatt attctctttg tcaaaaaaat actataatag
       61 cgaataataa aatctatatc gttgtcaatt caattgatta ttcacttgtg tctttttgaa
      121 ctttttacct cacagtaacc cttcttattg gcaaccctgc accaccaccg ccactatctt
      181 cttttgcccg ccctcatttt cccatcgcca ccggagctcc aggtctctct catcgttatt
      241 ctatgtctct cgtagatagg agctgctgct tttaacatct attataaaca aaaccccatt
      301 ttgaagttct ctattggtta aaaaatatga agagggtgtt taggatcccg gagctgttgt
      361 atttccataa tggtcgattg ccagtaccca aatccttcat aatgaatcca acaacagttt
      421 ccacgtccgt tcgttatttt tcgagtgaag aagtatctaa agctgctctt ttagatttgt
      481 atggacaatt tgctgataaa tgggcttacg ctgaggtacg agcaaaagaa gatttggttg
      541 taaaagtccg tttatttaga gatgaattga taaggaatgt gaatgatgat gagtcatctt
      601 cttttgaaga ttttttggaa gttgaagggt ggaatttgtt caagatgtat tctgatggtg
      661 ctgctatgat tgaggttctt aagttgttgg aatatgatcc tcatttggct atcagggttt
      721 ttaactggag aagaaaaaaa gaagataaca cgaggcctat gtcatcagaa gagtatgcaa
      781 aaggcattaa aattgctggt agattgaaga acgtaaatct ggctgtcgaa attttcctgg
      841 atgctacatt taaacggaaa cgtaacacct caacttacaa cgctctaatc agtgcgtaca
      901 tgtataatgg ccttagtgaa aattgccaat cagtttatcg tgatttgaaa cgagatacca
      961 gttgttgtcc cacatcagtt acattcaaca tgctcatatc gatttacggc cgtcgggttc
     1021 ttataaatca aatggaagca gcatttcaag aaatgaaaga ttacaatatc gcccctgatt
     1081 tgaccacgta caataattta atggcgggtt atttaactgc atggatgtgg gatgatatgg
     1141 aaaatattta ccgtatgatg gagacgggac ccgttcgccc tgatctcaat acacgcttac
     1201 taatgcttcg tgggtatgct cattcaggta acgtagagaa gatggaagag atttataata
     1261 tggtgggacc tcacattcgt gaaaagcaga ttcctttaat tagatctatg atatgtgcat
     1321 attgtaaaaa tcgatatata aatagagtta aaagaatcga ggagctaatg ttgctaatcc
     1381 ctgagtatga gtaccgacct tggttaaatg tgttgcttat aaaactctat gctgacgaga
     1441 atatggttga ccaaatggat aggtcaatag aagaagcatt tcaccgaaac acgagtgtca
     1501 acactgtgac aaccatgcgt gcgattactt caaattattt taggaataat gcagttgaca
     1561 ggctggcaag gtttgtaacg cgtgcagggg attcagggtg gagaatatgt cggtcgttgt
     1621 accatgggct gatgatgatg tttgcatcac aaaaacgggt cgaggaaatg gagcaagttt
     1681 tagttgaaat gggtaagtat aacttcacgt gctcgaaaag aacgttttat atattgtaca
     1741 aggcgtattc agaacaagaa caagggtatc aaaataaatt ttatagggtg ttagggttga
     1801 tgtataagca tggatatgga gttcgaccgt agcagatatt tcagtgttaa tgtagaaaat
     1861 gagaaaagaa actattggag ttttattatt ttttcctcat cggcaatatc attttgacac
     1921 cggtatgatt taatgtcaat gcgtgtactt tttggttatc aactcctatt tgttgtccct
     1981 atgtatacct accgcaatgc tgagttttct tgaaataaga tgtaattaca gcttaaaatg
     2041 ttttgctttt gaattggttt tatatatgca gtttatacaa gctgtggcaa aactgattta
     2101 ctaaggacta tcctattgta ccagcctaaa tgggttgcaa tgatcactag tga
//
LOCUS       XM_071830198            2059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At2g30780-like (LOC139839979), transcript
            variant X4, mRNA.
ACCESSION   XM_071830198
VERSION     XM_071830198.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2059
                     /gene="LOC139839979"
                     /note="pentatricopeptide repeat-containing protein
                     At2g30780-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139839979"
     CDS             233..1738
                     /gene="LOC139839979"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At2g30780-like isoform X2"
                     /protein_id="XP_071686299.1"
                     /db_xref="GeneID:139839979"
                     /translation="MKRVFRIPELLYFHNGRLPVPKSFIMNPTTVSTSVRYFSSEEVS
                     KAALLDLYGQFADKWAYAEVRAKEDLVVKVRLFRDELIRNVNDDESSSFEDFLEVEGW
                     NLFKMYSDGAAMIEVLKLLEYDPHLAIRVFNWRRKKEDNTRPMSSEEYAKGIKIAGRL
                     KNVNLAVEIFLDATFKRKRNTSTYNALISAYMYNGLSENCQSVYRDLKRDTSCCPTSV
                     TFNMLISIYGRRVLINQMEAAFQEMKDYNIAPDLTTYNNLMAGYLTAWMWDDMENIYR
                     MMETGPVRPDLNTRLLMLRGYAHSGNVEKMEEIYNMVGPHIREKQIPLIRSMICAYCK
                     NRYINRVKRIEELMLLIPEYEYRPWLNVLLIKLYADENMVDQMDRSIEEAFHRNTSVN
                     TVTTMRAITSNYFRNNAVDRLARFVTRAGDSGWRICRSLYHGLMMMFASQKRVEEMEQ
                     VLVEMGKYNFTCSKRTFYILYKAYSEQEQGYQNKFYRVLGLMYKHGYGVRP"
     misc_feature    692..760
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    767..907
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    779..862
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    875..1018
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    881..970
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    980..1129
                     /gene="LOC139839979"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    986..1069
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1091..1168
                     /gene="LOC139839979"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tcccttacat aagattatga ttttaagatt attctctttg tcaaaaaaat actataatag
       61 cgaataataa aatctatatc gttgtcaatt caattgatta ttcacttgtg tctttttgaa
      121 ctttttacct cacagtaacc cttcttattg gcaaccctgc accaccaccg ccactatctt
      181 cttttgcccg ccctcatttt cccatcgcca ccggagctcc aggttaaaaa atatgaagag
      241 ggtgtttagg atcccggagc tgttgtattt ccataatggt cgattgccag tacccaaatc
      301 cttcataatg aatccaacaa cagtttccac gtccgttcgt tatttttcga gtgaagaagt
      361 atctaaagct gctcttttag atttgtatgg acaatttgct gataaatggg cttacgctga
      421 ggtacgagca aaagaagatt tggttgtaaa agtccgttta tttagagatg aattgataag
      481 gaatgtgaat gatgatgagt catcttcttt tgaagatttt ttggaagttg aagggtggaa
      541 tttgttcaag atgtattctg atggtgctgc tatgattgag gttcttaagt tgttggaata
      601 tgatcctcat ttggctatca gggtttttaa ctggagaaga aaaaaagaag ataacacgag
      661 gcctatgtca tcagaagagt atgcaaaagg cattaaaatt gctggtagat tgaagaacgt
      721 aaatctggct gtcgaaattt tcctggatgc tacatttaaa cggaaacgta acacctcaac
      781 ttacaacgct ctaatcagtg cgtacatgta taatggcctt agtgaaaatt gccaatcagt
      841 ttatcgtgat ttgaaacgag ataccagttg ttgtcccaca tcagttacat tcaacatgct
      901 catatcgatt tacggccgtc gggttcttat aaatcaaatg gaagcagcat ttcaagaaat
      961 gaaagattac aatatcgccc ctgatttgac cacgtacaat aatttaatgg cgggttattt
     1021 aactgcatgg atgtgggatg atatggaaaa tatttaccgt atgatggaga cgggacccgt
     1081 tcgccctgat ctcaatacac gcttactaat gcttcgtggg tatgctcatt caggtaacgt
     1141 agagaagatg gaagagattt ataatatggt gggacctcac attcgtgaaa agcagattcc
     1201 tttaattaga tctatgatat gtgcatattg taaaaatcga tatataaata gagttaaaag
     1261 aatcgaggag ctaatgttgc taatccctga gtatgagtac cgaccttggt taaatgtgtt
     1321 gcttataaaa ctctatgctg acgagaatat ggttgaccaa atggataggt caatagaaga
     1381 agcatttcac cgaaacacga gtgtcaacac tgtgacaacc atgcgtgcga ttacttcaaa
     1441 ttattttagg aataatgcag ttgacaggct ggcaaggttt gtaacgcgtg caggggattc
     1501 agggtggaga atatgtcggt cgttgtacca tgggctgatg atgatgtttg catcacaaaa
     1561 acgggtcgag gaaatggagc aagttttagt tgaaatgggt aagtataact tcacgtgctc
     1621 gaaaagaacg ttttatatat tgtacaaggc gtattcagaa caagaacaag ggtatcaaaa
     1681 taaattttat agggtgttag ggttgatgta taagcatgga tatggagttc gaccgtagca
     1741 gatatttcag tgttaatgta gaaaatgaga aaagaaacta ttggagtttt attatttttt
     1801 cctcatcggc aatatcattt tgacaccggt atgatttaat gtcaatgcgt gtactttttg
     1861 gttatcaact cctatttgtt gtccctatgt atacctaccg caatgctgag ttttcttgaa
     1921 ataagatgta attacagctt aaaatgtttt gcttttgaat tggttttata tatgcagttt
     1981 atacaagctg tggcaaaact gatttactaa ggactatcct attgtaccag cctaaatggg
     2041 ttgcaatgat cactagtga
//
LOCUS       XM_071830199            1129 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides prolyl 4-hydroxylase 1
            (LOC139839980), mRNA.
ACCESSION   XM_071830199
VERSION     XM_071830199.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1129
                     /gene="LOC139839980"
                     /note="prolyl 4-hydroxylase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139839980"
     CDS             80..943
                     /gene="LOC139839980"
                     /codon_start=1
                     /product="prolyl 4-hydroxylase 1"
                     /protein_id="XP_071686300.1"
                     /db_xref="GeneID:139839980"
                     /translation="MASNAMRIVIALLTLVTIGMLFGALLQLAFIRNMEDSYGTALPS
                     LRTFGSQNSGDNHLPSVVSSWENDKEAAILRIGYVKPEIVSWSPRIILFHNFLSSAEC
                     DYLRAIAKPRLHVSTVVDAKTGKGVKSNVRTSSGMFLNHEERKHPMIHAIEKRIATYS
                     QIPAENGELIQVLRYEPNQFYRPHHDYFSDTFNLKRGGQRVATMLMYLTDNVEGGETF
                     FPKAVSGECSCGGKMVKGLCVKPNKGDAVLFWSMGLDGESDPDSIHGGCEVLSGEKWS
                     ATKWMRQKATS"
     misc_feature    329..934
                     /gene="LOC139839980"
                     /note="prolyl 4-hydroxylase; Provisional; Region:
                     PLN00052"
                     /db_xref="CDD:177683"
ORIGIN      
        1 cactgtgagg aaaagagaga gaaccggagt tgaataccaa acatccgatc cggaaactga
       61 ttcggatacg gcaatcgaca tggcttctaa tgcgatgaga atcgttatcg ctttacttac
      121 actcgtcact atcggaatgc tttttggagc tctgcttcag ttggcattta ttcggaatat
      181 ggaagattca tatgggactg cgttaccttc attaagaaca tttgggagtc aaaatagtgg
      241 tgataatcat ttaccttcag tggtatccag ttgggaaaat gacaaagaag ccgcaatttt
      301 acgtattgga tatgtaaaac ctgaaatagt tagctggtcc ccaagaatca ttttgttcca
      361 caatttttta agctctgcgg aatgtgatta tcttagagca atagccaagc cccgtcttca
      421 cgtgtctact gttgtagatg caaaaactgg gaagggagtc aaaagtaatg ttcgaacaag
      481 ttcaggcatg tttttaaatc atgaagagag gaagcatcca atgatacatg ccattgagaa
      541 acgtattgct acatattctc aaattccagc tgaaaatggt gaactcattc aggtgttaag
      601 gtacgaacca aatcagtttt accgaccaca tcatgactat ttctctgata cgttcaactt
      661 gaagcgtggt ggtcaaagag tagcgacgat gttgatgtat ttgactgata atgttgaagg
      721 gggtgaaact ttttttccta aggctgtttc cggtgaatgc agttgtggtg gaaaaatggt
      781 gaagggactt tgtgttaaac cgaataaagg agatgctgta cttttttgga gcatgggact
      841 tgatggagaa tcggaccccg acagtattca tggaggttgt gaggttctct cgggtgagaa
      901 gtggtctgct acaaaatgga tgagacagaa agctacttcc tgaaagttat ttctggaggt
      961 ggtcacaagt atagagtcaa atgttatgaa atcaatacaa acaagtaagg aaggaagcct
     1021 agcatcatat ttagtgtcaa attttgaaaa tttgtatgtg aattattttc aacaaatgca
     1081 atactgaggt gaaatggttt caaggttttt gtactgttat cttttataa
//
LOCUS       XM_071830200            1286 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein BTR1-like
            (LOC139839981), transcript variant X1, mRNA.
ACCESSION   XM_071830200
VERSION     XM_071830200.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1286
                     /gene="LOC139839981"
                     /note="protein BTR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839981"
     CDS             119..1126
                     /gene="LOC139839981"
                     /codon_start=1
                     /product="protein BTR1-like"
                     /protein_id="XP_071686301.1"
                     /db_xref="GeneID:139839981"
                     /translation="MVSPDSGYASSNDGAAPEKSSPHNSEQLPPSDGMEITYLRFLAS
                     NAEAGSIIGKGGTTISDFQSRTNARIQLSRNYEYFPGTTDRVIMVSGTIDEVLEAVEL
                     ILSKLLNEFYAEEGDEAEPRSKVRLIVPNSSCGGLIGKGGSMIRSFIEESQANIKISP
                     QDNNHIGLSDRLVTVIGTLQQLMHAINLILLKLSEAVYYVQSIGPTFPYAVPYNAPNY
                     GPPAIGGKFQNSRYPNNKEDVSNLMTMGVADEHIGLVVGRGGRNIMDISQISGARIKI
                     SERGDFISGTCDRKVTITGSQRAIRVAEAMIMQKVSSASAPPPETTADHLPVENLSLN
                     N"
     misc_feature    227..442
                     /gene="LOC139839981"
                     /note="K homology (KH) RNA-binding domain, type I; Region:
                     KH-I; cl00098"
                     /db_xref="CDD:469614"
     misc_feature    491..697
                     /gene="LOC139839981"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in Arabidopsis thaliana protein BTR1 and similar
                     proteins; Region: KH-I_BTR1_rpt2; cd22437"
                     /db_xref="CDD:411865"
     misc_feature    order(518..526,530..544,551..556,584..592,596..604,
                     629..631)
                     /gene="LOC139839981"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:411865"
     misc_feature    848..1051
                     /gene="LOC139839981"
                     /note="K homology (KH) RNA-binding domain, type I; Region:
                     KH-I; cl00098"
                     /db_xref="CDD:469614"
ORIGIN      
        1 gctagaggcg gttctcacgg ttttataact tgtgttcacc aaactccatc ggcgcctgac
       61 ctcaggccag tttgttgatc tattacatcc agaactgtaa aacacgcaat caaacgctat
      121 ggtatcacct gattctggtt acgcgtcgtc gaatgatgga gctgctccgg agaaatcttc
      181 acctcacaac tcagagcaac ttcctccttc agatggtatg gagattacat atctgaggtt
      241 tctcgcatca aatgccgagg ctggttcaat cataggaaag ggtggaacaa caatttctga
      301 tttccaatca cgaactaatg ctcgaatcca gttgtcacgc aattatgagt attttcccgg
      361 aacaactgac agggttatta tggtgtcggg aacaatcgat gaagttcttg aggctgttga
      421 acttatccta tctaagttgc tcaatgagtt ttatgctgaa gaaggtgatg aagctgagcc
      481 cagatcaaaa gttagattaa tcgtacccaa tagctcttgt ggcggactca tcgggaaagg
      541 gggatccatg ataaggtcct tcattgaaga atctcaggct aacattaaga tctctcctca
      601 ggataacaac catattggat tgagtgatag gttggtaacg gttattggta ccttacaaca
      661 gctgatgcat gccattaatt tgatcctatt gaaactgtct gaagctgtct actatgtcca
      721 atccattggc cccacatttc cttatgctgt accatacaat gcccccaatt atggaccacc
      781 tgcgattggt ggaaagtttc agaacagccg ctatccgaat aataaggaag atgtgagtaa
      841 cttgatgact atgggcgttg cagatgagca catagggctt gttgtgggac ggggtggcag
      901 gaatatcatg gatattagcc agattagcgg agctaggatc aagatttctg aaagaggtga
      961 tttcatatct gggacatgtg ataggaaagt aacaatcaca gggtcacaaa gggcaatccg
     1021 tgtggcagag gcaatgataa tgcaaaaagt atcgtcggct tcggccccac ctccagaaac
     1081 aactgcagac catcttcctg ttgaaaattt gtcactcaac aactaaaact gcaataaatt
     1141 gtttttatgg ttcttcgtgg gtttcactat ctccatacga tatgcggtcg agtgtggaag
     1201 gaacaaacca gtgagcctta tttaaagaaa cacataggtt tttgcaagaa gttgttgtaa
     1261 tgagggactg cgagagaaga cttaaa
//
LOCUS       XM_071830201            1320 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein BTR1-like
            (LOC139839981), transcript variant X2, mRNA.
ACCESSION   XM_071830201
VERSION     XM_071830201.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1320
                     /gene="LOC139839981"
                     /note="protein BTR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139839981"
     CDS             153..1160
                     /gene="LOC139839981"
                     /codon_start=1
                     /product="protein BTR1-like"
                     /protein_id="XP_071686302.1"
                     /db_xref="GeneID:139839981"
                     /translation="MVSPDSGYASSNDGAAPEKSSPHNSEQLPPSDGMEITYLRFLAS
                     NAEAGSIIGKGGTTISDFQSRTNARIQLSRNYEYFPGTTDRVIMVSGTIDEVLEAVEL
                     ILSKLLNEFYAEEGDEAEPRSKVRLIVPNSSCGGLIGKGGSMIRSFIEESQANIKISP
                     QDNNHIGLSDRLVTVIGTLQQLMHAINLILLKLSEAVYYVQSIGPTFPYAVPYNAPNY
                     GPPAIGGKFQNSRYPNNKEDVSNLMTMGVADEHIGLVVGRGGRNIMDISQISGARIKI
                     SERGDFISGTCDRKVTITGSQRAIRVAEAMIMQKVSSASAPPPETTADHLPVENLSLN
                     N"
     misc_feature    261..476
                     /gene="LOC139839981"
                     /note="K homology (KH) RNA-binding domain, type I; Region:
                     KH-I; cl00098"
                     /db_xref="CDD:469614"
     misc_feature    525..731
                     /gene="LOC139839981"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in Arabidopsis thaliana protein BTR1 and similar
                     proteins; Region: KH-I_BTR1_rpt2; cd22437"
                     /db_xref="CDD:411865"
     misc_feature    order(552..560,564..578,585..590,618..626,630..638,
                     663..665)
                     /gene="LOC139839981"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:411865"
     misc_feature    882..1085
                     /gene="LOC139839981"
                     /note="K homology (KH) RNA-binding domain, type I; Region:
                     KH-I; cl00098"
                     /db_xref="CDD:469614"
ORIGIN      
        1 tggatgtata tatatgatat ttgtagttgg agatatatgt atctttacca gcgtgtgcta
       61 gaggcggttc tcacggtttt ataacttgtg ttcaccaaac tccatcggcg cctgacctca
      121 ggccagaact gtaaaacacg caatcaaacg ctatggtatc acctgattct ggttacgcgt
      181 cgtcgaatga tggagctgct ccggagaaat cttcacctca caactcagag caacttcctc
      241 cttcagatgg tatggagatt acatatctga ggtttctcgc atcaaatgcc gaggctggtt
      301 caatcatagg aaagggtgga acaacaattt ctgatttcca atcacgaact aatgctcgaa
      361 tccagttgtc acgcaattat gagtattttc ccggaacaac tgacagggtt attatggtgt
      421 cgggaacaat cgatgaagtt cttgaggctg ttgaacttat cctatctaag ttgctcaatg
      481 agttttatgc tgaagaaggt gatgaagctg agcccagatc aaaagttaga ttaatcgtac
      541 ccaatagctc ttgtggcgga ctcatcggga aagggggatc catgataagg tccttcattg
      601 aagaatctca ggctaacatt aagatctctc ctcaggataa caaccatatt ggattgagtg
      661 ataggttggt aacggttatt ggtaccttac aacagctgat gcatgccatt aatttgatcc
      721 tattgaaact gtctgaagct gtctactatg tccaatccat tggccccaca tttccttatg
      781 ctgtaccata caatgccccc aattatggac cacctgcgat tggtggaaag tttcagaaca
      841 gccgctatcc gaataataag gaagatgtga gtaacttgat gactatgggc gttgcagatg
      901 agcacatagg gcttgttgtg ggacggggtg gcaggaatat catggatatt agccagatta
      961 gcggagctag gatcaagatt tctgaaagag gtgatttcat atctgggaca tgtgatagga
     1021 aagtaacaat cacagggtca caaagggcaa tccgtgtggc agaggcaatg ataatgcaaa
     1081 aagtatcgtc ggcttcggcc ccacctccag aaacaactgc agaccatctt cctgttgaaa
     1141 atttgtcact caacaactaa aactgcaata aattgttttt atggttcttc gtgggtttca
     1201 ctatctccat acgatatgcg gtcgagtgtg gaaggaacaa accagtgagc cttatttaaa
     1261 gaaacacata ggtttttgca agaagttgtt gtaatgaggg actgcgagag aagacttaaa
//
LOCUS       XM_071830202            1814 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839982), transcript variant X1, mRNA.
ACCESSION   XM_071830202
VERSION     XM_071830202.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1814
                     /gene="LOC139839982"
                     /note="uncharacterized LOC139839982; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839982"
     CDS             1249..1554
                     /gene="LOC139839982"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686303.1"
                     /db_xref="GeneID:139839982"
                     /translation="MSKRGYYIPLKKMKEIVDEIQQTKRISLLLREDCSDGIRKWKRI
                     KSIRSDEMVKKSKSIAEPDKLFEIEMELDETEITLTSMGVMTVSRTCCKLDDNFIVL"
ORIGIN      
        1 tatgtgtaac ttactcataa catatgctga atttaaggat atgttacata tcaatgctcg
       61 acttacttaa atgtcaatgt cagttgctaa tccgttttta tcttaacttg cagttgtccc
      121 gcttctaact ttgtcattca aatcattgaa aagatttttg catgagtaga aattctctcc
      181 tcttatttaa atatttttaa aattcatgaa actaggctat aaagatagag gtcagttatc
      241 acatacagtc atcattaaca attaactgaa atcaaagaga tataaagcac gaggaagata
      301 aaaataggtc agatatatag gtcacatata tttagttata tatagtgttc ttgcttcatt
      361 gtcaaatgtt attgcacatg ctatggacta atatttacca taaaattaag tcagggtaac
      421 accattgtat ttacagtagt tagtaagctt actgttaagt aaagtcaggg taaacaccat
      481 tgtatttaca atagttagta agcttaccat tttaaaaagt caaggagaac accattgtat
      541 ttacagtagt tagtaatttg ttcgcaatac gatttattta tttataccta taactatcac
      601 aaacagggta catgtttgat ttgcaatggg taaattggaa caaatacata tacaagattt
      661 ttaagatggt cggtttcact gatttgtagt taggaatctg ttgtcaacat ttttttatta
      721 gttgataact cctttctagc cttttgttgg gttggtgagt tgcaaataat tcattttgtt
      781 ctatggtacg tgtcaaaatg ggcaatttgg gtcaatgaac acttctgtat tgccatgatt
      841 ccaatctaga tgatagtata ttttaaatac tataaataac ttaacattgt ttaatatttt
      901 tagttatttt atgaaggcta atattgtcgc agagatgcca tataaggttt ggtgttcttc
      961 tctttctttc tcgggtcata ttttttcact tgcatatatc tttcaagttt cttggaatta
     1021 tatttgtgaa tgcttctttc attaattgag gggagtcccg taatcaactc catgttgttg
     1081 cacttgcatc aaagtagtgt tgcattctta aagctcaagg taccaggttc ttggatgtta
     1141 aagtcaagct agaaatgaaa aaaggaaatc ggctaaatgt ggaactcact tgctatgtag
     1201 aaattgagag tgccaaagca gtcgtacgaa ggaccagaga gtctctggat gagcaagaga
     1261 gggtattaca tacctcttaa aaaaatgaag gaaattgtgg atgaaatcca acagactaag
     1321 agaatcagtt tgctgctcag ggaagattgc tcagatggaa ttcgaaagtg gaagcggata
     1381 aaaagcatac gttctgatga gatggttaaa aagagtaaga gtattgctga gccagacaag
     1441 ctgtttgaaa ttgagatgga gttggatgaa acagaaataa ctcttacatc aatgggtgtc
     1501 atgacagtat cgcgaacatg ttgtaaattg gatgacaact tcattgtttt atagcgagaa
     1561 taagagaatc tcaaatagta gtgataacaa tttaattaca ccatgtaatt aactttacta
     1621 tcatgatccc gcgaagtcgc gggtattaca ctagtattat taaattcgtt ctactattct
     1681 gggagaccta catggctaca tcatagtatt ttagtattta tttattttta tttatttaat
     1741 ttatattccg gagtatactc cacaaaatat ataattgatg aagggtgtat gtgtgtactt
     1801 caaactttga atta
//
LOCUS       XM_071830203            1818 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839982), transcript variant X2, mRNA.
ACCESSION   XM_071830203
VERSION     XM_071830203.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1818
                     /gene="LOC139839982"
                     /note="uncharacterized LOC139839982; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839982"
     CDS             1289..1558
                     /gene="LOC139839982"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686304.1"
                     /db_xref="GeneID:139839982"
                     /translation="MKEIVDEIQQTKRISLLLREDCSDGIRKWKRIKSIRSDEMVKKS
                     KSIAEPDKLFEIEMELDETEITLTSMGVMTVSRTCCKLDDNFIVL"
ORIGIN      
        1 tatgtgtaac ttactcataa catatgctga atttaaggat atgttacata tcaatgctcg
       61 acttacttaa atgtcaatgt cagttgctaa tccgttttta tcttaacttg cagttgtccc
      121 gcttctaact ttgtcattca aatcattgaa aagatttttg catgagtaga aattctctcc
      181 tcttatttaa atatttttaa aattcatgaa actaggctat aaagatagag gtcagttatc
      241 acatacagtc atcattaaca attaactgaa atcaaagaga tataaagcac gaggaagata
      301 aaaataggtc agatatatag gtcacatata tttagttata tatagtgttc ttgcttcatt
      361 gtcaaatgtt attgcacatg ctatggacta atatttacca taaaattaag tcagggtaac
      421 accattgtat ttacagtagt tagtaagctt actgttaagt aaagtcaggg taaacaccat
      481 tgtatttaca atagttagta agcttaccat tttaaaaagt caaggagaac accattgtat
      541 ttacagtagt tagtaatttg ttcgcaatac gatttattta tttataccta taactatcac
      601 aaacagggta catgtttgat ttgcaatggg taaattggaa caaatacata tacaagattt
      661 ttaagatggt cggtttcact gatttgtagt taggaatctg ttgtcaacat ttttttatta
      721 gttgataact cctttctagc cttttgttgg gttggtgagt tgcaaataat tcattttgtt
      781 ctatggtacg tgtcaaaatg ggcaatttgg gtcaatgaac acttctgtat tgccatgatt
      841 ccaatctaga tgatagtata ttttaaatac tataaataac ttaacattgt ttaatatttt
      901 tagttatttt atgaaggcta atattgtcgc agagatgcca tataaggttt ggtgttcttc
      961 tctttctttc tcgggtcata ttttttcact tgcatatatc tttcaagttt cttggaatta
     1021 tatttgtgaa tgcttctttc attaattgag gggagtcccg taatcaactc catgttgttg
     1081 cacttgcatc aaagtagtgt tgcattctta aagctcaagg taccaggttc ttggatgtta
     1141 aagtcaagct agaaatgaaa aaaggaaatc ggctaaatgt ggaactcact tgctatgtag
     1201 aaattgagag tgccaaagca gtcgtacgaa ggaccagaga gtctctggat gagcaagaga
     1261 gggtattaca tacctcttaa aagtagaaat gaaggaaatt gtggatgaaa tccaacagac
     1321 taagagaatc agtttgctgc tcagggaaga ttgctcagat ggaattcgaa agtggaagcg
     1381 gataaaaagc atacgttctg atgagatggt taaaaagagt aagagtattg ctgagccaga
     1441 caagctgttt gaaattgaga tggagttgga tgaaacagaa ataactctta catcaatggg
     1501 tgtcatgaca gtatcgcgaa catgttgtaa attggatgac aacttcattg ttttatagcg
     1561 agaataagag aatctcaaat agtagtgata acaatttaat tacaccatgt aattaacttt
     1621 actatcatga tcccgcgaag tcgcgggtat tacactagta ttattaaatt cgttctacta
     1681 ttctgggaga cctacatggc tacatcatag tattttagta tttatttatt tttatttatt
     1741 taatttatat tccggagtat actccacaaa atatataatt gatgaagggt gtatgtgtgt
     1801 acttcaaact ttgaatta
//
LOCUS       XM_071830204            1812 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839982), transcript variant X3, mRNA.
ACCESSION   XM_071830204
VERSION     XM_071830204.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1812
                     /gene="LOC139839982"
                     /note="uncharacterized LOC139839982; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839982"
     CDS             1248..1502
                     /gene="LOC139839982"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071686305.1"
                     /db_xref="GeneID:139839982"
                     /translation="MSKRGYYIPLKKMKEIVDEIQQTKRISLLLREDCSDGIRKWKRI
                     KSIRSDEMVKKSKSIAEPDKLFEIEMELDETEITLIRVGS"
ORIGIN      
        1 atgtgtaact tactcataac atatgctgaa tttaaggata tgttacatat caatgctcga
       61 cttacttaaa tgtcaatgtc agttgctaat ccgtttttat cttaacttgc agttgtcccg
      121 cttctaactt tgtcattcaa atcattgaaa agatttttgc atgagtagaa attctctcct
      181 cttatttaaa tatttttaaa attcatgaaa ctaggctata aagatagagg tcagttatca
      241 catacagtca tcattaacaa ttaactgaaa tcaaagagat ataaagcacg aggaagataa
      301 aaataggtca gatatatagg tcacatatat ttagttatat atagtgttct tgcttcattg
      361 tcaaatgtta ttgcacatgc tatggactaa tatttaccat aaaattaagt cagggtaaca
      421 ccattgtatt tacagtagtt agtaagctta ctgttaagta aagtcagggt aaacaccatt
      481 gtatttacaa tagttagtaa gcttaccatt ttaaaaagtc aaggagaaca ccattgtatt
      541 tacagtagtt agtaatttgt tcgcaatacg atttatttat ttatacctat aactatcaca
      601 aacagggtac atgtttgatt tgcaatgggt aaattggaac aaatacatat acaagatttt
      661 taagatggtc ggtttcactg atttgtagtt aggaatctgt tgtcaacatt tttttattag
      721 ttgataactc ctttctagcc ttttgttggg ttggtgagtt gcaaataatt cattttgttc
      781 tatggtacgt gtcaaaatgg gcaatttggg tcaatgaaca cttctgtatt gccatgattc
      841 caatctagat gatagtatat tttaaatact ataaataact taacattgtt taatattttt
      901 agttatttta tgaaggctaa tattgtcgca gagatgccat ataaggtttg gtgttcttct
      961 ctttctttct cgggtcatat tttttcactt gcatatatct ttcaagtttc ttggaattat
     1021 atttgtgaat gcttctttca ttaattgagg ggagtcccgt aatcaactcc atgttgttgc
     1081 acttgcatca aagtagtgtt gcattcttaa agctcaaggt accaggttct tggatgttaa
     1141 agtcaagcta gaaatgaaaa aaggaaatcg gctaaatgtg gaactcactt gctatgtaga
     1201 aattgagagt gccaaagcag tcgtacgaag gaccagagag tctctggatg agcaagagag
     1261 ggtattacat acctcttaaa aaaatgaagg aaattgtgga tgaaatccaa cagactaaga
     1321 gaatcagttt gctgctcagg gaagattgct cagatggaat tcgaaagtgg aagcggataa
     1381 aaagcatacg ttctgatgag atggttaaaa agagtaagag tattgctgag ccagacaagc
     1441 tgtttgaaat tgagatggag ttggatgaaa cagaaataac tcttattcgg gtcggatcct
     1501 gatgtaaatt gtttgagatc tgaagaagaa aacctgcaac ttcaatggaa cctccaactg
     1561 gggtttggaa aacattaggg cagttcattc ttttcctgcc ttatttcatt ggtctacttt
     1621 ctcttggctt cattaaaggt taacccttta taacttttaa tgtttttttt attaattttg
     1681 tttgattttg gattgatgtt atctggactt attcatgaaa cccttttcaa gttagagtta
     1741 gatgagctga aaaagaaaaa aaaggaaaaa ggaaaaaaaa gagtgaaatg acgaaaatac
     1801 cgctggttac ta
//
LOCUS       XM_071830205            1520 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839982), transcript variant X4, mRNA.
ACCESSION   XM_071830205
VERSION     XM_071830205.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1520
                     /gene="LOC139839982"
                     /note="uncharacterized LOC139839982; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839982"
     CDS             1249..1494
                     /gene="LOC139839982"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071686306.1"
                     /db_xref="GeneID:139839982"
                     /translation="MSKRGYYIPLKKMKEIVDEIQQTKRISLLLREDCSDGIRKWKRI
                     KSIRSDEMVKKSKSIAEPDKLFEIEMELDETEITLKD"
ORIGIN      
        1 tatgtgtaac ttactcataa catatgctga atttaaggat atgttacata tcaatgctcg
       61 acttacttaa atgtcaatgt cagttgctaa tccgttttta tcttaacttg cagttgtccc
      121 gcttctaact ttgtcattca aatcattgaa aagatttttg catgagtaga aattctctcc
      181 tcttatttaa atatttttaa aattcatgaa actaggctat aaagatagag gtcagttatc
      241 acatacagtc atcattaaca attaactgaa atcaaagaga tataaagcac gaggaagata
      301 aaaataggtc agatatatag gtcacatata tttagttata tatagtgttc ttgcttcatt
      361 gtcaaatgtt attgcacatg ctatggacta atatttacca taaaattaag tcagggtaac
      421 accattgtat ttacagtagt tagtaagctt actgttaagt aaagtcaggg taaacaccat
      481 tgtatttaca atagttagta agcttaccat tttaaaaagt caaggagaac accattgtat
      541 ttacagtagt tagtaatttg ttcgcaatac gatttattta tttataccta taactatcac
      601 aaacagggta catgtttgat ttgcaatggg taaattggaa caaatacata tacaagattt
      661 ttaagatggt cggtttcact gatttgtagt taggaatctg ttgtcaacat ttttttatta
      721 gttgataact cctttctagc cttttgttgg gttggtgagt tgcaaataat tcattttgtt
      781 ctatggtacg tgtcaaaatg ggcaatttgg gtcaatgaac acttctgtat tgccatgatt
      841 ccaatctaga tgatagtata ttttaaatac tataaataac ttaacattgt ttaatatttt
      901 tagttatttt atgaaggcta atattgtcgc agagatgcca tataaggttt ggtgttcttc
      961 tctttctttc tcgggtcata ttttttcact tgcatatatc tttcaagttt cttggaatta
     1021 tatttgtgaa tgcttctttc attaattgag gggagtcccg taatcaactc catgttgttg
     1081 cacttgcatc aaagtagtgt tgcattctta aagctcaagg taccaggttc ttggatgtta
     1141 aagtcaagct agaaatgaaa aaaggaaatc ggctaaatgt ggaactcact tgctatgtag
     1201 aaattgagag tgccaaagca gtcgtacgaa ggaccagaga gtctctggat gagcaagaga
     1261 gggtattaca tacctcttaa aaaaatgaag gaaattgtgg atgaaatcca acagactaag
     1321 agaatcagtt tgctgctcag ggaagattgc tcagatggaa ttcgaaagtg gaagcggata
     1381 aaaagcatac gttctgatga gatggttaaa aagagtaaga gtattgctga gccagacaag
     1441 ctgtttgaaa ttgagatgga gttggatgaa acagaaataa ctcttaaaga ttaagttgtc
     1501 atccagacat ataccaagtt
//
LOCUS       XM_071830206            3019 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides myosin-binding protein 2
            (LOC139839984), mRNA.
ACCESSION   XM_071830206
VERSION     XM_071830206.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3019
                     /gene="LOC139839984"
                     /note="myosin-binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139839984"
     CDS             27..2420
                     /gene="LOC139839984"
                     /codon_start=1
                     /product="myosin-binding protein 2"
                     /protein_id="XP_071686307.1"
                     /db_xref="GeneID:139839984"
                     /translation="MAANKFATIVHKNSNRITLVLIFAVLEWTLIILLLLNSIFSYFI
                     IKFARFFGLKPPCLWCIRLDRFFEPELKNSHRDLLCDLHSKEVSQLGFCLKHKKLAES
                     HDMCDVCSSEFGEKSNNLSFSKETKFDFVECSCCGIEFERKTFEDSSYFVINPSWDLL
                     GFSKSNPVIDLIGSDLENEIVGEKQEVQIQGNEAEVTEVEAIKEDLIKFDKKDDSTLN
                     SGTHEQDLEFFLDYSGNQLVPIETFDPIDNEEQEFGDFQEAQVVSELKSETVTEEIVK
                     QSDETVSVIERTEELSKFAGLDSMKFEETESSLVFHANLSDFTDEKPDIIESNRTMST
                     IEEVEETEEINSEHEEAEVSIGTEIPVLDSCDEMKAQDNFTLYYLSHEESSKSTHDLD
                     FSLEYGFEEDEKTRELTNLNQINNPMLMIERKESMVDDSIDGSEMEGGDPINTNEKLK
                     SALRAERKSLQALYIELEEERSASAVAASETMAMINRLQEEKAAMQMEALHYQRMMEE
                     QSEYDQEALQLLNDLMVKKDKELEIYRKKVLEYETKERARFLGNGVKNGTCSASCSHS
                     EDGDGMWVDVNHEPKEHETFSDNKDNKNHNTLVDSVISLDSSFVDFEDERMSILEQLK
                     FLEEKLFTLSDEEDRYFSELRQIEDYFEENGKHVNGNYSYGSQQVNGITYETQDQDRR
                     TGKRLLPLFEALDNEIDDVVIMSNGHENGVHSNKMENSAITLFELQKRRIDIEEEVDQ
                     LYVRLQALEADREFLKHCIGSLKKGDKGMELVQEILQHLRDLRDVDLRAKNFTDGTL"
     misc_feature    1365..1640
                     /gene="LOC139839984"
                     /note="Region: Zein-binding; pfam04576"
                     /db_xref="CDD:428019"
ORIGIN      
        1 acaccaaaaa cagagcatca aacaatatgg ctgcaaacaa atttgcaaca attgtacata
       61 aaaattcaaa caggatcaca cttgttctca tttttgctgt tcttgaatgg acactcataa
      121 ttcttcttct tctcaactca atattttcat atttcatcat taaattcgct cgatttttcg
      181 gtctaaaacc accctgtctc tggtgtattc gtcttgatcg ttttttcgaa cccgaactca
      241 agaattcaca tagagatctt ctatgtgatc ttcattctaa agaagtttct caacttggat
      301 tttgcttgaa acataaaaag ttagcagaat cccatgatat gtgtgatgtt tgctcatctg
      361 aattcggtga aaagtcgaat aatttatcgt tttcgaagga gacaaagttt gattttgttg
      421 aatgttcttg ttgtggaatt gagtttgaaa ggaaaacttt tgaagattct tcttattttg
      481 ttattaatcc ttcatgggat cttttggggt tttcgaaaag taatccggtt atcgatttaa
      541 tcggatcgga tttggagaat gaaattgttg gtgaaaaaca ggaagttcaa atacagggga
      601 atgaagcaga ggtaacagaa gttgaagcaa ttaaggagga tttaattaaa tttgataaaa
      661 aggatgactc aactttaaat tcaggaacac atgaacaaga tcttgaattt ttcttggatt
      721 acagtgggaa tcagttggta ccaatcgaaa cattcgaccc aatcgataat gaagaacaag
      781 aattcgggga ttttcaggaa gctcaagttg tatcagaatt gaaatccgaa acagtaaccg
      841 aagaaattgt aaagcagagc gatgaaacgg tttctgtaat tgagagaaca gaggaattat
      901 caaaatttgc agggcttgat tcaatgaaat ttgaagaaac tgaaagttct ttagtttttc
      961 atgcaaattt aagtgatttt actgatgaaa aacctgatat tattgaatcg aatcgtacta
     1021 tgtcgactat tgaagaagtt gaagaaacag aagagattaa ttcagaacat gaagaagcag
     1081 aggtttcaat tggaacagag ataccagttt tggattcatg tgatgagatg aaagctcaag
     1141 ataacttcac tttgtattat ttatcacatg aagaatcttc aaaaagtact catgatttgg
     1201 attttagtct tgaatatggt tttgaagaag atgaaaaaac aagggaatta acaaacttga
     1261 atcaaataaa taacccaatg ttgatgattg aaagaaaaga atcaatggtg gatgattcaa
     1321 ttgatggaag tgaaatggag ggtggagatc caattaacac aaatgagaag cttaagtcgg
     1381 ctttaagagc cgaaaggaaa tcattacaag cgttgtatat cgaattagaa gaagaacgaa
     1441 gtgcttcagc agtggctgct agtgaaacaa tggctatgat taaccgtctt caagaagaaa
     1501 aagccgcaat gcaaatggaa gcgttgcatt atcaacgaat gatggaagaa caatcggaat
     1561 atgatcaaga agctttgcaa cttttgaatg atcttatggt aaagaaggat aaagaattgg
     1621 aaatatatcg aaagaaagtt ttagaatacg aaacaaagga gagggcgcgg tttttaggta
     1681 atggtgtgaa aaatgggacg tgttcggctt cttgtagtca ttcagaagat ggggacggaa
     1741 tgtgggttga tgtgaatcac gagccgaaag aacatgaaac gtttagcgac aataaagaca
     1801 acaagaatca taatacactc gtcgatagtg taataagtct tgattcgtcg tttgttgact
     1861 ttgaagatga gaggatgtcg attctcgaac aacttaagtt tttagaagag aagcttttca
     1921 ctttgagcga cgaagaagat cgatatttta gcgagttaag gcaaatagaa gattactttg
     1981 aagagaatgg gaaacatgta aatgggaatt atagttatgg tagtcaacaa gtcaacggta
     2041 ttacatacga gacacaagat caagatcgac gaacgggaaa aagacttctt cctttgttcg
     2101 aagcgcttga caatgagatc gacgatgtag tgatcatgtc aaatggacat gaaaacgggg
     2161 tccattcaaa caagatggaa aatagtgcga tcacattatt cgagttgcaa aaaaggagaa
     2221 ttgatattga agaggaagtg gatcaactat atgtaaggtt acaagcttta gaagccgata
     2281 gggagttttt aaaacattgc attggatcgt taaagaaagg cgataaagga atggaacttg
     2341 ttcaagaaat cttgcaacat ttacgcgatc ttcgagatgt tgatcttcga gcgaagaact
     2401 tcactgatgg cacattatga tcttcttaga gactgttaat ggtgaaaatt gaggtcttgg
     2461 cttaaagaca atgtaaggaa ggggtcatat atgaaaggct aagctgccaa acttctgttc
     2521 ttttcttggt ttgaaggttt tttttttttt ttttttttca ttttcattat tttgatttca
     2581 aagtaacata tatattttta aagctaaaac agaaaagttg aggataatat atagctatta
     2641 ctatgtcatg tatatggtat taaagcatta ttattctgaa tttaatcatt ctgttacaaa
     2701 aaagaaaggt atatttcaag aagaaaaaaa aaccaaattt tccttgtggg tcaggtggaa
     2761 tttcatctca gccttttgag gggaaaaggt ggatgatgaa ttcatgtgtt catcacctta
     2821 taggaagtta ggtgtaggga ttatattatg ttattttttc ttagattttt gaatttattt
     2881 tggagtatta agaaagggaa ggggccctat tcttggtcac ttcaagtgta atttgtaagt
     2941 atgtaaattg agtattttgt ttagagttaa ttgtatgtgt ggtattaata tttaatatta
     3001 ttttttaaaa atttcagtg
//
LOCUS       XM_071830207            2393 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839985), mRNA.
ACCESSION   XM_071830207
VERSION     XM_071830207.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2393
                     /gene="LOC139839985"
                     /note="uncharacterized LOC139839985; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839985"
     CDS             58..2124
                     /gene="LOC139839985"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686308.1"
                     /db_xref="GeneID:139839985"
                     /translation="MSSDDWPDWLPADWYMQARKVNEKKVKCYIDPEGHRFYSKPQVF
                     EHLKKNNNGTTSTNTQNANGSGVDISMEQDVDHANEAPVSGENHTKLTTRSSRKKPQE
                     GEGAVAGDGSPSEPEASEMKSDDSSWLPDGWTMEIKTRKAGSTTGKRFKCYTDPISGQ
                     KFFSKPQVLSYLAKINGNAAGQREGSPVPIIATPISAWQSSIEPDMSQSYNTPKVKKN
                     SSGTKIGSARLSPKYEVVSRTPVEGLPSGWIKELRRRTRGAVKKTDPYFIDPLSEYVF
                     FSKRDALRYLESGDVKNCVIKPLKRDMNEDSNLNLSSAGGEMASQPPSKETETPEPLT
                     TNGTETEMKTDEGTIECPKPVRSISGGSFSALKQEVIDWLPEGWTFEVLSKSSGQKYK
                     VFMESASGKKFYSKPQVLSYLSNGSSSNSRKRKENKPVAAYDSVQNSGSGDVGRPKRV
                     KKKNDDTPKSKSKAEADYEEVVTASPADGLPPGWIKEIRTKIYSTHQRRDPFYTDPVS
                     GYIFRSKLDAMRYLETGDVNLCAIRPKIKDKDGNEVTVTGSVQKPATTETDNQLDEGK
                     GGENNDSSTPAKGKASSRLANTPARSSRRVKTETDPSSGGPTEDNGPVPEKQVSGINL
                     EKLADDEDQLCYDIPEDENWPDIDFAVKTLNSEILFNGEPTSAPFHEGSVRADTSVGE
                     TPNKVN"
     misc_feature    430..>582
                     /gene="LOC139839985"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; Region: MBD;
                     cl00110"
                     /db_xref="CDD:469618"
     misc_feature    order(463..465,469..471,475..477,499..501,505..507,
                     535..537,544..546,556..558)
                     /gene="LOC139839985"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     misc_feature    787..>924
                     /gene="LOC139839985"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; Region: MBD;
                     cl00110"
                     /db_xref="CDD:469618"
     misc_feature    order(808..810,814..816,820..822,841..843,847..849,
                     877..879,886..888,898..900)
                     /gene="LOC139839985"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     misc_feature    1171..>1299
                     /gene="LOC139839985"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; Region: MBD;
                     cl00110"
                     /db_xref="CDD:469618"
     misc_feature    order(1198..1200,1204..1206,1210..1212,1231..1233,
                     1258..1260,1267..1269,1279..1281)
                     /gene="LOC139839985"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     misc_feature    1483..>1626
                     /gene="LOC139839985"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; Region: MBD;
                     cl00110"
                     /db_xref="CDD:469618"
     misc_feature    order(1516..1518,1522..1524,1528..1530,1549..1551,
                     1555..1557,1585..1587,1594..1596,1606..1608)
                     /gene="LOC139839985"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     polyA_site      2393
                     /gene="LOC139839985"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcaatacctt ttacacacac tcacacactc acaaaaaacg ttacttttca cccgaaaatg
       61 tcttccgatg actggccgga ttggcttcct gctgactggt atatgcaagc cagaaaagtc
      121 aatgaaaaga aagtcaaatg ctacattgat cctgaaggac acaggttcta ttcgaagccg
      181 caagtgttcg agcatctcaa gaagaataac aatggcacaa catctacaaa cactcaaaat
      241 gctaatggtt cgggtgtaga catatccatg gagcaagatg ttgaccatgc aaatgaagct
      301 cctgtatcag gagaaaacca tacgaaactg acaactagaa gtagtaggaa gaaaccccag
      361 gaaggtgagg gtgctgtagc cggagacggg tctccatctg aacccgaagc atccgaaatg
      421 aaaagtgatg attcaagttg gctacctgac ggatggacta tggaaatcaa gactcgaaaa
      481 gctggtagca caactggaaa gagattcaag tgttacacgg atccaattag tggacagaag
      541 ttcttttcaa agccgcaggt tctgagttat cttgccaaaa taaatggcaa tgcagccgga
      601 cagagagaag ggagtcctgt ccctattatt gccactccga tatcagcttg gcaatcgtct
      661 atagagcctg atatgtccca gtcatataat acgcctaaag tcaagaagaa ttcgtccgga
      721 acgaagatag gaagtgcccg cttgtcccct aaatatgaag ttgtgtcaag gactccggta
      781 gaagggttgc cctccgggtg gataaaggaa cttagaagga gaacgcgtgg agctgtgaag
      841 aaaactgacc cgtacttcat agatcctttg agtgaatacg tctttttctc aaaaagggat
      901 gctttgcgct atttggaatc tggagatgtt aaaaattgtg tcataaaacc actgaaaagg
      961 gatatgaatg aagactctaa tcttaatttg agttctgctg gaggagaaat ggcttcacaa
     1021 cctccatcca aagaaaccga aactcccgaa ccgttaacaa caaacggtac tgaaacggag
     1081 atgaagacag acgaaggaac tatagagtgc ccgaaaccgg ttcgctctat aagtggagga
     1141 tctttctctg cactgaagca agaagttatt gattggctac ctgaaggatg gacctttgaa
     1201 gtgctttcta aatcttctgg acagaaatac aaggtcttta tggaatctgc aagtgggaaa
     1261 aagttttatt cgaagccgca agtccttagc tatctttcga atggcagtag cagcaattcc
     1321 agaaagagaa aagaaaataa acccgttgct gcgtatgatt cggtccaaaa ctctggatct
     1381 ggtgatgttg ggcggcccaa aagggtcaaa aagaagaatg atgacacacc aaagtccaag
     1441 tccaaggccg aggccgatta cgaagaagtt gtgacagcat ctccagcaga tgggctgcca
     1501 cctggatgga ttaaagaaat tagaaccaag atttattcaa cccaccaaag acgtgatccg
     1561 ttttacacgg accctgtgag tggctacatc tttcgctcca aattggatgc tatgcgctat
     1621 ttggagactg gagacgtaaa cttgtgtgct attagaccaa agattaagga taaagacgga
     1681 aatgaagtta ctgtaacagg cagtgtgcaa aaaccagcga caactgaaac tgacaatcaa
     1741 ctcgatgaag gaaaaggagg agagaacaat gattcatcaa ctcctgcaaa aggtaaggcg
     1801 tcgagtaggc tcgcaaacac accggctcga tcttcaagaa gggtcaaaac cgagactgac
     1861 ccatcaagtg gtgggcccac tgaggataat gggccagttc cagagaagca ggtatcaggg
     1921 ataaatttgg aaaaactagc tgatgatgag gaccaactct gttatgacat tccagaggac
     1981 gaaaactggc cagatattga ctttgcggtc aaaaccctaa acagtgaaat tctgtttaat
     2041 ggtgaaccaa catctgctcc ttttcatgaa ggaagtgttc gggcggacac aagtgtgggc
     2101 gaaactccga ataaggtgaa ctgaggagcg atgaatagtg tgtgtgtttt cttttgatga
     2161 ctttagtaat ggtctatgat gtgatctatt tgaactcgac tgtgtattgc ttgttaactc
     2221 aagtactagc attttgtggg tgctgtaatc accatttatg gtgaatttta tgaaccgcct
     2281 tttatcttcg tcaatgacga accttagtgt tagatctgaa tttgtactag tatgactgac
     2341 tcgactgatg gagatgttat gtcgccaaat caatcagtac gtcgcttatt tct
//
LOCUS       XM_071830208            2212 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative clathrin assembly
            protein At2g01600 (LOC139839986), mRNA.
ACCESSION   XM_071830208
VERSION     XM_071830208.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2212
                     /gene="LOC139839986"
                     /note="putative clathrin assembly protein At2g01600;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 14 Proteins"
                     /db_xref="GeneID:139839986"
     CDS             209..1930
                     /gene="LOC139839986"
                     /codon_start=1
                     /product="putative clathrin assembly protein At2g01600"
                     /protein_id="XP_071686309.1"
                     /db_xref="GeneID:139839986"
                     /translation="MGTMQTWRKAYGALKDQTTVGLAHVNSDFKDVDVAIVKATNHVE
                     CPPKERHIRKILAYTSAIRPRADVQYCLHALARRLAKTRNWTVALKTLIVIHRSLREG
                     DPTFREELLNFQQRGRVLQLANFKDDSSPIAWDCSAWVRTYGLFLEERLECFRILKYD
                     IEAEHIPRPAQGQENKGYSKTRDLDSEELLEQLPSLQQLLYRLMGCRPEGAAVGNYLI
                     QYALALVLKESFKIYCAVNDGIINLIDKFFEMPRHEAIKALDIYKRAGQQAGSLSDFY
                     EVCKGLELARNFQFPVLREPPQSFLATMEEYIREAPRLVAGPQPLEYPERLMLTYKPE
                     EDNSPHEEDTDSHVDEPKPQTMNDLIASDDVPEPTQSVAPPTFNSRDPDDLLGLNFDA
                     PTGSVIEDSNALALAIVPSDTTSTGSGFQAKEFDPTGWELALVSTPSTDISSVQDRQL
                     AGGLDSLTLNSLYDEGAYRASQQPVYGSPAPNPFEAADPFGMSGPSLQNQMTTPYQPN
                     PFGPYQPAATYAPSQPQPNLMMAPQPQPNHMMGPPNPFVDSGFGAFPVNNGTHPQANN
                     PFGTTLL"
     misc_feature    299..1132
                     /gene="LOC139839986"
                     /note="ANTH domain; Region: ANTH; pfam07651"
                     /db_xref="CDD:400137"
     misc_feature    order(320..322,350..352,356..361)
                     /gene="LOC139839986"
                     /note="PtdIns(4,5)P2-binding site [chemical binding];
                     other site"
                     /db_xref="CDD:340767"
     misc_feature    1595..>1855
                     /gene="LOC139839986"
                     /note="Ty transposon capsid protein; Region: TYA;
                     pfam01021"
                     /db_xref="CDD:425992"
     polyA_site      2212
                     /gene="LOC139839986"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaaaataaa aagtagtaac agcctaaaat tgctgtgcag ttgtctttct ttggattcca
       61 tatcacaaga agaaacacaa ttcattcata atcatcatcg atctatatac tcgccgatct
      121 aatcgcttac tccttccaat tcaaaaccca cacacataca tacatataca tacagatttt
      181 gatatataca tacatacaga ctgaaaccat gggtactatg cagacatggc ggaaagccta
      241 cggcgctctc aaagatcaaa ccaccgtcgg tttagcacat gtcaatagtg atttcaagga
      301 tgttgatgtt gcaattgtta aggctactaa tcatgttgag tgtccgccca aagaaagaca
      361 catcagaaag atattggcgt atacgtctgc gattcggcct cgagcggatg tgcagtactg
      421 tttacatgct ttagcaaggc gattggctaa gactcgtaat tggacggtgg cactaaagac
      481 actgatagtt atccatagga gtctaaggga gggcgatcct acttttcgag aagaacttct
      541 aaattttcaa cagagagggc gtgttcttca actagccaat ttcaaggacg attcaagtcc
      601 cattgcttgg gattgttctg cctgggtgcg tacgtatgga cttttcttag aggaacgact
      661 tgagtgtttt agaattttga agtatgatat tgaagccgaa catatcccaa gaccagctca
      721 aggtcaagag aataagggtt atagcaaaac aagggattta gatagtgaag aactgttgga
      781 acaactgcct tcattacagc agctattgta tcgtcttatg ggatgcaggc ccgagggtgc
      841 ggctgttggc aattatttga tacaatacgc cctggctttg gtacttaaag agagttttaa
      901 aatatattgt gctgtgaatg atggaattat caatcttatt gataagtttt tcgagatgcc
      961 aagacatgaa gctattaaag ccttggatat atacaaaaga gccggtcagc aggctgggag
     1021 cctttccgat ttttatgaag tttgcaaagg attggagctt gctagaaatt tccagtttcc
     1081 tgttctgaga gagcctccgc aatcttttct tgcaacaatg gaagaatata taagagaggc
     1141 accacgtttg gttgctggtc cacagccgtt agaatatcca gaaaggctta tgttaacata
     1201 taaaccagaa gaagataact cgcctcacga agaagataca gattcacacg ttgatgaacc
     1261 taaaccgcaa actatgaacg atttgattgc ttcagatgac gttcccgagc ctactcaatc
     1321 ggtggccccg ccaactttta acagccggga ccctgatgat ttattgggtt taaattttga
     1381 tgcgcctacc ggatcagtta ttgaggatag caatgccctg gctcttgcca ttgttccatc
     1441 tgatactacg tctactgggt ctggttttca agcaaaagag tttgatccaa ctggttggga
     1501 acttgcattg gtttccacac ctagcaccga tatctcttca gttcaggaca ggcaactggc
     1561 tggtggattg gactcgctca ccctcaacag tttgtacgat gaaggagcat atagagcctc
     1621 ccagcagccc gtatacggat ctccagctcc taacccattt gaagcagctg acccgtttgg
     1681 tatgtcgggt ccatcacttc aaaatcaaat gacaacacca tatcaaccga acccctttgg
     1741 tccatatcaa cctgctgcca cctatgcacc ttctcagccg caacccaatt tgatgatggc
     1801 gccacagccg caacccaatc atatgatggg cccacctaac ccttttgtcg attcagggtt
     1861 tggtgcgttc ccagtcaaca atggtactca tccacaagcc aacaatcctt ttggaacaac
     1921 cttattatga gacaataaaa tatgtgaaag aaaaaaaaca cagaagtttg ttagtatata
     1981 tatttgatga tgatgatgat gatgatgatg atgaggtata tatctctcat gcatggttat
     2041 gaatttgatt aagaaatagt tacgatattc ttgttagtca taaggtttct gcgagtcgta
     2101 tttgtaattg gtgactcagt gggttgataa tttggttggc tatgtgattt gtgcttgtaa
     2161 acattgctac tttactgttt ctctaatggt gtcaatttac atttgtctgt ta
//
LOCUS       XR_011757168             899 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839987), ncRNA.
ACCESSION   XR_011757168
VERSION     XR_011757168.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..899
                     /gene="LOC139839987"
                     /note="uncharacterized LOC139839987; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839987"
     ncRNA           1..899
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839987"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839987"
ORIGIN      
        1 atatatatat atatatatat atatatatat acacacatat acatacatac atatcgtgtt
       61 atggcgagta ctcgatttat attctttaag tttataagat ggacgactag gggatgggaa
      121 ctcaccagga aatgatgtag ccctattacg acaaattcaa tgattggttt caaactgctt
      181 ttggctcgct gaaatcatca taacgttttt gtttggaata gttgttacgg ttttaaggaa
      241 tgtacactag tttgctgttt tcttattgga ggttggatta cacctaataa atggtgcttt
      301 ggaaggagag caacagaatc cgtggaaaca tactagctag aaacattttc aggtatccat
      361 atccagagac acattagggg ccatgttgag atcaatggca tatatccgtg agcagctctc
      421 aaatgcagtg cgcttatgga gataatttgt acagatgatg atgaaaggaa tgagatcgta
      481 tccgggatcc gatctttttt tatttattat tgaagacgat aaaaacgatg atgcaagtgt
      541 aagatgatgc caccgctgtt gtcgctcctc tgttccatgg ttaatgaaga agatttatgt
      601 tctgatttaa aaaatacgat tccttagctt cgtcttagta ccaaagcttt acaattaaat
      661 gtaattccta aaattactgt gatcgattta caggttcgtt atatatctac actgaactgt
      721 tcacttgttc aggcccgcgc aagtgtttgt atgtgcaggc acgagtgttc acaagtgcac
      781 attaaatgtt cacgatggtt gttttatatt tgcaaacaag ttaaaattga tatccacaac
      841 atatgcacat aagaacacat gtttattggc ttcatggttt cataacatca gtactatag
//
LOCUS       XM_071830209            2741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839988), mRNA.
ACCESSION   XM_071830209
VERSION     XM_071830209.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2741
                     /gene="LOC139839988"
                     /note="uncharacterized LOC139839988; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839988"
     CDS             13..2559
                     /gene="LOC139839988"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686310.1"
                     /db_xref="GeneID:139839988"
                     /translation="MSIITLPPHFKFSFSSSIQSHRKPSSSIIIQRPKTIQNTHPFYS
                     FNSLDLNLSLTRPIITRVSCSSSSDSSGTSDDSASPKVSDFEASGSPMSGEGYVGLFI
                     RMLGLDNDPLDREQAVDALWKYSMGGKKCIDEIMNFRGSVFLTVNLLNSDSSVACEAA
                     AGLLRMISSVNTYRDLVAESGAIQEITGLLRRPSLTSEVKEQSLCVLSNLSVDEKLRA
                     QIANSEHLPLLIKFLDDEEMKVVEAAGGVLANLALSVTNHKIMVEAGVIPPLAKFLRN
                     DSEGSKVIRKEAQSALLELAKDDYYKILLIEEGLVVVPLIGATAYKAFKPSLHSWPSS
                     PDGSELNVKQNTKGPSRFGASELLLGLHVEDDKKTKLEEAKKNAIVGRTQQQFLARIG
                     AIEPEDESNKTRNQKFTILPWVDGVARLVLILELEDESAIAKAAEAIADASISEHMRT
                     SFKEAGAVKNLVRLIDHQSESVRLGVIRALERLSVSNDVCQRIEAEGVLSPLIRSLDD
                     SDASGNSTQMILNVLARILDPSKEMKSKFYEGPVNGSKKEWIGARSFTSNLNFSSQSV
                     KEEELSDSKFLSHLVEILNASSLDSQTKAASILEFLATLDTCREKIISLDIESALNSV
                     FRHKFFNGKEEDTDVENDFQELELQTLEAEEVGLAVSAASRLLTRLLDSDLFRKTVNA
                     SQLTDALRKILISKIPLQNKNWVAACLVKLGPLSDPVKLGSENPINTEVILYETIPRL
                     IEQIKDTYPLETRGTAVLELNRIISEGVADSTRVVARDGGIFQLAKLIEEGNDKVVEA
                     GLAILYNLSMDPENHPAMLAAGVVPTLRRIVLSERPQWVRALRLLRTLPT"
     misc_feature    <316..>813
                     /gene="LOC139839988"
                     /note="cellulose synthase-interactive protein;
                     Provisional; Region: PLN03200"
                     /db_xref="CDD:215629"
     misc_feature    406..519
                     /gene="LOC139839988"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    541..642
                     /gene="LOC139839988"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    order(613..615,625..627,637..639,736..738,748..750,
                     760..762,868..870,880..882)
                     /gene="LOC139839988"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293788"
     misc_feature    661..771
                     /gene="LOC139839988"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    787..888
                     /gene="LOC139839988"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     polyA_site      2741
                     /gene="LOC139839988"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acatcaatca gtatgtctat tataacctta cctccccatt tcaaattcag tttctcatct
       61 tcaattcaat cacatcgtaa accatcttct tcaattatca ttcaaaggcc aaaaacaatt
      121 caaaatacac acccttttta ttcattcaat tcattagacc ttaatctcag tcttacacgt
      181 ccaattatca caagggtcag ctgcagcagc agtagtgaca gcagtggcac atctgatgac
      241 tctgcatcac caaaagtttc tgattttgag gcaagcgggt caccaatgtc tggtgaaggg
      301 tatgtagggt tgtttattag gatgctcggt ttagataatg atcctttaga tcgagaacaa
      361 gcagttgatg cattatggaa atactctatg ggtggaaaga agtgtatcga tgaaatcatg
      421 aactttcgtg gctctgtttt ccttactgtg aatttgttga actcggattc tagtgttgcg
      481 tgtgaagcag ctgcaggcct attgagaatg atttcgtcag ttaacactta tagagattta
      541 gtagccgaaa gtggagctat acaagaaatt actggccttc tcagacgccc ctcgttgacc
      601 tctgaggtaa aggagcaaag tctatgtgtg ttgtcaaact tgtccgttga tgagaagctt
      661 cgagcccaaa ttgcaaattc cgaacacctt cctttactta ttaaattttt ggacgatgaa
      721 gaaatgaaag ttgtagaggc agccggtggg gttttggcta atttggcact gagtgttact
      781 aatcacaaaa ttatggtcga agcaggtgtt atcccgccat tggccaagtt tctaaggaac
      841 gactctgaag gatcaaaagt catcagaaaa gaagctcaaa gtgcgttgtt ggagcttgca
      901 aaagacgact attacaaaat tcttctaata gaagaaggcc tagtggtagt tccattaatt
      961 ggtgccaccg cgtacaaagc attcaaacca tctttacatt catggccttc gtcacctgac
     1021 ggttcagagc taaacgtgaa acaaaataca aaaggcccgt caaggtttgg tgcatcagaa
     1081 ttacttttag gattacatgt tgaagatgat aagaaaacaa agttagaaga agcaaaaaag
     1141 aatgcaatag ttggtcgaac acagcaacag tttcttgctc gtattggagc tatagaacca
     1201 gaagacgaga gtaacaaaac cagaaatcag aaatttacaa tcttgccatg ggttgacggt
     1261 gtagcccgtt tggttctgat tcttgaatta gaagatgaat cagctattgc taaagctgca
     1321 gaggctattg cggatgcatc tattagtgaa catatgagaa cgtcgtttaa ggaagcgggt
     1381 gctgtaaaga atcttgttcg gcttattgat catcaaagtg aatctgtcag attaggtgtc
     1441 atccgtgctt tagagaggct ttcagtcagt aatgatgttt gccagagaat tgaagctgag
     1501 ggtgttttga gtcctttaat aagatcactg gatgattcag atgcttctgg aaattcaact
     1561 caaatgatcc tgaacgttct tgctcggatt ttagatccta gcaaagagat gaaatcgaag
     1621 ttttatgaag gaccagtcaa tggatctaaa aaagaatgga ttggagctcg gtctttcacc
     1681 tcgaatttga atttcagctc acagtccgtt aaagaagagg agctatcaga ttcgaagttt
     1741 ctttctcacc tagtcgaaat tttaaacgct tcttcactgg attcgcaaac aaaagcagct
     1801 tccatacttg agttcttggc aacattagac acttgtagag agaagatcat ctcactcgat
     1861 attgaatccg ctttaaactc cgttttccgg cacaagttct tcaatggtaa agaagaagac
     1921 acagatgtcg aaaatgactt tcaagaactt gaattacaaa ccttagaagc tgaagaagtt
     1981 ggccttgctg tatctgcagc ttcaaggcta ctcacgcgac tgctcgattc cgaccttttc
     2041 cgaaaaaccg taaacgcatc tcaactcact gacgccctgc gtaagatcct catctcaaaa
     2101 atcccacttc aaaacaaaaa ttgggtcgct gcgtgccttg tcaaacttgg cccattatcc
     2161 gacccggtca aactcgggtc agaaaaccca ataaataccg aggttatact ctatgaaaca
     2221 atcccaagac taatagagca aattaaagat acttaccctc ttgaaacccg aggaactgcg
     2281 gttttggaac tcaacaggat aatttctgaa ggggtagcgg attctactcg ggtcgtggcc
     2341 cgtgatggtg gcatttttca gttagcgaag ttgatcgaag aaggaaacga taaggtggtt
     2401 gaagctggtt tggctatact ttataatttg agcatggatc ccgagaatca ccctgcaatg
     2461 ctggcggccg gtgtggtccc tacgctgagg aggatcgtgc tttcggagag accacaatgg
     2521 gttcgtgctc tgcggttgct tagaacattg cctacttgaa agtgagactc gaaagtttaa
     2581 tcatggttaa tattaatagt taatagttaa aaattttaaa agagatgatg ttgaattgct
     2641 gatgttgtcc cattttttgt tttgtagcag agattgtgat caagttttca tgtgtgtaaa
     2701 aaaccaaatg tgaaataata aacatatttg ttactactta a
//
LOCUS       XM_071830210            2136 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139839989), mRNA.
ACCESSION   XM_071830210
VERSION     XM_071830210.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2136
                     /gene="LOC139839989"
                     /note="uncharacterized LOC139839989; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139839989"
     CDS             92..1855
                     /gene="LOC139839989"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686311.1"
                     /db_xref="GeneID:139839989"
                     /translation="MEFESINEDIINNNNHGWQKVTYAKKHRKVPAKQQPAQPVKSLA
                     NGSSISTDDNVFKSIEKKSEERRKLIEAERLANSAIYDPVPVKSSKKKKNNYSDYDDS
                     DDNDDEVVVNGSVGNGVVEEKKTKAKKVKKPKVSVTEAAAKIDADDLASFLSDVTVSF
                     ETQQDIQLMRFADYFGRAFSSVSASQFPWVKLLRESAVAKVADNPVSHIPETVYKTSV
                     DWISNRSLEALGSFVLWSMDNILADFASQQGGAKGSKKGAQKPSSKSQVGIFVALAMV
                     LRRKPDAFISVLSTLRDTSKYQGQDKLPVIVWMVAQASHGDLAVGLYAWSHLVLPIVG
                     GKSGSNPQTRDLILQLVERILSAPKARTILVNGAVRKGERLIPPSALDLLLRVTFPSS
                     SARVKATERFEAVYPTLKDVALAGSHGSKAMKQVSQQILTVSLKASGEGIPELSREAS
                     GIFIWCLTQNPECYRQWVKVYEDNLEASVAILKRLTEQWKELSLNQSSLETLSETLRT
                     FKNKNEKALTSGEISADQESLYKEADKHCKVLLGRQTHGLGCVKVLGIALIIIGVGIT
                     LAPPTALDDIDLTKLIEMFNN"
     misc_feature    506..>1774
                     /gene="LOC139839989"
                     /note="C-terminal, caspase 4 activator; Region: TMEM214;
                     pfam10151"
                     /db_xref="CDD:462966"
     polyA_site      2136
                     /gene="LOC139839989"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaactcaaa tcccatttcg catctccatc gtttttcccg tctaaattcc cgatctcaaa
       61 ctccatcttt ctcacagttt tcaaaatcca aatggaattt gaatcaatca acgaagatat
      121 catcaacaac aacaatcacg gatggcaaaa agtcacttac gctaaaaaac atcgcaaagt
      181 tccggcgaaa caacaaccgg cgcaaccggt gaagtcatta gctaacggat cttcaatttc
      241 aacagatgat aatgttttta aatcaatcga aaagaaatct gaagaacgta ggaagctaat
      301 tgaagctgaa cgattagcga attcagctat ttatgatcct gttcctgtta aatcatctaa
      361 aaagaagaag aataattact ctgattatga tgatagtgat gataatgatg atgaggtcgt
      421 tgttaatggt tcggttggaa acggcgtcgt tgaagagaag aaaacgaagg ctaagaaggt
      481 gaaaaaacct aaagtttcgg ttactgaagc tgcggcgaag atcgatgctg atgatttagc
      541 tagttttcta tccgatgtga ctgtttcatt tgagacgcaa caggatatac agttgatgag
      601 gtttgcggat tactttggac gagcattttc gagtgtcagt gcttcacagt ttccttgggt
      661 gaagttattg agagaatctg ctgttgcaaa ggttgcagat aacccagtgt cacatatccc
      721 cgaaactgtt tacaagacat cagttgactg gatcagtaac cgatctttgg aagcccttgg
      781 atcttttgtc ctatggtcca tggataacat ccttgctgac tttgcaagcc aacaaggtgg
      841 tgcaaaggga tccaagaaag gtgcccaaaa accatcttca aaatctcagg ttggtatttt
      901 cgttgcatta gcaatggtat tgcgaaggaa acctgatgca ttcatcagtg tgttgtcaac
      961 tctgagggac acttcaaagt atcaggggca agataaactt ccagtcattg tgtggatggt
     1021 agcacaggca tcacatgggg atcttgctgt tggtttgtac gcttggtctc atttagtatt
     1081 acccatagtt gggggcaaat cgggctctaa ccctcagacc agagacctaa ttctgcaatt
     1141 agttgaaaga attttgtctg ctcccaaggc tcgcactatt ttagtaaacg gggctgtgcg
     1201 aaagggagag cgtttgatac ctccatcagc acttgacctt cttttacgag tcaccttccc
     1261 ttcatcttca gctcgagtta aggcaacaga aaggtttgaa gctgtatatc ctacactcaa
     1321 ggatgtggct cttgccggtt ctcatggaag caaagcaatg aaacaagttt ctcaacaaat
     1381 cttgaccgtt tctttgaaag cttctggaga aggaattcct gagctatccc gtgaagcatc
     1441 tggtattttt atctggtgct taactcaaaa tcccgaatgt tataggcaat gggtgaaggt
     1501 gtatgaggat aatttagaag caagcgttgc gattctgaaa aggcttactg aacagtggaa
     1561 ggaactatct ttaaaccagt cttctcttga aactctcagt gaaactctca ggactttcaa
     1621 gaacaagaat gagaaggcat tgacatcggg ggaaatatct gccgatcaag aatcactcta
     1681 caaagaagca gacaaacact gtaaggtgtt actaggaaga caaacacacg ggttgggatg
     1741 tgtcaaagtt ttgggcatag ctttgattat cattggtgtc ggaatcactc tcgctcctcc
     1801 aactgccttg gacgatatag atttaactaa attaatcgaa atgttcaaca actagcgctc
     1861 ctcataaaaa tacagccgtt tgagtcctac atgcagcagc tacttgaccg gcacacacac
     1921 agaggagtca aagtaaacaa aaaaagataa tgagataatt tagtataagt ttcccctctt
     1981 ataaaacggt gctcaactaa aaatagttgc agatgtaatc ggtgtgatag attttgtttc
     2041 ttgtttattt cggatatttt ttgtttcttt tgcgttgagg tggatgttaa ctttaaaagg
     2101 tttatctttc atatacagta tcaaatagtt cagcta
//
LOCUS       XM_071830211             727 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAD(P)H-quinone
            oxidoreductase subunit L, chloroplastic (LOC139839990), mRNA.
ACCESSION   XM_071830211
VERSION     XM_071830211.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..727
                     /gene="LOC139839990"
                     /note="NAD(P)H-quinone oxidoreductase subunit L,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139839990"
     CDS             32..607
                     /gene="LOC139839990"
                     /codon_start=1
                     /product="NAD(P)H-quinone oxidoreductase subunit L,
                     chloroplastic"
                     /protein_id="XP_071686312.1"
                     /db_xref="GeneID:139839990"
                     /translation="MSPSMGFNILKALPSLPHCKFHPLSTPFNQKHSYISKPNKSSKL
                     VVVNCKKSDNEITLNKSSLAIQVGALLSTLVSEPALAVTGVNNEEDFVWQLIQLAICA
                     FFYFLVAPPFIMNWLRIRWYKRNLLEMYVQFMFVFMFFPGVLLWAPFLNIRKFPRDPN
                     MKYPWSVPEDPSKIRNSYRKFPWATIDDYEV"
     misc_feature    278..505
                     /gene="LOC139839990"
                     /note="NADH dehydrogenase transmembrane subunit; Region:
                     NdhL; pfam10716"
                     /db_xref="CDD:402381"
     polyA_site      727
                     /gene="LOC139839990"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaacacaca cacatatggt cacaaaacaa aatgagcccc tccatgggct tcaatatcct
       61 aaaggctttg ccttctcttc cccattgcaa atttcaccct ctctctactc cattcaatca
      121 aaaacattcc tacatatcca agcctaacaa gtcttcaaaa ctcgtagttg tcaattgtaa
      181 gaagagcgac aatgagatca ctttgaacaa gtctagtttg gcaatacaag tgggggcact
      241 tttgagtacg cttgttagtg aaccagcttt ggctgtgacc ggtgtaaaca atgaagagga
      301 ttttgtgtgg caattgatac aattagccat atgcgccttc ttctatttcc tagtggcacc
      361 accttttatc atgaactggt tgaggataag atggtacaag agaaatctat tagagatgta
      421 tgtgcagttt atgtttgtct tcatgttctt cccaggtgta ttgctttggg ctccattttt
      481 gaacatcaga aagttcccaa gagatccaaa catgaagtac ccttggtctg tccctgaaga
      541 cccatccaag atccgcaatt cgtacaggaa attcccatgg gctactatcg atgattatga
      601 agtttaaaaa cttccgtttg tattataata attacaagta catcattatc tttttatcct
      661 gtataaatgt ttcatgatac taagcatata cgagtaaaac taatggaaat tcaagatagc
      721 tgaacta
//
LOCUS       XM_071830212            2265 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DELLA protein GAI1-like
            (LOC139839991), mRNA.
ACCESSION   XM_071830212
VERSION     XM_071830212.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2265
                     /gene="LOC139839991"
                     /note="DELLA protein GAI1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 41
                     Proteins"
                     /db_xref="GeneID:139839991"
     CDS             281..1924
                     /gene="LOC139839991"
                     /codon_start=1
                     /product="DELLA protein GAI1-like"
                     /protein_id="XP_071686313.1"
                     /db_xref="GeneID:139839991"
                     /translation="MKRDYLPSQDYPYFDNASSGGGSTSAATTGKSKMWDELDQQDAG
                     VDELLAVLGYQVKPSDMADVAQKIEHLEGVLENDDGLSQLASDSVHYNPSDLSTWLES
                     MICELNPSIEQTPVVDSSNSSIVINDDLQSIPGNAIYPPPTKKQKPISSPSTTSYNPN
                     PIVLVDSQENGIRLVHTLMACAEAVQQGDLKLAETLVKQAGILAVSQAGAMRKVATYF
                     AEALARRIYGLYPKPQHDSPAFQDLLQMHFYETCPYLKFAHFTANQAILEAFAGCQKV
                     HVIDFSLKQGMQWPALMQALALRPGGPPSFRLTGIGPPSGDDTDHLQEVGWKLAQLAE
                     TIHVKFEFRGFLAESLADIEPGMLDLREGEVVAVNTVFELHQLLARPGAVEKILGSIK
                     EMKPVILTVVEQEANHNGPVFLERFTESLHYYSTLFDSLESSGLSEPVEGGCLTAASN
                     QDKIMSEVYLGKQICNVVACEGTDRVERHQTLSQWKTRFESSGFEPVHLGSNAYKQAS
                     MLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLR"
     misc_feature    416..610
                     /gene="LOC139839991"
                     /note="Transcriptional regulator DELLA protein N terminal;
                     Region: DELLA; pfam12041"
                     /db_xref="CDD:403308"
     misc_feature    800..1915
                     /gene="LOC139839991"
                     /note="GRAS domain family; Region: GRAS; pfam03514"
                     /db_xref="CDD:397536"
     polyA_site      2265
                     /gene="LOC139839991"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtggtgata ttgtgttgtg ttgtccgcct gtggagttat cgaggattgc gctaccattt
       61 ctctcaattt ctcccatctc cacgcaccac cactttcatt cgctgttcca ttttcatacc
      121 tccacctatc aattatccat taccccactt cctccaatac ccctccaatc actactctat
      181 ttctcctcct cccatttcca agatctaccc caaattataa cccaacccaa cccaacaaca
      241 aattcatttc atttcctaaa aaaaaaaaaa aacaattaaa atgaaacgag attacctacc
      301 atcacaagat tacccctact ttgacaacgc tagtagcggc ggcggctcta cttccgccgc
      361 cactaccggt aaatcaaaga tgtgggacga acttgaccaa caagacgccg gcgttgacga
      421 gctgttagct gttttaggtt atcaagttaa accatccgat atggctgatg tcgcgcaaaa
      481 gatcgaacac ttggagggcg ttttagaaaa cgacgacggt ttgtctcagc tagcttcaga
      541 ttccgttcac tataaccctt ctgatctatc tacatggctt gaatccatga tttgtgaact
      601 taacccttca atcgaacaaa ccccagtcgt cgattcatcc aactcatcaa tcgttattaa
      661 cgacgatcta caatcgattc caggtaacgc aatttaccca ccaccaacta aaaaacaaaa
      721 accaatctct tccccctcaa caacctcgta caatccgaac ccaattgttc ttgtcgattc
      781 acaagaaaac ggaatccgtt tggttcacac tttgatggcg tgtgctgaag ccgtacaaca
      841 aggcgatttg aaattagctg aaaccctagt gaaacaagcc ggaatattag ccgtatctca
      901 agccggcgcg atgaggaaag tggctacgta tttcgccgaa gctttagcgc gccgtatata
      961 cggactttat ccgaaaccac aacacgattc accggcgttt caagatttac ttcagatgca
     1021 tttttacgaa acgtgtccgt acttaaagtt tgctcatttt actgcaaatc aagcgatact
     1081 tgaagcattt gctgggtgtc agaaagtgca cgtgattgat tttagtttga agcaaggtat
     1141 gcagtggccg gctttgatgc aggctttagc acttagaccg ggcggtccac cgagttttag
     1201 attgaccggg attggaccgc cgtcaggtga tgatacggat catttgcaag aggttggttg
     1261 gaagttggca caattagcag aaacgattca tgttaaattt gaatttcgtg ggtttttagc
     1321 tgagagttta gcggatattg aaccggggat gttggattta agggaaggtg aagttgtggc
     1381 tgttaatacg gtttttgagt tgcatcagtt gttggctaga ccgggggcgg tcgagaagat
     1441 attgggatcg attaaagaaa tgaaaccagt gattttgaca gtggttgagc aggaagcgaa
     1501 tcataacggg ccggtttttt tggaacggtt tactgagagt ttgcattatt attcgacgct
     1561 ttttgactcg cttgagagta gcggtttaag tgaaccggtg gaaggtggtt gtctgacggc
     1621 ggcgagtaat caagataaga ttatgtcgga agtttatttg ggaaaacaga tctgtaacgt
     1681 agtggcgtgt gaaggaacgg accgggttga acgtcatcaa acgttgagtc aatggaaaac
     1741 ccggtttgaa tcgagtgggt ttgaaccggt tcatttgggt tcaaatgctt ataagcaagc
     1801 cagtatgtta ttggctttat ttgctggtgg cgatgggtat agagtggagg aaaacaacgg
     1861 ttgtttgatg ttgggttggc atacccggcc gttgattgcc acgtcagcgt ggaaactccg
     1921 atgaatcgaa ctcaactcgg tcaatgaaag tcaaaggaat cggggatgat gggatcggga
     1981 tcaggatcag gatcaggatc aactcagtgc cagctaggga tggaaaggaa aatgaaattg
     2041 catgttgctg tagttgggaa actatgactg attaggtggg ggccacttgc tgccaacctt
     2101 ttttttataa atttttttgt ttttctattt taaagtactc caatttttta tgttttgttt
     2161 tttttttttt ttctttttaa ttgttgatga tggtgaaaat tgaaagtaga ttaaaagctt
     2221 atgtaagata aatggaatga aatctttgta atttgtttga ttgca
//
LOCUS       XM_071830213            1461 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-glucose 6-dehydrogenase
            5-like (LOC139839992), mRNA.
ACCESSION   XM_071830213
VERSION     XM_071830213.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1461
                     /gene="LOC139839992"
                     /note="UDP-glucose 6-dehydrogenase 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 54 Proteins"
                     /db_xref="GeneID:139839992"
     CDS             8..1417
                     /gene="LOC139839992"
                     /codon_start=1
                     /product="UDP-glucose 6-dehydrogenase 5-like"
                     /protein_id="XP_071686314.1"
                     /db_xref="GeneID:139839992"
                     /translation="MVKICCIGAGYVGGPTMAVIALKCPDIEVAVVDISVPRIAAWNS
                     DQLPIYEPGLDDVVKSCRGKNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAAD
                     LTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGVNYQILSNPEFLA
                     EGTAIEDLFAPDRVLIGGRETPEGQKAIRALKAVYAHWVPEERILCTNLWSAELSEER
                     ILYMSALCEATGADVAEVSHAVGKDTRIGHKFLNASVGFGGSCFQKDILNLVYICECN
                     GLSEVANYWKQVIKVNDYQKNRFVNRIVSSMFNTVSGKKIAVLGFAFKKDTGDTRETP
                     AIDVCKGLLGDNAQLSIYDPQVTEEQIQRDLSMKKFDWDHPTHLQPMSPSCVKQVSVV
                     WDAYEAAKGAHGLCILTEWDEFKNLDFKKIYDNMPKPAFVFDGRNVVDPHKLREIGFI
                     VYSIGKPLDSWLKDMPAVA"
     misc_feature    8..1393
                     /gene="LOC139839992"
                     /note="probable UDP-glucose 6-dehydrogenase; Region:
                     PLN02353"
                     /db_xref="CDD:177986"
ORIGIN      
        1 gttcaaaatg gtgaagattt gttgcattgg agctggttat gttggtggtc caacaatggc
       61 agttattgcc ctcaagtgtc ctgatattga ggtagccgtg gttgatatct cggtccctcg
      121 aattgcagcc tggaacagtg accagctccc aatttacgag ccagggctcg atgatgttgt
      181 gaagtcatgt agaggcaaga atctgttctt tagcactgat gttgagaagc atgttgctga
      241 ggctgacatc atctttgttt cggttaatac accaactaag actcgaggtc ttggtgctgg
      301 gaaagccgcc gatctcacat actgggaaag tgcagctcgt atgattgctg acgtgtcaaa
      361 atccgacaag attgttgttg aaaagtcaac tgtcccagtc aaaacagctg aggctattga
      421 aaagatcttg actcataaca gcaaaggtgt gaactaccaa attttgtcga accccgagtt
      481 tcttgctgaa ggaactgcga tagaagacct ttttgcccct gatcgtgttt taatcggagg
      541 tcgagaaacc ccagaaggtc aaaaggcgat acgggcgtta aaagctgttt acgcgcattg
      601 ggtgcccgag gagaggatcc tatgcactaa tctttggtca gctgagttgt ccgaggagag
      661 gatcctctac atgtcagcgt tgtgtgaagc cactggcgct gacgtggcag aggtgtccca
      721 cgcagtgggt aaagacacta gaatcggaca caagttttta aacgcgagtg ttggattcgg
      781 tggatcttgt ttccaaaagg atattctcaa tttggtttac atttgtgaat gcaatggttt
      841 atctgaagtg gctaattatt ggaaacaagt gattaaggtc aacgattatc aaaagaatcg
      901 ttttgtcaac aggatcgttt cgtcaatgtt taatactgtt tcggggaaaa agattgcggt
      961 tttgggattc gcttttaaaa aagatacggg tgacactagg gaaacaccgg cgatcgatgt
     1021 atgcaaaggt ttgttaggag ataatgctca attgagtatt tatgatccac aagtgactga
     1081 agaacagatt cagagggatc tttcgatgaa gaagtttgac tgggaccacc cgacgcacct
     1141 gcagcccatg agcccgagct gtgtgaagca agtgagtgtg gtctgggatg cgtatgaggc
     1201 ggctaagggt gcacatgggc tatgtatctt gaccgagtgg gatgagttca agaatcttga
     1261 tttcaagaag atttatgata acatgccgaa gccggcgttt gtgtttgatg gaagaaatgt
     1321 ggtggaccca cataagttga gggagattgg gttcattgtg tactcaattg ggaagccatt
     1381 ggactcatgg ttgaaggata tgcctgctgt ggcataaaaa ctctgttttg tttatgatca
     1441 tttcatatga ggattcaaac t
//
LOCUS       XM_071830214             842 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-processing
            enzyme-like (LOC139839994), mRNA.
ACCESSION   XM_071830214
VERSION     XM_071830214.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-139               JBITNF010000004.1  64436177-64436315
            140-296             JBITNF010000004.1  64436423-64436579
            297-382             JBITNF010000004.1  64436670-64436755
            383-427             JBITNF010000004.1  64436848-64436892
            428-428             "N"                1-1
            429-842             JBITNF010000004.1  64436893-64437306
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..842
                     /gene="LOC139839994"
                     /note="vacuolar-processing enzyme-like; The sequence of
                     the model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     inserted 1 base in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139839994"
     CDS             17..568
                     /gene="LOC139839994"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: vacuolar-processing
                     enzyme-like"
                     /protein_id="XP_071686315.1"
                     /db_xref="GeneID:139839994"
                     /translation="MYDENIIVFMYDDIANNTKNPRPGVIINSPDGSDVYEGVPKDYT
                     GDDVTADNFYALLLGNASGVTCGSGKVLSSEPQDTIFVYYSDHGGHGVLEMPTSAHVY
                     ATDFINALKVKHAMGTYDEMVIYIEACQSGSIFEGXYVTTASNANESSWATYCPNMDP
                     PSPPGFDTCLGDLYSVSWLEDRY"
     misc_feature    20..559
                     /gene="LOC139839994"
                     /note="Peptidase C13 family; Region: Peptidase_C13;
                     pfam01650"
                     /db_xref="CDD:396290"
ORIGIN      
        1 tcttttaatc gtgttcatgt acgatgagaa cataatcgtg ttcatgtacg atgacattgc
       61 taataacaca aagaatccaa ggcctggtgt cattattaac agtccggatg gctccgatgt
      121 ttacgagggt gtaccaaagg attacactgg agatgatgtg acagcagaca atttctacgc
      181 tttgcttctt ggaaacgcct caggggtgac atgtggaagc gggaaagttt tatcgagcga
      241 acctcaagat acaatctttg tgtattacag cgatcatggt ggccatggag tccttgagat
      301 gccgacctca gctcacgttt atgctactga tttcatcaat gctttgaagg taaagcatgc
      361 aatgggtact tacgatgaga tggttatata tatagaagca tgtcaaagtg gaagtatttt
      421 tgagggtnct tatgtgacaa ctgcatcaaa cgcaaacgag agtagttggg ccacatattg
      481 tccgaatatg gaccctccct caccccctgg ttttgacact tgcttaggtg acttgtacag
      541 tgtttcttgg ttggaagaca ggtattaatt tctgatctta ctaagaaatt taatcgtttg
      601 aaggttgatg ttgtggttgt taagccgatc ataaagactc gaaaaggtaa aggtaaaacg
      661 gatgtcgggt agttttacca gtggttttgg ttcatttata tgttagtaga ttttggttag
      721 atttggatat tttattggtt gtgcttttgt ttgtgtcccg tgagcgtttt agtgttacgg
      781 ttgttcagct cgggcttagt tagtttagac tctttgttta gttttaggga agcctcgact
      841 tg
//
LOCUS       XR_011757169            1447 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839995), ncRNA.
ACCESSION   XR_011757169
VERSION     XR_011757169.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1447
                     /gene="LOC139839995"
                     /note="uncharacterized LOC139839995; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839995"
     ncRNA           1..1447
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839995"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839995"
ORIGIN      
        1 tgtgctattg tatacatccc aaataacatc gcataaagat atcgtatata gcagaactat
       61 attagggact gcgtgtatct ctctctatcg aaccctaacc ctaaattcaa cagttatttt
      121 ccctaatcat acaccaaaat tactcgaatc aaccaagatt aaacgtgatt tacatattag
      181 tttagttcac caattgcatg atttcaccaa ttgccttcat attacacttc caccagcgta
      241 gctaaacatt gaactaccgg cgatcctatt gtcgttgctc actaacatca aatttgcacc
      301 gatctcgaaa actgccgcag gttgtcagag gagatttcat tcctgataat tatgctttgt
      361 gtaagctttc aactgactcg gcaccaatgt acatagtgca atactctttt tgttagactt
      421 gtgaaggcga atgactatag tttatatgtt atatgtgcta actaatcaag tttctagaaa
      481 taatggatta agaatatgtt gttcttgttg gaaacaggac tccgtgaccg agtgatcaat
      541 tcaagtgatt atctctcttc aaggttcaat ggcagtatct aacatgtttt tagtctcagg
      601 tttagattgg aaagtactaa gatgcggcga tttcaggttt atttatatat gttaagcttt
      661 cttgaacttc aagtgacatt attcaagctg aagattgtgc ttacagaatt ggccagggat
      721 gttgtttaaa gaaagttaga aaatttggtg caatgaaaga tctatttttg aggaattgct
      781 caagggcgtt caatgatcaa gtaaacatta aattatcatg ttagtatatt ttgtcttcat
      841 ggaacacttt gatcaaagat cgagatcagt catctatgct ctttcctgtc ctactagtat
      901 ttgcacacac tagcttgctt aatattagca tctttttgca atatttttat tgctttcata
      961 ctgcagtttc catttcatat atttatattt tatatcaata tcgttagaag aaaaagagtg
     1021 gacttgaaaa ggtatggctt gttctgtatc atagtgttta ctcattttct ttttggtgct
     1081 attattctaa gttattatct tgtttttatt caggtcatta tgttcttgtc aaagtatgat
     1141 aaagagacaa agccaacaga aagcttgcta aagagacaga tgggtatgta tggaaatttc
     1201 tcgttaagtt ccattgttag tagtctgcaa ctttttgaat aaattgtggt ctatgaataa
     1261 cggctctaat ctaagcctac attatggtgt actctatatt cttttatatt attaaatagt
     1321 tgtcctatca ccattttaaa aacaccaggt caatgttatg tggatttttg tatatatagt
     1381 tactttattg ttgcttctgt aagtattcta gcaattataa gtgatatgat tagtgagtag
     1441 tggagct
//
LOCUS       XR_011757170             581 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839996), ncRNA.
ACCESSION   XR_011757170
VERSION     XR_011757170.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..581
                     /gene="LOC139839996"
                     /note="uncharacterized LOC139839996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839996"
     ncRNA           1..581
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839996"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139839996"
ORIGIN      
        1 agtagctgga aacagggggt tgcgcgccgc gcaaagggag ggcgcgccgc gcaaaacgct
       61 ggtgacagct ctccttgttt tatttaattt aaacgatggg catttcggta aattcacttc
      121 aaggccggat ttaatgcttg gatcagtagt ttgggagttc aattactccc ttgttcacca
      181 accttatcct cccaattcat tttagtgaga gagagtggga tattagagag agagatccca
      241 ttttgaagaa gaagaaggag gtttcttgct aaagttcaag ttctaaagtt gttcatctac
      301 ttcctagcta cattttgatt gtggtggtac gattgctttg aagatcggaa gtgcataatc
      361 atcatcttgg cgctaaggtt cgtgtgtgga taagggtaag ggcattacct tggattaagt
      421 ttcccgcttt gatgattagg aagcgctttt ggctttggct tggagtttga ccgagacttg
      481 ggtagtttaa ccccaaacac catgctcgtt gtgtcgtttg gcaattaaac tttttgtggt
      541 cgaaactcta atttgtatta aatttgtatt tttacactta g
//
LOCUS       XM_071830215            1849 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides C2 domain-containing protein
            At1g53590-like (LOC139839997), transcript variant X1, mRNA.
ACCESSION   XM_071830215
VERSION     XM_071830215.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1849
                     /gene="LOC139839997"
                     /note="C2 domain-containing protein At1g53590-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839997"
     CDS             421..666
                     /gene="LOC139839997"
                     /codon_start=1
                     /product="C2 domain-containing protein At1g53590-like"
                     /protein_id="XP_071686316.1"
                     /db_xref="GeneID:139839997"
                     /translation="MLNESFWWGIKFLPRWPFLGLLRVCFVKPPYFRMTIKSILTHAL
                     DVAEVPEIVGLLDKLLQVAFEETLVEGFIFYFFDEEM"
     misc_feature    <445..630
                     /gene="LOC139839997"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain superfamily; Region: SMP_SF; cl45903"
                     /db_xref="CDD:459248"
ORIGIN      
        1 tttttttttt cttccaaaaa ccattccgga taccaaatcg tcaaatacta taatcaacca
       61 tctttgaatc ccttgatgaa tgcatgaata ccgaaattat cggtttacga atctaatttc
      121 gattcggatg agggaaaaca gacaatctaa tttgaaaccc ttgctctaat ttcgataatc
      181 aaatcgatca aagttgttta atactattat tgttcagaag atgattatcc actccaaacg
      241 aattcataac cttaattaga gaaatcaagg cttttaattg attttgcaaa gagagttttg
      301 taagaggttc atcataattc tcaacaagat tcaggaggaa agtgaggttc gaaaaaagaa
      361 ggcaaggtga ataattggat ttgtaactac tgtataaaag tgaactccac aacaaaatgc
      421 atgctgaatg aaagcttttg gtgggggatt aagtttcttc cgagatggcc gtttcttgga
      481 cttctaaggg tgtgttttgt caaaccacct tactttcgga tgacaataaa atcaatcctt
      541 actcatgctc ttgatgttgc tgaagttcct gagattgttg gactactgga taagcttctg
      601 caagttgctt tcgaggagac actggttgag ggattcattt tttatttctt tgatgaagaa
      661 atgtaagctc tcaaattaca aaggtaaaac tatgattttc tattttctgc aactaaaatc
      721 acattttcta tatttatttt tcatgcttac atggaatcag attttgaaat ggttgagttt
      781 gctgtaagga caattttgga ctgcaaaacc ttggcctttt aacgacgatg cagatgagtt
      841 ttcggagtat atttggtttt taaactaata tatcattgtg taatttcgca gaaagtgtat
      901 gttgggttgg attttcaaac ttctatgttg atatatttaa gttcgttacc gtctattatg
      961 tagctttgaa catgttgaat tatcaggttg gtcctgttgt taaggtttgt gttaaggtct
     1021 tggttatatg ggttcaaaac tatttcaata atccaaccca agtttcctgc attgagatga
     1081 tattgataga tgaggaggtt tgtctcacta ttctacaacc ccctattatt ttatcttttt
     1141 attttttcga ttaattactt cttacagtat atctattaac tatgtgtaga taaataagaa
     1201 acttgagtga cttgacaagt ttgtaatagg gtattaaata accaaaacta tgggttgaca
     1261 tagtaataat aaaggtctcg tgagggttgg tgtatatgca taaccagaac taagggccac
     1321 taagaactgt acatctaaat gagaagaaaa tcgggagcag tttgaatgat aagatatcca
     1381 agttcaggta ataggtatgt ttaattatct tttttgtttt gtgttttatg tctatataga
     1441 tcagatattt ttgcaaatct tttatgtatg cggtatgcca tacggtaaaa cacattcgat
     1501 cataaaaatc gctaacatca tgtttgaatt tggtaaatag agagtcctat tagtttggcc
     1561 aatacaaaat attatacagg gtttgggagg actttttgga atgcaacgtg gttcttctaa
     1621 cagaaacttt gttagtcatc tttcgaaatg attcaataga ttgcctttat tttatgtatt
     1681 catcttttgg atataatgag atttatatgt taagagatca tagttgtgtg gtatggtaat
     1741 atcgagggaa gaacctcata ggggcagtga ggtcaatccc tccttttgta tatgttagtt
     1801 tttttaaaag gcggtatttt ttcattgtat atttatataa tttataaaa
//
LOCUS       XM_071830218            1772 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides C2 domain-containing protein
            At1g53590-like (LOC139839997), transcript variant X2, mRNA.
ACCESSION   XM_071830218
VERSION     XM_071830218.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1772
                     /gene="LOC139839997"
                     /note="C2 domain-containing protein At1g53590-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839997"
     CDS             421..666
                     /gene="LOC139839997"
                     /codon_start=1
                     /product="C2 domain-containing protein At1g53590-like"
                     /protein_id="XP_071686319.1"
                     /db_xref="GeneID:139839997"
                     /translation="MLNESFWWGIKFLPRWPFLGLLRVCFVKPPYFRMTIKSILTHAL
                     DVAEVPEIVGLLDKLLQVAFEETLVEGFIFYFFDEEM"
     misc_feature    <445..630
                     /gene="LOC139839997"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain superfamily; Region: SMP_SF; cl45903"
                     /db_xref="CDD:459248"
ORIGIN      
        1 tttttttttt cttccaaaaa ccattccgga taccaaatcg tcaaatacta taatcaacca
       61 tctttgaatc ccttgatgaa tgcatgaata ccgaaattat cggtttacga atctaatttc
      121 gattcggatg agggaaaaca gacaatctaa tttgaaaccc ttgctctaat ttcgataatc
      181 aaatcgatca aagttgttta atactattat tgttcagaag atgattatcc actccaaacg
      241 aattcataac cttaattaga gaaatcaagg cttttaattg attttgcaaa gagagttttg
      301 taagaggttc atcataattc tcaacaagat tcaggaggaa agtgaggttc gaaaaaagaa
      361 ggcaaggtga ataattggat ttgtaactac tgtataaaag tgaactccac aacaaaatgc
      421 atgctgaatg aaagcttttg gtgggggatt aagtttcttc cgagatggcc gtttcttgga
      481 cttctaaggg tgtgttttgt caaaccacct tactttcgga tgacaataaa atcaatcctt
      541 actcatgctc ttgatgttgc tgaagttcct gagattgttg gactactgga taagcttctg
      601 caagttgctt tcgaggagac actggttgag ggattcattt tttatttctt tgatgaagaa
      661 atgtaagctc tcaaattaca aagattttga aatggttgag tttgctgtaa ggacaatttt
      721 ggactgcaaa accttggcct tttaacgacg atgcagatga gttttcggag tatatttggt
      781 ttttaaacta atatatcatt gtgtaatttc gcagaaagtg tatgttgggt tggattttca
      841 aacttctatg ttgatatatt taagttcgtt accgtctatt atgtagcttt gaacatgttg
      901 aattatcagg ttggtcctgt tgttaaggtt tgtgttaagg tcttggttat atgggttcaa
      961 aactatttca ataatccaac ccaagtttcc tgcattgaga tgatattgat agatgaggag
     1021 gtttgtctca ctattctaca accccctatt attttatctt tttatttttt cgattaatta
     1081 cttcttacag tatatctatt aactatgtgt agataaataa gaaacttgag tgacttgaca
     1141 agtttgtaat agggtattaa ataaccaaaa ctatgggttg acatagtaat aataaaggtc
     1201 tcgtgagggt tggtgtatat gcataaccag aactaagggc cactaagaac tgtacatcta
     1261 aatgagaaga aaatcgggag cagtttgaat gataagatat ccaagttcag gtaataggta
     1321 tgtttaatta tcttttttgt tttgtgtttt atgtctatat agatcagata tttttgcaaa
     1381 tcttttatgt atgcggtatg ccatacggta aaacacattc gatcataaaa atcgctaaca
     1441 tcatgtttga atttggtaaa tagagagtcc tattagtttg gccaatacaa aatattatac
     1501 agggtttggg aggacttttt ggaatgcaac gtggttcttc taacagaaac tttgttagtc
     1561 atctttcgaa atgattcaat agattgcctt tattttatgt attcatcttt tggatataat
     1621 gagatttata tgttaagaga tcatagttgt gtggtatggt aatatcgagg gaagaacctc
     1681 ataggggcag tgaggtcaat ccctcctttt gtatatgtta gtttttttaa aaggcggtat
     1741 tttttcattg tatatttata taatttataa aa
//
LOCUS       XR_011757171            1959 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides C2 domain-containing protein
            At1g53590-like (LOC139839997), transcript variant X3, misc_RNA.
ACCESSION   XR_011757171
VERSION     XR_011757171.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1959
                     /gene="LOC139839997"
                     /note="C2 domain-containing protein At1g53590-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839997"
     misc_RNA        1..1959
                     /gene="LOC139839997"
                     /product="C2 domain-containing protein At1g53590-like,
                     transcript variant X3"
                     /db_xref="GeneID:139839997"
ORIGIN      
        1 tttttttttt cttccaaaaa ccattccgga taccaaatcg tcaaatacta taatcaacca
       61 tctttgaatc ccttgatgaa tgcatgaata ccgaaattat cggtttacga atctaatttc
      121 gattcggatg agggaaaaca gacaatctaa tttgaaaccc ttgctctaat ttcgataatc
      181 aaatcgatca aagttgttta atactattat tgttcagaag atgattatcc actccaaacg
      241 aattcataac cttaattaga gaaatcaagg cttttaattg attttgcaaa gagagttttg
      301 taagaggttc atcataattc tcaacaagat tcaggaggaa agtgaggttc gaaaaaagaa
      361 ggcaaggtga ataattggat ttgtaactac tgtataaaag tgaactccac aacaaaatgc
      421 atgctgaatg aaagcttttg gtgggggatt aagtttcttc cgagatggcc gtttcttgga
      481 cttctaaggg tgtgttttgt caaaccacct tactttcgga tgacaataaa atcaatcctt
      541 actcatgctc ttgatgttgc tgaagttcct gagattgttg gactactgta gtttattagg
      601 ataagcttct gcaagttgct ttcgaggaga cactggttga ggtaacgttt ttttgcgtaa
      661 aaaaatattc agttatagga tgtgtactgg attacatagt tggtactgat tagatgatct
      721 attgtaaaat atattgtcag ggattcattt tttatttctt tgatgaagaa atgtaagctc
      781 tcaaattaca aaggtaaaac tatgattttc tattttctgc aactaaaatc acattttcta
      841 tatttatttt tcatgcttac atggaatcag attttgaaat ggttgagttt gctgtaagga
      901 caattttgga ctgcaaaacc ttggcctttt aacgacgatg cagatgagtt ttcggagtat
      961 atttggtttt taaactaata tatcattgtg taatttcgca gaaagtgtat gttgggttgg
     1021 attttcaaac ttctatgttg atatatttaa gttcgttacc gtctattatg tagctttgaa
     1081 catgttgaat tatcaggttg gtcctgttgt taaggtttgt gttaaggtct tggttatatg
     1141 ggttcaaaac tatttcaata atccaaccca agtttcctgc attgagatga tattgataga
     1201 tgaggaggtt tgtctcacta ttctacaacc ccctattatt ttatcttttt attttttcga
     1261 ttaattactt cttacagtat atctattaac tatgtgtaga taaataagaa acttgagtga
     1321 cttgacaagt ttgtaatagg gtattaaata accaaaacta tgggttgaca tagtaataat
     1381 aaaggtctcg tgagggttgg tgtatatgca taaccagaac taagggccac taagaactgt
     1441 acatctaaat gagaagaaaa tcgggagcag tttgaatgat aagatatcca agttcaggta
     1501 ataggtatgt ttaattatct tttttgtttt gtgttttatg tctatataga tcagatattt
     1561 ttgcaaatct tttatgtatg cggtatgcca tacggtaaaa cacattcgat cataaaaatc
     1621 gctaacatca tgtttgaatt tggtaaatag agagtcctat tagtttggcc aatacaaaat
     1681 attatacagg gtttgggagg actttttgga atgcaacgtg gttcttctaa cagaaacttt
     1741 gttagtcatc tttcgaaatg attcaataga ttgcctttat tttatgtatt catcttttgg
     1801 atataatgag atttatatgt taagagatca tagttgtgtg gtatggtaat atcgagggaa
     1861 gaacctcata ggggcagtga ggtcaatccc tccttttgta tatgttagtt tttttaaaag
     1921 gcggtatttt ttcattgtat atttatataa tttataaaa
//
LOCUS       XR_011757172            1783 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides C2 domain-containing protein
            At1g53590-like (LOC139839997), transcript variant X4, misc_RNA.
ACCESSION   XR_011757172
VERSION     XR_011757172.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1783
                     /gene="LOC139839997"
                     /note="C2 domain-containing protein At1g53590-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839997"
     misc_RNA        1..1783
                     /gene="LOC139839997"
                     /product="C2 domain-containing protein At1g53590-like,
                     transcript variant X4"
                     /db_xref="GeneID:139839997"
ORIGIN      
        1 tttttttttt cttccaaaaa ccattccgga taccaaatcg tcaaatacta taatcaacca
       61 tctttgaatc ccttgatgaa tgcatgaata ccgaaattat cggtttacga atctaatttc
      121 gattcggatg agggaaaaca gacaatctaa tttgaaaccc ttgctctaat ttcgataatc
      181 aaatcgatca aagttgttta atactattat tgttcagaag atgattatcc actccaaacg
      241 aattcataac cttaattaga gaaatcaagg cttttaattg attttgcaaa gagagttttg
      301 taagaggttc atcataattc tcaacaagat tcaggaggaa agtgaggttc gaaaaaagaa
      361 ggcaaggtga ataattggat ttgtaactac tgtataaaag tgaactccac aacaaaatgc
      421 atgctgaatg aaagcttttg gtgggggatt aagtttcttc cgagatggcc gtttcttgga
      481 cttctaaggg tgtgttttgt caaaccacct tactttcgga tgacaataaa atcaatcctt
      541 actcatgctc ttgatgttgc tgaagttcct gagattgttg gactactgta gtttattagg
      601 ataagcttct gcaagttgct ttcgaggaga cactggttga gggattcatt ttttatttct
      661 ttgatgaaga aatgtaagct ctcaaattac aaagattttg aaatggttga gtttgctgta
      721 aggacaattt tggactgcaa aaccttggcc ttttaacgac gatgcagatg agttttcgga
      781 gtatatttgg tttttaaact aatatatcat tgtgtaattt cgcagaaagt gtatgttggg
      841 ttggattttc aaacttctat gttgatatat ttaagttcgt taccgtctat tatgtagctt
      901 tgaacatgtt gaattatcag gttggtcctg ttgttaaggt ttgtgttaag gtcttggtta
      961 tatgggttca aaactatttc aataatccaa cccaagtttc ctgcattgag atgatattga
     1021 tagatgagga ggtttgtctc actattctac aaccccctat tattttatct ttttattttt
     1081 tcgattaatt acttcttaca gtatatctat taactatgtg tagataaata agaaacttga
     1141 gtgacttgac aagtttgtaa tagggtatta aataaccaaa actatgggtt gacatagtaa
     1201 taataaaggt ctcgtgaggg ttggtgtata tgcataacca gaactaaggg ccactaagaa
     1261 ctgtacatct aaatgagaag aaaatcggga gcagtttgaa tgataagata tccaagttca
     1321 ggtaataggt atgtttaatt atcttttttg ttttgtgttt tatgtctata tagatcagat
     1381 atttttgcaa atcttttatg tatgcggtat gccatacggt aaaacacatt cgatcataaa
     1441 aatcgctaac atcatgtttg aatttggtaa atagagagtc ctattagttt ggccaataca
     1501 aaatattata cagggtttgg gaggactttt tggaatgcaa cgtggttctt ctaacagaaa
     1561 ctttgttagt catctttcga aatgattcaa tagattgcct ttattttatg tattcatctt
     1621 ttggatataa tgagatttat atgttaagag atcatagttg tgtggtatgg taatatcgag
     1681 ggaagaacct cataggggca gtgaggtcaa tccctccttt tgtatatgtt agttttttta
     1741 aaaggcggta ttttttcatt gtatatttat ataatttata aaa
//
LOCUS       XR_011757173            1673 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides C2 domain-containing protein
            At1g53590-like (LOC139839997), transcript variant X5, misc_RNA.
ACCESSION   XR_011757173
VERSION     XR_011757173.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1673
                     /gene="LOC139839997"
                     /note="C2 domain-containing protein At1g53590-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839997"
     misc_RNA        1..1673
                     /gene="LOC139839997"
                     /product="C2 domain-containing protein At1g53590-like,
                     transcript variant X5"
                     /db_xref="GeneID:139839997"
ORIGIN      
        1 tttttttttt cttccaaaaa ccattccgga taccaaatcg tcaaatacta taatcaacca
       61 tctttgaatc ccttgatgaa tgcatgaata ccgaaattat cggtttacga atctaatttc
      121 gattcggatg agggaaaaca gacaatctaa tttgaaaccc ttgctctaat ttcgataatc
      181 aaatcgatca aagttgttta atactattat tgttcagaag atgattatcc actccaaacg
      241 aattcataac cttaattaga gaaatcaagg cttttaattg attttgcaaa gagagttttg
      301 taagaggttc atcataattc tcaacaagat tcaggaggaa agtgaggttc gaaaaaagaa
      361 ggcaaggtga ataattggat ttgtaactac tgtataaaag tgaactccac aacaaaatgc
      421 atgctgaatg aaagcttttg gtgggggatt aagtttcttc cgagatggcc gtttcttgga
      481 cttctaaggg tgtgttttgt caaaccacct tactttcgga tgacaataaa atcaatcctt
      541 actcatgctc ttgatgttgc tgaagttcct gagattgttg gactactgta gtttattagg
      601 ataagcttct gcaagttgct ttcgaggaga cactggttga ggtaacgttt ttttgcgtaa
      661 aaaaatattc agttatagga tgtgtactgg attacatagt tggtactgat tagatgatct
      721 attgtaaaat atattgtcag ggattcattt tttatttctt tgatgaagaa atgtaagctc
      781 tcaaattaca aaggtaaaac tatgattttc tattttctgc aactaaaatc acattttcta
      841 tatttatttt tcatgcttac atggaatcag attttgaaat ggttgagttt gctgtaagga
      901 caattttgga ctgcaaaacc ttggcctttt aacgacgatg cagatgagtt ttcggagtat
      961 atttggtttt taaactaata tatcattgtg taatttcgca gaaagtgtat gttgggttgg
     1021 attttcaaac ttctatgttg atatatttaa gttcgttacc gtctattatg tagctttgaa
     1081 catgttgaat tatcaggttg gtcctgttgt taaggtttgt gttaaggtct tggttatatg
     1141 ggttcaaaac tatttcaata atccaaccca agtttcctgc attgagatga tattgataga
     1201 tgaggaggtt tgtctcacta ttctacaacc ccctattatt ttatcttttt attttttcga
     1261 ttaattactt cttacagtat atctattaac tatgtgtaga taaataagaa acttgagtga
     1321 cttgacaagt ttgtaatagg gtattaaata accaaaacta tgggttgaca tagtaataat
     1381 aaaggtctcg tgagggttgg tgtatatgca taaccagaac taagggccac taagaactgt
     1441 acatctaaat gagaagaaaa tcgggagcag tttgaatgat aagatatcca agttcaggta
     1501 ataggacttg gtgtattgac attgtaattc cagattacta gggacacttc aaaagaggta
     1561 caattaaggg actttggatc aaacctcacc acaccatcga agcgcaagag caagaaaaat
     1621 gtggaaccca caccttcacc ctcaaccaca caagttcaag ctgccgatga ttc
//
LOCUS       XR_011757174            1891 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides C2 domain-containing protein
            At1g53590-like (LOC139839997), transcript variant X6, misc_RNA.
ACCESSION   XR_011757174
VERSION     XR_011757174.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1891
                     /gene="LOC139839997"
                     /note="C2 domain-containing protein At1g53590-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139839997"
     misc_RNA        1..1891
                     /gene="LOC139839997"
                     /product="C2 domain-containing protein At1g53590-like,
                     transcript variant X6"
                     /db_xref="GeneID:139839997"
ORIGIN      
        1 tttttttttt cttccaaaaa ccattccgga taccaaatcg tcaaatacta taatcaacca
       61 tctttgaatc ccttgatgaa tgcatgaata ccgaaattat cggtttacga atctaatttc
      121 gattcggatg agggaaaaca gacaatctaa tttgaaaccc ttgctctaat ttcgataatc
      181 aaatcgatca aagttgttta atactattat tgttcagaag atgattatcc actccaaacg
      241 aattcataac cttaattaga gaaatcaagg cttttaattg attttgcaaa gagagttttg
      301 taagaggttc atcataattc tcaacaagat tcaggaggaa agtgaggttc gaaaaaagaa
      361 ggcaagcttt tggtggggga ttaagtttct tccgagatgg ccgtttcttg gacttctaag
      421 ggtgtgtttt gtcaaaccac cttactttcg gatgacaata aaatcaatcc ttactcatgc
      481 tcttgatgtt gctgaagttc ctgagattgt tggactactg tagtttatta ggataagctt
      541 ctgcaagttg ctttcgagga gacactggtt gaggtaacgt ttttttgcgt aaaaaaatat
      601 tcagttatag gatgtgtact ggattacata gttggtactg attagatgat ctattgtaaa
      661 atatattgtc agggattcat tttttatttc tttgatgaag aaatgtaagc tctcaaatta
      721 caaaggtaaa actatgattt tctattttct gcaactaaaa tcacattttc tatatttatt
      781 tttcatgctt acatggaatc agattttgaa atggttgagt ttgctgtaag gacaattttg
      841 gactgcaaaa ccttggcctt ttaacgacga tgcagatgag ttttcggagt atatttggtt
      901 tttaaactaa tatatcattg tgtaatttcg cagaaagtgt atgttgggtt ggattttcaa
      961 acttctatgt tgatatattt aagttcgtta ccgtctatta tgtagctttg aacatgttga
     1021 attatcaggt tggtcctgtt gttaaggttt gtgttaaggt cttggttata tgggttcaaa
     1081 actatttcaa taatccaacc caagtttcct gcattgagat gatattgata gatgaggagg
     1141 tttgtctcac tattctacaa ccccctatta ttttatcttt ttattttttc gattaattac
     1201 ttcttacagt atatctatta actatgtgta gataaataag aaacttgagt gacttgacaa
     1261 gtttgtaata gggtattaaa taaccaaaac tatgggttga catagtaata ataaaggtct
     1321 cgtgagggtt ggtgtatatg cataaccaga actaagggcc actaagaact gtacatctaa
     1381 atgagaagaa aatcgggagc agtttgaatg ataagatatc caagttcagg taataggtat
     1441 gtttaattat cttttttgtt ttgtgtttta tgtctatata gatcagatat ttttgcaaat
     1501 cttttatgta tgcggtatgc catacggtaa aacacattcg atcataaaaa tcgctaacat
     1561 catgtttgaa tttggtaaat agagagtcct attagtttgg ccaatacaaa atattataca
     1621 gggtttggga ggactttttg gaatgcaacg tggttcttct aacagaaact ttgttagtca
     1681 tctttcgaaa tgattcaata gattgccttt attttatgta ttcatctttt ggatataatg
     1741 agatttatat gttaagagat catagttgtg tggtatggta atatcgaggg aagaacctca
     1801 taggggcagt gaggtcaatc cctccttttg tatatgttag tttttttaaa aggcggtatt
     1861 ttttcattgt atatttatat aatttataaa a
//
LOCUS       XR_011757175            1246 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839998), transcript variant X1, ncRNA.
ACCESSION   XR_011757175
VERSION     XR_011757175.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1246
                     /gene="LOC139839998"
                     /note="uncharacterized LOC139839998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839998"
     ncRNA           1..1246
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839998"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839998"
ORIGIN      
        1 caaattgttc caaatcgata gcgttcgtca aattgttcca aatcgatagc gttcgtcaaa
       61 ttgttcgtca acaaactcaa tagcgttcgt cagatagggc tcgtcaaaat cgttcgtcag
      121 ttcaagtgtc ctgcttaaaa tcggatgata cgagcagatg attggtgcaa gtattagagc
      181 atcaagagag aattggaaag gatgtggcca aaaggatcac tgatttatgt agtatgcttg
      241 tttttgtatg ttagtggcct taaggatcat tgatatcaac taaatcgttt gacaccaaat
      301 gcaagagatg gttctatgac cactgatctt tcaacaacga cagtgaaaga tgcgaagaag
      361 attatcaaat ttaaaaaaaa aaataagtct gctatcattc atgttggtct tggaaagcta
      421 atctacaata atgcagccat gttgaagaca tttgttgtgt tgatgtaact tccagatcct
      481 ttatgttatt ccattaattg ctgatcactt ctatatcatg gaaagaaaat gagctcaaca
      541 tggttgatac acctgtacat gcagattttg atggtgaggt aggtctttgc taacaacgat
      601 tacttacaca taacacatgt attatttata aattttatta tttagtgttc cagagaatct
      661 aaaaaaatat agatgcgtac ttgcgatata atagttaaac tgcacttgaa actcttcgat
      721 gctcagactt gttcttaagg ggtctttgga tgtgtgtttt tccatttgat tatatgatgt
      781 tttcacatag ggttcatgtt tcaaccacac actttttagt ttttgaggta aaatataaaa
      841 taccaatatg tgtcatctgt accaactagt acaccttata cttttaagtt actgttttca
      901 cttgctctat ttcttttttg ttataacagg gacacattag aggaagacaa gtctatcaat
      961 ctttacttgc ttgtgtagat aacaaggctg cttaaagatt catttgaagg ctttaatttg
     1021 gtcaaagatg agtacaggac tgccgatatc ttcatcaatg aatatggcag tctgttggtg
     1081 ttttttgatt ttcaagaact taatacactt tatatgtatg taaatcataa taagtgtttt
     1141 aaattttgag taatttgatg cgtgaatcat attttggtgt actagtacag aaaatttgtt
     1201 gtaatgactg caaaactgaa tataaggaat catatttttg tttgta
//
LOCUS       XR_011757176            1314 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839998), transcript variant X2, ncRNA.
ACCESSION   XR_011757176
VERSION     XR_011757176.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1314
                     /gene="LOC139839998"
                     /note="uncharacterized LOC139839998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839998"
     ncRNA           1..1314
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839998"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839998"
ORIGIN      
        1 caaattgttc caaatcgata gcgttcgtca aattgttcca aatcgatagc gttcgtcaaa
       61 ttgttcgtca acaaactcaa tagcgttcgt cagatagggc tcgtcaaaat cgttcgtcag
      121 ttcaagtgtc ctgcttaaaa tcggatgata cgagcagatg attggtgcaa gtattagagc
      181 atcaagagag aattggaaag gatgtggcca aaaggatcac tgatttatgt agtatgcttg
      241 tttttgtatg ttagtggcct taaggatcat tgatatcaac taaatcgttt gacaccaaat
      301 gcaagagatg gttctatgac cactgatctt tcaacaacga cagtgaaaga tgcgaagaag
      361 attatcaaat ttaaaaaaaa aaataagtct gctatcattc atgttggtct tggaaagata
      421 acatatgctt tcatgagttg tgagatcact aaacgttcat tttagatatg ctttcatcga
      481 atttgctaat ctacaataat gcagccatgt tgaagacatt tgttgtgttg atgtaacttc
      541 cagatccttt atgttattcc attaattgct gatcacttct atatcatgga aagaaaatga
      601 gctcaacatg gttgatacac ctgtacatgc agattttgat ggtgaggtag gtctttgcta
      661 acaacgatta cttacacata acacatgtat tatttataaa ttttattatt tagtgttcca
      721 gagaatctaa aaaaatatag atgcgtactt gcgatataat agttaaactg cacttgaaac
      781 tcttcgatgc tcagacttgt tcttaagggg tctttggatg tgtgtttttc catttgatta
      841 tatgatgttt tcacataggg ttcatgtttc aaccacacac tttttagttt ttgaggtaaa
      901 atataaaata ccaatatgtg tcatctgtac caactagtac accttatact tttaagttac
      961 tgttttcact tgctctattt cttttttgtt ataacaggga cacattagag gaagacaagt
     1021 ctatcaatct ttacttgctt gtgtagataa caaggctgct taaagattca tttgaaggct
     1081 ttaatttggt caaagatgag tacaggactg ccgatatctt catcaatgaa tatggcagtc
     1141 tgttggtgtt ttttgatttt caagaactta atacacttta tatgtatgta aatcataata
     1201 agtgttttaa attttgagta atttgatgcg tgaatcatat tttggtgtac tagtacagaa
     1261 aatttgttgt aatgactgca aaactgaata taaggaatca tatttttgtt tgta
//
LOCUS       XR_011757177            1227 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839998), transcript variant X3, ncRNA.
ACCESSION   XR_011757177
VERSION     XR_011757177.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1227
                     /gene="LOC139839998"
                     /note="uncharacterized LOC139839998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839998"
     ncRNA           1..1227
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839998"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839998"
ORIGIN      
        1 caaattgttc caaatcgata gcgttcgtca aattgttcca aatcgatagc gttcgtcaaa
       61 ttgttcgtca acaaactcaa tagcgttcgt cagatagggc tcgtcaaaat cgttcgtcag
      121 ttcaagtgtc ctgcttaaaa tcggatgata cgagcagatg attggtgcaa gtattagagc
      181 atcaagagag aattggaaag gatgtggcca aaaggatcac tgatttatgt agtatgcttg
      241 tttttgtatg ttagtggcct taaggatcat tgatatcaac taaatcgttt gacaccaaat
      301 gcaagagatg gttctatgac cactgatctt tcaacaacga cagtgaaaga tgcgaagaag
      361 attatcaaat ttaaaaaaaa aaataagtct gctatcattc atgttggtct tggaaagcca
      421 tgttgaagac atttgttgtg ttgatgtaac ttccagatcc tttatgttat tccattaatt
      481 gctgatcact tctatatcat ggaaagaaaa tgagctcaac atggttgata cacctgtaca
      541 tgcagatttt gatggtgagg taggtctttg ctaacaacga ttacttacac ataacacatg
      601 tattatttat aaattttatt atttagtgtt ccagagaatc taaaaaaata tagatgcgta
      661 cttgcgatat aatagttaaa ctgcacttga aactcttcga tgctcagact tgttcttaag
      721 gggtctttgg atgtgtgttt ttccatttga ttatatgatg ttttcacata gggttcatgt
      781 ttcaaccaca cactttttag tttttgaggt aaaatataaa ataccaatat gtgtcatctg
      841 taccaactag tacaccttat acttttaagt tactgttttc acttgctcta tttctttttt
      901 gttataacag ggacacatta gaggaagaca agtctatcaa tctttacttg cttgtgtaga
      961 taacaaggct gcttaaagat tcatttgaag gctttaattt ggtcaaagat gagtacagga
     1021 ctgccgatat cttcatcaat gaatatggca gtctgttggt gttttttgat tttcaagaac
     1081 ttaatacact ttatatgtat gtaaatcata ataagtgttt taaattttga gtaatttgat
     1141 gcgtgaatca tattttggtg tactagtaca gaaaatttgt tgtaatgact gcaaaactga
     1201 atataaggaa tcatattttt gtttgta
//
LOCUS       XR_011757178            1295 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839998), transcript variant X4, ncRNA.
ACCESSION   XR_011757178
VERSION     XR_011757178.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1295
                     /gene="LOC139839998"
                     /note="uncharacterized LOC139839998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839998"
     ncRNA           1..1295
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839998"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839998"
ORIGIN      
        1 caaattgttc caaatcgata gcgttcgtca aattgttcca aatcgatagc gttcgtcaaa
       61 ttgttcgtca acaaactcaa tagcgttcgt cagatagggc tcgtcaaaat cgttcgtcag
      121 ttcaagtgtc ctgcttaaaa tcggatgata cgagcagatg attggtgcaa gtattagagc
      181 atcaagagag aattggaaag gatgtggcca aaaggatcac tgatttatgt agtatgcttg
      241 tttttgtatg ttagtggcct taaggatcat tgatatcaac taaatcgttt gacaccaaat
      301 gcaagagatg gttctatgac cactgatctt tcaacaacga cagtgaaaga tgcgaagaag
      361 attatcaaat ttaaaaaaaa aaataagtct gctatcattc atgttggtct tggaaagata
      421 acatatgctt tcatgagttg tgagatcact aaacgttcat tttagatatg ctttcatcga
      481 atttgccatg ttgaagacat ttgttgtgtt gatgtaactt ccagatcctt tatgttattc
      541 cattaattgc tgatcacttc tatatcatgg aaagaaaatg agctcaacat ggttgataca
      601 cctgtacatg cagattttga tggtgaggta ggtctttgct aacaacgatt acttacacat
      661 aacacatgta ttatttataa attttattat ttagtgttcc agagaatcta aaaaaatata
      721 gatgcgtact tgcgatataa tagttaaact gcacttgaaa ctcttcgatg ctcagacttg
      781 ttcttaaggg gtctttggat gtgtgttttt ccatttgatt atatgatgtt ttcacatagg
      841 gttcatgttt caaccacaca ctttttagtt tttgaggtaa aatataaaat accaatatgt
      901 gtcatctgta ccaactagta caccttatac ttttaagtta ctgttttcac ttgctctatt
      961 tcttttttgt tataacaggg acacattaga ggaagacaag tctatcaatc tttacttgct
     1021 tgtgtagata acaaggctgc ttaaagattc atttgaaggc tttaatttgg tcaaagatga
     1081 gtacaggact gccgatatct tcatcaatga atatggcagt ctgttggtgt tttttgattt
     1141 tcaagaactt aatacacttt atatgtatgt aaatcataat aagtgtttta aattttgagt
     1201 aatttgatgc gtgaatcata ttttggtgta ctagtacaga aaatttgttg taatgactgc
     1261 aaaactgaat ataaggaatc atatttttgt ttgta
//
LOCUS       XR_011757179             895 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839998), transcript variant X5, ncRNA.
ACCESSION   XR_011757179
VERSION     XR_011757179.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..895
                     /gene="LOC139839998"
                     /note="uncharacterized LOC139839998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839998"
     ncRNA           1..895
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839998"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839998"
ORIGIN      
        1 caaattgttc caaatcgata gcgttcgtca aattgttcca aatcgatagc gttcgtcaaa
       61 ttgttcgtca acaaactcaa tagcgttcgt cagatagggc tcgtcaaaat cgttcgtcag
      121 ttcaagtgtc ctgcttaaaa tcggatgata cgagcagatg attggtgcaa gtattagagc
      181 atcaagagag aattggaaag gatgtggcca aaaggatcac tgatttatgt agtatgcttg
      241 tttttgtatg ttagtggcct taaggatcat tgatatcaac taaatcgttt gacaccaaat
      301 gcaagagatg gttctatgac cactgatctt tcaacaacga cagtgaaaga tgcgaagaag
      361 attatcaaat ttaaaaaaaa aaataagtct gctatcattc atgttggtct tggaaagcta
      421 atctacaata atgcagccat gttgaagaca tttgttgtgt tgatgtaact tccagatcct
      481 ttatgttatt ccattaattg ctgatcactt ctatatcatg gaaagaaaat gagctcaaca
      541 tggttgatac acctgtacat gcagattttg atggtgaggg acacattaga ggaagacaag
      601 tctatcaatc tttacttgct tgtgtagata acaaggctgc ttaaagattc atttgaaggc
      661 tttaatttgg tcaaagatga gtacaggact gccgatatct tcatcaatga atatggcagt
      721 ctgttggtgt tttttgattt tcaagaactt aatacacttt atatgtatgt aaatcataat
      781 aagtgtttta aattttgagt aatttgatgc gtgaatcata ttttggtgta ctagtacaga
      841 aaatttgttg taatgactgc aaaactgaat ataaggaatc atatttttgt ttgta
//
LOCUS       XR_011757180            1188 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839998), transcript variant X6, ncRNA.
ACCESSION   XR_011757180
VERSION     XR_011757180.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1188
                     /gene="LOC139839998"
                     /note="uncharacterized LOC139839998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839998"
     ncRNA           1..1188
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839998"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839998"
ORIGIN      
        1 caaattgttc caaatcgata gcgttcgtca aattgttcca aatcgatagc gttcgtcaaa
       61 ttgttcgtca acaaactcaa tagcgttcgt cagatagggc tcgtcaaaat cgttcgtcag
      121 ttcaagtgtc ctgcttaaaa tcggatgata cgagcagatg attggtgcaa gtattagagc
      181 atcaagagag aattggaaag gatgtggcca aaaggatcac tgatttatgt agtatgcttg
      241 tttttgtatg ttagtggcct taaggatcat tgatatcaac taaatcgttt gacaccaaat
      301 gcaagagatg gttctatgac cactgatctt tcaacaacga cagtgaaaga tgcgaagaag
      361 attatcaaat ttaaaaaaaa aaataagtct gctatcattc atgttggtct tggaaagatc
      421 ctttatgtta ttccattaat tgctgatcac ttctatatca tggaaagaaa atgagctcaa
      481 catggttgat acacctgtac atgcagattt tgatggtgag gtaggtcttt gctaacaacg
      541 attacttaca cataacacat gtattattta taaattttat tatttagtgt tccagagaat
      601 ctaaaaaaat atagatgcgt acttgcgata taatagttaa actgcacttg aaactcttcg
      661 atgctcagac ttgttcttaa ggggtctttg gatgtgtgtt tttccatttg attatatgat
      721 gttttcacat agggttcatg tttcaaccac acacttttta gtttttgagg taaaatataa
      781 aataccaata tgtgtcatct gtaccaacta gtacacctta tacttttaag ttactgtttt
      841 cacttgctct atttcttttt tgttataaca gggacacatt agaggaagac aagtctatca
      901 atctttactt gcttgtgtag ataacaaggc tgcttaaaga ttcatttgaa ggctttaatt
      961 tggtcaaaga tgagtacagg actgccgata tcttcatcaa tgaatatggc agtctgttgg
     1021 tgttttttga ttttcaagaa cttaatacac tttatatgta tgtaaatcat aataagtgtt
     1081 ttaaattttg agtaatttga tgcgtgaatc atattttggt gtactagtac agaaaatttg
     1141 ttgtaatgac tgcaaaactg aatataagga atcatatttt tgtttgta
//
LOCUS       XR_011757181            1256 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139839998), transcript variant X7, ncRNA.
ACCESSION   XR_011757181
VERSION     XR_011757181.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1256
                     /gene="LOC139839998"
                     /note="uncharacterized LOC139839998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139839998"
     ncRNA           1..1256
                     /ncRNA_class="lncRNA"
                     /gene="LOC139839998"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139839998"
ORIGIN      
        1 caaattgttc caaatcgata gcgttcgtca aattgttcca aatcgatagc gttcgtcaaa
       61 ttgttcgtca acaaactcaa tagcgttcgt cagatagggc tcgtcaaaat cgttcgtcag
      121 ttcaagtgtc ctgcttaaaa tcggatgata cgagcagatg attggtgcaa gtattagagc
      181 atcaagagag aattggaaag gatgtggcca aaaggatcac tgatttatgt agtatgcttg
      241 tttttgtatg ttagtggcct taaggatcat tgatatcaac taaatcgttt gacaccaaat
      301 gcaagagatg gttctatgac cactgatctt tcaacaacga cagtgaaaga tgcgaagaag
      361 attatcaaat ttaaaaaaaa aaataagtct gctatcattc atgttggtct tggaaagata
      421 acatatgctt tcatgagttg tgagatcact aaacgttcat tttagatatg ctttcatcga
      481 atttgatcct ttatgttatt ccattaattg ctgatcactt ctatatcatg gaaagaaaat
      541 gagctcaaca tggttgatac acctgtacat gcagattttg atggtgaggt aggtctttgc
      601 taacaacgat tacttacaca taacacatgt attatttata aattttatta tttagtgttc
      661 cagagaatct aaaaaaatat agatgcgtac ttgcgatata atagttaaac tgcacttgaa
      721 actcttcgat gctcagactt gttcttaagg ggtctttgga tgtgtgtttt tccatttgat
      781 tatatgatgt tttcacatag ggttcatgtt tcaaccacac actttttagt ttttgaggta
      841 aaatataaaa taccaatatg tgtcatctgt accaactagt acaccttata cttttaagtt
      901 actgttttca cttgctctat ttcttttttg ttataacagg gacacattag aggaagacaa
      961 gtctatcaat ctttacttgc ttgtgtagat aacaaggctg cttaaagatt catttgaagg
     1021 ctttaatttg gtcaaagatg agtacaggac tgccgatatc ttcatcaatg aatatggcag
     1081 tctgttggtg ttttttgatt ttcaagaact taatacactt tatatgtatg taaatcataa
     1141 taagtgtttt aaattttgag taatttgatg cgtgaatcat attttggtgt actagtacag
     1201 aaaatttgtt gtaatgactg caaaactgaa tataaggaat catatttttg tttgta
//
LOCUS       XM_071830219            1690 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent
            mitochondrial ATP-magnesium/phosphate carrier protein 2-like
            (LOC139839999), mRNA.
ACCESSION   XM_071830219
VERSION     XM_071830219.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1690
                     /gene="LOC139839999"
                     /note="calcium-dependent mitochondrial
                     ATP-magnesium/phosphate carrier protein 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139839999"
     CDS             95..1582
                     /gene="LOC139839999"
                     /codon_start=1
                     /product="calcium-dependent mitochondrial
                     ATP-magnesium/phosphate carrier protein 2-like"
                     /protein_id="XP_071686320.1"
                     /db_xref="GeneID:139839999"
                     /translation="MTSPAVKHSEDLRRPENGCNPVRKPGPVSLDHVLSALGETKEER
                     ELRFRSLFNFFDTSNAGYLDSVQIEVGLSALQIPADYKYAKELLRVCDANRDGRVDYQ
                     EFRRYMDDKELELYQIFQAIDVEHNGCILPEELYDALVKAGIELDDDELASFVERVDK
                     DNNGIITFEEWRDFLLLYPHEATIENIYQYWERVSLVDIGEQAVIPAGISKHVHASKY
                     LIAGGVAGAASRTATAPLDRLKVVLQVQTTRAAIGPAVKNIWKEGGILSFFRGNGLNV
                     VKVAPESAIKFYTYELLKDFIGGGDKDDIGTSGRLVAGGMAGAVAQTAIYPMDLVKTR
                     LQTYVCDAGKVPSLGKLSKDIWVKEGPRAFYKGIIPSLLGIVPYAGIDLAVYETLKEM
                     SKTYILVDSDPGPLAQLGCGTVSGSLGATCVYPLQVVRTRMQAHRAEGADAYKGMSDV
                     FMRTYKNEGVRGFYKGLFPNLLKVIPAASITYMVYEAMKKTLDLE"
     misc_feature    218..619
                     /gene="LOC139839999"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; Region: FRQ1; COG5126"
                     /db_xref="CDD:444056"
     misc_feature    752..1570
                     /gene="LOC139839999"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional; Region: PTZ00169"
                     /db_xref="CDD:240302"
ORIGIN      
        1 acaaaaaact gtatttgtat ctcctagatc tgttcacttc taccagaaat cgcgagtatg
       61 tgcatagatt ccacaaatta acatttccgt acggatgaca tcgccggcgg tcaagcattc
      121 cgaagacctc cgtcggccgg aaaacggttg taatccggtg agaaaaccag gaccggtatc
      181 attggatcac gttttgtcag cattaggtga aacaaaagaa gaacgtgaat tacgatttcg
      241 aagtttattt aattttttcg atacatcaaa cgcaggctat ttagattccg tacagatcga
      301 ggtaggttta tctgctttac aaattccggc tgattataaa tatgccaagg aattacttag
      361 ggtttgtgat gcgaatcgag atggtagagt tgattatcag gaatttagga gatatatgga
      421 tgataaagag cttgagttgt atcaaatttt tcaagcaatt gatgttgaac ataatggatg
      481 tatcttacct gaagaacttt atgatgcact tgttaaggct gggatagaac tagatgatga
      541 cgaactcgct agctttgtgg aacgtgttga caaagataac aacggcatca taacttttga
      601 agaatggcgt gattttcttc ttctttatcc tcatgaagct acaattgaga acatctacca
      661 atattgggaa cgagtatcac tcgtagatat cggggaacaa gctgtaattc cagctggcat
      721 cagcaaacac gtgcatgcca gcaaatatct aatcgccggt ggggttgcgg gtgccgcttc
      781 tcgaaccgcc actgcacccc ttgaccgcct taaggtggta ttgcaagttc agaccactcg
      841 tgctgcgatc ggacctgcag tcaaaaacat atggaaggaa ggtgggattt tatcattttt
      901 tagaggtaac gggttgaatg ttgttaaggt ggcccccgag agtgctatta agttttacac
      961 ttatgaattg ttgaaggatt ttattggcgg gggagataag gatgatatag gaacatctgg
     1021 gcggcttgtg gcgggaggta tggcgggtgc agttgcacaa acggctattt atccaatgga
     1081 tctagtgaaa acgcgtttac aaacatacgt ttgtgatgct ggaaaggttc ctagtttggg
     1141 gaaactatca aaggatatat gggttaaaga aggacctcgg gctttttaca aggggattat
     1201 accttcgctt cttggaattg ttccttatgc aggaattgat ttagctgttt atgagacttt
     1261 gaaggagatg tcaaaaacgt atattcttgt tgacagtgac cctggacctc tagcgcaatt
     1321 aggttgtggc acagtttcag ggtcccttgg agccacctgt gtgtacccat tgcaagttgt
     1381 caggacaagg atgcaagcac atcgtgctga aggagctgat gcgtacaaag ggatgtctga
     1441 tgtgttcatg agaacttata aaaacgaagg ggtacgaggt ttctacaaag gacttttccc
     1501 aaatctttta aaagtaatac cagctgccag catcacatac atggtttatg aagcaatgaa
     1561 aaagacgcta gatcttgaat gatgccaatg atgataatga taatgataat gatgatgatg
     1621 acacgataat gaaaattaga ataaaaagta gattttgtag gtgatgcccg ttgttgggga
     1681 gttgcatgtt
//
LOCUS       XM_071830220            2375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840000), mRNA.
ACCESSION   XM_071830220
VERSION     XM_071830220.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2375
                     /gene="LOC139840000"
                     /note="uncharacterized LOC139840000; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840000"
     CDS             240..1916
                     /gene="LOC139840000"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686321.1"
                     /db_xref="GeneID:139840000"
                     /translation="MNTRVKTNLRSMKTTSFKDPKVDNMQMQMETMKTSTSRRGSIRE
                     RKIALQQDVEKLKKRLRHEENVHRALERAFTRPLGALPRLPPYLPPTTLELLAEVAVL
                     EEEVVRLEEQVVYFRQGLYQEAVYISSSKRNLENSLDFQDSIDCKNKAPKLSPQIETN
                     PSTPAIKISHSISEHQSSKAIKNRIHSTDPKSQTPKRSPADSKSAAKRLEPRKLQFEG
                     KVMDGTNVEGRNNLMQEKGLLASSSVDDDPNKISESILKCLLNIFLRMSSTRSKSITE
                     RLPSLTSVDTMEETEFKDPYDICFDFEKREIGPYKYLYAIEATSINKNGTTNSIFLIQ
                     RLKLLLGKLVSVDLTSLTHQQKLAFWINIYNSCMMNASLEHGIPESPEMVVQLMQKAT
                     INVGGHYLNAISIEHFILRLPYHSKYTFAKGVKNDEITARSVFGLELSEPLVTFALSC
                     GSWSSPAVRIYTGSQVENELELAKKDYLQAAIGISSTKKMVAIPKLLDWYMLDFAKDI
                     DSLMDWVCLQLPNEVGKQAMMCLERNKSVPFSNCLRVIPYEFKFRYLLHK"
     misc_feature    366..>554
                     /gene="LOC139840000"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     Region: Lzipper-MIP1; pfam14389"
                     /db_xref="CDD:464163"
     misc_feature    1296..1673
                     /gene="LOC139840000"
                     /note="Protein of unknown function, DUF547; Region:
                     DUF547; pfam04784"
                     /db_xref="CDD:461427"
ORIGIN      
        1 ttcaactttc ttgtatgtat atgtgattcc cacttatcaa gaccaacact ctgctcttga
       61 agattttaac tttcagcctt ttttcaaaca tttagtatca cttttggcaa ttggttgtaa
      121 ttaatgtttg ttaaaagaac agaattcatt tggcagataa aaatgatgat gaagaatgac
      181 ccattccttt aaagtgttaa ttaatgttta agttgttgtg aagaattttg tgtataaaga
      241 tgaatactag agtaaagaca aatttaaggt ccatgaaaac aacttcattt aaagatccaa
      301 aggttgataa catgcaaatg caaatggaga ctatgaaaac aagcacaagc agaagaggtt
      361 caattagaga gagaaaaata gcattgcaac aagatgttga gaagctaaaa aagagactta
      421 gacatgaaga aaatgttcat agagctttag aaagagcatt tacaaggcca ttgggagcgt
      481 taccacggtt accgccttat ttacctccta cgacattgga gcttctagca gaagttgcag
      541 ttttagaaga agaggttgtt aggcttgaag aacaagtggt ttattttagg caaggcctat
      601 atcaagaagc tgtctacatt tcatcctcaa aaagaaatct tgaaaattca cttgattttc
      661 aagattcaat agattgtaaa aataaggctc ctaagttgtc acctcaaatt gagacaaatc
      721 catccacacc tgctataaaa atttcacata gcatttcaga gcaccaatca tcaaaggcta
      781 ttaagaacag gatacactcg acggatccaa aatctcaaac gcctaagaga tcacctgctg
      841 attctaagtc agcagcgaag cgtttagaac ctagaaaatt acagtttgaa ggtaaagtaa
      901 tggatggtac aaatgtagag ggaagaaaca atttgatgca agaaaaagga ctattagcat
      961 catcatcagt agatgatgat ccaaacaaga tttctgaaag tattttaaaa tgtttgttaa
     1021 acattttcct gcgaatgagt tcgacaagaa gtaaaagcat aacagaaagg ctgccttcat
     1081 tgacttcagt tgacacaatg gaagaaacag aattcaagga tccttatgac atctgttttg
     1141 atttcgagaa aagagaaatt ggcccgtata aatatttata cgctattgaa gccacctcca
     1201 tcaacaaaaa cggcacgaca aattctatat ttttgataca aagattgaaa ctcctgcttg
     1261 ggaagcttgt atcagtcgac ttaactagtc tcacccatca acaaaagctc gctttttgga
     1321 tcaatatcta taattcgtgc atgatgaatg catctcttga acatggaatc ccagaaagtc
     1381 ctgagatggt ggttcaacta atgcaaaagg caactataaa tgttggagga cattatttaa
     1441 acgcaatcag catcgaacat tttatactga gactccctta tcattctaaa tatactttcg
     1501 ccaaaggtgt aaaaaatgat gagataaccg caagaagtgt gtttgggctg gaattatcag
     1561 aaccattagt aacatttgca ctctcctgtg gaagctggtc ctcccctgct gtaagaatct
     1621 acacggggtc tcaagttgaa aatgaacttg aattagcgaa aaaagattat ttacaagctg
     1681 caattgggat ttcaagcaca aagaagatgg tggcgattcc taaattattg gattggtata
     1741 tgctcgattt cgccaaagat attgactcgt tgatggattg ggtatgcctt caattaccaa
     1801 atgaagtcgg aaaacaagca atgatgtgtc tcgaaaggaa taaaagcgtt ccgttttcaa
     1861 attgtcttcg ggtaatacct tacgagttta aattcaggta tcttttgcac aaataaaaat
     1921 agtttttgca ttcatcttat tagagatata tattcttgag gtatagattt gtacacagtt
     1981 tgttatataa cacaaatgga agtagatatt tatataaatc catgcaccac caatgtaagt
     2041 atcattcatt atgttgatta atttgttata aaaagtttta gtttctgaga tgtcgttaaa
     2101 gctagatatc tgttatagaa acaagtcgag ggttgtgaag tttagagatt ttgtaagacc
     2161 atttgtatcc agttgtctcc ggaacattgt gaccgtgatg tggcaacggt gactccagtt
     2221 aacactgcta ccgcggcatc accggtaatg gattgtcgac gtaagtcact tgattgacta
     2281 aggagatggc tggcgtcagg ggcacgtggc acaccctgat tgacagggcc gtcttaacaa
     2341 ttcgaaggcc ctaggcgaaa acaaaaatga gcctt
//
LOCUS       XM_071830221            2306 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ESMERALDA 1-like
            (LOC139840002), mRNA.
ACCESSION   XM_071830221
VERSION     XM_071830221.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2306
                     /gene="LOC139840002"
                     /note="protein ESMERALDA 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     Proteins"
                     /db_xref="GeneID:139840002"
     CDS             167..1834
                     /gene="LOC139840002"
                     /codon_start=1
                     /product="protein ESMERALDA 1-like"
                     /protein_id="XP_071686322.1"
                     /db_xref="GeneID:139840002"
                     /translation="MHANIRIPATGTNSPSPPATPLRSPRHRHSRSAFKTSGRITHRS
                     FSQRFAWIIISFLVRRQGALLLVPLLYFITMLYYHPDTDVTYDGIRPPFAIGSVYRSP
                     ELYAKLRHDMDADNSTADAMSTVWKRAKGADWKPCIDKSSAGLPDSNGYIYVEANGGL
                     NQQRTSICNAVAVAGYLNATLVIPNFHFHSVWRDPSKFSDIYDEEFFVKTLENDVRVV
                     NAIPGYLMDRFDRNMSNVFNFKIKAWAPIRYYKDTVLPRLLEEKVIRISPFANRLSFD
                     APPTVQRLRCLTNYEALRFSRPILTMGETLVARMKERSANNGGKYISVHLRFEEDMVA
                     FSCCVYDGGRREIEDMIAARERGWKGKFTKPGRVLQPGVNRINGKCPLTPLEVGLMLR
                     GMGFDRSTSIYLASGQIYNSERYMAPLLEMFPLLQTKEMLASAEELVSYKNYSSRMAA
                     IDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLFNGHAKTIRPDKRKLALYFDNPNIGWR
                     TFKRHMLGMRSHSDSKGIELKRPNDSIYSFPCPNCMCRANKTEGSKP"
     misc_feature    617..1630
                     /gene="LOC139840002"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; Region: O-FucT_plant; cd11299"
                     /db_xref="CDD:211385"
     misc_feature    order(641..652,1139..1141,1145..1147,1379..1387,
                     1511..1513,1568..1576)
                     /gene="LOC139840002"
                     /note="GDP-Fucose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:211385"
ORIGIN      
        1 taaattaatt aaaacaacaa acctcacttc tctatatgca tatataaatt aattaattta
       61 acaaaaataa atatacatat aaatatagtc tccggcgaat tagggcgaag gggaacgccg
      121 ttaattcaaa ttccccaacc ctaacatgta ataaatctgc taaataatgc acgctaatat
      181 tcgtatccca gccaccggaa ccaacagccc ttcaccgcca gcaacacctc tccgttctcc
      241 acgtcaccgt cacagccgta gtgcatttaa aacctccggt cgaatcactc accgttcttt
      301 ttctcaacgt tttgcttgga tcattatctc ctttctcgtt cgccgtcaag gcgccttact
      361 attagtacct ctactttact ttattactat gctttattat catccggata ctgacgtcac
      421 ttacgatgga attagacctc cattcgcgat tggatcagtt taccggagtc ctgagctgta
      481 tgctaagctc cggcatgata tggatgctga taattccact gctgacgcga tgtcgaccgt
      541 atggaaacga gctaaaggtg cagattggaa gccttgtata gataagtctt cagcaggctt
      601 accggactct aatgggtata tatatgttga agcaaacggt gggttaaatc agcagaggac
      661 atcgatatgt aatgcagttg ctgtggcggg ataccttaat gcaacattgg tgattcctaa
      721 ttttcatttt cacagtgtct ggagagatcc tagtaagttc agtgacatat atgatgaaga
      781 gttttttgtt aaaacattgg aaaatgatgt acgtgtggtc aacgcaatac ctggatattt
      841 aatggatcgg tttgatcgca atatgtctaa tgtattcaat tttaaaataa aagcatgggc
      901 acctattcgg tactataagg atacagttct tcctagacta cttgaagaaa aggtaataag
      961 gatttctcca tttgcaaatc gattatcgtt tgatgcccca cctaccgttc agcgtcttcg
     1021 ttgcttgaca aattatgaag ctttacggtt ttcaaggcct atattaacca tgggtgaaac
     1081 attagttgct agaatgaaag agcgcagtgc aaataacggt ggcaagtaca tatctgtgca
     1141 tttaaggttt gaagaggaca tggttgcttt ctcttgttgt gtatatgatg gcggaagaag
     1201 agagattgaa gatatgatag ctgcaagaga aagaggttgg aaaggtaaat ttacaaaacc
     1261 tggtagagtc cttcagcctg gagtcaatcg gatcaatggc aaatgccccc tcacacctct
     1321 agaggttggg ttgatgctca gaggaatggg attcgataga agtacgtcta tctatcttgc
     1381 atctggacaa atatacaatt ccgagagata tatggctcct ctactagaaa tgtttcctct
     1441 tttacaaacc aaggaaatgt tggcatctgc tgaagaactt gtctcgtaca agaactattc
     1501 ttccaggatg gctgcgatag actacaccgt atgcctacac agtgaagtat ttgtgacaac
     1561 tcagggtgga aactttccac attttctact cggtcatcga agatacctct tcaatggaca
     1621 cgccaagaca attagacccg ataagcgcaa gttagctttg tattttgaca atcctaatat
     1681 cggttggaga acgttcaaaa ggcacatgtt aggtatgaga tctcatagtg attcaaaagg
     1741 aatcgagtta aaacggccaa atgactcgat atattcgttc ccatgtccaa actgtatgtg
     1801 ccgtgcaaat aaaaccgaag gttcaaaacc atgattttca agttaaccac aattcaaatc
     1861 acattttggg gccaactcct tttttgatta aaaattattt cgtttttttt ctttctccct
     1921 ctgtcactca gaaagagggc ttacattaca tgattagaat ttggaatttt aaagttaaaa
     1981 cagatggaag tattgtttcc agaacaaccg tcgatcggtt tgtacatgat tcgaggaaaa
     2041 aggtgattct tttgttggag ttttatacag tgtcatcatc ttcatgcacc ttctgtattt
     2101 aacaagttgc agtgaagctg attttcaata gttggtaggt tgtatattac acccgacttg
     2161 gttcggtcac atttgagata ataggaacat gtaattgtaa acagatttga tcagtttcac
     2221 agattttcat agtctttgta tgttcaatct tatgatagat tttgttacag atacaatttt
     2281 ttattttttt aattactttt cttgaa
//
LOCUS       XM_071830222            2615 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin efflux carrier
            component 4-like (LOC139840003), mRNA.
ACCESSION   XM_071830222
VERSION     XM_071830222.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2615
                     /gene="LOC139840003"
                     /note="auxin efflux carrier component 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 39 Proteins"
                     /db_xref="GeneID:139840003"
     CDS             236..2158
                     /gene="LOC139840003"
                     /codon_start=1
                     /product="auxin efflux carrier component 4-like"
                     /protein_id="XP_071686323.1"
                     /db_xref="GeneID:139840003"
                     /translation="MITGHDFYTVMSAMVPLYVAMILAYGSVRWWKIFTPDQCSGINR
                     FVAIFAVPLLSFHFISMNDPYNMNFRFIAADTLQKIIMLVVLALWANFTKNGSLEWMI
                     TIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLL
                     IMEQFPETAASIVSFKVESDVVSLDGHDFLETDAEIGTDGKLHVTVRKSNASRRSLGL
                     GSVTGMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHSDFYSMMGFPGGRLSNFGPADN
                     TYSVQSSRGPTPRPSNFEESTAPGPLNMNPPRFGFYPAAQTVPANYPAPNPDIASTVG
                     KGNKSQQSTQAQQNGVQNNKGNNHDAKELHMFVWSSSASPVSEGGGAGGGLHVFGANE
                     FGTTNEQTGQPEQQSAKEIRMMVSSDQNVETKDTREDFSFGGDEENDKEGQIGLNKLG
                     SSSTSELHPKGGPVEEGVTGKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSL
                     VAFRWHLAMPIIISKSISILSDAGLGMAMFSLGLFMALQPKIIACGNQVASFAMAVRF
                     LTGPAVMAAASIAVGLRGTLLHIAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGM
                     LIALPITLVYYIILGL"
     misc_feature    260..>805
                     /gene="LOC139840003"
                     /note="Membrane transport protein; Region: Mem_trans;
                     pfam03547"
                     /db_xref="CDD:308904"
     misc_feature    <824..1294
                     /gene="LOC139840003"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); Region: Herpes_BLLF1; pfam05109"
                     /db_xref="CDD:282904"
     misc_feature    <1670..2152
                     /gene="LOC139840003"
                     /note="Membrane transport protein; Region: Mem_trans;
                     cl22894"
                     /db_xref="CDD:451441"
ORIGIN      
        1 ttatttccac ccggttcgta cttatttctc tgtcaccggt tcgtacttac ttatctgtta
       61 ccggttcaat cagccgtaaa tcgcacacac tttcagtaac caaatctatc tgtcagttat
      121 ttagataacg gattttcact ttcccatttt acccttccca aattctcctt tattaataat
      181 caccctcatc ttcatccttc atccaccaca ctcaacttca cctccacttg caacaatgat
      241 caccggccat gacttctaca ccgtcatgtc cgccatggtc cctttatacg tcgccatgat
      301 tctcgcttac ggcagcgtac gctggtggaa aattttcact cccgatcaat gctccggcat
      361 caaccgtttc gttgccattt tcgccgttcc tttactttct ttccatttca tctccatgaa
      421 cgatccttat aacatgaatt tccgttttat cgccgctgat actcttcaga aaatcatcat
      481 gctcgttgta ctcgccttat gggctaactt cactaaaaac gggagtttgg aatggatgat
      541 aaccatattt tcgttatcca cgttaccaaa cacgctagta atggggattc cgttactaat
      601 tgcgatgtac ggtgaatatt ccgggtcatt aatggttcaa gtagtggtgt tacagtgtat
      661 tatctggtac actttactac tatttttatt cgagtaccgt ggtgcaaaat tgctaataat
      721 ggagcagttt ccagaaaccg ctgcttcaat tgtatcattc aaagttgaat ccgacgtcgt
      781 ttcactcgac ggtcacgatt tcctagaaac cgatgctgaa atcggcaccg atgggaagtt
      841 acacgtcacc gtaagaaaat caaatgcgtc tcggagatct ttagggctcg gttcggtcac
      901 cggaatgaca ccgcgccctt cgaatctcac cggagctgag atttatagtc tgagctcttc
      961 acggaatccg acaccgagag ggtctaattt caaccactcg gatttttact ccatgatggg
     1021 gtttccgggt ggtcggttat cgaattttgg accggcggat aatacttatt ccgtacagtc
     1081 gtcgcgaggg ccgactccac ggccgtcgaa ttttgaagag agtacggcgc cggggccgtt
     1141 gaatatgaat cctccgaggt ttggatttta tccagctgct cagacagtgc cggcgaatta
     1201 tccggcgcca aatccggata ttgcatcgac ggttggtaaa ggtaataaaa gtcaacagtc
     1261 aacgcaagcg caacagaatg gtgtgcaaaa taataaaggg aataaccatg acgctaaaga
     1321 gcttcacatg tttgtgtgga gttcaagtgc ttcaccggtt tcagaaggcg gtggtgctgg
     1381 tggtgggctc cacgtgtttg gcgctaatga attcggaact actaatgaac aaacgggtca
     1441 acccgaacaa caaagtgcta aagaaattag aatgatggtc tcctcagatc aaaatgttga
     1501 aactaaagac acgagggaag attttagttt cggtggagat gaagagaatg acaaagaagg
     1561 ccaaataggg ttgaataaac tgggatctag ttcaacgtcg gagctccacc ctaaaggtgg
     1621 tccggttgag gagggtgtga ccggtaaaca gatgccgccg gcgagtgtga tgactcgact
     1681 gattttgatt atggtttgga ggaaattaat taggaatcca aatacttact caagtctcat
     1741 cggtttaatt tggtctcttg tggccttcag gtggcatttg gctatgccaa taataatttc
     1801 aaagtctatc tctatacttt cggatgctgg tcttggaatg gctatgttta gcttgggttt
     1861 gtttatggcg cttcaaccta agataattgc ttgtggaaat caagtcgctt catttgcaat
     1921 ggcggtaagg tttctaaccg gaccggcagt gatggcagca gcttcaatag ctgtcggtct
     1981 tcgtggtacc ctcctacata tcgcaatcgt acaggctgca ttgccgcaag ggatcgtacc
     2041 ttttgttttt gcaaaggagt acaacgttca ccctgcaatt cttagtactg gggttatatt
     2101 tgggatgttg attgcgttac cgataacttt agtgtactac ataatattgg ggttgtgatt
     2161 gtggtgaaga acaagacatg ttttgaagag aaaatgagag tccaagatga attggaaaat
     2221 gcaatatttg agtcctcttc cttgatgtga ggatcatgct ccttccatct accaatgttt
     2281 gtttctatct ataaatatga tgatttagat tttcaattca agaaatatat gaggaaagca
     2341 aggacgaaga ttttagaaca agagaaacaa acaagatttt attttctttt ttactatttt
     2401 ttcttctttt ggaaacaaga actcctagtc ctagtcctag catcgttgac aagggaatta
     2461 tgctttctaa tcgatttcgg tggttgcttt tgttggctac tcagtgttgt ttgttcgtcg
     2521 tatgtgcatt aactgtgtaa ttatttaatg attttaatta ttatttttga tgtaaacttc
     2581 atttttaaaa taaacaagta tataactata aaaaa
//
LOCUS       XM_071830223            1475 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides COP9 signalosome complex
            subunit 4-like (LOC139840004), transcript variant X1, mRNA.
ACCESSION   XM_071830223
VERSION     XM_071830223.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1475
                     /gene="LOC139840004"
                     /note="COP9 signalosome complex subunit 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840004"
     CDS             96..1289
                     /gene="LOC139840004"
                     /codon_start=1
                     /product="COP9 signalosome complex subunit 4-like isoform
                     X1"
                     /protein_id="XP_071686324.1"
                     /db_xref="GeneID:139840004"
                     /translation="METAFASASAIGDQRQKIEEYKHILSTVIASNDVVQAKKFIDHI
                     LSDDVPLVVSRQLLQTVAQELGRLEPENQKEIAHYTLHQIQPRVVSFEEQVLVIREKL
                     AELYESEQLWSKAAQMLSGIDLDSSMRVIDDKFKLSKCVQIARLYLEDDDAVNAEAFI
                     NKASFMVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEVIDE
                     EALEQALAAAVTCTILAAAGPQRSRVLATLYKDERCSRLKIYPILQKVYLERILRKAE
                     IDAFSEELKEHQKALLPDNVTVLDRAMVEHNLLSASKLYTNISFDELGTLLGIASQKA
                     EKIASRMICEDRMRGSIDQVEAVIHFEDDNGELQQWDQQIFGLCQALNDVLDSMAKKG
                     LAIPV"
     misc_feature    <264..1211
                     /gene="LOC139840004"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: RPN5; COG5071"
                     /db_xref="CDD:227403"
     misc_feature    882..1181
                     /gene="LOC139840004"
                     /note="PCI domain; Region: PCI; pfam01399"
                     /db_xref="CDD:460195"
ORIGIN      
        1 ttttatcgag tgtgttttaa gctccaaaac ccgtttcagt cctgtacaaa tttctagggt
       61 tacataactt caccaactct atacaaacaa atcaaatgga gactgcattc gcaagcgctt
      121 ctgcaatcgg cgatcagcgt caaaaaatcg aagaatacaa acacattctt tcaaccgtaa
      181 tcgcttcaaa cgatgtcgtt caagccaaaa aattcattga ccacattctt tcggatgatg
      241 ttccgttagt agtatcacgg cagttgttac aaacagtcgc acaagagtta ggtagattgg
      301 aacctgagaa tcaaaaggag attgctcact atacacttca tcagattcag cctcgtgttg
      361 tatcgtttga agaacaggtt cttgtcatcc gtgagaagct tgcagagctg tatgagtcgg
      421 aacagttatg gtcaaaagca gcacaaatgc tcagtgggat tgatctcgac tcttcaatga
      481 gggtgattga tgacaagttc aagttgtcaa aatgcgtgca aattgcccga ctataccttg
      541 aggatgatga tgccgtgaat gctgaggctt tcatcaacaa agcttcattt atggttagca
      601 acagtcagca tgaagtattg aatttacagt acaaggtttg ttatgcaagg atactagatt
      661 taaaaaggaa gttcttggaa gctgctcttc gctattatga tatttcacaa attgagaagc
      721 gacaaatagg agatgaagtg attgatgaag aagcactaga acaggcccta gctgccgctg
      781 tgacttgcac aattttggct gctgcaggtc ctcagcgttc tcgtgttctt gcaaccttgt
      841 ataaagatga acgatgttca aggttgaaga tttaccccat cttgcaaaag gtgtacttag
      901 agagaatctt gaggaaagct gagatagatg cattctctga agaactgaaa gagcatcaga
      961 aagcactttt accggacaat gttactgtgc ttgatcgtgc aatggttgag cataacctct
     1021 tgagtgcaag caaactgtat acaaacataa gcttcgatga gttgggcaca ctactgggca
     1081 ttgcatctca aaaggcagaa aagattgcat caagaatgat ttgtgaagat agaatgaggg
     1141 gctctattga tcaggtagaa gcagttattc atttcgagga tgataatgga gagctccagc
     1201 aatgggatca acagattttt ggactttgtc aagctttgaa tgacgttctt gatagcatgg
     1261 caaagaaggg gttagcgatt cctgtataac taactcatca aacttagtta atctgtaagg
     1321 ctcgccgcgt tttgtaatta gtacttctca atattttgaa gaaccatgat cagtctgaat
     1381 ataggtggca cttgtatgaa tatcatacca actagtattc ggcatttttt ttacctttat
     1441 tggtatactt ttcttgataa attgctctag gttaa
//
LOCUS       XM_071830224            1451 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides COP9 signalosome complex
            subunit 4-like (LOC139840004), transcript variant X2, mRNA.
ACCESSION   XM_071830224
VERSION     XM_071830224.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1451
                     /gene="LOC139840004"
                     /note="COP9 signalosome complex subunit 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840004"
     CDS             96..1265
                     /gene="LOC139840004"
                     /codon_start=1
                     /product="COP9 signalosome complex subunit 4-like isoform
                     X2"
                     /protein_id="XP_071686325.1"
                     /db_xref="GeneID:139840004"
                     /translation="METAFASASAIGDQRQKIEEYKHILSTVIASNDVVQAKKFIDHI
                     VSRQLLQTVAQELGRLEPENQKEIAHYTLHQIQPRVVSFEEQVLVIREKLAELYESEQ
                     LWSKAAQMLSGIDLDSSMRVIDDKFKLSKCVQIARLYLEDDDAVNAEAFINKASFMVS
                     NSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEVIDEEALEQALA
                     AAVTCTILAAAGPQRSRVLATLYKDERCSRLKIYPILQKVYLERILRKAEIDAFSEEL
                     KEHQKALLPDNVTVLDRAMVEHNLLSASKLYTNISFDELGTLLGIASQKAEKIASRMI
                     CEDRMRGSIDQVEAVIHFEDDNGELQQWDQQIFGLCQALNDVLDSMAKKGLAIPV"
     misc_feature    <240..1187
                     /gene="LOC139840004"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: RPN5; COG5071"
                     /db_xref="CDD:227403"
     misc_feature    858..1157
                     /gene="LOC139840004"
                     /note="PCI domain; Region: PCI; pfam01399"
                     /db_xref="CDD:460195"
ORIGIN      
        1 ttttatcgag tgtgttttaa gctccaaaac ccgtttcagt cctgtacaaa tttctagggt
       61 tacataactt caccaactct atacaaacaa atcaaatgga gactgcattc gcaagcgctt
      121 ctgcaatcgg cgatcagcgt caaaaaatcg aagaatacaa acacattctt tcaaccgtaa
      181 tcgcttcaaa cgatgtcgtt caagccaaaa aattcattga ccacatagta tcacggcagt
      241 tgttacaaac agtcgcacaa gagttaggta gattggaacc tgagaatcaa aaggagattg
      301 ctcactatac acttcatcag attcagcctc gtgttgtatc gtttgaagaa caggttcttg
      361 tcatccgtga gaagcttgca gagctgtatg agtcggaaca gttatggtca aaagcagcac
      421 aaatgctcag tgggattgat ctcgactctt caatgagggt gattgatgac aagttcaagt
      481 tgtcaaaatg cgtgcaaatt gcccgactat accttgagga tgatgatgcc gtgaatgctg
      541 aggctttcat caacaaagct tcatttatgg ttagcaacag tcagcatgaa gtattgaatt
      601 tacagtacaa ggtttgttat gcaaggatac tagatttaaa aaggaagttc ttggaagctg
      661 ctcttcgcta ttatgatatt tcacaaattg agaagcgaca aataggagat gaagtgattg
      721 atgaagaagc actagaacag gccctagctg ccgctgtgac ttgcacaatt ttggctgctg
      781 caggtcctca gcgttctcgt gttcttgcaa ccttgtataa agatgaacga tgttcaaggt
      841 tgaagattta ccccatcttg caaaaggtgt acttagagag aatcttgagg aaagctgaga
      901 tagatgcatt ctctgaagaa ctgaaagagc atcagaaagc acttttaccg gacaatgtta
      961 ctgtgcttga tcgtgcaatg gttgagcata acctcttgag tgcaagcaaa ctgtatacaa
     1021 acataagctt cgatgagttg ggcacactac tgggcattgc atctcaaaag gcagaaaaga
     1081 ttgcatcaag aatgatttgt gaagatagaa tgaggggctc tattgatcag gtagaagcag
     1141 ttattcattt cgaggatgat aatggagagc tccagcaatg ggatcaacag atttttggac
     1201 tttgtcaagc tttgaatgac gttcttgata gcatggcaaa gaaggggtta gcgattcctg
     1261 tataactaac tcatcaaact tagttaatct gtaaggctcg ccgcgttttg taattagtac
     1321 ttctcaatat tttgaagaac catgatcagt ctgaatatag gtggcacttg tatgaatatc
     1381 ataccaacta gtattcggca ttttttttac ctttattggt atacttttct tgataaattg
     1441 ctctaggtta a
//
LOCUS       XM_071830225            1448 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides COP9 signalosome complex
            subunit 4-like (LOC139840004), transcript variant X3, mRNA.
ACCESSION   XM_071830225
VERSION     XM_071830225.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1448
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1448
                     /gene="LOC139840004"
                     /note="COP9 signalosome complex subunit 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840004"
     CDS             96..1262
                     /gene="LOC139840004"
                     /codon_start=1
                     /product="COP9 signalosome complex subunit 4-like isoform
                     X3"
                     /protein_id="XP_071686326.1"
                     /db_xref="GeneID:139840004"
                     /translation="METAFASASAIGDQRQKIEEYKHILSTVIASNDVVQAKKFIDHI
                     SRQLLQTVAQELGRLEPENQKEIAHYTLHQIQPRVVSFEEQVLVIREKLAELYESEQL
                     WSKAAQMLSGIDLDSSMRVIDDKFKLSKCVQIARLYLEDDDAVNAEAFINKASFMVSN
                     SQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEVIDEEALEQALAA
                     AVTCTILAAAGPQRSRVLATLYKDERCSRLKIYPILQKVYLERILRKAEIDAFSEELK
                     EHQKALLPDNVTVLDRAMVEHNLLSASKLYTNISFDELGTLLGIASQKAEKIASRMIC
                     EDRMRGSIDQVEAVIHFEDDNGELQQWDQQIFGLCQALNDVLDSMAKKGLAIPV"
     misc_feature    <237..1184
                     /gene="LOC139840004"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: RPN5; COG5071"
                     /db_xref="CDD:227403"
     misc_feature    855..1154
                     /gene="LOC139840004"
                     /note="PCI domain; Region: PCI; pfam01399"
                     /db_xref="CDD:460195"
ORIGIN      
        1 ttttatcgag tgtgttttaa gctccaaaac ccgtttcagt cctgtacaaa tttctagggt
       61 tacataactt caccaactct atacaaacaa atcaaatgga gactgcattc gcaagcgctt
      121 ctgcaatcgg cgatcagcgt caaaaaatcg aagaatacaa acacattctt tcaaccgtaa
      181 tcgcttcaaa cgatgtcgtt caagccaaaa aattcattga ccacatatca cggcagttgt
      241 tacaaacagt cgcacaagag ttaggtagat tggaacctga gaatcaaaag gagattgctc
      301 actatacact tcatcagatt cagcctcgtg ttgtatcgtt tgaagaacag gttcttgtca
      361 tccgtgagaa gcttgcagag ctgtatgagt cggaacagtt atggtcaaaa gcagcacaaa
      421 tgctcagtgg gattgatctc gactcttcaa tgagggtgat tgatgacaag ttcaagttgt
      481 caaaatgcgt gcaaattgcc cgactatacc ttgaggatga tgatgccgtg aatgctgagg
      541 ctttcatcaa caaagcttca tttatggtta gcaacagtca gcatgaagta ttgaatttac
      601 agtacaaggt ttgttatgca aggatactag atttaaaaag gaagttcttg gaagctgctc
      661 ttcgctatta tgatatttca caaattgaga agcgacaaat aggagatgaa gtgattgatg
      721 aagaagcact agaacaggcc ctagctgccg ctgtgacttg cacaattttg gctgctgcag
      781 gtcctcagcg ttctcgtgtt cttgcaacct tgtataaaga tgaacgatgt tcaaggttga
      841 agatttaccc catcttgcaa aaggtgtact tagagagaat cttgaggaaa gctgagatag
      901 atgcattctc tgaagaactg aaagagcatc agaaagcact tttaccggac aatgttactg
      961 tgcttgatcg tgcaatggtt gagcataacc tcttgagtgc aagcaaactg tatacaaaca
     1021 taagcttcga tgagttgggc acactactgg gcattgcatc tcaaaaggca gaaaagattg
     1081 catcaagaat gatttgtgaa gatagaatga ggggctctat tgatcaggta gaagcagtta
     1141 ttcatttcga ggatgataat ggagagctcc agcaatggga tcaacagatt tttggacttt
     1201 gtcaagcttt gaatgacgtt cttgatagca tggcaaagaa ggggttagcg attcctgtat
     1261 aactaactca tcaaacttag ttaatctgta aggctcgccg cgttttgtaa ttagtacttc
     1321 tcaatatttt gaagaaccat gatcagtctg aatataggtg gcacttgtat gaatatcata
     1381 ccaactagta ttcggcattt tttttacctt tattggtata cttttcttga taaattgctc
     1441 taggttaa
//
LOCUS       XM_071830226            1469 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BAG family molecular
            chaperone regulator 2-like (LOC139840005), mRNA.
ACCESSION   XM_071830226
VERSION     XM_071830226.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1469
                     /gene="LOC139840005"
                     /note="BAG family molecular chaperone regulator 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 Proteins"
                     /db_xref="GeneID:139840005"
     CDS             295..1281
                     /gene="LOC139840005"
                     /codon_start=1
                     /product="BAG family molecular chaperone regulator 2-like"
                     /protein_id="XP_071686327.1"
                     /db_xref="GeneID:139840005"
                     /translation="MMRMRTKTTELTSIKGVKDGELEVRPGGMLVQKRDPDHPQNRIP
                     PPTIRVRVKHGSVYHEIIIKATATFGELKKMLSGPTGLHHEDQKVIHKDKERASKTFL
                     DVVGVKDKSKMVVIEDLISQEKRLLEARKNAKLEKIVKLVSEIGHEVDRLADQVVAVE
                     SIISKGGKVAEKMISNLIELLMNQLLKLDEIKIDGDVNLQKQKQVEKVRKYVETLDVL
                     KVKNTTTNHVSKPTQSHTNGLGGAASQPPHNNHHHQQFRRSVEKFSPTPHQQQSQRGE
                     LSKNISGGVVVTTQWETFDSLPTIFPTPQSTSTSTTSETTIHSNFNWDLLLK"
     misc_feature    433..642
                     /gene="LOC139840005"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
     misc_feature    718..948
                     /gene="LOC139840005"
                     /note="BAG domain; Region: BAG; pfam02179"
                     /db_xref="CDD:460475"
ORIGIN      
        1 acgggtatta ctacaattta attcccatct tcattgtttt cttcactaca agaatcaaaa
       61 acctctttta caagtttttg tgtctctaac aaacatccaa tattcctttc tttcacaacc
      121 agttaaagct gatagttttc ttgttttttt ttttaacctt atttgttaca aatgatttat
      181 gacgtcatta atacacatgg ctgcaaagtc aatggtttga tctgagttat tattattatc
      241 gtctgtatat ataataataa taattcttat catacacgaa actaaaaatt gaagatgatg
      301 cgtatgagga ctaaaactac agagttgact tctataaaag gagtcaaaga tggcgaattg
      361 gaggtccgac ccggtggaat gctggttcag aaacgagacc cggaccaccc acaaaaccgt
      421 attcctccgc ccactatacg cgttcgtgtt aaacatggct ccgtttatca cgaaatcatc
      481 attaaagcta ctgctacatt tggagaatta aagaaaatgt taagtgggcc aacagggtta
      541 caccatgaag atcaaaaggt gattcacaag gacaaagaaa gggcatcaaa gacatttctt
      601 gatgttgttg gtgtgaaaga taaatcaaaa atggttgtta tagaagactt aattagtcaa
      661 gaaaaaaggc ttttagaagc tagaaaaaat gctaaattgg aaaaaattgt taaattggta
      721 tctgaaattg gtcacgaggt tgatagactt gctgatcagg tggtggcggt tgaatcaatt
      781 atttctaaag gaggaaaagt agcagagaag atgatttcga atttgatcga gttattgatg
      841 aatcaattgc ttaaactaga cgaaattaaa atcgatggag atgtaaatct tcagaagcaa
      901 aaacaggtag aaaaggtgcg gaaatacgtt gaaacccttg acgttttaaa agttaaaaac
      961 acgacaacta atcatgtttc gaagcctaca caatcacata ccaacgggct tggtggtgcg
     1021 gcctcacaac cgccacacaa caaccaccac caccagcagt ttagacggtc agttgagaaa
     1081 ttttcaccga cgccacatca acaacaatca caacggggag agttaagtaa gaacatatca
     1141 gggggagttg tggtaaccac acaatgggag actttcgatt ccttgccgac aatatttccg
     1201 accccacaat caacatcaac atcaaccacc agtgaaacaa caattcactc caactttaat
     1261 tgggatttgc tgttaaagta gacttgaaat gtcggtttca aatgtgtgta tgtgtgtgga
     1321 ttcagctgtg tgttttttgt atttttcttc ctagttggtt acctctctct ccattctttc
     1381 atgtaactag agtacatttg ttagcaattt cttctttttg tgggtgccat tttctcctta
     1441 aataaaacat aaatcaaata tgttacata
//
LOCUS       XM_071830227            1470 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840006), mRNA.
ACCESSION   XM_071830227
VERSION     XM_071830227.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1470
                     /gene="LOC139840006"
                     /note="uncharacterized LOC139840006; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840006"
     CDS             1..1215
                     /gene="LOC139840006"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686328.1"
                     /db_xref="GeneID:139840006"
                     /translation="MDDVFEEETEQTVSLNEYLDEVEHQELEADLVLGGDEGKECTYV
                     KGYMKRQAIFSCLTCTPDGNAGVCTACSLTCHDGHEIVELWTKRNFKCDCGNSKFGAF
                     YCKLMPSKDIENEDNSYNHNFKGKYCTCSYQYPDPDVEEQVEMIQCCICEDWFHEEHL
                     GLESTKEIQIPIDENGEPLFEDLICHMCSSICSFLHLYPQTIFAPHKQPNTPTTSKEK
                     GVEAAPSGSGSSTMPENGTSVVHNADSAVHDPNFKNVDDDKSIPVGEKSDKCLLGVDL
                     LTTELTFGKSQPMFLTKNWREALCGCENCLGFYTKNGISFLLSKEDSIAEYENLAKQK
                     RDEKLQQQDGAEMSFLSNLGHVEKMEILSGIADMKDEICTFLQSFDASKPITSDDIRQ
                     VFDNLKKRRRMD"
     misc_feature    118..324
                     /gene="LOC139840006"
                     /note="UBR-box found in RING-type E3 ubiquitin-protein
                     ligase UBR7 and similar proteins; Region: UBR-box_UBR7;
                     cd19677"
                     /db_xref="CDD:439075"
     misc_feature    order(166..168,175..177,202..204,211..213,223..228,
                     235..237,274..276,280..282,310..312)
                     /gene="LOC139840006"
                     /note="putative Zn binding site [ion binding]; other site"
                     /db_xref="CDD:439075"
     misc_feature    379..564
                     /gene="LOC139840006"
                     /note="PHD finger found in putative E3 ubiquitin-protein
                     ligase UBR7; Region: PHD_UBR7; cd15542"
                     /db_xref="CDD:277017"
     misc_feature    order(379..381,430..444,454..456,547..549)
                     /gene="LOC139840006"
                     /note="putative histone H3 binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:277017"
ORIGIN      
        1 atggatgatg tgtttgaaga agaaactgag caaacggtct cactgaatga gtatctcgat
       61 gaagttgaac atcaggaact tgaagcggat ctggttttgg gtggtgatga gggaaaggaa
      121 tgcacctatg tcaaaggtta tatgaagagg caagcaattt tctcgtgctt aacatgcact
      181 ccagatggaa atgctggtgt ttgcaccgca tgtagtttga cttgtcatga tggacatgag
      241 attgtagaac tttggaccaa gagaaatttc aagtgtgatt gtggcaattc aaaatttgga
      301 gcattctact gcaaacttat gccaagcaaa gatatcgaaa atgaagacaa ctcttacaac
      361 cataatttta aggggaaata ttgtacttgt agctatcaat atcctgatcc agatgttgag
      421 gagcaagtag agatgattca gtgttgcatt tgtgaagatt ggtttcacga ggagcatctt
      481 ggccttgagt ctaccaagga gatacagatc ccaatagacg aaaatggcga acctctgttt
      541 gaagatctta tctgccacat gtgctcgtct atttgctctt ttctgcacct gtaccctcaa
      601 accatatttg cgccacataa gcaaccaaat actcctacta cttctaaaga aaaaggcgtg
      661 gaggctgcac cttcgggttc tggatcctct acaatgcctg aaaatggtac ttcggtggtt
      721 cataatgcag actctgcagt acacgatcct aactttaaaa atgtagatga tgataagagt
      781 attccagttg gagaaaaatc tgataaatgt cttcttggtg ttgatctctt gaccactgaa
      841 ttgacctttg gaaaaagtca accaatgttt cttacaaaga attggagaga ggcactctgt
      901 gggtgtgaaa attgtttggg attttacacc aagaacggaa tcagtttctt gcttagtaag
      961 gaggattcga ttgcggagta cgagaatctg gcgaagcaaa agcgggatga aaaattgcag
     1021 cagcaagatg gggcagaaat gtcttttctt agtaatctag ggcatgtgga gaagatggaa
     1081 atactatcag gcattgccga catgaaagac gagatctgta ctttcctgca atccttcgat
     1141 gcatcaaaac caatcacatc tgatgatatc cgccaagtat ttgataatct taagaagcgt
     1201 cgacgaatgg actgatttgt aaagaaccaa aagcttttgt taccaactct ttcgaaagaa
     1261 tggctctggt ctgtagttta taggtttatt aatttgcaag taacttttat cttttccttt
     1321 aagttaggaa ctgtactaaa tcttggttca gacatgttat gcttgttttc agttccatga
     1381 ctcatcaagt ttgacttaca ctttgtggtt tccacttgat tgcctatcaa tatgtatatg
     1441 accatctgca acatattcat ttagacgttt
//
LOCUS       XR_011757182            1969 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840007), ncRNA.
ACCESSION   XR_011757182
VERSION     XR_011757182.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1969
                     /gene="LOC139840007"
                     /note="uncharacterized LOC139840007; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840007"
     ncRNA           1..1969
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840007"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840007"
ORIGIN      
        1 aggcacctaa ttgatcttaa gatcacaatg aacgatcggc gattgaataa agatgtgatt
       61 tctttttcta tagattcaat cgaggtgtta ttcaaaatat taatcgattt cgcagtcgat
      121 tgaataaaga tgacagctat gcgaatcaaa aggtttataa tttctaatcg gttgccctgt
      181 taaatctctg gtatcgttag gttgtacttt gagaagtcga tgtcattctc gggggatctc
      241 ataacaatgt ccaggagaaa tacaaaactc tttgtggtga ccatagtgca agtatggtgc
      301 gaattattaa gctccttgta agaaaacgct acagcatttg cacgacaaag ttatgagtcc
      361 gtgttgagaa agcgacgaga tgagatttcc caacgtgacg ataccgttgt aaacgttgta
      421 aatagtttgg gtttgatgat acttatggtg cgttaatagg aattctcatt ttttggactt
      481 agaagctggt gagatgattg gagggcgact gattatctcc atcagataag gctgagaggt
      541 cattagctga agcagcttcg tatggatccc aattagctgt ctttacagaa gcgtttgtgg
      601 gtggaagcgt ttgtgggtgg atatcctcgt gagtcagatt ttggtgtgac aatcggtagc
      661 cgttcactta agggtaaaga agatttccgc aagtaccatg ctgcagacat taatgtacct
      721 agtaatataa aattttgcat tttagttata aagaacgtat cgacaaggaa tttaaataat
      781 ttgttttgtt gatgtgttct ctgagtgttt ttatgagtgc aatttgttgg gagaataaaa
      841 tgtctctact aaggacaaca atgtatgcta aaggaattga aatatatcgt gcactaacag
      901 ctgattcgag ggaagtttgg taagcatcaa tgacccatat tgcattggag ggtggatgct
      961 tagttttatc accaaaccag ttttatagac gtaacgattc tgctccccca aaatatgttt
     1021 ttaatggaca gacgatgatc ttacactcga atctgttgta tgtgctggtg acggtgtcat
     1081 tatttcacca tcatgggcag ttcttgcagg accaaattgt gacgttgaag cactcattac
     1141 atctgattga ggtacgcagg gttcatgggg ggtcaaaatg gtctggttgg gctgacccaa
     1201 acaaaataat gattcatgtg gtgaagtttc taagttacgg tttgtgaagc tgaagcacta
     1261 cttcatacaa atactcaagg ttgcaaaacc cgcaactcgg ggagcacttg gttgggactt
     1321 tggagggagt aatcgccaac tcagggatta taatagaaaa ttattgaaaa ttagtcatat
     1381 acttagataa gtttaatgaa cctgattagc aaggttttca aattctagag taaagttact
     1441 ctttaacgat aattaatatc ctaattttag tgtctttatt cacatctttc attttgtgat
     1501 tcacatacag ttttaagcat agaaaccaaa tccatatatg ggaggtcaat gggctcattt
     1561 gcattaagtt caggcatttt gtattaggta cgttatatag gttcattata tacatgggtt
     1621 gtacctggtg tcattggaac tcttgcaacg ggtgcaacat attgttttaa gcatagtaac
     1681 ataatccaaa tcttagaggt taatgagctc attttaatca tcaggtgact ttatattaga
     1741 cgaaggtgat gatagtagta tggttatcct gcatatttta tgtgttgtca acttatgcat
     1801 ttgctactaa gattaggcat tttatatgaa ttaaattttc aatttcaatt gcaacttagc
     1861 tggggtttgc agcaaagctc tataacaaaa gctttggtat tcatttacgt taatactcaa
     1921 tgatagggtt taagagcccc tgcgtttgaa atgatgttca tttacattg
//
LOCUS       XM_071830228            2209 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cation/calcium exchanger
            4-like (LOC139840008), mRNA.
ACCESSION   XM_071830228
VERSION     XM_071830228.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2209
                     /gene="LOC139840008"
                     /note="cation/calcium exchanger 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139840008"
     CDS             208..2097
                     /gene="LOC139840008"
                     /codon_start=1
                     /product="cation/calcium exchanger 4-like"
                     /protein_id="XP_071686329.1"
                     /db_xref="GeneID:139840008"
                     /translation="MHHLVHQLRKFINTVFALGLIALIYYQFDSFIELQAPNSEWNSR
                     GRSMIELNLNSSDNLSDPVDVSTVRSLDICTGLVVHFGYSSSCEFLKANPHCSSDGLF
                     NYLKFYYCDCDEGAFGAIVLVVWLVALFYLLGNTAADYFCVSLQNLSTLLKLSPTVAG
                     VTLLPLGNGAPDVFASIASFVGSNTGEVGLNSVLGGAVFVTCVVVGIVSLCVADRGVQ
                     IDKKAFIRDIGFYLFTLMFLLLILNVGKVSVVAAVAFVSIYVLYAVFVATNEIVRKHV
                     QSLKLDAVTPLLPLRVNMFSQGHQDDDPIRSSLLDVESEVVDDSQPRNSLPEWMWASN
                     VAIYSNQMKFQEHERHLWGWHDDAIEVDRPWFSFWSLCSLLEFPLTIPRKLTIPLVEE
                     ETWSKPYAVSSAFLSPLLLAFIWNTQDDLSSQSKIIVYIFGGLVGSTLCILAHMYTRP
                     DQPPRKFMFPWVLGGFLMSIVWFYLIANELVSLLVGFGVFLRVNPSILGLTVLAWGNS
                     MGDLVSNIALALDGGDGIQIALSGCYAGPMFNTLMGLGLSLLIGSWSQKPESYSVPQD
                     NSLYYTMGFLILGLLWALVILLRNDMRPNRILGTGLIALYLIFLSLRLMGALGFISLV
                     GLNKL"
     misc_feature    337..2085
                     /gene="LOC139840008"
                     /note="cation/calcium exchanger; Provisional; Region:
                     PLN03151"
                     /db_xref="CDD:215604"
ORIGIN      
        1 tgatatttgc tcaccaaacg ccggtacgca attcatttaa gctcttttct acaaaacata
       61 gtaagagtag atagattctt cttcttccaa ttgaaatcct tatttatatc gtcacctgta
      121 aaccctaatt cctctgttta aatcagggtt ggggtttcgg tcatctgatc tattttctat
      181 tacttaaact gtataattaa tactaatatg catcaccttg tgcatcaatt acgtaaattt
      241 atcaatactg tatttgccct aggtttaatt gcactaattt actaccaatt tgattcattt
      301 attgaattac aagctccaaa ttctgaatgg aactctagag gtaggtctat gattgaatta
      361 aatctgaatt cttctgataa tttatcggat ccagtagatg tatcaacggt tagaagtttg
      421 gatatttgta ctggattagt tgtccatttt ggttattcga gtagctgcga atttttaaaa
      481 gcgaatccgc attgctcttc tgatggactt ttcaattact tgaagtttta ttattgtgat
      541 tgtgatgaag gtgcatttgg tgctatagtt ttggttgttt ggcttgtggc gttgttttac
      601 cttttaggta atacagctgc tgattacttt tgtgtatcgt tgcaaaacct ttcaacttta
      661 ctgaaattat caccaactgt tgctggagtt actttacttc cgcttggtaa tggagctcct
      721 gatgtttttg caagtattgc atcttttgtg ggaagtaata cgggtgaggt tgggctcaac
      781 agtgttttag gtggtgcggt ttttgttaca tgtgttgttg ttgggattgt gtccctttgt
      841 gtagctgatc ggggagttca gattgataaa aaagcgttta ttagggacat tgggttctat
      901 ctgttcacgc tgatgtttct tttgctaatc cttaatgtcg gtaaagtgag tgtcgtggct
      961 gcagttgcgt ttgtgtctat atatgtgttg tatgcggttt ttgtggctac taatgaaatt
     1021 gtcaggaaac atgttcagag tttaaaacta gatgctgtta caccgttgct tccacttaga
     1081 gtgaacatgt tttctcaagg tcatcaagat gatgatccta tacgaagttc gttgcttgat
     1141 gttgaaagtg aagttgttga tgattcacaa cctcgtaatt ctttacccga atggatgtgg
     1201 gcttctaatg ttgctatata ttctaatcag atgaagtttc aagaacatga aagacattta
     1261 tggggatggc atgatgatgc tattgaggtt gataggccgt ggttctcatt ctggagtcta
     1321 tgttcgctac tagagttccc tttgactatt cctagaaagt tgactattcc attagttgag
     1381 gaggaaacat ggtcgaaacc atatgcagtt tcaagtgcgt tcttgtcacc acttcttcta
     1441 gcattcatat ggaacacaca agacgatttg agttctcaaa gtaagataat tgtgtacatt
     1501 tttggtgggt tggtcgggtc cacgctatgt atccttgctc atatgtacac tagaccagac
     1561 caaccacctc gcaagttcat gtttccatgg gttttaggtg gatttcttat gagtattgtt
     1621 tggttttatt tgattgcaaa tgagctcgtt tctttgttag taggatttgg tgtgtttcta
     1681 agagtgaatc cttcaattct tggattaacg gtattggctt ggggaaattc tatgggtgat
     1741 ttggtatcaa atattgcgct tgctttggac ggtggagatg gtatccagat tgcattatct
     1801 ggatgctatg caggtcccat gtttaataca ctcatgggtt tgggactatc attattaatt
     1861 ggatcgtggt cacaaaaacc ggagtcatac agtgttcctc aagacaacag cctttactac
     1921 acaatggggt ttctcatttt aggactttta tgggcacttg taatcttgtt aagaaacgac
     1981 atgcgtccta ataggatatt aggaacgggc cttattgctc tatacctgat ttttctatca
     2041 ttgcggttaa tgggtgcatt gggattcata tcattggttg gcctaaataa attataaccc
     2101 gaaagagatt gtaagtttat gttgatgttt tattggttgt ttgagctaaa atttctggtg
     2161 catagtcgat gtagattttt gcttaaaatg ttgaaagtta atataatga
//
LOCUS       XM_071830229            2286 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840009), mRNA.
ACCESSION   XM_071830229
VERSION     XM_071830229.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2286
                     /gene="LOC139840009"
                     /note="uncharacterized LOC139840009; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840009"
     CDS             148..2094
                     /gene="LOC139840009"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686330.1"
                     /db_xref="GeneID:139840009"
                     /translation="MNNSGSPEDMVPPVEGVAGGGTSYGWGDNSLQDPSLLRGTIDPT
                     RIPSSELVHVWCMPSTANVGPQEMPRPLESVSLLAARNERESIQIAIRPKVSWSGSSN
                     AGVVQIQCTDLCSTSGDMLVIGQSVTMRRVVPVLGVPDALVPLDMPVSQINLLPGETT
                     AIWVSIDVPSTLPPGQYDGEFIVTATKADAEYAAQSFGKSEKYQVYRELKNCLEVIEP
                     IEGKPAEEVVERVKSATTTLRRVLLSPSFSEFFSENGLPDMMDEDANLSIRLKLSLTV
                     WDFILPRTPSLPAVIGISDTVIEDRFGVEHGSAEWYDALEQHFKWLLQYKISPYFCKW
                     GNSMRVLTYTSPWPADHPKSDEFFSDPRLAAYAVPYSPVVSCGDLAKDYLQKEVEILR
                     SKSHWKKAYFYLWDEPLNVQQYDAIRHQASEIHVYAPDARVLTTYYSGPSDAPLAPNN
                     FEAFLKVPGFLRPHTQIYCTSEWVIGNREDLVKDIIAEIQTENNEEWWTYVCMGPSDP
                     HPNWHLGMRGTQHRAVMWRVWKEGGTGFLYWGANCYEKATVAGAEIKFRRGLPPGDGV
                     LFYPGEVFSSSHEPVASLRLERLLSGLQDIEYLKLYSSKYGRDEGLAILEKTGMYQGP
                     ERYTLDHNPIDIMRGEIFRTCRGS"
     misc_feature    1741..1950
                     /gene="LOC139840009"
                     /note="Domain of unknown function (DUF4091); Region:
                     DUF4091; pfam13320"
                     /db_xref="CDD:463843"
     polyA_site      2286
                     /gene="LOC139840009"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttatatttat aagagttatc aaaaatactg aaatagtagt agtgccattt ttctgttcaa
       61 tcgagacacg atcatcatcg tcatcatcat caccgtctcg actatcattc cgtgcactca
      121 tcttccaatt tttttcatat ttacaaaatg aacaactcag ggagtcctga agacatggtt
      181 cctccagttg aaggcgttgc aggtggcggg acctcatacg gatggggtga taatagctta
      241 caagatccaa gtctactgag agggacgatc gatcccactc gaattccgtc ttctgagtta
      301 gtacatgtat ggtgcatgcc tagcactgca aatgtgggac ctcaagaaat gcctcgacca
      361 ttggagtctg tatctctttt agctgcaaga aatgagaggg aaagcattca aattgctatt
      421 cgtcctaaag tttcttggag tggatcaagt aatgctgggg ttgtacagat tcaatgtact
      481 gatctgtgtt caacttctgg tgacatgtta gtaatcggtc agtcagttac tatgcgacgt
      541 gtggttcctg ttttgggtgt tccagatgct cttgtaccac ttgatatgcc tgtgtcacag
      601 ataaacctac ttccaggaga aactactgcc atttgggtat cgattgatgt tccaagtaca
      661 ctacccccag gacaatatga tggagaattt atagttactg cgacgaaagc agatgcagaa
      721 tatgctgcac aatcttttgg taaatctgag aaatatcaag tatataggga actcaaaaat
      781 tgtcttgaag tgattgagcc aattgaaggg aaaccagctg aagaagtggt agaaagagta
      841 aaatctgcaa ctacaacttt aagaagagta cttctttcgc cttctttttc tgaattcttt
      901 tctgaaaacg ggctgccaga tatgatggat gaagatgcaa acctttcaat acgtttgaag
      961 ctaagtttga ctgtctggga ctttattctc cccaggacac cttcacttcc tgctgttatt
     1021 ggcatatcag atactgtaat tgaagatcgt tttggtgttg aacatggtag tgctgaatgg
     1081 tatgatgctc tagaacaaca ttttaagtgg cttcttcaat ataaaatcag tccttatttc
     1141 tgtaaatggg gtaacagcat gcgtgttttg acatacacct ctccatggcc tgctgatcat
     1201 cccaaatcag atgaattttt ttcagatcct cgtctcgcag cttatgctgt gccatatagt
     1261 cctgtagtct cttgtggtga tttagcaaag gattatctgc agaaggaagt tgagatcttg
     1321 agatcaaaaa gtcattggaa aaaagcctac ttttacctgt gggatgagcc acttaatgta
     1381 caacagtatg atgctattcg tcaccaagct agtgagattc atgtctatgc acctgatgca
     1441 cgtgtattga ctacctacta ctccggtcca agtgatgcgc ctcttgctcc aaataatttt
     1501 gaggcttttc tgaaagtacc agggttcctt cgcccgcata cacaaattta ctgtacaagt
     1561 gaatgggtga ttggtaaccg ggaggaccta gtgaaggaca taattgcaga gatacaaacc
     1621 gagaataatg aggaatggtg gacgtatgtt tgcatgggac catcggatcc tcatcctaac
     1681 tggcacctgg gtatgcgagg tacacaacat cgtgccgtca tgtggcgtgt atggaaagaa
     1741 ggtggaactg ggtttcttta ttggggcgcc aactgctacg aaaaggcaac tgttgccgga
     1801 gcagagatca agttcaggcg tgggctaccc ccaggtgacg gggtattgtt ttacccaggt
     1861 gaagttttct cgtcttcaca tgaaccagtg gcttctctta ggttagagcg ccttctgagt
     1921 ggcttgcagg acatagagta cctgaagctg tacagctcaa aatatggtag ggatgaaggg
     1981 cttgcgattc tggaaaagac gggtatgtat caagggccag agcgttacac tctcgaccac
     2041 aacccaatag acataatgcg gggtgagata ttcagaacat gtcggggctc atagatatat
     2101 aggaggaggt cttttggtgt atttatttat gagttgtagt agtcatataa atatgttgag
     2161 aatcaaagtt ccacagcata gttccatgca gcgttcatgt ttttgcatgt ggcatgaaac
     2221 gttacaaatg atgaccctaa atctgtttct ttttttgttt aaatcctata tatttaggtt
     2281 gtggta
//
LOCUS       XM_071830230            1441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At2g39510-like (LOC139840010), mRNA.
ACCESSION   XM_071830230
VERSION     XM_071830230.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1441
                     /gene="LOC139840010"
                     /note="WAT1-related protein At2g39510-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139840010"
     CDS             53..1201
                     /gene="LOC139840010"
                     /codon_start=1
                     /product="WAT1-related protein At2g39510-like"
                     /protein_id="XP_071686331.1"
                     /db_xref="GeneID:139840010"
                     /translation="MMFEKLKPYLYVIFLQFGNAGLVIIAKAALNHGMNHYTFATYRN
                     LIATLVITPFALFFERKGRPKLTISVFLKIMLLGFLEPVVDQNLYYAGMKYTTATFAA
                     AMGNIIPAMTFLMAWICRLEKVNIKKIHSIGKIVGTLVTVGGAMIMTVVAGPTIGLPW
                     TKGTTTTNHNQSTVSVSPEDNIKGSIMIIIGCLSWSCFYIVQAITLRSYPAELSLTAL
                     ICAAGTLEGSIVTVIAERGDNAAWRLHWDAGLVTMVYGGVICSGLGYYLSGIIMKEKG
                     PVFVTAFNPLTMVIVAILGSFVLSEQLNLGRILGAVVIVAGLYLVIWGKTKDQSQSDE
                     KRDPTQIQPGNQQIPLTMSNTKLGKYDQDSLSIAIPPNNEMIKKTNGS"
     misc_feature    104..1138
                     /gene="LOC139840010"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
ORIGIN      
        1 catcaaatat agagcataca caaacaaaga gtttaagaac attaaaaaca acatgatgtt
       61 tgaaaaatta aagccatatt tatacgtcat atttttacaa tttgggaatg caggtttggt
      121 cattattgcc aaggctgcac ttaaccatgg catgaatcac tacacttttg cgacctatcg
      181 aaacctcatt gccacccttg ttatcactcc ttttgctctt ttcttcgaga ggaaggggag
      241 gccaaagttg acaatttcag tgtttttgaa gataatgttg ctaggcttct tagagcccgt
      301 cgtcgatcaa aatttatact acgcgggaat gaagtataca actgcaactt ttgcagctgc
      361 aatgggtaac ataatccctg ctatgacgtt tctcatggcg tggatatgcc ggttggagaa
      421 ggtgaatatc aagaaaattc atagcattgg gaagatagtt ggaacattag tgacagtggg
      481 gggtgcgatg atcatgacgg tggttgcagg accaacaatt ggtttgccat ggaccaaggg
      541 cacaaccacc acaaaccata accaatctac agtctctgta agccctgaag acaatatcaa
      601 gggctcgatc atgatcatta tcggttgttt gtcgtggagt tgtttttaca ttgtccaagc
      661 cattacattg aggtcatacc ctgcagagct ttctcttaca gctctaattt gtgcagcagg
      721 aacactagaa ggaagtatag tgaccgtaat agcagaacgg ggagacaacg cagcctggag
      781 actacattgg gatgctggac ttgtgactat ggtctatggt ggagtaatct gttccggatt
      841 aggttactat ctttcaggaa taataatgaa agagaaaggg ccagttttcg tcactgcatt
      901 caaccctcta actatggtta tcgttgcaat cttaggatct tttgttttgt ctgaacaact
      961 aaatttagga aggattcttg gagcagtggt gatcgtggca ggattatact tggtgatttg
     1021 gggcaagacc aaagatcaaa gtcagtctga tgaaaaacgt gacccgactc aaattcaacc
     1081 gggtaatcaa caaattccgt tgacaatgag taacacaaaa ttgggaaaat atgatcaaga
     1141 tagtctctcc atagcaatac caccaaacaa tgagatgatt aagaaaacta acgggagtta
     1201 gagtagctaa atgttcgttt atgagaggga agactttaag attaaactaa taataacttg
     1261 tattactaga cttcacttac gtcttcaagt tttctattaa aatatatttc aaaattaatc
     1321 cttttgataa tgatgcacca tatcatttct ttcacatcta atttgctaac aatctgccta
     1381 ctttttggtt atggtgcatg tctacacaca cttgtacact tgtatatatt ttatcaatca
     1441 t
//
LOCUS       XM_071830231            1639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CDP-diacylglycerol--serine
            O-phosphatidyltransferase 1-like (LOC139840011), transcript variant
            X1, mRNA.
ACCESSION   XM_071830231
VERSION     XM_071830231.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1639
                     /gene="LOC139840011"
                     /note="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139840011"
     CDS             208..1488
                     /gene="LOC139840011"
                     /codon_start=1
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase 1-like"
                     /protein_id="XP_071686332.1"
                     /db_xref="GeneID:139840011"
                     /translation="MEANGYMRGRRRGHVAQYSDEVSTSTNDDEFDPWTAWAYKPRTI
                     SLLFIGACFLIWASGALDPESSSSTDLITSVKRGIWAMIAVFLTYCLLQAPSTLLIRP
                     HPAIWRLVHGLAVVYLVALTFLLFQTRDNARQFMKYLHPDLGVELPEKSYGADCRIYV
                     PDHPTNRFINVYETLFDEFVPAHIFGWWGKAIMIRNQPLLWVLSIGFEFMELTFRHIL
                     PNFNECWWDSIVLDILICNWFGIWAGMQTVRYFDGKTYEWVGISRQPNILGKVKRTLG
                     QFTPAHWDKDEWHPLLGPWRFIQVLSLCIVFLTVEMNTFFLKFCLWIPPRNPLVVYRL
                     VLWWLVAIPTIREYNSYLQDRKPVKKVGAFCWISLAICIIELLICIKFGHGLYPTPMP
                     KWLVILWTSAGVGLSVFLLLWTRQSRRILKRKQI"
     misc_feature    319..1377
                     /gene="LOC139840011"
                     /note="CDP-diacylglycerol-serine
                     O-phosphatidyltransferase; Region: PLN02930"
                     /db_xref="CDD:178518"
ORIGIN      
        1 tgaaaactta attaatcaag aaaccatttt tacaagtcga aattgattgg gagaaaaaac
       61 ccaaataggt tttagaaatt caaaccccga ttaatcagct tttcacaatt tcaattcaaa
      121 tattcaggtt tttataatca agagatcgaa ccaaggcttt gtttcttcaa atttgcgaga
      181 tcaagattcg ttaaagaaaa aaggtttatg gaggcgaatg gttatatgag aggaaggaga
      241 agaggtcatg ttgctcaata tagtgatgaa gtgagcacat caactaatga tgatgaattc
      301 gacccatgga ccgcttgggc ttataagcct cgaaccattt cattgttatt cattggtgca
      361 tgttttctta tttgggcgag tggagctctg gatcctgaaa gtagttcatc gactgatctt
      421 attacatcag tcaaaagggg catatgggca atgattgcag ttttcctgac ttattgcttg
      481 ttgcaagctc cttctacatt actaattagg ccacatccag caatttggcg ccttgttcat
      541 gggttagctg ttgtttacct cgttgcgcta acttttttgc ttttccagac acgtgacaat
      601 gctcggcagt ttatgaagta tttacacccc gatcttggtg ttgaacttcc cgaaaaatca
      661 tatggtgccg attgtcgaat ttatgtacct gatcatccaa ctaacaggtt tataaatgtt
      721 tatgagacac tttttgatga atttgttcct gctcatattt ttggatggtg gggcaaagca
      781 ataatgattc gtaatcaacc ccttttatgg gtattatcaa tcgggtttga gttcatggag
      841 ctaacttttc gccacatttt accaaatttc aatgagtgtt ggtgggacag catcgttctt
      901 gacatattaa tctgcaattg gtttggtatt tgggcaggaa tgcaaactgt tcgctatttt
      961 gatggtaaga cgtacgagtg ggttggaata agccgtcaac cgaatatatt aggcaaagtg
     1021 aaacggacat tgggccaatt tacgcctgca cattgggaca aagatgaatg gcacccactt
     1081 cttggtccat ggcggttcat tcaagttctt agcctttgca ttgtgttctt aacggttgaa
     1141 atgaacacgt ttttccttaa gttttgcctt tggattcctc ctcgaaaccc gctcgttgtt
     1201 tatagattgg tcctttggtg gctcgttgca atcccaacaa ttcgagaata taattcttac
     1261 ctacaagacc ggaagccggt taaaaaggta ggagcttttt gttggatttc gcttgccata
     1321 tgcatcattg aactcctcat ctgtatcaaa tttggacatg gtttatatcc aactccaatg
     1381 ccgaaatggc tggtaatttt gtggacaagt gctggtgtgg gcctttcggt attcttattg
     1441 ttgtggacac ggcaatctcg taggatttta aaacgaaagc aaatatgaaa ttttaattgg
     1501 tttgtgagtt ttttagctat tctttaattc cttggtagta gaaagaagtt tgtaaatgct
     1561 aattgcttga atttgtaaat gtttatcatt tgaggatgag ttatcctagt ggtgttttat
     1621 ctattcagtt tattcaatt
//
LOCUS       XM_071830232            1644 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CDP-diacylglycerol--serine
            O-phosphatidyltransferase 1-like (LOC139840011), transcript variant
            X2, mRNA.
ACCESSION   XM_071830232
VERSION     XM_071830232.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1644
                     /gene="LOC139840011"
                     /note="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139840011"
     CDS             213..1493
                     /gene="LOC139840011"
                     /codon_start=1
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase 1-like"
                     /protein_id="XP_071686333.1"
                     /db_xref="GeneID:139840011"
                     /translation="MEANGYMRGRRRGHVAQYSDEVSTSTNDDEFDPWTAWAYKPRTI
                     SLLFIGACFLIWASGALDPESSSSTDLITSVKRGIWAMIAVFLTYCLLQAPSTLLIRP
                     HPAIWRLVHGLAVVYLVALTFLLFQTRDNARQFMKYLHPDLGVELPEKSYGADCRIYV
                     PDHPTNRFINVYETLFDEFVPAHIFGWWGKAIMIRNQPLLWVLSIGFEFMELTFRHIL
                     PNFNECWWDSIVLDILICNWFGIWAGMQTVRYFDGKTYEWVGISRQPNILGKVKRTLG
                     QFTPAHWDKDEWHPLLGPWRFIQVLSLCIVFLTVEMNTFFLKFCLWIPPRNPLVVYRL
                     VLWWLVAIPTIREYNSYLQDRKPVKKVGAFCWISLAICIIELLICIKFGHGLYPTPMP
                     KWLVILWTSAGVGLSVFLLLWTRQSRRILKRKQI"
     misc_feature    324..1382
                     /gene="LOC139840011"
                     /note="CDP-diacylglycerol-serine
                     O-phosphatidyltransferase; Region: PLN02930"
                     /db_xref="CDD:178518"
ORIGIN      
        1 tgaaaactta attaatcaag aaaccatttt tacaagtcga aattgattgg gagaaaaaac
       61 ccaaataggt tttagaaatt caaaccccga ttaatcagct tttcacaatt tcaattcaaa
      121 tattcaggtt tttataatca agagatcgaa ccaaggcttt gtttcttcaa atttgcggtt
      181 agagatcaag attcgttaaa gaaaaaaggt ttatggaggc gaatggttat atgagaggaa
      241 ggagaagagg tcatgttgct caatatagtg atgaagtgag cacatcaact aatgatgatg
      301 aattcgaccc atggaccgct tgggcttata agcctcgaac catttcattg ttattcattg
      361 gtgcatgttt tcttatttgg gcgagtggag ctctggatcc tgaaagtagt tcatcgactg
      421 atcttattac atcagtcaaa aggggcatat gggcaatgat tgcagttttc ctgacttatt
      481 gcttgttgca agctccttct acattactaa ttaggccaca tccagcaatt tggcgccttg
      541 ttcatgggtt agctgttgtt tacctcgttg cgctaacttt tttgcttttc cagacacgtg
      601 acaatgctcg gcagtttatg aagtatttac accccgatct tggtgttgaa cttcccgaaa
      661 aatcatatgg tgccgattgt cgaatttatg tacctgatca tccaactaac aggtttataa
      721 atgtttatga gacacttttt gatgaatttg ttcctgctca tatttttgga tggtggggca
      781 aagcaataat gattcgtaat caaccccttt tatgggtatt atcaatcggg tttgagttca
      841 tggagctaac ttttcgccac attttaccaa atttcaatga gtgttggtgg gacagcatcg
      901 ttcttgacat attaatctgc aattggtttg gtatttgggc aggaatgcaa actgttcgct
      961 attttgatgg taagacgtac gagtgggttg gaataagccg tcaaccgaat atattaggca
     1021 aagtgaaacg gacattgggc caatttacgc ctgcacattg ggacaaagat gaatggcacc
     1081 cacttcttgg tccatggcgg ttcattcaag ttcttagcct ttgcattgtg ttcttaacgg
     1141 ttgaaatgaa cacgtttttc cttaagtttt gcctttggat tcctcctcga aacccgctcg
     1201 ttgtttatag attggtcctt tggtggctcg ttgcaatccc aacaattcga gaatataatt
     1261 cttacctaca agaccggaag ccggttaaaa aggtaggagc tttttgttgg atttcgcttg
     1321 ccatatgcat cattgaactc ctcatctgta tcaaatttgg acatggttta tatccaactc
     1381 caatgccgaa atggctggta attttgtgga caagtgctgg tgtgggcctt tcggtattct
     1441 tattgttgtg gacacggcaa tctcgtagga ttttaaaacg aaagcaaata tgaaatttta
     1501 attggtttgt gagtttttta gctattcttt aattccttgg tagtagaaag aagtttgtaa
     1561 atgctaattg cttgaatttg taaatgttta tcatttgagg atgagttatc ctagtggtgt
     1621 tttatctatt cagtttattc aatt
//
LOCUS       XM_071830233            2813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-sorting protein
            BRO1-like (LOC139840012), mRNA.
ACCESSION   XM_071830233
VERSION     XM_071830233.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2813
                     /gene="LOC139840012"
                     /note="vacuolar-sorting protein BRO1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139840012"
     CDS             168..2672
                     /gene="LOC139840012"
                     /codon_start=1
                     /product="vacuolar-sorting protein BRO1-like"
                     /protein_id="XP_071686334.1"
                     /db_xref="GeneID:139840012"
                     /translation="MASPSSATNIMLSINEKKTVTIDLYRPLRNYIVANYSERQAQTL
                     EDDLETLKQLRISIERSTTDSLTSRRDLYQTYFKALTAVESRFPISSDKDHVNSVTFT
                     WYDSFKTRNKASQQNIHLEKAAVLFNLGAVYNQIGLGFDRSTVEGRRQAVQSFTAAAG
                     AFAYLRDNEAAKASVGNSVTVDVSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCA
                     KISRQAGLYYEEALAALNFAPLSQHFDKTWTSHIQLKTALFNGEACYRSSLELHDKEE
                     IGDEIARLKNGISVLSDAKKSAPRGAPQQILDAINKLEGNLNINLDRAMKENDRVYLM
                     RVPPVSSLPPLPGFSLVKSMNMNDVLDASKDRMFAGLVPDSSAKALSRYTEMLDDVIR
                     TQAERLQQGSELARVNLKEMNLPDSILALEGHSMLPMALREDVEAVQVCGGPAGLQGE
                     LQQLQDLRRVNHELLVQTEQLIQKEATEDAQFRSQFGARWTRNPSSTLTKNLQDRLNR
                     FAANLKQAADSDGKIERSVKDNMALMSILDSRPIESALPTLARPILSLDANEDAVVGG
                     LKQSLRQLETLGTQRAGLEDMLKDMKRKDDILPKLMTSTGSYEDLFRKEISKYDHISE
                     EISQNLQAQEQLLLQIQAQNNQFASAFNIDDYNASCEKCYKQIEAAIAKYREIKENIN
                     EGLKFYVTLQEAITNIKQQSSDFAMTRSIQSREMIEDLQRQISGLSVQDGRNSSSHTY
                     SQPGPANMHYRPGPQTPYYQPPPSGYVQPPSPLPPPSGGSPYPPQYGQQPGPTGSQYG
                     QPGYPGWQYAQGQQPGSGPSYTPYPPNQNQSGYYKQ"
     misc_feature    198..1268
                     /gene="LOC139840012"
                     /note="Protein-interacting, N-terminal, Bro1-like domain
                     of an Uncharacterized family of the BRO1_Alix_like
                     superfamily; Region: BRO1_Alix_like_1; cd09246"
                     /db_xref="CDD:185769"
     misc_feature    order(564..566,573..575,612..614,621..626,774..776,
                     783..788,813..815,822..827,1209..1211,1215..1217,
                     1221..1223,1227..1229)
                     /gene="LOC139840012"
                     /note="putative ESCRT-III binding site; other site"
                     /db_xref="CDD:185769"
     misc_feature    1284..2294
                     /gene="LOC139840012"
                     /note="Protein-interacting V-domain of mammalian Alix and
                     related domains; Region: V_Alix_like; cl14654"
                     /db_xref="CDD:353824"
     misc_feature    order(1527..1529,1701..1703,1713..1715,1722..1727,
                     2205..2207,2214..2219,2226..2228,2235..2237)
                     /gene="LOC139840012"
                     /note="putative YPXnL-motif binding site; other site"
                     /db_xref="CDD:185746"
     misc_feature    <2328..>2663
                     /gene="LOC139840012"
                     /note="High molecular weight glutenin subunit; Region:
                     Glutenin_hmw; pfam03157"
                     /db_xref="CDD:367362"
     polyA_site      2813
                     /gene="LOC139840012"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttaaaaataa aaaaaaaaaa atctttaaag tgttcacaat atctccttca ttttgccagg
       61 taatcatcgt ccacttccga tcgcacaaat cataatcaat caatcaatcg tattcataaa
      121 ctgccattaa ctacctgata atcaccgtca actgactcac caaacagatg gcatctccgt
      181 catcggcgac gaacatcatg ctctcaatca acgagaaaaa aaccgtcaca atcgatctct
      241 accgtccgct tcgtaactac atagtcgcca attactccga acgccaagct caaaccctag
      301 aagacgatct cgaaacccta aaacaactcc gaatcagcat cgaacgatca acaaccgatt
      361 ccctcacttc acggcgtgac ctctatcaaa cttacttcaa agccttaaca gctgttgaat
      421 ctaggtttcc gatttcatcc gataaggatc acgtgaattc tgttacgttc acgtggtacg
      481 attcgtttaa aaccagaaac aaagcgtctc aacagaatat acatttagag aaggctgctg
      541 ttttgtttaa tttaggtgcg gtgtataatc agatagggtt agggtttgac cggtcaacgg
      601 tggaaggacg aaggcaggcg gtgcagtcgt ttactgctgc agctggtgct tttgcttatt
      661 tgagagataa tgaggcggcg aaggcttcag ttgggaattc ggttacagtt gatgtttcag
      721 ttgagtgtgc agggatgctg gagaggctga tgcttgctca agcacaggag tgtgtgtttg
      781 agaacacaat tgctaaagga agcactcctg gcgtttgtgc taagatttct agacaggctg
      841 gactgtacta tgaagaagct ctagctgcac taaatttcgc acctcttagt cagcattttg
      901 acaagacatg gacgtcacat attcagctaa agacggcttt attcaatggt gaggcttgtt
      961 ataggagtag tttggagctt catgataaag aagagattgg ggatgaaatt gcacgattga
     1021 aaaatgggat tagtgtttta tccgatgcta aaaagtcggc tccaagaggg gctccgcagc
     1081 aaatacttga tgcaattaat aaacttgaag gcaatcttaa tatcaattta gatagggcta
     1141 tgaaggaaaa tgatagggtc tatcttatga gggttcctcc agtgagttca ttaccacctc
     1201 ttcctggatt ttcgttagtc aagtcaatga atatgaatga tgttttggat gcatccaaag
     1261 atagaatgtt tgcaggctta gtccctgata gtagtgccaa ggctttatct aggtacactg
     1321 aaatgcttga tgatgtcatc agaactcaag ctgagagatt gcagcaaggg agtgagctgg
     1381 cccgcgtgaa ccttaaggag atgaatctac cagattctat tcttgcttta gaaggtcatt
     1441 ctatgttgcc aatggctcta cgggaagatg tagaggcggt tcaagtttgt gggggcccag
     1501 ctggtttaca aggtgagcta caacaacttc aagatttaag aagggtcaac catgaattgc
     1561 tggttcaaac tgagcagctt attcagaaag aagcaacaga agatgcacag ttcagaagtc
     1621 aatttggtgc acgatggacc aggaatccat ctagtactct cacaaagaat ttacaggatc
     1681 ggttaaacag gtttgcagca aatttgaaac aagctgctga tagtgatggt aaaattgaac
     1741 gttctgtgaa agacaacatg gcactcatgt ctatacttga tagccgcccg atagaatctg
     1801 cccttccaac tttggcaagg ccaatcttat ctttagatgc aaatgaagat gctgttgtgg
     1861 ggggcctgaa acagagcctg aggcaacttg agacactggg tacacaaagg gcgggtctgg
     1921 aagacatgct taaagatatg aagagaaagg atgatatact tcctaaactg atgacatcta
     1981 ccggctcata tgaggatctt ttcagaaagg agatatcaaa atatgatcat ataagtgaag
     2041 aaatatctca aaatctacaa gcacaagagc aattattgct gcaaattcag gctcaaaaca
     2101 accagtttgc aagcgccttt aacattgatg actacaatgc ttcctgtgag aaatgctata
     2161 agcagattga ggctgctata gccaagtatc gagaaatcaa agagaatatc aacgaaggat
     2221 taaagttcta cgttacgctt caggaagcaa tcacaaacat taaacagcag tcaagtgact
     2281 ttgcaatgac ccgaagcata caatctcggg aaatgattga agatctacaa agacaaatat
     2341 cgggtctcag tgttcaagat ggtagaaact cgagcagtca tacttactct caacccgggc
     2401 ccgctaatat gcactacagg cccggacctc aaactcctta ttaccagccg ccgccatcag
     2461 gatacgtcca gccaccatct cctttgccac cgcccagtgg tgggtcccca taccctcctc
     2521 aatatggcca acaaccggga cccactgggt cccaatatgg ccagccgggt tacccaggtt
     2581 ggcagtatgc acagggtcag caaccaggat cggggccttc atacactccg taccctccta
     2641 accagaacca aagtggctac tataaacaat gatttgtcta aatttggagt ggtgagtttt
     2701 cttttatctc gtggatatga tgatgtgtat aaagcaattt gaattgtgca tatggtacag
     2761 aatcaaattt gtggagatgt ggtattttta cctaataaaa tgataaaaaa ata
//
LOCUS       XM_071830234            1926 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840013), mRNA.
ACCESSION   XM_071830234
VERSION     XM_071830234.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1926
                     /gene="LOC139840013"
                     /note="uncharacterized LOC139840013; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840013"
     CDS             157..1650
                     /gene="LOC139840013"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686335.1"
                     /db_xref="GeneID:139840013"
                     /translation="MHDWAIITLSIIASGIFLFLFVYLTRRFCYNPTQQEQQQQPIHR
                     ATSLQNGIMKLHQTDNIFNSNNNKRRTNYYILRRGINSKPLFSWSDNPSLVTDAIENG
                     WSRFAFTNFNSSPSIGSNKSFLGYCGSAGAAIRADCTSGTGTRKELEPVEISWEVCRG
                     SADFMQKIRLNPGFNKVMTSSGFSITALSVIKSALPLPGPDLGNSSPFPQEAYFEITI
                     LSTYEDEIVRVYKEEGEKIKLIQENHVGEKISSESLVHVTSVNSNNGINTRGVNGKIE
                     ELKGRNGGKDIVEGKMEMSIVLSVGLAGGGSLPLKVPGSYPGSVGFNSDGSVFLEGVK
                     LKADVEFNEWVKPDKVIGCGYNPSQKKVYFTIDGQLVREVQCTTEEFGTPLYPTLGAN
                     SDVTLLVNFGQSVFKYAQANLHRTPNPCFIGQLANSPILGFEDSKELFSMGRIDAHWL
                     DRSTKRNAQYFGSVNRGVSDYDESSEGDLFEIVLDSNSRGRSPSTHF"
     misc_feature    <1048..1362
                     /gene="LOC139840013"
                     /note="SPRY domain in Ran binding proteins, SSH4, HECT E3
                     and SPRYD3; Region: SPRY_RanBP_like; cd12885"
                     /db_xref="CDD:293943"
ORIGIN      
        1 atataaatac aaaaaatata tattccaccc atcgttctca gttacttctt gttcaatgct
       61 tacttttctt gatctagtcc accctctctt ttatcataat aaataaaacc ctccgatcac
      121 tcaacgacca ccatagtcaa tccttaaccg gaaacgatgc acgattgggc tatcatcacc
      181 ttatccataa tcgcctctgg aatattcctt ttcctcttcg tctacctcac gcgccgcttt
      241 tgctacaatc ccacccaaca agaacaacaa caacaaccga tccatcgtgc aacctcgtta
      301 caaaacggaa taatgaaact acaccaaaca gataacatct tcaacagcaa taacaataaa
      361 cgacgaacaa attactatat tctccgacgt ggaattaact caaaaccttt gtttagttgg
      421 tccgacaacc cttctttagt aacggacgca attgaaaatg gatggtcaag attcgctttc
      481 acaaatttca attcttcacc ttcaatcggt tctaacaaat cctttctggg ctattgtggt
      541 tccgctggtg cagcaattcg tgcagactgc accagcggaa ccgggaccag aaaagaatta
      601 gaaccggtgg aaataagttg ggaagtttgt cggggatctg cagatttcat gcaaaaaatt
      661 cgtctaaatc caggattcaa taaagttatg acatcatccg gtttttcaat aacggcttta
      721 tctgtgatta aatcggcttt accattaccc ggtccggatt tagggaactc atctcctttc
      781 ccacaagaag cttatttcga aattactatt ttgtccacgt atgaagatga aattgtgagg
      841 gtttataagg aagaaggtga gaagattaaa ttgattcaag aaaaccatgt tggtgaaaag
      901 atttcatcgg aatcattggt tcatgtaacg agtgtgaata gtaataatgg aataaatact
      961 aggggtgtga atggtaaaat tgaagagttg aagggtcgaa atggggggaa agatatagtt
     1021 gaggggaaaa tggaaatgag tattgtgttg tcggtaggac ttgccggagg tgggtcgttg
     1081 ccgttaaaag ttccgggaag ttatccggga tcggttggat tcaattccga cggctccgtt
     1141 tttctagaag gagttaaact gaaggctgac gtggaattta acgaatgggt aaaacccgat
     1201 aaggtgatcg gttgcggata caacccgagc caaaagaaag tttacttcac aatagacggt
     1261 caactcgtac gtgaagtaca atgcacaacc gaagaatttg gaacacctct atatccgact
     1321 ttgggagcaa atagtgatgt taccctacta gtaaattttg gacaaagcgt ctttaaatat
     1381 gcacaagcga atttacatag gaccccgaat ccttgcttca ttggacaact tgcgaattct
     1441 ccaattttgg ggttcgaaga tagtaaagag cttttttcga tgggaagaat agacgcacat
     1501 tggttagatc gatctacaaa acgaaatgca caatatttcg ggagtgttaa tagaggagta
     1561 tctgattatg acgagtcttc tgaaggcgat ttgtttgaaa ttgtgttaga tagtaatagt
     1621 cgtggaagat caccaagcac acatttttag caaaagatat atatatacaa aaaaaaaaaa
     1681 aaatattctt tttttgcctt cttttgtttg ttagatgtag atgtaaattg taggcatgag
     1741 atggatgcaa aaacaagtgg atgaacgaca aatgaagatg ctttttttga cgttgtgtaa
     1801 tggatgtaaa gctactaatc ccatttcatg gtgacaggat aaaattaata gaaattcttg
     1861 ttaaacgtgt taaatgttga ttaggcttga aaacatatac ggtataatgt tgacattcaa
     1921 ttgcta
//
LOCUS       XM_071830235            1068 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840014), mRNA.
ACCESSION   XM_071830235
VERSION     XM_071830235.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1068
                     /gene="LOC139840014"
                     /note="uncharacterized LOC139840014; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840014"
     CDS             125..793
                     /gene="LOC139840014"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686336.1"
                     /db_xref="GeneID:139840014"
                     /translation="MKYLEYTPFERINAFLDDLNLGERTINGCIEAYSCKHTGSDKRL
                     SFSLENEILDYFGNSPDVDSDSTVEYVSSRSSRKMLIYLILTLSHMYPDYDFSAVKAH
                     QFFTEETWEGFRQIFDTYMSDASKEWMETNEDGSLLETLYKALNEVINLAECDIYIYD
                     PNSDADPFIEKGSLWSYNFFFYNRKLKRVVSFRFSCISNLVTDGFTMEEYYETDEVFD
                     DMDM"
     misc_feature    200..700
                     /gene="LOC139840014"
                     /note="Maf1 regulator; Region: Maf1; pfam09174"
                     /db_xref="CDD:462704"
ORIGIN      
        1 agtaaacaac ccctaatcac atgatcatag tttctgaaat ttttttcctt tccgtttccc
       61 attttgcagt acacttgttt aagttaatca aaatcccgaa gttgtattaa catcattgac
      121 tgtcatgaag tatctggaat acaccccttt tgagcggata aatgcttttc tagatgacct
      181 caatcttggt gaacgtacca ttaatggatg cattgaagct tactcttgca agcatacagg
      241 atcagataag aggctgtctt tcagtttgga aaatgagatt cttgactatt ttggcaactc
      301 tcctgatgtt gactccgatt cgacggttga atatgtttct agtagatcca gccgaaagat
      361 gttgatatat ctgattctta cattatctca tatgtaccct gactatgact tcagtgcagt
      421 gaaagctcac cagtttttca cagaggaaac ctgggaaggt tttaggcaaa tttttgacac
      481 ctacatgtcc gatgcatcta aggaatggat ggagacaaat gaagacggat ccctgctcga
      541 aacgttatac aaagccctaa acgaggttat caacttagct gaatgtgaca tttatatata
      601 tgacccgaac tccgatgctg atccattcat agaaaaagga tctctgtggt catataattt
      661 ctttttctac aatagaaaac tcaagcgtgt tgtgagcttc cgtttcagct gcataagcaa
      721 tttagtgact gatgggttta cgatggaaga atactacgag acagatgaag tatttgacga
      781 tatggacatg tgatgtggaa aatgatgtac atatgtaccg tgttaatatt cgtctaggat
      841 ataaatattg gtagtgtaca aatgggtagt cctgactcct tacacaaatg tatgtaggta
      901 atcacctagt tttaagataa taaatttgtt tatcataaac cgccgccttg tgtatgcgct
      961 aacttgttcc aggcgcatga gcgatttgat ttcagacaac tttagaatgc tcgagtttgt
     1021 ttaatttctg tttgaaagtt gtcaacggtc atttatcatt tgctgatt
//
LOCUS       XM_071830236            1841 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides berberine bridge enzyme-like
            2 (LOC139840015), mRNA.
ACCESSION   XM_071830236
VERSION     XM_071830236.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1841
                     /gene="LOC139840015"
                     /note="berberine bridge enzyme-like 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 39 Proteins"
                     /db_xref="GeneID:139840015"
     CDS             3..1649
                     /gene="LOC139840015"
                     /codon_start=1
                     /product="berberine bridge enzyme-like 2"
                     /protein_id="XP_071686337.1"
                     /db_xref="GeneID:139840015"
                     /translation="MSSLIPCSLTLIFLCFCFNLSNGATNPNLIYDSFLKCLSTNSTQ
                     PDPSLPNIIYGLNANSTAYTTVLQDYIKNRRFNTTSTPKPAIIITPKKESHVQATVLC
                     AKKLGVQIKIRSGGHDYEGTSYVSSEKKFIVLDMFNLRAINVDIATETVVVQAGAQLG
                     ELYYRIWEKSKVHGFPAGVCPTVGVGGHLSGGGYGTMLRKYGLSVDHIIDARIVVADG
                     NILDRKRMGEDFFWAIRGGGGASFGVVLSYTVKLVTVPVVNTVFRIMKTVEENATDLV
                     YKWQTVIPNIDNDLFVRILLQPVTINNKKTVRASFIAHFLGDSVRLLALMNKNFPELG
                     LRKEDCIEVSWIQSVLYWANFDLNTTKQEILLDRHSDNVNFLKRKSDYVQTPVSKPGL
                     KFIFNKLVELGKVGLVFNSYGGRMSEVASDATPFPHRAGNLYKIQYSVNWNDEDPTLT
                     KNYLNETRVLYKFMTNYVSKNPRGAFLNYRDLDIGVMTGTGNAGYKSGKVYGEKYFMG
                     NFDRLVKVKSVVDPNNFFRNEQSIPILPKKSISKSRKVPT"
     misc_feature    222..1583
                     /gene="LOC139840015"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; Region: GlcD;
                     COG0277"
                     /db_xref="CDD:440046"
ORIGIN      
        1 tcatgtcttc actcatccct tgttcactta cattaatctt cctttgtttt tgttttaacc
       61 tttcaaatgg agctacaaat cctaatctaa tctacgactc tttcttaaaa tgtttatcga
      121 ccaactcgac ccaacctgac ccgtcattac ctaacatcat atacgggctc aacgcgaact
      181 ccaccgctta caccacagtc ctacaagatt acataaaaaa ccgtcgcttc aacaccacct
      241 caacacctaa acccgcaatc atcatcaccc cgaaaaaaga atctcatgtc caagccactg
      301 tcctttgcgc caaaaaactc ggtgtccaaa tcaagattcg aagtggcggc catgattatg
      361 aaggaacctc gtacgtttcg tctgaaaaaa agttcatcgt acttgacatg tttaatcttc
      421 gtgctataaa cgtggacatc gccactgaaa ccgttgtggt ccaagctggg gcccaattag
      481 gcgaactata ttacagaatt tgggaaaaaa gtaaggtgca tgggttccca gctggtgtgt
      541 gtccaacagt tggagttggt ggacatttaa gtggtggtgg ttatggtacc atgcttcgaa
      601 aatacgggtt atcggttgat catataatcg atgctcgtat tgtggttgca gatggtaata
      661 ttttggaccg aaaacgaatg ggtgaggatt ttttttgggc catacgtggt ggtggtggtg
      721 ctagttttgg tgtcgtatta tcgtacactg tgaaactagt cacggtgccg gttgttaata
      781 ctgttttccg gataatgaaa acagtagaag aaaatgcaac tgatcttgtt tataaatggc
      841 agacagttat accaaacatt gataatgatt tgtttgttag aatattgtta caaccggtaa
      901 cgattaataa taaaaagacg gttcgagctt cgtttatagc acatttctta ggtgattctg
      961 taagattgtt agccttaatg aacaaaaact tcccggaatt agggttacga aaagaggatt
     1021 gtatcgaggt aagttggata caatcggtac tttattgggc taactttgat ttaaacacaa
     1081 ccaagcagga gattcttcta gatagacatt ccgataatgt gaactttcta aaacgtaagt
     1141 ctgattacgt acaaaccccg gtatcaaaac cggggttaaa gtttatattc aacaagttag
     1201 ttgaattagg taaagttggt ttagttttca actcgtatgg tgggagaatg agtgaagttg
     1261 cgtcagacgc aactccattc ccccaccgag ctggaaactt gtacaagatc cagtactcgg
     1321 tgaattggaa tgatgaggat ccaacactta cgaaaaacta cttgaacgaa actagggttt
     1381 tgtataagtt catgacgaac tatgtatcga agaatccaag aggtgcattt ttgaactaca
     1441 gagatttgga tatcggtgtg atgaccggaa ccggtaatgc tggttataaa tctggcaagg
     1501 tttatgggga gaaatatttc atggggaatt ttgataggtt agtgaaggtg aaaagtgttg
     1561 ttgatcctaa taattttttt aggaatgaac aaagtattcc tattcttcct aagaaaagca
     1621 taagtaagtc taggaaggtg ccaacataag tttagtatcc aaatattcct aattttgttt
     1681 gtccactttt tccacgtaac taataaattt ttttatgtac cattggtttt tatagtattt
     1741 ggagaatgaa tatggcatgc tccatgggtg actgcattgt ttaaattcgg atggtatatt
     1801 taaattctac ccaattttat gagcatgata tgttataatt g
//
LOCUS       XR_011757183             271 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840016), ncRNA.
ACCESSION   XR_011757183
VERSION     XR_011757183.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..271
                     /gene="LOC139840016"
                     /note="uncharacterized LOC139840016; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840016"
     ncRNA           1..271
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840016"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840016"
ORIGIN      
        1 taaatcgagg gttgtcggtt actgatttct atcgtatgga ttgtatatca caggttgaag
       61 ctaagccagt atgcaccggt atcaaaccaa attgtggaat atggacgtac cttggagatt
      121 ccattttcat atttcaatgg agaaaggtag aaagtgctac taaagagtta ctggcgaaga
      181 ctgattttta gtgaacaaca taaaaaaact cctacaatgt tttttgcatt tgcttatcat
      241 caatcgtggt tgatttgaat ctggaaagca t
//
LOCUS       XM_071830237            2400 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840017), mRNA.
ACCESSION   XM_071830237
VERSION     XM_071830237.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2400
                     /gene="LOC139840017"
                     /note="uncharacterized LOC139840017; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840017"
     CDS             139..1434
                     /gene="LOC139840017"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686338.1"
                     /db_xref="GeneID:139840017"
                     /translation="MEHDQQVSKLPPLSSKYPWFIVQNLKDKHGIKTEFLSTLHDPLI
                     KYECQIPEFYGRCILGYFHGWFIISDYTHNVMWFLWNPVTSKIVCLPPLSFKDGDGAS
                     FDECLLTAPPDDPTSVLLLKRSDESTFVFCQINCKRIRMMKWTEISYAKQLKKITSDG
                     ELLHSLTCCNGKIYALNSDSFIGPIVVRVEIVAKNRRVKIQLLMFGGFPSFDPDRCLV
                     RKAFIKGYNTELFCVSVGVDEKTKEIGDVYLFRLDTSIIKWEELECKLKKWDLNSKIV
                     EKVEDDDLRDLQITRVMWEEINELNDAVFYVDLGRDRSIFYNPVVASELRGYIQIRDE
                     TDDMFYLYHVEDRTVIASPMPSHVVSTTHVMMWEGGLEEDDHVDVVTSVAVIEVEQNG
                     SCLYKIPFEVLEMIMKLCVGLEYLNFRATCKLCHHAAHL"
ORIGIN      
        1 cataactatc ttttattaat tattgaataa agtttttttt atatatctcg tcctcatttc
       61 aaagagtttt ttttttcttt tatcgaattt ggggagaaaa aaatcaggcg aagggttcga
      121 tagaccaaca aatttgagat ggagcatgat caacaggttt ctaaattgcc tcctttatct
      181 tcaaaatatc catggttcat tgttcaaaac ctcaaagata aacacggcat taaaacagag
      241 tttttgtcta cactacacga cccgttgatt aaatatgaat gtcaaatccc cgagttttac
      301 ggaagatgta tcctaggtta tttccatggc tggtttatta tatcagacta tacgcataat
      361 gttatgtggt ttctttggaa cccagtaact tcgaagattg tatgtctccc cccgctaagt
      421 tttaaagacg gagatggtgc atctttcgat gaatgtttgt tgacggcccc acccgatgat
      481 cccacttcag tcctcctgtt aaagagatca gatgaatcta catttgtctt ttgccagata
      541 aattgtaaaa gaatcaggat gatgaaatgg actgaaattt catacgctaa acagctcaag
      601 aaaataacaa gtgacggtga attactacat agcctaactt gttgcaatgg taaaatatat
      661 gccttaaatt cggacagctt tattggtcct atcgtcgtac gggttgagat tgttgcaaaa
      721 aacagacgag ttaaaattca actactgatg tttgggggtt tcccttcgtt tgatcccgac
      781 cgttgtttgg tgcggaaagc ttttataaaa ggatataata cggaattgtt ctgcgttagt
      841 gtcggtgttg atgagaaaac taaggaaatt ggtgatgtgt atttgtttcg attagacacg
      901 agtattataa agtgggaaga attggagtgc aaactcaaga aatgggactt gaatagtaag
      961 atagttgaaa aagtggaaga tgatgacctt cgagacttgc aaattactcg agttatgtgg
     1021 gaagaaatta atgaattgaa tgacgctgtc ttttatgtgg atcttggtcg tgatcggtcc
     1081 atattttata accccgtggt tgcctccgag ttaaggggtt atatacaaat tcgagacgaa
     1141 acggacgaca tgttttactt ataccatgtt gaagacagaa ccgtgatcgc atctcctatg
     1201 ccttctcatg tggtctcaac aacccatgtg atgatgtggg aaggagggtt agaagaagac
     1261 gatcatgtcg atgtggtaac atcagttgca gttatcgagg ttgagcaaaa tggatcgtgt
     1321 ctgtacaaga tcccatttga agttttggag atgataatga aactttgtgt cggtttggag
     1381 tacctgaact ttcgtgctac atgcaaactt tgtcatcatg cagcgcacct gtaatacggt
     1441 ggagcaatga gtcatcgtta agaaaattgc ataattattc attaaattca ccctggctaa
     1501 tggttgtata taattatcga gggattgtta cttatacaga tccgttgtca ggtgataact
     1561 actttatgaa gaagaattca catatatcgt ttgtggacga cataatatat tgttcgaggt
     1621 atggttggtt gttgtgtgag agcaccgaat ttgaatgccc ggtgttctat aacccgttca
     1681 caaatcgtct tcgcaagctt ccaaaatttg atggtgtcat aaaaagctta tgtttctcag
     1741 agccacctac ttccgttaat tgtatagttg ctggttatgc tatttgcgat gatgtgatta
     1801 cttggatcta catttcaaag cggaaacggt catggtgttt gatcgaagga cattatgtta
     1861 atgagttccc tatattttct tcgacattta ttggcgaaaa actttatggt gtgtataaag
     1921 atggaaaaac ttttccttca agcgcaagcg catctattag ttcagcaaat tgcccgattg
     1981 agaaaattgt tttggtaaaa gccccgaaaa gtagttacag ctctgcgaca caatatttct
     2041 tgatgaattg tgatgatgaa catcttttat tagtcatggt gagtaagtta ggagaaattg
     2101 aggtattcga gtgggttgat agtacatatc atgggtggaa taaaatagaa agcatagaga
     2161 agcacacaat ttatatttgt ggcacgacat cgatttgcat tgatgccaaa aagcctgata
     2221 tggagaacaa gatctatttc ccgaagcaag tgtggtactc actcgataca catacgtatc
     2281 acacatttga tggagaagtt gtcgaaaaag gttttggagg ttttctggga atgaaaactg
     2341 atttcaactg tcatgcatgg atcgaaccaa gttggtgtta gcgttattgt ctttgcatta
//
LOCUS       XM_071830238            1624 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840019), mRNA.
ACCESSION   XM_071830238
VERSION     XM_071830238.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1624
                     /gene="LOC139840019"
                     /note="uncharacterized LOC139840019; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840019"
     CDS             331..1593
                     /gene="LOC139840019"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686339.1"
                     /db_xref="GeneID:139840019"
                     /translation="MYVGGQYYGLFFLEGIGESDPYKSTIEIAKRITKFIYAHHKTLA
                     LMRRYTNKMEIVRPGVTRFASAFLTLQSLIDKKDELRKMFCGSEWDKCYLSKTKKGND
                     IYKMVMDNRTWYGISKCLKVFSPLVKILRMVDADWKPSMGFLHGELKKAQQEIKEALN
                     NQKIFYEPVMKIIRMKMSGRLDSSLHLAAYLLNPYYLYNDMDIQYDEKVNEAINDVVE
                     TLYPQDLDMQQKILLEELPVYTCRSESFAKLLALKSCEVNTEKYDPANWWTRFGSSAP
                     HLRKIAIRILSLTTSSSGCERNWSTFEAIHTKKRNRLEASKLNNLVFVQFNANLILKN
                     KKRKERGHEVLLTDDTSEAQEWFIDDDVVDAISKPKRSTRRQFLEDDFESEDEEMEID
                     AEDVEYGFYGDQIIEQNGQDQDLDENEV"
     misc_feature    <1117..1311
                     /gene="LOC139840019"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 gttctcctct acacccaatt tagctgctac aatgcacgac atcacaaaac atgagagatt
       61 agcaattgat tcttcaattc ttctcatttc atcttatttc tcacttacaa aggaggggta
      121 aatggcaaca tcaaatccat ccaatgaaac taaaagaaaa caagaagata ctggatggga
      181 gtatggaaga ttgttggatc caaataatag ggatagggtg caatgtaaat tatgtggcaa
      241 tattaatcgt gcaggtatca acagattgaa acaccacatc gcgggtatta ggggaaatgt
      301 tgctccatgt tctaaagcca caaaagaagt atgtatgtag gtgggcaata ttatggtttg
      361 ttttttcttg aaggcattgg tgagtcagac ccatataaat caacaattga aatagcaaaa
      421 aggataacga agtttattta tgcacaccac aaaacattgg ctttgatgag gcgttacaca
      481 aataagatgg aaatcgtgag accaggagtt acacgatttg cttccgcgtt ccttacttta
      541 caaagcttaa ttgataagaa ggatgaatta aggaaaatgt tttgtggtag tgaatgggat
      601 aaatgttatt tatccaagac aaaaaaaggg aatgatatct ataaaatggt gatggataac
      661 agaacttggt acggaataag caaatgttta aaagtgttct cacctttggt caaaatactt
      721 cgaatggtgg atgccgattg gaagccttca atgggatttt tacatggtga gcttaaaaaa
      781 gctcaacaag aaatcaagga ggctttgaac aaccagaaga ttttttatga gccggttatg
      841 aagatcattc gaatgaagat gtcaggtcga ctagattcga gcttacattt ggcggcctat
      901 cttttaaacc catattatct ttacaatgat atggatatcc agtatgatga aaaagtgaat
      961 gaagcaatca atgatgttgt tgaaactttg tatccgcaag atcttgatat gcaacaaaaa
     1021 atattgttgg aggagttgcc agtttacacg tgtagatcag agagctttgc taagttactt
     1081 gcattgaaat catgtgaggt taacaccgaa aaatatgatc cggcaaattg gtggacacgt
     1141 tttggtagct cagcacctca tttgagaaag attgctattc ggatcctttc tctaacaaca
     1201 agttcatccg gatgtgaacg caattggagc acctttgaag cgattcatac aaaaaaaaga
     1261 aatcggttag aagcctcaaa gttaaacaat cttgtttttg ttcaattcaa tgcaaatctg
     1321 attttgaaaa acaaaaaaag aaaggagaga ggtcatgaag ttcttttaac ggatgataca
     1381 agtgaggctc aagaatggtt tattgatgat gatgtggttg atgcaatttc aaaaccaaaa
     1441 agaagcacta gaagacaatt tttggaggac gattttgagt cagaagatga agagatggaa
     1501 atagatgctg aagatgttga atatgggttt tatggggatc aaatcattga acaaaatgga
     1561 caagatcaag atttggatga aaatgaagtt tgaatcagtg aagttaataa atatttgtag
     1621 tctt
//
LOCUS       XR_011757184             350 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840020), ncRNA.
ACCESSION   XR_011757184
VERSION     XR_011757184.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..350
                     /gene="LOC139840020"
                     /note="uncharacterized LOC139840020; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840020"
     ncRNA           1..350
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840020"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840020"
ORIGIN      
        1 gttttgggag cggatctaca acaaatttga aggcggttac ttagataact ttaatattaa
       61 tggttgggga tctatgttgt tgtggtggag ctaccgttta gatcaaatgg attttcagcc
      121 actaaaggac cgccaaagat gtacgatcat gccggtcgac atgattaagt ggatggggat
      181 ttttaaaacg ggtgtaacac ttgacccgaa ttacaccaat cccaatatta cttgttatgc
      241 agacagatcg agactccctt tcccacattg gtcgaagtgt cagaaggtcc tattcccaac
      301 atgtttggaa gatgcggatc actgggtgct tattgtgctt gatcttaagg
//
LOCUS       XM_071830239            2318 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 10-like (LOC139840022), mRNA.
ACCESSION   XM_071830239
VERSION     XM_071830239.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2318
                     /gene="LOC139840022"
                     /note="U-box domain-containing protein 10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139840022"
     CDS             53..1891
                     /gene="LOC139840022"
                     /codon_start=1
                     /product="U-box domain-containing protein 10-like"
                     /protein_id="XP_071686340.1"
                     /db_xref="GeneID:139840022"
                     /translation="MAGVDSTAVLAAIQSLRLVRDVSRTAANGFSGDFKKHCTDLSRR
                     IALLSHLLEEIRDFKGDLKLLNSSSSSSNSLADLTVAVQSSKKLLSVAANFDPKISPD
                     GAAKKIEFQFQSVTLKLEKALANFPYDHFEISEEVQEQVDLVRGLLKRATERYSKPEN
                     SSLGRDPYTVENIIVINQPQQQEEETKVETLLNKSVSKVNKQNEIVHQLEPSSASSVT
                     SSLLDETKKLDAPLFPVDFLCPISLELMRDPVIVSTGQTYERSYIQRWIDCGNTTCPK
                     TQQKLQNVTLTPNYVLRSLITQWCITNNIEQPNLLANRRLKRSDGSFRDVSEDIQAIE
                     ILVRNLSSPSIEERRSTLSEIRSLSKRSTDNRILLAEAGAIPILVNLLTSEDNIIQEN
                     AVTSILNLSIYENNKGLIMLANVVPSIVQLLRVGSMETKENAAATLFSLSLANENKII
                     IGASGAISELVNLLENGSNRGKKDAATALFNLCIYQGNKGRAVRSGIISVLLKMLTNS
                     SSGMVDESLTILSVLASHQEAKAAIVRAGTIPLLIDLTRTGVSRNKENATSILLSLCK
                     RDSENLECISRLGAVIPLTELAKNGSERAKRKAKSLLELLQRSQQI"
     misc_feature    752..910
                     /gene="LOC139840022"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; Region: RING-Ubox_PUB; cd16664"
                     /db_xref="CDD:438326"
     misc_feature    order(755..757,764..766,770..781,836..838,848..850,
                     875..877)
                     /gene="LOC139840022"
                     /note="E2 binding site [polypeptide binding]; other site"
                     /db_xref="CDD:438326"
     misc_feature    980..>1879
                     /gene="LOC139840022"
                     /note="cellulose synthase-interactive protein;
                     Provisional; Region: PLN03200"
                     /db_xref="CDD:215629"
     misc_feature    1034..1126
                     /gene="LOC139840022"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    1175..1252
                     /gene="LOC139840022"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    order(1223..1225,1235..1237,1247..1249,1346..1348,
                     1358..1360,1370..1372,1469..1471,1481..1483,1493..1495)
                     /gene="LOC139840022"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293788"
     misc_feature    1271..1381
                     /gene="LOC139840022"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    1394..1498
                     /gene="LOC139840022"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    1544..1621
                     /gene="LOC139840022"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    order(1592..1594,1604..1606,1616..1618,1715..1717,
                     1727..1729,1739..1741,1841..1843,1853..1855)
                     /gene="LOC139840022"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293788"
     misc_feature    1640..1750
                     /gene="LOC139840022"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    1766..1864
                     /gene="LOC139840022"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
ORIGIN      
        1 acacacacaa accccaaatt caccaccacc accaccacca ccactaacag ccatggccgg
       61 cgttgattcc accgccgtcc ttgctgccat ccaatctctc cgtctcgtca gagacgtctc
      121 tcgtaccgcc gctaacggat tctccggcga cttcaaaaaa cactgcacag acctttctag
      181 aagaatcgct ttactatcgc atttacttga agaaattagg gatttcaaag gcgatttgaa
      241 attgctaaat tcctcatcat cttcttcaaa ttctttagct gacttaactg ttgctgttca
      301 atcatccaaa aaattgctat ctgttgcagc caattttgat cctaagatct cgccggatgg
      361 agcagcaaag aaaatagaat ttcaattcca gagtgtaaca ttgaaactgg aaaaagcttt
      421 agcaaacttc ccatatgatc attttgagat ctcagaggaa gttcaagaac aagttgattt
      481 agtgagaggt ctgttgaaaa gagcaacaga acgatacagt aaacccgaaa attcgagctt
      541 aggtagagat ccttatactg tagaaaacat aattgtgatc aatcaaccac aacaacaaga
      601 ggaagaaacc aaggttgaaa ctttattgaa caaaagtgtt tctaaagtga ataaacagaa
      661 tgaaattgtt catcaattgg aaccttcatc tgcatcatct gtgacatcat ctttattaga
      721 tgaaaccaag aagttggatg cacctttgtt tccggttgat ttcctttgcc cgatttctct
      781 tgaactaatg cgggaccctg ttatcgtctc cacgggacag acttacgaga gatcgtatat
      841 acaaagatgg atcgattgtg ggaacacaac atgtccgaaa actcaacaaa agcttcaaaa
      901 cgttactcta acgcctaact atgtgctaag aagtttaatt acacaatggt gtattactaa
      961 taacatagag caaccaaatt tactagcaaa cagaagacta aaaaggagtg acgggtcgtt
     1021 tcgtgatgta agtgaagata tacaagccat tgaaatactc gtgcggaacc tttcaagccc
     1081 gtcaatcgaa gaacgaagat caactttatc cgaaattcga tcattatcga aacgaagcac
     1141 cgataatcga atactcttag ctgaagctgg agcaattcca attcttgtta atttactaac
     1201 atctgaagat aatatcatac aagaaaatgc agttacttcg attcttaacc tttcgatata
     1261 cgaaaacaac aaaggactta taatgctagc taatgtggta ccttcgattg tacaactatt
     1321 aagagttgga tcaatggaga ctaaagaaaa tgcggctgca acccttttta gcttatcact
     1381 tgctaacgag aataaaatca taattggtgc atctggtgca atttctgaat tagttaatct
     1441 tcttgaaaat ggaagcaatc gaggaaaaaa agatgctgca acagctttgt ttaatctttg
     1501 catttatcaa ggaaataaag ggcgagctgt tcgatcagga attatatcag ttcttcttaa
     1561 aatgttgacc aattcgagta gcggtatggt tgacgaatcg ttgactattc tttcggttct
     1621 cgctagccat caagaagcaa aagcagccat agttagagct ggcacaatac cacttttgat
     1681 tgaccttaca agaacaggag tttcaagaaa caaagaaaac gcaacgtcga tcttgctttc
     1741 tttgtgcaaa agagatagtg aaaatcttga atgcataagt aggcttggtg cagtaatccc
     1801 attaacggaa ttggcgaaaa atgggtcaga acgagctaaa cgaaaggcga aatcgttgtt
     1861 ggagcttctt caaaggtctc aacaaattta acattcggat tgaataataa cctgctaatt
     1921 tgtttattca attcaactga ttcttgatct tcatactcac cgaatttttt ctgagtttaa
     1981 agtgcgaggg aagaaggtaa ttcttgatcc tgatttgtat tttttttttt ttttttttga
     2041 ttgtgtttat gaaattcatt tgatactgtt attgtttgtt tgatatatcc ttatgtggat
     2101 tattgagaat aacctatgaa ctgaatttgt gacaaatttt taggaattaa ttggcaattg
     2161 tatatttttt tgggtgtgat gttaaaatgt attcaagctc atttggcttg tttcgttcat
     2221 gtcattgttt tccttttatc tagtctttat ttttttgact cggttgtaaa cacaaccaac
     2281 tgggtcgaac ttacaggctg tacgttatta gcaaaact
//
LOCUS       XM_071830240             963 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable carboxylesterase 9
            (LOC139840023), mRNA.
ACCESSION   XM_071830240
VERSION     XM_071830240.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..963
                     /gene="LOC139840023"
                     /note="probable carboxylesterase 9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840023"
     CDS             1..963
                     /gene="LOC139840023"
                     /codon_start=1
                     /product="probable carboxylesterase 9"
                     /protein_id="XP_071686341.1"
                     /db_xref="GeneID:139840023"
                     /translation="MSKFDPYEHLKIIKNEDGTITRLIEFPQTPPTNEGDVLPGQTVV
                     SKDVTLDTTKNTWMRIFRPTKIPSNDNKIAKLPLVVYFHGGTFISFKVSDATNHEAMN
                     KLSDEVPTIVISVNFRLAPETKLPGQYDDAMDTLYWVRNQVKDPNGDTWIKEYADISR
                     VFLYGTSCGANIALHASLRALDHDLSPLTIAGIILIQPLIGGKNLTESELKLAADPLF
                     PLPVIDLVWELALPKGTDRDHRFCNPLGDPQVMEKMKKLGRCLVIGFGGDPLIDRQQD
                     LVQMMVMQGVMVEARFDDVGFHGIELVDPRRASAILNFVKEFII"
     misc_feature    235..897
                     /gene="LOC139840023"
                     /note="alpha/beta hydrolase fold; Region: Abhydrolase_3;
                     pfam07859"
                     /db_xref="CDD:400284"
ORIGIN      
        1 atgtcaaaat ttgatccata tgaacacctc aagattatta aaaatgaaga tggtacaata
       61 actcgcttaa ttgaattccc acagacaccg cccactaatg agggtgacgt ccttccgggc
      121 caaacagttg tcagcaagga cgtcaccctc gacaccacta aaaacacatg gatgcgtatt
      181 ttcagaccaa cgaaaatacc atcaaacgac aataaaattg caaaacttcc attagtcgta
      241 tactttcatg gtgggacatt tatttctttt aaagtttcgg atgccacgaa ccatgaagcc
      301 atgaacaaac tctccgacga ggttccaacc attgtgattt cggtcaactt tcggctagct
      361 ccggagacca aactcccggg ccaatacgat gacgcaatgg acaccttata ctgggtcaga
      421 aatcaagtca aagatccaaa tggcgacaca tggatcaaag aatatgctga tatctctaga
      481 gttttccttt atggaacctc atgtggggcc aacattgctt tgcacgcgtc tttacgagct
      541 ctagatcatg atttatcacc attaacaatt gcaggaatca tacttatcca accgttaata
      601 ggaggtaaaa acctgacgga atcagagcta aaactagctg cagacccttt gtttccgttg
      661 cctgtaatcg atcttgtgtg ggaactagcg ttgccaaaag gtacagatcg agatcataga
      721 ttttgtaatc cattaggtga tccccaagtg atggagaaga tgaagaagtt agggaggtgt
      781 ttggttatag gatttggtgg ggacccattg attgatagac aacaagatct tgtgcagatg
      841 atggtaatgc agggagttat ggttgaagca agatttgatg atgttggatt tcatggtatt
      901 gaattagttg atcccagaag agcttctgca attctaaatt ttgttaaaga attcataatt
      961 taa
//
LOCUS       XM_071830241            4655 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative
            1-phosphatidylinositol-3-phosphate 5-kinase FAB1C (LOC139840024),
            mRNA.
ACCESSION   XM_071830241
VERSION     XM_071830241.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4655
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4655
                     /gene="LOC139840024"
                     /note="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 27 Proteins"
                     /db_xref="GeneID:139840024"
     CDS             73..4389
                     /gene="LOC139840024"
                     /codon_start=1
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C"
                     /protein_id="XP_071686342.1"
                     /db_xref="GeneID:139840024"
                     /translation="MVDGDHNMCSQCEIRVSEYCKHCANLEITQKFGNGKIHPSDSPR
                     SSPEPPSLKKVSVRHSTTRSDEDEAEDSAKNFLSPYSLDTTDVDSSSVSTRRDFNSFM
                     SVGSSPSDSPSRIQMCNNRLRNGVHSDDQGTPRSSNDGSFDQEQHLVVLKSNGQTIYD
                     EFSIFNDRCEKSPKPLDFETNDRIWFPPSPDNENEDADSNFFSYADDDDEIGDSSGVF
                     SSASLMTNSPKKNEEHHEVLITVVQGHFRALVSQLLQSEFNSTETWLDIITLLAWQAA
                     NFVKPDTSRGGSMDPGDYVKIKCIASGSPIDSAFIKGVVCTKNIKHKRMTSQYKNARL
                     LILGGALEYQRSKDQLSSIETLIQQEMDHLKTIVSRIEAHRPNVLLVEKSVSSYAQEY
                     LLAKEISLVLNVKRTLLERISRCTGAPITPSTAHIPTTRLGQCELFKLEKVSEEHETT
                     NINKKPLKTLMFFEGCPKRLGCTVLLKGSSREELLKVKHVVQYAIFAAYHLSLETSFL
                     ADEGASLPKMTLKPSLPKPEMINADISSVAPPSEVTDSVNLIEGQSFSDRDVEIVSNS
                     LGNDLEANVDQQDDLYSATDNNQSILVSFSSHCVLNGTVCERSRLLRIKFYGCFDKPL
                     GRYLQNDLFNQTSLCQSCKEPAEAHVTCYTHQQGNLTINVRRIPSLKLLGEKEGKIWM
                     WHRCLRCSHVDGIPPANHRVVMSDAAWGLSLGKFLELSFSNHATANRVASCGHSLQRD
                     CLRFYGMGDMVAFFRYSPIDILSVHLPPSILQFGDHVQQDWLQKEVAELVCKTEGLYE
                     DILDVLNGIESKIELPDSDEFRNHVTELKDQLIKERLEYIDLLQGEDIDVFELNRLRH
                     SLIIDMHFWDRRICSLNLYNRSSNLKPAHDAISWRSDSIPEDVIYDSESNQIDPSETS
                     DTISDSLSASFDLCKNDDLQTHIEQSTSLERAPSAASVLSDKIDSAWAGSGALNLTSN
                     PILSRLSPSPVRVYSFDSAIRQQERVKKGLPPSSLYLSTLRSFHATGDYVHMVRDPLR
                     NIQRRSYSQAIGDDHKLDFTSFLSPASFLPEGARLMIPNGGHPDIVVAVYDNEPTSII
                     SYALTSKEHEEWVIDKANGSVVSNGSAWQSYGSVDQDFNYGSYGSEDPSTAIGSVVTD
                     RKSSNHITIPFEDESGADGKVKFSVTCYYAKQFDGLRERCCNELDYVRSLSRCKRWSA
                     QGGKSNVYFAKSLDERFIIKQVTKTELESFEEFAPEYFKYMTDSLGSGSPTCLAKIVG
                     IYQVTVKHLRVGKEAKMNVLVMENVFFKRNISRVYDLKGSSRSRYNSDTTGTNKTLLD
                     MNLLEALRTNPIFLGCKAKRNLERAVWNDTSFLASIDVIDYSLLVGVDEEEEELVLGI
                     IDFMRQYTWDKHLETWVKASGILGGPKNATPTIISPKQYKKRFRKAMTSYFLTVPDQW
                     SS"
     misc_feature    811..1608
                     /gene="LOC139840024"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; Region:
                     Fab1_TCP; cd03334"
                     /db_xref="CDD:239450"
     misc_feature    3571..4359
                     /gene="LOC139840024"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; Region: PIPKc_PIKfyve; cd17300"
                     /db_xref="CDD:340437"
     misc_feature    order(3709..3711,3736..3738,3742..3744,3922..3933,
                     3964..3966,4021..4023,4162..4164,4207..4212)
                     /gene="LOC139840024"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340437"
     polyA_site      4655
                     /gene="LOC139840024"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatatagttt tagtttgata attatttaaa attaggatta gatcttggaa ttgttatttt
       61 ggtgaagtta aaatggttga tggtgatcat aacatgtgtt cccaatgtga gattagagtt
      121 tctgagtatt gtaagcattg tgctaatctc gaaatcacac aaaaatttgg aaatggtaaa
      181 attcatcctt ctgattcgcc ccgtagtagc cctgaaccac catcattgaa aaaagtatca
      241 gttcgtcact ccacaacaag gagtgatgaa gatgaggcag aggattctgc aaagaacttt
      301 ttaagtccgt atagtcttga tacaacggat gtagattcga gtagtgttag tactaggcgt
      361 gattttaata gttttatgtc tgttggttcg agcccatctg atagtccttc aaggattcaa
      421 atgtgtaata atagacttag aaatggtgta cattcggatg atcaaggaac accaagatct
      481 tcaaatgacg gttcatttga tcaagaacaa catttggttg ttttaaaaag caatggacaa
      541 acgatttatg atgaattttc aatctttaat gaccgatgtg agaaatcacc taagccgttg
      601 gattttgaaa caaacgatcg tatttggttt cctccatcac ccgataacga aaacgaggat
      661 gcagatagta actttttttc gtatgctgat gatgacgatg aaataggaga ttctagtggt
      721 gtgttttcta gtgcaagttt aatgactaat tcgcccaaaa agaatgagga acatcatgag
      781 gtgctgataa ctgttgtcca ggggcatttt agggctcttg tgtcacaatt attacaatct
      841 gagttcaatt caaccgaaac gtggcttgat ataataactt tgttagcatg gcaagcggct
      901 aactttgtta aaccggatac tagtcgaggt gggagtatgg atcccggtga ttatgtaaag
      961 attaaatgta tagcatcagg aagccctatt gacagtgcgt ttattaaagg cgtagtttgt
     1021 acaaaaaata taaaacacaa gaggatgact tcacaataca aaaatgcaag attacttata
     1081 ttaggaggag cacttgagta ccaaaggtct aaagatcaat tatcttctat cgagacgctt
     1141 atacaacagg aaatggatca tttgaagacg attgtttcaa gaatcgaagc tcatcgtcca
     1201 aacgttttac tagtagaaaa aagcgtatct tcatatgcac aagagtatct tttagccaag
     1261 gagatatctt tagtgttaaa cgttaaacgg acgttattgg aacgtatatc gagatgcacg
     1321 ggtgctccga taactccttc gacagctcat atacccacca cacggttagg ccaatgtgag
     1381 ctttttaaat tggaaaaagt gtcggaagaa cacgaaacca caaacataaa caagaagcca
     1441 ctgaaaactt taatgttttt tgaaggctgt cctaaacgtt tgggttgtac ggtgttacta
     1501 aaaggttcat ctcgtgaaga attactgaag gttaaacatg tcgttcaata tgcaatcttt
     1561 gcagcatatc atttatcttt agaaacctca ttcttagctg atgagggtgc tagtttaccc
     1621 aaaatgacac ttaagccgtc actacccaaa cccgaaatga taaatgctga tatttcttca
     1681 gtggccccac catcagaagt cacagattca gtcaatctta tcgaaggtca aagcttttcg
     1741 gatagagatg ttgaaatagt ttcaaattca ttaggcaatg atctagaagc aaacgtagat
     1801 caacaagatg atttatattc agccaccgat aataatcaga gtatattagt atcgttttct
     1861 agccattgtg tgttgaatgg aactgtgtgt gaacgatcta gactgttgag aataaaattc
     1921 tatggctgct tcgataaacc actcgggagg taccttcaaa atgatttatt caatcaaaca
     1981 tcattgtgcc aatcttgtaa agaaccagct gaagcacatg tgacatgtta cactcaccaa
     2041 caaggaaatc taacgattaa cgttagacgc attccgtcac taaaattact tggtgaaaaa
     2101 gaaggaaaaa tatggatgtg gcatcgttgt ttgagatgct cccacgtaga cgggatccct
     2161 cccgcaaatc accgagtcgt tatgtctgac gccgcttggg gactctcgtt agggaagttt
     2221 ctagaactta gtttttcgaa tcacgcaacc gctaatcgtg ttgctagttg cggccattcg
     2281 cttcaacgag actgccttcg attctatggc atgggtgata tggttgcgtt tttccgttac
     2341 tcaccgatcg atattctttc cgtgcattta cctccgtcga ttcttcaatt tggtgaccat
     2401 gttcaacagg actggttgca gaaagaagta gcagagcttg tgtgcaagac agaaggtttg
     2461 tatgaagata tactggatgt gctgaatggg attgaatcaa aaatcgagtt acctgattca
     2521 gacgagttta ggaatcatgt taccgagttg aaagatcaac tgatcaaaga aagacttgag
     2581 tatattgatc tgcttcaggg cgaagatata gacgtgtttg aactaaaccg tttacggcat
     2641 tcgctcatta tcgatatgca tttctgggac cgaagaatct gttcactaaa tctttataat
     2701 cgaagctcta atttaaaacc cgctcacgac gccatatctt ggcgaagcga ttcgattccc
     2761 gaggacgtca tttacgattc agaatcaaat caaatcgacc caagtgaaac ttccgacacc
     2821 atatccgact cgttatcagc atctttcgat ctatgcaaaa acgatgacct acaaacccat
     2881 atcgaacaat caacttcact agaacgggcc ccgtcagccg catctgtttt atcggataaa
     2941 atagactccg catgggccgg atccggggct ttaaatttaa ccagtaaccc gatacttagt
     3001 cgactttcac cgtcacccgt acgagtttat tcattcgatt ccgcaattcg acagcaagaa
     3061 cgggtcaaaa aagggttacc gccatcgtcg ttgtatcttt caacgcttag atcgtttcat
     3121 gcgacgggtg attacgttca catggttcga gatccgttac gtaacattca acgaaggagt
     3181 tattcgcaag ccatcggtga tgatcataag ctcgatttca cttcgtttct ttcgccggct
     3241 tcgtttcttc ccgaaggtgc gcgtttgatg attccaaacg gtggtcatcc ggacatagtc
     3301 gttgcggttt acgacaacga gccgactagt ataatttcgt atgcgcttac ttctaaagaa
     3361 catgaagaat gggttattga taaagcgaac gggtcggtag tttcaaacgg gtcagcttgg
     3421 cagtcatacg ggtcagtgga tcaagacttt aattacggaa gctacgggtc tgaagacccg
     3481 tcaacagcaa tcgggtcagt ggtgacggat cgaaaaagtt ctaatcatat aacgattccc
     3541 ttcgaggatg aatctggtgc tgatggtaag gttaaattct cggtgacgtg ttactatgcg
     3601 aaacaattcg atggtttacg agaacgatgt tgtaacgaat tagattatgt tcgttcgttg
     3661 agtcggtgca aaagatggag cgcacaaggc gggaaaagta acgtttattt tgcgaaatcc
     3721 cttgatgaaa gatttattat taagcaagtt acgaaaactg aactcgaatc atttgaggaa
     3781 tttgcacccg aatactttaa atatatgact gattcattag gctcgggaag tccaacgtgc
     3841 ttagccaaga tcgtcggaat ttatcaggtg accgtgaaac atttacgagt gggaaaagaa
     3901 gcgaaaatga acgtgttggt gatggaaaat gtgtttttca agagaaacat ttcgagggtt
     3961 tacgatttaa aaggctcgtc aaggtctcgt tacaactccg atacaaccgg aacaaacaaa
     4021 acgctactcg acatgaattt gttagaagca ttacgtacaa atcccatatt tcttggttgc
     4081 aaagctaaac gaaacctaga acgagctgtt tggaacgaca catctttctt agcatcgatc
     4141 gacgtgatag attattcgtt actagttgga gtggatgaag aggaggagga actggttttg
     4201 gggattatag attttatgag acaatataca tgggacaaac atttagaaac atgggtgaag
     4261 gcatccggga ttttaggtgg gcccaagaat gcaactccaa ctattatttc accaaaacaa
     4321 tacaagaaaa ggtttcgaaa agctatgaca agttattttt taactgtacc tgatcaatgg
     4381 tcgtcatgaa catacattca taaaatatgg gagttttatt tatttataca acataaataa
     4441 taataatggt tgttattgta acttgagggt acaacatacc cttttgatag gcaaatttgt
     4501 atgcaaatgt gtacaaagtt agatgttgac gatttttttc ttttgtttta tttttttaaa
     4561 gtaaaaggtt gtacatgtgt tgcattatag gggatcctgc ttggaaagtt ggttcagggg
     4621 aacttttttt aatgaagcga aacattttag ttcaa
//
LOCUS       XM_071830243            3523 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DExH-box ATP-dependent RNA
            helicase DExH5, mitochondrial (LOC139840025), mRNA.
ACCESSION   XM_071830243
VERSION     XM_071830243.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3523
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3523
                     /gene="LOC139840025"
                     /note="DExH-box ATP-dependent RNA helicase DExH5,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139840025"
     CDS             127..3210
                     /gene="LOC139840025"
                     /codon_start=1
                     /product="DExH-box ATP-dependent RNA helicase DExH5,
                     mitochondrial"
                     /protein_id="XP_071686344.1"
                     /db_xref="GeneID:139840025"
                     /translation="MGLHSHLYTKVLVISKVPLPNYRFDLDDKRPQREVSLPPGLLKS
                     VNDHLKEYLAFKAKSMNGSRDNFLSKCSNGIIVNEDGIFDQPEPLIRNHLAMEKINGL
                     RTVQLRTEQQAWQASADGFRMLQFRNSLPAYKEKDAILDLISQNQVVIISGETGCGKT
                     TQIPQFILEQEIEYMRGAACNIICTQPRRISAMSVSERVAAERGEKLGDTVGYKVRLE
                     GMKGRDTRLLFCTTGILLRRLLIDRDLKGVTHVIVDEIHERGMNEDFLLIVLKELLPR
                     RPELRVILMSATLDANLFSSYFNGAPLLQIPGFTHPVHSYFLEDVLEITGYRLTQENQ
                     IDDYGQERAWKSNKQFVKKRKSQIASAVEDAFGAANFMYYNQQTRDSMSCWNPDSMNF
                     NLIEFLLCSLCLNQKPGAILVFLTGWDDISSLKDKLQAHYLLGDTGRVWLLTCHGSMA
                     SDEQRLIFERPVDGVRKIVLATNMAETSITIDDVVFVIDCGKAKETTYDALNNTPCLL
                     PSWISKVSAKQRRGRAGRVQPGECYHLYPRSVYEAFAEYQLPEILRTPLQSLCLQIKS
                     LKFGSISEFLSKALQSPELLAVQNAIEYLKIIGALDESENLTVLGRFLTLLPVEPKLG
                     KMLILGAILNCLDPILTIAAGLSVRDPFLAPIDKKDLAEAAKAQFSRDYSDHLALVRA
                     YESWKVAEREYKGYEYCWNNFLSYQSMKAIDSLRSEFQTLLYGTGLIDFNIIKHNTWS
                     YDENLIRAVICYGLYPGICSVVHNEKSFSLKTMEDGPVHLHSNSVNARDPKIPYPWLV
                     FNEKVKVNSIFLRDSTAVSDSVLLLFGGSISKGDMDGHVKMLGGYLEFFMEPTVAEMY
                     QNLRRELDELFQSKLLNPKMDLQTHIDLISAVRLLIPVDKCSGGFVFNRQVLYNDSKP
                     YIASVPPPPPPVVSRIESGPGGDNSKGQLQTLLTRAGLPPPKYQTTQLANNQFRSVCE
                     FNGIQFMGHPCQTKKQAEKDAAAEALDRLNGANNLGSDFVGNMSSILKKSKKNPD"
     misc_feature    490..>2295
                     /gene="LOC139840025"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; Region: HrpA; COG1643"
                     /db_xref="CDD:441249"
     misc_feature    2362..2610
                     /gene="LOC139840025"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     Region: OB_NTP_bind; pfam07717"
                     /db_xref="CDD:400182"
     misc_feature    2956..3120
                     /gene="LOC139840025"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; Region: DSRM_SF; cd00048"
                     /db_xref="CDD:380679"
     misc_feature    order(2956..2961,2965..2967,3025..3027,3079..3087,
                     3094..3096)
                     /gene="LOC139840025"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:380679"
ORIGIN      
        1 tctgttatag attcttggaa gtcgaggcta acggcactcg tgaatagcca ggacaaacaa
       61 gagttagttt caagggaaaa aaaagacagg cgtgattatg aacaaatatc agccttggca
      121 actacaatgg gtttgcatag ccatttgtat accaaagtgc ttgttataag caaggttcct
      181 ttgccaaact atcgttttga tctagacgat aaacgccccc agagagaggt gtcattgccc
      241 ccgggattac taaagagtgt taatgatcat cttaaagaat atcttgcttt taaggctaag
      301 agtatgaacg gttctcgaga taatttttta tcaaaatgta gcaatggcat tatagttaat
      361 gaggacggga tttttgacca accagaacca cttatacgaa accatttggc aatggagaaa
      421 atcaatgggc taaggactgt gcaactgcgt accgagcaac aagcatggca ggcatctgca
      481 gacggtttta ggatgctaca gtttcggaat agcctccctg catacaaaga gaaagatgca
      541 atattggatc tcatttcaca aaatcaggtt gttatcatct caggtgaaac tggttgtgga
      601 aagacaactc agattcccca gttcatttta gaacaagaga ttgaatatat gcgtggggcc
      661 gcttgtaata tcatttgtac tcagccccga cgcatatctg ctatgtctgt gtctgaaaga
      721 gttgccgccg aaagagggga gaagttgggt gatactgttg gatataaagt tcgtttagaa
      781 ggtatgaaag gaagagatac tcgcctttta ttctgcacaa ctggaatttt attgagaaga
      841 ttactaattg atagggactt aaagggtgta actcatgtca ttgtagacga gattcacgaa
      901 cgtggcatga atgaagattt tttgcttatt gttcttaaag aactacttcc tcgtcgccca
      961 gaactacggg tcattttgat gagtgccacc ctggatgcaa atctcttttc gtcctacttt
     1021 aatggtgctc cattgctcca gattccgggt tttacgcacc ctgtgcattc ttattttctt
     1081 gaagatgttc tagaaattac tggatacaga ttaacgcaag aaaatcaaat cgatgattac
     1141 ggtcaagaaa gagcatggaa atcaaataag cagttcgtta aaaagagaaa aagtcaaatt
     1201 gcctcagctg ttgaggatgc gtttggagct gccaacttca tgtactacaa tcaacaaaca
     1261 cgggattcaa tgtcgtgttg gaatcccgat tccatgaatt ttaacctcat agaattctta
     1321 ctatgcagtc tttgtcttaa tcaaaagccc ggtgctattt tagtattttt gaccgggtgg
     1381 gatgacataa gttctttaaa ggacaaactt caagcacatt atcttttggg cgatacgggt
     1441 cgagtttggt tactcacatg tcatggttcc atggccagcg atgagcagag gttaatattt
     1501 gaaaggccgg tggatggggt gaggaagata gtattggcta caaatatggc cgaaacgagt
     1561 atcacaatag acgatgttgt ttttgttatc gattgtggta aagctaaaga gacaacatat
     1621 gatgctctta ataatactcc ttgtttgctt ccttcttgga tatcaaaggt ttctgcgaaa
     1681 caaagacgag gacgagcagg tcgtgttcag ccaggagagt gttaccattt gtatccgaga
     1741 tctgtttacg aagcgtttgc agaatatcaa ttacctgaaa tactaaggac tcctctccaa
     1801 tcgctttgtc ttcaaatcaa aagtttaaaa tttggaagta tttccgaatt cttatccaaa
     1861 gctttacagt cccccgagct attagcggtt caaaacgcca ttgagtacct caagattatc
     1921 ggtgcattag acgagagtga aaatctgact gtattaggtc gttttctaac attgcttccc
     1981 gttgaaccca aacttggaaa aatgcttata ctcggtgcaa ttcttaattg cttagacccg
     2041 attctcacaa ttgctgccgg tcttagcgtc cgagatcctt ttttagcacc tatagacaag
     2101 aaagatctgg cagaggcagc caaagcacaa ttttcacgcg attatagtga ccatcttgcc
     2161 cttgtaaggg catacgagag ttggaaagta gctgaacgcg agtataaggg atacgaatat
     2221 tgttggaata attttctttc ttatcagtcg atgaaagcta tcgattcttt gcgtagcgaa
     2281 tttcagacat tgttgtatgg tactggtctt attgacttta atataatcaa acacaacact
     2341 tggagttatg atgaaaatct cattcgagca gttatctgtt acggcttgta tcccggaatt
     2401 tgctctgtcg tgcacaatga gaagtcattt tcgctgaaaa ctatggagga cggtccagtt
     2461 catctacact ctaattcggt taatgcacgt gatcccaaaa ttccgtaccc atggttggtc
     2521 tttaacgaaa aggtcaaagt caactccatt tttcttagag attcaacagc agtttctgat
     2581 tcagtgttgt tattattcgg tggaagcatt tcaaaaggcg atatggatgg ccacgtgaaa
     2641 atgttagggg gatatttgga gttctttatg gagcccacag tagcagaaat gtatcaaaac
     2701 ttaagacgag agctcgatga attatttcag tctaaactac tgaatcccaa aatggattta
     2761 caaacccaca tcgatcttat atctgctgtt cgcttgctga ttccggtaga taaatgtagc
     2821 ggcggttttg tattcaaccg ccaggtacta tataacgatt cgaaaccgta tattgcatca
     2881 gtaccaccac caccgccacc tgtagtttcc cggatagaaa gtgggcccgg tggtgacaat
     2941 tcaaaaggtc aactccaaac attactaacc cgagcgggtt tgcccccacc aaaatatcaa
     3001 accacacaat tagcaaacaa ccagtttagg tcagtttgcg agttcaatgg catacaattt
     3061 atgggtcacc cttgccaaac caagaaacaa gccgaaaaag atgctgccgc cgaggcttta
     3121 gatcggctca acggtgcaaa taatctaggc agtgacttcg ttggtaatat gtcgtcgatc
     3181 ctcaagaaaa gcaagaagaa tcccgactag gatctagcgg caccctcttt tgttgattga
     3241 tgactgaatc gggtatttga ctatcttaaa gcaaaactgg ttgcaatagt taatcgcaac
     3301 cgttgctgta tgaatactag tggctgaaag tgaaccagat gtaatttttt tttgtatata
     3361 atgcaagtca ttagtgtaca attgtttgct tcagttgttt tttaattgcc tattgaatca
     3421 tcaatgatga tccatgaccc atataaatta catattctgc aaacgtactt ttgcttcatt
     3481 tgtcaaaaag ttgtagctag ttaactatct catatgcaac tat
//
LOCUS       XR_011757185            2503 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840026), ncRNA.
ACCESSION   XR_011757185
VERSION     XR_011757185.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2503
                     /gene="LOC139840026"
                     /note="uncharacterized LOC139840026; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840026"
     ncRNA           1..2503
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840026"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840026"
ORIGIN      
        1 tctccataag tgtaacattt gtctaagttt gtccataatg gttgatgtaa attataattg
       61 taaataatag tattgtatgc tgtaaatttt agtttctatc attttggcta gaaattgacg
      121 atagcagtca cgagagctta atttcatttt atgttttctt ttcttgtggg ttttgcattt
      181 gcgttgagaa gtggtacata atgccatttc aataattata tcagccaaag accgcattgt
      241 cgttcgccgt ttactttttt gccgtttttt aataaggaaa tagggttgga tcaattttgg
      301 cagcttccta tttgttatta taccctcgga attactgttc ctcccctacc tagtgcttac
      361 ttactgctgc ttaattattt tactccgtat aacatccacc tcaccgcttc gtttctcttt
      421 gttcatgcga ttagggtttt tcttttttgg ggtatgagcg attggggttt tttccgtttg
      481 gggcaccgat tagaaagatt cgttttttgt ttcttcaatt gtcattacta gttagggttt
      541 tcgaactctt gcggctgctg tcgtggccgc catgacatcc atccaggtta attttttcat
      601 ctatttttga tggttttggg aactcattga gattgttttg attcggtcat ggctccatcc
      661 gttcagtggt tgaatacaag aatagaagaa gagaatgttg tagcctgtgt tttttgatgc
      721 cacgactgtt gtgaatgctt tttaaggaaa aaaatgtatt tgcgtctcgc taattattct
      781 gtagtttgta gctatcatga accgtttttt taacctgact ttatgcatat acaataaaaa
      841 aatgtggcaa tgatgatcaa ttttttttgg tggaatagtt aacaaaattg aaacgcatac
      901 tggcgaggat gcgatttcat gttttctcag ttgacttaat atatagatct gagcttcagt
      961 ttgtttactg attattctgc ttctgtgatc agatgtgttg tatgaaaagt taatcaaaag
     1021 aggtgatgat gatcagtatg tatgtcacag gcataacttt taacaaaaag aaaaacttac
     1081 actacgaggc aatttatgga ttgcagccat gtacttttat ggtttcttca ttgattttat
     1141 acattgttat aaacaatgag caattgtgat tttgtatcat ggcggggcaa tctacggatt
     1201 gcagccatgc taattcatgg cctcttgctc gattttaaac gtatatttga gcctcatttt
     1261 atgatgtata ctttctgata ttggtgtaaa aagaaggctg ctaaacagtt tcatggaatt
     1321 gattcatatt ttggcgacac aacatgccgg ttgcagccat tatgtttcat gtagtgtaaa
     1381 cttttgcgtt tgtcgtgtta aatagccaaa caatgctttg tcgtatggtg gttggtcgtt
     1441 ggcatgttgt tgaatgtgca ggtgacggtc atggttttat cgatggtcac tatgatgatc
     1501 gctatcattc atggaatagg gtcacactat ggcaaggcaa cctatcagtt gcagccatta
     1561 tgacttaaca acttgaacta tggtatctta ataacatagc tatagtcatt gggcgtctta
     1621 gtccgcaaca accttatgct ttgccatgat taccattttt gttatccaca atttcaatgt
     1681 tttaaaaagt tttaaaatga gaggttgtga tgatggacat ctagaacctt gattgagtaa
     1741 tgaaaaaaag cagacaaatc ttggcggggc aacctataag ttgcagccat ggtgtttcat
     1801 attttcttct tgattctgca atgagaaaca tggatacata tcttggcgag gcaacgtata
     1861 agttgcagcc atgtcagtca atgacctctt gcttaaacat atacacacac ctgagcctta
     1921 tttttcttta cagcgtaggc attaagtttt ttttgtgttg caaccgccta tatctcggat
     1981 aactcagctc aagtgcagtc tatttcaggt ttctggatcg atatacaact gctttaccgc
     2041 gagaatttgc tactcatata aaaaaggtat aaatagatat tatcgagtta catcccaaaa
     2101 tattaggaat cgtttgctga ggcaggtgta atttttgcgg gttggtgact ttcagattga
     2161 cagaacattt ttatgaagtt acccttaata aggagcctcg attcgccctt gcctctacgc
     2221 gatttttatc taatgacaat gttgactagg aaaaaagcta agaaaaagtc tacaaactac
     2281 tcgcagtgcg gtgtgcaggt ttcaatcgat gaaattcgaa aaaaaacttg agcgcattaa
     2341 ttatttatag attatattgt gccctcggta tatttttgaa agttgatcta acaacacgta
     2401 aactcagaaa ccaaatgcat tacttttgtt atgtaactgg tgaaaacgag tttatgtata
     2461 tatttcgtct attaaaaaca tcccaaaaac gtagcaacgc ccg
//
LOCUS       XM_071830244             849 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X1, mRNA.
ACCESSION   XM_071830244
VERSION     XM_071830244.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..849
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     CDS             186..614
                     /gene="LOC139840027"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686345.1"
                     /db_xref="GeneID:139840027"
                     /translation="MIRYLNSRWTNEQVNLITDCVPDMVSVRICAVFLKLFHKKVCIH
                     YPLVCIFIIPEKEGTCSFELGLMFWFNKHSKQIVAKHWNRLIKQVLINHIGIFYMSTL
                     QLEIVYQGISLNSIILLGYNWCCVFHEDGKTRFLQGHYFW"
     polyA_site      849
                     /gene="LOC139840027"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 attgtgtacc agatatggtt tcggtacgta tttgtgctgt attccttaaa ttgtttcaca
      301 agaaggtatg tattcactac cccctggtat gtatttttat tattccagaa aaagaaggta
      361 cgtgttcatt cgaattaggg cttatgtttt ggtttaataa acattcgaaa cagatagttg
      421 caaaacattg gaaccgtctt attaaacagg ttttaataaa tcacattgga attttttata
      481 tgtcaactct tcaattggag attgtgtatc agggtatttc gttgaactcg atcattttgc
      541 tcggctacaa ctggtgttgc gtatttcatg aagatggaaa aacgagattc ttgcaaggtc
      601 attatttttg gtgatggagg gagtagtatg aacttgctat ggttaatgag gcctcagtaa
      661 tattattctg cataaacaat ggatgatgta ctatttgtac cccgataaat gatcttagaa
      721 gtacctatac ttctatgtgt ttttgcactt tttaaatttt acttgatagt tgatatgttg
      781 aattttgtta actctggtcg tttaggtgat gatattatag atgatattat atagttcgat
      841 gactgataa
//
LOCUS       XM_071830245             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X2, mRNA.
ACCESSION   XM_071830245
VERSION     XM_071830245.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     CDS             186..602
                     /gene="LOC139840027"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686346.1"
                     /db_xref="GeneID:139840027"
                     /translation="MIRYLNSRWTNEQVNLITDMVSVRICAVFLKLFHKKVCIHYPLV
                     CIFIIPEKEGTCSFELGLMFWFNKHSKQIVAKHWNRLIKQVLINHIGIFYMSTLQLEI
                     VYQGISLNSIILLGYNWCCVFHEDGKTRFLQGHYFW"
     polyA_site      837
                     /gene="LOC139840027"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 atatggtttc ggtacgtatt tgtgctgtat tccttaaatt gtttcacaag aaggtatgta
      301 ttcactaccc cctggtatgt atttttatta ttccagaaaa agaaggtacg tgttcattcg
      361 aattagggct tatgttttgg tttaataaac attcgaaaca gatagttgca aaacattgga
      421 accgtcttat taaacaggtt ttaataaatc acattggaat tttttatatg tcaactcttc
      481 aattggagat tgtgtatcag ggtatttcgt tgaactcgat cattttgctc ggctacaact
      541 ggtgttgcgt atttcatgaa gatggaaaaa cgagattctt gcaaggtcat tatttttggt
      601 gatggaggga gtagtatgaa cttgctatgg ttaatgaggc ctcagtaata ttattctgca
      661 taaacaatgg atgatgtact atttgtaccc cgataaatga tcttagaagt acctatactt
      721 ctatgtgttt ttgcactttt taaattttac ttgatagttg atatgttgaa ttttgttaac
      781 tctggtcgtt taggtgatga tattatagat gatattatat agttcgatga ctgataa
//
LOCUS       XM_071830246            1327 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X3, mRNA.
ACCESSION   XM_071830246
VERSION     XM_071830246.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1327
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     CDS             186..563
                     /gene="LOC139840027"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071686347.1"
                     /db_xref="GeneID:139840027"
                     /translation="MIRYLNSRWTNEQVNLITDCVPDMVSVRICAVFLKLFHKKVCIH
                     YPLVCIFIIPEKEGTCSFELGLMFWFNKHSKQIVAKHWNRLIKQVLINHIGIFYMSTL
                     QLEIVYQGISLNSIILLGYNWFA"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 attgtgtacc agatatggtt tcggtacgta tttgtgctgt attccttaaa ttgtttcaca
      301 agaaggtatg tattcactac cccctggtat gtatttttat tattccagaa aaagaaggta
      361 cgtgttcatt cgaattaggg cttatgtttt ggtttaataa acattcgaaa cagatagttg
      421 caaaacattg gaaccgtctt attaaacagg ttttaataaa tcacattgga attttttata
      481 tgtcaactct tcaattggag attgtgtatc agggtatttc gttgaactcg atcattttgc
      541 tcggctacaa ctggtttgct taatagttta tcaaagtcaa ataagtacat ttgtttgtaa
      601 gaaatacgac ttcatcgtat agaatcataa tccttgagaa acaatgatat aagtagtctt
      661 ttttttgttt gtttttaatg ctcgaagtct tgaattgtga aatacaatat gttacaaatc
      721 tgaatgtaat tttttgctcc atagtttttt atcgctctcg cgctcttaat cacagggtgt
      781 gaatcaaatt tgaagtgtat agtgatgttt gtaaattgta gctcgattat ttttttcatc
      841 gtgtaaatac attggcatag tacatggtaa acatatacat agtattactg ataggggagt
      901 ccctctttat gtatatcttt taaacttact gcgagattgg gtattgtttt aacaacgtat
      961 tattttatat tactatttta ttcggaggtt taatgctttt cgtagtgaac atgcgtttgg
     1021 cctgtttatg acctttctta gatttatttt tctaagaccc gcccaacgaa cacatattac
     1081 aagattattg gtcttagtta gaagccttgc gatcaacaac tgtatgagct ggtcagcatt
     1141 tttatttgtt gatgtcgtgt ctttaattgt ttatgctata tcgtttttga ttggcatagt
     1201 acattgagtt tttttatgtg gatcctttgt agatttgttc tttggtctcc ttacaacttt
     1261 atacgaagtc cctcaataat ccgataagct aatttttcat ataaatcata atatgcatat
     1321 tgtggca
//
LOCUS       XM_071830247             741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X4, mRNA.
ACCESSION   XM_071830247
VERSION     XM_071830247.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..741
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     CDS             186..506
                     /gene="LOC139840027"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071686348.1"
                     /db_xref="GeneID:139840027"
                     /translation="MIRYLNSRWTNEQVNLITEKEGTCSFELGLMFWFNKHSKQIVAK
                     HWNRLIKQVLINHIGIFYMSTLQLEIVYQGISLNSIILLGYNWCCVFHEDGKTRFLQG
                     HYFW"
     polyA_site      741
                     /gene="LOC139840027"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 aaaaagaagg tacgtgttca ttcgaattag ggcttatgtt ttggtttaat aaacattcga
      301 aacagatagt tgcaaaacat tggaaccgtc ttattaaaca ggttttaata aatcacattg
      361 gaatttttta tatgtcaact cttcaattgg agattgtgta tcagggtatt tcgttgaact
      421 cgatcatttt gctcggctac aactggtgtt gcgtatttca tgaagatgga aaaacgagat
      481 tcttgcaagg tcattatttt tggtgatgga gggagtagta tgaacttgct atggttaatg
      541 aggcctcagt aatattattc tgcataaaca atggatgatg tactatttgt accccgataa
      601 atgatcttag aagtacctat acttctatgt gtttttgcac tttttaaatt ttacttgata
      661 gttgatatgt tgaattttgt taactctggt cgtttaggtg atgatattat agatgatatt
      721 atatagttcg atgactgata a
//
LOCUS       XM_071830248             741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X5, mRNA.
ACCESSION   XM_071830248
VERSION     XM_071830248.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..741
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     CDS             186..506
                     /gene="LOC139840027"
                     /codon_start=1
                     /product="uncharacterized protein isoform X5"
                     /protein_id="XP_071686349.1"
                     /db_xref="GeneID:139840027"
                     /translation="MIRYLNSRWTNEQVNLITDCVPDMVSVRICAVFLKLFHKKIVAK
                     HWNRLIKQVLINHIGIFYMSTLQLEIVYQGISLNSIILLGYNWCCVFHEDGKTRFLQG
                     HYFW"
     polyA_site      741
                     /gene="LOC139840027"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 attgtgtacc agatatggtt tcggtacgta tttgtgctgt attccttaaa ttgtttcaca
      301 agaagatagt tgcaaaacat tggaaccgtc ttattaaaca ggttttaata aatcacattg
      361 gaatttttta tatgtcaact cttcaattgg agattgtgta tcagggtatt tcgttgaact
      421 cgatcatttt gctcggctac aactggtgtt gcgtatttca tgaagatgga aaaacgagat
      481 tcttgcaagg tcattatttt tggtgatgga gggagtagta tgaacttgct atggttaatg
      541 aggcctcagt aatattattc tgcataaaca atggatgatg tactatttgt accccgataa
      601 atgatcttag aagtacctat acttctatgt gtttttgcac tttttaaatt ttacttgata
      661 gttgatatgt tgaattttgt taactctggt cgtttaggtg atgatattat agatgatatt
      721 atatagttcg atgactgata a
//
LOCUS       XM_071830249             729 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X6, mRNA.
ACCESSION   XM_071830249
VERSION     XM_071830249.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..729
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     CDS             186..494
                     /gene="LOC139840027"
                     /codon_start=1
                     /product="uncharacterized protein isoform X6"
                     /protein_id="XP_071686350.1"
                     /db_xref="GeneID:139840027"
                     /translation="MIRYLNSRWTNEQVNLITDMVSVRICAVFLKLFHKKIVAKHWNR
                     LIKQVLINHIGIFYMSTLQLEIVYQGISLNSIILLGYNWCCVFHEDGKTRFLQGHYFW
                     "
     polyA_site      729
                     /gene="LOC139840027"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 atatggtttc ggtacgtatt tgtgctgtat tccttaaatt gtttcacaag aagatagttg
      301 caaaacattg gaaccgtctt attaaacagg ttttaataaa tcacattgga attttttata
      361 tgtcaactct tcaattggag attgtgtatc agggtatttc gttgaactcg atcattttgc
      421 tcggctacaa ctggtgttgc gtatttcatg aagatggaaa aacgagattc ttgcaaggtc
      481 attatttttg gtgatggagg gagtagtatg aacttgctat ggttaatgag gcctcagtaa
      541 tattattctg cataaacaat ggatgatgta ctatttgtac cccgataaat gatcttagaa
      601 gtacctatac ttctatgtgt ttttgcactt tttaaatttt acttgatagt tgatatgttg
      661 aattttgtta actctggtcg tttaggtgat gatattatag atgatattat atagttcgat
      721 gactgataa
//
LOCUS       XM_071830250             713 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X7, mRNA.
ACCESSION   XM_071830250
VERSION     XM_071830250.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..713
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     CDS             227..478
                     /gene="LOC139840027"
                     /codon_start=1
                     /product="uncharacterized protein isoform X7"
                     /protein_id="XP_071686351.1"
                     /db_xref="GeneID:139840027"
                     /translation="MVSVRICAVFLKLFHKKIVAKHWNRLIKQVLINHIGIFYMSTLQ
                     LEIVYQGISLNSIILLGYNWCCVFHEDGKTRFLQGHYFW"
     polyA_site      713
                     /gene="LOC139840027"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acagatatgg tttcggtacg
      241 tatttgtgct gtattcctta aattgtttca caagaagata gttgcaaaac attggaaccg
      301 tcttattaaa caggttttaa taaatcacat tggaattttt tatatgtcaa ctcttcaatt
      361 ggagattgtg tatcagggta tttcgttgaa ctcgatcatt ttgctcggct acaactggtg
      421 ttgcgtattt catgaagatg gaaaaacgag attcttgcaa ggtcattatt tttggtgatg
      481 gagggagtag tatgaacttg ctatggttaa tgaggcctca gtaatattat tctgcataaa
      541 caatggatga tgtactattt gtaccccgat aaatgatctt agaagtacct atacttctat
      601 gtgtttttgc actttttaaa ttttacttga tagttgatat gttgaatttt gttaactctg
      661 gtcgtttagg tgatgatatt atagatgata ttatatagtt cgatgactga taa
//
LOCUS       XM_071830251             725 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X8, mRNA.
ACCESSION   XM_071830251
VERSION     XM_071830251.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..725
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     CDS             239..490
                     /gene="LOC139840027"
                     /codon_start=1
                     /product="uncharacterized protein isoform X7"
                     /protein_id="XP_071686352.1"
                     /db_xref="GeneID:139840027"
                     /translation="MVSVRICAVFLKLFHKKIVAKHWNRLIKQVLINHIGIFYMSTLQ
                     LEIVYQGISLNSIILLGYNWCCVFHEDGKTRFLQGHYFW"
     polyA_site      725
                     /gene="LOC139840027"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acagattgtg taccagatat
      241 ggtttcggta cgtatttgtg ctgtattcct taaattgttt cacaagaaga tagttgcaaa
      301 acattggaac cgtcttatta aacaggtttt aataaatcac attggaattt tttatatgtc
      361 aactcttcaa ttggagattg tgtatcaggg tatttcgttg aactcgatca ttttgctcgg
      421 ctacaactgg tgttgcgtat ttcatgaaga tggaaaaacg agattcttgc aaggtcatta
      481 tttttggtga tggagggagt agtatgaact tgctatggtt aatgaggcct cagtaatatt
      541 attctgcata aacaatggat gatgtactat ttgtaccccg ataaatgatc ttagaagtac
      601 ctatacttct atgtgttttt gcacttttta aattttactt gatagttgat atgttgaatt
      661 ttgttaactc tggtcgttta ggtgatgata ttatagatga tattatatag ttcgatgact
      721 gataa
//
LOCUS       XR_011757186             882 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X9, misc_RNA.
ACCESSION   XR_011757186
VERSION     XR_011757186.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..882
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     misc_RNA        1..882
                     /gene="LOC139840027"
                     /product="uncharacterized protein, transcript variant X9"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840027"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 gtatactcta gctcttttat gtggtgtggt ttgctttatg tttttatgaa tcggtaatta
      301 gtagtgatgt aacacaagat ttcgctaatt tacttctcaa gttttaacat caataaagat
      361 tgtgtaccag atatggtttc gaaaaagaag gtacgtgttc attcgaatta gggcttatgt
      421 tttggtttaa taaacattcg aaacagatag ttgcaaaaca ttggaaccgt cttattaaac
      481 aggttttaat aaatcacatt ggaatttttt atatgtcaac tcttcaattg gagattgtgt
      541 atcagggtat ttcgttgaac tcgatcattt tgctcggcta caactggtgt tgcgtatttc
      601 atgaagatgg aaaaacgaga ttcttgcaag gtcattattt ttggtgatgg agggagtagt
      661 atgaacttgc tatggttaat gaggcctcag taatattatt ctgcataaac aatggatgat
      721 gtactatttg taccccgata aatgatctta gaagtaccta tacttctatg tgtttttgca
      781 ctttttaaat tttacttgat agttgatatg ttgaattttg ttaactctgg tcgtttaggt
      841 gatgatatta tagatgatat tatatagttc gatgactgat aa
//
LOCUS       XR_011757187             866 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X10, misc_RNA.
ACCESSION   XR_011757187
VERSION     XR_011757187.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..866
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     misc_RNA        1..866
                     /gene="LOC139840027"
                     /product="uncharacterized protein, transcript variant X10"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840027"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 ttttaacatc aataaagatt gtgtaccaga tatggtttcg gtacgtattt gtgctgtatt
      301 ccttaaattg tttcacaaga aggtatgtat tcactacccc ctggtatgta tttttattat
      361 tccagaaaaa gaaggtacgt gttcattcga attagggctt atgttttggt ttaataaaca
      421 ttcgaaacag atagttgcaa aacattggaa ccgtcttatt aaacaggttt taataaatca
      481 cattggaatt ttttatatgt caactcttca attggagatt gtgtatcagg gtatttcgtt
      541 gaactcgatc attttgctcg gctacaactg gtgttgcgta tttcatgaag atggaaaaac
      601 gagattcttg caaggtcatt atttttggtg atggagggag tagtatgaac ttgctatggt
      661 taatgaggcc tcagtaatat tattctgcat aaacaatgga tgatgtacta tttgtacccc
      721 gataaatgat cttagaagta cctatacttc tatgtgtttt tgcacttttt aaattttact
      781 tgatagttga tatgttgaat tttgttaact ctggtcgttt aggtgatgat attatagatg
      841 atattatata gttcgatgac tgataa
//
LOCUS       XR_011757188             781 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X11, misc_RNA.
ACCESSION   XR_011757188
VERSION     XR_011757188.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..781
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     misc_RNA        1..781
                     /gene="LOC139840027"
                     /product="uncharacterized protein, transcript variant X11"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840027"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 ttttaacatc aataaagatt gtgtaccaga tatggtttcg aaaaagaagg tacgtgttca
      301 ttcgaattag ggcttatgtt ttggtttaat aaacattcga aacagatagt tgcaaaacat
      361 tggaaccgtc ttattaaaca ggttttaata aatcacattg gaatttttta tatgtcaact
      421 cttcaattgg agattgtgta tcagggtatt tcgttgaact cgatcatttt gctcggctac
      481 aactggtgtt gcgtatttca tgaagatgga aaaacgagat tcttgcaagg tcattatttt
      541 tggtgatgga gggagtagta tgaacttgct atggttaatg aggcctcagt aatattattc
      601 tgcataaaca atggatgatg tactatttgt accccgataa atgatcttag aagtacctat
      661 acttctatgt gtttttgcac tttttaaatt ttacttgata gttgatatgt tgaattttgt
      721 taactctggt cgtttaggtg atgatattat agatgatatt atatagttcg atgactgata
      781 a
//
LOCUS       XR_011757189             764 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X12, misc_RNA.
ACCESSION   XR_011757189
VERSION     XR_011757189.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..764
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     misc_RNA        1..764
                     /gene="LOC139840027"
                     /product="uncharacterized protein, transcript variant X12"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840027"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acaggtgaat ttgataactg
      241 attgtgtacc agatatggtt tcgaaaaaga aggtacgtgt tcattcgaat tagggcttat
      301 gttttggttt aataaacatt cgaaacagat agttgcaaaa cattggaacc gtcttattaa
      361 acaggtttta ataaatcaca ttggaatttt ttatatgtca actcttcaat tggagattgt
      421 gtatcagggt atttcgttga actcgatcat tttgctcggc tacaactggt gttgcgtatt
      481 tcatgaagat ggaaaaacga gattcttgca aggtcattat ttttggtgat ggagggagta
      541 gtatgaactt gctatggtta atgaggcctc agtaatatta ttctgcataa acaatggatg
      601 atgtactatt tgtaccccga taaatgatct tagaagtacc tatacttcta tgtgtttttg
      661 cactttttaa attttacttg atagttgata tgttgaattt tgttaactct ggtcgtttag
      721 gtgatgatat tatagatgat attatatagt tcgatgactg ataa
//
LOCUS       XR_011757190             725 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840027), transcript variant X13, misc_RNA.
ACCESSION   XR_011757190
VERSION     XR_011757190.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..725
                     /gene="LOC139840027"
                     /note="uncharacterized LOC139840027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840027"
     misc_RNA        1..725
                     /gene="LOC139840027"
                     /product="uncharacterized protein, transcript variant X13"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840027"
ORIGIN      
        1 ccgctgcagt ttcttttaat ttcttcccct aatatcacag ccgatgtaat ttctttccta
       61 ccatccacta tccactatta atacacactt ccccaatcat gtatcattcc ttcaattcct
      121 ttatcccttc aatttgccct ataactgtag cacaaagctc tcaaatctag cgatgattct
      181 tgtggatgat cagatatttg aattcgagat ggacaaatga acagaaaaag aaggtacgtg
      241 ttcattcgaa ttagggctta tgttttggtt taataaacat tcgaaacaga tagttgcaaa
      301 acattggaac cgtcttatta aacaggtttt aataaatcac attggaattt tttatatgtc
      361 aactcttcaa ttggagattg tgtatcaggg tatttcgttg aactcgatca ttttgctcgg
      421 ctacaactgg tgttgcgtat ttcatgaaga tggaaaaacg agattcttgc aaggtcatta
      481 tttttggtga tggagggagt agtatgaact tgctatggtt aatgaggcct cagtaatatt
      541 attctgcata aacaatggat gatgtactat ttgtaccccg ataaatgatc ttagaagtac
      601 ctatacttct atgtgttttt gcacttttta aattttactt gatagttgat atgttgaatt
      661 ttgttaactc tggtcgttta ggtgatgata ttatagatga tattatatag ttcgatgact
      721 gataa
//
LOCUS       XM_071830252            2007 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides silicon efflux transporter
            LSI2-like (LOC139840028), mRNA.
ACCESSION   XM_071830252
VERSION     XM_071830252.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2007
                     /gene="LOC139840028"
                     /note="silicon efflux transporter LSI2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139840028"
     CDS             200..1771
                     /gene="LOC139840028"
                     /codon_start=1
                     /product="silicon efflux transporter LSI2-like"
                     /protein_id="XP_071686353.1"
                     /db_xref="GeneID:139840028"
                     /translation="MAMAPTVKVILGSFAFAVFWVLAVFPAVPFMPIGRTAGSLLGAM
                     LMVLFQVITPDQAYASIDLQILGLLFGTMVVSVYLERADMFKYLGKLLAYKSMGSKDL
                     LFRICLISAISSAFFTNDTSCVVLTEFVLKIARQQNLPPHPFLLALASSANIGSSATP
                     IGNPQNLVIAVQSKIPFGEFLFGNVSSMVIGVCVNAIILLAMFWKLLSVKKDEEEPPV
                     EVTPEEHVNSHRFSPATMSHMTSQNSHELNGHLEALSIQSSPGVNGTVEYTIRNRLGS
                     GDNEIIPKGVTDEKTLQKNDEKVVSRVSSNFDLGLEEIDEKSAKWKIEMWKIGVYVIT
                     VGMLISFLLGLNMSWTAITAALALVVLDFKDARPCLEKVSYSLLVFFCGMFVTVEGFN
                     RTGIPSAVWDFMEPYAQIDHISGIAILAVVIVILSNLASNVPTVLLLGARVAAAAATI
                     SPEKEKKAWLILAWVSTIAGNLSLLGSAANLIVCEQARRAQNFGYNLTFWAHLKFGVP
                     STIIVTAIGLTLIRA"
     misc_feature    200..1762
                     /gene="LOC139840028"
                     /note="Anion permease ArsB/NhaD. These permeases have been
                     shown to translocate sodium, arsenate, antimonite, sulfate
                     and organic anions across biological membranes in all
                     three kingdoms of life. A typical anion permease contains
                     8-13 transmembrane helices...; Region: ArsB_NhaD_permease;
                     cl21473"
                     /db_xref="CDD:473875"
     misc_feature    order(302..343,386..439,506..556,560..613,623..694,
                     758..802,1187..1225,1238..1282,1316..1372,1442..1489,
                     1574..1633,1718..1756)
                     /gene="LOC139840028"
                     /note="transmembrane helices; other site"
                     /db_xref="CDD:238537"
ORIGIN      
        1 caatttttta attgtttttt aagtgcacat gaattgcagc tcataaattg tctctttata
       61 catatacact cttgaatctt gatcttgttt actaagatta atatcttcat cttttaaatc
      121 caacaaggtg attgtattat taggtgaaat actagtaatt ggtgaaagtt agttataaag
      181 gttggtgctt tttgcaaaaa tggctatggc tccaactgta aaagtgatct tagggtcatt
      241 tgcatttgct gtattttggg ttttggctgt ttttcctgct gtaccattta tgcctattgg
      301 aagaacagca ggttctttac ttggtgctat gcttatggta ctttttcaag ttataacacc
      361 agatcaagct tatgcatcta ttgatctaca aatacttggt cttttatttg ggacaatggt
      421 tgtaagtgtt tatcttgaaa gagcagatat gtttaagtat ttaggtaaat tacttgcata
      481 taaaagcatg ggatctaaag atttactgtt tcgaatctgt ttaatatccg caatttcaag
      541 tgcttttttc acaaatgaca catcttgtgt tgtgttgact gagtttgtgc ttaaaattgc
      601 tagacaacaa aacctcccac cacatccatt tttgttagca cttgcgtcta gtgcgaatat
      661 tggttcatcc gctacaccga ttggtaaccc gcaaaatttg gttatcgcgg ttcaaagtaa
      721 gataccattt ggcgaatttt tgtttgggaa tgtatcatca atggttattg gagtttgtgt
      781 aaatgctata attttgttag ctatgttttg gaagctgtta tctgttaaga aagatgaaga
      841 agaaccgccg gttgaagtaa cgcctgaaga acatgtgaat tcgcatcgat tttcaccggc
      901 tacgatgtca catatgacgt cacaaaattc acatgaactt aatggtcatt tggaggccct
      961 tagtattcaa agctcgccag gtgttaatgg aaccgtagag tatacgatta ggaaccgttt
     1021 aggttcgggt gacaatgaaa ttataccaaa aggggttaca gacgaaaaga cgttgcagaa
     1081 gaatgacgaa aaagttgttt cgagggtttc atcaaatttt gatttgggtt tggaggaaat
     1141 tgatgaaaag tctgctaaat ggaaaataga aatgtggaaa ataggagttt atgttattac
     1201 agttggaatg ttgatttcgt ttttattggg attaaatatg tcatggactg caattacagc
     1261 tgcattggct ctcgtggttc ttgatttcaa ggacgctcgt ccgtgcttag aaaaggtatc
     1321 ttattcatta ttggtgttct tttgtgggat gtttgttacc gttgaaggct ttaacagaac
     1381 aggaatccca agtgctgtat gggatttcat ggaaccttat gctcaaatcg atcacattag
     1441 cggtatagca attcttgcgg ttgttatagt tattctatca aatcttgctt caaacgtgcc
     1501 aacagtacta ttgcttggcg caagggtggc agcagcagca gcaaccatat cacccgaaaa
     1561 ggagaagaaa gcatggctaa ttctggcctg ggtcagcact atagccggca atctttcgct
     1621 actagggtca gcagccaatt tgattgtctg cgaacaagct cgtcgtgctc aaaattttgg
     1681 gtacaatctt accttttggg ctcatctcaa gtttggtgtt ccatcaacta ttatagttac
     1741 agctattggt ttaacactta taagagcata aagctaggaa gaccatcttt tggatgtttc
     1801 attttcagtt ttttgtaaag aaatttgtaa gaacgatcac ttgtattttc actcaaagtg
     1861 tttatatata ggttttgttt ttggtctcaa tgaaaatggg cataagcaat aagtactccc
     1921 agagcccata ccatgtcttc ttgtaaatat gtatcgcctg ttacaaattc aatgcagttt
     1981 caaattcttt tttatgaaag ttggaat
//
LOCUS       XM_071830253            1350 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lipid phosphate phosphatase
            2-like (LOC139840029), mRNA.
ACCESSION   XM_071830253
VERSION     XM_071830253.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1350
                     /gene="LOC139840029"
                     /note="lipid phosphate phosphatase 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 43 Proteins"
                     /db_xref="GeneID:139840029"
     CDS             164..1168
                     /gene="LOC139840029"
                     /codon_start=1
                     /product="lipid phosphate phosphatase 2-like"
                     /protein_id="XP_071686354.1"
                     /db_xref="GeneID:139840029"
                     /translation="MQLNPLPFLRNMFLGGQESRVREVDLGAFYIKSHGSKLARTHMH
                     DWLILLLLVVIEIALNVIHPFYRFVGKDMMTDLKYPMKDNTVPVWSVPIYAVLLPIVV
                     FSFFYYRRGDVHDLHHAILGLLFAVLITGVLTDAIKDAVGRPRPDFFWRCFPDGVDDY
                     DKWGNVICHGNDKDIKEGHKSFPSGHASWSFAGLGFLALYLTAKIKVFDRRGHIAKLC
                     IIFLPLLMASLVAVSRVDDYWHHWQDVFAGGLLGLVVATMCYLQFFPAPYLSEGWGPY
                     AYFRALEETNSNSRVAPSVDGVGMEMPDIYQEPRRNGSHVFRQVSLSDSPLDVESGRM
                     "
     misc_feature    230..1144
                     /gene="LOC139840029"
                     /note="lipid phosphate phosphatase; Region: PLN02250"
                     /db_xref="CDD:215139"
ORIGIN      
        1 gaataaccaa cccccttcac tttaaattca tttaatccca ataatttata tttttggttt
       61 acatcgcgcc atttttagca aactttgtac ccgattgatc tttagatacc atcagatctt
      121 taagcaaata tatatttatt tgtaaataaa ggagttgaaa ataatgcagt tgaatccttt
      181 gcccttttta aggaatatgt ttctgggtgg acaagaaagc agagtacgag aagttgatct
      241 cggagcgttc tacattaagt ctcatggaag taaattggct aggactcaca tgcatgattg
      301 gcttatattg ctgctgcttg tcgtcataga aatcgctcta aacgttatac accctttcta
      361 tcgatttgtg ggcaaggata tgatgactga ccttaaatat cccatgaagg acaacaccgt
      421 tccggtttgg tctgttccca tttatgctgt tttgctgcct atcgttgtgt ttagcttctt
      481 ctattatagg aggggagatg tacatgattt gcaccatgca attctaggtc ttttgtttgc
      541 ggtgcttata accggggttt tgacggatgc tataaaagat gcagttggaa ggccacggcc
      601 cgatttcttt tggcgttgtt ttccagacgg agttgatgac tatgacaaat ggggcaatgt
      661 catatgtcat ggtaatgata aagatataaa agaaggccat aagagttttc ctagtggaca
      721 tgcttcgtgg tcgtttgcag gtttagggtt tctggcattg tacttgacgg caaaaattaa
      781 agtgtttgat cgtcggggtc atatagcaaa actatgcatt atttttcttc cgcttcttat
      841 ggcatctctc gtagcagttt ctagggtgga tgattattgg catcattggc aagatgtatt
      901 tgccggtggt cttttaggtc tagttgttgc cacaatgtgc tatctgcaat tttttccagc
      961 tccatatctc tctgaagggt ggggtccgta tgcttatttc cgagctttag aggagacaaa
     1021 ttcgaattca agagttgctc catcggttga tggggtcggt atggagatgc cggatatata
     1081 tcaagaacca aggcgaaatg gcagtcatgt gttcagacag gtgtcactct ctgattcgcc
     1141 tctagatgtg gaatctggaa gaatgtaacc tttggatgtc tatattgctc atatacattt
     1201 tgccaatttg ccaattccta tgtacagatt gtatttaatc tttgtagtct gaggaaacac
     1261 taaaggcatt attattatta cattttcatc ttctatatgg tgctagatat ttcatatatt
     1321 tgttacttgc tagaaagtgt gatatatagt
//
LOCUS       XM_071830254            1302 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gibberellin
            3-beta-dioxygenase 1-like (LOC139840030), mRNA.
ACCESSION   XM_071830254
VERSION     XM_071830254.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1302
                     /gene="LOC139840030"
                     /note="gibberellin 3-beta-dioxygenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 37 Proteins"
                     /db_xref="GeneID:139840030"
     CDS             119..1198
                     /gene="LOC139840030"
                     /codon_start=1
                     /product="gibberellin 3-beta-dioxygenase 1-like"
                     /protein_id="XP_071686355.1"
                     /db_xref="GeneID:139840030"
                     /translation="MSSKVLHTEKQHFDLNSIKELPESYAWTSMDDISPSSCRSEAIP
                     VINLEDPNVVMHVGHACKTWGVFQVTNHTIPMDLFDQMEASGRKLFSLPIQQKLKAAR
                     DPDGISGYGVARISSFFPKLMWSEGFTIIGSPYEHAQKLWPQDYRNFCEIIEEYKKQM
                     NILANTVMWRILESLGITKDDIKWASPSGDLKEACPALQLNSYPACPDPDRAMGLAAH
                     TDSTLLTILHQNNTSGLQVYREGMGWVTVPPVPGALVVNVGDLLHILSNGSYSSVLHR
                     VMVNRTQHRLSIAYLYGPPSNVQIKPLSKLIDNVHPALYRPVTWSEYLGTKAKHFNKA
                     LSLVRLCAPMNEFVDKNDHNSVLVG"
     misc_feature    152..1150
                     /gene="LOC139840030"
                     /note="gibberellin 3-beta-dioxygenase; Region: PLN02254"
                     /db_xref="CDD:215142"
ORIGIN      
        1 tacaagtgtt accaacaagt attcttacta ctatttctct cttcttctgt acaagaaatc
       61 attctatttt ccataatata tatattctcc tctttttgta tacaaactct aactcaatat
      121 gtcatcaaaa gtattacaca ccgaaaaaca acatttcgat ctaaattcga tcaaagagtt
      181 gccggaatca tatgcatgga catcaatgga tgatattagt ccttcctctt gtagatcaga
      241 ggccattcca gtaattaatc tggaagatcc aaacgttgtg atgcatgttg gtcatgcatg
      301 caaaacatgg ggtgtgtttc aagtcactaa ccatactatc cccatggatc tttttgatca
      361 aatggaagct tctggaagaa aactattttc tcttccaatt caacaaaaac taaaagctgc
      421 ccgggatccg gatggtattt cgggctacgg tgttgcccga atatcttcat tttttccaaa
      481 actcatgtgg tctgaagggt tcaccatcat tgggtcgcca tatgaacacg ctcaaaaact
      541 gtggccacaa gattacagaa atttctgtga gatcatcgaa gagtacaaga aacagatgaa
      601 cattttagcc aatacggtga tgtggcgaat acttgaatca ttaggaatta caaaggatga
      661 tataaaatgg gctagcccat caggcgacct aaaagaagca tgtccagcat tacagttaaa
      721 ttcttaccca gcttgtcccg acccagatcg agccatgggc cttgcagctc atacagattc
      781 aacccttctc acaattttgc accaaaacaa tacaagtgga ttgcaagtat acagggaagg
      841 aatgggttgg gtcacggtcc caccggtacc cggtgcactg gtagtaaatg taggtgactt
      901 gctacatata ctatcaaacg ggtcgtattc aagcgttctt catcgggtca tggttaacag
      961 aacccaacac cgtctttcta tagcttatct atacggcccg ccttcaaatg ttcaaattaa
     1021 acctttatca aaattgattg ataatgttca tcctgctctg taccggcccg ttacatggag
     1081 tgagtatcta ggtactaagg caaagcactt caataaggca ctttcgctcg ttcgattgtg
     1141 cgcacctatg aacgagtttg tagataagaa tgatcataat agtgtccttg ttggttgatc
     1201 aataaaatta atgtatcatt ttcatgatct attcgctttc gcaaggttat ttaaattcgt
     1261 ttgatgtgtt gacattagaa aacaaaaggg ggactaggag ga
//
LOCUS       XR_011757191            1606 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840031), transcript variant X1, ncRNA.
ACCESSION   XR_011757191
VERSION     XR_011757191.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1606
                     /gene="LOC139840031"
                     /note="uncharacterized LOC139840031; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840031"
     ncRNA           1..1606
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840031"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840031"
ORIGIN      
        1 aaaaaaaaaa aaccctaaac ctaaaaagta aaacaaccac caaatttcat ctccactgcc
       61 gacaatccat ggcgactaga acgttgttca gatctcttct gcttctattt ccgcctataa
      121 atctctactt tcagctcgtt ttttacggtg gatttatgta tcacaaccgt gtaatcacac
      181 aagaaaggtt ttacatgtgt tactgttcag ttacgtgttt ggattcactc tttactagtt
      241 tgaaagcatg gttacactat ttttgagttg cgaggaagta cgacacacct aattatgaca
      301 atggggggct cgataacaag attcatttgt atcgcggtga tacaacaaca ggacaaggct
      361 tggataagga tatcattttc cagtggatgg atgaagttag gagtggagaa agaggaggat
      421 gttttaataa gcaagatgga tatgatgata agaagaaata gtgagtatgt aaaatgttaa
      481 ggttctgagc ttcatttttt tattacattt cagcgacact ttttttttaa gttatatttt
      541 caaaaatggc ggttaaagga caaagtctgg ttgatcaaga ttccggtttg tcagattcgg
      601 ttgttcaata cttcaatata aacacacacg tatacactta agtaattatg tatatctaga
      661 atatatcatg gtgctatgtg tttaaaacga tcatttcata ttactttttt aaaatcatta
      721 ttagagctat tagcctatat atatcatggg gttatgtgtt ttaaactata gactttatta
      781 ctcactctgg cccgacaact catttttatg caaaaccatt tttacctgct attcaaaatg
      841 ttatcttttg atcatgtgtt ggtatccatg ataagtagct aggttcatgt ggtcatgcac
      901 ctaaatacgg cccttgtttt ttataattat agctagtcaa gaagtatttt atggttgtga
      961 tggtgttcta cagagaggtg gatctgatca aatcgattac caccttttaa ccaaacaaga
     1021 agcacacagg agaattgtac gggcatgttc ttggaacccg tttggtaacc aatttgccac
     1081 cggctccaaa gacaaaactg tcaaagattt gggggctgca gaaggaaaat taataatgac
     1141 ttttcctgat ttcaaaacta gtgttaccgc tctatcttgg acgggcctcc accgcgagaa
     1201 taacgacggg gttctcgccg ttggacccaa aagcgggctt attgagcttt ggagtatttc
     1261 tcttggaaaa agtgaacaag atttagcagt tttggtacca aatgcctctc ttgttataaa
     1321 atttgtcacg tttcgctggt gaatcgttta caatggagaa actcggagaa gaatgatgat
     1381 tatgcagctt gcttcttgtg gagctgatcg ctgttttaga gttttgaagt tagctttttt
     1441 atataagctg atgtggtttt cggttgctac taaattggca aagtttcaag ataaagtatc
     1501 tgaatagggc attaggtttt cactcttcgg gttgtccggt agggtgatta attttagtct
     1561 gatatacgtt gtctaattag atagttatgt tctttaacgt agtcga
//
LOCUS       XR_011757192            3055 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840031), transcript variant X2, ncRNA.
ACCESSION   XR_011757192
VERSION     XR_011757192.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3055
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3055
                     /gene="LOC139840031"
                     /note="uncharacterized LOC139840031; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840031"
     ncRNA           1..3055
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840031"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840031"
ORIGIN      
        1 aaaaaaaaaa aaccctaaac ctaaaaagta aaacaaccac caaatttcat ctccactgcc
       61 gacaatccat ggcgactaga acgttgttca gatctcttct gcttctattt ccgcctataa
      121 atctctactt tcagctcgtt ttttacggtg gatttatgta tcacaaccgt gtaatcacac
      181 aagaaaggtt ttacatgtgt tactgttcag ttacgtgttt ggattcactc tttactagtt
      241 tgaaagcatg gttacactat ttttgagttg cgaggaagta cgacacacct aattatgaca
      301 atggggggct cgataacaag attcatttgt atcgcggtga tacaacaaca ggacaaaata
      361 catatctttt aagaatgaaa tagtagttta taaaatcaca aataaaatat aatttttttt
      421 ttttaacaaa tataaaatgt aaaatcagta tcaaaatttt catattatgt accacgctgc
      481 tttagaggtt gttaagtatg aaatcaaatg atgtgtgttt gacttagttt gaaccgattt
      541 taatgatgtg agtgtggact agcaagtatt tgatcataat attcatattt ttattattca
      601 ttatcatctc cattaatcat attcataaac attgatcatc atcattctaa tcatcttcta
      661 ctaattgaac aagtgaatta aacatgaatt caaaattgaa caagtgaatt aaacatgaat
      721 tcaagcttga tatagattaa cttaagcttg atatggatta acaaagattc aaaaaaagct
      781 taattgctcc tcgttagttt gtataggaat ggtgttaggt ttggggaggt ttaccaaatt
      841 ttttgtaata tgaatgattt ttaaagcagt tagagttttt aggcacatta caccagaatg
      901 caggagtgat tcaccaaatt caaacccgca aggggaatgt cggaactgac agtaaggttg
      961 atcgtacgga ctttgttgat gattttagac tttgttgatg atttttgcga aggtgatggt
     1021 cttgagatcc acttgccatg tctgtgtatt tacaaattta tgatgatagt tcttgaatac
     1081 atgttaggtt gtgtggctaa tttgttgaac aattatgaac ttctgaatag aaatttgtta
     1141 acacacggtc ttggaaaatg gatcttaaca tcattatctt cgagaaaatt atctacagag
     1201 tctgtttgat catttccatc tttactgtcg ctttcggtac ttcctcttgc gggattaatt
     1261 ttggtaaatc attcctctat tctgctgtta tgtgcatata aacaccctaa ctacttaaaa
     1321 atgatctgca ttacaaacat ttggtaaagt tgttccacaa accaacacca ttccagtaca
     1381 aactaatgag cagagcagtt cacagttttt ttgaacctct gttaatctat atcaagcttg
     1441 aattcatctt taattcattt gttcgattgg tagcaggagt ttagaacgat gaatatgatc
     1501 atcattggag atgataatga taatagcttg aatctgaatc aattacgaac tggttggaaa
     1561 gaggtttcca gaatcacacc atagaaatat ggaaatcatg atcaaaggtt tgctagtttt
     1621 ataggtacaa aaaacactta catcactaaa atcgggtcaa attaagtcaa acatatatat
     1681 cacttaattt tggacttaac aacctctaaa gcagcttagt acataatatg gaagttctga
     1741 taccgacttt atatgtaatt tatattttat ttgtgattgt gattttataa acaaatatct
     1801 acaagggctt ggataaggat atcattttcc agtggatgga tgaagttagg agtggagaaa
     1861 gaggaggatg ttttaataag caagatggat atgatgataa gaagaaatag tgagtatgta
     1921 aaatgttaag gttctgagct tcattttttt attacatttc agcgacactt tttttttaag
     1981 ttatattttc aaaaatggcg gttaaaggac aaagtctggt tgatcaagat tccggtttgt
     2041 cagattcggt tgttcaatac ttcaatataa acacacacgt atacacttaa gtaattatgt
     2101 atatctagaa tatatcatgg tgctatgtgt ttaaaacgat catttcatat tactttttta
     2161 aaatcattat tagagctatt agcctatata tatcatgggg ttatgtgttt taaactatag
     2221 actttattac tcactctggc ccgacaactc atttttatgc aaaaccattt ttacctgcta
     2281 ttcaaaatgt tatcttttga tcatgtgttg gtatccatga taagtagcta ggttcatgtg
     2341 gtcatgcacc taaatacggc ccttgttttt tataattata gctagtcaag aagtatttta
     2401 tggttgtgat ggtgttctac agagaggtgg atctgatcaa atcgattacc accttttaac
     2461 caaacaagaa gcacacagga gaattgtacg ggcatgttct tggaacccgt ttggtaacca
     2521 atttgccacc ggctccaaag acaaaactgt caaagatttg ggggctgcag aaggaaaatt
     2581 aataatgact tttcctgatt tcaaaactag tgttaccgct ctatcttgga cgggcctcca
     2641 ccgcgagaat aacgacgggg ttctcgccgt tggacccaaa agcgggctta ttgagctttg
     2701 gagtatttct cttggaaaaa gtgaacaaga tttagcagtt ttggtaccaa atgcctctct
     2761 tgttataaaa tttgtcacgt ttcgctggtg aatcgtttac aatggagaaa ctcggagaag
     2821 aatgatgatt atgcagcttg cttcttgtgg agctgatcgc tgttttagag ttttgaagtt
     2881 agctttttta tataagctga tgtggttttc ggttgctact aaattggcaa agtttcaaga
     2941 taaagtatct gaatagggca ttaggttttc actcttcggg ttgtccggta gggtgattaa
     3001 ttttagtctg atatacgttg tctaattaga tagttatgtt ctttaacgta gtcga
//
LOCUS       XR_011757193            1583 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840031), transcript variant X3, ncRNA.
ACCESSION   XR_011757193
VERSION     XR_011757193.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1583
                     /gene="LOC139840031"
                     /note="uncharacterized LOC139840031; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840031"
     ncRNA           1..1583
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840031"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840031"
ORIGIN      
        1 cctaaaccta aaaagtaaaa caaccaccaa atttcatctc cactgccgac aatccatggc
       61 gactagaacg ttgttcagat ctcttctgct tctatttccg cctataaatc tctcgttttt
      121 tacggtggat ttatgtatca caaccgtgta atcacacaag aaaggtttta catgtgttac
      181 tgttcagtta cgtgtttgga ttcactcttt actagtttga aagcatggtt acactatttt
      241 tgagttgcga ggaagtacga cacacctaat tatgacaatg gggggctcga taacaagatt
      301 catttgtatc gcggtgatac aacaacagga caaggcttgg ataaggatat cattttccag
      361 tggatggatg aagttaggag tggagaaaga ggaggatgtt ttaataagca agatggatat
      421 gatgataaga agaaatagtg agtatgtaaa atgttaaggt tctgagcttc atttttttat
      481 tacatttcag cgacactttt tttttaagtt atattttcaa aaatggcggt taaaggacaa
      541 agtctggttg atcaagattc cggtttgtca gattcggttg ttcaatactt caatataaac
      601 acacacgtat acacttaagt aattatgtat atctagaata tatcatggtg ctatgtgttt
      661 aaaacgatca tttcatatta cttttttaaa atcattatta gagctattag cctatatata
      721 tcatggggtt atgtgtttta aactatagac tttattactc actctggccc gacaactcat
      781 ttttatgcaa aaccattttt acctgctatt caaaatgtta tcttttgatc atgtgttggt
      841 atccatgata agtagctagg ttcatgtggt catgcaccta aatacggccc ttgtttttta
      901 taattatagc tagtcaagaa gtattttatg gttgtgatgg tgttctacag agaggtggat
      961 ctgatcaaat cgattaccac cttttaacca aacaagaagc acacaggaga attgtacggg
     1021 catgttcttg gaacccgttt ggtaaccaat ttgccaccgg ctccaaagac aaaactgtca
     1081 aagatttggg ggctgcagaa ggaaaattaa taatgacttt tcctgatttc aaaactagtg
     1141 ttaccgctct atcttggacg ggcctccacc gcgagaataa cgacggggtt ctcgccgttg
     1201 gacccaaaag cgggcttatt gagctttgga gtatttctct tggaaaaagt gaacaagatt
     1261 tagcagtttt ggtaccaaat gcctctcttg ttataaaatt tgtcacgttt cgctggtgaa
     1321 tcgtttacaa tggagaaact cggagaagaa tgatgattat gcagcttgct tcttgtggag
     1381 ctgatcgctg ttttagagtt ttgaagttag cttttttata taagctgatg tggttttcgg
     1441 ttgctactaa attggcaaag tttcaagata aagtatctga atagggcatt aggttttcac
     1501 tcttcgggtt gtccggtagg gtgattaatt ttagtctgat atacgttgtc taattagata
     1561 gttatgttct ttaacgtagt cga
//
LOCUS       XR_011757194            2529 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840031), transcript variant X4, ncRNA.
ACCESSION   XR_011757194
VERSION     XR_011757194.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2529
                     /gene="LOC139840031"
                     /note="uncharacterized LOC139840031; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840031"
     ncRNA           1..2529
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840031"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840031"
ORIGIN      
        1 aaaaaaaaaa aaccctaaac ctaaaaagta aaacaaccac caaatttcat ctccactgcc
       61 gacaatccat ggcgactaga acgttgttca gatctcttct gcttctattt ccgcctataa
      121 atctctactt tcagctcgtt ttttacggtg gatttatgta tcacaaccgt gtaatcacac
      181 aagaaaggtt ttacatgtgt tactgttcag ttacgtgttt ggattcactc tttactagtt
      241 tgaaagcatg gttacactat ttttgagttg cgaggaagta cgacacacct aattatgaca
      301 atggggggct cgataacaag attcatttgt atcgcggtga tacaacaaca ggacaagcac
      361 attacaccag aatgcaggag tgattcacca aattcaaacc cgcaagggga atgtcggaac
      421 tgacagtaag gttgatcgta cggactttgt tgatgatttt agactttgtt gatgattttt
      481 gcgaaggtga tggtcttgag atccacttgc catgtctgtg tatttacaaa tttatgatga
      541 tagttcttga atacatgtta ggttgtgtgg ctaatttgtt gaacaattat gaacttctga
      601 atagaaattt gttaacacac ggtcttggaa aatggatctt aacatcatta tcttcgagaa
      661 aattatctac agagtctgtt tgatcatttc catctttact gtcgctttcg gtacttcctc
      721 ttgcgggatt aattttggta aatcattcct ctattctgct gttatgtgca tataaacacc
      781 ctaactactt aaaaatgatc tgcattacaa acatttggta aagttgttcc acaaaccaac
      841 accattccag tacaaactaa tgagcagagc agttcacagt ttttttgaac ctctgttaat
      901 ctatatcaag cttgaattca tctttaattc atttgttcga ttggtagcag gagtttagaa
      961 cgatgaatat gatcatcatt ggagatgata atgataatag cttgaatctg aatcaattac
     1021 gaactggttg gaaagaggtt tccagaatca caccatagaa atatggaaat catgatcaaa
     1081 ggtttgctag ttttataggt acaaaaaaca cttacatcac taaaatcggg tcaaattaag
     1141 tcaaacatat atatcactta attttggact taacaacctc taaagcagct tagtacataa
     1201 tatggaagtt ctgataccga ctttatatgt aatttatatt ttatttgtga ttgtgatttt
     1261 ataaacaaat atctacaagg gcttggataa ggatatcatt ttccagtgga tggatgaagt
     1321 taggagtgga gaaagaggag gatgttttaa taagcaagat ggatatgatg ataagaagaa
     1381 atagtgagta tgtaaaatgt taaggttctg agcttcattt ttttattaca tttcagcgac
     1441 actttttttt taagttatat tttcaaaaat ggcggttaaa ggacaaagtc tggttgatca
     1501 agattccggt ttgtcagatt cggttgttca atacttcaat ataaacacac acgtatacac
     1561 ttaagtaatt atgtatatct agaatatatc atggtgctat gtgtttaaaa cgatcatttc
     1621 atattacttt tttaaaatca ttattagagc tattagccta tatatatcat ggggttatgt
     1681 gttttaaact atagacttta ttactcactc tggcccgaca actcattttt atgcaaaacc
     1741 atttttacct gctattcaaa atgttatctt ttgatcatgt gttggtatcc atgataagta
     1801 gctaggttca tgtggtcatg cacctaaata cggcccttgt tttttataat tatagctagt
     1861 caagaagtat tttatggttg tgatggtgtt ctacagagag gtggatctga tcaaatcgat
     1921 taccaccttt taaccaaaca agaagcacac aggagaattg tacgggcatg ttcttggaac
     1981 ccgtttggta accaatttgc caccggctcc aaagacaaaa ctgtcaaaga tttgggggct
     2041 gcagaaggaa aattaataat gacttttcct gatttcaaaa ctagtgttac cgctctatct
     2101 tggacgggcc tccaccgcga gaataacgac ggggttctcg ccgttggacc caaaagcggg
     2161 cttattgagc tttggagtat ttctcttgga aaaagtgaac aagatttagc agttttggta
     2221 ccaaatgcct ctcttgttat aaaatttgtc acgtttcgct ggtgaatcgt ttacaatgga
     2281 gaaactcgga gaagaatgat gattatgcag cttgcttctt gtggagctga tcgctgtttt
     2341 agagttttga agttagcttt tttatataag ctgatgtggt tttcggttgc tactaaattg
     2401 gcaaagtttc aagataaagt atctgaatag ggcattaggt tttcactctt cgggttgtcc
     2461 ggtagggtga ttaattttag tctgatatac gttgtctaat tagatagtta tgttctttaa
     2521 cgtagtcga
//
LOCUS       XR_011757195            1500 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840031), transcript variant X5, ncRNA.
ACCESSION   XR_011757195
VERSION     XR_011757195.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1500
                     /gene="LOC139840031"
                     /note="uncharacterized LOC139840031; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840031"
     ncRNA           1..1500
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840031"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840031"
ORIGIN      
        1 ctaaaaagta aaacaaccac caaatttcat ctccactgcc gacaatccat ggcgactaga
       61 acgttgttca gatctcttct gcttctattt ccgcctataa atctttacgt gtttggattc
      121 actctttact agtttgaaag catggttaca ctatttttga gttgcgagga agtacgacac
      181 acctaattat gacaatgggg ggctcgataa caagattcat ttgtatcgcg gtgatacaac
      241 aacaggacaa ggcttggata aggatatcat tttccagtgg atggatgaag ttaggagtgg
      301 agaaagagga ggatgtttta ataagcaaga tggatatgat gataagaaga aatagtgagt
      361 atgtaaaatg ttaaggttct gagcttcatt tttttattac atttcagcga cacttttttt
      421 ttaagttata ttttcaaaaa tggcggttaa aggacaaagt ctggttgatc aagattccgg
      481 tttgtcagat tcggttgttc aatacttcaa tataaacaca cacgtataca cttaagtaat
      541 tatgtatatc tagaatatat catggtgcta tgtgtttaaa acgatcattt catattactt
      601 ttttaaaatc attattagag ctattagcct atatatatca tggggttatg tgttttaaac
      661 tatagacttt attactcact ctggcccgac aactcatttt tatgcaaaac catttttacc
      721 tgctattcaa aatgttatct tttgatcatg tgttggtatc catgataagt agctaggttc
      781 atgtggtcat gcacctaaat acggcccttg ttttttataa ttatagctag tcaagaagta
      841 ttttatggtt gtgatggtgt tctacagaga ggtggatctg atcaaatcga ttaccacctt
      901 ttaaccaaac aagaagcaca caggagaatt gtacgggcat gttcttggaa cccgtttggt
      961 aaccaatttg ccaccggctc caaagacaaa actgtcaaag atttgggggc tgcagaagga
     1021 aaattaataa tgacttttcc tgatttcaaa actagtgtta ccgctctatc ttggacgggc
     1081 ctccaccgcg agaataacga cggggttctc gccgttggac ccaaaagcgg gcttattgag
     1141 ctttggagta tttctcttgg aaaaagtgaa caagatttag cagttttggt accaaatgcc
     1201 tctcttgtta taaaatttgt cacgtttcgc tggtgaatcg tttacaatgg agaaactcgg
     1261 agaagaatga tgattatgca gcttgcttct tgtggagctg atcgctgttt tagagttttg
     1321 aagttagctt ttttatataa gctgatgtgg ttttcggttg ctactaaatt ggcaaagttt
     1381 caagataaag tatctgaata gggcattagg ttttcactct tcgggttgtc cggtagggtg
     1441 attaatttta gtctgatata cgttgtctaa ttagatagtt atgttcttta acgtagtcga
//
LOCUS       XM_071830255            3243 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin response factor
            2A-like (LOC139840032), mRNA.
ACCESSION   XM_071830255
VERSION     XM_071830255.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3243
                     /gene="LOC139840032"
                     /note="auxin response factor 2A-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 47
                     Proteins"
                     /db_xref="GeneID:139840032"
     CDS             635..3016
                     /gene="LOC139840032"
                     /codon_start=1
                     /product="auxin response factor 2A-like"
                     /protein_id="XP_071686356.1"
                     /db_xref="GeneID:139840032"
                     /translation="MTSSEVSSNNKNKITNNNSMRADRDTFSLSNFSDKNDDVSDSDR
                     AVSGVGKGDADTALYKELWRACAGPLVTVPQENDLVFYFPQGHIEQVEASTHQVAEQQ
                     MPMYNLPSKILCRVMNVQLRAELETDEVFSQITLMPEPNQDENAVKKEPAQPAQTRFH
                     VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELIAKDLHGNEWRFRH
                     IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQANVPSSV
                     ISSHSMHLGVLATAWHAIQTGTIFTVYYKPRTSPAEFIVPYDQYMESIKNNYSIGMRF
                     KMKFEGEEAPEQRFTGTIVGVEESDPKSWPESKWRCLKVRWDETSIIPRPDRVSPWKI
                     EPALAISPLAVHKQKKPRSSMLPSAPDSSPLTRECSSRANPADPLPASSLSRVLQGQE
                     LSASRINESDSCARPIHWPSSVIDDSKTDHVSVSQRYGTDKISSYARPAESSFTDLLS
                     GFGSHNNQADGKFIIQSNPWSKMPSNLALNLMGSTMKGVFGDDFVNQRGNKQQHVSWL
                     MPPPLPSYFHTPKSPLVQQNDVRKPEDGNCKIFGVPLGGNKVALDTTVNAPQELQLQQ
                     YPSFESNQRSEQSTGQKVISNLPVGQEREKHNQNSQLPTKVQGISSRSCTKVHKQGIA
                     LGRSLDLTKFNNYDELIAELDELFEFNGELISRNKTWLVVYTDDEGDMMLVGDDPWNE
                     FCGMVRKIYIYTREEVQRMNLGTINSRGEDNSSVAEGVDARGNLPSSSSPEHA"
     misc_feature    1124..1429
                     /gene="LOC139840032"
                     /note="B3 DNA binding domain; Region: B3; pfam02362"
                     /db_xref="CDD:396783"
     misc_feature    order(1130..1132,1139..1141,1163..1165,1172..1174,
                     1178..1180,1283..1285,1316..1318,1322..1327,1331..1336)
                     /gene="LOC139840032"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:197383"
     misc_feature    1502..1750
                     /gene="LOC139840032"
                     /note="Auxin response factor; Region: Auxin_resp;
                     pfam06507"
                     /db_xref="CDD:428981"
     misc_feature    <2603..2884
                     /gene="LOC139840032"
                     /note="AUX/IAA family; Region: AUX_IAA; pfam02309"
                     /db_xref="CDD:460529"
ORIGIN      
        1 ttgaaattac tgcaaacaca cagttttcaa tttagtccta caaccaatca acaatatctt
       61 gtttttctct gagcactata atgatttagg gagataaatg aattctgatt gctgatgtag
      121 atgtgtcgga acctgtttcg tgttgaatat gctcaaatgg ttcagtttta caggtctatt
      181 ttctgaaaaa ttgaggtttt atgtggtcaa ttacgggtga ttttacggtt tctgaagctg
      241 ttttctgttg aatatgctga tttggtgcag ttttaattgt gttttgaact gaattgaggc
      301 gatctgtggt gattaccggt tgaattctag ggttttggtg acaatttact gttgcgaaag
      361 cggtattgcg ttgaatttgt tcatttgatg cagttaaagg cctttgttgt gatgaaaggt
      421 taaattatag ggttatgaac gaatttacgt ttaattttag ggttttattg aaattaacgg
      481 tttcggaagc tgtttgatgc agttttacag tcgttttgaa ctcaattaca gttgatctgt
      541 ggtaattaaa gttagaagtc tagggtttag tgagtatgat tatgtggttt tagataaaaa
      601 actgtgttta aagccaatca attattgtag ttaaatgaca tcatcagaag tttcaagcaa
      661 taataaaaat aaaattacta ataataatag tatgagagca gatagggaca cgttttcgct
      721 atctaatttt agcgacaaaa acgacgatgt tagtgattcg gatcgagcgg tttccggtgt
      781 cggaaaaggt gatgcagata ctgctctgta taaggaacta tggcgagctt gtgctggtcc
      841 tctggttacg gttcctcagg aaaatgatct agtgttttat tttcctcaag gacacataga
      901 acaggttgag gcttcaaccc atcaagttgc agaacaacaa atgccaatgt ataaccttcc
      961 atcaaagatc ctttgccgtg ttatgaacgt gcaattaagg gcggaattag agacagatga
     1021 ggtgttttcg caaataactt tgatgccgga acctaatcaa gatgagaatg cagtgaaaaa
     1081 ggaaccagca caacccgccc aaactcgatt tcatgtgcat tcgttttgca agacgttgac
     1141 tgcttctgat acgagtactc atggtgggtt ttctgttctg agacgccatg ctgatgaatg
     1201 tcttcctcca ctggacatgt caaggcaacc tccaacacaa gagctcatag ccaaggattt
     1261 gcatggaaac gagtggcgct tcaggcacat atttcggggt caaccaagaa ggcatctgct
     1321 tcaaagtggt tggagtgtct ttgttagctc taaaaggcta gtggctggtg atgcctttat
     1381 atttctaaga ggtgaaaacg gagagcttcg tgtgggggta agacgtgcaa tgagacagca
     1441 ggcaaacgtc ccatcttctg tcatatctag tcatagcatg catcttggag tgcttgcaac
     1501 tgcttggcat gccattcaga ccggaacgat atttaccgtc tattacaagc ctaggactag
     1561 ccctgcagag ttcattgttc catatgatca gtacatggag tctattaaga acaactactc
     1621 catagggatg agattcaaaa tgaagtttga aggtgaagaa gctccagagc aaagatttac
     1681 tggaactata gttggggttg aagagtctga tccgaaaagc tggcccgaat ctaagtggag
     1741 atgcctgaag gtacggtggg atgaaacatc gattattcct cgtcccgata gagtttcacc
     1801 ttggaaaata gaacccgctc tcgcaataag tccacttgct gtgcataaac agaaaaagcc
     1861 tcgttcaagc atgttgcctt cagcgcctga ttcttctcct cttacaagag aatgttcatc
     1921 aagagccaat ccagcagacc ctttaccagc aagttcactt tcaagggttt tgcaaggaca
     1981 agaattatcg gcttcaagaa ttaacgagtc agattcatgt gctaggccca ttcactggcc
     2041 atcatcagta atagatgatt caaaaaccga tcatgtttcg gtgtctcaac gttacgggac
     2101 ggataaaatt tcatcctatg caaggcctgc agaatcttct tttacagatc tattatcagg
     2161 ttttgggtcc cacaacaatc aagctgatgg aaaatttatc atacagtcaa acccgtggtc
     2221 aaaaatgcca tccaacctag cccttaacct gatgggctca accatgaaag gtgtttttgg
     2281 cgatgatttt gttaaccaaa ggggcaacaa gcagcaacat gtaagttggc tgatgccgcc
     2341 accacttcct tcgtattttc atacgccaaa atctccactg gttcagcaaa atgatgtgag
     2401 gaagcccgaa gacggaaatt gcaaaatatt tggtgtaccc ctagggggta ataaggttgc
     2461 gttagacaca acagttaatg cacctcaaga gttgcaatta caacaatacc cctcattcga
     2521 atctaatcag agatctgaac aatccacagg tcaaaaagta attagtaatc taccagttgg
     2581 tcaagaacga gagaagcata atcaaaactc ccagctacca acgaaagtcc agggaatttc
     2641 atcaaggagc tgcacaaagg ttcataagca agggatcgcc cttggtaggt ctctggatct
     2701 taccaagttc aacaactatg atgaattaat tgctgaatta gacgaattat ttgaattcaa
     2761 tggagagctt atatccagaa acaagacttg gctggttgta tacacagatg atgagggtga
     2821 catgatgctt gttggagatg atccgtggaa tgaattctgt ggcatggtgc gaaagatata
     2881 tatttatact agagaagagg tgcagcggat gaatcttggt acgataaatt cacggggcga
     2941 agacaattca tcagtcgcag aaggtgttga tgccaggggg aatcttccat catcttccag
     3001 tcctgagcat gcgtaggttt ttattactgt atctaggtat atgtttatat aggtggatag
     3061 ggattatgat atttattata agtatggagt tgtattgtat ataggtgata ttgggagtat
     3121 cccattatgt acaaagggtg tttttgcttt cttctagctt gttccactct atttaatgta
     3181 aggagaaagt tattgaatat taatggaggc tcagtttatg tgataaaact ttgtacagta
     3241 tat
//
LOCUS       XM_071830256            2263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides coiled-coil
            domain-containing protein SCD2-like (LOC139840033), mRNA.
ACCESSION   XM_071830256
VERSION     XM_071830256.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2263
                     /gene="LOC139840033"
                     /note="coiled-coil domain-containing protein SCD2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139840033"
     CDS             218..1918
                     /gene="LOC139840033"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein SCD2-like"
                     /protein_id="XP_071686357.1"
                     /db_xref="GeneID:139840033"
                     /translation="MDRKRTESPVYTRQWSGDSSSTGSSSPMRSPAHPQSRLSQPTGG
                     YSTIKRTQNVAAKAAAQRLAQVMASQTTTNDDDDDDDDDDDDEGFQFANPTSFGTKSN
                     GSRTGGLSGVSFGKPNRSPSPALGRNFMEHTISNRSTSAGRPSVSVRTGPVVPPVPNR
                     STLRHHSTIPSQIEPPNRNRERRFTDIGHGGRDMGDQHEASALRDELDMLQEEHDIVT
                     DELRRVEEKREEAEARARELEKQVASLGEGVSLEAKLLSRKEAAIRQREAALKAAQQT
                     KDGRDVEVSNLRAELENLKDETIGAMEQLKEAESEAKALSTMTQRMVLTHEEMEEVVL
                     KRCWLSRYWGLAVQHGICADIAGAKHEHWSSFAPLPFEVVISAGQKAKESSWHDGDDV
                     SDRRKLVRDINDLTGEGNIESMLSVEMGLREMASLKVEDAVVLAMAQQRRPNLVRQSV
                     ADPKSPGDPKFVEGFELSLVEAEDVSFKEAWLTYFWRRAKVHGVEEDIAEDRLHFWIS
                     RSATSPTSHDAVDVERGLTELRKLGIEQQLWEASRREIDQSSSLAVDDLIVSAEEDAP
                     "
     misc_feature    <971..>1216
                     /gene="LOC139840033"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpA; COG0542"
                     /db_xref="CDD:440308"
     polyA_site      2263
                     /gene="LOC139840033"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtacttcac acttcacgcc gtttcaacgc cgtaatcatg tcgaccggat ctccgtcata
       61 aaaaaaaaaa ccaatacgaa ttccactcat ctctcctcaa attcctgatt ccagaaattt
      121 agcaatttta acaaaattaa cgcttgattt ttcaaaattc acaccataaa ttgacttaat
      181 ttgatcgcag tttcatataa atacgttcaa atcctatatg gatcggaaac ggaccgagag
      241 tccggtttat acacggcaat ggagcggcga ttcaagcagc accggctcat catcaccgat
      301 gagatctccg gctcatcctc aatcaaggtt aagtcaaccg actggtggtt attctactat
      361 taaacgaact caaaatgttg ccgcgaaagc tgctgctcaa cgtttagcgc aagttatggc
      421 ctcacaaact actactaatg atgatgacga tgatgacgat gacgatgacg atgacgaagg
      481 gtttcaattt gctaatccga cgtcgtttgg tactaaaagt aacggtagta ggactggtgg
      541 tttgtctggt gtttcctttg gtaaacctaa cagatcacct tcacctgcgt taggtcggaa
      601 ctttatggag cacactattt ctaatcgttc tacgtcagcc gggaggccgt cagtatccgt
      661 acgcacagga ccagtggtgc ctccagttcc aaacagatca actttgagac accatagtac
      721 cattccgtcc caaatagaac ctccaaatag aaatagagaa agaaggttta cggatattgg
      781 acacggaggc agagatatgg gagatcagca tgaggcatct gcacttcgtg atgaactcga
      841 tatgttacaa gaagagcatg acatcgttac agatgagctt cgtcgtgttg aagaaaaacg
      901 tgaagaagca gaggctaggg caagggagct ggagaaacag gtggcttctc taggagaagg
      961 agtatccttg gaggccaagt tgttgagcag gaaagaagct gcaatacgac aaagagaagc
     1021 tgctcttaaa gctgcccaac agacaaaaga tggaagagat gtggaagttt ctaatcttcg
     1081 tgcagaactt gagaacttaa aagatgagac aattggtgcc atggagcagc tcaaggaagc
     1141 cgaatctgaa gcaaaagctc tttccaccat gacacagagg atggttttga ctcatgaaga
     1201 gatggaggag gtagttctaa agaggtgttg gctttctcgt tattggggtt tagctgtaca
     1261 acatggtata tgtgccgaca tagcgggagc aaagcatgag cattggtcat cgtttgcacc
     1321 tttaccattt gaagttgtaa tttcagctgg acaaaaggca aaggagtcgt cttggcatga
     1381 tggtgatgat gtttctgata gaagaaaact tgtccgtgat atcaatgacc taacagggga
     1441 agggaatatt gagagtatgc tttcagttga gatgggtttg agggaaatgg catccttgaa
     1501 ggtagaagat gctgttgtac ttgcaatggc tcagcaacgt cgtccaaatt tagtccggca
     1561 atctgttgct gatccaaaat cgccaggtga tcccaagttt gtggagggat tcgagttgag
     1621 tctcgtagag gctgaagatg tttcttttaa agaggcgtgg cttacatatt tttggagaag
     1681 agccaaagtt catggtgtag aggaagatat tgctgaagat agacttcact tttggataag
     1741 ccggagtgca acgtctccta cttctcatga tgctgttgat gttgaacgag ggttaacgga
     1801 gttgaggaaa ctggggatag aacaacagct ttgggaagca tctcgccggg aaatagacca
     1861 gtcatcttca ttagcagttg acgatctcat agtgtctgcc gaagaagatg ctccctagtg
     1921 attataattt atttcagtta atttatcttt cttctttcca aaaatggaaa gaaaaaaaaa
     1981 agaaaaaaaa acaaaatttt gctgtttaga atgtcaatag atggactgtg agtttgtgca
     2041 agttttcttg ttgctgtata ataaattgga tggtatagaa tcatagatag atacttgata
     2101 gttacagtat caaaatattc aattatttgg acgaatctat ctcattgtgt gatcctaaga
     2161 tgatgaatga aatggcagat gtacagaagt ggctgctgta ggttggttgt ttgtggctta
     2221 tttaataaga tggtttattt tctaagttat tagacttcgt ttt
//
LOCUS       XM_071830257            1519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphoserine
            aminotransferase 2, chloroplastic-like (LOC139840034), mRNA.
ACCESSION   XM_071830257
VERSION     XM_071830257.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1519
                     /gene="LOC139840034"
                     /note="phosphoserine aminotransferase 2,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139840034"
     CDS             17..1285
                     /gene="LOC139840034"
                     /codon_start=1
                     /product="phosphoserine aminotransferase 2,
                     chloroplastic-like"
                     /protein_id="XP_071686358.1"
                     /db_xref="GeneID:139840034"
                     /translation="MAMSATNTPQTLLLKNTNIFKPSITTTTTTLPISRVTTRKPLSI
                     TCSVSAATAAVAPPTSDRVFNFAAGPATLPEIVLRKAESELYNWRGAGMSVMEMSHRG
                     KEFLSIIQKAESDLRKLLTISDDYVVLFLQGGATTQFAGIPLNICKPTDPVDYIVTGS
                     WGDKAYKEATKYCKPNVIWSGKSDKYTTIPKFENLEQNMQARYLHICANETIHGVEFK
                     DYPTPNNKDGLLIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGN
                     AQEITPVMLDYKIHADNDSLYNTPPCYGIYMCGLVFEDLLAQGGLVEVEKKNVKKAQI
                     LYDAIDGSGGFYRCPVEKSVRSLMNVPFTLEKSELEAEFVKEAAAEKMVQLKGHRSVG
                     GMRASIYNAMPLAGVEKLVEFMKKFQAKHG"
     misc_feature    197..1279
                     /gene="LOC139840034"
                     /note="phosphoserine transaminase; Region: PLN02452"
                     /db_xref="CDD:178071"
     misc_feature    order(209..211,224..229,233..235,410..415,422..424,
                     518..520,527..532,800..802,908..916)
                     /gene="LOC139840034"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99736"
     misc_feature    order(218..220,419..424,497..499,647..649,713..715,
                     782..787,1178..1180)
                     /gene="LOC139840034"
                     /note="substrate-cofactor binding pocket [active]"
                     /db_xref="CDD:99736"
     misc_feature    order(416..424,497..499,647..649,713..715,719..721,
                     782..787)
                     /gene="LOC139840034"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:99736"
     misc_feature    785..787
                     /gene="LOC139840034"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99736"
     polyA_site      1519
                     /gene="LOC139840034"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaatcagca gcaacaatgg caatgtcagc caccaacacc ccacaaaccc tcctcctcaa
       61 aaacactaac atcttcaaac cctcaataac taccacaacc accaccctcc caatctcacg
      121 cgtcaccacc agaaaacccc tctcaatcac atgctctgtt tccgccgcca ccgccgccgt
      181 cgccccaccc acctccgacc gcgttttcaa tttcgccgcc ggtcccgcca ccctcccgga
      241 aatcgtcctc cgtaaagccg aatctgagct ctacaactgg cgtggggccg gcatgagtgt
      301 catggaaatg agtcatagag gaaaagaatt cctttcaatt attcaaaaag ctgaatcaga
      361 tctgagaaaa cttctaacca tctccgatga ttacgtcgtt ttgtttcttc aaggcggcgc
      421 caccacccag ttcgccggaa tcccattaaa tatttgtaaa cctaccgatc cggttgatta
      481 tattgttact ggatcatggg gtgataaagc ttataaagaa gcaactaaat actgtaaacc
      541 taatgtgatt tggtcaggta aatctgataa atacacaacg attccaaaat ttgaaaactt
      601 ggaacaaaat atgcaggcaa ggtatttgca tatatgcgcc aatgaaacta ttcatggtgt
      661 tgagtttaaa gattacccaa cacctaataa caaagatggg ttgttgattg ctgacatgtc
      721 atccaatttt tgttcgaaac cggttgatgt gtcgaaattt ggggttattt atgcaggggc
      781 tcaaaagaat gttggcccat ctggtgttac aattgtgatt attagaaaag atttgattgg
      841 taatgcacaa gagattacac ctgtgatgtt ggattataag atacatgctg ataatgattc
      901 tttatataat acaccaccat gttatgggat ttatatgtgt gggttagttt ttgaggattt
      961 gttagcacaa ggtgggttag ttgaggttga gaagaagaat gtgaaaaaag cacagatttt
     1021 gtatgatgca attgatggta gtggagggtt ttataggtgt cccgttgaga aatcggttag
     1081 atcgttgatg aacgtgccgt ttacgctcga gaaatcggag ttggaagcgg agtttgtgaa
     1141 ggaagctgcg gctgaaaaga tggttcaatt gaaggggcat agatcggttg gtggaatgcg
     1201 cgcttcgatt tataatgcta tgccattggc tggtgttgag aagttggttg agttcatgaa
     1261 gaagtttcaa gctaaacatg gttagaagat ttggtgtgtt ttaatgttgc ttgctctgtt
     1321 tttgatcttt ctgttatgtt accttgtttt tgtatcttta gggatgcatt gttgattgga
     1381 tttgggcaag aatgtttagg ttgtttgcat taggattagt tcgagtaaaa gggaatgatc
     1441 tatctgtatc attatcgatt caagactata aaaagtttgg atctttacca tcaataatcg
     1501 aatctggatt tagtaatta
//
LOCUS       XM_071830258            1608 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nicotinamide adenine
            dinucleotide transporter 2, mitochondrial-like (LOC139840036),
            transcript variant X1, mRNA.
ACCESSION   XM_071830258
VERSION     XM_071830258.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1608
                     /gene="LOC139840036"
                     /note="nicotinamide adenine dinucleotide transporter 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 Proteins"
                     /db_xref="GeneID:139840036"
     CDS             337..1287
                     /gene="LOC139840036"
                     /codon_start=1
                     /product="nicotinamide adenine dinucleotide transporter 2,
                     mitochondrial-like isoform X1"
                     /protein_id="XP_071686359.1"
                     /db_xref="GeneID:139840036"
                     /translation="MTVGEPRNGMDIAYDAVSGASAGAIAATIMSPLDVIKTRLQVYG
                     LPDVTKNKGSVIITSLKTILAKEGPRGLYRGLAPTVAALLPNWAVYFAVYGQLKELLD
                     SHVDSSGHLTFGANMVAASGAGVATAITTNPLWVVKTRLQTQGMREGVIPYTSISSAL
                     RRIVHEEGFKGLYSGLLPSLAGISHVAIQFPAYERIKYFLAERDHIDTKDLSPGKLAI
                     ASSMSKVLASLSTYPHEVIRSRLQEQGHNRNPETHYNGVVDCVKKVFRKEGLAGFYRG
                     CGTNLLRTTPSAVITFTSYEMINRFLQHILPPHPSTSDIK"
     misc_feature    <424..639
                     /gene="LOC139840036"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    661..936
                     /gene="LOC139840036"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    961..1254
                     /gene="LOC139840036"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     polyA_site      1608
                     /gene="LOC139840036"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaactcgcat tttgatgtat tgtccaaaat ataaaagatc ccaactttcc aatttcaggt
       61 caaaatcgaa actgaaatca gctaaccctt aaacacggcc tacaagatta tgaaattttc
      121 atttttcttt attcaatttg gacagtcaaa tacgttcccc acttaatttt tgttttttcc
      181 acacgggcaa acttcaataa agattgaacc tttctcaaaa ctagggttta gtatcatctg
      241 ggtgtttgtt tatctgaaaa acccaattga atccaagtga cttttttagg ttttagaaag
      301 aaacttttat tctgatttat tgattttcgt tgaagtatga cggttgggga gccacggaac
      361 ggtatggata tcgcatacga tgccgtttct ggtgcttctg caggtgcgat tgctgccact
      421 attatgagcc cgttagacgt catcaagacg cgattgcaag tttatggact gcctgacgtg
      481 actaagaata aaggtagtgt tattattaca agcctaaaaa ccatattagc caaggaggga
      541 ccaaggggat tatatcgggg ccttgcgcca acagtggctg cactacttcc aaactgggct
      601 gtctatttcg ccgtttatgg acaactcaaa gagcttcttg attcacatgt tgacagtagt
      661 gggcatctta cgttcggtgc gaatatggta gccgcttctg gtgctggagt tgctaccgcg
      721 atcaccacaa atcctttgtg ggttgtcaaa acaaggctcc aaacacaagg gatgagagag
      781 ggtgtgatac cgtatacaag catatcttca gccttgaggc gaattgttca tgaggaaggc
      841 tttaaagggt tgtacagtgg actcttaccc tctcttgctg gaatcagtca tgttgctata
      901 cagtttccag cctatgagag gatcaaatat ttcttggctg aaagggatca catagatact
      961 aaggatctaa gtcccgggaa acttgcaatc gcctcttcaa tgtccaaagt actcgcttcg
     1021 ttgtcgactt acccgcacga ggtgattcgc tcgagacttc aagaacaagg gcacaataga
     1081 aaccctgaaa cacattataa tggtgttgtt gattgcgtaa aaaaggtatt ccgaaaagaa
     1141 ggtttggctg gtttttatcg agggtgcggg actaatcttt tgagaacaac tccgtcagcg
     1201 gttattacgt ttacgagtta cgagatgatt aatagattct tgcagcatat tttacctcct
     1261 cacccttcaa caagtgacat caaatgatgt taacaataat agtgatttac cgacgtctaa
     1321 aatggcatct aatcatagta caagaactat ttgagactgg tgaattgaat tttcaatgga
     1381 agcaatttga tgatgatgac aatgatgatg atgatgatga tgaataatta taggtgacag
     1441 catttacttg tcttgttatt tttcggttta taataaaatt acattgagta taatatgtct
     1501 agagtttagt tcaggttagg gcttattttt cggagaaatg gctgatcaac gaatgttaaa
     1561 caaacattat atcatgctgt agaagctaat ataaatgttt tttcttaa
//
LOCUS       XM_071830259            1308 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nicotinamide adenine
            dinucleotide transporter 2, mitochondrial-like (LOC139840036),
            transcript variant X2, mRNA.
ACCESSION   XM_071830259
VERSION     XM_071830259.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1308
                     /gene="LOC139840036"
                     /note="nicotinamide adenine dinucleotide transporter 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840036"
     CDS             124..987
                     /gene="LOC139840036"
                     /codon_start=1
                     /product="nicotinamide adenine dinucleotide transporter 2,
                     mitochondrial-like isoform X2"
                     /protein_id="XP_071686360.1"
                     /db_xref="GeneID:139840036"
                     /translation="MSPLDVIKTRLQVYGLPDVTKNKGSVIITSLKTILAKEGPRGLY
                     RGLAPTVAALLPNWAVYFAVYGQLKELLDSHVDSSGHLTFGANMVAASGAGVATAITT
                     NPLWVVKTRLQTQGMREGVIPYTSISSALRRIVHEEGFKGLYSGLLPSLAGISHVAIQ
                     FPAYERIKYFLAERDHIDTKDLSPGKLAIASSMSKVLASLSTYPHEVIRSRLQEQGHN
                     RNPETHYNGVVDCVKKVFRKEGLAGFYRGCGTNLLRTTPSAVITFTSYEMINRFLQHI
                     LPPHPSTSDIK"
     misc_feature    <124..339
                     /gene="LOC139840036"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    361..636
                     /gene="LOC139840036"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    661..954
                     /gene="LOC139840036"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     polyA_site      1308
                     /gene="LOC139840036"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttgaagtat gacggttggg gagccacgga acggtatgga tatcgcatac gatgccgttt
       61 ctggtgcttc tgcaggtata aaggttggtg cttttttgta taggtgcgat tgctgccact
      121 attatgagcc cgttagacgt catcaagacg cgattgcaag tttatggact gcctgacgtg
      181 actaagaata aaggtagtgt tattattaca agcctaaaaa ccatattagc caaggaggga
      241 ccaaggggat tatatcgggg ccttgcgcca acagtggctg cactacttcc aaactgggct
      301 gtctatttcg ccgtttatgg acaactcaaa gagcttcttg attcacatgt tgacagtagt
      361 gggcatctta cgttcggtgc gaatatggta gccgcttctg gtgctggagt tgctaccgcg
      421 atcaccacaa atcctttgtg ggttgtcaaa acaaggctcc aaacacaagg gatgagagag
      481 ggtgtgatac cgtatacaag catatcttca gccttgaggc gaattgttca tgaggaaggc
      541 tttaaagggt tgtacagtgg actcttaccc tctcttgctg gaatcagtca tgttgctata
      601 cagtttccag cctatgagag gatcaaatat ttcttggctg aaagggatca catagatact
      661 aaggatctaa gtcccgggaa acttgcaatc gcctcttcaa tgtccaaagt actcgcttcg
      721 ttgtcgactt acccgcacga ggtgattcgc tcgagacttc aagaacaagg gcacaataga
      781 aaccctgaaa cacattataa tggtgttgtt gattgcgtaa aaaaggtatt ccgaaaagaa
      841 ggtttggctg gtttttatcg agggtgcggg actaatcttt tgagaacaac tccgtcagcg
      901 gttattacgt ttacgagtta cgagatgatt aatagattct tgcagcatat tttacctcct
      961 cacccttcaa caagtgacat caaatgatgt taacaataat agtgatttac cgacgtctaa
     1021 aatggcatct aatcatagta caagaactat ttgagactgg tgaattgaat tttcaatgga
     1081 agcaatttga tgatgatgac aatgatgatg atgatgatga tgaataatta taggtgacag
     1141 catttacttg tcttgttatt tttcggttta taataaaatt acattgagta taatatgtct
     1201 agagtttagt tcaggttagg gcttattttt cggagaaatg gctgatcaac gaatgttaaa
     1261 caaacattat atcatgctgt agaagctaat ataaatgttt tttcttaa
//
LOCUS       XM_071830260             722 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PLANT CADMIUM
            RESISTANCE 3-like (LOC139840037), mRNA.
ACCESSION   XM_071830260
VERSION     XM_071830260.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..722
                     /gene="LOC139840037"
                     /note="protein PLANT CADMIUM RESISTANCE 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840037"
     CDS             1..576
                     /gene="LOC139840037"
                     /codon_start=1
                     /product="protein PLANT CADMIUM RESISTANCE 3-like"
                     /protein_id="XP_071686361.1"
                     /db_xref="GeneID:139840037"
                     /translation="MYPSVSQDYPQAPSPPQQQQPSAPPLSYHQPPPPPPQHYVTGIP
                     AHYVPPHHRVNANWSTSLCACCSDVSNCCVTCWCPCITFGQIAEIVDKGNTPCALHGG
                     LYAVIQAFTCVGCLYSCLYRTKMRSQYGLREVPCNDCLVHFCCEPCALCQEYRELKHR
                     GFDLSIGWQGNMEAQTYGVQMPPFTPVGMYR"
     misc_feature    172..468
                     /gene="LOC139840037"
                     /note="PLAC8 family; Region: PLAC8; pfam04749"
                     /db_xref="CDD:461417"
ORIGIN      
        1 atgtatcctt ctgtatcaca agattacccg caagcaccat caccaccaca acaacaacaa
       61 ccatctgctc caccactatc gtaccaccaa ccgccaccgc caccacccca acactatgtt
      121 accggtattc cggcgcatta cgtgccacct catcatcggg tcaatgctaa ttggtctacc
      181 agcctttgtg cgtgttgctc tgatgtctcc aactgttgcg taacatgttg gtgcccttgt
      241 atcacttttg gacaaattgc tgagatcgtt gataaaggga atactccttg tgcgttacat
      301 gggggtttat atgctgtaat ccaggctttc acatgcgttg gatgcttgta ttcatgtttg
      361 tatcggacaa agatgagaag ccaatacgga ctgcgtgaag ttccttgtaa cgattgcctt
      421 gttcattttt gttgtgaacc gtgtgccttg tgtcaagagt atcgcgagct caaacatcgt
      481 ggatttgatt tatcaatagg atggcaaggt aatatggaag cgcaaactta tggtgtacaa
      541 atgccaccat ttactcctgt aggaatgtac cgttagatcg aacaacgccc atgtcacttt
      601 agctgttatg atttgttttt gtgttggttc aacatgaata tattgttcag tagttaggag
      661 agattatata ctagaattat gacccagtta tcataatcta atatctaata taaatataat
      721 at
//
LOCUS       XM_071830261            4012 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            BRUTUS-like (LOC139840038), mRNA.
ACCESSION   XM_071830261
VERSION     XM_071830261.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4012
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4012
                     /gene="LOC139840038"
                     /note="zinc finger protein BRUTUS-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139840038"
     CDS             164..3700
                     /gene="LOC139840038"
                     /codon_start=1
                     /product="zinc finger protein BRUTUS-like"
                     /protein_id="XP_071686362.1"
                     /db_xref="GeneID:139840038"
                     /translation="MATPLTGLQHRDVGGGVAVMATVNQIDPGSNNNKTSKKQSSPIH
                     IFLFFHKAIRSELDALHRSAIDFATKSHVEIEPLLNRYHFLRSIYKHHCNAEDEVIFP
                     ALDIRVKNVARTYSLEHEGESVIFDQLFALLDSDMQNEESLRRELASCTGALQTSISQ
                     HMSKEEEQVLPLLVEKFSFEEQASLVWQFLCSIPVNMMAEFLPWLSASVSSDEQQEMR
                     SSLRKVIPEEKLLQQIIFTWMDGVSVFKKRKSSEEDATYQCACSSFRDENRESLDSPL
                     DRPVDEILHWHKAIKKELIDIAESARRIQLSGDFSDLSAFNKRLQFIAEVCIFHSIAE
                     DKVIFPAVDAELSFAQEHAEEESEFDKFRCLIESIEKDGANSSSSEFCSKLCMHADHI
                     MSILDKHFKNEELQVLPLARKHFSPKRQRELLYQSLCVMPLRLIECVLPWLVGSLTEE
                     EAKSFLHNMHMAAPASDTALVTLFSGWACKGRPRETCLSSGTKGCPAKAFLENNDGST
                     PPCCPCNQPNKRPNSSSRKESNGFGTQGTPSIQVKQSCCVPGLGMKSNNLGTGSVKSL
                     RSLSFGPSSPSSSSGFFNWETGISLIDEGTGRPIDTIFKFHKAIRKDLEFLDVESGKL
                     NESNESFLHQFNGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEE
                     KLFEDISTSLFELCELHETNSISSDSNDNSRNYNDLATKVQGMCKSIRVTLDQHILRE
                     ELELWPLFDRHFSVEEQDKLVGRIIGTTGAEVLQSMLPWVTSVLTQEEHNRMMDTWKQ
                     ATKNTMFTEWLNEWWEGSSPSSDASASASESENNVSQVGDVHEGLDPNDYTFKPGWKD
                     IFRMNQNELESEIRKVSRDPTLDPRRKAYLIQNLMTSRWIAAQQKLPQGRKGETSDGE
                     GLHGCSPSFRDAEKQVFGCEHYKRNCKLRAACCQELFTCRFCHDNVSDHTMDRKATTE
                     MMCMKCLKIQPVGPTCSTPSCNGFSMAKYYCSYCKFFDDERTVYHCPFCNLCRLGKGL
                     GIDFFHCMTCNYCLGIKLVDHKCREKGLETNCPICCDFLFTSSASVRALPCGHFMHSA
                     CFQAYACTHYICPICSKSMGDMSVYFGMLDALMSSEVLPEEYRNRCQDILCNDCDKKG
                     SAPFHWLYHKCGSCGSYNTRVIKVDTIADCSN"
     misc_feature    293..676
                     /gene="LOC139840038"
                     /note="Hemerythrin-like domain; Region: Hr-like; cd12108"
                     /db_xref="CDD:213983"
     misc_feature    1004..1390
                     /gene="LOC139840038"
                     /note="Hemerythrin-like domain; Region: Hr-like; cd12108"
                     /db_xref="CDD:213983"
     misc_feature    1964..2401
                     /gene="LOC139840038"
                     /note="Hemerythrin-like domain; Region: Hr-like; cd12108"
                     /db_xref="CDD:213983"
     misc_feature    2960..3190
                     /gene="LOC139840038"
                     /note="CHY zinc finger; Region: zf-CHY; pfam05495"
                     /db_xref="CDD:461665"
     misc_feature    3344..3475
                     /gene="LOC139840038"
                     /note="RING finger, H2 subclass, found in p53-induced
                     RING-H2 protein (Pirh2) and similar proteins; Region:
                     RING-H2_Pirh2-like; cd16464"
                     /db_xref="CDD:438127"
     misc_feature    3485..3661
                     /gene="LOC139840038"
                     /note="Zinc-ribbon; Region: zinc_ribbon_6; pfam14599"
                     /db_xref="CDD:464215"
ORIGIN      
        1 ttaccatctc cgttcccttc gtattctaga gagagaaaat aaaaaataaa aatgaaatta
       61 tattatcgtt gatagaactt gtaaatatct agggtttgtg aaatctgaat cggattacat
      121 aaattgattt ggatttgata cgtcagctta tcgctggtac aaaatggcga cgccattgac
      181 tggattgcaa caccgggatg taggtggcgg tgttgcggtg atggcgacgg tgaaccagat
      241 cgatcctggg agtaataata ataaaacttc gaagaaacag agttctccta ttcatatatt
      301 tttgtttttt cacaaagcaa tacgttcaga gctcgatgct ttacatcgtt ctgctattga
      361 ttttgctact aaatcacatg tggaaattga gcctttgctt aaccgctatc actttcttag
      421 gtcaatttat aagcatcact gcaatgccga agatgaggtt attttccctg ctcttgatat
      481 acgtgtcaag aacgttgctc ggacttattc tcttgagcat gagggcgaaa gtgtaatttt
      541 tgatcaactc tttgcgttgc tggattcaga catgcaaaat gaagaaagcc ttagaagaga
      601 attagcttcc tgcacaggag cccttcaaac atcaattagc cagcacatgt ccaaagagga
      661 ggagcaggtg ttacccttgc ttgttgagaa attttcattt gaagaacaag cttcgttagt
      721 ttggcagttt ttgtgtagta ttcccgttaa catgatggca gagtttcttc catggctttc
      781 agcttccgta tcttctgatg aacaacagga gatgcgtagt tctttgcgca aagtaattcc
      841 agaagaaaag cttcttcaac agattatatt cacatggatg gatggtgtca gtgttttcaa
      901 gaaacgcaaa agttcagaag aggatgccac atatcagtgc gcatgttcat cttttagaga
      961 tgaaaaccga gaatcattag attcaccgct tgatcgtcct gtagatgaaa tattacactg
     1021 gcacaaggct ataaagaagg aactaatcga tatagctgag tcagctagaa ggatacagtt
     1081 atctggagat ttttccgatt tatctgcttt taataagagg ctgcaattta ttgcagaagt
     1141 ttgcatattc catagtattg ctgaagataa agttatattc cctgccgtag atgcggaatt
     1201 gtcttttgct caggaacatg cagaagaaga aagcgaattt gacaaattta gatgtctgat
     1261 tgaaagtatt gaaaaagatg gagcaaactc atcttcatcg gagttttgtt ccaagttatg
     1321 catgcatgct gaccatatca tgtctatcct tgacaaacac ttcaaaaatg aagaacttca
     1381 ggttcttcca cttgcacgta aacattttag tccaaagaga cagcgagagc ttctatacca
     1441 aagcttatgt gtgatgccat tgagattaat tgaatgtgtg ttaccatggt tggtggggtc
     1501 acttactgaa gaggaagcca agtcatttct tcataacatg catatggcag cccctgcgtc
     1561 ggatactgca cttgttaccc ttttttctgg ttgggcttgc aaaggccggc cacgggaaac
     1621 atgtttgtct tctggtacca agggttgtcc tgccaaagcg tttttagaaa acaatgatgg
     1681 ttccacccct ccttgctgtc cctgcaacca gccaaacaag cgacccaatt caagttcacg
     1741 aaaagaaagc aacggttttg gtactcaggg gaccccaagt attcaagtaa aacaatcttg
     1801 ttgtgttcct gggcttggaa tgaaaagtaa caatttagga acgggttctg tgaaatcgtt
     1861 aagatcttta tcttttggcc catcttctcc ttcctcaagt tctggatttt ttaactggga
     1921 aacgggcata agcttgattg atgaaggcac aggtcggcca attgatacaa ttttcaagtt
     1981 tcataaagca attcgtaaag atttggagtt tcttgacgtt gaatcaggga agttaaatga
     2041 atcaaacgaa agtttccttc accagtttaa tggtagattt cgtttgttat ggggtttata
     2101 tagagctcac agtaatgcag aggatgacat tgtgtttcct gcattagaat caaaagaaac
     2161 tttacacaat gttagtcact catatacttt agaccacaaa caagaagaaa agctttttga
     2221 ggatatatca acatcacttt ttgaactttg tgaacttcat gaaaccaatt ctatatcatc
     2281 tgattctaat gataattcaa gaaactacaa tgatttggct acaaaggttc aggggatgtg
     2341 taaatccatt agggtaacac tggatcaaca tattttacgt gaagaacttg agctgtggcc
     2401 tttgtttgat agacattttt ctgtggagga acaggataaa cttgtgggta gaataattgg
     2461 tacaacgggt gcagaagttt tacaatcaat gttaccatgg gtgacatctg ttcttactca
     2521 ggaggaacat aatagaatga tggacacatg gaaacaagca actaaaaata caatgtttac
     2581 tgagtggctt aatgaatggt gggaaggttc atctccatcc tcagatgcat ctgcttcggc
     2641 atcagaatct gaaaataatg tctcacaagt tggtgatgta catgaagggt tggatccaaa
     2701 tgattataca ttcaagcctg ggtggaaaga tatatttagg atgaaccaaa atgagcttga
     2761 gtcggagata agaaaagttt ctagggatcc aactcttgat cccagaagga aggcctatct
     2821 cattcaaaac ctaatgacca gtcgatggat tgctgcccag caaaagttac cgcaaggaag
     2881 aaaaggcgaa acatcagatg gtgaaggtct acatggatgc tctccttcat ttcgtgatgc
     2941 agagaaacaa gtgtttggtt gtgagcatta taagcgcaac tgtaagcttc gagctgcttg
     3001 ttgtcaggag ctatttacat gtaggttttg ccatgataat gtcagtgacc atacaatgga
     3061 taggaaagct acaactgaaa tgatgtgtat gaagtgcctg aaaattcaac ccgttggacc
     3121 aacttgctca acaccatctt gcaatggatt ttcaatggca aaatattatt gtagctattg
     3181 caaatttttt gatgatgaaa ggacggtgta tcattgccct ttttgcaatt tatgccggct
     3241 tgggaagggg ctcgggatcg actttttcca ttgtatgact tgcaactact gtttggggat
     3301 aaaattggtg gatcataagt gcagagagaa aggcctggaa acaaactgcc ctatatgctg
     3361 tgattttctg ttcacatcga gtgcgtctgt gagagcccta ccatgtggtc attttatgca
     3421 ttctgcttgc ttccaggcgt atgcatgcac acactacatt tgtccaatat gcagcaaatc
     3481 tatgggagat atgtcggtgt atttcgggat gcttgatgct ttgatgtctt ctgaggtgct
     3541 cccagaagag tataggaacc gctgtcagga tattctatgc aacgactgtg ataagaaggg
     3601 aagtgctcct tttcactggc tttaccacaa gtgcggttcc tgtggatcgt acaacaccag
     3661 agtaatcaag gttgacacga ttgctgattg ttcaaattag aagcttgcat tttgtaaaac
     3721 gtgtaaatac actttgatcc aatacattag acgtgactcg tgggaggatg tacattgcaa
     3781 tatcttttgt tgccatgcat tgcgttgctt tgcttttttt ttttcttctt ctcgtttctt
     3841 atataaaact cagcacttcg gatttgtagt atgttcaaat ttttcaaagg agggacgata
     3901 tgtgttattt ctagtagtta gaattgatcg gtgtcatttt gtgtaaactt tgaaaggtac
     3961 ccctatatac ttaaatttga tacgttatgt tagctacatg tccaattaat ta
//
LOCUS       XR_011757196             186 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840039), ncRNA.
ACCESSION   XR_011757196
VERSION     XR_011757196.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..186
                     /gene="LOC139840039"
                     /note="uncharacterized LOC139840039; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840039"
     ncRNA           1..186
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840039"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840039"
ORIGIN      
        1 gtttaaatag actgtttgca gctacttgtt tctccaaata aagagtggag atcacttggg
       61 tgaggcccgt tggtcaaaga aaccaaggag aaagcttgaa tactctctgc ccgttggcgc
      121 tgtcggtgtt tcagcctttt ataaagaaat cagagtatga tgtagtgcct gtcaaaccat
      181 ggggag
//
LOCUS       XM_071830263            1584 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycosyltransferase
            BC10-like (LOC139840040), mRNA.
ACCESSION   XM_071830263
VERSION     XM_071830263.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1584
                     /gene="LOC139840040"
                     /note="glycosyltransferase BC10-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139840040"
     CDS             277..1428
                     /gene="LOC139840040"
                     /codon_start=1
                     /product="glycosyltransferase BC10-like"
                     /protein_id="XP_071686364.1"
                     /db_xref="GeneID:139840040"
                     /translation="MQSRLVTMEEGKDPTTNSIRTNQSRVFPFKLLRFMLCLLGVGII
                     LSIISIRMNRNLGIRNIVSGTQPCFQEPITLQNLIKPPSSYIHSMNDSELFWRASFVP
                     QIKEYPFKRIPKIAFMFLTRGPLPMSPLWEKFFDGNEGLYSIYVHSLPHYTPSFPTSS
                     VFFGKQIPCQVVEWGRMSMCDAERRLLANALLDISNEWFVLLSEACIPLHNFSIVYRY
                     ISRSRFSFMGAVDEPGPYGRGRYNPNMLPEVNISQWRKGSQWFETNRKLAVDIIKDTK
                     FYPKFEQFCRPHACYVDEHYFPTMLTIQSPYLLANRSLTYVDWSRGGAHPATFGMNDI
                     NKNFFKKIVEDQTCIYNNQPTSVCFLFARKFAPSALDTLLKHSTEFFGY"
     misc_feature    619..1305
                     /gene="LOC139840040"
                     /note="Core-2/I-Branching enzyme; Region: Branch;
                     pfam02485"
                     /db_xref="CDD:426795"
     polyA_site      1584
                     /gene="LOC139840040"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaaaacact cccaaactcc tgtttctttc aatcacacaa ttatatccta ccagaatcag
       61 cttcgatctt tgtagttaat aacgattaga tttctacctt tcccgatttt ctttcaaaga
      121 tctaacgtgg ggtttcgttt tcatgatatg ggcatatatt tctttcctaa aagatccaat
      181 ctttgagcat gaaaacgtta cataatcgca atatgcagat caggtgtttg tgaaattgtc
      241 tctgagaaca aatatttcgt tttctgccct aattttatgc agtcaaggtt agtgacaatg
      301 gaagaaggca aagaccctac aacaaactca attaggacta atcaatcaag ggtttttcca
      361 tttaaattac ttagatttat gttgtgtctt ttgggtgtag gcattattct ttcaattatt
      421 agtatacgaa tgaaccgaaa cttgggaata aggaatattg tttcaggaac acaaccttgt
      481 tttcaagaac ctataacttt acaaaatttg ataaaacctc catctagtta tatacatagt
      541 atgaatgata gtgaattgtt ctggagagca tcatttgttc ctcagattaa agagtacccg
      601 tttaaacgaa taccaaagat tgcatttatg tttttaacaa gggggccatt gcccatgtca
      661 ccattgtggg agaagttttt tgatggtaat gaaggacttt attcgattta tgttcattct
      721 ttgcctcatt atactcctag ttttccgaca tcttcggtct tctttgggaa gcagatacct
      781 tgtcaggtgg tggaatgggg aagaatgagt atgtgtgatg ccgagagaag acttttagcc
      841 aacgcgttac tcgacatttc aaacgagtgg tttgtactct tatctgaagc atgcataccc
      901 cttcacaatt tcagtattgt ttatcgttac atatcaagat ccagattcag cttcatgggt
      961 gcagttgatg agcccggccc gtacggcaga ggtcgatata atcctaatat gttaccagaa
     1021 gtcaacatca gtcaatggcg aaaagggtct caatggtttg aaaccaatag gaagcttgca
     1081 gttgatatca taaaagatac aaaattttac ccaaaattcg aacaattctg tagaccccac
     1141 gcgtgttatg ttgacgagca ttattttcct acaatgctta caattcaatc tccatatcta
     1201 ctagcaaaca ggagtcttac ttatgtagat tggtcaaggg gtggtgctca tccggctaca
     1261 tttgggatga atgatattaa caagaacttt ttcaagaaaa tagtcgaaga tcaaacgtgc
     1321 atttataata atcagccaac ttctgtttgc tttctttttg caagaaagtt tgctcctagt
     1381 gctctcgata cgttgttaaa gcattcgact gaattctttg gctactaatt ggcaggtttt
     1441 gtcatactta caaatagata ccagtcactg ttggacagtt ttttgttgaa taacaaccca
     1501 ttcaggtagt tgacagtttt ataatacata tttggagttt ttgtattagt atgaatcctt
     1561 tgtttatgaa actttgatgc cttc
//
LOCUS       XM_071830264            1161 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent Clp protease
            proteolytic subunit-related protein 4, chloroplastic-like
            (LOC139840041), mRNA.
ACCESSION   XM_071830264
VERSION     XM_071830264.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1161
                     /gene="LOC139840041"
                     /note="ATP-dependent Clp protease proteolytic
                     subunit-related protein 4, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840041"
     CDS             13..924
                     /gene="LOC139840041"
                     /codon_start=1
                     /product="ATP-dependent Clp protease proteolytic
                     subunit-related protein 4, chloroplastic-like"
                     /protein_id="XP_071686365.1"
                     /db_xref="GeneID:139840041"
                     /translation="MEVATMASHFFPTSSRILSSPITNSKYNNRTLTTSSSSSSIKRS
                     LSTNFISPYVGTGVTSDLSGHKIRPASLNPYSNSHGKRLGVTMVIPFSRGSAWEQPPP
                     DLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDKKPIYLYINSTGTTKGGEKL
                     GYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGSKGNRSALPSSTIMMKQPI
                     ARFQGQASDVEIMRKEIKNVKTELVKLYAKEIGKTTEQIEEDIRRPKYFSPSEAVEYG
                     IIDKVIYNERGSEDRGVISDLRRAQLL"
     misc_feature    319..855
                     /gene="LOC139840041"
                     /note="Caseinolytic protease (ClpP) is an ATP-dependent,
                     highly conserved serine protease; Region: S14_ClpP_2;
                     cd07017"
                     /db_xref="CDD:132928"
     misc_feature    order(355..357,361..363,388..393,400..405,412..414,
                     457..459,502..504,514..516,523..525,532..537,547..549,
                     571..573,637..639,643..645,661..672,712..714,721..723,
                     727..729,733..735,802..804,808..810)
                     /gene="LOC139840041"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:132928"
     misc_feature    order(580..582,655..657,802..804)
                     /gene="LOC139840041"
                     /note="active site residues [active]"
                     /db_xref="CDD:132928"
     polyA_site      1161
                     /gene="LOC139840041"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agcagcagca aaatggaagt ggcgacaatg gcttctcact ttttcccaac ttcttcacgc
       61 atactttcat caccaataac caattcaaaa tacaacaacc gaaccttaac cacgtcatca
      121 tcctcatcat caattaaacg ttccttatcc accaatttta tctctccgta cgtcggaacc
      181 ggtgttacaa gcgatttatc cggtcataag atccgaccag catcactcaa tccgtattcc
      241 aactctcatg gaaaacgtct cggtgttact atggtgattc ctttttcaag gggaagtgca
      301 tgggagcaac cacctccaga tttggcatcg tatttgtaca agaatcgaat tgtatatttg
      361 ggtatgtccc tggtcccttc ggtgaccgaa ctaatactgg ccgaatttct ttacctacaa
      421 tatgaggatg acaaaaagcc gatatacctt tacataaact ctactggaac caccaagggt
      481 ggtgaaaagc tgggctacga aacagaggct tttgcaattt atgacgttat gagatatgtg
      541 aagccaccga tttttacgct atgtgttggc aatgcatggg gagaggctgc tttgctattg
      601 gctgctgggt cgaaaggaaa tcggtctgca ctgccctcgt caacgatcat gatgaagcag
      661 ccaattgcaa gatttcaagg tcaagcatca gatgttgaga ttatgagaaa agaaataaag
      721 aatgtgaaga ctgaactggt gaaactctat gctaaagaaa taggcaaaac aaccgagcaa
      781 attgaagaag atataaggcg tccaaagtac ttcagtccta gtgaggctgt tgaatacgga
      841 atcatcgata aggttattta caatgagagg gggagcgaag atagaggagt catttctgac
      901 ttgaggagag cacaactact ttgaatgacg tcgaatggta gtcaaattgt caaaacaatt
      961 cttgcttttt cactgtcgat ttgccgtagt atttgtgata tatgacggca gtggttgtgg
     1021 ttgtattcaa cagaccacaa aaaatgttgc tgatagatat gtgcattttg ttaaatgcag
     1081 catagtatta ttgtaaaagg gaatgcattt ttaaagtatg cttttgttaa tttaacgaca
     1141 cgattatgaa ttgccacttg a
//
LOCUS       XM_071830265            1766 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome non-ATPase
            regulatory subunit 4 homolog (LOC139840042), mRNA.
ACCESSION   XM_071830265
VERSION     XM_071830265.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1766
                     /gene="LOC139840042"
                     /note="26S proteasome non-ATPase regulatory subunit 4
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139840042"
     CDS             221..1438
                     /gene="LOC139840042"
                     /codon_start=1
                     /product="26S proteasome non-ATPase regulatory subunit 4
                     homolog"
                     /protein_id="XP_071686366.1"
                     /db_xref="GeneID:139840042"
                     /translation="MVLEATMICIDNSEWMRNGDYSPTRFQAQADAVNLICGAKTQSN
                     PENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLDIGGEMNLAAGIQVAQLALKHRQ
                     NKKQQQRIIVFAGGPVKYDKKVLEMIGKKLKKNSVALDVVNFGEEDEAKTEKLEALVA
                     AVNNNDSSHIVHVPAGSNALSDVLLSTPIFTGDGEGSGSGFAAAAAAASAGGVSGFDF
                     GVDPNLDPELALALRVSMEEERARQEAAAKKAADDSSKQEGESSSQDATMSENVATSA
                     SESENKKDDLMDDENALLQQALAMSMDDPEATTVTTTTRDVDMSEAAADDQDLALALQ
                     LSVQEGAKEESGQADMGKLLADQSFVSSILGSLPGVDPNDPSVKDLLASMQNQLESEQ
                     KKDEDKAPKEDDK"
     misc_feature    221..784
                     /gene="LOC139840042"
                     /note="26S proteasome plays a major role in eukaryotic
                     protein breakdown, especially for ubiquitin-tagged
                     proteins. It is an ATP-dependent protease responsible for
                     the bulk of non-lysosomal proteolysis in eukaryotes, often
                     using covalent modification of...; Region:
                     VWA_26S_proteasome_subunit; cd01452"
                     /db_xref="CDD:238729"
     misc_feature    order(251..253,257..259,410..412)
                     /gene="LOC139840042"
                     /note="partial signature motif [active]"
                     /db_xref="CDD:238729"
     misc_feature    1253..1393
                     /gene="LOC139840042"
                     /note="RAZUL (Rpn10 AZUL-binding) domain of 26S proteasome
                     non-ATPase regulatory subunit 4 (PSMD4) and similar
                     proteins; Region: PSMD4_RAZUL; cd22297"
                     /db_xref="CDD:412092"
     misc_feature    order(1262..1267,1271..1273,1277..1282,1286..1288,
                     1295..1300,1307..1312,1316..1330,1340..1342,1346..1351,
                     1358..1363,1370..1372,1379..1381)
                     /gene="LOC139840042"
                     /note="AZUL binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412092"
ORIGIN      
        1 gatcaccaaa cacccaacca aaatcaggga ctttatatgc gggtttcagg gatctaatag
       61 cttcgtcatc actctttcat attcatactc cgatactcgt attcatatat cagtaacaag
      121 taactatcgt attgatcaag aaatctcccg attccctttc tcagtctcta atcgttataa
      181 cgatttactc aaattcttct tcaattttaa attatcaatc atggtgctcg aggctacgat
      241 gatctgtatt gacaattctg aatggatgcg taacggagat tactctccga ctaggtttca
      301 ggctcaagcc gacgccgtta atctgatatg tggtgctaaa acccagtcaa atcccgagaa
      361 tactgtgggt gtcttgacaa tggctggcaa aggcgttcgt gttcttgtaa ctccaactag
      421 tgatcttgga aagattttgg cttgcatgca tggtttagat ataggtggtg agatgaactt
      481 ggcagccggg atccaggttg cccagttggc tttgaagcat cgtcaaaaca aaaagcagca
      541 acaaaggatt attgtgtttg ctggaggtcc ggttaaatat gacaagaaag ttttggagat
      601 gattggaaag aagttaaaaa agaacagtgt agctcttgat gttgtgaact ttggggaaga
      661 agatgaagca aaaacagaga agcttgaggc ccttgttgct gctgtaaata ataacgatag
      721 cagtcacatt gttcatgttc cagctgggtc gaatgctctt tctgacgtcc tgttgagtac
      781 tcctatcttt actggtgatg gagaaggtag tggaagcggc tttgcagcgg ctgctgccgc
      841 agcttccgct ggtggtgtat ctggctttga ctttggtgtt gacccaaatc tggatcctga
      901 acttgcactt gcacttcgtg tgtcaatgga agaggagaga gcgaggcaag aagctgctgc
      961 gaaaaaggct gcagatgatt cttcaaagca agaaggggag tctagttcac aagatgcaac
     1021 tatgtctgaa aatgttgcca cgtcagcttc ggaatctgag aataaaaagg atgatttgat
     1081 ggatgatgag aatgcactgc tacaacaggc acttgccatg tcaatggatg atcctgaagc
     1141 tactactgtt acaacaacaa caagggacgt tgatatgtca gaagcagctg ctgatgatca
     1201 agacttggca cttgctctac agttgtctgt tcaagaaggt gcaaaagaag aatccggaca
     1261 ggcggatatg ggcaagctat tggcggatca atcatttgtg tcttcaattc ttggttcact
     1321 cccaggagta gaccctaatg acccatcagt caaagatttg cttgcttcaa tgcaaaatca
     1381 gctcgagtcc gaacagaaga aagatgagga caaagcaccc aaggaggatg acaagtgatc
     1441 ttatatgccc gtcgttatta ataatatgat cactggtcac cggttatgac gcctttcata
     1501 gagatctctt tgacgattga tgttgatgat gtgtatgatg atgggatagt tgcaatgtga
     1561 cgaatgtatg gaatatcata ttattcttgt taccatgcat cagtttctca cttctaatgc
     1621 ttgtttatga actttaatca tggtacttga actttaatcg tggatcagtt tctcacttat
     1681 agatcgatga atggctttct ttagaaaaga agcgaagcta gactgagtca atctagaccg
     1741 attgtcagta caaattaaat cggttt
//
LOCUS       XM_071830266            1861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger CCCH
            domain-containing protein 48-like (LOC139840043), mRNA.
ACCESSION   XM_071830266
VERSION     XM_071830266.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1861
                     /gene="LOC139840043"
                     /note="zinc finger CCCH domain-containing protein 48-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139840043"
     CDS             254..1555
                     /gene="LOC139840043"
                     /codon_start=1
                     /product="zinc finger CCCH domain-containing protein
                     48-like"
                     /protein_id="XP_071686367.1"
                     /db_xref="GeneID:139840043"
                     /translation="MDFDGGKRVFNRLGPAQQQNDNRNQKVCYRWRAGNCNRFPCPFL
                     HRELSAPVNGTTSSKRPYGGGFAMDDQRSTGARRGGGNTWGRGGGRGNGINNEFSKIN
                     NNSVNKKEKICNFWVKGNCSFGDKCRYIHSWSTGCFGMLTHLEGHQKIVSGITLPVGS
                     DKLYTGSKDETVRVWDCQSGQCAGVINVGGEVGCMLSEGPWMFVGLPNLVKAWNVQTN
                     AELSLSGPVGQVYSLVAGSDLLFAGIQDGNILAWKYNTVTNCFEPAASLQGHKSAVVT
                     LVVGANRLYSGSMDNSIRVWNLENLRCLQTLTDHTSVVMSVLCWDQYLLSCSLDKTIK
                     VWAATDSGNLEVTYTHSEEHGLLALCGMHDLESKPVLLCSCNDNSVRAYDLPSFAERG
                     KIFAKEEIRSIHGGPNIFFTGDGTGEVRVWQWLANQSATSA"
     misc_feature    578..649
                     /gene="LOC139840043"
                     /note="zinc finger; Region: ZnF_C3H1; smart00356"
                     /db_xref="CDD:214632"
     misc_feature    671..1522
                     /gene="LOC139840043"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    order(692..694,746..748,758..760,776..781,809..814,
                     872..874,890..895,926..931,974..976,989..991,1007..1012,
                     1061..1063,1106..1108,1121..1123,1139..1144,1178..1183,
                     1229..1231,1241..1243,1259..1261,1265..1267,1304..1309,
                     1370..1372,1382..1384,1400..1405,1439..1441,1487..1489,
                     1499..1501,1517..1522)
                     /gene="LOC139840043"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    824..922
                     /gene="LOC139840043"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    935..1057
                     /gene="LOC139840043"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1079..1177
                     /gene="LOC139840043"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1196..1300
                     /gene="LOC139840043"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1319..1441
                     /gene="LOC139840043"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1451..1519
                     /gene="LOC139840043"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 cattgcccaa tccaccttac gatatcattc ctacatcagc cttagcaacg gccctacata
       61 atctcaaact aacaaattag ggttcttcat ctcatccgtt taaaccctaa tttcccaaat
      121 tcttactaat cgctacgcct ttgattccca aaacctaggg ttatcaatac gaacatcccc
      181 aattacatac tttctcaaca atttatactt gctattcata ttatcgtgta atgatcaccc
      241 gttgacatta acaatggatt tcgatggagg aaaacgagtc tttaatcgat taggtccagc
      301 tcaacaacaa aacgataatc gaaaccagaa ggtatgttat cgttggagag ctggaaactg
      361 taatcgattt ccgtgccctt ttttacaccg ggaattatcg gcgccggtta atggaacgac
      421 gtcgtctaaa cggccttacg gtggcggttt tgcgatggat gatcaacgat caacgggggc
      481 acggcgtggc ggtggtaata cgtggggacg tggtggtggt agaggcaatg gtataaataa
      541 tgaatttagt aaaattaata ataatagtgt caataagaaa gagaagatat gtaatttttg
      601 ggtgaaagga aattgtagtt ttggagataa atgcaggtat atacattcat ggtctactgg
      661 ttgttttggt atgttgactc atcttgaagg tcaccagaag attgtgagtg gtatcacgtt
      721 accggttggg tcagataagt tgtatacagg gagtaaagat gagactgtga gggtttggga
      781 ttgccagtct ggacagtgtg caggggttat taacgttggt ggcgaagtag gctgtatgct
      841 tagtgaaggt ccttggatgt ttgttggctt accaaatcta gtcaaggcat ggaatgtgca
      901 aacgaatgca gagctgagtc ttagtggacc tgttgggcaa gtatattctt tggttgcagg
      961 cagcgattta ctttttgcgg gtatacagga tgggaatata ttggcttgga aatataatac
     1021 ggtcacaaac tgctttgaac cagctgcttc acttcaaggg cacaaatcgg ctgttgtgac
     1081 actagtcgtt ggagccaata gattgtactc tggttcgatg gacaattcta tacgagtctg
     1141 gaaccttgag aatttacggt gtctacagac gttgacagac catacatctg ttgttatgtc
     1201 tgttctttgt tgggatcagt atcttttatc atgctcgctg gataaaacta tcaaggtgtg
     1261 ggcagcaaca gacagtggga acttggaagt aacttacaca catagcgagg aacatggttt
     1321 gctcgcttta tgtgggatgc atgacttaga atccaagcct gtattgttgt gctcttgtaa
     1381 tgacaactct gttcgtgctt atgatttgcc atcgtttgcc gaaaggggga agatatttgc
     1441 aaaagaagag atacgatcta tacacggtgg gcctaatatt ttttttacgg gagatggaac
     1501 cggagaggtt agagtttggc agtggttggc taaccaatct gccacctcag cttgattaaa
     1561 taagataatc ttttaatctg tagacgacga caattatata tacttttttc cctggagatg
     1621 taactggcga cggagttgga ctgtcgtgtt tcagcttcag gaccctctcc atgagtgtgc
     1681 aactagtgcg gttaatatct atcgttataa aatttgtatt attttttgga atgccttcta
     1741 ttagttgtca tagtaataat tgttaacatt tattcttatt ttagccccta atattgcatg
     1801 cctttgtaac ttttttcttc tcagttaaag atcaaattgt tgttcagtaa aaaatctcat
     1861 g
//
LOCUS       XM_071830267            1009 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pumilio homolog 7,
            chloroplastic (LOC139840044), transcript variant X1, mRNA.
ACCESSION   XM_071830267
VERSION     XM_071830267.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1009
                     /gene="LOC139840044"
                     /note="putative pumilio homolog 7, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840044"
     CDS             284..568
                     /gene="LOC139840044"
                     /codon_start=1
                     /product="putative pumilio homolog 7, chloroplastic"
                     /protein_id="XP_071686368.1"
                     /db_xref="GeneID:139840044"
                     /translation="MLENMHTSGFEGLFKVGLLVSSNCQPSFVRELILATHFEQLLQD
                     LHANYVVQTALRVSEGPIHNLLVRVIESHKAISRNSPYSKWIFSRKLLKM"
     misc_feature    <392..550
                     /gene="LOC139840044"
                     /note="Pumilio-family RNA binding domain; Region: Pumilio;
                     cl46378"
                     /db_xref="CDD:480718"
ORIGIN      
        1 caaaagcatt gcacttgatt tgacaactta tattatttgt ttgattatat aattagactg
       61 gtaatgttga aacttgtatt atttgtatga ttatagattc ccaaattcta tgtttctttt
      121 atatttgtct tattagggat gcacactttg accttaattg ttggtgcagt tgaaggatca
      181 tacttgatcg agtctaatat ggtcatgtaa gttatgaagg atcatacaag tgtttgaacc
      241 ttcttcaaat gacagcagct caagttcaca ttagataaac agaatgttag agaacatgca
      301 tacgagtgga tttgaagggc tattcaaggt tggtctcttg gtgtcttcaa attgtcaacc
      361 atcattcgtt cgtgagctga tcttggctac tcactttgaa cagttgcttc aagatctgca
      421 tgctaactat gttgttcaaa ctgctcttcg tgtgtctgag ggtccgattc ataacttgct
      481 ggtgcgtgtg attgaatccc acaaggcaat ctcacgaaat agcccgtatt caaagtggat
      541 tttctcacgc aagttgttaa agatgtgaat gtatgatgat agtgtattaa tgctgtttca
      601 tgtgtcagtt agagttcgaa tcattatagt gataaacggc tcctcgatta caagatcgtg
      661 ttgttaacat tttcgtttta cgagtcatag agtaaaacaa atttgggtca aagttgattc
      721 aaagttctat gaatgctgac gtacatctct gcttcaaagt tcactatgat atacatcaaa
      781 gttcaaagtt catatcttga cagggtaaca aaattagaat aaacgttaaa ggaaaattgc
      841 agcagaactt gagaatgaag taggccagac atgaatctta gtaacggtag atgtataaac
      901 aatggtttgc tgcattcaag gtttattgct tcatagcgtt taggatactt actttgtacc
      961 atacgtttag tttctacatt atatcgttat ttcatatata agtttaaaa
//
LOCUS       XM_071830268             894 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pumilio homolog 7,
            chloroplastic (LOC139840044), transcript variant X2, mRNA.
ACCESSION   XM_071830268
VERSION     XM_071830268.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..894
                     /gene="LOC139840044"
                     /note="putative pumilio homolog 7, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840044"
     CDS             168..452
                     /gene="LOC139840044"
                     /codon_start=1
                     /product="putative pumilio homolog 7, chloroplastic"
                     /protein_id="XP_071686369.1"
                     /db_xref="GeneID:139840044"
                     /translation="MLENMHTSGFEGLFKVGLLVSSNCQPSFVRELILATHFEQLLQD
                     LHANYVVQTALRVSEGPIHNLLVRVIESHKAISRNSPYSKWIFSRKLLKM"
     misc_feature    <276..434
                     /gene="LOC139840044"
                     /note="Pumilio-family RNA binding domain; Region: Pumilio;
                     cl46378"
                     /db_xref="CDD:480718"
ORIGIN      
        1 attaagggcc atttgtatag aatgttggaa taaaattcag atataatatt aagttgaagg
       61 atcatacttg atcgagtcta atatggtcat gtaagttatg aaggatcata caagtgtttg
      121 aaccttcttc aaatgacagc agctcaagtt cacattagat aaacagaatg ttagagaaca
      181 tgcatacgag tggatttgaa gggctattca aggttggtct cttggtgtct tcaaattgtc
      241 aaccatcatt cgttcgtgag ctgatcttgg ctactcactt tgaacagttg cttcaagatc
      301 tgcatgctaa ctatgttgtt caaactgctc ttcgtgtgtc tgagggtccg attcataact
      361 tgctggtgcg tgtgattgaa tcccacaagg caatctcacg aaatagcccg tattcaaagt
      421 ggattttctc acgcaagttg ttaaagatgt gaatgtatga tgatagtgta ttaatgctgt
      481 ttcatgtgtc agttagagtt cgaatcatta tagtgataaa cggctcctcg attacaagat
      541 cgtgttgtta acattttcgt tttacgagtc atagagtaaa acaaatttgg gtcaaagttg
      601 attcaaagtt ctatgaatgc tgacgtacat ctctgcttca aagttcacta tgatatacat
      661 caaagttcaa agttcatatc ttgacagggt aacaaaatta gaataaacgt taaaggaaaa
      721 ttgcagcaga acttgagaat gaagtaggcc agacatgaat cttagtaacg gtagatgtat
      781 aaacaatggt ttgctgcatt caaggtttat tgcttcatag cgtttaggat acttactttg
      841 taccatacgt ttagtttcta cattatatcg ttatttcata tataagttta aaaa
//
LOCUS       XR_011757197            1938 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pumilio homolog 7,
            chloroplastic (LOC139840044), transcript variant X3, misc_RNA.
ACCESSION   XR_011757197
VERSION     XR_011757197.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1938
                     /gene="LOC139840044"
                     /note="putative pumilio homolog 7, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840044"
     misc_RNA        1..1938
                     /gene="LOC139840044"
                     /product="putative pumilio homolog 7, chloroplastic,
                     transcript variant X3"
                     /db_xref="GeneID:139840044"
ORIGIN      
        1 caaaagcatt gcacttgatt tgacaactta tattatttgt ttgattatat aattagactg
       61 gtaatgttga aacttgtatt atttgtatga ttatagattc ccaaattcta tgtttctttt
      121 atatttgtct tattagggat gcacactttg accttaattg ttggtgcagt tgaaggatca
      181 tacttgatcg agtctaatat ggtcatgtaa gttatgaagg atcatacaag tgtttgaacc
      241 ttcttcaaat gacagcagct caagttcaca ttagataaac agaatgttag agaacatgca
      301 tacgagtgga tttgaagggc tattcaaggt tggtctcttg gtgtcttcaa attgtacgtc
      361 tcttttttta tatataacca taactagata gaaagtagac tataaaagat gtcacattga
      421 atgtatttta tagcatcaac aactttacaa tgagctaatt ggttttacta tactgttgat
      481 tgcctattgt ctatatatgg atgtgaaaat tagatgacct ttcaattaag gcattaactt
      541 tgaactgtca gaagcgtatt atgcacactt aattttgtat ggaattggtc caaagcgcta
      601 tgcctatctt ctcaatttct gttgtgaaag aattattttc ttttaatttt tcaacaaaaa
      661 agatagaaag tgttcttaac gtacaagata ggctccattc acaattattc ttgtatgttt
      721 tgttgaacct aaaaagtatg tgctttcata aggatttcca gccctttttc attacaaggt
      781 gtatgcgggt cagtagttac catgatggat tggttggtgg cctctacagt ttttttgctc
      841 aagtaggttc cagttttagt ttcagtcatt tgtgtgtcat atatggaaga tatgcaaatt
      901 actattataa ggtaattgtg ggcattaatt ataggattta tttaaaaatt ctaaataaat
      961 ccttatcatg tttttttcat cctaaacatt agtaaatgta tttttgaaca tttatatgta
     1021 tttggggtca ttaagtagga cataattata attgtggatt actaataatt ttaaatgtgt
     1081 ggttgacttt tgcaacagga tctacttatt attatatcac cacctggtat tatgggtatg
     1141 acctaatgga gttgtaacct ttatgcgaag attttagtag tttttatgat gttaaattgt
     1201 cgcttagaat tacaatacat tatcgacctg caagttccct cggccctgtc aaaattgacc
     1261 tcccattttg agggtcaacc atcattcgtt cgtgagctga tcttggctac tcactttgaa
     1321 cagttgcttc aagatctgca tgctaactat gttgttcaaa ctgctcttcg tgtgtctgag
     1381 ggtccgattc ataacttgct ggtgcgtgtg attgaatccc acaaggcaat ctcacgaaat
     1441 agcccgtatt caaagtggat tttctcacgc aagttgttaa agatgtgaat gtatgatgat
     1501 agtgtattaa tgctgtttca tgtgtcagtt agagttcgaa tcattatagt gataaacggc
     1561 tcctcgatta caagatcgtg ttgttaacat tttcgtttta cgagtcatag agtaaaacaa
     1621 atttgggtca aagttgattc aaagttctat gaatgctgac gtacatctct gcttcaaagt
     1681 tcactatgat atacatcaaa gttcaaagtt catatcttga cagggtaaca aaattagaat
     1741 aaacgttaaa ggaaaattgc agcagaactt gagaatgaag taggccagac atgaatctta
     1801 gtaacggtag atgtataaac aatggtttgc tgcattcaag gtttattgct tcatagcgtt
     1861 taggatactt actttgtacc atacgtttag tttctacatt atatcgttat ttcatatata
     1921 agtttaaaaa ctaataat
//
LOCUS       XR_011757198            1244 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pumilio homolog 7,
            chloroplastic (LOC139840044), transcript variant X4, misc_RNA.
ACCESSION   XR_011757198
VERSION     XR_011757198.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1244
                     /gene="LOC139840044"
                     /note="putative pumilio homolog 7, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840044"
     misc_RNA        1..1244
                     /gene="LOC139840044"
                     /product="putative pumilio homolog 7, chloroplastic,
                     transcript variant X4"
                     /db_xref="GeneID:139840044"
ORIGIN      
        1 caaaagcatt gcacttgatt tgacaactta tattatttgt ttgattatat aattagactg
       61 gtaatgttga aacttgtatt atttgtatga ttatagattc ccaaattcta tgtttctttt
      121 atatttgtct tattagggat gcacactttg accttaattg ttggtgcagt tgaaggatca
      181 tacttgatcg agtctaatat ggtcatgtaa gttatgaagg atcatacaag tgtttgaacc
      241 ttcttcaaat gacagcagct caagttcaca ttagataaac agaatgttag agaacatgca
      301 tacgagtgga tttgaagggc tattcaagga tctacttatt attatatcac cacctggtat
      361 tatgggtatg acctaatgga gttgtaacct ttatgcgaag attttagtag tttttatgat
      421 gttaaattgt cgcttagaat tacaatacat tatcgacctg caagttccct cggccctgtc
      481 aaaattgacc tcccattttg agggtaatta tgtgaatctt gctacctaaa agttcagcag
      541 ccatgttgta gagaaatgtt aagccatatc agattgtcaa tttaggtcaa ccatcattcg
      601 ttcgtgagct gatcttggct actcactttg aacagttgct tcaagatctg catgctaact
      661 atgttgttca aactgctctt cgtgtgtctg agggtccgat tcataacttg ctggtgcgtg
      721 tgattgaatc ccacaaggca atctcacgaa atagcccgta ttcaaagtgg attttctcac
      781 gcaagttgtt aaagatgtga atgtatgatg atagtgtatt aatgctgttt catgtgtcag
      841 ttagagttcg aatcattata gtgataaacg gctcctcgat tacaagatcg tgttgttaac
      901 attttcgttt tacgagtcat agagtaaaac aaatttgggt caaagttgat tcaaagttct
      961 atgaatgctg acgtacatct ctgcttcaaa gttcactatg atatacatca aagttcaaag
     1021 ttcatatctt gacagggtaa caaaattaga ataaacgtta aaggaaaatt gcagcagaac
     1081 ttgagaatga agtaggccag acatgaatct tagtaacggt agatgtataa acaatggttt
     1141 gctgcattca aggtttattg cttcatagcg tttaggatac ttactttgta ccatacgttt
     1201 agtttctaca ttatatcgtt atttcatata taagtttaaa aact
//
LOCUS       XR_011757199             984 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pumilio homolog 7,
            chloroplastic (LOC139840044), transcript variant X5, misc_RNA.
ACCESSION   XR_011757199
VERSION     XR_011757199.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..984
                     /gene="LOC139840044"
                     /note="putative pumilio homolog 7, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840044"
     misc_RNA        1..984
                     /gene="LOC139840044"
                     /product="putative pumilio homolog 7, chloroplastic,
                     transcript variant X5"
                     /db_xref="GeneID:139840044"
ORIGIN      
        1 caaaagcatt gcacttgatt tgacaactta tattatttgt ttgattatat aattagactg
       61 gtaatgttga aacttgtatt atttgtatga ttatagattc ccaaattcta tgtttctttt
      121 atatttgtct tattagggat gcacactttg accttaattg ttggtgcagt tgaaggatca
      181 tacttgatcg agtctaatat ggtcatgtaa gttatgaagg atcatacaag tgtttgaacc
      241 ttcttcaaat gacagcagct caagttcaca ttagataaac agaatgttag agaacatgca
      301 tacgagtgga tttgaagggc tattcaaggt caaccatcat tcgttcgtga gctgatcttg
      361 gctactcact ttgaacagtt gcttcaagat ctgcatgcta actatgttgt tcaaactgct
      421 cttcgtgtgt ctgagggtcc gattcataac ttgctggtgc gtgtgattga atcccacaag
      481 gcaatctcac gaaatagccc gtattcaaag tggattttct cacgcaagtt gttaaagatg
      541 tgaatgtatg atgatagtgt attaatgctg tttcatgtgt cagttagagt tcgaatcatt
      601 atagtgataa acggctcctc gattacaaga tcgtgttgtt aacattttcg ttttacgagt
      661 catagagtaa aacaaatttg ggtcaaagtt gattcaaagt tctatgaatg ctgacgtaca
      721 tctctgcttc aaagttcact atgatataca tcaaagttca aagttcatat cttgacaggg
      781 taacaaaatt agaataaacg ttaaaggaaa attgcagcag aacttgagaa tgaagtaggc
      841 cagacatgaa tcttagtaac ggtagatgta taaacaatgg tttgctgcat tcaaggttta
      901 ttgcttcata gcgtttagga tacttacttt gtaccatacg tttagtttct acattatatc
      961 gttatttcat atataagttt aaaa
//
LOCUS       XR_011757200             958 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pumilio homolog 7,
            chloroplastic (LOC139840044), transcript variant X6, misc_RNA.
ACCESSION   XR_011757200
VERSION     XR_011757200.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..958
                     /gene="LOC139840044"
                     /note="putative pumilio homolog 7, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840044"
     misc_RNA        1..958
                     /gene="LOC139840044"
                     /product="putative pumilio homolog 7, chloroplastic,
                     transcript variant X6"
                     /db_xref="GeneID:139840044"
ORIGIN      
        1 aaaagcattg cacttgattt gacaacttat attatttgtt tgattatata attagactgg
       61 taatgttgaa acttgtatta tttgtatgat tatagattcc caaattctat gtttctttta
      121 tatttgtctt attagggatg cacactttga ccttaattgt tggtgcagtt gaaggatcat
      181 acttgatcga gtctaatatg gtcatgtaag ttatgaagga tcatacaagt gtttgaacct
      241 tcttcaaatg acagcagctc aagttcacat tagataaaca gaatgttaga gaacatgcat
      301 acgagtggat ttgaagggct attcaaggtt ggtctcttgg tgtcttcaaa ttttgcttca
      361 agatctgcat gctaactatg ttgttcaaac tgctcttcgt gtgtctgagg gtccgattca
      421 taacttgctg gtgcgtgtga ttgaatccca caaggcaatc tcacgaaata gcccgtattc
      481 aaagtggatt ttctcacgca agttgttaaa gatgtgaatg tatgatgata gtgtattaat
      541 gctgtttcat gtgtcagtta gagttcgaat cattatagtg ataaacggct cctcgattac
      601 aagatcgtgt tgttaacatt ttcgttttac gagtcataga gtaaaacaaa tttgggtcaa
      661 agttgattca aagttctatg aatgctgacg tacatctctg cttcaaagtt cactatgata
      721 tacatcaaag ttcaaagttc atatcttgac agggtaacaa aattagaata aacgttaaag
      781 gaaaattgca gcagaacttg agaatgaagt aggccagaca tgaatcttag taacggtaga
      841 tgtataaaca atggtttgct gcattcaagg tttattgctt catagcgttt aggatactta
      901 ctttgtacca tacgtttagt ttctacatta tatcgttatt tcatatataa gtttaaaa
//
LOCUS       XR_011757201             931 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pumilio homolog 7,
            chloroplastic (LOC139840044), transcript variant X7, misc_RNA.
ACCESSION   XR_011757201
VERSION     XR_011757201.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..931
                     /gene="LOC139840044"
                     /note="putative pumilio homolog 7, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840044"
     misc_RNA        1..931
                     /gene="LOC139840044"
                     /product="putative pumilio homolog 7, chloroplastic,
                     transcript variant X7"
                     /db_xref="GeneID:139840044"
ORIGIN      
        1 aaaagcattg cacttgattt gacaacttat attatttgtt tgattatata attagactgg
       61 taatgttgaa acttgtatta tttgtatgat tatagattcc caaattctat gtttctttta
      121 tatttgtctt attagggatg cacactttga ccttaattgt tggtgcagtt gaaggatcat
      181 acttgatcga gtctaatatg gtcatgtaag ttatgaagga tcatacaagt gtttgaacct
      241 tcttcaaatg acagcagctc aagttcacat tagataaaca gaatgttaga gaacatgcat
      301 acgagtggat ttgaagggct attcaagttg cttcaagatc tgcatgctaa ctatgttgtt
      361 caaactgctc ttcgtgtgtc tgagggtccg attcataact tgctggtgcg tgtgattgaa
      421 tcccacaagg caatctcacg aaatagcccg tattcaaagt ggattttctc acgcaagttg
      481 ttaaagatgt gaatgtatga tgatagtgta ttaatgctgt ttcatgtgtc agttagagtt
      541 cgaatcatta tagtgataaa cggctcctcg attacaagat cgtgttgtta acattttcgt
      601 tttacgagtc atagagtaaa acaaatttgg gtcaaagttg attcaaagtt ctatgaatgc
      661 tgacgtacat ctctgcttca aagttcacta tgatatacat caaagttcaa agttcatatc
      721 ttgacagggt aacaaaatta gaataaacgt taaaggaaaa ttgcagcaga acttgagaat
      781 gaagtaggcc agacatgaat cttagtaacg gtagatgtat aaacaatggt ttgctgcatt
      841 caaggtttat tgcttcatag cgtttaggat acttactttg taccatacgt ttagtttcta
      901 cattatatcg ttatttcata tataagttta a
//
LOCUS       XR_011757202            1561 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative lipase ROG1
            (LOC139840046), transcript variant X1, misc_RNA.
ACCESSION   XR_011757202
VERSION     XR_011757202.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1561
                     /gene="LOC139840046"
                     /note="putative lipase ROG1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840046"
     misc_RNA        1..1561
                     /gene="LOC139840046"
                     /product="putative lipase ROG1, transcript variant X1"
                     /db_xref="GeneID:139840046"
ORIGIN      
        1 tattaacctt ctacgtgatc ataatatcct tatttaccca cacttttaat taattaatat
       61 attataatca tttgaaaatt cagtatatat ttgctgaaat cgtattattt cttcaataat
      121 tcgtgaattt cacagtaaaa tatcgcatgc tgtaataaaa tgaaaaacga agatatttgc
      181 tcatcggaga cggtcgccgg cggcgaaaat gtattcagtt gtgatgcatc tgatgtttct
      241 tccgccgatc atctcgttgt tatggtcaat ggaatccttg gaagttctgc agattggaaa
      301 tttgctgcag agcagtttgt caagtcgcta ccagaccgag tctttgttca tcgcagtgaa
      361 aggaatgcag catctcaaac attggatggt gtagatgtaa tgggcgagcg attatctcaa
      421 gaggttctag aagtgattaa ggaaaagcca aatcttcgta agatatcttt tgttgcacat
      481 tctgtgggag gtttagtggc aagatatgct attggaagat tgtataagcc tccaagtgta
      541 aattcagggg atttatcagt tgaaaattgt gaggacgcaa aggccaccat tggtggtctg
      601 gttccaataa acttcatcac tgttgcaaca cctcatctag gttcaagggg aaataagcag
      661 gtgccttttc ttttcggtgt atctgccttg gaaaagacag ctgttcttgt tatacattgg
      721 atatttagaa gaacgggtcg gcaccttttc cttacagata atgatgaagg aaagcctcca
      781 ctacttaaac gcatgttgga agatgatggt gattgttatt tcatgtcagc attacgctca
      841 ttccatcgcc gggttacata tgcaaatgtt ggctatgacc atattgttgg ctggagaact
      901 tcatcaatta ggcgtaacat agaactgcca aagtgggagg attcagtaaa tgagaagtat
      961 cctcatattg tatatgaaga acgttgcaaa gcatgtgact ttgagcagga ttcgacagtg
     1021 gttgataatc cagatgacgt ggaagaggaa ctggtgaccg gcctttctcg tgtatcatgg
     1081 gaaaaagtag atgtcagctt tcacaatagt agatcgaggt ttgctgctca tagtgttatt
     1141 caggtgaaga atcacaacct gcatacagat ggggccgatg ttattcaaca tatgatcgat
     1201 catttttgtc tctaacgata gtcctgcaaa gttatctaat accagggtca tgactttgag
     1261 catctttcgt aaaggaagta tgagttcaaa tgtggcccat tgaacataca agtgatataa
     1321 tgtgtagttt gtaaagaata tatggtatta tcgttggaac gcactgtagt aacaaattat
     1381 tttgtatttc cttataaatc ttagctcccg tcctgttaca aaaatattca cgcttaatca
     1441 ttgtttggga tttgggatca tcacatactt gtaactttca tggcatctag cagctagcat
     1501 ctgtgtggtg gctgatgaag ttaaaattat aaatgaaatg cgaaaacgct catgatatat
     1561 a
//
LOCUS       XR_011757203            1469 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative lipase ROG1
            (LOC139840046), transcript variant X2, misc_RNA.
ACCESSION   XR_011757203
VERSION     XR_011757203.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1469
                     /gene="LOC139840046"
                     /note="putative lipase ROG1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840046"
     misc_RNA        1..1469
                     /gene="LOC139840046"
                     /product="putative lipase ROG1, transcript variant X2"
                     /db_xref="GeneID:139840046"
ORIGIN      
        1 ttttttttat tttttattaa tcaccctccc tctcaacttc cagtaaaata tcgcatgctg
       61 taataaaatg aaaaacgaag atatttgctc atcggagacg gtcgccggcg gcgaaaatgt
      121 attcagttgt gatgcatctg atgtttcttc cgccgatcat ctcgttgtta tggtcaatgg
      181 aatccttgga agttctgcag attggaaatt tgctgcagag cagtttgtca agtcgctacc
      241 agaccgagtc tttgttcatc gcagtgaaag gaatgcagca tctcaaacat tggatggtgt
      301 agatgtaatg ggcgagcgat tatctcaaga ggttctagaa gtgattaagg aaaagccaaa
      361 tcttcgtaag atatcttttg ttgcacattc tgtgggaggt ttagtggcaa gatatgctat
      421 tggaagattg tataagcctc caagtgtaaa ttcaggggat ttatcagttg aaaattgtga
      481 ggacgcaaag gccaccattg gtggtctggt tccaataaac ttcatcactg ttgcaacacc
      541 tcatctaggt tcaaggggaa ataagcaggt gccttttctt ttcggtgtat ctgccttgga
      601 aaagacagct gttcttgtta tacattggat atttagaaga acgggtcggc accttttcct
      661 tacagataat gatgaaggaa agcctccact acttaaacgc atgttggaag atgatggtga
      721 ttgttatttc atgtcagcat tacgctcatt ccatcgccgg gttacatatg caaatgttgg
      781 ctatgaccat attgttggct ggagaacttc atcaattagg cgtaacatag aactgccaaa
      841 gtgggaggat tcagtaaatg agaagtatcc tcatattgta tatgaagaac gttgcaaagc
      901 atgtgacttt gagcaggatt cgacagtggt tgataatcca gatgacgtgg aagaggaact
      961 ggtgaccggc ctttctcgtg tatcatggga aaaagtagat gtcagctttc acaatagtag
     1021 atcgaggttt gctgctcata gtgttattca ggtgaagaat cacaacctgc atacagatgg
     1081 ggccgatgtt attcaacata tgatcgatca tttttgtctc taacgatagt cctgcaaagt
     1141 tatctaatac cagggtcatg actttgagca tctttcgtaa aggaagtatg agttcaaatg
     1201 tggcccattg aacatacaag tgatataatg tgtagtttgt aaagaatata tggtattatc
     1261 gttggaacgc actgtagtaa caaattattt tgtatttcct tataaatctt agctcccgtc
     1321 ctgttacaaa aatattcacg cttaatcatt gtttgggatt tgggatcatc acatacttgt
     1381 aactttcatg gcatctagca gctagcatct gtgtggtggc tgatgaagtt aaaattataa
     1441 atgaaatgcg aaaacgctca tgatatata
//
LOCUS       XM_071830269            1543 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative lipase ROG1
            (LOC139840046), transcript variant X3, mRNA.
ACCESSION   XM_071830269
VERSION     XM_071830269.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1543
                     /gene="LOC139840046"
                     /note="putative lipase ROG1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840046"
     CDS             160..1215
                     /gene="LOC139840046"
                     /codon_start=1
                     /product="putative lipase ROG1"
                     /protein_id="XP_071686370.1"
                     /db_xref="GeneID:139840046"
                     /translation="MKNEDICSSETVAGGENVFSCDASDVSSADHLVVMVNGILGSSA
                     DWKFAAEQFVKSLPDRVFVHRSERNAASQTLDGVDVMGERLSQEVLEVIKEKPNLRKI
                     SFVAHSVGGLVARYAIGRLYKPPSVNSGDLSVENCEDAKATIGGLVPINFITVATPHL
                     GSRGNKQVPFLFGVSALEKTAVLVIHWIFRRTGRHLFLTDNDEGKPPLLKRMLEDDGD
                     CYFMSALRSFHRRVTYANVGYDHIVGWRTSSIRRNIELPKWEDSVNEKYPHIVYEERC
                     KACDFEQDSTVVDNPDDVEEELVTGLSRVSWEKVDVSFHNSRSRFAAHSVIQVKNHNL
                     HTDGADVIQHMIDHFCL"
     misc_feature    238..909
                     /gene="LOC139840046"
                     /note="Putative serine esterase (DUF676); Region: DUF676;
                     pfam05057"
                     /db_xref="CDD:309968"
ORIGIN      
        1 tattaacctt ctacgtgatc ataatatcct tatttaccca cacttttaat taattaatat
       61 attataatca tttgaaaatt cagtatatat ttgctgaaat cgtattattt cttcaataat
      121 tcgtgaattt cacagtaaaa tatcgcatgc tgtaataaaa tgaaaaacga agatatttgc
      181 tcatcggaga cggtcgccgg cggcgaaaat gtattcagtt gtgatgcatc tgatgtttct
      241 tccgccgatc atctcgttgt tatggtcaat ggaatccttg gaagttctgc agattggaaa
      301 tttgctgcag agcagtttgt caagtcgcta ccagaccgag tctttgttca tcgcagtgaa
      361 aggaatgcag catctcaaac attggatggt gtagatgtaa tgggcgagcg attatctcaa
      421 gaggttctag aagtgattaa ggaaaagcca aatcttcgta agatatcttt tgttgcacat
      481 tctgtgggag gtttagtggc aagatatgct attggaagat tgtataagcc tccaagtgta
      541 aattcagggg atttatcagt tgaaaattgt gaggacgcaa aggccaccat tggtggtctg
      601 gttccaataa acttcatcac tgttgcaaca cctcatctag gttcaagggg aaataagcag
      661 gtgccttttc ttttcggtgt atctgccttg gaaaagacag ctgttcttgt tatacattgg
      721 atatttagaa gaacgggtcg gcaccttttc cttacagata atgatgaagg aaagcctcca
      781 ctacttaaac gcatgttgga agatgatggt gattgttatt tcatgtcagc attacgctca
      841 ttccatcgcc gggttacata tgcaaatgtt ggctatgacc atattgttgg ctggagaact
      901 tcatcaatta ggcgtaacat agaactgcca aagtgggagg attcagtaaa tgagaagtat
      961 cctcatattg tatatgaaga acgttgcaaa gcatgtgact ttgagcagga ttcgacagtg
     1021 gttgataatc cagatgacgt ggaagaggaa ctggtgaccg gcctttctcg tgtatcatgg
     1081 gaaaaagtag atgtcagctt tcacaatagt agatcgaggt ttgctgctca tagtgttatt
     1141 caggtgaaga atcacaacct gcatacagat ggggccgatg ttattcaaca tatgatcgat
     1201 catttttgtc tctaacgata gtcctgcaaa gttatctaat accagggtca tgactttgag
     1261 catctttcgt aaaggtaaat tctcgaccac ttcagcagag ttagatttgg agttttataa
     1321 aatctagtag tcattttttg tcactagtat aggttgaaag tttggttttt tgggtactgg
     1381 gtgaaatggt caattgggtt gacctcaaat tgttctaatt ccgcaaaatc tgtaaaataa
     1441 ctactgtaat gatccatgat tgtgatcaca agtgatttag gaggttatat gcacaagaag
     1501 tacactttag ggaccattga acataattgt aaacgtatgt tgc
//
LOCUS       XM_071830271            2943 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamine--tRNA ligase-like
            (LOC139840047), mRNA.
ACCESSION   XM_071830271
VERSION     XM_071830271.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2943
                     /gene="LOC139840047"
                     /note="glutamine--tRNA ligase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139840047"
     CDS             133..2484
                     /gene="LOC139840047"
                     /codon_start=1
                     /product="glutamine--tRNA ligase-like"
                     /protein_id="XP_071686372.1"
                     /db_xref="GeneID:139840047"
                     /translation="MVEALDLFLKIGLDKRTAENTIANNKVTTNLIAVINEAAVTDGC
                     ERSTGNLLYTVATKFPANALMHRPKLLEYIVSSKIKTPAQLEAAFAFLSVTASEDLDI
                     NKFEEACGVGVEVSEHDIKCVVDEMFKEKESAIVEQRYRTNVGDLFAHVRKKLPWADP
                     KIVKKLIDEKILALLGPKTEADNEKPVKKKKEKPVKVEVKSNKEEDPQSEEELNPYSI
                     FPAPEDNYKVHTEVTFSDGRVFRACNSKSLLEKHLKITGGKVLTRFPPEPNGYLHIGH
                     AKAMFVDFGLAKERSGGCYLRFDDTNPEAEKKEYIDHIKEIVDWMGWKPYQITYTSNY
                     FQELYDLAVELIRRGHAYVDHQTGDEIKEYREKKMNSPWRDRPISESLKLFDDMKRGL
                     IEEGKATLRMKQDMQSDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLE
                     NITHSLCTLEFETRRASYYWLLDALNLYQPYVWEYSRLNITNTVMSKRKLNRLVTENY
                     VDGWDDPRLMTLAGLRRRGVTATAINTFVKGIGITRSDGSMIQLERLEYHVREELNKT
                     ASRTMVVLHPLKVVITNLEPSSVIDLDAKKWPDAPVDDASSYYKVPFSSVVYIEQTDF
                     RMKDSKDYYGLAPGKTVLLRYAFPIKCTEVVLSEDKQSVVEIHVEYDPDKTTKPKGVL
                     HWVAEPSPGVDPLKVEVRLFDKLFLSENPGELDNWLDDLNPESKVVIPSAYAVPSLKN
                     AEVDDKFQFERLGYFVADKDSTPEKLIFNRTVTLRDSYGKAWK"
     misc_feature    133..2481
                     /gene="LOC139840047"
                     /note="glutamine-tRNA ligase; Region: PLN02859"
                     /db_xref="CDD:178450"
ORIGIN      
        1 agttgcaatt tttcgacaag tgcctaaggt ttatattcta gggttttaaa tttcgtgctt
       61 ataaattgac gatctttaca cgcaatttca acagttatac gacttattcc ggtatcatcg
      121 ccgccggaaa aaatggtgga agcacttgat ttgtttctga agatcggatt agataaacga
      181 actgctgaaa acacaatagc caataataaa gtcaccacca atcttatcgc tgttattaac
      241 gaggctgctg tgactgatgg atgtgaacgt tctactggca atctccttta tacggttgct
      301 acaaagtttc ctgctaatgc gcttatgcac aggcctaaat tgcttgaata cattgtttct
      361 tctaagataa agactcctgc tcagctagaa gctgcatttg catttctgtc ggttactgct
      421 tcagaagatc ttgatatcaa taaatttgaa gaagcttgtg gagttggggt tgaggtctct
      481 gaacatgata taaagtgcgt tgttgatgaa atgtttaaag agaaagagag tgcaatcgtg
      541 gagcaacgct accgaacaaa tgttggtgat ctgtttgctc atgtgcgaaa gaagctacct
      601 tgggcagatc caaagattgt caagaaactt atagatgaaa agatacttgc attacttggt
      661 ccaaaaactg aagcagataa tgagaagcct gttaaaaaga agaaagaaaa acctgttaaa
      721 gtagaggtta aaagcaacaa agaagaagat cctcaatctg aagaagagct caatccatat
      781 tcaatattcc ctgcaccaga ggataattat aaggttcaca ctgaagttac tttcagtgat
      841 ggacgtgtgt ttcgagcttg caactccaaa tcactactag aaaagcattt gaagataact
      901 ggagggaaag ttcttacccg ttttccacca gaaccaaatg gatacctcca tattggtcat
      961 gccaaggcta tgtttgttga cttcggcctt gcgaaagaga gaagtggtgg ctgctacctg
     1021 aggtttgatg atactaatcc tgaagcagag aaaaaagaat atattgatca tatcaaagaa
     1081 attgtggatt ggatggggtg gaagccttat cagataacgt acacaagtaa ttattttcaa
     1141 gaactatatg atttagcagt ggagctcatt cgcaggggtc atgcttatgt cgatcaccag
     1201 actggggacg agataaaaga gtatagagag aaaaagatga acagtccatg gagagatagg
     1261 ccgatatcag aatcacttaa actttttgat gatatgaaac gtggcttgat tgaggaagga
     1321 aaagctactc ttagaatgaa acaagatatg cagagtgaca attttaatat gtatgacctc
     1381 attgcatatc gaatcaagtt tactcctcat ccgcatgctg gagacaagtg gtgtatctac
     1441 ccaagttatg attatgcaca ctgcattgtc gattctcttg aaaatatcac acattctctt
     1501 tgcacacttg aatttgagac acgtcgtgct tcatactact ggttgctgga tgcattgaac
     1561 ctttaccagc cttatgtgtg ggaatattca cgcttgaata tcaccaacac tgtcatgtca
     1621 aaacgtaaat taaatcgtct tgtgactgag aattatgtgg acggatggga tgatcctcgc
     1681 ttgatgacgc tagcggggtt gcggcgtagg ggtgtcacag caaccgcaat aaacactttt
     1741 gttaaaggaa ttggtattac tagaagtgat ggtagtatga tacaattgga acgcctcgag
     1801 tatcacgtac gggaagaact aaataaaaca gcttctcgca cgatggttgt gttacatcca
     1861 ctaaaggttg ttattaccaa tcttgagccc agttctgtga tagaccttga tgcaaagaaa
     1921 tggcctgatg ccccggttga tgacgcatca tcttactaca aggttccatt ttcaagtgtt
     1981 gtttatatcg agcaaactga ctttagaatg aaagattcaa aagattacta tggtcttgct
     2041 cctgggaaga ctgtcctact cagatatgca tttcctatca agtgtactga agttgttctt
     2101 tctgaagaca aacagagtgt tgttgaaata catgttgagt atgatcctga caagacaacg
     2161 aaaccaaagg gtgttcttca ttgggttgca gagccttctc ctggggttga cccactgaag
     2221 gtggaagtca gactatttga taaactgttt ctctctgaga atcctggaga attagataat
     2281 tggcttgacg atttaaaccc cgagtctaaa gtggtaatcc caagtgcata tgctgtaccg
     2341 tctcttaaaa atgctgaggt tgatgacaaa ttccagtttg aaaggcttgg ctattttgtg
     2401 gcagacaagg attcaacacc agaaaagctc atctttaacc ggactgttac tttaagggac
     2461 agctatggca aagcctggaa gtaggcaagt ttgtttaagc atttacatac tttagtcata
     2521 tgaaagtttc gatttacttg ttatttttaa tatttatggt ttatggttga tctgaaacgg
     2581 aagaaacaaa ttgaaaaaag ctttagtctt taactcaaaa tgtttgtcgt ttgggattta
     2641 ttcaactttt gtcacatata cattcagtga tgtttatgtt taaaatggta tcttgcaact
     2701 tgagaagtat cagggaccaa agtcttttaa tttagtgtat tcccggtatt ttaaggaagc
     2761 agccaccatc aatcagcctg tgtgtctgat aagtcgtagt tagaaaagac caaattgaaa
     2821 ttgaagagtt tgttttgggt agatgcaata cagattatct aactattatg tatgagatga
     2881 gatgccaatg gctccaaatg cagcaagcat cacaagtaaa ctctctaagt gcagcctcta
     2941 atg
//
LOCUS       XM_071830272            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYB62-like (LOC139840048), mRNA.
ACCESSION   XM_071830272
VERSION     XM_071830272.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139840048"
                     /note="transcription factor MYB62-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139840048"
     CDS             112..960
                     /gene="LOC139840048"
                     /codon_start=1
                     /product="transcription factor MYB62-like"
                     /protein_id="XP_071686373.1"
                     /db_xref="GeneID:139840048"
                     /translation="MGASKKMTNEKLVLDELRKGPWTLDEDNLLVHYITCHGEGRWNS
                     LAKSSGLKRTGKSCRLRWLNYLKPDVKHGNLTPQEQIMILELHSKWGNRWSKIAQQLP
                     GRTDNEIKNYWRTKVQKQARHLKIDSNNKKFVEALRQFWLPRLLEKVDKNNSPSSSTT
                     TTTSTSTMITNQINLCSKPRVKESPIMETTISSSSIYSSNDTRIMSPYLPESVQQSNG
                     YFVDNGNSDVTSFNQSNIQELRSNDTTMLDFQLAGVDWMSNEVADISFWNMDELWQFR
                     SNNEIC"
     misc_feature    157..>507
                     /gene="LOC139840048"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03091"
                     /db_xref="CDD:215570"
ORIGIN      
        1 acccttaatc attccaaagc caaaaatatc acaaccatct acagtttctc tcccttttta
       61 cacattacta ttactttaac tttttatttc aaatctattt aactttattt catgggggct
      121 tctaaaaaga tgactaatga aaagttagta cttgatgagc taagaaaagg gccatggaca
      181 cttgatgaag acaaccttct tgttcattac atcacttgtc atggcgaagg acgttggaac
      241 tccctagcaa aatcttccgg gttaaaaaga acgggaaaaa gttgcaggct aagatggttg
      301 aattatctaa aaccggacgt gaaacatgga aatcttacac cacaagaaca aatcatgatc
      361 cttgaacttc attccaaatg gggcaataga tggtcgaaaa ttgcacaaca attgcctgga
      421 agaacagata acgagatcaa gaattactgg cgaacaaaag tacaaaagca agctcgtcat
      481 cttaagattg actcaaacaa caagaaattt gttgaagccc ttagacaatt ttggctacca
      541 agattgcttg aaaaagtgga taaaaataat tcaccatcat catcaacaac aacaacaact
      601 tctacatcaa ctatgattac taatcaaatc aacttatgct caaaaccacg agtcaaagaa
      661 agtccaataa tggagactac aatttctagc tcgagcattt attcatcaaa cgatacgagg
      721 attatgtcgc cgtacttgcc cgaaagtgta caacaaagca atggttactt tgttgataat
      781 ggtaactctg acgtgacaag ttttaaccag tcaaacattc aagaattgcg gtcgaacgat
      841 acgacaatgt tagatttcca actggcaggg gttgattgga tgagcaacga ggtagcagat
      901 atatctttct ggaacatgga tgaattgtgg caattcagaa gtaataatga aatatgttga
      961 tattgttgta aatttagtag ttaaatatga atggtaatta gtcaaatatg gatagtaaaa
     1021 tttgtactat atatatgtgc ataatgtaag ttacaaaaac acacatatac attaaataca
     1081 tcacacctc
//
LOCUS       XM_071830273            3123 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome non-ATPase
            regulatory subunit 2 homolog A-like (LOC139840049), mRNA.
ACCESSION   XM_071830273
VERSION     XM_071830273.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3123
                     /gene="LOC139840049"
                     /note="26S proteasome non-ATPase regulatory subunit 2
                     homolog A-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139840049"
     CDS             159..2828
                     /gene="LOC139840049"
                     /codon_start=1
                     /product="26S proteasome non-ATPase regulatory subunit 2
                     homolog A-like"
                     /protein_id="XP_071686374.1"
                     /db_xref="GeneID:139840049"
                     /translation="MNPESNNTNPPASAKEEAALKKDQKKKDEKKDEDLSEEDLALKQ
                     QLELYVERVSDPDLGLQKVALESMRQEIRTSTSSMTSVPKPLKFLRPHYPTLKAHYET
                     MPESDLKKLLADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQ
                     EYSKRVNEEVTTDDVIELVEQIVAFHMKHNAEPEAVDLLMEVEFLDLLVKHVDKTNFR
                     RTCLYLTSSARYLPGPDDVSVLDIAYTLYTKFEEFPRALQIALYLDNMQYVRQVFTSC
                     PDLLRKKQFCYILARQGISFEIDDEICDDDDDREALQEIVNSTKLSEGYLTLARDIEV
                     MEPKSPEDIYKAHLLDGRASASANVDSARQNLAATFVNAFVNAGFGQDKLMTVASEAS
                     SGGSSGNWLFKNKEHGKASAAASLGMINLWDVDTGLAQLDKYFHSNDNHVIAGALLGV
                     GVVNCGIKNDCDPALALLADYLDKEDSSIRIGAITGLGLAYAGTQNEQIRDKLTPILG
                     DPKAPLDVIAFTAISLGLVYVGSCNEEVAQAIIFALMDKSESDLGEPLTRLLILGLGL
                     LYLGKQDSVEATAEVSKTFNDKIRKYCDMTLLSCAYAGTGNVLKVQHFLGQCAQHLEK
                     GETFQGPAVLGIAMVAMAEELGLDMAIRSLEHLLQYGEQNIRKAVPLALGLLCISNPK
                     VHVMDTLSRLSHDADTEVAMAAVISLGLIGAGTNNARIAGMLRNLSSYYYKEASLLFC
                     VRIAQGFVHMGKGLMTLAPYHSERFLLSPTALAGLVVLLHASLDMKAIILGKYHYVLY
                     FVVLAMQPRMLLTVDENLKPLSVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAG
                     DRAELATEKYIPLSPILEGFVILKENPDYREEA"
     misc_feature    162..2822
                     /gene="LOC139840049"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: RPN1; COG5110"
                     /db_xref="CDD:227441"
ORIGIN      
        1 caaaaataaa gtatcgaact ttcttgggga aaaagcattc gactacttag ctctcattct
       61 tctttcaatc cgtcacttca tctcacacat aaaatcatca cacaacaatt tcagcatcaa
      121 attcggctaa ttagggtttc aattttgacc tatccacaat gaatcctgaa tcaaacaaca
      181 ctaatcctcc cgctagcgct aaagaagaag ccgctttgaa gaaagatcaa aaaaagaaag
      241 acgaaaagaa agacgaagat ctctctgaag aggatttggc tttgaaacaa caattggagc
      301 tgtatgttga acgagttagc gaccctgatt tagggttaca aaaagttgcc cttgagagca
      361 tgaggcaaga aattcgcacg tcaaccagct ctatgacttc agttcctaag ccattgaagt
      421 ttttgaggcc gcattatcca acactgaaag cgcattatga gacgatgcca gagtcggact
      481 taaagaaact gcttgcagat attctttcgg ttttggcttt gacaatgtct gcagagggtg
      541 aacgggagag tttgaagtat cggttattgg gttctgaagg tgatattggt tcatggggtc
      601 acgagtatgt taggaatttg gctggtgaaa ttgcacaaga gtattcaaaa agagtgaatg
      661 aggaagtaac cacagatgat gtaatagagc tcgtggaaca aattgttgct tttcacatga
      721 agcataatgc tgaacctgaa gctgtagatc tcttaatgga ggttgagttt cttgatttac
      781 tagtaaagca tgttgacaag acaaatttca gaagaacttg tttgtaccta accagttcag
      841 caaggtacct ccctggacca gatgatgtgt ctgttttgga cattgcttac acattataca
      901 caaaatttga agaatttcct agggcacttc agattgcact gtacctcgac aacatgcagt
      961 atgtgaggca ggttttcact tcttgtcccg atctcctacg gaagaagcaa ttttgttaca
     1021 ttcttgcccg acaaggaata agtttcgaga ttgatgatga aatctgtgac gatgatgacg
     1081 atagggaggc gttgcaagaa atcgtcaaca gtactaaact aagtgaaggc tatcttactc
     1141 ttgctcgtga tattgaagtt atggagccca aatccccaga ggatatatat aaggcacatt
     1201 tacttgacgg gcgagcaagt gctagtgcaa atgttgattc ggctaggcaa aatctggcag
     1261 caacgtttgt aaatgcgttt gtgaatgctg gtttcggtca ggataaatta atgacggttg
     1321 catcggaggc atcgagtgga ggatcttctg gaaattggct ttttaaaaac aaagaacatg
     1381 ggaaagcaag tgctgctgca agtttgggaa tgatcaatct ttgggatgtc gacacgggtc
     1441 ttgctcaact tgacaagtac tttcatagca acgataatca tgtgatagct ggtgcattgt
     1501 taggagttgg tgttgtaaac tgtggtatca agaatgactg tgatcctgcc ctggcacttt
     1561 tggctgatta tctggataaa gaagattctt ctattaggat tggtgccata actggtcttg
     1621 gccttgcgta cgcgggcact cagaatgaac agattcggga caaacttaca ccgattcttg
     1681 gagacccaaa agcgccacta gatgttattg cattcaccgc aatttctcta ggtttagtat
     1741 acgtgggttc gtgtaacgag gaggttgcac aggcaataat tttcgctctt atggacaaaa
     1801 gtgagtcgga cttgggagag cccctcactc gattattgat tcttggttta ggtcttctat
     1861 accttgggaa acaggatagt gtagaggcta ctgctgaggt gtcaaaaaca ttcaacgaca
     1921 agatcagaaa gtattgcgat atgaccctgc tttcttgtgc atacgctggt accggaaacg
     1981 ttctaaaggt acagcacttt cttggtcaat gtgcccagca ccttgaaaag ggtgaaactt
     2041 ttcagggtcc agctgtgttg ggtatagcta tggttgcaat ggctgaagaa ctaggtctcg
     2101 atatggcaat ccgttcttta gagcatcttt tgcaatacgg ggaacagaat atccgaaaag
     2161 ccgttccgtt ggctcttggt ctcttatgca tttcaaaccc aaaggttcac gttatggata
     2221 cgttgagtcg actcagtcat gatgctgata cggaagttgc tatggcagca gtgatatctt
     2281 tggggttgat aggcgcagga accaataacg ctagaattgc cggcatgctt cgtaatcttt
     2341 caagctatta ctacaaagaa gccagtcttc ttttttgtgt tcgaattgca caaggttttg
     2401 tacatatggg gaagggttta atgactcttg ctccctacca ctcggaacga ttcttacttt
     2461 ccccgacggc cttggctgga cttgtagtgc tacttcatgc atctcttgat atgaaagcta
     2521 tcatcttggg aaaatatcac tatgttctct acttcgtcgt tttggctatg cagcctagga
     2581 tgttgttgac cgtggatgaa aatctgaaac ctttatccgt accagttagg gtaggacaag
     2641 ccgttgatgt tgtgggtcag gcgggtcggc ccaagaccat cactgggttt cagacccatt
     2701 cgaccccagt ccttttggct gctggggata gggctgaact tgctacagag aagtatattc
     2761 ctctgtctcc tattctggaa ggatttgtta ttttgaagga gaacccagat tacagggaag
     2821 aagcctagac acaccaagtg ggttttaatg aaaaatctaa attaagatac tcccagtggg
     2881 acacagacac gcctgatgtt aaagttgtat cttattggtt atgtagcttg tggatttttg
     2941 ttgtttatgt tgatgttcaa attatgcccg atgatgtcaa aatagattta caaatttgtt
     3001 catgaactga gcggtaaagc tatttggcat cataaacatg tatacactct gtttgactat
     3061 gttttcttcc aacaaggtag atcattctct aaatgtttgt atttttttct gctctgcttt
     3121 gct
//
LOCUS       XM_071830274            1531 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides caffeoylshikimate
            esterase-like (LOC139840050), mRNA.
ACCESSION   XM_071830274
VERSION     XM_071830274.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1531
                     /gene="LOC139840050"
                     /note="caffeoylshikimate esterase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139840050"
     CDS             124..1272
                     /gene="LOC139840050"
                     /codon_start=1
                     /product="caffeoylshikimate esterase-like"
                     /protein_id="XP_071686375.1"
                     /db_xref="GeneID:139840050"
                     /translation="MSHSLISTFRPSAHHQLLRRQTSDFSGLPTFRRDFIIMAKKKEI
                     EGVSDQMNAIASQNLDQAPARRRVRLAFTQVQQQLDHVLFKMAPTGIRTEEWFEMNSK
                     GQEIFCKSWLPRPGVRIKAAVCFVHGYGDTCTFFFEGIAKRIAALGYGVYAIDHPGFG
                     LSEGLHGYVSNFNDIVDNVIEQYTKIKGRPEVRGLPRFLLGQSMGGAVALKVHLKEQR
                     EWDGVVLVAPMCKISEEMKPPEPLQKVLIFLSRLMPKAKLVPQKDLGELAFRISQKRK
                     LADYNVISYSDQTRLKTAVELLNATNELESQVEKVSAPLLILHGGADKVTDPNISKFL
                     YEKAASKDKTLKLYDGSYHCILEGESDERIFEVLDDITAWLDSHCSVR"
     misc_feature    229..1263
                     /gene="LOC139840050"
                     /note="hydrolase; alpha/beta fold family protein; Region:
                     PLN02385"
                     /db_xref="CDD:215216"
ORIGIN      
        1 ttggtataaa tatacctgga aatctcaact aattccacca ttaacgatgc tcttttcttc
       61 cccaaattct caacttcatt tctactttca actaccacca gtaacaatct catcatctcc
      121 ttcatgtctc actctctgat ctctactttc cgaccatcgg ctcaccacca attactccgg
      181 cgacagactt ccgacttttc cggtttacct actttccgtc gtgattttat aattatggcg
      241 aagaaaaagg aaatcgaagg tgtgagtgat cagatgaatg cgatcgcgtc acaaaacctc
      301 gatcaagcac ctgctcgccg tagagtgaga ttagctttta ctcaagttca acaacaactt
      361 gatcatgtcc tctttaagat ggctcctact ggaatcagga ctgaagagtg gtttgagatg
      421 aactcaaaag gtcaagaaat tttctgtaaa agttggttac caaggcctgg agttcgaatc
      481 aaagcagccg tgtgttttgt ccatggatat ggtgatactt gcactttttt ctttgaaggc
      541 attgcaaaga gaattgctgc tttgggttac ggtgtttatg ccattgatca tcctggtttt
      601 ggcctctctg aagggctgca cggctatgtt tctaatttta acgatatagt tgacaatgta
      661 attgaacaat acacaaaaat caaaggaaga cccgaagtca gagggctgcc ccggtttctt
      721 ctaggtcagt caatgggagg tgcggtcgca ctcaaagttc atcttaaaga acaacgagaa
      781 tgggacggtg tagttcttgt ggctccaatg tgcaaaattt cagaggaaat gaagcctcca
      841 gaaccactac agaaagtttt aatcttttta tcaagactta tgccaaaagc aaaacttgtt
      901 ccacaaaaag atctaggcga gctcgctttt agaatctctc agaaacgaaa attagcggat
      961 tacaatgtca ttagttactc tgatcagacg agattaaaga ctgctgttga acttttaaat
     1021 gcaacaaacg aactcgaatc acaagtggaa aaggtttcgg cgccattgtt gattcttcat
     1081 ggaggtgcag acaaggtaac agatccgaat atcagcaagt tcctatacga aaaggctgct
     1141 agtaaagata aaactttgaa actttatgat ggaagttatc attgcattct tgaaggtgaa
     1201 tctgatgaga gaatatttga ggtacttgat gatattactg cgtggcttga ttctcattgt
     1261 tctgttcgat agcagatttt aagttacaag ttattgaagt taagtaatta tgtttgagtt
     1321 gcaccaaagc aatgcgtttg agaagataga tcggattctt tattcatttt gtaccatttt
     1381 ttgaggaatt tttagtgtaa catttatgtt atttgtatgt aacaattggg atcgatttcc
     1441 atgggaaaat cattgttttc atgtttatgt tacttgtagt ttgagactaa ataatgatgt
     1501 tatttatatt tatatagtaa tagtaacgat t
//
LOCUS       XM_071830275            1235 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uroporphyrinogen-III
            synthase, chloroplastic-like (LOC139840051), transcript variant X1,
            mRNA.
ACCESSION   XM_071830275
VERSION     XM_071830275.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1235
                     /gene="LOC139840051"
                     /note="uroporphyrinogen-III synthase, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139840051"
     CDS             77..967
                     /gene="LOC139840051"
                     /codon_start=1
                     /product="uroporphyrinogen-III synthase,
                     chloroplastic-like isoform X1"
                     /protein_id="XP_071686376.1"
                     /db_xref="GeneID:139840051"
                     /translation="MNSLLFSLSTTLSPPLQPPTHRRRLQFQPLNIRASSPTTSFSNN
                     RVVVTRERGKNGKLIKALAAQGINFLELPLIQHTHLPDLDRLSALLTATTFDWIIITS
                     PEAALVFLDAWRAAGSPSVKVAVVGAGTASVFNETTNSSKRFIDVAFVPSKATGKVLA
                     SELPKHGNEICSVLYPASAKASQDIEEGLSKRGFQVTRLNTYTTESVQHVDQMIFEQA
                     LSASVVAVASPSAIRAWMNLVPDSKQWDGSVACIGETTATAAKRMGLRNVYYPSSPGL
                     QGWVDSIIDALSAHKQVQKV"
     misc_feature    212..925
                     /gene="LOC139840051"
                     /note="Uroporphyrinogen-III synthase (HemD) catalyzes the
                     asymmetrical cyclization of tetrapyrrole (linear) to
                     uroporphyrinogen-III, the fourth step in the biosynthesis
                     of heme. This ubiquitous enzyme is present in eukaryotes,
                     bacteria and archaea. Mutations in...; Region: HemD;
                     cd06578"
                     /db_xref="CDD:119440"
     misc_feature    order(224..226,380..388,461..463,608..610,680..682,
                     686..688,755..769)
                     /gene="LOC139840051"
                     /note="active site"
                     /db_xref="CDD:119440"
     polyA_site      1235
                     /gene="LOC139840051"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agttatcaaa caggtgttag gctaaaatca aagtcaaacc aacacattct ccaccaccgt
       61 tcaacgtttg accgccatga attcacttct attttctctc tccaccactc tttctccgcc
      121 gctacaacct ccgactcacc gccggcgact tcaatttcaa ccgttgaaca taagagcttc
      181 ttctccgacg acgtcgtttt cgaataatcg agttgttgtt acgagagagc gtggtaaaaa
      241 tggcaaactc atcaaagctc ttgcagcaca agggatcaat tttttagaac ttcccctgat
      301 tcagcatacg cacttgcctg atctggacag actttcggcc ctattgactg ccactacttt
      361 tgattggatc attataactt cacccgaagc ggctttggtc tttcttgacg cctggagagc
      421 tgctggatcg ccaagtgtca aggtagcagt ggttggagct ggtactgcaa gcgtatttaa
      481 tgaaactaca aattcgtcca agagattcat tgatgttgct tttgttccat caaaagcaac
      541 tggcaaggtt cttgcttccg agctacccaa acatgggaat gaaatatgta gtgttttata
      601 tccagcttct gcaaaagcta gtcaggacat agaggaaggt ctctccaaac gtggatttca
      661 agtcacgcgt ttaaatactt acaccacgga aagtgttcaa catgtggacc aaatgatttt
      721 tgaacaagca ctctctgctt ctgttgtcgc tgtagcttca ccttctgcaa ttagagcatg
      781 gatgaatctt gtacctgatt caaaacaatg ggatggttcg gtcgcatgca tcggtgaaac
      841 cactgctaca gctgcaaaaa gaatgggttt gagaaatgta tactatccat cgagcccagg
      901 tcttcagggt tgggttgaca gcatcatcga tgctttaagc gcccacaagc aggttcaaaa
      961 ggtgtaaaaa ctatcagcag ttccattttt cagatttttg cggttgatgc ccgaagaatc
     1021 ttgtaaaatt tgctagtgta aatttagcga ccagaagagt attgattttg ttaccactta
     1081 tgcaatatat ggaggctgta aaggattaga gaccaagaca tgcttcctga atttgtatat
     1141 gtcctttgat gcttaaaatc tgttattgag gttacttgta acatagaata atacttgctg
     1201 taacttatca atgtataatg agaattcttc atttc
//
LOCUS       XM_071830276            1205 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uroporphyrinogen-III
            synthase, chloroplastic-like (LOC139840051), transcript variant X2,
            mRNA.
ACCESSION   XM_071830276
VERSION     XM_071830276.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1205
                     /gene="LOC139840051"
                     /note="uroporphyrinogen-III synthase, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840051"
     CDS             79..888
                     /gene="LOC139840051"
                     /codon_start=1
                     /product="uroporphyrinogen-III synthase,
                     chloroplastic-like isoform X2"
                     /protein_id="XP_071686377.1"
                     /db_xref="GeneID:139840051"
                     /translation="MNSLLFSLSTTLSPPLQPPTHRRRLQFQPLNIRASSPTTSFSNN
                     RVVVTRERGKNGKLIKALAAQGINFLELPLIQHTHLPDLDRLSALLTATTFDWIIITS
                     PEAALVFLDAWRAAGSPSVKVAVVGAGTASVFNETTNSSKRFIDVAFVPSKATGKVLA
                     SELPKHGNEICSVLYPASAKASQDIEEGLSKRGFQVTRLNTYTTESVQHVDQMIFEQA
                     LSASVVAVASPSAIRAWMNLVPDSKQWDGSVACIGETTATAAKRMGLRNLG"
     misc_feature    214..879
                     /gene="LOC139840051"
                     /note="Uroporphyrinogen-III synthase (HemD) catalyzes the
                     asymmetrical cyclization of tetrapyrrole (linear) to
                     uroporphyrinogen-III, the fourth step in the biosynthesis
                     of heme. This ubiquitous enzyme is present in eukaryotes,
                     bacteria and archaea. Mutations in...; Region: HemD;
                     cd06578"
                     /db_xref="CDD:119440"
     misc_feature    order(226..228,382..390,463..465,610..612,682..684,
                     688..690,757..771)
                     /gene="LOC139840051"
                     /note="active site"
                     /db_xref="CDD:119440"
     polyA_site      1205
                     /gene="LOC139840051"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaagttatca aacaggtgtt aggctaaaat caaagtcaaa ccaacacatt ctccaccacc
       61 gttcaacgtt tgaccgccat gaattcactt ctattttctc tctccaccac tctttctccg
      121 ccgctacaac ctccgactca ccgccggcga cttcaatttc aaccgttgaa cataagagct
      181 tcttctccga cgacgtcgtt ttcgaataat cgagttgttg ttacgagaga gcgtggtaaa
      241 aatggcaaac tcatcaaagc tcttgcagca caagggatca attttttaga acttcccctg
      301 attcagcata cgcacttgcc tgatctggac agactttcgg ccctattgac tgccactact
      361 tttgattgga tcattataac ttcacccgaa gcggctttgg tctttcttga cgcctggaga
      421 gctgctggat cgccaagtgt caaggtagca gtggttggag ctggtactgc aagcgtattt
      481 aatgaaacta caaattcgtc caagagattc attgatgttg cttttgttcc atcaaaagca
      541 actggcaagg ttcttgcttc cgagctaccc aaacatggga atgaaatatg tagtgtttta
      601 tatccagctt ctgcaaaagc tagtcaggac atagaggaag gtctctccaa acgtggattt
      661 caagtcacgc gtttaaatac ttacaccacg gaaagtgttc aacatgtgga ccaaatgatt
      721 tttgaacaag cactctctgc ttctgttgtc gctgtagctt caccttctgc aattagagca
      781 tggatgaatc ttgtacctga ttcaaaacaa tgggatggtt cggtcgcatg catcggtgaa
      841 accactgcta cagctgcaaa aagaatgggt ttgagaaatt tgggttgaca gcatcatcga
      901 tgctttaagc gcccacaagc aggttcaaaa ggtgtaaaaa ctatcagcag ttccattttt
      961 cagatttttg cggttgatgc ccgaagaatc ttgtaaaatt tgctagtgta aatttagcga
     1021 ccagaagagt attgattttg ttaccactta tgcaatatat ggaggctgta aaggattaga
     1081 gaccaagaca tgcttcctga atttgtatat gtcctttgat gcttaaaatc tgttattgag
     1141 gttacttgta acatagaata atacttgctg taacttatca atgtataatg agaattcttc
     1201 atttc
//
LOCUS       XM_071830277            1303 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides hydroxyacylglutathione
            hydrolase 2, mitochondrial-like (LOC139840052), mRNA.
ACCESSION   XM_071830277
VERSION     XM_071830277.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1303
                     /gene="LOC139840052"
                     /note="hydroxyacylglutathione hydrolase 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139840052"
     CDS             83..1075
                     /gene="LOC139840052"
                     /codon_start=1
                     /product="hydroxyacylglutathione hydrolase 2,
                     mitochondrial-like"
                     /protein_id="XP_071686378.1"
                     /db_xref="GeneID:139840052"
                     /translation="MQMLCRSFLPSAVSALPPTEARRMVRALPGIRQLSLRKNLMYGF
                     MQLFSFPFKTLRGVSRSLGVSHLCSISNMSSSLQIELVPCLKDNYAYLLHDLDTGTVG
                     VVDPSESSPIIEVLSRNNRNLNYVLNTHHHYDHTGGNVDLKARYGAKVIGSNIDKERI
                     PGIDISLNDGDTWMFAGHEVHVIATPGHTKGHISFYFPASGVIFTGDTLFSLSCGKLF
                     EGTPEQMYTSLEKLLSLPEDTSIYCGHEYTLSNSKFALSIEPGNEELKSYAATVANLR
                     KKHLPTVPTTLKKEKLCNPFLRTSSQEIRRSLNIPANASDAEALGVIRQAKDNF"
     misc_feature    83..1072
                     /gene="LOC139840052"
                     /note="hydroxyacylglutathione hydrolase; Region: PLN02398"
                     /db_xref="CDD:215223"
     polyA_site      1303
                     /gene="LOC139840052"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatcaaaata cattatattt ctctctcttc ttgttgttag tgtattgctt tcattacaaa
       61 aagcaaaatt cgcacaataa aaatgcaaat gctttgtaga tcattcctac cttctgccgt
      121 ctctgcactc cctcctactg aggcgagaag gatggtccgt gcattgccag gtataagaca
      181 actcagcctt cgaaagaatc ttatgtacgg gtttatgcag ttgttttcgt ttccgttcaa
      241 aaccttgcga ggagtcagtc gatctcttgg tgtttctcat ttgtgtagca tttctaatat
      301 gtcttcatca ttgcaaatag aattggtacc atgtctcaag gacaattatg catatctttt
      361 gcatgattta gatactggga ctgttggagt ggttgatccg tctgagtctt caccgataat
      421 agaggttttg agtaggaaca atcgaaatct gaattacgtc ttgaatactc atcatcatta
      481 tgatcacaca ggtggtaatg tggatttgaa agcaagatat ggggcaaagg taattggatc
      541 aaatatagac aaggaaagaa ttcccggcat tgatatcagc ttgaatgatg gggacacgtg
      601 gatgtttgca gggcatgagg tgcatgttat tgcaaccccg ggtcacacta aaggacatat
      661 cagcttttat tttccggcat ctggggtcat tttcactgga gacactttat tcagcttatc
      721 atgtggcaaa ctattcgaag gaacacctga acagatgtat acgtcccttg agaagttatt
      781 atcgttgcca gaagacacat ctatatattg tggtcatgaa tatacattga gtaattcaaa
      841 gtttgcacta tccattgaac ctggaaatga agaactaaag tcatatgccg caactgtagc
      901 caatcttcgg aaaaagcact tgcctacggt tccaaccacc ttaaagaagg aaaagttatg
      961 caatcctttt ctgcgtactt caagtcaaga aatacgtcgt tcgttaaata ttccagccaa
     1021 tgcgagtgat gcagaggcat tgggtgtgat ccgacaagcc aaggataact tttaaatatt
     1081 ttttgtatac cttttgctcc tgtcatgcac ataagattta ggtctagcat cttggaagat
     1141 tgttttagca actatacgca gtgttggagt ttcacaaaat taagaatgaa tgatcacttg
     1201 gtccttgtat ctgtgttcaa tcttcggtgc agaatatttc ccttgatgtc acatgcataa
     1261 ccatttgacc agcctataat ttcataattc ctggttttaa gca
//
LOCUS       XM_071830278             691 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL23 (LOC139840053), mRNA.
ACCESSION   XM_071830278
VERSION     XM_071830278.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..691
                     /gene="LOC139840053"
                     /note="large ribosomal subunit protein uL23; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139840053"
     CDS             69..530
                     /gene="LOC139840053"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL23"
                     /protein_id="XP_071686379.1"
                     /db_xref="GeneID:139840053"
                     /translation="MAPKGDVTKKGDAKAQALKTAKAVKTGSTFKKKAKKIRTKVTFH
                     RPKTLKTDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRAD
                     KKKIKAAVKKMYDIQTKKVNTLIRPDGTKKAYVKLTPDYDALDVANKIGII"
     misc_feature    102..527
                     /gene="LOC139840053"
                     /note="60S ribosomal protein L23a; Provisional; Region:
                     PTZ00191"
                     /db_xref="CDD:185507"
     polyA_site      691
                     /gene="LOC139840053"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaccctagt ttgcagccgt ctcatttctt attttgaagc tgatttattg aagtaggatt
       61 gaataccaat ggcgcctaaa ggtgatgtaa cgaagaaagg agacgctaag gctcaggctt
      121 tgaagacagc aaaggctgtg aagacaggtt cgaccttcaa aaagaaggct aagaagatcc
      181 gcacgaaggt cacatttcac cgaccaaaga cactgaagac cgatagaaat cctaagtacc
      241 cacgtatcag tgccccacca agaaacaagc ttgaccacta tcaaatattg aaatacccgt
      301 tgaccacaga atctgcaatg aagaagatcg aggataacaa cactctggtt ttcattgttg
      361 acattcgtgc tgacaagaag aagatcaaag ctgcagttaa aaagatgtat gacatacaga
      421 caaagaaagt caacactttg atcagacctg acggaacgaa gaaggcttat gtaaagctta
      481 ccccagacta tgatgctttg gatgttgcta acaagattgg aataatctaa taaggttaat
      541 gtcggttcag cagaatggtg aaatgtatgc tcgctgtggt gattttatta gttttatttt
      601 ctcaaatagt acttgcaagt ttattgagat tattatacat ttgaatgcaa tcttgttaat
      661 gaagcgtact tcaacagctt cagttttgtt a
//
LOCUS       XM_071830279            2417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase-like protein CCR4 (LOC139840054), mRNA.
ACCESSION   XM_071830279
VERSION     XM_071830279.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2417
                     /gene="LOC139840054"
                     /note="serine/threonine-protein kinase-like protein CCR4;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139840054"
     CDS             75..2327
                     /gene="LOC139840054"
                     /codon_start=1
                     /product="serine/threonine-protein kinase-like protein
                     CCR4"
                     /protein_id="XP_071686380.1"
                     /db_xref="GeneID:139840054"
                     /translation="MTHSLIFLLFFLLIIPSSISTLSTVSITHITSSNQTLICALTNS
                     QTNNLNCTTPFDQSLPSTRFPYVGIVGGTNFLCALSSPFNSSSKTFLVCWRFLANGSP
                     VYKRIYLGSPLKDIDSDDQRVCGIVTVTNQLLCWQWDEFNHNSILNQSQFNSSVAIGQ
                     NFVCGLSEFGRIKCNNFNIMNGSQNGNYSVVSAGYNRVCAINANGGLECWGDVMTSKP
                     SGVFKSVAIGDNRYCVIRINGTVFCWGESGFGLPRNLEQVYFEGLQVNRDVFCGITTS
                     NYSIYCWGNEFFNSNSSVFANVVPGLCTTSCECGTIVNYATFCDGDLMICRPCVYTQA
                     PPELVPPPPSPATRNGGWSGKMVAFAVVGSVGCLSFVFIFVYLFLRFCKSVEGSRVHD
                     SGPMESIQFASGIRASNRILVKKLSHLISMGTGNHLEEFDLQTIIDATDNFSDERRIG
                     VGSFGSVYHGLLTNGRKVAIKRAEITSSPSGRAGTNKRQEDTNNAFLSELEFLSRVNH
                     KNLVQLLGYCEENNELVLVYEFMENGSLHDHLHNVFSSHIMSWPARIKVALDAARGLE
                     YLHVYADPPIIHRDIKSSNILLDGEWTGKVSDFGLSLLGPPDNGSHLSLGAAGTVGYM
                     DPEYYKYGQLTAKSDVYSFGVMLLELLSGHRAIQKNETGERRNVVDSVVPYIENDVIY
                     RILDRKVPPPTAFEIEAVKNVGYLAADCVTLLGKDRPTMSELVICLERALSDCLTIPS
                     FGHSSNGSSS"
     misc_feature    279..980
                     /gene="LOC139840054"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; Region:
                     ATS1; COG5184"
                     /db_xref="CDD:444065"
     misc_feature    1419..2264
                     /gene="LOC139840054"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1419..1433,1443..1445,1479..1481,1485..1487,
                     1608..1610,1656..1667,1677..1679,1683..1685,1812..1814,
                     1818..1820,1824..1829,1833..1835,1866..1868,1875..1877,
                     1929..1940)
                     /gene="LOC139840054"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1419..1433,1443..1445,1479..1481,1485..1487,
                     1608..1610,1656..1667,1677..1679,1812..1814,1818..1820,
                     1824..1829,1833..1835,1866..1868)
                     /gene="LOC139840054"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1431..1433,1677..1679,1683..1685,1812..1814,
                     1818..1820,1824..1826,1875..1877,1929..1940)
                     /gene="LOC139840054"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1863..1886,1917..1940)
                     /gene="LOC139840054"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 cacacacaca cacacacaca cacacacaca ctaacaatta cagtaattaa caccaccatg
       61 aaaccaccat ttccatgact cattccttaa tctttctcct cttcttctta ctcataattc
      121 catcttcaat atccacactt tcaactgtat caattaccca cataaccagc tcaaaccaaa
      181 cactcatctg tgcattaacc aactctcaaa ccaacaacct caattgcacg acaccgtttg
      241 atcaatcact cccctcaact cggtttccgt acgttggaat cgttggtggg accaactttt
      301 tatgtgcatt aagctcgcct ttcaattcat catctaaaac gtttcttgtt tgttggcggt
      361 ttttggctaa cggaagtccg gtttacaagc gaatttacct cggttcgcct cttaaagaca
      421 tcgattcgga cgatcaacgt gtttgtggga tcgttactgt tactaatcag cttttgtgtt
      481 ggcaatggga tgaatttaac cataattcga tacttaatca atctcagttt aattctagcg
      541 ttgcgattgg acaaaatttt gtttgtgggt tgtccgaatt tggacgaatt aaatgtaata
      601 attttaatat tatgaatggg tcacaaaatg ggaactatag tgtagtatcc gcaggttata
      661 atcgagtttg cgcgattaat gcgaatggtg gtttggagtg ttggggagac gtgatgacgt
      721 cgaaaccgag tggtgtgttt aaatcggttg cgattggaga taatcgatat tgcgtgatta
      781 ggattaacgg aacagtgttt tgttggggtg aaagtgggtt tggtttgcca cgtaatttag
      841 agcaggttta ttttgaggga ttgcaagtga atcgcgatgt tttttgtgga atcacaacgt
      901 cgaattattc gatttattgt tgggggaatg agttttttaa ttcgaattcg agtgtttttg
      961 ctaatgttgt gccaggttta tgtactacta gttgtgagtg tggtacaatt gtaaattatg
     1021 caacattttg tgatggggat ttgatgattt gtaggccttg tgtttatact caagctccac
     1081 cggaattagt tccaccgccg ccgtctccgg caacacggaa tggtggttgg agtggcaaaa
     1141 tggtggcatt cgcagtggtg gggtccgtgg gttgcttatc attcgttttc attttcgtgt
     1201 atttattttt aagattctgt aaatcggttg aaggtagccg agttcatgat tcgggaccga
     1261 tggaaagcat ccaattcgct tctggaattc gagcttcgaa tcgtatactt gtaaagaaac
     1321 taagccattt gatcagtatg ggaactggga atcatttgga agaattcgat ttacagacga
     1381 ttattgacgc gactgataat ttctccgatg aacgtcgaat aggggtagga agtttcggtt
     1441 cagtttacca tggtttatta accaatggtc gaaaagtggc gattaaacgg gctgagataa
     1501 cgagctcccc atcgggccgg gctggaacaa acaaacgcca agaagataca aacaacgcgt
     1561 ttttaagcga gctcgagttt ctttcgcgtg ttaatcacaa aaatttggtt cagttattag
     1621 gctactgtga agaaaacaat gaacttgttt tagtgtatga gtttatggaa aatggtagcc
     1681 ttcatgacca cctacacaat gtgtttagct cgcatataat gtcgtggccc gcacgaatta
     1741 aggtggcgct tgacgcggct agagggcttg agtaccttca tgtatatgct gatccaccaa
     1801 ttattcatcg cgacattaag tcatcaaaca tattgcttga tggtgaatgg acaggaaaag
     1861 tatcagattt cgggctatcg ttattgggcc caccggacaa tgggtcacac ctttcgttag
     1921 gtgctgcggg cacggttggt tacatggacc cagagtacta taagtacgga cagttaacag
     1981 caaagagtga tgtttatagt tttggagtta tgttactaga attattatcg gggcaccgag
     2041 caattcaaaa gaacgagacg ggcgagagaa ggaatgtggt ggattcggtt gtgccataca
     2101 tcgaaaatga tgttatatac cggattttag accgaaaagt tcctcccccg accgcttttg
     2161 aaatcgaggc agtgaagaat gttggatact tagctgccga ttgtgtgaca ttgctaggta
     2221 aagatcgacc aacaatgagt gaactcgtta tatgcttgga aagggcgtta tcggattgtt
     2281 tgacgatccc gtctttcggt catagctcga atggctcttc gagctaactt tcatttgata
     2341 gatagattgt agcttatgtt catacattgt tgatataacc attttatttt atttttaaat
     2401 attatttaat ttgttat
//
LOCUS       XM_071830280            1296 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides syntaxin-22-like
            (LOC139840055), mRNA.
ACCESSION   XM_071830280
VERSION     XM_071830280.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1296
                     /gene="LOC139840055"
                     /note="syntaxin-22-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840055"
     CDS             186..1004
                     /gene="LOC139840055"
                     /codon_start=1
                     /product="syntaxin-22-like"
                     /protein_id="XP_071686381.1"
                     /db_xref="GeneID:139840055"
                     /translation="MSFQDIEAGGRPLNSRRLKQQQDPTQAIASGIFQINTAVSTFQR
                     LVNSLGTPKDTPELRDKLHKTRLHIGQLVKDTSDKLKQASEIDHRAEVSASKKITDAK
                     LAKDFQAVLKEYQKAQRLSAERETAYSPSIPQAIHSSRNEGSEPDASSGGFPEHRALL
                     VESKREELVLLDNEIAFNEAIIEERDQGIQEIQNQIGEVNEIFKDLAVLVHEQGTMID
                     DIGSNIENSNAATAQAKSHLVKASKTQRSNSSMTCLLLVILGIVLLIVIIVLVA"
     misc_feature    267..569
                     /gene="LOC139840055"
                     /note="Syntaxin-like protein; Region: Syntaxin_2;
                     pfam14523"
                     /db_xref="CDD:464199"
     misc_feature    729..905
                     /gene="LOC139840055"
                     /note="SNARE motif, subgroup Qa; Region: SNARE_Qa;
                     cd15840"
                     /db_xref="CDD:277193"
     misc_feature    order(732..734,738..743,747..764,768..776,780..785,
                     789..797,801..806,810..818,822..827,831..848,852..869,
                     873..890,894..902)
                     /gene="LOC139840055"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277193"
     misc_feature    822..824
                     /gene="LOC139840055"
                     /note="zero layer; other site"
                     /db_xref="CDD:277193"
ORIGIN      
        1 tttacttttc ccccctcacc tgtaaatcaa tcatcacgtc cctttccaat tccctacata
       61 gatcgttgcc ctaattccca ccatttatgt actaacccta actctgattg cctttatgat
      121 cacaattttg ctttctcgat ttcactattc aattcaatta actcaaatca taaatcatca
      181 ttaaaatgag ttttcaagat attgaagccg gtggtcggcc gttgaattca cgacggttga
      241 aacaacagca agacccaacg caagcaatag cttctggaat attccagatc aatacagctg
      301 tctctacctt tcagagactt gttaattccc ttggtacccc taaagacacc cctgagcttc
      361 gtgataaact gcacaagaca agactacata ttgggcagtt ggtgaaggac acatccgata
      421 aactcaagca agctagtgaa attgatcatc gtgctgaagt tagcgctagc aaaaagatta
      481 cagatgctaa acttgcaaaa gattttcaag cagttttaaa agagtatcag aaagcacaac
      541 ggctttcagc agaaagggag acagcttact ctccttctat tcctcaagct attcattcat
      601 cacgtaatga agggagtgaa ccggatgcta gctctggcgg atttccagaa catcgcgctc
      661 ttcttgtcga atctaaaaga gaggaattgg tactgttgga caatgagatt gcgtttaacg
      721 aggcgattat tgaggaaaga gatcagggaa tacaagaaat ccagaaccaa attggtgagg
      781 ttaatgaaat attcaaagat cttgctgttt tggttcatga gcaaggaact atgatcgatg
      841 acattggttc gaatattgaa aactctaatg ctgcaactgc acaagcaaag tcacatcttg
      901 taaaagcatc aaagactcaa agatcaaact cttccatgac ttgcttgctt ttggtgatct
      961 tagggattgt gcttctcatt gttatcatag tacttgtggc ttgactcggg tatttattaa
     1021 actggcaaat cagagcttgt ttagcgaatg gaagtttcaa cgtattctcg aagattcatt
     1081 catcatatct gtgtttgtac aaatttacat catggccgtg tgattgcatg ttttgcaagt
     1141 gttttttcta ctaaattgtt tttttttccg ctgttcattc tggagtattg gtttgtttta
     1201 tgggttctag ctaatagatg aatcctccag cctttttggt agtgtgtgtg tgagagctga
     1261 aaaattgatt cttgccaatg tttttggaaa ataaat
//
LOCUS       XM_071830281             617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein uS17-like (LOC139840056), mRNA.
ACCESSION   XM_071830281
VERSION     XM_071830281.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..617
                     /gene="LOC139840056"
                     /note="small ribosomal subunit protein uS17-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139840056"
     CDS             74..553
                     /gene="LOC139840056"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS17-like"
                     /protein_id="XP_071686382.1"
                     /db_xref="GeneID:139840056"
                     /translation="MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRYWKNIGLGFK
                     TPREAIDGTYIDKKCPFTGDVSIRGRILAGTCHSAKMMRTIIVRRDYLHYVKKYQRYE
                     KRHSNIPAHISPCFRVKEGDHVTVGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGI"
     misc_feature    74..541
                     /gene="LOC139840056"
                     /note="40S ribosomal protein S11; Provisional; Region:
                     PTZ00241"
                     /db_xref="CDD:240326"
ORIGIN      
        1 cctagggttt atttctgcgc atttctatac ctcctaccgc cgttgctgca aagcttctaa
       61 tcattcacaa aatatggctg aacagaccga aaaggcgttt ttgaagcaac ctaaagtgtt
      121 tctctgctcg aagaaaagtg gtaaaggaaa gagacctgga aagggtggaa acagatactg
      181 gaagaatatt ggtctcggat ttaagactcc cagagaagcc attgatggaa cctacattga
      241 caaaaagtgt cccttcactg gtgatgtatc cattaggggc cgtattcttg ctggtacatg
      301 ccatagtgcc aagatgatga ggactattat tgttcgaagg gattatcttc attatgtgaa
      361 gaagtatcaa aggtatgaga agaggcactc aaacattcct gctcacatct caccgtgttt
      421 ccgtgtgaag gaaggtgacc atgtcaccgt tggtcaatgc agaccattgt cgaagacagt
      481 gaggttcaac gtcttgaagg tgattccagc aggatcttca ggcggtggga aaaaagcatt
      541 tacagggata taaacgaagc aagccttcaa catcattact tttgctttga tgatgtaaaa
      601 gtttttgaga acaaaac
//
LOCUS       XR_011757204            1839 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X1, ncRNA.
ACCESSION   XR_011757204
VERSION     XR_011757204.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1839
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1839
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatgg gtttaaagct attgacttca
      241 aactgttaat tgttggcgat tgccgttgtt ttacctgcta ttgctgctgt tttcgttaac
      301 tcgactatcc cgtttgaatt tggtatgtca ctgaattttg catactaact gtttataaat
      361 ttataactgt tatgcttaat cgggtggaat tagggttatg gttgttgatt tgttatgttt
      421 aactatgaag tgatgtaaaa atattatcaa aattttaatt attaagtgat gtaaatttta
      481 caccaaacga taatattttg tatgtttaat ttagtacaac tgacataaaa aatgggttta
      541 tggacgaatt tacaattata attagacgaa attattcttg atgtgcagtt cactgagctt
      601 cccattttac ttatcacttc atttttgaaa taggtattgt tcttgatgtg cagttcaagt
      661 actgcattta tcgtttgcaa gaccaaagat ttagtcacaa ctcataaaaa aaagacacag
      721 taacaactca taaaacgttt gcagtcagtt gcatatcact ttatgtcgat attctgtttc
      781 ttaaatcgtg tcaccaacat tttggagcta atgttatgtg tactaaatgt ggtcaactaa
      841 gtatacattt agtataaatt agctctatac atttagtata ctaactctaa tcattggtcc
      901 tcttgggcat tcccacttac atccgtcccc tttctctcga taaatattgt taccgcattt
      961 gattttgttt gataatagtt ggagtatttt tattcaagaa tgattatatt atatactaga
     1021 ggtttagcag tttaaagtta aacagaaaag caaattctac tcaatacttt gcaacttcgg
     1081 accaacagtg aagttcgaga ttcattagtt gcttataact acaacacctt catagatcca
     1141 acaggatacc aaggtcaagt agatatccct ggtatcatca agagaatcga acaccaaaaa
     1201 acaattctac tgttccgaaa cagctcatcc acaaggacac cactagaatt tatcattgat
     1261 cacacattcg atgtaacaac agccgcaaca ccaacggcag acacactggc cagcaacaca
     1321 aaaggcaaca caaaatccat gtaaagacca caaagctgca acagttgctc ctactacttt
     1381 gtttcagcga cctatgctat tgctatgtca agctattaac tataagtgtt catcattgcc
     1441 tgaaacctcc atcgcccttt atccctaagg tatataattg tgttcttttc tgcttaatca
     1501 gttacctatt tctcacttcc aaattttgtg aaattagtta ttgtagtaga tgtttaattt
     1561 gtcgttatag taggaaccta aatgctatgc tagatgaata tattattgga ctatatggtt
     1621 tatttgtgat agttggagac gctattggta catctctcac ttggccttgt ctgtttatat
     1681 cggtggtacg tggagattga tagagataga tgttgacata tgacgttatg cgctgcttgt
     1741 cattaatttt acgttcttgt taaatgttat tcgaagtctt tatatattgg gattaattgt
     1801 gaatttttat gtttagtttt gtttgtgtta tgagaataa
//
LOCUS       XR_011757205            1844 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X2, ncRNA.
ACCESSION   XR_011757205
VERSION     XR_011757205.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1844
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1844
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatga ttagggttta aagctattga
      241 cttcaaactg ttaattgttg gcgattgccg ttgttttacc tgctattgct gctgttttcg
      301 ttaactcgac tatcccgttt gaatttggta tgtcactgaa ttttgcatac taactgttta
      361 taaatttata actgttatgc ttaatcgggt ggaattaggg ttatggttgt tgatttgtta
      421 tgtttaacta tgaagtgatg taaaaatatt atcaaaattt taattattaa gtgatgtaaa
      481 ttttacacca aacgataata ttttgtatgt ttaatttagt acaactgaca taaaaaatgg
      541 gtttatggac gaatttacaa ttataattag acgaaattat tcttgatgtg cagttcactg
      601 agcttcccat tttacttatc acttcatttt tgaaataggt attgttcttg atgtgcagtt
      661 caagtactgc atttatcgtt tgcaagacca aagatttagt cacaactcat aaaaaaaaga
      721 cacagtaaca actcataaaa cgtttgcagt cagttgcata tcactttatg tcgatattct
      781 gtttcttaaa tcgtgtcacc aacattttgg agctaatgtt atgtgtacta aatgtggtca
      841 actaagtata catttagtat aaattagctc tatacattta gtatactaac tctaatcatt
      901 ggtcctcttg ggcattccca cttacatccg tcccctttct ctcgataaat attgttaccg
      961 catttgattt tgtttgataa tagttggagt atttttattc aagaatgatt atattatata
     1021 ctagaggttt agcagtttaa agttaaacag aaaagcaaat tctactcaat actttgcaac
     1081 ttcggaccaa cagtgaagtt cgagattcat tagttgctta taactacaac accttcatag
     1141 atccaacagg ataccaaggt caagtagata tccctggtat catcaagaga atcgaacacc
     1201 aaaaaacaat tctactgttc cgaaacagct catccacaag gacaccacta gaatttatca
     1261 ttgatcacac attcgatgta acaacagccg caacaccaac ggcagacaca ctggccagca
     1321 acacaaaagg caacacaaaa tccatgtaaa gaccacaaag ctgcaacagt tgctcctact
     1381 actttgtttc agcgacctat gctattgcta tgtcaagcta ttaactataa gtgttcatca
     1441 ttgcctgaaa cctccatcgc cctttatccc taaggtatat aattgtgttc ttttctgctt
     1501 aatcagttac ctatttctca cttccaaatt ttgtgaaatt agttattgta gtagatgttt
     1561 aatttgtcgt tatagtagga acctaaatgc tatgctagat gaatatatta ttggactata
     1621 tggtttattt gtgatagttg gagacgctat tggtacatct ctcacttggc cttgtctgtt
     1681 tatatcggtg gtacgtggag attgatagag atagatgttg acatatgacg ttatgcgctg
     1741 cttgtcatta attttacgtt cttgttaaat gttattcgaa gtctttatat attgggatta
     1801 attgtgaatt tttatgttta gttttgtttg tgttatgaga ataa
//
LOCUS       XR_011757206            1735 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X3, ncRNA.
ACCESSION   XR_011757206
VERSION     XR_011757206.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1735
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1735
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatgg gtttaaagct attgacttca
      241 aactgttaat tgttggcgat tgccgttgtt ttacctgcta ttgctgctgt tttcgttaac
      301 tcgactatcc cgtttgaatt tggtatgtca ctgaattttg catactaact gtttataaat
      361 ttataactgt tatgcttaat cgggtggaat tagggttatg gttgttgatt tgttatgttt
      421 aactatgaag tgatgtaaaa atattatcaa aattttaatt attaagtgat gtaaatttta
      481 caccaaacga taatattttg tatgtttaat ttagtacaac tgacataaaa aatgggttta
      541 tggacgaatt tacaattata attagacgaa attattcttg atgtgcagtt cactgagctt
      601 cccattttac ttatcacttc atttttgaaa taggtattgt tcttgatgtg cagttcaagt
      661 actgcattta tcgtttgcaa gaccaaagat ttagtcacaa ctcataaaaa aaagacacag
      721 taacaactca taaaacgttt gcagtcagtt gcatatcact ttatgtcgat attctgtttc
      781 ttaaatcgtg tcaccaacat tttggagcta atgttatgtg tactaaatgt ggtcaactaa
      841 gtatacattt agtataaatt agctctatac atttagtata ctaactctaa tcattggtcc
      901 tcttgggcat tcccacttac atccgtcccc tttctctcga taaatattgt taccgcattt
      961 gattttgttt gataatagtt ggagtatttt tattcaagaa tgattatatt atatactaga
     1021 ggtttagcag tttaaagtta aacagaaaag caaattctac tcaatacttt gcaacttcgg
     1081 accaacagtg aagttcgaga ttcattagtt gcttataact acaacacctt catagatcca
     1141 acaggatacc aaggtcaagt agatatccct ggtatcatca agagaatcga acaccaaaaa
     1201 acaattctac tgttccgaaa cagctcatcc acaaggacac cactagaatt tatcattgat
     1261 cacacattcg atgtaacaac agccgcaaca ccaacggcag acacactggc cagcaacaca
     1321 aaaggcaaca caaaatccat gtaaagacca caaagctgca acagttgctc ctactacttt
     1381 gtttcagcga cctatgctat tgctatgtca agctattaac tataagtgtt catcattgcc
     1441 tgaaacctcc atcgcccttt atccctaagg aacctaaatg ctatgctaga tgaatatatt
     1501 attggactat atggtttatt tgtgatagtt ggagacgcta ttggtacatc tctcacttgg
     1561 ccttgtctgt ttatatcggt ggtacgtgga gattgataga gatagatgtt gacatatgac
     1621 gttatgcgct gcttgtcatt aattttacgt tcttgttaaa tgttattcga agtctttata
     1681 tattgggatt aattgtgaat ttttatgttt agttttgttt gtgttatgag aataa
//
LOCUS       XR_011757207            1738 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X4, ncRNA.
ACCESSION   XR_011757207
VERSION     XR_011757207.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1738
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1738
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatgg gtttaaagct attgacttca
      241 aactgttaat tgttggcgat tgccgttgtt ttacctgcta ttgctgctgt tttcgttaac
      301 tcgactatcc cgtttgaatt tggtatgtca ctgaattttg catactaact gtttataaat
      361 ttataactgt tatgcttaat cgggtggaat tagggttatg gttgttgatt tgttatgttt
      421 aactatgaag tgatgtaaaa atattatcaa aattttaatt attaagtgat gtaaatttta
      481 caccaaacga taatattttg tatgtttaat ttagtacaac tgacataaaa aatgggttta
      541 tggacgaatt tacaattata attagacgaa attattcttg atgtgcagtt cactgagctt
      601 cccattttac ttatcacttc atttttgaaa taggtattgt tcttgatgtg cagttcaagt
      661 actgcattta tcgtttgcaa gaccaaagat ttagtcacaa ctcataaaaa aaagacacag
      721 taacaactca taaaacgttt gcagtcagtt gcatatcact ttatgtcgat attctgtttc
      781 ttaaatcgtg tcaccaacat tttggagcta atgttatgtg tactaaatgt ggtcaactaa
      841 gtatacattt agtataaatt agctctatac atttagtata ctaactctaa tcattggtcc
      901 tcttgggcat tcccacttac atccgtcccc tttctctcga taaatattgt taccgcattt
      961 gattttgttt gataatagtt ggagtatttt tattcaagaa tgattatatt atatactaga
     1021 ggtttagcag tttaaagtta aacagaaaag caaattctac tcaatacttt gcaacttcgg
     1081 accaacagtg aagttcgaga ttcattagtt gcttataact acaacacctt catagatcca
     1141 acaggatacc aaggtcaagt agatatccct ggtatcatca agagaatcga acaccaaaaa
     1201 acaattctac tgttccgaaa cagctcatcc acaaggacac cactagaatt tatcattgat
     1261 cacacattcg atgtaacaac agccgcaaca ccaacggcag acacactggc cagcaacaca
     1321 aaaggcaaca caaaatccat gtaaagacca caaagctgca acagttgctc ctactacttt
     1381 gtttcagcga cctatgctat tgctatgtca agctattaac tataagtgtt catcattgcc
     1441 tgaaacctcc atcgcccttt atccctaagt aggaacctaa atgctatgct agatgaatat
     1501 attattggac tatatggttt atttgtgata gttggagacg ctattggtac atctctcact
     1561 tggccttgtc tgtttatatc ggtggtacgt ggagattgat agagatagat gttgacatat
     1621 gacgttatgc gctgcttgtc attaatttta cgttcttgtt aaatgttatt cgaagtcttt
     1681 atatattggg attaattgtg aatttttatg tttagttttg tttgtgttat gagaataa
//
LOCUS       XR_011757208            1676 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X5, ncRNA.
ACCESSION   XR_011757208
VERSION     XR_011757208.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1676
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1676
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatgg gtttaaagct attgacttca
      241 aactgttaat tgttggcgat tgccgttgtt ttacctgcta ttgctgctgt tttcgttaac
      301 tcgactatcc cgtttgaatt tggtatgtca ctgaattttg catactaact gtttataaat
      361 ttataactgt tatgcttaat cgggtggaat tagggttatg gttgttgatt tgttatgttt
      421 aactatgaag tgatgtaaaa atattatcaa aattttaatt attaagtgat gtaaatttta
      481 caccaaacga taatattttg tatgtttaat ttagtacaac tgacataaaa aatgggttta
      541 tggacgaatt tacaattata attagacgaa attattcttg atgtgcagtt cactgagctt
      601 cccattttac ttatcacttc atttttgaaa taggtattgt tcttgatgtg cagttcaagt
      661 actgcattta tcgtttgcaa gaccaaagat ttagtcacaa ctcataaaaa aaagacacag
      721 taacaactca taaaacgttt gcagtcagtt gcatatcact ttatgtcgat attctgtttc
      781 ttaaatcgtg tcaccaacat tttggagcta atgttatgtg tactaaatgt ggtcaactaa
      841 gtatacattt agtataaatt agctctatac atttagtata ctaactctaa tcattggtcc
      901 tcttgggcat tcccacttac atccgtcccc tttctctcga taaatattgt taccgcattt
      961 gattttgttt gataatagtt ggagtatttt tattcaagaa tgattatatt atatactaga
     1021 ggtttagcag tttaaagtta aacagaaaag caaattctac tcaatacttt gcaacttcgg
     1081 accaacagtg aagttcgaga ttcattagtt gcttataact acaacacctt catagatcca
     1141 acaggatacc aaggtcaagt agatatccct ggtatcatca agagaatcga acaccaaaaa
     1201 acaattctac tgttccgaaa cagctcatcc acaaggacac cactagaatt tatcattgat
     1261 cacacattcg atgtaacaac agccgcaaca ccaacggcag acacactggc cagcaacaca
     1321 aaaggcaaca caaaatccat gtaaagacca caaagctgca acagttgctc ctactacttt
     1381 gtttcagcga cctatgctat tgctatgtca agctattaac tataagtgtt catcattgcc
     1441 tgaaacctcc atcgcccttt atccctaagt tggagacgct attggtacat ctctcacttg
     1501 gccttgtctg tttatatcgg tggtacgtgg agattgatag agatagatgt tgacatatga
     1561 cgttatgcgc tgcttgtcat taattttacg ttcttgttaa atgttattcg aagtctttat
     1621 atattgggat taattgtgaa tttttatgtt tagttttgtt tgtgttatga gaataa
//
LOCUS       XR_011757209            1183 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X6, ncRNA.
ACCESSION   XR_011757209
VERSION     XR_011757209.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1183
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1183
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatgg gtttaaagct attgacttca
      241 aactgttaat tgttggcgat tgccgttgtt ttacctgcta ttgctgctgt tttcgttaac
      301 tcgactatcc cgtttgaatt tgttggagta tttttattca agaatgatta tattatatac
      361 tagaggttta gcagtttaaa gttaaacaga aaagcaaatt ctactcaata ctttgcaact
      421 tcggaccaac agtgaagttc gagattcatt agttgcttat aactacaaca ccttcataga
      481 tccaacagga taccaaggtc aagtagatat ccctggtatc atcaagagaa tcgaacacca
      541 aaaaacaatt ctactgttcc gaaacagctc atccacaagg acaccactag aatttatcat
      601 tgatcacaca ttcgatgtaa caacagccgc aacaccaacg gcagacacac tggccagcaa
      661 cacaaaaggc aacacaaaat ccatgtaaag accacaaagc tgcaacagtt gctcctacta
      721 ctttgtttca gcgacctatg ctattgctat gtcaagctat taactataag tgttcatcat
      781 tgcctgaaac ctccatcgcc ctttatccct aaggtatata attgtgttct tttctgctta
      841 atcagttacc tatttctcac ttccaaattt tgtgaaatta gttattgtag tagatgttta
      901 atttgtcgtt atagtaggaa cctaaatgct atgctagatg aatatattat tggactatat
      961 ggtttatttg tgatagttgg agacgctatt ggtacatctc tcacttggcc ttgtctgttt
     1021 atatcggtgg tacgtggaga ttgatagaga tagatgttga catatgacgt tatgcgctgc
     1081 ttgtcattaa ttttacgttc ttgttaaatg ttattcgaag tctttatata ttgggattaa
     1141 ttgtgaattt ttatgtttag ttttgtttgt gttatgagaa taa
//
LOCUS       XR_011757210            1142 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X7, ncRNA.
ACCESSION   XR_011757210
VERSION     XR_011757210.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1142
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1142
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatgg gtttaaagct attgacttca
      241 aactgttaat tgttggcgat tgccgttgtt ttacctgcta ttgctgctgt tttcgttaac
      301 tcgactatcc cgtttgaatt tgaggtttag cagtttaaag ttaaacagaa aagcaaattc
      361 tactcaatac tttgcaactt cggaccaaca gtgaagttcg agattcatta gttgcttata
      421 actacaacac cttcatagat ccaacaggat accaaggtca agtagatatc cctggtatca
      481 tcaagagaat cgaacaccaa aaaacaattc tactgttccg aaacagctca tccacaagga
      541 caccactaga atttatcatt gatcacacat tcgatgtaac aacagccgca acaccaacgg
      601 cagacacact ggccagcaac acaaaaggca acacaaaatc catgtaaaga ccacaaagct
      661 gcaacagttg ctcctactac tttgtttcag cgacctatgc tattgctatg tcaagctatt
      721 aactataagt gttcatcatt gcctgaaacc tccatcgccc tttatcccta aggtatataa
      781 ttgtgttctt ttctgcttaa tcagttacct atttctcact tccaaatttt gtgaaattag
      841 ttattgtagt agatgtttaa tttgtcgtta tagtaggaac ctaaatgcta tgctagatga
      901 atatattatt ggactatatg gtttatttgt gatagttgga gacgctattg gtacatctct
      961 cacttggcct tgtctgttta tatcggtggt acgtggagat tgatagagat agatgttgac
     1021 atatgacgtt atgcgctgct tgtcattaat tttacgttct tgttaaatgt tattcgaagt
     1081 ctttatatat tgggattaat tgtgaatttt tatgtttagt tttgtttgtg ttatgagaat
     1141 aa
//
LOCUS       XR_011757211            1116 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X8, ncRNA.
ACCESSION   XR_011757211
VERSION     XR_011757211.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1116
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatgg gtttaaagct attgacttca
      241 aactgttaat tgttggcgat tgccgttgtt ttacctgcta ttgctgctgt tttcgttaac
      301 tcgactatcc cgtttgaatt tgaaaagcaa attctactca atactttgca acttcggacc
      361 aacagtgaag ttcgagattc attagttgct tataactaca acaccttcat agatccaaca
      421 ggataccaag gtcaagtaga tatccctggt atcatcaaga gaatcgaaca ccaaaaaaca
      481 attctactgt tccgaaacag ctcatccaca aggacaccac tagaatttat cattgatcac
      541 acattcgatg taacaacagc cgcaacacca acggcagaca cactggccag caacacaaaa
      601 ggcaacacaa aatccatgta aagaccacaa agctgcaaca gttgctccta ctactttgtt
      661 tcagcgacct atgctattgc tatgtcaagc tattaactat aagtgttcat cattgcctga
      721 aacctccatc gccctttatc cctaaggtat ataattgtgt tcttttctgc ttaatcagtt
      781 acctatttct cacttccaaa ttttgtgaaa ttagttattg tagtagatgt ttaatttgtc
      841 gttatagtag gaacctaaat gctatgctag atgaatatat tattggacta tatggtttat
      901 ttgtgatagt tggagacgct attggtacat ctctcacttg gccttgtctg tttatatcgg
      961 tggtacgtgg agattgatag agatagatgt tgacatatga cgttatgcgc tgcttgtcat
     1021 taattttacg ttcttgttaa atgttattcg aagtctttat atattgggat taattgtgaa
     1081 tttttatgtt tagttttgtt tgtgttatga gaataa
//
LOCUS       XR_011757212            1824 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840057), transcript variant X9, ncRNA.
ACCESSION   XR_011757212
VERSION     XR_011757212.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1824
                     /gene="LOC139840057"
                     /note="uncharacterized LOC139840057; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840057"
     ncRNA           1..1824
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840057"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139840057"
ORIGIN      
        1 ttccttaatc tatcttcttt ctttatctac ctaaattcac tggtatatag atttctgatc
       61 ctattattca ataatcagat attgaatgtc aatccatcag tatgattatg gttatttcga
      121 ttatttttat acgattattc gatgtttatt ctcccttatc tatttgacct aattccaaaa
      181 atcctttgtt ccgcaattac aatacgatct tcgccgatgg gtttaaagct attgacttca
      241 aactgttaat tgttggcgat tgccgttgtt ttacctgcta ttgctgctgt tttcgttaac
      301 tcgactatcc cgtttgaatt tggtatgtca ctgaattttg catactaact gtttataaat
      361 ttataactgt tatgcttaat cgggtggaat tagggttatg gttgttgatt tgttatgttt
      421 aactatgaag tgatgtaaaa atattatcaa aattttaatt attaagtgat gtaaatttta
      481 caccaaacga taatattttg tatgtttaat ttagtacaac tgacataaaa aatgggttta
      541 tggacgaatt tacaattata attagacgaa attattcttg atgtgcagtt cactgagctt
      601 cccattttac ttatcacttc atttttgaaa taggtattgt tcttgatgtg cagttcaagt
      661 actgcattta tcgtttgcaa gaccaaagat ttagtcacaa ctcataaaaa aaagacacag
      721 taacaactca taaaacgttt gcagtcagtt gcatatcact ttatgtcgat attctgtttc
      781 ttaaatcgtg tcaccaacat tttggagcta atgttatgtg tactaaatgt ggtcaactaa
      841 gtatacattt agtataaatt agctctatac atttagtata ctaactctaa tcattggtcc
      901 tcttgggcat tcccacttac atccgtcccc tttctctcga taaatattgt taccgcattt
      961 gattttgttt gataatagtt ggagtatttt tattcaagaa tgattatatt atatactaga
     1021 ggtttagcag tttaaagtta aacagaaaag caaattctac tcaatacttt gcaacttcgg
     1081 accaacagtg aagttcgaga ttcattagtt gcttataact acaacacctt catagatcca
     1141 acaggatacc aaggtcaagt agatatccct ggtatcatca agagaatcga acaccaaaaa
     1201 acaattctac tgttccgaaa cagctcatcc acaaggacac cactagaatt tatcattgat
     1261 cacacattcg atgtaacaac agccgcaaca ccaacggcag acacactggc cagcaacaca
     1321 aaaggcaaca caaaatccat ctgcaacagt tgctcctact actttgtttc agcgacctat
     1381 gctattgcta tgtcaagcta ttaactataa gtgttcatca ttgcctgaaa cctccatcgc
     1441 cctttatccc taaggtatat aattgtgttc ttttctgctt aatcagttac ctatttctca
     1501 cttccaaatt ttgtgaaatt agttattgta gtagatgttt aatttgtcgt tatagtagga
     1561 acctaaatgc tatgctagat gaatatatta ttggactata tggtttattt gtgatagttg
     1621 gagacgctat tggtacatct ctcacttggc cttgtctgtt tatatcggtg gtacgtggag
     1681 attgatagag atagatgttg acatatgacg ttatgcgctg cttgtcatta attttacgtt
     1741 cttgttaaat gttattcgaa gtctttatat attgggatta attgtgaatt tttatgttta
     1801 gttttgtttg tgttatgaga ataa
//
LOCUS       XM_071830282            1375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            CONSTANS-LIKE 16-like (LOC139840058), mRNA.
ACCESSION   XM_071830282
VERSION     XM_071830282.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1375
                     /gene="LOC139840058"
                     /note="zinc finger protein CONSTANS-LIKE 16-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139840058"
     CDS             99..1274
                     /gene="LOC139840058"
                     /codon_start=1
                     /product="zinc finger protein CONSTANS-LIKE 16-like"
                     /protein_id="XP_071686383.1"
                     /db_xref="GeneID:139840058"
                     /translation="MVSSEKKVANVIGGKTARACDSCIRKRARWYCAADDAFLCQFCD
                     ALVHSANPLARTHERVRLKISSLKLSSLDIPPPTWHQGFTKKSRTPRSKKHVSHQTPK
                     SSKQINPLHLVPEIGSDELSPTNSDDQLITYQVPVLDPFPIELCFSGEFEQTKTSTSN
                     DADDHYNILANLEEEAQAPLQFDNLSGLILPSDLELAEFAADVENLLGNSLDEECFNI
                     DDLGMVDCKLNNIVKIEEEMIMRQQPFQLKFDYDSSKHEKVMKNEDEKRDVNIHDKKC
                     IKKLRLDYDGIISAWDDDRSPWTTGDRPELDPNDCSLDCMGECGKMEHYYGEDMRMMM
                     GNTARLDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAERRPRMKGRFVKRASFAV"
     misc_feature    153..284
                     /gene="LOC139840058"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; Region: Bbox1_BBX-like; cd19821"
                     /db_xref="CDD:380879"
     misc_feature    1128..1256
                     /gene="LOC139840058"
                     /note="CCT motif; Region: CCT; pfam06203"
                     /db_xref="CDD:461849"
     polyA_site      1375
                     /gene="LOC139840058"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaaacaagc atccaccacc atatttcttt ttttggttcc atttcaaaaa agaaatatat
       61 aaaaataatc taattttcga ctaacattgc atcattagat ggtgtcatca gagaagaagg
      121 tcgcaaatgt tatcggtggt aagacggcaa gagcgtgtga tagttgcata agaaaacgcg
      181 ctcgttggta ttgtgctgcc gatgacgctt tcttatgtca attttgtgac gcattggttc
      241 actcagcaaa ccctctggca cgtacccatg aaagggttcg cttaaaaata tcttctttaa
      301 aactttcgtc gttagatatt ccaccaccaa catggcacca gggtttcaca aaaaaatcgc
      361 gaacccctcg tagcaaaaaa catgtgtctc atcaaacacc aaaatcgtcc aaacaaatta
      421 atccacttca cttggtcccg gagattggta gtgatgaatt gtcccctacg aattccgatg
      481 accaacttat tacgtatcag gtaccggtgc ttgatccctt tccaatcgag ctttgctttt
      541 cgggtgaatt tgagcaaaca aagacctcga catccaacga tgcagatgac cattacaata
      601 ttttagctaa tttggaagag gaggctcaag ctccactaca atttgataat ttgagcggac
      661 taatactacc gtctgatttg gagctagccg agtttgctgc tgatgttgaa aacttgttag
      721 gaaatagtct tgatgaagaa tgtttcaata ttgatgactt aggaatggtg gattgtaaat
      781 taaacaatat tgtgaagatt gaagaagaga tgatcatgag acaacaacca tttcagttaa
      841 aatttgatta cgattcttca aaacatgaga aggttatgaa aaatgaagac gaaaaacgtg
      901 atgtaaatat acatgataaa aaatgtataa aaaagttaag gctagattat gatgggatta
      961 tttctgcttg ggatgatgat agatctccat ggacaaccgg tgacaggccg gagttggacc
     1021 ctaacgattg ttcgcttgat tgcatgggcg aatgtggaaa aatggagcat tattatggtg
     1081 aagatatgag gatgatgatg gggaatacgg ctcggttaga tggaggtaga gaagcgaggg
     1141 tgtcgagata cagagaaaag agacgaacaa ggttgttttc gaagaaaata aggtatgaag
     1201 tgaggaaact aaatgcagaa aggagacctc gaatgaaagg cagatttgtt aaaagggcaa
     1261 gttttgcagt ataatttagg tcatggcaat ctagattata tcaataataa ttgccgttta
     1321 taaagattca ttcatatgat atatgttgaa gaaaagcagt aaatttttga acttc
//
LOCUS       XM_071830283            1132 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chaperone protein dnaJ
            10-like (LOC139840059), mRNA.
ACCESSION   XM_071830283
VERSION     XM_071830283.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1132
                     /gene="LOC139840059"
                     /note="chaperone protein dnaJ 10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139840059"
     CDS             47..1132
                     /gene="LOC139840059"
                     /codon_start=1
                     /product="chaperone protein dnaJ 10-like"
                     /protein_id="XP_071686384.1"
                     /db_xref="GeneID:139840059"
                     /translation="MVKETEYYDVLGVKPTATESEIKKAYYIKARQVHPDKNPNDPLA
                     AQNFQVLGEAYQVLSNPDQRQAYDSYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQ
                     LAMASMASLDIFTDGEQFDAKKLQEKMRMVQKEREEKLIELLKNRLHEYVKGNKEEFT
                     RHAEAEVSRLSNAAYGVDMLSTIGYIYARQAAKELGKKAMYLGVPFIAEWFRNKGHFI
                     KSQVTAATGALALIQLQEDMKRQLSAEGKYTEEELEEYMQSHKKLMIDSLWKLNVADI
                     EATLSRVCQMVLQDTSVKKEELRARAKGLRILGRIFQKAKSDNGNVSEPILDSGMHNL
                     NGVDPDHPESGQSSQTAMAPQNNNKII"
     misc_feature    62..250
                     /gene="LOC139840059"
                     /note="DnaJ domain; Region: DnaJ; pfam00226"
                     /db_xref="CDD:395170"
     misc_feature    order(146..154,179..181,188..193,200..205)
                     /gene="LOC139840059"
                     /note="HSP70 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99751"
     misc_feature    443..1018
                     /gene="LOC139840059"
                     /note="X-domain of DnaJ-containing; Region: DnaJ-X;
                     pfam14308"
                     /db_xref="CDD:433858"
ORIGIN      
        1 agatcgattg ttaagcgaaa aaagaggcga ttagaaaccc tagcgaatgg tgaaggagac
       61 ggaatactac gatgttctcg gggttaagcc cacagctact gaatctgaga ttaagaaggc
      121 ttattacatc aaggcacggc aggtccatcc agataaaaat ccgaatgatc ctcttgcagc
      181 acaaaatttt caggttttag gggaagctta ccaggtatta agtaatccag accaaagaca
      241 ggcatatgac tcttatggga aatctggaat ctcaactgag gcaatcatcg accctgcagc
      301 catctttgca atgctttttg gtagtgagct atttgaagac tacattggcc agcttgcaat
      361 ggcgtccatg gcttctttgg atattttcac agacggggaa cagtttgatg ctaaaaagtt
      421 gcaagaaaaa atgaggatgg tgcaaaagga aagagaagag aagttaatcg aattacttaa
      481 aaatcgtctg cacgaatatg tgaaagggaa taaagaggag tttacgcgac atgctgaagc
      541 cgaagtatca agactctcca atgcagctta tggtgtggat atgctgagca caattggata
      601 tatttatgca cgacaagcag ccaaggagct gggtaaaaaa gctatgtatt tgggtgtacc
      661 ctttattgct gagtggttta gaaacaaagg acacttcatt aaatctcaag ttacagcagc
      721 aacaggtgct cttgctttaa ttcagcttca agaggacatg aaacgacagt taagtgcaga
      781 ggggaagtat acagaggagg aacttgaaga atacatgcag tcacataaga aactaatgat
      841 cgattctctt tggaagctaa atgttgctga tatcgaggcc acactttcgc gtgtttgtca
      901 aatggttctt caagatacat ctgtgaaaaa ggaggagcta cgtgcgagag ccaagggctt
      961 gaggattctt ggtcgaatct ttcagaaggc aaagtcagat aatggaaatg taagtgaacc
     1021 aatattagac tctggtatgc ataatctgaa tggagttgat ccagatcatc ccgaatctgg
     1081 acaaagctct caaactgcaa tggctcctca gaataataat aaaataatat ga
//
LOCUS       XM_071830284            1654 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-responsive
            transcription factor ERF116-like (LOC139840060), mRNA.
ACCESSION   XM_071830284
VERSION     XM_071830284.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1654
                     /gene="LOC139840060"
                     /note="ethylene-responsive transcription factor
                     ERF116-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139840060"
     CDS             476..1354
                     /gene="LOC139840060"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     ERF116-like"
                     /protein_id="XP_071686385.1"
                     /db_xref="GeneID:139840060"
                     /translation="MSLKKSRISSKSTEQSKHMRKIRVICYDPDLTDSSDDEKSNKKP
                     YGSKRIVREIKIPAVYDGGCTETVTTKETETENSCQDSNGGKTSKRKRVLTITPGQTR
                     PTSGKYRGVRQRKWGKWAAEIRDPFKQRRIWLGTYNTAEEASKAYEMKKLEFEAMAEA
                     SKGGSNNIKTPTKPSSSGAVSKPVNPTASEESVGVITHKSASSVYETETSSVSEMNET
                     KPMELIETLEVEDGLTFAELGQGLDMKLELDSMFFNTIDMPLDAFVDLDDFQLCGFDD
                     SEGCELPDWDFDELDL"
     misc_feature    794..>916
                     /gene="LOC139840060"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(800..805,809..811,815..817,821..823,827..829,
                     839..841,845..847,866..868,872..874,881..883)
                     /gene="LOC139840060"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
ORIGIN      
        1 atctatatat attataaatc tcataataat tttactcttt tttgaagatt gcacaatctc
       61 aaaaggggtt tttagagaga gaaaacaaag aagaaggttg gttttatgtc ggcaagttta
      121 ttgactgttc ttggggctcc attgaagctc tgtttccaat tttcatcatt tgttgctgtg
      181 tttctttgcg ctgttctctg ctgggttttt cagcagggtt ttcttttctg ttttccaact
      241 gtttcgatgc gtttgaggcc aaaaaggact tgttctggag tcgagtgttt tggtggattt
      301 catataaacc ggttatttga tcttttcttg ttcttgagag ggcctttaac ctaaaccctt
      361 caatttttta tttttatttt ttttctgctg ggttttagtt tttatagttt tattttgttt
      421 tgaggttatc tctttacggc taaaaagccg ccggaatttg aaagaagaac cccagatgag
      481 tctcaaaaaa tcaagaatca gttctaaaag tacggaacaa agcaaacaca tgagaaaaat
      541 tcgggtcatt tgctacgacc cggatttaac cgattcatcc gatgacgaaa agtccaacaa
      601 aaaaccctac gggtcaaaac ggattgtccg agaaatcaag attccggcgg tttacgacgg
      661 cggctgtacg gaaacggtca ctaccaagga aacggaaact gagaattcat gtcaagatag
      721 taacggcgga aaaacttcca aaagaaaaag ggttttgact ataaccccgg gtcaaacccg
      781 gccaacttcc ggtaaatacc ggggcgtccg gcaacgtaaa tggggcaaat gggctgctga
      841 aatccgtgac ccgtttaaac aaagacggat ttggcttggt acttacaata ctgctgaaga
      901 agcttctaaa gcttatgaaa tgaagaaact cgagtttgaa gccatggccg aggcttcaaa
      961 aggtggctcg aataacatca aaacccccac taaaccgtca tcgtcgggtg cggtttcgaa
     1021 gccggtaaac ccgaccgcat ccgaggaatc ggttggtgtc attacccaca aatcggcttc
     1081 ttcagtttat gagaccgaaa catcatctgt ttcagagatg aatgaaacga aacctatgga
     1141 acttatcgag acacttgagg ttgaagatgg gttgactttt gcggaattag gtcaagggtt
     1201 agacatgaaa ttggaactcg actcgatgtt tttcaataca attgatatgc cgttggatgc
     1261 atttgttgat cttgatgatt ttcagctatg tggattcgat gatagtgaag ggtgtgagtt
     1321 gcccgattgg gattttgacg aactcgacct ctaagagctt tgttggatga acacattgcg
     1381 ggttgatgag ccgcgatgat gaacaaacaa ccacttaata aggggtgctt ataagttttg
     1441 cagttagtta ataattagaa gagtgttttt caaggtgttt agataataat cctccttgaa
     1501 tactatggtt tttgatagtt aatttttttg tgttttgtta tatgagtcct ttgggtttta
     1561 ttgtgctatt agagccgtcc aaaggagtgt tcttgagttg ttacactatt gcaagtgtta
     1621 aaaacagtta tcttttgctt aattcaatct atct
//
LOCUS       XR_011757213            1856 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840062), transcript variant X1, ncRNA.
ACCESSION   XR_011757213
VERSION     XR_011757213.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1856
                     /gene="LOC139840062"
                     /note="uncharacterized LOC139840062; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840062"
     ncRNA           1..1856
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840062"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840062"
ORIGIN      
        1 caaatacgga gtaacaatag acgatagcca agcgcttact ctgcgagtcc aacaaataca
       61 tcgatcggct tcatctcttg agaaataatt ctctaaatta ggtttaaata taatcgatcg
      121 gcgtcagcga attggttcgt gatggatttg aagcatatag cactcgtcaa atcgttccat
      181 tcaaattcaa aaactgatac gaacaggtag actcgtcatt tagttattaa gatctgttta
      241 tatgtttgat tatgcaccat tttgttcaat tagttcgttt agttaggtta cgatgttaac
      301 taattctgtt attcacttgt tttgttgagt aattggtgca tttttccact tacatgttta
      361 ttgacttata attagggttt taagttaatt cttcttatta tgtacgggaa attcatattg
      421 atctctcatg taggcctatg tattggttgc ttactcaagt tatgccgcaa ataggctcaa
      481 agctatttgt ttgtttgtta catactttat tgctattgaa ttcaagtgtt tgaagctatc
      541 acgctattga tgcaccaatg aatcagaaac tccgagcagt gtgcatgaat agaactgtta
      601 atcattgtct tggttaatct taatatgtgt atatgtgtat ctgtacctag atcattaatg
      661 gaagaattag gacatcaaag agaactgaaa aggatatggc cagaaggatc attgatttgt
      721 gtagtatgct ttttctcatt attttggtag cctcaagtaa taaattaatc gtttctttct
      781 cttttaagta aacaatagat ctgaatatga ttttattcat ttttatacaa ctgatgcaag
      841 aagctaccca ttcaatttct ctcggcattt gagcatgtca atttaagatc ataggactta
      901 ctttactggt tttgagtgag tacttcaagt tctatcttca gctgtgtact tcctgatagc
      961 cttgaaacaa ctaccgttaa acacaagcca cagtatatca tacatacagt gtaaagcaaa
     1021 agatacaaat ttatcctaca cgccaatctg taaagttctt cggagatcga cactcacaag
     1081 tattaagtgg tttttgggag tttcattaaa caagatatgt atgtgaaggt tttgtgtgac
     1141 gccccgtaca aaaccatcgt gtacggttca tcaataacag gatcactaca aagtcaaaca
     1201 ctatatgctg tttaaaaacc agttttgcat tcataaaaat atagtgtttt acaaaagata
     1261 acgtgcttcc aatgaataga agccttaaca taagtatgtg acccaaaggt cgttacaaag
     1321 ccactgtttg aaaataacat aagttacgaa tgcaaaataa aagtttcatg attgagacat
     1381 ctctaagtaa tgcagcggaa atttaacaca gcaggcccat aacagcaagt ctataacacc
     1441 aagacagcaa gtctaacagc ggaagcaaca tcgtctaagc acctgagaaa tacacgctta
     1501 aaagtcaaca cgaatgttga catatatggt ttttaggcta acatctggaa gaattgatac
     1561 tacacaagta caaaagggtt tacacggaag ttgagctcaa catcaaacct atttggacaa
     1621 agctaaagct cggattagag ttgatgctcc ggggctctca accttgctct tacaaagcta
     1681 aagctgagct caacatcaac cttgtgaaac catggtatta acagagtcga tcgaggaact
     1741 ttcagatttt caaaatagga atacatgaag cacagacaac ttatgcaata taaaatctgt
     1801 atatatctat agcattagaa tatgtaaagt gatgagactt gttatatgaa attgaa
//
LOCUS       XR_011757214            1629 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840062), transcript variant X2, ncRNA.
ACCESSION   XR_011757214
VERSION     XR_011757214.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1629
                     /gene="LOC139840062"
                     /note="uncharacterized LOC139840062; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840062"
     ncRNA           1..1629
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840062"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840062"
ORIGIN      
        1 caaatacgga gtaacaatag acgatagcca agcgcttact ctgcgagtcc aacaaataca
       61 tcgatcggct tcatctcttg agaaataatt ctctaaatta ggtttaaata taatcgatcg
      121 gcgtcagcga attggttcgt gatggatttg aagcatatag cactcgtcaa atcgttccat
      181 tcaaattcaa aaactgatac gaacaggcct atgtattggt tgcttactca agttatgccg
      241 caaataggct caaagctatt tgtttgtttg ttacatactt tattgctatt gaattcaagt
      301 gtttgaagct atcacgctat tgatgcacca atgaatcaga aactccgagc agtgtgcatg
      361 aatagaactg ttaatcattg tcttggttaa tcttaatatg tgtatatgtg tatctgtacc
      421 tagatcatta atggaagaat taggacatca aagagaactg aaaaggatat ggccagaagg
      481 atcattgatt tgtgtagtat gctttttctc attattttgg tagcctcaag taataaatta
      541 atcgtttctt tctcttttaa gtaaacaata gatctgaata tgattttatt catttttata
      601 caactgatgc aagaagctac ccattcaatt tctctcggca tttgagcatg tcaatttaag
      661 atcataggac ttactttact ggttttgagt gagtacttca agttctatct tcagctgtgt
      721 acttcctgat agccttgaaa caactaccgt taaacacaag ccacagtata tcatacatac
      781 agtgtaaagc aaaagataca aatttatcct acacgccaat ctgtaaagtt cttcggagat
      841 cgacactcac aagtattaag tggtttttgg gagtttcatt aaacaagata tgtatgtgaa
      901 ggttttgtgt gacgccccgt acaaaaccat cgtgtacggt tcatcaataa caggatcact
      961 acaaagtcaa acactatatg ctgtttaaaa accagttttg cattcataaa aatatagtgt
     1021 tttacaaaag ataacgtgct tccaatgaat agaagcctta acataagtat gtgacccaaa
     1081 ggtcgttaca aagccactgt ttgaaaataa cataagttac gaatgcaaaa taaaagtttc
     1141 atgattgaga catctctaag taatgcagcg gaaatttaac acagcaggcc cataacagca
     1201 agtctataac accaagacag caagtctaac agcggaagca acatcgtcta agcacctgag
     1261 aaatacacgc ttaaaagtca acacgaatgt tgacatatat ggtttttagg ctaacatctg
     1321 gaagaattga tactacacaa gtacaaaagg gtttacacgg aagttgagct caacatcaaa
     1381 cctatttgga caaagctaaa gctcggatta gagttgatgc tccggggctc tcaaccttgc
     1441 tcttacaaag ctaaagctga gctcaacatc aaccttgtga aaccatggta ttaacagagt
     1501 cgatcgagga actttcagat tttcaaaata ggaatacatg aagcacagac aacttatgca
     1561 atataaaatc tgtatatatc tatagcatta gaatatgtaa agtgatgaga cttgttatat
     1621 gaaattgaa
//
LOCUS       XR_011757215            1412 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840062), transcript variant X3, ncRNA.
ACCESSION   XR_011757215
VERSION     XR_011757215.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1412
                     /gene="LOC139840062"
                     /note="uncharacterized LOC139840062; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840062"
     ncRNA           1..1412
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840062"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840062"
ORIGIN      
        1 caaatacgga gtaacaatag acgatagcca agcgcttact ctgcgagtcc aacaaataca
       61 tcgatcggct tcatctcttg agaaataatt ctctaaatta ggtttaaata taatcgatcg
      121 gcgtcagcga attggttcgt gatggatttg aagcatatag cactcgtcaa atcgttccat
      181 tcaaattcaa aaactgatac gaacagatca ttaatggaag aattaggaca tcaaagagaa
      241 ctgaaaagga tatggccaga aggatcattg atttgtgtag tatgcttttt ctcattattt
      301 tggtagcctc aagtaataaa ttaatcgttt ctttctcttt taagtaaaca atagatctga
      361 atatgatttt attcattttt atacaactga tgcaagaagc tacccattca atttctctcg
      421 gcatttgagc atgtcaattt aagatcatag gacttacttt actggttttg agtgagtact
      481 tcaagttcta tcttcagctg tgtacttcct gatagccttg aaacaactac cgttaaacac
      541 aagccacagt atatcataca tacagtgtaa agcaaaagat acaaatttat cctacacgcc
      601 aatctgtaaa gttcttcgga gatcgacact cacaagtatt aagtggtttt tgggagtttc
      661 attaaacaag atatgtatgt gaaggttttg tgtgacgccc cgtacaaaac catcgtgtac
      721 ggttcatcaa taacaggatc actacaaagt caaacactat atgctgttta aaaaccagtt
      781 ttgcattcat aaaaatatag tgttttacaa aagataacgt gcttccaatg aatagaagcc
      841 ttaacataag tatgtgaccc aaaggtcgtt acaaagccac tgtttgaaaa taacataagt
      901 tacgaatgca aaataaaagt ttcatgattg agacatctct aagtaatgca gcggaaattt
      961 aacacagcag gcccataaca gcaagtctat aacaccaaga cagcaagtct aacagcggaa
     1021 gcaacatcgt ctaagcacct gagaaataca cgcttaaaag tcaacacgaa tgttgacata
     1081 tatggttttt aggctaacat ctggaagaat tgatactaca caagtacaaa agggtttaca
     1141 cggaagttga gctcaacatc aaacctattt ggacaaagct aaagctcgga ttagagttga
     1201 tgctccgggg ctctcaacct tgctcttaca aagctaaagc tgagctcaac atcaaccttg
     1261 tgaaaccatg gtattaacag agtcgatcga ggaactttca gattttcaaa ataggaatac
     1321 atgaagcaca gacaacttat gcaatataaa atctgtatat atctatagca ttagaatatg
     1381 taaagtgatg agacttgtta tatgaaattg aa
//
LOCUS       XM_071830285            1179 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840063), mRNA.
ACCESSION   XM_071830285
VERSION     XM_071830285.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1179
                     /gene="LOC139840063"
                     /note="uncharacterized LOC139840063; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840063"
     CDS             75..836
                     /gene="LOC139840063"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686386.1"
                     /db_xref="GeneID:139840063"
                     /translation="MPQILPSIRSLIASPLSNISLNPKLISRYTPPISQFSISVNLHR
                     TSQSVSSSSRSRVLSSMSTNGGNAVAQFNLSPTTALKIQKGDITRWFIDSSSDAIVNA
                     ANERMLGGGGVDGAIHRAAGPELRTACYNVPEVRPGVRCPTGEARITPGFKLPASHVI
                     HTVGPVYDEDSNAAVSLSNAYSNSLRVAREKNIQYVAFPAISCGVYGYPFDDAATVAI
                     STIKEHCNDIKEVHFVLFLDDIFNVWLKKAEELLP"
     misc_feature    312..821
                     /gene="LOC139840063"
                     /note="macrodomain, O-acetyl-ADP-ribose (OAADPr) family;
                     Region: Macro_OAADPr_deacetylase; cd02908"
                     /db_xref="CDD:438955"
     misc_feature    order(327..335,378..386,399..416,420..422,429..431,
                     564..566,570..572,669..692,774..776,780..785,792..794)
                     /gene="LOC139840063"
                     /note="active site"
                     /db_xref="CDD:438955"
ORIGIN      
        1 tcgtttatct gctaccgtag aaataacgca actatcagag tactgttaca ctaccacagt
       61 gtctaacaca acaaatgccc caaattttac catcaattcg ctctttaatc gcatctcctc
      121 tttctaatat ttctctaaac cctaaattaa tctccagata cacaccgcca atatctcaat
      181 tcagcatatc tgttaacctt catcgtacat ctcaatcagt ttcatccagc agtagatcta
      241 gggttttatc aagtatgtct accaatgggg gtaacgctgt agctcaattc aatctatctc
      301 caaccactgc cctcaaaatt caaaaagggg atatcactcg ttggttcatc gatagctctt
      361 ccgatgccat tgtcaatgca gcaaacgagc ggatgcttgg cggtggtggt gttgatggag
      421 ctatacaccg agctgcgggg ccagaattgc gaacagcatg ttataacgtt cctgaagttc
      481 gtccaggagt tcgttgtcca actggagaag ctagaattac tccaggattc aaattgcctg
      541 catctcatgt gattcacact gtcggacctg tttatgatga agatagcaac gctgcagtct
      601 cattgagcaa tgcttacagt aatagtctgc gtgttgcaag agagaagaat attcagtatg
      661 tcgcatttcc tgccatatct tgtggcgtgt atggatatcc ttttgatgac gctgctactg
      721 tggccatatc tacaataaaa gagcattgca atgacattaa agaggttcac tttgtgcttt
      781 ttttggatga tatatttaac gtttggttga aaaaggctga agagttactc ccatagtatc
      841 gcatgcattg acattaaata tctatcgtcc aaatcaagta atgttagtct aggttgctct
      901 ctcaaatctc cgtatccttt catttatttg ctttcttggt tggtaatgta ggtttcaggg
      961 ccacttttag ttatcaactt caaaattatt ggtattagct acttatcacc tgttataatt
     1021 tctcgtccat ggtgtactat tcatgaagat ttagatgctt tttactacct atttcacatg
     1081 agtatgtttt gtttttggga tacttgattt gaatatgtta agggagtatc caactatgac
     1141 tcgttattta caaggtgtac cattttggta tattgtgtg
//
LOCUS       XM_071830286            1128 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dihydrodipicolinate
            reductase-like protein CRR1, chloroplastic (LOC139840064), mRNA.
ACCESSION   XM_071830286
VERSION     XM_071830286.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1128
                     /gene="LOC139840064"
                     /note="dihydrodipicolinate reductase-like protein CRR1,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139840064"
     CDS             61..972
                     /gene="LOC139840064"
                     /codon_start=1
                     /product="dihydrodipicolinate reductase-like protein CRR1,
                     chloroplastic"
                     /protein_id="XP_071686387.1"
                     /db_xref="GeneID:139840064"
                     /translation="MAGLKIQAHTISHTTSYYHKSTNSISISCSMQQPPQNNIKVVIN
                     GAAKEIGMASVLAVTKARGMEIVGAIDSHLVGEDIGKVCGMEEALEIPIISDLTMVLG
                     SISQSKATSVVVDFTDPSTVYDNVKQATAFGMNSVVYVPRIKPETVAALSAFCEKASM
                     GCLIAPTLSIGSILLQQAAISASFHYKNVEIVESKANKGAFPSPDAMQIAKNLTNLGQ
                     LYNRDDLDTNEPARGQRVGEDGVRVHSLVLPGLVSSTTVHFSGPGEMYSIKHDITNVE
                     CLMPGLILAIRQVVRLKNLVYGLEKFL"
     misc_feature    175..969
                     /gene="LOC139840064"
                     /note="4-hydroxy-tetrahydrodipicolinate reductase [Amino
                     acid transport and metabolism]; Region: DapB; COG0289"
                     /db_xref="CDD:440058"
ORIGIN      
        1 tcaataaata cttgataaac atttacataa agcttatctg catagcttga aggagcaaaa
       61 atggccggtc tcaaaattca agcccacacc ataagccaca caacttcata ctaccacaaa
      121 agtaccaact caatttccat ttcttgctca atgcaacagc ctcctcaaaa caacatcaag
      181 gtggtcataa atggagcagc caaagagatt ggaatggctt ctgtattagc agtcacaaaa
      241 gctagaggaa tggaaattgt tggagctatc gattcgcatc tcgttggaga agatatagga
      301 aaggtttgtg gcatggaaga agctctagag atacccatta ttagtgatct tacaatggta
      361 cttggttcca tatctcagtc aaaagcaaca tcagtggtgg tagatttcac cgacccatca
      421 acagtttatg acaatgtcaa acaggcaaca gcatttggta tgaatagtgt tgtttacgta
      481 ccacgaatca agcctgaaac cgtagcagca ttatctgcat tctgtgaaaa agccagcatg
      541 ggttgtttga ttgcaccaac gttgtccata ggatcgatac tgctccagca agctgcaatt
      601 tcagcttctt tccattataa aaatgtggag attgttgaat ctaaagctaa caaaggagcg
      661 tttccttcac cagatgctat gcagatagcc aaaaacctaa ccaacctcgg gcaactttac
      721 aatagagacg atcttgatac taatgaaccg gcaagagggc aacgagtagg agaagatggt
      781 gttcgtgtgc atagtttagt tcttccggga ctcgtgtcta gtaccacagt tcatttctcg
      841 ggccccggag agatgtattc aatcaaacac gatatcacga atgttgagtg cctaatgcca
      901 ggacttattt tagcgatcag gcaagtcgtg cgtcttaaga atcttgttta cggcttagag
      961 aagttcttgt agagaagcag tgtatggatt tcgcccatcg agctctcaaa ctatgtaaca
     1021 tttgcgttat cgggaatttt taaatgaacc gagctacatt tttaccctag tacgattgat
     1081 atgagcatgt ttctacacta gttataatga aatatatata ctttgcta
//
LOCUS       XM_071830288            1962 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840065), transcript variant X1, mRNA.
ACCESSION   XM_071830288
VERSION     XM_071830288.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1962
                     /gene="LOC139840065"
                     /note="uncharacterized LOC139840065; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 33
                     Proteins"
                     /db_xref="GeneID:139840065"
     CDS             79..1836
                     /gene="LOC139840065"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686389.1"
                     /db_xref="GeneID:139840065"
                     /translation="MAEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTR
                     KELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGIEHAHVLLPPLETLCTVEETCVRD
                     KAVESLCRIGSQMRESDLVDSFVPLVKRLAGGEWFTARVSACGLFHIAYPSASETLKA
                     ELRSVFSQLCQDDMPMVRRAAATNLGKFAATVESAHLKTDIMQIFEDLTHDDQDSVRL
                     LAVEGCAALGKLLEPQDCVAQILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTK
                     KDLVPAYVRLLRDNEAEVRIAAAGKVTKFSRILSPELAIQHILPCVKELSSDSSQHVR
                     SALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLEQVNQVIGIDLL
                     SQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDEKLGSLCMQWLQDKVYSI
                     RDAAANNIKRLAEEFGPDWSMQHIVPQVLDMIKNPHYLYRMTVLRTISLLAPVMGSEI
                     TCSKLLPVVINASKDRVPNIKFNVAKVLQSLIPIVEHTVVEKSIQPCLVELAEDPDVD
                     VRYFANRALQSIDQVMMST"
     misc_feature    103..177
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    145..645
                     /gene="LOC139840065"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    order(151..156,163..165,172..177,265..270,277..279,
                     286..291,298..300,382..387,394..396,403..408,415..417,
                     499..504,511..513,520..522,613..618,625..627,634..639)
                     /gene="LOC139840065"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    217..300
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    328..420
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    445..522
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    553..642
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    580..975
                     /gene="LOC139840065"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    676..768
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    799..873
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    841..1329
                     /gene="LOC139840065"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    order(847..852,859..861,868..873,964..969,976..978,
                     985..990,997..999,1081..1086,1093..1095,1102..1107,
                     1114..1116,1198..1203,1210..1212,1219..1224,1315..1320,
                     1327..1329,1336..1341)
                     /gene="LOC139840065"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    913..999
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1027..1119
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1144..1224
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1255..1344
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1378..1458
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1396..1812
                     /gene="LOC139840065"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    1489..1578
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1606..1686
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1723..1803
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
ORIGIN      
        1 ataataatca aaatcaaaga ccataaacga agaacactgc caaaccctag tatccgtagt
       61 gtgtgagcta caatttccat ggctgaagaa cctttgtatc caatagctgt attaatagat
      121 gaattgaaga acgatgatat acaattacgg ttgaattcaa ttagaaggtt atctactatt
      181 gcacgtgctt taggagagga acgaactcga aaagagttga ttcctttttt gagtgagaat
      241 aatgatgatg atgatgaagt tcttcttgca atggcggaag aattaggtgt gtttattcct
      301 tatgttggtg gaattgaaca tgctcatgtg ttgttaccgc ctcttgaaac gttatgtacc
      361 gttgaagaga cgtgtgtgag agataaagct gtcgaatcat tgtgtagaat cggatcgcag
      421 atgcgagaga gcgatttggt tgattcgttt gtacctttgg ttaagcggtt ggcagggggt
      481 gaatggttta cggctcgagt ttcagcttgt ggactgtttc atattgcgta tcctagcgct
      541 tcggagacgt tgaaggcgga actgagatcg gtgtttagtc agttatgtca agatgatatg
      601 ccgatggtca ggagagcagc tgcgacaaat ttggggaagt ttgctgctac tgttgaatct
      661 gctcatctca agactgatat aatgcaaatc tttgaggatc ttacacatga tgatcaagat
      721 tcagttcgtt tactagccgt tgaaggctgt gccgcacttg ggaagctgct agaaccgcag
      781 gactgcgttg cacaaattct tcctgtcatt gttaattttt ctcaagacaa gtcttggcgt
      841 gttcgctata tggttgctaa ccaattgtat gagctatgtg aagctgtggg ccctgaacct
      901 actaagaagg acttggtgcc agcatatgtg aggctacttc gtgataatga agctgaagta
      961 cgtattgcag ctgctggaaa ggtcactaaa ttcagtcgga ttcttagccc agaacttgct
     1021 attcaacata ttcttccttg tgtaaaggaa ctgtcatccg attcttctca gcatgttagg
     1081 tctgctctgg cttctgttat aatgggcatg gcccccgttc tagggaagga tgctacaatc
     1141 gagcaacttc ttcctatatt tctttcactg ctaaaagatg aatttccaga tgtacgcctc
     1201 aatatcatta gcaagctaga acaagtaaat caggttattg gaatcgacct tttgtcccaa
     1261 tctttacttc cagcaatcgt tgaacttgct gaagatcgac attggagggt tcgtttagca
     1321 atcatcgagt acataccact tttggccagt cagttaggcg ttggtttttt tgatgagaaa
     1381 cttggttctc tctgcatgca atggttacaa gacaaggtgt actcgatcag agatgctgct
     1441 gctaacaaca taaagcgtct tgcagaggaa ttcggtccag attggtcaat gcagcacatt
     1501 gtcccacagg ttctggatat gattaaaaac cctcattact tgtaccgtat gactgttctt
     1561 cgtactattt cattgctggc ccctgttatg ggttcagaaa taacttgttc taagctgctt
     1621 cccgttgtta ttaacgcatc caaggacaga gtgccaaata tcaaattcaa cgtagcaaag
     1681 gtcctgcaat ccctaattcc tatagtcgaa cacacggtgg tagagaaaag tattcagcca
     1741 tgtctagttg agttggcaga ggacccagat gttgatgttc gttattttgc caaccgagcg
     1801 cttcaatcaa ttgaccaagt catgatgtct acctaaacaa gttgctgatt gtatgttttc
     1861 tggacttgtg tttggactga aaagacttgc tacttgcccc ttatttgaat ggtagcttct
     1921 atcttcatag tagctgctgc atcttcttcc atataatact tc
//
LOCUS       XM_071830289            2000 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840065), transcript variant X2, mRNA.
ACCESSION   XM_071830289
VERSION     XM_071830289.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2000
                     /gene="LOC139840065"
                     /note="uncharacterized LOC139840065; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840065"
     CDS             117..1874
                     /gene="LOC139840065"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686390.1"
                     /db_xref="GeneID:139840065"
                     /translation="MAEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTR
                     KELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGIEHAHVLLPPLETLCTVEETCVRD
                     KAVESLCRIGSQMRESDLVDSFVPLVKRLAGGEWFTARVSACGLFHIAYPSASETLKA
                     ELRSVFSQLCQDDMPMVRRAAATNLGKFAATVESAHLKTDIMQIFEDLTHDDQDSVRL
                     LAVEGCAALGKLLEPQDCVAQILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTK
                     KDLVPAYVRLLRDNEAEVRIAAAGKVTKFSRILSPELAIQHILPCVKELSSDSSQHVR
                     SALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLEQVNQVIGIDLL
                     SQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDEKLGSLCMQWLQDKVYSI
                     RDAAANNIKRLAEEFGPDWSMQHIVPQVLDMIKNPHYLYRMTVLRTISLLAPVMGSEI
                     TCSKLLPVVINASKDRVPNIKFNVAKVLQSLIPIVEHTVVEKSIQPCLVELAEDPDVD
                     VRYFANRALQSIDQVMMST"
     misc_feature    141..215
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    183..683
                     /gene="LOC139840065"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    order(189..194,201..203,210..215,303..308,315..317,
                     324..329,336..338,420..425,432..434,441..446,453..455,
                     537..542,549..551,558..560,651..656,663..665,672..677)
                     /gene="LOC139840065"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    255..338
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    366..458
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    483..560
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    591..680
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    618..1013
                     /gene="LOC139840065"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    714..806
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    837..911
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    879..1367
                     /gene="LOC139840065"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    order(885..890,897..899,906..911,1002..1007,1014..1016,
                     1023..1028,1035..1037,1119..1124,1131..1133,1140..1145,
                     1152..1154,1236..1241,1248..1250,1257..1262,1353..1358,
                     1365..1367,1374..1379)
                     /gene="LOC139840065"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    951..1037
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1065..1157
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1182..1262
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1293..1382
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1416..1496
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1434..1850
                     /gene="LOC139840065"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    1527..1616
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1644..1724
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1761..1841
                     /gene="LOC139840065"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
ORIGIN      
        1 ttaatttctg tatctcgcat taactttata tgctgattca actggttgac atagcgtctg
       61 agtaatactg taattagatc acatatatta tccgtagtgt gtgagctaca atttccatgg
      121 ctgaagaacc tttgtatcca atagctgtat taatagatga attgaagaac gatgatatac
      181 aattacggtt gaattcaatt agaaggttat ctactattgc acgtgcttta ggagaggaac
      241 gaactcgaaa agagttgatt ccttttttga gtgagaataa tgatgatgat gatgaagttc
      301 ttcttgcaat ggcggaagaa ttaggtgtgt ttattcctta tgttggtgga attgaacatg
      361 ctcatgtgtt gttaccgcct cttgaaacgt tatgtaccgt tgaagagacg tgtgtgagag
      421 ataaagctgt cgaatcattg tgtagaatcg gatcgcagat gcgagagagc gatttggttg
      481 attcgtttgt acctttggtt aagcggttgg cagggggtga atggtttacg gctcgagttt
      541 cagcttgtgg actgtttcat attgcgtatc ctagcgcttc ggagacgttg aaggcggaac
      601 tgagatcggt gtttagtcag ttatgtcaag atgatatgcc gatggtcagg agagcagctg
      661 cgacaaattt ggggaagttt gctgctactg ttgaatctgc tcatctcaag actgatataa
      721 tgcaaatctt tgaggatctt acacatgatg atcaagattc agttcgttta ctagccgttg
      781 aaggctgtgc cgcacttggg aagctgctag aaccgcagga ctgcgttgca caaattcttc
      841 ctgtcattgt taatttttct caagacaagt cttggcgtgt tcgctatatg gttgctaacc
      901 aattgtatga gctatgtgaa gctgtgggcc ctgaacctac taagaaggac ttggtgccag
      961 catatgtgag gctacttcgt gataatgaag ctgaagtacg tattgcagct gctggaaagg
     1021 tcactaaatt cagtcggatt cttagcccag aacttgctat tcaacatatt cttccttgtg
     1081 taaaggaact gtcatccgat tcttctcagc atgttaggtc tgctctggct tctgttataa
     1141 tgggcatggc ccccgttcta gggaaggatg ctacaatcga gcaacttctt cctatatttc
     1201 tttcactgct aaaagatgaa tttccagatg tacgcctcaa tatcattagc aagctagaac
     1261 aagtaaatca ggttattgga atcgaccttt tgtcccaatc tttacttcca gcaatcgttg
     1321 aacttgctga agatcgacat tggagggttc gtttagcaat catcgagtac ataccacttt
     1381 tggccagtca gttaggcgtt ggtttttttg atgagaaact tggttctctc tgcatgcaat
     1441 ggttacaaga caaggtgtac tcgatcagag atgctgctgc taacaacata aagcgtcttg
     1501 cagaggaatt cggtccagat tggtcaatgc agcacattgt cccacaggtt ctggatatga
     1561 ttaaaaaccc tcattacttg taccgtatga ctgttcttcg tactatttca ttgctggccc
     1621 ctgttatggg ttcagaaata acttgttcta agctgcttcc cgttgttatt aacgcatcca
     1681 aggacagagt gccaaatatc aaattcaacg tagcaaaggt cctgcaatcc ctaattccta
     1741 tagtcgaaca cacggtggta gagaaaagta ttcagccatg tctagttgag ttggcagagg
     1801 acccagatgt tgatgttcgt tattttgcca accgagcgct tcaatcaatt gaccaagtca
     1861 tgatgtctac ctaaacaagt tgctgattgt atgttttctg gacttgtgtt tggactgaaa
     1921 agacttgcta cttgcccctt atttgaatgg tagcttctat cttcatagta gctgctgcat
     1981 cttcttccat ataatacttc
//
LOCUS       XM_071830290            1787 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RNA polymerase II C-terminal
            domain phosphatase-like 4 (LOC139840066), mRNA.
ACCESSION   XM_071830290
VERSION     XM_071830290.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1787
                     /gene="LOC139840066"
                     /note="RNA polymerase II C-terminal domain
                     phosphatase-like 4; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840066"
     CDS             155..1540
                     /gene="LOC139840066"
                     /codon_start=1
                     /product="RNA polymerase II C-terminal domain
                     phosphatase-like 4"
                     /protein_id="XP_071686391.1"
                     /db_xref="GeneID:139840066"
                     /translation="MSVVDSPVNSSSSDDFASFLDTELDSVSDSASQPEENLEEEDEE
                     EEEEEEDDYDYKSLIVSAKRRKISVLGSTEESSGSTSHIEQVEVLEASVNKNMCSHPG
                     FIGGMCLKCGEKADNQSGVAFGYIHKDLRLADDEINRLRENDLKNLLRHKKLILVLDL
                     DHTLLNSTRMSDVTQEEQYLMNPDDPSQDALRGSLFKLPFMHMVTKLRPFVHTFLKEA
                     SKLFEMYIYTMGERAYALEMANLLDPGKVYFDSKVIAQGDCTTKHQKGLDVLLGQESA
                     VLILDDTEQVWMKHKDSLILMERYLFFASGCKQFDYKIKSLSELRSDESETDGALASV
                     LKVLKRVHSMFFDPELGDNFADRDVRKMLGAVRSEVLKGCKVVFSRVLPSKYDLWMLA
                     ERLGATCLTEVDTSVTHVISTDAGTEKSRWAVKEKKFLVEPRWLLAANFLWKRQPEEK
                     FPVKKVVKDGN"
     misc_feature    596..1063
                     /gene="LOC139840066"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; Region: Haloacid Dehalogenase-like Hydrolases;
                     cl21460"
                     /db_xref="CDD:473868"
     misc_feature    order(629..643,653..658,833..844,854..856,947..949,
                     995..1000,1004..1012)
                     /gene="LOC139840066"
                     /note="active site"
                     /db_xref="CDD:319823"
     misc_feature    1226..1498
                     /gene="LOC139840066"
                     /note="BRCT domain of RNA polymerase II subunit A
                     C-terminal domain phosphatase (CTDP1) and similar
                     proteins; Region: BRCT_CTDP1; cd17729"
                     /db_xref="CDD:349361"
ORIGIN      
        1 aaacccgttc tctaccctca gatcatctct aacacacggg cgtcgtcaac cgtgtgctcc
       61 tccggcgaac gtcatcctcc gccggcattg aggaccacca ccgctgcggc ttcgtcgaca
      121 attactcttc cagtgacgac tacatcgatc tctcatgagt gttgttgatt ctccggtgaa
      181 ctcatcaagc agtgatgatt ttgcctcgtt tctggatacc gaactggatt ccgtgtctga
      241 ttctgcatct caacctgaag aaaacctaga ggaagaagat gaagaagagg aagaggaaga
      301 agaagatgac tatgattata agtcacttat tgtaagcgca aagaggagga agattagcgt
      361 attgggaagt actgaagaat caagcggttc aacatctcat attgaacaag tggaagtgtt
      421 agaagcatca gtaaacaaga atatgtgctc acatcctggt tttattggag gaatgtgttt
      481 aaagtgtgga gagaaagcgg acaatcagtc aggtgttgca tttgggtata tacacaagga
      541 tctgaggctt gctgatgatg aaattaatcg actgcgtgag aatgatctaa agaatttgtt
      601 gcgtcataaa aagcttattt tggtccttga cttagaccac acattactaa actcaactag
      661 gatgtctgat gtcactcagg aagaacaata tctgatgaac cctgatgatc cttctcaaga
      721 tgcactaaga ggtagtcttt tcaaactgcc attcatgcac atggtaacta agttgaggcc
      781 tttcgttcac actttcttga aagaagcaag taaactgttt gaaatgtaca tttacactat
      841 gggtgagcgc gcttatgcgt tagaaatggc aaatctgctc gatcctggta aggtttactt
      901 tgactctaaa gttattgctc aaggtgattg taccacaaag catcagaaag gccttgacgt
      961 gctactcggg caagaaagtg ctgttctgat ccttgatgat actgaacagg tatggatgaa
     1021 gcacaaggat agtttgatct taatggaaag atatcttttt ttcgcgtctg gttgtaaaca
     1081 atttgactac aagattaaat ctctttctga attgagaagt gacgaaagtg aaactgatgg
     1141 tgctcttgca tcggttctta aagtgcttaa acgagtacac agtatgtttt ttgacccgga
     1201 gctgggggac aattttgcag accgagatgt taggaagatg ttaggtgcag ttcgtagtga
     1261 agttttgaaa ggatgtaaag ttgtgttcag tcgtgtgcta ccatcaaaat acgatttgtg
     1321 gatgctggca gaaagattag gagctacatg tttgaccgag gttgacacgt cagtgacaca
     1381 tgtaatatct acagatgctg gaaccgaaaa gtcacgttgg gcagttaagg aaaagaagtt
     1441 tttggttgaa ccacggtggc tattagcggc aaatttctta tggaagaggc aacctgaaga
     1501 aaagtttcct gttaaaaaag tggtaaaaga tggcaattga cccccctccc ttgctctctt
     1561 tattttggcc caccagatag aaagttgtga ttttctggaa taggtgatta ttagaggcac
     1621 aagattgtaa acttttacat ttgcattttg gctcttatgt ggttaaagga aagttaaaaa
     1681 gactaggaat atgtgatttg taaatatttt tagaaaatat aaaaagctga ctaaatggta
     1741 tctattgtgg catgggtgtt ttaattttta aagccgtcta accttta
//
LOCUS       XM_071830291            1070 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GDT1-like protein 4
            (LOC139840067), mRNA.
ACCESSION   XM_071830291
VERSION     XM_071830291.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1070
                     /gene="LOC139840067"
                     /note="GDT1-like protein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840067"
     CDS             52..741
                     /gene="LOC139840067"
                     /codon_start=1
                     /product="GDT1-like protein 4"
                     /protein_id="XP_071686392.1"
                     /db_xref="GeneID:139840067"
                     /translation="MSLSILQGFSKSLAMTVLSEIGDKTFFAAAILAMRYPRRYVLAG
                     CLSALIVMTILSAVVGWAAPNLISRTLTKHIATVLFLGFGFWSLWDAFHEGESGELAE
                     VEAELDADLKANGKSTKSNDKSDDEAKKKTRPFMSQIFSPIFLKAFSITFFGEWGDKS
                     QIATIGLAAAENPLGVVLGGILGQALCQTAAVFGGKSLAKQISEKFIALSGGALFIVF
                     GIQSFFATVES"
     misc_feature    67..732
                     /gene="LOC139840067"
                     /note="Putative Ca2+/H+ antiporter, TMEM165/GDT1 family
                     [General function prediction only]; Region: Gdt1; COG2119"
                     /db_xref="CDD:441722"
ORIGIN      
        1 tttatcaact ctaagctagt aagcttattc ttcttgatcc aggctacagt catgagtttg
       61 tcaattcttc aagggtttag caagtctctt gcgatgactg tactatctga aatcggtgac
      121 aaaacatttt ttgctgctgc gattttggcg atgcgttacc ccaggcgata tgttttggca
      181 ggctgccttt cagctttgat tgttatgacc attctttctg ctgttgttgg ctgggctgct
      241 ccaaacctga tctcccgaac gttaactaaa catatagcca ctgtgttgtt tttggggttc
      301 ggtttttggt ccttatggga tgcttttcat gaaggggaat caggagaatt agctgaggtt
      361 gaagcagaat tggatgctga tctaaaagcc aacggcaaat caactaaatc aaatgacaag
      421 tctgatgacg aggctaaaaa gaagactaga ccatttatgt ctcaaatttt ctcccccatc
      481 tttttgaagg cattttctat aaccttcttt ggggagtggg gtgacaaaag tcagatagct
      541 acgattggtt tggctgccgc tgagaaccca ctcggtgttg tccttggggg aattttaggg
      601 caagctttgt gtcagaccgc tgctgtcttt ggagggaaaa gcttggctaa acagatatcc
      661 gaaaaattca ttgcactatc gggtggagct ctattcatcg tctttggaat ccagtcgttc
      721 tttgcaaccg ttgaatcttg agttttggtg ttctggaaat tattatttaa aagaagatag
      781 gaatggagtg atgtgttgaa gaagacacat tgtttgatgc ttcactaatt tttcttaatt
      841 tgcaaattgg aaaaaagatc aattgaaaac aatggtacaa tgcaaaacta tattatgcaa
      901 tagtactgac atcattaagg aggaagttaa acacttatat tcaatattac ttgcatcatt
      961 atgcttgcaa gttgctattc taagtgatta aaaaatgttc agttagtagt tgaatttgca
     1021 gacatgcatg agtccttccc tgctttttct cttttacttt gaaaaatgtc
//
LOCUS       XM_071830292            1479 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AP2/ERF and B3
            domain-containing transcription repressor TEM1-like (LOC139840068),
            mRNA.
ACCESSION   XM_071830292
VERSION     XM_071830292.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1479
                     /gene="LOC139840068"
                     /note="AP2/ERF and B3 domain-containing transcription
                     repressor TEM1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 21 Proteins"
                     /db_xref="GeneID:139840068"
     CDS             104..1129
                     /gene="LOC139840068"
                     /codon_start=1
                     /product="AP2/ERF and B3 domain-containing transcription
                     repressor TEM1-like"
                     /protein_id="XP_071686393.1"
                     /db_xref="GeneID:139840068"
                     /translation="MDCSTDDQSTTTETISTVAAPVTTPPLIGSNGSVVIDVDGGLEA
                     ESRKLPSSRYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHEAAKAYDTAVQRFRGRD
                     SVTNFKPLPVDTEEAGLEASFLNSHSKAEIVDMLRKHTYNDEFEQSKRNFSLKKCPLS
                     DGFIRSGHGQQLVNAREPLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQSGTTSKGVL
                     LHFEDVGMKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGPDKQLY
                     IEWKTRTGLGESNPKPVQPVQMFRLFGVNIFGSTSDGSCNGKRSNVELELLGVGSCKK
                     QRIIDPL"
     misc_feature    260..442
                     /gene="LOC139840068"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(266..271,275..277,281..283,287..289,293..295,
                     305..307,311..313,326..328,332..334,341..343)
                     /gene="LOC139840068"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     misc_feature    641..940
                     /gene="LOC139840068"
                     /note="B3 DNA binding domain; Region: B3; pfam02362"
                     /db_xref="CDD:396783"
     misc_feature    order(647..649,656..658,680..682,689..691,695..697,
                     797..799,830..832,836..841,845..850)
                     /gene="LOC139840068"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:197383"
     polyA_site      1479
                     /gene="LOC139840068"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttgtaccact tcataaacat catatttcta tttctctctc acttaaaaaa ataaaaaacc
       61 ttattctcat ttcaatttat ttctcttgtt cttgcaaatt aaaatggatt gtagcacaga
      121 tgatcaaagt acaactactg aaacaatttc aaccgttgca gcaccagtca caacgccgcc
      181 gttaatagga agtaacggca gcgttgtgat cgacgttgac ggcggtttag aagctgagtc
      241 aagaaagtta ccgtcatcac gttacaaagg tgtggtccca caaccaaacg gtcgttgggg
      301 tgctcaaatt tacgaaaaac atcaacgcgt gtggctcgga acatttaacg aagaacacga
      361 agctgcgaaa gcgtatgata ctgccgtaca acgctttcgc ggtcgtgatt ccgttactaa
      421 ttttaaaccg cttccggttg ataccgaaga agccggttta gaagcgagtt tcttaaactc
      481 gcattcgaaa gcggaaattg ttgatatgtt gagaaaacat acgtataatg acgagtttga
      541 gcaaagcaaa aggaatttta gtttaaaaaa gtgtccattg agtgacggtt ttattagatc
      601 tggccatggt caacagttag tcaacgcgcg tgaaccgctt tttgagaaaa ccgttacgcc
      661 gagtgacgtg ggaaaattaa accggttggt gatacctaaa caacatgcgg agaaacattt
      721 tccgttacaa agtggaacta cttcaaaagg tgttctttta cattttgaag atgttggtat
      781 gaaagtatgg cgatttcgtt attcgtattg gaatagtagc caaagttatg tgttgactaa
      841 aggttggagc cggtttgtta aggaaaagaa tttaaaagcc ggtgacattg tgagttttca
      901 gaggtcaacc ggaccggata agcagcttta tatagaatgg aagacgagga ccgggttagg
      961 tgagtcaaac cctaaaccgg ttcaaccggt tcagatgttt agactgtttg gagtgaatat
     1021 atttggtagt acaagtgatg gtagttgtaa tgggaagaga agtaacgtag aattggagtt
     1081 gttgggggta gggagttgta agaaacaaag aattattgac cctttgtaac aagcttctaa
     1141 tacttcaggg gttggtttga aaatattttg gattattaac tttttttttc tttctttctt
     1201 gagatgatga taatgatgat ggtgaatgaa gtggaaagtg gtgggaatgg aatagagaag
     1261 gttgcaagtt gcaaaagatt tgtatatttg ttttttagga atttaaaaga tagttgagct
     1321 aaagaaagct caatattgta gggttcaagt tgagtagtgt tgtaaaaata acaaaaaata
     1381 taaacttttc ttttctcaaa ttggtctttg attaatcttt atttattatc ctattgtagt
     1441 taaccatata taagtctatt taatgttgat cttattata
//
LOCUS       XR_011757216            1228 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840069), transcript variant X1, ncRNA.
ACCESSION   XR_011757216
VERSION     XR_011757216.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1228
                     /gene="LOC139840069"
                     /note="uncharacterized LOC139840069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840069"
     ncRNA           1..1228
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840069"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840069"
ORIGIN      
        1 tttatgtaaa gaagatgata tgtgtgtaga tgaagttgaa aacaagaagg atgatgttaa
       61 aagagtgctt cgctaaaata tttgaaagtt attgaagcac accaagtgtt tgataaaatg
      121 tcaacttggt gatgaattgg tgattttcga ctaatttata aagtgtatgc aaatttggta
      181 agattatgtg tttgctacat aaagatgatg gtatggtaaa tttgtaaaga tgatgatgtt
      241 gagtcaaata aaggaaactt ggaagttcat gttaaattga tgttatggtg ttgaaggaaa
      301 ttaatgtctt tgttgaaggt agaatttatc ctagtaatta ggttctaagt gtgatgttat
      361 gatttgtggt ggttgtcttt caaccacaat tagtatatgt gatgacaata tcattgatag
      421 cgtgaatgtg atgttatgta taggtagagg attgatagaa gcacttgaga aaatttcatt
      481 ctctttgcga taaacctcaa gggtcgtgcc atacttttga gtgacagtcc ttttgatcct
      541 tatgaataca atggcaaact cttcattcct gcccaggtta aatgaactta aggtttggca
      601 tcttctgatt taggaattga tgcacgggtc gtcttctatt accaccgaac aatcagcaac
      661 taccatctga ggcgtgtgtt cgtcttcaac atgaaggttg tttgcaactg aaaaccgcac
      721 ccacgactcg acaaaaggga acatctcagc attatgttca ctgatgttat cagtcaatag
      781 aagcgtaagt acaaacatat tttaaatgaa gaaaatccct catgcttaga acaacatatt
      841 agttattgca gttatccgtt cctattggtg aagatagtgg agtttctaat ctggatggga
      901 cgataagctg gacggattcg agggcggccc cctgggctag ccgctgccat cggcgcccag
      961 gagggcggcg gcctgggcgg ggtggtggac gcaaacgttg ggagtgctct tatgttccac
     1021 aactaagaaa tgttatatgg cgcaataaaa aatatggtga tatatagttg tatgtataaa
     1081 tgttaacaag ttaatgtttg gacaccaaaa ccctttattt tgggttgagg atcactgaaa
     1141 catcatcatt tactcactgc atattcacac aggtacacac caagcagcca ggtcaaaaaa
     1201 gggactacaa gatcagccat cagctcat
//
LOCUS       XR_011757217             959 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840069), transcript variant X2, ncRNA.
ACCESSION   XR_011757217
VERSION     XR_011757217.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..959
                     /gene="LOC139840069"
                     /note="uncharacterized LOC139840069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840069"
     ncRNA           1..959
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840069"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840069"
ORIGIN      
        1 tttatgtaaa gaagatgata tgtgtgtaga tgaagttgaa aacaagaagg atgatgttaa
       61 aagagtgctt cgctaaaata tttgaaagtt attgaagcac accaagtgtt tgataaaatg
      121 tcaacttggt gatgaattgg tgattttcga ctaatttata aagtgtatgc aaatttggta
      181 agattatgtg tttgctacat aaagatgatg gtatggtaaa tttgtaaaga tgatgatgtt
      241 gagtcaaata aaggaaactt ggaagttcat gttaaattga tgttatggtg ttgaaggaaa
      301 ttaatgtctt tgttgaaggt agaatttatc ctagtaatta ggttctaagt gtgatgttat
      361 gatttgtggt ggttgtcttt caaccacaat tagtatatgt gatgacaata tcattgatag
      421 cgtgaatgtg atgttatgta taggtagagg attgatagaa gcacttgaga aaatttcatt
      481 ctctttgcga taaacctcaa gggtcgtgcc atacttttga gtgacagtcc ttttgatcct
      541 tatgaataca atggcaaact cttcattcct gcccaggtta aatgaactta aggtttggca
      601 tcttctgatt taggaattga tgcacgggtc gtcttctatt accaccgaac aatcagcaac
      661 taccatctga ggcgtgtgtt cgtcttcaac atgaaggttg tttgcaactg aaaaccgcac
      721 ccacgactcg acaaaaggga acatctcagc attatgttca ctgatgttat cagtcaatag
      781 aagcgtaagt acaaacatat tttaaatgaa gaaaatccct catgcttaga acaacatatt
      841 agttattgca gttatccgtt cctattggtg aagatagtgg agtttctaat ctggatggta
      901 cacaccaagc agccaggtca aaaaagggac tacaagatca gccatcagct cataactac
//
LOCUS       XR_011757218             937 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840069), transcript variant X3, ncRNA.
ACCESSION   XR_011757218
VERSION     XR_011757218.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..937
                     /gene="LOC139840069"
                     /note="uncharacterized LOC139840069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840069"
     ncRNA           1..937
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840069"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840069"
ORIGIN      
        1 tgaaatgagg ctgcatagtc tccatcgcca tcgaccacca ccgtcaccat ggtctccata
       61 tccatacaga gtacatagtt tgatataatt tcttccatag tagaaccaac caaatcatca
      121 tccatgaggg tttttgcaac atacacttga gggtagagga ttgatagaag cacttgagaa
      181 aatttcattc tctttgcgat aaacctcaag ggtcgtgcca tacttttgag tgacagtcct
      241 tttgatcctt atgaatacaa tggcaaactc ttcattcctg cccaggttaa atgaacttaa
      301 ggtttggcat cttctgattt aggaattgat gcacgggtcg tcttctatta ccaccgaaca
      361 atcagcaact accatctgag gcgtgtgttc gtcttcaaca tgaaggttgt ttgcaactga
      421 aaaccgcacc cacgactcga caaaagggaa catctcagca ttatgttcac tgatgttatc
      481 agtcaataga agcgtaagta caaacatatt ttaaatgaag aaaatccctc atgcttagaa
      541 caacatatta gttattgcag ttatccgttc ctattggtga agatagtgga gtttctaatc
      601 tggatgggac gataagctgg acggattcga gggcggcccc ctgggctagc cgctgccatc
      661 ggcgcccagg agggcggcgg cctgggcggg gtggtggacg caaacgttgg gagtgctctt
      721 atgttccaca actaagaaat gttatatggc gcaataaaaa atatggtgat atatagttgt
      781 atgtataaat gttaacaagt taatgtttgg acaccaaaac cctttatttt gggttgagga
      841 tcactgaaac atcatcattt actcactgca tattcacaca ggtacacacc aagcagccag
      901 gtcaaaaaag ggactacaag atcagccatc agctcat
//
LOCUS       XM_071830293             875 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutathione S-transferase
            DHAR2-like (LOC139840070), mRNA.
ACCESSION   XM_071830293
VERSION     XM_071830293.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..875
                     /gene="LOC139840070"
                     /note="glutathione S-transferase DHAR2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139840070"
     CDS             77..721
                     /gene="LOC139840070"
                     /codon_start=1
                     /product="glutathione S-transferase DHAR2-like"
                     /protein_id="XP_071686394.1"
                     /db_xref="GeneID:139840070"
                     /translation="MAIEICVKAAAGAPDVLGDCPFCQRVVMTLEEKKVPYSTHLINL
                     ESKPEWFVEVNPEGKVPVIKIDDEKWISDSDVIVGLIEDKYPEPSLSTPPELTSVGSK
                     IFPKFVAFLKSKDENDGTEQALLDELKALDEHLKSNGPYINGDKITAVDLGLAPKLYH
                     LKVALGHFKKWTVPESLAHVHNYIKSLFSLPSFEKTKPPKEEYVIAGWAPKVNA"
     misc_feature    <83..712
                     /gene="LOC139840070"
                     /note="glutathione dehydrogenase (ascorbate); Region:
                     PLN02817"
                     /db_xref="CDD:166458"
ORIGIN      
        1 gataatcgga atttatttac tggaagcaat tatcgtatct ctttaacaaa aaaattaaaa
       61 cttttgtctc tctaaaatgg cgattgagat ctgcgtcaaa gctgctgctg gtgcacctga
      121 tgttcttgga gactgtccat tttgccaaag ggttgttatg actcttgaag agaagaaagt
      181 gccatacagt acccatctta ttaatcttga gagcaaacct gaatggtttg ttgaagtgaa
      241 cccagaaggg aaagttcctg tgataaaaat tgatgatgag aaatggatat ctgattctga
      301 tgtaattgtg ggtcttattg aagacaagta tcctgaacct tctctttcaa ctcctcctga
      361 gcttacctct gtggggtcaa agattttccc caagtttgtt gcatttttaa agagcaaaga
      421 cgagaacgat gggacggagc aagctttgct tgatgagttg aaggcgttgg atgaacatct
      481 caagagtaac gggccttata taaatggaga caaaattacg gcagttgatt tgggtttggc
      541 accaaagctc tatcacctta aggtggctct tggtcatttt aagaaatgga ctgttcctga
      601 gagtctggct catgtgcata actacataaa gtcactcttt tctctaccgt catttgagaa
      661 aaccaaacct cctaaagaag aatatgttat cgctggatgg gccccaaagg ttaacgcatg
      721 aagctgcccc aaactataat tttagtagct tatagttata ttatgaactt atcatcataa
      781 atatattatc gaacgtatgt tatgacattg accagatgtt tttaatatat ttatcattta
      841 gcagatttgt ggctggttgc taatatatat aacta
//
LOCUS       XR_011757219            1835 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840072), transcript variant X1, ncRNA.
ACCESSION   XR_011757219
VERSION     XR_011757219.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1835
                     /gene="LOC139840072"
                     /note="uncharacterized LOC139840072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840072"
     ncRNA           1..1835
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840072"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840072"
ORIGIN      
        1 caacaacata atcgcagtag tcatacacca attacggttc ttcaaatcaa tgattctctt
       61 aggtgatatc gactactgta caacggttct tcaaatcaac gattctttaa atcaacgatt
      121 catccacata caattagggt tcttcaaatc gtcattcaga tacaattagg gttcttcaat
      181 aaacgcaagt cgacgatcca acaatatgta tgtataattt ggagaaaaac ccatcaccat
      241 cggaatcagt gtttcttaat tctaacgata ttgtgggcag gatcgattca gtacgtcgaa
      301 tgctcctaac gattctgttt tgaatgtggt taccaagtgt tgtagtgggt taccaaaaaa
      361 ttgggtcctt tgattgcatt tgggttatca tcttcgttaa ggtatttggg tttactatca
      421 atttatattt tttttttaaa gaaatatgta ttagtatttt gttcttttag ctattctatt
      481 cattatttcc tttctattta ttgacttata cctgctgtta ttgatggtgt gttgtgttat
      541 tgttatgtgt atctgtaccc ttttcgattg accatcatct ccattaagtt tgaagatgtt
      601 gaactcgaaa aaagcaaaat tgatactcat taaatgcgat acttgcacaa cagcctgaaa
      661 aatacaagtt tgttcatttc acatgtcctg gaacaaccag tgaggtgcaa acacagaaag
      721 aacggtattt cccgatgcgt tcactgctac ttatgcataa gcatgatgca tttgaaaagg
      781 gctgccatga tcaacactcg agaaatgacg ccatcccgtt ggctcaataa cagccaacaa
      841 tacgtatgga atcttttaaa cttccaacaa aatatactat aaatgttcaa tattcatata
      901 acttgggagt atttttttgg cttaaaaccg tacaaaatta tacttaatgg tattcttgga
      961 atatgggagg tgcttaaagt ttgatttatg gtatatgatg gttagaaaaa tgaagttttt
     1021 caaatggatg tttatttctc aaaaagttga ccagagtgga cttttagtca aaactgcagg
     1081 tttagggttg catgattctt tatggttaag gattatttgg gattatgaag ggtgcataaa
     1141 ttttggatta tggtgtaaga tgataagtaa aaggcaggat tttcaaagga tcctaaaatc
     1201 acaaattgtt gaccaggtca gacctccagt caaagttgca ggtctaatgg gttgcaataa
     1261 ggattttatt gatgatatta ttttacttat ggtaatggat gattccacta ttttttgtct
     1321 tgaacatgag tgcaaaagtg gagttttaaa acctactaga gaaaattttg gacaccttag
     1381 ggttttatca cagcctggat tcccattgtc aaattttaaa gacttttggt tagtgaatta
     1441 tggtattttc aatatggttc agcaataggc aaggttgtgg agatttaaga ggggtttggg
     1501 cactaatttt gatggtaatg ctagcagaat gttaaggttt tggactgaca tgaagtggtt
     1561 ctcaaaggat gcagactcag atggtgattt tatggtttta aggactgcag ggattgaccg
     1621 tgtaatttta ttgcggtttc agaagttatg cagagcaagt cctatgcagt ttaaaatctt
     1681 ttgcaatccc agtccttcgt ttgttatctt tatttggcaa tttgactttg ttagtccttg
     1741 ggatgtacac taaaaactat aggctaggtt tctttttgtc atctttttgg catttgtgca
     1801 agtgttttgg ggatcactaa aatctccact cattt
//
LOCUS       XR_011757220            1804 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840072), transcript variant X2, ncRNA.
ACCESSION   XR_011757220
VERSION     XR_011757220.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1804
                     /gene="LOC139840072"
                     /note="uncharacterized LOC139840072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840072"
     ncRNA           1..1804
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840072"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840072"
ORIGIN      
        1 caacaacata atcgcagtag tcatacacca attacggttc ttcaaatcaa tgattctctt
       61 aggtgatatc gactactgta caacggttct tcaaatcaac gattctttaa atcaacgatt
      121 catccacata caattagggt tcttcaaatc gtcattcaga tacaattagg gttcttcaat
      181 aaacgcaagt cgacgatcca acaatatgta tgtataattt ggagaaaaac ccatcaccat
      241 cggaatcagg atcgattcag tacgtcgaat gctcctaacg attctgtttt gaatgtggtt
      301 accaagtgtt gtagtgggtt accaaaaaat tgggtccttt gattgcattt gggttatcat
      361 cttcgttaag gtatttgggt ttactatcaa tttatatttt ttttttaaag aaatatgtat
      421 tagtattttg ttcttttagc tattctattc attatttcct ttctatttat tgacttatac
      481 ctgctgttat tgatggtgtg ttgtgttatt gttatgtgta tctgtaccct tttcgattga
      541 ccatcatctc cattaagttt gaagatgttg aactcgaaaa aagcaaaatt gatactcatt
      601 aaatgcgata cttgcacaac agcctgaaaa atacaagttt gttcatttca catgtcctgg
      661 aacaaccagt gaggtgcaaa cacagaaaga acggtatttc ccgatgcgtt cactgctact
      721 tatgcataag catgatgcat ttgaaaaggg ctgccatgat caacactcga gaaatgacgc
      781 catcccgttg gctcaataac agccaacaat acgtatggaa tcttttaaac ttccaacaaa
      841 atatactata aatgttcaat attcatataa cttgggagta tttttttggc ttaaaaccgt
      901 acaaaattat acttaatggt attcttggaa tatgggaggt gcttaaagtt tgatttatgg
      961 tatatgatgg ttagaaaaat gaagtttttc aaatggatgt ttatttctca aaaagttgac
     1021 cagagtggac ttttagtcaa aactgcaggt ttagggttgc atgattcttt atggttaagg
     1081 attatttggg attatgaagg gtgcataaat tttggattat ggtgtaagat gataagtaaa
     1141 aggcaggatt ttcaaaggat cctaaaatca caaattgttg accaggtcag acctccagtc
     1201 aaagttgcag gtctaatggg ttgcaataag gattttattg atgatattat tttacttatg
     1261 gtaatggatg attccactat tttttgtctt gaacatgagt gcaaaagtgg agttttaaaa
     1321 cctactagag aaaattttgg acaccttagg gttttatcac agcctggatt cccattgtca
     1381 aattttaaag acttttggtt agtgaattat ggtattttca atatggttca gcaataggca
     1441 aggttgtgga gatttaagag gggtttgggc actaattttg atggtaatgc tagcagaatg
     1501 ttaaggtttt ggactgacat gaagtggttc tcaaaggatg cagactcaga tggtgatttt
     1561 atggttttaa ggactgcagg gattgaccgt gtaattttat tgcggtttca gaagttatgc
     1621 agagcaagtc ctatgcagtt taaaatcttt tgcaatccca gtccttcgtt tgttatcttt
     1681 atttggcaat ttgactttgt tagtccttgg gatgtacact aaaaactata ggctaggttt
     1741 ctttttgtca tctttttggc atttgtgcaa gtgttttggg gatcactaaa atctccactc
     1801 attt
//
LOCUS       XR_011757221            2172 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840072), transcript variant X3, ncRNA.
ACCESSION   XR_011757221
VERSION     XR_011757221.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2172
                     /gene="LOC139840072"
                     /note="uncharacterized LOC139840072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840072"
     ncRNA           1..2172
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840072"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840072"
ORIGIN      
        1 caacaacata atcgcagtag tcatacacca attacggttc ttcaaatcaa tgattctctt
       61 aggtgatatc gactactgta caacggttct tcaaatcaac gattctttaa atcaacgatt
      121 catccacata caattagggt tcttcaaatc gtcattcaga tacaattagg gttcttcaat
      181 aaacgcaagt cgacgatcca acaatatgta tgtataattt ggagaaaaac ccatcaccat
      241 cggaatcagg gggaagaagc gatagttcag agaaataatg aggtttctga aaaaatatgt
      301 caggttttct ctcttattta gggttttttt tgttgtattt ttaattagaa acatagattt
      361 atcagagatg tttcatatat gatttctctc ttattttgga gtacgaatca taccattgaa
      421 atgatttcgg tttctaaaca agttgtttat cagaggtgtt tcatatatgc cggattctaa
      481 taattggttt tgtttcccag gaaaaggatt aagatcattc aattagggtt ttgtttttaa
      541 taatttcttt gtgttctatt atatgttgca gttgttggta aattggttgt gcctaaaaca
      601 aaaaaattgg tgaccaggat cgattcagta cgtcgaatgc tcctaacgat tctgttttga
      661 atgtggttac caagtgttgt agtgggttac caaaaaattg ggtcctttga ttgcatttgg
      721 gttatcatct tcgttaaggt atttgggttt actatcaatt tatatttttt ttttaaagaa
      781 atatgtatta gtattttgtt cttttagcta ttctattcat tatttccttt ctatttattg
      841 acttatacct gctgttattg atggtgtgtt gtgttattgt tatgtgtatc tgtacccttt
      901 tcgattgacc atcatctcca ttaagtttga agatgttgaa ctcgaaaaaa gcaaaattga
      961 tactcattaa atgcgatact tgcacaacag cctgaaaaat acaagtttgt tcatttcaca
     1021 tgtcctggaa caaccagtga ggtgcaaaca cagaaagaac ggtatttccc gatgcgttca
     1081 ctgctactta tgcataagca tgatgcattt gaaaagggct gccatgatca acactcgaga
     1141 aatgacgcca tcccgttggc tcaataacag ccaacaatac gtatggaatc ttttaaactt
     1201 ccaacaaaat atactataaa tgttcaatat tcatataact tgggagtatt tttttggctt
     1261 aaaaccgtac aaaattatac ttaatggtat tcttggaata tgggaggtgc ttaaagtttg
     1321 atttatggta tatgatggtt agaaaaatga agtttttcaa atggatgttt atttctcaaa
     1381 aagttgacca gagtggactt ttagtcaaaa ctgcaggttt agggttgcat gattctttat
     1441 ggttaaggat tatttgggat tatgaagggt gcataaattt tggattatgg tgtaagatga
     1501 taagtaaaag gcaggatttt caaaggatcc taaaatcaca aattgttgac caggtcagac
     1561 ctccagtcaa agttgcaggt ctaatgggtt gcaataagga ttttattgat gatattattt
     1621 tacttatggt aatggatgat tccactattt tttgtcttga acatgagtgc aaaagtggag
     1681 ttttaaaacc tactagagaa aattttggac accttagggt tttatcacag cctggattcc
     1741 cattgtcaaa ttttaaagac ttttggttag tgaattatgg tattttcaat atggttcagc
     1801 aataggcaag gttgtggaga tttaagaggg gtttgggcac taattttgat ggtaatgcta
     1861 gcagaatgtt aaggttttgg actgacatga agtggttctc aaaggatgca gactcagatg
     1921 gtgattttat ggttttaagg actgcaggga ttgaccgtgt aattttattg cggtttcaga
     1981 agttatgcag agcaagtcct atgcagttta aaatcttttg caatcccagt ccttcgtttg
     2041 ttatctttat ttggcaattt gactttgtta gtccttggga tgtacactaa aaactatagg
     2101 ctaggtttct ttttgtcatc tttttggcat ttgtgcaagt gttttgggga tcactaaaat
     2161 ctccactcat tt
//
LOCUS       XR_011757222            1216 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840072), transcript variant X4, ncRNA.
ACCESSION   XR_011757222
VERSION     XR_011757222.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1216
                     /gene="LOC139840072"
                     /note="uncharacterized LOC139840072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840072"
     ncRNA           1..1216
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840072"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840072"
ORIGIN      
        1 caacaacata atcgcagtag tcatacacca attacggttc ttcaaatcaa tgattctctt
       61 aggtgatatc gactactgta caacggttct tcaaatcaac gattctttaa atcaacgatt
      121 catccacata caattagggt tcttcaaatc gtcattcaga tacaattagg gttcttcaat
      181 aaacgcaagt cgacgatcca acaatatgta tgtataattt ggagaaaaac ccatcaccat
      241 cggaatcagt gtttcttaat tctaacgata ttgtgggcag gatcgattca gtacgtcgaa
      301 tgctcctaac gattctgttt tgaatgtggt taccaagtgt tgtagtgggt taccaaaaaa
      361 ttgggtcctt tgattgcatt tgggttatca tcttcgttaa ggtatttggg tttactatca
      421 atttatattt tttttttaaa gaaatatgta ttagtatttt gttcttttag ctattctatt
      481 cattatttcc tttctattta ttgacttata cctgctgtta ttgatggtgt gttgtgttat
      541 tgttatgtgt atctgtaccc ttttcgattg accatcatct ccattaagtt tgaagatgtt
      601 gaactcgaaa aaagcaaaat tgatactcat taaatgcgat acttgcacaa cagcctgaaa
      661 aatacaagtt tgttcatttc acatgtcctg gaacaaccag tgaggtgcaa acacagaaag
      721 aacggtattt cccgatgcgt tcactgctac ttatgcataa gcatgatgca tttgaaaagg
      781 gctgccatga tcaacactcg agaaatgacg ccatcccgtt ggctcaataa cagccaacaa
      841 taccaatagg caaggttgtg gagatttaag aggggtttgg gcactaattt tgatggtaat
      901 gctagcagaa tgttaaggtt ttggactgac atgaagtggt tctcaaagga tgcagactca
      961 gatggtgatt ttatggtttt aaggactgca gggattgacc gtgtaatttt attgcggttt
     1021 cagaagttat gcagagcaag tcctatgcag tttaaaatct tttgcaatcc cagtccttcg
     1081 tttgttatct ttatttggca atttgacttt gttagtcctt gggatgtaca ctaaaaacta
     1141 taggctaggt ttctttttgt catctttttg gcatttgtgc aagtgttttg gggatcacta
     1201 aaatctccac tcattt
//
LOCUS       XR_011757223            1648 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840072), transcript variant X5, ncRNA.
ACCESSION   XR_011757223
VERSION     XR_011757223.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1648
                     /gene="LOC139840072"
                     /note="uncharacterized LOC139840072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840072"
     ncRNA           1..1648
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840072"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840072"
ORIGIN      
        1 caacaacata atcgcagtag tcatacacca attacggttc ttcaaatcaa tgattctctt
       61 aggtgatatc gactactgta caacggttct tcaaatcaac gattctttaa atcaacgatt
      121 catccacata caattagggt tcttcaaatc gtcattcaga tacaattagg gttcttcaat
      181 aaacgcaagt cgacgatcca acaatatgta tgtataattt ggagaaaaac ccatcaccat
      241 cggaatcagt gtttcttaat tctaacgata ttgtgggcag gatcgattca gtacgtcgaa
      301 tgctcctaac gattctgttt tgaatgtggt taccaagtgt tgtagtgggt taccaaaaaa
      361 ttgggtcctt tgattgcatt tgggttatca tcttcgttaa gtttgaagat gttgaactcg
      421 aaaaaagcaa aattgatact cattaaatgc gatacttgca caacagcctg aaaaatacaa
      481 gtttgttcat ttcacatgtc ctggaacaac cagtgaggtg caaacacaga aagaacggta
      541 tttcccgatg cgttcactgc tacttatgca taagcatgat gcatttgaaa agggctgcca
      601 tgatcaacac tcgagaaatg acgccatccc gttggctcaa taacagccaa caatacgtat
      661 ggaatctttt aaacttccaa caaaatatac tataaatgtt caatattcat ataacttggg
      721 agtatttttt tggcttaaaa ccgtacaaaa ttatacttaa tggtattctt ggaatatggg
      781 aggtgcttaa agtttgattt atggtatatg atggttagaa aaatgaagtt tttcaaatgg
      841 atgtttattt ctcaaaaagt tgaccagagt ggacttttag tcaaaactgc aggtttaggg
      901 ttgcatgatt ctttatggtt aaggattatt tgggattatg aagggtgcat aaattttgga
      961 ttatggtgta agatgataag taaaaggcag gattttcaaa ggatcctaaa atcacaaatt
     1021 gttgaccagg tcagacctcc agtcaaagtt gcaggtctaa tgggttgcaa taaggatttt
     1081 attgatgata ttattttact tatggtaatg gatgattcca ctattttttg tcttgaacat
     1141 gagtgcaaaa gtggagtttt aaaacctact agagaaaatt ttggacacct tagggtttta
     1201 tcacagcctg gattcccatt gtcaaatttt aaagactttt ggttagtgaa ttatggtatt
     1261 ttcaatatgg ttcagcaata ggcaaggttg tggagattta agaggggttt gggcactaat
     1321 tttgatggta atgctagcag aatgttaagg ttttggactg acatgaagtg gttctcaaag
     1381 gatgcagact cagatggtga ttttatggtt ttaaggactg cagggattga ccgtgtaatt
     1441 ttattgcggt ttcagaagtt atgcagagca agtcctatgc agtttaaaat cttttgcaat
     1501 cccagtcctt cgtttgttat ctttatttgg caatttgact ttgttagtcc ttgggatgta
     1561 cactaaaaac tataggctag gtttcttttt gtcatctttt tggcatttgt gcaagtgttt
     1621 tggggatcac taaaatctcc actcattt
//
LOCUS       XR_011757224            1850 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840072), transcript variant X6, ncRNA.
ACCESSION   XR_011757224
VERSION     XR_011757224.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1850
                     /gene="LOC139840072"
                     /note="uncharacterized LOC139840072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840072"
     ncRNA           1..1850
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840072"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139840072"
ORIGIN      
        1 caacaacata atcgcagtag tcatacacca attacggttc ttcaaatcaa tgattctctt
       61 aggtgatatc gactactgta caacggttct tcaaatcaac gattctttaa atcaacgatt
      121 catccacata caattagggt tcttcaaatc gtcattcaga tacaattagg gttcttcaat
      181 aaacgcaagt cgacgatcca acaatatgta tgtataattt ggagaaaaac ccatcaccat
      241 cggaatcagt tgttggtaaa ttggttgtgc ctaaaacaaa aaaattggtg accaggatcg
      301 attcagtacg tcgaatgctc ctaacgattc tgttttgaat gtggttacca agtgttgtag
      361 tgggttacca aaaaattggg tcctttgatt gcatttgggt tatcatcttc gttaaggtat
      421 ttgggtttac tatcaattta tatttttttt ttaaagaaat atgtattagt attttgttct
      481 tttagctatt ctattcatta tttcctttct atttattgac ttatacctgc tgttattgat
      541 ggtgtgttgt gttattgtta tgtgtatctg tacccttttc gattgaccat catctccatt
      601 aagtttgaag atgttgaact cgaaaaaagc aaaattgata ctcattaaat gcgatacttg
      661 cacaacagcc tgaaaaatac aagtttgttc atttcacatg tcctggaaca accagtgagg
      721 tgcaaacaca gaaagaacgg tatttcccga tgcgttcact gctacttatg cataagcatg
      781 atgcatttga aaagggctgc catgatcaac actcgagaaa tgacgccatc ccgttggctc
      841 aataacagcc aacaatacgt atggaatctt ttaaacttcc aacaaaatat actataaatg
      901 ttcaatattc atataacttg ggagtatttt tttggcttaa aaccgtacaa aattatactt
      961 aatggtattc ttggaatatg ggaggtgctt aaagtttgat ttatggtata tgatggttag
     1021 aaaaatgaag tttttcaaat ggatgtttat ttctcaaaaa gttgaccaga gtggactttt
     1081 agtcaaaact gcaggtttag ggttgcatga ttctttatgg ttaaggatta tttgggatta
     1141 tgaagggtgc ataaattttg gattatggtg taagatgata agtaaaaggc aggattttca
     1201 aaggatccta aaatcacaaa ttgttgacca ggtcagacct ccagtcaaag ttgcaggtct
     1261 aatgggttgc aataaggatt ttattgatga tattatttta cttatggtaa tggatgattc
     1321 cactattttt tgtcttgaac atgagtgcaa aagtggagtt ttaaaaccta ctagagaaaa
     1381 ttttggacac cttagggttt tatcacagcc tggattccca ttgtcaaatt ttaaagactt
     1441 ttggttagtg aattatggta ttttcaatat ggttcagcaa taggcaaggt tgtggagatt
     1501 taagaggggt ttgggcacta attttgatgg taatgctagc agaatgttaa ggttttggac
     1561 tgacatgaag tggttctcaa aggatgcaga ctcagatggt gattttatgg ttttaaggac
     1621 tgcagggatt gaccgtgtaa ttttattgcg gtttcagaag ttatgcagag caagtcctat
     1681 gcagtttaaa atcttttgca atcccagtcc ttcgtttgtt atctttattt ggcaatttga
     1741 ctttgttagt ccttgggatg tacactaaaa actataggct aggtttcttt ttgtcatctt
     1801 tttggcattt gtgcaagtgt tttggggatc actaaaatct ccactcattt
//
LOCUS       XR_011757225            1151 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840072), transcript variant X7, ncRNA.
ACCESSION   XR_011757225
VERSION     XR_011757225.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1151
                     /gene="LOC139840072"
                     /note="uncharacterized LOC139840072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840072"
     ncRNA           1..1151
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840072"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139840072"
ORIGIN      
        1 caacaacata atcgcagtag tcatacacca attacggttc ttcaaatcaa tgattctctt
       61 aggtgatatc gactactgta caacggttct tcaaatcaac gattctttaa atcaacgatt
      121 catccacata caattagggt tcttcaaatc gtcattcaga tacaattagg gttcttcaat
      181 aaacgcaagt cgacgatcca acaatatgta tgtataattt ggagaaaaac ccatcaccat
      241 cggaatcagt gtttcttaat tctaacgata ttgtgggcag gatcgattca gtacgtcgaa
      301 tgctcctaac gattctgttt tgaatgtggt taccaagtgt tgtagtgggt taccaaaaaa
      361 ttgggtcctt tgattgcatt tgggttatca tcttcgttaa ggtatttggg tttactatca
      421 atttatattt tttttttaaa gaaatatgta ttagtatttt gttcttttag ctattctatt
      481 cattatttcc tttctattta ttgacttata cctgctgtta ttgatggtgt gttgtgttat
      541 tgttatgtgt atctgtaccc ttttcgattg accatcatct ccattaagtt tgaagatgtt
      601 gaactcgaaa aaagcaaaat tgatactcat taaatgcgat acttgcacaa cagcctgaaa
      661 aatacaagtt tgttcatttc acatgtcctg gaacaaccag tgaggtgcaa acacagaaag
      721 aacggtattt cccgatgcgt tcactgctac ttatgcataa gcatgatgca tttgaaaagg
      781 gctgccatga tcaacactcg agaaatgacg ccatcccgtt ggctcaataa cagccaacaa
      841 tacaatgtta aggttttgga ctgacatgaa gtggttctca aaggatgcag actcagatgg
      901 tgattttatg gttttaagga ctgcagggat tgaccgtgta attttattgc ggtttcagaa
      961 gttatgcaga gcaagtccta tgcagtttaa aatcttttgc aatcccagtc cttcgtttgt
     1021 tatctttatt tggcaatttg actttgttag tccttgggat gtacactaaa aactataggc
     1081 taggtttctt tttgtcatct ttttggcatt tgtgcaagtg ttttggggat cactaaaatc
     1141 tccactcatt t
//
LOCUS       XR_011757226            1793 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840072), transcript variant X8, ncRNA.
ACCESSION   XR_011757226
VERSION     XR_011757226.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1793
                     /gene="LOC139840072"
                     /note="uncharacterized LOC139840072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840072"
     ncRNA           1..1793
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840072"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139840072"
ORIGIN      
        1 caacaacata atcgcagtag tcatacacca attacggttc ttcaaatcaa tgattctctt
       61 aggtgatatc gactactgta caacggttct tcaaatcaac gattctttaa atcaacgatt
      121 catccacata caattagggt tcttcaaatc gtcattcaga tacaattagg gttcttcaat
      181 aaacgcaagt cgacgatcca acaatatgta tgtataattt ggagaaaaac ccatcaccat
      241 cggaatcagt acgtcgaatg ctcctaacga ttctgttttg aatgtggtta ccaagtgttg
      301 tagtgggtta ccaaaaaatt gggtcctttg attgcatttg ggttatcatc ttcgttaagg
      361 tatttgggtt tactatcaat ttatattttt tttttaaaga aatatgtatt agtattttgt
      421 tcttttagct attctattca ttatttcctt tctatttatt gacttatacc tgctgttatt
      481 gatggtgtgt tgtgttattg ttatgtgtat ctgtaccctt ttcgattgac catcatctcc
      541 attaagtttg aagatgttga actcgaaaaa agcaaaattg atactcatta aatgcgatac
      601 ttgcacaaca gcctgaaaaa tacaagtttg ttcatttcac atgtcctgga acaaccagtg
      661 aggtgcaaac acagaaagaa cggtatttcc cgatgcgttc actgctactt atgcataagc
      721 atgatgcatt tgaaaagggc tgccatgatc aacactcgag aaatgacgcc atcccgttgg
      781 ctcaataaca gccaacaata cgtatggaat cttttaaact tccaacaaaa tatactataa
      841 atgttcaata ttcatataac ttgggagtat ttttttggct taaaaccgta caaaattata
      901 cttaatggta ttcttggaat atgggaggtg cttaaagttt gatttatggt atatgatggt
      961 tagaaaaatg aagtttttca aatggatgtt tatttctcaa aaagttgacc agagtggact
     1021 tttagtcaaa actgcaggtt tagggttgca tgattcttta tggttaagga ttatttggga
     1081 ttatgaaggg tgcataaatt ttggattatg gtgtaagatg ataagtaaaa ggcaggattt
     1141 tcaaaggatc ctaaaatcac aaattgttga ccaggtcaga cctccagtca aagttgcagg
     1201 tctaatgggt tgcaataagg attttattga tgatattatt ttacttatgg taatggatga
     1261 ttccactatt ttttgtcttg aacatgagtg caaaagtgga gttttaaaac ctactagaga
     1321 aaattttgga caccttaggg ttttatcaca gcctggattc ccattgtcaa attttaaaga
     1381 cttttggtta gtgaattatg gtattttcaa tatggttcag caataggcaa ggttgtggag
     1441 atttaagagg ggtttgggca ctaattttga tggtaatgct agcagaatgt taaggttttg
     1501 gactgacatg aagtggttct caaaggatgc agactcagat ggtgatttta tggttttaag
     1561 gactgcaggg attgaccgtg taattttatt gcggtttcag aagttatgca gagcaagtcc
     1621 tatgcagttt aaaatctttt gcaatcccag tccttcgttt gttatcttta tttggcaatt
     1681 tgactttgtt agtccttggg atgtacacta aaaactatag gctaggtttc tttttgtcat
     1741 ctttttggca tttgtgcaag tgttttgggg atcactaaaa tctccactca ttt
//
LOCUS       XM_071830295            2148 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840073), mRNA.
ACCESSION   XM_071830295
VERSION     XM_071830295.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2148
                     /gene="LOC139840073"
                     /note="uncharacterized LOC139840073; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840073"
     CDS             1..1698
                     /gene="LOC139840073"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686396.1"
                     /db_xref="GeneID:139840073"
                     /translation="MCSSSSISTIFPLHLPRRNHLFLKFSNSFPISTHETIFNPTNPR
                     KKKLISISASITKNKLELSWVPSDRNDVDDYNGWAIMEETISPKKPKKGLPALMLFGI
                     GTSFVALLAVFAHFTLSRKGYVLRINSPFHVYVDKKLLDSKELLKVGEVVNEPLIEND
                     HVEAGVTAEEVIDNVKREGKPGRVVVTVSADATQQEALLWLKNLKIVEDEIMADELCT
                     RREYARWLVLVNSRLERNPRKRIVPSVALAGSTFKAFDDVSGEDPDFEYIQALAEAGV
                     FPSKLSDVYGSQSFYPERLISREDLISWRANLEYDVMPGLNEEMLRNKIGFLDARELR
                     SDVLAVLFTDLRANDRSIMRKIFGQVKRFQPGKPCTKAQAAVALTSGRMTEYIRTEFS
                     KLEAENSSREFAMKEIKFELLERGDIKRFWEKKLADENSRFLEVEAAYLEALKDLEQQ
                     KIEKDNYVDVYLKEKAALDCQKQLLLSLKEEVEEMNEKLAYERADYVDEQHKIRSVVA
                     ELEVKYEKVLDSKSILEAELEALRILRSWIEDEAKKGQARTKVLEEAGRRWKWGGRS"
     misc_feature    763..903
                     /gene="LOC139840073"
                     /note="S-layer homology domain; Region: SLH; pfam00395"
                     /db_xref="CDD:459798"
     misc_feature    1174..>1683
                     /gene="LOC139840073"
                     /note="phosphodiesterase; Provisional; Region: PRK12704"
                     /db_xref="CDD:237177"
ORIGIN      
        1 atgtgttcat catcctcaat ttccaccatt ttcccacttc atcttcctcg tagaaatcac
       61 ctgtttctca aattctcaaa ttcatttcca atttcaaccc atgaaactat attcaaccct
      121 acaaacccta gaaaaaagaa gttaatctct atatctgctt caattacaaa aaataagctc
      181 gagttatctt gggttccttc agatcggaat gatgttgatg actataatgg ttgggcaata
      241 atggaagaaa ctatcagccc caaaaaacct aaaaaagggt tacctgcatt gatgttgttt
      301 ggtattggga cctcatttgt ggctttactt gctgtttttg ctcattttac tctatcaaga
      361 aaaggttatg ttttgcgaat taatagtccg tttcatgtgt acgttgataa aaaattgttg
      421 gattctaaag aattattgaa ggtgggtgaa gttgtcaatg agccattgat tgaaaatgat
      481 catgttgaag ctggtgtgac agctgaagaa gtaattgata atgttaagag ggaaggaaag
      541 cctggaaggg ttgttgttac ggtttctgct gatgctactc aacaagaggc tttattgtgg
      601 ttaaagaatt tgaagatcgt tgaagatgaa atcatggcag atgaattgtg tactaggaga
      661 gaatatgcaa gatggttggt tctggttaac tcacgacttg aaaggaatcc aaggaaaaga
      721 atagtcccat ctgtcgcact tgctggatct acatttaaag cttttgatga cgttagcggt
      781 gaagatcctg attttgagta cattcaagcc ctggctgagg ctggtgtttt tccgagcaag
      841 ttgtctgatg tgtacggttc acagagcttt tatcccgaga gattgatttc aagggaggat
      901 cttatttctt ggagagccaa tttagagtac gacgtaatgc cgggactaaa tgaagagatg
      961 ttaagaaaca aaataggttt tctggatgca agggagctca ggtcagatgt attggcggtg
     1021 ctttttacgg acttgcgagc taatgataga agcataatga gaaaaatttt tggtcaggta
     1081 aagcggtttc agcccgggaa accatgcacc aaggcacaag ctgcagtggc actcacgagt
     1141 ggtagaatga ccgaatatat tcgcaccgag ttttcaaagc tagaagctga gaattcttca
     1201 agggagtttg caatgaaaga gatcaaattc gaacttcttg aaagaggcga cataaagagg
     1261 ttttgggaga aaaaactagc ggatgaaaat agtcgttttc tggaggttga agcggcttat
     1321 cttgaagcgc ttaaagattt ggaacagcaa aagattgaaa aagataatta tgttgatgtt
     1381 tatttgaagg aaaaagcagc tttagactgt caaaaacagt tacttttaag cttgaaggaa
     1441 gaagtagaag aaatgaacga aaaacttgcg tacgaacgag ctgactatgt agacgagcaa
     1501 cataaaatcc gtagtgttgt cgctgaatta gaagtcaagt atgaaaaagt tcttgattca
     1561 aagtcaatac tcgaagctga attagaagcc cttcgtatac ttagatcatg gatagaagac
     1621 gaagctaaaa agggtcaagc tcggactaag gttcttgagg aagctgggcg aaggtggaaa
     1681 tggggtggtc gttcttgaga tggtcttttt gaaatcgcat tgttagattg atttgttgtt
     1741 gatacgtaaa aagtaatatg atttgttctg aaattgtaca caacaaagat gttcaagatt
     1801 gtgcctgtta tcgggaacta tattgtaatc aatattggaa gagcgagatg cgatcaaggc
     1861 ggcaattggt ggtgctatgg tggttattta cttatttaca ttatttttat taaactcttg
     1921 tgggaatttg tgtattcaga ggaatgtagg gcataaacat gacagattag ctgttgatgt
     1981 accaaacatg gcacaattgt ctgaatgtag ggcaagttta actttggtat ggttagattt
     2041 ggctacttga tgaagcttaa tgagatgttt attgagccaa ctcactgcaa tttaaacact
     2101 aacttgagtc ttgtcagatt ttgagttggt ttatttatac caattttt
//
LOCUS       XR_011757227            1205 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840074), transcript variant X1, ncRNA.
ACCESSION   XR_011757227
VERSION     XR_011757227.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1205
                     /gene="LOC139840074"
                     /note="uncharacterized LOC139840074; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840074"
     ncRNA           1..1205
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840074"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840074"
ORIGIN      
        1 gtgtatgttg aaaatgataa ttatgaaaat gataagctga ttataatatt gataatgatc
       61 aagtgtttat aatatgtagt tacaattttg aaaaaaaact tttatttttg taatgataaa
      121 tgtttataat gttgataata atagttacaa tcattatcaa cacaaattta ttaaaaaatg
      181 tatgtttgat atgatcatat ttaatattat ataggttcag ctaagatcag tttgcattaa
      241 tagggtttta taccgttaag aattcaacaa caatatagtg gaagctgatc tgtgcaagat
      301 caacattttc aggttgaagg ggaaaataaa gctaggatcc tcacagttgc agttagttaa
      361 ttctatttct acaaaaaggt agtcagttga tttgaaatgc aaagcatcat ctgccactta
      421 tttttgttgg agagtggatc gatgatacag aacaagcaaa tgtttcacat aatctgtgag
      481 ctacccgata tagttgatag aaaactggtt ccacgaatga cggttgtaaa ggaagtggac
      541 atttcattaa ttacttaact cctcccagaa ttttaagttc tttggtcaca acatggttaa
      601 gacggggacg atggtttgat gacaagggaa gagcactata tgcagcagaa gtcaatacac
      661 taagtaactg ggcagagagc tgaaaaataa catccattgg ttacatattt aggtggttga
      721 agcagtacaa tctgttaaga tgacaaatgt gcgggggaaa tctaatatcc agaatgaagg
      781 gaattaatat ctttaaagcc cttggaaaaa gtgctaaaga aagctacatg atgaaaggtt
      841 atgctcttaa taccgggctt gcagcacaag gaatgccaat gaggtttctc ctgcaaggat
      901 cgtaagtctc gactttaatc ttcaaaatac aaaaatgcaa ttgggggttc aggttttagt
      961 gactaaccct ctggagttag aaaagttccg tcaaaggtaa ggttgggtgt tctttgagaa
     1021 ttgagaatga gaataagact tgtgttataa taaccgtgtg tcttctttaa tattattaac
     1081 aactttgatc atttcaaatg cttgtgtgat ctaataccca agagactaca tcaagatctt
     1141 attggtcgat gacactcaaa ataatctgtt cttaatatat aacttcctgt atattaattt
     1201 taatt
//
LOCUS       XR_011757228            1299 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840074), transcript variant X2, ncRNA.
ACCESSION   XR_011757228
VERSION     XR_011757228.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1299
                     /gene="LOC139840074"
                     /note="uncharacterized LOC139840074; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840074"
     ncRNA           1..1299
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840074"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840074"
ORIGIN      
        1 caatccatta cttccatcca cgcaatactc cattcgcatg aaccctaatt tcaattttga
       61 aacaacatag aaatctctct tcaagaacag gcatcctcca aaacctactc acaatcgttt
      121 cgtctatcaa ttggcaaaga tcaaattttc cggaacatgt gcaatgcggt gaagtccatt
      181 ttattgttaa ctgaaatcaa tcttagaaga cacacgaaaa aattgcggcc ttcaattgga
      241 tgttttcata aaaccatatt aatattctgt aattactgat catttgttca ggtttgttta
      301 gacgatgaca tgatccttct aggcgtgttc catatctgta caggtagcaa caattttaaa
      361 cgtgaattta tgtatcgaac atgttgcctt gaacatgtta acagaggttg aaggggaaaa
      421 taaagctagg atcctcacag ttgcagttag ttaattctat ttctacaaaa aggtagtcag
      481 ttgatttgaa atgcaaagca tcatctgcca cttatttttg ttggagagtg gatcgatgat
      541 acagaacaag caaatgtttc acataatctg tgagctaccc gatatagttg atagaaaact
      601 ggttccacga atgacggttg taaaggaagt ggacatttca ttaattactt aactcctccc
      661 agaattttaa gttctttggt cacaacatgg ttaagacggg gacgatggtt tgatgacaag
      721 ggaagagcac tatatgcagc agaagtcaat acactaagta actgggcaga gagctgaaaa
      781 ataacatcca ttggttacat atttaggtgg ttgaagcagt acaatctgtt aagatgacaa
      841 atgtgcgggg gaaatctaat atccagaatg aagggaatta atatctttaa agcccttgga
      901 aaaagtgcta aagaaagcta catgatgaaa ggttatgctc ttaataccgg gcttgcagca
      961 caaggaatgc caatgaggtt tctcctgcaa ggatcgtaag tctcgacttt aatcttcaaa
     1021 atacaaaaat gcaattgggg gttcaggttt tagtgactaa ccctctggag ttagaaaagt
     1081 tccgtcaaag gtaaggttgg gtgttctttg agaattgaga atgagaataa gacttgtgtt
     1141 ataataaccg tgtgtcttct ttaatattat taacaacttt gatcatttca aatgcttgtg
     1201 tgatctaata cccaagagac tacatcaaga tcttattggt cgatgacact caaaataatc
     1261 tgttcttaat atataacttc ctgtatatta attttaatt
//
LOCUS       XR_011757229             854 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840075), transcript variant X1, ncRNA.
ACCESSION   XR_011757229
VERSION     XR_011757229.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..854
                     /gene="LOC139840075"
                     /note="uncharacterized LOC139840075; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840075"
     ncRNA           1..854
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840075"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840075"
ORIGIN      
        1 atttgaatta aatcgtgatc attggtatat tataacacaa caaaactaag tgctgattac
       61 ttgaaaggtg agttcttttc ttattcgtaa gttaacgtca cattttgtta cgatatacag
      121 aataaactat ccaccctaag cggccaggta cggacctgtt tattaattta tatgttagat
      181 ttgttaattg gtaagtaatc cttggtatga atgtatttgt tgtttatatg agttaaaaaa
      241 atttgttaac tggaaactta tcttcttgaa agtgaattgg tcaacaccac agcttacaaa
      301 gtttataatt tgcaagtgaa tttgtcaaaa gatgaaaaca tagagtctga acttgagtac
      361 attgatcacc agtggaaaac atcaacatgg cagccatgac ttacgaaaag ttaaatgtaa
      421 aagagaattt gtgtatgagc atgaagctgg gtgttaatga aaaagaaaca gatttggcat
      481 caaactgcaa taagttcttc atctgacaag attgacctat tcttgacgta acgatggatc
      541 atgaagatga atgagactat cagtgaggct ttattagaat ctttcatgac cgatacttct
      601 aattcaaagg tgttaagtgt gttactgaag ttaagtgtac cactaatgat gtgaagaaga
      661 ttgtggcaaa acttaatttt ggtgactggc catccaccaa tgtctttctc aagtagtcat
      721 acagttatgc taatgtaatc aaatgtttaa attgtctact tgtgatagag gtttatttat
      781 tgttaagcgt acctcttcgg tttatttata tccttccatc gttccatact ttttgaagac
      841 catgttattt atca
//
LOCUS       XR_011757230             555 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840075), transcript variant X2, ncRNA.
ACCESSION   XR_011757230
VERSION     XR_011757230.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139840075"
                     /note="uncharacterized LOC139840075; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840075"
     ncRNA           1..555
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840075"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840075"
ORIGIN      
        1 taccaaattt gaattaaatc gtgatcattg gtatattata acacaacaaa actaagtgct
       61 gattacttga aagtggaaaa catcaacatg gcagccatga cttacgaaaa gttaaatgta
      121 aaagagaatt tgtgtatgag catgaagctg ggtgttaatg aaaaagaaac agatttggca
      181 tcaaactgca ataagttctt catctgacaa gattgaccta ttcttgacgt aacgatggat
      241 catgaagatg aatgagacta tcagtgaggc tttattagaa tctttcatga ccgatacttc
      301 taattcaaag gtgttaagtg tgttactgaa gttaagtgta ccactaatga tgtgaagaag
      361 attgtggcaa aacttaattt tggtgactgg ccatccacca atgtctttct caagtagtca
      421 tacagttatg ctaatgtaat caaatgttta aattgtctac ttgtgataga ggtttattta
      481 ttgttaagcg tacctcttcg gtttatttat atccttccat cgttccatac tttttgaaga
      541 ccatgttatt tatca
//
LOCUS       XR_011757231             554 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840075), transcript variant X3, ncRNA.
ACCESSION   XR_011757231
VERSION     XR_011757231.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..554
                     /gene="LOC139840075"
                     /note="uncharacterized LOC139840075; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840075"
     ncRNA           1..554
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840075"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840075"
ORIGIN      
        1 gctgattact tgaaagtgaa tttgtcaaaa gatgaaaaca tagagtctga acttgagtac
       61 attgatcacc agtggaaaac atcaacatgg cagccatgac ttacgaaaag ttaaatgtaa
      121 aagagaattt gtgtatgagc atgaagctgg gtgttaatga aaaagaaaca gatttggcat
      181 caaactgcaa taagttcttc atctgacaag attgacctat tcttgacgta acgatggatc
      241 atgaagatga atgagactat cagtgaggct ttattagaat ctttcatgac cgatacttct
      301 aattcaaagg tgttaagtgt gttactgaag ttaagtgtac cactaatgat gtgaagaaga
      361 ttgtggcaaa acttaatttt ggtgactggc catccaccaa tgtctttctc aagtagtcat
      421 acagttatgc taatgtaatc aaatgtttaa attgtctact tgtgatagag gtttatttat
      481 tgttaagcgt acctcttcgg tttatttata tccttccatc gttccatact ttttgaagac
      541 catgttattt atca
//
LOCUS       XM_071830296            2062 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840076), mRNA.
ACCESSION   XM_071830296
VERSION     XM_071830296.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2062
                     /gene="LOC139840076"
                     /note="uncharacterized LOC139840076; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840076"
     CDS             56..1861
                     /gene="LOC139840076"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686397.1"
                     /db_xref="GeneID:139840076"
                     /translation="MFKKSIEAKAQQRLSGADRKKLKRTIKDRFPNASDSDLDILIPP
                     KVEVTVSKHPNRVLIYSLEGGLPIFFDVDSRGTTIYPTVYALWKVPHLLPAFILKGGE
                     VSRYVIGGADLMFPGIYITEEGLPEFSAGEPWAVIVPGNPAPIAVGSTCMSSTEALKA
                     GLRGKALKISHHYRDALWESAEGRYVPNAGFLDDVVFGDPSLSTNPQQSNIDGSSDQE
                     NGADNRESEMVMNGQDASFPDSSSDANVDQQITSDFGELKVTEDAQCDKGTTEDQSTL
                     SAEDVDALLDKCLLQAFYTTLKDKDLPIAGSTLWSNHVLPCRPPGTVLDIKKSSHKKL
                     AKWLQSKSSEGLISSKEDKHIKELMVLSVNRKHPDYTSFKPEKQQVEKTEQVVDPVNE
                     TDINKMMELVEIYKPSVHVNPIFTSVGADTRQLYSASEASEVVFGYVEKENLVKPTNK
                     SIVVLDAILCDALFKGAIKKGSTYPSEIHKKDLAPTFINRMQAHHQVTRGKESVVRKG
                     ALKPMQIMTERRQGNKKVTKLSGMESFLIDAEPLASELQKKFACSTSVTELPGKKGYE
                     ILVQGGVIDVLARYLVEQYGIPKKYIEVLDKTARK"
     misc_feature    59..325
                     /gene="LOC139840076"
                     /note="Pre-PUA-like domain; Region: Pre-PUA; pfam17832"
                     /db_xref="CDD:436077"
     misc_feature    329..577
                     /gene="LOC139840076"
                     /note="PUA RNA-binding domain of eukaryotic translation
                     initiation factor 2D and similar proteins; Region:
                     PUA_eIF2d-like; cd21156"
                     /db_xref="CDD:409298"
     misc_feature    order(356..358,362..364,371..373,386..391,395..397)
                     /gene="LOC139840076"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:409298"
     misc_feature    1589..1840
                     /gene="LOC139840076"
                     /note="C-terminal domain of eIF2D and related proteins;
                     Region: eIF2D_C; cd11608"
                     /db_xref="CDD:211321"
     misc_feature    order(1613..1615,1622..1627,1631..1633,1685..1687,
                     1694..1702,1706..1714,1718..1720,1763..1765,1772..1774)
                     /gene="LOC139840076"
                     /note="putative rRNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:211321"
ORIGIN      
        1 ttctcacctc tcaaacacgt aaacactttt tcgtttccaa ttaaaattaa aaaatatgtt
       61 caagaaatca attgaagcaa aagcgcagca acgattatca ggtgcagacc gcaagaaatt
      121 aaaacgtaca atcaaagatc gctttccaaa cgcttccgat tctgacctcg acattttaat
      181 tcctccgaag gtagaggtta cagtatcaaa gcatccgaac cgtgtactta tatacagttt
      241 ggaaggtgga ttgcctatct ttttcgatgt tgatagcaga ggcacaacca tatatccaac
      301 agtttatgcg ctatggaaag ttcctcacct tctaccagct ttcattttga aagggggtga
      361 ggtttcacgt tatgtgattg gaggggcaga tctaatgttc cctggcatat atatcactga
      421 agagggtctc cctgagtttt cagctggaga accatgggct gttatagttc ctggtaatcc
      481 tgctccaatt gcggtcgggt ctacctgcat gagcagcact gaggctctaa aagctggtct
      541 tcgaggaaaa gctttaaaga taagccatca ctaccgggat gcactttggg aatcagctga
      601 aggtcgatat gttcccaatg ctggctttct ggatgacgta gtatttggag atccctctct
      661 gtcaactaat cctcaacaat ctaatattga tggctctagt gatcaagaaa atggcgcaga
      721 taacagagaa tcggagatgg ttatgaatgg ccaggatgct agcttccctg attcatcttc
      781 agacgcaaat gttgaccagc aaataacttc tgattttggt gagctgaagg tgacagaaga
      841 cgctcagtgc gataagggca ctactgagga ccagagtact ctttccgctg aggatgtaga
      901 tgcactattg gacaaatgcc ttttgcaagc cttttacact actttaaagg ataaagatct
      961 tcctattgct ggcagtacat tatggtcgaa tcatgtatta ccttgtaggc caccaggcac
     1021 tgtgctggat attaagaagt cgtcacacaa aaagttggct aagtggttgc agtccaagtc
     1081 atctgaagga ttgatttcgt caaaagaaga taagcacata aaagaactca tggtcttatc
     1141 tgttaaccgc aagcatcctg attacacatc ctttaaaccc gaaaagcaac aagtcgagaa
     1201 aactgaacaa gtcgttgatc ctgttaatga aaccgatatc aacaagatga tggagcttgt
     1261 ggagatttac aaaccgagcg tacatgtaaa tccaattttc acttcggtgg gagctgatac
     1321 tcgccaactt tacagtgcat cggaagccag tgaagttgtc ttcggttatg ttgaaaaaga
     1381 aaacctggtc aaaccaacaa ataagtcaat cgtggtttta gatgcgatat tgtgtgatgc
     1441 gttattcaag ggagccatta agaaaggatc cacatacccg tcggagatac ataaaaagga
     1501 tttggcccca acgtttataa acaggatgca agcccatcac caagtgacta gaggaaaaga
     1561 atctgttgtg cgcaaaggtg ctctcaaacc gatgcagata atgactgaac gaaggcaagg
     1621 aaataagaaa gttacaaagc tttcgggaat ggaatcattt ttgatagatg ctgaaccatt
     1681 ggcttctgaa ttgcaaaaaa agtttgcttg cagtacgtct gtaacagaat tgccagggaa
     1741 gaaaggatat gagattttgg ttcaaggcgg ggtgattgat gttcttgcta gatatctcgt
     1801 tgaacaatat gggattccga agaagtacat tgaggttctc gataaaacgg ccagaaaata
     1861 agactgttac tttactggtt gaaaagtttt tggcttttaa tggtgttttc ttctttgagc
     1921 tgctagtata tagatgctat tttgtgcact ttgttaaccg tttcttctat atgatcgatc
     1981 ttatgaatat tcctgatatt aaagtcgttg atcagtatta ctttactttg taaaccgcaa
     2041 gttataacca gtgaaatcta tt
//
LOCUS       XM_071830297            1440 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides S-adenosylmethionine
            decarboxylase proenzyme-like (LOC139840077), mRNA.
ACCESSION   XM_071830297
VERSION     XM_071830297.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1440
                     /gene="LOC139840077"
                     /note="S-adenosylmethionine decarboxylase proenzyme-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 34 Proteins"
                     /db_xref="GeneID:139840077"
     CDS             151..1230
                     /gene="LOC139840077"
                     /codon_start=1
                     /product="S-adenosylmethionine decarboxylase
                     proenzyme-like"
                     /protein_id="XP_071686398.1"
                     /db_xref="GeneID:139840077"
                     /translation="MSAIGFEGYEKRLEITFFEPSIFSDPEGRGLRALSKAQLDEILN
                     PAECTIVSSLSNEHVDSYVLSESSLFVFAYKIVIKTCGTTKLLLSIPPILKLAETISL
                     TVRSVRYTRGSFIFPGAQSYPRRSFNEEVSVLDGHFEKLGLSSKAYVMGGFDKPQKWF
                     VYSASAGPVLNGDKVYTLEMCMTSLDREKASVFYKTPNSSAVTMTNDSGIQMILPKSK
                     IGDFEFDPCGYSMNAIEDGAISTIHVTPEDGFSYASFEAVGYDFNDMSLEEMVQRVLA
                     CFEPGEFSIAVGAAVSSKKLEKTCSIDVEGYNVEEKSYEELGCEGSIVYQKFVKKDGS
                     CCGSPRSVLKSGGWKGKENDEKEYE"
     misc_feature    151..1218
                     /gene="LOC139840077"
                     /note="S-adenosylmethionine decarboxylase; Region:
                     PLN02524"
                     /db_xref="CDD:215287"
     polyA_site      1440
                     /gene="LOC139840077"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cccaaattag atttcgttca cgtttctcga cgtgctttta tttaccgctt tcaaattaga
       61 taatcagata tagatatagc tattagtacc cctttttcct tcgtgttcct gttcctttct
      121 ttactggtgt taagttttct gtaaggagcc atgtctgcaa ttggttttga aggttacgag
      181 aagaggctcg aaataacgtt tttcgagccc agtatttttt ctgacccaga aggtcgaggt
      241 cttcgggctt tatcaaaagc ccaactggat gagatcttga accctgctga atgcacaatt
      301 gtatcttcac tgtcaaacga acatgtcgac tcatacgttc tatctgagtc tagtctattt
      361 gtttttgcat ataagatagt aatcaaaacc tgtgggacca ccaaattact tctttcaatc
      421 ccacccattt tgaagttagc tgaaaccatt tcgctcactg ttcgatcagt gagatacacc
      481 cgtggtagct tcatcttccc cggtgctcaa tcctacccac gccgcagctt caacgaagaa
      541 gtttccgtac tcgatggaca ttttgaaaag cttggtttga gcagcaaggc ttatgtgatg
      601 ggtgggttcg ataagcccca gaaatggttt gtttattctg cttcagcggg tcctgttttg
      661 aatggtgata aagtgtacac acttgagatg tgcatgacta gtttggaccg tgagaaagcg
      721 tctgtcttct acaaaactcc gaacagctct gctgtcacaa tgactaatga ttcaggcatt
      781 caaatgatac taccgaaatc aaaaatcggt gattttgaat ttgacccatg tgggtattca
      841 atgaacgcta ttgaagatgg tgcgatctcg accattcatg ttacccctga agacgggttc
      901 agttatgcta gttttgaagc agtcgggtat gattttaatg atatgagcct tgaggagatg
      961 gtacaacggg tgttggcttg ttttgaaccg ggggagtttt ctattgctgt tggtgctgct
     1021 gtttcatcga agaaacttga gaagacatgt tcgattgatg ttgaggggta caatgttgaa
     1081 gagaagagtt acgaagagct tggatgtgaa gggtcgattg tgtatcagaa atttgtgaag
     1141 aaggatggga gctgctgtgg gtcacctagg tcggttttga aatctggcgg ttggaaaggg
     1201 aaggagaacg atgaaaagga gtatgagtag ttattattag tatgtatcga ataagggttg
     1261 tatcgtcgtt ttttatgcct tggttacttg gattgttaaa taaaagccat ggtcatggct
     1321 atgctggatg aattgggttc ttattgtgtt attgtgtttc tgttatgatt tatgctggat
     1381 tatacctctt gatttaaagg tcttatcata aatctcatgg aaaaatcctt ttattggtca
//
LOCUS       XM_071830298            2259 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NSP-INTERACTING
            KINASE 2-like (LOC139840078), mRNA.
ACCESSION   XM_071830298
VERSION     XM_071830298.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2259
                     /gene="LOC139840078"
                     /note="protein NSP-INTERACTING KINASE 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100 Proteins"
                     /db_xref="GeneID:139840078"
     CDS             194..2065
                     /gene="LOC139840078"
                     /codon_start=1
                     /product="protein NSP-INTERACTING KINASE 2-like"
                     /protein_id="XP_071686399.1"
                     /db_xref="GeneID:139840078"
                     /translation="MNNLDIVFCCLAFLFTSCPSFANSLLSPKGVNFEVQALMNIKNG
                     FKDPHSVLNWDGDAVDPCSWTMITCSPDKLVFGLGSPSQNLSGYLSPSIVNLTNLQTV
                     LLQNNQILGPIPIELGRLPKLQTLDLSNNMFTGEIPSSLANIKSLQYLRLNNNSLTGP
                     VPQALANMTQLTFLDLSFNNLSGPVPKFMAKTFNIMGNPIICATGMEQDCKGTTPTQM
                     SLPLTTQQKSQPSVTTKTNKMALAMGTTLGCFCLLFFGFGFVFWWRRRYNQQVFFDIN
                     EQYREEVCMGNLRRFQFRELQTATKNFTSKNILGKGGFGIVYKGLLSDGTVVAVKRLK
                     DGNAVGGEIQFQTEVEMISLAVHRNLLRLYGFCMTSSERLLVYPYMSNGSVASRLKAK
                     PALDWTTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKL
                     LDHHDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSA
                     NQKGAMLDWVKKIHHESKLDMLVDKDLKSNYDRIELEEMVQVALLCTQYLPSQRPKMS
                     EVARMLEGDGLAEKWEVSQRAESNRERANEFLSSERYSDLTDDSSLLAQAMELSGPR"
     misc_feature    293..>778
                     /gene="LOC139840078"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    488..559
                     /gene="LOC139840078"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    560..631
                     /gene="LOC139840078"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    632..703
                     /gene="LOC139840078"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1118..1918
                     /gene="LOC139840078"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1118..1129,1136..1138,1142..1144,1178..1180,
                     1184..1186,1274..1276,1322..1333,1469..1471,1481..1486,
                     1490..1492,1520..1525)
                     /gene="LOC139840078"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 tccctagacc cagttgaata tggaaatcat gtgtgtgtga gttactgtat atttaatcat
       61 aaaacataac tatcacactt caacaatttt ggtgtttttt tggttattct acaccaacat
      121 cttacttttt tcataaattt catataaaca caatattcaa ccaccttgtt tgattcttcc
      181 catttgaaat tcaatgaata atcttgatat tgttttttgt tgtttggctt tcttgtttac
      241 ttcatgccct tcttttgcaa attctttgct atcccctaaa ggtgtcaact ttgaagttca
      301 agctttgatg aacataaaga atggctttaa ggatccacat agtgtattaa attgggatgg
      361 agatgctgtt gatccatgta gttggaccat gatcacttgt tccccagata aacttgtttt
      421 tggcttggga agtccaagcc aaaatctttc aggttacctt tcgccaagca tcgttaactt
      481 gacaaatctc caaacagtgc tactacagaa taaccaaatc ttagggccaa tcccaattga
      541 gcttgggagg ttacctaagc ttcaaactct tgatctttct aataacatgt tcactggtga
      601 aattccatct tctctagcca atatcaagtc cttacaatac ttgcggctaa ataacaacag
      661 tctcactgga ccagttcctc aggctttagc aaacatgacc caactcacat tcttggactt
      721 gtcctttaat aatttaagtg gtcctgttcc aaagtttatg gctaaaacat ttaatataat
      781 gggaaatcca ataatatgtg ccactgggat ggaacaagat tgcaaaggaa ctacaccaac
      841 gcaaatgtca ctccccctca caactcaaca aaagtcacaa ccatcggtca cgacaaaaac
      901 caacaaaatg gctttagcga tggggacaac ccttggatgc ttctgcttgc tgtttttcgg
      961 gtttggtttt gttttttggt ggaggagacg atacaatcag caagttttct tcgatatcaa
     1021 tgaacaatat cgagaggaag tgtgtatggg gaacttaaga agattccagt ttcgagagct
     1081 tcaaactgca acgaaaaact ttacgagcaa gaacatactt ggaaaaggtg gttttgggat
     1141 tgtatacaaa ggtttactct cagatggaac tgttgtagcc gttaagcgac taaaagatgg
     1201 gaatgcggtt ggtggtgaga tccaattcca aaccgaagtc gagatgatta gcctagcggt
     1261 tcacaggaac ctccttagac tctacggttt ttgtatgacg tcgtctgaac ggctcctagt
     1321 ttatccctat atgtccaacg ggagcgttgc ttctcgtctc aaagccaaac cggctctaga
     1381 ttggacaaca aggaagagaa ttgcattggg agcggcacgg ggtctattgt atttgcacga
     1441 acaatgtgac ccgaaaataa tccatagaga cgtcaaggct gcaaacatat tactggacga
     1501 ttactgtgag gctgtggtgg gtgatttcgg cttggctaag cttttagacc accatgattc
     1561 acacgtaaca accgctgttc gaggaaccgt tggccatata gctcccgagt atctttcaac
     1621 gggtcaatcg tctgagaaaa cagacgtttt tgggttcggg attcttctat tagaactaat
     1681 aacgggtcag agagctttag agttcggaaa atcagctaac cagaaaggtg cgatgctcga
     1741 ttgggttaag aagattcatc acgagagtaa gctcgatatg ctggtcgata aggacttgaa
     1801 aagtaactat gatcgaatcg agcttgagga gatggttcaa gtcgcgttgc tgtgtacgca
     1861 gtatctacct agccagcggc ccaaaatgtc tgaagtggct cggatgcttg aaggtgatgg
     1921 gctagccgaa aaatgggaag tgtctcaacg agctgagtcg aaccgagaac gtgcgaacga
     1981 gttcttatct tctgaacgat attcggatct taccgatgac tcttcattgc ttgcacaggc
     2041 aatggagcta tcaggacctc gttgataagt tatgaagatg atcaataaat cggatgataa
     2101 ggggtatatt tgtcattgta cataaaccga atcacaattc ggaaagtgcc tgtttgatta
     2161 tattataatg tggtttgtgt cttgaatgtt gatcttgtaa gactgaatgc tgtacagatt
     2221 ttcgtgttca ttaaaataac acaataaacc gtatcgacg
//
LOCUS       XM_071830299             839 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ESCRT-related protein CHMP1B
            (LOC139840080), mRNA.
ACCESSION   XM_071830299
VERSION     XM_071830299.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..839
                     /gene="LOC139840080"
                     /note="ESCRT-related protein CHMP1B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139840080"
     CDS             84..695
                     /gene="LOC139840080"
                     /codon_start=1
                     /product="ESCRT-related protein CHMP1B"
                     /protein_id="XP_071686400.1"
                     /db_xref="GeneID:139840080"
                     /translation="MGQAEKLMNQIMELKFTAKSLQRQARKCEKDEKSEKLKVKKAIE
                     KGNMDGARIYAENAIRKRNEQMNYLRLASRLDAVVARLDTQAKMNTISKSMGSIVKSL
                     ESTLATGNLQKMSETMDNFEKQFVNMEVQAEFMESSMAGSTSLSTPEGEVNSLMQQVA
                     DDYGLEVSVGLPQPAAHAVPTTNAEKVDEDDLSRRLAELKARG"
     misc_feature    114..602
                     /gene="LOC139840080"
                     /note="Region: Snf7; pfam03357"
                     /db_xref="CDD:460896"
     polyA_site      839
                     /gene="LOC139840080"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcctacaaaa aacgcaaatc ttacaatcta cgatcaatca ccataactgt ccatcaatca
       61 attgatagat tatacacaaa gctatggggc aagccgagaa attgatgaat caaatcatgg
      121 agctaaaatt caccgccaaa agccttcaac gtcaggcgag aaaatgcgaa aaagacgaga
      181 aatcggaaaa actcaaagtt aaaaaagcaa tcgagaaagg aaacatggac ggagcaagaa
      241 tctacgctga aaacgcaatc cgtaaacgta acgaacaaat gaattacctc cgattagcct
      301 ctcgtctcga cgccgttgtc gctcgtctcg atacgcaagc gaaaatgaat acaattagca
      361 aatcgatggg atcgattgtc aaatcgctcg aatcgacgtt agctacaggc aatttacaga
      421 aaatgtctga aactatggat aattttgaga aacagtttgt taatatggaa gtacaagctg
      481 agtttatgga gagttcgatg gctggaagca cgtcgttatc gactcctgaa ggtgaagtta
      541 atagtttgat gcaacaagtt gcggatgatt acggtttgga ggtttcggtt ggtttgccgc
      601 aacctgctgc gcatgctgtg ccaactacga atgctgagaa ggttgatgaa gatgatttgt
      661 ctagacgtct tgccgaactt aaagctcgtg gttgaatgtg atatgataac gatttactta
      721 tgtggtataa tattatatta tgcttactat atgctatgac tggaataaat atatgtatat
      781 ttggctgaac ttttattcta gttgtgtgaa tttatactgg tttaaacctc ttaattgca
//
LOCUS       XM_071830300            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840081), transcript variant X1, mRNA.
ACCESSION   XM_071830300
VERSION     XM_071830300.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139840081"
                     /note="uncharacterized LOC139840081; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840081"
     CDS             92..1024
                     /gene="LOC139840081"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686401.1"
                     /db_xref="GeneID:139840081"
                     /translation="MSILNQIFNRGLIGAKCKTCLTLAISRIKLLQNKRDTQLKLMRQ
                     EIAQFLQSGQEPIARIRVEHIIREQNIWAAYEILEMFCEFVLARVPIIESQKECPLEL
                     KEAVASIIFAAPRCSDLPDLLTVRNLFATKYGKEFIAAASELRPDTSVNRTIIEKLSV
                     YTPSGEVKLNVLKEIAREYNILWDSSKTEAEFNKLPEDLLNGPRRISSVTSQINNKEP
                     PKAVLRPPLISSPQVPVQPLQSPKAAAIVSPFEVKQSLAESQKGRPVSSESLDVLERA
                     RVAIAAADRASAAARAAAELVNVNNNSISSEMSR"
     misc_feature    143..634
                     /gene="LOC139840081"
                     /note="Regulator of Vps4 activity in the MVB pathway;
                     Region: Ist1; pfam03398"
                     /db_xref="CDD:460910"
     polyA_site      1077
                     /gene="LOC139840081"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaaacggag ctgatcgacc aaatcgactg cctgaatcgt acgcccacca ccgccgatat
       61 aaacaacata tgtccgattg ttccggtttc aatgtctatt ttgaatcaaa tcttcaatag
      121 gggacttatt ggtgcaaaat gtaaaacatg cctaacgtta gcgatatcaa ggattaaatt
      181 gcttcaaaac aagagagaca cacagttgaa actaatgcgc caggaaatag ctcagtttct
      241 tcaatctggg caagaaccaa tagcgcggat acgagtggag catattataa gagaacaaaa
      301 tatatgggct gcctatgaga tcttggagat gttttgtgag ttcgttcttg cacgagttcc
      361 gattatcgaa agccagaaag aatgtccatt ggagttaaaa gaagctgttg caagcataat
      421 ttttgcagct ccgagatgct ccgatttgcc cgatttattg actgttagaa atttgttcgc
      481 tacaaaatac gggaaggagt ttattgcagc tgcctctgag cttcgacctg atacaagtgt
      541 caaccgtaca ataattgaga aactttcagt ttatactccg tccggtgagg taaagcttaa
      601 cgtattaaaa gaaattgcac gagaatataa tatcttatgg gattcttcta aaaccgaagc
      661 tgaattcaac aaattgccgg aggatctttt gaatggacca aggcgtatat caagcgtcac
      721 ttcacaaatc aataataaag aaccccctaa agctgtactt cggccaccat tgatcagcag
      781 cccacaagtt cctgttcagc cacttcaatc tcccaaggct gctgcaatcg tgagtccgtt
      841 cgaagtcaaa cagtcgttag cagaaagtca aaagggaaga ccagtttcat cggagtcact
      901 tgatgtgttg gagagagctc gtgttgcgat agctgctgca gatcgtgcat cagctgctgc
      961 tcgtgctgcg gctgaattag ttaatgttaa taataactca atatcatcag aaatgagtag
     1021 ataattctac taaagtatat gatcacaaat tgttaatttt atctcttatt tttttta
//
LOCUS       XM_071830301            1718 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840081), transcript variant X2, mRNA.
ACCESSION   XM_071830301
VERSION     XM_071830301.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1718
                     /gene="LOC139840081"
                     /note="uncharacterized LOC139840081; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840081"
     CDS             92..880
                     /gene="LOC139840081"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686402.1"
                     /db_xref="GeneID:139840081"
                     /translation="MSILNQIFNRGLIGAKCKTCLTLAISRIKLLQNKRDTQLKLMRQ
                     EIAQFLQSGQEPIARIRVEHIIREQNIWAAYEILEMFCEFVLARVPIIESQKECPLEL
                     KEAVASIIFAAPRCSDLPDLLTVRNLFATKYGKEFIAAASELRPDTSVNRTIIEKLSV
                     YTPSGEVKLNVLKEIAREYNILWDSSKTEAEFNKLPEDLLYLTETTPVLVTLEELHIK
                     PCISHYKFMFKRYYVSKSMFFPTNFSISLGFLFTLEQGHKTVNF"
     misc_feature    143..634
                     /gene="LOC139840081"
                     /note="Regulator of Vps4 activity in the MVB pathway;
                     Region: Ist1; pfam03398"
                     /db_xref="CDD:460910"
ORIGIN      
        1 acaaacggag ctgatcgacc aaatcgactg cctgaatcgt acgcccacca ccgccgatat
       61 aaacaacata tgtccgattg ttccggtttc aatgtctatt ttgaatcaaa tcttcaatag
      121 gggacttatt ggtgcaaaat gtaaaacatg cctaacgtta gcgatatcaa ggattaaatt
      181 gcttcaaaac aagagagaca cacagttgaa actaatgcgc caggaaatag ctcagtttct
      241 tcaatctggg caagaaccaa tagcgcggat acgagtggag catattataa gagaacaaaa
      301 tatatgggct gcctatgaga tcttggagat gttttgtgag ttcgttcttg cacgagttcc
      361 gattatcgaa agccagaaag aatgtccatt ggagttaaaa gaagctgttg caagcataat
      421 ttttgcagct ccgagatgct ccgatttgcc cgatttattg actgttagaa atttgttcgc
      481 tacaaaatac gggaaggagt ttattgcagc tgcctctgag cttcgacctg atacaagtgt
      541 caaccgtaca ataattgaga aactttcagt ttatactccg tccggtgagg taaagcttaa
      601 cgtattaaaa gaaattgcac gagaatataa tatcttatgg gattcttcta aaaccgaagc
      661 tgaattcaac aaattgccgg aggatctttt gtatttgacg gaaacaaccc ctgtacttgt
      721 aactttggaa gaattacaca ttaaaccctg catttcacat tataaattta tgtttaagag
      781 atactatgta agtaagtcaa tgtttttccc aactaatttt tcaatcagct taggattttt
      841 atttacacta gaacaaggcc ataaaactgt caacttttga ccgacattga ctgacttttc
      901 ccgagtttgg catgactttt aaaatttgac cgactaatta gacatttttg ggttaatcgg
      961 gacaggctag tcaccaaact gccgcaatcg ccgtttgcaa ccatatagta gcttggaaaa
     1021 gatgaggttg ttttggcact ttgactccta tgataccacc gacttaaagc aaatgagaaa
     1081 tgatatatcc ttctataagt tttcctgatg ctacataaag tgttgaagaa ctcgggagta
     1141 ctcggcaaaa aaagtccccc gattactcgg tccaacaact cggattactc ggtcaaactc
     1201 agtcaaaact tgggattact cggtcaaagt caaacttggt caagtactca tactccccga
     1261 gttgcctagt actctctaaa aattcccgac tgagtattcc cgagtagcga ttgttgctac
     1321 cttggctaca ttgatatgaa tccatgagag agtgaggatg tgtgtctatt tattgctctc
     1381 atggatccat gctatttttc attagaatga tttgtagaac tagctacatt aatttttttt
     1441 gttaatgcac tataaattat ttatttggcc attatatata ctctccaata tatgtggtat
     1501 tattttttca ccaatgttac ttaccttaga aaaacataat tgacttcatt aaatttttat
     1561 tacttactat tgtcatgtta gtacccaaaa ggagcaacaa agtaagataa cttctggttc
     1621 aagttgggtt gggttgaccc gaaacacgtt ttgtattaag tttgtgtgta catagcataa
     1681 atcttaatca agaatgctac aaacgtacga atgtatct
//
LOCUS       XM_071830302            1331 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ceramide synthase 1
            LOH3-like (LOC139840082), mRNA.
ACCESSION   XM_071830302
VERSION     XM_071830302.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1331
                     /gene="LOC139840082"
                     /note="ceramide synthase 1 LOH3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139840082"
     CDS             12..944
                     /gene="LOC139840082"
                     /codon_start=1
                     /product="ceramide synthase 1 LOH3-like"
                     /protein_id="XP_071686403.1"
                     /db_xref="GeneID:139840082"
                     /translation="MMEIVETIKSIDFEQESYPTYGDFTVLPIFAIFFPTVRFFLDRF
                     LFEHVGRWLIFEKGQQKLDVETDDRNKKIRKFKESAWKCVYFLSAEILALVVTYNEPY
                     FTNTNYFWIGPGDQRWPDQKMKLKLKGLYMYTGGFYTYSIFALIFWETRRSDFGVSMG
                     HHVATAILIAMSYICRFARAGSIILALHDASDVFLEVGKMSKYSGAEALASFSFVLFV
                     LSWVILRLIYYPFWILWSTSYEVVMTLDKEKQIKEAPLYYYVFNTLLYCLLVLHIYWW
                     VLMYRMLVKQIQDRGKLSDDVRSDSDDSDKEHED"
     misc_feature    231..875
                     /gene="LOC139840082"
                     /note="TRAM, LAG1 and CLN8 homology domains; Region: TLC;
                     smart00724"
                     /db_xref="CDD:214789"
ORIGIN      
        1 tataggttta aatgatggaa attgtagaaa caattaaatc aattgacttt gaacaagaat
       61 cgtacccaac atatggagat ttcactgttc ttccaatatt tgctatcttc ttcccaactg
      121 ttaggttttt tctcgataga ttcctttttg agcatgtagg taggtggttg atatttgaaa
      181 aagggcagca gaagttggat gttgagacag atgatcggaa taaaaaaata cggaaattta
      241 aagaatcggc gtggaaatgc gtttattttc tgtcagcaga aattttagcc ctggttgtaa
      301 cctataatga accgtatttt acaaacacta attatttttg gattggtcct ggtgatcaga
      361 gatggcctga ccagaaaatg aagttaaaat tgaaaggtct atacatgtat acgggtggat
      421 tctacacgta ttccatcttt gctttgattt tctgggaaac aaggagatcg gattttggtg
      481 tgtcaatggg acatcatgtt gcaactgcta ttctcattgc aatgtcctat atatgcaggt
      541 ttgctcgtgc gggttcgata attttagctc ttcatgatgc gagtgatgta tttcttgaag
      601 taggaaagat gtctaaatac agtggtgcag aagcacttgc aagtttttca tttgttctgt
      661 ttgtattgtc gtgggtgatt cttcgtctta tttattaccc attttggatc ctttggagta
      721 caagttatga agtggttatg acattggata aggagaagca aattaaggag gccccactat
      781 actattatgt gttcaacacc cttctctatt gtttgcttgt tcttcacata tattggtggg
      841 tgcttatgta tcgcatgctt gttaaacaga ttcaagatag agggaaactt agtgacgatg
      901 ttcgttctga ttctgatgat agtgataaag aacatgagga ttgattactt gtttctggta
      961 gggctgttag ggaagtcact ataaggtggg gggagatgtt tttttgtatc gaccttaaat
     1021 tttatgtaag aaatgagatt taacagactg gtatacgtag agcgtcaaat agctatacaa
     1081 attcagcttt caccattgaa tgctggttca ttgttgtttc atttttggtt tgttgataat
     1141 ttttttgctt taactgtact tattattatc atcaaggaac tttggtgtta ttgttggatc
     1201 aacagagtca cgtatcattg tatctttcag ttcaatatat gatgtaattg atttaaggtt
     1261 gtcttttttt ttttttttcc ccctcctcga aagggaatgt ctcacagtgt agcttgtggg
     1321 gatgtgtctc c
//
LOCUS       XM_071830303            1733 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides amino acid transporter
            AVT6A-like (LOC139840083), mRNA.
ACCESSION   XM_071830303
VERSION     XM_071830303.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1733
                     /gene="LOC139840083"
                     /note="amino acid transporter AVT6A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139840083"
     CDS             2..1543
                     /gene="LOC139840083"
                     /codon_start=1
                     /product="amino acid transporter AVT6A-like"
                     /protein_id="XP_071686404.1"
                     /db_xref="GeneID:139840083"
                     /translation="MYRFHLIHTRISIFNSISHFPYFITQYTQFPLQESSSHTIMTIQ
                     AEPQQIKKHKHTSSRKHKRKDSHVSVSVNEKTPLIPKKKGGNNHSEFNGASMSGAVMN
                     LSTTIIGAGIMALPATMKVLGLGLGMVVIILVAVLSEATVRILLKYSKAGGADSYGGL
                     MGDAFGDFGKKVLQGCVVINNIGVLIIYMIIIGDVVAGSTSDGLHHPGLLEGWFGPHW
                     WTGRVIVLLVTTFGVFVPLASLKRMDSLSVTSGLAVALAVIFLIITAGIAIFKIANGT
                     LPNPRLLPDVTDINSVWNLFTAVPVLVTAYICHFNVHSIANELENPSLIEPIVQISLV
                     LCTFVYIMVSIFGFILFGDSTMGDILSNFDSDLGVPFCGQLNDIVRVSYALHLMLVFP
                     LVFYALRLNTDGLFFGSSEQPLESDNKRFAIVSVGLLTVIYLGANFIPSAWDAFQFTG
                     ATAAVCIGFIFPASIAIRDVHGIATKGDKMMAVLMIGLAVFANAVAIYSDAYALFKKN
                     PSPRA"
     misc_feature    278..1405
                     /gene="LOC139840083"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; Region: SLC5-6-like_sbd; cl00456"
                     /db_xref="CDD:444915"
     polyA_site      1733
                     /gene="LOC139840083"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatgtataga ttccatctaa ttcacacacg catttcaatt ttcaattcaa tttcccattt
       61 cccatatttt ataacacaat acacacaatt cccactccaa gaatcatcat cacacacaat
      121 catgacaatt caagcagaac ctcaacaaat caaaaaacac aaacacacat catcaagaaa
      181 acacaaaaga aaagacagtc atgtttcagt ttcagtcaac gaaaaaacac cattaattcc
      241 taagaaaaag ggtggaaaca atcacagtga gtttaatggg gcctccatgt ccggtgcggt
      301 tatgaacctt tcgacaacga ttattggtgc tggaataatg gcgttaccgg ctacaatgaa
      361 ggtgttggga ctcggtcttg gtatggtggt tataattctt gttgcggttt tgtcggaagc
      421 aacagttaga atattgttaa agtatagtaa agctgggggt gcagattctt atggtgggtt
      481 gatgggtgat gcttttggtg attttgggaa aaaagtattg caaggttgtg tggtgattaa
      541 taatattggt gtgcttatta tctacatgat tataattggt gatgtagtgg ctggatcaac
      601 ttcagatggg ttgcaccacc ctggtctatt agaaggctgg tttggaccac actggtggac
      661 cggtagagtc attgttcttc tagtcacaac attcggggtg tttgttccat tagcatccct
      721 caagcgtatg gattcactta gtgttacatc cggtttagcc gttgcactag ctgtaatctt
      781 cctaataatt acagcaggaa ttgcaatttt taaaatcgca aacgggaccc tcccaaatcc
      841 aagattactt ccagatgtta cagatattaa ttctgtatgg aacctcttca ctgcagtccc
      901 tgttcttgta accgcttaca tttgtcattt taacgtgcat tctattgcaa atgagcttga
      961 aaacccttcg cttatcgaac caattgtaca gatatcttta gttttatgta catttgtgta
     1021 cataatggtt agtatctttg gatttatact atttggtgac tccacaatgg gagatatatt
     1081 gtcgaatttc gactcagatt tgggtgttcc tttttgtgga caactcaatg acattgttcg
     1141 tgtcagctac gctctgcact taatgctcgt tttcccactt gtattttacg ctctacgcct
     1201 taatacggat gggcttttct ttggatcatc cgaacaacca cttgaatcag ataacaaacg
     1261 gttcgctatt gttagtgtcg gtcttcttac agttatatat ttgggtgcta atttcatacc
     1321 aagcgcttgg gacgcgttcc agtttacagg agcaacggct gccgtttgca tagggttcat
     1381 ttttccggct tcgattgcta taagggatgt tcatggaata gcaacaaaag gagataagat
     1441 gatggctgtt ttgatgattg gtttggctgt ttttgcaaat gctgtggcta tatacagtga
     1501 tgcgtacgcc ttattcaaga aaaacccgtc tcctcgtgct tgattttata ttccgtacaa
     1561 gtcaatccaa gcctggttat atggtgtcaa ttcgagccaa attttgtgta aaagatgtgt
     1621 ttgtttgatg gtgtttcatt aagtgtataa gtactcattt gttgtataaa ttgtattatc
     1681 atattgttat cagtcataag gttgcactag cgtgcaataa ggatattatc taa
//
LOCUS       XR_011757232            1072 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840084), transcript variant X1, ncRNA.
ACCESSION   XR_011757232
VERSION     XR_011757232.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1072
                     /gene="LOC139840084"
                     /note="uncharacterized LOC139840084; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840084"
     ncRNA           1..1072
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840084"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840084"
ORIGIN      
        1 aacccctttt atcaattttg taaaataaga tagctcaaca gaattaacat tagaccatat
       61 acatccatca ctaccaccct aacttaacat ggagtacact aaaggaataa gggatctcat
      121 catctttctc ctacagttat ctttttcacc catattctct aaaaattgaa atacaccacc
      181 acacctaaaa cagtagctaa ctccggcgcc gccgatctcc ggtgacattt tctctccatc
      241 tccggtcaag actcagcggc cgctcacctt ctttacccaa atctttccag atctggaaat
      301 ttaaatagat ctagcttttt ttttcatggc gcaaccgacg tcgactcctc cggcacaact
      361 taacccgtct gacaaaccga gttatcgaag cgagagttta caaaaggtgg gtcactagga
      421 atacatccac ttagtctgcc actggatact gcaaaaacaa ccatcgatta caacatcagc
      481 tctagagagc tcaccggttt cacaggacaa attgggcgcc attattttaa gaacccaaag
      541 agagaagtgg cttctctgag actgcagaaa gatgcacgca agtttctcaa gagaaaagtg
      601 tacagacttt tattcttttc ggctattcat attcaaggtg gactgcgtgg aatgactgca
      661 cgtaatgaat atcgctataa aaagcgagaa acagcagcta tcgatatcag gtgtgtattt
      721 cttgttataa ctataggtag agggcttatg ctaaaaatcg acaaaatgcc taaaatcacc
      781 aagtgggttg caaagaattg atgtgaaaaa tcttctcttc tattagtcaa catacttata
      841 tattgactct gaagactaag attcgaatga gtttgataac gtggaacttg aagtgaagac
      901 gaaaaaccaa tagctaaaac tagaggcatg gcgaaatgga gtttaatgat ataggttagc
      961 ttagatgaag attacattca gctgtgtttt agtgctaatg atattaaact ttttctgcac
     1021 atttagggaa cttttattgt ttattttgtt atgtgattat tgattgtcca aa
//
LOCUS       XR_011757233             942 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840084), transcript variant X2, ncRNA.
ACCESSION   XR_011757233
VERSION     XR_011757233.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..942
                     /gene="LOC139840084"
                     /note="uncharacterized LOC139840084; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840084"
     ncRNA           1..942
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840084"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840084"
ORIGIN      
        1 aacccctttt atcaattttg taaaataaga tagctcaaca gaattaacat tagaccatat
       61 acatccatca ctaccaccct aacttaacat ggagtacact aaaggaataa gggatctcat
      121 catctttctc ctacagttat ctttttcacc catattctct aaaaattgaa atacaccacc
      181 acacctaaaa cagtagctaa ctccggcgcc gccgatctcc ggtgacattt tctctccatc
      241 tccggtcaag actcagcggc cgctcacctt ctttacccaa atctttccag atctggaaat
      301 ttaaatagat ctagcttttt ttttcatggc gcaaccgacg tcgactcctc cggcacaact
      361 taacccgtct gacaaaccga gttatcgaag cgagagttta caaaaggtgg gtcactagga
      421 atacatccac ttagtctgcc actggatact gcaaaaacaa ccatcgatta caacatcagc
      481 tctagagagc tcaccggttt cacaggacaa attgggcgcc attattttaa gaacccaaag
      541 agagaagtgg cttctctgag actgcagaaa gatgcacgca agtttctcaa gagaaaagtg
      601 tacagacttt tattcttttc ggctattcat attcaaggtg gactgcgtgg aatgactgca
      661 cgtaatgaat atcgctataa aaagcgagaa acagcagcta tcgatatcag tattgactct
      721 gaagactaag attcgaatga gtttgataac gtggaacttg aagtgaagac gaaaaaccaa
      781 tagctaaaac tagaggcatg gcgaaatgga gtttaatgat ataggttagc ttagatgaag
      841 attacattca gctgtgtttt agtgctaatg atattaaact ttttctgcac atttagggaa
      901 cttttattgt ttattttgtt atgtgattat tgattgtcca aa
//
LOCUS       XM_071830304             792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides agamous-like MADS-box
            protein AP1 (LOC139840085), mRNA.
ACCESSION   XM_071830304
VERSION     XM_071830304.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..792
                     /gene="LOC139840085"
                     /note="agamous-like MADS-box protein AP1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 Proteins"
                     /db_xref="GeneID:139840085"
     CDS             49..792
                     /gene="LOC139840085"
                     /codon_start=1
                     /product="agamous-like MADS-box protein AP1"
                     /protein_id="XP_071686405.1"
                     /db_xref="GeneID:139840085"
                     /translation="MGRGKVQLKRIENKINRQVTFSKRRGGLLKKAHEISVLCDAEVA
                     LIVFSNKGKLFEFSTDSCMESILERYERYSYTERQLVATDPSPRSWTLEYNKLKSRAE
                     LLQRNHKHYLGEDIESLTLKEIQNLEQQLDTGLKNIRTRKNQLLHESISELQKKGKAI
                     QDQNTSLTKKIKEKEKDKTIPQNTRWEQHNYVDHDTTFLMPPPPPLNMGANYDQGGGS
                     DQGGDHARTNELDLSLQPIYSCHMRCFPS"
     misc_feature    52..273
                     /gene="LOC139840085"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; Region:
                     MADS_MEF2_like; cd00265"
                     /db_xref="CDD:238165"
     misc_feature    order(52..60,64..66,70..72,85..87,91..93,103..108,
                     115..120,124..129,136..141,145..150,160..162)
                     /gene="LOC139840085"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     misc_feature    order(109..111,130..135,142..147,151..156,163..165,
                     178..180,184..186,190..192,208..210,214..216,235..237,
                     244..249,256..258,265..270)
                     /gene="LOC139840085"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238165"
     misc_feature    223..225
                     /gene="LOC139840085"
                     /note="putative phosphorylation site [posttranslational
                     modification]; other site"
                     /db_xref="CDD:238165"
     misc_feature    313..552
                     /gene="LOC139840085"
                     /note="K-box region; Region: K-box; pfam01486"
                     /db_xref="CDD:460228"
ORIGIN      
        1 tttctggatt tggtttgttt gttttatttt aatttgtgaa aatcaagaat gggaagaggt
       61 aaggtacaac ttaaaaggat agaaaacaag ataaacaggc aagttacttt ctcaaagagg
      121 agaggtggtt tattaaaaaa agcccatgaa atttctgttc tttgtgatgc tgaagttgct
      181 ttaattgttt tctccaacaa aggaaagctc tttgagtttt ctactgactc ttgcatggaa
      241 agcatcttgg agcgatatga gcgatattct tacaccgaga gacagttagt tgcaacagat
      301 cctagtccga gaagctggac cctggaatac aacaagctca aatctagggc tgagctttta
      361 cagagaaatc acaagcatta tttgggtgaa gatatagagt cattaacctt gaaagaaatc
      421 caaaacttgg aacaacaact tgatactggt ctgaagaata ttcgcactag aaaaaaccaa
      481 ctgcttcacg aatcaatctc agagcttcag aaaaagggga aggccataca ggatcagaac
      541 actagcttga caaaaaaaat caaggagaag gaaaaagaca agacaatacc acaaaacact
      601 cgatgggaac aacataacta tgttgaccac gataccacct ttctcatgcc accacctcca
      661 cctctcaaca tgggagcaaa ttacgatcag ggtggtggta gtgatcaagg aggtgatcac
      721 gcgaggacta atgagctcga tctgagtctg cagccgatat attcgtgcca catgaggtgt
      781 tttccatcgt aa
//
LOCUS       XM_071830305            1897 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At1g76660-like (LOC139840086), transcript variant X1, mRNA.
ACCESSION   XM_071830305
VERSION     XM_071830305.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1897
                     /gene="LOC139840086"
                     /note="uncharacterized protein At1g76660-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840086"
     CDS             428..1708
                     /gene="LOC139840086"
                     /codon_start=1
                     /product="uncharacterized protein At1g76660-like isoform
                     X1"
                     /protein_id="XP_071686406.1"
                     /db_xref="GeneID:139840086"
                     /translation="MASEQNRFLLQHQQQHQQPPSSRVNFRKRWGGCLSGLSCFGLQK
                     GGKRVVPASRMPETNATANQQNAIQSTGLTNQNNSVHPSLLAPPSSPASFTNSALQST
                     AQSPNCFLSANSPGPSNTMFATGPYAHETQLVSPPVFSTFTTEPSTAPLTPPPELAHL
                     TTPSSPDVPYAQFLSSNLNLKGHKNNYMNANDLQATYSLYPGSPASTLRSPISRTSGE
                     PERDFSPQWNPSPPFQEKGSDAKLPQDANFFCPKTFAQYYLDQSSFAQSGGRLSVSKE
                     SDVYSNGVQSRQSKACKQDIEELDAYRASFGFSADEIVTTAHYVEISDVMDESFSMMP
                     SGSNKIHEDKNVPSLVINERPSPKSCRSGPSSCDALKDVREPCLTDDEDIFSKMGGSS
                     RMNGKYHHGSNSDAEIEYRRGRSLRESRGNLKWP"
     polyA_site      1897
                     /gene="LOC139840086"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacaattaca gtggcaaccc tttaattcat ctttgatcat tcccatttta cttgtacttt
       61 tttttttttt tttcttcttc tcaaaaccct agacctcatt gggtccccaa aagttgataa
      121 agtaatcaaa agcaagcagc atcacatcca tccctaataa tcttctttag tacccatttc
      181 ccaatttcct aattttttta ttaataaatc tttcatcttt tttaccaaat ctataacctg
      241 tcagcttctg ctcctcagct caaatactat gttgtaacca cactcactca cacatacata
      301 tacatacaca tttgcaccca agtattcagt catcattcat caactggatg taaatccttt
      361 ttttattttt taatttaaaa tctaggttaa aaagggtttc atttgatcga ttgatttatt
      421 agctgaaatg gcttcagagc agaacagatt tctgctgcaa catcagcaac agcatcaaca
      481 accaccttct tcccgggtaa attttcgaaa aagatgggga ggctgtttaa gtggcttatc
      541 ttgttttggg ttgcaaaaag gtggaaaacg agtggtcccc gcatctcgta tgcccgaaac
      601 caacgcaacc gcaaaccaac aaaatgcgat tcaatctacc ggtttaacca atcagaacaa
      661 ctcggttcat ccgtcactat tagctccacc atcttcaccc gcatccttca ccaattccgc
      721 cttacaatca accgcccaat caccaaactg tttcttatct gcaaactctc cgggcccgtc
      781 taacacaatg tttgcaaccg ggccctacgc tcacgagacc caactcgtgt ccccacccgt
      841 cttctcaacc ttcaccaccg aaccatcaac cgcacctctt acaccaccac ccgagttagc
      901 ccatttgacg acaccctcat cacccgatgt cccgtatgca cagtttttat cttctaattt
      961 gaatcttaaa ggtcataaga ataattatat gaacgcaaat gaccttcaag caacgtattc
     1021 tttatacccg ggtagcccgg ctagtacgct taggtcaccg atatcacgaa catctggtga
     1081 acccgaaaga gatttcagcc cgcaatggaa tccttcacca ccttttcaag aaaaaggatc
     1141 ggatgccaag ttaccgcaag atgctaactt tttttgtccc aagacgtttg cgcaatatta
     1201 tttggatcaa tcttcgtttg ctcaatcggg tggtaggtta agtgtttcta aagaatcgga
     1261 tgtttattcc aacggggttc aaagtaggca gagtaaagcg tgtaaacaag atatcgagga
     1321 attagatgct tatcgagcgt cttttgggtt tagtgctgat gaaattgtta cgacggctca
     1381 ttatgtagag atttctgatg ttatggatga atcgttttcg atgatgccgt ctgggtctaa
     1441 taagattcac gaggacaaaa acgtaccaag tcttgttatt aatgaacggc cgagcccaaa
     1501 aagttgcagg agtgggccaa gttcgtgtga tgctttaaaa gatgttagag aaccttgttt
     1561 aacggatgat gaagacatat tttcaaagat gggtggttct tcaagaatga atggaaaata
     1621 tcatcatggg tcgaattcag atgcagagat cgagtacaga agagggagaa gtttgagaga
     1681 gagcagagga aacttgaaat ggccatgaaa aaattgcaca gttggtttct gtatgtatgt
     1741 atgtatttat attaatctgc ttgcttgctc tatctatttc tgatccttgc ttaagaaaga
     1801 aagcaccaat ggatgcttgt gttgtctatt gttatatgat gatgttttta cctttttatt
     1861 catgtaacta ttatgaatta tgatattata ttatgta
//
LOCUS       XM_071830306            1886 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At1g76660-like (LOC139840086), transcript variant X2, mRNA.
ACCESSION   XM_071830306
VERSION     XM_071830306.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1886
                     /gene="LOC139840086"
                     /note="uncharacterized protein At1g76660-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139840086"
     CDS             426..1697
                     /gene="LOC139840086"
                     /codon_start=1
                     /product="uncharacterized protein At1g76660-like isoform
                     X2"
                     /protein_id="XP_071686407.1"
                     /db_xref="GeneID:139840086"
                     /translation="MASEQNRFLLQHQQQHQQPPSSRRKRWGGCLSGLSCFGLQKGGK
                     RVVPASRMPETNATANQQNAIQSTGLTNQNNSVHPSLLAPPSSPASFTNSALQSTAQS
                     PNCFLSANSPGPSNTMFATGPYAHETQLVSPPVFSTFTTEPSTAPLTPPPELAHLTTP
                     SSPDVPYAQFLSSNLNLKGHKNNYMNANDLQATYSLYPGSPASTLRSPISRTSGEPER
                     DFSPQWNPSPPFQEKGSDAKLPQDANFFCPKTFAQYYLDQSSFAQSGGRLSVSKESDV
                     YSNGVQSRQSKACKQDIEELDAYRASFGFSADEIVTTAHYVEISDVMDESFSMMPSGS
                     NKIHEDKNVPSLVINERPSPKSCRSGPSSCDALKDVREPCLTDDEDIFSKMGGSSRMN
                     GKYHHGSNSDAEIEYRRGRSLRESRGNLKWP"
     polyA_site      1886
                     /gene="LOC139840086"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caattacagt ggcaaccctt taattcatct ttgatcattc ccattttact tgtacttttt
       61 tttttttttt tcttcttctc aaaaccctag acctcattgg gtccccaaaa gttgataaag
      121 taatcaaaag caagcagcat cacatccatc cctaataatc ttctttagta cccatttccc
      181 aatttcctaa tttttttatt aataaatctt tcatcttttt taccaaatct ataacctgtc
      241 agcttctgct cctcagctca aatactatgt tgtaaccaca ctcactcaca catacatata
      301 catacacatt tgcacccaag tattcagtca tcattcatca actggatgta aatccttttt
      361 ttatttttta atttaaaatc taggttaaaa agggtttcat ttgatcgatt gatttattag
      421 ctgaaatggc ttcagagcag aacagatttc tgctgcaaca tcagcaacag catcaacaac
      481 caccttcttc ccggcgaaaa agatggggag gctgtttaag tggcttatct tgttttgggt
      541 tgcaaaaagg tggaaaacga gtggtccccg catctcgtat gcccgaaacc aacgcaaccg
      601 caaaccaaca aaatgcgatt caatctaccg gtttaaccaa tcagaacaac tcggttcatc
      661 cgtcactatt agctccacca tcttcacccg catccttcac caattccgcc ttacaatcaa
      721 ccgcccaatc accaaactgt ttcttatctg caaactctcc gggcccgtct aacacaatgt
      781 ttgcaaccgg gccctacgct cacgagaccc aactcgtgtc cccacccgtc ttctcaacct
      841 tcaccaccga accatcaacc gcacctctta caccaccacc cgagttagcc catttgacga
      901 caccctcatc acccgatgtc ccgtatgcac agtttttatc ttctaatttg aatcttaaag
      961 gtcataagaa taattatatg aacgcaaatg accttcaagc aacgtattct ttatacccgg
     1021 gtagcccggc tagtacgctt aggtcaccga tatcacgaac atctggtgaa cccgaaagag
     1081 atttcagccc gcaatggaat ccttcaccac cttttcaaga aaaaggatcg gatgccaagt
     1141 taccgcaaga tgctaacttt ttttgtccca agacgtttgc gcaatattat ttggatcaat
     1201 cttcgtttgc tcaatcgggt ggtaggttaa gtgtttctaa agaatcggat gtttattcca
     1261 acggggttca aagtaggcag agtaaagcgt gtaaacaaga tatcgaggaa ttagatgctt
     1321 atcgagcgtc ttttgggttt agtgctgatg aaattgttac gacggctcat tatgtagaga
     1381 tttctgatgt tatggatgaa tcgttttcga tgatgccgtc tgggtctaat aagattcacg
     1441 aggacaaaaa cgtaccaagt cttgttatta atgaacggcc gagcccaaaa agttgcagga
     1501 gtgggccaag ttcgtgtgat gctttaaaag atgttagaga accttgttta acggatgatg
     1561 aagacatatt ttcaaagatg ggtggttctt caagaatgaa tggaaaatat catcatgggt
     1621 cgaattcaga tgcagagatc gagtacagaa gagggagaag tttgagagag agcagaggaa
     1681 acttgaaatg gccatgaaaa aattgcacag ttggtttctg tatgtatgta tgtatttata
     1741 ttaatctgct tgcttgctct atctatttct gatccttgct taagaaagaa agcaccaatg
     1801 gatgcttgtg ttgtctattg ttatatgatg atgtttttac ctttttattc atgtaactat
     1861 tatgaattat gatattatat tatgta
//
LOCUS       XM_071830307            1015 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides MADS-box protein
            04g005320-like (LOC139840087), mRNA.
ACCESSION   XM_071830307
VERSION     XM_071830307.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1015
                     /gene="LOC139840087"
                     /note="MADS-box protein 04g005320-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139840087"
     CDS             93..830
                     /gene="LOC139840087"
                     /codon_start=1
                     /product="MADS-box protein 04g005320-like"
                     /protein_id="XP_071686408.1"
                     /db_xref="GeneID:139840087"
                     /translation="MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELA
                     LIIFSSVGKLYEFCSGPSMAKTLERYHRCSFGAMEANNLDQEPQSSYQEYLKLKAKVD
                     ILQQSQRHFLGEELEQLGLKDLDQLERQLDSSLRKIRSTKTQHMFGQLSELQHKEQSL
                     LEINKSLRSKLEESSAAYHQLSWEEHGHHLEHRRTQTTHQNVDDQRIDRNENSENIQF
                     RYINNDIDIDVPSTSQNGSGVIPGWML"
     misc_feature    96..314
                     /gene="LOC139840087"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; Region:
                     MADS_MEF2_like; cd00265"
                     /db_xref="CDD:238165"
     misc_feature    order(96..104,108..110,114..116,129..131,135..137,
                     147..152,159..164,168..173,180..185,189..194,204..206)
                     /gene="LOC139840087"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     misc_feature    order(153..155,174..179,186..191,195..200,207..209,
                     222..224,228..230,234..236,252..254,258..260,279..281,
                     288..293,300..302,309..314)
                     /gene="LOC139840087"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238165"
     misc_feature    267..269
                     /gene="LOC139840087"
                     /note="putative phosphorylation site [posttranslational
                     modification]; other site"
                     /db_xref="CDD:238165"
     misc_feature    342..608
                     /gene="LOC139840087"
                     /note="K-box region; Region: K-box; pfam01486"
                     /db_xref="CDD:460228"
ORIGIN      
        1 ttaatttagt gctatcaaga aaaagtacaa gcaacctaag aactacccac aaaggaacag
       61 tttcagctgc cgacaaaaca agaagctagg aaatgggtag aggaaaagtg gaactgaaaa
      121 ggatagaaaa taagataaat agacaagtaa catttgcaaa aagaagaaat ggtttattga
      181 agaaggctta tgaactttct gttctttgtg atgctgagct tgctcttatt atcttttcaa
      241 gtgttggcaa gctctatgag ttctgcagtg gccctagcat ggccaagaca cttgaaagat
      301 accatagatg cagctttggc gcaatggaag ctaacaatct agaccaagag ccacagagca
      361 gctaccagga gtatttaaaa ctaaaagcaa aagttgacat cttgcaacaa tctcagagac
      421 attttcttgg ggaagaacta gagcagttgg gattaaagga tcttgatcag cttgagcgtc
      481 aactcgactc atctttaagg aaaatccggt cgactaagac tcaacatatg tttggtcaac
      541 tttcagaatt acagcacaag gaacaatcac tgctggaaat taacaaatcc ctaaggagta
      601 agttggaaga aagtagtgca gcttatcatc agttatcatg ggaagaacat gggcaccatc
      661 ttgagcacag gcggacacag acgactcacc agaacgttga tgatcaacgt attgatcgta
      721 atgaaaatag tgaaaatata caatttaggt acattaataa tgacatagac atagatgttc
      781 caagtacatc acaaaatggt agtggagtta taccagggtg gatgctataa ttaaagaccc
      841 accaagtaga tctttattgt tcgagtatat gtaacttatt tatagttcat gcacattata
      901 tttttgtaac ttcagtttga taaagcagct aatgctgtgt aaaataaaga taaataaatt
      961 attattgtac gtgtagcttg tgaattgtga tcatttgcgt gattcatgtg actta
//
LOCUS       XM_071830308            1581 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840088), mRNA.
ACCESSION   XM_071830308
VERSION     XM_071830308.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1581
                     /gene="LOC139840088"
                     /note="uncharacterized LOC139840088; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139840088"
     CDS             115..1257
                     /gene="LOC139840088"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686409.1"
                     /db_xref="GeneID:139840088"
                     /translation="MQSPAVAHRNFLDGATAIPLRRLKPTRSTTSPFTVRMSLREDAP
                     SLAVVGVTGAVGQEFLSVLSDRSFPYRSIKMLASKRSAGKKYTFEGNEYTVEELNENS
                     FKDVDIALFSAGGSISKEFGPIAVRCGSVVVDNSSAFRMDENVPLVIPEVNPDAMKHI
                     KIGSGKGGLIANPNCSTIICLMAATPLHKRAKVLRMVVSTYQAASGAGAAAMEELELQ
                     TREVLEGKRPTCQIFKQQYAFNLFSHNAPVLPNGYNEEEMKLVKETRKIWNDKDVKVT
                     ATCIRVPVMRAHAESVNLQFASPLDENEAREILRKAPGVIVIDDRANNHFPTPLEVSN
                     KDDVAVGRIRQDESQDGNHGLDIFVCGDQIRKGAALNAVQIAEMLL"
     misc_feature    223..1254
                     /gene="LOC139840088"
                     /note="aspartate semialdehyde dehydrogenase; Region:
                     PLN02383"
                     /db_xref="CDD:178009"
     polyA_site      1581
                     /gene="LOC139840088"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgggactcaa attgtaattt cacctacttt tactccatac ccataaaccc tacgcccatt
       61 cttttctagc cgccactttt ctaacattcc agctcaataa ctattccggt caaaatgcaa
      121 tctccggccg tcgctcaccg caacttcctc gacggcgcca ccgccatacc cctccgccga
      181 ctcaaaccta cacgctccac cacctcacct ttcaccgtcc gcatgtcact tcgggaagac
      241 gcgccatcac tcgccgtcgt cggcgtcacc ggcgccgtcg gtcaagaatt cctatccgta
      301 ctctccgacc gatcgtttcc gtacagatca attaaaatgc ttgcaagcaa acgttcagca
      361 ggaaagaaat atacatttga aggaaatgaa tatacagttg aagaattaaa tgaaaatagt
      421 tttaaagatg ttgatattgc gttgtttagt gctggtggtt caattagtaa agaatttggg
      481 cctattgcag taaggtgtgg atcagttgta gtggataata gctctgcttt tagaatggat
      541 gaaaatgtgc cgttagttat ccctgaagtt aacccggatg caatgaaaca tattaaaatc
      601 gggtcgggta aaggcggctt gattgcaaat ccgaattgtt cgactattat ttgtttgatg
      661 gctgctactc ctttacataa aagggcaaaa gtattaagaa tggtggttag tacgtaccag
      721 gctgctagtg gtgctggcgc tgcagctatg gaagagcttg agttgcagac tcgtgaggtg
      781 cttgaaggga aacgaccgac atgtcaaatc tttaagcagc agtatgcttt taatctattt
      841 tcacataatg caccagttct tccaaacgga tataatgagg aagaaatgaa gctggttaaa
      901 gagacaagga aaatttggaa tgacaaggat gtcaaagtga ctgcgacatg tatacgagtt
      961 cctgtgatgc gtgcacatgc cgaaagtgtg aatttacaat ttgcaagccc tcttgatgag
     1021 aatgaagcaa gggagatttt gaggaaggct ccgggtgtaa ttgttattga tgaccgagct
     1081 aacaatcact tccctacacc tttagaagtt tcaaacaaag atgacgtggc ggttggtagg
     1141 attcgtcagg acgagtctca agatggaaac cacggattgg atatttttgt ctgtggtgat
     1201 caaatacgca aaggggctgc tcttaatgct gtccagattg cagagatgtt gctgtaacct
     1261 aacgttttcc ttttcgccag gtaagttaag cagccaaaac attatgtgtg gaggagaaac
     1321 atacaagttg ttgaagacgc gatatataca ttctttcgaa tggattatca atggtagatt
     1381 ggtaatatgt tgtggttact tttgatttta caatcttgat accgataaac atgctttgaa
     1441 acatttgtaa catttttgat gatagatttg gggagtcaag tagttgttag gtcgagaaat
     1501 ctattgcgag ttcggttaca ataaggggaa tgtgagattg taaaatgttt tgacaaatat
     1561 tatgattttc ttattttggt a
//
LOCUS       XM_071830309            2118 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides MACPF domain-containing
            protein At1g14780 (LOC139840090), transcript variant X1, mRNA.
ACCESSION   XM_071830309
VERSION     XM_071830309.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2118
                     /gene="LOC139840090"
                     /note="MACPF domain-containing protein At1g14780; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840090"
     CDS             55..1848
                     /gene="LOC139840090"
                     /codon_start=1
                     /product="MACPF domain-containing protein At1g14780
                     isoform X1"
                     /protein_id="XP_071686410.1"
                     /db_xref="GeneID:139840090"
                     /translation="MSQNFVQNALDCLGKGFDLTSDFRLKYCKGNQRLVLLTDMENEL
                     LVPGFGLFQGVSSDIKCDKGDRVRFQSDILDFNQMSEFFNKTCSVPGKIPNGLFNAMF
                     GFQSGSWATDAANTKFLGLDGYFIMLFKVHLDRYPLILSDQVRNAVPSTWDPLALARF
                     IENYGTHIVVGITIGGKDVIMLKQNKSSPLEPSQLKNHLEDLGDQLFNGACAFSPHQP
                     KSKELKNKTFSAFNTFFDPEQMLFNGFSSSTTKNGITIMSSKRGGDLTSTMHCEWLST
                     VPSMPDAIAFDFIPITSLLHGVPGMGFLSHAINLYLRYKPPISDLQYFLDFQAHKYWA
                     PVHNDLSLGPTTNRAIKTPALNISLMGPKLYVNSTQVTITKKPVTGMRLYLEGMKCNR
                     LAIHLQHLSDTPVLFQDKISEPLHWRGSEEILDPSFFEPIQWKKFSHVSTAPVKYNPE
                     WASPEKDASFIVTGAHLHVKKHDSKNILHLRLLYSRVSSSCIFRSSWTSGPLNQSHKS
                     SFMSAISTSFLVNQDKELRSSDVVVDSGIYPNGPPVEVPTQKLLKFVDMTEICRGPRD
                     NPGHWLVTGAKLYLDKGKIRLLVKFSLLNIC"
     misc_feature    340..987
                     /gene="LOC139840090"
                     /note="MAC/Perforin domain; Region: MACPF; pfam01823"
                     /db_xref="CDD:460349"
ORIGIN      
        1 tatatatatt ccatttcaaa cctcgattct ctttgcacgt tcttcaaaca aaaaatgagc
       61 caaaacttcg tgcaaaatgc tcttgattgt ttaggaaaag gtttcgattt aacgtccgat
      121 tttcggttaa agtattgcaa aggtaaccag cgtttagttc tactaaccga tatggaaaat
      181 gagcttctgg tgcctggatt cgggttgttt caaggcgtgt catccgatat taaatgtgat
      241 aaaggtgatc gtgttcgatt tcaatccgat atcctcgact tcaatcaaat gtcggagttt
      301 ttcaacaaaa catgttcagt ccccggaaaa attccaaatg gattgtttaa tgccatgttc
      361 gggttccaaa gtggctcgtg ggctaccgat gcggctaaca cgaagttttt agggctagat
      421 ggttacttca ttatgttgtt taaggtgcat ctcgatcgtt atccgttgat tctttctgat
      481 caagttcgaa acgcggttcc ttcaacttgg gatccacttg ctcttgcaag gtttatagaa
      541 aattatggga ctcatattgt agttggcata actatagggg gaaaagatgt aataatgttg
      601 aagcaaaaca aatcttcacc tttggagcct tcacaactca aaaatcactt ggaagaccta
      661 ggagatcagt tgtttaatgg ggcttgcgca ttctcacctc atcaacccaa aagcaaagaa
      721 cttaagaaca agacattttc agcttttaac accttttttg acccggaaca aatgctcttc
      781 aacggattct catctagcac aacaaagaat ggtataacga taatgtcctc gaaaagagga
      841 ggagatctta catcgactat gcattgtgaa tggttatcaa cagtaccatc aatgcccgat
      901 gccattgctt tcgacttcat cccaattaca tctcttcttc atggtgttcc cggcatgggc
      961 ttcttgtcac acgccatcaa tctttacctt cgttataagc ctcctattag tgatttgcaa
     1021 tatttcttgg attttcaggc ccataaatat tgggctccag ttcacaatga tctctcatta
     1081 ggcccaacta caaatagggc catcaaaacc ccagccttga atatcagctt gatgggaccc
     1141 aagctctatg ttaactccac tcaggtcaca attacaaaaa aacctgtaac aggaatgagg
     1201 ctatatcttg aaggaatgaa atgcaatagg ttagctatac accttcaaca tctatcagat
     1261 acacctgttt tattccaaga taaaataagt gaacctttac attggcgcgg atcagaagaa
     1321 atacttgacc cgagtttttt tgaaccaatt caatggaaga agttttcgca cgtttcaacc
     1381 gccccagtaa aatacaatcc tgaatgggct tcacctgaaa aagatgcctc atttatcgtc
     1441 acaggcgctc accttcatgt caaaaagcat gattcgaaga acattttgca tctccggtta
     1501 ttatattcta gggtatcgag ctcgtgcatt tttcgatcat cgtggacaag tggcccactc
     1561 aatcaatcac acaaatcgag ctttatgtct gcaataagta catcattttt ggtgaatcaa
     1621 gacaaagagt taagatcttc ggatgttgtg gtcgattcgg gtatttaccc aaacgggcca
     1681 ccggttgagg taccaacaca aaaactatta aagtttgttg atatgacaga aatatgtagg
     1741 ggcccaaggg acaatcctgg acattggtta gtgaccgggg ctaaactcta cttggataag
     1801 gggaaaatac gccttcttgt caagttttcg ttgttgaaca tatgctagat tatgaagaac
     1861 atatgaatga atatgttatg aaaagtggaa tatatagaaa atagtatgaa atgagtgagt
     1921 tttggccgta aataagtgat tctttattta tttttcaaca agtgccaaca aggtcaagga
     1981 ctcgaggtct tccgcaagtg gcatgaaatg tttatttatg taaatatata ccaaaaaact
     2041 tattatggtt actaaggtca ccaaactcct taggagtatg atcgggaatt tggtagaagt
     2101 aattgcgaac tttgtaat
//
LOCUS       XM_071830310            1961 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides MACPF domain-containing
            protein At1g14780 (LOC139840090), transcript variant X2, mRNA.
ACCESSION   XM_071830310
VERSION     XM_071830310.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1961
                     /gene="LOC139840090"
                     /note="MACPF domain-containing protein At1g14780; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840090"
     CDS             132..1691
                     /gene="LOC139840090"
                     /codon_start=1
                     /product="MACPF domain-containing protein At1g14780
                     isoform X2"
                     /protein_id="XP_071686411.1"
                     /db_xref="GeneID:139840090"
                     /translation="MSEFFNKTCSVPGKIPNGLFNAMFGFQSGSWATDAANTKFLGLD
                     GYFIMLFKVHLDRYPLILSDQVRNAVPSTWDPLALARFIENYGTHIVVGITIGGKDVI
                     MLKQNKSSPLEPSQLKNHLEDLGDQLFNGACAFSPHQPKSKELKNKTFSAFNTFFDPE
                     QMLFNGFSSSTTKNGITIMSSKRGGDLTSTMHCEWLSTVPSMPDAIAFDFIPITSLLH
                     GVPGMGFLSHAINLYLRYKPPISDLQYFLDFQAHKYWAPVHNDLSLGPTTNRAIKTPA
                     LNISLMGPKLYVNSTQVTITKKPVTGMRLYLEGMKCNRLAIHLQHLSDTPVLFQDKIS
                     EPLHWRGSEEILDPSFFEPIQWKKFSHVSTAPVKYNPEWASPEKDASFIVTGAHLHVK
                     KHDSKNILHLRLLYSRVSSSCIFRSSWTSGPLNQSHKSSFMSAISTSFLVNQDKELRS
                     SDVVVDSGIYPNGPPVEVPTQKLLKFVDMTEICRGPRDNPGHWLVTGAKLYLDKGKIR
                     LLVKFSLLNIC"
     misc_feature    183..830
                     /gene="LOC139840090"
                     /note="MAC/Perforin domain; Region: MACPF; pfam01823"
                     /db_xref="CDD:460349"
ORIGIN      
        1 ggaaaatgag cttctggtgc ctggattcgg gttgtttcaa ggcgtgtcat ccgatattaa
       61 atgtgataaa ggtgatcgtg ttcgatttca atccgatatc ctcgacttca atcaatctgt
      121 gatgctctca gatgtcggag tttttcaaca aaacatgttc agtccccgga aaaattccaa
      181 atggattgtt taatgccatg ttcgggttcc aaagtggctc gtgggctacc gatgcggcta
      241 acacgaagtt tttagggcta gatggttact tcattatgtt gtttaaggtg catctcgatc
      301 gttatccgtt gattctttct gatcaagttc gaaacgcggt tccttcaact tgggatccac
      361 ttgctcttgc aaggtttata gaaaattatg ggactcatat tgtagttggc ataactatag
      421 ggggaaaaga tgtaataatg ttgaagcaaa acaaatcttc acctttggag ccttcacaac
      481 tcaaaaatca cttggaagac ctaggagatc agttgtttaa tggggcttgc gcattctcac
      541 ctcatcaacc caaaagcaaa gaacttaaga acaagacatt ttcagctttt aacacctttt
      601 ttgacccgga acaaatgctc ttcaacggat tctcatctag cacaacaaag aatggtataa
      661 cgataatgtc ctcgaaaaga ggaggagatc ttacatcgac tatgcattgt gaatggttat
      721 caacagtacc atcaatgccc gatgccattg ctttcgactt catcccaatt acatctcttc
      781 ttcatggtgt tcccggcatg ggcttcttgt cacacgccat caatctttac cttcgttata
      841 agcctcctat tagtgatttg caatatttct tggattttca ggcccataaa tattgggctc
      901 cagttcacaa tgatctctca ttaggcccaa ctacaaatag ggccatcaaa accccagcct
      961 tgaatatcag cttgatggga cccaagctct atgttaactc cactcaggtc acaattacaa
     1021 aaaaacctgt aacaggaatg aggctatatc ttgaaggaat gaaatgcaat aggttagcta
     1081 tacaccttca acatctatca gatacacctg ttttattcca agataaaata agtgaacctt
     1141 tacattggcg cggatcagaa gaaatacttg acccgagttt ttttgaacca attcaatgga
     1201 agaagttttc gcacgtttca accgccccag taaaatacaa tcctgaatgg gcttcacctg
     1261 aaaaagatgc ctcatttatc gtcacaggcg ctcaccttca tgtcaaaaag catgattcga
     1321 agaacatttt gcatctccgg ttattatatt ctagggtatc gagctcgtgc atttttcgat
     1381 catcgtggac aagtggccca ctcaatcaat cacacaaatc gagctttatg tctgcaataa
     1441 gtacatcatt tttggtgaat caagacaaag agttaagatc ttcggatgtt gtggtcgatt
     1501 cgggtattta cccaaacggg ccaccggttg aggtaccaac acaaaaacta ttaaagtttg
     1561 ttgatatgac agaaatatgt aggggcccaa gggacaatcc tggacattgg ttagtgaccg
     1621 gggctaaact ctacttggat aaggggaaaa tacgccttct tgtcaagttt tcgttgttga
     1681 acatatgcta gattatgaag aacatatgaa tgaatatgtt atgaaaagtg gaatatatag
     1741 aaaatagtat gaaatgagtg agttttggcc gtaaataagt gattctttat ttatttttca
     1801 acaagtgcca acaaggtcaa ggactcgagg tcttccgcaa gtggcatgaa atgtttattt
     1861 atgtaaatat ataccaaaaa acttattatg gttactaagg tcaccaaact ccttaggagt
     1921 atgatcggga atttggtaga agtaattgcg aactttgtaa t
//
LOCUS       XM_071830311            1961 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides MACPF domain-containing
            protein At1g14780 (LOC139840090), transcript variant X3, mRNA.
ACCESSION   XM_071830311
VERSION     XM_071830311.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1961
                     /gene="LOC139840090"
                     /note="MACPF domain-containing protein At1g14780; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840090"
     CDS             132..1691
                     /gene="LOC139840090"
                     /codon_start=1
                     /product="MACPF domain-containing protein At1g14780
                     isoform X2"
                     /protein_id="XP_071686412.1"
                     /db_xref="GeneID:139840090"
                     /translation="MSEFFNKTCSVPGKIPNGLFNAMFGFQSGSWATDAANTKFLGLD
                     GYFIMLFKVHLDRYPLILSDQVRNAVPSTWDPLALARFIENYGTHIVVGITIGGKDVI
                     MLKQNKSSPLEPSQLKNHLEDLGDQLFNGACAFSPHQPKSKELKNKTFSAFNTFFDPE
                     QMLFNGFSSSTTKNGITIMSSKRGGDLTSTMHCEWLSTVPSMPDAIAFDFIPITSLLH
                     GVPGMGFLSHAINLYLRYKPPISDLQYFLDFQAHKYWAPVHNDLSLGPTTNRAIKTPA
                     LNISLMGPKLYVNSTQVTITKKPVTGMRLYLEGMKCNRLAIHLQHLSDTPVLFQDKIS
                     EPLHWRGSEEILDPSFFEPIQWKKFSHVSTAPVKYNPEWASPEKDASFIVTGAHLHVK
                     KHDSKNILHLRLLYSRVSSSCIFRSSWTSGPLNQSHKSSFMSAISTSFLVNQDKELRS
                     SDVVVDSGIYPNGPPVEVPTQKLLKFVDMTEICRGPRDNPGHWLVTGAKLYLDKGKIR
                     LLVKFSLLNIC"
     misc_feature    183..830
                     /gene="LOC139840090"
                     /note="MAC/Perforin domain; Region: MACPF; pfam01823"
                     /db_xref="CDD:460349"
ORIGIN      
        1 ctaaccgata tggaaaatga gcttctggtg cctggattcg ggttgtttca aggcgtgtca
       61 tccgatatta aatgtgataa aggtgatcgt gttcgatttc aatccgatat cctcgacttc
      121 aatcaagtaa gatgtcggag tttttcaaca aaacatgttc agtccccgga aaaattccaa
      181 atggattgtt taatgccatg ttcgggttcc aaagtggctc gtgggctacc gatgcggcta
      241 acacgaagtt tttagggcta gatggttact tcattatgtt gtttaaggtg catctcgatc
      301 gttatccgtt gattctttct gatcaagttc gaaacgcggt tccttcaact tgggatccac
      361 ttgctcttgc aaggtttata gaaaattatg ggactcatat tgtagttggc ataactatag
      421 ggggaaaaga tgtaataatg ttgaagcaaa acaaatcttc acctttggag ccttcacaac
      481 tcaaaaatca cttggaagac ctaggagatc agttgtttaa tggggcttgc gcattctcac
      541 ctcatcaacc caaaagcaaa gaacttaaga acaagacatt ttcagctttt aacacctttt
      601 ttgacccgga acaaatgctc ttcaacggat tctcatctag cacaacaaag aatggtataa
      661 cgataatgtc ctcgaaaaga ggaggagatc ttacatcgac tatgcattgt gaatggttat
      721 caacagtacc atcaatgccc gatgccattg ctttcgactt catcccaatt acatctcttc
      781 ttcatggtgt tcccggcatg ggcttcttgt cacacgccat caatctttac cttcgttata
      841 agcctcctat tagtgatttg caatatttct tggattttca ggcccataaa tattgggctc
      901 cagttcacaa tgatctctca ttaggcccaa ctacaaatag ggccatcaaa accccagcct
      961 tgaatatcag cttgatggga cccaagctct atgttaactc cactcaggtc acaattacaa
     1021 aaaaacctgt aacaggaatg aggctatatc ttgaaggaat gaaatgcaat aggttagcta
     1081 tacaccttca acatctatca gatacacctg ttttattcca agataaaata agtgaacctt
     1141 tacattggcg cggatcagaa gaaatacttg acccgagttt ttttgaacca attcaatgga
     1201 agaagttttc gcacgtttca accgccccag taaaatacaa tcctgaatgg gcttcacctg
     1261 aaaaagatgc ctcatttatc gtcacaggcg ctcaccttca tgtcaaaaag catgattcga
     1321 agaacatttt gcatctccgg ttattatatt ctagggtatc gagctcgtgc atttttcgat
     1381 catcgtggac aagtggccca ctcaatcaat cacacaaatc gagctttatg tctgcaataa
     1441 gtacatcatt tttggtgaat caagacaaag agttaagatc ttcggatgtt gtggtcgatt
     1501 cgggtattta cccaaacggg ccaccggttg aggtaccaac acaaaaacta ttaaagtttg
     1561 ttgatatgac agaaatatgt aggggcccaa gggacaatcc tggacattgg ttagtgaccg
     1621 gggctaaact ctacttggat aaggggaaaa tacgccttct tgtcaagttt tcgttgttga
     1681 acatatgcta gattatgaag aacatatgaa tgaatatgtt atgaaaagtg gaatatatag
     1741 aaaatagtat gaaatgagtg agttttggcc gtaaataagt gattctttat ttatttttca
     1801 acaagtgcca acaaggtcaa ggactcgagg tcttccgcaa gtggcatgaa atgtttattt
     1861 atgtaaatat ataccaaaaa acttattatg gttactaagg tcaccaaact ccttaggagt
     1921 atgatcggga atttggtaga agtaattgcg aactttgtaa t
//
LOCUS       XM_071830312            3617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histidine kinase 4-like
            (LOC139840091), mRNA.
ACCESSION   XM_071830312
VERSION     XM_071830312.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3617
                     /gene="LOC139840091"
                     /note="histidine kinase 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 35
                     Proteins"
                     /db_xref="GeneID:139840091"
     CDS             391..3297
                     /gene="LOC139840091"
                     /codon_start=1
                     /product="histidine kinase 4-like"
                     /protein_id="XP_071686413.1"
                     /db_xref="GeneID:139840091"
                     /translation="MGVNINMRGHHQFVAVSMNEQNLGTKRKYRSYIPRTNQGKYLAL
                     WIIFFWYVAINVYKWIDAGHQQRIEEGLVSMCDQRARMLQDQFSVCVNHVHALAVLVS
                     TFHYFKNPSVIDQETFAEYTARTAFERPLLSGVAYAPRLMNSERDEFEKQNGGTIRTM
                     ANKEPSPQRDEYAPVIFAQETVSYLNLLDMMSGEEDRENILRARSTGKAVLTSPFKLL
                     GSHHLGVVLTIPVYKSKLPPNASVRDRIEATAGYLGGAFDVESLVENLLGQLAGNQEI
                     IVKVYDVTNKSDPLIMYGRQTQDGDQSRSRVSMLDFGDPFRKHQMTCRYLHKEPISLT
                     AIITAFLGYVIVLLVGCMFYTGAIHIVQVEDDFDTMQKLKVRAEAADVAKSQFLATVS
                     HEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAEACGRALITLINEVLDRAKIEAGKL
                     ELQAVPFDIRSILDDVLSLFSEKSRNKGIELAVLVSDKVPQIVMGDPGRFRQVITNLV
                     GNSVKFTEKGHIFVQVHLAEHAKSVQNAKPEIGINGRFKTLSGREAADDRNNWENFKH
                     LIADDEFPFQVLTFNGTSQNVSLMVSVEDTGIGIPLHAQDLVFMPFMQADSSTSRHYG
                     GTGIGLSISKCLVELMGGQINFVSRPQIGSTFSFTAVFKRCECSNVGGENLPTAFNGL
                     KATVVDPKPVRAAVTRYHLKRLGVVVDVVNSIRTAVSGPTQPDMILVEKDVWLSSDEL
                     NNIRNVRRYGHVLKSPKMILLATDITSGEFDKAKLAGFSDTLIMKPLRASMAAACLQQ
                     VLGTKKVERGKVLGNGSVYLKSLLCGKKILVVDDNRVNRRVAAGALKKFGVEVECADS
                     GKAALDLLRIPHGFDACFMDIQMPEMDGFEATHRIRLMENQANEQQLNESEKGNWTKE
                     WHLPILAMTADVIHATFEECQKSGMDGYVSKPFQEENLYQAVAKFFETKPTTDS"
     misc_feature    727..1269
                     /gene="LOC139840091"
                     /note="CHASE domain; Region: CHASE; pfam03924"
                     /db_xref="CDD:427591"
     misc_feature    <1510..3267
                     /gene="LOC139840091"
                     /note="hybrid sensory histidine kinase BarA; Provisional;
                     Region: PRK11107"
                     /db_xref="CDD:236848"
ORIGIN      
        1 gtgctactct ttgtctcctt ccttaattcc tctaaataca tacataaagt ttttattttt
       61 attattatac tgtattcatt agggttttca gtaatacata acacaaagtt cctttggaat
      121 ttgagctttt tctgcatctt ttttgggctg caaacataac ccatgccctg ttccctcttt
      181 agttaaatct agtaattctt ttattacacc ctttttgtgt tcttgaccaa attcacacaa
      241 aacaatgttg caataatttg gttttagaaa acactttata ttttactgaa aaagttgtct
      301 gcttgaaaca aaagtactca actttattaa cttgtgggca tcaagtcttc aagaaaataa
      361 tatcaagaac ggttgaaaaa gtgaagaata atgggtgtaa atataaatat gcgagggcat
      421 catcaatttg tagcagttag tatgaatgag caaaatttgg gaacaaaaag aaagtacaga
      481 tcgtatatac caagaacaaa tcaggggaaa tatttagcat tatggataat atttttttgg
      541 tatgttgcta taaatgttta taaatggata gatgcagggc atcaacaaag aattgaagaa
      601 gggttggtga gtatgtgtga tcaaagggca agaatgttac aagatcaatt tagtgtttgt
      661 gttaatcatg ttcatgctct tgctgttttg gtttccactt ttcattattt caagaatcca
      721 tcagttattg atcaggaaac atttgcagag tatacagcaa gaacagcatt tgagagacct
      781 ttattgagtg gagtagcata tgcaccaagg ttaatgaatt cggaacggga cgaattcgag
      841 aaacaaaatg gtgggaccat aagaacaatg gccaacaagg agccttcacc tcaacgcgat
      901 gagtacgctc ccgtaatttt cgctcaagaa acagtttctt acctcaatct gctcgatatg
      961 atgtcaggcg aggaggaccg agagaatatt ttgcgggctc ggtcaactgg aaaagcagtg
     1021 ttgactagcc catttaagct tttgggctcg catcatctcg gagtagtttt gactattccg
     1081 gtttacaagt cgaagctgcc cccaaacgca tctgttcgag atcgtattga agctacagct
     1141 ggatatctcg gcggagcatt cgatgttgag tcactcgtcg aaaacctgct cggtcagctt
     1201 gcaggaaatc aagaaatcat agttaaggtt tacgatgtca ccaacaaatc cgatccgtta
     1261 atcatgtacg gtcgccagac acaagatggc gatcaatcac gttcacgggt cagcatgttg
     1321 gattttggcg acccgtttag gaaacaccag atgacgtgtc ggtaccttca taaggaacct
     1381 atctcgttaa ccgctatcat aactgcattt ttgggctatg tgattgtttt attagtcggt
     1441 tgcatgtttt atactggggc cattcatatt gttcaagttg aagatgattt cgatacaatg
     1501 cagaagttaa aagttcgtgc agaagctgct gacgtggcca aatcacagtt tcttgctacg
     1561 gtttcacatg aaattcggac tccgatgaac ggtattcttg gaatgctagc gttacttcta
     1621 gatacggatt taagttcaac gcaacgagat tacgctcaaa cggctgaagc atgcggacgg
     1681 gcgttaatca cgttaataaa cgaagtgctt gatcgggcga aaatcgaagc tggaaagttg
     1741 gaattacaag cagttccatt tgatattcgg tcaatattag atgacgttct ttcgttattt
     1801 tctgaaaagt cccgcaataa aggaatcgag ctggctgttc ttgtatctga taaagttccg
     1861 caaattgtga tgggtgatcc gggaagattc agacaagtga tcacgaatct tgttggaaat
     1921 tcggttaaat ttaccgaaaa aggacatata ttcgttcaag ttcatcttgc tgaacatgcg
     1981 aaatctgtac aaaacgcaaa acccgagatt ggtataaacg ggcgattcaa aacgttaagt
     2041 ggtcgtgaag cagcagacga tcgaaacaat tgggaaaatt tcaagcattt aattgcagac
     2101 gacgagttcc cgtttcaagt cctaacattt aacgggactt cacaaaacgt tagcttaatg
     2161 gtgtcggttg aagatacggg aatcgggatc ccgttacacg ctcaagacct cgtttttatg
     2221 ccgtttatgc aggccgacag ctcaacatcg agacattacg gaggaacggg aatcggatta
     2281 agtataagta agtgtttagt tgaacttatg ggtggtcaaa ttaacttcgt tagtcgacct
     2341 caaatcggta gcacgttttc gttcaccgct gttttcaaac gatgcgaatg tagtaacgta
     2401 ggtggtgaga atttacctac tgcgtttaat gggttgaaag cgacggttgt tgacccgaaa
     2461 cccgttcgag ctgcggtaac gagataccat ttgaaacggt taggtgtagt tgttgatgtc
     2521 gtgaatagca tacggacggc ggtttcgggt cccacacaac cggacatgat tctcgtcgaa
     2581 aaagacgtgt ggttatcgag tgacgaatta aacaacattc gtaacgttag acgatacggg
     2641 cacgtgctaa aatcgcctaa aatgatactt cttgcaacgg atatcacgag tggtgaattt
     2701 gataaggcga aattagcggg attttcggac acgttgatta tgaaaccgtt gcgagcgagt
     2761 atggcggcgg cttgtttgca acaagtgttg ggtacgaaaa aggtggagcg agggaaggtt
     2821 ttgggtaacg ggtcggttta tttaaagagt ttgctttgtg ggaagaaaat attggtggtt
     2881 gatgataata gggttaaccg aagagttgcg gccggtgcgc ttaaaaagtt tggggttgaa
     2941 gtcgagtgtg cggatagcgg taaagcggct cttgatttgc ttcggattcc gcatggtttc
     3001 gatgcgtgtt tcatggatat tcaaatgccg gaaatggacg gtttcgaggc tacacatcgt
     3061 attcggttaa tggagaacca agcaaatgaa caacaattga acgagtcaga aaaaggcaac
     3121 tggactaaag agtggcattt gccgattcta gcgatgaccg ctgatgtcat ccacgccaca
     3181 ttcgaagagt gccaaaaaag tggaatggac gggtacgtat caaaaccgtt tcaagaagaa
     3241 aatctttacc aagctgtcgc caaattcttc gaaaccaaac ccacaactga ctcgtgagac
     3301 gggaaaaaaa ataaagattt aatttcctgc aaattttgta tatttatcct gctggtttgt
     3361 gcataatggt agtatttggc aaccggttgt tgcaaaccct aacccacttt ggacctaaac
     3421 tgatttaagc agcttctcga tgaaatacgg atcgaactct taacgtgttt gtatagatgg
     3481 tttagggtag agtaagcgca cgggcgagag ttgtatcgtg tgacgcgatt gtttgtatta
     3541 atttgtcgtg tttattgata ttgataatct gttggaatca catattagat tatgcgtgta
     3601 tcattgatct tgctaat
//
LOCUS       XM_071830314             529 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides copper transport protein
            ATX1-like (LOC139840092), mRNA.
ACCESSION   XM_071830314
VERSION     XM_071830314.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..529
                     /gene="LOC139840092"
                     /note="copper transport protein ATX1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139840092"
     CDS             156..386
                     /gene="LOC139840092"
                     /codon_start=1
                     /product="copper transport protein ATX1-like"
                     /protein_id="XP_071686415.1"
                     /db_xref="GeneID:139840092"
                     /translation="MSQTVVLKVGMSCGGCVGAVKRVLGKMEGVETFDIDLEQQKVTV
                     KGNVQPDAVLQTVSKTGKKTEFWPVEGASATA"
     misc_feature    183..350
                     /gene="LOC139840092"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; Region: HMA; cd00371"
                     /db_xref="CDD:238219"
     misc_feature    order(186..194,201..203)
                     /gene="LOC139840092"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     polyA_site      529
                     /gene="LOC139840092"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttttccgttt atattctata tctaatatct atacctatat ctatcatcca ccttccgtcc
       61 attacgccca tccccactga ttcaaatcaa tacatttatt ttctatattt ttttattctc
      121 aaaatctaat caatttctca gttttctttc aaaccatgtc tcagactgtt gttcttaagg
      181 taggtatgtc atgtggcggt tgtgttggag ccgtgaaaag ggttcttggc aaaatggaag
      241 gggtggaaac ttttgacatt gatctggaac aacaaaaagt gacggtgaag ggtaatgtgc
      301 agccagatgc tgttctccag accgtttcca aaaccgggaa gaaaaccgag ttttggcccg
      361 tagaaggagc atcagctact gcttaatcac tgtgtactaa tggttcctga aacttaatat
      421 tatgatcttt aaatttgtcc ttcttttggg tgttttgctg taaatctaaa actgttaatt
      481 tggctgtaac atttggtgca tgctcatgaa taattgtttg tcttaaaga
//
LOCUS       XM_071830315            1070 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable ribose-5-phosphate
            isomerase 3, chloroplastic (LOC139840093), mRNA.
ACCESSION   XM_071830315
VERSION     XM_071830315.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1070
                     /gene="LOC139840093"
                     /note="probable ribose-5-phosphate isomerase 3,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 24 Proteins"
                     /db_xref="GeneID:139840093"
     CDS             101..943
                     /gene="LOC139840093"
                     /codon_start=1
                     /product="probable ribose-5-phosphate isomerase 3,
                     chloroplastic"
                     /protein_id="XP_071686416.1"
                     /db_xref="GeneID:139840093"
                     /translation="MSSVSLLSRPPLSSAIRHRHHISTTTFTPRRHLSIKSFSAPTPV
                     QPLTQDDLKKLAADKAVEYVSSGMVIGLGTGSTAAFVVSKIGELYSSGQLTNIVGVPT
                     SKRTYEQALSLGIPLSILDDHPKLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS
                     DKFVVVVDDSKLVSGLGGSGLAMPVEVVQFCWKYNLVRLQELFKDEGCDAKLRLDDDG
                     KPYVTDNMNYIVDLYYKTPIKDAWAAGKEISKFEGVVEHGLFLDMTTACIIAGKDGVS
                     VKSK"
     misc_feature    197..940
                     /gene="LOC139840093"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; Region: SugarP_isomerase; cl00339"
                     /db_xref="CDD:469729"
     misc_feature    order(320..322,410..412,419..424,449..451,455..457,
                     536..541,737..742,764..766,770..772,782..784)
                     /gene="LOC139840093"
                     /note="tetramer (dimer of dimers) interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:238692"
     misc_feature    order(320..322,326..331,491..496,500..502,530..541,
                     557..559,611..613)
                     /gene="LOC139840093"
                     /note="active site"
                     /db_xref="CDD:238692"
     misc_feature    order(458..460,470..472,554..556,575..577,665..670,
                     674..682,689..691,845..850,863..865)
                     /gene="LOC139840093"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238692"
     polyA_site      1070
                     /gene="LOC139840093"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttcttttt aaaaaaagac aaattaataa caacctaaaa caacaaaaat cttgaatctt
       61 gatccaaaat cacacccaca agcccctttt accggcaacc atgtcttccg tatccctcct
      121 ttcccgtcca ccactctcct ccgccatccg ccaccgtcac cacatttcca ccaccacctt
      181 caccccacgc cgtcatctct ccatcaaatc cttctcagcc ccaaccccag ttcaaccctt
      241 aacccaagac gacctcaaaa agctcgccgc cgataaagcc gtcgaatacg ttagctccgg
      301 catggtcatc ggcctcggca ccggctccac cgccgccttt gtcgtctcca aaatcggcga
      361 actttattcc tccggtcaac tcacaaacat cgttggagta cctacttcaa aaagaacata
      421 tgaacaagct ttatcattag gtatcccttt atcaattctt gatgatcacc caaaacttga
      481 tcttgcaatt gatggtgcag atgaagttga ccctgatttg aatttagtca aaggccgtgg
      541 tggcgcttta ctccgtgaga aaatggtgga agctgcatcc gataaattcg ttgttgttgt
      601 cgatgattcg aaacttgttt cgggtttagg tggaagtgga ttagcaatgc cagttgaagt
      661 agtccaattt tgctggaagt ataatttggt taggttacaa gaattgttta aagatgaagg
      721 ttgtgatgct aaattgagat tagatgatga tggtaaacct tatgtgaccg ataatatgaa
      781 ttacatcgtc gatttgtatt ataagacccc gattaaggac gcttgggctg ctggtaagga
      841 gattagtaag tttgaaggtg tggttgaaca tgggttgttt ttggatatga ctactgcttg
      901 tattattgct ggtaaagatg gtgttagtgt taagtctaag tgataaagtt gtcgacttta
      961 tgtaaatcga ttcttgtttt ttcgttaaga tgaatgtgta acattgatga gagcatgttg
     1021 ttttatgttt ctattgttaa tgtatcaaga tagagattta ttttgtgttt
//
LOCUS       XM_071830316            1377 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable ascorbate-specific
            transmembrane electron transporter 1 (LOC139840094), transcript
            variant X1, mRNA.
ACCESSION   XM_071830316
VERSION     XM_071830316.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1377
                     /gene="LOC139840094"
                     /note="probable ascorbate-specific transmembrane electron
                     transporter 1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139840094"
     CDS             632..1303
                     /gene="LOC139840094"
                     /codon_start=1
                     /product="probable ascorbate-specific transmembrane
                     electron transporter 1"
                     /protein_id="XP_071686417.1"
                     /db_xref="GeneID:139840094"
                     /translation="MAKSGSSFSVSAVPVTVFAHLLVISIAALTLVWLLKFRGGFAFN
                     SEFHKAKIFNLHPLLMTLGFLLFSGEAIIVYKTIPAARKWQKLVHLILHFIALAAGIV
                     GVYAVFKFHNESNIPNMYTLHSWIGLSTICLFAFQWLLGFFSFWYPRAEPMRRARMLP
                     WHAFFGMLIFLMTIVTVETGLTQKFIFQRLLRSQEALIINFTGLLILLFGMSVGLIVI
                     LPRRV"
     misc_feature    776..1195
                     /gene="LOC139840094"
                     /note="Plant cytochrome b(561), including the carbon
                     monoxide oxygenase ACYB-1; Region: Cyt_b561_ACYB-1_like;
                     cd08766"
                     /db_xref="CDD:176496"
     misc_feature    order(797..799,896..898,998..1000,1115..1117)
                     /gene="LOC139840094"
                     /note="putative heme binding sites [chemical binding];
                     other site"
                     /db_xref="CDD:176496"
ORIGIN      
        1 cagttgacct tcttttaagg tataacccaa aattgaacat atacttagca cattgactag
       61 tagacttaag aatcatgata atcactggag gccattaata actttacaaa gcaatactcc
      121 cacataagta tatcaacaat tgccttgaat cagggttgag attaggtcca caggaatctt
      181 gtcactcatc actatctgtt aaaatttctg ccacccttaa attcatttat ttatatttat
      241 attttatact tatttgaccg gcaaataact tttagctagg accatcatct aaaatatctt
      301 gatgctattt cctcttgtta ccgttcttgt catgaacaag agtttgttca aacagagtat
      361 atgtgacggt agatacagac aatacactaa attggcttgt tcaaacaaaa catatacaat
      421 ttgccaataa atataaataa tgatggtcaa aaaagctaaa catttccccc tttgtttact
      481 gataaaaaca aggccatata tagtttgttt tcatcgaatt atttgtgtac atgtcttttt
      541 gttaccttgt accaatacca atatatatta cctgaaacaa taataatctt gccaattcag
      601 ccttctatta ctatcttgtt gaagttcttc gatggcgaaa agtggttcga gttttagcgt
      661 gtccgcagta cctgtaaccg tttttgctca tttgttagta atatcaattg cagccctgac
      721 tctagtttgg ctcttaaagt tccgtggagg tttcgctttt aattccgagt ttcataaagc
      781 caagatattt aatttgcatc cgcttctcat gacacttgga ttcctattgt tttctggaga
      841 agctatcatc gtgtacaaga ccataccggc agcacggaaa tggcagaaac tagttcatct
      901 gatactgcat tttatcgcgc ttgctgctgg aatcgttggt gtttacgcag ttttcaagtt
      961 ccataacgaa agtaacatcc caaatatgta caccctgcat tcctggatcg gcttatcaac
     1021 catctgctta tttgctttcc agtggctact tggatttttt tctttctggt acccgcgtgc
     1081 agaaccaatg agaagggcta gaatgctgcc atggcatgcc tttttcggca tgctcatttt
     1141 tttgatgacg atagtgacgg ttgagaccgg gttgacccaa aaattcattt ttcaacgctt
     1201 actacgcagc caagaagcac ttatcatcaa ctttacagga ttgttgatac ttctttttgg
     1261 gatgtctgtt ggactaattg ttatccttcc tcggagagtc taatcagtgt tgtcattatg
     1321 tgcgtgatca ttaacgcgtt cttttgtatc gtttgtattt cttaatttac tttcgtt
//
LOCUS       XM_071830317             904 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable ascorbate-specific
            transmembrane electron transporter 1 (LOC139840094), transcript
            variant X2, mRNA.
ACCESSION   XM_071830317
VERSION     XM_071830317.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..904
                     /gene="LOC139840094"
                     /note="probable ascorbate-specific transmembrane electron
                     transporter 1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139840094"
     CDS             159..830
                     /gene="LOC139840094"
                     /codon_start=1
                     /product="probable ascorbate-specific transmembrane
                     electron transporter 1"
                     /protein_id="XP_071686418.1"
                     /db_xref="GeneID:139840094"
                     /translation="MAKSGSSFSVSAVPVTVFAHLLVISIAALTLVWLLKFRGGFAFN
                     SEFHKAKIFNLHPLLMTLGFLLFSGEAIIVYKTIPAARKWQKLVHLILHFIALAAGIV
                     GVYAVFKFHNESNIPNMYTLHSWIGLSTICLFAFQWLLGFFSFWYPRAEPMRRARMLP
                     WHAFFGMLIFLMTIVTVETGLTQKFIFQRLLRSQEALIINFTGLLILLFGMSVGLIVI
                     LPRRV"
     misc_feature    303..722
                     /gene="LOC139840094"
                     /note="Plant cytochrome b(561), including the carbon
                     monoxide oxygenase ACYB-1; Region: Cyt_b561_ACYB-1_like;
                     cd08766"
                     /db_xref="CDD:176496"
     misc_feature    order(324..326,423..425,525..527,642..644)
                     /gene="LOC139840094"
                     /note="putative heme binding sites [chemical binding];
                     other site"
                     /db_xref="CDD:176496"
ORIGIN      
        1 ttgttagtcg atttgttctt aaagagcgac tagggatggc taatggagtc gatattcatt
       61 ttggcgaact gttgcaggtt gttggctagg tgtgcttaac tttggtatca gttgaccttc
      121 ttttaagcct tctattacta tcttgttgaa gttcttcgat ggcgaaaagt ggttcgagtt
      181 ttagcgtgtc cgcagtacct gtaaccgttt ttgctcattt gttagtaata tcaattgcag
      241 ccctgactct agtttggctc ttaaagttcc gtggaggttt cgcttttaat tccgagtttc
      301 ataaagccaa gatatttaat ttgcatccgc ttctcatgac acttggattc ctattgtttt
      361 ctggagaagc tatcatcgtg tacaagacca taccggcagc acggaaatgg cagaaactag
      421 ttcatctgat actgcatttt atcgcgcttg ctgctggaat cgttggtgtt tacgcagttt
      481 tcaagttcca taacgaaagt aacatcccaa atatgtacac cctgcattcc tggatcggct
      541 tatcaaccat ctgcttattt gctttccagt ggctacttgg atttttttct ttctggtacc
      601 cgcgtgcaga accaatgaga agggctagaa tgctgccatg gcatgccttt ttcggcatgc
      661 tcattttttt gatgacgata gtgacggttg agaccgggtt gacccaaaaa ttcatttttc
      721 aacgcttact acgcagccaa gaagcactta tcatcaactt tacaggattg ttgatacttc
      781 tttttgggat gtctgttgga ctaattgtta tccttcctcg gagagtctaa tcagtgttgt
      841 cattatgtgc gtgatcatta acgcgttctt ttgtatcgtt tgtatttctt aatttacttt
      901 cgtt
//
LOCUS       XM_071830318            2553 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 65-kDa
            microtubule-associated protein 6-like (LOC139840095), mRNA.
ACCESSION   XM_071830318
VERSION     XM_071830318.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2553
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2553
                     /gene="LOC139840095"
                     /note="65-kDa microtubule-associated protein 6-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139840095"
     CDS             367..2166
                     /gene="LOC139840095"
                     /codon_start=1
                     /product="65-kDa microtubule-associated protein 6-like"
                     /protein_id="XP_071686419.1"
                     /db_xref="GeneID:139840095"
                     /translation="MLAGSPCSVRTATTCNTLLKELQQIWMDIGENEAEKDRLLIELE
                     RECLEVYRRKVDEAATAKVRLHQAVAAKEAELAALIAALGDINTHFPLTVENKSLSLK
                     AQLSMVTPLVEELKVKKDERIKQFAEIKSQIEKINSEISGYSQLVDSVSSLNIEEHDL
                     SLRKLGEYQSQLRTLQKEKSERVDKVLARVNEAHSLCNVLGSDFSETINDVHPSLYGT
                     SLEQATNISDSTLEGLENVVLKLKTEKNVRFQKLKDIAASLSELWQIMDSTMEEKGYF
                     SRITSVTRLSEADIVETAALSLEIIQQASEEVERLSKLKVSRMKELVMKRRSELEEIC
                     FKTHIEPDSSTTIDKSNAMIDSGLVDPSELLANIEAQISKVKAEALSRKEIMDRIERW
                     LSACEEENWLEDYNLDQNRYSAGRGAHLSLKRAERARITVNKIPVIVDNLICKTIAWE
                     DDRKKLFLYDGVRLVTILEEYKLTRLQKEEEKKRFKDQKKLQDLLLTERESIYGSKPS
                     PRRASSFRMAGNGYRANGNGSMTPTPRRSSVTSPTMESMTPRSYSGRQNGYSKETRRL
                     TTGPLNFVAIPKEDTISSYSSVYGSEPGSPFQN"
     misc_feature    412..1896
                     /gene="LOC139840095"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     Region: MAP65_ASE1; pfam03999"
                     /db_xref="CDD:427641"
ORIGIN      
        1 cttatcatat atccccttct tgggttttat aatttttcta ctgttttagt aaaggattta
       61 ttttggggtt cgtttattgc gcattatagc ttaatacacc ttcattcaaa gatcaaattt
      121 ttaagcaaaa gcaagatgga aagatagtgg agtttgttga aagaaacctt cagatcttgt
      181 taagcgcttt atgggttgtc actgctaaag attaacaaca acaagcaaga aagatggaaa
      241 aagacccata atttttcttg aattttagaa atgggtttca ttttgacttg aatttttttg
      301 tgttcatatt cataaaagct gtctttttta gaaagaaaaa gtggtgtaaa aggtgattaa
      361 agaacaatgt tggcaggaag tccttgtagt gtccgtacag ccactacttg caatacttta
      421 ctaaaagaac ttcagcaaat atggatggac ataggtgaaa atgaagcaga aaaagataga
      481 ctgttgattg aattggagag agagtgttta gaagtatata gaagaaaggt tgatgaggct
      541 gcaaccgcta aagtccgtct tcatcaggcg gttgccgcca aagaagccga acttgccgcc
      601 ctcatcgccg ctctcggtga cattaacact cattttccgc taaccgtgga aaacaaatct
      661 ttatcgttga aagctcaact ttcaatggtc acaccgttgg ttgaagaatt gaaagtaaag
      721 aaagacgaaa gaattaaaca atttgctgaa attaaaagtc aaattgagaa aatcaacagt
      781 gaaatttcgg gatacagtca acttgttgac tcagttagct cactaaatat cgaagaacat
      841 gatttgtctt tgagaaaact tggagaatat cagtctcagc ttcgtacact acagaaggaa
      901 aagtcagaac gggtcgataa agttttggca cgcgtgaacg aggcccattc gttgtgtaac
      961 gttcttgggt cagacttcag cgaaaccatt aatgacgtgc atccaagctt gtacggtaca
     1021 agtctagaac aagcaacaaa tataagcgat agcacattgg aaggtctcga gaacgttgta
     1081 ctgaagttga aaacagagaa gaatgtgcgg tttcagaagt tgaaagatat tgctgcatcg
     1141 ctttctgaac tttggcaaat aatggactct acaatggaag aaaagggtta tttttcaaga
     1201 attacatcgg tgactagatt atcagaagca gatattgtgg aaaccgcagc tctttcattg
     1261 gagattatac aacaggcttc agaagaagtt gagaggctga gtaaactgaa agtgagccgg
     1321 atgaaagaac tagttatgaa gaggagatct gagttggaag aaatatgctt caagactcat
     1381 atcgagcccg attcaagtac tactattgat aaatctaacg caatgataga ttctggtctg
     1441 gtggacccca gtgaactttt agcaaacatt gaagcacaaa ttagtaaagt aaaggctgaa
     1501 gctttgagtc gaaaggaaat catggatagg atcgaacgat ggctttctgc gtgtgaggag
     1561 gaaaattggc ttgaagatta taacctagat caaaatcggt atagtgctgg aagaggagct
     1621 catcttagtt taaaacgtgc tgaacgggca cgaattactg ttaacaagat tccagtaatc
     1681 gttgataatc taatatgcaa gacaattgca tgggaagatg atcgaaaaaa gttgtttctt
     1741 tatgacgggg tgcggttggt gacaattttg gaggaatata aactaactag actacaaaaa
     1801 gaggaggaaa agaagcgatt caaggaccaa aagaagcttc aagatttgct gcttacagaa
     1861 agagaatcga tttatggatc gaagcctagt ccaaggagag ctagtagttt cagaatggcg
     1921 ggtaacggat accgtgcaaa tggaaacggg tcaatgacac cgacaccacg gaggagttcg
     1981 gttacgagtc caacaatgga gtctatgaca ccacgttcat actcgggtcg tcaaaacggg
     2041 tactccaagg aaacgagaag attaactacc ggaccactta actttgtggc tataccgaaa
     2101 gaggatacga tatcatcgta ttcttctgta tatggttctg aacctgggtc tccctttcag
     2161 aactgaacat ttgaacatta ttaacaggtt ttgagtgtta attggagtag gagcagcagc
     2221 agtaagattg tgaatatatg aagaagggat gaaaggagtt tttacactac tactagtagt
     2281 agatttttaa gattgaacag tacgtacgta cgtagccaga tatataactg acactttagc
     2341 agcggcagag gtttttggtg gtttgtgacc ttttttttgt aattttgtat gttgattgtt
     2401 gagtgatgag ccttttgctg tctacttgta atttgatgtc tactattgtg tctccagatt
     2461 tgatgcagat atgtaaacta ataatctttc acttaataaa actcttccaa acaagtcatc
     2521 ttgctgcatt gctacacaat acttattgta aaa
//
LOCUS       XM_071830319            1367 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides D-galacturonate
            reductase-like (LOC139840096), mRNA.
ACCESSION   XM_071830319
VERSION     XM_071830319.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1367
                     /gene="LOC139840096"
                     /note="D-galacturonate reductase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 Proteins"
                     /db_xref="GeneID:139840096"
     CDS             51..1031
                     /gene="LOC139840096"
                     /codon_start=1
                     /product="D-galacturonate reductase-like"
                     /protein_id="XP_071686420.1"
                     /db_xref="GeneID:139840096"
                     /translation="MVTVPETMISSSDGARAIPIIALGTATESSIAGTDVVAPSTIIE
                     AIKLGYRHFDTAAIYQTEKSVGEAIAEALRLGRIKSRSELFITTKLWCDSVDRHLLVP
                     AIKNSLKNLGVEYVDLYLIHWPLKIVLEDELNFPIPSECIFPMDLKQTWEAMEECQNL
                     GLTKSIGVSNFSTNKIQQILSFAKIPPAVNQVKMNPLWQQKKLNKFCKENSILVTAYS
                     PLGAVGNNAWGHNRVMECDILKDIAKSKGKTVAQVSLRWLYEQGVSIAVKSFNTERMK
                     QNVDIFDWSLTDEELNKIDKIPQHRRIYLLGSMVLEHNDVVDEIDAELDE"
     misc_feature    96..947
                     /gene="LOC139840096"
                     /note="AKR4A and AKR4B families of aldo-keto reductase
                     (AKR); Region: AKR_AKR4A_4B; cd19124"
                     /db_xref="CDD:381350"
     misc_feature    order(120..128,210..212,225..227,315..317,414..419,
                     555..560,621..623,699..719,801..803,846..857,870..872,
                     882..884)
                     /gene="LOC139840096"
                     /note="active site"
                     /db_xref="CDD:381350"
     misc_feature    order(210..212,225..227,315..317,414..416)
                     /gene="LOC139840096"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381350"
     polyA_site      1367
                     /gene="LOC139840096"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtagccaata tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaatt atggtaacgg
       61 ttccagagac catgataagc tcttccgatg gtgctcgtgc gattcccata atcgctctgg
      121 gtacagcaac ggaatcgagc attgcaggca ctgatgtggt ggcaccatcg acgataattg
      181 aagcgattaa attgggttat cgtcactttg atacagcagc aatataccaa actgagaaat
      241 ctgttgggga agccattgca gaagctttga ggttgggtcg tattaagtct cgatctgagc
      301 tgtttattac gaccaaactg tggtgtgact cggttgatcg ccatcttctt gttccagcca
      361 tcaaaaacag tctcaagaat ctgggtgttg agtatgtaga tttgtatctg atccattggc
      421 cactcaaaat agtcctagaa gatgaattaa attttccaat tccatctgaa tgcattttcc
      481 caatggattt aaaacaaact tgggaagcaa tggaggaatg tcaaaacttg ggactcacca
      541 aatctattgg tgtcagcaat ttctctacca acaaaatcca acaaattctt tcgttcgcca
      601 aaattccgcc tgcggtcaac caggttaaga tgaacccact ttggcaacag aaaaaactca
      661 ataaattttg caaagagaat agcattcttg tcactgctta ctctccctta ggtgcggtcg
      721 gtaataacgc atggggacac aaccgtgtta tggaatgtga cattcttaag gacattgcca
      781 aatccaaagg gaaaacagtt gctcaggttt cgctaaggtg gttatacgag caaggggtga
      841 gtatcgctgt aaaaagtttt aatacggaaa ggatgaagca gaatgtcgat atctttgatt
      901 ggtctttaac tgatgaagaa ttgaacaaaa tcgacaaaat tcctcaacac agacgtattt
      961 atctacttgg gtctatggtt cttgagcata acgatgtagt agatgagatc gacgctgagc
     1021 tcgatgaatg aagtaatctg ataagcaaaa tttatgttat gtgtagatca ataagatcaa
     1081 tatgatcaat aatgattggt tgcattaata ataaatgggt taacaaatga tctgttagca
     1141 ataataatat aaattggtcc agaatatggc cgggggagaa cttgtttaac aaaataaaag
     1201 tagcaatgct atttgagaga ccactatggt ggaaggggga gagagagaga tctacattgt
     1261 ttccgacaat gagttgtata ttcattatta taactagcga tgacaatgga tcgaatatgg
     1321 atccggtgat gccgtatcca tatccatatc catttagtgt ttgttca
//
LOCUS       XM_071830320            1688 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840097), transcript variant X1, mRNA.
ACCESSION   XM_071830320
VERSION     XM_071830320.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1688
                     /gene="LOC139840097"
                     /note="uncharacterized LOC139840097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840097"
     CDS             196..1401
                     /gene="LOC139840097"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686421.1"
                     /db_xref="GeneID:139840097"
                     /translation="MEAVSRSVLVPTFQERRLSINPTPLSFKINFCCFPKINRGLFAH
                     RQVSGEDNGDEEQPLPVVNDHNNDDIGFNSLLLPASVSSSPFMNNDGYLKRMVKFLSD
                     GLSYFLKDTPTSDMVAPPSGGGGTRGGAAGLFRTPISGGVQTATSVHDLPRPALAVRN
                     LMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDAMGHPIFSFSPLAIHTRNLLADP
                     RCTLVVQIPGWSGLSNARVTIFGDVVPLPEDEQEWAHKQYIAKHQQGPSQKWGNFYYF
                     RMQNISDIYFIGGFGTVAWVNVREYEALRPDKIAVDGGEQNLKELNMIFSKPIKELLS
                     LETQVDDAALISIDSKGTDVRVRQGAQFNIQRLAFEEGHGVETLEEAKTALWNLIRRV
                     GGFDMEHKF"
     misc_feature    643..1350
                     /gene="LOC139840097"
                     /note="Putative heme iron utilization protein, contains
                     PNPOx domain [Inorganic ion transport and metabolism];
                     Region: HugZ; COG0748"
                     /db_xref="CDD:440511"
ORIGIN      
        1 gctgctgctg cggcggcgaa accttttttt tttttttttt tttttttttt tcctatttca
       61 aaataatcaa gtgtagtcca aaatcatagc cgtagcttca gtggttcaag tcgccggtat
      121 ttgaatataa taataataaa taccagtaat taatagagtc taaatataaa taaatctgta
      181 atttttgcta taatcatgga agctgtttca aggtccgtgt tggtaccaac gtttcaagaa
      241 aggcgcttat ctattaatcc aactccattg tcgtttaaaa taaatttttg ttgtttccct
      301 aaaatcaatc gaggtctttt tgctcatcgt caagtttcag gggaagataa tggagatgaa
      361 gagcaaccac tacctgttgt aaatgatcat aataatgatg atattggatt taacagttta
      421 ctactacctg cttctgtatc ttcttctcct tttatgaata atgatggata cttgaaaagg
      481 atggtcaagt ttttaagtga tggcttgtca tattttctca aggacacacc gacatcagat
      541 atggtggcac caccaagtgg gggaggagga acgagaggtg gggccgcggg gctcttcaga
      601 acccctatat ccgggggtgt gcaaactgca acctctgttc atgacttgcc tagaccagcc
      661 ttggcagtgc gtaatctcat ggaacaggct aggtttgctc acttgtgtac cgtaatgtct
      721 cggatgcatc atcgacgtga aggataccca tttggttccc tagtagactt tgcaccagac
      781 gcaatgggac atcccatatt ttccttttct cctttagcta tacacacgag gaacttatta
      841 gctgatccga ggtgtacatt ggtggtacag atacctggat ggagtggctt gtcgaatgca
      901 agagttacta tttttggcga tgttgttcct ctacctgaag atgagcagga atgggctcat
      961 aagcagtata tagcaaaaca tcaacagggg ccttcacaga aatggggaaa cttttactac
     1021 ttcagaatgc aaaatataag tgatatatat tttattggag gttttgggac ggttgcttgg
     1081 gttaatgtaa gagaatacga ggctcttcga cctgacaaga ttgctgttga tggaggcgaa
     1141 cagaacctga aggagctaaa tatgatattc tcgaagccca taaaagaact tttgtcacta
     1201 gaaacgcaag tggatgatgc agcactaata tctatagata gcaagggaac ggatgttcgt
     1261 gtacgccaag gtgcacagtt taacatacag aggttagcat ttgaagaagg acatggagtt
     1321 gaaacgctgg aggaagccaa aacagcactg tggaacttaa ttcgaagagt tggtggtttt
     1381 gacatggagc acaagtttta ggccgaccac accacaccac accacactat tctcagggtt
     1441 tggtgttttt atgcaagtgg attaaattgt cgaaagatac tactgttgta ctattctacc
     1501 atcattgctt tcccctagca aattagtgag gattgtagac agataaatgc atgtgaaaca
     1561 tcaagttgct tttaagtttt aattcgatta taatatgtac cataataatc ataatcatgg
     1621 aggattaatt aataatgtca cgagattgta agttgtagct tcactgtggg tttgcgtttt
     1681 taattaat
//
LOCUS       XM_071830321            1609 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840097), transcript variant X2, mRNA.
ACCESSION   XM_071830321
VERSION     XM_071830321.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1609
                     /gene="LOC139840097"
                     /note="uncharacterized LOC139840097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840097"
     CDS             191..1324
                     /gene="LOC139840097"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686422.1"
                     /db_xref="GeneID:139840097"
                     /translation="MEAVSRSVLVPTFQERRLSINPTPLSFKINFCCFPKINRGLFAH
                     RQVSGEDNGDEEQPLPVVNDHNNDDIGFNSLLLPASVSSSPDTPTSDMVAPPSGGGGT
                     RGGAAGLFRTPISGGVQTATSVHDLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGY
                     PFGSLVDFAPDAMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGD
                     VVPLPEDEQEWAHKQYIAKHQQGPSQKWGNFYYFRMQNISDIYFIGGFGTVAWVNVRE
                     YEALRPDKIAVDGGEQNLKELNMIFSKPIKELLSLETQVDDAALISIDSKGTDVRVRQ
                     GAQFNIQRLAFEEGHGVETLEEAKTALWNLIRRVGGFDMEHKF"
     misc_feature    566..1273
                     /gene="LOC139840097"
                     /note="Putative heme iron utilization protein, contains
                     PNPOx domain [Inorganic ion transport and metabolism];
                     Region: HugZ; COG0748"
                     /db_xref="CDD:440511"
ORIGIN      
        1 tgctgcggcg gcgaaacctt tttttttttt tttttttttt ttttttccta tttcaaaata
       61 atcaagtgta gtccaaaatc atagccgtag cttcagtggt tcaagtcgcc ggtatttgaa
      121 tataataata ataaatacca gtaattaata gagtctaaat ataaataaat ctgtaatttt
      181 tgctataatc atggaagctg tttcaaggtc cgtgttggta ccaacgtttc aagaaaggcg
      241 cttatctatt aatccaactc cattgtcgtt taaaataaat ttttgttgtt tccctaaaat
      301 caatcgaggt ctttttgctc atcgtcaagt ttcaggggaa gataatggag atgaagagca
      361 accactacct gttgtaaatg atcataataa tgatgatatt ggatttaaca gtttactact
      421 acctgcttct gtatcttctt ctcctgacac accgacatca gatatggtgg caccaccaag
      481 tgggggagga ggaacgagag gtggggccgc ggggctcttc agaaccccta tatccggggg
      541 tgtgcaaact gcaacctctg ttcatgactt gcctagacca gccttggcag tgcgtaatct
      601 catggaacag gctaggtttg ctcacttgtg taccgtaatg tctcggatgc atcatcgacg
      661 tgaaggatac ccatttggtt ccctagtaga ctttgcacca gacgcaatgg gacatcccat
      721 attttccttt tctcctttag ctatacacac gaggaactta ttagctgatc cgaggtgtac
      781 attggtggta cagatacctg gatggagtgg cttgtcgaat gcaagagtta ctatttttgg
      841 cgatgttgtt cctctacctg aagatgagca ggaatgggct cataagcagt atatagcaaa
      901 acatcaacag gggccttcac agaaatgggg aaacttttac tacttcagaa tgcaaaatat
      961 aagtgatata tattttattg gaggttttgg gacggttgct tgggttaatg taagagaata
     1021 cgaggctctt cgacctgaca agattgctgt tgatggaggc gaacagaacc tgaaggagct
     1081 aaatatgata ttctcgaagc ccataaaaga acttttgtca ctagaaacgc aagtggatga
     1141 tgcagcacta atatctatag atagcaaggg aacggatgtt cgtgtacgcc aaggtgcaca
     1201 gtttaacata cagaggttag catttgaaga aggacatgga gttgaaacgc tggaggaagc
     1261 caaaacagca ctgtggaact taattcgaag agttggtggt tttgacatgg agcacaagtt
     1321 ttaggccgac cacaccacac cacaccacac tattctcagg gtttggtgtt tttatgcaag
     1381 tggattaaat tgtcgaaaga tactactgtt gtactattct accatcattg ctttccccta
     1441 gcaaattagt gaggattgta gacagataaa tgcatgtgaa acatcaagtt gcttttaagt
     1501 tttaattcga ttataatatg taccataata atcataatca tggaggatta attaataatg
     1561 tcacgagatt gtaagttgta gcttcactgt gggtttgcgt ttttaatta
//
LOCUS       XM_071830322            1205 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides D-galacturonate
            reductase-like (LOC139840098), mRNA.
ACCESSION   XM_071830322
VERSION     XM_071830322.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1205
                     /gene="LOC139840098"
                     /note="D-galacturonate reductase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 34 Proteins"
                     /db_xref="GeneID:139840098"
     CDS             77..1048
                     /gene="LOC139840098"
                     /codon_start=1
                     /product="D-galacturonate reductase-like"
                     /protein_id="XP_071686423.1"
                     /db_xref="GeneID:139840098"
                     /translation="MVISIPETTINSSNGRQPIPLIGMGVAKSNTDSDETVKTAIIEA
                     IKVGYRHFDTAAFYGTEKPLGEAIQEALRLGLIKSRTELFITTKLWCTGTEGHLVLPA
                     IKQSLKDLGLEYVDLYLIHWPVTLKYEEFKLPIPNEWISAINLKEVWEAMEKCQNLGL
                     TKSIGVSNFAPRRIEEILSFAKIPPAVNQVEMNPIWQQKKLNEFCKKNDILLTGYSPL
                     GATGSSWGHNRVMESHVLRDIAMSGGKSVAQISLRWLYEQGVSFIVKSFNKERLKQNL
                     EIFDWSLSEEELNKISQIPQQKHIYFGMMLGEPNEVIAEVDADLSFM"
     misc_feature    131..964
                     /gene="LOC139840098"
                     /note="AKR4A and AKR4B families of aldo-keto reductase
                     (AKR); Region: AKR_AKR4A_4B; cd19124"
                     /db_xref="CDD:381350"
     misc_feature    order(149..157,233..235,248..250,338..340,437..442,
                     575..580,641..643,719..739,818..820,863..874,887..889,
                     899..901)
                     /gene="LOC139840098"
                     /note="active site"
                     /db_xref="CDD:381350"
     misc_feature    order(233..235,248..250,338..340,437..439)
                     /gene="LOC139840098"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381350"
ORIGIN      
        1 ggagtatctt ttttacaaac acactcaaca cacacacttt gtaaccaaca aaactttgaa
       61 ataaataaaa ataaagatgg taattagcat cccggagaca acaataaact ctagcaatgg
      121 tcgacagccg attcccttga ttggaatggg tgtggctaaa tcgaatactg atagcgatga
      181 aaccgtgaaa acagcgatta tcgaagcaat caaggttggt tatcggcact ttgatactgc
      241 ggctttctac gggactgaaa aacctcttgg agaagccatc caggaagctt tgagactcgg
      301 tttgataaag tcgcgaaccg agctttttat cactaccaaa ctgtggtgta ccggtaccga
      361 aggccacctg gtgttaccag ccatcaagca gagtttaaag gatttgggac ttgagtacgt
      421 agatttgtat ttaattcatt ggccagtaac ccttaaatat gaggagttca aattacctat
      481 tccaaatgaa tggatatcag ctattaatct taaagaagta tgggaagcaa tggaaaagtg
      541 tcaaaatctc ggactcacta aatccatcgg tgtaagtaac ttcgctcctc gaagaatcga
      601 agaaatcctt tccttcgcta aaatccctcc cgctgtcaac caggttgaga tgaacccaat
      661 ttggcagcag aaaaaactaa atgagttttg caaaaagaat gacatccttc tcactggtta
      721 ctcgccttta ggagcaaccg gtagttcgtg gggtcacaat cgtgtcatgg aatcacatgt
      781 tcttcgagac attgcaatgt ctggaggaaa gtccgtagct cagatttcgc taagatggtt
      841 atatgagcaa ggtgtgagct ttatagttaa gagtttcaac aaagaaagac tgaagcaaaa
      901 cttggagata tttgattggt cattgagtga agaggagttg aacaaaataa gccaaattcc
      961 tcaacagaaa catatttatt ttgggatgat gttgggtgag cctaatgaag taattgctga
     1021 ggttgatgca gatctttcat ttatgtaatt tgttatcatc ataaataaac aaaagttgtc
     1081 aagaagtttg aacagtagat attacagtat ttgtttggtt cgttgtatta tgtaaagctt
     1141 attaacaatg gcgattttgt taaaataatg atggttggtg gattagtaat aaattagaca
     1201 agttg
//
LOCUS       XM_071830323            2019 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides plant UBX domain-containing
            protein 7-like (LOC139840099), mRNA.
ACCESSION   XM_071830323
VERSION     XM_071830323.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2019
                     /gene="LOC139840099"
                     /note="plant UBX domain-containing protein 7-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840099"
     CDS             328..1677
                     /gene="LOC139840099"
                     /codon_start=1
                     /product="plant UBX domain-containing protein 7-like"
                     /protein_id="XP_071686424.1"
                     /db_xref="GeneID:139840099"
                     /translation="MEGGGVMPATDQQTMVSLFLEIAVGQTADTARQFLQATSWQLED
                     AVQLFYAGNEFGSVTAPSHVPPVENEAFTSAQSTGWGDDDVAVENVGGYNDGEVRAPL
                     PVKRDVLYDSPMHYGASRLGVYQHELDTPVPEEPKQPGIWEAEKGSTSATEASGDNNN
                     LASLYRPPFELLFHGSFEKAKEAAIGQDRWLLVNVQSTREFNSHMLNRDTWANEAVAQ
                     TITNNFVFWQVYDDAEEGSKVNTYYKLDSVPVTLVIDPVTGQKMRLWRGMIEPESLLE
                     DLLQFMDGSPKDHHFNLSNKRSRDISHTSPPKIEDETNEDDEEMRLARILSLGTMNDS
                     AEDSLKDSGVVEKSPKKDECCYPPLPEEPKGDTNLLCRVGIRLPDGRRLQRNFLRTDP
                     IKLLWSFCAANCGNEKPFRLSHAIPGAVKEMDYESTLTFEESGVANSMISVSWREVV"
     misc_feature    364..489
                     /gene="LOC139840099"
                     /note="UBA-like domain; Region: UBA_4; pfam14555"
                     /db_xref="CDD:464207"
     misc_feature    841..1179
                     /gene="LOC139840099"
                     /note="UAS family; UAS is a domain of unknown function.
                     Most members of this family are uncharacterized proteins
                     with similarity to FAS-associated factor 1 (FAF1) and ETEA
                     because of the presence of a UAS domain N-terminal to a
                     ubiquitin-associated UBX domain; Region: UAS; cd02958"
                     /db_xref="CDD:239256"
     misc_feature    1441..1656
                     /gene="LOC139840099"
                     /note="Ubiquitin regulatory domain X (UBX) structurally
                     similar to a beta-grasp ubiquitin-like fold; Region: UBX;
                     cd01767"
                     /db_xref="CDD:340466"
ORIGIN      
        1 gtctagcagg caaagaacgc accctaaact attatttgaa aatccagatt ttgatcaatt
       61 tttttttctt ctttttttta aactctttgg ctccgtataa aatgctcccc tggtgtttcg
      121 gtcgggtata aattttctat aaaatcccca aatcttagaa acccccaaaa cgaaacaaaa
      181 ataaaactgg agtttcttat ttttataatt caacctcgta tttaatctct cccatcaggg
      241 ttttaagttt gcataacttg aaagttgtga tctttattca atttttaaga aacccactaa
      301 agaaatacag tagaatctta atcggagatg gaaggtggtg gagttatgcc tgctacagac
      361 caacaaacaa tggtttcttt atttcttgaa attgcagttg gtcagactgc tgatactgcc
      421 agacaatttt tgcaggcaac aagctggcag cttgaagatg ctgttcagct cttttatgca
      481 gggaatgaat ttggatctgt tacagcacct tcgcatgttc caccggtgga aaatgaggcg
      541 ttcacgtcag ctcaaagtac ggggtggggg gacgatgacg tggcggttga aaatgttgga
      601 ggatataatg acggtgaggt tcgcgcgcct ttaccagtta aaagggatgt cctttacgac
      661 tctccaatgc attatggagc atcaagattg ggagtttatc aacatgaact cgatacacca
      721 gttcccgagg aaccgaaaca accgggaatt tgggaagcag aaaagggatc cacgtcagca
      781 actgaagctt ccggagataa taataacctt gcatccttat accgtcctcc ttttgaattg
      841 ttgttccatg gttcttttga gaaggcaaaa gaagctgcta ttggccaaga cagatggtta
      901 ctagtgaatg tccaatctac tagagaattt aactcacata tgcttaaccg ggacacatgg
      961 gccaacgaag ctgttgctca aacaatcacc aataatttcg ttttctggca ggtatacgat
     1021 gatgctgaag aaggtagcaa ggtaaacacc tactataaat tggattcggt tcccgttaca
     1081 cttgtcattg accccgtcac tggtcaaaaa atgcggttat ggcgtggaat gatcgaacca
     1141 gagagtttat tagaggatct cttacaattt atggatggta gtccaaagga tcatcatttt
     1201 aacttgtcta acaaacgttc aagagatata tctcacactt cgcctcctaa aattgaagat
     1261 gaaacaaatg aagatgatga ggaaatgagg ttggcacgaa tattatcatt gggaacgatg
     1321 aacgatagcg ctgaagactc tttaaaagac tcgggagtcg ttgaaaaatc cccgaagaaa
     1381 gacgagtgtt gttatccacc attgcctgaa gaacctaaag gtgatacgaa cttgctttgt
     1441 cgtgtcggaa ttcgtcttcc tgatggacga aggcttcaaa gaaatttctt acgcaccgat
     1501 ccaataaagt tgttgtggtc attttgtgct gcaaattgtg gaaacgagaa gccattccgt
     1561 ttaagtcatg ctattccggg ggccgtgaaa gagatggact atgagagcac gttgactttt
     1621 gaagaatctg gtgttgcgaa ttcgatgatt tcagttagtt ggagagaagt agtctaggtg
     1681 cggttcaact gtaactaacc gtgtacctgc aaatgtagtc tttctgcgtt ggtctagtat
     1741 ttatgcacat acccttttgt tgctaattat gacccaggga tggaaatgtt tttaagttgt
     1801 acgctatttt agtgctcttt tatcgaccga attgccatat aaggcagatg acctctgaaa
     1861 aggcgtatgc attgcgactt tatgagaact aagttttggt gtgtattact tcgtgtgatg
     1921 tcatatttgg tatgcaatgc ttgatttatt gtaaatgggt gttaaaaaaa cactcgagca
     1981 attatttgtt catatagaca ttaaacgtta atctgaggc
//
LOCUS       XM_071830324            1316 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ribosomal RNA-processing
            protein 8-like (LOC139840100), transcript variant X1, mRNA.
ACCESSION   XM_071830324
VERSION     XM_071830324.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1316
                     /gene="LOC139840100"
                     /note="ribosomal RNA-processing protein 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840100"
     CDS             218..1051
                     /gene="LOC139840100"
                     /codon_start=1
                     /product="ribosomal RNA-processing protein 8-like"
                     /protein_id="XP_071686425.1"
                     /db_xref="GeneID:139840100"
                     /translation="MNQEASCRNRKRKRNKRQKNETLETQQNATNAKSNVKESHCTSS
                     VSKSSQKPLSYLDKMKAKLAGGHFRMINEKLYTCSGDEALNYFKEDPSLFNMYHTGYQ
                     EQMSRWPEQPVNIIMKWLKDHSASLVVADFGCGDARLSKGVKNKVYSIDLVSNDPSVI
                     ACDMSNTPLESSSVDVAVFCLSLMGTNFPNFIQEAHRVLKTSGWLLIAEVKSRFDPTN
                     GGADPEKFSKAVCELGFTTVSKDFSNKMFILLYFKKKPKKSSSQEIKWPELKPCLYKR
                     R"
     misc_feature    392..1048
                     /gene="LOC139840100"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cl17173"
                     /db_xref="CDD:473071"
     misc_feature    order(611..625,668..673,701..709,755..757)
                     /gene="LOC139840100"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     polyA_site      1316
                     /gene="LOC139840100"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggaaaataat cctacacaaa attatgggaa aaataacccg ccgattcttt ttcactttat
       61 actagagaac cagaacggca ccggagctcc attgccgacg gccaacaatc gaatacaata
      121 acaagacttt gtcaaaagta ggttagcagt tagcaccaaa attgtaatat aaaatacgtt
      181 tgtagacaaa cttggatcgt atattgaaga aaaaacaatg aatcaggagg cgagttgtcg
      241 aaatcgaaag cgcaagagaa acaaacgcca gaagaacgaa acccttgaaa cacagcagaa
      301 tgccaccaat gccaaatcta atgtcaaaga atcgcattgt acttctagtg tttctaaaag
      361 ttcccaaaaa ccgttatcgt atcttgataa gatgaaagcg aagttagctg gaggtcattt
      421 tcgtatgatt aacgagaaac tttatacgtg ctctggggat gaagccttga attactttaa
      481 agaagatcct tcattgttta acatgtatca cacaggatat caagagcaaa tgtcacgatg
      541 gcccgaacaa ccagttaata ttatcatgaa atggctaaag gatcacagtg cctctctagt
      601 tgtggctgat tttgggtgtg gagatgcacg tctttcaaaa ggtgtaaaga ataaggtcta
      661 ttctatagac cttgtctcaa acgatccttc agtgattgct tgtgatatgt cgaatacgcc
      721 ccttgaatca tcatcagtag atgttgctgt tttctgcctt tcactaatgg gcaccaactt
      781 ccctaatttt attcaggaag cacacagagt gcttaaaaca agtggttggc ttttgatagc
      841 tgaggtgaag agtagatttg atccgactaa cggaggagca gatcccgaaa agttttctaa
      901 agctgtctgt gagctagggt ttactactgt atcaaaggac ttctcaaata agatgttcat
      961 actcctatat tttaagaaaa agccaaagaa aagttctagc caagagatta aatggcctga
     1021 actaaagcca tgcttgtaca agcgtcgctg aacgtatagc tttcttttga acctatcaaa
     1081 tgaccaggca tggttacaaa ctttattagt ttaatggtgg aaagtgccta tcacagtgtt
     1141 cctgttttac tgaaagcaat tgttgacaaa cgccttcaat ctttattttt ttttactact
     1201 tatagtttta taattataca gaactttctg tttgctattc attatacaaa gaggatttgg
     1261 tcaacttcgt taaagctgct aagactctta aaactgttgt atgttataac caaaca
//
LOCUS       XM_071830325            1328 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ribosomal RNA-processing
            protein 8-like (LOC139840100), transcript variant X2, mRNA.
ACCESSION   XM_071830325
VERSION     XM_071830325.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1328
                     /gene="LOC139840100"
                     /note="ribosomal RNA-processing protein 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840100"
     CDS             230..1063
                     /gene="LOC139840100"
                     /codon_start=1
                     /product="ribosomal RNA-processing protein 8-like"
                     /protein_id="XP_071686426.1"
                     /db_xref="GeneID:139840100"
                     /translation="MNQEASCRNRKRKRNKRQKNETLETQQNATNAKSNVKESHCTSS
                     VSKSSQKPLSYLDKMKAKLAGGHFRMINEKLYTCSGDEALNYFKEDPSLFNMYHTGYQ
                     EQMSRWPEQPVNIIMKWLKDHSASLVVADFGCGDARLSKGVKNKVYSIDLVSNDPSVI
                     ACDMSNTPLESSSVDVAVFCLSLMGTNFPNFIQEAHRVLKTSGWLLIAEVKSRFDPTN
                     GGADPEKFSKAVCELGFTTVSKDFSNKMFILLYFKKKPKKSSSQEIKWPELKPCLYKR
                     R"
     misc_feature    404..1060
                     /gene="LOC139840100"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cl17173"
                     /db_xref="CDD:473071"
     misc_feature    order(623..637,680..685,713..721,767..769)
                     /gene="LOC139840100"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     polyA_site      1328
                     /gene="LOC139840100"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aataatccta cacaaaatta tgggaaaaat aacccgccga ttctttttca ctttatacta
       61 gagaaccaga acggcaccgg agctccattg ccgacggcca acaatcgaat acaataacaa
      121 gactttgtca aaactttatt tatgtgtagg taggttagca gttagcacca aaattgtaat
      181 ataaaatacg tttgtagaca aacttggatc gtatattgaa gaaaaaacaa tgaatcagga
      241 ggcgagttgt cgaaatcgaa agcgcaagag aaacaaacgc cagaagaacg aaacccttga
      301 aacacagcag aatgccacca atgccaaatc taatgtcaaa gaatcgcatt gtacttctag
      361 tgtttctaaa agttcccaaa aaccgttatc gtatcttgat aagatgaaag cgaagttagc
      421 tggaggtcat tttcgtatga ttaacgagaa actttatacg tgctctgggg atgaagcctt
      481 gaattacttt aaagaagatc cttcattgtt taacatgtat cacacaggat atcaagagca
      541 aatgtcacga tggcccgaac aaccagttaa tattatcatg aaatggctaa aggatcacag
      601 tgcctctcta gttgtggctg attttgggtg tggagatgca cgtctttcaa aaggtgtaaa
      661 gaataaggtc tattctatag accttgtctc aaacgatcct tcagtgattg cttgtgatat
      721 gtcgaatacg ccccttgaat catcatcagt agatgttgct gttttctgcc tttcactaat
      781 gggcaccaac ttccctaatt ttattcagga agcacacaga gtgcttaaaa caagtggttg
      841 gcttttgata gctgaggtga agagtagatt tgatccgact aacggaggag cagatcccga
      901 aaagttttct aaagctgtct gtgagctagg gtttactact gtatcaaagg acttctcaaa
      961 taagatgttc atactcctat attttaagaa aaagccaaag aaaagttcta gccaagagat
     1021 taaatggcct gaactaaagc catgcttgta caagcgtcgc tgaacgtata gctttctttt
     1081 gaacctatca aatgaccagg catggttaca aactttatta gtttaatggt ggaaagtgcc
     1141 tatcacagtg ttcctgtttt actgaaagca attgttgaca aacgccttca atctttattt
     1201 ttttttacta cttatagttt tataattata cagaactttc tgtttgctat tcattataca
     1261 aagaggattt ggtcaacttc gttaaagctg ctaagactct taaaactgtt gtatgttata
     1321 accaaaca
//
LOCUS       XM_071830326            1312 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ribosomal RNA-processing
            protein 8-like (LOC139840100), transcript variant X3, mRNA.
ACCESSION   XM_071830326
VERSION     XM_071830326.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1312
                     /gene="LOC139840100"
                     /note="ribosomal RNA-processing protein 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840100"
     CDS             214..1047
                     /gene="LOC139840100"
                     /codon_start=1
                     /product="ribosomal RNA-processing protein 8-like"
                     /protein_id="XP_071686427.1"
                     /db_xref="GeneID:139840100"
                     /translation="MNQEASCRNRKRKRNKRQKNETLETQQNATNAKSNVKESHCTSS
                     VSKSSQKPLSYLDKMKAKLAGGHFRMINEKLYTCSGDEALNYFKEDPSLFNMYHTGYQ
                     EQMSRWPEQPVNIIMKWLKDHSASLVVADFGCGDARLSKGVKNKVYSIDLVSNDPSVI
                     ACDMSNTPLESSSVDVAVFCLSLMGTNFPNFIQEAHRVLKTSGWLLIAEVKSRFDPTN
                     GGADPEKFSKAVCELGFTTVSKDFSNKMFILLYFKKKPKKSSSQEIKWPELKPCLYKR
                     R"
     misc_feature    388..1044
                     /gene="LOC139840100"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cl17173"
                     /db_xref="CDD:473071"
     misc_feature    order(607..621,664..669,697..705,751..753)
                     /gene="LOC139840100"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     polyA_site      1312
                     /gene="LOC139840100"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggaaaataat cctacacaaa attatgggaa aaataacccg ccgattcttt ttcactttat
       61 actagagaac cagaacggca ccggagctcc attgccgacg gccaacaatc gaatacaata
      121 acaagacttt gtcaaaagtt agcagttagc accaaaattg taatataaaa tacgtttgta
      181 gacaaacttg gatcgtatat tgaagaaaaa acaatgaatc aggaggcgag ttgtcgaaat
      241 cgaaagcgca agagaaacaa acgccagaag aacgaaaccc ttgaaacaca gcagaatgcc
      301 accaatgcca aatctaatgt caaagaatcg cattgtactt ctagtgtttc taaaagttcc
      361 caaaaaccgt tatcgtatct tgataagatg aaagcgaagt tagctggagg tcattttcgt
      421 atgattaacg agaaacttta tacgtgctct ggggatgaag ccttgaatta ctttaaagaa
      481 gatccttcat tgtttaacat gtatcacaca ggatatcaag agcaaatgtc acgatggccc
      541 gaacaaccag ttaatattat catgaaatgg ctaaaggatc acagtgcctc tctagttgtg
      601 gctgattttg ggtgtggaga tgcacgtctt tcaaaaggtg taaagaataa ggtctattct
      661 atagaccttg tctcaaacga tccttcagtg attgcttgtg atatgtcgaa tacgcccctt
      721 gaatcatcat cagtagatgt tgctgttttc tgcctttcac taatgggcac caacttccct
      781 aattttattc aggaagcaca cagagtgctt aaaacaagtg gttggctttt gatagctgag
      841 gtgaagagta gatttgatcc gactaacgga ggagcagatc ccgaaaagtt ttctaaagct
      901 gtctgtgagc tagggtttac tactgtatca aaggacttct caaataagat gttcatactc
      961 ctatatttta agaaaaagcc aaagaaaagt tctagccaag agattaaatg gcctgaacta
     1021 aagccatgct tgtacaagcg tcgctgaacg tatagctttc ttttgaacct atcaaatgac
     1081 caggcatggt tacaaacttt attagtttaa tggtggaaag tgcctatcac agtgttcctg
     1141 ttttactgaa agcaattgtt gacaaacgcc ttcaatcttt attttttttt actacttata
     1201 gttttataat tatacagaac tttctgtttg ctattcatta tacaaagagg atttggtcaa
     1261 cttcgttaaa gctgctaaga ctcttaaaac tgttgtatgt tataaccaaa ca
//
LOCUS       XM_071830327            1265 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ribosomal RNA-processing
            protein 8-like (LOC139840100), transcript variant X4, mRNA.
ACCESSION   XM_071830327
VERSION     XM_071830327.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1265
                     /gene="LOC139840100"
                     /note="ribosomal RNA-processing protein 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840100"
     CDS             167..1000
                     /gene="LOC139840100"
                     /codon_start=1
                     /product="ribosomal RNA-processing protein 8-like"
                     /protein_id="XP_071686428.1"
                     /db_xref="GeneID:139840100"
                     /translation="MNQEASCRNRKRKRNKRQKNETLETQQNATNAKSNVKESHCTSS
                     VSKSSQKPLSYLDKMKAKLAGGHFRMINEKLYTCSGDEALNYFKEDPSLFNMYHTGYQ
                     EQMSRWPEQPVNIIMKWLKDHSASLVVADFGCGDARLSKGVKNKVYSIDLVSNDPSVI
                     ACDMSNTPLESSSVDVAVFCLSLMGTNFPNFIQEAHRVLKTSGWLLIAEVKSRFDPTN
                     GGADPEKFSKAVCELGFTTVSKDFSNKMFILLYFKKKPKKSSSQEIKWPELKPCLYKR
                     R"
     misc_feature    341..997
                     /gene="LOC139840100"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
                     cl17173"
                     /db_xref="CDD:473071"
     misc_feature    order(560..574,617..622,650..658,704..706)
                     /gene="LOC139840100"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     polyA_site      1265
                     /gene="LOC139840100"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaataatcct acacaaaatt atgggaaaaa taacccgccg attctttttc actttatact
       61 agagaaccag aacggcaccg gagctccatt gccgacggcc aacaatcgaa tacaataaca
      121 agactttgtc aaaaacaaac ttggatcgta tattgaagaa aaaacaatga atcaggaggc
      181 gagttgtcga aatcgaaagc gcaagagaaa caaacgccag aagaacgaaa cccttgaaac
      241 acagcagaat gccaccaatg ccaaatctaa tgtcaaagaa tcgcattgta cttctagtgt
      301 ttctaaaagt tcccaaaaac cgttatcgta tcttgataag atgaaagcga agttagctgg
      361 aggtcatttt cgtatgatta acgagaaact ttatacgtgc tctggggatg aagccttgaa
      421 ttactttaaa gaagatcctt cattgtttaa catgtatcac acaggatatc aagagcaaat
      481 gtcacgatgg cccgaacaac cagttaatat tatcatgaaa tggctaaagg atcacagtgc
      541 ctctctagtt gtggctgatt ttgggtgtgg agatgcacgt ctttcaaaag gtgtaaagaa
      601 taaggtctat tctatagacc ttgtctcaaa cgatccttca gtgattgctt gtgatatgtc
      661 gaatacgccc cttgaatcat catcagtaga tgttgctgtt ttctgccttt cactaatggg
      721 caccaacttc cctaatttta ttcaggaagc acacagagtg cttaaaacaa gtggttggct
      781 tttgatagct gaggtgaaga gtagatttga tccgactaac ggaggagcag atcccgaaaa
      841 gttttctaaa gctgtctgtg agctagggtt tactactgta tcaaaggact tctcaaataa
      901 gatgttcata ctcctatatt ttaagaaaaa gccaaagaaa agttctagcc aagagattaa
      961 atggcctgaa ctaaagccat gcttgtacaa gcgtcgctga acgtatagct ttcttttgaa
     1021 cctatcaaat gaccaggcat ggttacaaac tttattagtt taatggtgga aagtgcctat
     1081 cacagtgttc ctgttttact gaaagcaatt gttgacaaac gccttcaatc tttatttttt
     1141 tttactactt atagttttat aattatacag aactttctgt ttgctattca ttatacaaag
     1201 aggatttggt caacttcgtt aaagctgcta agactcttaa aactgttgta tgttataacc
     1261 aaaca
//
LOCUS       XM_071830328            1390 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            ribulose-5-phosphate-3-epimerase, chloroplastic-like
            (LOC139840101), mRNA.
ACCESSION   XM_071830328
VERSION     XM_071830328.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1390
                     /gene="LOC139840101"
                     /note="ribulose-5-phosphate-3-epimerase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 Proteins"
                     /db_xref="GeneID:139840101"
     CDS             241..1089
                     /gene="LOC139840101"
                     /codon_start=1
                     /product="ribulose-5-phosphate-3-epimerase,
                     chloroplastic-like"
                     /protein_id="XP_071686429.1"
                     /db_xref="GeneID:139840101"
                     /translation="MTTASSLSLSTLIQSQINGFGKVLKHSVFQPTSVSYTTRRAIRT
                     VVKASRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNIT
                     IGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVN
                     QIKSLGAKAGVVLNPATPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR
                     RMCVEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASTR
                     PVAVHA"
     misc_feature    394..1086
                     /gene="LOC139840101"
                     /note="ribulose-phosphate 3-epimerase; Region: PLN02334"
                     /db_xref="CDD:215192"
     misc_feature    order(430..432,436..438,511..513,610..612,835..840,
                     844..849,937..939,943..945,1003..1008)
                     /gene="LOC139840101"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238244"
     misc_feature    order(451..453,460..462,520..522,526..531,535..537,
                     541..552,619..621,631..633,700..702,706..711,763..765,
                     772..774,778..780,790..792,832..834,859..861,865..867,
                     877..879)
                     /gene="LOC139840101"
                     /note="hexamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238244"
     misc_feature    order(505..507,511..513,604..606,937..939)
                     /gene="LOC139840101"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:238244"
     polyA_site      1390
                     /gene="LOC139840101"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttgctgtgt tcgtaccaca cctcattgaa accaaccatt atgtagataa taagcaaacc
       61 caattttgtg tccgacacat atcattccca tagttatctt tcaatccata ctctattccc
      121 aaaaatctct caattttaga atcaatcttt aaacattttg cagttgatac acaaaagatc
      181 gaaccttttt gatattatac ccacccacca actatttgat aaaaggtttc acctgaaaca
      241 atgacaactg cttcttcttt gagtttatca actcttattc aatcacagat taatgggttt
      301 ggtaaggttt taaaacattc tgtttttcaa cccacttcag tttcttatac aacaaggaga
      361 gctattagaa ccgtcgtgaa agcttctcgg gttgataaat tctcaaagag tgatatcatt
      421 gtttccccat caattctttc tgcaaacttc gcgaagttag gagaacaggt taaggctgta
      481 gaattggcag ggtgcgattg gattcacgtt gatgttatgg atggacgttt tgtacctaat
      541 attacaatcg gacctcttgt tgtggatgca ttgaggccgg ttacagatct cccgttggac
      601 gtgcatttga tgattgttga acccgagcaa cgagtgcccg actttataaa agctggagca
      661 gacatagtca gtgtccattg tgaacaatct tcaactatac atttacaccg tactgttaat
      721 caaataaaaa gtcttggagc caaagctgga gtggtgctaa accctgctac accattatcg
      781 acaatagaat acgtcctcga tgtggttgat ctggtgttga ttatgtctgt gaatcctgga
      841 tttggtggtc aaagttttat tgagagccaa gtgaagaaga tatcagactt gagaagaatg
      901 tgtgttgaaa agggtgtgaa cccatggatt gaagtagacg gtggagttac tcctgccaat
      961 gcatataagg ttatagaagc tggcgcaaat gctttggttg ctggttctgc tgtttttgga
     1021 gctaaagatt atgctgaagc aataaagggt atcaaagcca gcacaagacc cgtagcggtt
     1081 catgcttaaa ctttcctgct acgaaagtga ttcagcctgc gttatctgta caataggagg
     1141 aaattgatgg ctgatacttt tcttttgtat cttgctactg taacattcat cgtttgctgt
     1201 tgctgaaaga tgtacaaata aggtccattt gtaagtgaca aaaggtactt gtgtagcatc
     1261 gtcatattga agcgtaaata agtttggttc aatgtatcct agaatttatt agcagcaaac
     1321 atacaggaat atgaaaaaaa tatcagtaat gtttcaatct tcatattgag acatcattat
     1381 atgattctaa
//
LOCUS       XM_071830329            2113 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides leucine-rich repeat
            receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
            (LOC139840102), mRNA.
ACCESSION   XM_071830329
VERSION     XM_071830329.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2113
                     /gene="LOC139840102"
                     /note="leucine-rich repeat receptor-like
                     serine/threonine/tyrosine-protein kinase SOBIR1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139840102"
     CDS             30..1949
                     /gene="LOC139840102"
                     /codon_start=1
                     /product="leucine-rich repeat receptor-like
                     serine/threonine/tyrosine-protein kinase SOBIR1"
                     /protein_id="XP_071686430.1"
                     /db_xref="GeneID:139840102"
                     /translation="MATITHLTLLMFLTLTLTIQAKINLNIADHRALSTVLDSLGVSG
                     NLRRPENLCNTAGISCERRVVNNSYTLKVTRLVFNSQRLSGFISPAIGHLPELKELSL
                     PNNYLDNHIPTQIVKCRKLEVFDISNNSFSGKVPDEISSLIRLRVLDLSFNEFSGELR
                     FLKSFPNLEKLSLENNLFSGRVPVSLRSFRNLRFFNVSGNSLLEGPLPILKQFESPIK
                     SKSKNVPKRYIFAEVTNSSANETNTGVGLSNVQAPALAPGPVEALAPGPAQAPIHKHK
                     KSTRRKIMGWVLGFLVGTFAGLITSMIFSLLFKLVMIMIKGGDNNSGRAIFSQSIKAK
                     DLEFLEDDDAVAQLQVIGRGGCGEVYKTDIPDGKIKTIAIKKIIQPSKGAVELTAEDT
                     KTLNKKMRQIRSEIQTVGQIRHRNLVPLLAHVSRPTCHYLVYEFMKNGSLQDILQQVQ
                     DGTRELEWLTRHKIAIGVVSGLEYLHFNHTPRIVHRDLKPGNVLLDDDMEARIADFGL
                     AKSIPEADTHMTSSNVAGTLGYIAPEYHQTMKFTDKCDIYSFGVLLGVLVMGKFPSDE
                     FFQHTHEVNLVKWMRNVMTSDDPQQAIDSSLRGNGYEEQMLLVLKIACFCTLDNPKER
                     PNSKDCRMMLAQIEH"
     misc_feature    <96..1916
                     /gene="LOC139840102"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    249..317
                     /gene="LOC139840102"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    318..389
                     /gene="LOC139840102"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    390..461
                     /gene="LOC139840102"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    462..530
                     /gene="LOC139840102"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    531..605
                     /gene="LOC139840102"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1080..1940
                     /gene="LOC139840102"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1080..1091,1098..1100,1104..1106,1179..1181,
                     1185..1187,1281..1283,1329..1340,1488..1490,1500..1505,
                     1509..1511,1539..1544)
                     /gene="LOC139840102"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     polyA_site      2113
                     /gene="LOC139840102"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatttattct cctcccttaa ccaccacaaa tggccaccat cacccacctc acactactca
       61 tgttcctcac cttaacactc acaattcaag ctaaaataaa tctcaatatc gccgaccacc
      121 gcgctctttc cacagttctg gacagtctgg gcgtctccgg caacctccgg cgaccggaaa
      181 atctttgcaa caccgccgga atttcatgtg aacggagggt tgtaaacaat tcatacaccc
      241 tcaaagtcac cagattagtg tttaattctc aacggttaag cgggtttatc tcgccggcga
      301 tcgggcactt accggaactt aaagaactat ctttaccgaa caattatctt gacaatcata
      361 tcccaacaca aatcgtcaaa tgtcgaaaac tcgaagtttt cgacattagt aacaacagtt
      421 tttcgggtaa agttcccgac gaaatatcgt ccttaattcg tcttcgagtc ctcgatctct
      481 cttttaatga attttccggc gaattacggt ttctgaaatc cttccccaac ctcgaaaaac
      541 tatcactcga gaacaacttg ttttcgggta gagtaccggt gtctttacgt tcatttcgca
      601 accttcggtt ttttaacgtc tcgggcaata gtttgttaga aggcccgttg cccattttga
      661 agcagtttga atctcctatt aaatcgaaaa gtaaaaatgt tcccaaacgt tatatattcg
      721 ctgaagtcac aaattcttca gcgaatgaaa cgaatactgg tgttggttta agtaatgtac
      781 aagccccagc cctggccccg ggccccgttg aggccctggc cccaggacct gctcaggccc
      841 caatccataa gcataaaaag agtactagaa ggaaaattat ggggtgggtt cttggatttt
      901 tggtaggaac atttgctggg cttattactt ctatgatatt ttcgcttttg tttaagttgg
      961 tgatgataat gattaaaggt ggtgataaca attcgggccg ggccattttt agtcaatcga
     1021 taaaggcaaa agacctcgag tttcttgaag atgatgatgc ggttgctcag ttacaagtaa
     1081 tcggaagagg tggttgtgga gaggtgtata aaaccgatat acccgatgga aagatcaaaa
     1141 cgatcgcgat taagaagatc atacaacctt cgaaaggcgc ggtcgagctc actgcagagg
     1201 acaccaaaac tctcaacaaa aagatgaggc aaattcggtc tgaaattcaa acggtcgggc
     1261 aaattcgaca ccgaaattta gtaccattac tagcccatgt ttctcgtcct acttgtcatt
     1321 acttagttta cgagtttatg aaaaacggaa gcttacaaga cattttacaa caagttcaag
     1381 acggtacacg agaattagag tggctcacga ggcataagat tgcaataggt gttgtatccg
     1441 ggctcgagta tctacatttt aaccatacgc ctcgtatagt ccatcgagac ttaaaaccgg
     1501 gtaacgtact ccttgatgat gatatggagg cccgaattgc tgatttcggg cttgctaaat
     1561 cgatccctga agctgataca catatgacaa gttctaatgt tgcgggtact ctagggtaca
     1621 ttgcacccga atatcatcaa acgatgaaat ttacggataa atgtgacatc tatagttttg
     1681 gggtgttatt aggtgttttg gtcatgggta agtttccgtc cgacgagttt ttccagcata
     1741 cgcatgaggt aaacttggtg aaatggatga ggaacgtaat gacatccgat gatccacagc
     1801 aagcgattga ttcgagtctt aggggaaacg ggtacgagga acaaatgctt cttgttctta
     1861 agattgcttg tttttgtaca cttgataatc ctaaagagag gcctaatagt aaagattgta
     1921 ggatgatgtt ggctcaaatt gagcattgat acatgtatga tcaagaagga acctcaacca
     1981 agtttgtgtt atgttatatt ttggacttgt atcatgttta ggtttgactg tttcaatatg
     2041 ttctaagtta ttgtatggtg tcaatttatg atatgaaata ctatgaaata tctctactag
     2101 aaatttgact aaa
//
LOCUS       XR_011757234            1438 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840103), transcript variant X1, ncRNA.
ACCESSION   XR_011757234
VERSION     XR_011757234.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1438
                     /gene="LOC139840103"
                     /note="uncharacterized LOC139840103; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840103"
     ncRNA           1..1438
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840103"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840103"
ORIGIN      
        1 gctactcacg tcaaatcatc atcattagta gtgttgttgc tgtcagaaac ccagttccat
       61 ttcatcaggt tcgtcggaaa ctctcatccc ttacaactat tttccgttgg tatatcgaac
      121 cctgaacttg atatacgtga tgttgatttt gaaaaaggaa gcactaattg caactgtttt
      181 gcaagttttt taagttaaca ataaagcaaa ataataatta atgtgcgttt gtgttttgtg
      241 ttttgtttgt tgttcttctc cttatttgat ttgatttcta atttttctct tgcaataata
      301 tgtgcatctg tatacaaata tttgcaatac tatatatttt aaactttatg tttttattta
      361 tataaaagaa cgggtgtata agtataactt cacaatttgg gtttaataag caaactcaca
      421 atatataata actgaaggtc gaatttatag gttcttcaac attaaggtaa agcgttttct
      481 gtgttgttat tctagcatac cgtgctaatc gtttaacttt tattttgtgt ttttttaatg
      541 aatcagttgt ggcatgtttt taagttcatc tgaagataaa acagggatat tcgatcaaat
      601 tgagaagaaa atagaaagag ctacaatgtt ccctagaagt catggagagg tattcagatt
      661 aaagtaccat aaagagattt tcggattcac tttttagcca tcaacgtttt aaggtatgag
      721 atcaggcaga ggtacaattc agtataattc acattatgat gctttcaacc ctaccgtaaa
      781 cgattcacaa aagtgtcaac gggaacagaa aatagaacct ataatatctt cagactggtg
      841 ctatgaagga tgtccgacat gcaaaagaac gctaatcgga aacccaactg atctcgaatg
      901 ccccgactac aacatcaaag atgactacgg aggctaatat ttcccctggt tagtacatat
      961 acaaaaacct tttaaaataa aacaaattta tgatattcta caggtgttaa tctatggttg
     1021 ctgctcatcg atacctaagg caacttatca tctacttatt tgattggttt tgataaaggg
     1081 gtcatcaact ttcaatgggc ataggggata ccatcagagc cggtgatgta caattaattg
     1141 atcaaacttt tgagtaactc gcttaaacga attagggtga aaatgggtta ttttcagcta
     1201 acttttgatt ttctaaagtt ttatacttca ttgtatttat attaatggag taaagagctg
     1261 gtggactttc tcttatgtga gtggaaaatt atttaaccct tcttcatttt aaataaatac
     1321 ctcattaaag ggtaaacatc aatgacgtta ttgtcaattc acaactacct taaattatta
     1381 gtgtcgttta acactctatg agaaacacgt caaacaactt acgacttaca tcctattc
//
LOCUS       XR_011757235             966 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840103), transcript variant X2, ncRNA.
ACCESSION   XR_011757235
VERSION     XR_011757235.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139840103"
                     /note="uncharacterized LOC139840103; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840103"
     ncRNA           1..966
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840103"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840103"
ORIGIN      
        1 tttcaggcta ctcacgtcaa atcatcatca ttagtagtgt tgttgctgtc agaaacccag
       61 ttccatttca tcagttgtgg catgttttta agttcatctg aagataaaac agggatattc
      121 gatcaaattg agaagaaaat agaaagagct acaatgttcc ctagaagtca tggagaggta
      181 ttcagattaa agtaccataa agagattttc ggattcactt tttagccatc aacgttttaa
      241 ggtatgagat caggcagagg tacaattcag tataattcac attatgatgc tttcaaccct
      301 accgtaaacg attcacaaaa gtgtcaacgg gaacagaaaa tagaacctat aatatcttca
      361 gactggtgct atgaaggatg tccgacatgc aaaagaacgc taatcggaaa cccaactgat
      421 ctcgaatgcc ccgactacaa catcaaagat gactacggag gctaatattt cccctggtta
      481 gtacatatac aaaaaccttt taaaataaaa caaatttatg atattctaca ggtgttaatc
      541 tatggttgct gctcatcgat acctaaggca acttatcatc tacttatttg attggttttg
      601 ataaaggggt catcaacttt caatgggcat aggggatacc atcagagccg gtgatgtaca
      661 attaattgat caaacttttg agtaactcgc ttaaacgaat tagggtgaaa atgggttatt
      721 ttcagctaac ttttgatttt ctaaagtttt atacttcatt gtatttatat taatggagta
      781 aagagctggt ggactttctc ttatgtgagt ggaaaattat ttaacccttc ttcattttaa
      841 ataaatacct cattaaaggg taaacatcaa tgacgttatt gtcaattcac aactacctta
      901 aattattagt gtcgtttaac actctatgag aaacacgtca aacaacttac gacttacatc
      961 ctattc
//
LOCUS       XR_011757236            1477 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840103), transcript variant X3, ncRNA.
ACCESSION   XR_011757236
VERSION     XR_011757236.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1477
                     /gene="LOC139840103"
                     /note="uncharacterized LOC139840103; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840103"
     ncRNA           1..1477
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840103"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840103"
ORIGIN      
        1 gctactcacg tcaaatcatc atcattagta gtgttgttgc tgtcagaaac ccagttccat
       61 ttcatcaggt tcgtcggaaa ctctcatccc ttacaactat tttccgttgg tatatcgaac
      121 cctgaacttg atatacgtga tgttgatttt gaaaaaggaa gcactaattg caactgtttt
      181 gcaagttttt taagttaaca ataaagcaaa ataataatta atgtgcgttt gtgttttgtg
      241 ttttgtttgt tgttcttctc cttatttgat ttgatttcta atttttctct tgcaataata
      301 tgtgcatctg tatacaaata tttgcaatac tatatatttt aaactttatg tttttattta
      361 tataaaagaa cgggtgtata agtataactt cacaatttgg gtttaataag caaactcaca
      421 atatataata actgaaggtc gaatttatag gttcttcaac attaaggtaa agcgttttct
      481 gtgttgttat tctagcatac cgtgctaatc gtttaacttt tattttgtgt ttttttaatg
      541 aatcagttgt ggcatgtttt taagttcatc tgaagataaa acagggatat tcgatcaaat
      601 tgagaagaaa atagaaagag ctacaatgtt ccctagaagt catggagagg tattcagatt
      661 aaagtaccat aaagagattt tcggattcac tttttagcca tcaacgtttt aaggtatgag
      721 atcaggcaga ggtacaattc agtataattc acattatgat gctttcaacc ctaccgtaaa
      781 cgattcacaa aagtgtcaac gggaacttta gatggcacct gcagttttta tgatatcata
      841 ggaacagaaa atagaaccta taatatcttc agactggtgc tatgaaggat gtccgacatg
      901 caaaagaacg ctaatcggaa acccaactga tctcgaatgc cccgactaca acatcaaaga
      961 tgactacgga ggctaatatt tcccctggtt agtacatata caaaaacctt ttaaaataaa
     1021 acaaatttat gatattctac aggtgttaat ctatggttgc tgctcatcga tacctaaggc
     1081 aacttatcat ctacttattt gattggtttt gataaagggg tcatcaactt tcaatgggca
     1141 taggggatac catcagagcc ggtgatgtac aattaattga tcaaactttt gagtaactcg
     1201 cttaaacgaa ttagggtgaa aatgggttat tttcagctaa cttttgattt tctaaagttt
     1261 tatacttcat tgtatttata ttaatggagt aaagagctgg tggactttct cttatgtgag
     1321 tggaaaatta tttaaccctt cttcatttta aataaatacc tcattaaagg gtaaacatca
     1381 atgacgttat tgtcaattca caactacctt aaattattag tgtcgtttaa cactctatga
     1441 gaaacacgtc aaacaactta cgacttacat cctattc
//
LOCUS       XR_011757237            1390 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840103), transcript variant X4, ncRNA.
ACCESSION   XR_011757237
VERSION     XR_011757237.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1390
                     /gene="LOC139840103"
                     /note="uncharacterized LOC139840103; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840103"
     ncRNA           1..1390
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840103"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840103"
ORIGIN      
        1 gctactcacg tcaaatcatc atcattagta gtgttgttgc tgtcagaaac ccagttccat
       61 ttcatcaggt tcgtcggaaa ctctcatccc ttacaactat tttccgttgg tatatcgaac
      121 cctgaacttg atatacgtga tgttgatttt gaaaaaggaa gcactaattg caactgtttt
      181 gcaagttttt taagttaaca ataaagcaaa ataataatta atgtgcgttt gtgttttgtg
      241 ttttgtttgt tgttcttctc cttatttgat ttgatttcta atttttctct tgcaataata
      301 tgtgcatctg tatacaaata tttgcaatac tatatatttt aaactttatg tttttattta
      361 tataaaagaa cgggtgtata agtataactt cacaatttgg gtttaataag caaactcaca
      421 atatataata actgaaggtc gaatttatag gttcttcaac attaaggtaa agcgttttct
      481 gtgttgttat tctagcatac cgtgctaatc gtttaacttt tattttgtgt ttttttaatg
      541 aatcagttgt ggcatgtttt taagttcatc tgaagataaa acagggatat tcgatcaaat
      601 tgagaagaaa atagaaagag ctacaatgtt ccctagaagt catggagagc catcaacgtt
      661 ttaaggtatg agatcaggca gaggtacaat tcagtataat tcacattatg atgctttcaa
      721 ccctaccgta aacgattcac aaaagtgtca acgggaacag aaaatagaac ctataatatc
      781 ttcagactgg tgctatgaag gatgtccgac atgcaaaaga acgctaatcg gaaacccaac
      841 tgatctcgaa tgccccgact acaacatcaa agatgactac ggaggctaat atttcccctg
      901 gttagtacat atacaaaaac cttttaaaat aaaacaaatt tatgatattc tacaggtgtt
      961 aatctatggt tgctgctcat cgatacctaa ggcaacttat catctactta tttgattggt
     1021 tttgataaag gggtcatcaa ctttcaatgg gcatagggga taccatcaga gccggtgatg
     1081 tacaattaat tgatcaaact tttgagtaac tcgcttaaac gaattagggt gaaaatgggt
     1141 tattttcagc taacttttga ttttctaaag ttttatactt cattgtattt atattaatgg
     1201 agtaaagagc tggtggactt tctcttatgt gagtggaaaa ttatttaacc cttcttcatt
     1261 ttaaataaat acctcattaa agggtaaaca tcaatgacgt tattgtcaat tcacaactac
     1321 cttaaattat tagtgtcgtt taacactcta tgagaaacac gtcaaacaac ttacgactta
     1381 catcctattc
//
LOCUS       XR_011757238             918 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840103), transcript variant X5, ncRNA.
ACCESSION   XR_011757238
VERSION     XR_011757238.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..918
                     /gene="LOC139840103"
                     /note="uncharacterized LOC139840103; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840103"
     ncRNA           1..918
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840103"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840103"
ORIGIN      
        1 tttcaggcta ctcacgtcaa atcatcatca ttagtagtgt tgttgctgtc agaaacccag
       61 ttccatttca tcagttgtgg catgttttta agttcatctg aagataaaac agggatattc
      121 gatcaaattg agaagaaaat agaaagagct acaatgttcc ctagaagtca tggagagcca
      181 tcaacgtttt aaggtatgag atcaggcaga ggtacaattc agtataattc acattatgat
      241 gctttcaacc ctaccgtaaa cgattcacaa aagtgtcaac gggaacagaa aatagaacct
      301 ataatatctt cagactggtg ctatgaagga tgtccgacat gcaaaagaac gctaatcgga
      361 aacccaactg atctcgaatg ccccgactac aacatcaaag atgactacgg aggctaatat
      421 ttcccctggt tagtacatat acaaaaacct tttaaaataa aacaaattta tgatattcta
      481 caggtgttaa tctatggttg ctgctcatcg atacctaagg caacttatca tctacttatt
      541 tgattggttt tgataaaggg gtcatcaact ttcaatgggc ataggggata ccatcagagc
      601 cggtgatgta caattaattg atcaaacttt tgagtaactc gcttaaacga attagggtga
      661 aaatgggtta ttttcagcta acttttgatt ttctaaagtt ttatacttca ttgtatttat
      721 attaatggag taaagagctg gtggactttc tcttatgtga gtggaaaatt atttaaccct
      781 tcttcatttt aaataaatac ctcattaaag ggtaaacatc aatgacgtta ttgtcaattc
      841 acaactacct taaattatta gtgtcgttta acactctatg agaaacacgt caaacaactt
      901 acgacttaca tcctattc
//
LOCUS       XM_071830330            1674 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides malate dehydrogenase,
            chloroplastic-like (LOC139840105), mRNA.
ACCESSION   XM_071830330
VERSION     XM_071830330.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1674
                     /gene="LOC139840105"
                     /note="malate dehydrogenase, chloroplastic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 51 Proteins"
                     /db_xref="GeneID:139840105"
     CDS             208..1434
                     /gene="LOC139840105"
                     /codon_start=1
                     /product="malate dehydrogenase, chloroplastic-like"
                     /protein_id="XP_071686431.1"
                     /db_xref="GeneID:139840105"
                     /translation="MAATSASAFSVGSTISHGSKPNPLSQSKACGMNFSSRTTIKSFN
                     GLKANCESVSSFLGKDSSAVLRSAISQKTQNHSRTSTNALQVQASFKVAILGAAGGIG
                     QPLALLVKMSPLVSDLHLYDIANVKGVAADLSHCNTPSRVRDFTGNDELANCLKDVDV
                     VVIPAGVPRKPGMTRDDLFNINAGIVKTLIEAVADNCPDAFIHIISNPVNSTVPIAAE
                     VLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVIGGHAGITILPLLSK
                     TKPSVTFTDQEVDDLTVRIQNGGTEVVEAKAGAGSATLSMAYAAARFLESSLRALDGD
                     SDVYECSFVQSEVTELPFFASRVKLGKQGVEAVISSDLEGLTEFEKKGLEALKVELKG
                     SIEKGVAFAQKQPVTA"
     misc_feature    469..1395
                     /gene="LOC139840105"
                     /note="malate dehydrogenase; Region: PLN00106"
                     /db_xref="CDD:215058"
ORIGIN      
        1 taatagcagc tgagattcgt atggttccac gccagcggta gatttcttcg aggctcagag
       61 gcggagaaac ctaaattaac cccgattaat ctctgataac tcacacaaaa aacacactca
      121 accacttgac ctatttatct aaccgcaatt ttgcacacat ttctctcatc atctaaattc
      181 acagctgctt tcaatacaga gtgtaagatg gcagcaacct cagctagtgc cttttcagtc
      241 ggatcaacaa tatcccatgg ctccaaacct aacccacttt cacaatcgaa ggcatgtggc
      301 atgaatttca gttctcgaac tactataaag agttttaacg gcctcaaggc aaactgtgaa
      361 tcagtctcat cctttttggg caaggatagt tctgcagttt tacgttccgc tattagtcaa
      421 aaaacccaaa accactcgcg aacgtctaca aatgcgcttc aagttcaggc atctttcaaa
      481 gtagccatcc ttggagcagc cggtggtatt ggtcagccac ttgccctttt ggtaaaaatg
      541 tcaccattgg tttctgacct tcacctttac gatatagcaa acgttaaggg agtagcagct
      601 gatctcagcc actgcaacac cccgtctcgg gtccgggatt tcaccggaaa tgatgagtta
      661 gccaactgtt tgaaagacgt agacgttgtt gttattccag ctggcgttcc aaggaaacct
      721 ggtatgaccc gtgacgatct tttcaatatt aacgccggaa tcgttaagac actgattgaa
      781 gctgtggctg ataactgtcc ggatgcgttt attcatatta ttagcaaccc ggttaactca
      841 accgtcccaa ttgctgctga ggtgttgaaa caaaaaggtg tttataaccc gaagaagctt
      901 tttggtgtca ccactcttga tgtggtcaga gcaaacacat ttgttgctca gaagaagaat
      961 ttaaagctga ttgatgttga cgtcccagtt ataggtggtc atgcaggaat tactattcta
     1021 cccttgctgt caaagaccaa accatctgtt acttttaccg atcaagaagt tgatgatcta
     1081 acggtcagga ttcaaaacgg tggaactgaa gtggttgagg ctaaggcggg tgcggggtcc
     1141 gctacactgt cgatggctta tgctgctgca agattcttgg aatcgtctct tcgggcactt
     1201 gatggggata gtgatgtcta cgagtgttcg tttgttcagt cggaagtgac ggagcttccg
     1261 ttttttgcgt cgagggttaa gctcgggaaa cagggggttg aggctgtgat atcttcagat
     1321 cttgaaggtt tgactgagtt tgaaaagaaa ggtttggaag ctttgaaggt ggagttaaag
     1381 ggaagtatcg aaaagggcgt ggcttttgca caaaagcaac cggttactgc ttgaagacga
     1441 tgttagtttt gcgaggaagt tttagagaaa ggtaataata tccggcatgc tcagttttgt
     1501 aaaatttatt ttcaagaact tgtttgtata atttggttga ccgaaaccaa tggtccgcat
     1561 ggatgttttt tgctgatgtt ttgagaaatg taatcgtgta acctgggcta aactcaaact
     1621 taatgcttaa taaagccttc ttgaggtagg ttccagcttt ggtaaaggat gatt
//
LOCUS       XM_071830331            1274 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase,
            chloroplastic-like (LOC139840106), mRNA.
ACCESSION   XM_071830331
VERSION     XM_071830331.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1274
                     /gene="LOC139840106"
                     /note="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840106"
     CDS             33..1124
                     /gene="LOC139840106"
                     /codon_start=1
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase, chloroplastic-like"
                     /protein_id="XP_071686432.1"
                     /db_xref="GeneID:139840106"
                     /translation="MESAFGFRLIPTTTTSFLPSHLPINLRLPSLQRSSFVEQQSNRK
                     NIIRSCYGSEEIGPLDGLQFTPTKIFMEEAIGAEYGEGFETFRPDGPLKVDVDFLNDR
                     LQEGFLKRIRYAMKPDEAYGLIFSWDNVVAGTQALKLSAWKELAREEGKEIPENDNIQ
                     RLLLHGAPDHVLDKVLMWEKEECELERLSSKLSQLYSNNLLKLSEPMEGLKEWLDAVC
                     TARIPCAVVSSLDRRIMVEILENLGLMKYFQAIVTEEDGMDSMAHRLLSAAVKLDRKP
                     SKCVVFEDDPRGITAAHNCTMMVVALIGAHPAYDLVQADLAVGGFNELSVINLRRLFA
                     HTGSTFMELQKQVVEKTPPRRRLTIDTIY"
     misc_feature    396..1004
                     /gene="LOC139840106"
                     /note="Beta-phosphoglucomutase, HAD superfamily
                     [Carbohydrate transport and metabolism]; Region: YcjU;
                     COG0637"
                     /db_xref="CDD:440402"
ORIGIN      
        1 accaaccaac agtaactaac taaatcaaaa ccatggaatc tgcttttggt ttccggttga
       61 ttccaactac tactacttca tttcttccgt cccacctgcc aattaacctc agattaccga
      121 gcttacaacg ttcgagcttc gttgagcaac aaagtaatag gaaaaacata attagaagtt
      181 gttatgggtc tgaagaaatt gggccccttg atggcttaca gtttacaccc accaagattt
      241 ttatggaaga ggcaattgga gctgaatatg gagaaggttt tgagacattt agaccagatg
      301 gaccattgaa agttgatgtt gattttttga atgatagatt acaagagggt tttctaaaaa
      361 gaattcgata tgctatgaag cctgatgaag cttatggact tattttttca tgggataatg
      421 tggtggcggg tactcaagct ttgaagttga gtgcttggaa agaacttgca cgtgaggaag
      481 gaaaagaaat tcccgaaaac gacaatattc aaaggctttt gcttcatggt gctccggatc
      541 atgttttaga taaggtgtta atgtgggaga aggaagaatg tgaattggaa agattaagtt
      601 caaagctttc acagttgtat agcaacaatc ttctcaagct ttcagaaccc atggaaggtc
      661 tgaaagaatg gttggatgcg gtatgtactg cacgcattcc ttgtgctgtt gtttcgagtc
      721 tcgataggcg aattatggtt gaaatattgg aaaacttagg gcttatgaag tattttcagg
      781 caatagtaac agaggaagat ggcatggatt ccatggctca tagattactt tctgcagcag
      841 ttaagttgga tagaaaacca tcgaaatgtg tggtgtttga agatgatcct cgtggcataa
      901 ctgccgccca caactgcaca atgatggtgg tggcacttat cggtgcacat ccagcgtatg
      961 atctggtgca ggctgatctt gctgtcggtg gatttaatga actatcggtg atcaatcttc
     1021 gaagactttt tgcacacacg ggttcaactt ttatggaact acagaagcaa gttgtagaga
     1081 aaacacctcc aagaaggaga cttacaattg acaccattta ctgattctac taaatttctt
     1141 tctgtaaatt tttgtcaagt ttcaaagttt gaatcttgtt atcaatttct gatgttgata
     1201 acaattatta ttattattat tgtgtatata taaaagaact tgcatacata taattagaaa
     1261 gtagtgcatc tcaa
//
LOCUS       XM_071830332            2817 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840107), mRNA.
ACCESSION   XM_071830332
VERSION     XM_071830332.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2817
                     /gene="LOC139840107"
                     /note="uncharacterized LOC139840107; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139840107"
     CDS             147..2666
                     /gene="LOC139840107"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686433.1"
                     /db_xref="GeneID:139840107"
                     /translation="METQNGSVSHFHEHLACIHELQSCDYLLCCRRQNSGNNRDQQPA
                     ATRRYSFHHNRTTFCLLTLFLLIIFSPFNVVCAGNVVRLEDYSALQAIKKELVDFRGV
                     LKNSWKDKNGVCSGGWVGIKCDDQGQVIAVQLPWKGLGGMMSSHFAKLHSLRRISLHD
                     NLLSGPIPQSLWLLPNLRGVYLFNNRFSGSIPPSIITQSSLQNVDLSNNLLNGTIPHH
                     IAVSNSNSTHIDNKIYRFNLSYNAFSGSISSIYTRLPSLTFLALQHNNLSGSIPDSWP
                     SKGGQLKSLTLDHNFLTGSIPSSLSNMNNLEIINLSHNHIDGMIPNELAVNLSKLQIL
                     DLSNNAINGNFPSFSTNKNLSDLILDNNRFNGPIPDTIGDLSSLTQLSLSHNNLIGEI
                     PKSVANLKNLDSLNVSYNNLSGSVPSSLISKFNSSSFVGNIQLCGYSVSTPCPSSSIS
                     PSPSSSQILHSNNKRENRKLSTKDIILIAAGALLLLLLILCCLLLCCLIRKKATKSKS
                     TKVKTDVSMPVSVPTRDEVVESAETGGKLVHFSGTFVFTADDLLCATAEIMGKSTYGT
                     SYKATLEDGNMVAVKRLREKVTKPQKEFETEVSELGKIRHANILSLRAYYLGPKGEKL
                     LVFDYMPHGSLASFLHARGPENVINWTTRLNIILGITKGLVFLHSQESLVHGNLTSSN
                     VLLDEQKNPAIADVGLSRLMTNAANTNVVATAGTLGYRAPELSKLKNANTKTDVYSLG
                     VIILELLTGKSPSEATDGLDLPQWVASIVKEEWTNEVFDLELMKDPANVGGDELLTTL
                     KLAMHCVDPTPEERPEAVQVLEKLEEMKPEFCESSTAAPEK"
     misc_feature    396..518
                     /gene="LOC139840107"
                     /note="Leucine rich repeat N-terminal domain; Region:
                     LRRNT_2; pfam08263"
                     /db_xref="CDD:462411"
     misc_feature    <528..2615
                     /gene="LOC139840107"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    603..674
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    675..746
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    747..821
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    822..914
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    915..989
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    990..1061
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1062..1136
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1137..1205
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1206..1268
                     /gene="LOC139840107"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1821..2621
                     /gene="LOC139840107"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1821..1835,1845..1847,1881..1883,1887..1889,
                     1974..1976,2025..2036,2046..2048,2052..2054,2175..2177,
                     2181..2183,2187..2192,2196..2198,2229..2231,2238..2240,
                     2289..2300)
                     /gene="LOC139840107"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1821..1835,1845..1847,1881..1883,1887..1889,
                     1974..1976,2025..2036,2046..2048,2175..2177,2181..2183,
                     2187..2192,2196..2198,2229..2231)
                     /gene="LOC139840107"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1833..1835,2046..2048,2052..2054,2175..2177,
                     2181..2183,2187..2189,2238..2240,2289..2300)
                     /gene="LOC139840107"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(2226..2249,2280..2288,2289..2300)
                     /gene="LOC139840107"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 tttcttcttt taataaaccc atctcctcat tcatctgctc ttttgatttt tagtcaagca
       61 actctttttt tcttcaatca aattaaaatt aagatttgtg ctatttgtta tttaaaattt
      121 acattttaac tggtgatttt atcttcatgg aaactcaaaa tggctctgtg agtcattttc
      181 acgaacacct ggcgtgcata catgagctgc aatcttgtga ttatttatta tgctgcagga
      241 ggcaaaattc aggaaacaat agagatcaac aaccagcagc aacaagacga tattcgtttc
      301 atcacaatcg aacaacattc tgtttgctta ctctttttct tttgataatt ttttcacctt
      361 ttaatgtagt ttgtgcaggt aatgttgtga ggcttgaaga ttattcagct ctgcaagcca
      421 tcaaaaaaga gcttgttgat ttcagaggag ttttgaagaa cagctggaag gacaaaaatg
      481 gagtttgttc aggtggatgg gttggaatca agtgtgatga tcaaggtcaa gttattgctg
      541 tacagcttcc atggaaggga ttaggtggca tgatgtcatc acattttgca aagcttcatt
      601 cccttagaag aatcagcctt catgataacc tcttatctgg tccgattcct caatctctat
      661 ggctattacc taatctaaga ggtgtttatc tctttaacaa tcggttttcg ggttcaatcc
      721 caccatcaat tattacacaa tcttctctac aaaatgttga tttaagcaat aatctgctta
      781 atggtaccat ccctcaccac attgctgttt ccaattccaa ttcaactcat attgataaca
      841 agatttatcg gtttaatctt agttacaacg ccttttctgg ttcaatttca tcgatttata
      901 cccgtttacc ttcacttacc tttctagctc tacaacacaa taatctctct ggttcaattc
      961 cagattcttg gccctcaaaa ggtggtcaac tcaaatcttt gactcttgat cataattttc
     1021 ttactggttc aattccatct tctttgagta acatgaataa tcttgaaatc attaatctaa
     1081 gccataatca cattgacggc atgataccga atgaactcgc tgttaatctt tccaagcttc
     1141 aaatcttgga tttgtcaaac aatgccatca atggaaattt tccttctttt tctactaata
     1201 aaaatctttc agatcttata ttggataata accgatttaa cggcccgatt cctgatacta
     1261 ttggggatct ttcttctctc actcaactca gtttatccca caataatctc attggtgaaa
     1321 tccccaaatc tgtagctaat ttaaaaaatc ttgattcatt aaatgtttcc tataataatc
     1381 tttcgggtag tgtcccatct tcactaatta gcaagtttaa ttcatcttct tttgtgggta
     1441 atattcagtt atgtggatac agtgtttcaa caccatgtcc atcttcgtct atttcaccat
     1501 ctccatcatc ttcacaaatt cttcattcaa acaataaacg cgaaaatcga aaacttagta
     1561 caaaagatat tatccttata gcagctggag cccttctgct acttctgctt attttatgtt
     1621 gtttactcct ctgctgttta atccgaaaga aagcaaccaa gtccaagtca acgaaggtca
     1681 aaaccgacgt ttcaatgcct gtatcagtac caacacgaga cgaagttgtt gaatcggcag
     1741 aaactggggg taaattggtc catttttcgg gtactttcgt cttcactgct gatgatttgt
     1801 tatgtgcaac tgctgaaata atgggaaaga gtacttatgg aacatcatac aaggccacat
     1861 tagaagatgg taacatggtt gctgttaaaa gacttagaga aaaggtcact aaacctcaaa
     1921 aagaattcga aacagaagtt tctgaattag gaaagattcg gcacgcaaat atcttgtcgc
     1981 ttcgagccta ttatttgggt cctaaaggcg aaaagcttct tgtatttgat tacatgcctc
     2041 atggtagcct tgcatctttc ctccatgctc gcgggcccga aaatgtgata aactggacga
     2101 cgagattgaa tataatactg ggtataacga aaggtctggt ttttcttcac agccaagaga
     2161 gtttagtcca tgggaacctg acttcaagca acgttttact cgatgagcag aagaatccag
     2221 caatagcgga cgtgggtcta tcgaggctca tgacaaatgc agccaacacc aatgtggttg
     2281 caaccgctgg aacccttggt taccgagcac cagagctatc aaagctgaaa aatgctaata
     2341 caaaaactga tgtgtacagt cttggtgtga ttattttgga gctcttgact gggaaatcgc
     2401 ctagtgaggc aacggacggt ctagatttgc cgcagtgggt ggcgtcgatt gtgaaggaag
     2461 agtggacaaa cgaagttttc gatttggaat taatgaagga tccggcgaat gttggtggtg
     2521 atgagctttt aactactttg aagttggcta tgcattgtgt tgatccgaca ccggaagaaa
     2581 ggccagaagc tgtgcaagtt cttgaaaagc ttgaggagat gaagccagag ttttgtgaga
     2641 gttctactgc agcacctgaa aagtgaataa aagagaacta tatatgctca aaaggcaaca
     2701 ttcttttgta agaaatatag atatatatgt atatgattga tgattgattg attacataaa
     2761 ctaagtgtgt atatatgtgt gtttacagtt tacagattga ttggaatttt attaatt
//
LOCUS       XM_071830334             768 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides PRA1 family protein B4-like
            (LOC139840108), mRNA.
ACCESSION   XM_071830334
VERSION     XM_071830334.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..768
                     /gene="LOC139840108"
                     /note="PRA1 family protein B4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 35
                     Proteins"
                     /db_xref="GeneID:139840108"
     CDS             127..768
                     /gene="LOC139840108"
                     /codon_start=1
                     /product="PRA1 family protein B4-like"
                     /protein_id="XP_071686435.1"
                     /db_xref="GeneID:139840108"
                     /translation="MSSSQPAILPISNQQVDVPATTPAFRAFINNITENVRSGLSSRR
                     PWSELVDRSAFSKPDSITDAAGRIRKNYSYFRVNYITVVAAVLGFSLLTNPFSLITLV
                     GLLAAWLFLYLFRPSDPPLVILGRTFSERETLGLLIVSSIVVIFLTSVGSVLISALLL
                     GTALVSAHGAFRTPEDLFLDEQEPGASTGFLSFLSGAASNAAASAAPAVAARV"
     misc_feature    238..666
                     /gene="LOC139840108"
                     /note="PRA1 family protein; Region: PRA1; pfam03208"
                     /db_xref="CDD:460846"
ORIGIN      
        1 gcgtaacttc gtaacttcct acaatccctc tttcaagatt actttaaatc ctccttcgtt
       61 tgcaagctaa actccaaatt aaaatcaaga tccactcaaa ctcaaaatca aaatcgaatc
      121 ggaaaaatga gttcatcaca acctgcaatc cttccgatct caaatcaaca agtcgacgtt
      181 ccagcaacaa cccctgcgtt tcgtgccttc atcaacaaca taaccgaaaa cgtcagatct
      241 ggactctcta gtcgccgtcc atggtccgaa ctcgtcgatc gttctgcctt ctccaagccg
      301 gactccataa ccgatgcagc cggccggatc cggaaaaatt actcctactt ccgagtcaac
      361 tacatcaccg tcgtggccgc cgttctcggt ttctcacttt tgacgaatcc gttctctctg
      421 ataacgctcg tcggactctt agcggcgtgg ttgttcctgt acctgttccg tccttcagat
      481 ccgccgttgg tgatattagg ccgtactttt tcagaacgtg aaaccctagg tctgttgatt
      541 gtatcgagca ttgttgtgat atttctaaca agtgttggat ctgtgttgat atctgcgttg
      601 cttcttggaa cggctcttgt atccgcacat ggtgctttta ggactccaga agatctgttc
      661 cttgatgaac aagagccagg tgcttcaact ggtttccttt cgttccttag tggtgccgcc
      721 tcaaatgcag ctgcttctgc tgcaccagct gttgcagctc gcgtctaa
//
LOCUS       XM_071830335             992 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycine-rich RNA-binding
            protein RZ1A-like (LOC139840109), mRNA.
ACCESSION   XM_071830335
VERSION     XM_071830335.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..992
                     /gene="LOC139840109"
                     /note="glycine-rich RNA-binding protein RZ1A-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840109"
     CDS             101..721
                     /gene="LOC139840109"
                     /codon_start=1
                     /product="glycine-rich RNA-binding protein RZ1A-like"
                     /protein_id="XP_071686436.1"
                     /db_xref="GeneID:139840109"
                     /translation="MIEQDEYRCFVGNLSWSTSDRDLKDAFKKFDHLLDAKVVMDRFS
                     GRSRGFGFVTFDDEKSMEDAIEKMNGIDLDGRNISVDKAQANQGSSRDRDGGGDRYRG
                     RDRGRDRDYGGGGGRGSGGGGGGDCYKCGKPGHFARECTSGDDSRGGGSRYGGRDDRY
                     GGGSRHGPDRSGDRSSGRNRDSGSRGGSGSDRYNRDRDRSGPYERY"
     misc_feature    122..349
                     /gene="LOC139840109"
                     /note="RNA recognition motif 2 (RRM2) found in Nicotiana
                     sylvestris chloroplastic 33 kDa ribonucleoprotein (NsCP33)
                     and similar proteins; Region: RRM2_NsCP33_like; cd21608"
                     /db_xref="CDD:410187"
     misc_feature    479..526
                     /gene="LOC139840109"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
     polyA_site      992
                     /gene="LOC139840109"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccttaaatca aaattagggt tagggtttgg gtgaaacgaa ctacaacact ctttctcgct
       61 tcagtacaca caatagtgtg tgtgaaaaaa gcttttgaaa atgattgaac aggacgagta
      121 tcgttgtttt gttggcaatc tttcatggtc aacatctgac agagatctga aagatgcttt
      181 taagaagttt gaccatcttc tagatgcaaa ggttgttatg gacagatttt ctggacgatc
      241 acgtgggttc ggattcgtta cttttgatga cgaaaaatct atggaagatg caattgaaaa
      301 aatgaacgga atagatttag acggacgtaa tatctcagta gataaagctc aagcaaatca
      361 aggttctagc agagaccgtg atggtggtgg ggacagatac aggggtaggg accgaggtag
      421 agaccgtgat tatggtggcg gcggtgggcg gggatcaggc ggtggtggcg gtggtgactg
      481 ctataaatgt gggaaacctg gtcattttgc tagagaatgt acatctggag atgattcaag
      541 aggaggtggt agcaggtatg gtggtagaga tgatagatat ggtggcggca gccgccatgg
      601 tcctgaccgg agtggtgacc ggtcaagtgg gcggaacagg gattctggca gccgtggagg
      661 atcgggaagc gatagatata accgtgatcg tgatcgttcg ggtccctatg aacgttattg
      721 atagagacgt atttcagcca tgaaaggagg tgggacctag tggcatgaag attgtaaaac
      781 aatctccagg gttttcataa ttacgtcagc ctgttttcag ttgagataaa aactgggatg
      841 tgctttgtta tcttgttttc aagttctagt atccatttct gtttcttttc atatgtaacg
      901 gataaattct tcaagtgtcg aacggattgg tgttggtatt ttgaagttgt aactgcctct
      961 tgtttgagtg tgattttttc ttattactct ga
//
LOCUS       XM_071830336            1756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/LRR-repeat protein
            At5g63520 (LOC139840110), mRNA.
ACCESSION   XM_071830336
VERSION     XM_071830336.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1756
                     /gene="LOC139840110"
                     /note="F-box/LRR-repeat protein At5g63520; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840110"
     CDS             34..1614
                     /gene="LOC139840110"
                     /codon_start=1
                     /product="F-box/LRR-repeat protein At5g63520"
                     /protein_id="XP_071686437.1"
                     /db_xref="GeneID:139840110"
                     /translation="MSSPLPPRPYPPGIMISTIDLIGEDLLHNIFTRLPAISFASAAC
                     VNRTWNLVCDRVLCRPKLSSATSINSSLQVAVEDVVNKVLSEPIRPHFVIASVGPSFD
                     LRQAHQLITAKLGSKVPVITNAPSGIIGRDASTNEFKEIQWEVTLEDDPGVSVALSES
                     ANRSIMLTVGFLPGIRVEAIPLLQPTEESQVFMIDKFVTDIREFSTSISGYKSPAAII
                     MFGDFEVGMKSVMEKLDYAMSPDTVIVGDSGCHILHNNAKSRCTTSSEEYASLAVALV
                     FAVDRNKPAVAGETHFHAILSNGLSPIGPKYKAASVREKNNDSVTWLTARREGSRENI
                     DGETVLNQVYDDLGERIQYPTFYIGVTKRRKCSVGLDKVKWMTSLSFHEVIGDNEEYL
                     FVGDVGIKTGDNFRFYHSDSSTALSSVSNVSDQLRSFKQASTSAGDKREVFGGLIFTC
                     CGRGESFFGQPNVDSSPFLENFPGATLAGQFCGGEIARGDLTPYVRESGEQKSVRCCL
                     HVYSAVYLVMSHAPSKAI"
     misc_feature    91..>180
                     /gene="LOC139840110"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(97..102,106..114,121..126,133..135,166..174,
                     178..180)
                     /gene="LOC139840110"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438922"
     misc_feature    order(97..99,109..111,118..123,130..135,145..147,151..156,
                     166..174,178..180)
                     /gene="LOC139840110"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438922"
     misc_feature    223..1494
                     /gene="LOC139840110"
                     /note="Small ligand-binding sensory domain FIST [Signal
                     transduction mechanisms]; Region: FIST; COG4398"
                     /db_xref="CDD:443524"
     polyA_site      1756
                     /gene="LOC139840110"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gactatagcg gcaagtgtag gaacaccaca gcaatgtcat caccattgcc gccgaggcca
       61 tatccgccgg gcatcatgat atcaacaatc gatctcatcg gcgaagacct tcttcacaac
      121 atattcacca gacttccggc catctcattt gcttccgccg cttgcgttaa ccgtacatgg
      181 aatctcgttt gtgatcgcgt cctttgccgc cctaaacttt catcagcaac ttccatcaat
      241 tcttcgttac aggttgctgt tgaggacgtg gtgaataaag tcttatctga accgattcgt
      301 cctcattttg ttattgcctc cgttggtcca tcgttcgatt tgcgtcaagc tcatcaacta
      361 attactgcaa aactaggctc caaagttcca gtcattacta atgctccatc tggaattatt
      421 ggaagggatg cgtccaccaa tgaatttaaa gagattcaat gggaagttac cttggaggat
      481 gatcctggtg tttctgtagc tttatccgag agtgcaaata gatcaataat gttaactgtt
      541 gggtttcttc caggaataag agttgaagca atcccacttt tacagccaac cgaggaatct
      601 caagttttca tgattgacaa atttgtgacg gacattaggg agttctctac ttctatttca
      661 ggatataaat cccctgctgc cataataatg tttggtgatt ttgaagtagg aatgaaatct
      721 gttatggaaa agctcgatta tgccatgtct ccggatactg ttattgttgg cgatagtggc
      781 tgccatattt tacataacaa tgctaagtct aggtgcacaa catcctcgga agaatacgct
      841 tctttggctg ttgcgttggt atttgcagtt gaccgaaaca aacctgctgt tgctggtgaa
      901 actcattttc acgctatatt atcaaatggg ttgtcaccaa ttggcccaaa atacaaggcg
      961 gcttctgtca gagagaaaaa taatgattct gtgacttggc tcactgcaag aagagaaggg
     1021 tcacgagaga atattgatgg tgaaactgta ttgaatcaag tttatgacga tctaggtgag
     1081 cgcattcagt accctacttt ttacattggg gtgacaaaga gaagaaaatg ctcagttggt
     1141 ctggacaaag tgaaatggat gacttcgctg tcattccacg aagttattgg ggataacgag
     1201 gagtatttat ttgttggtga tgttgggatt aaaacaggcg acaactttcg tttttaccat
     1261 tcagattcca gcaccgctct atcttccgtt tccaatgtct ctgaccaatt aagatcattc
     1321 aaacaagcaa gtacttctgc tggtgataag cgggaggttt ttggcggcct tatcttcact
     1381 tgttgtggcc gtggtgagtc attttttggc caaccaaatg ttgacagctc accatttctg
     1441 gaaaactttc ctggtgcaac tcttgctgga cagttttgtg gtggagaaat agcacgtggt
     1501 gacctaactc cgtatgttag agaatctgga gaacaaaagt cggtacgttg ttgcctgcat
     1561 gtttatagtg ctgtctattt ggtaatgtca catgctccat ctaaagcgat ctaaggtgct
     1621 ttatgtacat ataactagac aatggtattt ttttagtaac cagagtttat gtttgtggat
     1681 ttgtaatgcg gagtagtgat caggattgtg tattcttcta gtgtttttat tgtaatttga
     1741 tactgattgt tgggtg
//
LOCUS       XM_071830337            1466 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cold-responsive protein
            kinase 1 (LOC139840111), transcript variant X1, mRNA.
ACCESSION   XM_071830337
VERSION     XM_071830337.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1466
                     /gene="LOC139840111"
                     /note="cold-responsive protein kinase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139840111"
     CDS             236..1384
                     /gene="LOC139840111"
                     /codon_start=1
                     /product="cold-responsive protein kinase 1 isoform X1"
                     /protein_id="XP_071686438.1"
                     /db_xref="GeneID:139840111"
                     /translation="MGMGCCYGAFDSCKPTTTNLPSDAIATNNVKQFSYNSLRSATRN
                     FHPSNRIGGGGFGVVYKGVLRDETHVAIKRLSAESKQGTVEFLTEINMISRIKHPNLV
                     QLIGCCVEDGNRILIYEFLQNNSLATALLGSRGKHVDLNWATRASICKGTASGLAFLH
                     EEAEPHIVHRDIKASNVLLDGDFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEY
                     ALLGQLTKKVDVYSFGVLMLEIISGRSSSHAAFGEDLFGLVEWAWKLKDEERLLEIVD
                     SDLTDCPDDEVTRFITIALFCTQALSNQRPTMKQVVEMLTKKVNLNVKLLTEPGIYKP
                     HSRSSRSNSDKSEETTRSRGLNAKNPFVTSSSQQVSSNSYSITQMFPR"
     misc_feature    386..1186
                     /gene="LOC139840111"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(386..400,410..412,446..448,452..454,539..541,
                     587..598,608..610,614..616,746..748,752..754,758..763,
                     767..769,800..802,809..811,860..871)
                     /gene="LOC139840111"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(386..400,410..412,446..448,452..454,539..541,
                     587..598,608..610,746..748,752..754,758..763,767..769,
                     800..802)
                     /gene="LOC139840111"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(398..400,608..610,614..616,746..748,752..754,
                     758..760,809..811,860..871)
                     /gene="LOC139840111"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(797..820,848..871)
                     /gene="LOC139840111"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 aaatctaata ctccacttga tatttaaata tttttctaat aatttttgtc tccttgattt
       61 aactattcat attcatatca tacatataca tttaatgttt ctatctatgc tcttcttcca
      121 acttgagtag cctcttcagt gatatgttga tatgatgctg caaactaaag atttgggaca
      181 aaaaatgaga tgtgtgtgat ttaagtcaag ttattcatca taggaagcag aaaaaatggg
      241 tatgggttgt tgttatggtg cttttgattc atgtaaacca acaactacaa atcttccttc
      301 agatgctatt gctacaaaca acgttaaaca attctcgtac aattctttaa gatcggctac
      361 aaggaacttt catccctcaa ataggatcgg cggaggtggt tttggagttg tttataaagg
      421 tgttctgaga gatgagactc atgttgcgat taagcgtctt tcggctgaat ccaaacaagg
      481 gacggttgaa tttttgacag agataaatat gatatccagg attaaacatc ccaacctggt
      541 ccaactcatt ggttgttgcg ttgaagatgg taaccgaatt ttgatatatg agttccttca
      601 aaacaatagc cttgctactg ctttacttgg ttcgagaggt aaacacgtag acttaaattg
      661 ggctacccga gctagtatat gcaaaggaac agcgtcgggt ctagcatttc ttcatgagga
      721 agctgaaccc catattgtcc atcgagatat aaaagcaagt aatgtacttc ttgatggaga
      781 ctttaatccc aaaataggag attttggact tgcaaaatta tttcctgata atgtcactca
      841 tgttagtact cgagtagcag gaacagtggg atacttggct cctgagtatg cattgttagg
      901 acaacttaca aagaaagtag acgtgtatag ttttggggta cttatgctcg aaattataag
      961 tggtagaagt agcagtcatg cggctttcgg ggaggatctc tttggtttgg ttgaatgggc
     1021 atggaagctc aaagatgaag aaagactcct agaaatcgtt gactcggacc taacagattg
     1081 cccggatgac gaggttacac gcttcattac aattgcattg ttttgtacac aagcactttc
     1141 aaatcaaaga ccaacaatga agcaagtggt ggagatgctc acaaaaaaag ttaacctaaa
     1201 tgtaaagttg ttaacagagc ctggaatata caagccacat tcgcgctcaa gtcgttccaa
     1261 tagtgacaag tcagaagaaa caacgagatc ccgaggatta aatgccaaaa atccttttgt
     1321 aactagctcc tcacaacaag taagcagtaa ttcttacagt ataacacaaa tgtttcctag
     1381 atgacccaac agtaattctt gctttgctta ctccagtatc ttggaagaca ttaattgatt
     1441 ggtgtatata tatatatata tatata
//
LOCUS       XM_071830338            1353 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cold-responsive protein
            kinase 1 (LOC139840111), transcript variant X2, mRNA.
ACCESSION   XM_071830338
VERSION     XM_071830338.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1353
                     /gene="LOC139840111"
                     /note="cold-responsive protein kinase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840111"
     CDS             255..1271
                     /gene="LOC139840111"
                     /codon_start=1
                     /product="cold-responsive protein kinase 1 isoform X2"
                     /protein_id="XP_071686439.1"
                     /db_xref="GeneID:139840111"
                     /translation="MVLLIHVNQQLQIFLQMGVLRDETHVAIKRLSAESKQGTVEFLT
                     EINMISRIKHPNLVQLIGCCVEDGNRILIYEFLQNNSLATALLGSRGKHVDLNWATRA
                     SICKGTASGLAFLHEEAEPHIVHRDIKASNVLLDGDFNPKIGDFGLAKLFPDNVTHVS
                     TRVAGTVGYLAPEYALLGQLTKKVDVYSFGVLMLEIISGRSSSHAAFGEDLFGLVEWA
                     WKLKDEERLLEIVDSDLTDCPDDEVTRFITIALFCTQALSNQRPTMKQVVEMLTKKVN
                     LNVKLLTEPGIYKPHSRSSRSNSDKSEETTRSRGLNAKNPFVTSSSQQVSSNSYSITQ
                     MFPR"
     misc_feature    306..1073
                     /gene="LOC139840111"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(495..497,501..503,633..635,639..641,645..647,
                     696..698,747..758)
                     /gene="LOC139840111"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(684..707,735..758)
                     /gene="LOC139840111"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 aaatctaata ctccacttga tatttaaata tttttctaat aatttttgtc tccttgattt
       61 aactattcat attcatatca tacatataca tttaatgttt ctatctatgc tcttcttcca
      121 acttgagtag cctcttcagt gatatgttga tatgatgctg caaactaaag atttgggaca
      181 aaaaatgaga tgtgtgtgat ttaagtcaag ttattcatca taggaagcag aaaaaatggg
      241 tatgggttgt tgttatggtg cttttgattc atgtaaacca acaactacaa atcttccttc
      301 agatgggtgt tctgagagat gagactcatg ttgcgattaa gcgtctttcg gctgaatcca
      361 aacaagggac ggttgaattt ttgacagaga taaatatgat atccaggatt aaacatccca
      421 acctggtcca actcattggt tgttgcgttg aagatggtaa ccgaattttg atatatgagt
      481 tccttcaaaa caatagcctt gctactgctt tacttggttc gagaggtaaa cacgtagact
      541 taaattgggc tacccgagct agtatatgca aaggaacagc gtcgggtcta gcatttcttc
      601 atgaggaagc tgaaccccat attgtccatc gagatataaa agcaagtaat gtacttcttg
      661 atggagactt taatcccaaa ataggagatt ttggacttgc aaaattattt cctgataatg
      721 tcactcatgt tagtactcga gtagcaggaa cagtgggata cttggctcct gagtatgcat
      781 tgttaggaca acttacaaag aaagtagacg tgtatagttt tggggtactt atgctcgaaa
      841 ttataagtgg tagaagtagc agtcatgcgg ctttcgggga ggatctcttt ggtttggttg
      901 aatgggcatg gaagctcaaa gatgaagaaa gactcctaga aatcgttgac tcggacctaa
      961 cagattgccc ggatgacgag gttacacgct tcattacaat tgcattgttt tgtacacaag
     1021 cactttcaaa tcaaagacca acaatgaagc aagtggtgga gatgctcaca aaaaaagtta
     1081 acctaaatgt aaagttgtta acagagcctg gaatatacaa gccacattcg cgctcaagtc
     1141 gttccaatag tgacaagtca gaagaaacaa cgagatcccg aggattaaat gccaaaaatc
     1201 cttttgtaac tagctcctca caacaagtaa gcagtaattc ttacagtata acacaaatgt
     1261 ttcctagatg acccaacagt aattcttgct ttgcttactc cagtatcttg gaagacatta
     1321 attgattggt gtatatatat atatatatat ata
//
LOCUS       XM_071830339            1004 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            DIVARICATA-like (LOC139840112), mRNA.
ACCESSION   XM_071830339
VERSION     XM_071830339.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1004
                     /gene="LOC139840112"
                     /note="transcription factor DIVARICATA-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 43 Proteins"
                     /db_xref="GeneID:139840112"
     CDS             45..899
                     /gene="LOC139840112"
                     /codon_start=1
                     /product="transcription factor DIVARICATA-like"
                     /protein_id="XP_071686440.1"
                     /db_xref="GeneID:139840112"
                     /translation="MGSTMFFEGTKETKWTPEENKRFEDALALFDKDTPDRWHNVAQM
                     IPGKSVSDVMNQYRKLEQDINEIEAEVLVVQPGYNRNGNVDDHVTLEWVVNNHPQFLY
                     SPGGNGVNRSCASNKLPNHEKKKGIPWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTR
                     TPTQVASHAQKYFIRQLSGGKDKRRSSIHDITTVHLNDTAKNTHLSNNNTCPKLGECA
                     PTMATQPPKQAHQHHHMEKPLYQWSLADQQVEFNVPNSSLMMAPLNGTSSYGPQYGHL
                     GTVFQGNC"
     misc_feature    84..224
                     /gene="LOC139840112"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cd00167"
                     /db_xref="CDD:238096"
     misc_feature    order(87..89,186..191,195..200,204..212,216..224)
                     /gene="LOC139840112"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     misc_feature    414..572
                     /gene="LOC139840112"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cl21498"
                     /db_xref="CDD:473887"
     misc_feature    order(429..431,522..527,531..536,540..548,552..560)
                     /gene="LOC139840112"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
ORIGIN      
        1 tcaaatcttt ttttctctcc tcaatattaa catcataata ttttatgggt tcaacgatgt
       61 ttttcgaggg aaccaaagag acgaaatgga ccccggaaga aaacaaacgg tttgaagacg
      121 cactcgcatt attcgataaa gatacgcctg atcggtggca caacgtggct caaatgattc
      181 cggggaaaag tgtgagtgat gtgatgaatc agtatcgaaa attggaacaa gatataaatg
      241 agatagaagc agaggtatta gttgtacaac ctggttataa cagaaatggt aatgttgatg
      301 atcacgtgac attggaatgg gtggtcaata atcacccaca atttctatac agccctggag
      361 gaaatggagt aaacagatca tgtgcatcaa ataagcttcc taatcatgaa aagaaaaaag
      421 gaattccatg gacagaagaa gagcacagac aatttctttt ggggctgaag aagtatggta
      481 aaggcgactg gagaaatatt tctcggaatt ttgtaacaac caggacacca acacaggtcg
      541 ccagtcacgc acaaaaatac ttcattcgtc agctttcggg cggaaaggat aaaagaagat
      601 caagcattca tgatatcacc acagtccacc ttaatgacac tgccaaaaac acacatttat
      661 caaataataa tacttgtccg aaactaggtg aatgtgcccc caccatggcc acacaaccgc
      721 caaaacaagc gcaccaacac caccacatgg aaaaaccact ctaccaatgg agcctagctg
      781 atcagcaggt tgagtttaac gtaccaaata gcagtctgat gatggcacca cttaatggga
      841 cctcgtccta tggacctcag tatggacatt tgggtacagt ttttcaaggg aattgttagg
      901 ggtctgcagt ttttttaaat ttagtctttg tatctcgtgt tgtaggagta taatttatgg
      961 aatatttggc taagtagcta ggagttgtat tgaagtttgt agca
//
LOCUS       XM_071830340            1484 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840113), mRNA.
ACCESSION   XM_071830340
VERSION     XM_071830340.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1484
                     /gene="LOC139840113"
                     /note="uncharacterized LOC139840113; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840113"
     CDS             104..1312
                     /gene="LOC139840113"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686441.1"
                     /db_xref="GeneID:139840113"
                     /translation="MGKKLDALLGRKFKASKLKTTINLAISRLAILKNQRHARFTIAR
                     SDLIQLLRLNYHEQALIRVDQVIKDQNMLDVYGMIHDYCLLFKQRINLLEQSNDCPEE
                     LKEAASSMLYAAPRCGEFPELQEIRGLLTTRFGKEFANNAIELRSNCIVSQKMIQKLS
                     SKQSSLECRMMMLTGIAKENGIVLQLEKFSPEIIIKEKLIIEKKPNAEIMVLTDKVEK
                     DLSFTESVKKYRDVADAAHDAFESAAYAAAAARAAVELSRSESFASDGLDSPNYRAQK
                     VLNFDSVKLNLRMSDLNQMGCEKRTPSSRYDFDSVGEDENSRYNVKVNEFYDEYSDDY
                     SDDDDDRNLQETEMVFDESDYKFEDEETVLPSRNAYFSSYKQFPFKHQANPMAGFGHQ
                     NQGVTTRFRS"
     misc_feature    158..652
                     /gene="LOC139840113"
                     /note="Regulator of Vps4 activity in the MVB pathway;
                     Region: Ist1; pfam03398"
                     /db_xref="CDD:460910"
     polyA_site      1484
                     /gene="LOC139840113"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgttccaact taagcacttg tttctttact cgaacaactt tgttcataat atttgatatt
       61 aatattcatc taaaatatat caattgaata agggaagaaa ggtatgggca aaaagcttga
      121 tgctctcctt ggccgaaaat tcaaggcctc gaagcttaaa acgaccataa acctcgccat
      181 ttcccgccta gccatcctca agaaccaacg tcatgctcgg ttcactatag cccgctcgga
      241 tctcattcaa ctcctccgtc ttaactacca cgaacaagct ctcattcggg ttgaccaagt
      301 gatcaaggac caaaacatgc tagatgtgta tggtatgatt catgactatt gccttctttt
      361 caaacaaagg atcaacctcc tagaacaatc aaatgattgt cccgaagaac taaaagaggc
      421 agcatcgagt atgttatatg cggctccaag atgtggggag tttccagaac tacaagagat
      481 tcgtggactt ttaacaactc gtttcggaaa ggaatttgcc aataatgcta ttgaattacg
      541 aagcaactgc atagttagtc aaaagatgat acaaaaactg tcatcaaaac aatcaagttt
      601 ggagtgcaga atgatgatgc ttactggtat tgccaaggag aatggtattg ttctgcaact
      661 ggagaaattt tcaccggaaa tcatcataaa ggagaaattg attatcgaaa agaaaccaaa
      721 cgcagagata atggttttga cagacaaagt tgaaaaagac ttgagtttta ccgagtcagt
      781 gaaaaagtat agagatgtag cagatgccgc acatgatgct tttgaatcag cggcatatgc
      841 agccgctgcc gccagagctg cggtggagct ctcccggtca gaatcatttg cttctgatgg
      901 tctagatagt cccaattatc gagcccaaaa ggtgcttaat ttcgattcag tgaagttgaa
      961 ccttcgaatg agtgatttaa atcaaatggg atgtgagaaa agaaccccaa gttcaagata
     1021 tgattttgat tctgtaggtg aagatgaaaa ttcaagatac aatgtaaaag tgaatgaatt
     1081 ttatgatgaa tattcagatg attactcaga tgatgatgat gatagaaatt tgcaagagac
     1141 ggagatggtt tttgatgaaa gtgactacaa atttgaagat gaagaaacag ttttaccatc
     1201 taggaatgca tacttctcat cttataagca gtttccattc aagcatcaag ctaacccgat
     1261 ggcagggttt ggtcatcaaa accagggtgt aacaactaga tttagaagtt aaagaccaaa
     1321 catatgggcg ataacgagtg tgcaaatgta tcatatcttt tgtagccttg taggtgttgt
     1381 atgttccttt cgtatttggt ttagacaacc tattttgatc ttttctatgg agtgtacgaa
     1441 ataattgatt acctctgggt ataaattata gatacttttc agta
//
LOCUS       XM_071830341            1790 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            acetyltransferase At3g50280 (LOC139840114), mRNA.
ACCESSION   XM_071830341
VERSION     XM_071830341.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1790
                     /gene="LOC139840114"
                     /note="uncharacterized acetyltransferase At3g50280;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 25 Proteins"
                     /db_xref="GeneID:139840114"
     CDS             50..1453
                     /gene="LOC139840114"
                     /codon_start=1
                     /product="uncharacterized acetyltransferase At3g50280"
                     /protein_id="XP_071686442.1"
                     /db_xref="GeneID:139840114"
                     /translation="MPSSSSSTTNSVNIISKCTVYPHTNSTTKSLQLSVSDLPMLSCQ
                     YIQKGVLLSQPPSNTNIISLLKLSLSKTLSHFPPLAGRLSTDSSGHVHIICNDSGVEF
                     LHATATHLHTHQILHLNTDVHPCFKTFFAFDKTLSYAGHHQPIAAVQVTELADGLFIG
                     CTVNHAVVDGTSFWNFFNTFAEITKGCQKVTNLPNFSRENVFISPVVLPLPTNGPSAT
                     FSGDEPLRERIIHFSRDAILKLKFRANNPLRKPQNSDLNDTEIYGKVCNDVNGKVNGV
                     TFKPKSEISSFQSLCAHLWRAVTRARKFNDTKTTTFRMAVNCRHRLDQKVDPLYFGNL
                     IQSIPTVASVGELLSHDLSWAANELHQNVVAHDNVMVRQGVKEWENNPKLFPLGNFDG
                     AMITMGSSPRFPMYNNDFGWGRPMVVRSGKANKFDGKISAFPGREGDGSIDLEVVLAP
                     ETMSCVECDDEFMQYVS"
     misc_feature    83..1438
                     /gene="LOC139840114"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 cacttccaac acttacacat ttgcttacca ccattaatcc attatcatca tgccttcatc
       61 atcatcttca acaactaatt ctgttaacat aatttcaaaa tgcactgtct acccacatac
      121 aaactcaaca acaaaatcct tgcagctctc tgtttctgat ctcccaatgc tttcatgtca
      181 atacatacaa aaaggtgtat tactttctca accaccatca aataccaata tcatttccct
      241 cttaaaactc tctctctcta aaaccctctc tcacttccca cctctcgccg gccgtctctc
      301 caccgactct tcaggtcatg ttcacatcat ctgcaacgat tccggcgtcg aattccttca
      361 cgccaccgct acccacctcc acacccacca aatcttacac ctaaacaccg acgtccaccc
      421 atgttttaaa accttttttg cttttgataa aactttgagt tacgccggcc accaccaacc
      481 aatcgccgcc gtgcaagtga cggagcttgc cgatggactt tttattgggt gtacggttaa
      541 tcatgctgtc gtagacggga cttctttttg gaactttttt aatacttttg ctgagatcac
      601 aaaagggtgt cagaaagtaa caaacttgcc gaattttagc cgggaaaatg tttttatttc
      661 tccggttgtt ttgcctcttc cgactaatgg cccatcggcg acgttttcag gtgatgagcc
      721 gttgagagaa aggataattc attttagtag agacgcaatt ttgaagttaa aattcagagc
      781 taataatcct ttaaggaaac cacaaaattc ggatctgaat gatacagaga tttacggaaa
      841 agtgtgcaac gacgttaacg gaaaagttaa cggggtgacg tttaaaccga aaagtgaaat
      901 ttcgtcattt cagtctttat gtgctcattt atggcgtgcg gttacacgcg cgcgtaaatt
      961 taacgatact aaaacgacga catttcgaat ggcggtgaat tgtaggcata gattggacca
     1021 aaaagtggac ccactttatt tcgggaactt gatccaaagc atcccaaccg ttgcttcagt
     1081 tggggagttg ttgtcacatg atttgtcatg ggcagccaat gagcttcatc aaaacgtggt
     1141 ggcacatgat aatgttatgg tgcgccaggg tgtaaaggag tgggaaaata atcctaagtt
     1201 gtttcctttg ggtaattttg atggtgctat gattacaatg ggaagttctc ctaggtttcc
     1261 aatgtataat aacgatttcg ggtggggtcg cccgatggtt gttcgtagtg gtaaagcgaa
     1321 taagtttgat ggaaagattt cagcttttcc tggacgtgaa ggcgatggta gtattgatct
     1381 cgaggtcgtt ttagctcccg aaaccatgtc atgtgttgaa tgtgacgatg aatttatgca
     1441 atatgtatct taaatgaatg ttggtcgaat tctagtaaat tcatttcgca ggttttttga
     1501 acggcagcac acacattcat tatcatggat acatacaatt gtttcatctc acaacctaaa
     1561 ccctcaatca catgattaag aagacacgtc catacaacta gaccaatgag tctttggtga
     1621 aatcatttcg ttgtatctat tcatatatac atatgtatat atatctagca aagacattgt
     1681 actaatgttt tgaaataaca acaattacaa tataattgag gaattgaaaa ttgtgttaat
     1741 ggtggttggg gtttgaatat ctttatcgag tctttgaagt cttatattaa
//
LOCUS       XM_071830342            2062 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides O-fucosyltransferase 29-like
            (LOC139840116), mRNA.
ACCESSION   XM_071830342
VERSION     XM_071830342.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2062
                     /gene="LOC139840116"
                     /note="O-fucosyltransferase 29-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139840116"
     CDS             51..1805
                     /gene="LOC139840116"
                     /codon_start=1
                     /product="O-fucosyltransferase 29-like"
                     /protein_id="XP_071686443.1"
                     /db_xref="GeneID:139840116"
                     /translation="MGVAKSWRYTGKVLVLAKHHNCNCKQHRLKVSEHHHCLLWSPSD
                     TAVVGGGGQRRRISWTVVCGLMLFGLGLISFFTGHLASSDLQWYSHKIVVKRKEKVER
                     NSAVPVDLWKSKFPNFYYGCSERSPYYAPPANPTLSNGYLLIAASGGLNQQRTGITDA
                     VVVARILNATLVIPELDHHSYWKDESDFANIFDVNWFISYLAKDVPIVKKVPEKFMRS
                     LEKIPYTMRVPRKSEPQFYLDEVLPILMKRRVLQLTKFDYRLANDLDEELQRLRCRVN
                     YHALRFTKPIQNLGQKIVIEMRKMATRFIAVHLRFEPDMLAFSGCYYGGGDKERNELG
                     EIRKRWATLPETSPDGERKRGKCPLTPHEVGLMLRALGFQNNTYLYVASGEIYGGEET
                     LKPLMELFPNFYTKEMLASKELEPFLPYSSQLAAIDYIVCDESDVFVTNNNGNMAKIL
                     AGRRRYMGHKRTIRPNARKLNALFLKRERVPWKTFAKKVKAAQQGFLGEPDEMKNGRG
                     EFHEYPSTCICKKPFKFSNYNETQTLAKSYFEPEAESGYGRNEEDQGVHNVHYIESAG
                     MIGYHRSLPSSSSSSSSS"
     misc_feature    471..1436
                     /gene="LOC139840116"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; Region: O-FucT_plant; cd11299"
                     /db_xref="CDD:211385"
     misc_feature    order(495..506,972..974,978..980,1194..1202,1323..1325,
                     1380..1388)
                     /gene="LOC139840116"
                     /note="GDP-Fucose binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:211385"
ORIGIN      
        1 aaaagattat atttttgtta ttatatttag ttttgatttt attttactaa atgggggtag
       61 caaaatcttg gagatatact ggtaaagttt tggtgttggc aaaacatcat aattgtaatt
      121 gtaaacaaca tagattgaag gtgtcagagc accatcattg tttattatgg tcaccgtcgg
      181 atacagcggt ggtgggcggt ggaggtcagc ggcggcggat ctcatggacg gtggtttgtg
      241 ggttaatgtt gtttggtttg ggtctgatat cattttttac tggccatctt gcttcttctg
      301 atcttcagtg gtattcacat aaaattgttg ttaaacggaa ggaaaaagtg gagcgtaata
      361 gtgctgtacc agttgactta tggaagtcaa agttcccgaa tttctactac ggatgcagcg
      421 aaagaagccc ttattacgca cctcctgcaa acccgacgct ttcaaatggg tatctgctaa
      481 tcgctgctag tggtggtctg aaccaacaac gaacagggat tacggatgct gtagtcgttg
      541 cacggatttt aaacgctact ttagtcatcc ccgagttgga ccatcactca tattggaagg
      601 acgagagcga ctttgcaaac atatttgatg tcaattggtt catatcttat ctcgctaaag
      661 atgtgcctat tgtcaagaaa gtccctgaga agttcatgag atcacttgaa aaaataccgt
      721 atactatgcg ggtcccgagg aaatcggaac ctcaatttta tctcgatgaa gtactgccta
      781 tactcatgaa gagacgtgtt cttcagctaa ctaaatttga ttataggctt gctaatgatc
      841 ttgatgaaga gctacaacgg ttgcgatgtc gagtgaatta tcatgctttg cggtttacaa
      901 aaccaataca aaatcttggt cagaaaatcg ttattgaaat gaggaagatg gctactcgct
      961 tcattgcagt tcacttgagg tttgaacccg atatgcttgc gttttcgggt tgttactatg
     1021 gtggcggtga taaagaaaga aacgaacttg gtgaaatcag gaaacgatgg gctacattac
     1081 ccgaaacgag ccctgatgga gagcggaaac gagggaaatg tcctttaaca cctcatgaag
     1141 taggtctaat gcttcgggcc cttgggtttc aaaataacac gtatctttat gttgcgtcgg
     1201 gtgaaatata cggtggggaa gaaacattga agcctcttat ggaacttttt ccgaatttct
     1261 atacgaagga gatgcttgct agcaaagagc ttgaaccatt tcttccatat tcttctcagc
     1321 ttgcggccat tgactacatt gtttgcgatg aaagtgacgt ttttgtgact aacaacaatg
     1381 ggaacatggc gaaaattctt gcaggccgaa ggaggtacat ggggcataaa agaacgattc
     1441 gcccaaacgc cagaaagctt aatgctttgt ttcttaaacg cgaaagagta ccatggaaaa
     1501 catttgctaa aaaggtgaaa gcggcccaac aaggattctt gggtgaacca gatgagatga
     1561 aaaacgggcg tggtgaattc catgagtatc cttctacttg tatttgcaag aaacctttta
     1621 agttttccaa ctacaacgaa acccaaacac tcgcaaaatc atactttgag cccgaagcag
     1681 aatccggata cgggcgcaat gaagaagatc aaggcgtgca taatgtgcat tatatagaaa
     1741 gtgctggtat gattggctat catagatcat taccatcatc atcatcatca tcatcatcat
     1801 catagaagcg ttggatggtg ttgacttttt gactgactaa tggcaagaaa aaacttaatt
     1861 ctagacttct aggtttgctt attttttttt cttttttttc tttttttgag ctaagttggc
     1921 tcagagttgc atttatactt ttctgagtgt tattaggcat taaagattga tgtcctaaga
     1981 gtgacatttg ggtgggtatt cagtgaattc tttgtacagg aaggtgttga cgtcctgatg
     2041 gggattcaat tgtgaagtgg gg
//
LOCUS       XM_071830343            1411 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable sugar
            phosphate/phosphate translocator At5g05820 (LOC139840117), mRNA.
ACCESSION   XM_071830343
VERSION     XM_071830343.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1411
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1411
                     /gene="LOC139840117"
                     /note="probable sugar phosphate/phosphate translocator
                     At5g05820; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 44 Proteins"
                     /db_xref="GeneID:139840117"
     CDS             296..1216
                     /gene="LOC139840117"
                     /codon_start=1
                     /product="probable sugar phosphate/phosphate translocator
                     At5g05820"
                     /protein_id="XP_071686444.1"
                     /db_xref="GeneID:139840117"
                     /translation="MKGVTQWYTVGLVLSWYTSNIGVLILNKYLLSNYGFKYPIFLTM
                     CHMTACSLLSYIAIVWFKTVPLQSVRSRVQFFKISALSLVFCASVVSGNVSLRYLPVS
                     FTQAVGATTPFFTAVFAYLMTRKREAWLTYFTLVPVVTGVIIASGGEPSFHIFGFIMC
                     LGATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPVAVVILLPATLLMEDNVVGITI
                     ALARKDVSIVWYLLFNSALAYLVNLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIF
                     KNPVSVMGMLGYVLTVFGVILYSEAKKRTK"
     misc_feature    329..1192
                     /gene="LOC139840117"
                     /note="Triose-phosphate Transporter family; Region: TPT;
                     cl26744"
                     /db_xref="CDD:474852"
ORIGIN      
        1 aatacagctg tagaatggaa ttggaagaga aggtattatt ttcatctcgt ttcattctct
       61 ctgcaactgc aattgcaatt gctgctccaa atactcatcg tttcttatcg tcgccacgtc
      121 accctcgctc aatctgaaac acatattgac tttcaattca atcaatcaat caatcaattc
      181 aatttattaa taatattaat atcaaacttt cagatccact catctaccaa ttccttccgt
      241 actcagatct caatcaattc cccaaatccc atgtaaaccc taaaatcaac tttcaatgaa
      301 aggagtcacc cagtggtaca cagtcggtct ggtgttatca tggtacacat caaacattgg
      361 agtactcata ctcaacaaat acttgttatc caattacgga ttcaagtacc cgattttttt
      421 aaccatgtgc catatgactg cttgttcttt actcagttac attgctattg tttggtttaa
      481 aactgttcct ttacaatctg ttaggtctag ggttcagttt ttcaagatct ctgctcttag
      541 tttagttttt tgtgcttctg ttgttagtgg taatgtttct ttgaggtatt tgcctgtttc
      601 ttttactcaa gcagttggtg caacgacgcc gtttttcact gcggtgtttg cgtatttgat
      661 gactcgaaaa agggaagctt ggttgactta tttcactctt gttcctgttg ttactggtgt
      721 tatcattgct agtgggggtg aaccaagttt ccatatattt ggttttatta tgtgtcttgg
      781 tgctacagct gcaagagcgt taaagtcggt gcttcaaggg attttgctat cttcagaagg
      841 agaaaagctg aattcgatga atcttttgct gtacatggca cccgtagctg ttgtgatatt
      901 gcttcctgca acgttattaa tggaagataa tgtggttggg ataacgatag ctcttgccag
      961 aaaagatgtc agcattgttt ggtatttgct gttcaattct gctctagcgt atctcgtcaa
     1021 tttgacaaat ttcttggtta ccaagcatac aagtgcttta actctccagg ttcttggaaa
     1081 tgcaaaagga gcagttgctg ttgtgatctc aatattgatt ttcaagaatc cggtgtcggt
     1141 aatggggatg ctaggttacg tgcttacggt gtttggtgtg attttgtata gtgaagccaa
     1201 gaagaggacc aaataatcct actcctttat tcacttaaac cttttgtatt tttttttttt
     1261 ttcccctcta tcaaccatgg ttcatatata tatataatat tcttgtccga ttttcgattg
     1321 atgaacagtt acctccattt gttgtatacc ttttcattat tatgaacttt acagttatgc
     1381 tgttgtatac ataaacatta taattatatt g
//
LOCUS       XM_071830344            2371 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides scarecrow-like protein 9
            (LOC139840118), mRNA.
ACCESSION   XM_071830344
VERSION     XM_071830344.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2371
                     /gene="LOC139840118"
                     /note="scarecrow-like protein 9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139840118"
     CDS             90..2183
                     /gene="LOC139840118"
                     /codon_start=1
                     /product="scarecrow-like protein 9"
                     /protein_id="XP_071686445.1"
                     /db_xref="GeneID:139840118"
                     /translation="MDRKIVRFGNSANGNGVPFGNQSITVLPDDKIPNNNPRFDNNYS
                     IYNPVNQFRGIQFDSVSITQSPSPVDSASVQDDVLHEDCDLSDAILGFISQVLMEEDI
                     EDKNCMFYESLDLKAAEKSFYDVIGKKYPPSPSPSSSPSYDERLFSVDQFLNSPNDSC
                     SFSDHSNNNSYVNGNGDLNASYTSLSSFSSGDNVIDGSEISDENQMMMNFKKGVEEAN
                     KFLPVELGADSRVRKSRYMDEDADEDEERSIKQAAIFEDSTLRTNEIDLILLCSMGQG
                     DAALRLMRTTLKAETSKDKLKDKEPKGSIKGKGKGRGRKPKNKKEVIDLRTLLVTCAQ
                     AVVADDRRNASELLKQIRRHASPFGDGSQRLAHCFANGLEARLAGTGSQIHRGLVCKK
                     TSAVDYIKAYHLYIASSPFRKISNFASNRTIMDMAENATRIHIIDFGIFYGFQWPTFL
                     QRISQRRGGPPQLRLTGIEFPQPGFRPAERIEETGARLKEYAKQFNVPFEYQAIAKGW
                     ENVNAEDLKIDKDEFLVVNCMYRSKNLLDETVGVDSARNMVLDFIKKINPNVFIHGIL
                     NGSYNAPFFLTRFKEALFHFSALFDMLEANVPRESSERMLLEGELFGREALNVIACEG
                     WERIERPETYKQWHVRNLRAGFVSIPFARGIIKLAEEKVGLYHKDFMIDVENNWLVQG
                     WKGRIIYAISCWKAA"
     misc_feature    1062..2174
                     /gene="LOC139840118"
                     /note="GRAS domain family; Region: GRAS; pfam03514"
                     /db_xref="CDD:397536"
ORIGIN      
        1 atcactaact atctagggtt tcaaaatcat cttttaaact atttatccag atttcaaatt
       61 gagcatcatt tttgatccat ataatctaaa tggatcgaaa aattgttaga ttcggtaact
      121 ctgcaaacgg aaatggagtt ccattcggta atcaaagtat tactgtatta ccagatgata
      181 aaatcccaaa taataaccct agatttgata ataattattc aatttacaat ccggtgaatc
      241 aatttagagg tatacagttt gattctgtat ctattactca atctccatcg ccagttgata
      301 gtgcaagcgt gcaagatgat gtactgcatg aagattgtga tctatcagat gcaatattag
      361 ggtttattag tcaggtgctt atggaagaag atatagaaga taaaaattgt atgttttatg
      421 agtcgttaga tcttaaagct gctgaaaaat cattttatga cgtcatcgga aaaaaatatc
      481 ctccgtcacc atcaccgtca tcttcaccgt cttatgatga aaggttgttt tctgttgatc
      541 agtttttaaa tagccccaat gatagctgtt cattttcaga tcatagtaat aataatagtt
      601 atgttaatgg taatggtgat ttaaatgcat catatacgtc attaagttcg tttagtagtg
      661 gagataatgt aattgatgga tctgagatta gtgatgagaa tcaaatgatg atgaacttta
      721 agaaaggcgt tgaagaagct aataagtttc ttcctgttga attgggagcg gattcgaggg
      781 tgagaaagag tcggtatatg gatgaagatg cagatgaaga tgaagagagg agtattaagc
      841 aggcggcgat atttgaagat tctactttga ggacaaatga gattgatctg attcttttgt
      901 gtagtatggg acaaggtgat gcagctttac gattgatgcg cacaacttta aaggccgaaa
      961 cgagtaaaga taagcttaag gataaggaac cgaaaggctc gataaaagga aaagggaaag
     1021 gtcgtggtag gaagccgaaa aacaaaaaag aagtgatcga tttgagaacg cttttggtca
     1081 cttgtgcgca ggctgttgtt gctgatgaca gacgtaatgc aagtgaactt ttgaaacaga
     1141 ttaggcgaca cgcttcacct tttggtgatg ggagtcaaag gttagctcat tgtttcgcta
     1201 atggtttaga ggctcgctta gctggcactg gtagtcagat tcatcgagga ttagtttgca
     1261 agaaaacgtc agccgttgat tacattaaag cgtatcatct atatattgct tcttccccgt
     1321 ttaggaagat ttcgaatttt gcctcgaaca gaacaataat ggatatggca gagaacgcaa
     1381 cacggataca cattattgat tttggtatct tctatggctt tcaatggcct acttttcttc
     1441 aacgaatatc tcaacgaagg ggtgggccac cacaacttcg gttaacggga attgaatttc
     1501 cgcaaccggg gttcaggcca gcagaaagaa ttgaagaaac tggtgctcgg ttaaaggagt
     1561 atgctaagca attcaacgtg ccatttgagt atcaagcgat tgcaaaagga tgggagaatg
     1621 tgaatgctga ggatcttaag attgataaag acgagttttt agtggttaac tgtatgtatc
     1681 gatcgaaaaa cttgcttgat gaaacggttg gggtagatag tgcgagaaac atggttcttg
     1741 attttataaa gaagattaac ccgaacgttt ttatccatgg aattctaaac gggtcttata
     1801 acgccccgtt ttttctgacc cggttcaagg aggctctgtt tcatttctcg gcgttatttg
     1861 atatgcttga agcgaatgta cctcgtgaaa gtagtgaacg aatgttgctt gaaggggaac
     1921 ttttcggacg agaagctttg aatgttatag cgtgtgaggg gtgggagagg atcgaaagac
     1981 ccgagacgta caagcagtgg catgttcgta atttaagagc agggtttgtt tcgattccgt
     2041 ttgctcgagg gattatcaaa ctggctgaag aaaaagtagg gttatatcat aaagatttca
     2101 tgatagatgt agagaataat tggcttgtac agggatggaa aggacgaata atttacgcca
     2161 tttcttgctg gaaagctgca tgaatttatt cgccaagtcc attttcgatc gataatttta
     2221 actagcagcc gatttacaca attactcgta acttgatctg actcgcgaca tgttggatat
     2281 agtagtatag cagtgttgaa ttcgaaacag agtgcacttg aatttgtttt ataagttgtg
     2341 aattgtgatg gacctacctt gaataacagt t
//
LOCUS       XM_071830346            2675 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            EMB1444-like (LOC139840119), mRNA.
ACCESSION   XM_071830346
VERSION     XM_071830346.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2675
                     /gene="LOC139840119"
                     /note="transcription factor EMB1444-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840119"
     CDS             565..2460
                     /gene="LOC139840119"
                     /codon_start=1
                     /product="transcription factor EMB1444-like"
                     /protein_id="XP_071686447.1"
                     /db_xref="GeneID:139840119"
                     /translation="MGTTTLRGFLQSLCDSSCWNYAVFWKLQQHNQMVLTWEDGYVGT
                     SKADDSVENLLVEPSFGGIEETSSCNIYNRALGGDAVELAVAFMSTFQYALGDGVIGD
                     VAYTGYCRWLFADLKSLGEFETSVSEHADEWLIQFAAGVKTILLVPVIPHGVLQLGSM
                     ESFPEDVQMANYIKDEFFAHQDFMTYSDAFAMSHQITSQSSLSSMNNLDEFPSFTVNG
                     NTTDVSTTINNDNVNCLNHEALTKSFITPTFDNWYSSHLTAAQMGAIELPEPLHQVTN
                     SISYDVIESEDCTLLNFPKECELHKALGPAFMGNTDDSLKHLSVDESSSSETNAVAKV
                     DLGENNNTNNTQTSSASSLSSSFGQFNALAKQKDVNEKSGVEGDNSFLSNSIASAVFS
                     RVNNHNDSSSPSGISYEGVVDELTIEGEQKSWYDVLHQSKDSKPIAASKRRGKPVAKH
                     KPRPRDRQLIQDRLKDLRELVPDGAKFSIDGLLDRTVKHMQFLESVSDRAIKLRQCVQ
                     TEKVGNSPKNSRITEEKSSQQGASWAFELGSDLKVCPIRVEDLQIPGHMIIEMICDES
                     MRFLEIAEVIHGLNLTISNGLMEERSGNTWARYIVEAPKGFHRLDIFWPLMKLLQQQH
                     SPICSKI"
     misc_feature    580..1095
                     /gene="LOC139840119"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; Region: bHLH-MYC_N; pfam14215"
                     /db_xref="CDD:464106"
     misc_feature    1915..2079
                     /gene="LOC139840119"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     Region: bHLH_SF; cl00081"
                     /db_xref="CDD:469605"
     misc_feature    order(1921..1926,1930..1932,1945..1947,1996..2001)
                     /gene="LOC139840119"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381485"
     misc_feature    order(1939..1944,1951..1956,1960..1965,1975..1977,
                     1999..2004,2011..2016,2023..2025,2029..2034,2041..2046)
                     /gene="LOC139840119"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:381485"
ORIGIN      
        1 tttgtctttt taagaaataa aattcagttg ttaatacagc tgctctttga tgccactttt
       61 gtatctatcc acaacaatta tggaagctac tgaactcgaa cttatttaca ctttctaaat
      121 ctacacttcc tggtttgctt gttcgttttc attcaaaaaa tttgtgctat tttttgagct
      181 atataggact atagtataca gttgatcagt tatacatatt ggtggagctg atttgtagtt
      241 gatggaaggg ctactaagta agatccaaat cgaattgact gcttgcttgt ttcacatagt
      301 atcgtattga aacccaatat tacatagtac ttgtttgtgg tgatctgtgt gttagataag
      361 tgaaaaggtt gtttatcaga tatgcgcagt tccttaatgg tttcatcagg gcctccaata
      421 aagaaacggt ctggtttacg gattaaacaa gcaggacgag gttcatatag ggctagttag
      481 ttgtgttcgt gtacttagat tgttttgatc caaatatata ttttctgtac ttggcgatcg
      541 agtttttagt attgaataat taagatggga actacaacgt taagagggtt cctacagagt
      601 ctttgcgaca gttcttgctg gaattatgct gtgttttgga agcttcaaca acataaccaa
      661 atggttttga cgtgggaaga tggatacgtt ggcacctcga aagctgacga ttctgtcgaa
      721 aacctattgg ttgagcctag cttcggaggc atagaagaaa catcctcatg caatatatat
      781 aacagagcct tgggtggtga tgcggttgaa ttagcagttg cttttatgtc aacctttcag
      841 tatgcgttgg gtgatggggt tattggtgat gtggcatata cggggtattg tcgctggctt
      901 tttgcagatt tgaaatcatt gggggaattt gagacatcag tttctgagca tgcagatgaa
      961 tggttaattc agtttgcagc aggtgtcaag actattttgc tggtgcccgt tattccacac
     1021 ggagttttac agctcggttc aatggaaagc tttcctgagg atgtacagat ggccaactac
     1081 ataaaagatg aattcttcgc ccatcaagat ttcatgactt attccgatgc ttttgcaatg
     1141 agtcaccaaa ttacatctca atcatcatta tcatcgatga ataatttgga cgagttccca
     1201 tcatttacgg tgaatgggaa cacaactgac gtttcaacaa ccattaataa cgataacgtc
     1261 aactgtttaa accatgaagc gttaaccaag agtttcataa cgccgacatt tgataactgg
     1321 tattcatctc atttaacagc agcccagatg ggtgccattg aattacctga accgctacat
     1381 caagtaacta atagtattag ttatgatgtc atagaaagtg aggattgcac attactaaac
     1441 ttccctaaag aatgtgagct gcacaaagct ctcgggcccg ctttcatggg caacacagat
     1501 gattctttaa agcatctatc tgttgatgag tcatcatcta gtgaaaccaa tgcagtagca
     1561 aaagtagatt tgggtgagaa taataacacc aacaataccc aaacgagtag tgcaagctca
     1621 cttagtagtt catttggtca atttaatgct ttggcaaaac aaaaagatgt aaatgaaaaa
     1681 agtggcgttg agggagataa ttcatttctt agtaacagta ttgcatctgc agtttttagc
     1741 agagtgaata atcataacga tagttcttct ccttcgggta tttcgtatga gggtgtagtt
     1801 gatgaattga caatagaagg cgagcaaaaa agttggtacg atgttttgca tcaaagtaag
     1861 gattcgaagc caattgctgc tagcaaaaga aggggcaaac ctgttgctaa acataagcct
     1921 agacctcgag acaggcaatt gatccaagac cggctcaagg acttgcgaga acttgttcca
     1981 gacggtgcaa aatttagcat tgatggtctg ctggatcgga ctgtaaaaca tatgcagttt
     2041 cttgaaagtg tcagtgatcg ggctatcaaa ttgaggcagt gtgtccaaac cgagaaagta
     2101 ggaaatagtc caaagaacag tagaataact gaagagaaaa gtagtcaaca aggcgcaagc
     2161 tgggcatttg aactaggaag cgatttaaaa gtatgtccga tacgcgtcga agatcttcaa
     2221 atccctggcc acatgatcat agagatgata tgtgatgaga gcatgcgatt ccttgagata
     2281 gctgaggtga tacatggcct gaacttgacg atttctaatg gactgatgga ggagcgttcc
     2341 ggaaacacat gggctcgtta cattgtagag gctccaaagg gatttcacag attggatata
     2401 ttttggccgt taatgaagct tctgcagcaa cagcatagtc caatatgtag caaaatctga
     2461 tgctattgca atggtgatgt aaactaaatt tcataagatt gatgttatgc tttttgttaa
     2521 tgataagcag ataaccagga catcaatgtt agtttgtttt gatataatct gtagcatata
     2581 tgaaccgtag ctgcaacata aacttgtaca tggccaagcc ttttgaagtg caactgataa
     2641 ctttagtacc tatttgtgga aattgatgtt tattc
//
LOCUS       XM_071830347            1039 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NADPH-dependent aldo-keto
            reductase, chloroplastic-like (LOC139840120), mRNA.
ACCESSION   XM_071830347
VERSION     XM_071830347.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1039
                     /gene="LOC139840120"
                     /note="NADPH-dependent aldo-keto reductase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 30 Proteins"
                     /db_xref="GeneID:139840120"
     CDS             1..954
                     /gene="LOC139840120"
                     /codon_start=1
                     /product="NADPH-dependent aldo-keto reductase,
                     chloroplastic-like"
                     /protein_id="XP_071686448.1"
                     /db_xref="GeneID:139840120"
                     /translation="MANSDIRFFELSNTTKMPSVGLGTWQSDPGLVGHAVDAAIRMGY
                     RHIDCAQVYGNEKEIGLVLKKLFQDNVVKREDLWITSKLWCNDHDPEDVPVALDRTLN
                     DLQLDYLDLYLMHWPVKMKKGSVGFKPENLVPVDIPSTWKAMEKLYDSGKARAIGVSN
                     FSTKKLRDLLDVARVQPAVNQVECHPSWKQTKLRDFCKAKGVHLSGYSPLGSPGTSFI
                     KSDVLKHPVLASVAEKLGKTPAQVALRWGLQMGHSILPKSTSESRIKENFDVFDWSIP
                     NDLFSKISSEIEQARLLRGTSFVNETHGSYKTLEELWDGEI"
     misc_feature    19..882
                     /gene="LOC139840120"
                     /note="AKR4C family of aldo-keto reductase (AKR); Region:
                     AKR_AKR4C1-15; cd19125"
                     /db_xref="CDD:381351"
     misc_feature    order(67..75,142..144,157..159,244..246,343..348,475..480,
                     541..543,619..639,661..663,667..669,718..720,763..780,
                     787..789,796..801,880..882)
                     /gene="LOC139840120"
                     /note="active site"
                     /db_xref="CDD:381351"
     misc_feature    order(142..144,157..159,244..246,343..345)
                     /gene="LOC139840120"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381351"
ORIGIN      
        1 atggcgaata gcgacattcg attctttgag ctatctaaca ccaccaaaat gccatcggtt
       61 ggtttgggga cgtggcaatc ggatcctggc cttgttggtc atgctgttga tgctgctatt
      121 aggatgggct atcgacatat tgattgtgct caagtttatg gcaatgagaa ggagattggt
      181 ttggtattaa agaagctatt tcaagataat gtggtgaaaa gagaagattt atggattact
      241 tctaagctct ggtgtaatga tcatgaccca gaagatgtac ctgttgcact agacagaaca
      301 ttgaatgatt tgcagcttga ctatcttgat ttgtacctta tgcattggcc tgtgaagatg
      361 aagaagggat ctgttggctt taagcccgag aaccttgttc cagtagatat tcctagtacg
      421 tggaaagcaa tggaaaagct ttacgattcg ggcaaggcac gagccattgg cgttagcaac
      481 ttttcgacta aaaaattgag agatttgttg gatgtcgcac gtgtacaacc tgctgtcaac
      541 caagttgaat gtcatccttc atggaagcag actaaactga gagacttttg caaagcaaaa
      601 ggcgttcatc tttctggata ttcaccactt ggttctcccg gaacatcgtt tatcaaaagt
      661 gatgttctta aacatccggt tctagcttca gtagccgaaa aattgggaaa aacacctgca
      721 caggttgcgc tacgctgggg tctgcaaatg ggtcatagta tacttcctaa gagtacaagt
      781 gaatcccgaa tcaaagaaaa ttttgatgtt tttgactggt caattcctaa tgacttgttt
      841 tctaaaattt cttcagagat tgaacaggct aggttgttga gaggtacatc gtttgtgaat
      901 gagacacatg gttcctacaa gaccctcgag gaactttggg acggtgaaat atgaccgaaa
      961 agtaggcttc gttcatattt tactttgatc tacaatttta aatcttaata ttttctcatg
     1021 taccaaggga tatcttgaa
//
LOCUS       XM_071830348            2540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At1g51745-like (LOC139840121), mRNA.
ACCESSION   XM_071830348
VERSION     XM_071830348.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2540
                     /gene="LOC139840121"
                     /note="uncharacterized protein At1g51745-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139840121"
     CDS             497..2245
                     /gene="LOC139840121"
                     /codon_start=1
                     /product="uncharacterized protein At1g51745-like"
                     /protein_id="XP_071686449.1"
                     /db_xref="GeneID:139840121"
                     /translation="MGSSCEENGKPLDPTVGGLVWVRRRNGAWWPGRILGSDELPESC
                     LLTPRSGTPVKLLGREDASVDWYNFEKSKRIKAFRCGEYDECIEKAKNAASMSYKRTV
                     KYARRDDAILHALEIESSQSSKHCPDTTSPELSRSAASADHDPNDSSNSEQSDEETEN
                     ISDKVSSLEHISISPQEYSTEDDAMEGSKKRMRGLEDIGTAGAVSSFKRRRTQVAHVH
                     DYLKKRNRRRMLSKVLKSSTMITVPVRCEQLMSTNGSFLNNELVTSFSDSNGDITNNA
                     TNGKQKEKEISSIDELIENYDSSGMLFDVPLIGDEKQTAGSSSRLLYPGYAGAVAHAG
                     QSSLVETLSLGPNETNESGSISSGDAVGITNYTSQQIEENGTSRWQHKGKRKSRNKRR
                     ALQKFAYTNALANSSTQVNIEETVDVMAPQRLTPYRQSHFTVNPKYEPSELAYNINEL
                     GSLYDVNVEVKVGHFPQNVPYISLMSKLTGQPITGHSLEVDVMNDSECFSSSPELDSV
                     NGVNGNIHMVPEAFKNSKRNNGASSNKKIRSLSSLTGSNRPSETGMVTKPILACVPLK
                     VVFSRINAALGINSKR"
     misc_feature    545..814
                     /gene="LOC139840121"
                     /note="PWWP domain; Region: PWWP; pfam00855"
                     /db_xref="CDD:459964"
ORIGIN      
        1 ttcttttgtt ttctgcacac actacaaaga agccaaattt caccctaaat caaaacgctt
       61 aaagctaatc gttcaccatt aaaacccagg tttgatttga tgataaaata accctacaag
      121 taaaaaaaaa cttggaaaaa caagaagcca tatttttttt tatgcataaa cccacaaaaa
      181 gaaatcattt ctgctagttt caaacttatc aaatttcgaa acttacaaga taattttttc
      241 aaatttagtt tacaattcta tttcttgatc cgtttatcaa aattactgta taacctaaag
      301 tgggattttt ccctgcatgc aatattacta atattgaatt tgatattttc aattccaatt
      361 ttgttctagg gtttgtgaac aaatccatta ggttatccaa ttaccctatt ttaactcaag
      421 atttatatca ttgtttacat tatctttgta atatttgatg ggtgtttaaa gttagggcat
      481 tttttagggt agggaaatgg gtagttcttg tgaagaaaat ggtaaacctt tagacccaac
      541 agtgggtggg ttggtttggg tccggagaag aaatggggca tggtggccgg gtcggatatt
      601 gggttcggat gagttaccag aaagttgttt gcttacacct agatcgggta ctccggttaa
      661 gctattagga agagaggatg ccagtgtgga ctggtataat tttgagaaat caaaacgcat
      721 aaaggcattt cgatgtggtg aatatgatga atgtattgaa aaagcaaaga acgctgcttc
      781 aatgtcctac aagagaacag tcaaatacgc acgtagagac gatgcaattc ttcacgccct
      841 cgaaattgaa agttcccaat cgtccaaaca ttgtcccgac acaacctcac cggagttatc
      901 acgtagtgct gcttcagcag atcatgaccc aaatgactca tctaacagtg aacaatccga
      961 tgaagaaacc gaaaacatat cagataaagt aagtagctta gaacacatat cgatttcgcc
     1021 tcaggaatat tcaacggaag atgatgcaat ggaaggaagt aagaagcgta tgcgaggact
     1081 cgaagatatc gggactgcag gggcggtttc gtcatttaag aggaggcgga cacaagtggc
     1141 acatgtacat gattacttaa aaaagagaaa ccgacgccga atgttatcga aagttttaaa
     1201 gagtagtacg atgataactg ttcctgttag gtgtgaacaa cttatgagca caaacgggtc
     1261 gtttctgaat aatgaattgg tgacgagttt ttcagacagt aatggtgata tcacaaataa
     1321 tgcaaccaat ggaaaacaga aggagaaaga aatatcgagc attgatgagt taattgagaa
     1381 ttacgattct tccggaatgc tgtttgatgt tccgcttatt ggagacgaga aacagactgc
     1441 aggttcttct tcacggttgt tatacccggg ctatgcaggt gctgtagctc atgctggtca
     1501 aagtagcctc gttgaaactt tatcgttggg acccaatgaa actaacgaat ctggttccat
     1561 cagttccggt gatgctgttg gtataactaa ctatacgagc caacaaattg aagaaaatgg
     1621 tacttcaaga tggcagcata aagggaaaag aaaatcaaga aataaacgca gagctttgca
     1681 gaaatttgca tacacaaacg ctcttgctaa ttcgtcaaca caagtcaata tcgaagaaac
     1741 agttgatgta atggccccac aaagattaac gccttatcgt caatcccatt ttacagttaa
     1801 tcccaaatac gagccatcgg agcttgctta caacataaac gaattgggtt cgctgtatga
     1861 cgtcaacgtg gaggttaaag tgggccattt tccacagaat gttccttaca tatctctcat
     1921 gagtaagtta acgggccaac ccataaccgg gcattcactt gaagtagatg ttatgaacga
     1981 ttctgaatgt tttagtagta gtcccgagtt agattcggtc aatggtgtca acggaaacat
     2041 tcatatggtt ccggaagcct tcaagaattc aaagaggaac aatggggcgt cgtctaacaa
     2101 gaaaattcga agcttatcat cgttaacggg ttccaacaga ccgagtgaaa cagggatggt
     2161 tacaaagcct attttagcat gtgttccact aaaagttgtt ttcagtagga taaatgcagc
     2221 attgggtata aattcaaagc ggtaaatttt tttattactg aagaggggcg caggttgtcg
     2281 ttgatggctg caggtcgttt ttttgttttt tttttctact aaaactaggt agggattttt
     2341 agctttttta gcaagttaat gtttgattaa tacgttttgt tcgtaaactg cccgacgcct
     2401 gttgtacaat aatggagtgg tggtgatggc taggttgttg aatggttagg gttttgtata
     2461 gaaatggtat aaacttggta tgaaatgttg cgtaaaaact agtcgattgt tgtacggaag
     2521 cgtgcagtgc ctattaggag
//
LOCUS       XM_071830349            2787 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone-lysine
            N-methyltransferase, H3 lysine-9 specific SUVH1-like
            (LOC139840122), transcript variant X1, mRNA.
ACCESSION   XM_071830349
VERSION     XM_071830349.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2787
                     /gene="LOC139840122"
                     /note="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139840122"
     CDS             204..2480
                     /gene="LOC139840122"
                     /codon_start=1
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH1-like"
                     /protein_id="XP_071686450.1"
                     /db_xref="GeneID:139840122"
                     /translation="MEHSISSEEVLDKSRVVEVKPLRCLVPIFPSPAASFATPQSLPF
                     AFVSPTGPFPAGASQFFPIFAPNEPPKPVITPEPPIQNQTQSQNQNQSQNQNQSQSQN
                     QNQNQNQSQSQNQNQSQIQNHNQNQNQSLSQNQNQTQSQNHNQNQNHSQETSYAIPSP
                     VPLNSFRTPVSVENNVRRGRPKGSKNRVVEVVTDDGYENGFTVDSTDDGSDVIHHKRK
                     ARKTVKGPQAVAVSNSEVDIDPLVNHLLKTFNLMDIDTHLQADSDHDLVQRVVMVYNL
                     LRRKIMQLDDAKGVIHGISRRADLRSGTILMNKGARANTKRRIGTVPGVNIGDVFFFR
                     MELCLAGLHAPIMAGIDYLSFKVSGDEEPVAVSIVSSGGYEDDGDDADVLIYSGQGGV
                     MRNDKSATDQKLERGNLALEKSLHRGNEVRVVRGIKDGTQITGKIYVYDGLYKLHESW
                     IERATSGCNVFKYKLIRVPGQPEGYMLWKSIQQWRDGVTTRVGVILPDLTSGAENLPI
                     CLVNDVDSEKGPAYFTYTSSLSYAKPYISSNSASCRCSNGCQPAINCPCVEKNGGYLP
                     YSAAGVLLSHNLVIHECGPSCLCPPTCRNRVSQTGLKLRLEVFRTKNKGWGLRSWDPI
                     RAGAFICEYAGEVIENATDSDDDYIFDATRSFEPLEPLPTDEPVKIPFPLIVSAKNKG
                     NVSRFMNHSCSPNVYWQPILRENEKESYLHVGFYAINHIPPLHELTFNYGTPRSEKNG
                     LQKKKCLCGSPKCKGHFY"
     misc_feature    1149..1616
                     /gene="LOC139840122"
                     /note="SET and RING finger associated domain; Region: SRA;
                     smart00466"
                     /db_xref="CDD:197742"
     misc_feature    1767..2399
                     /gene="LOC139840122"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; Region: SET; cl40432"
                     /db_xref="CDD:394802"
     misc_feature    order(2046..2051,2256..2273,2295..2303,2388..2399)
                     /gene="LOC139840122"
                     /note="active site"
                     /db_xref="CDD:380914"
     misc_feature    order(2046..2051,2259..2273,2394..2396)
                     /gene="LOC139840122"
                     /note="SAM binding site [polypeptide binding]; other site"
                     /db_xref="CDD:380914"
ORIGIN      
        1 ttatcattaa ataatttaat tcctgtaaaa tcctcccttt cttccttcct tagacaacgc
       61 cggaaactca ctataaactc gggtggacat tttcaatcca aatttgtggt caattacatt
      121 aattttaatg caatttttgg tgattcaagg tttaattggg agattttagt ttggtggtag
      181 aatttcaagt gtgattgata ttgatggaac acagtatcag ttcagaggag gtacttgata
      241 aatctagggt tgtagaggtt aagccgttac gatgtcttgt accgattttt ccatcgccag
      301 ccgcttcttt tgcaacacct cagtcactac cgtttgcgtt tgtttctcca actggtccct
      361 ttcctgctgg tgcttcacag tttttcccta tttttgctcc taacgagcct cctaagccag
      421 ttattacgcc cgaaccacca atccagaatc aaactcagag tcaaaatcaa aatcagagtc
      481 aaaatcaaaa tcagagtcaa agtcagaatc aaaatcaaaa tcaaaatcag agtcaaagtc
      541 agaatcaaaa tcagagtcaa attcagaatc ataatcagaa tcaaaatcag agtctaagtc
      601 agaatcaaaa tcagactcaa agtcagaatc ataatcagaa tcagaatcac agtcaggaaa
      661 catcttacgc tatcccatcg ccggttcctt tgaattcatt taggacacca gtgtcagttg
      721 aaaacaatgt gcgcagaggg agaccgaaag gctctaagaa tcgtgtagtg gaagtagtaa
      781 cagatgatgg ttatgagaat ggattcaccg tagattctac agatgatggc agtgatgtta
      841 tccatcataa gcgtaaagct cgtaaaaccg ttaagggacc acaagcagta gctgtttcta
      901 attctgaagt tgacattgat ccgttagtta atcatctttt gaaaactttc aatctgatgg
      961 atatcgatac acatcttcaa gctgatagtg atcatgattt ggtccaacgt gtggtcatgg
     1021 tgtataattt acttaggaga aagatcatgc agcttgatga tgcaaaagga gttatacatg
     1081 gtatatctag acgagcagac ttaaggtccg gtacaattct aatgaataaa ggagctcgtg
     1141 ccaatactaa aagacggatt ggtacagtac ctggtgtcaa tattggtgac gttttctttt
     1201 tccgaatgga attgtgcttg gcaggattgc atgctccaat tatggctggg atcgattatc
     1261 tgagctttaa ggttagtggt gatgaggagc ctgttgcggt tagtattgtt tcttctggag
     1321 gatatgaaga tgatggagac gatgcagatg tgctaatcta tagcggtcaa ggtggtgtta
     1381 tgagaaacga taaatcagcg acggatcaaa agcttgaaag gggtaatctt gcgttggaaa
     1441 aaagtttgca tcgtggtaat gaggtaagag tcgttcgtgg tatcaaagat ggaacacaaa
     1501 taactgggaa gatatatgtt tatgatggct tatataaact ccacgagtct tggatcgaaa
     1561 gagcgacgtc tggttgcaat gttttcaagt acaaattgat tagggttccg ggtcaacctg
     1621 aaggatatat gctgtggaag tcaattcagc agtggagaga cggtgttacc acacgggtcg
     1681 gggttatctt gcccgatctc acttctggtg ctgaaaattt accaatttgt cttgtaaatg
     1741 acgtggatag tgaaaagggt cctgcttatt ttacttacac ttcgagttta agttatgcaa
     1801 aaccatatat ttcatctaat tctgcaagct gtagatgctc taatggatgc caacctgcaa
     1861 ttaactgccc ttgtgttgag aaaaacggtg ggtatcttcc atattcggct gctggtgttc
     1921 ttttgagtca taacttagtg attcatgagt gtggtccttc atgtttatgt cctcctactt
     1981 gtagaaaccg agtttcccaa acgggtttaa agcttcgttt agaggtgttc agaacaaaga
     2041 ataagggctg gggacttagg tcatgggacc ccattcgggc tggagctttt atatgtgagt
     2101 atgcaggtga agtgattgaa aatgcaaccg atagtgacga tgattacata tttgatgcta
     2161 cccgatcttt tgaaccattg gagcctttgc ctactgatga gcctgtcaag attccatttc
     2221 cactcattgt cagtgctaaa aataagggaa atgtgagtcg ttttatgaat catagttgtt
     2281 cacctaatgt gtattggcag ccaattttgc gtgaaaatga aaaggagtcg tatcttcatg
     2341 ttggatttta tgctatcaat catattcctc cgttgcatga attaacgttc aattatggta
     2401 ctccacggtc tgagaaaaat ggactgcaga aaaagaagtg cttgtgtgga tcgcctaaat
     2461 gcaaaggtca cttttattag ccatcaacat gaagatagtg aagaccatgc aggtcaaatg
     2521 ttgacttttg taaaaggtta gggctctcct tttgccttta gtatgttatt tagtgtgtgt
     2581 ttctgtgttg ttgtgatttt tatgtgtgct aattgtaggt tttctgaatt taaaacttat
     2641 ggagtaataa ttttgtacta gttattgtta attttcattt tttagatctg aagtcatctt
     2701 ttcatcagta tgtttcagtt taatatttgc actgcattta cttcgagttg atgttatgca
     2761 atagtgcgtc cagagttgtt tttttag
//
LOCUS       XR_011757239            2746 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone-lysine
            N-methyltransferase, H3 lysine-9 specific SUVH1-like
            (LOC139840122), transcript variant X2, misc_RNA.
ACCESSION   XR_011757239
VERSION     XR_011757239.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2746
                     /gene="LOC139840122"
                     /note="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139840122"
     misc_RNA        1..2746
                     /gene="LOC139840122"
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH1-like, transcript variant X2"
                     /db_xref="GeneID:139840122"
ORIGIN      
        1 ttatcattaa ataatttaat tcctgtaaaa tcctcccttt cttccttcct tagacaacgc
       61 cggaaactca ctataaactc gggtggacat tttcaatcca aatttgtggt caattacatt
      121 aattttaatg caatttttgg tgattcaagg tttaattggg agattttagt ttggtggtag
      181 aatttcaagt gtgattgata ttgatggaac acagtatcag ttcagaggag gtacttgata
      241 aatctagggt tgtagaggtt aagccgttac gatgtcttgt accgattttt ccatcgccag
      301 ccgcttcttt tgcaacacct cagtcactac cgtttgcgtt tgtttctcca actggtccct
      361 ttcctgctgg tgcttcacag tttttcccta tttttgctcc taacgagcct cctaagccag
      421 ttattacgcc cgaaccacca atccagaatc aaactcagag tcaaaatcaa aatcagagtc
      481 aaaatcaaaa tcagagtcaa agtcagaatc aaaatcaaaa tcaaaatcag agtcaaagtc
      541 agaatcaaaa tcagagtcaa attcagaatc ataatcagaa tcaaaatcag agtctaagtc
      601 agaatcaaaa tcagactcaa agtcagaatc ataatcagaa tcagaatcac agtcaggaaa
      661 catcttacgc tatcccatcg ccggttcctt tgaattcatt taggacacca gtgtcagttg
      721 aaaacaatgt gcgcagaggg agaccgaaag gctctaagaa tcgtgtagtg gaagtagtaa
      781 cagatgatgg ttatgagaat ggattcaccg tagattctac agatgatggc agtgatgtta
      841 tccatcataa gcgtaaagct cgtaaaaccg ttaagggacc acaagcagta gctgtttcta
      901 attctgaagt tgacattgat ccgttagtta atcatctttt gaaaactttc aatctgatgg
      961 atatcgatac acatcttcaa gctgatagtg atcatgattt ggtccaacgt gtggtcatgg
     1021 tgtataattt acttaggaga aagatcatgc agcttgatga tgcaaaagga gttatacatg
     1081 gtatatctag acgagcagac ttaaggtccg gtacaattct aatgaataaa ggagctcgtg
     1141 ccaatactaa aagacggatt ggtacagtac ctggtgtcaa tattggtgac gttttctttt
     1201 tccgaatgga attgtgcttg gcaggattgc atgctccaat tatggctggg atcgattatc
     1261 tgagctttaa ggttagtggt gatgaggagc ctgttgcggt tagtattgtt tcttctggag
     1321 gatatgaaga tgatggagac gatgcagatg tgctaatcta tagcggtcaa ggtggtgtta
     1381 tgagaaacga taaatcagcg acggatcaaa agcttgaaag gggtaatctt gcgttggaaa
     1441 aaagtttgca tcgtggtaat gaggtaagag tcgttcgtgg tatcaaagat ggaacacaaa
     1501 taactgggaa gatatatgtt tatgatggct tatataaact ccacgagtct tggatcgaaa
     1561 gagcgacgtc tggttgcaat gttttcaagt acaaattgat tagggttccg ggtcaacctg
     1621 aaggatatat gctgtggaag tcaattcagc agtggagaga cggtgttacc acacgggtcg
     1681 gggttatctt gcccgatctc acttctggtg ctgaaaattt accaatttgt cttgtaaatg
     1741 acgtggatag tgaaaagggt cctgcttatt ttacttacac ttcgagttta agttatgcaa
     1801 aaccatatat ttcatctaat tctgcaagct gtagatgctc taatggatgc caacctgcaa
     1861 ttaactgccc ttgtgttgag aaaaacggtg ggtatcttcc atattcggct gctggtgttc
     1921 ttttgagtca taacttagtg attcatgagt gtggtccttc atgtttatgt cctcctactt
     1981 gtagaaaccg agtttcccaa acgggtttaa agcttcgttt agaggtgttc agaacaaaga
     2041 ataagggctg gggacttagg tcatgggacc ccattcgggc tggagctttt atatgtgagt
     2101 atgcaggtga agtgattgaa aatgcaaccg atagtgacga tgattacata tttgatgcta
     2161 cccgatcttt tgaaccattg gagcctttgc ctactgatga gcctgtcaag attccatttc
     2221 cactcattgt cagtgctaaa aataagggaa atgtgagtcg ttttatgaat catagttgtt
     2281 cacctaatgt gtattggcag ccaattttgc gtgaaaatga aaaggagtcg tatcttcatg
     2341 ttggatttta tgctatcaat catattcctc cgttgcatga attaacgttc aattatggta
     2401 ctccacggtc tgagaaaaat ggactgcaga aaaagaagtg cttgtgtgga tcgcctaaat
     2461 gcaaaggtca cttttattag ccatcaacat gaagatagtg aagaccatgc aggtcaaatg
     2521 ttgacttttg taaaaggaaa aatgatgttt ttgtgctgtg aggaatgaga ggtaagaaga
     2581 gaaatggcag agagaaaaat aagggtaact taatataata atgtttggtt ggtttgaacg
     2641 ttagcagttt atatgttact tctacaattt tgtagtatga tgcattattc tttgcgagtt
     2701 gaagatatta tttgatattt gattgattat tgtacttgga aatcta
//
LOCUS       XM_071830350            1074 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mannose-P-dolichol
            utilization defect 1 protein homolog 2-like (LOC139840123), mRNA.
ACCESSION   XM_071830350
VERSION     XM_071830350.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1074
                     /gene="LOC139840123"
                     /note="mannose-P-dolichol utilization defect 1 protein
                     homolog 2-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139840123"
     CDS             94..819
                     /gene="LOC139840123"
                     /codon_start=1
                     /product="mannose-P-dolichol utilization defect 1 protein
                     homolog 2-like"
                     /protein_id="XP_071686451.1"
                     /db_xref="GeneID:139840123"
                     /translation="MVQMEFLGMDFSCVFGSLTNGKFPEKDCLLPLVSKLLGYAIVAA
                     STTVKVPQIMKIIQHKSVRGLSVAAFEMEVIGYTIALAYCLHKGLPFSAYGELAFLLI
                     QAIILVATIYYFSQPVSNATWIRALLYCGIAPTILAGKIDPLLFEALYASQHAIFFFA
                     RVPQIWENFKNKSTGELSFLTSFMNFAGSIVRVFTSLQEKAPTSVVMGSVIGILTNGA
                     ILSQIMIYQKAQDKPTKKGKKAE"
     misc_feature    187..771
                     /gene="LOC139840123"
                     /note="Lysosomal Cystine Transporter; Region: 2A43;
                     TIGR00951"
                     /db_xref="CDD:130026"
ORIGIN      
        1 aaaaacccat ctacatattt tagttcacaa ttttcaccgg aattttgaca attccaccgg
       61 cgatatccca aacaattaaa tctgaccttc aaaatggttc aaatggagtt cttggggatg
      121 gattttagct gtgtttttgg atcgttaaca aacggaaagt tccctgaaaa ggattgttta
      181 cttccgttgg tttctaaact tttaggttac gcaatcgttg ctgcttcaac caccgttaaa
      241 gtacctcaga taatgaaaat cattcaacat aaaagtgtaa gaggtcttag tgttgccgca
      301 tttgaaatgg aagtaattgg ttatacgatt gctttggcat attgtcttca caaaggactt
      361 ccattttcag cttatggaga gttggccttt ctcttgatcc aagctataat tttggtggca
      421 accatctact atttttctca acctgtaagt aatgcgacat ggatccgtgc attgttatat
      481 tgtggcattg ctccaacaat cttagctggg aaaattgatc cccttctctt tgaagctctt
      541 tatgcatccc agcatgcaat ctttttcttt gccagggtcc cacaaatttg ggaaaacttt
      601 aaaaacaaaa gcacggggga gcttagcttc ttgacttcat ttatgaattt tgctggttct
      661 attgtgagag tgtttaccag tcttcaagaa aaagctccaa caagtgttgt gatgggctcg
      721 gttattggca tactgacaaa tggtgcaatc ttgagccaaa tcatgatata ccagaaggca
      781 caagataagc caacaaagaa agggaagaaa gcagagtaaa aaaacatcat gtgggtagtg
      841 accattcaaa gttcttcaaa cagagttctc tctttgtttc catacatgac ttctttgttt
      901 ctagtcattc aaaaattgtt catgtttatt aaattcaaaa tcttgttaga atcttcaaca
      961 tgatagttag tagccaactt gaatagttat taatgttgtt agttcggtgc ataatgtggt
     1021 ggttaatgtc gttaatggtt cgcttatgca agaaatatgt ttattaaaac attt
//
LOCUS       XM_071830351            1737 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fructokinase-like 1,
            chloroplastic (LOC139840124), mRNA.
ACCESSION   XM_071830351
VERSION     XM_071830351.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1737
                     /gene="LOC139840124"
                     /note="fructokinase-like 1, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139840124"
     CDS             81..1472
                     /gene="LOC139840124"
                     /codon_start=1
                     /product="fructokinase-like 1, chloroplastic"
                     /protein_id="XP_071686452.1"
                     /db_xref="GeneID:139840124"
                     /translation="MAILQILPSPPSFHSTKPFRSSPKFHIPKASVNGDHTVSSPPPP
                     KPARRGRKSSTITTKVPPSKPQSNKIETISDEIEDFDDGIDFPYDDPPLICCFGAAQK
                     EFLPTVRISDQQRHPDMYSEWKELQWDPPEFARAPGGPPSNVAIAHVRLGGRAAFIGK
                     VGDDDFGQELVLMMNKENVQTRGVKIDANSKTGCTYMKIKFDSKGKMTAEKVKDSAED
                     SLLSSELNLSVLKEARIFHFNSEVLTSDSMKSALFKAITWSKKFGSLIFFDMNLPLPL
                     WKSRHETRKVIQNAWEQADIIEVSKQELEFLLDEHYHERRRNYEPQYYAESFDETKEK
                     GKDYYHYTREEIAPLWHDKLKFLFVTDGTLRLHYYTPLFDGVVVGTEDVLITPFTCDR
                     TGSGDAVVAGIMRKLTTYPEMFENQDVLDRQLRFAIAAGIISQWTIGAVRGFPTESAT
                     QNLKEQVYVPSMW"
     misc_feature    90..1469
                     /gene="LOC139840124"
                     /note="pfkB-type carbohydrate kinase family protein;
                     Region: PLN02543"
                     /db_xref="CDD:215299"
     polyA_site      1737
                     /gene="LOC139840124"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggaaatcctc ttccaaaacc cataaactca ggtggttaaa ccctaactac catttccaac
       61 accaccacca accaccgtcc atggcgattc ttcaaatcct tccgtcacca ccatcctttc
      121 attccacaaa acccttccgt tcatctccca aattccatat ccctaaagca tctgtcaacg
      181 gcgaccacac cgtctcctct ccaccgccac ccaaacccgc tcgccgtggc cgcaaatcat
      241 ccaccatcac aaccaaagtg ccaccatcaa aacctcaatc aaacaaaatc gaaacaatct
      301 cagacgaaat tgaagatttc gatgatggaa ttgatttccc atacgacgat ccacctctta
      361 tctgctgttt cggagctgca cagaaggaat ttttaccaac agttaggatt tcagatcagc
      421 aaaggcatcc ggacatgtat tcagaatgga aagaattgca gtgggaccca ccggagtttg
      481 ctagggctcc aggtggaccg ccatcgaatg ttgcgatagc tcacgtacgt ctcggtggtc
      541 gggctgcatt tatagggaaa gtaggggatg atgattttgg tcaggagttg gtgttgatga
      601 tgaataagga aaatgtgcaa actagaggtg tgaaaattga tgctaattcg aaaactggtt
      661 gtacttatat gaagattaag ttcgatagta aagggaagat gactgctgaa aaagttaaag
      721 attctgcaga ggattcgttg ttgagttctg aattgaatct ttcggtgctc aaagaggcaa
      781 gaatattcca cttcaattca gaagtcctaa catccgactc aatgaaatcc gccttattta
      841 aagcaatcac ctggtcaaaa aaattcggca gccttatatt cttcgacatg aatcttcctt
      901 taccactgtg gaaatctcgc cacgaaacaa ggaaggtaat ccaaaacgca tgggaacaag
      961 ctgacatcat cgaagtcagc aaacaagaac ttgaatttct gttggacgaa cactaccatg
     1021 aaagaagacg aaactacgaa cctcaatact acgcagaatc tttcgatgaa acgaaagaaa
     1081 aagggaaaga ttattatcac tacacacgtg aagaaatagc cccgttgtgg catgataaat
     1141 taaagtttct atttgtgaca gatggaacac ttcggcttca ttattatact ccgttgtttg
     1201 atggtgttgt ggtggggaca gaggacgtgt tgatcacgcc gtttacttgt gatagaacgg
     1261 gttcaggtga tgcagttgtt gctggtatta tgagaaagtt gactacttat ccggaaatgt
     1321 ttgagaatca agacgttctt gatcggcagc ttcggtttgc gattgctgct gggattatat
     1381 ctcagtggac aatcggggca gttagaggtt ttcctacaga aagtgctact caaaatctga
     1441 aagaacaggt ttatgtacct tcaatgtggt agcatcttaa gccaaagatt ttagtaagag
     1501 ctaccgagtt gaatcgacaa cccagaaaac tcgggtcgat cgcttttgtt ttgatctggt
     1561 tgattcgttt tgggttagtt taggtttgtt gtgcatgaac attgttgtaa tagaacagcc
     1621 attttttcga aattagaaat agagaatgcg gtcacttttt gcttttaaat gtttcattta
     1681 catgtaacaa aaatgtagta atctaatcaa acaaaggtac tatttttatt tgtaaca
//
LOCUS       XM_071830352            1900 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AP3-complex subunit
            beta-A-like (LOC139840126), transcript variant X1, mRNA.
ACCESSION   XM_071830352
VERSION     XM_071830352.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1900
                     /gene="LOC139840126"
                     /note="AP3-complex subunit beta-A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840126"
     CDS             108..410
                     /gene="LOC139840126"
                     /codon_start=1
                     /product="AP3-complex subunit beta-A-like isoform X1"
                     /protein_id="XP_071686453.1"
                     /db_xref="GeneID:139840126"
                     /translation="MAPTGGTKSVGFTSSPSRSLSSQKYVAVLGLAKEIATLEPGKFR
                     KGVIHVLFYHHLFPLKLILWCNGIKHLVKLRLDIGYFIMHLPMDLDVLLCCLFNIL"
     polyA_site      1900
                     /gene="LOC139840126"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caagtattta ctactagtag atttaatgga tctgtaacta atgatccaat atgctgtgaa
       61 taggcaaaaa aaagtgttgc tgcattccaa gacggtgaag accaatcatg gcaccaacag
      121 gtggaaccaa atcagtgggc tttacatctt caccatctag gtctttgtca tctcaaaagt
      181 atgtagcagt tctgggtctt gcgaaagaaa ttgctacgct tgaacctggc aagtttagaa
      241 aaggtgtcat ccatgttctg ttttatcatc atctctttcc tcttaagctc atcttatggt
      301 gcaatggcat aaaacatctg gttaagttgc ggcttgacat aggctacttc ataatgcatc
      361 tcccaatgga tcttgatgtc ttattatgtt gcttattcaa catcttatga agctcatttt
      421 atttctgtag tgttatgatg ctttaatttg cttcccaaaa taattgggga tgaccattat
      481 caaccacaaa actttaatag atttgatcac ataagaacac aaagtaaaaa tatatgaaga
      541 atgtcaccaa tttaatttct gctcaaaagc ctcgcggagt agtgatattc agcgtatcca
      601 tttctgcaac aagagttttg aaattataat gaaataatga tgtttataaa aacacaagaa
      661 catcattatt cttttttgtg ctgcatttag caacagttga tgggttccat aaagaaatag
      721 tatttgctca aaatcacaga aaatgctaac tctggtatat cccacatcgg tgtagaaaag
      781 aaagaaggta atagaagact gcctataaaa accaacgcct gtgataagaa aatttatacc
      841 tttctcggcc ttttggctaa gatcaagtgt agtatctgtt cttatcagtt taatatctga
      901 tatgtgagcc atcggctcac tcgatattaa tcttattttt catggggaaa ggcccattac
      961 ggtagcttgc tatcggggtc tttgcgagtc gccttggtgt tgcactactg ccttggcctg
     1021 gctcacccct ccaaatctaa gtttaaattc ttttctaaaa tttgatctaa gtttaaattc
     1081 ttttctaaaa tttgattttt gtaaaccgtt ggttttgtgc tattgtaaat gctctgaaca
     1141 actgaatgca caatgaagat taagtatccc gcctagggag ttcgcaagaa tgaaactcaa
     1201 aaggaattga tgggggcccg cacaagcggt agagcatgtg gtttaatttg atgcaaagcg
     1261 aagaacctta ccagggcttg acatgccgcg aatcctcttg aaagagaggg gtgccttggg
     1321 aacgcggaca ccggtggtgc atggctgtcg tccgctcgtg ccgtaaggtg ttgggttaag
     1381 tcccgcaacg agcgcaaccc tcgtgtttag ttgccatcat tgagtttgga accctgaaca
     1441 gactgtcggt gataagccgg aggatgacgt caagtcatca tgtttaattt gttatacgga
     1501 gtacataata gtaatttgta ctatttagcc gggcctcctg taactagtta ggtaaaccgt
     1561 ttattataat cgcttcctaa aaggctctat ttggctgtgt aaaccaaagc ttggagaatt
     1621 cttgaatgaa aatgaaagaa aaccagcaga ttcagcagaa tatttgatct tagattgctg
     1681 aatgaatcaa agaaagtttc tcgttcattg atatgaagga atcttggagc tatcaccgtc
     1741 aaactagaag cacattgaga aagggatatg tgatatctgt aactttaaac cggcgagttt
     1801 ggatgttttg gtggctgatc agctcgtgca aagtatggta ggattgtgtt attgtgtgat
     1861 tgatttgttt gattgttaaa gagattactt ttttactgta
//
LOCUS       XM_071830353            1892 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AP3-complex subunit
            beta-A-like (LOC139840126), transcript variant X2, mRNA.
ACCESSION   XM_071830353
VERSION     XM_071830353.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1892
                     /gene="LOC139840126"
                     /note="AP3-complex subunit beta-A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840126"
     CDS             103..402
                     /gene="LOC139840126"
                     /codon_start=1
                     /product="AP3-complex subunit beta-A-like isoform X2"
                     /protein_id="XP_071686454.1"
                     /db_xref="GeneID:139840126"
                     /translation="MAPSGTKSVGFTSSPSRSLSSQKYVAVLGLAKEIATLEPGKFRK
                     GVIHVLFYHHLFPLKLILWCNGIKHLVKLRLDIGYFIMHLPMDLDVLLCCLFNIL"
     polyA_site      1892
                     /gene="LOC139840126"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atttactact agtagattta atggatctgt aactaatgat ccaatatgct gtgaataggc
       61 aaaaaaaagt gttgctgcat tccaagacgg tgaagaccaa tcatggcacc aagtggaacc
      121 aaatcagtgg gctttacatc ttcaccatct aggtctttgt catctcaaaa gtatgtagca
      181 gttctgggtc ttgcgaaaga aattgctacg cttgaacctg gcaagtttag aaaaggtgtc
      241 atccatgttc tgttttatca tcatctcttt cctcttaagc tcatcttatg gtgcaatggc
      301 ataaaacatc tggttaagtt gcggcttgac ataggctact tcataatgca tctcccaatg
      361 gatcttgatg tcttattatg ttgcttattc aacatcttat gaagctcatt ttatttctgt
      421 agtgttatga tgctttaatt tgcttcccaa aataattggg gatgaccatt atcaaccaca
      481 aaactttaat agatttgatc acataagaac acaaagtaaa aatatatgaa gaatgtcacc
      541 aatttaattt ctgctcaaaa gcctcgcgga gtagtgatat tcagcgtatc catttctgca
      601 acaagagttt tgaaattata atgaaataat gatgtttata aaaacacaag aacatcatta
      661 ttcttttttg tgctgcattt agcaacagtt gatgggttcc ataaagaaat agtatttgct
      721 caaaatcaca gaaaatgcta actctggtat atcccacatc ggtgtagaaa agaaagaagg
      781 taatagaaga ctgcctataa aaaccaacgc ctgtgataag aaaatttata cctttctcgg
      841 ccttttggct aagatcaagt gtagtatctg ttcttatcag tttaatatct gatatgtgag
      901 ccatcggctc actcgatatt aatcttattt ttcatgggga aaggcccatt acggtagctt
      961 gctatcgggg tctttgcgag tcgccttggt gttgcactac tgccttggcc tggctcaccc
     1021 ctccaaatct aagtttaaat tcttttctaa aatttgatct aagtttaaat tcttttctaa
     1081 aatttgattt ttgtaaaccg ttggttttgt gctattgtaa atgctctgaa caactgaatg
     1141 cacaatgaag attaagtatc ccgcctaggg agttcgcaag aatgaaactc aaaaggaatt
     1201 gatgggggcc cgcacaagcg gtagagcatg tggtttaatt tgatgcaaag cgaagaacct
     1261 taccagggct tgacatgccg cgaatcctct tgaaagagag gggtgccttg ggaacgcgga
     1321 caccggtggt gcatggctgt cgtccgctcg tgccgtaagg tgttgggtta agtcccgcaa
     1381 cgagcgcaac cctcgtgttt agttgccatc attgagtttg gaaccctgaa cagactgtcg
     1441 gtgataagcc ggaggatgac gtcaagtcat catgtttaat ttgttatacg gagtacataa
     1501 tagtaatttg tactatttag ccgggcctcc tgtaactagt taggtaaacc gtttattata
     1561 atcgcttcct aaaaggctct atttggctgt gtaaaccaaa gcttggagaa ttcttgaatg
     1621 aaaatgaaag aaaaccagca gattcagcag aatatttgat cttagattgc tgaatgaatc
     1681 aaagaaagtt tctcgttcat tgatatgaag gaatcttgga gctatcaccg tcaaactaga
     1741 agcacattga gaaagggata tgtgatatct gtaactttaa accggcgagt ttggatgttt
     1801 tggtggctga tcagctcgtg caaagtatgg taggattgtg ttattgtgtg attgatttgt
     1861 ttgattgtta aagagattac ttttttactg ta
//
LOCUS       XM_071830354            1970 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides L-type lectin-domain
            containing receptor kinase V.9-like (LOC139840127), mRNA.
ACCESSION   XM_071830354
VERSION     XM_071830354.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1970
                     /gene="LOC139840127"
                     /note="L-type lectin-domain containing receptor kinase
                     V.9-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139840127"
     CDS             133..1872
                     /gene="LOC139840127"
                     /codon_start=1
                     /product="L-type lectin-domain containing receptor kinase
                     V.9-like"
                     /protein_id="XP_071686455.1"
                     /db_xref="GeneID:139840127"
                     /translation="MIPKDPKFAFHGMTFAITPSKSVIEASTSQHLGLFNRTNDGNAS
                     NHIVAIELDSFKNIELGDIDSNHIGLDINSIVSVFATTAGYYDQNGVFKNLTLASSQE
                     IRAWVDYDGVTKHLNVTIVPVRMLKPLKPLISLQKDLSPFLLEEMYVGFTSATGVLVQ
                     TFYVVAWSFRINGEAQDIDLSNLPSLPIKKESNKKKKFGLAIGLCLGGLVVMGVSIWA
                     FVLYRRRKRKFSEVLESWEVQYGPHRFTYKDLYTATKGFKESELLGKGGFGQVYKGVL
                     PNIGTQVAVKKIWHESGQGMKEFVAEIATIGRLRHPNLVRLLGYCRRQDELFLVYDYM
                     PNLSLDSLLFDPKSCVILTWKQRVKIILDVAEALAYLHEGWVEVIIHRDIKASNVLLD
                     ADLNAKLGDFGLARFGNNGSEAHTTHLAGTLGYIAPELARKGKATTATDVFAFGAFVL
                     EVVCGRRPVQVLGRNEVTILLELVLDCWFKDELLKMVDPKLGDDYVIEELGLFLKVGL
                     LCSHSSQSVRPSMSQVLKFLKGEEPLPEDFKSVLEIRDDYSGRSGDGLASPYFSQIQY
                     DTAITESLVSSGR"
     misc_feature    <133..651
                     /gene="LOC139840127"
                     /note="legume lectins, lectin-like receptor kinases,
                     arcelin, concanavalinA, and alpha-amylase inhibitor;
                     Region: lectin_legume_LecRK_Arcelin_ConA; cd06899"
                     /db_xref="CDD:173887"
     misc_feature    238..240
                     /gene="LOC139840127"
                     /note="N-linked glycosylation site; other site"
                     /db_xref="CDD:173887"
     misc_feature    order(283..285,289..291,331..333)
                     /gene="LOC139840127"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:173887"
     misc_feature    919..1722
                     /gene="LOC139840127"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(919..933,943..945,982..984,988..990,1075..1077,
                     1123..1134,1144..1146,1150..1152,1279..1281,1285..1287,
                     1291..1296,1300..1302,1333..1335,1342..1344,1393..1404)
                     /gene="LOC139840127"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(919..933,943..945,982..984,988..990,1075..1077,
                     1123..1134,1144..1146,1279..1281,1285..1287,1291..1296,
                     1300..1302,1333..1335)
                     /gene="LOC139840127"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(931..933,1144..1146,1150..1152,1279..1281,
                     1285..1287,1291..1293,1342..1344,1393..1404)
                     /gene="LOC139840127"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1330..1353,1381..1404)
                     /gene="LOC139840127"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     polyA_site      1970
                     /gene="LOC139840127"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggtcgaatca ttagaaccaa cgaattctta gaatccggtg tcggtcacac cttctacgcg
       61 cacccgttcc ggttcaaaaa ctcaactccg gccggcaacg ccttctcatt ttcgacccaa
      121 ttcgtattcg gaatgatacc aaaagatcca aaattcgcgt ttcacggcat gacgtttgcg
      181 attacgccat caaaatcagt aattgaagca tctacttctc aacatctagg gctgtttaat
      241 cgaacaaacg atggaaatgc atcgaaccat atagtcgcga ttgaactcga ttcgtttaag
      301 aatattgagc taggtgatat agatagtaat catatcggtc tggatatcaa tagtatcgta
      361 tcggttttcg caacaacggc aggttattat gatcaaaatg gtgtgtttaa gaatttaact
      421 ttagctagct cacaagagat tagggcatgg gttgattatg atggtgttac aaaacatttg
      481 aatgtaacaa ttgtacctgt acgtatgtta aaacccctaa aacccttgat ttctttacaa
      541 aaggacttat ccccattttt attagaagaa atgtatgtag ggtttacttc tgcaactggt
      601 gttcttgttc aaacgtttta tgttgttgct tggagttttc gaatcaatgg tgaagcccaa
      661 gatattgatt tgtccaatct tccatcttta cctatcaaga aagaatcaaa caaaaagaaa
      721 aaatttggtt tggcaattgg gttgtgttta ggtggactag ttgtaatggg ggtgtcaatt
      781 tgggcattcg ttttgtatcg aagaagaaag cgtaagtttt cggaagtttt agaaagttgg
      841 gaggtacaat atgggccaca taggtttact tataaagatt tgtacacagc aacaaaaggg
      901 tttaaagaga gtgagttgtt agggaaaggc ggttttgggc aggtttataa aggggttttg
      961 cctaatatag gaactcaggt tgcagtgaaa aagatttggc atgaatcggg tcagggaatg
     1021 aaggaatttg tggccgagat tgctacaatt ggacggttaa gacacccgaa tttggttaga
     1081 ctccttgggt attgtagaag acaagatgaa ttgtttcttg tgtatgatta tatgccaaat
     1141 ttgagcttag atagtttgtt gtttgatccg aaatcgtgtg tcattttaac gtggaaacaa
     1201 agggttaaga ttattctaga tgttgcggaa gctttagctt atttacacga gggatgggtc
     1261 gaggtaataa tccataggga tattaaagcg agtaatgtgt tactagacgc agatttaaat
     1321 gccaaattag gcgattttgg gctagcgagg tttgggaaca atgggtcgga agctcatacg
     1381 acccatttgg cgggaacttt gggctacatt gcacccgagt tagctagaaa agggaaagca
     1441 acaaccgcta ccgatgtttt cgcttttgga gcatttgttt tggaggttgt ttgtggtcga
     1501 cggcccgttc aggtgctagg gcggaacgaa gtgacaatat tgttggaatt agtgttggat
     1561 tgctggttta aggatgagtt gttgaaaatg gttgatccaa aacttggaga tgattacgtt
     1621 atcgaggagt tgggtttgtt tttaaaggtc gggttgcttt gttcgcatag ttctcaatca
     1681 gtgaggccaa gtatgtcaca agttttgaag tttcttaaag gggaagagcc attgcccgaa
     1741 gatttcaaaa gtgtgttgga gatacgagac gattactcgg gtcgatctgg tgacgggctg
     1801 gctagtcctt acttctcgca aatacagtat gatacagcga tcaccgaatc gctcgtctcc
     1861 tcgggtcgtt gatactttac ttaaaggtgt ccgtaaatgt taactcgggt cattaaacta
     1921 tgatggtata ctgggagaaa aagaatgtaa ttatttattg atttgtttca
//
LOCUS       XM_071830355            1134 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides actin (LOC139840128), mRNA.
ACCESSION   XM_071830355
VERSION     XM_071830355.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1134
                     /gene="LOC139840128"
                     /note="actin; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 125 Proteins"
                     /db_xref="GeneID:139840128"
     CDS             1..1134
                     /gene="LOC139840128"
                     /codon_start=1
                     /product="actin"
                     /protein_id="XP_071686456.1"
                     /db_xref="GeneID:139840128"
                     /translation="MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG
                     VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEE
                     HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDG
                     VSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKL
                     AYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGI
                     HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAP
                     PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF"
     misc_feature    22..1116
                     /gene="LOC139840128"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; Region: ASKHA_NBD_actin; cd10224"
                     /db_xref="CDD:466823"
ORIGIN      
        1 atggccgacg gagaagatat tcagcctctc gtgtgcgata atggaactgg aatggtcaag
       61 gctggatttg ctggagacga tgccccgaga gcagtttttc ctagcattgt tggacgtcca
      121 cgtcacactg gagtgatggt tggtatggga caaaaggatg catatgttgg tgacgaagct
      181 caatcgaaac gtggtatttt aactttgaaa tacccaatcg aacacggtat tgtgaataac
      241 tgggacgaca tggaaaagat atggcatcac accttctaca atgaacttcg tgtggctcca
      301 gaagagcacc cggttctcct tacagaagca ccgcttaatc caaaagccaa tcgtgaaaaa
      361 atgactcaaa ttatgtttga gacgtttaat tctcctgcta tgtatgttgc tattcaggcc
      421 gtcctctcat tgtatgccag tggtcgtaca actggtattg ttcttgactc tggagatggt
      481 gtgagtcaca cggttccaat ttacgagggg tacgcactcc cacacgccat tctgcgtctc
      541 gaccttgcag gtcgtgacct cacagatgcg ttgatgaaaa ttcttaccga gagaggttac
      601 tctttcacga caaccgctga acgagaaatt gttcgagaca tgaaagaaaa gttggcatac
      661 attgctcttg attttgaaca ggaactagaa acttccaaaa ctagctcttc ggttgaaaaa
      721 agcttcgagt tacctgatgg tcaggtgatc actatcggag ctgagcggtt caggtgtccc
      781 gaagtacttt tccagccgtc gatgatcggg atggaagctg caggaattca cgagacaact
      841 tataactcca tcatgaaatg tgacgtggat attaggaagg atttgtacgg aaacattgtt
      901 cttagtggtg ggaccaccat gtttcctggt attgctgatc gaatgagcaa ggaaattact
      961 gcattagccc cgagcagcat gaagattaag gtcgtagctc cacctgaaag gaagtacagt
     1021 gtgtggatcg gagggtccat tttggcatct ctcagtacct tccagcagat gtggatcgca
     1081 aaggctgaat atgatgaatc tggaccgtcc attgtccaca ggaaatgttt ctaa
//
LOCUS       XM_071830357             987 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides proteasome subunit alpha
            type-3-like (LOC139840129), mRNA.
ACCESSION   XM_071830357
VERSION     XM_071830357.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..987
                     /gene="LOC139840129"
                     /note="proteasome subunit alpha type-3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840129"
     CDS             104..853
                     /gene="LOC139840129"
                     /codon_start=1
                     /product="proteasome subunit alpha type-3-like"
                     /protein_id="XP_071686458.1"
                     /db_xref="GeneID:139840129"
                     /translation="MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKD
                     GIVIGVEKLIASKMMLPGSNRRIHSVHRHSGMGVAGLAADGRQIVARAKSEANNYEST
                     YGEPIPVKELAERVASYVHLCTLYWWLRPFGSGVILGGYDRDGPQLYMVEPSGVSYRY
                     FGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKTFELEMSWVCD
                     ESNRLHQKVPEALLEEAISAAKAALEEMDAD"
     misc_feature    116..751
                     /gene="LOC139840129"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...; Region:
                     proteasome_alpha_type_3; cd03751"
                     /db_xref="CDD:239720"
     misc_feature    order(131..142,146..151,155..160,170..172,179..181,
                     188..193,200..202,224..226,269..271,275..280,347..355,
                     359..364,455..457,464..466,473..478,485..499,548..550,
                     563..568,572..574,578..583,587..589)
                     /gene="LOC139840129"
                     /note="alpha subunit interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:239720"
     misc_feature    order(206..208,254..256,260..262,299..301,602..604)
                     /gene="LOC139840129"
                     /note="active site"
                     /db_xref="CDD:239720"
     polyA_site      987
                     /gene="LOC139840129"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cactacgctt ataactcttc cccttttctt cacttctttc aattcccaaa tcgaaccgct
       61 taaccaaatt catcagccat caaattagcc ctagaattac aacatgagta gcataggcac
      121 aggttatgat ctatccgtta caactttctc accggacggt agggttttcc agatcgaata
      181 cgccgccaaa gccgttgata acagcggtac cgtcgtcgga atcaaatgca aagacggcat
      241 tgttatcgga gtagagaagc tgattgcatc taaaatgatg ttacctggat ctaatcgtag
      301 aattcattcc gtacaccgtc attctggaat gggcgtagct gggttagctg ctgatggcag
      361 acagattgtt gcaagagcta aatctgaagc aaacaactat gaaagcacct atggtgaacc
      421 tattccagtt aaagaacttg ctgagcgtgt tgctagctat gtgcatttat gtacacttta
      481 ttggtggctc agaccctttg gatctggggt tattcttggc ggttatgacc gtgatggccc
      541 acagttgtat atggttgaac cttctggtgt ttcctataga tattttggtg ctgcaattgg
      601 gaagggcagg caggctgcta aaactgagat tgagaagttg aagctttctg agatgacctg
      661 tcgtcaagga gttattgaag tagcaaaaat aatttacgga gtacatgacg aggcaaagga
      721 caagacattt gaattggaga tgagttgggt ttgtgatgaa tcgaaccgtt tgcaccagaa
      781 ggtaccagaa gcacttttgg aggaagcaat atcagcagct aaagcagcat tggaagaaat
      841 ggatgctgat taatacacct gtccttgcat tatgtttgtt tgactcttcc attgcagatt
      901 tgtctgtcat cagtaagata tttaagtttg gttgcactat cacttaaaga ttgtaacatt
      961 tccgttttat tagaacatct taaattc
//
LOCUS       XM_071830358            1223 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840130), transcript variant X1, mRNA.
ACCESSION   XM_071830358
VERSION     XM_071830358.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1223
                     /gene="LOC139840130"
                     /note="uncharacterized LOC139840130; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840130"
     CDS             53..1048
                     /gene="LOC139840130"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686459.1"
                     /db_xref="GeneID:139840130"
                     /translation="MLLLSFTFTTNILPVPGQLPKRGCRYHSHSHSRSFAWKPQPKRP
                     FIWCCSAVKKEQQEESKAASTAAEEVEYQVLSVISSVYNDIIILDTADSRMLLLDSTH
                     NVHSIFMKGEPWTGSYWDEFSSLPPIVPKGPIAIFGLGGGTAAHLMLSLWPSLQLHGW
                     EIDDILIDKSREHLGLSDLEKPNEDGGVLHVHIGDALSDLTTVSGGYAGIVIDLFAGG
                     KVLPQLQEVQTWLKLHDKLMPNGRLIVNCGGSTTANAASTDVENSVNESVQEQNSTLN
                     TLCKAFPDNVNWKKMPKSDGENYLALTGPLPDLTAWTAALPDRLSSSVVQWKSCS"
     misc_feature    <452..958
                     /gene="LOC139840130"
                     /note="Spermidine synthase (polyamine
                     aminopropyltransferase) [Amino acid transport and
                     metabolism]; Region: SpeE; COG0421"
                     /db_xref="CDD:440190"
     polyA_site      1223
                     /gene="LOC139840130"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acacaaaaac tcatcttatc cagaaatata acagttgttt gaacttatca aaatgcttct
       61 attatcattc actttcacta ctaacattct accggttccc ggccagttac ccaaacgggg
      121 ctgccgttat cattctcatt cccattcccg gtcattcgca tggaaaccgc aacccaaaag
      181 gccattcatc tggtgttgct cggctgtaaa aaaggaacaa caagaagaaa gcaaagcagc
      241 atcaacagca gcagaagaag ttgagtatca agtgttgagt gtgattagta gtgtttataa
      301 tgatataatc attcttgata ctgctgattc aagaatgctt cttcttgact ctactcacaa
      361 tgttcatagt atttttatga aaggagaacc atggactggt tcctattggg atgagttttc
      421 tagcttaccg ccaattgttc caaaaggccc gattgcaatt tttggcttgg gtggtggaac
      481 agctgcacat ttgatgctta gcttatggcc ttctttgcag ctacatggat gggaaatcga
      541 tgacattttg attgataaat caagagaaca tctcgggttg tctgatctcg aaaagcctaa
      601 tgaagatggt ggtgttcttc atgttcatat cggcgatgca ctttctgatt taaccactgt
      661 ttccggaggt tacgctggta tagttattga cttgtttgct ggtggaaagg ttttgcccca
      721 attacaagag gtacaaacat ggttgaaact acatgataag ttgatgccta atggtcggct
      781 tatcgtgaat tgtggtggca gcactactgc aaatgcagca tcaactgatg ttgaaaattc
      841 ggttaatgag agcgttcagg aacaaaattc gaccttgaac acattgtgta aagcatttcc
      901 tgacaatgtg aattggaaaa agatgccaaa aagtgatggc gaaaactacc ttgcactaac
      961 ggggcctttg ccagatttga ctgcgtggac tgctgctctt cctgatcggt tgagctcaag
     1021 cgtcgttcaa tggaagtctt gttcataata tttttgatat gttagattta gaccagtccc
     1081 catgatcctt tcaacatgct tgattttgta tatttattca tttatacatg atttgcttgt
     1141 atgatcatgc aatctgtatg atagaattaa ttaaggaaaa ttgtaaattt gttcccttat
     1201 acatgatttg cttgtatgtt caa
//
LOCUS       XM_071830359             853 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840130), transcript variant X2, mRNA.
ACCESSION   XM_071830359
VERSION     XM_071830359.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..853
                     /gene="LOC139840130"
                     /note="uncharacterized LOC139840130; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840130"
     CDS             16..678
                     /gene="LOC139840130"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686460.1"
                     /db_xref="GeneID:139840130"
                     /translation="MNTLTLNDDEFSSLPPIVPKGPIAIFGLGGGTAAHLMLSLWPSL
                     QLHGWEIDDILIDKSREHLGLSDLEKPNEDGGVLHVHIGDALSDLTTVSGGYAGIVID
                     LFAGGKVLPQLQEVQTWLKLHDKLMPNGRLIVNCGGSTTANAASTDVENSVNESVQEQ
                     NSTLNTLCKAFPDNVNWKKMPKSDGENYLALTGPLPDLTAWTAALPDRLSSSVVQWKS
                     CS"
     misc_feature    <82..588
                     /gene="LOC139840130"
                     /note="Spermidine synthase (polyamine
                     aminopropyltransferase) [Amino acid transport and
                     metabolism]; Region: SpeE; COG0421"
                     /db_xref="CDD:440190"
     polyA_site      853
                     /gene="LOC139840130"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgataaccaa tctgaatgaa caccctaact ctaaatgatg atgagttttc tagcttaccg
       61 ccaattgttc caaaaggccc gattgcaatt tttggcttgg gtggtggaac agctgcacat
      121 ttgatgctta gcttatggcc ttctttgcag ctacatggat gggaaatcga tgacattttg
      181 attgataaat caagagaaca tctcgggttg tctgatctcg aaaagcctaa tgaagatggt
      241 ggtgttcttc atgttcatat cggcgatgca ctttctgatt taaccactgt ttccggaggt
      301 tacgctggta tagttattga cttgtttgct ggtggaaagg ttttgcccca attacaagag
      361 gtacaaacat ggttgaaact acatgataag ttgatgccta atggtcggct tatcgtgaat
      421 tgtggtggca gcactactgc aaatgcagca tcaactgatg ttgaaaattc ggttaatgag
      481 agcgttcagg aacaaaattc gaccttgaac acattgtgta aagcatttcc tgacaatgtg
      541 aattggaaaa agatgccaaa aagtgatggc gaaaactacc ttgcactaac ggggcctttg
      601 ccagatttga ctgcgtggac tgctgctctt cctgatcggt tgagctcaag cgtcgttcaa
      661 tggaagtctt gttcataata tttttgatat gttagattta gaccagtccc catgatcctt
      721 tcaacatgct tgattttgta tatttattca tttatacatg atttgcttgt atgatcatgc
      781 aatctgtatg atagaattaa ttaaggaaaa ttgtaaattt gttcccttat acatgatttg
      841 cttgtatgtt caa
//
LOCUS       XM_071830360            2594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 26b (LOC139840131), transcript
            variant X1, mRNA.
ACCESSION   XM_071830360
VERSION     XM_071830360.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2594
                     /gene="LOC139840131"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 26b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840131"
     CDS             742..2151
                     /gene="LOC139840131"
                     /codon_start=1
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 26b isoform X1"
                     /protein_id="XP_071686461.1"
                     /db_xref="GeneID:139840131"
                     /translation="MAVSKSSVRMDYWREYFRSADANIFEIIEGAIMLAASDCPKEFK
                     ARRDTIAQILYTCKLIKCSGCDREELALPVDNNEEYNDHHDHDHDHGDDGDEGVKYKS
                     NLSDANVNYSKESSKVINCSRNNDDDDEYENDDDDDDDEHHHDVEANDHVSKYSYGDA
                     EALTDEIEEESQTFNEVLRIKEIVDNSSDESSSVLCNSLRKLQLMAISVETLKATEIG
                     KSVNVLRKHTSKDIRQIARKLIEVWKDMVDEWVDATNKATTVSENTPESINPSVLDEE
                     EGLPSPPLEDLAFLDPHSMSLELNEFFDGMDDYGNLRKSNEFNKNGNNGRKPPVEKQN
                     ITKWAQQKPSNGSNMAPKPDVVKPSRPPVFDATPRRRTPNVDRKLQNLEKPTSPNGPV
                     TPQQRKLMSSNEEIEKDKLEATKRKLQERYQQAEKAKKQRTIQVMELHDLPKQNVLTK
                     NQHTRPGSNHNRNRMHGRF"
     misc_feature    1267..1485
                     /gene="LOC139840131"
                     /note="N-terminal domain (domain I) of transcription
                     elongation factor S-II (TFIIS); similar to a domain found
                     in elongin A and CRSP70; likely to be involved in
                     transcription; domain I from TFIIS interacts with RNA
                     polymerase II holoenzyme; Region: TFIIS_I; cd00183"
                     /db_xref="CDD:238107"
     misc_feature    order(1285..1290,1297..1299,1414..1419)
                     /gene="LOC139840131"
                     /note="putative RNA polymerase binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:238107"
ORIGIN      
        1 aagagaaatc tgaataataa aaattctact tttcacactc tgccttgcgt acacctacac
       61 cctcctattc cctccctcca tccactgaat caatctaacc attattattc ttacaaccat
      121 tttttaattg atttcggatt ttttaatctt atcccccttt gattatttca tgacacccaa
      181 tttggtgttt tcaataatat atattttgac atatcaagac ttttttattt ctagttgaat
      241 cgtagctttg ttggagtttt ttctttgttt gattaatttc tccaaaaaag aaacttattt
      301 gaggttttag gtttatgggt ataatcaaga tcgaataaag tttcgatttt gatatctggg
      361 tttgaacaaa tttgtcgata acttgagatt tcaagtttat ggttatgatc aggattagtt
      421 aaagtttcta ttttgatatc tgggttgaat caaatttgct ttaaatttga gggtttaggg
      481 tctgatccgt taaagtttcg atttttcatc tctaggtttg atcattttgt agtgaatttg
      541 cagttttaga attctgggta taatcaggat tggctaaagt ttcaaatttg atatccgggt
      601 ttggtcaaat ttgctctgac ttcgagtctt tagattaatg cgtttgatcg aaatcagtta
      661 aagttctaat tttgatatct attagtcatc aagattaatc ctggtggatt ttagcttgtg
      721 agcttggtgg ggtctgttta tatggcggtt tcgaaatctt ctgtaaggat ggattactgg
      781 agggagtatt ttcgtagtgc tgatgctaac atattcgaaa taattgaagg agcaatcatg
      841 ttagctgctt ctgattgccc aaaagaattt aaagctagga gagatacaat tgctcaaatt
      901 ttatatactt gtaaattgat taagtgttct ggttgtgata gagaggaatt agccttacct
      961 gtagataata atgaagaata taatgatcat catgatcatg atcatgatca tggtgatgat
     1021 ggtgatgagg gagttaagta taagagtaat ctaagtgatg ctaatgtgaa ttatagtaaa
     1081 gagagcagca aagtgattaa ttgttctaga aataacgatg atgacgacga atatgaaaat
     1141 gatgatgatg atgatgatga tgagcatcat catgatgtgg aggctaatga tcatgttagc
     1201 aagtacagtt atggagatgc agaagctcta accgatgaaa ttgaagaaga atcacaaact
     1261 tttaatgagg ttttgaggat caaagaaatt gttgacaaca gctcagatga gtcttcatcg
     1321 gttctatgca attcgttaag gaagcttcaa ttgatggcaa tatctgtaga gacactcaag
     1381 gcaactgaaa ttggaaaatc tgtaaatgtt cttcggaagc atacatcaaa ggatattcgc
     1441 caaattgcaa ggaaactaat tgaggtgtgg aaggatatgg ttgatgagtg ggtggatgct
     1501 actaataagg cgactacagt ttccgagaat acccctgagt caataaatcc atcggttctt
     1561 gatgaagagg aaggtttgcc ttcacctcct ctagaagatt tagcatttct ggacccacac
     1621 tcgatgtcat tggagctaaa tgagttcttt gatggcatgg atgattatgg aaatcttaga
     1681 aaaagcaatg aatttaacaa gaatggtaat aacgggagaa aaccgccagt tgagaagcaa
     1741 aacataacca agtgggcaca acagaaaccg tcaaatgggt caaacatggc tccaaaacca
     1801 gatgtggtca aaccgagtag acctccggtt tttgacgcaa caccgagacg caggactcca
     1861 aatgtggacc gaaagttgca aaaccttgaa aaaccaactt ctcctaacgg acccgtaact
     1921 cctcaacaac gtaaactgat gtcatcaaat gaggaaattg aaaaagacaa gcttgaagca
     1981 acaaagagga agctccaaga acgatatcaa caagcggaaa aagcgaagaa gcagcgaacc
     2041 atacaagtta tggagctgca tgatcttcca aagcagaacg ttttaacgaa aaaccagcac
     2101 acgaggcccg gaagcaacca taacagaaac cggatgcacg ggcggtttta ggtgttggtc
     2161 aaaacagtca tctgatcggt tttgtggacc ctacgggtcg cgaccaagtg actagtttaa
     2221 gaccagacgc ggatatgcag aggaatttat tgactttcta cggataagat ttgggggtgt
     2281 ttgttagctt agttatcaag tggaatgagt cacatttgac tttgttgtgt aggaatagca
     2341 actacaacca ccctttcctt tagtgacttt ctaaattggc tggctagggt tggagcaggg
     2401 gcccacccac ccattcttga gagcacatat aaaataagtg cattttagta gtcagttgca
     2461 tgtggtgtac aacatgtgat ccattagaag tatattaaat tctgtttttt ttttttatta
     2521 ttcccctgat ccctgtattt gtttggtatg ttattatatt atcatctttc atctaatcta
     2581 ataataatca cttt
//
LOCUS       XM_071830361            2591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 26b (LOC139840131), transcript
            variant X2, mRNA.
ACCESSION   XM_071830361
VERSION     XM_071830361.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2591
                     /gene="LOC139840131"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 26b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840131"
     CDS             742..2148
                     /gene="LOC139840131"
                     /codon_start=1
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 26b isoform X2"
                     /protein_id="XP_071686462.1"
                     /db_xref="GeneID:139840131"
                     /translation="MAVSKSSVRMDYWREYFRSADANIFEIIEGAIMLAASDCPKEFK
                     ARRDTIAQILYTCKLIKCSGCDREELALPVDNNEEYNDHHDHDHDHGDDGDEGVKYKS
                     NLSDANVNYSKESSKVINCSRNNDDDDEYENDDDDDDDEHHHDVEANDHVSKYSYGDA
                     EALTDEIEEESQTFNEVLRIKEIVDNSSDESSSVLCNSLRKLQLMAISVETLKATEIG
                     KSVNVLRKHTSKDIRQIARKLIEVWKDMVDEWVDATNKATISENTPESINPSVLDEEE
                     GLPSPPLEDLAFLDPHSMSLELNEFFDGMDDYGNLRKSNEFNKNGNNGRKPPVEKQNI
                     TKWAQQKPSNGSNMAPKPDVVKPSRPPVFDATPRRRTPNVDRKLQNLEKPTSPNGPVT
                     PQQRKLMSSNEEIEKDKLEATKRKLQERYQQAEKAKKQRTIQVMELHDLPKQNVLTKN
                     QHTRPGSNHNRNRMHGRF"
     misc_feature    1267..1485
                     /gene="LOC139840131"
                     /note="N-terminal domain (domain I) of transcription
                     elongation factor S-II (TFIIS); similar to a domain found
                     in elongin A and CRSP70; likely to be involved in
                     transcription; domain I from TFIIS interacts with RNA
                     polymerase II holoenzyme; Region: TFIIS_I; cd00183"
                     /db_xref="CDD:238107"
     misc_feature    order(1285..1290,1297..1299,1414..1419)
                     /gene="LOC139840131"
                     /note="putative RNA polymerase binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:238107"
ORIGIN      
        1 aagagaaatc tgaataataa aaattctact tttcacactc tgccttgcgt acacctacac
       61 cctcctattc cctccctcca tccactgaat caatctaacc attattattc ttacaaccat
      121 tttttaattg atttcggatt ttttaatctt atcccccttt gattatttca tgacacccaa
      181 tttggtgttt tcaataatat atattttgac atatcaagac ttttttattt ctagttgaat
      241 cgtagctttg ttggagtttt ttctttgttt gattaatttc tccaaaaaag aaacttattt
      301 gaggttttag gtttatgggt ataatcaaga tcgaataaag tttcgatttt gatatctggg
      361 tttgaacaaa tttgtcgata acttgagatt tcaagtttat ggttatgatc aggattagtt
      421 aaagtttcta ttttgatatc tgggttgaat caaatttgct ttaaatttga gggtttaggg
      481 tctgatccgt taaagtttcg atttttcatc tctaggtttg atcattttgt agtgaatttg
      541 cagttttaga attctgggta taatcaggat tggctaaagt ttcaaatttg atatccgggt
      601 ttggtcaaat ttgctctgac ttcgagtctt tagattaatg cgtttgatcg aaatcagtta
      661 aagttctaat tttgatatct attagtcatc aagattaatc ctggtggatt ttagcttgtg
      721 agcttggtgg ggtctgttta tatggcggtt tcgaaatctt ctgtaaggat ggattactgg
      781 agggagtatt ttcgtagtgc tgatgctaac atattcgaaa taattgaagg agcaatcatg
      841 ttagctgctt ctgattgccc aaaagaattt aaagctagga gagatacaat tgctcaaatt
      901 ttatatactt gtaaattgat taagtgttct ggttgtgata gagaggaatt agccttacct
      961 gtagataata atgaagaata taatgatcat catgatcatg atcatgatca tggtgatgat
     1021 ggtgatgagg gagttaagta taagagtaat ctaagtgatg ctaatgtgaa ttatagtaaa
     1081 gagagcagca aagtgattaa ttgttctaga aataacgatg atgacgacga atatgaaaat
     1141 gatgatgatg atgatgatga tgagcatcat catgatgtgg aggctaatga tcatgttagc
     1201 aagtacagtt atggagatgc agaagctcta accgatgaaa ttgaagaaga atcacaaact
     1261 tttaatgagg ttttgaggat caaagaaatt gttgacaaca gctcagatga gtcttcatcg
     1321 gttctatgca attcgttaag gaagcttcaa ttgatggcaa tatctgtaga gacactcaag
     1381 gcaactgaaa ttggaaaatc tgtaaatgtt cttcggaagc atacatcaaa ggatattcgc
     1441 caaattgcaa ggaaactaat tgaggtgtgg aaggatatgg ttgatgagtg ggtggatgct
     1501 actaataagg cgactatttc cgagaatacc cctgagtcaa taaatccatc ggttcttgat
     1561 gaagaggaag gtttgccttc acctcctcta gaagatttag catttctgga cccacactcg
     1621 atgtcattgg agctaaatga gttctttgat ggcatggatg attatggaaa tcttagaaaa
     1681 agcaatgaat ttaacaagaa tggtaataac gggagaaaac cgccagttga gaagcaaaac
     1741 ataaccaagt gggcacaaca gaaaccgtca aatgggtcaa acatggctcc aaaaccagat
     1801 gtggtcaaac cgagtagacc tccggttttt gacgcaacac cgagacgcag gactccaaat
     1861 gtggaccgaa agttgcaaaa ccttgaaaaa ccaacttctc ctaacggacc cgtaactcct
     1921 caacaacgta aactgatgtc atcaaatgag gaaattgaaa aagacaagct tgaagcaaca
     1981 aagaggaagc tccaagaacg atatcaacaa gcggaaaaag cgaagaagca gcgaaccata
     2041 caagttatgg agctgcatga tcttccaaag cagaacgttt taacgaaaaa ccagcacacg
     2101 aggcccggaa gcaaccataa cagaaaccgg atgcacgggc ggttttaggt gttggtcaaa
     2161 acagtcatct gatcggtttt gtggacccta cgggtcgcga ccaagtgact agtttaagac
     2221 cagacgcgga tatgcagagg aatttattga ctttctacgg ataagatttg ggggtgtttg
     2281 ttagcttagt tatcaagtgg aatgagtcac atttgacttt gttgtgtagg aatagcaact
     2341 acaaccaccc tttcctttag tgactttcta aattggctgg ctagggttgg agcaggggcc
     2401 cacccaccca ttcttgagag cacatataaa ataagtgcat tttagtagtc agttgcatgt
     2461 ggtgtacaac atgtgatcca ttagaagtat attaaattct gttttttttt tttattattc
     2521 ccctgatccc tgtatttgtt tggtatgtta ttatattatc atctttcatc taatctaata
     2581 ataatcactt t
//
LOCUS       XM_071830362            2787 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative SWI/SNF-related
            matrix-associated actin-dependent regulator of chromatin subfamily
            A member 3-like 1 (LOC139840132), mRNA.
ACCESSION   XM_071830362
VERSION     XM_071830362.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2787
                     /gene="LOC139840132"
                     /note="putative SWI/SNF-related matrix-associated
                     actin-dependent regulator of chromatin subfamily A member
                     3-like 1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139840132"
     CDS             16..2559
                     /gene="LOC139840132"
                     /codon_start=1
                     /product="putative SWI/SNF-related matrix-associated
                     actin-dependent regulator of chromatin subfamily A member
                     3-like 1"
                     /protein_id="XP_071686463.1"
                     /db_xref="GeneID:139840132"
                     /translation="MSLYQSTLAYIEDEEEDQDQSTQSQSQSQSDTYMVGFIIANIVG
                     LQYYSGRISGREMVGLVREPMNQYDSNAIKVLNTRTIQVGHIEKKVASVLAPLIDSNL
                     IHVEGIVPKPSKKGNMYKIPCHVHVFTKLDAFETVKSAFWQSGLSLLSENSPLFSTSE
                     SMVVKEKKKGDVDEIFKLVDENLSQNKVNGIMEPPKDLILPDLFLHQKEGLYWLYHRE
                     NSDELPPFWEVKDGVFVNVLTHYETDKRPEPLRGGIFADDMGLGKTLTLLSLIALDKC
                     NASNDGKIEVIADETKPLVISSGKRSRKGKVIQTGSRSKKQKIEDYVGQRGSKMTLIV
                     CPPSVFSTWITQLTDHTKRGMLKAYMYYGERTQDVLELQKYDIVLTTYSTLSYDLESS
                     NSKSPIKKIEWWRVILDEAHIIKNHKSKQSEAVNKLNAKRRWVVTGTPIQNGSMDLFS
                     LMAFLRFDPFSTKSYWDSLVQRPIVQGNAKGLSRLQALMATISLRRTKEKALIGLPSK
                     TIHICNVELSEDERKVYDEMEFEAKKFVTGYIERGMVTRHYSTVLSIILRLRQICTHM
                     ELVPSDVRSSISSYNFEDASNNPELLKKLVILLQDSEDIDCPICLSPPSKIIITCCAH
                     IFCQNCITRTLNSKALCPLCRRKLSESDLFAPPPEFNPEVDNSSYQSSSKMAALIELL
                     KGTRNENPSIKSVVFSQFRKLLLLLEEPLKKAGFKTLRLDGVMNAKKRANVMKEFEAP
                     NPDGPTILLASLKASGTGINLTAASRVYLMEPWWNPAVEAQAMDRVHRIGQKEEVKIV
                     KMIAKNSIDERITLLQEKKQKLAKEAFGKKGKEEKREINLDDLRTLMSL"
     misc_feature    118..411
                     /gene="LOC139840132"
                     /note="HIRAN domain; Region: HIRAN; pfam08797"
                     /db_xref="CDD:400928"
     misc_feature    <592..2493
                     /gene="LOC139840132"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     Region: HepA; COG0553"
                     /db_xref="CDD:440319"
     misc_feature    622..1503
                     /gene="LOC139840132"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(790..810,1240..1242)
                     /gene="LOC139840132"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
     misc_feature    1822..1974
                     /gene="LOC139840132"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(1834..1836,1843..1845,1879..1881,1885..1887,
                     1894..1896,1903..1905,1936..1938,1945..1947)
                     /gene="LOC139840132"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438111"
ORIGIN      
        1 acccttaaac tcaagatgag tctctatcaa tcaactctcg cttacattga agatgaagaa
       61 gaagatcaag atcaatctac acaatcgcaa tctcaatcac aatctgatac atacatggta
      121 ggttttataa ttgcaaacat tgttggatta caatattatt ctggcagaat tagtggccgt
      181 gagatggtag gtcttgttcg agaaccaatg aatcagtacg attcgaatgc gattaaagtg
      241 cttaatactc gaacaataca agttgggcat attgaaaaga aggtagctag tgttcttgct
      301 cctttaattg actctaattt gattcatgtt gaaggtattg taccaaaacc ctcgaaaaag
      361 ggcaatatgt acaaaatccc ttgtcatgtt catgttttta cgaaattgga tgcatttgaa
      421 actgttaaat ctgcattttg gcaatctggg ttgtctttat tatctgaaaa tagtcctttg
      481 ttcagtacct ctgaatctat ggttgtgaaa gaaaagaaaa aaggtgatgt tgatgaaatc
      541 tttaagttgg ttgatgaaaa tttgagtcaa aataaggtca atggaattat ggaaccacca
      601 aaagatttga tcttgcctga tctttttctt catcagaagg aaggtttgta ttggctgtat
      661 catcgtgaaa actccgatga attacctccg ttttgggagg tgaaagatgg tgtgttcgtg
      721 aacgtgttaa cgcattatga aactgataaa cgacccgagc ctttacgtgg tgggatattt
      781 gcagatgata tgggattggg taaaactctt actttacttt ctttaattgc tttggataaa
      841 tgtaacgctt caaacgatgg aaagattgaa gtaatagcag atgaaactaa gccgttagtt
      901 atctcaagtg ggaagaggtc gagaaagggg aaagtgatcc aaactggtag tcgtagcaag
      961 aaacaaaaaa tagaagatta tgttggtcaa aggggctcaa aaatgacgtt gattgtttgt
     1021 ccaccttctg ttttttcaac ttggataaca caattaacag atcacactaa acgcgggatg
     1081 ttaaaggcgt acatgtacta tggggaacga actcaagatg ttttagagct tcaaaagtat
     1141 gatatagtgt tgaccacgta tagtacttta agttatgacc ttgaatcgtc gaatagtaag
     1201 agtcccatta agaagattga atggtggcga gtgattttgg atgaggcaca tataatcaag
     1261 aatcataagt caaaacaaag tgaggctgtt aataagttga atgctaaaag gcgatgggtt
     1321 gttaccggaa caccaataca aaatggttcc atggacttat tctctttaat ggcgttttta
     1381 agatttgatc cgttttcgac gaaaagctat tgggatagct tggtgcaacg cccaattgtt
     1441 caaggaaacg caaaggggct ctcaaggctc caggcgttaa tggcaactat ttcattgaga
     1501 cgcacaaaag aaaaggcttt aattgggctg ccttcgaaaa ctatacatat atgtaacgta
     1561 gagctttctg aagacgaacg taaggtgtac gatgagatgg aatttgaagc caagaaattt
     1621 gttactggct atatcgagag aggaatggtg acacgtcatt actctactgt tttaagcatc
     1681 attttacgtc ttcgccaaat atgtacacac atggaattag tcccttcaga tgttagatca
     1741 tcaatttcat cctacaattt tgaagatgca tctaacaacc cggaacttct aaagaagcta
     1801 gttatactac ttcaagatag tgaagacatc gattgtccga tttgcctatc tccaccgtcg
     1861 aagattatta ttacgtgttg tgctcacatt ttttgtcaaa attgcatcac ccgaacccta
     1921 aattcgaaag ctttatgtcc gctatgcaga cgtaaattgt ctgaatccga ccttttcgca
     1981 ccaccaccgg agttcaaccc cgaggttgat aattcaagct atcagtcttc ttctaaaatg
     2041 gcagctctta tagaactttt aaagggaaca agaaacgaaa acccatcaat aaaatccgtt
     2101 gtattctctc agtttcgtaa gttgctactt ttacttgaag aaccgttaaa aaaggcgggc
     2161 ttcaaaacgt tgcgtttgga cggggtaatg aatgccaaga agagagcgaa tgtgatgaaa
     2221 gaatttgaag ctccaaaccc ggatgggccc acaattttgc tggcgagtct taaagcttcg
     2281 ggtacgggta taaacctgac tgcagcttca agagtgtact taatggaacc atggtggaac
     2341 ccggcagttg aagcacaagc gatggatcgt gttcatagaa tcgggcaaaa ggaggaagta
     2401 aagattgtga aaatgattgc taaaaatagc atagatgagc ggataacgtt gttacaagag
     2461 aaaaaacaaa agttagcgaa ggaagcgttc ggtaaaaaag gaaaggagga gaaaagagaa
     2521 ataaatttag atgatcttcg tacgttgatg tcactgtgaa aaatacaaat atgtgcagta
     2581 gtttctgtgt agttttttgg aacttaaatg gattgttcgg ctttttgtgt ttaggattca
     2641 caacagtgaa gtttgttatg cacttttcac ttttctactg tgttttttga ttacttttcc
     2701 taccattttg tttgaccaac tttttgcaac atattatttt taattgggac ccggataatt
     2761 ttcgttctgt atatatagat gatcaat
//
LOCUS       XM_071830363            1631 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides S-adenosylmethionine
            decarboxylase proenzyme-like (LOC139840133), mRNA.
ACCESSION   XM_071830363
VERSION     XM_071830363.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1631
                     /gene="LOC139840133"
                     /note="S-adenosylmethionine decarboxylase proenzyme-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 26 Proteins"
                     /db_xref="GeneID:139840133"
     CDS             286..1362
                     /gene="LOC139840133"
                     /codon_start=1
                     /product="S-adenosylmethionine decarboxylase
                     proenzyme-like"
                     /protein_id="XP_071686464.1"
                     /db_xref="GeneID:139840133"
                     /translation="MSAIGFEGFEKRLEICFFNPGPSADPEARGLRALTRTQIDEFLA
                     PAECTIVSSLSNDEVDSYVLSESSLFIYSYKIIIKTCGTTKLLLSIPPILELSGELSL
                     SVKSVRYTRGSFIFPGAQVFPHRSFAEEVMVLDDHFGNLGMKSNAYVIGGVDNDQKWH
                     VYSATAESADPVNPMSPVYSLEMCMTGLSKRNASVFFKSESSSAAVMTQDSGIRKILP
                     ESKICDFDFDPCGYSMNAIEGDAISTIHVTPEDGFSYASFEAVGYDFKSMDLTGLIER
                     VLACFQPSEFSVALHGNNDLKELNLVENDPNVKGYCVEETIFEALGESGGSMVYFKFA
                     RGGSTCGSPRSTLHTCWSETDNEE"
     misc_feature    286..1359
                     /gene="LOC139840133"
                     /note="S-adenosylmethionine decarboxylase; Region:
                     PLN02524"
                     /db_xref="CDD:215287"
     polyA_site      1631
                     /gene="LOC139840133"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attgaatgat caatggagtc aaaagctgga aagaagtcta gtagtaaatc cttatgttac
       61 gaagctcccc taggttacgt tattgaagac gttcgaccaa acggcggtct cgaaaagttc
      121 aaatctgctg tgtactctaa ctgcacccgc aagccttcct gattacctat accaatacta
      181 cataaccccc ggatagaatt attcggatta tttattttgc tacagccttt tcatttttct
      241 ttcattccct gtttcctttt ttacaaaaca actttttaaa acaagatgtc ggccattgga
      301 ttcgaaggct tcgaaaagag gctcgaaatt tgctttttta accctggccc atctgctgac
      361 cctgaggcca gaggcttgcg tgcgttgacc aggacccaaa tcgacgagtt tctggcacct
      421 gcagaatgca ccattgtttc ttcattatca aacgatgaag tggattccta tgttctgtct
      481 gaatccagtc tgtttatcta ctcatataag atcattatta aaacttgtgg gaccactaag
      541 ctgctccttt cgatcccacc tatacttgaa ttatccggtg aactgtcact tagtgtgaaa
      601 tccgttagat atactcgagg aagcttcata ttccctgggg cccaggtgtt tcctcatcgt
      661 agcttcgctg aagaagtaat ggtactcgat gaccattttg gcaatttggg tatgaaaagc
      721 aatgcatatg ttattggtgg tgttgacaat gatcagaaat ggcatgtata ctctgctaca
      781 gctgaatcag cagatcctgt taacccaatg agcccagtct acagtttaga gatgtgtatg
      841 acgggtttaa gtaagagaaa cgcatcggtg tttttcaaat ctgagtcaag ttctgctgct
      901 gtgatgactc aagattcagg gataagaaag attcttcccg aatcaaaaat ttgtgatttt
      961 gactttgacc cgtgtgggta ctcgatgaat gctattgaag gagacgcgat atccaccatt
     1021 cacgtgacac cagaagacgg gttcagttac gctagctttg aagcagttgg ttatgacttt
     1081 aagtcaatgg atttgaccgg tttgattgaa agagtgttgg cttgttttca gcctagtgaa
     1141 ttctctgtcg ctttgcatgg taataatgac ttgaaagagc tcaacttggt tgagaatgat
     1201 cctaatgtga aagggtattg tgttgaagag acaatctttg aagctttggg tgaatcaggc
     1261 ggttcgatgg tgtactttaa gtttgcaagg ggaggaagta cttgtgggtc tcctaggtca
     1321 actctgcata cttgttggag tgaaactgac aacgaggaat gagatgttgg gtggatgaag
     1381 taatactacg ttcgtgtctc gtgtgggttg tgttgttgaa caaggcatct ggttggtgtg
     1441 tagttactgt ttacattctg caggtgtcga taaacttagg ggtattattg cttctatcta
     1501 tggtgtttac tatctatttc tgttgggtca tttatattgt ttttgttttt gcaatttgct
     1561 ccaagatctc tagaaatttg tatgtgactt gtttctaatt attatagcta tggtgattgg
     1621 caatttgcat a
//
LOCUS       XR_011757240            1155 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840135), transcript variant X1, ncRNA.
ACCESSION   XR_011757240
VERSION     XR_011757240.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139840135"
                     /note="uncharacterized LOC139840135; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840135"
     ncRNA           1..1155
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840135"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840135"
ORIGIN      
        1 atctggcgtt aaattagggc aaacaactct aaaaccgtca cacacacgtt ctcttttcac
       61 tctcctctcc aattgtcttc gagttcttta tagcaaatga agtcttctca catctaccat
      121 atcttaagtc aggtatgaaa taactgttgt atattctaaa aatttatttc tgtttgattt
      181 gtatgttcct ttcactacgg attaagaaag ccaaataagt tttgtgagaa tcgcgatttc
      241 ggctttccat tatcaagctt tgctgacggt caatcacaga cttccgtgtt aggatgcaac
      301 aaggttggtg atgaaggtgg ttttgctcct aatattcaga aaacaaaaag ggccttgagt
      361 agctcatgac agctattgct aagctggtcc gacttgtggt ggtatttaat ttcaagagta
      421 agtataaatt atgttatagt aaatcaagat tcgggttgag taataaatca agtagcctat
      481 tgtgtccagg caatatccat ttgagcaata ttattgagac gcactatcga aaaaatacct
      541 gagaatgtcg tgacaaagtt catattgttg gatacgatct ttaggtcact aaccctacag
      601 ttataatttt tgcttctaat ctttaaatac tcaaaagctt agatttaatg ttcactaacc
      661 ttctggattg tataaactca cctaaattac atattcaaat tgtgttacag agagttaaga
      721 tgaaaatctc caagaagact tgtgacaccc ttctcctcaa gataacaaga gatgttcagt
      781 ttgttgattc aaatatccaa ctttagacaa gttatccgat gattcaataa cgtcaacgat
      841 tatttgagac ttattcgaac ctggccaccc atttgatgaa tacatggatg atgaacaatt
      901 cgcttgtata tcacatgctt aaaatgttaa ttggtgacac tgaaaggctg ccgaaggaga
      961 tggaacttgc aaataggctg cttggatttg gttgggtgga agtggtgctc aactttttag
     1021 tttcagttta agatgatgcg caagaagtta ataaagttat tggaactgtc gctactggat
     1081 tgaatcttgt gtgcataaac tttgatcatt taatgtagat gcatttgtgt tttgattcac
     1141 attttgagac aacta
//
LOCUS       XR_011757241            1186 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840135), transcript variant X2, ncRNA.
ACCESSION   XR_011757241
VERSION     XR_011757241.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1186
                     /gene="LOC139840135"
                     /note="uncharacterized LOC139840135; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840135"
     ncRNA           1..1186
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840135"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840135"
ORIGIN      
        1 atctggcgtt aaattagggc aaacaactct aaaaccgtca cacacacgtt ctcttttcac
       61 tctcctctcc aattgtcttc gagttcttta tagcaaatga agtcttctca catctaccat
      121 atcttaagtc aggtatgaaa taactgttgt atattctaaa aatttatttc tgtttgattt
      181 gtatgttcct ttcactacgg attaagaaag ccaaataagt tttgtgagaa tcgcgatttc
      241 ggctttccat tatcaagctt tgctgacggt caatcacaga cttccgtgtt agtctgttat
      301 taactctaat taaatatggg caggatgcaa caaggttggt gatgaaggtg gttttgctcc
      361 taatattcag aaaacaaaaa gggccttgag tagctcatga cagctattgc taagctggtc
      421 cgacttgtgg tggtatttaa tttcaagagt aagtataaat tatgttatag taaatcaaga
      481 ttcgggttga gtaataaatc aagtagccta ttgtgtccag gcaatatcca tttgagcaat
      541 attattgaga cgcactatcg aaaaaatacc tgagaatgtc gtgacaaagt tcatattgtt
      601 ggatacgatc tttaggtcac taaccctaca gttataattt ttgcttctaa tctttaaata
      661 ctcaaaagct tagatttaat gttcactaac cttctggatt gtataaactc acctaaatta
      721 catattcaaa ttgtgttaca gagagttaag atgaaaatct ccaagaagac ttgtgacacc
      781 cttctcctca agataacaag agatgttcag tttgttgatt caaatatcca actttagaca
      841 agttatccga tgattcaata acgtcaacga ttatttgaga cttattcgaa cctggccacc
      901 catttgatga atacatggat gatgaacaat tcgcttgtat atcacatgct taaaatgtta
      961 attggtgaca ctgaaaggct gccgaaggag atggaacttg caaataggct gcttggattt
     1021 ggttgggtgg aagtggtgct caacttttta gtttcagttt aagatgatgc gcaagaagtt
     1081 aataaagtta ttggaactgt cgctactgga ttgaatcttg tgtgcataaa ctttgatcat
     1141 ttaatgtaga tgcatttgtg ttttgattca cattttgaga caacta
//
LOCUS       XR_011757242            1083 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840135), transcript variant X3, ncRNA.
ACCESSION   XR_011757242
VERSION     XR_011757242.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1083
                     /gene="LOC139840135"
                     /note="uncharacterized LOC139840135; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840135"
     ncRNA           1..1083
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840135"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840135"
ORIGIN      
        1 atctggcgtt aaattagggc aaacaactct aaaaccgtca cacacacgtt ctcttttcac
       61 tctcctctcc aattgtcttc gagttcttta tagcaaatga agtcttctca catctaccat
      121 atcttaagtc aggtatgaaa taactgttgt atattctaaa aatttatttc tgtttgattt
      181 gtatgttcct ttcactacgg attaagaaag ccaaataagt tttgtgagaa tcgcgatttc
      241 ggctttccat tatcaagctt tgctgacggt caatcacaga cttccgtgtt aggatgcaac
      301 aaggttggtg atgaaggtgg ttttgctcct aatattcaga aaacaaaaag ggccttgagt
      361 agctcatgac agctattgct aagctggtcc gacttgtggt ggtatttaat ttcaagagca
      421 atatccattt gagcaatatt attgagacgc actatcgaaa aaatacctga gaatgtcgtg
      481 acaaagttca tattgttgga tacgatcttt aggtcactaa ccctacagtt ataatttttg
      541 cttctaatct ttaaatactc aaaagcttag atttaatgtt cactaacctt ctggattgta
      601 taaactcacc taaattacat attcaaattg tgttacagag agttaagatg aaaatctcca
      661 agaagacttg tgacaccctt ctcctcaaga taacaagaga tgttcagttt gttgattcaa
      721 atatccaact ttagacaagt tatccgatga ttcaataacg tcaacgatta tttgagactt
      781 attcgaacct ggccacccat ttgatgaata catggatgat gaacaattcg cttgtatatc
      841 acatgcttaa aatgttaatt ggtgacactg aaaggctgcc gaaggagatg gaacttgcaa
      901 ataggctgct tggatttggt tgggtggaag tggtgctcaa ctttttagtt tcagtttaag
      961 atgatgcgca agaagttaat aaagttattg gaactgtcgc tactggattg aatcttgtgt
     1021 gcataaactt tgatcattta atgtagatgc atttgtgttt tgattcacat tttgagacaa
     1081 cta
//
LOCUS       XR_011757243             862 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840135), transcript variant X4, ncRNA.
ACCESSION   XR_011757243
VERSION     XR_011757243.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..862
                     /gene="LOC139840135"
                     /note="uncharacterized LOC139840135; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840135"
     ncRNA           1..862
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840135"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840135"
ORIGIN      
        1 atctggcgtt aaattagggc aaacaactct aaaaccgtca cacacacgtt ctcttttcac
       61 tctcctctcc aattgtcttc gagttcttta tagcaaatga agtcttctca catctaccat
      121 atcttaagtc aggtatgaaa taactgttgt atattctaaa aatttatttc tgtttgattt
      181 gtatgttcct ttcactacgg attaagaaag ccaaataagt tttgtgagaa tcgcgatttc
      241 ggctttccat tatcaagctt tgctgacggt caatcacaga cttccgtgtt aggatgcaac
      301 aaggttggtg atgaaggtgg ttttgctcct aatattcaga aaacaaaaag ggccttgagt
      361 agctcatgac agctattgct aagctggtcc gacttgtggt ggtatttaat ttcaagaaga
      421 gttaagatga aaatctccaa gaagacttgt gacacccttc tcctcaagat aacaagagat
      481 gttcagtttg ttgattcaaa tatccaactt tagacaagtt atccgatgat tcaataacgt
      541 caacgattat ttgagactta ttcgaacctg gccacccatt tgatgaatac atggatgatg
      601 aacaattcgc ttgtatatca catgcttaaa atgttaattg gtgacactga aaggctgccg
      661 aaggagatgg aacttgcaaa taggctgctt ggatttggtt gggtggaagt ggtgctcaac
      721 tttttagttt cagtttaaga tgatgcgcaa gaagttaata aagttattgg aactgtcgct
      781 actggattga atcttgtgtg cataaacttt gatcatttaa tgtagatgca tttgtgtttt
      841 gattcacatt ttgagacaac ta
//
LOCUS       XR_011757244            1044 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840135), transcript variant X5, ncRNA.
ACCESSION   XR_011757244
VERSION     XR_011757244.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1044
                     /gene="LOC139840135"
                     /note="uncharacterized LOC139840135; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840135"
     ncRNA           1..1044
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840135"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840135"
ORIGIN      
        1 atctggcgtt aaattagggc aaacaactct aaaaccgtca cacacacgtt ctcttttcac
       61 tctcctctcc aattgtcttc gagttcttta tagcaaatga agtcttctca catctaccat
      121 atcttaagtc aggtatgaaa taactgttgt atattctaaa aatttatttc tgtttgattt
      181 gtatgttcct ttcactacgg attaagaaag ccaaataagt tttgtgagaa tcgcgatttc
      241 ggctttccat tatcaagctt tgctgacggt caatcacaga cttccgtgtt aggatgcaac
      301 aaggttggtg atgaaggtgg ttttgctcct aatattcaga aaacaaaaag ggccttgagt
      361 agctcatgac agctattgct aagctggtcc gacttgtggt ggtatttaat ttcaagagta
      421 agtataaatt atgttatagt aaatcaagat tcgggttgag taataaatca agtagcctat
      481 tgtgtccagg caatatccat ttgagcaata ttattgagac gcactatcga aaaaatacct
      541 gagaatgtcg tgacaaagtt catattgttg gatacgatct ttaggtcact aaccctacaa
      601 gagttaagat gaaaatctcc aagaagactt gtgacaccct tctcctcaag ataacaagag
      661 atgttcagtt tgttgattca aatatccaac tttagacaag ttatccgatg attcaataac
      721 gtcaacgatt atttgagact tattcgaacc tggccaccca tttgatgaat acatggatga
      781 tgaacaattc gcttgtatat cacatgctta aaatgttaat tggtgacact gaaaggctgc
      841 cgaaggagat ggaacttgca aataggctgc ttggatttgg ttgggtggaa gtggtgctca
      901 actttttagt ttcagtttaa gatgatgcgc aagaagttaa taaagttatt ggaactgtcg
      961 ctactggatt gaatcttgtg tgcataaact ttgatcattt aatgtagatg catttgtgtt
     1021 ttgattcaca ttttgagaca acta
//
LOCUS       XR_011757245            1029 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840135), transcript variant X6, ncRNA.
ACCESSION   XR_011757245
VERSION     XR_011757245.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1029
                     /gene="LOC139840135"
                     /note="uncharacterized LOC139840135; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840135"
     ncRNA           1..1029
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840135"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139840135"
ORIGIN      
        1 atctggcgtt aaattagggc aaacaactct aaaaccgtca cacacacgtt ctcttttcac
       61 tctcctctcc aattgtcttc gagttcttta tagcaaatga agtcttctca catctaccat
      121 atcttaagtc aggtatgaaa taactgttgt atattctaaa aatttatttc tgtttgattt
      181 gtatgttcct ttcactacgg attaagaaag ccaaataagt tttgtgagaa tcgcgatttc
      241 ggctttccat tatcaagctt tgctgacggt caatcacaga cttccgtgtt aggatgcaac
      301 aaggttggtg atgaaggtgg ttttgctcct aatattcaga aaacaaaaag ggccttgagt
      361 agctcatgac agctattgct aagctggtcc gacttgtggt ggtatttaat ttcaagagta
      421 agtataaatt atgttatagt aaatcaagat tcgggttgag taataaatca agtagcctat
      481 tgtgtccagg caatatccat ttgagcaata ttattgagac gcactatcga aaaaatacct
      541 gagaatgtcg tgacaaagtt catattgttg gatacgatct ttagagagtt aagatgaaaa
      601 tctccaagaa gacttgtgac acccttctcc tcaagataac aagagatgtt cagtttgttg
      661 attcaaatat ccaactttag acaagttatc cgatgattca ataacgtcaa cgattatttg
      721 agacttattc gaacctggcc acccatttga tgaatacatg gatgatgaac aattcgcttg
      781 tatatcacat gcttaaaatg ttaattggtg acactgaaag gctgccgaag gagatggaac
      841 ttgcaaatag gctgcttgga tttggttggg tggaagtggt gctcaacttt ttagtttcag
      901 tttaagatga tgcgcaagaa gttaataaag ttattggaac tgtcgctact ggattgaatc
      961 ttgtgtgcat aaactttgat catttaatgt agatgcattt gtgttttgat tcacattttg
     1021 agacaacta
//
LOCUS       XM_071830364             796 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cysteine proteinase
            inhibitor A-like (LOC139840136), mRNA.
ACCESSION   XM_071830364
VERSION     XM_071830364.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..796
                     /gene="LOC139840136"
                     /note="cysteine proteinase inhibitor A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139840136"
     CDS             119..508
                     /gene="LOC139840136"
                     /codon_start=1
                     /product="cysteine proteinase inhibitor A-like"
                     /protein_id="XP_071686465.1"
                     /db_xref="GeneID:139840136"
                     /translation="MNHKTCLIITALFLFVFFESGLSRLEKTSMMKLGGIRDITQQRG
                     VNDIEIESLARIAVDQHNKKENSFLKFARLLKAKEQVVAGKMYYLTMEAADAAGNLKV
                     YETKIWVKPWMNFKQVQEFKVANDPII"
     misc_feature    order(218..220,356..364,368..370)
                     /gene="LOC139840136"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     misc_feature    245..484
                     /gene="LOC139840136"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; Region: CY; cl09238"
                     /db_xref="CDD:447698"
     polyA_site      796
                     /gene="LOC139840136"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcaaagcaat aagaatcatc tgaaatcatc atatctacca attattaata ttctcaagca
       61 aaattgatac gtacatcaaa aacgaatcca agccaaaacc aaaaccaaaa ccaaaaccat
      121 gaaccataaa acatgtttga tcatcactgc cttattcctg tttgtgtttt ttgaatctgg
      181 gctttcaaga ttggaaaaaa caagcatgat gaaactaggt ggaattcgtg atatcaccca
      241 acaacgaggc gtgaacgata tcgagatcga aagcctcgct cgaatcgctg ttgatcaaca
      301 caataaaaaa gagaactcat ttctgaagtt tgctagattg ttaaaagcga aagagcaggt
      361 ggttgccggt aaaatgtact atctcactat ggaagcagct gatgctgcag ggaatttaaa
      421 agtatatgaa actaaaattt gggtgaagcc atggatgaac tttaagcagg tacaagaatt
      481 caaggttgca aatgatccaa tcatttaaaa gtatcaagtt aaacaagaag gcaacattgt
      541 tcttatatgc tattgtaatc aataaaccgc tagtacgttg tagttgatgc cataagcctt
      601 taaactgcct acttggctac agacgaactt catgacgtat gaatgtcttt ttattggaat
      661 ttatgtaaat acaactatgg tatgaaataa gttgatggct gacttgttag tactatatat
      721 cagattccag tttactgggt gctgacattg atcttaatcc gctcgtgatc aaccaactgt
      781 tgaggttgtt tggcaa
//
LOCUS       XR_011757246             283 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840137), ncRNA.
ACCESSION   XR_011757246
VERSION     XR_011757246.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..283
                     /gene="LOC139840137"
                     /note="uncharacterized LOC139840137; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840137"
     ncRNA           1..283
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840137"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840137"
ORIGIN      
        1 gcgattcttt tatttttgga acaaaacgaa tcgaatcgaa tcagctcttt tgaatcaatc
       61 attttatttt atacattcat atttctgtag ttggaatcaa ctattcaagc gcgtttcttc
      121 atatcaatca agcagattct tggatctgga gaagctcata aggtgattga agtaactgac
      181 gatttcaaag gtttgtggtg ttgctaaatt gttgatccag ataataatga gagaaatact
      241 catctacttg tcgcatcttg atcacatgga cattgagaag cag
//
LOCUS       XR_011757247            1670 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840138), transcript variant X1, ncRNA.
ACCESSION   XR_011757247
VERSION     XR_011757247.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1670
                     /gene="LOC139840138"
                     /note="uncharacterized LOC139840138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840138"
     ncRNA           1..1670
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840138"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840138"
ORIGIN      
        1 acgtcttctc ttactctctt cacataccat cgtgttactc caagattaac ccagaattaa
       61 ctgcctcgcc taatcgatct gagaaacacc acgtaattga aaccaaatta aattaaaaat
      121 taaatcaatc ttccttagac atctctctcc ccactttatc tcttcctgga aaccgaaacc
      181 caccaaaagc ttgattggta aatcaacaat taatctttag gttttaggat acaccactat
      241 taccatttaa ctcggaatca acctacgatc aaaacccgac tgctcttgcc ggaatccgtg
      301 cccagacgcg tcatgtagag tcactgccgg agtattgctt tttcaattgt acgatctttc
      361 ccaccagatt tcggcgattg agcaatcaat gcgaaaggac ctgtcccgtt cgattttcct
      421 ggctttaaat tccgtttctt catggtttgg atttgagttc gtatcaatat ctccgattcg
      481 ttgtaggttt gatggtttca ccgaatttca tgtcaggctg attatttaga atcttattca
      541 ttaactgctt cttcatatca gttgacgagg tttcacggac accgtatcaa ctcccttcaa
      601 cttgtgattg catctctgat gtggttatat gggcatcttt gtttgtgtta aattaagttt
      661 cacgagctta tagaatggtg ttgcgttatt tttatttcgt ggttagcaca ccagcaacca
      721 tttcaagaat caattatata accctagctc cataacttaa attacagtca acacgcttga
      781 gtgaataaac cttctcctgt gagttgattt atgtttttga tccgatttta aaaaggtatg
      841 ttgttagaat atttaattac atattcttaa agtactagac ataatgttta gcattatctt
      901 ctattagcat atctgcatat ttttcttgtc atttgagtct aaaaaagttt catggcaacg
      961 tgcccttgtg gaagaccaca aaaatatctt tgatcattag ttaagaacgt gtgatctgaa
     1021 aattttaaaa atatcttttg aacttaaaaa tatatgtctt gtcaagacaa tggtctttaa
     1081 tcttgaacga attgccttgg gttgtgtttt cgttcaggcg ggtcatatat atagttgaaa
     1141 gggacgcctg ttagaagtca cctacattct attaatttat atgcatactt tcatgttttt
     1201 ttcgagagac tttggttatt aaaataaaat aggaccaatt aaagaatgtg cagatgtctt
     1261 tatcttttaa atcgattaca tatgtcttta tcttttaaat ttgttttttt agaaaggcaa
     1321 gacccaaagt gtagtagtcc atgggtttga tgtctttatg aatttcaaat tccaagtttg
     1381 atgtcttcaa aattttatta ggtaaatatt taagacttgg taacgtttag cacatttttt
     1441 atgaagtata atgtttatct aaaattagtg tcattgatga tcaactaatt tgatggctaa
     1501 ctcatcttcc tttttgatct tcgggtgcta atgttgctaa attaaggaca aatagcagta
     1561 caagcctgta agatggagga ccctattttg aattaggtgg tgcaactcta gaagctagcg
     1621 tggtcaagta tgcatatcat catcatcatc atcatcatca tcatcatcat
//
LOCUS       XR_011757248             965 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840138), transcript variant X2, ncRNA.
ACCESSION   XR_011757248
VERSION     XR_011757248.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..965
                     /gene="LOC139840138"
                     /note="uncharacterized LOC139840138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840138"
     ncRNA           1..965
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840138"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840138"
ORIGIN      
        1 acgtcttctc ttactctctt cacataccat cgtgttactc caagattaac ccagaattaa
       61 ctgcctcgcc taatcgatct gagaaacacc acgtaattga aaccaaatta aattaaaaat
      121 taaatcaatc ttccttagac atctctctcc ccactttatc tcttcctgga aaccgaaacc
      181 caccaaaagc ttgattggta aatcaacaat taatctttag gttttaggat acaccactat
      241 taccatttaa ctcggaatca acctacgatc aaaacccgac tgctcttgcc ggaatccgtg
      301 cccagacgcg tcatgtagag tcactgccgg agtattgctt tttcaattgt acgatctttc
      361 ccaccagatt tcggcgattg agcaatcaat gcgaaaggac ctgtcccgtt cgattttcct
      421 ggctttaaat tccgtttctt catggtttgg atttgagttc gtatcaatat ctccgattcg
      481 ttgtaggttt gatggtttca ccgaatttca tgtcaggctg attatttaga atcttattca
      541 ttaactgctt cttcatatca gttgacgagg tttcacggac accgtatcaa ctcccttcaa
      601 cttgtgattg catctctgat gtggttatat gggcatcttt gtttgtgtta aattaagttt
      661 cacgagctta tagaatggtg ttgcgttatt tttatttcgt ggttagcaca ccagcaacca
      721 tttcaagaat caattatata accctagctc cataacttaa attacagtca acacgcttga
      781 gtgaataaac cttctcctgt gagttgattt atgtttttga tccgatttta aaaaggacaa
      841 atagcagtac aagcctgtaa gatggaggac cctattttga attaggtggt gcaactctag
      901 aagctagcgt ggtcaagtat gcatatcatc atcatcatca tcatcatcat catcatcatc
      961 atcat
//
LOCUS       XM_071830366             757 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nascent
            polypeptide-associated complex subunit alpha-like protein
            (LOC139840139), mRNA.
ACCESSION   XM_071830366
VERSION     XM_071830366.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..757
                     /gene="LOC139840139"
                     /note="nascent polypeptide-associated complex subunit
                     alpha-like protein; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 22 Proteins"
                     /db_xref="GeneID:139840139"
     CDS             7..600
                     /gene="LOC139840139"
                     /codon_start=1
                     /product="nascent polypeptide-associated complex subunit
                     alpha-like protein"
                     /protein_id="XP_071686467.1"
                     /db_xref="GeneID:139840139"
                     /translation="MTAQTQEQLLAAHLEQQKIDHDEPLVEDDDDEDDDEDDDDEIEG
                     HADASGRSKQSRSEKKSRKAVLKLGMKPIPGVSRVTVKKSKNIMFVISKPDVFKSPAS
                     DTYVIFGEAKIEDLSSQLQSQAAEQFKAPNLSNVVSEPEPAATAQDDDEDVDETGVEP
                     KDIELVMTQAGVSRTKAVKALKAADGDIVSAIMELTN"
     misc_feature    211..354
                     /gene="LOC139840139"
                     /note="nascent polypeptide-associated complex (NAC), alpha
                     subunit; Region: NAC_NACA; cd22054"
                     /db_xref="CDD:409233"
     misc_feature    order(223..225,229..261,292..294,313..339,352..354)
                     /gene="LOC139840139"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:409233"
     misc_feature    484..594
                     /gene="LOC139840139"
                     /note="UBA-like domain found in nascent
                     polypeptide-associated complex subunit alpha (NACA) and
                     its homologs mainly found in eukaryotes; Region:
                     UBA_NAC_euk; cd14358"
                     /db_xref="CDD:270541"
     polyA_site      757
                     /gene="LOC139840139"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcaatcatga ctgctcaaac tcaagaacaa ctcctggccg ctcatctcga acaacaaaaa
       61 atcgatcatg atgaaccact ggtagaagat gatgacgatg aagatgatga cgaagatgac
      121 gatgatgaga ttgaaggaca tgcagatgca agcgggaggt ctaagcaaag tagaagtgaa
      181 aagaagagtc gaaaggctgt gttaaagctc gggatgaagc caattcctgg tgttagccgt
      241 gttactgtca agaagagcaa gaatattatg tttgtcattt caaagcctga tgtatttaag
      301 agtcctgctt cagacaccta tgttattttt ggtgaagcta agatagaaga tttaagctca
      361 caattgcaga gccaagcagc agagcagttt aaagcaccta acctaagtaa cgtggtatct
      421 gaacctgagc cagcagctac agctcaggat gatgatgaag acgtagatga gaccggagtg
      481 gagcccaagg acatcgagct ggttatgaca caagcaggtg tatccagaac aaaagcagtc
      541 aaggctctca aggctgctga tggggacatt gtatctgcta ttatggaact cacaaactag
      601 gattcaccac atgaatgagt aaatttccgt tctctcagtt ctgcttatga ggtttaatta
      661 ttgctgtatg tcattagatt atgagtatgc tcaattgtga tctgtattgt gtattgacag
      721 tgtgtttctt attgttgctc tgagagttct gtttcga
//
LOCUS       XM_071830367            1353 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tubulin beta-6 chain-like
            (LOC139840140), mRNA.
ACCESSION   XM_071830367
VERSION     XM_071830367.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1353
                     /gene="LOC139840140"
                     /note="tubulin beta-6 chain-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100
                     Proteins"
                     /db_xref="GeneID:139840140"
     CDS             16..1353
                     /gene="LOC139840140"
                     /codon_start=1
                     /product="tubulin beta-6 chain-like"
                     /protein_id="XP_071686468.1"
                     /db_xref="GeneID:139840140"
                     /translation="MREILHIQGGQCGNQIGSKFWEVVCDEHGIDQTGKYIGTYDVQL
                     ERVNVYYNEASYGRYVPRAVLMDLEPGTMDGVRTGPFGQIFRPDNFVFGQSGAGNNWA
                     KGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP
                     DRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFKTLKLT
                     NPNFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR
                     GSQIYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ
                     NKNSSYFVEWIPNNVKSSVCDIAPKGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRK
                     AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATVDEEGEFDYEEEEEAV"
     misc_feature    16..1308
                     /gene="LOC139840140"
                     /note="tubulin beta chain; Provisional; Region: PLN00220"
                     /db_xref="CDD:215107"
ORIGIN      
        1 aaagttgtta aaaaaatgag agagatcctt catattcaag gtggacaatg tggtaaccaa
       61 attggatcaa agttttggga ggttgtatgt gatgaacatg gaatagatca aacaggaaaa
      121 tatattggga cttatgatgt gcaacttgaa cgtgtgaatg tgtactataa tgaggcttct
      181 tatgggagat atgtaccacg tgctgtgctc atggatctgg agcctggtac gatggacggt
      241 gttcgaaccg gcccgtttgg tcagatcttt cgtcctgata actttgtgtt tggtcagtct
      301 ggtgctggga ataattgggc caaaggacat tatactgaag gcgctgaact tattgatgct
      361 gttcttgatg ttgttaggaa agaggctgaa aactgtgact gcctacaagg ttttcaagta
      421 tgccattctt tgggtggagg gacaggatca gggatgggta ctttactgat ctcgaaaata
      481 agggaggaat atccggaccg aatgatgctc acattctccg tttttccatc accaaaagtt
      541 tccgataccg ttgtcgagcc ttacaacgcc actctctctg ttcatcagct tgttgaaaat
      601 gcagatgaat gcatggtact tgataatgaa gctttatatg atatctgttt caagacactc
      661 aaactcacca atcctaactt tggtgatttg aaccatttga tctctgcaac aatgagtggg
      721 gtgacatgct gcctccgatt tccaggtcaa ctcaactcgg acctccgaaa gctagcagtc
      781 aacctcatcc cgttcccacg tcttcacttc ttcatggtgg gatttgctcc attaacatct
      841 cgtgggtccc aaatataccg tgcactaact gtcccagaac taacccaaca aatgtgggat
      901 gcaaaaaaca tgatgtgtgc agctgaccca cgacacgggc gttacctaac tgcttccgct
      961 atgttcagag gcaaaatgag cactaaagaa gtcgacgagc aaatgattaa tgttcaaaac
     1021 aagaactcgt cgtactttgt ggaatggata ccgaataatg tgaagtcgag cgtgtgtgat
     1081 atcgctccga aagggttgtc aatggcgtca acatttattg gaaactcgac ttcgattcaa
     1141 gaaatgttta ggagggtgag tgagcagttt actgctatgt ttaggaggaa ggcttttttg
     1201 cattggtata caggtgaagg aatggatgaa atggagttta cggaagctga gagtaatatg
     1261 aacgatttgg tgtcggagta tcagcagtat caggatgcaa cggtcgatga ggaaggcgag
     1321 tttgattacg aggaagaaga agaggcagtg tga
//
LOCUS       XM_071830368            1941 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides stomatal closure-related
            actin-binding protein 3-like (LOC139840141), mRNA.
ACCESSION   XM_071830368
VERSION     XM_071830368.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1941
                     /gene="LOC139840141"
                     /note="stomatal closure-related actin-binding protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 19 Proteins"
                     /db_xref="GeneID:139840141"
     CDS             130..1623
                     /gene="LOC139840141"
                     /codon_start=1
                     /product="stomatal closure-related actin-binding protein
                     3-like"
                     /protein_id="XP_071686469.1"
                     /db_xref="GeneID:139840141"
                     /translation="MTRVSPEVVDETQIQAVLSVSADVSFVSNKFPKYKLGPDNQIID
                     EATMHSKGPPLKDVVAQETEQLSDQHKRLSVRDLASKFDKNLSAATKLSNEAKLRDVA
                     SLEGHVLLKKLRDALEYLRGRVAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEV
                     KRLANFLKQASEDGKKLVNQERSFACAEIESAKAVVRRIGEALDEQERVSLNSGKQEM
                     EEMVEEIQQARRIRLLHHPCKVMDMEHELRALRLQIQEKSAFSVKLQQELTLKKWVEE
                     NKLSLYSLEGSGSLGSILRLKPCSEDAMELSKCSIQWYRLSSQCSRRELISGANKSVY
                     ALEPYDVGRILQVDVISIGQKSTVTTTCHVQPAVGLETYVETLSRKSDSEFSVVISQM
                     NGRNYSSHSVHLLRVGKMRMKLSKGWITKARDAYSSTSMQLCGFRGGGNLAAKSLFWQ
                     SRKGQSFVLVFESERERNAAIVLARRYALDCNVVLAGPDDQASLYLL"
     misc_feature    295..417
                     /gene="LOC139840141"
                     /note="Actin-binding domain of plant-specific
                     actin-binding protein; Region: SCAB-ABD; pfam16711"
                     /db_xref="CDD:374744"
     misc_feature    430..933
                     /gene="LOC139840141"
                     /note="Coiled-coil regions of plant-specific actin-binding
                     protein; Region: SCAB_CC; pfam16712"
                     /db_xref="CDD:465244"
     misc_feature    973..1266
                     /gene="LOC139840141"
                     /note="middle domain of the stomatal closure-related actin
                     binding protein1; Region: SCAB1_middle; cl46285"
                     /db_xref="CDD:480625"
     misc_feature    order(997..1005,1072..1074,1099..1116,1120..1122,
                     1126..1128,1132..1146)
                     /gene="LOC139840141"
                     /note="PH domain interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:212565"
     misc_feature    1273..1599
                     /gene="LOC139840141"
                     /note="PH domain of plant-specific actin-binding protein;
                     Region: SCAB-PH; pfam17684"
                     /db_xref="CDD:407577"
ORIGIN      
        1 acaatcactc cttgaaatca ttacgtcagt ttctctctct acaactatca actgaactcg
       61 gtcaaaaaca cacactttta caccttcatt tttctcacac tactcttctc taacatatag
      121 tttaaaagga tgacaagggt aagccctgaa gtggtagatg agacacaaat acaagctgta
      181 ttatcggtat cagcagatgt gagtttcgta tcaaataagt tcccaaaata caaattaggt
      241 cctgataatc agattataga tgaagcaact atgcatagta agggcccacc attgaaagat
      301 gttgtggccc aagaaacaga gcagctatct gatcaacaca aacgtctctc ggttcgtgac
      361 ctggccagta agtttgacaa gaatttgtct gctgcaacta agttgtccaa tgaggccaaa
      421 cttagagatg tggcttcctt agaaggacat gttcttttga agaagctaag agatgctttg
      481 gagtacttaa gagggcgagt agctggtcga aataaagaag atgttgaaaa agcaatctca
      541 atggtggaag cgttggcagt aaagttgact caaaacgaag gggagttgat acaggagaag
      601 tttgaagtga agaggcttgc aaattttctc aaacaggctt cggaagatgg taaaaagttg
      661 gtaaaccaag aaaggtcctt tgcgtgtgca gaaatcgaga gtgcgaaagc agtggtacga
      721 agaatcggcg aggctcttga tgagcaagaa agggtatcac ttaactctgg gaagcaggaa
      781 atggaagaaa tggtggagga aattcagcag gctagaagaa tcagattgtt gcatcacccg
      841 tgcaaggtga tggacatgga acacgagctt cgagccttaa gactacagat ccaagagaag
      901 tcggcgtttt cagtaaagct tcagcaagag cttacactga agaaatgggt ggaggagaac
      961 aagttaagct tatactcatt agaaggttct ggaagtttgg gttcaatttt acgacttaaa
     1021 ccctgctcag aagatgccat ggagctctca aaatgttcaa tccagtggta tcgattatca
     1081 tcacaatgta gtagaaggga acttatttca ggtgcaaaca aatcagttta tgctctggag
     1141 ccatacgatg ttggacggat attgcaagtt gatgttatct caattggcca aaaatctact
     1201 gtcacaacca cttgccatgt acaacctgct gttgggttag agacttacgt ggagacgctt
     1261 tcacggaaaa gcgattctga attcagtgtt gtgatctccc agatgaatgg acggaattac
     1321 tcgtcacatt ctgtccattt gttacgtgtg gggaaaatga gaatgaagct ttcgaaagga
     1381 tggattacca aggccagaga tgcttattcc tctacatcga tgcagctatg tggatttaga
     1441 ggtggcggta atctggcagc taaatcgttg ttttggcaat ccagaaaagg gcaatctttc
     1501 gtattggtat ttgaatcaga acgagaaaga aatgcagcca ttgttctagc ccgaagatac
     1561 gctcttgatt gcaatgtggt gctagctgga ccagatgatc aagcatcact ttatcttctc
     1621 taacttgact aatgcaaata caacaaaggt ttcctaagtg gattcattat ttcatttttc
     1681 acttctaatt ttgagagttt ttttttgggt gtgtttaatt gggttttctt ctactaatat
     1741 gatcatttgt gcatccttta taggcatagt tttggtttgc ctgttcatcg gttgtaacaa
     1801 tttttagtga gtttttcgtt tgcacgtttg tatttctaat atgatgacgc actcgttgat
     1861 caaagcttta gtctttaggg gattgcgttt gtggttgaaa tttgagtttt tgtctcctga
     1921 tctaaattgg ttgatataaa g
//
LOCUS       XM_071830369            1815 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides violaxanthin de-epoxidase,
            chloroplastic-like (LOC139840142), mRNA.
ACCESSION   XM_071830369
VERSION     XM_071830369.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1815
                     /gene="LOC139840142"
                     /note="violaxanthin de-epoxidase, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139840142"
     CDS             173..1603
                     /gene="LOC139840142"
                     /codon_start=1
                     /product="violaxanthin de-epoxidase, chloroplastic-like"
                     /protein_id="XP_071686470.1"
                     /db_xref="GeneID:139840142"
                     /translation="MALSLHSVILCKEETANLYAKSSSDERFKKSRPVPASIIMMKIQ
                     SNHGYYKYFRLFTSYRSNTSYSTLLSHFNKEKSPIHSINTSVEEIEKSDIKKATTLVL
                     QRQWRQFVQLAIVLVCTFVVIPRVDAVDALKTCTCLLKECRIELAKCIANPSCAANVA
                     CLQTCNNRPDETECQIKCGDLFENSVVDQFNECAVSRKKCVPRKSDVGEFPVPDPSAV
                     VQTFNLKDFSGKWFITSGLNPTFDVFDCQLHEFHMESNKLVGDLTWRIKTPDGGFFTR
                     SAVQKFVQDPNQPGVLYNHDNEFLHYQDDWYILSSQIENKPDDYIFVYYRGRNDAWDG
                     YGGAVIYTRSATLPQTIVPQLQKAAQSVGRNFDTFIQTDNSCGPEPPLVERLEKTAEN
                     GENFIIKEAEEIEEEVEKEVVKARDTQMTLFQRLAEGFKELQQDEQNFVRELTKEEKE
                     ILNELQMEATEVEKLFGRALPLRKLR"
     misc_feature    398..1591
                     /gene="LOC139840142"
                     /note="violaxanthin de-epoxidase; Region: PLN02372"
                     /db_xref="CDD:215212"
     polyA_site      1815
                     /gene="LOC139840142"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacatataca tatgcatata catacataaa tatttatata ctttttgaaa gtataagaat
       61 gtttgatact cataaagata tatacaagag gctgatttaa gctctcacta atccattttt
      121 ctgtactgac gttatatcaa gcaggttgca tttggaaccc atcgtactga atatggctct
      181 ttctttgcat tcggttattc tatgcaaaga agaaaccgcc aatttgtatg ccaaatcatc
      241 aagtgatgaa aggtttaaaa agagtagacc agttcctgcg agtataatta tgatgaaaat
      301 tcaatctaac catggatatt ataaatactt ccgattgttt acatcttacc gttcgaacac
      361 tagttattca actctgttgt cacatttcaa taaggagaaa tctccaatac atagcattaa
      421 cacaagtgta gaggaaatag aaaaaagtga tattaaaaag gccacgactt tggttcttca
      481 aagacaatgg agacaattcg tacagttggc tatcgtatta gtttgcacat ttgttgtcat
      541 tcctagagtt gatgctgttg atgctcttaa aacttgtact tgcctactca aggaatgcag
      601 gatcgaactt gcgaaatgta ttgcaaaccc atcttgtgcg gcaaatgttg cttgtctcca
      661 gacttgcaac aatagacccg acgaaactga atgccaaata aaatgtggtg acttgttcga
      721 aaacagtgtt gtggatcagt tcaacgagtg tgcagtttca cgaaagaaat gtgtgccacg
      781 taaatctgac gtgggtgaat tcccggtccc ggatccaagt gcagtggtcc aaaccttcaa
      841 cctgaaggac tttagtggaa aatggttcat aacaagtggg ctaaatccga catttgacgt
      901 atttgattgt cagctgcatg agtttcacat ggaatcgaat aaacttgtag gtgatctgac
      961 gtggcgtata aagactccag atggcggatt ctttactcga tccgcagtgc aaaaatttgt
     1021 gcaagatccg aatcaaccgg gtgttcttta taatcatgac aacgagtttc ttcattacca
     1081 agatgactgg tacatcttgt cttcccaaat agaaaacaaa cccgacgact atatatttgt
     1141 gtattatcgt gggcgaaacg atgcgtggga tggatacggt ggagcggtta tatacacaag
     1201 aagtgcaacg ttaccacaaa ctatcgtccc acaactacaa aaggcggctc aaagtgttgg
     1261 tcgcaacttt gacactttca tccaaacgga taattcttgt gggcccgaac cgccacttgt
     1321 ggagagacta gaaaaaacag ccgaaaatgg tgagaatttt atcataaaag aggccgagga
     1381 aattgaagaa gaggttgaga aagaggtggt caaggctaga gacacgcaaa tgactttgtt
     1441 tcaacggtta gccgaagggt tcaaagagtt gcaacaagat gaacaaaact ttgttaggga
     1501 actcactaaa gaagaaaaag aaatcttgaa tgaacttcaa atggaagcga ccgaagttga
     1561 aaagttgttt gggcgggctt taccacttag gaaactaaga taattttcgg tatctggttg
     1621 agtttaagac atgcattatt atataattca ctcattcatt catcatatgt acataggaaa
     1681 acagcaaaca aaatctgaga agaaatttta tttttagtgt taaagggctg caattgattt
     1741 tttagtaatg tacaactttc attgtatgga aacaagtcac agtaatagta tgatcaaaca
     1801 ttttagttga atata
//
LOCUS       XR_011757249            1064 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840143), ncRNA.
ACCESSION   XR_011757249
VERSION     XR_011757249.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1064
                     /gene="LOC139840143"
                     /note="uncharacterized LOC139840143; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840143"
     ncRNA           1..1064
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840143"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840143"
ORIGIN      
        1 gacctaggag actgcggtaa catttgtgga catttaattg ctatattttg gtatgaagaa
       61 cgtgtcaatc cgtgttcaag agaacgtaat actccgtatt tggtatcatc aatgttttga
      121 gggtggtcgt gtttatcttc cgacatagac aaatcctcct gaatcatata tgcatccagc
      181 aggtgatggt accacaaaac aagcaacaaa tgtcacaacc aaaaaaagtt ttataagtgc
      241 tgggaatgtt ttgagagcta aaattcgaag accaatatca agatggaaag agattattcg
      301 aaagccattg aacaagaaac ccgagcgatc agccatacat aaaagctaca gcgatccaac
      361 ttctccgatt acgaacaaca atggtgattt ggggtccaca aagataataa tcgatgctga
      421 aacagaagtc ataaatatat taaattggcc tgaaaaagcg gtggacgtaa aaccaaatat
      481 tatcgcttct ggtgtaagga gctaaggaac aatgggtcaa cccaattact aaacacagat
      541 cttggcgtta cccaacaagc tacctatcat tttgccacct ttaagttaca cactgtatga
      601 tgcaacatat gctaattctt gaagatatat tttaggtatg taaggatcgt agtaagcaga
      661 tggtggggat atacatttca atatgggtcc ggaaaaggct gagaagacgt attaaacaac
      721 ttagaagttg aaccagttgg tgtcaggctt atgggctaca tggataacat ggtaaataag
      781 ctcggtctca agcttttcaa gatattttat aggtgattcg ttcaagatag cggtggcaat
      841 ttcaacccaa taatttaaaa ttgggttcat atgggttatg tgttatctaa tgaatgaaaa
      901 tggggcaaga gggttttcag atgaatatgg gtcctcaaac catttctttt tttattttta
      961 tttttggaaa attaaagcag cacagtgaga aaattgattt ccatggtgaa agatgcatta
     1021 aatcaactta tgttcatttt ataacattat gatttaaatg acta
//
LOCUS       XR_011757250             271 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840147), ncRNA.
ACCESSION   XR_011757250
VERSION     XR_011757250.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..271
                     /gene="LOC139840147"
                     /note="uncharacterized LOC139840147; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840147"
     ncRNA           1..271
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840147"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840147"
ORIGIN      
        1 ttggatcagt tttggatccc attcacatcc actcatcatc ttcatccatt tttagagaga
       61 gagtaagagt ttagagagag attggaggtt ttggtgagga agaagctcga atcgtgcaaa
      121 gtctcgggtt ttaaagttgt tcctttcgtt ctcggctaca cggtgatagt attggtattt
      181 tccattggcg agttgcggat tacttggaag ctttcttcaa gacttcaaga ttgcatgcgg
      241 atggtggctc gggtaagcgc gaggattaga g
//
LOCUS       XR_011757251             271 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840148), ncRNA.
ACCESSION   XR_011757251
VERSION     XR_011757251.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..271
                     /gene="LOC139840148"
                     /note="uncharacterized LOC139840148; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840148"
     ncRNA           1..271
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840148"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840148"
ORIGIN      
        1 ttggatcagt tttggatccc attcacatcc actcatcatc ttcatccatt tttagagaga
       61 gagtaagagt ttagagagag attggaggtt ttggtgagga agaagctcga atcgtgcaaa
      121 gtctcgggtt ttaaagttgt tcctttcgtt ctcggctaca cggtgatagt attggtattt
      181 tccattggcg agttgcggat tacttggaag ctttcttcaa gacttcaaga ttgcatgcgg
      241 atggtggctc gggtaagcgc gaggattaga g
//
LOCUS       XM_071830371            2409 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA gyrase subunit B,
            chloroplastic/mitochondrial-like (LOC139840149), mRNA.
ACCESSION   XM_071830371
VERSION     XM_071830371.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2409
                     /gene="LOC139840149"
                     /note="DNA gyrase subunit B,
                     chloroplastic/mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840149"
     CDS             69..2252
                     /gene="LOC139840149"
                     /codon_start=1
                     /product="DNA gyrase subunit B,
                     chloroplastic/mitochondrial-like"
                     /protein_id="XP_071686472.1"
                     /db_xref="GeneID:139840149"
                     /translation="MALLKPHHSSLYYRLIMSSRFFIPTSALFASSSPPSTFIKPRAN
                     LGVRGISTNRVLVPSVLVPPRAFMSTSASSPVTDVPKVKDGYGSENIQILEGLDAVRK
                     RPGMYIGSTGFRGLHHLVYEILDNAVDEAQAGFASKVEIVLLADGSVCITDNGRGIPI
                     DLHPGSKKSGVETVLTVLHAGGKFGGASSGYKVSGGLHGVGLSVVNALSEALEVTVWR
                     DNKECHQSYTRGKPHKPLECIDLPSNSGNRTGTRVKFWPDAQIFTSGMEFDYDTIAAR
                     VRERAFLVPGLTITLKKEDMDPEKSRFDEYCFAGGLVEYVKWLNADKQPIHDVLSFRK
                     EADGTTIDVAFQWCSDAYSDTMLGYANSIRTVDGGTHIDGIKASLTRTLNNLGKKSKL
                     IKEKDISLSGEHVREGLTCVISVKLSNPEFEGQTKTRLGNPEVRKMVDQSMQEYLTEY
                     LELNPDVLDLILSKSLNALKAALAAKRARDLERQKSVLKVSSLPGKLADCSATDPEIA
                     EIFIVEGDSAGGSAKQGRDKNFQAILPLKGKILNVERKDEAAMYKNEEIQTLIRALGL
                     GVKGEDFKKDGLRYHKIIILTDADVDGAHIRTLLLTFFYRYQRALFDEGCIYVGVPPL
                     YKVERGKQVRYCYDESELKQLQSTFPSNASYTIQRFKGLGEMMPLQLWETTLDPKTRL
                     LKKLVVEDAAEANVTFSSLMGARVDVRKEMITNTARKMDLKNLDI"
     misc_feature    309..2249
                     /gene="LOC139840149"
                     /note="DNA gyrase subunit B; Validated; Region: gyrB;
                     PRK05644"
                     /db_xref="CDD:235542"
     polyA_site      2409
                     /gene="LOC139840149"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttcttcaa tcaacccaaa agacccaaaa gacctccaca atttaatttg gcaaatgaat
       61 tgaatcgaat ggctcttctt aaaccccatc attcctcctt atactatcgt ttaatcatgt
      121 cttcaagatt ctttattccc actagtgccc tttttgcttc ctcttcacca ccttcaacat
      181 ttataaaacc cagggcaaat ctgggtgtga ggggtatatc tacaaacagg gttttggttc
      241 caagtgtttt agtaccacca agggcattta tgtcaacttc tgcatcaagt cctgttactg
      301 atgttcctaa agtgaaagat ggttatgggt ctgaaaatat tcagatatta gaaggtttgg
      361 atgctgtgag gaaaagacct ggaatgtaca tcgggagtac tggctttcgc ggtctgcatc
      421 atttggttta tgaaatactg gataatgctg ttgatgaagc tcaagcggga tttgcttcaa
      481 aggttgagat tgtgttgctt gcagacggtt cagtttgcat cacagataac ggacgtggga
      541 tcccaatcga cttgcatcca ggctcgaaaa agtcaggagt ggagaccgtg ttaaccgttt
      601 tacatgctgg tggcaaattt ggtggagcca gtagtggtta taaagtatca ggcggactac
      661 atggtgttgg tttgtctgtt gttaacgcat tatccgaggc attagaagtt actgtttgga
      721 gagataacaa agaatgtcat caaagctata ctcgtggaaa acctcataaa ccgttagagt
      781 gtatcgatct tccttctaac tcagggaatc gtacagggac acgcgtaaag ttttggccgg
      841 atgctcaaat atttacatct ggaatggagt ttgattacga tactattgct gcacgagtta
      901 gggaacgagc ttttttagtc cctgggctaa ctattactct caagaaggag gatatggatc
      961 ctgagaagag ccgatttgat gaatattgct ttgctggtgg gctggtcgag tatgtgaagt
     1021 ggttaaatgc tgataagcaa ccaattcatg acgtcttgag ctttagaaaa gaagcagatg
     1081 ggaccactat tgacgtagct ttccaatggt gttcagatgc atattcagat actatgctag
     1141 gatatgctaa cagcatacgt acagttgatg gcgggaccca catagatggc attaaagctt
     1201 cacttacacg aaccctcaat aatcttggaa agaagtcgaa gcttatcaag gaaaaggata
     1261 tcagtttaag cggcgagcat gtgagagagg ggttgacttg tgtaatatcg gtcaaacttt
     1321 caaatcctga gtttgaaggg caaacaaaga cgaggttggg aaatcccgag gtgcggaaaa
     1381 tggttgacca gtcaatgcaa gaatatctta ctgaatactt ggaactaaat ccggatgtgc
     1441 tcgacttaat tctctccaag tcacttaacg ccttgaaggc agctctagca gcaaaacggg
     1501 cacgtgattt ggagagacaa aagagtgttt tgaaagtgtc atctcttcca ggaaagcttg
     1561 ctgattgttc agccactgat cctgaaattg ccgagatatt tatagttgaa ggagattcag
     1621 ccggtggaag tgctaaacaa ggtcgtgata agaactttca ggctattctt cctttaaaag
     1681 gtaaaatatt gaatgttgaa agaaaggatg aagcagcaat gtacaagaac gaagagattc
     1741 aaactttaat tcgtgctctt ggccttggag taaagggaga ggatttcaag aaagatggtt
     1801 tacgatacca taaaattata atcttaactg atgctgatgt tgacggtgct catattcgta
     1861 cgttgttatt aacattcttc tatagatatc agagagcttt atttgatgaa ggctgcatat
     1921 atgttggcgt tccacccctg tacaaggtag aaagggggaa gcaggtgcgt tactgttacg
     1981 acgagtcgga actaaaacag cttcagagta ccttcccttc taatgcatca tatactattc
     2041 agagatttaa agggttggga gaaatgatgc ccttacaatt atgggaaact actttggatc
     2101 ccaaaactag gctgttgaag aaactggtag tggaggatgc agctgaagca aatgttacat
     2161 tttcgtcact tatgggtgca agggtggacg tgcgcaagga gatgataaca aacacagcaa
     2221 gaaagatgga tttgaagaat cttgatatat gaagtaatcg tattgtgata tgaagttaat
     2281 gaactaaatt cttgtggtta gattgtacag taaaaaggcg attaaacgaa agaggttact
     2341 gagaggtgac tacagttcat ttttcagacc tatgattttg tatgttttaa catgcttacc
     2401 ttattgtct
//
LOCUS       XM_071830373             953 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides trihelix transcription
            factor ENAP1-like (LOC139840150), mRNA.
ACCESSION   XM_071830373
VERSION     XM_071830373.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..953
                     /gene="LOC139840150"
                     /note="trihelix transcription factor ENAP1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840150"
     CDS             19..948
                     /gene="LOC139840150"
                     /codon_start=1
                     /product="trihelix transcription factor ENAP1-like"
                     /protein_id="XP_071686474.1"
                     /db_xref="GeneID:139840150"
                     /translation="MAEDLVLTNYQSPATAAGATQPPSSRPIHFRDDCWSEDATSTLV
                     DAWGRRYLELNRGNLRQKDWQEVADAVNARHGHSKKTRRTDVQCKNRIDTLKKKYKVE
                     KARVSESNGQITSTWPFYSRLDPLIGSFATAKKSSSSTPPPPTGVPLPYRKSPSTMLS
                     PQFLTPVALVPQKRPSPVTAAVDESYFRRNYSAVAAAAAAAEEEGSEDDESLGSSDDE
                     GAAGTGEGERKESGGETDSMKRLARAIERFGEIYERVEGEKQKQMIELEKQRMQFTKD
                     LEVQRMQLFMDTQVQLEKIKQARRNVSDDDVYS"
     misc_feature    115..384
                     /gene="LOC139840150"
                     /note="Myb/SANT-like DNA-binding domain; Region:
                     Myb_DNA-bind_4; pfam13837"
                     /db_xref="CDD:463994"
ORIGIN      
        1 attaacaaac cctagaatat ggccgaagac ctagttttaa ccaattatca atctccggcc
       61 accgctgccg gagccacaca acctccgtca tctcgcccga ttcatttccg tgatgattgt
      121 tggagcgaag atgccacgtc gactctcgtc gacgcttggg gccggcggta ccttgaactc
      181 aaccgcggta atctccggca gaaggattgg caggaagtcg ccgacgccgt taacgctcga
      241 cacggccatt caaagaaaac tcgccggacc gatgttcagt gtaagaatcg gattgatact
      301 ttgaagaaaa aatataaggt tgagaaagct agggtttcgg aatctaacgg acagattact
      361 agcacctggc cgttttattc tcgtttagat ccgttgatcg gatccttcgc tacggcgaag
      421 aagtcgtcgt catcgacacc gccgccgcct accggcgttc cgttaccgta ccggaaatca
      481 ccgtcgacga tgctatcacc tcaatttctg acacctgttg ctcttgtccc tcagaaacga
      541 ccttcacccg ttacggccgc cgtagacgaa tcgtatttcc gtaggaatta ctcggcggtt
      601 gcggctgccg cagcggcggc agaagaagaa ggttctgagg atgatgagtc gttggggagc
      661 agcgacgatg aaggtgcggc gggcacaggg gaaggagaga ggaaggaaag tggaggcgaa
      721 acggattcga tgaaacggtt ggctagggct attgaaaggt tcggtgagat ttacgagcga
      781 gttgaaggtg agaaacagaa acagatgatt gaattggaga aacaaaggat gcaatttact
      841 aaagatttgg aagtgcaaag gatgcagttg tttatggata cacaggttca gttggagaag
      901 attaagcaag ctaggaggaa tgtttctgat gatgatgttt acagttgatc ttt
//
LOCUS       XM_071830374            2318 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides acyl-CoA-binding
            domain-containing protein 5 (LOC139840151), transcript variant X1,
            mRNA.
ACCESSION   XM_071830374
VERSION     XM_071830374.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2318
                     /gene="LOC139840151"
                     /note="acyl-CoA-binding domain-containing protein 5;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139840151"
     CDS             170..2161
                     /gene="LOC139840151"
                     /codon_start=1
                     /product="acyl-CoA-binding domain-containing protein 5"
                     /protein_id="XP_071686475.1"
                     /db_xref="GeneID:139840151"
                     /translation="MFPFSRKGKKLGRVKVQLSDTAGTRSPVRHPKRTINSHGDSVTT
                     INESGDNNRSSSTAPEQENSTSGNSEGWKKLSTFGDKPTPRFNHAAAVVGKKMIVVGG
                     ESGEGLLDDVQVLNFENYTWTAASSRLYVSPSSLQLKIPSCKGHCLVPWGNKLLLIGG
                     RTDPPSDRVAVWAFDTETEGWSLMEAKGDIPVARSGHSVVRAGSNLILFGGEDIKRKK
                     LNDLHMFDLKSLTWLPLRSTGPGPSARCNHVAALYDDKLLLVFGGTAKSKSLNDLYSF
                     DFETIKWSRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRKKRHAEILSYDILKQEWS
                     VVQTSSQQSITTNKGFSLVLLQRKEMEYLVAFGGIKKEPSDQVEVLMMEKNESSMSRR
                     MTILSEKRYASTGPAVGPVSSLGRQNLASAIEHHGSGRKSLSESLLGDSKHGNVSLRK
                     EHVDDDMAFKLSRNSEDDRASLPTEHTCSMAEPEKDDRERMEDAIGFQETDGKSGFFP
                     GSSSIYQLYEIKMAALIRKNGILEGQLAAALAGREAAEKNLSSVVKSRQEVEKRLADT
                     LKDMELMKEKLVLVEMAQEEANSLSNIVHSDHVRLEHDVAFLKAVLDDTQKELHSTRG
                     VLSGERARAFQLQVEVFHLKQRLQSMENRTPTPRKPFHG"
     misc_feature    395..1177
                     /gene="LOC139840151"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; Region: NanM; COG3055"
                     /db_xref="CDD:442289"
     misc_feature    422..583
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    593..742
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    749..892
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    902..1048
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    1055..1177
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     polyA_site      2318
                     /gene="LOC139840151"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttttactc taatcccaca cccacatatt atctccttaa aacaacccaa aaattgcatc
       61 aataatttca gcatttttat tttcaagctc ttgccttttc aaaatagctt agctcaattt
      121 ccctgtttgt aatttatact gtggagcttg ataatttgat tgagcaacca tgtttccttt
      181 ttcaagaaaa ggaaagaagc ttggaagagt taaggttcag ctttctgaca cagcgggcac
      241 acgcagtcct gttcgacacc ccaaacgcac aattaattcc catggtgata gtgttacaac
      301 tatcaatgag tccggtgata ataaccgctc ttcatccact gcacctgaac aagaaaattc
      361 tacttcagga aatagcgaag gatggaaaaa gctttcaact tttggggata agcctacacc
      421 tcggttcaat catgcagcag ctgtagttgg aaagaaaatg attgttgttg gtggtgaatc
      481 tggagaaggg ttattagatg acgtacaggt tttgaatttt gaaaattata catggaccgc
      541 agcttcatca agactatacg tttcaccatc tagtcttcaa ctaaagattc catcttgcaa
      601 gggtcactgt ttggtgcctt ggggaaacaa gttactttta atcggaggac gaacggaccc
      661 accaagtgat cgagtagcag tgtgggcatt tgatacagaa acagagggat ggtcacttat
      721 ggaagcaaaa ggagatatcc cagttgcacg aagcggccac tctgtagtgc gagcaggctc
      781 taatttaatt ctatttggag gcgaagatat caagagaaaa aaattgaatg atctacatat
      841 gtttgatctt aagtcactca catggcttcc tcttcgttcc acgggaccgg gaccatctgc
      901 cagatgcaat catgtggccg ctctttatga tgacaaattg cttctcgtat tcggaggaac
      961 tgcaaagtca aaatctttga atgatttgta ctcgtttgac tttgaaacga taaagtggtc
     1021 tagaattaag atacgcggtt tccatccatc acctagagct ggttgttgtg gagttttgtg
     1081 tggaacaaaa tggtatattg caggaggtgg tagcagaaaa aaacggcatg cagagatatt
     1141 atcgtacgat atactaaaac aggagtggtc tgttgttcaa acatcatctc aacaatctat
     1201 tactaccaac aagggcttta gcctggtgct tttacaaaga aaggaaatgg aatatttggt
     1261 tgcgtttgga ggtattaaaa aggagccgtc cgaccaggtt gaggtactta tgatggaaaa
     1321 aaatgaatca tccatgagtc gaagaatgac tatactatct gaaaaacgat atgcgtctac
     1381 cggaccagca gttggtccgg tgagtagcct cggcagacaa aatctagctt ctgcaatcga
     1441 acatcatggc tcgggcagga agtctttgtc tgaatctttg ctcggggatt caaaacatgg
     1501 taatgtttcg ttacggaaag aacacgttga tgatgatatg gcctttaaac tttcaagaaa
     1561 ttcggaagat gatcgagcct cactgcctac tgagcatact tgttccatgg ccgaacccga
     1621 aaaagacgat agagaaagaa tggaggatgc gattggattt caagaaactg atggaaagtc
     1681 gggttttttt ccgggttctt caagcatata ccagttgtat gaaataaaga tggctgcttt
     1741 aatcagaaag aacgggattc ttgaaggtca attagcagct gcattagcgg gtcgtgaagc
     1801 agctgaaaag aatctttctt ctgttgttaa aagccgtcaa gaggttgaaa agagactagc
     1861 tgatactttg aaggatatgg aacttatgaa agagaagctg gttttggtag aaatggcaca
     1921 ggaagaggca aatagcttgt caaatattgt acattctgat catgtgcgac tcgagcatga
     1981 cgtggcgttt ttaaaagccg ttttagatga tacacagaag gaattacatt caaccagagg
     2041 ggtattatcg ggagaaagag caagagcgtt tcagctacag gttgaagttt ttcatctcaa
     2101 gcaaagactg cagtcgatgg agaatcgaac accaacgcct agaaaaccat tccatggctg
     2161 acttgacttt caaaacaaac tgatgaatta gtagaataat gattatgatg tccattatgt
     2221 atattccact tatttttgct cctgaaatga aatttaagga atctgtttag tattaacatt
     2281 tcaggatttc tgtttatata tgttatcttt agacttta
//
LOCUS       XM_071830375            2233 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides acyl-CoA-binding
            domain-containing protein 5 (LOC139840151), transcript variant X2,
            mRNA.
ACCESSION   XM_071830375
VERSION     XM_071830375.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2233
                     /gene="LOC139840151"
                     /note="acyl-CoA-binding domain-containing protein 5;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139840151"
     CDS             85..2076
                     /gene="LOC139840151"
                     /codon_start=1
                     /product="acyl-CoA-binding domain-containing protein 5"
                     /protein_id="XP_071686476.1"
                     /db_xref="GeneID:139840151"
                     /translation="MFPFSRKGKKLGRVKVQLSDTAGTRSPVRHPKRTINSHGDSVTT
                     INESGDNNRSSSTAPEQENSTSGNSEGWKKLSTFGDKPTPRFNHAAAVVGKKMIVVGG
                     ESGEGLLDDVQVLNFENYTWTAASSRLYVSPSSLQLKIPSCKGHCLVPWGNKLLLIGG
                     RTDPPSDRVAVWAFDTETEGWSLMEAKGDIPVARSGHSVVRAGSNLILFGGEDIKRKK
                     LNDLHMFDLKSLTWLPLRSTGPGPSARCNHVAALYDDKLLLVFGGTAKSKSLNDLYSF
                     DFETIKWSRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRKKRHAEILSYDILKQEWS
                     VVQTSSQQSITTNKGFSLVLLQRKEMEYLVAFGGIKKEPSDQVEVLMMEKNESSMSRR
                     MTILSEKRYASTGPAVGPVSSLGRQNLASAIEHHGSGRKSLSESLLGDSKHGNVSLRK
                     EHVDDDMAFKLSRNSEDDRASLPTEHTCSMAEPEKDDRERMEDAIGFQETDGKSGFFP
                     GSSSIYQLYEIKMAALIRKNGILEGQLAAALAGREAAEKNLSSVVKSRQEVEKRLADT
                     LKDMELMKEKLVLVEMAQEEANSLSNIVHSDHVRLEHDVAFLKAVLDDTQKELHSTRG
                     VLSGERARAFQLQVEVFHLKQRLQSMENRTPTPRKPFHG"
     misc_feature    310..1092
                     /gene="LOC139840151"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; Region: NanM; COG3055"
                     /db_xref="CDD:442289"
     misc_feature    337..498
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    508..657
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    664..807
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    817..963
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    970..1092
                     /gene="LOC139840151"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     polyA_site      2233
                     /gene="LOC139840151"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tccatccata catcttcttc actgcaataa atgctacagg tttgtaattt atactgtgga
       61 gcttgataat ttgattgagc aaccatgttt cctttttcaa gaaaaggaaa gaagcttgga
      121 agagttaagg ttcagctttc tgacacagcg ggcacacgca gtcctgttcg acaccccaaa
      181 cgcacaatta attcccatgg tgatagtgtt acaactatca atgagtccgg tgataataac
      241 cgctcttcat ccactgcacc tgaacaagaa aattctactt caggaaatag cgaaggatgg
      301 aaaaagcttt caacttttgg ggataagcct acacctcggt tcaatcatgc agcagctgta
      361 gttggaaaga aaatgattgt tgttggtggt gaatctggag aagggttatt agatgacgta
      421 caggttttga attttgaaaa ttatacatgg accgcagctt catcaagact atacgtttca
      481 ccatctagtc ttcaactaaa gattccatct tgcaagggtc actgtttggt gccttgggga
      541 aacaagttac ttttaatcgg aggacgaacg gacccaccaa gtgatcgagt agcagtgtgg
      601 gcatttgata cagaaacaga gggatggtca cttatggaag caaaaggaga tatcccagtt
      661 gcacgaagcg gccactctgt agtgcgagca ggctctaatt taattctatt tggaggcgaa
      721 gatatcaaga gaaaaaaatt gaatgatcta catatgtttg atcttaagtc actcacatgg
      781 cttcctcttc gttccacggg accgggacca tctgccagat gcaatcatgt ggccgctctt
      841 tatgatgaca aattgcttct cgtattcgga ggaactgcaa agtcaaaatc tttgaatgat
      901 ttgtactcgt ttgactttga aacgataaag tggtctagaa ttaagatacg cggtttccat
      961 ccatcaccta gagctggttg ttgtggagtt ttgtgtggaa caaaatggta tattgcagga
     1021 ggtggtagca gaaaaaaacg gcatgcagag atattatcgt acgatatact aaaacaggag
     1081 tggtctgttg ttcaaacatc atctcaacaa tctattacta ccaacaaggg ctttagcctg
     1141 gtgcttttac aaagaaagga aatggaatat ttggttgcgt ttggaggtat taaaaaggag
     1201 ccgtccgacc aggttgaggt acttatgatg gaaaaaaatg aatcatccat gagtcgaaga
     1261 atgactatac tatctgaaaa acgatatgcg tctaccggac cagcagttgg tccggtgagt
     1321 agcctcggca gacaaaatct agcttctgca atcgaacatc atggctcggg caggaagtct
     1381 ttgtctgaat ctttgctcgg ggattcaaaa catggtaatg tttcgttacg gaaagaacac
     1441 gttgatgatg atatggcctt taaactttca agaaattcgg aagatgatcg agcctcactg
     1501 cctactgagc atacttgttc catggccgaa cccgaaaaag acgatagaga aagaatggag
     1561 gatgcgattg gatttcaaga aactgatgga aagtcgggtt tttttccggg ttcttcaagc
     1621 atataccagt tgtatgaaat aaagatggct gctttaatca gaaagaacgg gattcttgaa
     1681 ggtcaattag cagctgcatt agcgggtcgt gaagcagctg aaaagaatct ttcttctgtt
     1741 gttaaaagcc gtcaagaggt tgaaaagaga ctagctgata ctttgaagga tatggaactt
     1801 atgaaagaga agctggtttt ggtagaaatg gcacaggaag aggcaaatag cttgtcaaat
     1861 attgtacatt ctgatcatgt gcgactcgag catgacgtgg cgtttttaaa agccgtttta
     1921 gatgatacac agaaggaatt acattcaacc agaggggtat tatcgggaga aagagcaaga
     1981 gcgtttcagc tacaggttga agtttttcat ctcaagcaaa gactgcagtc gatggagaat
     2041 cgaacaccaa cgcctagaaa accattccat ggctgacttg actttcaaaa caaactgatg
     2101 aattagtaga ataatgatta tgatgtccat tatgtatatt ccacttattt ttgctcctga
     2161 aatgaaattt aaggaatctg tttagtatta acatttcagg atttctgttt atatatgtta
     2221 tctttagact tta
//
LOCUS       XM_071830376            1498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein-tyrosine-phosphatase
            PTP1-like (LOC139840152), mRNA.
ACCESSION   XM_071830376
VERSION     XM_071830376.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1498
                     /gene="LOC139840152"
                     /note="protein-tyrosine-phosphatase PTP1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840152"
     CDS             219..1187
                     /gene="LOC139840152"
                     /codon_start=1
                     /product="protein-tyrosine-phosphatase PTP1-like"
                     /protein_id="XP_071686477.1"
                     /db_xref="GeneID:139840152"
                     /translation="MSTGFPPKLALESDQIRYCVQALKFFTVKLTDQYSIIQQEFSSL
                     QDLRMMSSEVNNNCSVARLHVNRRKNRYSNVVPFDANRVVIDPCKDNRLSATGYINAS
                     FITAEANPSESVSRFIATQGPLPETVEDFWEMVLQNHCPAVLMLTKLVDRNRIQKCGD
                     YFQSDNGPRLFGNISIVTRSITTTDSSLVLRHMEVHRKESEGPPLPVLHIQYPEWPDH
                     GVPYDTLAVREIFRRLCHLPSSKGPIVVHCSAGIGRTGTYCAIHNTIQRILIGDMTAL
                     DLVKTISTFRAQRMGMVQTLDQYIFCYEAIINELEDLVSGSDIQES"
     misc_feature    510..1130
                     /gene="LOC139840152"
                     /note="protein tyrosine phosphatase 1 from Arabidopsis
                     thaliana and similar plant PTPs; Region: PTPc_plant_PTP1;
                     cd17658"
                     /db_xref="CDD:350496"
ORIGIN      
        1 aaaccactag tggtgggcat tgggcaaccc tcacaacaac cattttttac gattactaca
       61 atcaataata atcagctcac cgggactcca ccacgggcaa cggcaaatcg tcacgcagtc
      121 ggagcagtaa atcggtgata gcttctttca ccggttctaa acttctaaaa tcttcatcat
      181 catcttcttc ttcttctatt tccatcaatt tgttcaatat gtctactgga tttccaccaa
      241 aattggctct tgaatccgat caaattcgtt attgcgttca agctctcaag ttttttacag
      301 tgaaactgac tgatcagtat tcaattattc aacaagagtt ctcaagtttg caggatctta
      361 ggatgatgtc atcagaagtt aataataact gctcggtggc tagactacat gttaatcgta
      421 gaaaaaaccg ttactcgaat gttgtaccat ttgatgcaaa cagagttgtt attgatccat
      481 gcaaagataa caggctatca gcaacgggat acatcaatgc tagctttata acagcagagg
      541 ctaatccatc tgaaagtgtt tctcggttca tagccactca aggccccctt cctgaaactg
      601 ttgaagattt ctgggaaatg gtgctccaaa atcattgtcc agcagtgttg atgcttacta
      661 agctagttga ccgcaaccgg atccaaaagt gtggagacta ttttcaatca gacaacggcc
      721 caagattgtt tggcaatata tctattgtta ccagaagcat aacaacaact gacagctcat
      781 tagtgttgcg gcacatggaa gtgcatcgta aagagtcaga gggtcctcct ctacctgttt
      841 tacatattca atatcccgaa tggcctgatc atggagtacc atacgacact ttggctgttc
      901 gagagatttt tagaagatta tgccatctgc cgtcatctaa agggccgatt gtggtgcatt
      961 gcagtgcagg catcggtaga accggaacgt attgtgcgat tcataacaca atccaaagaa
     1021 ttttaattgg tgatatgact gccttagatc ttgtcaaaac catcagcact ttcagggcgc
     1081 aacgaatggg gatggtccaa accttggatc aatatatctt ctgctatgaa gctattatta
     1141 acgaacttga ggaccttgtc tctggttccg acattcaaga gagctaaaaa tgattaatga
     1201 tggcttgatc taatctagct tatgctcgtg aagaacctaa ttttcaccaa ttcagagtta
     1261 actgcaaaat cggatagcat atgattgttt aggtgtaagg caatatgcat tcttcgccct
     1321 ccattgaaat tgcatcattc tttgccatag agtagaattg gtgttaaata ggtgtgatta
     1381 gtaatagtac aaattctatt gtgattttgc taattgtttt ctgctggtaa actgagtttc
     1441 tacatcacca tgtacgcttt ttactttttc cttcggcgaa gatgattgaa ttacaagt
//
LOCUS       XM_071830377            1784 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 (LOC139840153),
            mRNA.
ACCESSION   XM_071830377
VERSION     XM_071830377.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1784
                     /gene="LOC139840153"
                     /note="probable (S)-N-methylcoclaurine 3'-hydroxylase
                     isozyme 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840153"
     CDS             40..1563
                     /gene="LOC139840153"
                     /codon_start=1
                     /product="probable (S)-N-methylcoclaurine 3'-hydroxylase
                     isozyme 2"
                     /protein_id="XP_071686478.1"
                     /db_xref="GeneID:139840153"
                     /translation="MDLKAFLTESFSSPLFIISTFIFLLFIIKQTKNLFVNKIQNLPP
                     GPPKFPIIGNLLQVGDKVHESLAKFAEEYGPLISLQLGSQILVVASSPEAAMGILKTQ
                     DRFLSSRSVPTALDHKSLLSHSIFWSVCNETWRMLRTLCRTEFFSPQALETHSSLRIE
                     KMDKMLSFLNSKQGEVINTQDIVFTTLFNTLSCIIFGKDLLDIEKENGTCTGLKASIF
                     MILEYGARVKDFGSFFPIFNELDLQGIRKGGRKHIQEVFDYWKDIIDDRRRAHFKPTT
                     LLSEQKTTFLDRLIDVGFTNDQINEYITELFVAGSNTTTTAVVWAMTELVKNKEVMIK
                     IEEEMKREIETDKISESQLYKLPYLKACVKESFRLHAPVPFLLPRLANQTCEVMNYTI
                     PKYARVFVNVWAMGRDPKVWDEPLCFKPERFIDSKTDFKGHNYELLPFGSGRRMCPGL
                     PLGSLDLEFILASLIHEFDWVLPNNEDPMKIDMNDKFLLTLRKEKHLELIFKRKRGS"
     misc_feature    247..1539
                     /gene="LOC139840153"
                     /note="cytochrome P450 (CYP) superfamily; Region:
                     cytochrome_P450; cl41757"
                     /db_xref="CDD:477761"
     misc_feature    order(439..441,451..453,472..474,610..612,952..957,
                     964..969,976..981,988..990,1138..1140,1168..1170,
                     1174..1176,1243..1245,1354..1362,1372..1386,1393..1398)
                     /gene="LOC139840153"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410696"
     misc_feature    order(697..702,952..954,961..966,976..978,1162..1173)
                     /gene="LOC139840153"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:410696"
     polyA_site      1784
                     /gene="LOC139840153"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agcgatctga ttcaacacac aaataaactt caactaaaca tggatcttaa agcttttcta
       61 acagagagct tttcatcccc tctattcatt atatcaacat tcatatttct tctctttatc
      121 atcaaacaaa ccaaaaatct atttgtaaat aaaatacaaa atctcccacc tggtcctccg
      181 aagtttccga tcatcggaaa cttactccag gtgggcgata aagttcacga atccttagcg
      241 aaatttgctg aagaatatgg tcctctcata tctcttcaat taggttcaca aatcctcgtt
      301 gtcgcttcgt ctcctgaagc agcaatgggc atcctcaaga ctcaagaccg tttcctttca
      361 tcgcgttcag tgccaaccgc acttgatcat aaatcgttac tatctcattc aatcttttgg
      421 tcagtgtgca atgaaacttg gagaatgtta agaacccttt gtcgaaccga atttttttca
      481 cctcaagccc ttgagaccca ctctagttta cgaatcgaaa agatggacaa aatgttgagt
      541 ttcttgaata gtaaacaagg agaagtaatt aacactcaag atatagtttt tactacattg
      601 ttcaatacgt tgagttgcat tatttttggg aaagacttgc ttgatataga aaaagaaaat
      661 ggtacttgta cagggttaaa agcatccata tttatgatac tcgagtatgg agctcgtgta
      721 aaggatttcg gttcattttt tccgattttt aacgaattgg atcttcaggg aataagaaaa
      781 ggaggcagga aacatataca agaggtgttt gattattgga aagacataat agatgataga
      841 agaagagctc atttcaagcc tacaactttg ttatcagaac aaaaaacaac tttcttggat
      901 cgtttgattg atgttggatt tactaatgac cagatcaatg aatatattac tgaattattc
      961 gtagcaggat caaataccac caccactgca gtggtatggg ctatgaccga actagtaaaa
     1021 aacaaagagg tcatgataaa aatagaagaa gagatgaaaa gagaaatcga aactgataaa
     1081 atcagtgaat ctcaactata taaactacct tatcttaaag catgtgttaa agaaagtttt
     1141 agattacacg cacccgtccc ttttcttctt ccccgtctag cgaaccaaac ttgtgaggtg
     1201 atgaattata caatccctaa atacgcgagg gtgtttgtca acgtttgggc aatgggacga
     1261 gaccccaaag tttgggacga acctttatgt ttcaaaccag aaagatttat tgattcaaag
     1321 acggacttta aaggccataa ttacgagtta ttaccatttg gttcaggaag aaggatgtgt
     1381 cctggtttac cgttaggtag tttggatttg gaatttatat tagcatcttt aattcatgaa
     1441 tttgattggg ttctaccaaa caatgaggat cctatgaaaa ttgatatgaa tgacaaattt
     1501 ctactcactt tgaggaagga aaaacatcta gaactcatct tcaaacgtaa acgtggttct
     1561 taatcagttt agtttagtga gcgtgttctt acatttattt ttttccctat atatattttt
     1621 tgtaccttgc atttcgataa tgcaattgct gatttcagtc ttaaatgttg taattcttct
     1681 ttcacttttt gttatttatt tgtacttaac ttatgttcat tgatgtatga atatgagtta
     1741 ggtgatttat gtattcactt tttaattaac cggataaagt ttta
//
LOCUS       XM_071830378            1225 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-isopropylmalate
            dehydratase small subunit 1-like (LOC139840154), transcript variant
            X1, mRNA.
ACCESSION   XM_071830378
VERSION     XM_071830378.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1225
                     /gene="LOC139840154"
                     /note="3-isopropylmalate dehydratase small subunit 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139840154"
     CDS             21..797
                     /gene="LOC139840154"
                     /codon_start=1
                     /product="3-isopropylmalate dehydratase small subunit
                     1-like"
                     /protein_id="XP_071686479.1"
                     /db_xref="GeneID:139840154"
                     /translation="MAAAASVTNTTTFSTSVSQRRHQRRSSASISTLNAFNSTSKRSL
                     KTLISHSAVPSNATVRRHTSIISAATSDLPSSGPATSFHGTCYVVRDNIDTDQIIPAE
                     YLTLVPSKPEEYKKLGSYALIGLPTSYETRFVEPGEYQSKYSIIIAGDNFGCGSSREH
                     APVALGAAGVTAVVAESYARIFFRNSVATGEIYPLESEVRVCDECNTGDVVTIELDQS
                     LLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKAGMIPA"
     misc_feature    21..794
                     /gene="LOC139840154"
                     /note="3-isopropylmalate isomerase/dehydratase small
                     subunit; Provisional; Region: PLN00072"
                     /db_xref="CDD:177701"
     polyA_site      1225
                     /gene="LOC139840154"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caccaccacc acaaccaaca atggcggccg ctgcttctgt tacaaatacc accacatttt
       61 ctacctctgt tagccagcgt cgtcaccaac ggcgatcatc cgcttctatt tccactctca
      121 acgccttcaa ttccacatca aaacgctcat tgaaaactct aatttctcac tcggccgttc
      181 cttccaatgc aaccgtacgt cgccatacat ccatcatctc cgcagcaact tccgatttac
      241 cgtcgtctgg tcccgccaca tcatttcacg gcacgtgcta cgtcgtccgg gacaatatcg
      301 acactgatca aatcattcca gctgaatacc taaccctagt tccatcaaaa cctgaagagt
      361 acaaaaaatt aggatcctac gctctaatcg gacttccgac gtcttacgaa actcgattcg
      421 ttgaacctgg agagtatcag tccaaatact ctatcatcat tgctggagat aacttcggtt
      481 gtggttcatc tcgtgagcac gcgccggtag cgttaggagc ggcaggagtg acggcggtgg
      541 tggcggagtc gtatgccagg atatttttcc ggaattcggt tgcgactgga gagatttatc
      601 cattagaatc agaagttagg gtatgtgatg agtgtaatac tggtgatgtg gtgacaattg
      661 agcttgatca aagtctattg attaatcata caactggaaa agagtataag ttgaagccaa
      721 ttggtgatgc tggccctgtg attgaagctg gtggtatatt cgcttatgct cgaaaagctg
      781 gaatgattcc tgcttaaact caaggtcatt gtatcatata tgttctccag caggcttggt
      841 tctgttgaaa agatctattt ggaagctaca tacatacctt ggcatgtagg agaggtattg
      901 agtgctccgg gtacactatg atgtcttttt agtggctttg gtatttaact tacagttaaa
      961 agaatgccta tgtaatttca cgatttgtta tgtcataata atctgatgaa tgttttatca
     1021 ataagttgtt ttgtccaaat aatttgttga aaattttctt tcctttttct tacgaatttt
     1081 tttttttaat gtcgacgtgt tttgttacac aagagattag gagtgtttgc ttgacataag
     1141 gattcttcag tgattctcta ggctagtaaa ctgtctggtt taatgtgtaa taaatggatt
     1201 gtataaagac gataagttgg gtgca
//
LOCUS       XR_011757252            1320 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-isopropylmalate
            dehydratase small subunit 1-like (LOC139840154), transcript variant
            X2, misc_RNA.
ACCESSION   XR_011757252
VERSION     XR_011757252.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1320
                     /gene="LOC139840154"
                     /note="3-isopropylmalate dehydratase small subunit 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139840154"
     misc_RNA        1..1320
                     /gene="LOC139840154"
                     /product="3-isopropylmalate dehydratase small subunit
                     1-like, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840154"
ORIGIN      
        1 caccaccacc acaaccaaca atggcggccg ctgcttctgt tacaaatacc accacatttt
       61 ctacctctgt tagccagcgt cgtcaccaac ggcgatcatc cgcttctatt tccactctca
      121 acgccttcaa ttccacatca aaacgctcat tgaaaactct aatttctcac tcggccgttc
      181 cttccaatgc aaccgtacgt cgccatacat ccatcatctc cgcagcaact tccgatttac
      241 cgtcgtctgg tcccgccaca tcatttcacg gcacgtgcta cgtcgtccgg gacaatatcg
      301 acactgatca aatcattcca gctgaatacc taaccctagt tccatcaaaa cctgaagagt
      361 acaaaaaatt aggatcctac gctctaatcg gacttccgac gtcttacgaa actcgattcg
      421 ttgaacctgg agagtatcag tccaaatact ctatcatcat tgctggagat aacttcggtt
      481 gtggttcatc tcgtgagcac gcgccggtag cgttaggagc ggcaggagtg acggcggtgg
      541 tggcggagtc gtatgccagg atatttttcc ggaattcggt tgcgactgga gagatttatc
      601 cattagaatc agaagttagg gtatgtgatg agtgtaatac tggtgatgtg gtgacaattg
      661 agcttgatca aagtctattg attaatcata caactggaaa agagtataag ttgaagccaa
      721 ttggtgatgc tggccctgtg attgaagctg gtggtatatt cgcttatgct cgaaaagctg
      781 gaatgattcc tgcttaaact caagaaatgc cagtaggttg attttgctta taagtttgac
      841 attgaatctg aagatcaata aactcctttt ctacttcaac tcatcttgaa catctacggg
      901 tcattgtatc atatatgttc tccagcaggc ttggttctgt tgaaaagatc tatttggaag
      961 ctacatacat accttggcat gtaggagagg tattgagtgc tccgggtaca ctatgatgtc
     1021 tttttagtgg ctttggtatt taacttacag ttaaaagaat gcctatgtaa tttcacgatt
     1081 tgttatgtca taataatctg atgaatgttt tatcaataag ttgttttgtc caaataattt
     1141 gttgaaaatt ttctttcctt tttcttacga attttttttt ttaatgtcga cgtgttttgt
     1201 tacacaagag attaggagtg tttgcttgac ataaggattc ttcagtgatt ctctaggcta
     1261 gtaaactgtc tggtttaatg tgtaataaat ggattgtata aagacgataa gttgggtgca
//
LOCUS       XM_071830379            1286 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chloroplast stem-loop
            binding protein of 41 kDa b, chloroplastic-like (LOC139840155),
            mRNA.
ACCESSION   XM_071830379
VERSION     XM_071830379.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1286
                     /gene="LOC139840155"
                     /note="chloroplast stem-loop binding protein of 41 kDa b,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139840155"
     CDS             86..1234
                     /gene="LOC139840155"
                     /codon_start=1
                     /product="chloroplast stem-loop binding protein of 41 kDa
                     b, chloroplastic-like"
                     /protein_id="XP_071686480.1"
                     /db_xref="GeneID:139840155"
                     /translation="MAGSLATVQHNFKLQNSVSLLPSSQSTFCGTKFITSIQYKRKVC
                     QPKGSLNVVASSAKKILVMGGTRFIGIFLSRLLVEEGHQITLFTRGKAPITQILPGES
                     EDAYNSFKSKILHLKGDRKDYDFVQTSLAAEGFDVVYDINGREAEEVEPILDALPNLE
                     QYIYCSSAGVYLKSDLLPHCETDAVDPKSRHKGKLETEALLESKGVNYTSIRPVYIYG
                     PLNYNPVEEWFFHRLKAGRPIPIPNSGLQVTQLGHVKDLATAFIKVLGNEKAAKQVYN
                     ISGDRYVTFDGLARACAKAGGFPEPEIIHYNPKEFDFGKKKAFPFRDQHFFASVEKAK
                     AELGIIPEYGLVEGLTDSYNLDFGRGTFRKEADFSTDDIILGKSLVLS"
     misc_feature    125..1231
                     /gene="LOC139840155"
                     /note="RNA-binding protein; Provisional; Region: PLN00016"
                     /db_xref="CDD:215029"
     polyA_site      1286
                     /gene="LOC139840155"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcatcacaat atatggtttt tacaccatca tcatcttctt cattaatcac accctcatct
       61 catattcatc ttcacaggct tctcaatggc aggtagcctt gcaactgtgc agcataattt
      121 caagttgcaa aactctgttt cacttctacc atcttctcaa tccacttttt gtggcaccaa
      181 attcatcacc tccattcagt acaagagaaa agtatgtcaa ccaaaaggat ctttgaatgt
      241 ggtggcatca agtgccaaga aaattctagt aatgggaggc acacgcttca tcggaatctt
      301 tctttcaaga ctacttgttg aagagggcca tcagattact ctgttcacta gaggaaaggc
      361 acccattaca caaatattac ccggtgaatc agaggatgct tacaattctt ttaaatcaaa
      421 gatattgcac ttaaaaggtg ataggaagga ttatgatttt gtgcaaacta gtcttgctgc
      481 tgaaggcttc gatgttgtat atgatatcaa tggtcgtgag gccgaagagg tggagcctat
      541 attggatgca ttgccaaatt tagaacagta catatactgt tcttcagctg gtgtttacct
      601 caaatctgat cttttgccac attgtgagac tgatgcggtt gatcctaaaa gtcgacacaa
      661 ggggaagctc gaaaccgagg ccttattgga gtcaaagggt gttaactaca cctctattag
      721 accagtttat atttatggcc cattgaacta caaccctgtt gaagaatggt ttttccatag
      781 attaaaagca ggccgaccaa tcccgattcc taactctggt ttacaagtaa ctcaacttgg
      841 tcatgtaaag gatttggcta cagcttttat taaggttcta ggaaacgaaa aagcagctaa
      901 gcaagtatac aacatatcag gagatagata tgttaccttc gatggactcg caagagcttg
      961 tgctaaagct ggtggattcc ctgagcccga gatcattcac tacaatccta aggagttcga
     1021 ttttgggaaa aagaaagcgt ttccgttccg ggaccagcat ttctttgcgt cggtggagaa
     1081 agcaaaggcg gaacttggaa tcatccctga atacggctta gttgaaggtt tgaccgactc
     1141 gtataatctg gatttcggta gaggaacatt taggaaagaa gccgatttct ctacagatga
     1201 cattattctt ggaaagagcc ttgttttaag ctgatttaac cacatatgac attattgtgt
     1261 tgttttaagt tgaaaatttt accacc
//
LOCUS       XM_071830380            2436 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X1, mRNA.
ACCESSION   XM_071830380
VERSION     XM_071830380.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2436
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     CDS             193..423
                     /gene="LOC139840157"
                     /codon_start=1
                     /product="probable inactive purple acid phosphatase 1"
                     /protein_id="XP_071686481.1"
                     /db_xref="GeneID:139840157"
                     /translation="MFMRCTEFAIKSDCLKGAPARTVGWRDPGFIHTSLLKDLWPNQM
                     YTYKLWHKFQNDTIIWSETYQFKSSPFPVNAG"
     misc_feature    <268..393
                     /gene="LOC139840157"
                     /note="Purple acid Phosphatase, N-terminal domain; Region:
                     Pur_ac_phosph_N; pfam16656"
                     /db_xref="CDD:465220"
ORIGIN      
        1 ccaaaaccga tcctcaccaa accctaacta gatttcgttc cctaaaaccg atcatcaatt
       61 cttcgatgaa tccagctaaa cttaacgaag attacgtcta atcatcaaaa catcccttcg
      121 tcttctcatc taatttgttc tacttcacgc ttcctttagt cacctacatc tcctgtatta
      181 cgttatcact gtatgtttat gagatgcacg gaatttgcca ttaaatcaga ttgcttgaaa
      241 ggtgcaccag caagaactgt gggttggcgt gatcctggtt ttattcatac tagcttgttg
      301 aaagacttat ggcccaatca aatgtataca tacaagttat ggcacaaatt tcaaaatgat
      361 accatcattt ggagcgagac gtaccagttt aaatcatctc cgtttccagt caatgcagga
      421 taaggctgac cgatccaaca aatacaataa ctttccacct ggatccctta atactacaaa
      481 gcaactcatc gatgaattgg aaagcttcga tattctccat atcggagata tttgctatgc
      541 aaatgggtat ctttcacaat gggatcaatt tctcctttcc aaccagttgt atcagttgta
      601 ctgtatataa attctaggag ttcgactttg accagaatcc tacaaccttt tacatttact
      661 taatttttta attggcgtct aagttattcc ttgttttaat tctacgaaaa ttttatgtgg
      721 ttatggacca tttctcaaag tcaaaattat ttttatagca ttaagaattt ttaatttaat
      781 atgcttgacc tcaaaagtca aatcaactgt taatcttgaa taactgattt ggagttatta
      841 cactcaaact tattactttc aaagatcaga tgaaatcaag aaactttttg aaagaaatat
      901 aatatctgta aaaagtaaat tgatatatgt ttgactccaa aagtcaaact ttgtctctta
      961 atcttcaagg tctagaatat taatcttgga taaccttata agaataagat gttgtcgtat
     1021 gatttgataa taattaattg aatgttaagt gtttatataa gatgtatgtt attagtagta
     1081 atttctaaaa taagaagaat tttacaatat tatttgacac aaagatacat cgaggtgtca
     1141 tgtgcgatta cattataacc ttgttataac tttattaact ggtaatctca actagcacaa
     1201 atggctgtcg aatccaaggt tttgaacaag attttttttt ttgttttgtt ttttttttgt
     1261 attaagcagg ttagttcttt ttatgcacaa cttatatggt atgaccttgg ggtggtaaaa
     1321 tgaatgggat gggttgggtt gtcgctcaaa acctattgag gaaatttcgt gtttgaaaca
     1381 cgaagaatgg tcattgaaga agtttgaaac acgaagctat atgagcatgt acagtcacct
     1441 aaagcatgat ctctgatctg atatccagct caaccaatcg atctttttta acatttttgg
     1501 tagaaactat aataatacta atctacaaga ctcaacagtt ttttcgtttt gacgcaggag
     1561 taggttctga gtaaccaaac caccacatat catccaatag cgttccagga tgaaacagtt
     1621 ggagcaccta acatggtgat tatagttgaa gaagcgaata aggttattaa ttttaaacta
     1681 atgaaaacat tccaagtttt cctaaactct aggtcgggta agacaggtaa cgggtaaaaa
     1741 tgagtgaatc tcaagtactg aaatataggt attgaacaac tactaaatgt cactaatatt
     1801 catggtgcat acataaactt atatactgat tataaacaat acttatggga tgtgatatga
     1861 taatagcaga gtttaaagct tcaatatgat tagtgtacaa aatgataaga accataaaat
     1921 tatttataga tagcgctgaa aaggttggtg tttttgcagg tacatttctt atgagatgta
     1981 tagagaatgg ggaatttgcc atcttttcat tgggattgcc attattatca agtgaaaatg
     2041 caaattattg agttcacatt tgtgttctta gtcttcttat aataaggcta atttaaatct
     2101 acaagttaat ggtatccatg ttttatttac tgctctaatt ctatttaata aaatattttg
     2161 cctttcttac cttttttata acattttttc aaattctttt tagttcattt tcatttgaga
     2221 aatcttttac tagaaacctt gaaagaaaca gcgcatgaaa gtaacaaaga aggaaggatc
     2281 ttgaatgtct catcgcgtag tgaaggaatt catttcgacg agattgacag taaaacttgt
     2341 aaactacaag tacttgattt tatccaaata tcggctattg cccaaataaa ttatcagttt
     2401 tcagtagaag gattaccaat acatcttcca catctt
//
LOCUS       XR_011757253            3035 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X2, misc_RNA.
ACCESSION   XR_011757253
VERSION     XR_011757253.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3035
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..3035
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X2"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag ttgatattct gctttgctaa
      541 tactgcggtt ctatgctgga acattgactt tggaccacaa tagcatgtgt ggtgtgtaaa
      601 agatatattt tatttacaaa gattatcaat aaatgaatca attatcatgg gaatttcata
      661 ttaaccattc ttgaagtggc aagattcaat aatttattga ttggtatatt cacatgtatg
      721 caggtgcacc agcaagaact gtgggttggc gtgatcctgg ttttattcat actagcttgt
      781 tgaaagactt atggcccaat caaatgtata catacaagtt atggcacaaa tttcaaaatg
      841 ataccatcat ttggagcgag acgtaccagt ttaaatcatc tccgtttcca ggttaacatt
      901 ctctacgacg tgttattatt tttggtgaca tgggaaaggt ttgtacttta tcatccaaat
      961 tgtgttattt taatagaaaa atcaatttct tgcgttattt atgtgaagtc aatgcaggat
     1021 aaggctgacc gatccaacaa atacaataac tttccacctg gatcccttaa tactacaaag
     1081 caactcatcg atgaattgga aagcttcgat attctccata tcggagatat ttgctatgca
     1141 aatgggtatc tttcacaatg ggatcaattt ctcctttcca accagttgta tcagttgtac
     1201 tgtatataaa ttctaggagt tcgactttga ccagaatcct acaacctttt acatttactt
     1261 aattttttaa ttggcgtcta agttattcct tgttttaatt ctacgaaaat tttatgtggt
     1321 tatggaccat ttctcaaagt caaaattatt tttatagcat taagaatttt taatttaata
     1381 tgcttgacct caaaagtcaa atcaactgtt aatcttgaat aactgatttg gagttattac
     1441 actcaaactt attactttca aagatcagat gaaatcaaga aactttttga aagaaatata
     1501 atatctgtaa aaagtaaatt gatatatgtt tgactccaaa agtcaaactt tgtctcttaa
     1561 tcttcaaggt ctagaatatt aatcttggat aaccttataa gaataagatg ttgtcgtatg
     1621 atttgataat aattaattga atgttaagtg tttatataag atgtatgtta ttagtagtaa
     1681 tttctaaaat aagaagaatt ttacaatatt atttgacaca aagatacatc gaggtgtcat
     1741 gtgcgattac attataacct tgttataact ttattaactg gtaatctcaa ctagcacaaa
     1801 tggctgtcga atccaaggtt ttgaacaaga tttttttttt tgttttgttt tttttttgta
     1861 ttaagcaggt tagttctttt tatgcacaac ttatatggta tgaccttggg gtggtaaaat
     1921 gaatgggatg ggttgggttg tcgctcaaaa cctattgagg aaatttcgtg tttgaaacac
     1981 gaagaatggt cattgaagaa gtttgaaaca cgaagctata tgagcatgta cagtcaccta
     2041 aagcatgatc tctgatctga tatccagctc aaccaatcga tcttttttaa catttttggt
     2101 agaaactata ataatactaa tctacaagac tcaacagttt tttcgttttg acgcaggagt
     2161 aggttctgag taaccaaacc accacatatc atccaatagc gttccaggat gaaacagttg
     2221 gagcacctaa catggtgatt atagttgaag aagcgaataa ggttattaat tttaaactaa
     2281 tgaaaacatt ccaagttttc ctaaactcta ggtcgggtaa gacaggtaac gggtaaaaat
     2341 gagtgaatct caagtactga aatataggta ttgaacaact actaaatgtc actaatattc
     2401 atggtgcata cataaactta tatactgatt ataaacaata cttatgggat gtgatatgat
     2461 aatagcagag tttaaagctt caatatgatt agtgtacaaa atgataagaa ccataaaatt
     2521 atttatagat agcgctgaaa aggttggtgt ttttgcaggt acatttctta tgagatgtat
     2581 agagaatggg gaatttgcca tcttttcatt gggattgcca ttattatcaa gtgaaaatgc
     2641 aaattattga gttcacattt gtgttcttag tcttcttata ataaggctaa tttaaatcta
     2701 caagttaatg gtatccatgt tttatttact gctctaattc tatttaataa aatattttgc
     2761 ctttcttacc ttttttataa cattttttca aattcttttt agttcatttt catttgagaa
     2821 atcttttact agaaaccttg aaagaaacag cgcatgaaag taacaaagaa ggaaggatct
     2881 tgaatgtctc atcgcgtagt gaaggaattc atttcgacga gattgacagt aaaacttgta
     2941 aactacaagt acttgatttt atccaaatat cggctattgc ccaaataaat tatcagtttt
     3001 cagtagaagg attaccaata catcttccac atctt
//
LOCUS       XR_011757254            2919 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X3, misc_RNA.
ACCESSION   XR_011757254
VERSION     XR_011757254.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2919
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2919
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2919
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X3"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 ccaaaaccga tcctcaccaa accctaacta gatttcgttc cctaaaaccg atcatcaatt
       61 cttcgatgaa tccagctaaa cttaacgaag attacgtcta atcatcaaaa catcccttcg
      121 tcttctcatc taatttgttc tacttcacgc ttcctttagt cacctacatc tcctgtatta
      181 cgttatcact gtatgtttat gagatgcacg gaatttgcca ttaaatcaga ttgcttgaaa
      241 gttttggagt atgatataaa tggagtatca acaataaaga tgagtttgca ggtgttctta
      301 tgccggaagt gagctacttc tctgttaaag atgcaatata ttttatatat agtaatttta
      361 tataatctgc aatatatttg ccattagatc agattgcttg aaagttgata ttctgctttg
      421 ctaatactgc ggttctatgc tggaacattg actttggacc acaatagcat gtgtggtgtg
      481 taaaagatat attttattta caaagattat caataaatga atcaattatc atgggaattt
      541 catattaacc attcttgaag tggcaagatt caataattta ttgattggta tattcacatg
      601 tatgcaggtg caccagcaag aactgtgggt tggcgtgatc ctggttttat tcatactagc
      661 ttgttgaaag acttatggcc caatcaaatg tatacataca agttatggca caaatttcaa
      721 aatgatacca tcatttggag cgagacgtac cagtttaaat catctccgtt tccaggttaa
      781 cattctctac gacgtgttat tatttttggt gacatgggaa aggtttgtac tttatcatcc
      841 aaattgtgtt attttaatag aaaaatcaat ttcttgcgtt atttatgtga agtcaatgca
      901 ggataaggct gaccgatcca acaaatacaa taactttcca cctggatccc ttaatactac
      961 aaagcaactc atcgatgaat tggaaagctt cgatattctc catatcggag atatttgcta
     1021 tgcaaatggg tatctttcac aatgggatca atttctcctt tccaaccagt tgtatcagtt
     1081 gtactgtata taaattctag gagttcgact ttgaccagaa tcctacaacc ttttacattt
     1141 acttaatttt ttaattggcg tctaagttat tccttgtttt aattctacga aaattttatg
     1201 tggttatgga ccatttctca aagtcaaaat tatttttata gcattaagaa tttttaattt
     1261 aatatgcttg acctcaaaag tcaaatcaac tgttaatctt gaataactga tttggagtta
     1321 ttacactcaa acttattact ttcaaagatc agatgaaatc aagaaacttt ttgaaagaaa
     1381 tataatatct gtaaaaagta aattgatata tgtttgactc caaaagtcaa actttgtctc
     1441 ttaatcttca aggtctagaa tattaatctt ggataacctt ataagaataa gatgttgtcg
     1501 tatgatttga taataattaa ttgaatgtta agtgtttata taagatgtat gttattagta
     1561 gtaatttcta aaataagaag aattttacaa tattatttga cacaaagata catcgaggtg
     1621 tcatgtgcga ttacattata accttgttat aactttatta actggtaatc tcaactagca
     1681 caaatggctg tcgaatccaa ggttttgaac aagatttttt tttttgtttt gttttttttt
     1741 tgtattaagc aggttagttc tttttatgca caacttatat ggtatgacct tggggtggta
     1801 aaatgaatgg gatgggttgg gttgtcgctc aaaacctatt gaggaaattt cgtgtttgaa
     1861 acacgaagaa tggtcattga agaagtttga aacacgaagc tatatgagca tgtacagtca
     1921 cctaaagcat gatctctgat ctgatatcca gctcaaccaa tcgatctttt ttaacatttt
     1981 tggtagaaac tataataata ctaatctaca agactcaaca gttttttcgt tttgacgcag
     2041 gagtaggttc tgagtaacca aaccaccaca tatcatccaa tagcgttcca ggatgaaaca
     2101 gttggagcac ctaacatggt gattatagtt gaagaagcga ataaggttat taattttaaa
     2161 ctaatgaaaa cattccaagt tttcctaaac tctaggtcgg gtaagacagg taacgggtaa
     2221 aaatgagtga atctcaagta ctgaaatata ggtattgaac aactactaaa tgtcactaat
     2281 attcatggtg catacataaa cttatatact gattataaac aatacttatg ggatgtgata
     2341 tgataatagc agagtttaaa gcttcaatat gattagtgta caaaatgata agaaccataa
     2401 aattatttat agatagcgct gaaaaggttg gtgtttttgc aggtacattt cttatgagat
     2461 gtatagagaa tggggaattt gccatctttt cattgggatt gccattatta tcaagtgaaa
     2521 atgcaaatta ttgagttcac atttgtgttc ttagtcttct tataataagg ctaatttaaa
     2581 tctacaagtt aatggtatcc atgttttatt tactgctcta attctattta ataaaatatt
     2641 ttgcctttct tacctttttt ataacatttt ttcaaattct ttttagttca ttttcatttg
     2701 agaaatcttt tactagaaac cttgaaagaa acagcgcatg aaagtaacaa agaaggaagg
     2761 atcttgaatg tctcatcgcg tagtgaagga attcatttcg acgagattga cagtaaaact
     2821 tgtaaactac aagtacttga ttttatccaa atatcggcta ttgcccaaat aaattatcag
     2881 ttttcagtag aaggattacc aatacatctt ccacatctt
//
LOCUS       XR_011757255            2903 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X4, misc_RNA.
ACCESSION   XR_011757255
VERSION     XR_011757255.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2903
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2903
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X4"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag ttgatattct gctttgctaa
      541 tactgcggtt ctatgctgga acattgactt tggaccacaa tagcatgtgt ggtgcaccag
      601 caagaactgt gggttggcgt gatcctggtt ttattcatac tagcttgttg aaagacttat
      661 ggcccaatca aatgtataca tacaagttat ggcacaaatt tcaaaatgat accatcattt
      721 ggagcgagac gtaccagttt aaatcatctc cgtttccagg ttaacattct ctacgacgtg
      781 ttattatttt tggtgacatg ggaaaggttt gtactttatc atccaaattg tgttatttta
      841 atagaaaaat caatttcttg cgttatttat gtgaagtcaa tgcaggataa ggctgaccga
      901 tccaacaaat acaataactt tccacctgga tcccttaata ctacaaagca actcatcgat
      961 gaattggaaa gcttcgatat tctccatatc ggagatattt gctatgcaaa tgggtatctt
     1021 tcacaatggg atcaatttct cctttccaac cagttgtatc agttgtactg tatataaatt
     1081 ctaggagttc gactttgacc agaatcctac aaccttttac atttacttaa ttttttaatt
     1141 ggcgtctaag ttattccttg ttttaattct acgaaaattt tatgtggtta tggaccattt
     1201 ctcaaagtca aaattatttt tatagcatta agaattttta atttaatatg cttgacctca
     1261 aaagtcaaat caactgttaa tcttgaataa ctgatttgga gttattacac tcaaacttat
     1321 tactttcaaa gatcagatga aatcaagaaa ctttttgaaa gaaatataat atctgtaaaa
     1381 agtaaattga tatatgtttg actccaaaag tcaaactttg tctcttaatc ttcaaggtct
     1441 agaatattaa tcttggataa ccttataaga ataagatgtt gtcgtatgat ttgataataa
     1501 ttaattgaat gttaagtgtt tatataagat gtatgttatt agtagtaatt tctaaaataa
     1561 gaagaatttt acaatattat ttgacacaaa gatacatcga ggtgtcatgt gcgattacat
     1621 tataaccttg ttataacttt attaactggt aatctcaact agcacaaatg gctgtcgaat
     1681 ccaaggtttt gaacaagatt tttttttttg ttttgttttt tttttgtatt aagcaggtta
     1741 gttcttttta tgcacaactt atatggtatg accttggggt ggtaaaatga atgggatggg
     1801 ttgggttgtc gctcaaaacc tattgaggaa atttcgtgtt tgaaacacga agaatggtca
     1861 ttgaagaagt ttgaaacacg aagctatatg agcatgtaca gtcacctaaa gcatgatctc
     1921 tgatctgata tccagctcaa ccaatcgatc ttttttaaca tttttggtag aaactataat
     1981 aatactaatc tacaagactc aacagttttt tcgttttgac gcaggagtag gttctgagta
     2041 accaaaccac cacatatcat ccaatagcgt tccaggatga aacagttgga gcacctaaca
     2101 tggtgattat agttgaagaa gcgaataagg ttattaattt taaactaatg aaaacattcc
     2161 aagttttcct aaactctagg tcgggtaaga caggtaacgg gtaaaaatga gtgaatctca
     2221 agtactgaaa tataggtatt gaacaactac taaatgtcac taatattcat ggtgcataca
     2281 taaacttata tactgattat aaacaatact tatgggatgt gatatgataa tagcagagtt
     2341 taaagcttca atatgattag tgtacaaaat gataagaacc ataaaattat ttatagatag
     2401 cgctgaaaag gttggtgttt ttgcaggtac atttcttatg agatgtatag agaatgggga
     2461 atttgccatc ttttcattgg gattgccatt attatcaagt gaaaatgcaa attattgagt
     2521 tcacatttgt gttcttagtc ttcttataat aaggctaatt taaatctaca agttaatggt
     2581 atccatgttt tatttactgc tctaattcta tttaataaaa tattttgcct ttcttacctt
     2641 ttttataaca ttttttcaaa ttctttttag ttcattttca tttgagaaat cttttactag
     2701 aaaccttgaa agaaacagcg catgaaagta acaaagaagg aaggatcttg aatgtctcat
     2761 cgcgtagtga aggaattcat ttcgacgaga ttgacagtaa aacttgtaaa ctacaagtac
     2821 ttgattttat ccaaatatcg gctattgccc aaataaatta tcagttttca gtagaaggat
     2881 taccaataca tcttccacat ctt
//
LOCUS       XR_011757256            2956 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X5, misc_RNA.
ACCESSION   XR_011757256
VERSION     XR_011757256.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2956
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2956
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X5"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag ttgatattct gctttgctaa
      541 tactgcggtt ctatgctgga acattgactt tggaccacaa tagcatgtgt ggtgtgtaaa
      601 agatatattt tatttacaaa gattatcaat aaatgaatca attatcatgg gaatttcata
      661 ttaaccattc ttgaagtggc aagattcaat aatttattga ttggtatatt cacatgtatg
      721 caggtgcacc agcaagaact gtgggttggc gtgatcctgg ttttattcat actagcttgt
      781 tgaaagactt atggcccaat caaatgtata catacaagtt atggcacaaa tttcaaaatg
      841 ataccatcat ttggagcgag acgtaccagt ttaaatcatc tccgtttcca ggttaacatt
      901 ctctacgacg tgttattatt tttggtgaca tgggaaagga taaggctgac cgatccaaca
      961 aatacaataa ctttccacct ggatccctta atactacaaa gcaactcatc gatgaattgg
     1021 aaagcttcga tattctccat atcggagata tttgctatgc aaatgggtat ctttcacaat
     1081 gggatcaatt tctcctttcc aaccagttgt atcagttgta ctgtatataa attctaggag
     1141 ttcgactttg accagaatcc tacaaccttt tacatttact taatttttta attggcgtct
     1201 aagttattcc ttgttttaat tctacgaaaa ttttatgtgg ttatggacca tttctcaaag
     1261 tcaaaattat ttttatagca ttaagaattt ttaatttaat atgcttgacc tcaaaagtca
     1321 aatcaactgt taatcttgaa taactgattt ggagttatta cactcaaact tattactttc
     1381 aaagatcaga tgaaatcaag aaactttttg aaagaaatat aatatctgta aaaagtaaat
     1441 tgatatatgt ttgactccaa aagtcaaact ttgtctctta atcttcaagg tctagaatat
     1501 taatcttgga taaccttata agaataagat gttgtcgtat gatttgataa taattaattg
     1561 aatgttaagt gtttatataa gatgtatgtt attagtagta atttctaaaa taagaagaat
     1621 tttacaatat tatttgacac aaagatacat cgaggtgtca tgtgcgatta cattataacc
     1681 ttgttataac tttattaact ggtaatctca actagcacaa atggctgtcg aatccaaggt
     1741 tttgaacaag attttttttt ttgttttgtt ttttttttgt attaagcagg ttagttcttt
     1801 ttatgcacaa cttatatggt atgaccttgg ggtggtaaaa tgaatgggat gggttgggtt
     1861 gtcgctcaaa acctattgag gaaatttcgt gtttgaaaca cgaagaatgg tcattgaaga
     1921 agtttgaaac acgaagctat atgagcatgt acagtcacct aaagcatgat ctctgatctg
     1981 atatccagct caaccaatcg atctttttta acatttttgg tagaaactat aataatacta
     2041 atctacaaga ctcaacagtt ttttcgtttt gacgcaggag taggttctga gtaaccaaac
     2101 caccacatat catccaatag cgttccagga tgaaacagtt ggagcaccta acatggtgat
     2161 tatagttgaa gaagcgaata aggttattaa ttttaaacta atgaaaacat tccaagtttt
     2221 cctaaactct aggtcgggta agacaggtaa cgggtaaaaa tgagtgaatc tcaagtactg
     2281 aaatataggt attgaacaac tactaaatgt cactaatatt catggtgcat acataaactt
     2341 atatactgat tataaacaat acttatggga tgtgatatga taatagcaga gtttaaagct
     2401 tcaatatgat tagtgtacaa aatgataaga accataaaat tatttataga tagcgctgaa
     2461 aaggttggtg tttttgcagg tacatttctt atgagatgta tagagaatgg ggaatttgcc
     2521 atcttttcat tgggattgcc attattatca agtgaaaatg caaattattg agttcacatt
     2581 tgtgttctta gtcttcttat aataaggcta atttaaatct acaagttaat ggtatccatg
     2641 ttttatttac tgctctaatt ctatttaata aaatattttg cctttcttac cttttttata
     2701 acattttttc aaattctttt tagttcattt tcatttgaga aatcttttac tagaaacctt
     2761 gaaagaaaca gcgcatgaaa gtaacaaaga aggaaggatc ttgaatgtct catcgcgtag
     2821 tgaaggaatt catttcgacg agattgacag taaaacttgt aaactacaag tacttgattt
     2881 tatccaaata tcggctattg cccaaataaa ttatcagttt tcagtagaag gattaccaat
     2941 acatcttcca catctt
//
LOCUS       XR_011757257            2898 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X6, misc_RNA.
ACCESSION   XR_011757257
VERSION     XR_011757257.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2898
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2898
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X6"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag ttgatattct gctttgctaa
      541 tactgcggtt ctatgctgga acattgactt tggaccacaa tagcatgtgc accagcaaga
      601 actgtgggtt ggcgtgatcc tggttttatt catactagct tgttgaaaga cttatggccc
      661 aatcaaatgt atacatacaa gttatggcac aaatttcaaa atgataccat catttggagc
      721 gagacgtacc agtttaaatc atctccgttt ccaggttaac attctctacg acgtgttatt
      781 atttttggtg acatgggaaa ggtttgtact ttatcatcca aattgtgtta ttttaataga
      841 aaaatcaatt tcttgcgtta tttatgtgaa gtcaatgcag gataaggctg accgatccaa
      901 caaatacaat aactttccac ctggatccct taatactaca aagcaactca tcgatgaatt
      961 ggaaagcttc gatattctcc atatcggaga tatttgctat gcaaatgggt atctttcaca
     1021 atgggatcaa tttctccttt ccaaccagtt gtatcagttg tactgtatat aaattctagg
     1081 agttcgactt tgaccagaat cctacaacct tttacattta cttaattttt taattggcgt
     1141 ctaagttatt ccttgtttta attctacgaa aattttatgt ggttatggac catttctcaa
     1201 agtcaaaatt atttttatag cattaagaat ttttaattta atatgcttga cctcaaaagt
     1261 caaatcaact gttaatcttg aataactgat ttggagttat tacactcaaa cttattactt
     1321 tcaaagatca gatgaaatca agaaactttt tgaaagaaat ataatatctg taaaaagtaa
     1381 attgatatat gtttgactcc aaaagtcaaa ctttgtctct taatcttcaa ggtctagaat
     1441 attaatcttg gataacctta taagaataag atgttgtcgt atgatttgat aataattaat
     1501 tgaatgttaa gtgtttatat aagatgtatg ttattagtag taatttctaa aataagaaga
     1561 attttacaat attatttgac acaaagatac atcgaggtgt catgtgcgat tacattataa
     1621 ccttgttata actttattaa ctggtaatct caactagcac aaatggctgt cgaatccaag
     1681 gttttgaaca agattttttt ttttgttttg tttttttttt gtattaagca ggttagttct
     1741 ttttatgcac aacttatatg gtatgacctt ggggtggtaa aatgaatggg atgggttggg
     1801 ttgtcgctca aaacctattg aggaaatttc gtgtttgaaa cacgaagaat ggtcattgaa
     1861 gaagtttgaa acacgaagct atatgagcat gtacagtcac ctaaagcatg atctctgatc
     1921 tgatatccag ctcaaccaat cgatcttttt taacattttt ggtagaaact ataataatac
     1981 taatctacaa gactcaacag ttttttcgtt ttgacgcagg agtaggttct gagtaaccaa
     2041 accaccacat atcatccaat agcgttccag gatgaaacag ttggagcacc taacatggtg
     2101 attatagttg aagaagcgaa taaggttatt aattttaaac taatgaaaac attccaagtt
     2161 ttcctaaact ctaggtcggg taagacaggt aacgggtaaa aatgagtgaa tctcaagtac
     2221 tgaaatatag gtattgaaca actactaaat gtcactaata ttcatggtgc atacataaac
     2281 ttatatactg attataaaca atacttatgg gatgtgatat gataatagca gagtttaaag
     2341 cttcaatatg attagtgtac aaaatgataa gaaccataaa attatttata gatagcgctg
     2401 aaaaggttgg tgtttttgca ggtacatttc ttatgagatg tatagagaat ggggaatttg
     2461 ccatcttttc attgggattg ccattattat caagtgaaaa tgcaaattat tgagttcaca
     2521 tttgtgttct tagtcttctt ataataaggc taatttaaat ctacaagtta atggtatcca
     2581 tgttttattt actgctctaa ttctatttaa taaaatattt tgcctttctt acctttttta
     2641 taacattttt tcaaattctt tttagttcat tttcatttga gaaatctttt actagaaacc
     2701 ttgaaagaaa cagcgcatga aagtaacaaa gaaggaagga tcttgaatgt ctcatcgcgt
     2761 agtgaaggaa ttcatttcga cgagattgac agtaaaactt gtaaactaca agtacttgat
     2821 tttatccaaa tatcggctat tgcccaaata aattatcagt tttcagtaga aggattacca
     2881 atacatcttc cacatctt
//
LOCUS       XR_011757258            2832 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X7, misc_RNA.
ACCESSION   XR_011757258
VERSION     XR_011757258.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2832
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2832
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X7"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag gtgcaccagc aagaactgtg
      541 ggttggcgtg atcctggttt tattcatact agcttgttga aagacttatg gcccaatcaa
      601 atgtatacat acaagttatg gcacaaattt caaaatgata ccatcatttg gagcgagacg
      661 taccagttta aatcatctcc gtttccaggt taacattctc tacgacgtgt tattattttt
      721 ggtgacatgg gaaaggtttg tactttatca tccaaattgt gttattttaa tagaaaaatc
      781 aatttcttgc gttatttatg tgaagtcaat gcaggataag gctgaccgat ccaacaaata
      841 caataacttt ccacctggat cccttaatac tacaaagcaa ctcatcgatg aattggaaag
      901 cttcgatatt ctccatatcg gagatatttg ctatgcaaat gggtatcttt cacaatggga
      961 tcaatttctc ctttccaacc agttgtatca gttgtactgt atataaattc taggagttcg
     1021 actttgacca gaatcctaca accttttaca tttacttaat tttttaattg gcgtctaagt
     1081 tattccttgt tttaattcta cgaaaatttt atgtggttat ggaccatttc tcaaagtcaa
     1141 aattattttt atagcattaa gaatttttaa tttaatatgc ttgacctcaa aagtcaaatc
     1201 aactgttaat cttgaataac tgatttggag ttattacact caaacttatt actttcaaag
     1261 atcagatgaa atcaagaaac tttttgaaag aaatataata tctgtaaaaa gtaaattgat
     1321 atatgtttga ctccaaaagt caaactttgt ctcttaatct tcaaggtcta gaatattaat
     1381 cttggataac cttataagaa taagatgttg tcgtatgatt tgataataat taattgaatg
     1441 ttaagtgttt atataagatg tatgttatta gtagtaattt ctaaaataag aagaatttta
     1501 caatattatt tgacacaaag atacatcgag gtgtcatgtg cgattacatt ataaccttgt
     1561 tataacttta ttaactggta atctcaacta gcacaaatgg ctgtcgaatc caaggttttg
     1621 aacaagattt ttttttttgt tttgtttttt ttttgtatta agcaggttag ttctttttat
     1681 gcacaactta tatggtatga ccttggggtg gtaaaatgaa tgggatgggt tgggttgtcg
     1741 ctcaaaacct attgaggaaa tttcgtgttt gaaacacgaa gaatggtcat tgaagaagtt
     1801 tgaaacacga agctatatga gcatgtacag tcacctaaag catgatctct gatctgatat
     1861 ccagctcaac caatcgatct tttttaacat ttttggtaga aactataata atactaatct
     1921 acaagactca acagtttttt cgttttgacg caggagtagg ttctgagtaa ccaaaccacc
     1981 acatatcatc caatagcgtt ccaggatgaa acagttggag cacctaacat ggtgattata
     2041 gttgaagaag cgaataaggt tattaatttt aaactaatga aaacattcca agttttccta
     2101 aactctaggt cgggtaagac aggtaacggg taaaaatgag tgaatctcaa gtactgaaat
     2161 ataggtattg aacaactact aaatgtcact aatattcatg gtgcatacat aaacttatat
     2221 actgattata aacaatactt atgggatgtg atatgataat agcagagttt aaagcttcaa
     2281 tatgattagt gtacaaaatg ataagaacca taaaattatt tatagatagc gctgaaaagg
     2341 ttggtgtttt tgcaggtaca tttcttatga gatgtataga gaatggggaa tttgccatct
     2401 tttcattggg attgccatta ttatcaagtg aaaatgcaaa ttattgagtt cacatttgtg
     2461 ttcttagtct tcttataata aggctaattt aaatctacaa gttaatggta tccatgtttt
     2521 atttactgct ctaattctat ttaataaaat attttgcctt tcttaccttt tttataacat
     2581 tttttcaaat tctttttagt tcattttcat ttgagaaatc ttttactaga aaccttgaaa
     2641 gaaacagcgc atgaaagtaa caaagaagga aggatcttga atgtctcatc gcgtagtgaa
     2701 ggaattcatt tcgacgagat tgacagtaaa acttgtaaac tacaagtact tgattttatc
     2761 caaatatcgg ctattgccca aataaattat cagttttcag tagaaggatt accaatacat
     2821 cttccacatc tt
//
LOCUS       XR_011757259            2684 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X8, misc_RNA.
ACCESSION   XR_011757259
VERSION     XR_011757259.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2684
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2684
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X8"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag ttgatattct gctttgctaa
      541 tactgcggtt ctatgctgga acattgactt tggaccacaa tagcatgtgt ggtgtgtaaa
      601 agatatattt tatttacaaa gattatcaat aaatgaatca attatcatgg gaatttcata
      661 ttaaccattc ttgaagtggc aagattcaat aatttattga ttggtatatt cacatgtatg
      721 caggtgcacc agcaagaact gtgggttggc gtgatcctgg ttttattcat actagcttgt
      781 tgaaagactt atggcccaat caaatgtata catacaagtt atggcacaaa tttcaaaatg
      841 ataccatcat ttggagcgag acgtaccagt ttaaatcatc tccgtttcca ggttaacatt
      901 ctctacgacg tgttattatt tttggtgaca tgggaaaggt ttgtacttta tcatccaaat
      961 tgtgttattt taatagaaaa atcaatttct tgcgttattt atgtgaagtc aatgcaggat
     1021 aaggctgacc gatccaacaa atacaataac tttccacctg gatcccttaa tactacaaag
     1081 caactcatcg atgaattgga aagcttcgat attctccata tcggagatat ttgctatgca
     1141 aatgggtatc tttcacaatg ggatcaattt ctcctttcca accagttgta tcagttgtac
     1201 tgtatataaa ttctaggagt tcgactttga ccagaatcct acaacctttt acatttactt
     1261 aattttttaa ttggcgtcta agttattcct tgttttaatt ctacgaaaat tttatgtggt
     1321 tatggaccat ttctcaaagt caaaattatt tttatagcat taagaatttt taatttaata
     1381 tgcttgacct caaaagtcaa atcaactgtt aatcttgaat aactgatttg gagttattac
     1441 actcaaactt attactttca aagatcagat gaaatcaaga aactttttga aagaaatata
     1501 atatctgtaa aaagtaaatt gatatatgtt tgactccaaa agtcaaactt tgtctcttaa
     1561 tcttcaaggt ctagaatatt aatcttggat aaccttataa gaataagatg ttgtcgtatg
     1621 atttgataat aattaattga atgttaagtg tttatataag atgtatgtta ttagtagtaa
     1681 tttctaaaat aagaagaatt ttacaatatt atttgacaca aagatacatc gaggtgtcat
     1741 gtgcgattac attataacct tgttataact ttattaactg gtaatctcaa ctagcacaaa
     1801 tggctgtcga atccaaggtt ttgaacaaga tttttttttt tgttttgttt tttttttgta
     1861 ttaagcaggt tagttctttt tatgcacaac ttatatggta tgaccttggg gtggtaaaat
     1921 gaatgggatg ggttgggttg tcgctcaaaa cctattgagg aaatttcgtg tttgaaacac
     1981 gaagaatggt cattgaagaa gtttgaaaca cgaagctata tgagcatgta cagtcaccta
     2041 aagcatgatc tctgatctga tatccagctc aaccaatcga tcttttttaa catttttggt
     2101 agaaactata ataatactaa tctacaagac tcaacagttt tttcgttttg acgcaggagt
     2161 aggttctgag taaccaaacc accacatatc atccaatagc gttccaggta catttcttat
     2221 gagatgtata gagaatgggg aatttgccat cttttcattg ggattgccat tattatcaag
     2281 tgaaaatgca aattattgag ttcacatttg tgttcttagt cttcttataa taaggctaat
     2341 ttaaatctac aagttaatgg tatccatgtt ttatttactg ctctaattct atttaataaa
     2401 atattttgcc tttcttacct tttttataac attttttcaa attcttttta gttcattttc
     2461 atttgagaaa tcttttacta gaaaccttga aagaaacagc gcatgaaagt aacaaagaag
     2521 gaaggatctt gaatgtctca tcgcgtagtg aaggaattca tttcgacgag attgacagta
     2581 aaacttgtaa actacaagta cttgatttta tccaaatatc ggctattgcc caaataaatt
     2641 atcagttttc agtagaagga ttaccaatac atcttccaca tctt
//
LOCUS       XR_011757260            2024 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X9, misc_RNA.
ACCESSION   XR_011757260
VERSION     XR_011757260.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2024
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2024
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X9"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag ttgatattct gctttgctaa
      541 tactgcggtt ctatgctgga acattgactt tggaccacaa tagcatgtgt ggtgtgtaaa
      601 agatatattt tatttacaaa gattatcaat aaatgaatca attatcatgg gaatttcata
      661 ttaaccattc ttgaagtggc aagattcaat aatttattga ttggtatatt cacatgtatg
      721 caggtgcacc agcaagaact gtgggttggc gtgatcctgg ttttattcat actagcttgt
      781 tgaaagactt atggcccaat caaatgtata catacaagtt atggcacaaa tttcaaaatg
      841 ataccatcat ttggagcgag acgtaccagt ttaaatcatc tccgtttcca ggttaacatt
      901 ctctacgacg tgttattatt tttggtgaca tgggaaaggt ttgtacttta tcatccaaat
      961 tgtgttattt taatagaaaa atcaatttct tgcgttattt atgtgaagtc aatgcaggat
     1021 aaggctgacc gatccaacaa atacaataac tttccacctg gatcccttaa tactacaaag
     1081 caactcatcg atgaattgga aagcttcgat attctccata tcggagatat ttgctatgca
     1141 aatgggagta ggttctgagt aaccaaacca ccacatatca tccaatagcg ttccaggatg
     1201 aaacagttgg agcacctaac atggtgatta tagttgaaga agcgaataag gttattaatt
     1261 ttaaactaat gaaaacattc caagttttcc taaactctag gtcgggtaag acaggtaacg
     1321 ggtaaaaatg agtgaatctc aagtactgaa atataggtat tgaacaacta ctaaatgtca
     1381 ctaatattca tggtgcatac ataaacttat atactgatta taaacaatac ttatgggatg
     1441 tgatatgata atagcagagt ttaaagcttc aatatgatta gtgtacaaaa tgataagaac
     1501 cataaaatta tttatagata gcgctgaaaa ggttggtgtt tttgcaggta catttcttat
     1561 gagatgtata gagaatgggg aatttgccat cttttcattg ggattgccat tattatcaag
     1621 tgaaaatgca aattattgag ttcacatttg tgttcttagt cttcttataa taaggctaat
     1681 ttaaatctac aagttaatgg tatccatgtt ttatttactg ctctaattct atttaataaa
     1741 atattttgcc tttcttacct tttttataac attttttcaa attcttttta gttcattttc
     1801 atttgagaaa tcttttacta gaaaccttga aagaaacagc gcatgaaagt aacaaagaag
     1861 gaaggatctt gaatgtctca tcgcgtagtg aaggaattca tttcgacgag attgacagta
     1921 aaacttgtaa actacaagta cttgatttta tccaaatatc ggctattgcc caaataaatt
     1981 atcagttttc agtagaagga ttaccaatac atcttccaca tctt
//
LOCUS       XR_011757261            2620 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X10,
            misc_RNA.
ACCESSION   XR_011757261
VERSION     XR_011757261.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2620
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2620
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X10"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 ccaaaaccga tcctcaccaa accctaacta gatttcgttc cctaaaaccg atcatcaatt
       61 cttcgatgaa tccagctaaa cttaacgaag attacgtcta atcatcaaaa catcccttcg
      121 tcttctcatc taatttgttc tacttcacgc ttcctttagt cacctacatc tcctgtatta
      181 cgttatcact gtatgtttat gagatgcacg gaatttgcca ttaaatcaga ttgcttgaaa
      241 gttttggagt atgatataaa tggagtatca acaataaaga tgagtttgca ggtgttctta
      301 tgccggaagt gcaccagcaa gaactgtggg ttggcgtgat cctggtttta ttcatactag
      361 cttgttgaaa gacttatggc ccaatcaaat gtatacatac aagttatggc acaaatttca
      421 aaatgatacc atcatttgga gcgagacgta ccagtttaaa tcatctccgt ttccaggtta
      481 acattctcta cgacgtgtta ttatttttgg tgacatggga aaggtttgta ctttatcatc
      541 caaattgtgt tattttaata gaaaaatcaa tttcttgcgt tatttatgtg aagtcaatgc
      601 aggataaggc tgaccgatcc aacaaataca ataactttcc acctggatcc cttaatacta
      661 caaagcaact catcgatgaa ttggaaagct tcgatattct ccatatcgga gatatttgct
      721 atgcaaatgg gtatctttca caatgggatc aatttctcct ttccaaccag ttgtatcagt
      781 tgtactgtat ataaattcta ggagttcgac tttgaccaga atcctacaac cttttacatt
      841 tacttaattt tttaattggc gtctaagtta ttccttgttt taattctacg aaaattttat
      901 gtggttatgg accatttctc aaagtcaaaa ttatttttat agcattaaga atttttaatt
      961 taatatgctt gacctcaaaa gtcaaatcaa ctgttaatct tgaataactg atttggagtt
     1021 attacactca aacttattac tttcaaagat cagatgaaat caagaaactt tttgaaagaa
     1081 atataatatc tgtaaaaagt aaattgatat atgtttgact ccaaaagtca aactttgtct
     1141 cttaatcttc aaggtctaga atattaatct tggataacct tataagaata agatgttgtc
     1201 gtatgatttg ataataatta attgaatgtt aagtgtttat ataagatgta tgttattagt
     1261 agtaatttct aaaataagaa gaattttaca atattatttg acacaaagat acatcgaggt
     1321 gtcatgtgcg attacattat aaccttgtta taactttatt aactggtaat ctcaactagc
     1381 acaaatggct gtcgaatcca aggttttgaa caagattttt ttttttgttt tgtttttttt
     1441 ttgtattaag caggttagtt ctttttatgc acaacttata tggtatgacc ttggggtggt
     1501 aaaatgaatg ggatgggttg ggttgtcgct caaaacctat tgaggaaatt tcgtgtttga
     1561 aacacgaaga atggtcattg aagaagtttg aaacacgaag ctatatgagc atgtacagtc
     1621 acctaaagca tgatctctga tctgatatcc agctcaacca atcgatcttt tttaacattt
     1681 ttggtagaaa ctataataat actaatctac aagactcaac agttttttcg ttttgacgca
     1741 ggagtaggtt ctgagtaacc aaaccaccac atatcatcca atagcgttcc aggatgaaac
     1801 agttggagca cctaacatgg tgattatagt tgaagaagcg aataaggtta ttaattttaa
     1861 actaatgaaa acattccaag ttttcctaaa ctctaggtcg ggtaagacag gtaacgggta
     1921 aaaatgagtg aatctcaagt actgaaatat aggtattgaa caactactaa atgtcactaa
     1981 tattcatggt gcatacataa acttatatac tgattataaa caatacttat gggatgtgat
     2041 atgataatag cagagtttaa agcttcaata tgattagtgt acaaaatgat aagaaccata
     2101 aaattattta tagatagcgc tgaaaaggtt ggtgtttttg caggtacatt tcttatgaga
     2161 tgtatagaga atggggaatt tgccatcttt tcattgggat tgccattatt atcaagtgaa
     2221 aatgcaaatt attgagttca catttgtgtt cttagtcttc ttataataag gctaatttaa
     2281 atctacaagt taatggtatc catgttttat ttactgctct aattctattt aataaaatat
     2341 tttgcctttc ttaccttttt tataacattt tttcaaattc tttttagttc attttcattt
     2401 gagaaatctt ttactagaaa ccttgaaaga aacagcgcat gaaagtaaca aagaaggaag
     2461 gatcttgaat gtctcatcgc gtagtgaagg aattcatttc gacgagattg acagtaaaac
     2521 ttgtaaacta caagtacttg attttatcca aatatcggct attgcccaaa taaattatca
     2581 gttttcagta gaaggattac caatacatct tccacatctt
//
LOCUS       XR_011757262            1673 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X11,
            misc_RNA.
ACCESSION   XR_011757262
VERSION     XR_011757262.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1673
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..1673
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X11"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag ttgatattct gctttgctaa
      541 tactgcggtt ctatgctgga acattgactt tggaccacaa tagcatgtgt ggtgtgtaaa
      601 agatatattt tatttacaaa gattatcaat aaatgaatca attatcatgg gaatttcata
      661 ttaaccattc ttgaagtggc aagattcaat aatttattga ttggtatatt cacatgtatg
      721 caggtgcacc agcaagaact gtgggttggc gtgatcctgg ttttattcat actagcttgt
      781 tgaaagactt atggcccaat caaatgtata catacaagtt atggcacaaa tttcaaaatg
      841 ataccatcat ttggagcgag acgtaccagt ttaaatcatc tccgtttcca ggttaacatt
      901 ctctacgacg tgttattatt tttggtgaca tgggaaaggt ttgtacttta tcatccaaat
      961 tgtgttattt taatagaaaa atcaatttct tgcgttattt atgtgaagtc aatgcaggat
     1021 aaggctgacc gatccaacaa atacaataac tttccacctg gatcccttaa tactacaaag
     1081 caactcatcg atgaattgga aagcttcgat attctccata tcggagatat ttgctatgca
     1141 aatgggagta ggttctgagt aaccaaacca ccacatatca tccaatagcg ttccaggtac
     1201 atttcttatg agatgtatag agaatgggga atttgccatc ttttcattgg gattgccatt
     1261 attatcaagt gaaaatgcaa attattgagt tcacatttgt gttcttagtc ttcttataat
     1321 aaggctaatt taaatctaca agttaatggt atccatgttt tatttactgc tctaattcta
     1381 tttaataaaa tattttgcct ttcttacctt ttttataaca ttttttcaaa ttctttttag
     1441 ttcattttca tttgagaaat cttttactag aaaccttgaa agaaacagcg catgaaagta
     1501 acaaagaagg aaggatcttg aatgtctcat cgcgtagtga aggaattcat ttcgacgaga
     1561 ttgacagtaa aacttgtaaa ctacaagtac ttgattttat ccaaatatcg gctattgccc
     1621 aaataaatta tcagttttca gtagaaggat taccaataca tcttccacat ctt
//
LOCUS       XR_011757263            2909 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive purple
            acid phosphatase 1 (LOC139840157), transcript variant X12,
            misc_RNA.
ACCESSION   XR_011757263
VERSION     XR_011757263.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2909
                     /gene="LOC139840157"
                     /note="probable inactive purple acid phosphatase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840157"
     misc_RNA        1..2909
                     /gene="LOC139840157"
                     /product="probable inactive purple acid phosphatase 1,
                     transcript variant X12"
                     /db_xref="GeneID:139840157"
ORIGIN      
        1 tttgtttaat ttcgtttttg cacagatcta gggcatattt tttgtgatta ttaaactatt
       61 ttgtaatttt aggttttaat tttgttgcga tgtttatatt tttacatgca ttttcgattt
      121 taatgcttat taatgttgaa ttgatagcta aattttagtt gttttagttg aattgtgatc
      181 gatgtgtaat tgattgttgt tatataattg tttttaaaaa tttaatttgt tcttgttagt
      241 tgtttcgatg attataattc atccagcact tgtgttgtga tgaatactga ttgaatttat
      301 tatgaacaac caattgtttt attcttctac tttctatatt ttcggttgct gttacagttt
      361 tggagtatga tataaatgga gtatcaacaa taaagatgag tttgcaggtg ttcttatgcc
      421 ggaagtgagc tacttctctg ttaaagatgc aatatatttt atatatagta attttatata
      481 atctgcaata tatttgccat tagatcagat tgcttgaaag ttgatattct gctttgctaa
      541 tactgcggtt ctatgctgga acattgactt tggaccacaa tagcatgtgt ggtgtgtaaa
      601 agatatattt tatttacaaa gattatcaat aaatgaatca attatcatgg gaatttcata
      661 ttaaccattc ttgaagtggc aagattcaat aatttattga ttggtatatt cacatgtatg
      721 caggtgcacc agcaagaact gtgggttggc gtgatcctgg ttttattcat actagcttgt
      781 tgaaagactt atggcccaat caaatgtata catacaagtt atggcacaaa tttcaaaatg
      841 ataccatcat ttggagcgag acgtaccagt ttaaatcatc tccgtttcca ggataaggct
      901 gaccgatcca acaaatacaa taactttcca cctggatccc ttaatactac aaagcaactc
      961 atcgatgaat tggaaagctt cgatattctc catatcggag atatttgcta tgcaaatggg
     1021 tatctttcac aatgggatca atttctcctt tccaaccagt tgtatcagtt gtactgtata
     1081 taaattctag gagttcgact ttgaccagaa tcctacaacc ttttacattt acttaatttt
     1141 ttaattggcg tctaagttat tccttgtttt aattctacga aaattttatg tggttatgga
     1201 ccatttctca aagtcaaaat tatttttata gcattaagaa tttttaattt aatatgcttg
     1261 acctcaaaag tcaaatcaac tgttaatctt gaataactga tttggagtta ttacactcaa
     1321 acttattact ttcaaagatc agatgaaatc aagaaacttt ttgaaagaaa tataatatct
     1381 gtaaaaagta aattgatata tgtttgactc caaaagtcaa actttgtctc ttaatcttca
     1441 aggtctagaa tattaatctt ggataacctt ataagaataa gatgttgtcg tatgatttga
     1501 taataattaa ttgaatgtta agtgtttata taagatgtat gttattagta gtaatttcta
     1561 aaataagaag aattttacaa tattatttga cacaaagata catcgaggtg tcatgtgcga
     1621 ttacattata accttgttat aactttatta actggtaatc tcaactagca caaatggctg
     1681 tcgaatccaa ggttttgaac aagatttttt tttttgtttt gttttttttt tgtattaagc
     1741 aggttagttc tttttatgca caacttatat ggtatgacct tggggtggta aaatgaatgg
     1801 gatgggttgg gttgtcgctc aaaacctatt gaggaaattt cgtgtttgaa acacgaagaa
     1861 tggtcattga agaagtttga aacacgaagc tatatgagca tgtacagtca cctaaagcat
     1921 gatctctgat ctgatatcca gctcaaccaa tcgatctttt ttaacatttt tggtagaaac
     1981 tataataata ctaatctaca agactcaaca gttttttcgt tttgacgcag gagtaggttc
     2041 tgagtaacca aaccaccaca tatcatccaa tagcgttcca ggatgaaaca gttggagcac
     2101 ctaacatggt gattatagtt gaagaagcga ataaggttat taattttaaa ctaatgaaaa
     2161 cattccaagt tttcctaaac tctaggtcgg gtaagacagg taacgggtaa aaatgagtga
     2221 atctcaagta ctgaaatata ggtattgaac aactactaaa tgtcactaat attcatggtg
     2281 catacataaa cttatatact gattataaac aatacttatg ggatgtgata tgataatagc
     2341 agagtttaaa gcttcaatat gattagtgta caaaatgata agaaccataa aattatttat
     2401 agatagcgct gaaaaggttg gtgtttttgc aggtacattt cttatgagat gtatagagaa
     2461 tggggaattt gccatctttt cattgggatt gccattatta tcaagtgaaa atgcaaatta
     2521 ttgagttcac atttgtgttc ttagtcttct tataataagg ctaatttaaa tctacaagtt
     2581 aatggtatcc atgttttatt tactgctcta attctattta ataaaatatt ttgcctttct
     2641 tacctttttt ataacatttt ttcaaattct ttttagttca ttttcatttg agaaatcttt
     2701 tactagaaac cttgaaagaa acagcgcatg aaagtaacaa agaaggaagg atcttgaatg
     2761 tctcatcgcg tagtgaagga attcatttcg acgagattga cagtaaaact tgtaaactac
     2821 aagtacttga ttttatccaa atatcggcta ttgcccaaat aaattatcag ttttcagtag
     2881 aaggattacc aatacatctt ccacatctt
//
LOCUS       XM_071830382            1914 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamyl-tRNA(Gln)
            amidotransferase subunit A, chloroplastic/mitochondrial
            (LOC139840158), mRNA.
ACCESSION   XM_071830382
VERSION     XM_071830382.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1914
                     /gene="LOC139840158"
                     /note="glutamyl-tRNA(Gln) amidotransferase subunit A,
                     chloroplastic/mitochondrial; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840158"
     CDS             72..1658
                     /gene="LOC139840158"
                     /codon_start=1
                     /product="glutamyl-tRNA(Gln) amidotransferase subunit A,
                     chloroplastic/mitochondrial"
                     /protein_id="XP_071686483.1"
                     /db_xref="GeneID:139840158"
                     /translation="MLSSIQNPRILLRHCRHSKPHNHHRPKSFHVTSQIQTIQKSILS
                     REKTTRQYAEEFLTRIRLTDPHLKSFLHVSETVLNEADEIDRKIDRNENVGPLAGVFV
                     AVKDNICTADMPSTAGSRLLENYRPPYDATAVRKVKECGGIVVGKTNLDEFGMGSTTE
                     GSAYQVTANPWDLECVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPASFCGVVGLK
                     PTYGRVSRYGLVAYASSLDVIGCFGSSVADAGILLQTICGHDKLDATSSKREVNNFTP
                     QFIAKDYFNSQPLKGLRVGVIRETLGDGVDKEVVSSIRGAISHLEELGSTVTEVSLPS
                     FSLGLPAYYVLASSESSSNLSRYDGIRYGNQIDSDELSSLYGGSRANGFGPEVKRRIL
                     MGTYALSAGYYDAYYKRAQQVRTVVQKSFKTALDEHDILISPAAPSAAYKIGEKKNDP
                     LAMYAGDIMTVNVNLAGLPALVLPCGFVQNGTSKLPVGFQIIGAAFDEEKLLRVGHIF
                     EQTLQGCSFIPPLIADEFKC"
     misc_feature    183..1601
                     /gene="LOC139840158"
                     /note="Region: Amidase; cl18951"
                     /db_xref="CDD:450241"
ORIGIN      
        1 tgtgtttctg ttcctcttat aaaaaaaaaa aaaaaattaa aaaattaaaa gaaaaaaaga
       61 agaaaaaaga aatgctatct tcaatccaaa accctcgcat ccttctccgt cactgccgtc
      121 attcaaaacc ccacaaccac caccgaccta aatcattcca cgtcacctcc caaatacaaa
      181 caatccaaaa atcaatcctt tcccgcgaaa aaacaacccg ccaatacgct gaagaattct
      241 tgacccgaat ccgactcacc gacccacatc tcaaaagctt ccttcacgtt tcagaaaccg
      301 tattaaacga agctgatgaa attgaccgta agattgaccg gaatgaaaat gtgggcccac
      361 ttgccggagt ctttgttgct gttaaagaca acatttgtac agctgacatg ccgtcaactg
      421 ctggatcgag attgttggag aattatcggc cgccgtacga tgcgacggcg gttaggaagg
      481 tgaaagaatg cggcggaatt gttgttggga aaactaattt ggatgaattt ggtatgggga
      541 gtactactga aggttcagct tatcaggtta ctgcaaatcc atgggatctt gaatgtgtac
      601 caggtggttc atcgggtggc tcagcggcgg ctgtttccgc caggcagtgt gtggtgtcat
      661 taggaagcga tactggtgga agtgtgagac aaccggcttc gttttgtggt gttgtaggac
      721 taaagccgac gtatggtcgt gtttcacggt acgggctggt ggcgtatgca tcatcattag
      781 acgttattgg ttgttttggc tcatcagttg ctgatgctgg aattctccta caaacaattt
      841 gtggtcatga taaacttgat gccactagta gcaagcggga ggttaataac ttcacaccac
      901 agtttattgc caaagattat tttaattcac aacctttaaa aggactacgg gttggtgtaa
      961 ttcgtgaaac tcttggggat ggtgttgata aggaggttgt ttcatcgatt cgtggtgcta
     1021 tttctcatct cgaagagtta ggatctactg tcacagaggt ttcattgcca tcattctcac
     1081 tcggattacc agcttactat gttcttgctt catcagaatc ttcttcaaac ttgtcacgat
     1141 atgatggtat taggtatggt aaccaaattg attctgatga gttgagttcc ctttatgggg
     1201 gttctcgtgc taacggtttt ggtccagagg taaaaagaag aattttgatg ggtacatatg
     1261 ccctttcagc tggttattac gatgcttatt acaagcgagc acaacaggtg aggacagtag
     1321 tccaaaagag cttcaagaca gcacttgacg aacatgatat tctcatttca cctgcagctc
     1381 catctgcggc ttataaaatt ggtgaaaaga agaacgatcc gctagcaatg tatgccgggg
     1441 atatcatgac cgtgaatgtg aacttagctg gattgccagc attggttttg ccatgtgggt
     1501 ttgttcaaaa tggaacatcc aaacttcctg ttggctttca aataattggt gccgcattcg
     1561 atgaggaaaa attacttaga gtggggcata tatttgagca aacgcttcaa ggttgcagct
     1621 ttatcccacc gctaatagca gatgaattca aatgctagca ttagtggatc attcacgtca
     1681 tcattgttga agaattttgg gtgagttaat ggcagctgta acaaatacct tagttatttt
     1741 tgattgcatc gaataggttt agacataagg agatgctcaa agatgccgaa aacttcatgg
     1801 ctctttaaat gtagattatt tggtatgtat tcattcaaaa atcgattgaa ttaggaaaaa
     1861 tctctgctct gatatacctt ctgtcccaat tttgtcagta caagagccaa agta
//
LOCUS       XM_071830383            2956 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent Clp protease
            ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
            (LOC139840159), mRNA.
ACCESSION   XM_071830383
VERSION     XM_071830383.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2956
                     /gene="LOC139840159"
                     /note="ATP-dependent Clp protease ATP-binding subunit ClpA
                     homolog CD4B, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 44
                     Proteins"
                     /db_xref="GeneID:139840159"
     CDS             138..2912
                     /gene="LOC139840159"
                     /codon_start=1
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA homolog CD4B, chloroplastic-like"
                     /protein_id="XP_071686484.1"
                     /db_xref="GeneID:139840159"
                     /translation="MAGALIQSTSFPSTVAGENKIRSKRSNRTKGEVKMMYSLQTPPM
                     TVRSFSGLRGTNALDNLVKRGQDFHSKVAAATSVRKAKPSRIVPKAMFERFTEKAIKV
                     IMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRG
                     SGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLG
                     ADPNNIRTQVIRMVGESAEAVGAGVGGGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVG
                     RQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITL
                     DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL
                     KPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERY
                     EIHHKLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL
                     EKDLRQITKEKNEAVRGQDFEKAGELRDREMDLKTQISALIDKNKEMSKAETEAGEEG
                     PTVTEMDIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRR
                     ARVGLKNPNRPIASFIFSGPTGVGKSELAKALATYYFGSEEAMIRLDMSEFMERHTVS
                     KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS
                     KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNKIKSLVTEELKQYF
                     RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKNKEIELQVTERFRDRVVEEG
                     YNPSYGARPLRRAIMRLLEDSMAEKMLSRDIKEGDSVIVDVDGDGNVTVLNGSSGAPP
                     PEALPEPIEV"
     misc_feature    408..2855
                     /gene="LOC139840159"
                     /note="Clp protease ATP binding subunit; Region: clpC;
                     CHL00095"
                     /db_xref="CDD:214361"
ORIGIN      
        1 tatatatata aaccgacaaa ctgttatcat tcacatttct acaatcaacg gacctcaata
       61 acagaggtcc tgaaatatta ttgcgcttct gttattttta actagtaatt cactgattca
      121 ggtcattaat tgcaatcatg gctggggctc taattcagtc tactagcttt ccttcaacgg
      181 ttgctggtga aaacaagatc cgttcaaaaa gatctaacag aacaaaaggg gaagtcaaga
      241 tgatgtatag cttacaaact cctccaatga cagtaagatc tttctctggt ttacgtggaa
      301 ccaatgcatt agacaacttg gtcaaaaggg gtcaagattt tcattcaaag gttgcagctg
      361 ccacttccgt tagaaaagca aagccatctc gaatcgtgcc aaaagccatg tttgagcggt
      421 ttactgagaa agctattaaa gttattatgc ttgcacaaga agaggcaaga cggcttggtc
      481 acaactttgt gggtaccgag cagattttgt tgggtcttat tggtgaaggc actggcattg
      541 cagcaaaggt gcttaagtca atgggaatta atttgaaaga tgcaagagtc gaggtagaga
      601 agattattgg taggggaagt ggatttgttg ctgttgagat cccgtttaca ccacgtgcaa
      661 agcgtgtttt ggaactttcg ttagaggagg ctcgtcaact tggtcataat tatattggat
      721 cagagcactt gcttcttggt ttgcttcgtg agggtgaagg tgtagcagct cgcgttcttg
      781 aaaatttagg agctgaccca aataacattc gcacacaggt tatcagaatg gttggtgaga
      841 gtgcagaagc tgtaggtgct ggagttggtg gtggtagctc taacaataag atgccaacac
      901 ttgaagaata tggaactaac ttaacgaagc ttgcagaaga gggtaagcta gatcctgttg
      961 ttggaaggca accacaaatc gaacgagtta ctcaaatttt gggcagacgt acgaaaaaca
     1021 atccctgcct tatcggagaa cctggtgtgg gcaagacagc tatagcagaa ggccttgctc
     1081 aaagaattgc aaatggtgat gttccagaaa ctatagaggg gaaaaaggtg ataactctag
     1141 atatgggtct tcttgtggcg ggcacaaagt accgcggaga atttgaagaa agattaaaga
     1201 aattaatgga ggaaattaag caaagtgatg agattattct atttattgat gaggttcata
     1261 ctcttattgg agccggagcc gcagaggggg ctattgatgc tgctaacatt ttgaagccag
     1321 ctcttgctag aggtgaatta cagtgtattg gtgctacaac actggatgaa tatcgtaagc
     1381 atattgagaa ggacccagca cttgagagac gattccaacc tgtaaaggta cccgagccaa
     1441 cagttgatga gacaatacag attttgaaag ggcttcgtga gcgatatgaa atccatcata
     1501 agcttcgtta cactgatgaa tcattagttg ctgcagctca gttatcatac cagtacataa
     1561 gtgaccgttt tcttcctgat aaagcaatcg atttgatcga tgaagccggt tcccgtgtcc
     1621 gtcttcgtca cgcacaactc ccagaagaag cccgagagct tgaaaaagac cttcgacaga
     1681 taaccaaaga aaagaacgaa gcagttcggg gtcaagattt cgaaaaggcc ggggaattgc
     1741 gggatagaga aatggatctt aaaactcaga tctcagcact cattgataaa aacaaagaga
     1801 tgagcaaagc agaaaccgag gcaggagagg agggtcccac cgtaacagag atggatattc
     1861 agcacatcgt atcttcctgg accggcatac cagtggaaaa agtatccagt gatgaatctg
     1921 accgtcttct aaaaatggaa gaaactcttc acacaagaat catcggtcaa gatgaagccg
     1981 tcaaagccat aagccgagcc attcgccggg cccgcgttgg tcttaaaaac cctaaccgcc
     2041 ccattgccag cttcatattt tccgggccca caggagttgg aaaatctgaa cttgctaaag
     2101 ccctagccac gtactacttt gggtccgaag aagccatgat tcggctagat atgagtgagt
     2161 tcatggagag acacaccgtc tctaaactca tcggttcacc gcccggttac gtcggctaca
     2221 ccgaaggcgg tcagttaacc gaggcggtcc gtcgccgccc ttacaccgtg gtcctattcg
     2281 acgaaatcga aaaagctcat ccggatgtgt tcaacatgat gcttcaaatt cttgaagacg
     2341 gaaggttgac cgacagcaaa ggacgaacgg ttgactttaa aaacacgctt ttgattatga
     2401 catcgaatgt cggtagtagt gttattgaaa aaggtggccg aagaatcggg tttgaccttg
     2461 actacgatga aaaggacagc agctataata aaattaaaag cttggtgacg gaagaattaa
     2521 aacagtattt tagacccgag ttcttgaaca gattagatga aatgatcgtg ttcagacagt
     2581 tgactaaatt ggaagtcaaa gagattgctg acatcatgtt gaaggaagtt tttgacaggt
     2641 tgaaaaataa agaaatcgag cttcaagtaa ctgagagatt tagagatcgg gttgttgaag
     2701 aaggatataa tccaagttat ggtgctaggc cattaagaag agccatcatg aggcttctag
     2761 aagatagtat ggctgagaag atgctttcaa gggatattaa ggagggcgat tcggtaattg
     2821 tggacgttga tggtgacgga aatgtgacag ttcttaacgg cagcagtggt gctccgccac
     2881 cagaggcttt gcctgaacca attgaggtct aaattgcgct caaggtttgt tgtttgtatt
     2941 gtgatgtgtt taattt
//
LOCUS       XM_071830384            2639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CDPK-related kinase 7-like
            (LOC139840160), mRNA.
ACCESSION   XM_071830384
VERSION     XM_071830384.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2639
                     /gene="LOC139840160"
                     /note="CDPK-related kinase 7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 56
                     Proteins"
                     /db_xref="GeneID:139840160"
     CDS             464..2197
                     /gene="LOC139840160"
                     /codon_start=1
                     /product="CDPK-related kinase 7-like"
                     /protein_id="XP_071686485.1"
                     /db_xref="GeneID:139840160"
                     /translation="MGLCQGKPNQTPESQLENDDFPNEIEPRTSNSTGKSSFPYYSPS
                     PFHNSSAFKNSPANSSIVSTPLRIFKRSFAPPSPAKHIRSLLARRHGSIKPNEASIPE
                     GKEFEVGLDKNFGYSKQLLSHYELGEEVGRGHFGYTCTAKGKKGSMKGHDVAVKVIPK
                     SKLTTVIAIEDARREVKILKALTGHDNLVQFYDAYEDEDNVYIVMELCKGGELLDRIL
                     ARGGKYSEEDAKAVMVQILSVTAYCHLQGVVHRDLKPENFLFTSKDEHSLLKAIDFGL
                     SDYVKPDERLNDIVGSSYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWVRTES
                     GIFRAVLKADPDFDETPWPSLSTDAVDFVKRLLNKDYRKRLTASQALSHPWLANYHDV
                     RIPLDMIIYKTVKAYISSSPLRKAALGAVAKTLTITELGYLRDQFMSLGPNRSGFISM
                     QNFKSALMKNCTDAVKDSRVLDFVHTMSSLQYKKFDFEEFGAAAISIHQLEAMENWEQ
                     VARRAYELFEKDGNHPIMIEELASELGLSPSIPVHVVLQDWIRHADGKLSFLGFIRLL
                     HGASSRAFQKA"
     misc_feature    830..1618
                     /gene="LOC139840160"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; Region: STKc_CAMK; cd05117"
                     /db_xref="CDD:270687"
     misc_feature    order(851..865,875..877,923..925,929..931,1028..1030,
                     1076..1087,1097..1099,1103..1105,1214..1219,1223..1225,
                     1229..1234,1238..1240,1277..1282,1289..1291,1331..1345,
                     1349..1351)
                     /gene="LOC139840160"
                     /note="active site"
                     /db_xref="CDD:270687"
     misc_feature    order(851..862,875..877,923..925,929..931,1028..1030,
                     1076..1087,1097..1099,1229..1234,1238..1240,1277..1282)
                     /gene="LOC139840160"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(863..865,1097..1099,1103..1105,1214..1219,
                     1223..1225,1229..1231,1289..1291,1331..1345,1349..1351)
                     /gene="LOC139840160"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(1277..1303,1331..1345)
                     /gene="LOC139840160"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270687"
ORIGIN      
        1 tcaagttttt ttcttctatt tctcaacgtc tttttttttc cctttctcac tcaacaatct
       61 ctttataatt attcaggtgg aactcttgct caattatgtc ttctggaatt atttggtcac
      121 ataattattt tcataaattt tgccttgttt taattgggtt ctattaggaa gctaagaatt
      181 cattccaatt tttatgggcg tttactgaat ttcaaagaaa ttggagtgtt gattcttaaa
      241 gttactttct tgacttcagt tcatcaaatt ttgctatttt gctcaatgaa ttacatgttt
      301 cttgaacctt gaacctcata aaagcctctt gctttaatct tattgtgtaa atttacacaa
      361 tccaatatat attttactct tttgttcaat aaaatagcct tttttttctt ggaccttaca
      421 caattataaa actccattac tttgatcttt tgtttgtgaa tccatgggac tttgtcaagg
      481 aaaacccaat caaacccctg aaagccaact ggaaaatgac gatttcccaa atgaaatcga
      541 accaagaaca tcgaattcaa ccgggaaatc atcatttcca tactacagcc ctagcccctt
      601 tcacaacagt agtgctttca agaactctcc tgcgaattcg agtatcgttt cgacccctct
      661 tcgtatattt aagcgctctt tcgcaccacc atcgcccgcg aagcatattc ggtctttgct
      721 tgcaagaaga catgggtcta ttaagcctaa tgaagcctca attcctgaag gaaaggaatt
      781 tgaggttgga ttagataaga attttgggta ttctaagcaa ctattaagtc attatgagct
      841 tggagaggaa gtgggtaggg gacattttgg gtatacttgt actgcaaagg gaaagaaagg
      901 tagtatgaaa ggccatgatg ttgctgttaa agttattccc aaatcaaagt tgacaacggt
      961 aattgctatt gaagatgcaa ggagagaagt gaaaatatta aaggctttaa cggggcatga
     1021 caatttagtt cagttttatg atgcttatga ggatgaagac aatgtctata tagttatgga
     1081 gttatgtaaa ggaggtgaac tattagatcg gatacttgcc aggggtggaa aatactccga
     1141 agaagatgca aaggctgtta tggtccaaat tttaagtgtt actgcatatt gtcatcttca
     1201 aggagtggtt catcgcgacc tcaagcccga gaattttttg tttacatcta aggacgaaca
     1261 ttcactcctt aaagccattg actttggact ctctgactat gtaaagccag atgagaggtt
     1321 aaatgatata gttggaagtt catattatgt agctcctgag gttctacata gatcatatgg
     1381 gacagaagct gatatgtgga gtattggtgt tattgcttat attcttcttt gtggaagtcg
     1441 gcccttttgg gtccggaccg agtctggaat ttttcgggcc gtcctcaagg ctgacccaga
     1501 ttttgacgaa accccgtggc cttctttgtc aaccgacgcg gttgactttg tcaaaaggtt
     1561 attgaacaaa gattaccgca agagactgac tgcttctcaa gctctaagtc atccatggtt
     1621 ggccaattat catgacgtga gaataccgtt ggacatgata atctacaaga ctgtaaaagc
     1681 gtatatatct tcctctcctt taagaaaagc cgctttaggg gctgttgcga agactttgac
     1741 aattacagag ctaggttacc ttcgtgacca attcatgtcc ctaggtccaa acagaagtgg
     1801 atttatttcc atgcagaact tcaaatcggc gttgatgaag aactgtactg atgccgtaaa
     1861 ggactcacgt gtgctggatt ttgtacatac gatgagttct cttcaatata agaagtttga
     1921 ctttgaggaa tttggagcag cagccattag cattcatcag cttgaagcaa tggaaaactg
     1981 ggaacaagtc gcacgtcgtg cctatgagct ctttgagaag gacggaaacc atcctatcat
     2041 gattgaagaa cttgcctcgg aacttggact tagcccatca ataccagttc atgtagttct
     2101 tcaagattgg attagacatg cggacggaaa gctgagtttc ttggggttca tccgacttct
     2161 acacggagcc tcatctcgtg catttcaaaa ggcttgaata tcaagccaaa tgatacttct
     2221 tatgccatca taaaaccgtc ttgatgatac aaattccttc aagaaagagg tgataatttt
     2281 ttatacatga aacattcata agtttcattt actctgaaca ccattttcat ccaactcgat
     2341 catatgccag gttatgccga acaagtctca ttttgtttgt ccaaatccta gaaaattgta
     2401 caaaagtagg tctcactgtg tttagcttag aaaccgtgta atgctggggc ggatcctaaa
     2461 atttgagtac tctgactaga tcgtcttttt ttttcttctg taatttacac ttgatctcca
     2521 aatcatttgt tcttcatttt accctcaaaa ataaatttca agttccgcca ttggtgctat
     2581 ggttgagtga gttttgtgtt tttattcttc ctttactttc ttgtgttctc catattatg
//
LOCUS       XR_011757264            1616 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840161), transcript variant X1, ncRNA.
ACCESSION   XR_011757264
VERSION     XR_011757264.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1616
                     /gene="LOC139840161"
                     /note="uncharacterized LOC139840161; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840161"
     ncRNA           1..1616
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840161"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840161"
ORIGIN      
        1 gggtaacacc taatttggct tgcaaaagtg cccgtcagaa accattgcag gatgaagatc
       61 atagaaacct ggcgattttt caattggatg ttttcataac aagtgtttga tggtttacac
      121 aattccagat ccacatgtca agggaacttt cggagtttta aactaaatgt ttaatgagaa
      181 gctgtagaga ggcatcgtgc tttatgttga ttgttggtag ccatggttat gggtcaatca
      241 aaagattcat tcgaagatgc atatgcaatt ttcggaaaca aaatctccac ttagttcatt
      301 tatcactaat ggtaacatct gtatctttaa ttgttgtatg attaatcttc ttgtcagtca
      361 taggtaatac agcctgaatc ataaattagt tggtagatat tgaaggttag tacttatttt
      421 gtagtatcca cacgacactt atagtaaata gtactttcaa actgttgatt catgaagtca
      481 gatataaatt tgaagtgtat tagataattg gcctaatcat aaggcttaga atatcaaacc
      541 atggaaaaat attaatacgt attggatcaa gtacatctgc actaatatat caacccacct
      601 gaagctaatt agtctttcta ataaaagatt ttgaataatc acgtagataa ctaaatatcg
      661 tagatataaa tatagtttta gtacacaaga ggtaatattc ataaaaaata tgagaactta
      721 taagttatag ttggacaaat tcttttgtac tgactcataa aactttcgta gaaattctgc
      781 atatgtattt atttatgttg ctggttttgt tataaatgtg tcatacatga tcaatgtttt
      841 aaagccttaa ctaatctttt gaattttagt aagacgtttt agcagagctg gttacttggt
      901 tagcatggtt agaatattgt atgttctaag tttacttaaa tgttttatca gatgtggaaa
      961 aatgagtggg tcgggaaaat ggtaaaatga acctacatca aaataggtat agtttaataa
     1021 agaagattat gtctacccaa ccaacctctt aattcgtctc aaatgtgggt aactgcttgc
     1081 tctagcctat acgtttgagt tgttaggcat gcctcacaac aaataaaaga ttgtgcatct
     1141 gactggaatc aagcttaata tggccaattg ggacgatgac ttaatctggg ggccaaacaa
     1201 taatgcttaa ttacaataaa tcatttaata cagtcataat aaattaatct aatacatatt
     1261 acatcgttgg aagatatcta aagttataat gttgatacat gcgcaacatg taaacggtct
     1321 accaaaacgt tgagaagcca gaatggacag aagaacagtg tttctcaaaa gtgcctcatt
     1381 acaataatgt tatctacttc tacaatattt gatgattttt agaatgtgag ctttttatgc
     1441 ctctttcttg tacgtgtatt tagctctgat gagcataatg agtgggtcag tgtgttggat
     1501 aaataggtct gatcatattt gttcgtaagt atttccatat tcttcaaaac ttaaattaaa
     1561 ataaactaaa ttttcatcct ttacttccag gtgaatacac attatttttt taccaa
//
LOCUS       XR_011757265            2179 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840161), transcript variant X2, ncRNA.
ACCESSION   XR_011757265
VERSION     XR_011757265.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2179
                     /gene="LOC139840161"
                     /note="uncharacterized LOC139840161; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840161"
     ncRNA           1..2179
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840161"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840161"
ORIGIN      
        1 atctaaaaac cctaatcgtt ctttcattga aatctctcgg acgatctctc tcattagaca
       61 aattatacat ctttcactac atggaattat gaatcaaatg atctcatctc cggtgatttg
      121 atatcgttac aatatgttaa atgattttct caaattattt tcaaagtttt tacccaaaaa
      181 tttgttcaca gatttcgatt ctgtcaattg attgtctcat ataatcgcat gtcatcaata
      241 atcgtttctg cttgtgttct aaaatatgtt catctaaaat atctcatcta taaacaattt
      301 ttgccctaaa atatgttcaa ggatttcgca gaatcgttcg tggatttcta catgtaatcg
      361 atcatgtaca tgaatcgaca ctataggtta tattctttga agaaacggct atcaatgtta
      421 ttttgtgtga catgagggtg gtgttgatct tttgaaaaag gttgaacgtc ttttcaggtg
      481 ttacatagcc atttgaaacg actaaatgat ggaacatggt cagaaaatcg agaatataat
      541 tttagggatg attttagggt tcaaggtcgg ggaagaaaaa gccgttacaa agatcacgtt
      601 agaagacccg caggatgaag atcatagaaa cctggcgatt tttcaattgg atgttttcat
      661 aacaagtgtt tgatggttta cacaattcca gatccacatg tcaagggaac tttcggagtt
      721 ttaaactaaa tgtttaatga gaagctgtag agaggcatcg tgctttatgt tgattgttgg
      781 tagccatggt tatgggtcaa tcaaaagatt cattcgaaga tgcatatgca attttcggaa
      841 acaaaatctc cacttagttc atttatcact aatggtaaca tctgtatctt taattgttgt
      901 atgattaatc ttcttgtcag tcataggtaa tacagcctga atcataaatt agttggtaga
      961 tattgaaggt tagtacttat tttgtagtat ccacacgaca cttatagtaa atagtacttt
     1021 caaactgttg attcatgaag tcagatataa atttgaagtg tattagataa ttggcctaat
     1081 cataaggctt agaatatcaa accatggaaa aatattaata cgtattggat caagtacatc
     1141 tgcactaata tatcaaccca cctgaagcta attagtcttt ctaataaaag attttgaata
     1201 atcacgtaga taactaaata tcgtagatat aaatatagtt ttagtacaca agaggtaata
     1261 ttcataaaaa atatgagaac ttataagtta tagttggaca aattcttttg tactgactca
     1321 taaaactttc gtagaaattc tgcatatgta tttatttatg ttgctggttt tgttataaat
     1381 gtgtcataca tgatcaatgt tttaaagcct taactaatct tttgaatttt agtaagacgt
     1441 tttagcagag ctggttactt ggttagcatg gttagaatat tgtatgttct aagtttactt
     1501 aaatgtttta tcagatgtgg aaaaatgagt gggtcgggaa aatggtaaaa tgaacctaca
     1561 tcaaaatagg tatagtttaa taaagaagat tatgtctacc caaccaacct cttaattcgt
     1621 ctcaaatgtg ggtaactgct tgctctagcc tatacgtttg agttgttagg catgcctcac
     1681 aacaaataaa agattgtgca tctgactgga atcaagctta atatggccaa ttgggacgat
     1741 gacttaatct gggggccaaa caataatgct taattacaat aaatcattta atacagtcat
     1801 aataaattaa tctaatacat attacatcgt tggaagatat ctaaagttat aatgttgata
     1861 catgcgcaac atgtaaacgg tctaccaaaa cgttgagaag ccagaatgga cagaagaaca
     1921 gtgtttctca aaagtgcctc attacaataa tgttatctac ttctacaata tttgatgatt
     1981 tttagaatgt gagcttttta tgcctctttc ttgtacgtgt atttagctct gatgagcata
     2041 atgagtgggt cagtgtgttg gataaatagg tctgatcata tttgttcgta agtatttcca
     2101 tattcttcaa aacttaaatt aaaataaact aaattttcat cctttacttc caggtgaata
     2161 cacattattt ttttaccaa
//
LOCUS       XR_011757266            2088 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840161), transcript variant X3, ncRNA.
ACCESSION   XR_011757266
VERSION     XR_011757266.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2088
                     /gene="LOC139840161"
                     /note="uncharacterized LOC139840161; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840161"
     ncRNA           1..2088
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840161"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840161"
ORIGIN      
        1 atctaaaaac cctaatcgtt ctttcattga aatctctcgg acgatctctc tcattagaca
       61 aattatacat ctttcactac atggaattat gaatcaaatg atctcatctc cggtgatttg
      121 atatcgttac aatatgttaa atgattttct caaattattt tcaaagtttt tacccaaaaa
      181 tttgttcaca gatttcgatt ctgtcaattg attgtctcat ataatcgcat gtcatcaata
      241 atcgtttctg cttgtgttct aaaatatgtt catctaaaat atctcatcta taaacaattt
      301 ttgccctaaa atatgttcaa ggatttcgca gaatcgttcg tggatttcta catgtaatcg
      361 atcatgtaca tgaatcgaca ctataggtgt tacatagcca tttgaaacga ctaaatgatg
      421 gaacatggtc agaaaatcga gaatataatt ttagggatga ttttagggtt caaggtcggg
      481 gaagaaaaag ccgttacaaa gatcacgtta gaagacccgc aggatgaaga tcatagaaac
      541 ctggcgattt ttcaattgga tgttttcata acaagtgttt gatggtttac acaattccag
      601 atccacatgt caagggaact ttcggagttt taaactaaat gtttaatgag aagctgtaga
      661 gaggcatcgt gctttatgtt gattgttggt agccatggtt atgggtcaat caaaagattc
      721 attcgaagat gcatatgcaa ttttcggaaa caaaatctcc acttagttca tttatcacta
      781 atggtaacat ctgtatcttt aattgttgta tgattaatct tcttgtcagt cataggtaat
      841 acagcctgaa tcataaatta gttggtagat attgaaggtt agtacttatt ttgtagtatc
      901 cacacgacac ttatagtaaa tagtactttc aaactgttga ttcatgaagt cagatataaa
      961 tttgaagtgt attagataat tggcctaatc ataaggctta gaatatcaaa ccatggaaaa
     1021 atattaatac gtattggatc aagtacatct gcactaatat atcaacccac ctgaagctaa
     1081 ttagtctttc taataaaaga ttttgaataa tcacgtagat aactaaatat cgtagatata
     1141 aatatagttt tagtacacaa gaggtaatat tcataaaaaa tatgagaact tataagttat
     1201 agttggacaa attcttttgt actgactcat aaaactttcg tagaaattct gcatatgtat
     1261 ttatttatgt tgctggtttt gttataaatg tgtcatacat gatcaatgtt ttaaagcctt
     1321 aactaatctt ttgaatttta gtaagacgtt ttagcagagc tggttacttg gttagcatgg
     1381 ttagaatatt gtatgttcta agtttactta aatgttttat cagatgtgga aaaatgagtg
     1441 ggtcgggaaa atggtaaaat gaacctacat caaaataggt atagtttaat aaagaagatt
     1501 atgtctaccc aaccaacctc ttaattcgtc tcaaatgtgg gtaactgctt gctctagcct
     1561 atacgtttga gttgttaggc atgcctcaca acaaataaaa gattgtgcat ctgactggaa
     1621 tcaagcttaa tatggccaat tgggacgatg acttaatctg ggggccaaac aataatgctt
     1681 aattacaata aatcatttaa tacagtcata ataaattaat ctaatacata ttacatcgtt
     1741 ggaagatatc taaagttata atgttgatac atgcgcaaca tgtaaacggt ctaccaaaac
     1801 gttgagaagc cagaatggac agaagaacag tgtttctcaa aagtgcctca ttacaataat
     1861 gttatctact tctacaatat ttgatgattt ttagaatgtg agctttttat gcctctttct
     1921 tgtacgtgta tttagctctg atgagcataa tgagtgggtc agtgtgttgg ataaataggt
     1981 ctgatcatat ttgttcgtaa gtatttccat attcttcaaa acttaaatta aaataaacta
     2041 aattttcatc ctttacttcc aggtgaatac acattatttt tttaccaa
//
LOCUS       XR_011757267             976 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840161), transcript variant X4, ncRNA.
ACCESSION   XR_011757267
VERSION     XR_011757267.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..976
                     /gene="LOC139840161"
                     /note="uncharacterized LOC139840161; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840161"
     ncRNA           1..976
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840161"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840161"
ORIGIN      
        1 gggtaacacc taatttggct tgcaaaagtg cccgtcagaa accattgcag gatgaagatc
       61 atagaaacct ggcgattttt caattggatg ttttcataac aagtgtttga tggtttacac
      121 aattccagat ccacatgtca agggaacttt cggagtttta aactaaatgt ttaatgagaa
      181 gctgtagaga ggcatcgtgc tttatgttga ttgttggtag ccatggttat gggtcaatca
      241 aaagattcat tcgaagatgc atatgcaatt ttcggaaaca aaatctccac ttagttcatt
      301 tatcactaat gatgtggaaa aatgagtggg tcgggaaaat ggtaaaatga acctacatca
      361 aaataggtat agtttaataa agaagattat gtctacccaa ccaacctctt aattcgtctc
      421 aaatgtgggt aactgcttgc tctagcctat acgtttgagt tgttaggcat gcctcacaac
      481 aaataaaaga ttgtgcatct gactggaatc aagcttaata tggccaattg ggacgatgac
      541 ttaatctggg ggccaaacaa taatgcttaa ttacaataaa tcatttaata cagtcataat
      601 aaattaatct aatacatatt acatcgttgg aagatatcta aagttataat gttgatacat
      661 gcgcaacatg taaacggtct accaaaacgt tgagaagcca gaatggacag aagaacagtg
      721 tttctcaaaa gtgcctcatt acaataatgt tatctacttc tacaatattt gatgattttt
      781 agaatgtgag ctttttatgc ctctttcttg tacgtgtatt tagctctgat gagcataatg
      841 agtgggtcag tgtgttggat aaataggtct gatcatattt gttcgtaagt atttccatat
      901 tcttcaaaac ttaaattaaa ataaactaaa ttttcatcct ttacttccag gtgaatacac
      961 attatttttt taccaa
//
LOCUS       XM_071830385            2711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein neprosin-like
            (LOC139840162), transcript variant X1, mRNA.
ACCESSION   XM_071830385
VERSION     XM_071830385.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2711
                     /gene="LOC139840162"
                     /note="protein neprosin-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 27
                     Proteins"
                     /db_xref="GeneID:139840162"
     CDS             1236..2474
                     /gene="LOC139840162"
                     /codon_start=1
                     /product="protein neprosin-like isoform X1"
                     /protein_id="XP_071686486.1"
                     /db_xref="GeneID:139840162"
                     /translation="MVYCFSFKSTLIFTLVCILLLSVFVCESVPLNETRFKPMEELKK
                     MIRVRTHLKKINKPSVKTIQSPDGDLIDCVVSHLQPAFDHPKLKGQKPLEGPSERPKG
                     HNSSNNEIYETVQLWAELGYCPEGTIPIRRTTEKDVLRASSLRRFGRKIKRGVRHDTM
                     SGGHEHAVAYVNGDEYYGAKANMNVWTPEVTDPYEFSLSQLWVISGSFGNDLNTIEAG
                     WQVSPELYGDGFPRFFTYWTTDEYQATGCYNLLCSGIVQTNNRIAIGAAISPRSFYNG
                     EQFDISVMIWKDPKDGHWWLQFGSGEIIGYWPSFLFSHLQKHASMVQFGGEIVNSGSN
                     GYHTSTQMGSGHFPDEGFGKAAYFRNMQVVDWDNSLLPLVNSQLQADKSSCYDIKEGQ
                     NNEWGNYIYYGGPGRNAGCQ"
     misc_feature    1419..1745
                     /gene="LOC139840162"
                     /note="Neprosin activation peptide; Region: Neprosin_AP;
                     pfam14365"
                     /db_xref="CDD:464153"
     misc_feature    1812..2450
                     /gene="LOC139840162"
                     /note="Region: Neprosin; pfam03080"
                     /db_xref="CDD:460797"
ORIGIN      
        1 taataatact caattgttat tctaataata ctcaattagt gtgtgaggat aaaaaagtgt
       61 gtgtgagaat catctcctta aaaaaaaatg aataatgaca ctttataggc taaatatatt
      121 tacaaagagc actatcccct tcttgaagca tgggatcttt ttgaaaagaa tagagaccaa
      181 ataaagttgt gtagaactct acaatcgctt tatcatttgt gttttgtaaa aatatataat
      241 atataatatc ctggtgctta aatttgaagt gcaagaaaac tatgcaacac taatttgtac
      301 ctattgcatc atatatggtg tgcattgttt tggatttaag aattttggct ctaaactaat
      361 tatcacaaga tgatctactc attgacgtgg tgacagaatt ttgatcagtg atcaatgaga
      421 acatcgttgt tgaaagtata gatgagtgaa aggcagtatt ccggacaaca ttttagaatt
      481 aagatatgcc cacaaatacc attttcaact aagaatgaaa gggaaaaaca atgaacagag
      541 cagcattgtc tttttatttt tttaaaaatt aatatacgcc cacataaaca gagcagcatt
      601 gtgtgtcaga ctctgctcta gaaagccgat tgaaatgcta ttacagagtt gtaaatgcca
      661 tcttaagaca tttttatcca aaacacaaac atgttctctc catgtatgct cttaaactat
      721 attactccgt aattattaag tatccttatt attattcata tgaattagta ttagtttcgc
      781 gaagtcattg gttataaaat aagtactgta ctacatacta aaagtatgag taataaacaa
      841 acaattaaat gtaaaaataa aaaataaaaa aattgaccac tgggttgtta atggttttta
      901 aaccccacat ctctaatgga aatgtaggct ggttctgtat gtcagtgccc atgaccgaag
      961 aatcttaaat agaagggaaa aaaaagtaca tttatacatg tcttattgta tctatatctc
     1021 tctccattta aaacaatcac aaactcaact cttgtatttc aaacgttgtg atctggacaa
     1081 aaattaggaa caatccaatt gtttcttgtt cttgttgttt gttttttgtt gatcataata
     1141 atatcttact ctgcatacaa aaacatatta aagtcaagtt agttaagtat aataccacca
     1201 agcatagata ttatttcttt aatatctatg taaacatggt ttattgtttt tctttcaaat
     1261 ccacattaat attcacactt gtttgtatct tgttattgtc tgtttttgtt tgtgaatctg
     1321 ttccactaaa tgaaacaaga tttaagccaa tggaagagtt gaagaagatg ataagagtta
     1381 gaactcattt gaagaagatc aataaacctt cagtcaagac catacagagt cctgatggtg
     1441 atttgataga ttgtgttgtt tctcatcttc aaccagcctt tgatcatcct aaacttaaag
     1501 gacaaaagcc attggaagga ccatctgaga ggccaaaggg ccataactca agtaataatg
     1561 aaatatatga gacagttcaa ctatgggcag aattgggata ttgtccggaa gggactattc
     1621 ctatcagaag aactactgaa aaagacgttt tacgagcgag ttcgttgcga agatttggaa
     1681 gaaagatcaa aagaggtgta agacatgaca ccatgagtgg tgggcacgag catgcagttg
     1741 cttatgtaaa tggagatgag tattatggag ctaaggccaa catgaatgta tggacacctg
     1801 aagttacaga tccgtatgag tttagtcttt cacaattatg ggtcatatcc ggttcatttg
     1861 gcaatgatct caataccatt gaagccggtt ggcaggttag ccctgagtta tacggagacg
     1921 gttttcctag atttttcacc tactggacta ctgatgaata ccaagccacg ggatgttata
     1981 acttgctatg ttcaggaatc gttcaaacaa acaatagaat tgctattggt gcagcaatct
     2041 ctcctaggtc attttacaac ggcgaacaat ttgatatcag tgttatgata tggaaggacc
     2101 ctaaagacgg acattggtgg ctccaatttg ggtctgggga gattatcgga tattggccat
     2161 ctttcttgtt tagtcatttg caaaaacatg caagtatggt acaatttggt ggggagatag
     2221 tgaactcggg atcaaatggt taccacacat caacgcaaat gggtagtggt cattttcccg
     2281 atgaaggttt tggtaaagca gcgtatttta ggaatatgca ggttgttgat tgggacaaca
     2341 gtttgcttcc tttagtaaat tcacaattgc aggctgataa atcaagttgt tatgatataa
     2401 aagaaggcca aaataatgaa tgggggaatt atatttatta tggaggtcca ggaagaaatg
     2461 caggttgtca atagagaaaa ttgcatagta ttattattaa ccttttctcg ttacatgatt
     2521 aattcattcc tagagttagt tagtagatga ttttgatttt ttttactaca aaaagtccct
     2581 tcttatctgt gttagtctaa cagaagtcca ttttatgggg tcgtgtatat atgtattagg
     2641 ggcaactgat tggtgatgta ttatgatttg taaggtatta aactttagtt ttctgagtaa
     2701 tttacaacta a
//
LOCUS       XM_071830386            1947 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein neprosin-like
            (LOC139840162), transcript variant X2, mRNA.
ACCESSION   XM_071830386
VERSION     XM_071830386.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1947
                     /gene="LOC139840162"
                     /note="protein neprosin-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139840162"
     CDS             553..1710
                     /gene="LOC139840162"
                     /codon_start=1
                     /product="protein neprosin-like isoform X2"
                     /protein_id="XP_071686487.1"
                     /db_xref="GeneID:139840162"
                     /translation="MKAMQKAVFKPMEELKKMIRVRTHLKKINKPSVKTIQSPDGDLI
                     DCVVSHLQPAFDHPKLKGQKPLEGPSERPKGHNSSNNEIYETVQLWAELGYCPEGTIP
                     IRRTTEKDVLRASSLRRFGRKIKRGVRHDTMSGGHEHAVAYVNGDEYYGAKANMNVWT
                     PEVTDPYEFSLSQLWVISGSFGNDLNTIEAGWQVSPELYGDGFPRFFTYWTTDEYQAT
                     GCYNLLCSGIVQTNNRIAIGAAISPRSFYNGEQFDISVMIWKDPKDGHWWLQFGSGEI
                     IGYWPSFLFSHLQKHASMVQFGGEIVNSGSNGYHTSTQMGSGHFPDEGFGKAAYFRNM
                     QVVDWDNSLLPLVNSQLQADKSSCYDIKEGQNNEWGNYIYYGGPGRNAGCQ"
     misc_feature    655..981
                     /gene="LOC139840162"
                     /note="Neprosin activation peptide; Region: Neprosin_AP;
                     pfam14365"
                     /db_xref="CDD:464153"
     misc_feature    1048..1686
                     /gene="LOC139840162"
                     /note="Region: Neprosin; pfam03080"
                     /db_xref="CDD:460797"
ORIGIN      
        1 aaaaaattct aaatcctctc aacccattac acaacgtcga tcaaactcaa tcgtcaatca
       61 agcaattcgt ttcgagatga ttcattcaac caattccatc gcagaaatca aatcgatttt
      121 gatatcattt tgcattggta cctttggtta tattgtaagt taagttttgt cccctttcac
      181 cgcatcacac gaagcgaacg attcaagttc ttccagttct tcttatgtta gctttaacga
      241 caaagctcca atgttttggt ccaagttttc acactttgtt gttccaggta ttggaaccac
      301 atcgattcct tggtgatgca ccaagctagt gatagttgag ccgctgtgct acggtatgca
      361 ttgtgatttt ttttacgata tggcgatccg ttctttagag catgttttga agtacgggga
      421 acagaatatc agaaaagccg ttccgttagc tcttggtctc ctatgcattt cgaacccaaa
      481 gaaaataaag cttaaaagtt aaaaagtcac aacagagaca cacctgatgc ttttcaaact
      541 ggagctcaag ctatgaaagc aatgcaaaag gctgtattta agccaatgga agagttgaag
      601 aagatgataa gagttagaac tcatttgaag aagatcaata aaccttcagt caagaccata
      661 cagagtcctg atggtgattt gatagattgt gttgtttctc atcttcaacc agcctttgat
      721 catcctaaac ttaaaggaca aaagccattg gaaggaccat ctgagaggcc aaagggccat
      781 aactcaagta ataatgaaat atatgagaca gttcaactat gggcagaatt gggatattgt
      841 ccggaaggga ctattcctat cagaagaact actgaaaaag acgttttacg agcgagttcg
      901 ttgcgaagat ttggaagaaa gatcaaaaga ggtgtaagac atgacaccat gagtggtggg
      961 cacgagcatg cagttgctta tgtaaatgga gatgagtatt atggagctaa ggccaacatg
     1021 aatgtatgga cacctgaagt tacagatccg tatgagttta gtctttcaca attatgggtc
     1081 atatccggtt catttggcaa tgatctcaat accattgaag ccggttggca ggttagccct
     1141 gagttatacg gagacggttt tcctagattt ttcacctact ggactactga tgaataccaa
     1201 gccacgggat gttataactt gctatgttca ggaatcgttc aaacaaacaa tagaattgct
     1261 attggtgcag caatctctcc taggtcattt tacaacggcg aacaatttga tatcagtgtt
     1321 atgatatgga aggaccctaa agacggacat tggtggctcc aatttgggtc tggggagatt
     1381 atcggatatt ggccatcttt cttgtttagt catttgcaaa aacatgcaag tatggtacaa
     1441 tttggtgggg agatagtgaa ctcgggatca aatggttacc acacatcaac gcaaatgggt
     1501 agtggtcatt ttcccgatga aggttttggt aaagcagcgt attttaggaa tatgcaggtt
     1561 gttgattggg acaacagttt gcttccttta gtaaattcac aattgcaggc tgataaatca
     1621 agttgttatg atataaaaga aggccaaaat aatgaatggg ggaattatat ttattatgga
     1681 ggtccaggaa gaaatgcagg ttgtcaatag agaaaattgc atagtattat tattaacctt
     1741 ttctcgttac atgattaatt cattcctaga gttagttagt agatgatttt gatttttttt
     1801 actacaaaaa gtcccttctt atctgtgtta gtctaacaga agtccatttt atggggtcgt
     1861 gtatatatgt attaggggca actgattggt gatgtattat gatttgtaag gtattaaact
     1921 ttagttttct gagtaattta caactaa
//
LOCUS       XM_071830387             831 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840164), mRNA.
ACCESSION   XM_071830387
VERSION     XM_071830387.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..831
                     /gene="LOC139840164"
                     /note="uncharacterized LOC139840164; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 36
                     Proteins"
                     /db_xref="GeneID:139840164"
     CDS             16..831
                     /gene="LOC139840164"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686488.1"
                     /db_xref="GeneID:139840164"
                     /translation="MVTGASSGLGWDICIDLARYDCRIIAAARRTHNLKVLCDRINNL
                     DRSDGPANQTEAGNNNNVRAVAVQLDVSADGPTIEARVKKAWDAFGRIDVLINNAGIT
                     GTIRSSLDLSEEDWDQAFKINIRGSWLVSKYVGLQMRVHNQGGSIINISSISGVNRCH
                     YHGTVAYASSKAALDTMTKVMAMELGHHKIRVNSIAPGIFKSEITEELFQKKWVKNVT
                     LKTVPLQEFITTNPAMTSLVRYLIHNSSNYVTGNIFIVDGGYSLPGVPIYSAL"
     misc_feature    19..801
                     /gene="LOC139840164"
                     /note="NAD(P)-dependent dehydrogenase, short-chain alcohol
                     dehydrogenase family [Lipid transport and metabolism];
                     Region: FabG; COG1028"
                     /db_xref="CDD:440651"
ORIGIN      
        1 aaagacaaag ttgtgatggt tactggtgca tcctcaggtc ttggttggga catttgtatc
       61 gacttagcca gatatgattg taggatcatt gcagctgcac gtcgaacaca caacctcaaa
      121 gtcttatgtg acagaattaa caatttggat aggtcagatg gtccagcaaa ccaaactgaa
      181 gctgggaaca ataataacgt tcgagcagtt gcagttcaac ttgatgttag cgctgatggt
      241 cctactattg aagcacgtgt taaaaaggct tgggacgctt ttggccgtat tgatgtgttg
      301 atcaacaatg ctggaattac aggtactata agaagttcac tcgatttgtc tgaagaagac
      361 tgggatcaag ccttcaaaat aaacataaga ggatcatggt tggtgtcgaa gtacgttggc
      421 cttcaaatgc gtgttcataa tcaaggagga tctataatca acatctcttc tatttctggt
      481 gttaatcgtt gtcattacca tggaaccgtt gcatacgctt cttcaaaagc agccttagat
      541 actatgacaa aggtaatggc aatggaactt ggacatcata aaattcgggt gaactcaata
      601 gctcctggga tcttcaaatc tgagatcaca gaggaactct tccaaaaaaa atgggttaag
      661 aacgtgactt taaaaaccgt tccgttacaa gaatttatca caactaaccc ggccatgacg
      721 tcattagtta ggtacttaat ccataattca tcaaattatg tgacaggtaa tattttcatt
      781 gtagatggag gttattcctt accaggtgta ccaatttatt cagcactttg a
//
LOCUS       XM_071830388            1861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840165), mRNA.
ACCESSION   XM_071830388
VERSION     XM_071830388.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1861
                     /gene="LOC139840165"
                     /note="uncharacterized LOC139840165; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840165"
     CDS             238..1566
                     /gene="LOC139840165"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686489.1"
                     /db_xref="GeneID:139840165"
                     /translation="MAGYDLDQYEDYEDEAGEYEEDGDEYEEQEKEECPPTREALEYL
                     ELRNKLKEIHRKKMKIGAGSVSANSREKKSKMPYDNFGSFFGPSQPVIAQRVIQESKS
                     LLENPHLAARVSKTTINRGGSSTQAVTKPRPNGNGQPRKVDNYSRPQAKIQMLKNTRD
                     YSFLLSDDAELPVPPKIPPKRVPAPKPEVRPSERQANTNGRKVMNGREERRPVPTSSQ
                     MRPKSGPQSQRPGTASKLTSTSLDSRKQVVRNEGSGQGRPSGHKPLPSKTPLVNKQKV
                     NSTQVARGSIPTGHKPLPSRSPPSVQKRPVEHKRDDRGFSNGNTIRKPVTTSKPQIKQ
                     QSARPPSSSQHKERPQKRPARPFDDDDDDQNAISMIRNMFRYNPNRFRDINDDDDSDM
                     EAGFDDIMQEEKRSARIGAKEDEEELKKIEEEERRERMRKEAKKRKLGHR"
     misc_feature    <694..1305
                     /gene="LOC139840165"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
     misc_feature    <1339..>1467
                     /gene="LOC139840165"
                     /note="SPT2 chromatin protein; Region: SPT2; smart00784"
                     /db_xref="CDD:214818"
ORIGIN      
        1 aatcatcacc ggagataggc caaaatcgag attcttctac aacaaaatca ccgactgtaa
       61 ccgtcatccg atcgtttcgc ttccgttccg attctatcta tacattttaa tcgatcaact
      121 atcaacaact gaatctattg attcttgaac tctcgaaatt gcgaaaatta gggttctttt
      181 tgtctgttta ttgcatcttt catttgccaa gtaggccttt gaagatttaa gagttcaatg
      241 gcaggatatg atttagatca atatgaggat tatgaagatg aagctggtga atatgaagag
      301 gatggtgatg aatatgaaga acaggagaaa gaggaatgcc cgccgacacg ggaagcgttg
      361 gaataccttg aactgaggaa taagttgaag gaaattcata gaaaaaagat gaagataggt
      421 gcaggttctg tctctgccaa ttcaagggag aaaaaaagta aaatgccata tgataatttt
      481 ggatcttttt ttgggccatc acaaccagtt attgctcaaa gagtaattca agaaagcaag
      541 tcgctgttgg agaatccaca tttggcagca agggtttcaa aaactactat taacaggggt
      601 ggttcttcga ctcaagcagt taccaagccc cgacccaacg gcaatgggca gcctcggaaa
      661 gtagataatt actcaagacc tcaagcaaaa attcagatgc taaagaatac gagagactac
      721 tcatttctat tatcggatga cgctgagctt ccagttcctc caaagattcc tcctaaaagg
      781 gtccccgctc caaaacccga ggtgcgtccg tcagaaagac aagcaaacac taatggtaga
      841 aaagtcatga atggtcgtga agagagaaga cccgtgccga cgtctagtca aatgcgacca
      901 aaatctggtc cacaaagtca aagacctggt actgcgagta agttgacttc gacatcatta
      961 gattcaagaa aacaagttgt cagaaatgaa gggagtggtc agggtcggcc ttcgggacat
     1021 aaacctttgc cttcaaagac gccgttggtt aacaagcaaa aggtgaattc tacacaagtt
     1081 gctagagggt ctatacccac cggtcacaaa ccgcttccct ctagatcacc accatctgtg
     1141 cagaagagac ccgttgaaca taagagggat gatagaggat ttagcaacgg aaacacgatt
     1201 agaaaacctg tgacgacttc taaacctcag ataaagcaac aatcagctag accaccatct
     1261 agctcacagc ataaggaacg accacaaaaa agacctgctc ggccatttga tgatgatgac
     1321 gacgaccaga acgccatcag catgatcaga aatatgttca gatataatcc caacagattt
     1381 cgtgatatca atgatgatga tgatagtgac atggaggctg gttttgatga catcatgcaa
     1441 gaggagaaac gcagtgcgag gattggtgct aaggaagatg aagaagagct taagaagatt
     1501 gaagaagaag aaaggagaga acgaatgaga aaagaggcaa agaaacggaa gcttggccat
     1561 cgataatgat ttggtgccgt gtttatggaa ccattactct gcatattgct accaattcat
     1621 aatttagttg gagattatgc tttagaaggg ggtaatacat tgctaccaat gttcattggg
     1681 tttctaaaat tcgaatcatg ttttattttt catctttcta aagcaatgtt taatctttat
     1741 atagaaagaa ttgtacatta gtaccattgt ctgttggttt ttttttttta acagtgttca
     1801 atcttggtat ttttaaagta tcattacttt atttagaaag atcaaaatac atttctttga
     1861 a
//
LOCUS       XM_071830390            1861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable auxin efflux
            carrier component 1b (LOC139840166), transcript variant X1, mRNA.
ACCESSION   XM_071830390
VERSION     XM_071830390.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1861
                     /gene="LOC139840166"
                     /note="probable auxin efflux carrier component 1b; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 61 Proteins"
                     /db_xref="GeneID:139840166"
     CDS             1..1755
                     /gene="LOC139840166"
                     /codon_start=1
                     /product="probable auxin efflux carrier component 1b
                     isoform X1"
                     /protein_id="XP_071686491.1"
                     /db_xref="GeneID:139840166"
                     /translation="MITGTDLYHVFTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINR
                     FVALFAVPLLSFHFISSNNPYTMNTRFIAADTLQKLIVLIVLAFWSRLSARGSLEWSI
                     TLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLL
                     IAEQFPDTAGSIISFRVDSDILSLDGKEPLQTEAEIGDDGKLHVTVRKSNSSRSEIFS
                     RRSHGGMNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHANFYSIVNGKNGVSP
                     RGSNFGGYDEESGKVNGQGSTGYPAPASAGIFSPVNGTAGNKKGGDGGKDLHMFVWSS
                     NASPVSESGIHVFRGAAYGNDLGGVPHTKDYDGHGRNEFSFGNQPGPNGVDHEASVLS
                     KLGSNSTAELHPKDGPHGETKIASMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTW
                     SLVSFKWNVVMPAIVAKSIAILSDAGLGMAMFSLGLFMALQPKIIACGNSVAVFAMAV
                     RFIVGPAVMTAASMAFRLEGTLLHVAIVQAALPQGIVPFVFAKEYNVHPEILSTGVIF
                     GMLIALPITLVYYIVLGL"
     misc_feature    25..>570
                     /gene="LOC139840166"
                     /note="Membrane transport protein; Region: Mem_trans;
                     pfam03547"
                     /db_xref="CDD:308904"
     misc_feature    <1174..1737
                     /gene="LOC139840166"
                     /note="Membrane transport protein; Region: Mem_trans;
                     pfam03547"
                     /db_xref="CDD:308904"
ORIGIN      
        1 atgattactg gtactgatct ttaccatgtt tttactgctg ttgtaccact ttatgttgct
       61 atgattttag cctatggttc tgtaaaatgg tggaaaattt tcaccccaga tcaatgttct
      121 ggaatcaaca gatttgtagc tctttttgct gttccattac tctcatttca cttcatttca
      181 tcaaacaatc cttacactat gaacacaaga ttcatagctg ctgacacact tcaaaaactc
      241 atagtactaa ttgttttagc cttttggtca agattaagtg ctagaggctc attagaatgg
      301 tcaatcactc tgttttctct atcaacatta ccaaacacac ttgttatggg tatcccactt
      361 ttaaaaggaa tgtatggtga tttttcaggc agtttaatgg tccaaattgt tgtgttacaa
      421 tgcattattt ggtacacctt aatgctgttt ttgtttgagt atagaggtgc tagactacta
      481 attgctgaac agtttccaga cactgctgga tcaataatct cattcagagt tgattcagac
      541 attttatcac ttgatggtaa agaaccttta caaacagaag ctgaaattgg tgatgatggt
      601 aaactacatg tcactgtacg gaagtccaac agttcaagat cggaaatttt ttcacggcgg
      661 tcacacggcg gcatgaactc cggcgtgtca ttaactccta gaccatcaaa cttaacaaat
      721 gcggaaattt actcactgca gtcatcaaga aacccaacac caagaggttc tagtttcaac
      781 catgctaatt tttactcaat tgtgaatggt aaaaatgggg ttagtccaag agggtcaaat
      841 tttggtgggt atgatgaaga aagtggtaag gtaaatgggc aagggagtac agggtatcct
      901 gctccggcga gcgccggaat cttttctccg gtgaacggaa cggctgggaa caagaaaggt
      961 ggtgatggtg ggaaagattt acatatgttt gtgtggagtt caaatgcttc accagtttct
     1021 gaaagtggga ttcatgtgtt tagaggtgca gcgtatggga atgatcttgg aggtgtaccc
     1081 cacactaaag attatgatgg tcatgggcga aatgagttca gtttcggtaa ccaaccaggc
     1141 ccaaatggag tggaccatga agcatctgtt ctatctaaac ttggctctaa ctcaactgcc
     1201 gagctgcatc cgaaggatgg ccctcatggt gaaacgaaga tcgcatctat gccacctgct
     1261 agtgtcatga ctcgacttat attgatcatg gtttggcgta aacttatcag aaatcctaac
     1321 acatattcaa gtctcattgg tctcacttgg tccctagtct cattcaagtg gaatgttgta
     1381 atgccagcaa ttgttgcaaa atcaatagcg attttatctg atgctggtct aggcatggcc
     1441 atgtttagtc tcggtttgtt catggcattg caacccaaaa ttatagcttg tggaaactcg
     1501 gttgcagtct ttgccatggc ggttcgattc atagttggac cagctgtcat gacagctgcc
     1561 tcaatggctt ttagactaga aggaacactg ctacatgttg ccattgtcca ggctgctcta
     1621 cctcaaggaa ttgtgccttt tgtgtttgct aaggagtaca atgtacatcc agagatactt
     1681 agcacagggg ttatatttgg aatgttgata gcactaccaa tcacactggt gtattacatt
     1741 gtgttggggc tttgaatgaa tgaacaccga ctcttgtcct tctacttgaa gaagttttgt
     1801 tggggtcctc taactttctg aaatttacca ttttgttaac tatttagtga aagagtaaaa
     1861 a
//
LOCUS       XM_071830391            1798 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable auxin efflux
            carrier component 1b (LOC139840166), transcript variant X2, mRNA.
ACCESSION   XM_071830391
VERSION     XM_071830391.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1798
                     /gene="LOC139840166"
                     /note="probable auxin efflux carrier component 1b; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 53 Proteins"
                     /db_xref="GeneID:139840166"
     CDS             1..1692
                     /gene="LOC139840166"
                     /codon_start=1
                     /product="probable auxin efflux carrier component 1b
                     isoform X2"
                     /protein_id="XP_071686492.1"
                     /db_xref="GeneID:139840166"
                     /translation="MITGTDLYHVFTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINR
                     FVALFAVPLLSFHFISSNNPYTMNTRFIAADTLQKLIVLIVLAFWSRLSARGSLEWSI
                     TLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLL
                     IAEQFPDTAGSIISFRVDSDILSLDGKEPLQTEAEIGDDGKLHVTVRKSNSSRSEIFS
                     RRSHGGMNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHANFYSIVNGKNGVSP
                     RGSNFGGAGIFSPVNGTAGNKKGGDGGKDLHMFVWSSNASPVSESGIHVFRGAAYGND
                     LGGVPHTKDYDGHGRNEFSFGNQPGPNGVDHEASVLSKLGSNSTAELHPKDGPHGETK
                     IASMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWNVVMPAIVAKSIAI
                     LSDAGLGMAMFSLGLFMALQPKIIACGNSVAVFAMAVRFIVGPAVMTAASMAFRLEGT
                     LLHVAIVQAALPQGIVPFVFAKEYNVHPEILSTGVIFGMLIALPITLVYYIVLGL"
     misc_feature    25..>570
                     /gene="LOC139840166"
                     /note="Membrane transport protein; Region: Mem_trans;
                     pfam03547"
                     /db_xref="CDD:308904"
     misc_feature    <1111..1674
                     /gene="LOC139840166"
                     /note="Membrane transport protein; Region: Mem_trans;
                     pfam03547"
                     /db_xref="CDD:308904"
ORIGIN      
        1 atgattactg gtactgatct ttaccatgtt tttactgctg ttgtaccact ttatgttgct
       61 atgattttag cctatggttc tgtaaaatgg tggaaaattt tcaccccaga tcaatgttct
      121 ggaatcaaca gatttgtagc tctttttgct gttccattac tctcatttca cttcatttca
      181 tcaaacaatc cttacactat gaacacaaga ttcatagctg ctgacacact tcaaaaactc
      241 atagtactaa ttgttttagc cttttggtca agattaagtg ctagaggctc attagaatgg
      301 tcaatcactc tgttttctct atcaacatta ccaaacacac ttgttatggg tatcccactt
      361 ttaaaaggaa tgtatggtga tttttcaggc agtttaatgg tccaaattgt tgtgttacaa
      421 tgcattattt ggtacacctt aatgctgttt ttgtttgagt atagaggtgc tagactacta
      481 attgctgaac agtttccaga cactgctgga tcaataatct cattcagagt tgattcagac
      541 attttatcac ttgatggtaa agaaccttta caaacagaag ctgaaattgg tgatgatggt
      601 aaactacatg tcactgtacg gaagtccaac agttcaagat cggaaatttt ttcacggcgg
      661 tcacacggcg gcatgaactc cggcgtgtca ttaactccta gaccatcaaa cttaacaaat
      721 gcggaaattt actcactgca gtcatcaaga aacccaacac caagaggttc tagtttcaac
      781 catgctaatt tttactcaat tgtgaatggt aaaaatgggg ttagtccaag agggtcaaat
      841 tttggtggcg ccggaatctt ttctccggtg aacggaacgg ctgggaacaa gaaaggtggt
      901 gatggtggga aagatttaca tatgtttgtg tggagttcaa atgcttcacc agtttctgaa
      961 agtgggattc atgtgtttag aggtgcagcg tatgggaatg atcttggagg tgtaccccac
     1021 actaaagatt atgatggtca tgggcgaaat gagttcagtt tcggtaacca accaggccca
     1081 aatggagtgg accatgaagc atctgttcta tctaaacttg gctctaactc aactgccgag
     1141 ctgcatccga aggatggccc tcatggtgaa acgaagatcg catctatgcc acctgctagt
     1201 gtcatgactc gacttatatt gatcatggtt tggcgtaaac ttatcagaaa tcctaacaca
     1261 tattcaagtc tcattggtct cacttggtcc ctagtctcat tcaagtggaa tgttgtaatg
     1321 ccagcaattg ttgcaaaatc aatagcgatt ttatctgatg ctggtctagg catggccatg
     1381 tttagtctcg gtttgttcat ggcattgcaa cccaaaatta tagcttgtgg aaactcggtt
     1441 gcagtctttg ccatggcggt tcgattcata gttggaccag ctgtcatgac agctgcctca
     1501 atggctttta gactagaagg aacactgcta catgttgcca ttgtccaggc tgctctacct
     1561 caaggaattg tgccttttgt gtttgctaag gagtacaatg tacatccaga gatacttagc
     1621 acaggggtta tatttggaat gttgatagca ctaccaatca cactggtgta ttacattgtg
     1681 ttggggcttt gaatgaatga acaccgactc ttgtccttct acttgaagaa gttttgttgg
     1741 ggtcctctaa ctttctgaaa tttaccattt tgttaactat ttagtgaaag agtaaaaa
//
LOCUS       XM_071830392            1783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable auxin efflux
            carrier component 1b (LOC139840166), transcript variant X3, mRNA.
ACCESSION   XM_071830392
VERSION     XM_071830392.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1783
                     /gene="LOC139840166"
                     /note="probable auxin efflux carrier component 1b; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 54 Proteins"
                     /db_xref="GeneID:139840166"
     CDS             1..1677
                     /gene="LOC139840166"
                     /codon_start=1
                     /product="probable auxin efflux carrier component 1c
                     isoform X3"
                     /protein_id="XP_071686493.1"
                     /db_xref="GeneID:139840166"
                     /translation="MITGTDLYHVFTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINR
                     FVALFAVPLLSFHFISSNNPYTMNTRFIAADTLQKLIVLIVLAFWSRLSARGSLEWSI
                     TLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLL
                     IAEQFPDTAGSIISFRVDSDILSLDGKEPLQTEAEIGDDGKLHVTVRKSNSSRSEIFS
                     RRSHGGMNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHANFYSIVNGKNGVSP
                     RGSNFGGYDEESGKVNGQGSTGYPAPASAGIFSPVNGTAGNKKGGDGGKDLHMFVWSS
                     NASPVSESGIHVFRGAAYGNDLGVDHEASVLSKLGSNSTAELHPKDGPHGETKIASMP
                     PASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWNVVMPAIVAKSIAILSDAG
                     LGMAMFSLGLFMALQPKIIACGNSVAVFAMAVRFIVGPAVMTAASMAFRLEGTLLHVA
                     IVQAALPQGIVPFVFAKEYNVHPEILSTGVIFGMLIALPITLVYYIVLGL"
     misc_feature    25..>570
                     /gene="LOC139840166"
                     /note="Membrane transport protein; Region: Mem_trans;
                     pfam03547"
                     /db_xref="CDD:308904"
     misc_feature    <1096..1659
                     /gene="LOC139840166"
                     /note="Membrane transport protein; Region: Mem_trans;
                     pfam03547"
                     /db_xref="CDD:308904"
ORIGIN      
        1 atgattactg gtactgatct ttaccatgtt tttactgctg ttgtaccact ttatgttgct
       61 atgattttag cctatggttc tgtaaaatgg tggaaaattt tcaccccaga tcaatgttct
      121 ggaatcaaca gatttgtagc tctttttgct gttccattac tctcatttca cttcatttca
      181 tcaaacaatc cttacactat gaacacaaga ttcatagctg ctgacacact tcaaaaactc
      241 atagtactaa ttgttttagc cttttggtca agattaagtg ctagaggctc attagaatgg
      301 tcaatcactc tgttttctct atcaacatta ccaaacacac ttgttatggg tatcccactt
      361 ttaaaaggaa tgtatggtga tttttcaggc agtttaatgg tccaaattgt tgtgttacaa
      421 tgcattattt ggtacacctt aatgctgttt ttgtttgagt atagaggtgc tagactacta
      481 attgctgaac agtttccaga cactgctgga tcaataatct cattcagagt tgattcagac
      541 attttatcac ttgatggtaa agaaccttta caaacagaag ctgaaattgg tgatgatggt
      601 aaactacatg tcactgtacg gaagtccaac agttcaagat cggaaatttt ttcacggcgg
      661 tcacacggcg gcatgaactc cggcgtgtca ttaactccta gaccatcaaa cttaacaaat
      721 gcggaaattt actcactgca gtcatcaaga aacccaacac caagaggttc tagtttcaac
      781 catgctaatt tttactcaat tgtgaatggt aaaaatgggg ttagtccaag agggtcaaat
      841 tttggtgggt atgatgaaga aagtggtaag gtaaatgggc aagggagtac agggtatcct
      901 gctccggcga gcgccggaat cttttctccg gtgaacggaa cggctgggaa caagaaaggt
      961 ggtgatggtg ggaaagattt acatatgttt gtgtggagtt caaatgcttc accagtttct
     1021 gaaagtggga ttcatgtgtt tagaggtgca gcgtatggga atgatcttgg agtggaccat
     1081 gaagcatctg ttctatctaa acttggctct aactcaactg ccgagctgca tccgaaggat
     1141 ggccctcatg gtgaaacgaa gatcgcatct atgccacctg ctagtgtcat gactcgactt
     1201 atattgatca tggtttggcg taaacttatc agaaatccta acacatattc aagtctcatt
     1261 ggtctcactt ggtccctagt ctcattcaag tggaatgttg taatgccagc aattgttgca
     1321 aaatcaatag cgattttatc tgatgctggt ctaggcatgg ccatgtttag tctcggtttg
     1381 ttcatggcat tgcaacccaa aattatagct tgtggaaact cggttgcagt ctttgccatg
     1441 gcggttcgat tcatagttgg accagctgtc atgacagctg cctcaatggc ttttagacta
     1501 gaaggaacac tgctacatgt tgccattgtc caggctgctc tacctcaagg aattgtgcct
     1561 tttgtgtttg ctaaggagta caatgtacat ccagagatac ttagcacagg ggttatattt
     1621 ggaatgttga tagcactacc aatcacactg gtgtattaca ttgtgttggg gctttgaatg
     1681 aatgaacacc gactcttgtc cttctacttg aagaagtttt gttggggtcc tctaactttc
     1741 tgaaatttac cattttgtta actatttagt gaaagagtaa aaa
//
LOCUS       XM_071830393            1070 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840167), mRNA.
ACCESSION   XM_071830393
VERSION     XM_071830393.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1070
                     /gene="LOC139840167"
                     /note="uncharacterized LOC139840167; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 45
                     Proteins"
                     /db_xref="GeneID:139840167"
     CDS             75..944
                     /gene="LOC139840167"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686494.1"
                     /db_xref="GeneID:139840167"
                     /translation="MIERQSMSYVSTQSSSEFEPWRNLKDIIVMVTGASSGIGWEFCI
                     DLAKSGCKIITAARRTDRLKSLCDQINNLDRPNDDVLAFAVELDVSADGPAIEASVQK
                     AWNFFGRIDALINNAGIRGPVKTPLNLSEKDWDKTFGTNVKGSWMVSKYVSLQMIACN
                     QGGSIINISSTAGLNRGHLPGALAYATSKSALNTMTKVMAMELGKHNIRVNSISPGIF
                     KSEITEELLQKKWFKNVVSKTMPLRELGITDPALTSLVKYLICGSSNYVTGNIFVVDS
                     GYTLPGVPIFSSL"
     misc_feature    144..914
                     /gene="LOC139840167"
                     /note="NAD(P)-dependent dehydrogenase, short-chain alcohol
                     dehydrogenase family [Lipid transport and metabolism];
                     Region: FabG; COG1028"
                     /db_xref="CDD:440651"
ORIGIN      
        1 gatgacacat ttttaactct caaaaaccac accttcaaga tacaatttca agttctacag
       61 tcgaacataa gcaaatgatt gaacgacaat caatgagtta cgtttcaact caatcaagct
      121 ccgaattcga accatggcgg aacctaaaag acataatcgt gatggtcacc ggcgcatctt
      181 ccggaatcgg gtgggaattt tgtatcgatt tagcaaaatc tggttgcaaa atcatcactg
      241 ctgcccgtcg aactgaccgc ctcaaatctc tctgcgatca aatcaacaat ttagacagac
      301 caaacgacga cgttttagca ttcgcggtcg aacttgacgt cagcgctgac ggtcctgcaa
      361 ttgaagcgtc tgtacaaaaa gcttggaact tttttggccg tattgatgct ttaattaata
      421 acgccggtat tagaggtcct gtaaaaactc cattaaattt gtcagaaaaa gattgggaca
      481 aaacgtttgg aacaaatgta aaaggctcat ggatggtgtc gaagtatgtt agcctacaaa
      541 tgattgcttg taatcaaggg gggtccataa ttaatatctc ttcgactgcg ggtcttaatc
      601 gaggacatct acctggtgct cttgcatatg ctacttctaa atcagccctt aataccatga
      661 caaaggtaat ggcaatggaa cttggaaaac acaacataag ggtaaattca atatctcccg
      721 ggatttttaa gtccgagatt acagaggaac tcctgcaaaa gaaatggttc aaaaatgtgg
      781 tttcgaaaac aatgccgttg agagaattgg gtattaccga cccagcgttg acttcattag
      841 tcaagtacct aatttgtggc tcatcaaact atgtgactgg taacatattt gttgtagatt
      901 caggctacac cttaccaggt gtaccaattt tttcatcact ttaataaact tatggtgtta
      961 tgatggttat ctgatcattt ttacctcagt aatgctaata aataatattg agctagaatc
     1021 ttatccttac tatcctaggt taaactaatg ctgattttta aactaagagt
//
LOCUS       XM_071830394            1635 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450 98A2-like
            (LOC139840168), mRNA.
ACCESSION   XM_071830394
VERSION     XM_071830394.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1635
                     /gene="LOC139840168"
                     /note="cytochrome P450 98A2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139840168"
     CDS             16..1551
                     /gene="LOC139840168"
                     /codon_start=1
                     /product="cytochrome P450 98A2-like"
                     /protein_id="XP_071686495.1"
                     /db_xref="GeneID:139840168"
                     /translation="MAMLLLISTILIILPIVYYTIQSLLFRLRFKLPPGPRPLPIVGN
                     LYDVKPVKFRCYAEWARTYGPIFSVYLDSKINVIVNSSELAKEVLKENDQMLADRHRN
                     RATMSFSRGGQDLIWADYGPHYVKVRKVCNLELFSPKRLEALRPIREDEVSAMVEDIF
                     NYSSDPDNRGKSILMRGYLGSVAFNNITRLTFGKRFVNSEGAMDDQGKDFKGIVSNGI
                     KIGGKVFMAENIPWLRWLFAGENDILLKHEQRRDRLTKAIMAEHDLARKKTGGAQEHF
                     IDALHTLQQKYDLSEDTIIGLLWDMITAGMDTTSISAEWAMAELVKNPRVQQKAQEEL
                     DRVIGTDRIMSETDFSKLPYLQSIAKEALRLHPPTPLMLPHKANSNVKLGGYDVPKGG
                     IVHVNVWAIARDPAIWKDPEEFRPERFFEEDVDVKGHDYRLLPFGAGRRVCPGAQLAI
                     NLVTSMLGHLLHHFEWTPPAGIKPEEVDMTEAPGMVTYMKNPLQAVVTPRLPNNLYKR
                     VPA"
     misc_feature    202..1500
                     /gene="LOC139840168"
                     /note="cytochrome P450 family 98; Region: CYP98; cd20656"
                     /db_xref="CDD:410749"
     misc_feature    order(310..312,385..387,397..399,421..423,574..576,
                     916..918,925..930,937..942,1117..1119,1129..1134,
                     1138..1140,1318..1329,1336..1350,1357..1362)
                     /gene="LOC139840168"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410749"
     misc_feature    order(664..666,676..678,745..747,913..915,922..927,
                     1132..1134)
                     /gene="LOC139840168"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410749"
ORIGIN      
        1 acacacaaac acaaaatggc tatgttactt ctcatatcaa ccatcttgat catcttacca
       61 attgtgtatt acacaattca atccttatta tttcgtctaa ggttcaaact tccaccgggc
      121 ccacgaccac ttccaattgt tggaaacttg tacgatgtaa aaccagttaa gtttagatgt
      181 tatgctgaat gggcaagaac atacggtccg atattttcgg tgtatttaga ttcaaagatc
      241 aatgtgattg ttaatagtag tgagttggct aaagaagtat tgaaagaaaa tgatcaaatg
      301 ttggctgata gacataggaa ccgtgcaacg atgtcgttta gtagaggtgg gcaagattta
      361 atttgggctg attatggacc ccattatgtt aaagttagaa aagtttgtaa cttggagctt
      421 ttttcgccta aaagattaga agctttgaga cccattagag aagatgaagt ttctgctatg
      481 gttgaagata tttttaacta ttcttctgac cctgataacc gaggaaaaag catactgatg
      541 cgaggttatt tgggatcagt ggcgttcaac aatattacaa gattgacatt tggtaaacga
      601 tttgtgaatt cggaaggtgc aatggatgat caagggaaag attttaaagg cattgtatca
      661 aatggaatta agatcggtgg caaggttttt atggctgaaa atattccatg gttgagatgg
      721 ttatttgcag gtgaaaacga tattctttta aagcatgagc aacgcagaga ccgactcacg
      781 aaagccatta tggcagaaca cgatcttgca cgtaagaaaa ctggtggggc ccaagagcat
      841 ttcatcgatg ctttacatac acttcaacag aagtatgatc tcagtgagga cacaattatt
      901 ggacttcttt gggacatgat cacagctgga atggacacaa cctcgatctc tgctgagtgg
      961 gcgatggccg agttagttaa gaacccacgt gttcaacaaa aagctcaaga agagctcgat
     1021 cgggtcattg gaaccgaccg aatcatgtca gaaaccgact tctcaaagct tccatatctc
     1081 cagtcaatag ccaaagaagc cttacggttg cacccaccga cccctctgat gctcccacac
     1141 aaggccaact caaacgttaa gctcggtgga tatgatgtcc cgaaaggtgg tattgtacac
     1201 gtaaacgtgt gggccatcgc tcgtgaccca gccatctgga aggacccgga agaattcagg
     1261 cccgaacggt tctttgagga ggatgtagat gttaagggtc acgactaccg gctgttaccg
     1321 tttggggcag ggagacgggt ctgcccaggt gcacaactag caatcaacct ggtcacatct
     1381 atgttgggtc accttttgca ccattttgag tggaccccac cggctggaat caaacctgaa
     1441 gaagtggaca tgactgaggc accaggaatg gtaacttaca tgaagaaccc acttcaagcg
     1501 gttgtgacac cgcgattacc gaacaacctg tacaagcgag tacctgcata agatgttttt
     1561 gtagtgtttt gttgtatttt gttatatgaa ttgtctatct agttgtaaca ttgtgttttt
     1621 ggaatgggtt tatta
//
LOCUS       XM_071830395            1997 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            EXO70A1-like (LOC139840169), mRNA.
ACCESSION   XM_071830395
VERSION     XM_071830395.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1997
                     /gene="LOC139840169"
                     /note="exocyst complex component EXO70A1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139840169"
     CDS             1..1899
                     /gene="LOC139840169"
                     /codon_start=1
                     /product="exocyst complex component EXO70A1-like"
                     /protein_id="XP_071686496.1"
                     /db_xref="GeneID:139840169"
                     /translation="MAFNDVAMETLRDRANTMRDCLARSQIITDNMTSILGSFDLRLS
                     ALETAMRPTQIKTHSMRRAHENIDKTLKLADAVLVQFDLVKQAEAEIMRGPHEDLESY
                     LEAVNQLKQIMRFFSTNKTLKSSIGVITQCTTLLQKASLMLEEEFRQLLASCSKAVEP
                     DRLFDCLPANLRPTTAQGEGAKKHTSDHNKNAENVVYNPPTLVPPKVIRMLHYLANQM
                     CQTGQQQQVFIIYKECRSLCMESSLKKLGVEKLGKDDVQKMQWEVLEAKIGNWIHFVR
                     IAVKLLFVAERKVSDQVFEGMESFMDQCFVEATASSVSMLLSFGEAIARSKRSPEKLF
                     VLLDMYEIMKEVQPEFNTIYGSISGAEMRESVSALTKHLAETAQETFVDFEEAVEKDA
                     TKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFLEFQESDPDAQLGKITTRIMQAL
                     QNNLDGKSKQYKDQALTQLFMMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRVVQQHAN
                     QYKRISWSKILQCLTIQAAGSDGTSTAGVSRTLVKERFKTFSSQFEELHQRQSQWTVP
                     DSELRESLRLAVAEVLLPAYRSFKKRFGPLIEGGKNPSKYIRFQPEDLERMLAEFFEG
                     KTLHEHKR"
     misc_feature    808..1860
                     /gene="LOC139840169"
                     /note="Exo70 exocyst complex subunit; Region: Exo70;
                     pfam03081"
                     /db_xref="CDD:460798"
ORIGIN      
        1 atggcgttta atgatgtagc aatggaaact ttacgagatc gtgcgaatac aatgagggat
       61 tgccttgcaa gaagccagat catcaccgat aacatgacgt caattctcgg ttcttttgat
      121 ctccgtctct ctgccctcga aactgccatg cgtcccacac agattaaaac acattcaatg
      181 agacgagcac acgaaaacat tgataaaact ttaaagctcg cggatgcagt tttagtccag
      241 tttgatcttg ttaaacaggc tgaggctgaa attatgagag gtccgcatga agatttggaa
      301 agttatttag aagcggtaaa tcagttgaaa caaatcatgc ggttctttag tacaaataaa
      361 actcttaaga gtagtattgg agtgattaca caatgtacaa ctttgcttca aaaggcttca
      421 ttgatgcttg aagaggaatt tagacagttg ttagcctctt gcagtaaagc tgttgaaccg
      481 gatcggcttt ttgattgtct tcctgctaac cttagaccaa caactgctca aggtgaaggt
      541 gccaagaaac atacgtctga tcataataaa aatgcagaaa acgttgttta taaccctcca
      601 actctcgtgc caccaaaagt tatacggatg ttgcattatc tagctaacca gatgtgtcaa
      661 actggtcaac aacaacaagt gtttattatt tacaaggaat gtcgatcttt gtgtatggag
      721 agcagtctaa agaaacttgg agttgaaaag cttggtaaag atgatgttca aaagatgcaa
      781 tgggaggttt tggaggctaa aataggaaat tggattcatt ttgtgcgaat tgctgtaaaa
      841 ctgctatttg ttgctgaacg aaaagtatcg gatcaagttt ttgaaggaat ggaatcattt
      901 atggatcaat gttttgtaga agcaactgca agtagtgttt cgatgctact tagctttggt
      961 gaagctattg ctagaagcaa gagatcacct gaaaagttat ttgtccttct tgatatgtat
     1021 gagataatga aagaagttca accagagttc aacacgatat atggaagtat ttctggtgct
     1081 gaaatgaggg aatcggtttc tgctttgact aaacatttag cagaaacggc tcaagagact
     1141 tttgttgact ttgaagaagc tgttgaaaaa gatgcaacaa aaactgctgt acttgatgga
     1201 actgttcatc cgttgactag ttacgtcatc aactacgtaa agttcttatt tgattaccag
     1261 tcaacactga agcaactttt cttggagttt caagaatctg atcctgatgc ccaattggga
     1321 aaaataacaa cccgtataat gcaggcattg caaaataatt tagatggaaa atctaaacaa
     1381 tataaagatc aagctctaac tcagttattc atgatgaaca atatccacta cattgttaga
     1441 tctgtgagaa ggtctgaagc aaaggatatg ttaggcgatg actgggtaca aattcatcga
     1501 agagttgtgc agcaacatgc caatcaatat aaaagaatat cttggtccaa gatattacag
     1561 tgcctcacga ttcaagctgc tggtagtgac ggaaccagca ctgctggggt gtctcggaca
     1621 cttgttaagg aaaggttcaa gacattcagt tcacaatttg aggaactgca tcaaaggcaa
     1681 tcgcaatgga ctgttcctga tagtgagtta cgcgagtcct tgaggctggc tgttgctgaa
     1741 gtccttttac ctgcctacag atctttcaaa aaacgattcg gaccactaat tgagggtggt
     1801 aaaaacccat caaaatacat cagattccaa ccagaggatc ttgaacgaat gctggcagag
     1861 tttttcgaag gaaaaacatt gcacgaacat aagcgataga ttttattgat catttttatg
     1921 gtcaaatgga agtttcttta ttcttttggt tactttttga tatgaataaa atgagagatg
     1981 gtatattact gtcccat
//
LOCUS       XM_071830396            1506 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At5g07050-like (LOC139840170), mRNA.
ACCESSION   XM_071830396
VERSION     XM_071830396.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1506
                     /gene="LOC139840170"
                     /note="WAT1-related protein At5g07050-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139840170"
     CDS             101..1330
                     /gene="LOC139840170"
                     /codon_start=1
                     /product="WAT1-related protein At5g07050-like"
                     /protein_id="XP_071686497.1"
                     /db_xref="GeneID:139840170"
                     /translation="MEGKLGCFARFFLSSKPYIAMICLQFGYAGMNIITKVSLDGGMS
                     HYVLVVYRHAFATAAIAPFAIILERNIRPKITFSIFMQMFVLGLLGPVIDQNFYYAGL
                     KFTSPTFSCAMSNMLPAMTFVMAVLCRMEKLNLRTVRSQAKVVGTIFTVAGAMLMTLY
                     KGNVVELFWTKHVHPHYAETTSATSDSSDKEWVTGSILLIIATFAWASFFIVQNVTMR
                     RYTAPLSLTCLVCFIGTLQSIVVTFVMEHKPDVWTIGWDMNLLAAAYAGIVSSSIAYY
                     VQGLVMEKRGPVFVTAFSPLMMIIVAIMGSFILAEKIYMGGVMGSILIVIGLYSVLWG
                     KYKEYKEKELAEQILDPVKTNSGNNNNNNQMMIDFVEANDLEMQKDVMYKTSVPTIAI
                     SAPIPTPPMIAVEAPRV"
     misc_feature    158..1135
                     /gene="LOC139840170"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
     polyA_site      1506
                     /gene="LOC139840170"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caaacatctt caagtgtttt cctcttctta gctactacac ttttctacct ctagttacat
       61 agtcttcttg ctagttcaca atcaagaaat caaaaacaaa atggaaggca aattaggatg
      121 ttttgcaagg ttttttcttt cttcgaaacc atatatcgcc atgatttgtt tgcaatttgg
      181 atatgccggg atgaacataa tcacgaaagt gtcactcgat ggcggcatga gtcactacgt
      241 cttagttgtt taccgtcatg cattcgccac tgctgctatt gccccttttg caatcatcct
      301 tgaaaggaat attcgcccaa agatcacatt ctccatattt atgcaaatgt ttgtcttggg
      361 acttcttggg ccggtgatcg atcaaaactt ctactacgcg gggctgaagt tcacatctcc
      421 aaccttttct tgtgctatga gcaacatgct tccagcaatg accttcgtta tggccgtcct
      481 atgcaggatg gagaaattga atttaagaac ggttagatct caagcaaagg tggttggaac
      541 catattcaca gtagcaggag ccatgttgat gacactctac aagggtaatg tggttgagct
      601 gttttggacc aagcatgtgc accctcatta tgctgagacc acttctgcaa cttcagactc
      661 ttctgataaa gagtgggtta caggatccat tcttcttatc attgctactt ttgcatgggc
      721 ttcctttttc attgttcaga atgtgacaat gaggagatat acagcacctc tttcactgac
      781 ttgtttggtg tgctttattg gtacattaca atcaattgtt gttacttttg taatggaaca
      841 caagcctgat gtttggacta ttggctggga tatgaatctt cttgctgctg cctatgctgg
      901 gattgtgtca tcaagtattg catactatgt acaaggtcta gtaatggaaa aaagaggacc
      961 agtttttgtg actgctttta gtcctctaat gatgatcatt gttgcaatca tggggtcttt
     1021 tattttagct gaaaagatct acatgggagg tgtgatgggt tcgatcttga tagttattgg
     1081 actatactcg gttctttggg gtaagtacaa ggagtacaag gagaaagagt tggcggaaca
     1141 aattcttgac cctgtaaaaa ctaactcggg taacaacaac aataacaatc aaatgatgat
     1201 tgatttcgtt gaggccaacg atctcgagat gcagaaagat gtgatgtaca aaacatcggt
     1261 cccaacgatc gcgattagtg ctccaatccc gacgccacca atgattgcag tggaggcacc
     1321 gagagtgtaa gaagtgatga gctaatattg agattgagag agtaagggag aaagaacaag
     1381 taaaaaacag aaaataatgt aataatgaag gggttgatta tgtacaacta caatagatta
     1441 gggatgaaaa gcaagctgct tttttgtaat tttggatttg tctgaattaa cgtttttctt
     1501 aattaa
//
LOCUS       XM_071830397            2482 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MICRORCHIDIA 6-like
            (LOC139840171), transcript variant X1, mRNA.
ACCESSION   XM_071830397
VERSION     XM_071830397.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2482
                     /gene="LOC139840171"
                     /note="protein MICRORCHIDIA 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840171"
     CDS             395..2281
                     /gene="LOC139840171"
                     /codon_start=1
                     /product="protein MICRORCHIDIA 6-like isoform X1"
                     /protein_id="XP_071686498.1"
                     /db_xref="GeneID:139840171"
                     /translation="MSDANWISSGTNVLDQKQSLDDANFCSTSPVCAAPIVRQFWKAG
                     VYNDELTPKSTTRVGSTYLHIHPRFLHSNATSHKWVFGAVAELIDNAVDEIQNGATFV
                     NIDKTLNPRNGTAALLIQDDGSGMNPEAMRRCLSFGFSDKSSLSAIGKYGNGFKTSSM
                     RLGADVIVFSRNITNRKITQSIGLLSYTFLTRECYNRIVVPMVCYEFNFVTESFDAIQ
                     SEGSDNSNLNMRMLLQWSPFSTEEELFKQFEDVGYHGTKVIVYNLWLDEDRNMELDFE
                     SDPEDIRITRDAFGKMKDSSRQAESEKQLANRLRYSLRAYLSILYLKLPETFAIVLRG
                     KVVIYRNVATDLKYTEYIMYKPAEGSVITTIGFIKEAPLSNVHGFNVYHKNRLILPFC
                     PVVSFSGNRGRGVVGILEANFIEPTHDKQDFEKTSIYQKLVQRLKEMTWEYWDYHCGL
                     LGYHIIKKPRPPSTTPGASNFIHQHGTEQPPVPFRRHANVGHIARKPPMITVKNSKAA
                     YESTSMPTPLEPSFSRSFPEGSNLKRKPSGQPARFDSEARMEVNSNRVPIKPGSVSRD
                     PINAIQENRMLRARFSEFSNLEEQLKLKVTKLNWQLSQAQAEYARLLAELQYLEKVKS
                     EATF"
     misc_feature    599..964
                     /gene="LOC139840171"
                     /note="Histidine kinase-like ATPase domain; Region:
                     HATPase; cl00075"
                     /db_xref="CDD:469604"
     misc_feature    order(650..652,662..664,671..673,749..751,755..757,
                     761..763,767..769,848..859,896..898,902..904,941..946,
                     950..952)
                     /gene="LOC139840171"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340391"
     misc_feature    order(788..790,857..859)
                     /gene="LOC139840171"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340391"
     misc_feature    1325..1726
                     /gene="LOC139840171"
                     /note="Morc6 ribosomal protein S5 domain 2-like; Region:
                     Morc6_S5; pfam17942"
                     /db_xref="CDD:465579"
ORIGIN      
        1 cactcggaca cagtcgctca ctctttttta gctacattcc aacaatcttt actctcttcc
       61 cccccggtga tgactcgccg ccgcagaccg atacctcacc gccggagaaa attcaatcac
      121 ccacacattc cactttcaca tgttcactga attcgtaccc tgtttccaaa gaaacgaatt
      181 ataattaatt atcagcgatc gcaaaaaccc taaaatattc ccaccctttc ttcttgaact
      241 gtgtttgatc tagcttctat ttgcgagttc ggaaagaaat tgtaaacaca ctcccttttt
      301 gtctacggga atggaactca cgacctcgag ttggatgccg ctagacctga agccctttgg
      361 ttaaactcat tttgacttga aggtgaaagg tagaatgtca gatgcgaatt ggatctctag
      421 tgggaccaat gtgttagatc aaaaacagtc gctcgatgat gcaaactttt gttcaacatc
      481 tccagtttgt gcagcgccta tagttaggca attttggaaa gctggagttt ataatgacga
      541 gcttactcct aaatccacaa ctcgagttgg ttcaacttat ctacatatac acccaagatt
      601 ccttcactct aatgctactt ctcacaaatg ggtttttggt gctgtagcag aacttattga
      661 caatgccgtt gacgagatac aaaatggggc tacctttgta aatattgata aaactctaaa
      721 tccgagaaat ggaactgcgg cattgttaat tcaagatgat ggaagcggga tgaatcccga
      781 agcaatgcgc cgctgcctga gttttggatt ttcagacaaa tcatcactat cagcaattgg
      841 aaaatatgga aatggcttta agaccagttc catgaggctt ggagctgatg tgatagtttt
      901 cagccgcaac attactaaca gaaaaataac ccaaagcatt ggccttttat catatacatt
      961 tttgactcga gaatgctata acagaatagt agttcccatg gtatgctatg agttcaactt
     1021 tgttacggaa tcttttgatg ccatacagtc agaaggtagc gataactcta atttgaatat
     1081 gcgtatgttg ttgcaatggt ccccattctc aacagaagag gaactattta aacaatttga
     1141 agatgttggc tatcatggca cgaaagttat tgtttacaat ctatggcttg atgaggacag
     1201 gaatatggag cttgattttg agtcagaccc cgaggatatt cgtattactc gggatgcatt
     1261 tgggaaaatg aaagatagtt ctcgtcaagc agaaagtgaa aaacaacttg ccaatcggct
     1321 ccgttattct ctccgtgcat acttatccat tttgtactta aaactacctg aaacttttgc
     1381 cattgtattg cgcgggaaag ttgtcatcta tcgtaatgtt gctacagact tgaagtacac
     1441 agaatatatc atgtataaac ccgccgaggg ttcagtgatt actacgatag gttttatcaa
     1501 ggaggctcca ctttctaatg tccatggttt taatgtctac cacaaaaatc ggttaatact
     1561 gccattttgt cccgtggtta gcttttctgg aaacagagga agaggtgtag ttggtattct
     1621 tgaagcaaat tttatcgagc ctactcatga caagcaagat tttgagaaaa cttctattta
     1681 ccaaaaacta gttcaacgct tgaaagaaat gacatgggaa tattgggatt accattgtgg
     1741 actgctcggg tatcatataa tcaaaaaacc tcgacccccg tcgacaaccc cgggtgcttc
     1801 taattttatt catcagcatg gtacggaaca accccccgtt ccctttagaa gacacgccaa
     1861 tgtcggtcat atagcgagaa aaccaccgat gataaccgta aaaaatagca aggcagctta
     1921 tgagtcaaca tccatgccaa caccgctaga gccaagtttt tctagaagtt tcccagaagg
     1981 gtcaaacctg aagagaaaac caagtggtca acctgcaagg ttcgattcag aggctcggat
     2041 ggaggttaat tctaacagag taccaattaa gcctggttcg gttagtcgtg acccaataaa
     2101 tgcaattcaa gaaaaccgaa tgcttcgagc ccgattctca gagttcagta acttagaaga
     2161 acaactaaaa cttaaggtga caaaacttaa ttggcaacta agccaagccc aagcggagta
     2221 tgctcgtctg ctggccgagt tgcaatacct ggagaaagtg aagtcggaag caactttctg
     2281 atgtgtttag ttcgtttagt acgataaaat aatccatttt ctttgtgatg tttacaatct
     2341 aatttttagt tatattatat tcggtccttg aacacccaaa gcctaacctg gtaccagtag
     2401 ctgtaggtta ttgggtttag gaaaaaccgg atataccttt gaaatcatgt aaacactttc
     2461 gcaataaagt atttcgaccc ta
//
LOCUS       XM_071830398            2476 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MICRORCHIDIA 6-like
            (LOC139840171), transcript variant X2, mRNA.
ACCESSION   XM_071830398
VERSION     XM_071830398.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2476
                     /gene="LOC139840171"
                     /note="protein MICRORCHIDIA 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840171"
     CDS             389..2275
                     /gene="LOC139840171"
                     /codon_start=1
                     /product="protein MICRORCHIDIA 6-like isoform X1"
                     /protein_id="XP_071686499.1"
                     /db_xref="GeneID:139840171"
                     /translation="MSDANWISSGTNVLDQKQSLDDANFCSTSPVCAAPIVRQFWKAG
                     VYNDELTPKSTTRVGSTYLHIHPRFLHSNATSHKWVFGAVAELIDNAVDEIQNGATFV
                     NIDKTLNPRNGTAALLIQDDGSGMNPEAMRRCLSFGFSDKSSLSAIGKYGNGFKTSSM
                     RLGADVIVFSRNITNRKITQSIGLLSYTFLTRECYNRIVVPMVCYEFNFVTESFDAIQ
                     SEGSDNSNLNMRMLLQWSPFSTEEELFKQFEDVGYHGTKVIVYNLWLDEDRNMELDFE
                     SDPEDIRITRDAFGKMKDSSRQAESEKQLANRLRYSLRAYLSILYLKLPETFAIVLRG
                     KVVIYRNVATDLKYTEYIMYKPAEGSVITTIGFIKEAPLSNVHGFNVYHKNRLILPFC
                     PVVSFSGNRGRGVVGILEANFIEPTHDKQDFEKTSIYQKLVQRLKEMTWEYWDYHCGL
                     LGYHIIKKPRPPSTTPGASNFIHQHGTEQPPVPFRRHANVGHIARKPPMITVKNSKAA
                     YESTSMPTPLEPSFSRSFPEGSNLKRKPSGQPARFDSEARMEVNSNRVPIKPGSVSRD
                     PINAIQENRMLRARFSEFSNLEEQLKLKVTKLNWQLSQAQAEYARLLAELQYLEKVKS
                     EATF"
     misc_feature    593..958
                     /gene="LOC139840171"
                     /note="Histidine kinase-like ATPase domain; Region:
                     HATPase; cl00075"
                     /db_xref="CDD:469604"
     misc_feature    order(644..646,656..658,665..667,743..745,749..751,
                     755..757,761..763,842..853,890..892,896..898,935..940,
                     944..946)
                     /gene="LOC139840171"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340391"
     misc_feature    order(782..784,851..853)
                     /gene="LOC139840171"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340391"
     misc_feature    1319..1720
                     /gene="LOC139840171"
                     /note="Morc6 ribosomal protein S5 domain 2-like; Region:
                     Morc6_S5; pfam17942"
                     /db_xref="CDD:465579"
ORIGIN      
        1 cactcggaca cagtcgctca ctctttttta gctacattcc aacaatcttt actctcttcc
       61 cccccggtga tgactcgccg ccgcagaccg atacctcacc gccggagaaa attcaatcac
      121 ccacacattc cactttcaca tgttcactga attcgtaccc tgtttccaaa gaaacgaatt
      181 ataattaatt atcagcgatc gcaaaaaccc taaaatattc ccaccctttc ttcttgaact
      241 gtgtttgatc tagcttctat ttgcgagttc ggaaagaaat tgtaaacaca ctcccttttt
      301 gtctacggga atggaactca cgacctcgag ttggatgccg ctagacctga agccctttgg
      361 ttaaactcat tttgacttga agggtagaat gtcagatgcg aattggatct ctagtgggac
      421 caatgtgtta gatcaaaaac agtcgctcga tgatgcaaac ttttgttcaa catctccagt
      481 ttgtgcagcg cctatagtta ggcaattttg gaaagctgga gtttataatg acgagcttac
      541 tcctaaatcc acaactcgag ttggttcaac ttatctacat atacacccaa gattccttca
      601 ctctaatgct acttctcaca aatgggtttt tggtgctgta gcagaactta ttgacaatgc
      661 cgttgacgag atacaaaatg gggctacctt tgtaaatatt gataaaactc taaatccgag
      721 aaatggaact gcggcattgt taattcaaga tgatggaagc gggatgaatc ccgaagcaat
      781 gcgccgctgc ctgagttttg gattttcaga caaatcatca ctatcagcaa ttggaaaata
      841 tggaaatggc tttaagacca gttccatgag gcttggagct gatgtgatag ttttcagccg
      901 caacattact aacagaaaaa taacccaaag cattggcctt ttatcatata catttttgac
      961 tcgagaatgc tataacagaa tagtagttcc catggtatgc tatgagttca actttgttac
     1021 ggaatctttt gatgccatac agtcagaagg tagcgataac tctaatttga atatgcgtat
     1081 gttgttgcaa tggtccccat tctcaacaga agaggaacta tttaaacaat ttgaagatgt
     1141 tggctatcat ggcacgaaag ttattgttta caatctatgg cttgatgagg acaggaatat
     1201 ggagcttgat tttgagtcag accccgagga tattcgtatt actcgggatg catttgggaa
     1261 aatgaaagat agttctcgtc aagcagaaag tgaaaaacaa cttgccaatc ggctccgtta
     1321 ttctctccgt gcatacttat ccattttgta cttaaaacta cctgaaactt ttgccattgt
     1381 attgcgcggg aaagttgtca tctatcgtaa tgttgctaca gacttgaagt acacagaata
     1441 tatcatgtat aaacccgccg agggttcagt gattactacg ataggtttta tcaaggaggc
     1501 tccactttct aatgtccatg gttttaatgt ctaccacaaa aatcggttaa tactgccatt
     1561 ttgtcccgtg gttagctttt ctggaaacag aggaagaggt gtagttggta ttcttgaagc
     1621 aaattttatc gagcctactc atgacaagca agattttgag aaaacttcta tttaccaaaa
     1681 actagttcaa cgcttgaaag aaatgacatg ggaatattgg gattaccatt gtggactgct
     1741 cgggtatcat ataatcaaaa aacctcgacc cccgtcgaca accccgggtg cttctaattt
     1801 tattcatcag catggtacgg aacaaccccc cgttcccttt agaagacacg ccaatgtcgg
     1861 tcatatagcg agaaaaccac cgatgataac cgtaaaaaat agcaaggcag cttatgagtc
     1921 aacatccatg ccaacaccgc tagagccaag tttttctaga agtttcccag aagggtcaaa
     1981 cctgaagaga aaaccaagtg gtcaacctgc aaggttcgat tcagaggctc ggatggaggt
     2041 taattctaac agagtaccaa ttaagcctgg ttcggttagt cgtgacccaa taaatgcaat
     2101 tcaagaaaac cgaatgcttc gagcccgatt ctcagagttc agtaacttag aagaacaact
     2161 aaaacttaag gtgacaaaac ttaattggca actaagccaa gcccaagcgg agtatgctcg
     2221 tctgctggcc gagttgcaat acctggagaa agtgaagtcg gaagcaactt tctgatgtgt
     2281 ttagttcgtt tagtacgata aaataatcca ttttctttgt gatgtttaca atctaatttt
     2341 tagttatatt atattcggtc cttgaacacc caaagcctaa cctggtacca gtagctgtag
     2401 gttattgggt ttaggaaaaa ccggatatac ctttgaaatc atgtaaacac tttcgcaata
     2461 aagtatttcg acccta
//
LOCUS       XM_071830399            2050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MICRORCHIDIA 6-like
            (LOC139840171), transcript variant X3, mRNA.
ACCESSION   XM_071830399
VERSION     XM_071830399.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2050
                     /gene="LOC139840171"
                     /note="protein MICRORCHIDIA 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840171"
     CDS             137..1849
                     /gene="LOC139840171"
                     /codon_start=1
                     /product="protein MICRORCHIDIA 6-like isoform X2"
                     /protein_id="XP_071686500.1"
                     /db_xref="GeneID:139840171"
                     /translation="MTSLLLNPQLELVQLIYIYTQDSFTLMLLLTNGFLVIQNGATFV
                     NIDKTLNPRNGTAALLIQDDGSGMNPEAMRRCLSFGFSDKSSLSAIGKYGNGFKTSSM
                     RLGADVIVFSRNITNRKITQSIGLLSYTFLTRECYNRIVVPMVCYEFNFVTESFDAIQ
                     SEGSDNSNLNMRMLLQWSPFSTEEELFKQFEDVGYHGTKVIVYNLWLDEDRNMELDFE
                     SDPEDIRITRDAFGKMKDSSRQAESEKQLANRLRYSLRAYLSILYLKLPETFAIVLRG
                     KVVIYRNVATDLKYTEYIMYKPAEGSVITTIGFIKEAPLSNVHGFNVYHKNRLILPFC
                     PVVSFSGNRGRGVVGILEANFIEPTHDKQDFEKTSIYQKLVQRLKEMTWEYWDYHCGL
                     LGYHIIKKPRPPSTTPGASNFIHQHGTEQPPVPFRRHANVGHIARKPPMITVKNSKAA
                     YESTSMPTPLEPSFSRSFPEGSNLKRKPSGQPARFDSEARMEVNSNRVPIKPGSVSRD
                     PINAIQENRMLRARFSEFSNLEEQLKLKVTKLNWQLSQAQAEYARLLAELQYLEKVKS
                     EATF"
     misc_feature    221..532
                     /gene="LOC139840171"
                     /note="Histidine kinase-like ATPase domain; Region:
                     HATPase; cl00075"
                     /db_xref="CDD:469604"
     misc_feature    order(230..232,239..241,317..319,323..325,329..331,
                     335..337,416..427,464..466,470..472,509..514,518..520)
                     /gene="LOC139840171"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340391"
     misc_feature    order(356..358,425..427)
                     /gene="LOC139840171"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340391"
     misc_feature    893..1294
                     /gene="LOC139840171"
                     /note="Morc6 ribosomal protein S5 domain 2-like; Region:
                     Morc6_S5; pfam17942"
                     /db_xref="CDD:465579"
ORIGIN      
        1 tcagatgcga attggatctc tagtgggacc aatgtgttag atcaaaaaca gtcgctcgat
       61 gatgcaaact tttgttcaac atctccagtt tgtgcagcgc ctatagttag gcaattttgg
      121 aaagctggag tttataatga cgagcttact cctaaatcca caactcgagt tggttcaact
      181 tatctacata tacacccaag attccttcac tctaatgcta cttctcacaa atgggttttt
      241 ggtgatacaa aatggggcta cctttgtaaa tattgataaa actctaaatc cgagaaatgg
      301 aactgcggca ttgttaattc aagatgatgg aagcgggatg aatcccgaag caatgcgccg
      361 ctgcctgagt tttggatttt cagacaaatc atcactatca gcaattggaa aatatggaaa
      421 tggctttaag accagttcca tgaggcttgg agctgatgtg atagttttca gccgcaacat
      481 tactaacaga aaaataaccc aaagcattgg ccttttatca tatacatttt tgactcgaga
      541 atgctataac agaatagtag ttcccatggt atgctatgag ttcaactttg ttacggaatc
      601 ttttgatgcc atacagtcag aaggtagcga taactctaat ttgaatatgc gtatgttgtt
      661 gcaatggtcc ccattctcaa cagaagagga actatttaaa caatttgaag atgttggcta
      721 tcatggcacg aaagttattg tttacaatct atggcttgat gaggacagga atatggagct
      781 tgattttgag tcagaccccg aggatattcg tattactcgg gatgcatttg ggaaaatgaa
      841 agatagttct cgtcaagcag aaagtgaaaa acaacttgcc aatcggctcc gttattctct
      901 ccgtgcatac ttatccattt tgtacttaaa actacctgaa acttttgcca ttgtattgcg
      961 cgggaaagtt gtcatctatc gtaatgttgc tacagacttg aagtacacag aatatatcat
     1021 gtataaaccc gccgagggtt cagtgattac tacgataggt tttatcaagg aggctccact
     1081 ttctaatgtc catggtttta atgtctacca caaaaatcgg ttaatactgc cattttgtcc
     1141 cgtggttagc ttttctggaa acagaggaag aggtgtagtt ggtattcttg aagcaaattt
     1201 tatcgagcct actcatgaca agcaagattt tgagaaaact tctatttacc aaaaactagt
     1261 tcaacgcttg aaagaaatga catgggaata ttgggattac cattgtggac tgctcgggta
     1321 tcatataatc aaaaaacctc gacccccgtc gacaaccccg ggtgcttcta attttattca
     1381 tcagcatggt acggaacaac cccccgttcc ctttagaaga cacgccaatg tcggtcatat
     1441 agcgagaaaa ccaccgatga taaccgtaaa aaatagcaag gcagcttatg agtcaacatc
     1501 catgccaaca ccgctagagc caagtttttc tagaagtttc ccagaagggt caaacctgaa
     1561 gagaaaacca agtggtcaac ctgcaaggtt cgattcagag gctcggatgg aggttaattc
     1621 taacagagta ccaattaagc ctggttcggt tagtcgtgac ccaataaatg caattcaaga
     1681 aaaccgaatg cttcgagccc gattctcaga gttcagtaac ttagaagaac aactaaaact
     1741 taaggtgaca aaacttaatt ggcaactaag ccaagcccaa gcggagtatg ctcgtctgct
     1801 ggccgagttg caatacctgg agaaagtgaa gtcggaagca actttctgat gtgtttagtt
     1861 cgtttagtac gataaaataa tccattttct ttgtgatgtt tacaatctaa tttttagtta
     1921 tattatattc ggtccttgaa cacccaaagc ctaacctggt accagtagct gtaggttatt
     1981 gggtttagga aaaaccggat atacctttga aatcatgtaa acactttcgc aataaagtat
     2041 ttcgacccta
//
LOCUS       XM_071830400            2348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MICRORCHIDIA 6-like
            (LOC139840173), transcript variant X1, mRNA.
ACCESSION   XM_071830400
VERSION     XM_071830400.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2348
                     /gene="LOC139840173"
                     /note="protein MICRORCHIDIA 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840173"
     CDS             254..2137
                     /gene="LOC139840173"
                     /codon_start=1
                     /product="protein MICRORCHIDIA 6-like"
                     /protein_id="XP_071686501.1"
                     /db_xref="GeneID:139840173"
                     /translation="MSDANWISSGTNVLDQKQSLDDANFCSTSPICAAPIVRQFWKAG
                     VYNDELTPKSTTQSGSSYLHIHPRFLHSNATSHKWAFGAVAELIDNAVDEIQSGATFV
                     NIDKTINPRNGTAALLIQDDGSGMNPEAMRRCLSFGFSDKSSLSAIGKYGNGFKTSSM
                     RLGADVIVFSRNITNRKMTQSIGLLSYTFLTRECYNRIVVPMVCYEFNFVTESFDAIQ
                     SEGSDNSNLNMRMLLQWSPFSTEEELFKQFEDVGYHGTKVIVYNLWLDEDRNMELDFE
                     SDPEDIRITRDPIGKMTDSSRQAESEKHLANRLRYSLRAYLSILYLKLPETFAILLRG
                     KNVIYRNVATDLKYTEYIMYKPAEGSVITTIGFIKEAPLVNVHGFNVYHKNRLILPFC
                     PMVSFSRSRGRGVVGILEANFIEPTHDKQDFEKTSIYQKLVHRLKEMTWEYWDYHCGL
                     LGYYIFKKPRPPSAAPGASNFIHQHGTEQPVPFRRNSNAGHTTRKPPMITVINSKAAY
                     ESKSLPTPVEPNMSRGFPEGSNLKRKPSGQPAMFDSEARMEVNPNRVSIPPGSVSHDA
                     TNAIQENRMLRARLSEFNNLEEQLKLKVTHLNWELNQAQAEYARLLAELQYLEKVKLE
                     ATF"
     misc_feature    458..823
                     /gene="LOC139840173"
                     /note="Histidine kinase-like ATPase domain; Region:
                     HATPase; cl00075"
                     /db_xref="CDD:469604"
     misc_feature    order(509..511,521..523,530..532,608..610,614..616,
                     620..622,626..628,707..718,755..757,761..763,800..805,
                     809..811)
                     /gene="LOC139840173"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:340391"
     misc_feature    order(647..649,716..718)
                     /gene="LOC139840173"
                     /note="ATP-lid; other site"
                     /db_xref="CDD:340391"
     misc_feature    1184..1585
                     /gene="LOC139840173"
                     /note="Morc6 ribosomal protein S5 domain 2-like; Region:
                     Morc6_S5; pfam17942"
                     /db_xref="CDD:465579"
     polyA_site      2348
                     /gene="LOC139840173"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttttacatg ttcactgaat tcgtaccctg tttacaaaga aacgaattat aattaattat
       61 cggcgatcgc aaaaacccta aatttccacc ctttcttatt gaattgtgtt tgatttagct
      121 tctattagcg agtccggaaa gaaactgcaa acacactcct ttttgtccat gatcggaccc
      181 gaactcacaa ccaataccgc taggcctgaa gccctttggt taaactcatt ttgacttgaa
      241 ggtgaaaggt agaatgtcag atgcgaattg gatctctagt gggaccaacg tgttggatca
      301 aaaacagtca cttgatgatg caaacttttg ttcaacatca cccatttgtg cagcgcctat
      361 agttaggcaa ttttggaaag ctggagttta taatgatgaa cttactccta aatccacaac
      421 tcaatctggt tcaagttatc tacatataca cccaagattc cttcactcta atgctacttc
      481 tcacaaatgg gcttttggtg ctgtagcaga acttattgac aatgccgttg acgagataca
      541 aagtggggct acttttgtaa atatagataa aactataaac ccaagaaatg ggactgcggc
      601 attgttaatt caagatgatg gaagcgggat gaatcccgaa gcaatgcgcc gctgcctgag
      661 ttttggattt tctgataagt cgtcactatc agcgattgga aaatatggaa atggctttaa
      721 gaccagttcc atgaggcttg gagctgatgt catagttttc agccgcaaca ttactaacag
      781 aaaaatgacc caaagcattg gccttttatc atatacattt ttgactcgag aatgctataa
      841 cagaatagta gttcccatgg tatgctatga gttcaacttt gttacggaat cttttgatgc
      901 catacagtca gaaggtagcg ataactctaa tttgaatatg cgtatgttgt tgcaatggtc
      961 cccattctca acagaagagg aactatttaa acaatttgaa gatgttggtt atcatggcac
     1021 gaaagttatt gtttacaatc tatggcttga tgaggacagg aatatggagc ttgattttga
     1081 gtcagacccc gaggatattc gtattactcg ggatccaatt gggaaaatga cagatagttc
     1141 tcgtcaagca gaaagtgaaa aacatcttgc caaccggctc cgttattctc tccgtgcata
     1201 cttatccatt ttgtacttaa aactacctga aacttttgct attttattgc gcgggaaaaa
     1261 tgtcatctat cgtaatgttg ctacagactt gaagtacaca gaatacatca tgtataaacc
     1321 cgccgagggt tcagtgatta ctacgatagg ttttatcaag gaggctccac ttgttaatgt
     1381 ccatggtttt aacgtctacc acaaaaatcg gttaatactg ccattttgtc ccatggttag
     1441 cttttctaga agcagaggaa gaggtgtagt tggtattctt gaagcaaatt ttatcgagcc
     1501 tactcatgac aagcaagatt ttgagaaaac ttctatttac caaaaactag ttcaccgctt
     1561 gaaagaaatg acatgggagt attgggatta ccattgtgga ctgctcgggt attatatatt
     1621 caaaaaacct cgacccccgt cggccgcccc gggtgcttct aattttattc atcagcatgg
     1681 tacggaacaa cccgttcctt ttagaagaaa ctccaatgcc ggtcatacaa cgagaaaacc
     1741 accgatgata accgtcataa atagcaaggc ggcttatgag tcaaaatcct taccaacacc
     1801 agtagagcca aacatgtcta gaggtttccc cgaagggtca aacctgaaga gaaaaccaag
     1861 tggtcaacct gcaatgttcg attcagaggc tcgaatggag gttaatccta atagagtatc
     1921 aattccgcct ggttcggtta gtcatgacgc gacaaatgca attcaagaaa accgaatgct
     1981 tcgtgcccga ttatcagagt tcaataactt agaggaacaa ctaaaactta aggtgacaca
     2041 ccttaattgg gaactaaacc aagcccaagc ggagtatgct cgtctgctgg ccgagttgca
     2101 atacctggag aaagtgaagt tggaagcaac tttctgatgt gcttagttaa gtataagaga
     2161 atccgttttc tttgtaaacg tttacattgt aatataattt ttagtttcgg ccgtcaaaca
     2221 cccaaagcct aacctggttc cagtagctac aataaaatta tcagaatctt tcattattac
     2281 aacctgcttt attaatgtca aagaccagat gtaagcaaac tgtaatttaa gctccatatg
     2341 ttgttgta
//
LOCUS       XR_011757268            2154 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MICRORCHIDIA 6-like
            (LOC139840173), transcript variant X2, misc_RNA.
ACCESSION   XR_011757268
VERSION     XR_011757268.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2154
                     /gene="LOC139840173"
                     /note="protein MICRORCHIDIA 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840173"
     misc_RNA        1..2154
                     /gene="LOC139840173"
                     /product="protein MICRORCHIDIA 6-like, transcript variant
                     X2"
                     /db_xref="GeneID:139840173"
ORIGIN      
        1 cttttacatg ttcactgaat tcgtaccctg tttacaaaga aacgaattat aattaattat
       61 cggcgatcgc aaaaacccta aatttccacc ctttcttatt gaattgtgtt tgatttagct
      121 tctattagcg agtccggaaa gaaactgcaa acacactcct ttttgtccat gatcggaccc
      181 gaactcacaa ccaataccgc taggcctgaa gccctttggt taaactcatt ttgacttgaa
      241 ggtgaaaggt agaatgtcag atgcgaattg gatctctagt gggaccaacg tgttggatca
      301 aaaacagtca cttgatgatg caaacttttg ttcaacatca cccatttgtg cagcgcctat
      361 agttaggcaa ttttggaaag ctggagttta taatgatgaa cttactccta aatccacaac
      421 tcaatctggt tcaagttatc tacatataca cccaagattc cttcactcta atgctacttc
      481 tcacaaatgg gcttttggtg ctgtagcaga acttattgac aatgccgttg acgagataca
      541 aagtggggct acttttgtaa atatagataa aactataaac ccaagaaatg ggactgcggc
      601 attgttaatt caagatgatg gaagcgggat gaatcccgaa gcaatgcgcc gctgcctgag
      661 ttttggattt tctgataagt cgtcactatc agcgattgga aaatatggaa atggctttaa
      721 gaccagttcc atgaggcttg gagctgatgt catagttttc agccgcaaca ttactaacag
      781 aaaaatgacc caaagcattg gccttttatc atatacattt ttgactcgag aatgctataa
      841 cagaatagta gttcccatgg tatgctatga gttcaacttt gttacggaat cttttgatgc
      901 catacagtca gaaggtagcg ataactctaa tttgaatatg cgtatgttgt tgcaatggtc
      961 cccattctca acagaagagg aactatttaa acaatttgaa gatgttggtt atcatggcac
     1021 gaaagttatt gtttacaatc tatggcttga tgaggacagg aatatggagc ttgattttga
     1081 gtcagacccc gaggatattc gtattactcg ggatccaatt gggaaaatga cagatagttc
     1141 tcgtcaagca gaaagtgaaa aacatcttgc caaccggctc cgttattctc tccgtgcata
     1201 cttatccatt ttgtacttaa aactacctga aacttttgct attttattgc gcgggaaaaa
     1261 tgtcatctat cgtaatgttg ctacagactt gaagtacaca gaatacatca tgtataaacc
     1321 cgccgagggt tcagtgatta ctacgatagg ttttatcaag gaggctccac ttgttaatgt
     1381 ccatggtttt aacgtctacc acaaaaatcg gttaatactg ccattttgtc ccatggttag
     1441 cttttctaga agcagaggaa gaggtgtagt tggtattctt gaagcaaatt ttatcgagcc
     1501 tactcatgac aagcaagatt ttgagaaaac ttctatttac caaaaactag ttcaccgctt
     1561 gaaagaaatg acatgggagt attgggatta ccattgtgga ctgctcgggt attatatatt
     1621 caaaaaacct cgacccccgt cggccgcccc gggtgcttct aattttattc atcagcatgg
     1681 tacggaacaa cccgttcctt ttagaagaaa ctccaatgcc ggtcatacaa cgagaaaacc
     1741 accgatgata accgtcataa atagcaaggc ggcttatgag tcaaaatcct taccaacacc
     1801 agtagagcca aacatgtcta gaggtttccc cgaagggtca aacctgaaga gaaaaccaag
     1861 tggtcaacct gcaatgttcg attcagaggc tcgaatggag gttaatccta atagagtatc
     1921 aattccggta atacatcatt taaattaatt ggctttgtaa tttgtaatat tagcagtgga
     1981 gacgaaatca gaaatgtact ataaagaggg acaggttaaa agtgaccaaa aatctatgtt
     2041 taatgcatac tatctccata atcgttttat acgttatatt attcttttgt agcctggttc
     2101 ggttagtcat gacgcgacaa atgcaattca agaaaaccga atgcttcgtg cccg
//
LOCUS       XR_011757269            2036 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein MICRORCHIDIA 6-like
            (LOC139840173), transcript variant X3, misc_RNA.
ACCESSION   XR_011757269
VERSION     XR_011757269.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2036
                     /gene="LOC139840173"
                     /note="protein MICRORCHIDIA 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840173"
     misc_RNA        1..2036
                     /gene="LOC139840173"
                     /product="protein MICRORCHIDIA 6-like, transcript variant
                     X3"
                     /db_xref="GeneID:139840173"
ORIGIN      
        1 cttttacatg ttcactgaat tcgtaccctg tttacaaaga aacgaattat aattaattat
       61 cggcgatcgc aaaaacccta aatttccacc ctttcttatt gaattgtgtt tgatttagct
      121 tctattagcg agtccggaaa gaaactgcaa acacactcct ttttgtccat gatcggaccc
      181 gaactcacaa ccaataccgc taggcctgaa gccctttggt taaactcatt ttgacttgaa
      241 ggtgaaaggt agaatgtcag atgcgaattg gatctctagt gggaccaacg tgttggatca
      301 aaaacagtca cttgatgatg caaacttttg ttcaacatca cccatttgtg cagcgcctat
      361 agttaggcaa ttttggaaag ctggagttta taatgatgaa cttactccta aatccacaac
      421 tcaatctggt tcaagttatc tacatataca cccaagattc cttcactcta atgctacttc
      481 tcacaaatgg gcttttggtg ctgtagcaga acttattgac aatgccgttg acgagataca
      541 aagtggggct acttttgtaa atatagataa aactataaac ccaagaaatg ggactgcggc
      601 attgttaatt caagatgatg gaagcgggat gaatcccgaa gcaatgcgcc gctgcctgag
      661 ttttggattt tctgataagt cgtcactatc agcgattgga aaatatggaa atggctttaa
      721 gaccagttcc atgaggcttg gagctgatgt catagttttc agccgcaaca ttactaacag
      781 aaaaatgacc caaagcattg gccttttatc atatacattt ttgactcgag aatgctataa
      841 cagaatagta gttcccatgg tatgctatga gttcaacttt gttacggaat cttttgatgc
      901 catacagtca gaaggtagcg ataactctaa tttgaatatg cgtatgttgt tgcaatggtc
      961 cccattctca acagaagagg aactatttaa acaatttgaa gatgttggtt atcatggcac
     1021 gaaagttatt gtttacaatc tatggcttga tgaggacagg aatatggagc ttgattttga
     1081 gtcagacccc gaggatattc gtattactcg ggatccaatt gggaaaatga cagatagttc
     1141 tcgtcaagca gaaagtgaaa aacatcttgc caaccggctc cgttattctc tccgtgcata
     1201 cttatccatt ttgtacttaa aactacctga aacttttgct attttattgc gcgggaaaaa
     1261 tgtcatctat cgtaatgttg ctacagactt gaagtacaca gaatacatca tgtataaacc
     1321 cgccgagggt tcagtgatta ctacgatagg ttttatcaag gaggctccac ttgttaatgt
     1381 ccatggtttt aacgtctacc acaaaaatcg gttaatactg ccattttgtc ccatggttag
     1441 cttttctaga agcagaggaa gaggtgtagt tggtattctt gaagcaaatt ttatcgagcc
     1501 tactcatgac aagcaagatt ttgagaaaac ttctatttac caaaaactag ttcaccgctt
     1561 gaaagaaatg acatgggagt attgggatta ccattgtgga ctgctcgggt attatatatt
     1621 caaaaaacct cgacccccgt cggccgcccc gggtgcttct aattttattc atcagcatgg
     1681 tacggaacaa cccgttcctt ttagaagaaa ctccaatgcc ggtcatacaa cgagaaaacc
     1741 accgatgata accgtcataa atagcaaggc ggcttatgag tcaaaatcct taccaacacc
     1801 agtagagcca aacatgtcta gaggtttccc cgaagcctgg ttcggttagt catgacgcga
     1861 caaatgcaat tcaagaaaac cgaatgcttc gtgcccgatt atcagagttc aataacttag
     1921 aggaacaact aaaacttaag gtgacacacc ttaattggga actaaaccaa gcccaagcgg
     1981 agtatgctcg tctgctggcc gagttgcaat acctggagaa agtgaagttg gaagca
//
LOCUS       XM_071830403            3452 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            SEC15A-like (LOC139840174), mRNA.
ACCESSION   XM_071830403
VERSION     XM_071830403.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3452
                     /gene="LOC139840174"
                     /note="exocyst complex component SEC15A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840174"
     CDS             163..2526
                     /gene="LOC139840174"
                     /codon_start=1
                     /product="exocyst complex component SEC15A-like"
                     /protein_id="XP_071686504.1"
                     /db_xref="GeneID:139840174"
                     /translation="MNPKMSSRNVKENGDTVEDSILMTLIGNGDDLAPMVRHSFEMGK
                     PEALVHQLKYVVKKKEVEIEELCKLHYEEFIVAVDELRGVLVDAEELKGELASDNFRL
                     QEIGSELLLRLEDLLESYSIKKNVTEAVKMSMICVKVLDLCIKCNKHVSEGQFYPALK
                     AIDLIEESYMKSIPVKTLKNLVEKKVPVIKTHIEKKVCGEINEWLVQIRSTSKHIGQK
                     AIGFASSARQKNEDMLARQKKAEEESSLGLGDFTYSLDVEDIDESSVLQINLMPLYRA
                     YYIHICLGLGDKFREYYYKNRMLQLSSDLQVSVQHFLGSHQTYLAQIAGYFIVEDRVL
                     RTAGDLLSANQVESMWETAVNKMTLTLESQFSQMDNASHLLLVKDYVTLLGSTLRQYG
                     YDVGPILEALTNSRDKYHELLLTECRVQIKDAIVNDSCQQMVMKESEYQSNVVCFHLQ
                     TSDLVPAFPYVAPFSSMVPDCCRIVRSFIKDSVNYLSYGGQTNFFDFARKYLDKLLID
                     VLNEVLLSTIKNGNTGVSQAMQISANIAFLERACDYFLQTASKQCGVPTRMVARPGTT
                     LMAKTVLKTSRDESYLALLDLVDCKLTEYLALNENVNWIIDDVAQHKSDYMNEVVVYL
                     DTLLSTAQQILPLDVMYKIGNGALEHVNNSFMNTLLSDTLKRFTANAVMGINDDIKTL
                     EQFADDKFHGTGLSEIYKEGSFRGCLLEIRQLVNLLLSSQPENFMNPVIRMKNYNTLD
                     YKKIGIICEKYKDSPDGIFGSLSNRGGKQSNRKKSMDVLKRRLKEFN"
     misc_feature    1480..2412
                     /gene="LOC139840174"
                     /note="Exocyst complex subunit Sec15-like; Region: Sec15;
                     pfam04091"
                     /db_xref="CDD:461169"
ORIGIN      
        1 atttttaatc cccaatattg tgatcatcgt ctgtttctag ggttcttttt atcacatcac
       61 atcttctaat cgaacaaatt cgaattttaa tcataaataa cgcaaggatt cgctgtccta
      121 taatttcagt aggtttatat attgcagttt ttgagtgtaa agatgaatcc aaaaatgagc
      181 tcaagaaatg ttaaagaaaa tggggacaca gttgaagatt caatacttat gactttaata
      241 ggcaatggtg atgatttagc tcctatggta aggcattcat ttgaaatggg gaaacccgaa
      301 gctctcgttc accagctcaa atacgttgtg aagaagaagg aagttgagat cgaggagctc
      361 tgcaaactcc actacgaaga atttattgtt gcagtcgatg agcttcgtgg tgttcttgtt
      421 gatgccgaag agttgaaagg tgagcttgcg agtgataatt ttaggttaca agaaataggg
      481 agcgaattac ttttaagact cgaagatctg cttgaatcat attctattaa gaaaaatgtt
      541 actgaagcgg ttaaaatgtc gatgatatgt gttaaagtgt tggatctttg tataaagtgt
      601 aacaaacatg tatcggaagg tcagttttac cctgcgttaa aagctattga tctgatagag
      661 gaaagttata tgaagagtat tcctgttaag acgcttaaaa atctagtgga gaagaaagtc
      721 ccggtaataa aaacgcatat cgaaaaaaaa gtttgtggtg aaattaacga atggctggtt
      781 caaatacgga gcacatcgaa acatatcggg cagaaagcaa tcggatttgc gtcgtctgct
      841 cgtcagaaaa acgaagatat gcttgcacgt cagaaaaaag ctgaagaaga aagttcatta
      901 ggtctcgggg attttactta ttcgttagac gttgaagata ttgacgaaag ttctgtttta
      961 caaattaatc ttatgcctct ttatcgcgcg tactatatcc atatatgtct tggattaggt
     1021 gataagtttc gggaatatta ctataaaaac cgtatgttgc aactgagttc agacctgcag
     1081 gtttcggttc aacattttct tggatcgcat cagacttact tggcacagat cgctggctac
     1141 tttattgttg aggatcgggt tcttaggaca gctggcgact tattatcggc taatcaggtt
     1201 gagtcaatgt gggaaacagc tgtaaataag atgacgttga ctttggaaag tcaattttct
     1261 caaatggata acgcgagtca tctgcttctt gtgaaagact atgtgacgct tcttgggtcg
     1321 accctgagac aatatgggta tgatgtgggc ccgattcttg aagctttgac caatagtcgt
     1381 gacaaatatc atgaacttct tttaacagaa tgtcgagttc aaatcaaaga cgccatcgtt
     1441 aatgacagct gtcagcaaat ggttatgaaa gagtctgaat accagtcaaa cgttgtctgt
     1501 tttcatcttc aaacctcgga tttagtacct gctttcccgt acgttgcgcc tttttcatca
     1561 atggtccccg attgttgtcg aatagttagg tcgtttatta aggattcggt taattacttg
     1621 tcgtacgggg gtcaaacaaa cttctttgac ttcgcacgaa agtatctcga caagttgttg
     1681 attgatgttt taaatgaagt tttacttagc actattaaaa acgggaacac gggtgtatct
     1741 caagcaatgc aaatttctgc gaatatagcg tttttagaac gcgcgtgtga ttatttcctt
     1801 caaaccgcat cgaaacaatg tggggtcccc actcgaatgg ttgcaaggcc cgggactact
     1861 ctaatggcta aaacggttct caagacttca cgggacgaat cgtatctcgc tcttttggat
     1921 ttggtcgatt gtaagttgac cgagtatctg gcacttaacg agaacgtgaa ttggatcata
     1981 gatgatgtgg cgcaacataa aagtgattac atgaatgagg ttgttgttta tctcgacact
     2041 cttttatcaa ctgctcagca gattttacct cttgacgtca tgtataaaat cggtaatgga
     2101 gcccttgagc atgttaataa ctcgtttatg aacactcttt taagtgatac gttaaaacgg
     2161 ttcactgcaa atgcagtaat gggtataaac gacgacatta aaactttaga acagtttgca
     2221 gacgacaagt ttcatggtac tggattaagc gaaatatata aagaaggaag tttcagaggc
     2281 tgtttgctag aaataagaca attggttaat cttttattga gtagtcagcc tgaaaatttc
     2341 atgaatcctg ttatacgtat gaagaattac aacacgttgg attacaaaaa aattggaatt
     2401 atatgcgaga aatataaaga ttcacctgat ggaatattcg ggagcctttc gaacagaggt
     2461 ggaaagcaga gtaatcgtaa gaagtcaatg gacgttttaa agagacgatt gaaggagttt
     2521 aattaagaat tatatcaaag ttttgctgag tataataagc caatttcgat cttttgtatt
     2581 ttcttgtttc atctatttta agccaatttt tgtggctgat agcttacata agttatctag
     2641 ttcctcatat attattcatg aaacagtatc atatattggt ctttgtttca gttataatga
     2701 tgaagcctat aagattacca tgtttagttg tgcattctct taaccatccc aatatagtct
     2761 agtggttggg ttctgatatc ctcacaggtc ttaggttcga acttcaatag ggcatatttc
     2821 gggctggcca gataaaaggg tcgaaaacgc tcactggata acccagttag gccgcgtact
     2881 tctgagtaat ctgagtaaag atactccttt cttcaggtag cctgaagaat gatagttgtg
     2941 cattctttta taagaatgat agttatattc ctagctctaa tggtgacatg acacttgcag
     3001 gcaagaccta taaatttggc gtttgactac tattctgtgc aggtaagttt cggattgact
     3061 ttctgcggta tttgtgatcg gattcaaata ctgctgattc tagattacaa gattttggag
     3121 atacatcgat gttcgtgaat ctagagatga cggtgaagga tgctacgttc aaactgtaaa
     3181 cattggaaga atccatatat tatatattaa taatatatat tttagaagtt aaaacgagaa
     3241 tgacaaaaag gtacaattac aaaaagtttt tgaactataa gaattttcac atgttagtag
     3301 attcattcac attcaaatat agatgcagat taacgtttat agcaaaagta gtcggacgaa
     3361 ctactatagt gtctggtgac tactagccta ctaggtatgg cagtctttcc gagcgagcct
     3421 ttgttatcaa taacttaaat caaattgcaa tt
//
LOCUS       XM_071830404             940 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides photosynthetic NDH subunit
            of subcomplex B 5, chloroplastic-like (LOC139840175), mRNA.
ACCESSION   XM_071830404
VERSION     XM_071830404.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..940
                     /gene="LOC139840175"
                     /note="photosynthetic NDH subunit of subcomplex B 5,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139840175"
     CDS             91..774
                     /gene="LOC139840175"
                     /codon_start=1
                     /product="photosynthetic NDH subunit of subcomplex B 5,
                     chloroplastic-like"
                     /protein_id="XP_071686505.1"
                     /db_xref="GeneID:139840175"
                     /translation="MAGVSLSTLSIAPIPKITTKFEQYTNRINKVSSTDEICSTSFGG
                     IRYKRNQNNGCNRKGIRRLNAAGLTDIEPDLNEDPVDRWDNSGISNDDFVYGVYDGHH
                     TYNEGDDKSTFWGSIAEDYAAIDPPNGFQGLISWLFLPSVALGMYLNVPGEYLYIGAA
                     IFVVIFCIIEMDKPSEAYNFEPQIYNMERGARDKLISDYNTMDIWDFNEKYGELWDFT
                     VNNDDIVKR"
     polyA_site      940
                     /gene="LOC139840175"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaagtatca ccaatgagtg acatgagcat catctctgag ttagaaactg aaaatctcaa
       61 aggccacaca atttagaacc caaacaaaaa atggcggggg tttcactctc aacattatcc
      121 attgctccaa tccccaaaat cactactaaa ttcgaacaat atacaaacag aatcaacaag
      181 gtttcatcaa ctgatgaaat ttgttccact tcatttggtg gtatcagata taaaagaaac
      241 caaaacaatg gatgtaacag aaaggggata aggagattga atgctgctgg tttaactgat
      301 atcgaacctg atctcaatga agatcccgtt gatcgatggg acaatagtgg tatcagtaac
      361 gatgattttg tttacggagt gtatgatgga caccacacat acaatgaagg agatgacaaa
      421 tcaacatttt ggggatcaat agcagaagat tatgcagcaa ttgatcctcc taatggattt
      481 caaggtctca tttcatggct atttcttccg tctgtggctc tcgggatgta cctcaatgtt
      541 ccgggtgagt acttgtacat aggggcggcc atattcgttg taatattttg tataattgag
      601 atggataaac caagtgaggc gtacaacttc gagccacaaa tatataacat ggagaggggt
      661 gctcgagata agttaatatc agactacaac accatggata tttgggactt caatgaaaaa
      721 tacggtgaac tttgggattt caccgtaaac aatgatgata ttgtgaaaag ataaatatct
      781 gtatcatctt atttgattgt caagttctta tggaagaacc tcacctcata tacatggaaa
      841 atctattttt atttttttgg atttgtggtg gtaaaaactc tgtatccata tgtatacatg
      901 taataaattc tataaggtat gtttgttatt gcttctgata
//
LOCUS       XM_071830405            2392 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bZIP transcription factor
            17-like (LOC139840176), mRNA.
ACCESSION   XM_071830405
VERSION     XM_071830405.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2392
                     /gene="LOC139840176"
                     /note="bZIP transcription factor 17-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139840176"
     CDS             84..2252
                     /gene="LOC139840176"
                     /codon_start=1
                     /product="bZIP transcription factor 17-like"
                     /protein_id="XP_071686506.1"
                     /db_xref="GeneID:139840176"
                     /translation="MADDPTAIADPHSALPIPPLDSYGFSDDLTLSEDYLSFVNDDFD
                     ITFDDVQLPSDTGDFFNSAFNSSNPIDLSSSDPEFNDFASDHETIAVESGNLFESQLN
                     DCNHVSDVSGYLNISSPDDLLPEVAMNLENSLPESRNENPVSSQGSGNCGSAGSHVMN
                     CDNFDSSDNCASPDSGNSVVEQKIKCELGNNFLLKRKSESSDVNSESRTNKYRKSNEN
                     SVTTNDNSNQGDEKDEKKKARLIRNRESAQLSRQRKKHYVEELEDKVRAMHSTIQDLN
                     ARIMHFAAENATLKQQMVAGAGGGVGGGVCPPHVMYPPHPAMAPMGYPWMPCPPYVVK
                     SQGSQVPLVPIPRLKPQSQQPASSHKSKKTDVKKTEGVTTTKSKTKTKKVASISFLGL
                     LLFIVMFGGLVPIMNVRFNGASISDSGYNGVSSDYKFYNQTGRVLMGDEHVNGSNHRT
                     GIGSERNDSEPLVASLYVPRNDKLVKIDGNLIIHSVLASEKAMASREEQGTSKKEDTG
                     LAVALDLVPAISVSSVGRNGGRQPHMYRTSSDRQRALPSDKENVKSKHADGKLQQWFR
                     EGLAGPMLSSGMCTEVFQFDVSAASNSGAIVPATSVVNMTTENSHNSTYINTVKNRRI
                     LHGLPIPLSGSTTNVTKEKVSGHDTKDEDHHKNGSVSSMVVSVLFDPREAGDAGDVNN
                     RMGGGKSFSRIFVVVLLDSVKYVTYSCMLPLKGASHLVTA"
     misc_feature    789..944
                     /gene="LOC139840176"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     Elongated/Long Hypocotyl5 (HY5)-like transcription factors
                     and similar proteins: a DNA-binding and dimerization
                     domain; Region: bZIP_HY5-like; cd14704"
                     /db_xref="CDD:269852"
     misc_feature    789..944
                     /gene="LOC139840176"
                     /note="coiled coil [structural motif]; Region: coiled
                     coil"
                     /db_xref="CDD:269852"
     misc_feature    order(798..803,807..815,819..836,840..848)
                     /gene="LOC139840176"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269852"
     misc_feature    order(843..845,852..857,864..869,873..878,885..890,
                     894..899,906..911,915..920,927..932,936..941)
                     /gene="LOC139840176"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:269852"
ORIGIN      
        1 cacatacaat aaataaaata cgtttctctg tttttctaga attgtctatt ccgacgacca
       61 tcacatcaca ttaaacccta attatggcag acgacccgac ggccatagcc gatcctcatt
      121 ctgcgctacc aattccgccg ctagattcat acggtttctc cgacgacctc acattatccg
      181 aagattacct ctcattcgtc aacgacgact tcgatatcac ttttgacgat gttcaacttc
      241 cgtccgatac cggagatttt ttcaattcag cttttaattc ttcaaatccg atcgatctat
      301 cgtcttctga tcccgaattc aacgatttcg cttctgatca tgaaactatc gctgtggaat
      361 caggtaattt gtttgaatct cagttaaatg attgtaatca cgtttcggat gtttctggat
      421 acctaaatat atcgtctcct gatgatttgt tgccggaagt ggcgatgaat ttggagaact
      481 cgttgccgga atcgagaaat gagaatcctg tgtcgtctca aggttccggt aattgcggtt
      541 cggctggatc gcatgttatg aattgtgata attttgatag tagtgataat tgtgcatcac
      601 ctgattctgg taattcggtt gttgagcaga aaataaagtg tgaattaggg aataattttc
      661 tgttaaagag gaaaagtgag agcagtgatg taaattcgga gtctagaacg aataagtatc
      721 gaaaatcgaa tgagaattcg gttacaacga atgataattc aaatcaaggt gatgaaaagg
      781 atgagaaaaa gaaagctagg ttaattagaa accgcgaaag tgctcagctt tcgagacaaa
      841 ggaaaaaaca ttatgttgag gagttggagg ataaggtaag agcaatgcat tcaactattc
      901 aagatttaaa cgctagaatt atgcactttg ctgcagaaaa tgcaacttta aagcaacaaa
      961 tggttgctgg tgctggtggt ggtgttggtg gtggtgtgtg tccgcctcat gtaatgtatc
     1021 cgccacatcc tgccatggcg cccatgggtt atccatggat gccgtgcccg ccgtatgttg
     1081 ttaaatctca gggttctcag gtcccgttgg ttccgattcc tagattgaag ccacaatcac
     1141 aacaacctgc gtcttcgcac aaatcgaaga agactgatgt taagaaaact gaaggcgtaa
     1201 ctacaactaa atctaagacg aaaactaaaa aagttgctag tatcagtttt cttggattgt
     1261 tgctatttat tgttatgttt ggtgggttgg ttccgattat gaatgtgaga tttaatggag
     1321 caagcatatc ggatagtggt tataatggtg tctctagtga ctataagttt tataatcaga
     1381 ctgggagggt gctgatgggt gatgaacatg tgaatggaag taatcataga acagggatag
     1441 gtagtgagcg taacgatagt gagcctcttg ttgcatctct ttatgtgcca aggaacgata
     1501 agcttgtgaa aattgatggt aatttgataa tacattctgt tttagcaagt gagaaagcaa
     1561 tggcatctag ggaagaacaa ggaacaagta aaaaggaaga tacgggtttg gcagttgcct
     1621 tagatttggt tcctgctatc tctgtttctt cagtaggaag aaatggtgga agacagccac
     1681 atatgtatag gacttcgagt gatcgtcaaa gggctcttcc atctgataag gaaaatgtga
     1741 agtcgaaaca tgctgatggt aaactgcaac agtggtttcg tgaaggactt gctgggccta
     1801 tgttgagttc aggcatgtgc accgaagtct tccagtttga tgtgtctgcg gcctcaaatt
     1861 caggagccat tgttcccgcc acatcagttg tcaatatgac tacagaaaac agccacaact
     1921 caacctatat caacaccgtg aagaacagac gaattctaca tggtctacca ataccccttt
     1981 ctggttccac caccaacgtc acaaaagaaa aagtgtcggg tcacgacaca aaagacgagg
     2041 accatcacaa aaacggctca gtttcatcaa tggtggtttc agtccttttt gaccctcgtg
     2101 aggctgggga cgctggtgac gtgaataaca ggatgggtgg tggcaagtca ttttcgcgga
     2161 tatttgtggt ggttttgtta gacagtgtta agtatgtgac ctactcttgc atgcttccat
     2221 tgaaaggggc tagtcattta gtaacagctt aaagtatgga agttttgtag ataagagttg
     2281 aagtttattt atgggaatga atgtgttgta tttctgaagt tataatggtg taagtcatct
     2341 aatcttcttc taatctctaa ttaacataat ataataaata tcgcagtttg tt
//
LOCUS       XM_071830406            3454 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nonsense-mediated mRNA decay
            factor SMG7-like (LOC139840178), mRNA.
ACCESSION   XM_071830406
VERSION     XM_071830406.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3454
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3454
                     /gene="LOC139840178"
                     /note="nonsense-mediated mRNA decay factor SMG7-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 12 Proteins"
                     /db_xref="GeneID:139840178"
     CDS             196..2865
                     /gene="LOC139840178"
                     /codon_start=1
                     /product="nonsense-mediated mRNA decay factor SMG7-like"
                     /protein_id="XP_071686507.1"
                     /db_xref="GeneID:139840178"
                     /translation="MTIPMNNTLDNSSRERAQRLYNKNAELESKRRKAAQAKIPSDPN
                     AWQKMRENFEAILLEDHEFSEQHDIEYALWQLHYKRIEEFRAHYSAAQASTTQNVKGP
                     ARPGLDRITKIRSQFKTFLSEATGFYHDLMVKIRAKYGLSLSYMPDDLQNDGNKSVEL
                     KKGLISCHRCCIYLGDLARYKGLYGEGDSKTLDFDAASSYYKQAATLWPSSGNPHHQL
                     AILASYSGDELLAVYRYFRSLAVDTPFTTARENLIIAFEKNRQSYVQLIGESKPAPTK
                     KTPTRVNGKGRNKVESRVSVKDRRTEPIVVEEKERTVPETLKAFTTRFVRLNGILFTR
                     TSLETFEEVFSVARNELLQLLAFGHDEVLNFGLEFNECKLFITRFIAIMIFTVYNATK
                     ETEHQSYAEILQRAVVLQNAFTAIFDFMALIVDRCFQLNDPSRSFLLPGIMIFVEWLA
                     CCQGAVVNNEMDEKQATARTLFWNHFVSFLNKISSSGSHGSEDETCFFNMSRYDEGET
                     ASRLALPEDIELRGFLPVVPAHVILKFSGTNYFGNKENNARMQRIIAAGKAITTNFQT
                     GEQGIYFDSKSKRFVFGVVPQIVNEVSVTNGESEEEDEVIVFKPPVFEKNKDVFPSKL
                     VSSEGTFGNVTTYVEPTASSVSKNMQYVQFAQPNTSKWMAGVEESIENGFQNLNLSGN
                     GFSTRPETEISSGIIKKSDGFSSFNEQSFQDTATMIPSQFDSVMTSAPGLDSLPSKTK
                     FHKNPVGRPVRHLGPPPGFNTGPVIGGNVRNENTIPALDDYSWLDGYQLPSYLSYNDG
                     FGNSLNCLPQPNKLLNTNKTSLGMESFPFPGKQVSSVAANNGNGKQNGWLDYQIPERS
                     NAYQGPGKKGNEQFIAASQQYQAQSLWEGRFFV"
     misc_feature    397..750
                     /gene="LOC139840178"
                     /note="Telomerase activating protein Est1; Region: EST1;
                     pfam10374"
                     /db_xref="CDD:463062"
     misc_feature    697..813
                     /gene="LOC139840178"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(700..702,709..714,721..726,730..732,832..834,
                     841..846,853..858,862..867,934..936,943..948,955..960,
                     967..969)
                     /gene="LOC139840178"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    784..1785
                     /gene="LOC139840178"
                     /note="Est1 DNA/RNA binding domain; Region: EST1_DNA_bind;
                     pfam10373"
                     /db_xref="CDD:431239"
     misc_feature    826..918
                     /gene="LOC139840178"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     polyA_site      3454
                     /gene="LOC139840178"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attctacacc gctgttcgta caaccatcgt caaatcaaaa ctgaacgctt tcattaatcg
       61 atccgtatat ctcatttaag gcgattcgtt gtaaatttcg tcgcgattcg ttcagatctg
      121 attctgaata gttggatact gctgttcgaa tcagatcttt tggaatcaat ttcagttatc
      181 tctgtttgat ggacgatgac tattccaatg aataacactc tggataattc gtctagggaa
      241 cgtgctcaac gtctttacaa caagaatgct gagctggaaa gtaagcgtag aaaagcagca
      301 caagcaaaaa ttccatcaga tcccaatgct tggcagaaaa tgcgagaaaa tttcgaggca
      361 attcttcttg aagaccatga attctctgaa cagcatgata ttgagtatgc attatggcag
      421 ttgcattaca agcgtatcga ggagtttcgt gcacactata gtgctgctca agcttctaca
      481 acacaaaatg ttaaaggtcc tgcacggccg gggctcgacc gaatcaccaa aattcgttcc
      541 caatttaaga ccttcctctc agaagctact ggtttctatc atgatttgat ggtgaaaatc
      601 agggcaaagt atggcttgtc actgagttat atgccagatg atttacaaaa tgatgggaac
      661 aaatctgttg agttgaagaa aggtttgata tcgtgccatc gatgttgtat atatctaggg
      721 gatcttgctc gttacaaggg tttatatggt gagggtgact cgaaaaccct agattttgat
      781 gcagcatcga gctactataa gcaagctgct accctttggc cttcaagtgg taatcctcat
      841 catcagcttg ctatattggc ttcatactct ggagatgaac tgttggctgt ttaccgttat
      901 tttcgaagtt tagcagttga tacccctttt actaccgcta gagaaaatct gataattgcg
      961 tttgaaaaga atcgtcaaag ttatgttcag ctgatcgggg agtcaaaacc tgctcctact
     1021 aagaagacac caacacgggt gaatggtaaa ggaagaaaca aagtcgaatc acgggtatct
     1081 gttaaggata ggagaacaga accgattgtt gtcgaggaaa aagaacgtac tgtccctgaa
     1141 actcttaaag ccttcactac tcgatttgtg agactaaatg gcattctttt tactcgtaca
     1201 agtttggaga catttgaaga agtattctcg gtggcccgaa acgagctcct tcagctacta
     1261 gctttcggac acgatgaagt cttgaacttc ggtttggaat ttaatgagtg caaactcttc
     1321 ataactaggt tcatagcaat catgatattt accgtctaca atgcaaccaa ggaaaccgaa
     1381 catcaatcgt atgctgagat tcttcaacgt gctgttgtgc ttcagaacgc atttactgcc
     1441 atatttgatt tcatggccct catagttgac cgatgcttcc aactgaatga tccttctaga
     1501 agcttcttac ttcctggcat catgattttt gtcgaatggc ttgcttgttg tcagggtgca
     1561 gttgtcaata atgaaatgga tgagaaacaa gcaaccgcta gaaccctgtt ttggaatcat
     1621 tttgtttctt tcctcaacaa aatatcatcg agtgggtccc atggtagtga agacgaaaca
     1681 tgttttttca acatgagtag gtacgatgaa ggtgaaacgg caagtcgtct cgctttgccc
     1741 gaggacattg agcttagggg atttttacct gttgttcctg ctcatgttat tctcaagttt
     1801 tcgggaacga attattttgg aaataaagaa aataatgctc gaatgcagcg aattatagca
     1861 gccggtaagg cgattacaac taacttccaa actggagaac aaggaatcta ttttgattca
     1921 aaatctaaga gatttgtttt tggggtggtc ccacaaattg ttaatgaagt ttctgttaca
     1981 aatggagaaa gtgaagagga agatgaggtt attgtcttta aaccccctgt ttttgagaag
     2041 aataaagatg tttttccttc aaaacttgtg tcatctgagg gtactttcgg gaatgttact
     2101 acttatgtgg agcccactgc atcctctgtc agtaaaaata tgcaatatgt gcagtttgca
     2161 caaccaaata catcaaaatg gatggctgga gttgaagaaa gtattgaaaa tggttttcaa
     2221 aatctcaact tgtcggggaa tggattttca acgaggcccg agacggaaat tagctcagga
     2281 atcatcaaaa agtctgatgg ttttagttct ttcaatgaac aatcttttca ggatactgca
     2341 actatgatac catcccagtt tgattctgtt atgacatcag cacctggttt ggacagcctc
     2401 ccatcaaaga caaagtttca taagaaccca gtgggccgac ccgtcaggca tttgggccca
     2461 ccacccggct ttaacactgg gcccgtgatt ggtggtaatg taaggaatga gaatacaatt
     2521 ccagctttgg atgactatag ttggctcgat ggctaccaat taccttctta tttatcctac
     2581 aatgatggat ttggtaattc tttgaattgc ttgcctcaac caaacaagct tttgaacaca
     2641 aacaagactt cgttgggaat ggaaagcttt ccatttcccg gtaaacaggt ttcgtctgta
     2701 gcggctaaca atggaaacgg aaagcaaaac ggatggcttg attatcagat ccctgaacgt
     2761 tcaaatgctt atcaaggacc aggtaaaaaa ggtaatgaac agtttattgc agcgtctcag
     2821 caatatcaag cacaatcatt gtgggaaggt cgtttctttg tgtgaagatg attatggagc
     2881 atagatggtt atgaacaatc tactaagatg gatgatgtga agtggcttgg tacgaccggt
     2941 tcagccatca gatatatgtc atgtggctgt cgtttaaagc ttttaatgga gctacaatgg
     3001 agatatgatt tggattattg caggcacctg tttgattaat aggtgccgag ttttccagaa
     3061 tgaatgaaat attttgtgag aagtgattaa agtgaagaaa ttggtaattt gtcgcttggc
     3121 ttttggattg tgtggattaa taaggaggat gtagcaacga aaaatatggt tgaattgttg
     3181 aacaatacta cactactact actacttagt agcttatcct actgcttttt aaagttttcc
     3241 tctgatagaa gggtacgttg ggatttcgtc ttcttcgtac cttctactat ttggcatttt
     3301 tttttttttt ccttcttatc tttgttaagt tctgtttgaa taaaaacctg tgtggatgtc
     3361 tgacagtccg ggtaaacaga taattttttg tttgtttggt atgatgaata aattgtcagg
     3421 atatatatct atataaacta catttttgtt ttaa
//
LOCUS       XM_071830407            1675 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-glycosyltransferase
            89B2-like (LOC139840179), mRNA.
ACCESSION   XM_071830407
VERSION     XM_071830407.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1675
                     /gene="LOC139840179"
                     /note="UDP-glycosyltransferase 89B2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139840179"
     CDS             4..1401
                     /gene="LOC139840179"
                     /codon_start=1
                     /product="UDP-glycosyltransferase 89B2-like"
                     /protein_id="XP_071686508.1"
                     /db_xref="GeneID:139840179"
                     /translation="MPITGINNGDHILVFPYPAQGHMLSLLDLTHQLAIRGVQITILV
                     TPKNLPILTPLLSAHPATITTLVLPLPPHPAIPSGIENAKDLPGGGFPAMIVALGDLY
                     NPIKDWFQNHHNPPVAIVSDLFLGWTHRLAVELGVRRYCFSPCGALAISIMFYLWKYQ
                     PKRVDTKNENEVIKFSKIPNSPEFPWWQISPMYRSYLEGDATLVFIKDVFVDNMASWG
                     VIINSFTELEGVYVEYLKIELGHDRVFAVGPLLPPPDSKLMERGGPSSRDVLSWLDTC
                     DDHTVVYICFGSQIVLTNNQMEAVALGLEKSGVKFVWSVKEPTVGHVAGDYGKIPGGF
                     EDRVAGRGFVVKGWAPQVAILNHHSVGAILFHCGWNSIMEAVVSDVLLLTWPMGTDNY
                     SNAKLLHELKVGIKACVGAETIPDSEEFAELFRKSVSEDTQVERERAKEFARAAKEGI
                     GENGSSIKKLNNLFT"
     misc_feature    4..1392
                     /gene="LOC139840179"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(64..69,73..75,508..510,517..522,550..552,637..639,
                     865..867,1099..1101,1105..1107,1111..1116,1123..1125)
                     /gene="LOC139840179"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(64..66,865..867,1099..1101,1105..1107,1111..1116)
                     /gene="LOC139840179"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    67..69
                     /gene="LOC139840179"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 aatatgccaa taaccggaat caataacggc gatcacatct tggtgttccc atacccagct
       61 caaggtcaca tgttatcact tcttgatctc acacatcaat tagcaattcg tggcgtacaa
      121 attaccatcc tagtcacacc aaaaaacttg cccattttaa ctccactact ttccgcccat
      181 ccagccacca tcactaccct cgtcctcccc ctaccacccc accctgccat cccttccggt
      241 atcgagaacg ctaaagactt accaggtgga ggttttcctg ccatgatagt tgctttaggt
      301 gatctttata accctattaa agattggttt caaaaccatc acaatccgcc tgttgcgatc
      361 gtgtcagacc tctttttggg ttggacccac cggcttgcgg tcgagctcgg tgttcgccgg
      421 tattgttttt caccatgcgg tgcgttggct atttctatca tgttttattt gtggaaatac
      481 caacctaaaa gagttgatac aaaaaatgaa aatgaagtaa taaagtttag taaaattcca
      541 aattcacccg aattcccttg gtggcaaata tctccaatgt accgaagtta tttagaagga
      601 gatgcaactt tggtttttat taaagacgta tttgtagata atatggcgag ttggggagtc
      661 attattaact cgtttaccga gttggaagga gtttacgttg agtatttgaa aattgaattg
      721 ggccatgacc gcgtgtttgc agttgggcca ttactccctc ctcctgatag taaactcatg
      781 gagagaggtg ggcccagctc aagggacgtg ttatcgtggc ttgacacgtg tgatgatcac
      841 acggttgtat atatttgttt tggaagtcaa atagtgttga ccaataatca aatggaagcc
      901 gtggcactgg gattggagaa aagtggggtc aagtttgtat ggtcggtgaa ggagccgact
      961 gttggacacg tggcaggaga ttatggtaaa atcccgggtg ggtttgaaga tcgtgtggct
     1021 ggaaggggtt ttgtcgttaa agggtgggct ccacaagtgg cgatactaaa tcatcactct
     1081 gtaggtgcga ttctgtttca ttgtgggtgg aattcaatta tggaagcagt agtgtcggac
     1141 gttttgttgc ttacgtggcc aatgggtact gataattact caaatgcgaa gttgttgcat
     1201 gagttaaaag tgggaattaa agcgtgtgtg ggagccgaga caattcctga ctcagaagag
     1261 tttgccgagt tgtttaggaa atcagtgagt gaggatacac aagttgaaag agaacgagca
     1321 aaagaatttg cgagggcggc gaaagaaggg attggtgaaa atgggagttc aataaagaaa
     1381 ttaaataatc ttttcacatg aaaaaaagtt aacgaaagtc aataaagttg tcctcgtaag
     1441 accattttta acaacgccag acgttttgac atgttagtag gtgagaatgt ggtgcttgat
     1501 gggagtgctg gtaaaatgat gaataatggg tagtgtgctg agtggcgtgt tgttgggtag
     1561 gggtggagta tttttattat ttttctttca tttgttattg attttaattt attctgttta
     1621 attacttata tgattatttt gtaaattata aaaaacaaat aaatttaata aaaca
//
LOCUS       XM_071830408            1136 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840180), mRNA.
ACCESSION   XM_071830408
VERSION     XM_071830408.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1136
                     /gene="LOC139840180"
                     /note="uncharacterized LOC139840180; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139840180"
     CDS             236..934
                     /gene="LOC139840180"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686509.1"
                     /db_xref="GeneID:139840180"
                     /translation="MSAGFGEVPSPSTHGPFTANDNNSNNGDAGNFECNICFDLAQDP
                     IVTLCGHLFCWPCLYKWLHIHSQSQECPVCKALIEEEKLVPLYGRGKNSTDPRSKSVP
                     GVEIPHRPAGQRPETAPPPDRNAFGQPGFGFGPMGGFGPAMTASFGNFTFSFGGLIPS
                     FFNVQMNAFTGHPMYGNAAHPPNAVPGFNFGGHHHAHGLHQQRTHQHDTGFNAASPLL
                     IIGIIFIFALVCYG"
     misc_feature    296..>571
                     /gene="LOC139840180"
                     /note="E3 ubiquitin-protein ligase RMA2; Provisional;
                     Region: PLN03208"
                     /db_xref="CDD:178747"
     misc_feature    329..463
                     /gene="LOC139840180"
                     /note="RING finger, HC subclass, found in Arabidopsis
                     thaliana RING membrane-anchor proteins (AtRMAs) and
                     similar proteins; Region: RING-HC_AtRMA-like; cd16745"
                     /db_xref="CDD:438403"
     polyA_site      1136
                     /gene="LOC139840180"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggaagctcca agacaattct tcaaacaaaa tcattcaatt tcaataattc aataaataaa
       61 agattaccat ttaccagtca gaacaaattc attcacaatc atagccagtt acagccatcc
      121 tctgattcta cgcctcaatc agcacgtttt ttatttttcc gtacatcgcc ggtcgccgat
      181 tgctgtatca atttcgaaga tccgttcggg tgtttgataa tttgtgctga gagagatgtc
      241 agctgggttt ggggaagtgc caagcccgtc aacccatggc ccgtttactg caaacgataa
      301 caattccaac aacggtgatg ctggaaattt tgagtgcaat atatgctttg atttagcgca
      361 ggatccgatt gttacattgt gtggtcatct tttttgctgg ccttgtcttt acaaatggct
      421 tcacattcat tctcaatcac aagaatgccc tgtttgtaag gctttaatcg aagaggaaaa
      481 attagtgcct ttatatggaa gaggaaagaa ctcaactgat ccacggtcaa aatctgttcc
      541 tggtgtcgag attccacatc gacccgctgg tcagagacca gaaactgctc ctccaccaga
      601 tagaaatgcg tttggtcaac ctgggtttgg gtttggaccc atgggtggtt ttgggcctgc
      661 aatgactgca agttttggga acttcacttt ttcgtttggt ggtttgattc cgtcattctt
      721 taatgtgcaa atgaatgcgt ttacgggtca tcctatgtat ggaaacgcgg ctcatcctcc
      781 aaatgcagtg cctggattta actttggtgg acatcatcat gctcatggac tccatcaaca
      841 aagaactcac cagcatgata ctggttttaa tgcagcatca ccactcctaa ttattggaat
      901 catttttatc ttcgccctag tgtgttacgg gtaatttacc aatctgattg aaaacttgtt
      961 tgtatgatgt tatgtttgac ttttttgatc tgaataaaaa gtgtatgcta ggatcaatat
     1021 aatattttgt tcaaaataat aaaaactaca ttcaaatgag aaacctgctg gttttggtta
     1081 aagaaagtct ctcttaaaaa accgagaggt caacttcatc ttgttgccat cttcaa
//
LOCUS       XM_071830409             510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nascent
            polypeptide-associated complex subunit beta-like (LOC139840182),
            mRNA.
ACCESSION   XM_071830409
VERSION     XM_071830409.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..510
                     /gene="LOC139840182"
                     /note="nascent polypeptide-associated complex subunit
                     beta-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 41 Proteins"
                     /db_xref="GeneID:139840182"
     CDS             1..486
                     /gene="LOC139840182"
                     /codon_start=1
                     /product="nascent polypeptide-associated complex subunit
                     beta-like"
                     /protein_id="XP_071686510.1"
                     /db_xref="GeneID:139840182"
                     /translation="MNVEKLMKMAGAVRTGGKGTIRRKKKAVHKTTTTDDKRLQSTLK
                     RVGVNAIPAIEEVNIFKDESVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPSILN
                     QLGPDNLDNLRKLAEQFQKQAPGAGEGAATAQEEDDDDEVPELVAGETFEAVADEGKK
                     S"
     misc_feature    10..357
                     /gene="LOC139840182"
                     /note="basal transcription factor BTF3; Region: NAC_BTF3;
                     cd22055"
                     /db_xref="CDD:409234"
     misc_feature    64..78
                     /gene="LOC139840182"
                     /note="ribosome binding motif; other site"
                     /db_xref="CDD:409234"
     misc_feature    order(154..183,196..198,202..204,238..258,262..264,
                     304..312)
                     /gene="LOC139840182"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:409234"
ORIGIN      
        1 atgaatgttg aaaagttaat gaagatggcc ggtgctgttc gcacaggtgg aaagggaact
       61 attagacgaa agaagaaggc tgtgcataaa acaaccacca cagacgacaa gaggctgcaa
      121 agcactttga agagagtagg tgtaaatgca attcctgcaa ttgaggaagt taacattttt
      181 aaagatgaat ctgtcatcca gttcttaaac cctaaagttc aagcttctat tgctgccaac
      241 acttgggttg ttagtggtgc accccaaaca aagaaattac aagatattct ccccagtatt
      301 ctgaaccaat tgggaccgga taacttagat aatttgagaa agttagcaga gcagttccag
      361 aaacaggcac cgggtgcagg tgaaggggct gcaactgcac aagaggagga tgatgatgat
      421 gaagttccag aactcgttgc aggtgagact tttgaagctg ttgcagacga aggtaaaaaa
      481 tcttaagggt atttactagg cacggcgtgt
//
LOCUS       XM_071830410            1080 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At1g66480-like (LOC139840183), mRNA.
ACCESSION   XM_071830410
VERSION     XM_071830410.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1080
                     /gene="LOC139840183"
                     /note="uncharacterized protein At1g66480-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840183"
     CDS             109..789
                     /gene="LOC139840183"
                     /codon_start=1
                     /product="uncharacterized protein At1g66480-like"
                     /protein_id="XP_071686511.1"
                     /db_xref="GeneID:139840183"
                     /translation="MGNSLGSKNKTTKVMKINGETIKFKTPVNARDVLKDQPGLVLLD
                     SEAVKHFGIRSKPLEPQEDLKPKRLYFLVELPKLQEDNKHSTRRVRSGIINMSAKDRL
                     ENLKLARRSASDLSYMKPAASFMVENGGSGGGVDPLRVKLRLPKAEVERLMKESKDQT
                     EAAEKIMKLCMENSGAGGGDGGDVAAERRRVRWNDDGSRDGHKGRGKRVGFLPVSQEL
                     SVEEHTWM"
     misc_feature    109..513
                     /gene="LOC139840183"
                     /note="PADRE domain; Region: PADRE; pfam14009"
                     /db_xref="CDD:464065"
ORIGIN      
        1 tgtaatcttt tgtagggtta atcatatata aaagccataa tttatccgtt atatagcaca
       61 aaatctcatt tcctcaataa actaaaaaca accaaacatt tacaaaaaat gggaaatagt
      121 ttaggatcaa aaaacaagac aacaaaagtc atgaaaataa acggtgaaac aatcaagttt
      181 aaaacgcccg ttaacgcccg tgatgtgctc aaagaccaac cgggtctcgt gttactcgat
      241 tcggaggccg taaaacattt cggcattcga tctaaaccgt tggagccaca agaagatctt
      301 aaacctaaaa gactttactt tttagttgag ttaccaaaac ttcaagaaga taacaagcat
      361 tcaacaagaa gagttaggtc agggataata aatatgagtg ctaaagaccg gcttgagaac
      421 ttgaaattag ctcgaagatc ggcgtcggat ttatcgtata tgaaaccggc ggcgagtttt
      481 atggtggaga acggcggaag tggtggtggt gttgatcctt tgagggtgaa gttaaggtta
      541 cctaaagctg aagttgaaag gttgatgaag gaaagtaagg atcaaactga ggcggctgag
      601 aaaattatga aactttgcat ggagaatagt ggcgccggcg gaggagatgg cggtgatgtg
      661 gcggcggaga gacggcgtgt acggtggaat gatgatggta gtagagatgg tcataagggc
      721 cgtgggaaaa gagttggatt tctaccagtg agtcaggaac taagtgtgga agaacataca
      781 tggatgtgaa gaataatata taatcatcaa attacataca caagaccaca gtagccaagc
      841 agagtgattt tttgaatgaa tctttgtact tatgttaaaa tgttaaaaac acacactaaa
      901 gcatgttcaa atgagtgatt tatatatgat gcttatgctt ataaatataa ataactcatt
      961 ttaacatatt ttagtgttat attttagcta gtttagaatg aaaccacaag tgtgatgggg
     1021 ataaaaaaaa aacatgttca cattatctaa tgaacctctc tctggtgctg tggaataatt
//
LOCUS       XM_071830411            2878 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840184), mRNA.
ACCESSION   XM_071830411
VERSION     XM_071830411.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2878
                     /gene="LOC139840184"
                     /note="uncharacterized LOC139840184; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840184"
     CDS             1546..2610
                     /gene="LOC139840184"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686512.1"
                     /db_xref="GeneID:139840184"
                     /translation="MNSVTNLRDQKKLNVTDSAGPSNCNNGDFRNSHPYIQADYLDTF
                     PIGYRFKPTDEELVSHYLLPKIKNLVVPKSKIWDVNVYEKHPKDLAESYPEVKEGEWY
                     FFTSRNRRGLTGTRPCRKAGPGYWKASTPVKDIKSNNDGKRIGGKMLLVYLEGKSGYG
                     AKTDWHMHEYVIHGHTDMKFDDYVLCKITNKKYKKKRNVVNQQLNGSSNDPANGLVNQ
                     QAHAVPNQNMNGPTDFQIERNPNVQLSDLLSDTLRVGNNLLNRDFTQQLNQVRHNMII
                     QNLLRRLSQKIRYVPRTCYSNMGTPSVNHSIQSQLMNRQLLVNRYPHFPPPPNAQVQG
                     FPVGNSFDQFEADRHVERML"
     misc_feature    1678..2061
                     /gene="LOC139840184"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
ORIGIN      
        1 gggattactc cttcaagtaa tacgctttac ttttctcctt ttcatctatt ttgtcagacg
       61 ctttctcact tcatacttcg aatcgaaaag catacaatcc ctggtgcaac taaatggcta
      121 ccgatattca aaatccatca tttatcaagg tgttgagata tcctacatgt cttaatctga
      181 aacttcctcc gtcttggacc actctgcact acaatgattg taagccaaac cattttgttt
      241 tgcattcaga gtgtggatat agtcactatg ttaaaacaat tgaagaatca aacgatgact
      301 ttcgactttg cgatggttgg tcaaatgtag ttaactacca ctagtgtcga caaaaataca
      361 tttttgtttt tgaagtaatg gatatatcga tatcgactct cagaatgatt atatttgacg
      421 aatgtggaat tgaaaagtct tttccattag acagggttcc tatgttttgc attgttaatc
      481 tcgatccagt atctaaatat cagcaacttc ctaatgagtg gattacgaag aatacgaaac
      541 agtttatgat gcctatagaa gttgttataa gtacagttgg cggatacgaa acgttggttc
      601 atgtgtttat tgactctgat gacgacctaa taatggaagg atgggacaaa atcattaatg
      661 aactccaaat caaatttggt gatatactta ttttcaataa gcataatgag aaacacattc
      721 gcctacatgt gtattcacct gattcatgtg tcaaacgaac tcaagctttt aatggccaat
      781 atgcttaaaa taattaaagg cccagttttt ctattatttt tacttaataa tccattaaaa
      841 cataatcgga aatataagtt actaaacccg atcaccgaat atttttttca cttattgcaa
      901 cacctagcgt ctttttatca gttcgtgctt tagagaatga tgaaattgaa gttttgatat
      961 gaataaactt tttaacagaa atgttaacaa ttttattcat gagtttcatg tttacgaaaa
     1021 aacttcatga atcagaacaa catattacaa ttatcatata atagagacat ttaatataca
     1081 ctgtatatat actataaaaa gtgttcgaaa gagtacccgt gcaacgcacg ggctttataa
     1141 atctagtttg ctatatagct agtactcgta aaactaaacg tttatgcatg catgtaatta
     1201 aagaagagcg aggataaata taaatatata agtttgattt aatcaagagt ttcagttttc
     1261 gttcacttgg tgggaattta aggagggaaa atggactagt cagtttttgg gcttaaaaaa
     1321 tatatttatc tgtgctaaaa ttaaattaca agatgaacct gttattagat ttggacctga
     1381 atttagatgc tgcccccagc ccatgaggcc ctgcatgtaa taatggttat cagttcaaca
     1441 gagttagtta caaaatcagt tgcatattat ttaaacccag ttcaacaata gttatcatat
     1501 tctaactctt ctaccatcaa catcttaatt ctccttctga tcaacatgaa ttccgtcact
     1561 aatcttcgtg accaaaagaa actaaacgtc actgattctg ctggaccttc aaactgcaac
     1621 aatggtgatt ttcgaaatag tcatccatat atacaagctg attatcttga tacttttcca
     1681 attgggtatc gattcaaacc gaccgatgaa gaacttgttt cccattatct tcttccaaag
     1741 atcaaaaacc tggttgttcc caagagcaag atttgggatg ttaatgtcta tgaaaaacat
     1801 ccaaaagacc ttgctgagag ttacccggaa gttaaagaag gtgaatggta ttttttcaca
     1861 tcaagaaacc gaaggggttt aactggtacg agaccatgcc gaaaggcggg tcctggttat
     1921 tggaaagctt caactcctgt taaagatatc aaaagtaata atgatggtaa aagaattggt
     1981 gggaaaatgt tgttggtgta tcttgaaggc aaatcaggat atggggctaa aacagattgg
     2041 catatgcatg aatatgtaat ccatggtcat acagacatga agtttgatga ctacgtgtta
     2101 tgtaagatca ccaataagaa atataaaaag aagagaaatg ttgtgaatca gcagcttaat
     2161 gggtcatcta atgaccctgc aaacgggtta gtgaatcaac aggctcatgc tgtcccaaac
     2221 caaaatatga atggtcccac tgattttcag attgaaagaa acccgaatgt tcagctttca
     2281 gatctacttt cagatactct ccgtgttgga aataatttgc taaatcgcga tttcactcaa
     2341 cagctgaatc aagtcagaca caatatgatc atacaaaatt tgttacgccg tctgagtcag
     2401 aaaatcagat atgttcctag aacatgttat tcaaatatgg gtactccgtc agttaaccat
     2461 tctattcaaa gccaactcat gaacagacag ttattagtga atcgttatcc acattttcca
     2521 ccaccaccaa atgcacaagt acagggtttt ccagtaggca acagttttga tcagtttgaa
     2581 gccgacagac acgttgaacg aatgctctaa aacgatgcaa ataatggtgt ttttggtcag
     2641 ggtcataatg atatgtatga tgaacatggg ccactactga atatggatga attgaagaag
     2701 tttgaagcac caaacagtga tgactaaacg atatgaagat ccatgataca cagattgctc
     2761 atgttttagt ttctagctta gattcctagt tttagtagtt acattttagt atcctagagc
     2821 atttcttgtg acctgttttt ctgaagatat ttgttagtta aatttgcttt tgttctaa
//
LOCUS       XM_071830413            5599 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable methyltransferase
            PMT6 (LOC139840185), mRNA.
ACCESSION   XM_071830413
VERSION     XM_071830413.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5599
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5599
                     /gene="LOC139840185"
                     /note="probable methyltransferase PMT6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840185"
     CDS             3479..5392
                     /gene="LOC139840185"
                     /codon_start=1
                     /product="probable methyltransferase PMT6"
                     /protein_id="XP_071686514.1"
                     /db_xref="GeneID:139840185"
                     /translation="MKAHVNSDTKLCFPNILFLVPNTRTSLSRSHHHFHSIQHKMGKF
                     SWSTSAFNSKSGQTILLVLLVITASFYTGTFFGQNSNSLSISSSSSQSLGRPIFTNKV
                     TLTYRNSPLIIPESGLNICPIEYNEYIPCHDPKYIKEISPNLDHSRREDLERHCPPLE
                     KRLFCLIPPPQDYKIPIRWPTSRDYVWRSNVNHTHLAQVKGGQNWVHEKGQLWWFPGG
                     GTHFKHGASEYIQRLGNMITNETGDLRSVGVYQVLDVGCGVASFSAYLLPLKIQTMSF
                     APKDGHENQIQFALERGIGAMLSSLATKQLPYPSQSFEMVHCSRCRVDWHTNDGILLK
                     EINRLLRPNGYFVYSAPPAYRKDKDYPVIWDKLVNITSRMCWKLIAKKVQTAIWIKQT
                     DQVCLQQNAEQNLINICDPSHDNKISWKIPLKNCVTLGPEDLDHQKLPPIPQRFSMYS
                     ESLNRIGVTRDKFLSDTLYWQDQVREYWRFLNVDDNTVRNVMDMNAVYGGFAVSLSTW
                     PIWVMNVVPATMNNTLSAIYERGLIGAFHDWCEPFSSYPRTYDLLHANYLFSHYGDHQ
                     DGCLLEDILLEMDRLIRPQSYIIIRDNESIISRIREVAPKFIWDVNLHILENQQKQTE
                     QVLICQKKFWAIV"
     misc_feature    3857..5371
                     /gene="LOC139840185"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; Region: Methyltransf_29; pfam03141"
                     /db_xref="CDD:335237"
     polyA_site      5599
                     /gene="LOC139840185"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taatgtctgc tagcgactgc tcctcggtgt tgcttttaat gtcaaggtcg ttaacatacg
       61 cctcaaggtt gcgcccaatt tgtttagcga acgctatatc tatggtgcgc tgataggtag
      121 cacccgcgtt ttttagtccg aagggcattt tggtgtaaca gtatatcccc tggtctgtgt
      181 gaaacgcggt catctcttcg tcttcctcag ccatttgtat ttggtaatat cccttatagg
      241 tctaggaagc acttaaacct aaagcctgct agcgattcga ctttctagtc tatttttggc
      301 aacggataat tgtccctagg gcaggctttg ttgatgtctt tgaaatcaat gcaaagctgc
      361 cacgttccat cggacttggc taccaacacg gggttagcca cccatgtctg gtagttcact
      421 ttgcgcaaga tattagccct tactaacttg tcaacttctc tgcgcaacca cccgcttctt
      481 tcgggcgtca tcagtccctt ttttttgttt gataggtgtc aaattggtac tagcgcggag
      541 ataatgctgc gctatctcat gaggtactcc agtcatgtcg gcatcgcgcc aacagaacac
      601 gtcggagttg gaaatgagga tgttcctcag cttttcttta gtttcatgtg tcaggcttcc
      661 tcctatcttt accttctgtt ccggatactt ggaattgact atgaccaacc atttgttcgt
      721 gcctttctct tctggagtgg cactactttt atcggtaaca gacgcgcata aggcatccag
      781 cggtgttgat tcgagagtgg cgactcctct ttccgttgga aatcggacca tcccatggac
      841 cgtggatggt atagcgccga attttctaat ggaggttctt cccagtatag cattatacct
      901 agagtatgag cgcactacac aaaattcgat gctctcagtg cgccttttaa acttatcctt
      961 gctgtccctc agctccaacc tcaagtctag aatcccgatg ggccacgctg attctcctga
     1021 aaacccagat aaggccgtgg tcggaggtct gatggttcgc cttatcggcg tgggcaacta
     1081 tcgaaagcaa tgctcgtaca tgatgtcaac actactgcca ttgtccatat gaaggcgctt
     1141 aacaccatga tctgattcag gtaggtatct atgtactaca atgggcgtgc aggaagtgtt
     1201 gaacatctgg atagcaggga acgatatctc tgttgccccc gagcttccgc cagtgtcggc
     1261 tttgcgctta gttcctagct gctgtcggca gttgaccatt gaatgcattt atcttttcgt
     1321 aacggaagac tgtatagaaa aaataaatga gtagtggaca tatagagaaa tgatcaaatc
     1381 aaaacctttt aacttgtatg tcccacggat ggcgccaaat gatcaagcat agaataatcg
     1441 ggtcgggttc ggtccatgct tgacatcaat aaagagggat ttaagggtca attgagttta
     1501 actctccggt ccggagtacc gtgaataaac ccctgcaaga tgaggatctc agcggggtgg
     1561 gttaaacata gacccaccat cggcgggcgg tccgatcagc aatggctcgc gctgggtata
     1621 gggttttgtt catagaacgt tacctgtata tcgagagtgt ctagtgatat gttgtgagtc
     1681 cggtagcgcg ggtaaagaag gcgctatatg aatagcgcgg gtagtccgta cgtgggtgct
     1741 aaaaatagta tgtgtgtaac ttcccaaaaa acggatcctt tgccttgtga ttcgagtccg
     1801 ttatttatag ctacagtgct gtttgcttat tggagccacg tgttccacgt tgctttcttg
     1861 tctgtactat ctggtcggtc agtggagggg accagagaac aatactatta gtttttgcta
     1921 gctgtcggtc attgtacaga ggtcgtggta agtacaggac acgtcatctt cgtgtagcgc
     1981 gctatcccaa cctggcgcac gctagcgcac atttacttac gcctaaagtg ccagagcgcg
     2041 agggatgtgc acataaggtg caagtgtgat gcgcaacacg agccaatcgg gtatgcgtat
     2101 cattacctat taatggatat gatgagaaat gcttactctg atccaagagt catattaccg
     2161 aaagtgccaa tattccaagg tatacttctt tgattatatt ctttaacaaa taataccgtt
     2221 gtagtcggtc aaactcctcg aaccaatcaa atttcaccaa atatgcctga gttttttttt
     2281 tttcgaattg aaactgacgt cgttaagcct aatgcatggc taacagcgtc atcggacgtc
     2341 agttttgacc agttgagatg acgaatttcg tttgactctg ctgtaaaaga agcctaaggc
     2401 cacttgctat cgttcaactc tttcactaac attttccctg ccacatcagc gccacatcag
     2461 cacaaaccct ttaacatttc tttcacattc ctttcactaa atactcacta tcataaactt
     2521 taccacctca ctttactcat tttttattat tatttaaaac ttaaatataa ataacattta
     2581 taaacaaaat aaaatacaaa taaaattaat aaaaaagacg attacataaa ataataaaaa
     2641 tacgagtaca aaaaaaaagc acgaatacaa aaaaaaacac gaataaataa aaaaaaaaca
     2701 cgaatacata aaaaaacatg aatacataaa aaaaacacta ctacataaac aaaataccga
     2761 ttaatcggta taacaaccat ccgcactacc atcggtgtcg tgaggaagct cgtcccaaat
     2821 atgtttcgca tacaacaaga catttgtgga tttgattatt tcggttccga gtagccatgc
     2881 ccatttatcg ttatcctcga gccacttgaa gacgtgtttt tcgctattcc agtaagcgaa
     2941 atgcgaaatc tcaccgtaat gagggtcacg ccttaagtaa tcgaacaact cgccaactag
     3001 aaggccagta accggcacat ctacataatc gacaccccca ccgtcgtagc ggtccatgtc
     3061 atcggaaaac aacacgcctc cgtgaatctc gaacgtaaca gtgtttgtgg aaaccatttt
     3121 tttgtataaa aatttagagt gaattttgaa agagttaaaa tttgaaagtg atgtatgttt
     3181 ttgagtagtg gggtatttat atagaaattg ggttggaaaa acgaaaaaga aaaaaaatgg
     3241 aaaaaaaaat agcaacggcc gaatacaaat tcaaaaaatc gacgtgcgcc acactctaac
     3301 acccgttact cccgttgcag gagcaactgg cggcccttgt agcgatttgc tggcagcggt
     3361 ggtgaggggg tggcgaatgg tggcggaagg tgggtggcgt acatagcggg taacctaatg
     3421 ttattctagt tctagaaaat aaagaaactc atacaacttg ttcaaatcac gtgaccacat
     3481 gaaggcgcac gtgaatagtg acaccaagct ttgcttccca aatatcctgt tcctagttcc
     3541 taatactcgt actagtctct ctcgttcaca tcaccatttt cactctattc aacacaaaat
     3601 gggtaaattc agttggtcaa catcagcttt taattcaaaa tcaggccaaa caattctttt
     3661 ggttctttta gtaatcactg catcttttta caccggaacc ttttttggac aaaattccaa
     3721 ttctttgtca atatcatctt catcatcaca atcattaggt agacctatat ttactaacaa
     3781 agttactctt acgtaccgta actcaccact tataattcca gaatctgggt tgaatatatg
     3841 ccccattgaa tataacgagt acataccttg tcatgatcct aaatatataa aagaaatatc
     3901 cccaaattta gatcattcta gaagagaaga tctagaaagg cattgtccgc cactagaaaa
     3961 acggttattt tgcttgatac cgccaccaca agattacaag attccaatta gatggccaac
     4021 tagtcgagac tacgtatgga ggagtaatgt gaatcataca catcttgcac aagtcaaagg
     4081 tggtcaaaat tgggtgcacg aaaagggtca actttggtgg tttcctggtg gtggtacaca
     4141 ttttaaacat ggagctagtg aatatattca gagattagga aatatgatta ccaatgagac
     4201 tggtgatctt cgttcggttg gtgtatatca agttcttgat gttggttgtg gagttgcgag
     4261 cttttctgca tatcttcttc ctttaaagat acaaacgatg tcgtttgctc caaaagatgg
     4321 tcacgaaaat caaattcaat ttgctttaga acgtggaatc ggtgctatgt tatcttcttt
     4381 agctacaaaa cagcttcctt atcccagcca gtcttttgag atggttcatt gttcaagatg
     4441 ccgtgttgat tggcacacaa atgatgggat tctactaaag gaaatcaatc gtcttcttcg
     4501 gccaaacggg tattttgtat attccgctcc tccagcttac agaaaggaca aagattaccc
     4561 tgttatatgg gataagctag ttaatataac ttctagaatg tgctggaagc ttattgctaa
     4621 gaaagttcaa acagcaatat ggattaaaca aaccgatcaa gtttgccttc aacaaaacgc
     4681 agaacaaaat cttataaata tatgtgaccc atcacatgat aacaagatat catggaaaat
     4741 tccattaaaa aactgtgtta cacttggccc cgaggatctc gatcatcaaa aactccctcc
     4801 tataccacaa cgtttttcga tgtattccga aagtcttaac cgtataggtg tcacacgaga
     4861 caagtttctt tctgataccc tttattggca ggatcaagtg cgtgagtatt ggaggttttt
     4921 gaatgtggat gataacacgg ttagaaatgt tatggacatg aatgccgttt atggtggatt
     4981 tgcggtttct ttaagtactt ggcctatatg ggtaatgaat gtggtccccg caacaatgaa
     5041 caacacgttg tcggctattt atgaacgggg tttaattggt gcttttcatg actggtgtga
     5101 gccattctca tcttatccac gcacatatga tctgctccat gcgaattatc tattttctca
     5161 ctatggagac catcaagacg gttgcttatt ggaagatata ttgttagaga tggaccgtct
     5221 aatacggcct cagagctata ttattattag agataatgaa tccatcatat caagaataag
     5281 agaggttgca ccaaaattca tatgggatgt taatttacat atacttgaaa atcaacaaaa
     5341 gcaaacggaa caggtactaa tctgccaaaa aaagttctgg gctatcgtct gattatgatc
     5401 gattttcgaa cttaaaataa acttgttaaa tgaatgtaga atgtagctga tgtttgtata
     5461 ctgtagattt gcagtatttt gtttgttgta attatttaag gaacaagccc atgttttaga
     5521 ttttttgtta gaagattatt agagctatgg tcttgtaaaa cttttcaata tcctattggt
     5581 ttattttttc tcactctta
//
LOCUS       XM_071830414            1139 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides S-adenosylmethionine carrier
            1, chloroplastic/mitochondrial-like (LOC139840186), mRNA.
ACCESSION   XM_071830414
VERSION     XM_071830414.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1139
                     /gene="LOC139840186"
                     /note="S-adenosylmethionine carrier 1,
                     chloroplastic/mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139840186"
     CDS             1..981
                     /gene="LOC139840186"
                     /codon_start=1
                     /product="S-adenosylmethionine carrier 1,
                     chloroplastic/mitochondrial-like"
                     /protein_id="XP_071686515.1"
                     /db_xref="GeneID:139840186"
                     /translation="MGPLTLSFHSQNSLLSSSDVSSDTLQLLPKKSFASVSIGDEKPF
                     DFIRTVFEGFIAGGTAGVVVETALYPIDTIKTRLQAARGGGKIVLQGLYSGLAGNLVG
                     VLPASALFVGVYEPAKQKLLKIIPYNLSAVAHLTAGAIGGIAASLVRVPTEVVKQRMQ
                     TRQFASAPDALRLIVAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAARR
                     DLNDPENAAIGAFAGALTGAITTPLDVIKTRLMIQGSANQYKGIVDCVQTILREEGPP
                     ALLKGIGPRVLWIGIGGSIFFGVLERTKKVLAERNLQPSNHQSSESRKQH"
     misc_feature    151..900
                     /gene="LOC139840186"
                     /note="mitochondrial carrier protein; Provisional; Region:
                     PTZ00168"
                     /db_xref="CDD:185494"
ORIGIN      
        1 atgggtcctc ttacattgtc ttttcactcc cagaattcat tactgtcttc ctcagatgta
       61 tcaagtgaca cgttgcagtt gttaccgaaa aagtcttttg catcagttag cataggggat
      121 gaaaagccat ttgatttcat aagaaccgta tttgagggtt ttatagcagg aggtacagct
      181 ggagttgttg tcgaaaccgc tttataccca attgatacta taaaaacaag actccaagca
      241 gctcgtggtg gaggaaagat tgttcttcag gggctatatt caggattggc tggaaatctt
      301 gttggtgttt taccggcttc tgccttgttt gtaggtgtat atgaacctgc aaaacagaaa
      361 ctattgaaga taattcccta caatcttagt gctgtcgcac atctgactgc aggtgcaatt
      421 ggaggaattg ctgcatctct tgtacgcgtt ccaacagagg ttgtaaagca aaggatgcag
      481 actcgtcaat ttgcttcagc tcctgatgcg ctccggctta ttgttgccaa agaaggtttt
      541 aaaggtctat atgcgggata tggatctttt cttctgcgtg atttaccttt tgatgctatc
      601 cagttctgta tatatgagca acttcgaatt ggctataagt tggctgcacg tagagacctc
      661 aatgatcctg aaaatgcagc tattggtgct tttgctggcg cacttaccgg agctataacg
      721 actccgcttg atgtaataaa aactaggttg atgatacaag ggtcagcaaa ccagtacaaa
      781 ggaatagttg actgtgtgca gacaatattg agggaagaag gaccccctgc ccttttaaag
      841 ggtatagggc cacgagtgct ttggatagga attggaggtt cgatattttt tggcgttttg
      901 gagagaacaa agaaagtact tgcggaacgg aatctgcagc catctaatca tcagagttca
      961 gaatcccgaa agcaacatta aagtagatgg tatttatatg aatcaaccca ttgttgcaag
     1021 agatttatgg attagttttg gaacaggcta gtcaaatgca caatttgtac tttttatcat
     1081 tgtttgtaat gctgttacta ggtcttgtgt gtatgagaat aaactgatgg aagatttat
//
LOCUS       XM_071830415            1344 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840187), transcript variant X1, mRNA.
ACCESSION   XM_071830415
VERSION     XM_071830415.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1344
                     /gene="LOC139840187"
                     /note="uncharacterized LOC139840187; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139840187"
     CDS             79..894
                     /gene="LOC139840187"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686516.1"
                     /db_xref="GeneID:139840187"
                     /translation="MSMSKTSKMLQFINYRMRITIQDGRQLVGKFMAFDRHMNLVIGD
                     CEEFRKLPPAKGSKKGEEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAA
                     LSGPGLGRAAGRGIPTAPLAQAQPGLSGPVRGVGGPAPGMMQPQISRPPMNYPPQAPV
                     IRPGQMPYPGQGPPSQMSRGPPPGMPPPQFAQRPPGPGQYPPPGQYGQRPGMVPPPMM
                     RGPPPMGGAPRPGMPGPPPPGRPGMPPPGGQMPGFGPPRPGMPPPPNNQQQQQ"
     misc_feature    91..333
                     /gene="LOC139840187"
                     /note="Sm protein B; Region: Sm_B; cd01717"
                     /db_xref="CDD:212464"
     misc_feature    order(100..102,118..120,142..147,172..174,184..186,
                     205..210,289..330)
                     /gene="LOC139840187"
                     /note="heptamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:212464"
     misc_feature    order(127..147,151..189,193..207)
                     /gene="LOC139840187"
                     /note="Sm1 motif; other site"
                     /db_xref="CDD:212464"
     misc_feature    order(136..153,157..159,175..180,187..189,193..195,
                     199..201,262..264,277..279,283..285,289..321)
                     /gene="LOC139840187"
                     /note="putative hexamer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:212464"
     misc_feature    order(184..195,223..225,259..267,301..303,307..309)
                     /gene="LOC139840187"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:212464"
     misc_feature    289..324
                     /gene="LOC139840187"
                     /note="Sm2 motif; other site"
                     /db_xref="CDD:212464"
ORIGIN      
        1 cggagtaaca cattcctcat tgcctgcttc cctccgctac aaaaacccta attctctgaa
       61 accctaacat caacaaaaat gtcgatgtca aagacttcaa aaatgctcca attcatcaac
      121 taccgtatgc gtatcaccat ccaagatggc cgtcaattag tcggaaaatt catggctttc
      181 gatcgccaca tgaatctcgt aatcggcgac tgtgaagagt tccgtaaact tccacctgca
      241 aaaggatcca aaaaaggcga agaacgtgaa gaccgtcgca ctctcggtct cgtccttcta
      301 cgcggcgaag aagttatttc catgacagtc gagggaccac cgccgcctga tgaaaaccgt
      361 gcaaaagccg tcggagctgc tgctttatct ggtccaggtc tcggccgtgc tgctggccgt
      421 ggaataccta ctgctccttt agctcaagct caaccgggtt tatctggacc cgttagaggt
      481 gttggtggac cggctcctgg tatgatgcaa ccgcagattt caagaccacc aatgaattat
      541 cctcctcaag ctccggtgat caggcccgga caaatgccgt atcctggaca aggtcctcca
      601 tcgcagatgt cacgaggacc gcctccaggt atgccgccac ctcagtttgc gcaacggccc
      661 cctggtcctg gtcaatatcc tccacctgga cagtatggac agagacctgg aatggttcca
      721 ccgccgatga tgaggggacc accacctatg ggcggagctc cacgacctgg tatgcctggt
      781 ccaccgccac ctggacgacc tggaatgcct ccacctggtg gacagatgcc aggttttggt
      841 cctccgcgcc ctgggatgcc tcctccacca aacaaccagc aacagcagca gtagcagact
      901 agcagtgact gggaatgagt agttttctgt ttgggcaatc ctgtgaagat gacttttgaa
      961 gaggtttcgt gcttataggc ttctgtggca acagcaagat cttggggtga atttgctagt
     1021 ggtttgtatc agtaaagagt ttacattcat tgctagactt gaattatgtt ggatttagca
     1081 catattatga ccatttaata tcagtttgaa tgctatttta aacctgagcc caactgctgg
     1141 atcatttgca gcttaaatgg tagttggtat aactggcaga gtcatgttga ttgtacgcac
     1201 acaattgcaa ccttttggtt tcatctcaat tggtctaagc caaagtaaat ggaaactggt
     1261 actgaagttt ctatacaaaa gtgggctaat ttatgcctcg aaccataaat aattgcatat
     1321 atgttgttca aatgctgaaa aagc
//
LOCUS       XM_071830416            1345 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840187), transcript variant X2, mRNA.
ACCESSION   XM_071830416
VERSION     XM_071830416.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1345
                     /gene="LOC139840187"
                     /note="uncharacterized LOC139840187; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139840187"
     CDS             79..894
                     /gene="LOC139840187"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686517.1"
                     /db_xref="GeneID:139840187"
                     /translation="MSMSKTSKMLQFINYRMRITIQDGRQLVGKFMAFDRHMNLVIGD
                     CEEFRKLPPAKGSKKGEEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAA
                     LSGPGLGRAAGRGIPTAPLAQAQPGLSGPVRGVGGPAPGMMQPQISRPPMNYPPQAPV
                     IRPGQMPYPGQGPPSQMSRGPPPGMPPPQFAQRPPGPGQYPPPGQYGQRPGMVPPPMM
                     RGPPPMGGAPRPGMPGPPPPGRPGMPPPGGQMPGFGPPRPGMPPPPNNQQQQQ"
     misc_feature    91..333
                     /gene="LOC139840187"
                     /note="Sm protein B; Region: Sm_B; cd01717"
                     /db_xref="CDD:212464"
     misc_feature    order(100..102,118..120,142..147,172..174,184..186,
                     205..210,289..330)
                     /gene="LOC139840187"
                     /note="heptamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:212464"
     misc_feature    order(127..147,151..189,193..207)
                     /gene="LOC139840187"
                     /note="Sm1 motif; other site"
                     /db_xref="CDD:212464"
     misc_feature    order(136..153,157..159,175..180,187..189,193..195,
                     199..201,262..264,277..279,283..285,289..321)
                     /gene="LOC139840187"
                     /note="putative hexamer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:212464"
     misc_feature    order(184..195,223..225,259..267,301..303,307..309)
                     /gene="LOC139840187"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:212464"
     misc_feature    289..324
                     /gene="LOC139840187"
                     /note="Sm2 motif; other site"
                     /db_xref="CDD:212464"
ORIGIN      
        1 cggagtaaca cattcctcat tgcctgcttc cctccgctac aaaaacccta attctctgaa
       61 accctaacat caacaaaaat gtcgatgtca aagacttcaa aaatgctcca attcatcaac
      121 taccgtatgc gtatcaccat ccaagatggc cgtcaattag tcggaaaatt catggctttc
      181 gatcgccaca tgaatctcgt aatcggcgac tgtgaagagt tccgtaaact tccacctgca
      241 aaaggatcca aaaaaggcga agaacgtgaa gaccgtcgca ctctcggtct cgtccttcta
      301 cgcggcgaag aagttatttc catgacagtc gagggaccac cgccgcctga tgaaaaccgt
      361 gcaaaagccg tcggagctgc tgctttatct ggtccaggtc tcggccgtgc tgctggccgt
      421 ggaataccta ctgctccttt agctcaagct caaccgggtt tatctggacc cgttagaggt
      481 gttggtggac cggctcctgg tatgatgcaa ccgcagattt caagaccacc aatgaattat
      541 cctcctcaag ctccggtgat caggcccgga caaatgccgt atcctggaca aggtcctcca
      601 tcgcagatgt cacgaggacc gcctccaggt atgccgccac ctcagtttgc gcaacggccc
      661 cctggtcctg gtcaatatcc tccacctgga cagtatggac agagacctgg aatggttcca
      721 ccgccgatga tgaggggacc accacctatg ggcggagctc cacgacctgg tatgcctggt
      781 ccaccgccac ctggacgacc tggaatgcct ccacctggtg gacagatgcc aggttttggt
      841 cctccgcgcc ctgggatgcc tcctccacca aacaaccagc aacagcagca gtagcagact
      901 agcagtgact gggaatgttt tctgtttggg caatcctgtg aagatgactt ttgaagaggt
      961 ttcgtgctta taggcttctg tggcaacagc aagatcttgg ggtgaatttg ctagtggttt
     1021 gtatcagtaa agagtttaca ttcattgcta gacttgaatt atgttggatt tagcacatat
     1081 tatgaccatt taatatcagt ttgaatgcta ttttaaacct gagcccaact gctggatcat
     1141 ttgcagctta aatggtagtt ggtataactg gcagagtcat gttgattgta cgcacacaat
     1201 tgcaaccttt tggtttcatc tcaattggtc taagccaaag taaatggaaa ctggtactga
     1261 agtttctata caaaagtggg ctaatttatg cctcgaacca taaataattg catatatgtt
     1321 gttcaaatgc tgaaaaagca cattt
//
LOCUS       XM_071830417            2021 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lycopene beta cyclase,
            chloroplastic/chromoplastic (LOC139840188), mRNA.
ACCESSION   XM_071830417
VERSION     XM_071830417.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2021
                     /gene="LOC139840188"
                     /note="lycopene beta cyclase, chloroplastic/chromoplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 24 Proteins"
                     /db_xref="GeneID:139840188"
     CDS             270..1784
                     /gene="LOC139840188"
                     /codon_start=1
                     /product="lycopene beta cyclase,
                     chloroplastic/chromoplastic"
                     /protein_id="XP_071686518.1"
                     /db_xref="GeneID:139840188"
                     /translation="MDTLLRTHNSFEFLRPINKFSGNVNTLSSFKSQFHDLRFGPKLP
                     HFKWAHKSCVKASSSALLELVPEIKKENLDFELPMYDPSRGLVVDLVVVGGGPSGLAV
                     AQQVSEAGLTVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWASAVVYIDENST
                     KSLNRPYARVNRKQLKTKMLQKCISNGVKFHQAKVIKVIHEEFKSLLICNDGVTIQAT
                     LVLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLKNNLE
                     IKERNSKIPTFLYAMPFSSTRIFLEETSLVARPGLKMEDIQERMVCRLKHLGIKVKSI
                     EEDERCVIPMGGPLPVLPQRVLGIGGTAGMVHPSTGYMVARTLAAAPIVAKSIIQYLN
                     SEKKVSGIDLSAEIWKDLWPIERRRQREFFCFGMDILLKLDLEGTRRFFDAFFDLEPR
                     YWHGFLSSRLFLPELLTFGLSLFAHASNTSRLEIMAKGTLPLATMINNLVQDRE"
     misc_feature    447..1781
                     /gene="LOC139840188"
                     /note="lycopene beta cyclase; Region: PLN02463"
                     /db_xref="CDD:178082"
ORIGIN      
        1 ctctcaaaaa gattatagat ggattctttc accacctctg gtaatctttc aatctttctt
       61 cctttcaatt ttctgaattt tagctaatat aattttcagt tcactgcaaa cccacttaaa
      121 acacatcaat ttctacccac atattaggtt cttcaaatca attactagtt aaagttctca
      181 agtttattgc tcaatttggg ggtttctttg ctgtttgatg tttactgaat aaagtttgga
      241 tttttagctg aaattacatc tggatcttca tggatacttt gttaagaaca cataattcgt
      301 ttgagttttt gcgcccaatc aataaatttt caggtaatgt taacactttg agttcattta
      361 agtctcaatt tcatgacctt aggtttggcc ctaaattacc ccatttcaaa tgggctcata
      421 aaagttgtgt taaggctagt agtagtgctc ttttagagct agttcctgaa atcaagaaag
      481 agaatcttga ttttgagctt cctatgtatg atccttcaag gggtcttgtg gttgacctag
      541 ttgtggttgg tggcggccca tctgggttag ccgttgctca acaagtatct gaggctgggc
      601 taaccgtgtg ctcgattgac ccttcaccta aattgatttg gcctaacaat tatggtgttt
      661 gggtggatga atttgaggct atggatttgt tagattgtct tgatactaca tgggctagtg
      721 cggttgttta catcgatgag aactctacta agagtcttaa tagaccttat gctagggtta
      781 ataggaaaca acttaagaca aagatgttac aaaagtgtat atcaaacggg gttaagtttc
      841 atcaagcaaa agtgattaaa gtcattcacg aagaattcaa gtcattatta atttgtaatg
      901 acggtgtgac aattcaagcg actttggttc ttgatgcaac gggtttttca agatctcttg
      961 tgcaatatga taagccttat aatcctggtt accaagtggc gtatggtatt ttagccgaag
     1021 tggaagaaca cccttttgat gtcgacaaga tgttgtttat ggattggaga gattcgcatc
     1081 ttaaaaacaa tcttgaaatt aaagaaagaa attcaaagat tccaactttt ctttacgcga
     1141 tgccattttc gtccactaga atatttcttg aagaaacttc acttgtggct cgtccagggt
     1201 taaaaatgga agatattcaa gaaagaatgg tgtgtcgatt aaagcattta ggtataaaag
     1261 tgaaaagcat tgaagaagac gagcgttgtg tcatcccaat gggtgggccc ctacccgtat
     1321 tacctcaaag agttcttgga ataggtggga ccgcaggaat ggttcatcct tcaaccggat
     1381 atatggtggc aagaacttta gctgctgccc caattgtcgc aaaatcgata attcagtatc
     1441 ttaattctga aaaaaaggtc tcgggaatcg atttatcagc agaaatttgg aaggatttgt
     1501 ggcctataga gaggagacga caacgtgaat tcttttgttt cggtatggat atcttgctta
     1561 agctcgattt ggaagggaca cgaaggtttt ttgatgcgtt ttttgattta gaacctcgtt
     1621 attggcatgg gtttttgtca tcgagattgt ttctacctga gttattgaca ttcgggcttt
     1681 ctcttttcgc tcatgcttct aatactagta ggctagagat tatggcaaaa ggaactttac
     1741 cgttggcaac tatgatcaac aatttagttc aagatcgaga gtagatatca agatttatac
     1801 ttatatactt gtaagctttt gttcttacca tttgtatact ttatatatga caattaatgt
     1861 atctttcagt tgattagcgt gtatctgtat ctctgtttgt catggaaatc aattttttca
     1921 tacctgttta tgcaagttta tatcactact actctacttt aatagaaggt gccttaagtt
     1981 aggtttttgc agtgtagttg taataaacag agcaagactg c
//
LOCUS       XR_011757270            2833 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840189), ncRNA.
ACCESSION   XR_011757270
VERSION     XR_011757270.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2833
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2833
                     /gene="LOC139840189"
                     /note="uncharacterized LOC139840189; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840189"
     ncRNA           1..2833
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840189"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840189"
ORIGIN      
        1 aagctagcca aaaagcaggc caggcaggcg agacgcatgt caaaatgaac tgaaatctct
       61 aaccacggag atcaacctac gcctttggct acacggagta gggtagaatt cctcagtgtt
      121 gttatttggg aagtccgtga gctccatggg ttccggccaa catttagaaa cggccacgag
      181 aacggcggct agaggaaaag aacggccaga gaacatcacg tcacttgccg gaaaagaaaa
      241 ggaagaagaa aggtcagagc taccggcgaa atgccggtgg ctggaaaagc aaaatgtaag
      301 aagctaccaa ccgagaacca aatgaaggag caggcggcgg cgatttaggg ttacagggtg
      361 gtaaggtgaa aaagataagg ttggagggtg acatttgtga tacatttgct ttgcaaaaga
      421 aagttcctta cttcactcaa aatgctttat taattattaa ttaattaatt attattatta
      481 attaatcctt cctacatact aaacctcctc cgggtttctg ccgttttatt caaccccact
      541 cacatccaat ctccaaaacg acatctgcca aattacataa agaaaaaaaa aacacacacc
      601 gtatttcttc tctccctctc ctctcttctc tcctacatcg ctctgtacaa attagggttt
      661 ccacctctga ttaatcgcgt ttttcatcgc ctgtagcagg ccgctccacc acctccatca
      721 ccgtcacgaa cccccaatga ccggaatcaa atgtcgcaca tcctccaccg caacgaaacc
      781 actcgccgct attaatcctt cctatatact aaacctcccc cgggtttctg ccgttttatt
      841 caaccccact cacatccaat ctccaaaacg acatctgcca aattacataa agaaaaaaaa
      901 aaaatacaca ccttatttct tctctccctc tcctctcttc tctcctacat cgtacaaatt
      961 agggtttcca cctctgatta atcgcgtttt ccatcgcctg tagcaggccg ctccaccacc
     1021 tccatcaccg tcacgaaccc ccactgaccg gaatcagatg tcgcacatcc tccaccgcaa
     1081 cgaaaccact cgccgctacg ggtggaagca caaattaaag aagagacacg attcagttgt
     1141 tgacggaagc ataaattgat gaatttgaga ttgctactga cgtcgctaat atctggttat
     1201 tagagcagga gttccacaag tacacgcata agacaactta ggcagattgg ttaaagataa
     1261 ctatctataa atgggtaaat ggtggtattc atcagaatac attttgactg ggttgggtgt
     1321 aacattagtt gtatataaag atggtttata catcataatt agagatacac tttttgataa
     1381 gtgttaatat cttagaaatt ttgagtttcg gttttttcaa ttgaggtatt tttttgtatg
     1441 ggatatgatt gattaattat tggtaactga atagtaatat gattaatggg atgtagtgat
     1501 aataaaggtg aaggctgaga aaatggacat ggagatattg gagaaaaaga aatgatcaga
     1561 ttaaaatcgg ttttggtgcg ggtgataatg aaccaattgg atacatgtct agggttaaaa
     1621 gtatacagaa ccctataaat taaggtcgaa aacgatggag atgggacttt agatcatgtg
     1681 gtcgcgttta agaataaatt ttttaaaatg agtataggtg gaggtggtaa tgaatttaat
     1741 taaacagatt ggaagttgta gtaagcataa aaatccaaag ggcatggcaa ctttcttgat
     1801 cagggagtat taggtttctt gatttgcatg tatgacatgg tgtacttaga aaccttggtt
     1861 atatgatgat ttaatgatta ttagctgtga tgcaatttat gttatgaaaa aatgtggcta
     1921 ttgatgggtg agatggtact tgcaggtgga gataatgaca aaccatggtt tcctgccaag
     1981 cataagatta ggtgaaggcc gtgcttttgg tgtcattcga gaagtgtttt tgaactcgga
     2041 aagctatttc catctattcc attagttggt gaggaggatt atgcattctt atgttcaaat
     2101 aatttggtag actctgttct ataggttacc gataaatcaa gctcccgaga taacgtatta
     2161 acacaagctg atgtacttca agctattaat agagtaggag catttggacc caacccagcc
     2221 acatattggg tatgtttttt ttgttttttt ttggtgcata atttgaccag tatgtaacta
     2281 ttcgtagaag gtattgatac ataaaaaaaa tctcacgact gccacaaaat gtacacgtta
     2341 aacatatgtg tcttcaatat tgccgattgt tggggattgt aaagttgtgc ttgatggttt
     2401 agcataatac cactaaaccg tcaacaaaga aaagaaccgg gtatcgtatt tatcttttgt
     2461 ttttcacact aaattaccct ttcagtagta tactttaact aatacggatt attgtttttt
     2521 aatggcgagt taaggagatt ggggcgttta atttattgtt attgtcgttt tatagattta
     2581 tgctaagact atattataga gttaaaattg ttacgtttgg ttatatataa gttgcatcaa
     2641 cagctaaagc aagttgcacc agcaattttg tttgatctta aaacgcagct gaaaaaataa
     2701 tccagaatgc tttgtaggac gatagcggga cccctaacac catcagttcc agcaagcaca
     2761 ctacaaccgt taaaaatatc tcgaatagaa aacaccgggt aaagcgccgc aacgcgcgca
     2821 ccggaccttt tct
//
LOCUS       XM_071830418             936 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA-directed RNA polymerases
            IV and V subunit 5B-like (LOC139840190), mRNA.
ACCESSION   XM_071830418
VERSION     XM_071830418.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..936
                     /gene="LOC139840190"
                     /note="DNA-directed RNA polymerases IV and V subunit
                     5B-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139840190"
     CDS             102..806
                     /gene="LOC139840190"
                     /codon_start=1
                     /product="DNA-directed RNA polymerases IV and V subunit
                     5B-like"
                     /protein_id="XP_071686519.1"
                     /db_xref="GeneID:139840190"
                     /translation="MDENGVEDLMDTEMSNGVGSTVNKCLSTFVDDGSIESHRYYLSR
                     RTLLEMLKDRGYDISDSEINFTLKQFRELHGQDVDVDRLRISASHVSDSENKILAVFC
                     GPGPVKVNVIRWITTQIMNKDSLSRLIIVVQSHITNQAMKSVELFSFKVEIFQITDLL
                     VNITKHVLKPKHRVITDQEKEKLLKKFNLNEKQLPRMSEKDAIAQYYGLTKGQVVEVT
                     YNGEITGLHVTYRCIW"
     misc_feature    189..803
                     /gene="LOC139840190"
                     /note="DNA-directed RNA polymerase II subunit family
                     protein; Provisional; Region: PLN03111"
                     /db_xref="CDD:215582"
     polyA_site      936
                     /gene="LOC139840190"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcaccacctc tcttcgaact cccaacactg acaaaaatac ctacacaaac tctgaaccac
       61 aaacccactt agatccacat cattaaaaca cacatacaaa aatggatgaa aatggggtag
      121 aagatctaat ggatacagag atgagtaacg gtgttgggtc aacggtcaac aaatgtttaa
      181 gcacttttgt tgatgatggt agcattgaga gtcacagata ctatctttca cgcagaacac
      241 ttttagagat gcttaaagat agaggttatg atatctctga ttctgaaatc aacttcactc
      301 ttaaacagtt tcgtgaactc catggtcaag atgttgacgt ggaccgtctt cgtatcagtg
      361 catctcatgt ttctgattct gaaaataaga ttctagctgt cttctgtggg cccggtccag
      421 taaaagtgaa tgtgatccgc tggattacaa cgcagataat gaacaaagat agtttaagcc
      481 gtctgataat agtagtgcaa agtcacatta caaatcaggc tatgaaatct gtggagcttt
      541 tctcattcaa agttgaaata tttcaaataa ccgatttact tgttaacata acgaagcatg
      601 tgttgaaacc gaagcatagg gtaataacag atcaagagaa agaaaaactt ttgaagaagt
      661 tcaatttgaa tgagaaacag cttccaagaa tgtcagaaaa ggatgccatc gcgcaatatt
      721 acgggctgac gaagggccag gtggttgaag tcacttacaa tggtgaaata actggattgc
      781 acgttaccta ccgttgtatt tggtgaattt gttgcattcg gtatgttatt aactaggaac
      841 tttgtgtgtt tgtaagctag tgatctacac ttgtactgaa tttctagtag tctgtttgtt
      901 gaataatgtg cgagtttaag tcgtttaaag tcttca
//
LOCUS       XM_071830419            1560 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450
            CYP72A219-like (LOC139840191), mRNA.
ACCESSION   XM_071830419
VERSION     XM_071830419.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1560
                     /gene="LOC139840191"
                     /note="cytochrome P450 CYP72A219-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 37 Proteins"
                     /db_xref="GeneID:139840191"
     CDS             1..1560
                     /gene="LOC139840191"
                     /codon_start=1
                     /product="cytochrome P450 CYP72A219-like"
                     /protein_id="XP_071686520.1"
                     /db_xref="GeneID:139840191"
                     /translation="MEVSKMCYYVGVVIIVILLVSCAWSLLNLVWLKPKKMEKFLREQ
                     GLKGNPYKFLFGDLKEMVQSMVKAKSRAIGINDDIVPRVLPFTLKSVTTHGKTCFAWM
                     GYKPVLQVSEPLLIREIFTNYRQFQKLRGVNPLTKLLVKGLINTDADQWIKHRIIINP
                     AFYVEKLKNMVPAFYVSCYEMVNNWDEMLTNETSCEVDVWPHLQTFTSDVISRTAFGS
                     SFEEGRKIFQLQRELVELIIAAERSIYIPGSRFLPTRSNMRIKKINREVMDSIRSIIN
                     KRMMMMEVGEVNNDDLLGILLDSNFREIKENENNRLRLSTEEVIEECKVFYFAGQETT
                     ANLLVWTMILLGQYTNWQTRARNEVLDVLRDKKPEIDGLAHLKIVNMILNEVLRLYPP
                     VVALGRMIHEETKLGSITLPAGTHLQLNTLLLHHDSDLWGYDAKEFKPERFSEGVSKA
                     TKGQASFYPFGGGPRICIGQNFAMIEAKMALVMILQRFSFELSPSYSHAPHTIITLQP
                     QFGAHLILHKI"
     misc_feature    250..1545
                     /gene="LOC139840191"
                     /note="cytochrome P450 family 72; Region: CYP72; cd20642"
                     /db_xref="CDD:410735"
     misc_feature    order(451..453,463..465,484..486,631..633,973..978,
                     985..990,997..1002,1009..1011,1159..1161,1186..1188,
                     1192..1194,1261..1263,1375..1383,1393..1407,1414..1419)
                     /gene="LOC139840191"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410735"
     misc_feature    order(697..702,973..975,982..987,997..999,1180..1191)
                     /gene="LOC139840191"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410735"
ORIGIN      
        1 atggaggtta gtaaaatgtg ttattatgtt ggggtagtaa taatagtaat attgttagtt
       61 tcatgtgcat ggagtctttt gaatttggtg tggctcaaac caaagaaaat ggagaagttt
      121 cttagagaac aaggtctaaa gggcaatcca tataaatttt tatttggaga tttgaaagag
      181 atggtgcagt caatggttaa agctaaatca agagcgatcg gtataaatga tgatatagtt
      241 cctcgtgtgt taccatttac ccttaagtca gtcactactc atggtaaaac ttgttttgca
      301 tggatgggat acaaaccggt gctgcaagtc tccgaaccat tgttgatacg cgagatattt
      361 acaaattatc gtcagtttca aaaactaagg ggagtgaatc cattaacaaa attgttagtg
      421 aaagggctaa ttaacactga tgctgatcaa tggattaaac atagaataat cattaatcct
      481 gcattttatg tggaaaagct caagaatatg gtacccgctt tttatgtaag ctgttatgaa
      541 atggtcaaca attgggatga aatgttaact aacgaaactt catgtgaagt ggacgtgtgg
      601 cctcatcttc aaacatttac tagtgatgta atttcacgca cagcgtttgg aagtagcttt
      661 gaagaaggaa gaaagatatt tcaacttcaa cgagaactag tagagcttat tatagcggct
      721 gaacgatcaa tttacattcc agggtcaaga tttttgccaa cacggtcaaa catgaggatt
      781 aaaaagatta atagagaagt tatggattca ataagaagta ttatcaacaa gagaatgatg
      841 atgatggaag ttggggaagt taataacgac gatcttttag gcattctttt ggattccaat
      901 ttcagagaaa ttaaagaaaa cgagaataat agattaagat tgagcacaga agaagtcatt
      961 gaagagtgca aagttttcta cttcgcaggg caagagacca cggcaaattt gctcgtttgg
     1021 actatgattt tattaggtca atacacaaat tggcaaacac gagctagaaa tgaagtgtta
     1081 gatgtcttaa gagataaaaa accggagatt gatggattag ctcatctaaa aatcgtaaac
     1141 atgatactta atgaggttct tagactatat ccaccggtgg tagcattagg aaggatgata
     1201 catgaagaaa caaaattagg gagcataacg ttaccggctg gaacacatct acaactaaac
     1261 acgttgcttt tgcaccatga tagcgattta tggggctacg atgcaaaaga atttaaaccc
     1321 gagagatttt ctgaaggtgt ttctaaggca accaagggac aagcgtcgtt ctaccctttt
     1381 ggaggtggcc cacgtatatg cattggacaa aactttgcta tgatcgaagc aaaaatggcc
     1441 cttgttatga ttctacaacg cttctccttt gagttgtctc catcgtactc acatgctccg
     1501 cacaccatta tcactctgca gcctcaattc ggtgctcact taatcctaca taaaatttaa
//
LOCUS       XM_071830420            1849 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides anthranilate synthase alpha
            subunit 1, chloroplastic-like (LOC139840192), mRNA.
ACCESSION   XM_071830420
VERSION     XM_071830420.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1849
                     /gene="LOC139840192"
                     /note="anthranilate synthase alpha subunit 1,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139840192"
     CDS             1..1749
                     /gene="LOC139840192"
                     /codon_start=1
                     /product="anthranilate synthase alpha subunit 1,
                     chloroplastic-like"
                     /protein_id="XP_071686521.1"
                     /db_xref="GeneID:139840192"
                     /translation="MQSLSSSLRSSPSFNRRSPPLHLQHSAISGRINTSISFRNRSSI
                     RCVLQSPPLVGEEAEFVEASKKGNLVPLHRCIFADHLTPVLAYRCLVKEDDQEAPSFL
                     FESVEPGFRTSQVGRYSVVGSDPTIEVIAKEKNVTIVDHEKGSLTQKVVDDPLEIPKS
                     LSDGWKPQLLEGLPDTFCGGWVGYFSYDTVRYVEKKKLLFIDAPKDDRNLADIHLGLY
                     EDVIVFDHVQKKAYIIHWVRLDEYSSTEEAYNDGIKRLDTLLSKVHNVDSPKLLPGSV
                     ELSTQQFGTPLNNSNMTSEEYKAMVLQAKEHILAGDIFQIVLSQRFERRTFADPFEIY
                     RALRVVNPSPYMTYLQARGCILVGSSPEILTRVKSNTVFNRPLAGTIRRGKTREEDEQ
                     LEEILLNDEKQCAEHIMLVDLGRNDVGKVSKSGSVNVEKLMTIERYSHVMHISSTVTG
                     ELLDHLTCWDALRAALPVGTVSGAPKVKAMELIDKMEVTRRGPYSGGFGWISFTSEMD
                     IALSLRTMVFPTGARFDTMYLYKDDNKRKQWVGYLQAGAGIVADSVPDDEQQECENKV
                     AGLARAIDLAESAFCK"
     misc_feature    178..1746
                     /gene="LOC139840192"
                     /note="anthranilate synthase component I; Region:
                     PLN02445"
                     /db_xref="CDD:215244"
ORIGIN      
        1 atgcagtccc tatctagttc tctccgatca tcaccgtcgt ttaaccgccg ttctccgccg
       61 ttgcacctcc aacactccgc aatttccggt cgaatcaata cttcaatttc gtttcgcaac
      121 cggagttcta ttcgctgtgt tcttcagtct ccacctctag ttggtgaaga agccgagttt
      181 gttgaggcat caaagaaagg gaatctggta cctcttcacc gatgcatatt tgctgatcac
      241 ttgacaccgg tgctcgctta tcgctgtcta gttaaagaag acgatcaaga agctcctagt
      301 tttctattcg agtcagtgga gcctggtttt cgaacttcac aagttggtcg atacagcgtg
      361 gttgggtcag atccaacaat tgaagttatt gcgaaagaaa agaatgtcac cattgtggat
      421 catgagaaag ggagtttgac tcaaaaagtc gttgatgatc ctttagaaat tccaaaaagt
      481 ctctctgatg gttggaaacc tcagcttctt gaaggccttc ctgatacatt ttgtggtggc
      541 tgggttggtt acttttcata tgacacagtt cgctacgtag agaagaagaa gctcttgttc
      601 atagatgcac caaaagatga cagaaaccta gctgatattc atcttggatt gtatgaagat
      661 gtaattgtgt ttgatcacgt gcaaaagaaa gcatatataa ttcactgggt gagacttgat
      721 gagtattcat caactgaaga agcttataat gatggaatca aacgcttgga tacattgctg
      781 tctaaagtac ataatgttga ttccccaaag ttacttccgg gttcagtgga attaagcacc
      841 caacaattcg ggactcctct caacaactct aacatgacca gtgaagaata caaggcaatg
      901 gtactgcagg caaaagaaca cattctcgcg ggtgatattt ttcagatcgt tttaagtcaa
      961 cggtttgaac gccgtacatt tgcagatcca tttgagatct acagagcatt aagagttgtg
     1021 aatccaagtc cttacatgac ttatttgcag gctcgagggt gtatcttagt tggttcaagc
     1081 ccagaaattc ttactcgtgt gaaatctaat acggttttca atcgacctct agctggtact
     1141 ataagaagag gaaaaactcg tgaagaggac gaacagttag aggaaatact actaaatgac
     1201 gaaaagcaat gtgcagaaca catcatgttg gttgacttgg gaaggaatga cgtgggaaag
     1261 gtctcaaaat ctggttcggt taatgttgaa aagcttatga ccattgaacg atactcccat
     1321 gtgatgcata tcagttccac agtgactggg gagttgctcg atcatctcac ttgctgggat
     1381 gcccttcgtg ctgcacttcc tgttggaaca gttagcggtg ctccaaaggt gaaggccatg
     1441 gaactaattg ataaaatgga agtcacaaga cgtgggccct acagtggagg gtttgggtgg
     1501 atttctttta ccagtgagat ggacatcgcc ctgtccctta ggaccatggt gttcccaact
     1561 ggagcccgtt ttgacacaat gtacttatac aaggatgaca ataagcgaaa gcaatgggtg
     1621 ggttaccttc aagcaggtgc tggtattgtc gccgatagtg ttccagacga tgagcaacag
     1681 gagtgtgaaa acaaagtagc tggactggct cgtgctattg atctggccga gtctgctttt
     1741 tgcaaatgac tcttaacatc agttattgtt aggatataat atgttaaaag acagtaggtc
     1801 agaatcaggt gggattagtt ttaatggctt ttgagaactt gttatggca
//
LOCUS       XM_071830421            1294 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            BIM2-like (LOC139840193), mRNA.
ACCESSION   XM_071830421
VERSION     XM_071830421.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1294
                     /gene="LOC139840193"
                     /note="transcription factor BIM2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840193"
     CDS             51..947
                     /gene="LOC139840193"
                     /codon_start=1
                     /product="transcription factor BIM2-like"
                     /protein_id="XP_071686522.1"
                     /db_xref="GeneID:139840193"
                     /translation="MKNNNDKIDATRSKHSVTEQRRRSKINERFQILRDLIPNSDQKK
                     DTASFLLEVIEYVQYLQERVHKYEGSYQGWSAEPTKLMPWRNSHWRVPNFGQSPVIKN
                     DSGPSPSFPGRFDEIVSIPQTVTAAAQHPALSDPIGDVNCNTINSQPELASKMPMPIQ
                     PSIPVPIQQVDGTFSHPTVQGSVGNVNLQSTDVPAADDGSSKEELTVEGGTISISSVY
                     SQGLLNSLTQALQNSGVDLTQATISVQVDLGKRANRGLTTSGTTSVKDHENPHSSNQQ
                     VDRFQDMSNGENSDQASKRLKT"
     misc_feature    84..305
                     /gene="LOC139840193"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BES1-interacting Myc-like proteins
                     (BIMs) and similar proteins; Region: bHLH_AtBIM_like;
                     cd11453"
                     /db_xref="CDD:381459"
     misc_feature    order(93..98,105..110,114..119,129..131,183..188)
                     /gene="LOC139840193"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:381459"
     misc_feature    order(123..128,135..137,144..149,156..158,186..191,
                     198..203,210..212,219..221,228..233,240..242,249..254,
                     258..263,270..272,279..284,291..293,300..305)
                     /gene="LOC139840193"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:381459"
     polyA_site      1294
                     /gene="LOC139840193"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actttttatc aattgaacaa cgattacgga aaaagaaaaa tgcatcaaat atgaagaaca
       61 ataatgataa gattgatgca actaggtcta aacattcagt cacagaacag cgtagaagga
      121 gcaagattaa tgaaagattt cagatattga gggatttgat accaaacagt gatcaaaaga
      181 aagatacagc atcatttcta ctggaggtga tagaatatgt tcaatactta caggaaaggg
      241 ttcacaagta tgagggatca taccaaggtt ggagcgcaga gcctacaaaa ttaatgcctt
      301 ggagaaacag tcattggcgg gtcccgaatt ttgggcaatc tcctgttata aagaatgatt
      361 ccggaccatc cccatctttt cctggtagat ttgatgaaat tgtctcaatt ccacagaccg
      421 tcaccgcagc cgcacaacat cccgctcttt ctgacccaat tggagatgtg aactgtaata
      481 cgatcaattc tcaacctgaa ttagcaagta aaatgccgat gcccattcaa ccgagcattc
      541 ctgtccctat tcagcaagtt gatggtacat tttctcatcc taccgttcag gggtcagttg
      601 gtaatgtaaa tttgcagtcg accgatgtcc ccgctgccga tgatggaagt tcgaaagagg
      661 agctaactgt tgaaggtggc actatcagca tttcaagtgt ttattcccag gggttattga
      721 attctcttac acaagcacta cagaactcgg gtgttgattt gactcaagcc acgatctccg
      781 ttcaagttga tcttgggaaa cgagcaaata gaggactgac gacttctggc acaaccagtg
      841 tgaaggatca tgagaatccc cattccagta atcagcaagt tgatcggttt caagacatga
      901 gcaatggtga aaactcagat caagcttcga aaagactgaa aacatgacaa cgtttgtctc
      961 ttaagtgtgg tgtgtgtggg tgggggttgg ggggtctata cccgaaacac cagtaaaagt
     1021 tgtatatgct gtgtctgttt cattgtttgc aacccgagaa atgtgtgtac tattctatag
     1081 agagttgtat tgcagtttct acttggtagt ggtagaggac ggttcacctt tgactttgtt
     1141 tactattttt tttctatttt tgaataatca aaatatgtta ctgttgttac tattttaagc
     1201 ttaggggatt caagtttgtt agtactattg tggatggaaa atgatgtaga attaaatttt
     1261 ttgtttttat attgtaagtt ctattattat cgta
//
LOCUS       XR_011757271             224 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840194), ncRNA.
ACCESSION   XR_011757271
VERSION     XR_011757271.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..224
                     /gene="LOC139840194"
                     /note="uncharacterized LOC139840194; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840194"
     ncRNA           1..224
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840194"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840194"
ORIGIN      
        1 agcatctttg atctctgtac acctctctac cctgcatatt tcctgccact agcatcttta
       61 ggaaatcttg ctaaggctgt ggcaagaggg ctaaaggatc cttcatttcg ggtgatccaa
      121 aatcattttg ctgtttcagg aaatcttgga gatgtggcag caaaggtggt cacgagatgt
      181 agaatgagaa acccatggtc agaatagtaa tagtgatttt ggat
//
LOCUS       XM_071830422            1068 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ACD11 homolog protein-like
            (LOC139840195), mRNA.
ACCESSION   XM_071830422
VERSION     XM_071830422.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1068
                     /gene="LOC139840195"
                     /note="ACD11 homolog protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840195"
     CDS             140..832
                     /gene="LOC139840195"
                     /codon_start=1
                     /product="ACD11 homolog protein-like"
                     /protein_id="XP_071686523.1"
                     /db_xref="GeneID:139840195"
                     /translation="MDIFSYFTSEKLSFDDENEFEDAEEGTALSMIADAFEELSNLIK
                     NVNKNDVSFDLRLKPFCDACALVSVLFGSLGIAFKFAEMEYTSKVRDLSEAASLYGTL
                     SKVIDCDVKTDTVQAAESLTRKIRRVRQGLDLIRELFQNFISTDGDYSLKEAASTAYK
                     QVCAPYHTWAVRSAVSAGMYALPTRDQLLLNLNESDESAENEMKRYIKASLPVIKYID
                     NLYTSRGITLDW"
     misc_feature    302..706
                     /gene="LOC139840195"
                     /note="Glycolipid transfer protein (GLTP); Region: GLTP;
                     pfam08718"
                     /db_xref="CDD:462575"
ORIGIN      
        1 cttggccggc gccaaaagta gttacctccc accttcatat atctccttcc cattttcctt
       61 aataccatca tattcataca tattaagttt caaattttat tttttctcta acaaccttct
      121 tttttttttc aatcaaaaaa tggatatttt ttcatacttc acctcagaaa agttgagttt
      181 tgatgatgag aatgaatttg aagacgctga agaaggaact gctttatcta tgattgcgga
      241 cgcgtttgaa gaattatcga atttgattaa aaacgtaaac aaaaatgatg tttcgttcga
      301 tttgcgattg aagccttttt gcgatgcgtg tgctttggtg tctgtgttat ttggttcact
      361 tggtattgct tttaaatttg ctgaaatgga atacacatct aaggtgcgcg atctttcaga
      421 ggcggcgagc ctttatggaa cgttaagtaa agtaattgat tgtgatgtga aaaccgacac
      481 ggtgcaagca gctgagagcc ttactcgtaa aattcgcaga gttagacagg gactcgatct
      541 cataagagaa ctatttcaga attttatatc aacagatggg gattactcgt tgaaagaagc
      601 agcttcaacg gcgtacaaac aagtttgtgc accatatcat acatgggctg ttagaagtgc
      661 ggtttctgct ggaatgtatg cccttccaac aagagatcaa ctcttgctca acctaaatga
      721 atctgatgaa tcagcggaga atgaaatgaa aaggtatata aaggcgtcac ttccggttat
      781 aaagtacata gataacttgt acacttcaag ggggatcaca ttggattggt gatgtttttg
      841 tataaaattg tgagttgtat cgacttattc atatttgttc cacgaaagac atttacatta
      901 ttttataact ccaggtgtgt tttgtaacaa ctcttgtata ttggcaatac tttggaacac
      961 ttgggtcaat tctattatat ctagctagtt gtgatattac catttggcac tcttggttag
     1021 attcatgtac atgtcgtatt tggttacttg ttttttttta tttctttc
//
LOCUS       XM_071830423             959 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tetrapyrrole-binding
            protein, chloroplastic (LOC139840196), mRNA.
ACCESSION   XM_071830423
VERSION     XM_071830423.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..959
                     /gene="LOC139840196"
                     /note="tetrapyrrole-binding protein, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139840196"
     CDS             77..799
                     /gene="LOC139840196"
                     /codon_start=1
                     /product="tetrapyrrole-binding protein, chloroplastic"
                     /protein_id="XP_071686524.1"
                     /db_xref="GeneID:139840196"
                     /translation="MATTSLQSLNYRHQTPPLNRRQRCSLDSLPPPSLSFSIKSNTFK
                     TYSLATSSSTSSTSSTTFDVLTHHLTTNNFREADNETRRLLIQLAGDSAVKRGYVFFS
                     EVQFISESDLKAIDTLWRNNSNNKFGYSVQKRLFDKSDNDFTKFFIRVGWMKKLDTEV
                     VQYNYRAFPEEFIWELNDETPEGHLPLTNALRGTQLLSCIFSHPAFAEEEQNVVEEEQ
                     EEKSKQNVVKGGGGVFKPNYSF"
     misc_feature    260..688
                     /gene="LOC139840196"
                     /note="GUN4-like; Region: GUN4; pfam05419"
                     /db_xref="CDD:428461"
     misc_feature    order(320..322,530..532,572..574,581..583,590..592,
                     635..652)
                     /gene="LOC139840196"
                     /note="ligand binding site [chemical binding]; other site"
                     /db_xref="CDD:319862"
     polyA_site      959
                     /gene="LOC139840196"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catcactgac acactcaaac acactctcca tttattaaaa aaaaaattat aaataaaaaa
       61 aaaaaaaaaa aaacaaatgg ccaccacttc tctccaatcg ttaaactacc gccaccagac
      121 accaccgcta aaccgtcgtc aacgatgctc actagactcc cttccaccac catcactctc
      181 attttcaatt aaatcaaaca cattcaaaac ctactcactc gccacgtcat catccacctc
      241 ctccacgtca tcaacaacct tcgacgtcct cactcaccac ctcaccacca acaacttccg
      301 agaagccgat aacgaaactc gccgtctact aatccaactc gccggagact ccgccgtgaa
      361 acgaggatac gtattcttct cagaagtaca attcatctca gaatcagatc ttaaagcaat
      421 cgatacgtta tggagaaaca acagtaataa caaattcggt tactccgttc aaaaacggtt
      481 atttgataaa tcagataatg attttacgaa attttttatt agagttggat ggatgaagaa
      541 acttgatacg gaagttgtac agtacaacta cagagcgttt cctgaggaat ttatttggga
      601 gttaaatgat gaaacgccag aaggtcatct gccgttaacc aatgcgttac gtgggaccca
      661 gttgctgagc tgtattttta gtcatccggc ttttgctgaa gaagaacaaa atgttgttga
      721 agaagaacag gaggaaaaaa gtaagcagaa tgttgtgaaa ggaggaggag gagtttttaa
      781 gcctaattat agtttttgat tattattcaa ttaattaaac tataataatt ttgttattta
      841 tatttgtaat atgtgattgt aatagtgtgt tgaattggat actgatttgt ttgtaatatt
      901 attggattgt ttgtccaatt gtttttgtat actaacagaa ataaagaatt ttaagggtt
//
LOCUS       XM_071830424             864 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphomethylpyrimidine
            synthase, chloroplastic-like (LOC139840197), transcript variant X1,
            mRNA.
ACCESSION   XM_071830424
VERSION     XM_071830424.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..864
                     /gene="LOC139840197"
                     /note="phosphomethylpyrimidine synthase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840197"
     CDS             8..685
                     /gene="LOC139840197"
                     /codon_start=1
                     /product="phosphomethylpyrimidine synthase,
                     chloroplastic-like"
                     /protein_id="XP_071686525.1"
                     /db_xref="GeneID:139840197"
                     /translation="MNEGPGHLPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYD
                     HITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPH
                     AQEWDDALSKARFEFRWLDQFALSLDPMTATSFHDETLPSDGAKVAHFCSMCGPKFCS
                     MKITEDVRKYAEEHGYGSAEEAVQQGMDAMSAEFQAAKKTVSGEQHGESGGEIYLPES
                     YISAKKI"
     misc_feature    <8..676
                     /gene="LOC139840197"
                     /note="HMP-P synthase; Region: PLN02444"
                     /db_xref="CDD:215243"
     polyA_site      864
                     /gene="LOC139840197"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtaggtcatg aacgaaggac caggacatct cccgatgcac aaaatacccg aaaacatgca
       61 aaaacagctc gaatggtgca acgaagcacc attctacaca ctcggaccat taaccaccga
      121 tatcgcacca ggatacgatc acatcacttc agctatcggt gcagccaata tcggtgccct
      181 aggaaccgcc cttctctgtt acgtaacacc aaaagaacac ctcggcttac caaaccgtga
      241 cgacgttaaa accggcgtca tatcatacaa aatagccgca cacgcagccg atttagcaaa
      301 aggtcatcca catgcacaag aatgggatga tgcacttagt aaagcgcggt ttgagtttag
      361 gtggttggac cagtttgctt tgtcgttgga cccaatgact gctacttcgt ttcatgatga
      421 gacgttaccg tctgatggtg cgaaagtggc ccatttttgt tcgatgtgtg ggcccaagtt
      481 ttgttcgatg aagataactg aagatgtgag gaagtatgct gaggaacatg ggtatggtag
      541 tgctgaagag gcggttcaac aagggatgga tgctatgagt gccgagtttc aggcggctaa
      601 gaagacggtt agcggtgaac aacatggtga gtccggtggc gagatttact tgccggaatc
      661 ttacatcagc gctaagaaga tataaaggaa gcaagtgatc ataaagaatc gtcgtggagt
      721 gtctgcatga tcggcctagc ataaaacgag atccaactac tcggttttaa gctgtaggta
      781 agtacatagt ttcagtttgt gatgaataaa aggccgaaca aatgtttcct ttgatttgca
      841 attgtgtttt cagttcaact ctta
//
LOCUS       XR_011757272            1580 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphomethylpyrimidine
            synthase, chloroplastic-like (LOC139840197), transcript variant X2,
            misc_RNA.
ACCESSION   XR_011757272
VERSION     XR_011757272.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1580
                     /gene="LOC139840197"
                     /note="phosphomethylpyrimidine synthase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840197"
     misc_RNA        1..1580
                     /gene="LOC139840197"
                     /product="phosphomethylpyrimidine synthase,
                     chloroplastic-like, transcript variant X2"
                     /db_xref="GeneID:139840197"
ORIGIN      
        1 gtaggtcatg aacgaaggac caggacatct cccgatgcac aaaatacccg aaaacatgca
       61 aaaacagctc gaatggtgca acgaagcacc attctacaca ctcggaccat taaccaccga
      121 tatcgcacca ggatacgatc acatcacttc agctatcggt gcagccaata tcggtgccct
      181 aggaaccgcc cttctctgtt acgtaacacc aaaagaacac ctcggcttac caaaccgtga
      241 cgacgttaaa accggcgtca tatcatacaa aatagccgca cacgcagccg atttagcaaa
      301 aggtcatcca catgcacaag aatgggatga tgcacttagt aaagcgcggt ttgagtttag
      361 gtggttggac cagtttgctt tgtcgttgga cccaatgact gctacttcgt ttcatgatga
      421 gacgttaccg tctgatggtg cgaaagtggc ccatttttgt tcgatgtgtg ggcccaagtt
      481 ttgttcgatg aagataactg aagatgtgag gaagtatgct gaggaacatg ggtatggtag
      541 tgctgaagag gcggttcaac aagggatgga tgctatgagt gccgagtttc aggcggctaa
      601 gaagacggtt agcggtgaac aacatggtga gtccggtggc gagatttact tgccggaatc
      661 ttacatcagc gctaagaaga tataaaggaa gcaagtgatc ataaagaatc gtcgtggagt
      721 gtctgcatga tcggcctagc ataaaacgag atccaactac tcggttttaa gctgtagcat
      781 tttcaggctg agaaagtccc ttagaacctg aacaggataa tgcctgcgta gggagagtgc
      841 gttttctttt cttttatgta gttatacgag agggagatta cgttttcggg ctcgttatga
      901 tgatcatgca tgcgcccata tctcatgtgg ctggcctagt aactgatttc aaactagaag
      961 tcagtttact tgatgaggtt ggtcattctt acgaagagga atctaaagtg attttaagtt
     1021 tcagaggtag caatatgggc gtgttgggaa tatgtcaaca ttaaaatata gaattctttt
     1081 agtttaagtg attcaggtgg ttataatgat atgcgctatg aagtatcatg gacaactttc
     1141 aacccccttg acctattttt tcgttttagg cctaattttg ttatttgacc catttgactc
     1201 gttatagata aaatgtatcc caagtcaacc cattcacaag tctagtgttg aaatcttttt
     1261 acattggttc tgaaatgcaa atcatttgag gatccaaatt ggatctgtac tttgatataa
     1321 ggtcttggat actaaaaatg gtacagtact atgtaaagat gacaacttgg ccgggttggg
     1381 gaacttgtca aaactgggag tttttgtgca ggtagaaaat ggtaatgttg ggttttctga
     1441 aatttttttg ttcgaaaaac ttatatatgt ccagtagaag cggatagtgt tgggtcgtgg
     1501 gcagtggcga ttctagaatt acaacttaat agggtcccga tttttttttc cagcagtaat
     1561 gatatttgaa tgttatttta
//
LOCUS       XM_071830425            1667 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840198), mRNA.
ACCESSION   XM_071830425
VERSION     XM_071830425.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1667
                     /gene="LOC139840198"
                     /note="uncharacterized LOC139840198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840198"
     CDS             83..1492
                     /gene="LOC139840198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686526.1"
                     /db_xref="GeneID:139840198"
                     /translation="MVEVKVLSGESKDLTRIERIGAHSHIRGLGLDSSLEPRAISEGM
                     VGQTTARKAAGVIVQMVKDGKIAGRAVLLAGQPGTGKTAIAMGMAKSIGLETPFAMLA
                     GSELFSLEMSKTEALMQSFRKAIGVRIKEETEVIEGEVVEIQIDRPAATAAAAAALKT
                     GKLTLKTTEMETVYDLGAKMIEALGKDKVQSGDVIAIDKASGKITKLGRSFSRSRDYD
                     AMGPTTKFVQCPDGELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRAEVRE
                     QIDTKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVVATNRGI
                     TTIRGTNYKSPHGIPIDFLDRLLIISTQPYTEDDISKILDIRCQEEDVDVSEDAKLLL
                     TKIGVDTSLRYAINLITSAALACQKRKGKVVEMEDVSRVYELFWDVKRSTQYLIDYQS
                     QYMFNEATTGEEDEVNMMV"
     misc_feature    137..1183
                     /gene="LOC139840198"
                     /note="TIP49 P-loop domain; Region: TIP49; pfam06068"
                     /db_xref="CDD:399217"
     misc_feature    1196..1393
                     /gene="LOC139840198"
                     /note="TIP49 AAA-lid domain; Region: TIP49_C; pfam17856"
                     /db_xref="CDD:436097"
ORIGIN      
        1 ccttgttgaa tatacaaaca actctaccaa aaccctaaac ccaaatttat tgtggtcgtc
       61 gtcacaaact tagtaaggaa ggatggtgga ggtaaaagtg ttgtcaggcg aaagcaaaga
      121 cctaacacga attgagcgta ttggcgctca ttcacacatt cgaggcctag ggcttgactc
      181 atcccttgaa ccacgcgcta tctctgaagg catggttggt caaacgaccg ctcgcaaagc
      241 cgccggagtg atcgtccaga tggttaaaga tggaaagatt gccggtcgag cagttctact
      301 ggccggtcag cccggaacag ggaaaacggc gattgcaatg ggaatggcaa aatcaattgg
      361 attggaaacc cctttcgcaa tgcttgcagg tagcgaactc ttttctctcg agatgtctaa
      421 aactgaagct cttatgcagt cttttaggaa ggccattggt gtgaggatta aagaggaaac
      481 tgaagtcatt gaaggtgaag tggttgaaat ccaaatcgac cgtcctgctg ctacagccgc
      541 tgctgctgct gcattaaaaa caggaaagtt gactctcaag acaactgaaa tggagactgt
      601 gtacgattta ggagcaaaga tgattgaggc gttagggaag gataaagtcc agagtggtga
      661 tgtcattgct attgataagg cttctggaaa aataacaaaa cttgggagat ctttttccag
      721 gtctagagat tatgatgcca tgggacccac tactaagttt gtccagtgtc ccgatggaga
      781 attgcagaag aggaaggaag tcgtgcattg tgttactctt catgaaatcg atgttatcaa
      841 tagcagaaca cagggatttc ttgctctttt cacaggtgac accggagaaa tacgagcaga
      901 ggtgagggag cagattgata caaaggtagc agagtggcga gaggaaggaa aggctgagat
      961 tgtccctggt gttcttttta tagacgaagt ccacatgctt gacattgagt gtttttcatt
     1021 cttaaatcgt gcattagaaa atgacatggc accaatacta gttgttgcca ccaaccgagg
     1081 aatcacaact attcgaggca caaactacaa atccccacac gggattccaa tcgatttctt
     1141 ggatcgcctc ctcatcatct ctacacaacc ttacacagaa gacgacatta gcaagattct
     1201 tgatataagg tgtcaagagg aagatgtgga tgtatctgaa gatgcaaagc tcttgttgac
     1261 caaaattggg gttgacacat ctttgagata cgccataaac ctgataacct cagctgcttt
     1321 ggcttgccaa aagaggaaag ggaaggttgt ggagatggaa gacgttagtc gagtttatga
     1381 gctgttttgg gatgtgaaga gatcgacaca gtacttgatc gactatcaga gccaatacat
     1441 gttcaatgaa gcaacgacag gcgaggaaga tgaagtcaac atgatggttt gataaggtgc
     1501 tagtaattgt tgttctagtt tatttatgtc tattatatta catgacattg ttgatctgaa
     1561 gaataccaag tctttaatca taggtaaagt ctcgtggaca ggtacttttt cctttaccta
     1621 gagattcttg tctattatgt ttgaaaatgt ttgcattgaa gcttatt
//
LOCUS       XM_071830426            1959 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides patellin-3-like
            (LOC139840199), mRNA.
ACCESSION   XM_071830426
VERSION     XM_071830426.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1959
                     /gene="LOC139840199"
                     /note="patellin-3-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 29 Proteins"
                     /db_xref="GeneID:139840199"
     CDS             109..1800
                     /gene="LOC139840199"
                     /codon_start=1
                     /product="patellin-3-like"
                     /protein_id="XP_071686527.1"
                     /db_xref="GeneID:139840199"
                     /translation="MAEETLKTTAEAPATTTEVVAVVPETVPEKVEVTAVVEKEGPPE
                     SDVAEEKEKISESASFKEESNVAGELPDPQKKALDELKALVQEALNKHEFTAPPPPAK
                     EEKPAEEVAPVKVEEAKTTDETPAETALVTTESSEPVECKKEETVAEVKEEVPEVKEP
                     VPEVKEPVPEVKEEVSEVKEPVKEETEPVKEVTEPEVVEKKIETVEETIVATVTEETP
                     AAPEEVSIWGIPLLADERSDVVLLKFLRARDFKVKEAFTMLKNVVAWRKEFGIESLLD
                     EDLGSEQEKVVYMHGTDKEGHPVCYNAYGEYGNKELYNETFATEEKRTKFLRWRIQFL
                     EKSIRKLDFSPDGINTIVQVIDFKNSPGPFQWELRQTTNQALQLFQDNYPEFIAKQVF
                     INVPFLYVAFYKIISPFFTQRTKSKFVFAGPSKTAETLFKYIAPELVPVQYGGLSREG
                     EQEFTSSDSVTEEIIKPATKHCIEFPATETCTLVWEAKVDYGVTYAAEFVPAVEGGYT
                     VIVQKSRKIVASTDEPVICGSFKCGEPGKVVLTFDNQTSKKKKLLYRSKTKVTTD"
     misc_feature    <436..783
                     /gene="LOC139840199"
                     /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
                     /db_xref="CDD:236766"
     misc_feature    <796..891
                     /gene="LOC139840199"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    934..1446
                     /gene="LOC139840199"
                     /note="Sec14p-like lipid-binding domain; Region: SEC14;
                     cd00170"
                     /db_xref="CDD:469559"
     polyA_site      1959
                     /gene="LOC139840199"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcccaactca taccattact ctcaaaatca tcaaactaaa caaactttac aaacccaagt
       61 tatcttcaaa ctatttgatc gaataattaa ttgtctattt taatattaat ggctgaagag
      121 acgttgaaaa ctacggcgga agctccggca accacgacgg aagttgttgc cgtggttccc
      181 gagacggtac cggagaaagt tgaagtgact gccgttgttg aaaaagaggg acctccggaa
      241 tccgacgtgg cggaggagaa agagaagata tctgaatcgg cgtcgtttaa agaagaatct
      301 aacgttgccg gtgaattacc agatcctcag aaaaaagctt tggatgaact taaagcttta
      361 gttcaggaag cacttaataa gcatgagttc accgctcctc cgccgccggc aaaggaggag
      421 aaaccggctg aagaggtagc tccggttaag gttgaagaag ctaaaaccac tgatgaaact
      481 ccggcagaga cagcgttggt gacgacggag tcgtctgaac ctgttgagtg caaaaaagaa
      541 gagacagtcg cggaggtgaa agaagaggta ccggaagtga aggaaccggt accggaagtg
      601 aaggaaccgg taccggaggt gaaagaagag gtttcggaag tgaaggaacc ggtaaaagag
      661 gagactgaac cggtgaaaga ggtgacagaa ccggaggtgg tagagaaaaa aattgaaacg
      721 gttgaggaaa caatcgtggc aacggtgacg gaggaaacgc cggcggcacc agaagaggta
      781 tcaatttggg gaattccgtt actggctgac gaacgaagtg acgtcgtttt gctaaaattt
      841 ctccgagcac gtgacttcaa agtgaaagaa gcttttacta tgctgaaaaa cgtcgtcgca
      901 tggcgcaaag agttcggaat tgaatcatta ctagatgaag atttaggatc tgaacaggaa
      961 aaagttgtgt atatgcacgg aactgataag gaagggcatc cagtttgtta caacgcttat
     1021 ggtgaatatg gaaacaaaga attatacaat gaaacgtttg caactgagga gaaaagaacc
     1081 aagtttcttc gatggaggat tcagtttctt gaaaaaagta tcaggaaact tgattttagt
     1141 cctgatggta ttaatacaat tgtacaagtt attgatttca agaattcgcc tgggccgttt
     1201 cagtgggagt tgaggcagac aactaatcaa gctttacagt tgtttcagga taattatcct
     1261 gaatttattg ctaaacaggt gtttatcaac gtgccgtttc tgtacgttgc tttttataag
     1321 attattagtc cctttttcac tcaaaggact aagagcaagt ttgtgtttgc tggaccttca
     1381 aagactgctg aaaccctttt caagtacata gcacccgaat tggttcctgt tcaatatggt
     1441 gggcttagcc gtgaaggaga gcaagaattc acatcgagtg actcagttac tgaagagatc
     1501 attaagcctg caaccaaaca ctgcatcgag ttccctgcta ctgagacttg cacattggta
     1561 tgggaagcca aagtggacta tggagttaca tacgcagccg aattcgtgcc tgcagttgaa
     1621 ggtggttaca ccgtgatcgt gcaaaagtca agaaagattg tagccagcac cgatgagcca
     1681 gtgatctgtg gaagcttcaa atgtggcgaa ccaggtaaag tggtgctcac ttttgacaac
     1741 caaacctcaa agaagaaaaa gctcttgtat aggagcaaga ccaaggtgac cactgattaa
     1801 gctccaagct ccatcaaatg ttgaagaatg taaccagcat gaagaacctt tggctacttg
     1861 tgaaattaca aaagtaggtt tcatttttgt tgggtcatgt tattattatt gttaaatttt
     1921 ttattcatgg atttatattt aatatctttg gggatttga
//
LOCUS       XM_071830427            2535 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840200), mRNA.
ACCESSION   XM_071830427
VERSION     XM_071830427.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2535
                     /gene="LOC139840200"
                     /note="uncharacterized LOC139840200; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840200"
     CDS             332..2464
                     /gene="LOC139840200"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686528.1"
                     /db_xref="GeneID:139840200"
                     /translation="MVNESSLSQIWGKKKLQVDYLSPESSLTQGDSDSESTSVSSSMR
                     SYISSATSSLDQNSSNVNGESHQNETLKKSFSKRFAKFGSFISSRRRAQSNLSQSSVS
                     VSDNSSTNVSQSSSIEVSDESSNYVQKPMPKFSRTGSLRSVKILRSKSKNRSTLKSKR
                     TSIDKKSEISENSHLEKATFSSILKDSKFPKDLKHQPGPLEPEQVLPVAKVCPYQHCS
                     LHGHHHHNHDPPKKRFEYLKKRASKDQKTVKTKSQPMDKSCIKKKDVKVTKKAFDQVD
                     DSIEFYAKSRSEPLSSYGYDEVEFADLLFGVNNFQEKKNELPVSNNLDLSDVYNKNDE
                     NLDGSKIDIEKKQSLKKTNHLSMWYMTHKHMASGLEAENGDKMVEQVDEEKKMKEKDI
                     DDATSQETEIRKMFAIKLVRDAIEKILLPEVQDDQSTTSEVISEQDLTVHSQIEYEIM
                     SDWKEKSMAAVGPAKRETEKRAPKRWSYLKKVILLAKFVKELEKVKSFSPKKVNHLRL
                     SPEIEPETVSLRRQTAGDKKNSDEWMLDYALQKVVGELASTQKRKVSLLVKAFETVAP
                     AQDDPQESRSDAEVHRVGSVTKSELVEMDSIKTNPSVVFDSDLEKEKHIKMWHLIYQH
                     VAKDIVTKLGSDLLDGDESTTDLLKFTQSDANKLVRESFLIRGWPDPTSIPMPLFTEW
                     VDYMAWFEDWRAREETKTRLNVIIASLV"
     misc_feature    <1355..2098
                     /gene="LOC139840200"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    1730..2029
                     /gene="LOC139840200"
                     /note="Plant calmodulin-binding domain; Region:
                     CaM_binding; smart01054"
                     /db_xref="CDD:214998"
     polyA_site      2535
                     /gene="LOC139840200"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accacccaat tattctccta atacagttcc aagtcttccc acatgcaaaa gtcttaattc
       61 aacattcatc aatcaacaca aaatccaaat tcaccaacta tcacgccacc gccaaatcat
      121 catcttgcca gcataaaatc atctttttgt ccgagcaaaa atacgcaaat atcacctact
      181 tcttgctcac ttcaaaaccc cattcatatt tcttgaattc atgatctcat tcatgtgatt
      241 tacagtatta ttttaataaa cgttttttgt caaaaagatt ggaacttttc atctgggtgt
      301 tgaatattcg aaggatcagt gactcaaaac aatggtaaat gaatcatctt tgagtcaaat
      361 ttggggaaaa aagaaactgc aagtggacta cctttcccct gaatcatctt tgactcaggg
      421 tgatagtgat tcggaatcca cttcggtttc ttcatcaatg cgaagctata tatcgagtgc
      481 aacatcttca cttgatcaaa atagcagtaa tgtcaatgga gaaagtcatc aaaatgaaac
      541 actaaaaaaa tcattttcaa aaagatttgc aaaatttgga agcttcatat catcaagaag
      601 gcgtgcacaa tcgaacctca gtcaatcttc agttagtgtt tcggataata gttcgaccaa
      661 cgtctcacag tcttcatcaa ttgaagtatc agatgaatca tctaattatg ttcagaaacc
      721 tatgccaaaa ttctcaagga caggtagtct gagatcagtc aagatcctta ggagcaaaag
      781 caagaaccgg tcaactctca aatccaaaag gacttcaatc gacaaaaaat cagaaatttc
      841 agaaaattcc catttggaaa aagccacttt ttcgtcaatt ctcaaagact caaagttccc
      901 taaagacctt aaacatcaac ccggaccatt agaacccgaa caagtactcc cggtagcgaa
      961 agtttgtcca taccaacatt gttctctaca tggtcatcat catcataatc atgatccacc
     1021 aaaaaagcga ttcgaatatc ttaaaaaacg cgcttcaaag gaccaaaaga ccgtgaagac
     1081 caaaagtcaa cccatggata aaagttgtat caagaaaaaa gatgtcaaag taacaaaaaa
     1141 ggcttttgat caagttgacg actctataga attctatgct aaatcaagat cagaacctct
     1201 ttcgagctat ggttatgatg aggttgagtt tgctgatctc ttatttggag tcaacaactt
     1261 tcaagaaaaa aagaatgagt tacccgtttc aaataatcta gatttaagtg atgtatacaa
     1321 caagaacgat gaaaatttag atgggtcgaa gattgatatt gaaaagaagc aatctttgaa
     1381 gaaaacgaac catcttagca tgtggtatat gacccataag catatggcat ctggtcttga
     1441 agcagaaaat ggagataaaa tggttgaaca agtagatgag gagaagaaaa tgaaagaaaa
     1501 agatattgat gatgctacga gtcaagaaac tgaaatccga aaaatgtttg caattaaact
     1561 cgtacgagat gctatcgaga agattcttct tcccgaagtt caagatgatc agtctactac
     1621 gagcgaagtt atatccgaac aagatctaac agtacatagt caaatcgaat atgaaattat
     1681 gagtgattgg aaagagaaat ctatggccgc agtggggccc gcgaaaagag aaacggaaaa
     1741 acgagctcca aagaggtgga gctacttaaa gaaagttatt ctgttggcaa agtttgtcaa
     1801 agaactagag aaagttaaga gctttagtcc gaaaaaggtt aatcaccttc ggttgtcgcc
     1861 ggaaattgaa ccggaaacgg tttctcttcg gcgacaaacg gccggtgaca agaaaaattc
     1921 cgacgaatgg atgcttgatt atgctcttca aaaggttgtt ggtgagcttg catcaactca
     1981 aaaaaggaaa gtttctttgc tcgtaaaagc attcgaaact gtggcccctg ctcaagatga
     2041 tccacaagaa tcaagatcgg acgctgaagt tcatagggtc ggttctgtaa caaaaagtga
     2101 actcgtagag atggattcta taaagacaaa tcctagtgtt gtgtttgatt ctgatttgga
     2161 gaaagaaaaa catataaaaa tgtggcattt gatatatcaa catgtagcaa aagatatcgt
     2221 tacgaaactt ggatccgatt tacttgatgg agacgaatca acaaccgatt tacttaaatt
     2281 cacccaaagt gatgcaaata agcttgttcg tgaatctttc ttgattagag gttggcccga
     2341 tcctacatca attcctatgc ctttatttac cgagtgggtt gattatatgg cgtggttcga
     2401 ggattggaga gcacgtgaag aaacgaagac tagattgaac gtgatcattg cttctttggt
     2461 gtaacatatt tggaggttta ggaatagcaa catcttcaat gcacgggcga tgaaaaagag
     2521 ttccattttt gattc
//
LOCUS       XM_071830428            1101 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840201), mRNA.
ACCESSION   XM_071830428
VERSION     XM_071830428.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1101
                     /gene="LOC139840201"
                     /note="uncharacterized LOC139840201; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840201"
     CDS             112..987
                     /gene="LOC139840201"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686529.1"
                     /db_xref="GeneID:139840201"
                     /translation="MEKIRRASHAGSWYTNNPQKLEEELDGWLTECGLTKSSDVRGVI
                     APHAGYSYSGRAAAFAFANIDPTNITRIFLLGPSHHHYTHKCLLSKATIYKTPIGDLP
                     IDLEVIEELKATGKFDMMDLDIDEAEHSMEMHLPYLVKVFRGYTVKVVPIMVGAVSAE
                     NEAMYGRLLAKYIDDPTNFFSVSSDFCHWGSRFNYLHYDKKHGAIHKSIEALDKMGME
                     IIETGDADEFKKYLIKTDNTICGRHPIRVFLHMSKNCSTKIKIKFLRYEQSSQCKSMR
                     DSSVSYASAVAKVDH"
     misc_feature    127..972
                     /gene="LOC139840201"
                     /note="Memo (mediator of ErbB2-driven cell motility) is
                     co-precipitated with the C terminus of ErbB2, a protein
                     involved in cell motility; Region: MEMO_like; cd07361"
                     /db_xref="CDD:153373"
     misc_feature    order(148..150,250..252,346..348,496..498,664..666,
                     673..675,829..831)
                     /gene="LOC139840201"
                     /note="putative ligand binding pocket/active site
                     [active]"
                     /db_xref="CDD:153373"
     misc_feature    order(250..252,346..348)
                     /gene="LOC139840201"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:153373"
     polyA_site      1101
                     /gene="LOC139840201"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgttcaataa acatctcact ctttactcat tgtcaaatac aatacgtctc ggtgggtgat
       61 tacagaatct caattttagg gtttcatcct ttaataattg taatcaaatt aatggaaaag
      121 atcaggagag catcgcacgc aggttcttgg tacaccaata atcctcagaa gttggaggaa
      181 gaacttgatg gatggcttac ggaatgtggt ttgaccaagt cttcagatgt acgtggtgta
      241 attgcgccac atgcaggtta ttcttattct ggccgagcag cagccttcgc atttgcgaat
      301 atcgacccaa ctaacattac tcgaattttt cttcttggtc catctcatca tcattacacc
      361 cataaatgtt tactttcaaa agcaacaatt tacaagactc caataggcga tctgcctatc
      421 gatctcgaag tcattgagga gctaaaagct accgggaagt ttgacatgat ggatcttgac
      481 attgatgagg ctgaacatag catggaaatg catttaccgt atctcgtcaa agtattccgt
      541 gggtatacag tgaaagttgt tccaattatg gttggtgctg taagtgctga aaatgaagcc
      601 atgtacggac gactgttagc aaaatatatt gatgacccga caaatttctt ttcggtgtca
      661 tcagatttct gtcattgggg ttctcggttt aattacttgc actatgacaa aaaacatgga
      721 gctatccata aatctatcga ggctttggac aaaatgggaa tggagatcat agaaaccgga
      781 gatgcggatg aattcaaaaa gtacttgata aaaaccgaca atactatttg tggacgtcac
      841 cccatccgcg tatttctcca tatgtcaaag aattgctcaa caaagataaa aataaagttt
      901 cttcgatatg agcagtcgag tcagtgcaaa agcatgagag acagcagtgt gagctatgcg
      961 tcggctgtag ccaaggtgga tcattaagtt cattgtgcat ctattttcta atcttatttt
     1021 catacatttg atctttgttt gtttcttgtc aataagatta catttgtgac ttttaattta
     1081 taaccgatgt ttatcattac c
//
LOCUS       XR_011757273            1162 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840202), ncRNA.
ACCESSION   XR_011757273
VERSION     XR_011757273.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1162
                     /gene="LOC139840202"
                     /note="uncharacterized LOC139840202; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840202"
     ncRNA           1..1162
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840202"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840202"
ORIGIN      
        1 gtgtgcaggc attttaacta gggtcattgt tatactaatg atggatttta atatattaat
       61 aacataagtt aactaattga taatatgcta tttcacctga tgattgcact ggctcattat
      121 atgcatttat tattcttcat ttagaatgtg ttttatagta aagtttgcta ctgattaatt
      181 tctaatcaag atatgttgca ccatttttag aacactgatg tatacacaaa tagggctact
      241 accgttgaag aagcatagtt atatgttgtt tgtcatacaa attgacctgg aagatggtga
      301 ctatcatgga attggaaatg tggtgtaatt ggacgagtga tatgagagtc aaggtataca
      361 cttattttat attagttaaa tagttagatg cttgaaaatg taagaatttt caggatgaac
      421 ttcatctgcg aatcaatgaa taaagccttc attctactac tgattgataa tcttacatca
      481 agctaccctt ttatgtcaag ggatttatac gagttcaagg gtggtcaccc cgaggcaccg
      541 agtgatcata tccaaattaa tgttcatttg gtttgtatgt gccatattac acgctactac
      601 actgagaaag acattcaaca attttaacgg gcttacttaa tgattacaca atacagttaa
      661 ctcatgatga tcagtatgct aagaacttaa gttcagaaaa gtccagtcaa ctatggtgat
      721 taacagagtt ttttttttct tcgtgggatt acttgcaggt caaagctaaa tctttaagtg
      781 ctatattagc atcattggac aacaaggtta tgtgtaattt gagaccgact aactggacaa
      841 ggctgtaccg aagacgtcag ttatttgctt gattgtggaa taacgagagg agcttgtatg
      901 ctaaaaatgg catttcccaa gtgccatggt cgatttcccg gtacatgcca agttcaaaaa
      961 tgaatccaaa attttatttt tttgtattct cgtcttccaa catcattttt catttactga
     1021 ttcgatatac tcaaatactc aaatcattta tataactcct ttttattcta tcatgttttg
     1081 tcttcatcat acagttactt caatttagtt tgattaagag ttcccgtgca acgcacgggc
     1141 tcttaaatct agtatttata ta
//
LOCUS       XR_011757274            1275 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840203), ncRNA.
ACCESSION   XR_011757274
VERSION     XR_011757274.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1275
                     /gene="LOC139840203"
                     /note="uncharacterized LOC139840203; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840203"
     ncRNA           1..1275
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840203"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840203"
ORIGIN      
        1 attgtataaa tcgtgaaaaa gaatcctata tgtcaatcct taaacactcc ttaatcagtt
       61 ttgcttacgt gttaatctca tatttaatca caattaacac taattacact acctaatatc
      121 cacgttggca acttaaattc acaatcacaa taaacgctgt agaaaacccc aatctctctt
      181 ctctctgctc tccgattatc tcctgcaaac caatacctcg atccatctcc tgcaaaccca
      241 aactgaattg aatcaatatt tattatcctc cgcccgaatc aattttttcg aagcagatcc
      301 aacggattcg tgtttattag tctccgcctg atggaatgtt atcttcgatc ctttcatatt
      361 gacggagtat cttatccatc gatatatgtt actgctcaga gtttcttccc atcttcaagg
      421 tggaatccat cattgttgtt gagagggata aactgaaaaa tgacagaaga tctacttaca
      481 atctgggatg atgtaagttc tgcttgactg atctacttgt atgataattg taaatatttt
      541 tgccccattc aaaacagtaa tatgcagtgc tttacaagta actttatttt tcttatatat
      601 tcgtctaaac gttttggttg tctcaacaaa tttaaccagg ctaaactggg aaggtcaggc
      661 cccttttgct atttttagag gtggaaattt tgactctttt gtttagtggt gttgatttgg
      721 gacatttata ttctcagatg ggtccaataa aatattctga taatgtgaaa caactcaaat
      781 actttggaag ccatcttaaa ccaatatgtg ctgtttgttt tccttctttt tagtatgttc
      841 agtcaaacct gtatgctatt tactattgtt ttgtaatact gagactgttg ttacgttgat
      901 ttgatgagta atgttagtag tagcagtata ttagtgtcat ggcaagtaga aagcgtcaaa
      961 aggggtcttc ggctgaagtc cattcgcctc tgccatcgct atttcacccg ccgagtaatg
     1021 ttaatcatcg ttatttcacc cactgccatc gctgcctctg cttgctatcc ccttaacctt
     1081 aaccgttcgt gttctgcgat taaggatttt cgtttgtgga gaaggtggtt ttttcttcac
     1141 gattaaccga ttccaggatt gtttgagacg gttatgttcg ttttcagctt cttaacaatc
     1201 atcaagataa cgaatcgtag tcgatggaat caattcacaa gaataccgat ttgtatacag
     1261 gtttgcgtta tcgat
//
LOCUS       XM_071830429             875 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein EARLY RESPONSIVE TO
            DEHYDRATION 15-like (LOC139840204), mRNA.
ACCESSION   XM_071830429
VERSION     XM_071830429.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..875
                     /gene="LOC139840204"
                     /note="protein EARLY RESPONSIVE TO DEHYDRATION 15-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139840204"
     CDS             134..619
                     /gene="LOC139840204"
                     /codon_start=1
                     /product="protein EARLY RESPONSIVE TO DEHYDRATION 15-like"
                     /protein_id="XP_071686530.1"
                     /db_xref="GeneID:139840204"
                     /translation="MTIATTQRSSTLNPNAPLFVPAAVRQVEDFSAEWWDLVTTSTWF
                     HDYWLSQQQGEGGFFENTEGEFDFTDVADLLPDSIDADEDTLIMESQYEQFLLSTEME
                     RRNAHAPNSFKHIPTIGLELDVKPRERGPKSPVEIARYREKPAKIVSPKSRTQRIQQP
                     R"
     misc_feature    155..>196
                     /gene="LOC139840204"
                     /note="Ataxin-2 C-terminal region; Region: PAM2;
                     pfam07145"
                     /db_xref="CDD:429316"
     polyA_site      875
                     /gene="LOC139840204"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tataaataag tatgcgtatc tgtacatctt cgcatcttat ctcataaccc gagccaaaac
       61 ctccgaacct caaattgctt tttagatatt tttcactcaa tcgatcatca tcgaagatta
      121 actacagaaa aggatgacaa tagctacaac acaaagatct tcaacgctca atccaaacgc
      181 accattattc gtccctgctg ctgttcgcca agtcgaagat ttctctgcag aatggtggga
      241 cctggtcaca acatccacgt ggtttcatga ctactggctt agccagcaac agggcgaagg
      301 tggtttcttt gaaaacaccg aaggcgaatt tgatttcact gacgttgcag atcttcttcc
      361 tgattcaatt gatgctgatg aagatacctt aatcatggag tcacaatatg aacaattcct
      421 cctttcaact gaaatggaaa ggcgaaacgc tcatgctcca aattctttca agcacattcc
      481 taccattggt ttggaattgg atgtgaaacc aagggaaagg ggtccaaagt caccagtgga
      541 aattgctagg tatagggaga aaccagcaaa aatagtaagc ccaaaatcac gcacacaacg
      601 cattcagcaa cctcgttaaa tgttgtaaat ttataaagat ttctctggtc taggttagct
      661 ttcagtttcg tataatccgg tgttgaacaa ctggagttgt gtcttttgtt tattgtaagt
      721 ttgtgtacag agcaaggtct ctagctgtcg tcgttggtta tttagccttg ttcgtttttt
      781 gatatcggtt cattttaact agccagggaa atgtaaagat aattgtaaaa gaattaaaga
      841 agtagaaatt cacgaagcag ttggcatcgt ctgaa
//
LOCUS       XM_071830430            2408 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840205), mRNA.
ACCESSION   XM_071830430
VERSION     XM_071830430.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2408
                     /gene="LOC139840205"
                     /note="uncharacterized LOC139840205; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840205"
     CDS             213..2174
                     /gene="LOC139840205"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686531.1"
                     /db_xref="GeneID:139840205"
                     /translation="MDAGGRAKFSVYQNPALSTALTNNSLRPSISTFIFILSLTSASA
                     FSLFSFIIRENDIVYSSKFRYVTQDLAYFLLKVTQAVVALVLIGSFLALIKAISLWNS
                     KATQPASTSNKQLNLTNRQLGLLGIKSKYPQAESKPSKEPPKANSSPSNTLVPLHQSF
                     TNSGSITRMSSGKSTMNNGNKMHSFNTPSKPPVSSFYLVPSQSPTMKTPPSTDPTVST
                     PWSSKRASSTKEISSEKQLETFLADFDEKFNMSAGKMATPTSNTNGFGVSSPNTNTSG
                     TTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIDAFERLGVYPQIEQWRDH
                     LRQWFSSVLLNPLLAKIETSHVKVMDAAAKLGISVTISKIGIDSTIGAATASVSSNER
                     NVDWQPAYTLDEESLLLQLRTTLVQTVDASISRATLGAFQQLPAQNISVPVIQDCIDI
                     ITEHLKLLALVKGEWAKGLLPQSSIRAEYTVQRIRELAAGTCVKKYEYVTIKESLNKK
                     WTEVPTDSHLLLYLFCAFLEHPKWTLHVDPTCHAGVQSTKNPLFLGVLPPKERFPEKY
                     LAVISGVPSVLHPGACLLTVGKQIPPIFALYWDKKPQFAFEGRTALWDSVLLLCHKIK
                     SDYGGIVRGMHLGSSAFGILPILDEDNSE"
     misc_feature    234..2156
                     /gene="LOC139840205"
                     /note="Cytochrome B561, N terminal; Region:
                     CytochromB561_N; pfam09786"
                     /db_xref="CDD:462899"
ORIGIN      
        1 tctttcattg ctgtgggatt tcatgttctc cttttggaga ggtcgatctt gttccataac
       61 gacacattta caagatgctt aaatgttaaa accatgtccc gaagtctatt ggaaacaaag
      121 cattccttat ttgatatttc gattcaaggt ggaataatcg gttcaatcga gtgaaaccct
      181 aactcatcga attttcaaat tacactgaaa taatggacgc cggaggacga gcgaagtttt
      241 cagtgtatca gaatccagct ctctcaactg ccctaactaa caacagtctc cgtccttcaa
      301 tctcgacatt catcttcatt ctttctttaa catctgcttc tgccttctct ctcttctctt
      361 tcattatcag ggaaaatgat attgtttaca gttcgaagtt cagatatgtt actcaagacc
      421 ttgcttattt tcttttgaaa gtgacgcagg ctgtcgtggc tttggttctg attggctcgt
      481 ttttggcgct tatcaaagcc atttcgttat ggaattcaaa agctactcaa cctgcatcta
      541 cttctaataa acagctaaat ctgacaaatc gacaattggg gctgttggga ataaaatcga
      601 agtatccgca ggctgaatcg aagccttcaa aagagccacc caaagctaat tcatcacctt
      661 cgaatacgct tgtccccctt caccaatcgt ttacaaattc aggcagtata acccgtatga
      721 gcagcgggaa atcaactatg aataacggaa acaagatgca ttcatttaac accccgtcta
      781 aaccaccagt ttcatcattc tatcttgtcc cttcacaatc accaactatg aaaacaccac
      841 cgagcacgga ccccaccgtt tctactcctt ggtcaagtaa acgagcatct tctaccaaag
      901 aaatatcatc agaaaaacag ctcgaaacat ttttggctga ttttgatgaa aagtttaaca
      961 tgtctgctgg taaaatggct actccaactt ctaatacaaa cgggtttggt gtatctagcc
     1021 ccaatacaaa cacttctggt actacaagaa gcacaccgtt aagacccgta cgaatgtctc
     1081 ccggttctca aaagttcagt acgccaccga aaaaagggga aggtgattta cctccaccta
     1141 tgtccatgga agagtcgatt gatgcttttg agcgcttagg tgtctatcca caaattgagc
     1201 agtggcgtga ccatctcagg cagtggtttt cttcggtttt gttgaatccc ctacttgcaa
     1261 aaattgaaac tagccatgtt aaggttatgg atgctgctgc aaagcttggt atttctgtta
     1321 caattagcaa aataggaatc gattcgacaa taggagctgc aactgcaagt gtatcttcaa
     1381 acgaaagaaa tgtcgattgg cagcctgcat atactcttga tgaagaaagc cttcttcttc
     1441 agttgcgcac tactcttgtc caaactgttg atgcttccat ttcaagggct actctaggtg
     1501 ccttccaaca gttgccagca cagaatattt cggtcccagt catacaagat tgtatagata
     1561 taatcactga acacctgaag cttcttgctt tagtgaaagg ggaatgggca aaaggcttgc
     1621 ttccacagag cagtatacga gcagagtata cggtacagag aatccgagag cttgcggcag
     1681 ggacatgcgt aaagaagtac gagtacgtca caatcaaaga gagtttgaat aaaaaatgga
     1741 ccgaagttcc tacagactct catttgttgc tgtatttatt ttgtgcattc ttggaacacc
     1801 caaagtggac cctacatgtg gatcctacat gtcatgcggg tgtacagtct accaagaacc
     1861 ctttattttt aggtgtcctt ccaccaaaag aacgttttcc ggagaagtac ttggccgtta
     1921 tttctggagt cccttcggtg cttcatcccg gagcttgttt gttgactgtt ggcaaacaaa
     1981 ttcccccaat ctttgctttg tattgggata aaaagcccca gtttgctttt gaggggagaa
     2041 cagcactttg ggactctgta ttgcttttat gccacaagat taagtccgat tatggtggca
     2101 ttgttagagg aatgcatcta ggttcatcgg cctttggtat tcttccaatc cttgatgaag
     2161 ataacagtga gtgatgtttt cgtatattct tgaaattcac ttcaattgag atcatcaact
     2221 ttgattttct tgagatgcta gcccgtacat gttattgtta ttaacgattc tagtgactaa
     2281 ttatgttaga ggtagtagta atgcaatcag gcatcgttga tatgttagtc tagagaaggg
     2341 taatcaacaa ttgtaataac tattatgaaa aatagcacat tgaaattttg tgggctgcta
     2401 tgcatatt
//
LOCUS       XM_071830431             901 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FATTY ACID EXPORT 1,
            chloroplastic-like (LOC139840206), transcript variant X1, mRNA.
ACCESSION   XM_071830431
VERSION     XM_071830431.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..901
                     /gene="LOC139840206"
                     /note="protein FATTY ACID EXPORT 1, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139840206"
     CDS             75..764
                     /gene="LOC139840206"
                     /codon_start=1
                     /product="protein FATTY ACID EXPORT 1, chloroplastic-like
                     isoform X1"
                     /protein_id="XP_071686532.1"
                     /db_xref="GeneID:139840206"
                     /translation="MSSLISRSSCFSAIYTPLHPRNRSHLPILRSTALMMMNNDGRAI
                     KASGLEFRPALNHTSKGHFDVLGKASSSTTEYVNGEEIDREEINEPVEDSVSEQQRSA
                     KIHDFCFGIPYGGIVLIGGLVGYIFSRNTAVLMTGGLYGGAVLALSILSLKIWSQGQS
                     SIPFILGQTGVAAALLWKNIQTYSLTKKILPTGFSIVLSAAMLCFYSYVMLSGGNPPP
                     KKLKSVAASQS"
     misc_feature    399..686
                     /gene="LOC139840206"
                     /note="Transmembrane proteins 14C; Region: Tmemb_14;
                     pfam03647"
                     /db_xref="CDD:461004"
     polyA_site      901
                     /gene="LOC139840206"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gactaaaaaa cgcacataat cagacctctg ttttcgagat tcataacgag attgcaacaa
       61 aaatcatacc caaaatgtca tcactaatct cccgatcatc atgtttctcc gcaatttaca
      121 ctccattaca tccccgtaat cgatcacacc tccctattct tcgttctacg gcattaatga
      181 tgatgaataa tgatgggcgt gccataaaag catctggttt agagtttagg ccagctctaa
      241 atcatacatc aaaagggcat tttgatgttt tagggaaagc tagttcaagt actactgaat
      301 atgtcaatgg agaagagatt gatagagaag agattaatga accagttgaa gattcagtct
      361 ctgaacaaca acgatcagca aagattcatg atttttgttt tggtattccg tatggtggca
      421 ttgttttgat tgggggactc gtgggttata ttttctcaag aaacactgct gttttgatga
      481 ccggtggact ctatggaggt gctgttttgg cacttagcat tttaagtctc aaaatctgga
      541 gtcaaggaca gtccagcata ccattcattc ttggacaaac tggagttgct gctgcgcttc
      601 tctggaagaa cattcaaacc tattcattga caaagaagat cttacccact ggattcagta
      661 tcgtcttgag tgctgcaatg ctatgcttct acagttacgt tatgctatcg ggaggaaacc
      721 cacctccaaa gaaattgaag tctgtggctg catctcaatc ttagtgagta tcccaatggc
      781 gatattagtt ggataaattt tatattgttt gtgtgtgttg ttaatggggg gataccttct
      841 agtagaacta tatgagacac gtacatgaac attcgggtat ggcatggtta attttatcgt
      901 a
//
LOCUS       XM_071830432            1015 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FATTY ACID EXPORT 1,
            chloroplastic-like (LOC139840206), transcript variant X2, mRNA.
ACCESSION   XM_071830432
VERSION     XM_071830432.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1015
                     /gene="LOC139840206"
                     /note="protein FATTY ACID EXPORT 1, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139840206"
     CDS             75..764
                     /gene="LOC139840206"
                     /codon_start=1
                     /product="protein FATTY ACID EXPORT 1, chloroplastic-like
                     isoform X2"
                     /protein_id="XP_071686533.1"
                     /db_xref="GeneID:139840206"
                     /translation="MSSLISRSSCFSAIYTPLHPRNRSHLPILRSTALMMMNNDGRAI
                     KASGLEFRPALNHTSKGHFDVLGKASSSTTEYVNGEEIDREEINEPVEDSVSEQQRSA
                     KIHDFCFGIPYGGIVLIGGLVGYIFSRNTAVLMTGGLYGGAVLALSILSLKIWSQGQS
                     SIPFILGQTGVAAALLWKNIQTYSLTKKILPTGFSIVLSAAMLCFYSYVMLSGGNPPP
                     KKLKSVAASQS"
     misc_feature    399..686
                     /gene="LOC139840206"
                     /note="Transmembrane proteins 14C; Region: Tmemb_14;
                     pfam03647"
                     /db_xref="CDD:461004"
     polyA_site      1015
                     /gene="LOC139840206"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gactaaaaaa cgcacataat cagacctctg ttttcgagat tcataacgag attgcaacaa
       61 aaatcatacc caaaatgtca tcactaatct cccgatcatc atgtttctcc gcaatttaca
      121 ctccattaca tccccgtaat cgatcacacc tccctattct tcgttctacg gcattaatga
      181 tgatgaataa tgatgggcgt gccataaaag catctggttt agagtttagg ccagctctaa
      241 atcatacatc aaaagggcat tttgatgttt tagggaaagc tagttcaagt actactgaat
      301 atgtcaatgg agaagagatt gatagagaag agattaatga accagttgaa gattcagtct
      361 ctgaacaaca acgatcagca aagattcatg atttttgttt tggtattccg tatggtggca
      421 ttgttttgat tgggggactc gtgggttata ttttctcaag aaacactgct gttttgatga
      481 ccggtggact ctatggaggt gctgttttgg cacttagcat tttaagtctc aaaatctgga
      541 gtcaaggaca gtccagcata ccattcattc ttggacaaac tggagttgct gctgcgcttc
      601 tctggaagaa cattcaaacc tattcattga caaagaagat cttacccact ggattcagta
      661 tcgtcttgag tgctgcaatg ctatgcttct acagttacgt tatgctatcg ggaggaaacc
      721 cacctccaaa gaaattgaag tctgtggctg catctcaatc ttaatatcag agatggttca
      781 ttgggctatg gagaaatatg tcatttttac ttggtattat tgaagccagc ttctttcatt
      841 gctgtgggat ttcatgttct ccttttggag aggtcgatct tgttccataa cgacacattt
      901 acaagatgct taaatggttg gttctataga ctttttacaa tatgtacaat ttattaacac
      961 caaaaatttt attgataaac gactagcttg aaatattaca gaggacatta accaa
//
LOCUS       XM_071830433            1469 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840207), mRNA.
ACCESSION   XM_071830433
VERSION     XM_071830433.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1469
                     /gene="LOC139840207"
                     /note="uncharacterized LOC139840207; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840207"
     CDS             191..1096
                     /gene="LOC139840207"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686534.1"
                     /db_xref="GeneID:139840207"
                     /translation="MVELGQTDTEVYAPKKSLQVWRTLLNWLAFFFQIFIQIIRATPN
                     LINYSSYSSHSSPSFEPLPVIELSESVETPSSYAASTVHIPPAGPDYDRSQKLTVVLD
                     LDETLVCAYETCSLPAIVRNQAIDAGLKWFELECISSDKECEGKPKVNYVTVFERPGL
                     HEFLTELSTFADLVLFTAGLEGYAKPLVDKIDAENKFSRRLYRPSTSSTEFREHVKDL
                     SCISTNFCRIVIVDNNPFSFLLQPVNGIPCIPFSAGQPHDDQLLEVLLPLLKQLSEQA
                     DVRPMLYEKFHMPEWFHKHGIPPSV"
     misc_feature    476..970
                     /gene="LOC139840207"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; Region: Haloacid Dehalogenase-like Hydrolases;
                     cl21460"
                     /db_xref="CDD:473868"
     misc_feature    order(494..508,518..523,716..727,737..739,836..838,
                     884..889,893..901)
                     /gene="LOC139840207"
                     /note="active site"
                     /db_xref="CDD:319823"
     polyA_site      1469
                     /gene="LOC139840207"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacggcaact ttgcacaatc cccactccca cccttaaagc gcgtgtcata cactctcaac
       61 ccccatcgtc ttcttgcacc aatacaaaaa ccaaatcaaa atcttcttct atctaatctt
      121 ctatataaat aaataaaata agtgaccatt tgtgcgtgta actaactgtg tgtattatat
      181 ttatctggtg atggtggagc taggtcaaac agatacagaa gtatacgcac caaagaaaag
      241 cttacaagta tggcgaacgc tattgaattg gttagctttt ttctttcaga tcttcattca
      301 gatcattaga gctactccta acttaatcaa ttattcatcg tattcatcgc attcatcgcc
      361 gtcgtttgaa ccgttgccgg tcattgaatt gtcggaatct gttgaaactc cgtcatcgta
      421 tgctgcttct accgtacata ttccgcctgc cggtccggat tatgatcgtt cacaaaaact
      481 caccgtagtt cttgacttgg atgaaacttt ggtttgtgca tatgagactt gtagtttgcc
      541 tgccattgtt cgtaatcaag ctatagatgc tgggttaaag tggtttgagt tagaatgtat
      601 ctcatcagat aaggaatgtg agggcaaacc caaggtaaac tacgtgacgg tatttgaacg
      661 tcccggattg catgaatttc taactgaact tagtacattt gctgatcttg tcctctttac
      721 tgctggtctt gaaggctacg ctaaaccact tgttgataaa atagatgctg aaaacaaatt
      781 tagtcgcaga ctttatcgac cttcaacaag ctccacggaa ttcagggaac atgtgaagga
      841 tctttcgtgt atatcaacta acttctgccg aattgttatt gtcgacaaca atccattcag
      901 tttcttatta caaccagtca atggcatccc ctgcatacct ttttctgctg gacaaccaca
      961 cgatgatcag cttctcgagg tccttcttcc tcttttaaag caactttctg agcaagccga
     1021 tgttcgaccc atgctatatg aaaagtttca catgcctgaa tggtttcata aacacggaat
     1081 acctccttct gtgtagccaa cacaacgata aacctaaaca tcattacaga gtagaagctt
     1141 tttgttctta atttagaggt acctaaaaca gctttctcaa gatggtgaca ttttagatgt
     1201 tatgggtcgg tgattaaatt aaaagggcag cgtcagttct tcgaagtacc acattttgta
     1261 tagactagtt attgtctaca gttatcgatt cccttgatag atctgcgaaa cactatttat
     1321 aagctgattt attcttgtat aagtaactaa tttggtactg tatataggtt gctagatggt
     1381 gtcttattat gattttcggt atgattccaa taccaaagtc ttgtaaactc gtcttagatc
     1441 aataaatata tgacactgtt ttgtctcta
//
LOCUS       XM_071830434             873 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycosyltransferase-like
            KOBITO 1 (LOC139840208), mRNA.
ACCESSION   XM_071830434
VERSION     XM_071830434.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..873
                     /gene="LOC139840208"
                     /note="glycosyltransferase-like KOBITO 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139840208"
     CDS             1..873
                     /gene="LOC139840208"
                     /codon_start=1
                     /product="glycosyltransferase-like KOBITO 1"
                     /protein_id="XP_071686535.1"
                     /db_xref="GeneID:139840208"
                     /translation="MDWIIHLDTDELMHPVGTRGYSLTQLLSDVPENVDMVVFPSYES
                     CVERDDINEPFTEVSMFKKNYEHLTKETYSQNYKESVRDNPGYFLTYSNGKSAARIQP
                     HLRPNGAHRWYNYMKQPNEITFEEAAILHYTYAKFSDLTSRRDRCGCKPTIEGVTKCF
                     FLDFDRAAFIIASSATEDEMLNWYRKHVVWMDKDLNKKLLKEGILTRIYAPMVIMQEL
                     KEYGVYSSLIESVQESLSKDTFMSSNEIINNSSRRIGTEESGISVRNDLQADNIDLVA
                     IPPLPAPVIDYINS"
ORIGIN      
        1 atggattgga taattcatct ggatacagac gagttaatgc atccagtggg cactcgggga
       61 tactctctta cacaactttt atcggacgtt cctgaaaacg ttgatatggt tgtgtttcca
      121 agctacgaga gctgtgttga acgagacgac ataaatgaac ctttcaccga ggtctcaatg
      181 tttaaaaaaa attatgaaca tcttacgaag gaaacgtact ctcagaatta caaagaatcg
      241 gttcgtgata atccgggcta ctttttgaca tattcaaatg ggaagtcggc tgcccgtatc
      301 caaccacatt tacgtcctaa tggtgcacat aggtggtata actatatgaa gcaaccaaac
      361 gaaataacat ttgaggaggc tgcgattctt cattacacct atgccaagtt ttcggatttg
      421 acatcaaggc gtgatcgatg tggctgcaag cctacaatag aaggtgttac aaaatgcttc
      481 tttttggatt ttgatagagc tgcttttata attgcatcaa gtgctacaga ggatgaaatg
      541 ctaaactggt accgcaaaca tgttgtgtgg atggacaaag atctaaataa gaagcttcta
      601 aaagaaggaa tcttaacccg catatatgct cctatggtga ttatgcaaga attaaaggag
      661 tatggtgttt acagttctct gattgagtct gtccaggaaa gtctatctaa ggacacgttt
      721 atgtcatcaa atgaaataat taataattca tcgaggagaa ttggtacaga agaatcaggt
      781 atatctgtta ggaatgattt acaagcggat aatattgatt tagttgcaat accaccactc
      841 cctgctccag taattgatta tataaacagt tag
//
LOCUS       XM_071830435            1560 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840209), transcript variant X1, mRNA.
ACCESSION   XM_071830435
VERSION     XM_071830435.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1560
                     /gene="LOC139840209"
                     /note="uncharacterized LOC139840209; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840209"
     CDS             66..1307
                     /gene="LOC139840209"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686536.1"
                     /db_xref="GeneID:139840209"
                     /translation="MTGSHLLHQLHLILDSDPFIDEVGFVHPSQFAAISDSSISMKSD
                     DATDMAFWSRDHKLGISTDVLHTLYTDAKHAFMSSLDQYRKLIDLHATNLGLDGDNIS
                     NYSSSLATVEGELMKHSRVLLLLSCDFGTAWNCRKEVVVKKHETNLYLDELRFSCLVL
                     SYAPKSDRAWSHRRWVIKMIASKCTVLQDVLKNESELAKKIAEKSKMNYRAWNHRCWL
                     VSYMPANQVIDELVKYRDWAGLHVADNSCFHYRTRLMTRTLEESWRKQDSKNSPEHTA
                     EVYELWKEELAWCEILIKRYIGRESLWLYRRFLSLCWIKHFAARMGGTHIDVFMDNEL
                     QLFRSCTTIPDNVFEDYQSQAMFAATYMMWLIKQMDEARGVEAGEKVGEELEVVLNKV
                     CPHKAFLWDLARTKNGTLVGE"
     misc_feature    450..>851
                     /gene="LOC139840209"
                     /note="Protein prenyltransferase, alpha subunit
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: BET4; COG5536"
                     /db_xref="CDD:227823"
ORIGIN      
        1 tctcaaattt gagtctctaa gattgttata attgtgaaga gggttatcgg cgccggaaat
       61 ttctcatgac cggatcacat cttctccatc agttacactt gattctcgat tcggatccat
      121 tcattgatga agtagggttt gttcatccat cccagtttgc tgctatcagt gactcatcta
      181 tatcaatgaa atctgatgat gctaccgata tggctttctg gagtagggat cacaagctgg
      241 gtatctcaac tgatgtgttg cacacgttat acactgatgc taaacatgca tttatgtctt
      301 cactagatca gtatagaaag ttgattgatt tgcatgcaac aaatttggga ttagacggtg
      361 ataatatttc aaattattca tcttccttgg ccactgttga aggagaatta atgaagcata
      421 gcagggtact tttgctgctg agttgtgatt ttggaactgc atggaattgc aggaaggaag
      481 ttgttgtaaa gaagcatgag actaatttat atctcgacga gcttcgattt tcatgtttgg
      541 ttttgtcata tgcaccaaaa agcgaccgtg cttggagcca taggcgatgg gtgatcaaga
      601 tgatagctag caagtgtaca gttctgcaag acgttttgaa aaatgaatct gaattagcca
      661 aaaaaatagc agagaagtca aagatgaact accgtgcatg gaatcatcga tgctggttag
      721 tttcttacat gcctgcgaat caggtaatcg atgagttggt taaatatcgg gattgggctg
      781 ggttacatgt tgctgataac tcatgctttc actatcgaac gcggttaatg accaggacgt
      841 tggaagaatc atggcgtaaa caagattcaa aaaatagccc tgaacataca gcagaagttt
      901 atgaactttg gaaggaagag cttgcctggt gtgagattct aattaagcga tacataggac
      961 gagagtccct atggctttat cgtcgtttcc tctccctgtg ttggataaag cattttgcag
     1021 ctcgtatggg agggacacac atagatgtgt ttatggataa tgaattacaa ctatttcgtt
     1081 catgtacaac tatcccagat aatgtatttg aggattatca atcacaagca atgtttgcag
     1141 caacttatat gatgtggttg atcaagcaaa tggatgaagc tcgaggtgtg gaggctggtg
     1201 aaaaggtagg agaagaactt gaagtggtgt tgaataaggt atgcccacat aaggcttttc
     1261 tttgggatct tgcgaggact aaaaacggaa cgctggttgg tgaatgatat gtttctttgg
     1321 tttgggattg atctgtatgt tgtctttttt tagggttttt ttgttttttt ttacagtgtt
     1381 tatgttattg aggaattgtt attcaggaga taagtatagg agataattat tgagtgagaa
     1441 taaaagaaag acatagaaga atagaagcac aattgatata tgctagctct atctatatat
     1501 tcaaggttta agaacaaagt caagccaata aaaatgttgt ggtttaagtt gatattatct
//
LOCUS       XM_071830436            1168 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840209), transcript variant X2, mRNA.
ACCESSION   XM_071830436
VERSION     XM_071830436.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1168
                     /gene="LOC139840209"
                     /note="uncharacterized LOC139840209; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840209"
     CDS             66..1019
                     /gene="LOC139840209"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686537.1"
                     /db_xref="GeneID:139840209"
                     /translation="MTGSHLLHQLHLILDSDPFIDEVGFVHPSQFAAISDSSISMKSD
                     DATDMAFWSRDHKLGISTDVLHTLYTDAKHAFMSSLDQYRKLIDLHATNLGLDGDNIS
                     NYSSSLATVEGELMKHSRVLLLLSCDFGTAWNCRKEVVVKKHETNLYLDELRFSCLVL
                     SYAPKSDRAWSHRRWVIKMIASKCTVLQDVLKNESELAKKIAEKSKMNYRAWNHRCWL
                     VSYMPANQVIDELVKYRDWAGLHVADNSCFHYRTRLMTRTLEESWRKQDSKNSPEHTA
                     EVYELWKEELAWCEILIKRYIGREIMYLRIINHKQCLQQLI"
     misc_feature    450..>851
                     /gene="LOC139840209"
                     /note="Protein prenyltransferase, alpha subunit
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: BET4; COG5536"
                     /db_xref="CDD:227823"
ORIGIN      
        1 tctcaaattt gagtctctaa gattgttata attgtgaaga gggttatcgg cgccggaaat
       61 ttctcatgac cggatcacat cttctccatc agttacactt gattctcgat tcggatccat
      121 tcattgatga agtagggttt gttcatccat cccagtttgc tgctatcagt gactcatcta
      181 tatcaatgaa atctgatgat gctaccgata tggctttctg gagtagggat cacaagctgg
      241 gtatctcaac tgatgtgttg cacacgttat acactgatgc taaacatgca tttatgtctt
      301 cactagatca gtatagaaag ttgattgatt tgcatgcaac aaatttggga ttagacggtg
      361 ataatatttc aaattattca tcttccttgg ccactgttga aggagaatta atgaagcata
      421 gcagggtact tttgctgctg agttgtgatt ttggaactgc atggaattgc aggaaggaag
      481 ttgttgtaaa gaagcatgag actaatttat atctcgacga gcttcgattt tcatgtttgg
      541 ttttgtcata tgcaccaaaa agcgaccgtg cttggagcca taggcgatgg gtgatcaaga
      601 tgatagctag caagtgtaca gttctgcaag acgttttgaa aaatgaatct gaattagcca
      661 aaaaaatagc agagaagtca aagatgaact accgtgcatg gaatcatcga tgctggttag
      721 tttcttacat gcctgcgaat caggtaatcg atgagttggt taaatatcgg gattgggctg
      781 ggttacatgt tgctgataac tcatgctttc actatcgaac gcggttaatg accaggacgt
      841 tggaagaatc atggcgtaaa caagattcaa aaaatagccc tgaacataca gcagaagttt
      901 atgaactttg gaaggaagag cttgcctggt gtgagattct aattaagcga tacataggac
      961 gagagataat gtatttgagg attatcaatc acaagcaatg tttgcagcaa cttatatgat
     1021 gtggttgatc aagcaaatgg atgaagctcg aggtgtggag gctggtgaaa aggtaggaga
     1081 agaacttgaa gtggtgttga ataaggtatg cccacataag gcttttcttt gggatcttgc
     1141 gaggactaaa aacggaacgc tggttggt
//
LOCUS       XM_071830437            2489 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor protein kinase-like
            protein ZAR1 (LOC139840210), mRNA.
ACCESSION   XM_071830437
VERSION     XM_071830437.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2489
                     /gene="LOC139840210"
                     /note="receptor protein kinase-like protein ZAR1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139840210"
     CDS             178..2289
                     /gene="LOC139840210"
                     /codon_start=1
                     /product="receptor protein kinase-like protein ZAR1"
                     /protein_id="XP_071686538.1"
                     /db_xref="GeneID:139840210"
                     /translation="MLLPAFVLSIFLILCNSHFIVHVTCLNDEGYTLLTFKQSITQDP
                     DGSLNNWNYSDETPCSWNGIACKELKVISVSIPKKKLLGFISPVLGSLPELRHVNLRN
                     NKFMGSLSFELFNAEKLQSLVLYGNSLSGSIPNEISRLSYLQTLDLSSNFFNGSLPIS
                     MIQCKRLRSLDLSQNNFTGSLPNGFGSNLGFLETLDLSFNWFMGSIPEDLGNLSFLQG
                     TVDLSHNLFNGSIPPSLGNLPEKVYIDLTYNNLSGPIPQNGALVNRGPTAFIGNAGLC
                     GPPLKNLCFPNDASSPSSYPYIPNNNPSETPEKGRKGLSKSGVIAIIISDVIGICLIG
                     LVLSYCYTRICPCGKRNHRYEKGGVKKRNECLCFSKDESETLSEHVEQYDLVALDTQL
                     GFDLDELLKASAFVLGKSGIGIVYKVVLEDGVTLAVRRLGEGGSQRFKEFQTEVEAIG
                     KLKHPNIVTLRAYYWSVDEKLLIYDFVPNGNLGAAIHGKPGVPSFVPLSWSVRLKIMR
                     GTAKGLVYLHEFSPKKYVHGGLKPSNILLDVNMEPQISDFGLGRLANIAGGGTPVLQS
                     TRVGSEVATTTATATSASVSNTHASYYQAPEAFKVLKPSQKWDVYSFGVVLLEMITGK
                     SPVVQVGPEEMDLVHWIQVCIDEKKPLSDVLDPGLVADSDKEEEIIAVLKIAMGCTQI
                     NPERRPSMRHVADVLDRLSQY"
     misc_feature    253..375
                     /gene="LOC139840210"
                     /note="Leucine rich repeat N-terminal domain; Region:
                     LRRNT_2; pfam08263"
                     /db_xref="CDD:462411"
     misc_feature    <403..2283
                     /gene="LOC139840210"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    460..531
                     /gene="LOC139840210"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    532..603
                     /gene="LOC139840210"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    676..750
                     /gene="LOC139840210"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    751..822
                     /gene="LOC139840210"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    823..897
                     /gene="LOC139840210"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    898..966
                     /gene="LOC139840210"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1396..2277
                     /gene="LOC139840210"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1396..1410,1420..1422,1456..1458,1462..1464,
                     1549..1551,1597..1608,1618..1620,1624..1626,1762..1764,
                     1768..1770,1774..1779,1783..1785,1816..1818,1825..1827,
                     1942..1953)
                     /gene="LOC139840210"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1396..1410,1420..1422,1456..1458,1462..1464,
                     1549..1551,1597..1608,1618..1620,1762..1764,1768..1770,
                     1774..1779,1783..1785,1816..1818)
                     /gene="LOC139840210"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1408..1410,1618..1620,1624..1626,1762..1764,
                     1768..1770,1774..1776,1825..1827,1942..1953)
                     /gene="LOC139840210"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1813..1836,1885..1890,1936..1953)
                     /gene="LOC139840210"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 accctctctc tagagcctcc attactgttc ttaaaaacct tacttcctca ctgcaacttt
       61 caacttgcta ctacccattt tcttgattca tcaccataaa ggtaacatct ttcacaaaaa
      121 ggtacaaact ttgcccatac ccacaaagta atattccatt tttaggggtt ttttgagatg
      181 ttgttacctg cttttgttct ttctattttc ttgattttat gcaactcaca tttcatagtt
      241 catgtaactt gtttaaatga tgaagggtat actcttttga cttttaaaca atcaattaca
      301 caagaccctg atgggtcttt aaacaactgg aattattctg atgaaacccc ttgttcatgg
      361 aatggcattg catgtaaaga actaaaagtg atttctgtta gtataccaaa gaaaaaactt
      421 ttagggttta tatctcctgt tcttggatct cttcctgaac tcagacatgt taatttaaga
      481 aacaataagt tcatgggtag tttatctttt gagcttttta atgctgaaaa gcttcaaagt
      541 ttggtgcttt atggcaattc gttatctggg tcaatcccaa atgaaattag cagacttagc
      601 taccttcaaa ccctagattt gtcaagtaat ttctttaatg ggtcactacc catttcaatg
      661 attcaatgta agaggttaag aagtcttgat ctgagtcaaa acaatttcac tgggtcactc
      721 ccaaatgggt ttgggtccaa tttgggtttt cttgaaacac ttgacctttc gttcaattgg
      781 ttcatgggtt cgatacctga agatttgggg aacttgtctt ttttacaagg gactgttgat
      841 ttatcgcata atttgtttaa cggatcaatc ccacctagtt taggtaatct tcctgaaaag
      901 gtttatatcg atcttactta taacaacttg agtggcccga ttccacaaaa tggagctttg
      961 gttaaccgcg ggccaactgc attcattgga aatgctggtt tgtgtgggcc accactgaaa
     1021 aacctttgct ttccaaacga tgctagttca ccatcttcgt acccatatat acccaacaat
     1081 aacccatccg aaaccccaga aaaaggtcga aaagggttaa gtaaaagcgg tgttattgca
     1141 atcattatta gtgatgtcat cgggatatgt ctgattggat tggttctatc gtactgttat
     1201 acaagaattt gtccttgtgg taaacggaac cataggtatg aaaaaggagg tgttaaaaaa
     1261 agaaacgagt gtttgtgttt tagtaaagat gagtccgaaa cgttatccga gcatgtcgag
     1321 caatatgatc ttgtagcttt agatacccaa ttgggatttg atttagacga gcttttaaag
     1381 gcatcggctt ttgttttggg aaaaagtgga attgggattg tttataaggt tgtgcttgaa
     1441 gacggggtta ctttagccgt gagacgattg ggtgaaggcg gttctcaaag atttaaagaa
     1501 tttcaaaccg aagttgaagc aattggaaaa cttaaacatc cgaatattgt aactttgagg
     1561 gcttattatt ggtccgtcga tgagaagctg ctcatctatg attttgttcc aaatggcaac
     1621 ctaggcgctg ctattcacgg gaagcctggt gtgccatctt tcgtaccact ttcttggtct
     1681 gtacgtctga agataatgag aggaactgca aaaggtcttg tttatctgca cgagtttagc
     1741 cccaaaaaat acgtccacgg aggcctaaaa ccatcaaaca ttttgcttga cgtaaacatg
     1801 gaaccgcaaa tttctgattt tggccttggc cgtctagcta acatagctgg tggcggcaca
     1861 ccagtactac aatccacccg agtggggtcc gaagtcgcaa ctaccaccgc aaccgccacg
     1921 tcagcgtcag tttcgaatac tcatgcatct tattatcaag cacctgaagc ttttaaagtg
     1981 ttgaaaccgt cgcaaaaatg ggatgtttac tcttttggag tcgttttatt ggaaatgatt
     2041 actggaaaat cgcccgttgt gcaagtgggt ccggaagaaa tggatcttgt tcattggatt
     2101 caggtttgta ttgatgaaaa gaaaccgctt tcggatgttt tggatcctgg gttagttgca
     2161 gattcggata aagaagagga gattattgcg gttttaaaaa tcgcaatggg gtgcacccaa
     2221 attaacccag aaagaagacc atcaatgaga catgttgctg atgttttgga caggttgagt
     2281 caatactaaa tgaattgaga gttttgaaga ggattgaagt attgggttgg ttttggtaaa
     2341 ttggaaagtg gaagggtgtg tgatgtaaat ctgactaggg atgggagaat tattaattta
     2401 tgtttatgtt tatttctttg ttattgttct ttgttttggt ttcttcaagc atgacttgga
     2461 tttttaatta attaatgtaa atctcgaaa
//
LOCUS       XM_071830438            1460 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bifunctional
            dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose
            reductase (LOC139840212), mRNA.
ACCESSION   XM_071830438
VERSION     XM_071830438.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1460
                     /gene="LOC139840212"
                     /note="bifunctional dTDP-4-dehydrorhamnose
                     3,5-epimerase/dTDP-4-dehydrorhamnose reductase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840212"
     CDS             99..1004
                     /gene="LOC139840212"
                     /codon_start=1
                     /product="bifunctional dTDP-4-dehydrorhamnose
                     3,5-epimerase/dTDP-4-dehydrorhamnose reductase"
                     /protein_id="XP_071686539.1"
                     /db_xref="GeneID:139840212"
                     /translation="MVSQSNGSTAAPLKFLIYGRTGWIGGLLGKICESQNIQYTYGSG
                     RLESRDTLIADLATVNPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCR
                     EKGLILINYATGCIFEYDSGHQLGSGDGFKEEDIPNFTGSFYSKTKAMVEELLKNYEN
                     VCTLRVRMPISSDLTNPRNFITKISRYEKVVNIPNSMTILDELLPISIEMAKRNLTGI
                     YNFTNPGCVSHNEVLELYREYIDPTYTWKNFNLEEQAKVIVAPRSNNELDTTKLKTEF
                     PELLSIKESLVKFVFEPNRKTPVAA"
     misc_feature    <105..998
                     /gene="LOC139840212"
                     /note="probable rhamnose biosynthetic enzyme; Region:
                     PLN02260"
                     /db_xref="CDD:215146"
ORIGIN      
        1 atgacatttc tcttccacct tcttcactcc cctataaaca caatcactcc atcactctac
       61 ctctacacca ataatcaaca aacaacaaat aactaaaaat ggtttctcaa tccaacggtt
      121 caaccgctgc cccactaaag ttcctgatct acggtcgaac cggttggata ggcggtctac
      181 tcggcaaaat ctgtgaatct caaaacatcc aatacactta cggttccggc aggctcgagt
      241 cacgtgacac cctcatcgct gaccttgcta ccgttaaccc tactcacgtg ttcaacgctg
      301 ctggcgtcac cggccgacca aatgttgact ggtgtgagtc acataaagtt gagactattc
      361 gtactaatgt tgttggaact ttgactcttg ctgacgtgtg ccgtgaaaag gggttgattt
      421 tgattaatta tgctactggg tgtatttttg agtatgattc gggtcatcag ctcgggtcgg
      481 gtgatgggtt taaggaagag gatattccta attttactgg atctttttac tccaagacta
      541 aagctatggt agaggaactg ctcaaaaact acgaaaatgt atgcacatta cgtgtaagaa
      601 tgcccatctc atcagatctt acaaaccccc gaaacttcat cacaaaaatc tctcgttatg
      661 aaaaagtggt caacatccca aactcgatga ccattctcga cgaacttctt ccaatctcca
      721 tagaaatggc taaaagaaac ctaaccggga tctacaattt cactaacccc ggttgtgtta
      781 gccataacga agtattggag ttgtaccgtg agtacattga cccaacgtac acatggaaga
      841 acttcaatct tgaggagcaa gcaaaagtga ttgttgcacc aagaagcaac aacgagctcg
      901 atacaacaaa gttgaaaact gagtttcccg agctcttatc gatcaaagaa tcacttgtga
      961 agtttgtgtt tgagcctaac cgcaagaccc ccgttgcagc ttaatcttaa ggtttgaagt
     1021 tgcttttatt cgggctagtt ttgttgaaaa tgttattgtt gtatgttcaa actacatggg
     1081 gcaccattga agattttctt acgatattgc gtatttttcg ggttctattt tctggattgt
     1141 tttgatattg aataaacttg ttggaaatga tatagttttt tttttttttg tatgaatgaa
     1201 attattttct tatgttcatg tgaaatgata cttcagattt actcagcagt agttagctta
     1261 ttcagaatgg atctttgttg tgggctgttg atcaaactga ggcattccat catgctcaca
     1321 agtcacaaca atcatttggt actcatgaag tcataaataa tgtctatgta cttgtattgt
     1381 actctatgct ataaaatagt acctatatta tactactact attttatttt atttttaatt
     1441 tgtttcaatt aagaggaact
//
LOCUS       XM_071830439            1444 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquinone biosynthesis
            O-methyltransferase, mitochondrial-like (LOC139840213), mRNA.
ACCESSION   XM_071830439
VERSION     XM_071830439.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1444
                     /gene="LOC139840213"
                     /note="ubiquinone biosynthesis O-methyltransferase,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139840213"
     CDS             337..1242
                     /gene="LOC139840213"
                     /codon_start=1
                     /product="ubiquinone biosynthesis O-methyltransferase,
                     mitochondrial-like"
                     /protein_id="XP_071686540.1"
                     /db_xref="GeneID:139840213"
                     /translation="MISRSLYHLRKLSRTSVFTVHNSSANCVHEVVGASQPFIQNRSY
                     VASPQPSVSASTSSLNQTELDKFAAIADSWWDAEGPFKPLHVMNPTRLAFIRSTLCRH
                     FGKDPFSARPFEGLKFVDVGCGGGILSEPLARMGASVTGVDAVDKNIKIARLHADLDP
                     VASSIEYRCTTAENLVEEQKKFDAVIALEVIEHVADPAEFCKSLSALTVYHGATVIST
                     INRSMRAYATAIVAAEYILHWLPKGTHQWSSFLTPEELVLALQRASISVEEVAGFAYD
                     PLTRQWSLTDDIGVNFIAFGVKNSQ"
     misc_feature    337..1239
                     /gene="LOC139840213"
                     /note="hexaprenyldihydroxybenzoate methyltransferase;
                     Region: PLN02396"
                     /db_xref="CDD:178018"
     polyA_site      1444
                     /gene="LOC139840213"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccacacgtat acacgtccac cgcagcaaag tagagacgca cacaatttgc tctttcttcc
       61 ccatcatact ccctttccga ttcgccttct tccatatatt tttggttgtt taattggtgc
      121 aaaagcttcg tataatcgta tacatacata tcattaaatc agcaatcaag tttctcgttc
      181 gatcaattgg atttattatt tattactggt acatcatagt ttgcacacca cctgttcgat
      241 gaaatgtctg tatgacagtt tgtgtacaag atatttgaaa aactagctga aggtagagca
      301 gaaatacatt caattgctgc ttcattatct ggaaggatga tttcaagaag tttgtatcat
      361 ttacgtaaat tatcaagaac cagtgttttt actgttcata attcgagtgc caattgcgta
      421 catgaagttg ttggtgcttc acagccattt attcaaaata ggtcttacgt tgctagccct
      481 caaccttctg tttctgcttc tacgtcctct ttgaatcaaa ctgagctaga taaatttgca
      541 gctattgctg acagttggtg ggatgctgaa gggcctttta agccattgca tgtcatgaat
      601 cctacaaggc tggcttttat tcggtcaact ctttgcagac actttggtaa ggatcccttt
      661 tctgcaaggc cttttgaagg actaaagttt gtagatgttg gttgtggagg aggtatctta
      721 tctgagcctt tggctcgcat gggcgcttca gtaacaggtg ttgatgctgt ggacaaaaac
      781 atcaagattg cacgtcttca tgcggatttg gatccagtag cttcttcaat tgaatatcgt
      841 tgcacaactg ctgaaaattt ggttgaagag caaaagaaat ttgatgcggt tattgcttta
      901 gaggtaattg aacatgttgc agatcctgct gagttttgca aatctttgtc agctttaact
      961 gtgtatcatg gagcaactgt aatttcaaca attaaccgtt ctatgagagc gtatgcaact
     1021 gccattgtgg cggcagagta catcctacat tggcttccca agggtacaca tcaatggtcg
     1081 agtttcttaa ctcctgaaga actagtattg gcgctgcagc gagcttctat atctgttgaa
     1141 gaggtggctg gctttgcata cgatcctcta accagacagt ggtctcttac tgacgacatt
     1201 ggagtcaatt tcattgcttt tggtgttaaa aacagccaat aattacttgt tgagcttaaa
     1261 tgagccgttg gagtagtttt aaaatggtat agtatatcct tgtttatcgt ttagttgttt
     1321 ttttgtgtca ataagtaatc catctggctg cccaatgtta ctcactttgt tagcgtgttc
     1381 aattaactgg cggtctgttc tgttttcctt ttggaaattg taatgatatt tcgacctttc
     1441 actt
//
LOCUS       XR_011757275            1705 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840214), transcript variant X1, ncRNA.
ACCESSION   XR_011757275
VERSION     XR_011757275.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1705
                     /gene="LOC139840214"
                     /note="uncharacterized LOC139840214; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840214"
     ncRNA           1..1705
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840214"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840214"
ORIGIN      
        1 ccaccgctct cacaaagcga ctaccccaaa attcgtgctg gaacgaacga attttgcaag
       61 taacgtattg tttatttatc ataaccttcg tccaattggt tattttcgtt tccccctttt
      121 ttatgtttct gaatttttgt ttaaacaaat ttcattctat gacggtctaa ttagggttct
      181 ggcgaattta ctatgtcccg tgcttcagtg aggtgattgc cctattcttc agtatttgtg
      241 taatgatatt cctccatcat atcaatttac atattccctt tgctttcttt ttcaatgccc
      301 ctaaaaaatt ggggtttatg gtgatttttg cgatgtgtct tgcttcattg cggcgattgt
      361 cagtattcat gtaacgaact tgatatgtaa ttttttcatg ataaattttt tatatcttga
      421 tagtttcgta tgtttgagtt gcgattttag tatggtgata ctagagatac cgtaaatttg
      481 ggcccttttt attttccagg taagtagtta atcgacagcg gaataaaatt ggttgagaag
      541 gctaagggaa gaaaggaaga agtggggagt agagtacacc attaatcttc acaaacatct
      601 tcatgaatgg tacaaatgaa ggtaccaaat taagaaccat caagcaatta tgtaatcgag
      661 gtttagctaa tacatttgtc tagaatagtt caatgcctct tgaaaatgaa gttactgagg
      721 tcgacaaact catgtgtttc gttcatgaag ggaaaggtaa tatttatatt tatagccgct
      781 gaattgtatg ttgatttcga taacttgtat gaactgaact tttagtctat tcgataggcg
      841 catacgaatc tctggtacat tttcttacct ttttttttct tctcataaca ttgtgtgcct
      901 tccacttctg acaaaatatt cttggattca ccatacatga ctggaaatat taaccattcg
      961 atccacatca ttttagagct atagatttaa aataagtgat atatctgatg aagtttaaaa
     1021 ggtacaaaga tgggatgttt gagaggtcgg taacagtcaa aagggttagg catgttaacc
     1081 ggaaacattc atagctacat ttatgctacg ttaattttaa cccattacaa atgaacaaca
     1141 accaagatta agtttttcac aagtaagtgg agattaaggt ttgatgttat tgacttgaaa
     1201 ccgttagtag ctggtgattg tcgctgtttt aaccgttatt gttgtttccg ttaccttgac
     1261 agtttgcagg ttcgtttagc aaggactgcc aggttcacat cagtaacagc tacaaaacta
     1321 accattgtat gctataagaa agaaactagc gcgtatgtga acaaaaatta tccgttatag
     1381 ttcaacacga ggacctctac ctaaaataat ttaccgtctc cgagttgtag tgtaattcat
     1441 gtaaggtttt ttattaatga ggatgatcct tttgaaaccc tgacttacga acaacaatgt
     1501 agtattgttt tgtaaaccta ggttgtaagt ctgtaacaaa caaagacaga cattatcctt
     1561 tgcactccag tttccagtta tccttgtgaa atccttttga atgtatgcta caaatgttca
     1621 ccataaaccg ctgtaacgca cggacctgat atctagttac tactaaatat agattttgtc
     1681 aaatgaaatt gtataataat atttt
//
LOCUS       XR_011757276            1418 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840214), transcript variant X2, ncRNA.
ACCESSION   XR_011757276
VERSION     XR_011757276.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1418
                     /gene="LOC139840214"
                     /note="uncharacterized LOC139840214; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840214"
     ncRNA           1..1418
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840214"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840214"
ORIGIN      
        1 ccaccgctct cacaaagcga ctaccccaaa attcgtgctg gaacgaacga attttgcaag
       61 taacgtattg tttatttatc ataaccttcg tccaattggt tattttcgtt tccccctttt
      121 ttatgtttct gaatttttgt ttaaacaaat ttcattctat gacggtctaa ttagggttct
      181 ggcgaattta ctatgtcccg tgcttcagtg aggtaagtag ttaatcgaca gcggaataaa
      241 attggttgag aaggctaagg gaagaaagga agaagtgggg agtagagtac accattaatc
      301 ttcacaaaca tcttcatgaa tggtacaaat gaaggtacca aattaagaac catcaagcaa
      361 ttatgtaatc gaggtttagc taatacattt gtctagaata gttcaatgcc tcttgaaaat
      421 gaagttactg aggtcgacaa actcatgtgt ttcgttcatg aagggaaagg taatatttat
      481 atttatagcc gctgaattgt atgttgattt cgataacttg tatgaactga acttttagtc
      541 tattcgatag gcgcatacga atctctggta cattttctta cctttttttt tcttctcata
      601 acattgtgtg ccttccactt ctgacaaaat attcttggat tcaccataca tgactggaaa
      661 tattaaccat tcgatccaca tcattttaga gctatagatt taaaataagt gatatatctg
      721 atgaagttta aaaggtacaa agatgggatg tttgagaggt cggtaacagt caaaagggtt
      781 aggcatgtta accggaaaca ttcatagcta catttatgct acgttaattt taacccatta
      841 caaatgaaca acaaccaaga ttaagttttt cacaagtaag tggagattaa ggtttgatgt
      901 tattgacttg aaaccgttag tagctggtga ttgtcgctgt tttaaccgtt attgttgttt
      961 ccgttacctt gacagtttgc aggttcgttt agcaaggact gccaggttca catcagtaac
     1021 agctacaaaa ctaaccattg tatgctataa gaaagaaact agcgcgtatg tgaacaaaaa
     1081 ttatccgtta tagttcaaca cgaggacctc tacctaaaat aatttaccgt ctccgagttg
     1141 tagtgtaatt catgtaaggt tttttattaa tgaggatgat ccttttgaaa ccctgactta
     1201 cgaacaacaa tgtagtattg ttttgtaaac ctaggttgta agtctgtaac aaacaaagac
     1261 agacattatc ctttgcactc cagtttccag ttatccttgt gaaatccttt tgaatgtatg
     1321 ctacaaatgt tcaccataaa ccgctgtaac gcacggacct gatatctagt tactactaaa
     1381 tatagatttt gtcaaatgaa attgtataat aatatttt
//
LOCUS       XR_011757277            1445 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840214), transcript variant X3, ncRNA.
ACCESSION   XR_011757277
VERSION     XR_011757277.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1445
                     /gene="LOC139840214"
                     /note="uncharacterized LOC139840214; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840214"
     ncRNA           1..1445
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840214"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840214"
ORIGIN      
        1 ccaccgctct cacaaagcga ctaccccaaa attcgtgctg gaacgaacga attttgcaag
       61 taacgtattg tttatttatc ataaccttcg tccaattggt tattttcgtt tccccctttt
      121 ttatgtttct gaatttttgt ttaaacaaat ttcattctat gacggtctaa ttagggttct
      181 ggcgaattta ctatgtcccg tgcttcagtg aggtgattgc cctattcttc agtatttgtg
      241 taagtagtta atcgacagcg gaataaaatt ggttgagaag gctaagggaa gaaaggaaga
      301 agtggggagt agagtacacc attaatcttc acaaacatct tcatgaatgg tacaaatgaa
      361 ggtaccaaat taagaaccat caagcaatta tgtaatcgag gtttagctaa tacatttgtc
      421 tagaatagtt caatgcctct tgaaaatgaa gttactgagg tcgacaaact catgtgtttc
      481 gttcatgaag ggaaaggtaa tatttatatt tatagccgct gaattgtatg ttgatttcga
      541 taacttgtat gaactgaact tttagtctat tcgataggcg catacgaatc tctggtacat
      601 tttcttacct ttttttttct tctcataaca ttgtgtgcct tccacttctg acaaaatatt
      661 cttggattca ccatacatga ctggaaatat taaccattcg atccacatca ttttagagct
      721 atagatttaa aataagtgat atatctgatg aagtttaaaa ggtacaaaga tgggatgttt
      781 gagaggtcgg taacagtcaa aagggttagg catgttaacc ggaaacattc atagctacat
      841 ttatgctacg ttaattttaa cccattacaa atgaacaaca accaagatta agtttttcac
      901 aagtaagtgg agattaaggt ttgatgttat tgacttgaaa ccgttagtag ctggtgattg
      961 tcgctgtttt aaccgttatt gttgtttccg ttaccttgac agtttgcagg ttcgtttagc
     1021 aaggactgcc aggttcacat cagtaacagc tacaaaacta accattgtat gctataagaa
     1081 agaaactagc gcgtatgtga acaaaaatta tccgttatag ttcaacacga ggacctctac
     1141 ctaaaataat ttaccgtctc cgagttgtag tgtaattcat gtaaggtttt ttattaatga
     1201 ggatgatcct tttgaaaccc tgacttacga acaacaatgt agtattgttt tgtaaaccta
     1261 ggttgtaagt ctgtaacaaa caaagacaga cattatcctt tgcactccag tttccagtta
     1321 tccttgtgaa atccttttga atgtatgcta caaatgttca ccataaaccg ctgtaacgca
     1381 cggacctgat atctagttac tactaaatat agattttgtc aaatgaaatt gtataataat
     1441 atttt
//
LOCUS       XR_011757278             630 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840215), ncRNA.
ACCESSION   XR_011757278
VERSION     XR_011757278.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..630
                     /gene="LOC139840215"
                     /note="uncharacterized LOC139840215; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840215"
     ncRNA           1..630
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840215"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840215"
ORIGIN      
        1 aaaaaaaaaa aaaaaatata aggttgtgtc tacggggatg aagaagtttc ttatgggtcc
       61 ttggagggtc cttagattga tggagttatg tcagtcgtac tcttatttac ggtgtgttac
      121 aagttactat tcggatgtga aggtttaaga atttcttcga ggagtgttga ctaaccgttg
      181 ttgggaaggt ggtcaaattt tttgtcaccg gagaaggaag ctcctgttca gaacagttgc
      241 caagtcagaa atactttttg gataacatca gagcgtggaa tcaaatgttt agtatgacgt
      301 tgtttggcgc gcgtgtagac gaatctatta gtgttcgaca tgagtattca aggtaaatac
      361 acttagaaca ctaacctttc ttcttagaaa gtagtcattt tatcattcct gttatgttgt
      421 attgaccaga acttggcatg gactaggata ttttttttta gaaaggataa gatgcaatag
      481 gtcaattgat gcgtttgcgt aagggagtca actgatctag gggatgatat ggaactttat
      541 gggactgtga agcctattct tactactata gatagatgat cttgaattta ttatttaaaa
      601 caacatatat gctctcaaat ttattcagtg
//
LOCUS       XM_071830441            2867 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 3-like (LOC139840216), transcript variant X1, mRNA.
ACCESSION   XM_071830441
VERSION     XM_071830441.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2867
                     /gene="LOC139840216"
                     /note="protein FAR1-RELATED SEQUENCE 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840216"
     CDS             252..2792
                     /gene="LOC139840216"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 3-like"
                     /protein_id="XP_071686542.1"
                     /db_xref="GeneID:139840216"
                     /translation="MDVGLMSVEEETMGQHSVAFDRFDDTNGGPEPSGLSTYQENNMN
                     TDPHVGLEFAYIEAANTFYNEYAKRVGFTTCVNQIIRSTCDATPPVCEFLCTASGDGC
                     NAMLRIKSKSQNSWVVTKFIKEHNHPITNVRKLNHRRQKRQHSGTMLGSVPNGVMYLS
                     KCPSMESNRAVQIVDSIINSVRQTSIKRSLGKDAQNLLDYFRKMQAENPGFYYAIQLD
                     DDNRMANVFWADARSRTAYTHFGDAVIFDTMYRVKNYKVPFAPFTGINHHGQTILFGC
                     ALLLDESECTFTWLFKTFLAAMGDRGPVSIVTDPEKSIQAAVANVFPGARHCINKWQV
                     LREGNERLAHVCHMHPNFQTELYNCINLTDTIDEFESCWNFIIDKYDLRSNDWLQSIF
                     DVRQQWVPAYFRDTFFAFNQSFESSFFDGYVNEHTTVPSFFRQYERALENSFEKEIES
                     DFDTICTTPVLRTPSPMEKQAANSYTKTIFSKFQEELVETFAYTANRIDGDGSVSTFR
                     VAKYEDNQKAYIVSLSIAELRVNCSCQMFECSGVLCRHILTVFTVSNVLTLPSHYILK
                     RWTRDAKCDYSIELYVKGHEPESLSIRYNQLIRQAIKFAEEGCVTRDTFSVAMGFLRE
                     GGKKVAAAKTNVASFTPRSSQVNVVGYDNRKTGSTVPDVTPLLWPRQDEVTRRFNLND
                     GGLLGQPVNDLNLPRMAPVSLRRDDGHHDNMATLPCLKSMTWAMENRALPPANRVAVI
                     NLKLQDYRRTPPSESEVKFQLSTVTLEPMLRSMAHINEQLSAPANRLAVINLKLQDTD
                     TTSGESEVKFQVSRDTLGAMLRSMAYIREQLSNAAESPSEMASKRPRK"
     misc_feature    252..>2123
                     /gene="LOC139840216"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 gcattcctct tcaaacccga accaccctta gatcttaatc caacggtcat cgtctcgcgt
       61 ccactttatc atcacaaatc tacgcgacac ctaacatatt ctccactctc gccggtgaag
      121 caattaacgg aaccctaaca accatcacga tcatctccga ttttctctag tgttaactga
      181 ggagcaaatt cattaatgaa atttaatagc tgaaaggatg tgaaaaatgt tcatacgaag
      241 tgtgcttaat tatggatgtc ggattaatga gtgttgaaga ggagaccatg ggtcaacata
      301 gtgttgcctt tgatcgattt gatgatacaa acggtgggcc cgaaccctct ggattatcca
      361 cgtaccaaga gaataatatg aatacggacc cacatgttgg tttagagttt gcttatatag
      421 aagctgccaa tactttctac aatgagtatg ctaaacgggt cgggttcaca acatgtgtta
      481 atcaaattat ccgatccaca tgtgatgcaa cccctccagt gtgtgaattt ttatgtacag
      541 catcaggtga tggctgtaac gctatgctta gaatcaagtc aaaaagtcaa aatagctggg
      601 ttgtaacaaa atttataaag gaacataatc acccaatcac aaatgttcgt aagttgaatc
      661 accgacgtca aaaacgacag cattctggta ctatgttagg ttctgtccct aatggtgtta
      721 tgtatctgtc taaatgtcct tctatggaat caaatcgtgc agtacaaatt gttgattcta
      781 taattaattc tgttaggcaa acaagtatca aaaggtcatt aggaaaagat gctcagaatc
      841 ttctagatta cttcagaaaa atgcaagctg agaacccggg tttttactac gctatacaac
      901 tagacgatga taaccgtatg gctaatgtgt tttgggccga tgctaggtct agaaccgctt
      961 atacccattt tggtgatgcg gttatatttg acacaatgta ccgagtgaaa aactataaag
     1021 tgccatttgc tccatttact gggatcaacc atcatggtca aacaattttg ttcggttgtg
     1081 cattgcttct agatgaatcc gaatgtacat ttacatggct ttttaagacg tttcttgctg
     1141 ccatgggtga tcgtggtccg gtatctatag tcaccgatcc cgaaaaatcg atacaagctg
     1201 cagttgcaaa tgttttccct ggggcccgcc actgtatcaa caagtggcaa gtacttagag
     1261 aaggtaatga aaggctggca catgtttgtc acatgcatcc taattttcag actgagttat
     1321 acaattgcat taacttgaca gatacaattg atgagtttga atcctgttgg aactttatta
     1381 tcgataaata tgatcttaga agtaatgatt ggctgcagtc aatattcgat gtgcgacaac
     1441 agtgggtccc ggcatatttt cgcgacacct tttttgcttt caatcagagt tttgaaagtt
     1501 cattttttga tggttatgta aacgaacaca ctactgttcc ttcgttcttt agacagtatg
     1561 aacgagcttt ggaaaactca tttgaaaagg aaatagaatc ggatttcgat actatttgca
     1621 ccacaccagt attgcgaaca ccgtcaccga tggagaaaca agcagcaaat tcatatacaa
     1681 aaacaatatt ctcaaaattt caagaagagt tagttgaaac attcgcgtac actgcaaata
     1741 ggatcgatgg tgatggttct gtaagcacat ttagggttgc aaaatatgaa gataaccaga
     1801 aagcgtatat cgtttcttta agtattgcag aattaagagt aaattgcagt tgccagatgt
     1861 ttgagtgttc aggtgttctt tgcagacata ttttaactgt ttttacagtg tcaaacgttc
     1921 tcacattgcc atctcattac attcttaaaa gatggactag agatgcaaaa tgtgactatt
     1981 cgatagaatt atatgtaaaa gggcatgaac ctgagtcgtt aagtattcgt tacaaccaat
     2041 taattcgtca agctatcaaa tttgctgagg aagggtgtgt tactcgagat acgtttagtg
     2101 tagcaatggg ttttttaaga gaaggtggga aaaaggtggc tgctgcaaag acaaatgtgg
     2161 ctagttttac accgcgtagt tcacaggtta atgtggttgg ttatgataac cgtaagactg
     2221 ggtctactgt acctgatgta acacctttgt tgtggccccg ccaagatgaa gtaacaagac
     2281 ggtttaatct taatgatggt ggacttttgg gtcaacctgt taatgattta aatctccctc
     2341 gaatggctcc cgtatctctt cgacgtgatg atggccatca tgacaacatg gcaactcttc
     2401 cttgtcttaa gtcaatgaca tgggcaatgg aaaacagagc tttgcctcca gcaaacaggg
     2461 tagctgtaat aaacctcaag ttgcaagatt atagaaggac cccaccaagt gaatctgagg
     2521 ttaagtttca gctatctaca gttactctag agccaatgtt gaggtcaatg gctcacatca
     2581 atgaacagct ctcagcccct gctaataggc ttgctgtcat taatttaaag cttcaagata
     2641 cagataccac atcaggagaa tcggaggtga agtttcaggt atccagagac acattagggg
     2701 ctatgttgag atcaatggct tatatccgtg aacaactttc aaatgcagct gaatcaccat
     2761 cagaaatggc ttcaaagaga ccaaggaaat aaagaacaat cctcttttta gttctataac
     2821 caacccaaaa taccaacaac aaatttaagt ttcttttttt tgttatt
//
LOCUS       XM_071830442            2761 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 3-like (LOC139840216), transcript variant X2, mRNA.
ACCESSION   XM_071830442
VERSION     XM_071830442.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2761
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2761
                     /gene="LOC139840216"
                     /note="protein FAR1-RELATED SEQUENCE 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840216"
     CDS             146..2686
                     /gene="LOC139840216"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 3-like"
                     /protein_id="XP_071686543.1"
                     /db_xref="GeneID:139840216"
                     /translation="MDVGLMSVEEETMGQHSVAFDRFDDTNGGPEPSGLSTYQENNMN
                     TDPHVGLEFAYIEAANTFYNEYAKRVGFTTCVNQIIRSTCDATPPVCEFLCTASGDGC
                     NAMLRIKSKSQNSWVVTKFIKEHNHPITNVRKLNHRRQKRQHSGTMLGSVPNGVMYLS
                     KCPSMESNRAVQIVDSIINSVRQTSIKRSLGKDAQNLLDYFRKMQAENPGFYYAIQLD
                     DDNRMANVFWADARSRTAYTHFGDAVIFDTMYRVKNYKVPFAPFTGINHHGQTILFGC
                     ALLLDESECTFTWLFKTFLAAMGDRGPVSIVTDPEKSIQAAVANVFPGARHCINKWQV
                     LREGNERLAHVCHMHPNFQTELYNCINLTDTIDEFESCWNFIIDKYDLRSNDWLQSIF
                     DVRQQWVPAYFRDTFFAFNQSFESSFFDGYVNEHTTVPSFFRQYERALENSFEKEIES
                     DFDTICTTPVLRTPSPMEKQAANSYTKTIFSKFQEELVETFAYTANRIDGDGSVSTFR
                     VAKYEDNQKAYIVSLSIAELRVNCSCQMFECSGVLCRHILTVFTVSNVLTLPSHYILK
                     RWTRDAKCDYSIELYVKGHEPESLSIRYNQLIRQAIKFAEEGCVTRDTFSVAMGFLRE
                     GGKKVAAAKTNVASFTPRSSQVNVVGYDNRKTGSTVPDVTPLLWPRQDEVTRRFNLND
                     GGLLGQPVNDLNLPRMAPVSLRRDDGHHDNMATLPCLKSMTWAMENRALPPANRVAVI
                     NLKLQDYRRTPPSESEVKFQLSTVTLEPMLRSMAHINEQLSAPANRLAVINLKLQDTD
                     TTSGESEVKFQVSRDTLGAMLRSMAYIREQLSNAAESPSEMASKRPRK"
     misc_feature    146..>2017
                     /gene="LOC139840216"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 taacaaccat cacgatcatc tgtaagctac ttttccccgt tcaattagag ccgattttct
       61 ctagtgttaa ctgaggagca aattcattaa tgaaatttaa tagctgaaag gatgtgaaaa
      121 atgttcatac gaagtgtgct taattatgga tgtcggatta atgagtgttg aagaggagac
      181 catgggtcaa catagtgttg cctttgatcg atttgatgat acaaacggtg ggcccgaacc
      241 ctctggatta tccacgtacc aagagaataa tatgaatacg gacccacatg ttggtttaga
      301 gtttgcttat atagaagctg ccaatacttt ctacaatgag tatgctaaac gggtcgggtt
      361 cacaacatgt gttaatcaaa ttatccgatc cacatgtgat gcaacccctc cagtgtgtga
      421 atttttatgt acagcatcag gtgatggctg taacgctatg cttagaatca agtcaaaaag
      481 tcaaaatagc tgggttgtaa caaaatttat aaaggaacat aatcacccaa tcacaaatgt
      541 tcgtaagttg aatcaccgac gtcaaaaacg acagcattct ggtactatgt taggttctgt
      601 ccctaatggt gttatgtatc tgtctaaatg tccttctatg gaatcaaatc gtgcagtaca
      661 aattgttgat tctataatta attctgttag gcaaacaagt atcaaaaggt cattaggaaa
      721 agatgctcag aatcttctag attacttcag aaaaatgcaa gctgagaacc cgggttttta
      781 ctacgctata caactagacg atgataaccg tatggctaat gtgttttggg ccgatgctag
      841 gtctagaacc gcttataccc attttggtga tgcggttata tttgacacaa tgtaccgagt
      901 gaaaaactat aaagtgccat ttgctccatt tactgggatc aaccatcatg gtcaaacaat
      961 tttgttcggt tgtgcattgc ttctagatga atccgaatgt acatttacat ggctttttaa
     1021 gacgtttctt gctgccatgg gtgatcgtgg tccggtatct atagtcaccg atcccgaaaa
     1081 atcgatacaa gctgcagttg caaatgtttt ccctggggcc cgccactgta tcaacaagtg
     1141 gcaagtactt agagaaggta atgaaaggct ggcacatgtt tgtcacatgc atcctaattt
     1201 tcagactgag ttatacaatt gcattaactt gacagataca attgatgagt ttgaatcctg
     1261 ttggaacttt attatcgata aatatgatct tagaagtaat gattggctgc agtcaatatt
     1321 cgatgtgcga caacagtggg tcccggcata ttttcgcgac accttttttg ctttcaatca
     1381 gagttttgaa agttcatttt ttgatggtta tgtaaacgaa cacactactg ttccttcgtt
     1441 ctttagacag tatgaacgag ctttggaaaa ctcatttgaa aaggaaatag aatcggattt
     1501 cgatactatt tgcaccacac cagtattgcg aacaccgtca ccgatggaga aacaagcagc
     1561 aaattcatat acaaaaacaa tattctcaaa atttcaagaa gagttagttg aaacattcgc
     1621 gtacactgca aataggatcg atggtgatgg ttctgtaagc acatttaggg ttgcaaaata
     1681 tgaagataac cagaaagcgt atatcgtttc tttaagtatt gcagaattaa gagtaaattg
     1741 cagttgccag atgtttgagt gttcaggtgt tctttgcaga catattttaa ctgtttttac
     1801 agtgtcaaac gttctcacat tgccatctca ttacattctt aaaagatgga ctagagatgc
     1861 aaaatgtgac tattcgatag aattatatgt aaaagggcat gaacctgagt cgttaagtat
     1921 tcgttacaac caattaattc gtcaagctat caaatttgct gaggaagggt gtgttactcg
     1981 agatacgttt agtgtagcaa tgggtttttt aagagaaggt gggaaaaagg tggctgctgc
     2041 aaagacaaat gtggctagtt ttacaccgcg tagttcacag gttaatgtgg ttggttatga
     2101 taaccgtaag actgggtcta ctgtacctga tgtaacacct ttgttgtggc cccgccaaga
     2161 tgaagtaaca agacggttta atcttaatga tggtggactt ttgggtcaac ctgttaatga
     2221 tttaaatctc cctcgaatgg ctcccgtatc tcttcgacgt gatgatggcc atcatgacaa
     2281 catggcaact cttccttgtc ttaagtcaat gacatgggca atggaaaaca gagctttgcc
     2341 tccagcaaac agggtagctg taataaacct caagttgcaa gattatagaa ggaccccacc
     2401 aagtgaatct gaggttaagt ttcagctatc tacagttact ctagagccaa tgttgaggtc
     2461 aatggctcac atcaatgaac agctctcagc ccctgctaat aggcttgctg tcattaattt
     2521 aaagcttcaa gatacagata ccacatcagg agaatcggag gtgaagtttc aggtatccag
     2581 agacacatta ggggctatgt tgagatcaat ggcttatatc cgtgaacaac tttcaaatgc
     2641 agctgaatca ccatcagaaa tggcttcaaa gagaccaagg aaataaagaa caatcctctt
     2701 tttagttcta taaccaaccc aaaataccaa caacaaattt aagtttcttt tttttgttat
     2761 t
//
LOCUS       XR_011757279            1539 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840217), transcript variant X1, ncRNA.
ACCESSION   XR_011757279
VERSION     XR_011757279.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1539
                     /gene="LOC139840217"
                     /note="uncharacterized LOC139840217; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840217"
     ncRNA           1..1539
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840217"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840217"
ORIGIN      
        1 ttcacatcta aattagaata atcatcattc aaattttgat ttattttaag ctttgcttac
       61 acgatgatta acaactgcat tatttttact gtttacataa ccatttcaac ctttcttatt
      121 ctgttacaat tgttcatatg gtcggatggt tgatatatgg ttagattatt gtttagatag
      181 atcaagttga taatgatata aaatgtggat atgtgattta cacaaaaatt gaattcaatg
      241 ttgggtgagt cattagcttt gtggtactct ttttcttctt ccgttcttat gattaagttg
      301 ttcaaaactc ccctatatgt cacttaaacc tatttttaag taattagtct atgtttattt
      361 ggtggttgtg gatcttgata gcataacctg atcaaactaa ttaatgaagc atatgcttta
      421 ttcgcctaat atatgaaaat tataggagta gtttcgctcc ttgtccgata tcacttttac
      481 taatgttctg tatgttcttt tttgctgagg atgtgaacag gtagaagggt ggaggtattt
      541 ctgccttatt tttttggcct ttttacttgt aatgagtgct tcatgttagt atttgattcg
      601 tatttggatt taaaaataga taattgtgtc atatcacaag tattccactg gttgtactaa
      661 taagtaagtt tcttatcgtg ggccgctttt tatgttacta cgcactggcc ggttggtctc
      721 caatcaaatt tttgtttcga attattatct tgcagatacc accagacatc cttgcttcaa
      781 gttatgcatt gcaataggtg gtctgtttta gtttgcagat gccatctaca acaatcaaat
      841 tcttatgatg tgatagaata tagagttgaa gttgatttta gacatttata ttgttctcta
      901 gctacaccta aatcgtgatt gcgccaagtt catgaatagt ccgagagaaa tagaattaca
      961 tgtttgtgtg gatttgatgt gtggtgacaa tggcaagaaa ctacaagtag atgtgtaagg
     1021 ccatgggtgg aatcatcaag ttatggtgtt gtctaaaaaa tgccgatttg tgttatgctt
     1081 tcattgtgtt cgataaaatg ccacattcag acgctttcat ttatgacact atttttagag
     1141 ttttgtgcag tttcaacagg aatgccacat tcatttatat ctaaagaaat cgtcttttta
     1201 atgaagagat ttcaatggga atgtgcgtga atgaatcatg gattgatggt gacttcattg
     1261 gaaatggtct acctacttca tttttaagaa gttactatga aggtattatt tgtcaagatg
     1321 ttagaaaaaa cgatatgtta tgtacctatt gtaacttagt gtaagttact acaaaatagg
     1381 taaggaatta aaccgattta cttagttata tatgttttgg acgaagaact tagaacgatt
     1441 taatttttag tttatttaga aataagaact ttgatttgca tataaattta tgttttgtaa
     1501 gagcctactg attacaaaac tttatgcctt caagttttc
//
LOCUS       XR_011757280            1282 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840217), transcript variant X2, ncRNA.
ACCESSION   XR_011757280
VERSION     XR_011757280.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1282
                     /gene="LOC139840217"
                     /note="uncharacterized LOC139840217; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840217"
     ncRNA           1..1282
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840217"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840217"
ORIGIN      
        1 tccctttcat tttcttctcg attaatattt gttgttaggg tttcttcagc ttaacaattc
       61 tacttaacga gaatccttct tctccctaaa tctcaattct caactcgaat ttgatcaaca
      121 attgaagatt tgggtctaat tgcatcaaca aagacatgat caattgaagc tttgatactt
      181 tgatctacag atttgaccgt gattggaaga aaattgaagc ttttataggc tcaaagacta
      241 tcatccagga tgtgaacagg tagaagggtg gaggtatttc tgccttattt ttttggcctt
      301 tttacttgta atgagtgctt catgttagta tttgattcgt atttggattt aaaaatagat
      361 aattgtgtca tatcacaagt attccactgg ttgtactaat aagtaagttt cttatcgtgg
      421 gccgcttttt atgttactac gcactggccg gttggtctcc aatcaaattt ttgtttcgaa
      481 ttattatctt gcagatacca ccagacatcc ttgcttcaag ttatgcattg caataggtgg
      541 tctgttttag tttgcagatg ccatctacaa caatcaaatt cttatgatgt gatagaatat
      601 agagttgaag ttgattttag acatttatat tgttctctag ctacacctaa atcgtgattg
      661 cgccaagttc atgaatagtc cgagagaaat agaattacat gtttgtgtgg atttgatgtg
      721 tggtgacaat ggcaagaaac tacaagtaga tgtgtaaggc catgggtgga atcatcaagt
      781 tatggtgttg tctaaaaaat gccgatttgt gttatgcttt cattgtgttc gataaaatgc
      841 cacattcaga cgctttcatt tatgacacta tttttagagt tttgtgcagt ttcaacagga
      901 atgccacatt catttatatc taaagaaatc gtctttttaa tgaagagatt tcaatgggaa
      961 tgtgcgtgaa tgaatcatgg attgatggtg acttcattgg aaatggtcta cctacttcat
     1021 ttttaagaag ttactatgaa ggtattattt gtcaagatgt tagaaaaaac gatatgttat
     1081 gtacctattg taacttagtg taagttacta caaaataggt aaggaattaa accgatttac
     1141 ttagttatat atgttttgga cgaagaactt agaacgattt aatttttagt ttatttagaa
     1201 ataagaactt tgatttgcat ataaatttat gttttgtaag agcctactga ttacaaaact
     1261 ttatgccttc aagttttcta tt
//
LOCUS       XR_011757281            1570 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840217), transcript variant X3, ncRNA.
ACCESSION   XR_011757281
VERSION     XR_011757281.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1570
                     /gene="LOC139840217"
                     /note="uncharacterized LOC139840217; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840217"
     ncRNA           1..1570
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840217"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840217"
ORIGIN      
        1 tttgtttcac atctaaatta gaataatcat cattcaaatt ttgatttatt ttaagctttg
       61 cttacacgat gattaacaac tgcattattt ttactgttta cataaccatt tcaacctttc
      121 ttattctgtt acaattgttc atatggtcgg atggttgata tatggttaga ttattgttta
      181 gatagatcaa gttgataatg atataaaatg tggatatgtg atttacacaa aaattgaatt
      241 caatgttggg tgagtcatta gctttgtggt actctttttc ttcttccgtt cttatgatta
      301 agttgttcaa aactccccta tatgtcactt aaacctattt ttaagtaatt agtctatgtt
      361 tatttggtgg ttgtggatct tgatagcata acctgatcaa actaattaat gaagcatatg
      421 ctttattcgc ctaatatatg aaaattatag gagtagtttc gctccttgtc cgatatcact
      481 tttactaatg ttctgtatgt tcttttttgc tgaggatgtg aacaggtaga agggtggagg
      541 tatttctgcc ttattttttt ggccttttta cttgtaatga gtgcttcatg ttagtatttg
      601 attcgtattt ggatttaaaa atagataatt gtgtcatatc acaagtattc cactggttgt
      661 actaataagt aagtttctta tcgtgggccg ctttttatgt tactacgcac tggccggttg
      721 gtctccaatc aaatttttgt ttcgaattat tatcttgcag ataccaccag acatccttgc
      781 ttcaagttat gcattgcaat aggtggtctg ttttagtttg cagatgccat ctacaacaat
      841 caaattctta tgatgtgata gaatatagag ttgaagttga ttttagacat ttatattgtt
      901 ctctagctac acctaaatcg tgattgcgcc aagttcatga atagtccgag agaaatagaa
      961 ttacatgttt gtgtggattt gatgtgtggt gacaatggca agaaactaca agtagatgtg
     1021 taaggccatg ggtggaatca tcaagttatg gtgttgtcta aaaaatgccg atttgtgtta
     1081 tgctttcatt gtgttcgata aaatgccaca ttcagacgct ttcatttatg acactatttt
     1141 tagagttttg tgcagtttca acaggaatgc cacattcatt tatatctaaa gaaatcgtct
     1201 ttttaatgaa gagatttcaa tgggaatgtg cgtgaatgaa tcatggattg atggtgactt
     1261 cattggaaat ggtctaccta cttcattttt aagaagttac tatgaagtgg atggaatgtg
     1321 ttacgatgta ccatgtgcag aagcacaagg acagtcaagt accaggtgaa aagctacacg
     1381 ttaagaagca taaagattag tgttgtggag agatttcaga gtcgcttgtt cggtggttgg
     1441 ataactttct cacgggcgtc gattgaactc ctaacaacta caagtttcaa tgctggatta
     1501 gaaactcagt gatgagttaa tttctcaact tcgtgctgat caccatatag aaaacagcaa
     1561 tgcagagatc
//
LOCUS       XR_011757282            1271 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840217), transcript variant X4, ncRNA.
ACCESSION   XR_011757282
VERSION     XR_011757282.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1271
                     /gene="LOC139840217"
                     /note="uncharacterized LOC139840217; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840217"
     ncRNA           1..1271
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840217"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840217"
ORIGIN      
        1 tccctttcat tttcttctcg attaatattt gttgttaggg tttcttcagc ttaacaattc
       61 tacttaacga gaatccttct tctccctaaa tctcaattct caactcgaat ttgatcaaca
      121 attgaagatt tgggtctaat tgcatcaaca aagacatgat caattgaagc tttgatactt
      181 tgatctacag atttgaccgt gattggaaga aaattgaagc ttttataggc tcaaagacta
      241 tcatccaggt agaagggtgg aggtatttct gccttatttt tttggccttt ttacttgtaa
      301 tgagtgcttc atgttagtat ttgattcgta tttggattta aaaatagata attgtgtcat
      361 atcacaagta ttccactggt tgtactaata agtaagtttc ttatcgtggg ccgcttttta
      421 tgttactacg cactggccgg ttggtctcca atcaaatttt tgtttcgaat tattatcttg
      481 cagataccac cagacatcct tgcttcaagt tatgcattgc aataggtggt ctgttttagt
      541 ttgcagatgc catctacaac aatcaaattc ttatgatgtg atagaatata gagttgaagt
      601 tgattttaga catttatatt gttctctagc tacacctaaa tcgtgattgc gccaagttca
      661 tgaatagtcc gagagaaata gaattacatg tttgtgtgga tttgatgtgt ggtgacaatg
      721 gcaagaaact acaagtagat gtgtaaggcc atgggtggaa tcatcaagtt atggtgttgt
      781 ctaaaaaatg ccgatttgtg ttatgctttc attgtgttcg ataaaatgcc acattcagac
      841 gctttcattt atgacactat ttttagagtt ttgtgcagtt tcaacaggaa tgccacattc
      901 atttatatct aaagaaatcg tctttttaat gaagagattt caatgggaat gtgcgtgaat
      961 gaatcatgga ttgatggtga cttcattgga aatggtctac ctacttcatt tttaagaagt
     1021 tactatgaag gtattatttg tcaagatgtt agaaaaaacg atatgttatg tacctattgt
     1081 aacttagtgt aagttactac aaaataggta aggaattaaa ccgatttact tagttatata
     1141 tgttttggac gaagaactta gaacgattta atttttagtt tatttagaaa taagaacttt
     1201 gatttgcata taaatttatg ttttgtaaga gcctactgat tacaaaactt tatgccttca
     1261 agttttctat t
//
LOCUS       XM_071830443             897 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein RER1A-like
            (LOC139840218), mRNA.
ACCESSION   XM_071830443
VERSION     XM_071830443.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..897
                     /gene="LOC139840218"
                     /note="protein RER1A-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139840218"
     CDS             77..676
                     /gene="LOC139840218"
                     /codon_start=1
                     /product="protein RER1A-like"
                     /protein_id="XP_071686544.1"
                     /db_xref="GeneID:139840218"
                     /translation="MDVGGTTSNHLESTDLKSTSISEYTHTISRRYQHLLDKSTPHVL
                     HRWIGFAIVFIIYALRVYFVQGFYVVTYGLGIYILQLFLAFLSPQVDPELNDGPSLPT
                     RGSEEFRPFVRRLPEFKFWYSLTRAFCIAFTLTFFSMFDVPVFWPILLFYWIVLFVST
                     MKRQIMHMIKYRYVPFSFGKRKYTGKKAAAVDDASNGRP"
     misc_feature    143..625
                     /gene="LOC139840218"
                     /note="Rer1 family; Region: Rer1; pfam03248"
                     /db_xref="CDD:460860"
ORIGIN      
        1 tttccgatct acgagtacaa tctgtaccca tctctccaga atccatatca tttcattaaa
       61 cacccaaaac ccaaaaatgg atgtcggtgg tactaccagt aatcatcttg aatccacaga
      121 tctcaaatcc acatcaatct ccgaatacac tcacacaatt tccaggagat accaacatct
      181 tcttgacaag tcaacaccac acgttctcca ccgttggatc ggtttcgcta ttgtcttcat
      241 aatttatgca cttcgtgttt actttgttca aggattttat gttgttactt atggtcttgg
      301 tatttatata ttgcaactgt ttcttgcatt tttgtcacct caagttgatc ctgaactcaa
      361 tgatggtcct tctttgccta ctcgtggatc tgaagagttt cgcccctttg ttcgacgtct
      421 tcctgagttt aaattctggt attcgcttac aagagccttc tgtatcgctt ttacgctcac
      481 atttttcagc atgtttgacg tgcctgtatt ttggccaatt ttgttgttct attggatcgt
      541 actatttgtt tcaacaatga aaaggcagat aatgcacatg attaaatata gatatgttcc
      601 gttctccttt ggcaaacgga aatacacggg aaagaaagca gctgcagtcg atgatgcatc
      661 caatggcaga ccatgaagat tttggtgagt taacttgtaa tattcgacta gctgaaatta
      721 aacaacaaag gatctgtttt aggtgacgag atattgtgaa atctggtcgg cccgtagatg
      781 attgaaaggt gtattatttg ttgtaggcta attttcctta taatatcttt tatgtgttcg
      841 aaattttgac catgggacac tttattctat ttgatcattt aaaattaaaa ataaatt
//
LOCUS       XM_071830444             838 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein eS12-like (LOC139840219), mRNA.
ACCESSION   XM_071830444
VERSION     XM_071830444.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..838
                     /gene="LOC139840219"
                     /note="small ribosomal subunit protein eS12-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139840219"
     CDS             91..519
                     /gene="LOC139840219"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS12-like"
                     /protein_id="XP_071686545.1"
                     /db_xref="GeneID:139840219"
                     /translation="MAAEEGVVPVEVAAPAPALGEPMDIMTALQLVLRKSLAHGGLVR
                     GLHGAAKVIEKHAAQLCVLAEDCNQPDYQKLVKALCADHNVSLVTVPSAKTLGEWAGL
                     CKIDSEGKARKVVGCSCLVVKDYGEESEGLHIVQEYVKSH"
     misc_feature    169..456
                     /gene="LOC139840219"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     Region: Ribosomal_L7Ae; pfam01248"
                     /db_xref="CDD:426153"
     polyA_site      838
                     /gene="LOC139840219"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctgaattcg cagccgacct gtttgtgcct taatttaatt ctgtatcaac gacaccagtt
       61 tgactcgaag attatatacc atcagaaaac atggcagctg aagaaggtgt tgttccagtt
      121 gaggtggctg ctccagcccc tgctcttggt gagcccatgg acatcatgac cgctttgcaa
      181 cttgtgttga ggaaatcact tgctcatggt ggtcttgtac gtgggctcca tggggctgca
      241 aaagtgatcg agaagcatgc tgctcaactt tgtgtattgg ctgaagattg taaccagcct
      301 gattatcaaa agttggtcaa agcactatgt gctgaccata atgttagctt ggttaccgtt
      361 cccagtgcca agactcttgg cgagtgggct ggtttgtgca agattgactc cgaaggaaaa
      421 gcaagaaagg ttgttggttg ttcatgcctt gttgtgaagg attatggcga ggaaagtgaa
      481 gggcttcaca tcgtccagga gtatgttaaa tctcactaaa tatggttgtg gatcaaaata
      541 ctctcgttga gacctcatta ttgtctgttt ttaaattttg gtaagggaaa ctttccctat
      601 aaattattag attgtacgcc atagtactct tttcaaagtg gactagattt gtgttattca
      661 gtcttttgta ccttttatgt gttggtgttt tttgattatg cgtcatcgag tatatttaca
      721 actctagtgg tttggtaatt cgctgaagca ccacgatgga aacaggtgtc ttctcattaa
      781 tcttgtctgt ttttgaactt ttggggattt tttaagaatg agctttaaat ctgctgaa
//
LOCUS       XM_071830445            2016 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840220), transcript variant X1, mRNA.
ACCESSION   XM_071830445
VERSION     XM_071830445.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2016
                     /gene="LOC139840220"
                     /note="uncharacterized LOC139840220; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840220"
     CDS             106..1812
                     /gene="LOC139840220"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686546.1"
                     /db_xref="GeneID:139840220"
                     /translation="MDIAYIMRNRKTSDVAKDKAILTVDDLSIEENLDLSLDLISSDG
                     VRIDAEPFKRESSVVRFRYCNGFGIRLVESNINTLKKVQYYCTERAKIQNDNESYNEI
                     HLQRRLECFSNRFLNEHRVDAIDITIAAFELEIKSLVDLMIKDVDSMFSELTNEEKFY
                     NIFFVNLKEYCSGKFKSMKNTLAAFGWHKKYIPWLERPHKIEFKELHCGYQQGFGFIA
                     NHLWNPKLLKVRFKEYKSLPFSIRLQWLTSHFILRRRCLAFSFFHYRKSADRPAPEAA
                     PIGTKRCGKAGVKSNIAMEVTWLLNIKFDSDSDCDSDSDYGLEMVTSDGVYFDGTPLL
                     GECLVIQARFMCGFGPKILQIDSNTLQMVMDFCEGHRNIGEDFIYDNYIFYNRLTMFN
                     SKFRQQHHKSALRLIIAAFNLSLRSLIELMMEDVVDLFNKMTTDEVYDIFSVNLKENG
                     DDRKFKFMKDRLYYYKWAFADLVSLEEKQDAGSRGVEPPNNNWNWNPELLKMTFDQYK
                     YLTFDEQRQWLTAHFLLQTPSISSAFNERFKESDVVGDVDFVVDRSNDYISQWRSRKL
                     ST"
     misc_feature    <328..552
                     /gene="LOC139840220"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; Region:
                     BTB_POZ; cl38908"
                     /db_xref="CDD:453885"
ORIGIN      
        1 aattctaatt gacaattaag atcccacata aaagtaaacc ctagagtcat tcggttcacc
       61 aatttcattc accaatccta aatcgctcgt tcaaaactct tcacaatgga catagcgtat
      121 attatgagga atcgaaaaac gtcagatgta gcaaaggata aagcaatatt aacggttgat
      181 gatttgagta tcgaagaaaa cttggatcta agcttggatc tcatctcttc ggacggggta
      241 aggattgacg ccgagccctt taaaagggag tctagtgtgg tacgattccg ttattgtaac
      301 ggttttggaa tccgattggt ggaaagcaac atcaacacac taaagaaggt tcaatattac
      361 tgtacagagc gggctaagat ccagaatgat aatgaaagtt ataatgaaat ccacctccaa
      421 cgtaggttgg agtgttttag taacagattt ctcaatgagc atcgagttga tgccattgat
      481 attacaattg ctgcttttga gttggagata aaaagcctcg tcgacttaat gattaaagat
      541 gttgattcca tgttttccga actgactaac gaagagaagt tttacaacat ctttttcgtg
      601 aacttgaaag agtattgttc cggtaaattc aaatcaatga aaaacactct tgctgccttc
      661 gggtggcaca agaaatacat accctggttg gagagacccc ataaaatcga gtttaaagag
      721 ctccattgtg ggtaccagca aggttttggc tttatagcta accacctttg gaaccctaag
      781 ttattaaaag tgcggtttaa ggagtataaa tctctgcctt tttctatacg actacaatgg
      841 ctaacatctc atttcatttt aagacgccgc tgtcttgcct tctccttctt tcactataga
      901 aaatctgcag atcgccctgc accagaagca gcaccgatcg ggacaaaacg atgtggaaaa
      961 gcaggcgtta aaagcaacat tgcaatggag gttacatggc tactaaatat taagttcgat
     1021 agcgatagcg attgtgatag cgatagcgac tacggcttgg aaatggttac ttcggatggg
     1081 gtatattttg acggaactcc tcttttaggg gagtgtctag tgatccaagc gcgatttatg
     1141 tgtggttttg gccccaagat acttcaaatt gatagcaata cccttcagat ggttatggat
     1201 ttttgtgagg gacataggaa tattggggaa gatttcatat atgataatta catcttctac
     1261 aataggctga caatgtttaa ttccaaattt cgacaacagc atcacaagag tgctcttcgt
     1321 cttatcattg ctgctttcaa tttgagtttg cgaagtctta tcgaattaat gatggaagat
     1381 gttgttgact tgttcaacaa aatgactact gatgaggttt acgacatatt ttccgtcaac
     1441 ttgaaagaga atggtgatga ccgtaaattc aagtttatga aagatcgcct atattattac
     1501 aaatgggctt ttgcggatct tgtttctttg gaagaaaaac aggatgctgg ctcaagagga
     1561 gtcgaacctc ccaacaataa ctggaattgg aatcctgagt tattaaaaat gacattcgac
     1621 caatataaat atctaacatt cgatgaacaa cgacaatggc taacggcgca tttcctttta
     1681 caaaccccct ctatttcttc tgccttcaat gagcgtttca aggaatctga tgttgtgggt
     1741 gatgtggatt ttgttgtgga tagaagcaat gattatatta gtcagtggcg ttcccgaaag
     1801 ttatcgactt aaagatgtca taaccagttg taatttactt atcatcttga tgatcaagtg
     1861 ccatggatgt attttcttct ctatcttttt aacgtggtgt ttgctgaatg cttaaactgt
     1921 atacttgttt ggttgtattt gatggatgtt ttaagtaaaa atggttctat ggtgtctcat
     1981 atttttatag gagcctgcat tgtaaaaaca tgtcta
//
LOCUS       XM_071830446            1904 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840220), transcript variant X2, mRNA.
ACCESSION   XM_071830446
VERSION     XM_071830446.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1904
                     /gene="LOC139840220"
                     /note="uncharacterized LOC139840220; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840220"
     CDS             106..1701
                     /gene="LOC139840220"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686547.1"
                     /db_xref="GeneID:139840220"
                     /translation="MDIAYIMRNRKTSDVAKDKAILTVDDLSIEENLDLSLDLISSDG
                     VRIDAEPFKRESSVVRFRYCNGFGIRLVESNINTLKKVQYYCTERAKIQNDNESYNEI
                     HLQRRLECFSNRFLNEHRVDAIDITIAAFELEIKSLVDLMIKDVDSMFSELTNEEKFY
                     NIFFVNLKEYCSGKFKSMKNTLAAFGWHKKYIPWLERPHKIEFKELHCGYQQGFGFIA
                     NHLWNPKLLKVRFKEYKSLPFSIRLQWLTSHFILRRRCLAFSFFHYRKFDSDSDCDSD
                     SDYGLEMVTSDGVYFDGTPLLGECLVIQARFMCGFGPKILQIDSNTLQMVMDFCEGHR
                     NIGEDFIYDNYIFYNRLTMFNSKFRQQHHKSALRLIIAAFNLSLRSLIELMMEDVVDL
                     FNKMTTDEVYDIFSVNLKENGDDRKFKFMKDRLYYYKWAFADLVSLEEKQDAGSRGVE
                     PPNNNWNWNPELLKMTFDQYKYLTFDEQRQWLTAHFLLQTPSISSAFNERFKESDVVG
                     DVDFVVDRSNDYISQWRSRKLST"
     misc_feature    <328..552
                     /gene="LOC139840220"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; Region:
                     BTB_POZ; cl38908"
                     /db_xref="CDD:453885"
ORIGIN      
        1 aattctaatt gacaattaag atcccacata aaagtaaacc ctagagtcat tcggttcacc
       61 aatttcattc accaatccta aatcgctcgt tcaaaactct tcacaatgga catagcgtat
      121 attatgagga atcgaaaaac gtcagatgta gcaaaggata aagcaatatt aacggttgat
      181 gatttgagta tcgaagaaaa cttggatcta agcttggatc tcatctcttc ggacggggta
      241 aggattgacg ccgagccctt taaaagggag tctagtgtgg tacgattccg ttattgtaac
      301 ggttttggaa tccgattggt ggaaagcaac atcaacacac taaagaaggt tcaatattac
      361 tgtacagagc gggctaagat ccagaatgat aatgaaagtt ataatgaaat ccacctccaa
      421 cgtaggttgg agtgttttag taacagattt ctcaatgagc atcgagttga tgccattgat
      481 attacaattg ctgcttttga gttggagata aaaagcctcg tcgacttaat gattaaagat
      541 gttgattcca tgttttccga actgactaac gaagagaagt tttacaacat ctttttcgtg
      601 aacttgaaag agtattgttc cggtaaattc aaatcaatga aaaacactct tgctgccttc
      661 gggtggcaca agaaatacat accctggttg gagagacccc ataaaatcga gtttaaagag
      721 ctccattgtg ggtaccagca aggttttggc tttatagcta accacctttg gaaccctaag
      781 ttattaaaag tgcggtttaa ggagtataaa tctctgcctt tttctatacg actacaatgg
      841 ctaacatctc atttcatttt aagacgccgc tgtcttgcct tctccttctt tcactataga
      901 aaattcgata gcgatagcga ttgtgatagc gatagcgact acggcttgga aatggttact
      961 tcggatgggg tatattttga cggaactcct cttttagggg agtgtctagt gatccaagcg
     1021 cgatttatgt gtggttttgg ccccaagata cttcaaattg atagcaatac ccttcagatg
     1081 gttatggatt tttgtgaggg acataggaat attggggaag atttcatata tgataattac
     1141 atcttctaca ataggctgac aatgtttaat tccaaatttc gacaacagca tcacaagagt
     1201 gctcttcgtc ttatcattgc tgctttcaat ttgagtttgc gaagtcttat cgaattaatg
     1261 atggaagatg ttgttgactt gttcaacaaa atgactactg atgaggttta cgacatattt
     1321 tccgtcaact tgaaagagaa tggtgatgac cgtaaattca agtttatgaa agatcgccta
     1381 tattattaca aatgggcttt tgcggatctt gtttctttgg aagaaaaaca ggatgctggc
     1441 tcaagaggag tcgaacctcc caacaataac tggaattgga atcctgagtt attaaaaatg
     1501 acattcgacc aatataaata tctaacattc gatgaacaac gacaatggct aacggcgcat
     1561 ttccttttac aaaccccctc tatttcttct gccttcaatg agcgtttcaa ggaatctgat
     1621 gttgtgggtg atgtggattt tgttgtggat agaagcaatg attatattag tcagtggcgt
     1681 tcccgaaagt tatcgactta aagatgtcat aaccagttgt aatttactta tcatcttgat
     1741 gatcaagtgc catggatgta ttttcttctc tatcttttta acgtggtgtt tgctgaatgc
     1801 ttaaactgta tacttgtttg gttgtatttg atggatgttt taagtaaaaa tggttctatg
     1861 gtgtctcata tttttatagg agcctgcatt gtaaaaacat gtct
//
LOCUS       XM_071830447            2382 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X1, mRNA.
ACCESSION   XM_071830447
VERSION     XM_071830447.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2382
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686548.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtaaga atcattgcta tgtacagtgt acataatttt tctctaatat agcgagttga
     1201 aaggctttct ctaaagcgta catagagcgg ctaaacatgg ttgtgtctgt tagttatgtt
     1261 tatgctgata tatcactcag gtttttctgc tgctggtttt tatagatagc ataatgggtg
     1321 ggtcaggtgg gttttacaag gtcaaaataa tctaacttgt gactatataa aacgtggttc
     1381 gttaacccat cttcaatctt ttgtccattc atggtaattg aatatttgta accaattaca
     1441 aatatttata tttattttaa ttattttaaa acaggtatag attcataatt attttaagag
     1501 aggagataaa gtgagataac cttagccttt tggtgttgac tgcaaataat ctgaactgac
     1561 tatgattacc tactttctaa tcatttgcat atggttttga aaggtttcaa ccatggcgac
     1621 aagagaattc tttaccaaaa aggaacattt tcctggattt gaatgggctt ttttttaatg
     1681 gtttttaatt taatgccaat atcctgctca agtatgaaaa tttatggttt tagttatata
     1741 atgggtgtta atttattgtg ttttgcttaa gttgtttttg gatattgtag gtttgggctt
     1801 aagtcagaag ctaaagttgc cacaagagga gcattaaagt cgccatggtg ggctttaggt
     1861 tgtgcaaatc aggttgtggt tagcattctt ttttgaaagc ttaacccaaa gttgtagtcc
     1921 atgaggtttg aacttgggcc ctcactaaaa ttagttagta gttcaaaaga tggattccag
     1981 ttgttaacta acatgcctac gacctaaaag ttcacaacca acactgaaca taaaagagta
     2041 gtgatgtaca gtttagccaa gattgatttt tataattacg ggagtcatga gctacaatga
     2101 agccaaaaga aggttaaatg ttacaggtgg aatagatatt acaaggttca aattctttgt
     2161 tcttttttgc acctttattt tttcaagtga actttcattg tcattggtgg tatcagtttg
     2221 taagtttgca atggaatcct tattactaag ggttgctgaa atagttgctc ttggtaaagg
     2281 actatacata tttcattgca tatgtgtgta aagaatgtct taattgggct cgtgtattct
     2341 ttaaattata tttcccaagt aattgaaaat gtgtgtaaag aa
//
LOCUS       XM_071830448            2104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X2, mRNA.
ACCESSION   XM_071830448
VERSION     XM_071830448.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2104
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686549.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtttca accatggcga caagagaatt ctttaccaaa aaggaacatt ttcctggatt
     1201 tgaatgggct tttttttaat ggtttttaat ttaatgccaa tatcctgctc aagtatgaaa
     1261 atttatggtt ttagttatat aatgggtgtt aatttattgt gttttgctta agttgttttt
     1321 ggatattgta ggtttgggct taagtcagaa gctaaagttg ccacaagagg agcattaaag
     1381 tcgccatggt gggctttagg ttgtgcaaat caggttgtgg ttagcattct tttttgaaag
     1441 cttaacccaa agttgtagtc catgaggttt gaacttgggc cctcactaaa attagttagt
     1501 agttcaaaag gttagcacta ttgttacttg ttagtagcct cttactaact tttttatacc
     1561 aatcaaccta caaaaccatt aagaacttca aatatgatat atgttgatta ttattcaaac
     1621 cttgcctttt tatattttac ttagatttat ttgcaaagta accattattg ttgaaatgca
     1681 agactactaa gatggattcc agttgttaac taacatgcct acgacctaaa agttcacaac
     1741 caacactgaa cataaaagag tagtgatgta cagtttagcc aagattgatt tttataatta
     1801 cgggagtcat gagctacaat gaagccaaaa gaaggttaaa tgttacaggt ggaatagata
     1861 ttacaaggtt caaattcttt gttctttttt gcacctttat tttttcaagt gaactttcat
     1921 tgtcattggt ggtatcagtt tgtaagtttg caatggaatc cttattacta agggttgctg
     1981 aaatagttgc tcttggtaaa ggactataca tatttcattg catatgtgtg taaagaatgt
     2041 cttaattggg ctcgtgtatt ctttaaatta tatttcccaa gtaattgaaa atgtgtgtaa
     2101 agaa
//
LOCUS       XM_071830449            2484 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X3, mRNA.
ACCESSION   XM_071830449
VERSION     XM_071830449.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2484
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686550.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtaaga atcattgcta tgtacagtgt acataatttt tctctaatat agcgagttga
     1201 aaggctttct ctaaagcgta catagagcgg ctaaacatgg ttgtgtctgt tagttatgtt
     1261 tatgctgata tatcactcag gtttttctgc tgctggtttt tatagatagc ataatgggtg
     1321 ggtcaggtgg gttttacaag gtcaaaataa tctaacttgt gactatataa aacgtggttc
     1381 gttaacccat cttcaatctt ttgtccattc atggtaattg aatatttgta accaattaca
     1441 aatatttata tttattttaa ttattttaaa acaggtatag attcataatt attttaagag
     1501 aggagataaa gtgagataac cttagccttt tggtgttgac tgcaaataat ctgaactgac
     1561 tatgattacc tactttctaa tcatttgcat atggttttga aaggtttcaa ccatggcgac
     1621 aagagaattc tttaccaaaa aggaacattt tcctggattt gaatgggctt ttttttaatg
     1681 gtttttaatt taatgccaat atcctgctca agtttgggct taagtcagaa gctaaagttg
     1741 ccacaagagg agcattaaag tcgccatggt gggctttagg ttgtgcaaat caggttgtgg
     1801 ttagcattct tttttgaaag cttaacccaa agttgtagtc catgaggttt gaacttgggc
     1861 cctcactaaa attagttagt agttcaaaag gttagcacta ttgttacttg ttagtagcct
     1921 cttactaact tttttatacc aatcaaccta caaaaccatt aagaacttca aatatgatat
     1981 atgttgatta ttattcaaac cttgcctttt tatattttac ttagatttat ttgcaaagta
     2041 accattattg ttgaaatgca agactactaa gatggattcc agttgttaac taacatgcct
     2101 acgacctaaa agttcacaac caacactgaa cataaaagag tagtgatgta cagtttagcc
     2161 aagattgatt tttataatta cgggagtcat gagctacaat gaagccaaaa gaaggttaaa
     2221 tgttacaggt ggaatagata ttacaaggtt caaattcttt gttctttttt gcacctttat
     2281 tttttcaagt gaactttcat tgtcattggt ggtatcagtt tgtaagtttg caatggaatc
     2341 cttattacta agggttgctg aaatagttgc tcttggtaaa ggactataca tatttcattg
     2401 catatgtgtg taaagaatgt cttaattggg ctcgtgtatt ctttaaatta tatttcccaa
     2461 gtaattgaaa atgtgtgtaa agaa
//
LOCUS       XM_071830451            2285 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X4, mRNA.
ACCESSION   XM_071830451
VERSION     XM_071830451.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2285
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686552.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtaaga atcattgcta tgtacagtgt acataatttt tctctaatat agcgagttga
     1201 aaggctttct ctaaagcgta catagagcgg ctaaacatgg ttgtgtctgt tagttatgtt
     1261 tatgctgata tatcactcag gtttttctgc tgctggtttt tatagatagc ataatgggtg
     1321 ggtcaggtgg gttttacaag gtcaaaataa tctaacttgt gactatataa aacgtggttc
     1381 gttaacccat cttcaatctt ttgtccattc atggtaattg aatatttgta accaattaca
     1441 aatatttata tttattttaa ttattttaaa acaggtatag attcataatt attttaagag
     1501 aggagataaa gtgagataac cttagccttt tggtgttgac tgcaaataat ctgaactgac
     1561 tatgattacc tactttctaa tcatttgcat atggttttga aaggtttcaa ccatggcgac
     1621 aagagaattc tttaccaaaa aggaacattt tcctggattt gaatgggctt ttttttaatg
     1681 gtttttaatt taatgccaat atcctgctca agtatgaaaa tttatggttt tagttatata
     1741 atgggtgtta atttattgtg ttttgcttaa gttgtttttg gatattgtag gtttgggctt
     1801 aagtcagaag ctaaagttgc cacaagagga gcattaaagt cgccatggtg ggctttaggt
     1861 tgtgcaaatc agatggattc cagttgttaa ctaacatgcc tacgacctaa aagttcacaa
     1921 ccaacactga acataaaaga gtagtgatgt acagtttagc caagattgat ttttataatt
     1981 acgggagtca tgagctacaa tgaagccaaa agaaggttaa atgttacagg tggaatagat
     2041 attacaaggt tcaaattctt tgttcttttt tgcaccttta ttttttcaag tgaactttca
     2101 ttgtcattgg tggtatcagt ttgtaagttt gcaatggaat ccttattact aagggttgct
     2161 gaaatagttg ctcttggtaa aggactatac atatttcatt gcatatgtgt gtaaagaatg
     2221 tcttaattgg gctcgtgtat tctttaaatt atatttccca agtaattgaa aatgtgtgta
     2281 aagaa
//
LOCUS       XM_071830452            2489 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X5, mRNA.
ACCESSION   XM_071830452
VERSION     XM_071830452.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2489
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             215..664
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686553.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aatagcatgt tgcgaaaatt ttgatagcag aaatatggaa tcagtccaaa tccgatatag
      241 tgaagagatt tacgcattca ggatgatgaa tcatacatat aatctgttct tctgcgtttc
      301 gatggtcaac cagatgtgga tgaagaggac tttcaatgtt gtcgaaagtg gtgaccctaa
      361 cacaacagag tggatatcac taaaagctgc gagagaagtg aaaacattga ttgacaagtt
      421 tacaaagccc gaagcgtatg ttgtcgacga tcttaatcat ttaaagagga cggccagaca
      481 aggtaaaatt gtggttcgtc gaaatgtcag tagaatttgt gataaagatg gttggttcca
      541 gcattgctgc aaaaaatgtc agaaaggtag tagagatgtc agtggacaaa gaggaagttg
      601 ttttttgagt gtcctaactg taaaactgaa gctgaaatat gaaatatctg ccaaactcta
      661 ttaacatgat tcgtgttacc atctgcattc ttgataagac tggatattgt gaattgattc
      721 tactcagcta ttgaaattga ctgctaaaag caccacctgg ctgaatgcgc ttgcacctac
      781 ttgtgttatc cacgggatat cccttaggag ctgtacgatg tcatacataa aaactttgtt
      841 ttcataatcc agctgtctac tttcaacctt aacatcaata atgatgggtt cactgttgtt
      901 aatgtgactg atgaaggtga caacatgggc gggacaaggc tgattacatg tcagattgag
      961 aaagagccct ataagagaga ctttaaatat gttgatgcta cttgacccaa gcataaaagc
     1021 aaagaagaat ttatgaatag tgaagaagtt tcaaagttac tatcaggata gtaagaatca
     1081 ttgctatgta cagtgtacat aatttttctc taatatagcg agttgaaagg ctttctctaa
     1141 agcgtacata gagcggctaa acatggttgt gtctgttagt tatgtttatg ctgatatatc
     1201 actcaggttt ttctgctgct ggtttttata gatagcataa tgggtgggtc aggtgggttt
     1261 tacaaggtca aaataatcta acttgtgact atataaaacg tggttcgtta acccatcttc
     1321 aatcttttgt ccattcatgg taattgaata tttgtaacca attacaaata tttatattta
     1381 ttttaattat tttaaaacag gtatagattc ataattattt taagagagga gataaagtga
     1441 gataacctta gccttttggt gttgactgca aataatctga actgactatg attacctact
     1501 ttctaatcat ttgcatatgg ttttgaaagg tttcaaccat ggcgacaaga gaattcttta
     1561 ccaaaaagga acattttcct ggatttgaat gggctttttt ttaatggttt ttaatttaat
     1621 gccaatatcc tgctcaagta tgaaaattta tggttttagt tatataatgg gtgttaattt
     1681 attgtgtttt gcttaagttg tttttggata ttgtaggttt gggcttaagt cagaagctaa
     1741 agttgccaca agaggagcat taaagtcgcc atggtgggct ttaggttgtg caaatcaggt
     1801 tgtggttagc attctttttt gaaagcttaa cccaaagttg tagtccatga ggtttgaact
     1861 tgggccctca ctaaaattag ttagtagttc aaaaggttag cactattgtt acttgttagt
     1921 agcctcttac taactttttt ataccaatca acctacaaaa ccattaagaa cttcaaatat
     1981 gatatatgtt gattattatt caaaccttgc ctttttatat tttacttaga tttatttgca
     2041 aagtaaccat tattgttgaa atgcaagact actaagatgg attccagttg ttaactaaca
     2101 tgcctacgac ctaaaagttc acaaccaaca ctgaacataa aagagtagtg atgtacagtt
     2161 tagccaagat tgatttttat aattacggga gtcatgagct acaatgaagc caaaagaagg
     2221 ttaaatgtta caggtggaat agatattaca aggttcaaat tctttgttct tttttgcacc
     2281 tttatttttt caagtgaact ttcattgtca ttggtggtat cagtttgtaa gtttgcaatg
     2341 gaatccttat tactaagggt tgctgaaata gttgctcttg gtaaaggact atacatattt
     2401 cattgcatat gtgtgtaaag aatgtcttaa ttgggctcgt gtattcttta aattatattt
     2461 cccaagtaat tgaaaatgtg tgtaaagaa
//
LOCUS       XM_071830453            2464 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X6, mRNA.
ACCESSION   XM_071830453
VERSION     XM_071830453.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2464
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             190..639
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686554.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aatagaaata tggaatcagt ccaaatccga tatagtgaag agatttacgc attcaggatg
      241 atgaatcata catataatct gttcttctgc gtttcgatgg tcaaccagat gtggatgaag
      301 aggactttca atgttgtcga aagtggtgac cctaacacaa cagagtggat atcactaaaa
      361 gctgcgagag aagtgaaaac attgattgac aagtttacaa agcccgaagc gtatgttgtc
      421 gacgatctta atcatttaaa gaggacggcc agacaaggta aaattgtggt tcgtcgaaat
      481 gtcagtagaa tttgtgataa agatggttgg ttccagcatt gctgcaaaaa atgtcagaaa
      541 ggtagtagag atgtcagtgg acaaagagga agttgttttt tgagtgtcct aactgtaaaa
      601 ctgaagctga aatatgaaat atctgccaaa ctctattaac atgattcgtg ttaccatctg
      661 cattcttgat aagactggat attgtgaatt gattctactc agctattgaa attgactgct
      721 aaaagcacca cctggctgaa tgcgcttgca cctacttgtg ttatccacgg gatatccctt
      781 aggagctgta cgatgtcata cataaaaact ttgttttcat aatccagctg tctactttca
      841 accttaacat caataatgat gggttcactg ttgttaatgt gactgatgaa ggtgacaaca
      901 tgggcgggac aaggctgatt acatgtcaga ttgagaaaga gccctataag agagacttta
      961 aatatgttga tgctacttga cccaagcata aaagcaaaga agaatttatg aatagtgaag
     1021 aagtttcaaa gttactatca ggatagtaag aatcattgct atgtacagtg tacataattt
     1081 ttctctaata tagcgagttg aaaggctttc tctaaagcgt acatagagcg gctaaacatg
     1141 gttgtgtctg ttagttatgt ttatgctgat atatcactca ggtttttctg ctgctggttt
     1201 ttatagatag cataatgggt gggtcaggtg ggttttacaa ggtcaaaata atctaacttg
     1261 tgactatata aaacgtggtt cgttaaccca tcttcaatct tttgtccatt catggtaatt
     1321 gaatatttgt aaccaattac aaatatttat atttatttta attattttaa aacaggtata
     1381 gattcataat tattttaaga gaggagataa agtgagataa ccttagcctt ttggtgttga
     1441 ctgcaaataa tctgaactga ctatgattac ctactttcta atcatttgca tatggttttg
     1501 aaaggtttca accatggcga caagagaatt ctttaccaaa aaggaacatt ttcctggatt
     1561 tgaatgggct tttttttaat ggtttttaat ttaatgccaa tatcctgctc aagtatgaaa
     1621 atttatggtt ttagttatat aatgggtgtt aatttattgt gttttgctta agttgttttt
     1681 ggatattgta ggtttgggct taagtcagaa gctaaagttg ccacaagagg agcattaaag
     1741 tcgccatggt gggctttagg ttgtgcaaat caggttgtgg ttagcattct tttttgaaag
     1801 cttaacccaa agttgtagtc catgaggttt gaacttgggc cctcactaaa attagttagt
     1861 agttcaaaag gttagcacta ttgttacttg ttagtagcct cttactaact tttttatacc
     1921 aatcaaccta caaaaccatt aagaacttca aatatgatat atgttgatta ttattcaaac
     1981 cttgcctttt tatattttac ttagatttat ttgcaaagta accattattg ttgaaatgca
     2041 agactactaa gatggattcc agttgttaac taacatgcct acgacctaaa agttcacaac
     2101 caacactgaa cataaaagag tagtgatgta cagtttagcc aagattgatt tttataatta
     2161 cgggagtcat gagctacaat gaagccaaaa gaaggttaaa tgttacaggt ggaatagata
     2221 ttacaaggtt caaattcttt gttctttttt gcacctttat tttttcaagt gaactttcat
     2281 tgtcattggt ggtatcagtt tgtaagtttg caatggaatc cttattacta agggttgctg
     2341 aaatagttgc tcttggtaaa ggactataca tatttcattg catatgtgtg taaagaatgt
     2401 cttaattggg ctcgtgtatt ctttaaatta tatttcccaa gtaattgaaa atgtgtgtaa
     2461 agaa
//
LOCUS       XM_071830454            2025 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X7, mRNA.
ACCESSION   XM_071830454
VERSION     XM_071830454.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2025
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686555.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtttca accatggcga caagagaatt ctttaccaaa aaggaacatt ttcctggatt
     1201 tgaatgggct tttttttaat ggtttttaat ttaatgccaa tatcctgctc aagtttgggc
     1261 ttaagtcaga agctaaagtt gccacaagag gagcattaaa gtcgccatgg tgggctttag
     1321 gttgtgcaaa tcaggttgtg gttagcattc ttttttgaaa gcttaaccca aagttgtagt
     1381 ccatgaggtt tgaacttggg ccctcactaa aattagttag tagttcaaaa ggttagcact
     1441 attgttactt gttagtagcc tcttactaac ttttttatac caatcaacct acaaaaccat
     1501 taagaacttc aaatatgata tatgttgatt attattcaaa ccttgccttt ttatatttta
     1561 cttagattta tttgcaaagt aaccattatt gttgaaatgc aagactacta agatggattc
     1621 cagttgttaa ctaacatgcc tacgacctaa aagttcacaa ccaacactga acataaaaga
     1681 gtagtgatgt acagtttagc caagattgat ttttataatt acgggagtca tgagctacaa
     1741 tgaagccaaa agaaggttaa atgttacagg tggaatagat attacaaggt tcaaattctt
     1801 tgttcttttt tgcaccttta ttttttcaag tgaactttca ttgtcattgg tggtatcagt
     1861 ttgtaagttt gcaatggaat ccttattact aagggttgct gaaatagttg ctcttggtaa
     1921 aggactatac atatttcatt gcatatgtgt gtaaagaatg tcttaattgg gctcgtgtat
     1981 tctttaaatt atatttccca agtaattgaa aatgtgtgta aagaa
//
LOCUS       XM_071830455            2291 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X8, mRNA.
ACCESSION   XM_071830455
VERSION     XM_071830455.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2291
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686556.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtaaga atcattgcta tgtacagtgt acataatttt tctctaatat agcgagttga
     1201 aaggctttct ctaaagcgta catagagcgg ctaaacatgg ttgtgtctgt tagttatgtt
     1261 tatgctgata tatcactcag gtttttctgc tgctggtttt tatagatagc ataatgggtg
     1321 ggtcaggtgg gttttacaag gtcaaaataa tctaacttgt gactatataa aacgtggttc
     1381 gttaacccat cttcaatctt ttgtccattc atggtaattg aatatttgta accaattaca
     1441 aatatttata tttattttaa ttattttaaa acaggtatag attcataatt attttaagag
     1501 aggagataaa gtgagataac cttagccttt tggtgttgac tgcaaataat ctgaactgac
     1561 tatgattacc tactttctaa tcatttgcat atggttttga aaggtttcaa ccatggcgac
     1621 aagagaattc tttaccaaaa aggaacattt tcctggattt gaatgggctt ttttttaatg
     1681 gtttttaatt taatgccaat atcctgctca agtatgaaaa tttatggttt tagttatata
     1741 atgggtgtta atttattgtg ttttgcttaa gttgtttttg gatattgtag gtttgggctt
     1801 aagtcagaag ctaaagttgc cacaagagga gcattaaagt cgccatggtg ggctttaggt
     1861 tgtgcaaatc aggttgtgat ggattccagt tgttaactaa catgcctacg acctaaaagt
     1921 tcacaaccaa cactgaacat aaaagagtag tgatgtacag tttagccaag attgattttt
     1981 ataattacgg gagtcatgag ctacaatgaa gccaaaagaa ggttaaatgt tacaggtgga
     2041 atagatatta caaggttcaa attctttgtt cttttttgca cctttatttt ttcaagtgaa
     2101 ctttcattgt cattggtggt atcagtttgt aagtttgcaa tggaatcctt attactaagg
     2161 gttgctgaaa tagttgctct tggtaaagga ctatacatat ttcattgcat atgtgtgtaa
     2221 agaatgtctt aattgggctc gtgtattctt taaattatat ttcccaagta attgaaaatg
     2281 tgtgtaaaga a
//
LOCUS       XM_071830456            2206 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X9, mRNA.
ACCESSION   XM_071830456
VERSION     XM_071830456.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2206
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686557.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtaaga atcattgcta tgtacagtgt acataatttt tctctaatat agcgagttga
     1201 aaggctttct ctaaagcgta catagagcgg ctaaacatgg ttgtgtctgt tagttatgtt
     1261 tatgctgata tatcactcag gtttttctgc tgctggtttt tatagatagc ataatgggtg
     1321 ggtcaggtgg gttttacaag gtcaaaataa tctaacttgt gactatataa aacgtggttc
     1381 gttaacccat cttcaatctt ttgtccattc atggtaattg aatatttgta accaattaca
     1441 aatatttata tttattttaa ttattttaaa acaggtatag attcataatt attttaagag
     1501 aggagataaa gtgagataac cttagccttt tggtgttgac tgcaaataat ctgaactgac
     1561 tatgattacc tactttctaa tcatttgcat atggttttga aaggtttcaa ccatggcgac
     1621 aagagaattc tttaccaaaa aggaacattt tcctggattt gaatgggctt ttttttaatg
     1681 gtttttaatt taatgccaat atcctgctca agtttgggct taagtcagaa gctaaagttg
     1741 ccacaagagg agcattaaag tcgccatggt gggctttagg ttgtgcaaat cagatggatt
     1801 ccagttgtta actaacatgc ctacgaccta aaagttcaca accaacactg aacataaaag
     1861 agtagtgatg tacagtttag ccaagattga tttttataat tacgggagtc atgagctaca
     1921 atgaagccaa aagaaggtta aatgttacag gtggaataga tattacaagg ttcaaattct
     1981 ttgttctttt ttgcaccttt attttttcaa gtgaactttc attgtcattg gtggtatcag
     2041 tttgtaagtt tgcaatggaa tccttattac taagggttgc tgaaatagtt gctcttggta
     2101 aaggactata catatttcat tgcatatgtg tgtaaagaat gtcttaattg ggctcgtgta
     2161 ttctttaaat tatatttccc aagtaattga aaatgtgtgt aaagaa
//
LOCUS       XM_071830457            2428 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X10, mRNA.
ACCESSION   XM_071830457
VERSION     XM_071830457.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2428
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686558.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctactgtgac aacatgggcg ggacaaggct gattacatgt cagattgaga
      901 aagagcccta taagagagac tttaaatatg ttgatgctac ttgacccaag cataaaagca
      961 aagaagaatt tatgaatagt gaagaagttt caaagttact atcaggatag taagaatcat
     1021 tgctatgtac agtgtacata atttttctct aatatagcga gttgaaaggc tttctctaaa
     1081 gcgtacatag agcggctaaa catggttgtg tctgttagtt atgtttatgc tgatatatca
     1141 ctcaggtttt tctgctgctg gtttttatag atagcataat gggtgggtca ggtgggtttt
     1201 acaaggtcaa aataatctaa cttgtgacta tataaaacgt ggttcgttaa cccatcttca
     1261 atcttttgtc cattcatggt aattgaatat ttgtaaccaa ttacaaatat ttatatttat
     1321 tttaattatt ttaaaacagg tatagattca taattatttt aagagaggag ataaagtgag
     1381 ataaccttag ccttttggtg ttgactgcaa ataatctgaa ctgactatga ttacctactt
     1441 tctaatcatt tgcatatggt tttgaaaggt ttcaaccatg gcgacaagag aattctttac
     1501 caaaaaggaa cattttcctg gatttgaatg ggcttttttt taatggtttt taatttaatg
     1561 ccaatatcct gctcaagtat gaaaatttat ggttttagtt atataatggg tgttaattta
     1621 ttgtgttttg cttaagttgt ttttggatat tgtaggtttg ggcttaagtc agaagctaaa
     1681 gttgccacaa gaggagcatt aaagtcgcca tggtgggctt taggttgtgc aaatcaggtt
     1741 gtggttagca ttcttttttg aaagcttaac ccaaagttgt agtccatgag gtttgaactt
     1801 gggccctcac taaaattagt tagtagttca aaaggttagc actattgtta cttgttagta
     1861 gcctcttact aactttttta taccaatcaa cctacaaaac cattaagaac ttcaaatatg
     1921 atatatgttg attattattc aaaccttgcc tttttatatt ttacttagat ttatttgcaa
     1981 agtaaccatt attgttgaaa tgcaagacta ctaagatgga ttccagttgt taactaacat
     2041 gcctacgacc taaaagttca caaccaacac tgaacataaa agagtagtga tgtacagttt
     2101 agccaagatt gatttttata attacgggag tcatgagcta caatgaagcc aaaagaaggt
     2161 taaatgttac aggtggaata gatattacaa ggttcaaatt ctttgttctt ttttgcacct
     2221 ttattttttc aagtgaactt tcattgtcat tggtggtatc agtttgtaag tttgcaatgg
     2281 aatccttatt actaagggtt gctgaaatag ttgctcttgg taaaggacta tacatatttc
     2341 attgcatatg tgtgtaaaga atgtcttaat tgggctcgtg tattctttaa attatatttc
     2401 ccaagtaatt gaaaatgtgt gtaaagaa
//
LOCUS       XM_071830458            1917 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X11, mRNA.
ACCESSION   XM_071830458
VERSION     XM_071830458.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1917
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686559.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtttgg gcttaagtca gaagctaaag ttgccacaag aggagcatta aagtcgccat
     1201 ggtgggcttt aggttgtgca aatcaggttg tggttagcat tcttttttga aagcttaacc
     1261 caaagttgta gtccatgagg tttgaacttg ggccctcact aaaattagtt agtagttcaa
     1321 aaggttagca ctattgttac ttgttagtag cctcttacta acttttttat accaatcaac
     1381 ctacaaaacc attaagaact tcaaatatga tatatgttga ttattattca aaccttgcct
     1441 ttttatattt tacttagatt tatttgcaaa gtaaccatta ttgttgaaat gcaagactac
     1501 taagatggat tccagttgtt aactaacatg cctacgacct aaaagttcac aaccaacact
     1561 gaacataaaa gagtagtgat gtacagttta gccaagattg atttttataa ttacgggagt
     1621 catgagctac aatgaagcca aaagaaggtt aaatgttaca ggtggaatag atattacaag
     1681 gttcaaattc tttgttcttt tttgcacctt tattttttca agtgaacttt cattgtcatt
     1741 ggtggtatca gtttgtaagt ttgcaatgga atccttatta ctaagggttg ctgaaatagt
     1801 tgctcttggt aaaggactat acatatttca ttgcatatgt gtgtaaagaa tgtcttaatt
     1861 gggctcgtgt attctttaaa ttatatttcc caagtaattg aaaatgtgtg taaagaa
//
LOCUS       XM_071830459            1639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X12, mRNA.
ACCESSION   XM_071830459
VERSION     XM_071830459.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1639
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686560.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctacttgtgt tatccacggg atatccctta ggagctgtac gatgtcatac
      901 ataaaaactt tgttttcata atccagctgt ctactttcaa ccttaacatc aataatgatg
      961 ggttcactgt tgttaatgtg actgatgaag gtgacaacat gggcgggaca aggctgatta
     1021 catgtcagat tgagaaagag ccctataaga gagactttaa atatgttgat gctacttgac
     1081 ccaagcataa aagcaaagaa gaatttatga atagtgaaga agtttcaaag ttactatcag
     1141 gatagtttgg gcttaagtca gaagctaaag ttgccacaag aggagcatta aagtcgccat
     1201 ggtgggcttt aggttgtgca aatcagatgg attccagttg ttaactaaca tgcctacgac
     1261 ctaaaagttc acaaccaaca ctgaacataa aagagtagtg atgtacagtt tagccaagat
     1321 tgatttttat aattacggga gtcatgagct acaatgaagc caaaagaagg ttaaatgtta
     1381 caggtggaat agatattaca aggttcaaat tctttgttct tttttgcacc tttatttttt
     1441 caagtgaact ttcattgtca ttggtggtat cagtttgtaa gtttgcaatg gaatccttat
     1501 tactaagggt tgctgaaata gttgctcttg gtaaaggact atacatattt cattgcatat
     1561 gtgtgtaaag aatgtcttaa ttgggctcgt gtattcttta aattatattt cccaagtaat
     1621 tgaaaatgtg tgtaaagaa
//
LOCUS       XM_071830460            1815 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X13, mRNA.
ACCESSION   XM_071830460
VERSION     XM_071830460.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1815
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..738
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686561.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaaac tctattaaca tgattcgtgt taccatctgc attcttgata agactggata
      781 ttgtgaattg attctactca gctattgaaa ttgactgcta aaagcaccac ctggctgaat
      841 gcgcttgcac ctactgtttc aaccatggcg acaagagaat tctttaccaa aaaggaacat
      901 tttcctggat ttgaatgggc ttttttttaa tggtttttaa tttaatgcca atatcctgct
      961 caagtatgaa aatttatggt tttagttata taatgggtgt taatttattg tgttttgctt
     1021 aagttgtttt tggatattgt aggtttgggc ttaagtcaga agctaaagtt gccacaagag
     1081 gagcattaaa gtcgccatgg tgggctttag gttgtgcaaa tcaggttgtg gttagcattc
     1141 ttttttgaaa gcttaaccca aagttgtagt ccatgaggtt tgaacttggg ccctcactaa
     1201 aattagttag tagttcaaaa ggttagcact attgttactt gttagtagcc tcttactaac
     1261 ttttttatac caatcaacct acaaaaccat taagaacttc aaatatgata tatgttgatt
     1321 attattcaaa ccttgccttt ttatatttta cttagattta tttgcaaagt aaccattatt
     1381 gttgaaatgc aagactacta agatggattc cagttgttaa ctaacatgcc tacgacctaa
     1441 aagttcacaa ccaacactga acataaaaga gtagtgatgt acagtttagc caagattgat
     1501 ttttataatt acgggagtca tgagctacaa tgaagccaaa agaaggttaa atgttacagg
     1561 tggaatagat attacaaggt tcaaattctt tgttcttttt tgcaccttta ttttttcaag
     1621 tgaactttca ttgtcattgg tggtatcagt ttgtaagttt gcaatggaat ccttattact
     1681 aagggttgct gaaatagttg ctcttggtaa aggactatac atatttcatt gcatatgtgt
     1741 gtaaagaatg tcttaattgg gctcgtgtat tctttaaatt atatttccca agtaattgaa
     1801 aatgtgtgta aagaa
//
LOCUS       XM_071830461            2490 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X14, mRNA.
ACCESSION   XM_071830461
VERSION     XM_071830461.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2490
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..735
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686562.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISANY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaact attgaaattg actgctaaaa gcaccacctg gctgaatgcg cttgcaccta
      781 cttgtgttat ccacgggata tcccttagga gctgtacgat gtcatacata aaaactttgt
      841 tttcataatc cagctgtcta ctttcaacct taacatcaat aatgatgggt tcactgttgt
      901 taatgtgact gatgaaggtg acaacatggg cgggacaagg ctgattacat gtcagattga
      961 gaaagagccc tataagagag actttaaata tgttgatgct acttgaccca agcataaaag
     1021 caaagaagaa tttatgaata gtgaagaagt ttcaaagtta ctatcaggat agtaagaatc
     1081 attgctatgt acagtgtaca taatttttct ctaatatagc gagttgaaag gctttctcta
     1141 aagcgtacat agagcggcta aacatggttg tgtctgttag ttatgtttat gctgatatat
     1201 cactcaggtt tttctgctgc tggtttttat agatagcata atgggtgggt caggtgggtt
     1261 ttacaaggtc aaaataatct aacttgtgac tatataaaac gtggttcgtt aacccatctt
     1321 caatcttttg tccattcatg gtaattgaat atttgtaacc aattacaaat atttatattt
     1381 attttaatta ttttaaaaca ggtatagatt cataattatt ttaagagagg agataaagtg
     1441 agataacctt agccttttgg tgttgactgc aaataatctg aactgactat gattacctac
     1501 tttctaatca tttgcatatg gttttgaaag gtttcaacca tggcgacaag agaattcttt
     1561 accaaaaagg aacattttcc tggatttgaa tgggcttttt tttaatggtt tttaatttaa
     1621 tgccaatatc ctgctcaagt atgaaaattt atggttttag ttatataatg ggtgttaatt
     1681 tattgtgttt tgcttaagtt gtttttggat attgtaggtt tgggcttaag tcagaagcta
     1741 aagttgccac aagaggagca ttaaagtcgc catggtgggc tttaggttgt gcaaatcagg
     1801 ttgtggttag cattcttttt tgaaagctta acccaaagtt gtagtccatg aggtttgaac
     1861 ttgggccctc actaaaatta gttagtagtt caaaaggtta gcactattgt tacttgttag
     1921 tagcctctta ctaacttttt tataccaatc aacctacaaa accattaaga acttcaaata
     1981 tgatatatgt tgattattat tcaaaccttg cctttttata ttttacttag atttatttgc
     2041 aaagtaacca ttattgttga aatgcaagac tactaagatg gattccagtt gttaactaac
     2101 atgcctacga cctaaaagtt cacaaccaac actgaacata aaagagtagt gatgtacagt
     2161 ttagccaaga ttgattttta taattacggg agtcatgagc tacaatgaag ccaaaagaag
     2221 gttaaatgtt acaggtggaa tagatattac aaggttcaaa ttctttgttc ttttttgcac
     2281 ctttattttt tcaagtgaac tttcattgtc attggtggta tcagtttgta agtttgcaat
     2341 ggaatcctta ttactaaggg ttgctgaaat agttgctctt ggtaaaggac tatacatatt
     2401 tcattgcata tgtgtgtaaa gaatgtctta attgggctcg tgtattcttt aaattatatt
     2461 tcccaagtaa ttgaaaatgt gtgtaaagaa
//
LOCUS       XM_071830462            2355 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X15, mRNA.
ACCESSION   XM_071830462
VERSION     XM_071830462.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2355
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             289..735
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686563.1"
                     /db_xref="GeneID:139840222"
                     /translation="MESVQIRYSEEIYAFRMMNHTYNLFFCVSMVNQMWMKRTFNVVE
                     SGDPNTTEWISLKAAREVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRIC
                     DKDGWFQHCCKKCQKGSRDVSGQRGSCFLSVLTVKLKLKYEISANY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggactttcaa tgttgtcgaa
      421 agtggtgacc ctaacacaac agagtggata tcactaaaag ctgcgagaga agtgaaaaca
      481 ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg acgatcttaa tcatttaaag
      541 aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg tcagtagaat ttgtgataaa
      601 gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag gtagtagaga tgtcagtgga
      661 caaagaggaa gttgtttttt gagtgtccta actgtaaaac tgaagctgaa atatgaaata
      721 tctgccaact attgaaattg actgctaaaa gcaccacctg gctgaatgcg cttgcaccta
      781 ctgtgacaac atgggcggga caaggctgat tacatgtcag attgagaaag agccctataa
      841 gagagacttt aaatatgttg atgctacttg acccaagcat aaaagcaaag aagaatttat
      901 gaatagtgaa gaagtttcaa agttactatc aggatagtaa gaatcattgc tatgtacagt
      961 gtacataatt tttctctaat atagcgagtt gaaaggcttt ctctaaagcg tacatagagc
     1021 ggctaaacat ggttgtgtct gttagttatg tttatgctga tatatcactc aggtttttct
     1081 gctgctggtt tttatagata gcataatggg tgggtcaggt gggttttaca aggtcaaaat
     1141 aatctaactt gtgactatat aaaacgtggt tcgttaaccc atcttcaatc ttttgtccat
     1201 tcatggtaat tgaatatttg taaccaatta caaatattta tatttatttt aattatttta
     1261 aaacaggtat agattcataa ttattttaag agaggagata aagtgagata accttagcct
     1321 tttggtgttg actgcaaata atctgaactg actatgatta cctactttct aatcatttgc
     1381 atatggtttt gaaaggtttc aaccatggcg acaagagaat tctttaccaa aaaggaacat
     1441 tttcctggat ttgaatgggc ttttttttaa tggtttttaa tttaatgcca atatcctgct
     1501 caagtatgaa aatttatggt tttagttata taatgggtgt taatttattg tgttttgctt
     1561 aagttgtttt tggatattgt aggtttgggc ttaagtcaga agctaaagtt gccacaagag
     1621 gagcattaaa gtcgccatgg tgggctttag gttgtgcaaa tcaggttgtg gttagcattc
     1681 ttttttgaaa gcttaaccca aagttgtagt ccatgaggtt tgaacttggg ccctcactaa
     1741 aattagttag tagttcaaaa ggttagcact attgttactt gttagtagcc tcttactaac
     1801 ttttttatac caatcaacct acaaaaccat taagaacttc aaatatgata tatgttgatt
     1861 attattcaaa ccttgccttt ttatatttta cttagattta tttgcaaagt aaccattatt
     1921 gttgaaatgc aagactacta agatggattc cagttgttaa ctaacatgcc tacgacctaa
     1981 aagttcacaa ccaacactga acataaaaga gtagtgatgt acagtttagc caagattgat
     2041 ttttataatt acgggagtca tgagctacaa tgaagccaaa agaaggttaa atgttacagg
     2101 tggaatagat attacaaggt tcaaattctt tgttcttttt tgcaccttta ttttttcaag
     2161 tgaactttca ttgtcattgg tggtatcagt ttgtaagttt gcaatggaat ccttattact
     2221 aagggttgct gaaatagttg ctcttggtaa aggactatac atatttcatt gcatatgtgt
     2281 gtaaagaatg tcttaattgg gctcgtgtat tctttaaatt atatttccca agtaattgaa
     2341 aatgtgtgta aagaa
//
LOCUS       XM_071830463            2552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X16, mRNA.
ACCESSION   XM_071830463
VERSION     XM_071830463.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2552
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             326..727
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071686564.1"
                     /db_xref="GeneID:139840222"
                     /translation="MMNHTYNLFFCVSMVNQMWMKRTFNVVESGDPNTTEWISLKAAR
                     EVKTLIDKFTKPEAYVVDDLNHLKRTARQGKIVVRRNVSRICDKDGWFQHCCKKCQKG
                     SRDVSGQRGSCFLSVLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aatagcatgt tgcgaaaatt ttgatagcag aaatatggaa tcagtccaaa tccgatatag
      241 tgaagagatt tacgcattca ggtagtctaa agttcaagcg ggtgaacctt catgtaaatt
      301 caccataggt gtcaaaatag acgggatgat gaatcataca tataatctgt tcttctgcgt
      361 ttcgatggtc aaccagatgt ggatgaagag gactttcaat gttgtcgaaa gtggtgaccc
      421 taacacaaca gagtggatat cactaaaagc tgcgagagaa gtgaaaacat tgattgacaa
      481 gtttacaaag cccgaagcgt atgttgtcga cgatcttaat catttaaaga ggacggccag
      541 acaaggtaaa attgtggttc gtcgaaatgt cagtagaatt tgtgataaag atggttggtt
      601 ccagcattgc tgcaaaaaat gtcagaaagg tagtagagat gtcagtggac aaagaggaag
      661 ttgttttttg agtgtcctaa ctgtaaaact gaagctgaaa tatgaaatat ctgccaaact
      721 ctattaacat gattcgtgtt accatctgca ttcttgataa gactggatat tgtgaattga
      781 ttctactcag ctattgaaat tgactgctaa aagcaccacc tggctgaatg cgcttgcacc
      841 tacttgtgtt atccacggga tatcccttag gagctgtacg atgtcataca taaaaacttt
      901 gttttcataa tccagctgtc tactttcaac cttaacatca ataatgatgg gttcactgtt
      961 gttaatgtga ctgatgaagg tgacaacatg ggcgggacaa ggctgattac atgtcagatt
     1021 gagaaagagc cctataagag agactttaaa tatgttgatg ctacttgacc caagcataaa
     1081 agcaaagaag aatttatgaa tagtgaagaa gtttcaaagt tactatcagg atagtaagaa
     1141 tcattgctat gtacagtgta cataattttt ctctaatata gcgagttgaa aggctttctc
     1201 taaagcgtac atagagcggc taaacatggt tgtgtctgtt agttatgttt atgctgatat
     1261 atcactcagg tttttctgct gctggttttt atagatagca taatgggtgg gtcaggtggg
     1321 ttttacaagg tcaaaataat ctaacttgtg actatataaa acgtggttcg ttaacccatc
     1381 ttcaatcttt tgtccattca tggtaattga atatttgtaa ccaattacaa atatttatat
     1441 ttattttaat tattttaaaa caggtataga ttcataatta ttttaagaga ggagataaag
     1501 tgagataacc ttagcctttt ggtgttgact gcaaataatc tgaactgact atgattacct
     1561 actttctaat catttgcata tggttttgaa aggtttcaac catggcgaca agagaattct
     1621 ttaccaaaaa ggaacatttt cctggatttg aatgggcttt tttttaatgg tttttaattt
     1681 aatgccaata tcctgctcaa gtatgaaaat ttatggtttt agttatataa tgggtgttaa
     1741 tttattgtgt tttgcttaag ttgtttttgg atattgtagg tttgggctta agtcagaagc
     1801 taaagttgcc acaagaggag cattaaagtc gccatggtgg gctttaggtt gtgcaaatca
     1861 ggttgtggtt agcattcttt tttgaaagct taacccaaag ttgtagtcca tgaggtttga
     1921 acttgggccc tcactaaaat tagttagtag ttcaaaaggt tagcactatt gttacttgtt
     1981 agtagcctct tactaacttt tttataccaa tcaacctaca aaaccattaa gaacttcaaa
     2041 tatgatatat gttgattatt attcaaacct tgccttttta tattttactt agatttattt
     2101 gcaaagtaac cattattgtt gaaatgcaag actactaaga tggattccag ttgttaacta
     2161 acatgcctac gacctaaaag ttcacaacca acactgaaca taaaagagta gtgatgtaca
     2221 gtttagccaa gattgatttt tataattacg ggagtcatga gctacaatga agccaaaaga
     2281 aggttaaatg ttacaggtgg aatagatatt acaaggttca aattctttgt tcttttttgc
     2341 acctttattt tttcaagtga actttcattg tcattggtgg tatcagtttg taagtttgca
     2401 atggaatcct tattactaag ggttgctgaa atagttgctc ttggtaaagg actatacata
     2461 tttcattgca tatgtgtgta aagaatgtct taattgggct cgtgtattct ttaaattata
     2521 tttcccaagt aattgaaaat gtgtgtaaag aa
//
LOCUS       XM_071830464            2715 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X17, mRNA.
ACCESSION   XM_071830464
VERSION     XM_071830464.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2715
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             531..890
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071686565.1"
                     /db_xref="GeneID:139840222"
                     /translation="MISPLEGRTFNVVESGDPNTTEWISLKAAREVKTLIDKFTKPEA
                     YVVDDLNHLKRTARQGKIVVRRNVSRICDKDGWFQHCCKKCQKGSRDVSGQRGSCFLS
                     VLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga ggtatgtagc tagatgattg
      421 atagtcaaac gatgtgcata tggaagttga aatgaaaaga gttacttgta tagttcttag
      481 attaatacgg caatttttta gctataagag tggacgtgca cttgaagtac atgatatctc
      541 ccttagaagg aaggactttc aatgttgtcg aaagtggtga ccctaacaca acagagtgga
      601 tatcactaaa agctgcgaga gaagtgaaaa cattgattga caagtttaca aagcccgaag
      661 cgtatgttgt cgacgatctt aatcatttaa agaggacggc cagacaaggt aaaattgtgg
      721 ttcgtcgaaa tgtcagtaga atttgtgata aagatggttg gttccagcat tgctgcaaaa
      781 aatgtcagaa aggtagtaga gatgtcagtg gacaaagagg aagttgtttt ttgagtgtcc
      841 taactgtaaa actgaagctg aaatatgaaa tatctgccaa actctattaa catgattcgt
      901 gttaccatct gcattcttga taagactgga tattgtgaat tgattctact cagctattga
      961 aattgactgc taaaagcacc acctggctga atgcgcttgc acctacttgt gttatccacg
     1021 ggatatccct taggagctgt acgatgtcat acataaaaac tttgttttca taatccagct
     1081 gtctactttc aaccttaaca tcaataatga tgggttcact gttgttaatg tgactgatga
     1141 aggtgacaac atgggcggga caaggctgat tacatgtcag attgagaaag agccctataa
     1201 gagagacttt aaatatgttg atgctacttg acccaagcat aaaagcaaag aagaatttat
     1261 gaatagtgaa gaagtttcaa agttactatc aggatagtaa gaatcattgc tatgtacagt
     1321 gtacataatt tttctctaat atagcgagtt gaaaggcttt ctctaaagcg tacatagagc
     1381 ggctaaacat ggttgtgtct gttagttatg tttatgctga tatatcactc aggtttttct
     1441 gctgctggtt tttatagata gcataatggg tgggtcaggt gggttttaca aggtcaaaat
     1501 aatctaactt gtgactatat aaaacgtggt tcgttaaccc atcttcaatc ttttgtccat
     1561 tcatggtaat tgaatatttg taaccaatta caaatattta tatttatttt aattatttta
     1621 aaacaggtat agattcataa ttattttaag agaggagata aagtgagata accttagcct
     1681 tttggtgttg actgcaaata atctgaactg actatgatta cctactttct aatcatttgc
     1741 atatggtttt gaaaggtttc aaccatggcg acaagagaat tctttaccaa aaaggaacat
     1801 tttcctggat ttgaatgggc ttttttttaa tggtttttaa tttaatgcca atatcctgct
     1861 caagtatgaa aatttatggt tttagttata taatgggtgt taatttattg tgttttgctt
     1921 aagttgtttt tggatattgt aggtttgggc ttaagtcaga agctaaagtt gccacaagag
     1981 gagcattaaa gtcgccatgg tgggctttag gttgtgcaaa tcaggttgtg gttagcattc
     2041 ttttttgaaa gcttaaccca aagttgtagt ccatgaggtt tgaacttggg ccctcactaa
     2101 aattagttag tagttcaaaa ggttagcact attgttactt gttagtagcc tcttactaac
     2161 ttttttatac caatcaacct acaaaaccat taagaacttc aaatatgata tatgttgatt
     2221 attattcaaa ccttgccttt ttatatttta cttagattta tttgcaaagt aaccattatt
     2281 gttgaaatgc aagactacta agatggattc cagttgttaa ctaacatgcc tacgacctaa
     2341 aagttcacaa ccaacactga acataaaaga gtagtgatgt acagtttagc caagattgat
     2401 ttttataatt acgggagtca tgagctacaa tgaagccaaa agaaggttaa atgttacagg
     2461 tggaatagat attacaaggt tcaaattctt tgttcttttt tgcaccttta ttttttcaag
     2521 tgaactttca ttgtcattgg tggtatcagt ttgtaagttt gcaatggaat ccttattact
     2581 aagggttgct gaaatagttg ctcttggtaa aggactatac atatttcatt gcatatgtgt
     2641 gtaaagaatg tcttaattgg gctcgtgtat tctttaaatt atatttccca agtaattgaa
     2701 aatgtgtgta aagaa
//
LOCUS       XM_071830465            2778 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X18, mRNA.
ACCESSION   XM_071830465
VERSION     XM_071830465.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2778
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             594..953
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071686566.1"
                     /db_xref="GeneID:139840222"
                     /translation="MISPLEGRTFNVVESGDPNTTEWISLKAAREVKTLIDKFTKPEA
                     YVVDDLNHLKRTARQGKIVVRRNVSRICDKDGWFQHCCKKCQKGSRDVSGQRGSCFLS
                     VLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggtagt ctaaagttca agcgggtgaa
      361 ccttcatgta aattcaccat aggtgtcaaa atagacggga tgatgaatca tacatataat
      421 ctgttcttct gcgtttcgat ggtcaaccag atgtggatga agaggtatgt agctagatga
      481 ttgatagtca aacgatgtgc atatggaagt tgaaatgaaa agagttactt gtatagttct
      541 tagattaata cggcaatttt ttagctataa gagtggacgt gcacttgaag tacatgatat
      601 ctcccttaga aggaaggact ttcaatgttg tcgaaagtgg tgaccctaac acaacagagt
      661 ggatatcact aaaagctgcg agagaagtga aaacattgat tgacaagttt acaaagcccg
      721 aagcgtatgt tgtcgacgat cttaatcatt taaagaggac ggccagacaa ggtaaaattg
      781 tggttcgtcg aaatgtcagt agaatttgtg ataaagatgg ttggttccag cattgctgca
      841 aaaaatgtca gaaaggtagt agagatgtca gtggacaaag aggaagttgt tttttgagtg
      901 tcctaactgt aaaactgaag ctgaaatatg aaatatctgc caaactctat taacatgatt
      961 cgtgttacca tctgcattct tgataagact ggatattgtg aattgattct actcagctat
     1021 tgaaattgac tgctaaaagc accacctggc tgaatgcgct tgcacctact tgtgttatcc
     1081 acgggatatc ccttaggagc tgtacgatgt catacataaa aactttgttt tcataatcca
     1141 gctgtctact ttcaacctta acatcaataa tgatgggttc actgttgtta atgtgactga
     1201 tgaaggtgac aacatgggcg ggacaaggct gattacatgt cagattgaga aagagcccta
     1261 taagagagac tttaaatatg ttgatgctac ttgacccaag cataaaagca aagaagaatt
     1321 tatgaatagt gaagaagttt caaagttact atcaggatag taagaatcat tgctatgtac
     1381 agtgtacata atttttctct aatatagcga gttgaaaggc tttctctaaa gcgtacatag
     1441 agcggctaaa catggttgtg tctgttagtt atgtttatgc tgatatatca ctcaggtttt
     1501 tctgctgctg gtttttatag atagcataat gggtgggtca ggtgggtttt acaaggtcaa
     1561 aataatctaa cttgtgacta tataaaacgt ggttcgttaa cccatcttca atcttttgtc
     1621 cattcatggt aattgaatat ttgtaaccaa ttacaaatat ttatatttat tttaattatt
     1681 ttaaaacagg tatagattca taattatttt aagagaggag ataaagtgag ataaccttag
     1741 ccttttggtg ttgactgcaa ataatctgaa ctgactatga ttacctactt tctaatcatt
     1801 tgcatatggt tttgaaaggt ttcaaccatg gcgacaagag aattctttac caaaaaggaa
     1861 cattttcctg gatttgaatg ggcttttttt taatggtttt taatttaatg ccaatatcct
     1921 gctcaagtat gaaaatttat ggttttagtt atataatggg tgttaattta ttgtgttttg
     1981 cttaagttgt ttttggatat tgtaggtttg ggcttaagtc agaagctaaa gttgccacaa
     2041 gaggagcatt aaagtcgcca tggtgggctt taggttgtgc aaatcaggtt gtggttagca
     2101 ttcttttttg aaagcttaac ccaaagttgt agtccatgag gtttgaactt gggccctcac
     2161 taaaattagt tagtagttca aaaggttagc actattgtta cttgttagta gcctcttact
     2221 aactttttta taccaatcaa cctacaaaac cattaagaac ttcaaatatg atatatgttg
     2281 attattattc aaaccttgcc tttttatatt ttacttagat ttatttgcaa agtaaccatt
     2341 attgttgaaa tgcaagacta ctaagatgga ttccagttgt taactaacat gcctacgacc
     2401 taaaagttca caaccaacac tgaacataaa agagtagtga tgtacagttt agccaagatt
     2461 gatttttata attacgggag tcatgagcta caatgaagcc aaaagaaggt taaatgttac
     2521 aggtggaata gatattacaa ggttcaaatt ctttgttctt ttttgcacct ttattttttc
     2581 aagtgaactt tcattgtcat tggtggtatc agtttgtaag tttgcaatgg aatccttatt
     2641 actaagggtt gctgaaatag ttgctcttgg taaaggacta tacatatttc attgcatatg
     2701 tgtgtaaaga atgtcttaat tgggctcgtg tattctttaa attatatttc ccaagtaatt
     2761 gaaaatgtgt gtaaagaa
//
LOCUS       XM_071830467            2643 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X19, mRNA.
ACCESSION   XM_071830467
VERSION     XM_071830467.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2643
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             459..818
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071686568.1"
                     /db_xref="GeneID:139840222"
                     /translation="MISPLEGRTFNVVESGDPNTTEWISLKAAREVKTLIDKFTKPEA
                     YVVDDLNHLKRTARQGKIVVRRNVSRICDKDGWFQHCCKKCQKGSRDVSGQRGSCFLS
                     VLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga gttcttagat taatacggca
      421 attttttagc tataagagtg gacgtgcact tgaagtacat gatatctccc ttagaaggaa
      481 ggactttcaa tgttgtcgaa agtggtgacc ctaacacaac agagtggata tcactaaaag
      541 ctgcgagaga agtgaaaaca ttgattgaca agtttacaaa gcccgaagcg tatgttgtcg
      601 acgatcttaa tcatttaaag aggacggcca gacaaggtaa aattgtggtt cgtcgaaatg
      661 tcagtagaat ttgtgataaa gatggttggt tccagcattg ctgcaaaaaa tgtcagaaag
      721 gtagtagaga tgtcagtgga caaagaggaa gttgtttttt gagtgtccta actgtaaaac
      781 tgaagctgaa atatgaaata tctgccaaac tctattaaca tgattcgtgt taccatctgc
      841 attcttgata agactggata ttgtgaattg attctactca gctattgaaa ttgactgcta
      901 aaagcaccac ctggctgaat gcgcttgcac ctacttgtgt tatccacggg atatccctta
      961 ggagctgtac gatgtcatac ataaaaactt tgttttcata atccagctgt ctactttcaa
     1021 ccttaacatc aataatgatg ggttcactgt tgttaatgtg actgatgaag gtgacaacat
     1081 gggcgggaca aggctgatta catgtcagat tgagaaagag ccctataaga gagactttaa
     1141 atatgttgat gctacttgac ccaagcataa aagcaaagaa gaatttatga atagtgaaga
     1201 agtttcaaag ttactatcag gatagtaaga atcattgcta tgtacagtgt acataatttt
     1261 tctctaatat agcgagttga aaggctttct ctaaagcgta catagagcgg ctaaacatgg
     1321 ttgtgtctgt tagttatgtt tatgctgata tatcactcag gtttttctgc tgctggtttt
     1381 tatagatagc ataatgggtg ggtcaggtgg gttttacaag gtcaaaataa tctaacttgt
     1441 gactatataa aacgtggttc gttaacccat cttcaatctt ttgtccattc atggtaattg
     1501 aatatttgta accaattaca aatatttata tttattttaa ttattttaaa acaggtatag
     1561 attcataatt attttaagag aggagataaa gtgagataac cttagccttt tggtgttgac
     1621 tgcaaataat ctgaactgac tatgattacc tactttctaa tcatttgcat atggttttga
     1681 aaggtttcaa ccatggcgac aagagaattc tttaccaaaa aggaacattt tcctggattt
     1741 gaatgggctt ttttttaatg gtttttaatt taatgccaat atcctgctca agtatgaaaa
     1801 tttatggttt tagttatata atgggtgtta atttattgtg ttttgcttaa gttgtttttg
     1861 gatattgtag gtttgggctt aagtcagaag ctaaagttgc cacaagagga gcattaaagt
     1921 cgccatggtg ggctttaggt tgtgcaaatc aggttgtggt tagcattctt ttttgaaagc
     1981 ttaacccaaa gttgtagtcc atgaggtttg aacttgggcc ctcactaaaa ttagttagta
     2041 gttcaaaagg ttagcactat tgttacttgt tagtagcctc ttactaactt ttttatacca
     2101 atcaacctac aaaaccatta agaacttcaa atatgatata tgttgattat tattcaaacc
     2161 ttgccttttt atattttact tagatttatt tgcaaagtaa ccattattgt tgaaatgcaa
     2221 gactactaag atggattcca gttgttaact aacatgccta cgacctaaaa gttcacaacc
     2281 aacactgaac ataaaagagt agtgatgtac agtttagcca agattgattt ttataattac
     2341 gggagtcatg agctacaatg aagccaaaag aaggttaaat gttacaggtg gaatagatat
     2401 tacaaggttc aaattctttg ttcttttttg cacctttatt ttttcaagtg aactttcatt
     2461 gtcattggtg gtatcagttt gtaagtttgc aatggaatcc ttattactaa gggttgctga
     2521 aatagttgct cttggtaaag gactatacat atttcattgc atatgtgtgt aaagaatgtc
     2581 ttaattgggc tcgtgtattc tttaaattat atttcccaag taattgaaaa tgtgtgtaaa
     2641 gaa
//
LOCUS       XM_071830468            2615 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X20, mRNA.
ACCESSION   XM_071830468
VERSION     XM_071830468.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2615
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             431..790
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071686569.1"
                     /db_xref="GeneID:139840222"
                     /translation="MISPLEGRTFNVVESGDPNTTEWISLKAAREVKTLIDKFTKPEA
                     YVVDDLNHLKRTARQGKIVVRRNVSRICDKDGWFQHCCKKCQKGSRDVSGQRGSCFLS
                     VLTVKLKLKYEISAKLY"
ORIGIN      
        1 ttcaatttca ggagccctaa tctggtttct ctcttcaaaa acatactgtt tattcttttc
       61 ttctctacat catcgataca accaaaatac catcgccttc atacgaaaac gacggaaatc
      121 aaatcccaca atcaagtttg cataatcgcg ggtgagatct cttgaaataa tacttcgatt
      181 aataggtgcg tatttcatca gggttggctg atttcatcag cgactcacaa aattaattag
      241 ggttctttga ttccatcagc atgttgcgaa aattttgata gcagaaatat ggaatcagtc
      301 caaatccgat atagtgaaga gatttacgca ttcaggatga tgaatcatac atataatctg
      361 ttcttctgcg tttcgatggt caaccagatg tggatgaaga gctataagag tggacgtgca
      421 cttgaagtac atgatatctc ccttagaagg aaggactttc aatgttgtcg aaagtggtga
      481 ccctaacaca acagagtgga tatcactaaa agctgcgaga gaagtgaaaa cattgattga
      541 caagtttaca aagcccgaag cgtatgttgt cgacgatctt aatcatttaa agaggacggc
      601 cagacaaggt aaaattgtgg ttcgtcgaaa tgtcagtaga atttgtgata aagatggttg
      661 gttccagcat tgctgcaaaa aatgtcagaa aggtagtaga gatgtcagtg gacaaagagg
      721 aagttgtttt ttgagtgtcc taactgtaaa actgaagctg aaatatgaaa tatctgccaa
      781 actctattaa catgattcgt gttaccatct gcattcttga taagactgga tattgtgaat
      841 tgattctact cagctattga aattgactgc taaaagcacc acctggctga atgcgcttgc
      901 acctacttgt gttatccacg ggatatccct taggagctgt acgatgtcat acataaaaac
      961 tttgttttca taatccagct gtctactttc aaccttaaca tcaataatga tgggttcact
     1021 gttgttaatg tgactgatga aggtgacaac atgggcggga caaggctgat tacatgtcag
     1081 attgagaaag agccctataa gagagacttt aaatatgttg atgctacttg acccaagcat
     1141 aaaagcaaag aagaatttat gaatagtgaa gaagtttcaa agttactatc aggatagtaa
     1201 gaatcattgc tatgtacagt gtacataatt tttctctaat atagcgagtt gaaaggcttt
     1261 ctctaaagcg tacatagagc ggctaaacat ggttgtgtct gttagttatg tttatgctga
     1321 tatatcactc aggtttttct gctgctggtt tttatagata gcataatggg tgggtcaggt
     1381 gggttttaca aggtcaaaat aatctaactt gtgactatat aaaacgtggt tcgttaaccc
     1441 atcttcaatc ttttgtccat tcatggtaat tgaatatttg taaccaatta caaatattta
     1501 tatttatttt aattatttta aaacaggtat agattcataa ttattttaag agaggagata
     1561 aagtgagata accttagcct tttggtgttg actgcaaata atctgaactg actatgatta
     1621 cctactttct aatcatttgc atatggtttt gaaaggtttc aaccatggcg acaagagaat
     1681 tctttaccaa aaaggaacat tttcctggat ttgaatgggc ttttttttaa tggtttttaa
     1741 tttaatgcca atatcctgct caagtatgaa aatttatggt tttagttata taatgggtgt
     1801 taatttattg tgttttgctt aagttgtttt tggatattgt aggtttgggc ttaagtcaga
     1861 agctaaagtt gccacaagag gagcattaaa gtcgccatgg tgggctttag gttgtgcaaa
     1921 tcaggttgtg gttagcattc ttttttgaaa gcttaaccca aagttgtagt ccatgaggtt
     1981 tgaacttggg ccctcactaa aattagttag tagttcaaaa ggttagcact attgttactt
     2041 gttagtagcc tcttactaac ttttttatac caatcaacct acaaaaccat taagaacttc
     2101 aaatatgata tatgttgatt attattcaaa ccttgccttt ttatatttta cttagattta
     2161 tttgcaaagt aaccattatt gttgaaatgc aagactacta agatggattc cagttgttaa
     2221 ctaacatgcc tacgacctaa aagttcacaa ccaacactga acataaaaga gtagtgatgt
     2281 acagtttagc caagattgat ttttataatt acgggagtca tgagctacaa tgaagccaaa
     2341 agaaggttaa atgttacagg tggaatagat attacaaggt tcaaattctt tgttcttttt
     2401 tgcaccttta ttttttcaag tgaactttca ttgtcattgg tggtatcagt ttgtaagttt
     2461 gcaatggaat ccttattact aagggttgct gaaatagttg ctcttggtaa aggactatac
     2521 atatttcatt gcatatgtgt gtaaagaatg tcttaattgg gctcgtgtat tctttaaatt
     2581 atatttccca agtaattgaa aatgtgtgta aagaa
//
LOCUS       XM_071830469            2397 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840222), transcript variant X21, mRNA.
ACCESSION   XM_071830469
VERSION     XM_071830469.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2397
                     /gene="LOC139840222"
                     /note="uncharacterized LOC139840222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840222"
     CDS             213..572
                     /gene="LOC139840222"
                     /codon_start=1
                     /product="uncharacterized protein isoform X4"
                     /protein_id="XP_071686570.1"
                     /db_xref="GeneID:139840222"
                     /translation="MISPLEGRTFNVVESGDPNTTEWISLKAAREVKTLIDKFTKPEA
                     YVVDDLNHLKRTARQGKIVVRRNVSRICDKDGWFQHCCKKCQKGSRDVSGQRGSCFLS
                     VLTVKLKLKYEISAKLY"
ORIGIN      
        1 tttactgttg agcgcaggat gatgaatcat acatataatc tgttcttctg cgtttcgatg
       61 gtcaaccaga tgtggatgaa gaggtatgta gctagatgat tgatagtcaa acgatgtgca
      121 tatggaagtt gaaatgaaaa gagttacttg tatagttctt agattaatac ggcaattttt
      181 tagctataag agtggacgtg cacttgaagt acatgatatc tcccttagaa ggaaggactt
      241 tcaatgttgt cgaaagtggt gaccctaaca caacagagtg gatatcacta aaagctgcga
      301 gagaagtgaa aacattgatt gacaagttta caaagcccga agcgtatgtt gtcgacgatc
      361 ttaatcattt aaagaggacg gccagacaag gtaaaattgt ggttcgtcga aatgtcagta
      421 gaatttgtga taaagatggt tggttccagc attgctgcaa aaaatgtcag aaaggtagta
      481 gagatgtcag tggacaaaga ggaagttgtt ttttgagtgt cctaactgta aaactgaagc
      541 tgaaatatga aatatctgcc aaactctatt aacatgattc gtgttaccat ctgcattctt
      601 gataagactg gatattgtga attgattcta ctcagctatt gaaattgact gctaaaagca
      661 ccacctggct gaatgcgctt gcacctactt gtgttatcca cgggatatcc cttaggagct
      721 gtacgatgtc atacataaaa actttgtttt cataatccag ctgtctactt tcaaccttaa
      781 catcaataat gatgggttca ctgttgttaa tgtgactgat gaaggtgaca acatgggcgg
      841 gacaaggctg attacatgtc agattgagaa agagccctat aagagagact ttaaatatgt
      901 tgatgctact tgacccaagc ataaaagcaa agaagaattt atgaatagtg aagaagtttc
      961 aaagttacta tcaggatagt aagaatcatt gctatgtaca gtgtacataa tttttctcta
     1021 atatagcgag ttgaaaggct ttctctaaag cgtacataga gcggctaaac atggttgtgt
     1081 ctgttagtta tgtttatgct gatatatcac tcaggttttt ctgctgctgg tttttataga
     1141 tagcataatg ggtgggtcag gtgggtttta caaggtcaaa ataatctaac ttgtgactat
     1201 ataaaacgtg gttcgttaac ccatcttcaa tcttttgtcc attcatggta attgaatatt
     1261 tgtaaccaat tacaaatatt tatatttatt ttaattattt taaaacaggt atagattcat
     1321 aattatttta agagaggaga taaagtgaga taaccttagc cttttggtgt tgactgcaaa
     1381 taatctgaac tgactatgat tacctacttt ctaatcattt gcatatggtt ttgaaaggtt
     1441 tcaaccatgg cgacaagaga attctttacc aaaaaggaac attttcctgg atttgaatgg
     1501 gctttttttt aatggttttt aatttaatgc caatatcctg ctcaagtatg aaaatttatg
     1561 gttttagtta tataatgggt gttaatttat tgtgttttgc ttaagttgtt tttggatatt
     1621 gtaggtttgg gcttaagtca gaagctaaag ttgccacaag aggagcatta aagtcgccat
     1681 ggtgggcttt aggttgtgca aatcaggttg tggttagcat tcttttttga aagcttaacc
     1741 caaagttgta gtccatgagg tttgaacttg ggccctcact aaaattagtt agtagttcaa
     1801 aaggttagca ctattgttac ttgttagtag cctcttacta acttttttat accaatcaac
     1861 ctacaaaacc attaagaact tcaaatatga tatatgttga ttattattca aaccttgcct
     1921 ttttatattt tacttagatt tatttgcaaa gtaaccatta ttgttgaaat gcaagactac
     1981 taagatggat tccagttgtt aactaacatg cctacgacct aaaagttcac aaccaacact
     2041 gaacataaaa gagtagtgat gtacagttta gccaagattg atttttataa ttacgggagt
     2101 catgagctac aatgaagcca aaagaaggtt aaatgttaca ggtggaatag atattacaag
     2161 gttcaaattc tttgttcttt tttgcacctt tattttttca agtgaacttt cattgtcatt
     2221 ggtggtatca gtttgtaagt ttgcaatgga atccttatta ctaagggttg ctgaaatagt
     2281 tgctcttggt aaaggactat acatatttca ttgcatatgt gtgtaaagaa tgtcttaatt
     2341 gggctcgtgt attctttaaa ttatatttcc caagtaattg aaaatgtgtg taaagaa
//
LOCUS       XM_071830470            1194 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-binding protein
            CBP-like (LOC139840224), mRNA.
ACCESSION   XM_071830470
VERSION     XM_071830470.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1194
                     /gene="LOC139840224"
                     /note="calcium-binding protein CBP-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139840224"
     CDS             87..1022
                     /gene="LOC139840224"
                     /codon_start=1
                     /product="calcium-binding protein CBP-like"
                     /protein_id="XP_071686571.1"
                     /db_xref="GeneID:139840224"
                     /translation="MSGYPHYPSGYGGPPTSQPYGAPAQPYGAPAQPYGAPAANPYGA
                     PAQPYGQPPHGQPNQSPYAPVASPYGAPAASPYSAPSAPYGAPEPQTKPPKDHNKPSS
                     AAAGSPYGAPQPGGGYPHAPGSYGSPFSALLPSTFPPGTDPNVVACFQVADQDGSGVI
                     DDKELQRALSSYNQSFSIRTVHLLMYLFTNTNTRKIGPKEFTQVFYSLQNWRANFEKF
                     DRDRSGKIDTNELREALLSLGFAVSPVVLDLLVSKFDKSGGKNKAIEYDNFIECCLTV
                     KGLTEKFKEKDTSYSGSATFTYEAFMLTVLPFLIA"
     misc_feature    <108..>512
                     /gene="LOC139840224"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated; Region: PRK07764"
                     /db_xref="CDD:236090"
     misc_feature    516..1010
                     /gene="LOC139840224"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     Group I PEF proteins; Region: EFh_PEF_Group_I; cd16180"
                     /db_xref="CDD:320055"
     misc_feature    516..605
                     /gene="LOC139840224"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
     misc_feature    order(543..545,549..551,555..557,576..578,741..743,
                     747..749,753..755,774..776,945..947,951..953,957..959)
                     /gene="LOC139840224"
                     /note="Ca binding site [ion binding]; other site"
                     /db_xref="CDD:320055"
     misc_feature    624..713
                     /gene="LOC139840224"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
     misc_feature    714..803
                     /gene="LOC139840224"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
     misc_feature    order(822..824,831..836,843..845,912..914,921..926,
                     930..935,960..983,987..992,999..1004)
                     /gene="LOC139840224"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:320055"
     misc_feature    822..917
                     /gene="LOC139840224"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
     misc_feature    918..1010
                     /gene="LOC139840224"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
ORIGIN      
        1 aatatactcg ttcatcatac catcatcttc acatcacaaa tcacaataaa ttagcctctg
       61 aaaaacaatt actccgtata gattaaatgt ctggataccc ccattaccct tccggctacg
      121 gtggaccacc tacatctcaa ccttacggtg cacctgcaca accctacggt gcaccagcac
      181 aaccttatgg cgcacccgca gctaatcctt acggtgcacc tgcacaaccc tacggtcaac
      241 caccacacgg tcaaccaaat caatcacctt acgcacctgt agccagtccg tacggtgcac
      301 cagcagctag cccttacagt gcaccctcag caccttacgg tgcacccgaa cctcaaacta
      361 aaccaccaaa ggatcataat aaaccgtcgt cagctgccgc tggttctccc tacggtgctc
      421 ctcagcctgg tggtggatat ccacatgcgc cgggatcgta cggaagtccg ttttcggcgt
      481 tgttgccgtc gacgttcccg ccgggaacag atcctaacgt tgttgcgtgt tttcaggtgg
      541 cggatcagga cggaagtggt gtgatcgacg ataaggaatt gcagagagcg ttatcttcgt
      601 ataatcaaag ttttagcatc cgtactgttc atcttcttat gtatctcttc accaatacaa
      661 acactagaaa aattggacct aaggaattca ctcaagtttt ctacagttta cagaactgga
      721 gggctaactt tgagaaattt gatagagatc gtagtggcaa gattgataca aatgaattga
      781 gagaggccct attgagccta ggctttgcag tttcacctgt ggttttggat ttgttggttt
      841 ccaagttcga caagtctggt ggaaagaaca aggctattga atatgacaat ttcatcgagt
      901 gctgcttgac tgttaagggg ctaaccgaaa agttcaagga gaaggacact tcatactcag
      961 ggagtgctac atttacgtat gaggcgttca tgttgactgt tttgccattc ctcattgctt
     1021 agggtttata tcaactatct cttttagctt ggttatctca tgagtagagg aaaaggattt
     1081 cttaactttg atttattttc ggttgattaa cttctgtatg ttttcttaac gtttcttgaa
     1141 atttttatgt gaatcttttg gtcattaata aaataaaatg ctgtcaactt gtca
//
LOCUS       XM_071830471            2095 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like
            (LOC139840225), mRNA.
ACCESSION   XM_071830471
VERSION     XM_071830471.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2095
                     /gene="LOC139840225"
                     /note="peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine
                     amidase A-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840225"
     CDS             137..1945
                     /gene="LOC139840225"
                     /codon_start=1
                     /product="peptide-N4-(N-acetyl-beta-
                     glucosaminyl)asparagine amidase A-like"
                     /protein_id="XP_071686572.1"
                     /db_xref="GeneID:139840225"
                     /translation="MISITDLIIFTLLFFTNQIHSSQPSHFIKSITKKRITNNDVTPQ
                     QYFQVTHPLPTDNLTPSCTVSVLNHSFGNTYNLPPVTVPYTPPPSTCQWSHAVLEFQA
                     ASSGEQYDRIAGIWIDGIELLRTSTAQPTENGIFWNVRKDISKYSSVITKSNLTVSVM
                     LENLINDVFTGVYHVNVSFIFYSVNAVKLPLSGELEGHSLNRKLITVKKNHDKENKLG
                     FDKASESSCPYLRPADLIVPISFSNGIDEGFWFRIQNEFDVKMTNVEISERTYRAVLE
                     LYVSFHGDDEFWYMNPPDSYVKMNQLSTGRAHGAYREIMVTIDGRLVGSVVPFPVIFT
                     GGINPLFWEPVVSIGAFNLPSYDIDLTPFLGLLLDNKSHTIGIQIVDGISFWLVDANL
                     HLWLDESDVKAETITSKVPEVEMERENEFEGLDGEFEIEGEQTSEVTGWVNSSIGNLK
                     TVLTEKIKIKNKLKFKNDGTKKELNHKYKRKTKIRITNDLGELIDSLDVKIEYPLKVE
                     IETIPGSEKDTYVMNTKVEQEMTEKFDGVKVSSVLSHKQNCTGSMLVKGNEVLSGSAI
                     NRQNYSYHDGLGCYYRKVDVVDGEVLSDESSSNCID"
     misc_feature    290..1651
                     /gene="LOC139840225"
                     /note="Peptide N-acetyl-beta-D-glucosaminyl asparaginase
                     amidase A; Region: PNGaseA; pfam12222"
                     /db_xref="CDD:403439"
ORIGIN      
        1 tttagatcac atctatctat ttttagtgat ggtagaaaaa gtcgaaccca tattaacaga
       61 ggatatatac tatgaacttc atagtttata cttgtagttt taacaaaaaa aaaaaatcta
      121 aaaatagaag gtaagcatga taagcatcac cgatctcatt atctttaccc tcctgttctt
      181 cacaaatcaa atccattcat cacaaccttc acatttcatc aaatcaataa ctaaaaaacg
      241 tataacgaat aatgacgtca caccacaaca gtatttccag gtcactcatc cacttcccac
      301 cgacaacctc actccgtcat gcaccgtctc cgtactcaac cacagcttcg gtaacaccta
      361 caaccttcca cctgtcaccg tcccctacac tccgccacct tccacgtgtc aatggtccca
      421 cgcagtcctc gaatttcagg ccgcatcttc cggcgaacag tacgaccgta tcgccggaat
      481 atggatcgac ggtatagagc tgctacgtac aagtacagct caaccgactg agaacggtat
      541 cttctggaat gttcgaaagg atattagtaa gtattcttcg gttattacta aaagcaatct
      601 cactgtttct gttatgcttg aaaacctaat taacgatgtg tttaccggcg tttatcatgt
      661 taatgtatcg tttatatttt actccgttaa cgccgtcaaa cttccgttat ctggagaact
      721 ggaaggtcat tcgttgaata ggaaattaat tactgttaag aagaatcatg ataaggaaaa
      781 taagctaggg tttgataaag cgtctgaatc atcgtgtccg tatctcagac ctgcggatct
      841 gattgtaccg atatcgtttt ctaatggtat tgatgagggt ttctggtttc gaattcaaaa
      901 tgaatttgat gtgaaaatga ccaatgttga gatttcagaa cgaacatata gagcggtgct
      961 tgaattgtat gtttcgtttc atggagatga cgagttttgg tacatgaatc cgccggattc
     1021 gtacgtgaag atgaatcagt tgtcgacagg aagagctcac ggagcatatc gtgagattat
     1081 ggtgacgatt gatgggagat tggtgggatc ggtggttcct tttccggtga tattcacagg
     1141 cgggattaat ccgttgtttt gggaacctgt tgtgtcgatt ggagcgttta atcttccttc
     1201 ttatgatatc gatttgacgc cttttttagg gcttcttttg gataataaga gtcataccat
     1261 cgggattcag attgttgatg gtatttcgtt ttggcttgtg gatgctaatt tgcatttgtg
     1321 gttggatgaa tcggatgtga aagcggaaac tataacatct aaagttccag aagtggagat
     1381 ggaacgtgag aatgagtttg aaggtttaga tggtgaattt gaaatagaag gtgaacagac
     1441 aagtgaagtt acggggtggg ttaattcaag catagggaat cttaaaaccg tacttactga
     1501 aaagatcaag attaagaaca aactcaagtt taaaaacgac ggtactaaga aagaactgaa
     1561 tcataagtac aaaaggaaaa caaaaataag gatcacaaat gacttgggtg agttgattga
     1621 tagtctagat gtaaaaattg agtatccatt gaaggtcgaa attgaaacta tacctggatc
     1681 agagaaagat acttatgtga tgaacacgaa agtggagcaa gaaatgactg aaaagtttga
     1741 tggtgttaaa gtttcaagtg ttttgagtca taaacagaat tgtactggtt cgatgctggt
     1801 gaaggggaat gaagtgcttt cgggttcagc aattaaccgt caaaattaca gttaccatga
     1861 tggattgggt tgttattatc gaaaggttga tgtggtggat ggtgaagttc tttcggatga
     1921 atcaagctca aattgtattg attagttctt tttccacgag tttagtagta gagtttcact
     1981 gttatggtta gtgtaattgt gtaagggtta tgtttgactg atatgtcttt tgacatgaat
     2041 aactagctgt tctctcagct ttagctattt aattcaaata aaactttaca ttggt
//
LOCUS       XR_011757283            1058 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840226), ncRNA.
ACCESSION   XR_011757283
VERSION     XR_011757283.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1058
                     /gene="LOC139840226"
                     /note="uncharacterized LOC139840226; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840226"
     ncRNA           1..1058
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840226"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840226"
ORIGIN      
        1 cttatagatg atggttgtat gcagttgaat ttgttacgcg ttgtatgatt caatttgttt
       61 cagaaggtag tatgcaactg ctctgcgtag tatgttctta cctacaaatg atgatgacgt
      121 gttttttgtt tgataatgtg ttatgcaata tctaatagtc ttttccactt ccttttattt
      181 aggcattata attatattgt ttccggttta ttcatcctgt tgaggtaatc atttatgtca
      241 cttgctattg tttgaaattt ctcgaatgcc tgtaagtata attagcttgc cttcttcgaa
      301 ttccggctcc tttattgttc ctgccatgga ttctgttacg aatatttcgg gtaatgaggt
      361 ttactgaagt tctatattac tgcgttatat ttagttgtgt tttgcttata atgttgtcca
      421 ttgcttgcgg cagtgactac tactgggttt attgcggtac aggcatcctg ctgtttacga
      481 gcttcattta ctcagcaaac atatgaaata tcagcagtgg cagctgctac tgtgccggtt
      541 gttcagcctg ttctattgat gatgttaacg tagtaggttc gcaagtatca gttattgcca
      601 atacacgaaa cacgtcgact ttggccactg tacgtacata cgtcaaagga aatcagccaa
      661 aaacatgttt acgctgtcgc aatcgtatgg gcattgttcc tgtttggcgg tcatctgctt
      721 ttgcggatac atctttttgc cggtatatct gacaatcctg tcggtgtagg tccatcgatt
      781 tcagttttca acagcgatat agcatcgaca tctactgtct gccattcgag cacttgatca
      841 tttatcactt cgtttttcat gctgggatta taaggaatga agttgttgct actacaagat
      901 tgttttctca ggtattccgc tgttgagaaa cataaacatt aaaaaaccca gcagctcaca
      961 cagctactac tgtaactgtc gtgctgctcc ttcaactttt caattgctac aatgcacaat
     1021 gttatctatg ctcacttact aaactgcact cgcacaca
//
LOCUS       XM_071830472            1773 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calmodulin calcium-dependent
            NAD kinase (LOC139840227), mRNA.
ACCESSION   XM_071830472
VERSION     XM_071830472.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1773
                     /gene="LOC139840227"
                     /note="calmodulin calcium-dependent NAD kinase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840227"
     CDS             97..1641
                     /gene="LOC139840227"
                     /codon_start=1
                     /product="calmodulin calcium-dependent NAD kinase"
                     /protein_id="XP_071686573.1"
                     /db_xref="GeneID:139840227"
                     /translation="MQKGGYSKLVVTHILAASTVGIIYTAVMRHRRRKNSKSFKVDDV
                     VVPRLDVTGSGHVGRLEKFSHYVARQFGFKDGNECPELSKLASDYVRNSKGFEDSMYV
                     YFSNETEVESLCEKLVQELERCILAYFAFHWNQADHMINQVLSIGSEARKLKNMVLTA
                     TRKQRFDRVTKDLKVTRAFSTMVEEMKVIGGTPKKGDGNDTLTEVMGPVAHCDRSPVL
                     LFMGGGMGAGKSTVLKEILKEAFWSEAAASAVVVEADAFKETDVIYRALSSKGHHNDM
                     LQTAELVHQTSTDAASSLLVTALNDGRDVIMDGTLAWEPFVQQTIAMARSVHKHRYRM
                     GVGYKVLEDGTINENYWEKVEDEEDEFVVKKPYRIELVGVVCDPFLAVTRGIRRAIAV
                     KRAVRVNSQLKSHKRFANAFPRYCHLVDNAKLYCTNGIGIPPKLIGWKDGNNNLLVDR
                     DEIKCLESLSEINDEADSIYELYADPKMLTDSDSVWNKLVLTPTRTDLQRDLKIVIEK
                     IEKSKL"
     misc_feature    733..>1032
                     /gene="LOC139840227"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 tatattatat tactcattta ttactatctc aacaccattt tccggccatt cttttctttc
       61 tttattttcc ggtcactgtt ttttaacaac gtaattatgc aaaaaggtgg gtacagtaag
      121 cttgtggtga cccacatcct tgctgcaagt actgtcggca tcatctacac cgcggtcatg
      181 agacaccgcc gtcgcaagaa ctcgaaatca tttaaggttg atgacgttgt tgttccacgg
      241 ctagatgtca ccggatccgg ccatgttgga aggcttgaaa agttttctca ttatgttgca
      301 agacaatttg gatttaaaga tggaaatgag tgtccagaat taagcaaatt ggcatccgat
      361 tatgtgagaa actcaaaagg gtttgaagat agtatgtatg tgtatttttc gaatgaaaca
      421 gaagtcgaat cactttgcga aaagcttgtt caagagcttg aaagatgtat tcttgcttat
      481 tttgcatttc attggaacca agccgatcat atgatcaatc aggtgctgag cattggatct
      541 gaggcgagga agcttaaaaa tatggtgttg acagctacga gaaagcaaag attcgataga
      601 gtcacaaagg atttaaaagt gacacgagca ttttcaacaa tggtggaaga aatgaaggtg
      661 atcggtggca ccccgaaaaa aggcgatggc aatgacacct tgacggaggt gatgggcccg
      721 gtcgctcatt gcgacagaag ccccgtcctc ctattcatgg gcggtggaat gggtgcagga
      781 aagagtaccg ttcttaaaga aatccttaaa gaagcatttt ggtcagaggc agccgcaagt
      841 gctgtggtgg tagaggccga tgctttcaag gagacagatg taatttaccg ggcgcttagc
      901 tcaaaaggtc accacaatga catgcttcaa accgctgaac tggtgcatca aacatctact
      961 gatgctgctt cgtctttatt ggtaacggct ttaaatgatg gaagagatgt gatcatggat
     1021 gggacattag cttgggaacc atttgtgcaa caaacaattg ccatggcaag aagtgttcat
     1081 aaacatcgtt atcgtatggg agttggctac aaggtcttag aagacggtac cattaacgag
     1141 aattactggg aaaaagtcga agacgaggaa gatgagtttg tagtcaagaa accttataga
     1201 attgagttgg ttggtgttgt ttgtgatcct tttcttgcag ttaccagggg aattaggagg
     1261 gcaatagcag tgaaaagagc agtgagggta aattcacaac tgaaatcaca caagagattt
     1321 gctaatgcat ttccaaggta ttgtcatctt gtggacaatg caaagctcta ttgcaccaat
     1381 ggcataggga ttcctccaaa gttgatcggg tggaaagacg gcaataataa tctattagtc
     1441 gatcgagatg agatcaaatg tttggaatca ctaagtgaaa tcaacgacga agcagattct
     1501 atatacgaac tttatgcaga ccccaagatg ttaacggatt ctgattcggt ttggaacaaa
     1561 cttgtattga cacctacacg aaccgatctt caacgtgatt tgaaaattgt gattgagaaa
     1621 attgaaaagt caaaattata acttgtgttc ccaaagtcga tcaaatttaa ttgtattttt
     1681 cacaataacg acttgtgtgt tgttttgtga attggttttc atcgttaatc tttacgtggt
     1741 gcttatgttc tgggacgcaa gtcatgtaat gat
//
LOCUS       XM_071830473            1033 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides proteasome subunit beta
            type-4-like (LOC139840228), mRNA.
ACCESSION   XM_071830473
VERSION     XM_071830473.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1033
                     /gene="LOC139840228"
                     /note="proteasome subunit beta type-4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840228"
     CDS             143..853
                     /gene="LOC139840228"
                     /codon_start=1
                     /product="proteasome subunit beta type-4-like"
                     /protein_id="XP_071686574.1"
                     /db_xref="GeneID:139840228"
                     /translation="MDTLLSSEGDSQRTQYPYVTGTSVIGIKYKDGILMAADMGGSYG
                     STIRYKSVERLKQIGKHTLLGASGEISDFQEILKYLDELVLHDNMWDDGNSLGPKEVH
                     NYLTRVMYNRRNKFDPLWNSLILGGVKNGHKYLGSVSMIGVHFEDDHVATGFGNHLAR
                     PILREEWREDLTFEEGVKLLEKCMRNLLYRDRSAVNKLQIAKITEEGMTISQPYSLKT
                     YWNFAAFQNPTVNAEGSW"
     misc_feature    200..781
                     /gene="LOC139840228"
                     /note="proteasome beta type-4 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; Region:
                     proteasome_beta_type_4; cd03760"
                     /db_xref="CDD:239729"
     misc_feature    order(206..208,254..256,260..262,302..304,602..604,
                     713..715,722..727)
                     /gene="LOC139840228"
                     /note="active site"
                     /db_xref="CDD:239729"
     misc_feature    order(260..262,269..271,275..292,350..352,356..358,
                     401..403,440..442,449..454,458..463,470..472,479..481,
                     557..559,563..565,569..580,587..589,611..616,620..625,
                     632..640,686..688,707..718,725..730)
                     /gene="LOC139840228"
                     /note="beta subunit interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:239729"
     polyA_site      1033
                     /gene="LOC139840228"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacaagttat acttcgtagt ttatacaaac taaggggaaa aaatcacctc attggattct
       61 tcttcacgaa ccctaagtcc aggacctgat ttgaaatctc gcaaattttt aggtcagaat
      121 ctgattataa tctcggaagg agatggatac tctattaagc tcagaaggag attcacaaag
      181 gactcagtat ccatatgtga cgggtacttc tgtcattggg atcaaataca aggatggtat
      241 tctcatggct gctgacatgg gaggttcata tggatccacc attcgctata agagtgtgga
      301 gcgattgaag caaattggca aacatacgct ccttggtgca agcggagaaa taagtgattt
      361 ccaagaaatt ttgaaatacc ttgatgaact cgtcttgcac gacaatatgt gggatgatgg
      421 gaactcactt ggtcctaaag aggtgcacaa ttatctaact cgggtcatgt acaatcgccg
      481 caacaagttt gatccgttat ggaattcact tatccttggt ggggtcaaaa atggccacaa
      541 gtatcttgga tcggtcagca tgattggtgt acattttgag gatgatcatg ttgctactgg
      601 attcggtaat cacctggccc gcccaattct tcgtgaagaa tggagggagg atttaacttt
      661 tgaagagggt gtaaaattat tggaaaaatg catgcgtaac cttctatatc gtgacaggtc
      721 tgctgtcaac aagcttcaga tagcaaagat aacagaggaa ggtatgacca tctcccagcc
      781 atactcatta aagacttact ggaattttgc tgcttttcaa aatccaacag tgaatgctga
      841 gggatcatgg tagacttctg agtttaaact actcggaaca tgttatcttg attgttttta
      901 atgttgtttg atgttatgcc atactaagtt tcagttgttt gatctctgtg ttgaacttaa
      961 ggatgttgag atcagattcc aagtatccta atatctatgt tttattgcac agttagacat
     1021 tgaacttctt caa
//
LOCUS       XM_071830474            1723 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TITAN-like protein
            (LOC139840230), transcript variant X1, mRNA.
ACCESSION   XM_071830474
VERSION     XM_071830474.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1723
                     /gene="LOC139840230"
                     /note="TITAN-like protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840230"
     CDS             78..1307
                     /gene="LOC139840230"
                     /codon_start=1
                     /product="TITAN-like protein isoform X1"
                     /protein_id="XP_071686575.1"
                     /db_xref="GeneID:139840230"
                     /translation="MKSPSNPNPNKRNSKKNNEFEFCKVCKLNHNLGRRHNYLPNHVK
                     SLSAFLSRFQSKISDVRFFIKNPSLLRPELASQNRFWCVFCDSDVTEPGSSFACERAI
                     NHLASADHLKNFKSFMWKYGGKMDRVDIFRVSDTDLAKYQKKCISMKSEDGNEQPGGA
                     LIGPSNDIHNELKFDYVDSFDRRHNFNFPNGVLPLQNHTNEKYQVSHSDMSRGAASSS
                     SSFDRKSLLLASDTKRLNNLGGNAGMNGLTGGYHHKGLGNTCQVYSEKSEFDMEGSSA
                     GLQKLTQISSKVSDTGNVHSGAPPPWFDATNGVHFDPVVKTVKSKLNPNRVGAAWAEK
                     RKLEMELESKGKLPVKSFDANWLPNFGRVWQSGTRKDSRKQFEEEVKKLPEEIQSDSS
                     LQLQPYISKRMRREDNG"
     misc_feature    141..1226
                     /gene="LOC139840230"
                     /note="Coiled coil protein 84; Region: CCDC84; pfam14968"
                     /db_xref="CDD:464412"
ORIGIN      
        1 ttctacttct cctaatctac ccctgaactg aaatctaaca atttgacgtt ttgattatcg
       61 tccaaacaat tggctcgatg aagtcaccat caaaccctaa ccctaataaa cgaaactcga
      121 agaagaataa cgaatttgag ttttgtaaag tatgtaagct gaatcacaat ctaggtcgtc
      181 gtcataatta cttaccgaat cacgttaaat ccttatcagc atttctatct cgatttcaat
      241 ctaagatatc tgacgtacgg ttttttatta agaaccctag cttacttcgt ccggagcttg
      301 cttctcaaaa taggttttgg tgcgtgtttt gcgattcaga tgttacggaa cccggtagtt
      361 cgtttgcttg tgagagagca atcaaccatc ttgcgagtgc ggatcacttg aaaaatttca
      421 aaagttttat gtggaaatac ggtggtaaaa tggaccgcgt tgacattttc cgggtttccg
      481 atacagatct tgctaagtat caaaagaagt gcatatcaat gaagagtgaa gatggtaatg
      541 aacaacctgg tggagcttta atcggccctt caaatgatat ccacaatgaa ctgaaatttg
      601 attatgtaga tagctttgac agacgtcata actttaattt tccaaatggt gttttacctt
      661 tacaaaatca tacaaatgag aaatatcagg tatcccattc agatatgtct agaggtgcag
      721 catctagcag ttcttcgttt gataggaaat cgttgctgct ggcttcggac acaaagcgtt
      781 taaataatct aggaggtaat gcaggcatga atgggctaac tggaggttat catcacaaag
      841 gactggggaa cacatgccag gtatattcag agaaaagtga atttgatatg gagggtagtt
      901 cagcaggttt gcagaagctg acacaaattt cttccaaagt atcggataca ggaaacgtgc
      961 attctggagc tccccctcct tggtttgatg caaccaatgg agttcatttt gacccggttg
     1021 ttaaaaccgt gaagtcaaaa ttaaacccta atagggttgg ggctgcatgg gcagaaaaaa
     1081 gaaaattaga gatggagttg gagagtaaag ggaagttgcc tgttaaaagt tttgatgcca
     1141 actggcttcc caactttggt agagtgtggc aatcaggaac caggaaggac tccaggaaac
     1201 aatttgagga ggaagttaag aaacttccgg aagaaatcca atctgattct tcattgcagt
     1261 tgcagcctta tataagcaag agaatgcgtc gggaagataa tggatgatgt atctgctcac
     1321 agcaagaaaa gagtcctgct aataacgtca aagcgtatgt tatcatggtg tctctgtatt
     1381 tccaccatac agtcgcatat ggattgtaag atgcaaaatc cgaagaattt agaattttga
     1441 cactaccatt tgctcggacc atttgctact gagaactgaa aaggaacact actgcattta
     1501 atgaagtaaa tatgccatgc tttccttgtt tgatttggtt attaagtact ggtccttatt
     1561 atgatttcta actcgaaaaa taattttgaa aataatatat taacatctgg tctggttaat
     1621 gctacttggc atagagtttt agtaaagaat gtaattcatt tgattttgtt attttttttc
     1681 ttctcactct caatgcttca aatagtagct cttttacctg aaa
//
LOCUS       XM_071830475            1708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TITAN-like protein
            (LOC139840230), transcript variant X2, mRNA.
ACCESSION   XM_071830475
VERSION     XM_071830475.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1708
                     /gene="LOC139840230"
                     /note="TITAN-like protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840230"
     CDS             78..1292
                     /gene="LOC139840230"
                     /codon_start=1
                     /product="TITAN-like protein isoform X2"
                     /protein_id="XP_071686576.1"
                     /db_xref="GeneID:139840230"
                     /translation="MKSPSNPNPNKRNSKKNNEFEFCKVCKLNHNLGRRHNYLPNHVK
                     SLSAFLSRFQSKISDVRFFIKNPSLLRPELASQNRFWCVFCDSDVTEPGSSFACERAI
                     NHLASADHLKNFKSFMWKYGGKMDRVDIFRVSDTDLAKYQKKCISMKSEDGNEQPGGA
                     LIGPSNDIHNELKFDYVDSFDRRHNFNFPNGVLPLQNHTNEKYQVSHSDMSRGAASSS
                     SSFDRKSLLLASDTKRLNNLGGNAGMNGLTGGYHHKGLVYSEKSEFDMEGSSAGLQKL
                     TQISSKVSDTGNVHSGAPPPWFDATNGVHFDPVVKTVKSKLNPNRVGAAWAEKRKLEM
                     ELESKGKLPVKSFDANWLPNFGRVWQSGTRKDSRKQFEEEVKKLPEEIQSDSSLQLQP
                     YISKRMRREDNG"
     misc_feature    141..1211
                     /gene="LOC139840230"
                     /note="Coiled coil protein 84; Region: CCDC84; pfam14968"
                     /db_xref="CDD:464412"
ORIGIN      
        1 ttctacttct cctaatctac ccctgaactg aaatctaaca atttgacgtt ttgattatcg
       61 tccaaacaat tggctcgatg aagtcaccat caaaccctaa ccctaataaa cgaaactcga
      121 agaagaataa cgaatttgag ttttgtaaag tatgtaagct gaatcacaat ctaggtcgtc
      181 gtcataatta cttaccgaat cacgttaaat ccttatcagc atttctatct cgatttcaat
      241 ctaagatatc tgacgtacgg ttttttatta agaaccctag cttacttcgt ccggagcttg
      301 cttctcaaaa taggttttgg tgcgtgtttt gcgattcaga tgttacggaa cccggtagtt
      361 cgtttgcttg tgagagagca atcaaccatc ttgcgagtgc ggatcacttg aaaaatttca
      421 aaagttttat gtggaaatac ggtggtaaaa tggaccgcgt tgacattttc cgggtttccg
      481 atacagatct tgctaagtat caaaagaagt gcatatcaat gaagagtgaa gatggtaatg
      541 aacaacctgg tggagcttta atcggccctt caaatgatat ccacaatgaa ctgaaatttg
      601 attatgtaga tagctttgac agacgtcata actttaattt tccaaatggt gttttacctt
      661 tacaaaatca tacaaatgag aaatatcagg tatcccattc agatatgtct agaggtgcag
      721 catctagcag ttcttcgttt gataggaaat cgttgctgct ggcttcggac acaaagcgtt
      781 taaataatct aggaggtaat gcaggcatga atgggctaac tggaggttat catcacaaag
      841 gactggtata ttcagagaaa agtgaatttg atatggaggg tagttcagca ggtttgcaga
      901 agctgacaca aatttcttcc aaagtatcgg atacaggaaa cgtgcattct ggagctcccc
      961 ctccttggtt tgatgcaacc aatggagttc attttgaccc ggttgttaaa accgtgaagt
     1021 caaaattaaa ccctaatagg gttggggctg catgggcaga aaaaagaaaa ttagagatgg
     1081 agttggagag taaagggaag ttgcctgtta aaagttttga tgccaactgg cttcccaact
     1141 ttggtagagt gtggcaatca ggaaccagga aggactccag gaaacaattt gaggaggaag
     1201 ttaagaaact tccggaagaa atccaatctg attcttcatt gcagttgcag ccttatataa
     1261 gcaagagaat gcgtcgggaa gataatggat gatgtatctg ctcacagcaa gaaaagagtc
     1321 ctgctaataa cgtcaaagcg tatgttatca tggtgtctct gtatttccac catacagtcg
     1381 catatggatt gtaagatgca aaatccgaag aatttagaat tttgacacta ccatttgctc
     1441 ggaccatttg ctactgagaa ctgaaaagga acactactgc atttaatgaa gtaaatatgc
     1501 catgctttcc ttgtttgatt tggttattaa gtactggtcc ttattatgat ttctaactcg
     1561 aaaaataatt ttgaaaataa tatattaaca tctggtctgg ttaatgctac ttggcataga
     1621 gttttagtaa agaatgtaat tcatttgatt ttgttatttt ttttcttctc actctcaatg
     1681 cttcaaatag tagctctttt acctgaaa
//
LOCUS       XM_071830476            1020 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides light-harvesting
            complex-like protein 3 isotype 2, chloroplastic (LOC139840231),
            mRNA.
ACCESSION   XM_071830476
VERSION     XM_071830476.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1020
                     /gene="LOC139840231"
                     /note="light-harvesting complex-like protein 3 isotype 2,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139840231"
     CDS             138..842
                     /gene="LOC139840231"
                     /codon_start=1
                     /product="light-harvesting complex-like protein 3 isotype
                     2, chloroplastic"
                     /protein_id="XP_071686577.1"
                     /db_xref="GeneID:139840231"
                     /translation="MALFSSTPTTKLPSFSSSSKTHLPINLFQSVKPQRQLLFMSIRS
                     TENGSGAAAVIVEEKTDSEVGNGAPVANLVEEVALKYEDPKWVSGTWDLKQFQKGGAT
                     DWDAVIDAEVKRRKFLEDNPESSNNDFPVVFDTSIIPWWAWMKRFHLPEAELLNGRAA
                     MVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLLIRKNEDVDNLKKLLDETT
                     FYDKQWQATWQDEKKE"
     misc_feature    138..833
                     /gene="LOC139840231"
                     /note="light-harvesting-like protein 3; Provisional;
                     Region: PLN00014"
                     /db_xref="CDD:177653"
     polyA_site      1020
                     /gene="LOC139840231"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcacttcact cctgcttaaa tactatcacc acttcaattc tcagccctag cttaatttcc
       61 tcaatcacac acacacaata tgttctaatc tttactccag aaaattaaaa ttcaaattat
      121 aaatatcgcc ttcatcaatg gctttatttt cttcaacccc aaccacaaag cttccttctt
      181 tttcatcttc atcgaaaacc cacttaccaa ttaacttatt tcagtctgta aagcctcaaa
      241 ggcagttgct ttttatgtca attagaagta ctgaaaatgg gtctggagct gctgccgtta
      301 ttgttgaaga aaagacagat tctgaggttg gaaacggagc tccggttgcg aatttggttg
      361 aggaagtggc tctgaaatat gaagatccga aatgggtttc gggtacttgg gatttaaagc
      421 agtttcagaa aggtggagca accgattggg atgctgttat tgatgctgag gttaaaagga
      481 ggaaatttct agaagacaat ccagaatctt ccaacaatga cttccctgta gtttttgaca
      541 cctcgattat tccatggtgg gcttggatga agcggtttca tcttcctgaa gccgaactgc
      601 tcaatggtcg agctgcaatg gtgggattct tcatggctta ctttgtggat agtttgactg
      661 gtgtcggtct agttgaccag atgggaaatt tcttctgcaa aacactttta ttcgtagcag
      721 tagctggtgt tcttctaatt cgaaagaacg aagatgttga taacttaaag aaactgcttg
      781 atgagacaac attttacgac aagcagtggc aagcaacttg gcaagacgag aagaaagaat
      841 aatagtggac aacggatgaa tggtatttat gtaatggtat aatttgatta atagaatatc
      901 acagtttgca tcttgtttta agtatattgg tttaatttaa ccttatacgg tttgaataga
      961 tgaacccact taaaactaag ttatttgaaa aaaccggaac aaggtatgtc gtcgtggcta
//
LOCUS       XM_071830477            1440 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840232), mRNA.
ACCESSION   XM_071830477
VERSION     XM_071830477.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1440
                     /gene="LOC139840232"
                     /note="uncharacterized LOC139840232; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840232"
     CDS             97..1221
                     /gene="LOC139840232"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686578.1"
                     /db_xref="GeneID:139840232"
                     /translation="MAVDNMPPIVYTQLTHLLHHSPYSIKVEQMWSGSKNPALLDRFT
                     LAIPFCLDYIKWDVIYNAHFPLLPPDIIFGPEDESFRPYGEGESKVKNSFSDWNCKDP
                     TRLMSLIHQLRSLYMAYQKKRVGEVDDDRLKFEINTMYSREGIEMYMSSGADKPEEVK
                     FAVPLLDVDLNKMVAGSTWQHQQKIYLQVVYPVSRKYLAMASAPRLKLVSSPELKDLF
                     SIDEFRLPPWLEGMCMAEYLPNLEEMLESQIRDAITSIEVRRKFITALAVPFGRPLEA
                     DPVFCRKSTFLASSGVFTFLVQFTLPLQFPKHQPALILQSSQHFQTHLSKPIKSSNLQ
                     DYPWSPRWDVTEMAERIFDYLVEECLIFKKQCSEVLIQQR"
     misc_feature    115..1200
                     /gene="LOC139840232"
                     /note="BRCA1-A and BRISC complex subunit BRE and related
                     proteins; Region: BRE-like; cl45929"
                     /db_xref="CDD:480269"
     misc_feature    order(136..144,157..159,163..165,187..195,220..222,
                     226..228,259..261,265..267,271..273,277..282,292..318,
                     337..345,367..369,376..381,385..387,595..603,640..648,
                     652..654,706..723,730..735,739..741,754..756,763..777,
                     844..846,853..858,862..864,874..876,883..891,895..933,
                     937..939,943..945,949..951,955..966,973..975,988..990,
                     1039..1053,1084..1086,1141..1143,1150..1152,1159..1164,
                     1171..1173)
                     /gene="LOC139840232"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467820"
     polyA_site      1440
                     /gene="LOC139840232"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgggtgaata caagtactaa acctcgtctt gtctcactaa acgaaaccca aaattgatcg
       61 gtaaaaagtt caccggagat caactttcgc acaatcatgg cggttgataa catgccaccg
      121 atcgtctaca cacaactcac tcaccttctc catcattcac cttattcaat caaggttgaa
      181 cagatgtggt ctggttctaa aaatcccgct ttacttgatc gattcacttt agccattccc
      241 ttttgtctcg attatatcaa atgggatgtt atatacaatg cacactttcc attgttgcca
      301 cccgatatta ttttcggacc tgaagatgaa agttttcgac catacggaga aggagagtcg
      361 aaagtgaaga atagtttttc ggattggaat tgcaaagatc caactaggct aatgtctttg
      421 attcatcagc taaggagttt gtacatggcg tatcagaaaa agcgtgttgg tgaagttgat
      481 gatgatagac tcaagtttga aattaacacc atgtattctc gcgagggaat tgaaatgtat
      541 atgagttctg gtgctgacaa gccagaagag gtgaaatttg cagttccatt actggacgtg
      601 gatttaaaca aaatggttgc ggggtccact tggcagcacc aacagaagat atatttgcag
      661 gttgtatatc ccgtgagcag aaaatatttg gcaatggctt cagctccacg tttaaagttg
      721 gtatcttcac ctgagctgaa agatttgttt tctatcgatg agttcagact tcctccttgg
      781 ttggaaggaa tgtgcatggc tgaatatctt cccaatttag aggagatgct cgaatcacag
      841 ataagagatg ctattacatc aatcgaagtt agaaggaagt ttattacagc gttggctgtt
      901 ccctttggaa ggccattaga agctgatcca gtattttgca ggaagtcaac atttttagct
      961 agctctggcg tgtttacttt tctggtgcag tttactcttc cacttcagtt tccaaagcat
     1021 caacctgctc tgattcttca aagttctcag cattttcaaa cgcatcttag caaaccaata
     1081 aagtcatcta atttgcaaga ttatccttgg agtcctagat gggatgtgac agaaatggct
     1141 gagagaatat ttgattatct tgtggaagaa tgtttaattt tcaaaaagca atgcagtgaa
     1201 gtactgattc agcagcgtta gagacgcggc taactcaatt tcttgtatta ttcacattat
     1261 tttagatctt tagagtgtgc catttgtttc cgaatttgtg agaaagcagt atgtaacatg
     1321 atgattggat atggatttga gtattgtgat taggttgttc tggatggata tggtctagta
     1381 ttttgattag aatgtgactt gctaaacccg aacccagcct agttggttag attggttgaa
//
LOCUS       XM_071830478            1330 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fruit protein pKIWI502
            (LOC139840233), mRNA.
ACCESSION   XM_071830478
VERSION     XM_071830478.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1330
                     /gene="LOC139840233"
                     /note="fruit protein pKIWI502; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840233"
     CDS             110..1009
                     /gene="LOC139840233"
                     /codon_start=1
                     /product="fruit protein pKIWI502"
                     /protein_id="XP_071686579.1"
                     /db_xref="GeneID:139840233"
                     /translation="MSLTTTISLPNPNSLPHISSHARHHTISFPMATIIRRLNHPILR
                     RRSLAIAAAVRQQDTTLWTPASLATVKPAAESLFHVSIDVSSSPDLASSYTVAGQYLQ
                     VRIPDVEKPSFLAIASPPSVAYTNGVFEFLIKSIAGSTAELLCGLGKGDVVELSPVMG
                     KGFDTNQISPPEEYQSVLIFATGSGISPIRSLIESGFGADKRSDVRLYYGARNLQRMA
                     YQDRFKAWESEGVTVVPVLSQPDDGWVGESGYVQAAFARAKQLYAPESTGAVLCGQKQ
                     MAEEVTSILVGNGVPSEKILKNF"
     misc_feature    398..997
                     /gene="LOC139840233"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; Region: FNR_like;
                     cd00322"
                     /db_xref="CDD:99778"
     misc_feature    order(407..409,446..454,503..511,521..532,659..661)
                     /gene="LOC139840233"
                     /note="FAD binding pocket [chemical binding]; other site"
                     /db_xref="CDD:99778"
     misc_feature    order(521..523,530..532,539..541,557..559)
                     /gene="LOC139840233"
                     /note="phosphate binding motif [ion binding]; other site"
                     /db_xref="CDD:99778"
     misc_feature    order(644..646,656..667,671..673)
                     /gene="LOC139840233"
                     /note="beta-alpha-beta structure motif; other site"
                     /db_xref="CDD:99778"
     misc_feature    order(659..664,737..745,926..931)
                     /gene="LOC139840233"
                     /note="NAD binding pocket [chemical binding]; other site"
                     /db_xref="CDD:99778"
     polyA_site      1330
                     /gene="LOC139840233"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtatccgcca cgtgtgtgta gtaaaattaa caacccgcac attttaacac cgccgcctta
       61 ccgtccacct tctacggcgg cactctctaa aatacacaca aaactcacga tgtctcttac
      121 caccactatt tccttaccga accctaattc gcttcctcac attagctccc atgctcgtca
      181 ccacaccata tccttcccta tggccaccat catccgccgt ctaaaccacc ctatcctccg
      241 tcgacgatcc ctcgctatcg ccgccgcagt ccgtcaacaa gacaccactc tctggacccc
      301 tgcatctctc gccactgtca aacctgccgc tgaatcgctc ttccacgtct ccatcgacgt
      361 atcgtcatcg ccggatctag cgtcatctta caccgtcgcc ggacagtatc tccaggtacg
      421 tattccggac gttgagaaac cgtcgttttt agcgatcgct tcgccgccgt cggtggctta
      481 tacaaacggt gttttcgagt ttttaatcaa aagtattgcc ggctctacgg ctgagctgtt
      541 gtgtggtctc ggaaaaggtg atgttgtgga attgagtccg gttatgggga aaggatttga
      601 tacaaatcaa atatctccac ctgaagagta tcaatctgtt ttaatcttcg caactggatc
      661 cggaattagc cccattcgat ctttaattga gtctggcttc ggtgccgaca agagatcaga
      721 cgttagatta tattatggtg ctagaaacct tcaaagaatg gcttatcagg atagattcaa
      781 agcttgggaa tctgagggag ttactgttgt gcctgtgttg tctcagcctg atgatggttg
      841 ggttggtgaa tccggctacg tacaggcagc ttttgctaga gctaaacaat tgtatgcacc
      901 tgagtcaact ggtgctgtgt tgtgtggtca aaaacaaatg gctgaggaag ttacttctat
      961 tcttgtcggc aatggagtgc catctgagaa gatcctaaag aatttttgag gtccaatata
     1021 atgatggatt gttgtattga ttatatatat atacgtgggg aaatatttgc tctcttgatt
     1081 cattcagatt gccaagcatc tcagctcggg ctcacaataa taacaatttt tttagatata
     1141 aatgtacaat tattatttac ctacatagaa gctcattttc aattggtcaa tcatgtaaca
     1201 acaattgatg cccaaagatc aagttaaaga ttacaaatgt ccatgaacca gttgttgatc
     1261 attgctgcta tgtgtcatgt accattaatt tagaaagtcg tgttgaaatt aacgtttgaa
     1321 tacttttgaa
//
LOCUS       XM_071830479            4019 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RUN1-like (LOC139840234), transcript variant X1, mRNA.
ACCESSION   XM_071830479
VERSION     XM_071830479.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4019
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4019
                     /gene="LOC139840234"
                     /note="disease resistance protein RUN1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840234"
     CDS             318..3725
                     /gene="LOC139840234"
                     /codon_start=1
                     /product="disease resistance protein Roq1-like isoform X1"
                     /protein_id="XP_071686580.1"
                     /db_xref="GeneID:139840234"
                     /translation="MASSSSHSAPSSFYHVFLSFRGGDTRKNFVDHLYSALAIDRPII
                     VYKDDKNLPRGETIRPALFQAIEQSKIAVVVFSKNYADSSWCLDELSHIMKCRDKNGL
                     IVMPIFYDVEPSDVRKRKRDFGEAFAKQEANNVNKADSWRKALFDASNIAGWEPKHFA
                     DGHESELIKGIVDTVLKNMSFSGSQDVDEGLVGMRDRVDELISKLKLDSSGVRMVGIW
                     GVGGGGKTTLATSVFKEIYSQFKGHCIVENVREEFNKGNLEKLQNKILKTMFRVNMEV
                     PSVTEGKTMIKRMLCRSKVLVVLDDIDDSRQLEALAGSHDWFGSGSRVIITTRDEHLL
                     LKHKVDHVSHVRLLAHDEASSLFKKYAYREENVINDYVILSSRVVYYAHGLPLALRVA
                     GSFLCDKNNVEWESYLEMLERTPDAEVMDILRISYEGLKNYQKELFLDIACFFRGKEK
                     RDAMEILDAFGFNPDIGIKVLEQRALITFVNDYFQMHDLIQEMGHLIVRGENGKYPEN
                     HSRVWKQDEIRDMDETTVKENDKIEAIYCYGHSHSCEILSKMKKLRWLTVKRVDNRFA
                     YYFVDDDVEDVDYEEYVEGNNDDGEDDNDDNGNDDDNDVDDDDDDDDDNDNDNDDNKE
                     DKDDVEHLKGPDFLSNELQCIIWEDYPVNSFPDSFKAIKLVVLRLYYSLQKQLWNDID
                     KHLPRLKVLELCSAKKLLDTPNFNHLPCLQRLTFYRCDELIEIHPSLGYHKKLERIRV
                     EGCPKFRMFPAIVQMKSLKYLFIHKYPELLKFPVIRSKMESLEELYLQYVQIQVLPSS
                     IGDCCTNLIQLFIHGCSKLTTMEFQLDALKHLKTFSCSGVSFQLNTTGLFDQVQDGLR
                     VLNFIDCHLNDGDIPFDISQLFNLQSLNLSFNDFSKLPSTISQLTKLRVLDLRNCRNL
                     LKLPSTISQLVQLKVLIIGDCINLEIFPEFPSSLAVLLADGCPKITSIGDSITNCKCL
                     CDVRITDGSILTDFDRLFDSMIQGKDSGNCIWSLQLEGLVEIPNSMVRPKDILNGKRY
                     ILQLPENWCYYNCGFIMYAVLPRGTLVDVEITMRQVTGNSSGMDYQDDVVRKKSIMND
                     EVTWVGYVPFSSLRHTSWWDVTCGQVSFEIVNIYINGRNKYYYPKCR"
     misc_feature    357..>3272
                     /gene="LOC139840234"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
     misc_feature    2307..2378
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2379..2447
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2448..2519
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2520..2588
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2661..2732
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2733..2879
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2880..2954
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2955..3023
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3096..3158
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3159..3230
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 caaaataagt tcccaccgag aaatttctcc ctcatttcag atttgtagtg aaccgaaacg
       61 cgtgattgac tgactgactt ctgtctaaaa aattcaatac cttttccttt catagtttta
      121 ttattacggc agattcacaa taatcacaac cactctttca ttgatttatc gtccatcatc
      181 acttatctgc cggtgccggc catcgtccat caccaccact catacatcgc cgttttacca
      241 aaaatatata aagctatatg ttttgtacac tatgaattaa ttacgttggt gtaaaaatta
      301 gtcaaacact tcgatcaatg gcttcttcat cttctcactc tgctccttct tcattttatc
      361 atgtatttct aagttttaga ggaggcgata cccgcaaaaa tttcgtagac catctctact
      421 cggctcttgc gatagatcga ccaatcatcg tctacaagga cgataaaaat cttccccgtg
      481 gtgaaaccat ccgtccagca ctgttccagg ctattgaaca atctaagatt gctgtcgtag
      541 tattctccaa aaactatgca gattcttcgt ggtgtcttga tgaactttca catattatga
      601 agtgtagaga taagaatggg ttaatcgtta tgcccatatt ctatgatgtg gaaccctcgg
      661 atgtgaggaa aaggaaaagg gatttcggag aagcttttgc aaaacaagag gcgaataacg
      721 tcaataaagc tgattcgtgg agaaaagcac tttttgatgc aagtaacatt gctggatggg
      781 aacctaaaca ctttgctgac gggcatgaat cagaactcat caaagggatt gttgatacag
      841 ttttgaaaaa tatgtctttc tccggttcac aagacgttga tgaaggcctt gttggaatga
      901 gggatcgcgt ggacgaacta atatcaaaat tgaaacttga ttctagtggt gtgcgaatgg
      961 ttgggatatg gggtgtcggg ggtggtggta aaactactct tgctacttct gtatttaagg
     1021 aaatatatag ccaatttaag ggtcactgca tagttgagaa cgttagggag gaattcaaca
     1081 aaggcaactt ggaaaaattg caaaataaaa ttttgaaaac catgtttaga gtaaatatgg
     1141 aagtacctag tgttacagaa ggtaaaacaa tgataaaacg tatgctgtgt cgtagtaaag
     1201 tgttagtggt tcttgacgat atcgatgatt cacgccaact ggaggcttta gctggatctc
     1261 atgattggtt tggtagtggg agcagagtaa taataacaac tagagatgaa cacttgctac
     1321 ttaaacacaa ggtagaccat gtctctcatg ttagattgtt agcacacgac gaagcttcat
     1381 ctctctttaa gaaatatgca tatagggaag aaaatgttat aaacgattat gtgatacttt
     1441 catcacgtgt agtttattat gctcatggac ttccattggc acttagagtt gcgggttctt
     1501 ttctatgtga caaaaacaat gttgagtggg aaagttacct ggaaatgtta gaaagaaccc
     1561 cagatgccga agtcatggat atacttagga ttagttatga agggcttaaa aattaccaga
     1621 aagagttatt cttagatatt gcatgtttct ttaggggaaa ggaaaagcga gatgcaatgg
     1681 agatacttga tgcttttggt tttaatccag atatagggat aaaggtgttg gagcaaagag
     1741 ctctgataac ttttgtgaat gattattttc aaatgcacga tctgattcaa gagatgggac
     1801 acctcattgt tagaggagaa aatggcaagt atcctgaaaa tcatagcaga gtttggaagc
     1861 aagatgaaat ccgtgacatg gatgaaacaa cggtaaagga aaatgacaag attgaagcga
     1921 tatattgtta tggtcattct cactcatgtg agattttgtc aaagatgaag aagctaaggt
     1981 ggcttactgt gaaacgagtt gataatcgat ttgcttatta tttcgtagat gatgacgtgg
     2041 aggatgttga ttatgaggag tatgtagagg ggaacaatga tgatggcgag gatgataatg
     2101 atgacaatgg caatgatgat gataatgatg ttgatgatga tgatgatgat gatgatgata
     2161 atgataatga taatgatgat aacaaggagg ataaagatga cgttgagcat ttgaaaggac
     2221 ctgattttct ttcaaatgag ttgcagtgta ttatttggga agattatcct gtgaattcat
     2281 tcccagacag ttttaaagca ataaagctcg ttgttttaag actgtattac agcttgcaaa
     2341 aacaactttg gaatgatata gataagcatc tcccacgttt gaaagtgctt gaactctgtt
     2401 ctgcaaagaa gttactcgac actccaaatt ttaatcatct cccatgtctt caaaggttaa
     2461 cattctatcg ttgtgatgag ttaatcgaga ttcacccatc acttggatat cataaaaagc
     2521 ttgagcgcat acgtgtagaa ggctgtccca agtttaggat gtttcctgca atcgtgcaga
     2581 tgaaatcact taaatatctt tttattcata aatacccgga attacttaag ttcccggtaa
     2641 tcagaagcaa aatggaaagc ttggaagagt tatatttgca atatgttcag atacaagttc
     2701 tgccctcatc aatcggagac tgttgcacca accttattca gctattcata catgggtgta
     2761 gtaaattaac gacaatggaa ttccaacttg atgccttgaa gcatttgaaa acattttctt
     2821 gttctggtgt tagcttccag cttaacacta cgggtttgtt tgatcaggtg caagatggct
     2881 tacgagtgtt gaattttatt gactgccatt tgaacgatgg agacattcca tttgatatta
     2941 gtcaactatt caacttacaa agtttgaatc tgagttttaa tgatttttca aagttacctt
     3001 ccaccatctc acaattgaca aaactgagag ttctcgacct tagaaactgt cgtaaccttc
     3061 taaagttacc ttccaccatc tcacaattgg tacagttaaa agtcctcatc atcggcgatt
     3121 gcattaacct tgaaatattc cccgagttcc catcaagttt agctgttctc ttggcagacg
     3181 gatgccctaa gattacatca ataggagatt ctatcacaaa ttgtaaatgc ttatgtgatg
     3241 tccgaattac tgatggaagt attctaactg attttgacag gttattcgat tccatgatcc
     3301 agggaaagga tagtggaaat tgcatttggt ctctccaact tgaaggcctt gttgagattc
     3361 caaatagtat ggtacgtcct aaagatattc ttaatgggaa aagatatata ctgcaacttc
     3421 cagagaactg gtgctattac aactgcggat tcataatgta cgcagttttg ccacgtggca
     3481 cattggttga tgtcgagata accatgaggc aggtgacggg aaattcatcg ggtatggatt
     3541 atcaggatga tgtggttcgg aagaagagta taatgaatga tgaagtcaca tgggtgggat
     3601 atgttccttt tagttcattg agacacactt catggtggga tgtaacatgc ggtcaggttt
     3661 cgtttgaaat tgtaaacata tatataaatg gtagaaataa atattattat cctaaatgca
     3721 gatagtttgg agttagtctt atcaggaaaa gtgaaaatgg tcccgccaac ctatcaacag
     3781 atccttttaa gtttttttcc gatgataggt atacaagaag gatcgatatc ttacaagatt
     3841 caaaggatgc tttagtttac agagttcctt cactagactg gtatcattag gaacatggtc
     3901 ctttgtgaac ataaattagc agaaagcctc attttgttat ccttttgttt cattatctgt
     3961 agatgcaaat tatataacag cactgaaaca gtttgtaaac agaaagtaaa ctatttaat
//
LOCUS       XM_071830480            4013 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RUN1-like (LOC139840234), transcript variant X2, mRNA.
ACCESSION   XM_071830480
VERSION     XM_071830480.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4013
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4013
                     /gene="LOC139840234"
                     /note="disease resistance protein RUN1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840234"
     CDS             318..3719
                     /gene="LOC139840234"
                     /codon_start=1
                     /product="disease resistance protein Roq1-like isoform X2"
                     /protein_id="XP_071686581.1"
                     /db_xref="GeneID:139840234"
                     /translation="MASSSSHSAPSSFYHVFLSFRGGDTRKNFVDHLYSALAIDRPII
                     VYKDDKNLPRGETIRPALFQAIEQSKIAVVVFSKNYADSSWCLDELSHIMKCRDKNGL
                     IVMPIFYDVEPSDVRKRKRDFGEAFAKQEANNVNKADSWRKALFDASNIAGWEPKHFA
                     DGHESELIKGIVDTVLKNMSFSGSQDVDEGLVGMRDRVDELISKLKLDSSGVRMVGIW
                     GVGGGGKTTLATSVFKEIYSQFKGHCIVENVREEFNKGNLEKLQNKILKTMFRVNMEV
                     PSVTEGKTMIKRMLCRSKVLVVLDDIDDSRQLEALAGSHDWFGSGSRVIITTRDEHLL
                     LKHKVDHVSHVRLLAHDEASSLFKKYAYREENVINDYVILSSRVVYYAHGLPLALRVA
                     GSFLCDKNNVEWESYLEMLERTPDAEVMDILRISYEGLKNYQKELFLDIACFFRGKEK
                     RDAMEILDAFGFNPDIGIKVLEQRALITFVNDYFQMHDLIQEMGHLIVRGENGKYPEN
                     HSRVWKQDEIRDMDETTENDKIEAIYCYGHSHSCEILSKMKKLRWLTVKRVDNRFAYY
                     FVDDDVEDVDYEEYVEGNNDDGEDDNDDNGNDDDNDVDDDDDDDDDNDNDNDDNKEDK
                     DDVEHLKGPDFLSNELQCIIWEDYPVNSFPDSFKAIKLVVLRLYYSLQKQLWNDIDKH
                     LPRLKVLELCSAKKLLDTPNFNHLPCLQRLTFYRCDELIEIHPSLGYHKKLERIRVEG
                     CPKFRMFPAIVQMKSLKYLFIHKYPELLKFPVIRSKMESLEELYLQYVQIQVLPSSIG
                     DCCTNLIQLFIHGCSKLTTMEFQLDALKHLKTFSCSGVSFQLNTTGLFDQVQDGLRVL
                     NFIDCHLNDGDIPFDISQLFNLQSLNLSFNDFSKLPSTISQLTKLRVLDLRNCRNLLK
                     LPSTISQLVQLKVLIIGDCINLEIFPEFPSSLAVLLADGCPKITSIGDSITNCKCLCD
                     VRITDGSILTDFDRLFDSMIQGKDSGNCIWSLQLEGLVEIPNSMVRPKDILNGKRYIL
                     QLPENWCYYNCGFIMYAVLPRGTLVDVEITMRQVTGNSSGMDYQDDVVRKKSIMNDEV
                     TWVGYVPFSSLRHTSWWDVTCGQVSFEIVNIYINGRNKYYYPKCR"
     misc_feature    357..>3266
                     /gene="LOC139840234"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
     misc_feature    2301..2372
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2373..2441
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2442..2513
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2514..2582
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2655..2726
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2727..2873
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2874..2948
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2949..3017
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3090..3152
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3153..3224
                     /gene="LOC139840234"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 caaaataagt tcccaccgag aaatttctcc ctcatttcag atttgtagtg aaccgaaacg
       61 cgtgattgac tgactgactt ctgtctaaaa aattcaatac cttttccttt catagtttta
      121 ttattacggc agattcacaa taatcacaac cactctttca ttgatttatc gtccatcatc
      181 acttatctgc cggtgccggc catcgtccat caccaccact catacatcgc cgttttacca
      241 aaaatatata aagctatatg ttttgtacac tatgaattaa ttacgttggt gtaaaaatta
      301 gtcaaacact tcgatcaatg gcttcttcat cttctcactc tgctccttct tcattttatc
      361 atgtatttct aagttttaga ggaggcgata cccgcaaaaa tttcgtagac catctctact
      421 cggctcttgc gatagatcga ccaatcatcg tctacaagga cgataaaaat cttccccgtg
      481 gtgaaaccat ccgtccagca ctgttccagg ctattgaaca atctaagatt gctgtcgtag
      541 tattctccaa aaactatgca gattcttcgt ggtgtcttga tgaactttca catattatga
      601 agtgtagaga taagaatggg ttaatcgtta tgcccatatt ctatgatgtg gaaccctcgg
      661 atgtgaggaa aaggaaaagg gatttcggag aagcttttgc aaaacaagag gcgaataacg
      721 tcaataaagc tgattcgtgg agaaaagcac tttttgatgc aagtaacatt gctggatggg
      781 aacctaaaca ctttgctgac gggcatgaat cagaactcat caaagggatt gttgatacag
      841 ttttgaaaaa tatgtctttc tccggttcac aagacgttga tgaaggcctt gttggaatga
      901 gggatcgcgt ggacgaacta atatcaaaat tgaaacttga ttctagtggt gtgcgaatgg
      961 ttgggatatg gggtgtcggg ggtggtggta aaactactct tgctacttct gtatttaagg
     1021 aaatatatag ccaatttaag ggtcactgca tagttgagaa cgttagggag gaattcaaca
     1081 aaggcaactt ggaaaaattg caaaataaaa ttttgaaaac catgtttaga gtaaatatgg
     1141 aagtacctag tgttacagaa ggtaaaacaa tgataaaacg tatgctgtgt cgtagtaaag
     1201 tgttagtggt tcttgacgat atcgatgatt cacgccaact ggaggcttta gctggatctc
     1261 atgattggtt tggtagtggg agcagagtaa taataacaac tagagatgaa cacttgctac
     1321 ttaaacacaa ggtagaccat gtctctcatg ttagattgtt agcacacgac gaagcttcat
     1381 ctctctttaa gaaatatgca tatagggaag aaaatgttat aaacgattat gtgatacttt
     1441 catcacgtgt agtttattat gctcatggac ttccattggc acttagagtt gcgggttctt
     1501 ttctatgtga caaaaacaat gttgagtggg aaagttacct ggaaatgtta gaaagaaccc
     1561 cagatgccga agtcatggat atacttagga ttagttatga agggcttaaa aattaccaga
     1621 aagagttatt cttagatatt gcatgtttct ttaggggaaa ggaaaagcga gatgcaatgg
     1681 agatacttga tgcttttggt tttaatccag atatagggat aaaggtgttg gagcaaagag
     1741 ctctgataac ttttgtgaat gattattttc aaatgcacga tctgattcaa gagatgggac
     1801 acctcattgt tagaggagaa aatggcaagt atcctgaaaa tcatagcaga gtttggaagc
     1861 aagatgaaat ccgtgacatg gatgaaacaa cggaaaatga caagattgaa gcgatatatt
     1921 gttatggtca ttctcactca tgtgagattt tgtcaaagat gaagaagcta aggtggctta
     1981 ctgtgaaacg agttgataat cgatttgctt attatttcgt agatgatgac gtggaggatg
     2041 ttgattatga ggagtatgta gaggggaaca atgatgatgg cgaggatgat aatgatgaca
     2101 atggcaatga tgatgataat gatgttgatg atgatgatga tgatgatgat gataatgata
     2161 atgataatga tgataacaag gaggataaag atgacgttga gcatttgaaa ggacctgatt
     2221 ttctttcaaa tgagttgcag tgtattattt gggaagatta tcctgtgaat tcattcccag
     2281 acagttttaa agcaataaag ctcgttgttt taagactgta ttacagcttg caaaaacaac
     2341 tttggaatga tatagataag catctcccac gtttgaaagt gcttgaactc tgttctgcaa
     2401 agaagttact cgacactcca aattttaatc atctcccatg tcttcaaagg ttaacattct
     2461 atcgttgtga tgagttaatc gagattcacc catcacttgg atatcataaa aagcttgagc
     2521 gcatacgtgt agaaggctgt cccaagttta ggatgtttcc tgcaatcgtg cagatgaaat
     2581 cacttaaata tctttttatt cataaatacc cggaattact taagttcccg gtaatcagaa
     2641 gcaaaatgga aagcttggaa gagttatatt tgcaatatgt tcagatacaa gttctgccct
     2701 catcaatcgg agactgttgc accaacctta ttcagctatt catacatggg tgtagtaaat
     2761 taacgacaat ggaattccaa cttgatgcct tgaagcattt gaaaacattt tcttgttctg
     2821 gtgttagctt ccagcttaac actacgggtt tgtttgatca ggtgcaagat ggcttacgag
     2881 tgttgaattt tattgactgc catttgaacg atggagacat tccatttgat attagtcaac
     2941 tattcaactt acaaagtttg aatctgagtt ttaatgattt ttcaaagtta ccttccacca
     3001 tctcacaatt gacaaaactg agagttctcg accttagaaa ctgtcgtaac cttctaaagt
     3061 taccttccac catctcacaa ttggtacagt taaaagtcct catcatcggc gattgcatta
     3121 accttgaaat attccccgag ttcccatcaa gtttagctgt tctcttggca gacggatgcc
     3181 ctaagattac atcaatagga gattctatca caaattgtaa atgcttatgt gatgtccgaa
     3241 ttactgatgg aagtattcta actgattttg acaggttatt cgattccatg atccagggaa
     3301 aggatagtgg aaattgcatt tggtctctcc aacttgaagg ccttgttgag attccaaata
     3361 gtatggtacg tcctaaagat attcttaatg ggaaaagata tatactgcaa cttccagaga
     3421 actggtgcta ttacaactgc ggattcataa tgtacgcagt tttgccacgt ggcacattgg
     3481 ttgatgtcga gataaccatg aggcaggtga cgggaaattc atcgggtatg gattatcagg
     3541 atgatgtggt tcggaagaag agtataatga atgatgaagt cacatgggtg ggatatgttc
     3601 cttttagttc attgagacac acttcatggt gggatgtaac atgcggtcag gtttcgtttg
     3661 aaattgtaaa catatatata aatggtagaa ataaatatta ttatcctaaa tgcagatagt
     3721 ttggagttag tcttatcagg aaaagtgaaa atggtcccgc caacctatca acagatcctt
     3781 ttaagttttt ttccgatgat aggtatacaa gaaggatcga tatcttacaa gattcaaagg
     3841 atgctttagt ttacagagtt ccttcactag actggtatca ttaggaacat ggtcctttgt
     3901 gaacataaat tagcagaaag cctcattttg ttatcctttt gtttcattat ctgtagatgc
     3961 aaattatata acagcactga aacagtttgt aaacagaaag taaactattt aat
//
LOCUS       XM_071830481            2519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RUN1-like (LOC139840234), transcript variant X3, mRNA.
ACCESSION   XM_071830481
VERSION     XM_071830481.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2519
                     /gene="LOC139840234"
                     /note="disease resistance protein RUN1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840234"
     CDS             318..2399
                     /gene="LOC139840234"
                     /codon_start=1
                     /product="disease resistance protein RUN1-like isoform X3"
                     /protein_id="XP_071686582.1"
                     /db_xref="GeneID:139840234"
                     /translation="MASSSSHSAPSSFYHVFLSFRGGDTRKNFVDHLYSALAIDRPII
                     VYKDDKNLPRGETIRPALFQAIEQSKIAVVVFSKNYADSSWCLDELSHIMKCRDKNGL
                     IVMPIFYDVEPSDVRKRKRDFGEAFAKQEANNVNKADSWRKALFDASNIAGWEPKHFA
                     DGHESELIKGIVDTVLKNMSFSGSQDVDEGLVGMRDRVDELISKLKLDSSGVRMVGIW
                     GVGGGGKTTLATSVFKEIYSQFKGHCIVENVREEFNKGNLEKLQNKILKTMFRVNMEV
                     PSVTEGKTMIKRMLCRSKVLVVLDDIDDSRQLEALAGSHDWFGSGSRVIITTRDEHLL
                     LKHKVDHVSHVRLLAHDEASSLFKKYAYREENVINDYVILSSRVVYYAHGLPLALRVA
                     GSFLCDKNNVEWESYLEMLERTPDAEVMDILRISYEGLKNYQKELFLDIACFFRGKEK
                     RDAMEILDAFGFNPDIGIKVLEQRALITFVNDYFQMHDLIQEMGHLIVRGENGKYPEN
                     HSRVWKQDEIRDMDETTVKENDKIEAIYCYGHSHSCEILSKMKKLRWLTVKRVDNRFA
                     YYFVDDDVEDVDYEEYVEGNNDDGEDDNDDNGNDDDNDVDDDDDDDDDNDNDNDDNKE
                     DKDDVEHLKGPDFLSNELQCIIWEDYPVNSFPDSFKAIKLVVLRLYYSLQKQLWNDID
                     KVIRFHDPGKG"
     misc_feature    357..>1823
                     /gene="LOC139840234"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
ORIGIN      
        1 caaaataagt tcccaccgag aaatttctcc ctcatttcag atttgtagtg aaccgaaacg
       61 cgtgattgac tgactgactt ctgtctaaaa aattcaatac cttttccttt catagtttta
      121 ttattacggc agattcacaa taatcacaac cactctttca ttgatttatc gtccatcatc
      181 acttatctgc cggtgccggc catcgtccat caccaccact catacatcgc cgttttacca
      241 aaaatatata aagctatatg ttttgtacac tatgaattaa ttacgttggt gtaaaaatta
      301 gtcaaacact tcgatcaatg gcttcttcat cttctcactc tgctccttct tcattttatc
      361 atgtatttct aagttttaga ggaggcgata cccgcaaaaa tttcgtagac catctctact
      421 cggctcttgc gatagatcga ccaatcatcg tctacaagga cgataaaaat cttccccgtg
      481 gtgaaaccat ccgtccagca ctgttccagg ctattgaaca atctaagatt gctgtcgtag
      541 tattctccaa aaactatgca gattcttcgt ggtgtcttga tgaactttca catattatga
      601 agtgtagaga taagaatggg ttaatcgtta tgcccatatt ctatgatgtg gaaccctcgg
      661 atgtgaggaa aaggaaaagg gatttcggag aagcttttgc aaaacaagag gcgaataacg
      721 tcaataaagc tgattcgtgg agaaaagcac tttttgatgc aagtaacatt gctggatggg
      781 aacctaaaca ctttgctgac gggcatgaat cagaactcat caaagggatt gttgatacag
      841 ttttgaaaaa tatgtctttc tccggttcac aagacgttga tgaaggcctt gttggaatga
      901 gggatcgcgt ggacgaacta atatcaaaat tgaaacttga ttctagtggt gtgcgaatgg
      961 ttgggatatg gggtgtcggg ggtggtggta aaactactct tgctacttct gtatttaagg
     1021 aaatatatag ccaatttaag ggtcactgca tagttgagaa cgttagggag gaattcaaca
     1081 aaggcaactt ggaaaaattg caaaataaaa ttttgaaaac catgtttaga gtaaatatgg
     1141 aagtacctag tgttacagaa ggtaaaacaa tgataaaacg tatgctgtgt cgtagtaaag
     1201 tgttagtggt tcttgacgat atcgatgatt cacgccaact ggaggcttta gctggatctc
     1261 atgattggtt tggtagtggg agcagagtaa taataacaac tagagatgaa cacttgctac
     1321 ttaaacacaa ggtagaccat gtctctcatg ttagattgtt agcacacgac gaagcttcat
     1381 ctctctttaa gaaatatgca tatagggaag aaaatgttat aaacgattat gtgatacttt
     1441 catcacgtgt agtttattat gctcatggac ttccattggc acttagagtt gcgggttctt
     1501 ttctatgtga caaaaacaat gttgagtggg aaagttacct ggaaatgtta gaaagaaccc
     1561 cagatgccga agtcatggat atacttagga ttagttatga agggcttaaa aattaccaga
     1621 aagagttatt cttagatatt gcatgtttct ttaggggaaa ggaaaagcga gatgcaatgg
     1681 agatacttga tgcttttggt tttaatccag atatagggat aaaggtgttg gagcaaagag
     1741 ctctgataac ttttgtgaat gattattttc aaatgcacga tctgattcaa gagatgggac
     1801 acctcattgt tagaggagaa aatggcaagt atcctgaaaa tcatagcaga gtttggaagc
     1861 aagatgaaat ccgtgacatg gatgaaacaa cggtaaagga aaatgacaag attgaagcga
     1921 tatattgtta tggtcattct cactcatgtg agattttgtc aaagatgaag aagctaaggt
     1981 ggcttactgt gaaacgagtt gataatcgat ttgcttatta tttcgtagat gatgacgtgg
     2041 aggatgttga ttatgaggag tatgtagagg ggaacaatga tgatggcgag gatgataatg
     2101 atgacaatgg caatgatgat gataatgatg ttgatgatga tgatgatgat gatgatgata
     2161 atgataatga taatgatgat aacaaggagg ataaagatga cgttgagcat ttgaaaggac
     2221 ctgattttct ttcaaatgag ttgcagtgta ttatttggga agattatcct gtgaattcat
     2281 tcccagacag ttttaaagca ataaagctcg ttgttttaag actgtattac agcttgcaaa
     2341 aacaactttg gaatgatata gataaggtta ttcgattcca tgatccaggg aaaggatagt
     2401 ggaaattgca tttggtctct ccaacttgaa ggccttgttg agattccaaa tagtatggta
     2461 cgtcctaaag atattcttaa tgggaaaaga tatatactgc aacttccaga gaactggtg
//
LOCUS       XM_071830482            1063 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable linoleate
            9S-lipoxygenase 5 (LOC139840235), mRNA.
ACCESSION   XM_071830482
VERSION     XM_071830482.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1063
                     /gene="LOC139840235"
                     /note="probable linoleate 9S-lipoxygenase 5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840235"
     CDS             233..616
                     /gene="LOC139840235"
                     /codon_start=1
                     /product="probable linoleate 9S-lipoxygenase 5"
                     /protein_id="XP_071686583.1"
                     /db_xref="GeneID:139840235"
                     /translation="MKKEHLEPNMSGVTVEQGEHHAMIEPFLIAANRQLSVVHPIFML
                     LPLHFPSMNINALATQILINTGGVLEMIVFPAKYAMEMSAVISKNRVFTEHALLADLL
                     KRGIAVKDESQPHRFKLLIEDYLSQ"
     misc_feature    <293..>604
                     /gene="LOC139840235"
                     /note="lipoxygenase; Region: PLN02337"
                     /db_xref="CDD:215193"
ORIGIN      
        1 actcttcagt tggccatttt tttattatta tttttaattt ttaattagta catttatgct
       61 taagttttga aacatctttt ctcggagtgg acaaatctgc gtggcaaaac agatgaataa
      121 tttgggagag aaatgcttgc agtaaaccct gaggtcattt gtcgacttga atcatgtgtt
      181 cccaccaacg aggaatcttg atctgacaga atattgtgac caaacgagct cgatgaaaaa
      241 ggaacatctt gaaccaaaca tgagtggagt aacagtagaa caaggtgaac atcatgcaat
      301 gatagagcca tttttaatag ctgctaatcg acaattaagt gtggttcatc cgattttcat
      361 gcttctgccg ctacattttc cgtcaatgaa cataaatgca ttagctacgc aaatactcat
      421 taacactggc ggtgtgcttg aaatgattgt ttttccagct aaatacgcca tggaaatgtc
      481 tgctgttatt tctaagaacc gggtattcac cgagcatgcg ttacttgctg atcttctcaa
      541 gagaggtatt gcagttaagg acgaaagcca accacaccgt tttaaactgc tcatagagga
      601 ttacctttcg cagtagatgg actagagatt tggtctgcaa tcgaaacgtg ggttcacgag
      661 taacgttctg tgtattacac ctcaaacgaa actgttcaag ttgaatcgga aattcaatca
      721 cgggggttgg agttgcgaac tgtgggcctc ggtgatgaca attttttttt attagttttc
      781 aatattatag aacattctat gccttaaata tgtgatagat ttaatagcgt tagcaataaa
      841 agtattttag ggagtataag aaatagaata gtaacttgat tatcaatcac gtataaagag
      901 tttattaaga aattagatat aatagttaac taatgcagca acgaagagaa tagactcgga
      961 gatgaggaaa cagaagcaac aaaatccact atatctttct ttgtagcaga tgaaggggtg
     1021 tatcgggtca aaacatgtga cccatttgac tcattttctt tta
//
LOCUS       XR_011757284            1428 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840236), ncRNA.
ACCESSION   XR_011757284
VERSION     XR_011757284.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1428
                     /gene="LOC139840236"
                     /note="uncharacterized LOC139840236; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840236"
     ncRNA           1..1428
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840236"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840236"
ORIGIN      
        1 taggggttct agagagtagc attcacttgg aaaaaaaacc ctacattctc ccaaaatcgt
       61 cagtaaaatc agaatcaatt atgaaacaaa catatattga agatgataat gaatggaaga
      121 ggcaaattcg tcgaacgtaa atccggattt agagcaaccg aaatctaatt tttacgaacc
      181 ctaatttcta ttgaagaacc gactacgact taaatcaata agcgaaattc gacgaaaatt
      241 agtgtttaaa tattgaaccc taacatctct gaaatcaggt attaatgagg ttttgactcg
      301 aaatttgatc acctactgct gctgggtatg ctttggtccc atgattttat ttagattagt
      361 gaagtgataa atagtgatca atattttgga aactttgaag ttagatgatg tttgttcacc
      421 aataagggaa aattatggtg caatatgaag tgacccagtt tcaatgaggt ataatgatgg
      481 aaatcatgat tggaatctgg tgctatatag gatgatcttg ttatcggtag tttaaaggct
      541 taaaaacgag tattttgctg acttgcttga ttattgtggt ttataccgtt ccacaagttc
      601 atcacaaaac catgtataaa gttgatgtta ttactgatat tgtttgtgat ccctttacag
      661 ttatttacgg gaatgttcta cttttggatg gcatggtcaa aggcatatta ttccgaaatc
      721 tgatcctttt cttggatgcc tcaaatattg ttccattgat cgacgttagt aatctataag
      781 ggtatgttaa attgaaagaa tatcaattgt cagttgaggt atgctcatgt atcattctta
      841 gtattatatt tttcttagtt taattgtcta tttgtatttt cttagttata aaaatataac
      901 gaatggtgtg ttggtgttct gatgcttatc aagtagtata ataattagtg atttatgaag
      961 tatcagtcag ttatgcttat gttaaaattt gtaaactgag tcacctcttc tatgttttga
     1021 tgctattaaa tcaaatataa aaaaaaatcc gtgattcata gtaggtggca atatgggctc
     1081 acttactatt tcaagggctc attcaaacca cttgatttat gctaaggtga gatttgattt
     1141 cgattttggt tacaatttcg ttttgatgga aaagaattat taatttttcg tagcagtaat
     1201 tagttttttt tttttttgtt cgctttttgt taaagacaaa caatttttag tttaaatttt
     1261 tgcatttatc gattatgatt attttacatt tcatgatggg aaatgagagt aggataatga
     1321 tccgctaatt agtcaatggg tttttttttt tttgccgttt gccacttgct tataatgaga
     1381 aataaaacct aattaatgaa gtagtgaaat atagttggac tcttcagt
//
LOCUS       XM_071830483             954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase,
            chloroplastic-like (LOC139840237), mRNA.
ACCESSION   XM_071830483
VERSION     XM_071830483.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..954
                     /gene="LOC139840237"
                     /note="palmitoyl-monogalactosyldiacylglycerol delta-7
                     desaturase, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     Proteins"
                     /db_xref="GeneID:139840237"
     CDS             1..954
                     /gene="LOC139840237"
                     /codon_start=1
                     /product="palmitoyl-monogalactosyldiacylglycerol delta-7
                     desaturase, chloroplastic-like"
                     /protein_id="XP_071686584.1"
                     /db_xref="GeneID:139840237"
                     /translation="MTSNIITFSSNVENEPNFKQIFMSDVVVTRKRNLFRGRKWNTLD
                     IITFVWILSVHLLALFAPFTFTWGAFWAAFWCYALCGMLGLTLSYHRNLAHRSLKLPK
                     WLEYTFAYFGVQAAQRDPIFWVSIHRSHHQYVESEKDPHSPTYGFWFSHIGWLFDSGF
                     IVEKYNERKNVEDLKSQAFYRFIKRTYLYHILAFALVVYALGGFSYLVWVVGVRITVS
                     YHLTFLVNSACHIWGNQVWNTGDLSKNNLWVALFTFGEGWHNNHHAFEYSARFGLKWW
                     EIDLCWWFIQFLEAIGLATNVKFPSPAHKLKRSFASTNKFK"
     misc_feature    79..933
                     /gene="LOC139840237"
                     /note="The membrane fatty acid desaturase
                     (Membrane_FADS)-like CD includes membrane FADSs, alkane
                     hydroxylases, beta carotene ketolases (CrtW-like),
                     hydroxylases (CrtR-like), and other related proteins. They
                     are present in all groups of organisms with the...;
                     Region: Membrane-FADS-like; cl00615"
                     /db_xref="CDD:445012"
     misc_feature    order(268..270,283..285,379..381,388..393,775..777,
                     784..789)
                     /gene="LOC139840237"
                     /note="Di-iron ligands [ion binding]; other site"
                     /db_xref="CDD:239582"
ORIGIN      
        1 atgacaagta acatcataac attttcttcc aatgttgaaa acgaaccaaa cttcaaacaa
       61 atatttatgt ccgatgtggt tgttacgagg aaaagaaatc tatttcgagg tcgaaaatgg
      121 aatactttag acatcataac atttgtttgg atcttaagtg ttcatttgtt agcgttgttt
      181 gcaccattca cgtttacttg gggtgcattt tgggcagcat tttggtgcta cgcgttgtgc
      241 ggaatgcttg gattaacgct ttcttaccat cggaatttag cacatcgtag tcttaagttg
      301 cccaaatggc tcgaatacac gttcgcttat tttggggttc aagctgctca gagggaccca
      361 atattttggg tgagtataca tagatcacat catcaatacg ttgagtcgga gaaagatcca
      421 cactctccaa cctacggatt ttggtttagt catattggtt ggttgtttga tagtggcttc
      481 atcgttgaga agtataatga acgcaaaaat gtagaagatt taaagagtca agctttctat
      541 agattcatca aaagaactta cctataccat atacttgcat ttgcactcgt cgtctatgct
      601 ttgggcgggt tttcatatct tgtttgggtt gtgggtgtaa gaatcacggt gagttatcac
      661 ttgacgtttc tagtgaattc ggcatgccac atatggggaa atcaagtttg gaacaccggt
      721 gatctctcca aaaataattt atgggtggca ttgtttacct ttggagaagg gtggcataac
      781 aatcatcatg cattcgagta ttcagctcgg tttggactaa aatggtggga gattgacctt
      841 tgttggtggt ttatacaatt tctcgaagct attgggttag ccaccaatgt taagtttccg
      901 agcccggctc ataagcttaa aagatcattt gcatctacta acaaattcaa gtga
//
LOCUS       XM_071830484            1571 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zeatin
            O-glucosyltransferase-like (LOC139840239), mRNA.
ACCESSION   XM_071830484
VERSION     XM_071830484.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1571
                     /gene="LOC139840239"
                     /note="zeatin O-glucosyltransferase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840239"
     CDS             3..1394
                     /gene="LOC139840239"
                     /codon_start=1
                     /product="zeatin O-glucosyltransferase-like"
                     /protein_id="XP_071686585.1"
                     /db_xref="GeneID:139840239"
                     /translation="MMNNGVVVVMVPFVAQGHLNQLLHLSRLLSSYNLPIQIVGSTTH
                     NRQAKLRVHGWNRTTNANIHFHEFTTPEFESPLPNPNASTKFPSHLIPSFKASINLRE
                     PFTNLLAELSPKTRRVIVVHDILMSSVVQDVVLFENVEAYAFHSASAFTTFSYVWEEK
                     GRPKLDDVESYMQLTNIPILQDLVPLDFLEFIMSHIDCKSFNSGNIHDTCKVFDGKFI
                     EFLSKEGLSGSNKQWAMGPFNPVSVNKDEEYVSKRHETLKWLDKQGQDSVIYVSFGTT
                     TTLSEEQIREIAIGLEKSGQKFIWVLRYADKGDIFKDEVRRLELPQGFEEQVEGKGLV
                     VREWAPQLEILAHSATGGFMSHCGWNSSMESITMGVPIIAWPMHSDQPRNATLITDVL
                     KIGVMVRDWESMSELVTSSSVENSIRKLMDYEEGNEIRNRARKLGEDVRKSMEEGGVT
                     HMEIESFVAHITR"
     misc_feature    <693..1388
                     /gene="LOC139840239"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(825..827,1068..1070,1074..1076,1080..1085)
                     /gene="LOC139840239"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     polyA_site      1571
                     /gene="LOC139840239"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acatgatgaa taatggtgta gttgtagtta tggtaccttt tgtagcacaa ggtcatctta
       61 accaacttct tcacctctct cgtcttctat cttcctacaa tctaccgatt caaatcgtcg
      121 gatccaccac gcacaaccgc caagcaaagc ttcgtgtcca cggttggaat cgaaccacaa
      181 acgcaaatat tcattttcat gaatttacaa cacccgaatt cgaatcacct ctcccaaacc
      241 ctaatgcttc aacaaaattc ccttcacacc ttatcccatc attcaaagca tcaataaatc
      301 tacgtgaacc atttacgaat ctattagccg aactttcacc aaaaactaga cgagttattg
      361 ttgttcatga cattttaatg agctccgttg tacaagatgt agttttattt gaaaacgttg
      421 aagcctatgc gtttcattct gcatcggctt ttactacgtt ttcgtacgtt tgggaagaga
      481 aaggaagacc taaattagat gatgttgaat cttatatgca acttacaaat attcctattc
      541 ttcaagatct tgtaccatta gattttcttg aatttattat gtctcatatt gattgtaaga
      601 gctttaattc gggcaatatt catgatactt gcaaagtttt tgatggtaag tttatcgaat
      661 tcctttcaaa agaaggactt tctggtagta ataaacaatg ggcaatgggt ccttttaatc
      721 cggtttctgt aaacaaagac gaagaatatg ttagcaaacg tcatgagaca ctaaaatggc
      781 ttgataaaca aggtcaagat tcggttattt acgtttcatt tgggaccaca acaacattat
      841 ccgaagagca aatccgagaa attgcaattg ggttagagaa aagtggacaa aagttcatat
      901 gggtgctacg atatgccgat aaaggcgata tctttaaaga tgaagttagg agacttgaat
      961 taccacaagg gtttgaagaa caagttgagg gaaaaggttt ggtggtaaga gaatgggccc
     1021 cacagttaga aatattggct cattcggcta cgggtggatt tatgagtcat tgtggatgga
     1081 actcgagtat ggagagtatt acaatgggag ttcctataat tgcgtggcct atgcattcgg
     1141 atcaaccaag aaacgcgacg ttaataactg atgtgctaaa gattggggta atggtacgtg
     1201 actgggagtc gatgagtgag ctagtaacgt cgtcaagtgt cgaaaatagt attcgaaagt
     1261 tgatggatta tgaagaagga aatgagataa ggaatagagc tagaaaactt ggtgaagatg
     1321 ttagaaaatc tatggaagaa ggtggtgtaa cacatatgga gatagaatca tttgttgctc
     1381 atattactag ataattagaa tataaatgat aatagttgtt tacttttcaa ttctagtgta
     1441 aaacaatatg tcttttctgc ttcagatttc agtaattcag ttgctttgcc acttggttgc
     1501 cagtccaatg acaaggggga ctgtttcctt cccatatttc ttgttttctt ccttaagatt
     1561 aagcttcaaa a
//
LOCUS       XM_071830485            1641 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zeatin
            O-glucosyltransferase-like (LOC139840240), mRNA.
ACCESSION   XM_071830485
VERSION     XM_071830485.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1641
                     /gene="LOC139840240"
                     /note="zeatin O-glucosyltransferase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139840240"
     CDS             73..1464
                     /gene="LOC139840240"
                     /codon_start=1
                     /product="zeatin O-glucosyltransferase-like"
                     /protein_id="XP_071686586.1"
                     /db_xref="GeneID:139840240"
                     /translation="MMNNGVVVVMVPFVAQGHLNQLLHLSRLLSSYNLPIQIVGSTTH
                     NRQAKLRVHGWNRTTNANIHFHEFTTPEFESPLPNPNASTKFPSHLIPSFKASINLRE
                     PFTNLLAELSPKTRRVIVVHDILMSSVVQDVVLFENVEAYAFHSASAFTTFSYVWEEK
                     GRPKLDDVESYMQLTNIPILQDLVPLDFLEFIMSHIDCKSFNSGNIHDTCKVFDGKFI
                     EFLSKEGLSGSNKQWAMGPFNPVSVNKDEEYVSKRHETLKWLDKQGQDSVIYVSFGTT
                     TTLSEEQIREIAIGLEKSGQKFIWVLRYADKGDIFKDEVRRLELPQGFEEQVEGKGLV
                     VREWAPQLEILAHSATGGFMSHCGWNSSMESITMGVPIIAWPMHSDQPRNATLITDVL
                     KIGVMVRDWESMSELVTSSSVENSIRKLMDYEEGNEIRNRARKLGEDVRKSMEEGGVT
                     HMEIESFVAHITR"
     misc_feature    <763..1458
                     /gene="LOC139840240"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(895..897,1138..1140,1144..1146,1150..1155)
                     /gene="LOC139840240"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     polyA_site      1641
                     /gene="LOC139840240"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcgatctctc aatcacatat attgaataaa ccttcatcca acatattcac acaaatcaaa
       61 ctcacacaaa acatgatgaa taatggtgta gttgtagtta tggtaccttt tgtagcacaa
      121 ggtcatctta accaacttct tcacctctct cgtcttcttt cttcctacaa tctaccgatt
      181 caaatcgtcg gatccaccac gcacaaccgc caagcaaagc ttcgtgtcca cggttggaat
      241 cgaaccacaa acgcaaatat tcattttcat gaatttacaa cacccgaatt cgaatcacct
      301 ctcccaaacc ctaatgcttc aacaaaattc ccttcacacc ttatcccatc attcaaagca
      361 tcaataaatc tacgtgaacc atttacgaat ctattagccg aactttcacc aaaaactaga
      421 cgagttattg ttgttcatga cattttaatg agctccgttg tacaagatgt agttttattt
      481 gaaaacgttg aagcctatgc gtttcattct gcatcggctt ttactacgtt ttcgtacgtt
      541 tgggaagaga aaggaagacc taaattagat gatgttgaat cttatatgca acttacaaat
      601 attcctattc ttcaagatct tgtaccatta gattttcttg aatttattat gtctcatatt
      661 gattgtaaga gctttaattc gggcaatatt catgatactt gcaaagtttt tgatggtaag
      721 tttatcgaat tcctttcaaa agaaggactt tctggtagta ataaacaatg ggcaatgggt
      781 ccttttaatc cggtttctgt aaacaaagac gaagaatatg ttagcaaacg tcatgagaca
      841 ctaaaatggc ttgataaaca aggtcaagat tcggttattt acgtttcatt tgggaccaca
      901 acaacattat ccgaagagca aatccgagaa attgcaattg ggttagagaa aagtggacaa
      961 aagttcatat gggtgctacg atatgccgat aaaggcgata tctttaaaga tgaagttagg
     1021 agacttgaat taccacaagg gtttgaagaa caagttgagg gaaaaggttt ggtggtaaga
     1081 gaatgggccc cacagttaga aatattggct cattcggcta cgggtggatt tatgagtcat
     1141 tgtggatgga actcgagtat ggagagtatt acaatgggag ttcctataat tgcgtggcct
     1201 atgcattcgg atcaaccaag aaacgcgacg ttaataactg atgtgctaaa gattggggta
     1261 atggtacgtg actgggagtc gatgagtgag ctagtaacgt cgtcaagtgt cgaaaatagt
     1321 attcgaaagt tgatggatta tgaagaagga aatgagataa ggaatagagc tagaaaactt
     1381 ggtgaagatg ttagaaaatc tatggaagaa ggtggtgtaa cacatatgga gatagaatca
     1441 tttgttgctc atattactag ataattagaa tataaatgat aatagttgtt tacttttcaa
     1501 ttctagtgta aaacaatatg tcttttctgc ttcagatttc agtaattcag ttgctttgcc
     1561 acttggttgc cagtccaatg acaaggggga ctgtttcctt cccatatttc ttgttttctt
     1621 ccttaagatt aagcttcaaa a
//
LOCUS       XM_071830486            1319 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor IIB-2-like (LOC139840241), mRNA.
ACCESSION   XM_071830486
VERSION     XM_071830486.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1319
                     /gene="LOC139840241"
                     /note="transcription initiation factor IIB-2-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139840241"
     CDS             133..1071
                     /gene="LOC139840241"
                     /codon_start=1
                     /product="transcription initiation factor IIB-2-like"
                     /protein_id="XP_071686587.1"
                     /db_xref="GeneID:139840241"
                     /translation="MADAYCSDCRKSTEVVFDHSAGDTVCSECGLVLESHSIDETSEW
                     RTFANESGDNDPVRVGGPTNVLLNDGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPD
                     RSLIMAFKTIATMSDRLGLVATIKDRANEIFKKVEDQKSSRGRNQDAILAACLYIACR
                     QEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCS
                     NLGMTNQTVKAAQESVKKSEEFDIRRSPISIAAAVIYIVTQLSDDKKPLKDVALATGV
                     AEGTIRNSYKDLYPHLVKIIPSWYAQEEDLKNLCSP"
     misc_feature    148..996
                     /gene="LOC139840241"
                     /note="Transcription initiation factor TFIIIB, Brf1
                     subunit/Transcription initiation factor TFIIB
                     [Transcription]; Region: SUA7; COG1405"
                     /db_xref="CDD:441015"
ORIGIN      
        1 tcccagtttc ttttgtttac tgcacccttc cgcacacctc ctgtcctcta cctacgtaaa
       61 gctaaatcta aaaccatata attaaacaca agccctaacc ctaaccctaa tttcaatcca
      121 agttcaaaac caatggccga cgcatactgt tccgactgcc gtaaatcaac cgaagtcgta
      181 ttcgatcatt ccgctggcga caccgtctgt tcagagtgtg gtctcgttct cgaatcacac
      241 tcaattgatg aaacatctga gtggcgtacg ttcgctaacg aatcaggtga taacgatcct
      301 gttcgtgttg gtggccctac taatgttctg cttaatgatg gtggtttatc gactgtgatt
      361 tcgaaaccta atggtgttac gagtgatttt ttgtcatcgt cgttaggacg ctggcagaat
      421 cgtggctcga atcctgatcg ctcgttgatt atggcgttta aaacgatcgc tactatgtct
      481 gatcggttgg gccttgttgc aacaattaag gatcgtgcta atgaaatatt taaaaaggtg
      541 gaggatcaaa aatccagtag agggaggaat caggatgcaa tcctggctgc ctgcctttat
      601 attgcttgtc gccaagaaga taagccaaga accgtaaagg aaatctgttc ggttgcaaat
      661 ggagcaacaa aaaaggaaat tggtcgggcg aaagaatata ttgtcaaaca actagagctt
      721 gagatgggac agtcagttga aatgggtacc attcatgctg gtgattttat gaggcgtttt
      781 tgttccaatc ttggtatgac caatcagaca gttaaagctg cccaagaatc tgtcaaaaag
      841 tccgaagagt ttgacataag gagaagtcca atctctattg ctgcagctgt tatatatatc
      901 gtaactcaac tatctgacga taagaagcct ctgaaagatg tagcacttgc aactggagtt
      961 gcagaaggaa caataagaaa ctcgtacaag gatctttatc ctcatttggt caaaattata
     1021 cctagttggt atgcccagga agaggatctt aagaacctct gcagcccttg aacgtctacg
     1081 cttaaaaaaa cgttttgtac ccagcaattt cggcttttga tgccttgatg agttcgattc
     1141 tgcaatggtt tattataaga aaaacaacaa aacatgatat catttcctta tcttctcccc
     1201 tgtcaaaaaa tttagctgag taggggagtt gttgtttctt gttttggacc ctctcttttt
     1261 caaacaaatg tgtaacttgt aaatgttatt tgctttacga gtatacttgt tcgatatac
//
LOCUS       XM_071830488            1823 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thioredoxin reductase
            NTRC-like (LOC139840242), transcript variant X1, mRNA.
ACCESSION   XM_071830488
VERSION     XM_071830488.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1823
                     /gene="LOC139840242"
                     /note="thioredoxin reductase NTRC-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840242"
     CDS             64..1653
                     /gene="LOC139840242"
                     /codon_start=1
                     /product="thioredoxin reductase NTRC-like isoform X1"
                     /protein_id="XP_071686589.1"
                     /db_xref="GeneID:139840242"
                     /translation="MASTAQIAIGISIGNNPRPTSAVAAAPCNLNSFLLGFTSRRATA
                     LRFNSVVNIAGGRFCSNRRSIRSSASSTEQPTSSAGTGVENLVIIGSGPAGYTAAIYA
                     ARANLKPVVFEGYQIGGVPGGQLMTTTEVENFPGFPEGITGPDLMDRMRRQAERWGAE
                     LYLEDVEFIDVNNRPFTVQSTDRKVKCHSIIVATGATARRLNLPREEEFWSRGISACA
                     ICDGASPLFKGQVLAVVGGGDTATEEAIYLTKYARHVHLLVRRDQMRASKAMQDRVLD
                     NPNITVHYNTETVDVVSNTKGQMSGIKVKKYDTGEESVLEAKGLFYGIGHNPNSQILE
                     GKVHLDSSGYILVEEGTAKTSLEGVFAAGDVQDHEWRQAITAAGSGCIAALSVERYLV
                     SNNLLIEFHQPHTEEVKKDLTPRDVQEGFDITLTKHKGQYALRKLYHESPRLICVLYT
                     SPTCGPCRTLKPILGKVIDEFDQNVHFVEIDIEEDPEVAEAANIMGTPCVQFFKNKEM
                     IRSVSGVKMKKEYREFIASNK"
     misc_feature    319..1236
                     /gene="LOC139840242"
                     /note="thioredoxin-disulfide reductase; Region:
                     TRX_reduct; TIGR01292"
                     /db_xref="CDD:273540"
     misc_feature    1351..1638
                     /gene="LOC139840242"
                     /note="TRX domain, novel NADPH thioredoxin reductase (NTR)
                     family; composed of fusion proteins found only in oxygenic
                     photosynthetic organisms containing both TRX and NTR
                     domains. The TRX domain functions as a protein disulfide
                     reductase via the reversible...; Region: TRX_NTR; cd02949"
                     /db_xref="CDD:239247"
     misc_feature    order(1423..1425,1432..1434)
                     /gene="LOC139840242"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239247"
     polyA_site      1823
                     /gene="LOC139840242"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttagttaaa ttcaaaagga tagtattgtt tggctattgt atggtccgaa acccaccatt
       61 ccaatggctt caactgctca aattgctatc ggaatttcaa tcggaaacaa tccacgccct
      121 acttcagccg tcgccgccgc tccttgcaat ctcaacagct tcttattagg tttcactagt
      181 cgacgcgcca ccgcacttcg tttcaactcc gtcgttaata tcgccggtgg tcgattctgc
      241 agtaaccgtc gttcgatacg ctcttcagct tcctctaccg agcaacctac ttcttcagca
      301 gggacaggtg ttgaaaattt ggtaatcata ggttcaggac cagctggtta cacagctgca
      361 atttatgcag ctcgtgctaa tttgaaacca gttgtatttg agggatatca aattggtggt
      421 gttcctggtg gacaactgat gaccaccacc gaagtcgaaa actttccagg ttttccggaa
      481 ggaattactg gtccggactt gatggatcgg atgaggcgac aagctgaacg ttggggagca
      541 gaactttatc tagaagatgt agagtttatt gatgtgaata atcgtccttt taccgtacaa
      601 agtaccgatc gtaaggtgaa atgccatagt attatagtag ctacaggagc aactgcacga
      661 agattaaatt tacctcgtga agaggagttt tggagtaggg gtattagtgc atgtgcaatt
      721 tgtgatggtg cttcaccact tttcaagggt caagttcttg cggttgttgg tggaggtgat
      781 acggctaccg aggaagcaat atatttgact aaatatgcta gacacgtgca tttactcgta
      841 cgtagggatc aaatgagggc gtcaaaagct atgcaagata gagttctcga taatccaaac
      901 atcacggtgc actacaacac agagacagtg gacgtcgtca gcaacactaa aggacaaatg
      961 tccggcataa aagtgaagaa gtatgatact ggcgaggaat cagtgttgga agctaaaggc
     1021 ctattttatg gaatcggtca taacccgaat agtcaaatat tggaaggcaa agttcacctt
     1081 gatagctccg gatatatttt ggtcgaagaa ggaaccgcaa agacttctct agaaggggtt
     1141 tttgctgctg gcgatgttca ggatcatgaa tggagacaag caataactgc agcgggatca
     1201 gggtgcattg ctgctctatc agtggagcga tatcttgtca gcaataatct gcttattgaa
     1261 tttcaccagc cgcatactga agaagttaag aaggatctca caccaagaga tgtgcaggaa
     1321 gggtttgaca tcacacttac taagcacaag ggccagtatg cattgcgtaa attgtaccat
     1381 gaaagtccta gacttatatg tgtattatat acatccccaa cttgtggtcc atgtaggaca
     1441 ttaaagccta ttcttggcaa ggtgatcgac gagtttgatc agaacgtcca ctttgttgaa
     1501 attgatattg aagaagaccc cgaggttgct gaggcagcga atattatggg tacaccatgt
     1561 gtccaatttt ttaagaacaa agaaatgatc aggagtgtat caggggtcaa aatgaagaag
     1621 gaatacagag aatttatcgc atcgaataaa tgagttttcc ctattcatct ttgtacaagt
     1681 gctacactag ctcatgttgt cattttgtga ttcaattttg atattccaaa ttggctagtt
     1741 aaatactgcc ttgtaatttt aactatttat ttactcttta tactgaaaat actttgcaat
     1801 atagatgttg agctcttcat aca
//
LOCUS       XM_071830489            1820 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thioredoxin reductase
            NTRC-like (LOC139840242), transcript variant X2, mRNA.
ACCESSION   XM_071830489
VERSION     XM_071830489.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1820
                     /gene="LOC139840242"
                     /note="thioredoxin reductase NTRC-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139840242"
     CDS             64..1650
                     /gene="LOC139840242"
                     /codon_start=1
                     /product="thioredoxin reductase NTRC-like isoform X2"
                     /protein_id="XP_071686590.1"
                     /db_xref="GeneID:139840242"
                     /translation="MASTAQIAIGISIGNNPRPTSAVAAAPCNLNSFLLGFTSRRATA
                     LRFNSVVNIAGGRFCSNRRSIRSSASSTEQPTSSGTGVENLVIIGSGPAGYTAAIYAA
                     RANLKPVVFEGYQIGGVPGGQLMTTTEVENFPGFPEGITGPDLMDRMRRQAERWGAEL
                     YLEDVEFIDVNNRPFTVQSTDRKVKCHSIIVATGATARRLNLPREEEFWSRGISACAI
                     CDGASPLFKGQVLAVVGGGDTATEEAIYLTKYARHVHLLVRRDQMRASKAMQDRVLDN
                     PNITVHYNTETVDVVSNTKGQMSGIKVKKYDTGEESVLEAKGLFYGIGHNPNSQILEG
                     KVHLDSSGYILVEEGTAKTSLEGVFAAGDVQDHEWRQAITAAGSGCIAALSVERYLVS
                     NNLLIEFHQPHTEEVKKDLTPRDVQEGFDITLTKHKGQYALRKLYHESPRLICVLYTS
                     PTCGPCRTLKPILGKVIDEFDQNVHFVEIDIEEDPEVAEAANIMGTPCVQFFKNKEMI
                     RSVSGVKMKKEYREFIASNK"
     misc_feature    316..1233
                     /gene="LOC139840242"
                     /note="thioredoxin-disulfide reductase; Region:
                     TRX_reduct; TIGR01292"
                     /db_xref="CDD:273540"
     misc_feature    1348..1635
                     /gene="LOC139840242"
                     /note="TRX domain, novel NADPH thioredoxin reductase (NTR)
                     family; composed of fusion proteins found only in oxygenic
                     photosynthetic organisms containing both TRX and NTR
                     domains. The TRX domain functions as a protein disulfide
                     reductase via the reversible...; Region: TRX_NTR; cd02949"
                     /db_xref="CDD:239247"
     misc_feature    order(1420..1422,1429..1431)
                     /gene="LOC139840242"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239247"
     polyA_site      1820
                     /gene="LOC139840242"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttagttaaa ttcaaaagga tagtattgtt tggctattgt atggtccgaa acccaccatt
       61 ccaatggctt caactgctca aattgctatc ggaatttcaa tcggaaacaa tccacgccct
      121 acttcagccg tcgccgccgc tccttgcaat ctcaacagct tcttattagg tttcactagt
      181 cgacgcgcca ccgcacttcg tttcaactcc gtcgttaata tcgccggtgg tcgattctgc
      241 agtaaccgtc gttcgatacg ctcttcagct tcctctaccg agcaacctac ttcttcaggg
      301 acaggtgttg aaaatttggt aatcataggt tcaggaccag ctggttacac agctgcaatt
      361 tatgcagctc gtgctaattt gaaaccagtt gtatttgagg gatatcaaat tggtggtgtt
      421 cctggtggac aactgatgac caccaccgaa gtcgaaaact ttccaggttt tccggaagga
      481 attactggtc cggacttgat ggatcggatg aggcgacaag ctgaacgttg gggagcagaa
      541 ctttatctag aagatgtaga gtttattgat gtgaataatc gtccttttac cgtacaaagt
      601 accgatcgta aggtgaaatg ccatagtatt atagtagcta caggagcaac tgcacgaaga
      661 ttaaatttac ctcgtgaaga ggagttttgg agtaggggta ttagtgcatg tgcaatttgt
      721 gatggtgctt caccactttt caagggtcaa gttcttgcgg ttgttggtgg aggtgatacg
      781 gctaccgagg aagcaatata tttgactaaa tatgctagac acgtgcattt actcgtacgt
      841 agggatcaaa tgagggcgtc aaaagctatg caagatagag ttctcgataa tccaaacatc
      901 acggtgcact acaacacaga gacagtggac gtcgtcagca acactaaagg acaaatgtcc
      961 ggcataaaag tgaagaagta tgatactggc gaggaatcag tgttggaagc taaaggccta
     1021 ttttatggaa tcggtcataa cccgaatagt caaatattgg aaggcaaagt tcaccttgat
     1081 agctccggat atattttggt cgaagaagga accgcaaaga cttctctaga aggggttttt
     1141 gctgctggcg atgttcagga tcatgaatgg agacaagcaa taactgcagc gggatcaggg
     1201 tgcattgctg ctctatcagt ggagcgatat cttgtcagca ataatctgct tattgaattt
     1261 caccagccgc atactgaaga agttaagaag gatctcacac caagagatgt gcaggaaggg
     1321 tttgacatca cacttactaa gcacaagggc cagtatgcat tgcgtaaatt gtaccatgaa
     1381 agtcctagac ttatatgtgt attatataca tccccaactt gtggtccatg taggacatta
     1441 aagcctattc ttggcaaggt gatcgacgag tttgatcaga acgtccactt tgttgaaatt
     1501 gatattgaag aagaccccga ggttgctgag gcagcgaata ttatgggtac accatgtgtc
     1561 caatttttta agaacaaaga aatgatcagg agtgtatcag gggtcaaaat gaagaaggaa
     1621 tacagagaat ttatcgcatc gaataaatga gttttcccta ttcatctttg tacaagtgct
     1681 acactagctc atgttgtcat tttgtgattc aattttgata ttccaaattg gctagttaaa
     1741 tactgccttg taattttaac tatttattta ctctttatac tgaaaatact ttgcaatata
     1801 gatgttgagc tcttcataca
//
LOCUS       XM_071830490            1430 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative methylesterase 12,
            chloroplastic (LOC139840243), mRNA.
ACCESSION   XM_071830490
VERSION     XM_071830490.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1430
                     /gene="LOC139840243"
                     /note="putative methylesterase 12, chloroplastic; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840243"
     CDS             149..1210
                     /gene="LOC139840243"
                     /codon_start=1
                     /product="putative methylesterase 12, chloroplastic"
                     /protein_id="XP_071686591.1"
                     /db_xref="GeneID:139840243"
                     /translation="MGNRFSCKTKVNNNGSKSSRRIGGGNRSQKKLHTDEELLHMQAL
                     SLAIQHHQSSQRFEGSMSRRIGSTSSRRRNNPVSDPTVTDPKQQKQSPEILENVETKK
                     IVLIHGEGFGAWCWYKSIAQLEESGMLPTAIDLTGSGIDLKDTNKVTTLEDYSKPLID
                     YLENLPEDDKVILVGHSIGGACVSYALEHFQQKISKAIFLCGTMVADGQKPFDVFADQ
                     LGSSELFMKESKFLIHGNGKDNPATGFMFEKQQMRGLYFNQSPAKDIALAMVSMRPIP
                     LGPIMQNLSLSKEKYGKGRRFYIQTLEDHFLSPDIQEKLVRENSPEGVFKIKGSDHCP
                     FFSKPQSLHKILLEIAQIA"
     misc_feature    458..1198
                     /gene="LOC139840243"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 acacactact ttaacctaat ttctctacga cacacacact aaacgcaatt gcaactcaca
       61 gctccaatta cttcaattta gagtcgaccc acaccttcaa attctttcaa tttcaatctg
      121 taaaatttaa tttgaattcc gttaagaaat gggtaatcga tttagttgca aaacgaaagt
      181 taataataat gggtcaaaaa gtagtaggcg aattgggggt ggaaatcgat cacaaaagaa
      241 actgcataca gatgaagaat tattgcatat gcaagcttta tcacttgcaa ttcaacatca
      301 tcaatcgtct caaagatttg aaggttcaat gtctcgccgg attggatcca ctagttcccg
      361 tcgccggaat aaccctgttt ctgatccgac ggtgactgac cctaaacagc aaaaacagtc
      421 acccgagatc ttggaaaatg ttgagaccaa gaaaattgtt ttgatacatg gagaaggatt
      481 tggagcatgg tgctggtaca aaagtattgc tcagttagag gaatcaggca tgcttccaac
      541 agccattgat ctgactggat ccggtatcga tttgaaggac acgaataaag tcactacact
      601 ggaggactat tcaaaaccac taattgatta tttggaaaac ttaccagaag atgataaggt
      661 aatcttagta ggacatagca ttggaggtgc ttgtgtttcg tatgcgttgg agcattttca
      721 acaaaagatt tccaaagcaa tctttttatg tggtactatg gtagctgatg gtcaaaagcc
      781 atttgatgtg tttgctgacc agttgggatc ttcagaactg tttatgaagg aatccaagtt
      841 cttaatacac ggaaatggaa aagacaatcc tgcaactgga ttcatgttcg agaagcaaca
      901 aatgcgtgga ttatatttca atcagtctcc tgcaaaggat attgctctag ctatggtttc
      961 aatgagaccc atcccactgg ggcccataat gcaaaaccta tcactatcca aagaaaaata
     1021 cgggaagggg cgtaggttct acattcaaac actcgaggat cacttcctct caccagacat
     1081 tcaagaaaaa ctcgtgagag aaaattcgcc agaaggtgtt tttaagatca aaggtagtga
     1141 tcattgccca ttcttctcta agccgcagtc gctgcacaaa attttgcttg agatcgctca
     1201 aatcgcatag caagatgaaa ccctttgagt tgatatgtac aacggttggt aatgatagtt
     1261 atcgagatat tttattgtta tattatttat tatttatata tttgtaactt tattaaactg
     1321 aaatgtttag agaggacaag tgttcatttg ttcatagttg gtggttataa tgaacattgg
     1381 tatatcatcg tctttcattt ttcatgtgta cgaggttttc gaataattaa
//
LOCUS       XM_071830491            2891 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides villin-2-like
            (LOC139840244), mRNA.
ACCESSION   XM_071830491
VERSION     XM_071830491.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2891
                     /gene="LOC139840244"
                     /note="villin-2-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 15 Proteins"
                     /db_xref="GeneID:139840244"
     CDS             1..2781
                     /gene="LOC139840244"
                     /codon_start=1
                     /product="villin-2-like"
                     /protein_id="XP_071686592.1"
                     /db_xref="GeneID:139840244"
                     /translation="MATAKALEPAFQGVGTRPGLEIWRIENFQPVPLPKSEYGKFYSG
                     DSYVVLQTSHGRGGAGVFTYAIHFWLGKDTSQDEAGTAAIKAVELDAILGGRAVQHRE
                     VQNHESEKFLSYFKPCIVPLEGGVKSGFKTPEEGEFETRLYICKGKRVVHMKQVPFSR
                     SVLNHDDVFILDTKDKIFQFNGTNSNIQERAKALEVIQVLKDKYHEGTCDVAIVDDGK
                     LQAEGDSGEFWVIFGGFAPIGKKVLTDDDIVPDRTPGKLYSIAGGQVGDPIDEYSKST
                     FETDKCYLLDCGAEVFVWVGRATQVDDRKAATKAAEEFVTSNNRPKATLVTRLIQGYE
                     THAFKSNFDSWPSSIAPAAENRGKVAENRGKVSALLKQQQGVGQKGKDKNAPAGEEVV
                     PPLLEGNGKLEVWSIDGGAKHPVASEDVGKFYCGDCYIVLYSYHSREKKEDFYLCYWI
                     GKNSTEEDQNTAAKLTASMFNSLKGRPVQGRIYQDNEPPQFIALFQPMVLFKGGLSSS
                     YKSYIAEQGLTDETYSPDSNAVIRILGTAVHNNKATQLEPVATSLNSYECFVIHTGSH
                     LYIWQGTQSTFEQHQWAAKIAEFVKPGVTAKYQKEGTESATFWLALGGKEDFTSNKVS
                     LETIRDPHLFAFSLYKGKFEIEEVYNFDQDDLLPEDILILDTHAEVFVWIGHAVDAKE
                     KKSALDLGQKYIEWAENLDGLSPRVPLYKVADGNEPAFFTTYFSWEPSKTLIHGNAFQ
                     KKITILFGAGNAEGHGNQDGGATQRASAMAALNSAFQSTPGGGKGGSSKGSSSAGSQR
                     RAAVAALSGVIADPKIDEPEPVAEPEKPEEAPEEAPEEPSEPAPEEDDGEPKVEIEED
                     ENGILSSQSTFTYEQVRVKSENPVPGIDLKRREAYLSVEEFESVLGMSKEEFYKLPKW
                     KQDQTKKKADLF"
     misc_feature    31..375
                     /gene="LOC139840244"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S1_like; cd11290"
                     /db_xref="CDD:200446"
     misc_feature    order(82..87,208..210,226..231,235..243,247..255,259..264,
                     295..297,301..303)
                     /gene="LOC139840244"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200446"
     misc_feature    415..699
                     /gene="LOC139840244"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S2_like; cd11289"
                     /db_xref="CDD:200445"
     misc_feature    766..1032
                     /gene="LOC139840244"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S3_like; cd11292"
                     /db_xref="CDD:200448"
     misc_feature    order(1015..1017,1030..1032)
                     /gene="LOC139840244"
                     /note="putative nucleotide binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:200448"
     misc_feature    1180..1485
                     /gene="LOC139840244"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S4_like; cd11293"
                     /db_xref="CDD:200449"
     misc_feature    order(1228..1233,1348..1350,1366..1371,1375..1383,
                     1387..1395,1399..1404,1435..1437,1441..1443)
                     /gene="LOC139840244"
                     /note="putative actin binding interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1456..1458
                     /gene="LOC139840244"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200449"
     misc_feature    1591..1845
                     /gene="LOC139840244"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S5_like; cd11288"
                     /db_xref="CDD:200444"
     misc_feature    1600..1602
                     /gene="LOC139840244"
                     /note="putative nucleotide binding residue [chemical
                     binding]; other site"
                     /db_xref="CDD:200444"
     misc_feature    1888..2181
                     /gene="LOC139840244"
                     /note="Gelsolin sub-domain 6-like domain found in
                     gelsolin, severin, villin, and related proteins; Region:
                     gelsolin_S6_like; cd11291"
                     /db_xref="CDD:200447"
     misc_feature    2671..2778
                     /gene="LOC139840244"
                     /note="Villin headpiece domain; Region: VHP; pfam02209"
                     /db_xref="CDD:460493"
ORIGIN      
        1 atggctactg caaaagcact tgaacctgca ttccaaggag ttggtacgag accagggctc
       61 gaaatatgga gaattgaaaa ttttcaacct gtacctttgc caaaatctga atatggtaaa
      121 ttttactctg gcgattcata cgttgtcttg cagacttctc atggtagggg aggtgcaggc
      181 gttttcacgt atgccataca cttttggctc ggtaaagata ctagccagga tgaagctgga
      241 acagcagcaa taaaagcagt ggagttagac gcgattctcg gtggacgtgc ggtgcaacat
      301 cgagaagtac aaaatcacga atccgaaaaa ttcttatcgt atttcaaacc gtgtatcgta
      361 ccacttgaag gtggtgttaa atctggattt aagacacctg aagaaggaga gtttgaaaca
      421 agattgtata tatgcaaagg aaaacgtgtt gttcatatga aacaggtccc gttttctcga
      481 tctgtgctga atcatgatga tgtgttcatt ttggacacta aagataagat ctttcaattc
      541 aatggtacaa attcaaatat tcaagaacgg gctaaagcat tggaggttat tcaagtgttg
      601 aaggacaaat atcatgaggg gacgtgtgat gttgctattg ttgacgatgg aaagttacaa
      661 gctgaaggag attcaggtga attttgggtc atctttggtg ggtttgctcc tattggcaaa
      721 aaggtcttaa cggacgatga tattgttcct gatagaactc ccggaaaact ttatagcatt
      781 gctggaggcc aggttgggga tccaattgat gaatattcaa aatcgacgtt tgaaaccgac
      841 aaatgctatc tactagactg tggtgcagag gtgtttgttt gggtgggtcg agcaacacag
      901 gtggatgata gaaaagctgc cacaaaagcc gctgaggagt ttgtcacaag taataatcgg
      961 ccaaaagcaa cccttgtaac ccgactaatt caaggttatg aaacacatgc attcaagtct
     1021 aactttgact catggccatc atcaattgca cctgcagctg aaaatagagg aaaagtagct
     1081 gaaaatagag gaaaagtgtc agccctttta aagcaacaac aaggtgttgg gcaaaaaggg
     1141 aaagataaaa atgctcccgc aggtgaggaa gttgttccgc cgttgcttga aggaaatggg
     1201 aaactcgagg tgtggtcgat cgatggtggg gccaagcacc cggtagccag tgaggacgtc
     1261 ggtaaattct actgtggaga ttgttacatt gttctttata gttaccattc tagagagaaa
     1321 aaggaagact tttatctttg ttattggatt ggaaaaaaca gcaccgagga ggatcaaaat
     1381 acagctgcta agctgaccgc atcgatgttc aactcgctga aagggagacc tgttcagggc
     1441 cgtatctacc aagacaatga accaccgcag tttattgctc tttttcagcc tatggttctt
     1501 tttaagggtg gattaagctc cagttataaa agctacattg ctgaacaagg attaactgat
     1561 gaaacctaca gtccagatag taatgcagtt attcgaatat tgggaactgc agtgcacaat
     1621 aataaagcca ctcaacttga acctgttgca acgtctttaa attcgtatga atgcttcgtt
     1681 atacacacgg gttcccatct atacatctgg caaggaaccc agagtacttt tgagcagcat
     1741 caatgggctg ccaaaattgc tgaatttgtg aagcctggag taacagcaaa atatcagaaa
     1801 gaaggaacgg aaagcgcaac gttttggctt gcacttggag gaaaagaaga ttttacgagc
     1861 aacaaagtat cactcgagac tattagagat cctcatttgt ttgcattttc cctctataaa
     1921 ggaaaatttg agattgaaga agtttacaac tttgatcaag atgatttgtt gcccgaggat
     1981 atcttgatat tagatacgca tgcagaggtt ttcgtttgga ttggtcatgc ggttgacgca
     2041 aaggagaaga aaagcgctct cgatcttggc cagaaataca ttgaatgggc tgaaaatctt
     2101 gacggattgt ccccacgtgt tccattatac aaagttgcag acggaaatga gcctgccttc
     2161 ttcacaacat atttctcatg ggaaccttca aaaacattaa tccacggaaa cgcattccaa
     2221 aagaagatta cgatactgtt tggggcaggc aatgctgagg gccatgggaa tcaagatggt
     2281 ggagcaacgc aacgagcgtc agccatggcg gctttaaact ctgcttttca atcgaccccg
     2341 ggtggtggta aaggtggttc atcaaaagga tcgagcagtg cgggttcaca gagacgggct
     2401 gcggttgctg ctttatcggg agttattgcg gaccccaaaa tcgatgaacc cgaacccgtt
     2461 gccgaacctg aaaagcctga agaagcccct gaagaagcac ccgaggaacc atctgaacca
     2521 gctccagaag aagatgatgg agaaccgaag gtagaaatcg aggaggacga aaacggtatt
     2581 ttatccagtc aatctacttt cacctatgaa caagtcaggg ttaagtccga aaaccccgtt
     2641 cctggaatcg accttaagag gagagaggct tacctttcgg ttgaagaatt tgagtcggtt
     2701 cttgggatgt caaaagaaga gttttataaa ttgccaaaat ggaagcaaga tcaaaccaag
     2761 aaaaaagctg atctctttta aacgcgccga ataataaact ttaaacacca ataacaacgc
     2821 cttttcaaca ttcgtttaat tctttttcac tttcacacga tcaatctccc ttgatacatg
     2881 gcctttttct t
//
LOCUS       XM_071830492            1350 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840245), mRNA.
ACCESSION   XM_071830492
VERSION     XM_071830492.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1350
                     /gene="LOC139840245"
                     /note="uncharacterized LOC139840245; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840245"
     CDS             196..1110
                     /gene="LOC139840245"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686593.1"
                     /db_xref="GeneID:139840245"
                     /translation="MGVSVNGATDFSSEMEVDAFRRLFPLRFHERHLIESVRPDARPL
                     TKARDTSLALGAVASADGSALAKIGCTTMLAAIKMEVMTPAKETPDEGCIAIEFHMPA
                     ICSPIVRPGRPAEAAPVVSKQLSDTILSSGMIDLKELSLVSGKAAWMAYLDVYCLDAD
                     GALFDAALLASVAAFSHLQIPLVSLNDDGRVVIVSKENEGYNVKNKPVNEEKRKLKLR
                     NIPFGLTCVLHKKYILADPTAEEESIMETMITIVLDSSYQLVSLNKPGGAGLAYESVV
                     QDCVALSRQRVKEVQGILNEAISDMDTD"
     misc_feature    256..1077
                     /gene="LOC139840245"
                     /note="RRP43 subunit of eukaryotic exosome; Region:
                     RNase_PH_RRP43; cd11369"
                     /db_xref="CDD:206774"
     misc_feature    order(370..372,376..378,421..423,427..435,478..480,
                     484..486,499..501,550..552,559..561,571..573,637..639,
                     652..654,667..669,721..729,853..855,970..1005,1021..1023,
                     1033..1035)
                     /gene="LOC139840245"
                     /note="hexamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:206774"
ORIGIN      
        1 aaatcccttc caaagttcca atacacaacc cgacccgaag cacctattgg gccactccga
       61 tgaacccgcc ttattttaaa caccggctga cgcacaaaac cgataaaaac actatttctt
      121 attcttcttc cgctttcgac tgtgaaacaa ccacatctgt ttccacacga ccacacaccc
      181 atctttcaag agaaaatggg ggtttctgtg aatggtgcaa ctgatttttc atcagagatg
      241 gaagttgatg ctttcagaag actttttccg ttacgatttc acgaacggca tttgatcgaa
      301 tccgtacggc ctgatgctag accacttact aaagctagag atacttcctt ggctttaggt
      361 gcggtagcat ctgcagatgg atcagcatta gcaaagatag gctgcactac tatgttagct
      421 gccattaaaa tggaagttat gacacctgca aaggaaacac ctgatgaagg ctgcatagcg
      481 attgagttcc acatgcctgc aatttgttct cctattgtaa ggcctggcag acctgccgaa
      541 gctgcacctg tagtgtcaaa gcagttatct gatactatct taagttctgg gatgattgat
      601 ttaaaagagt tgtcattggt cagtggcaaa gctgcttgga tggcatacct ggatgtatat
      661 tgtttggatg ctgatggtgc tctatttgat gctgctttac ttgcttcagt ggctgcattt
      721 tcccatttgc aaattccgtt agtgtcattg aatgatgatg gaagagttgt aattgtttcc
      781 aaagaaaatg aggggtataa cgtaaaaaat aaaccggtga acgaggagaa aaggaaactt
      841 aaattaagga acattccatt tgggttaaca tgcgtacttc acaaaaaata catcctggct
      901 gatccaacgg ccgaggaaga atcgatcatg gaaactatga taacgattgt attggattca
      961 tcttatcaat tggtgtctct taacaaacca ggtggtgctg gtcttgctta tgagtccgtg
     1021 gtccaggatt gtgttgcact gtcaagacaa agagtgaaag aggttcaggg aatcctgaat
     1081 gaagccattt cggatatgga tacggattag cttttaccaa aaagaaaaaa agaaaaaaaa
     1141 atcaacaaaa gaaactttct cgttgcattt ttttttgttc cttcatttta gcttctgacg
     1201 ggtaaatcgt ttctctaaaa ttactattta cgaagttggt taattgctaa ggatacagga
     1261 tcttctctaa agctctataa aaggcttttg agtggaattg tggcatgtgg tttgtataca
     1321 ctttctctaa gttaactatg ctttgcaata
//
LOCUS       XR_011757285             361 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840247), ncRNA.
ACCESSION   XR_011757285
VERSION     XR_011757285.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..361
                     /gene="LOC139840247"
                     /note="uncharacterized LOC139840247; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840247"
     ncRNA           1..361
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840247"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840247"
ORIGIN      
        1 aaatctctat cttccccatt actaaatcta tctcagttcc attaaactat caactccact
       61 ttctctccat aaaaatttat tacggagtac aaggttaaac aatataacct aatatcaaat
      121 acggagtatc aaggtttgat tcaagttgac ttgcttattg attatatctc aatcgttaag
      181 tttcatattc ttcatttcag ttaatctcag ttaatatcca aggacagaag agctagagct
      241 tcacaccgac catcacaagg agagtcatca caacaagttg ctgaaagacg acgactatta
      301 gccgaccgtc ccattcttcc tggtattaac gttgttgctc aaggtggttt ttccgcgtac
      361 t
//
LOCUS       XM_071830493             729 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nascent
            polypeptide-associated complex subunit beta-like (LOC139840248),
            mRNA.
ACCESSION   XM_071830493
VERSION     XM_071830493.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..729
                     /gene="LOC139840248"
                     /note="nascent polypeptide-associated complex subunit
                     beta-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 30 Proteins"
                     /db_xref="GeneID:139840248"
     CDS             75..566
                     /gene="LOC139840248"
                     /codon_start=1
                     /product="nascent polypeptide-associated complex subunit
                     beta-like"
                     /protein_id="XP_071686594.1"
                     /db_xref="GeneID:139840248"
                     /translation="MNVEKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLK
                     RIGVNSIPQIEEVNIFKDEHVIQFLNPKVQAAVGANTWVVSGTPQTKNLQDVLPSILN
                     QLGPDNLENLKRLAEQFQKQGVGAGDATAAMNTIQEDDDEVPELVAGETFEAAAAEEG
                     QKS"
     misc_feature    84..431
                     /gene="LOC139840248"
                     /note="basal transcription factor BTF3; Region: NAC_BTF3;
                     cd22055"
                     /db_xref="CDD:409234"
     misc_feature    138..152
                     /gene="LOC139840248"
                     /note="ribosome binding motif; other site"
                     /db_xref="CDD:409234"
     misc_feature    order(228..257,270..272,276..278,312..332,336..338,
                     378..386)
                     /gene="LOC139840248"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:409234"
     polyA_site      729
                     /gene="LOC139840248"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatctatcca ccctccgcct tcactctatt tttctgttat ccggccacct ctaatttctc
       61 ccagcaacgc caagatgaat gtagaaaagc tacagaagat ggctggtgct gttcgcactg
      121 gtggaaaggg tagcgttaga agaaagaaga aggccgtgca taagacaacc accaccgatg
      181 acaaaaggct gcaaagcact ttgaaaagaa taggggtaaa ctcaatacca caaattgagg
      241 aagtaaacat ttttaaggat gaacatgtaa tccagttctt gaaccccaaa gttcaagctg
      301 ctgttggtgc caacacttgg gttgttagtg gtactcctca aacaaagaat ctgcaagatg
      361 ttcttccaag tattcttaac caattggggc ctgataactt ggagaacttg aaaaggttag
      421 cagagcagtt ccaaaagcag ggtgtgggtg ctggtgatgc gacagctgct atgaatacaa
      481 tacaagagga tgatgatgaa gtcccagaac ttgtggcagg tgaaacgttt gaagctgctg
      541 ctgctgagga aggacagaaa tcctagattt caaatggacg attttactct ttacatttgc
      601 agtgttatgt ggtctttttt gactttataa agaagaaaaa agtagcaacg ttcatggtga
      661 ttttgtcgtt tttgctttca gtgtatcaac tctcaatgct gcaacgattg gcgtattgtt
      721 gaatttttt
//
LOCUS       XM_071830494            2220 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent protein
            kinase 7-like (LOC139840250), mRNA.
ACCESSION   XM_071830494
VERSION     XM_071830494.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2220
                     /gene="LOC139840250"
                     /note="calcium-dependent protein kinase 7-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 76 Proteins"
                     /db_xref="GeneID:139840250"
     CDS             268..1854
                     /gene="LOC139840250"
                     /codon_start=1
                     /product="calcium-dependent protein kinase 7-like"
                     /protein_id="XP_071686595.1"
                     /db_xref="GeneID:139840250"
                     /translation="MGNCCAVPSTTDESEIKKGKNKPNPFASDNGGSIPATRDGYKPY
                     VLENPTGNQIEQTYVLGKELGRGEFGVTYLCTDKVSGDVYACKSISKKKLRTRVDIED
                     VRREVEIMKHLPAHPNIVSLKDTYEDDSAVHLVMELCEGGELFDRIVAKGHYTERAAA
                     GVIRTIVEVIQTCHKHGVMHRDLKPENFLYENKKETAALKAIDFGLSVFFRPGERFNE
                     IVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIKSVVD
                     FKRDPWPMVSDNAKDLVKKMLNPDPKLRLTAQEVLDHPWIQNAKKAPNVSLGETVKAR
                     LKQFSVMNKLKKRALRVIAEHLSAEEVAGIKQGFDLMDTNKQGKINIVELKDGLQKLG
                     QQIPDADLQMLMDAGDVDKDGYLNYGEFVAISVHLRKMGNDDHLKDAFAFFDQNKSGY
                     IEIDELREALADELEPNNEDVISAIIHDVDTDKDGKISYEEFTAMMKAGTDWRKASRQ
                     YSRERYNNLSLKLFKDGSMH"
     misc_feature    439..1212
                     /gene="LOC139840250"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; Region: STKc_CAMK; cd05117"
                     /db_xref="CDD:270687"
     misc_feature    order(457..471,481..483,520..522,526..528,625..627,
                     673..684,694..696,700..702,808..813,817..819,823..828,
                     832..834,871..876,883..885,925..939,943..945)
                     /gene="LOC139840250"
                     /note="active site"
                     /db_xref="CDD:270687"
     misc_feature    order(457..468,481..483,520..522,526..528,625..627,
                     673..684,694..696,823..828,832..834,871..876)
                     /gene="LOC139840250"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(469..471,694..696,700..702,808..813,817..819,
                     823..825,883..885,925..939,943..945)
                     /gene="LOC139840250"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270687"
     misc_feature    order(871..897,925..939)
                     /gene="LOC139840250"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270687"
     misc_feature    1321..1755
                     /gene="LOC139840250"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
     polyA_site      2220
                     /gene="LOC139840250"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caaaattcct actttcatcg tcttcttcaa aaccctttcc tttattgttc catttttgtt
       61 caccccatct atcaatcaac aatctttctt cttttttttt ttcaagtttt catcaaaatc
      121 tgatttcttg aaaacaccct ttcaggttcc ggatcaaaga tctgattttt aaggtaaatc
      181 tgattgaccc acttcaaccc ttttgttaat ttattgtaat atacaatacc catattttat
      241 ttttttgtat attgatcgta tatctatatg ggtaactgct gtgctgtacc atctactact
      301 gatgaatccg agatcaaaaa agggaaaaat aaaccaaacc catttgcttc agataatggt
      361 gggtcaatcc cagcaactag agatgggtat aaaccttatg ttttagaaaa tcctactgga
      421 aatcaaattg agcagactta tgttcttggt aaagaattag gtagaggtga atttggggtt
      481 acttatttat gtactgataa agtaagtgga gatgtttatg cttgtaaatc gatatcgaaa
      541 aagaagttaa gaactagagt tgatattgag gatgttagga gagaagttga gatcatgaaa
      601 catttgcctg ctcatcctaa tattgtgagt ctgaaagata cttatgaaga tgatagtgct
      661 gttcatttgg ttatggagtt gtgcgagggc ggagaattgt tcgatcggat cgttgctaaa
      721 ggtcattaca ctgaaagagc agctgccggt gttattcgca ccatagttga ggttattcag
      781 acgtgccaca aacacggtgt tatgcaccgt gatcttaaac ctgagaactt tttgtatgaa
      841 aacaagaaag aaaccgctgc cttgaaagct attgatttcg gattgtctgt tttcttcagg
      901 ccaggtgaga gattcaatga gattgtaggc agtccatact acatggctcc tgaagtccta
      961 aaacgaaact atggacccga ggttgatgtc tggagcgctg gcgtcatcct ttacatattg
     1021 ctttgtgggg tcccaccatt ttgggcggaa accgagcaag gggttgcaca ggctatcata
     1081 aaatctgtgg ttgattttaa aagagatcca tggccaatgg tgtctgataa tgcaaaggat
     1141 cttgtcaaga agatgctcaa tcctgaccca aagttgcgtc ttactgctca agaagtactc
     1201 gatcatccat ggatacagaa cgccaaaaag gctccaaatg tttctttagg tgaaaccgtt
     1261 aaagcaagac tcaagcaatt ctcagtgatg aacaaactca agaagagagc tttaagggta
     1321 attgccgaac atttatctgc cgaagaagtg gcgggcataa aacagggatt cgatttgatg
     1381 gatactaaca aacaaggtaa gataaatatc gttgagttga aagatggctt gcaaaagctt
     1441 ggtcaacaaa tcccggatgc cgatcttcag atgcttatgg atgctggtga cgttgacaaa
     1501 gacgggtact tgaactacgg agaattcgtt gcaatttcag ttcacttgag aaagatgggt
     1561 aacgatgatc atcttaaaga tgcttttgcg ttcttcgatc aaaataaaag cggatacata
     1621 gagatcgatg agttaaggga agctttagcc gatgaacttg aacccaataa cgaagacgtt
     1681 atttctgcca ttattcatga tgtcgatact gacaaggacg gcaaaattag ttatgaggag
     1741 tttacagcaa tgatgaaggc aggaacagat tggaggaaag catctagaca atactcacga
     1801 gagcgttaca ataaccttag tttgaagtta tttaaagacg gatcaatgca ctaataaact
     1861 gataattaga gacgataaac aaaaatctgg taacaaaaca cgattattgt tctatatatc
     1921 atgggcattt tcagccattg taatattttg ttgtggcctt attcatttca tttttaaatt
     1981 tgagacatgt atctctttga gagttaggcc aaatttccca tgtgttgaat gtgttatatt
     2041 tttcttttca tgagtctgag attatggggg agttttagaa gggtttattc ttttaaggta
     2101 ctgagtattg tttatggttg taaatatgta tgttgttggc acttcatgct tatgtaatta
     2161 ctcagaagta taaagatttt aagggttgta agttacaatg taatgatatt gcgctttcta
//
LOCUS       XM_071830495             666 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein uS10y (LOC139840251), transcript variant X1, mRNA.
ACCESSION   XM_071830495
VERSION     XM_071830495.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..666
                     /gene="LOC139840251"
                     /note="small ribosomal subunit protein uS10y; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139840251"
     CDS             104..469
                     /gene="LOC139840251"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS10y"
                     /protein_id="XP_071686596.1"
                     /db_xref="GeneID:139840251"
                     /translation="MAYAMKPTKPGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRG
                     AKDKKLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQ
                     ITSITIEPGVEVEVTIADS"
     misc_feature    119..457
                     /gene="LOC139840251"
                     /note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
                     cl00314"
                     /db_xref="CDD:469716"
     polyA_site      666
                     /gene="LOC139840251"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcgacctag ggtttcaatt ccattgaaca tcacaactgc aactacgcag aaccgcagtt
       61 atcgtctccg gaatcatcac tcaatctcca cagaagctag aagatggcat acgcgatgaa
      121 accgacaaag ccagggctag aagagccaca agaacagatt cacaagatta ggattactct
      181 ttcatcaaag aatgttaaga atcttgagaa agtgtgtgct gatttggttc gtggtgctaa
      241 ggacaagaag ttgagggtca agggtcctgt tagaatgcct acaaaggttc ttaacatcac
      301 aaccaggaag tccccttgtg gagaaggaac aaacacatgg gacagattcg agcttcgtgt
      361 ccacaagcgt gttattgatc ttttcagctc acctgatgtt gtgaagcaaa tcacctccat
      421 cactattgaa cctggtgttg aggttgaggt caccattgct gactcttaga tagtcaccaa
      481 tcttgtcctt ttatattatc atgttctatt ttgggtaata actacttttt ctcatgtaat
      541 agtttcaatt gatgtagtat taataccttt acaattttga attttttgtt tggaagaaag
      601 tcagagttgt gtttaatttt tgtctttctt ttttctttaa aatgaaatga aatgcatttt
      661 tcatac
//
LOCUS       XM_071830496             676 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein uS10y (LOC139840251), transcript variant X2, mRNA.
ACCESSION   XM_071830496
VERSION     XM_071830496.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..676
                     /gene="LOC139840251"
                     /note="small ribosomal subunit protein uS10y; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139840251"
     CDS             114..479
                     /gene="LOC139840251"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS10y"
                     /protein_id="XP_071686597.1"
                     /db_xref="GeneID:139840251"
                     /translation="MAYAMKPTKPGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRG
                     AKDKKLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQ
                     ITSITIEPGVEVEVTIADS"
     misc_feature    129..467
                     /gene="LOC139840251"
                     /note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
                     cl00314"
                     /db_xref="CDD:469716"
     polyA_site      676
                     /gene="LOC139840251"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgacctagg gtttcaattc cattgaacat cacaactgca actacgcaga accgcagtta
       61 tcgtctccgg aatcatcact caatctccac aggttatttt ccgaagctag aagatggcat
      121 acgcgatgaa accgacaaag ccagggctag aagagccaca agaacagatt cacaagatta
      181 ggattactct ttcatcaaag aatgttaaga atcttgagaa agtgtgtgct gatttggttc
      241 gtggtgctaa ggacaagaag ttgagggtca agggtcctgt tagaatgcct acaaaggttc
      301 ttaacatcac aaccaggaag tccccttgtg gagaaggaac aaacacatgg gacagattcg
      361 agcttcgtgt ccacaagcgt gttattgatc ttttcagctc acctgatgtt gtgaagcaaa
      421 tcacctccat cactattgaa cctggtgttg aggttgaggt caccattgct gactcttaga
      481 tagtcaccaa tcttgtcctt ttatattatc atgttctatt ttgggtaata actacttttt
      541 ctcatgtaat agtttcaatt gatgtagtat taataccttt acaattttga attttttgtt
      601 tggaagaaag tcagagttgt gtttaatttt tgtctttctt ttttctttaa aatgaaatga
      661 aatgcatttt tcatac
//
LOCUS       XM_071830498            1881 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone deacetylase 5-like
            (LOC139840252), transcript variant X1, mRNA.
ACCESSION   XM_071830498
VERSION     XM_071830498.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1881
                     /gene="LOC139840252"
                     /note="histone deacetylase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840252"
     CDS             345..914
                     /gene="LOC139840252"
                     /codon_start=1
                     /product="histone deacetylase 5-like isoform X1"
                     /protein_id="XP_071686599.1"
                     /db_xref="GeneID:139840252"
                     /translation="MFVFTSVSLSSMLRVCFMLTIIFRWLDHLMLQLCYKVYNICHTF
                     MGISTLRKKFSNLNNSTSQYTMQVREELSVYWSVLAEKLPEKLTSKVTPRLQIYSSQS
                     DEEYDDGPNILSEDDATIPLSKLKFSEDGTDKFDTSSSQAWRSELSKIDIWYASFGSN
                     MSESRFRCYIQGGQWIMSLFPDFARVAFG"
ORIGIN      
        1 tctccttttc aattatcaca tcccatttca tctcggctga acataacaat ttctgcatta
       61 gggttcttag tgttgttgcg aattagggtt tttagtgact gttttggttg ttgatcggtc
      121 aacgcgtgaa actgaaacgc tagggtttct ttttcatcta ttgcgtttag ccaaaaataa
      181 agattcgtca tctgatgttt gaatgagggt cgattaagat ggaagccttt gagataaagc
      241 atattccggt agcgttcaag gttgtagtag aaacatcaag aggctgaaac taaaatggtg
      301 gttgaagttg acgtttttgg tttttcacct cgctatcaga tgagatgttt gtatttactt
      361 ccgtttcctt atcttcaatg ttacgtgtgt gctttatgtt gacaattatt ttccgttggt
      421 tggaccatct aatgttacag ttatgctaca aggtctacaa catatgtcat acctttatgg
      481 ggatttcgac attgagaaag aaatttagca atcttaacaa ttctacctca caatatacaa
      541 tgcaggttcg tgaggaactg agcgtatatt ggtcggtact tgcagagaag ttacctgaga
      601 agttgaccag taaagtaaca cctcgactac agatatatag ctcgcagtct gatgaagaat
      661 atgatgatgg tccgaatata ttatcagagg atgatgctac aataccactt tcaaaactga
      721 aatttagtga agatggtaca gataaatttg ataccagttc ttctcaagcc tggagatcag
      781 agttgtcaaa aattgatatt tggtatgcct cttttggatc aaacatgagc gagtcaagat
      841 ttcgctgtta tatacaaggt ggccagtgga ttatgagttt gtttccagat tttgccaggg
      901 ttgcatttgg atagcacttg aaggttatct ttatgtatgt ttgggaccgc aagatcatat
      961 attgagtatt tgtaaaattt ggctcctatt tagtggtcat ctaatatcat acatggacat
     1021 aatgcgaaat aagaagtaaa acaaaggtag taatgggaat tgtttgtctt atgtgggctt
     1081 ttgcttgctg aggtcgtacg tgatagtggc taagtgctgg gaactgtgac accgatttgt
     1141 ccgtgtttca aatgaatgga tgggttagta aaatatgtat accgattgtt attcattgaa
     1201 gacagtatat aacacattct gttatgaaca ctccgagaac tgcacgtaaa gtcaggagcc
     1261 accgcaccct gatttaagta taatctaagt tctaaaactc aatccctgat ttaagttatg
     1321 ttttgttgat atgtagtgtt tataacaatt ccaactatat taatttgcaa agaggagcca
     1381 ccgcaccttt ctctactata atgtataaga gattaaggta agtttctaaa agtactacat
     1441 gaatattttt aagcactaag acgatattat tgttttaata gctgattgta tcctgattgt
     1501 gtttacatgt gattagtttt ctttttatat attttttcag gttgtgcaaa gttacgtttc
     1561 gacgtcaaat tagagactat tgttctgtat tctttatggt gtcttaatcg tgggattaac
     1621 acgtggactg aaaaactcag aaaagttgtc agaggtttcg catcctctat tgccttacgt
     1681 atcatcgtta ttcagctcag cgtagtctga attattggta aaaggtaatg ttattcctct
     1741 ttcaatttta gtaattattt aattctcatt atttttatac cctttttggt ggttgttttt
     1801 tttttttttt ctaattgtgg tatgaattga ggaaagaatc cattagcaaa aggtgagtaa
     1861 gtggatggta atgttggaga t
//
LOCUS       XM_071830499            1098 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone deacetylase 5-like
            (LOC139840252), transcript variant X2, mRNA.
ACCESSION   XM_071830499
VERSION     XM_071830499.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1098
                     /gene="LOC139840252"
                     /note="histone deacetylase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840252"
     CDS             345..908
                     /gene="LOC139840252"
                     /codon_start=1
                     /product="histone deacetylase 5-like isoform X2"
                     /protein_id="XP_071686600.1"
                     /db_xref="GeneID:139840252"
                     /translation="MFVFTSVSLSSMLRVCFMLTIIFRWLDHLMLQLCYKVYNICHTF
                     MGISTLRKKFSNLNNSTSQYTMQVREELSVYWSVLAEKLPEKLTSKVTPRLQIYSSQS
                     DEEYDDGPNILSEDDATIPLSKLKFSEDGTDKFDTSSSQAWRSELSKIDIWYASFGSN
                     MSESRFRCYIQGGQVIYDIMLLIILYF"
ORIGIN      
        1 tctccttttc aattatcaca tcccatttca tctcggctga acataacaat ttctgcatta
       61 gggttcttag tgttgttgcg aattagggtt tttagtgact gttttggttg ttgatcggtc
      121 aacgcgtgaa actgaaacgc tagggtttct ttttcatcta ttgcgtttag ccaaaaataa
      181 agattcgtca tctgatgttt gaatgagggt cgattaagat ggaagccttt gagataaagc
      241 atattccggt agcgttcaag gttgtagtag aaacatcaag aggctgaaac taaaatggtg
      301 gttgaagttg acgtttttgg tttttcacct cgctatcaga tgagatgttt gtatttactt
      361 ccgtttcctt atcttcaatg ttacgtgtgt gctttatgtt gacaattatt ttccgttggt
      421 tggaccatct aatgttacag ttatgctaca aggtctacaa catatgtcat acctttatgg
      481 ggatttcgac attgagaaag aaatttagca atcttaacaa ttctacctca caatatacaa
      541 tgcaggttcg tgaggaactg agcgtatatt ggtcggtact tgcagagaag ttacctgaga
      601 agttgaccag taaagtaaca cctcgactac agatatatag ctcgcagtct gatgaagaat
      661 atgatgatgg tccgaatata ttatcagagg atgatgctac aataccactt tcaaaactga
      721 aatttagtga agatggtaca gataaatttg ataccagttc ttctcaagcc tggagatcag
      781 agttgtcaaa aattgatatt tggtatgcct cttttggatc aaacatgagc gagtcaagat
      841 ttcgctgtta tatacaaggt ggccaggtaa tttatgatat tatgcttcta atcatattat
      901 atttctagga gttgagcaaa ttatgcaaaa tatatatcag aaattacctg atatcatgcc
      961 ttttgcgtta gtctaaactt gcttaacatg atctttgtta gtgctttttg ttaaatgaat
     1021 ttattttgaa tttataaact ggagcatgtt gtgctatcca tacttcattt tagataatag
     1081 ttccatgtaa aaagttga
//
LOCUS       XM_071830500            1859 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone deacetylase 5-like
            (LOC139840252), transcript variant X3, mRNA.
ACCESSION   XM_071830500
VERSION     XM_071830500.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1859
                     /gene="LOC139840252"
                     /note="histone deacetylase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840252"
     CDS             345..899
                     /gene="LOC139840252"
                     /codon_start=1
                     /product="histone deacetylase 5-like isoform X3"
                     /protein_id="XP_071686601.1"
                     /db_xref="GeneID:139840252"
                     /translation="MFVFTSVSLSSMLRVCFMLTIIFRWLDHLMLQLCYKVYNICHTF
                     MGISTLRKKFSNLNNSTSQYTMQVREELSVYWSVLAEKLPEKLTSKVTPRLQIYSSQS
                     DEEYDDGPNILSEDDATIPLSKLKFSEDGTDKFDTSSSQAWRSELSKIDIWYASFGSN
                     MSESRFRCYIQGGQILPGLHLDST"
ORIGIN      
        1 tctccttttc aattatcaca tcccatttca tctcggctga acataacaat ttctgcatta
       61 gggttcttag tgttgttgcg aattagggtt tttagtgact gttttggttg ttgatcggtc
      121 aacgcgtgaa actgaaacgc tagggtttct ttttcatcta ttgcgtttag ccaaaaataa
      181 agattcgtca tctgatgttt gaatgagggt cgattaagat ggaagccttt gagataaagc
      241 atattccggt agcgttcaag gttgtagtag aaacatcaag aggctgaaac taaaatggtg
      301 gttgaagttg acgtttttgg tttttcacct cgctatcaga tgagatgttt gtatttactt
      361 ccgtttcctt atcttcaatg ttacgtgtgt gctttatgtt gacaattatt ttccgttggt
      421 tggaccatct aatgttacag ttatgctaca aggtctacaa catatgtcat acctttatgg
      481 ggatttcgac attgagaaag aaatttagca atcttaacaa ttctacctca caatatacaa
      541 tgcaggttcg tgaggaactg agcgtatatt ggtcggtact tgcagagaag ttacctgaga
      601 agttgaccag taaagtaaca cctcgactac agatatatag ctcgcagtct gatgaagaat
      661 atgatgatgg tccgaatata ttatcagagg atgatgctac aataccactt tcaaaactga
      721 aatttagtga agatggtaca gataaatttg ataccagttc ttctcaagcc tggagatcag
      781 agttgtcaaa aattgatatt tggtatgcct cttttggatc aaacatgagc gagtcaagat
      841 ttcgctgtta tatacaaggt ggccagattt tgccagggtt gcatttggat agcacttgaa
      901 ggttatcttt atgtatgttt gggaccgcaa gatcatatat tgagtatttg taaaatttgg
      961 ctcctattta gtggtcatct aatatcatac atggacataa tgcgaaataa gaagtaaaac
     1021 aaaggtagta atgggaattg tttgtcttat gtgggctttt gcttgctgag gtcgtacgtg
     1081 atagtggcta agtgctggga actgtgacac cgatttgtcc gtgtttcaaa tgaatggatg
     1141 ggttagtaaa atatgtatac cgattgttat tcattgaaga cagtatataa cacattctgt
     1201 tatgaacact ccgagaactg cacgtaaagt caggagccac cgcaccctga tttaagtata
     1261 atctaagttc taaaactcaa tccctgattt aagttatgtt ttgttgatat gtagtgttta
     1321 taacaattcc aactatatta atttgcaaag aggagccacc gcacctttct ctactataat
     1381 gtataagaga ttaaggtaag tttctaaaag tactacatga atatttttaa gcactaagac
     1441 gatattattg ttttaatagc tgattgtatc ctgattgtgt ttacatgtga ttagttttct
     1501 ttttatatat tttttcaggt tgtgcaaagt tacgtttcga cgtcaaatta gagactattg
     1561 ttctgtattc tttatggtgt cttaatcgtg ggattaacac gtggactgaa aaactcagaa
     1621 aagttgtcag aggtttcgca tcctctattg ccttacgtat catcgttatt cagctcagcg
     1681 tagtctgaat tattggtaaa aggtaatgtt attcctcttt caattttagt aattatttaa
     1741 ttctcattat ttttataccc tttttggtgg ttgttttttt ttttttttct aattgtggta
     1801 tgaattgagg aaagaatcca ttagcaaaag gtgagtaagt ggatggtaat gttggagat
//
LOCUS       XM_071830501            1780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone deacetylase 5-like
            (LOC139840252), transcript variant X4, mRNA.
ACCESSION   XM_071830501
VERSION     XM_071830501.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1780
                     /gene="LOC139840252"
                     /note="histone deacetylase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840252"
     CDS             295..813
                     /gene="LOC139840252"
                     /codon_start=1
                     /product="histone deacetylase 5-like isoform X4"
                     /protein_id="XP_071686602.1"
                     /db_xref="GeneID:139840252"
                     /translation="MVVEVDVFGFSPRYQLCYKVYNICHTFMGISTLRKKFSNLNNST
                     SQYTMQVREELSVYWSVLAEKLPEKLTSKVTPRLQIYSSQSDEEYDDGPNILSEDDAT
                     IPLSKLKFSEDGTDKFDTSSSQAWRSELSKIDIWYASFGSNMSESRFRCYIQGGQWIM
                     SLFPDFARVAFG"
ORIGIN      
        1 tctccttttc aattatcaca tcccatttca tctcggctga acataacaat ttctgcatta
       61 gggttcttag tgttgttgcg aattagggtt tttagtgact gttttggttg ttgatcggtc
      121 aacgcgtgaa actgaaacgc tagggtttct ttttcatcta ttgcgtttag ccaaaaataa
      181 agattcgtca tctgatgttt gaatgagggt cgattaagat ggaagccttt gagataaagc
      241 atattccggt agcgttcaag gttgtagtag aaacatcaag aggctgaaac taaaatggtg
      301 gttgaagttg acgtttttgg tttttcacct cgctatcagt tatgctacaa ggtctacaac
      361 atatgtcata cctttatggg gatttcgaca ttgagaaaga aatttagcaa tcttaacaat
      421 tctacctcac aatatacaat gcaggttcgt gaggaactga gcgtatattg gtcggtactt
      481 gcagagaagt tacctgagaa gttgaccagt aaagtaacac ctcgactaca gatatatagc
      541 tcgcagtctg atgaagaata tgatgatggt ccgaatatat tatcagagga tgatgctaca
      601 ataccacttt caaaactgaa atttagtgaa gatggtacag ataaatttga taccagttct
      661 tctcaagcct ggagatcaga gttgtcaaaa attgatattt ggtatgcctc ttttggatca
      721 aacatgagcg agtcaagatt tcgctgttat atacaaggtg gccagtggat tatgagtttg
      781 tttccagatt ttgccagggt tgcatttgga tagcacttga aggttatctt tatgtatgtt
      841 tgggaccgca agatcatata ttgagtattt gtaaaatttg gctcctattt agtggtcatc
      901 taatatcata catggacata atgcgaaata agaagtaaaa caaaggtagt aatgggaatt
      961 gtttgtctta tgtgggcttt tgcttgctga ggtcgtacgt gatagtggct aagtgctggg
     1021 aactgtgaca ccgatttgtc cgtgtttcaa atgaatggat gggttagtaa aatatgtata
     1081 ccgattgtta ttcattgaag acagtatata acacattctg ttatgaacac tccgagaact
     1141 gcacgtaaag tcaggagcca ccgcaccctg atttaagtat aatctaagtt ctaaaactca
     1201 atccctgatt taagttatgt tttgttgata tgtagtgttt ataacaattc caactatatt
     1261 aatttgcaaa gaggagccac cgcacctttc tctactataa tgtataagag attaaggtaa
     1321 gtttctaaaa gtactacatg aatattttta agcactaaga cgatattatt gttttaatag
     1381 ctgattgtat cctgattgtg tttacatgtg attagttttc tttttatata ttttttcagg
     1441 ttgtgcaaag ttacgtttcg acgtcaaatt agagactatt gttctgtatt ctttatggtg
     1501 tcttaatcgt gggattaaca cgtggactga aaaactcaga aaagttgtca gaggtttcgc
     1561 atcctctatt gccttacgta tcatcgttat tcagctcagc gtagtctgaa ttattggtaa
     1621 aaggtaatgt tattcctctt tcaattttag taattattta attctcatta tttttatacc
     1681 ctttttggtg gttgtttttt tttttttttc taattgtggt atgaattgag gaaagaatcc
     1741 attagcaaaa ggtgagtaag tggatggtaa tgttggagat
//
LOCUS       XM_071830502            1082 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone deacetylase 5-like
            (LOC139840252), transcript variant X5, mRNA.
ACCESSION   XM_071830502
VERSION     XM_071830502.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1082
                     /gene="LOC139840252"
                     /note="histone deacetylase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840252"
     CDS             345..812
                     /gene="LOC139840252"
                     /codon_start=1
                     /product="uncharacterized protein isoform X5"
                     /protein_id="XP_071686603.1"
                     /db_xref="GeneID:139840252"
                     /translation="MFVFTSVSLSSMLRVCFMLTIIFRWLDHLMLQLCYKVYNICHTF
                     MGISTLRKKFSNLNNSTSQYTMQVREELSVYWSVLAEKLPEKLTSKVTPRLQIYSSQS
                     DEEYDDGPNILSEDDATIPLSKLKFSEDGTVLLKPGDQSCQKLIFGMPLLDQT"
ORIGIN      
        1 tctccttttc aattatcaca tcccatttca tctcggctga acataacaat ttctgcatta
       61 gggttcttag tgttgttgcg aattagggtt tttagtgact gttttggttg ttgatcggtc
      121 aacgcgtgaa actgaaacgc tagggtttct ttttcatcta ttgcgtttag ccaaaaataa
      181 agattcgtca tctgatgttt gaatgagggt cgattaagat ggaagccttt gagataaagc
      241 atattccggt agcgttcaag gttgtagtag aaacatcaag aggctgaaac taaaatggtg
      301 gttgaagttg acgtttttgg tttttcacct cgctatcaga tgagatgttt gtatttactt
      361 ccgtttcctt atcttcaatg ttacgtgtgt gctttatgtt gacaattatt ttccgttggt
      421 tggaccatct aatgttacag ttatgctaca aggtctacaa catatgtcat acctttatgg
      481 ggatttcgac attgagaaag aaatttagca atcttaacaa ttctacctca caatatacaa
      541 tgcaggttcg tgaggaactg agcgtatatt ggtcggtact tgcagagaag ttacctgaga
      601 agttgaccag taaagtaaca cctcgactac agatatatag ctcgcagtct gatgaagaat
      661 atgatgatgg tccgaatata ttatcagagg atgatgctac aataccactt tcaaaactga
      721 aatttagtga agatggtaca gttcttctca agcctggaga tcagagttgt caaaaattga
      781 tatttggtat gcctcttttg gatcaaacat gagcgagtca agatttcgct gttatataca
      841 aggtggccag gtaatttatg atattatgct tctaatcata ttatatttct aggagttgag
      901 caaattatgc aaaatatata tcagaaatta cctgatatca tgccttttgc gttagtctaa
      961 acttgcttaa catgatcttt gttagtgctt tttgttaaat gaatttattt tgaatttata
     1021 aactggagca tgttgtgcta tccatacttc attttagata atagttccat gtaaaaagtt
     1081 ga
//
LOCUS       XM_071830503             866 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone deacetylase 5-like
            (LOC139840252), transcript variant X6, mRNA.
ACCESSION   XM_071830503
VERSION     XM_071830503.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..866
                     /gene="LOC139840252"
                     /note="histone deacetylase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840252"
     CDS             345..812
                     /gene="LOC139840252"
                     /codon_start=1
                     /product="uncharacterized protein isoform X5"
                     /protein_id="XP_071686604.1"
                     /db_xref="GeneID:139840252"
                     /translation="MFVFTSVSLSSMLRVCFMLTIIFRWLDHLMLQLCYKVYNICHTF
                     MGISTLRKKFSNLNNSTSQYTMQVREELSVYWSVLAEKLPEKLTSKVTPRLQIYSSQS
                     DEEYDDGPNILSEDDATIPLSKLKFSEDGTVLLKPGDQSCQKLIFGMPLLDQT"
ORIGIN      
        1 tctccttttc aattatcaca tcccatttca tctcggctga acataacaat ttctgcatta
       61 gggttcttag tgttgttgcg aattagggtt tttagtgact gttttggttg ttgatcggtc
      121 aacgcgtgaa actgaaacgc tagggtttct ttttcatcta ttgcgtttag ccaaaaataa
      181 agattcgtca tctgatgttt gaatgagggt cgattaagat ggaagccttt gagataaagc
      241 atattccggt agcgttcaag gttgtagtag aaacatcaag aggctgaaac taaaatggtg
      301 gttgaagttg acgtttttgg tttttcacct cgctatcaga tgagatgttt gtatttactt
      361 ccgtttcctt atcttcaatg ttacgtgtgt gctttatgtt gacaattatt ttccgttggt
      421 tggaccatct aatgttacag ttatgctaca aggtctacaa catatgtcat acctttatgg
      481 ggatttcgac attgagaaag aaatttagca atcttaacaa ttctacctca caatatacaa
      541 tgcaggttcg tgaggaactg agcgtatatt ggtcggtact tgcagagaag ttacctgaga
      601 agttgaccag taaagtaaca cctcgactac agatatatag ctcgcagtct gatgaagaat
      661 atgatgatgg tccgaatata ttatcagagg atgatgctac aataccactt tcaaaactga
      721 aatttagtga agatggtaca gttcttctca agcctggaga tcagagttgt caaaaattga
      781 tatttggtat gcctcttttg gatcaaacat gagcgagtca agatttcgct gttatataca
      841 aggtggccag tggattatga gtttgt
//
LOCUS       XM_071830504            1928 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone deacetylase 5-like
            (LOC139840252), transcript variant X7, mRNA.
ACCESSION   XM_071830504
VERSION     XM_071830504.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1928
                     /gene="LOC139840252"
                     /note="histone deacetylase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840252"
     CDS             524..961
                     /gene="LOC139840252"
                     /codon_start=1
                     /product="histone deacetylase 5-like isoform X6"
                     /protein_id="XP_071686605.1"
                     /db_xref="GeneID:139840252"
                     /translation="MGISTLRKKFSNLNNSTSQYTMQVREELSVYWSVLAEKLPEKLT
                     SKVTPRLQIYSSQSDEEYDDGPNILSEDDATIPLSKLKFSEDGTDKFDTSSSQAWRSE
                     LSKIDIWYASFGSNMSESRFRCYIQGGQWIMSLFPDFARVAFG"
ORIGIN      
        1 tctccttttc aattatcaca tcccatttca tctcggctga acataacaat ttctgcatta
       61 gggttcttag tgttgttgcg aattagggtt tttagtgact gttttggttg ttgatcggtc
      121 aacgcgtgaa actgaaacgc tagggtttct ttttcatcta ttgcgtttag ccaaaaataa
      181 agattcgtca tctgatgttt gaatgagggt cgattaagat ggaagccttt gagataaagc
      241 atattccggt agcgttcaag gttgtagtag aaacatcaag aggctgaaac taaaatggtg
      301 gttgaagttg acgtttttgg tttttcacct cgctatcaga tgagatgttt gtatttactt
      361 ccgtttcctt atcttcaatg ttacgtgtgt gctttatgtt gacaattatt ttccgttggt
      421 tggaccatct aatgttacag atgtctttcc cctgtttcca ttttacaaaa ttcgctccct
      481 actacagtta tgctacaagg tctacaacat atgtcatacc tttatgggga tttcgacatt
      541 gagaaagaaa tttagcaatc ttaacaattc tacctcacaa tatacaatgc aggttcgtga
      601 ggaactgagc gtatattggt cggtacttgc agagaagtta cctgagaagt tgaccagtaa
      661 agtaacacct cgactacaga tatatagctc gcagtctgat gaagaatatg atgatggtcc
      721 gaatatatta tcagaggatg atgctacaat accactttca aaactgaaat ttagtgaaga
      781 tggtacagat aaatttgata ccagttcttc tcaagcctgg agatcagagt tgtcaaaaat
      841 tgatatttgg tatgcctctt ttggatcaaa catgagcgag tcaagatttc gctgttatat
      901 acaaggtggc cagtggatta tgagtttgtt tccagatttt gccagggttg catttggata
      961 gcacttgaag gttatcttta tgtatgtttg ggaccgcaag atcatatatt gagtatttgt
     1021 aaaatttggc tcctatttag tggtcatcta atatcataca tggacataat gcgaaataag
     1081 aagtaaaaca aaggtagtaa tgggaattgt ttgtcttatg tgggcttttg cttgctgagg
     1141 tcgtacgtga tagtggctaa gtgctgggaa ctgtgacacc gatttgtccg tgtttcaaat
     1201 gaatggatgg gttagtaaaa tatgtatacc gattgttatt cattgaagac agtatataac
     1261 acattctgtt atgaacactc cgagaactgc acgtaaagtc aggagccacc gcaccctgat
     1321 ttaagtataa tctaagttct aaaactcaat ccctgattta agttatgttt tgttgatatg
     1381 tagtgtttat aacaattcca actatattaa tttgcaaaga ggagccaccg cacctttctc
     1441 tactataatg tataagagat taaggtaagt ttctaaaagt actacatgaa tatttttaag
     1501 cactaagacg atattattgt tttaatagct gattgtatcc tgattgtgtt tacatgtgat
     1561 tagttttctt tttatatatt ttttcaggtt gtgcaaagtt acgtttcgac gtcaaattag
     1621 agactattgt tctgtattct ttatggtgtc ttaatcgtgg gattaacacg tggactgaaa
     1681 aactcagaaa agttgtcaga ggtttcgcat cctctattgc cttacgtatc atcgttattc
     1741 agctcagcgt agtctgaatt attggtaaaa ggtaatgtta ttcctctttc aattttagta
     1801 attatttaat tctcattatt tttataccct ttttggtggt tgtttttttt tttttttcta
     1861 attgtggtat gaattgagga aagaatccat tagcaaaagg tgagtaagtg gatggtaatg
     1921 ttggagat
//
LOCUS       XM_071830505            1827 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histone deacetylase 5-like
            (LOC139840252), transcript variant X8, mRNA.
ACCESSION   XM_071830505
VERSION     XM_071830505.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1827
                     /gene="LOC139840252"
                     /note="histone deacetylase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840252"
     CDS             423..860
                     /gene="LOC139840252"
                     /codon_start=1
                     /product="histone deacetylase 5-like isoform X6"
                     /protein_id="XP_071686606.1"
                     /db_xref="GeneID:139840252"
                     /translation="MGISTLRKKFSNLNNSTSQYTMQVREELSVYWSVLAEKLPEKLT
                     SKVTPRLQIYSSQSDEEYDDGPNILSEDDATIPLSKLKFSEDGTDKFDTSSSQAWRSE
                     LSKIDIWYASFGSNMSESRFRCYIQGGQWIMSLFPDFARVAFG"
ORIGIN      
        1 tctccttttc aattatcaca tcccatttca tctcggctga acataacaat ttctgcatta
       61 gggttcttag tgttgttgcg aattagggtt tttagtgact gttttggttg ttgatcggtc
      121 aacgcgtgaa actgaaacgc tagggtttct ttttcatcta ttgcgtttag ccaaaaataa
      181 agattcgtca tctgatgttt gaatgagggt cgattaagat ggaagccttt gagataaagc
      241 atattccggt agcgttcaag gttgtagtag aaacatcaag aggctgaaac taaaatggtg
      301 gttgaagttg acgtttttgg tttttcacct cgctatcaga tgtctttccc ctgtttccat
      361 tttacaaaat tcgctcccta ctacagttat gctacaaggt ctacaacata tgtcatacct
      421 ttatggggat ttcgacattg agaaagaaat ttagcaatct taacaattct acctcacaat
      481 atacaatgca ggttcgtgag gaactgagcg tatattggtc ggtacttgca gagaagttac
      541 ctgagaagtt gaccagtaaa gtaacacctc gactacagat atatagctcg cagtctgatg
      601 aagaatatga tgatggtccg aatatattat cagaggatga tgctacaata ccactttcaa
      661 aactgaaatt tagtgaagat ggtacagata aatttgatac cagttcttct caagcctgga
      721 gatcagagtt gtcaaaaatt gatatttggt atgcctcttt tggatcaaac atgagcgagt
      781 caagatttcg ctgttatata caaggtggcc agtggattat gagtttgttt ccagattttg
      841 ccagggttgc atttggatag cacttgaagg ttatctttat gtatgtttgg gaccgcaaga
      901 tcatatattg agtatttgta aaatttggct cctatttagt ggtcatctaa tatcatacat
      961 ggacataatg cgaaataaga agtaaaacaa aggtagtaat gggaattgtt tgtcttatgt
     1021 gggcttttgc ttgctgaggt cgtacgtgat agtggctaag tgctgggaac tgtgacaccg
     1081 atttgtccgt gtttcaaatg aatggatggg ttagtaaaat atgtataccg attgttattc
     1141 attgaagaca gtatataaca cattctgtta tgaacactcc gagaactgca cgtaaagtca
     1201 ggagccaccg caccctgatt taagtataat ctaagttcta aaactcaatc cctgatttaa
     1261 gttatgtttt gttgatatgt agtgtttata acaattccaa ctatattaat ttgcaaagag
     1321 gagccaccgc acctttctct actataatgt ataagagatt aaggtaagtt tctaaaagta
     1381 ctacatgaat atttttaagc actaagacga tattattgtt ttaatagctg attgtatcct
     1441 gattgtgttt acatgtgatt agttttcttt ttatatattt tttcaggttg tgcaaagtta
     1501 cgtttcgacg tcaaattaga gactattgtt ctgtattctt tatggtgtct taatcgtggg
     1561 attaacacgt ggactgaaaa actcagaaaa gttgtcagag gtttcgcatc ctctattgcc
     1621 ttacgtatca tcgttattca gctcagcgta gtctgaatta ttggtaaaag gtaatgttat
     1681 tcctctttca attttagtaa ttatttaatt ctcattattt ttataccctt tttggtggtt
     1741 gttttttttt ttttttctaa ttgtggtatg aattgaggaa agaatccatt agcaaaaggt
     1801 gagtaagtgg atggtaatgt tggagat
//
LOCUS       XM_071830506            2498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger CCCH
            domain-containing protein 30-like (LOC139840253), mRNA.
ACCESSION   XM_071830506
VERSION     XM_071830506.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2498
                     /gene="LOC139840253"
                     /note="zinc finger CCCH domain-containing protein 30-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 24 Proteins"
                     /db_xref="GeneID:139840253"
     CDS             145..2070
                     /gene="LOC139840253"
                     /codon_start=1
                     /product="zinc finger CCCH domain-containing protein
                     30-like"
                     /protein_id="XP_071686607.1"
                     /db_xref="GeneID:139840253"
                     /translation="MSQLNVETGDSFATLLELAANNDIEGFTQSIESNPSVFDKVGLW
                     YGRQKGSKQMVLEHRTPLMVAAMYGSIDVLKLILSQSNADVNQLCGVDKTTALHCAAS
                     GGSVNAVEIVKLLLPAGADPNLIDANGLRPVDVIVVSPKLQDMKKTLEVLLGVDDEIT
                     VLPSPEPEVKVAGDDDGEAEAESELDLVFSPKTPGFNDAKREYPIDPSLPDIKNSIYS
                     TDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGTCR
                     RGDMCEYAHGVFECWLHPAQYRTRLCKDGSGCNRRVCFFAHRQDELRPLFVSTGSAVP
                     SPRSTSSPNAMDFATAMSMMTAPGPFTPPMSLSGNGMSNMNWAQPNVPSLNLPGSNLQ
                     TSRLRSSLNARDIASDQDLNLHLYNELSRQQRAILTPTKLDDIFAAENSSPRYSDQSV
                     FSPRHNSAVFNQFQQQQSLLSPINTNFSPKNGPFSVQSPRNVDPISPMSSRVSILARE
                     NLHQFRSLSARELGSRSGSILGSDADPWSKWGSSDDQADLGVNVNDFEKVCSSSSFEN
                     ALNNGEEPDLSWVQSLVKETPQETTEKLATSGGSGGSAGSSGDGRGGGQIEQVDQSTL
                     SAWIEQMQLDQLVAQQN"
     misc_feature    <154..672
                     /gene="LOC139840253"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    313..414
                     /gene="LOC139840253"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    418..522
                     /gene="LOC139840253"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    928..1002
                     /gene="LOC139840253"
                     /note="zinc finger; Region: ZnF_C3H1; smart00356"
                     /db_xref="CDD:214632"
ORIGIN      
        1 ttatttcttc tgatcaacaa aaccccttca taaaaatcac aactttttga ttatattatc
       61 actctttcac atctttgatt attagatctg aaaacccatt aaaaccctcc gatgactaag
      121 taaatcaaat ttccgtaagt aaacatgagc cagttaaatg ttgaaaccgg ggattctttt
      181 gctactttgc ttgaacttgc tgcgaataac gacattgaag gcttcacgca atcaatcgag
      241 tccaacccat ctgtttttga taaagtagga ttatggtatg ggcgtcaaaa agggtcgaaa
      301 caaatggttc ttgaacacag aactccatta atggtggcag ctatgtatgg tagcattgat
      361 gttttgaagc tgatcttatc acaatcaaat gctgatgtga atcagttgtg tggtgttgat
      421 aaaactactg ctcttcattg tgctgcttct ggtgggtccg taaatgcggt tgaaattgtt
      481 aaattgttat tgcctgcggg tgctgacccg aacttgattg atgctaacgg acttagacct
      541 gtagatgtta ttgtggtttc accgaagtta caagatatga aaaagaccct tgaagtgctt
      601 cttggagtcg atgatgaaat taccgttttg ccctcacccg aacctgaagt taaagttgca
      661 ggtgacgatg acggtgaagc tgaagccgaa tcagaattgg atttagtttt ttcgcccaag
      721 acgccgggtt ttaatgatgc caaaagagaa tacccgattg atccatcatt acccgacatc
      781 aagaatagca tttactcaac cgatgagttc cgtatgtact cgtttaagat ccgtccgtgt
      841 tctcgagcct attctcatga ttggaccgaa tgcccttttg ttcatccagg cgaaaacgca
      901 cgtagacggg acccacgaaa gtaccattat agttgtgtcc catgtcccga tttcagaaaa
      961 gggacctgtc gaagaggtga catgtgcgaa tacgctcacg gtgttttcga gtgttggcta
     1021 catcccgccc aataccggac ccgcctttgt aaagacgggt cgggttgtaa ccgacgcgtg
     1081 tgtttctttg ctcacagaca agatgagctt cgcccgttat tcgtgtcaac gggctccgcg
     1141 gtcccgtcac ctcggtcaac ttctagtccg aatgcaatgg attttgctac cgccatgagc
     1201 atgatgaccg cgcctggccc ctttacacca cccatgtctc tgtctggaaa tggcatgtcg
     1261 aatatgaatt gggctcaacc gaatgtgcct tcgttgaatc taccgggaag taatcttcaa
     1321 acgagccgtt taagatcatc gcttaatgct agagacattg cgtccgatca agatttgaat
     1381 cttcatcttt ataacgagtt atcgagacaa caacgggcga ttttaactcc aactaaactc
     1441 gatgacattt ttgcagccga aaactcgtct ccaagatatt ctgatcagtc ggttttttct
     1501 ccgagacata attcggcggt ttttaatcag tttcagcaac agcagagttt gttgtcaccg
     1561 attaatacta atttctctcc aaaaaatgga cctttttcgg ttcaatctcc tagaaacgtt
     1621 gaccctattt cacccatgag ctctcgggtt tcgattctgg ctcgtgagaa cctacatcag
     1681 tttagaagtt tgagcgcacg tgagcttggg tcaagatccg gtagtatttt gggctctgat
     1741 gctgacccat ggtcaaaatg gggttcaagt gatgaccaag ctgatttggg tgttaatgtt
     1801 aatgattttg agaaagtttg tagctcatcg tcgtttgaaa atgccttgaa taacggggag
     1861 gagcctgatc tgtcatgggt tcaatcactt gtgaaagaaa cgcctcaaga gacgacggaa
     1921 aagctggcga cgtctggcgg ctcaggtggc agtgcaggat cttccggtga tggccgtggc
     1981 ggtgggcaga ttgaacaagt tgatcaatct acattgagtg cgtggattga gcaaatgcaa
     2041 cttgatcaac tcgtcgcgca acagaattaa aatcttgaaa aggaggtaaa taacaaagtt
     2101 ccgattttcg attttgattt tttggattgg atgaaagttg gcaacaaaag gaggatcaaa
     2161 cacaagattc tctcctggat tatttttatt tttaatttaa ttataataat acaagcagaa
     2221 gttagaaatt gtagaacaag taaagttcat agatcataat ctggggatac ttctgaaaaa
     2281 gtagcccagt ttaggaaatc ataaaaagaa ataatggata ttaattttaa tgtttatgaa
     2341 cagtaaattt ccctcctttg cccatttcct ttagaaagtg caagttgttc atgtaatcat
     2401 gtataagtgc agatcaagtt ttttggcctt tatagagatt aaatggtaag gtgaggatca
     2461 tgataactga tgtggaaatg atttgaaatt taatgtta
//
LOCUS       XM_071830507            1408 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like
            (LOC139840254), mRNA.
ACCESSION   XM_071830507
VERSION     XM_071830507.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1408
                     /gene="LOC139840254"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     2-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 19 Proteins"
                     /db_xref="GeneID:139840254"
     CDS             62..1210
                     /gene="LOC139840254"
                     /codon_start=1
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     2-like"
                     /protein_id="XP_071686608.1"
                     /db_xref="GeneID:139840254"
                     /translation="MAIAAAVVIVPIGLLFFFSGLIVNLIQAIIYVTVRPFSKSLFRR
                     INRMVAELLWLELVWIVDWWAGVKVRLYTDPETLKMMGKEHALVIANHKSDIDWLIGW
                     VFAQRSGCLGSCLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGLQRLKD
                     YPQPFWLALFVEGTRFTKAKLLAAQEYASSMGLPVPRNVLIPRTKGFVTSVSEMRSFA
                     PAVIDMTVAIPRNSTPPTMLRLFKGQSSVIDVRVKRHLMKDLPESDEAVAQWCKDIFV
                     AKDALLDKHKVDDAFTDSELVDIGRPLKSLVVVVSWTCLLVFGTFKLLQWSNLLSSWK
                     GLTFTAIGLAIVTILMQILIQFSQAERSTPARVVPTGPSNGVVQEKKD"
     misc_feature    62..1177
                     /gene="LOC139840254"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase;
                     Region: PLN02380"
                     /db_xref="CDD:178006"
     polyA_site      1408
                     /gene="LOC139840254"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acacacacac actcaaaaac acacactaaa aaggcacaca ctttgagtgt gttttctact
       61 tatggcaatt gcagcagcag ttgttatcgt tccaatcggc cttctgttct tcttttctgg
      121 actcatcgtt aatctcattc aggcaattat atatgtgact gtacggccat tttcaaagag
      181 tctgtttaga aggattaaca gaatggttgc tgaactgttg tggcttgaac ttgtgtggat
      241 cgttgattgg tgggctggag ttaaggttag actgtacact gatcccgaga ctctaaagat
      301 gatgggtaag gagcatgctc ttgtcattgc aaatcataaa agtgacattg attggctgat
      361 tggttgggtg ttcgctcaga gatcagggtg tcttggtagc tgtcttgctg tcatgaagaa
      421 atcatcaaaa tttcttcctg tcattggttg gtccatgtgg ttctccgagt atctctttct
      481 tgagagaagt tgggctaaag atgaaagtac tttaaagtca ggtcttcaac gcctaaaaga
      541 ctaccctcaa ccgttttggt tagccctttt tgttgagggg actcgattca ctaaagcaaa
      601 gcttttagca gctcaagaat atgcatcttc aatgggtttg cctgttccta gaaatgttct
      661 aattcctcga actaagggat ttgtgacatc agtgagtgag atgagatctt ttgctcctgc
      721 agttatcgat atgacggttg caattcccag gaattcaact ccaccaacaa tgctcaggct
      781 ttttaaaggg cagtcttctg tgattgatgt cagagttaag cgccatttga tgaaggattt
      841 gccagaatca gatgaagccg ttgcacaatg gtgtaaagat atttttgttg ccaaggatgc
      901 tctattggac aaacataaag tagatgacgc gtttactgat tcagaacttg ttgacattgg
      961 tcgaccatta aagtctcttg tggttgtcgt ttcatggaca tgccttcttg tattcgggac
     1021 tttcaagttg ttgcaatggt caaatctact atcttcatgg aagggtctaa catttacggc
     1081 aattgggtta gcaatcgtta ccattttaat gcagatcttg attcaattct ctcaggcaga
     1141 acgttcgaca cccgcaagag ttgtccccac agggccatcc aatggtgttg tacaagagaa
     1201 aaaagattga gtacaacgta ttcttgactt gtattaaaat gggttgactt ttattttaat
     1261 gtagccttta tctcttcact aatgaacaca tttgtgtagt aaaaaacagg ataccccatg
     1321 cccatggact accaatctat cttgttaatt atcagcatcc attgaattat ttaatattct
     1381 ggattggttt tctggttcag tttgatta
//
LOCUS       XM_071830508            2107 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase Nek6-like (LOC139840255), mRNA.
ACCESSION   XM_071830508
VERSION     XM_071830508.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2107
                     /gene="LOC139840255"
                     /note="serine/threonine-protein kinase Nek6-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139840255"
     CDS             196..1833
                     /gene="LOC139840255"
                     /codon_start=1
                     /product="serine/threonine-protein kinase Nek6-like"
                     /protein_id="XP_071686609.1"
                     /db_xref="GeneID:139840255"
                     /translation="MSRMEAENGEGKSKMEDYEVIEQIGRGAFGASFLVLHKIEKKKY
                     VMKKIRLNKQTEKFKKTAPQEIELISQLHHPYVVGYKDAWVDKVGICVVTAYCEGGDM
                     AELLRKARGAYFPEEKLCKWLTQLLLALDYLHTNRVLHRDLKCSKIFLTKDNNIRLGD
                     FGLAKLLSSEDVASSVVGTHNYMCPELLADIPYGYKSDIWSLGCCMFEICAHQQPFRA
                     PDMSGLINKINRCTISPLPIVYSSTLKQIIKTMLRKSPEHRPTAAELLRHPHLQPYLL
                     KCQNPSSVFLPVKPPNSPNAKTPKKESPMKLVDGERDVQVIKHNVQVTKHDENHNSGM
                     MPVRSLHDEPTFAIVEEETNLETKRVDPTSYFNDSGPENSDSLVQKDSTKSSSLDLSN
                     GEQEETSLQLFENLDEAMVGSENLLETYNENGKLVDEENISAAQMVICEVDTEKTRVV
                     ELKPVEPIDQVDQESDVKQTTKDTPINESSANPTQQRADALESLLELCARLLKQEKLE
                     ELAAVLKPFSEEKVSSRETAIWLTKSLMGEQKFAGGS"
     misc_feature    244..1008
                     /gene="LOC139840255"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase; Region:
                     STKc_Nek; cd08215"
                     /db_xref="CDD:270855"
     misc_feature    order(265..279,289..291,328..330,334..336,427..429,
                     475..486,496..498,502..504,619..621,625..627,631..636,
                     640..642,673..675,682..684,688..690,727..738)
                     /gene="LOC139840255"
                     /note="active site"
                     /db_xref="CDD:270855"
     misc_feature    order(265..270,274..279,289..291,328..330,334..336,
                     427..429,478..486,496..498,634..636,640..642,688..690)
                     /gene="LOC139840255"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270855"
     misc_feature    order(277..279,496..498,502..504,619..621,625..627,
                     631..633,682..684,727..738)
                     /gene="LOC139840255"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270855"
     misc_feature    order(670..699,715..738)
                     /gene="LOC139840255"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270855"
ORIGIN      
        1 tgtttggtga gcaactcccc tgttcttttc ttctatcctt aaaaaggaga gaagaaaaaa
       61 acacacccat tttgtttaat cggttttctt tgaagtttga gacacaccct ttaaatttct
      121 cacaaaaccc ataattttga agccataaat ttttaaactt gttgagcaca tcaggcattt
      181 gagggtttga agaatatgtc tcgaatggaa gcagaaaatg gtgagggcaa gtccaagatg
      241 gaagattatg aagttattga gcagattggt agaggagctt ttggagcttc ttttcttgtt
      301 cttcataaaa ttgaaaagaa gaagtatgtc atgaagaaaa ttcggttgaa caagcaaaca
      361 gagaagttta agaagacagc tcctcaagag attgagttga tatcccaact tcatcatcca
      421 tacgttgtgg ggtacaaaga tgcttgggtg gataaggtgg ggatatgtgt agtgacggct
      481 tattgcgaag gaggtgacat ggccgagctt ctacggaagg ctagaggagc gtatttccca
      541 gaagagaaac tctgcaaatg gctgacacaa ttattactgg cattggatta tttgcatact
      601 aatcgtgtcc ttcataggga tttaaagtgc tccaagatat ttctcactaa ggacaataac
      661 atccgtcttg gtgactttgg acttgcgaag ctcctgagct cagaagacgt tgcttcttcg
      721 gttgttggga cccacaacta tatgtgtcca gaactccttg ctgacattcc ttacggttat
      781 aaatctgata tttggtccct cggttgctgc atgttcgaga tttgtgcgca tcaacaacca
      841 tttcgagctc ctgatatgtc gggacttatc aataagataa accggtgcac catttctcct
      901 ctaccgatcg tgtactcttc aacactgaag caaattataa aaacgatgtt acggaaaagt
      961 ccagaacata gaccaactgc tgcagaactt ttacgacatc cacacttaca accgtacctc
     1021 cttaaatgtc aaaacccgtc ttccgttttt ctacccgtga aacctccaaa cagcccgaat
     1081 gctaagaccc cgaaaaaaga atcacctatg aaacttgttg atggggagag agatgtacaa
     1141 gttataaagc ataatgtaca agtaacaaaa catgacgaga atcataacag tggcatgatg
     1201 cctgtcagaa gtttacacga tgaacctact tttgctatcg tggaagaaga aacgaatcta
     1261 gagaccaaaa gggtcgaccc aacgagttat tttaatgaca gtgggccaga aaactcagat
     1321 tctttagtac aaaaagacag caccaaatcg agctcgttag atctatctaa cggtgaacaa
     1381 gaagaaacaa gtcttcaact tttcgaaaac ctagacgagg ctatggttgg aagcgagaat
     1441 cttttggaga cgtataatga aaacggtaaa ctggttgatg aagaaaacat atcagcagct
     1501 caaatggtga tttgtgaggt ggatacagag aaaactagag ttgttgaact gaagccggtt
     1561 gaacccattg accaagttga ccaagaatcg gacgttaagc aaactacgaa ggatacgccg
     1621 attaacgagt cgtcagcaaa cccgacccaa caaagagccg atgcattaga gtcgctactt
     1681 gagctgtgtg cacggttgct gaaacaagaa aaactagaag agcttgctgc tgttttgaaa
     1741 ccgtttagtg aagaaaaagt ttcgtcaaga gaaaccgcaa tttggttaac gaaaagtctc
     1801 atgggtgaac aaaaattcgc gggtggatct tgaaatcttg aatttattgt tcacctgtag
     1861 tgtatgaact tgtgattttt tcttatagtt taatagaatc tttgttgagt ataagtatgt
     1921 atgtatatct acaaatgttt tgtgttggaa acaatgggaa ctgggtgaag aaaatgtgtt
     1981 aaaagaggag gaggatatga gtaagtagtc ctttaaatgt gtattttttt tttttttttg
     2041 gtaaatattt gactgcctct acacttttag catacaaaag gcttcagttt tatccttatc
     2101 ttgtttg
//
LOCUS       XM_071830509            2438 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840256), mRNA.
ACCESSION   XM_071830509
VERSION     XM_071830509.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2438
                     /gene="LOC139840256"
                     /note="uncharacterized LOC139840256; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840256"
     CDS             255..2327
                     /gene="LOC139840256"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686610.1"
                     /db_xref="GeneID:139840256"
                     /translation="MKQTDKKKSATNVQTKRSVRPQNKDNKPPHEKPNQQQKPKNAET
                     KTTSEEASQNIKNLKLTDQETEDRKDESDTETVTDSVSSSGDSLETIPIVLKTPANKD
                     NSEKSTNISKKAIISKITTKGTNGIVKISADNNSKSVKVHPKLSSAPSSVSSEGLDHQ
                     NTEERKEADTLDDDETNKKIEEMETRIEKLEEELREVAALEISLYSVVPEHGSSAHKV
                     HTPARRLSRLYIHAAKHYSQAKRATIAKNTASGLVLIAKSCGNDVPRLTFWWSNTIVL
                     REIITQAFGSSCQSSSLTRALASNGSSSKKDSKSKPDFIEFMDDWQETRSFTSALEKV
                     ESWIFSRIVESIWWQTLTPKMQSLGDDTNSNKGIGKLVGPTSGNQQQVNFSINQWKIA
                     FHDAFKRLCPVRASGHECGCLPVLARMVMEQCVARLDVAMFNAILRESAHEMPTDPVS
                     DPIVESRVLPIPAGDLSFGSGAQLKNAVGNWSRWLSDWFGMDTEDEHTKDEDEDIQKE
                     KSDKCFHLLNALSDLLMLPKDMLMDRSVRTEVCPSISLSLLKRILCNFTPDEFCPDSV
                     PGAVLEVVNAESIIERRLSGDDSSSFPYAAAPVIYKPPSSTDVSQKVSEAGRKSLLNR
                     NASVVQRKGYTSDEELEELDSPLSSIIDKLPSSPTVARNESGQNSDQTPRVAVNARYE
                     LLREVWLS"
     misc_feature    273..>671
                     /gene="LOC139840256"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     Region: MSCRAMM_ClfA; NF033609"
                     /db_xref="CDD:468110"
     misc_feature    <723..>851
                     /gene="LOC139840256"
                     /note="DNA double-strand break repair Rad50 ATPase;
                     Region: PRK02224"
                     /db_xref="CDD:179385"
     misc_feature    <1782..1934
                     /gene="LOC139840256"
                     /note="DIL domain; Region: DIL; pfam01843"
                     /db_xref="CDD:460359"
ORIGIN      
        1 ttccatagtc agaaaaaaac agaacattat aactatacat acacacttcc tgtatctata
       61 gtctacagat atactccgta tatatcatca agtatttata tgtaacatta aatagtaaag
      121 agtttggaat ataataaaaa gtgttcttca agttcaagaa gctgctgcta ctgctaatcc
      181 caaatattct tttagattat catcaaaagt ttaaagcaaa aaaaactgaa gattgaataa
      241 aggatagagc aaatatgaag caaacagaca aaaagaagtc tgcaacaaat gttcaaacca
      301 aacgttcggt aaggcctcaa aacaaagata acaagccacc acatgaaaaa ccgaaccaac
      361 aacagaaacc taaaaacgca gagacaaaaa ctacgtctga agaagcatct caaaacatta
      421 aaaatcttaa actcactgat caagaaaccg aggatcgaaa ggatgaatca gatactgaaa
      481 ccgtcactga ttctgtatcc tcgagtggtg attcactaga aaccattcca atagtcctga
      541 aaacgcctgc aaataaagat aattctgaaa aatcaacaaa tatttcgaag aaagctatta
      601 tttcaaaaat aacgacgaaa ggtactaatg ggatagtgaa aatttcggct gataataact
      661 cgaagagtgt gaaagttcat ccaaaattgt cgtcagcacc ttcatcagta tcatctgaag
      721 gattagatca ccaaaatacc gaagaacgta aggaagcgga tacattggat gatgatgaaa
      781 caaataaaaa aatcgaagaa atggaaacga gaatcgagaa acttgaagag gagttgagag
      841 aagttgcagc tctcgaaatt tctctttatt cggtagtacc ggagcatggt agttcggccc
      901 ataaggtgca tacaccggct cgacgtcttt ctagacttta tatccatgca gccaaacact
      961 actctcaagc gaaacgggct accatcgcta aaaacactgc ttccgggctt gttttaattg
     1021 ccaaatcttg tggtaatgat gtcccaaggt tgactttttg gtggtcgaac acgattgttt
     1081 tgagggagat aataacccaa gcatttggga gttcatgcca atcaagttca ttaacaagag
     1141 cactcgcttc aaacgggtca agtagtaaaa aggatagtaa aagtaaacct gattttatcg
     1201 agttcatgga tgattggcaa gaaacacgaa gtttcacgtc cgcacttgaa aaggttgagt
     1261 cgtggatctt ttcacgaatc gtggagtcta tatggtggca gacattgact cctaaaatgc
     1321 aatctttagg ggatgataca aatagtaata aaggtatcgg taagttagta ggacccactt
     1381 caggtaacca gcaacaggtt aacttttcga taaatcaatg gaaaattgct tttcacgacg
     1441 ctttcaagag actttgtcct gttcgtgcga gtggtcatga atgtggttgc cttcccgttt
     1501 tggcaaggat ggtaatggaa caatgtgttg cgagactaga tgtagccatg tttaatgcga
     1561 ttcttcgtga atcggcccat gaaatgccta cggatcctgt atcggatccg attgtcgaat
     1621 ccagagtttt gcctatacca gctggggatc taagttttgg gtctggtgcc cagctcaaaa
     1681 acgcggttgg caattggtct agatggctat ctgattggtt tgggatggac accgaggatg
     1741 agcataccaa agatgaagac gaagatatac aaaaagaaaa aagtgataaa tgttttcatc
     1801 ttttaaatgc attaagtgat cttcttatgt tgccgaaaga catgcttatg gacagatcag
     1861 ttagaacaga ggtatgcccg tcgatcagtc tttcattgct taaacgaatt ctctgcaatt
     1921 tcactccaga tgaattctgt cctgattcgg ttcctggtgc agtactggaa gtagtaaacg
     1981 ccgagtccat cattgagcgt agattatccg gagacgattc aagcagtttc ccatacgcag
     2041 ctgcaccagt catatacaaa ccaccttcat ccaccgatgt ttctcaaaag gtctcagagg
     2101 caggtcgaaa atcgctactg aacagaaacg cgtcagttgt tcagagaaaa ggttatacaa
     2161 gtgatgaaga actagaagaa ctcgattcac cactaagttc tattatcgat aaactacctt
     2221 cgtctccaac tgttgcaaga aacgaaagcg gtcaaaattc agaccaaaca cctcgtgttg
     2281 cagttaatgc aagatatgaa cttcttcgcg aggtctggtt atcatgagtt gtagctcgcg
     2341 tactataaaa ataaaaataa aaaacagaaa aaaaataggg gggagtcata ccgtgtgtta
     2401 taaatcttgt gaatttacag tgctaagttg tactatat
//
LOCUS       XR_011757286             349 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840257), ncRNA.
ACCESSION   XR_011757286
VERSION     XR_011757286.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..349
                     /gene="LOC139840257"
                     /note="uncharacterized LOC139840257; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840257"
     ncRNA           1..349
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840257"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840257"
ORIGIN      
        1 ggatttgatg atttcgtgag acgagcaaaa gaacggccag aataggagct tgattccttt
       61 atttggattg ttgagatgtg gttagtcaaa aatggattga ggtgtttcta gatatgtttc
      121 tgtatatttc aaggtttgat cattgtcttc ataaattaga catgatggtt tgttaaagaa
      181 tgcaaattgg gagatgatta ctttctattc taggtgagat gacattaacc cttcagtttt
      241 attgaataag gtgtaaattt agccgaggtt tcaattgttt acaaccaggt ttgagatttt
      301 gagcttagtt ttgtaatgct atatggttca caaagttgtt tgatttaga
//
LOCUS       XM_071830511            1814 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides hexosyltransferase
            GAUT11-like (LOC139840258), mRNA.
ACCESSION   XM_071830511
VERSION     XM_071830511.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1814
                     /gene="LOC139840258"
                     /note="hexosyltransferase GAUT11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840258"
     CDS             112..1680
                     /gene="LOC139840258"
                     /codon_start=1
                     /product="hexosyltransferase GAUT11-like"
                     /protein_id="XP_071686612.1"
                     /db_xref="GeneID:139840258"
                     /translation="MRRRAADYRRRVRRRLSIWIWVFLGLFSVAGFIFIFLQHNYQDQ
                     DPNQRHHHQPVLEQNPGNIRVTHNKLNLTKEIASANSYTRQLLEQMTLAKAYVVIAKE
                     HNNLHLAWQLSSNIRNCQSLLSKAAMRADPITQDEAEPLISSLSSLILKSQHAHYDIA
                     TTMMTMKSHIQALEERANAATVQSAFFGQLAAESLPKNLHCLNVKLVSAWLTKKWIRD
                     FADENKISPRLLDNNLYHFCLFSDNVLAVSAVVNSTVSNADHPTQLVFHVVTNEANYA
                     AMQAWFLTNDFKGSMIEVQKVEDLTWLNGTYSPVIKRLKEFDANTKFVSLLNYLRFYI
                     PEIYPHLEKVVFLDDDVIVQKDLTPLFSLDLHGNVNGAVETCLEAYHRLYKYLNFSNP
                     VLSSKIDPQGCGWAFGLNVFDLVAWRNANVTGVYHYWEEQNADGNLWKLGTLPAGLLA
                     FYGQTEPLDRRWHVSGLGFDVNIDTRLIESAAVVHFNGNMKPWLKFGIGRYKPLWQRY
                     VNTTHPYLVNCVTS"
     misc_feature    157..1677
                     /gene="LOC139840258"
                     /note="Probable galacturonosyltransferase; Region:
                     PLN02742"
                     /db_xref="CDD:215395"
ORIGIN      
        1 cttctaatac gcgatttatt gatgggtttt caataaagta tgaaactttt ttatgctcat
       61 tatcaaattt gatggattct tgattgggtg attgtgaatt ttattaaaaa gatgcgccgg
      121 cgagctgctg attaccggcg ccgggttcga cggcggcttt caatttggat ctgggtgttt
      181 cttggattgt tctctgttgc tggatttata tttatttttc ttcaacataa ttatcaggat
      241 caagatccca atcaacgcca ccaccatcaa cctgttttgg aacaaaatcc aggaaatatt
      301 cgagttactc acaacaagct gaatctaacg aaagagatag ctagtgccaa ttcgtacacc
      361 agacaactat tagagcaaat gacacttgcg aaagcgtacg tagtcattgc aaaagaacac
      421 aataaccttc atcttgcttg gcaactaagt tcaaatataa gaaattgtca atctttgctt
      481 tcaaaagccg ccatgagagc ggaccccatc acacaagatg aagcggaacc gcttattagc
      541 agtctatcgt ctctaattct caaatctcag catgctcatt atgatattgc aacaacaatg
      601 atgactatga aatctcacat tcaagccctt gaagaacgcg caaacgcagc cacggttcaa
      661 agtgcgtttt ttggacagtt agcagccgaa tcactaccca agaatcttca ttgtttaaac
      721 gttaaacttg tgtctgcttg gctaacgaaa aaatggatac gagattttgc agacgagaac
      781 aaaatctctc caaggttatt agacaacaat ctttaccatt tctgcttgtt ttccgataat
      841 gtgctggcgg tttcagctgt ggtcaactct acagtctcga atgctgacca tccaacgcaa
      901 ctcgtgtttc atgtagtcac gaacgaagcc aattatgcag caatgcaagc atggtttctt
      961 acaaatgact ttaaagggtc catgattgaa gttcaaaaag tcgaagattt aacttggttg
     1021 aacggtactt actctcctgt catcaaacga ttaaaagaat tcgatgccaa cacaaagttt
     1081 gtatctttgt taaactatct tcgattttac atacctgaga tctatcctca ccttgaaaaa
     1141 gttgtctttc ttgatgatga tgtcatcgtc caaaaagatt taaccccact tttttctttg
     1201 gatcttcatg gtaatgtaaa tggagcggtt gaaacgtgcc ttgaagctta tcaccgactg
     1261 tataaatatc ttaacttctc aaacccagtt ttgagttcca agattgaccc acagggttgt
     1321 gggtgggctt ttgggttaaa cgtctttgat ttagtggctt ggaggaatgc taatgtgaca
     1381 ggcgtgtacc attactggga agaacagaat gcagatggga atttatggaa gttagggact
     1441 ttgccagctg gacttttagc cttttacgga cagactgagc cattggaccg aagatggcac
     1501 gtgtcgggac tagggtttga tgtgaatatc gataccaggc tcatagagag tgcagctgtg
     1561 gttcatttta atgggaacat gaaaccatgg ctaaagtttg ggattgggag gtataagcct
     1621 ttatggcaaa ggtatgttaa cacaacacat ccttatcttg ttaattgtgt tacaagctga
     1681 ggttactgct agtgtagagt cagaaataga aaattttgct tttgtattga tgttttagtt
     1741 gcaacattta taaattatat tcttttgtta gattattgtc atcacattga aaggaagaat
     1801 ccagttttgt gaca
//
LOCUS       XM_071830512            2570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides FT-interacting protein
            3-like (LOC139840259), mRNA.
ACCESSION   XM_071830512
VERSION     XM_071830512.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2570
                     /gene="LOC139840259"
                     /note="FT-interacting protein 3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 77
                     Proteins"
                     /db_xref="GeneID:139840259"
     CDS             105..2453
                     /gene="LOC139840259"
                     /codon_start=1
                     /product="FT-interacting protein 3-like"
                     /protein_id="XP_071686613.1"
                     /db_xref="GeneID:139840259"
                     /translation="MMNKPPQMMTRPPQEDFSLKETKPHLGGSKVTGDKLTSTYDLVE
                     QMQYLYVRVVKAKDLPAKDLTGSCDPYVEVRMGNYKGTTRHFEKNTHPEWNQVFSFSK
                     DRIQSTMLEVTVKDKDVLKDDFIGGVLFDLNEVPKRVPPDSPLAPQWYKLIDRKGDKL
                     KGELMLAVWWGTQADEAFPEAWHSDAAAISADGLASIRSKVYLSPKLWYLRVNVIEAQ
                     DLIPNDKTRFPEVYVKAILGNQVLRTRVSVSKTINPLWNEDLMFVVSEPFEEPLILSV
                     EDRVGPNKDEVLGRCAIPLQYVDRRLDHKAINTRWFNLEKHIMIEGEKKKEVKFASRI
                     HMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLEVGILSANGLSPMKTKDGRA
                     TTDAYCVAKYGTKWVRTRTIIDSFTPKWNEQYTWEVFDPCTVITIGVFDNCHLQGGGD
                     KPGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVKKMGEIHLAVRFTCSSLM
                     NMMHMYSQPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLGRAEPPLRKEIVEYMLDV
                     GSHMWSMRRSKANFLRIMSVLGGLISIGKWFDQICNWKNPITTVLIHVLFVILVLYPE
                     LILPTIFLYLFLIGIWYYRWKPRNPPHMDTRLSCADNAHPDELDEEFDTFPTSRQPDI
                     VRMRYDRIRSIAGRMQTVIGDLATQGERFQSLISWRDPRATALFVIFCLLAAILLYVT
                     PFQVLALFIGFYILRHPRFRRKLPSVPLSFFRRLPARTDCML"
     misc_feature    246..620
                     /gene="LOC139840259"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     Region: C2B_MCTP_PRT_plant; cd08378"
                     /db_xref="CDD:176024"
     misc_feature    order(309..311,450..452,456..458,471..473)
                     /gene="LOC139840259"
                     /note="putative Ca2+ binding site [ion binding]; other
                     site"
                     /db_xref="CDD:176024"
     misc_feature    729..1181
                     /gene="LOC139840259"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     Region: C2C_MCTP_PRT_plant; cd04019"
                     /db_xref="CDD:175986"
     misc_feature    order(774..776,792..794,936..938,942..944,960..962)
                     /gene="LOC139840259"
                     /note="putative Ca2+ binding site [ion binding]; other
                     site"
                     /db_xref="CDD:175986"
     misc_feature    1215..1601
                     /gene="LOC139840259"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     Region: C2D_MCTP_PRT_plant; cd08379"
                     /db_xref="CDD:176025"
     misc_feature    order(1269..1271,1287..1289,1425..1427,1431..1433,
                     1473..1475)
                     /gene="LOC139840259"
                     /note="putative Ca2+ binding site [ion binding]; other
                     site"
                     /db_xref="CDD:176025"
     misc_feature    1983..2450
                     /gene="LOC139840259"
                     /note="Plant phosphoribosyltransferase C-terminal; Region:
                     PRT_C; pfam08372"
                     /db_xref="CDD:337028"
ORIGIN      
        1 ccccacatta atttcaattc tctcaacatt tcaaccaaat ctgaccaaga atcttcacac
       61 aacatttcac tgaaatctca ctttcatttc cactctttat caagatgatg aataaacctc
      121 cgcagatgat gactagacct ccacaagagg atttttctct caaagaaaca aaaccgcatt
      181 taggcggtag taaagtcact ggcgataagc tcacgagcac ctatgatctt gtcgaacaaa
      241 tgcaatactt atatgttcgg gttgttaaag ccaaagattt acccgcaaaa gatctaaccg
      301 gaagttgtga cccgtatgtt gaggttcgaa tgggaaacta caagggtaca acgcgtcatt
      361 tcgaaaaaaa cacacacccc gagtggaacc aagtgttttc tttctctaaa gaccgaattc
      421 agtcaacaat gctcgaggtt acggtcaaag ataaagatgt tctaaaagac gatttcatag
      481 gtggtgtttt gttcgatctt aatgaagtcc cgaaacgggt cccacccgat agcccgttag
      541 ctccacaatg gtataagtta atagaccgaa aaggggacaa gcttaaaggt gaacttatgt
      601 tagccgtttg gtggggtaca caagcggatg aagcttttcc cgaagcatgg cattcggatg
      661 ctgcagccat tagtgcagat gggctcgcta gtattcgatc aaaagtttat ttatcaccta
      721 aactttggta tcttagagtt aatgtaattg aagcccaaga tttgataccg aatgataaaa
      781 ctcggtttcc cgaagtttat gtaaaagcca ttctcgggaa tcaagtttta aggactcgtg
      841 tttccgttag caagactata aacccgttat ggaacgagga tttgatgttt gtagtttcgg
      901 aaccttttga agaacctttg atattgagcg tagaggatcg ggtgggcccg aataaagacg
      961 aagttctagg aaggtgtgcg atcccgttac aatatgtaga ccgtaggttg gatcacaaag
     1021 cgattaacac tcgttggttt aatcttgaaa agcatattat gattgaaggt gaaaagaaga
     1081 aagaagttaa gtttgctagt cgaattcaca tgcggatttg tttagaaggt ggttatcatg
     1141 ttcttgatga atcgacccat tatagtagcg atttacgccc aaccgctaaa cagttatgga
     1201 aaagtagtat cggggtgctt gaggttggaa tcttgagtgc taacgggctg tcaccgatga
     1261 aaacgaaaga tggaagggca acaactgatg cttactgtgt cgcgaaatat gggacgaaat
     1321 gggtcagaac ccgaaccata attgatagct ttacgcccaa atggaacgag cagtacactt
     1381 gggaagtttt cgacccatgt actgtcataa caattggagt tttcgataat tgtcatttac
     1441 aaggtggagg agataaacct ggtggggcca gagattctcg tatcggaaag gttcgtattc
     1501 gcctctcaac cctcgaaact gatcgggttt acacccactc gtacccgctt ctcgttttgc
     1561 acccgtctgg tgtcaaaaaa atgggtgaga tccatttagc tgttcggttt acttgctcgt
     1621 ctttaatgaa catgatgcat atgtactcgc aaccattact acccaaaatg cattacatac
     1681 acccgttaac cgtgagccaa ctcgatagtt tgcggcacca agcgacccaa attgtgtcga
     1741 tgagattggg tcgggctgaa cccccgttac gaaaagagat tgttgagtat atgctcgatg
     1801 tcggttcgca tatgtggagt atgagacgaa gtaaagcgaa ttttttaaga atcatgtcag
     1861 ttttgggcgg attaatctcg atcggaaaat ggtttgatca gatttgtaac tggaaaaacc
     1921 cgatcacgac ggttttgatc cacgtactct tcgtgatact cgttttatac cccgaactta
     1981 tactccctac gattttcctt taccttttct taatcgggat ttggtactac cgatggaaac
     2041 cacgaaaccc tccccatatg gacacccgtt tatcgtgtgc tgacaacgct cacccagatg
     2101 aactcgacga agaattcgac acgttcccaa catcacgtca gcctgacatc gttcgtatgc
     2161 ggtatgatcg gatcagaagc attgcaggtc gtatgcaaac ggtgattggt gatttggcaa
     2221 ctcaaggaga acgttttcag tcgttaatca gctggaggga cccaagagct actgcacttt
     2281 ttgtgatatt ttgtttactt gctgcaattt tactgtacgt gacgcctttt caagttcttg
     2341 cgcttttcat agggttttac attttacgac acccgaggtt ccgtcgtaag ttgccttccg
     2401 tgccgctcag tttctttaga agattacctg ctcgcaccga ctgcatgctg tgagataaag
     2461 gtgctaactt tttatcgttt tcaagattta gcttttcggt gaaaaaggtt gctttctcct
     2521 ggtaagatgt ttttaacttt atgttcgagg ttgtgttttg ttgatgttgt
//
LOCUS       XM_071830513            1336 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides FKBP12-interacting protein
            of 37 kDa-like (LOC139840260), mRNA.
ACCESSION   XM_071830513
VERSION     XM_071830513.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1336
                     /gene="LOC139840260"
                     /note="FKBP12-interacting protein of 37 kDa-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840260"
     CDS             120..1169
                     /gene="LOC139840260"
                     /codon_start=1
                     /product="FKBP12-interacting protein of 37 kDa-like"
                     /protein_id="XP_071686614.1"
                     /db_xref="GeneID:139840260"
                     /translation="MASHPNIDDDDDFGGDFAGTNPTRVSGTKRGFGDIDDDEDDIFG
                     SKKANIKVEETAPGVATGMILSLRESLQSCKDTLATCQSELEAAKAENQKWHCAFQKE
                     SFIPQGSSVEPSVVIHYLQNLKSSEESVREQLEKSRKKEAAFIVTIAKREQEIADLKS
                     AVRDLRSQLKPLSMQARRLLLDPAIHEEFMRLKNLVEEKDKKVKELQDNVAAVNFTPQ
                     SKMGKSLMAKCRTLQEENEEIGNQAKEGKIHELSMKLASQKAQNVELRNHYEGLFKHM
                     EGLTNDVEKSNEMVLILEEKLEDKEAEIRRLRYQLNQTSEVEEITRIVAGDKKDTDED
                     VIVDDDVGVSMEAEN"
     misc_feature    525..989
                     /gene="LOC139840260"
                     /note="WTAP/Mum2p family; Region: Wtap; pfam17098"
                     /db_xref="CDD:465345"
ORIGIN      
        1 cccctttttt gtattttcca ttactcttac cctcctccgt cttactacca tcagccaaat
       61 ttcaaatcca aacaaaggtt agggttttac aatcctacat aattagatag attacaccaa
      121 tggcatcaca tcctaacatc gacgacgatg atgattttgg cggtgatttc gctggcacta
      181 accctacgag agtatcaggc actaagagag ggtttggaga tattgatgat gatgaagacg
      241 atatatttgg atccaaaaag gctaacataa aagtagaaga aaccgcacca ggtgtggcaa
      301 ccgggatgat tttatctctt cgcgaaagtc tccagagctg taaggatact cttgctacat
      361 gccaatcaga gcttgaagct gcgaaggcag aaaatcaaaa atggcattgt gcctttcaga
      421 aggaatcgtt tattcctcag ggctcatcag ttgagcctag cgtagtgatc cattatcttc
      481 aaaacctaaa atcgtctgag gagtctgtta gagagcagct agaaaaatca aggaaaaagg
      541 aagctgcatt tatagtaacc attgcaaagc gagagcagga aatagcagat ttgaagtctg
      601 cagttcggga tctaagatcg caactcaagc ctctttcaat gcaggcaaga agattattgc
      661 ttgatcctgc aatccatgag gaatttatgc gtttgaagaa tttggtagag gagaaggata
      721 aaaaagtaaa ggagctgcag gataatgttg ctgcagttaa cttcacccca caaagcaaaa
      781 tgggaaagag tctaatggca aaatgcagga ccctacaaga agaaaatgag gagataggga
      841 atcaagctaa ggaaggaaag atacatgagt tgtcaatgaa acttgcttcg cagaaagctc
      901 agaatgtaga actcagaaac cattatgaag gattattcaa gcacatggaa ggactgacaa
      961 atgatgttga aaaatcaaat gaaatggttc ttatattgga agagaagctt gaagacaaag
     1021 aggctgagat ccgaagatta aggtatcagc tgaatcaaac gagtgaagta gaggaaataa
     1081 cgaggatagt tgctggtgat aaaaaagaca cagatgagga tgttatagta gatgacgacg
     1141 ttggagtatc aatggaagcc gagaattaga attcatacga ggtctagact gtgtttcctc
     1201 taagcccttt ggctttgtag tgtgtacatt aatgtgttgt ggcacatcaa atgtgaacac
     1261 ttttgtgatt ttgacaactt agctaaaact agtttgtgct taaattactt ctcttgaaaa
     1321 acctgtttat atggta
//
LOCUS       XR_011757287             714 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840261), ncRNA.
ACCESSION   XR_011757287
VERSION     XR_011757287.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139840261"
                     /note="uncharacterized LOC139840261; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840261"
     ncRNA           1..714
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840261"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840261"
ORIGIN      
        1 agaagggtag aagggtaatt ttacctattg taagtcttta gaggagtcta aacacccctc
       61 attttctcat atgtgcagaa aatttcaagt gtgtgagtgt gtgtgaggtg ggtggcgatt
      121 ttggggatgt aagcacaaat ccttgaagtt tttcacatgc aattaagtct ttgggttgaa
      181 tcaagcttgt tgatacttgc tagcatagtt ggagctctta tttccttctt cttagtgaaa
      241 tttgaggttt ttaactctag cttgaggtga aattgtgctt gatgatggat acgttgactt
      301 cttgactgga agtgtttgat aaatggttgt tgaatagttg cttgaaagtt gttgttgcgt
      361 aaattgctcg gattcgaggt cccggtttgg ataaaggtaa gaacactata gagcattgat
      421 ttgtagatga ctacttatat tttggaagct atacttttgc tagaagtact tgcttatgct
      481 tttgggatgt tagatttctt ttgaaggatt tgattgttaa tgggtagtca tcccggagac
      541 tcacgctcga acacttgtat tggcttttgt ccatttgggt ctagataatc aattttgttg
      601 ttatgggtcg ttgttaacac ttgtagtgca taatgggtca aatttgccac ttgtcttatt
      661 tttgggtcgt aaacctagca ctcgtacttt ggttgatgca atggctacat tatg
//
LOCUS       XR_011757288            2993 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X1, ncRNA.
ACCESSION   XR_011757288
VERSION     XR_011757288.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2993
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2993
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2993
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtggtataa cccgactgtg atacaacaat atttggttgt
     1801 ggcaattttc atcgacataa agattctaat tgaaggtggc aattattgcc catttacttg
     1861 cagtcgggtc gttgaggtac ttccagaagg ctttagctac ttatgagtta taaggcgctt
     1921 tcatgcagtt gaaatacaac tgcatcagcc ttttgtgcaa aaaaagtgtg cggagtggat
     1981 gtctttttct tttttcgttt tttgacgtgt tgcgactcct cttttttgtc aactggctca
     2041 tcatcaatta tttcgtatgt tggaggcaaa tgtgccatgg aacctgcaac tttcaagtat
     2101 attaaactat tagtgttcaa aatccaaggc taaaaggatg ataaagtata agggtggata
     2161 tagttgatag ttgttagggt tgaagaaaaa atgcaaacat ataagttcgt catccgtcgc
     2221 tatcaatata gttggcgaaa ctgatctttg tcaacagatt tggttcaaat cgtttttgtg
     2281 tattgctcgg aatctgagac cagatgcacc tattagttgt tgcctactgc tagaccctta
     2341 tctcagcttg tggtcgcaat tatggacggg tcaagtgaca tcttgaaact actctttcgg
     2401 aacaggcact ttatagtaat acttgctaga tggtttggtc tattgctaat ggatcttcaa
     2461 gatctttaaa gacgtacaag aaatttgtca cttttgtaga atttcttaat atcatgggat
     2521 cacaaggtca caagtaatac gaatgaaatt taaaaaaatg ttaacttgct gattgattaa
     2581 tcggtattta tttaagctta atgtaatgag catcttatgc tatccaagag gataccggtc
     2641 atgtaaatta tggtatgtgg ttattataaa aaacaaggtt ggtttgactt atgctggtca
     2701 aactaatgtt ggttatggga tgtgtttgta cattttgctt cttatcttta ggggcctgaa
     2761 aataattccc cctttttttt gcattttatt tttccgaaaa tggtactttc tcgcattaga
     2821 aaacggctta tcttactaca caattatgtc actgtctttg ttatttacat gagcaaacaa
     2881 attatatgta gctaacccga atgtctgatt gttacttcaa atagaaaaat caaatcacaa
     2941 aatagtacca cattagctaa tatgtctttc tagtggcttt actgactgca att
//
LOCUS       XR_011757289            2794 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X2, ncRNA.
ACCESSION   XR_011757289
VERSION     XR_011757289.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2794
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2794
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaaaggtta aatggtattt caaacctttt catttcatgg
      601 aggtgatgac acgagcaaat gtatattttc tttttaccct gacatcgaaa gctttccaac
      661 attatgtgta ttttgcgtac taagtgaagc ttccattaaa atcacgacat gatgaggagt
      721 ggaggcatct agaagaggag ctgaatttac ataaggatgt gttctttcag tacatctatc
      781 taatcaagtg tagtactttt acagctatct tatattgtga aaatgtgatt atattgtgat
      841 gattttgtta tgttcaaaca ggctttttat tttttggaat gatgcagatt agtattaatt
      901 tgatgagtta ctgtaatttt ttaaatccta ttttgtattt gtatgtttga tttgcagttc
      961 ctctgtttcg gttacccatt gtgattttgt gtgttttgga tgcacactag gtgttcgatt
     1021 aaatgtcaga taggcttcaa catcaagatt tagtggtgaa tatgagaaga caatctgacg
     1081 gctttacatc tttattagaa ttggaacaag taaattcttc gattatacaa aactatggta
     1141 tccatttctg gttgttgaaa aagggcgttg gtggttattc attgtattgc cgacacttgc
     1201 accatctccg ccgttgaata tgagtgaatt ttactgacat tgattgagta taaaatttgc
     1261 aatttgattg agtgaatgtg ttataccgac atttaatttt ttcaatttct tttgggcagg
     1321 ttgtagcatg tgcctttgtt tgtaattctg tttgccttta gatggtacta attgacgctt
     1381 tttgagatct gcctctcttc acgacataca aacactgcac ttgtgatgtt taagatcgac
     1441 ttttgtggga tcttgcaatt gattgattga ttgtggtaca acaatatttg gttgtggcaa
     1501 ttttcatcga ctgtgataca acaatatttg attgattgat tgtggtacaa caatatttga
     1561 ttgtggtata acccgactgt gatacaacaa tatttggttg tggcaatttt catcgacata
     1621 aagattctaa ttgaaggtgg caattattgc ccatttactt gcagtcgggt cgttgaggta
     1681 cttccagaag gctttagcta cttatgagtt ataaggcgct ttcatgcagt tgaaatacaa
     1741 ctgcatcagc cttttgtgca aaaaaagtgt gcggagtgga tgtctttttc ttttttcgtt
     1801 ttttgacgtg ttgcgactcc tcttttttgt caactggctc atcatcaatt atttcgtatg
     1861 ttggaggcaa atgtgccatg gaacctgcaa ctttcaagta tattaaacta ttagtgttca
     1921 aaatccaagg ctaaaaggat gataaagtat aagggtggat atagttgata gttgttaggg
     1981 ttgaagaaaa aatgcaaaca tataagttcg tcatccgtcg ctatcaatat agttggcgaa
     2041 actgatcttt gtcaacagat ttggttcaaa tcgtttttgt gtattgctcg gaatctgaga
     2101 ccagatgcac ctattagttg ttgcctactg ctagaccctt atctcagctt gtggtcgcaa
     2161 ttatggacgg gtcaagtgac atcttgaaac tactctttcg gaacaggcac tttatagtaa
     2221 tacttgctag atggtttggt ctattgctaa tggatcttca agatctttaa agacgtacaa
     2281 gaaatttgtc acttttgtag aatttcttaa tatcatggga tcacaaggtc acaagtaata
     2341 cgaatgaaat ttaaaaaaat gttaacttgc tgattgatta atcggtattt atttaagctt
     2401 aatgtaatga gcatcttatg ctatccaaga ggataccggt catgtaaatt atggtatgtg
     2461 gttattataa aaaacaaggt tggtttgact tatgctggtc aaactaatgt tggttatggg
     2521 atgtgtttgt acattttgct tcttatcttt aggggcctga aaataattcc cccttttttt
     2581 tgcattttat ttttccgaaa atggtacttt ctcgcattag aaaacggctt atcttactac
     2641 acaattatgt cactgtcttt gttatttaca tgagcaaaca aattatatgt agctaacccg
     2701 aatgtctgat tgttacttca aatagaaaaa tcaaatcaca aaatagtacc acattagcta
     2761 atatgtcttt ctagtggctt tactgactgc aatt
//
LOCUS       XR_011757290            2964 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X3, ncRNA.
ACCESSION   XR_011757290
VERSION     XR_011757290.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2964
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2964
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2964
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtggtataa cccgactgtg atacaacaat atttggttgt
     1801 ggcaattttc atcgacataa agattctaat tgaaggtggc aattattgcc catttacttg
     1861 cagtcgggtc gttgaggtac ttccagaagg ctttagctac ttatgagaga gagacacttc
     1921 ctcatctccg tctacagtgt gcggagtgga tgtctttttc ttttttcgtt ttttgacgtg
     1981 ttgcgactcc tcttttttgt caactggctc atcatcaatt atttcgtatg ttggaggcaa
     2041 atgtgccatg gaacctgcaa ctttcaagta tattaaacta ttagtgttca aaatccaagg
     2101 ctaaaaggat gataaagtat aagggtggat atagttgata gttgttaggg ttgaagaaaa
     2161 aatgcaaaca tataagttcg tcatccgtcg ctatcaatat agttggcgaa actgatcttt
     2221 gtcaacagat ttggttcaaa tcgtttttgt gtattgctcg gaatctgaga ccagatgcac
     2281 ctattagttg ttgcctactg ctagaccctt atctcagctt gtggtcgcaa ttatggacgg
     2341 gtcaagtgac atcttgaaac tactctttcg gaacaggcac tttatagtaa tacttgctag
     2401 atggtttggt ctattgctaa tggatcttca agatctttaa agacgtacaa gaaatttgtc
     2461 acttttgtag aatttcttaa tatcatggga tcacaaggtc acaagtaata cgaatgaaat
     2521 ttaaaaaaat gttaacttgc tgattgatta atcggtattt atttaagctt aatgtaatga
     2581 gcatcttatg ctatccaaga ggataccggt catgtaaatt atggtatgtg gttattataa
     2641 aaaacaaggt tggtttgact tatgctggtc aaactaatgt tggttatggg atgtgtttgt
     2701 acattttgct tcttatcttt aggggcctga aaataattcc cccttttttt tgcattttat
     2761 ttttccgaaa atggtacttt ctcgcattag aaaacggctt atcttactac acaattatgt
     2821 cactgtcttt gttatttaca tgagcaaaca aattatatgt agctaacccg aatgtctgat
     2881 tgttacttca aatagaaaaa tcaaatcaca aaatagtacc acattagcta atatgtcttt
     2941 ctagtggctt tactgactgc aatt
//
LOCUS       XR_011757291            2732 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X4, ncRNA.
ACCESSION   XR_011757291
VERSION     XR_011757291.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2732
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2732
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtggtataa cccgactgtg atacaacaat atttggttgt
     1801 ggcaattttc atcgacataa agattctaat tgaaggtggc aattattgcc catttacttg
     1861 cagtcgggtc gttgaggtac ttccagaagg ctttagctac ttatgagagt tgttagggtt
     1921 gaagaaaaaa tgcaaacata taagttcgtc atccgtcgct atcaatatag ttggcgaaac
     1981 tgatctttgt caacagattt ggttcaaatc gtttttgtgt attgctcgga atctgagacc
     2041 agatgcacct attagttgtt gcctactgct agacccttat ctcagcttgt ggtcgcaatt
     2101 atggacgggt caagtgacat cttgaaacta ctctttcgga acaggcactt tatagtaata
     2161 cttgctagat ggtttggtct attgctaatg gatcttcaag atctttaaag acgtacaaga
     2221 aatttgtcac ttttgtagaa tttcttaata tcatgggatc acaaggtcac aagtaatacg
     2281 aatgaaattt aaaaaaatgt taacttgctg attgattaat cggtatttat ttaagcttaa
     2341 tgtaatgagc atcttatgct atccaagagg ataccggtca tgtaaattat ggtatgtggt
     2401 tattataaaa aacaaggttg gtttgactta tgctggtcaa actaatgttg gttatgggat
     2461 gtgtttgtac attttgcttc ttatctttag gggcctgaaa ataattcccc cttttttttg
     2521 cattttattt ttccgaaaat ggtactttct cgcattagaa aacggcttat cttactacac
     2581 aattatgtca ctgtctttgt tatttacatg agcaaacaaa ttatatgtag ctaacccgaa
     2641 tgtctgattg ttacttcaaa tagaaaaatc aaatcacaaa atagtaccac attagctaat
     2701 atgtctttct agtggcttta ctgactgcaa tt
//
LOCUS       XR_011757292            2825 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X5, ncRNA.
ACCESSION   XR_011757292
VERSION     XR_011757292.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2825
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2825
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagttt cctctgtttc ggttacccat tgtgattttg
     1021 tgtgttttgg atgcacacta ggtgttcgat taaatgtcag ataggcttca acatcaagat
     1081 ttagtggtga atatgagaag acaatctgac ggctttacat ctttattaga attggaacaa
     1141 gtaaattctt cgattataca aaactatggt atccatttct ggttgttgaa aaagggcgtt
     1201 ggtggttatt cattgtattg ccgacacttg caccatctcc gccgttgaat atgagtgaat
     1261 tttactgaca ttgattgagt ataaaatttg caatttgatt gagtgaatgt gttataccga
     1321 catttaattt tttcaatttc ttttgggcag gttgtagcat gtgcctttgt ttgtaattct
     1381 gtttgccttt agatggtact aattgacgct ttttgagatc tgcctctctt cacgacatac
     1441 aaacactgca cttgtgatgt ttaagatcga cttttgtggg atcttgcaat tgattgattg
     1501 attgtggtac aacaatattt ggttgtggca attttcatcg actgtgatac aacaatattt
     1561 gattgattga ttgtggtaca acaatatttg attgtggtat aacccgactg tgatacaaca
     1621 atatttggtt gtggcaattt tcatcgacat aaagattcta attgaaggtg gcaattattg
     1681 cccatttact tgcagtcggg tcgttgaggt acttccagaa ggctttagct acttatgagt
     1741 tataaggcgc tttcatgcag ttgaaataca actgcatcag ccttttgtgc aaaaaaagtg
     1801 tgcggagtgg atgtcttttt cttttttcgt tttttgacgt gttgcgactc ctcttttttg
     1861 tcaactggct catcatcaat tatttcgtat gttggaggca aatgtgccat ggaacctgca
     1921 actttcaagt atattaaact attagtgttc aaaatccaag gctaaaagga tgataaagta
     1981 taagggtgga tatagttgat agttgttagg gttgaagaaa aaatgcaaac atataagttc
     2041 gtcatccgtc gctatcaata tagttggcga aactgatctt tgtcaacaga tttggttcaa
     2101 atcgtttttg tgtattgctc ggaatctgag accagatgca cctattagtt gttgcctact
     2161 gctagaccct tatctcagct tgtggtcgca attatggacg ggtcaagtga catcttgaaa
     2221 ctactctttc ggaacaggca ctttatagta atacttgcta gatggtttgg tctattgcta
     2281 atggatcttc aagatcttta aagacgtaca agaaatttgt cacttttgta gaatttctta
     2341 atatcatggg atcacaaggt cacaagtaat acgaatgaaa tttaaaaaaa tgttaacttg
     2401 ctgattgatt aatcggtatt tatttaagct taatgtaatg agcatcttat gctatccaag
     2461 aggataccgg tcatgtaaat tatggtatgt ggttattata aaaaacaagg ttggtttgac
     2521 ttatgctggt caaactaatg ttggttatgg gatgtgtttg tacattttgc ttcttatctt
     2581 taggggcctg aaaataattc cccctttttt ttgcatttta tttttccgaa aatggtactt
     2641 tctcgcatta gaaaacggct tatcttacta cacaattatg tcactgtctt tgttatttac
     2701 atgagcaaac aaattatatg tagctaaccc gaatgtctga ttgttacttc aaatagaaaa
     2761 atcaaatcac aaaatagtac cacattagct aatatgtctt tctagtggct ttactgactg
     2821 caatt
//
LOCUS       XR_011757293            2840 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X6, ncRNA.
ACCESSION   XR_011757293
VERSION     XR_011757293.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2840
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2840
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtggtataa cccgactgtg atacaacaat atttggttgt
     1801 ggcaattttc atcgacataa agattctaat tgaaggtggc aattattgcc catttacttg
     1861 cagtcgggtc gttgaggtac ttccagaagg ctttagctac ttatgagtta taaggcgctt
     1921 tcatgcagtt gaaatacaac tgcatcagcc ttttgtgcaa aaaaagtgtg cggagtggat
     1981 gtctttttct tttttcgttt tttgacgtgt tgcgactcct cttttttgtc aactggctca
     2041 tcatcaatta tttcgtatgt tggaggcaaa tgtgccatgg aacctgcaac tttcaagtat
     2101 attaaactat tagtgttcaa aatccaaggc taaaaggatg ataaagtata agggtggata
     2161 tagttgatag ttgttagggt tgaagaaaaa atgcaaacat ataagttcgt catccgtcgc
     2221 tatcaatata gttggcgaaa ctgatctttg tcaacagatt tggttcaaat cgtttttgtg
     2281 tattgctcgg aatctgagac cagatgcacc tattagttgt tgcctactgc tagaccctta
     2341 tctcagcttg tggtcgcaat tatggacggg tcaagtgaca tcttgaaact actctttcgg
     2401 aacaggcact ttatagtaat acttgctaga tggtttggtc tattgctaat ggatcttcaa
     2461 ggttcaagat attgagaaag ggtccagtcc atcatctcta cacataattt cttcactgag
     2521 cccttagtcg ccaaaccttt taacattgag ttcctttcag aacctcggtt gctctctagt
     2581 aagtgcattt catttttcta aatttgaaaa catttcaaac tagcactttg ttttggtatg
     2641 actataaata aaaagtcaag gccaatcatt gtcacatgtt ggtttattcc taccgaagcc
     2701 cgttttcaat catggaaaac tttatgttga tctatccaga gttacatcta aaaaatgact
     2761 taaagtgctt attttaaaca aagataaaga attatcaagc acaactaaaa atgttgtcta
     2821 caaagcagtt ttgcaccaat
//
LOCUS       XR_011757294            2772 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X7, ncRNA.
ACCESSION   XR_011757294
VERSION     XR_011757294.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2772
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2772
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt gttcgattaa atgtcagata ggcttcaaca
     1021 tcaagattta gtggtgaata tgagaagaca atctgacggc tttacatctt tattagaatt
     1081 ggaacaagta aattcttcga ttatacaaaa ctatggtatc catttctggt tgttgaaaaa
     1141 gggcgttggt ggttattcat tgtattgccg acacttgcac catctccgcc gttgaatatg
     1201 agtgaatttt actgacattg attgagtata aaatttgcaa tttgattgag tgaatgtgtt
     1261 ataccgacat ttaatttttt caatttcttt tgggcaggtt gtagcatgtg cctttgtttg
     1321 taattctgtt tgcctttaga tggtactaat tgacgctttt tgagatctgc ctctcttcac
     1381 gacatacaaa cactgcactt gtgatgttta agatcgactt ttgtgggatc ttgcaattga
     1441 ttgattgatt gtggtacaac aatatttggt tgtggcaatt ttcatcgact gtgatacaac
     1501 aatatttgat tgattgattg tggtacaaca atatttgatt gtggtataac ccgactgtga
     1561 tacaacaata tttggttgtg gcaattttca tcgacataaa gattctaatt gaaggtggca
     1621 attattgccc atttacttgc agtcgggtcg ttgaggtact tccagaaggc tttagctact
     1681 tatgagttat aaggcgcttt catgcagttg aaatacaact gcatcagcct tttgtgcaaa
     1741 aaaagtgtgc ggagtggatg tctttttctt ttttcgtttt ttgacgtgtt gcgactcctc
     1801 ttttttgtca actggctcat catcaattat ttcgtatgtt ggaggcaaat gtgccatgga
     1861 acctgcaact ttcaagtata ttaaactatt agtgttcaaa atccaaggct aaaaggatga
     1921 taaagtataa gggtggatat agttgatagt tgttagggtt gaagaaaaaa tgcaaacata
     1981 taagttcgtc atccgtcgct atcaatatag ttggcgaaac tgatctttgt caacagattt
     2041 ggttcaaatc gtttttgtgt attgctcgga atctgagacc agatgcacct attagttgtt
     2101 gcctactgct agacccttat ctcagcttgt ggtcgcaatt atggacgggt caagtgacat
     2161 cttgaaacta ctctttcgga acaggcactt tatagtaata cttgctagat ggtttggtct
     2221 attgctaatg gatcttcaag atctttaaag acgtacaaga aatttgtcac ttttgtagaa
     2281 tttcttaata tcatgggatc acaaggtcac aagtaatacg aatgaaattt aaaaaaatgt
     2341 taacttgctg attgattaat cggtatttat ttaagcttaa tgtaatgagc atcttatgct
     2401 atccaagagg ataccggtca tgtaaattat ggtatgtggt tattataaaa aacaaggttg
     2461 gtttgactta tgctggtcaa actaatgttg gttatgggat gtgtttgtac attttgcttc
     2521 ttatctttag gggcctgaaa ataattcccc cttttttttg cattttattt ttccgaaaat
     2581 ggtactttct cgcattagaa aacggcttat cttactacac aattatgtca ctgtctttgt
     2641 tatttacatg agcaaacaaa ttatatgtag ctaacccgaa tgtctgattg ttacttcaaa
     2701 tagaaaaatc aaatcacaaa atagtaccac attagctaat atgtctttct agtggcttta
     2761 ctgactgcaa tt
//
LOCUS       XR_011757295            2714 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X8, ncRNA.
ACCESSION   XR_011757295
VERSION     XR_011757295.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2714
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2714
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtggtataa cccgactgtg atacaacaat atttggttgt
     1801 ggcaattttc atcgacataa agattctaat tgaaggtggc aattattgcc catttacttg
     1861 cagtcgggtc gttgaggtac ttccagaagg ctttagctac ttatgagtta taaggcgctt
     1921 tcatgcagtt gaaatacaac tgcatcagcc ttttgtgcaa aaaaagtgtg cggagtggat
     1981 gtctttttct tttttcgttt tttgacgtgt tgcgactcct cttttttgtc aactggctca
     2041 tcatcaatta tttcgtatgt tggaggcaaa tgtgccatgg aacctgcaac tttcaagtat
     2101 attaaactat tagtgttcaa aatccaaggc taaaaggatg ataaagtata agggtggata
     2161 tagttgatag ttgttagggt tgaagaaaaa atgcaaacat ataagttcgt catccgtcgc
     2221 tatcaatata gttggcgaaa ctgatctttg tcaacagatt tggttcaaat cgtttttgtg
     2281 tattgctcgg aatctgagac cagatgcacc tattagttgt tgcctactgc tagaccctta
     2341 tctcagcttg tggtcgcaat tatggacggg tcaagtgaca tcttgaaact actctttcgg
     2401 aacaggcact ttatagtaat acttgctaga tggtttggtc tattgctaat ggatcttcaa
     2461 ggttcaagat attgagaaag ggtccagtcc atcatctcta cacataattt cttcactgag
     2521 cccttagtcg ccaaaccttt taacattgag ttcctttcag aacctcggtt gctctctagt
     2581 aaaagcgttt acaattcatc gtttatttta caagaaatca cgttcacatc aattcgtaac
     2641 tttatattgt gtaatcaatc tatgtgtgta ctataattta tcaaactttt tactaatatg
     2701 tgttgtttac gaag
//
LOCUS       XR_011757296            2984 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X9, ncRNA.
ACCESSION   XR_011757296
VERSION     XR_011757296.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2984
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2984
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtggtataa cccgactgtg atacaacaat atttggttgt
     1801 ggcaattttc atcgacataa agattctaat tgaaggtggc aattattgcc catttacttg
     1861 cagtcgggtc gttgaggtac ttccagaagg ctttagctac ttatgagtta taaggcgctt
     1921 tcatgcagtt gaaatacaac tgcatcagcc ttttgtgcaa aaaaagtgtg cggagtggat
     1981 gtctttttct tttttcgttt tttgacgtgt tgcgactcct cttttttgtc aactggctca
     2041 tcatcaatta tttcgtatgt tggaggcaaa tgtgccatgg aacctgcaac tttcaagtat
     2101 attaaactat tagtgttcaa aatccaaggc taaaaggatg ataaagtata agggtggata
     2161 tagttgatgg ttgaagaaaa aatgcaaaca tataagttcg tcatccgtcg ctatcaatat
     2221 agttggcgaa actgatcttt gtcaacagat ttggttcaaa tcgtttttgt gtattgctcg
     2281 gaatctgaga ccagatgcac ctattagttg ttgcctactg ctagaccctt atctcagctt
     2341 gtggtcgcaa ttatggacgg gtcaagtgac atcttgaaac tactctttcg gaacaggcac
     2401 tttatagtaa tacttgctag atggtttggt ctattgctaa tggatcttca agatctttaa
     2461 agacgtacaa gaaatttgtc acttttgtag aatttcttaa tatcatggga tcacaaggtc
     2521 acaagtaata cgaatgaaat ttaaaaaaat gttaacttgc tgattgatta atcggtattt
     2581 atttaagctt aatgtaatga gcatcttatg ctatccaaga ggataccggt catgtaaatt
     2641 atggtatgtg gttattataa aaaacaaggt tggtttgact tatgctggtc aaactaatgt
     2701 tggttatggg atgtgtttgt acattttgct tcttatcttt aggggcctga aaataattcc
     2761 cccttttttt tgcattttat ttttccgaaa atggtacttt ctcgcattag aaaacggctt
     2821 atcttactac acaattatgt cactgtcttt gttatttaca tgagcaaaca aattatatgt
     2881 agctaacccg aatgtctgat tgttacttca aatagaaaaa tcaaatcaca aaatagtacc
     2941 acattagcta atatgtcttt ctagtggctt tactgactgc aatt
//
LOCUS       XR_011757297            2988 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X10, ncRNA.
ACCESSION   XR_011757297
VERSION     XR_011757297.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2988
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2988
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtggtataa cccgactgtg atacaacaat atttggttgt
     1801 ggcaattttc atcgacataa agattctaat tgaaggtggc aattattgcc catttacttg
     1861 cagtcgggtc gttgaggtac ttccagaagg ctttagctac ttatgagtta taaggcgctt
     1921 tcatgcagtt gaaatacaac tgcatcagcc ttttgtgcaa aaaaagtgtg cggagtggat
     1981 gtctttttct tttttcgttt tttgacgtgt tgcgactcct cttttttgtc aactggctca
     2041 tcatcaatta tttcgtatgt tggaggcaaa tgtgccatgg aacctgcaac tttcaagtat
     2101 attaaactat tagtgttcaa aatccaaggc taaaaggatg ataaagtata agggtggata
     2161 tagttgatag ttgttagggt tgaagaaaaa atgcaaacat ataagttcgt catccgtcgc
     2221 tatcaatata gttggcgaaa ctgatctttg tcaacagatt tggttcaaat cgtttttgtg
     2281 tattgctcgg aatctgagac cagatgcacc tattagttgt tgcctactgc tagaccctta
     2341 tcttgtggtc gcaattatgg acgggtcaag tgacatcttg aaactactct ttcggaacag
     2401 gcactttata gtaatacttg ctagatggtt tggtctattg ctaatggatc ttcaagatct
     2461 ttaaagacgt acaagaaatt tgtcactttt gtagaatttc ttaatatcat gggatcacaa
     2521 ggtcacaagt aatacgaatg aaatttaaaa aaatgttaac ttgctgattg attaatcggt
     2581 atttatttaa gcttaatgta atgagcatct tatgctatcc aagaggatac cggtcatgta
     2641 aattatggta tgtggttatt ataaaaaaca aggttggttt gacttatgct ggtcaaacta
     2701 atgttggtta tgggatgtgt ttgtacattt tgcttcttat ctttaggggc ctgaaaataa
     2761 ttcccccttt tttttgcatt ttatttttcc gaaaatggta ctttctcgca ttagaaaacg
     2821 gcttatctta ctacacaatt atgtcactgt ctttgttatt tacatgagca aacaaattat
     2881 atgtagctaa cccgaatgtc tgattgttac ttcaaataga aaaatcaaat cacaaaatag
     2941 taccacatta gctaatatgt ctttctagtg gctttactga ctgcaatt
//
LOCUS       XR_011757298            2897 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X11, ncRNA.
ACCESSION   XR_011757298
VERSION     XR_011757298.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2897
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2897
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2897
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagttgtagc atgtgccttt
     1441 gtttgtaatt ctgtttgcct ttagatggta ctaattgacg ctttttgaga tctgcctctc
     1501 ttcacgacat acaaacactg cacttgtgat gtttaagatc gacttttgtg ggatcttgca
     1561 attgattgat tgattgtggt acaacaatat ttggttgtgg caattttcat cgactgtgat
     1621 acaacaatat ttgattgatt gattgtggta caacaatatt tgattgtggt ataacccgac
     1681 tgtgatacaa caatatttgg ttgtggcaat tttcatcgac ataaagattc taattgaagg
     1741 tggcaattat tgcccattta cttgcagtcg ggtcgttgag gtacttccag aaggctttag
     1801 ctacttatga gttataaggc gctttcatgc agttgaaata caactgcatc agccttttgt
     1861 gcaaaaaaag tgtgcggagt ggatgtcttt ttcttttttc gttttttgac gtgttgcgac
     1921 tcctcttttt tgtcaactgg ctcatcatca attatttcgt atgttggagg caaatgtgcc
     1981 atggaacctg caactttcaa gtatattaaa ctattagtgt tcaaaatcca aggctaaaag
     2041 gatgataaag tataagggtg gatatagttg atagttgtta gggttgaaga aaaaatgcaa
     2101 acatataagt tcgtcatccg tcgctatcaa tatagttggc gaaactgatc tttgtcaaca
     2161 gatttggttc aaatcgtttt tgtgtattgc tcggaatctg agaccagatg cacctattag
     2221 ttgttgccta ctgctagacc cttatctcag cttgtggtcg caattatgga cgggtcaagt
     2281 gacatcttga aactactctt tcggaacagg cactttatag taatacttgc tagatggttt
     2341 ggtctattgc taatggatct tcaagatctt taaagacgta caagaaattt gtcacttttg
     2401 tagaatttct taatatcatg ggatcacaag gtcacaagta atacgaatga aatttaaaaa
     2461 aatgttaact tgctgattga ttaatcggta tttatttaag cttaatgtaa tgagcatctt
     2521 atgctatcca agaggatacc ggtcatgtaa attatggtat gtggttatta taaaaaacaa
     2581 ggttggtttg acttatgctg gtcaaactaa tgttggttat gggatgtgtt tgtacatttt
     2641 gcttcttatc tttaggggcc tgaaaataat tccccctttt ttttgcattt tatttttccg
     2701 aaaatggtac tttctcgcat tagaaaacgg cttatcttac tacacaatta tgtcactgtc
     2761 tttgttattt acatgagcaa acaaattata tgtagctaac ccgaatgtct gattgttact
     2821 tcaaatagaa aaatcaaatc acaaaatagt accacattag ctaatatgtc tttctagtgg
     2881 ctttactgac tgcaatt
//
LOCUS       XR_011757299            2783 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X12, ncRNA.
ACCESSION   XR_011757299
VERSION     XR_011757299.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2783
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2783
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X12"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt tgtagcatgt
     1321 gcctttgttt gtaattctgt ttgcctttag atggtactaa ttgacgcttt ttgagatctg
     1381 cctctcttca cgacatacaa acactgcact tgtgatgttt aagatcgact tttgtgggat
     1441 cttgcaattg attgattgat tgtggtacaa caatatttgg ttgtggcaat tttcatcgac
     1501 tgtgatacaa caatatttga ttgattgatt gtggtacaac aatatttgat tgtggtataa
     1561 cccgactgtg atacaacaat atttggttgt ggcaattttc atcgacataa agattctaat
     1621 tgaaggtggc aattattgcc catttacttg cagtcgggtc gttgaggtac ttccagaagg
     1681 ctttagctac ttatgagtta taaggcgctt tcatgcagtt gaaatacaac tgcatcagcc
     1741 ttttgtgcaa aaaaagtgtg cggagtggat gtctttttct tttttcgttt tttgacgtgt
     1801 tgcgactcct cttttttgtc aactggctca tcatcaatta tttcgtatgt tggaggcaaa
     1861 tgtgccatgg aacctgcaac tttcaagtat attaaactat tagtgttcaa aatccaaggc
     1921 taaaaggatg ataaagtata agggtggata tagttgatag ttgttagggt tgaagaaaaa
     1981 atgcaaacat ataagttcgt catccgtcgc tatcaatata gttggcgaaa ctgatctttg
     2041 tcaacagatt tggttcaaat cgtttttgtg tattgctcgg aatctgagac cagatgcacc
     2101 tattagttgt tgcctactgc tagaccctta tctcagcttg tggtcgcaat tatggacggg
     2161 tcaagtgaca tcttgaaact actctttcgg aacaggcact ttatagtaat acttgctaga
     2221 tggtttggtc tattgctaat ggatcttcaa gatctttaaa gacgtacaag aaatttgtca
     2281 cttttgtaga atttcttaat atcatgggat cacaaggtca caagtaatac gaatgaaatt
     2341 taaaaaaatg ttaacttgct gattgattaa tcggtattta tttaagctta atgtaatgag
     2401 catcttatgc tatccaagag gataccggtc atgtaaatta tggtatgtgg ttattataaa
     2461 aaacaaggtt ggtttgactt atgctggtca aactaatgtt ggttatggga tgtgtttgta
     2521 cattttgctt cttatcttta ggggcctgaa aataattccc cctttttttt gcattttatt
     2581 tttccgaaaa tggtactttc tcgcattaga aaacggctta tcttactaca caattatgtc
     2641 actgtctttg ttatttacat gagcaaacaa attatatgta gctaacccga atgtctgatt
     2701 gttacttcaa atagaaaaat caaatcacaa aatagtacca cattagctaa tatgtctttc
     2761 tagtggcttt actgactgca att
//
LOCUS       XR_011757300            2894 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X13, ncRNA.
ACCESSION   XR_011757300
VERSION     XR_011757300.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2894
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2894
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2894
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X13"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtgtcgggt cgttgaggta cttccagaag gctttagcta
     1801 cttatgagtt ataaggcgct ttcatgcagt tgaaatacaa ctgcatcagc cttttgtgca
     1861 aaaaaagtgt gcggagtgga tgtctttttc ttttttcgtt ttttgacgtg ttgcgactcc
     1921 tcttttttgt caactggctc atcatcaatt atttcgtatg ttggaggcaa atgtgccatg
     1981 gaacctgcaa ctttcaagta tattaaacta ttagtgttca aaatccaagg ctaaaaggat
     2041 gataaagtat aagggtggat atagttgata gttgttaggg ttgaagaaaa aatgcaaaca
     2101 tataagttcg tcatccgtcg ctatcaatat agttggcgaa actgatcttt gtcaacagat
     2161 ttggttcaaa tcgtttttgt gtattgctcg gaatctgaga ccagatgcac ctattagttg
     2221 ttgcctactg ctagaccctt atctcagctt gtggtcgcaa ttatggacgg gtcaagtgac
     2281 atcttgaaac tactctttcg gaacaggcac tttatagtaa tacttgctag atggtttggt
     2341 ctattgctaa tggatcttca agatctttaa agacgtacaa gaaatttgtc acttttgtag
     2401 aatttcttaa tatcatggga tcacaaggtc acaagtaata cgaatgaaat ttaaaaaaat
     2461 gttaacttgc tgattgatta atcggtattt atttaagctt aatgtaatga gcatcttatg
     2521 ctatccaaga ggataccggt catgtaaatt atggtatgtg gttattataa aaaacaaggt
     2581 tggtttgact tatgctggtc aaactaatgt tggttatggg atgtgtttgt acattttgct
     2641 tcttatcttt aggggcctga aaataattcc cccttttttt tgcattttat ttttccgaaa
     2701 atggtacttt ctcgcattag aaaacggctt atcttactac acaattatgt cactgtcttt
     2761 gttatttaca tgagcaaaca aattatatgt agctaacccg aatgtctgat tgttacttca
     2821 aatagaaaaa tcaaatcaca aaatagtacc acattagcta atatgtcttt ctagtggctt
     2881 tactgactgc aatt
//
LOCUS       XR_011757301            2723 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840262), transcript variant X14, ncRNA.
ACCESSION   XR_011757301
VERSION     XR_011757301.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2723
                     /gene="LOC139840262"
                     /note="uncharacterized LOC139840262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840262"
     ncRNA           1..2723
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840262"
                     /product="uncharacterized lncRNA, transcript variant X14"
                     /db_xref="GeneID:139840262"
ORIGIN      
        1 ctgaatgctc tttgctggaa ggatagcaaa attaaagtaa ataactcttc ctggttgggt
       61 ttttataacg tgtccatggt tgctttctaa ggctctgttc cagagatcat atttggagag
      121 aaaggaaagg atttgaaaag aattgaaaaa caatttgtgt tactgagttt tgattttaat
      181 gaagggaaag gaaaaggaat gatgatttta gcctaatttt cactccaatc tttccttcca
      241 aattgggagg atcccaaatc cactcctttc ctttcagttc agttcatttc atttcatttc
      301 atttattttg ggcaaaatct gtggaacaga gctaagagtt taaaaaaaaa tcgtcttcca
      361 cacggatgaa aaattagggt tccgtttttc tttcaatttt tccctacttc aaaagaaaag
      421 ttgtgtgttc atcgatgatt atgacaacca ccatccaccg cggctatgac ggttgtaaca
      481 gcagccacaa cggcggtgga tgtaacgacg gcgatagatg aataagagga tgctgcatct
      541 tgcaagtgca attcaattag gtaagcactt catttcttat gaatggcaat taaagatcta
      601 ttctatgaag tttacccaag attcaattaa catgttttat tttttaggat aaaagcaatc
      661 aacgtgtttg gtcctttctt atataattat atatatgtca tggagaattc ttaagaatat
      721 tgtgaccttt gattattatc agttcttggt gctttgaagg taaaggttaa atggtatttc
      781 aaaccttttc atttcatgga ggtgatgaca cgagcaaatg tatattttct ttttaccctg
      841 acatcgaaag ctttccaaca ttatgtgtat tttgcgtact aagtgaagct tccattaaaa
      901 tcacgacatg atgaggagtg gaggcatcta gaagaggagc tgaatttaca taaggatgtg
      961 ttctttcagt acatctatct aatcaagtgt agtactttta cagctatctt atattgtgaa
     1021 aatgtgatta tattgtgatg attttgttat gttcaaacag gctttttatt ttttggaatg
     1081 atgcagatta gtattaattt gatgagttac tgtaattttt taaatcctat tttgtatttg
     1141 tatgtttgat ttgcagttcc tctgtttcgg ttacccattg tgattttgtg tgttttggat
     1201 gcacactagg tgttcgatta aatgtcagat aggcttcaac atcaagattt agtggtgaat
     1261 atgagaagac aatctgacgg ctttacatct ttattagaat tggaacaagt aaattcttcg
     1321 attatacaaa actatggtat ccatttctgg ttgttgaaaa agggcgttgg tggttattca
     1381 ttgtattgcc gacacttgca ccatctccgc cgttgaatat gagtgaattt tactgacatt
     1441 gattgagtat aaaatttgca atttgattga gtgaatgtgt tataccgaca tttaattttt
     1501 tcaatttctt ttgggcaggt tgtagcatgt gcctttgttt gtaattctgt ttgcctttag
     1561 atggtactaa ttgacgcttt ttgagatctg cctctcttca cgacatacaa acactgcact
     1621 tgtgatgttt aagatcgact tttgtgggat cttgcaattg attgattgat tgtggtacaa
     1681 caatatttgg ttgtggcaat tttcatcgac tgtgatacaa caatatttga ttgattgatt
     1741 gtggtacaac aatatttgat tgtggtataa cccgactgtg atacaacaat atttggttgt
     1801 ggcaattttc atcgacataa agattctaat tgaaggtggc aattattgcc catttacttg
     1861 cagtcgggtc gttgaggtac ttccagaagg ctttagctac ttatgagggt tgaagaaaaa
     1921 atgcaaacat ataagttcgt catccgtcgc tatcaatata gttggcgaaa ctgatctttg
     1981 tcaacagatt tggttcaaat cgtttttgtg tattgctcgg aatctgagac cagatgcacc
     2041 tattagttgt tgcctactgc tagaccctta tctcagcttg tggtcgcaat tatggacggg
     2101 tcaagtgaca tcttgaaact actctttcgg aacaggcact ttatagtaat acttgctaga
     2161 tggtttggtc tattgctaat ggatcttcaa gatctttaaa gacgtacaag aaatttgtca
     2221 cttttgtaga atttcttaat atcatgggat cacaaggtca caagtaatac gaatgaaatt
     2281 taaaaaaatg ttaacttgct gattgattaa tcggtattta tttaagctta atgtaatgag
     2341 catcttatgc tatccaagag gataccggtc atgtaaatta tggtatgtgg ttattataaa
     2401 aaacaaggtt ggtttgactt atgctggtca aactaatgtt ggttatggga tgtgtttgta
     2461 cattttgctt cttatcttta ggggcctgaa aataattccc cctttttttt gcattttatt
     2521 tttccgaaaa tggtactttc tcgcattaga aaacggctta tcttactaca caattatgtc
     2581 actgtctttg ttatttacat gagcaaacaa attatatgta gctaacccga atgtctgatt
     2641 gttacttcaa atagaaaaat caaatcacaa aatagtacca cattagctaa tatgtctttc
     2701 tagtggcttt actgactgca att
//
LOCUS       XM_071830514            2357 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL10 (LOC139840264), transcript
            variant X1, mRNA.
ACCESSION   XM_071830514
VERSION     XM_071830514.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2357
                     /gene="LOC139840264"
                     /note="probable serine/threonine-protein kinase PBL10;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840264"
     CDS             81..1883
                     /gene="LOC139840264"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686615.1"
                     /db_xref="GeneID:139840264"
                     /translation="MANQYFPDNKPYQIIASYLQKEFQKSSLSSFQRTMDSINIFAAL
                     THVCLHCTTTNHRLTMADVITELRKSQTLHLGVEVVSLQEIKSATNCFNNQNVIAKGS
                     SGTIYKGELTLTMGLKVFAVKRFDEIDCFGENAFLKKVTMFSLCVHDNIMPLRGFCEE
                     DNEKIIIMEHASNGSLDGHINKSSLTWGLRLKIAISVAKGLSHIHSLDNIQSTYHGDI
                     IKTSKILLDGDWKASILYFVTSKGHDRLGYLDPLLLSDGATTTGSDFYAFGVVLFQIL
                     SGKLAIEKAEKYPQDKLRKIISREQKSDAEYEYEDEYEDEYEVFLGWLAVRCYEDRIL
                     EEITFHDLKTQTESISIFSEVAYLCLKKDRPNMAWVISKLEEALNIHNEWECEQKLRD
                     YEDILKMSKYMPSNKITKKELYARLCLGMSIDNGKMWVSLNKDGKTNELISATEFEYK
                     NLRILKWRSEKSSRVTQITIENRMITGTCRFSKVAKISETSDLNIKIQIKTKFLSEGV
                     IYGAYLVFKFCDSRMVSSDTYVNLKYKTSTGSYNSYIAKGRDDAWKMIELCKFEDHSQ
                     IIDFEVQLKRFHGHSCGSGPIFIEGIEFQPIDDN"
     misc_feature    372..1208
                     /gene="LOC139840264"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(372..383,390..392,396..398,441..443,447..449,
                     534..536,582..593,729..731,744..749,753..755,783..788)
                     /gene="LOC139840264"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1518..1868
                     /gene="LOC139840264"
                     /note="Phloem protein 2; Region: PP2; pfam14299"
                     /db_xref="CDD:464128"
ORIGIN      
        1 actctcttgg cgtggttttg ttggaagtgt tttgtgggag gtttgtaatc actcgaaatg
       61 aaaaatataa tctagttaac atggccaatc aatatttccc agacaataaa ccataccaga
      121 tcattgcttc gtatctacag aaagagtttc agaaaagttc cttgtcatca ttccagagaa
      181 ccatggattc cataaacata tttgcagctt taacacatgt ttgcttacat tgcactacaa
      241 ccaatcaccg cctcacaatg gctgatgtca tcactgaact tagaaaatcg cagacattgc
      301 acctaggggt tgaagttgtt tctttacaag aaatcaagtc tgccacaaat tgtttcaata
      361 atcaaaatgt tattgcgaag ggatcgtctg gtacaattta caaaggagaa ctcactctta
      421 ctatgggact aaaagtgttt gctgtaaaaa ggtttgatga gattgattgt tttggagaaa
      481 atgcattctt aaaaaaggtt acaatgtttt ctctttgtgt gcatgataac atcatgccgc
      541 ttcgaggctt ttgtgaagaa gataatgaga aaatcattat tatggagcat gcgagtaatg
      601 gaagtcttga tgggcatata aacaaatcta gtctcacatg gggactaaga ctcaagatag
      661 ctattagtgt tgcgaaaggg ctatctcata ttcattcttt ggataatatt caaagcacat
      721 accacggtga cattataaaa actagcaaga ttctacttga tggtgactgg aaagcatcaa
      781 tcttatattt tgttacatct aaaggtcatg acaggctagg ctatcttgat ccgttacttt
      841 tgtcagatgg tgcaacaaca acaggatcag atttttatgc atttggagtc gttttatttc
      901 agatattatc tgggaagttg gcaatagaaa aggcagaaaa gtatccacaa gataaacttc
      961 gaaaaattat aagccgtgaa caaaaaagtg atgcagaata tgaatacgaa gatgaatatg
     1021 aagatgagta cgaagttttc cttggttggt tggcagtacg ctgctacgaa gaccgcatac
     1081 tagaagagat cacctttcac gatcttaaaa cccaaacaga atcgataagt atattttcag
     1141 aagttgccta cctgtgcttg aaaaaagatc gtccgaatat ggcttgggtg atatctaaac
     1201 ttgaggaagc tctcaacatc cataatgagt gggaatgtga gcaaaaattg cgtgattatg
     1261 aggatatatt gaagatgtcc aaatatatgc catccaataa aatcaccaaa aaggaacttt
     1321 atgctcgtct ttgtttagga atgtccattg acaatggaaa aatgtgggtt tcattaaaca
     1381 aggatggaaa gacgaatgaa ttgatatccg ctacagagtt tgaatacaaa aatcttagga
     1441 ttctcaagtg gagatctgaa aaatcatcaa gggtcactca aattactatt gagaatagaa
     1501 tgataactgg tacttgcagg ttctcaaagg ttgcaaagat ttcagagacg tcagatctca
     1561 acatcaaaat tcagataaaa actaagtttt tatctgaagg ggtcatttat ggggcttact
     1621 tagtgttcaa attttgtgat tcacgaatgg tttcaagtga cacatatgtg aacctaaaat
     1681 ataaaacatc aacgggatcc tataattcat atattgcaaa gggaagagat gatgcgtgga
     1741 agatgattga attatgtaaa tttgaggatc atagtcaaat tattgatttt gaggttcagc
     1801 taaagagatt tcatggccat tcttgtggaa gcggtcccat ttttatagaa ggcatcgagt
     1861 ttcaacccat cgatgataat tgataacaga cttcgtcaat tgtaaaatct ttcaatttcc
     1921 atcctttaac aacatccagg gtgcaatatg cacataattt cgtggggtga atcaagtaat
     1981 gtgtaactgt tcgaatgaga tcatacctgg atagttgcga gctaagaaca agcttgaggt
     2041 caaggttaaa gtgaaagaag ctcaaaataa tagaagacta aggattagtt tgtcgatttc
     2101 tttatttgta attttgttgt ttattataat tttttcccta aaataatctg tgttcaaaat
     2161 tggaatgaag tagctgtatt ggaggtaaca agtaatatgg aagtttttgt aatattgtca
     2221 aaaatagaat acgatatgtt tcatgttttg caatatgtag catttgacag tgtgtgtaca
     2281 tgaatggcaa aaatgcagtt gctatacagc agtttgtaat atgcagaaaa gttttgcaaa
     2341 ctgcacaaaa gtttatt
//
LOCUS       XM_071830515            2307 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL10 (LOC139840264), transcript
            variant X2, mRNA.
ACCESSION   XM_071830515
VERSION     XM_071830515.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2307
                     /gene="LOC139840264"
                     /note="probable serine/threonine-protein kinase PBL10;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840264"
     CDS             81..1835
                     /gene="LOC139840264"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686616.1"
                     /db_xref="GeneID:139840264"
                     /translation="MANQYFPDNKPYQIIASYLQKEFQKSSLSSFQRTMDSINIFAAL
                     THVCLHCTTTNHRLTMADVITELRKSQTLHLGVEVVSLQEIKSATNCFNNQNVIAKGS
                     SGTIYKGELTLTMGLKVFAVKRFDEIDCFGENAFLKKVTMFSLCVHDNIMPLRGFCEE
                     DNEKIIIMEHASNGSLDGHINKSSLTWGLRLKIAISVAKGLSHIHSLDNIQSTYHGDI
                     IKTSKILLDGDWKASILYFVTSKGHDRLGYLDPLLLSDGATTTGSDFYAFGVVLFQIL
                     SGKLAIEKAEKYPQDKLRKIISREQKSDAEYEYEDEYEDEYEVFLGWLAVRCYEDRIL
                     EEITFHDLKTQTESISIFSEVAYLCLKKDRPNMAWVISKLEEALNIHNEWECEQKLRD
                     YEDILKMSKYMPSNKITKKELYARLCLGMSIDNGKMWVSLNKDGKTNELISATEFEYK
                     NLRILKWRSEKSSRFSKVAKISETSDLNIKIQIKTKFLSEGVIYGAYLVFKFCDSRMV
                     SSDTYVNLKYKTSTGSYNSYIAKGRDDAWKMIELCKFEDHSQIIDFEVQLKRFHGHSC
                     GSGPIFIEGIEFQPIDDN"
     misc_feature    372..1208
                     /gene="LOC139840264"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(372..383,390..392,396..398,441..443,447..449,
                     534..536,582..593,729..731,744..749,753..755,783..788)
                     /gene="LOC139840264"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1446..1820
                     /gene="LOC139840264"
                     /note="Phloem protein 2; Region: PP2; pfam14299"
                     /db_xref="CDD:464128"
ORIGIN      
        1 actctcttgg cgtggttttg ttggaagtgt tttgtgggag gtttgtaatc actcgaaatg
       61 aaaaatataa tctagttaac atggccaatc aatatttccc agacaataaa ccataccaga
      121 tcattgcttc gtatctacag aaagagtttc agaaaagttc cttgtcatca ttccagagaa
      181 ccatggattc cataaacata tttgcagctt taacacatgt ttgcttacat tgcactacaa
      241 ccaatcaccg cctcacaatg gctgatgtca tcactgaact tagaaaatcg cagacattgc
      301 acctaggggt tgaagttgtt tctttacaag aaatcaagtc tgccacaaat tgtttcaata
      361 atcaaaatgt tattgcgaag ggatcgtctg gtacaattta caaaggagaa ctcactctta
      421 ctatgggact aaaagtgttt gctgtaaaaa ggtttgatga gattgattgt tttggagaaa
      481 atgcattctt aaaaaaggtt acaatgtttt ctctttgtgt gcatgataac atcatgccgc
      541 ttcgaggctt ttgtgaagaa gataatgaga aaatcattat tatggagcat gcgagtaatg
      601 gaagtcttga tgggcatata aacaaatcta gtctcacatg gggactaaga ctcaagatag
      661 ctattagtgt tgcgaaaggg ctatctcata ttcattcttt ggataatatt caaagcacat
      721 accacggtga cattataaaa actagcaaga ttctacttga tggtgactgg aaagcatcaa
      781 tcttatattt tgttacatct aaaggtcatg acaggctagg ctatcttgat ccgttacttt
      841 tgtcagatgg tgcaacaaca acaggatcag atttttatgc atttggagtc gttttatttc
      901 agatattatc tgggaagttg gcaatagaaa aggcagaaaa gtatccacaa gataaacttc
      961 gaaaaattat aagccgtgaa caaaaaagtg atgcagaata tgaatacgaa gatgaatatg
     1021 aagatgagta cgaagttttc cttggttggt tggcagtacg ctgctacgaa gaccgcatac
     1081 tagaagagat cacctttcac gatcttaaaa cccaaacaga atcgataagt atattttcag
     1141 aagttgccta cctgtgcttg aaaaaagatc gtccgaatat ggcttgggtg atatctaaac
     1201 ttgaggaagc tctcaacatc cataatgagt gggaatgtga gcaaaaattg cgtgattatg
     1261 aggatatatt gaagatgtcc aaatatatgc catccaataa aatcaccaaa aaggaacttt
     1321 atgctcgtct ttgtttagga atgtccattg acaatggaaa aatgtgggtt tcattaaaca
     1381 aggatggaaa gacgaatgaa ttgatatccg ctacagagtt tgaatacaaa aatcttagga
     1441 ttctcaagtg gagatctgaa aaatcatcaa ggttctcaaa ggttgcaaag atttcagaga
     1501 cgtcagatct caacatcaaa attcagataa aaactaagtt tttatctgaa ggggtcattt
     1561 atggggctta cttagtgttc aaattttgtg attcacgaat ggtttcaagt gacacatatg
     1621 tgaacctaaa atataaaaca tcaacgggat cctataattc atatattgca aagggaagag
     1681 atgatgcgtg gaagatgatt gaattatgta aatttgagga tcatagtcaa attattgatt
     1741 ttgaggttca gctaaagaga tttcatggcc attcttgtgg aagcggtccc atttttatag
     1801 aaggcatcga gtttcaaccc atcgatgata attgataaca gacttcgtca attgtaaaat
     1861 ctttcaattt ccatccttta acaacatcca gggtgcaata tgcacataat ttcgtggggt
     1921 gaatcaagta atgtgtaact gttcgaatga gatcatacct ggatagttgc gagctaagaa
     1981 caagcttgag gtcaaggtta aagtgaaaga agctcaaaat aatagaagac taaggattag
     2041 tttgtcgatt tctttatttg taattttgtt gtttattata attttttccc taaaataatc
     2101 tgtgttcaaa attggaatga agtagctgta ttggaggtaa caagtaatat ggaagttttt
     2161 gtaatattgt caaaaataga atacgatatg tttcatgttt tgcaatatgt agcatttgac
     2221 agtgtgtgta catgaatggc aaaaatgcag ttgctataca gcagtttgta atatgcagaa
     2281 aagttttgca aactgcacaa aagttta
//
LOCUS       XM_071830517            2214 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL10 (LOC139840264), transcript
            variant X3, mRNA.
ACCESSION   XM_071830517
VERSION     XM_071830517.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2214
                     /gene="LOC139840264"
                     /note="probable serine/threonine-protein kinase PBL10;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840264"
     CDS             81..1742
                     /gene="LOC139840264"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL12
                     isoform X3"
                     /protein_id="XP_071686618.1"
                     /db_xref="GeneID:139840264"
                     /translation="MANQYFPDNKPYQIIASYLQKEFQKSSLSSFQRTMDSINIFAAL
                     THVCLHCTTTNHRLTMADVITELRKSQTLHLGVEVVSLQEIKSATNCFNNQNVIAKGS
                     SGTIYKGELTLTMGLKVFAVKRFDEIDCFGENAFLKKVTMFSLCVHDNIMPLRGFCEE
                     DNEKIIIMEHASNGSLDGHINKSSLTWGLRLKIAISVAKGLSHIHSLDNIQSTYHGDI
                     IKTSKILLDGDWKASILYFVTSKGHDRLGYLDPLLLSDGATTTGSDFYAFGVVLFQIL
                     SGKLAIEKAEKYPQDKLRKIISREQKSDAEYEYEDEYEDEYEVFLGWLAVRCYEDRIL
                     EEITFHDLKTQTESISIFSEVAYLCLKKDRPNMAWVISKLEEALNIHWVSLNKDGKTN
                     ELISATEFEYKNLRILKWRSEKSSRVTQITIENRMITGTCRFSKVAKISETSDLNIKI
                     QIKTKFLSEGVIYGAYLVFKFCDSRMVSSDTYVNLKYKTSTGSYNSYIAKGRDDAWKM
                     IELCKFEDHSQIIDFEVQLKRFHGHSCGSGPIFIEGIEFQPIDDN"
     misc_feature    372..1208
                     /gene="LOC139840264"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(372..383,390..392,396..398,441..443,447..449,
                     534..536,582..593,729..731,744..749,753..755,783..788)
                     /gene="LOC139840264"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1377..1727
                     /gene="LOC139840264"
                     /note="Phloem protein 2; Region: PP2; pfam14299"
                     /db_xref="CDD:464128"
ORIGIN      
        1 actctcttgg cgtggttttg ttggaagtgt tttgtgggag gtttgtaatc actcgaaatg
       61 aaaaatataa tctagttaac atggccaatc aatatttccc agacaataaa ccataccaga
      121 tcattgcttc gtatctacag aaagagtttc agaaaagttc cttgtcatca ttccagagaa
      181 ccatggattc cataaacata tttgcagctt taacacatgt ttgcttacat tgcactacaa
      241 ccaatcaccg cctcacaatg gctgatgtca tcactgaact tagaaaatcg cagacattgc
      301 acctaggggt tgaagttgtt tctttacaag aaatcaagtc tgccacaaat tgtttcaata
      361 atcaaaatgt tattgcgaag ggatcgtctg gtacaattta caaaggagaa ctcactctta
      421 ctatgggact aaaagtgttt gctgtaaaaa ggtttgatga gattgattgt tttggagaaa
      481 atgcattctt aaaaaaggtt acaatgtttt ctctttgtgt gcatgataac atcatgccgc
      541 ttcgaggctt ttgtgaagaa gataatgaga aaatcattat tatggagcat gcgagtaatg
      601 gaagtcttga tgggcatata aacaaatcta gtctcacatg gggactaaga ctcaagatag
      661 ctattagtgt tgcgaaaggg ctatctcata ttcattcttt ggataatatt caaagcacat
      721 accacggtga cattataaaa actagcaaga ttctacttga tggtgactgg aaagcatcaa
      781 tcttatattt tgttacatct aaaggtcatg acaggctagg ctatcttgat ccgttacttt
      841 tgtcagatgg tgcaacaaca acaggatcag atttttatgc atttggagtc gttttatttc
      901 agatattatc tgggaagttg gcaatagaaa aggcagaaaa gtatccacaa gataaacttc
      961 gaaaaattat aagccgtgaa caaaaaagtg atgcagaata tgaatacgaa gatgaatatg
     1021 aagatgagta cgaagttttc cttggttggt tggcagtacg ctgctacgaa gaccgcatac
     1081 tagaagagat cacctttcac gatcttaaaa cccaaacaga atcgataagt atattttcag
     1141 aagttgccta cctgtgcttg aaaaaagatc gtccgaatat ggcttgggtg atatctaaac
     1201 ttgaggaagc tctcaacatc cattgggttt cattaaacaa ggatggaaag acgaatgaat
     1261 tgatatccgc tacagagttt gaatacaaaa atcttaggat tctcaagtgg agatctgaaa
     1321 aatcatcaag ggtcactcaa attactattg agaatagaat gataactggt acttgcaggt
     1381 tctcaaaggt tgcaaagatt tcagagacgt cagatctcaa catcaaaatt cagataaaaa
     1441 ctaagttttt atctgaaggg gtcatttatg gggcttactt agtgttcaaa ttttgtgatt
     1501 cacgaatggt ttcaagtgac acatatgtga acctaaaata taaaacatca acgggatcct
     1561 ataattcata tattgcaaag ggaagagatg atgcgtggaa gatgattgaa ttatgtaaat
     1621 ttgaggatca tagtcaaatt attgattttg aggttcagct aaagagattt catggccatt
     1681 cttgtggaag cggtcccatt tttatagaag gcatcgagtt tcaacccatc gatgataatt
     1741 gataacagac ttcgtcaatt gtaaaatctt tcaatttcca tcctttaaca acatccaggg
     1801 tgcaatatgc acataatttc gtggggtgaa tcaagtaatg tgtaactgtt cgaatgagat
     1861 catacctgga tagttgcgag ctaagaacaa gcttgaggtc aaggttaaag tgaaagaagc
     1921 tcaaaataat agaagactaa ggattagttt gtcgatttct ttatttgtaa ttttgttgtt
     1981 tattataatt ttttccctaa aataatctgt gttcaaaatt ggaatgaagt agctgtattg
     2041 gaggtaacaa gtaatatgga agtttttgta atattgtcaa aaatagaata cgatatgttt
     2101 catgttttgc aatatgtagc atttgacagt gtgtgtacat gaatggcaaa aatgcagttg
     2161 ctatacagca gtttgtaata tgcagaaaag ttttgcaaac tgcacaaaag ttta
//
LOCUS       XM_071830518            2164 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL10 (LOC139840264), transcript
            variant X4, mRNA.
ACCESSION   XM_071830518
VERSION     XM_071830518.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2164
                     /gene="LOC139840264"
                     /note="probable serine/threonine-protein kinase PBL10;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840264"
     CDS             81..1694
                     /gene="LOC139840264"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL10
                     isoform X4"
                     /protein_id="XP_071686619.1"
                     /db_xref="GeneID:139840264"
                     /translation="MANQYFPDNKPYQIIASYLQKEFQKSSLSSFQRTMDSINIFAAL
                     THVCLHCTTTNHRLTMADVITELRKSQTLHLGVEVVSLQEIKSATNCFNNQNVIAKGS
                     SGTIYKGELTLTMGLKVFAVKRFDEIDCFGENAFLKKVTMFSLCVHDNIMPLRGFCEE
                     DNEKIIIMEHASNGSLDGHINKSSLTWGLRLKIAISVAKGLSHIHSLDNIQSTYHGDI
                     IKTSKILLDGDWKASILYFVTSKGHDRLGYLDPLLLSDGATTTGSDFYAFGVVLFQIL
                     SGKLAIEKAEKYPQDKLRKIISREQKSDAEYEYEDEYEDEYEVFLGWLAVRCYEDRIL
                     EEITFHDLKTQTESISIFSEVAYLCLKKDRPNMAWVISKLEEALNIHWVSLNKDGKTN
                     ELISATEFEYKNLRILKWRSEKSSRFSKVAKISETSDLNIKIQIKTKFLSEGVIYGAY
                     LVFKFCDSRMVSSDTYVNLKYKTSTGSYNSYIAKGRDDAWKMIELCKFEDHSQIIDFE
                     VQLKRFHGHSCGSGPIFIEGIEFQPIDDN"
     misc_feature    372..1208
                     /gene="LOC139840264"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(372..383,390..392,396..398,441..443,447..449,
                     534..536,582..593,729..731,744..749,753..755,783..788)
                     /gene="LOC139840264"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1305..1679
                     /gene="LOC139840264"
                     /note="Phloem protein 2; Region: PP2; pfam14299"
                     /db_xref="CDD:464128"
ORIGIN      
        1 actctcttgg cgtggttttg ttggaagtgt tttgtgggag gtttgtaatc actcgaaatg
       61 aaaaatataa tctagttaac atggccaatc aatatttccc agacaataaa ccataccaga
      121 tcattgcttc gtatctacag aaagagtttc agaaaagttc cttgtcatca ttccagagaa
      181 ccatggattc cataaacata tttgcagctt taacacatgt ttgcttacat tgcactacaa
      241 ccaatcaccg cctcacaatg gctgatgtca tcactgaact tagaaaatcg cagacattgc
      301 acctaggggt tgaagttgtt tctttacaag aaatcaagtc tgccacaaat tgtttcaata
      361 atcaaaatgt tattgcgaag ggatcgtctg gtacaattta caaaggagaa ctcactctta
      421 ctatgggact aaaagtgttt gctgtaaaaa ggtttgatga gattgattgt tttggagaaa
      481 atgcattctt aaaaaaggtt acaatgtttt ctctttgtgt gcatgataac atcatgccgc
      541 ttcgaggctt ttgtgaagaa gataatgaga aaatcattat tatggagcat gcgagtaatg
      601 gaagtcttga tgggcatata aacaaatcta gtctcacatg gggactaaga ctcaagatag
      661 ctattagtgt tgcgaaaggg ctatctcata ttcattcttt ggataatatt caaagcacat
      721 accacggtga cattataaaa actagcaaga ttctacttga tggtgactgg aaagcatcaa
      781 tcttatattt tgttacatct aaaggtcatg acaggctagg ctatcttgat ccgttacttt
      841 tgtcagatgg tgcaacaaca acaggatcag atttttatgc atttggagtc gttttatttc
      901 agatattatc tgggaagttg gcaatagaaa aggcagaaaa gtatccacaa gataaacttc
      961 gaaaaattat aagccgtgaa caaaaaagtg atgcagaata tgaatacgaa gatgaatatg
     1021 aagatgagta cgaagttttc cttggttggt tggcagtacg ctgctacgaa gaccgcatac
     1081 tagaagagat cacctttcac gatcttaaaa cccaaacaga atcgataagt atattttcag
     1141 aagttgccta cctgtgcttg aaaaaagatc gtccgaatat ggcttgggtg atatctaaac
     1201 ttgaggaagc tctcaacatc cattgggttt cattaaacaa ggatggaaag acgaatgaat
     1261 tgatatccgc tacagagttt gaatacaaaa atcttaggat tctcaagtgg agatctgaaa
     1321 aatcatcaag gttctcaaag gttgcaaaga tttcagagac gtcagatctc aacatcaaaa
     1381 ttcagataaa aactaagttt ttatctgaag gggtcattta tggggcttac ttagtgttca
     1441 aattttgtga ttcacgaatg gtttcaagtg acacatatgt gaacctaaaa tataaaacat
     1501 caacgggatc ctataattca tatattgcaa agggaagaga tgatgcgtgg aagatgattg
     1561 aattatgtaa atttgaggat catagtcaaa ttattgattt tgaggttcag ctaaagagat
     1621 ttcatggcca ttcttgtgga agcggtccca tttttataga aggcatcgag tttcaaccca
     1681 tcgatgataa ttgataacag acttcgtcaa ttgtaaaatc tttcaatttc catcctttaa
     1741 caacatccag ggtgcaatat gcacataatt tcgtggggtg aatcaagtaa tgtgtaactg
     1801 ttcgaatgag atcatacctg gatagttgcg agctaagaac aagcttgagg tcaaggttaa
     1861 agtgaaagaa gctcaaaata atagaagact aaggattagt ttgtcgattt ctttatttgt
     1921 aattttgttg tttattataa ttttttccct aaaataatct gtgttcaaaa ttggaatgaa
     1981 gtagctgtat tggaggtaac aagtaatatg gaagtttttg taatattgtc aaaaatagaa
     2041 tacgatatgt ttcatgtttt gcaatatgta gcatttgaca gtgtgtgtac atgaatggca
     2101 aaaatgcagt tgctatacag cagtttgtaa tatgcagaaa agttttgcaa actgcacaaa
     2161 agtt
//
LOCUS       XM_071830519            2164 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL10 (LOC139840264), transcript
            variant X5, mRNA.
ACCESSION   XM_071830519
VERSION     XM_071830519.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2164
                     /gene="LOC139840264"
                     /note="probable serine/threonine-protein kinase PBL10;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840264"
     CDS             230..1690
                     /gene="LOC139840264"
                     /codon_start=1
                     /product="leucine-rich repeat receptor protein kinase
                     HPCA1-like isoform X5"
                     /protein_id="XP_071686620.1"
                     /db_xref="GeneID:139840264"
                     /translation="MGLKVFAVKRFDEIDCFGENAFLKKVTMFSLCVHDNIMPLRGFC
                     EEDNEKIIIMEHASNGSLDGHINKSSLTWGLRLKIAISVAKGLSHIHSLDNIQSTYHG
                     DIIKTSKILLDGDWKASILYFVTSKGHDRLGYLDPLLLSDGATTTGSDFYAFGVVLFQ
                     ILSGKLAIEKAEKYPQDKLRKIISREQKSDAEYEYEDEYEDEYEVFLGWLAVRCYEDR
                     ILEEITFHDLKTQTESISIFSEVAYLCLKKDRPNMAWVISKLEEALNIHNEWECEQKL
                     RDYEDILKMSKYMPSNKITKKELYARLCLGMSIDNGKMWVSLNKDGKTNELISATEFE
                     YKNLRILKWRSEKSSRVTQITIENRMITGTCRFSKVAKISETSDLNIKIQIKTKFLSE
                     GVIYGAYLVFKFCDSRMVSSDTYVNLKYKTSTGSYNSYIAKGRDDAWKMIELCKFEDH
                     SQIIDFEVQLKRFHGHSCGSGPIFIEGIEFQPIDDN"
     misc_feature    239..1015
                     /gene="LOC139840264"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1325..1675
                     /gene="LOC139840264"
                     /note="Phloem protein 2; Region: PP2; pfam14299"
                     /db_xref="CDD:464128"
ORIGIN      
        1 ccataaacat atttgcagct ttaacacatg tttgcttaca ttgcactaca accaatcacc
       61 gcctcacaat ggctgatgtc atcactgaac ttagaaaatc gcagacattg cacgggttga
      121 agttgtttct ttacaagaaa tcaagtctgc cacaaattgt ttcaataatc aaaatgttat
      181 tgcgaaggga tcgtctggta caatttacaa aggagaactc actcttacta tgggactaaa
      241 agtgtttgct gtaaaaaggt ttgatgagat tgattgtttt ggagaaaatg cattcttaaa
      301 aaaggttaca atgttttctc tttgtgtgca tgataacatc atgccgcttc gaggcttttg
      361 tgaagaagat aatgagaaaa tcattattat ggagcatgcg agtaatggaa gtcttgatgg
      421 gcatataaac aaatctagtc tcacatgggg actaagactc aagatagcta ttagtgttgc
      481 gaaagggcta tctcatattc attctttgga taatattcaa agcacatacc acggtgacat
      541 tataaaaact agcaagattc tacttgatgg tgactggaaa gcatcaatct tatattttgt
      601 tacatctaaa ggtcatgaca ggctaggcta tcttgatccg ttacttttgt cagatggtgc
      661 aacaacaaca ggatcagatt tttatgcatt tggagtcgtt ttatttcaga tattatctgg
      721 gaagttggca atagaaaagg cagaaaagta tccacaagat aaacttcgaa aaattataag
      781 ccgtgaacaa aaaagtgatg cagaatatga atacgaagat gaatatgaag atgagtacga
      841 agttttcctt ggttggttgg cagtacgctg ctacgaagac cgcatactag aagagatcac
      901 ctttcacgat cttaaaaccc aaacagaatc gataagtata ttttcagaag ttgcctacct
      961 gtgcttgaaa aaagatcgtc cgaatatggc ttgggtgata tctaaacttg aggaagctct
     1021 caacatccat aatgagtggg aatgtgagca aaaattgcgt gattatgagg atatattgaa
     1081 gatgtccaaa tatatgccat ccaataaaat caccaaaaag gaactttatg ctcgtctttg
     1141 tttaggaatg tccattgaca atggaaaaat gtgggtttca ttaaacaagg atggaaagac
     1201 gaatgaattg atatccgcta cagagtttga atacaaaaat cttaggattc tcaagtggag
     1261 atctgaaaaa tcatcaaggg tcactcaaat tactattgag aatagaatga taactggtac
     1321 ttgcaggttc tcaaaggttg caaagatttc agagacgtca gatctcaaca tcaaaattca
     1381 gataaaaact aagtttttat ctgaaggggt catttatggg gcttacttag tgttcaaatt
     1441 ttgtgattca cgaatggttt caagtgacac atatgtgaac ctaaaatata aaacatcaac
     1501 gggatcctat aattcatata ttgcaaaggg aagagatgat gcgtggaaga tgattgaatt
     1561 atgtaaattt gaggatcata gtcaaattat tgattttgag gttcagctaa agagatttca
     1621 tggccattct tgtggaagcg gtcccatttt tatagaaggc atcgagtttc aacccatcga
     1681 tgataattga taacagactt cgtcaattgt aaaatctttc aatttccatc ctttaacaac
     1741 atccagggtg caatatgcac ataatttcgt ggggtgaatc aagtaatgtg taactgttcg
     1801 aatgagatca tacctggata gttgcgagct aagaacaagc ttgaggtcaa ggttaaagtg
     1861 aaagaagctc aaaataatag aagactaagg attagtttgt cgatttcttt atttgtaatt
     1921 ttgttgttta ttataatttt ttccctaaaa taatctgtgt tcaaaattgg aatgaagtag
     1981 ctgtattgga ggtaacaagt aatatggaag tttttgtaat attgtcaaaa atagaatacg
     2041 atatgtttca tgttttgcaa tatgtagcat ttgacagtgt gtgtacatga atggcaaaaa
     2101 tgcagttgct atacagcagt ttgtaatatg cagaaaagtt ttgcaaactg cacaaaagtt
     2161 tatt
//
LOCUS       XM_071830520            1892 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL10 (LOC139840264), transcript
            variant X6, mRNA.
ACCESSION   XM_071830520
VERSION     XM_071830520.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1892
                     /gene="LOC139840264"
                     /note="probable serine/threonine-protein kinase PBL10;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840264"
     CDS             81..1502
                     /gene="LOC139840264"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL10
                     isoform X6"
                     /protein_id="XP_071686621.1"
                     /db_xref="GeneID:139840264"
                     /translation="MANQYFPDNKPYQIIASYLQKEFQKSSLSSFQRTMDSINIFAAL
                     THVCLHCTTTNHRLTMADVITELRKSQTLHLGVEVVSLQEIKSATNCFNNQNVIAKGS
                     SGTIYKGELTLTMGLKVFAVKRFDEIDCFGENAFLKKVTMFSLCVHDNIMPLRGFCEE
                     DNEKIIIMEHASNGSLDGHINKSSLTWGLRLKIAISVAKGLSHIHSLDNIQSTYHGDI
                     IKTSKILLDGDWKASILYFVTSKGHDRLGYLDPLLLSDGATTTGSDFYAFGVVLFQIL
                     SGKLAIEKAEKYPQDKLRKIISREQKSDAEYEYEDEYEDEYEVFLGWLAVRCYEDRIL
                     EEITFHDLKTQTESISIFSEVAYLCLKKDRPNMAWVISKLEEALNIHNEWECEQKLRD
                     YEDILKMSKYMPSNKITKKELYARLCLGMSIDNGKMWVSLNKDGKTNELISATEFEYK
                     NLRILKWRSEKSSRVQYAHNFVG"
     misc_feature    372..1208
                     /gene="LOC139840264"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(372..383,390..392,396..398,441..443,447..449,
                     534..536,582..593,729..731,744..749,753..755,783..788)
                     /gene="LOC139840264"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 actctcttgg cgtggttttg ttggaagtgt tttgtgggag gtttgtaatc actcgaaatg
       61 aaaaatataa tctagttaac atggccaatc aatatttccc agacaataaa ccataccaga
      121 tcattgcttc gtatctacag aaagagtttc agaaaagttc cttgtcatca ttccagagaa
      181 ccatggattc cataaacata tttgcagctt taacacatgt ttgcttacat tgcactacaa
      241 ccaatcaccg cctcacaatg gctgatgtca tcactgaact tagaaaatcg cagacattgc
      301 acctaggggt tgaagttgtt tctttacaag aaatcaagtc tgccacaaat tgtttcaata
      361 atcaaaatgt tattgcgaag ggatcgtctg gtacaattta caaaggagaa ctcactctta
      421 ctatgggact aaaagtgttt gctgtaaaaa ggtttgatga gattgattgt tttggagaaa
      481 atgcattctt aaaaaaggtt acaatgtttt ctctttgtgt gcatgataac atcatgccgc
      541 ttcgaggctt ttgtgaagaa gataatgaga aaatcattat tatggagcat gcgagtaatg
      601 gaagtcttga tgggcatata aacaaatcta gtctcacatg gggactaaga ctcaagatag
      661 ctattagtgt tgcgaaaggg ctatctcata ttcattcttt ggataatatt caaagcacat
      721 accacggtga cattataaaa actagcaaga ttctacttga tggtgactgg aaagcatcaa
      781 tcttatattt tgttacatct aaaggtcatg acaggctagg ctatcttgat ccgttacttt
      841 tgtcagatgg tgcaacaaca acaggatcag atttttatgc atttggagtc gttttatttc
      901 agatattatc tgggaagttg gcaatagaaa aggcagaaaa gtatccacaa gataaacttc
      961 gaaaaattat aagccgtgaa caaaaaagtg atgcagaata tgaatacgaa gatgaatatg
     1021 aagatgagta cgaagttttc cttggttggt tggcagtacg ctgctacgaa gaccgcatac
     1081 tagaagagat cacctttcac gatcttaaaa cccaaacaga atcgataagt atattttcag
     1141 aagttgccta cctgtgcttg aaaaaagatc gtccgaatat ggcttgggtg atatctaaac
     1201 ttgaggaagc tctcaacatc cataatgagt gggaatgtga gcaaaaattg cgtgattatg
     1261 aggatatatt gaagatgtcc aaatatatgc catccaataa aatcaccaaa aaggaacttt
     1321 atgctcgtct ttgtttagga atgtccattg acaatggaaa aatgtgggtt tcattaaaca
     1381 aggatggaaa gacgaatgaa ttgatatccg ctacagagtt tgaatacaaa aatcttagga
     1441 ttctcaagtg gagatctgaa aaatcatcaa gggtgcaata tgcacataat ttcgtggggt
     1501 gaatcaagta atgtgtaact gttcgaatga gatcatacct ggatagttgc gagctaagaa
     1561 caagcttgag gtcaaggtta aagtgaaaga agctcaaaat aatagaagac taaggattag
     1621 tttgtcgatt tctttatttg taattttgtt gtttattata attttttccc taaaataatc
     1681 tgtgttcaaa attggaatga agtagctgta ttggaggtaa caagtaatat ggaagttttt
     1741 gtaatattgt caaaaataga atacgatatg tttcatgttt tgcaatatgt agcatttgac
     1801 agtgtgtgta catgaatggc aaaaatgcag ttgctataca gcagtttgta atatgcagaa
     1861 aagttttgca aactgcacaa aagtttatta ta
//
LOCUS       XM_071830521             793 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-binding allergen Ole
            e 8-like (LOC139840265), mRNA.
ACCESSION   XM_071830521
VERSION     XM_071830521.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..793
                     /gene="LOC139840265"
                     /note="calcium-binding allergen Ole e 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840265"
     CDS             141..617
                     /gene="LOC139840265"
                     /codon_start=1
                     /product="calcium-binding allergen Ole e 8-like"
                     /protein_id="XP_071686622.1"
                     /db_xref="GeneID:139840265"
                     /translation="MAAENSSNTKPSLYLTKSDQVKQVFNRFDVNGDGKISAVELVDV
                     MKALGSDTSIDEIKRIMEDIDTDRDGFINLEEFAGFCNGNTGEDDGGMKELQDAFELY
                     DLNKNGLISATELHQILSRLGEGCTVDDCVNMIKSVDADGDGFVNFDEFKKMMSNK"
     misc_feature    150..614
                     /gene="LOC139840265"
                     /note="centrin; Provisional; Region: PTZ00183"
                     /db_xref="CDD:185503"
     polyA_site      793
                     /gene="LOC139840265"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accaattgat gtggacatta acaactaaat agggcaagaa tccataactt cacacgcgtc
       61 ccttttattc cctcccaatt acaaacaatt tatccccaat tttcatttta acaaatttta
      121 gtttaccttc gattcaagca atggcagctg aaaacagtag taacacgaag ccatcactat
      181 acctaacaaa atcagatcaa gtcaaacaag tcttcaaccg tttcgacgtc aacggcgacg
      241 gcaagatctc cgccgtcgag ctcgtcgacg tcatgaaagc gctcggatct gacacgtcga
      301 tcgacgaaat taaacgaata atggaagata tcgatactga tcgtgacgga tttattaacc
      361 ttgaagaatt cgccggattt tgcaacggaa ataccggtga agatgacggc ggtatgaagg
      421 agctacagga tgcgtttgag ctgtatgatt tgaataaaaa cggattgatt tcagccacgg
      481 agttgcatca gatattgagt aggttagggg aaggatgtac ggttgatgat tgtgtgaata
      541 tgattaaatc ggttgatgct gatggtgatg gttttgttaa ttttgatgag tttaagaaga
      601 tgatgtctaa caagtgattt gaattgaata ttgttttttt cattttgaat aataatcgtg
      661 attctatgat atttgtaata tcagaaatat cagttacacg atggatatga aaccttttgt
      721 aatctcattg ttcaatttct aacttgatct caaaggatta aggttatcaa tgaattttgt
      781 ttcttgaaat tca
//
LOCUS       XR_011757302            1645 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840266), transcript variant X1, ncRNA.
ACCESSION   XR_011757302
VERSION     XR_011757302.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1645
                     /gene="LOC139840266"
                     /note="uncharacterized LOC139840266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840266"
     ncRNA           1..1645
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840266"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840266"
ORIGIN      
        1 ttcaactaaa aaatattaaa tctaaatgac taaatctcca ttttaattca ccgatgctct
       61 caatcaaaag ccaaatatac taactcttcc ccataacaag tctccaactc taaatctaca
      121 gatcaacagc tccatttatt tatatggtaa ttaaagtaca tacaaatctt ctctatctct
      181 tctctacatc ttacaaagcg tgtggggtat tgctgacgtg gcaatcaacc cattaaatca
      241 ggaactcaga tctgatgtgt aattagctga aataatctat attaataatc cttaattaca
      301 aaaatctgcc acatgtacca gtaaaatgac ggtttagaat aacttctatc ccctaattta
      361 tcccctgatg ttaaatctta tccccttcac gagcttttct catctaccta tcttttcata
      421 ccatcggtcg gtaatcgtaa atcagtatcg tcaacaattt aacgagaaat tcatagcgat
      481 tgaagtttaa gttcagatcg attaattttg agatgatcat cgatcgttcc tgttgccgaa
      541 cttaagtgca tcgtcgtcat ctacaatacg aagaaaccgt ttaagaattt cgacgatact
      601 tgggtaagtt gaagtggcac tcacaaagtt gcatcacgac tatctgtcta aggtttgtta
      661 aatttgtctt ttttaggatt tttttgttgt caatgacgtt tacttttcac tgaatcgctg
      721 aatttggaag ttcaatgtgt atctttgttt tcgtccatta ttttttctcc atacgtttgt
      781 ttgtaggtgc aagattttat gttgtgcctg cttcattcag tgtatttttg tttgaactgc
      841 ctttgtattt acttatttgt ccagtcgatt cattggcgat tcatgttcct tactttgcac
      901 ctcgctcata tatttttttt gtctttccta ctaagggagg ttgtcgctga aaaaatgctt
      961 cgttgccata aggtattaat atacaacttc ttaacaattg tttgttgtag atggttttta
     1021 tatcctttgt gattgttttg gctacttcac tagcgttcta tattcgttaa caactatatg
     1081 atcgtcggcg taaatcaata tcaatattgc tgtttttttt tttttttgtt attattgttt
     1141 ggtttactac aatgatagac gaaataggta acctgtagtt aacttattat gttatgatga
     1201 tgtaaagaga aaaacgtaat ttgcagttaa ctggattcat ggcctgccga acacattcac
     1261 agcagaaggc ttatagacag tgtggtgaag ggttatctaa gggagcttgc actgcttacc
     1321 tacgagcaat aatgattgaa ggacggaggc aattttgaag gtatgttagg taattattaa
     1381 tgactttagg ttgtaatatc ttattatagt ttgtgtaggt aagttgctac tgtttaaagc
     1441 caattaaaaa tgtataggtc gggctaaacg ttgaaacggg tcagtgtaaa accaaatgat
     1501 atgaagttgt acccctttaa tgtttagttt gaaagagtcc ttgtgatgaa gacctataaa
     1561 cttattaaat gcttgatttt tctacaattt aaggtgtttg atttatcgta tttgactatt
     1621 tgatttcgat agatgtaatg tttgt
//
LOCUS       XR_011757303            2214 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840266), transcript variant X2, ncRNA.
ACCESSION   XR_011757303
VERSION     XR_011757303.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2214
                     /gene="LOC139840266"
                     /note="uncharacterized LOC139840266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840266"
     ncRNA           1..2214
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840266"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840266"
ORIGIN      
        1 ttcaactaaa aaatattaaa tctaaatgac taaatctcca ttttaattca ccgatgctct
       61 caatcaaaag ccaaatatac taactcttcc ccataacaag tctccaactc taaatctaca
      121 gatcaacagc tccatttatt tatatggtaa ttaaagtaca tacaaatctt ctctatctct
      181 tctctacatc ttacaaagcg tgtggggtat tgctgacgtg gcaatcaacc cattaaatca
      241 ggaactcaga tctgatgtgt aattagctga aataatctat attaataatc cttaattaca
      301 aaaatctgcc acatgtacca gtaaaatgac ggtttagaat aacttctatc ccctaattta
      361 tcccctgatg ttaaatctta tccccttcac gagcttttct catctaccta tcttttcata
      421 ccatcggtcg gtaatcgtaa atcagtatcg tcaacaattt aacgagaaat tcatagcgat
      481 tgaagtttaa gttcagatcg attaattttg agatgatcat cgatcgttcc tgttgccgaa
      541 cttaagtgca tcgtcgtcat ctacaatacg aagaaaccgt ttaagaattt cgacgatact
      601 tgggtaagtt gaagtggcac tcacaaagtt gcatcacgac tatctgtcta aggtttgtta
      661 aatttgtctt ttttaggatt tttttgttgt caatgacgtt tacttttcac tgaatcgctg
      721 aatttggaag ttcaatgtgt atctttgttt tcgtccatta ttttttctcc atacgtttgt
      781 ttgtaggtgc aagattttat gttgtgcctg cttcattcag tgtatttttg tttgaactgc
      841 ctttgtattt acttatttgt ccagtcgatt cattggcgat tcatgttcct tactttgcac
      901 ctcgctcata tatttttttt gtctttccta ctaagggagg ttgtcgctga aaaaatgctt
      961 cgttgccata aggtattaat atacaacttc ttaacaattg tttgttgtag atggttttta
     1021 tatcctttgt gattgttttg gctacttcac tagcgttcta tattcgttaa caactatatg
     1081 atcgtcggcg taaatcaata tcaatattgc tgtttttttt tttttttgtt attattgttt
     1141 ggtttactac aatgatagac gaaataggta acctgtagtt aacttattat gttatgatga
     1201 tgtaaagaga aaaacgtaat ttgcagttaa ctggattcat ggcctgccga acacattcac
     1261 agcagaaggc ttatagacag tggtaagtca gcagatttgt tactttcaca gtttcatatc
     1321 atatagaaat aatagttact ttattagaga tattactaca ttcattaatt actttcgtac
     1381 atattgtaca tgtacataaa ttgaataggt tatccaaatc aatatcaata taaaatttgc
     1441 ttaatcaaat tctgatgaaa tgaactatcc aatgtataac tttgcagccc cagtttacga
     1501 ttttcattca cccacagcac caccacggta ccatgtacca tctcctcccc acctgtatac
     1561 aaattctacg ccaacatcta agatgttttg acattgacca ttaaccattt ggacaccaag
     1621 ttgcagtaac gggtcatgtg tctcacttta tattatatct ttatttattg taattattgt
     1681 gttagagcaa tcaatacatt attattaatt aattgtaggc tcagtacaaa ttgaccgaca
     1741 ataattaatt ttacgtaaaa ttgcaagata tcattggcta aggagtttgc atactattgg
     1801 caacagtttg cagtttcctg acaactgatt tccctttttc gtaagtataa gtggtgaagg
     1861 gttatctaag ggagcttgca ctgcttacct acgagcaata atgattgaag gacggaggca
     1921 attttgaagg tatgttaggt aattattaat gactttaggt tgtaatatct tattatagtt
     1981 tgtgtaggta agttgctact gtttaaagcc aattaaaaat gtataggtcg ggctaaacgt
     2041 tgaaacgggt cagtgtaaaa ccaaatgata tgaagttgta cccctttaat gtttagtttg
     2101 aaagagtcct tgtgatgaag acctataaac ttattaaatg cttgattttt ctacaattta
     2161 aggtgtttga tttatcgtat ttgactattt gatttcgata gatgtaatgt ttgt
//
LOCUS       XR_011757304            1391 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840266), transcript variant X3, ncRNA.
ACCESSION   XR_011757304
VERSION     XR_011757304.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1391
                     /gene="LOC139840266"
                     /note="uncharacterized LOC139840266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840266"
     ncRNA           1..1391
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840266"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840266"
ORIGIN      
        1 ttcaactaaa aaatattaaa tctaaatgac taaatctcca ttttaattca ccgatgctct
       61 caatcaaaag ccaaatatac taactcttcc ccataacaag tctccaactc taaatctaca
      121 gatcaacagc tccatttatt tatatggtaa ttaaagtaca tacaaatctt ctctatctct
      181 tctctacatc ttacaaagcg tgtggggtat tgctgacgtg gcaatcaacc cattaaatca
      241 ggaactcaga tctgatgtgt aattagctga aataatctat attaataatc cttaattaca
      301 aaaatctgcc acatgtacca gtaaaatgac ggtttagaat aacttctatc ccctaattta
      361 tcccctgatg ttaaatctta tccccttcac gagcttttct catctaccta tcttttcata
      421 ccatcggtcg gtaatcgtaa atcagtatcg tcaacaattt aacgagaaat tcatagcgat
      481 tgaagtttaa gttcagatcg attaattttg agatgatcat cgatcgttcc tgttgccgaa
      541 cttaagtgca tcgtcgtcat ctacaatacg aagaaaccgt ttaagaattt cgacgatact
      601 tgggtaagtt gaagtggcac tcacaaagtt gcatcacgac tatctgtcta aggtttgtta
      661 aatttgtctt ttttaggatt tttttgttgt caatgacgtt tacttttcac tgaatcgctg
      721 aatttggaag ttcaatgtgt atctttgttt tcgtccatta ttttttctcc atacgtttgt
      781 ttgtaggtgc aagattttat gttgtgcctg cttcattcag tgtatttttg tttgaactgc
      841 ctttgtattt acttatttgt ccagtcgatt cattggcgat tcatgttcct tactttgcac
      901 ctcgctcata tatttttttt gtctttccta ctaagggagg ttgtcgctga aaaaatgctt
      961 cgttgccata agttaactgg attcatggcc tgccgaacac attcacagca gaaggcttat
     1021 agacagtgtg gtgaagggtt atctaaggga gcttgcactg cttacctacg agcaataatg
     1081 attgaaggac ggaggcaatt ttgaaggtat gttaggtaat tattaatgac tttaggttgt
     1141 aatatcttat tatagtttgt gtaggtaagt tgctactgtt taaagccaat taaaaatgta
     1201 taggtcgggc taaacgttga aacgggtcag tgtaaaacca aatgatatga agttgtaccc
     1261 ctttaatgtt tagtttgaaa gagtccttgt gatgaagacc tataaactta ttaaatgctt
     1321 gatttttcta caatttaagg tgtttgattt atcgtatttg actatttgat ttcgatagat
     1381 gtaatgtttg t
//
LOCUS       XR_011757305            2203 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840266), transcript variant X4, ncRNA.
ACCESSION   XR_011757305
VERSION     XR_011757305.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2203
                     /gene="LOC139840266"
                     /note="uncharacterized LOC139840266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840266"
     ncRNA           1..2203
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840266"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840266"
ORIGIN      
        1 ttcaactaaa aaatattaaa tctaaatgac taaatctcca ttttaattca ccgatgctct
       61 caatcaaaag ccaaatatac taactcttcc ccataacaag tctccaactc taaatctaca
      121 gatcaacagc tccatttatt tatatggtaa ttaaagtaca tacaaatctt ctctatctct
      181 tctctacatc ttacaaagcg tgtggggtat tgctgacgtg gcaatcaacc cattaaatca
      241 ggaactcaga tctgatgtgt aattagctga aataatctat attaataatc cttaattaca
      301 aaaatctgcc acatgtacca gtaaaatgac ggtttagaat aacttctatc ccctaattta
      361 tcccctgatg ttaaatctta tccccttcac gagcttttct catctaccta tcttttcata
      421 ccatcggtcg gtaatcgtaa atcagtatcg tcaacaattt aacgagaaat tcatagcgat
      481 tgaagtttaa gttcagatcg attaattttg agatgatcat cgatcgttcc tgttgccgaa
      541 cttaagtgca tcgtcgtcat ctacaatacg aagaaaccgt ttaagaattt cgacgatact
      601 tgggtaagtt gaagtggcac tcacaaagtt gcatcacgac tatctgtcta aggtttgtta
      661 aatttgtctt ttttaggatt tttttgttgt caatgacgtt tacttttcac tgaatcgctg
      721 aatttggaag ttcaatgtgt atctttgttt tcgtccatta ttttttctcc atacgtttgt
      781 ttgtaggtgc aagattttat gttgtgcctg cttcattcag tgtatttttg tttgaactgc
      841 ctttgtattt acttatttgt ccagtcgatt cattggcgat tcatgttcct tactttgcac
      901 ctcgctcata tatttttttt gtctttccta ctaagggagg ttgtcgctga aaaaatgctt
      961 cgttgccata aggtattaat atacaacttc ttaacaattg tttgttgtag atggttttta
     1021 tatcctttgt gattgttttg gctacttcac tagcgttcta tattcgttaa caactatatg
     1081 atcgtcggcg taaatcaata tcaatattgc tgtttttttt tttttttgtt attattgttt
     1141 ggtttactac aatgatagac gaaataggta acctgtagtt aacttattat gttatgatga
     1201 tgtaaagaga aaaacgtaat ttgcagttaa ctggattcat ggcctgccga acacattcac
     1261 agcagaaggc ttatagacag tggtaagtca gcagatttgt tactttcaca gtttcatatc
     1321 atatagaaat aatagttact ttattagaga tattactaca ttcattaatt actttcgtac
     1381 atattgtaca tgtacataaa ttgaataggt tatccaaatc aatatcaata taaaatttgc
     1441 ttaatcaaat tctgatgaaa tgaactatcc aatgtataac tttgcagccc cagtttacga
     1501 ttttcattca cccacagcac caccacggta ccatgtacca tctcctcccc acctgtatac
     1561 aaattctacg ccaacatcta agatgttttg acattgacca ttaaccattt ggacaccaag
     1621 ttgcagtaac gggtcatgtg tctcacttta tattatatct ttatttattg taattattgt
     1681 gttagagcaa tcaatacatt attattaatt aattgtaggc tcagtacaaa ttgaccgaca
     1741 ataattaatt ttacgtaaaa ttgcaagata tcattggcta aggagtttgc atactattgg
     1801 caacagtttg cagtttcctg acaactgatt tccctttttc tggtgaaggg ttatctaagg
     1861 gagcttgcac tgcttaccta cgagcaataa tgattgaagg acggaggcaa ttttgaaggt
     1921 atgttaggta attattaatg actttaggtt gtaatatctt attatagttt gtgtaggtaa
     1981 gttgctactg tttaaagcca attaaaaatg tataggtcgg gctaaacgtt gaaacgggtc
     2041 agtgtaaaac caaatgatat gaagttgtac ccctttaatg tttagtttga aagagtcctt
     2101 gtgatgaaga cctataaact tattaaatgc ttgatttttc tacaatttaa ggtgtttgat
     2161 ttatcgtatt tgactatttg atttcgatag atgtaatgtt tgt
//
LOCUS       XR_011757306            1960 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840266), transcript variant X5, ncRNA.
ACCESSION   XR_011757306
VERSION     XR_011757306.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1960
                     /gene="LOC139840266"
                     /note="uncharacterized LOC139840266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840266"
     ncRNA           1..1960
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840266"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840266"
ORIGIN      
        1 ttcaactaaa aaatattaaa tctaaatgac taaatctcca ttttaattca ccgatgctct
       61 caatcaaaag ccaaatatac taactcttcc ccataacaag tctccaactc taaatctaca
      121 gatcaacagc tccatttatt tatatggtaa ttaaagtaca tacaaatctt ctctatctct
      181 tctctacatc ttacaaagcg tgtggggtat tgctgacgtg gcaatcaacc cattaaatca
      241 ggaactcaga tctgatgtgt aattagctga aataatctat attaataatc cttaattaca
      301 aaaatctgcc acatgtacca gtaaaatgac ggtttagaat aacttctatc ccctaattta
      361 tcccctgatg ttaaatctta tccccttcac gagcttttct catctaccta tcttttcata
      421 ccatcggtcg gtaatcgtaa atcagtatcg tcaacaattt aacgagaaat tcatagcgat
      481 tgaagtttaa gttcagatcg attaattttg agatgatcat cgatcgttcc tgttgccgaa
      541 cttaagtgca tcgtcgtcat ctacaatacg aagaaaccgt ttaagaattt cgacgatact
      601 tgggtaagtt gaagtggcac tcacaaagtt gcatcacgac tatctgtcta aggtttgtta
      661 aatttgtctt ttttaggatt tttttgttgt caatgacgtt tacttttcac tgaatcgctg
      721 aatttggaag ttcaatgtgt atctttgttt tcgtccatta ttttttctcc atacgtttgt
      781 ttgtaggtgc aagattttat gttgtgcctg cttcattcag tgtatttttg tttgaactgc
      841 ctttgtattt acttatttgt ccagtcgatt cattggcgat tcatgttcct tactttgcac
      901 ctcgctcata tatttttttt gtctttccta ctaagggagg ttgtcgctga aaaaatgctt
      961 cgttgccata agttaactgg attcatggcc tgccgaacac attcacagca gaaggcttat
     1021 agacagtggt aagtcagcag atttgttact ttcacagttt catatcatat agaaataata
     1081 gttactttat tagagatatt actacattca ttaattactt tcgtacatat tgtacatgta
     1141 cataaattga ataggttatc caaatcaata tcaatataaa atttgcttaa tcaaattctg
     1201 atgaaatgaa ctatccaatg tataactttg cagccccagt ttacgatttt cattcaccca
     1261 cagcaccacc acggtaccat gtaccatctc ctccccacct gtatacaaat tctacgccaa
     1321 catctaagat gttttgacat tgaccattaa ccatttggac accaagttgc agtaacgggt
     1381 catgtgtctc actttatatt atatctttat ttattgtaat tattgtgtta gagcaatcaa
     1441 tacattatta ttaattaatt gtaggctcag tacaaattga ccgacaataa ttaattttac
     1501 gtaaaattgc aagatatcat tggctaagga gtttgcatac tattggcaac agtttgcagt
     1561 ttcctgacaa ctgatttccc tttttcgtaa gtataagtgg tgaagggtta tctaagggag
     1621 cttgcactgc ttacctacga gcaataatga ttgaaggacg gaggcaattt tgaaggtatg
     1681 ttaggtaatt attaatgact ttaggttgta atatcttatt atagtttgtg taggtaagtt
     1741 gctactgttt aaagccaatt aaaaatgtat aggtcgggct aaacgttgaa acgggtcagt
     1801 gtaaaaccaa atgatatgaa gttgtacccc tttaatgttt agtttgaaag agtccttgtg
     1861 atgaagacct ataaacttat taaatgcttg atttttctac aatttaaggt gtttgattta
     1921 tcgtatttga ctatttgatt tcgatagatg taatgtttgt
//
LOCUS       XR_011757307            1464 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840266), transcript variant X6, ncRNA.
ACCESSION   XR_011757307
VERSION     XR_011757307.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1464
                     /gene="LOC139840266"
                     /note="uncharacterized LOC139840266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840266"
     ncRNA           1..1464
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840266"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139840266"
ORIGIN      
        1 ttcaactaaa aaatattaaa tctaaatgac taaatctcca ttttaattca ccgatgctct
       61 caatcaaaag ccaaatatac taactcttcc ccataacaag tctccaactc taaatctaca
      121 gatcaacagc tccatttatt tatatggtaa ttaaagtaca tacaaatctt ctctatctct
      181 tctctacatc ttacaaagcg tgtggggtat tgctgacgtg gcaatcaacc cattaaatca
      241 ggaactcaga tctgatgtgt aattagctga aataatctat attaataatc cttaattaca
      301 aaaatctgcc acatgtacca gtaaaatgac ggtttagaat aacttctatc ccctaattta
      361 tcccctgatg ttaaatctta tccccttcac gagcttttct catctaccta tcttttcata
      421 ccatcggtcg gtaatcgtaa atcagtatcg tcaacaattt aacgagaaat tcatagcgat
      481 tgaagtttaa gttcagatcg attaattttg agatgatcat cgatcgttcc tgttgccgaa
      541 cttaagtgca tcgtcgtcat ctacaatacg aagaaaccgt ttaagaattt cgacgatact
      601 tgggtaagtt gaagtggcac tcacaaagtt gcatcacgac tatctgtcta aggtttgtta
      661 aatttgtctt ttttaggatt tttttgttgt caatgacgtt tacttttcac tgaatcgctg
      721 aatttggaag ttcaatgtgt atctttgttt tcgtccatta ttttttctcc atacgtttgt
      781 ttgtaggtgc aagattttat gttgtgcctg cttcattcag tgtatttttg tttgaactgc
      841 ctttgtattt acttatttgt ccagtcgatt cattggcgat tcatgttcct tactttgcac
      901 ctcgctcata tatttttttt gtctttccta ctaagggagg ttgtcgctga aaaaatgctt
      961 cgttgccata agttaactgg attcatggcc tgccgaacac attcacagca gaaggcttat
     1021 agacagtgat atcattggct aaggagtttg catactattg gcaacagttt gcagtttcct
     1081 gacaactgat ttcccttttt ctggtgaagg gttatctaag ggagcttgca ctgcttacct
     1141 acgagcaata atgattgaag gacggaggca attttgaagg tatgttaggt aattattaat
     1201 gactttaggt tgtaatatct tattatagtt tgtgtaggta agttgctact gtttaaagcc
     1261 aattaaaaat gtataggtcg ggctaaacgt tgaaacgggt cagtgtaaaa ccaaatgata
     1321 tgaagttgta cccctttaat gtttagtttg aaagagtcct tgtgatgaag acctataaac
     1381 ttattaaatg cttgattttt ctacaattta aggtgtttga tttatcgtat ttgactattt
     1441 gatttcgata gatgtaatgt ttgt
//
LOCUS       XR_011757308            1475 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840266), transcript variant X7, ncRNA.
ACCESSION   XR_011757308
VERSION     XR_011757308.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1475
                     /gene="LOC139840266"
                     /note="uncharacterized LOC139840266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840266"
     ncRNA           1..1475
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840266"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139840266"
ORIGIN      
        1 ttcaactaaa aaatattaaa tctaaatgac taaatctcca ttttaattca ccgatgctct
       61 caatcaaaag ccaaatatac taactcttcc ccataacaag tctccaactc taaatctaca
      121 gatcaacagc tccatttatt tatatggtaa ttaaagtaca tacaaatctt ctctatctct
      181 tctctacatc ttacaaagcg tgtggggtat tgctgacgtg gcaatcaacc cattaaatca
      241 ggaactcaga tctgatgtgt aattagctga aataatctat attaataatc cttaattaca
      301 aaaatctgcc acatgtacca gtaaaatgac ggtttagaat aacttctatc ccctaattta
      361 tcccctgatg ttaaatctta tccccttcac gagcttttct catctaccta tcttttcata
      421 ccatcggtcg gtaatcgtaa atcagtatcg tcaacaattt aacgagaaat tcatagcgat
      481 tgaagtttaa gttcagatcg attaattttg agatgatcat cgatcgttcc tgttgccgaa
      541 cttaagtgca tcgtcgtcat ctacaatacg aagaaaccgt ttaagaattt cgacgatact
      601 tgggtaagtt gaagtggcac tcacaaagtt gcatcacgac tatctgtcta aggtttgtta
      661 aatttgtctt ttttaggatt tttttgttgt caatgacgtt tacttttcac tgaatcgctg
      721 aatttggaag ttcaatgtgt atctttgttt tcgtccatta ttttttctcc atacgtttgt
      781 ttgtaggtgc aagattttat gttgtgcctg cttcattcag tgtatttttg tttgaactgc
      841 ctttgtattt acttatttgt ccagtcgatt cattggcgat tcatgttcct tactttgcac
      901 ctcgctcata tatttttttt gtctttccta ctaagggagg ttgtcgctga aaaaatgctt
      961 cgttgccata agttaactgg attcatggcc tgccgaacac attcacagca gaaggcttat
     1021 agacagtgat atcattggct aaggagtttg catactattg gcaacagttt gcagtttcct
     1081 gacaactgat ttcccttttt cgtaagtata agtggtgaag ggttatctaa gggagcttgc
     1141 actgcttacc tacgagcaat aatgattgaa ggacggaggc aattttgaag gtatgttagg
     1201 taattattaa tgactttagg ttgtaatatc ttattatagt ttgtgtaggt aagttgctac
     1261 tgtttaaagc caattaaaaa tgtataggtc gggctaaacg ttgaaacggg tcagtgtaaa
     1321 accaaatgat atgaagttgt acccctttaa tgtttagttt gaaagagtcc ttgtgatgaa
     1381 gacctataaa cttattaaat gcttgatttt tctacaattt aaggtgtttg atttatcgta
     1441 tttgactatt tgatttcgat agatgtaatg tttgt
//
LOCUS       XM_071830522            2851 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840267), transcript variant X1, mRNA.
ACCESSION   XM_071830522
VERSION     XM_071830522.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2851
                     /gene="LOC139840267"
                     /note="uncharacterized LOC139840267; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840267"
     CDS             464..1537
                     /gene="LOC139840267"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686623.1"
                     /db_xref="GeneID:139840267"
                     /translation="MRPLRKRKKDNGKAHALDDYVPLSSQWPVGSVVSSGQVVKRAAL
                     CRCNNNSSTSAPLDPNYVAYVNAAVNSRPAVQLPVMFVQRGVAPLYTLFASFYCSALS
                     PLYRDSVGCDCICTQCGALFWHAERIKSSFKDKKIHYHRCCENGHVSLPHYEDPPVLL
                     KQLLETAVFQNNIRAYNQMFSMTSFGARIDDIINDVRGPYVFKISGQIYHWIGSLCPQ
                     QGTPPRFLQLYIYDTEHEVENRMAHFGGLDSGSLCQDVVSRLISLLDTHNELVKLFRT
                     ARDKCTGVEVPTFNVHLFSLTGSQQHALPTSDAVGDIVFDSGPEAISDYDVIIEPRSD
                     RLRRINKVHPSYISLQFPLMFFL"
ORIGIN      
        1 tttacactta tctatcgtct ctcgggtttt aatcatccct gttcttaatt cttttttttt
       61 cgcgccacaa caatcacctt tcttgctctc tttcaatttc ttcttcccta cagtttttac
      121 aggtacttca aattgctcta ttcatatgct ttctaatgca atttgtttgc tgtatataca
      181 gaatcccgta cttaatttac tggtacatag attaggtttt ttttttattt ttttttattt
      241 tggtatgatg ttctattgtt ttcatgtagc tttcgtatat cccgctttat ctgcaactca
      301 ggtacgattt tttactgttt tccattgatg ttattcagta tctttaatgg ctgtttgttg
      361 ccctctctta tggatgctat gggctgcctt ttattgatcg attatttcat ccttttaaag
      421 ctgtattttt ttgtcttcgt aaattatttt gctgattttc ataatgagac ccttgagaaa
      481 aagaaagaaa gataacggta aggcacatgc gcttgatgat tatgttcctt tgtcaagtca
      541 atggcctgta gggtctgttg tttcctccgg gcaggttgtt aaacgagccg ccttgtgtcg
      601 ttgtaacaat aattcgtcga cctcggctcc tctggatcct aattatgttg cttatgttaa
      661 tgctgctgtt aattctaggc ctgctgtaca attgcctgtc atgtttgtac aacggggagt
      721 tgcgccacta tacactttgt tcgcgtcgtt ctattgctca gctctttcac cgttgtatcg
      781 tgattctgtc gggtgtgact gcatttgcac gcaatgtggt gctctcttct ggcatgctga
      841 acgtatcaag tctagcttta aagacaagaa aatacattat catcgctgct gtgaaaacgg
      901 gcatgtttcg ttaccgcatt atgaggaccc tcctgtattg cttaaacagc tgttggaaac
      961 ggctgtgttt caaaacaaca ttcgtgcgta caaccagatg tttagcatga cttcctttgg
     1021 ggcccgaatt gatgacataa taaatgatgt tcgtggtcct tatgttttca aaatatccgg
     1081 acaaatttac cattggattg gttccttgtg tccccaacaa ggaacccctc ctaggttctt
     1141 acagctctat atctatgata ctgaacatga ggtcgaaaac agaatggctc attttggcgg
     1201 gttggattcg ggtagtttgt gtcaggatgt agtttcgcgc ttgattagct tgctagatac
     1261 acacaatgaa ttggtaaagc ttttccgcac cgcaagagat aaatgtaccg gtgttgaagt
     1321 tcctacattc aatgttcatt tatttagtct taccggctct cagcaacatg cgttgccgac
     1381 ctctgacgca gtaggagaca ttgtattcga tagtggtcca gaggctatct ctgactatga
     1441 tgtcataatt gaaccacggt ctgatcgact taggcgaatc aacaaagtac atccttccta
     1501 catatcacta caattcccgc tgatgttttt tttatgatga accagggttt cgtccaggcc
     1561 tcatgttgcg tgatacacct ggttcacaga gtcagagatc gaaaaaatga cgatgaacat
     1621 gtattacagc taccagattc atgataggag cggtatttac agtttgatgc tacgtatggg
     1681 tcttctcttc cagcagtatg ttgtcacaat ttattgcagc atagaacttg atcggatgga
     1741 ttacattagg aaaaagcgaa aagatatacg aaatgagtat atatccggtt tgtaagacgt
     1801 tattaacaga ggcgatcaaa ctggcgccaa tgtcggtagt cgaacaattc tacccgctgc
     1861 tttcactggc ggcccccgtt acatgtatag ccattatttg gacgctctcg cgatttttca
     1921 ggttttcggt aacccactat tcttcatcac ctttacctgt aatgttaagt ggccagaaat
     1981 cgctcgatat ttacgccctt tcctcaccta acaccttcag atagagccga tattgttgca
     2041 cgcgtgttcc atgtaaaagt catagaattc gtagcgttct tgaaagaaga aaaatcgctt
     2101 ggcccttata gaagagtatt gtacacgatc gaattccaga agcggggcct gcctcattgc
     2161 catacgctgt tgtgggttta ttcagcaact gcagatccaa ttaccgatca tctagacgat
     2221 tacatatcgg ccgagttacc tgatcccaga gtcaatccag ctggttacgc ggttatttct
     2281 gcaactatga tgcatggtcc atgcagtctg ccaaatttta aggcgccttg tatggaaggt
     2341 ttcaattgct caaaaaaatt cccaaagttg tacaacgaaa agacgttctt cgattatgat
     2401 ggtagggccc actaccgacg acgcagcacc gacatatata caacccgttc cggggttaac
     2461 cttgataata gtatgtggtc ccttataatc gattactatg tatgacgttc caagcgcata
     2521 taaatgttga gttttgcggc gctacaatgc taatcaagta tctattcaag tatatttcaa
     2581 agggcacaga tcgtgtcgcc gctcgtattt caaggcctgt cgatagcaaa agccaacgta
     2641 cacctcaact ttctcaacca gttgatgaaa tacaaaactt cattgacgcc ctatttattt
     2701 gcccacacga ggcttgctgg cgcattctga atttcccgat ccattaccgt gacccagcgg
     2761 tccaaatcct agccgtacac ctagaaatta tgcaacttct taaatttcac gaacgacaac
     2821 cccttcaatc tattgtcgaa aatgccaaaa a
//
LOCUS       XM_071830523            2710 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840267), transcript variant X2, mRNA.
ACCESSION   XM_071830523
VERSION     XM_071830523.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2710
                     /gene="LOC139840267"
                     /note="uncharacterized LOC139840267; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840267"
     CDS             323..1396
                     /gene="LOC139840267"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686624.1"
                     /db_xref="GeneID:139840267"
                     /translation="MRPLRKRKKDNGKAHALDDYVPLSSQWPVGSVVSSGQVVKRAAL
                     CRCNNNSSTSAPLDPNYVAYVNAAVNSRPAVQLPVMFVQRGVAPLYTLFASFYCSALS
                     PLYRDSVGCDCICTQCGALFWHAERIKSSFKDKKIHYHRCCENGHVSLPHYEDPPVLL
                     KQLLETAVFQNNIRAYNQMFSMTSFGARIDDIINDVRGPYVFKISGQIYHWIGSLCPQ
                     QGTPPRFLQLYIYDTEHEVENRMAHFGGLDSGSLCQDVVSRLISLLDTHNELVKLFRT
                     ARDKCTGVEVPTFNVHLFSLTGSQQHALPTSDAVGDIVFDSGPEAISDYDVIIEPRSD
                     RLRRINKVHPSYISLQFPLMFFL"
ORIGIN      
        1 tccacgttta cacttatcta tcgtctctcg ggttttaatc atccctgttc ttaattcttt
       61 ttttttcgcg ccacaacaat cacctttctt gctctctttc aatttcttct tccctacagt
      121 ttttacagct ttcgtatatc ccgctttatc tgcaactcag gtacgatttt ttactgtttt
      181 ccattgatgt tattcagtat ctttaatggc tgtttgttgc cctctcttat ggatgctatg
      241 ggctgccttt tattgatcga ttatttcatc cttttaaagc tgtatttttt tgtcttcgta
      301 aattattttg ctgattttca taatgagacc cttgagaaaa agaaagaaag ataacggtaa
      361 ggcacatgcg cttgatgatt atgttccttt gtcaagtcaa tggcctgtag ggtctgttgt
      421 ttcctccggg caggttgtta aacgagccgc cttgtgtcgt tgtaacaata attcgtcgac
      481 ctcggctcct ctggatccta attatgttgc ttatgttaat gctgctgtta attctaggcc
      541 tgctgtacaa ttgcctgtca tgtttgtaca acggggagtt gcgccactat acactttgtt
      601 cgcgtcgttc tattgctcag ctctttcacc gttgtatcgt gattctgtcg ggtgtgactg
      661 catttgcacg caatgtggtg ctctcttctg gcatgctgaa cgtatcaagt ctagctttaa
      721 agacaagaaa atacattatc atcgctgctg tgaaaacggg catgtttcgt taccgcatta
      781 tgaggaccct cctgtattgc ttaaacagct gttggaaacg gctgtgtttc aaaacaacat
      841 tcgtgcgtac aaccagatgt ttagcatgac ttcctttggg gcccgaattg atgacataat
      901 aaatgatgtt cgtggtcctt atgttttcaa aatatccgga caaatttacc attggattgg
      961 ttccttgtgt ccccaacaag gaacccctcc taggttctta cagctctata tctatgatac
     1021 tgaacatgag gtcgaaaaca gaatggctca ttttggcggg ttggattcgg gtagtttgtg
     1081 tcaggatgta gtttcgcgct tgattagctt gctagataca cacaatgaat tggtaaagct
     1141 tttccgcacc gcaagagata aatgtaccgg tgttgaagtt cctacattca atgttcattt
     1201 atttagtctt accggctctc agcaacatgc gttgccgacc tctgacgcag taggagacat
     1261 tgtattcgat agtggtccag aggctatctc tgactatgat gtcataattg aaccacggtc
     1321 tgatcgactt aggcgaatca acaaagtaca tccttcctac atatcactac aattcccgct
     1381 gatgtttttt ttatgatgaa ccagggtttc gtccaggcct catgttgcgt gatacacctg
     1441 gttcacagag tcagagatcg aaaaaatgac gatgaacatg tattacagct accagattca
     1501 tgataggagc ggtatttaca gtttgatgct acgtatgggt cttctcttcc agcagtatgt
     1561 tgtcacaatt tattgcagca tagaacttga tcggatggat tacattagga aaaagcgaaa
     1621 agatatacga aatgagtata tatccggttt gtaagacgtt attaacagag gcgatcaaac
     1681 tggcgccaat gtcggtagtc gaacaattct acccgctgct ttcactggcg gcccccgtta
     1741 catgtatagc cattatttgg acgctctcgc gatttttcag gttttcggta acccactatt
     1801 cttcatcacc tttacctgta atgttaagtg gccagaaatc gctcgatatt tacgcccttt
     1861 cctcacctaa caccttcaga tagagccgat attgttgcac gcgtgttcca tgtaaaagtc
     1921 atagaattcg tagcgttctt gaaagaagaa aaatcgcttg gcccttatag aagagtattg
     1981 tacacgatcg aattccagaa gcggggcctg cctcattgcc atacgctgtt gtgggtttat
     2041 tcagcaactg cagatccaat taccgatcat ctagacgatt acatatcggc cgagttacct
     2101 gatcccagag tcaatccagc tggttacgcg gttatttctg caactatgat gcatggtcca
     2161 tgcagtctgc caaattttaa ggcgccttgt atggaaggtt tcaattgctc aaaaaaattc
     2221 ccaaagttgt acaacgaaaa gacgttcttc gattatgatg gtagggccca ctaccgacga
     2281 cgcagcaccg acatatatac aacccgttcc ggggttaacc ttgataatag tatgtggtcc
     2341 cttataatcg attactatgt atgacgttcc aagcgcatat aaatgttgag ttttgcggcg
     2401 ctacaatgct aatcaagtat ctattcaagt atatttcaaa gggcacagat cgtgtcgccg
     2461 ctcgtatttc aaggcctgtc gatagcaaaa gccaacgtac acctcaactt tctcaaccag
     2521 ttgatgaaat acaaaacttc attgacgccc tatttatttg cccacacgag gcttgctggc
     2581 gcattctgaa tttcccgatc cattaccgtg acccagcggt ccaaatccta gccgtacacc
     2641 tagaaattat gcaacttctt aaatttcacg aacgacaacc ccttcaatct attgtcgaaa
     2701 atgccaaaaa
//
LOCUS       XM_071830524            2851 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840267), transcript variant X3, mRNA.
ACCESSION   XM_071830524
VERSION     XM_071830524.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2851
                     /gene="LOC139840267"
                     /note="uncharacterized LOC139840267; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840267"
     CDS             464..1537
                     /gene="LOC139840267"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686625.1"
                     /db_xref="GeneID:139840267"
                     /translation="MRPLRKRKKDNGKAHALDDYVPLSSQWPVGSVVSSGQVVKRAAL
                     CRCNNNSSTSAPLDPNYVAYVNAAVNSRPAVQLPVMFVQRGVAPLYTLFASFYCSALS
                     PLYRDSVGCDCICTQCGALFWHAERIKSSFKDKKIHYHRCCENGHVSLPHYEDPPVLL
                     KQLLETAVFQNNIRAYNQMFSMTSFGARIDDIINDVRGPYVFKISGQIYHWIGSLCPQ
                     QGTPPRFLQLYIYDTEHEVENRMAHFGGLDSGSLCQDVVSRLISLLDTHNELVKLFRT
                     ARDKCTGVEVPTFNVHLFSLTGSQQHALPTSDAVGDIVFDSGPEAISDYDVIIEPRSD
                     RLRRINKVHPSYISLQFPLMFFL"
ORIGIN      
        1 tttacactta tctatcgtct ctcgggtttt aatcatccct gttcttaatt cttttttttt
       61 cgcgccacaa caatcacctt tcttgctctc tttcaatttc ttcttcccta cagtttttac
      121 aggtacttca aattgctcta ttcatatgct ttctaatgca atttgtttgc tgtatataca
      181 gaatcccgta cttaatttac tggtacatag attaggtttt ttttttattt ttttttattt
      241 tggtatgatg ttctattgtt ttcatgtagc tttcgtatat cccgctttat ctgcaactca
      301 ggtacgattt tttactgttt tccattgatg ttattcagta tctttaatgg ctgtttgttg
      361 ccctctctta tggatgctat gggctgcctt ttattgatcg attatttcat ccttttaaag
      421 ctgtattttt ttgtcttcgt aaattatttt gctgattttc ataatgagac ccttgagaaa
      481 aagaaagaaa gataacggta aggcacatgc gcttgatgat tatgttcctt tgtcaagtca
      541 atggcctgta gggtctgttg tttcctccgg gcaggttgtt aaacgagccg ccttgtgtcg
      601 ttgtaacaat aattcgtcga cctcggctcc tctggatcct aattatgttg cttatgttaa
      661 tgctgctgtt aattctaggc ctgctgtaca attgcctgtc atgtttgtac aacggggagt
      721 tgcgccacta tacactttgt tcgcgtcgtt ctattgctca gctctttcac cgttgtatcg
      781 tgattctgtc gggtgtgact gcatttgcac gcaatgtggt gctctcttct ggcatgctga
      841 acgtatcaag tctagcttta aagacaagaa aatacattat catcgctgct gtgaaaacgg
      901 gcatgtttcg ttaccgcatt atgaggaccc tcctgtattg cttaaacagc tgttggaaac
      961 ggctgtgttt caaaacaaca ttcgtgcgta caaccagatg tttagcatga cttcctttgg
     1021 ggcccgaatt gatgacataa taaatgatgt tcgtggtcct tatgttttca aaatatccgg
     1081 acaaatttac cattggattg gttccttgtg tccccaacaa ggaacccctc ctaggttctt
     1141 acagctctat atctatgata ctgaacatga ggtcgaaaac agaatggctc attttggcgg
     1201 gttggattcg ggtagtttgt gtcaggatgt agtttcgcgc ttgattagct tgctagatac
     1261 acacaatgaa ttggtaaagc ttttccgcac cgcaagagat aaatgtaccg gtgttgaagt
     1321 tcctacattc aatgttcatt tatttagtct taccggctct cagcaacatg cgttgccgac
     1381 ctctgacgca gtaggagaca ttgtattcga tagtggtcca gaggctatct ctgactatga
     1441 tgtcataatt gaaccacggt ctgatcgact taggcgaatc aacaaagtac atccttccta
     1501 catatcacta caattcccgc tgatgttttt tttatgatga accagggttt cgtccaggcc
     1561 tcatgttgcg tgatacacct ggttcacaga gtcagagatc gaaaaaatga cgatgaacat
     1621 gtattacagc taccagattc atgataggag cggtatttac agtttgatgc tacgtatggg
     1681 tcttctcttc cagcagtatg ttgtcacaat ttattgcagc atagaacttg atcggatgga
     1741 ttacattagg aaaaagcgaa aagatatacg aaatgagtat atatccggtt tgtaagacgt
     1801 tattaacaga ggcgatcaaa ctggcgccaa tgtcggtagt cgaacaattc tacccgctgc
     1861 tttcactggc ggcccccgtt acatgtatag ccattatttg gacgctctcg cgatttttca
     1921 ggttttcggt aacccactat tcttcatcac ctttacctgt aatgttaagt ggccagaaat
     1981 cgctcgatat ttacgccctt tcctcaccta acaccttcag atagagccga tattgttgca
     2041 cgcgtgttcc atgtaaaagt catagaattc gtagcgttct tgaaagaaga aaaatcgctt
     2101 ggcccttata gaagagtatt gtacacgatc gaattccaga agcggggcct gcctcattgc
     2161 catacgctgt tgtgggttta ttcagcaact gcagatccaa ttaccgatca tctagacgat
     2221 tacatatcgg ccgagttacc tgatcccaga gtcaatccag ctggttacgc ggttatttct
     2281 gcaactatga tgcatggtcc atgcagtctg ccaaatttta aggcgccttg tatggaaggt
     2341 ttcaattgct caaaaaaatt cccaaagttg tacaacgaaa agacgttctt cgattatgat
     2401 ggtagggccc actaccgacg acgcagcacc gacatatata caacccgttc cggggttaac
     2461 cttgataata gtatgtggtc ccttataatc gattactatg tatgacgttc caagcgcata
     2521 taaatgttga gttttgcggc gctacaatgc taatcaagta tctattcaag tatatttcaa
     2581 agggcacaga tcgtgtcgcc gctcgtattt caaggcctgt cgatagcaaa agccaacgta
     2641 cacctcaact ttctcaacca gttgatgaaa tacaaaactt cattgacgcc ctatttattt
     2701 gcccacacga ggcttgctgg cgcattctga atttcccgat ccattaccgt gacccagcgg
     2761 tccaaatcct agccgtacac ctagaaatta tgcaacttct taaatttcac gaacgacaac
     2821 cccttcaatc tattgtcgaa aatgccaaaa a
//
LOCUS       XM_071830525             774 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NONRESPONDING TO
            OXYLIPINS 2, mitochondrial-like (LOC139840268), transcript variant
            X1, mRNA.
ACCESSION   XM_071830525
VERSION     XM_071830525.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..774
                     /gene="LOC139840268"
                     /note="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139840268"
     CDS             159..461
                     /gene="LOC139840268"
                     /codon_start=1
                     /product="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like isoform X1"
                     /protein_id="XP_071686626.1"
                     /db_xref="GeneID:139840268"
                     /translation="MASRCNRFLNKTSISNLKSAFKSSSIPKSTPSSPKFNLPTASPV
                     PRFSISRCPSELGCVQSLLPLHNAVAAARLTSCLSTTSRSCRSLSQGTLCRTSPDL"
ORIGIN      
        1 caccaaccaa atcgggccgg attgtatccg cgtataaaaa cgcaaacgac ccgatatctc
       61 aacactcgca tgccctaaaa cccaaaaccc taaaaaatca atcaataact tttcgactag
      121 tatttcacca cagatctcca gtcctcgtga tattggcaat ggcttcaagg tgcaacagat
      181 tcctcaacaa aacctcaatt tctaatctca agtccgcttt caaatcttca tccattccta
      241 aatcaacacc ttcatcccca aaattcaatc ttcctaccgc atcacctgtt cctcgcttct
      301 caatttcaag gtgtccgtca gaacttggat gtgtgcagtc actgttgccg ctacataatg
      361 cggttgctgc tgcaagattg acatcatgct tgagtacaac ttcaaggagt tgtagatctc
      421 tttcacaggg tacactctgc cgtacctctc ccgacctcta atatcatgtc tttttgttat
      481 ttgcttagct gggtttatcg gttccaaggt gacttgttag cagacatatg gattgagaaa
      541 cgttaagtta ttgaacaaga agacaggttt tgtatctcgt tcaaattatt ttgtaattca
      601 taaaaagatg tttgaaagct ctacacatca gcttttttat gatcttggtt ctgcatagca
      661 caaaacagtt taagctgagt tggttttcga gaattaatgc attagccgtt gctattcttg
      721 tttaggtttt actgtttact gctcaaatac ctctctcaga tatgtcgttt gtct
//
LOCUS       XR_011757309             816 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NONRESPONDING TO
            OXYLIPINS 2, mitochondrial-like (LOC139840268), transcript variant
            X2, misc_RNA.
ACCESSION   XR_011757309
VERSION     XR_011757309.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..816
                     /gene="LOC139840268"
                     /note="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139840268"
     misc_RNA        1..816
                     /gene="LOC139840268"
                     /product="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like, transcript variant X2"
                     /db_xref="GeneID:139840268"
ORIGIN      
        1 gcaccaacca aatcgggccg gattgtatcc gcgtataaaa acgcaaacga cccgatatct
       61 caacactcgc atgccctaaa acccaaaacc ctaaaaaatc aatcaataac ttttcgacta
      121 gtatttcacc acagatctcc agtcctcgtg atattggcaa tggcttcaag gtgcaacaga
      181 ttcctcaaca aaacctcaat ttctaatctc aagtccgctt tcaaatcttc atccattcct
      241 aaatcaacac cttcatcccc aaaattcaat cttcctaccg catcacctgt tcctcgcttc
      301 tcaatttcaa ggtgtccgtc agaacttgga tgtgtgcagt cactgttgcc gctacataat
      361 gcggttgctg ctgcaagatt gacatcatgc ttgagtacaa cttcaaggag ttgtagatct
      421 ctttcacagg gtacactctg ccgtacctct cccgacctct aatatcatgt ctttttgtta
      481 tttgcttatg aatttgatgg tacgtgatac attatgctgt ttcttgagag ctgggtttat
      541 cggttccaag gtgacttgtt agcagacata tggattgaga aacgttaagt tattgaacaa
      601 gaagacaggt tttgtatctc gttcaaatta ttttgtaatt cataaaaaga tgtttgaaag
      661 ctctacacat cagctttttt atgatcttgg ttctgcatag cacaaaacag tttaagctga
      721 gttggttttc gagaattaat gcattagccg ttgctattct tgtttaggtt ttactgttta
      781 ctgctcaaat acctctctca gatatgtcgt ttgtct
//
LOCUS       XM_071830526             777 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NONRESPONDING TO
            OXYLIPINS 2, mitochondrial-like (LOC139840268), transcript variant
            X3, mRNA.
ACCESSION   XM_071830526
VERSION     XM_071830526.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..777
                     /gene="LOC139840268"
                     /note="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139840268"
     CDS             159..461
                     /gene="LOC139840268"
                     /codon_start=1
                     /product="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like isoform X1"
                     /protein_id="XP_071686627.1"
                     /db_xref="GeneID:139840268"
                     /translation="MASRCNRFLNKTSISNLKSAFKSSSIPKSTPSSPKFNLPTASPV
                     PRFSISRCPSELGCVQSLLPLHNAVAAARLTSCLSTTSRSCRSLSQGTLCRTSPDL"
ORIGIN      
        1 caccaaccaa atcgggccgg attgtatccg cgtataaaaa cgcaaacgac ccgatatctc
       61 aacactcgca tgccctaaaa cccaaaaccc taaaaaatca atcaataact tttcgactag
      121 tatttcacca cagatctcca gtcctcgtga tattggcaat ggcttcaagg tgcaacagat
      181 tcctcaacaa aacctcaatt tctaatctca agtccgcttt caaatcttca tccattccta
      241 aatcaacacc ttcatcccca aaattcaatc ttcctaccgc atcacctgtt cctcgcttct
      301 caatttcaag gtgtccgtca gaacttggat gtgtgcagtc actgttgccg ctacataatg
      361 cggttgctgc tgcaagattg acatcatgct tgagtacaac ttcaaggagt tgtagatctc
      421 tttcacaggg tacactctgc cgtacctctc ccgacctcta atatcatgtc tttttgttat
      481 ttgcttatgc atttgatgga tcgtgataca ttttgctgtt tgtagaggtg ggatctcgtc
      541 atcatgctaa tagcaaggaa ctttactcag acattacatg atgcatttaa tgatttacaa
      601 acccattact catttggttg cgaaatgttt gattgttttg ttgaacccta tgaactgttt
      661 gaaagtaggt tgtttgtttt agaatatgta acaacataat gctgtaacaa ataaaaatct
      721 acaaatcttt atacttatgg ctcacaatag agtattttag taacatgaga ttcttgt
//
LOCUS       XM_071830527             602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NONRESPONDING TO
            OXYLIPINS 2, mitochondrial-like (LOC139840268), transcript variant
            X4, mRNA.
ACCESSION   XM_071830527
VERSION     XM_071830527.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..602
                     /gene="LOC139840268"
                     /note="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139840268"
     CDS             160..462
                     /gene="LOC139840268"
                     /codon_start=1
                     /product="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like isoform X1"
                     /protein_id="XP_071686628.1"
                     /db_xref="GeneID:139840268"
                     /translation="MASRCNRFLNKTSISNLKSAFKSSSIPKSTPSSPKFNLPTASPV
                     PRFSISRCPSELGCVQSLLPLHNAVAAARLTSCLSTTSRSCRSLSQGTLCRTSPDL"
ORIGIN      
        1 gcaccaacca aatcgggccg gattgtatcc gcgtataaaa acgcaaacga cccgatatct
       61 caacactcgc atgccctaaa acccaaaacc ctaaaaaatc aatcaataac ttttcgacta
      121 gtatttcacc acagatctcc agtcctcgtg atattggcaa tggcttcaag gtgcaacaga
      181 ttcctcaaca aaacctcaat ttctaatctc aagtccgctt tcaaatcttc atccattcct
      241 aaatcaacac cttcatcccc aaaattcaat cttcctaccg catcacctgt tcctcgcttc
      301 tcaatttcaa ggtgtccgtc agaacttgga tgtgtgcagt cactgttgcc gctacataat
      361 gcggttgctg ctgcaagatt gacatcatgc ttgagtacaa cttcaaggag ttgtagatct
      421 ctttcacagg gtacactctg ccgtacctct cccgacctct aatatcatgt ctttttgtta
      481 tttgcttgca catgattttt gtaatgcatg aaagaaatga actgggattt acaagacttg
      541 tcttcatatc aagtttcagt gctcgtcaac catcttaaga aattttaggc taataattag
      601 ac
//
LOCUS       XM_071830528             715 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NONRESPONDING TO
            OXYLIPINS 2, mitochondrial-like (LOC139840268), transcript variant
            X5, mRNA.
ACCESSION   XM_071830528
VERSION     XM_071830528.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..715
                     /gene="LOC139840268"
                     /note="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139840268"
     CDS             157..453
                     /gene="LOC139840268"
                     /codon_start=1
                     /product="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like isoform X2"
                     /protein_id="XP_071686629.1"
                     /db_xref="GeneID:139840268"
                     /translation="MASRCNRFLNKTSISNLKSAFKSSSIPKSTPSSPKFNLPTASPV
                     PRFSISRCPSELGCVQSLLPLHNAVAAARLTSCLSTTSRSCRSLSQELGLSVPR"
ORIGIN      
        1 ccaaccaaat cgggccggat tgtatccgcg tataaaaacg caaacgaccc gatatctcaa
       61 cactcgcatg ccctaaaacc caaaacccta aaaaatcaat caataacttt tcgactagta
      121 tttcaccaca gatctccagt cctcgtgata ttggcaatgg cttcaaggtg caacagattc
      181 ctcaacaaaa cctcaatttc taatctcaag tccgctttca aatcttcatc cattcctaaa
      241 tcaacacctt catccccaaa attcaatctt cctaccgcat cacctgttcc tcgcttctca
      301 atttcaaggt gtccgtcaga acttggatgt gtgcagtcac tgttgccgct acataatgcg
      361 gttgctgctg caagattgac atcatgcttg agtacaactt caaggagttg tagatctctt
      421 tcacaggagc tgggtttatc ggttccaagg tgacttgtta gcagacatat ggattgagaa
      481 acgttaagtt attgaacaag aagacaggtt ttgtatctcg ttcaaattat tttgtaattc
      541 ataaaaagat gtttgaaagc tctacacatc agctttttta tgatcttggt tctgcatagc
      601 acaaaacagt ttaagctgag ttggttttcg agaattaatg cattagccgt tgctattctt
      661 gtttaggttt tactgtttac tgctcaaata cctctctcag atatgtcgtt tgtct
//
LOCUS       XM_071830529             757 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NONRESPONDING TO
            OXYLIPINS 2, mitochondrial-like (LOC139840268), transcript variant
            X6, mRNA.
ACCESSION   XM_071830529
VERSION     XM_071830529.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..757
                     /gene="LOC139840268"
                     /note="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139840268"
     CDS             158..448
                     /gene="LOC139840268"
                     /codon_start=1
                     /product="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like isoform X3"
                     /protein_id="XP_071686630.1"
                     /db_xref="GeneID:139840268"
                     /translation="MASRCNRFLNKTSISNLKSAFKSSSIPKSTPSSPKFNLPTASPV
                     PRFSISRCPSELGCVQSLLPLHNAVAAARLTSCLSTTSRSCRSLSQDEFDGT"
ORIGIN      
        1 accaaccaaa tcgggccgga ttgtatccgc gtataaaaac gcaaacgacc cgatatctca
       61 acactcgcat gccctaaaac ccaaaaccct aaaaaatcaa tcaataactt ttcgactagt
      121 atttcaccac agatctccag tcctcgtgat attggcaatg gcttcaaggt gcaacagatt
      181 cctcaacaaa acctcaattt ctaatctcaa gtccgctttc aaatcttcat ccattcctaa
      241 atcaacacct tcatccccaa aattcaatct tcctaccgca tcacctgttc ctcgcttctc
      301 aatttcaagg tgtccgtcag aacttggatg tgtgcagtca ctgttgccgc tacataatgc
      361 ggttgctgct gcaagattga catcatgctt gagtacaact tcaaggagtt gtagatctct
      421 ttcacaggat gaatttgatg gtacgtgata cattatgctg tttcttgaga gctgggttta
      481 tcggttccaa ggtgacttgt tagcagacat atggattgag aaacgttaag ttattgaaca
      541 agaagacagg ttttgtatct cgttcaaatt attttgtaat tcataaaaag atgtttgaaa
      601 gctctacaca tcagcttttt tatgatcttg gttctgcata gcacaaaaca gtttaagctg
      661 agttggtttt cgagaattaa tgcattagcc gttgctattc ttgtttaggt tttactgttt
      721 actgctcaaa tacctctctc agatatgtcg tttgtct
//
LOCUS       XM_071830530             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NONRESPONDING TO
            OXYLIPINS 2, mitochondrial-like (LOC139840268), transcript variant
            X7, mRNA.
ACCESSION   XM_071830530
VERSION     XM_071830530.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139840268"
                     /note="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139840268"
     CDS             159..449
                     /gene="LOC139840268"
                     /codon_start=1
                     /product="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like isoform X4"
                     /protein_id="XP_071686631.1"
                     /db_xref="GeneID:139840268"
                     /translation="MASRCNRFLNKTSISNLKSAFKSSSIPKSTPSSPKFNLPTASPV
                     PRFSISRCPSELGCVQSLLPLHNAVAAARLTSCLSTTSRSCRSLSQDAFDGS"
ORIGIN      
        1 caccaaccaa atcgggccgg attgtatccg cgtataaaaa cgcaaacgac ccgatatctc
       61 aacactcgca tgccctaaaa cccaaaaccc taaaaaatca atcaataact tttcgactag
      121 tatttcacca cagatctcca gtcctcgtga tattggcaat ggcttcaagg tgcaacagat
      181 tcctcaacaa aacctcaatt tctaatctca agtccgcttt caaatcttca tccattccta
      241 aatcaacacc ttcatcccca aaattcaatc ttcctaccgc atcacctgtt cctcgcttct
      301 caatttcaag gtgtccgtca gaacttggat gtgtgcagtc actgttgccg ctacataatg
      361 cggttgctgc tgcaagattg acatcatgct tgagtacaac ttcaaggagt tgtagatctc
      421 tttcacagga tgcatttgat ggatcgtgat acattttgct gtttgtagag gtgggatctc
      481 gtcatcatgc taatagcaag gaactttact cagacattac atgatgcatt taatgattta
      541 caaacccatt actcatttgg ttgcgaaatg tttgattgtt ttgttgaacc ctatgaactg
      601 tttgaaagta ggttgtttgt tttagaatat gtaacaacat aatgctgtaa caaataaaaa
      661 tctacaaatc tttatactta tggctcacaa tagagtattt tagtaacatg agattcttgt
//
LOCUS       XM_071830531             551 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NONRESPONDING TO
            OXYLIPINS 2, mitochondrial-like (LOC139840268), transcript variant
            X8, mRNA.
ACCESSION   XM_071830531
VERSION     XM_071830531.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..551
                     /gene="LOC139840268"
                     /note="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139840268"
     CDS             156..434
                     /gene="LOC139840268"
                     /codon_start=1
                     /product="protein NONRESPONDING TO OXYLIPINS 2,
                     mitochondrial-like isoform X5"
                     /protein_id="XP_071686632.1"
                     /db_xref="GeneID:139840268"
                     /translation="MASRCNRFLNKTSISNLKSAFKSSSIPKSTPSSPKFNLPTASPV
                     PRFSISRCPSELGCVQSLLPLHNAVAAARLTSCLSTTSRSCRSLSQGT"
ORIGIN      
        1 caaccaaatc gggccggatt gtatccgcgt ataaaaacgc aaacgacccg atatctcaac
       61 actcgcatgc cctaaaaccc aaaaccctaa aaaatcaatc aataactttt cgactagtat
      121 ttcaccacag atctccagtc ctcgtgatat tggcaatggc ttcaaggtgc aacagattcc
      181 tcaacaaaac ctcaatttct aatctcaagt ccgctttcaa atcttcatcc attcctaaat
      241 caacaccttc atccccaaaa ttcaatcttc ctaccgcatc acctgttcct cgcttctcaa
      301 tttcaaggtg tccgtcagaa cttggatgtg tgcagtcact gttgccgcta cataatgcgg
      361 ttgctgctgc aagattgaca tcatgcttga gtacaacttc aaggagttgt agatctcttt
      421 cacagggcac atgatttttg taatgcatga aagaaatgaa ctgggattta caagacttgt
      481 cttcatatca agtttcagtg ctcgtcaacc atcttaagaa attttaggct aataattaga
      541 ccgagttaca a
//
LOCUS       XM_071830532            4312 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840269), transcript variant X1, mRNA.
ACCESSION   XM_071830532
VERSION     XM_071830532.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4312
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4312
                     /gene="LOC139840269"
                     /note="uncharacterized LOC139840269; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840269"
     CDS             8..4012
                     /gene="LOC139840269"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686633.1"
                     /db_xref="GeneID:139840269"
                     /translation="MKFLHLQIPLKDVLEATNNFDDKNVIGGGDLGEVYQGLLLWSGK
                     LVKIAARRFYSKHKHGIEFWREISALSSHDHKNIVSLIGFCDEQKEKVIIYKREAKGS
                     LMMYLSSPKLTWIQRLRISIGIARALCYIHNKDQNNYSLIHRNINSSTILLDNKFEPK
                     LSGFEYSINHSLHGMDDVVFSHAIGTKGYMDPEIVKTGGVTHKSDIYSFGVVLLEILC
                     GRKAFLPNEDDDRFLVSLAKLNYEKEKDVRVPSSLYDQMCHQSHQTFTSAAILCVNDD
                     RLQRRDMKYIVQELEKALELQLPYESLTTANLEHVTSQLSHLKISLRDITLATDEFSE
                     EYLIGMNTFYYLYRAEFGHWDKKNSVSVEENDKSESPKRSTTVIIKRLLPREDNIGED
                     VFRTEVEMLATCKHHSIVTLLGFCNEDLEKILIIEDASNGYLCQYLMNNLERSILTWE
                     KRLKICLDIANGLKYQHHEMEDQKTVISRYVSTFSISLDENFGAKIFDFGQSVFIPPN
                     LDAHCLGEIKGFSPYMDPEYVMSGKLRRESDVYAFGLVLFEMLFGKLADDQIYKPDSK
                     DGLAYVTRRCMEMIDPVIKEKSDDNNSSTTKGPIKDSIYTFVKIAYWCLGETHDKRPT
                     MEDVVKELKKALSFQKQVQCQDSEQDVDGYDNSVSVSEYSNYAAESLKWDNLKDDILK
                     HLKIPLSDILVATDNFSNEYLHRFQGHHKLYQAKLEHGQEDFSSVEENNKSELPKRHI
                     NVLMKRLITREEYRKRDQELFCNEIQILTTCNHHNIVPLLGFCDEDSEMILIFDITIK
                     IYLDMYLNSIHRPILTWAERLRICLDIAYGLEYLHYEMEDQKKIIHRHMDSCFIALDE
                     NFRAQIASFDYSVFLPPYLDDLTLYQDKVFGILGYGDPEYLNTGKLKRESDVYSFGVI
                     LCEILWGKTAESHFEVSQKQLAYEIRRCIDEGTLKNMVDPQIKEERSDGFTLNRGPNK
                     NSLVAFLEIAVACLVETQDKRPTIKVVIEELNKALLFQVNYKDTIMISLEDIQVATQN
                     FHDKNCVGGGGFGKVYKGKLPQSDNTVVAKRLDTNGSQGDKQFRNELQILFNFKHDNI
                     ISLVGYCDEIDAKIIVYEYAIRGSLDTHLNDSRLNWMKRLNICIDIATALNFLHGGNK
                     TLATVIHRDIKPDNILLTGDWKAKLGDFGLSLTSSITNETDFVIDHACGTEGYVDPLY
                     MKSRFLTKESDIYSFGVVLFEILCGRSTFDCKKQDGVHLSVFIKDRFEKGKGKLDAIV
                     FEKIKQKIMPEALSVFQMIAYQCLNENSEKRPEAKEVVKQLKKALEFQMSKEVTELLD
                     TAGRVVLKYRTTGC"
     misc_feature    83..883
                     /gene="LOC139840269"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(83..94,101..103,107..109,152..154,158..160,242..244,
                     290..301,440..442,452..457,461..463,491..496)
                     /gene="LOC139840269"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1130..1909
                     /gene="LOC139840269"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2240..3022
                     /gene="LOC139840269"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    3116..3922
                     /gene="LOC139840269"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3116..3127,3134..3136,3140..3142,3182..3184,
                     3185..3187,3272..3274,3320..3331,3470..3472,3482..3487,
                     3491..3493,3521..3526)
                     /gene="LOC139840269"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 aacagttatg aagtttcttc acttacaaat cccactgaaa gacgtactag aagcgaccaa
       61 caactttgat gataaaaatg tcatcggggg tggtgatttg ggtgaagttt atcaaggact
      121 gcttttgtgg tcagggaagt tggtgaaaat cgctgctcgg agattttaca gtaagcataa
      181 gcacggcatc gagttctgga gagagatttc tgcgctttct agtcacgatc ataaaaacat
      241 agtctctctt atcgggtttt gtgatgaaca aaaggagaag gtcatcatat acaagcgtga
      301 ggccaaggga agtctcatga tgtatctaag tagcccaaag cttacttgga ttcaaagatt
      361 gaggataagc attggtattg cacgtgcttt atgttacatc cataataagg accaaaacaa
      421 ttactctctt atacatcgaa atatcaacag ctccacgata ttgttagata ataagtttga
      481 gcccaagtta tccggatttg aatattccat caatcattca ctacatggaa tggatgatgt
      541 tgtgttttca catgctatag gaacaaaagg gtatatggac ccagaaatag tgaagactgg
      601 tggtgtgacc cacaagtccg atatctactc atttggtgtt gttttattgg aaatattatg
      661 tgggaggaaa gcgtttttac caaatgagga tgatgatagg tttctagttt cattggccaa
      721 actcaactat gaaaaagaaa aagatgttag agtcccatct agcttatatg atcaaatgtg
      781 tcatcaatca caccaaacct tcacatcagc agcaatattg tgcgtaaacg atgatcggct
      841 acaacgaaga gatatgaagt atattgtcca ggaacttgaa aaggcattgg aacttcaact
      901 accatatgaa agtttaacta cagccaactt ggaacacgtg acatcccaac tcagtcactt
      961 gaagattagt ctccgtgata taactttggc cactgatgaa ttttctgaag aatacttaat
     1021 agggatgaat acgttctatt acctatacag agcagaattt ggacattggg ataaaaaaaa
     1081 ttctgtctcc gtagaagaga atgataaaag cgaaagtccc aagagaagca caactgtcat
     1141 tatcaaacgc ctgctgcctc gagaagacaa tattggagaa gatgtattcc gtacagaggt
     1201 tgaaatgctt gcaacttgta aacatcacag catagtcact ctacttggat tttgtaatga
     1261 agatctcgag aagatcctta tcattgagga tgcttctaat ggataccttt gtcaatattt
     1321 gatgaacaac ttagagagat ctattcttac ttgggaaaag cgtttgaaaa tatgtcttga
     1381 tatcgcaaat ggattgaagt accaacacca tgagatggaa gaccaaaaga cagtaataag
     1441 ccgttatgtc tctacattct caatttcctt agatgagaat tttggggcaa agatttttga
     1501 ctttgggcaa tcagtcttca ttcctccgaa cctagatgct cattgtctcg gtgaaataaa
     1561 gggcttttca ccttacatgg atccagaata tgttatgagt ggtaagttaa gaagagaatc
     1621 agatgtgtat gctttcggat tagttttgtt cgaaatgtta tttggaaagc tagccgacga
     1681 tcaaatttac aagccggata gtaaagatgg gctggcatat gtgacacgtc gatgcatgga
     1741 aatgatagat cctgtaatca aggaaaaaag tgatgacaac aattcttcta caactaaagg
     1801 acccatcaaa gattctatat acacatttgt gaaaattgca tattggtgtt tgggtgaaac
     1861 tcatgacaaa cgtccaacaa tggaggatgt cgttaaggag ctcaagaaag cattatcgtt
     1921 tcaaaagcaa gtacaatgcc aagattccga acaagatgtt gatggatatg ataattctgt
     1981 atcagtatcg gaatattcaa attatgcagc tgaaagtctt aaatgggaca atttgaagga
     2041 tgatatcttg aagcacctta aaattccact cagtgatatc ctagtggcaa cagataactt
     2101 ttccaatgaa tacctccatc ggtttcaagg tcaccataag ttgtaccaag caaaacttga
     2161 gcatggtcaa gaagattttt cttcggtaga agagaacaat aaaagcgaac tacccaagag
     2221 acatatcaac gtgttgatga aacgcctcat caccagagaa gagtaccgca aaagagatca
     2281 agaattattc tgtaacgaaa tccaaattct taccacttgt aatcatcata acatagtccc
     2341 tctacttgga ttttgtgatg aagattccga gatgatcctc atttttgata tcactatcaa
     2401 gatatacctt gatatgtatt taaacagcat ccacagacct attcttactt gggcagaacg
     2461 tttgagaata tgccttgata ttgcatatgg attggagtac ctacactatg agatggaaga
     2521 ccaaaagaag ataatacatc gtcatatgga tagctgcttt attgctttag atgagaattt
     2581 tagggcacaa attgccagtt ttgattactc tgtattcctt cctccatatc ttgatgacct
     2641 tactctttat caagataagg tttttggtat ccttggttac ggagatccag aatatctgaa
     2701 tacaggtaag ttaaaaagag aatcagatgt atatagtttt ggagtaattt tgtgcgaaat
     2761 tttatgggga aaaaccgcgg aatcacactt tgaggtgagt caaaaacagt tggcgtatga
     2821 aatacgaaga tgcatcgatg agggaacctt aaagaatatg gtagatcctc aaattaaaga
     2881 agaaagaagt gacgggttta ccctgaatag aggacccaac aaaaattctt tagttgcatt
     2941 tttggagatc gcagttgcgt gtttggtaga aactcaagac aaacgtccca caattaaagt
     3001 tgttatcgag gagctcaaca aagccttatt gtttcaagta aactacaaag acaccatcat
     3061 gatttcactt gaagacatac aagtagctac acaaaacttc catgataaaa attgtgttgg
     3121 cggaggaggg tttgggaaag tttataaagg aaaacttcca caaagtgata atacagttgt
     3181 tgcaaaacga ttggatacaa atggtagtca aggtgataag caatttcgga atgagcttca
     3241 aattcttttt aactttaagc atgataatat cattagtctt gtaggctatt gtgatgaaat
     3301 agatgcaaaa atcattgtct atgagtatgc aataagagga agtctagata cgcacttgaa
     3361 tgatagtcgt cttaattgga tgaaacgact taatatatgc attgatattg cgacagcact
     3421 gaatttcctt catgggggaa acaaaacact agcaacggtt atacataggg acatcaaacc
     3481 tgataacatt ttgctaaccg gtgactggaa agcaaaactt ggtgattttg gactttcttt
     3541 gacaagttca ataactaatg aaaccgactt cgtcattgat catgcgtgcg ggacagaagg
     3601 ctacgtggat ccactttaca tgaaatctcg tttcttaact aaagaatctg atatatattc
     3661 gttcggtgta gttttatttg aaatcttgtg tggaagatca acgttcgatt gcaaaaaaca
     3721 ggatggtgtg catctatcag ttttcattaa agacagattt gaaaaaggaa aaggaaaact
     3781 tgatgcaatt gtatttgaga aaataaaaca aaagatcatg cctgaagcat tgagtgtatt
     3841 tcaaatgata gcctaccagt gcttaaatga gaacagcgaa aaacgaccag aagcaaaaga
     3901 agttgtgaaa caacttaaga aggcattgga atttcaaatg tcgaaagagg tgacagagct
     3961 tctggatact gcaggtcgtg ttgtgttaaa atatcgtact acaggttgtt aatttgaggc
     4021 tctaaatggt tctggactgt gaggagctaa agtgtaatag tttgatgatt gttcgtggct
     4081 aaaatttcga gacataaagt caagggacca aagtgcaaga ttggtgttac aaatataaat
     4141 accatttatc cgttgtggtt gtgaatatgt ttctcatatt tttcaaacac atttgttcat
     4201 attctctgtt ttagtttaaa gttggaggtc tagaggttga tgatgttatc tgttattgct
     4261 ttctattact cttttcatca caaaatcagt gtgttgacct ttgttattct ta
//
LOCUS       XM_071830533            4108 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840269), transcript variant X2, mRNA.
ACCESSION   XM_071830533
VERSION     XM_071830533.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4108
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4108
                     /gene="LOC139840269"
                     /note="uncharacterized LOC139840269; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840269"
     CDS             8..3808
                     /gene="LOC139840269"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686634.1"
                     /db_xref="GeneID:139840269"
                     /translation="MKFLHLQIPLKDVLEATNNFDDKNVIGGGDLGEVYQGLLLWSGK
                     LVKIAARRFYSKHKHGIEFWREISALSSHDHKNIVSLIGFCDEQKEKVIIYKREAKGS
                     LMMYLSSPKLTWIQRLRISIGIARALCYIHNKDQNNYSLIHRNINSSTILLDNKFEPK
                     LSGFEYSINHSLHGMDDVVFSHAIGTKGYMDPEIVKTGGVTHKSDIYSFGVVLLEILC
                     GRKAFLPNEDDDRFLVSLAKLNYEKEKDVRVPSSLYDQMCHQSHQTFTSAAILCVNDD
                     RLQRRDMKYIVQELEKALELQLPYESLTTANLEHVTSQLSHLKISLRDITLATDEFSE
                     EYLIGMNTFYYLYRAEFGHWDKKNSVSVEENDKSESPKRSTTVIIKRLLPREDNIGED
                     VFRTEVEMLATCKHHSIVTLLGFCNEDLEKILIIEDASNGYLCQYLMNNLERSILTWE
                     KRLKICLDIANGLKYQHHEMEDQKTVISRYVSTFSISLDENFGAKIFDFGQSVFIPPN
                     LDAHCLGEIKGFSPYMDPEYVMSGKLRRESDVYAFGLVLFEMLFGKLADDQIYKPDSK
                     DGLAYVTRRCMEMIDPVIKEKSDDNNSSTTKGPIKDSIYTFVKIAYWCLGETHDKRPT
                     MEDVVKELKKALSFQKQVQCQDSEQDVDGYDNSVSVSEYSNYAAESLKWDNLKDDILK
                     HLKIPLSDILVATDNFSNEYLHRFQGHHKLYQAKLEHGQEDFSSVEENNKSELPKRHI
                     NVLMKRLITREEYRKRDQELFCNEIQILTTCNHHNIVPLLGFCDEDSEMILIFDITIK
                     IYLDMYLNSIHRPILTWAERLRICLDIAYGLEYLHYEMEDQKKIIHRHMDSCFIALDE
                     NFRAQIASFDYSVFLPPYLDDLTLYQDKVFGILGYGDPEYLNTGKLKRESDVYSFGVI
                     LCEILWGKTAESHFEVSQKQLAYEIRRCIDEGTLKNMVDPQIKEERSDGFTLNRGPNK
                     NSLVAFLEIAVACLVETQDKRPTIKVVIEELNKALLFQVNYKDTIMISLEDIQVATQN
                     FHDKNCVGGGGFGKVYKGKLPQSDNTVVAKRLDTNGSQALNFLHGGNKTLATVIHRDI
                     KPDNILLTGDWKAKLGDFGLSLTSSITNETDFVIDHACGTEGYVDPLYMKSRFLTKES
                     DIYSFGVVLFEILCGRSTFDCKKQDGVHLSVFIKDRFEKGKGKLDAIVFEKIKQKIMP
                     EALSVFQMIAYQCLNENSEKRPEAKEVVKQLKKALEFQMSKEVTELLDTAGRVVLKYR
                     TTGC"
     misc_feature    83..883
                     /gene="LOC139840269"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(83..94,101..103,107..109,152..154,158..160,242..244,
                     290..301,440..442,452..457,461..463,491..496)
                     /gene="LOC139840269"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1130..1909
                     /gene="LOC139840269"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2240..3022
                     /gene="LOC139840269"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    3116..3718
                     /gene="LOC139840269"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 aacagttatg aagtttcttc acttacaaat cccactgaaa gacgtactag aagcgaccaa
       61 caactttgat gataaaaatg tcatcggggg tggtgatttg ggtgaagttt atcaaggact
      121 gcttttgtgg tcagggaagt tggtgaaaat cgctgctcgg agattttaca gtaagcataa
      181 gcacggcatc gagttctgga gagagatttc tgcgctttct agtcacgatc ataaaaacat
      241 agtctctctt atcgggtttt gtgatgaaca aaaggagaag gtcatcatat acaagcgtga
      301 ggccaaggga agtctcatga tgtatctaag tagcccaaag cttacttgga ttcaaagatt
      361 gaggataagc attggtattg cacgtgcttt atgttacatc cataataagg accaaaacaa
      421 ttactctctt atacatcgaa atatcaacag ctccacgata ttgttagata ataagtttga
      481 gcccaagtta tccggatttg aatattccat caatcattca ctacatggaa tggatgatgt
      541 tgtgttttca catgctatag gaacaaaagg gtatatggac ccagaaatag tgaagactgg
      601 tggtgtgacc cacaagtccg atatctactc atttggtgtt gttttattgg aaatattatg
      661 tgggaggaaa gcgtttttac caaatgagga tgatgatagg tttctagttt cattggccaa
      721 actcaactat gaaaaagaaa aagatgttag agtcccatct agcttatatg atcaaatgtg
      781 tcatcaatca caccaaacct tcacatcagc agcaatattg tgcgtaaacg atgatcggct
      841 acaacgaaga gatatgaagt atattgtcca ggaacttgaa aaggcattgg aacttcaact
      901 accatatgaa agtttaacta cagccaactt ggaacacgtg acatcccaac tcagtcactt
      961 gaagattagt ctccgtgata taactttggc cactgatgaa ttttctgaag aatacttaat
     1021 agggatgaat acgttctatt acctatacag agcagaattt ggacattggg ataaaaaaaa
     1081 ttctgtctcc gtagaagaga atgataaaag cgaaagtccc aagagaagca caactgtcat
     1141 tatcaaacgc ctgctgcctc gagaagacaa tattggagaa gatgtattcc gtacagaggt
     1201 tgaaatgctt gcaacttgta aacatcacag catagtcact ctacttggat tttgtaatga
     1261 agatctcgag aagatcctta tcattgagga tgcttctaat ggataccttt gtcaatattt
     1321 gatgaacaac ttagagagat ctattcttac ttgggaaaag cgtttgaaaa tatgtcttga
     1381 tatcgcaaat ggattgaagt accaacacca tgagatggaa gaccaaaaga cagtaataag
     1441 ccgttatgtc tctacattct caatttcctt agatgagaat tttggggcaa agatttttga
     1501 ctttgggcaa tcagtcttca ttcctccgaa cctagatgct cattgtctcg gtgaaataaa
     1561 gggcttttca ccttacatgg atccagaata tgttatgagt ggtaagttaa gaagagaatc
     1621 agatgtgtat gctttcggat tagttttgtt cgaaatgtta tttggaaagc tagccgacga
     1681 tcaaatttac aagccggata gtaaagatgg gctggcatat gtgacacgtc gatgcatgga
     1741 aatgatagat cctgtaatca aggaaaaaag tgatgacaac aattcttcta caactaaagg
     1801 acccatcaaa gattctatat acacatttgt gaaaattgca tattggtgtt tgggtgaaac
     1861 tcatgacaaa cgtccaacaa tggaggatgt cgttaaggag ctcaagaaag cattatcgtt
     1921 tcaaaagcaa gtacaatgcc aagattccga acaagatgtt gatggatatg ataattctgt
     1981 atcagtatcg gaatattcaa attatgcagc tgaaagtctt aaatgggaca atttgaagga
     2041 tgatatcttg aagcacctta aaattccact cagtgatatc ctagtggcaa cagataactt
     2101 ttccaatgaa tacctccatc ggtttcaagg tcaccataag ttgtaccaag caaaacttga
     2161 gcatggtcaa gaagattttt cttcggtaga agagaacaat aaaagcgaac tacccaagag
     2221 acatatcaac gtgttgatga aacgcctcat caccagagaa gagtaccgca aaagagatca
     2281 agaattattc tgtaacgaaa tccaaattct taccacttgt aatcatcata acatagtccc
     2341 tctacttgga ttttgtgatg aagattccga gatgatcctc atttttgata tcactatcaa
     2401 gatatacctt gatatgtatt taaacagcat ccacagacct attcttactt gggcagaacg
     2461 tttgagaata tgccttgata ttgcatatgg attggagtac ctacactatg agatggaaga
     2521 ccaaaagaag ataatacatc gtcatatgga tagctgcttt attgctttag atgagaattt
     2581 tagggcacaa attgccagtt ttgattactc tgtattcctt cctccatatc ttgatgacct
     2641 tactctttat caagataagg tttttggtat ccttggttac ggagatccag aatatctgaa
     2701 tacaggtaag ttaaaaagag aatcagatgt atatagtttt ggagtaattt tgtgcgaaat
     2761 tttatgggga aaaaccgcgg aatcacactt tgaggtgagt caaaaacagt tggcgtatga
     2821 aatacgaaga tgcatcgatg agggaacctt aaagaatatg gtagatcctc aaattaaaga
     2881 agaaagaagt gacgggttta ccctgaatag aggacccaac aaaaattctt tagttgcatt
     2941 tttggagatc gcagttgcgt gtttggtaga aactcaagac aaacgtccca caattaaagt
     3001 tgttatcgag gagctcaaca aagccttatt gtttcaagta aactacaaag acaccatcat
     3061 gatttcactt gaagacatac aagtagctac acaaaacttc catgataaaa attgtgttgg
     3121 cggaggaggg tttgggaaag tttataaagg aaaacttcca caaagtgata atacagttgt
     3181 tgcaaaacga ttggatacaa atggtagtca agcactgaat ttccttcatg ggggaaacaa
     3241 aacactagca acggttatac atagggacat caaacctgat aacattttgc taaccggtga
     3301 ctggaaagca aaacttggtg attttggact ttctttgaca agttcaataa ctaatgaaac
     3361 cgacttcgtc attgatcatg cgtgcgggac agaaggctac gtggatccac tttacatgaa
     3421 atctcgtttc ttaactaaag aatctgatat atattcgttc ggtgtagttt tatttgaaat
     3481 cttgtgtgga agatcaacgt tcgattgcaa aaaacaggat ggtgtgcatc tatcagtttt
     3541 cattaaagac agatttgaaa aaggaaaagg aaaacttgat gcaattgtat ttgagaaaat
     3601 aaaacaaaag atcatgcctg aagcattgag tgtatttcaa atgatagcct accagtgctt
     3661 aaatgagaac agcgaaaaac gaccagaagc aaaagaagtt gtgaaacaac ttaagaaggc
     3721 attggaattt caaatgtcga aagaggtgac agagcttctg gatactgcag gtcgtgttgt
     3781 gttaaaatat cgtactacag gttgttaatt tgaggctcta aatggttctg gactgtgagg
     3841 agctaaagtg taatagtttg atgattgttc gtggctaaaa tttcgagaca taaagtcaag
     3901 ggaccaaagt gcaagattgg tgttacaaat ataaatacca tttatccgtt gtggttgtga
     3961 atatgtttct catatttttc aaacacattt gttcatattc tctgttttag tttaaagttg
     4021 gaggtctaga ggttgatgat gttatctgtt attgctttct attactcttt tcatcacaaa
     4081 atcagtgtgt tgacctttgt tattctta
//
LOCUS       XM_071830534            1620 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitochondrial
            metalloendopeptidase OMA1 (LOC139840270), mRNA.
ACCESSION   XM_071830534
VERSION     XM_071830534.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1620
                     /gene="LOC139840270"
                     /note="mitochondrial metalloendopeptidase OMA1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139840270"
     CDS             178..1479
                     /gene="LOC139840270"
                     /codon_start=1
                     /product="mitochondrial metalloendopeptidase OMA1"
                     /protein_id="XP_071686635.1"
                     /db_xref="GeneID:139840270"
                     /translation="MAWYRRSKLGFDAISHYLTSPKTLIRNPPSIANQSSKFTNYPIS
                     RVPKVTSFSPLAVNKSSNSRFTGTSYRNYYVDSRGVKHFKRRGFKRWVDNPRNVLIVV
                     LVGSGIGVTIYFGNVEMVPYTKRKHLILMSKNVEKMIGESQFQSMKAGFKGKILPAMH
                     PESVRVRMISKDIIEALQRGLKKEQVWTDLNYASEGGGASESKGKETVMAMSEGPNEG
                     DMWMGKDEVIDDMWVDQSRKKGKEKGEKSDTRHLEGLKWEVLVVNDHLVNAFCLPGGK
                     IVVFTGLLEHFRTNEEIATIIGHEVAHAVARHSAEQITKNLWFTIGQLILYQFFMPDL
                     VNTMSSLLLKLPFSRRMEIEADYIGVLLMASAGYDPRAAPKVYEKLGQVAGDSALQNY
                     LSTHPSGKKRSKLLSEAKVMQEAVSIYREVIAGREVDGFFL"
     misc_feature    919..1404
                     /gene="LOC139840270"
                     /note="Peptidase M48C, integral membrane endopeptidase;
                     Region: M48C_Oma1_like; cd07331"
                     /db_xref="CDD:320690"
     misc_feature    order(1072..1077,1084..1086,1231..1233,1243..1245,
                     1363..1365)
                     /gene="LOC139840270"
                     /note="putative active site [active]"
                     /db_xref="CDD:320690"
     misc_feature    order(1072..1074,1084..1086,1231..1233,1363..1365)
                     /gene="LOC139840270"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:320690"
     polyA_site      1620
                     /gene="LOC139840270"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtaattgtc gttctgtaca cttgaggtgc cattttcatt tcttcagctt catctaaaat
       61 tccagattcc tctagaaata aactcgacct tcttgaatcc aacatctcgc cgttcttact
      121 tcatttaaca acaatttccc tttctttttt ttttctttcg ttcagaaatc tcttaaaatg
      181 gcatggtata gaagatcaaa actagggttt gacgcaattt cccattacct cacctccccc
      241 aaaaccctaa tcagaaatcc accatcaatt gctaatcaat caagtaagtt tacaaattac
      301 ccaatttcta gggttcctaa agttacttca ttttcacctc tagctgttaa caagagctca
      361 aattctaggt ttactggaac tagttacaga aattattatg ttgattcaag aggtgttaag
      421 cattttaaac gtcgagggtt taaaagatgg gttgataacc ctagaaatgt tttgattgta
      481 gtactagtag gatcaggaat tggtgttact atatattttg ggaatgttga aatggtacct
      541 tatactaaaa gaaagcatct cattttaatg tcgaaaaatg tggagaagat gataggtgag
      601 tctcagtttc agagcatgaa agctggattt aaaggaaaaa tattgcctgc aatgcatcct
      661 gaaagcgtta gggttagaat gatttcgaaa gatataatcg aggcgttgca acgagggttg
      721 aaaaaagagc aagtttggac cgatttgaat tatgcgtcgg agggtggggg cgcgtcggag
      781 agtaaaggga aggaaacggt gatggcgatg agtgaagggc ctaatgaagg tgatatgtgg
      841 atgggtaaag atgaggttat tgatgatatg tgggttgatc aaagtaggaa aaaggggaaa
      901 gaaaaagggg agaaatcgga tactaggcat ttagaagggt tgaaatggga agttttggtg
      961 gtgaatgatc atcttgtgaa tgcgttttgt ttgcctggtg ggaagattgt tgtgtttacg
     1021 gggttgttgg agcattttag aacgaacgaa gagattgcta ctataattgg gcatgaggtt
     1081 gcacatgcgg tggcaagaca ttcagctgag cagattacga agaacctttg gtttacaatc
     1141 ggacaactaa ttttatatca gttttttatg ccggatcttg taaacaccat gtcaagtctt
     1201 ctgcttaagc ttcctttttc ccgaagaatg gagattgaag ctgattacat aggggtgttg
     1261 ttgatggctt cagccggata tgatccacgt gctgcaccaa aggtatatga gaagttgggt
     1321 caagtagcgg gtgattctgc attgcaaaat tacctttcta cccatccatc tggtaagaag
     1381 cgaagtaaat tgctgtctga agctaaagtg atgcaagaag cagtctctat ctatcgagag
     1441 gtcatagcag gacgagaggt tgacgggttt ttcctataat aagtgatatt tacgccaaaa
     1501 tagttactac taccaacaag actattattg catcatgtat acacaagtgt aaaaatcact
     1561 ccccttttta tgatacttgc atgattttat tttatcaatg tttaatgtta cacttgtgtt
//
LOCUS       XM_071830535             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840271), mRNA.
ACCESSION   XM_071830535
VERSION     XM_071830535.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139840271"
                     /note="uncharacterized LOC139840271; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 37
                     Proteins"
                     /db_xref="GeneID:139840271"
     CDS             19..813
                     /gene="LOC139840271"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686636.1"
                     /db_xref="GeneID:139840271"
                     /translation="MVTGASSGLGWELCNDLAKYDCRIIAAARRTHNLKALCDKINNL
                     DQTEVRNNTNVRAVAVQLDVSADGPTIEACVKKAWDIFGRIDVLINNAGITGPLKSPL
                     DLPEEDWDQAFKTNVRGSWLVSKYVGLQMRVHNQGGSIINISSISGVNRCLQHGAVAY
                     ASSKASLDTMTKVMAMELGKHNIQVNSIAPGIFKSEITKEFFQKNWIKNVASKTIPLQ
                     EFVTTNPAVTSLVRYLIHSSSNYVTGNIFIVDGGCSLPGVPLYSSL"
     misc_feature    22..774
                     /gene="LOC139840271"
                     /note="NAD(P)-dependent dehydrogenase, short-chain alcohol
                     dehydrogenase family [Lipid transport and metabolism];
                     Region: FabG; COG1028"
                     /db_xref="CDD:440651"
ORIGIN      
        1 cttaaagaca aaattgtgat ggttactggt gcatcgtcgg gtcttggttg ggaattgtgt
       61 aacgacttag ccaaatatga ttgcaggatc attgcggctg cacgtcgaac acacaacctc
      121 aaggccttat gtgacaaaat taacaatttg gaccaaaccg aagtcaggaa caacactaac
      181 gttcgagcag ttgcagtgca acttgatgtt agcgccgatg gtcctactat tgaagcatgt
      241 gttaaaaagg cgtgggacat ttttggtcgt attgatgtgt tgattaacaa cgctggaatt
      301 acaggtcctc taaaaagtcc attggatttg cctgaagaag attgggatca agccttcaaa
      361 acaaatgtaa gaggatcatg gttagtgtcg aagtatgttg gccttcaaat gcgtgttcat
      421 aatcaaggag gatctataat caacatctct tctatttctg gtgttaatcg atgtcttcaa
      481 catggagctg ttgcatacgc ttcttcaaaa gcatccctag atactatgac aaaagtaatg
      541 gcaatggaac ttggaaaaca taatattcag gtgaactcaa tagctcctgg gatcttcaaa
      601 tctgagatca caaaggaatt cttccaaaaa aactggatta agaatgtggc ttcaaaaaca
      661 attccgttac aagagtttgt cacaactaac ccggccgtga cgtctttagt taggtactta
      721 atccatagtt catcaaatta tgtaacaggt aatattttca ttgtagatgg aggttgttcc
      781 ttaccaggtg taccacttta ttcatcactt tga
//
LOCUS       XR_011757310             742 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840272), transcript variant X1, ncRNA.
ACCESSION   XR_011757310
VERSION     XR_011757310.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..742
                     /gene="LOC139840272"
                     /note="uncharacterized LOC139840272; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840272"
     ncRNA           1..742
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840272"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840272"
ORIGIN      
        1 agatgttgat tgcgaattga attttatagt tgttacatgt tacatattgt tatacatctg
       61 ttgtaactgt tttcatataa ttcttgattt tgaattttga ttcgtttgct ttttgacgtt
      121 gatttgtttg attaattttg ttccactgct ggtccgttcc ttcatttggt tcaaaaattc
      181 tggaattagg gtttggaatg ggaagagaat tgataactga ttggcataaa tgcataatat
      241 tttggaaaca gatgctgcaa gaaacaaatt ggaagtcatg aagcaaaaga aacatacatt
      301 agaagctgaa gttaatgtat agtccagcag tcaagtgtgg attagctttt gcatttgtat
      361 taatgacaga gatgctttaa actctgctct tgatgagcaa atgggtgctg atcctaatgt
      421 ttttgtgatg ggcgaagaga tcaattgttc ttttaaagct aagaactttt taatctccat
      481 tgtgctcacc tttttttttc tttttttttt gtcaggttgg agaatacgaa ggtgcataca
      541 agatcaccaa gggattattg gacacataca atcttgaaag ggttgttgat accccaatca
      601 ctgaggtttg acagtgtttt ttttcccaat ttgagtggat actttaacct ttttttgagg
      661 ttctaaactt tgaattccca atttcgcttg ccaaatcgtt atattttttt gcagtcagag
      721 ttcatgaggt tcttatgaaa aa
//
LOCUS       XR_011757311             705 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840272), transcript variant X2, ncRNA.
ACCESSION   XR_011757311
VERSION     XR_011757311.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..705
                     /gene="LOC139840272"
                     /note="uncharacterized LOC139840272; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840272"
     ncRNA           1..705
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840272"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840272"
ORIGIN      
        1 agatgttgat tgcgaattga attttatagt tgttacatgt tacatattgt tatacatctg
       61 ttgtaactgt tttcatataa ttcttgattt tgaattttga ttcgtttgct ttttgacgtt
      121 gatttgtttg attaattttg ttccactgct ggtccgttcc ttcatttggt tcaaaaattc
      181 tggaattagg gtttggaatg ggaagagaat tgataactga ttggcataaa tgcataatat
      241 tttggaaaca gatgctgcaa gaaacaaatt ggaagtcatg aagcaaaaga aacatacatt
      301 agaagctgaa gttaatgtat agtccagcag tcaagtgtgg attagctttt gcatttgtat
      361 taatgacaga gatgctttaa actctgctct tgatgagcaa atgggtgctg atcctaatgt
      421 ttttgtgatg ggcgaagaga tcaattgttc ttttaaagct aagaactttt taatctccat
      481 tgtgctcacc tttttttttc tttttttttt gtcaggttgg agaatacgaa ggtgcataca
      541 agatcaccaa gggattattg gacacataca atcttgaaag ggttgttgat accccaatca
      601 ctgagtcaga gttcatgagg ttcttatgaa aaaaaaaaat gttattacat gatttttacc
      661 ttatttggtg gatttggttg cgatgtgtgt attcctcatg tatgg
//
LOCUS       XR_011757312            2035 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840272), transcript variant X3, ncRNA.
ACCESSION   XR_011757312
VERSION     XR_011757312.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2035
                     /gene="LOC139840272"
                     /note="uncharacterized LOC139840272; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840272"
     ncRNA           1..2035
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840272"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840272"
ORIGIN      
        1 tctaaactat ctttttccct atatatatac atttacctac actgcatcct acaacacaaa
       61 acccacttat gtgtatccat ttccatcgag acccaaccac atcacccaca atccaccact
      121 tcatcaccac acctccacct agctgcttca tgttttattt atgactcgat caaagttgtt
      181 gcaggctgct atacttatac gtttgttaca agccgctaca cttatgcatt tttctgttac
      241 agaaaaccac gagccacccc tcactcactc tctctctctc tctcacttat attttattta
      301 caaccgctgc aacaaaccac cccacaacaa ccgttaacac cacctatgat cttatttatt
      361 tatttattta ttttttcttt tcgttttcta ctttgatcaa acgaccaccc ttgatcacca
      421 taaacccatc accttcttgt tcaatcacca cccattcggt tgtttgcttg actgttgcta
      481 ctatacttac tgattcccaa tcataaacca ccctaggcgt cactatttca ccacccaaaa
      541 cagccataac cctctaatca agatgaactg ttgactgctg cagtatgtct tgcagtacgc
      601 tgctgctata actcttttgt ttacaatcga aaccatcacc aaaattcacc atctttgaat
      661 acccactact attcatcacc accttcgtga atcgctgcta ttttttgtta cttgtctcct
      721 atttctgttt taaccatcat cgacaccatc ttcattggtg ttactgatgt caacaacaat
      781 tacctcgagc atgttaatga tgaaaatgaa gaaaaaatga ttagataata ttggtatcac
      841 aaagaatgat gaagatgaca cgatttactg tacacggctg ctttattcta tttctatcga
      901 tttcacaaaa taccacataa ccacttgatt ctaacgggcc taatctaaat gggcttgtta
      961 cttaggtctt gattgtttat gggttgaaaa ggaaattggg ctttaaaaat tgtaattcct
     1021 ttggtttcaa gatcaatcac aatgataaca ataattataa ataacgatga taataacccg
     1081 atgggattat gatggcacag acgagaacat aaagtgataa gatgaggagg agaaataaag
     1141 attgatgatg atgatgatcg ggttaaacac ggtgagatga gaatgataaa tggactcatg
     1201 catattagaa attaaacgaa tgtgtattaa agaaaagaaa caacagagca ttggttaggg
     1261 tgtggtgggt taagtgagag gtcttgggtt ccggtccggg ctcgggcaat atttttttta
     1321 gaaaagaaga aggttgcaga agtaaaagtt aaacaattta agttgggtgt tatttcagaa
     1381 ttgaaacaca tagcgtaatg gttaaggatg ttatcgggtt agcgggacgt cgcgggttca
     1441 aacccggact tgggcatttt ttttaagggt tacttctttg agggtttgga atgggaagag
     1501 aattgataac tgattggcat aaatgcataa tattttggaa acagatgctg caagaaacaa
     1561 attggaagtc atgaagcaaa agaaacatac attagaagct gaagttaatg tatagtccag
     1621 cagtcaagtg tggattagct tttgcatttg tattaatgac agagatgctt taaactctgc
     1681 tcttgatgag caaatgggtg ctgatcctaa tgtttttgtg atgggcgaag agatcaattg
     1741 ttcttttaaa gctaagaact ttttaatctc cattgtgctc accttttttt ttcttttttt
     1801 tttgtcaggt tggagaatac gaaggtgcat acaagatcac caagggatta ttggacacat
     1861 acaatcttga aagggttgtt gataccccaa tcactgaggt ttgacagtgt tttttttccc
     1921 aatttgagtg gatactttaa cctttttttg aggttctaaa ctttgaattc ccaatttcgc
     1981 ttgccaaatc gttatatttt tttgcagtca gagttcatga ggttcttatg aaaaa
//
LOCUS       XM_071830536             628 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840273), mRNA.
ACCESSION   XM_071830536
VERSION     XM_071830536.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..628
                     /gene="LOC139840273"
                     /note="uncharacterized LOC139840273; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840273"
     CDS             191..496
                     /gene="LOC139840273"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686637.1"
                     /db_xref="GeneID:139840273"
                     /translation="MEDTSKASPEKEEEVIKKKYGGIVPKKPPLISKDHERAYFDSAD
                     WALGKQGVEKPKGPLEALRPKLQPTQQQTRYRKSPCAPTDGEDANATPTAEDTVMNE"
     misc_feature    197..430
                     /gene="LOC139840273"
                     /note="cAMP-regulated phosphoprotein/endosulfine conserved
                     region; Region: Endosulfine; pfam04667"
                     /db_xref="CDD:398375"
ORIGIN      
        1 aattaataat aaattaactt tttaataatt aaataataaa taaataaaac gagaattaat
       61 agagggcaaa tcttcttcaa ttattcaata cagtattttc attctcgatc gacggtaaat
      121 cggaaattag cttcaacctt ttccagcagc tttttattca tcgcttgtgc acacttgcta
      181 gtgtaaaaaa atggaggaca catctaaggc ttcaccagag aaggaggagg aagtcatcaa
      241 gaagaagtat ggaggtattg tgccaaaaaa gcccccactc atttctaagg atcatgaacg
      301 agcttatttt gattcagctg attgggcttt gggaaagcaa ggtgtagaga agcccaaagg
      361 acctcttgag gcacttcgcc ctaaactaca accaactcaa cagcaaacgc gatatcggaa
      421 atctccttgt gcacctacag atggagaaga tgcgaacgct acaccaacag cagaggacac
      481 agtcatgaat gaatgagaaa gtgttgctcc tcattaatga tctcatgatg cttcttgttt
      541 aattgtcttt tttttttttt ttttttttca tgaaacaata catacctgtg ttgcaaacat
      601 aatatgatac aagtatgcag attaattg
//
LOCUS       XM_071830537            1418 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable LRR receptor-like
            serine/threonine-protein kinase RPK1 (LOC139840274), mRNA.
ACCESSION   XM_071830537
VERSION     XM_071830537.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1418
                     /gene="LOC139840274"
                     /note="probable LRR receptor-like serine/threonine-protein
                     kinase RPK1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840274"
     CDS             141..1325
                     /gene="LOC139840274"
                     /codon_start=1
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase RPK1"
                     /protein_id="XP_071686638.1"
                     /db_xref="GeneID:139840274"
                     /translation="MGLFALFNLLPVSTVSGHIELPQQSRRMLVDSGSKDGNKTGFSS
                     FELILIIVVSLIVLILIALIVVYFCFRKLKRNSSRVNGVPSPRRSGTERLVIFRELGV
                     PLTFDSVIQATGNFTMKYCIGSGGFGSTYRAEINPGTTVAVKRLTVEMCQGVPQFNAE
                     IRSLGRIKHPNLITLIGYCASESEMLLVYNYISGGSLEDFIRLNKNRVTGVKVVTKIA
                     AEVAGALAFLHDDCSPRILHRDVKPSNILLDNNYNAYLSDFGLSRLLEGFETHVTTGV
                     AGTFGYVAPEYALACRASYKADVYSYGVMLLELISDKRALDMSFSGQENGFTIVTWAT
                     MLWEEGRMDEVFADGLWASGPENVLPELLQLGLSCTMESAPKRPTMRQVVRKLRQIQC
                     CF"
     misc_feature    504..1310
                     /gene="LOC139840274"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(504..518,528..530,564..566,570..572,657..659,
                     705..716,726..728,732..734,858..860,864..866,870..875,
                     879..881,912..914,921..923,972..983)
                     /gene="LOC139840274"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(504..518,528..530,564..566,570..572,657..659,
                     705..716,726..728,858..860,864..866,870..875,879..881,
                     912..914)
                     /gene="LOC139840274"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(516..518,726..728,732..734,858..860,864..866,
                     870..872,921..923,972..983)
                     /gene="LOC139840274"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(909..932,960..983)
                     /gene="LOC139840274"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
     polyA_site      1418
                     /gene="LOC139840274"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actcctgtaa atgcaaattt aaacgcgtga agaaatcaaa cattcaaatc catgtaagcc
       61 cgttttcaaa aactttcaat ttcgaacaaa aaaagtcttg attttgaatt ctgggtatca
      121 attttctcgg gtgaaaactg atgggtttat ttgcgttgtt caatctttta cccgtttcta
      181 cggtttcggg tcatatcgaa ttaccgcaac aatcacggcg gatgcttgtt gattcggggt
      241 cgaaagatgg gaataaaact ggtttcagct catttgaatt gatattaatt atagttgtat
      301 cactaattgt tttaattctt atagctttga tcgttgttta cttttgtttt cgaaaactta
      361 aacggaattc atcacgagtt aacggagttc cgtcaccacg tcgttcgggc accgaacgtc
      421 tcgtgatctt tagagagctc ggtgtaccgt taacttttga ctccgttatt caagctaccg
      481 gaaacttcac tatgaaatat tgtattggta gtggcggttt cgggtcaact tatcgggcag
      541 aaataaatcc gggcacgaca gttgccgtga aacggctgac cgtagaaatg tgtcaagggg
      601 tcccacaatt caatgcagaa attcgtagtt taggccgaat taaacatccg aatcttataa
      661 cattgatcgg atattgtgct agtgaatcag aaatgttatt agtttataat tatatttctg
      721 gtggtagttt ggaggatttt attaggttaa acaaaaatcg agttaccggg gtgaaagtag
      781 ttactaaaat tgctgctgaa gtggcaggcg cgttggcatt tttacacgac gattgtagtc
      841 cacgtatact tcatcgagac gttaagccga gtaatatctt actagataat aattataatg
      901 cttatttgtc ggattttggg ttgtcacgct tgctcgaggg gttcgagaca cacgtgacaa
      961 ccggggttgc ggggacattt ggttatgtgg cgcccgaata tgctttagca tgtagggcgt
     1021 cgtataaggc agatgtgtat agttatgggg tgatgttact tgaattgata tcagataagc
     1081 gggctttgga catgtctttt tcgggtcaag agaatggttt tacgattgtg acgtgggcga
     1141 ctatgctatg ggaagagggg cggatggatg aggtgtttgc ggatggattg tgggcctcgg
     1201 ggccggaaaa tgtgttgccg gagttgttac aattgggatt gagttgtacg atggaatcgg
     1261 ctcccaaaag gcctaccatg aggcaagttg taagaaaatt gaggcaaata caatgttgtt
     1321 tttgattgtt gactttgtca aatgtatagt ttgatttttt ttcaaggtaa cgaaatgtat
     1381 ggttcaagtt gtccattatg ttatctactt tttatgtt
//
LOCUS       XR_011757313             347 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840275), ncRNA.
ACCESSION   XR_011757313
VERSION     XR_011757313.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..347
                     /gene="LOC139840275"
                     /note="uncharacterized LOC139840275; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840275"
     ncRNA           1..347
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840275"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840275"
ORIGIN      
        1 tatatcttct ttcactctcc aatttccttt tcaattttag ttttaatatt ttaatttcta
       61 agttctaagt agtagtaagt ggtgtaattc aaggttatgg gtattgtagt aatgcttttc
      121 tatcattcca aatcattgag aaaaaaagaa agagaaggtt cagtgattag acagctggac
      181 atcttctcat ttgctggtaa tcggttgtag ctttgtagat attgctttgg gagacgacgg
      241 gcatgataat gttatgtttg acagtgttta actctgatgg agtcttttat catatgaacc
      301 gtgttctttt gtaaaccgaa tgtaattacg tctcttccat ttaaaac
//
LOCUS       XR_011757314            2657 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840276), transcript variant X1, ncRNA.
ACCESSION   XR_011757314
VERSION     XR_011757314.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2657
                     /gene="LOC139840276"
                     /note="uncharacterized LOC139840276; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840276"
     ncRNA           1..2657
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840276"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840276"
ORIGIN      
        1 cacgatccca tattttttcc attcgccacg tgtcttgatt ttctattttt tttttttttt
       61 caacaccaac taaaattaag gattttcctc cgttccacat taattttcat cgatccctct
      121 ccatatggtt ttgaatcagt gggtatcaca attacgtctt ctacgcatcc aaaattagag
      181 ttgcacaatt aggtcttcag atgcgattga taaaacacat cggtttcaag aactctctgg
      241 gattactatt catcatcaat catcaatttg aatgaaacga ttacgcgatg acgaccagcg
      301 aaatcacttt aagggtcttt cagttttgat ctggttttgt tatcattcga ttttagagaa
      361 acaaattggc attttgtaca ctcatgatca ggagcttctc cctagaataa gaaccaagaa
      421 tctataaagg taaagttaaa agtgtgttgg gtgatataat gtgaatatgt aattgttatg
      481 gagtgtttta atgctcgcta aatcctaatt ttagtttctc ctttttccat tattgtccca
      541 atttattaac ccagattgat tgatattttg tttgatttat attatctttt tttgcatttc
      601 gtttatgatt tgatggacac ggtatggatg catatatcat aagcagaggc ttaggatgta
      661 tgccagattt aaaggatatt aaggaaccag tggccaataa gttaaagctt agacattttc
      721 acacatacaa taatagctta aaatagctaa ctgtacccat gtcttttggt actagactgg
      781 gagctttggt ctcttgaaaa catcttgaca aataagcact tgcagttgaa gtaattggta
      841 accgttgttg tacattcaat gatgaagtca tacttcacac acaataaatg gaccttcgaa
      901 taagtatgat caagaagcaa gtataccgac tgataagtgg aacggaggga gcgaatacta
      961 tattttgtgc ttctacaagg accacctttt cacctgcaaa ggaaagatcc taaagataga
     1021 ggaccggacg tgcaacaaga atatggatga catcagaaac ggcataggtt acgttaacca
     1081 cgggagacaa gacgatagtt atagggtata tatacaaaca ccttctaaca atagcttaaa
     1141 aaaagttgca ggtactgttt caaagtcatc ttccaggatg actctagaga agccagattt
     1201 accttcttcg aagaatcagg ccaaccatgc caaacattga tatcacagat tgaaccaaac
     1261 aaacgcaacg atctatcatc aaatatatat gcgtgtgtaa taagaaggct gttattcatg
     1321 attcttctaa tggttcggtg gagaagacgg ccgagcaaac tgaaagctta tcaggtgacc
     1381 attgcatcct tgtgagaata ctcagacaca catatacata cccattagat attaaatcaa
     1441 gggttttatt gtacttttta aagcttcgaa cctacattct ctggtatgag aaataagcag
     1501 gttggtaatg ggttttgtag ttcatcgcag attgcttaaa taaacttagg gtgtgcgccc
     1561 ttccacatga aaatgaataa gatactggtc aaactgtcag ggacctctaa gtaattcaaa
     1621 aaagttatta ttgacatgaa cttcaacaat ataatgattc atatcctaat tcatacagat
     1681 aaattagcta acattgttct gtgagtttga agttcaaata tatataggta tttgaagttt
     1741 tttctaacaa tgataatggc tttacttcgt ttggttctat aatgttaaac tgaagatgtg
     1801 gacccaagcg taggcttgat gggatcaatt ccttgcgacc agttgacgag tttaacatat
     1861 ttcgttgcca aattcattca aagtggtgaa tcctacacta attattatat ggtgtacgtt
     1921 tacaagaaca aaaaggtagg ctgttatgtt ttcctcgcga gtgatgataa atcggctttt
     1981 gcaacagtag ctttccataa tcggcattat gatctgcctc cttggtctgt tgatgtaaaa
     2041 cccgataaaa cagaagatta ttgaggttag agtcgatcgc gaatggtttt ccctgcaaca
     2101 attcaggttt gtgagtttta cagcagccat gaagatatgt ttaatgcgtg aaatatacca
     2161 atttataata aagtataaga taacatgaaa attatgaaat ggtgataaca ggttcagttt
     2221 ttgaagtgag atttgatgct tatacgattc cgttagtaca gatgtatagt taacttgatt
     2281 atgctgatta tgctcgtgta attagtattg aagtagtttt gttttataaa caataagaat
     2341 tgtatccttt ttctgtactt agttggcgtt cttgcttaga acttatcagt taatctcaag
     2401 tttatatcac ttgatactgc ttatatcgtt tatccaacag accaagtttg tattttggta
     2461 cactcgacgc acacctggag tccggactca gacatcatat gaagacaata taaaacatat
     2521 aatggacttt agcatggtcg aaggttttta ccactatgta catcttaaaa atttgagttg
     2581 ctaaatgggg gagtcaaagg catgtcgggt agaatcagtt aggggtgttc ttcggtttgg
     2641 ttttccattt attcggt
//
LOCUS       XR_011757315            2311 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840276), transcript variant X2, ncRNA.
ACCESSION   XR_011757315
VERSION     XR_011757315.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2311
                     /gene="LOC139840276"
                     /note="uncharacterized LOC139840276; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840276"
     ncRNA           1..2311
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840276"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840276"
ORIGIN      
        1 cacgatccca tattttttcc attcgccacg tgtcttgatt ttctattttt tttttttttt
       61 caacaccaac taaaattaag gattttcctc cgttccacat taattttcat cgatccctct
      121 ccatatggtt ttgaatcagt gggtatcaca attacgtctt ctacgcatcc aaaattagag
      181 ttgcacaatt aggtcttcag atgcgattga taaaacacat cggtttcaag aactctctgg
      241 gattactatt catcatcaat catcaatttg aatgaaacga ttacgcgatg acgaccagcg
      301 aaatcacttt aagggtcttt cagttttgat ctggttttgt tatcattcga ttttagagaa
      361 acaaattggc attttgtaca ctcatgatca ggagcttctc cctagaataa gaaccaagaa
      421 tctataaaga ctgggagctt tggtctcttg aaaacatctt gacaaataag cacttgcagt
      481 tgaagtaatt ggtaaccgtt gttgtacatt caatgatgaa gtcatacttc acacacaata
      541 aatggacctt cgaataagta tgatcaagaa gcaagtatac cgactgataa gtggaacgga
      601 gggagcgaat actatatttt gtgcttctac aaggaccacc ttttcacctg caaaggaaag
      661 atcctaaaga tagaggaccg gacgtgcaac aagaatatgg atgacatcag aaacggcata
      721 ggttacgtta accacgggag acaagacgat agttataggg tatatataca aacaccttct
      781 aacaatagct taaaaaaagt tgcaggtact gtttcaaagt catcttccag gatgactcta
      841 gagaagccag atttaccttc ttcgaagaat caggccaacc atgccaaaca ttgatatcac
      901 agattgaacc aaacaaacgc aacgatctat catcaaatat atatgcgtgt gtaataagaa
      961 ggctgttatt catgattctt ctaatggttc ggtggagaag acggccgagc aaactgaaag
     1021 cttatcaggt gaccattgca tccttgtgag aatactcaga cacacatata catacccatt
     1081 agatattaaa tcaagggttt tattgtactt tttaaagctt cgaacctaca ttctctggta
     1141 tgagaaataa gcaggttggt aatgggtttt gtagttcatc gcagattgct taaataaact
     1201 tagggtgtgc gcccttccac atgaaaatga ataagatact ggtcaaactg tcagggacct
     1261 ctaagtaatt caaaaaagtt attattgaca tgaacttcaa caatataatg attcatatcc
     1321 taattcatac agataaatta gctaacattg ttctgtgagt ttgaagttca aatatatata
     1381 ggtatttgaa gttttttcta acaatgataa tggctttact tcgtttggtt ctataatgtt
     1441 aaactgaaga tgtggaccca agcgtaggct tgatgggatc aattccttgc gaccagttga
     1501 cgagtttaac atatttcgtt gccaaattca ttcaaagtgg tgaatcctac actaattatt
     1561 atatggtgta cgtttacaag aacaaaaagg taggctgtta tgttttcctc gcgagtgatg
     1621 ataaatcggc ttttgcaaca gtagctttcc ataatcggca ttatgatctg cctccttggt
     1681 ctgttgatgt aaaacccgat aaaacagaag attattgagg ttagagtcga tcgcgaatgg
     1741 ttttccctgc aacaattcag gtttgtgagt tttacagcag ccatgaagat atgtttaatg
     1801 cgtgaaatat accaatttat aataaagtat aagataacat gaaaattatg aaatggtgat
     1861 aacaggttca gtttttgaag tgagatttga tgcttatacg attccgttag tacagatgta
     1921 tagttaactt gattatgctg attatgctcg tgtaattagt attgaagtag ttttgtttta
     1981 taaacaataa gaattgtatc ctttttctgt acttagttgg cgttcttgct tagaacttat
     2041 cagttaatct caagtttata tcacttgata ctgcttatat cgtttatcca acagaccaag
     2101 tttgtatttt ggtacactcg acgcacacct ggagtccgga ctcagacatc atatgaagac
     2161 aatataaaac atataatgga ctttagcatg gtcgaaggtt tttaccacta tgtacatctt
     2221 aaaaatttga gttgctaaat gggggagtca aaggcatgtc gggtagaatc agttaggggt
     2281 gttcttcggt ttggttttcc atttattcgg t
//
LOCUS       XR_011757316            2238 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840276), transcript variant X3, ncRNA.
ACCESSION   XR_011757316
VERSION     XR_011757316.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2238
                     /gene="LOC139840276"
                     /note="uncharacterized LOC139840276; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840276"
     ncRNA           1..2238
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840276"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840276"
ORIGIN      
        1 cacgatccca tattttttcc attcgccacg tgtcttgatt ttctattttt tttttttttt
       61 caacaccaac taaaattaag gattttcctc cgttccacat taattttcat cgatccctct
      121 ccatatggtt ttgaatcagt gggtatcaca attacgtctt ctacgcatcc aaaattagag
      181 ttgcacaatt aggtcttcag atgcgattga taaaacacat cggtttcaag aactctctgg
      241 gattactatt catcatcaat catcaatttg aatgaaacga ttacgcgatg acgaccagcg
      301 aaatcacttt aagggtcttt cagttttgat ctggttttgt tatcattcga ttttagactg
      361 ggagctttgg tctcttgaaa acatcttgac aaataagcac ttgcagttga agtaattggt
      421 aaccgttgtt gtacattcaa tgatgaagtc atacttcaca cacaataaat ggaccttcga
      481 ataagtatga tcaagaagca agtataccga ctgataagtg gaacggaggg agcgaatact
      541 atattttgtg cttctacaag gaccaccttt tcacctgcaa aggaaagatc ctaaagatag
      601 aggaccggac gtgcaacaag aatatggatg acatcagaaa cggcataggt tacgttaacc
      661 acgggagaca agacgatagt tatagggtat atatacaaac accttctaac aatagcttaa
      721 aaaaagttgc aggtactgtt tcaaagtcat cttccaggat gactctagag aagccagatt
      781 taccttcttc gaagaatcag gccaaccatg ccaaacattg atatcacaga ttgaaccaaa
      841 caaacgcaac gatctatcat caaatatata tgcgtgtgta ataagaaggc tgttattcat
      901 gattcttcta atggttcggt ggagaagacg gccgagcaaa ctgaaagctt atcaggtgac
      961 cattgcatcc ttgtgagaat actcagacac acatatacat acccattaga tattaaatca
     1021 agggttttat tgtacttttt aaagcttcga acctacattc tctggtatga gaaataagca
     1081 ggttggtaat gggttttgta gttcatcgca gattgcttaa ataaacttag ggtgtgcgcc
     1141 cttccacatg aaaatgaata agatactggt caaactgtca gggacctcta agtaattcaa
     1201 aaaagttatt attgacatga acttcaacaa tataatgatt catatcctaa ttcatacaga
     1261 taaattagct aacattgttc tgtgagtttg aagttcaaat atatataggt atttgaagtt
     1321 ttttctaaca atgataatgg ctttacttcg tttggttcta taatgttaaa ctgaagatgt
     1381 ggacccaagc gtaggcttga tgggatcaat tccttgcgac cagttgacga gtttaacata
     1441 tttcgttgcc aaattcattc aaagtggtga atcctacact aattattata tggtgtacgt
     1501 ttacaagaac aaaaaggtag gctgttatgt tttcctcgcg agtgatgata aatcggcttt
     1561 tgcaacagta gctttccata atcggcatta tgatctgcct ccttggtctg ttgatgtaaa
     1621 acccgataaa acagaagatt attgaggtta gagtcgatcg cgaatggttt tccctgcaac
     1681 aattcaggtt tgtgagtttt acagcagcca tgaagatatg tttaatgcgt gaaatatacc
     1741 aatttataat aaagtataag ataacatgaa aattatgaaa tggtgataac aggttcagtt
     1801 tttgaagtga gatttgatgc ttatacgatt ccgttagtac agatgtatag ttaacttgat
     1861 tatgctgatt atgctcgtgt aattagtatt gaagtagttt tgttttataa acaataagaa
     1921 ttgtatcctt tttctgtact tagttggcgt tcttgcttag aacttatcag ttaatctcaa
     1981 gtttatatca cttgatactg cttatatcgt ttatccaaca gaccaagttt gtattttggt
     2041 acactcgacg cacacctgga gtccggactc agacatcata tgaagacaat ataaaacata
     2101 taatggactt tagcatggtc gaaggttttt accactatgt acatcttaaa aatttgagtt
     2161 gctaaatggg ggagtcaaag gcatgtcggg tagaatcagt taggggtgtt cttcggtttg
     2221 gttttccatt tattcggt
//
LOCUS       XR_011757317            2653 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840276), transcript variant X4, ncRNA.
ACCESSION   XR_011757317
VERSION     XR_011757317.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2653
                     /gene="LOC139840276"
                     /note="uncharacterized LOC139840276; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840276"
     ncRNA           1..2653
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840276"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840276"
ORIGIN      
        1 cacgatccca tattttttcc attcgccacg tgtcttgatt ttctattttt tttttttttt
       61 caacaccaac taaaattaag gattttcctc cgttccacat taattttcat cgatccctct
      121 ccatatggtt ttgaatcagt gggtatcaca attacgtctt ctacgcatcc aaaattagag
      181 ttgcacaatt aggtcttcag atgcgattga taaaacacat cggtttcaag aactctctgg
      241 gattactatt catcatcaat catcaatttg aatgaaacga ttacgcgatg acgaccagcg
      301 aaatcacttt aagggtcttt cagttttgat ctggttttgt tatcattcga ttttagagaa
      361 acaaattggc attttgtaca ctcatgatca ggagcttctc cctagaataa gaaccaagaa
      421 tctataaagg taaagttaaa agtgtgttgg gtgatataat gtgaatatgt aattgttatg
      481 gagtgtttta atgctcgcta aatcctaatt ttagtttctc ctttttccat tattgtccca
      541 atttattaac ccagattgat tgatattttg tttgatttat attatctttt tttgcatttc
      601 gtttatgatt tgatggacac ggtatggatg catatatcat aagcagaggc ttaggatgta
      661 tgccagattt aaaggatatt aaggaaccag tggccaataa gttaaagctt agacattttc
      721 acacatacaa taatagctta aaatagctaa ctgtacccat gtcttttggt actagactgg
      781 gagctttggt ctcttgaaaa catcttgaca aataagcact tgcagttgaa gtaattggta
      841 accgttgttg tacattcaat gatgaagtca tacttcacac acaataaatg gaccttcgaa
      901 taagtatgat caagaagcaa gtataccgac tgataagtgg aacggaggga gcgaatacta
      961 tattttgtgc ttctacaagg accacctttt cacctgcaaa ggaaagatcc taaagataga
     1021 ggaccggacg tgcaacaaga atatggatga catcagaaac ggcataggtt acgttaacca
     1081 cgggagacaa gacgatagtt atagggtata tatacaaaca ccttctaaca atagcttaaa
     1141 aaaagttgca ggtactgttt caaagtcatc ttccaggatg actctagaga agccagattt
     1201 accttcttcg aagaatcagg ccaaccatgc caaacattga tatcacagat tgaaccaaac
     1261 aaacgcaacg atctatcatc aaatatatat gcgtgtgtaa taagaaggct gttattcatg
     1321 attcttctaa tggttcggtg gagaagacgg ccgagcaaac tgaaagctta tcaggtgacc
     1381 attgcatcct tgtgagaata ctcagacaca catatacata cccattagat attaaatcaa
     1441 gggttttatt gtacttttta aagcttcgaa cctacattct ctggtatgag aaataagcag
     1501 gttggtaatg ggttttgtag ttcatcgcag attgcttaaa taaacttagg gtgtgcgccc
     1561 ttccacatga aaatgaataa gatactggtc aaactgtcag ggacctctaa gtaattcaaa
     1621 aaagttatta ttgacatgaa cttcaacaat ataatgattc atatcctaat tcatacagat
     1681 aaattagcta acattgttct gtgagtttga agttcaaata tatataggta tttgaagttt
     1741 tttctaacaa tgataatggc tttacttcgt ttggttctat aatgttaaac tgaagatgtg
     1801 gacccaagcg taggcttgat gggatcaatt ccttgcgacc agttgacgag tttaacatat
     1861 ttcgttgcca aattcattca aagtggtgaa tcctacacta attattatat ggtgtacgtt
     1921 tacaagaaca aaaaggtagg ctgttatgtt ttcctcgcga gtgatgataa atcggctttt
     1981 gcaacagtag ctttccataa tcggcattat gatctgcctc cttggttgat gtaaaacccg
     2041 ataaaacaga agattattga ggttagagtc gatcgcgaat ggttttccct gcaacaattc
     2101 aggtttgtga gttttacagc agccatgaag atatgtttaa tgcgtgaaat ataccaattt
     2161 ataataaagt ataagataac atgaaaatta tgaaatggtg ataacaggtt cagtttttga
     2221 agtgagattt gatgcttata cgattccgtt agtacagatg tatagttaac ttgattatgc
     2281 tgattatgct cgtgtaatta gtattgaagt agttttgttt tataaacaat aagaattgta
     2341 tcctttttct gtacttagtt ggcgttcttg cttagaactt atcagttaat ctcaagttta
     2401 tatcacttga tactgcttat atcgtttatc caacagacca agtttgtatt ttggtacact
     2461 cgacgcacac ctggagtccg gactcagaca tcatatgaag acaatataaa acatataatg
     2521 gactttagca tggtcgaagg tttttaccac tatgtacatc ttaaaaattt gagttgctaa
     2581 atgggggagt caaaggcatg tcgggtagaa tcagttaggg gtgttcttcg gtttggtttt
     2641 ccatttattc ggt
//
LOCUS       XR_011757318            2304 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840276), transcript variant X5, ncRNA.
ACCESSION   XR_011757318
VERSION     XR_011757318.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2304
                     /gene="LOC139840276"
                     /note="uncharacterized LOC139840276; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840276"
     ncRNA           1..2304
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840276"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840276"
ORIGIN      
        1 cacgatccca tattttttcc attcgccacg tgtcttgatt ttctattttt tttttttttt
       61 caacaccaac taaaattaag gattttcctc cgttccacat taattttcat cgatccctct
      121 ccatatggtt ttgaatcagt gggtatcaca attacgtctt ctacgcatcc aaaattagag
      181 ttgcacaatt aggtcttcag atgcgattga taaaacacat cggtttcaag aactctctgg
      241 gattactatt catcatcaat catcaatttg aatgaaacga ttacgcgatg acgaccagcg
      301 aaatcacttt aagggtcttt cagttttgat ctggttttgt tatcattcga ttttagagaa
      361 acaaattggc attttgtaca ctcatgatca ggagcttctc cctagaataa gaaccaagaa
      421 tctataaagg taaagttaaa agtgtgttgg gtgatataat gtgaatatgt aattgttatg
      481 gagtgtttta atgctcgcta aatcctaatt ttagtttctc ctttttccat tattgtccca
      541 atttattaac ccagattgat tgatattttg tttgatttat attatctttt tttgcatttc
      601 gtttatgatt tgatggacac ggtatggatg catatatcat aagcagaggc ttaggatgta
      661 tgccagattt aaaggatatt aaggaaccag tggccaataa gttaaagctt agacattttc
      721 acacatacaa taatagctta aaatagctaa ctgtacccat gtcttttggt actagactgg
      781 gagctttggt ctcttgaaaa catcttgaca aataagcact tgcagttgaa gtaattggta
      841 accgttgttg tacattcaat gatgaagtca tacttcacac acaataaatg gaccttcgaa
      901 taagtatgat caagaagcaa gtataccgac tgataagtgg aacggaggga gcgaatacta
      961 tattttgtgc ttctacaagg accacctttt cacctgcaaa ggaaagatcc taaagataga
     1021 ggaccggacg tgcaacaaga atatggatga catcagaaac ggcataggtt acgttaacca
     1081 cgggagacaa gacgatagtt atagggtata tatacaaaca ccttctaaca atagcttaaa
     1141 aaaagttgca ggtactgttt caaagtcatc ttccaggatg actctagaga agccagattt
     1201 accttcttcg aagaatcagg ccaaccatgc caaacattga tatcacagat tgaaccaaac
     1261 aaacgcaacg atctatcatc aaatatatat gcgtgtgtaa taagaaggct gttattcatg
     1321 attcttctaa tggttcggtg gagaagacgg ccgagcaaac tgaaagctta tcaggtattt
     1381 gaagtttttt ctaacaatga taatggcttt acttcgtttg gttctataat gttaaactga
     1441 agatgtggac ccaagcgtag gcttgatggg atcaattcct tgcgaccagt tgacgagttt
     1501 aacatatttc gttgccaaat tcattcaaag tggtgaatcc tacactaatt attatatggt
     1561 gtacgtttac aagaacaaaa aggtaggctg ttatgttttc ctcgcgagtg atgataaatc
     1621 ggcttttgca acagtagctt tccataatcg gcattatgat ctgcctcctt ggtctgttga
     1681 tgtaaaaccc gataaaacag aagattattg aggttagagt cgatcgcgaa tggttttccc
     1741 tgcaacaatt caggtttgtg agttttacag cagccatgaa gatatgttta atgcgtgaaa
     1801 tataccaatt tataataaag tataagataa catgaaaatt atgaaatggt gataacaggt
     1861 tcagtttttg aagtgagatt tgatgcttat acgattccgt tagtacagat gtatagttaa
     1921 cttgattatg ctgattatgc tcgtgtaatt agtattgaag tagttttgtt ttataaacaa
     1981 taagaattgt atcctttttc tgtacttagt tggcgttctt gcttagaact tatcagttaa
     2041 tctcaagttt atatcacttg atactgctta tatcgtttat ccaacagacc aagtttgtat
     2101 tttggtacac tcgacgcaca cctggagtcc ggactcagac atcatatgaa gacaatataa
     2161 aacatataat ggactttagc atggtcgaag gtttttacca ctatgtacat cttaaaaatt
     2221 tgagttgcta aatgggggag tcaaaggcat gtcgggtaga atcagttagg ggtgttcttc
     2281 ggtttggttt tccatttatt cggt
//
LOCUS       XR_011757319            2573 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840276), transcript variant X6, ncRNA.
ACCESSION   XR_011757319
VERSION     XR_011757319.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2573
                     /gene="LOC139840276"
                     /note="uncharacterized LOC139840276; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840276"
     ncRNA           1..2573
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840276"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139840276"
ORIGIN      
        1 cacgatccca tattttttcc attcgccacg tgtcttgatt ttctattttt tttttttttt
       61 caacaccaac taaaattaag gattttcctc cgttccacat taattttcat cgatccctct
      121 ccatatggtt ttgaatcagt gggtatcaca attacgtctt ctacgcatcc aaaattagag
      181 ttgcacaatt aggtcttcag atgcgattga taaaacacat cggtttcaag aactctctgg
      241 gattactatt catcatcaat catcaatttg aatgaaacga ttacgcgatg acgaccagcg
      301 aaatcacttt aagggtcttt cagttttgat ctggttttgt tatcattcga ttttagagaa
      361 acaaattggc attttgtaca ctcatgatca ggagcttctc cctagaataa gaaccaagaa
      421 tctataaagg taaagttaaa agtgtgttgg gtgatataat gtgaatatgt aattgttatg
      481 gagtgtttta atgctcgcta aatcctaatt ttagtttctc ctttttccat tattgtccca
      541 atttattaac ccagattgat tgatattttg tttgatttat attatctttt tttgcatttc
      601 gtttatgatt tgatggacac ggtatggatg catatatcat aagcagaggc ttaggatgta
      661 tgccagattt aaaggatatt aaggaaccag tggccaataa gttaaagctt agacattttc
      721 acacatacaa taatagctta aaatagctaa ctgtacccat gtcttttggt actagactgg
      781 gagctttggt ctcttgaaaa catcttgaca aataagcact tgcagttgaa gtaattggta
      841 accgttgttg tacattcaat gatgaagtca tacttcacac acaataaatg gaccttcgaa
      901 taagtatgat caagaagcaa gtataccgac tgataagtgg aacggaggga gcgaatacta
      961 tattttgtgc ttctacaagg accacctttt cacctgcaaa ggaaagatcc taaagataga
     1021 ggaccggacg tgcaacaaga atatggatga catcagaaac ggcataggta ctgtttcaaa
     1081 gtcatcttcc aggatgactc tagagaagcc agatttacct tcttcgaaga atcaggccaa
     1141 ccatgccaaa cattgatatc acagattgaa ccaaacaaac gcaacgatct atcatcaaat
     1201 atatatgcgt gtgtaataag aaggctgtta ttcatgattc ttctaatggt tcggtggaga
     1261 agacggccga gcaaactgaa agcttatcag gtgaccattg catccttgtg agaatactca
     1321 gacacacata tacataccca ttagatatta aatcaagggt tttattgtac tttttaaagc
     1381 ttcgaaccta cattctctgg tatgagaaat aagcaggttg gtaatgggtt ttgtagttca
     1441 tcgcagattg cttaaataaa cttagggtgt gcgcccttcc acatgaaaat gaataagata
     1501 ctggtcaaac tgtcagggac ctctaagtaa ttcaaaaaag ttattattga catgaacttc
     1561 aacaatataa tgattcatat cctaattcat acagataaat tagctaacat tgttctgtga
     1621 gtttgaagtt caaatatata taggtatttg aagttttttc taacaatgat aatggcttta
     1681 cttcgtttgg ttctataatg ttaaactgaa gatgtggacc caagcgtagg cttgatggga
     1741 tcaattcctt gcgaccagtt gacgagttta acatatttcg ttgccaaatt cattcaaagt
     1801 ggtgaatcct acactaatta ttatatggtg tacgtttaca agaacaaaaa ggtaggctgt
     1861 tatgttttcc tcgcgagtga tgataaatcg gcttttgcaa cagtagcttt ccataatcgg
     1921 cattatgatc tgcctccttg gtctgttgat gtaaaacccg ataaaacaga agattattga
     1981 ggttagagtc gatcgcgaat ggttttccct gcaacaattc aggtttgtga gttttacagc
     2041 agccatgaag atatgtttaa tgcgtgaaat ataccaattt ataataaagt ataagataac
     2101 atgaaaatta tgaaatggtg ataacaggtt cagtttttga agtgagattt gatgcttata
     2161 cgattccgtt agtacagatg tatagttaac ttgattatgc tgattatgct cgtgtaatta
     2221 gtattgaagt agttttgttt tataaacaat aagaattgta tcctttttct gtacttagtt
     2281 ggcgttcttg cttagaactt atcagttaat ctcaagttta tatcacttga tactgcttat
     2341 atcgtttatc caacagacca agtttgtatt ttggtacact cgacgcacac ctggagtccg
     2401 gactcagaca tcatatgaag acaatataaa acatataatg gactttagca tggtcgaagg
     2461 tttttaccac tatgtacatc ttaaaaattt gagttgctaa atgggggagt caaaggcatg
     2521 tcgggtagaa tcagttaggg gtgttcttcg gtttggtttt ccatttattc ggt
//
LOCUS       XR_011757320            2615 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840276), transcript variant X7, ncRNA.
ACCESSION   XR_011757320
VERSION     XR_011757320.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2615
                     /gene="LOC139840276"
                     /note="uncharacterized LOC139840276; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840276"
     ncRNA           1..2615
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840276"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139840276"
ORIGIN      
        1 cacgatccca tattttttcc attcgccacg tgtcttgatt ttctattttt tttttttttt
       61 caacaccaac taaaattaag gattttcctc cgttccacat taattttcat cgatccctct
      121 ccatatggtt ttgaatcagt gggtatcaca attacgtctt ctacgcatcc aaaattagag
      181 ttgcacaatt aggtcttcag atgcgattga taaaacacat cggtttcaag aactctctgg
      241 gattactatt catcatcaat catcaatttg aatgaaacga ttacgcgatg acgaccagcg
      301 aaatcacttt aagggtcttt cagttttgat ctggttttgt tatcattcga ttttagagaa
      361 acaaattggc attttgtaca ctcatgatca ggagcttctc cctagaataa gaaccaagaa
      421 tctataaagg taaagttaaa agtgtgttgg gtgatataat gtgaatatgt aattgttatg
      481 gagtgtttta atgctcgcta aatcctaatt ttagtttctc ctttttccat tattgtccca
      541 atttattaac ccagattgat tgatattttg tttgatttat attatctttt tttgcatttc
      601 gtttatgatt tgatggacac ggtatggatg catatatcat aagcagaggc ttaggatgta
      661 tgccagattt aaaggatatt aaggaaccag tggccaataa gttaaagctt agacattttc
      721 acacatacaa taatagctta aaatagctaa ctgtacccat gtcttttggt actagactgg
      781 gagctttggt ctcttgaaaa catcttgaca aataagcact tgcagttgaa gtaattggta
      841 accgttgttg tacattcaat gatgaagtca tacttcacac acaataaatg gaccttcgaa
      901 taagtatgat caagaagcaa gtataccgac tgataaggac caccttttca cctgcaaagg
      961 aaagatccta aagatagagg accggacgtg caacaagaat atggatgaca tcagaaacgg
     1021 cataggttac gttaaccacg ggagacaaga cgatagttat agggtatata tacaaacacc
     1081 ttctaacaat agcttaaaaa aagttgcagg tactgtttca aagtcatctt ccaggatgac
     1141 tctagagaag ccagatttac cttcttcgaa gaatcaggcc aaccatgcca aacattgata
     1201 tcacagattg aaccaaacaa acgcaacgat ctatcatcaa atatatatgc gtgtgtaata
     1261 agaaggctgt tattcatgat tcttctaatg gttcggtgga gaagacggcc gagcaaactg
     1321 aaagcttatc aggtgaccat tgcatccttg tgagaatact cagacacaca tatacatacc
     1381 cattagatat taaatcaagg gttttattgt actttttaaa gcttcgaacc tacattctct
     1441 ggtatgagaa ataagcaggt tggtaatggg ttttgtagtt catcgcagat tgcttaaata
     1501 aacttagggt gtgcgccctt ccacatgaaa atgaataaga tactggtcaa actgtcaggg
     1561 acctctaagt aattcaaaaa agttattatt gacatgaact tcaacaatat aatgattcat
     1621 atcctaattc atacagataa attagctaac attgttctgt gagtttgaag ttcaaatata
     1681 tataggtatt tgaagttttt tctaacaatg ataatggctt tacttcgttt ggttctataa
     1741 tgttaaactg aagatgtgga cccaagcgta ggcttgatgg gatcaattcc ttgcgaccag
     1801 ttgacgagtt taacatattt cgttgccaaa ttcattcaaa gtggtgaatc ctacactaat
     1861 tattatatgg tgtacgttta caagaacaaa aaggtaggct gttatgtttt cctcgcgagt
     1921 gatgataaat cggcttttgc aacagtagct ttccataatc ggcattatga tctgcctcct
     1981 tggtctgttg atgtaaaacc cgataaaaca gaagattatt gaggttagag tcgatcgcga
     2041 atggttttcc ctgcaacaat tcaggtttgt gagttttaca gcagccatga agatatgttt
     2101 aatgcgtgaa atataccaat ttataataaa gtataagata acatgaaaat tatgaaatgg
     2161 tgataacagg ttcagttttt gaagtgagat ttgatgctta tacgattccg ttagtacaga
     2221 tgtatagtta acttgattat gctgattatg ctcgtgtaat tagtattgaa gtagttttgt
     2281 tttataaaca ataagaattg tatccttttt ctgtacttag ttggcgttct tgcttagaac
     2341 ttatcagtta atctcaagtt tatatcactt gatactgctt atatcgttta tccaacagac
     2401 caagtttgta ttttggtaca ctcgacgcac acctggagtc cggactcaga catcatatga
     2461 agacaatata aaacatataa tggactttag catggtcgaa ggtttttacc actatgtaca
     2521 tcttaaaaat ttgagttgct aaatggggga gtcaaaggca tgtcgggtag aatcagttag
     2581 gggtgttctt cggtttggtt ttccatttat tcggt
//
LOCUS       XM_071830538            4256 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840277), mRNA.
ACCESSION   XM_071830538
VERSION     XM_071830538.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4256
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4256
                     /gene="LOC139840277"
                     /note="uncharacterized LOC139840277; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840277"
     CDS             19..3984
                     /gene="LOC139840277"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686639.1"
                     /db_xref="GeneID:139840277"
                     /translation="MASTITEFSHLHIPLEEVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDSKHKRGIEFWTEISALSNLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLMMYLSNPTLTWVQRLKICLGVARALSYIHYENGRSYSVIHRNINSSTILLDN
                     NFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYMDPAIQETGGVTYKSDVYSFSVVL
                     WEVLCGRKSFIPNCFDRFLVPLAKFHFEASTVNAITLSCLLQSQLSLVSVHTFTAVAY
                     SCLNDERVLRPDMNYVVSELEKALELQMPYEIYFRNTLEHLKFQVSDLTIRLADIMLA
                     TDNFSAAYRIPGTSDYELYKSELELFDKEKVASLEEKNNSELIRTRTPVVIKRVFPRE
                     DKQEDVFNTELEMLTVCKHRNIVTLLGVCDEGSETILVVDNAFNGYLDEYLFNIKDMP
                     ILTWAQRLNICLDVAHALNYLHYEMEDQKAVINCDIRSATIALDENWGAKIAHFGFSV
                     FLPPNLDALDINSILGYESSIDPEYEDTGKLTRESDVYGFGVVLFEMLWGKASYDEAF
                     TWESERGLAFIVRRCFHDGTLREMIDPIIKNECNKDSVDVFIKIAYQCIANTQDQRPT
                     MKVVVKELERALSLQEDRVQCQEIDQVVEEFWKSVKPTNENLMKKENAVVRYYWDNTE
                     DTPYSYLNIRRSDIILATDYFSKTYHIGNNGTYDMYKARLEVFDQEKFASEEEKNKAG
                     GVPKRLTTVCLKCFHVRDVDAEKLFLHCFLMHVSCKHNNIGDLLGLCDEGSEMVLVLE
                     YPSNGYLFDYLVNTEDKPILTWAQRLRICLDIAYGLKYLHYEIGDGKAIIHAQLRSKC
                     IGLDENWGAKILDNGFFLYVPNRDGDVVHYDNPVGPTSYRDPEFTRTGTLKRETDVYS
                     LGVIMFEILCGKTANNRIYKKESDTGLAYVATRCFHDGTMKEIIDPVLKNGTGENKFS
                     LNRGPNKKSLNAFLEVAYKCLEENRDQRPTIISVVDELEKALYFQENNDDGDLRITLD
                     DIKLATENFNVSNCVGGGGFGNVYKGKLSQSDDTIVAKKLDTSGGQGEQQFRIELQIL
                     FEYKHQNIIGLVGYCDQEDAKVIVYEYAPRGSLDRYLSDARLNWIKRLQICIDVATAL
                     DFLHRGIGKPGTVIHRDIKTANILLTGEWKAKLADFGLSLISTIHKETDYVINRACGT
                     PGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYLPSFIKHNFENE
                     KRDDVVFEKIKAQIMPKALTAFRKIAYRCLRDDREKRPKAKEVVKQLKKALRFQMQRD
                     D"
     misc_feature    109..912
                     /gene="LOC139840277"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(109..120,127..129,133..135,178..180,184..186,
                     268..270,316..327,466..468,478..483,487..489,517..522)
                     /gene="LOC139840277"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1159..1920
                     /gene="LOC139840277"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2143..3054
                     /gene="LOC139840277"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2143..2154,2161..2163,2167..2169,2266..2268,
                     2272..2274,2359..2361,2407..2418,2569..2571,2581..2586,
                     2590..2592,2620..2625)
                     /gene="LOC139840277"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3151..3951
                     /gene="LOC139840277"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3151..3162,3169..3171,3175..3177,3217..3219,
                     3220..3222,3307..3309,3355..3366,3505..3507,3517..3522,
                     3526..3528,3556..3561)
                     /gene="LOC139840277"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 caacacaaaa gataatatat ggcatctaca atcacggagt ttagtcactt gcatatccca
       61 cttgaagaag tcctagaagc caccaatcac tttgatgata aaaatgtcat cggccatggt
      121 ggtttgggca aggtttataa aggaaagctt ttgcgatccg gaaaatgggt aaatattgct
      181 gcacggagat tagacagtaa gcataagcga ggcatcgagt tctggacaga gatttccgct
      241 ctatccaatc tcaagcatga aaacatagtc tctattatcg gattttgcga tgaaaaaggt
      301 gagaaggtga tcataaacaa acatgaggcc aaaagaagtc tcatgatgta tctaagcaat
      361 ccaactctca catgggttca aagattgaag atatgtcttg gtgttgcgcg tgcattaagt
      421 tacatccatt atgagaatgg acggagttac tcagtgatac atcgtaacat caacagctcc
      481 acaatacttt tagacaataa ttttgagcca aagttatctg gttttgaata ttccattaac
      541 cattcagtac aacgaatgga tcaggttctc ttctcagaag ctattggcac aacagggtat
      601 atggacccag caattcaaga gactggaggt gttacctaca agtcagacgt ctactcattt
      661 agtgttgttt tatgggaagt attatgcggg aggaaatcgt ttattcctaa ttgttttgat
      721 aggtttctag ttccactagc caaatttcac tttgaagcta gtacagtaaa tgctataacg
      781 ctaagttgcc tactacagag ccaattgtcc ctggtatcag tccacacctt cacagcagta
      841 gcatattcct gcttaaatga tgagagagta cttcgcccag atatgaacta tgttgtgtcc
      901 gaacttgaga aagcattgga acttcagatg ccatatgaaa tttattttag aaacactttg
      961 gagcacttga aatttcaagt gagtgacttg acgattagac tcgctgacat aatgttggcc
     1021 acagataact tttctgcagc ataccgcatc ccgggtactt cagactacga attgtacaaa
     1081 tcagaacttg agcttttcga taaagaaaag gttgcctctt tagaagagaa gaataatagt
     1141 gaactaatca ggacacgtac ccctgtagtt ataaaacgtg tcttccctag agaagacaaa
     1201 caagaagacg tattcaatac agaactggaa atgcttacag tttgtaagca tcgcaatata
     1261 gtcactttac ttggagtttg tgatgaaggt tcggagacga tcctcgttgt tgacaatgct
     1321 tttaatgggt accttgatga atatttgttt aatatcaaag acatgcctat tcttacttgg
     1381 gcacaacgtt tgaacatatg ccttgatgtt gcacatgctt taaattacct acactatgag
     1441 atggaagatc aaaaggcggt tataaactgt gatataagga gcgctacaat tgctttagat
     1501 gagaattggg gtgcaaagat tgctcacttt ggtttctctg tatttcttcc tccaaatcta
     1561 gatgctcttg atatcaattc tatccttggc tatgaaagtt cgatcgatcc agaatatgag
     1621 gatacgggta agttaacacg agaatcggat gtatatggtt ttggagtagt tttgtttgaa
     1681 atgttatggg ggaaggcatc ctatgacgaa gcttttacgt gggagagcga gaggggactg
     1741 gcgtttatcg tacgaagatg ctttcatgac ggtacactaa gggaaatgat agatcctata
     1801 attaagaatg agtgtaacaa agattctgta gacgtattca ttaaaattgc atatcagtgt
     1861 atcgcaaaca ctcaagacca acgtccaaca atgaaagtcg tcgttaaaga gcttgagaga
     1921 gcattatctt tgcaagagga tcgagttcaa tgccaggaaa tcgaccaagt tgtcgaagaa
     1981 ttttggaaat cagtaaaacc gacgaatgaa aatcttatga aaaaggaaaa tgcagttgta
     2041 cgctattatt gggataacac tgaggatact ccctattcat acctaaatat tcgccggagt
     2101 gatataattt tggccaccga ttacttttct aagacatatc atattggtaa taatggaacc
     2161 tatgacatgt acaaagcaag acttgaggtt tttgatcaag aaaaatttgc ctcagaagaa
     2221 gagaagaata aagctggtgg agtaccaaag agactcacta ccgtatgttt gaaatgcttc
     2281 cacgttagag atgtggatgc agaaaaacta tttttacatt gttttctcat gcatgtaagt
     2341 tgtaagcata acaacatagg ggatctacta ggattatgtg atgaaggttc tgaaatggtc
     2401 ctcgttttgg agtatccttc taacggttat cttttcgatt atttggtaaa cacggaagac
     2461 aaaccgattc ttacgtgggc acaacgtttg agaatatgtc ttgatattgc atatggatta
     2521 aagtacctac actatgaaat tggagacgga aaggcaataa tacacgctca attaaggagc
     2581 aaatgcattg ggttggatga gaattggggg gccaagattc ttgacaatgg tttcttttta
     2641 tacgttccga atagagatgg tgatgttgta cattatgata atcctgttgg ccctacaagt
     2701 tacagggatc cagaatttac taggacgggt acgttgaaaa gagaaacaga tgtatacagt
     2761 ttaggagtaa ttatgtttga aattttgtgt gggaagacag ccaataatcg catttacaaa
     2821 aaggagagtg acactgggct ggcatatgtg gcaacaagat gcttccatga tggaactatg
     2881 aaagaaatca ttgatcctgt acttaagaat ggaacaggtg agaacaaatt ttccctaaac
     2941 agaggaccta acaaaaagtc tctcaatgca tttctggaag ttgcatacaa gtgtttggaa
     3001 gaaaatcgag atcaacgtcc aacaataata agcgttgttg atgagctcga gaaagcctta
     3061 tattttcaag aaaacaacga tgacggtgac ctcaggatta cacttgatga tataaagttg
     3121 gccactgaaa acttcaatgt tagcaattgt gttggtggag gaggatttgg aaatgtttat
     3181 aaaggaaaac tttcacaaag tgatgataca attgttgcaa agaaattgga tacaagtggt
     3241 ggtcaagggg aacaacaatt tcgcattgag ctccaaattc tttttgagta taagcaccaa
     3301 aatatcatcg gtcttgttgg ctattgtgat caagaagacg cgaaagttat tgtttatgag
     3361 tatgcgccta gaggaagtct tgataggtat ttgagcgatg ctcgtcttaa ttggataaaa
     3421 agacttcaaa tatgtattga tgttgcaacc gcattggatt ttcttcatag aggtatcgga
     3481 aaaccaggaa cggtgataca tagggacatc aaaaccgcta atatattgct aaccggcgag
     3541 tggaaagcaa aactcgctga ttttggactt tccttgataa gtacaataca caaggagact
     3601 gattatgtca tcaatcgtgc gtgtggcaca ccgggctatg tggatccact ttacttaaaa
     3661 tcgggcttct taaccaaaga atccgatata tattcgtttg gtgttgtttt atttgagatg
     3721 ttgtgtggta gatcaacatt tgagacccac aaacgggaag gtatgtatct accaagtttc
     3781 attaaacaca actttgaaaa tgaaaaacgt gatgacgtgg tgtttgagaa aataaaagca
     3841 cagatcatgc cgaaagcatt gactgcattc cgaaaaattg cgtaccggtg cttgcgtgat
     3901 gatagagaaa aacgaccaaa agcaaaagaa gttgtaaaac aacttaagaa ggcattgaga
     3961 tttcaaatgc agagagatga ttgagcttct acaacaagta gtcagtatca actgcaagat
     4021 tggaagtcaa atggttcgcg ctgtcaggta aatggatggt cgctaatgtg tggaaaactc
     4081 aacatatatc atgagtttaa aaggctcttc attgatgaaa tggtgttcat tcttcatatg
     4141 tgtaaatgtg tatgatctga ttatattttt gtatatgcag ccgtaaggat tctgctgctg
     4201 tttggctttc tacttctgta tttgatggat ttttatctgt acttcatatt tgttaa
//
LOCUS       XM_071830539             824 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840278), transcript variant X1, mRNA.
ACCESSION   XM_071830539
VERSION     XM_071830539.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..824
                     /gene="LOC139840278"
                     /note="uncharacterized LOC139840278; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840278"
     CDS             140..649
                     /gene="LOC139840278"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686640.1"
                     /db_xref="GeneID:139840278"
                     /translation="MILLSPFQKSLRLQWLREHLACRPLRVIVDMELKAMQTLVPNSD
                     KEYKEREKQKNVTTDKSDDSIVHSHASTNNGIITNTPLQVGKEVYIKSIGDPTLVVAK
                     GWLCSLDPLTVVGGIEIGTDLGEVNIQVAIKRDEQLIRPFDLVNKIVEATGVVIAWPC
                     SLISVVPLD"
     misc_feature    398..589
                     /gene="LOC139840278"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
     polyA_site      824
                     /gene="LOC139840278"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatacggtgt gtttcccatt aaacgattag tcgttgcatc ctttggactg gtcaccatcg
       61 aaacattatt ttattggtag aaggatgact gcacatatgt tcaaatattc ttaagcttaa
      121 gtgattagtc taggaatcga tgatactact gagcccattc cagaagtcat tacgtctgca
      181 gtggctaaga gagcacttgg cttgtcgacc gttgagggtt atagtagata tggagctgaa
      241 agctatgcag accttggttc caaattctga caaggagtat aaagaacgtg aaaaacagaa
      301 gaacgttacg acagataaat ccgatgattc cattgttcat tctcatgcat caacaaataa
      361 tggcataatt accaatacgc ctctacaggt tgggaaagaa gtctacataa agagcattgg
      421 tgatcctacc ctagttgtcg caaaaggttg gctttgtagt ttagacccac taacagtggt
      481 tggaggaata gagattggta cagatttggg tgaagtaaat attcaggtcg caataaaaag
      541 agatgaacaa ttgataagac catttgacct tgttaataaa attgtagagg ctaccggtgt
      601 ggttattgcg tggccatgtt ctttaatctc ggttgtgcca ctggattaag atcgcatgat
      661 tagcggggag ttatgcttga tgatgttgct gctctttttt taaatgtttg attactttta
      721 tgttggattt tttttactgt gtcacttatt tatccttttt tcagtttgca acaatattat
      781 gtatttcatt tttattttat taatggaaat tattaattgc atgt
//
LOCUS       XM_071830540            1291 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840278), transcript variant X2, mRNA.
ACCESSION   XM_071830540
VERSION     XM_071830540.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1291
                     /gene="LOC139840278"
                     /note="uncharacterized LOC139840278; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840278"
     CDS             607..1116
                     /gene="LOC139840278"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686641.1"
                     /db_xref="GeneID:139840278"
                     /translation="MILLSPFQKSLRLQWLREHLACRPLRVIVDMELKAMQTLVPNSD
                     KEYKEREKQKNVTTDKSDDSIVHSHASTNNGIITNTPLQVGKEVYIKSIGDPTLVVAK
                     GWLCSLDPLTVVGGIEIGTDLGEVNIQVAIKRDEQLIRPFDLVNKIVEATGVVIAWPC
                     SLISVVPLD"
     misc_feature    865..1056
                     /gene="LOC139840278"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
     polyA_site      1291
                     /gene="LOC139840278"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atatttagga ttacttgaaa aacatagcat gggatgtaca gatatgtaca tgttatttgt
       61 agctaactcg tagaatatgt tcttggtaca aggtgaactg tttatgccat aaggcatgac
      121 taacaacttt taaagacttt aattgtcttg cactcatatc catttttgat gaactttaaa
      181 ctactttgtt tttgataaat atggttatgg ttatattaaa gaacggaact cttacattta
      241 ttttataaga acctcgaatt gcacctgaaa tcattaatgc tatcgtatga tcaataaaag
      301 aatgtttcaa tacaactcgg gaggttaagg tgattttttc agccattcag attcattata
      361 tggttggggt gacaatatgg gcgggtatgg ttccccaggt aactgtttct aacgttcatt
      421 tacgatcttc atttctatgg acaaataact gataaattat gatgttgttg cctgttgttt
      481 ttttattgta tcaggaaatg atactttttt taaatgattt tttgaatgtc gaatcacaga
      541 ttggtagaag gatgactgca catatgttca aatattctta agcttaagtg attagtctag
      601 gaatcgatga tactactgag cccattccag aagtcattac gtctgcagtg gctaagagag
      661 cacttggctt gtcgaccgtt gagggttata gtagatatgg agctgaaagc tatgcagacc
      721 ttggttccaa attctgacaa ggagtataaa gaacgtgaaa aacagaagaa cgttacgaca
      781 gataaatccg atgattccat tgttcattct catgcatcaa caaataatgg cataattacc
      841 aatacgcctc tacaggttgg gaaagaagtc tacataaaga gcattggtga tcctacccta
      901 gttgtcgcaa aaggttggct ttgtagttta gacccactaa cagtggttgg aggaatagag
      961 attggtacag atttgggtga agtaaatatt caggtcgcaa taaaaagaga tgaacaattg
     1021 ataagaccat ttgaccttgt taataaaatt gtagaggcta ccggtgtggt tattgcgtgg
     1081 ccatgttctt taatctcggt tgtgccactg gattaagatc gcatgattag cggggagtta
     1141 tgcttgatga tgttgctgct ctttttttaa atgtttgatt acttttatgt tggatttttt
     1201 ttactgtgtc acttatttat ccttttttca gtttgcaaca atattatgta tttcattttt
     1261 attttattaa tggaaattat taattgcatg t
//
LOCUS       XM_071830541            2181 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840280), mRNA.
ACCESSION   XM_071830541
VERSION     XM_071830541.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2181
                     /gene="LOC139840280"
                     /note="uncharacterized LOC139840280; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840280"
     CDS             56..1918
                     /gene="LOC139840280"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686642.1"
                     /db_xref="GeneID:139840280"
                     /translation="MNRSFRAPEKVMPAPATVKQRQKQPQMIGSFRKSELKDKDEELG
                     LFLEMRKREKERDLLFQNTDEDEFDSSLGSIEGTSQMFSMPSVTSARKNGADELLNSE
                     NDKNDYDWLLTPPGTPLFPSLEMESQKTVMGQMGTPKTRPAGLKSRLSNTHPETTGRN
                     NMVSRQPMMSSPGLNTSSNGLRRPSSSGGPGSRPATPTGRPATSSGRPATSTGRPATS
                     NGRPATSNGRPTSSNGRPATPTGRPTLGSSTRSVSSNSIPKAASNSTSRTTSTATSRP
                     SRSSTPTSRPITGPTKPTVPSRSSTPTPRSTARSSTPTTRPSLNAYKPASRASTPTRR
                     QPTSSTITRTSSNPTLKSPTFTKPAPSTTRSAPSTTRTAPPQRASSPSVRPRPWKPHE
                     MPGYSLDAPPNLRTSLSDRPTSAQRGRSGAPSSRSSSVEPVANGRVRRQSCSPSRGRL
                     PNGMGHYSGSSVPVPALNRAYAKANDNLSPGLYGTKMVERVINMRKLVPPRQDDNRSP
                     HSNLSSKSSPDSSGFGRSLSKKSLDMAIRHMDIRRTVPGNLRPLMTNIPASSMYSVRP
                     GPTRSRTIGVSDSPLATSSNASSEMSVSNNGPCLDGNMDDEISSERGIYNIRGR"
     misc_feature    <599..1462
                     /gene="LOC139840280"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
ORIGIN      
        1 agtatattct tatacagata taactatata agatgtgaaa aaatttattc tggtgatgaa
       61 tcgaagtttt cgagcgccgg aaaaggtaat gccggcaccg gcgactgtga agcaacggca
      121 gaagcagccg caaatgattg gtagttttag gaagtctgaa ttgaaagata aagatgaaga
      181 gttagggtta tttttggaaa tgagaaaacg tgaaaaagaa cgtgatcttc tctttcagaa
      241 tactgatgaa gatgagtttg attcatcact tggatcaatt gaaggtactt cacagatgtt
      301 cagtatgcct tcagtaacat ctgcacgaaa gaatggtgct gatgagcttc tcaactctga
      361 aaatgataag aatgattatg attggctttt gacgccccct ggaacacctc ttttcccttc
      421 tcttgaaatg gaatcacaga aaaccgtcat gggtcagatg ggaactccta aaacccgtcc
      481 tgctggacta aaatctcgac tatcaaatac ccacccggag actactggta ggaataatat
      541 ggtatctaga caaccgatga tgtcatctcc cgggttaaac acttcaagta atggactccg
      601 taggccctcc tcttctggag gtccaggatc acgtccagct actccaactg gaaggcccgc
      661 tacctcaagc ggaaggcccg ctacctcaac tggtaggccc gctacctcaa acggaaggcc
      721 cgctacctca aacggaaggc ccactagctc aaacggaagg cctgctactc caactgggag
      781 gcccacgttg ggttcgtcaa ctaggtctgt atcatcaaat tctataccta aagcagcttc
      841 taactcaact tctagaacca cgtcaactgc aacatctaga ccttcaagat catctacacc
      901 tacttctcga cccattacgg gcccaactaa gcctacggtc ccatctcgat cttctactcc
      961 tacaccaaga tctactgcca ggtcatcaac ccccacaact agaccatctt taaatgcata
     1021 caaacccgca tcacgggcct caacaccaac tcgtagacaa ccaacatcgt ctacaataac
     1081 aagaacatca tcaaacccta cgcttaaatc tcctacattc actaagcctg caccaagtac
     1141 aacaagaagt gcaccaagta caacacgaac tgcaccacct caacgggcta gttctcctag
     1201 cgtaagaccg cgcccatgga aacctcatga aatgcctggt tactcacttg atgcaccgcc
     1261 aaatttacgg acctcacttt cggataggcc tacttcagct caaaggggtc ggtctggtgc
     1321 accaagtagc cggtcttcat cggttgagcc agtagctaat ggaagggtaa gaaggcaatc
     1381 ttgctcacct tcaagaggac gtctacctaa cgggatgggt cattatagtg gaagctctgt
     1441 acctgttcct gcactgaatc gtgcgtatgc taaagctaat gacaatttga gtcccggttt
     1501 atatggaaca aagatggttg aaagggtaat aaacatgaga aaacttgtac ctccaaggca
     1561 agatgataac cgttcacctc atagtaactt atcttccaaa tcatctcctg atagctctgg
     1621 attcggaaga tcactttcaa agaaatcctt ggatatggct atacgacata tggatataag
     1681 gcggacagtg ccaggaaacc tgaggccgtt gatgactaat attccagcat catcaatgta
     1741 cagtgtgaga cctggtccca caagaagtcg aacaatcggc gtttcagatt cacctcttgc
     1801 aaccagcagc aatgcaagct ctgagatgag tgttagtaac aatggtccgt gtttggatgg
     1861 aaacatggac gatgagatca gcagcgagag gggcatctat aacatccgtg gaaggtaaga
     1921 cttatgagat ggattcatga attgttacct ctgattttac actctaattt gtatgttaac
     1981 atgtcgacct gcttacccta tgaatgatac agtattatct aatttagtta ttagtttgaa
     2041 aagttcgaat cttggttatc tcaacttgct aacaagtgac acatttcctt agtttcttga
     2101 ctaatttggt ttgtatgttg tcctttatat tagaaatgcc acacaaatcg accgagttgt
     2161 cttgtagaaa ctgtttttca c
//
LOCUS       XR_011757321            2055 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alanine--glyoxylate
            aminotransferase 2 homolog 1, mitochondrial-like (LOC139840281),
            transcript variant X1, misc_RNA.
ACCESSION   XR_011757321
VERSION     XR_011757321.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2055
                     /gene="LOC139840281"
                     /note="alanine--glyoxylate aminotransferase 2 homolog 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840281"
     misc_RNA        1..2055
                     /gene="LOC139840281"
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     1, mitochondrial-like, transcript variant X1"
                     /db_xref="GeneID:139840281"
ORIGIN      
        1 ctgattttga tcttcaacat ggcagaccac aagatttctt ttacttatta ttaccatatt
       61 caagcaacta ttaataagtg gtgcttcata tgtatatttt atgtaaatct aattggttaa
      121 aatctttcaa taccaacaag tgtgattgtt gccctaattt ctgtctgaag gactaattaa
      181 tgttctagtt tgtgttgtta gccctaaatt atggatgaag actaccgaaa atccagaatt
      241 tttgaattta gaatacgatt atgagtgttt gacctaattt tgggaagaag acgatcagtt
      301 cacactacac agtgacaacc gagtcaaaat cgacattcaa ttttacttga aattgagggt
      361 gaaatacatc atgttgtgaa tccaaatccg tatcgtgggg tgtttgggtc ggatgctaaa
      421 agctatgcgc aagacgtaca agatcacatt gatcatggta cttccggaag agttgcaggt
      481 tttatatctg aaaccattca gggtagtttt tttttttaat gaaaacttgt tttaaattat
      541 gatgaacttg tacaattact tgtcaagcta gaattttgat tgaactttag tgagttgggg
      601 gagcggttga attggtcccg ggattccgta aagcgagtgg tgtatgcatt gccgatgaag
      661 ttcaaacggg attcggtcgt acaggaagcc attactgggg ttttcaaaca caggacgtga
      721 ttccggatat tgttaccatg gcaaagggaa ttggaaatgg tttaccttta ggagcagtgg
      781 ttacgactcc tgaaatagca caagttatgt ctcaaaaatt acaattcaac acgtttggag
      841 gtaaccctgt gtgctcggct ggtggacttg cggtccttag ggttctcgat aaggaaaacc
      901 gccaaactca ttgtgctaat gttggttcac atttgatcgg gcggttgaaa gatcttcaac
      961 aaaaatatga aataatcggt gatgtgagag ggagggggtt gatggttggc atcgagcttg
     1021 taactgaccg taaagagaag atgcctgcta aagccaaaac tgccattttg ttcgagaaat
     1081 tacgaggtca acaaatctca caaaagttga gcttatcgtg gtattttcat gtactaaaaa
     1141 atttagacaa ttaactcaat ttcggtttat caactcgatc ataggatcta acagtgatgg
     1201 ctttgttaat gagtgagtac aattagcttt tccaatccat atctgaagtc tttcatctca
     1261 attctcattt atcaactcat aagatctaac agtaatggct ttgttagaag tttaaaggta
     1321 ttagaaccat cttaaccatc ttaactcaat aaggaatttt acaatttaaa ttattttttc
     1381 actattttgt gtgtgtcatt gtgttgtgtt gataattctt gatattgtat gtatgaatgt
     1441 tatgtaggat agcagctaga tagaaatgta tcagaggaag cttcctctgt tgcgtatttc
     1501 ggaaccttga taatacatta ttgcatgaac gtattgagaa gtcaggaaag aaactaaact
     1561 ttacaattgg tatttttaac ctgttaatca agaaacttaa atgtgttcca tttatttcag
     1621 ttaatcacaa tttcttatat ttgtatcata cttgtggcat tctttatgtt attgcaggga
     1681 cgtgaacgtc cacattgagg cgataagaac ctgagtcctg ttgcgagaca aaataagggt
     1741 cgttcgggta gatcaaagaa aaaagtcact aaaaggtgcc caaaacagga tgtctcgctc
     1801 acaaacgaat aaggtttaga cgaatctccg tcatcggcgc ttctgattcg acttcggctt
     1861 gagaaatttt aaatggattg cgttgttact ttaataaagc gttgccggca atgctttttc
     1921 acagatgttt ttaacaacca acgttacaaa tgtatgatga aagaagctaa catttacaaa
     1981 atagcaaaca agtccagatt attgcttgta tactagggcc ttgaacgtat tagcatatat
     2041 actaagccat catat
//
LOCUS       XR_011757322            1967 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alanine--glyoxylate
            aminotransferase 2 homolog 1, mitochondrial-like (LOC139840281),
            transcript variant X2, misc_RNA.
ACCESSION   XR_011757322
VERSION     XR_011757322.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1967
                     /gene="LOC139840281"
                     /note="alanine--glyoxylate aminotransferase 2 homolog 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840281"
     misc_RNA        1..1967
                     /gene="LOC139840281"
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     1, mitochondrial-like, transcript variant X2"
                     /db_xref="GeneID:139840281"
ORIGIN      
        1 gtggtgcttc atatgtatat tttatgtaaa tctaattggt gagcatacgt ttgttacaaa
       61 aaccccatga tcaatattcg ttcatgataa tattgatgtt ttctactaac acttactact
      121 atctgaaaat cgcaacattc acaatcattg tatgcaggtt aaaatctttc aataccaaca
      181 agtgtgattg ttgccctaat ttctgtctga aggactaatt aatgttctag tttgtgttgt
      241 tagccctaaa ttatggatga agactaccga aaatccagaa tttttgaatt tagaatacga
      301 ttatgagtgt ttgacctaat tttgggaaga agacgatcag ttcacactac acagtgacaa
      361 ccgagtcaaa atcgacattc aattttactt gaaattgagg gtgaaataca tcatgttgtg
      421 aatccaaatc cgtatcgtgg ggtgtttggg tcggatgcta aaagctatgc gcaagacgta
      481 caagatcaca ttgatcatgg tacttccgga agagttgcag gttttatatc tgaaaccatt
      541 cagggtagtt ttttttttta atgaaaactt gttttaaatt atgatgaact tgtacaatta
      601 cttgtcaagc tagaattttg attgaacttt agtgagttgg gggagcggtt gaattggtcc
      661 cgggattccg taaagcgagt ggtgtatgca ttgccgatga agttcaaacg ggattcggtc
      721 gtacaggaag ccattactgg ggttttcaaa cacaggacgt gattccggat attgttacca
      781 tggcaaaggg aattggaaat ggtttacctt taggagcagt ggttacgact cctgaaatag
      841 cacaagttat gtctcaaaaa ttacaattca acacgtttgg aggtaaccct gtgtgctcgg
      901 ctggtggact tgcggtcctt agggttctcg ataaggaaaa ccgccaaact cattgtgcta
      961 atgttggttc acatttgatc gggcggttga aagatcttca acaaaaatat gaaataatcg
     1021 gtgatgtgag agggaggggg ttgatggttg gcatcgagct tgtaactgac cgtaaagaga
     1081 agatgcctgc taaagccaaa actgccattt tgttcgagaa attacgaggt caacaaatct
     1141 cacaaaagtt gagcttatcg tggtattttc atgtactaaa aaatttagac aattaactca
     1201 atttcggttt atcaactcga tcataggatc taacagtgat ggctttgtta atgagtgagt
     1261 acaattagct tttccaatcc atatctgaag tctttcatct caattctcat ttatcaactc
     1321 ataagatcta acagtaatgg ctttgttaga agtttaaagg atagcagcta gatagaaatg
     1381 tatcagagga agcttcctct gttgcgtatt tcggaacctt gataatacat tattgcatga
     1441 acgtattgag aagtcaggaa agaaactaaa ctttacaatt ggtattttta acctgttaat
     1501 caagaaactt aaatgtgttc catttatttc agttaatcac aatttcttat atttgtatca
     1561 tacttgtggc attctttatg ttattgcagg gacgtgaacg tccacattga ggcgataaga
     1621 acctgagtcc tgttgcgaga caaaataagg gtcgttcggg tagatcaaag aaaaaagtca
     1681 ctaaaaggtg cccaaaacag gatgtctcgc tcacaaacga ataaggttta gacgaatctc
     1741 cgtcatcggc gcttctgatt cgacttcggc ttgagaaatt ttaaatggat tgcgttgtta
     1801 ctttaataaa gcgttgccgg caatgctttt tcacagatgt ttttaacaac caacgttaca
     1861 aatgtatgat gaaagaagct aacatttaca aaatagcaaa caagtccaga ttattgcttg
     1921 tatactaggg ccttgaacgt attagcatat atactaagcc atcatat
//
LOCUS       XR_011757323            2011 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alanine--glyoxylate
            aminotransferase 2 homolog 1, mitochondrial-like (LOC139840281),
            transcript variant X3, misc_RNA.
ACCESSION   XR_011757323
VERSION     XR_011757323.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2011
                     /gene="LOC139840281"
                     /note="alanine--glyoxylate aminotransferase 2 homolog 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840281"
     misc_RNA        1..2011
                     /gene="LOC139840281"
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     1, mitochondrial-like, transcript variant X3"
                     /db_xref="GeneID:139840281"
ORIGIN      
        1 gtggtgcttc atatgtatat tttatgtaaa tctaattggt gagcatacgt ttgttacaaa
       61 aaccccatga tcaatattcg ttcatgataa tattgatgtt ttctactaac acttactact
      121 atctgaaaat cgcaacattc acaatcattg tatgcagccc taaattatgg atgaagacta
      181 ccgaaaatcc agaatttttg aatttagaat acgattatga gtgtttgacc taattttggg
      241 aagaagacga tcagttcaca ctacacagtg acaaccgagt caaaatcgac attcaatttt
      301 acttgaaatt gagggtgaaa tacatcatgt tgtgaatcca aatccgtatc gtggggtgtt
      361 tgggtcggat gctaaaagct atgcgcaaga cgtacaagat cacattgatc atggtacttc
      421 cggaagagtt gcaggtttta tatctgaaac cattcagggt agtttttttt tttaatgaaa
      481 acttgtttta aattatgatg aacttgtaca attacttgtc aagctagaat tttgattgaa
      541 ctttagtgag ttgggggagc ggttgaattg gtcccgggat tccgtaaagc gagtggtgta
      601 tgcattgccg atgaagttca aacgggattc ggtcgtacag gaagccatta ctggggtttt
      661 caaacacagg acgtgattcc ggatattgtt accatggcaa agggaattgg aaatggttta
      721 cctttaggag cagtggttac gactcctgaa atagcacaag ttatgtctca aaaattacaa
      781 ttcaacacgt ttggaggtaa ccctgtgtgc tcggctggtg gacttgcggt ccttagggtt
      841 ctcgataagg aaaaccgcca aactcattgt gctaatgttg gttcacattt gatcgggcgg
      901 ttgaaagatc ttcaacaaaa atatgaaata atcggtgatg tgagagggag ggggttgatg
      961 gttggcatcg agcttgtaac tgaccgtaaa gagaagatgc ctgctaaagc caaaactgcc
     1021 attttgttcg agaaattacg aggtcaacaa atctcacaaa agttgagctt atcgtggtat
     1081 tttcatgtac taaaaaattt agacaattaa ctcaatttcg gtttatcaac tcgatcatag
     1141 gatctaacag tgatggcttt gttaatgagt gagtacaatt agcttttcca atccatatct
     1201 gaagtctttc atctcaattc tcatttatca actcataaga tctaacagta atggctttgt
     1261 tagaagttta aaggtattag aaccatctta accatcttaa ctcaataagg aattttacaa
     1321 tttaaattat tttttcacta ttttgtgtgt gtcattgtgt tgtgttgata attcttgata
     1381 ttgtatgtat gaatgttatg taggatagca gctagataga aatgtatcag aggaagcttc
     1441 ctctgttgcg tatttcggaa ccttgataat acattattgc atgaacgtat tgagaagtca
     1501 ggaaagaaac taaactttac aattggtatt tttaacctgt taatcaagaa acttaaatgt
     1561 gttccattta tttcagttaa tcacaatttc ttatatttgt atcatacttg tggcattctt
     1621 tatgttattg cagggacgtg aacgtccaca ttgaggcgat aagaacctga gtcctgttgc
     1681 gagacaaaat aagggtcgtt cgggtagatc aaagaaaaaa gtcactaaaa ggtgcccaaa
     1741 acaggatgtc tcgctcacaa acgaataagg tttagacgaa tctccgtcat cggcgcttct
     1801 gattcgactt cggcttgaga aattttaaat ggattgcgtt gttactttaa taaagcgttg
     1861 ccggcaatgc tttttcacag atgtttttaa caaccaacgt tacaaatgta tgatgaaaga
     1921 agctaacatt tacaaaatag caaacaagtc cagattattg cttgtatact agggccttga
     1981 acgtattagc atatatacta agccatcata t
//
LOCUS       XM_071830542            2081 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alanine--glyoxylate
            aminotransferase 2 homolog 1, mitochondrial-like (LOC139840281),
            transcript variant X4, mRNA.
ACCESSION   XM_071830542
VERSION     XM_071830542.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2081
                     /gene="LOC139840281"
                     /note="alanine--glyoxylate aminotransferase 2 homolog 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840281"
     CDS             780..1196
                     /gene="LOC139840281"
                     /codon_start=1
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     1, mitochondrial-like isoform X1"
                     /protein_id="XP_071686643.1"
                     /db_xref="GeneID:139840281"
                     /translation="MAKGIGNGLPLGAVVTTPEIAQVMSQKLQFNTFGGNPVCSAGGL
                     AVLRVLDKENRQTHCANVGSHLIGRLKDLQQKYEIIGDVRGRGLMVGIELVTDRKEKM
                     PAKAKTAILFEKLRGQQISQKLSLSWYFHVLKNLDN"
     misc_feature    <780..1127
                     /gene="LOC139840281"
                     /note="Acetylornithine aminotransferase/4-aminobutyrate
                     aminotransferase [Amino acid transport and metabolism];
                     Region: ArgD; COG0160"
                     /db_xref="CDD:439930"
ORIGIN      
        1 gtggtgcttc atatgtatat tttatgtaaa tctaattggt gagcatacgt ttgttacaaa
       61 aaccccatga tcaatattcg ttcatgataa tattgatgtt ttctactaac acttactact
      121 atctgaaaat cgcaacattc acaatcattg tatgcaggtt aaaatctttc aataccaaca
      181 agtgtgattg ttgccctaat ttctgtctga aggactaatt aatgttctag tttgtgttgt
      241 tagccctaaa ttatggatga agactaccga aaatccagaa tttttgaatt tagaatacga
      301 ttatgagtgt ttgacctaat tttgggaaga agacgatcag ttcacactac acagtgacaa
      361 ccgagtcaaa atcgacattc aattttactt gaaattgagg gtgaaataca tcatgttgtg
      421 aatccaaatc cgtatcgtgg ggtgtttggg tcggatgcta aaagctatgc gcaagacgta
      481 caagatcaca ttgatcatgg tacttccgga agagttgcag gttttatatc tgaaaccatt
      541 cagggtagtt ttttttttta atgaaaactt gttttaaatt atgatgaact tgtacaatta
      601 cttgtcaagc tagaattttg attgaacttt agtgagttgg gggagcggtt gaattggtcc
      661 cgggattccg taaagcgagt ggtgtatgca ttgccgatga agttcaaacg ggattcggtc
      721 gtacaggaag ccattactgg ggttttcaaa cacaggacgt gattccggat attgttacca
      781 tggcaaaggg aattggaaat ggtttacctt taggagcagt ggttacgact cctgaaatag
      841 cacaagttat gtctcaaaaa ttacaattca acacgtttgg aggtaaccct gtgtgctcgg
      901 ctggtggact tgcggtcctt agggttctcg ataaggaaaa ccgccaaact cattgtgcta
      961 atgttggttc acatttgatc gggcggttga aagatcttca acaaaaatat gaaataatcg
     1021 gtgatgtgag agggaggggg ttgatggttg gcatcgagct tgtaactgac cgtaaagaga
     1081 agatgcctgc taaagccaaa actgccattt tgttcgagaa attacgaggt caacaaatct
     1141 cacaaaagtt gagcttatcg tggtattttc atgtactaaa aaatttagac aattaactca
     1201 atttcggttt atcaactcga tcataggatc taacagtgat ggctttgtta atgagtgagt
     1261 acaattagct tttccaatcc atatctgaag tctttcatct caattctcat ttatcaactc
     1321 ataagatcta acagtaatgg ctttgttaga agtttaaagg tattagaacc atcttaacca
     1381 tcttaactca ataaggaatt ttacaattta aattattttt tcactatttt gtgtgtgtca
     1441 ttgtgttgtg ttgataattc ttgatattgt atgtatgaat gttatgtagg atagcagcta
     1501 gatagaaatg tatcagagga agcttcctct gttgcgtatt tcggaacctt gataatacat
     1561 tattgcatga acgtattgag aagtcaggaa agaaactaaa ctttacaatt ggtattttta
     1621 acctgttaat caagaaactt aaatgtgttc catttatttc agttaatcac aatttcttat
     1681 atttgtatca tacttgtggc attctttatg ttattgcagg gacgtgaacg tccacattga
     1741 ggcgataagg taccatttgt ttcttattgc ataacgtttc ttctgatacg ggtcgaatta
     1801 agtcgggttg ggttaactaa taaatatgta ttctcacaaa atgggcaagt cgggaagaca
     1861 gtgtttaggt ttacctaata aaatagtgat tattatagaa tggtagttca agttgtatgt
     1921 tgaaagaggt tagactagac ctcttgactg tatgtgaaat ttgaggatat ctctctctca
     1981 aatttatatg tatattttcc gaaagcttaa tcatatcaga taccatactt atagcagtac
     2041 catgagttta atgactacta aatatttcac atgctatttt t
//
LOCUS       XR_011757324            1989 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alanine--glyoxylate
            aminotransferase 2 homolog 1, mitochondrial-like (LOC139840281),
            transcript variant X5, misc_RNA.
ACCESSION   XR_011757324
VERSION     XR_011757324.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1989
                     /gene="LOC139840281"
                     /note="alanine--glyoxylate aminotransferase 2 homolog 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840281"
     misc_RNA        1..1989
                     /gene="LOC139840281"
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     1, mitochondrial-like, transcript variant X5"
                     /db_xref="GeneID:139840281"
ORIGIN      
        1 gtggtgcttc atatgtatat tttatgtaaa tctaattggt gagcatacgt ttgttacaaa
       61 aaccccatga tcaatattcg ttcatgataa tattgatgtt ttctactaac acttactact
      121 atctgaaaat cgcaacattc acaatcattg tatgcaggtt aaaatctttc aataccaaca
      181 agtgtgattg ttgccctaat ttctgtctga aggactaatt aatgttctag tttgtgttgt
      241 tagccctaaa ttatggatga agactaccga aaatccagaa tttttgaatt tagaatacga
      301 ttatgagtgt ttgacctaat tttgggaaga agacgatcag ttcacactac acagtgacaa
      361 ccgagtcaaa atcgacattc aattttactt gaaattgagg gtgaaataca tcatgttgtg
      421 aatccaaatc cgtatcgtgg ggtgtttggg tcggatgcta aaagctatgc gcaagacgta
      481 caagatcaca ttgatcatgg tacttccgga agagttgcag gttttatatc tgaaaccatt
      541 cagggtagtt ttttttttta atgaaaactt gttttaaatt atgatgaact tgtacaatta
      601 cttgtcaagc tagaattttg attgaacttt agtgagttgg gggagcggtt gaattggtcc
      661 cgggattccg taaagcgagt ggtgtatgca ttgccgatga agttcaaacg ggattcggtc
      721 gtacaggaag ccattactgg ggttttcaaa cacaggacgt gattccggat attgttacca
      781 tggcaaaggg aattggaaat ggtttacctt taggagcagt ggttacgact cctgaaatag
      841 cacaagttat gtctcaaaaa ttacaattca acacgtttgg aggtaaccct gtgtgctcgg
      901 ctggtggact tgcggtcctt agggttctcg ataaggaaaa ccgccaaact cattgtgcta
      961 atgttggttc acatttgatc gggcggttga aagatcttca acaaaaatat gaaataatcg
     1021 gtgatgtgag agggaggggg ttgatggttg gcatcgagct tgtaactgac cgtaaagaga
     1081 agatgcctgc taaagccaaa actgccattt tgttcgagaa attacgaggt caacaaatct
     1141 cacaaaagtt gagcttatcg tggtattttc atgtactaaa aaatttagac aattaactca
     1201 atttcggttt atcaactcga tcataggatc taacagtgat ggctttgtta atgagtgagt
     1261 acaattagct tttccaatcc atatctgaag tctttcatct caattctcat ttatcaactc
     1321 ataagatcta acagtaatgg ctttgttaga agtttaaagg tattagaacc atcttaacca
     1381 tcttaactca ataaggaatt ttacaattta aattattttt tcactatttt gtgtgtgtca
     1441 ttgtgttgtg ttgataattc ttgatattgt atgtatgaat gttatgtagg atagcagcta
     1501 gatagaaatg tatcagagga agcttcctct gttgcgtatt tcggaacctt gataatacat
     1561 tattgcatga acgtattgag aagtcaggaa agaaactaaa ctttacaatt gggacgtgaa
     1621 cgtccacatt gaggcgataa gaacctgagt cctgttgcga gacaaaataa gggtcgttcg
     1681 ggtagatcaa agaaaaaagt cactaaaagg tgcccaaaac aggatgtctc gctcacaaac
     1741 gaataaggtt tagacgaatc tccgtcatcg gcgcttctga ttcgacttcg gcttgagaaa
     1801 ttttaaatgg attgcgttgt tactttaata aagcgttgcc ggcaatgctt tttcacagat
     1861 gtttttaaca accaacgtta caaatgtatg atgaaagaag ctaacattta caaaatagca
     1921 aacaagtcca gattattgct tgtatactag ggccttgaac gtattagcat atatactaag
     1981 ccatcatat
//
LOCUS       XM_071830544            1502 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alanine--glyoxylate
            aminotransferase 2 homolog 1, mitochondrial-like (LOC139840281),
            transcript variant X6, mRNA.
ACCESSION   XM_071830544
VERSION     XM_071830544.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1502
                     /gene="LOC139840281"
                     /note="alanine--glyoxylate aminotransferase 2 homolog 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840281"
     CDS             776..1132
                     /gene="LOC139840281"
                     /codon_start=1
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     1, mitochondrial-like isoform X2"
                     /protein_id="XP_071686645.1"
                     /db_xref="GeneID:139840281"
                     /translation="MAKGIGNGLPLGAVVTTPEIAQVMSQKLQFNTFGGNPVCSAGGL
                     AVLRVLDKENRQTHCANVGSHLIGRLKDLQQKYEIIGDVRGRGLMVGIELVTDRKEKM
                     PAKAKTAILFEKLRGT"
     misc_feature    <776..1123
                     /gene="LOC139840281"
                     /note="Acetylornithine aminotransferase/4-aminobutyrate
                     aminotransferase [Amino acid transport and metabolism];
                     Region: ArgD; COG0160"
                     /db_xref="CDD:439930"
ORIGIN      
        1 tgcttcatat gtatatttta tgtaaatcta attggtgagc atacgtttgt tacaaaaacc
       61 ccatgatcaa tattcgttca tgataatatt gatgttttct actaacactt actactatct
      121 gaaaatcgca acattcacaa tcattgtatg caggttaaaa tctttcaata ccaacaagtg
      181 tgattgttgc cctaatttct gtctgaagga ctaattaatg ttctagtttg tgttgttagc
      241 cctaaattat ggatgaagac taccgaaaat ccagaatttt tgaatttaga atacgattat
      301 gagtgtttga cctaattttg ggaagaagac gatcagttca cactacacag tgacaaccga
      361 gtcaaaatcg acattcaatt ttacttgaaa ttgagggtga aatacatcat gttgtgaatc
      421 caaatccgta tcgtggggtg tttgggtcgg atgctaaaag ctatgcgcaa gacgtacaag
      481 atcacattga tcatggtact tccggaagag ttgcaggttt tatatctgaa accattcagg
      541 gtagtttttt tttttaatga aaacttgttt taaattatga tgaacttgta caattacttg
      601 tcaagctaga attttgattg aactttagtg agttggggga gcggttgaat tggtcccggg
      661 attccgtaaa gcgagtggtg tatgcattgc cgatgaagtt caaacgggat tcggtcgtac
      721 aggaagccat tactggggtt ttcaaacaca ggacgtgatt ccggatattg ttaccatggc
      781 aaagggaatt ggaaatggtt tacctttagg agcagtggtt acgactcctg aaatagcaca
      841 agttatgtct caaaaattac aattcaacac gtttggaggt aaccctgtgt gctcggctgg
      901 tggacttgcg gtccttaggg ttctcgataa ggaaaaccgc caaactcatt gtgctaatgt
      961 tggttcacat ttgatcgggc ggttgaaaga tcttcaacaa aaatatgaaa taatcggtga
     1021 tgtgagaggg agggggttga tggttggcat cgagcttgta actgaccgta aagagaagat
     1081 gcctgctaaa gccaaaactg ccattttgtt cgagaaatta cgagggacgt gaacgtccac
     1141 attgaggcga taagaacctg agtcctgttg cgagacaaaa taagggtcgt tcgggtagat
     1201 caaagaaaaa agtcactaaa aggtgcccaa aacaggatgt ctcgctcaca aacgaataag
     1261 gtttagacga atctccgtca tcggcgcttc tgattcgact tcggcttgag aaattttaaa
     1321 tggattgcgt tgttacttta ataaagcgtt gccggcaatg ctttttcaca gatgttttta
     1381 acaaccaacg ttacaaatgt atgatgaaag aagctaacat ttacaaaata gcaaacaagt
     1441 ccagattatt gcttgtatac tagggccttg aacgtattag catatatact aagccatcat
     1501 at
//
LOCUS       XR_011757325            1731 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alanine--glyoxylate
            aminotransferase 2 homolog 1, mitochondrial-like (LOC139840281),
            transcript variant X7, misc_RNA.
ACCESSION   XR_011757325
VERSION     XR_011757325.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1731
                     /gene="LOC139840281"
                     /note="alanine--glyoxylate aminotransferase 2 homolog 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840281"
     misc_RNA        1..1731
                     /gene="LOC139840281"
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     1, mitochondrial-like, transcript variant X7"
                     /db_xref="GeneID:139840281"
ORIGIN      
        1 gcttcatatg tatattttat gtaaatctaa ttggtgagca tacgtttgtt acaaaaaccc
       61 catgatcaat attcgttcat gataatattg atgttttcta ctaacactta ctactatctg
      121 aaaatcgcaa cattcacaat cattgtatgc aggttaaaat ctttcaatac caacaagtgt
      181 gattgttgcc ctaatttctg tctgaaggac taattaatgt tctagtttgt gttgttagcc
      241 ctaaattatg gatgaagact accgaaaatc cagaattttt gaatttagaa tacgattatg
      301 agtgtttgac ctaattttgg gaagaagacg atcagttcac actacacagt gacaaccgag
      361 tcaaaatcga cattcaattt tacttgaaat tgagggtgaa atacatcatg ttgtgaatcc
      421 aaatccgtat cgtggggtgt ttgggtcgga tgctaaaagc tatgcgcaag acgtacaaga
      481 tcacattgat catggtactt ccggaagagt tgcaggtttt atatctgaaa ccattcaggg
      541 tagttttttt ttttaatgaa aacttgtttt aaattatgat gaacttgtac aattacttgt
      601 caagctagaa ttttgattga actttagtga gttgggggag cggttgaatt ggtcccggga
      661 ttccgtaaag cgagtggtgt atgcattgcc gatgaagttc aaacgggatt cggtcgtaca
      721 ggaagccatt actggggttt tcaaacacag gacgtgattc cggatattgt taccatggca
      781 aagggaattg gaaatggttt acctttagga gcagtggtta cgactcctga aatagcacaa
      841 gttatgtctc aaaaattaca attcaacacg tttggaggta accctgtgtg ctcggctggt
      901 ggacttgcgg tccttagggt tctcgataag gaaaaccgcc aaactcattg tgctaatgtt
      961 ggttcacatt tgatcgggcg gttgaaagat cttcaacaaa aatatgaaat aatcggtgat
     1021 gtgagaggga gggggttgat ggttggcatc gagcttgtaa ctgaccgtaa agagaagatg
     1081 cctgctaaag ccaaaactgc cattttgttc gagaaattac gaggatagca gctagataga
     1141 aatgtatcag aggaagcttc ctctgttgcg tatttcggaa ccttgataat acattattgc
     1201 atgaacgtat tgagaagtca ggaaagaaac taaactttac aattggtatt tttaacctgt
     1261 taatcaagaa acttaaatgt gttccattta tttcagttaa tcacaatttc ttatatttgt
     1321 atcatacttg tggcattctt tatgttattg cagggacgtg aacgtccaca ttgaggcgat
     1381 aagaacctga gtcctgttgc gagacaaaat aagggtcgtt cgggtagatc aaagaaaaaa
     1441 gtcactaaaa ggtgcccaaa acaggatgtc tcgctcacaa acgaataagg tttagacgaa
     1501 tctccgtcat cggcgcttct gattcgactt cggcttgaga aattttaaat ggattgcgtt
     1561 gttactttaa taaagcgttg ccggcaatgc tttttcacag atgtttttaa caaccaacgt
     1621 tacaaatgta tgatgaaaga agctaacatt tacaaaatag caaacaagtc cagattattg
     1681 cttgtatact agggccttga acgtattagc atatatacta agccatcata t
//
LOCUS       XR_011757326            1599 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alanine--glyoxylate
            aminotransferase 2 homolog 1, mitochondrial-like (LOC139840281),
            transcript variant X8, misc_RNA.
ACCESSION   XR_011757326
VERSION     XR_011757326.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1599
                     /gene="LOC139840281"
                     /note="alanine--glyoxylate aminotransferase 2 homolog 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840281"
     misc_RNA        1..1599
                     /gene="LOC139840281"
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     1, mitochondrial-like, transcript variant X8"
                     /db_xref="GeneID:139840281"
ORIGIN      
        1 gcttcatatg tatattttat gtaaatctaa ttggtgagca tacgtttgtt acaaaaaccc
       61 catgatcaat attcgttcat gataatattg atgttttcta ctaacactta ctactatctg
      121 aaaatcgcaa cattcacaat cattgtatgc aggttaaaat ctttcaatac caacaagtgt
      181 gattgttgcc ctaatttctg tctgaaggac taattaatgt tctagtttgt gttgttagcc
      241 ctaaattatg gatgaagact accgaaaatc cagaattttt gaatttagaa tacgattatg
      301 agtgtttgac ctaattttgg gaagaagacg atcagttcac actacacagt gacaaccgag
      361 tcaaaatcga cattcaattt tacttgaaat tgagggtgaa atacatcatg ttgtgaatcc
      421 aaatccgtat cgtggggtgt ttgggtcgga tgctaaaagc tatgcgcaag acgtacaaga
      481 tcacattgat catggtactt ccggaagagt tgcaggtttt atatctgaaa ccattcaggg
      541 tagttttttt ttttaatgaa aacttgtttt aaattatgat gaacttgtac aattacttgt
      601 caagctagaa ttttgattga actttagtga gttgggggag cggttgaatt ggtcccggga
      661 ttccgtaaag cgagtggtgt atgcattgcc gatgaagttc aaacgggatt cggtcgtaca
      721 ggaagccatt actggggttt tcaaacacag gacgtgattc cggatattgt taccatggca
      781 aagggaattg gaaatggttt acctttagga gcagtggtta cgactcctga aatagcacaa
      841 gttatgtctc aaaaattaca attcaacacg tttggaggta accctgtgtg ctcggctggt
      901 ggacttgcgg tccttagggt tctcgataag gaaaaccgcc aaactcattg tgctaatgtt
      961 ggttcacatt tgatcgggcg gttgaaagat cttcaacaaa aatatgaaat aatcggtgat
     1021 gtgagaggga gggggttgat ggttggcatc gagcttgtaa ctgaccgtaa agagaagatg
     1081 cctgctaaag ccaaaactgc cattttgttc gagaaattac gaggatagca gctagataga
     1141 aatgtatcag aggaagcttc ctctgttgcg tatttcggaa ccttgataat acattattgc
     1201 atgaacgtat tgagaagtca gggacgtgaa cgtccacatt gaggcgataa gaacctgagt
     1261 cctgttgcga gacaaaataa gggtcgttcg ggtagatcaa agaaaaaagt cactaaaagg
     1321 tgcccaaaac aggatgtctc gctcacaaac gaataaggtt tagacgaatc tccgtcatcg
     1381 gcgcttctga ttcgacttcg gcttgagaaa ttttaaatgg attgcgttgt tactttaata
     1441 aagcgttgcc ggcaatgctt tttcacagat gtttttaaca accaacgtta caaatgtatg
     1501 atgaaagaag ctaacattta caaaatagca aacaagtcca gattattgct tgtatactag
     1561 ggccttgaac gtattagcat atatactaag ccatcatat
//
LOCUS       XR_011757327            1928 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840282), transcript variant X1, ncRNA.
ACCESSION   XR_011757327
VERSION     XR_011757327.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1928
                     /gene="LOC139840282"
                     /note="uncharacterized LOC139840282; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840282"
     ncRNA           1..1928
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840282"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840282"
ORIGIN      
        1 tgtttatttg tttaattctt tgtatttata tatggcatat tcatctttat gtatttatat
       61 atgttactta tatgtattct tgcatctttt ctgtcttttt ttaaaaataa ttttataata
      121 agatgatttc aattgatgtg tgaatgatga aaggacgatc caatttaagc aaataaaacc
      181 aaaggtaccc agtttttttt tctttctttg attaatcttt gtataatggt gctgatgaac
      241 tttgttatga attatccaat ttgacggaag cttacgatat tctccaaagt aagttttgta
      301 tcggagaatc atctcgtatt tcttatttag gggtggcaaa atatgatata tttggctgag
      361 attgggtaat ggatcaaaat gggtaacttt tgtacatgtt gggttgaccc gaaacgcgtt
      421 catcttcatt ttctttgtta atgatcttga aatttttgtg tgaaattgta tagtgatttt
      481 tatttttata aatcagacat gattgttgct tctcctctcg gttggatcac tgtgagtatt
      541 tatttttatt gccattcaag ttagcaatat taattattga actatccgta acaaacatac
      601 aaccgtatat tattaacatc cgtgctgctg acgggctcaa tatttctatt tgctaatgtc
      661 atctgtcata atttactcct cgtatttgct aatgtcgttt ttgactaatc tagggtagtt
      721 caatgagaga aggaagtagc caatcaaaga tgtaatcatc tatggcgtat aacgttcctg
      781 aatcatcaat gctgaatccg tttaaatggc tttcacagtc gttgtcacgg tcgtggaatc
      841 caagtacaat agcagattag ggtttcaaat cacattgaag tcatcttgaa atttgatgac
      901 catgttgttt ttcggtcatc ttgaaatttg atgggtgtat gaatggtatt attctatgat
      961 tagttgaacc aaattgggcc agttacagaa ggtataaaag ccatgagaat gtcaaaacgt
     1021 gttggctaat gatatgtgat ttggttgatg atatgtttca ggtggtggag cgaggagctg
     1081 gtatggatgg ccaaaagatc acttacatgt tggtcaagca tcggttgggt ttttattttt
     1141 accgattggt gtaagtggaa ctgccaattt ttcacattat gggtgtattg cgaacctaat
     1201 gaatctgata attggatgat aacaggcctc aaaagttcga agatcctgct gaaggagatg
     1261 attttttgac tggaaacttt aagaagctat atgaagtctt acgtttgttt ttcacaacct
     1321 tgagggtgaa actcggtaaa cacataatga tttactgatg atttgaatat gaaaccgagt
     1381 ggcattttca tcgctcaaga gtcagtcagc tccagcgaaa attttttgtt tcttagtgct
     1441 tgaaggatgg aattcgtctt agaagcgttg aagaacattg ttattgtcga caaaagtagc
     1501 atatcaaagc ggtacttgat ccttaggcac aacaagccac ggcgtaaaag aaaaaaaagt
     1561 ttcggaaaag gagaagccgt caagaaatct gcaactgcat caacgaatat cagtttattt
     1621 accgcggcaa ataagaaaaa aaaaagagtt acttttgttt ttatttgttt gtgttttttc
     1681 attattagcg ttttcttcca gtccgagctt ttgcgatttc tccgctcgga ctgcagggga
     1741 gtgttagacg gattattaat agattggccc aagtccaatt gtggatcgag tccattaggg
     1801 ttttataaaa atattgtact ctataaatag ttattaggat atcaataata ttcaccggtt
     1861 ctatttatta acatgtggat ctggggatat tcggagaatt tttgttaacg ttgtgtacta
     1921 agcggctc
//
LOCUS       XR_011757328            1556 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840282), transcript variant X2, ncRNA.
ACCESSION   XR_011757328
VERSION     XR_011757328.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1556
                     /gene="LOC139840282"
                     /note="uncharacterized LOC139840282; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840282"
     ncRNA           1..1556
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840282"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840282"
ORIGIN      
        1 tgtttatttg tttaattctt tgtatttata tatggcatat tcatctttat gtatttatat
       61 atgttactta tatgtattct tgcatctttt ctgtcttttt ttaaaaataa ttttataata
      121 agatgatttc aattgatgtg tgaatgatga aaggacgatc caatttaagc aaataaaacc
      181 aaaggtaccc agtttttttt tctttctttg attaatcttt gtataatggt gctgatgaac
      241 tttgttatga attatccaat ttgacggaag cttacgatat tctccaaagt aagttttgta
      301 tcggagaatc atctcgtatt tcttatttag gggtggcaaa atatgatata tttggctgag
      361 attgggtaat ggatcaaaat gggtaacttt tgtacatgtt gggttgaccc gaaacgcgtt
      421 catcttcatt ttctttgtta atgatcttga aatttttgtg tgaaattgta tagtgatttt
      481 tatttttata aatcagacat gattgttgct tctcctctcg gttggatcac tgtgagtatt
      541 tatttttatt gccattcaag ttagcaatat taattattga actatccgta acaaacatac
      601 aaccgtatat tattaacatc cgtgctgctg acgggctcaa tatttctatt tgctaatgtc
      661 atctgtcata atttactcct cgtatttgct aatgtcgttt ttgactaatc tagggtagtt
      721 caatgagaga aggaagtagc caatcaaaga tgtaatcatc tatggcgtat aacgttcctg
      781 aatcatcaat gctgaatccg tttaaatggc tttcacagtc gttgtcacgg tcgtggaatc
      841 caagtacaat agcagattag ggtttcaaat cacattgaag tcatcttgaa atttgatgac
      901 catgttgttt ttcggtcatc ttgaaatttg atgggtgtat gaatggtatt attctatgat
      961 tagttgaacc aaattgggcc agttacagaa ggtggtggag cgaggagctg gtatggatgg
     1021 ccaaaagatc acttacatgt tggtcaagca tcggttgggt ttttattttt accgattggt
     1081 gtaagtggaa ctgccaattt ttcacattat gggtgtattg cgaacctaat gaatctgata
     1141 attggatgat aacaggcctc aaaagttcga agatcctgct gaaggagatg attttttgac
     1201 tggaaacttt aagaagctat atgaagtctt acgtttgttt ttcacaacct tgagggtgaa
     1261 actcggtaaa cacataatga tttactgatg atttgaatat gaaaccgagt ggcattttca
     1321 tcgctcaaga gtcagtcagc tccagcgaaa attttttgtt tcttagtgct tgaaggatgg
     1381 aattcgtctt agaaggttag tctcagaact atgttgatgg tactggtcct tatattatta
     1441 ttattggagt actgctcctt atactttctg tattccaaag ttttgaattt ataaatttat
     1501 aaattaaata ataataacag gtttatgcat taaaaaaaat tgcccttaca gttcaa
//
LOCUS       XR_011757329             840 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840283), ncRNA.
ACCESSION   XR_011757329
VERSION     XR_011757329.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..840
                     /gene="LOC139840283"
                     /note="uncharacterized LOC139840283; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840283"
     ncRNA           1..840
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840283"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840283"
ORIGIN      
        1 tacaaatttc gtagagaaat cattcttgca tgttattaaa aatcgattgt acatttgggg
       61 tgaatgttag ggtttgagtg tcattcagaa ttcagataga ttggaatccg attggactcc
      121 aaagaagtgc accatcgcct gaatccgatg atataatcca attattatat cgcttagggt
      181 tttgaaacac gctcacgctc tccattacag agtattatcg atcatcctaa ataaatcgta
      241 tatcaattgc atatcacttg tgaatcagtt tttgatttac ggtttcaaat ttctaagtat
      301 agcttttaat ttgtgaatca gtttttctat aggaaaaatt ttctaaactg ttctagcacc
      361 ccaaactcac aatttttctg atatccgcaa ataaatcggc agaagttttg ggttctagag
      421 ccaattagat cgagaaaagc tctaaagctt gatctgtttg tttcttcgat catgacgcag
      481 tattatgata tcgatgacat tcttgcagat gaagaggttg ggaacttatt tcgttttttt
      541 ttttctattc attttatgat tcaagtttgt tttttgaaga gtccccgtga aacgcacggg
      601 ttctataaat ccagaatatt gaagcaacga tttgaacact attcctcatc ttctaaatta
      661 gggttcttac ttcttccgaa tcaaaagaaa aaaaacggat taaccgattc aatcgaaaaa
      721 aaaccctaaa gtgaatcaat gaccaattca atctttttcc ttgataacca attcaagccg
      781 tacgctgatg ttgatacaca agaatttagg gttctatttg ttacaagagt tttatcatca
//
LOCUS       XM_071830545             706 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NADH dehydrogenase
            [ubiquinone] 1 beta subcomplex subunit 10-B-like (LOC139840284),
            mRNA.
ACCESSION   XM_071830545
VERSION     XM_071830545.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..706
                     /gene="LOC139840284"
                     /note="NADH dehydrogenase [ubiquinone] 1 beta subcomplex
                     subunit 10-B-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139840284"
     CDS             106..414
                     /gene="LOC139840284"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 10-B-like"
                     /protein_id="XP_071686646.1"
                     /db_xref="GeneID:139840284"
                     /translation="MGRKKEVVFDEQPPDFDPANPYKDPVAMIEMREHLVREKWIDIE
                     TSKILRDKLRWCYRIEGVNHLQKCRHLVEQYMDSTRGIGWGKDGRHPDQHGPKVASVE
                     "
     misc_feature    <172..>336
                     /gene="LOC139840284"
                     /note="NADH-ubiquinone oxidoreductase subunit 10; Region:
                     NDUFB10; pfam10249"
                     /db_xref="CDD:431170"
     polyA_site      706
                     /gene="LOC139840284"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cctaccaggc actagctaag gtgcaaataa gaaacaccta tcactagggt atcgtccgaa
       61 acaaataaaa atccccaaat tcacaggcaa tcaatccaaa cgaaaatggg taggaagaag
      121 gaagtagtgt tcgatgaaca accgcccgat ttcgatccgg cgaatccgta caaggatccg
      181 gttgcgatga tcgaaatgag ggaacatctt gttcgtgaga aatggatcga catcgaaacc
      241 tcaaaaatac ttcgcgataa actgcgttgg tgttatcgaa ttgaaggagt taatcatctc
      301 caaaaatgtc gtcatctcgt tgagcagtac atggattcta ctcgtggtat tggttggggt
      361 aaagatggcc gtcatccaga tcaacacggc ccgaaggttg ctagcgtgga gtgattacgg
      421 tggtgttgaa ttgtcttgtg ataatgcatg tacaatttgg aaaggctaga gtttctgaaa
      481 ctagttgtgt gtcttctgtt ttatgttcat gctatgttta acatttgtac tccgtcggat
      541 acttggatcc ggatcctaaa tcatggatct tgaggctata attcgataat aaaaactata
      601 tcatactcta cctctttgat tggtattcat gcaatttcag tttggaatgt gtcaaatttg
      661 ttgtaatgat tatatcttgg gctaatatta tttctactgc aaactc
//
LOCUS       XM_071830546            2170 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At2g33680 (LOC139840285), mRNA.
ACCESSION   XM_071830546
VERSION     XM_071830546.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2170
                     /gene="LOC139840285"
                     /note="pentatricopeptide repeat-containing protein
                     At2g33680; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840285"
     CDS             31..2076
                     /gene="LOC139840285"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At2g33680"
                     /protein_id="XP_071686647.1"
                     /db_xref="GeneID:139840285"
                     /translation="MTTAAPHYRSIFTQFLEYTQQKNIVNGKKLHAHIIKTGSTHCSY
                     ILNSLVNFYAKCHLLPEAHLAFKAIDNKDIVSWNSLINGYSQLGGRHNSVHVMQLFKN
                     LLSEDHSVVIPDARTFAGAFTAASALMDSVGGKQVHTVAFKLGECEDVFVGSSLLNMY
                     CKAGLVDDARKVFDEMPERNSISWATIISGYAMQRICVDALELFKRVVAEENQHVNEF
                     VVTSVLSAFTSPEFVNIGSQIHCLGLKHGLLSHVSVGNAMVTMYSKCGSLDEADKAFE
                     FSSNKNSITWSAMITGDASAIEEGKETHAYSIKLGFQHQIYIMTAVVDMYAKCGFLDD
                     ARKGFDNLQEPDIVLWTSMIGGYVQNGENESALDLFCRMRTEGIYPNELTMASVLKAC
                     SSLAMLEQGKQIHATSIKHGFGLEVPIGSALSNMYTKCGSLKDGDLVFTRMPSRDVVS
                     WNSMISGLAQNGLGNEALELFNKMQIEGTKPDYVTFVNILTACSHMGLVEKGWDYFKM
                     MSNEYGIIPRIDHYACMVDLLSRGGQLNEAKEFIESAPIDHGPCLWRILLSACRNYHN
                     YEIGAYAGEKLMELGSQESSAYVQLSSIYKALGKSKDVERVREMMSQRGVSKEPGCSW
                     IELKSHFHVFVVGDQLHPQVKEIRMEIYRLSKLMKDEGYHPNFDSNFADLEVWDATI"
     misc_feature    109..2073
                     /gene="LOC139840285"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    163..246
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    256..348
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    373..567
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    571..654
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    796..870
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    982..1062
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1075..1158
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1378..1461
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1477..1569
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1585..1659
                     /gene="LOC139840285"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 ttttccggtt gaatagaatt aaaatatttc atgacaaccg cagctccaca ttatcgatca
       61 attttcaccc aattcttgga atacacccaa caaaaaaaca tcgttaatgg taaaaagctc
      121 catgctcaca tcatcaaaac cgggtcaact cactgctcat acatcctcaa ttcactcgtt
      181 aatttctacg ccaaatgcca tcttttaccc gaagctcatc tcgcattcaa agctatcgac
      241 aacaaagaca ttgtttcatg gaactcatta atcaacggct actctcaact cggcggccgt
      301 cacaattccg ttcatgtcat gcaattgttc aagaatttgt tgtctgaaga tcattctgtt
      361 gtaatacccg atgcgcgaac gtttgctggt gcgtttactg ctgcatccgc tttgatggat
      421 tcggttggcg ggaaacaagt tcacacggtt gcatttaagt tgggagaatg tgaggacgtg
      481 tttgttggta gctctttgtt gaatatgtat tgtaaagctg ggttggttga tgatgcacgc
      541 aaggtgtttg atgaaatgcc tgagagaaat tcgatatctt gggcgacgat tatttctggt
      601 tacgcaatgc agaggatttg tgttgatgcg ttggagcttt ttaaaagagt ggtagctgag
      661 gaaaatcagc atgttaatga gtttgttgtg acaagcgttt tgagtgcgtt tacttcgccg
      721 gaatttgtta acattggctc acaaattcat tgccttggac ttaaacatgg gttgttgtct
      781 catgtatctg ttggtaatgc gatggttaca atgtattcaa aatgtggaag cttggatgag
      841 gctgataagg cttttgagtt ttcgagtaat aagaattcga tcacatggtc tgcaatgatt
      901 accggtgatg cttcagctat cgaagagggg aaggagacac atgcgtactc gataaagtta
      961 gggtttcaac atcaaattta tataatgaca gctgtagtcg atatgtatgc taaatgcggt
     1021 ttcttagatg atgctcgaaa ggggtttgat aatttacaag aacctgatat cgtgttgtgg
     1081 acttcaatga ttggtgggta tgttcaaaat ggagaaaacg aaagtgcgtt ggacttgttt
     1141 tgtagaatgc gaacagaagg catatatcca aatgagctaa caatggcaag tgttttaaaa
     1201 gcttgttcaa gtcttgctat gttagaacaa ggaaaacaga tacatgccac tagtattaaa
     1261 catggatttg ggctcgaggt cccaattgga agtgcactct cgaatatgta tactaaatgt
     1321 ggaagcctta aagatgggga tcttgtattt acaagaatgc catcaaggga tgtcgtttct
     1381 tggaactcaa tgatttcggg cctggcccaa aatgggctag gcaatgaagc acttgaattg
     1441 tttaataaaa tgcagattga gggtacaaaa ccggactatg ttacttttgt gaacatttta
     1501 actgcttgta gccacatggg attggtagaa aaagggtggg attattttaa aatgatgtcg
     1561 aatgaatatg gtattattcc tagaattgat cattatgcat gtatggttga tcttttgagt
     1621 cgtggtggac agctcaatga agctaaagaa tttattgaat cagcgcccat tgatcatggt
     1681 ccttgcttat ggcgtatatt attaagtgct tgtaggaatt atcataacta tgaaatagga
     1741 gcgtatgctg gtgagaagtt aatggaattg gggtcacaag aatcttctgc atatgtacaa
     1801 ttatctagta tttataaggc tcttggaaaa tcaaaagatg ttgaacgggt tagagaaatg
     1861 atgagtcagc gtggggtaag taaggagccg gggtgtagct ggattgagct taagagccac
     1921 tttcatgtgt ttgttgttgg agaccagttg catccacaag ttaaagaaat acgtatggag
     1981 atatacaggt tgagtaagct aatgaaagat gaaggttacc accctaattt tgattcaaat
     2041 tttgcagatt tggaagtttg ggatgctaca atttagtata atatgattgg tatacattaa
     2101 acctgaattg ggatgtgagt tttgtaatgt taggtgatat ggggctataa atcatatcca
     2161 gatatgtatt
//
LOCUS       XM_071830547            2020 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840286), mRNA.
ACCESSION   XM_071830547
VERSION     XM_071830547.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2020
                     /gene="LOC139840286"
                     /note="uncharacterized LOC139840286; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139840286"
     CDS             22..1842
                     /gene="LOC139840286"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686648.1"
                     /db_xref="GeneID:139840286"
                     /translation="MLLLKSPSTTVTSSTAVISRTSPATSSHIPLTRSELSSSHRLGQ
                     FCSQQVLSYSSRLNCFRYKATTEAAETMAGSIVTPSASKQALISLSDKKDLDLLATGL
                     QELGYTIVSTGGTASALEKAGIAVTKVEDLTRFPEMLDGRVKTLHPNVHGGILARRDQ
                     SHHMEALEKHSIGTFELVVVNLYPFYEKVTSTNGITFDDGIENIDIGGPTMIRAAAKN
                     HKDVLVVVDSADYVVLLEFLKGNKDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTEG
                     DKFPPSFTVPLSLKSSLRYGENPHQKAAFYTDSSLSEFNGGGIATAIQHHGKEMSYNN
                     YLDADAAWNCVCEFENPTCVVVKHTNPCGVASREDLIEAYRLAVKADPVSAFGGIVAF
                     NKEVGEDLARDIREFRSPTDGETRMFYEIVVAPSYTEKGLEILRGKSKTLRILEAKKN
                     SRGKLSLRQVGGGWLAQDSDDLTPQEIKFDVVSKKVPEKTELDDAKFAWLCVKHVKSN
                     AIVIGKNNCMLGMGSGQPNRVDSLRIAVRKAGDEVKGAALASDAFFPFAWKDAVEEAC
                     ESGIGVIAEPGGSIRDNDAIDCCNKYNVSLVFTGVRHFRH"
     misc_feature    259..1839
                     /gene="LOC139840286"
                     /note="IMP cyclohydrolase; Region: PLN02891"
                     /db_xref="CDD:178479"
ORIGIN      
        1 cacaaaaccc tcgcaaagaa aatgctacta ctgaagtcac cgtcaaccac tgtcacttcc
       61 tcaactgccg taatcagtcg tacatctccg gcgacgtcat cacacattcc gcttacccgt
      121 tccgagctct caagctctca tagacttggc caattttgct ctcaacaggt tctaagttat
      181 tcatcaagat tgaattgttt tcgatataaa gcaacaaccg aagctgctga aaccatggct
      241 ggctctatag ttactccctc tgcaagcaag caagcgttga tttcattgtc agacaagaag
      301 gatctggatc ttcttgccac tggacttcaa gagttgggat acacaatcgt gtcaactgga
      361 ggaacagcat ccgctttgga gaaagctgga atcgctgtaa caaaagtaga agaccttacg
      421 aggttcccag aaatgcttga tggccgcgta aaaacgttac atcctaatgt acatggaggc
      481 attcttgcca gaagagacca aagccatcac atggaagcgt tagaaaagca tagtattggt
      541 acatttgaac tggtggtggt aaatttatat cctttttatg aaaaagttac ttctaccaat
      601 ggaattacat ttgatgatgg aattgaaaac atcgacattg gtggtccgac aatgataaga
      661 gctgcagcaa agaatcacaa ggatgtattg gttgtcgttg attcagcaga ctacgttgta
      721 cttctcgaat tccttaaggg aaacaaggat gaccaacaat ttagaaggaa gctagcttgg
      781 aaagcttttc aacatgttgc ttcttatgac tccgcagttt ctgagtggtt gtggaagcag
      841 actgaaggag ataaattccc acctagcttt acagtgccac tttctctaaa aagttcactt
      901 cgttatggtg aaaatcctca tcaaaaagct gcattttaca ctgatagtag cttgtccgag
      961 tttaacggtg gtggtatcgc aacagctatt caacaccatg ggaaggaaat gtcgtataac
     1021 aattatctgg acgctgatgc agcttggaac tgtgtttgtg agtttgaaaa cccgacatgc
     1081 gttgttgtaa agcacacgaa cccttgtggg gtagcttcac gtgaggatct aattgaagca
     1141 tataggttag ctgtaaaagc tgatcccgta agtgcatttg gtggtatagt agccttcaac
     1201 aaagaagttg gcgaggatct tgctagggat attagggaat tcagaagccc aacagatggt
     1261 gaaactcgaa tgttttacga gattgttgtt gctcctagct atactgaaaa gggtcttgaa
     1321 atcctacgtg gaaagtcaaa gactttgaga attcttgaag cgaagaaaaa cagtagaggg
     1381 aaactgtcac ttagacaagt aggcggtggt tggttagctc aggattcaga cgatctaaca
     1441 ccgcaagaaa ttaaattcga tgtagtttct aaaaaggtcc cagaaaaaac cgaacttgat
     1501 gatgcaaaat ttgcatggtt gtgtgtgaaa catgtcaaaa gcaatgccat tgtaattgga
     1561 aagaacaact gtatgttagg tatgggaagt ggtcaaccaa accgtgtaga cagtttgaga
     1621 atagctgtga gaaaagcagg tgacgaggtc aaaggagctg cgttggctag tgacgcgttt
     1681 ttcccttttg catggaaaga tgcggttgag gaagcttgtg agagcgggat tggtgttatt
     1741 gctgagccag ggggaagcat aagagacaat gatgcaattg actgctgtaa caagtataat
     1801 gtttcgctcg tgttcacagg tgtaaggcac tttcgacatt gaagatcaaa agcttataat
     1861 ttatgtctgt acttggtttt agaatcataa tgctctgtac ttggttttag aatcataatg
     1921 ctctttggaa ttttgagtat aagagctttg ttgtaaaaca ccatgttgaa ctgtgttgta
     1981 gacatcaaga aatcattttt caaacaaaag ttaaaacgtt
//
LOCUS       XM_071830548            1749 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450 81Q32-like
            (LOC139840287), mRNA.
ACCESSION   XM_071830548
VERSION     XM_071830548.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1749
                     /gene="LOC139840287"
                     /note="cytochrome P450 81Q32-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 42
                     Proteins"
                     /db_xref="GeneID:139840287"
     CDS             40..1563
                     /gene="LOC139840287"
                     /codon_start=1
                     /product="cytochrome P450 81Q32-like"
                     /protein_id="XP_071686649.1"
                     /db_xref="GeneID:139840287"
                     /translation="MENLYLYISLLLLTLSYLFISHFRRKSANQPPTIFPSLPIVGHL
                     YLFKPPLYRTLAKLAAKHGPILNLHFGSRNLLIISSPSASEECLTKNDVVFANRPHML
                     FGKIIGNNYTSLAWSPYGDHWRNLRRIASIEILSIHRLNEFHDIRVEEGKLLIRKLIE
                     SSSVNVKAVFYELTLNVMMRMISGKRYFGGDIVAVEEEGKRFREILDETFLLGGAANL
                     GDYLPFLKYFGMNGLEHKLISLRKKRDVFFQGLIEQLREKKGADNDNNDNGIKKKKTM
                     IELLLTLQESDPKYYNDEMIRSFVLVLLSAGTDTSAGTMEWAMSLLLNHPQVLQKAQN
                     EIDRVVGKDRLVDESDIVNLPYLRCIINETLRLYPAGPLLVPHASSEDCVIGGYNVPR
                     GTTLLINQWAIHHDPKLWTNPETFYPERFEGLEGTRDGYKLMPFGSGRRSCPGEGLAV
                     RVMGSTLGLLIQCFNWERLTEKMIDMTEGPGLTMPKAEPLVAKCKPRAEMQSTLAHI"
     misc_feature    226..1509
                     /gene="LOC139840287"
                     /note="cytochrome P450 family 81; Region: CYP81; cd20653"
                     /db_xref="CDD:410746"
     misc_feature    order(331..333,406..408,418..420,442..444,571..573,
                     946..948,955..960,967..972,1147..1149,1159..1164,
                     1168..1170,1342..1353,1360..1374,1381..1386)
                     /gene="LOC139840287"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410746"
     misc_feature    order(664..666,676..678,748..750,943..945,952..957,
                     1162..1164)
                     /gene="LOC139840287"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410746"
     polyA_site      1749
                     /gene="LOC139840287"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caaacaccac cacaaacact aacccaaacc tcataagtaa tggagaacct ttatctctat
       61 atttctctct tacttcttac actttcatac cttttcatat cacatttccg tcgtaaatcc
      121 gctaaccaac caccaacaat cttcccatct ctcccaatcg tcggtcatct ttaccttttc
      181 aaaccacccc tataccgaac tttagctaaa ctcgctgcca aacacggccc aattctcaac
      241 ctccatttcg gctcacgtaa cctcctcatc atctcatcac cttccgcttc agaagaatgc
      301 cttaccaaaa acgacgtcgt tttcgccaac cgtcctcata tgttatttgg caagattatt
      361 ggtaacaact acactagtct cgcgtggtcc ccgtacgggg accactggcg taacttacgc
      421 cgaatcgctt ccattgaaat cttatcgatt catcgactca atgagtttca tgacattcgt
      481 gtagaggaag gaaagctttt gatacgtaaa cttatagaaa gttctagtgt taacgtgaag
      541 gcagtttttt atgaacttac tttgaatgta atgatgcgga tgatatcggg gaaacgatat
      601 tttggtggcg atattgttgc ggttgaagaa gaaggaaaac gatttaggga gattttggat
      661 gagacgtttt tgcttggggg tgctgcaaat ttgggcgatt atttgccgtt tttgaagtat
      721 tttggaatga atggtttaga gcacaagtta atttcgttgc gaaaaaaacg agatgtgttt
      781 tttcaagggt tgattgagca attaagggaa aagaaggggg ctgataatga taataatgat
      841 aatggtatta agaagaagaa gacgatgatt gaattgttgt taacgttaca agaatcggat
      901 cctaaatatt ataatgacga aatgatcaga agctttgtgc tggtactatt atcagctgga
      961 actgatactt ctgctggtac catggaatgg gctatgtcac ttctactaaa tcacccacaa
     1021 gttttacaaa aagcacaaaa cgaaatcgat agagtcgttg gcaaagatcg tctcgttgat
     1081 gagtcagaca tcgtaaacct accttacctc cgttgtatta taaacgagac actacgcttg
     1141 taccctgcag gcccgttact agttccccac gcatcttcag aagattgtgt tattggtggt
     1201 tataacgtcc cacgtgggac cacactactt attaaccaat gggccataca tcatgacccc
     1261 aaattgtgga ccaaccctga aacgttctat cccgaaaggt ttgaaggtct agaaggtaca
     1321 agagatgggt acaagttgat gccatttggg tctggaagaa gaagttgtcc gggtgaaggt
     1381 ttggcggttc gtgtgatggg gtccactttg gggttgctaa ttcagtgttt taattgggaa
     1441 aggttaactg aaaagatgat tgatatgact gaaggtcctg gtcttactat gcctaaagcc
     1501 gaaccattgg tagccaagtg caaaccgcgt gcagagatgc agagtacgct agcccatata
     1561 tgagcttgtt ttgtacattt gttactccaa aataatcctg tgtaagtgaa cagaaagtgc
     1621 gtagtaccaa cacctttatg gttacaaaat catgttaatt cggttgattt gtgcatatgc
     1681 agatgtgtat ggtttatgct tgtgaacgtt ttaacttttg tttgaaaaat gatttcttga
     1741 tgtctacaa
//
LOCUS       XM_071830549            1769 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4/U6 small nuclear
            ribonucleoprotein PRP4-like protein (LOC139840288), transcript
            variant X1, mRNA.
ACCESSION   XM_071830549
VERSION     XM_071830549.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1769
                     /gene="LOC139840288"
                     /note="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139840288"
     CDS             1189..1419
                     /gene="LOC139840288"
                     /codon_start=1
                     /product="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein"
                     /protein_id="XP_071686650.1"
                     /db_xref="GeneID:139840288"
                     /translation="MGQMGMARRKRDASDEDMDVEVNWALENVNTFGLDCSEIGDDRP
                     LLGCSFSCDGKFLATCSRRISVGSAQEGFGSK"
ORIGIN      
        1 tccccttccc ctggtatctt cttccctata tcacactata catatcaaac acctgaaaca
       61 ataaagtcaa cccattcatc atcatcctca tcatcatccg ggaacatatc atcgcctcat
      121 cgtgatcatc gaccgccatc atcatcgtca atatcatcag tcatcatcat catcctcctc
      181 cataatcatc atcaccaaca cccgacatcc tgttatttta ctattttgat cggtttgagt
      241 gtccggtttt gatatgagtt ttgatttgat atggtagcct tcatactttg agaaactatc
      301 aacttgcata tgcccggttc aaagaatgcc gtaatatggt caacaatgag gttgttaatg
      361 aacaattgaa taaacgaaat gagattgaat ggtgattttg gatagatgta tgtcacttat
      421 ggaactgctg aaaacattac aactacccca cctattcaga atggtaattc tttatttact
      481 tataatttca tttgtaattc atgttgttgt catttattat ggatcaacta tgttgtctct
      541 ttttgtttga taaatgctct ttcatgtggc ggtaacaaca agtcaatttg ttgtttattt
      601 acattcgatt gctatttaga gttctgcatt tgcacattgt gttagaggcg tgactacaaa
      661 cgatgaaggt acaacatatt tatggttaaa atgtttactt cttttcaacc ggattatgca
      721 cttactgaat aatttagttt tatggtttta ctccataatc agttttatgg agtaatgtgt
      781 atgaaatcgt tgtctgattt tagtcagcaa ggttcggttt taggtcttca tgatcgcgat
      841 gttgtttcag ttgatctgaa acctatttta aatgaaattc aatttgatca tttaattagt
      901 gaggctcaac aactggatga atcagttgtg aatttgtggt atgtttattt attttccaag
      961 tgttccataa ctttatatat gcattgaacc aaggttcacc taactgatac tccgtaacat
     1021 ctaatgtttt cagttgagat ttttattttt atttatttat ttatttattt ttgctttgca
     1081 tctgatcatg tcgtgctaag tgtatttgca gatttttata tttaacacat tagttataaa
     1141 cgcttaaacg ggtctttcgg gttaaatggt gggttggtaa cctgtcaaat gggtcaaatg
     1201 ggcatggcta ggagaaagag ggatgcttct gatgaggata tggatgttga ggttaattgg
     1261 gcgttagaga atgttaatac ttttgggtta gattgtagtg agattggtga tgatcgacct
     1321 cttttagggt gttcgttttc gtgcgatggc aagtttcttg ctacctgctc aagaaggatt
     1381 tcggttgggt cggctcaaga aggatttggg tccaaatagg ccctgttaag tttgcagtta
     1441 tagagttgtc tcgggcagtg acggatcctt ataacacgat tttgatttca cgttacggac
     1501 tcaaatagaa agcttcaaaa tcatgattcc gagacgacga aggttccatc gatttgaact
     1561 gtaattttag aatctgagcg taaaagaaga cttctgatta tcattgtgat tgtttcgaag
     1621 aaaatcgtca tttgattgtt cggtggttct gttaatcaat tgaaaagtag cgaagtttat
     1681 cgaagaacaa atggatgaat tctaataggt ttcttcttgt tttatgaatt aggtctcttc
     1741 tttgttttat gaattaggaa tttagctaa
//
LOCUS       XM_071830550            2273 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4/U6 small nuclear
            ribonucleoprotein PRP4-like protein (LOC139840288), transcript
            variant X2, mRNA.
ACCESSION   XM_071830550
VERSION     XM_071830550.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2273
                     /gene="LOC139840288"
                     /note="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139840288"
     CDS             1189..1419
                     /gene="LOC139840288"
                     /codon_start=1
                     /product="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein"
                     /protein_id="XP_071686651.1"
                     /db_xref="GeneID:139840288"
                     /translation="MGQMGMARRKRDASDEDMDVEVNWALENVNTFGLDCSEIGDDRP
                     LLGCSFSCDGKFLATCSRRISVGSAQEGFGSK"
ORIGIN      
        1 tccccttccc ctggtatctt cttccctata tcacactata catatcaaac acctgaaaca
       61 ataaagtcaa cccattcatc atcatcctca tcatcatccg ggaacatatc atcgcctcat
      121 cgtgatcatc gaccgccatc atcatcgtca atatcatcag tcatcatcat catcctcctc
      181 cataatcatc atcaccaaca cccgacatcc tgttatttta ctattttgat cggtttgagt
      241 gtccggtttt gatatgagtt ttgatttgat atggtagcct tcatactttg agaaactatc
      301 aacttgcata tgcccggttc aaagaatgcc gtaatatggt caacaatgag gttgttaatg
      361 aacaattgaa taaacgaaat gagattgaat ggtgattttg gatagatgta tgtcacttat
      421 ggaactgctg aaaacattac aactacccca cctattcaga atggtaattc tttatttact
      481 tataatttca tttgtaattc atgttgttgt catttattat ggatcaacta tgttgtctct
      541 ttttgtttga taaatgctct ttcatgtggc ggtaacaaca agtcaatttg ttgtttattt
      601 acattcgatt gctatttaga gttctgcatt tgcacattgt gttagaggcg tgactacaaa
      661 cgatgaaggt acaacatatt tatggttaaa atgtttactt cttttcaacc ggattatgca
      721 cttactgaat aatttagttt tatggtttta ctccataatc agttttatgg agtaatgtgt
      781 atgaaatcgt tgtctgattt tagtcagcaa ggttcggttt taggtcttca tgatcgcgat
      841 gttgtttcag ttgatctgaa acctatttta aatgaaattc aatttgatca tttaattagt
      901 gaggctcaac aactggatga atcagttgtg aatttgtggt atgtttattt attttccaag
      961 tgttccataa ctttatatat gcattgaacc aaggttcacc taactgatac tccgtaacat
     1021 ctaatgtttt cagttgagat ttttattttt atttatttat ttatttattt ttgctttgca
     1081 tctgatcatg tcgtgctaag tgtatttgca gatttttata tttaacacat tagttataaa
     1141 cgcttaaacg ggtctttcgg gttaaatggt gggttggtaa cctgtcaaat gggtcaaatg
     1201 ggcatggcta ggagaaagag ggatgcttct gatgaggata tggatgttga ggttaattgg
     1261 gcgttagaga atgttaatac ttttgggtta gattgtagtg agattggtga tgatcgacct
     1321 cttttagggt gttcgttttc gtgcgatggc aagtttcttg ctacctgctc aagaaggatt
     1381 tcggttgggt cggctcaaga aggatttggg tccaaatagg tcggtttctt agtattatta
     1441 gaaaataata caacttttac tcattattag tattatcaat attattttat caaataaata
     1501 tgtgatacaa agatattttt accacacgta atataattac attaataata catatcacta
     1561 tatttttatg atattaagtg aactttaggt acattttgaa aacactatac tgcacaaata
     1621 cttttctcat tggtaacttc actattttgt ctttctgaac aaggtgtaca tgtaattgtg
     1681 tttactgtaa attggccaac tttaaacgtt gatgcattta ctatggttcg attaaactta
     1741 tatatgtgac attgtgtttg aaaaagtagc aaatgtaaca ttattggtca actttttaaa
     1801 ctatctgcaa ataaagaacc aaattgtgaa tggatctttg ccacgaagac tactggagtt
     1861 acatcttcta tactctgcat attgtggata caatacgctt caacttactt tttgtgtagc
     1921 tataggtagc attttcaact catttaatcg tggacattac aacccatttg atatatttgt
     1981 tggtgaaaca gcatgaagtt gttcacacaa aaatactgaa gcagattagg tttgtttagt
     2041 gagcaccaaa ttcatcttac ctttttggta tgttggtata gaagtgaata gattgaaaca
     2101 tataaaataa tatagggtta gttgatggct ctaattctta atgtttgaag caatatgcac
     2161 tatacatttt tattgtttac atgctaacaa taatgcgaac tatccgttta cttatgtttg
     2221 acttcaaaaa tgataatgat ccattaagaa caagtttgtc tttttttttt tac
//
LOCUS       XR_011757330            1717 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4/U6 small nuclear
            ribonucleoprotein PRP4-like protein (LOC139840288), transcript
            variant X3, misc_RNA.
ACCESSION   XR_011757330
VERSION     XR_011757330.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1717
                     /gene="LOC139840288"
                     /note="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139840288"
     misc_RNA        1..1717
                     /gene="LOC139840288"
                     /product="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein, transcript variant X3"
                     /db_xref="GeneID:139840288"
ORIGIN      
        1 tccccttccc ctggtatctt cttccctata tcacactata catatcaaac acctgaaaca
       61 ataaagtcaa cccattcatc atcatcctca tcatcatccg ggaacatatc atcgcctcat
      121 cgtgatcatc gaccgccatc atcatcgtca atatcatcag tcatcatcat catcctcctc
      181 cataatcatc atcaccaaca cccgacatcc tgttatttta ctattttgat cggtttgagt
      241 gtccggtttt gatatgagtt ttgatttgat atggtagcct tcatactttg agaaactatc
      301 aacttgcata tgcccggttc aaagaatgcc gtaatatggt caacaatgag gttgttaatg
      361 aacaattgaa taaacgaaat gagattgaat ggtgattttg gatagatgta tgtcacttat
      421 ggaactgctg aaaacattac aactacccca cctattcaga atggtaattc tttatttact
      481 tataatttca tttgtaattc atgttgttgt catttattat ggatcaacta tgttgtctct
      541 ttttgtttga taaatgctct ttcatgtggc ggtaacaaca agtcaatttg ttgtttattt
      601 acattcgatt gctatttaga gttctgcatt tgcacattgt gttagaggcg tgactacaaa
      661 cgatgaaggt acaacatatt tatggttaaa atgtttactt cttttcaacc ggattatgca
      721 cttactgaat aatttagttt tatggtttta ctccataatc agttttatgg agtaatgtgt
      781 atgaaatcgt tgtctgattt tagtcagcaa ggttcggttt taggtcttca tgatcgcgat
      841 gttgtttcag ttgatctgaa acctatttta aatgaaattc aatttgatca tttaattagt
      901 gaggctcaac aactggatga atcagttgtg aatttgtggt atgtttattt attttccaag
      961 tgttccataa ctttatatat gcattgaacc aaggttcacc taactgatac tccgtaacat
     1021 ctaatgtttt cagttgagat ttttattttt atttatttat ttatttattt ttgctttgca
     1081 tctgatcatg tcgtgctaag tgtatttgca gatttttata tttaacacat tagttataaa
     1141 cgcttaaacg ggtctttcgg gttaaatggt gggttggtaa cctgtcaaat gggtcaaatg
     1201 ggcatggcta ggagaaagag ggatgcttct gatgaggata tggatgttga ggttaattgg
     1261 gcgttagaga atgttaatac ttttgggtta gattgtagtg agattggtga tgatcgacct
     1321 cttttagggt gttcgttttc gtgcgatggc aagtttcttg ctacctggcc ctgttaagtt
     1381 tgcagttata gagttgtctc gggcagtgac ggatccttat aacacgattt tgatttcacg
     1441 ttacggactc aaatagaaag cttcaaaatc atgattccga gacgacgaag gttccatcga
     1501 tttgaactgt aattttagaa tctgagcgta aaagaagact tctgattatc attgtgattg
     1561 tttcgaagaa aatcgtcatt tgattgttcg gtggttctgt taatcaattg aaaagtagcg
     1621 aagtttatcg aagaacaaat ggatgaattc taataggttt cttcttgttt tatgaattag
     1681 gtctcttctt tgttttatga attaggaatt tagctaa
//
LOCUS       XR_011757331            1787 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4/U6 small nuclear
            ribonucleoprotein PRP4-like protein (LOC139840288), transcript
            variant X4, misc_RNA.
ACCESSION   XR_011757331
VERSION     XR_011757331.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1787
                     /gene="LOC139840288"
                     /note="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139840288"
     misc_RNA        1..1787
                     /gene="LOC139840288"
                     /product="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein, transcript variant X4"
                     /db_xref="GeneID:139840288"
ORIGIN      
        1 tccccttccc ctggtatctt cttccctata tcacactata catatcaaac acctgaaaca
       61 ataaagtcaa cccattcatc atcatcctca tcatcatccg ggaacatatc atcgcctcat
      121 cgtgatcatc gaccgccatc atcatcgtca atatcatcag tcatcatcat catcctcctc
      181 cataatcatc atcaccaaca cccgacatcc tgttatttta ctattttgat cggtttgagt
      241 gtccggtttt gatatgagtt ttgatttgat atggtagcct tcatactttg agaaactatc
      301 aacttgcata tgcccggttc aaagaatgcc gtaatatggt caacaatgag gtactttgga
      361 ttgaaagcgg gtggcatctt attttatcga ttgatatgaa atgtcgattg ggatgtgcag
      421 gttgttaatg aacaattgaa taaacgaaat gagattgaat ggtgattttg gatagatgta
      481 tgtcacttat ggaactgctg aaaacattac aactacccca cctattcaga atggtaattc
      541 tttatttact tataatttca tttgtaattc atgttgttgt catttattat ggatcaacta
      601 tgttgtctct ttttgtttga taaatgctct ttcatgtggc ggtaacaaca agtcaatttg
      661 ttgtttattt acattcgatt gctatttaga gttctgcatt tgcacattgt gttagaggcg
      721 tgactacaaa cgatgaaggt acaacatatt tatggttaaa atgtttactt cttttcaacc
      781 ggattatgca cttactgaat aatttagttt tatggtttta ctccataatc agttttatgg
      841 agtaatgtgt atgaaatcgt tgtctgattt tagtcagcaa ggttcggttt taggtcttca
      901 tgatcgcgat gttgtttcag ttgatctgaa acctatttta aatgaaattc aatttgatca
      961 tttaattagt gaggctcaac aactggatga atcagttgtg aatttgtggt atgtttattt
     1021 attttccaag tgttccataa ctttatatat gcattgaacc aaggttcacc taactgatac
     1081 tccgtaacat ctaatgtttt cagttgagat ttttattttt atttatttat ttatttattt
     1141 ttgctttgca tctgatcatg tcgtgctaag tgtatttgca gatttttata tttaacacat
     1201 tagttataaa cgcttaaacg ggtctttcgg gttaaatggt gggttggtaa cctgtcaaat
     1261 gggtcaaatg ggcatggcta ggagaaagag ggatgcttct gatgaggata tggatgttga
     1321 ggttaattgg gcgttagaga atgttaatac ttttgggtta gattgtagtg agattggtga
     1381 tgatcgacct cttttagggt gttcgttttc gtgcgatggc aagtttcttg ctacctggcc
     1441 ctgttaagtt tgcagttata gagttgtctc gggcagtgac ggatccttat aacacgattt
     1501 tgatttcacg ttacggactc aaatagaaag cttcaaaatc atgattccga gacgacgaag
     1561 gttccatcga tttgaactgt aattttagaa tctgagcgta aaagaagact tctgattatc
     1621 attgtgattg tttcgaagaa aatcgtcatt tgattgttcg gtggttctgt taatcaattg
     1681 aaaagtagcg aagtttatcg aagaacaaat ggatgaattc taataggttt cttcttgttt
     1741 tatgaattag gtctcttctt tgttttatga attaggaatt tagctaa
//
LOCUS       XR_011757332            1598 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4/U6 small nuclear
            ribonucleoprotein PRP4-like protein (LOC139840288), transcript
            variant X5, misc_RNA.
ACCESSION   XR_011757332
VERSION     XR_011757332.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1598
                     /gene="LOC139840288"
                     /note="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139840288"
     misc_RNA        1..1598
                     /gene="LOC139840288"
                     /product="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein, transcript variant X5"
                     /db_xref="GeneID:139840288"
ORIGIN      
        1 tccccttccc ctggtatctt cttccctata tcacactata catatcaaac acctgaaaca
       61 ataaagtcaa cccattcatc atcatcctca tcatcatccg ggaacatatc atcgcctcat
      121 cgtgatcatc gaccgccatc atcatcgtca atatcatcag tcatcatcat catcctcctc
      181 cataatcatc atcaccaaca cccgacatcc tgttatttta ctattttgat cggtttgagt
      241 gtccggtttt gatatgagtt ttgatttgat atggtagcct tcatactttg agaaactatc
      301 aacttgcata tgcccggttc aaagaatgcc gtaatatggt caacaatgag gttgttaatg
      361 aacaattgaa taaacgaaat gagattgaat ggtgattttg gatagatgta tgtcacttat
      421 ggaactgctg aaaacattac aactacccca cctattcaga atgtcaattt gttgtttatt
      481 tacattcgat tgctatttag agttctgcat ttgcacattg tgttagaggc gtgactacaa
      541 acgatgaagg tacaacatat ttatggttaa aatgtttact tcttttcaac cggattatgc
      601 acttactgaa taatttagtt ttatggtttt actccataat cagttttatg gagtaatgtg
      661 tatgaaatcg ttgtctgatt ttagtcagca aggttcggtt ttaggtcttc atgatcgcga
      721 tgttgtttca gttgatctga aacctatttt aaatgaaatt caatttgatc atttaattag
      781 tgaggctcaa caactggatg aatcagttgt gaatttgtgg tatgtttatt tattttccaa
      841 gtgttccata actttatata tgcattgaac caaggttcac ctaactgata ctccgtaaca
      901 tctaatgttt tcagttgaga tttttatttt tatttattta tttatttatt tttgctttgc
      961 atctgatcat gtcgtgctaa gtgtatttgc agatttttat atttaacaca ttagttataa
     1021 acgcttaaac gggtctttcg ggttaaatgg tgggttggta acctgtcaaa tgggtcaaat
     1081 gggcatggct aggagaaaga gggatgcttc tgatgaggat atggatgttg aggttaattg
     1141 ggcgttagag aatgttaata cttttgggtt agattgtagt gagattggtg atgatcgacc
     1201 tcttttaggg tgttcgtttt cgtgcgatgg caagtttctt gctacctggc cctgttaagt
     1261 ttgcagttat agagttgtct cgggcagtga cggatcctta taacacgatt ttgatttcac
     1321 gttacggact caaatagaaa gcttcaaaat catgattccg agacgacgaa ggttccatcg
     1381 atttgaactg taattttaga atctgagcgt aaaagaagac ttctgattat cattgtgatt
     1441 gtttcgaaga aaatcgtcat ttgattgttc ggtggttctg ttaatcaatt gaaaagtagc
     1501 gaagtttatc gaagaacaaa tggatgaatt ctaataggtt tcttcttgtt ttatgaatta
     1561 ggtctcttct ttgttttatg aattaggaat ttagctaa
//
LOCUS       XR_011757333            1274 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4/U6 small nuclear
            ribonucleoprotein PRP4-like protein (LOC139840288), transcript
            variant X6, misc_RNA.
ACCESSION   XR_011757333
VERSION     XR_011757333.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1274
                     /gene="LOC139840288"
                     /note="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139840288"
     misc_RNA        1..1274
                     /gene="LOC139840288"
                     /product="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein, transcript variant X6"
                     /db_xref="GeneID:139840288"
ORIGIN      
        1 tccccttccc ctggtatctt cttccctata tcacactata catatcaaac acctgaaaca
       61 ataaagtcaa cccattcatc atcatcctca tcatcatccg ggaacatatc atcgcctcat
      121 cgtgatcatc gaccgccatc atcatcgtca atatcatcag tcatcatcat catcctcctc
      181 cataatcatc atcaccaaca cccgacatcc tgttatttta ctattttgat cggtttgagt
      241 gtccggtttt gatatgagtt ttgatttgat atggtagcct tcatactttg agaaactatc
      301 aacttgcata tgcccggttc aaagaatgcc gtaatatggt caacaatgag gttgttaatg
      361 aacaattgaa taaacgaaat gagattgaat ggtgattttg gatagatgta tgtcacttat
      421 ggaactgctg aaaacattac aactacccca cctattcaga atggtaattc tttatttact
      481 tataatttca tttgtaattc atgttgttgt catttattat ggatcaacta tgttgtctct
      541 ttttgtttga taaatgctct ttcatgtggc ggtaacaaca agtcaatttg ttgtttattt
      601 acattcgatt gctatttaga gttctgcatt tgcacattgt gttagaggcg tgactacaaa
      661 cgatgaagat ttttatattt aacacattag ttataaacgc ttaaacgggt ctttcgggtt
      721 aaatggtggg ttggtaacct gtcaaatggg tcaaatgggc atggctagga gaaagaggga
      781 tgcttctgat gaggatatgg atgttgaggt taattgggcg ttagagaatg ttaatacttt
      841 tgggttagat tgtagtgaga ttggtgatga tcgacctctt ttagggtgtt cgttttcgtg
      901 cgatggcaag tttcttgcta cctggccctg ttaagtttgc agttatagag ttgtctcggg
      961 cagtgacgga tccttataac acgattttga tttcacgtta cggactcaaa tagaaagctt
     1021 caaaatcatg attccgagac gacgaaggtt ccatcgattt gaactgtaat tttagaatct
     1081 gagcgtaaaa gaagacttct gattatcatt gtgattgttt cgaagaaaat cgtcatttga
     1141 ttgttcggtg gttctgttaa tcaattgaaa agtagcgaag tttatcgaag aacaaatgga
     1201 tgaattctaa taggtttctt cttgttttat gaattaggtc tcttctttgt tttatgaatt
     1261 aggaatttag ctaa
//
LOCUS       XR_011757334            1155 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U4/U6 small nuclear
            ribonucleoprotein PRP4-like protein (LOC139840288), transcript
            variant X7, misc_RNA.
ACCESSION   XR_011757334
VERSION     XR_011757334.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139840288"
                     /note="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139840288"
     misc_RNA        1..1155
                     /gene="LOC139840288"
                     /product="U4/U6 small nuclear ribonucleoprotein PRP4-like
                     protein, transcript variant X7"
                     /db_xref="GeneID:139840288"
ORIGIN      
        1 tccccttccc ctggtatctt cttccctata tcacactata catatcaaac acctgaaaca
       61 ataaagtcaa cccattcatc atcatcctca tcatcatccg ggaacatatc atcgcctcat
      121 cgtgatcatc gaccgccatc atcatcgtca atatcatcag tcatcatcat catcctcctc
      181 cataatcatc atcaccaaca cccgacatcc tgttatttta ctattttgat cggtttgagt
      241 gtccggtttt gatatgagtt ttgatttgat atggtagcct tcatactttg agaaactatc
      301 aacttgcata tgcccggttc aaagaatgcc gtaatatggt caacaatgag gttgttaatg
      361 aacaattgaa taaacgaaat gagattgaat ggtgattttg gatagatgta tgtcacttat
      421 ggaactgctg aaaacattac aactacccca cctattcaga atgtcaattt gttgtttatt
      481 tacattcgat tgctatttag agttctgcat ttgcacattg tgttagaggc gtgactacaa
      541 acgatgaaga tttttatatt taacacatta gttataaacg cttaaacggg tctttcgggt
      601 taaatggtgg gttggtaacc tgtcaaatgg gtcaaatggg catggctagg agaaagaggg
      661 atgcttctga tgaggatatg gatgttgagg ttaattgggc gttagagaat gttaatactt
      721 ttgggttaga ttgtagtgag attggtgatg atcgacctct tttagggtgt tcgttttcgt
      781 gcgatggcaa gtttcttgct acctggccct gttaagtttg cagttataga gttgtctcgg
      841 gcagtgacgg atccttataa cacgattttg atttcacgtt acggactcaa atagaaagct
      901 tcaaaatcat gattccgaga cgacgaaggt tccatcgatt tgaactgtaa ttttagaatc
      961 tgagcgtaaa agaagacttc tgattatcat tgtgattgtt tcgaagaaaa tcgtcatttg
     1021 attgttcggt ggttctgtta atcaattgaa aagtagcgaa gtttatcgaa gaacaaatgg
     1081 atgaattcta ataggtttct tcttgtttta tgaattaggt ctcttctttg ttttatgaat
     1141 taggaattta gctaa
//
LOCUS       XM_071830551            2100 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840289), mRNA.
ACCESSION   XM_071830551
VERSION     XM_071830551.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2100
                     /gene="LOC139840289"
                     /note="uncharacterized LOC139840289; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139840289"
     CDS             26..1729
                     /gene="LOC139840289"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686652.1"
                     /db_xref="GeneID:139840289"
                     /translation="MTDTQPPPEQPSTPSQPQNLYIHPRREPFEHGLIPLQKLIFTDG
                     SQTLTSIRDKLLQSHPPNNRINSVIISETLTISPEHARLVIDIISSVLHSDSDPLVTA
                     KADEVDSVGVNVYDLIIFLYIQSYKRLLPKGHKDSAAVADVWPSTSAFDGFLSALTPL
                     QLVRSNSRRSMPSQANEEAHQLSYLQKHLGNIISLLADPLEGEGEDSLVLTMEKFEHL
                     GFLIYFGENGLEKAPLSQNAPFFANSDPDMPAAPVPASQVHDWILQNISDALDRISDK
                     VSAKENGQTSPSSDQDVLMTDASPSFKASTSAKGPSYIEGISKQSYVKQASELQGSFV
                     KVINCHESVIYVLAPLKFATIYGCSDATIVLGAVGKAVRIEHCERVHVISAAKRICIA
                     NCRECLFFLGVNQQPLIVGDNHKLQIAPYNTYYPQLEEHMKQVGIETTPNRWGEPVAL
                     GLIDPHDSHSHPAGVSDCQAETATHLDPDHFTNFLIPNWLEGDSSGSTKDNPFQLPDI
                     YLSCQRRNENNLFEVKQMLREAPLEDIRKKELSSALHAYFKDWLYASGNIRQLYCLQG
                     E"
     misc_feature    1016..1357
                     /gene="LOC139840289"
                     /note="Tubulin binding cofactor C; Region: TBCC;
                     pfam07986"
                     /db_xref="CDD:462331"
ORIGIN      
        1 gtttccctcc cccaaattca ccaccatgac agacacacaa ccaccgccgg agcaaccatc
       61 aacaccgtcg caaccacaaa acctatacat acacccccgc cgtgaaccat tcgaacacgg
      121 cctaattccc ttacaaaaac tcattttcac cgacggttca caaaccctaa cttccattcg
      181 tgacaaatta cttcaatcac atccgccaaa taaccgaatt aactctgtta tcatatctga
      241 aaccctaacg atctcaccgg agcacgcacg ccttgtaatt gatataattt cgtccgttct
      301 tcattcggat tccgatccac ttgttaccgc gaaagctgat gaggttgatt ccgttggtgt
      361 aaatgtatat gatctgatta tatttttgta tatacagtcg tacaaacgtt tgcttcctaa
      421 aggtcataag gattctgctg ctgtggctga tgtttggcct tctacttctg cttttgatgg
      481 atttttatct gctcttacgc ctttacagct tgtgcgcagc aatagtcgga ggtctatgcc
      541 atcacaagcc aatgaagagg cccatcagtt atcttactta caaaagcatt tgggcaacat
      601 aatctctctt ttggctgacc ctctcgaagg tgaaggggaa gattcactgg ttttgacaat
      661 ggagaagttt gagcatcttg gatttttgat ctactttggt gaaaatggat tggagaaagc
      721 tccattgagt caaaatgcac cattttttgc aaattcagat cctgatatgc ctgctgcacc
      781 tgttcctgca tctcaagttc atgattggat tttacaaaat atttctgatg cattggatcg
      841 aatctctgat aaagtttctg caaaagagaa tggtcaaact agtccttctt ctgatcagga
      901 tgttttaatg actgatgcct ctcctagttt taaggcatct actagcgcca aggggcccag
      961 ttatatagag gggatttcta aacaatcata tgtaaagcaa gccagtgaac ttcaaggatc
     1021 atttgtaaag gttataaatt gtcatgaatc tgtgatttat gtcttagctc ctttgaaatt
     1081 cgccaccata tatggatgct ctgatgctac tatagttcta ggtgctgttg gaaaggctgt
     1141 aagaatcgaa cactgtgaga gggttcatgt gatttcggct gcaaagcgaa tatgcattgc
     1201 taattgtcgt gaatgtttat tctttttggg tgtaaaccaa caacccctta ttgttggtga
     1261 caaccataag ctccagatcg caccgtataa tacatattac ccacaattgg aggaacacat
     1321 gaaacaagta ggtatcgaaa ctactccaaa cagatggggt gagcctgttg cattgggtct
     1381 aattgatcca cacgattcac attctcatcc agctggcgta tccgattgtc aagctgaaac
     1441 cgctactcac ttagaccctg atcactttac aaacttcttg attcctaact ggttagaagg
     1501 tgactcatct gggtccacaa aagataatcc gtttcaactt cctgatatct acttgtcatg
     1561 tcagcgacga aatgagaata atttatttga ggttaagcag atgctgagag aagcaccgtt
     1621 ggaagatatt agaaaaaagg aattgtcgag tgcacttcat gcttacttta aagactggtt
     1681 atatgcctca ggtaacatta gacaactata ttgcctgcaa ggtgagtagc aatttgaagt
     1741 atagttgcaa tcaagtaaag gatataaaac tctcaatgaa ggaaagttat tattgccatt
     1801 tacgttggtg ctgcaacaag ttcagaaatt tgagttgcag tttcatatgt aatgttttgc
     1861 taactctttg gccctcttga tgaatagaat aaaaacgtta atgttttgac ttgtttagag
     1921 ttttcaaggt ttggtctgtg ttcaaaacat atatcttcat tcgtttcaag gtgagctgct
     1981 gtctgagttt tgtggtagta aataaatgtg agcagcttat gcatattagt agtatatcag
     2041 gtaggcaagt tgccataatg tcttgttttg tgaacaaaag caataatatc atgttgatta
//
LOCUS       XM_071830552            1063 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 25.3 kDa vesicle transport
            protein SEC22-1 (LOC139840290), transcript variant X1, mRNA.
ACCESSION   XM_071830552
VERSION     XM_071830552.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1063
                     /gene="LOC139840290"
                     /note="25.3 kDa vesicle transport protein SEC22-1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840290"
     CDS             225..881
                     /gene="LOC139840290"
                     /codon_start=1
                     /product="25.3 kDa vesicle transport protein SEC22-1"
                     /protein_id="XP_071686653.1"
                     /db_xref="GeneID:139840290"
                     /translation="MVKLTMIARVTDGLPLAEGLDDGRDLQDAEFYKQQVKALFKNLS
                     RGQNEASRMSVETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERGYGN
                     QIETAARPYAFIKFDTFIQRTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGV
                     GEKLDQVSQMSSRLTSESRIYADKAKDLNRQALIKKWAPVAIVLGVVIFLFWVRKKIW
                     "
     misc_feature    237..605
                     /gene="LOC139840290"
                     /note="longin domain; Region: Longin; cd14824"
                     /db_xref="CDD:341428"
     misc_feature    order(267..269,276..278,282..284,321..323,333..335,
                     576..578,588..590,597..599)
                     /gene="LOC139840290"
                     /note="Sec22 interface [polypeptide binding]; other site"
                     /db_xref="CDD:341428"
     misc_feature    order(318..320,327..329,393..395,402..404,408..410)
                     /gene="LOC139840290"
                     /note="lipid binding site [chemical binding];
                     lipid-binding site"
                     /db_xref="CDD:341428"
     misc_feature    order(390..392,399..401,459..461,471..473)
                     /gene="LOC139840290"
                     /note="VARP interface [polypeptide binding]; other site"
                     /db_xref="CDD:341428"
     misc_feature    621..812
                     /gene="LOC139840290"
                     /note="SNARE motif of SEC22; Region: R-SNARE_SEC22;
                     cd15866"
                     /db_xref="CDD:277219"
     misc_feature    order(627..635,639..644,648..665,669..677,681..683,
                     690..695,699..707,711..728,732..749,753..770,774..791,
                     795..803)
                     /gene="LOC139840290"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277219"
     misc_feature    702..704
                     /gene="LOC139840290"
                     /note="zero layer; other site"
                     /db_xref="CDD:277219"
ORIGIN      
        1 aatttatcga tcaccatcct tacaaaaccc taaattttac tccgaataaa aaaaaaatac
       61 tattttcttc aattctattc cagtttctcc ctttttttgt acatcaattt tacatccgta
      121 taaacaccga gcactataag atcggatctt ccataatcca tacgcagagt cgcatgataa
      181 tttcttgatt ttcccattta agttgacagc ttctcaaaat aaagatggtg aagctgacca
      241 tgattgcacg tgtcaccgac ggtcttccgc tagctgaggg attggatgat ggacgtgatt
      301 tgcaagatgc ggagttctac aaacagcaag tcaaggcatt gttcaagaac ctgtcaaggg
      361 gacaaaatga agcttcaaga atgtctgttg aaactggccc ttacgtcttc cactatatta
      421 ttgaagggcg ggtatgctac ttaacaatgt gtgatcgagc ttatcctaag aaacttgctt
      481 ttcaatatct cgaagatctt aagaacgaat ttgagcgtgg ttatgggaat caaattgaaa
      541 ctgctgcaag accatatgct ttcataaaat ttgatacttt tatacagagg actaagaaat
      601 tgtaccagga cacaagaact cagaggaaca tttctaagtt gaatgatgaa ctttatgaag
      661 ttcaccaaat aatgactcgt aatgtacaag aagtccttgg tgttggtgaa aaattggacc
      721 aggtcagtca gatgtcaagt cggttaacat cagaatctcg catatatgct gataaagcaa
      781 aagatctgaa ccgacaggct ctgatcaaga aatgggcacc tgttgcaatt gttcttggag
      841 ttgttatttt cctgttctgg gtcagaaaga agatatggtg atcccccatg gctttgtttt
      901 gttgtataca acaaatagta ttgtcttatt tctccgagtt taaattagtt atccttgcaa
      961 catctaaact ggaaattttt gtactgagaa gcattcagac acttttgtgt cactttatgc
     1021 atgaatttct tcttatatct gtaatgttaa tcaacatttc ctt
//
LOCUS       XM_071830553            1056 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 25.3 kDa vesicle transport
            protein SEC22-1 (LOC139840290), transcript variant X2, mRNA.
ACCESSION   XM_071830553
VERSION     XM_071830553.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1056
                     /gene="LOC139840290"
                     /note="25.3 kDa vesicle transport protein SEC22-1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840290"
     CDS             218..874
                     /gene="LOC139840290"
                     /codon_start=1
                     /product="25.3 kDa vesicle transport protein SEC22-1"
                     /protein_id="XP_071686654.1"
                     /db_xref="GeneID:139840290"
                     /translation="MVKLTMIARVTDGLPLAEGLDDGRDLQDAEFYKQQVKALFKNLS
                     RGQNEASRMSVETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERGYGN
                     QIETAARPYAFIKFDTFIQRTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGV
                     GEKLDQVSQMSSRLTSESRIYADKAKDLNRQALIKKWAPVAIVLGVVIFLFWVRKKIW
                     "
     misc_feature    230..598
                     /gene="LOC139840290"
                     /note="longin domain; Region: Longin; cd14824"
                     /db_xref="CDD:341428"
     misc_feature    order(260..262,269..271,275..277,314..316,326..328,
                     569..571,581..583,590..592)
                     /gene="LOC139840290"
                     /note="Sec22 interface [polypeptide binding]; other site"
                     /db_xref="CDD:341428"
     misc_feature    order(311..313,320..322,386..388,395..397,401..403)
                     /gene="LOC139840290"
                     /note="lipid binding site [chemical binding];
                     lipid-binding site"
                     /db_xref="CDD:341428"
     misc_feature    order(383..385,392..394,452..454,464..466)
                     /gene="LOC139840290"
                     /note="VARP interface [polypeptide binding]; other site"
                     /db_xref="CDD:341428"
     misc_feature    614..805
                     /gene="LOC139840290"
                     /note="SNARE motif of SEC22; Region: R-SNARE_SEC22;
                     cd15866"
                     /db_xref="CDD:277219"
     misc_feature    order(620..628,632..637,641..658,662..670,674..676,
                     683..688,692..700,704..721,725..742,746..763,767..784,
                     788..796)
                     /gene="LOC139840290"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277219"
     misc_feature    695..697
                     /gene="LOC139840290"
                     /note="zero layer; other site"
                     /db_xref="CDD:277219"
ORIGIN      
        1 aatttatcga tcaccatcct tacaaaaccc taaattttac tccgaataaa aaaaaaatac
       61 tattttcttc aattctattc cagtttctcc ctttttttgt acatcaattt tacatccgta
      121 taaacaccga gcactataag atcggatctt ccataatcca tacgcagagt cgcatgataa
      181 tttcttgatt ttcccattta agcttctcaa aataaagatg gtgaagctga ccatgattgc
      241 acgtgtcacc gacggtcttc cgctagctga gggattggat gatggacgtg atttgcaaga
      301 tgcggagttc tacaaacagc aagtcaaggc attgttcaag aacctgtcaa ggggacaaaa
      361 tgaagcttca agaatgtctg ttgaaactgg cccttacgtc ttccactata ttattgaagg
      421 gcgggtatgc tacttaacaa tgtgtgatcg agcttatcct aagaaacttg cttttcaata
      481 tctcgaagat cttaagaacg aatttgagcg tggttatggg aatcaaattg aaactgctgc
      541 aagaccatat gctttcataa aatttgatac ttttatacag aggactaaga aattgtacca
      601 ggacacaaga actcagagga acatttctaa gttgaatgat gaactttatg aagttcacca
      661 aataatgact cgtaatgtac aagaagtcct tggtgttggt gaaaaattgg accaggtcag
      721 tcagatgtca agtcggttaa catcagaatc tcgcatatat gctgataaag caaaagatct
      781 gaaccgacag gctctgatca agaaatgggc acctgttgca attgttcttg gagttgttat
      841 tttcctgttc tgggtcagaa agaagatatg gtgatccccc atggctttgt tttgttgtat
      901 acaacaaata gtattgtctt atttctccga gtttaaatta gttatccttg caacatctaa
      961 actggaaatt tttgtactga gaagcattca gacacttttg tgtcacttta tgcatgaatt
     1021 tcttcttata tctgtaatgt taatcaacat ttcctt
//
LOCUS       XM_071830554            2703 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840291), mRNA.
ACCESSION   XM_071830554
VERSION     XM_071830554.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2703
                     /gene="LOC139840291"
                     /note="uncharacterized LOC139840291; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840291"
     CDS             112..2703
                     /gene="LOC139840291"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1879..1881,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: uncharacterized protein"
                     /protein_id="XP_071686655.1"
                     /db_xref="GeneID:139840291"
                     /translation="MSTLKITKKHNKHLNNPFPSNPKSIPFKQGTLFLHSQTTFSSHQ
                     IFSFGNDFELKWRSENGGHVSISHNSQPTRSIWSTIPGQSFISTAMAETEVEESRGSF
                     IIKDRNVRLVCDHQTIDEIKVFKSQNDINFQEKDQDFVSGYDEIGSQFPVLEIKGRIF
                     SMRKNKKGSNGEKWELLEKDVHSYVKYKFLLEQKSSNQIRFQVKLGKLNLGSSPKLSP
                     RSYKGLVKKSSRTRKIRLRLFGSISKRKRVVMDPSNEEENVAMRDGGYECFNRICLTY
                     SSEKNERFFGFGEQFSHMDFKGRKVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWST
                     TYAPSPFYLTSKMKSLYLEGYDYSVFDLTHDDRVQIQIHGDSIEGRILHGNSPSELIE
                     QFTESIGRPPELPDWIISGAVVGMQGGTDKVRHVWEELVARDVPISAFWLQDWVGERK
                     TVIGSQLWWNWEVDETRYQGWKQLINDLSARHIKVMTYCNPCLAPVESKPDAKRNLFE
                     EAKKLDILVKDKNGKAYMVPNTAFDVGMLDLTHPNTANWFKKILREMVDDGVRGWMAD
                     FGEGLPVDACIYSGEDPISAHNRXPEIWAQINREFTEEWKSTLTGKEKEDPSEFLVFF
                     MRAGFRNSPKWAMLFWEGDQMVSWQANDGIKSAVVGLLSSGLCGYAFNHSDIGGYCAV
                     NLPFLKYKRDEELLLRWMELNAFTTIFRTHEGNKPSVNSQFYSNEATLSHFARFAKVY
                     KAWKFYRIQLVKEASQKGLPVCRHLFLHYPNDDHVHNLTYEQFLVGDEFLVVPTLDKH
                     RKSVKAYFPVGEKCVWKHIWTGDLYDIQGSEALIDAPIGYPAVFVKNGSIVGETFLKN
                     LREYKIM"
     misc_feature    919..2670
                     /gene="LOC139840291"
                     /note="alpha-glucosidase; Provisional; Region: PRK10426"
                     /db_xref="CDD:236691"
ORIGIN      
        1 aaatcaacaa gtatgaatgc ttgaacctaa ttttggctgt tcaaaagata gccagacggc
       61 tctaaatatc aaacttttca agattcacca cccaatttca aaactaaaaa aatgtcaacc
      121 ctaaaaatca ccaaaaaaca caataaacat ctcaacaatc cctttccttc aaacccaaaa
      181 tctataccct ttaaacaggg tactctgttt ttacattccc aaactacctt ttcatcacat
      241 caaatttttt catttggaaa tgattttgag ctaaaatgga gatcagaaaa tggtgggcat
      301 gtttcaattt ctcataactc acaacctaca agatccatat ggtcaacaat ccctggtcaa
      361 tcattcatct ctactgcaat ggctgaaaca gaagtggaag aaagcagggg atcattcatt
      421 ataaaagatc gaaatgttcg attagtatgt gatcatcaaa caattgatga aataaaagtg
      481 tttaaaagtc aaaatgatat taattttcaa gaaaaagatc aagactttgt atctggctat
      541 gatgaaattg gatcacaatt ccctgttctt gaaataaaag gtaggatttt tagcatgagg
      601 aagaacaaaa agggctcaaa tggagaaaaa tgggaacttt tggagaaaga tgtacatagt
      661 tatgtaaagt ataaattttt attagaacaa aagagtagta atcaaattag gtttcaagtg
      721 aaacttggaa aactaaatct tggttcttca ccaaaacttt caccaaggag ttacaaggga
      781 ttggttaaaa aatcgagtcg aactagaaag attcgacttc ggttattcgg gtcaatttca
      841 aaaaggaaac gggtagtcat ggatccaagt aacgaagagg aaaatgtagc aatgagagat
      901 ggtggatatg agtgttttaa caggatatgt cttacgtatt caagtgaaaa gaacgaaaga
      961 ttctttgggt ttggtgaaca gttttcgcac atggacttta aaggaagaaa agttcctatc
     1021 tttgttcaag aacaaggaat tgggagagga gatcaaccaa tcacttttgc tgctaattta
     1081 gttagctaca gggctggagg tgactggagt acaacgtatg caccgtcacc attttatttg
     1141 acttcaaaga tgaaatctct ttaccttgaa ggttacgatt attcggtctt tgatctaaca
     1201 catgatgata gagttcagat acagatacat ggagatagta ttgaaggtag gatattacat
     1261 ggaaactcac cttctgaact cattgaacaa tttaccgagt caataggcag accacctgaa
     1321 cttcctgatt ggatcatatc tggtgccgtt gttggtatgc aagggggaac agataaagtt
     1381 cgccatgttt gggaagaact tgtggctcgt gatgttccaa tatcagcatt ctggttgcag
     1441 gattgggtag gggagagaaa gacagtaatc gggtcacaac tttggtggaa ttgggaagtg
     1501 gacgaaacac gatatcaagg atggaaacaa ctaatcaacg atcttagtgc tcgacacatt
     1561 aaagtgatga catactgcaa tccttgttta gctcccgtgg aaagcaagcc agacgcaaag
     1621 cgaaacctgt ttgaagaggc gaaaaagttg gacattttag tgaaggacaa aaatggaaaa
     1681 gcatacatgg ttcctaatac tgcttttgat gttgggatgt tggatttgac tcatccgaat
     1741 actgcaaatt ggttcaagaa aattttacga gaaatggtag acgatggtgt tcggggatgg
     1801 atggctgatt tcggtgaagg gcttcctgtt gatgcttgca tatactcagg tgaggaccca
     1861 atttctgcac ataatagata gccagaaata tgggctcaaa taaaccggga gtttacagaa
     1921 gaatggaaaa gtacactaac aggaaaggaa aaagaagacc cgtcagaatt tttagttttc
     1981 tttatgagag cgggtttcag aaacagtcca aaatgggcaa tgctgttttg ggagggagat
     2041 caaatggtga gttggcaggc taacgatggc ataaaaagtg ccgttgttgg cttactaagt
     2101 agtggacttt gtggatatgc gtttaatcat agcgatattg gaggttattg tgcagtaaac
     2161 ttaccgtttt tgaagtataa aagggatgaa gagttacttt taagatggat ggagttaaat
     2221 gccttcacta caatatttcg gacacatgaa ggaaacaagc catcagtaaa tagccagttt
     2281 tactcaaacg aagcaacgtt atcacatttt gcacgttttg caaaagtgta caaagcatgg
     2341 aaattttaca ggatccaact tgtaaaggaa gctagtcaaa aaggtcttcc agtttgtcga
     2401 cacttatttc tacattaccc taacgatgat catgtacata acttgacata cgaacagttt
     2461 ctagttggtg acgagttcct agttgtcccc actctcgata aacacagaaa gagtgtgaag
     2521 gcttattttc cagttgggga aaagtgtgtt tggaaacata tatggaccgg agatttgtat
     2581 gatattcaag gttcagaagc tttgatcgat gctcctattg gttatccagc agtttttgtg
     2641 aaaaatggat ctattgttgg agagactttt ttaaaaaatt tgagagaata caagattatg
     2701 taa
//
LOCUS       XR_011757335            1277 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840292), ncRNA.
ACCESSION   XR_011757335
VERSION     XR_011757335.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1277
                     /gene="LOC139840292"
                     /note="uncharacterized LOC139840292; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840292"
     ncRNA           1..1277
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840292"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840292"
ORIGIN      
        1 agaatatcca acgaatttat gcgaatcagg cggttagaat aacaacttca actctccact
       61 aataataaac acataacaat tcgttcatca atcccagatt acatcaaaat cttcaatttc
      121 ctctacaaaa aaagatatgt gaatactacc tgcaaccaga atgctgatat tggaacatca
      181 cgagccacaa gttcttccca aacatggcga actttatctg ttcccccttg cataccaaca
      241 acggcaccag atatgatcca atcaggaagt tcaggtggtc tgcctattga ctcggtaaat
      301 tgttcaatga gttcagaagg tatgcattac ctgtatctga actctatcat catgtgttag
      361 atcaaagacc gaataatcgt aaccttcaag gtaaagagat ttcatctttg aagtcaaata
      421 aaatggtgac ggtgcatacg ttgtactcca gtcacctcca gccctataca atcacataaa
      481 aatgtttacc agccattgca gtagagatga atgattgacc agggattgtt gaccatatgg
      541 atcttgtagg ttgtgagtta tgagaaattg aaacatgccc accattttct gatctccatt
      601 ttagctcaaa atcatttcca aatgaaaaaa tttgatgtga tgaaaaggta gtttgggaat
      661 gtaaaaacag agtaccctgt ttaaagggta tagattttgg gtttgaagga aagggattgt
      721 tgagatgttt attgtgtttt ttggtgattt ttagggttga cattttttta gttttgaaat
      781 tgggtggtga atcttgaaaa gtttgatatt tagagccgtc tggctatctt ttgaacagcc
      841 aaaattaggt tcaagcattc atacttgttg atttagaggg aatatatatg ggtttggcct
      901 cacttggtga ctatatgcgg atttactaaa ttatccctat tttgggttgt gttgaagata
      961 gaaatggaaa gttgactttg gtggttatgg aagataaagg aaggatcttg attgggctat
     1021 ttaagctttg tattaatgtg gtatttattt attggttgca ctggatggag tatgggtgta
     1081 aaaacccggt taaattctga catcacttat ttacatatac atacgctatc aaatagtgag
     1141 ggatcgacaa ttttttttta cgagtacaaa atgttaaaat tttgataaaa taagtaaaca
     1201 gtaataaaac gtcgaacact gaaaaaattt tagtctttgg tgggggccga caccaattca
     1261 cctttaatag ggttatc
//
LOCUS       XM_071830555            1076 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            ORG2-like (LOC139840293), mRNA.
ACCESSION   XM_071830555
VERSION     XM_071830555.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1076
                     /gene="LOC139840293"
                     /note="transcription factor ORG2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840293"
     CDS             20..808
                     /gene="LOC139840293"
                     /codon_start=1
                     /product="transcription factor ORG2-like"
                     /protein_id="XP_071686656.1"
                     /db_xref="GeneID:139840293"
                     /translation="MLALSPPLFSTTYGWPLEVEARSYDHSLPDFHAYNHQIEHDFAP
                     ENSISSGEAVNGGTKDDMIVTKKLNHNASERDRRKRVNDLYAFLRSLLPKSNDQKKKV
                     SIPGTVTRALKYIPELQKEVEELRSKKEKLCSYSSTTIKSTKDRQLGVNQQSTKDAVI
                     KTNSSVVSSVNVLGENEDVIQLIYTICTRTNKDISFLSNVMEYMEHEEDGIVFLNATT
                     FKSFGEGMILNTVHFQMQEDKKIEAKQLKEKLCSFYQQPSRRVL"
     misc_feature    215..415
                     /gene="LOC139840293"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     Region: bHLH_SF; cl00081"
                     /db_xref="CDD:469605"
     misc_feature    order(239..244,248..250,263..265,326..331)
                     /gene="LOC139840293"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381484"
     misc_feature    order(257..262,269..274,278..283,293..295,329..334,
                     341..346,353..355,359..364,371..376)
                     /gene="LOC139840293"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:381484"
ORIGIN      
        1 tataaaaaaa attacaaaga tgctagcatt atctcctcct ttgttttcaa caacctatgg
       61 atggccatta gaagttgaag caaggtcata tgatcattca cttcctgatt ttcatgcata
      121 taatcatcaa atcgaacatg attttgcacc cgaaaattcg atttcttcag gtgaagctgt
      181 aaatggtggt actaaagatg acatgatagt gacaaaaaag ctcaatcata atgctagtga
      241 aagagatcgt cgtaagaggg ttaatgactt gtatgcgttt cttcgttcac ttctacccaa
      301 gtcaaatgat caaaagaaaa aagttagtat tccagggaca gtaactcgtg cgttgaaata
      361 catacctgaa ctacaaaagg aagtagagga gttaagaagt aaaaaggaaa agctttgttc
      421 gtattcttca acaaccatca agagcacgaa agacagacaa cttggcgtaa accaacaaag
      481 tactaaagat gctgtgatta aaacaaattc ttcggttgtt tcttcagtga acgttttagg
      541 tgaaaacgaa gatgttatcc aactgatata tacaatttgt acgaggacga ataaagatat
      601 tagcttcttg tcaaatgtta tggaatacat ggaacatgaa gaagatggga ttgtgtttct
      661 aaatgcgacg acttttaaga gttttggaga aggcatgata ttaaacactg tccattttca
      721 gatgcaagag gataagaaga tagaggctaa acagttgaaa gagaagttgt gttctttcta
      781 ccaacaaccg agtcggcgtg tactttaact ttcattggtt ataagctgta taggatcatt
      841 ttcgtatgtt atatcgtctg taaatagatg accatgacgt actgtgtaac atatccagta
      901 tttgtgtatg ctaaaatcaa tggagaacga ttgcatgagc gacacatgca ggtgttaaaa
      961 cagaggtgtc tttggacttg tctaaactct aaagtgtgca atcgaacagg gtgcagaata
     1021 tttaacgcgt ctcaaatgtt agtcaccatg tcaaaccatg ttggagagta tgacta
//
LOCUS       XR_011757336            1867 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840294), transcript variant X1, ncRNA.
ACCESSION   XR_011757336
VERSION     XR_011757336.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1867
                     /gene="LOC139840294"
                     /note="uncharacterized LOC139840294; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840294"
     ncRNA           1..1867
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840294"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840294"
ORIGIN      
        1 atttttttta tgaatttgag tttttatttg gtttttgaat taattctaca tatcttaatt
       61 ctgattcctt ttgtgttcac gcaaagattc attaaaaggg ggttaagcta gctaaatagg
      121 tgtgttcact tggcacagcc aatgtaatca ttgaagtaca gttgttgcta ttacctctaa
      181 actgatttga tcaatataga tgccttaata agggaagaag taaatttgaa gatacatcag
      241 caactgaaag gttgacgtat ttttgtgaaa gtgtgtaaaa gttaaatagc agcggactta
      301 ctgaagatac ttgtcacgct cgaacccaaa ttgaagaaat tcatgatgat agcacaaacc
      361 aagttggtca ctttcaaaag gttttttaaa tatctggaag acctgcagca gtgaattatt
      421 gagattccta caaaaaaggg tgtagagacg acaaaccttg gccaaagagc atagagaaaa
      481 gtgataaaac atatcaccta ctacatttgg accagactta cattgatttc ttaaatcgag
      541 ttcgtttcaa atcgaattcc gaagaattgt cgattccgtt ccatcgaagt tctatctaac
      601 ttaaaggtga tttgaactgt ctttgcaggg acgggttcgt ctgactggtg gaggaagact
      661 acaaagaagt ttttaaagct ctgatccatt actgatttgc aaatgggttg agtagccacc
      721 gagtatctcc tatcgagcta gatgttgact tttttatagc tgagttaaca caaatttgat
      781 aatccttagg gatgttgtgc aatcaggtat tttgccataa aaccaacatt tttttcttct
      841 tttccatgat aaggtatatg tatgtatatg tacatgtaca tgtatagtta tattgtatga
      901 gctataaatt tggtactatc tgggcaatgt gtcattctag atttgtgtaa aaagctctct
      961 catacaggta tgatatacgt gcaccttaca ctatttaaag caacgatcaa tgaattaccc
     1021 aattctgcta tttttgtctc ggtctgtcac agtctagctg ttggatgccg catctgccat
     1081 tctattaaag ttatttccca gtttacaata tctttcagtt aattttcatg ttattttcct
     1141 tttcaatttg ttcaactaat tgtatacttt ataatgtgta agcttatatt atggcactct
     1201 gacatatatc cttgacaaat tcaatcaccc ttatacaagt tgaagttgaa gagaaaggaa
     1261 ccatgaacca tagacttgag ttatttccgc agcgtctgtc gatcctattg tgggtgtttc
     1321 tgttgcgtcg gcatcattcg aaccacatac tcagttagtt ggagatggta catttatgat
     1381 gtttctcttt ttgtgttgcc attttttgga ggttgctacc gtgatatgga aaattttcag
     1441 ttgcaagttg ttctaatgtt attgatgagg aggttgtttt gccattcagt gttccttgtt
     1501 tattattcta caatttctca gcgccttcgg aagtccctgg taaaaaaatt ggttgttggt
     1561 gtattcgtct tacggtaatt gtaaaaattg tatgttaggg catttagtag ccaactgcta
     1621 tgttcaggac atcacaatgg ctgcaaaatt ttcagcctat acgtatctaa gttgtgatta
     1681 atcttaaaat tgtgtgttcg gttataccaa ttttttatgt ttgtgtaaag ctggtgaaca
     1741 taatgaagtt atcatatttt tcaaataaat ggatgtacaa gattatatat gtgacaccat
     1801 aagtaattat attatactta tgggcgtatg catacatgat acaacttgtg aaattgatga
     1861 aatgttg
//
LOCUS       XR_011757337            1847 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840294), transcript variant X2, ncRNA.
ACCESSION   XR_011757337
VERSION     XR_011757337.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1847
                     /gene="LOC139840294"
                     /note="uncharacterized LOC139840294; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840294"
     ncRNA           1..1847
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840294"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840294"
ORIGIN      
        1 atttttttta tgaatttgag tttttatttg gtttttgaat taattctaca tatcttaatt
       61 ctgattcctt ttgtgttcac gcaaagattc attaaaaggg ggttaagcta gctaaatagg
      121 tgtgttcact tggcacagcc aatgtaatca ttgaagtaca gttgttgcta ttacctctaa
      181 actgatttga tcaatataga tgccttaata agggaagaag taaatttgaa gatacatcag
      241 caactgaaag gttgacgtat ttttgtgaaa gtgtgtaaaa gttaaatagc agcggactta
      301 ctgaagatac ttgtcacgct cgaacccaaa ttgaagaaat tcatgatgat agcacaaacc
      361 aagttggtca ctttcaaaag acctgcagca gtgaattatt gagattccta caaaaaaggg
      421 tgtagagacg acaaaccttg gccaaagagc atagagaaaa gtgataaaac atatcaccta
      481 ctacatttgg accagactta cattgatttc ttaaatcgag ttcgtttcaa atcgaattcc
      541 gaagaattgt cgattccgtt ccatcgaagt tctatctaac ttaaaggtga tttgaactgt
      601 ctttgcaggg acgggttcgt ctgactggtg gaggaagact acaaagaagt ttttaaagct
      661 ctgatccatt actgatttgc aaatgggttg agtagccacc gagtatctcc tatcgagcta
      721 gatgttgact tttttatagc tgagttaaca caaatttgat aatccttagg gatgttgtgc
      781 aatcaggtat tttgccataa aaccaacatt tttttcttct tttccatgat aaggtatatg
      841 tatgtatatg tacatgtaca tgtatagtta tattgtatga gctataaatt tggtactatc
      901 tgggcaatgt gtcattctag atttgtgtaa aaagctctct catacaggta tgatatacgt
      961 gcaccttaca ctatttaaag caacgatcaa tgaattaccc aattctgcta tttttgtctc
     1021 ggtctgtcac agtctagctg ttggatgccg catctgccat tctattaaag ttatttccca
     1081 gtttacaata tctttcagtt aattttcatg ttattttcct tttcaatttg ttcaactaat
     1141 tgtatacttt ataatgtgta agcttatatt atggcactct gacatatatc cttgacaaat
     1201 tcaatcaccc ttatacaagt tgaagttgaa gagaaaggaa ccatgaacca tagacttgag
     1261 ttatttccgc agcgtctgtc gatcctattg tgggtgtttc tgttgcgtcg gcatcattcg
     1321 aaccacatac tcagttagtt ggagatggta catttatgat gtttctcttt ttgtgttgcc
     1381 attttttgga ggttgctacc gtgatatgga aaattttcag ttgcaagttg ttctaatgtt
     1441 attgatgagg aggttgtttt gccattcagt gttccttgtt tattattcta caatttctca
     1501 gcgccttcgg aagtccctgg taaaaaaatt ggttgttggt gtattcgtct tacggtaatt
     1561 gtaaaaattg tatgttaggg catttagtag ccaactgcta tgttcaggac atcacaatgg
     1621 ctgcaaaatt ttcagcctat acgtatctaa gttgtgatta atcttaaaat tgtgtgttcg
     1681 gttataccaa ttttttatgt ttgtgtaaag ctggtgaaca taatgaagtt atcatatttt
     1741 tcaaataaat ggatgtacaa gattatatat gtgacaccat aagtaattat attatactta
     1801 tgggcgtatg catacatgat acaacttgtg aaattgatga aatgttg
//
LOCUS       XR_011757338            1778 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840294), transcript variant X3, ncRNA.
ACCESSION   XR_011757338
VERSION     XR_011757338.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1778
                     /gene="LOC139840294"
                     /note="uncharacterized LOC139840294; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840294"
     ncRNA           1..1778
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840294"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840294"
ORIGIN      
        1 atttttttta tgaatttgag tttttatttg gtttttgaat taattctaca tatcttaatt
       61 ctgattcctt ttgtgttcac gcaaagattc attaaaaggg ggttaagcta gctaaatagg
      121 tgtgttcact tggcacagcc aatgtaatca ttgaagtaca gttgttgcta ttacctctaa
      181 actgatttga tcaatataga tgccttaata agggaagaag taaatttgaa gatacatcag
      241 caactgaaag gttgacgtat ttttgtgaaa gtgtgtaaaa gttaaatagc agcggactta
      301 ctgaagatac ttgtcacgct cgaacccaaa ttgaagaaat tcatgatgat agcacaaacc
      361 aagttggtca ctttcaaaag gttttttaaa tatctggaag acctgcagca gtgaattatt
      421 gagattccta caaaaaaggg tgtagagacg acaaaccttg gccaaagagc atagagaaaa
      481 gtgataaaac atatcaccta ctacatttgg accagactta cattgatttc ttaaatcgag
      541 gacgggttcg tctgactggt ggaggaagac tacaaagaag tttttaaagc tctgatccat
      601 tactgatttg caaatgggtt gagtagccac cgagtatctc ctatcgagct agatgttgac
      661 ttttttatag ctgagttaac acaaatttga taatccttag ggatgttgtg caatcaggta
      721 ttttgccata aaaccaacat ttttttcttc ttttccatga taaggtatat gtatgtatat
      781 gtacatgtac atgtatagtt atattgtatg agctataaat ttggtactat ctgggcaatg
      841 tgtcattcta gatttgtgta aaaagctctc tcatacaggt atgatatacg tgcaccttac
      901 actatttaaa gcaacgatca atgaattacc caattctgct atttttgtct cggtctgtca
      961 cagtctagct gttggatgcc gcatctgcca ttctattaaa gttatttccc agtttacaat
     1021 atctttcagt taattttcat gttattttcc ttttcaattt gttcaactaa ttgtatactt
     1081 tataatgtgt aagcttatat tatggcactc tgacatatat ccttgacaaa ttcaatcacc
     1141 cttatacaag ttgaagttga agagaaagga accatgaacc atagacttga gttatttccg
     1201 cagcgtctgt cgatcctatt gtgggtgttt ctgttgcgtc ggcatcattc gaaccacata
     1261 ctcagttagt tggagatggt acatttatga tgtttctctt tttgtgttgc cattttttgg
     1321 aggttgctac cgtgatatgg aaaattttca gttgcaagtt gttctaatgt tattgatgag
     1381 gaggttgttt tgccattcag tgttccttgt ttattattct acaatttctc agcgccttcg
     1441 gaagtccctg gtaaaaaaat tggttgttgg tgtattcgtc ttacggtaat tgtaaaaatt
     1501 gtatgttagg gcatttagta gccaactgct atgttcagga catcacaatg gctgcaaaat
     1561 tttcagccta tacgtatcta agttgtgatt aatcttaaaa ttgtgtgttc ggttatacca
     1621 attttttatg tttgtgtaaa gctggtgaac ataatgaagt tatcatattt ttcaaataaa
     1681 tggatgtaca agattatata tgtgacacca taagtaatta tattatactt atgggcgtat
     1741 gcatacatga tacaacttgt gaaattgatg aaatgttg
//
LOCUS       XM_071830556            2328 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840296), transcript variant X1, mRNA.
ACCESSION   XM_071830556
VERSION     XM_071830556.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2328
                     /gene="LOC139840296"
                     /note="uncharacterized LOC139840296; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840296"
     CDS             58..2082
                     /gene="LOC139840296"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686657.1"
                     /db_xref="GeneID:139840296"
                     /translation="MAVEEINNKNNFSMAKSDHEIDQNHEPEPVAWGTWEELLLGYAV
                     NRYGTKSWDSISTELKKRTSTTCSILFTPVHCEQKFDELKRRFNQSEDDNNNNNNNNN
                     NNNNNNNNNNNKNNHTKSNDVVLDDDDTSAIPWLDELRKQRVIELERQLKDYDLYISS
                     LQLKVKKLTEEGEKETELGHGNEGIEIRKDGETKDTSPENGSGEGSGDGESVSDRDNQ
                     SVNGSNGNVNAEIGIEKMESKPGRAAEVKGGPGEPDLSGNNGGPEKELKSEPDERTES
                     MAESKSEGGKNSDVQSSASKENSNNNRVRRGSTVIKGGDEDQSTDSIPVRSLPLVDFL
                     QKVHKIGSLVFECRLDRQEKLRYKNLIRQPIDYEILQTRLKEGWYSDGNDRFFRDLFL
                     LVNNTRIFFPKDSPESVAAANIRQLILKEMLSKKKQKTDSKLSDKQTSSKTTNLSLKR
                     SSEPANSLLMKPKLAGPIVVCRKRSSITAKAGGTSSGLDKRKEQYDLKNVDKSTEENR
                     DITPKRSRDSFPIINKKKGKSGEKSETSDTKPDKKKKLTEAEEKKQSAAKFLNRMKRS
                     SNEPLLNSLKEGGGGSEIDGKRGGNKGGSGSGGGGGGGGEVKKDQAGKKNSGGRQAKE
                     QGSPAKRSVGRPPKRAAALSPMSGNLGKRNRESGDSETLGSKQTKKRSKR"
     misc_feature    148..258
                     /gene="LOC139840296"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cd00167"
                     /db_xref="CDD:238096"
     misc_feature    <1126..1323
                     /gene="LOC139840296"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; Region:
                     Bromodomain; cl02556"
                     /db_xref="CDD:445827"
ORIGIN      
        1 atcatatatc tgcatctatt tatttatata tctatcatct atttaaaacc taagtcgatg
       61 gctgtagaag aaattaacaa caagaacaat ttctctatgg ccaaatcaga ccatgaaata
      121 gaccaaaatc acgagccgga accggtggcg tgggggacat gggaagaact gttattaggc
      181 tacgccgtta atcgttacgg aaccaaaagt tgggactcta tatctaccga gttaaaaaaa
      241 cgaacctcca ccacctgttc gattcttttc actccggttc attgtgaaca gaagttcgac
      301 gaacttaaac gtcgttttaa tcaatctgag gatgataata ataataataa taataataat
      361 aataataata ataataataa taataataat aataataaaa ataatcatac taaatctaac
      421 gacgtcgttt tagatgacga tgacacgtca gctattcctt ggctagatga attgagaaaa
      481 caacgtgtta tagaactcga acgtcaactg aaagattacg atctatacat ctcgtcgttg
      541 caattgaagg tgaagaaatt gacggaagaa ggtgaaaagg aaacggaatt agggcacgga
      601 aatgaaggaa ttgaaatccg taaagatgga gaaacgaaag atacatcgcc ggaaaacggt
      661 tccggtgaag gttccggcga cggcgagtcg gtctccgata gggataatca gtcggtgaac
      721 ggatcgaacg gaaacgtgaa cgcggaaata ggaattgaaa agatggaaag taaacccggt
      781 cgggccgcgg aagtgaaggg tgggccgggt gaaccggatt tgagtggtaa taatggtgga
      841 ccggaaaaag aactaaagag tgaaccggat gaaaggaccg agtcgatggc tgaatcgaaa
      901 agtgagggtg ggaagaattc tgatgtacaa agttcagcaa gtaaagagaa tagtaacaat
      961 aatcgggtga gacgcgggtc cactgtaatc aaaggtggag atgaggatca atcgactgat
     1021 agtattcctg ttagatcttt gcctttggtt gatttcttgc agaaggttca taaaattggc
     1081 tccctggttt ttgagtgccg gcttgatcga caggagaaat taaggtacaa aaacttaatt
     1141 aggcaaccca ttgattatga aatactacaa acaagactca aagaaggctg gtattctgat
     1201 ggtaacgaca gattctttcg agatcttttt cttctcgtta acaacactcg catatttttc
     1261 ccaaaagact ccccagaatc cgttgccgca gctaacattc gacagcttat cttaaaagaa
     1321 atgctctcca agaaaaaaca aaaaaccgat tcaaagttat ctgacaaaca aacctcatca
     1381 aaaacaacaa acttatctct aaaacgatct tctgaaccag ctaattcgtt gctcatgaag
     1441 cctaagttag ccggcccgat tgttgtttgt agaaaaagaa gctcgataac agccaaagct
     1501 ggaggaacat catctgggct tgataagaga aaagaacaat atgatttaaa gaatgttgac
     1561 aagtcaacgg aagaaaaccg ggatattaca ccaaagagat cacgagattc gtttcctata
     1621 attaacaaga aaaagggaaa gagtggtgaa aaatctgaga catcggatac caaacccgat
     1681 aagaaaaaga agctaactga agcagaagaa aagaaacaaa gtgcagctaa gtttttgaac
     1741 cgtatgaaac gttcaagcaa tgagccatta ctaaactcat tgaaagaagg cggtggtggt
     1801 tcagagattg atggtaagag aggcggcaac aagggcggta gcggcagcgg cggtggcggt
     1861 ggcggtggtg gtgaagtgaa gaaagatcag gcgggtaaaa agaattcggg tggacgacaa
     1921 gctaaagaac agggtagtcc tgcgaagaga agtgtgggcc ggccaccaaa acgggcagct
     1981 gccctgtctc ctatgtcggg gaatttgggc aaacggaaca gggagtcggg ggattcggag
     2041 acgttgggtt cgaaacagac taagaaaaga tcaaagaggt gaaatggtga gatgtagtca
     2101 tttagggttt gttagtgtcc gttatttttc agatatgatt tgaaacttgg tctaacccgt
     2161 gttggtttat tttcctaact gtttttacca atgtgacatg tggcgttttg cttgttttta
     2221 tttaagaaaa attaggtctt aaatttgtac ctttttttgg gtaactcagg aatgacttgt
     2281 caatgatgaa tgattaaaac aatactcatt ttgagtcaca actcacaa
//
LOCUS       XM_071830557            2286 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840296), transcript variant X2, mRNA.
ACCESSION   XM_071830557
VERSION     XM_071830557.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2286
                     /gene="LOC139840296"
                     /note="uncharacterized LOC139840296; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840296"
     CDS             58..2040
                     /gene="LOC139840296"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686658.1"
                     /db_xref="GeneID:139840296"
                     /translation="MAVEEINNKNNFSMAKSDHEIDQNHEPEPVAWGTWEELLLGYAV
                     NRYGTKSWDSISTELKKRTSTTCSILFTPVHCEQKFDELKRRFNQSEDDNNNNNNKNN
                     HTKSNDVVLDDDDTSAIPWLDELRKQRVIELERQLKDYDLYISSLQLKVKKLTEEGEK
                     ETELGHGNEGIEIRKDGETKDTSPENGSGEGSGDGESVSDRDNQSVNGSNGNVNAEIG
                     IEKMESKPGRAAEVKGGPGEPDLSGNNGGPEKELKSEPDERTESMAESKSEGGKNSDV
                     QSSASKENSNNNRVRRGSTVIKGGDEDQSTDSIPVRSLPLVDFLQKVHKIGSLVFECR
                     LDRQEKLRYKNLIRQPIDYEILQTRLKEGWYSDGNDRFFRDLFLLVNNTRIFFPKDSP
                     ESVAAANIRQLILKEMLSKKKQKTDSKLSDKQTSSKTTNLSLKRSSEPANSLLMKPKL
                     AGPIVVCRKRSSITAKAGGTSSGLDKRKEQYDLKNVDKSTEENRDITPKRSRDSFPII
                     NKKKGKSGEKSETSDTKPDKKKKLTEAEEKKQSAAKFLNRMKRSSNEPLLNSLKEGGG
                     GSEIDGKRGGNKGGSGSGGGGGGGGEVKKDQAGKKNSGGRQAKEQGSPAKRSVGRPPK
                     RAAALSPMSGNLGKRNRESGDSETLGSKQTKKRSKR"
     misc_feature    148..258
                     /gene="LOC139840296"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cd00167"
                     /db_xref="CDD:238096"
     misc_feature    <1084..1281
                     /gene="LOC139840296"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; Region:
                     Bromodomain; cl02556"
                     /db_xref="CDD:445827"
ORIGIN      
        1 atcatatatc tgcatctatt tatttatata tctatcatct atttaaaacc taagtcgatg
       61 gctgtagaag aaattaacaa caagaacaat ttctctatgg ccaaatcaga ccatgaaata
      121 gaccaaaatc acgagccgga accggtggcg tgggggacat gggaagaact gttattaggc
      181 tacgccgtta atcgttacgg aaccaaaagt tgggactcta tatctaccga gttaaaaaaa
      241 cgaacctcca ccacctgttc gattcttttc actccggttc attgtgaaca gaagttcgac
      301 gaacttaaac gtcgttttaa tcaatctgag gatgataata ataataataa taataaaaat
      361 aatcatacta aatctaacga cgtcgtttta gatgacgatg acacgtcagc tattccttgg
      421 ctagatgaat tgagaaaaca acgtgttata gaactcgaac gtcaactgaa agattacgat
      481 ctatacatct cgtcgttgca attgaaggtg aagaaattga cggaagaagg tgaaaaggaa
      541 acggaattag ggcacggaaa tgaaggaatt gaaatccgta aagatggaga aacgaaagat
      601 acatcgccgg aaaacggttc cggtgaaggt tccggcgacg gcgagtcggt ctccgatagg
      661 gataatcagt cggtgaacgg atcgaacgga aacgtgaacg cggaaatagg aattgaaaag
      721 atggaaagta aacccggtcg ggccgcggaa gtgaagggtg ggccgggtga accggatttg
      781 agtggtaata atggtggacc ggaaaaagaa ctaaagagtg aaccggatga aaggaccgag
      841 tcgatggctg aatcgaaaag tgagggtggg aagaattctg atgtacaaag ttcagcaagt
      901 aaagagaata gtaacaataa tcgggtgaga cgcgggtcca ctgtaatcaa aggtggagat
      961 gaggatcaat cgactgatag tattcctgtt agatctttgc ctttggttga tttcttgcag
     1021 aaggttcata aaattggctc cctggttttt gagtgccggc ttgatcgaca ggagaaatta
     1081 aggtacaaaa acttaattag gcaacccatt gattatgaaa tactacaaac aagactcaaa
     1141 gaaggctggt attctgatgg taacgacaga ttctttcgag atctttttct tctcgttaac
     1201 aacactcgca tatttttccc aaaagactcc ccagaatccg ttgccgcagc taacattcga
     1261 cagcttatct taaaagaaat gctctccaag aaaaaacaaa aaaccgattc aaagttatct
     1321 gacaaacaaa cctcatcaaa aacaacaaac ttatctctaa aacgatcttc tgaaccagct
     1381 aattcgttgc tcatgaagcc taagttagcc ggcccgattg ttgtttgtag aaaaagaagc
     1441 tcgataacag ccaaagctgg aggaacatca tctgggcttg ataagagaaa agaacaatat
     1501 gatttaaaga atgttgacaa gtcaacggaa gaaaaccggg atattacacc aaagagatca
     1561 cgagattcgt ttcctataat taacaagaaa aagggaaaga gtggtgaaaa atctgagaca
     1621 tcggatacca aacccgataa gaaaaagaag ctaactgaag cagaagaaaa gaaacaaagt
     1681 gcagctaagt ttttgaaccg tatgaaacgt tcaagcaatg agccattact aaactcattg
     1741 aaagaaggcg gtggtggttc agagattgat ggtaagagag gcggcaacaa gggcggtagc
     1801 ggcagcggcg gtggcggtgg cggtggtggt gaagtgaaga aagatcaggc gggtaaaaag
     1861 aattcgggtg gacgacaagc taaagaacag ggtagtcctg cgaagagaag tgtgggccgg
     1921 ccaccaaaac gggcagctgc cctgtctcct atgtcgggga atttgggcaa acggaacagg
     1981 gagtcggggg attcggagac gttgggttcg aaacagacta agaaaagatc aaagaggtga
     2041 aatggtgaga tgtagtcatt tagggtttgt tagtgtccgt tatttttcag atatgatttg
     2101 aaacttggtc taacccgtgt tggtttattt tcctaactgt ttttaccaat gtgacatgtg
     2161 gcgttttgct tgtttttatt taagaaaaat taggtcttaa atttgtacct ttttttgggt
     2221 aactcaggaa tgacttgtca atgatgaatg attaaaacaa tactcatttt gagtcacaac
     2281 tcacaa
//
LOCUS       XM_071830558            2280 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840296), transcript variant X3, mRNA.
ACCESSION   XM_071830558
VERSION     XM_071830558.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2280
                     /gene="LOC139840296"
                     /note="uncharacterized LOC139840296; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840296"
     CDS             58..2034
                     /gene="LOC139840296"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_071686659.1"
                     /db_xref="GeneID:139840296"
                     /translation="MAVEEINNKNNFSMAKSDHEIDQNHEPEPVAWGTWEELLLGYAV
                     NRYGTKSWDSISTELKKRTSTTCSILFTPVHCEQKFDELKRRFNQSEDDNNNNKNNHT
                     KSNDVVLDDDDTSAIPWLDELRKQRVIELERQLKDYDLYISSLQLKVKKLTEEGEKET
                     ELGHGNEGIEIRKDGETKDTSPENGSGEGSGDGESVSDRDNQSVNGSNGNVNAEIGIE
                     KMESKPGRAAEVKGGPGEPDLSGNNGGPEKELKSEPDERTESMAESKSEGGKNSDVQS
                     SASKENSNNNRVRRGSTVIKGGDEDQSTDSIPVRSLPLVDFLQKVHKIGSLVFECRLD
                     RQEKLRYKNLIRQPIDYEILQTRLKEGWYSDGNDRFFRDLFLLVNNTRIFFPKDSPES
                     VAAANIRQLILKEMLSKKKQKTDSKLSDKQTSSKTTNLSLKRSSEPANSLLMKPKLAG
                     PIVVCRKRSSITAKAGGTSSGLDKRKEQYDLKNVDKSTEENRDITPKRSRDSFPIINK
                     KKGKSGEKSETSDTKPDKKKKLTEAEEKKQSAAKFLNRMKRSSNEPLLNSLKEGGGGS
                     EIDGKRGGNKGGSGSGGGGGGGGEVKKDQAGKKNSGGRQAKEQGSPAKRSVGRPPKRA
                     AALSPMSGNLGKRNRESGDSETLGSKQTKKRSKR"
     misc_feature    148..258
                     /gene="LOC139840296"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cd00167"
                     /db_xref="CDD:238096"
     misc_feature    <1078..1275
                     /gene="LOC139840296"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; Region:
                     Bromodomain; cl02556"
                     /db_xref="CDD:445827"
ORIGIN      
        1 atcatatatc tgcatctatt tatttatata tctatcatct atttaaaacc taagtcgatg
       61 gctgtagaag aaattaacaa caagaacaat ttctctatgg ccaaatcaga ccatgaaata
      121 gaccaaaatc acgagccgga accggtggcg tgggggacat gggaagaact gttattaggc
      181 tacgccgtta atcgttacgg aaccaaaagt tgggactcta tatctaccga gttaaaaaaa
      241 cgaacctcca ccacctgttc gattcttttc actccggttc attgtgaaca gaagttcgac
      301 gaacttaaac gtcgttttaa tcaatctgag gatgataata ataataataa aaataatcat
      361 actaaatcta acgacgtcgt tttagatgac gatgacacgt cagctattcc ttggctagat
      421 gaattgagaa aacaacgtgt tatagaactc gaacgtcaac tgaaagatta cgatctatac
      481 atctcgtcgt tgcaattgaa ggtgaagaaa ttgacggaag aaggtgaaaa ggaaacggaa
      541 ttagggcacg gaaatgaagg aattgaaatc cgtaaagatg gagaaacgaa agatacatcg
      601 ccggaaaacg gttccggtga aggttccggc gacggcgagt cggtctccga tagggataat
      661 cagtcggtga acggatcgaa cggaaacgtg aacgcggaaa taggaattga aaagatggaa
      721 agtaaacccg gtcgggccgc ggaagtgaag ggtgggccgg gtgaaccgga tttgagtggt
      781 aataatggtg gaccggaaaa agaactaaag agtgaaccgg atgaaaggac cgagtcgatg
      841 gctgaatcga aaagtgaggg tgggaagaat tctgatgtac aaagttcagc aagtaaagag
      901 aatagtaaca ataatcgggt gagacgcggg tccactgtaa tcaaaggtgg agatgaggat
      961 caatcgactg atagtattcc tgttagatct ttgcctttgg ttgatttctt gcagaaggtt
     1021 cataaaattg gctccctggt ttttgagtgc cggcttgatc gacaggagaa attaaggtac
     1081 aaaaacttaa ttaggcaacc cattgattat gaaatactac aaacaagact caaagaaggc
     1141 tggtattctg atggtaacga cagattcttt cgagatcttt ttcttctcgt taacaacact
     1201 cgcatatttt tcccaaaaga ctccccagaa tccgttgccg cagctaacat tcgacagctt
     1261 atcttaaaag aaatgctctc caagaaaaaa caaaaaaccg attcaaagtt atctgacaaa
     1321 caaacctcat caaaaacaac aaacttatct ctaaaacgat cttctgaacc agctaattcg
     1381 ttgctcatga agcctaagtt agccggcccg attgttgttt gtagaaaaag aagctcgata
     1441 acagccaaag ctggaggaac atcatctggg cttgataaga gaaaagaaca atatgattta
     1501 aagaatgttg acaagtcaac ggaagaaaac cgggatatta caccaaagag atcacgagat
     1561 tcgtttccta taattaacaa gaaaaaggga aagagtggtg aaaaatctga gacatcggat
     1621 accaaacccg ataagaaaaa gaagctaact gaagcagaag aaaagaaaca aagtgcagct
     1681 aagtttttga accgtatgaa acgttcaagc aatgagccat tactaaactc attgaaagaa
     1741 ggcggtggtg gttcagagat tgatggtaag agaggcggca acaagggcgg tagcggcagc
     1801 ggcggtggcg gtggcggtgg tggtgaagtg aagaaagatc aggcgggtaa aaagaattcg
     1861 ggtggacgac aagctaaaga acagggtagt cctgcgaaga gaagtgtggg ccggccacca
     1921 aaacgggcag ctgccctgtc tcctatgtcg gggaatttgg gcaaacggaa cagggagtcg
     1981 ggggattcgg agacgttggg ttcgaaacag actaagaaaa gatcaaagag gtgaaatggt
     2041 gagatgtagt catttagggt ttgttagtgt ccgttatttt tcagatatga tttgaaactt
     2101 ggtctaaccc gtgttggttt attttcctaa ctgtttttac caatgtgaca tgtggcgttt
     2161 tgcttgtttt tatttaagaa aaattaggtc ttaaatttgt accttttttt gggtaactca
     2221 ggaatgactt gtcaatgatg aatgattaaa acaatactca ttttgagtca caactcacaa
//
LOCUS       XM_071830560            1261 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger CCCH
            domain-containing protein 14-like (LOC139840297), mRNA.
ACCESSION   XM_071830560
VERSION     XM_071830560.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1261
                     /gene="LOC139840297"
                     /note="zinc finger CCCH domain-containing protein 14-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139840297"
     CDS             155..1000
                     /gene="LOC139840297"
                     /codon_start=1
                     /product="zinc finger CCCH domain-containing protein
                     14-like"
                     /protein_id="XP_071686661.1"
                     /db_xref="GeneID:139840297"
                     /translation="MKRAWPNSKPNGAYKKSKSESENLPSGIRGKTKPCMKYFSIEGC
                     PFGEKCHFLHYFPGGYNAVAQMMNLPLISTAQATTQNGPQAVLKSKMCNKYNTPEGCK
                     FGDQCSFAHGDRELGKPIAPSHDDPRTLPPVSGRPTPSVVTTFGASATAKISVDASLT
                     GAIIGKGGVNSKQVCRQTGVKLAIRDHESDTNIKNIELEGTFDQIKEASTLVRELILN
                     VSAGASSRHGSAGPPRTSGGAPSNPTRSNMKTKMCENFTKGSCTFGERCHFAHGDAEL
                     RKPGV"
     misc_feature    245..316
                     /gene="LOC139840297"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     Region: zf-CCCH; pfam00642"
                     /db_xref="CDD:459885"
     misc_feature    <386..991
                     /gene="LOC139840297"
                     /note="CCCH-type Zn-finger protein [General function
                     prediction only]; Region: CTH1; COG5063"
                     /db_xref="CDD:227395"
     misc_feature    605..802
                     /gene="LOC139840297"
                     /note="type I K homology (KH) RNA-binding domain found in
                     Arabidopsis thaliana zinc finger CCCH domain-containing
                     proteins AtC3H36, AtC3H52 and similar proteins; Region:
                     KH-I_AtC3H36_like; cd22464"
                     /db_xref="CDD:411892"
     misc_feature    order(626..628,632..640,644..658,665..670,677..682,
                     695..706)
                     /gene="LOC139840297"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:411892"
     misc_feature    899..973
                     /gene="LOC139840297"
                     /note="zinc finger; Region: ZnF_C3H1; smart00356"
                     /db_xref="CDD:214632"
ORIGIN      
        1 cctcttcgtt catgttctac ccctttcaat tccaatactc aacgccaaaa ccctaaccct
       61 agccctaatt taggtttttt tttctttcgg aaattgagtt ctgactgtaa tctgcaataa
      121 ctaatcaaat ttattataat cttcaacatc agctatgaag agagcatggc ctaattctaa
      181 acccaatggc gcttacaaaa aatccaaatc agaatcggag aatttaccaa gtggtataag
      241 aggcaaaacc aagccttgca tgaagtattt cagcattgaa ggctgtccat ttggagaaaa
      301 atgtcacttc ctccattact tccccggtgg ctataatgcc gttgcccaaa tgatgaatct
      361 tccgctaatt tcaaccgctc aagccaccac acaaaacggg ccccaggcag ttttaaaatc
      421 caagatgtgc aacaaataca acacccctga aggctgtaag tttggtgacc aatgtagctt
      481 tgctcatgga gaccgggaac tcggtaaacc tatcgctcca tcgcacgatg acccgcggac
      541 cctaccaccc gtctcgggcc gccccacacc aagtgtagtt accacctttg gtgcctcagc
      601 caccgccaaa atcagcgttg acgcttctct caccggtgcc attatcggta aaggcggtgt
      661 aaattccaaa caagtttgta gacaaacagg agtcaaactt gcaattcggg atcacgagag
      721 tgacacaaat attaaaaaca tcgaacttga agggacattt gatcaaatta aggaagcaag
      781 taccttggtt agagagctaa tattaaatgt gagtgcgggt gcaagttcaa gacatggttc
      841 agcgggtcca cctagaactt ctggtggggc cccttcgaac cctaccagaa gcaacatgaa
      901 gacaaagatg tgtgaaaatt tcaccaaggg atcttgcacc tttggtgaaa ggtgccattt
      961 tgcgcatggt gatgctgagt tgcgaaaacc aggtgtgtaa gatttagatg ttttatttag
     1021 gcataaagtt ttggtaagtg actgcctttt tttctgtagt aaagattttt gtttatgtgg
     1081 acctgtgtca acaattaatg gtatcatggg tatgggacac ctgaacatag tggtgctgcg
     1141 ataacgttta gtaattcgtg ggttcgggtg cttgatctaa gttatgaaac ttttagattg
     1201 taatatcaaa gttgtttgcc taaaggatgc tatgcagcta tcaccaaccg atattagtat
     1261 g
//
LOCUS       XM_071830561            1547 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840298), mRNA.
ACCESSION   XM_071830561
VERSION     XM_071830561.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1547
                     /gene="LOC139840298"
                     /note="uncharacterized LOC139840298; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840298"
     CDS             7..1260
                     /gene="LOC139840298"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686662.1"
                     /db_xref="GeneID:139840298"
                     /translation="MCLSMASSYSSTCPITHPLLSHNNNNRIIFSHVSTCNFFNKNKA
                     ASNSIRAMAAQPQRSPMQYNQLGDSNLVVSEITFGTMTFGEQNTEKEAHEMLSYACEN
                     GINTLDTAEMYPVPVKKETQGLTDIYIGNWLKSRPRDQIILATKVSGYSERSTYLRDN
                     AEVVRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEFFYDPLKWRQSVPF
                     VEQLRAFQELIEEGKVRYIGVSNETSYGVMEFVNAAKAEGLPKIVSIQNSYSLLARCK
                     FEVDLVEVCHPKNCNVGLLSYSPLAGGALSGKYLDPESEAAKKGRLQLFPGYMERYNK
                     SISKEATVEYIEMAKKHGLTPVELALGFVRDRPFMTSTIIGATSLEQLKEDLDAFLMT
                     ERPLPPDVMADIETIFKRYKDPSIL"
     misc_feature    223..1227
                     /gene="LOC139840298"
                     /note="Escherichia coli Tas protein and similar proteins;
                     Region: AKR_Tas-like; cd19094"
                     /db_xref="CDD:381320"
     misc_feature    order(241..249,262..264,328..330,343..345,442..444,
                     583..585,724..729,802..804,895..915,922..924,928..930,
                     961..969,1072..1074,1123..1137,1147..1149,1159..1161)
                     /gene="LOC139840298"
                     /note="active site"
                     /db_xref="CDD:381320"
     misc_feature    order(328..330,343..345,442..444,583..585)
                     /gene="LOC139840298"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381320"
ORIGIN      
        1 aaacagatgt gtttatcaat ggcttcttct tattcatcta cgtgtcccat aactcacccc
       61 cttctctccc acaacaacaa taatcgaatt attttcagtc atgtttcaac ctgcaatttc
      121 ttcaataaaa ataaagcggc atccaatagc attagggcca tggcagcaca acctcaaaga
      181 agcccaatgc aatataatca gcttggggat tcaaacctcg ttgttagtga aatcactttt
      241 ggcactatga cttttgggga acagaacaca gagaaggagg ctcatgaaat gctttcgtat
      301 gcatgcgaga atggcattaa tactttagac actgcagaaa tgtatccggt tccagtgaag
      361 aaggagacac aaggattaac agatatttat attggaaact ggctgaaatc tcggcctcgt
      421 gaccagatta tattggctac taaagtgagt ggttactcag agagatccac ttatctacga
      481 gataatgcgg aagttgtcag ggttgatgct gccaacatca aagaaagtgt ggagaaaagc
      541 ttaaaacgtc ttaacacgga ttacatcgat ttattacaaa ttcattggcc agatcgctat
      601 gtggctttgt ttggtgaatt cttttacgat cctttgaaat ggaggcaaag cgtgccattt
      661 gttgaacagc tcagggcctt tcaagaactt attgaagaag gaaaagtacg ctacattggc
      721 gtttcaaatg aaacttcata tggagtcatg gaattcgtta atgctgcaaa agctgaagga
      781 cttcctaaaa tcgtcagcat tcaaaacagt tacagcctgc tagcaagatg caagtttgaa
      841 gttgatcttg ttgaagtatg ccatccaaaa aactgtaatg tcgggttact ttcgtattct
      901 ccattggctg gtggagcatt aagtggaaag tatctggatc cagagtctga agctgctaaa
      961 aagggcagac ttcaactatt tcccggatac atggaaagat acaataagtc catatcaaag
     1021 gaagcaacgg tagagtacat tgaaatggca aagaaacatg gactcacccc ggttgaacta
     1081 gcactaggat ttgttagaga ccgcccattt atgacgagca caattatcgg tgcaacatct
     1141 ttagaacaac taaaagagga tcttgatgct ttcttgatga cagagagacc cttaccaccc
     1201 gatgtgatgg cggatatcga aactattttc aaaagataca aagatccttc aatcctttag
     1261 ataaaaaggc agaaggtttt ccctgtttgg gttactcggg agggtgagta atccgactcc
     1321 atactctgat gtacgcagcc tatcaggatt attctctggc tgtttccaac ccttccctga
     1381 ccaccagtaa atattcgtcc caatccttca atcctttaga tattcaagta ttctttgata
     1441 catttttgat aaaatgttag agactttgtt gtagtatatg ttcatctatt catcaccata
     1501 taatatatat atactttcac aaatgaataa gtcatgttat aagatgt
//
LOCUS       XM_071830562            1156 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides anamorsin homolog
            (LOC139840299), mRNA.
ACCESSION   XM_071830562
VERSION     XM_071830562.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1156
                     /gene="LOC139840299"
                     /note="anamorsin homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840299"
     CDS             151..972
                     /gene="LOC139840299"
                     /codon_start=1
                     /product="anamorsin homolog"
                     /protein_id="XP_071686663.1"
                     /db_xref="GeneID:139840299"
                     /translation="MGTHGVEGTVLALIENVVMPLHEVLNAVRMIKNEAVEKINPLII
                     TQASSLSSLPVDPSSVDFIITMGRSEEFPSDKLFQEFSRVLKPGGDIFVHQTLNASKA
                     NTTSSLERKLLVAGFSDIEVVRMAEVLSEGLQSFGVKGKKPSWKIGSSFSLKKPVKSL
                     PKVELIDDMDLIDEDSLLSEEDLKKPKLPPVGDCEVGSTRKACKNCVCGRAEQEDKVE
                     KLGVTLDQLENPQSSCGSCGLGDAFRCNTCPYKGLPPFKLGQKVTLSDNFLAADI"
     misc_feature    280..969
                     /gene="LOC139840299"
                     /note="Uncharacterized conserved protein, contains
                     Zn-ribbon-like motif [Function unknown]; Region: COG5636"
                     /db_xref="CDD:227923"
     misc_feature    727..942
                     /gene="LOC139840299"
                     /note="Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
                     biogenesis; Region: CIAPIN1; pfam05093"
                     /db_xref="CDD:398662"
     polyA_site      1156
                     /gene="LOC139840299"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcgtacaaat tcagaaagtg gttatctttt tcctcacaaa aacctccatt cttcatcaat
       61 caccgccgct attaattttc attttccgat cagttattct tttttctccg tactgctcag
      121 cttaacagaa gctattttag ttgtgatcta atgggcacac atggggtgga aggtactgta
      181 ttagcactca tagagaatgt tgtgatgcct cttcatgaag tgctaaatgc tgtaagaatg
      241 atcaagaatg aagcagttga aaagattaat ccccttatta tcactcaagc ttcatcacta
      301 agttctttgc cagtggaccc atcatctgtg gattttatca taaccatggg tagatcagaa
      361 gagtttccga gtgacaagtt gtttcaggaa ttttctcggg tgttgaagcc tggtggagat
      421 atatttgttc accaaacttt aaatgcttct aaagcaaata ccacgtcctc ccttgagcgc
      481 aagttattag ttgcaggatt ttcggatatt gaggttgttc ggatggcaga ggtgctatct
      541 gaaggtctac agtcctttgg ggtaaaggga aagaagcctt cttggaagat aggttcatct
      601 ttttctctta agaagccggt gaaaagctta ccaaaagtag agcttattga tgatatggat
      661 cttattgatg aggatagtct cttatctgaa gaagatttaa agaagcccaa gctcccacct
      721 gttggagatt gtgaagttgg aagcactagg aaagcatgca agaactgcgt ttgtggacgc
      781 gctgaacaag aggataaagt agaaaagttg ggagtcaccc ttgaccagct tgaaaatcca
      841 cagtcatcat gtggcagttg cggtttaggt gatgcgttca ggtgcaatac atgcccttac
      901 aagggtcttc ctcctttcaa attaggccag aaggtgacat tatctgataa ttttcttgct
      961 gcggacattt aagagccata agggaagcat acttgagaga tcacatgtgg gtttggcaaa
     1021 ttttccggca atggtaagaa acatctagtt atactttgta agtttgtatt ttttgaaaga
     1081 cagttgagtc gtacgcaagt tcttttccct tgtagacttg attcactgta ttttaagaag
     1141 attgaacttt tcataa
//
LOCUS       XM_071830563             881 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thylakoid lumenal 17.4 kDa
            protein, chloroplastic (LOC139840300), mRNA.
ACCESSION   XM_071830563
VERSION     XM_071830563.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..881
                     /gene="LOC139840300"
                     /note="thylakoid lumenal 17.4 kDa protein, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139840300"
     CDS             47..763
                     /gene="LOC139840300"
                     /codon_start=1
                     /product="thylakoid lumenal 17.4 kDa protein,
                     chloroplastic"
                     /protein_id="XP_071686664.1"
                     /db_xref="GeneID:139840300"
                     /translation="MASPLFPHTFSSSSPAVSSAVKLTRLPILSSIRVTCSANTNNSV
                     STSKEDSCKFKELRNVACGILTVWALTTTTPVIAANQRLPPLSTDPERCQRAFVGNTI
                     GQANGVYDKAIDLRFCDYTNEKTNLKGKSLAAALMSEAIFDGADMSEVVMSKAYAVGA
                     SFKGTDFTNAVLDRVNFGKANLTGASFKNTVLSGSTFEDAQLQDVVFEDTIIGYIDLQ
                     KLCVNKTINEDSRLELGCRN"
     misc_feature    326..721
                     /gene="LOC139840300"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; Region: YjbI;
                     COG1357"
                     /db_xref="CDD:440968"
     polyA_site      881
                     /gene="LOC139840300"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtatggataa taatagccaa actaaacaaa tcaatcaatc tttctaatgg cgtcccctct
       61 ttttcctcat acattttctt cttcttctcc ggcagtctct tccgccgtta aacttacccg
      121 gcttcctatt ttgtcatcaa tccgcgtcac ctgttccgct aatacaaata attctgtttc
      181 aacatctaaa gaagattcat gcaagttcaa ggagctaagg aatgtagctt gtggtattct
      241 tactgtttgg gctctcacaa ccactacacc agtaattgct gctaatcaga ggctacctcc
      301 gttatctaca gaccctgaga ggtgtcagcg tgcatttgtt ggaaacacga taggtcaagc
      361 taatggcgta tacgacaagg caattgatct ccgtttttgt gactacacaa acgaaaagac
      421 gaatctcaag gggaagtctc ttgcagccgc acttatgtct gaagccatat ttgatggtgc
      481 tgatatgtct gaagttgtaa tgtctaaggc ttatgctgtt ggagctagct ttaaaggtac
      541 agattttact aatgcagttc ttgatcgagt caactttggg aaggcaaacc ttacgggagc
      601 ttcgtttaaa aacactgtac tatctggttc gacattcgaa gatgcgcaac tgcaggatgt
      661 agtgttcgaa gacacgatca ttggatacat cgaccttcaa aaattgtgtg taaataaaac
      721 aattaatgaa gattcaagac tcgaactggg atgtcgaaat tagaattgtg gtttctttca
      781 cttgtgtaca attaacacgg aatcaatttt tgttgtatat tttcgagata tacatatgaa
      841 actcttttgt tcataatgga gaacatatta tttttttgat t
//
LOCUS       XM_071830564            2487 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NEDD1-like
            (LOC139840301), mRNA.
ACCESSION   XM_071830564
VERSION     XM_071830564.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2487
                     /gene="LOC139840301"
                     /note="protein NEDD1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840301"
     CDS             38..2326
                     /gene="LOC139840301"
                     /codon_start=1
                     /product="protein NEDD1-like"
                     /protein_id="XP_071686665.1"
                     /db_xref="GeneID:139840301"
                     /translation="MNFTDPEMSLLAASGGDTVKLFDLSMDHGDPCVLTHTPSPGSHV
                     NSVKWNHTNLVVASAGDDKKISFWRKNGQSMGTIPTAGTDSGDNIEESIFTINFSTKQ
                     SRYLCSGGSGQVVRIWDLQRRRCIKWLKGHTDTITDVKYNCRDDNLASISLCGDLLIH
                     NLSSGARPTELKDPNGQVLRVLDYSRISRHLLVTAGDDGSVHLWDTSSTSRNPNPKIS
                     WLKQHSAPTAGISFSPSSDKMIASVGLDKKLYTFDSGSKRPSFCIPYEAPFSSVAYRD
                     DGNTLAAGTTTGQVVFYDVRAKPQPFTVLRAYSNSEAVTSLCWQRSKPDHINEKNCTP
                     DTALIGNNVDDSIVMPDPLPPPTISASSIPGSRNSIRAGPSPESATSAVVSGYDSSAG
                     EETPLRSSLWAGGLSRLNAPRGYNFNYKDDMDVFSPLQEVQPITPSFDKLFEGTRNEF
                     EKKTSLLFPSSKRFPLAMDVGSDPQSIFDWKPPSTMDDTRTPISQPISSPVKANEPSS
                     ITPPEAWGGERASDKFARPRQQGTLPSRFATLASSSSISSGSMMTGLQDLSLPSNQTG
                     INYRVRDSSFSQESPLAFSDVTFGSTSVTLGVKGNMESSTQTRRFSSYAERISTNPSF
                     SDGTVCAVGSPKVKKTGAETKEEPLSSFSPKQEISVVKESEIPTSMNGMNTQQQKTPL
                     QGSSSFSLQLFQGTLDEALGSFQKSIHEDVRNLHIEVLRQFHMQEMQMSNAMSSILET
                     QAELMKEIKLLRKENQELRQLL"
     misc_feature    <65..994
                     /gene="LOC139840301"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    170..289
                     /gene="LOC139840301"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    314..427
                     /gene="LOC139840301"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    446..553
                     /gene="LOC139840301"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    572..700
                     /gene="LOC139840301"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    722..826
                     /gene="LOC139840301"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    842..916
                     /gene="LOC139840301"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    <2243..2323
                     /gene="LOC139840301"
                     /note="Sperm tail C-terminal domain; Region:
                     NYD-SP28_assoc; pfam14775"
                     /db_xref="CDD:464309"
ORIGIN      
        1 tagctccggc atcacatcaa aaccctaaat tcagtaaatg aattttaccg atccagaaat
       61 gtcgctattg gccgctagcg gtggcgacac tgtgaaattg tttgacttgt ccatggatca
      121 cggcgatcct tgtgttctta ctcacactcc ttcacctggt tctcatgtta attctgttaa
      181 gtggaatcat acaaatttgg tggtggcaag tgctggtgat gataaaaaga tatcattttg
      241 gcgaaaaaat ggtcaaagta tgggtaccat tcctactgcc ggcactgaca gtggtgataa
      301 tattgaggaa tctatattta ctatcaactt tagtacaaaa caatctcgtt acttatgttc
      361 tggtggaagt ggtcaagtag tgagaatatg ggatttgcag aggaggaggt gtataaagtg
      421 gttaaagggt catacagaca caataacaga tgtaaaatac aattgcagag atgataattt
      481 agcttccatt agtctttgcg gcgatcttct tattcacaac ctttcgtctg gagcaaggcc
      541 tactgaactc aaggatccaa atggacaggt cttgagggtg cttgattatt cacggattag
      601 caggcacctt ttagtgactg ctggtgatga tggctctgtt catttgtggg atacaagttc
      661 aactagtcgg aacccaaatc caaagatttc ttggttaaag cagcattctg caccaacagc
      721 tggcatcagt ttttcaccgt ccagtgacaa gatgattgct agtgtgggac tagataaaaa
      781 gttatacact tttgactccg ggtcaaaaag accctcgttt tgcattccat atgaagcacc
      841 tttttcttca gttgcataca gagacgatgg aaacacgctg gctgctggaa caactactgg
      901 tcaggttgta ttctatgatg ttcgtgcaaa accacaaccg tttaccgttc ttcgtgctta
      961 ttcaaattct gaggccgtca caagtttatg ctggcaaaga tcaaagcccg atcatataaa
     1021 tgaaaaaaat tgcacaccag atacagctct cattggaaat aatgtggatg attcaattgt
     1081 tatgccggac ccactgcctc ccccaaccat atctgcttct tcaattcccg ggtcccggaa
     1141 ttctattcgt gcgggaccct ctccggagtc tgccacatca gcagttgtta gtggttatga
     1201 ttcatctgca ggggaagaaa caccattaag aagctcatta tgggcaggtg gattgtctag
     1261 attaaatgcc ccacgaggtt ataattttaa ttacaaggat gatatggacg tgttctcacc
     1321 attgcaagaa gtacaaccga tcacaccgtc ttttgataag ttatttgaag gaactagaaa
     1381 tgaatttgag aaaaaaactt ctcttttgtt tccttcatcg aaaagattcc ctcttgcaat
     1441 ggatgtgggc agtgatcctc agtcaatatt tgactggaaa cctccctcaa ctatggatga
     1501 cacccgaacg cccatctctc agccaatttc ttctcctgta aaagccaatg aaccgtcatc
     1561 gattacacct ccggaagcat ggggtggcga aagagcatcc gataaattcg cccgtccacg
     1621 tcagcaaggg acacttcctt ctcggtttgc aacattggca tcttcttcca gtatatcttc
     1681 aggatccatg atgactggac tacaagattt aagtttacct tcaaatcaga cgggtattaa
     1741 ttaccgagtc agggacagct cttttagcca agagagccct ttagcgtttt ctgatgtcac
     1801 atttggttct acatctgtta cacttggtgt gaaagggaat atggaatctt ctacccaaac
     1861 tagaaggttt tcaagttatg ctgagagaat aagcactaac ccatccttta gtgacggtac
     1921 agtatgtgct gtggggtccc cgaaagtaaa gaaaacaggg gctgaaacaa aagaagagcc
     1981 tttgagtagc ttttcaccaa agcaggagat ttcggttgtc aaagaatctg aaattcctac
     2041 atccatgaat ggtatgaata cacaacagca gaaaacacct ttgcagggat cttcttcatt
     2101 ctcacttcaa ctgtttcaag ggacacttga tgaagctctt ggttcttttc agaaatccat
     2161 tcatgaagat gttagaaatc ttcatattga agttttaagg caatttcata tgcaggagat
     2221 gcaaatgtct aatgcaatga gctcgatttt ggaaactcag gcagagctta tgaaggaaat
     2281 caaattgtta cgcaaggaga atcaggaact tcggcagctt ttatgatggg tgttaactat
     2341 ataatgtgct tcttcatttt aaatcgagtc tactttcaaa tgattgtatt tgggttttcg
     2401 ttgcaagctg accatcgtat ttgtggcttt caaaaagtaa gcggatttgg aaaattatgg
     2461 gtttttttgt tgcattttac aacaatg
//
LOCUS       XM_071830565            1712 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polygalacturonase-like
            (LOC139840302), transcript variant X1, mRNA.
ACCESSION   XM_071830565
VERSION     XM_071830565.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1712
                     /gene="LOC139840302"
                     /note="polygalacturonase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840302"
     CDS             426..1622
                     /gene="LOC139840302"
                     /codon_start=1
                     /product="exopolygalacturonase-like isoform X1"
                     /protein_id="XP_071686666.1"
                     /db_xref="GeneID:139840302"
                     /translation="MGIIIKLIQSALCCLFLLSLAVKNHAAVIDVKTKGAKGDGVTDD
                     GPVIMNAWNEACGGAPPNTLLFPPGTYMAFPHIKLTGPCKGPIEIKATGATIKAPSDL
                     TLFKKDTWIYISFVDGLTMTGGTFDGQGQQSWRTKNCNNDKAACTKPVNLRLRHVSHS
                     LIKDVTSIHSKRFHIAMMGCDNTTLDHITINAPGDSVNTDGVHTSKLNGLKILNSDIK
                     TGDDCISFGEGSKNIHVEKVTCGPGHGFSIGSLGNSPNEEPVQGIWVKNCTLARTDNG
                     VRIKTWPGGYPGTVSDVHFEDIVVDKVANPIIIDQNYCPFRSCVQTSGPSKVKISDVS
                     FRNIKGTSTTQISLKLNCSAEAPCINVELDNVNLVHTRGPPAKSRCFNIKPKIVGQVV
                     PPACSA"
     misc_feature    492..1613
                     /gene="LOC139840302"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 tttatgaatt tctaaggagt tgttacactg cacattttta ctttaagaag ataaatctaa
       61 cttacaaaca ttacttttaa ataaaatgga taaaaaaatt tctattcagt ttactaagtc
      121 tttttactaa aatgtacatg gtctaactgg gttatccgtg accgattttg acccatttcc
      181 tggtcacccc aagagatgtt gctactgatg tttgaaataa tatataagga ctccatctac
      241 taaactatct cgagatggtt tacaaacatt actttgaatt aattaggtaa aattaaagat
      301 ataaatacta ctactaaata attaactaaa ttactcctta gttacaattc cctccattat
      361 caaatactgt ttaaggaaag ctctataaac ataatatcct tggatacatc agtataaata
      421 aataaatggg tataataata aagttaattc aaagtgcatt atgctgctta tttcttctgt
      481 ctttggctgt aaagaatcat gctgctgtta ttgacgtaaa aactaaaggt gctaagggag
      541 atggagtaac cgatgatggt ccggtgataa tgaacgcatg gaacgaagca tgtggaggag
      601 caccaccaaa cacactattg tttccaccag ggacatatat ggcctttcct catattaaac
      661 tgactggtcc atgtaagggt ccgatagaga tcaaggctac aggtgcaacg ataaaggccc
      721 cgtctgacct aacactgttt aaaaaagaca cttggatcta catctcgttt gtcgatggat
      781 taactatgac cggtggtact tttgatggcc aaggacaaca atcatggaga actaaaaatt
      841 gtaataacga taaagcggct tgcacaaagc cagtcaattt gagattgcgt cacgttagtc
      901 actcattgat caaagatgtg acgtctattc atagtaaacg tttccacatc gctatgatgg
      961 gttgtgacaa cacgacactg gaccacatca ccatcaatgc tccgggagac agtgtcaaca
     1021 ctgatggagt tcacacatcc aaattaaacg ggcttaaaat cctaaactcg gatataaaaa
     1081 cgggcgatga ttgcatttct tttggggagg gaagcaagaa catccacgtg gaaaaagtga
     1141 cgtgtggacc aggacatggc tttagtattg gaagtttagg taattcccca aatgaagaac
     1201 ctgtacaagg aatttgggtc aagaactgca ccctagctcg caccgataac ggagtcagga
     1261 tcaagacttg gcctggtggt tacccgggaa ctgttagcga cgtgcatttt gaagatattg
     1321 ttgtcgacaa agtagcaaat ccgattatta tcgatcaaaa ttattgccct tttcgttctt
     1381 gtgtgcagac aagtggtccg tcaaaagtga agatatcgga tgtgagcttt aggaatatca
     1441 aaggaacatc aacaacacaa atttcgttga aacttaattg tagcgcagag gcaccctgca
     1501 tcaatgttga gttggataat gtcaacttgg ttcacacgcg gggaccacct gctaaatctc
     1561 gatgttttaa tatcaagcct aaaatcgttg gtcaagttgt cccaccagct tgttcagcct
     1621 gatgatcgat gaacataatc tgggtacatg gcaaattaac atgaatacga tccatatttt
     1681 taatgttgaa tattgtacat aataactaca ta
//
LOCUS       XM_071830566            1517 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polygalacturonase-like
            (LOC139840302), transcript variant X2, mRNA.
ACCESSION   XM_071830566
VERSION     XM_071830566.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1517
                     /gene="LOC139840302"
                     /note="polygalacturonase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840302"
     CDS             375..1427
                     /gene="LOC139840302"
                     /codon_start=1
                     /product="polygalacturonase-like isoform X2"
                     /protein_id="XP_071686667.1"
                     /db_xref="GeneID:139840302"
                     /translation="MNAWNEACGGAPPNTLLFPPGTYMAFPHIKLTGPCKGPIEIKAT
                     GATIKAPSDLTLFKKDTWIYISFVDGLTMTGGTFDGQGQQSWRTKNCNNDKAACTKPV
                     NLRLRHVSHSLIKDVTSIHSKRFHIAMMGCDNTTLDHITINAPGDSVNTDGVHTSKLN
                     GLKILNSDIKTGDDCISFGEGSKNIHVEKVTCGPGHGFSIGSLGNSPNEEPVQGIWVK
                     NCTLARTDNGVRIKTWPGGYPGTVSDVHFEDIVVDKVANPIIIDQNYCPFRSCVQTSG
                     PSKVKISDVSFRNIKGTSTTQISLKLNCSAEAPCINVELDNVNLVHTRGPPAKSRCFN
                     IKPKIVGQVVPPACSA"
     misc_feature    375..1418
                     /gene="LOC139840302"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 ttataaattt ttacaacaaa gattcacttg aagatgataa atctattgcc gataatgtgg
       61 gaaagaacga tgataatgtt gtgaaagatg aggtgctaaa gatttgaagg tgtaagtaaa
      121 acttagctct gatcaattgg gcatttagag atttaaaaaa atcaatagaa catcatcatg
      181 acatcatcaa cacgctaatt gtttagttta atctcaatgt tatatgaagc ctaattaacg
      241 gaaagagagg caaagcgcgt acgtacactt catgcccgtg aaaaccacct gcgataacga
      301 atcatgctgc tgttattgac gtaaaaacta aaggtgctaa gggagatgga gtaaccgatg
      361 atggtccggt gataatgaac gcatggaacg aagcatgtgg aggagcacca ccaaacacac
      421 tattgtttcc accagggaca tatatggcct ttcctcatat taaactgact ggtccatgta
      481 agggtccgat agagatcaag gctacaggtg caacgataaa ggccccgtct gacctaacac
      541 tgtttaaaaa agacacttgg atctacatct cgtttgtcga tggattaact atgaccggtg
      601 gtacttttga tggccaagga caacaatcat ggagaactaa aaattgtaat aacgataaag
      661 cggcttgcac aaagccagtc aatttgagat tgcgtcacgt tagtcactca ttgatcaaag
      721 atgtgacgtc tattcatagt aaacgtttcc acatcgctat gatgggttgt gacaacacga
      781 cactggacca catcaccatc aatgctccgg gagacagtgt caacactgat ggagttcaca
      841 catccaaatt aaacgggctt aaaatcctaa actcggatat aaaaacgggc gatgattgca
      901 tttcttttgg ggagggaagc aagaacatcc acgtggaaaa agtgacgtgt ggaccaggac
      961 atggctttag tattggaagt ttaggtaatt ccccaaatga agaacctgta caaggaattt
     1021 gggtcaagaa ctgcacccta gctcgcaccg ataacggagt caggatcaag acttggcctg
     1081 gtggttaccc gggaactgtt agcgacgtgc attttgaaga tattgttgtc gacaaagtag
     1141 caaatccgat tattatcgat caaaattatt gcccttttcg ttcttgtgtg cagacaagtg
     1201 gtccgtcaaa agtgaagata tcggatgtga gctttaggaa tatcaaagga acatcaacaa
     1261 cacaaatttc gttgaaactt aattgtagcg cagaggcacc ctgcatcaat gttgagttgg
     1321 ataatgtcaa cttggttcac acgcggggac cacctgctaa atctcgatgt tttaatatca
     1381 agcctaaaat cgttggtcaa gttgtcccac cagcttgttc agcctgatga tcgatgaaca
     1441 taatctgggt acatggcaaa ttaacatgaa tacgatccat atttttaatg ttgaatattg
     1501 tacataataa ctacata
//
LOCUS       XM_071830567            1585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polygalacturonase-like
            (LOC139840302), transcript variant X3, mRNA.
ACCESSION   XM_071830567
VERSION     XM_071830567.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1585
                     /gene="LOC139840302"
                     /note="polygalacturonase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840302"
     CDS             443..1495
                     /gene="LOC139840302"
                     /codon_start=1
                     /product="polygalacturonase-like isoform X2"
                     /protein_id="XP_071686668.1"
                     /db_xref="GeneID:139840302"
                     /translation="MNAWNEACGGAPPNTLLFPPGTYMAFPHIKLTGPCKGPIEIKAT
                     GATIKAPSDLTLFKKDTWIYISFVDGLTMTGGTFDGQGQQSWRTKNCNNDKAACTKPV
                     NLRLRHVSHSLIKDVTSIHSKRFHIAMMGCDNTTLDHITINAPGDSVNTDGVHTSKLN
                     GLKILNSDIKTGDDCISFGEGSKNIHVEKVTCGPGHGFSIGSLGNSPNEEPVQGIWVK
                     NCTLARTDNGVRIKTWPGGYPGTVSDVHFEDIVVDKVANPIIIDQNYCPFRSCVQTSG
                     PSKVKISDVSFRNIKGTSTTQISLKLNCSAEAPCINVELDNVNLVHTRGPPAKSRCFN
                     IKPKIVGQVVPPACSA"
     misc_feature    443..1486
                     /gene="LOC139840302"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 ttataaattt ttacaacaaa gattcacttg aagatgataa atctattgcc gataatgtgg
       61 gaaagaacga tgataatgtt gtgaaagatg aggtgctaaa gatttgaagg tgtaagtaaa
      121 acttagctct gatcaattgg gcatttagag atttaaaaaa atcaatagaa catcatcatg
      181 acatcatcaa cacgctaatt gtttagttta atctcaatgt tatatgaagc ctaattaacg
      241 gaaagagagg caaagcgcaa tcatgctgct gttattgacg taaaaactaa aggtgctaag
      301 ggagatggag taaccgatga tggtccggta atatatattc ttctcatctt atgtgtttct
      361 tacacgtaca ttaattaatg ttttatgacg attattaata ctgtaacgtt aatccttgtc
      421 aacgagttgc aattaggtga taatgaacgc atggaacgaa gcatgtggag gagcaccacc
      481 aaacacacta ttgtttccac cagggacata tatggccttt cctcatatta aactgactgg
      541 tccatgtaag ggtccgatag agatcaaggc tacaggtgca acgataaagg ccccgtctga
      601 cctaacactg tttaaaaaag acacttggat ctacatctcg tttgtcgatg gattaactat
      661 gaccggtggt acttttgatg gccaaggaca acaatcatgg agaactaaaa attgtaataa
      721 cgataaagcg gcttgcacaa agccagtcaa tttgagattg cgtcacgtta gtcactcatt
      781 gatcaaagat gtgacgtcta ttcatagtaa acgtttccac atcgctatga tgggttgtga
      841 caacacgaca ctggaccaca tcaccatcaa tgctccggga gacagtgtca acactgatgg
      901 agttcacaca tccaaattaa acgggcttaa aatcctaaac tcggatataa aaacgggcga
      961 tgattgcatt tcttttgggg agggaagcaa gaacatccac gtggaaaaag tgacgtgtgg
     1021 accaggacat ggctttagta ttggaagttt aggtaattcc ccaaatgaag aacctgtaca
     1081 aggaatttgg gtcaagaact gcaccctagc tcgcaccgat aacggagtca ggatcaagac
     1141 ttggcctggt ggttacccgg gaactgttag cgacgtgcat tttgaagata ttgttgtcga
     1201 caaagtagca aatccgatta ttatcgatca aaattattgc ccttttcgtt cttgtgtgca
     1261 gacaagtggt ccgtcaaaag tgaagatatc ggatgtgagc tttaggaata tcaaaggaac
     1321 atcaacaaca caaatttcgt tgaaacttaa ttgtagcgca gaggcaccct gcatcaatgt
     1381 tgagttggat aatgtcaact tggttcacac gcggggacca cctgctaaat ctcgatgttt
     1441 taatatcaag cctaaaatcg ttggtcaagt tgtcccacca gcttgttcag cctgatgatc
     1501 gatgaacata atctgggtac atggcaaatt aacatgaata cgatccatat ttttaatgtt
     1561 gaatattgta cataataact acata
//
LOCUS       XM_071830568            1476 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polygalacturonase-like
            (LOC139840302), transcript variant X4, mRNA.
ACCESSION   XM_071830568
VERSION     XM_071830568.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1476
                     /gene="LOC139840302"
                     /note="polygalacturonase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840302"
     CDS             334..1386
                     /gene="LOC139840302"
                     /codon_start=1
                     /product="polygalacturonase-like isoform X2"
                     /protein_id="XP_071686669.1"
                     /db_xref="GeneID:139840302"
                     /translation="MNAWNEACGGAPPNTLLFPPGTYMAFPHIKLTGPCKGPIEIKAT
                     GATIKAPSDLTLFKKDTWIYISFVDGLTMTGGTFDGQGQQSWRTKNCNNDKAACTKPV
                     NLRLRHVSHSLIKDVTSIHSKRFHIAMMGCDNTTLDHITINAPGDSVNTDGVHTSKLN
                     GLKILNSDIKTGDDCISFGEGSKNIHVEKVTCGPGHGFSIGSLGNSPNEEPVQGIWVK
                     NCTLARTDNGVRIKTWPGGYPGTVSDVHFEDIVVDKVANPIIIDQNYCPFRSCVQTSG
                     PSKVKISDVSFRNIKGTSTTQISLKLNCSAEAPCINVELDNVNLVHTRGPPAKSRCFN
                     IKPKIVGQVVPPACSA"
     misc_feature    334..1377
                     /gene="LOC139840302"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 ttataaattt ttacaacaaa gattcacttg aagatgataa atctattgcc gataatgtgg
       61 gaaagaacga tgataatgtt gtgaaagatg aggtgctaaa gatttgaagg tgtaagtaaa
      121 acttagctct gatcaattgg gcatttagag atttaaaaaa atcaatagaa catcatcatg
      181 acatcatcaa cacgctaatt gtttagttta atctcaatgt tatatgaagc ctaattaacg
      241 gaaagagagg caaagcgcaa tcatgctgct gttattgacg taaaaactaa aggtgctaag
      301 ggagatggag taaccgatga tggtccggtg ataatgaacg catggaacga agcatgtgga
      361 ggagcaccac caaacacact attgtttcca ccagggacat atatggcctt tcctcatatt
      421 aaactgactg gtccatgtaa gggtccgata gagatcaagg ctacaggtgc aacgataaag
      481 gccccgtctg acctaacact gtttaaaaaa gacacttgga tctacatctc gtttgtcgat
      541 ggattaacta tgaccggtgg tacttttgat ggccaaggac aacaatcatg gagaactaaa
      601 aattgtaata acgataaagc ggcttgcaca aagccagtca atttgagatt gcgtcacgtt
      661 agtcactcat tgatcaaaga tgtgacgtct attcatagta aacgtttcca catcgctatg
      721 atgggttgtg acaacacgac actggaccac atcaccatca atgctccggg agacagtgtc
      781 aacactgatg gagttcacac atccaaatta aacgggctta aaatcctaaa ctcggatata
      841 aaaacgggcg atgattgcat ttcttttggg gagggaagca agaacatcca cgtggaaaaa
      901 gtgacgtgtg gaccaggaca tggctttagt attggaagtt taggtaattc cccaaatgaa
      961 gaacctgtac aaggaatttg ggtcaagaac tgcaccctag ctcgcaccga taacggagtc
     1021 aggatcaaga cttggcctgg tggttacccg ggaactgtta gcgacgtgca ttttgaagat
     1081 attgttgtcg acaaagtagc aaatccgatt attatcgatc aaaattattg cccttttcgt
     1141 tcttgtgtgc agacaagtgg tccgtcaaaa gtgaagatat cggatgtgag ctttaggaat
     1201 atcaaaggaa catcaacaac acaaatttcg ttgaaactta attgtagcgc agaggcaccc
     1261 tgcatcaatg ttgagttgga taatgtcaac ttggttcaca cgcggggacc acctgctaaa
     1321 tctcgatgtt ttaatatcaa gcctaaaatc gttggtcaag ttgtcccacc agcttgttca
     1381 gcctgatgat cgatgaacat aatctgggta catggcaaat taacatgaat acgatccata
     1441 tttttaatgt tgaatattgt acataataac tacata
//
LOCUS       XM_071830569            1561 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA polymerase delta small
            subunit (LOC139840305), mRNA.
ACCESSION   XM_071830569
VERSION     XM_071830569.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1561
                     /gene="LOC139840305"
                     /note="DNA polymerase delta small subunit; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840305"
     CDS             62..1378
                     /gene="LOC139840305"
                     /codon_start=1
                     /product="DNA polymerase delta small subunit"
                     /protein_id="XP_071686670.1"
                     /db_xref="GeneID:139840305"
                     /translation="MDIETASLHRKQSLYHSMDEIFEIQKEMYKGQQYSQIYYIRLHL
                     IRTLIHSLLPNWKPHLPVCTVLGLEEGKQCIIVGTLYKHMKLKPTILSEYSKERSATP
                     LVIPDNFVHPDDNLVLEDESGRVNLKGDVLSPSVYVTGNVVAIHGKETSGGDFIVEDI
                     LEPGLPPQFDLPNNLGEEKYVVLVSGLNVGSSSSNPLQLQLLVDHITGHLGDEKEQSL
                     AAQIVQVVVAGNSVEVQNGLLNGQNLAPKDQSKLSEPIKELDIFLTQIAAGIPIDIMA
                     GYNDPANFALPQQPLNRCLFPGSSAYNTFRSCTNPHLFDVDNVRFLGTSGQNIDDLKK
                     YSEAKDTLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQDKFAT
                     RIMKGSEGQVVRLISIPKFSETGIAVMVNLKNLECHTLSFGTSLSS"
     misc_feature    158..541
                     /gene="LOC139840305"
                     /note="DNA polymerase delta subunit OB-fold domain;
                     Region: DNA_pol_D_N; pfam18018"
                     /db_xref="CDD:436215"
     misc_feature    599..1357
                     /gene="LOC139840305"
                     /note="PolD2 (DNA polymerase delta, subunit 2), C-terminal
                     domain; Region: MPP_PolD2_C; cd07387"
                     /db_xref="CDD:277333"
     misc_feature    order(617..619,623..625,749..751,893..898,1034..1036,
                     1217..1219)
                     /gene="LOC139840305"
                     /note="putative active site [active]"
                     /db_xref="CDD:277333"
     misc_feature    order(617..619,623..625,749..751,893..895,1034..1036,
                     1217..1219)
                     /gene="LOC139840305"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:277333"
     misc_feature    order(647..652,659..661,671..673,677..694,830..832,
                     842..844,851..856,863..868,1343..1357)
                     /gene="LOC139840305"
                     /note="PolD3 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:277333"
ORIGIN      
        1 cattaaacaa ttgcccccaa tttttttttt gcctccgttc gccggccgat aattctccgc
       61 catggatatc gaaacggcgt cgcttcacag aaaacaatcg ctctatcact ccatggatga
      121 aatatttgag attcagaaag agatgtataa aggtcaacaa tatagtcaaa tatattatat
      181 taggttacat ttaatcagaa ctctgattca ctctcttctt cctaattgga aacctcattt
      241 accagtatgt acggttttgg gactagagga aggtaaacag tgcattattg ttgggacact
      301 ctataaacat atgaagctca aacctaccat cctcagtgag tattcaaaag agaggtctgc
      361 gactccactt gtaatccctg ataatttcgt gcacccagat gataatttgg ttcttgaaga
      421 tgagagtgga agagtaaatc taaaaggcga cgtattatct ccgtctgtat atgtaacagg
      481 caatgttgtt gctatacacg gaaaggaaac tagtggaggt gattttattg ttgaggatat
      541 tcttgaaccc ggcttaccac cacagtttga tttaccaaat aacttaggag aagaaaagta
      601 tgtagttttg gtatctggat taaatgttgg tagcagctct tctaacccac ttcaattaca
      661 acttcttgtt gatcatatca cgggtcattt aggagatgag aaggagcaaa gcttggcagc
      721 tcaaatagtt caagtagttg ttgctgggaa ttctgttgaa gttcaaaatg ggcttcttaa
      781 tggtcagaat ctggccccca aggaccaatc aaagttatct gagccaatca aagagctgga
      841 tatctttttg actcagattg ctgcaggtat acctatagat atcatggccg gatacaatga
      901 ccctgcaaac tttgctctcc cacagcagcc tttgaacaga tgcctttttc ctggatcatc
      961 agcctataac acatttaggt cctgcactaa tcctcatctg tttgacgtgg acaatgtgag
     1021 atttcttgga acatctggtc aaaatattga cgatcttaaa aagtattcag aagcaaaaga
     1081 tacattagag ttcatggaaa gaacactgag gtggaggcac cttgcaccaa ctgcaccaaa
     1141 tacacttgga tgttatccct tcactgatag ggaccctttc ttcattgaaa gctgtccaca
     1201 cgtttacttc gttggtaatc aagataaatt tgctactcga ataatgaaag gatcagaggg
     1261 tcaggtagtg agactcatta gcattccaaa atttagtgaa acaggcattg ctgttatggt
     1321 gaacctgaag aacctcgagt gccacactct cagctttggt acttcgctaa gctcttaacg
     1381 tgttatgttt ctactcattt agttggttta gaggtatgaa ttactgtaag ttactgatgc
     1441 acatgactgg ttaaaaaatt aggcgttggt tggcacgttt taagaattgt atttaacttt
     1501 ttaagtactc agatccttgt tttaacgatg tgaattttta ttacaagtta tgtcaaattg
     1561 a
//
LOCUS       XM_071830570             864 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ras-related protein
            RABA6a-like (LOC139840306), mRNA.
ACCESSION   XM_071830570
VERSION     XM_071830570.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..864
                     /gene="LOC139840306"
                     /note="ras-related protein RABA6a-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840306"
     CDS             97..756
                     /gene="LOC139840306"
                     /codon_start=1
                     /product="ras-related protein RABA6a-like"
                     /protein_id="XP_071686671.1"
                     /db_xref="GeneID:139840306"
                     /translation="MGSSFFEEDCDYLFKTVLIGDSAVGKSNLLSRFAKDEFHLDSKP
                     TIGVEFAYRNIKIRDKIVKAQIWDTAGQERFRAITSSYYRGALGALLVYDVTRRVTFE
                     NLRKWLHELREYGNRDMVIVLVGNKSDLVDSREVKIEDGQSLAQLEDLCFMETSAKDN
                     LNVEDAFLQMITKVFEIASQKSLEAKENEETKKVIEGKKEIIYVVDEVSATKQTSCCN
                     G"
     misc_feature    127..621
                     /gene="LOC139840306"
                     /note="Rab GTPase family 11 (Rab11)-like includes Rab11a,
                     Rab11b, and Rab25; Region: Rab11_like; cd01868"
                     /db_xref="CDD:206660"
     misc_feature    127..141
                     /gene="LOC139840306"
                     /note="Rab subfamily motif 1 (RabSF1); other site"
                     /db_xref="CDD:206660"
     misc_feature    154..177
                     /gene="LOC139840306"
                     /note="G1 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(160..180,211..213,220..222,229..231,307..309,
                     472..477,481..483,562..570)
                     /gene="LOC139840306"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206660"
     misc_feature    order(178..213,217..228)
                     /gene="LOC139840306"
                     /note="Rab subfamily motif 2 (RabSF2); other site"
                     /db_xref="CDD:206660"
     misc_feature    order(208..210,223..249)
                     /gene="LOC139840306"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(223..225,235..258,277..279,283..285)
                     /gene="LOC139840306"
                     /note="putative GEF interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206660"
     misc_feature    229..231
                     /gene="LOC139840306"
                     /note="G2 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(232..234,238..246,289..291,295..297,316..321,
                     328..330,340..342,346..357,616..618)
                     /gene="LOC139840306"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     misc_feature    order(232..237,241..243,295..300,319..321,325..327,
                     331..339)
                     /gene="LOC139840306"
                     /note="putative GDI interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206660"
     misc_feature    232..246
                     /gene="LOC139840306"
                     /note="Rab family motif 1 (RabF1); other site"
                     /db_xref="CDD:206660"
     misc_feature    283..297
                     /gene="LOC139840306"
                     /note="Rab family motif 2 (RabF2); other site"
                     /db_xref="CDD:206660"
     misc_feature    298..309
                     /gene="LOC139840306"
                     /note="G3 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    order(307..309,313..345)
                     /gene="LOC139840306"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206660"
     misc_feature    316..333
                     /gene="LOC139840306"
                     /note="Rab family motif 3 (RabF3); other site"
                     /db_xref="CDD:206660"
     misc_feature    340..354
                     /gene="LOC139840306"
                     /note="Rab family motif 4 (RabF4); other site"
                     /db_xref="CDD:206660"
     misc_feature    367..384
                     /gene="LOC139840306"
                     /note="Rab family motif 5 (RabF5); other site"
                     /db_xref="CDD:206660"
     misc_feature    451..465
                     /gene="LOC139840306"
                     /note="Rab subfamily motif 3 (RabSF3); other site"
                     /db_xref="CDD:206660"
     misc_feature    472..483
                     /gene="LOC139840306"
                     /note="G4 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    562..570
                     /gene="LOC139840306"
                     /note="G5 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    610..621
                     /gene="LOC139840306"
                     /note="Rab subfamily motif 4 (RabSF4); other site"
                     /db_xref="CDD:206660"
     polyA_site      864
                     /gene="LOC139840306"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataggactat acgtgttaag tttttcttct tcttcttctt caaaatattt cctccgttat
       61 attattatat ttgacattga aatagaaatt aaagatatgg gtagtagttt tttcgaagaa
      121 gattgcgatt acttgtttaa gacagttttg ataggagatt ctgcagttgg gaaatcaaat
      181 cttttgtcga ggtttgcaaa agatgagttt catcttgatt ccaagcccac aattggtgtt
      241 gaatttgctt atcgaaatat taaaatcaga gataagattg ttaaagctca gatatgggac
      301 accgcgggtc aagaaagatt cagagcgata actagctcat attatcgtgg ggcattgggc
      361 gcattgttgg tctacgacgt aacacgaagg gtgacatttg agaacttgag gaaatggtta
      421 cacgagctta gagaatatgg caatcgcgac atggtaattg ttcttgttgg caataaatcg
      481 gatttggttg attcgagaga ggtcaaaatc gaagatggtc aaagtcttgc ccaattagaa
      541 gatttatgtt ttatggaaac atctgcaaag gataatttga atgtagaaga tgcatttctt
      601 caaatgatca caaaagtttt tgaaattgca agtcagaaaa gtcttgaagc taaagaaaat
      661 gaagaaacaa agaaagttat agaaggaaaa aaagaaatta tttatgttgt tgatgaggtg
      721 agtgctacta aacaaactag ttgttgtaat ggttgattaa aaattgctca tttgttgata
      781 ttgacacttc tgtataaagt gagtatgaat gaccatatta aaagcaactt tatcgattca
      841 aatacaagaa acatctcatc cgaa
//
LOCUS       XM_071830572            1444 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840307), mRNA.
ACCESSION   XM_071830572
VERSION     XM_071830572.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1444
                     /gene="LOC139840307"
                     /note="uncharacterized LOC139840307; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840307"
     CDS             145..1188
                     /gene="LOC139840307"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686673.1"
                     /db_xref="GeneID:139840307"
                     /translation="MAKYGEGDKRWIVEDRPDGANVHNWHWAETDCMQWSKDLLSKLL
                     SDHVILSGEGNLFIKTKKIEKIEGEAYVNVRKGKIIPGYELSVFINWQGEVKDNEGKS
                     LLIADGVVEIPYISDENADEDPDIRVIVKDEGPIGRRLKDAFLIKGKEFVLNQVRVYV
                     DAMAKGGPAKDELEVKKTSAKSAVVAVEAKPKGEPVVKKVEVKEKRKEGFKTIKMTEK
                     FSCRASNMYEILMDENRWKGFTQSNAKISKEVGGEISIFDGSVTGTNLELQEGKLIVQ
                     KWRFGNWPDGLHSTVRLVLEEPEPGVTVVKLTQTDVPEEDRYGNSTVVENTERGWRDL
                     IFHKIRAVFGFGV"
     misc_feature    229..645
                     /gene="LOC139840307"
                     /note="Activator of Hsp90 ATPase, N-terminal; Region:
                     Aha1_N; pfam09229"
                     /db_xref="CDD:462716"
     misc_feature    778..1179
                     /gene="LOC139840307"
                     /note="Putative hydrophobic ligand-binding SRPBCC domain
                     of the Hsp90 co-chaperone Aha1 and related proteins;
                     Region: SRPBCC_Aha1; cd08892"
                     /db_xref="CDD:176901"
     misc_feature    order(781..783,787..789,793..795,820..828,832..837,
                     850..852,874..876,898..900,904..906,910..912,916..918,
                     922..924,928..933,937..939,946..948,964..966,970..975,
                     1012..1017,1021..1023,1027..1029,1060..1062,1066..1068,
                     1072..1074,1078..1080,1090..1092,1114..1137,1144..1152,
                     1159..1161)
                     /gene="LOC139840307"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:176901"
     misc_feature    order(937..939,973..975,1012..1014,1045..1050)
                     /gene="LOC139840307"
                     /note="putative Hsp90 binding residues [polypeptide
                     binding]; other site"
                     /db_xref="CDD:176901"
ORIGIN      
        1 aactctctag aatattcttc tcccactaat tgaaacctct agatacacac acacatatat
       61 ctatatctcc tccactagca accaatcgcc gtcgtctaaa tctccacaca cactaatttc
      121 acacactaaa ccctaattca acgaatggcg aaatacggcg aaggtgataa acgttggatc
      181 gttgaagaca gacctgacgg agctaacgta cacaattggc actgggcgga aactgattgt
      241 atgcagtggt caaaggattt actatccaaa ttactttcag atcatgtaat tttatcaggt
      301 gaaggtaatt tgttcattaa gactaaaaaa attgaaaaaa ttgaaggtga agcttatgtg
      361 aatgtacgga aggggaaaat tatacctggt tatgaattaa gtgtgtttat taattggcaa
      421 ggtgaagtta aggataatga gggcaaatca ttgttgattg ctgatggtgt tgttgagatt
      481 ccgtatattt cagatgagaa tgctgatgag gatcctgata ttagggttat tgtgaaagat
      541 gaagggccaa ttggtaggag attaaaagat gcttttctga ttaaagggaa ggagtttgtg
      601 ttgaatcaag ttagggttta tgttgatgct atggctaaag gtggaccagc taaagatgaa
      661 ttggaagtga agaagacgag tgcgaaatct gcggtggtgg cggtggaggc gaaaccgaaa
      721 ggggaaccgg tggttaagaa ggtggaagtg aaggagaaga ggaaggaagg gtttaagacg
      781 ataaagatga cggagaagtt tagttgcagg gcgagtaata tgtatgagat attgatggat
      841 gagaatagat ggaaagggtt tacgcagagt aatgcgaaga ttagtaagga agttggtggt
      901 gagattagta tttttgatgg gtcagttaca gggactaatt tggagttgca ggaaggtaaa
      961 ttgattgtgc agaaatggag gtttggaaac tggcctgatg gtcttcattc tacggtgagg
     1021 ttggttctag aagagcctga acctggagtt acagttgtga agctgactca aactgatgtt
     1081 ccagaggaag acaggtacgg aaattcaact gtagtggaga ataccgagag aggatggcgg
     1141 gatctcatct ttcacaagat aagggcggtt ttcggctttg gtgtttaaaa acatccattt
     1201 cctatctgct gaaatgtaaa agtcgtgagt aataaatttc attatcgttg aatgacctga
     1261 atattgctgg gtccatcatt agtgtgtcac atttgtctgt ctgtctgaac tctacagagt
     1321 cgattttgtt gaatcttgaa atgtatgatg aattggtttg tctttgtttt agttttctgc
     1381 atcacttctt tacattaagt ttggatatcg tactttacta cgcaattgtt gtgtcacatg
     1441 caaa
//
LOCUS       XM_071830573            3148 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gamma-tubulin complex
            component 3 (LOC139840308), mRNA.
ACCESSION   XM_071830573
VERSION     XM_071830573.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3148
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3148
                     /gene="LOC139840308"
                     /note="gamma-tubulin complex component 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840308"
     CDS             4..2601
                     /gene="LOC139840308"
                     /codon_start=1
                     /product="gamma-tubulin complex component 3"
                     /protein_id="XP_071686674.1"
                     /db_xref="GeneID:139840308"
                     /translation="MEDDHRVGDLIRELVHRLNNNSPSSSSPSNSNPNPNPSNVKYAT
                     RILSSRMTPSITADEAAMAYSIKSHLVKQGKLSDALSFADLYSKFASKIGTGSVKNKW
                     SVLYLLKVISEDRKCNRKVDSSFSGGLPVLFELQSNGNVRKDNRLGQTIDDNAVSFGN
                     GNVHGNSVRDSNSKILGNGGVLLVSKDSDNLQDMAYKEFAMIVKEENVVSEEVLVRDV
                     LYACQGIDGKYLLFDESVDGYVLPETIRVPKPTKIMIRKLCELGWLFRKVKGYISDSM
                     EKFHDEDVGTVAQAFCAALQDELSEYYKLLAVLQAQSMNPIPLVSENASSGNYLSLRR
                     LSVWFAEPMVKMRLMAVLVDSCKDLKGGAMAGAIHMHAQHGDPLLHDFMKRLLRRVCS
                     PLFEMVRSWVLEGELEDIFSEFFVLGQSVKGESLWREGYRLHSAMLPSFISPSLARRI
                     LRTGKSINFLRVCCEDRSWADAATQAAAATGTTTRRGGLGYGETDALESLVTEAAKRI
                     DKHLMDVVYNQYRFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLAG
                     LLESAIRSSNAQYDDPDILDRLRVKMMPHNTGDRGWDVFSLDYDARIPLNTVFTESIM
                     AKYLRIFNFLWKLRRVEHALIGAWKTMKPNLITSHFFTKLPKAVKFRLILTSRRCQVL
                     WNEMSHFLTNLQYYIMFEVLEVSWAKFLEEMEAAKDLDDLLAAHDKYLHSIVEKSLLG
                     QRSEALYKSLFMLFDLILRFRSHADRLYEGIYDFQARTMEDKSEQQKRSNSKTSDSES
                     WLTEGRKAITERASEFLRNTGQEIDAVSKEYSSLFKGFISELPVQQHIDLKFLMFRLD
                     FTEFYGSAS"
     misc_feature    646..1557
                     /gene="LOC139840308"
                     /note="Gamma tubulin complex component N-terminal; Region:
                     GCP_N_terminal; pfam17681"
                     /db_xref="CDD:465456"
     misc_feature    1573..2586
                     /gene="LOC139840308"
                     /note="Gamma tubulin complex component C-terminal; Region:
                     GCP_C_terminal; pfam04130"
                     /db_xref="CDD:461187"
ORIGIN      
        1 tccatggagg acgaccaccg tgtcggagat ctcattcgtg aattagtcca ccgtctaaac
       61 aataactcac cttcttcatc ctcaccttca aactcaaacc ctaaccctaa tcctagcaat
      121 gttaagtacg ctactcgcat tttatccagc cgaatgacgc cgtcgatcac tgcagatgaa
      181 gctgcaatgg cgtattcgat caaaagtcat ctcgttaaac aaggtaaatt gtctgatgca
      241 ttatcatttg ccgatcttta ttctaaattc gcttccaaaa ttggtactgg tagtgttaaa
      301 aacaagtggt ctgtacttta tttacttaaa gttatatccg aagatcgtaa gtgtaatagg
      361 aaagtggatt ctagcttctc tggtggactg ccagtgttgt ttgagcttca aagtaatggt
      421 aatgttagga aggataatag gttagggcaa actatagatg ataatgcagt ttctttcggt
      481 aatggaaatg tacacggaaa cagtgtgcgt gatagtaatt cgaaaatttt ggggaatggt
      541 ggagtgttgt tggtttcgaa ggattctgat aatttgcagg atatggcgta taaggagttt
      601 gcgatgatag tgaaggaaga aaatgttgtg tcggaggagg ttttggttag ggacgtgttg
      661 tatgcttgtc aaggaattga tgggaagtat ttgctatttg atgagagtgt tgatggatat
      721 gtattacctg aaacaattag ggttccaaag cctactaaga taatgattcg taagctgtgt
      781 gagcttggat ggttgtttag gaaggtaaaa gggtatattt ctgatagtat ggagaagttt
      841 catgatgaag atgttggtac tgtagctcaa gcgttttgtg cagcgttgca agatgagctt
      901 tctgagtact ataagttgct agctgtactt caggcacagt caatgaaccc tatccctttg
      961 gtttcagaga atgcaagttc aggtaattat ctttcgttaa ggagactttc agtatggttt
     1021 gctgagccaa tggtcaagat gcgattgatg gctgttcttg tggacagttg taaggatttg
     1081 aagggtggtg ctatggctgg tgcaattcac atgcatgcac aacatggtga ccctcttctt
     1141 catgatttca tgaaaagatt acttcgtagg gtttgttcac ctctttttga aatggttagg
     1201 agttgggtgt tagaaggtga acttgaagat atattttccg agttttttgt tttaggtcag
     1261 tctgtaaaag gtgaatcttt atggagggaa ggttatagac tgcattctgc aatgcttcct
     1321 tcgtttattt ccccgtctct tgctagacgt atactcagaa cagggaaatc aatcaatttt
     1381 cttagggttt gttgtgagga tcgaagctgg gctgatgcag caactcaagc tgcagctgca
     1441 acggggacca caactaggag aggtggtctt ggttatggtg aaactgacgc actcgagtct
     1501 ttagtcaccg aagcagcaaa aagaatcgat aagcatttaa tggatgtggt ttacaatcaa
     1561 tacaggttta aggagcattg tcttgctata aaacggtatc tgttactagg gcaaggtgat
     1621 tttgttcagt atttgatgga tattgttggg cctgagttat cagagcctgc taatactatc
     1681 agttcattta aacttgctgg tttgttagag agtgcaattc ggtcatcaaa tgcacaatat
     1741 gatgatcctg atattttgga tagattaagg gttaagatga tgccacataa tactggagac
     1801 agaggttggg atgtattttc tttagattat gatgcacgaa ttccattaaa tactgtgttt
     1861 acagaatcta taatggcaaa gtatttaaga atctttaact ttttgtggaa gcttagaagg
     1921 gtagagcacg cgcttattgg tgcttggaag acaatgaaac caaacctgat tacttctcat
     1981 tttttcacta aactaccaaa agctgttaag tttaggttaa ttttgacatc aagaagatgc
     2041 caggttcttt ggaatgaaat gagtcatttt cttacaaatt tgcagtatta tataatgttt
     2101 gaggttttgg aggtttcatg ggcgaagttt ttagaagaaa tggaagcagc taaagatctt
     2161 gatgatctac ttgcagcaca tgataagtac ctgcactcga ttgtagagaa gtcactactt
     2221 ggacaacgat ctgaagctct ttataaaagt ctatttatgt tgtttgatct tatattgcgg
     2281 tttcgtagtc atgctgatcg gctttatgaa ggaatttatg actttcaagc aagaaccatg
     2341 gaagacaaat ctgaacaaca aaagcgatca aacagcaaaa catctgattc agaatcatgg
     2401 ctcactgaag gcaggaaagc aataacagaa cgtgctagcg aatttcttcg aaatacagga
     2461 caggaaatcg atgcagtttc aaaagagtac tcgtctcttt tcaagggctt catttctgag
     2521 ttacctgttc aacagcacat tgacttgaag ttcctcatgt ttcggcttga cttcacagag
     2581 ttttatggtt ctgcatccta gctcttcagt tgaaacagct tccacacaca atcaactttc
     2641 attataatct tgaagtaggc agggtgggtc ccattaatta agtggccaat attgggacat
     2701 gcagtaacct tcaatctcga gtggatacag ccgtttgtat atcacttatt tttcatagat
     2761 tagagttggt aaaacaaaac agtggtctgc acaagctcaa tgcagttgaa ttgaaggtat
     2821 catgcagtct tataaccatt ttgttcattt gtattgtttt tggtagcctg gttcaaagcc
     2881 agcaatcaca tgcttgtaga tgtgtacaat agttttgtgt tggtttgaag aaagagtgat
     2941 gggtggttat tgtgatcttt gagttttttt ttccacagat ttttgtattc aaaagttgtc
     3001 tataggttgg gtatggtttg caagttgaaa ttcagtttcc ttattgtgtt atcttgcata
     3061 cagtagtatc atggtataat gatccgctgg tactgaaaaa attagtgaat tacagattat
     3121 tattttcgct aggtttgtag ttgttggt
//
LOCUS       XM_071830574             805 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides caltractin-like
            (LOC139840309), mRNA.
ACCESSION   XM_071830574
VERSION     XM_071830574.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..805
                     /gene="LOC139840309"
                     /note="caltractin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 16 Proteins"
                     /db_xref="GeneID:139840309"
     CDS             128..634
                     /gene="LOC139840309"
                     /codon_start=1
                     /product="caltractin-like"
                     /protein_id="XP_071686675.1"
                     /db_xref="GeneID:139840309"
                     /translation="MGVYGEASRREKPRGRHQGLTPQKRQEIKEAFELFDTDGSGTID
                     AKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDFDEFVYMMTAKIGERDSKQELT
                     KAFNIIDHDKNGKISVSDIKSIAKELGEHFTDKEISEMVEEADRDRDGEVSAEEFMRM
                     MKKTSYGY"
     misc_feature    155..622
                     /gene="LOC139840309"
                     /note="centrin; Provisional; Region: PTZ00183"
                     /db_xref="CDD:185503"
     polyA_site      805
                     /gene="LOC139840309"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccctttgtaa cttatttata catgtgttag tgtgacccaa ttcaagatct tccaatttct
       61 ttgttcaagg cgtatacgta aaaaggagct gggttgttta acgattgatc caaggattta
      121 agtgaaaatg ggcgtttatg gagaagcatc gaggagagag aaacctagag gacgtcatca
      181 agggttaact ccgcagaaaa ggcaagagat caaagaagcg tttgagctat ttgatactga
      241 tggctctggc accattgatg ccaaggagtt gaatgttgca atgagggctc ttggttttga
      301 aatgacagag gagcaaatta atcaaatgat tgcggatgta gacaaagatg gcagcggtgc
      361 cattgatttc gatgaatttg tgtacatgat gactgccaaa atcggtgaga gggacagcaa
      421 acaagagctt acaaaagctt tcaacatcat tgatcatgat aaaaatggga agatatctgt
      481 ttcagatatc aagagtattg ctaaggagtt gggtgaacat tttaccgata aagagatcag
      541 cgagatggtg gaggaagcag atcgtgatcg tgatggagaa gttagtgcag aagagtttat
      601 gagaatgatg aagaaaactt cgtatggata ttaggtggac ctgaaggagt tggcttttta
      661 tgtgatgtgt acaaactcaa tatactagta ttagtccgcg attaaatcgt ttatttacta
      721 aatgactgat tatatgttta ttcttcttgt ttctgtacta tctgtatgac tgtgatcttt
      781 tgtatgtgat gtcgtgatga tgcaa
//
LOCUS       XM_071830575            1432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            SINAT2-like (LOC139840310), transcript variant X1, mRNA.
ACCESSION   XM_071830575
VERSION     XM_071830575.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1432
                     /gene="LOC139840310"
                     /note="E3 ubiquitin-protein ligase SINAT2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 56 Proteins"
                     /db_xref="GeneID:139840310"
     CDS             199..1116
                     /gene="LOC139840310"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase SINAT2-like"
                     /protein_id="XP_071686676.1"
                     /db_xref="GeneID:139840310"
                     /translation="MAPGGGVCKDVIESHPKTMKYDVSTTKIDKSITRIATGASGKHG
                     MQSTNGVHELLECPVCTTLMYPPIHQCPNGHTLCSNCKLRVHNCCPTCRLEMGNIRCL
                     ALEKVAESLELPCRHQSLGCHDIFPYYSKLKHEQNCRFRPYNCPYAGSECSVTGDIPY
                     LVAHLKDDHNVDMHDGCSFNHRYVKSNPHEVENATWMLTVFNCYGRQFCLHFEAFQLG
                     MAPVYISFLRFMGEDSEAKKFSYSLEVGGYGRKCTWQGVPRSIRDSHRKVRDSQDGLV
                     IPRNLALFFSGGDRQELKLRVSGRIWKEQ"
     misc_feature    361..477
                     /gene="LOC139840310"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; Region: RING-HC_SIAHs; cd16571"
                     /db_xref="CDD:438233"
     misc_feature    493..1092
                     /gene="LOC139840310"
                     /note="Seven in absentia protein family; Region: Sina;
                     pfam03145"
                     /db_xref="CDD:460824"
ORIGIN      
        1 cttggattct ttcatagata gtggatacaa ttatgataac cttaaaattc catctttcct
       61 tgaattctca gatgggcttt taataaactg aaacagacgt tgcttatgtc ctttaagagc
      121 tacaacactt gtgctttgat catgatttca ttgatttgag acactataac tgaattagca
      181 aatattgttc aaattcttat ggctcctggt ggtggtgttt gtaaagatgt tattgagtct
      241 caccctaaaa ctatgaagta tgacgtgtca accacgaaga tcgataaaag tattacgagg
      301 attgcaactg gagcaagcgg aaaacatgga atgcaatcaa cgaatggtgt tcatgagctt
      361 cttgaatgcc ctgtgtgcac tactttaatg tatcctccga ttcatcagtg tccaaatggg
      421 catacattgt gctcaaactg caaacttcga gtgcacaatt gttgcccaac atgccgtctc
      481 gaaatgggaa acatacggtg tttggcgttg gaaaaagtag cggaatcttt ggaacttcca
      541 tgccgacacc aaagtcttgg atgccatgat atctttcctt actacagcaa gctgaaacac
      601 gagcaaaact gccggtttcg cccttacaat tgtccttatg ccggatctga gtgttcggtt
      661 acaggtgata tcccgtatct tgtggcacat ttgaaggatg atcataacgt ggatatgcat
      721 gatggatgca gttttaacca tcgttatgtc aaatctaatc cacatgaagt tgaaaatgcg
      781 acatggatgc taactgtatt taattgctat gggagacagt tttgtttaca ctttgaggca
      841 tttcagctgg gaatggcacc agtttacatt tcatttctac ggttcatggg tgaggacagt
      901 gaagcaaaga agtttagcta ctcgttagaa gtgggagggt acggacgtaa atgcacatgg
      961 caaggtgttc caagaagcat acgtgatagc catcgaaaag ttcgtgatag tcaagatgga
     1021 ttagtcattc caagaaactt agctctcttt ttctctggtg gggacaggca agaactcaag
     1081 ttaagagtta gcggccgtat atggaaagaa cagtgagtca aacgtcaaag tcaaaagtta
     1141 atgggttgga atttgtatag tttgagacta ccaaggttga ttggatggac atgatcagtg
     1201 atcaggctcg aagacctcta gattggttct tgagtaaacc caaataggga ttatgtgtag
     1261 aagaatcgga aaattatgat cttgatcttg attcatgttg taaaagttat ggtcttggag
     1321 tttaatttat tctgtattct gtgttggtat tttaaaacat gaattctaat gtagtatggt
     1381 tgttggaatt gggcgtgttc aaaacttagt ctgttatata aaccagtgat ta
//
LOCUS       XM_071830576            1364 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            SINAT2-like (LOC139840310), transcript variant X2, mRNA.
ACCESSION   XM_071830576
VERSION     XM_071830576.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1364
                     /gene="LOC139840310"
                     /note="E3 ubiquitin-protein ligase SINAT2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 54 Proteins"
                     /db_xref="GeneID:139840310"
     CDS             131..1048
                     /gene="LOC139840310"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase SINAT2-like"
                     /protein_id="XP_071686677.1"
                     /db_xref="GeneID:139840310"
                     /translation="MAPGGGVCKDVIESHPKTMKYDVSTTKIDKSITRIATGASGKHG
                     MQSTNGVHELLECPVCTTLMYPPIHQCPNGHTLCSNCKLRVHNCCPTCRLEMGNIRCL
                     ALEKVAESLELPCRHQSLGCHDIFPYYSKLKHEQNCRFRPYNCPYAGSECSVTGDIPY
                     LVAHLKDDHNVDMHDGCSFNHRYVKSNPHEVENATWMLTVFNCYGRQFCLHFEAFQLG
                     MAPVYISFLRFMGEDSEAKKFSYSLEVGGYGRKCTWQGVPRSIRDSHRKVRDSQDGLV
                     IPRNLALFFSGGDRQELKLRVSGRIWKEQ"
     misc_feature    293..409
                     /gene="LOC139840310"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; Region: RING-HC_SIAHs; cd16571"
                     /db_xref="CDD:438233"
     misc_feature    425..1024
                     /gene="LOC139840310"
                     /note="Seven in absentia protein family; Region: Sina;
                     pfam03145"
                     /db_xref="CDD:460824"
ORIGIN      
        1 catttggctt tttagggttc atgtgaagac gttgcttatg tcctttaaga gctacaacac
       61 ttgtgctttg atcatgattt cattgatttg agacactata actgaattag caaatattgt
      121 tcaaattctt atggctcctg gtggtggtgt ttgtaaagat gttattgagt ctcaccctaa
      181 aactatgaag tatgacgtgt caaccacgaa gatcgataaa agtattacga ggattgcaac
      241 tggagcaagc ggaaaacatg gaatgcaatc aacgaatggt gttcatgagc ttcttgaatg
      301 ccctgtgtgc actactttaa tgtatcctcc gattcatcag tgtccaaatg ggcatacatt
      361 gtgctcaaac tgcaaacttc gagtgcacaa ttgttgccca acatgccgtc tcgaaatggg
      421 aaacatacgg tgtttggcgt tggaaaaagt agcggaatct ttggaacttc catgccgaca
      481 ccaaagtctt ggatgccatg atatctttcc ttactacagc aagctgaaac acgagcaaaa
      541 ctgccggttt cgcccttaca attgtcctta tgccggatct gagtgttcgg ttacaggtga
      601 tatcccgtat cttgtggcac atttgaagga tgatcataac gtggatatgc atgatggatg
      661 cagttttaac catcgttatg tcaaatctaa tccacatgaa gttgaaaatg cgacatggat
      721 gctaactgta tttaattgct atgggagaca gttttgttta cactttgagg catttcagct
      781 gggaatggca ccagtttaca tttcatttct acggttcatg ggtgaggaca gtgaagcaaa
      841 gaagtttagc tactcgttag aagtgggagg gtacggacgt aaatgcacat ggcaaggtgt
      901 tccaagaagc atacgtgata gccatcgaaa agttcgtgat agtcaagatg gattagtcat
      961 tccaagaaac ttagctctct ttttctctgg tggggacagg caagaactca agttaagagt
     1021 tagcggccgt atatggaaag aacagtgagt caaacgtcaa agtcaaaagt taatgggttg
     1081 gaatttgtat agtttgagac taccaaggtt gattggatgg acatgatcag tgatcaggct
     1141 cgaagacctc tagattggtt cttgagtaaa cccaaatagg gattatgtgt agaagaatcg
     1201 gaaaattatg atcttgatct tgattcatgt tgtaaaagtt atggtcttgg agtttaattt
     1261 attctgtatt ctgtgttggt attttaaaac atgaattcta atgtagtatg gttgttggaa
     1321 ttgggcgtgt tcaaaactta gtctgttata taaaccagtg atta
//
LOCUS       XM_071830577            1350 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides E3 ubiquitin-protein ligase
            SINAT2-like (LOC139840310), transcript variant X3, mRNA.
ACCESSION   XM_071830577
VERSION     XM_071830577.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1350
                     /gene="LOC139840310"
                     /note="E3 ubiquitin-protein ligase SINAT2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 54 Proteins"
                     /db_xref="GeneID:139840310"
     CDS             117..1034
                     /gene="LOC139840310"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase SINAT2-like"
                     /protein_id="XP_071686678.1"
                     /db_xref="GeneID:139840310"
                     /translation="MAPGGGVCKDVIESHPKTMKYDVSTTKIDKSITRIATGASGKHG
                     MQSTNGVHELLECPVCTTLMYPPIHQCPNGHTLCSNCKLRVHNCCPTCRLEMGNIRCL
                     ALEKVAESLELPCRHQSLGCHDIFPYYSKLKHEQNCRFRPYNCPYAGSECSVTGDIPY
                     LVAHLKDDHNVDMHDGCSFNHRYVKSNPHEVENATWMLTVFNCYGRQFCLHFEAFQLG
                     MAPVYISFLRFMGEDSEAKKFSYSLEVGGYGRKCTWQGVPRSIRDSHRKVRDSQDGLV
                     IPRNLALFFSGGDRQELKLRVSGRIWKEQ"
     misc_feature    279..395
                     /gene="LOC139840310"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; Region: RING-HC_SIAHs; cd16571"
                     /db_xref="CDD:438233"
     misc_feature    411..1010
                     /gene="LOC139840310"
                     /note="Seven in absentia protein family; Region: Sina;
                     pfam03145"
                     /db_xref="CDD:460824"
ORIGIN      
        1 gttcttaact ttgtacgttg cttatgtcct ttaagagcta caacacttgt gctttgatca
       61 tgatttcatt gatttgagac actataactg aattagcaaa tattgttcaa attcttatgg
      121 ctcctggtgg tggtgtttgt aaagatgtta ttgagtctca ccctaaaact atgaagtatg
      181 acgtgtcaac cacgaagatc gataaaagta ttacgaggat tgcaactgga gcaagcggaa
      241 aacatggaat gcaatcaacg aatggtgttc atgagcttct tgaatgccct gtgtgcacta
      301 ctttaatgta tcctccgatt catcagtgtc caaatgggca tacattgtgc tcaaactgca
      361 aacttcgagt gcacaattgt tgcccaacat gccgtctcga aatgggaaac atacggtgtt
      421 tggcgttgga aaaagtagcg gaatctttgg aacttccatg ccgacaccaa agtcttggat
      481 gccatgatat ctttccttac tacagcaagc tgaaacacga gcaaaactgc cggtttcgcc
      541 cttacaattg tccttatgcc ggatctgagt gttcggttac aggtgatatc ccgtatcttg
      601 tggcacattt gaaggatgat cataacgtgg atatgcatga tggatgcagt tttaaccatc
      661 gttatgtcaa atctaatcca catgaagttg aaaatgcgac atggatgcta actgtattta
      721 attgctatgg gagacagttt tgtttacact ttgaggcatt tcagctggga atggcaccag
      781 tttacatttc atttctacgg ttcatgggtg aggacagtga agcaaagaag tttagctact
      841 cgttagaagt gggagggtac ggacgtaaat gcacatggca aggtgttcca agaagcatac
      901 gtgatagcca tcgaaaagtt cgtgatagtc aagatggatt agtcattcca agaaacttag
      961 ctctcttttt ctctggtggg gacaggcaag aactcaagtt aagagttagc ggccgtatat
     1021 ggaaagaaca gtgagtcaaa cgtcaaagtc aaaagttaat gggttggaat ttgtatagtt
     1081 tgagactacc aaggttgatt ggatggacat gatcagtgat caggctcgaa gacctctaga
     1141 ttggttcttg agtaaaccca aatagggatt atgtgtagaa gaatcggaaa attatgatct
     1201 tgatcttgat tcatgttgta aaagttatgg tcttggagtt taatttattc tgtattctgt
     1261 gttggtattt taaaacatga attctaatgt agtatggttg ttggaattgg gcgtgttcaa
     1321 aacttagtct gttatataaa ccagtgatta
//
LOCUS       XM_071830578            1530 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein kinase
            At2g41970 (LOC139840311), transcript variant X1, mRNA.
ACCESSION   XM_071830578
VERSION     XM_071830578.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1530
                     /gene="LOC139840311"
                     /note="probable protein kinase At2g41970; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 58 Proteins"
                     /db_xref="GeneID:139840311"
     CDS             285..1391
                     /gene="LOC139840311"
                     /codon_start=1
                     /product="probable protein kinase At2g41970"
                     /protein_id="XP_071686679.1"
                     /db_xref="GeneID:139840311"
                     /translation="MSCCGGSEEDDYSGGPSNNIATAPPRGGGPPYGGSDRGEPRGAG
                     PARGGAPQKPLPIETPEVSLNELNRITNNFGQKSLVGEGSYGRVFYGKLSSEEEVAVK
                     KLDTSSSPEPDNDFVSQLSIVSRFKNEYFVELLGYCLEGNNRILIYQYATMGSLHDVL
                     HGRKGVQGAEPGPVLSWPQRVKIAYGAARGLEYLHEKVQPSIVHRDVRSSNVLLFDDF
                     QTKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLEL
                     LTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLSNDYPPKAVAKMAAVAALC
                     VQYEADFRPNMTIVVKALQPLYHQKPAGPESHAS"
     misc_feature    522..1349
                     /gene="LOC139840311"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(522..533,540..542,546..548,582..584,588..590,
                     678..680,726..737,900..902,912..917,921..923,951..956)
                     /gene="LOC139840311"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 tatataacag aaaccgattt tcccgcgaac cccaaattaa caaaatcttt tctcttttga
       61 ttctctctct ctttctacaa tccggagaga ctgagaagag agagaaagag aaatcccaaa
      121 tcttcaaacc taaaattccg atcgaagatt taatcttttt gattgttgtt ggcttaaaaa
      181 tcttgacttt aaggattcat tttaggttga attgaaggaa aaaagtatat ggtttgctaa
      241 ataaagtttg tatcttttga atttttaaac cttctatttg aaggatgtct tgttgtggtg
      301 gttccgaaga ggatgattat agcggtgggc cttcaaataa tatcgcaacc gcaccacctc
      361 gaggaggagg accaccttat ggagggagtg atagaggaga gccaaggggt gcgggacccg
      421 caagaggtgg ggctcctcaa aaaccgttgc caattgaaac accagaagta tcgttgaatg
      481 agttaaatag gataacaaat aatttcggtc aaaagtcttt ggttggtgaa ggttcatatg
      541 gtcgggtttt ttatggaaag ctaagtagtg aagaagaagt agcagtaaag aagctcgata
      601 ccagttcttc acctgagccc gataatgatt ttgtatccca gttatcaata gtttcaaggt
      661 ttaaaaatga gtattttgtt gagttgctcg gttattgttt agaaggaaac aaccgcatat
      721 tgatatatca atatgcaaca atgggttctt tgcatgatgt attacatggg agaaagggtg
      781 tgcaaggtgc ggaacctggt cccgttctca gttggcctca gagagttaaa attgcatatg
      841 gtgcagcaag aggtttagag tatttacatg aaaaggttca accttcgatt gtacatagag
      901 atgttcggtc cagcaacgtt ttattgtttg atgattttca aactaagatt gccgatttca
      961 atttgagcaa tcagtcgtct gacactgcag ctcgattgca ttctactagg gtgttgggaa
     1021 cttttggtta ccatgctcca gagtatgcaa tgacagggca gataactcaa aagagtgatg
     1081 tttatagttt cggagttgtt cttttagaac ttttaacagg aaggaaaccg gttgaccaca
     1141 caatgcctaa aggtcaacaa agtctcgtta catgggcaac accaagatta agtgaagata
     1201 aagtaaagca atgcgttgat ccaaagttaa gcaatgacta ccctccaaag gcggttgcta
     1261 agatggcagc cgttgcagca ttatgtgttc aatacgaggc agatttcagg ccaaacatga
     1321 cgatagttgt caaggctttg cagccgctct accatcaaaa accagcaggc ccagagtctc
     1381 atgcttcgta accaaagttt tagaaatcat atttgagttt tgtctatgga acatagtttg
     1441 aatacactag aatcaattat ggagctacat tgttgtaatc atgatcccag aattagacct
     1501 ggtaattaga tcccatttgt ttattttcaa
//
LOCUS       XM_071830579            1440 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein kinase
            At2g41970 (LOC139840311), transcript variant X2, mRNA.
ACCESSION   XM_071830579
VERSION     XM_071830579.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1440
                     /gene="LOC139840311"
                     /note="probable protein kinase At2g41970; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 58 Proteins"
                     /db_xref="GeneID:139840311"
     CDS             195..1301
                     /gene="LOC139840311"
                     /codon_start=1
                     /product="probable protein kinase At2g41970"
                     /protein_id="XP_071686680.1"
                     /db_xref="GeneID:139840311"
                     /translation="MSCCGGSEEDDYSGGPSNNIATAPPRGGGPPYGGSDRGEPRGAG
                     PARGGAPQKPLPIETPEVSLNELNRITNNFGQKSLVGEGSYGRVFYGKLSSEEEVAVK
                     KLDTSSSPEPDNDFVSQLSIVSRFKNEYFVELLGYCLEGNNRILIYQYATMGSLHDVL
                     HGRKGVQGAEPGPVLSWPQRVKIAYGAARGLEYLHEKVQPSIVHRDVRSSNVLLFDDF
                     QTKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLEL
                     LTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLSNDYPPKAVAKMAAVAALC
                     VQYEADFRPNMTIVVKALQPLYHQKPAGPESHAS"
     misc_feature    432..1259
                     /gene="LOC139840311"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(432..443,450..452,456..458,492..494,498..500,
                     588..590,636..647,810..812,822..827,831..833,861..866)
                     /gene="LOC139840311"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 tatataacag aaaccgattt tcccgcgaac cccaaattaa caaaatcttt tctcttttga
       61 ttctctctct ctttctacaa tccggagaga ctgagaagag agagaaagag aaatcccaaa
      121 tcttcaaacc taaaattccg atcgaagatt taatcttttt gattgttgtt ggcttaaaaa
      181 tcttgacttt aaggatgtct tgttgtggtg gttccgaaga ggatgattat agcggtgggc
      241 cttcaaataa tatcgcaacc gcaccacctc gaggaggagg accaccttat ggagggagtg
      301 atagaggaga gccaaggggt gcgggacccg caagaggtgg ggctcctcaa aaaccgttgc
      361 caattgaaac accagaagta tcgttgaatg agttaaatag gataacaaat aatttcggtc
      421 aaaagtcttt ggttggtgaa ggttcatatg gtcgggtttt ttatggaaag ctaagtagtg
      481 aagaagaagt agcagtaaag aagctcgata ccagttcttc acctgagccc gataatgatt
      541 ttgtatccca gttatcaata gtttcaaggt ttaaaaatga gtattttgtt gagttgctcg
      601 gttattgttt agaaggaaac aaccgcatat tgatatatca atatgcaaca atgggttctt
      661 tgcatgatgt attacatggg agaaagggtg tgcaaggtgc ggaacctggt cccgttctca
      721 gttggcctca gagagttaaa attgcatatg gtgcagcaag aggtttagag tatttacatg
      781 aaaaggttca accttcgatt gtacatagag atgttcggtc cagcaacgtt ttattgtttg
      841 atgattttca aactaagatt gccgatttca atttgagcaa tcagtcgtct gacactgcag
      901 ctcgattgca ttctactagg gtgttgggaa cttttggtta ccatgctcca gagtatgcaa
      961 tgacagggca gataactcaa aagagtgatg tttatagttt cggagttgtt cttttagaac
     1021 ttttaacagg aaggaaaccg gttgaccaca caatgcctaa aggtcaacaa agtctcgtta
     1081 catgggcaac accaagatta agtgaagata aagtaaagca atgcgttgat ccaaagttaa
     1141 gcaatgacta ccctccaaag gcggttgcta agatggcagc cgttgcagca ttatgtgttc
     1201 aatacgaggc agatttcagg ccaaacatga cgatagttgt caaggctttg cagccgctct
     1261 accatcaaaa accagcaggc ccagagtctc atgcttcgta accaaagttt tagaaatcat
     1321 atttgagttt tgtctatgga acatagtttg aatacactag aatcaattat ggagctacat
     1381 tgttgtaatc atgatcccag aattagacct ggtaattaga tcccatttgt ttattttcaa
//
LOCUS       XM_071830580            3108 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides carbon catabolite repressor
            protein 4 homolog 1-like (LOC139840312), mRNA.
ACCESSION   XM_071830580
VERSION     XM_071830580.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3108
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3108
                     /gene="LOC139840312"
                     /note="carbon catabolite repressor protein 4 homolog
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 19 Proteins"
                     /db_xref="GeneID:139840312"
     CDS             531..2318
                     /gene="LOC139840312"
                     /codon_start=1
                     /product="carbon catabolite repressor protein 4 homolog
                     1-like"
                     /protein_id="XP_071686681.1"
                     /db_xref="GeneID:139840312"
                     /translation="MLSVLRVHLPSDIPIVGCELSPYVLLRRPDQTVFTDDVPESSPI
                     EGLFLRYKWYRIQSDKKVTICSVHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFSDAW
                     QHHRVLHERAASAVNENGNEEEEIFGRFNNNNSSSQNLSSLTNGSTPLYPAAVTQRNG
                     GETWFEVGRSKTYTPTADDIGHVLKFECVVVDVDTKLPVGPSNTILTSRVIPAPSPSP
                     RRLISVSNVDLVGNLDLDGRLSSTGTFTVLSYNILSDSYATSDLYSYCPSWALSWPYR
                     RQNLLREIVGYRADIVCLQEVQSDHFDDFFCPELDKHGYTALYKKKTAEVFNGSNVTI
                     DGCATFFRRDRFSQVKKYEVEFNKAAQSLTDALVPITQKKTALNRLVKDNVALIVVLE
                     AKFSNHGVENPGKRQLVCVANTHVNVQQELKDVKLWQVHTLLKGLEKIAASADIPMLV
                     CGDFNSTPGSAPHALLAIGKVDPMHQDLAVDPLGILRPPTKLTHSLPLVSAYSSFARI
                     GGGLGYELQKRRVDPATNEPLFTNCTRDFIGTLDYIFYSADSLSVESLLELLDEDSLR
                     KDTALPSPEWSSDHIALMAEFRCKPRTRR"
     misc_feature    531..2315
                     /gene="LOC139840312"
                     /note="Carbon catabolite repressor protein 4 homolog;
                     Provisional; Region: PLN03144"
                     /db_xref="CDD:178689"
     polyA_site      3108
                     /gene="LOC139840312"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatacgcaca atcattatat agacgggaga ccgtgataca aaagagcatc gtcgtcttca
       61 ttttttgtta tgtttgtaaa accctaactg tacaaattaa cacccaaatc caaatcaaac
      121 cgatctacat cgtcttatta atctctctta attccatctc tattcaaatt caaactttaa
      181 tcctccatct ttcaatttcc aatattcctt catttccaga tcaatcgatt acataattcc
      241 atccttcttt atctcttcaa accaatcatc cgatttccac aatcaataat tggtatcaac
      301 tccatcgcaa agttttaatt tttagatgaa attaaattag ggtttttgta tctaatcctt
      361 ttttgtagaa attgaggaag gctggcgagt gtagacgtca tgtaatggcg gatccgcctg
      421 gtttccgcca agttttcatc gtcgccggag ttcaattttt atcatttttg aaattagggt
      481 tagggtataa ttattttgat aggagaagtt atttttgtga ttaaaaaagc atgctgagcg
      541 tgctgagagt acatcttccg tccgatattc cgattgtggg ttgtgagctt tctccgtacg
      601 tgcttctccg gcgaccggac cagactgttt ttaccgatga tgtgcctgaa tcttcaccta
      661 ttgagggtct tttcttgaga tataagtggt accgtataca aagtgataag aaagttacta
      721 tatgtagcgt acatccatct gaacaagcca ctttacaatg tttagggtgt gttaaagcca
      781 aaatacctgt cgctaaaagc taccattgct cccctaaatg tttttccgac gcatggcaac
      841 accatcgcgt tctccatgaa cgtgccgcta gtgctgttaa cgaaaacgga aacgaagaag
      901 aagaaatatt cggccgattc aataacaaca atagtagttc acaaaatctc tcgagcctta
      961 caaatggttc aacaccatta tatcctgcag ccgtaacaca aagaaacggt ggtgaaacgt
     1021 ggtttgaagt cggtcggtct aaaacgtaca caccaacagc tgatgatatc ggtcatgttt
     1081 taaaatttga atgtgtggtg gttgatgttg atacgaaatt gcccgttgga ccgtcgaata
     1141 cgattttgac gtcacgtgtg atcccggccc cctccccgag cccacggcgg ttgatatctg
     1201 ttagtaatgt tgatttggta gggaatttgg atttggatgg gcggctttca tccacgggaa
     1261 cttttactgt gctgtcgtac aatatattat cggactcata tgcgacgagt gatttatata
     1321 gttattgtcc ttcgtgggct ctttcttggc cttatcgtag acaaaatttg ttgcgggaaa
     1381 ttgttggcta ccgagcagat attgtttgtc ttcaagaggt tcaaagtgat cattttgacg
     1441 attttttttg cccagagctg gacaaacatg gctatacagc tctatataag aagaaaacgg
     1501 ctgaggtttt taatggaagt aatgtgacta ttgatggatg cgctacattc ttcaggagag
     1561 acagattttc ccaagtcaaa aaatacgagg tcgaatttaa taaagctgcg caatctttaa
     1621 ctgatgcttt agttcccatt acccagaaga aaactgcgct gaatcgcctg gttaaggata
     1681 atgtcgcact cattgttgta cttgaagcaa agttcagtaa ccatggtgtc gaaaatccag
     1741 gaaaacgaca acttgtttgt gtggcaaata cacatgtgaa tgttcaacaa gaactgaagg
     1801 atgtcaaact ttggcaggtt catactctgt tgaaaggttt ggaaaagata gctgccagtg
     1861 cagatatacc aatgttagtg tgtggggatt ttaattcgac tccaggaagc gctcctcatg
     1921 cacttttagc tatcgggaaa gttgatccaa tgcatcagga tttagcagta gaccctcttg
     1981 gaattctgcg gcctcccact aaattgactc actctctgcc cttggtaagc gcgtactcgt
     2041 catttgcaag aattgggggt ggtcttggtt atgagctgca aaagaggaga gtggatcctg
     2101 ctacaaatga accattattt acgaattgca cacgggattt catcggtacc cttgattaca
     2161 tattctattc agctgacagc ttgagtgtgg aatctttgtt ggagcttttg gatgaggata
     2221 gcttgaggaa agatacagct ctgccttctc ccgaatggtc gtctgatcac atcgcactta
     2281 tggctgaatt tcggtgcaag cctcgaacta ggcgttaaag ctgcatttta ggcaagtaca
     2341 tcacatcatt gcatatagtt tagtgttttg gactcttaga aggttcaaaa aatgtgtggg
     2401 ccgtgtgaca gttcaaagga gggttgtgtc gaaacagtgc ggattgggcc gacctgatat
     2461 actttgtcct aagttaatgt attcctcatg tataacttat tattatctcc gatataattg
     2521 caaagttaat atgtttaact aatatatcag tttcacttgt tttgtttcta agcttgttaa
     2581 taatctaaat gtttaacctg ctagaatcaa atgtaaccca aatcaaccaa ttcttatgca
     2641 aatgagttaa aattgccact tctctaagac taattgatca tgtattccat atctatagca
     2701 aatgggttgg gtcgacatgc aaacacttct aacctattgt ttgggaattt gagtagtaat
     2761 ctatgcgttc tacatgatta caatagttag aaccgtcaac ttattacatt aatagaccaa
     2821 cctcgcatta ggatttaaat ctcttggctt aacccatttg acacatcaac tcagccctgt
     2881 catctgcatt gactcctgca ggtttggtca aaaaagcaaa gtgttgggag atacaagtaa
     2941 agagaaacga atggacaata gctaaaactg taagaactgt agatcgatag ctttcgggat
     3001 gatctactct gtatcatgtt tttataatcc ttgtcctata tacatgccat acttcttttc
     3061 gtttcttctt ttttattaat attaatagaa aaaagataat ttaatcaa
//
LOCUS       XM_071830581            3114 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar protein
            sorting-associated protein 55 homolog (LOC139840313), mRNA.
ACCESSION   XM_071830581
VERSION     XM_071830581.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3114
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3114
                     /gene="LOC139840313"
                     /note="vacuolar protein sorting-associated protein 55
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139840313"
     CDS             2498..2839
                     /gene="LOC139840313"
                     /codon_start=1
                     /product="vacuolar protein sorting-associated protein 55
                     homolog"
                     /protein_id="XP_071686682.1"
                     /db_xref="GeneID:139840313"
                     /translation="MFSSSLLLQLLACVIYSNWWPMLSALMYVLVPMPCMFFGGGSTE
                     YLLSRDGGGWIDAAKFLTGASAVGSIAIPIILKHAHLISTGAMLIEFMSFFIFVGTVM
                     CYHRANLEDEW"
     misc_feature    2531..2833
                     /gene="LOC139840313"
                     /note="Vacuolar protein sorting 55; Region: Vps55;
                     pfam04133"
                     /db_xref="CDD:461188"
ORIGIN      
        1 tcaaccgcga gtcctattat ctcatcattg ctgcaaaacc taactagttt tctcccctca
       61 atcgcacttt tatttcggta ctccgtcacc ttcatcgtgt caattacagc cggagtatca
      121 atttcatcac acacaaaccc taacaatcac accgtactgt tgattcatcg atcatcgttc
      181 gccggacact tttacagaaa tggcgatgac agttgaaggt tagccacttc tattttattt
      241 ctaaaatact cttaattatt aattatagag tcaaattact gtctgttaaa ccttgaattt
      301 ttgttgttca attggaagct actccgtatt tggtcaaccg ttacggttga cttttagggc
      361 taatatataa ttgatcatca attttagctt gttaatatga ttaatataca gtaaaatgta
      421 aattttttat taggtgcatg tgtaagtatc aataaatagt ttgatctcaa aggccaaagc
      481 taacaaaatg catattattg gtacttctta tgcattagat atcactatga tttttagcgt
      541 acacagaaaa ttagaaattg tgactaaatt gtgttttagc tagcacttct atataactca
      601 ctggttattg ttttaaattc aaacaactat ttaaattatt aatacagttt gttgcatggc
      661 aattgatgtg ctactatgat ttgtttgtgt aagagtgatt agatgattcg gtggccttaa
      721 tgttttaatc tgtatctgat ttccgattaa agattgttat aaaatatgtt ttgtgggttg
      781 agaatcagta accggattga tactagaatc gtggtgtcac tttcttaatc gagtatttcg
      841 acccacttgg tcacgggtat cacgaaatca cgattaggat aagactacta tgaacaatcg
      901 tctcgagcaa aagataagtg ttccttgcaa ttatagaaag tatattttgg atgtttgagt
      961 gttgaaagta tgcttagaaa tgtcaaattt ctggaacttt tctacaatga atgaatggtt
     1021 atatttataa tgggtcaaaa ggtgcaatga ggtgttgcaa ccttttaaaa ttagttatga
     1081 ccaaaggaca caagccttgg caatggacat gtttgaaagg gtgcattagt atcctaataa
     1141 agcgttaaac atgtcccaaa acgtccaaat acaagacaac cattagtaaa ccgttgcaaa
     1201 acgcttaggt aaaagttgca acctttttgc agtatcagca gcatggtgcg acgcaccata
     1261 gaattggtgc ggcgcccctc atcactttca cgaaacaccc aaaatcgtcc attggctact
     1321 gatgtcgatt ttgagatttt aagttatatg gtgcggccgt tcggcgcaat agccttttat
     1381 tgcggcgcat cattcttccc tatggtgcgc cgcaacaaat aataggtgtg gcgcacctta
     1441 tgcctggaca tccccttagt ttgttttcca acaacaaact aatactcaac tcaagctatc
     1501 tctttagctc tttggtggac gtacactcca cactccaaat ccgttctaga gcattagaga
     1561 ttgcttcact ttcaacctag caaatccaat acactaaaat gattcattga atcacactaa
     1621 aatcaccaac aaagatttag attctgagcg taattcagat ttttggacat tagagaagat
     1681 cattttctta attaagtagc agattcatgg gagttgtaaa accaataact ttgggcctcg
     1741 aggcaagtaa ttgaaaatga tttcaaatta agtagagaaa caattgttgg cttaaattat
     1801 tctgtttatt gaaattctgt tactatttta tatggatttt caatcgtgat ttctaattga
     1861 caagaaaagg gaatgttgat ttgttggaca cttttctttc ggtgagttgt ttgtatcttc
     1921 tcttcaatac ctacaatgga ggtgtttggg attataactg atttgcttca aagagaacta
     1981 aagaatatca cttgttgaac gcatatttcc caatgaacta ttgagataaa tagttgaata
     2041 aaaaaaacct caaaattggt gtgccaatat actttattca atctcggtaa taatccaata
     2101 tacacacaca accaaaatta aaggattttt ttttactttt tcctctgatt tttactatta
     2161 tagtaatagt aatagtaata tctacgagaa gtgaactcta gttttgggat ggtgtaaaat
     2221 gtacagaaaa ctggaaataa aaatgagcaa taatgtggtt agcggtaata atatattttt
     2281 acactataac tacaacgtat atgtactaca catataatga acatgtactt ttcacactgg
     2341 caggggtatt tattttgttc ttatataggt acttatacgt tcattgtagc catctttact
     2401 atctctaata tttgattttt ctcctttttt ggtgcatgta tttcactgct ctcttggatc
     2461 atgactcacc catgcagtgc ttgctggact tgcccttatg ttttcatcca gccttctttt
     2521 acaactcttg gcttgtgtaa tatacagcaa ctggtggccg atgttatcag cactcatgta
     2581 tgttttggtc ccaatgccat gcatgttttt tggtggaggt tccactgaat atttactcag
     2641 tcgcgatggt ggcggatgga tagatgctgc caagttccta acaggtgcgt ctgcagtagg
     2701 aagtatagcc atccccatca tcttaaagca tgcacatcta atcagcactg gagctatgtt
     2761 gattgaattc atgtcctttt tcatatttgt gggtactgta atgtgttatc atcgtgctaa
     2821 tcttgaagat gaatggtgag gaactttgtc acaaatttca tacttgtaaa agagcgaaga
     2881 agaaagtgaa agaagtatca aaaggtgaaa cacattttta gaaaacatgt ttttgttaat
     2941 gtaaagctaa aaaggttaac ctagtttctt cacttgtgca cattcttgat gtagttaatt
     3001 agtccttcct tttattgttc atgcatatgc atatgcatat gcatacaagt aaacaaggtg
     3061 ttctttttca tgtgaatgat gttatattag tgacactttg tttggttaac ctat
//
LOCUS       XM_071830582            1619 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sorting nexin 1
            (LOC139840314), transcript variant X1, mRNA.
ACCESSION   XM_071830582
VERSION     XM_071830582.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1619
                     /gene="LOC139840314"
                     /note="sorting nexin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139840314"
     CDS             165..1379
                     /gene="LOC139840314"
                     /codon_start=1
                     /product="sorting nexin 1"
                     /protein_id="XP_071686683.1"
                     /db_xref="GeneID:139840314"
                     /translation="MITTQRSPTSGGGLQSPRSPPSQIPFLSVSVTDPAKMGNGVQAY
                     ISYKVITKTNFPEYQGPEKIVIRRYTDFVWLRDRLFEKYKGIFIPPLPEKSTVEKFRF
                     SAEFIEMRRQALHTFVNRIALHHELQQSEDLRTFLQADEQTMERARSQDTGIFKKKPS
                     DLMQIFRDVQSKVSDVVLGKEKPVEETNPEYEKLKRYIFELEDHLAEAQKHAYRLVKR
                     HRELGQSLADFGKAIKLLGACEGDALGTAFSELGAKSEMLSVKLQREAQHILMNFEEP
                     LKDYVRAVQSIKGTIAERANAFRQQCELAEAIKLKEIDLNKLRLIRSEKMLDAEHELG
                     ELKADGEEATRRFETIVRLMNEEIVRFQDQKTQDMGLAFHEFAKGQARLANGIADAWR
                     SLLPKLDSLSVS"
     misc_feature    243..584
                     /gene="LOC139840314"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexins 1 and 2; Region: PX_SNX1_2_like;
                     cd06859"
                     /db_xref="CDD:132769"
     misc_feature    order(366..374,492..494)
                     /gene="LOC139840314"
                     /note="phosphoinositide binding site [chemical binding];
                     other site"
                     /db_xref="CDD:132769"
     misc_feature    720..1352
                     /gene="LOC139840314"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexins; Region: BAR_SNX; cd07596"
                     /db_xref="CDD:153280"
     misc_feature    order(753..755,762..767,774..779,783..788,795..797,
                     804..809,816..818,837..842,846..851,858..860,867..872,
                     879..884,927..929,1239..1241,1248..1253,1257..1265,
                     1272..1274,1281..1286,1290..1298,1302..1307,1314..1319,
                     1323..1328,1335..1340,1344..1349)
                     /gene="LOC139840314"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:153280"
ORIGIN      
        1 catctaaaac ttacaacaga cagcaaacgt tttaccgatc atcttcaacg tcgaatccac
       61 gcatccgtac actataatat catcaaatag atcaaatcct ttcactgtat tatcaaaatt
      121 agggctcaat cgacatcact gaaatctaat tgcagcaata aatcatgatc actacgcaaa
      181 gaagtcctac aagcggtggg ggtttacaaa gccctagatc tcctccttca caaattccgt
      241 ttttgtcagt ttctgttact gatcctgcta aaatggggaa cggtgttcaa gcctatatct
      301 cttataaagt cataactaag acgaacttcc ctgaatatca gggaccagaa aagattgtga
      361 ttcgacggta tacagatttt gtctggttac gcgatcgtct ctttgagaag tacaagggta
      421 tcttcattcc tcctcttcca gagaagagca ctgtagagaa gttcagattc agtgctgagt
      481 ttattgagat gaggcgtcaa gcattgcata catttgtcaa taggattgca ttacatcatg
      541 aacttcagca aagtgaggac cttcgaacct ttttacaggc tgatgaacag acaatggaaa
      601 gagcaaggtc acaagatact ggaatcttta agaagaaacc gtctgatttg atgcagatat
      661 tcagggatgt tcagtctaaa gtgagtgatg tagttcttgg gaaagaaaag ccagtggaag
      721 aaacaaatcc agaatacgag aagctaaaac gatatatatt tgaacttgaa gatcacttag
      781 ctgaagctca gaagcatgcg tatcgtctag ttaagaggca cagagagttg gggcaatctc
      841 tagcagattt tggcaaggca atcaagcttc ttggtgcttg tgaaggagac gctctcggaa
      901 ctgcattttc cgagcttggg gcaaagtcag aaatgctatc agtcaagctt caaagagaag
      961 ctcagcatat tctaatgaac tttgaagaac ctttgaagga ttatgttcgt gctgttcaat
     1021 ccatcaaggg tactatagca gagagggcca atgctttcag gcaacagtgt gaactggcag
     1081 aggcgataaa gctaaaggag atcgatctca acaagttgag gctaattcga tcggagaaga
     1141 tgttagatgc agagcatgaa ctaggggagc taaaagcgga tggtgaggaa gcaacaagaa
     1201 gatttgagac aatagtgcgg ctaatgaatg aagaaatcgt gcgtttccaa gatcaaaaaa
     1261 cacaagatat ggggctggct tttcatgaat ttgcaaaggg ccaagcacgt ttagccaatg
     1321 gtatagctga tgcctggcga agtcttcttc caaaacttga ttctctctct gtctcataac
     1381 actgctttaa acgctatcat gtttaatatc tcaaaatggt attgctcatc tttttttcac
     1441 tcatcggttc tgttttgttt gttttcacat cttaacgtcc atcctattta agatcttctg
     1501 ttgtgtaaca aagaaatgga acatttcata gatttcttta tattttttag aatttctccg
     1561 tttcagtttt gccatgtatc ttctgaatat attccagcat ctacatttga gcaaatttg
//
LOCUS       XM_071830583            1714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sorting nexin 1
            (LOC139840314), transcript variant X2, mRNA.
ACCESSION   XM_071830583
VERSION     XM_071830583.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1714
                     /gene="LOC139840314"
                     /note="sorting nexin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139840314"
     CDS             165..1379
                     /gene="LOC139840314"
                     /codon_start=1
                     /product="sorting nexin 1"
                     /protein_id="XP_071686684.1"
                     /db_xref="GeneID:139840314"
                     /translation="MITTQRSPTSGGGLQSPRSPPSQIPFLSVSVTDPAKMGNGVQAY
                     ISYKVITKTNFPEYQGPEKIVIRRYTDFVWLRDRLFEKYKGIFIPPLPEKSTVEKFRF
                     SAEFIEMRRQALHTFVNRIALHHELQQSEDLRTFLQADEQTMERARSQDTGIFKKKPS
                     DLMQIFRDVQSKVSDVVLGKEKPVEETNPEYEKLKRYIFELEDHLAEAQKHAYRLVKR
                     HRELGQSLADFGKAIKLLGACEGDALGTAFSELGAKSEMLSVKLQREAQHILMNFEEP
                     LKDYVRAVQSIKGTIAERANAFRQQCELAEAIKLKEIDLNKLRLIRSEKMLDAEHELG
                     ELKADGEEATRRFETIVRLMNEEIVRFQDQKTQDMGLAFHEFAKGQARLANGIADAWR
                     SLLPKLDSLSVS"
     misc_feature    243..584
                     /gene="LOC139840314"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexins 1 and 2; Region: PX_SNX1_2_like;
                     cd06859"
                     /db_xref="CDD:132769"
     misc_feature    order(366..374,492..494)
                     /gene="LOC139840314"
                     /note="phosphoinositide binding site [chemical binding];
                     other site"
                     /db_xref="CDD:132769"
     misc_feature    720..1352
                     /gene="LOC139840314"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexins; Region: BAR_SNX; cd07596"
                     /db_xref="CDD:153280"
     misc_feature    order(753..755,762..767,774..779,783..788,795..797,
                     804..809,816..818,837..842,846..851,858..860,867..872,
                     879..884,927..929,1239..1241,1248..1253,1257..1265,
                     1272..1274,1281..1286,1290..1298,1302..1307,1314..1319,
                     1323..1328,1335..1340,1344..1349)
                     /gene="LOC139840314"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:153280"
ORIGIN      
        1 catctaaaac ttacaacaga cagcaaacgt tttaccgatc atcttcaacg tcgaatccac
       61 gcatccgtac actataatat catcaaatag atcaaatcct ttcactgtat tatcaaaatt
      121 agggctcaat cgacatcact gaaatctaat tgcagcaata aatcatgatc actacgcaaa
      181 gaagtcctac aagcggtggg ggtttacaaa gccctagatc tcctccttca caaattccgt
      241 ttttgtcagt ttctgttact gatcctgcta aaatggggaa cggtgttcaa gcctatatct
      301 cttataaagt cataactaag acgaacttcc ctgaatatca gggaccagaa aagattgtga
      361 ttcgacggta tacagatttt gtctggttac gcgatcgtct ctttgagaag tacaagggta
      421 tcttcattcc tcctcttcca gagaagagca ctgtagagaa gttcagattc agtgctgagt
      481 ttattgagat gaggcgtcaa gcattgcata catttgtcaa taggattgca ttacatcatg
      541 aacttcagca aagtgaggac cttcgaacct ttttacaggc tgatgaacag acaatggaaa
      601 gagcaaggtc acaagatact ggaatcttta agaagaaacc gtctgatttg atgcagatat
      661 tcagggatgt tcagtctaaa gtgagtgatg tagttcttgg gaaagaaaag ccagtggaag
      721 aaacaaatcc agaatacgag aagctaaaac gatatatatt tgaacttgaa gatcacttag
      781 ctgaagctca gaagcatgcg tatcgtctag ttaagaggca cagagagttg gggcaatctc
      841 tagcagattt tggcaaggca atcaagcttc ttggtgcttg tgaaggagac gctctcggaa
      901 ctgcattttc cgagcttggg gcaaagtcag aaatgctatc agtcaagctt caaagagaag
      961 ctcagcatat tctaatgaac tttgaagaac ctttgaagga ttatgttcgt gctgttcaat
     1021 ccatcaaggg tactatagca gagagggcca atgctttcag gcaacagtgt gaactggcag
     1081 aggcgataaa gctaaaggag atcgatctca acaagttgag gctaattcga tcggagaaga
     1141 tgttagatgc agagcatgaa ctaggggagc taaaagcgga tggtgaggaa gcaacaagaa
     1201 gatttgagac aatagtgcgg ctaatgaatg aagaaatcgt gcgtttccaa gatcaaaaaa
     1261 cacaagatat ggggctggct tttcatgaat ttgcaaaggg ccaagcacgt ttagccaatg
     1321 gtatagctga tgcctggcga agtcttcttc caaaacttga ttctctctct gtctcataac
     1381 actgctttaa acgctatcat gtttaatatc tcaaaatggt ttgttggggg gtgtttggac
     1441 atgcgttttg aaagtgatca tgtaattttg aatcagtaga agaatcagtc atcaatcaat
     1501 gcaattaatt agttacagtg taataaaaca gtttaaagaa tacggtggat ggtagttgta
     1561 cttgtttttg ttttctgagt tgtaatgaac tggtaatcaa actattcgca gtggcggaac
     1621 ttgaagattt gtaatgggag ggtcacgatc cacgaaatta taaatgtctt tctttaccga
     1681 tagtaaaccc ttaaaatcac acagacgggt gcga
//
LOCUS       XR_011757339            2208 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840315), transcript variant X1, ncRNA.
ACCESSION   XR_011757339
VERSION     XR_011757339.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2208
                     /gene="LOC139840315"
                     /note="uncharacterized LOC139840315; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840315"
     ncRNA           1..2208
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840315"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840315"
ORIGIN      
        1 tataaccgta accacgtcta cgccaatctc actcaccctc cttccccatc tactttgtta
       61 atcatcatca gacctccttt tacaatcgcc ttcaacaatc gacggcaaac aatcgatggt
      121 ttcgcgcggt tataattgtt gtggccgttc gccacggttt taatcaactg tattaggcgt
      181 ttgtagtttt aatcgacaca attagggttt tatttgctgt tttcacattc gcattcatct
      241 gttcagtcaa tcgatgaaag gtgacgtcgc tggtggctgt gatgatcggt gattgaatac
      301 acttttgtaa atcttgtttc cgggcgatca gtggctccgg gcggtcagtg gctcctctca
      361 agagtgcttt tgttgcacgt gtcgggcgta gtaaggccaa gtcctagagt tgactttcgt
      421 tgtgtgtcaa cttgataaaa tttctggtaa gtttcaacat gtaattaagg attcacagca
      481 agtttattca tatttgattt ttggactatt tcatttgatt atgttgatgc atacaatgat
      541 taatcatatt agagctgttt agttgagttg tttacatgtt aaattttgat tgttagttga
      601 gttgtggatg acagtgttga catacaatct tcactagatg ggtttatgac atgttctgtt
      661 acagggtcac atatcatatg ctcaaaaata tgtaagtatg ttacagaagt agaaagatgc
      721 aagaattccc atataatatc tttttgacaa aacatttctt catgaagaac tggtttaatc
      781 tttagttttt agtggtaaca aaatggccgg gtcgggctgt atgggacaaa tttagttaaa
      841 aagtatcaat tacccgttct ttacttaagg ctttaaagtt gttaccctta aatagattta
      901 aaaattagaa ttattttggc gaagaatcgt acatcataat tatattaaca agatctttgc
      961 ctgtgaaaat tatgagaaaa gtattactag caaaggaaaa aaagggttat atcatttaat
     1021 gctacgggct cagtcatata ttaggctcat taataacatg ttttggtatg tgacgaattg
     1081 tgtattggag agtagtggct gaattggagg catgacttga catgctttgg ttcggttgaa
     1141 tagttttgga cggtagaaac aggcatcaat ggatagcagc ggcaaagatc aagctttttt
     1201 atatattgcc actgcaactg cgaaggatgt taatggacgt tttatataca ctcaatggtt
     1261 tcggttcatt tataactata agtatcagta tgacagtatc atgcctaata tgtttccttt
     1321 ttagtaatta ctgagattaa gattgtgtat gctatattaa catgttactg agtatgattt
     1381 ttttttccag actttacttt gttacatgct cttcttggtt tgtgaagttt gttgctaatc
     1441 atatttagta cccacgttca catataagca gctcaagaaa cacatctaga tctttttcaa
     1501 gtttgttgct aatcatattc atgcaattgc gtgacgttca ctgaaaaagt tttctcgggc
     1561 ataccttgtt atagttagtg ttttggtttt tgtaaaagac tttttagaaa aatatcgatt
     1621 tgtatcactc catatttatg ttatttttct attacgaatg attattcatt cgaacacatt
     1681 ttgtttacat tttttgaggt ttggttatat ggcagatgta attgtctata ttctacattt
     1741 gtttctttat gtgctatgaa ttatgatata ctgatttttc tatatactgg tggcaactga
     1801 gaagttttct ctgttgagta gaaagctgga agttattcag tgctcttcat gatgttgggt
     1861 cttctcagga ctaccattcg atcaataatt ttcattcttt ttatgcttat aaatatattt
     1921 atttttctat tggtttaatg tatttaaaaa taacagttaa tgagtaatgt ggtacaacat
     1981 caatgataca gggtgccttg gatggtgaac tagaatttcc ttagagtgag aagaggttag
     2041 atggttaaag caaaatggta agagccttga tttgaaggtc accgcaagta catctatggt
     2101 ggtcacatat atgttaggta aatttgtata ttttttcaaa tccaaaaact tgatttatat
     2161 caactcattt ttaacgtccg tttgatattt gtcgatttat tgttcaca
//
LOCUS       XR_011757340            2436 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840315), transcript variant X2, ncRNA.
ACCESSION   XR_011757340
VERSION     XR_011757340.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2436
                     /gene="LOC139840315"
                     /note="uncharacterized LOC139840315; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840315"
     ncRNA           1..2436
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840315"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840315"
ORIGIN      
        1 tataaccgta accacgtcta cgccaatctc actcaccctc cttccccatc tactttgtta
       61 atcatcatca gacctccttt tacaatcgcc ttcaacaatc gacggcaaac aatcgatggt
      121 ttcgcgcggt tataattgtt gtggccgttc gccacggttt taatcaactg tattaggcgt
      181 ttgtagtttt aatcgacaca attagggttt tatttgctgt tttcacattc gcattcatct
      241 gttcagtcaa tcgatgaaag gtgacgtcgc tggtggctgt gatgatcggt gattgaatac
      301 acttttgtaa atcttgtttc cgggcgatca gtggctccgg gcggtcagtg gctcctctca
      361 agagtgcttt tgttgcacgt gtcgggcgta gtaaggccaa gtcctagagt tgactttcgt
      421 tgtgtgtcaa cttgataaaa tttctggtaa gtttcaacat gtaattaagg attcacagca
      481 agtttattca tatttgattt ttggactatt tcatttgatt atgttgatgc atacaatgat
      541 taatcatatt agagctgttt agttgagttg tttacatgtt aaattttgat tgttagttga
      601 gttgtggatg acagtgttga catacaatct tcactagatg ggtttatgac atgttctgtt
      661 acagggtcac atatcatatg ctcaaaaata tgtaagtatg ttacagaagt agaaagatgc
      721 aagaattccc atataatatc tttttgacaa aacatttctt catgaagaac tggtttaatc
      781 tttagttttt agtggtaaca aaatggccgg gtcgggctgt atgggacaaa tttagttaaa
      841 aagtatcaat tacccgttct ttacttaagg ctttaaagtt gttaccctta aatagattta
      901 aaaattagaa ttattttggc gaagaatcgt acatcataat tatattaaca agatctttgc
      961 ctgtgaaaat tatgagaaaa gtattactag caaaggaaaa aaagggttat atcatttaat
     1021 gctacgggct cagtcatata ttaggctcat taataacatg ttttggtatg tgacgaattg
     1081 tgtattggag agtagtggct gaattggagg catgacttga catgctttgg ttcggttgaa
     1141 tagttttgga cggtagaaac aggcatcaat ggatagcagc ggcaaagatc aagctttttt
     1201 atatattgcc actgcaactg cgaaggatgt taatggacgt tttatataca ctcaatggtt
     1261 tcggttcatt tataactata agtatcagta tgacagtatc atgcctaata tgtttccttt
     1321 ttagtaatta ctgagattaa gattgtgtat gctatattaa catgttactg agtatgattt
     1381 ttttttccag actttacttt gttacatgct cttcttggtt tgtgaagttt gttgctaatc
     1441 atatttagta cccacgttca catataagca gctcaagaaa cacatctaga tctttttcaa
     1501 gtttgttgct aatcatattc atgcaattgc gtgacgttca ctgaaaaagt tttctcgggc
     1561 ataccttgtt atagttagtg ttttggtttt tgtaaaagac tttttagaaa aatatcgatt
     1621 tgtatcactc catatttatg ttatttttct attacgaatg attattcatt cgaacacatt
     1681 ttgtttacat tttttgaggt ttggttatat ggcagatgta attgtctata ttctacattt
     1741 gtttctttat gtgctatgaa ttatgatata ctgatttttc tatatactgg tggcaactga
     1801 gaagttttct ctgttgagta gaaagctgga agttattcag tgctcttcat gatgttgggt
     1861 cttctcagga ctaccattcg atcaataatt ttcattcttt ttatgcttat aaatatattt
     1921 atttttctat tggtttaatg tatttaaaaa taacagttaa tgagtaatgt ggtacaacat
     1981 caatgataca gggtgccttg gatggtgaac tagaatttcc ttagagtgag aagaggttag
     2041 atggttaaag caaaatggta agagccttga tttgaaggtc accgcaagta catctatggt
     2101 ggtcacatat atgttagata cgaatctatc gcaaaggctt acttcgagtg tctagtacca
     2161 gatgtatatg gtgaccagat ctacaagcag gttgatgcgg ccccaaggga atcatatctg
     2221 caggtagatt tattacggcc cgaaatcaaa ggtaaaatac ttatttccta cgggactcga
     2281 acttgcgcca acttctcaaa ggcttccgct catggagctg tgattttaaa ggtaacgaag
     2341 actagttgaa ctattgctta ctcgtaataa ttacgaagaa ttagttttac agtagtattt
     2401 acacgtgcaa tatttttttt taatgtttag aatttg
//
LOCUS       XR_011757341            1073 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840316), ncRNA.
ACCESSION   XR_011757341
VERSION     XR_011757341.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1073
                     /gene="LOC139840316"
                     /note="uncharacterized LOC139840316; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840316"
     ncRNA           1..1073
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840316"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840316"
ORIGIN      
        1 attatgttca ttcgtcagat taatttacct ctccatcaca accctaaatc cggcgataat
       61 ggactacgtc tgccgtaata caggtcgccg ctaccaccaa attatctgcc acaattttag
      121 tcacctgatg gtataacttt tgtttggtat ctccgtacac ttcttctcca tcaaattcgt
      181 ttaaacccga ttagggttcc atatgaacgg ttaaattcac caaaaaatca caactcattc
      241 aatcgatagt tttctgtctg cttctcacta tcggttatcg gtggtcaaac aaatcgtaat
      301 tgttgttgtt catcgccatt gttactgcgc cagtactgca gtggttaagg gtatttcgtt
      361 tctgcaacat cacggggtta gtggcgactg tctccgattg cagcttcttc gtttgctgcg
      421 atatgcataa aatgttaggg tttcaatctc ttatccgatg tgatgatata tacaatcgtc
      481 ttttttgagc ggcataaatt ggttctaaaa tgtcttcttg gcatctctgc tttggcgttg
      541 gcgatgaacg acgatttagc gatttgggtc actatggttg tcatagctgc catctcatag
      601 tttttctcgg acgaggagtg cttaacatca tactttcgaa atcgtcgtgt ttattatcat
      661 aagtgttgtg aagatgggcg tgttgtgttg ccttcatatg gcgaccctct ggaaatggtc
      721 aaaggtttgt tgcaacaaag gagtttcatg gataacatac gcgctcacaa gcaaataagc
      781 attttattca catatacacc attaacgtct ctaaaaagaa aaaaagattg tcagccgact
      841 gcagcaatag aagcttaaac tttaaggaga agaaacaaca tcttttgtgc ccaggtcttc
      901 tatcaaccag ctgtagtaat agatacttta gcccttgata tatgtaaata taggacaaac
      961 ttttgttaga taactccaat aaagatttaa gtagatacgt tagcccctta tatgtaaatg
     1021 taggacagac ttttgttaca taactgtatt aatgatctta gtactataac aca
//
LOCUS       XM_071830584            1837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/LRR-repeat protein
            At3g26922-like (LOC139840317), transcript variant X1, mRNA.
ACCESSION   XM_071830584
VERSION     XM_071830584.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1837
                     /gene="LOC139840317"
                     /note="F-box/LRR-repeat protein At3g26922-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840317"
     CDS             261..1493
                     /gene="LOC139840317"
                     /codon_start=1
                     /product="F-box/LRR-repeat protein At3g26922-like"
                     /protein_id="XP_071686685.1"
                     /db_xref="GeneID:139840317"
                     /translation="MDLVHHTTSDGAAEDRIFDLPDDIIYRILSFLDMKYAVQTSLLS
                     RRWKHAWKSMPNVILSNHNYNSRKMFANFVHEALSRRDNQTEVSALDLNISGDTEQSF
                     VKPIVKYAYLHNVTKLTMIWCSDYYSELPRVLFSSPTLKHLTLGNRSQRRVKFWKHQT
                     LLSKSSWYFPDSWELPALETLNLSNLCFDFLGNKNVNMFSKCKNLKDLVLHRLEYRPL
                     ETFNVCAPQLINLTITDFNSFPKVFNVVAPQLKNMTASVTSYFSLGRPTVLPLFTEGF
                     NYLEKVSLSFGSGDKEKTHGSQILDLFPIFCNAKLLILDVNIIERLSMCMDRIIHERG
                     PFINLKCLKINTMPHEQYEPIATILVQVNNYLLHNSLSATTSIGDFPQVPQKRSRQQL
                     LTELLIRLLEICNHRLCF"
     misc_feature    309..416
                     /gene="LOC139840317"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; Region: F-box_AtFBL13-like; cd22160"
                     /db_xref="CDD:438931"
     misc_feature    order(318..320,330..332,339..344,351..356,366..368,
                     372..377,387..395,399..401)
                     /gene="LOC139840317"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438931"
     misc_feature    792..872
                     /gene="LOC139840317"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    873..941
                     /gene="LOC139840317"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    942..1007
                     /gene="LOC139840317"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    1095..1184
                     /gene="LOC139840317"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    1185..1274
                     /gene="LOC139840317"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
ORIGIN      
        1 tattcttctt ccacatatat tacctccata aaaacactgt ttagctcaat tcttcttctt
       61 cttcttcttc atttttcgct actctctgta gctgcaaccc agaaaaacaa ctacaaaaat
      121 taaattagga caagtcgcaa taaattcttc ttcttcttct tcttcatatt ctccctactc
      181 actgtagctc aaggttgaaa aatatcaaga aatcatcttc gcatcaaacg aatccgtaac
      241 atcgtgttca aagcccaaca atggatttgg tacaccatac cacaagtgat ggtgccgcag
      301 aggatagaat cttcgactta ccagatgaca tcatttatcg cattctatct ttccttgaca
      361 tgaaatacgc ggttcagact agtttattat ctcggagatg gaagcatgca tggaaatcaa
      421 tgcccaatgt tatcttgagt aatcacaatt acaatagcag aaaaatgttt gccaactttg
      481 tgcacgaggc attatctcgc cgcgacaatc aaacggaagt ttctgcactt gatctcaata
      541 tctcaggaga caccgaacag tcgtttgtta aacctattgt aaaatacgcg tacttgcata
      601 atgttacaaa actgactatg atatggtgta gtgattatta tagtgagctc ccacgtgttc
      661 ttttcagttc tccaacactt aaacatctca cacttggtaa tcgatctcag cgtcgcgtga
      721 agttctggaa gcatcaaaca ttattgtcaa agtcatcttg gtattttccg gattcttggg
      781 aattaccggc tctagaaact ttgaatttga gtaatttgtg tttcgatttt cttggaaata
      841 aaaatgtcaa tatgttttcc aaatgcaaaa acttaaagga tctcgttttg catcgactcg
      901 agtacaggcc gttggagacg ttcaacgttt gcgctccaca actgattaat ctcacaatta
      961 cggattttaa ctcttttcca aaggttttta acgtggttgc tcctcaactt aagaatatga
     1021 ctgcatcagt tacctcatat ttttcgttgg gtagacctac ggttctaccg ttgtttacag
     1081 agggttttaa ttatctagag aaagttagcc tctcttttgg aagtggtgac aaagagaaga
     1141 cacatggttc ccagatactt gatttattcc ctatattttg caatgctaaa cttctaatcc
     1201 ttgatgtgaa catcattgag aggctctcaa tgtgcatgga tcgaatcata catgaacgtg
     1261 gcccgttcat taatttgaag tgtttgaaga taaatacgat gccgcacgag caatatgagc
     1321 ctatagcaac aattcttgtt caagtaaata actacttgct tcacaactct ctaagtgcta
     1381 caacttccat cggcgatttt ccccaggtgc cacagaagag atcaaggcag cagctactaa
     1441 cagaattgct aataaggttg ctggaaatat gcaaccacag actatgcttt tagaaaaaaa
     1501 ggatgttaga agcaaaaata caaatgcaag atcaacctat ttgcacgaat gaatgcagat
     1561 ctacaagtgc aaaatcaagt tattgtatag cagcagcagg caaaaataca aatgcaagat
     1621 caactatttc ctcttgactg tgtcgtccga agtttaatgt aaatgttttt gttgaagttt
     1681 ctgactatca atgcttttgt ttaatgtgta gtcttgattg atttggtgta tataggactt
     1741 atgttgatct aatgattgta gttccatcgt aattttcatg tacatttcgt gttctagatc
     1801 agaacatggg tgtgtaaaag ctcagcataa aattcaa
//
LOCUS       XR_011757342            1604 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/LRR-repeat protein
            At3g26922-like (LOC139840317), transcript variant X2, misc_RNA.
ACCESSION   XR_011757342
VERSION     XR_011757342.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1604
                     /gene="LOC139840317"
                     /note="F-box/LRR-repeat protein At3g26922-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840317"
     misc_RNA        1..1604
                     /gene="LOC139840317"
                     /product="F-box/LRR-repeat protein At3g26922-like,
                     transcript variant X2"
                     /db_xref="GeneID:139840317"
ORIGIN      
        1 tttattcttc ttccacatat attacctcca taaaaacact gtttagctca attcttcttc
       61 ttcttcttct tcatttttcg ctactctctg tagctgcaac ccagaaaaac aactacaaaa
      121 attaaattag gacaagtcgc aataaattct tcttcttctt cttcttcata ttctccctac
      181 tcactgtagc tcaaggttga aaaatatcaa gaaatcatct tcgcatcaaa cgaatccgta
      241 acatcgtgtt caaagcccaa caatggattt ggtacaccat accacaagtg atggtgccgc
      301 agaggataga atcttcgact taccagatga catcatttat cgcattctat ctttccttga
      361 catgaaatac gcggttcaga ctagtttatt atctcggaga tggaagcatg catggaaatc
      421 aatgcccaat gttatcttga gtaatcacaa ttacaatagc agaaaaatgt ttgccaactt
      481 tgtgcacgag gcattatctc gccgcgacaa tcaaacggaa gtttctgcac ttgatctcaa
      541 tatctcagga gacaccgaac agtcgtttgt taaacctatt gtaaaatacg cgtacttgca
      601 taatgttaca aaactgacta tgatatggtg tagtgattat tatagtgagc tcccacgtgt
      661 tcttttcagt tctccaacac ttaaacatct cacacttggt aatcgatctc agcgtcgcgt
      721 gaagttctgg aagcatcaaa cattattgtc aaagtcatct tggtattttc cggattcttg
      781 ggaattaccg gctctagaaa ctttgaattt gagtaatttg tgtttcgatt ttcttggaaa
      841 taaaaatgtc aatatgtttt ccaaatgcaa aaacttaaag gatctcgttt tgcatcgact
      901 cgagtacagg ccgttggaga cgttcaacgt ttgcgctcca caactgatta atctcacaat
      961 tacggatttt aactcttttc caaaggtttt taacgtggtt gctcctcaac ttaagaatat
     1021 gactgcatca gttacctcat atttttcgtt gggtagacct acggttctac cgttgtttac
     1081 agagggtttt aattatctag agaaagttag cctctctttt ggaagtggtg acaaagagaa
     1141 gacacatggt tcccagatac ttgatttatt ccctatattt tgcaatgcta aacttctaat
     1201 ccttgatgtg aacatcattg agaggctctc aatgtgcatg gatcgaatca tacatgaacg
     1261 tggcccgttc attaatttga agtgtttgaa gataaatacg atgccgcacg agcaatatga
     1321 gcctatagca acaattcttg ttcaagtaaa taactacttg cttcacaact ctctaagtgc
     1381 tacaacttcc atcggcgatt ttccccagac tcatatttct atcatttttc gatagttcca
     1441 ctgctctaat gtacttccat gaatctttat gctctatcta atgccacgtg cccacgttgt
     1501 gccacagaag agatcaaggc agcagctact aacagaattg ctaataaggt tgctggaaat
     1561 atgcaaccac agactatgct tttagaaaaa aaggatgtta gaag
//
LOCUS       XM_071830585            1488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840318), mRNA.
ACCESSION   XM_071830585
VERSION     XM_071830585.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1488
                     /gene="LOC139840318"
                     /note="uncharacterized LOC139840318; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840318"
     CDS             170..1315
                     /gene="LOC139840318"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686686.1"
                     /db_xref="GeneID:139840318"
                     /translation="MNTMRIGSNHETVYNLKTRDFGAQQHQQPWQAGIILPSDIVNHQ
                     EQLDHQQQMINYSRKETPSCSKTIMEQIGSPSSALWATERYLGFSQNGVTRSFNEDND
                     VSSVPQMRFDQFIPSNENGYFSSYDRSQRMRCGSVSEKDKLRELKRKLLEETEFSDWR
                     QSKSTICYDGKQDLGAQYGESRQVTRPSSGQLLVNCENTGNVVPSKTRIRWTQDLHDR
                     FVECVTLLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYLPESTKGNSEKRT
                     TTDTISQIENITGMQFKDALQMQLAVQRQLHEQLEIQRNLQLRIEEQAKQLKKMFDQH
                     QQQKANKSEISEMTSSHDDHLSTNFDGDEILNIEDDSEDTIFPSKIS"
     misc_feature    785..955
                     /gene="LOC139840318"
                     /note="myb-like DNA-binding domain, SHAQKYF class; Region:
                     myb_SHAQKYF; TIGR01557"
                     /db_xref="CDD:130620"
     misc_feature    1040..1177
                     /gene="LOC139840318"
                     /note="MYB-CC type transfactor, LHEQLE motif; Region:
                     Myb_CC_LHEQLE; pfam14379"
                     /db_xref="CDD:464160"
ORIGIN      
        1 aataaaaaaa ataaaaaatt tctagcaaac ccataattgg tttcttctaa attttatttt
       61 cttgatattc ttcgtactct tttcactaat cttgatcgat ttcatgaagt tttcgtgcta
      121 aacgctacaa attttgaccc aaaaaactct ttatttttgt actgaaagaa tgaatactat
      181 gaggattggt tctaaccatg aaacagttta caatcttaaa actagagatt ttggtgcaca
      241 acaacatcaa caaccatggc aagctggaat tattttaccc tccgatatcg ttaaccatca
      301 agaacaacta gatcatcaac aacagatgat aaattatagt agaaaagaaa caccatcttg
      361 tagtaaaacg atcatggaac aaatcggttc accatcttct gcactttggg caactgaaag
      421 atacttgggc ttttcacaaa acggcgttac tagatctttt aacgaagata acgatgtttc
      481 atctgtaccc cagatgagat ttgatcaatt tataccatct aatgaaaatg gatactttag
      541 ttcttatgat agatcacaaa gaatgagatg tgggagtgta tctgaaaagg ataaacttag
      601 ggagctaaaa cgaaaattac ttgaagaaac tgaattttcg gattggagac aatcaaaatc
      661 cactatttgt tatgatggaa aacaagatct tggtgcgcaa tatggggaat ctagacaagt
      721 gactcgaccc tcttcgggtc aacttttggt caactgtgaa aatactggaa acgttgttcc
      781 aagtaaaacg cgaataagat ggactcaaga tctccatgat cgatttgtag agtgtgtgac
      841 tctcttaggt ggtgctgaaa aggcgacgcc aaaggcaata ctgaagttaa tggactcgga
      901 agggttgaca atctttcatg tgaaaagtca tttgcagaaa tacaggatag ccaagtactt
      961 acctgaatct actaaaggaa attctgaaaa gagaactact acggatacca tatcgcagat
     1021 tgaaaatata actgggatgc aatttaagga tgcactgcaa atgcaacttg ctgtacagag
     1081 gcaacttcat gagcaacttg agatacaaag aaacttacag ttgagaatag aagaacaagc
     1141 aaaacagcta aagaagatgt ttgatcagca tcaacaacaa aaagctaata aatccgagat
     1201 ttcagaaatg acatcttcac acgatgatca tctgtctaca aattttgatg gtgatgagat
     1261 tttaaatatc gaagatgatt ctgaagatac catttttcca tccaaaataa gttagatttc
     1321 cttcaagaca cttcagattt ttagaaatct tgcagatgat caagacaaca gcattttgtg
     1381 aatcaatttt gaaatcatga atgtaaagcc cggtttatac ttgatagcta tactgttatc
     1441 tcgtgtacaa ataaaatccg ataataaata aaaatattga aatttact
//
LOCUS       XM_071830586            1314 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative zinc finger protein
            At1g68190 (LOC139840319), mRNA.
ACCESSION   XM_071830586
VERSION     XM_071830586.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1314
                     /gene="LOC139840319"
                     /note="putative zinc finger protein At1g68190; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840319"
     CDS             5..1105
                     /gene="LOC139840319"
                     /codon_start=1
                     /product="putative zinc finger protein At1g68190"
                     /protein_id="XP_071686687.1"
                     /db_xref="GeneID:139840319"
                     /translation="MMDRYCEFCVNLRSVVFCKADAAYLCLSCDNKVHSANPLSNRHY
                     RTLICDICRRRPIYIHCYDHHKFMCRACNLNQHNVSSQRRKRFVNSYMGCPTACDLGV
                     LWGIDLNKFVDGSICLNHKVDSASSPSTTPCFTDIKEVNVVQQLVDLLKIQTCDVDRS
                     SSIIRCQEQKVDNVDDQFSLYLDHYDMCLESCSSSFSKMDHLESETDLQGDTYWQCKS
                     PILSNQHWSQNMQDLGVCEQEPSCLDDLNMPDIDLTFKNFEELFRIDHESTRVDPVIA
                     MKDTSITNRLTNNSQSSPKKARYTSQIIDESIGTICNHDAIISLSCGSNEHISKDTKP
                     CQFGYRKARSNTRKRTKSQSWKFENYESVTRI"
     misc_feature    20..148
                     /gene="LOC139840319"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; Region: Bbox1_BBX-like; cd19821"
                     /db_xref="CDD:380879"
ORIGIN      
        1 atttatgatg gatagatatt gtgaattctg tgtgaattta agatcagttg ttttctgtaa
       61 agcagacgca gcctatctct gtctttcatg tgataataag gttcactcag ccaatcctct
      121 ctcgaatcgc cattatagaa ccctcatttg tgacatttgc agacgacgtc cgatttatat
      181 ccattgttat gatcatcaca agtttatgtg tcgcgcttgt aaccttaatc aacataatgt
      241 ttcttctcaa cgtagaaaaa gatttgtaaa tagttacatg ggctgcccga cagcctgcga
      301 tttaggggta ttatggggaa ttgacttaaa taagtttgtt gatggtagta tctgtcttaa
      361 ccataaagtt gattcagctt caagtccctc aacaacccca tgtttcaccg atattaagga
      421 agttaatgtt gttcaacaac ttgttgattt gttaaagatc caaacatgtg atgttgatcg
      481 tagctcatct ataattcgtt gccaagaaca aaaagtggat aatgtagatg atcaattttc
      541 tctctatctt gatcactatg acatgtgtct agaatcatgt tcgtcgtcat tctcaaaaat
      601 ggatcactta gaatctgaaa ccgacctcca aggtgacacg tattggcaat gcaaaagtcc
      661 gattctaagc aaccagcatt ggtctcaaaa tatgcaagat cttggtgtat gtgaacaaga
      721 accgtcttgc ttggatgatt taaacatgcc tgatatcgat ctcactttca aaaatttcga
      781 agaactgttt cgaatcgacc atgagtctac tagagttgat ccagtaatag ccatgaagga
      841 tacgtctata actaatcgtc taacaaataa ctctcaatca tctccaaaga aagcacgtta
      901 tacttcacaa atcattgatg aaagcattgg tacaatatgc aatcacgatg caatcatttc
      961 actctcgtgt ggatcaaatg agcatatttc aaaggataca aaaccatgcc agttcggtta
     1021 cagaaaggct cgatcaaaca caagaaaaag aacaaaatct caaagttgga agtttgagaa
     1081 ctatgaatca gtgacaagaa tctaatactc aagtttctac gttatattgt atttttaaag
     1141 ataaatgtca caaagttaca accggtgaaa attaaactta agtcttcatt ataaattctc
     1201 aagcctccaa tcaccatatt gcccctcaag gttgttatat tgtttgttgt aggttgatct
     1261 taaggtacac caagaacatg gtctaattat attatatgac aaagacgaat cact
//
LOCUS       XM_071830587            1454 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides acetylglutamate kinase,
            chloroplastic (LOC139840320), mRNA.
ACCESSION   XM_071830587
VERSION     XM_071830587.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1454
                     /gene="LOC139840320"
                     /note="acetylglutamate kinase, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840320"
     CDS             227..1237
                     /gene="LOC139840320"
                     /codon_start=1
                     /product="acetylglutamate kinase, chloroplastic"
                     /protein_id="XP_071686688.1"
                     /db_xref="GeneID:139840320"
                     /translation="MLAAKTLISRPSVLQTPTFPNPSIKSSQKPLRFTSIRLKSSAQT
                     VLTETLSTTPAKTRVKILSEALPFIQKFRGKTVVVKYGGAAMKSEALQASVITDLVLL
                     SCIGLRIVFVHGGGPEINQWLNRLGIQPNFLNGLRVTDASTMEIVSMVLVGKVNKHLV
                     GLINKAGATAVGLCGTDGRIFTAIPSPNAAELGFVGEISSVDTSVLRPLINDNLIPVI
                     ASVAADGTGQSYNINADTAAGALAAALGAEKLLLLTDVAGILEDKNDPESLVKEIDVK
                     GVKKMMEDGKIAGGMIPKVNCCVKSLSQGVKTASIIDGRLEHSLLLEVLTDEGAGTMI
                     TG"
     misc_feature    311..1234
                     /gene="LOC139840320"
                     /note="acetylglutamate kinase; Region: PLN02512"
                     /db_xref="CDD:178128"
     misc_feature    407..436
                     /gene="LOC139840320"
                     /note="feedback inhibition sensing region [active]"
                     /db_xref="CDD:239783"
     misc_feature    order(410..418,422..424,431..436,515..517,527..529,
                     539..541,599..604,659..661,668..673,686..688,695..697,
                     707..709,728..730,734..742,746..748,752..763,839..841,
                     866..868,1178..1180,1187..1192,1202..1204)
                     /gene="LOC139840320"
                     /note="homohexameric interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239783"
     misc_feature    order(464..466,473..478,923..925,986..994,1004..1006,
                     1082..1084,1088..1090,1094..1099,1106..1108)
                     /gene="LOC139840320"
                     /note="nucleotide binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:239783"
     misc_feature    order(566..571,632..637,917..919,923..928)
                     /gene="LOC139840320"
                     /note="N-acetyl-L-glutamate binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:239783"
ORIGIN      
        1 aaaaatagcc ctaaaataat aaacagctgt gaccttcatc gactctttcg tccttcgaaa
       61 ccttcgatca ttttatctat atatagtaac ctgcatttca gcaaataagc atcgtaagtt
      121 actgttgtgg cgcaattgta ataattctgt agctgttaca tacctgctta taatccaatt
      181 tgaaaccgat tgtgacctgt aacttcacat attgactagt gaaatcatgt tggctgcaaa
      241 aaccctaatt tcacgtcctt ctgttctcca aacaccaaca ttcccaaacc ctagcatcaa
      301 atcatcacaa aaaccattga gattcacatc catacgtctg aaatcatctg cacaaactgt
      361 tctaacagaa acactatcaa caacccccgc aaaaactcgc gtcaaaatcc tctcagaagc
      421 cctaccgttc atccagaagt ttcgcggtaa aaccgttgtc gttaaatacg gtggtgcagc
      481 aatgaaatca gaagctctgc aagcatctgt cattacagat ctcgttttgc tctcttgtat
      541 tggtcttcga atcgtgtttg ttcacggtgg tggccctgaa attaaccagt ggttaaatcg
      601 gttaggtatt cagcctaatt ttcttaacgg attaagagta acagacgctt cgactatgga
      661 gattgtttca atggttttag tcggtaaggt taataaacat ttagttggat tgattaataa
      721 agctggtgca actgcagttg gattgtgtgg gacagatgga aggattttta cagcgattcc
      781 ttctccaaat gcagctgaat tagggtttgt tggagagatt tcgagtgttg atacgtcggt
      841 tttacggcct ttgattaatg ataatttgat tccggtgatt gcgtcagtgg cagctgatgg
      901 gacagggcaa tcgtataata ttaacgcgga tacggcggca ggggcgttgg cggccgcgtt
      961 aggcgctgaa aagttgttgt tgttgaccga tgtggcggga attttagagg ataagaatga
     1021 tccggaaagt ttagtgaagg aaattgatgt gaaaggggtt aaaaaaatga tggaagatgg
     1081 gaaaattgct ggtgggatga ttccgaaagt gaattgttgt gtgaaatcgt tgtctcaggg
     1141 ggttaaaact gcgagtatta tcgatgggcg gttggaacat tcgttgcttc ttgaagttct
     1201 tactgatgaa ggtgctggaa ctatgatcac ggggtaagat atcgttttat ttttggcttg
     1261 tattttatat tcctttcttt ttgtttggag ttatgaaatt agttttgtat ggtgctgttt
     1321 gaagcctcgt ttaagtcatt tttgttttct cggtatctaa ttgttgaaaa gaagttgaaa
     1381 acaatatgag tagcttataa aaccggctat gtgttaagct atgaagtgtt gtgacagtat
     1441 ggaaagctaa taaa
//
LOCUS       XM_071830588            1638 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At1g57790-like (LOC139840322), mRNA.
ACCESSION   XM_071830588
VERSION     XM_071830588.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1638
                     /gene="LOC139840322"
                     /note="F-box/kelch-repeat protein At1g57790-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840322"
     CDS             215..1354
                     /gene="LOC139840322"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At1g57790-like"
                     /protein_id="XP_071686689.1"
                     /db_xref="GeneID:139840322"
                     /translation="MAGRKRKRLKLLTATYKDDTKLSTSGNKEQEEEEAWSFLPVELL
                     EFIISQLTLRDNIRTSAVCKRWLSVALSVRVVNKPPWLMYFPKLGHRFEFYDPSQRKT
                     YSLELPELHGCRICYNKDGWLLLYKPRTQRVLFFNPFTREMIKLPRFEMTYQIVAFST
                     SPKFPDCIVFTVKHVSPTVVAISTCHPGATVWTTVNYHNRLPFVSSIWNKLVFCNGLF
                     YCLSLTGWLGVYDPHELTWTIRIVPPPRCPDNFFVKNWWKGKFMAEHKGDIFVIYTCY
                     SENPIIYKLDQANKEWVEMKTLEGVTLFASFLSSHARTDLSGMMRNSVYFSKVRFYGK
                     RCISYSLDHQRYYPRKQCHDWGEQDPFESIWVEPPEDISTFNWED"
     misc_feature    323..424
                     /gene="LOC139840322"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cd09917"
                     /db_xref="CDD:438852"
     misc_feature    order(329..334,338..346,353..358,365..367,398..406,
                     410..412,419..421)
                     /gene="LOC139840322"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438852"
     misc_feature    order(329..331,341..343,350..355,362..367,377..379,
                     383..388,398..406,410..412)
                     /gene="LOC139840322"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438852"
ORIGIN      
        1 tggttgccac acatacttac actgtaccgc atcatatctg atcccagctc cctcttattt
       61 tacacgtgtt atactaatac acattcacgt tgtgacaacc gtctttctca atatcattat
      121 ttctatctct cacacacata gtgagacacc gcaataatac acacagttat acatacagtg
      181 ctgttgtgag agaaagctta aattgatcgt gattatggca ggaaggaaga gaaagagact
      241 taaattgtta acagcaacgt acaaggatga tacaaaactt tcaacgagcg gaaataagga
      301 gcaggaagaa gaagaggcgt ggtctttcct tccagtcgaa ctccttgaat ttataatatc
      361 acaattaacg ttaagggaca acattcgcac ttctgcagta tgcaaaagat ggttgtcagt
      421 agctttatca gtcagagtgg tcaacaagcc accatggctt atgtacttcc caaaacttgg
      481 tcaccgtttc gagttttatg acccttcaca acgcaaaaca tactctcttg aattacccga
      541 gttacatggt tgcaggattt gttataataa agacggttgg ttgttgcttt acaaaccaag
      601 aacccaacgg gtcctattct ttaacccatt tacccgagaa atgattaaat tgccaaggtt
      661 tgagatgact tatcaaattg tggcgttttc gacatcccct aagtttcccg actgcattgt
      721 ttttacagtt aagcatgtta gtcctactgt tgttgctatc agcacttgtc atccaggagc
      781 aacagtttgg actacagtta actaccataa ccgattaccg tttgtaagca gtatttggaa
      841 taaacttgtt ttttgcaatg gattgttcta ttgtttaagc ctaaccggat ggctgggggt
      901 ttatgacccg catgagctga cttggactat ccgtattgtc cctccaccca ggtgtcctga
      961 taatttcttc gttaaaaatt ggtggaaagg gaagtttatg gctgagcata aaggtgatat
     1021 ctttgttata tacacttgtt atagtgaaaa cccgattatc tataagttgg atcaggcaaa
     1081 taaagaatgg gttgaaatga aaacacttga aggtgtgaca ctgtttgcca gctttttgtc
     1141 atcccatgca agaactgacc tttcggggat gatgaggaat agcgtctatt tctctaaagt
     1201 tcggttttat ggaaaacggt gtatatcata ctcgttagat caccaacgat actacccgcg
     1261 gaagcagtgt catgattggg gagaacaaga tccgtttgag agcatatggg tcgaaccacc
     1321 ggaagatatt tcaacattca actgggaaga ctaatgtaac agtgttttta gataaattat
     1381 tatccatcaa gagtggagtt ctgctgaata aagctaccag atgttcgcct atggtatctc
     1441 aaactcaata aacatccaaa tccaaatata tcatggataa acatggaaat ttgtgtatcc
     1501 ttaggacatc aagtataaat gtttactaat atagtaaatt atgtaatagg caacttagtt
     1561 taataattgt ttcctagtta ttcatgacat tgcttgttta aacttgaact gttgaacata
     1621 gggattagta tgcagatt
//
LOCUS       XM_071830589            2023 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840323), transcript variant X1, mRNA.
ACCESSION   XM_071830589
VERSION     XM_071830589.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2023
                     /gene="LOC139840323"
                     /note="uncharacterized LOC139840323; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840323"
     CDS             127..2010
                     /gene="LOC139840323"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686690.1"
                     /db_xref="GeneID:139840323"
                     /translation="MAAGKLGLYEKIRRFIRTLHFLIVMLASLLLLWLPILVSIGDIL
                     VPCVLISSFTCIRCYSFNEHLNRYDFRSSLTDVPVASMIRSLVITCVYMMYDGPVLSH
                     GQYLGTVTLCSIFSILVLSIKACVFTVNSQFEAEDSSSLSNERVLLKKSWGMNVLFLS
                     SVVFALGHTVIAYRMSCRARRKLMFNRSDPDSVFLSQLLSSIGYAKLPRSSIPADNRV
                     QKNDNQKRRKPLCGDPNHRELPVRLLADADSLFMVWNGLTIHYKLHIPNPPSRTLSST
                     TLLENPPSNSSPKTQHYLRRSFSIQIQDSSLYAPLLDGTSSSKEIPAFSVEEKDIDHF
                     ANKVGQKVPDVNGQVGVVLVHGFGGGVFSWRHIMAVLSRQVNCVVASFDRPGWGLTSR
                     PKPEDWEANKLPNPYMLDTQVDMLISFCKEMGLSSVVLIGHDDGGLLALKAAERVRST
                     ANSVGVKIKGVVLLTVSLSREVVPGLARILMRTSLGKKNLVHSLLRTEICQVVNRRAW
                     YDATKLTTDVLSLYKAPLCVEGWDEALYEIGKLSSDTVLSEQNASLLVKSVEDTPVMV
                     IAGAEDALVPITSVQTMASKFVNSTLVAISNCGHLPHEECPKVLLAAILPFISKLLSK
                     SDK"
     misc_feature    1177..1989
                     /gene="LOC139840323"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only]; Region:
                     MenH; COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 catttcatgg ctgatacgcc ggcctttatt ttatcatcag ttagggtttc cacattctcg
       61 ttttttcaat ttcatatctc acttggcctt acctaaaatt ttcttttatg ccgcaaatta
      121 acaaaaatgg ctgccggaaa attagggtta tatgaaaaaa tacgaagatt catacgtaca
      181 ttacattttt taattgtaat gctggcgtca ttattattat tatggcttcc gattctagtt
      241 tcaattggtg atatattggt tccttgtgtt ttaatctcaa gttttacttg tattagatgt
      301 tatagtttta atgagcattt gaatagatat gattttagaa gctccttgac agacgtaccc
      361 gtggcttcga tgatacggtc tctcgtaatt acttgtgttt atatgatgta tgatggcccg
      421 gtgctctcac atggacaata tcttggaaca gtgacattgt gctccatttt ctcgattctt
      481 gttttatcaa taaaagcttg tgttttcaca gtaaattccc agttcgaggc tgaagattca
      541 tcttctcttt caaacgagag ggttcttcta aagaagtcat gggggatgaa tgtactgttt
      601 ctgtcatctg ttgtttttgc tcttgggcat actgttattg cttatcgaat gagttgcaga
      661 gcacggagga agcttatgtt taaccgaagt gatcctgatt cggtgttttt gagccaactt
      721 ttatcttcaa tcggctacgc taagctcccg agatcttcaa ttcctgctga caacagggta
      781 cagaaaaatg ataatcaaaa aagaaggaaa cctttgtgtg gagatcccaa tcaccgcgaa
      841 cttccggtta gattactagc tgatgccgat agtttattca tggtatggaa tggactcacc
      901 attcactaca aacttcacat accaaatcca ccttcgcgta cactttcctc tacaactcta
      961 cttgaaaatc caccatcaaa ttcttctcca aaaacccaac attatcttcg taggagtttt
     1021 agtatacaaa ttcaagattc atctctttat gccccgctat tggatggaac cagttcgtct
     1081 aaagaaatac cggcttttag tgtagaagaa aaagatatcg accatttcgc caacaaagta
     1141 ggccaaaaag taccggatgt aaatgggcaa gttggggttg ttttagtgca cggttttggt
     1201 ggtggagtgt tctcatggag gcatataatg gcagtgttat ctcgacaagt taattgtgtt
     1261 gttgcttctt ttgatcgtcc cggttgggga ttgacatcta gaccaaagcc agaggattgg
     1321 gaggcaaata aactgcctaa tccttacatg ttagatacac aggttgatat gctgatatcg
     1381 ttctgtaaag agatgggact ttcttctgtg gtgcttattg gtcatgatga tggaggcctg
     1441 ctcgcattaa aggctgctga aagagttcga tcaacagcaa actccgttgg tgttaaaatt
     1501 aagggagtag tattgctgac agtaagtttg tcaagagaag tggttcccgg gttggctaga
     1561 atactcatgc gtacttcttt agggaagaag aacttagttc attcgctact tcggacagaa
     1621 atttgtcaag ttgttaaccg aagggcgtgg tatgatgcta ctaagcttac aacagatgta
     1681 ttaagcctgt ataaggcccc actgtgtgta gaaggttggg acgaagcatt gtacgagatt
     1741 ggcaagttat catctgatac cgtcctctcg gaacaaaatg cgtccttatt ggtgaaatca
     1801 gtggaagaca cccctgttat ggttattgca ggtgcagaag acgcccttgt tcctataact
     1861 tccgttcaaa ctatggcatc taaatttgtg aattctacac tagttgcaat atctaattgt
     1921 ggccatctgc ctcatgagga gtgccccaag gtgttgcttg cagcaatttt acccttcatc
     1981 agtaaactgc taagtaaatc agataaatag tatttattgt aag
//
LOCUS       XM_071830590            1684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840323), transcript variant X2, mRNA.
ACCESSION   XM_071830590
VERSION     XM_071830590.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1684
                     /gene="LOC139840323"
                     /note="uncharacterized LOC139840323; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840323"
     CDS             64..1671
                     /gene="LOC139840323"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686691.1"
                     /db_xref="GeneID:139840323"
                     /translation="MMYDGPVLSHGQYLGTVTLCSIFSILVLSIKACVFTVNSQFEAE
                     DSSSLSNERVLLKKSWGMNVLFLSSVVFALGHTVIAYRMSCRARRKLMFNRSDPDSVF
                     LSQLLSSIGYAKLPRSSIPADNRVQKNDNQKRRKPLCGDPNHRELPVRLLADADSLFM
                     VWNGLTIHYKLHIPNPPSRTLSSTTLLENPPSNSSPKTQHYLRRSFSIQIQDSSLYAP
                     LLDGTSSSKEIPAFSVEEKDIDHFANKVGQKVPDVNGQVGVVLVHGFGGGVFSWRHIM
                     AVLSRQVNCVVASFDRPGWGLTSRPKPEDWEANKLPNPYMLDTQVDMLISFCKEMGLS
                     SVVLIGHDDGGLLALKAAERVRSTANSVGVKIKGVVLLTVSLSREVVPGLARILMRTS
                     LGKKNLVHSLLRTEICQVVNRRAWYDATKLTTDVLSLYKAPLCVEGWDEALYEIGKLS
                     SDTVLSEQNASLLVKSVEDTPVMVIAGAEDALVPITSVQTMASKFVNSTLVAISNCGH
                     LPHEECPKVLLAAILPFISKLLSKSDK"
     misc_feature    838..1650
                     /gene="LOC139840323"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only]; Region:
                     MenH; COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 acgtacccgt ggcttcgatg atacggtctc tcgtaattac tttgtgtgat tgcaggtgtt
       61 tatatgatgt atgatggccc ggtgctctca catggacaat atcttggaac agtgacattg
      121 tgctccattt tctcgattct tgttttatca ataaaagctt gtgttttcac agtaaattcc
      181 cagttcgagg ctgaagattc atcttctctt tcaaacgaga gggttcttct aaagaagtca
      241 tgggggatga atgtactgtt tctgtcatct gttgtttttg ctcttgggca tactgttatt
      301 gcttatcgaa tgagttgcag agcacggagg aagcttatgt ttaaccgaag tgatcctgat
      361 tcggtgtttt tgagccaact tttatcttca atcggctacg ctaagctccc gagatcttca
      421 attcctgctg acaacagggt acagaaaaat gataatcaaa aaagaaggaa acctttgtgt
      481 ggagatccca atcaccgcga acttccggtt agattactag ctgatgccga tagtttattc
      541 atggtatgga atggactcac cattcactac aaacttcaca taccaaatcc accttcgcgt
      601 acactttcct ctacaactct acttgaaaat ccaccatcaa attcttctcc aaaaacccaa
      661 cattatcttc gtaggagttt tagtatacaa attcaagatt catctcttta tgccccgcta
      721 ttggatggaa ccagttcgtc taaagaaata ccggctttta gtgtagaaga aaaagatatc
      781 gaccatttcg ccaacaaagt aggccaaaaa gtaccggatg taaatgggca agttggggtt
      841 gttttagtgc acggttttgg tggtggagtg ttctcatgga ggcatataat ggcagtgtta
      901 tctcgacaag ttaattgtgt tgttgcttct tttgatcgtc ccggttgggg attgacatct
      961 agaccaaagc cagaggattg ggaggcaaat aaactgccta atccttacat gttagataca
     1021 caggttgata tgctgatatc gttctgtaaa gagatgggac tttcttctgt ggtgcttatt
     1081 ggtcatgatg atggaggcct gctcgcatta aaggctgctg aaagagttcg atcaacagca
     1141 aactccgttg gtgttaaaat taagggagta gtattgctga cagtaagttt gtcaagagaa
     1201 gtggttcccg ggttggctag aatactcatg cgtacttctt tagggaagaa gaacttagtt
     1261 cattcgctac ttcggacaga aatttgtcaa gttgttaacc gaagggcgtg gtatgatgct
     1321 actaagctta caacagatgt attaagcctg tataaggccc cactgtgtgt agaaggttgg
     1381 gacgaagcat tgtacgagat tggcaagtta tcatctgata ccgtcctctc ggaacaaaat
     1441 gcgtccttat tggtgaaatc agtggaagac acccctgtta tggttattgc aggtgcagaa
     1501 gacgcccttg ttcctataac ttccgttcaa actatggcat ctaaatttgt gaattctaca
     1561 ctagttgcaa tatctaattg tggccatctg cctcatgagg agtgccccaa ggtgttgctt
     1621 gcagcaattt tacccttcat cagtaaactg ctaagtaaat cagataaata gtatttattg
     1681 taag
//
LOCUS       XM_071830591            1101 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides anthranilate synthase beta
            subunit 2, chloroplastic-like (LOC139840324), mRNA.
ACCESSION   XM_071830591
VERSION     XM_071830591.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1101
                     /gene="LOC139840324"
                     /note="anthranilate synthase beta subunit 2,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139840324"
     CDS             60..896
                     /gene="LOC139840324"
                     /codon_start=1
                     /product="anthranilate synthase beta subunit 2,
                     chloroplastic-like"
                     /protein_id="XP_071686692.1"
                     /db_xref="GeneID:139840324"
                     /translation="MVAFTLPQNSSIQLRSSIPPQKTLCLNRATQLVLVNDVTLCGMR
                     SKETRILPRISHAISEKESSSSLGGLAKNNNPIIVIDNYDSFTYNLCQYMGELGCNFE
                     VYRNDELTVDELKTKKPRGILISPGPGAPQDSGISSQTVLELGPHVPLFGVCMGLQCI
                     GEAFGGKIVRSPYGVIHGKSSLVYHNEGGENGLFAGVSNPFTVGRYHSLVIEKETFPS
                     DELEITAWTEDGLVMAARHKVYRHLQGVQFHPESIITTEGKQIVGNFIKLIETKEAVS
                     GN"
     misc_feature    270..893
                     /gene="LOC139840324"
                     /note="anthranilate synthase; Region: PLN02335"
                     /db_xref="CDD:177969"
     misc_feature    order(435..440,444..446,519..524,531..533,675..686)
                     /gene="LOC139840324"
                     /note="glutamine binding [chemical binding]; other site"
                     /db_xref="CDD:153214"
     misc_feature    order(519..521,804..806,810..812)
                     /gene="LOC139840324"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:153214"
ORIGIN      
        1 gcaaaagggc ttcttcaagc tgccattgca acataagagg attgcttgaa gttacaacaa
       61 tggtagcttt tacattgcct cagaactcat ccattcaact acgatcctca ataccgcctc
      121 agaaaacact atgtcttaac agggcgacgc agttagttct agtaaacgat gttaccttgt
      181 gcggtatgcg atcaaaggaa actagaattt taccgagaat atcgcatgcc atctcggaga
      241 aagaatcatc aagctcgttg ggtggtttgg ccaaaaacaa caacccgata attgtcatcg
      301 acaattatga tagcttcact tataaccttt gccagtatat gggagagctg ggatgcaact
      361 ttgaggttta ccggaacgat gagcttactg tagatgaact caaaacgaaa aaaccaagag
      421 gaattcttat atcgcctgga ccaggtgcac cacaagattc aggaatatca tcgcaaacgg
      481 tactggaact tggacctcat gtacctttgt ttggtgtatg catgggacta cagtgcatcg
      541 gtgaagcttt tggagggaaa atcgtgcgct ctccttatgg tgttattcat ggaaaaagtt
      601 ccctggttta tcataacgag ggcggggaaa atggtttgtt tgcaggcgta tcaaacccgt
      661 ttacggttgg tagatatcac agccttgtga ttgagaaaga gacgtttcct agtgatgaac
      721 ttgagattac agcttggaca gaggatggac tcgtgatggc tgctcgtcac aaagtatacc
      781 gacatctgca aggagtacag ttccatccag agagcattat aacaactgaa ggcaagcaaa
      841 ttgttggtaa cttcatcaaa ttgattgaga ccaaggaagc tgtttctgga aactaaactc
      901 tgctcagtaa agataaagag ctttctacaa tgaataaaga tattggctac atagtagatt
      961 tacccatttc aaccttctat ttttagatgt tcagtccctt tgacattttg gatttttaag
     1021 ctcaaagatt taagtccatg attggttttt ggtagtagtt tttataccat agtttctttg
     1081 ggatgatgga tgggttgaat g
//
LOCUS       XM_071830593            1269 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides superoxide dismutase [Fe],
            chloroplastic-like (LOC139840325), mRNA.
ACCESSION   XM_071830593
VERSION     XM_071830593.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1269
                     /gene="LOC139840325"
                     /note="superoxide dismutase [Fe], chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 12 Proteins"
                     /db_xref="GeneID:139840325"
     CDS             61..996
                     /gene="LOC139840325"
                     /codon_start=1
                     /product="superoxide dismutase [Fe], chloroplastic-like"
                     /protein_id="XP_071686694.1"
                     /db_xref="GeneID:139840325"
                     /translation="MASVTLTTTPSHLTSSFLSSTEFCGLSRSFQLPHKQKRCLKKSV
                     PAKISASIDLKPPPYELHALEPHMSQETLEYHWGKHQRGYVNNLNKQIEGTKLDEMTL
                     ESIIAASYNKGDLLPAFNNAAQVWNHEFFWESMKPGGGGKPSGELLELINRDFGSFEG
                     LIHEFKAAATTQFGSGWAWLVYKEHKLDVPNARNPRPSEEDKKLVVVKSPNAINPLVW
                     EYHPLLTLDVWEHAYYIDFENRRPDYVSTFLNKLVSWETVSSRLEAAKVLIAEREKEM
                     EEIDAIDDLDTIEPEDTDIYFESETEDGEDFLDVE"
     misc_feature    70..975
                     /gene="LOC139840325"
                     /note="iron superoxide dismutase; Region: PLN02685"
                     /db_xref="CDD:215369"
     polyA_site      1269
                     /gene="LOC139840325"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttcttcag tcttcataat catatcctaa ctaaaagctc tgtacaccac catactgata
       61 atggcgtccg tgactctcac cacaacccct tctcatctta cttcgtcatt tctttcttct
      121 acagaatttt gtgggttatc tcggagcttt caattgccac ataagcagaa acggtgtctt
      181 aagaaatcgg ttcctgcgaa aatatcagcc agtattgatc tgaagccgcc tccttatgaa
      241 ttgcatgctt tagaaccaca tatgagccaa gaaacattgg aatatcattg gggaaaacac
      301 caaagaggtt acgttaacaa cctaaacaag caaatcgagg gaaccaaatt agatgaaatg
      361 acattagaaa gcataatagc cgcttcatac aacaaaggtg atcttcttcc tgccttcaac
      421 aatgctgcac aggtttggaa ccatgaattt ttttgggagt cgatgaaacc tggtggtggt
      481 ggaaagcctt ctggtgaact tttagagttg ataaacagag atttcggttc atttgaaggc
      541 ttaatacatg agtttaaggc agctgctact actcagttcg gatctggttg ggcttggctt
      601 gtatataaag agcataaact tgatgtacca aatgctagga atccacgtcc atcagaggag
      661 gacaagaagc ttgttgtggt gaaaagccct aatgcaatta atcctcttgt gtgggagtat
      721 catcctcttc taactttaga tgtctgggag catgcatact acattgactt tgagaaccgt
      781 aggcctgatt atgtatcaac tttcctgaat aagctggtat catgggaaac ggtgagttcc
      841 aggctggaag cagccaaggt tctaatagca gagagggaaa aagaaatgga ggaaattgat
      901 gcaattgatg acctggacac aatagaacca gaagatacag atatctactt tgaaagtgag
      961 acagaggatg gtgaggattt tctggatgtt gaatgattga tattctgatt ctggttttgt
     1021 ctcgaagatt aattacaagt taattgtgat gttattgttg ttagctcatg taaaaaaaaa
     1081 aaatttgtaa cgtttaggat tagaatatta gaaaaatcag atggtgttgt atttattagc
     1141 agctgttagt ctgttacgag attaagaagg tttagaagga aattatttga ttctacaaac
     1201 tccggttttt gttacatgac acaatatgga ttcacaaagg tagttgggga tgaaaaaatt
     1261 ttgtttcaa
//
LOCUS       XR_011757343            1518 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840326), ncRNA.
ACCESSION   XR_011757343
VERSION     XR_011757343.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1518
                     /gene="LOC139840326"
                     /note="uncharacterized LOC139840326; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840326"
     ncRNA           1..1518
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840326"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840326"
ORIGIN      
        1 cttccttcac tctttcctct ttcctcttat ttaccatcca gacctttctt cctccatcaa
       61 tcgtcaacac cctccgtcat catcatcgtc atcatcatcc gcgatcatca tcggctcagt
      121 catcatcatc atcaccacca ccaaccggtt ccacggctca gtaatcattc cagtacgttc
      181 tacagaggat aagaaatggc gacataggga gagaaggaag gatttcatct tcaactcatc
      241 accttcatac caactccttg aaataattca ccctaaactt aagaattcca aaaggaattg
      301 actccgtacg tgatatagtg attgctaaga gtctagcaat gagactttct gaaaagatat
      361 ggactaatgg taggtgttta tctagcgcta caaatggact ataacaggtt gttcattgtg
      421 gaaagaaatt ttcaggctgg taaatcaatg gacgatatcg gtcttaactt cacgatgtca
      481 ttcatcaaaa ttaccggaag aggagatcat acattttctg gaatgacgtt tggacgggaa
      541 aagacagtct caagtcaaga tttcagcggc tatacaactt agaatcaaat aaggaggcaa
      601 tggggtccta acgaattatg tgcaacaata atcaattcat ctaaagttgg aagtggatat
      661 gtacacctcg tgggagagct attgatgagc aatcaaattt aacccaacta attaatgttt
      721 tatctttaac tgacaggccg gacgtgcggg agtggagtct agatgtatcg aggcgcttca
      781 caaccaagac tttatcactg ctaatcgacg aaatcaagct cgtcgatgaa acctctaacg
      841 ttgaaactat atgcaataat acattacctc agaaaatcga catcttcatt tggcgttcac
      901 tcatgaaaag gattccaaca agggcggaac tcgacaaaat aggaatcaac atggattata
      961 tactttgccc attatgtaac acacatattg aaacggtgtt aacacatttt ggttaattat
     1021 atcgtggtga aaaatatatg atcgttgatc tttaaatggt ggaactttaa ctcaatgttg
     1081 atatcgtctt tcgaagaagc ttttgtagaa aatcggaatc aagccaatac aacgacgggt
     1141 aaaatcattt ggcaatgggt atgtggctac ctaatttgga aagggcgtaa tcaaaaggtg
     1201 ttttaaaaaa aagtcgtggg atccgaatac aatcttttcc gaaatacaaa tgcaaagtta
     1261 caactggatt tctaagagat acaaaaaggc gtcactcgat tgggctaatc aatccgggat
     1321 cgtatgtgtc atcgtctaat cctccaacca gaatcggcta agcacaaaga aaataagaat
     1381 ctaatatctc ggtcatctcg atgtaatact gttttgtaag tagccagcta cttggttaaa
     1441 ttcattgctt aaaggcgtgc ctcatcttta ttgggctact tatatactac agtatgtaaa
     1501 tatttatagt tgtaataa
//
LOCUS       XM_071830594            3733 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kinesin-like protein KIN-4A
            (LOC139840327), mRNA.
ACCESSION   XM_071830594
VERSION     XM_071830594.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3733
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3733
                     /gene="LOC139840327"
                     /note="kinesin-like protein KIN-4A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840327"
     CDS             439..3549
                     /gene="LOC139840327"
                     /codon_start=1
                     /product="kinesin-like protein KIN-4A"
                     /protein_id="XP_071686695.1"
                     /db_xref="GeneID:139840327"
                     /translation="MMDTVPAIAATAADDCCVKVAVHIRPLIGDEKLQACKDCITVVP
                     GKPQVQLGTHSFTFDHVYGSSGSPSSAMFEDCVSPLVDGLFQGYNATVLAYGQTGSGK
                     TYTMGTGFKDGCQTGLIPQAMHALFNKIESLQNQIEFQLNVSYIEILKEEVHDLLDNK
                     SEITNVPTGKLNSPGKPPIQIRETSNGVITLAGSTECSVKTLKEMTDCLEHGSLSRAT
                     GSTNMNNQSSRSHAIFTITLEQMRKPNSGDNNSNDSMCDEYLCAKLHLVDLAGSERAK
                     RTGSDGMRFKEGVHINKGLLALGNVISALGDEKKRKEGAHVPYRDSKLTRLLQDSLGG
                     NSRTVMIACVSPADINAEETLNTLKYANRARNIQNKPVVNRDPVSSEMLKMRQQLEFL
                     QAELCARGGGSSIELQVLRERISWLEATNQNLCRELHEYRSRGVAIDQSEKVGNSICV
                     KNEELKCGLKNVDSSDYQMSESGDSGVIEEEAAKEWEHTLLQDSMDKELHELNKRLEQ
                     KESEMRLFEGSDTMTLKQHFGKKIMELEDEKRAVQIERDRLLTELESLSASSDAQAQK
                     VRDLHSHKLKSLESQIQELKKKQENQVQLLRQKQKSDEAAKRLQDEIQFIKAQKVQLQ
                     HKIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKMVLQRKTEEAAM
                     ATKRLKGLLEARKPTRDNSVTTNGNGTNGQSNEKVLQRCLDHEVEVMVNVHEVRHEYE
                     KQSQVRAALAEELAVLRQVDEFALKGVSPPRGKNGFSRACSLSPNARMARISSLESML
                     SISSNSLVSMASQLSEAEERERAFASRGRWNQLRSMADAKNLLQYMFHSLADARCQSW
                     EKDLEMKEMEEQLKELVGLLRQSELKRKEVEKELKLRDETAATALSSSQSGNSHNSLK
                     HLADDLSGPLSPNSVPAPKQLRYTAGIANGLVREAAAFIDQKRKMVPVGQLSLKKSTL
                     VGNSPGKLWRWKRSHHQWIMQFKWKWQKPWRLSELIRHNDETMMRSKPRAQAAALPEV
                     MYHNRH"
     misc_feature    484..1542
                     /gene="LOC139840327"
                     /note="Kinesin motor domain, KIF4-like subfamily; Region:
                     KISc_KIF4; cd01372"
                     /db_xref="CDD:276823"
     misc_feature    order(511..513,724..726,733..735,739..750,1240..1242)
                     /gene="LOC139840327"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:276823"
     misc_feature    order(1396..1398,1405..1407,1414..1416)
                     /gene="LOC139840327"
                     /note="microtubule interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276823"
     misc_feature    <1660..2898
                     /gene="LOC139840327"
                     /note="Synaptonemal complex protein 1 (SCP-1); Region:
                     SCP-1; pfam05483"
                     /db_xref="CDD:114219"
     misc_feature    2026..>2523
                     /gene="LOC139840327"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; Region: EnvC; COG4942"
                     /db_xref="CDD:443969"
ORIGIN      
        1 ccaccaactt ttgctttttt cccctccttt cctttttctt ttatttattt tctttattct
       61 ttaataatca ccaccactga taataatcat tcccgggaaa acacaagggg tacttcggta
      121 aattcctcgc ctacaaacgc ggacaatgaa agccgtttcc ggtcagctgt ctactaaact
      181 cacaattaac acatttattt cccaacctac cctttctttt tttccttttt tatttaattt
      241 tactttcttc tctctcacat acaaacacag tttggtgtgt gttatatgat ttagttggtt
      301 cccctgctgt tagaactact ctaaaaaacc tccataaaaa taaaattact ccctcaattt
      361 acaaacaact taaaatcgct accattaacg gctggcgtta accatttgat aattgtatta
      421 taattgtatt ataattgtat gatggatacg gttccggcga tagctgctac ggcggccgat
      481 gattgttgtg tgaaagtagc ggtgcatata agacctttaa ttggagacga aaagcttcaa
      541 gcgtgtaaag attgtatcac ggttgtaccg gggaaacctc aggtgcaatt aggtacacat
      601 tcgttcactt ttgatcatgt gtatggaagt agtggttcac catcatcagc catgtttgaa
      661 gactgtgttt caccccttgt tgatggtcta tttcaaggat ataatgctac tgttctagcc
      721 tatggccaga cgggctcagg caagacatac acaatgggca ctggattcaa agatggttgc
      781 caaactgggc ttattcctca agctatgcat gctttattca acaaaattga aagtttacaa
      841 aatcaaatag agttccaatt gaacgtttct tatattgaga ttttaaaaga agaagtacat
      901 gacttgttgg ataacaagtc ggagataaca aatgtgccga cagggaaatt gaatagtcct
      961 ggaaaaccac cgattcaaat tcgtgaaacg tctaatggtg ttataacgct tgcgggatcg
     1021 accgaatgta gtgtaaagac acttaaagaa atgactgatt gtcttgagca tggatcattg
     1081 agcagggcaa cagggagtac aaatatgaat aatcaatcaa gtcgatcaca cgcaatcttc
     1141 acgatcacat tagagcaaat gcgaaaacca aactctggtg ataacaactc aaatgattca
     1201 atgtgtgatg aatatctttg cgcaaaattg catttagttg atctcgctgg atctgaacga
     1261 gctaaaagaa ccggttctga tggtatgcgt ttcaaagaag gagttcatat taacaaaggc
     1321 cttcttgcac ttggaaatgt cattagtgcc cttggtgatg agaaaaaacg taaagaaggt
     1381 gctcatgttc catatcgaga tagtaaactt actcgtctct tgcaggactc actcggtggg
     1441 aacagcagaa ctgttatgat tgcttgtgtt agtcctgctg atataaatgc tgaggaaacg
     1501 cttaacacat taaagtatgc gaaccgagct cggaatatcc agaataagcc tgtggtgaat
     1561 agggatccag tgtctagtga aatgttaaaa atgcgtcaac agttagaatt tttgcaagca
     1621 gaactttgtg ctcgtggtgg aggttcttca atagaactac aggttcttcg ggaacggatt
     1681 tcttggcttg aagctactaa tcagaatcta tgtagggaac ttcatgaata ccgaagcaga
     1741 ggtgtagcca ttgatcaatc tgaaaaggta ggtaattcga tttgcgtgaa aaatgaagag
     1801 cttaaatgtg gtttgaagaa tgtcgattct tctgattatc agatgagtga aagtggcgat
     1861 tcgggggtga tagaggaaga agcagctaaa gaatgggagc atactctttt acaagactct
     1921 atggacaagg agttgcatga attaaataaa cgtttagaac agaaagagtc ggaaatgaga
     1981 ctttttgaag gatccgatac catgactctt aagcaacatt ttggaaagaa gattatggaa
     2041 cttgaggacg agaagcgggc agtgcagata gaaagggata gattgctaac tgaacttgaa
     2101 agcctttctg cttcttcaga tgctcaagca caaaaagttc gagatttgca ctcgcataaa
     2161 ttgaagtctc ttgaatcgca gattcaggag cttaagaaga aacaagagaa tcaagttcag
     2221 cttttgaggc aaaaacaaaa gagtgatgaa gcagcgaaaa gattacaaga tgaaatacaa
     2281 ttcattaagg cacaaaaggt tcaactacaa cataagataa aacaagaggc ggaacaattc
     2341 cgccagtgga aagcatctcg tgagaaagaa cttctgcagc taaagaaaga agggagaagg
     2401 aatgaatacg aaagacacaa actacaggcc ctaaatcaac gtcaaaaaat ggtacttcag
     2461 cggaagacag aagaggccgc aatggcaacc aaaaggctta aaggattgct agaagcccgc
     2521 aagcctaccc gggacaactc ggtgactacc aatggaaatg gaacaaacgg acagagcaat
     2581 gagaaggtat tgcagcgttg ccttgatcac gaggttgaag tgatggtcaa tgtgcatgaa
     2641 gttcgacatg aatatgagaa acaaagccaa gtacgggctg cacttgcaga agagctagcg
     2701 gttctcagac aagttgatga atttgcttta aaaggggtta gccctccaag aggaaagaat
     2761 ggtttttcta gggcgtgttc tttgtcacca aatgcaagaa tggcaagaat atcttcattg
     2821 gagagtatgt taagcatttc atcaaattca cttgtatcta tggcttcgca attatctgag
     2881 gcagaagaaa gggaacgtgc gtttgctagc cgtggacgtt ggaaccagtt acgttcgatg
     2941 gcagatgcaa agaacttgct tcaatatatg tttcattctc ttgcagatgc aaggtgtcaa
     3001 tcatgggaaa aagatcttga aatgaaggaa atggaagaac aattaaagga gcttgtgggg
     3061 ttacttagac aaagcgaatt gaaacgaaaa gaagtcgaga aggagctaaa attacgggac
     3121 gaaacagctg caacggcatt gtcttcgtca cagtctggaa attcacataa ttcactgaaa
     3181 cacttggctg atgacttgag tggtccgtta tctccaaact cggttccagc acccaaacag
     3241 ctaagataca cagctggcat agccaatggt ttagtccgcg aagcagcagc cttcatcgac
     3301 cagaagcgaa agatggttcc agttgggcag ttgtcactaa aaaagtcaac gctggtcgga
     3361 aattcgcctg ggaaactatg gagatggaag aggagtcacc atcaatggat aatgcagttc
     3421 aaatggaagt ggcagaaacc atggagactt tcagaactca ttagacataa cgatgaaaca
     3481 atgatgagat caaagcctcg tgcacaggcg gctgctttgc cggaagtgat gtatcataat
     3541 agacactaag tttataacaa catttggtga tttgtatatt cttcattggg atctagagag
     3601 catgtagatg tgtatttttg agttagggtt gttttcataa atcagttgta gtaaatgtag
     3661 taatatacaa gtgttgtatt cattataaca aaagatacaa acatgtaatt ctttttatct
     3721 ttgttgtatt att
//
LOCUS       XM_071830595            2075 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable inactive receptor
            kinase At5g67200 (LOC139840328), mRNA.
ACCESSION   XM_071830595
VERSION     XM_071830595.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2075
                     /gene="LOC139840328"
                     /note="probable inactive receptor kinase At5g67200;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139840328"
     CDS             1..1905
                     /gene="LOC139840328"
                     /codon_start=1
                     /product="probable inactive receptor kinase At5g67200"
                     /protein_id="XP_071686696.1"
                     /db_xref="GeneID:139840328"
                     /translation="MKPTFIHTTIILLFSFYTLTLSSSNNAIEPLLSFKSKADLSNKL
                     VTYSVTNNSTVCKWQGVKCLNNDVVVQLVLENLNLSGVFASNTLTRLDQLRVLSLRNN
                     SLTGPIPDLSMLVNIKALFLDSNYFSGVIPLSISSLHRLRTLDLSNNELSGNIPVELI
                     KLDRLNYIRLDSNRFNGSIPPLNQSGLEIFNVSVNHLSGLVPVTATLARFGPNMFSVN
                     GELCGEIVHKQCEIVGMNSTKNKSSTSDLQEMEGFEDLKSRKREKFGLVVGFSGGLVL
                     VISSVLCVIMSIKISKKKKKRKKIIATRELMEMAEAADAAAEVMRMEEKNELERKVRM
                     LQQGVAIKKSGNLVFCTADSHVYTIEQLMRASAELLGSGMMGTTYKALVDNRVIVCVK
                     RLDSSRLVGTTNEEFEMLMEVVGKVRHTNVVTLRAYFQTKDEKLLVYDYQPNGSLFSL
                     IHVSQSTMARPLHWTSCLKIAEDVAQGLLHLHQTCNLVHGNLKSSNVLLDSDFEARIS
                     DYHLSHLFHHESNAYRAPEIEPNQEPTAKSDVYSFGVVLLELLTGKAASSHPKVSPDE
                     VVKWVKSSRDNGGAGGGVVEEKRLEMMTGVAIACGVRSPEMRPTMWQVIEMLQKIKEA
                     AVMEDCGLDP"
     misc_feature    <214..1857
                     /gene="LOC139840328"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    220..279
                     /gene="LOC139840328"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    280..348
                     /gene="LOC139840328"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    349..420
                     /gene="LOC139840328"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    421..492
                     /gene="LOC139840328"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    493..558
                     /gene="LOC139840328"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1108..1863
                     /gene="LOC139840328"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1108..1119,1126..1128,1132..1134,1168..1170,
                     1174..1176,1267..1269,1315..1326,1471..1473,1483..1488,
                     1492..1494,1522..1527)
                     /gene="LOC139840328"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgaaaccaa ctttcattca caccaccatt atccttttat tttcattcta cactttaact
       61 ttatcatcat caaacaatgc aattgaaccc ttattgtcat tcaaatctaa agccgatctt
      121 agcaacaaac ttgtaactta ttcagttacc aacaactcca ctgtatgcaa atggcaagga
      181 gtaaaatgtt tgaacaacga cgtcgttgtt caactcgttc tcgagaactt aaacctttct
      241 ggcgttttcg cctcgaatac attgactcgg ttggaccagt tacgagttct gagtttacgt
      301 aacaactcgc ttactggacc gattcctgat ctttctatgt tagttaatat caaagcgttg
      361 tttcttgata gtaactactt tagtggcgtg attccgttat ctatttcgtc gcttcatcgt
      421 ctgcgaactt tagatctttc gaataatgaa ttatcgggga atattccggt tgagttgatt
      481 aaactggacc ggttgaatta cattcgtctt gattcaaatc ggtttaatgg ttcgattccg
      541 cctcttaatc aatctggact tgaaatattc aatgtttcgg ttaatcattt atccggttta
      601 gtaccggtca cggctacact tgctagattc ggcccgaata tgttctcggt taatggtgaa
      661 ctttgtggtg agattgttca taaacaatgt gagattgttg gtatgaattc gacaaagaat
      721 aaatcatcca catcggattt gcaagagatg gagggttttg aggacttgaa atcgagaaag
      781 cgtgagaaat ttgggttggt agttggtttt tcgggcggtt tggtgttggt aattagttcg
      841 gttttatgtg tgataatgtc gattaagata tcgaaaaaga agaaaaagag aaaaaagatt
      901 attgcgacac gcgaattgat ggaaatggcg gaggccgcag atgctgcggc cgaggtgatg
      961 aggatggaag agaagaatga gttggaaaga aaagtaagga tgttgcaaca aggggtggct
     1021 attaaaaaga gtgggaattt agtgttttgc actgcggatt cacacgtgta cactatcgag
     1081 caattaatga gggcgtctgc agagttgttg ggaagcggaa tgatggggac cacgtataaa
     1141 gcgttagtgg ataatcgcgt gattgtgtgt gtgaagaggc ttgattcgtc gagattagtt
     1201 ggaacgacga atgaggagtt tgagatgttg atggaggtcg tgggtaaggt gcgccacacg
     1261 aatgttgtga cgcttcgggc ttattttcag actaaagatg aaaagctcct tgtttacgat
     1321 taccaaccga atggcagtct cttctcacta attcacgtat cacaatccac aatggcacga
     1381 ccgctacatt ggacatcatg cctaaaaatc gcggaagacg tggcacaagg actcttgcac
     1441 cttcatcaaa cgtgcaacct cgtccacgga aatctcaaat catccaacgt tctcctcgac
     1501 tctgattttg aagctcgtat atcggattac catctctcgc atttattcca ccacgagtcc
     1561 aacgcgtaca gggcacccga aattgaacca aatcaagaac caacggccaa atcggatgtt
     1621 tactcattcg gggttgtttt gctagagcta ttaaccggga aggctgcatc gagccacccg
     1681 aaagtgtcac cagatgaggt ggtgaagtgg gtgaagtcaa gtagggacaa tggtggtgct
     1741 ggtggtggtg tggtggagga gaagcggttg gaaatgatga cgggggttgc aatagcatgt
     1801 ggtgtgaggt caccggaaat gagacccacc atgtggcaag taattgaaat gttacaaaag
     1861 attaaagaag ctgctgtaat ggaagattgt ggattggatc catgaatttg ggaccaatca
     1921 taaaattaca tcaacaaaag ttacgagtat acctacaatc tttatggttt ctttggttgt
     1981 taagttgtat aactgaaatt acagttgcat ttaatttttt tattgacatg ttgtgcaata
     2041 gtgaccgtga tctccttatg ataatatgac atgaa
//
LOCUS       XM_071830596            1004 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glucuronoxylan
            4-O-methyltransferase 1-like (LOC139840329), mRNA.
ACCESSION   XM_071830596
VERSION     XM_071830596.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1004
                     /gene="LOC139840329"
                     /note="glucuronoxylan 4-O-methyltransferase 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins"
                     /db_xref="GeneID:139840329"
     CDS             1..885
                     /gene="LOC139840329"
                     /codon_start=1
                     /product="glucuronoxylan 4-O-methyltransferase 1-like"
                     /protein_id="XP_071686697.1"
                     /db_xref="GeneID:139840329"
                     /translation="MRNKTGKYTISSKPILLTIFIVLVFILVIFVRSSYTPQTHQNPS
                     ISSDINVQSKPTTCPPVEHKLMSANKLPAATAETLVHYVTSNITPQQTYKEISVSLRV
                     LNKKSPCNFLVFGLGYDSPMWATLNQGGRTVFLEEDKSWIQQIQGKFPTLESYHVVYD
                     TKVNRASDLMEIGKREECKRVGDPRVSECELSLKRNLPDEVYDVEWDLIMVDAPTGYH
                     DEAPGRMKAIYTAGLMGRNREEGETDVFVHDINRFVEDQFSKEFLCEGYLKEEEGRLR
                     HFTIPSHRARLGRPFCPL"
     misc_feature    208..876
                     /gene="LOC139840329"
                     /note="Polysaccharide biosynthesis; Region:
                     Polysacc_synt_4; cl04661"
                     /db_xref="CDD:383809"
ORIGIN      
        1 atgagaaata aaacaggaaa atacacaatc tcttcaaaac caattcttct caccatcttc
       61 attgtactcg tttttatttt agtaatcttc gtacgatcat cttatacacc acaaacccat
      121 caaaatccgt ctatttcttc cgatataaat gtacaatcga agccgacaac ttgtcctcca
      181 gtagagcaca aattaatgtc ggccaacaaa ctcccagccg ccacggccga gacacttgtg
      241 cattacgtca cttcaaacat aaccccgcaa caaacataca aagaaatctc agttagtctg
      301 agagttttga acaagaaatc accttgtaat ttcttagttt ttgggttggg gtatgacagt
      361 ccgatgtggg ccacccttaa tcagggtggc cgcactgtgt ttttagaaga agataagtca
      421 tggatccaac aaattcaggg gaaattcccc actttggagt cataccatgt tgtgtatgac
      481 accaaggtga accgtgcatc ggatttaatg gagatcggaa aacgtgaaga gtgtaagagg
      541 gttggtgatc caagggtatc agaatgcgag ttatcattga aaaggaactt gccagatgag
      601 gtgtatgatg tcgaatggga tttgataatg gtagacgcac caacgggcta ccacgatgaa
      661 gctccgggga gaatgaaggc gatatacaca gcggggttaa tgggccgaaa cagagaagag
      721 ggggaaaccg atgtgtttgt gcacgatatc aataggttcg tggaagatca gttttcgaag
      781 gagtttttat gtgaaggata tttgaaggag gaagaaggaa ggttgagaca tttcacgatt
      841 ccaagtcata gggctcgttt gggtagacca ttttgtcctc tttagatgtt tttttgttgt
      901 gattgttacg acgggtgtat ttgttattta cttgttattg taactttaaa aagactatta
      961 tgagattctt tattatatct ttgaataacc caaaaagact attt
//
LOCUS       XM_071830597            1323 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840330), mRNA.
ACCESSION   XM_071830597
VERSION     XM_071830597.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1323
                     /gene="LOC139840330"
                     /note="uncharacterized LOC139840330; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840330"
     CDS             87..1097
                     /gene="LOC139840330"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686698.1"
                     /db_xref="GeneID:139840330"
                     /translation="MAAGVLNFTSLPPNTKPIWRYQKAKLATSNSMAFVIKSSAEVSD
                     TSSSTSVKNGINPITPPPNFKQPEPKPFAIRPDKIIDIIGAGLNLVFRLGTGALVSGY
                     SVSFVPKNEFPPGQYALEVGGFVAKETSKLGPRPAKPIEIYEFEGCPFCRKVREIVAV
                     LDLDILYYPCPRNGPTFRPKVGQMGGKKMFPYMVDPNTGVSMYESDDIIKYLVKNYGD
                     GNVPLSLKLGLLTTLTAGFAMIGRMGKGSMYTKAKMPPQPLEVWSYEASPFSKLVREV
                     LVELELPHILHSCARGSPKRQELYEKVGRFQAPYLEDPNTGVKMFESAEIVDYLRATY
                     AL"
     misc_feature    501..734
                     /gene="LOC139840330"
                     /note="GST_N family, 2 repeats of the N-terminal domain of
                     soluble GSTs (2 GST_N) subfamily; composed of
                     uncharacterized proteins. GSTs are cytosolic dimeric
                     proteins involved in cellular detoxification by catalyzing
                     the conjugation of glutathione (GSH) with a...; Region:
                     GST_N_2GST_N; cd03041"
                     /db_xref="CDD:239339"
     misc_feature    order(534..536,540..545,549..554,561..566,702..704,
                     711..716)
                     /gene="LOC139840330"
                     /note="putative C-terminal domain interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:239339"
     misc_feature    order(534..536,651..659,696..701)
                     /gene="LOC139840330"
                     /note="putative GSH binding site (G-site) [chemical
                     binding]; other site"
                     /db_xref="CDD:239339"
     misc_feature    order(651..653,693..698,702..707,714..716)
                     /gene="LOC139840330"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239339"
     misc_feature    858..1088
                     /gene="LOC139840330"
                     /note="GST_N family, 2 repeats of the N-terminal domain of
                     soluble GSTs (2 GST_N) subfamily; composed of
                     uncharacterized proteins. GSTs are cytosolic dimeric
                     proteins involved in cellular detoxification by catalyzing
                     the conjugation of glutathione (GSH) with a...; Region:
                     GST_N_2GST_N; cd03041"
                     /db_xref="CDD:239339"
     misc_feature    order(891..893,897..902,906..911,918..923,1056..1058,
                     1065..1070)
                     /gene="LOC139840330"
                     /note="putative C-terminal domain interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:239339"
     misc_feature    order(891..893,1005..1013,1050..1055)
                     /gene="LOC139840330"
                     /note="putative GSH binding site (G-site) [chemical
                     binding]; other site"
                     /db_xref="CDD:239339"
     misc_feature    order(1005..1007,1047..1052,1056..1061,1068..1070)
                     /gene="LOC139840330"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239339"
     polyA_site      1323
                     /gene="LOC139840330"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgccaacaaa atcctgctag ttttctcagc agcattcatc gaacactttc gaaactcaaa
       61 accccaacct cttgtcagac gatataatgg ccgccggcgt tctaaacttc acttcactac
      121 caccgaacac taaaccaatt tggcgatatc aaaaggcgaa attggcaacc agtaacagca
      181 tggcttttgt aatcaaatca tcagcagaag tatcagatac atcgtcatca acatcagtta
      241 aaaatgggat taatccgatt acacctccgc ccaatttcaa gcaaccagaa ccgaagcctt
      301 ttgcaattag accggataag attattgata ttattggtgc tggtttaaat cttgtgttca
      361 gattgggaac tggtgctctt gtttctgggt actcggtttc atttgtccca aagaatgaat
      421 ttccacctgg ccagtatgct cttgaagttg gaggctttgt agcaaaggaa acatcaaaac
      481 tcgggccaag acctgcaaaa cctattgaaa tatacgagtt tgaaggctgc cccttctgtc
      541 gaaaagtgag ggaaattgtt gcagtgttgg atcttgatat attatattat ccttgcccga
      601 gaaacggtcc aacttttcgt cccaaagttg gccaaatggg tggtaaaaag atgtttcctt
      661 acatggtaga tccaaataca ggagtttcga tgtatgaatc tgatgacatt ataaagtatc
      721 ttgtcaagaa ttatggtgat ggaaacgtgc cgttatcttt gaaacttggt ctgctgacaa
      781 ctttgactgc agggtttgcc atgattggtc gtatggggaa ggggagcatg tataccaagg
      841 caaagatgcc accgcaacct cttgaagtat ggtcgtatga ggcgtcaccc ttttcgaaac
      901 ttgtacgtga agtgcttgta gagttggagc taccacatat tcttcacagt tgtgcacgtg
      961 gcagcccaaa acggcaggaa ttatatgaga aggttggccg cttccaggca ccttatttag
     1021 aagatccaaa cacaggggtg aaaatgtttg agagcgctga aatcgtcgac tatttaagag
     1081 ctacttacgc tctttaagat atacttgtcg accccgtttt tatgtacatc aatctgaacg
     1141 gaccttaaaa aaaagatcag ttaattgtaa atctatataa ctttagaact atacttccat
     1201 gtaaacttca acagtaacct acatgaaaag cttgagtgtc catagttgtc ataagtacaa
     1261 tgtattatgt atacatgaaa tgcttgtaca aaattgtctt aaaatgttga atcttaatct
     1321 taa
//
LOCUS       XM_071830598            1753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/FBD/LRR-repeat protein
            At1g13570 (LOC139840331), transcript variant X1, mRNA.
ACCESSION   XM_071830598
VERSION     XM_071830598.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1753
                     /gene="LOC139840331"
                     /note="F-box/FBD/LRR-repeat protein At1g13570; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139840331"
     CDS             128..1480
                     /gene="LOC139840331"
                     /codon_start=1
                     /product="F-box/FBD/LRR-repeat protein At1g13570 isoform
                     X1"
                     /protein_id="XP_071686699.1"
                     /db_xref="GeneID:139840331"
                     /translation="MHTELPLGEDYISDLPQSIIEIILTRLPLLDVVRTSILSSKWRY
                     KWATLTQLEFDDKCVLGTHDRSLAETNLAKFVTRFLLLHDGPIHRFTLSTAYLQSSPD
                     VDQWLLFLSRKDVKELVLELGEGEWFRAPSCLYLCKKLVRLELVRCELDPPLSFKGFL
                     YLKHLNLQQVIIAPDAIENLISSCPLLESLTLSYFDSLELTIRAPNLKYLILEGEFKD
                     ICLENTPMLVALSVAMYMTDDIAEHFGQSSSCNFDKFLGAVPSLQRLIGHIYFTKVKS
                     FCYFSLLFVDFVNGFSNYSFLQYMSIGNTLTKTQITYRQLKVIELYQVSFEDMKEIMV
                     VLRLILNAPNLQELQISGSSNSSSATEASDLDFWENECPRDCTFERLKIVKMTDMSGV
                     PHEMGFIEFLLGNSPVLEIMSITPSVYVTDGSINLLIELLKFKRASAEAKILFVPEQV
                     "
     misc_feature    161..268
                     /gene="LOC139840331"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; Region: F-box_AtFBL13-like; cd22160"
                     /db_xref="CDD:438931"
     misc_feature    order(170..172,182..184,191..196,203..208,218..220,
                     224..229,239..247,251..253)
                     /gene="LOC139840331"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438931"
     misc_feature    545..610
                     /gene="LOC139840331"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    611..685
                     /gene="LOC139840331"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    812..910
                     /gene="LOC139840331"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    1268..1462
                     /gene="LOC139840331"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; Region: FBD; smart00579"
                     /db_xref="CDD:214730"
ORIGIN      
        1 aaaattgtga aagcggtaga atttggcatc ttttgatgct ttcttccttc atttccttca
       61 ctaccctctc atatcagaaa ccgtggagga tcatcagtct ttatcttatt agggtacaag
      121 ggacaaaatg catacagaac ttcccttagg ggaagactat ataagcgatc tccctcaaag
      181 tattatcgaa atcatactca caaggttacc attactagac gtcgtaagaa caagcatatt
      241 atctagtaaa tggaggtata aatgggctac acttacacaa cttgaattcg acgataaatg
      301 tgtgttgggc acacacgata gatcacttgc ggagaccaat ctcgctaaat ttgtcactcg
      361 gttcctttta cttcatgatg gtcctataca tagattcacc ttatctactg cttatttgca
      421 aagctccccc gatgtagatc aatggctgtt gtttttatca cgaaaagatg ttaaagaatt
      481 ggttcttgaa ttaggtgaag gcgaatggtt tagagcacct tcgtgtcttt acttatgtaa
      541 aaaactcgtt cgtttggagc tcgttcgatg tgagttggac ccacctttat cgtttaaagg
      601 gtttttgtat ttaaaacatc ttaatcttca acaagttata atagctcctg atgctattga
      661 aaatcttatc tcgagctgcc cacttcttga aagtttgact ttgtcgtatt ttgatagttt
      721 agagcttact attcgtgccc caaatcttaa gtatttaatt cttgaaggcg aatttaaaga
      781 tatttgtctc gagaatactc ctatgttagt tgctttatcg gttgctatgt acatgactga
      841 tgatatcgct gaacatttcg gccaaagttc gagttgcaat tttgataagt ttcttggcgc
      901 tgtaccatcc cttcaaagac ttatcgggca tatttacttt acaaaggtaa aaagcttttg
      961 ttatttttca cttttgtttg ttgactttgt taacggattc agtaactatt cgtttttaca
     1021 gtatatgagt ataggtaata ccttaacgaa aacacagata acgtatcgac agttgaaggt
     1081 tattgaactt tatcaagtaa gctttgaaga catgaaagaa ataatggtgg ttcttcgttt
     1141 gattttaaat gcccctaatc ttcaagaact tcaaatctcg ggttcatcga attcatcatc
     1201 tgcaacagaa gcttctgatc tggatttttg ggaaaacgaa tgccctcgtg actgcacatt
     1261 tgagcgactt aagatcgtaa agatgacaga tatgtcaggg gtcccacacg aaatgggatt
     1321 tatagagttc ttgcttggaa attctccggt tcttgagatt atgagcatta ctcctagcgt
     1381 gtacgtgacc gacggaagta ttaacttgtt gatcgagtta ttgaagttta aacgagcatc
     1441 tgcagaagct aaaattttat ttgttccaga acaggtgtaa aattctcaca ttcttatgaa
     1501 ttttaacttt tgatgtttac tgcatgaatt tcatataaat aacattgttg tgaaactccc
     1561 taattaatcc tttttaggaa ctgaccgagc cgatttttca gaattcgagt aattaatcgg
     1621 gcaaagtctg tcagtgggtc gaaatcagat ttagttggct aaatctgaat ttaatcggtc
     1681 aaaatcggtc taagtcaata ttggcctaca tttttaatat gaagtaaatt cgaattatgg
     1741 atttttttga ata
//
LOCUS       XM_071830599            1678 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/FBD/LRR-repeat protein
            At1g13570 (LOC139840331), transcript variant X2, mRNA.
ACCESSION   XM_071830599
VERSION     XM_071830599.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1678
                     /gene="LOC139840331"
                     /note="F-box/FBD/LRR-repeat protein At1g13570; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139840331"
     CDS             128..1405
                     /gene="LOC139840331"
                     /codon_start=1
                     /product="F-box/FBD/LRR-repeat protein At1g13570 isoform
                     X2"
                     /protein_id="XP_071686700.1"
                     /db_xref="GeneID:139840331"
                     /translation="MHTELPLGEDYISDLPQSIIEIILTRLPLLDVVRTSILSSKWRY
                     KWATLTQLEFDDKCVLGTHDRSLAETNLAKFVTRFLLLHDGPIHRFTLSTAYLQSSPD
                     VDQWLLFLSRKDVKELVLELGEGEWFRAPSCLYLCKKLVRLELVRCELDPPLSFKGFL
                     YLKHLNLQQVIIAPDAIENLISSCPLLESLTLSYFDSLELTIRAPNLKYLILEGEFKD
                     ICLENTPMLVALSVAMYMTDDIAEHFGQSSSCNFDKFLGAVPSLQRLIGHIYFTKYMS
                     IGNTLTKTQITYRQLKVIELYQVSFEDMKEIMVVLRLILNAPNLQELQISGSSNSSSA
                     TEASDLDFWENECPRDCTFERLKIVKMTDMSGVPHEMGFIEFLLGNSPVLEIMSITPS
                     VYVTDGSINLLIELLKFKRASAEAKILFVPEQV"
     misc_feature    161..268
                     /gene="LOC139840331"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; Region: F-box_AtFBL13-like; cd22160"
                     /db_xref="CDD:438931"
     misc_feature    order(170..172,182..184,191..196,203..208,218..220,
                     224..229,239..247,251..253)
                     /gene="LOC139840331"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438931"
     misc_feature    545..610
                     /gene="LOC139840331"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    611..685
                     /gene="LOC139840331"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    812..910
                     /gene="LOC139840331"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    1193..1387
                     /gene="LOC139840331"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; Region: FBD; smart00579"
                     /db_xref="CDD:214730"
ORIGIN      
        1 aaaattgtga aagcggtaga atttggcatc ttttgatgct ttcttccttc atttccttca
       61 ctaccctctc atatcagaaa ccgtggagga tcatcagtct ttatcttatt agggtacaag
      121 ggacaaaatg catacagaac ttcccttagg ggaagactat ataagcgatc tccctcaaag
      181 tattatcgaa atcatactca caaggttacc attactagac gtcgtaagaa caagcatatt
      241 atctagtaaa tggaggtata aatgggctac acttacacaa cttgaattcg acgataaatg
      301 tgtgttgggc acacacgata gatcacttgc ggagaccaat ctcgctaaat ttgtcactcg
      361 gttcctttta cttcatgatg gtcctataca tagattcacc ttatctactg cttatttgca
      421 aagctccccc gatgtagatc aatggctgtt gtttttatca cgaaaagatg ttaaagaatt
      481 ggttcttgaa ttaggtgaag gcgaatggtt tagagcacct tcgtgtcttt acttatgtaa
      541 aaaactcgtt cgtttggagc tcgttcgatg tgagttggac ccacctttat cgtttaaagg
      601 gtttttgtat ttaaaacatc ttaatcttca acaagttata atagctcctg atgctattga
      661 aaatcttatc tcgagctgcc cacttcttga aagtttgact ttgtcgtatt ttgatagttt
      721 agagcttact attcgtgccc caaatcttaa gtatttaatt cttgaaggcg aatttaaaga
      781 tatttgtctc gagaatactc ctatgttagt tgctttatcg gttgctatgt acatgactga
      841 tgatatcgct gaacatttcg gccaaagttc gagttgcaat tttgataagt ttcttggcgc
      901 tgtaccatcc cttcaaagac ttatcgggca tatttacttt acaaagtata tgagtatagg
      961 taatacctta acgaaaacac agataacgta tcgacagttg aaggttattg aactttatca
     1021 agtaagcttt gaagacatga aagaaataat ggtggttctt cgtttgattt taaatgcccc
     1081 taatcttcaa gaacttcaaa tctcgggttc atcgaattca tcatctgcaa cagaagcttc
     1141 tgatctggat ttttgggaaa acgaatgccc tcgtgactgc acatttgagc gacttaagat
     1201 cgtaaagatg acagatatgt caggggtccc acacgaaatg ggatttatag agttcttgct
     1261 tggaaattct ccggttcttg agattatgag cattactcct agcgtgtacg tgaccgacgg
     1321 aagtattaac ttgttgatcg agttattgaa gtttaaacga gcatctgcag aagctaaaat
     1381 tttatttgtt ccagaacagg tgtaaaattc tcacattctt atgaatttta acttttgatg
     1441 tttactgcat gaatttcata taaataacat tgttgtgaaa ctccctaatt aatccttttt
     1501 aggaactgac cgagccgatt tttcagaatt cgagtaatta atcgggcaaa gtctgtcagt
     1561 gggtcgaaat cagatttagt tggctaaatc tgaatttaat cggtcaaaat cggtctaagt
     1621 caatattggc ctacattttt aatatgaagt aaattcgaat tatggatttt tttgaata
//
LOCUS       XM_071830600             954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            ZAT11-like (LOC139840333), mRNA.
ACCESSION   XM_071830600
VERSION     XM_071830600.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..954
                     /gene="LOC139840333"
                     /note="zinc finger protein ZAT11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840333"
     CDS             168..674
                     /gene="LOC139840333"
                     /codon_start=1
                     /product="zinc finger protein ZAT11-like"
                     /protein_id="XP_071686701.1"
                     /db_xref="GeneID:139840333"
                     /translation="MKRSREAELDSAITNMANCLMLLSKGPSEPYEESPSRVFECKTC
                     NRQFPSFQALGGHRASHKKPRVNNEGDVTHGTNLVPTKAKSHECTICGLEFAIGQALG
                     GHMRRHRASTTNENQPVQKVHSSIDHMVKNVNSRRVFTLDLNLTPLENDLEFRFGKVV
                     PTTIELFI"
     misc_feature    279..359
                     /gene="LOC139840333"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
     misc_feature    423..500
                     /gene="LOC139840333"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
     polyA_site      954
                     /gene="LOC139840333"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataatcaact attacttcat ttttcatcca atccaatctc acattcatac aaaactctac
       61 ttttgttttc acaccaaaaa accctaaaaa tacaagaata aaaatattct aaccttgtta
      121 ttatttgtta atctgcttcg taattaaatt tgattgtgta tctaccgatg aagagatctc
      181 gagaagccga gctagactcg gccataacca acatggctaa ttgtttgatg ctactctcga
      241 agggaccctc cgaaccatac gaagagtcac ctagtcgagt tttcgagtgt aaaacgtgta
      301 atcgtcagtt cccatctttc caagcactag gtggacatag agctagtcac aagaagcctc
      361 gagtcaataa cgaaggtgac gtgacacatg gcacaaattt ggttcctaca aaggccaagt
      421 cacacgagtg cacgatttgt gggctagagt ttgccatagg gcaagcgtta ggcggacata
      481 tgagaaggca tagagcgagt acaacaaacg agaaccaacc ggttcaaaag gttcattcgt
      541 ctattgatca catggttaaa aatgttaata gtcgaagagt ttttactttg gatttaaact
      601 taacaccttt agagaatgat ttggagtttc gatttgggaa ggtggttcca accacaattg
      661 aattatttat atgatgtata tctatgattt atgattgtta tcatatggag taacacaatt
      721 ttttattttt ttccgtacct gtaaattatt aattacgtat ttaagttaca tttatacttt
      781 gagacgaagt gttttattat tttagttaag tagttcatag ttcatacatg atcatgatga
      841 tccatgtgaa tcagttattg cttttaataa tttttgaaag aagatttcaa cttacgtggg
      901 agataatggg cgttgtgttt gggatattat tcatttattt atatttaatc aacg
//
LOCUS       XM_071830601            2230 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840334), mRNA.
ACCESSION   XM_071830601
VERSION     XM_071830601.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2230
                     /gene="LOC139840334"
                     /note="uncharacterized LOC139840334; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840334"
     CDS             49..1485
                     /gene="LOC139840334"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686702.1"
                     /db_xref="GeneID:139840334"
                     /translation="MPMKKLTRPPPLCRPLQPSTTTNLPPPPPPDTSLIAPPTLSLTS
                     PTSTTQSQLTNFINSHLKNNLTANDLLSFLKNHLHHHPKFAHLDLHVFRHAATLDSFR
                     HDHSTYEWMVRTLAITHRLDSLSSVLDFIVSNPCPCSDGIFSCSRTEPIFRFAINSFC
                     NVGRFNDAIHAFHNMRKLVDGKPNTAIYNILIHSFVKYGEFEKGLEFYERMINDRVKP
                     DVVTFNILINGYFRSSRFGLALEVFKEMRVKGCTPNVVTFNTLIKGFFRERKFKEGIG
                     MAYEMIELGCGLSSVTCEILVDGLIKDGRVSEVCDLVLDFSRKRVLPTTFDYFGLIES
                     LCDKGNVVIAKSIVDEIWENGNAPSSITCTILIDGLRKIGNIELAFTLMDKMLKESIV
                     PDSVTFNCVLGDLCNSGRTLEADKLRILGCNKGVCVDEVTYNILVSGYSKEGRKIEGK
                     CIVDEMLDKEFIPDIATYNRLMKGLGIR"
     misc_feature    <514..>1266
                     /gene="LOC139840334"
                     /note="maturation of RBCL 1; Provisional; Region:
                     PLN03218"
                     /db_xref="CDD:215636"
     misc_feature    514..582
                     /gene="LOC139840334"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    607..690
                     /gene="LOC139840334"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    700..849
                     /gene="LOC139840334"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    706..795
                     /gene="LOC139840334"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    811..897
                     /gene="LOC139840334"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1039..1110
                     /gene="LOC139840334"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1132..1215
                     /gene="LOC139840334"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1231..1320
                     /gene="LOC139840334"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1333..1473
                     /gene="LOC139840334"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    1336..1425
                     /gene="LOC139840334"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 aatcaagata agattttggc atgaattgtt gaacaataat cttttgaaat gccgatgaag
       61 aaacttacaa gaccaccacc gctctgccgc cctttacaac catcgaccac caccaacctc
      121 ccaccaccgc caccacccga cacatcactc atcgcaccgc caaccctctc tcttacatcc
      181 cccacctcaa ctactcaatc acaactcacc aatttcatca actctcacct taaaaacaac
      241 cttaccgcta acgacctcct atccttcctc aagaaccacc tccaccacca cccaaaattc
      301 gctcacctcg acctccacgt cttccgccat gccgccaccc tcgactcctt ccgccacgac
      361 cactccacct acgaatggat ggtccgaacg ctcgccatta cgcaccgcct cgactcctta
      421 tcatccgttc tcgatttcat cgtctcaaac ccttgccctt gttccgacgg tatattttct
      481 tgctcacgta ccgaacctat tttccggttc gccatcaact cgttttgtaa cgttggtagg
      541 tttaatgatg ccatccatgc ttttcataat atgcgtaagc tagttgatgg taaaccgaac
      601 accgctatat acaatatatt aattcatagt tttgttaagt atggtgaatt tgaaaagggt
      661 ttggagtttt atgagagaat gattaacgat cgagtaaagc ccgatgtggt cacctttaac
      721 atattgatta atggatactt tcgtagctcg agattcggtt tagctctaga ggtattcaag
      781 gaaatgaggg tcaagggttg tactccaaat gtagtcactt ttaatacttt gatcaaaggg
      841 ttttttagag aaaggaagtt taaagaaggg ataggaatgg catacgagat gatcgaattg
      901 gggtgcggtt tatcgagtgt aacttgtgaa attttggttg atgggcttat taaggatgga
      961 cgtgtatcag aggtttgtga tctcgttctt gatttttcaa gaaaacgagt tttacctaca
     1021 acgtttgact attttggctt aatcgagagc ctttgtgata aaggaaatgt ggtaatagca
     1081 aaatcgatag ttgatgagat atgggagaat ggaaatgctc caagctcgat cacttgtact
     1141 attttgatcg acggtttaag gaagattggg aatattgaat tggcgtttac gttaatggat
     1201 aagatgctta aagaaagtat tgttccggat agtgtgacat ttaactgtgt tcttggtgat
     1261 ttgtgtaatt caggaagaac gttggaagcg gataaattga ggatcttggg ttgtaataaa
     1321 ggtgtatgtg ttgatgaagt aacttataac atattagtat ctggatattc aaaagaaggt
     1381 agaaagattg aggggaagtg tatagtggat gagatgttgg ataaggagtt tatacctgat
     1441 attgctactt ataataggct gatgaaaggt cttggtattc gatgaaactg cctttgatgg
     1501 aaacaagaac aatgctaaaa atatatgcag attctttgtg tcgttaagtg aaattaccga
     1561 acgttgatga taatctaaat tgttgtttac tggatgtatt atgtttactg gatgttgtat
     1621 gtctacatca tcagttggtt ccacatagct actttccccg gattttcaag tatgtcatgc
     1681 cttgggtttt ctccccttgc cttgagtttc ctttctccgg tgtttatttt atatatatct
     1741 tgttgaatca ccacccgatt cggatgtgta agggtcacaa gatcgtgttt cctcgatact
     1801 aggccttgct ccttcgaaac cagatttcgc tattttgtgt ttctaggcgt ttgttaaggt
     1861 ggacgtttaa tgtgttatga agtcttttat gctttcgggt tgtaactgat atcatcataa
     1921 agtcaaaagt tctcgccctt atctgctttt aagttgctgt ctttcctatg acttggaccc
     1981 tttccgtgcc tcctaggaaa ggttcttgct actcgagaaa ttttgtaagt gaagttctcc
     2041 tatcaactta aaaaggactt cctcaggtcg acctttcatt ctgatttgca tttttcaggt
     2101 gattagttta gtacaagatg tgaagatgcg ggatttctat gtcataatag cttatggtgt
     2161 atgttttagt tagtgtttgt tcaatgttga tattaccata atcggtacaa ttgtaacctt
     2221 gttagattat
//
LOCUS       XM_071830604            1372 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein CIA1 (LOC139840335),
            mRNA.
ACCESSION   XM_071830604
VERSION     XM_071830604.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1372
                     /gene="LOC139840335"
                     /note="protein CIA1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:139840335"
     CDS             132..1199
                     /gene="LOC139840335"
                     /codon_start=1
                     /product="protein CIA1"
                     /protein_id="XP_071686705.1"
                     /db_xref="GeneID:139840335"
                     /translation="MTLSLEEQDNLQLKEVQKLEGHTDRVWGLAWNPATGTGRIPTML
                     ASCGGDKSVRIWQQRSPSSTSLESRAVLEENHTRTVRSCAWSPSGDKLATASFDATTA
                     IFEHNGDNFECVSTLEGHENEVKSVSWNASGSLIATCSRDKCVWIWEVMPGNEYDCVA
                     VLQGHTQDVKMVQWHPTVDVLFSCSYDNTIKVWAAEDGDSDDWQCVQTLGESDSGHSS
                     TVWALSFNYSGDKMATCSDDLTVKVWGVDIARMQSGDSNAPWRHLCTLSGYHERTIFS
                     VHWSREGIIATGAADDAICLFVESEDHSYDGPTYKLLLKKEKAHDMDINCVRWSPTEN
                     RILASASDDGTIKIWKLDSIQ"
     misc_feature    174..1181
                     /gene="LOC139840335"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    order(195..197,267..269,279..281,297..299,324..326,
                     354..359,411..413,423..425,441..443,450..452,486..491,
                     540..542,555..557,573..578,624..626,675..677,690..692,
                     708..710,726..728,774..779,831..833,843..845,861..866,
                     933..935,939..941,987..989,1002..1004,1020..1022,
                     1035..1037,1086..1091,1146..1148,1158..1160,1176..1181)
                     /gene="LOC139840335"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    207..353
                     /gene="LOC139840335"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    372..488
                     /gene="LOC139840335"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    501..620
                     /gene="LOC139840335"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    639..770
                     /gene="LOC139840335"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    789..932
                     /gene="LOC139840335"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    951..1082
                     /gene="LOC139840335"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1101..1178
                     /gene="LOC139840335"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     polyA_site      1372
                     /gene="LOC139840335"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttttgcgta ataaagagcg tctataataa aaagctcgct ggtagaccac tcacccgccg
       61 ccacgagctc cgacagctag aaccgccgat caactccgcc tgcagatctc accttttccg
      121 gcaacttaaa catgacttta tcactagaag agcaagataa tttacaactt aaagaagtac
      181 aaaaactaga aggtcacacc gatagggtat ggggtcttgc ttggaatccg gccaccggaa
      241 caggtcgtat tccgaccatg cttgcttctt gcggcggaga taaatctgtt cgtatctggc
      301 aacaacggag cccttcgtct acttcacttg aatccagggc agtattagaa gagaatcata
      361 ctcgaacggt tcgatcatgt gcatggtcac catctggtga caagttagca actgcaagtt
      421 ttgatgccac tacggctatt ttcgaacaca atggtgataa ttttgaatgt gtatccacct
      481 tagagggtca tgaaaatgaa gttaaaagtg tgtcgtggaa tgcatctggt tcactgattg
      541 caacttgtag ccgagataaa tgtgtttgga tatgggaagt tatgcctgga aatgagtatg
      601 attgtgttgc ggtgctacaa ggacatacac aagatgtgaa gatggttcaa tggcatccaa
      661 ctgttgatgt tttattttca tgtagctacg ataacacgat aaaggtttgg gcagcagagg
      721 atggtgatag tgatgattgg cagtgtgttc agactttagg tgaatctgat agtggacact
      781 catctacagt gtgggctcta tcttttaatt attccggaga taaaatggct acgtgcagcg
      841 atgatctcac tgtgaaggtt tggggtgtag acattgcaag aatgcaatct ggtgatagca
      901 atgctccttg gaggcacctg tgcactttat ctggttatca tgaacgaaca atattctcag
      961 tccattggtc gagggaaggt ataatagcta ctggggcagc cgatgatgct atatgcttat
     1021 ttgttgagtc tgaagatcat tcttatgatg gacctacata taaactgctt ctcaagaaag
     1081 aaaaggctca tgacatggac attaattgtg tgcgttggag ccctacggaa aatcggattc
     1141 ttgcttctgc aagtgatgat ggcacaatca agatttggaa gttggattca atacagtaac
     1201 tttatgagat tttgtagcta gttttagttg tttaattcac gcgaagtatt taaataacac
     1261 taaattacag tttataagtg gatttggatg aataatggat atgtaaaggc aaattgtttt
     1321 ttgacattgt tgactttctt tcttaagttt gaaacctggt tttattttat tt
//
LOCUS       XM_071830605            1780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840336), mRNA.
ACCESSION   XM_071830605
VERSION     XM_071830605.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1780
                     /gene="LOC139840336"
                     /note="uncharacterized LOC139840336; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840336"
     CDS             151..1509
                     /gene="LOC139840336"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686706.1"
                     /db_xref="GeneID:139840336"
                     /translation="MRHKKSGIQIGEEEKQAYSDSNSKNPNSKIEILSVSNEQEKNPN
                     FKNSASITNHRLMNYHRKIHHKSLICCSSSEALIATKSLLLKLLNITYVKLFLIKAPS
                     RVLLLLFLPSIYFFSSNHYKSLYLYILFLLSLTVFVLSVLNLASIRLFVANKLPFLTH
                     SKTCPPVVWSIGSKNRHEESTVSGVLVKVYSNGDVYEGEFYKGKCSGSGVYYYNMNGR
                     YEGDWVDQKYDGYGVETWAKGSRYRGQYRQGLRHGYGVYRFYVGDMYSGEWIKGVCHG
                     YGVHTCEDGSKYFGEFKAGVKHGIGHYHFRNGDMYAGEYFADKMHGFGVYNFANGHRY
                     EGAWHEGRRQGFGMYTFRNGDTQSGHWEDGVLSISTGPDTISTQSPMSVSHAKVLEAV
                     QEARRKAEKALGAVNVDDKVNRAVAAANRAANAARVVAIKAVQTRADHYHDDDYPTLV
                     IV"
     misc_feature    <715..1239
                     /gene="LOC139840336"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; Region: COG4642"
                     /db_xref="CDD:443680"
ORIGIN      
        1 tacaaaaaac caccatcgaa acctctctca cacaccaaca gctaaatcaa tcgaattcaa
       61 atacacacaa aatcaatttt agggttttca tcatcgattt tcgaactaat aaacctaaat
      121 catattacta ttaattcgcg ttcgcaacta atgcggcata aaaaatcagg cattcagatc
      181 ggagaagaag aaaaacaagc ttattctgat tctaattcta aaaaccctaa ttccaaaatc
      241 gaaatcctat cagtttctaa tgaacaggaa aaaaacccta attttaagaa tagcgcatca
      301 attacaaatc acaggctcat gaattaccac cggaaaattc atcacaaatc tttaatttgt
      361 tgttcatctt cagaagccct aatagctaca aaatcacttc tgctaaaact gttaaatatc
      421 acatatgtaa agcttttttt gatcaaagct ccttctaggg ttttactcct tttattttta
      481 ccatcaattt actttttttc atcaaaccat tataaatctc tgtacctata catactgttt
      541 ttactatccc ttactgtatt tgtactatct gtattaaatc ttgcatcaat taggctattt
      601 gttgcaaaca agttgccttt tttgacccat tctaaaacat gcccaccagt tgtttggtca
      661 attgggtcaa agaatagaca tgaggaaagt actgtatcag gtgttttggt gaaggtgtat
      721 agtaatgggg atgtatatga gggtgagttt tataaaggaa agtgttcagg aagtggggtg
      781 tattattata acatgaatgg tagatatgaa ggtgattggg ttgatcaaaa gtatgatgga
      841 tatggtgttg aaacatgggc taaagggagt aggtacagag ggcaatatag acaaggattg
      901 agacatgggt atggtgtgta tagattctat gttggggata tgtattcagg tgaatggatt
      961 aagggtgtgt gtcatggtta tggtgttcat acttgtgaag atggtagtaa gtattttggg
     1021 gagttcaaag ctggtgttaa acatggaatt ggtcattatc atttcagaaa cggagacatg
     1081 tatgcagggg agtattttgc ggacaagatg cacggttttg gtgtctacaa ttttgcaaac
     1141 ggacatcgat acgaaggtgc atggcatgaa ggaagaagac aagggttcgg tatgtacact
     1201 ttcagaaacg gtgacactca atctggacac tgggaagacg gtgttctaag catctcaacg
     1261 ggtcccgata caatctctac acaatctcca atgtccgttt ctcatgctaa agttcttgaa
     1321 gcagttcaag aagcaaggcg taaagctgaa aaagcacttg gtgcagttaa tgtggatgac
     1381 aaggtaaata gggcggtggc tgcagctaac agggcggcca atgcagcaag agtggtggca
     1441 attaaggcgg tccagacccg tgcagaccac taccatgatg atgattatcc gacattggtt
     1501 attgtttgac ttgtttatcg attcgtttgg gtattgggtt tagtagttga ggagcaaata
     1561 gggtttggtt actgtttttg ttcatgagat aactgtgtaa ggattaggtt taaaaatgag
     1621 aaggcactaa agtgctttga tggattaggt ttaggtttaa ggtttaggct gcctattttc
     1681 ttccttgttc tgtaactgaa actgtaattg taaatatatc ttagtccaag gtagtagttg
     1741 tatgtttggt tttggcttct gatctacttt tgtgttggta
//
LOCUS       XR_011757344            2822 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X1, ncRNA.
ACCESSION   XR_011757344
VERSION     XR_011757344.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2822
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2822
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggtga
      481 cattcagatt agttacttct atgtgtattg attttttttt taagtcaaat tattgattgc
      541 acaccaagtg tttgattaaa tgcctgaatg aataaagaaa aaagcttcaa gggtattgtc
      601 cttatatcat tatgctggta tgaaattgtg atctaaagtc attgtgatag gggttgtaca
      661 aaggttttgc caacaatgta gcaggttagt tttcaaaagt ttagccaact tccaaacttt
      721 ctcaactcta cataacatga gataactacc atttacggta ttttgtgtca accttttaac
      781 tctttggacc agatttcatt tgtttaatga atttgatgat ggaataagga gttgccgtaa
      841 tcagctcgca aaccataaac agcgtagaag gaaaccttat ggtagcactt tgataatttt
      901 aaaagcaaaa gcggttgaca aactcaaatg aaccgtgccc ttgcagccct ttaaaacaat
      961 tatctaaaac taatcaactt tttgaagctt atcataacct tacaaagtca acatgacttt
     1021 aattcaattt tgtaatcgat aatgaataaa ctgtttatat ttttatatct aatcttgcta
     1081 ttataaattt aggagatctt tatttacaaa actaatatat ttatatatcc actataacgg
     1141 aatccactac gaatatatat gtatatgttt accaaaataa gctacaatca ggcaacggtt
     1201 aatgataaga atatcgacaa ccctgtgcag tatataggtt tatatagtta gcatataata
     1261 ggaactccat tgtcagtcaa tcactcagga cccatctatt ttttctgttt atgtaatcac
     1321 tttgtaagtt aatgggttaa aatagaaccc tttgtattaa tgtgaaatga ttcttattct
     1381 attgagttaa ttttttttta tcaggcaaaa ctctatgttg gaaaaggcat gcacgaagac
     1441 gtcttatctc ttcaaaagtg aacattgttt tggatatttc tgtgatcact acatatatta
     1501 ccattggtca tgcccacaaa gttactcatg gaaatgtctg atagtagctg gtgtactgac
     1561 acgagttctt tcctaatggt aatatcgtat atattaatct aaagtttgat taatgtatat
     1621 ttatttgagg gttttttagt gacacacaat atcggtggtg ttattgttat ttgggctcca
     1681 atagtcatgg tctatttctt ggacatacaa atttggtatt caatataggc tattatcatc
     1741 agttgaatct atggtgcgtt tagccacttg attgaggaat ttgtgcatag tcttggcgct
     1801 actcgattgc aatcttagat cacatcattg ctgctattca atcacatcca gtacgagtgc
     1861 ctgatcgcac ctctgctgtg ggcgcaagta cagcctgtac aagttccaga ttttagcatt
     1921 attgcatgcc tgattgcatc catgtgtgtt ttgatcttag ccctgctgct tgcctgattg
     1981 cagccctgtt gcaggctaat catgactgat tgcagccatt gcatgttttg gtgataagtt
     2041 gaaattggaa cgatagtgtg cctaaaagat ccatgcatcc atctgcatat acatttgtgc
     2101 ttaagtgagt gtagacatgg ttttcaatcg tgattgctcg acacaggttt accaggttag
     2161 agcaaaagac gttatatcgg tcgtggacgt ggtatcaata aattattgcc catcaaagct
     2221 caattttggt gtatggcaaa ctcgcaaagt cccgagggaa gtcatgcgga gaagtggtgg
     2281 tttgacatga ttagaagaac catgaatgaa ggcacatgtt gtcaccatgt tggctacgta
     2341 cacaaataat agcatgccta tcgaccaaaa gagggtagga atgtgagatt cgagtgaaaa
     2401 atgcatgcta cttcatgatc tttatcgata atcttcagtt tcttccattt tgtagtaact
     2461 ttcgccatcc agtttgaact tcttcaaaag caacagatta tcaaataatg agcaagtcac
     2521 gtggtgcata tcatcacatt cattgatctc acaaagactc ctcccgaacc cgacgagttc
     2581 acagttccat actacactat ccaccactct gttaaccaca cattgctcgc aaaataccgc
     2641 aacaccgaag tctacacacc tcacaagatc caccaatagc aaaaggaacg actcagaaca
     2701 accagagtag atttccaaga aaaaggacta aagaacaagg aaaccatatg ctttcctttt
     2761 aaactatgac aactttctct ttgaacaatg caagtgtaaa aacgttaaca acaaatttac
     2821 aa
//
LOCUS       XR_011757345            2712 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X2, ncRNA.
ACCESSION   XR_011757345
VERSION     XR_011757345.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2712
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2712
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggtga
      481 cattcagatt agttacttct atgtgtattg attttttttt taagtcaaat tattgattgc
      541 acaccaagtg tttgattaaa tgcctgaatg aataaagaaa aaagcttcaa gggtattgtc
      601 cttatatcat tatgctggta tgaaattgtg atctaaagtc attgtgatag gggttgtaca
      661 aaggttttgc caacaatgta gcaggttagt tttcaaaagt ttagccaact tccaaacttt
      721 ctcaactcta cataacatga gataactacc atttacggta ttttgtgtca accttttaac
      781 tctttggacc agatttcatt tgtttaatga atttgatgat ggaataagga gttgccgtaa
      841 tcagctcgca aaccataaac agcgtagaag gaaaccttat ggtagcactt tgataatttt
      901 aaaagcaaaa gcggttgaca aactcaaatg aaccgtgccc ttgcagccct ttaaaacaat
      961 tatctaaaac taatcaactt tttgaagctt atcataacct tacaaagtca acatgacttt
     1021 aattcaattt tgtaatcgat aatgaataaa ctgtttatat ttttatatct aatcttgcta
     1081 ttataaattt aggagatctt tatttacaaa actaatatat ttatatatcc actataacgg
     1141 aatccactac gaatatatat gtatatgttt accaaaataa gctacaatca ggcaacggtt
     1201 aatgataaga atatcgacaa ccctgtgcag tatataggtt tatatagtta gcatataata
     1261 ggaactccat tgtcagtcaa tcactcagga cccatctatt ttttctgttt atgtaatcac
     1321 tttgtaagtt aatgggttaa aatagaaccc tttgtattaa tgtgaaatga ttcttattct
     1381 attgagttaa ttttttttta tcaggcaaaa ctctatgttg gaaaaggcat gcacgaagac
     1441 gtcttatctc ttcaaaagtg aacattgttt tggatatttc tgtgatcact acatatatta
     1501 ccattggtca tgcccacaaa gttactcatg gaaatgtctg atagtagctg gtgtactgac
     1561 acgagttctt tcctaatggt aatatcgtat atattaatct aaagtttgat taatgtatat
     1621 ttatttgagg gttttttagt gacacacaat atcggtggtg ttattgttat ttgggctcca
     1681 atagtcatgg tctatttctt ggacatacaa atttggtatt caatataggc tattatcatc
     1741 agttgaatct atggtgcgtt tagccacttg attgaggaat ttgtgcatag tcttggcgct
     1801 actcgattgc aatcttagat cacatcattg ctgctattca atcacatcca ccctgctgct
     1861 tgcctgattg cagccctgtt gcaggctaat catgactgat tgcagccatt gcatgttttg
     1921 gtgataagtt gaaattggaa cgatagtgtg cctaaaagat ccatgcatcc atctgcatat
     1981 acatttgtgc ttaagtgagt gtagacatgg ttttcaatcg tgattgctcg acacaggttt
     2041 accaggttag agcaaaagac gttatatcgg tcgtggacgt ggtatcaata aattattgcc
     2101 catcaaagct caattttggt gtatggcaaa ctcgcaaagt cccgagggaa gtcatgcgga
     2161 gaagtggtgg tttgacatga ttagaagaac catgaatgaa ggcacatgtt gtcaccatgt
     2221 tggctacgta cacaaataat agcatgccta tcgaccaaaa gagggtagga atgtgagatt
     2281 cgagtgaaaa atgcatgcta cttcatgatc tttatcgata atcttcagtt tcttccattt
     2341 tgtagtaact ttcgccatcc agtttgaact tcttcaaaag caacagatta tcaaataatg
     2401 agcaagtcac gtggtgcata tcatcacatt cattgatctc acaaagactc ctcccgaacc
     2461 cgacgagttc acagttccat actacactat ccaccactct gttaaccaca cattgctcgc
     2521 aaaataccgc aacaccgaag tctacacacc tcacaagatc caccaatagc aaaaggaacg
     2581 actcagaaca accagagtag atttccaaga aaaaggacta aagaacaagg aaaccatatg
     2641 ctttcctttt aaactatgac aactttctct ttgaacaatg caagtgtaaa aacgttaaca
     2701 acaaatttac aa
//
LOCUS       XR_011757346            2739 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X3, ncRNA.
ACCESSION   XR_011757346
VERSION     XR_011757346.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2739
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2739
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggtga
      481 cattcagatt agttacttct atgtgtattg attttttttt taagtcaaat tattgattgc
      541 acaccaagtg tttgattaaa tgcctgaatg aataaagaaa aaagcttcaa gggtattgtc
      601 cttatatcat tatgctggta tgaaattgtg atctaaagtc attgtgatag gggttgtaca
      661 aaggttttgc caacaatgta gcaggttagt tttcaaaagt ttagccaact tccaaacttt
      721 ctcaactcta cataacatga gataactacc atttacggta ttttgtgtca accttttaac
      781 tctttggacc agatttcatt tgtttaatga atttgatgat ggaataagga gttgccgtaa
      841 tcagctcgca aaccataaac agcgtagaag gaaaccttat ggtagcactt tgataatttt
      901 aaaagcaaaa gcggttgaca aactcaaatg aaccgtgccc ttgcagccct ttaaaacaat
      961 tatctaaaac taatcaactt tttgaagctt atcataacct tacaaagtca acatgacttt
     1021 aattcaattt tgtaatcgat aatgaataaa ctgtttatat ttttatatct aatcttgcta
     1081 ttataaattt aggagatctt tatttacaaa actaatatat ttatatatcc actataacgg
     1141 aatccactac gaatatatat gtatatgttt accaaaataa gctacaatca ggcaacggtt
     1201 aatgataaga atatcgacaa ccctgtgcag tatataggtt tatatagtta gcatataata
     1261 ggaactccat tgtcagtcaa tcactcagga cccatctatt ttttctgttt atgtaatcac
     1321 tttgtaagtt aatgggttaa aatagaaccc tttgtattaa tgtgaaatga ttcttattct
     1381 attgagttaa ttttttttta tcaggcaaaa ctctatgttg gaaaaggcat gcacgaagac
     1441 gtcttatctc ttcaaaagtg aacattgttt tggatatttc tgtgatcact acatatatta
     1501 ccattggtca tgcccacaaa gttactcatg gaaatgtctg atagtagctg gtgtactgac
     1561 acgagttctt tcctaatggt aatatcgtat atattaatct aaagtttgat taatgtatat
     1621 ttatttgagg gttttttagt gacacacaat atcggtggtg ttattgttat ttgggctcca
     1681 atagtcatgg tctatttctt ggacatacaa atttggtatt caatataggc tattatcatc
     1741 agttgaatct atggtgcgtt tagccacttg attgaggaat ttgtgcatag tcttggcgct
     1801 actcgattgc aatcttagat cacatcattg ctgctattca atcacatcca gtacgagtgc
     1861 ctgatcgcac ctctgctccc tgctgcttgc ctgattgcag ccctgttgca ggctaatcat
     1921 gactgattgc agccattgca tgttttggtg ataagttgaa attggaacga tagtgtgcct
     1981 aaaagatcca tgcatccatc tgcatataca tttgtgctta agtgagtgta gacatggttt
     2041 tcaatcgtga ttgctcgaca caggtttacc aggttagagc aaaagacgtt atatcggtcg
     2101 tggacgtggt atcaataaat tattgcccat caaagctcaa ttttggtgta tggcaaactc
     2161 gcaaagtccc gagggaagtc atgcggagaa gtggtggttt gacatgatta gaagaaccat
     2221 gaatgaaggc acatgttgtc accatgttgg ctacgtacac aaataatagc atgcctatcg
     2281 accaaaagag ggtaggaatg tgagattcga gtgaaaaatg catgctactt catgatcttt
     2341 atcgataatc ttcagtttct tccattttgt agtaactttc gccatccagt ttgaacttct
     2401 tcaaaagcaa cagattatca aataatgagc aagtcacgtg gtgcatatca tcacattcat
     2461 tgatctcaca aagactcctc ccgaacccga cgagttcaca gttccatact acactatcca
     2521 ccactctgtt aaccacacat tgctcgcaaa ataccgcaac accgaagtct acacacctca
     2581 caagatccac caatagcaaa aggaacgact cagaacaacc agagtagatt tccaagaaaa
     2641 aggactaaag aacaaggaaa ccatatgctt tccttttaaa ctatgacaac tttctctttg
     2701 aacaatgcaa gtgtaaaaac gttaacaaca aatttacaa
//
LOCUS       XR_011757347            1894 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X4, ncRNA.
ACCESSION   XR_011757347
VERSION     XR_011757347.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1894
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..1894
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggcaa
      481 aactctatgt tggaaaaggc atgcacgaag acgtcttatc tcttcaaaag tgaacattgt
      541 tttggatatt tctgtgatca ctacatatat taccattggt catgcccaca aagttactca
      601 tggaaatgtc tgatagtagc tggtgtactg acacgagttc tttcctaatg gtaatatcgt
      661 atatattaat ctaaagtttg attaatgtat atttatttga gggtttttta gtgacacaca
      721 atatcggtgg tgttattgtt atttgggctc caatagtcat ggtctatttc ttggacatac
      781 aaatttggta ttcaatatag gctattatca tcagttgaat ctatggtgcg tttagccact
      841 tgattgagga atttgtgcat agtcttggcg ctactcgatt gcaatcttag atcacatcat
      901 tgctgctatt caatcacatc cagtacgagt gcctgatcgc acctctgctg tgggcgcaag
      961 tacagcctgt acaagttcca gattttagca ttattgcatg cctgattgca tccatgtgtg
     1021 ttttgatctt agccctgctg cttgcctgat tgcagccctg ttgcaggcta atcatgactg
     1081 attgcagcca ttgcatgttt tggtgataag ttgaaattgg aacgatagtg tgcctaaaag
     1141 atccatgcat ccatctgcat atacatttgt gcttaagtga gtgtagacat ggttttcaat
     1201 cgtgattgct cgacacaggt ttaccaggtt agagcaaaag acgttatatc ggtcgtggac
     1261 gtggtatcaa taaattattg cccatcaaag ctcaattttg gtgtatggca aactcgcaaa
     1321 gtcccgaggg aagtcatgcg gagaagtggt ggtttgacat gattagaaga accatgaatg
     1381 aaggcacatg ttgtcaccat gttggctacg tacacaaata atagcatgcc tatcgaccaa
     1441 aagagggtag gaatgtgaga ttcgagtgaa aaatgcatgc tacttcatga tctttatcga
     1501 taatcttcag tttcttccat tttgtagtaa ctttcgccat ccagtttgaa cttcttcaaa
     1561 agcaacagat tatcaaataa tgagcaagtc acgtggtgca tatcatcaca ttcattgatc
     1621 tcacaaagac tcctcccgaa cccgacgagt tcacagttcc atactacact atccaccact
     1681 ctgttaacca cacattgctc gcaaaatacc gcaacaccga agtctacaca cctcacaaga
     1741 tccaccaata gcaaaaggaa cgactcagaa caaccagagt agatttccaa gaaaaaggac
     1801 taaagaacaa ggaaaccata tgctttcctt ttaaactatg acaactttct ctttgaacaa
     1861 tgcaagtgta aaaacgttaa caacaaattt acaa
//
LOCUS       XR_011757348            2689 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X5, ncRNA.
ACCESSION   XR_011757348
VERSION     XR_011757348.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2689
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2689
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggtga
      481 cattcagatt agttacttct atgtgtattg attttttttt taagtcaaat tattgattgc
      541 acaccaagtg tttgattaaa tgcctgaatg aataaagaaa aaagcttcaa gggtattgtc
      601 cttatatcat tatgctggta tgaaattgtg atctaaagtc attgtgatag gggttgtaca
      661 aaggttttgc caacaatgta gcaggttagt tttcaaaagt ttagccaact tccaaacttt
      721 ctcaactcta cataacatga gataactacc atttacggta ttttgtgtca accttttaac
      781 tctttggacc agatttcatt tgtttaatga atttgatgat ggaataagga gttgccgtaa
      841 tcagctcgca aaccataaac agcgtagaag gaaaccttat ggtagcactt tgataatttt
      901 aaaagcaaaa gcggttgaca aactcaaatg aaccgtgccc ttgcagccct ttaaaacaat
      961 tatctaaaac taatcaactt tttgaagctt atcataacct tacaaagtca acatgacttt
     1021 aattcaattt tgtaatcgat aatgaataaa ctgtttatat ttttatatct aatcttgcta
     1081 ttataaattt aggagatctt tatttacaaa actaatatat ttatatatcc actataacgg
     1141 aatccactac gaatatatat gtatatgttt accaaaataa gctacaatca ggcaacggtt
     1201 aatgataaga atatcgacaa ccctgtgcag tatataggtt tatatagtta gcatataata
     1261 ggaactccat tgtcagtcaa tcactcagga cccatctatt ttttctgttt atgtaatcac
     1321 tttgtaagtt aatgggttaa aatagaaccc tttgtattaa tgtgaaatga ttcttattct
     1381 attgagttaa ttttttttta tcaggcaaaa ctctatgttg gaaaaggcat gcacgaagac
     1441 gtcttatctc ttcaaaagtg aacattgttt tggatatttc tgtgatcact acatatatta
     1501 ccattggtca tgcccacaaa gttactcatg gaaatgtctg atagtagctg gtgtactgac
     1561 acgagttctt tcctaatggt aatatcgtat atattaatct aaagtttgat taatgtatat
     1621 ttatttgagg gttttttagt gacacacaat atcggtggtg ttattgttat ttgggctcca
     1681 atagtcatgg tctatttctt ggacatacaa atttggtatt caatataggc tattatcatc
     1741 agttgaatct atggtgcgtt tagccacttg attgaggaat ttgtgcatag tcttggcgct
     1801 actcgattgc aatcttagat cacatcattg ctgctattca atcacatcca ccctgttgca
     1861 ggctaatcat gactgattgc agccattgca tgttttggtg ataagttgaa attggaacga
     1921 tagtgtgcct aaaagatcca tgcatccatc tgcatataca tttgtgctta agtgagtgta
     1981 gacatggttt tcaatcgtga ttgctcgaca caggtttacc aggttagagc aaaagacgtt
     2041 atatcggtcg tggacgtggt atcaataaat tattgcccat caaagctcaa ttttggtgta
     2101 tggcaaactc gcaaagtccc gagggaagtc atgcggagaa gtggtggttt gacatgatta
     2161 gaagaaccat gaatgaaggc acatgttgtc accatgttgg ctacgtacac aaataatagc
     2221 atgcctatcg accaaaagag ggtaggaatg tgagattcga gtgaaaaatg catgctactt
     2281 catgatcttt atcgataatc ttcagtttct tccattttgt agtaactttc gccatccagt
     2341 ttgaacttct tcaaaagcaa cagattatca aataatgagc aagtcacgtg gtgcatatca
     2401 tcacattcat tgatctcaca aagactcctc ccgaacccga cgagttcaca gttccatact
     2461 acactatcca ccactctgtt aaccacacat tgctcgcaaa ataccgcaac accgaagtct
     2521 acacacctca caagatccac caatagcaaa aggaacgact cagaacaacc agagtagatt
     2581 tccaagaaaa aggactaaag aacaaggaaa ccatatgctt tccttttaaa ctatgacaac
     2641 tttctctttg aacaatgcaa gtgtaaaaac gttaacaaca aatttacaa
//
LOCUS       XR_011757349            2684 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X6, ncRNA.
ACCESSION   XR_011757349
VERSION     XR_011757349.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2684
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2684
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacagggttc ttatggtgca atcgatttga gtcctcaaga ttcgacagat
      241 ggttgtctga ctgctgaaaa aggacagaaa ctgatcaaag ctgagttaat ttagatttcg
      301 gttcactagc tctgaacaag catgaaggat acattaaggt gacattcaga ttagttactt
      361 ctatgtgtat tgattttttt tttaagtcaa attattgatt gcacaccaag tgtttgatta
      421 aatgcctgaa tgaataaaga aaaaagcttc aagggtattg tccttatatc attatgctgg
      481 tatgaaattg tgatctaaag tcattgtgat aggggttgta caaaggtttt gccaacaatg
      541 tagcaggtta gttttcaaaa gtttagccaa cttccaaact ttctcaactc tacataacat
      601 gagataacta ccatttacgg tattttgtgt caacctttta actctttgga ccagatttca
      661 tttgtttaat gaatttgatg atggaataag gagttgccgt aatcagctcg caaaccataa
      721 acagcgtaga aggaaacctt atggtagcac tttgataatt ttaaaagcaa aagcggttga
      781 caaactcaaa tgaaccgtgc ccttgcagcc ctttaaaaca attatctaaa actaatcaac
      841 tttttgaagc ttatcataac cttacaaagt caacatgact ttaattcaat tttgtaatcg
      901 ataatgaata aactgtttat atttttatat ctaatcttgc tattataaat ttaggagatc
      961 tttatttaca aaactaatat atttatatat ccactataac ggaatccact acgaatatat
     1021 atgtatatgt ttaccaaaat aagctacaat caggcaacgg ttaatgataa gaatatcgac
     1081 aaccctgtgc agtatatagg tttatatagt tagcatataa taggaactcc attgtcagtc
     1141 aatcactcag gacccatcta ttttttctgt ttatgtaatc actttgtaag ttaatgggtt
     1201 aaaatagaac cctttgtatt aatgtgaaat gattcttatt ctattgagtt aatttttttt
     1261 tatcaggcaa aactctatgt tggaaaaggc atgcacgaag acgtcttatc tcttcaaaag
     1321 tgaacattgt tttggatatt tctgtgatca ctacatatat taccattggt catgcccaca
     1381 aagttactca tggaaatgtc tgatagtagc tggtgtactg acacgagttc tttcctaatg
     1441 gtaatatcgt atatattaat ctaaagtttg attaatgtat atttatttga gggtttttta
     1501 gtgacacaca atatcggtgg tgttattgtt atttgggctc caatagtcat ggtctatttc
     1561 ttggacatac aaatttggta ttcaatatag gctattatca tcagttgaat ctatggtgcg
     1621 tttagccact tgattgagga atttgtgcat agtcttggcg ctactcgatt gcaatcttag
     1681 atcacatcat tgctgctatt caatcacatc cagtacgagt gcctgatcgc acctctgctg
     1741 tgggcgcaag tacagcctgt acaagttcca gattttagca ttattgcatg cctgattgca
     1801 tccatgtgtg ttttgatctt agccctgctg cttgcctgat tgcagccctg ttgcaggcta
     1861 atcatgactg attgcagcca ttgcatgttt tggtgataag ttgaaattgg aacgatagtg
     1921 tgcctaaaag atccatgcat ccatctgcat atacatttgt gcttaagtga gtgtagacat
     1981 ggttttcaat cgtgattgct cgacacaggt ttaccaggtt agagcaaaag acgttatatc
     2041 ggtcgtggac gtggtatcaa taaattattg cccatcaaag ctcaattttg gtgtatggca
     2101 aactcgcaaa gtcccgaggg aagtcatgcg gagaagtggt ggtttgacat gattagaaga
     2161 accatgaatg aaggcacatg ttgtcaccat gttggctacg tacacaaata atagcatgcc
     2221 tatcgaccaa aagagggtag gaatgtgaga ttcgagtgaa aaatgcatgc tacttcatga
     2281 tctttatcga taatcttcag tttcttccat tttgtagtaa ctttcgccat ccagtttgaa
     2341 cttcttcaaa agcaacagat tatcaaataa tgagcaagtc acgtggtgca tatcatcaca
     2401 ttcattgatc tcacaaagac tcctcccgaa cccgacgagt tcacagttcc atactacact
     2461 atccaccact ctgttaacca cacattgctc gcaaaatacc gcaacaccga agtctacaca
     2521 cctcacaaga tccaccaata gcaaaaggaa cgactcagaa caaccagagt agatttccaa
     2581 gaaaaaggac taaagaacaa ggaaaccata tgctttcctt ttaaactatg acaactttct
     2641 ctttgaacaa tgcaagtgta aaaacgttaa caacaaattt acaa
//
LOCUS       XR_011757350            2102 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X7, ncRNA.
ACCESSION   XR_011757350
VERSION     XR_011757350.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2102
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2102
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X7"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggtga
      481 cattcagatt agttacttct atgtgtattg attttttttt taagtcaaat tattgattgc
      541 acaccaagtg tttgattaaa tgcctgaatg aataaagaaa aaagcttcaa gggtattgtc
      601 cttatatcat tatgctggta tgaaattgtg atctaaagtc attgtgatag gggttgtaca
      661 aaggttttgc caacaatgta gcaggcaaaa ctctatgttg gaaaaggcat gcacgaagac
      721 gtcttatctc ttcaaaagtg aacattgttt tggatatttc tgtgatcact acatatatta
      781 ccattggtca tgcccacaaa gttactcatg gaaatgtctg atagtagctg gtgtactgac
      841 acgagttctt tcctaatggt aatatcgtat atattaatct aaagtttgat taatgtatat
      901 ttatttgagg gttttttagt gacacacaat atcggtggtg ttattgttat ttgggctcca
      961 atagtcatgg tctatttctt ggacatacaa atttggtatt caatataggc tattatcatc
     1021 agttgaatct atggtgcgtt tagccacttg attgaggaat ttgtgcatag tcttggcgct
     1081 actcgattgc aatcttagat cacatcattg ctgctattca atcacatcca gtacgagtgc
     1141 ctgatcgcac ctctgctgtg ggcgcaagta cagcctgtac aagttccaga ttttagcatt
     1201 attgcatgcc tgattgcatc catgtgtgtt ttgatcttag ccctgctgct tgcctgattg
     1261 cagccctgtt gcaggctaat catgactgat tgcagccatt gcatgttttg gtgataagtt
     1321 gaaattggaa cgatagtgtg cctaaaagat ccatgcatcc atctgcatat acatttgtgc
     1381 ttaagtgagt gtagacatgg ttttcaatcg tgattgctcg acacaggttt accaggttag
     1441 agcaaaagac gttatatcgg tcgtggacgt ggtatcaata aattattgcc catcaaagct
     1501 caattttggt gtatggcaaa ctcgcaaagt cccgagggaa gtcatgcgga gaagtggtgg
     1561 tttgacatga ttagaagaac catgaatgaa ggcacatgtt gtcaccatgt tggctacgta
     1621 cacaaataat agcatgccta tcgaccaaaa gagggtagga atgtgagatt cgagtgaaaa
     1681 atgcatgcta cttcatgatc tttatcgata atcttcagtt tcttccattt tgtagtaact
     1741 ttcgccatcc agtttgaact tcttcaaaag caacagatta tcaaataatg agcaagtcac
     1801 gtggtgcata tcatcacatt cattgatctc acaaagactc ctcccgaacc cgacgagttc
     1861 acagttccat actacactat ccaccactct gttaaccaca cattgctcgc aaaataccgc
     1921 aacaccgaag tctacacacc tcacaagatc caccaatagc aaaaggaacg actcagaaca
     1981 accagagtag atttccaaga aaaaggacta aagaacaagg aaaccatatg ctttcctttt
     2041 aaactatgac aactttctct ttgaacaatg caagtgtaaa aacgttaaca acaaatttac
     2101 aa
//
LOCUS       XR_011757351            2615 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X8, ncRNA.
ACCESSION   XR_011757351
VERSION     XR_011757351.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2615
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2615
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X8"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggtga
      481 cattcagatt agttacttct atgtgtattg attttttttt taagtcaaat tattgattgc
      541 acaccaagtg tttgattaaa tgcctgaatg aataaagaaa aaagcttcaa gggtattgtc
      601 cttatatcat tatgctggta tgaaattgtg atctaaagtc attgtgatag gggttgtaca
      661 aaggttttgc caacaatgta gcaggttagt tttcaaaagt ttagccaact tccaaacttt
      721 ctcaactcta cataacatga gataactacc atttacggta ttttgtgtca accttttaac
      781 tctttggacc agatttcatt tgtttaatga atttgatgat ggaataagga gttgccgtaa
      841 tcagctcgca aaccataaac agcgtagaag gaaaccttat ggtagcactt tgataatttt
      901 aaaagcaaaa gcggttgaca aactcaaatg aaccgtgccc ttgcagccct ttaaaacaat
      961 tatctaaaac taatcaactt tttgaagctt atcataacct tacaaagtca acatgacttt
     1021 aattcaattt tgtaatcgat aatgaataaa ctgtttatat ttttatatct aatcttgcta
     1081 ttataaattt aggagatctt tatttacaaa actaatatat ttatatatcc actataacgg
     1141 aatccactac gaatatatat gtatatgttt accaaaataa gctacaatca ggcaacggtt
     1201 aatgataaga atatcgacaa ccctgtgcag tatataggtt tatatagtta gcatataata
     1261 ggaactccat tgtcagtcaa tcactcagga cccatctatt ttttctgttt atgtaatcac
     1321 tttgtaagtt aatgggttaa aatagaaccc tttgtattaa tgtgaaatga ttcttattct
     1381 attgagttaa ttttttttta tcaggcaaaa ctctatgttg gaaaaggcat gcacgaagac
     1441 gtcttatctc ttcaaaagtg aacattgttt tggatatttc tgtgatcact acatatatta
     1501 ccattggtca tgcccacaaa gttactcatg gaaatgtctg atagtagctg gtgtactgac
     1561 acgagttctt tcctaatggt aatatcgtat atattaatct aaagtttgat taatgtatat
     1621 ttatttgagg gttttttagt gacacacaat atcggtggtg ttattgttat ttgggctcca
     1681 atagtcatgg tctatttctt ggacatacaa atttggtatt caatataggc tattatcatc
     1741 agttgaatct atggtgcgtt tagccacttg attgagccct gttgcaggct aatcatgact
     1801 gattgcagcc attgcatgtt ttggtgataa gttgaaattg gaacgatagt gtgcctaaaa
     1861 gatccatgca tccatctgca tatacatttg tgcttaagtg agtgtagaca tggttttcaa
     1921 tcgtgattgc tcgacacagg tttaccaggt tagagcaaaa gacgttatat cggtcgtgga
     1981 cgtggtatca ataaattatt gcccatcaaa gctcaatttt ggtgtatggc aaactcgcaa
     2041 agtcccgagg gaagtcatgc ggagaagtgg tggtttgaca tgattagaag aaccatgaat
     2101 gaaggcacat gttgtcacca tgttggctac gtacacaaat aatagcatgc ctatcgacca
     2161 aaagagggta ggaatgtgag attcgagtga aaaatgcatg ctacttcatg atctttatcg
     2221 ataatcttca gtttcttcca ttttgtagta actttcgcca tccagtttga acttcttcaa
     2281 aagcaacaga ttatcaaata atgagcaagt cacgtggtgc atatcatcac attcattgat
     2341 ctcacaaaga ctcctcccga acccgacgag ttcacagttc catactacac tatccaccac
     2401 tctgttaacc acacattgct cgcaaaatac cgcaacaccg aagtctacac acctcacaag
     2461 atccaccaat agcaaaagga acgactcaga acaaccagag tagatttcca agaaaaagga
     2521 ctaaagaaca aggaaaccat atgctttcct tttaaactat gacaactttc tctttgaaca
     2581 atgcaagtgt aaaaacgtta acaacaaatt tacaa
//
LOCUS       XR_011757352            1823 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X9, ncRNA.
ACCESSION   XR_011757352
VERSION     XR_011757352.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1823
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..1823
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacaggcaaa actctatgtt
      421 ggaaaaggca tgcacgaaga cgtcttatct cttcaaaagt gaacattgtt ttggatattt
      481 ctgtgatcac tacatatatt accattggtc atgcccacaa agttactcat ggaaatgtct
      541 gatagtagct ggtgtactga cacgagttct ttcctaatgg taatatcgta tatattaatc
      601 taaagtttga ttaatgtata tttatttgag ggttttttag tgacacacaa tatcggtggt
      661 gttattgtta tttgggctcc aatagtcatg gtctatttct tggacataca aatttggtat
      721 tcaatatagg ctattatcat cagttgaatc tatggtgcgt ttagccactt gattgaggaa
      781 tttgtgcata gtcttggcgc tactcgattg caatcttaga tcacatcatt gctgctattc
      841 aatcacatcc agtacgagtg cctgatcgca cctctgctgt gggcgcaagt acagcctgta
      901 caagttccag attttagcat tattgcatgc ctgattgcat ccatgtgtgt tttgatctta
      961 gccctgctgc ttgcctgatt gcagccctgt tgcaggctaa tcatgactga ttgcagccat
     1021 tgcatgtttt ggtgataagt tgaaattgga acgatagtgt gcctaaaaga tccatgcatc
     1081 catctgcata tacatttgtg cttaagtgag tgtagacatg gttttcaatc gtgattgctc
     1141 gacacaggtt taccaggtta gagcaaaaga cgttatatcg gtcgtggacg tggtatcaat
     1201 aaattattgc ccatcaaagc tcaattttgg tgtatggcaa actcgcaaag tcccgaggga
     1261 agtcatgcgg agaagtggtg gtttgacatg attagaagaa ccatgaatga aggcacatgt
     1321 tgtcaccatg ttggctacgt acacaaataa tagcatgcct atcgaccaaa agagggtagg
     1381 aatgtgagat tcgagtgaaa aatgcatgct acttcatgat ctttatcgat aatcttcagt
     1441 ttcttccatt ttgtagtaac tttcgccatc cagtttgaac ttcttcaaaa gcaacagatt
     1501 atcaaataat gagcaagtca cgtggtgcat atcatcacat tcattgatct cacaaagact
     1561 cctcccgaac ccgacgagtt cacagttcca tactacacta tccaccactc tgttaaccac
     1621 acattgctcg caaaataccg caacaccgaa gtctacacac ctcacaagat ccaccaatag
     1681 caaaaggaac gactcagaac aaccagagta gatttccaag aaaaaggact aaagaacaag
     1741 gaaaccatat gctttccttt taaactatga caactttctc tttgaacaat gcaagtgtaa
     1801 aaacgttaac aacaaattta caa
//
LOCUS       XR_011757353            2740 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X10, ncRNA.
ACCESSION   XR_011757353
VERSION     XR_011757353.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2740
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2740
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X10"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggtga
      481 cattcagatt agttacttct atgtgtattg attttttttt taagtcaaat tattgattgc
      541 acaccaagtg tttgattaaa tgcctgaatg aataaagaaa aaagcttcaa gggtattgtc
      601 cttatatcat tatgctggta tgaaattgtg atctaaagtc attgtgatag gggttgtaca
      661 aaggttttgc caacaatgta gcaggttagt tttcaaaagt ttagccaact tccaaacttt
      721 ctcaactcta cataacatga gataactacc atttacggta ttttgtgtca accttttaac
      781 tctttggacc agatttcatt tgtttaatga atttgatgat ggaataagga gttgccgtaa
      841 tcagctcgca aaccataaac agcgtagaag gaaaccttat ggtagcactt tgataatttt
      901 aaaagcaaaa gcggttgaca aactcaaatg aaccgtgccc ttgcagccct ttaaaacaat
      961 tatctaaaac taatcaactt tttgaagctt atcataacct tacaaagtca acatgacttt
     1021 aattcaattt tgtaatcgat aatgaataaa ctgtttatat ttttatatct aatcttgcta
     1081 ttataaattt aggagatctt tatttacaaa actaatatat ttatatatcc actataacgg
     1141 aatccactac gaatatatat gtatatgttt accaaaataa gctacaatca ggcaacggtt
     1201 aatgataaga atatcgacaa ccctgtgcag tatataggtt tatatagtta gcatataata
     1261 ggaactccat tgtcagtcaa tcactcagga cccatctatt ttttctgttt atgtaatcac
     1321 tttgtaagtt aatgggttaa aatagaaccc tttgtattaa tgtgaaatga ttcttattct
     1381 attgagttaa ttttttttta tcaggcaaaa ctctatgttg gaaaaggcat gcacgaagac
     1441 gtcttatctc ttcaaaagtg aacattgttt tggatatttc tgtgatcact acatatatta
     1501 ccattggtca tgcccacaaa gttactcatg gaaatgtctg atagtagctg gtgtactgac
     1561 acgagttctt tcctaatggt aatatcgtat atattaatct aaagtttgat taatgtatat
     1621 ttatttgagg gttttttagt gacacacaat atcggtggtg ttattgttat ttgggctcca
     1681 atagtcatgg tctatttctt ggacatacaa atttggtatt caatataggc tattatcatc
     1741 agttgaatct atggtgcgtt tagccacttg attgaggaat ttgtgcatag tcttggcgct
     1801 actcgattgc aatcttagat cacatcattg ctgctattca atcacatcca gtacgagtgc
     1861 ctgatcgcac ctctgctgtg ggcgcaagta cagcctgtac aagttccaga ttttagcatt
     1921 attgcatgcc tgattgcatc catgtgtgtt ttgatcttag ccctgctgct tgcctgattg
     1981 cagccctgtt gcaggctaat catgactgat tgcagccatt gcatgttttg gtgataagtt
     2041 gaaattggaa cgatagtgtg cctaaaagat ccatgcatcc atctgcatat acatttgtgc
     2101 ttaagtgagt gtagacatgg ttttcaatcg tgattgctcg acacaggttt accaggttag
     2161 agcaaaagac gttatatcgg tcgtggacgt ggtatcaata aattattgcc catcaaagct
     2221 caattttggt gtatggcaaa ctcgcaaagt cccgagggaa gtcatgcgga gaagtggtgg
     2281 tttgacatga ttagaagaac catgaatgaa ggcacatgtt gtcaccatgt tggctacgta
     2341 cacaaataat agcatgccta tcgaccaaaa gagtaacttt cgccatccag tttgaacttc
     2401 ttcaaaagca acagattatc aaataatgag caagtcacgt ggtgcatatc atcacattca
     2461 ttgatctcac aaagactcct cccgaacccg acgagttcac agttccatac tacactatcc
     2521 accactctgt taaccacaca ttgctcgcaa aataccgcaa caccgaagtc tacacacctc
     2581 acaagatcca ccaatagcaa aaggaacgac tcagaacaac cagagtagat ttccaagaaa
     2641 aaggactaaa gaacaaggaa accatatgct ttccttttaa actatgacaa ctttctcttt
     2701 gaacaatgca agtgtaaaaa cgttaacaac aaatttacaa
//
LOCUS       XR_011757354            2773 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840337), transcript variant X11, ncRNA.
ACCESSION   XR_011757354
VERSION     XR_011757354.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2773
                     /gene="LOC139840337"
                     /note="uncharacterized LOC139840337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840337"
     ncRNA           1..2773
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840337"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /db_xref="GeneID:139840337"
ORIGIN      
        1 ttcttctact tcctgaagtt tcgtccgtga aatcagttta aaacatacca acaagggttc
       61 cattcagatt caactttgaa attcattatc acaaaaccca attcaagaaa taagcggacc
      121 ctctctttct ctgtaatttt tttttttaaa atttgaagag cagaaatctt attgaaacag
      181 aaacgaggag tacaggtata tccgatgcaa tccgcgctgc agttagagat aacttctatt
      241 caattacgaa tcagaaatag ttcacgaagt attaaggttc gtaggttgca atcgtcaata
      301 aaaacgttcc ttcctatttc ataatcaaat cagggttctt atggtgcaat cgatttgagt
      361 cctcaagatt cgacagatgg ttgtctgact gctgaaaaag gacagaaact gatcaaagct
      421 gagttaattt agatttcggt tcactagctc tgaacaagca tgaaggatac attaaggtga
      481 cattcagatt agttacttct atgtgtattg attttttttt taagtcaaat tattgattgc
      541 acaccaagtg tttgattaaa tgcctgaatg aataaagaaa aaagcttcaa gggtattgtc
      601 cttatatcat tatgctggta tgaaattgtg atctaaagtc attgtgatag gggttgtaca
      661 aaggttttgc caacaatgta gcaggttagt tttcaaaagt ttagccaact tccaaacttt
      721 ctcaactcta cataacatga gataactacc atttacggta ttttgtgtca accttttaac
      781 tctttggacc agatttcatt tgtttaatga atttgatgat ggaataagga gttgccgtaa
      841 tcagctcgca aaccataaac agcgtagaag gaaaccttat ggtagcactt tgataatttt
      901 aaaagcaaaa gcggttgaca aactcaaatg aaccgtgccc ttgcagccct ttaaaacaat
      961 tatctaaaac taatcaactt tttgaagctt atcataacct tacaaagtca acatgacttt
     1021 aattcaattt tgtaatcgat aatgaataaa ctgtttatat ttttatatct aatcttgcta
     1081 ttataaattt aggagatctt tatttacaaa actaatatat ttatatatcc actataacgg
     1141 aatccactac gaatatatat gtatatgttt accaaaataa gctacaatca ggcaacggtt
     1201 aatgataaga atatcgacaa ccctgtgcag tatataggtt tatatagtta gcatataata
     1261 ggaactccat tgtcagtcaa tcactcagga cccatctatt ttttctgttt atgtaatcac
     1321 tttgtaagtt aatgggttaa aatagaaccc tttgtattaa tgtgaaatga ttcttattct
     1381 attgagttaa ttttttttta tcaggcaaaa ctctatgttg gaaaaggcat gcacgaagac
     1441 gtcttatctc ttcaaaagtg aacattgttt tggatatttc tgtgatcact acatatatta
     1501 ccattggtca tgcccacaaa gttactcatg gaaatgtctg atagtagctg gtgtactgac
     1561 acgagttctt tcctaatggt aatatcgtat atattaatct aaagtttgat taatgtatat
     1621 ttatttgagg gttttttagt gacacacaat atcggtggtg ttattgttat ttgggctcca
     1681 atagtcatgg tctatttctt ggacatacaa atttggtatt caatataggc tattatcatc
     1741 agttgaatct atggtgcgtt tagccacttg attgaggaat ttgtgcatag tcttggcgct
     1801 actcgattgc aatcttagat cacatcattg ctgctattca atcacatcca gtacgagtgc
     1861 ctgatcgcac ctctgctgtg ggcgcaagta cagcctgtac aagttccaga ttttagcatt
     1921 attgcatgcc tgattgcatc catgtgtgtt ttgatcttag ccctgctgct tgcctgattg
     1981 cagccctgtt gcaggctaat catgactgat tgcagccatt gcatgttttg gtgataagtt
     2041 gaaattggaa cgatagtgtg cctaaaagat ccatgcatcc atctgcatat acatttggtt
     2101 taccaggtta gagcaaaaga cgttatatcg gtcgtggacg tggtatcaat aaattattgc
     2161 ccatcaaagc tcaattttgg tgtatggcaa actcgcaaag tcccgaggga agtcatgcgg
     2221 agaagtggtg gtttgacatg attagaagaa ccatgaatga aggcacatgt tgtcaccatg
     2281 ttggctacgt acacaaataa tagcatgcct atcgaccaaa agagggtagg aatgtgagat
     2341 tcgagtgaaa aatgcatgct acttcatgat ctttatcgat aatcttcagt ttcttccatt
     2401 ttgtagtaac tttcgccatc cagtttgaac ttcttcaaaa gcaacagatt atcaaataat
     2461 gagcaagtca cgtggtgcat atcatcacat tcattgatct cacaaagact cctcccgaac
     2521 ccgacgagtt cacagttcca tactacacta tccaccactc tgttaaccac acattgctcg
     2581 caaaataccg caacaccgaa gtctacacac ctcacaagat ccaccaatag caaaaggaac
     2641 gactcagaac aaccagagta gatttccaag aaaaaggact aaagaacaag gaaaccatat
     2701 gctttccttt taaactatga caactttctc tttgaacaat gcaagtgtaa aaacgttaac
     2761 aacaaattta caa
//
LOCUS       XR_011757355            1560 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840338), transcript variant X1, ncRNA.
ACCESSION   XR_011757355
VERSION     XR_011757355.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1560
                     /gene="LOC139840338"
                     /note="uncharacterized LOC139840338; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840338"
     ncRNA           1..1560
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840338"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840338"
ORIGIN      
        1 aataggaact ccattgtcag tcaatcactc aggacccatc tattttttct gtttatgtaa
       61 tcactttgta agttaatggg ttaaaataga accctttgta ttaatgtgaa atgattctta
      121 ttctattgag ttaatttttt tttatcaggc aaaactctat gttggaaaag gcatgcacga
      181 agacgtctta tctcttcaaa agtgaacatt gttttggata tttctgtgat cactacatat
      241 attaccattg gtcatgacca caaagttact catggaaatg tctgatagta gctggtgtac
      301 tgacacgagt tctttcctaa tggtaatatc gtatatatta atctaaagtt tgattaatgt
      361 atatttattt gagggttttt tagtgacaca caatatcggt ggtgttattg ttatttgggc
      421 tccaatagtc atggtctatt tcttggacat acaaatttgg tattcaatat aggctattat
      481 catcagttga atctatggtg cgtttagcca cttgattgag gaatttgtgc atagtcttgg
      541 cgctactcga ttgcaatctt agatcacatc attgctgcta ttcaatcaca tccagtacga
      601 gtgcctgatc gcacctctgc tgtgggcgca agtacagcct gtacaagttc cagattttag
      661 cattattgca tgcctgattg catccatgtg tgttttgatc ttagccctgc tgcttgcctg
      721 attgcagccc tgttgcaggc taatcatgac tgattgcagc cattgcatgt tttggtgata
      781 agttgaaatt ggaacgatag tgtgcctaaa agatccatgc atccatctgc atatacattt
      841 gtgcttaagt gagtgtagac atggttttca atcgtgattg ctcgacacag gtttaccagg
      901 ttagagcaaa agacgttata tcggtcgtgg acgtggtatc aataaattat tgcccatcaa
      961 agctcaattt tggtgtatgg caaactcgca aagtcccgag ggaagtcatg cggagaagtg
     1021 gtggtttgac atgattagaa gaaccatgaa tgaaggcaca tgttgtcacc atgttggcta
     1081 cgtacacaaa taatagcatg cctatcgacc aaaagagggt aggaatgtga gattcgagtg
     1141 aaaaatgcat gctacttcat gatctttatc gataatcttc agtttcttcc attttgtagt
     1201 aactttcgcc atccagtttg aacttcttca aaagcaacag attatcaaat aatgagcaag
     1261 tcacgtggtg catatcatca cattcattga tctcacaaag actcctcccg aacccgacga
     1321 gttcacagtt ccatactaca ctatccacca ctctgttaac cacacattgc tcgcaaaata
     1381 ccgcaacacc gaagtctaca cacctcacaa gatccaccaa tagcaaaagg aacgactcag
     1441 aacaaccaga gtagatttcc aagaaaaagg actacagaac aaggaaacca tatgctttcc
     1501 ttttaaacta tgacaacttt ctctttgaac aatgcaagtg taaaaacgtt aacaacaaat
//
LOCUS       XR_011757356            1450 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840338), transcript variant X2, ncRNA.
ACCESSION   XR_011757356
VERSION     XR_011757356.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1450
                     /gene="LOC139840338"
                     /note="uncharacterized LOC139840338; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840338"
     ncRNA           1..1450
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840338"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840338"
ORIGIN      
        1 aataggaact ccattgtcag tcaatcactc aggacccatc tattttttct gtttatgtaa
       61 tcactttgta agttaatggg ttaaaataga accctttgta ttaatgtgaa atgattctta
      121 ttctattgag ttaatttttt tttatcaggc aaaactctat gttggaaaag gcatgcacga
      181 agacgtctta tctcttcaaa agtgaacatt gttttggata tttctgtgat cactacatat
      241 attaccattg gtcatgacca caaagttact catggaaatg tctgatagta gctggtgtac
      301 tgacacgagt tctttcctaa tggtaatatc gtatatatta atctaaagtt tgattaatgt
      361 atatttattt gagggttttt tagtgacaca caatatcggt ggtgttattg ttatttgggc
      421 tccaatagtc atggtctatt tcttggacat acaaatttgg tattcaatat aggctattat
      481 catcagttga atctatggtg cgtttagcca cttgattgag gaatttgtgc atagtcttgg
      541 cgctactcga ttgcaatctt agatcacatc attgctgcta ttcaatcaca tccaccctgc
      601 tgcttgcctg attgcagccc tgttgcaggc taatcatgac tgattgcagc cattgcatgt
      661 tttggtgata agttgaaatt ggaacgatag tgtgcctaaa agatccatgc atccatctgc
      721 atatacattt gtgcttaagt gagtgtagac atggttttca atcgtgattg ctcgacacag
      781 gtttaccagg ttagagcaaa agacgttata tcggtcgtgg acgtggtatc aataaattat
      841 tgcccatcaa agctcaattt tggtgtatgg caaactcgca aagtcccgag ggaagtcatg
      901 cggagaagtg gtggtttgac atgattagaa gaaccatgaa tgaaggcaca tgttgtcacc
      961 atgttggcta cgtacacaaa taatagcatg cctatcgacc aaaagagggt aggaatgtga
     1021 gattcgagtg aaaaatgcat gctacttcat gatctttatc gataatcttc agtttcttcc
     1081 attttgtagt aactttcgcc atccagtttg aacttcttca aaagcaacag attatcaaat
     1141 aatgagcaag tcacgtggtg catatcatca cattcattga tctcacaaag actcctcccg
     1201 aacccgacga gttcacagtt ccatactaca ctatccacca ctctgttaac cacacattgc
     1261 tcgcaaaata ccgcaacacc gaagtctaca cacctcacaa gatccaccaa tagcaaaagg
     1321 aacgactcag aacaaccaga gtagatttcc aagaaaaagg actacagaac aaggaaacca
     1381 tatgctttcc ttttaaacta tgacaacttt ctctttgaac aatgcaagtg taaaaacgtt
     1441 aacaacaaat
//
LOCUS       XR_011757357            1477 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840338), transcript variant X3, ncRNA.
ACCESSION   XR_011757357
VERSION     XR_011757357.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1477
                     /gene="LOC139840338"
                     /note="uncharacterized LOC139840338; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840338"
     ncRNA           1..1477
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840338"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840338"
ORIGIN      
        1 aataggaact ccattgtcag tcaatcactc aggacccatc tattttttct gtttatgtaa
       61 tcactttgta agttaatggg ttaaaataga accctttgta ttaatgtgaa atgattctta
      121 ttctattgag ttaatttttt tttatcaggc aaaactctat gttggaaaag gcatgcacga
      181 agacgtctta tctcttcaaa agtgaacatt gttttggata tttctgtgat cactacatat
      241 attaccattg gtcatgacca caaagttact catggaaatg tctgatagta gctggtgtac
      301 tgacacgagt tctttcctaa tggtaatatc gtatatatta atctaaagtt tgattaatgt
      361 atatttattt gagggttttt tagtgacaca caatatcggt ggtgttattg ttatttgggc
      421 tccaatagtc atggtctatt tcttggacat acaaatttgg tattcaatat aggctattat
      481 catcagttga atctatggtg cgtttagcca cttgattgag gaatttgtgc atagtcttgg
      541 cgctactcga ttgcaatctt agatcacatc attgctgcta ttcaatcaca tccagtacga
      601 gtgcctgatc gcacctctgc tccctgctgc ttgcctgatt gcagccctgt tgcaggctaa
      661 tcatgactga ttgcagccat tgcatgtttt ggtgataagt tgaaattgga acgatagtgt
      721 gcctaaaaga tccatgcatc catctgcata tacatttgtg cttaagtgag tgtagacatg
      781 gttttcaatc gtgattgctc gacacaggtt taccaggtta gagcaaaaga cgttatatcg
      841 gtcgtggacg tggtatcaat aaattattgc ccatcaaagc tcaattttgg tgtatggcaa
      901 actcgcaaag tcccgaggga agtcatgcgg agaagtggtg gtttgacatg attagaagaa
      961 ccatgaatga aggcacatgt tgtcaccatg ttggctacgt acacaaataa tagcatgcct
     1021 atcgaccaaa agagggtagg aatgtgagat tcgagtgaaa aatgcatgct acttcatgat
     1081 ctttatcgat aatcttcagt ttcttccatt ttgtagtaac tttcgccatc cagtttgaac
     1141 ttcttcaaaa gcaacagatt atcaaataat gagcaagtca cgtggtgcat atcatcacat
     1201 tcattgatct cacaaagact cctcccgaac ccgacgagtt cacagttcca tactacacta
     1261 tccaccactc tgttaaccac acattgctcg caaaataccg caacaccgaa gtctacacac
     1321 ctcacaagat ccaccaatag caaaaggaac gactcagaac aaccagagta gatttccaag
     1381 aaaaaggact acagaacaag gaaaccatat gctttccttt taaactatga caactttctc
     1441 tttgaacaat gcaagtgtaa aaacgttaac aacaaat
//
LOCUS       XR_011757358            1427 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840338), transcript variant X4, ncRNA.
ACCESSION   XR_011757358
VERSION     XR_011757358.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1427
                     /gene="LOC139840338"
                     /note="uncharacterized LOC139840338; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840338"
     ncRNA           1..1427
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840338"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840338"
ORIGIN      
        1 aataggaact ccattgtcag tcaatcactc aggacccatc tattttttct gtttatgtaa
       61 tcactttgta agttaatggg ttaaaataga accctttgta ttaatgtgaa atgattctta
      121 ttctattgag ttaatttttt tttatcaggc aaaactctat gttggaaaag gcatgcacga
      181 agacgtctta tctcttcaaa agtgaacatt gttttggata tttctgtgat cactacatat
      241 attaccattg gtcatgacca caaagttact catggaaatg tctgatagta gctggtgtac
      301 tgacacgagt tctttcctaa tggtaatatc gtatatatta atctaaagtt tgattaatgt
      361 atatttattt gagggttttt tagtgacaca caatatcggt ggtgttattg ttatttgggc
      421 tccaatagtc atggtctatt tcttggacat acaaatttgg tattcaatat aggctattat
      481 catcagttga atctatggtg cgtttagcca cttgattgag gaatttgtgc atagtcttgg
      541 cgctactcga ttgcaatctt agatcacatc attgctgcta ttcaatcaca tccaccctgt
      601 tgcaggctaa tcatgactga ttgcagccat tgcatgtttt ggtgataagt tgaaattgga
      661 acgatagtgt gcctaaaaga tccatgcatc catctgcata tacatttgtg cttaagtgag
      721 tgtagacatg gttttcaatc gtgattgctc gacacaggtt taccaggtta gagcaaaaga
      781 cgttatatcg gtcgtggacg tggtatcaat aaattattgc ccatcaaagc tcaattttgg
      841 tgtatggcaa actcgcaaag tcccgaggga agtcatgcgg agaagtggtg gtttgacatg
      901 attagaagaa ccatgaatga aggcacatgt tgtcaccatg ttggctacgt acacaaataa
      961 tagcatgcct atcgaccaaa agagggtagg aatgtgagat tcgagtgaaa aatgcatgct
     1021 acttcatgat ctttatcgat aatcttcagt ttcttccatt ttgtagtaac tttcgccatc
     1081 cagtttgaac ttcttcaaaa gcaacagatt atcaaataat gagcaagtca cgtggtgcat
     1141 atcatcacat tcattgatct cacaaagact cctcccgaac ccgacgagtt cacagttcca
     1201 tactacacta tccaccactc tgttaaccac acattgctcg caaaataccg caacaccgaa
     1261 gtctacacac ctcacaagat ccaccaatag caaaaggaac gactcagaac aaccagagta
     1321 gatttccaag aaaaaggact acagaacaag gaaaccatat gctttccttt taaactatga
     1381 caactttctc tttgaacaat gcaagtgtaa aaacgttaac aacaaat
//
LOCUS       XR_011757359            1481 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840338), transcript variant X5, ncRNA.
ACCESSION   XR_011757359
VERSION     XR_011757359.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1481
                     /gene="LOC139840338"
                     /note="uncharacterized LOC139840338; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840338"
     ncRNA           1..1481
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840338"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840338"
ORIGIN      
        1 tataatagga actccattgt cagtcaatca ctcaggaccc atctattttt tctgtttatg
       61 taatcacttt gtaagttaat gggttaaaat agaacccttt gtattaatgt gaaatgattc
      121 ttattctatt gagttaattt ttttttatca ggcaaaactc tatgttggaa aaggcatgca
      181 cgaagacgtc ttatctcttc aaaagtgaac attgttttgg atatttctgt gatcactaca
      241 tatattacca ttggtcatga ccacaaagtt actcatggaa atgtctgata gtagctggtg
      301 tactgacacg agttctttcc taatggtaat atcgtatata ttaatctaaa gtttgattaa
      361 tgtatattta tttgagggtt ttttagtgac acacaatatc ggtggtgtta ttgttatttg
      421 ggctccaata gtcatggtct atttcttgga catacaaatt tggtattcaa tataggctat
      481 tatcatcagt tgaatctatg gtgcgtttag ccacttgatt gaggaatttg tgcatagtct
      541 tggcgctact cgattgcaat cttagatcac atcattgctg ctattcaatc acatccagta
      601 cgagtgcctg atcgcacctc tgctgtgggc gcaagtacag cctgtacaag ttccagattt
      661 tagcattatt gcatgcctga ttgcatccat gtgtgttttg atcttagccc tgctgcttgc
      721 ctgattgcag ccctgttgca ggctaatcat gactgattgc agccattgca tgttttggtg
      781 ataagttgaa attggaacga tagtgtgcct aaaagatcca tgcatccatc tgcatataca
      841 tttgtgctta agtgagtgta gacatggttt tcaatcgtga ttgctcgaca caggtttacc
      901 aggttagagc aaaagacgtt atatcggtcg tggacgtggt atcaataaat tattgcccat
      961 caaagctcaa ttttggtgta tggcaaactc gcaaagtccc gagggaagtc atgcggagaa
     1021 gtggtggttt gacatgatta gaagaaccat gaatgaaggc acatgttgtc accatgttgg
     1081 ctacgtacac aaataatagc atgcctatcg accaaaagag taactttcgc catccagttt
     1141 gaacttcttc aaaagcaaca gattatcaaa taatgagcaa gtcacgtggt gcatatcatc
     1201 acattcattg atctcacaaa gactcctccc gaacccgacg agttcacagt tccatactac
     1261 actatccacc actctgttaa ccacacattg ctcgcaaaat accgcaacac cgaagtctac
     1321 acacctcaca agatccacca atagcaaaag gaacgactca gaacaaccag agtagatttc
     1381 caagaaaaag gactacagaa caaggaaacc atatgctttc cttttaaact atgacaactt
     1441 tctctttgaa caatgcaagt gtaaaaacgt taacaacaaa t
//
LOCUS       XM_071830606            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840339), mRNA.
ACCESSION   XM_071830606
VERSION     XM_071830606.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139840339"
                     /note="uncharacterized LOC139840339; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840339"
     CDS             144..788
                     /gene="LOC139840339"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686707.1"
                     /db_xref="GeneID:139840339"
                     /translation="MPVRIVESPAPSNSSGANPGQTCLQQCSLLSVGQAFSGTQNVSS
                     PQKDEAWRVNVRIQGCDLSHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTN
                     KWKATSEVDIDHWTKFPSFSPLLSQVEVDGGKSLDLSNYQYIFMRWKEQYFVNVGADC
                     GLTIAGFYYVCFSCVDGSINGYYYDPNSSPFQKLELKTTNEGRSGFCFSSYALQ"
     misc_feature    228..734
                     /gene="LOC139840339"
                     /note="Vacuolar import and degradation protein; Region:
                     Vac_ImportDeg; pfam09783"
                     /db_xref="CDD:462897"
ORIGIN      
        1 tgtttcttac atcttcttac atctccttca ttgattcatt tacatgatat acatacagat
       61 acagatagat atagataata catatatacg tatctttcga atcgtcgcct tatatcgctc
      121 aattatatat attctctgca gatatgcctg taagaattgt agaatctcca gcaccttcta
      181 attcctcagg tgcaaatcct ggacaaacat gtcttcaaca atgttcactt ttaagtgttg
      241 gacaggcatt ttcaggaact cagaatgttt caagtcccca aaaagatgaa gcatggagag
      301 ttaacgtacg gatacaaggc tgtgacctca gtcatggata tctctgtggc accatggaag
      361 cactaaatgt tcctatggca gatacaccag tggttacttt ttgggagggc gaaattgttg
      421 ataccaagaa ttatacgttc ttcaccaaca aatggaaagc aacgtcagaa gtcgacatag
      481 accactggac aaaatttcca tctttttcgc ctcttttaag ccaagtggaa gttgatggtg
      541 gaaaatcgtt ggaccttagt aactatcaat atatatttat gagatggaaa gagcaatact
      601 ttgtaaatgt tggggctgat tgtgggttga cgatagcagg cttttactat gtttgcttct
      661 cttgtgtgga tgggtcaata aatggctact attatgatcc aaatagcagc ccgtttcaga
      721 agctcgagct gaaaacaacc aacgaaggaa gatcaggttt ctgcttctcg tcatatgcac
      781 tgcaataaga gtgtgtatct gttttacctc aaatcagtgt tatttttgag atagatttta
      841 ctgattttcg gtcctgcatt ggttggggtt tgatggagct ttagttgtaa catttttagt
      901 tttttatttg tatgccaatg tatcgtgtta aatccgttgt atttcttatg cttaatgtat
      961 ggttctgctt ctggcgaacg ttggattgtt gttgtattca attgtgaagg tggattaata
     1021 aaagtattta gcttttcaaa aaaatgtatt acctgagatt acaaaattga agaaaat
//
LOCUS       XM_071830607            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840340), mRNA.
ACCESSION   XM_071830607
VERSION     XM_071830607.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139840340"
                     /note="uncharacterized LOC139840340; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840340"
     CDS             26..1000
                     /gene="LOC139840340"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686708.1"
                     /db_xref="GeneID:139840340"
                     /translation="MMWTEIIFGVVIYRLVRRFFYDDGEEHIDFGTTGSNALFAVSDR
                     LQALYGGKAYVGLRIPDPDTASRQNIDLVLVTKGEAVVVSVTNASGIVSIDGDGTWVC
                     TDRSKNKTERLQDPMVEAKKQVAVLESYLEQRGVALPKGYLSCKIICPNPNFRTIHPD
                     YFPLEVVTYEQWAELKPEKKSISGWIKGALRSDNKETQKSIQQNLSFILSTAPMWDRL
                     ELKNNKHILGEFLEFKGKKDDIASLKNIKRSKVSRMIIQNTSMFGLANSKLQVLYAPR
                     DYRNEGASSYEWNDVTVRSSTEVLFQLQETAKIQKVKLSSIMSMSLSP"
     misc_feature    122..442
                     /gene="LOC139840340"
                     /note="Nuclease-related domain; Region: NERD; pfam08378"
                     /db_xref="CDD:462454"
     polyA_site      1116
                     /gene="LOC139840340"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatcacagcg atcattcagc catcaatgat gtggacggaa ataatattcg gtgtggtaat
       61 ctaccggtta gtacgccgtt tcttctatga tgacggtgaa gaacatatcg attttggtac
      121 caccggttcc aatgctcttt tcgccgtctc cgatcgactt caagctctat atggtggcaa
      181 agcttatgtc gggcttcgta ttcctgaccc tgatactgct tcacgacaaa atattgattt
      241 ggtcctcgta acgaaagggg aggcagtggt tgtttctgta acaaatgctt ctgggattgt
      301 atccattgat ggggatggaa cgtgggtttg caccgatcgt tctaagaaca aaacagagcg
      361 tcttcaggat ccgatggtgg aggccaaaaa gcaagttgca gttcttgaat cttatcttga
      421 acaaagggga gttgctcttc caaagggata tttgtcctgc aagattattt gccccaaccc
      481 aaactttcgc accatccatc cagattactt tccattggag gttgtaactt atgagcaatg
      541 ggcagaattg aaaccagaga aaaagagcat atctggctgg attaaaggtg ctctacgtag
      601 tgataataaa gaaacacaga agtcaataca acagaacctt agtttcatcc ttagtactgc
      661 tccaatgtgg gacaggttgg agctaaaaaa caacaaacat attttaggag aatttttaga
      721 attcaaaggg aagaaagatg atatcgcgtc tttaaaaaat ataaagagat cgaaagttag
      781 ccgtatgatc atccaaaaca caagcatgtt tggtttagct aattcaaagc ttcaagttct
      841 atatgcacca cgcgattaca gaaatgaagg agcttccagt tacgagtgga atgatgtaac
      901 agttagatcg agtacagagg tgttgtttca gcttcaagag acggctaaaa ttcagaaagt
      961 taaattgtca tcaattatgt ctatgtcatt aagcccttga ttttcatgtg atggtcgtat
     1021 gatcaactat atacgaagcg agaaatatat agccatgtga tgtaagtctt gatacaatgt
     1081 aatttttgcg catatatgaa tatgaatatt gatgct
//
LOCUS       XM_071830608            1119 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable CCR4-associated
            factor 1 homolog 6 (LOC139840341), mRNA.
ACCESSION   XM_071830608
VERSION     XM_071830608.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1119
                     /gene="LOC139840341"
                     /note="probable CCR4-associated factor 1 homolog 6;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 27 Proteins"
                     /db_xref="GeneID:139840341"
     CDS             150..959
                     /gene="LOC139840341"
                     /codon_start=1
                     /product="probable CCR4-associated factor 1 homolog 6"
                     /protein_id="XP_071686709.1"
                     /db_xref="GeneID:139840341"
                     /translation="MSILSKTGSIHIREVWNHNLEQEFTLIRNLVDQFPYIAMDTEFP
                     GIVIRPVGNFKNSNAYHYQTLKDNVDLLKLIQLGLTFSDEHGNLPKCGTNKYCVWQFN
                     FREFDVNDDVFANDSVELLKQSGMDFNKNIDDGIDVVRFGELLMSSGIVLNDNVFWVT
                     FHSGYDFGYLLKVLTCQHLPETQEGFFDLINMYFPTVFDIKHLMKFCNSLHGGLNKLA
                     ELLEVERIGVCHQAGSDSLLTACTFRKLKENFFSGSLEKYAGVLYGLGVEN"
     misc_feature    183..950
                     /gene="LOC139840341"
                     /note="CAF1 family ribonuclease; Region: CAF1; cl23804"
                     /db_xref="CDD:474062"
ORIGIN      
        1 ctctcccagc agcattcacc caatcaaatg aaaaaatcca aaaggtttct ttcccgacca
       61 atttcgaaac cctaatttga aactcctttc aaaattagat ctcaatagca aagattcgta
      121 atgtaatcga taaatttttg tcatgagaaa tgtcgatttt atctaaaaca ggttcaattc
      181 atatacgaga ggtatggaat cataatctcg aacaagaatt cacattaatc agaaatttag
      241 ttgatcaatt tccctacatt gcaatggaca ctgaatttcc aggaattgtt attcgtccgg
      301 ttggtaattt caaaaacagc aatgcttatc attaccaaac gttaaaggat aatgttgatt
      361 tgctcaaatt gattcaatta gggttaacat tttccgatga acacggtaat ttgccgaaat
      421 gcggtacgaa taagtattgc gtttggcagt tcaatttccg cgaattcgac gtaaacgatg
      481 atgttttcgc taatgattct gtcgagcttt tgaaacaaag tgggatggat tttaataaga
      541 atattgatga tggaattgat gtagtgagat ttggtgaatt attaatgtca tctggtattg
      601 tgttgaatga taacgtgttt tgggttactt ttcatagcgg atatgatttc gggtacttgt
      661 taaaggtgtt gacttgtcaa cacttacccg agacacaaga aggatttttt gatttgatta
      721 atatgtattt tccgaccgtt tttgatatta agcatttgat gaagttttgt aatagtcttc
      781 atggtgggtt gaataagtta gctgagttgt tggaagttga aaggattggt gtttgtcatc
      841 aggctggttc ggatagtttg ttaacggcgt gtactttcag gaagttgaaa gaaaatttct
      901 ttagtggttc gcttgagaag tatgctggcg ttttgtacgg tttaggtgtt gagaattgac
      961 aacgatggat tgttcattgt tggatataga aatagaaaat aagtataata agttatagaa
     1021 aatagagatt gaaacgttgg tcgtttgaga tatgtgtgcg ttgttatcac accatctttt
     1081 gtatacattt tgagaagtaa aaaaggttct ctcttttat
//
LOCUS       XM_071830609            1386 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G2/mitotic-specific cyclin
            S13-7-like (LOC139840342), mRNA.
ACCESSION   XM_071830609
VERSION     XM_071830609.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1386
                     /gene="LOC139840342"
                     /note="G2/mitotic-specific cyclin S13-7-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139840342"
     CDS             14..1306
                     /gene="LOC139840342"
                     /codon_start=1
                     /product="G2/mitotic-specific cyclin S13-7-like"
                     /protein_id="XP_071686710.1"
                     /db_xref="GeneID:139840342"
                     /translation="MKQKNMAVAPAAGQNKSRRALGDIGNLVTLRPLEGKPLPAVNRP
                     VTRSFCAQLVANAQKEAAANNKKPLTMNADNNKMVQPKKKAAVKPKPAPVPQNVDIIE
                     ISPDTVEKAKPESSNSRKKKPQLSLTSTLTARSKAACGLNYKPKPKNIIDIDAADVDN
                     ELAAVEYVEDIYKFYKLVENESKVHDYMHKQPEINDKMRAILIDWLIEVHNKFELTNE
                     ALYLTINIVDRFLAAETVARRELQCVGMSAMLIASKYEEIWAPEVSDFVQISDRAYEH
                     RHVLVMEKRILGRLEWNLTVPTPYVFLTRFIKAAAVVPHDMIMENMVYFYAELGMMHY
                     EMIRFCPSMVAAAAVYAARATLNSLKVWHETLELHTGYKDVQVIECAKMMVMFHLMAK
                     DDEKRKVIYRKYSSGTRGAVALYTPAKCLLAAAGVVRV"
     misc_feature    461..889
                     /gene="LOC139840342"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; Region:
                     CYCLIN_AtCycB-like_rpt1; cd20567"
                     /db_xref="CDD:410270"
     misc_feature    order(509..514,521..526,533..538,545..547,761..766,
                     773..787,794..802,851..853,860..865,872..877,884..889)
                     /gene="LOC139840342"
                     /note="putative CDK interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:410270"
     misc_feature    902..1264
                     /gene="LOC139840342"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
ORIGIN      
        1 aggggttggg gttatgaagc agaagaacat ggcggtggct ccggcagccg gacaaaacaa
       61 gagccgccgt gcacttggtg acatcggaaa cttagtcact ctccggcccc ttgaaggcaa
      121 gccacttccg gcagtcaatc gccctgttac aagaagtttt tgtgcacaat tagtagccaa
      181 tgctcagaaa gaagcagccg caaataacaa gaaaccattg acaatgaatg ctgataacaa
      241 caaaatggta cagcctaaga agaaagctgc agtaaagccc aaaccagcac ctgtgccaca
      301 aaatgtggac ataatcgaga tcagcccgga tacagtagaa aaggcgaaac cagaatcatc
      361 gaattcacga aaaaagaagc ctcagttgtc actcacttcg acacttactg cacgaagcaa
      421 ggctgcctgt ggccttaact acaaaccaaa accaaaaaat atcattgaca ttgatgctgc
      481 agatgtcgat aatgaactcg ctgctgttga atacgttgaa gacatctaca aattctacaa
      541 actcgtggag aatgagagca aagttcatga ctacatgcac aaacagccag aaatcaatga
      601 caaaatgagg gcgattctga tcgactggct gattgaagta cacaacaagt ttgagctcac
      661 taacgaagcg ttgtacctca ctattaacat cgttgaccgt ttcttggctg ctgaaacggt
      721 tgctagaaga gaactgcaat gtgttggcat gagtgcaatg cttattgcct caaaatatga
      781 agaaatttgg gctcctgaag ttagcgattt cgttcaaatc tctgatcgag cttatgagca
      841 tcgacacgtt ttagtgatgg agaaacgaat cttgggtcga ctcgaatgga atttaactgt
      901 cccaacgcct tatgttttcc tcacccggtt catcaaagct gctgcagttg ttccacacga
      961 tatgatcatg gaaaatatgg tgtacttcta tgctgaactg ggaatgatgc attatgagat
     1021 gatcagattt tgtccatcaa tggtggctgc agctgctgtg tatgcagcac gtgcgacgtt
     1081 aaacagttta aaagtgtggc acgagacgtt ggaattgcac acgggttata aggatgtgca
     1141 ggtgattgag tgtgctaaaa tgatggttat gtttcacttg atggcaaaag atgatgagaa
     1201 aaggaaggtg atttacagga agtattcgag tgggacccgt ggtgcggttg cattgtacac
     1261 tccggctaaa tgtttgttgg ctgctgccgg agttgtacga gtttaagcgt ttgttggtat
     1321 aggtagtatc aaactttttg tttgttttgt ttgaaacagt aagtttcttg ttggatggaa
     1381 ggataa
//
LOCUS       XM_071830610            1705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein IQ-DOMAIN 21-like
            (LOC139840343), mRNA.
ACCESSION   XM_071830610
VERSION     XM_071830610.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1705
                     /gene="LOC139840343"
                     /note="protein IQ-DOMAIN 21-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840343"
     CDS             20..1132
                     /gene="LOC139840343"
                     /codon_start=1
                     /product="protein IQ-DOMAIN 21-like"
                     /protein_id="XP_071686711.1"
                     /db_xref="GeneID:139840343"
                     /translation="MGKKRGGWFSSVKKVFKPSNKDFNDNKYYQNLFRKENAVEKREE
                     DKPEVVSFEHFPESSPDVTNEESDGEDRNHAISVAAATAAAAEAAVAAAQAAAKVVRL
                     AGYGRHSREERAAILIQSYYRGYLSRRALRALKGLVRLQALVRGHNVRKQAQMTMRCM
                     QALVRVQARVRARRLELTHEKLHKKVEIDENMIAPMKAREHRNRNFEKIKESSLRKHD
                     AEMKRERALAYAFTYQHEQKQQNYLHQESDTTVIYPNDHGKQQWGWNWLENWMALQPY
                     HTNLVGPNEGSNLTISANDDVSVKTVEMDLVTPVSSEYITAGRLSGETFESAQHSQSQ
                     RQSISSDQVPSYMAPTQSAKAKVRVQNLGKNKGQQV"
     misc_feature    347..415
                     /gene="LOC139840343"
                     /note="Calmodulin-binding motif; Region: IQ; smart00015"
                     /db_xref="CDD:197470"
     misc_feature    <1046..>1099
                     /gene="LOC139840343"
                     /note="Protein of unknown function (DUF4005); Region:
                     DUF4005; pfam13178"
                     /db_xref="CDD:404128"
ORIGIN      
        1 agtgatttga ttcgcgaaaa tgggaaagaa acgtggcggt tggttttctt cggttaaaaa
       61 ggtttttaaa ccttcaaaca aagatttcaa tgataataag tactatcaga atctttttcg
      121 caaagaaaat gccgtggaaa aacgggaaga agacaagcca gaggttgttt cattcgagca
      181 tttcccagag agctcgccag atgtcaccaa tgaggaaagt gacggtgaag atcggaatca
      241 tgcgatttct gtagcagcgg ctactgcagc tgcagccgaa gctgctgttg ctgccgcaca
      301 agctgcagct aaagttgttc gtttagctgg ttatgggcgt cattctaggg aagaaagagc
      361 tgctatactg atacaatcat attatagagg ttatctttct agacgtgcac tacgggcact
      421 aaagggactg gtgagattgc aggcgctagt aaggggccat aacgtgcgaa aacaagctca
      481 gatgacaatg aggtgtatgc aagctttagt acgtgtgcag gcaagagtgc gtgcacgcag
      541 actagagtta acacatgaga agctccataa gaaagttgag atagatgaaa atatgatcgc
      601 accgatgaaa gcacgagaac atagaaaccg aaactttgag aagattaaag aaagtagttt
      661 gagaaaacac gatgcagaga tgaaaagaga acgagctctt gcttacgcat ttacctacca
      721 gcatgagcag aagcaacaaa attacctgca tcaagaatct gataccacgg tgatatatcc
      781 caatgatcat ggaaaacaac aatggggatg gaattggctt gagaattgga tggcattaca
      841 accttaccac acaaaccttg tggggcccaa cgaaggatcc aatctgacca tatccgcaaa
      901 tgatgatgta tcagttaaaa cagttgaaat ggatttagtt acacccgtga gctcagagta
      961 cataacagcg ggccggctca gtggagagac atttgaatct gcacaacatt ctcagtcaca
     1021 acggcagtcg atttcttctg accaggtccc aagctatatg gccccaaccc aatcagccaa
     1081 agccaaggtc cgggttcaga atctaggtaa gaacaaaggc caacaggttt agaaagtggg
     1141 acccattaat gggctctcgt tcgatacatc aggttctgga ggtaatgcaa cttatcagat
     1201 acctcgaagc ccaagtccga atcccaaagg atatgttaat ggaattaatg ttgttcgagg
     1261 tcagtcaaaa tggtcaacag gctacagccc tgattcaagt ggaggcgatg atgggtcaac
     1321 gggtcgatat acatggagac accgttttgg ttgattatgg tatcctggtg gtaataacta
     1381 aaacctcctt cctaagatga ttgtgtcata tcatttcctt tataaagtta tcgttaattt
     1441 tgtcatgttt agtctatagt ttttgtcact atgttaaatc taggtttgaa actaaaatgc
     1501 taaagtattg tgtgaatatg gtcatttcgt cgagtatgtt ttgacattct acttagtttc
     1561 tacagttatc ttccacatta cacccgagac atatagatca atcaacatct ctgtttagtt
     1621 acaaatacat gaatacttac ttcaatacag tcctttagtc gacatgttta ccttaacaaa
     1681 agtatcacag ttttgtacta ctgta
//
LOCUS       XR_011757360            1612 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840344), transcript variant X1, ncRNA.
ACCESSION   XR_011757360
VERSION     XR_011757360.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1612
                     /gene="LOC139840344"
                     /note="uncharacterized LOC139840344; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840344"
     ncRNA           1..1612
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840344"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840344"
ORIGIN      
        1 agtaatcact ttcaactatt ctaatcaaca cctatttcac gatacactca tccagacatg
       61 gcgtaagatt actgatgacc tttggcagtt taatatcgat tgatgccaac gtgttggtga
      121 agaaaaatta atttcttata tgcgtttcaa tctatcattg ttgccaattc ttattatgta
      181 gattactgct gttgaactcc atctccctac tattaacatt tatcatggat catggatcga
      241 ttcaattaat caatattgtg aaaatgaatg aggtacatgt tatatggtga tgtgggtttg
      301 gttggtactt atttgtttca atttataata taaaaattcc acaaatggct actgaaccat
      361 ggcacatctg atcaagaatc atgtcgttgt tccagaatta gaatgtggag cgtattcctt
      421 gtcgtgacta cgatatgaaa ctaaagtact gaagtcgcat caagtatttt tcgactggta
      481 gcgtaaatag ttctaatttc acgttaaatc tataatgtac tttgatcaaa tttttctaca
      541 agtttatgat ttgatacaag tctttgtggt gatggagggt cgctcgtggt atttagtatt
      601 ggaggcatag gtacgcaaga ctgaatcgtc atccttatca gaaataaagc ggatggattt
      661 cgaggttgtt tcgatctcta atggaaaaga agaagttgtt aaagcagcta acatactatt
      721 taaaaagtat tatgtggatg gagattccaa agaaccgttt ttagtgaaac ctacttgact
      781 gaggcactca tgacccttgg tttgttgctt ctttagtgtt tttttgttta aatccttata
      841 tgtatataga agaatagtag aagtatttaa tgatatcttg tgtgttacca tgatttacta
      901 ttaggtgctg taaagccata tcccgatctt atactaattt atggtcatgc gaggtgccat
      961 cttggttttc gagcatggcg aattcgtaac accgagattg tgcaagccta ctttatcctt
     1021 ttgttttctg cttccatgat ataagctcat attttttgtt acgattataa ctaaaatttt
     1081 gtacaaataa ttttaaaact tgactaaaat cgtaatgtgc aattttcttg gaagttccaa
     1141 aattgaaatt attgcagctt ttcatggaag ttgcaatgtt caaatatttg caatgctaaa
     1201 acttcagcat taatattctg agctaccata cctattgtta cttgactttt taataatgca
     1261 gacatatgag acctctgaag tacaagaaat gcggcttgat tctgaaagcc attcaaaggt
     1321 ttactaaagt gaagtaaaac tacggttctt aagattcgag tacaagagat gttagatgag
     1381 ttgatgatat tagaaggagc atatgtaatt gttacattga tcaacttcct tctataaatt
     1441 attcacttta cagtggtatt aagatacggt tgtgtgttgt ttaataggag tatctaatag
     1501 aggaactata taggtggacc ggttttcttt agttagttca agtgatatcg agtctaaatg
     1561 ttaaatgtgt caaataatgt ttgatttgta tatgttttct ttgttggaag ca
//
LOCUS       XR_011757361            1507 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840344), transcript variant X2, ncRNA.
ACCESSION   XR_011757361
VERSION     XR_011757361.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1507
                     /gene="LOC139840344"
                     /note="uncharacterized LOC139840344; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840344"
     ncRNA           1..1507
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840344"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840344"
ORIGIN      
        1 agtaatcact ttcaactatt ctaatcaaca cctatttcac gatacactca tccagacatg
       61 gcgtaagatt actgatgacc tttggcagtt taatatcgat tgatgccaac gtgttggtga
      121 agaaaaatta atttcttata tgcgtttcaa tctatcattg ttgccaattc ttattatgta
      181 gattactgct gttgaactcc atctccctac tattaacatt tatcatggat catggatcga
      241 ttcaattaat caatattgtg aaaatgaatg aggtacatgt tatatggtga tgtgggtttg
      301 gttggtactt atttgtttca atttataata taaaaattcc acaaatggct actgaaccat
      361 ggcacatctg atcaagaatc atgtcgttgt tccagaatta gaatgtggag cgtattcctt
      421 gtcgtgacta cgatatgaaa ctaaagtact gaagtcgcat caagtatttt tcgactggta
      481 gcgtaaatag ttctaatttc acgttaaatc tataatgtac tttgatcaaa tttttctaca
      541 agtttatgat ttgatacaag tctttgtggt gatggagggt cgctcgtggt atttagtatt
      601 ggaggcatag gtacgcaaga ctgaatcgtc atccttatca gaaataaagc ggatggattt
      661 cgaggttgtt tcgatctcta atggaaaaga agaagttgtt aaagcagcta acatactatt
      721 taaaaagtat tatgtggatg gagattccaa agaaccgttt ttagtgaaac ctacttgact
      781 gaggcactca tgacccttgg tgctgtaaag ccatatcccg atcttatact aatttatggt
      841 catgcgaggt gccatcttgg ttttcgagca tggcgaattc gtaacaccga gattgtgcaa
      901 gcctacttta tccttttgtt ttctgcttcc atgatataag ctcatatttt ttgttacgat
      961 tataactaaa attttgtaca aataatttta aaacttgact aaaatcgtaa tgtgcaattt
     1021 tcttggaagt tccaaaattg aaattattgc agcttttcat ggaagttgca atgttcaaat
     1081 atttgcaatg ctaaaacttc agcattaata ttctgagcta ccatacctat tgttacttga
     1141 ctttttaata atgcagacat atgagacctc tgaagtacaa gaaatgcggc ttgattctga
     1201 aagccattca aaggtttact aaagtgaagt aaaactacgg ttcttaagat tcgagtacaa
     1261 gagatgttag atgagttgat gatattagaa ggagcatatg taattgttac attgatcaac
     1321 ttccttctat aaattattca ctttacagtg gtattaagat acggttgtgt gttgtttaat
     1381 aggagtatct aatagaggaa ctatataggt ggaccggttt tctttagtta gttcaagtga
     1441 tatcgagtct aaatgttaaa tgtgtcaaat aatgtttgat ttgtatatgt tttctttgtt
     1501 ggaagca
//
LOCUS       XR_011757362            1641 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840344), transcript variant X3, ncRNA.
ACCESSION   XR_011757362
VERSION     XR_011757362.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1641
                     /gene="LOC139840344"
                     /note="uncharacterized LOC139840344; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840344"
     ncRNA           1..1641
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840344"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840344"
ORIGIN      
        1 agtaatcact ttcaactatt ctaatcaaca cctatttcac gatacactca tccagacatg
       61 gcgtaagatt actgatgacc tttggcagtt taatatcgat tgatgccaac gtgttggtga
      121 agaaaaatta atttcttata tgcgtttcaa tctatcattg ttgccaattc ttattatgta
      181 gattactgct gttgaactcc atctccctac tattaacatt tatcatggat catggatcga
      241 ttcaattaat caatattgtg aaaatgaatg aggtacatgt tatatggtga tgtgggtttg
      301 gttggtactt atttgtttca atttataata taaaaattcc acaaatggct actgaaccat
      361 ggcacatctg atcaagaatc atgtcgttgt tccagaatta gaatgtggag ttaatgaagg
      421 cggttaatat gttttgcagc gtattccttg tcgtgactac gatatgaaac taaagtactg
      481 aagtcgcatc aagtattttt cgactggtag cgtaaatagt tctaatttca cgttaaatct
      541 ataatgtact ttgatcaaat ttttctacaa gtttatgatt tgatacaagt ctttgtggtg
      601 atggagggtc gctcgtggta tttagtattg gaggcatagg tacgcaagac tgaatcgtca
      661 tccttatcag aaataaagcg gatggatttc gaggttgttt cgatctctaa tggaaaagaa
      721 gaagttgtta aagcagctaa catactattt aaaaagtatt atgtggatgg agattccaaa
      781 gaaccgtttt tagtgaaacc tacttgactg aggcactcat gacccttggt ttgttgcttc
      841 tttagtgttt ttttgtttaa atccttatat gtatatagaa gaatagtaga agtatttaat
      901 gatatcttgt gtgttaccat gatttactat taggtgctgt aaagccatat cccgatctta
      961 tactaattta tggtcatgcg aggtgccatc ttggttttcg agcatggcga attcgtaaca
     1021 ccgagattgt gcaagcctac tttatccttt tgttttctgc ttccatgata taagctcata
     1081 ttttttgtta cgattataac taaaattttg tacaaataat tttaaaactt gactaaaatc
     1141 gtaatgtgca attttcttgg aagttccaaa attgaaatta ttgcagcttt tcatggaagt
     1201 tgcaatgttc aaatatttgc aatgctaaaa cttcagcatt aatattctga gctaccatac
     1261 ctattgttac ttgacttttt aataatgcag acatatgaga cctctgaagt acaagaaatg
     1321 cggcttgatt ctgaaagcca ttcaaaggtt tactaaagtg aagtaaaact acggttctta
     1381 agattcgagt acaagagatg ttagatgagt tgatgatatt agaaggagca tatgtaattg
     1441 ttacattgat caacttcctt ctataaatta ttcactttac agtggtatta agatacggtt
     1501 gtgtgttgtt taataggagt atctaataga ggaactatat aggtggaccg gttttcttta
     1561 gttagttcaa gtgatatcga gtctaaatgt taaatgtgtc aaataatgtt tgatttgtat
     1621 atgttttctt tgttggaagc a
//
LOCUS       XR_011757363            1150 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840344), transcript variant X4, ncRNA.
ACCESSION   XR_011757363
VERSION     XR_011757363.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1150
                     /gene="LOC139840344"
                     /note="uncharacterized LOC139840344; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840344"
     ncRNA           1..1150
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840344"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840344"
ORIGIN      
        1 agtaatcact ttcaactatt ctaatcaaca cctatttcac gatacactca tccagacatg
       61 gcgtaagatt actgatgacc tttggcagtt taatatcgat tgatgccaac gtgttggtga
      121 agaaaaatta atttcttata tgcgtttcaa tctatcattg ttgccaattc ttattatgta
      181 gattactgct gttgaactcc atctccctac tattaacatt tatcatggat catggatcga
      241 ttcaattaat caatattgtg aaaatgaatg aggtacatgt tatatggtga tgtgggtttg
      301 gttggtactt atttgtttca atttataata taaaaattcc acaaatggct actgaaccat
      361 ggcacatctg atcaagaatc atgtcgttgt tccagaatta gaatgtggag cgtattcctt
      421 gtcgtgacta cgatatgaaa ctaaagtact gaagtcgcat caagtatttt tcgactggta
      481 gcgtaaatag ttctaatttc acgttaaatc tataatgtac tttgatcaaa tttttctaca
      541 agtttatgat ttgatacaag tctttgtggt gatggagggt cgctcgtggt atttagtatt
      601 ggaggcatag gtacgcaaga ctgaatcgtc atccttatca gaaataaagc ggatggattt
      661 cgaggttgtt tcgatctcta atggaaaaga agaagttgtt aaagcagcta acatactatt
      721 taaaaagtat tatgtggatg gagattccaa agaaccgttt ttagtgaaac ctacttgact
      781 gaggcactca tgacccttga catatgagac ctctgaagta caagaaatgc ggcttgattc
      841 tgaaagccat tcaaaggttt actaaagtga agtaaaacta cggttcttaa gattcgagta
      901 caagagatgt tagatgagtt gatgatatta gaaggagcat atgtaattgt tacattgatc
      961 aacttccttc tataaattat tcactttaca gtggtattaa gatacggttg tgtgttgttt
     1021 aataggagta tctaatagag gaactatata ggtggaccgg ttttctttag ttagttcaag
     1081 tgatatcgag tctaaatgtt aaatgtgtca aataatgttt gatttgtata tgttttcttt
     1141 gttggaagca
//
LOCUS       XR_011757364            1512 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840344), transcript variant X5, ncRNA.
ACCESSION   XR_011757364
VERSION     XR_011757364.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1512
                     /gene="LOC139840344"
                     /note="uncharacterized LOC139840344; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840344"
     ncRNA           1..1512
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840344"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840344"
ORIGIN      
        1 agtaatcact ttcaactatt ctaatcaaca cctatttcac gatacactca tccagacatg
       61 gcgtaagatt actgatgacc tttggcagtt taatatcgat tgatgccaac gtgttggtga
      121 agaaaaatta atttcttata tgcgtttcaa tctatcattg ttgccaattc ttattatgta
      181 gattactgct gttgaactcc atctccctac tattaacatt tatcatggat catggatcga
      241 ttcaattaat caatattgtg aaaatgaatg aggtacatgt tatatggtga tgtgggtttg
      301 gttggtactt atttgtttca atttataata taaaaattcc acaaatggct actgaaccat
      361 ggcacatctg atcaagaatc atgtcgttgt tccagaatta gaatgtggag cgtattcctt
      421 gtcgtgacta cgatatgaaa ctaaagtact gaagtcgcat caagtatttt tcgactgggt
      481 cgctcgtggt atttagtatt ggaggcatag gtacgcaaga ctgaatcgtc atccttatca
      541 gaaataaagc ggatggattt cgaggttgtt tcgatctcta atggaaaaga agaagttgtt
      601 aaagcagcta acatactatt taaaaagtat tatgtggatg gagattccaa agaaccgttt
      661 ttagtgaaac ctacttgact gaggcactca tgacccttgg tttgttgctt ctttagtgtt
      721 tttttgttta aatccttata tgtatataga agaatagtag aagtatttaa tgatatcttg
      781 tgtgttacca tgatttacta ttaggtgctg taaagccata tcccgatctt atactaattt
      841 atggtcatgc gaggtgccat cttggttttc gagcatggcg aattcgtaac accgagattg
      901 tgcaagccta ctttatcctt ttgttttctg cttccatgat ataagctcat attttttgtt
      961 acgattataa ctaaaatttt gtacaaataa ttttaaaact tgactaaaat cgtaatgtgc
     1021 aattttcttg gaagttccaa aattgaaatt attgcagctt ttcatggaag ttgcaatgtt
     1081 caaatatttg caatgctaaa acttcagcat taatattctg agctaccata cctattgtta
     1141 cttgactttt taataatgca gacatatgag acctctgaag tacaagaaat gcggcttgat
     1201 tctgaaagcc attcaaaggt ttactaaagt gaagtaaaac tacggttctt aagattcgag
     1261 tacaagagat gttagatgag ttgatgatat tagaaggagc atatgtaatt gttacattga
     1321 tcaacttcct tctataaatt attcacttta cagtggtatt aagatacggt tgtgtgttgt
     1381 ttaataggag tatctaatag aggaactata taggtggacc ggttttcttt agttagttca
     1441 agtgatatcg agtctaaatg ttaaatgtgt caaataatgt ttgatttgta tatgttttct
     1501 ttgttggaag ca
//
LOCUS       XR_011757365            1217 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840345), transcript variant X1, ncRNA.
ACCESSION   XR_011757365
VERSION     XR_011757365.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1217
                     /gene="LOC139840345"
                     /note="uncharacterized LOC139840345; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840345"
     ncRNA           1..1217
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840345"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840345"
ORIGIN      
        1 tccataaact gaatcatgta tggagatcat cgattaaacg atctgatcca ttaaaaatga
       61 atattgtatc gatggacgaa ctcgattcaa aagattcatg tctttgattc atctatatcg
      121 atcaaatctt catcatcatt tagatacaaa aaatcaacat tttgttacaa caatgaggtg
      181 gattttagat gaaatcgcac cagtttcatc catcgatttc gtgtcagtaa ggggatacat
      241 atgacgagaa acagggactc aaaaatcaac atgctacaat gaggaaactg aagaaaaaga
      301 caaatctgat cgacaaggac gagaagaaaa aagtttgtgc aagccttgaa gaaaaaagct
      361 cacaaacagt ttaagtaaat atcatgcgaa atggtttaaa gattgtgagc acattagtct
      421 ttgtgaactg tctcctacta aggtcggcat tgattttgtg aatgcaacaa tcatcgcgtt
      481 acggatttat aattgaatgt gagatatctt atcatgggct tgcacaaagt gttccatttt
      541 tgcagttgga ggagaatggc attaatctcg atattcatgt attcaaagtt caatttacac
      601 ggtatttgta atggggtact caatagaaat ctcgacccat taagagataa atcaaacgtg
      661 aacggatcaa cttctcacct tggcccattc cattttgggt cttattgtaa atctttagct
      721 tcatatgcaa tacacaccga ctactggtgc tattgctcct ggtgcttaca cactcctaga
      781 tgcgacaaat tctaatcaaa aagttgttat gttgccacat tcactggtca taatcataaa
      841 ggtgggcact cgattgacac tcttgaggta catcatggag tacttgacat ctaatacaat
      901 cgtatttgcg tttttaatta tttgatatac aatagtacga gacatacaaa ccagtttgtg
      961 gaaactaacc atgtattata catacattca gtatttgtac ctgtcttcaa tactaacgtt
     1021 ttagaatact aaattttaaa actgccgtgc aacgtacggg ctcttacagg gacttgaaag
     1081 ctctgttggc ctcacgctcc aaaatgatgg cgtcttgacg tcctcctggg gatttgtatc
     1141 atatgaatga ataagtaatt gtgcgacact gaatgtgaac tattgattct tgcattttaa
     1201 ttatattcaa tactaaa
//
LOCUS       XR_011757366            1231 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840345), transcript variant X2, ncRNA.
ACCESSION   XR_011757366
VERSION     XR_011757366.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1231
                     /gene="LOC139840345"
                     /note="uncharacterized LOC139840345; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840345"
     ncRNA           1..1231
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840345"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840345"
ORIGIN      
        1 tccataaact gaatcatgta tggagatcat cgattaaacg atctgatcca ttaaaaatga
       61 atattgtatc gatggacgaa ctcgattcaa aagattcatg tctttgattc atctatatcg
      121 atcaaatctt catcatcatt tagatacaaa aaatcaacat tttgttacaa caatgaggtg
      181 gattttagat gaaatcgcac cagtttcatc catcgatttc gtgtcaggct ttatattata
      241 gtaaggggat acatatgacg agaaacaggg actcaaaaat caacatgcta caatgaggaa
      301 actgaagaaa aagacaaatc tgatcgacaa ggacgagaag aaaaaagttt gtgcaagcct
      361 tgaagaaaaa agctcacaaa cagtttaagt aaatatcatg cgaaatggtt taaagattgt
      421 gagcacatta gtctttgtga actgtctcct actaaggtcg gcattgattt tgtgaatgca
      481 acaatcatcg cgttacggat ttataattga atgtgagata tcttatcatg ggcttgcaca
      541 aagtgttcca tttttgcagt tggaggagaa tggcattaat ctcgatattc atgtattcaa
      601 agttcaattt acacggtatt tgtaatgggg tactcaatag aaatctcgac ccattaagag
      661 ataaatcaaa cgtgaacgga tcaacttctc accttggccc attccatttt gggtcttatt
      721 gtaaatcttt agcttcatat gcaatacaca ccgactactg gtgctattgc tcctggtgct
      781 tacacactcc tagatgcgac aaattctaat caaaaagttg ttatgttgcc acattcactg
      841 gtcataatca taaaggtggg cactcgattg acactcttga ggtacatcat ggagtacttg
      901 acatctaata caatcgtatt tgcgttttta attatttgat atacaatagt acgagacata
      961 caaaccagtt tgtggaaact aaccatgtat tatacataca ttcagtattt gtacctgtct
     1021 tcaatactaa cgttttagaa tactaaattt taaaactgcc gtgcaacgta cgggctctta
     1081 cagggacttg aaagctctgt tggcctcacg ctccaaaatg atggcgtctt gacgtcctcc
     1141 tggggatttg tatcatatga atgaataagt aattgtgcga cactgaatgt gaactattga
     1201 ttcttgcatt ttaattatat tcaatactaa a
//
LOCUS       XR_011757367            1015 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840345), transcript variant X3, ncRNA.
ACCESSION   XR_011757367
VERSION     XR_011757367.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1015
                     /gene="LOC139840345"
                     /note="uncharacterized LOC139840345; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840345"
     ncRNA           1..1015
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840345"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840345"
ORIGIN      
        1 tccataaact gaatcatgta tggagatcat cgattaaacg atctgatcca ttaaaaatga
       61 atattgtatc gatggacgaa ctcgattcaa aagattcatg tctttgattc atctatatcg
      121 atcaaatctt catcatcatt tagatacaaa aaatcaacat tttgttacaa caatgaggtg
      181 gattttagat gaaatcgcac cagtttcatc catcgatttc gtgtcagtaa ggggatacat
      241 atgacgagaa acagggactc aaaaatcaac atgctacaat gaggaaactg aagaaaaaga
      301 caaatctgat cgacaaggac gagaagaaaa aagtttgtgc aagccttgaa gaaaaaagct
      361 cacaaacagt ttaagtaaat atcatgcgaa atggtttaaa gattgtgagc acattagtct
      421 ttgtgaactg tctcctacta aggtcggcat tgattttgtg aatgcaacaa tcatcgcgtt
      481 acggatttat aattgaatgt gagatatctt atcatgggct tgcacaaagt gttccatttt
      541 tgcagttgga ggagaatggc attaatctcg atattcatgt attcaaagtt caatttacac
      601 ggtatttgta atggggtact caatagaaat ctcgacccat taagagataa atcaaacgtg
      661 aacggatcaa cttctcacct tggcccattc cattttgggt cttattgtaa atctttagct
      721 tcatatgcaa tacacaccga ctactggtgc tattgctcct ggtgcttaca cactcctaga
      781 tgcgacaaat tctaatcaaa aagttgttat gttgccacat tcactggtca taatcataaa
      841 ggtgggcact cgattgacac tcttgaggga cttgaaagct ctgttggcct cacgctccaa
      901 aatgatggcg tcttgacgtc ctcctgggga tttgtatcat atgaatgaat aagtaattgt
      961 gcgacactga atgtgaacta ttgattcttg cattttaatt atattcaata ctaaa
//
LOCUS       XM_071830611            1138 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein S40-1
            (LOC139840346), mRNA.
ACCESSION   XM_071830611
VERSION     XM_071830611.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1138
                     /gene="LOC139840346"
                     /note="protein S40-1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139840346"
     CDS             86..787
                     /gene="LOC139840346"
                     /codon_start=1
                     /product="protein S40-1"
                     /protein_id="XP_071686712.1"
                     /db_xref="GeneID:139840346"
                     /translation="MEPNGVATYRHRRSPSSDRFLGVFSPPSSSGVISGGSSVAGDDF
                     SEDDVFWTGDFAEQKRQSLDPVKGNNWNSNGNHQSFHNQDKFGILAALPEDNGRKPNN
                     RPVVNRRNPSSLIASPVTPNSSSSRLIPSIPRPNRQERDVSQSMPLKFQQSAPVNVPM
                     FARKPRNGGELADVDIGEDDEEEMLPPHEIVARGSSNSPHTTFSVLEGAGRTLKGRDL
                     RLVRNAVWRRTGFLD"
     misc_feature    212..784
                     /gene="LOC139840346"
                     /note="Senescence regulator; Region: Senescence_reg;
                     pfam04520"
                     /db_xref="CDD:461341"
ORIGIN      
        1 ttattttcta gtgtgtgtgt gtatatatat atatatatat ggttatctct atatctttat
       61 aattatctgt ataatccgaa atccgatgga accgaacggc gttgctacct accgtcaccg
      121 tcgatccccg tcatccgacc gatttttagg tgtattctca ccgccgtcat cttctggcgt
      181 gatatccggt ggatcgtcag tcgccggcga cgatttcagt gaagatgacg tgttctggac
      241 cggcgatttt gccgaacaga agcgtcaatc gttagatccg gtgaaaggaa acaactggaa
      301 ttctaacgga aatcatcaat cgtttcataa tcaggataag tttggaattc tggcggcatt
      361 accggaagat aacggccgca aacctaacaa ccgtccggta gtaaaccgtc ggaaccctag
      421 cagtttaatc gcatctccgg tgacgcctaa ttcatcatcg tcacggttaa ttccgtcaat
      481 tccgagacct aataggcagg aacgagatgt atctcagtct atgcctttga aatttcagca
      541 atcggcgccg gtgaacgttc cgatgtttgc tcggaagccg agaaatggcg gtgaacttgc
      601 tgacgtggat atcggtgaag atgatgaaga ggagatgctt ccgccgcatg aaattgtggc
      661 gcgtggttca tctaattcgc cgcatacgac gttttcggtt ctagaaggtg ctggaaggac
      721 gttgaaaggg agggatcttc ggttagttag gaatgcagtg tggaggagaa caggtttcct
      781 tgattgactg ttgatgattt caggtagttt tgatttgcta ttggactgag aagttggagg
      841 ttttttttct ttaagctttt gcagtctttt gagatatata aatagtgaag taattagttg
      901 gaagtatgtt cttattttgg atgatgatga tgatgatgat gaagttttta acgttgaaat
      961 atgtttcagc attagtagga gttgtttagt gtaatttata ctttatgctg gttttaatgt
     1021 gaataaaatt cgtagcaatc ctatatttgc tgcattttga tatgctttaa aataagagtc
     1081 agtatatgtt acattatgga tatatgagac ttaatatagg gaaatactat gtgaattt
//
LOCUS       XM_071830612             924 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxisome biogenesis
            protein 19-1-like (LOC139840348), transcript variant X1, mRNA.
ACCESSION   XM_071830612
VERSION     XM_071830612.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..924
                     /gene="LOC139840348"
                     /note="peroxisome biogenesis protein 19-1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139840348"
     CDS             113..853
                     /gene="LOC139840348"
                     /codon_start=1
                     /product="peroxisome biogenesis protein 19-1-like isoform
                     X1"
                     /protein_id="XP_071686713.1"
                     /db_xref="GeneID:139840348"
                     /translation="MAEHSDDLDQLLDSALDDFQTLNLASSSQSRDNGADKPEASSLP
                     SGVQGLGMGLPDLRSKSKGKQKVAPKESHASETLNKLREQTRETVKGLESIAGLKLGG
                     VDGFGDDKMMEDLVKQFEELAKSQDMESIVETMMQQLLSKEVLHEPMKEIGERYPKWL
                     EENKSKLSQEECNRYFHQYELIRELNIVYDTEPGNFNKIIELMQKMQECGQPPNDIVK
                     ELAPDFDISALGQLSPEMVDAQQNCCIM"
     misc_feature    <335..850
                     /gene="LOC139840348"
                     /note="Pex19 protein family; Region: Pex19; pfam04614"
                     /db_xref="CDD:461367"
     polyA_site      924
                     /gene="LOC139840348"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctcttcaat caccccaaaa ttcccatgta accctctcag caacctacaa tcccaacaga
       61 aaaataaaat agttgtattc tatcaacaga tacaaaccag ggcgaaataa acatggctga
      121 gcattccgac gatttagacc aacttctaga tagtgctttg gatgatttcc aaaccctaaa
      181 tcttgcttct tcttctcaaa gtagagataa cggtgctgac aaacccgagg cttcttcgtt
      241 acccagtggg gttcaaggat tagggatggg tctgcccgat ttgagaagta agagcaaagg
      301 aaagcaaaag gttgcaccaa aagagtcaca tgcttcagag actctcaata agttgaggga
      361 gcagacacgc gagaccgtca agggtttgga atctatcgcc ggtttaaaac taggtggcgt
      421 tgatggattc ggcgatgata aaatgatgga ggatttagtc aaacagtttg aggaacttgc
      481 taagtctcag gacatggagt caatagtaga gacaatgatg cagcagcttt tatccaaaga
      541 agttcttcat gaacccatga aagaaatcgg agaaagatac ccgaaatggt tagaagagaa
      601 taagtctaaa cttagccaag aggaatgcaa tcgttacttt catcagtatg agctcatacg
      661 tgaattaaat atagtttatg atactgagcc tggtaatttc aacaaaatca tagagcttat
      721 gcaaaagatg caagaatgtg gtcaaccacc gaatgatatt gtgaaagaac ttgctcccga
      781 ttttgatata tcagctctcg gtcaactgtc acctgagatg gttgatgctc agcagaactg
      841 ttgtataatg tgagatatag tatgcttact attgtttctt catttacagt gttttttttt
      901 tttttttttt tttttttttt taat
//
LOCUS       XM_071830613             920 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxisome biogenesis
            protein 19-1-like (LOC139840348), transcript variant X2, mRNA.
ACCESSION   XM_071830613
VERSION     XM_071830613.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..920
                     /gene="LOC139840348"
                     /note="peroxisome biogenesis protein 19-1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139840348"
     CDS             112..849
                     /gene="LOC139840348"
                     /codon_start=1
                     /product="peroxisome biogenesis protein 19-2-like isoform
                     X2"
                     /protein_id="XP_071686714.1"
                     /db_xref="GeneID:139840348"
                     /translation="MAEHSDDLDQLLDSALDDFQTLNLASSSQRDNGADKPEASSLPS
                     GVQGLGMGLPDLRSKSKGKQKVAPKESHASETLNKLREQTRETVKGLESIAGLKLGGV
                     DGFGDDKMMEDLVKQFEELAKSQDMESIVETMMQQLLSKEVLHEPMKEIGERYPKWLE
                     ENKSKLSQEECNRYFHQYELIRELNIVYDTEPGNFNKIIELMQKMQECGQPPNDIVKE
                     LAPDFDISALGQLSPEMVDAQQNCCIM"
     misc_feature    <331..846
                     /gene="LOC139840348"
                     /note="Pex19 protein family; Region: Pex19; pfam04614"
                     /db_xref="CDD:461367"
     polyA_site      920
                     /gene="LOC139840348"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcttcaatc accccaaaat tcccatgtaa ccctctcagc aacctacaat cccaacagaa
       61 aaataaaata gttgtattct atcaacagat acaaaccagg gcgaaataaa catggctgag
      121 cattccgacg atttagacca acttctagat agtgctttgg atgatttcca aaccctaaat
      181 cttgcttctt cttctcaaag agataacggt gctgacaaac ccgaggcttc ttcgttaccc
      241 agtggggttc aaggattagg gatgggtctg cccgatttga gaagtaagag caaaggaaag
      301 caaaaggttg caccaaaaga gtcacatgct tcagagactc tcaataagtt gagggagcag
      361 acacgcgaga ccgtcaaggg tttggaatct atcgccggtt taaaactagg tggcgttgat
      421 ggattcggcg atgataaaat gatggaggat ttagtcaaac agtttgagga acttgctaag
      481 tctcaggaca tggagtcaat agtagagaca atgatgcagc agcttttatc caaagaagtt
      541 cttcatgaac ccatgaaaga aatcggagaa agatacccga aatggttaga agagaataag
      601 tctaaactta gccaagagga atgcaatcgt tactttcatc agtatgagct catacgtgaa
      661 ttaaatatag tttatgatac tgagcctggt aatttcaaca aaatcataga gcttatgcaa
      721 aagatgcaag aatgtggtca accaccgaat gatattgtga aagaacttgc tcccgatttt
      781 gatatatcag ctctcggtca actgtcacct gagatggttg atgctcagca gaactgttgt
      841 ataatgtgag atatagtatg cttactattg tttcttcatt tacagtgttt tttttttttt
      901 tttttttttt tttttttaat
//
LOCUS       XM_071830614            1755 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-fructofuranosidase,
            insoluble isoenzyme 3-like (LOC139840349), mRNA.
ACCESSION   XM_071830614
VERSION     XM_071830614.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1755
                     /gene="LOC139840349"
                     /note="beta-fructofuranosidase, insoluble isoenzyme
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 30 Proteins"
                     /db_xref="GeneID:139840349"
     CDS             1..1755
                     /gene="LOC139840349"
                     /codon_start=1
                     /product="beta-fructofuranosidase, insoluble isoenzyme
                     3-like"
                     /protein_id="XP_071686715.1"
                     /db_xref="GeneID:139840349"
                     /translation="MEICRIVFKVLVCWFPVIFIHFDGGVMGFHNIYPEYQSLTAVKV
                     NHSHKPVYHFQPKQNWINDPNAPMYYKGFYHLFYQYNPKGAVWGNIVWAHSVSKDMIN
                     WIPLKPAMVPSEWFDKYGCWSGSATILPGDKPLILYTGVVNPKPEPGYQVQNYAIPAN
                     YSDPYLQDWVKPKNNPIIKPTKENVSAFRDPTTAWKVNGQWEMTLGSKVDMVGVSYLY
                     RSPDFIKWTLVDHPLHQKENVGMWECPDFYPVSVKGDKGLDTTVTEGDIKHVFKVSLD
                     STRYDTYTIGKYDTKNDRYIPDEGMIDSWASLRYDWGNFYASKSFFDPSKHRRIIWGW
                     ANESSTKTESVRKGWAGIQLIPRTVWLDPSGKQLLQWPVTELETLRGKHVKLINEVLE
                     QGDKIEVRGITAAQADVDVVFRFRGLDKAEEYDTKWDKLFPPETLAKSICHMMGTTKQ
                     GGLGPFGLLTLTSKDFEEYTPVFFRVFNTQDNTKHKVLMCSDAFPSTLNHEEYRPSFG
                     GFVDVDLSENKISLRSLIDHSVVESFGAEGKTVITSRVYPTLAVGDKVHLHVFNNGTE
                     AVTVEKLDAWSMKEPRMN"
     misc_feature    157..1614
                     /gene="LOC139840349"
                     /note="Glycosyl hydrolases family 32; Region: Glyco_32;
                     smart00640"
                     /db_xref="CDD:214757"
ORIGIN      
        1 atggagattt gccgaatagt gtttaaggtt ttggtgtgtt ggttcccagt aatcttcatt
       61 cattttgatg gtggagttat gggtttccat aatatttatc ctgaatacca gtcattaact
      121 gctgttaaag tcaatcactc tcataagcct gtttaccatt ttcaacctaa acaaaactgg
      181 atcaacgacc caaatgcacc aatgtattac aaaggatttt accatctgtt ttatcagtac
      241 aacccgaaag gagcagtatg gggcaacatt gtgtgggccc actcagtctc aaaggacatg
      301 atcaactgga ttccgttaaa acccgcaatg gtaccatcag aatggtttga caagtacggg
      361 tgttggtccg ggtcagccac aattctcccg ggagacaaac cactcatact atatactgga
      421 gtggtaaacc caaagcccga accaggttac caagtccaga attacgctat accagctaat
      481 tactcagacc catatcttca agattgggtc aaacccaaaa acaatcccat aatcaaacca
      541 acaaaagaaa acgtgtcagc gtttcgtgac cccacaacag cctggaaagt caacggtcaa
      601 tgggaaatga ctcttggtag taaagtcgat atggtaggcg tatcgtattt gtaccgaagc
      661 cccgatttta tcaagtggac tttggttgac cacccgttgc accaaaaaga aaacgtaggc
      721 atgtgggaat gtcccgattt ttatcctgta tcggttaaag gagacaaggg tttggatact
      781 actgtaacag agggtgatat caaacatgtt tttaaggtga gccttgatag tactagatac
      841 gatacgtata caatcgggaa gtatgatacg aagaatgata gatacatccc tgatgaagga
      901 atgatcgata gttgggcgag tttaagatac gattggggga acttttatgc ctctaaatca
      961 ttttttgacc cgtcaaagca tcggaggatc atttggggtt gggctaacga atctagcact
     1021 aaaacagaaa gtgtcagaaa aggatgggca ggaatccagt taattccaag aactgtttgg
     1081 ttggacccgt ctggaaaaca actgctacaa tggcctgtta ctgaattaga aaccctaaga
     1141 ggaaagcatg tgaaacttat caatgaggta ctcgaacaag gagataagat tgaagttagg
     1201 ggaatcactg ctgcacaggc ggatgtggat gtggtattta ggtttcgagg cctggataaa
     1261 gccgaagagt atgataccaa atgggataaa ttattcccac ctgaaactct tgcgaaaagt
     1321 atctgtcaca tgatgggtac aaccaaacaa ggcggattag ggccatttgg tcttttaaca
     1381 ttgacctcga aagattttga agaatacact cctgtctttt ttagagtttt caacactcaa
     1441 gataatacta agcataaagt tcttatgtgc tccgatgcct ttccgtcaac attgaaccac
     1501 gaagaatacc ggccatcatt tggaggtttt gtggatgtag atttatctga aaacaagatt
     1561 tcacttagga gtttgattga tcattcagtt gtggaaagct ttggggcaga gggtaaaacg
     1621 gtaataacat ccagggttta tcccacattg gcggttggtg acaaagtaca tctgcatgta
     1681 tttaacaacg gtactgaggc agtcaccgtt gagaaacttg atgcgtggtc tatgaaggag
     1741 cctagaatga actaa
//
LOCUS       XM_071830616            2464 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840350), transcript variant X1, mRNA.
ACCESSION   XM_071830616
VERSION     XM_071830616.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2464
                     /gene="LOC139840350"
                     /note="uncharacterized LOC139840350; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840350"
     CDS             475..1935
                     /gene="LOC139840350"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686717.1"
                     /db_xref="GeneID:139840350"
                     /translation="MTSSLIHKPPHESDKPFATSLYESFQLLKPQLKPPFSLAILTQP
                     QYLNLNSALLYAILTCEPHHVKIHLKHLHGIVTDGYSLFTSLVTKLVNELYQNLVENV
                     KLQLIWVVSELIDVNAVGVEGLLVALLRQTRGGDFSDGNLWLCSELVGIFLVKWECLV
                     ENEAFVVSCGLFVFLRLLGDHCRVSLNTKVEALKRKEIEFCVRVFKEEFRLCLKFGRD
                     LVRLLQDLAHVPEFRDIWKDLLLHPNRFKTFGFYDILQLYQLRTSSRYFLLRISPEME
                     THLRFLLTHVKLGSQMRYQIWFRKKFINENESVLIDIVRFVCCAHHPSNKVILSNVTP
                     RWAVIGWLLKCCSKNHVEANVKLALFYDWLFFNKEVDNVMNIEPGILLMINSVPKYAD
                     MTNNLLEFLFLLMDHYDIEKKDLIFKGVSSALDVVERKGVVQSFDALTNCGVIYPFLK
                     ERFAKMLPNKNVSKLPTKTGDLVACTLTRSLQNSVN"
     misc_feature    607..1839
                     /gene="LOC139840350"
                     /note="Integrator complex subunit 3 N-terminal; Region:
                     Ints3_N; pfam10189"
                     /db_xref="CDD:431123"
ORIGIN      
        1 cgtatttacc ttctcacttt ctcagtcttt cacgactcct tttctcatca ggccacttca
       61 tcgtaaaaca tcccactgcc tcttttttca tctatctgtt attcatcacc ttatgtttaa
      121 tcggacctgc agcgtttcag ttcgattgtc ttaggtgtca gtagaaaatt ggtgccaaaa
      181 ccagcagtag ttttgcttaa tttctggaat tagttcacac ttagctgccg gcaatgttgt
      241 ttaggattta aaaccctaaa accctcacaa cacaagtccg atcgccgatc acctccgtcg
      301 tccgccgtct agaccgtcac cggtctggtt atcccgattt taccagcggt ttcttttcta
      361 catccccgct atttaacaca tggtaaacac attaatttat cttacaattt cacaatcatt
      421 ttaaatttta attaaattaa ataatactta aattttttaa ttttattcac ccatatgaca
      481 tctagtctga ttcacaaacc ccctcacgaa tccgacaaac catttgctac atctttatac
      541 gaatcttttc aactcctaaa accccaatta aaacccccat tttcactagc gattttaaca
      601 caaccccaat acctaaatct caattctgct ttattatatg ctattctaac gtgcgaaccg
      661 catcatgtta aaattcattt gaaacactta catggaattg taactgatgg atatagttta
      721 ttcacttctc tagttactaa attagtcaat gaactgtatc aaaacctagt tgaaaatgtg
      781 aaacttcagt tgatatgggt tgtttcggaa ctaatcgatg tgaatgcggt tggggttgag
      841 ggtttgttgg tggcgttgtt gcggcaaaca cgtggtggtg attttagtga tgggaattta
      901 tggttgtgtt cggagttagt tgggattttt ttagttaaat gggagtgttt ggttgaaaac
      961 gaggcgtttg tggtatcttg cgggttgttt gtttttctta ggttgttagg tgatcattgt
     1021 agagttagtt tgaatacgaa agttgaggcc ttgaagcgaa aagaaattga gttttgtgtt
     1081 cgtgttttta aggaggagtt tcgtttgtgt ttgaaattcg ggcgggattt ggttaggttg
     1141 ttgcaagatt tagctcatgt ccccgagttt cgagatatat ggaaagatct tttattgcat
     1201 ccaaatcgct ttaaaacgtt tggtttttat gatattttgc aattgtacca attgaggaca
     1261 tctagtcgat atttcttact tcgtattagt cccgagatgg aaactcactt gcggtttttg
     1321 cttacacatg tcaaactagg aagtcaaatg cggtaccaaa tatggtttag gaagaagttt
     1381 attaacgaga acgagagtgt attgattgat attgtgcggt ttgtttgttg tgcacatcac
     1441 ccgtctaaca aagtgatctt atcgaatgtg actcctagat gggcggttat tggttggtta
     1501 cttaaatgtt gtagtaagaa tcatgttgaa gctaatgtga agctagcctt gttttacgat
     1561 tggttatttt ttaataagga agttgataac gtgatgaata tcgagcctgg tattttattg
     1621 atgataaact ctgtacctaa atatgctgat atgactaata atcttttgga gtttttattc
     1681 ttgttgatgg atcattatga cattgagaag aaagatttga tttttaaggg tgtatcatcg
     1741 gctcttgatg tggttgaaag aaaaggggtt gttcagtcat ttgacgcttt gactaattgt
     1801 ggtgtgattt atccttttct taaggagaga tttgctaaaa tgttgccaaa caagaatgtg
     1861 agcaagttgc cgaccaaaac gggtgattta gttgcttgca ccttgacccg gagtctgcaa
     1921 aattcagtta attaagcggt tatgaatgat ccggaaagtt tagttaagga aattgatgtg
     1981 aaacgggtca aaaaaatgac ggaagatggt aaaattccag gtgggatgat tcctaaagta
     2041 aaatgttgtg tgaaatcgtt gtcacaaggg gttaaaactg cgagtattat cgttgggcgg
     2101 ttggagtatt cgttgtttct cgaggttctt actgatgaag gggctggaac tatgattacc
     2161 ggtggtcgtg ccctgcgtcc attgtggaac aatggtgaag aaaaagaaaa atccagacac
     2221 ggaaactagg gttttaagaa gtcgtagtat cagtattgtt aatcctggtg agtgtgagcg
     2281 taaggatggt gactctgagg aatcatctga ttcggaacac tcggttaatc aggactgtct
     2341 atcccggttg ggatcgcctg ataaacatcc tactattaat gacaataagg agatgaagga
     2401 taagatgagc ggtgctaaga gtgcacctaa tgatacggct gcagaagaac tgattgaggt
     2461 taat
//
LOCUS       XM_071830617            2255 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840350), transcript variant X2, mRNA.
ACCESSION   XM_071830617
VERSION     XM_071830617.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2255
                     /gene="LOC139840350"
                     /note="uncharacterized LOC139840350; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840350"
     CDS             475..1935
                     /gene="LOC139840350"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686718.1"
                     /db_xref="GeneID:139840350"
                     /translation="MTSSLIHKPPHESDKPFATSLYESFQLLKPQLKPPFSLAILTQP
                     QYLNLNSALLYAILTCEPHHVKIHLKHLHGIVTDGYSLFTSLVTKLVNELYQNLVENV
                     KLQLIWVVSELIDVNAVGVEGLLVALLRQTRGGDFSDGNLWLCSELVGIFLVKWECLV
                     ENEAFVVSCGLFVFLRLLGDHCRVSLNTKVEALKRKEIEFCVRVFKEEFRLCLKFGRD
                     LVRLLQDLAHVPEFRDIWKDLLLHPNRFKTFGFYDILQLYQLRTSSRYFLLRISPEME
                     THLRFLLTHVKLGSQMRYQIWFRKKFINENESVLIDIVRFVCCAHHPSNKVILSNVTP
                     RWAVIGWLLKCCSKNHVEANVKLALFYDWLFFNKEVDNVMNIEPGILLMINSVPKYAD
                     MTNNLLEFLFLLMDHYDIEKKDLIFKGVSSALDVVERKGVVQSFDALTNCGVIYPFLK
                     ERFAKMLPNKNVSKLPTKTGDLVACTLTRSLQNSVN"
     misc_feature    607..1839
                     /gene="LOC139840350"
                     /note="Integrator complex subunit 3 N-terminal; Region:
                     Ints3_N; pfam10189"
                     /db_xref="CDD:431123"
ORIGIN      
        1 cgtatttacc ttctcacttt ctcagtcttt cacgactcct tttctcatca ggccacttca
       61 tcgtaaaaca tcccactgcc tcttttttca tctatctgtt attcatcacc ttatgtttaa
      121 tcggacctgc agcgtttcag ttcgattgtc ttaggtgtca gtagaaaatt ggtgccaaaa
      181 ccagcagtag ttttgcttaa tttctggaat tagttcacac ttagctgccg gcaatgttgt
      241 ttaggattta aaaccctaaa accctcacaa cacaagtccg atcgccgatc acctccgtcg
      301 tccgccgtct agaccgtcac cggtctggtt atcccgattt taccagcggt ttcttttcta
      361 catccccgct atttaacaca tggtaaacac attaatttat cttacaattt cacaatcatt
      421 ttaaatttta attaaattaa ataatactta aattttttaa ttttattcac ccatatgaca
      481 tctagtctga ttcacaaacc ccctcacgaa tccgacaaac catttgctac atctttatac
      541 gaatcttttc aactcctaaa accccaatta aaacccccat tttcactagc gattttaaca
      601 caaccccaat acctaaatct caattctgct ttattatatg ctattctaac gtgcgaaccg
      661 catcatgtta aaattcattt gaaacactta catggaattg taactgatgg atatagttta
      721 ttcacttctc tagttactaa attagtcaat gaactgtatc aaaacctagt tgaaaatgtg
      781 aaacttcagt tgatatgggt tgtttcggaa ctaatcgatg tgaatgcggt tggggttgag
      841 ggtttgttgg tggcgttgtt gcggcaaaca cgtggtggtg attttagtga tgggaattta
      901 tggttgtgtt cggagttagt tgggattttt ttagttaaat gggagtgttt ggttgaaaac
      961 gaggcgtttg tggtatcttg cgggttgttt gtttttctta ggttgttagg tgatcattgt
     1021 agagttagtt tgaatacgaa agttgaggcc ttgaagcgaa aagaaattga gttttgtgtt
     1081 cgtgttttta aggaggagtt tcgtttgtgt ttgaaattcg ggcgggattt ggttaggttg
     1141 ttgcaagatt tagctcatgt ccccgagttt cgagatatat ggaaagatct tttattgcat
     1201 ccaaatcgct ttaaaacgtt tggtttttat gatattttgc aattgtacca attgaggaca
     1261 tctagtcgat atttcttact tcgtattagt cccgagatgg aaactcactt gcggtttttg
     1321 cttacacatg tcaaactagg aagtcaaatg cggtaccaaa tatggtttag gaagaagttt
     1381 attaacgaga acgagagtgt attgattgat attgtgcggt ttgtttgttg tgcacatcac
     1441 ccgtctaaca aagtgatctt atcgaatgtg actcctagat gggcggttat tggttggtta
     1501 cttaaatgtt gtagtaagaa tcatgttgaa gctaatgtga agctagcctt gttttacgat
     1561 tggttatttt ttaataagga agttgataac gtgatgaata tcgagcctgg tattttattg
     1621 atgataaact ctgtacctaa atatgctgat atgactaata atcttttgga gtttttattc
     1681 ttgttgatgg atcattatga cattgagaag aaagatttga tttttaaggg tgtatcatcg
     1741 gctcttgatg tggttgaaag aaaaggggtt gttcagtcat ttgacgcttt gactaattgt
     1801 ggtgtgattt atccttttct taaggagaga tttgctaaaa tgttgccaaa caagaatgtg
     1861 agcaagttgc cgaccaaaac gggtgattta gttgcttgca ccttgacccg gagtctgcaa
     1921 aattcagtta attaagcggt tatgaatgat ccggaaagtt tagttaagga aattgatgtg
     1981 aaacgggtca aaaaaatgac ggaagatggt aaaattccag gtgggatgat tcctaaagta
     2041 aaatgttgtg tgaaatcgtt gtcacaaggg gttaaaactg cgagtattat cgttgggcgg
     2101 ttggagtatt cgttgtttct cgaggttctt actgatgaag gggctggaac tatgattacc
     2161 gggaaacata attgtgacac atattgtgac ctgacattaa caaatttgta aaagaattcg
     2221 actactttgg aaacttttca aaaggttgca attgt
//
LOCUS       XM_071830618             959 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA-directed RNA polymerase
            V subunit 7-like (LOC139840351), transcript variant X1, mRNA.
ACCESSION   XM_071830618
VERSION     XM_071830618.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..959
                     /gene="LOC139840351"
                     /note="DNA-directed RNA polymerase V subunit 7-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins"
                     /db_xref="GeneID:139840351"
     CDS             175..705
                     /gene="LOC139840351"
                     /codon_start=1
                     /product="DNA-directed RNA polymerase V subunit 7-like"
                     /protein_id="XP_071686719.1"
                     /db_xref="GeneID:139840351"
                     /translation="MFLKVQLNWNVVIPAENLDIKGLMLQKAILVRLLDDFSVKKATK
                     DYGYLLAVTTLDKIGEGKVREHSGDVLFPVSFTCLSFKVFRGEVVEGVVHKILKHGVF
                     MRCGPIENLYLSNQKMSDYKFQQAESSCFLNGKTGSRIEKDVTVRCVVIGVKYMEAQK
                     EFQAVVGLEGDHLGPV"
     misc_feature    199..378
                     /gene="LOC139840351"
                     /note="SHS2 domain found in N terminus of
                     Rpb7p/Rpc25p/MJ0397; Region: SHS2_Rpb7-N; pfam03876"
                     /db_xref="CDD:427560"
     misc_feature    <295..702
                     /gene="LOC139840351"
                     /note="DNA-directed RNA polymerase II subunit 7;
                     Provisional; Region: PTZ00162"
                     /db_xref="CDD:240298"
ORIGIN      
        1 ccacgcatgt ccgtgacgct acctactgct gtactaaacc atccctgcta ttacaagcag
       61 ttcgtaaacc ccaaattcag tagccgattc tccaaattca gtggctgatt aaagaaaaag
      121 gcacacctac acaacaccct acttaattac ggagtatcaa tttcttgtcc gatcatgttt
      181 ctcaaggtac agttgaactg gaacgtggtc ataccagccg aaaatcttga catcaagggc
      241 ttgatgttac agaaggcgat actggttcgt ttattggacg atttctcagt caaaaaagca
      301 accaaagact atggatacct tcttgcagtg accacattgg acaaaattgg agaaggtaaa
      361 gtaagggaac actcgggtga cgtgctattt ccagtcagct ttacttgctt gagcttcaag
      421 gtctttcggg gggaagttgt ggaaggagtt gttcacaaaa ttttaaagca tggggttttt
      481 atgagatgtg ggcccattga gaacctttat ctatctaacc agaaaatgag tgattacaag
      541 tttcagcaag cggaaagttc ttgttttctt aatggaaaga cggggtcgag aatcgagaag
      601 gatgtgactg tgaggtgtgt tgtgattggg gtcaagtata tggaggctca gaaggagttt
      661 caggctgttg ttgggttaga aggagatcac ttgggcccgg tttagtagtt aagcttgaag
      721 aacgatgatg ggtcaggggg ttttgaagat tgctgatctt ggtgatgcaa ggaagtttgt
      781 ttagtttaag ttttaatctc tcgtttattg aatccatgat tattgtatag ttcgacttct
      841 catcttagtt aacaaatgtc gttaaaaagt ttgtaatcat tatcatgaat catgattaat
      901 attgtactaa atatttgcta gtttttttag ttgcggtcat gtcatgatat aatgattta
//
LOCUS       XM_071830619             965 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA-directed RNA polymerase
            V subunit 7-like (LOC139840351), transcript variant X2, mRNA.
ACCESSION   XM_071830619
VERSION     XM_071830619.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..965
                     /gene="LOC139840351"
                     /note="DNA-directed RNA polymerase V subunit 7-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins"
                     /db_xref="GeneID:139840351"
     CDS             180..710
                     /gene="LOC139840351"
                     /codon_start=1
                     /product="DNA-directed RNA polymerase V subunit 7-like"
                     /protein_id="XP_071686720.1"
                     /db_xref="GeneID:139840351"
                     /translation="MFLKVQLNWNVVIPAENLDIKGLMLQKAILVRLLDDFSVKKATK
                     DYGYLLAVTTLDKIGEGKVREHSGDVLFPVSFTCLSFKVFRGEVVEGVVHKILKHGVF
                     MRCGPIENLYLSNQKMSDYKFQQAESSCFLNGKTGSRIEKDVTVRCVVIGVKYMEAQK
                     EFQAVVGLEGDHLGPV"
     misc_feature    204..383
                     /gene="LOC139840351"
                     /note="SHS2 domain found in N terminus of
                     Rpb7p/Rpc25p/MJ0397; Region: SHS2_Rpb7-N; pfam03876"
                     /db_xref="CDD:427560"
     misc_feature    <300..707
                     /gene="LOC139840351"
                     /note="DNA-directed RNA polymerase II subunit 7;
                     Provisional; Region: PTZ00162"
                     /db_xref="CDD:240298"
ORIGIN      
        1 cccacgcatg tccgtgacgc tacctactgc tgtactaaac catccctgct attacaagca
       61 gttcgtaaac cccaaattca gtagccgatt ctccaaattc agtggctgat taaagaaaaa
      121 ggcacaccta cacaacaccc tacttaatta cggagtatca atttcttgtc cgacagatca
      181 tgtttctcaa ggtacagttg aactggaacg tggtcatacc agccgaaaat cttgacatca
      241 agggcttgat gttacagaag gcgatactgg ttcgtttatt ggacgatttc tcagtcaaaa
      301 aagcaaccaa agactatgga taccttcttg cagtgaccac attggacaaa attggagaag
      361 gtaaagtaag ggaacactcg ggtgacgtgc tatttccagt cagctttact tgcttgagct
      421 tcaaggtctt tcggggggaa gttgtggaag gagttgttca caaaatttta aagcatgggg
      481 tttttatgag atgtgggccc attgagaacc tttatctatc taaccagaaa atgagtgatt
      541 acaagtttca gcaagcggaa agttcttgtt ttcttaatgg aaagacgggg tcgagaatcg
      601 agaaggatgt gactgtgagg tgtgttgtga ttggggtcaa gtatatggag gctcagaagg
      661 agtttcaggc tgttgttggg ttagaaggag atcacttggg cccggtttag tagttaagct
      721 tgaagaacga tgatgggtca gggggttttg aagattgctg atcttggtga tgcaaggaag
      781 tttgtttagt ttaagtttta atctctcgtt tattgaatcc atgattattg tatagttcga
      841 cttctcatct tagttaacaa atgtcgttaa aaagtttgta atcattatca tgaatcatga
      901 ttaatattgt actaaatatt tgctagtttt tttagttgcg gtcatgtcat gatataatga
      961 tttat
//
LOCUS       XR_011757368            1594 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840352), transcript variant X1, misc_RNA.
ACCESSION   XR_011757368
VERSION     XR_011757368.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1594
                     /gene="LOC139840352"
                     /note="uncharacterized LOC139840352; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840352"
     misc_RNA        1..1594
                     /gene="LOC139840352"
                     /product="uncharacterized protein, transcript variant X1"
                     /db_xref="GeneID:139840352"
ORIGIN      
        1 gtgctcaata tctctctctt cttcatcgct ctcaacctac attagaaaac cgcatcggtc
       61 tctttaattc atatttgaat tttgaagggt taatcaaaat tagggtttcc ttaatcaatt
      121 tgtttcattg attacttcaa tggcgtcctc aatcatgttt ttcagctctc acgactttga
      181 atcgatttct tcaatcctca aggaatccga acccggcgat ccttcacatc caactcatat
      241 acaaggattg aacgtattgg acattcataa tcttcttcta ttacttcaca attgggtttt
      301 cttcttcctc gcatcaaatt tcctgtttgc ttcaatttct cttatatttc tgctgcttgc
      361 gttgatttta agcttcaaat tggaacaaaa aaaatcatct tctttgacgc tcactatgtg
      421 ttcgatgaaa tgattgagag aagtttgact ataggcatgt gtaaggtgat gccgaaagct
      481 gggcccacag tcccatctac tgcgacatcg atggaagctg cgaaagtggc atcttctccc
      541 aaagtggagg ttgctactga tcttttcgaa gaaaccgttt tcatacgatt cgcactaaag
      601 aataccattt cagtcagacc catgaacaag aaattcagaa tatgccaaat cacctccatg
      661 aacgttggtt ttacggtcac aattacagtg tcacttgcag atgggtgtga atctgtgggt
      721 tttacagtca caattacagg agtattgaac aaaatgaagc tgaattatga attcagaagg
      781 ttgaaaatgt actttttaag gctgcaaagc ctttgtctta aactctgtat ccgtctcagc
      841 atgtggcaaa taggattgct gatctgaaaa aggtatttct aaaaataatt atacaaaaga
      901 gggtctaaat acaagtgata aaattcagct cttcttagta cattcaggta cctttcaaag
      961 aagaaagatt agagtaaaag tgtagcgtag cttttctagg gtcacatttt aatcacattt
     1021 ttttcctttt acctatattt atgttctttg tgtctttaat tagttttgta atgttgttgt
     1081 tttaggtgat tcagctccag atcgattacg gcttctgtga agaatgttgg gttgacttgg
     1141 agacatgtat tggcttctta tcgagatatc gatgttgagg taaaacggta aaacaacatg
     1201 tcgtgcgacc attaatccaa gtgaggtcca ttcgggtgat tttttagctg tgtcaaagat
     1261 ccgcggacga tggggcgggt ttgaaacatt ggagaaatgg ttacgggtgc gtttgcgggt
     1321 catacggctg tttgtatgaa ggatgatgtc ggaaatcttt gggttgggga atcgggtcac
     1381 gagaatgaaa aggtaaaggt gtttataaaa taattctatc gtatctgaat ttacgcatgg
     1441 tttagtaatc ttggagaaat aaagaaatcg agtcgaccca tcgttaacac ccctgttagt
     1501 ctcatttaat catattgcat tggatatatt catgtcactg tcttagtcat tctttttttt
     1561 ttttttagta ttaaccatcc ttggtcattc tttt
//
LOCUS       XR_011757369            1381 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840352), transcript variant X2, misc_RNA.
ACCESSION   XR_011757369
VERSION     XR_011757369.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1381
                     /gene="LOC139840352"
                     /note="uncharacterized LOC139840352; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840352"
     misc_RNA        1..1381
                     /gene="LOC139840352"
                     /product="uncharacterized protein, transcript variant X2"
                     /db_xref="GeneID:139840352"
ORIGIN      
        1 gtgctcaata tctctctctt cttcatcgct ctcaacctac attagaaaac cgcatcggtc
       61 tctttaattc atatttgaat tttgaagggt taatcaaaat tagggtttcc ttaatcaatt
      121 tgtttcattg attacttcaa tggcgtcctc aatcatgttt ttcagctctc acgactttga
      181 atcgatttct tcaatcctca aggaatccga acccggcgat ccttcacatc caactcatat
      241 acaaggattg aacgtattgg acattcataa tcttcttcta ttacttcaca attgggtttt
      301 cttcttcctc gcatcaaatt tcctgtttgc ttcaatttct cttatatttc tgctgcttgc
      361 gttgatttta agcttcaaat tggaacaaaa aaaatcatct tctttgacgc tcactatgtg
      421 ttcgatgaaa tgattgagag aagtttgact ataggcatgt gtaaggtgat gccgaaagct
      481 gggcccacag tcccatctac tgcgacatcg atggaagctg cgaaagtggc atcttctccc
      541 aaagtggagg ttgctactga tcttttcgaa gaaaccgttt tcatacgatt cgcactaaag
      601 aataccattt cagtcagacc catgaacaag aaattcagaa tatgccaaat cacctccatg
      661 aacgttggtt ttacggtcac aattacagtg tcacttgcag atgggtgtga atctgtgggt
      721 tttacagtca caattacagg agtattgaac aaaatgaagc tgaattatga attcagaagg
      781 ttgaaaatgt actttttaag gctgcaaagc ctttgtctta aactctgtat ccgtctcagc
      841 atgtggcaaa taggattgct gatctgaaaa aggtgattca gctccagatc gattacggct
      901 tctgtgaaga atgttgggtt gacttggaga catgtattgg cttcttatcg agatatcgat
      961 gttgaggtaa aacggtaaaa caacatgtcg tgcgaccatt aatccaagtg aggtccattc
     1021 gggtgatttt ttagctgtgt caaagatccg cggacgatgg ggcgggtttg aaacattgga
     1081 gaaatggtta cgggtgcgtt tgcgggtcat acggctgttt gtatgaagga tgatgtcgga
     1141 aatctttggg ttggggaatc gggtcacgag aatgaaaagg taaaggtgtt tataaaataa
     1201 ttctatcgta tctgaattta cgcatggttt agtaatcttg gagaaataaa gaaatcgagt
     1261 cgacccatcg ttaacacccc tgttagtctc atttaatcat attgcattgg atatattcat
     1321 gtcactgtct tagtcattct tttttttttt tttagtatta accatccttg gtcattcttt
     1381 t
//
LOCUS       XR_011757370            1586 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840352), transcript variant X3, misc_RNA.
ACCESSION   XR_011757370
VERSION     XR_011757370.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1586
                     /gene="LOC139840352"
                     /note="uncharacterized LOC139840352; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840352"
     misc_RNA        1..1586
                     /gene="LOC139840352"
                     /product="uncharacterized protein, transcript variant X3"
                     /db_xref="GeneID:139840352"
ORIGIN      
        1 gtgctcaata tctctctctt cttcatcgct ctcaacctac attagaaaac cgcatcggtc
       61 tctttaattc atatttgaat tttgaagggt taatcaaaat tagggtttcc ttaatcaatt
      121 tgtttcattg attacttcaa tggcgtcctc aatcatgttt ttcagctctc acgactttga
      181 atcgatttct tcaatcctca aggaatccga acccggcgat ccttcacatc caactcatat
      241 acaaggattg aacgtattgg acattcataa tcttcttcta ttacttcaca attgggtttt
      301 cttcttcctc gcatcaaatt tcctgtttgc ttcaatttct cttatatttc tgctgcttgc
      361 gttgatttta agcttcaaat tggaacaaaa aaaatcatct tctttgacgc tcactatgtg
      421 ttcgatgaaa tgattgagag aagtttgact ataggcatgt gtaaggtgat gccgaaagct
      481 gggcccacag tcccatctac tgcgacatcg atggaagctg cgaaagtggc atcttctccc
      541 aaagtggagg ttgctactga tcttttcgaa gaaaccgttt tcatacgatt cgcactaaag
      601 aataccattt cagtcagacc catgaacaag aaattcagaa tatgccaaat cacctccatg
      661 aacgttggtt ttacggtcac aattacagtg tcacttgcag atgggtgtga atctgtgggt
      721 tttacagtca caattacagg agtattgaac aaaatgaagc tgaattatga attcagaagg
      781 ttgaaaatgt actttttaag gctgcaaagc ctttgtctta aactctgtat ccgtctcagc
      841 atgtggcaaa taggattgct gatctgaaaa aggtatttct aaaaataatt atacaaaaga
      901 gggtctaaat acaagtgata aaattcagct cttcttagta cattcaggta cctttcaaag
      961 aagaaagatt agagtaaaag tgtagcgtag cttttctagg gtcacatttt aatcacattt
     1021 ttttcctttt acctatattt atgttctttg tgtctttaat tagttttgta atgttgttgt
     1081 tttaggtgat tcagctccag atcgattacg gcttctgtga agaatgttgg gttgacttgg
     1141 agacatgtat tggcttctta tcgagatatc gatgttgagg taaaacaaca tgtcgtgcga
     1201 ccattaatcc aagtgaggtc cattcgggtg attttttagc tgtgtcaaag atccgcggac
     1261 gatggggcgg gtttgaaaca ttggagaaat ggttacgggt gcgtttgcgg gtcatacggc
     1321 tgtttgtatg aaggatgatg tcggaaatct ttgggttggg gaatcgggtc acgagaatga
     1381 aaaggtaaag gtgtttataa aataattcta tcgtatctga atttacgcat ggtttagtaa
     1441 tcttggagaa ataaagaaat cgagtcgacc catcgttaac acccctgtta gtctcattta
     1501 atcatattgc attggatata ttcatgtcac tgtcttagtc attctttttt ttttttttag
     1561 tattaaccat ccttggtcat tctttt
//
LOCUS       XR_011757371            1554 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840352), transcript variant X4, misc_RNA.
ACCESSION   XR_011757371
VERSION     XR_011757371.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1554
                     /gene="LOC139840352"
                     /note="uncharacterized LOC139840352; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840352"
     misc_RNA        1..1554
                     /gene="LOC139840352"
                     /product="uncharacterized protein, transcript variant X4"
                     /db_xref="GeneID:139840352"
ORIGIN      
        1 gtgctcaata tctctctctt cttcatcgct ctcaacctac attagaaaac cgcatcggtc
       61 tctttaattc atatttgaat tttgaagggt taatcaaaat tagggtttcc ttaatcaatt
      121 tgtttcattg attacttcaa tggcgtcctc aatcatgttt ttcagctctc acgactttga
      181 atcgatttct tcaatcctca aggaatccga acccggcgat ccttcacatc caactcatat
      241 acaaggattg aacgtattgg acattcataa tcttcttcta ttacttcaca attgggtttt
      301 cttcttcctc gcatcaaatt tcctgtttgc ttcaatttct cttatatttc tgctgcttgc
      361 gttgatttta agcttcaaat tggaacaaaa aaaatcatct tctttgacgc tcactatgtg
      421 ttcgatgaaa tgattgagag aagtttgact ataggcatgt gtaaggtgat gccgaaagct
      481 gggcccacag tcccatctac tgcgacatcg atggaagctg cgaaagtggc atcttctccc
      541 aaagtggagg ttgctactga tcttttcgaa gaaaccgttt tcatacgatt cgcactaaag
      601 aataccattt cagtcagacc catgaacaag aaattcagaa tatgccaaat cacctccatg
      661 aacgttggtt ttacggtcac aattacagtg tcacttgcag atgggtgtga atctgtgggt
      721 tttacagtca caattacagg agtattgaac aaaatgaagc tgaattatga attcagaagg
      781 ttgaaaatgt actttttaag gctgcaaagc ctttgtctta aactctgtat ccgtctcagc
      841 atgtggcaaa taggattgct gatctgaaaa aggtatttct aaaaataatt atacaaaaga
      901 gggtctaaat acaagtgata aaattcagct cttcttagta cattcaggta cctttcaaag
      961 aagaaagatt agagtaaaag tgtagcgtag cttttctagg gtcacatttt aatcacattt
     1021 ttttcctttt acctatattt atgttctttg tgtctttaat tagttttgta atgttgttgt
     1081 tttaggtgat tcagctccag atcgattacg gcttctgtga agaatgttgg gttgacttgg
     1141 agacatgtat tggcttctta tcgagatatc gatgttgagg taaaacggta aaacaacatg
     1201 tcgtgcgacc attaatccaa gtgaggtcca ttcgggtgat tttttagctg tgtcaaagat
     1261 ccgcggacga tggggcgggt ttgaaacatt ggagaaatgg ttacgggtgc gtttgcgggt
     1321 catacggctg tttgtatgaa ggatgatgtc ggaaatcttt gggttgggga atcgggtcac
     1381 gagaatgaaa agtctattct attagacatt gaaactgcag ttattcggtt tttggttgct
     1441 cattgcttat ccagctggga ggtcaaaacg gtaatccttc atggcttcat atatacttga
     1501 aattgtactt gcattttgtt ttttgaaaaa tattacagta gatgtggaaa attc
//
LOCUS       XM_071830620             995 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840352), transcript variant X5, mRNA.
ACCESSION   XM_071830620
VERSION     XM_071830620.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..995
                     /gene="LOC139840352"
                     /note="uncharacterized LOC139840352; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840352"
     CDS             430..867
                     /gene="LOC139840352"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686721.1"
                     /db_xref="GeneID:139840352"
                     /translation="MIERSLTIGMCKVMPKAGPTVPSTATSMEAAKVASSPKVEVATD
                     LFEETVFIRFALKNTISVRPMNKKFRICQITSMNVGFTVTITVSLADGCESVGFTVTI
                     TGVLNKMKLNYEFRRLKMYFLRLQSLCLKLCIRLSMWQIGLLI"
ORIGIN      
        1 gtgctcaata tctctctctt cttcatcgct ctcaacctac attagaaaac cgcatcggtc
       61 tctttaattc atatttgaat tttgaagggt taatcaaaat tagggtttcc ttaatcaatt
      121 tgtttcattg attacttcaa tggcgtcctc aatcatgttt ttcagctctc acgactttga
      181 atcgatttct tcaatcctca aggaatccga acccggcgat ccttcacatc caactcatat
      241 acaaggattg aacgtattgg acattcataa tcttcttcta ttacttcaca attgggtttt
      301 cttcttcctc gcatcaaatt tcctgtttgc ttcaatttct cttatatttc tgctgcttgc
      361 gttgatttta agcttcaaat tggaacaaaa aaaatcatct tctttgacgc tcactatgtg
      421 ttcgatgaaa tgattgagag aagtttgact ataggcatgt gtaaggtgat gccgaaagct
      481 gggcccacag tcccatctac tgcgacatcg atggaagctg cgaaagtggc atcttctccc
      541 aaagtggagg ttgctactga tcttttcgaa gaaaccgttt tcatacgatt cgcactaaag
      601 aataccattt cagtcagacc catgaacaag aaattcagaa tatgccaaat cacctccatg
      661 aacgttggtt ttacggtcac aattacagtg tcacttgcag atgggtgtga atctgtgggt
      721 tttacagtca caattacagg agtattgaac aaaatgaagc tgaattatga attcagaagg
      781 ttgaaaatgt actttttaag gctgcaaagc ctttgtctta aactctgtat ccgtctcagc
      841 atgtggcaaa taggattgct gatctgaaaa aggtgattca gctccagatc gattacggct
      901 tctgtgaagg tacatacatt ttttcctgta ttttaatttc agatgtttgt atcactttta
      961 ttcagtaata tatttctatt ttttgactta cattt
//
LOCUS       XR_011757372            1487 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840352), transcript variant X6, misc_RNA.
ACCESSION   XR_011757372
VERSION     XR_011757372.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1487
                     /gene="LOC139840352"
                     /note="uncharacterized LOC139840352; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840352"
     misc_RNA        1..1487
                     /gene="LOC139840352"
                     /product="uncharacterized protein, transcript variant X6"
                     /db_xref="GeneID:139840352"
ORIGIN      
        1 gtgctcaata tctctctctt cttcatcgct ctcaacctac attagaaaac cgcatcggtc
       61 tctttaattc atatttgaat tttgaagggt taatcaaaat tagggtttcc ttaatcaatt
      121 tgtttcattg attacttcaa tggcgtcctc aatcatgttt ttcagctctc acgactttga
      181 atcgatttct tcaatcctca aggaatccga acccggcgat ccttcacatc caactcatat
      241 acaaggattg aacgtattgg acattcataa tcttcttcta ttacttcaca attgggtttt
      301 cttcttcctc gcatcaaatt tcctgtttgc ttcaatttct cttatatttc tgctgcttgc
      361 gttgatttta agcttcaaat tggaacaaaa aaaatcatct tctttgacgc tcactatgtg
      421 ttcgatgaaa tgattgagag aagtttgact ataggcatgt gtaaggtgat gccgaaagct
      481 gggcccacag tcccatctac tgcgacatcg atggaagctg cgaaagtggc atcttctccc
      541 aaagtggagg ttgctactga tcttttcgaa gaaaccgttt tcatacgatt cgcactaaag
      601 aataccattt cagtcagtgt ataactcaat ggtatgaaat tcaactaatg atcatcccta
      661 tgcacgcact tcatctcctt atgcacgcgc ttcatctttc gaagacccat gaacaagaaa
      721 ttcagaatat gccaaatcac ctccatgaac gttggtttta cggtcacaat tacagtgtca
      781 cttgcagatg ggtgtgaatc tgtgggtttt acagtcacaa ttacagtgag ccaatctata
      841 ccttattctt tgtgtgtaaa aagtcaaaat aagggtcgga tgtaagagaa gcagtatctt
      901 tatattgtgc tttcgacagt aggttaactt aatgcacaac gaataagtaa atgggtcaaa
      961 attatcacct acactataag cctataacaa ctttttatgc aggaaccgct aaataaagat
     1021 tcatgaacag atattcacta tgcaagatgt catctttaca caacctttca tgagtaaatg
     1081 ggtcaacatt atcccctcca ctataagcct ctaataaata tttacgaata actttattgc
     1141 tgcaacatgt agattttctt ttatagtcat gggttgtttc ttctatttta agattaagac
     1201 tttagtgttc tgtatttatt tcactttcag ggagtattga acaaaatgaa gctgaattat
     1261 gaattcagaa ggttgaaaat gtacttttta aggctgcaaa gcctttgtct taaactctgt
     1321 atccgtctca gcatgtggca aataggattg ctgatctgaa aaaggtgatt cagctccaga
     1381 tcgattacgg cttctgtgaa ggtacataca ttttttcctg tattttaatt tcagatgttt
     1441 gtatcacttt tattcagtaa tatatttcta ttttttgact tacattt
//
LOCUS       XR_011757373            1082 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840352), transcript variant X7, misc_RNA.
ACCESSION   XR_011757373
VERSION     XR_011757373.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1082
                     /gene="LOC139840352"
                     /note="uncharacterized LOC139840352; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840352"
     misc_RNA        1..1082
                     /gene="LOC139840352"
                     /product="uncharacterized protein, transcript variant X7"
                     /db_xref="GeneID:139840352"
ORIGIN      
        1 gtgctcaata tctctctctt cttcatcgct ctcaacctac attagaaaac cgcatcggtc
       61 tctttaattc atatttgaat tttgaagggt taatcaaaat tagggtttcc ttaatcaatt
      121 tgtttcattg attacttcaa tggcgtcctc aatcatgttt ttcagctctc acgactttga
      181 atcgatttct tcaatcctca aggaatccga acccggcgat ccttcacatc caactcatat
      241 acaaggattg aacgtattgg acattcataa tcttcttcta ttacttcaca attgggtttt
      301 cttcttcctc gcatcaaatt tcctgtttgc ttcaatttct cttatatttc tgctgcttgc
      361 gttgatttta agcttcaaat tggaacaaaa aaaatcatct tctttgacgc tcactatgtg
      421 ttcgatgaaa tgattgagag aagtttgact ataggcatgt gtaaggtgat gccgaaagct
      481 gggcccacag tcccatctac tgcgacatcg atggaagctg cgaaagtggc atcttctccc
      541 aaagtggagg ttgctactga tcttttcgaa gaaaccgttt tcatacgatt cgcactaaag
      601 aataccattt cagtcagtgt ataactcaat ggtatgaaat tcaactaatg atcatcccta
      661 tgcacgcact tcatctcctt atgcacgcgc ttcatctttc gaagacccat gaacaagaaa
      721 ttcagaatat gccaaatcac ctccatgaac gttggtttta cggtcacaat tacagtgtca
      781 cttgcagatg ggtgtgaatc tgtgggtttt acagtcacaa ttacaggagt attgaacaaa
      841 atgaagctga attatgaatt cagaaggttg aaaatgtact ttttaaggct gcaaagcctt
      901 tgtcttaaac tctgtatccg tctcagcatg tggcaaatag gattgctgat ctgaaaaagg
      961 tgattcagct ccagatcgat tacggcttct gtgaaggtac atacattttt tcctgtattt
     1021 taatttcaga tgtttgtatc acttttattc agtaatatat ttctattttt tgacttacat
     1081 tt
//
LOCUS       XR_011757374             617 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840353), transcript variant X1, ncRNA.
ACCESSION   XR_011757374
VERSION     XR_011757374.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..617
                     /gene="LOC139840353"
                     /note="uncharacterized LOC139840353; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840353"
     ncRNA           1..617
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840353"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840353"
ORIGIN      
        1 tttgtttatt taaattagat ttgtcttcga tttataatct gttagaaaat gatgatttgc
       61 caaaacagcg tttatgtggc taatgattgt tattatgaat gagaagtagt caaagatgcg
      121 actttttgtg ttggttgtta ttatgaatga ttgttattat gatgatttgc aatctctata
      181 ctatactttt tggtgcgttc acaggctttt acaggcttga aatgaacctg gagtgcttga
      241 tgatttcaag aaacattatc ctcttaatga gatatatact cagatcacat atattcatgc
      301 tattaaagaa tcttttcttc caaaagtctt tatgagattg caaaaagttt acaatcgtgt
      361 tgctgcttca attatggata ccaaagaaac cgaagaatat gatgtaagag ccgatgattc
      421 tgtgaatgtg tcacgaggaa aatacttatg tttatatcaa gggggttcgt ttgatatgca
      481 tttgcttata tattatgtat ttttgttata gtagcgaatg tgttgtagca tggtagtagc
      541 tataagatta ccatgcattg gttgtttatt gtatctcgaa aattataaaa gttgtggcat
      601 gacttttgtt cgtgttt
//
LOCUS       XR_011757375             540 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840353), transcript variant X2, ncRNA.
ACCESSION   XR_011757375
VERSION     XR_011757375.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..540
                     /gene="LOC139840353"
                     /note="uncharacterized LOC139840353; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840353"
     ncRNA           1..540
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840353"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139840353"
ORIGIN      
        1 tttgtttatt taaattagat ttgtcttcga tttataatct gttagaaaat gatgatttgc
       61 caaaacagcg tttatgtggc taatgattgt tattatgaat gagaagtagt caaagatgcg
      121 actttttgtg ttggttgtta ttatgaatga ttgttattat gatgatttgc aatctctata
      181 ctatactttt tggtgcgttc acaggctttt acaggcttga aatgaacctg gagtgcttga
      241 tgatttcaag aaacattatc ctcttaatga gatatattcg tgttgctgct tcaattatgg
      301 ataccaaaga aaccgaagaa tatgatgtaa gagccgatga ttctgtgaat gtgtcacgag
      361 gaaaatactt atgtttatat caagggggtt cgtttgatat gcatttgctt atatattatg
      421 tatttttgtt atagtagcga atgtgttgta gcatggtagt agctataaga ttaccatgca
      481 ttggttgttt attgtatctc gaaaattata aaagttgtgg catgactttt gttcgtgttt
//
LOCUS       XR_011757376             927 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840355), transcript variant X1, ncRNA.
ACCESSION   XR_011757376
VERSION     XR_011757376.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..927
                     /gene="LOC139840355"
                     /note="uncharacterized LOC139840355; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840355"
     ncRNA           1..927
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840355"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840355"
ORIGIN      
        1 acagattaga aaacgcagga atttacatca gtttcatcgt ctccctcagt ttaacccatt
       61 attagggttt caaccgccac acacgaatcc gctgcatcat ttttttgcga ttcgaatcga
      121 ctatcgcaca aaccaacgcc gtttcttttc tccatcgatt gtgactggcg atctgatctt
      181 acagtttctt cttttctgca attcgaatct ccttggtgat tctatattac gaaaataggg
      241 tttttatttg accctgtttg ttcggtttct tcaattaggg cttttcgtta ttggtaaccg
      301 gatagggttt ttattttacc ctgactgttt ggtttcttca atcctgctat tgctgtctta
      361 aatatggtga attcgattat ctaactttgt gagccacttc cgaatgggca aatttttcct
      421 aaaggtgaga ttatttgttt accacttggt tgaccaaagg cgattcattg tattgatgtc
      481 tgattcaggg aggaaaaatt agtggagcgt gcaaaaattc ttaaagtaaa tgttggaact
      541 gatgttgata ctgatattgg ccatgttatt aacaaaacag tgcacagttt aattcttttt
      601 aaaaattgtt tgtgtttgta ctctgtaaag gtaaggaatt aaatttataa ttctgatgcg
      661 ttaataggcg aaggaaaagg cttttacagg cttgaaatga acctggagtg cttgatgatt
      721 tcaagaaaca ttatcctctt aatgagatat atgcttttac aggcttgaaa tgaacctgga
      781 gtgcttgatg atttcaagaa acattatcct cttaatgaga tatatactca gatcacatat
      841 attcatgcta ttaaagaatc ttttcttcca aaagtcttta tgagattgca aaaagtttac
      901 aagtacttca attttcctga aactctc
//
LOCUS       XR_011757377             854 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840355), transcript variant X2, ncRNA.
ACCESSION   XR_011757377
VERSION     XR_011757377.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..854
                     /gene="LOC139840355"
                     /note="uncharacterized LOC139840355; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840355"
     ncRNA           1..854
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840355"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840355"
ORIGIN      
        1 acagattaga aaacgcagga atttacatca gtttcatcgt ctccctcagt ttaacccatt
       61 attagggttt caaccgccac acacgaatcc gctgcatcat ttttttgcga ttcgaatcga
      121 ctatcgcaca aaccaacgcc gtttcttttc tccatcgatt gtgactggcg atctgatctt
      181 acagtttctt cttttctgca attcgaatct ccttggtgat tctatattac gaaaataggg
      241 tttttatttg accctgtttg ttcggtttct tcaattaggg cttttcgtta ttggtaaccg
      301 gatagggttt ttattttacc ctgactgttt ggtttcttca atcctgctat tgctgtctta
      361 aatatggtga attcgattat ctaactttgt gagccacttc cgaatgggca aatttttcct
      421 aaaggtgaga ttatttgttt accacttggt tgaccaaagg cgattcattg tattgatgtc
      481 tgattcaggg aggaaaaatt agtggagcgt gcaaaaattc ttaaagtaaa tgttggaact
      541 gatgttgata ctgatattgg ccatgttatt aacaaaacag tgcacagttt aattcttttt
      601 aaaaattgtt tgtgtttgta ctctgtaaag gtaaggaatt aaatttataa ttctgatgcg
      661 ttaataggcg aaggaaaagg cttttacagg cttgaaatga acctggagtg cttgatgatt
      721 tcaagaaaca ttatcctctt aatgagatat atactcagat cacatatatt catgctatta
      781 aagaatcttt tcttccaaaa gtctttatga gattgcaaaa agtttacaag tacttcaatt
      841 ttcctgaaac tctc
//
LOCUS       XR_011757378             881 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840355), transcript variant X3, ncRNA.
ACCESSION   XR_011757378
VERSION     XR_011757378.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..881
                     /gene="LOC139840355"
                     /note="uncharacterized LOC139840355; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840355"
     ncRNA           1..881
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840355"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840355"
ORIGIN      
        1 acagattaga aaacgcagga atttacatca gtttcatcgt ctccctcagt ttaacccatt
       61 attagggttt caaccgccac acacgaatcc gctgcatcat ttttttgcga ttcgaatcga
      121 ctatcgcaca aaccaacgcc gtttcttttc tccatcgatt gtgactggcg atctgatctt
      181 acagtttctt cttttctgca attcgaatct ccttggtgat tctatattac gaaaataggg
      241 tttttatttg accctgtttg ttcggtttct tcaattaggg cttttcgtta ttggtaaccg
      301 gatagggttt ttattttacc ctgactgttt ggtttcttca atcctgctat tgctgtctta
      361 aatatggtga attcgattat ctaactttgt gagccacttc cgaatgggca aatttttcct
      421 aaaggtgaga ttatttgttt accacttggt tgaccaaagg cgattcattg tattgatgtc
      481 tgattcaggg aggaaaaatt agtggagcgt gcaaaaattc ttaaagtaaa tgttggaact
      541 gatgttgata ctgatattgg ccatgttatt aacaaaacag tgcacagttt aattcttttt
      601 aaaaattgtt tgtgtttgta ctctgtaaag gtaaggaatt aaatttataa ttctgatgcg
      661 ttaataggcg aaggaaaagg cttttacagg cttgaaatga acctggagtg cttgatgatt
      721 tcaagaaaca ttatcctctt aatgagatat atgcttttac aggcttgaaa tgaacctgga
      781 gtgcttgatg atttcaagaa acattatcct cttaatgaga tatatggttg aagcgatttt
      841 aataaaggct tcaagttact cttcatttaa tccacttcaa a
//
LOCUS       XR_011757379            1495 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840356), transcript variant X1, ncRNA.
ACCESSION   XR_011757379
VERSION     XR_011757379.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1495
                     /gene="LOC139840356"
                     /note="uncharacterized LOC139840356; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840356"
     ncRNA           1..1495
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840356"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840356"
ORIGIN      
        1 ttaaatcaaa ctatttttct ctctcttcaa accgtcgctc tcctaaacaa agattcaccc
       61 taaattaggg ttaccttcga ttgcatccgc caccgatcaa atctcattca aaaagatcga
      121 taaattaaat cgccgttcat caaccctgag taggcatcga tgttaattgg gataattgga
      181 ggtgttttca ggtaatcgat tttaggtttc tatactactc acgttatcag ataaaagcat
      241 tgtaaatgct aatacatctc atgatttgat tcaacggtct gttaatccac aaaaattgtt
      301 catcagcaaa caattaatta tcactttaac tgataatcga tctacacaat acgtattttg
      361 acttttttgt ttggcgtgga caaaattgct gtaaatctgg agtaatataa acaaccaaat
      421 cgtgatgttg ttttcgatta taaggttcat gtgtatacgg tttatcattg ttatgagcga
      481 ttcatcgact tttttgagtg agatagattt cgacgatgca ggactctttc gttatattga
      541 gatcatcatt ggttactggg gttgtattag ctcatgcacc aattgctttc ttactaaatt
      601 catttctgga gattcatcag aattggttag ttagcattgt agtttgggca gaaagtttct
      661 gaaagacact ctgttgagaa gtggagcatg gaagcaagaa aatcacatct tattaaggga
      721 gggttggtaa acttttaaat agaaggtcga agcaacgaat cagatgatat agtatggcta
      781 cacatttgat aaattatagg tcagacatac agaaggatgt attcgaaatc caggaaagga
      841 aaaggtgatc ctgaataata tgtttcaaaa catcttgaag agaagtggta aaggaaagag
      901 acctggaaag ggtggaaaca aattcatgaa aagtgttgat ctcggattta agactcctag
      961 agaggctgct gaagtggcaa aaatgtgagg aaggctcaac cacaagtaga tcttaaaaca
     1021 ctaatgtgtg tttggtaggt gggacaacaa ggaagtgaca agtagtgatg ggtatatgac
     1081 gcttcaaacc aaaatttgac tttgctttca taaatcaaag aagcaaaaaa acatctggtg
     1141 aaagtgaatg cacatcattc gttgccagtt gccaccatat ctaatgggtt ccaaaacaat
     1201 ggccatcaaa tgcccataaa atgtgagcgc gatacctttt accaatggct atcaaaagct
     1261 tataattgtt actaattttc tgcataaagt tgcaatgaca atcaataaaa atcaaggaca
     1321 atctatatca cacgttggtt tatttcttct aaaaccaatc atggacaact ttaaatggtt
     1381 cgtattactt taaaatctat ttataacttt ttagtatttt gttaatcaat tttaatactt
     1441 tataacatgt acattgttta aaggacgaaa ctggagatgt taatggaccg gatca
//
LOCUS       XR_011757380            1242 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840356), transcript variant X2, ncRNA.
ACCESSION   XR_011757380
VERSION     XR_011757380.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1242
                     /gene="LOC139840356"
                     /note="uncharacterized LOC139840356; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840356"
     ncRNA           1..1242
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840356"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840356"
ORIGIN      
        1 ttaaatcaaa ctatttttct ctctcttcaa accgtcgctc tcctaaacaa agattcaccc
       61 taaattaggg ttaccttcga ttgcatccgc caccgatcaa atctcattca aaaagatcga
      121 taaattaaat cgccgttcat caaccctgag taggcatcga tgttaattgg gataattgga
      181 ggtgttttca ggttcatgtg tatacggttt atcattgtta tgagcgattc atcgactttt
      241 ttgagtgaga tagatttcga cgatgcagga ctctttcgtt atattgagat catcattggt
      301 tactggggtt gtattagctc atgcaccaat tgctttctta ctaaattcat ttctggagat
      361 tcatcagaat tggttagtta gcattgtagt ttgggcagaa agtttctgaa agacactctg
      421 ttgagaagtg gagcatggaa gcaagaaaat cacatcttat taagggaggg ttggtaaact
      481 tttaaataga aggtcgaagc aacgaatcag atgatatagt atggctacac atttgataaa
      541 ttataggtca gacatacaga aggatgtatt cgaaatccag gaaaggaaaa ggtgatcctg
      601 aataatatgt ttcaaaacat cttgaagaga agtggtaaag gaaagagacc tggaaagggt
      661 ggaaacaaat tcatgaaaag tgttgatctc ggatttaaga ctcctagaga ggctgctgaa
      721 gtggcaaaaa tgtgaggaag gctcaaccac aagtagatct taaaacacta atgtgtgttt
      781 ggtaggtggg acaacaagga agtgacaagt agtgatgggt atatgacgct tcaaaccaaa
      841 atttgacttt gctttcataa atcaaagaag caaaaaaaca tctggtgaaa gtgaatgcac
      901 atcattcgtt gccagttgcc accatatcta atgggttcca aaacaatggc catcaaatgc
      961 ccataaaatg tgagcgcgat accttttacc aatggctatc aaaagcttat aattgttact
     1021 aattttctgc ataaagttgc aatgacaatc aataaaaatc aaggacaatc tatatcacac
     1081 gttggtttat ttcttctaaa accaatcatg gacaacttta aatggttcgt attactttaa
     1141 aatctattta taacttttta gtattttgtt aatcaatttt aatactttat aacatgtaca
     1201 ttgtttaaag gacgaaactg gagatgttaa tggaccggat ca
//
LOCUS       XM_071830621            1546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RNA-binding protein 1-like
            (LOC139840357), transcript variant X1, mRNA.
ACCESSION   XM_071830621
VERSION     XM_071830621.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1546
                     /gene="LOC139840357"
                     /note="RNA-binding protein 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840357"
     CDS             133..885
                     /gene="LOC139840357"
                     /codon_start=1
                     /product="RNA-binding protein 1-like"
                     /protein_id="XP_071686722.1"
                     /db_xref="GeneID:139840357"
                     /translation="MADAYWKYAAADNRQQPQQQQQQQQQQQQQQLHPLIAKRPRTDY
                     DIPGGRELPSYLAREEERGPHLVVKDSDTIGASYDRYLRGSQVSQYAGIESARPMSTG
                     FGGHLLEDPRLMSMGLMGLDPALALAAKGRDAGLIGARPEIPLPPDASNTLYVEGLPS
                     NCSRREVAHIFRPFVGYKEARLVAKDSRHVLCFVDFNSPAEAATAKDALQGYKFDEHD
                     RDSAILKMQFSRNPGRRTGGATKSDGGSRRRR"
     misc_feature    574..822
                     /gene="LOC139840357"
                     /note="RNA recognition motif (RRM) found in Arabidopsis
                     thaliana nuclear speckle RNA-binding protein A (AtNSRA)
                     and similar protein; Region: RRM_AtNSRA_like; cd21618"
                     /db_xref="CDD:410197"
ORIGIN      
        1 acaatacaaa gtacgaagta attaaaattc aatttactca atataatcag cacacgaata
       61 gtataaatcg aaaaggtgag ccggtaaatc ttcttcttct tcttgattct cgtaatcagg
      121 gttcaattta taatggccga tgcttactgg aaatatgctg ccgccgataa tagacaacag
      181 ccgcaacagc agcaacagca gcaacaacaa caacaacaac aacaacttca tccacttatt
      241 gcaaaacgcc cgcgtacgga ttacgatatt cccggtggtc gtgaattgcc tagctattta
      301 gctcgtgagg aagagagagg tccccaccta gtcgttaaag attctgatac cattggtgca
      361 tcttacgatc gctatttgcg tggctcgcaa gtttctcaat acgctggcat cgagtctgcc
      421 agacccatga gcacgggatt cggtggtcat cttcttgaag atccacgttt aatgagtatg
      481 ggcctgatgg gtttggaccc cgcattagca ttagccgcaa aaggtcggga tgcaggattg
      541 attggtgcga gacccgagat ccctttgcca cctgatgcta gcaacacact ctatgttgag
      601 ggtttacctt caaattgttc acggagagaa gtggctcata tctttcgtcc ttttgtcggc
      661 tataaagaag cgcggcttgt ggccaaggat tccagacatg tactctgttt tgtcgatttt
      721 aacagtccag cagaggcagc tacagctaaa gatgctttac aaggttataa gttcgacgag
      781 catgaccgtg actcggccat cttaaaaatg caattttctc gcaatcctgg tagaaggaca
      841 ggtggcgcaa caaagtcaga tggagggtct cgtagaagac gttgaatatg ccagctttac
      901 agagttccag tttctttagg acgaaatgaa tcgagtgaat tgcgatttgc gagcgatggt
      961 tgcacgcaca tttgaagctt tgttatatac gattaaattc tgtttcccga ccgagggcta
     1021 tgttttatat tttccataac gatgaatgtt tgtgtatttt aaattagggt attttgcttt
     1081 gaacttgtga ttttacctat taattatgtt ttcatttttt gatgtttaat tagcgttttg
     1141 attatattgt gagtctttac gacatgatag aatcagcaat gcggatcgaa gttacgtaaa
     1201 gcgggtccca cctgggcaac ttctttcttt tttcttcttt ttgggttata ctgatgatta
     1261 aaacgggtcc agtgtgccaa ttctgttatt ataatgaggt ccaatgagtt atttgaaacg
     1321 tccgaaatca ttctctctac ttggtctccg taatccatgt tcggcgttta tatgcatttt
     1381 taatcctatc tgtgatgatt gaattgcgtt caatttaatg tacaagtagt tgacctcttt
     1441 aagatattct acatgtgctg aatttgctga ttcctaaacg ttcgcacact gcatgcccgg
     1501 gctctaattt ggtatctgtt cgcttggctc aagtggcgga agcaca
//
LOCUS       XM_071830623            1559 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RNA-binding protein 1-like
            (LOC139840357), transcript variant X2, mRNA.
ACCESSION   XM_071830623
VERSION     XM_071830623.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1559
                     /gene="LOC139840357"
                     /note="RNA-binding protein 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840357"
     CDS             133..885
                     /gene="LOC139840357"
                     /codon_start=1
                     /product="RNA-binding protein 1-like"
                     /protein_id="XP_071686724.1"
                     /db_xref="GeneID:139840357"
                     /translation="MADAYWKYAAADNRQQPQQQQQQQQQQQQQQLHPLIAKRPRTDY
                     DIPGGRELPSYLAREEERGPHLVVKDSDTIGASYDRYLRGSQVSQYAGIESARPMSTG
                     FGGHLLEDPRLMSMGLMGLDPALALAAKGRDAGLIGARPEIPLPPDASNTLYVEGLPS
                     NCSRREVAHIFRPFVGYKEARLVAKDSRHVLCFVDFNSPAEAATAKDALQGYKFDEHD
                     RDSAILKMQFSRNPGRRTGGATKSDGGSRRRR"
     misc_feature    574..822
                     /gene="LOC139840357"
                     /note="RNA recognition motif (RRM) found in Arabidopsis
                     thaliana nuclear speckle RNA-binding protein A (AtNSRA)
                     and similar protein; Region: RRM_AtNSRA_like; cd21618"
                     /db_xref="CDD:410197"
ORIGIN      
        1 acaatacaaa gtacgaagta attaaaattc aatttactca atataatcag cacacgaata
       61 gtataaatcg aaaaggtgag ccggtaaatc ttcttcttct tcttgattct cgtaatcagg
      121 gttcaattta taatggccga tgcttactgg aaatatgctg ccgccgataa tagacaacag
      181 ccgcaacagc agcaacagca gcaacaacaa caacaacaac aacaacttca tccacttatt
      241 gcaaaacgcc cgcgtacgga ttacgatatt cccggtggtc gtgaattgcc tagctattta
      301 gctcgtgagg aagagagagg tccccaccta gtcgttaaag attctgatac cattggtgca
      361 tcttacgatc gctatttgcg tggctcgcaa gtttctcaat acgctggcat cgagtctgcc
      421 agacccatga gcacgggatt cggtggtcat cttcttgaag atccacgttt aatgagtatg
      481 ggcctgatgg gtttggaccc cgcattagca ttagccgcaa aaggtcggga tgcaggattg
      541 attggtgcga gacccgagat ccctttgcca cctgatgcta gcaacacact ctatgttgag
      601 ggtttacctt caaattgttc acggagagaa gtggctcata tctttcgtcc ttttgtcggc
      661 tataaagaag cgcggcttgt ggccaaggat tccagacatg tactctgttt tgtcgatttt
      721 aacagtccag cagaggcagc tacagctaaa gatgctttac aaggttataa gttcgacgag
      781 catgaccgtg actcggccat cttaaaaatg caattttctc gcaatcctgg tagaaggaca
      841 ggtggcgcaa caaagtcaga tggagggtct cgtagaagac gttgaatatg ccagctttac
      901 aggtgaactt acgagttcca gtttctttag gacgaaatga atcgagtgaa ttgcgatttg
      961 cgagcgatgg ttgcacgcac atttgaagct ttgttatata cgattaaatt ctgtttcccg
     1021 accgagggct atgttttata ttttccataa cgatgaatgt ttgtgtattt taaattaggg
     1081 tattttgctt tgaacttgtg attttaccta ttaattatgt tttcattttt tgatgtttaa
     1141 ttagcgtttt gattatattg tgagtcttta cgacatgata gaatcagcaa tgcggatcga
     1201 agttacgtaa agcgggtccc acctgggcaa cttctttctt ttttcttctt tttgggttat
     1261 actgatgatt aaaacgggtc cagtgtgcca attctgttat tataatgagg tccaatgagt
     1321 tatttgaaac gtccgaaatc attctctcta cttggtctcc gtaatccatg ttcggcgttt
     1381 atatgcattt ttaatcctat ctgtgatgat tgaattgcgt tcaatttaat gtacaagtag
     1441 ttgacctctt taagatattc tacatgtgct gaatttgctg attcctaaac gttcgcacac
     1501 tgcatgcccg ggctctaatt tggtatctgt tcgcttggct caagtggcgg aagcacata
//
LOCUS       XM_071830624            3897 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840358), mRNA.
ACCESSION   XM_071830624
VERSION     XM_071830624.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3897
                     /gene="LOC139840358"
                     /note="uncharacterized LOC139840358; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840358"
     CDS             450..3878
                     /gene="LOC139840358"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686725.1"
                     /db_xref="GeneID:139840358"
                     /translation="MAIEKNSFKVVPSSTRLDSEFSSRSREESISSEDVEFRKRGGVE
                     LDDDEEDDCDSGAGSDDFDLLELGETGEEFCQIGDQTCSIPFELYNLSGLEDILSMDV
                     WNDVLTEDERLGLTKYLPDMDQEHFMRTIKELSTGCNFHFGAPINKLFEMLRGGLCEP
                     RVSLYRQGLGFFHKQRHYHFIRNHHNTMVNNLVQIRDAWLKYRGYSIDEKLRVLNILK
                     SQKSLMYEKIEELETNSSEESAEGVWINNTIKDHKQKQGHVRSYLEPVNFGKPDVKGA
                     LKVSGSKMSTNKEKVSPFSPVELKPGPSGSSSALHKQLRDYYEENPMYDVTVHRDHNW
                     TDKVGKKYKGFRADEFPESFMGLHTLGRNRTVNQLSDIKVLTAKPSNSRYTNDYGKKY
                     KRTENNQIIGGLNPSQIDIQQDMYPLGEPFWHNQLQGDHMNLPYRMGMKKGRADSTQS
                     GQLVAAAEAMRMLSKGEETESDSSEHFYEDEDDNNPLMRSKWAYPSGVSMKSEPSRKK
                     PKVGGKNSNTNVKDLDMTLQSLRNNGDFHVPLRKPYPGGKKKQKGEFGHDYTTLTPTI
                     VNDYVPIKGQMIEGYGQDYQQMVNIKLSGCNSGSKKRKIKNEIMYMDEHDQENHGHGP
                     GQGQGQGQSQQNVGYIRSAGKRKWAEEIPFENVISEAPVIDIIEEEAELESKMQKKPF
                     TPITPTVHTGFSFSVTHLLSAVRMAMVTLLPDDNVNDNKQEAVNGDQGGTTSDPDVNP
                     NVPSLTVKDIVNRVRSNPGDPCILETQEPLQDLVRGVLKIFGSKTAPLGAKGWKALVS
                     YKKSIKSWSWVGPISQISPDQDIVEEVTSPDSWGIPHKMLVKLVDSFANWLKSGQETL
                     QQIGSLPPPPLALMQQNLDEKERFRDLRAQKSLNTINPTSEEVRDYFRKEEVLRYLIP
                     DRAFAYTAVDGKKSTVAPSRKGAGKPTSKARDHFMLKKDRPPHVTILCLVRDAAARLP
                     GGIGTRADVCTLIRDSQYIVEEVSDAQVNQVVSGALDRLHYERDPCVQFDGERKLWVY
                     LHREREEEDFDDDGTSSTKKWKRQKKEVVEPGDQVAVPDQGAVLDQGAVTHGTSEQNG
                     FDLSSDLNVEPSGVNEAPVLDNESIYQKNSADQAFNGTREADQKDVELLNTSIS"
     misc_feature    708..1031
                     /gene="LOC139840358"
                     /note="DEUBAD domain found in nuclear factor related to
                     kappa-B-binding protein (NFRKB) and similar proteins;
                     Region: DEUBAD_NFRKB; cd21865"
                     /db_xref="CDD:439381"
     misc_feature    order(729..731,753..755,765..767,777..779,789..791,
                     801..809,813..815,825..827,837..839,849..851,864..875,
                     882..887,894..896,906..908,945..947,957..959,966..971,
                     978..980,990..992,999..1004,1020..1025)
                     /gene="LOC139840358"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:439381"
ORIGIN      
        1 gtcactcact cactcagtct ctcctcctcc aacaccataa acacaccacc aatatcaccc
       61 accatcttcc cctctttcta tctctgcaat cctatacgct tcttttcact aaccctaatt
      121 tccccctttt ttgttatttt tccataatta cccgctaatc aaacggctca tatctctcca
      181 cgtctccatc gtcactatca cctttcttca tcttcttcac ctatctatct gttacctcac
      241 aaaaattatt ccccatgcga ttccctttct agggtttctt acacatactt aaagttctct
      301 ccaaaaaaac tcgaaattaa agaaaatttt cataattttt tgaatatgat catcatttga
      361 gcttccgtta tttgaattta gcacaaataa gggtttgtga tgaattgaag gaatctgaat
      421 taggtttgct acaattttta aattgttaga tggctattga aaagaatagc tttaaagttg
      481 ttccaagtag tactagatta gattctgaat tttcgtctcg cagtagggaa gaaagtatat
      541 ctagtgaaga tgtcgagttt cgaaaacgag gtggtgttga attggatgat gatgaagaag
      601 atgattgtga ttcgggtgcg ggttcggatg atttcgattt gcttgaattg ggtgaaactg
      661 gtgaggagtt ttgtcaaatt ggggatcaaa cttgtagcat tccgtttgag ttgtataatc
      721 tttcagggtt agaagatatt ttatcaatgg atgtttggaa tgatgtttta acagaagacg
      781 aacgtttagg tcttacgaaa tatctccctg atatggacca agaacatttc atgcgaacga
      841 taaaagagct ttcaacgggt tgcaattttc atttcggggc tccaattaat aagcttttcg
      901 agatgttaag aggaggatta tgtgaaccaa gagtttcact ttatcgacaa gggctcgggt
      961 tttttcataa acaacgacat tatcatttca ttaggaatca tcataacacg atggtcaata
     1021 accttgttca aatacgtgat gcgtggttaa agtatcgggg gtatagcatt gacgaaaagc
     1081 ttcgcgtgtt gaatattttg aaaagtcaaa agagcttaat gtatgagaaa atcgaagaat
     1141 tggaaaccaa ttcttcagaa gaatctgcag agggtgtgtg gatcaacaat acgataaaag
     1201 accataaaca aaagcagggt catgttcggt cttatttaga acctgtaaat tttggaaagc
     1261 cggacgtgaa aggagcatta aaggtttcgg gctcgaaaat gtctaccaac aaagaaaaag
     1321 taagcccgtt ttctccggtt gaactaaaac ctgggccttc gggctcatca tcagctcttc
     1381 acaaacagct gagggattat tatgaagaga acccgatgta tgatgtcact gttcatcgag
     1441 atcataactg gacggataaa gttggcaaaa agtataaagg ttttagggca gacgaattcc
     1501 ccgaatcttt catgggtttg catactttgg gcagaaatag aactgtaaat cagttgtcag
     1561 acataaaagt attaactgca aaaccatcta actcaagata tacgaatgat tacgggaaga
     1621 agtataaacg aactgagaat aatcagataa ttggcggttt aaatccttca caaatagata
     1681 tacaacaaga tatgtatcct ttaggtgaac cgttttggca caaccaacta caaggggacc
     1741 atatgaatct accgtacagg atggggatga agaagggtag agcagattct acacaaagtg
     1801 gacaacttgt ggcagctgca gaagcaatga gaatgctttc aaaaggtgag gaaacggaat
     1861 cagattcatc tgaacatttt tacgaagatg aagacgataa taatcctctg atgagaagta
     1921 aatgggctta ccctagtggt gtaagtatga aatctgagcc aagtcgtaaa aagcccaaag
     1981 ttggcggaaa gaatagcaat acaaatgtta aagatcttga tatgacgttg caaagtttaa
     2041 gaaataacgg tgattttcac gttccgctaa gaaaaccata tcccggtggg aagaagaagc
     2101 aaaaaggtga atttgggcat gattatacga cccttacacc aacgattgta aatgattatg
     2161 ttcccataaa aggtcaaatg attgaaggtt atggtcaaga ttatcaacaa atggtgaata
     2221 taaagttatc agggtgcaat tcagggtcca agaaacgtaa gataaaaaat gagattatgt
     2281 acatggacga acatgatcaa gaaaatcatg gtcatggtcc tggtcaaggt caaggtcaag
     2341 gtcaaagtca acaaaatgtt gggtatatta gaagtgcagg gaagaggaaa tgggctgaag
     2401 agattccgtt tgaaaatgtg atttccgagg caccggttat tgatattatc gaggaagaag
     2461 cagagttaga aagtaaaatg cagaaaaaac cgtttacgcc aattactcct accgttcaca
     2521 cgggattttc gttttcggtc acacacttat tgtcagctgt aagaatggca atggttactt
     2581 tacttccaga cgataatgta aatgataata aacaagaagc tgttaatgga gatcaaggcg
     2641 ggaccacttc tgatcctgat gtgaacccga atgttccttc tttaaccgtt aaggatatag
     2701 tcaaccgtgt gaggtcaaac ccaggtgacc catgtattct tgaaacccaa gaaccacttc
     2761 aagatttggt gcgaggggtt ctgaagatat ttgggtcaaa aacggcacct ttgggtgcaa
     2821 aaggatggaa agcgctcgtg tcatataaaa agtcaattaa aagctggtca tgggtggggc
     2881 ccatttctca aatttcaccc gatcaagaca ttgttgaaga ggtaacgtct cctgattcgt
     2941 ggggtatacc tcacaaaatg ctcgttaaat tggtcgactc gtttgctaat tggcttaaaa
     3001 gcggtcaaga aacgttgcag caaattggga gtcttccacc tccaccgctg gctttgatgc
     3061 aacaaaattt ggacgaaaaa gaacgttttc gagacttacg agctcaaaaa agtctcaaca
     3121 cgataaaccc gacatccgaa gaagttcgag attattttcg caaagaagaa gttctaaggt
     3181 atttaatacc cgaccgggct tttgcatata cggccgttga cgggaaaaag tcaactgtag
     3241 ctccatcacg taagggtgcg ggaaaaccga cttcaaaagc ccgagaccac tttatgctga
     3301 aaaaggatcg gcccccgcac gttaccatac tttgcctggt tcgagacgca gctgcacggt
     3361 taccgggagg tatcgggacc cgggccgatg tttgtacttt aattcgggac tcacaatata
     3421 tcgtagaaga agtttctgat gctcaagtga atcaagtggt aagcggtgca ttggaccgtt
     3481 tgcattatga aagggacccg tgtgtgcaat tcgacgggga aagaaagttg tgggtttatt
     3541 tgcatagaga aagagaagaa gaagatttcg acgatgacgg gacttcgtcg accaaaaaat
     3601 ggaaacggca gaagaaagaa gtagttgagc cgggtgatca ggttgcggta ccagatcagg
     3661 gtgcagtctt ggatcagggt gcagtcacgc atggaaccag tgagcaaaat gggtttgatt
     3721 tgagttctga cttgaatgtt gagccgtctg gcgttaatga agctcctgta ttagataacg
     3781 agtcaatata tcaaaagaat tcggccgatc aagcttttaa tggcacccga gaggctgatc
     3841 agaaagacgt tgagcttttg aacactagca tatcttgatg tttttttttt aaggtaa
//
LOCUS       XM_071830625            3292 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kinesin-like protein KIN-5D
            (LOC139840359), mRNA.
ACCESSION   XM_071830625
VERSION     XM_071830625.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3292
                     /gene="LOC139840359"
                     /note="kinesin-like protein KIN-5D; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139840359"
     CDS             1..3123
                     /gene="LOC139840359"
                     /codon_start=1
                     /product="kinesin-like protein KIN-5D"
                     /protein_id="XP_071686726.1"
                     /db_xref="GeneID:139840359"
                     /translation="MERRGGNTIPSSPSHTPRSMDKAVRDLRHTEGNISGKHDKEKGV
                     NVQVVVRCRPMNSDEEKLHTPVVITCSENKREVCAVQTVANKQIDRSFVFDKVFGPKS
                     QQIDLYHSAVSPIVFEVLEGYNCTIFAYGQTGTGKTYTMEGGGRKKNGEFPSDAGVIP
                     RAVKQIFDILEAQSAEYSMKVTFLELYNEEITDLLAPEEVSKFPEDKSKKPIALMEDG
                     KGGVLVRGLEEEMVSTADEIYRILEKGSAKRRTAETLMNKQSSRSHSIFSITIHIKER
                     TPEGEEIIRCGKLNLVDLAGSENISRSGAKEGRAREAGEINKSLLTLGRVINTLVERS
                     GHIPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHSMEETLSTLDYAHRAKNIKNKPE
                     INQKLMKSAMMKDLYSEIERLKQEVYAAREKNGIYVPKERYLQEEEEKKAMAEKIERM
                     ELDNESRGKQMMELQELYNSQLLTTANLTEKLEKTEIKLQETEHSLFDLEEKHRQANA
                     TIKEKEFLISNLLKSEKALLERAFDLRGELENAASDVSNLFTKIERKDKIEDGNRILV
                     QQFQSQLTKQLDTLHKTIAASVTQQEQQLKGMEEDMQSFVSTKSQATEELRAALEKLK
                     SMYGSGIKTLDDIAEELDGNSQSTFGHVNSQVSKNSSALGELFKGIASEAENLLNDLE
                     NILYNQENKLSTFAQQQREAHSRAVETSRSISNTTMNFFDTLDMHATKLTKIFEEGQI
                     VNDQKLTELERKFEECTANEEKQLLEKVAELLAVSNARKKELVKTAVDGLRETAASKA
                     NRFEVEMSTMKDSSSCIKDEWTNYTKKAEINYLEDTAAVESGKDDLDEVLQKCLQKTK
                     MGSQQWHTAQESLLSLEKSNFASVDEIVRGGLEANKTLRTQYSVAVSSVLDDTNVASK
                     SLLSSIDHSLQLDHDARENLDSIIVPCCGELRELKGGHYHKIIEITANAGQTLLNDYT
                     VDEPSCSTPKKRSFNLPSITSIEVLQTPSFEELLKYFWDSKASSKLPNGDVKQPQSPR
                     DSRLPLAAIN"
     misc_feature    127..1188
                     /gene="LOC139840359"
                     /note="Kinesin motor domain, BimC/Eg5 spindle pole
                     proteins; Region: KISc_BimC_Eg5; cd01364"
                     /db_xref="CDD:276815"
     misc_feature    order(157..159,391..393,400..402,406..417,877..879)
                     /gene="LOC139840359"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:276815"
     misc_feature    order(1018..1020,1027..1029,1036..1038)
                     /gene="LOC139840359"
                     /note="microtubule interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276815"
     misc_feature    <1027..2349
                     /gene="LOC139840359"
                     /note="Chromosome segregation protein NDC80, interacts
                     with SMC proteins [Cell cycle control, cell division,
                     chromosome partitioning]; Region: HEC1; COG5185"
                     /db_xref="CDD:444066"
ORIGIN      
        1 atggaacgaa gaggcggaaa cacgattccg agttcaccgt ctcatacgcc gaggtctatg
       61 gacaaagcag taagagatct taggcataca gaaggaaata ttagtggtaa acatgataaa
      121 gaaaaaggtg ttaatgtgca agttgttgtc agatgcagac caatgaatag tgatgaggag
      181 aaactgcata caccagtggt aattacatgt tcagaaaata agagggaagt atgtgcagtt
      241 caaactgtag ctaacaaaca gattgacaga tcatttgtgt ttgataaggt atttggtcca
      301 aagtctcaac aaatagactt gtaccattca gcggtttcac ctatcgtttt tgaagttctt
      361 gagggataca actgcaccat atttgcttac gggcagacag gtacggggaa aacatacaca
      421 atggaaggtg gagggaggaa aaagaatgga gaattcccga gtgatgcagg ggttattccc
      481 agggctgtta agcagatatt tgatatatta gaagctcaaa gcgcggagta tagtatgaaa
      541 gttacgtttt tagaactgta caacgaggag ataacggatc ttttggcccc ggaagaagtt
      601 tcaaagtttc cggaagacaa gtcaaagaaa ccgatagcac ttatggaaga tggaaagggt
      661 ggtgtacttg taagaggttt ggaagaagag atggtttcaa ctgctgatga aatatacaga
      721 atactggaga aaggttctgc taaaaggcgt acagctgaaa cacttatgaa taaacaaagt
      781 agtcgttctc attcaatatt ttcgatcacg atacacatta aggaacgtac cccggaaggt
      841 gaagagataa ttagatgcgg aaagctcaat ctggttgatc ttgctggttc agagaatatt
      901 tcaagatccg gtgcgaaaga gggaagagca agggaagctg gtgagataaa caaaagtttg
      961 cttacacttg gccgagtcat aaatacacta gttgaacgtt cgggacatat accatatagg
     1021 gatagtaaat taacaagatt attgagagat tcattgggag gtaaaacaaa gacatgcata
     1081 attgctacaa tctccccatc tattcattca atggaagaga cacttagcac attagactac
     1141 gcccaccgtg caaaaaatat caagaacaag cctgagatta atcagaaatt gatgaaatct
     1201 gcaatgatga aggacctgta ttctgaaatc gaacggctta agcaagaagt atatgctgcc
     1261 agagagaaaa atgggatcta tgtaccaaaa gaaagatatc ttcaagaaga ggaggagaag
     1321 aaggcaatgg ctgaaaaaat cgagcggatg gaacttgata acgaatccag gggaaagcaa
     1381 atgatggagc ttcaagaact ttataactct cagctcttaa caactgcgaa tttaactgag
     1441 aagcttgaga aaacagagat aaagctacaa gaaactgaac attcattgtt tgatcttgaa
     1501 gaaaagcaca gacaagcaaa tgcaacaatt aaagagaaag aatttcttat ttccaacctt
     1561 ctcaaatctg aaaaagcact tcttgaacgg gcatttgacc ttcgcggaga gcttgagaat
     1621 gctgcatcag acgtatcaaa tctgttcacc aagattgagc gcaaggacaa aattgaagat
     1681 ggaaacagaa ttcttgtgca gcaatttcaa tctcaattaa ctaaacagct tgacacttta
     1741 cataaaacta tagcagcttc tgtaacacaa caagaacaac agctgaaagg catggaagaa
     1801 gatatgcaat catttgtatc taccaagtcg caggcaactg aagaacttcg tgctgctttg
     1861 gagaagttga aatcgatgta cggttctggt attaaaactt tggatgatat agccgaggag
     1921 cttgatggaa actcacagtc tacattcgga cacgtgaatt cgcaagtctc caaaaattct
     1981 tctgcacttg gagagctttt caagggtatt gcatcagaag ctgaaaattt actcaatgac
     2041 cttgaaaata ttctctacaa ccaggaaaat aaactaagca catttgcaca gcaacaacga
     2101 gaggcacatt ctagagctgt ggaaacttca cggtcgatat ctaacactac aatgaacttc
     2161 tttgatacgt tagacatgca tgccacaaag ttgacaaaaa ttttcgaaga gggtcaaata
     2221 gtcaatgacc aaaaactaac ggaacttgaa agaaagtttg aggaatgcac tgcaaatgaa
     2281 gaaaaacaac ttctagagaa agttgctgaa ttgcttgctg tttctaatgc taggaagaaa
     2341 gaactggtta aaacagctgt ggatggtctg cgtgagactg cagctagtaa agctaacaga
     2401 tttgaggtag aaatgtcaac gatgaaggat tcaagctctt gcataaagga tgagtggaca
     2461 aattacacta aaaaggctga aataaattat cttgaagaca ctgctgcagt tgaatctgga
     2521 aaagatgacc tggatgaagt tcttcagaaa tgtttacaaa agacgaagat gggttcacaa
     2581 caatggcata ctgctcagga atcgttgctc agtttagaga aaagcaactt tgcatctgtg
     2641 gatgaaatag tcaggggagg actggaagct aataaaacgt tgcgcacaca gtattcagtt
     2701 gctgtgtctt ctgtacttga cgatacaaat gttgcaagca aaagccttct ttcctcaatt
     2761 gaccactcat tacaactgga ccatgatgca cgcgagaatc tcgactcgat cattgttcct
     2821 tgctgtggag aactaagaga actaaagggc ggacactacc ataagataat agagatcact
     2881 gcaaacgctg gacaaacgct cttaaatgac tacacggttg atgaaccgtc atgttcaaca
     2941 ccaaaaaaga ggtcatttaa tttaccaagc atcacatcga ttgaagtgct acaaactccg
     3001 tcattcgaag agttacttaa atatttctgg gattcaaaag cttcatcgaa gctaccaaat
     3061 ggagacgtga aacagcctca gtcaccaaga gattctcgac tgccacttgc tgcgattaat
     3121 tgagaaacaa ttagaaactt gtatagacag gctcacattt ggtttccaga ttcaaatttc
     3181 actttgaatt tggagtattt ttttgttaaa tctttatgat gtcgttataa gaagagtgca
     3241 taattgattg attgtgttgg tgtaatcatg ttgcttattt agggccccaa ag
//
LOCUS       XM_071830626            1005 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides succinate dehydrogenase
            subunit 5, mitochondrial-like (LOC139840360), mRNA.
ACCESSION   XM_071830626
VERSION     XM_071830626.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1005
                     /gene="LOC139840360"
                     /note="succinate dehydrogenase subunit 5,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139840360"
     CDS             87..788
                     /gene="LOC139840360"
                     /codon_start=1
                     /product="succinate dehydrogenase subunit 5,
                     mitochondrial-like"
                     /protein_id="XP_071686727.1"
                     /db_xref="GeneID:139840360"
                     /translation="MEKLVMMRSLYRSISRRSFSSISTAAAVSTAAHQSLRRGIHCSA
                     SSLISNNRSPFAMRIGSARCFSDGLTHLPDIKDGDIKNAFKELMAVNWAELPDTVVNK
                     TKRALSRNTEDKASQEALANLLRAAEAVEEFSGFLVTLKMEIDDSVGMSGEDVKPLSD
                     DVANALNVAFGRYYAYLESFGPDEGYLKKKVENELGMKLIHLKMRCSGLGGDWGKVTV
                     LGTSGISGSYIEHRA"
     misc_feature    87..785
                     /gene="LOC139840360"
                     /note="Succinate dehydrogenase subunit 5, mitochondrial;
                     Region: SDH5_plant; cl19720"
                     /db_xref="CDD:388610"
     polyA_site      1005
                     /gene="LOC139840360"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacaattttg catcatcatc atcatcattc ttcatcataa ggagcaaaaa gggctaaaaa
       61 attcacgcat tcaaacagct agctatatgg aaaaattagt gatgatgaga tctctctacc
      121 gttcgatctc aaggagatcg tttagttcca tctctaccgc tgctgctgta agcaccgccg
      181 ctcaccaatc cctccgccgt ggaatccact gctccgcgtc gtctttgata tccaacaatc
      241 gttctccttt tgcaatgaga attggaagtg cccgttgttt cagtgatggc ttgacacact
      301 tgccagacat aaaagatggc gatattaaga atgcttttaa ggaacttatg gctgttaact
      361 gggctgaact tccggacact gttgttaaca aaaccaagcg ggcgttgtct agaaacactg
      421 aagacaaggc tagtcaagag gcattagcga acttattacg tgctgcagag gcagttgaag
      481 agttcagcgg gttccttgta actttgaaaa tggaaattga tgacagtgtt gggatgagtg
      541 gcgaggatgt aaagccttta tctgatgatg ttgctaatgc attaaatgta gcgtttggac
      601 gctactacgc gtacttggaa tcttttggac cagatgaggg ttatttgaag aaaaaagttg
      661 agaatgagtt gggaatgaag ctgatacacc tgaaaatgag atgcagtggt ctcggtggtg
      721 attggggaaa ggtgactgtt cttggaacgt ctggaatttc tggttcatat attgagcaca
      781 gagcttaaat atcatcatgt gagatcatga cctcttatct tgtttgttgt tttcagaaac
      841 attgttgata taggttgctt cttattgttc cgatcaatgt ttccgtttgt tttcaccaac
      901 gttagtttgg ttggattttg ttttctgcac gtcaacttga ataatagcag aaaaaccaac
      961 taaacttgga gtatattcat ttcaggttga agaaatttgt atgca
//
LOCUS       XM_071830627            2205 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450 81Q32-like
            (LOC139840361), mRNA.
ACCESSION   XM_071830627
VERSION     XM_071830627.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2205
                     /gene="LOC139840361"
                     /note="cytochrome P450 81Q32-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840361"
     CDS             68..1666
                     /gene="LOC139840361"
                     /codon_start=1
                     /product="cytochrome P450 81Q32-like"
                     /protein_id="XP_071686728.1"
                     /db_xref="GeneID:139840361"
                     /translation="MINFVIYSYILHCVTVFCKNTSSHTYAMDGTQIFLLFVLFLNSL
                     IIFLKLFVHKKKIHVAPSPPSIPIIGHLHLLNGSIHRVLQHLSSEYGPIMALKFGSRP
                     VVVVTSPSLAEECFKQNDIVLANRPRLLSGKYFDYEYTSIGAVSYGRLWRDLRHVLTV
                     ELLSTTRLKSYMSIREHEVRSLIKSLYQDTSQDFTKVEMRSRTHGLSFNVLTTMIFNK
                     RYFGTDVKNIKEANKFKSLIKDVCEISKATNPGDFITVLRWIDFQGYKKKVLKLQHEY
                     DCFSQNLIDEIRNERTSCSSTKKGKDKTFIDTLLSMQESNQKCYTDNMIKGNIMRLLQ
                     AGTDTSSMTIEWAMSLLLNHPNVLKKARTELDKNIGQERLVQESDLPNLSYIQCIINE
                     TLRLFPTAPLLVPHEASEDCTIGGFDVAGGTMVLVNVWAIHRDPKLWDDPLSFRPERF
                     EKMGKEEYRFIPYGMGRRQCLGSGLANRVMGLVLASLIQCFDWERVDKEFVDLSEGLT
                     MSKEVPLVAKCKVRQAMSHVLMDL"
     misc_feature    338..1612
                     /gene="LOC139840361"
                     /note="cytochrome P450 family 81; Region: CYP81; cd20653"
                     /db_xref="CDD:410746"
     misc_feature    order(443..445,518..520,530..532,554..556,698..700,
                     1061..1063,1070..1075,1082..1087,1262..1264,1274..1279,
                     1283..1285,1451..1462,1469..1483,1490..1495)
                     /gene="LOC139840361"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410746"
     misc_feature    order(788..790,800..802,872..874,1058..1060,1067..1072,
                     1277..1279)
                     /gene="LOC139840361"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410746"
ORIGIN      
        1 tgttttttat acctactcta atgtattaaa ctttgctttt acatctaaaa atttacacat
       61 tcaatgaatg ataaactttg ttatttacag ttatattcta cattgtgtga ctgtattttg
      121 taagaacaca tcatctcaca catacgccat ggatggaact caaatctttc tactttttgt
      181 tttatttctg aattctctca ttatttttct caaattgttt gtacacaaaa aaaagattca
      241 tgtagcacca agtcctcctt ctatcccaat aattggccat cttcatttac tgaatggatc
      301 aattcataga gtcttgcaac acctttcgtc cgaatacggt cctatcatgg cccttaagtt
      361 cggatcacgg ccagttgttg tcgtgacatc accatcgcta gccgaagaat gctttaagca
      421 aaacgacatc gttttagcca atagaccacg tcttttaagt ggcaagtatt tcgactacga
      481 gtacacctca attggtgctg tatcctatgg tcgactttgg agagaccttc gtcatgtttt
      541 gaccgttgaa ttgttatcta caactcgact taaatcttac atgagtattc gagaacatga
      601 agttagatcg ttgatcaaga gtctttatca agatacttct caagatttta cgaaggtaga
      661 aatgagatca agaactcatg gattgtcgtt taatgtactc accacaatga ttttcaataa
      721 acggtatttt gggacagatg tgaagaacat taaagaagcg aataaattta agagtttaat
      781 aaaagacgtg tgtgaaatca gcaaggcaac aaatcccgga gactttatta cagttttacg
      841 atggatcgat tttcaaggtt ataagaagaa ggtgttgaaa ttgcaacatg aatacgattg
      901 cttttctcaa aatttgatcg atgaaattag aaatgaacgg actagctgtt cttcgacgaa
      961 aaaggggaag gataagacgt ttatcgacac tttgctttct atgcaggaat cgaaccagaa
     1021 atgctacact gataatatga ttaaaggtaa cataatgaga ttgctacaag ctggaaccga
     1081 cacgtcatca atgactatag agtgggctat gtcgcttctt ttaaatcatc caaacgtgtt
     1141 aaagaaagct agaacagaac tcgacaaaaa tattggacaa gaacgtttgg tgcaagagag
     1201 cgatcttccc aatctatcat acatccaatg catcatcaac gaaacattga gactatttcc
     1261 aacagcaccg ttgttggtcc cacacgaggc atcagaagac tgcaccattg gagggtttga
     1321 tgtagccggt ggaactatgg tattggtgaa cgtatgggca atacataggg acccaaagct
     1381 atgggatgac cctttaagct ttaggcccga gaggtttgag aaaatgggga aagaggagta
     1441 taggtttata ccatatggaa tgggccgtcg gcagtgtctt gggtcgggcc tggctaaccg
     1501 ggttatgggg ttggtgttgg cgtcgttgat ccaatgcttt gattgggaaa gggttgataa
     1561 agagtttgta gatttgtccg aaggtctaac catgtctaaa gaggtgccgt tggtggctaa
     1621 gtgcaaagta cgccaagcta tgagtcatgt tcttatggac ctatgagtaa tggtgaacta
     1681 gtagtactta ttggttaatt agtgtgccat tggtttcatt tattatatgc ctacctcaat
     1741 aaagtagtac ttaattgaag attaatagag gatggtaata aacattataa agttaagggt
     1801 tgaaatgata agaatagttt ataacttatc tgtgggctcg aaagagggga gcccaagagt
     1861 aataagtcgt tttatgggcc atgagctttc tcatggagaa aagttaggtt tgtctatggg
     1921 tcatactcgg accgaaataa tacggggctt atccaaacag agtccggacc cgaatatgta
     1981 gggaaaaagg aatttgggac cagacttaac gtacacggtt ctagttttgg tccgatttta
     2041 gtttcggtta aagcgtaaaa acccgatccc cttgaggtgg gcgtacataa gagttgggta
     2101 gtttttgtag tagtaagtgg agttatgctt tgtaatgagc ttagttatgt ggtacggatt
     2161 ttattgtgtt ggttgtttat gtaaatccag aatatattat aaaga
//
LOCUS       XR_011757381            2716 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840362), transcript variant X1, ncRNA.
ACCESSION   XR_011757381
VERSION     XR_011757381.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2716
                     /gene="LOC139840362"
                     /note="uncharacterized LOC139840362; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840362"
     ncRNA           1..2716
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840362"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840362"
ORIGIN      
        1 caccctttct tgtaggtttt gcttcccatc ctattatttt ttggccaata tcccttccaa
       61 atctcatttt tgaacaccca catcccattc tttaaaatcg atgcaacagg atctgaagaa
      121 ctcgatttct tccacgcgat tcttcacaaa cgattcaatc tatacagcag atctaaccct
      181 aatcaaattt gcgtccctat tttgttgcga ttaagataag aaaagacata aatcgggatt
      241 ggatcagagc ttggaaagaa agtgtattca gctgtaagtc aattcaccaa acaagtgtat
      301 tcattatctt tttatatcga taaacaaagt tcagaatatc attgtacagt cactgactaa
      361 aagttcaact aaacttcgaa ggtaagttaa gaattcttta tcgtgcttca aagtttaatt
      421 taattcttca atagcaacat gttaagtttg gtgcttctgc aatttatgtt gctgttttgt
      481 gcttcaaagt ttaatttatt actaattttg atttgatgtt ggcctatttt acaatagcaa
      541 catgttaagt tagtgcttta aatgtttgat caatgctaaa tgtgctaatt ttgttgccca
      601 taaccaggga aggttagcac ttatggtgac tactgtgttg ggacaatcaa ggccatgaca
      661 aactaaaagg tcaatgataa tgtggaaata acaacctgat atgtacacgt tttataaaat
      721 tgtaaaataa caatgttaca ttctattatg ttaacttaaa cttagctaat taaaagacta
      781 ttattttaaa cttgatatcc taaaaattgt tatgagtttg ttgactcaaa tatatctaag
      841 cagcatctat cagcatatgg agcttgagag aacgacatat aggcatagta agaggccaac
      901 atctactaac gttggtgtca actaacttgc aggtaacagg cagcacgata catatattga
      961 tcttttgtgc ttcccaaatt gacttaatgc tacgttctat aagcagcctc cggttacttt
     1021 ctaacttcca aggtaacatg gtactattag gttagtttgt agaaaaactt ttacaccaat
     1081 gagaggcggg tttgtatgtg atgagtgtca ctgaatacac atactaaaag gtattagtaa
     1141 cttttaatag taacattata agttttgtgc ttcaaatatt tgattaatgc taactgcggt
     1201 aacctattta ttatgttcat aaaaagggaa gatggaagaa tggcaataat ggctatttcc
     1261 acgttggaac atggttgctt tgacaaacta aaaggtcaaa attgagttga tcaaaggttc
     1321 agtagagtgc atgaggttgg atgacaatga taatcccaaa gttaatgaat ttctcagaat
     1381 ggttgttagc agtctcaaaa aaatacattt attattcaag tcttgacctg aagaggtttt
     1441 gtgttctaca cgtctaacac aatgacaaat gtttactcca aggaaagtga tcctcgaatg
     1501 tttgcagaat ctgatgcatt gagtttttga ctagacaagt cttgacaaaa ctctgactgg
     1561 gacacgtttt caaccctaag tgtacaaccg tataagtgat taatttgttc gtatatatgc
     1621 accttctcta aagtaagaat tactcgagtt cgtattatca tagttagtag ctggatatta
     1681 aattttagta atatagtact ctgtattaaa ttttaagtat cagggtgatt agctgttatt
     1741 tattttagaa aattttaact tcataaatag ttgcacaagc tatatgcttt tgttaactta
     1801 tcaggtgcgt aatcctatct ttaaaaaaga caaagcaatc aatgatttta tatagtatat
     1861 gttttcacgt ggttatcgtt ttgtaataag ttatgaacat gttaattgtt gtcaatttat
     1921 gttctatcga ccaacttaaa tattctattg accaatttat attcattgag ctttgcttta
     1981 agttatcatc acgaattttg aatttcggct ctatatccca atttttgggc tttgtgtgtg
     2041 gtaagaaagc aataggttgc agctgcatag gtggaagaaa caagtgatgt tttcatgatt
     2101 gtgttacctg gctttaacga tgctacaaat caggatttat cttactaatt aaactgcaag
     2161 ttcttgcaac tatataaaaa ttgtgtttgt tggtttagtt tgttaacttt ttattattca
     2221 gaagttgtgg tccagaaaga gaactgaata gtgcgaatct gggtgagctg cagttcacta
     2281 tttcttgtgg ataatttggg ttattagtat atcaaggatg tttatataaa gcacaaatgt
     2341 gagatgtgaa gtattacaca gttatggttg atcaagatgg attatggtga actggatcag
     2401 agtgattcga gctacataat atgggactgg tacttttatt ttccaacaaa agttgctact
     2461 gaagtttttg tgttgaatga tgttgaaaaa ttgacttttg aaagtcaaca gtcaagagat
     2521 taaggactat gtgtattgat ttgggcttgg aggtatggga tcaggatgtt gttatttcaa
     2581 aaaggtgttc gagtaataaa ggtttagatg gtggcacaaa tcatcacact tagagagaga
     2641 ctctgatctc aatttgtttt accttgtaat tcagagaata caagattatg aaaattaact
     2701 tgaaattatt tctata
//
LOCUS       XR_011757382            3053 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840362), transcript variant X2, ncRNA.
ACCESSION   XR_011757382
VERSION     XR_011757382.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3053
                     /gene="LOC139840362"
                     /note="uncharacterized LOC139840362; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840362"
     ncRNA           1..3053
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840362"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840362"
ORIGIN      
        1 caccctttct tgtaggtttt gcttcccatc ctattatttt ttggccaata tcccttccaa
       61 atctcatttt tgaacaccca catcccattc tttaaaatcg atgcaacagg atctgaagaa
      121 ctcgatttct tccacgcgat tcttcacaaa cgattcaatc tatacagcag atctaaccct
      181 aatcaaattt gcgtccctat tttgttgcga ttaagataag aaaagacata aatcgggatt
      241 ggatcagagc ttggaaagaa agtgtattca gctgtaagtc aattcaccaa acaagtgtat
      301 tcattatctt tttatatcga taaacaaagt tcagaatatc attgtacagt cactgactaa
      361 aagttcaact aaacttcgaa ggtaagttaa gaattcttta tcgtgcttca aagtttaatt
      421 taattcttca atagcaacat gttaagtttg gtgcttctgc aatttatgtt gctgttttgt
      481 gcttcaaagt ttaatttatt actaattttg atttgatgtt ggcctatttt acaatagcaa
      541 catgttaagt tagtgcttta aatgtttgat caatgctaaa tgtgctaatt ttgttgccca
      601 taaccaggga aggttagcac ttatggtgac tactgtgttg ggacaatcaa ggccatgaca
      661 aactaaaagg tcaatgataa tgtggaaata acaacctgat atgtacacgt tttataaaat
      721 tgtaaaataa caatgttaca ttctattatg ttaacttaaa cttagctaat taaaagacta
      781 ttattttaaa cttgatatcc taaaaattgt tatgagtttg ttgactcaaa tatatctaag
      841 cagcatctat cagcatatgg agcttgagag aacgacatat aggcatagta agaggccaac
      901 atctactaac gttggtgtca actaacttgc aggtaacagg cagcacgata catatattga
      961 tcttttgtgc ttcccaaatt gacttaatgc tacgttctat aagcagcctc cggttacttt
     1021 ctaacttcca aggtaacatg gtactattag gttagtttgt agaaaaactt ttacaccaat
     1081 gagaggcggg tttgtatgtg atgagtgtca ctgaatacac atactaaaag gtattagtaa
     1141 cttttaatag taacattata agttttgtgc ttcaaatatt tgattaatgc taactgcggt
     1201 aacctattta ttatgttcat aaaaagggaa gatggaagaa tggcaataat ggctatttcc
     1261 acgttggaac atggttgctt tgacaaacta aaaggtcaaa attgagttga tcaaaggttc
     1321 agtagagtgc atgaggttgg atgacaatga taatcccaaa gttaatgaat ttctcagaat
     1381 ggttgttagc agtctcaaaa aaatacattt attattcaag tcttgacctg aagaggtaaa
     1441 taggatgatt ataaaagaat gacatatttc ataaaaaaga aaaaggaagg ttccaaaaaa
     1501 gcttgatgtt ggtataattt ttccagttta tgtgcttctt tgttttgttg aatttatgat
     1561 atctttttca tatgattcat atataagcgg actttttatt ctaaataaat aaaaatgtaa
     1621 gtgccataat actctacaag tattaaacct ttttaattgt cgggtatgaa atcaaatttc
     1681 cacctaataa agcttagatc atatcatttt aaaacttatt attatattta ggcacgataa
     1741 ttacaaactc cagtaatgtg atttctttgt aggttttgtg ttctacacgt ctaacacaat
     1801 gacaaatgtt tactccaagg aaagtgatcc tcgaatgttt gcagaatctg atgcattgag
     1861 tttttgacta gacaagtctt gacaaaactc tgactgggac acgttttcaa ccctaagtgt
     1921 acaaccgtat aagtgattaa tttgttcgta tatatgcacc ttctctaaag taagaattac
     1981 tcgagttcgt attatcatag ttagtagctg gatattaaat tttagtaata tagtactctg
     2041 tattaaattt taagtatcag ggtgattagc tgttatttat tttagaaaat tttaacttca
     2101 taaatagttg cacaagctat atgcttttgt taacttatca ggtgcgtaat cctatcttta
     2161 aaaaagacaa agcaatcaat gattttatat agtatatgtt ttcacgtggt tatcgttttg
     2221 taataagtta tgaacatgtt aattgttgtc aatttatgtt ctatcgacca acttaaatat
     2281 tctattgacc aatttatatt cattgagctt tgctttaagt tatcatcacg aattttgaat
     2341 ttcggctcta tatcccaatt tttgggcttt gtgtgtggta agaaagcaat aggttgcagc
     2401 tgcataggtg gaagaaacaa gtgatgtttt catgattgtg ttacctggct ttaacgatgc
     2461 tacaaatcag gatttatctt actaattaaa ctgcaagttc ttgcaactat ataaaaattg
     2521 tgtttgttgg tttagtttgt taacttttta ttattcagaa gttgtggtcc agaaagagaa
     2581 ctgaatagtg cgaatctggg tgagctgcag ttcactattt cttgtggata atttgggtta
     2641 ttagtatatc aaggatgttt atataaagca caaatgtgag atgtgaagta ttacacagtt
     2701 atggttgatc aagatggatt atggtgaact ggatcagagt gattcgagct acataatatg
     2761 ggactggtac ttttattttc caacaaaagt tgctactgaa gtttttgtgt tgaatgatgt
     2821 tgaaaaattg acttttgaaa gtcaacagtc aagagattaa ggactatgtg tattgatttg
     2881 ggcttggagg tatgggatca ggatgttgtt atttcaaaaa ggtgttcgag taataaaggt
     2941 ttagatggtg gcacaaatca tcacacttag agagagactc tgatctcaat ttgttttacc
     3001 ttgtaattca gagaatacaa gattatgaaa attaacttga aattatttct ata
//
LOCUS       XR_011757383            2382 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840362), transcript variant X3, ncRNA.
ACCESSION   XR_011757383
VERSION     XR_011757383.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2382
                     /gene="LOC139840362"
                     /note="uncharacterized LOC139840362; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840362"
     ncRNA           1..2382
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840362"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840362"
ORIGIN      
        1 caccctttct tgtaggtttt gcttcccatc ctattatttt ttggccaata tcccttccaa
       61 atctcatttt tgaacaccca catcccattc tttaaaatcg atgcaacagg atctgaagaa
      121 ctcgatttct tccacgcgat tcttcacaaa cgattcaatc tatacagcag atctaaccct
      181 aatcaaattt gcgtccctat tttgttgcga ttaagataag aaaagacata aatcgggatt
      241 ggatcagagc ttggaaagaa agtgtattca gctggaaggt tagcacttat ggtgactact
      301 gtgttgggac aatcaaggcc atgacaaact aaaaggtcaa tgataatgtg gaaataacaa
      361 cctgatatgt acacgtttta taaaattgta aaataacaat gttacattct attatgttaa
      421 cttaaactta gctaattaaa agactattat tttaaacttg atatcctaaa aattgttatg
      481 agtttgttga ctcaaatata tctaagcagc atctatcagc atatggagct tgagagaacg
      541 acatataggc atagtaagag gccaacatct actaacgttg gtgtcaacta acttgcaggt
      601 aacaggcagc acgatacata tattgatctt ttgtgcttcc caaattgact taatgctacg
      661 ttctataagc agcctccggt tactttctaa cttccaaggt aacatggtac tattaggtta
      721 gtttgtagaa aaacttttac accaatgaga ggcgggtttg tatgtgatga gtgtcactga
      781 atacacatac taaaaggtat tagtaacttt taatagtaac attataagtt ttgtgcttca
      841 aatatttgat taatgctaac tgcggtaacc tatttattat gttcataaaa agggaagatg
      901 gaagaatggc aataatggct atttccacgt tggaacatgg ttgctttgac aaactaaaag
      961 gtcaaaattg agttgatcaa aggttcagta gagtgcatga ggttggatga caatgataat
     1021 cccaaagtta atgaatttct cagaatggtt gttagcagtc tcaaaaaaat acatttatta
     1081 ttcaagtctt gacctgaaga ggttttgtgt tctacacgtc taacacaatg acaaatgttt
     1141 actccaagga aagtgatcct cgaatgtttg cagaatctga tgcattgagt ttttgactag
     1201 acaagtcttg acaaaactct gactgggaca cgttttcaac cctaagtgta caaccgtata
     1261 agtgattaat ttgttcgtat atatgcacct tctctaaagt aagaattact cgagttcgta
     1321 ttatcatagt tagtagctgg atattaaatt ttagtaatat agtactctgt attaaatttt
     1381 aagtatcagg gtgattagct gttatttatt ttagaaaatt ttaacttcat aaatagttgc
     1441 acaagctata tgcttttgtt aacttatcag gtgcgtaatc ctatctttaa aaaagacaaa
     1501 gcaatcaatg attttatata gtatatgttt tcacgtggtt atcgttttgt aataagttat
     1561 gaacatgtta attgttgtca atttatgttc tatcgaccaa cttaaatatt ctattgacca
     1621 atttatattc attgagcttt gctttaagtt atcatcacga attttgaatt tcggctctat
     1681 atcccaattt ttgggctttg tgtgtggtaa gaaagcaata ggttgcagct gcataggtgg
     1741 aagaaacaag tgatgttttc atgattgtgt tacctggctt taacgatgct acaaatcagg
     1801 atttatctta ctaattaaac tgcaagttct tgcaactata taaaaattgt gtttgttggt
     1861 ttagtttgtt aactttttat tattcagaag ttgtggtcca gaaagagaac tgaatagtgc
     1921 gaatctgggt gagctgcagt tcactatttc ttgtggataa tttgggttat tagtatatca
     1981 aggatgttta tataaagcac aaatgtgaga tgtgaagtat tacacagtta tggttgatca
     2041 agatggatta tggtgaactg gatcagagtg attcgagcta cataatatgg gactggtact
     2101 tttattttcc aacaaaagtt gctactgaag tttttgtgtt gaatgatgtt gaaaaattga
     2161 cttttgaaag tcaacagtca agagattaag gactatgtgt attgatttgg gcttggaggt
     2221 atgggatcag gatgttgtta tttcaaaaag gtgttcgagt aataaaggtt tagatggtgg
     2281 cacaaatcat cacacttaga gagagactct gatctcaatt tgttttacct tgtaattcag
     2341 agaatacaag attatgaaaa ttaacttgaa attatttcta ta
//
LOCUS       XR_011757384            2453 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840362), transcript variant X4, ncRNA.
ACCESSION   XR_011757384
VERSION     XR_011757384.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2453
                     /gene="LOC139840362"
                     /note="uncharacterized LOC139840362; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840362"
     ncRNA           1..2453
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840362"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139840362"
ORIGIN      
        1 caccctttct tgtaggtttt gcttcccatc ctattatttt ttggccaata tcccttccaa
       61 atctcatttt tgaacaccca catcccattc tttaaaatcg atgcaacagg atctgaagaa
      121 ctcgatttct tccacgcgat tcttcacaaa cgattcaatc tatacagcag atctaaccct
      181 aatcaaattt gcgtccctat tttgttgcga ttaagataag aaaagacata aatcgggatt
      241 ggatcagagc ttggaaagaa agtgtattca gctgtaagtc aattcaccaa acaagtgtat
      301 tcattatctt tttatatcga taaacaaagt tcagaatatc attgtacagt cactgactaa
      361 aagttcaact aaacttcgaa ggtaagttaa gaattcttta tcgtgcttca aagtttaatt
      421 taattcttca atagcaacat gttaagtttg gtgcttctgc aatttatgtt gctgttttgt
      481 gcttcaaagt ttaatttatt actaattttg atttgatgtt ggcctatttt acaatagcaa
      541 catgttaagt tagtgcttta aatgtttgat caatgctaaa tgtgctaatt ttgttgccca
      601 taaccaggga aggttagcac ttatggtgac tactgtgttg ggacaatcaa ggccatgaca
      661 aactaaaagg taacaggcag cacgatacat atattgatct tttgtgcttc ccaaattgac
      721 ttaatgctac gttctataag cagcctccgg ttactttcta acttccaagg taacatggta
      781 ctattaggtt agtttgtaga aaaactttta caccaatgag aggcgggttt gtatgtgatg
      841 agtgtcactg aatacacata ctaaaaggta ttagtaactt ttaatagtaa cattataagt
      901 tttgtgcttc aaatatttga ttaatgctaa ctgcggtaac ctatttatta tgttcataaa
      961 aagggaagat ggaagaatgg caataatggc tatttccacg ttggaacatg gttgctttga
     1021 caaactaaaa ggtcaaaatt gagttgatca aaggttcagt agagtgcatg aggttggatg
     1081 acaatgataa tcccaaagtt aatgaatttc tcagaatggt tgttagcagt ctcaaaaaaa
     1141 tacatttatt attcaagtct tgacctgaag aggttttgtg ttctacacgt ctaacacaat
     1201 gacaaatgtt tactccaagg aaagtgatcc tcgaatgttt gcagaatctg atgcattgag
     1261 tttttgacta gacaagtctt gacaaaactc tgactgggac acgttttcaa ccctaagtgt
     1321 acaaccgtat aagtgattaa tttgttcgta tatatgcacc ttctctaaag taagaattac
     1381 tcgagttcgt attatcatag ttagtagctg gatattaaat tttagtaata tagtactctg
     1441 tattaaattt taagtatcag ggtgattagc tgttatttat tttagaaaat tttaacttca
     1501 taaatagttg cacaagctat atgcttttgt taacttatca ggtgcgtaat cctatcttta
     1561 aaaaagacaa agcaatcaat gattttatat agtatatgtt ttcacgtggt tatcgttttg
     1621 taataagtta tgaacatgtt aattgttgtc aatttatgtt ctatcgacca acttaaatat
     1681 tctattgacc aatttatatt cattgagctt tgctttaagt tatcatcacg aattttgaat
     1741 ttcggctcta tatcccaatt tttgggcttt gtgtgtggta agaaagcaat aggttgcagc
     1801 tgcataggtg gaagaaacaa gtgatgtttt catgattgtg ttacctggct ttaacgatgc
     1861 tacaaatcag gatttatctt actaattaaa ctgcaagttc ttgcaactat ataaaaattg
     1921 tgtttgttgg tttagtttgt taacttttta ttattcagaa gttgtggtcc agaaagagaa
     1981 ctgaatagtg cgaatctggg tgagctgcag ttcactattt cttgtggata atttgggtta
     2041 ttagtatatc aaggatgttt atataaagca caaatgtgag atgtgaagta ttacacagtt
     2101 atggttgatc aagatggatt atggtgaact ggatcagagt gattcgagct acataatatg
     2161 ggactggtac ttttattttc caacaaaagt tgctactgaa gtttttgtgt tgaatgatgt
     2221 tgaaaaattg acttttgaaa gtcaacagtc aagagattaa ggactatgtg tattgatttg
     2281 ggcttggagg tatgggatca ggatgttgtt atttcaaaaa ggtgttcgag taataaaggt
     2341 ttagatggtg gcacaaatca tcacacttag agagagactc tgatctcaat ttgttttacc
     2401 ttgtaattca gagaatacaa gattatgaaa attaacttga aattatttct ata
//
LOCUS       XR_011757385            2119 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840362), transcript variant X5, ncRNA.
ACCESSION   XR_011757385
VERSION     XR_011757385.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2119
                     /gene="LOC139840362"
                     /note="uncharacterized LOC139840362; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840362"
     ncRNA           1..2119
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840362"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139840362"
ORIGIN      
        1 caccctttct tgtaggtttt gcttcccatc ctattatttt ttggccaata tcccttccaa
       61 atctcatttt tgaacaccca catcccattc tttaaaatcg atgcaacagg atctgaagaa
      121 ctcgatttct tccacgcgat tcttcacaaa cgattcaatc tatacagcag atctaaccct
      181 aatcaaattt gcgtccctat tttgttgcga ttaagataag aaaagacata aatcgggatt
      241 ggatcagagc ttggaaagaa agtgtattca gctggaaggt tagcacttat ggtgactact
      301 gtgttgggac aatcaaggcc atgacaaact aaaaggtaac aggcagcacg atacatatat
      361 tgatcttttg tgcttcccaa attgacttaa tgctacgttc tataagcagc ctccggttac
      421 tttctaactt ccaaggtaac atggtactat taggttagtt tgtagaaaaa cttttacacc
      481 aatgagaggc gggtttgtat gtgatgagtg tcactgaata cacatactaa aaggtattag
      541 taacttttaa tagtaacatt ataagttttg tgcttcaaat atttgattaa tgctaactgc
      601 ggtaacctat ttattatgtt cataaaaagg gaagatggaa gaatggcaat aatggctatt
      661 tccacgttgg aacatggttg ctttgacaaa ctaaaaggtc aaaattgagt tgatcaaagg
      721 ttcagtagag tgcatgaggt tggatgacaa tgataatccc aaagttaatg aatttctcag
      781 aatggttgtt agcagtctca aaaaaataca tttattattc aagtcttgac ctgaagaggt
      841 tttgtgttct acacgtctaa cacaatgaca aatgtttact ccaaggaaag tgatcctcga
      901 atgtttgcag aatctgatgc attgagtttt tgactagaca agtcttgaca aaactctgac
      961 tgggacacgt tttcaaccct aagtgtacaa ccgtataagt gattaatttg ttcgtatata
     1021 tgcaccttct ctaaagtaag aattactcga gttcgtatta tcatagttag tagctggata
     1081 ttaaatttta gtaatatagt actctgtatt aaattttaag tatcagggtg attagctgtt
     1141 atttatttta gaaaatttta acttcataaa tagttgcaca agctatatgc ttttgttaac
     1201 ttatcaggtg cgtaatccta tctttaaaaa agacaaagca atcaatgatt ttatatagta
     1261 tatgttttca cgtggttatc gttttgtaat aagttatgaa catgttaatt gttgtcaatt
     1321 tatgttctat cgaccaactt aaatattcta ttgaccaatt tatattcatt gagctttgct
     1381 ttaagttatc atcacgaatt ttgaatttcg gctctatatc ccaatttttg ggctttgtgt
     1441 gtggtaagaa agcaataggt tgcagctgca taggtggaag aaacaagtga tgttttcatg
     1501 attgtgttac ctggctttaa cgatgctaca aatcaggatt tatcttacta attaaactgc
     1561 aagttcttgc aactatataa aaattgtgtt tgttggttta gtttgttaac tttttattat
     1621 tcagaagttg tggtccagaa agagaactga atagtgcgaa tctgggtgag ctgcagttca
     1681 ctatttcttg tggataattt gggttattag tatatcaagg atgtttatat aaagcacaaa
     1741 tgtgagatgt gaagtattac acagttatgg ttgatcaaga tggattatgg tgaactggat
     1801 cagagtgatt cgagctacat aatatgggac tggtactttt attttccaac aaaagttgct
     1861 actgaagttt ttgtgttgaa tgatgttgaa aaattgactt ttgaaagtca acagtcaaga
     1921 gattaaggac tatgtgtatt gatttgggct tggaggtatg ggatcaggat gttgttattt
     1981 caaaaaggtg ttcgagtaat aaaggtttag atggtggcac aaatcatcac acttagagag
     2041 agactctgat ctcaatttgt tttaccttgt aattcagaga atacaagatt atgaaaatta
     2101 acttgaaatt atttctata
//
LOCUS       XR_011757386            2620 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840362), transcript variant X6, ncRNA.
ACCESSION   XR_011757386
VERSION     XR_011757386.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2620
                     /gene="LOC139840362"
                     /note="uncharacterized LOC139840362; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840362"
     ncRNA           1..2620
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840362"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139840362"
ORIGIN      
        1 caccctttct tgtaggtttt gcttcccatc ctattatttt ttggccaata tcccttccaa
       61 atctcatttt tgaacaccca catcccattc tttaaaatcg atgcaacagg atctgaagaa
      121 ctcgatttct tccacgcgat tcttcacaaa cgattcaatc tatacagcag atctaaccct
      181 aatcaaattt gcgtccctat tttgttgcga ttaagataag aaaagacata aatcgggatt
      241 ggatcagagc ttggaaagaa agtgtattca gctgtaagtc aattcaccaa acaagtgtat
      301 tcattatctt tttatatcga taaacaaagt tcagaatatc attgtacagt cactgactaa
      361 aagttcaact aaacttcgaa ggtaagttaa gaattcttta tcgtgcttca aagtttaatt
      421 taattcttca atagcaacat gttaagtttg gtgcttctgc aatttatgtt gctgttttgt
      481 gcttcaaagt ttaatttatt actaattttg atttgatgtt ggcctatttt acaatagcaa
      541 catgttaagt tagtgcttta aatgtttgat caatgctaaa tgtgctaatt ttgttgccca
      601 taaccaggga aggttagcac ttatggtgac tactgtgttg ggacaatcaa ggccatgaca
      661 aactaaaagg tcaatgataa tgtggaaata acaacctgat atgtacacgt tttataaaat
      721 tgtaaaataa caatgttaca ttctattatg ttaacttaaa cttagctaat taaaagacta
      781 ttattttaaa cttgatatcc taaaaattgt tatgagtttg ttgactcaaa tatatctaag
      841 cagcatctat cagcatatgg agcttgagag aacgacatat aggcatagta agaggccaac
      901 atctactaac gttggtgtca actaacttgc aggtaacagg cagcacgata catatattga
      961 tcttttgtgc ttcccaaatt gacttaatgc tacgttctat aagcagcctc cggttacttt
     1021 ctaacttcca aggtaacatg gtactattag gttagtttgt agaaaaactt ttacaccaat
     1081 gagaggcggg tttgtatgtg atgagtgtca ctgaatacac atactaaaag ggaagatgga
     1141 agaatggcaa taatggctat ttccacgttg gaacatggtt gctttgacaa actaaaaggt
     1201 caaaattgag ttgatcaaag gttcagtaga gtgcatgagg ttggatgaca atgataatcc
     1261 caaagttaat gaatttctca gaatggttgt tagcagtctc aaaaaaatac atttattatt
     1321 caagtcttga cctgaagagg ttttgtgttc tacacgtcta acacaatgac aaatgtttac
     1381 tccaaggaaa gtgatcctcg aatgtttgca gaatctgatg cattgagttt ttgactagac
     1441 aagtcttgac aaaactctga ctgggacacg ttttcaaccc taagtgtaca accgtataag
     1501 tgattaattt gttcgtatat atgcaccttc tctaaagtaa gaattactcg agttcgtatt
     1561 atcatagtta gtagctggat attaaatttt agtaatatag tactctgtat taaattttaa
     1621 gtatcagggt gattagctgt tatttatttt agaaaatttt aacttcataa atagttgcac
     1681 aagctatatg cttttgttaa cttatcaggt gcgtaatcct atctttaaaa aagacaaagc
     1741 aatcaatgat tttatatagt atatgttttc acgtggttat cgttttgtaa taagttatga
     1801 acatgttaat tgttgtcaat ttatgttcta tcgaccaact taaatattct attgaccaat
     1861 ttatattcat tgagctttgc tttaagttat catcacgaat tttgaatttc ggctctatat
     1921 cccaattttt gggctttgtg tgtggtaaga aagcaatagg ttgcagctgc ataggtggaa
     1981 gaaacaagtg atgttttcat gattgtgtta cctggcttta acgatgctac aaatcaggat
     2041 ttatcttact aattaaactg caagttcttg caactatata aaaattgtgt ttgttggttt
     2101 agtttgttaa ctttttatta ttcagaagtt gtggtccaga aagagaactg aatagtgcga
     2161 atctgggtga gctgcagttc actatttctt gtggataatt tgggttatta gtatatcaag
     2221 gatgtttata taaagcacaa atgtgagatg tgaagtatta cacagttatg gttgatcaag
     2281 atggattatg gtgaactgga tcagagtgat tcgagctaca taatatggga ctggtacttt
     2341 tattttccaa caaaagttgc tactgaagtt tttgtgttga atgatgttga aaaattgact
     2401 tttgaaagtc aacagtcaag agattaagga ctatgtgtat tgatttgggc ttggaggtat
     2461 gggatcagga tgttgttatt tcaaaaaggt gttcgagtaa taaaggttta gatggtggca
     2521 caaatcatca cacttagaga gagactctga tctcaatttg ttttaccttg taattcagag
     2581 aatacaagat tatgaaaatt aacttgaaat tatttctata
//
LOCUS       XR_011757387            1098 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840363), transcript variant X1, ncRNA.
ACCESSION   XR_011757387
VERSION     XR_011757387.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1098
                     /gene="LOC139840363"
                     /note="uncharacterized LOC139840363; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840363"
     ncRNA           1..1098
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840363"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840363"
ORIGIN      
        1 aacatacaaa caaccgaata aaaatacata taataattct aaaccattga gtgcatctga
       61 ccccgatttc tctggtgaag atccgcccct gccgacggcg aacataaaca ccaaaccacc
      121 gcttatcacc accaaaccgc caccctgact gtggtggatg atgctggtgg tttaagtcca
      181 cctacccact tttttttttt tccctatttc tatataaaaa aaatttgtct gaaaattaaa
      241 ggaggttaaa gatggatgtt gagggaggtt aatgttaatg gtggaaggag gacgatgatg
      301 gtagcggcag taggaagaag gttgaaagtg gtggtgttag tggttgaggt tagaagacga
      361 taatggtggt ggccggaaat taatggcgtt ggtggcagga ggaaatatgg tggcagtgtg
      421 aggaagttga tggtggcggt ggctgatggt ggtaaagtgg tggtggtggt ggtggcgacg
      481 gcggcggtga gaggaggtag gtggtagagt agtggtggtg gcaagaggta tgtggttgtg
      541 ggggtattgg aaaaaaaaaa gggaaaaaaa aaacagtgat ctgcaagagt atgaaagtat
      601 tttttggggt acgtggcggt atacctttgg agggccttgt ccatagttag tgtatatagt
      661 aataatgaga tcaaaaagta aacttcacta tgtcagcctt tcttaacaaa atgtcagggt
      721 ggtaattatg ataatttctt tcgatggggc acgaatgtgg ataacaaatg gtggctgcat
      781 tatggtgact ataggcgtat catacttata tcccctgaag aaagaacaac tctagcagca
      841 gcaatgaacc acctttgcac ataaccaagc gagaactata cgcgaagcct gttgttgact
      901 gctgtcgtct tgcgcttccc tttttcccgt gttgatttgg tgaacggatt actttaattg
      961 gtaatttggt aatgttgtct tttttggttg ttactaattc catttatgaa tctgcttaat
     1021 tcgtgttttg ttgttttaat tgttataatt gcgtttcgaa cgttactgct tctgggttgt
     1081 gatcttagtt gcctcttg
//
LOCUS       XR_011757388            1297 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840363), transcript variant X2, ncRNA.
ACCESSION   XR_011757388
VERSION     XR_011757388.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1297
                     /gene="LOC139840363"
                     /note="uncharacterized LOC139840363; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840363"
     ncRNA           1..1297
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840363"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840363"
ORIGIN      
        1 aacatacaaa caaccgaata aaaatacata taataattct aaaccattga gtgcatctga
       61 ccccgatttc tctggtgaag atccgcccct gccgacggcg aacataaaca ccaaaccacc
      121 gcttatcacc accaaaccgc caccctgact gtggtggatg atgctggtgg tttaagtcca
      181 cctacccact tttttttttt tccctatttc tatataaaaa aaatttgtct gaaaattaaa
      241 ggaggttaaa gatggatgtt gagggaggtt aatgttaatg gtggaaggag gacgatgatg
      301 gtagcggcag taggaagaag gttgaaagtg gtggtgttag tggttgaggt tagaagacga
      361 taatggtggt ggccggaaat taatggcgtt ggtggcagga ggaaatatgg tggcagtgtg
      421 aggaagttga tggtggcggt ggctgatggt ggtaaagtgg tggtggtggt ggtggcgacg
      481 gcggcggtga gaggaggtag gtggtagagt agtggtggtg gcaagaggta tgtggttgtg
      541 ggggtattgg aaaaaaaaaa gggaaaaaaa aaacagtgat ctgcaagagt atgaaagtat
      601 tttttggggt acgtggcggt atacctttgg agggccttgt ccatagttag tgtatatagt
      661 aataatgaga tcaaaaagta aacttcacta tgtcagcctt tcttaacaaa atgtcagggt
      721 ggtaattatg ataatttctt tcgatggggc acgaatgtgg ataacaaatg gtggctgcat
      781 tatggtgact ataggcgtat catacttata tcccctgaag aaagaacaac tctagcagca
      841 gcaatgaacc acctttgcac ataaccaagc gagaactata cgcgaagcct gttgttgact
      901 gctgtcgtct tgcgcttccc tttttcccgt gttgatttgg tgaacggatt actttaattg
      961 gtaatttggt ttgtgtgttt tgatttacga tgttgctgat tatcggctac gatgatgttt
     1021 atgctagcca tcacttctta ctgggtaaat aatcacaaag gcgggctaat acgttattaa
     1081 tgcataaaat cattttagaa tcacattaaa ttgtaatttg tctgcccatt taaaagacat
     1141 tcgcaaaaga tgaaaacgtt aatttagcaa atgttgtcaa caaagttgtt acttttataa
     1201 ttagtattgt aacagtttga ctggatgtgt agttcacctg actatttgac acatattggg
     1261 ttaacttgcg tgctcaatag gtgatggctt aactaag
//
LOCUS       XR_011757389            1289 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840363), transcript variant X3, ncRNA.
ACCESSION   XR_011757389
VERSION     XR_011757389.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1289
                     /gene="LOC139840363"
                     /note="uncharacterized LOC139840363; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840363"
     ncRNA           1..1289
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840363"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139840363"
ORIGIN      
        1 aacatacaaa caaccgaata aaaatacata taataattct aaaccattga gtgcatctga
       61 ccccgatttc tctggtgaag atccgcccct gccgacggcg aacataaaca ccaaaccacc
      121 gcttatcacc accaaaccgc caccctgact gtggtggatg atgctggtgg tttaagtcca
      181 cctacccact tttttttttt tccctatttc tatataaaaa aaatttgtct gaaaattaaa
      241 ggaggttaaa gatggatgtt gagggaggtt aatgttaatg gtggaaggag gacgatgatg
      301 gtagcggcag taggaagaag gttgaaagtg gtggtgttag tggttgaggt tagaagacga
      361 taatggtggt ggccggaaat taatggcgtt ggtggcagga ggaaatatgg tggcagtgtg
      421 aggaagttga tggtggcggt ggctgatggt ggtaaagtgg tggtggtggt ggtggcgacg
      481 gcggcggtga gaggaggtag gtggtagagt agtggtggtg gcaagaggta tgtggttgtg
      541 ggggtattgg aaaaaaaaaa gggaaaaaaa aaacagtgat ctgcaagagt atgaaagtat
      601 tttttggggt acgtggcggt atacctttgg agggccttgt ccatagttag tgtatatagt
      661 aataatgaga tcaaaaagta aacttcacta tgtcagcctt tcttaacaaa atgtcagggt
      721 ggtaattatg ataatttctt tcgatggggc acgaatgtgg ataacaaatg gtggctgcat
      781 tatggtgact ataggcgtat catacttata tcccctgaag aaagaacaac tctagcagca
      841 gcaatgaacc acctttgcac ataaccaagc gagaactata cgcgaagcct gttgttgact
      901 gctgtcgtct tgcgcttccc tttttcccgt gttgatttgg tgaacggatt actttaattg
      961 gtttgtgtgt tttgatttac gatgttgctg attatcggct acgatgatgt ttatgctagc
     1021 catcacttct tactgggtaa ataatcacaa aggcgggcta atacgttatt aatgcataaa
     1081 atcattttag aatcacatta aattgtaatt tgtctgccca tttaaaagac attcgcaaaa
     1141 gatgaaaacg ttaatttagc aaatgttgtc aacaaagttg ttacttttat aattagtatt
     1201 gtaacagttt gactggatgt gtagttcacc tgactatttg acacatattg ggttaacttg
     1261 cgtgctcaat aggtgatggc ttaactaag
//
LOCUS       XM_071830628            2230 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840364), mRNA.
ACCESSION   XM_071830628
VERSION     XM_071830628.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2230
                     /gene="LOC139840364"
                     /note="uncharacterized LOC139840364; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840364"
     CDS             36..2036
                     /gene="LOC139840364"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686729.1"
                     /db_xref="GeneID:139840364"
                     /translation="MADAVQYKLERMVNELDDLERRGLFSRREIGEIVKQRRKFEYRL
                     KRPSPLKEDYLAYIDYEKSVDALRILRKKSLVRELNNNNKKSEDGKRVVKMKQSVSDF
                     AGLSRIVDIYRLATNRFKGDIQLWFQYLEFCKQNRNGHMKKVLAQVIKFHPKVADVWI
                     YAAMWEFDHNLNAAAARALMQSGLRCCPNSEALWVEYLRMELTYLNKLSARRAALGED
                     VGMLVRDRGDPQEDKEWREENKELFMSIDEGNDEVYNDDLDDVQNKELKEKIDVFQEQ
                     GLNILQTIYRCAVEALPSSFGLRTQFLEILEATNLANSQSIQNEILADMKNEFSKEPG
                     YWDWFAKYVAAGRKSAKVVSKELDVGCLFDAVQVYNEGLEIVPSSTMFNLCIKFLMDA
                     IGQNGSSQSCCMLSDLKSDKYIDPVAHVLTVFEDAQRKGCITEDLACQHISFLLELGR
                     LDDARNLAEKFCCGGELPEAVNLWVLRLSIETRRIGTPSKADDLSFVFDLLQNALKNI
                     SVSKAESLWLMGLKYFSNQKSYFEKLVDISISLLMRDGGSDDGFSLSSAIVNFALQRN
                     GIQSARDMYKRFLALPRPGLALYRNCIEMDLNIASSSASAKKVHLVEEARKLYEAALS
                     TYNQDASLWQDYHSMVSKMGTSETAAAVHWRARKTLKGNATF"
     misc_feature    36..>839
                     /gene="LOC139840364"
                     /note="Uncharacterized conserved protein, contains HAT
                     (Half-A-TPR) repeat [General function prediction only];
                     Region: COG5191"
                     /db_xref="CDD:227518"
ORIGIN      
        1 accgccgccg aaaatcaaat tacgacaacc taatcatggc ggacgcagta caatacaaac
       61 tagagcgtat ggtgaatgag ctggacgacc ttgaacggcg tggcttattc tcccgtcgtg
      121 aaatcggcga aatagtgaaa caacggcgga aatttgagta cagactgaaa cgtcctagtc
      181 cgttaaaaga agattactta gcttacatcg attatgagaa atctgtcgac gcgcttcgta
      241 tccttcgtaa gaaatcgttg gtgcgtgaac tcaataataa taataaaaaa agtgaagacg
      301 gaaaacgcgt tgtaaagatg aaacagtcag tttctgattt cgcaggtctt tcgaggatcg
      361 ttgatattta tcgattagct actaataggt ttaaaggtga tattcagttg tggtttcagt
      421 atctcgagtt ttgtaaacaa aacagaaatg gacatatgaa aaaggttttg gctcaggtga
      481 ttaaatttca tccaaaagta gctgatgttt ggatatatgc tgctatgtgg gagtttgatc
      541 ataacctaaa tgctgcagct gcccgtgcgc ttatgcaaag tggtttgaga tgttgcccaa
      601 attccgaagc tctttgggtt gaatatcttc gaatggaact cacatacctt aataagttaa
      661 gtgctcgtag ggctgctctt ggagaggatg taggaatgtt ggttcgtgat cggggggatc
      721 ctcaagaaga taaagaatgg agagaggaaa ataaagaatt atttatgtcg attgatgaag
      781 gaaatgatga agtttataat gatgatttag atgatgtaca aaataaggaa ctgaaggaga
      841 aaattgatgt ctttcaggag caaggattga acattcttca aactatttat agatgtgcag
      901 tggaagctct tccatctagt tttggcctga gaacgcagtt tcttgaaata ttggaggcaa
      961 ctaatttggc aaattctcaa agtatacaaa atgagatact tgctgatatg aaaaatgaat
     1021 tttctaaaga accaggatac tgggactggt ttgcaaaata cgttgcagca ggacgtaaga
     1081 gcgcaaaagt tgtaagcaaa gaattagacg ttggttgttt attcgatgcg gttcaggttt
     1141 ataatgaggg tttagagatt gtaccgtcat caacgatgtt caatttatgt atcaaattct
     1201 taatggatgc aattggtcaa aatggaagca gtcaaagttg ttgtatgctt tctgatttaa
     1261 aatcagacaa atatatagat cctgttgcac atgttttaac cgtctttgaa gacgctcaaa
     1321 gaaaggggtg cattactgaa gatcttgcct gccaacacat atcatttctg ttggaattag
     1381 gtaggttaga cgatgcaaga aatttggcag aaaagttttg ttgtggtgga gaacttccag
     1441 aagcagttaa tttgtgggtc ctacgcctct caatagaaac aagacgtatc gggactccaa
     1501 gcaaagctga tgatctttcg tttgtgtttg atcttttgca aaatgcactt aaaaatattt
     1561 ctgtttcaaa agcagagagc ctgtggctta tggggttgaa gtatttctca aatcagaaat
     1621 cgtattttga gaagctagtg gatatatcta taagtttatt gatgagagat ggtggtagcg
     1681 atgacggttt ctctctgtca tctgcgatag taaattttgc tctacagaga aatggaattc
     1741 agagtgcaag agacatgtat aagcggtttc ttgcgttacc tcggcctggg cttgctttat
     1801 atagaaactg cattgaaatg gacctgaaca ttgcatcttc ttctgctagt gctaagaagg
     1861 ttcaccttgt agaagaagcc cgaaagttat acgaagctgc tctttcaaca tataaccaag
     1921 atgcgagttt gtggcaagat tatcattcta tggtgtccaa gatggggacg tccgaaactg
     1981 ctgcagctgt gcattggcgg gcacgaaaga cacttaaagg caatgctaca ttttaagaaa
     2041 ttattacact aatgggagat ttgcatttgt gaatcactcg caatttttgc aggctttgag
     2101 aattttaggc gcgtttgatt aaaaactcgg aaaatggctt atttgatatg ttgtgattga
     2161 gactgttaaa taatttgata aatttttttc tacattttac ttatattttg tatcattatt
     2221 gggttttata
//
LOCUS       XM_071830629             765 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger A20 and AN1
            domain-containing stress-associated protein 1-like (LOC139840365),
            mRNA.
ACCESSION   XM_071830629
VERSION     XM_071830629.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..765
                     /gene="LOC139840365"
                     /note="zinc finger A20 and AN1 domain-containing
                     stress-associated protein 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840365"
     CDS             94..579
                     /gene="LOC139840365"
                     /codon_start=1
                     /product="zinc finger A20 and AN1 domain-containing
                     stress-associated protein 1-like"
                     /protein_id="XP_071686730.1"
                     /db_xref="GeneID:139840365"
                     /translation="MGSDANKMNDGTSFQPSEPTPCATGCGFFGTAATNGYCSKCYRD
                     IRAHEEQAVSAIAAVDKFVNNVVTLPLPVPLSESTPSGSEPVHVVEPAVEVKKVSNRC
                     LTCNKKVGVMGFKCRCGDMFCGSHRYPETHDCEFDFKKTGKDAIAKANPVIKADKVNR
                     I"
     misc_feature    154..222
                     /gene="LOC139840365"
                     /note="A20-like zinc finger; Region: zf-A20; pfam01754"
                     /db_xref="CDD:460313"
     misc_feature    397..510
                     /gene="LOC139840365"
                     /note="AN1-like Zinc finger; Region: ZnF_AN1; smart00154"
                     /db_xref="CDD:197545"
     polyA_site      765
                     /gene="LOC139840365"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgaaattcc aaaactttta atctccatta aaaaacctct cttaaaagtt ttaatccctc
       61 tacaaatttt actaaatttc acatattata atcatgggtt ctgatgctaa caagatgaac
      121 gatggaacaa gtttccaacc gtccgaacca acaccgtgtg caaccggttg cggttttttc
      181 ggaaccgctg ccacaaacgg ttactgttcc aagtgttacc gtgacatccg ggcccacgaa
      241 gaacaagctg tatctgctat agctgctgtt gacaaatttg ttaacaacgt tgttaccttg
      301 ccgttaccgg ttccgttatc tgaatctaca ccatctggat ctgaaccggt tcatgttgtt
      361 gaaccggcgg ttgaagtgaa aaaagtttcg aaccggtgtt tgacttgtaa taaaaaggtt
      421 ggtgtgatgg ggttcaagtg tagatgtggg gatatgtttt gtggaagtca taggtacccg
      481 gagactcatg attgtgaatt tgattttaag aaaaccggta aagatgctat tgcaaaagcg
      541 aacccggtta ttaaggctga taaggtgaac cggatctgaa ccgcttgctg ctattattag
      601 gggttggtgg atggtgtatg ttaggtagtt tttatcttta ttattatttt tattttttta
      661 gattttatta ttgtgattga atttgataca attaattgtt gattgtgaaa tataaatgga
      721 tggatggatg tttacttgtt tatttgtagc ctttttatcg tggta
//
LOCUS       XM_071830630            2038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein CHUP1,
            chloroplastic-like (LOC139840366), mRNA.
ACCESSION   XM_071830630
VERSION     XM_071830630.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2038
                     /gene="LOC139840366"
                     /note="protein CHUP1, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840366"
     CDS             163..1875
                     /gene="LOC139840366"
                     /codon_start=1
                     /product="protein CHUP1, chloroplastic-like"
                     /protein_id="XP_071686731.1"
                     /db_xref="GeneID:139840366"
                     /translation="MGRGKKDIQPVVLKIGLALVFSISGMIFTFIKNKSIKPPQSSDT
                     SNQGSSRRGAKSENQASHRTPNTCLFDPLATGKDESPNSMLDLSLSPKTDENLYLLPE
                     FGDLVKEFDITAMKVNLDRRISEPESESPAKGNECEIKEKHEQEIKNLTNMVKILKER
                     ETNLEIQLLAYYGLQEQETTVKELQNRLKLNNMEAKLLSLKVESLKNDNKRLEAQLTG
                     YNKVVADLEAAQGKIKDLKKKLRLETAQNKERSLDLQQRVQKMQEYEHKSEVGIESEI
                     RSSLRKLLDMETEADELRKLNHSLQVEKSKLTQRLEHVQNLATSVSRDESMVKLKEER
                     ECLRQQNEDLTRVIDQLQADRCSDVEELVYLRWINACLRYELRNQQPDPGKTTARDLS
                     KTLSPRSEQKAKQLILEYANKQSLPELDDDQWSGPQSSSNLTDSSEPDESLTDYSSHH
                     HHHHQPHHSNHKFFGKLMKFLRGKDGHNRNSSVEQTESVEDVNSCSESSFGNLVLSSK
                     HSFDSQKLIYRLSDVGVHRRIDSIAEDGNIDKRSELVKYAEVLKDSSPKPTAKDRRRS
                     MSLS"
     misc_feature    <592..>1260
                     /gene="LOC139840366"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     polyA_site      2038
                     /gene="LOC139840366"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaacactacg ttcttaaaca tcaatgctcc acccgttagt tcccccataa ctatgattta
       61 ggtcagaata ttaagtcttt catttttttt gttcgcatgg gtcatgctct gttttatgta
      121 aagatgtaaa tgaaattagg gtttgaattt gaaatttgaa ttatgggaag aggtaaaaaa
      181 gacatacaac cagtggttct gaaaattggg cttgctttag tgttttcaat tagtggaatg
      241 atttttacat ttatcaaaaa caaaagtatc aagccacctc aatcttcaga caccagtaat
      301 caaggaagtt caagaagggg tgcgaagagt gagaatcaag catctcatag aacaccaaat
      361 acttgcttat ttgatccttt ggctactggt aaagatgagt cgcctaattc catgctagat
      421 ctttctcttt ctcctaagac agatgaaaat ttatatcttc tacctgaatt tggcgaccta
      481 gtgaaagaat tcgatattac tgccatgaaa gtgaatctag accgtcgaat atcagaaccg
      541 gaatccgagt cgccggcaaa aggaaatgaa tgtgagataa aagaaaaaca tgagcaagaa
      601 atcaagaatc taacaaacat ggtcaaaatt cttaaagaaa gagaaacaaa tcttgagata
      661 cagttactcg catactatgg tcttcaagaa caagaaacta ctgtgaaaga gcttcaaaat
      721 cgtcttaaat tgaacaacat ggaggctaag cttcttagtt taaaagtgga gtctttaaag
      781 aatgataaca agagattaga agcacaattg acgggttata ataaagttgt agcggatctt
      841 gaagctgcac agggcaaaat taaagatctt aagaagaaac taagattaga aactgcacag
      901 aacaaagaac ggagtttgga tcttcaacaa cgagttcaaa agatgcaaga atatgaacat
      961 aaaagtgaag taggtattga gtcagagatt cgatcaagtc ttcgtaaatt gttggacatg
     1021 gaaaccgaag ctgatgaatt gagaaagttg aaccatagtt tgcaagtaga aaagtcaaag
     1081 ttgactcaaa ggttggagca tgttcaaaac cttgccacat cagtttcaag agatgaatca
     1141 atggtaaagc ttaaagaaga aagggagtgt ttgaggcaac aaaacgaaga tttaaccagg
     1201 gttatcgacc aacttcaagc tgacagatgt agtgacgttg aagaacttgt atatcttaga
     1261 tggattaacg cttgcttaag gtacgaactt agaaaccaac aaccagatcc tggtaaaaca
     1321 actgctcgag acctcagtaa aacactaagc ccgagatcag aacaaaaagc taaacaacta
     1381 atcctcgaat acgccaacaa acaaagctta cccgaactcg atgatgatca atggtcaggt
     1441 cctcaatcct cttctaacct cacagattct agcgaacccg atgaatcctt gacagattat
     1501 tcatcacatc atcatcatca tcatcaacct catcatagca atcataagtt tttcggtaaa
     1561 ctaatgaagt ttttaagagg aaaagatggt cataacagaa actcgtctgt tgaacaaacg
     1621 gaatcagtag aagatgtcaa ttcgtgtagc gagtcatctt ttgggaattt agtgttgtcg
     1681 tcgaaacatt cgtttgattc tcaaaagttg atatataggc ttagtgacgt tggagtgcac
     1741 cgaaggattg attcgattgc agaagatggt aatattgaca aaagatcgga gcttgtgaaa
     1801 tatgcagaag tgttgaaaga ctcgagtccg aagccaactg ccaaagatcg acgaagatca
     1861 atgtcgttaa gttagttaac ataatagatt gattagaaat gtaaccaatt gagatggtat
     1921 atgtttataa cttagaaacc acattattaa caacttgatg aattgatagt tcagctaaat
     1981 atatatactc cgtatatgat atgaaaggat gtatggtgat tttagacttt atgtgata
//
LOCUS       XM_071830631            1708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides patatin-like protein 2
            (LOC139840367), transcript variant X1, mRNA.
ACCESSION   XM_071830631
VERSION     XM_071830631.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1708
                     /gene="LOC139840367"
                     /note="patatin-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 44
                     Proteins"
                     /db_xref="GeneID:139840367"
     CDS             115..1452
                     /gene="LOC139840367"
                     /codon_start=1
                     /product="patatin-like protein 2 isoform X1"
                     /protein_id="XP_071686732.1"
                     /db_xref="GeneID:139840367"
                     /translation="MSFKDQGPRSPLQPPTYGNLITILSIDGGGVRGIIPSVILEFLE
                     TELQKVDGEKARIADYFDVIAGTSTGGLVTAMLTAPNEEGRPIFAAKDVKDFYLEHCP
                     KIFPHSGNILAPATNVIKALSGPKYDGEYLHNIIQEKLQETRLHQTLTNVVIPTFDIK
                     YLQPTIFSTYQLEKVPSIDAKLSDICIGTSAAPTYLPSHSFQIDDSEGNLLREFNLID
                     GSVAANNPTLVAISEVTTEITRGSPNFFPIKPTEYGRFLVLSLGTGSAKFQEKYDATK
                     SSNWGIVGWLAGGGSTPIVDVFTQASSDMVDLHISSVFQALHSEENYLRIQDDTLTGD
                     IASMDLATPENLQNLVKVGEELLKKTVTKVNLGTGVTEPYYHTTNEMALTKFAGILHR
                     EKNVRELRSPNTNKGVIDKTKLIAEQTAHSRRTPALSNTIDHSQQDLPELDTK"
     misc_feature    166..1221
                     /gene="LOC139840367"
                     /note="Patatin-like phospholipase of plants; Region:
                     Pat17_isozyme_like; cd07214"
                     /db_xref="CDD:132853"
     misc_feature    order(199..204,208..210,316..318,766..768)
                     /gene="LOC139840367"
                     /note="active site"
                     /db_xref="CDD:132853"
     misc_feature    310..324
                     /gene="LOC139840367"
                     /note="nucleophile elbow; other site"
                     /db_xref="CDD:132853"
     polyA_site      1708
                     /gene="LOC139840367"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accttatcct caatcatcgc acacaacaac tattaataat ccattatttt cgatatcaat
       61 tccttctaca aaatcaaggt ttacatctta aaaaatttca gtaattaaac aaccatgtct
      121 tttaaagatc aaggacctcg atcacctttg caaccaccaa catacgggaa tctaatcacg
      181 attcttagca tagatggtgg tggagtacga ggaatcatcc caagtgttat tctcgagttt
      241 ttggaaaccg agctacagaa agtagacggc gaaaaagcaa gaattgcaga ttatttcgac
      301 gtgattgctg gaactagcac cggtggtctt gttactgcca tgttaaccgc tccgaacgaa
      361 gaaggtcgtc cgatttttgc ggctaaagat gtaaaagatt tttatctgga acattgtccc
      421 aaaatcttcc cacatagcgg caatattctg gctcctgcta caaatgtaat caaagcttta
      481 tctggaccaa aatacgatgg tgaatacctt cataatatta ttcaagaaaa gctacaagaa
      541 accagacttc atcaaacatt aacgaatgtc gtgattccaa catttgacat caaatacttg
      601 cagcctacaa tcttctcaac ttaccagtta gagaaggtac cgagcattga tgcgaaatta
      661 tcggatatat gcattggaac gtcagcagcc ccaacctatc ttccttcaca ttcgttccaa
      721 attgatgatt ctgaaggaaa tttactgaga gaattcaatc ttatcgatgg gagtgttgct
      781 gcaaacaatc cgactttggt tgcaataagc gaggtaacta cggaaataac tagaggaagt
      841 ccgaacttct tcccaataaa gccaacagag tatggccggt ttctagtttt gtcgttgggc
      901 actgggtcag ctaaatttca agagaagtat gatgcaacaa aatcgtctaa ttggggcatt
      961 gtagggtggt tagctggtgg tggttcgact ccgatagtag acgtttttac tcaagcaagt
     1021 agtgatatgg ttgacttgca tatctctagt gtctttcaag cccttcattc agaagaaaat
     1081 tatcttcgca ttcaggatga tactttaact ggtgacatag cttcgatgga tttagctact
     1141 ccagaaaact tacaaaatct ggtgaaagtg ggtgaggaat tgttgaaaaa aacagttact
     1201 aaagtgaatt taggcacagg cgtaacagaa ccttattatc acactacaaa tgagatggct
     1261 ttaaccaagt ttgcgggaat acttcacagg gagaaaaatg tgcgagaact tagatcgcca
     1321 aatactaata aaggagtgat tgataaaaca aaattgattg cagaacaaac tgcacattct
     1381 cgaagaacac cggcactctc taatacaatt gatcactctc aacaagatct gccagagctt
     1441 gacacaaagt aatcaagctg tcttctatca gtgaaggtta tttaataata tgttataatt
     1501 tctagctatg agctttaagc ttcctgaata gttgcatgaa ttctaaatag gtatatgtaa
     1561 ggtctgaggt taagatgtac gagatacaaa gataaatgta tgatggttga ctactttaaa
     1621 caattgaaat aaaaacacta aatgatatcc caaacgttgg ttgatgttgt ttgttatggc
     1681 catagcccat atatcgttag ttcatatc
//
LOCUS       XM_071830632            1612 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides patatin-like protein 2
            (LOC139840367), transcript variant X2, mRNA.
ACCESSION   XM_071830632
VERSION     XM_071830632.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1612
                     /gene="LOC139840367"
                     /note="patatin-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840367"
     CDS             116..1243
                     /gene="LOC139840367"
                     /codon_start=1
                     /product="patatin-like protein 2 isoform X2"
                     /protein_id="XP_071686733.1"
                     /db_xref="GeneID:139840367"
                     /translation="MSFKDQGPRSPLQPPTYGNLITILSIDGGGVRGIIPSVILEFLE
                     TELQKVDGEKARIADYFDVIAGTSTGGLVTAMLTAPNEEGRPIFAAKDVKDFYLEHCP
                     KIFPHSGNILAPATNVIKALSGPKYDGEYLHNIIQEKLQETRLHQTLTNVVIPTFDIK
                     YLQPTIFSTYQLEKVPSIDAKLSDICIGTSAAPTYLPSHSFQIDDSEGNLLREFNLID
                     GSVAANNPTLVAISEVTTEITRGSPNFFPIKPTEYGRFLVLSLGTGSAKFQEKYDATK
                     SSNWGIVGWLAGGGSTPIVDVFTQASSDMVDLHISSVFQALHSEENYLRIQDDTLTGD
                     IASMDLATPENLQNLVKVGLREYFTGRKMCENLDRQILIKE"
     misc_feature    167..1174
                     /gene="LOC139840367"
                     /note="Patatin-like phospholipase of plants; Region:
                     Pat17_isozyme_like; cd07214"
                     /db_xref="CDD:132853"
     misc_feature    order(200..205,209..211,317..319,767..769)
                     /gene="LOC139840367"
                     /note="active site"
                     /db_xref="CDD:132853"
     misc_feature    311..325
                     /gene="LOC139840367"
                     /note="nucleophile elbow; other site"
                     /db_xref="CDD:132853"
     polyA_site      1612
                     /gene="LOC139840367"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taccttatcc tcaatcatcg cacacaacaa ctattaataa tccattattt tcgatatcaa
       61 ttccttctac aaaatcaagg tttacatctt aaaaaatttc agtaattaaa caaccatgtc
      121 ttttaaagat caaggacctc gatcaccttt gcaaccacca acatacggga atctaatcac
      181 gattcttagc atagatggtg gtggagtacg aggaatcatc ccaagtgtta ttctcgagtt
      241 tttggaaacc gagctacaga aagtagacgg cgaaaaagca agaattgcag attatttcga
      301 cgtgattgct ggaactagca ccggtggtct tgttactgcc atgttaaccg ctccgaacga
      361 agaaggtcgt ccgatttttg cggctaaaga tgtaaaagat ttttatctgg aacattgtcc
      421 caaaatcttc ccacatagcg gcaatattct ggctcctgct acaaatgtaa tcaaagcttt
      481 atctggacca aaatacgatg gtgaatacct tcataatatt attcaagaaa agctacaaga
      541 aaccagactt catcaaacat taacgaatgt cgtgattcca acatttgaca tcaaatactt
      601 gcagcctaca atcttctcaa cttaccagtt agagaaggta ccgagcattg atgcgaaatt
      661 atcggatata tgcattggaa cgtcagcagc cccaacctat cttccttcac attcgttcca
      721 aattgatgat tctgaaggaa atttactgag agaattcaat cttatcgatg ggagtgttgc
      781 tgcaaacaat ccgactttgg ttgcaataag cgaggtaact acggaaataa ctagaggaag
      841 tccgaacttc ttcccaataa agccaacaga gtatggccgg tttctagttt tgtcgttggg
      901 cactgggtca gctaaatttc aagagaagta tgatgcaaca aaatcgtcta attggggcat
      961 tgtagggtgg ttagctggtg gtggttcgac tccgatagta gacgttttta ctcaagcaag
     1021 tagtgatatg gttgacttgc atatctctag tgtctttcaa gcccttcatt cagaagaaaa
     1081 ttatcttcgc attcaggatg atactttaac tggtgacata gcttcgatgg atttagctac
     1141 tccagaaaac ttacaaaatc tggtgaaagt gggtttgcgg gaatacttca cagggagaaa
     1201 aatgtgcgag aacttagatc gccaaatact aataaaggag tgattgataa aacaaaattg
     1261 attgcagaac aaactgcaca ttctcgaaga acaccggcac tctctaatac aattgatcac
     1321 tctcaacaag atctgccaga gcttgacaca aagtaatcaa gctgtcttct atcagtgaag
     1381 gttatttaat aatatgttat aatttctagc tatgagcttt aagcttcctg aatagttgca
     1441 tgaattctaa ataggtatat gtaaggtctg aggttaagat gtacgagata caaagataaa
     1501 tgtatgatgg ttgactactt taaacaattg aaataaaaac actaaatgat atcccaaacg
     1561 ttggttgatg ttgtttgtta tggccatagc ccatatatcg ttagttcata tc
//
LOCUS       XM_071830633            1571 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides patatin-like protein 2
            (LOC139840367), transcript variant X3, mRNA.
ACCESSION   XM_071830633
VERSION     XM_071830633.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1571
                     /gene="LOC139840367"
                     /note="patatin-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840367"
     CDS             203..1315
                     /gene="LOC139840367"
                     /codon_start=1
                     /product="patatin-like protein 2 isoform X3"
                     /protein_id="XP_071686734.1"
                     /db_xref="GeneID:139840367"
                     /translation="MLTAPNEEGRPIFAAKDVKDFYLEHCPKIFPHSGNILAPATNVI
                     KALSGPKYDGEYLHNIIQEKLQETRLHQTLTNVVIPTFDIKYLQPTIFSTYQLEKVPS
                     IDAKLSDICIGTSAAPTYLPSHSFQIDDSEGNLLREFNLIDGSVAANNPTLVAISEVT
                     TEITRGSPNFFPIKPTEYGRFLVLSLGTGSAKFQEKYDATKSSNWGIVGWLAGGGSTP
                     IVDVFTQASSDMVDLHISSVFQALHSEENYLRIQDDTLTGDIASMDLATPENLQNLVK
                     VGEELLKKTVTKVNLGTGVTEPYYHTTNEMALTKFAGILHREKNVRELRSPNTNKGVI
                     DKTKLIAEQTAHSRRTPALSNTIDHSQQDLPELDTK"
     misc_feature    203..1084
                     /gene="LOC139840367"
                     /note="Patatins and Phospholipases; Region:
                     Patatin_and_cPLA2; cl11396"
                     /db_xref="CDD:416256"
     polyA_site      1571
                     /gene="LOC139840367"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaggacctcg atcacctttg caaccaccaa catacgggaa tctaatcacg attcttagca
       61 tagatggtgg tggagtacga ggaatcatcc caagtgttat tctcgagttt ttggaaaccg
      121 agctacagac ggcgaaaaag caagaattgc agattatttc gacgtgattg ctggaactag
      181 caccggtggt cttgttactg ccatgttaac cgctccgaac gaagaaggtc gtccgatttt
      241 tgcggctaaa gatgtaaaag atttttatct ggaacattgt cccaaaatct tcccacatag
      301 cggcaatatt ctggctcctg ctacaaatgt aatcaaagct ttatctggac caaaatacga
      361 tggtgaatac cttcataata ttattcaaga aaagctacaa gaaaccagac ttcatcaaac
      421 attaacgaat gtcgtgattc caacatttga catcaaatac ttgcagccta caatcttctc
      481 aacttaccag ttagagaagg taccgagcat tgatgcgaaa ttatcggata tatgcattgg
      541 aacgtcagca gccccaacct atcttccttc acattcgttc caaattgatg attctgaagg
      601 aaatttactg agagaattca atcttatcga tgggagtgtt gctgcaaaca atccgacttt
      661 ggttgcaata agcgaggtaa ctacggaaat aactagagga agtccgaact tcttcccaat
      721 aaagccaaca gagtatggcc ggtttctagt tttgtcgttg ggcactgggt cagctaaatt
      781 tcaagagaag tatgatgcaa caaaatcgtc taattggggc attgtagggt ggttagctgg
      841 tggtggttcg actccgatag tagacgtttt tactcaagca agtagtgata tggttgactt
      901 gcatatctct agtgtctttc aagcccttca ttcagaagaa aattatcttc gcattcagga
      961 tgatacttta actggtgaca tagcttcgat ggatttagct actccagaaa acttacaaaa
     1021 tctggtgaaa gtgggtgagg aattgttgaa aaaaacagtt actaaagtga atttaggcac
     1081 aggcgtaaca gaaccttatt atcacactac aaatgagatg gctttaacca agtttgcggg
     1141 aatacttcac agggagaaaa atgtgcgaga acttagatcg ccaaatacta ataaaggagt
     1201 gattgataaa acaaaattga ttgcagaaca aactgcacat tctcgaagaa caccggcact
     1261 ctctaataca attgatcact ctcaacaaga tctgccagag cttgacacaa agtaatcaag
     1321 ctgtcttcta tcagtgaagg ttatttaata atatgttata atttctagct atgagcttta
     1381 agcttcctga atagttgcat gaattctaaa taggtatatg taaggtctga ggttaagatg
     1441 tacgagatac aaagataaat gtatgatggt tgactacttt aaacaattga aataaaaaca
     1501 ctaaatgata tcccaaacgt tggttgatgt tgtttgttat ggccatagcc catatatcgt
     1561 tagttcatat c
//
LOCUS       XM_071830634            1500 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides patatin-like protein 2
            (LOC139840367), transcript variant X4, mRNA.
ACCESSION   XM_071830634
VERSION     XM_071830634.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1500
                     /gene="LOC139840367"
                     /note="patatin-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840367"
     CDS             168..1244
                     /gene="LOC139840367"
                     /codon_start=1
                     /product="patatin-like protein 2 isoform X4"
                     /protein_id="XP_071686735.1"
                     /db_xref="GeneID:139840367"
                     /translation="MVVEYEESSQVLFSSFWKPSYSNILAPATNVIKALSGPKYDGEY
                     LHNIIQEKLQETRLHQTLTNVVIPTFDIKYLQPTIFSTYQLEKVPSIDAKLSDICIGT
                     SAAPTYLPSHSFQIDDSEGNLLREFNLIDGSVAANNPTLVAISEVTTEITRGSPNFFP
                     IKPTEYGRFLVLSLGTGSAKFQEKYDATKSSNWGIVGWLAGGGSTPIVDVFTQASSDM
                     VDLHISSVFQALHSEENYLRIQDDTLTGDIASMDLATPENLQNLVKVGEELLKKTVTK
                     VNLGTGVTEPYYHTTNEMALTKFAGILHREKNVRELRSPNTNKGVIDKTKLIAEQTAH
                     SRRTPALSNTIDHSQQDLPELDTK"
     misc_feature    <180..1013
                     /gene="LOC139840367"
                     /note="Patatins and Phospholipases; Region:
                     Patatin_and_cPLA2; cl11396"
                     /db_xref="CDD:416256"
     polyA_site      1500
                     /gene="LOC139840367"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caactattaa taatccatta ttttcgatat caattccttc tacaaaatca aggtttacat
       61 cttaaaaaat ttcagtaatt aaacaaccat gtcttttaaa gatcaaggac ctcgatcacc
      121 tttgcaacca ccaacatacg ggaatctaat cacgattctt agcatagatg gtggtggagt
      181 acgaggaatc atcccaagtg ttattctcga gtttttggaa accgagctac agcaatattc
      241 tggctcctgc tacaaatgta atcaaagctt tatctggacc aaaatacgat ggtgaatacc
      301 ttcataatat tattcaagaa aagctacaag aaaccagact tcatcaaaca ttaacgaatg
      361 tcgtgattcc aacatttgac atcaaatact tgcagcctac aatcttctca acttaccagt
      421 tagagaaggt accgagcatt gatgcgaaat tatcggatat atgcattgga acgtcagcag
      481 ccccaaccta tcttccttca cattcgttcc aaattgatga ttctgaagga aatttactga
      541 gagaattcaa tcttatcgat gggagtgttg ctgcaaacaa tccgactttg gttgcaataa
      601 gcgaggtaac tacggaaata actagaggaa gtccgaactt cttcccaata aagccaacag
      661 agtatggccg gtttctagtt ttgtcgttgg gcactgggtc agctaaattt caagagaagt
      721 atgatgcaac aaaatcgtct aattggggca ttgtagggtg gttagctggt ggtggttcga
      781 ctccgatagt agacgttttt actcaagcaa gtagtgatat ggttgacttg catatctcta
      841 gtgtctttca agcccttcat tcagaagaaa attatcttcg cattcaggat gatactttaa
      901 ctggtgacat agcttcgatg gatttagcta ctccagaaaa cttacaaaat ctggtgaaag
      961 tgggtgagga attgttgaaa aaaacagtta ctaaagtgaa tttaggcaca ggcgtaacag
     1021 aaccttatta tcacactaca aatgagatgg ctttaaccaa gtttgcggga atacttcaca
     1081 gggagaaaaa tgtgcgagaa cttagatcgc caaatactaa taaaggagtg attgataaaa
     1141 caaaattgat tgcagaacaa actgcacatt ctcgaagaac accggcactc tctaatacaa
     1201 ttgatcactc tcaacaagat ctgccagagc ttgacacaaa gtaatcaagc tgtcttctat
     1261 cagtgaaggt tatttaataa tatgttataa tttctagcta tgagctttaa gcttcctgaa
     1321 tagttgcatg aattctaaat aggtatatgt aaggtctgag gttaagatgt acgagataca
     1381 aagataaatg tatgatggtt gactacttta aacaattgaa ataaaaacac taaatgatat
     1441 cccaaacgtt ggttgatgtt gtttgttatg gccatagccc atatatcgtt agttcatatc
//
LOCUS       XM_071830635             759 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL15x-like (LOC139840369), transcript variant X1, mRNA.
ACCESSION   XM_071830635
VERSION     XM_071830635.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..759
                     /gene="LOC139840369"
                     /note="large ribosomal subunit protein uL15x-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840369"
     CDS             146..586
                     /gene="LOC139840369"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL15x-like"
                     /protein_id="XP_071686736.1"
                     /db_xref="GeneID:139840369"
                     /translation="MTTRLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRIL
                     FDKYHPGYFGKVGMRYFHRLRNKFHCPIVNVDKLWSMVPQDVKEKASGDKVPVVDVTQ
                     FGYFKVLGKGAVPVSHPMVVKAKLISKTAEKKIKEAGGAVLLTA"
     misc_feature    146..583
                     /gene="LOC139840369"
                     /note="60S ribosomal protein L27a; Provisional; Region:
                     PTZ00160"
                     /db_xref="CDD:185489"
     polyA_site      759
                     /gene="LOC139840369"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caacgccttt tctttgtacg catcttatct tattcggagt atcttataaa aagaaattag
       61 ggttttaatt caatttcagt gagctagcaa actctatccc caatctccgc cgcactttcc
      121 cgccggagtt ctcattttag gaaaaatgac tacgagattg aggaagaacc gtaagaagcg
      181 gggtcacgta agtgcgggtc acggtcgtat tggaaaacac cgaaagcatc ctggaggacg
      241 tggtaatgct ggtggaatgc atcatcatcg tatcctattt gacaagtacc atcccggtta
      301 ctttggtaaa gtcggtatgc gatactttca ccgtctccgc aacaaattcc attgccctat
      361 tgttaatgtc gataagcttt ggtcaatggt cccacaagat gtgaaggaga aagcttctgg
      421 tgataaggtg ccggttgttg atgttactca gttcggttac tttaaagtgt tgggaaaagg
      481 agctgttcca gtttcacatc caatggttgt taaggcgaaa cttatttcaa aaactgcaga
      541 gaagaagatt aaggaggctg gcggtgctgt tttgcttact gcttagattt gttttgattt
      601 atattgttag attatggttt ttatggatga tgagttgcac tctgttttgt tgaaattaaa
      661 cttgatgagt tgttataatg ctcaatttgg cttgcacaat ctttcatatt gccagtccgt
      721 tcatttaatc ctgaaacaaa tatgatagtt tttatattc
//
LOCUS       XM_071830636             674 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL15x-like (LOC139840369), transcript variant X2, mRNA.
ACCESSION   XM_071830636
VERSION     XM_071830636.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..674
                     /gene="LOC139840369"
                     /note="large ribosomal subunit protein uL15x-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840369"
     CDS             61..501
                     /gene="LOC139840369"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL15x-like"
                     /protein_id="XP_071686737.1"
                     /db_xref="GeneID:139840369"
                     /translation="MTTRLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRIL
                     FDKYHPGYFGKVGMRYFHRLRNKFHCPIVNVDKLWSMVPQDVKEKASGDKVPVVDVTQ
                     FGYFKVLGKGAVPVSHPMVVKAKLISKTAEKKIKEAGGAVLLTA"
     misc_feature    61..498
                     /gene="LOC139840369"
                     /note="60S ribosomal protein L27a; Provisional; Region:
                     PTZ00160"
                     /db_xref="CDD:185489"
     polyA_site      674
                     /gene="LOC139840369"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctgaatcca aaatagttat agtatcatat tatgtttgct agtactctgt tacaggaaaa
       61 atgactacga gattgaggaa gaaccgtaag aagcggggtc acgtaagtgc gggtcacggt
      121 cgtattggaa aacaccgaaa gcatcctgga ggacgtggta atgctggtgg aatgcatcat
      181 catcgtatcc tatttgacaa gtaccatccc ggttactttg gtaaagtcgg tatgcgatac
      241 tttcaccgtc tccgcaacaa attccattgc cctattgtta atgtcgataa gctttggtca
      301 atggtcccac aagatgtgaa ggagaaagct tctggtgata aggtgccggt tgttgatgtt
      361 actcagttcg gttactttaa agtgttggga aaaggagctg ttccagtttc acatccaatg
      421 gttgttaagg cgaaacttat ttcaaaaact gcagagaaga agattaagga ggctggcggt
      481 gctgttttgc ttactgctta gatttgtttt gatttatatt gttagattat ggtttttatg
      541 gatgatgagt tgcactctgt tttgttgaaa ttaaacttga tgagttgtta taatgctcaa
      601 tttggcttgc acaatctttc atattgccag tccgttcatt taatcctgaa acaaatatga
      661 tagtttttat attc
//
LOCUS       XM_071830637            1913 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein SKIP19-like
            (LOC139840370), mRNA.
ACCESSION   XM_071830637
VERSION     XM_071830637.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1913
                     /gene="LOC139840370"
                     /note="F-box protein SKIP19-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840370"
     CDS             23..1366
                     /gene="LOC139840370"
                     /codon_start=1
                     /product="F-box protein SKIP19-like"
                     /protein_id="XP_071686738.1"
                     /db_xref="GeneID:139840370"
                     /translation="MMNKNKSCSWDDEDEKELRETIRFGKLIGLQFEPAHKHNLRESM
                     KADKAKVTKASTSKSNRRKEKHLGFQFEPAHEHNLRETMKADQANKGTKASTSKSKPR
                     KGKKSKFVPKPKQIWQVKKPTANWLELPTDLTANILQRIGVFDILNNAEKVCTTWRKI
                     CKDPAMWKVISMDNPECTNGRPVCQEICKHLVDRSQGQLVDLSITDFCTDELLRYISD
                     RASQLKRLEVKYCFGEMYGEWGVYFKKFPLLEELSIERTDIGPDDIKAAGQYCPMLKT
                     LRVNQTFYGILDKDDDCVNNTAIAIAKNLPNLRHLQLIGDSMTNIGLQAIMDGCTHLE
                     SLDIRQCLYIDLKKDDIGKKCSERIKNLKLPNDDMEGHMHLVKNDNDYEPYDVSSDSG
                     LFFDDSDDYYGGYYDSDGYEYDDLTRFDAFDEDGNMNDFEDLNDLMNFFAEIKYK"
     misc_feature    395..532
                     /gene="LOC139840370"
                     /note="F-box domain found in Arabidopsis thaliana
                     SKP1-interacting partner 19 (AtSKIP19) and similar
                     proteins; Region: F-box_AtSKIP19-like; cd22164"
                     /db_xref="CDD:438935"
     misc_feature    order(407..409,419..421,428..433,440..445,455..457,
                     461..466,479..487,491..493)
                     /gene="LOC139840370"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438935"
     misc_feature    593..688
                     /gene="LOC139840370"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    689..841
                     /gene="LOC139840370"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    <752..>1054
                     /gene="LOC139840370"
                     /note="Antagonist of mitotic exit network protein 1;
                     Region: AMN1; cd09293"
                     /db_xref="CDD:187754"
     misc_feature    842..943
                     /gene="LOC139840370"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    944..1018
                     /gene="LOC139840370"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 gtgagtatat tttggggacg aaatgatgaa caaaaataaa agttgcagtt gggatgatga
       61 agatgaaaaa gaactccgtg aaacgattag gtttggaaaa cttatcggcc tccaattcga
      121 gccggctcac aaacataatc tcagagaatc aatgaaagct gacaaagcta aagtcacaaa
      181 ggcatcaacg tcaaaatcaa atcgacgtaa agaaaaacat cttggcttcc aatttgagcc
      241 agctcacgaa cataatctca gagaaacgat gaaagctgac caagctaata aggggacaaa
      301 ggcgtcaaca tcaaaatcga agccacgaaa aggaaagaaa tccaagtttg ttccaaaacc
      361 caaacagatt tggcaggtga agaaaccaac tgcaaattgg ttagagctcc caacagattt
      421 aaccgccaat atacttcaac gaattggtgt gtttgatata cttaataatg ctgaaaaagt
      481 ttgtacaacc tggcgaaaaa tatgtaagga ccctgctatg tggaaggtta tttcgatgga
      541 caaccctgaa tgtacgaatg gtcggccagt atgtcaagag atatgtaagc atcttgttga
      601 tagaagccaa ggccaattgg ttgatctttc catcaccgat ttttgcactg atgagcttct
      661 tcgatatatc tccgataggg caagtcagct taaacgtctt gaagtcaaat attgttttgg
      721 tgaaatgtac ggagagtggg gtgtttattt taagaaattt ccattattgg aggaactcag
      781 tattgagaga acagatattg ggcccgatga tataaaagct gctggacaat attgccccat
      841 gctaaaaaca ctcagagtga atcaaacgtt ctatggaata ttagataaag atgatgattg
      901 tgtgaacaat acggccatag ctattgctaa aaatttacct aatttaaggc accttcaact
      961 tattggagac agcatgacaa atattgggtt gcaggcgatt atggatggtt gtactcatct
     1021 tgagtccctt gacattcgtc agtgcttgta tattgatcta aaaaaagatg acattgggaa
     1081 aaaatgttca gaacggatta aaaatcttaa acttcctaat gatgatatgg aagggcatat
     1141 gcatcttgtt aagaatgata acgattacga gccatatgat gtttcttctg attccgggtt
     1201 attttttgat gattctgatg attattatgg tggatattat gactccgatg gttacgagta
     1261 tgatgatctt actcgatttg atgcgtttga tgaagatggc aatatgaatg actttgagga
     1321 tttgaatgac ttgatgaatt tcttcgctga gattaaatat aaatagtctt attctttgct
     1381 gtaaaaggtt cagttgctgt ctttctatat ggctttggtg ggcctggtaa tgtgagtatt
     1441 cattctgctg atgtttttgt tgggtcatga ggttgtcatt tcggttacaa aattagtttg
     1501 tgtaaccact aaagatggta ccttggcatt tatcttttgt tcttggattt gaaatgcatt
     1561 tcttttaaga ttatgaaaac tttaacttag gtctgttaga actttataac atatttgcat
     1621 ggctgtgaaa gttgttcggc tagtcttcga tatgccgaga ctcgggattt ttaagtagtt
     1681 tgttccgact cgtctaagcc ggccaaaagt cgctatttaa cgggtcaaag ttgaccaaaa
     1741 ataagattta gtcggtgcaa aattaaatcc ttcaagattg gtgtaaaata agttagctcg
     1801 acagctccct acttgatcga ctagtccttg gcttgtgact ttttatacta tttttttcca
     1861 aaagtaagat acagttgtga gactcgaaaa ttggccttct gcaggttaaa gtg
//
LOCUS       XM_071830639            1503 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-galactose/UDP-glucose
            transporter 5-like (LOC139840371), mRNA.
ACCESSION   XM_071830639
VERSION     XM_071830639.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1503
                     /gene="LOC139840371"
                     /note="UDP-galactose/UDP-glucose transporter 5-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139840371"
     CDS             260..1309
                     /gene="LOC139840371"
                     /codon_start=1
                     /product="UDP-galactose/UDP-glucose transporter 5-like"
                     /protein_id="XP_071686740.1"
                     /db_xref="GeneID:139840371"
                     /translation="MADPSSVDAKENKFLKGSFAVVGIMSTLVIYGVLQEKIMRVPYG
                     LNHEFFRHSLFLVFCNRITTSAVSFVFLLTSKKSLDPVAPIYKYGVVSISNILTTTCQ
                     YEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKKYKGPDYFLAVLVTIGCSLFILFPG
                     ASELSPNRKERESTVWGVSLMIGYLGFDGFTSTFQDKLFKGYDMGIYNQIFYTTLCSC
                     ILSLTGLMLQGNLLMAIDFVSRHKDCFFDIALLSTVATASQFFISYTIRTFGALTFAT
                     IMTTRQLVSILLSCVWFGHPLSVEQFIGAVIVFGSLYARSFIKSKAEKPLPPIHKLDE
                     EASVPFKVIEQRGFH"
     misc_feature    314..1216
                     /gene="LOC139840371"
                     /note="UAA transporter family; Region: UAA; pfam08449"
                     /db_xref="CDD:462479"
ORIGIN      
        1 taaaaaattt taaatcgccg gtgaaaacaa tgagaaatag tcgccggtga aaccgcccat
       61 cgatcatcat tagccccaaa acccttacgc cacgttttct atataaaaat ctcattttta
      121 tttctgggtt tttacttatt agtcatcttt ttagggttta tcaaataccc atttcatttc
      181 taccttcaat ttcatcataa actcagatac ataaatatat acatactgca gctgttgcat
      241 cggcgccggc ggtggtggta tggctgatcc atcgtcagtt gatgctaagg aaaataagtt
      301 tttaaagggt agttttgctg ttgttggaat tatgtctact cttgttattt atggtgtgct
      361 acaggagaag attatgagag ttccttatgg tctaaaccac gaattcttca gacattcgtt
      421 atttcttgtt ttctgtaacc gcattaccac gtctgcagta tcttttgttt tcttattgac
      481 aagtaaaaag tcgttggatc ctgttgctcc catttacaag tacggtgttg tatcaatatc
      541 taatatacta actacaacat gtcaatacga ggctcttaaa tatgttagct ttcctgttca
      601 gactctagcc aagtgtgcca aaatgatacc cgtaatgatt tggggaactt taatcatgca
      661 aaagaaatac aaagggccag attatttttt ggccgtgctt gttactattg gctgctcgtt
      721 atttatccta tttccgggag cgagtgagtt aagcccaaac cgcaaagaaa gagaaagtac
      781 ggtgtggggt gtctctttga tgattggtta tctagggttt gatggtttta ctagcacatt
      841 tcaagataaa ttatttaaag gatatgatat gggaatttac aaccagattt tctacactac
      901 actctgttct tgcatactta gcttgactgg tcttatgttg cagggcaatc ttcttatggc
      961 aatagatttc gtttctcgcc acaaggattg tttctttgac attgcattgc tttcaactgt
     1021 tgcaacagcc agtcaattct tcatatctta cacaattcgc acgttcggag ctcttacatt
     1081 tgctactata atgacaacta gacaattagt gagcattttg ctgtcgtgcg tttggtttgg
     1141 tcaccccctt agcgtggaac aattcattgg agcagtgatt gtgtttgggt ctctttatgc
     1201 aagaagtttc attaaaagca aagctgagaa acctttaccc ccaatacaca agttagatga
     1261 agaagcatct gtccctttta aggtgatcga acaaagaggt tttcattagg atttcataaa
     1321 aggttatttt ctgtttttgc tctttgtttt cttacatttt tattttattt aaggtctaat
     1381 cctctatcta catgtgtttt aacgagatgg agaaaatttt cagcatattt tcctacttga
     1441 caactcatct acaatcactt tatctgagaa tcaactttgt aaactattaa tttacttgat
     1501 tat
//
LOCUS       XM_071830640            1837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DEAD-box ATP-dependent RNA
            helicase 1 (LOC139840372), mRNA.
ACCESSION   XM_071830640
VERSION     XM_071830640.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1837
                     /gene="LOC139840372"
                     /note="DEAD-box ATP-dependent RNA helicase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139840372"
     CDS             72..1625
                     /gene="LOC139840372"
                     /codon_start=1
                     /product="DEAD-box ATP-dependent RNA helicase 1"
                     /protein_id="XP_071686741.1"
                     /db_xref="GeneID:139840372"
                     /translation="MKEEEEEEAKQHKTARKKVAVLPWMRSPVDISTLNKCPLSHLPF
                     LNPRLEEALCSSGINSLFPVQVAVWQETIGPGSFERDICVNSPTGSGKTLAYALPIVQ
                     TLSTRAVKCLRALVVLPTRDLALQVRDVFETIAPAVGLKVGLAVGQSSIADEISMLIE
                     RPKVEAGVIYDPEHRSVELQSAVDILVGTPGRLMDHINHTKGFTLEHLRFLVVDETDR
                     LLRESYQSWLPTVLQYTSSSINGPFSSIINSSSSTFGSLKTIRRVGVERGFNNKPHPR
                     LVKMVLSATLTQDPSKLAQLDLHHPLFLTTGKIRYQLPEHLASFKLICEPKLKPLYLV
                     ALLQSLQGEKSIVFTSSVESTHRLCSLLKYFGDLGIKIKEYSGHQHQTVRSKTLRAFR
                     EGGVQVLVSSDAMTRGMDVEGVKNVINYDKPPYIKTYIHRVGRTARAGNTGSCFTLLH
                     EDEVKQFKKLLKKADIDSCPVRTVSLDSIESLRSTYDTALEKLKENVEMETQKKRKIG
                     YKSSSKMKR"
     misc_feature    216..986
                     /gene="LOC139840372"
                     /note="DEAD-box helicase domain of DEAD box protein 51;
                     Region: DEADc_DDX51; cd17956"
                     /db_xref="CDD:350714"
     misc_feature    order(240..245,249..257,264..266,330..353)
                     /gene="LOC139840372"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350714"
     misc_feature    1035..1418
                     /gene="LOC139840372"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; Region: SF2_C_DEAD; cd18787"
                     /db_xref="CDD:350174"
     misc_feature    order(1293..1295,1299..1301,1374..1376,1383..1388)
                     /gene="LOC139840372"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350174"
ORIGIN      
        1 ttcaccttcc ttaaacctgc aaaatcaaaa actaaccaca agttcataac caccttcttc
       61 tcactttaat catgaaagaa gaagaagaag aagaagcaaa acaacataaa actgccagaa
      121 aaaaagtcgc agtattacca tggatgcgaa gtccagtcga tatcagcact cttaacaaat
      181 gtcccctttc tcacctcccc tttcttaacc ctaggttgga agaggctttg tgcagtagtg
      241 gaattaattc attatttcct gttcaagtag cagtttggca agaaacaata ggacctggct
      301 cattcgaaag agatatttgt gtgaattcac ctactggtag tggtaaaacc ctagcttatg
      361 cattacctat cgtacaaacg ctttccactc gagccgttaa atgtcttcgt gctttagtcg
      421 ttttgcctac tcgtgatctc gccttgcagg ttagggatgt ttttgagact attgcccctg
      481 cagtggggtt gaaagttggc ttggctgttg gtcaatcttc aatagcggat gaaatttcga
      541 tgcttattga gagaccgaaa gtggaggcag gtgttattta tgaccctgaa catcggtctg
      601 ttgagttgca aagcgctgta gatatattag tggggacacc tggaaggctg atggatcata
      661 ttaaccacac gaagggtttt acacttgaac atcttcgttt tttggtagtt gatgagactg
      721 atcgattgct cagggaatca tatcaatcat ggcttcctac agtgcttcag tataccagtt
      781 ctagcattaa tggccccttt tcttccatca tcaattcatc ttcttcaaca tttggctcct
      841 tgaagactat aagaagagtt ggtgtagaga ggggttttaa taataaacca cacccgaggc
      901 tcgtaaagat ggttttatct gctacattaa cacaagatcc aagcaaactt gctcaacttg
      961 atctgcacca tccattgttc ttgacaactg ggaagatacg atatcagctt ccagaacatc
     1021 ttgcttcctt caaattgata tgtgaaccga agctgaagcc tttgtacctg gttgccctat
     1081 tacaaagttt gcaaggggag aaaagcattg tttttacatc gtcagttgag tcgacacata
     1141 gactatgctc tttacttaaa tattttggag atttgggtat caagatcaag gaatattctg
     1201 gtcatcaaca ccaaactgtg agaagcaaaa ctttaagagc attccgagag ggtggggtcc
     1261 aagttctcgt ttcttctgat gcaatgacac gtggaatgga tgtagaaggg gttaaaaacg
     1321 taattaacta tgataaacct ccatacatca agacatatat tcatcgtgtt ggtcgtactg
     1381 caagagcagg caatactggc tcctgcttca ccttattaca tgaagacgag gtcaaacaat
     1441 tcaagaagct tctgaagaaa gctgacattg attcatgtcc tgttcgtaca gtttcattgg
     1501 attcaataga gtcccttcgg tcgacttacg atactgcttt agagaaacta aaagagaacg
     1561 ttgaaatgga aacacagaag aagcgaaaga ttggttacaa gtcgtcaagc aagatgaagc
     1621 gctgaattat gctctaaaga aaattgctgt tgtataattc ttttaccaaa gcatcatcag
     1681 ctattttact ccttcagttt tgtagttata gagacccact tgatcaattt tgggttgttg
     1741 cttactttat catttgcagg tgatttttat ctcattatta agcttaattg ctcagaacaa
     1801 ttatgttttt gtactttttg tcattacaaa ttcatct
//
LOCUS       XM_071830641            1361 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides hydroxyproline
            O-galactosyltransferase HPGT1-like (LOC139840373), mRNA.
ACCESSION   XM_071830641
VERSION     XM_071830641.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1361
                     /gene="LOC139840373"
                     /note="hydroxyproline O-galactosyltransferase HPGT1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 13 Proteins"
                     /db_xref="GeneID:139840373"
     CDS             167..1195
                     /gene="LOC139840373"
                     /codon_start=1
                     /product="hydroxyproline O-galactosyltransferase
                     HPGT1-like"
                     /protein_id="XP_071686742.1"
                     /db_xref="GeneID:139840373"
                     /translation="MLRSRGSNNRLSSRSAFQWRISSLILSMIATMAAFFVAYRLWQE
                     AESRVYLAKELDRRTGQGESAISVDDTLKVIECREQQKKLSMLQMELAKAKKEGFASN
                     YHTETKDEKKKPLAVVGILTGFGRRHNRDAIRKAWMPTGTTLKKLEDEKGIIIRFVIG
                     KSADRGDSSNSDIFNENEKTKDFLILNDHVEAPEEQPKKTKLFFIDALKHWDAEFYVK
                     VNDDIYLNIDALGSILSNHVNNPRAYIGCMKSGGVFSKPTDRWYEPEWWKFGDKKSYF
                     RHASGEIFAVSRALAQFISINKSILRTYAHDDVSVGSWFIGLDVNHVDEGKFCCTSWS
                     SGAICAAS"
     misc_feature    224..451
                     /gene="LOC139840373"
                     /note="Domain of unknown function (DUF4094); Region:
                     DUF4094; pfam13334"
                     /db_xref="CDD:463847"
     misc_feature    <410..1192
                     /gene="LOC139840373"
                     /note="beta-1,3-galactosyltransferase; Provisional;
                     Region: PLN03193"
                     /db_xref="CDD:178735"
ORIGIN      
        1 tttgttgttc ctccatcact tcactctctc acaccaaacc aactgccttt tttccatttc
       61 accttccgta tcaacacaca aactcacacc gatcgataca tcagttcaat tgattccgtc
      121 aacgaacgag tataattgga tactaaacgc cgtcgtttcc gaagaaatgc tgcgtagccg
      181 gggatccaac aaccggctat cttctcgttc tgcttttcaa tggcgaattt catctcttat
      241 tctttcaatg attgctacca tggctgcatt tttcgttgcg tatagattgt ggcaggaggc
      301 agagtctagg gtttatttag ctaaagagct tgataggaga accggtcagg gagagtctgc
      361 aatatctgtt gatgacacac taaaagtcat agaatgcagg gaacaacaaa agaagttgtc
      421 tatgcttcaa atggagctag cgaaagctaa gaaagaggga tttgcttcaa attatcacac
      481 agaaacgaaa gatgaaaaga agaagccttt agcagttgta ggaattctta ctggatttgg
      541 ccgcagacac aatagagacg caatccgtaa ggcttggatg cctactggaa caactctaaa
      601 aaagctcgaa gatgagaagg ggataatcat acgatttgtt ataggcaaaa gcgcagatcg
      661 tggagacagt tcaaacagtg acatctttaa tgagaacgaa aaaacgaagg acttccttat
      721 tcttaatgat catgtggagg cacctgaaga gcaaccaaaa aaaaccaagt tgttctttat
      781 tgacgcgcta aaacactggg atgcagagtt ctatgtgaag gtcaatgatg acatttatct
      841 gaatattgat gcccttggtt ctattctttc aaaccatgtg aataaccctc gtgcttatat
      901 cgggtgtatg aaatctggtg gcgttttctc aaaaccgact gacagatggt acgaaccaga
      961 gtggtggaaa tttggggata aaaaatcata tttccgacat gcttctgggg aaatatttgc
     1021 tgtatctcga gcattggctc agtttatctc aattaacaaa tcgatacttc gtacatatgc
     1081 tcatgatgat gtcagcgttg gctcatggtt cattggcctt gatgtgaatc atgtggatga
     1141 agggaaattt tgttgcacgt cttggtcttc aggggccata tgtgcagctt cttgaggagt
     1201 ttcagctaca cttgttgagt cctatagtat aacttatcct tcattaacag tttaacacat
     1261 acatatttta tgtgagtttg tagtattacg gatgagatta tgagaaacta aactcgtttg
     1321 tatagttgag cagattttgt atttgatcaa atcatatcat a
//
LOCUS       XR_011757390            1252 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840374), transcript variant X1, ncRNA.
ACCESSION   XR_011757390
VERSION     XR_011757390.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1252
                     /gene="LOC139840374"
                     /note="uncharacterized LOC139840374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840374"
     ncRNA           1..1252
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840374"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139840374"
ORIGIN      
        1 aacctctcct atctctctct aaaaggttaa acactccaaa attcttttca cggtcgacac
       61 tgccttcatg ccgccatatt agccgacgac actaccacca gcgaatccgt cacgatttac
      121 cctacaaaac cgtgtaaatt ttgtgtatta acggcagctt tttcgaaagc gccggaaaca
      181 tctccggtga ccggaaagtc gacgaagaag acgacgtcag tttcgacagc gatcggtttt
      241 ttttttattc tgggaaccga tagatgttga tcgggatttg attgtgctgg tggcgagatg
      301 tgcattacct ggtggttcac gagttcctca acaactgttt aatgtaatgc cttagtaagt
      361 ttttagtttt gtcaacataa aatgtcagtt gaatcgttgg ttattactta ttacttccat
      421 taattagttt ttttgcatac taattgtgct tatttactaa aaggcaaaat cacacttcat
      481 tagtacgtac aagtgtttct gtgcggtgga cattgacggg tggtagttat cagattgaat
      541 gccctatttt ggttagagtt ttgatgtgct gaggtaggct tcatactctg aaaatggtga
      601 agttattggg aagttgtttg tagttagcac tttgaagcga tcgtcactga tcacttcatc
      661 aaaatgtttg tttgtctttg gatggaaaat gggcagcgaa tctaagtgag aaaaaggata
      721 ttaaatgatc gatcaatgat aataacaagc atcaatatca tacgtggttc acggtttgtt
      781 tcggcatatc aaaggtgtaa ctgaatatga tcaagcctta ggcgattgtg acagaggtac
      841 cagctacagt tctgcagcgt ttgactgttt tatctgagca tgtcgctggt tcgtgcgctc
      901 ccggatagtt tgtgtgctcc tggatagttc gtgtgctcct ggacgatcaa cctttgatgt
      961 taatccaatt acaaatgttc atgctaatgt ggatactaca tgaagtggta atagtcttat
     1021 gtagcacatt ttttgtaaca cttttgatat cataaacagc aaccaaatct tttgctatgt
     1081 aaaatagtag aactcatatg atattgtatc actcattatc tttgttatgt aacaccagta
     1141 gaccagtagt agcatccctt ggtaacacca gcaatagcct cctttgtaac accagcagta
     1201 gcagcaacca caccgaaacc attaaaatat ctcgaataga aaacacgttg ta
//
LOCUS       XR_011757391            1143 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840374), transcript variant X2, ncRNA.
ACCESSION   XR_011757391
VERSION     XR_011757391.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1143
                     /gene="LOC139840374"
                     /note="uncharacterized LOC139840374; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840374"
     ncRNA           1..1143
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840374"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139840374"
ORIGIN      
        1 aacctctcct atctctctct aaaaggttaa acactccaaa attcttttca cggtcgacac
       61 tgccttcatg ccgccatatt agccgacgac actaccacca gcgaatccgt cacgatttac
      121 cctacaaaac cgtgtaaatt ttgtgtatta acggcagctt tttcgaaagc gccggaaaca
      181 tctccggtga ccggaaagtc gacgaagaag acgacgtcag tttcgacagc gatcggtttt
      241 ttttttattc tgggaaccga tagatgttga tcgggatttg attgtgctgg tggcgagatg
      301 tgcattacct ggtggttcac gagttcctca acaactgttt aatgtaatgc cttagcaaaa
      361 tcacacttca ttagtacgta caagtgtttc tgtgcggtgg acattgacgg gtggtagtta
      421 tcagattgaa tgccctattt tggttagagt tttgatgtgc tgaggtaggc ttcatactct
      481 gaaaatggtg aagttattgg gaagttgttt gtagttagca ctttgaagcg atcgtcactg
      541 atcacttcat caaaatgttt gtttgtcttt ggatggaaaa tgggcagcga atctaagtga
      601 gaaaaaggat attaaatgat cgatcaatga taataacaag catcaatatc atacgtggtt
      661 cacggtttgt ttcggcatat caaaggtgta actgaatatg atcaagcctt aggcgattgt
      721 gacagaggta ccagctacag ttctgcagcg tttgactgtt ttatctgagc atgtcgctgg
      781 ttcgtgcgct cccggatagt ttgtgtgctc ctggatagtt cgtgtgctcc tggacgatca
      841 acctttgatg ttaatccaat tacaaatgtt catgctaatg tggatactac atgaagtggt
      901 aatagtctta tgtagcacat tttttgtaac acttttgata tcataaacag caaccaaatc
      961 ttttgctatg taaaatagta gaactcatat gatattgtat cactcattat ctttgttatg
     1021 taacaccagt agaccagtag tagcatccct tggtaacacc agcaatagcc tcctttgtaa
     1081 caccagcagt agcagcaacc acaccgaaac cattaaaata tctcgaatag aaaacacgtt
     1141 gta
//
LOCUS       XM_071830642             902 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ras-related protein RABE1c
            (LOC139840375), mRNA.
ACCESSION   XM_071830642
VERSION     XM_071830642.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..902
                     /gene="LOC139840375"
                     /note="ras-related protein RABE1c; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 54
                     Proteins"
                     /db_xref="GeneID:139840375"
     CDS             62..712
                     /gene="LOC139840375"
                     /codon_start=1
                     /product="ras-related protein RABE1c"
                     /protein_id="XP_071686743.1"
                     /db_xref="GeneID:139840375"
                     /translation="MAAPPVRARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSF
                     ITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESS
                     FNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSA
                     KTNLNVEQVFFSIAKDIKQRLSDTDSKAEPTTIKINQADAGAGSGQAAQKSACCGS"
     misc_feature    98..601
                     /gene="LOC139840375"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     Region: Rab8_Rab10_Rab13_like; cd01867"
                     /db_xref="CDD:206659"
     misc_feature    98..112
                     /gene="LOC139840375"
                     /note="Rab subfamily motif 1 (RabSF1); other site"
                     /db_xref="CDD:206659"
     misc_feature    125..148
                     /gene="LOC139840375"
                     /note="G1 box; other site"
                     /db_xref="CDD:206659"
     misc_feature    order(131..151,179..190,197..202,278..280,443..448,
                     452..457,539..544)
                     /gene="LOC139840375"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206659"
     misc_feature    order(149..187,191..199)
                     /gene="LOC139840375"
                     /note="Rab subfamily motif 2 (RabSF2); other site"
                     /db_xref="CDD:206659"
     misc_feature    order(179..181,194..220)
                     /gene="LOC139840375"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206659"
     misc_feature    order(188..190,194..196,206..229,248..250,254..256)
                     /gene="LOC139840375"
                     /note="GEF interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:206659"
     misc_feature    200..202
                     /gene="LOC139840375"
                     /note="G2 box; other site"
                     /db_xref="CDD:206659"
     misc_feature    order(203..205,209..217,260..262,266..268,287..292,
                     299..301,311..313,317..328,590..592)
                     /gene="LOC139840375"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     misc_feature    order(203..208,212..214,266..271,290..292,296..298,
                     302..310)
                     /gene="LOC139840375"
                     /note="putative GDI interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206659"
     misc_feature    203..217
                     /gene="LOC139840375"
                     /note="Rab family motif 1 (RabF1); other site"
                     /db_xref="CDD:206659"
     misc_feature    254..268
                     /gene="LOC139840375"
                     /note="Rab family motif 2 (RabF2); other site"
                     /db_xref="CDD:206659"
     misc_feature    269..280
                     /gene="LOC139840375"
                     /note="G3 box; other site"
                     /db_xref="CDD:206659"
     misc_feature    order(278..280,284..316)
                     /gene="LOC139840375"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206659"
     misc_feature    287..304
                     /gene="LOC139840375"
                     /note="Rab family motif 3 (RabF3); other site"
                     /db_xref="CDD:206659"
     misc_feature    311..325
                     /gene="LOC139840375"
                     /note="Rab family motif 4 (RabF4); other site"
                     /db_xref="CDD:206659"
     misc_feature    338..355
                     /gene="LOC139840375"
                     /note="Rab family motif 5 (RabF5); other site"
                     /db_xref="CDD:206659"
     misc_feature    407..436
                     /gene="LOC139840375"
                     /note="Rab subfamily motif 3 (RabSF3); other site"
                     /db_xref="CDD:206659"
     misc_feature    443..454
                     /gene="LOC139840375"
                     /note="G4 box; other site"
                     /db_xref="CDD:206659"
     misc_feature    536..544
                     /gene="LOC139840375"
                     /note="G5 box; other site"
                     /db_xref="CDD:206659"
     misc_feature    584..601
                     /gene="LOC139840375"
                     /note="Rab subfamily motif 4 (RabSF4); other site"
                     /db_xref="CDD:206659"
     polyA_site      902
                     /gene="LOC139840375"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtatatatat ttatatatat atatataagc tcctttttag agctttttat tcgacaattt
       61 aatggctgct ccaccggtta gggcacgtgc agattatgat tacctgatta agctcctttt
      121 gataggcgat agcggtgtgg ggaagagttg ccttcttttg cgtttctctg atggttcttt
      181 caccactagt tttattacta ccattggtat tgatttcaag ataaggacca tagagcttga
      241 tggcaaacgg atcaaacttc aaatttggga cacagctggt caggagcggt tcaggacaat
      301 tacaactgct tactacagag gagctatggg cattctgttg gtatacgatg ttacagatga
      361 gtcatctttt aacaacataa gaaactggat tcgcaacatt gaacaacatg cctcagacaa
      421 tgttaacaag attttggttg gaaacaaggc tgatatggat gaaagcaaga gggctgttcc
      481 taccgctaag ggccaagcac ttgctgatga gtatggcatt aagttctttg aaactagtgc
      541 taaaacaaat ttaaatgtgg agcaagtttt cttttcaatt gcaaaggata tcaagcaaag
      601 gctttcagac accgattcaa aggccgagcc aacgacgatc aagatcaatc aagcagacgc
      661 gggagctggg agtggtcaag ctgcacagaa atctgcttgc tgcggttctt aaaactaact
      721 ttgacgacaa catgatatcg ggggtcggtg tttgtaattt tcaatttatc tgctgctgtt
      781 attcttttaa aacttttatt atgttagtgt gtgaaacaaa tcatagggtc aagtactgga
      841 tttctacctg caggataata tttgtttttt attttcttca caaccttatt gttttaatgt
      901 ta
//
LOCUS       XM_071830643            1708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-ketoacyl-CoA synthase
            12-like (LOC139840376), mRNA.
ACCESSION   XM_071830643
VERSION     XM_071830643.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1708
                     /gene="LOC139840376"
                     /note="3-ketoacyl-CoA synthase 12-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins"
                     /db_xref="GeneID:139840376"
     CDS             58..1455
                     /gene="LOC139840376"
                     /codon_start=1
                     /product="3-ketoacyl-CoA synthase 12-like"
                     /protein_id="XP_071686744.1"
                     /db_xref="GeneID:139840376"
                     /translation="MMFYLTISSFFPLLCIFYILYNFLETKRHKKCYLLDYQLYKPSD
                     DRKLSTEFCGEVIKRTKNLGLNEYKFLLKAIVSSGIGEETYAPQMVFEGREDCPTYQD
                     AIIEMEELFEYTIERLLKRTGVSPLEIDVLVVNISMLACMPSLSSRIVHKYKMREDIK
                     TYNLSGMGCSASFVSINIVESIFKSRKNQLAMVVTSESLTPNWYIGNDKSMILSNCLF
                     RSGGCAMILTNKPSLAHKCMLKLNCLVRTHHGAKDESYGCCIQTEDAQGRVGFHLGKT
                     LPKAATRAFIDNLKELAPKILPIRELLRFGIHSVTLKILNHGKKKSTVSPRAVINFKT
                     GVDHFCLHTGGKAVIDTVAQSLGLSEYDIEPARMTLHRFGNTSASSVWYVLGYMESKK
                     RLRKGDKLFMISFGAGFKCNSCLWEVVRDLEGIENVWKECNIESYPPQTLTNPFTEKY
                     GWIKDEDINTFKLPE"
     misc_feature    133..996
                     /gene="LOC139840376"
                     /note="FAE1/Type III polyketide synthase-like protein;
                     Region: FAE1_CUT1_RppA; pfam08392"
                     /db_xref="CDD:429970"
     misc_feature    order(232..234,241..246,709..711,916..918,1090..1098)
                     /gene="LOC139840376"
                     /note="malonyl-CoA binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238427"
     misc_feature    order(340..345,352..354,478..483,496..498,508..510,
                     526..546,556..561,586..591,598..600,607..615,796..798,
                     802..810,868..879,1285..1287)
                     /gene="LOC139840376"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:238427"
     misc_feature    order(562..564,1081..1083,1180..1182)
                     /gene="LOC139840376"
                     /note="active site"
                     /db_xref="CDD:238427"
     misc_feature    order(646..654,712..714,862..870,913..918,1186..1188,
                     1276..1278)
                     /gene="LOC139840376"
                     /note="product binding site [active]"
                     /db_xref="CDD:238427"
     misc_feature    1063..1308
                     /gene="LOC139840376"
                     /note="Beta-ketoacyl synthase, C-terminal domain; Region:
                     Ketoacyl-synt_C; cl21486"
                     /db_xref="CDD:451266"
     polyA_site      1708
                     /gene="LOC139840376"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cataataact tccatgttct aaaccttcaa tatattctaa ctctctccct aaacaaaatg
       61 atgttctatc tcactatatc gtctttcttc ccactattat gcattttcta cattctatat
      121 aactttcttg aaacaaaaag gcataaaaaa tgttacttat tagattacca attgtacaaa
      181 ccctcggatg accgaaaact atcaaccgaa ttttgtggcg aagtcataaa gagaacaaag
      241 aatctcggtc taaacgagta caagtttctt ctcaaagcta ttgtgagctc cggcattggc
      301 gaagaaacct acgctccgca aatggtgttt gaaggccgcg aagattgccc tacttaccaa
      361 gatgcaatta tagaaatgga agagcttttc gagtacacaa tcgaaagatt attaaagcgg
      421 accggtgttt ctccattgga gattgatgtt ttggtggtta atatatcaat gttggcttgc
      481 atgccttcat tatcgagtcg aattgtgcac aagtacaaga tgagggaaga tatcaaaact
      541 tataatttga gtgggatggg gtgtagtgcg agttttgttt cgattaatat tgttgaaagt
      601 atattcaaat ctaggaaaaa tcaattggct atggtggtca catctgaatc attgactcca
      661 aattggtata ttggtaatga taaatctatg atactttcaa attgtttgtt tagatctgga
      721 gggtgtgcaa tgattcttac aaacaagcca agtttagctc acaaatgcat gttaaagttg
      781 aattgcctag ttcgaaccca tcatggtgca aaagatgagt cttatggatg ttgcatacaa
      841 accgaagatg cacagggtcg ggtagggttt catctaggta aaactctacc caaagccgct
      901 acgcgagctt tcatcgacaa tttgaaagag cttgctccca aaatattacc aatccgggag
      961 cttttacggt ttgggatcca ttcagtgacc ctaaaaattc tcaaccatgg taaaaaaaag
     1021 tcaacggtgt cacctagagc cgtgatcaat tttaagaccg gtgtggatca tttttgtctc
     1081 cacaccggtg gaaaagctgt cattgacaca gtcgctcaga gtcttggtct aagcgaatat
     1141 gacattgagc cggcacgaat gactttgcac cggttcggta acacttcagc tagtagtgtt
     1201 tggtatgttt tagggtacat ggagtcgaaa aaaagattaa gaaaaggtga caaattgttt
     1261 atgataagct ttggggcagg ttttaagtgt aatagttgtt tatgggaagt tgtacgtgat
     1321 ctggaaggaa tagaaaacgt gtggaaagaa tgtaatattg aaagttatcc accacaaacc
     1381 ctaaccaacc cattcacgga gaaatatggt tggatcaagg atgaagacat caacactttt
     1441 aagttaccag agtgaaaaat tttaattaca aggatataaa aaggtcatta cctttttgca
     1501 attcattgat tttattttaa acgtttatag aaatagaaaa agaaaaggtt tattaaattg
     1561 tgtgtaaatt taatctgttt gtactacgta tatgtattgt ttgatgtatc cgcactttca
     1621 ctcatagatc agtacctagg tataaatgta aatgtcaact atttcctgag tatatattta
     1681 tgtgtaatta aaatttacag tttttata
//
LOCUS       XM_071830644             942 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA-directed RNA polymerase
            II subunit RPB7-like (LOC139840377), mRNA.
ACCESSION   XM_071830644
VERSION     XM_071830644.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..942
                     /gene="LOC139840377"
                     /note="DNA-directed RNA polymerase II subunit RPB7-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139840377"
     CDS             79..612
                     /gene="LOC139840377"
                     /codon_start=1
                     /product="DNA-directed RNA polymerase II subunit
                     RPB7-like"
                     /protein_id="XP_071686745.1"
                     /db_xref="GeneID:139840377"
                     /translation="MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGF
                     VVAITGIENVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG
                     PVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIG
                     TIKDDFLGVISDPGTTS"
     misc_feature    79..594
                     /gene="LOC139840377"
                     /note="DNA-directed RNA polymerase II subunit 7;
                     Provisional; Region: PTZ00162"
                     /db_xref="CDD:240298"
     polyA_site      942
                     /gene="LOC139840377"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcatcgcta tcggtcatca acgatctagg ttacttcaaa attttccggt taaccgtcaa
       61 taggggttta gagagaggat gtttttccac attgtattgg agcgaaatat gcagctccat
      121 cctcgacatt tcgggcgcga tttacgtgaa aagctcgttt cgaagcttat gaaagacgta
      181 gaaggcactt gcagtggacg acatggtttt gttgtggcga taacgggtat agagaatgta
      241 gggaaagggt taattcgaga tggtacaggt ttcgttacgt ttccggttaa gtatcagtgt
      301 gttgttttcc ggccgtttaa aggggagatt ctggaagctg ttgtcaccat ggttaataag
      361 atgggtttct ttgctgaagc tggacctgtt caaatatttg tctcaaacca tttgatacct
      421 gatgacatgg agtttcagtc tggggatatg cctaattaca cgacttcaga tggatccgtg
      481 aagattcaaa aggatagtga ggtgaggttg aaaatcattg ggactcgagt tgatgccaca
      541 gaaattttct gcattggtac aatcaaagat gatttcttgg gcgtgattag tgatcccggc
      601 accacatctt aatgtgtagg acacctttga acaagaaatc aatcaaatca tgcccgacct
      661 tctattatga gaccttgttt taatgcttgc agtttgtata tgcaatagta atttaacgca
      721 gttatcttat ggctcaaaac caagtgttct cgtagtagaa gttgattctg attgtagttc
      781 ggaattttct tttggttcgt ctatagttgt ttattagtat cttttatgaa atctatcttt
      841 tgctgatggc aattttattg ctattattgg tgacgatgag attcatgacc gaaacttgca
      901 gtgtgttata tttgtggtaa tgaagtttga tgtatcatgg tc
//
LOCUS       XM_071830645            1687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides inner membrane protein
            PPF-1, chloroplastic-like (LOC139840379), mRNA.
ACCESSION   XM_071830645
VERSION     XM_071830645.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1687
                     /gene="LOC139840379"
                     /note="inner membrane protein PPF-1, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139840379"
     CDS             158..1519
                     /gene="LOC139840379"
                     /codon_start=1
                     /product="inner membrane protein PPF-1,
                     chloroplastic-like"
                     /protein_id="XP_071686746.1"
                     /db_xref="GeneID:139840379"
                     /translation="MAKSLISSPSSFTGTPFPSQFRTGRFSPRNNKLISTKVKFSFNG
                     LPPISSFDGASVDFAAIVSRAESLMYTLADAAVAVDSAASVSGDTTVTTTVQKSGGWF
                     GFISDAMEVVLKVLKDGLTAVHVPYAYGFAIILLTVLVKLVTLPLTKQQVESTLAMQN
                     LQPKLKAIQQRYAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV
                     ANEGLFTEGFFWIPSLGGPTTIAARQSGSGVSWLFPFVDGHPPLGWHDTAAYLVLPVL
                     LVLSQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS
                     TAQQVWLRKLGGAKPAVDENAGGIISAGRAKRSSSQPSESGSRFKQLKEEEKRKSTKA
                     VADQDVQVLASTSESEQDTDEETKSTEVLEEAYASSSTSKPVPVPVPVPGRSKRSKRK
                     RSV"
     misc_feature    542..1186
                     /gene="LOC139840379"
                     /note="60Kd inner membrane protein; Region: 60KD_IMP;
                     pfam02096"
                     /db_xref="CDD:460443"
ORIGIN      
        1 aaacccggat aacacaacac gcactatctc cccttcattt tcgcacaaac aaaaaaatgg
       61 gaaggtgatg gaattacaga gataaacaaa caaacaagta gatacataca tacaattaca
      121 ctatatctat atctatctat tatctatata acctaaaatg gcgaaatctc taatttcatc
      181 accttcttca ttcaccggaa caccgtttcc gtcacaattt cgtaccggac gtttttctcc
      241 gagaaataat aaacttattt caactaaagt taaattcagc ttcaatggat taccaccgat
      301 ttcttcgttt gatggtgcct ccgttgattt cgctgcaatt gttagccgtg ctgaaagctt
      361 aatgtatact ttagctgatg ccgctgttgc tgttgattct gctgcctctg tttccggcga
      421 cacgacggtt actacgacgg tgcagaagtc cggaggatgg ttcggattta tttccgatgc
      481 catggaagtt gttttgaagg tactgaagga tggactaact gccgttcatg tgccatatgc
      541 gtatggattt gcaattatat tgcttactgt tcttgttaag cttgttacct tgccattgac
      601 aaagcaacag gttgagtcca ctctcgctat gcaaaacctt cagccgaagc tcaaagcaat
      661 tcaacaaaga tatgcaggaa atcaggaaag aatacaactt gagacatcac ggttatataa
      721 acaggctggg gtaaatcctt tggcaggatg tttacctact ttggccacaa taccagtatg
      781 gataggcttg tatcaagctc tttcaaatgt tgcaaatgag ggactgttca ctgagggctt
      841 tttctggatt ccctctttgg gaggcccgac tacgattgct gctcgacaaa gtggatccgg
      901 agtttcttgg ctcttcccat ttgtggatgg gcatccacca ctaggttggc acgacacagc
      961 agcttacctt gttttaccgg ttcttcttgt tctttctcaa tatgtatcca tggagatcat
     1021 gaagccaccc caaactgatg atccggctca gaaaaacact cttctcgtct tcaagtttct
     1081 tccactcatg attggttatt tttctttgtc cgtcccatca gggttatcaa tttactggtt
     1141 cacaaacaac gtgctgagta ctgcccagca agtatggtta aggaagttgg gaggtgcaaa
     1201 gcctgctgta gatgagaatg caggtggaat aataagtgca ggtcgtgcaa agcgatcttc
     1261 ttctcaacct tcagagtctg gttctaggtt taagcagcta aaagaagaag aaaagagaaa
     1321 atcaactaag gcagtggctg accaagatgt tcaggttttg gcatccacat ccgagtctga
     1381 gcaagataca gatgaagaaa caaagtccac ggaggttttg gaagaggcgt atgcatcatc
     1441 tagcacaagc aaaccagttc cagttccagt tccagttccc gggaggagta agagatcaaa
     1501 gagaaagcgt tcggtatgat ccaaatatat gtgtagctgt attttctatt cttgtatttt
     1561 gtaaaaatcc gtattttagt taatatatat agctgccatt ttctgctggc tgatttactt
     1621 tttatactag caacagtagt ctacattctc attaaaaagt gatataaatc cccattttgc
     1681 atgtaga
//
LOCUS       XM_071830646            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840380), transcript variant X1, mRNA.
ACCESSION   XM_071830646
VERSION     XM_071830646.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139840380"
                     /note="uncharacterized LOC139840380; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840380"
     CDS             50..937
                     /gene="LOC139840380"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686747.1"
                     /db_xref="GeneID:139840380"
                     /translation="MSIFRRRGSSQPQQEQERPELQSEAKVNELKAALGPLSGRNLLY
                     CTDACLRRYLEARNWNVDKAKKMLEETLAWRSTYKPEEIRWHEVAVEGETGKLFRANF
                     RDRVGRTVLILKPGLQNTTSMDNQIKHLVYLMENAMLSLPEGQEEMAWLIDFTGWSFS
                     ASVPVKTARDTINILQDHYPQRLAVAFLYTPPRIFEAFWKIVKYFIDPKTTQKVKFVY
                     PKNKESVELMRSYFDVDNLPTEFGGNATMKYDHEDFSRLMAQDDVKAAKFWGFDEKNV
                     SATNGYVAGAAVAPDPVTV"
     misc_feature    119..262
                     /gene="LOC139840380"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    326..781
                     /gene="LOC139840380"
                     /note="Sec14p-like lipid-binding domain; Region: SEC14;
                     cd00170"
                     /db_xref="CDD:469559"
     polyA_site      1038
                     /gene="LOC139840380"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgcgattcca tttttccatt acatcgcaaa agttgcagta atcgtaacca tgtccatttt
       61 tcggcggcgt ggatcgtctc agccgcagca agagcaggag cgtcccgaat tgcaatcaga
      121 ggccaaggtc aatgagctta aagctgcgct tggaccctta tctggacgca acttattgta
      181 ctgcactgac gcttgcttga gaagatatct ggaagcccga aactggaatg tagacaaagc
      241 taagaaaatg ttggaagaaa cacttgcttg gagatcaact tataagcctg aagaaatacg
      301 ttggcatgaa gttgcagttg aaggtgaaac agggaaactg ttcagagcaa atttccgtga
      361 ccgagttgga agaactgttt tgatattaaa acccggattg cagaatacga catcaatgga
      421 caaccagatc aaacatcttg tatacctaat ggaaaacgct atgctaagtc ttccagaagg
      481 ccaggaagaa atggcatggt taatagactt taccggttgg tcatttagcg ccagtgtacc
      541 ggttaaaaca gccagggaca ctatcaatat actgcaagac cattatcctc aaaggctagc
      601 tgtcgcgttt ttgtacactc cacctcgaat ctttgaagct ttttggaaga ttgttaaata
      661 tttcattgac ccaaaaacaa cccagaaggt gaaatttgtg tacccaaaga acaaagagag
      721 tgtagagcta atgagatcgt attttgatgt ggataacctc ccaactgagt ttggtggaaa
      781 cgcaaccatg aagtatgatc atgaagattt ctcaaggtta atggctcagg atgatgttaa
      841 agctgctaaa ttttggggtt ttgatgaaaa gaatgtttct gcaaccaatg gctatgttgc
      901 tggtgcagca gtggctcccg atcccgttac tgtatgatta aatggttaac tgatatggca
      961 gttagattaa atgatggctt caaaccttaa tggtgatgtc ctctttgcta attttatgtt
     1021 tgatccctaa attatgta
//
LOCUS       XM_071830647            1080 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840380), transcript variant X2, mRNA.
ACCESSION   XM_071830647
VERSION     XM_071830647.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1080
                     /gene="LOC139840380"
                     /note="uncharacterized LOC139840380; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840380"
     CDS             92..979
                     /gene="LOC139840380"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686748.1"
                     /db_xref="GeneID:139840380"
                     /translation="MSIFRRRGSSQPQQEQERPELQSEAKVNELKAALGPLSGRNLLY
                     CTDACLRRYLEARNWNVDKAKKMLEETLAWRSTYKPEEIRWHEVAVEGETGKLFRANF
                     RDRVGRTVLILKPGLQNTTSMDNQIKHLVYLMENAMLSLPEGQEEMAWLIDFTGWSFS
                     ASVPVKTARDTINILQDHYPQRLAVAFLYTPPRIFEAFWKIVKYFIDPKTTQKVKFVY
                     PKNKESVELMRSYFDVDNLPTEFGGNATMKYDHEDFSRLMAQDDVKAAKFWGFDEKNV
                     SATNGYVAGAAVAPDPVTV"
     misc_feature    161..304
                     /gene="LOC139840380"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    368..823
                     /gene="LOC139840380"
                     /note="Sec14p-like lipid-binding domain; Region: SEC14;
                     cd00170"
                     /db_xref="CDD:469559"
     polyA_site      1080
                     /gene="LOC139840380"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actatcaaca cttttctcca gatattattt tgcaatcgaa ggtgcgtttc tcgcacattt
       61 tgatcttcgt gtctttgcag taatcgtaac catgtccatt tttcggcggc gtggatcgtc
      121 tcagccgcag caagagcagg agcgtcccga attgcaatca gaggccaagg tcaatgagct
      181 taaagctgcg cttggaccct tatctggacg caacttattg tactgcactg acgcttgctt
      241 gagaagatat ctggaagccc gaaactggaa tgtagacaaa gctaagaaaa tgttggaaga
      301 aacacttgct tggagatcaa cttataagcc tgaagaaata cgttggcatg aagttgcagt
      361 tgaaggtgaa acagggaaac tgttcagagc aaatttccgt gaccgagttg gaagaactgt
      421 tttgatatta aaacccggat tgcagaatac gacatcaatg gacaaccaga tcaaacatct
      481 tgtataccta atggaaaacg ctatgctaag tcttccagaa ggccaggaag aaatggcatg
      541 gttaatagac tttaccggtt ggtcatttag cgccagtgta ccggttaaaa cagccaggga
      601 cactatcaat atactgcaag accattatcc tcaaaggcta gctgtcgcgt ttttgtacac
      661 tccacctcga atctttgaag ctttttggaa gattgttaaa tatttcattg acccaaaaac
      721 aacccagaag gtgaaatttg tgtacccaaa gaacaaagag agtgtagagc taatgagatc
      781 gtattttgat gtggataacc tcccaactga gtttggtgga aacgcaacca tgaagtatga
      841 tcatgaagat ttctcaaggt taatggctca ggatgatgtt aaagctgcta aattttgggg
      901 ttttgatgaa aagaatgttt ctgcaaccaa tggctatgtt gctggtgcag cagtggctcc
      961 cgatcccgtt actgtatgat taaatggtta actgatatgg cagttagatt aaatgatggc
     1021 ttcaaacctt aatggtgatg tcctctttgc taattttatg tttgatccct aaattatgta
//
LOCUS       XM_071830648            1061 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840380), transcript variant X3, mRNA.
ACCESSION   XM_071830648
VERSION     XM_071830648.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1061
                     /gene="LOC139840380"
                     /note="uncharacterized LOC139840380; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840380"
     CDS             73..960
                     /gene="LOC139840380"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686749.1"
                     /db_xref="GeneID:139840380"
                     /translation="MSIFRRRGSSQPQQEQERPELQSEAKVNELKAALGPLSGRNLLY
                     CTDACLRRYLEARNWNVDKAKKMLEETLAWRSTYKPEEIRWHEVAVEGETGKLFRANF
                     RDRVGRTVLILKPGLQNTTSMDNQIKHLVYLMENAMLSLPEGQEEMAWLIDFTGWSFS
                     ASVPVKTARDTINILQDHYPQRLAVAFLYTPPRIFEAFWKIVKYFIDPKTTQKVKFVY
                     PKNKESVELMRSYFDVDNLPTEFGGNATMKYDHEDFSRLMAQDDVKAAKFWGFDEKNV
                     SATNGYVAGAAVAPDPVTV"
     misc_feature    142..285
                     /gene="LOC139840380"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    349..804
                     /gene="LOC139840380"
                     /note="Sec14p-like lipid-binding domain; Region: SEC14;
                     cd00170"
                     /db_xref="CDD:469559"
     polyA_site      1061
                     /gene="LOC139840380"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgattacagt aattactatc aacacttttc tccagatatt attttgcaat cgaagttgca
       61 gtaatcgtaa ccatgtccat ttttcggcgg cgtggatcgt ctcagccgca gcaagagcag
      121 gagcgtcccg aattgcaatc agaggccaag gtcaatgagc ttaaagctgc gcttggaccc
      181 ttatctggac gcaacttatt gtactgcact gacgcttgct tgagaagata tctggaagcc
      241 cgaaactgga atgtagacaa agctaagaaa atgttggaag aaacacttgc ttggagatca
      301 acttataagc ctgaagaaat acgttggcat gaagttgcag ttgaaggtga aacagggaaa
      361 ctgttcagag caaatttccg tgaccgagtt ggaagaactg ttttgatatt aaaacccgga
      421 ttgcagaata cgacatcaat ggacaaccag atcaaacatc ttgtatacct aatggaaaac
      481 gctatgctaa gtcttccaga aggccaggaa gaaatggcat ggttaataga ctttaccggt
      541 tggtcattta gcgccagtgt accggttaaa acagccaggg acactatcaa tatactgcaa
      601 gaccattatc ctcaaaggct agctgtcgcg tttttgtaca ctccacctcg aatctttgaa
      661 gctttttgga agattgttaa atatttcatt gacccaaaaa caacccagaa ggtgaaattt
      721 gtgtacccaa agaacaaaga gagtgtagag ctaatgagat cgtattttga tgtggataac
      781 ctcccaactg agtttggtgg aaacgcaacc atgaagtatg atcatgaaga tttctcaagg
      841 ttaatggctc aggatgatgt taaagctgct aaattttggg gttttgatga aaagaatgtt
      901 tctgcaacca atggctatgt tgctggtgca gcagtggctc ccgatcccgt tactgtatga
      961 ttaaatggtt aactgatatg gcagttagat taaatgatgg cttcaaacct taatggtgat
     1021 gtcctctttg ctaattttat gtttgatccc taaattatgt a
//
LOCUS       XM_071830650            1058 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840380), transcript variant X4, mRNA.
ACCESSION   XM_071830650
VERSION     XM_071830650.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1058
                     /gene="LOC139840380"
                     /note="uncharacterized LOC139840380; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840380"
     CDS             70..957
                     /gene="LOC139840380"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686751.1"
                     /db_xref="GeneID:139840380"
                     /translation="MSIFRRRGSSQPQQEQERPELQSEAKVNELKAALGPLSGRNLLY
                     CTDACLRRYLEARNWNVDKAKKMLEETLAWRSTYKPEEIRWHEVAVEGETGKLFRANF
                     RDRVGRTVLILKPGLQNTTSMDNQIKHLVYLMENAMLSLPEGQEEMAWLIDFTGWSFS
                     ASVPVKTARDTINILQDHYPQRLAVAFLYTPPRIFEAFWKIVKYFIDPKTTQKVKFVY
                     PKNKESVELMRSYFDVDNLPTEFGGNATMKYDHEDFSRLMAQDDVKAAKFWGFDEKNV
                     SATNGYVAGAAVAPDPVTV"
     misc_feature    139..282
                     /gene="LOC139840380"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    346..801
                     /gene="LOC139840380"
                     /note="Sec14p-like lipid-binding domain; Region: SEC14;
                     cd00170"
                     /db_xref="CDD:469559"
     polyA_site      1058
                     /gene="LOC139840380"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttgattac agtaattact atcaacactt ttctccagat attattttgc aatcgaagta
       61 atcgtaacca tgtccatttt tcggcggcgt ggatcgtctc agccgcagca agagcaggag
      121 cgtcccgaat tgcaatcaga ggccaaggtc aatgagctta aagctgcgct tggaccctta
      181 tctggacgca acttattgta ctgcactgac gcttgcttga gaagatatct ggaagcccga
      241 aactggaatg tagacaaagc taagaaaatg ttggaagaaa cacttgcttg gagatcaact
      301 tataagcctg aagaaatacg ttggcatgaa gttgcagttg aaggtgaaac agggaaactg
      361 ttcagagcaa atttccgtga ccgagttgga agaactgttt tgatattaaa acccggattg
      421 cagaatacga catcaatgga caaccagatc aaacatcttg tatacctaat ggaaaacgct
      481 atgctaagtc ttccagaagg ccaggaagaa atggcatggt taatagactt taccggttgg
      541 tcatttagcg ccagtgtacc ggttaaaaca gccagggaca ctatcaatat actgcaagac
      601 cattatcctc aaaggctagc tgtcgcgttt ttgtacactc cacctcgaat ctttgaagct
      661 ttttggaaga ttgttaaata tttcattgac ccaaaaacaa cccagaaggt gaaatttgtg
      721 tacccaaaga acaaagagag tgtagagcta atgagatcgt attttgatgt ggataacctc
      781 ccaactgagt ttggtggaaa cgcaaccatg aagtatgatc atgaagattt ctcaaggtta
      841 atggctcagg atgatgttaa agctgctaaa ttttggggtt ttgatgaaaa gaatgtttct
      901 gcaaccaatg gctatgttgc tggtgcagca gtggctcccg atcccgttac tgtatgatta
      961 aatggttaac tgatatggca gttagattaa atgatggctt caaaccttaa tggtgatgtc
     1021 ctctttgcta attttatgtt tgatccctaa attatgta
//
LOCUS       XM_071830651            1066 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840380), transcript variant X5, mRNA.
ACCESSION   XM_071830651
VERSION     XM_071830651.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1066
                     /gene="LOC139840380"
                     /note="uncharacterized LOC139840380; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840380"
     CDS             78..965
                     /gene="LOC139840380"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686752.1"
                     /db_xref="GeneID:139840380"
                     /translation="MSIFRRRGSSQPQQEQERPELQSEAKVNELKAALGPLSGRNLLY
                     CTDACLRRYLEARNWNVDKAKKMLEETLAWRSTYKPEEIRWHEVAVEGETGKLFRANF
                     RDRVGRTVLILKPGLQNTTSMDNQIKHLVYLMENAMLSLPEGQEEMAWLIDFTGWSFS
                     ASVPVKTARDTINILQDHYPQRLAVAFLYTPPRIFEAFWKIVKYFIDPKTTQKVKFVY
                     PKNKESVELMRSYFDVDNLPTEFGGNATMKYDHEDFSRLMAQDDVKAAKFWGFDEKNV
                     SATNGYVAGAAVAPDPVTV"
     misc_feature    147..290
                     /gene="LOC139840380"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    354..809
                     /gene="LOC139840380"
                     /note="Sec14p-like lipid-binding domain; Region: SEC14;
                     cd00170"
                     /db_xref="CDD:469559"
     polyA_site      1066
                     /gene="LOC139840380"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacttttctc cagatattat tttgcaatcg aaggtgcgtt tctcgcacat tttgatcttc
       61 gtgtcttaat cgtaaccatg tccatttttc ggcggcgtgg atcgtctcag ccgcagcaag
      121 agcaggagcg tcccgaattg caatcagagg ccaaggtcaa tgagcttaaa gctgcgcttg
      181 gacccttatc tggacgcaac ttattgtact gcactgacgc ttgcttgaga agatatctgg
      241 aagcccgaaa ctggaatgta gacaaagcta agaaaatgtt ggaagaaaca cttgcttgga
      301 gatcaactta taagcctgaa gaaatacgtt ggcatgaagt tgcagttgaa ggtgaaacag
      361 ggaaactgtt cagagcaaat ttccgtgacc gagttggaag aactgttttg atattaaaac
      421 ccggattgca gaatacgaca tcaatggaca accagatcaa acatcttgta tacctaatgg
      481 aaaacgctat gctaagtctt ccagaaggcc aggaagaaat ggcatggtta atagacttta
      541 ccggttggtc atttagcgcc agtgtaccgg ttaaaacagc cagggacact atcaatatac
      601 tgcaagacca ttatcctcaa aggctagctg tcgcgttttt gtacactcca cctcgaatct
      661 ttgaagcttt ttggaagatt gttaaatatt tcattgaccc aaaaacaacc cagaaggtga
      721 aatttgtgta cccaaagaac aaagagagtg tagagctaat gagatcgtat tttgatgtgg
      781 ataacctccc aactgagttt ggtggaaacg caaccatgaa gtatgatcat gaagatttct
      841 caaggttaat ggctcaggat gatgttaaag ctgctaaatt ttggggtttt gatgaaaaga
      901 atgtttctgc aaccaatggc tatgttgctg gtgcagcagt ggctcccgat cccgttactg
      961 tatgattaaa tggttaactg atatggcagt tagattaaat gatggcttca aaccttaatg
     1021 gtgatgtcct ctttgctaat tttatgtttg atccctaaat tatgta
//
LOCUS       XM_071830652            2837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable disease resistance
            protein At4g33300 (LOC139840381), mRNA.
ACCESSION   XM_071830652
VERSION     XM_071830652.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2837
                     /gene="LOC139840381"
                     /note="probable disease resistance protein At4g33300;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139840381"
     CDS             134..2611
                     /gene="LOC139840381"
                     /codon_start=1
                     /product="probable disease resistance protein At4g33300"
                     /protein_id="XP_071686753.1"
                     /db_xref="GeneID:139840381"
                     /translation="MAVTDFFAGEIATELLKMLLTITTKAILFKKSAEHLYKTVNQLL
                     PIITEIKYSGVELPGPRQMQLDKISQTLNEGRELATKVLNSSRWNVYKNHQLLRKMDK
                     TEKKISRFLQGPIQAHVLADVHHLRVEANERFDRIEGSARRLERRLGSMKLAWNDDEY
                     GAEEMFEGNLVNVGMQLGLRKVKDMILDDDHNSFKVFGINGIGGSGKTTLVKEICRDN
                     EVRRYYNNKILVLTVSQCPNVEELRQKILGFVSKSKFNGYSNMNIASQWTLQFNNNNN
                     NWNMVVPILIVLDDVWSLEVLQQLIYKVPGCKTVVVSRIKFQSLMLNSTYELELLREE
                     DAISLFCHNAFGTTSIPSGVDRNMIKQIVEKCKGLPLALKVIGASLRDQPEKYWEAAK
                     NRLSKAQPICDSHENELLNRMKLSVDCLSDQKVRDCFLDLGAFVEDKNIPLDVLVNMW
                     TELHDIDEEDAFAILVELSNKNLITLVKHSRAGDMYGSYYEISVSQHDVLRDLAIYMS
                     NFESVNQRKRLVMARRENGVPKEWERNADEPFLARIVSVHTGEMREMDWFKMEFPKAE
                     VLILNFDSTDYFLPPFIENMPKLRALVLINYSKTAQLHNISVLGTLTNLRSLWFEKVT
                     IPHLPKKSISPLTNVQKLSLHLCKINFKDETELDLCYLFPCLTELTMDHCVEMTKLPS
                     SVCQLKSLKSLSITNCESFEELPFDFGKLIFLHILRVYACPKLKTLPYGIKDLVWLQH
                     INVSQCVSLHSLNEEIGGCLSLKEIDMHECPQIKMLPKCVSSLRSLRRVICDEEISWQ
                     WKGMEKELSSLCVQVAEQRYDLDWLKE"
     misc_feature    158..529
                     /gene="LOC139840381"
                     /note="Arabidopsis broad-spectrum mildew resistance
                     protein RPW8; Region: RPW8; pfam05659"
                     /db_xref="CDD:398988"
     misc_feature    668..1387
                     /gene="LOC139840381"
                     /note="NB-ARC domain; Region: NB-ARC; pfam00931"
                     /db_xref="CDD:395745"
     misc_feature    1898..1975
                     /gene="LOC139840381"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    <1940..>2500
                     /gene="LOC139840381"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     Region: LRR; COG4886"
                     /db_xref="CDD:443914"
     misc_feature    1976..2047
                     /gene="LOC139840381"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2048..2128
                     /gene="LOC139840381"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2129..2200
                     /gene="LOC139840381"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2273..2344
                     /gene="LOC139840381"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2345..2416
                     /gene="LOC139840381"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2417..2479
                     /gene="LOC139840381"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     polyA_site      2837
                     /gene="LOC139840381"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtacttttta ttgcaacaac ataatatccc aaaagcaact cttactttat tatcgacata
       61 aaattaacaa cataaatact caacccatct cccttccctc caaacctcac cggcgccggt
      121 gacaaatcaa aaaatggcgg taactgattt cttcgccgga gaaattgcca ctgagctact
      181 aaaaatgcta cttaccataa caacaaaagc aattttattc aaaaaaagtg ccgaacatct
      241 ttacaaaaca gtcaaccaac tccttccaat tataaccgaa atcaaatact ccggtgtcga
      301 attacccggc ccacgtcaga tgcaactcga caagatatca caaacactta acgaaggccg
      361 tgaactcgcc acaaaagtcc taaactctag ccgttggaac gtgtacaaaa accatcaatt
      421 attgcgaaaa atggacaaaa cagaaaagaa gatatcaagg tttcttcaag gaccaatcca
      481 agctcacgtg cttgctgatg tgcaccattt gagggtcgaa gcaaatgaac gttttgatcg
      541 aattgaaggc tcagctcgta ggcttgaaag acgacttggg tcgatgaaac ttgcatggaa
      601 tgatgatgaa tatggtgcag aggagatgtt tgagggtaat ttagtaaatg tagggatgca
      661 attaggatta agaaaagtga aagatatgat tcttgatgat gatcataata gtttcaaagt
      721 ttttgggatt aatggaattg gtggaagtgg taaaactact ctagttaaag aaatttgtcg
      781 cgataatgaa gttcgacgtt attacaataa caagattctg gtgctgacag tttcacagtg
      841 tccaaatgtg gaagaattaa gacaaaagat tttgggattt gtttctaaaa gcaagtttaa
      901 tggttattct aatatgaata ttgcatctca atggacactt cagtttaata ataataataa
      961 taattggaac atggtggttc ctattttaat agttttggat gatgtttggt ctcttgaagt
     1021 tcttcaacaa cttatttata aagttcctgg ttgtaagact gttgtggttt cgcgtattaa
     1081 gtttcaatct ttgatgttaa actcaacgta cgagttggag ttgttaagag aagaagatgc
     1141 aatttcactt ttttgtcaca atgcttttgg taccacttca attccttctg gtgtagatag
     1201 gaatatgatt aaacagattg tggagaaatg taaagggctg cctttagcac taaaagtgat
     1261 aggagcttca ttaagagacc aacctgaaaa gtattgggaa gcagctaaaa atcggttgtc
     1321 aaaagctcaa ccgatatgtg actcacacga aaatgagttg cttaatcgga tgaaattaag
     1381 cgttgattgc ctttcagatc aaaaggttcg agattgtttt ttggatttgg gtgctttcgt
     1441 agaggataaa aatatacctt tagatgttct tgtaaatatg tggacagaac ttcatgatat
     1501 tgatgaagaa gatgcttttg ctatccttgt tgagctctca aacaagaatc ttatcacact
     1561 tgttaaacat tcaagggctg gggatatgta tggtagctac tatgagattt cggtgtctca
     1621 acatgatgtg ttaagagatc ttgcaattta tatgagcaat tttgagagtg taaatcagcg
     1681 aaaaagattg gttatggcta ggagagaaaa tggggttcct aaagaatggg aaagaaatgc
     1741 cgatgagcca tttttggcgc gaattgtctc tgttcataca ggcgaaatgc gagaaatgga
     1801 ttggttcaaa atggaatttc ctaaagctga agttttgatc ttgaacttcg actcaactga
     1861 ttatttcttg cctcctttta tcgaaaacat gcctaaacta agagccttgg tgttaataaa
     1921 ctacagtaaa acagcacaac ttcataacat ttcagtctta ggtaccttaa ccaatttaag
     1981 aagcctttgg ttcgaaaaag tgaccatccc tcatctacca aaaaagtcca tttcgcccct
     2041 cacaaatgtt caaaaattat ctttacatct ttgtaagata aacttcaaag atgaaacaga
     2101 actcgacctc tgttacttat tcccttgcct cacagaactc acgatggatc actgtgtcga
     2161 aatgaccaaa ctaccctcaa gtgtatgcca actgaaatca ctaaagagtc taagcatcac
     2221 caactgtgaa agctttgaag aactcccatt tgattttggt aaactgatct ttttacatat
     2281 tttgagagtt tacgcgtgtc caaagcttaa aacgctgcca tatgggatca aggatcttgt
     2341 atggttacaa catattaatg tctcacaatg tgtcagtctt cattctctta atgaagaaat
     2401 tggtggttgt ttgagtttaa aagaaatcga tatgcacgaa tgcccgcaaa taaaaatgtt
     2461 accaaaatgt gtatcgagtt tgagatcgtt gagacgggta atatgtgatg aagagatttc
     2521 atggcaatgg aaaggcatgg agaaagagtt gtccagttta tgtgttcaag ttgcagaaca
     2581 gcgttatgat cttgactggc ttaaagagtg aaagtctcat tattagtttt gatttttaaa
     2641 cttttgtatc tacaaagtag agtagattat tgatatgtag ataaattggt tagagaataa
     2701 agaggcttct tggcacttct gttttttgtt tcaagtggaa gcaataccgg ttgtgctaat
     2761 aaagtatgta tgcttcttgc ctctagttaa caagcgaata taaataatac tccgtaatta
     2821 aatatgtata tgttgga
//
LOCUS       XM_071830653            1410 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dof zinc finger protein
            DOF3.6-like (LOC139840382), mRNA.
ACCESSION   XM_071830653
VERSION     XM_071830653.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1410
                     /gene="LOC139840382"
                     /note="dof zinc finger protein DOF3.6-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139840382"
     CDS             104..1075
                     /gene="LOC139840382"
                     /codon_start=1
                     /product="dof zinc finger protein DOF3.6-like"
                     /protein_id="XP_071686754.1"
                     /db_xref="GeneID:139840382"
                     /translation="MVFSSLPPYLDHHNWHLQLQQSNHQQASVGGAENPNLQPPPPPQ
                     PGGGGGGGSGEGSIRPGSMVDRARMAKLPMPEPGLNCPRCDSTNTKFCYYNNYNLNQP
                     RHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSRKNGSSKSPNQNAPKSVSESPSRGSI
                     ETMPSTQFSHPSSLQLPFMNSLTQYGGVGGNITSNLGGFQPQSEMGNYQLGGGSSNGN
                     NFNNVLSIGGVENWRLPFLAGFEVPNNTNLFHYQNESVAEAPQSSIIGGDQTRITNSE
                     IENSTQVDPPVKREDNRSFNQQTWGRNTWSEFSSATSTSTTPTTHFI"
     misc_feature    338..505
                     /gene="LOC139840382"
                     /note="Dof domain, zinc finger; Region: zf-Dof; pfam02701"
                     /db_xref="CDD:397014"
     polyA_site      1410
                     /gene="LOC139840382"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcttgttaa gttttgattc cctacactca tatattatca aaaataaaac cctttaaata
       61 ctttctaaaa gagataaaga gagaacaaat aagtaattaa aacatggttt tctcatcact
      121 tccaccctat cttgatcacc acaattggca tctacagttg caacaatcaa accatcaaca
      181 agcaagcgtt ggaggtgccg aaaaccctaa cctccaacca ccacctccgc cacaacctgg
      241 tggtggaggt ggtggtggaa gtggagaagg ttctattaga ccgggatcta tggtagatcg
      301 agcacgtatg gccaagctac ccatgccaga accaggacta aactgtccac gttgcgattc
      361 aaccaacacc aaattttgct actacaacaa ctataacctc aaccaacctc gacacttttg
      421 caagacgtgt agacgttatt ggactcgtgg tggcgctcta agaaatgttc cggttggggg
      481 aggttgtagg aggaacaaaa ggagtagaaa aaatggaagc tcaaaatctc caaaccaaaa
      541 cgcgcctaaa tctgtcagcg aaagtccatc aaggggtagc atagaaacta tgccaagtac
      601 tcaattttct catccttcat ctcttcaatt accatttatg aactctctta ctcaatatgg
      661 aggtgttggt ggtaatataa cctcaaatct tggtggattt caacctcaaa gtgaaatggg
      721 aaattatcaa ttaggaggtg gaagctcaaa tgggaataat tttaacaatg tgttatcaat
      781 tggaggggtt gaaaattgga gattgccatt cttggctgga tttgaggtac caaataacac
      841 taatctattt cactatcaaa atgaaagtgt agctgaagcg ccacaatcat cgatcatagg
      901 aggtgatcaa acacgaatta caaactctga aatcgaaaat agtactcaag tagatcctcc
      961 ggtgaagagg gaagacaacc gaagctttaa tcagcaaaca tggggaagaa acacgtggag
     1021 tgagttttct agtgcgacga gtacttctac tactcctaca acacatttca tataatttgg
     1081 ctatattctt ctttgatatc cagtgatgca ttacaagtga atttcagctt acagtacgtt
     1141 gcatgtagta gtgtaattat aatgaaagta ctgaactgat caaattagga tcattcaagc
     1201 cccctaggta gctacaaaga atatgttcaa tctcaagatc aactaaatta gggttccaca
     1261 tcaacgtttg atcgtgtgct gatggtggac taaaggtagg tttacttttt taattaagtt
     1321 ggagctgaga gtattatctt gtgtttcttg attctattaa ttaatgtgtg taagtttagt
     1381 tgtactttta tgtggtatgt tccaataaca
//
LOCUS       XM_071830654            1820 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides autophagy-related protein 16
            (LOC139840383), transcript variant X1, mRNA.
ACCESSION   XM_071830654
VERSION     XM_071830654.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1820
                     /gene="LOC139840383"
                     /note="autophagy-related protein 16; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840383"
     CDS             80..1612
                     /gene="LOC139840383"
                     /codon_start=1
                     /product="autophagy-related protein 16 isoform X1"
                     /protein_id="XP_071686755.1"
                     /db_xref="GeneID:139840383"
                     /translation="MSEDEIAIHQAIKHALKSLRKRHLLEEGAHGPAYEAISKPIATQ
                     GSEWKEKAETLELELQQCYKAQSRLSEQLVVEVAESRAAKSLVQEKEALIPTLENDLS
                     QARDECSRLAALLEEKTKAVELLIGENKSLKSQYEDMRTRAINAEAENKTLIDRWMLQ
                     KMQDAERLNEANALYEDMLDKLKASGLEQLARQQVDGVVRQSEEGAEYYVETTMPKTC
                     SHRITAHNGGCAAIVFENSSAKLVSGGQDHTVKMWDSITGQLTRTYNGCLGSVLDLTI
                     THDNKNVIAASSSNNLYVWDANSGRVRHTLTGHKDKVCAVDVSRSSSRHVVSSGYDRT
                     IKVWDLNKGYCVNTIIFPSNCNALSFSPDGQTICSGHVDGHLRLWDMQSGKLLSEVAA
                     HSLAVTSISLSRNGNSILTSGRDNLHNLFDTRTLEVLRTFRASENRVASNWSRSCISA
                     DDNYVASGSVDGSVHVWSVSNGNIVSTLKEHASSVLCCSWSGLGKPLATTDKNGVICI
                     WK"
     misc_feature    <143..>691
                     /gene="LOC139840383"
                     /note="Myosin tail; Region: Myosin_tail_1; pfam01576"
                     /db_xref="CDD:460256"
     misc_feature    329..595
                     /gene="LOC139840383"
                     /note="Coiled-coiled domain of autophagy-related 16
                     (Atg16) family proteins; Region: Atg16_CCD; cd22887"
                     /db_xref="CDD:439196"
     misc_feature    order(338..340,347..352,356..361,368..370,377..382,
                     389..394,398..403,410..415,422..424,431..436,443..445,
                     452..457,461..466,473..475,482..487,494..499,503..508,
                     515..520,524..529,536..541,545..550,557..559)
                     /gene="LOC139840383"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:439196"
     misc_feature    731..1609
                     /gene="LOC139840383"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    order(752..754,806..808,818..820,836..841,875..880,
                     932..934,944..946,962..967,1001..1006,1058..1060,
                     1073..1075,1091..1096,1133..1135,1181..1183,1196..1198,
                     1214..1219,1253..1258,1310..1312,1322..1324,1340..1345,
                     1379..1384,1445..1447,1460..1462,1478..1483,1517..1522,
                     1574..1576,1586..1588,1604..1609)
                     /gene="LOC139840383"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    764..877
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    893..1003
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1016..1135
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1145..1252
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1268..1378
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1409..1516
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1532..1606
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 agaaaacctt cattcatcag aatcatcaaa caaccgctaa aacctaaata tcaaattcat
       61 catcatcatc atcatcatca tgtcagaaga cgaaattgcg attcatcaag caataaaaca
      121 tgcgttaaaa tcgttacgaa aacggcattt acttgaagaa ggagctcatg gaccggctta
      181 tgaagcaatt tctaaaccta ttgccactca gggttcagaa tggaaggaaa aagcagaaac
      241 tcttgaattg gagcttcagc agtgttataa agctcaatct cgattatccg agcagcttgt
      301 ggtggaagtt gctgagtcac gagctgcaaa gtctttagtt caagaaaagg aagctttaat
      361 tcctacactt gagaatgatc tttcacaagc aagggacgaa tgttctcggt tggcagcact
      421 cttagaagaa aagactaaag ctgtagaatt gcttatcggt gagaataagt ctctcaaatc
      481 tcaatatgaa gatatgcgaa ctagagccat taacgcggaa gctgaaaaca agacattgat
      541 tgaccgatgg atgctgcaga aaatgcagga tgctgaacgc cttaatgagg ccaatgcttt
      601 atatgaagac atgcttgata agctcaaagc cagtggtctg gaacaacttg ctaggcaaca
      661 agtggacggt gtggtccgcc aaagcgaaga aggtgcagag tactacgtcg aaacaaccat
      721 gcccaaaacc tgcagtcaca gaataacagc tcataatgga ggctgtgcgg ctatagtttt
      781 cgaaaacagt tctgctaaat tggtcagcgg gggccaggac catactgtta aaatgtggga
      841 ctcaatcacc ggtcagttaa ctagaaccta caacggctgt ttaggttctg ttcttgatct
      901 caccattact catgataaca aaaatgtaat agcagcaagt agttcaaata atctctatgt
      961 atgggatgcg aattcgggtc gggttagaca tactctcacg ggtcataaag ataaagtatg
     1021 tgctgttgat gtaagcagat cctcaagccg ccatgttgtc agttctggtt atgaccgcac
     1081 cattaaagtg tgggatctta ataaaggcta ttgtgttaac acgattattt ttccaagtaa
     1141 ttgtaatgcg ttgtctttta gcccagatgg gcagacgatt tgttcgggtc atgttgatgg
     1201 gcatttaaga ttatgggata tgcagtcagg gaaattgtta agtgaagttg ctgcacattc
     1261 tcttgctgtg acgtctattt cgttatctag aaacggtaac tcgatattga caagtggaag
     1321 agataatttg cataatttgt ttgatacaag gacacttgaa gtgttgagga catttagagc
     1381 tagtgagaac agagttgcat ctaattggag cagatcttgt ataagtgctg atgacaatta
     1441 tgttgcttct ggatctgttg atggttcggt tcatgtttgg tctgtttcga atggtaatat
     1501 agtcagcacg cttaaggaac atgcatcttc ggtattgtgt tgttcttgga gtggtcttgg
     1561 aaaaccttta gctacgacag acaaaaatgg tgtcatttgc atctggaaat gatgacttac
     1621 catatatcaa catgtaatta gtttgtacat tacttgtttc gtcagtcaat tcgttacata
     1681 tgtgcgtgtt ttgcttagct gattgttttg tttttcgatt gttagctgta gcatgaagct
     1741 ttgtttgaaa ttcttactaa aattccacag gagtcttgga gtcttatgcc aacacattgt
     1801 tacccgaaat tctttttcaa
//
LOCUS       XM_071830655            1752 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides autophagy-related protein 16
            (LOC139840383), transcript variant X2, mRNA.
ACCESSION   XM_071830655
VERSION     XM_071830655.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1752
                     /gene="LOC139840383"
                     /note="autophagy-related protein 16; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840383"
     CDS             12..1544
                     /gene="LOC139840383"
                     /codon_start=1
                     /product="autophagy-related protein 16 isoform X2"
                     /protein_id="XP_071686756.1"
                     /db_xref="GeneID:139840383"
                     /translation="MSEDEIAIHQAIKHALKSLRKRHLLEEGAHGPAYEAISKPIATQ
                     GSEWKEKAETLELELQQCYKAQSRLSEQLVVEVAESRAAKSLVQEKEALIPTLENDLS
                     QARDECSRLAALLEEKTKAVELLIGENKSLKSQYEDMRTRAINAEAENKTLIDRWMLQ
                     KMQDAERLNEANALYEDMLDKLKASGLEQLARQQVDGVVRQSEEGAEYYVETTMPKTC
                     SHRITAHNGGCAAIVFENSSAKLVSGGQDHTVKMWDSITGQLTRTYNGCLGSVLDLTI
                     THDNKNVIAASSSNNLYVWDANSGRVRHTLTGHKDKVCAVDVSRSSSRHVVSSGYDRT
                     IKVWDLNKGYCVNTIIFPSNCNALSFSPDGQTICSGHVDGHLRLWDMQSGKLLSEVAA
                     HSLAVTSISLSRNGNSILTSGRDNLHNLFDTRTLEVLRTFRASENRVASNWSRSCISA
                     DDNYVASGSVDGSVHVWSVSNGNIVSTLKEHASSVLCCSWSGLGKPLATTDKNGVICI
                     WK"
     misc_feature    <75..>623
                     /gene="LOC139840383"
                     /note="Myosin tail; Region: Myosin_tail_1; pfam01576"
                     /db_xref="CDD:460256"
     misc_feature    261..527
                     /gene="LOC139840383"
                     /note="Coiled-coiled domain of autophagy-related 16
                     (Atg16) family proteins; Region: Atg16_CCD; cd22887"
                     /db_xref="CDD:439196"
     misc_feature    order(270..272,279..284,288..293,300..302,309..314,
                     321..326,330..335,342..347,354..356,363..368,375..377,
                     384..389,393..398,405..407,414..419,426..431,435..440,
                     447..452,456..461,468..473,477..482,489..491)
                     /gene="LOC139840383"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:439196"
     misc_feature    663..1541
                     /gene="LOC139840383"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    order(684..686,738..740,750..752,768..773,807..812,
                     864..866,876..878,894..899,933..938,990..992,1005..1007,
                     1023..1028,1065..1067,1113..1115,1128..1130,1146..1151,
                     1185..1190,1242..1244,1254..1256,1272..1277,1311..1316,
                     1377..1379,1392..1394,1410..1415,1449..1454,1506..1508,
                     1518..1520,1536..1541)
                     /gene="LOC139840383"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    696..809
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    825..935
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    948..1067
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1077..1184
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1200..1310
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1341..1448
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1464..1538
                     /gene="LOC139840383"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 tcatcatcat catgtcagaa gacgaaattg cgattcatca agcaataaaa catgcgttaa
       61 aatcgttacg aaaacggcat ttacttgaag aaggagctca tggaccggct tatgaagcaa
      121 tttctaaacc tattgccact cagggttcag aatggaagga aaaagcagaa actcttgaat
      181 tggagcttca gcagtgttat aaagctcaat ctcgattatc cgagcagctt gtggtggaag
      241 ttgctgagtc acgagctgca aagtctttag ttcaagaaaa ggaagcttta attcctacac
      301 ttgagaatga tctttcacaa gcaagggacg aatgttctcg gttggcagca ctcttagaag
      361 aaaagactaa agctgtagaa ttgcttatcg gtgagaataa gtctctcaaa tctcaatatg
      421 aagatatgcg aactagagcc attaacgcgg aagctgaaaa caagacattg attgaccgat
      481 ggatgctgca gaaaatgcag gatgctgaac gccttaatga ggccaatgct ttatatgaag
      541 acatgcttga taagctcaaa gccagtggtc tggaacaact tgctaggcaa caagtggacg
      601 gtgtggtccg ccaaagcgaa gaaggtgcag agtactacgt cgaaacaacc atgcccaaaa
      661 cctgcagtca cagaataaca gctcataatg gaggctgtgc ggctatagtt ttcgaaaaca
      721 gttctgctaa attggtcagc gggggccagg accatactgt taaaatgtgg gactcaatca
      781 ccggtcagtt aactagaacc tacaacggct gtttaggttc tgttcttgat ctcaccatta
      841 ctcatgataa caaaaatgta atagcagcaa gtagttcaaa taatctctat gtatgggatg
      901 cgaattcggg tcgggttaga catactctca cgggtcataa agataaagta tgtgctgttg
      961 atgtaagcag atcctcaagc cgccatgttg tcagttctgg ttatgaccgc accattaaag
     1021 tgtgggatct taataaaggc tattgtgtta acacgattat ttttccaagt aattgtaatg
     1081 cgttgtcttt tagcccagat gggcagacga tttgttcggg tcatgttgat gggcatttaa
     1141 gattatggga tatgcagtca gggaaattgt taagtgaagt tgctgcacat tctcttgctg
     1201 tgacgtctat ttcgttatct agaaacggta actcgatatt gacaagtgga agagataatt
     1261 tgcataattt gtttgataca aggacacttg aagtgttgag gacatttaga gctagtgaga
     1321 acagagttgc atctaattgg agcagatctt gtataagtgc tgatgacaat tatgttgctt
     1381 ctggatctgt tgatggttcg gttcatgttt ggtctgtttc gaatggtaat atagtcagca
     1441 cgcttaagga acatgcatct tcggtattgt gttgttcttg gagtggtctt ggaaaacctt
     1501 tagctacgac agacaaaaat ggtgtcattt gcatctggaa atgatgactt accatatatc
     1561 aacatgtaat tagtttgtac attacttgtt tcgtcagtca attcgttaca tatgtgcgtg
     1621 ttttgcttag ctgattgttt tgtttttcga ttgttagctg tagcatgaag ctttgtttga
     1681 aattcttact aaaattccac aggagtcttg gagtcttatg ccaacacatt gttacccgaa
     1741 attctttttc aa
//
LOCUS       XM_071830656            1307 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            RF2b-like (LOC139840384), mRNA.
ACCESSION   XM_071830656
VERSION     XM_071830656.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1307
                     /gene="LOC139840384"
                     /note="transcription factor RF2b-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840384"
     CDS             25..1065
                     /gene="LOC139840384"
                     /codon_start=1
                     /product="transcription factor RF2b-like"
                     /protein_id="XP_071686757.1"
                     /db_xref="GeneID:139840384"
                     /translation="MQDPNTKPPNTASSFPFRPSHHRRAHSEVNFRLPEDLDLASDFF
                     DAPSGSFEDIGSEDDLFSTYMDIEKLGSNVNHAPETVRINNASNTGSENGASDDNYAG
                     SACGEGSGDGEKTSMKPRHGYSNSVDGSSFFGKSIEAKKAMAPDKLAELWAVDPKRAK
                     RIMANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLALYQRDTTGLSSENTEL
                     KLRLQAMEQQAQLRDALNEALKQEVERLRVATGEIANCSDGYNLGMNHLQYNQANFFR
                     NKKQTEPPQYQIGHHSNMLKNHHYLLAAANTQQDPLGHFQGLDISNRGGGHHPIKSEG
                     VSISASESSGTF"
     misc_feature    496..645
                     /gene="LOC139840384"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; Region: bZIP_plant_RF2; cd14703"
                     /db_xref="CDD:269851"
     misc_feature    496..645
                     /gene="LOC139840384"
                     /note="coiled coil [structural motif]; Region: coiled
                     coil"
                     /db_xref="CDD:269851"
     misc_feature    <499..810
                     /gene="LOC139840384"
                     /note="Periplasmic chaperone for outer membrane proteins,
                     Skp family [Cell wall/membrane/envelope biogenesis,
                     Posttranslational modification, protein turnover,
                     chaperones]; Region: HlpA; COG2825"
                     /db_xref="CDD:442073"
     misc_feature    order(505..510,514..522,526..543,547..555)
                     /gene="LOC139840384"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     misc_feature    order(550..552,559..564,571..576,580..585,592..597,
                     601..606,613..618,622..627,634..639,643..645)
                     /gene="LOC139840384"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:269851"
ORIGIN      
        1 tcgcgcacac aactgaaaaa aagaatgcaa gatccaaaca ccaaaccgcc aaacacggcg
       61 tcctcatttc cgttcaggcc gtcacaccac cgtcgtgcac actcggaagt caacttccgg
      121 ttaccagaag acctagatct ggcatcagat ttcttcgatg caccttctgg aagcttcgaa
      181 gatattggat ctgaagacga tttgttttct acttacatgg acattgaaaa actcggatct
      241 aatgtgaatc acgctccgga aactgtacgg atcaacaatg cttctaatac cggcagtgaa
      301 aatggagctt ccgatgataa ttacgccggt agtgcttgtg gcgagggtag cggtgatggt
      361 gaaaagacta gtatgaaacc tagacacgga tatagtaatt cggtagatgg atcgagtttt
      421 tttgggaaaa gtattgaagc taagaaagca atggcgcctg ataaacttgc tgaactttgg
      481 gctgttgatc ccaaacgagc taagaggatt atggcaaatc gacaatctgc tgctcgttca
      541 aaggaaagga aagcccgcta tattaccgag ctcgagagaa aagttcagac cctacaaact
      601 gaagcaacaa ccctttctgc acaattggct ctctatcaga gggatactac tggtctttct
      661 tctgaaaaca cagaacttaa gctccgatta caagctatgg aacaacaagc gcagttacgt
      721 gatgctttga atgaggcgct taagcaggaa gtggaaagac tgagagtagc aacgggggaa
      781 atagccaact gttcagatgg ttacaatttg ggcatgaacc atcttcaata taatcaagcc
      841 aacttcttca gaaacaagaa acaaacagag ccgccacaat accaaatcgg ccaccactcc
      901 aacatgttaa aaaaccatca ctatcttctt gcagccgcca acacccaaca agatcctctt
      961 ggccatttcc aggggcttga tatcagtaac agaggtggtg gtcatcatcc tataaagtca
     1021 gaaggtgttt ctatatctgc aagtgaaagc agtggtacat tttaattata taaacgttgt
     1081 ccttttcgtg cacctcagta gtagctatac gtattgtctt ctaaatttaa ttgatttatt
     1141 tattttttac aaaattagtg atgtaattat ttaatattta attaactagt ccgtcaattg
     1201 tatcggatgt tgtttgtcgg ggtgatggtg gttttgtcgt gttttgtttg taattttatt
     1261 aactcgtgta acattatgaa ttttgaagtg tttatttgtt tactgaa
//
LOCUS       XM_071830657            1764 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALTERED PHOSPHATE
            STARVATION RESPONSE 1-like (LOC139840387), mRNA.
ACCESSION   XM_071830657
VERSION     XM_071830657.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1764
                     /gene="LOC139840387"
                     /note="protein ALTERED PHOSPHATE STARVATION RESPONSE
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139840387"
     CDS             1..1764
                     /gene="LOC139840387"
                     /codon_start=1
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE
                     1-like"
                     /protein_id="XP_071686758.1"
                     /db_xref="GeneID:139840387"
                     /translation="MGCSESKINDVQIMNQCKERKAFMKQSVAACNTFAACLFAYAEA
                     LKNTGSAFADYAKCATQFSEDVSLESPHHPKLRPCEKDGVWDFFYSFMDYDLAQVDDK
                     NSTVKKTGEDMDNVNLLQVFTKLDDGFLKASKSVHKIWKILDGNKLNYHSNHAHNQGD
                     HISHSARIMRVITWNESFKGRQIAIDAMDDFASRGKETHVTLLEKILAWEMKLCDQVK
                     VGEMKKREYQKKVASLDKLRKRGASNDLLERTQDVVTHMQTRYIVDLQSIESTVSEIN
                     CLRDEQLYPKLVRLIEKMSFMWKNMRQQHQHQFEIVQELKSFKFSHKETSERNLINTQ
                     RLYLHVRIWGSEFEKLITRQKEYIKSLNNWLKLDLISIDSNSIDKKLLAKQTQNPKIQ
                     PLLSNWLENLEKLTEQGAINTIIKFALAVETNVDYQLKAMKLKEKCEETRMEITKRSR
                     KFEEWCDKQITKGKSSDEVDIDVMNDMEVVAEQEVVVAALKRRLVEEEEDAYRRWSGQ
                     VMDMRTGLPEVFMSMMEFACVCSNMYVALVINVCKNKKLKHIIDYRRPDNNIYFLGDH
                     FIHLLQLPKENGTVLYFYVIA"
     misc_feature    1..168
                     /gene="LOC139840387"
                     /note="Protein of unknown function (DUF630); Region:
                     DUF630; pfam04783"
                     /db_xref="CDD:461426"
     misc_feature    352..1254
                     /gene="LOC139840387"
                     /note="Protein of unknown function (DUF632); Region:
                     DUF632; pfam04782"
                     /db_xref="CDD:461425"
ORIGIN      
        1 atgggttgtt cggaatcaaa gatcaacgat gtacaaatta tgaatcaatg caaagaaaga
       61 aaagctttca tgaaacagtc agtcgctgct tgtaacacct ttgctgcctg cctttttgcg
      121 tatgccgagg ccctcaagaa cactggatct gcgtttgcag attacgctaa gtgtgcgact
      181 caattttctg aggacgtctc tttggaatcg ccacatcatc ctaagttacg tccgtgtgag
      241 aaagatgggg tatgggactt tttttattcg tttatggatt acgacttggc tcaagttgat
      301 gataaaaata gtacagttaa aaaaactggt gaagacatgg ataatgtgaa tttgttgcaa
      361 gtatttacaa agcttgatga tggttttctt aaagcttcaa agagtgttca taaaatttgg
      421 aagattcttg atggcaataa gctaaactac cactcgaatc atgcacataa tcaaggagac
      481 catatcagtc attctgcaag gatcatgcgg gtcattacat ggaatgagtc gtttaaagga
      541 cgacaaattg ctattgatgc gatggacgat tttgcgtcta ggggaaaaga aactcatgtg
      601 acactactag agaagatcct ggcatgggag atgaagctat gtgatcaagt gaaggttggt
      661 gaaatgaaga aacgtgaata ccagaaaaag gtcgcatcac tagataaact tagaaaacga
      721 ggcgctagta atgatttatt agagcgaaca caagacgtag taactcatat gcaaacaaga
      781 tacattgtag atttgcaatc cattgaatcg accgtttcag aaatcaactg ccttcgtgat
      841 gagcaattgt atccaaaact tgttcggctc attgaaaaga tgagctttat gtggaagaac
      901 atgaggcaac aacatcaaca ccaattcgaa atcgtgcaag aattaaaatc tttcaaattc
      961 tcacacaagg aaacaagcga gcgcaattta ataaacacgc aaagacttta tctccacgtg
     1021 agaatttggg gttctgaatt cgaaaaactg attactcgcc aaaaagaata catcaaatcg
     1081 ctcaacaatt ggctaaaact agatctaatc tccatagata gcaactcaat cgacaaaaaa
     1141 ttacttgcga aacaaactca aaatcctaag atccaaccgt tgttgagtaa ttggctagaa
     1201 aacctcgaga agcttacaga acaaggggca ataaacacga tcatcaaatt tgcattagca
     1261 gtggaaacaa atgttgatta tcaattaaaa gcgatgaaat tgaaggagaa atgtgaggaa
     1321 acaaggatgg aaataacaaa gaggtctcga aaatttgaag aatggtgcga taaacaaata
     1381 acaaagggga aatcaagtga cgaagtggat atcgatgtaa tgaatgatat ggaggttgtt
     1441 gcagaacaag aggtcgttgt ggctgcatta aagcggcggt tggtggagga ggaggaggat
     1501 gcgtatcgtc ggtggtccgg tcaggtgatg gatatgagga ccggattgcc agaagttttt
     1561 atgtcgatga tggaatttgc ttgtgtttgt tcaaatatgt atgtagcttt agttattaac
     1621 gtttgcaaga ataaaaagct aaagcacatt atagattaca gaaggcctga caacaatata
     1681 tattttctag gagatcactt tattcatctg cttcaactcc caaaagaaaa tgggacagtt
     1741 ctatacttct atgttattgc ttag
//
LOCUS       XM_071830659            1287 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139840388), mRNA.
ACCESSION   XM_071830659
VERSION     XM_071830659.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1287
                     /gene="LOC139840388"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840388"
     CDS             1..1287
                     /gene="LOC139840388"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071686760.1"
                     /db_xref="GeneID:139840388"
                     /translation="MSSTSSSSEEFLMQVLDIINSEALESENEAESSHTRRYIEREHE
                     AAHVRLMTDYFVQGCKYSDDNFKRRFRMRRRVFLPIMEDILNYHKVPLPEYFRYFHLR
                     FDARGKLSISTYLKITAALRQLAYGDTPDLFDEYLQMSERTSRESLMHFCKCIIDLYK
                     DEYMREPTTEDIKRLYEAHEDIHGLPGMMGSIDCMHWVWGRCPVAWKCQFTRGDHKVP
                     TIMLEAAASYDNWIWHAFFGVAGSNNDLNVLNASNLFNSMLNEETEDILFTVNGVEYK
                     RGYYLADGIYPGWASFVKAFSSANDEKRKCFSKKQAAARKDVERTFGILQGRWHMLQQ
                     PARAYSVNVMKQMMYTCIILHNIIVEHNGFALTENDWVYEPVHNMQTTWIERCETHRR
                     RMKELRDREVHEGLRSNLVEHVWANRETSESETESD"
     misc_feature    481..1089
                     /gene="LOC139840388"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcttcaa catcatcgtc tagcgaagag tttttgatgc aagtgctcga tataatcaat
       61 agcgaggcgt tagaaagtga aaatgaagcg gaaagttcac acacacgtcg ttatatagaa
      121 cgtgaacatg aagccgcaca tgtacgtctt atgaccgact attttgttca aggttgcaaa
      181 tactccgacg ataattttaa aaggaggttt cgaatgcggc gtcgcgtatt tctcccaatt
      241 atggaagata ttctcaacta ccacaaagtt ccgctaccgg aatactttag gtattttcat
      301 ttacgatttg atgcgcgcgg caagttgagt attagtacat acttaaaaat aactgctgct
      361 ctacgacaat tagcttatgg tgatacaccc gatctttttg acgagtactt gcaaatgtcg
      421 gaacgaacat ctcgtgaatc attaatgcac ttttgtaagt gtattattga tttatataaa
      481 gatgaatata tgcgagagcc taccacggaa gatatcaaaa gattgtatga agctcacgaa
      541 gatattcacg gtttacctgg aatgatggga agcatagatt gtatgcattg ggtatgggga
      601 agatgtcccg ttgcatggaa atgtcaattt actcgaggcg atcacaaagt tccaactatt
      661 atgctagaag ctgcagcctc atatgataac tggatttggc atgctttctt tggggttgcg
      721 ggttcaaaca acgacttaaa cgtcttgaac gctagtaatc tcttcaactc aatgcttaat
      781 gaagaaacag aagatattct ttttactgta aatggggttg agtacaaaag aggatattat
      841 ctagcggacg gtatatatcc cgggtgggca tcgtttgtga aggcgttttc aagtgcaaac
      901 gatgaaaaac gtaagtgctt ttcgaagaaa caagcagcgg cacgcaagga tgttgagagg
      961 acttttggta ttttacaggg gcgttggcat atgctacaac aaccagcaag ggcatatagc
     1021 gtcaatgtaa tgaaacaaat gatgtatacg tgcattatct tacacaacat aattgtcgaa
     1081 cataatggtt ttgctctaac cgaaaatgat tgggtttacg aacccgttca taatatgcaa
     1141 acaacttgga tcgagaggtg cgaaactcac aggaggagga tgaaagaatt acgagatagg
     1201 gaagtgcatg agggcctacg atcgaatttg gttgaacatg tatgggctaa tcgtgagacg
     1261 tcggagtcag agacggagtc ggattaa
//
LOCUS       XM_071830660             924 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 11-like (LOC139840389), mRNA.
ACCESSION   XM_071830660
VERSION     XM_071830660.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..924
                     /gene="LOC139840389"
                     /note="protein FAR1-RELATED SEQUENCE 11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840389"
     CDS             1..924
                     /gene="LOC139840389"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 11-like"
                     /protein_id="XP_071686761.1"
                     /db_xref="GeneID:139840389"
                     /translation="MRRAPQTILTDQDQWMTNAIAKEMPLAKHAFCIRHITTKFSSWF
                     MSVLRSEYSSWCSEFYTLYKLDTVEEFEKHWPLIIEKYNLSNNKHVVGLYKIKSFWVP
                     AYLRDFFFGGMTTTGRSEIEDVQQKQIHDTMLQIYRGSYLRSLSPLEEQGYRFLTPFY
                     FKKFQEQFGLAMQYSVEGIQYSSHEEKTVNFIVKHQTATKLHNVIWDVPSNYWHPRWG
                     RKDTQADEICSSTQEVIVVDSNATFNDEAIVDAIDLVQCPIKSKTKGRPKQKRMKSEK
                     ELVKQRRCGFCRGFGHNINTCKERQVDDLND"
     misc_feature    <7..>609
                     /gene="LOC139840389"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgagaaggg caccacaaac aattttgact gatcaagatc aatggatgac gaacgcaatt
       61 gcaaaagaaa tgcctttggc taagcatgca ttttgtatac ggcatatcac cacaaagttt
      121 agcagttggt ttatgtcggt gttaagaagt gagtattcaa gttggtgttc agaattttat
      181 actttatata agttagacac ggttgaagaa ttcgagaaac actggccact gattattgaa
      241 aaatataatc tttccaataa taagcatgtt gtcggcttgt ataagataaa gtcattttgg
      301 gtacccgctt atcttcgtga tttctttttt ggtggtatga caactactgg gagatcagaa
      361 attgaagatg ttcagcaaaa acaaatacat gataccatgc tccagatata tagggggtcg
      421 tatttgagat cactttcacc attggaagaa caaggttatc gttttttaac tccattttat
      481 tttaaaaagt ttcaagagca gtttggactc gcaatgcaat attcagttga aggaattcaa
      541 tattcgagtc atgaagaaaa aaccgttaac tttattgtca aacaccagac agctacaaaa
      601 ttgcataatg tgatttggga tgttccttcc aattattggc atccacgatg gggtcgcaaa
      661 gatactcaag ctgatgaaat atgttcatca actcaagaag ttattgttgt tgattcaaac
      721 gctactttca atgatgaggc tatagttgat gcgattgact tggttcagtg ccctattaaa
      781 tcaaaaacca aaggacgacc caaacaaaag aggatgaaaa gtgaaaagga attggtaaaa
      841 caaagacgtt gtgggttttg taggggtttt ggtcacaata ttaacacatg caaggaaaga
      901 caagttgatg atttgaacga ttaa
//
LOCUS       XM_071830661            1299 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840390), mRNA.
ACCESSION   XM_071830661
VERSION     XM_071830661.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1299
                     /gene="LOC139840390"
                     /note="uncharacterized LOC139840390; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840390"
     CDS             1..1299
                     /gene="LOC139840390"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686762.1"
                     /db_xref="GeneID:139840390"
                     /translation="MKRKGRESTGSLMLKNHLAQSSVVQQRALQILEADSSKLDESTK
                     FTVGAAVGELNRMVDVGLMTEAGDLWVNMNSEISKKLHKRHCFNLLLGSCYTNDLAAT
                     YYYKYIYKEPCMTSSLTGEAWVMEVLNGHPIRCVNAFRMHPDLFRKLCGELETNYGLQ
                     SSDKMSTFEMVGIFMYTLALGLSNRDVMERFQRSGETISRAFHEVLNAIIGRDKGFQG
                     LARDIIRPKDPTFQLIPPQIINDKRYMPYFKNCIGCIDGTHIRACITESQQLPYIGRK
                     GVPTFNVMATISRQKWNLVPYPKTRYHQFQFQRESPNNMQEAFNRSHSSLRSYIERSF
                     GILKKRCRILREMPTFSVQTQIDVITATFALHNYIRTNSQEDILFAIIDQHPNYIPRD
                     ELIDVSNRDRSAEGLYEGRSNEMKHVRNDIATLIWNARRK"
     misc_feature    <868..1101
                     /gene="LOC139840390"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 atgaaacgta aaggaagaga atcaacggga tctttaatgc ttaagaacca tttagcgcaa
       61 agtagtgtgg tgcaacaacg tgctctacag atattagaag cagattcttc caaacttgat
      121 gaaagtacta agtttactgt tggagctgct gtaggtgagc ttaaccggat ggttgatgta
      181 ggattaatga cagaagcagg ggatttgtgg gttaatatga atagtgagat aagcaagaag
      241 ctacacaaac ggcattgttt taatttgttg ttgggttcat gctatactaa tgatcttgct
      301 gcgacatatt attataagta tatatacaag gaaccgtgca tgacatcatc tctaacaggc
      361 gaggcttggg tgatggaagt tttaaatggt catccaatac gatgtgtaaa tgcatttaga
      421 atgcatccgg atttgtttag gaaattatgt ggagaacttg aaacaaacta tggattgcag
      481 tcatctgata aaatgtcaac atttgagatg gtggggatat ttatgtatac attggcattg
      541 gggttatcta atagagatgt tatggagcgt tttcagcgtt ctggagagac tattagtcga
      601 gcatttcatg aggttctaaa tgcaattatt ggtagagata aaggttttca aggtctagca
      661 cgcgacatta taagaccaaa agatccaact tttcaactaa taccacctca aatcataaac
      721 gacaaaagat atatgcctta tttcaagaat tgcatcggat gtatcgatgg tacacatata
      781 agggcctgca tcacagagag tcaacaactg ccttatattg gtagaaaagg agtacctact
      841 ttcaatgtaa tggcaacgat atccagacag aaatggaacc ttgttccata tcccaagaca
      901 agataccatc aattccaatt tcaaagggag tccccaaata atatgcaaga agcattcaac
      961 cgttcacatt catctctacg aagttatatt gagaggtcat tcggaatttt gaagaaacga
     1021 tgtcgcatac ttcgtgaaat gccaacgttt agtgtgcaaa cacaaattga tgttataacg
     1081 gctacatttg cgttgcataa ctacatccgt actaacagcc aagaagatat tttgtttgca
     1141 ataatcgatc agcatccaaa ttacatacca cgagatgagc ttattgatgt tagtaaccgt
     1201 gacagaagcg ccgaaggact atatgaagga agaagtaatg agatgaaaca tgttcgtaac
     1261 gatattgcta ctttaatatg gaatgctcgt cgaaaataa
//
LOCUS       XM_071830662             954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840391), mRNA.
ACCESSION   XM_071830662
VERSION     XM_071830662.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..954
                     /gene="LOC139840391"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840391"
     CDS             1..954
                     /gene="LOC139840391"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686763.1"
                     /db_xref="GeneID:139840391"
                     /translation="MSAYCRNLYMALNRPLELGFSSLQVMPNELAFNKVGLLQQIISS
                     LHKEFVMTDLGQLNYFLGIHATRTASSIFLSQKQYAIEIIEWAGMSTCQPCRTPIEPG
                     AKLTSHGPTVKDPTNYRSITGALQYLTFTRSDISYDPTTEHGLQLYTSSPSTLVAYSD
                     ADWEGCPNTRRCTSGYCVFLGSNLLSWSSKRQLMPSRSSAKSEYRGVANAVAETCWIR
                     NLLRELHCPLTSATLVYCDNVSSVYLSTNPVQHQQTKHIEIDIHFVHDLVAQGQVRVL
                     HVPSRYQFADIFTKGLPFTLFDEFRSSLCVRRTSAPTAGGC"
     misc_feature    <103..300
                     /gene="LOC139840391"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    466..879
                     /gene="LOC139840391"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(478..489,592..600,607..609,709..711,787..789,
                     868..870)
                     /gene="LOC139840391"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtctgctt attgcagaaa tctctatatg gccttaaaca ggcccctcga gcttggtttt
       61 agctctttac aggttatgcc caacgaattg gctttcaaca aagttgggtt acttcagcag
      121 attatctcct ccttgcataa ggaatttgtt atgactgatt tgggccaatt gaactacttt
      181 ctcgggattc acgctactcg tactgcttct agtatctttc tttcacagaa acagtatgcc
      241 atcgagatta ttgagtgggc tggtatgtcc acttgccagc catgccggac cccgattgaa
      301 ccgggtgcca agcttaccag tcacggcccc actgtcaagg atccgactaa ctatcggagc
      361 attactggcg ctctacagta tctcacgttc actcgatcgg atatttcata cgatcccacc
      421 actgagcatg gtctccagtt atacacatcg tctccctcca cattggttgc ttactctgac
      481 gctgattggg aaggttgccc caataccaga cgatgtacat caggctactg tgtttttctc
      541 ggcagcaacc tcctatcctg gtcctctaag cggcaactca tgccctctcg ctctagtgct
      601 aaatcggagt atcgtggagt tgctaatgct gttgccgaga cttgttggat tcgtaatctt
      661 ctgcgcgagc tacactgtcc tctcacatca gctacgttag tatattgtga taatgttagc
      721 tcggtctatc tctccaccaa tcctgtacag catcagcaga ctaagcacat tgagattgat
      781 attcattttg ttcatgatct cgttgctcag ggacaagtac gggtcttaca tgttccgtcc
      841 agatatcagt ttgccgacat cttcactaag gggcttccat ttacactatt tgatgagttt
      901 agatccagtt tatgcgttcg acgaacttcc gctccaactg cggggggatg ttag
//
LOCUS       XR_011757392             405 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139840392), ncRNA.
ACCESSION   XR_011757392
VERSION     XR_011757392.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..405
                     /gene="LOC139840392"
                     /note="uncharacterized LOC139840392; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840392"
     ncRNA           1..405
                     /ncRNA_class="lncRNA"
                     /gene="LOC139840392"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139840392"
ORIGIN      
        1 gattttatct tatttgcagg tactttatct attgttctct catttacttt tttgtttcca
       61 gatggcaact aattaaaagg atcaaagaag ttaacaaggg aagatcgtca ttaagttgga
      121 aattaaaaac ttgaactttg gttgagcacc agtggtggat cgatatcaga taagtctaca
      181 tcaacgaagt attgtgatat ttcttcaata tataatggta tgttgaatta tgttaaaatt
      241 ttgtattaca gttacagata ataaaatcca tatacaccgt aaacaccata ttgtctaacg
      301 aagccaggaa tatcacacat tacaccatta cattgtagca ggaaaaccac cgtatttgga
      361 agctcagcaa cccactacca cctaaagccc gatgtggagg agttt
//
LOCUS       XM_071830663             969 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides delta-9 acyl-lipid
            desaturase 1-like (LOC139840393), mRNA.
ACCESSION   XM_071830663
VERSION     XM_071830663.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..969
                     /gene="LOC139840393"
                     /note="delta-9 acyl-lipid desaturase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139840393"
     CDS             1..969
                     /gene="LOC139840393"
                     /codon_start=1
                     /product="delta-9 acyl-lipid desaturase 1-like"
                     /protein_id="XP_071686764.1"
                     /db_xref="GeneID:139840393"
                     /translation="MVKLISVFEGVQNDTEYYGKILLSDVKVTRKRNLFTGRNWRTLD
                     IKMAIGILFIHLLALCAPFYFTWGAFWAAFIRYMVCGILGVTLSYHRNLAHHSLKLPK
                     WLEYTFAYFGVLALQRDPIFWVSMHRYHHQYVDSDKDPHSPTFGFWFSHMGWLFDSGY
                     LLEKYQERKNVEDLKNQAFYRFIKRTYMFHIFAFATTIYSLGGFPYLMWILGVSTTWG
                     YHVTFLVNSACHIWGNQAWKTGDLSKNNWLVALITFGEGWHNNHHAFEYSARHGLEWW
                     QIDFCWYMIRFLEVAGLATNVKLPTANHKIKKSFASSKKYRSVTQT"
     misc_feature    82..933
                     /gene="LOC139840393"
                     /note="The membrane fatty acid desaturase
                     (Membrane_FADS)-like CD includes membrane FADSs, alkane
                     hydroxylases, beta carotene ketolases (CrtW-like),
                     hydroxylases (CrtR-like), and other related proteins. They
                     are present in all groups of organisms with the...;
                     Region: Membrane-FADS-like; cl00615"
                     /db_xref="CDD:445012"
     misc_feature    order(268..270,283..285,379..381,388..393,775..777,
                     784..789)
                     /gene="LOC139840393"
                     /note="Di-iron ligands [ion binding]; other site"
                     /db_xref="CDD:239582"
ORIGIN      
        1 atggtcaaat tgatctccgt ttttgaaggt gttcaaaacg atacagaata ctacggcaaa
       61 atactactct ccgatgtgaa ggttacgaga aaaagaaacc tgtttacggg tcgtaattgg
      121 aggactcttg acatcaagat ggctataggg atcttattta ttcatttact tgcactttgt
      181 gcaccatttt attttacttg gggtgcattt tgggctgcat ttataaggta catggtgtgt
      241 gggatcttag gtgtaaccct ctcatatcat cgtaacctag cgcaccatag tctcaagcta
      301 ccaaagtggc tcgaatacac attcgcttat tttggagtct tggccttgca gagggatcca
      361 atattttggg tgagcatgca tagatatcac catcaatacg ttgactccga caaagatcca
      421 cactctccga cattcggatt ttggtttagt catatgggtt ggttgtttga tagtggctac
      481 cttcttgaaa agtatcaaga acgtaaaaat gtggaggact taaagaatca ggcattctat
      541 aggtttatta aaagaaccta tatgttccat atatttgctt ttgcaaccac catttactct
      601 cttggtggat ttccctacct tatgtggatt ctgggagttt caactacatg gggatatcat
      661 gtgacttttt tagtcaactc agcttgtcat atatggggaa atcaagcttg gaaaaccggt
      721 gatctctcca agaacaattg gctagtagca ctgatcactt ttggagaagg ttggcataat
      781 aatcaccatg catttgaata ttcagctcga catgggttag aatggtggca aatcgacttt
      841 tgttggtaca tgataaggtt tcttgaagta gcagggcttg ccaccaacgt taaattaccg
      901 actgcgaatc acaaaattaa gaagtcattt gcttcttcta aaaagtaccg aagtgttacc
      961 caaacatga
//
LOCUS       XM_071830664            1449 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840394), mRNA.
ACCESSION   XM_071830664
VERSION     XM_071830664.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1449
                     /gene="LOC139840394"
                     /note="uncharacterized LOC139840394; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840394"
     CDS             1..1449
                     /gene="LOC139840394"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686765.1"
                     /db_xref="GeneID:139840394"
                     /translation="MTLFYNILTFIILVPTCLSFTVIMSDSGVPSALVDAPQTGFSVN
                     NNGAKTDHAEQQAVYDIMKATGNEWATDIRDVCRGRWHGIECMPDKNNIFHVVSLSFG
                     ALSDDTAFPTCDPTRSYISPSITKLPHLRTLFFYQCFTGKPQRIPSFLGLIGPTLQTL
                     VLRENGHVGPIPNELGNLTGLRVLDFHKNNLDGSIPVSFNRFSGLKSLDLSCNKLTGS
                     IPSFIFPQLTILDLNQNHLTGSIPTTIGKCNSLMKIDLSRNRLSGQMPDSISELTSVI
                     LMDLSYNSLSGPIPNAIKNLDSLQTLILNGNSFSSMIPIAAFDGLNNLMILILSGTDL
                     HGPIPESIAQLPNLRILHLDRNRLNGSIPTNFRNLNGLSELRLNDNELIGPIPFGKEM
                     IWKMRRKLKLQNNLGLCYDGRNGFGGDLGLLSDSGIDHCDMPKPGPAQVVQHFTITNK
                     GEPLQATKSLATRGISYQGGLIQLLIVVVLLL"
     misc_feature    223..>1260
                     /gene="LOC139840394"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    469..540
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    541..612
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    613..678
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    679..750
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    751..822
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    823..894
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    895..969
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    970..1041
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1042..1107
                     /gene="LOC139840394"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 atgactctct tttataatat cctaactttc ataatattag ttccaacatg tctctcgttc
       61 accgttatta tgtccgattc gggtgtcccg tctgccctcg tagacgcccc tcaaacgggc
      121 ttctcagtca acaacaacgg tgctaaaacc gaccatgctg agcaacaagc agtttatgac
      181 atcatgaaag ctacaggtaa cgaatgggcc actgatatac gggatgtatg tcgaggtcgt
      241 tggcatggga tcgagtgcat gcccgataaa aataacatct ttcatgttgt ttcgttatct
      301 ttcggcgctt tatccgatga cacggctttt cctacatgtg atccgacccg atcctacatt
      361 tcaccttcca tcactaaatt accgcacctc aggactttgt ttttttacca gtgttttact
      421 ggaaagcctc agcgtattcc ttcctttttg ggcctgattg ggcctacatt gcaaactcta
      481 gttctaaggg aaaatggaca tgtgggccca attcctaatg aacttggtaa tctcaccggt
      541 ttaagagttc ttgattttca taaaaacaat ctggacggtt caattccggt ttctttcaac
      601 cggttctccg gtctaaagtc gttagatttg agttgtaaca aactaaccgg ttcgattcca
      661 agtttcattt ttcctcagct aactattcta gacctcaacc aaaaccacct caccggttcg
      721 attcctacca caatcggaaa atgtaattcc ctcatgaaga tcgatttaag tcgtaaccgg
      781 ctctcgggtc aaatgcccga ttctatcagc gagttaacga gtgtcatttt gatggattta
      841 agctacaata gcctctcggg cccaatccca aatgccataa aaaacttaga ttccctccaa
      901 actctaatcc tcaatgggaa ctccttcagt tcaatgatcc ccatcgccgc atttgatggg
      961 ctaaacaact taatgatctt aattctctct ggcaccgatt tacatgggcc gatacccgaa
     1021 tcaatagccc agttaccaaa cttacgtatc ctccatctcg atagaaaccg tttaaatggg
     1081 tcgattccaa caaactttcg gaacctaaac gggttaagtg aattgaggct gaatgataat
     1141 gagttgatcg ggccaattcc tttcgggaaa gaaatgattt ggaaaatgag aagaaaattg
     1201 aaacttcaaa ataatttagg gttgtgttat gatggtcgaa atgggttcgg gggagatttg
     1261 ggtttgttat cggattcagg tatcgatcat tgcgacatgc caaaaccggg tccggctcaa
     1321 gtggttcaac attttaccat aacaaataaa ggtgaaccgc ttcaggctac taaatcttta
     1381 gcaaccaggg gaattagtta tcaggggggt ttaattcagt tattaattgt agtggtgtta
     1441 ttattatag
//
LOCUS       XM_071830665             531 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840395), mRNA.
ACCESSION   XM_071830665
VERSION     XM_071830665.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..531
                     /gene="LOC139840395"
                     /note="uncharacterized LOC139840395; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840395"
     CDS             1..531
                     /gene="LOC139840395"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686766.1"
                     /db_xref="GeneID:139840395"
                     /translation="MISSSDRNKSGSSSILRHNFQRSISPSGNPYVRFSTDQNRHVSP
                     NRSVATSSTINLNSNKNNNTDKKWSYGSKKTCLCSPTTHPGSFRCSLHKNLNSNTKNL
                     KGNRENGDVSYRSHKLYARRSAMVNSLVRIGTVEGELMKRALAALIRPSSHQQRRRND
                     FQPKPSRLSIMSKADC"
ORIGIN      
        1 atgatatctt catcagatag aaacaaatct ggatcatcat cgatcctccg acacaatttt
       61 caacgatcaa tttcaccttc cggcaaccct tacgtccgat tctcaaccga tcaaaaccgt
      121 catgtgtctc caaaccgctc cgttgccacg tcatcaacta taaacttgaa tagtaacaaa
      181 aacaacaata ctgataagaa gtggagttac gggtcgaaga aaacgtgttt atgttcgcct
      241 acaacgcatc ctggatcgtt tagatgtagt ttacataaaa atttaaattc aaatacgaag
      301 aatttgaaag gaaaccgtga gaatggtgac gtgtcatatc gatcgcataa attgtatgct
      361 agaagatctg cgatggtgaa ttcgcttgta cggattggga ctgttgaagg tgagcttatg
      421 aaacgtgcat tagcggcttt aattcgacca tcatcgcatc aacagagacg acggaacgat
      481 tttcagccga aaccaagccg gctttcgatt atgtctaagg ctgattgtta g
//
LOCUS       XM_071830666             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840396), mRNA.
ACCESSION   XM_071830666
VERSION     XM_071830666.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139840396"
                     /note="uncharacterized LOC139840396; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840396"
     CDS             1..567
                     /gene="LOC139840396"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686767.1"
                     /db_xref="GeneID:139840396"
                     /translation="MSRIDRGLINSHWARLWPEAILQMAQPDRSDNKPIVWGKKLICW
                     GPRPFRFNNSWLSKQGFLDFCEAKWYNYDTVRWAAFILGKKLRLLKSDLKMWKSTQQD
                     PNCNNLKVCVAEIKRLKDWYKIHDLTDHELSELANLKKLKKQVMIRIESKHMLQSCFR
                     WLKLGDKNSKFLHLVSRIRQQSNYIAGM"
ORIGIN      
        1 atgtctcgta ttgatagagg tttaatcaac tctcattggg ctcgtttgtg gcctgaagca
       61 attttacaaa tggcccaacc ggataggtca gacaacaagc ctattgtgtg gggtaaaaaa
      121 cttatttgtt ggggcccaag accatttcgg ttcaataatt catggctatc aaaacaaggg
      181 ttcttagatt tttgtgaagc aaagtggtat aattatgata ctgtgcggtg ggctgctttt
      241 attctaggca aaaagttgcg gcttctaaaa tccgatttga aaatgtggaa gtctacacaa
      301 caagatccga attgcaataa tttaaaggta tgcgtagccg agatcaagag acttaaagat
      361 tggtataaaa ttcatgattt aactgatcac gaattaagtg aattagccaa tctcaaaaag
      421 ttaaagaaac aagttatgat acgcatcgaa tcaaaacaca tgctccaatc ttgttttcgt
      481 tggttaaaat taggcgataa aaactcaaaa ttcctccacc tggtttcacg aatcagacaa
      541 caatcgaatt atattgcagg gatgtaa
//
LOCUS       XM_071830667            1056 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840397), mRNA.
ACCESSION   XM_071830667
VERSION     XM_071830667.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1056
                     /gene="LOC139840397"
                     /note="uncharacterized LOC139840397; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840397"
     CDS             1..1056
                     /gene="LOC139840397"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686768.1"
                     /db_xref="GeneID:139840397"
                     /translation="MKAKKSLAKGCDSFLAYVIDAKKEKKSVSDIPIVSEFPEVFPDE
                     FPGLPPVREVEYKIELLPGSTPVAKAPYRLAPFEIRDMMSQIQELLDRGFIRPSSSPW
                     ALPEGTEDFVVYCDALLAGLGCVLIQREKVIAYASRQLKTHERNYPTHDLELAVVVFA
                     LKLWRLYLYDTHCVICTDHKRKENVIADALSRKKSTDNVKFMRIKIVSDLIDRLKIAQ
                     LEALKDEHLKSEILVKRKVDLINDSRGLKTLNRDSRFVSNFWQSFQENLGTRVNLSTV
                     YHPQTDGQSECTIQTLEDMLRACVLEYGGSWDSHLPLIEFAYNNSYHSSIGMPPYEML
                     YGRRCRMPTYWLEAGEK"
     misc_feature    334..579
                     /gene="LOC139840397"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty3; cd09274"
                     /db_xref="CDD:260006"
     misc_feature    order(346..357,442..450,457..459,532..534,574..576)
                     /gene="LOC139840397"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260006"
ORIGIN      
        1 atgaaagcta agaaatcgtt agccaagggg tgtgattcgt ttctagcata cgtgatcgac
       61 gcaaagaaag agaagaaatc cgtgtctgat atcccgatag tgtccgaatt cccagaagtc
      121 ttcccagatg aatttccggg tttaccgcca gttagggaag tagaatataa aatcgagttg
      181 ttgccaggat ccacaccagt tgctaaagct ccgtatcgat tagcaccgtt cgagattcgt
      241 gatatgatgt cgcaaattca ggagttgcta gatcgtgggt ttattcggcc aagttcttca
      301 ccatgggcat tacctgaggg tacagaagat tttgttgtgt attgtgatgc gttattagcc
      361 ggattgggtt gtgtgttaat tcagagagag aaagtgattg catatgcctc aagacagttg
      421 aaaactcatg agagaaatta tccgacacat gatctagagt tagctgtggt tgtatttgca
      481 ttgaaattat ggaggcttta tctttacgac actcattgtg tgatttgtac tgaccacaag
      541 agaaaggaaa atgtcattgc agatgctttg agtcgaaaaa aatccacaga caatgtaaaa
      601 ttcatgcgaa ttaagattgt gtcagacttg attgatcgat taaagatagc acaattagaa
      661 gccttgaagg atgaacattt gaaatctgag atattagtaa agcgaaaagt agatttaatt
      721 aatgattctc gtggattaaa aactttgaat agggattcaa ggttcgtgtc taatttttgg
      781 cagagttttc aggagaattt gggtactcga gttaatctca gcacagtgta tcatcctcaa
      841 acagacggtc aaagtgaatg tactattcag acgttagagg atatgttaag agcttgtgta
      901 ttagaatatg gaggatcgtg ggattctcat ctacctttga ttgaatttgc ttacaacaac
      961 tcgtatcact ctagtatagg catgccgccc tatgaaatgc tctatggtcg tcgctgtaga
     1021 atgccgactt attggttaga agctggagag aaatag
//
LOCUS       XM_071830668            1550 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840398), transcript variant X1, mRNA.
ACCESSION   XM_071830668
VERSION     XM_071830668.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1550
                     /gene="LOC139840398"
                     /note="uncharacterized LOC139840398; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840398"
     CDS             665..1009
                     /gene="LOC139840398"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686769.1"
                     /db_xref="GeneID:139840398"
                     /translation="MKIIRKSCLMVVLHLTCGVMHKTVFVIAVELSPVQSVLYKRFLD
                     VHGLTQEKASIEKSNKSFSASYQASIGSGTDRVKTMHSFREKLHAHKMQSEYLKTVAA
                     KQNHTTQIQRFA"
ORIGIN      
        1 atatgcaatt acatttggcc aaattttgaa atcaattaac cctaaatcga tttcttcacg
       61 tagtccacag catcgtacgc tcttcctcac ttctcaaact ctaatttcta atcaacatgt
      121 aacaacacga tttgacctat gtttatcccg attcacgatt tctaattcat ctgatgtatc
      181 tattgattat catctgcata tagtttttcg attacaacga atcattttcg tgagaaatcc
      241 gtgaaggatt caccttgatt ttgttgtaca tctgtctaaa tcgctatttc tgtcatcgcc
      301 aaattcatgg gatctgataa caatatccag attaggtttg aaatctattt gtggttaccg
      361 gcgtctaagg gttctgcgac actgagtatt tgagaaaggc aagatagaaa cagattgtaa
      421 tacgattctt caaaaggttt gtgattagtt gtttccgtag atgatgttaa tcatgaattt
      481 gttaacgttt aagaacgttc ttctctgcat aatgatgcta aattatgaat ctgcataatc
      541 tttgatggtg ctgaattagg agaatatgct aagaagaaaa ttgctattga aaatgaacgt
      601 caagaacgac ttaagttact gaaagctgaa cgtctgaagt cactgacatc aatgaagaca
      661 aaatatgaaa attataagga aatcgtgtct catggtggta ttacatttga catgtggggt
      721 gatgcacaaa actgtttttg taattgctgt ggagctttct cctgtacaaa gcgtgctata
      781 caaaagattt cttgatgtac atggactcac tcaagaaaag gcttctattg agaaaagcaa
      841 caagagtttt tccgcaagtt atcaagctag cattggctca ggaactgatc gtgttaaaac
      901 aatgcattca ttcagagaga agcttcatgc tcacaaaatg cagtctgagt atttaaaaac
      961 tgttgctgca aaacagaacc atacaacaca aatccaacgc ttcgcctaaa acgaacccga
     1021 tacaaaaatg ccgatcaaga aaagaaaagg aatagggaga gactgtcata cttgccggct
     1081 caaaaacctc aacagtgggc agatcatttt atgacctaat ctggctcaaa ggcaaccatt
     1141 gggtgaaggg ctcatagttg tcgtggcttc tactagagca tacacccaac tcagatggga
     1201 ctgtctctta atattgacac ttctactact gccttgattg agccactacc ggtgattgag
     1261 tttgttactt ggctcctaaa cagggatgcc atagctagac cattatctga tgaatctgac
     1321 caggtgaagg taaaatcttt tatcaagttg acatatggta attggttcca agtgtaatgg
     1381 ttttttggag taaatgcact ttcgcaacga gtttaaacta aaattattta agtctaacaa
     1441 agagtatggt gcacttttct aagttcattt gtatctttgt atgaaatcta aagttgaaca
     1501 ggttatcatg tcgtataaag ttgaacaacc attaattata taattttttt
//
LOCUS       XR_011757393            1719 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840398), transcript variant X2, misc_RNA.
ACCESSION   XR_011757393
VERSION     XR_011757393.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1719
                     /gene="LOC139840398"
                     /note="uncharacterized LOC139840398; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840398"
     misc_RNA        1..1719
                     /gene="LOC139840398"
                     /product="uncharacterized protein, transcript variant X2"
                     /db_xref="GeneID:139840398"
ORIGIN      
        1 atatgcaatt acatttggcc aaattttgaa atcaattaac cctaaatcga tttcttcacg
       61 tagtccacag catcgtacgc tcttcctcac ttctcaaact ctaatttcta atcaacatgt
      121 aacaacacga tttgacctat gtttatcccg attcacgatt tctaattcat ctgatgtatc
      181 tattgattat catctgcata tagtttttcg attacaacga atcattttcg tgagaaatcc
      241 gtgaaggatt caccttgatt ttgttgtaca tctgtctaaa tcgctatttc tgtcatcgcc
      301 aaattcatgg gatctgataa caatatccag attaggtttg aaatctattt gtggttaccg
      361 gcgtctaagg gttctgcgac actgagtatt tgagaaaggc aagatagaaa cagattgtaa
      421 tacgattctt caaaaggttt gtgattagtt gtttccgtag atgatgttaa tcatgaattt
      481 gttaacgttt aagaacgttc ttctctgcat aatgatgcta aattatgaat ctgcataatc
      541 tttgatggtg ctgaattagg agaatatgct aagaagaaaa ttgctattga aaatgaacgt
      601 caagaacgac ttaagttact gaaagctgaa cgtctgaagt cactgacatc aatgaagaca
      661 aaatatgaaa attataagga aatcgtgtct catggtggta ttacatttga catgtggggt
      721 gatgcacaaa actgtttttg taattgctgt ggagctttct cctgtacaaa gcgtgctata
      781 caaaagattt cttgatgtac atggactcac tcaagaaaag gcttctattg agaaaagcaa
      841 caagagtttt tccgcaagtt atcaagctag cattggctca ggtttggaac tgatttgaaa
      901 ttggtcagcc acttaaaacg ggcttgactg acaatcggta ttaaggtgat cgtgttaaga
      961 aaaattattt catagtttta gttatttcta atacatccat aagacctaca aatattttat
     1021 gtgtgtttac taacttacaa ttgtgtagga actgatcgtg ttaaaacaat gcattcattc
     1081 agagagaagc ttcatgctca caaaatgcag tctgagtatt taaaaactgt tgctgcaaaa
     1141 cagaaccata caacacaaat ccaacgcttc gcctaaaacg aacccgatac aaaaatgccg
     1201 atcaagaaaa gaaaaggaat agggagagac tgtcatactt gccggctcaa aaacctcaac
     1261 agtgggcaga tcattttatg acctaatctg gctcaaaggc aaccattggg tgaagggctc
     1321 atagttgtcg tggcttctac tagagcatac acccaactca gatgggactg tctcttaata
     1381 ttgacacttc tactactgcc ttgattgagc cactaccggt gattgagttt gttacttggc
     1441 tcctaaacag ggatgccata gctagaccat tatctgatga atctgaccag gtgaaggtaa
     1501 aatcttttat caagttgaca tatggtaatt ggttccaagt gtaatggttt tttggagtaa
     1561 atgcactttc gcaacgagtt taaactaaaa ttatttaagt ctaacaaaga gtatggtgca
     1621 cttttctaag ttcatttgta tctttgtatg aaatctaaag ttgaacaggt tatcatgtcg
     1681 tataaagttg aacaaccatt aattatataa tttttttat
//
LOCUS       XR_011757394            1616 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840398), transcript variant X3, misc_RNA.
ACCESSION   XR_011757394
VERSION     XR_011757394.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1616
                     /gene="LOC139840398"
                     /note="uncharacterized LOC139840398; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840398"
     misc_RNA        1..1616
                     /gene="LOC139840398"
                     /product="uncharacterized protein, transcript variant X3"
                     /db_xref="GeneID:139840398"
ORIGIN      
        1 atatgcaatt acatttggcc aaattttgaa atcaattaac cctaaatcga tttcttcacg
       61 tagtccacag catcgtacgc tcttcctcac ttctcaaact ctaatttcta atcaacatgt
      121 aacaacacga tttgacctat gtttatcccg attcacgatt tctaattcat ctgatgtatc
      181 tattgattat catctgcata tagtttttcg attacaacga atcattttcg tgagaaatcc
      241 gtgaaggatt caccttgatt ttgttgtaca tctgtctaaa tcgctatttc tgtcatcgcc
      301 aaattcatgg gatctgataa caatatccag attaggtttg aaatctattt gtggttaccg
      361 gcgtctaagg gttctgcgac actgagtatt tgagaaaggc aagatagaaa cagattgtaa
      421 tacgattctt caaaaggttt gtgattagtt gtttccgtag atgatgttaa tcatgaattt
      481 gttaacgttt aagaacgttc ttctctgcat aatgatgcta aattatgaat ctgcataatc
      541 tttgatggtg ctgaattagg agaatatgct aagaagaaaa ttgctattga aaatgaacgt
      601 caagaacgac ttaagttact gaaagctgaa cgtctgaagt cactgacatc aatgaagaca
      661 aaatatgaaa attataagga aatcgtgtct catggtggta ttacatttga catgtggggt
      721 gatgcacaaa actgtttttg taattgctgt ggagctttct cctgtacaaa gcgtgctata
      781 caaaagattt cttgatgtac atggactcac tcaagaaaag gcttctattg agaaaagcaa
      841 caagagtttt tccgcaagtt atcaagctag cattggctca ggtttggaac tgatttgaaa
      901 ttggtcagcc acttaaaacg ggcttgactg acaatcggta ttaaggaact gatcgtgtta
      961 aaacaatgca ttcattcaga gagaagcttc atgctcacaa aatgcagtct gagtatttaa
     1021 aaactgttgc tgcaaaacag aaccatacaa cacaaatcca acgcttcgcc taaaacgaac
     1081 ccgatacaaa aatgccgatc aagaaaagaa aaggaatagg gagagactgt catacttgcc
     1141 ggctcaaaaa cctcaacagt gggcagatca ttttatgacc taatctggct caaaggcaac
     1201 cattgggtga agggctcata gttgtcgtgg cttctactag agcatacacc caactcagat
     1261 gggactgtct cttaatattg acacttctac tactgccttg attgagccac taccggtgat
     1321 tgagtttgtt acttggctcc taaacaggga tgccatagct agaccattat ctgatgaatc
     1381 tgaccaggtg aaggtaaaat cttttatcaa gttgacatat ggtaattggt tccaagtgta
     1441 atggtttttt ggagtaaatg cactttcgca acgagtttaa actaaaatta tttaagtcta
     1501 acaaagagta tggtgcactt ttctaagttc atttgtatct ttgtatgaaa tctaaagttg
     1561 aacaggttat catgtcgtat aaagttgaac aaccattaat tatataattt ttttat
//
LOCUS       XM_071830669             345 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840399), mRNA.
ACCESSION   XM_071830669
VERSION     XM_071830669.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..345
                     /gene="LOC139840399"
                     /note="uncharacterized LOC139840399; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840399"
     CDS             1..345
                     /gene="LOC139840399"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686770.1"
                     /db_xref="GeneID:139840399"
                     /translation="MYADSRRWPVIFTVGEQVYLKVSPWKGVIRFGKRGKLAPSYIAP
                     FRIQQVFNDQTVVLDLPAELAGIHNTLNVCYLRKCKVDDEIQILPLQDLKVDMNKKLV
                     EEPVRIVDKKLI"
ORIGIN      
        1 atgtacgccg attcgcgcag atggccagtt attttcaccg taggtgagca ggtatacttg
       61 aaagtatcgc catggaaagg agtcattcgt tttggtaaaa ggggcaaatt agctccgagt
      121 tacattgcac cgtttagaat acaacaggtg ttcaatgatc agacagtagt attagatctt
      181 cctgctgagt tagctggtat tcacaacaca ctcaatgtgt gttatcttcg taagtgcaag
      241 gtagacgatg aaattcagat tctaccactg caagatttga aagttgatat gaataagaag
      301 ttagtggaag aacctgtaag aattgtagac aagaagttga tatga
//
LOCUS       XM_071830670            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840400), mRNA.
ACCESSION   XM_071830670
VERSION     XM_071830670.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139840400"
                     /note="uncharacterized LOC139840400; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840400"
     CDS             1..1089
                     /gene="LOC139840400"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686771.1"
                     /db_xref="GeneID:139840400"
                     /translation="MTEEEEQSQQTSYPEEPKKKWYVIFDGPSKGIYNNWATANQFIL
                     GRSVTHKSYKTLEAAKVAFNEAYKTIATQPANEAKRSGSGMVNLNHYLYGQTASLNAM
                     NRMKSILSTTEKEDKKKPSTHSFQRLWDNLVNYNENYATMMFYPKNRKTGPKAVFLPE
                     ASPLTISEYFIHGLIDTLYIDGRTLHEIKELPQRMQEAITRYRDNFAKEREIFLRMHS
                     SYPIFNEDQQLLVPSFTIAYLGVSNGNYPTRDEALKITPTIDHLVSSLAGVYFGSSKI
                     GNGQEQQENVRINYVHKNVLIYSSTIEKIDEKCLNLINNFEEPFEAFTGQLSALPEDI
                     KRRLCKQISRAPRHSCEYCQEEDTFLAS"
     misc_feature    58..180
                     /gene="LOC139840400"
                     /note="Caulimovirus viroplasmin; Region: Cauli_VI;
                     pfam01693"
                     /db_xref="CDD:460297"
ORIGIN      
        1 atgactgaag aagaagaaca atctcaacaa acatcgtatc cagaagaacc aaagaaaaaa
       61 tggtatgtca tctttgacgg accatccaaa ggaatataca acaactgggc aacagcaaat
      121 cagtttatat taggcagaag cgtaacccat aaaagttaca aaactctaga agcagcaaag
      181 gtagcattca acgaagcata taaaacaata gcaactcaac cagccaatga agcaaaacgt
      241 tcaggatcag gaatggttaa tcttaaccat tatctttatg gtcaaacagc aagtctaaat
      301 gccatgaata ggatgaaaag tattctctct acaacagaaa aagaagataa gaagaaacca
      361 tccacacaca gttttcaaag gttatgggat aaccttgtta attacaacga aaattacgca
      421 acaatgatgt tctatcccaa aaataggaaa actggcccta aagcagtttt cttaccagaa
      481 gcatcaccat taacaatatc agaatatttc atccatggat taattgatac cttatatatc
      541 gatggaagaa cacttcatga aatcaaggaa ctccctcaaa gaatgcaaga agcaataact
      601 agatacagag acaattttgc aaaagaaaga gaaatatttc tcagaatgca ttcaagctac
      661 ccaatattta acgaagacca acaattactt gtcccatcat ttacaatagc atatctcgga
      721 gtaagtaatg gtaattatcc aacaagagac gaagcattaa aaataactcc aacaatcgat
      781 catctggtgt catcactagc aggagtctat ttcggatcct caaaaatagg aaatggccaa
      841 gaacagcaag aaaatgtgag aatcaattac gttcacaaaa atgtcttaat ctactcaagc
      901 actattgaaa aaattgatga aaaatgtctc aatctaatca acaattttga agaacccttt
      961 gaagcattca caggacaact ttctgctctt ccagaagata taaaaaggcg tttatgtaaa
     1021 cagatatcca gggcaccaag gcacagttgc gaatactgtc aagaagaaga cacattccta
     1081 gcatcataa
//
LOCUS       XM_071830671             336 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840401), mRNA.
ACCESSION   XM_071830671
VERSION     XM_071830671.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..336
                     /gene="LOC139840401"
                     /note="uncharacterized LOC139840401; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840401"
     CDS             1..336
                     /gene="LOC139840401"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686772.1"
                     /db_xref="GeneID:139840401"
                     /translation="MALQYPLLFPYGETGYHEAIPYNNNSGKRQTARGYVTMREYYCY
                     RIQHRENEGTTLLRGGRLFQQFLVDAYTSVEEQRLQWVRHHQNELRTDIYNNVCDAVT
                     RGDTSAASI"
     misc_feature    124..>318
                     /gene="LOC139840401"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atggcgttgc aatacccttt actatttcca tacggtgaaa ccggatatca cgaagcgata
       61 ccatataata ataatagcgg gaaaaggcag actgccagag gttacgtcac tatgcgagag
      121 tactattgct atagaattca gcatcgtgaa aatgagggca caactctcct aagaggtggt
      181 cgattattcc aacaattctt ggtcgacgca tatacatccg ttgaagaaca aagattgcag
      241 tgggtaagac atcaccaaaa tgagttgcga accgacatat acaataatgt ttgtgatgct
      301 gttacaaggg gcgacacgtc agcggcatca atctga
//
LOCUS       XM_071830672            1155 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840402), mRNA.
ACCESSION   XM_071830672
VERSION     XM_071830672.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139840402"
                     /note="uncharacterized LOC139840402; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840402"
     CDS             1..1155
                     /gene="LOC139840402"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686773.1"
                     /db_xref="GeneID:139840402"
                     /translation="MALCREFDNPDLFITSTSNPKWPEIDGMLSYVNGQKAPDRHEIV
                     ARVFKQKLDALTNDIMKEHIFGTCQAGLYIIEFQKRGLPHVHMLIWLTRDYKCKTPSD
                     IDDLISAEIPSQIHDPEGFKAVTEYMLHEPCGGSHMDAPFIIDRKCSKHFPKPYYAET
                     TIDKDGSRAIKYLFKYLNKGPDRATIVIQENMIPNENSTVQTVIDVDEIKNYLDCRYL
                     SPLTLRDSQQLPPLLHRESIKETMFTQWFELNKQDEHALSLTYAKIPKDYVWNQDAKI
                     WTRRKLRTCIGRIVYSNPASGERYYLRMLLNIVKGPRSFEEIRTVDGTLHPTFKDACF
                     AHGLLNDDKEWTEAISKSRLWATGSQLRDLFVTMLLFCNVSKPLTLWELN"
     misc_feature    <1..267
                     /gene="LOC139840402"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atggctttat gtcgggaatt tgataaccct gatttattca tcacctccac ttctaaccca
       61 aaatggcccg aaattgatgg aatgctctcc tatgtcaacg gtcaaaaggc accagatcgc
      121 catgagattg tcgcccgagt attcaaacag aaactagatg ctctaacaaa tgatatcatg
      181 aaagaacaca tatttggaac gtgtcaagca ggcctctaca ttatcgaatt tcaaaagcgc
      241 ggattacctc atgtacatat gttaatatgg ttgacacgtg attacaagtg caagacacca
      301 tcagacatcg atgatctcat atcagcagag ataccctctc aaatacacga tcctgaaggg
      361 tttaaagcag tcactgaata catgttgcac gaaccttgcg gtggttcgca tatggatgct
      421 cctttcatta ttgataggaa atgctcaaaa cactttccta aaccatatta tgcagaaacc
      481 actattgaca aagacggatc acgcgcaatc aagtacttat tcaaatactt aaacaaaggt
      541 ccggatcgag caacaatagt catacaagaa aacatgatcc ccaacgaaaa ctcaacagtg
      601 caaactgtta ttgacgttga cgaaattaag aattatttgg attgccgata tttatcaccg
      661 ttgacattgc gcgattccca gcaactccct ccccttctac acagagagag cattaaagag
      721 acaatgttca cccagtggtt tgaacttaac aaacaggatg aacatgcgct ctccctaact
      781 tacgcaaaaa tccccaaaga ttatgtgtgg aaccaagatg ccaaaatatg gacccgcaga
      841 aaactaagaa catgcatcgg acgtattgtc tattcaaatc ctgcatcagg tgaacgttac
      901 tacctacgga tgttgttgaa catagttaaa ggtccccgtt cctttgagga aattcgaact
      961 gtagatggta cattgcaccc cacgtttaaa gatgcatgct ttgcacatgg tttgttgaac
     1021 gatgataaag aatggacaga agccatctct aaatcaaggc tatgggcaac aggttcgcaa
     1081 ctgcgagact tatttgtaac catgttactc ttttgcaatg taagtaaacc actcacacta
     1141 tgggaactaa attga
//
LOCUS       XM_071830673             474 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840403), mRNA.
ACCESSION   XM_071830673
VERSION     XM_071830673.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..474
                     /gene="LOC139840403"
                     /note="uncharacterized LOC139840403; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840403"
     CDS             1..474
                     /gene="LOC139840403"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686774.1"
                     /db_xref="GeneID:139840403"
                     /translation="MENSTCGIKQQTQLASLIQEARLIIWDEAPMTQRFAFEALDKTL
                     RDILGAKDDRNRSKIFGGMPVLLGGDFRQILPVILKGKRQEIVHACINRSELWQHCNL
                     HTLSRIMRVNEYTPDGHLDTRKQNFNKWVLDIGEGKVPAIAKDGEDEPTWIKIPE"
     misc_feature    <4..>465
                     /gene="LOC139840403"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atggaaaaca gcacatgcgg aataaaacaa caaacacaat tggcatcact tattcaagaa
       61 gcccgtttaa taatttggga tgaggcgcca atgactcaaa ggttcgcttt cgaggcccta
      121 gataaaactt tgcgagacat tttaggggcg aaggatgata gaaacagatc aaagattttc
      181 ggaggtatgc ctgtcttact aggtggcgac tttagacaaa tacttccagt gatactaaag
      241 ggcaaaagac aagaaatagt ccatgcatgc attaacaggt ccgaattatg gcaacattgt
      301 aacctgcaca cattatcccg cattatgcgg gtaaacgaat acactccaga tggacatctt
      361 gatacacgaa aacaaaactt caataaatgg gtactagata taggggaagg taaagttcct
      421 gcaattgcta aagatgggga ggatgagcca acatggataa aaattcccga ataa
//
LOCUS       XM_071830674             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840404), mRNA.
ACCESSION   XM_071830674
VERSION     XM_071830674.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139840404"
                     /note="uncharacterized LOC139840404; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840404"
     CDS             1..585
                     /gene="LOC139840404"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686775.1"
                     /db_xref="GeneID:139840404"
                     /translation="MTYKSSDEICKGSTDSMEQQQTYPVEYLNTLNFPGVPPHKLKLK
                     LGQPVMLLRNLCPSAGLCNGTRLILTDFQKFVLQARIITGSHIGKTVIIPRIVLTSAQ
                     TKWPFVMQRFQFPVKPCYAMTINKSQGQSLKYVGLYLPKPVFSHRQLYVALSRVTDPS
                     GLKIVMINDSDERLKGHTRNVVYRETFFNLKHDS"
     misc_feature    <1..216
                     /gene="LOC139840404"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <106..558
                     /gene="LOC139840404"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; Region: RecD; COG0507"
                     /db_xref="CDD:440273"
ORIGIN      
        1 atgacataca aaagctctga tgagatttgc aagggatcaa ccgacagcat ggaacaacaa
       61 caaacatatc ccgtggaata cttaaatacg ttaaacttcc caggtgttcc tcctcacaaa
      121 cttaagctaa aattaggtca accagttatg ttgttacgaa acctatgccc aagcgcaggt
      181 ctgtgcaacg gaacacgtct catcctaaca gatttccaaa agtttgttct tcaagcccgg
      241 attataacag gctcgcatat aggaaaaaca gtcatcattc cacgaattgt tcttacgtcg
      301 gcccaaacaa aatggccctt tgtgatgcaa agatttcaat tcccagtcaa gccctgttat
      361 gcaatgacaa taaacaaaag ccagggacaa tctttaaaat atgtcggtct ttacctacct
      421 aaaccagttt ttagccacag acaactatat gttgccctat cacgagtaac cgacccatct
      481 ggtttaaaaa tagtcatgat aaatgatagc gacgaacgtt taaagggtca cacacgtaat
      541 gttgtctaca gggaaacttt cttcaacttg aaacatgatt catag
//
LOCUS       XM_071830675            1059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides stromal cell-derived factor
            2-like protein (LOC139840405), partial mRNA.
ACCESSION   XM_071830675
VERSION     XM_071830675.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..1059
                     /gene="LOC139840405"
                     /note="stromal cell-derived factor 2-like protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139840405"
     CDS             <1..840
                     /gene="LOC139840405"
                     /codon_start=1
                     /product="stromal cell-derived factor 2-like protein"
                     /protein_id="XP_071686776.1"
                     /db_xref="GeneID:139840405"
                     /translation="PAVAPPSTDHNHPNTNNITRRRNLSSNSSPTTTTSETLASSKSE
                     LDLPFWARRWFIGLLLVITISCFGIAVFLLLTLDSDYTSSSADPVYADTTECVEITYG
                     SLVKLMHEKTSFRLHSHNVPYGSGSGQQSVTGSPDVDDANSYWIVKPMSETSAKQGDG
                     IKSGTIIRLQHMKTRKWLHSHLHVSPLSGNLEVSCFGDDGNSDTGDYWRLEIEGKGKT
                     WRQYQRIRLRHVDTSGYLHSHNKKYNRIAGGQQEVCGINEKLADNVWLAVEGVFIPVS
                     ESK"
     misc_feature    295..822
                     /gene="LOC139840405"
                     /note="MIR domain, beta-trefoil fold, found in Arabidopsis
                     thaliana stromal cell-derived factor 2-like protein
                     (AtSDF2) and similar proteins; Region:
                     beta-trefoil_MIR_AtSDF2-like; cd23294"
                     /db_xref="CDD:467765"
     polyA_site      1059
                     /gene="LOC139840405"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccagccgtgg ctccaccgtc aactgatcac aatcacccta acactaacaa tatcactcgt
       61 agaagaaact tatcgtcaaa ttcatcacct acaactacta caagtgaaac cctagcttca
      121 tctaaatcgg aattagactt accgttttgg gcccgcaggt ggtttattgg actgctgtta
      181 gttataacga tttcgtgctt cggtattgct gtttttcttt tgttaaccct agattctgat
      241 tatacttcct catcagcaga tcctgtgtat gctgatacta cagaatgtgt tgagattacc
      301 tatgggtcat tagtcaagct gatgcatgaa aagacaagtt tccgactgca ttcacacaat
      361 gtgccatatg gatcaggcag tgggcagcaa tctgttacgg gatctcctga tgtagatgat
      421 gcaaatagct actggattgt gaagcctatg tcagagacat cagcaaaaca aggagacggt
      481 ataaaaagtg gaaccataat tcgattacaa cacatgaaaa ccaggaaatg gctccatagc
      541 catttgcatg tttcaccact atcaggcaat ctagaggtga gttgcttcgg agatgatggt
      601 aattcagata cgggagatta ttggagactt gaaattgaag gaaaagggaa aacctggaga
      661 cagtatcagc gaataaggct tcggcatgtt gacacgagtg gttatctgca cagccataat
      721 aagaaataca accgcattgc tggtggccag caagaggttt gtggtatcaa tgagaaactt
      781 gcagacaatg tttggttggc agtggagggt gtctttatac cagtctctga aagcaaatga
      841 atggatcatt attcgatgta gttcaaagct tttacatgtt ccttttcgga tttatgtgta
      901 ggtttgttat aagccagctt atgtgtagta tttaactatt tatatttaaa tgtgcagcaa
      961 aggcccaatt tttggtgcct ttaagatatc tactgttcct ggacaatcca tgtgtcagtt
     1021 ccgttatatg tgatgtggta atacgggttg ttgattaaa
//
LOCUS       XM_071830676            1687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840406), mRNA.
ACCESSION   XM_071830676
VERSION     XM_071830676.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1687
                     /gene="LOC139840406"
                     /note="uncharacterized LOC139840406; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840406"
     CDS             1..1656
                     /gene="LOC139840406"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686777.1"
                     /db_xref="GeneID:139840406"
                     /translation="MEAKSTCVSKIQTKLINARKKLLTVPSTIPNLLDVLAEVEQVLS
                     EVQRPLSESIERAIRPIVNPLIAKKLMKHHDMDVNISVVCCICEILRIMAPGLPYTNK
                     QMKEFLELVVMTFEKLSSAFGRSYTRMAKFFTICSNFKMPALMSDLQLDGLVVRLFKQ
                     FLTVADSNSSAVVAEMEEFLTMLIEESKPLNLELVDLLAASVQKDKQIVSPVCWQLGR
                     NVINNCVAELKPHLPHMFKDTSPHTTEKINLGKVTVHKIKLECLEGTSNTSGIDSDTK
                     SVSYNDPLVPPGFVKQLIGKRKRDLSPKKGNVQSVDYGENLVGSRIKVYWPDDKMYYE
                     GVVIYFDGIRKRHKILYYDGDEETLDLKREQWELVQNVFATSDSEEGSCSESGMTCIQ
                     GYTVKSSIAPILKAIFKKHGDIAANCSLQASSMRASLLTVVCDIVRRVQTNDVIEMKE
                     IESEIKDAEAANINVLWIRAHFEAAKKRKEAFMESVLIRKTKENIISVKRAAKMELDE
                     TRIELMAAQRKFEKAERCVKILGLVQKKLNDKKVEIEAAQSIL"
     misc_feature    91..>696
                     /gene="LOC139840406"
                     /note="Sister chromatid cohesion protein PDS5; Region:
                     PDS5; cd19953"
                     /db_xref="CDD:410996"
     misc_feature    order(121..123,268..273,280..291,412..423,427..432,
                     436..441,556..558)
                     /gene="LOC139840406"
                     /note="WapI binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:410996"
     misc_feature    952..1104
                     /gene="LOC139840406"
                     /note="Tudor-like Agenet domain found in Arabidopsis
                     thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar
                     proteins; Region: Tudor_Agenet_AtEML-like; cd20404"
                     /db_xref="CDD:410475"
     misc_feature    order(976..978,991..993,997..999,1051..1053,1057..1059,
                     1063..1065)
                     /gene="LOC139840406"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:410475"
     misc_feature    <1180..1584
                     /gene="LOC139840406"
                     /note="Arabidopsis phospholipase-like protein (PEARLI 4);
                     Region: PEARLI-4; pfam05278"
                     /db_xref="CDD:253129"
ORIGIN      
        1 atggaggcca aatcaacatg tgtctcaaag atacaaacca agctaattaa tgctagaaag
       61 aagctgttga ctgttccttc tacaattcca aatcttctcg acgttcttgc tgaagtggag
      121 caagttctgt ctgaagtcca acgaccacta tcggaatcga tagaacgtgc aatacgtcca
      181 atagttaatc cactgattgc taaaaaactg atgaaacatc atgatatgga cgtaaatatc
      241 tcggttgtat gttgcatttg tgagattttg aggattatgg caccaggcct tccttacacc
      301 aataaacaga tgaaggagtt tcttgaactt gtagtgatga ctttcgagaa actatcttct
      361 gcgtttggaa gatcgtatac aagaatggct aaatttttta caatatgtag caactttaag
      421 atgccagcac ttatgtcgga tttgcagctc gacggattag tagttcgact ttttaaacaa
      481 tttttaactg ttgctgactc aaattcatcc gctgttgtag cggaaatgga agaatttttg
      541 actatgttga tagaagaaag caagccactt aatctcgagc ttgtagatct tttagccgca
      601 agtgttcaaa aggataaaca gattgtatca cctgtttgtt ggcaattagg gagaaatgtt
      661 atcaacaact gtgttgctga actgaaaccg catcttccac atatgtttaa ggatactagt
      721 ccacatacaa ctgaaaaaat caatttgggg aaggttacag ttcacaagat aaaactcgag
      781 tgtctagagg ggacaagtaa cacatcaggc atcgactctg ataccaaatc tgtctcgtat
      841 aatgatccac tagtaccacc tggattcgta aagcaattga tcggaaaacg caaaagagat
      901 ctctctccaa aaaagggaaa tgttcaatct gttgattatg gtgaaaattt ggtgggtagc
      961 aggataaaag tgtattggcc tgatgataaa atgtattacg aaggagttgt aatatatttc
     1021 gacggtatcc gaaagagaca caagatattg tattatgacg gtgatgaaga aacgttggac
     1081 ctcaagcgag aacagtggga gttggttcag aatgtgtttg ctacgtcgga ttccgaagaa
     1141 ggttcttgtt ctgaatctgg catgacgtgt atccaaggct acacggtaaa aagcagtatt
     1201 gcaccgattc ttaaagccat tttcaagaaa catggtgaca ttgctgcaaa ttgttcattg
     1261 caagcatctt caatgagagc atctttactt acagttgttt gtgatattgt gagacgcgtt
     1321 caaaccaacg atgttatcga gatgaaagaa atcgagagtg aaattaaaga tgcggaggca
     1381 gccaatatta atgtgttgtg gattcgagcg cactttgaag ccgctaagaa aaggaaggag
     1441 gccttcatgg agtccgtttt gattaggaaa acgaaagaaa acatcatttc ggttaaaaga
     1501 gctgcaaaaa tggaacttga tgagacacga atagaactta tggctgcgca acgaaaattt
     1561 gaaaaggctg aacgctgcgt gaaaatactc ggtcttgttc aaaagaagct aaatgacaaa
     1621 aaagtggaaa ttgaagctgc acaatcaatt ttataggcta gttaaaacat atgctattgt
     1681 gtgtaat
//
LOCUS       XM_071830677            1333 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139840407), mRNA.
ACCESSION   XM_071830677
VERSION     XM_071830677.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1333
                     /gene="LOC139840407"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840407"
     CDS             155..1333
                     /gene="LOC139840407"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071686778.1"
                     /db_xref="GeneID:139840407"
                     /translation="MAHLDHFQHLKIQLQVINSATNNFAEENCIGKGGFGKVYLGKFV
                     DGSKGEMLVAWKRLNPEFGQGDSEFWKEIMMLSFYRHENIISLIGYCDDQNEKIIAYE
                     YASKRSLDLHLDTNDLTWIRRLNICIGAARGLEYLHAPSETQLRVLHRDIKSSNILLD
                     DNWNAKISDFGLSKFGPANHILSYLITNKVGTRGYCDPLYEELGFLTKESDVYSFGVV
                     LFEVLCGRLCFGNNKRRPLLGLVRQSYEKNLVNEIVHDSIKEEIEPESLKVFTEIAYQ
                     CLNKKREERPSMTQMVEALELAVKCQVKVIRAFNLKKKSLLTSTKPYVILKLTQSSLQ
                     CAKKTSVKDKATPEWNEEFDLYVENLDVQCLHICLLNATSRIDDLKVMRSVLAAGKDN
                     "
     misc_feature    242..1042
                     /gene="LOC139840407"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(242..253,260..262,266..268,314..316,320..322,
                     407..409,455..466,605..607,617..622,626..628,656..661)
                     /gene="LOC139840407"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1061..>1255
                     /gene="LOC139840407"
                     /note="Protein kinase C conserved region 2 (CalB); Region:
                     C2; smart00239"
                     /db_xref="CDD:214577"
ORIGIN      
        1 taaactgaca aataagaagt ttacgttcaa agggatactt catactttcc tattagtttc
       61 ctattgttaa tattatttca cattcaagat cttcattaat aatagagagg tgctctgctt
      121 tgtgttttat gttatctatt ggaggaccaa aattatggct cacctagatc attttcaaca
      181 tctcaaaata caattacaag tcataaattc agcaaccaac aacttcgccg aggaaaattg
      241 tatcggaaaa ggaggttttg ggaaggttta tctagggaaa ttcgtagacg gttccaaggg
      301 cgagatgttg gttgcttgga aacgtctaaa tccagaattt gggcaaggag actccgaatt
      361 ttggaaagaa ataatgatgc tttcgtttta tagacatgag aatattatct ctcttatagg
      421 gtattgtgat gatcaaaatg aaaagatcat tgcttacgag tatgcatcta agagaagtct
      481 tgacttacat ctagacacca atgatttaac ttggattcga cgccttaata tatgcatagg
      541 ggcggctcgt ggactagagt atcttcatgc tccttccgag acacaactta gagtattgca
      601 tcgagatatt aagagttcta atattttatt agacgataat tggaatgcaa agatctctga
      661 ttttggcctc tctaaatttg gtcctgcgaa ccatatatta tcatatctca tcactaataa
      721 agtaggcacc cgtggttatt gtgatcctct atatgaagag ttgggtttct taacaaaaga
      781 gtcggatgtt tactcttttg gagtggtttt gtttgaggtg ttatgtggga ggttgtgttt
      841 tggtaacaac aaacgtcgac cgttacttgg attagtgaga caatcctatg aaaaaaattt
      901 ggtaaacgaa atagtacatg atagtataaa agaggaaata gaacccgaat cattgaaggt
      961 ctttacggaa atagcttatc agtgtttaaa taaaaaacgt gaagaacgtc cgtcgatgac
     1021 gcaaatggtg gaagcacttg aacttgcagt taaatgtcaa gtgaaggtta taagagcttt
     1081 taatctcaaa aagaaaagcc ttttaacctc tacaaagcct tatgtgattc tgaaactaac
     1141 tcagagtagt cttcaatgcg caaagaaaac tagtgtgaag gacaaggcga cacccgagtg
     1201 gaacgaagaa ttcgatttat atgtcgaaaa tcttgacgtt cagtgtctgc acatatgtct
     1261 tttaaatgca acatcgagga tagacgatct caaagttatg agatcggttc ttgctgcagg
     1321 caaagacaac taa
//
LOCUS       XM_071830678            1538 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative E3
            ubiquitin-protein ligase XBAT31 (LOC139840408), mRNA.
ACCESSION   XM_071830678
VERSION     XM_071830678.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1538
                     /gene="LOC139840408"
                     /note="putative E3 ubiquitin-protein ligase XBAT31;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 21 Proteins"
                     /db_xref="GeneID:139840408"
     CDS             179..1519
                     /gene="LOC139840408"
                     /codon_start=1
                     /product="putative E3 ubiquitin-protein ligase XBAT31"
                     /protein_id="XP_071686779.1"
                     /db_xref="GeneID:139840408"
                     /translation="MGQGLSCRIQDEHGLFTAVQFGDFELVKSLVEKEPSIILQTTVY
                     DHHSALHIAAANGQIQILSMLLEDRSMNPDSLNRHKQTPLMLAAMHGKISCLEKLIDA
                     GANILMFDSLNGRTCLHYAAYYGHSDCVETILDAARTSHVAASWGFSRFVNIRDSKGA
                     TPLHLAARQRRSQCVHLLLDSGALVCASTGGYGFPGSTPLHLAARGGSMDCIRELLAW
                     GADRLQRDASGRIPYMVAIKHKNDGCAALLNPSSAEPLVWPSPLKFISELNRDAKALL
                     EQALIEANREREKTILKGTCYSLPSPSHLDTATTDDNISETSETELCCICFDQVCTIE
                     VQDCGHQMCAQCTLALCCHNKPNPTTSSHTAPVCPFCRSNIAQLVVAKVKVNATHNEV
                     DFYSSTKLPKLRKSRHFSEGSSSFKGLSDVPSFGKMVGRGSGRISADNECIGKP"
     misc_feature    221..376
                     /gene="LOC139840408"
                     /note="Ankyrin repeats (many copies); Region: Ank_4;
                     pfam13637"
                     /db_xref="CDD:372654"
     misc_feature    221..301
                     /gene="LOC139840408"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    311..409
                     /gene="LOC139840408"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    323..922
                     /gene="LOC139840408"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    order(413..415,419..421,431..436,443..451,455..460,
                     470..472,479..481,506..508,515..517,521..523,533..538,
                     545..553,557..562,572..574,581..583,644..646,650..652,
                     656..658,668..673,680..688,692..697,707..709,716..718)
                     /gene="LOC139840408"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    413..508
                     /gene="LOC139840408"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    515..646
                     /gene="LOC139840408"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    650..739
                     /gene="LOC139840408"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    749..838
                     /gene="LOC139840408"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1121..1315
                     /gene="LOC139840408"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(1145..1147,1154..1156,1190..1192,1196..1198,
                     1205..1207,1214..1216,1280..1282,1289..1291)
                     /gene="LOC139840408"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438506"
ORIGIN      
        1 cacactccaa aacctgcccg gtcccaccat ttctctctat ccatgcttaa aatgtgaatc
       61 ctttgccaca tttctctaat ccctcccctc cggtggtcgt actggatgtt tccggcggac
      121 atccgccgtc ctccgcccta aacaaccact cccctgtatt gaattaaata tcaataaaat
      181 ggggcaggga cttagttgca gaatacaaga tgaacatggg ttatttactg cagtacaatt
      241 tggtgatttt gaacttgtaa aaagtcttgt agaaaaagaa ccttctatta ttttacaaac
      301 aactgtatat gatcatcatt ctgcacttca tatagctgct gcaaatggtc agatccagat
      361 tctatctatg ctgttggaag atagatcaat gaatcctgat tcgttgaatc gtcataaaca
      421 gactccattg atgttagctg caatgcatgg aaagattagt tgtcttgaaa agcttattga
      481 tgctggggct aatattttga tgtttgattc attaaatgga agaacttgct tgcattatgc
      541 tgcttattat ggtcattctg attgtgttga aacaattctt gatgctgccc ggacctctca
      601 tgttgctgct tcttggggtt tttcaagatt tgtgaatatt agagacagta aaggtgcaac
      661 acctttgcat ttagctgctc gtcaaagacg gtcacaatgt gttcatttgc ttttagatag
      721 tggagctctt gtatgtgcct caactggtgg ctacggcttc ccaggtagta caccacttca
      781 tttggcagca agaggaggtt caatggattg catcagagaa ttattggcgt ggggtgcaga
      841 tcgacttcaa agagatgcat ctgggagaat tccatatatg gtagctataa agcataagaa
      901 cgacggttgt gcagctttat taaacccatc gtctgcagag cctttagtgt ggccgtcacc
      961 attaaaattc attagtgagc ttaatcgaga tgcaaaagct ttgttggagc aagctctaat
     1021 tgaagctaat agggagaggg agaaaacaat attaaagggt acatgttatt cgctaccgtc
     1081 tccatcgcat ttggataccg cgacaactga tgataatatc tcagagacaa gcgaaacaga
     1141 attatgttgt atatgttttg accaagtatg cacaattgag gtccaagatt gtggccacca
     1201 aatgtgtgct caatgcacct tagccttgtg ctgccacaac aagcccaacc ctacaacctc
     1261 atcccataca gcaccggtct gcccattttg ccgaagcaac attgcccaat tggtggttgc
     1321 aaaagtcaaa gtcaacgcta ctcacaatga ggttgacttt tattcttcta caaaactacc
     1381 aaaactgaga aaatctagac actttagtga gggaagcagt agcttcaagg gtctttcgga
     1441 tgtaccctcg ttcggaaaaa tggtgggccg tggctcaggg aggatctctg cggacaacga
     1501 atgcatcggc aaaccataat gcagtaataa acaagaca
//
LOCUS       XM_071830679             648 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840409), mRNA.
ACCESSION   XM_071830679
VERSION     XM_071830679.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..648
                     /gene="LOC139840409"
                     /note="uncharacterized LOC139840409; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840409"
     CDS             1..648
                     /gene="LOC139840409"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686780.1"
                     /db_xref="GeneID:139840409"
                     /translation="MEEEICTVTPFLSPSFSILLFMKIISLNIRGIGVGKESKVDWLK
                     KVCRIEKPNILLLQETKLHSVDINWIRVLWGNHNCDFIQKEIVEKSGGQLIIWDTSVY
                     DVVDSFISEFCIGVHGNWVGSGKDFYTINIYGPHDDPNKLRMWDFLSSLLCNNEDAWV
                     LGGDFNEVREEDDRFNCVFVESRVKKFNEFIADNRLIDIPLGGRKFTRVSDDGLI"
     misc_feature    73..498
                     /gene="LOC139840409"
                     /note="Endonuclease/Exonuclease/phosphatase family;
                     Region: Exo_endo_phos; pfam03372"
                     /db_xref="CDD:460902"
ORIGIN      
        1 atggaagaag aaatctgtac agtaacccct tttctttctc cttcgttttc aattctttta
       61 tttatgaaga ttatttcact taacattaga ggaatcgggg ttgggaagga aagtaaagtc
      121 gattggctca agaaagtatg taggattgaa aaacctaata tactactttt gcaagaaacg
      181 aaactgcatt ctgttgatat taactggatt cgtgtactgt gggggaacca taattgtgac
      241 tttattcaaa aggaaattgt cgagaagtca ggtggtcaat taataatatg ggatacgtct
      301 gtatacgatg ttgttgactc attcatatca gaattctgta ttggtgttca tgggaattgg
      361 gtcgggagtg ggaaagactt ctacacgatt aacatatatg ggccacatga tgacccaaat
      421 aagttaagaa tgtgggattt tctttcatca cttctgtgta acaatgaaga tgcatgggtt
      481 ctcggggggg atttcaacga agttcgtgaa gaagatgaca gatttaattg tgtattcgtt
      541 gaaagcaggg taaaaaaatt caatgaattt attgcagata acaggttgat tgatatcccg
      601 ttaggaggtc ggaaatttac tcgtgttagt gatgatggtt taatatag
//
LOCUS       XM_071830680            1071 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840411), mRNA.
ACCESSION   XM_071830680
VERSION     XM_071830680.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1071
                     /gene="LOC139840411"
                     /note="uncharacterized LOC139840411; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840411"
     CDS             1..1071
                     /gene="LOC139840411"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686781.1"
                     /db_xref="GeneID:139840411"
                     /translation="MQPPSPQQRSRISLAELKSRLIGKLGTERCKQYFDYLNKFLSLK
                     LSKAEFDKLCLRTVGRDGIPLHNQLIRSILRNACTAKSSVGNKKLSDGVLLQNGSIPN
                     LPNGDAFSASTRKPRTGTRKSALAPNGKTAHFSPSSSIQHSDEFNNVFENGDASSPDT
                     RRPVQKAESSDRKDKKLDAPLGIPCWPVSIGGAHRAPSSSKFVGVSETNGLLDTITLK
                     QRMEPVAAAHGVQGVSMDSANAVNKGLDLYLKGLIRSCCELKRARSGSMVNGVRSGQH
                     FQTQVHESKRKISVLDFRVAMELNPRQLGEDWPILLEEIFNLWCLMVNVGPILDARTP
                     HLSATNQLGVIKGMAYVGCCVV"
     misc_feature    31..777
                     /gene="LOC139840411"
                     /note="Transcriptional regulator of RNA polII, SAGA,
                     subunit; Region: SAGA-Tad1; pfam12767"
                     /db_xref="CDD:463692"
ORIGIN      
        1 atgcaaccac cgtcaccgca acagcgatca cggatcagtc ttgctgaatt gaaaagtaga
       61 ttaattggga agcttggaac agagagatgt aaacagtact ttgattactt gaataagttt
      121 ttgagtttga agttaagtaa ggctgaattt gataaacttt gtttaagaac cgttgggagg
      181 gatgggatcc cacttcataa tcagttaatt cgttccattt taagaaatgc gtgtactgca
      241 aaatcttctg tcggtaataa gaaactttca gatggcgtat tacttcagaa tgggtcgatt
      301 ccaaatttgc caaatgggga tgctttttca gcgtctacac gaaaaccaag aaccggaact
      361 cgtaaaagtg ctcttgcgcc aaatgggaaa accgcacatt tttccccgtc atcatctatc
      421 caacattcag atgaatttaa taatgtattc gagaacgggg acgcatcatc accagatact
      481 cgaaggccgg tgcaaaaggc ggaatcttca gatagaaaag acaagaaatt agatgctcca
      541 cttgggattc cttgttggcc agtgagtata ggtggggccc acagggcccc atctagtagt
      601 aaatttgttg gtgtatctga aaccaacgga ttattagata cgataacgtt gaagcaacgt
      661 atggagcctg ttgctgcagc acatggcgtt caaggtgtgt caatggattc tgcgaatgca
      721 gtcaacaaag gattggactt gtatttaaaa ggtttaatta ggtcttgttg tgaacttaaa
      781 cgggctcggt cagggtcaat ggtcaacggt gtgagatctg gtcaacattt tcaaacgcaa
      841 gtacatgaat caaaacgcaa gatatcagtg ctagacttta gagttgcaat ggagctaaat
      901 ccgaggcagc tcggggaaga ttggccaata ctgctcgagg aaatattcaa cttgtggtgt
      961 ttaatggtca acgtgggtcc catactggac gctagaacac cacatttatc agcaaccaac
     1021 caactgggag ttataaaagg aatggcttat gttggttgct gtgttgtatg a
//
LOCUS       XM_071830682             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            phosphatase 7 long form homolog (LOC139840412), mRNA.
ACCESSION   XM_071830682
VERSION     XM_071830682.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139840412"
                     /note="serine/threonine-protein phosphatase 7 long form
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840412"
     CDS             1..567
                     /gene="LOC139840412"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /protein_id="XP_071686783.1"
                     /db_xref="GeneID:139840412"
                     /translation="MAFIQARSIPVDESLLYLQSQRVHRSYAIFSGAIKPDEVIKPRR
                     CDQTFWGHISRLNGERIDNRVLQYLNLKGLGLVCKLGQQRVDHALITALVERWRPETH
                     TFHFRFGEATITLQDVQIMWGLLTDGEVVSGTWFKFPDQQWVGLVSEHLGITPQNIGE
                     RGIEKGKIRISTLIEELDRDLVDNIVGH"
     misc_feature    217..>402
                     /gene="LOC139840412"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 atggctttta ttcaagcgag atcaatcccc gttgatgaaa gtcttctata tttacaatct
       61 caacgcgttc ataggtctta tgcaattttt tcgggggcga ttaagccgga tgaggttatc
      121 aaacctagaa gatgtgatca gacattttgg ggtcatatta gtcgcctaaa tggggaaaga
      181 attgataatc gggtcttaca atatttgaat ttaaagggtt taggtctcgt gtgcaaactg
      241 ggacaacaaa gagtggatca cgctctcatc acagctttgg ttgaacgatg gcgtccggaa
      301 acgcatactt tccactttcg tttcggggaa gcaactataa cgttacagga tgtacaaatt
      361 atgtggggtt tacttactga cggtgaggtt gtatccggaa cgtggttcaa atttcccgat
      421 cagcaatggg tcggattagt tagtgaacat ttagggatta ctcctcaaaa tattggtgaa
      481 aggggtatag agaaaggaaa aattaggatt tcaactttaa tagaagagtt ggatagggac
      541 cttgtagaca atatagtggg tcactaa
//
LOCUS       XM_071830683            1347 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840414), mRNA.
ACCESSION   XM_071830683
VERSION     XM_071830683.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1347
                     /gene="LOC139840414"
                     /note="uncharacterized LOC139840414; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840414"
     CDS             1..1347
                     /gene="LOC139840414"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686784.1"
                     /db_xref="GeneID:139840414"
                     /translation="MYSTIAKSNGNNDKTIANMIIAGFTGQLKGWWDNYLKPEDHTVI
                     LNTVKTENNEVVTQAVYTLVVNIIEHFTGRWSDNSDTIRTLLNGLRCPTLTSFRWYKD
                     TFLSRVMELSDSNSNHWKSKLIDGLPSLFAERVRNSIRGNEASIRYENFTYGKLIGVC
                     VQEGHYANKCKVKKKINSLNINDELKEGLSRILLLSDNTDSENDISESDNGSIEENIQ
                     CLEDESLMSDTDCDCKNSISSDNEIYKIQAQFENLQISVLNKDTYNLIKDIKDSKSKI
                     KLIEKLLNEEASTSEPMDNLPNTQTYKMKKHYVNLPYEDDFDEKQIPTKARPCQMNSE
                     YLQLCKREIQSLMEKKLIRPSKSQWSCTAFYVNKHAEQERGVPRLDDLYNQQFIIRTD
                     CQSAKFMFTKDFKHDDSKQMFARWQAHLAPFDFQIIYKKGEENSIPDFLTREFLQE"
     misc_feature    <1144..1329
                     /gene="LOC139840414"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgtatagta ctattgctaa aagtaatgga aataatgata aaactattgc taatatgata
       61 atagcaggat ttacaggaca attaaaagga tggtgggata attatttaaa acctgaagac
      121 catactgtaa ttcttaatac tgttaagaca gaaaataatg aggttgttac ccaagctgtc
      181 tatactttag ttgttaatat aattgaacat tttacaggaa gatggtctga taattcagat
      241 actatcagaa cacttcttaa tggattaaga tgtccgactt taacttcatt cagatggtat
      301 aaagacacat ttttgtccag agttatggaa ctctcagatt ctaatagtaa tcattggaaa
      361 tcaaaattaa ttgatggtct acctagtctt tttgcagaaa gggttagaaa ttctataaga
      421 ggaaatgaag cctcaattag atatgaaaat tttacttatg ggaaactaat tggagtctgt
      481 gtccaagaag gtcattatgc aaataaatgc aaagtgaaaa agaaaataaa tagtcttaat
      541 ataaatgatg aattaaaaga aggtttatca agaattttac tactttctga taatacagat
      601 tcagaaaatg atataagtga atcagataat ggttcaattg aagaaaatat acagtgtctt
      661 gaagatgaat ctttaatgtc agacactgat tgcgattgta aaaattctat atcctctgat
      721 aatgagatat ataaaattca agctcaattt gaaaatcttc aaattagtgt tcttaataaa
      781 gacacttata atttaattaa ggatatcaaa gattcgaaat caaagattaa actaatagaa
      841 aaattattaa atgaagaggc tagtacttct gaaccaatgg ataatcttcc aaatactcaa
      901 acttataaaa tgaagaaaca ttatgtaaat cttccttatg aagatgattt tgatgaaaaa
      961 caaattccta caaaggcaag gccgtgtcaa atgaattctg aatacctgca attatgcaaa
     1021 agagaaattc agtccttaat ggagaaaaaa ttaataagac cttctaaatc ccaatggtct
     1081 tgtactgctt tttatgttaa taaacatgct gaacaagaaa ggggtgtacc tagacttgat
     1141 gatttatata atcaacaatt tataatcaga actgattgtc aatctgcaaa atttatgttt
     1201 acaaaagatt ttaaacatga tgattctaag caaatgtttg ctagatggca ggctcattta
     1261 gccccgtttg attttcaaat aatttacaag aaaggggaag aaaattctat tcctgatttc
     1321 ttaactagag aatttttgca ggaatga
//
LOCUS       XM_071830684             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840416), mRNA.
ACCESSION   XM_071830684
VERSION     XM_071830684.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139840416"
                     /note="uncharacterized LOC139840416; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840416"
     CDS             1..603
                     /gene="LOC139840416"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686785.1"
                     /db_xref="GeneID:139840416"
                     /translation="MPPKRNLNTGMSAAQIEEMVTQRVAEAVANTEAGRAANAANERR
                     PEVANVQQRCNYKAFMGCKPQSFSGTKGPVGLIRWLEKLESVFKISECTGNDRVKFAS
                     CTLLDGDLTWWNSFAKSVGIDVAYNTPWEEFKKLMINEYCPRNEIQRLETELWNLKLQ
                     GMDISGYTNRFLELALMCPTMVTPEYKRVERYIWGLSENI"
     misc_feature    295..594
                     /gene="LOC139840416"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
ORIGIN      
        1 atgcctccga agagaaatct aaacacggga atgagtgctg ctcagattga ggagatggta
       61 actcaaagag tagctgaagc agttgctaac actgaagcag gacgtgcagc aaatgctgcg
      121 aacgaaagga gacccgaagt ggcaaacgtt cagcagcgat gcaattacaa ggcatttatg
      181 ggttgcaagc cccagagttt ttcaggaacg aaaggacccg tagggttaat aagatggctt
      241 gaaaaactag aatcagtatt caaaatcagt gagtgcacag gcaatgatcg agtgaagttt
      301 gcatcatgta ctcttttgga tggagactta acctggtgga attcttttgc caaatctgtg
      361 ggtattgatg ttgcatataa tacaccatgg gaagaattca agaagttgat gatcaatgag
      421 tattgcccga ggaatgagat tcaaaggcta gaaactgagt tatggaactt aaagttacag
      481 ggaatggata tctcaggata tactaatcga tttcttgagt tagctttaat gtgcccaacc
      541 atggttactc ccgaatataa gagagttgag agatatattt ggggtctgtc agaaaacatt
      601 taa
//
LOCUS       XM_071830685             777 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840418), mRNA.
ACCESSION   XM_071830685
VERSION     XM_071830685.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..777
                     /gene="LOC139840418"
                     /note="uncharacterized LOC139840418; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840418"
     CDS             1..777
                     /gene="LOC139840418"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686786.1"
                     /db_xref="GeneID:139840418"
                     /translation="MEAQLKSPPLELTKRHWRRLLEYWTRDNVMEMTEKNKANMAKKK
                     LSQLMGNFFLQEFVSLGREPTRVDMFKECYSNRSGEGEAARAFEKMKKLTEKLGDGAT
                     DAPGPDDVFATIMGTAKNGTDEMYGLGVRTNHLWDAGPSRLAVNKENAQLMSKNAKNE
                     DENARLKALVEKNNGPGVQNDGSRVHDNGLGVQRLRVGKEVYIKSINFENVARGWLKS
                     MDPSTIVLGTEIGHDWCDVEDVTGTSIAWPAKLIELVHDD"
     misc_feature    46..405
                     /gene="LOC139840418"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
ORIGIN      
        1 atggaggctc aattaaagtc accacctcta gaactaacca aaagacactg gagaagactt
       61 cttgaatatt ggaccagaga taatgtgatg gagatgaccg aaaaaaacaa agccaatatg
      121 gctaaaaaga agttgtcaca attgatggga aatttttttt tgcaagaatt cgtgagtttg
      181 ggaagagaac caactagggt ggatatgttt aaggaatgtt attcaaatag aagtggtgaa
      241 ggtgaagctg ctcgtgcctt tgaaaaaatg aaaaaactta ctgagaaact cggtgatggt
      301 gcaactgatg cacctggacc agatgacgtt tttgccacta taatgggtac agctaaaaat
      361 ggtactgatg aaatgtatgg acttggtgtt cgcaccaatc atttgtggga tgcaggacct
      421 agtcgattag ctgttaacaa agaaaatgct cagctgatgt ctaaaaatgc aaaaaatgaa
      481 gatgaaaatg caaggttaaa agccctagtg gagaagaata atggtccggg tgttcagaat
      541 gatggttcgc gtgttcatga taatggttta ggtgttcaac gtttaagagt cggaaaggaa
      601 gtttatataa aaagcattaa cttcgagaac gtagcaagag gatggttgaa gagcatggat
      661 ccaagtacga ttgttttggg gacagaaatt ggacatgatt ggtgtgacgt cgaggacgtc
      721 actggtacgt ctattgcttg gcctgctaag ttaatcgagt tggtacatga tgattga
//
LOCUS       XM_071830686            1581 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840419), mRNA.
ACCESSION   XM_071830686
VERSION     XM_071830686.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1581
                     /gene="LOC139840419"
                     /note="uncharacterized LOC139840419; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840419"
     CDS             1..1581
                     /gene="LOC139840419"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686787.1"
                     /db_xref="GeneID:139840419"
                     /translation="MQSPRSKKDVQSLNGKLAALTRFLSRAADSALPFFHTLKGCLSK
                     KDFIWTDEAERAFQDVKAFLKELPALTAPIPGETLTVYLTASSEAIISVLISDRGKTQ
                     MSVYFVSKVLQDGEVNYPAMEKLIYALVHTARLLRQYFQTHPIQVFTDQPIKHVLTRP
                     EISGRMAKWAIELGEHGITFLLRHSVKGQVIADFLVELPSDMIKQGETTVTRRGMDEF
                     WKLYTDGASSEEGAGLGILLVSPNGEEITYAIRLKFAASNNEAEYEALISSLSLAKSI
                     DVRQLTAYVDSQLVASQLNGNFEARDTSMQKYLELTKALTNTFTTFEVKQIHRNRNKK
                     ADALSKLASLLYDHFTKKVMVEVLERKSTEEDTLMATITTEEECWMTPFIKYLADGTF
                     PEDKLQAHRIQMRAPMYYFKNGILYRKSFTEPYLRCVGPAQTKEIIRGMHEGACSTHS
                     GYRMIVSRIKRMGYFWPHMYRDTYDLIVNCEACQIHAPVNRSPRRNMIPIHAAWSFCK
                     WGIDIIGPFPRGVGNVNS"
     misc_feature    223..525
                     /gene="LOC139840419"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    655..1029
                     /gene="LOC139840419"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(670..681,769..777,784..786,856..858,976..978,
                     1018..1020)
                     /gene="LOC139840419"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    1285..1464
                     /gene="LOC139840419"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcagtcac ccaggagcaa aaaagacgtg caaagcctaa acgggaagct agcagcactc
       61 acaaggtttc tgtcacgagc cgccgacagt gccctcccct ttttccatac gttaaagggt
      121 tgtctgagca aaaaagattt catatggacg gatgaggccg agagggcctt ccaggatgtg
      181 aaggcattct taaaagagct gccagcatta acggcaccta taccgggtga aaccctcacg
      241 gtatacctta ccgcctcctc tgaggcaatc atctcggtcc taatttccga taggggtaaa
      301 actcaaatgt cggtgtactt tgtaagcaaa gtattgcaag acggggaagt aaactacccg
      361 gccatggaaa aactaattta cgctttagta cacacagcca gactgctacg gcaatatttt
      421 caaacacatc cgatacaagt ctttacggac caaccaatca aacacgtcct gaccaggccg
      481 gaaatctccg gaagaatggc gaaatgggca atagaactcg gagagcacgg aatcactttc
      541 ctcctgagac attcggtcaa gggccaagtc atagcagact tcctggtaga gctcccttcc
      601 gacatgatca agcaaggcga aaccacagtt acaagaagag ggatggacga attctggaaa
      661 ctatatacgg acggggcgtc aagtgaggag ggggctggct taggcatact cctcgtttcc
      721 ccaaacggag aagaaataac ttacgctatc cggttgaagt tcgccgcctc aaacaacgag
      781 gccgaatacg aagcactaat atccagttta agcttggcta aaagtattga cgtacgacaa
      841 ctcacagctt atgtcgactc acaactggta gcaagccagc taaacggcaa cttcgaagca
      901 agagatacat cgatgcaaaa atacctagaa cttacaaagg cactaaccaa caccttcacg
      961 acgtttgaag taaaacaaat acatcgtaac cgcaacaaga aagcagatgc tttgagcaag
     1021 cttgcctctt tgttatacga tcactttacc aaaaaagtta tggttgaagt actggaaaga
     1081 aagtcaactg aagaggatac cctcatggcg acaatcacaa cagaagaaga atgttggatg
     1141 acacccttca taaaatacct tgccgatggt accttcccgg aagacaaatt acaagctcat
     1201 aggatacaaa tgcgggcacc aatgtattat tttaaaaacg gcatcctata caggaaatcg
     1261 ttcacggagc cttacttaag gtgcgttggc ccggcacaga ccaaagagat aatacgagga
     1321 atgcatgagg gagcctgctc aacgcactcc ggctaccgaa tgatagttag caggatcaag
     1381 agaatgggtt atttctggcc acacatgtac cgagatacgt atgacctgat cgtaaactgc
     1441 gaggcatgcc aaatacacgc tccagtcaac agatcccctc gtcgaaacat gattcccata
     1501 cacgccgctt ggtcattctg caaatggggg atcgacatca tcggcccatt cccacggggt
     1561 gtcggtaacg ttaattccta g
//
LOCUS       XM_071830687            1060 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840420), mRNA.
ACCESSION   XM_071830687
VERSION     XM_071830687.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1060
                     /gene="LOC139840420"
                     /note="uncharacterized LOC139840420; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840420"
     CDS             134..1060
                     /gene="LOC139840420"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686788.1"
                     /db_xref="GeneID:139840420"
                     /translation="MESKTIEKMEEEEEEEEEVQTFKTGALALPIIQSLLDAPQAFFA
                     LVLSPTRELAIQIAERFEALGSSIGVKSAVLVGGVDQLQQSIQLGKRPHIVVATPGCL
                     VENLSNTKGISLRTVKYLVFDEADRLLNVDFEKFLNERRTYLFSATTITKKIEADSKY
                     STVVTLKQLPDKHKDEEVIEFFLGFMDDHYPVRRAFSLSNQVLDLLDEYQKNFDDSLK
                     GVQADSSQPCPSLKEALTRFQHKTIIDSVLVTGENLDTLVEKSIKLSMAFQVVGSLRA
                     QQLSPGMPLEFCLQGLLALLFEATTSVDFVAS"
     misc_feature    <200..598
                     /gene="LOC139840420"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    524..847
                     /gene="LOC139840420"
                     /note="Longin-like domains; Region: longin-like; cl38905"
                     /db_xref="CDD:365781"
     misc_feature    <851..>943
                     /gene="LOC139840420"
                     /note="SNARE motif; Region: SNARE; cl22856"
                     /db_xref="CDD:473982"
     misc_feature    order(872..874,893..895,902..904)
                     /gene="LOC139840420"
                     /note="flanking leucine-zipper layers; other site"
                     /db_xref="CDD:277220"
     misc_feature    881..883
                     /gene="LOC139840420"
                     /note="zero layer [active]"
                     /db_xref="CDD:277220"
ORIGIN      
        1 ttccccaaat ataataaacc ctaaaaccct ttacttgaac gtagatttcc aatcatcaat
       61 ttgtgtttca caatttttgc aatccgcgaa ctacattgta attcatcaca gaaccataat
      121 ttcgtcgtct tatatggaat ctaaaacgat tgaaaaaatg gaagaagaag aagaagaaga
      181 ggaagaggtg caaactttta aaacgggagc tttagccttg ccaataattc aatcattatt
      241 ggatgctcca caggcattct ttgctttagt gctttctccc acaagggaac ttgcaattca
      301 gattgctgaa cggtttgagg cattgggatc aagcattggt gttaagtctg cggtgcttgt
      361 tggaggggtt gaccaactac aacaaagcat tcaacttgga aagcgaccac atattgtcgt
      421 tgccacgcct ggatgcctgg tggaaaattt atcaaatact aaaggcattt ctcttcgtac
      481 cgtcaagtac ttggtgtttg atgaggcaga taggttgcta aatgtggatt ttgagaaatt
      541 cctcaatgag agaagaacat acctgttttc tgctactact attaccaaaa agattgaagc
      601 cgattctaaa tattctactg ttgttacctt gaaacagctt cctgataagc acaaggatga
      661 agaagttata gaattttttt tgggctttat ggatgatcat taccctgttc gaagagcgtt
      721 ttctctttca aaccaagtat tagatcttct agatgaatat cagaagaact ttgatgattc
      781 gttgaaaggg gtgcaagctg attccagtca gccatgtcct tccttaaaag aagctttgac
      841 cagatttcag cacaagacta tcatcgatag tgtccttgta acaggtgaaa atctggacac
      901 tttagttgag aaaagtatca aactcagtat ggcttttcag gtggttggct ctttgcgtgc
      961 gcaacaactc tcacctggca tgcctctcga gttttgttta caaggtcttt tggctctact
     1021 attcgaggca acaacaagcg tcgattttgt ggcgtcttga
//
LOCUS       XM_071830689            1287 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pelargonidin
            3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside)
            4'''-malonyltransferase-like (LOC139840422), mRNA.
ACCESSION   XM_071830689
VERSION     XM_071830689.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1287
                     /gene="LOC139840422"
                     /note="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 48 Proteins"
                     /db_xref="GeneID:139840422"
     CDS             1..1287
                     /gene="LOC139840422"
                     /codon_start=1
                     /product="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like"
                     /protein_id="XP_071686790.1"
                     /db_xref="GeneID:139840422"
                     /translation="MKLSKQSSTFIKPFVPTPETHRHFKLGFIDELTILCNVKVILFF
                     SPISDQNRNFVVGLEKSLEKTLTRLYPLAGRYVDEPQIVECNDEGVEFIHAEVNIKFQ
                     EIHGSGMDPNLVDKFISFNTRAAHKLTDPLLSIQVTKFECGGVAVGVSATHKIVDAST
                     LCTFLNVWAAINREENEFEFSGACFNSSSLFPARGLRSTDIPTISDDMLSKYTRKKYS
                     FSESEISNIRAKAAFASGDTSIRRWSKVQLAIAILSKAFIDLDRAINKYPRESVVVQP
                     MNLRGKMASLIPKHSCGNLLTFCITKSGIFETTIELADVISDAIKKAVNNYSKLHHDT
                     EEGKSMVWDSVLEMAKIPKSTHLIGIGSWCGFPFYEANFGFGKPIWVAPGTVPMENAT
                     YLLDDAGGNGVEAHVFLEVNDVPIFEKSLNANALRA"
     misc_feature    1..1257
                     /gene="LOC139840422"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgaagcttt caaaacaatc aagcacattc ataaaacctt ttgtcccaac ccctgaaacc
       61 catcgtcact ttaagttagg cttcatcgat gagctaacta ttttatgtaa cgtgaaagtc
      121 attcttttct tctccccgat tagtgatcag aataggaatt ttgtagttgg gttagaaaaa
      181 tcccttgaaa aaaccttaac aagattatac cctcttgcgg gtagatacgt tgatgaacct
      241 caaatcgttg agtgtaatga tgaaggtgtt gaatttatac atgccgaagt taatattaaa
      301 tttcaagaaa ttcatgggtc cggaatggat cctaatttgg ttgataagtt catttcattc
      361 aatactcgtg cggctcataa gttgactgac cccttacttt caatacaagt tactaaattt
      421 gagtgtggag gggtagcagt tggtgtaagc gctacacaca agattgtaga tgcgtccact
      481 ttgtgtacat tcctaaatgt ttgggctgcc ataaaccgag aggaaaatga gtttgaattc
      541 tcaggggcat gtttcaactc atcgtccctg tttcctgcac gtggcctacg ttctacggat
      601 ataccaacta ttagcgatga tatgttgagc aagtatacaa gaaagaaata ttcattcagt
      661 gagagtgaaa tatcaaacat tagagcaaaa gctgcattcg caagtggaga tactagcatc
      721 cgtcgttggt ctaaggtaca gttggcaata gccatccttt caaaggcttt cattgatttg
      781 gatcgtgcga taaataaata tccaagagag tctgtagtcg tgcagccaat gaatctaaga
      841 gggaaaatgg catccctaat tcctaagcat tcttgtggga atcttttgac attttgcatc
      901 acgaaatctg gtatatttga aactaccatt gagttggcag atgttataag cgatgcaatc
      961 aaaaaggccg ttaataacta ctcaaaatta caccacgata ccgaagaagg aaaatcgatg
     1021 gtttgggatt ccgttttaga gatggccaag attcccaaat ctactcattt gattggaatt
     1081 ggtagttggt gcggattccc tttttatgaa gctaactttg gctttggaaa accaatttgg
     1141 gttgcccctg ggacggtacc aatggaaaac gcaacatatt tgttggatga tgcaggagga
     1201 aatggagtag aagcacatgt ctttttggaa gttaacgacg tccctatttt tgaaaaaagt
     1261 ctgaatgcca atgctttacg tgcataa
//
LOCUS       XM_071830690            1330 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pelargonidin
            3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside)
            4'''-malonyltransferase-like (LOC139840423), mRNA.
ACCESSION   XM_071830690
VERSION     XM_071830690.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1330
                     /gene="LOC139840423"
                     /note="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139840423"
     CDS             1..1284
                     /gene="LOC139840423"
                     /codon_start=1
                     /product="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like"
                     /protein_id="XP_071686791.1"
                     /db_xref="GeneID:139840423"
                     /translation="MMKIEKQSSSFIKPLFLTPQIHRHHNFGSLDEVAPFVTVDVVLF
                     FSPIKDQVGKFVVGLEKSLEKTLTQFYPLAGRYVDETQIVECNDEGVEFIHAKANTKL
                     QEIFASEMYPILVDEFVSFRTGVTHKLTDPLLIIQVTKFECGGLALGVSATHKLVDAS
                     TLCTFLNHWAAINREENEIEFSGPGFNSSSLFPARGLRRRVRPTINDDMVSKFTRKKY
                     SFSESEILNIKANTAVASGNISPSRWSKVQLVMAIVAKAFIDVDRVRNKYSRESMVVQ
                     PVNLRGKMKSLIPMNSCGNLVTYCATKSGIFETTIELADVISDSVKNTLNNLSKVHHD
                     TEEGASMVLNFMSQKAPESTHLIGMASWCKFPFYEANFGFGKPIWVAPGAIPRKNSAH
                     LMDDPKGDGIEAHAFLEVNDVSIFEESLNANAFRA"
     misc_feature    4..1254
                     /gene="LOC139840423"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgatgaaga ttgaaaaaca atcaagctca ttcataaaac ctttattctt aacccctcaa
       61 atccatcgtc accataactt cggatccctc gatgaagtag ctccttttgt gactgtagat
      121 gtagttcttt tcttctctcc aatcaaggat caagttggaa agtttgtagt tgggctagaa
      181 aaatcccttg agaaaacttt aacgcaattt taccctcttg ccggtagata tgttgatgaa
      241 actcaaatcg ttgagtgtaa cgatgaaggc gttgagttta tacacgccaa agctaacacg
      301 aaacttcaag aaatatttgc atcagaaatg tatcctatat tggttgatga atttgtttcc
      361 tttagaacag gtgtgactca taagttgact gaccccttac ttataataca agttactaaa
      421 ttcgagtgtg gagggttagc ccttggtgta agtgctacac acaagcttgt tgatgcgtcc
      481 actttgtgta cattcttgaa tcactgggct gctataaacc gagaagaaaa tgagattgaa
      541 ttctcaggcc ccggtttcaa ctcatcgtca ctgtttccag ctcgtggtct acgtcgtaga
      601 gttcgaccaa ctatcaacga tgatatggta agcaagttta cgagaaagaa atattcattc
      661 agtgagagtg aaatattaaa tattaaagca aacactgcgg tcgcaagtgg aaatattagc
      721 cccagtcgtt ggtcaaaggt acagttggtg atggccatcg tagcaaaggc gttcattgat
      781 gtggatcgcg tgagaaacaa atattcaaga gagtctatgg tagtacaacc agttaatcta
      841 agggggaaaa tgaaatccct tattcctatg aattcttgtg ggaatcttgt gacatattgt
      901 gccacgaaat ctggtatatt tgaaactacg atagagttgg cagatgttat aagtgattcc
      961 gtcaagaata ctctaaataa cttgtcgaaa gtacaccatg acacagaaga aggagcatct
     1021 atggttttaa atttcatgtc tcaaaaagct cctgaatcta ctcatttgat tggtatggct
     1081 agttggtgca agttcccttt ctatgaagct aactttggtt ttggaaagcc aatttgggtt
     1141 gccccagggg caataccacg aaaaaattca gcacatttga tggacgatcc gaaaggagat
     1201 ggaatcgaag cacatgcctt tttggaagtt aacgacgtct ctatttttga agaaagtctg
     1261 aatgcaaatg cttttcgtgc ttaagggttt atatctttcg cttgtttggt catttgattt
     1321 taatgtaaga
//
LOCUS       XM_071830691             999 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pelargonidin
            3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside)
            4'''-malonyltransferase-like (LOC139840424), mRNA.
ACCESSION   XM_071830691
VERSION     XM_071830691.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 66% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..999
                     /gene="LOC139840424"
                     /note="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139840424"
     CDS             1..999
                     /gene="LOC139840424"
                     /codon_start=1
                     /product="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like"
                     /protein_id="XP_071686792.1"
                     /db_xref="GeneID:139840424"
                     /translation="MMKISKQSSTFIKPYVPTPQTHRHYRLSLFDEVVPFWNVKAILF
                     FSPISGQIRKFIVGLETSLAKTLTHLYPLAGRYVDETQIVECNDEGVEFIHAEVNIKL
                     QEILGSVMDSKMVDEFISLNTRAAHKLTDPLLSIQVTKFECGVVASKVQLVMAILSKA
                     FIDLDRAINKHPRESIVMQPMNLRGKMASLIPKHSCGNLLAYCIKKSGIFETTIELAD
                     VINDSIKKAVNNYSKVHHDTEEGKSMVWDSILQMANIAESTHVIGFTSWCKFPFYEAN
                     FGFGKPIWVAPGTVPLKNSAYLMDDAGGNGVEAHVFLEVNDVPMFEKSQNANALRS"
     misc_feature    4..975
                     /gene="LOC139840424"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgatgaaga tttcaaaaca atcaagcaca ttcataaaac cttacgtccc aacccctcaa
       61 actcatcgtc attataggtt aagcttattc gacgaggtag ttcctttttg gaatgtaaag
      121 gccattcttt tcttctcccc gattagtggt cagattagaa agtttatagt tgggctagaa
      181 acatcccttg cgaaaacctt aacacattta taccctctag ccggtagata tgttgatgaa
      241 actcaaatcg ttgagtgtaa tgatgaaggt gttgagttta tacacgctga agttaacatt
      301 aaacttcaag aaattcttgg atcggtaatg gattctaaaa tggttgacga attcatttca
      361 ctcaatactc gtgcggctca taagttgacc gacccattac tttcaataca agttactaaa
      421 tttgagtgtg gagtggtagc ttccaaggta cagttggtaa tggccatcct ttcaaaggct
      481 ttcattgatt tggatcgtgc gataaataaa catccaagag agtctatagt catgcaacca
      541 atgaatctaa gggggaaaat ggcatcccta attcctaagc attcttgtgg gaatcttttg
      601 gcttactgta tcaagaaatc tgggattttt gaaactacca ttgaattggc ggatgttata
      661 aacgattcaa tcaagaaggc tgtaaataac tactcaaaag tacaccatga tacagaagaa
      721 ggaaaatcta tggtttggga ttccatttta cagatggcca acattgcgga atctactcat
      781 gtgattggat ttactagttg gtgcaagttt cctttttacg aagctaactt cggctttgga
      841 aaaccaattt gggttgctcc tgggacagta ccactgaaaa actcagcata tttgatggat
      901 gatgcaggag gtaatggagt tgaagcacat gtctttttgg aagttaacga cgtccctatg
      961 tttgaaaaaa gtcaaaatgc taatgcttta cgttcttaa
//
LOCUS       XM_071830692             633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vinorine synthase-like
            (LOC139840425), mRNA.
ACCESSION   XM_071830692
VERSION     XM_071830692.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..633
                     /gene="LOC139840425"
                     /note="vinorine synthase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 36
                     Proteins"
                     /db_xref="GeneID:139840425"
     CDS             1..633
                     /gene="LOC139840425"
                     /codon_start=1
                     /product="vinorine synthase-like"
                     /protein_id="XP_071686793.1"
                     /db_xref="GeneID:139840425"
                     /translation="MMMKLSKQLSIFIKPLVPTPQTHRHYKLGLIDEIAFFWNVNVVL
                     FFPPISYQNRKFVVGLEKSLEKTLTRLYPLAGRYIDETQIVECNDEGVEFIHAKVNIK
                     LQEIIGSEMDPKLVDEFISFNSRAAHKLTGPLLSIQVTKFECGGVAVGVSATHKIVDA
                     STLCTFLNVWAAINREENEFEFSGACFNSSTLLPARGLRPINIPTISGDL"
     misc_feature    7..>600
                     /gene="LOC139840425"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgatgatga agctttcaaa acaattaagc atattcataa aacctttagt cccaacccct
       61 caaacccatc gtcactataa gttaggcctc atcgatgaga tagctttttt ttggaatgtg
      121 aatgtcgttc ttttcttccc accgattagt tatcagaata ggaagtttgt tgttgggtta
      181 gaaaaatccc ttgagaaaac cttaacacga ttataccctc ttgctggtag atatattgat
      241 gaaactcaaa tagttgagtg taacgacgaa ggtgttgaat ttatacacgc caaagttaac
      301 atcaaacttc aagaaattat tggatctgaa atggatccta aattggttga tgaattcatt
      361 tcattcaata gtcgtgcggc tcataagttg accggcccat tactttcaat acaagttact
      421 aaatttgagt gtggaggggt agcagttggt gtaagcgcta cacacaagat tgttgacgcc
      481 tccactttgt gtacattcct aaatgtttgg gctgctataa atcgagaaga aaatgagttt
      541 gaattctcag gggcatgttt caactcgtca acgctgttac ctgctcgtgg tcttcgtcct
      601 ataaatatac caactattag cggtgatttg tga
//
LOCUS       XM_071830693             480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pelargonidin
            3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside)
            4'''-malonyltransferase-like (LOC139840426), mRNA.
ACCESSION   XM_071830693
VERSION     XM_071830693.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..480
                     /gene="LOC139840426"
                     /note="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139840426"
     CDS             1..480
                     /gene="LOC139840426"
                     /codon_start=1
                     /product="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like"
                     /protein_id="XP_071686794.1"
                     /db_xref="GeneID:139840426"
                     /translation="MRAKAAFASGNTGTRRWSKVQLVMAILSKAFIDLDRAINKYPRE
                     CIVMQPMNVREKMASLIPKHSCGNLLAYCFTKSGIYETTIELADVISDSVIKAVNNFS
                     KVHHDTEEGKSMVLDSILEMANIPISTHLIAFSSWCKFPFYEANFGFGKPIWAALGQ"
     misc_feature    <1..462
                     /gene="LOC139840426"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgagagcaa aagctgcatt cgcaagtgga aatactggca ctcgtcgttg gtccaaggta
       61 caattggtaa tggccatcct ttcaaaggct ttcattgatt tggatcgcgc gataaacaaa
      121 tatccaagag agtgtatagt catgcaacca atgaatgtta gggaaaaaat ggcatcccta
      181 attcctaagc attcttgtgg gaatcttttg gcatattgtt tcacaaaatc tggtatttat
      241 gaaactacca tagagttggc agatgttata agtgattcag tcataaaagc tgtaaataac
      301 ttctcaaaag tacaccacga taccgaagaa ggaaaatcaa tggttttgga ttcgatttta
      361 gagatggcca atattccaat atctactcat ttgattgcat tcagtagttg gtgcaagttc
      421 cctttttatg aagctaactt tggcttcgga aagccaattt gggccgccct gggacagtag
//
LOCUS       XM_071830694            1290 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pelargonidin
            3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside)
            4'''-malonyltransferase-like (LOC139840427), mRNA.
ACCESSION   XM_071830694
VERSION     XM_071830694.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1290
                     /gene="LOC139840427"
                     /note="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 47 Proteins"
                     /db_xref="GeneID:139840427"
     CDS             1..1290
                     /gene="LOC139840427"
                     /codon_start=1
                     /product="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like"
                     /protein_id="XP_071686795.1"
                     /db_xref="GeneID:139840427"
                     /translation="MKISKQSSTFIKPFVPTPQTHHRYKLGFLDEVAPFWNVDVVLFF
                     SPICDQNRKFVVGLEKSLEKTLTRLYPLAGRYVDETQVIECNDEGVEFIHAKVNIKLH
                     EFLELETDTRLVDEFISFKTRGAHNLTGPLLSIQVTKFECGGVAVGVRATHKIVDAST
                     LCTFLNVWAAINREENEIKFSWSGFNSSSIFPARGLRAIDVPTISGDMLAKFTRKSFS
                     FTEYEISKIRANAAFASGNVNSRHWSKVQLVMAILSKAFIDVDRAVYKYSRESMVMQT
                     INLRGKMASLIHKNSCGNLWAYCFTKSGNFETTIELADVISDSVKKALNNYSKVHHDT
                     EEGKSMVWDPILMMANFNPESTHLIGITSWCKFSFYEANFGFGKPIWVAPGTVPLKNV
                     VTLMDDASGNGVVAHVLLENIDVPIFEESLNTNALRA"
     misc_feature    1..1260
                     /gene="LOC139840427"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgaagattt caaaacaatc aagcacattc ataaaacctt ttgtcccaac ccctcaaact
       61 catcatcgct ataagttagg cttcctcgac gaggttgctc ctttttggaa tgtagatgtc
      121 gttcttttct tctcaccgat ttgtgatcag aatagaaagt ttgttgttgg gctagaaaaa
      181 tcgctagaga agaccttaac gcgattatac cctcttgccg gtagatatgt tgatgaaact
      241 caagtcattg agtgtaatga tgaaggcgtt gagtttatac acgccaaagt taacatcaaa
      301 cttcatgaat ttcttgaatt ggaaacggat actagattgg ttgatgagtt catttcattt
      361 aaaactcgtg gggctcataa tttgactggc cctttacttt caatacaagt tactaaattc
      421 gagtgtggag gagtagcagt tggtgtaaga gctacacaca agattgttga cgcgtccact
      481 ttgtgtacat tcttaaatgt ttgggctgct ataaaccgag aagaaaatga gatcaaattc
      541 tcatggtccg gtttcaactc atcatccata tttcctgctc gtggtctacg tgctattgat
      601 gtaccaacta ttagcggtga catgttagcc aaatttacaa gaaagagttt ttccttcact
      661 gagtatgaaa tatcaaaaat tagagcgaac gctgcattcg caagtggaaa tgttaactcc
      721 cgtcattggt caaaggtaca attggtaatg gccatccttt caaaggcttt cattgatgtg
      781 gatcgcgcag tttataaata ttcaagagag tctatggtaa tgcagacgat aaatctaagg
      841 gggaaaatgg catccctaat tcataaaaac tcttgtggca atctttgggc ctattgcttc
      901 acgaaatctg gtaattttga aactactata gagttggcag atgttataag tgattcggtt
      961 aagaaagctt taaataacta ctcaaaagtg caccacgata ccgaagaagg aaaatcgatg
     1021 gtttgggatc ctattttaat gatggctaac tttaatcctg aatctactca tttaattgga
     1081 ataactagtt ggtgcaagtt ctctttttat gaagctaact ttggcttcgg aaagccaatt
     1141 tgggttgccc cagggacagt accgctgaaa aatgtagtaa ctttgatgga cgacgcaagt
     1201 ggtaatggag tcgtagcaca tgttcttttg gaaaatatag acgtacctat ttttgaagaa
     1261 agtctgaata ctaatgcgtt acgtgcttaa
//
LOCUS       XM_071830695             474 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840428), mRNA.
ACCESSION   XM_071830695
VERSION     XM_071830695.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..474
                     /gene="LOC139840428"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840428"
     CDS             1..474
                     /gene="LOC139840428"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686796.1"
                     /db_xref="GeneID:139840428"
                     /translation="MKHLSTEFGMKHLGGLSYFLGFSAAHTETDPLLNQSKYAHEILD
                     KADMLFCKSENTSTDTNSWLSSHAGAPYSDPMYYRSLVGALQYLTFTQPNIAYAVQQI
                     CLHMHAPFHGHMGVLNRILRYVQGTIHFHLHMYRSTSHNLRSYTDTDWAGYTDTR"
ORIGIN      
        1 atgaagcatt tgtccactga gtttggcatg aaacatttag gtgggttgag ttatttctta
       61 ggtttttctg ctgcacatac tgagactgat cccctcttaa atcagtctaa atacgcccat
      121 gagattcttg ataaagcaga tatgttattc tgcaaatcgg aaaatacatc gactgacact
      181 aactcatggt tgagttcaca tgctggtgca ccatattctg atcctatgta ctatcgaagc
      241 ctcgttggtg cattacaata cttgacgttt actcagccta atatcgccta tgccgttcaa
      301 caaatttgtc ttcacatgca tgcacctttt catggtcaca tgggcgtttt aaaccgcatt
      361 ctccggtatg ttcaaggaac tatccatttt catttacata tgtaccgatc cacatctcat
      421 aatttgagat cttacaccga tacggactgg gcaggctata cagacactcg atga
//
LOCUS       XM_071830696            1263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pelargonidin
            3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside)
            4'''-malonyltransferase-like (LOC139840429), mRNA.
ACCESSION   XM_071830696
VERSION     XM_071830696.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1263
                     /gene="LOC139840429"
                     /note="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 47 Proteins"
                     /db_xref="GeneID:139840429"
     CDS             1..1263
                     /gene="LOC139840429"
                     /codon_start=1
                     /product="pelargonidin 3-O-(6-caffeoylglucoside)
                     5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like"
                     /protein_id="XP_071686797.1"
                     /db_xref="GeneID:139840429"
                     /translation="MTKIEKQSNTFIKPIIPTPPTHHHYKLGSLDELAPFWNVSVVLF
                     FSQVNDQDQKFVVGLETSLEKTLTLLYPLAGRYVDETQIIDCNDEGVEFIHAKVNIKL
                     QEILGSEMDPKLVDEFISFNTLAAHKLTSPLLSIQVTKFECGGVAIGVNATHKIVDAS
                     TLCTFLNVWAVINRENNEIEFSGPGFNSSSLFPARGIRRRTQPTISDDMLRKCTRKKY
                     LFSESDISNIRANTTIASLSKVQLVMAILSKAFIDVDRAINKYSRECIIVHPMNIREK
                     MASLIPSNSCGNLVAFCATKTDIYETTIELADVISESFKKSVNNLSKVHHDTEEGKCM
                     VLDSMCQKVPESTHMIGISSWCKFPFYEVNFGFGKPIWAAPGTIPQKNSANLMDDARG
                     NGIEAHVFLEVNYIPIFEESLKANVYRV"
     misc_feature    7..1233
                     /gene="LOC139840429"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgacgaaga ttgaaaaaca atcaaacaca tttataaaac ctataattcc aacccctcca
       61 acccatcatc actataagtt aggcagcctc gacgagctag ctcctttttg gaatgtatcc
      121 gtcgttcttt tcttctccca agttaatgat caggatcaaa agtttgtagt tgggctagaa
      181 acatcccttg aaaaaacgtt aacactatta tatcctcttg ccggtagata tgttgatgaa
      241 actcaaatca tcgactgtaa tgatgaaggg gttgagttta tacacgcgaa agtcaacatc
      301 aaacttcaag aaattcttgg atcagaaatg gatcctaaat tggttgatga attcatttca
      361 ttcaatactc ttgcggctca taagttgact agccctttac tttcaataca agttactaaa
      421 ttcgagtgtg gaggagtagc aattggtgta aacgctacac acaagattgt tgacgcgtca
      481 actttgtgta cattcttaaa tgtttgggct gttataaacc gagaaaataa tgagattgaa
      541 ttctcagggc ctggtttcaa ctcatcgtca ctttttccgg ctcgtggtat acgccgtaga
      601 actcaaccaa ctatcagcga tgatatgtta agaaagtgta caaggaagaa atatttgttc
      661 agtgagagtg acatatcaaa tattagagca aacactacaa tcgcaagttt gtcaaaggta
      721 cagttggtga tggccatcct ttcgaaggct ttcattgatg tggatcgcgc gataaacaaa
      781 tattcaagag agtgtataat agtacatcca atgaatataa gggaaaaaat ggcatcctta
      841 attccttcga actcttgcgg gaatcttgtg gcgttttgtg ccacgaaaac tgatatttat
      901 gaaactacca tagagttggc agatgttata agtgagtcat tcaagaaaag tgtaaacaac
      961 ttgtcaaaag tacaccatga tacagaagaa ggaaaatgca tggttttgga ttccatgtgt
     1021 cagaaagttc ctgaatccac tcatatgatt ggaatttcta gttggtgcaa gttccctttt
     1081 tatgaagtta attttggctt tggaaagcca atttgggctg cacctggaac catacctcag
     1141 aaaaattcgg caaatttgat ggacgatgca cgaggtaatg gaatcgaagc acatgtcttt
     1201 ttggaagtta actacatccc tatatttgaa gaaagtttga aggccaatgt ttaccgtgtt
     1261 taa
//
LOCUS       XM_071830697             495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840430), mRNA.
ACCESSION   XM_071830697
VERSION     XM_071830697.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139840430"
                     /note="uncharacterized LOC139840430; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840430"
     CDS             1..495
                     /gene="LOC139840430"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686798.1"
                     /db_xref="GeneID:139840430"
                     /translation="MAKTYFVDCKTRAFKKTWDLLSFSRIPVKFELDKRGINLNSVRC
                     PICDGDIETVEHILFSCQMAKDIWAKVLKWWGYNSALFGYEDIFNGTFDSVAHDHKRN
                     QWQAVCWVVCYIIWKNRNAKVFKNKLETVPSLFSEVQVLSYDWISRRCKGHIMDWLQW
                     FSQP"
     misc_feature    <49..201
                     /gene="LOC139840430"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggctaaaa cttactttgt agactgtaaa acacgtgctt ttaagaaaac atgggacctt
       61 ttatcttttt cacgtatacc ggtaaagttc gagttagata aacggggcat caatttgaac
      121 agcgtgagat gcccgatttg tgatggtgac attgagacgg tggaacatat acttttttct
      181 tgtcaaatgg ccaaagacat atgggcgaaa gtccttaaat ggtgggggta taattcggct
      241 ttattcgggt atgaggatat ttttaatggt accttcgaca gcgtagcaca tgatcacaaa
      301 aggaaccaat ggcaagcggt ttgttgggtg gtttgttaca ttatatggaa gaatcgaaat
      361 gcaaaggtgt tcaagaataa gctcgagacg gtcccatctt tatttagcga ggttcaagtt
      421 ctttcatacg attggatttc acgacgttgc aagggtcata ttatggattg gcttcaatgg
      481 ttctcacaac cttag
//
LOCUS       XM_071830698            1557 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450 94B3-like
            (LOC139840431), mRNA.
ACCESSION   XM_071830698
VERSION     XM_071830698.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1557
                     /gene="LOC139840431"
                     /note="cytochrome P450 94B3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139840431"
     CDS             13..1557
                     /gene="LOC139840431"
                     /codon_start=1
                     /product="cytochrome P450 94B3-like"
                     /protein_id="XP_071686799.1"
                     /db_xref="GeneID:139840431"
                     /translation="MFFHCFHFLSLLFVLFYLFSLLRILIASTSSTITATRTTTSTNN
                     NGNKSYPFIGCLISFHRNSHRLIHWFTDLLKVSPSQTIVLHRFGRKSQMIVTANPNNV
                     EHILKTNFENYPKGKPFTDLLGDFLGMGIFNVDGDLWSTQRKLASHEFSTKSLREFEV
                     SVLEEEVSKRLIPLLEKSVQNNDVLDMQDVFRRLAFDTICKISLGWDPCFLDYTKPVP
                     LLASAFDLAAGASAMRGVALANWVWKAKRLLTIGSERKLKEAVGIVHREVDDIIRERR
                     QQMAGNESRRDLLSMFISAGHDDELVRDMVISFLMAGRDTTSAAMTWLLWLLTWHPTI
                     EKNVIKDVTYMTNDENKSSLNFDDLKKMDYLKACLFESMRLYPPVVWDSKHAKHDDVL
                     PDGTRVYKGNRVMYFPYGMGRMETLWGKDCLEFRPDRWFSELGDFKMESPYKFPVFQG
                     GPRVCLGKEMAIMQMKYVMASILTRFDFVPVCSDQPVFVPMLTAHMDGGLKVRVRRRI
                     DVCDQL"
     misc_feature    250..1512
                     /gene="LOC139840431"
                     /note="cytochrome P450 family 86, subfamily A; Region:
                     CYP86A; cd11064"
                     /db_xref="CDD:410687"
     misc_feature    order(427..429,439..441,460..462,607..609,934..939,
                     946..951,958..963,970..972,1129..1131,1156..1158,
                     1162..1164,1234..1236,1351..1359,1369..1383,1390..1395)
                     /gene="LOC139840431"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410687"
     misc_feature    order(691..696,934..936,943..948,958..960,1150..1161)
                     /gene="LOC139840431"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410687"
ORIGIN      
        1 cactttacaa ccatgttttt tcattgtttc cattttcttt ctctactatt tgtacttttt
       61 tacttgtttt ctttacttag aatcttaata gcatcaactt cttccaccat caccgccacc
      121 aggaccacca cgagtaccaa taataatggt aataagtcat atcctttcat tggatgccta
      181 atttcgtttc accgaaatag ccatcggttg atccattggt tcacggacct tctcaaagta
      241 tcgccatcac aaacgattgt tttacatcgc tttgggcgaa aaagtcaaat gatagtcaca
      301 gcaaacccta ataacgtcga acacattctc aaaacaaact ttgaaaacta ccctaaaggg
      361 aaacccttta cggatctcct tggggacttt cttggaatgg gaatatttaa tgtcgacggc
      421 gatctatgga gtacgcaaag aaagttagct agccatgagt ttagcacaaa atcgctacgt
      481 gaatttgagg ttagtgttct tgaagaagaa gtatcgaaaa gacttattcc attgctagag
      541 aagtcggttc aaaataatga tgttttggac atgcaagatg tttttagaag gttagctttt
      601 gataccatat gtaaaatttc acttgggtgg gacccttgtt ttttggatta tactaagcct
      661 gttccgctgc tagcgtcagc ttttgactta gcagcaggag ccagtgcaat gcgtggcgtt
      721 gcactggcca attgggtgtg gaaagcaaag agattattga ccattggaag tgaaagaaag
      781 ttaaaagaag cggtggggat tgtacatcgt gaagtagatg acataattcg cgagcgaaga
      841 caacaaatgg cgggaaatga aagtcgaaga gatttgttat cgatgtttat atccgctggt
      901 catgatgacg agcttgtaag agacatggtg ataagttttc tcatggctgg aagagacact
      961 acctcagccg cgatgacgtg gctcctttgg ttgctgacgt ggcaccctac cattgaaaaa
     1021 aatgttatta aagatgtcac gtatatgaca aatgatgaaa ataagtcgtc actaaacttt
     1081 gacgacttga aaaaaatgga ctatttgaaa gcatgcttat ttgaatcaat gaggctatat
     1141 ccgcccgttg tatgggattc gaagcatgcc aagcatgatg acgtgttacc ggacgggaca
     1201 cgtgtgtaca aaggaaatag ggtgatgtat ttcccatatg gtatgggaag gatggaaaca
     1261 ttgtggggaa aagattgttt ggagtttaga ccggaccggt ggtttagtga gttgggggat
     1321 tttaaaatgg aaagtcctta caagtttccg gtttttcaag gtggtccaag ggtttgtttg
     1381 gggaaagaaa tggcgattat gcaaatgaag tatgtgatgg cttcaattct aacaaggttt
     1441 gactttgtac cggtttgttc tgaccaaccg gtttttgttc ctatgttaac ggctcacatg
     1501 gatggtggtt taaaagttag ggtacgtaga agaattgacg tttgtgatca gctatga
//
LOCUS       XM_071830699             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840432), mRNA.
ACCESSION   XM_071830699
VERSION     XM_071830699.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139840432"
                     /note="uncharacterized LOC139840432; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840432"
     CDS             1..504
                     /gene="LOC139840432"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686800.1"
                     /db_xref="GeneID:139840432"
                     /translation="MVVKWWLIDGAGETRAFKKTWDLLSFARIPVKFELDKRGINLNS
                     VRCPICDGDIETVEHILFSCQMAKDIWAKVLKWWGYNSALFGYENIFNGTFDSVAHDH
                     KRNQWQAVCWVVCYIIWKNRNAKVFKNKLETVPSLFSEVQVLSYDWISRRCKGHIMDW
                     LQWFSQP"
     misc_feature    <82..210
                     /gene="LOC139840432"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggttgtaa agtggtggtt aattgatggt gctggtgaaa cacgtgcttt taagaaaaca
       61 tgggaccttt tatcttttgc acgtataccg gtaaagttcg agttagataa acggggcatc
      121 aatttgaaca gcgtgagatg tccgatttgt gatggtgaca ttgagacggt ggaacatata
      181 cttttttctt gtcaaatggc caaagacata tgggcgaaag tccttaaatg gtgggggtat
      241 aattcggctt tattcgggta tgagaatatt tttaatggta ccttcgacag cgtagcacat
      301 gatcacaaaa ggaaccaatg gcaagcggtt tgttgggtgg tttgttacat tatatggaag
      361 aatcgaaatg caaaggtgtt caagaataag ctcgagacgg tcccatcttt atttagcgag
      421 gttcaagttc tttcatacga ttggatttca cgacgttgca agggtcatat tatggattgg
      481 cttcaatggt tctcacaacc ttag
//
LOCUS       XM_071830700             630 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840433), mRNA.
ACCESSION   XM_071830700
VERSION     XM_071830700.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..630
                     /gene="LOC139840433"
                     /note="uncharacterized LOC139840433; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840433"
     CDS             1..630
                     /gene="LOC139840433"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686801.1"
                     /db_xref="GeneID:139840433"
                     /translation="MDFNSIQQEHKQPLITHNNYYHDQGGITTVKVVEYMLSSMSSEL
                     LTKFPDNSAFDFDYTQSSIWSPLVPHPSNPNSPASELQRSLSFDDDEEFVDDGSMSVK
                     KFTKNVKDKISGSCLLSCFKMKHKFSNKKVVVMKRRKSSFRGFDQLGPYWKNSMNVGV
                     DSGCSSPIQNKGWKKVLKAASKQFKKTMKKKDVGAHLRLSSNGYSQFSY"
ORIGIN      
        1 atggatttca acagtatcca acaagaacac aaacaacccc tcataaccca caacaattac
       61 taccacgatc aaggcggaat tacaacggtg aaggtggtgg aatacatgtt atcttcaatg
      121 tcaagtgagc ttctaacaaa gttcccagat aactccgctt tcgatttcga ttacacacaa
      181 agctcgattt ggtcgccttt agtccctcac ccttcaaacc ctaactcgcc cgcctcagag
      241 cttcagagga gtctttcgtt cgacgatgat gaagaatttg tcgatgacgg ttcgatgtcg
      301 gttaagaagt ttacgaagaa tgttaaggat aagatatcag gttcgtgttt gctgagttgt
      361 tttaaaatga agcataagtt tagtaacaag aaagtggtgg ttatgaaaag aaggaagagt
      421 agctttagag ggtttgatca gttgggaccg tattggaaga attcgatgaa tgtgggtgtg
      481 gattcgggct gttcttctcc gattcaaaac aaggggtgga agaaggtgtt gaaagcagca
      541 tcaaaacaat tcaagaagac aatgaagaag aaagatgttg gtgctcatct caggctctca
      601 tccaatggct actcacagtt ttcttattaa
//
LOCUS       XM_071830701             681 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840434), mRNA.
ACCESSION   XM_071830701
VERSION     XM_071830701.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..681
                     /gene="LOC139840434"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139840434"
     CDS             1..681
                     /gene="LOC139840434"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686802.1"
                     /db_xref="GeneID:139840434"
                     /translation="MAYILLYGDDIIITASSDDLHHNIIQQLSGEFDMKDLGRLHYFL
                     GIAVTHAPTGIFLSQAKYAREILERAGMTTCKPSKTPVDTKSKLGSHAGAPYDDPTSF
                     RSLDGALQYLTFTRPDISYAVQQVCLYMHAPHVGHMGALKRILHYIQGTLDFGLHLTK
                     SASNNLVSYIDADWAGRPDICRSTSSYCVYFGNNLISWSSKRKPTLSHSSAEAEYRGV
                     ANVVSVVN"
     misc_feature    <10..246
                     /gene="LOC139840434"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    505..>666
                     /gene="LOC139840434"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggcttata ttctattata tggtgatgat atcataatta ctgcatcttc ggatgactta
       61 caccacaata ttattcagca actctctggt gaatttgaca tgaaggatct tggacggttg
      121 cattatttcc ttggtattgc tgttacacat gctcctacgg gcatttttct aagtcaagct
      181 aaatatgctc gtgagattct tgagcgagct ggtatgacta cttgtaaacc ctcgaaaact
      241 ccagtcgaca caaagtctaa actcgggtct catgctggag ctccttatga tgatcctaca
      301 tcttttcgta gcttagatgg tgcacttcag tatctcacat tcactcgtcc agatatctct
      361 tatgctgttc aacaggtgtg tctgtatatg catgcccctc acgtcgggca catgggtgct
      421 ctgaaacgca ttttacacta tatccaggga actttagatt ttggattaca tcttactaaa
      481 tctgcgtcaa ataaccttgt ttcttatatt gatgcggact gggccggtcg tccagatatt
      541 tgtcgttcta catccagtta ttgtgtctat tttggtaata accttatttc atggtcgtct
      601 aaacgaaaac caacactatc ccactccagt gctgaggcag agtatcgtgg agttgctaat
      661 gtagtctctg ttgttaattg a
//
LOCUS       XM_071830702             465 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840435), mRNA.
ACCESSION   XM_071830702
VERSION     XM_071830702.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..465
                     /gene="LOC139840435"
                     /note="uncharacterized LOC139840435; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840435"
     CDS             1..465
                     /gene="LOC139840435"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686803.1"
                     /db_xref="GeneID:139840435"
                     /translation="MWRVLNRKIPVRTELDKRGIDLDSVRCPSCDDDIESIDHVMFFC
                     RSSLDVWERVYKWWNLGGVSNLSLSEAFRGNCIRPLSRSGKLIWQALEWTCAYLIWRN
                     RNLKVFSNKSWNSSSTLMDIQLKSYEWIASRYSKEKIEWLDWLTNPIKFCVE"
     misc_feature    <1..132
                     /gene="LOC139840435"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtggaggg tgttaaacag gaagatcccg gtccgtaccg aacttgacaa aagaggtatt
       61 gacttggact ccgttagatg cccttcatgt gacgatgata ttgaatccat tgaccatgta
      121 atgttctttt gtcgatcttc attggacgtt tgggaaagag tttataaatg gtggaatctc
      181 ggtggagtct ctaatctaag tttaagtgag gcctttcgag gtaattgtat tcgcccttta
      241 tcgaggtcgg gtaagctaat ttggcaagct ttggagtgga cttgtgcgta tctcatttgg
      301 cgtaatcgta acctcaaagt tttctcgaac aaaagttgga atagttcttc gactcttatg
      361 gacatccaat tgaaatcata tgagtggatt gcttcgcgtt attcaaaaga gaaaatcgag
      421 tggcttgatt ggttaactaa ccctattaag ttttgtgttg aatga
//
LOCUS       XM_071830704            1317 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840437), mRNA.
ACCESSION   XM_071830704
VERSION     XM_071830704.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1317
                     /gene="LOC139840437"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840437"
     CDS             1..1317
                     /gene="LOC139840437"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686805.1"
                     /db_xref="GeneID:139840437"
                     /translation="MEKKSIRFSSWWNSSSEATSCEDVSEVQQKESQVKLVANENQVV
                     NDDQIEDENPWQTGIHQFNEEQVVRRSSQTRKPNPRYTNAAIVVDEQSEPESFEEASQ
                     IVEWVGAMEEEINALQRNQTWDLVPKPSGVKPISYYDETFSPVAKLTTVRVLLALAAN
                     KGWSLWQMDVKNAFLHGELDRDIYMNQPTGFQRKQHPEYVYSSLFVKMVDGKLAVILV
                     YVDDLIITGDYEDEIVQIKENLSIRFQMKDLGYLKHFLGLELERSEDSVILHQIKYST
                     DLLKKFGMLDCKPIATPLEPNFKVCAHEGKDLKDATMYRQLVGSLIYLTLTRPDIAFA
                     VSVMSRYMQNLKKPHLEAVRRILRYVKGTLGQGVTFKKGEEYNLVGYCDADYAGDHDT
                     RRSTTGYVFMLGSGAVSWCSKRQPTVSLSTTEAEYRAAAMASQECT"
     misc_feature    358..885
                     /gene="LOC139840437"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    1135..>1311
                     /gene="LOC139840437"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggaaaaga aatccattcg tttctcatca tggtggaatt cgagcagtga agcaacatca
       61 tgtgaagatg tatctgaagt acaacaaaag gagtcacaag ttaagcttgt tgctaatgaa
      121 aatcaagttg ttaatgatga tcagatagaa gatgaaaatc catggcaaac tggtatacat
      181 cagtttaatg aagaacaagt tgtaaggaga tcatcacaaa cacgtaaacc aaacccaagg
      241 tacaccaatg cagcaattgt ggttgatgaa cagagtgaac cagagtcgtt tgaagaagca
      301 tcacagattg tcgaatgggt cggtgccatg gaagaagaaa ttaacgctct acaacgaaat
      361 caaacatggg acttagtgcc taagccgagt ggcgtgaaac ccatatcata ctacgatgaa
      421 acattcagcc cagtagctaa gctcaccact gtacgagtat tgttagcgtt agcagcaaat
      481 aagggttgga gtttgtggca aatggacgtc aagaatgcat ttttgcacgg tgaactagat
      541 cgagatatat atatgaatca accgacgggt tttcaaagaa agcaacatcc agagtacgtt
      601 tattcaagtt tatttgtcaa gatggtggat ggaaaacttg ctgtgattct cgtgtatgtc
      661 gatgacttaa tcatcacagg agattatgaa gatgaaatag tgcaaatcaa agagaatttg
      721 agcattagat ttcaaatgaa agatctcggt tatcttaaac actttcttgg cctggagctt
      781 gaaagatcag aagatagtgt tattcttcac caaataaagt actccactga tctactaaag
      841 aaatttggaa tgctagattg caaaccaatt gctacaccac tagaaccaaa tttcaaagtc
      901 tgtgcacatg agggaaaaga tttgaaagat gccaccatgt atcggcaact ggtgggaagt
      961 ttgatatatt tgactttaac tcggcccgac attgcatttg cagttagtgt gatgagtcgc
     1021 tatatgcaaa atctcaagaa gcctcactta gaagctgttc gtcgcattct aaggtatgta
     1081 aaaggtacac ttggtcaagg tgttacattc aagaaaggcg aagagtacaa tctggttggg
     1141 tattgtgacg cggattatgc tggagatcat gatacgcgaa ggtctactac tggatatgta
     1201 tttatgcttg ggtcaggggc agtttcatgg tgtagcaaac gacaaccaac agtgtcttta
     1261 tcaacaacag aggcggaata tagagcagct gcaatggcat cccaggagtg cacatga
//
LOCUS       XM_071830705            1062 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cysteine protease Amb a
            11.0101-like (LOC139840438), mRNA.
ACCESSION   XM_071830705
VERSION     XM_071830705.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1062
                     /gene="LOC139840438"
                     /note="cysteine protease Amb a 11.0101-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 44 Proteins"
                     /db_xref="GeneID:139840438"
     CDS             1..1062
                     /gene="LOC139840438"
                     /codon_start=1
                     /product="cysteine protease Amb a 11.0101-like"
                     /protein_id="XP_071686806.1"
                     /db_xref="GeneID:139840438"
                     /translation="MEFNNFIILLALSLALILGIAESFVYHEKELETEEGLQGMYDRW
                     RSYHKVEGKRNPERFNVFKYNVQNIHSKNKMNLPYKLQVNKFADLSTHEIATKYTNTK
                     LEHLFALQGKRKPTNFLYANETDIPKEIDWRNQNAVTPVKDQGDCGAGSWAFAAVGAV
                     EGINAIRTGKLVGLSEQQLIDCDIKGKDNGCVQGHHDAAMQFIKENGGIATEESYPFV
                     GKQETCDAAKFGRQSVTIDGEEKIPPNNEEAFMKAVAQQPVAIGMVAADDFAFYKEGV
                     YSGPCANCPANHVMLVVGFGETPDGKKYYIVKNSWGEWWGDKGYMLMERATNPEGLCG
                     MYRLAHIPLKSPDTQNIEL"
     misc_feature    121..282
                     /gene="LOC139840438"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     Region: Inhibitor_I29; pfam08246"
                     /db_xref="CDD:462410"
     misc_feature    376..1029
                     /gene="LOC139840438"
                     /note="Papain family cysteine protease; Region:
                     Peptidase_C1; pfam00112"
                     /db_xref="CDD:425470"
     misc_feature    order(430..432,451..453,862..864,925..927)
                     /gene="LOC139840438"
                     /note="active site"
                     /db_xref="CDD:239068"
     misc_feature    order(583..588,784..786,865..867,1012..1014)
                     /gene="LOC139840438"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
ORIGIN      
        1 atggaattca ataactttat tattttactt gcactttctt tagctttgat tttaggcatt
       61 gcggagagct tcgtatacca tgaaaaagaa cttgaaacgg aggaaggatt gcaggggatg
      121 tacgatagat ggcggagcta ccataaagta gagggaaaaa gaaaccccga gcggttcaat
      181 gtgttcaagt acaatgtcca aaatattcat agcaaaaaca agatgaattt gccatataag
      241 ttgcaggtta acaagtttgc tgacttgagt acgcatgaaa ttgccaccaa gtatactaac
      301 acaaagcttg aacatttatt cgcccttcaa ggaaaacgta aaccgacaaa ttttttatac
      361 gcaaacgaga ctgatatccc aaaagagatt gattggagga accaaaatgc tgtcacccct
      421 gtcaaggatc aaggagactg cggcgctggt agttgggctt ttgcggctgt aggcgcagtg
      481 gaaggaataa acgcgattag aacagggaaa cttgtagggt tatcagaaca acaactcata
      541 gactgtgata ttaaaggaaa ggataatgga tgcgttcaag gtcatcatga cgccgcaatg
      601 caattcatca aggaaaatgg aggtatagca accgaagaga gctacccttt cgttggaaaa
      661 caagaaacct gtgatgcagc caagtttgga cgtcagtcag taacgattga tggtgaggag
      721 aaaatccctc cgaataatga ggaagcattt atgaaagcag ttgcgcaaca accagtagct
      781 attggcatgg tggctgccga tgatttcgca ttttataaag agggagttta tagcggacca
      841 tgcgcaaact gtcccgccaa tcacgttatg ttagttgtcg gattcggtga gacacccgac
      901 ggaaagaagt actatattgt gaagaactca tggggagaat ggtggggaga taagggctat
      961 atgcttatgg aaagagcaac aaaccctgag ggactatgtg gcatgtatag acttgctcat
     1021 attcctttga agagccctga cacacaaaat attgaactct ag
//
LOCUS       XM_071830706            1653 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aldehyde oxidase GLOX-like
            (LOC139840439), mRNA.
ACCESSION   XM_071830706
VERSION     XM_071830706.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1653
                     /gene="LOC139840439"
                     /note="aldehyde oxidase GLOX-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840439"
     CDS             1..1653
                     /gene="LOC139840439"
                     /codon_start=1
                     /product="aldehyde oxidase GLOX-like"
                     /protein_id="XP_071686807.1"
                     /db_xref="GeneID:139840439"
                     /translation="MNTTLITRASCWSLEYFLLILLLFNRVVTSQWNWKLLLNNTGVV
                     AMHMAVTHHNNVVIFDQTRAGPSQYRLRRCYSHSSDDSSCYAHSVEYNVLTNKVRALH
                     LATDTWCSSGSFLSNGSLLQTGGNGSGSRKIRYYEPCTDSHCDWTEMRKQLSVRRWYA
                     SSLYLPDVDGVIVVGGQNGFSYEFVPTSGSSESYDLPFLHSTFERNSKGNNLYPFLHL
                     SSDGNLFIFANRDSILFDYKNSKVVKNFPTIPGYGGRSYPSSGSSVILPLNYNDNFSK
                     VEVMVCGGAARGAYSATQRDRYYPALRSCGRMVITGDRHKWRMENMPGPRLMSDMLVL
                     PTGDVLIINGAKRGCAGWNRASYPALEPYLYQPEQPSGQRFQVLTSTKIARLYHSSAV
                     ILPDGRILVAGGNPNSRYVSHGVAHPTELRLQALIPDYMSNQYDHLRPSNVSIIYPEQ
                     SNSGVKNGHEFSVSFILGTELNNLSVVAYASPFATHSLSMNQRLLRLECTSSGIGGEG
                     QVELTVVAPPSIYVAPPGYYMLTVGNGGIPSRSSWFKIIPSK"
     misc_feature    136..852
                     /gene="LOC139840439"
                     /note="Glyoxal oxidase N-terminus; Region: Glyoxal_oxid_N;
                     pfam07250"
                     /db_xref="CDD:399910"
     misc_feature    1303..1638
                     /gene="LOC139840439"
                     /note="C-terminal Early set domain associated with the
                     catalytic domain of galactose oxidase; Region: E_set_GO_C;
                     cd02851"
                     /db_xref="CDD:199882"
ORIGIN      
        1 atgaatacta cactaataac acgagcctcg tgctggtcgc tcgagtactt cctacttatt
       61 cttttactgt tcaatcgagt cgtaactagc caatggaact ggaaacttct cttgaacaac
      121 acgggtgtcg tagctatgca catggcggtc acgcaccaca acaacgttgt catattcgat
      181 cagacaaggg cgggcccatc tcaataccgt ctccgtaggt gctactctca cagttctgat
      241 gactcatcat gttacgcgca ttctgttgag tataatgtgt tgacgaacaa agttcgggct
      301 ctacatcttg caactgatac ttggtgctca tctgggtcgt ttttaagcaa cggaagcctc
      361 cttcaaacgg gcggtaacgg gtcgggttca agaaagatca gatattatga accttgtact
      421 gatagccact gtgattggac ggaaatgagg aagcagttat cagttagaag atggtacgcg
      481 tcgagtttat atttaccaga cgtggacggt gttatagttg tcggcggaca aaacggtttt
      541 agttacgaat tcgtgccaac atccggatcg agtgaatctt acgatcttcc atttttgcat
      601 agtacgtttg aacgaaactc gaaagggaac aatctatacc ctttcttaca cttatcgtct
      661 gatggaaatt tattcatttt tgctaaccgg gattcgattc ttttcgatta taaaaactcg
      721 aaagttgtta aaaattttcc gacaattccg ggatacgggg gtcgtagtta ccctagcagc
      781 gggtcttccg ttattcttcc gttaaactat aacgataact tctcgaaagt tgaggttatg
      841 gtttgtggcg gtgcagcccg tggggcctac agtgcgactc agcgggatag atactatccc
      901 gctttaagat catgcgggag aatggtgata accggggacc gccacaagtg gcggatggaa
      961 aatatgccgg gcccacgcct aatgagcgac atgttggttt taccaaccgg tgacgtctta
     1021 atcatcaacg gtgcaaaacg aggttgtgct ggatggaatc gggcatcgta tccggctctt
     1081 gaaccgtacc tttaccagcc cgaacaacct tcggggcaac ggtttcaggt tctaacatca
     1141 actaaaatcg cccgtttgta tcattcatcc gcggttattt taccggatgg taggattttg
     1201 gttgctggtg gaaacccgaa tagtcgatac gtctcacacg gggtggccca cccaaccgaa
     1261 ttgagactac aagcgctaat cccggactac atgagcaacc aatacgacca tcttcggcca
     1321 agtaacgtgt ccattattta cccagaacag tcaaattctg gcgtcaaaaa tggacacgag
     1381 tttagtgtta gtttcatatt ggggaccgag ttgaataatt taagtgtggt ggcttatgca
     1441 tcaccatttg cgactcactc gctatcaatg aatcaaagat tgctgagact tgagtgtacg
     1501 agctcgggta taggtggcga gggtcaggtt gagctaacgg tggtagctcc tccatccatc
     1561 tacgttgcac caccaggtta ttatatgtta acggtgggga acggtgggat cccgagtaga
     1621 tcgtcatggt ttaagatcat cccgagtaaa taa
//
LOCUS       XM_071830707            1788 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein LYK5-like
            (LOC139840440), mRNA.
ACCESSION   XM_071830707
VERSION     XM_071830707.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1788
                     /gene="LOC139840440"
                     /note="protein LYK5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 29
                     Proteins"
                     /db_xref="GeneID:139840440"
     CDS             1..1788
                     /gene="LOC139840440"
                     /codon_start=1
                     /product="protein LYK5-like"
                     /protein_id="XP_071686808.1"
                     /db_xref="GeneID:139840440"
                     /translation="MANTFTLLLALILLITIIQPMLSVQPYDQTLCTTPTPPLYGSTY
                     TCNSINKTCKTYVVYRPHVNQTVSYIAKLYNVNESQLNSTSHLEYREVLVPIVCSCPD
                     SSSRVVVNYTNDNSYSDLDIACQVYQGMVKPYVLAMQNANLHETVVVSVPIKCACVNL
                     SDETIGTKYLVTYPVMESDTVDVIAQKFGVTPGSILEVNGLGPKETIFGGTTLLVPTR
                     GPPVLNLDHVVVTGPSSQDIIPVSGIMKPGMENRFSFFLIIFASISLLGVVLFLIFLK
                     WKCRYDEPPPLSVTGSDLKRVSPDFLDDMSKLKHSITNFSFDELKLATHEFSVSSSIG
                     KSVYRGLISNDIFVAIEDMDSIESGHHVVNILTTINHFNVVKLEGCCFETNQAYLVFE
                     FAENGSLRDCLQDSNTRKQLTWEKRLKIAFDLAEGLHYIHHCTKPTYVHRNISSENVL
                     ITEDWRAKITGFKFATPVVYIAGVDFDSGDWTDSLIIEKKDCLAPGYPVDVYAYGVVL
                     LELLSAKEAGIGRKWLDCVEFLADGEVLGGSTECLEKFKTFMDVDLEGEYGLGDAMCL
                     ALLAKCCIQDDPQVRPTMNDVLKTLSRIL"
     misc_feature    511..645
                     /gene="LOC139840440"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; Region: LysM; cd00118"
                     /db_xref="CDD:212030"
     misc_feature    997..1782
                     /gene="LOC139840440"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(997..1008,1009..1011,1045..1047,1123..1125,
                     1171..1182,1327..1329,1339..1344,1348..1350,1378..1383)
                     /gene="LOC139840440"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggcaaaca cattcacttt gcttttagcc cttattctcc taattacaat tatacaaccc
       61 atgttatccg tacaaccata tgaccaaacc ctttgcacca cacccacacc acccctttat
      121 ggttcaactt acacttgcaa ctccatcaac aaaacatgca aaacttatgt tgtttataga
      181 cctcatgtta accaaacagt ttcctacatt gccaaacttt acaatgtcaa tgaatcccaa
      241 ctcaattcca caagtcattt ggaatatcgt gaagtcctcg tcccaatcgt ttgttcttgc
      301 cccgactcgt catctagagt tgtcgttaac tacacaaacg ataactccta ttcagattta
      361 gatattgctt gtcaagtata ccaagggatg gtgaagcctt atgtattggc aatgcaaaat
      421 gcaaaccttc atgagaccgt agtcgttagc gtacctatta aatgtgcgtg tgtcaacttg
      481 tcagacgaga caattggtac aaagtatctc gtgacgtatc cggtgatgga gagtgatacc
      541 gttgatgtga tcgctcagaa atttggggtg acaccagggt ccatcctgga agtgaatggg
      601 ttgggcccga aagaaaccat ttttgggggg accacgttgt tggtaccaac aaggggtccc
      661 ccagtcttga acttggacca cgtggtggtt actggtccaa gttcacagga catcattcca
      721 gttagtggaa tcatgaaacc tggaatggag aaccggtttt cattttttct aattattttt
      781 gcatcaattt ctcttctcgg cgtagttttg tttcttatat tcttaaaatg gaaatgtcgt
      841 tacgatgaac caccacccct gtcagtaaca ggatcagact tgaaacgtgt atcgcccgat
      901 tttcttgatg acatgtcaaa gttgaagcac tccataacga attttagttt cgatgagctc
      961 aaactcgcaa cacacgagtt ctctgtctct tcatccattg gtaaatcggt gtacagaggc
     1021 ctaatttcta acgacatctt tgttgcgata gaagatatgg attcaatcga gtctggtcat
     1081 catgttgtga acatattgac aaccatcaat cattttaatg tagttaagct agaaggatgc
     1141 tgtttcgaaa cgaaccaagc ttatctggtg tttgaatttg ccgaaaatgg aagtttaaga
     1201 gactgtttgc aggactcaaa tacaagaaaa cagttaacat gggagaaacg attaaagatc
     1261 gcatttgatc tagcggaagg gttgcattac atacatcatt gcacaaaacc aacatatgtc
     1321 catcgaaaca taagtagcga aaatgtgtta ataacagaag attggagggc aaaaattaca
     1381 ggatttaagt ttgcaacacc agtagtttac atagcagggg tggattttga cagtggagat
     1441 tggacagatt cgttgattat cgagaaaaag gactgtttag ctcctgggta tcctgttgat
     1501 gtttatgctt atggggtcgt tttattggaa cttttatcgg cgaaagaggc aggtattggt
     1561 cggaaatggt tggactgtgt cgagtttctg gctgatgggg aagtgttggg tggttcgacc
     1621 gaatgtttag agaagtttaa gacgtttatg gatgttgatt tggaagggga atatggttta
     1681 ggggatgcaa tgtgtttagc ccttttggct aaatgttgca tacaagatga ccctcaagtt
     1741 aggcctacta tgaatgatgt tcttaagact ctttcaagaa tattatga
//
LOCUS       XM_071830708            3338 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840442), mRNA.
ACCESSION   XM_071830708
VERSION     XM_071830708.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3338
                     /gene="LOC139840442"
                     /note="uncharacterized LOC139840442; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840442"
     CDS             1..3114
                     /gene="LOC139840442"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686809.1"
                     /db_xref="GeneID:139840442"
                     /translation="MSLFAVLLVLSSCFFNLSFVIPSHATARKISIPPDNTNEASALL
                     KWKISLDTESQSFLSSWVGSNPCGHDWVGIGCTNRTATTKSVVKRISIGNSGLVGTLD
                     NLDLLSLPNLEVLNLPHNSLFGYIPSNLFNMSKLHALDLSFNNFSGKISPDIGLLGSL
                     SSLILRGNSLHGHIPNSIAKLNKLNRLDLGINLLTGVIPQEIGTLSSVELRNLDFSSN
                     KLTGYIPSSLGNLTGLLFLYLYDNKLSGLVPPEIVGPRDLIHLELGYNNLTGVIPSFL
                     GNLTSLRSLFLSGSHLSGSIPTSFKNFTSIVVFNIDDNFISGSIPNFLANYTKLEELN
                     LQMNEFTGFIPAELGKRTALHTFKIFYNSLSDSIPQGMNLTKMEDFEVVGNNFSGPLP
                     NDICVSGLLRRLTLSDNSFSGSVPKSLKNCSSLYRVRMENNQLTGNISKDFGTYPDLD
                     YMDLSNNRFYGEVSSNWGSCSNLTFLDMSNNNLSGNIASELGEATSLVKLQLSSNHLM
                     GEIPNSLGRLTSLTTLYLDNNNLSGTIPSELGNLYNLEELNFAKNSFSSPIIENLGDC
                     LKLRIFNLSKNQISGVIPIVISKLGTLESLDLSENRLIGGLPSQLGGLTTLQILNLSH
                     NNLTGSIPSSFTAMVSLTTVDISYNQLEGPLPNMRVFEDAPMESLKGNKRLCGNNTGL
                     DCTIQQRNQTHRKKVLTKILIVVLFLVFIVIVLFYVVIVLFYLRREKKEDIDTSQTVE
                     ENPFIIWYYDGTAVYESIIEALENFDSKYIVGVGGYGAVYKAELSTHVLAVKKLHAPE
                     DGDLQDLKSFENEIRVLTEIRHQNIVKLHGFCSHSRHSFLVYEFLAGGSVRMVLNDTE
                     RAVVFDWKKRVTAVQGVAKALSYMHHECDQPIIHRDISSSNVLFDLEWVAHVSDFGTA
                     RVLKPDSSNWTSLAGTFGYIAPELAYTMEVTEKCDVFSFGVLTFEILMGKHPGDSLIT
                     SLRDIQEISLTEILNQRLPLPVQQTAEQVKLLVEVALSCVQKSPASRPSMREVYLGLS
                     AEKKRSQ"
     misc_feature    106..3108
                     /gene="LOC139840442"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    334..405
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    550..627
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    628..699
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    700..771
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    772..843
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    844..915
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    916..987
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    988..1059
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1060..1179
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1201..1272
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1273..1344
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1345..1416
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1417..1488
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1489..1560
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1561..1632
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1633..1704
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1705..1776
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1777..1848
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1849..1914
                     /gene="LOC139840442"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 atgtcgttat tcgccgtctt gctagtttta tcttcttgtt tctttaatct ttcatttgtc
       61 atcccttcac atgcaactgc tcgaaaaatt tcaataccac cagataacac aaatgaagca
      121 tcggcgcttt tgaaatggaa aataagcctt gatacagaga gccaatcgtt tctttcttca
      181 tgggttggaa gcaacccatg tggccatgat tgggtgggaa ttggctgtac gaatcgtact
      241 gcaactacaa aaagtgttgt aaaaagaatt tctattggaa actcggggtt agtaggaaca
      301 ctagacaatc ttgatctctt gtctttaccc aatcttgaag tcttgaatct tccacacaac
      361 tcactttttg ggtacattcc ttccaacctt ttcaacatgt ctaaactgca tgctcttgac
      421 ctgtcattta ataacttctc aggtaaaata tcgccagata tagggttgtt gggatcttta
      481 agtagtctta ttttgcgtgg taacagtctt catggtcata tcccaaatag cattgctaag
      541 ctgaataaat taaatcgtct tgaccttgga attaatcttc ttaccggagt catcccacaa
      601 gaaattggga cactcagttc cgttgaattg agaaacctcg acttttctag taataaactt
      661 accggataca tcccttcttc tttaggaaat ttaaccggtc tcttattcct ttatctgtat
      721 gataataaac tctctgggct cgtcccacct gagattgtcg ggccccggga tctgatacac
      781 ctagagcttg ggtataataa tcttactgga gtcattcctt cttttttagg aaatttaact
      841 agtcttcgat cgctatttct gtctggtagt catctttctg ggtccattcc cacctccttc
      901 aaaaatttca cttcaatagt ggtttttaat atagacgata actttatatc tggatcgatt
      961 ccaaattttt tagcaaatta caccaagctt gaagaattaa acctgcaaat gaatgaattc
     1021 acagggttca taccagctga attgggaaag agaacggctc ttcacacatt caaaattttc
     1081 tataatagtc tcagcgactc aattcctcaa ggtatgaatc taacaaagat ggaagatttt
     1141 gaagttgttg gaaacaattt ctcaggtcct ttaccaaatg atatatgtgt atctggactt
     1201 cttcgacgtt tgactttgtc cgataactcc ttctcgggat ctgtaccaaa gagcttgaaa
     1261 aactgtagca gcttgtacag agttcggatg gaaaacaacc aactgacggg taacatctcc
     1321 aaagattttg gtacatatcc tgatctggat tatatggatt taagtaacaa caggttctac
     1381 ggtgaggtgt ctagtaactg ggggtcttgt tctaatttaa catttttaga catgtcaaac
     1441 aacaacttgt ctggaaacat agcaagtgag ttaggagaag caacaagttt agttaaactt
     1501 caattgtcat caaatcactt gatgggtgaa atccctaata gcttgggaag attaacctca
     1561 ttgacgacat tgtatttgga caacaataac ctatcaggta caattccttc agaattagga
     1621 aatttgtata acttggaaga gcttaacttc gcaaaaaatt cttttagtag cccaatcatc
     1681 gaaaacttag gagattgctt aaagctaagg atttttaatt taagtaaaaa tcaaatctcc
     1741 ggagttattc caatagtaat ttccaaattg ggcacattag aatctcttga tcttagtgaa
     1801 aatcgtttga ttgggggttt accgtcacag cttgggggtc tcacaacact acaaatttta
     1861 aacctctctc acaataacct cactggatct attccttcca gttttacggc aatggtaagt
     1921 ttaaccacgg ttgatatatc ttataatcag ctagagggac cacttccaaa tatgcgagta
     1981 tttgaagacg ctccaatgga gtcattgaaa ggcaacaaac ggttatgtgg aaataacacg
     2041 ggtttagatt gtaccatcca acaacgtaac caaactcaca gaaagaaggt tctgacaaag
     2101 attctaatag tagttctttt cttggttttt attgttatag tattatttta tgttgttatt
     2161 gtattatttt atctccgtcg agaaaagaaa gaagatatcg atacatccca aactgttgaa
     2221 gaaaacccat ttataatctg gtattatgat gggacagcgg tgtatgagag catcattgaa
     2281 gctctggaga actttgactc caagtatatt gttggggttg gtggatacgg tgccgtttat
     2341 aaagcagaat tgtccacaca cgtgttagct gtgaaaaaac tccacgcacc agaagatggt
     2401 gatttgcaag atttgaaaag tttcgaaaat gagatccgag tgttgacaga aatacgtcat
     2461 caaaacattg tgaaactcca tgggttttgt tcacattcga ggcactcgtt tttggtgtat
     2521 gagtttttgg caggtggaag cgtaaggatg gtactgaatg atacggaacg agcagttgtg
     2581 tttgattgga aaaaaagggt gacggctgtt caaggcgttg caaaggctct atcttatatg
     2641 catcatgaat gcgaccaacc tataatccat agggacatat caagcagtaa tgttttattc
     2701 gatttagagt gggttgctca tgtttctgat tttggcacag ccagggtatt aaaaccagac
     2761 tcatccaact ggacttcact tgcaggaacg tttggctaca ttgcgccaga attggcatac
     2821 acgatggagg tgacagagaa gtgtgatgtt ttcagctttg gtgttttaac atttgaaatt
     2881 ttaatgggaa agcatccagg tgattcattg atcacctcgt tacgagacat acaagagata
     2941 tctctgactg aaattttaaa ccaacgcctg cctttaccgg tgcaacaaac tgctgaacaa
     3001 gtgaaattgc ttgttgaagt tgccttgtca tgtgtgcaaa agagccctgc ctctcgacct
     3061 tcaatgaggg aagtttatct tggtttatca gcagagaaaa agcggtccca atagatcata
     3121 tcttcctcct gaatctatag ggggaagttt atgggagaac ctaaacacaa catacttacg
     3181 atatacagaa tgtctatttt catttcaagc ttaagtcaac gtgtgttttg ttgtatgatt
     3241 gtatgtattg tatgtatttt attctatcta tgtatttaat tttcagaact ttggcagcta
     3301 ttgtttcaga aatttttaat atataataag aatgctta
//
LOCUS       XM_071830710             828 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840444), mRNA.
ACCESSION   XM_071830710
VERSION     XM_071830710.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..828
                     /gene="LOC139840444"
                     /note="uncharacterized LOC139840444; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840444"
     CDS             1..828
                     /gene="LOC139840444"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686811.1"
                     /db_xref="GeneID:139840444"
                     /translation="MGNGSKTKMWKDTWLGNEPLCSRFNRIFHLDVDPDCFVADRRSN
                     NSWLWHWNREQLGGRNDSVLVELHQLVDAVSVSKTEDKKYWILSPHSGYSVSNTRRLI
                     DDVLLPSLQSSTRWSKSIPKKVNIFLWRLSINRLPTRWSLVKRGVEIGDIGCPHCTCG
                     LEDESHIMFTCLLAKEVSGKISIWTGVDTSMFDSWTSWVTWYDQWQTSGSIKNRMNVI
                     VAALLWILWRFRNDVIFMDDRAKKADIFDSIRDVSYVWLSSRCKDMLNWNNWLIKPL"
     misc_feature    <346..531
                     /gene="LOC139840444"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggtaatg ggtccaagac taaaatgtgg aaagatactt ggttgggtaa tgaaccttta
       61 tgctctcgtt ttaacagaat ttttcattta gatgttgatc cagactgttt tgttgcggat
      121 agaagaagta ataattcatg gttatggcat tggaatagag agcaactagg tggtaggaat
      181 gattctgttt tggtcgaatt acatcagctt gtagatgcag tttcagtttc aaaaacggaa
      241 gacaaaaaat attggatttt aagtcctcat tcgggatatt cggtgtctaa tacaaggagg
      301 ttaatagatg atgttctctt accatcgtta caatcaagta cgaggtggag taagtcgatt
      361 cctaagaagg taaatatttt cttatggcgt ttatctatta atagattgcc tacgagatgg
      421 agccttgtta aacgtggtgt agagattggg gatatcggtt gtcctcattg tacttgcggt
      481 ttggaagatg aatctcatat tatgtttaca tgtttacttg caaaagaagt ttcgggaaag
      541 atatctattt ggacaggagt cgatactagc atgtttgact cttggacatc atgggtgact
      601 tggtatgatc aatggcaaac tagcgggtct ataaaaaatc gaatgaatgt tattgtggcg
      661 gctttacttt ggattctatg gcgatttcgc aatgatgtca tttttatgga tgatagggcg
      721 aagaaggcgg atatttttga ttctattcgt gatgtatctt atgtttggtt atcgagtcga
      781 tgtaaagata tgttgaattg gaacaattgg cttataaagc cgttgtaa
//
LOCUS       XM_071830711             414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840445), mRNA.
ACCESSION   XM_071830711
VERSION     XM_071830711.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..414
                     /gene="LOC139840445"
                     /note="uncharacterized LOC139840445; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840445"
     CDS             1..414
                     /gene="LOC139840445"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686812.1"
                     /db_xref="GeneID:139840445"
                     /translation="MKEKFEQTEEQQELEIIKAVAQAWLGHTTTTSPPSSTNEFDTRR
                     LNFKNHPTRFNLEAMTKPSRNNNHNDKVATHWDFNQSLWDAYELVAVSRRLEASLLSE
                     NEINESSTGQGSSKKKKKESKNSLRNILLMNKDGF"
ORIGIN      
        1 atgaaagaaa agtttgaaca aactgaagaa caacaagaac tcgaaatcat caaagcggta
       61 gctcaagcat ggctgggtca caccaccacc acatcaccac catcttccac caacgaattc
      121 gacactcgtc gactcaactt caagaaccac cccacaagat tcaatcttga agcaatgaca
      181 aaaccatcaa gaaacaataa ccacaatgac aaggttgcga ctcattggga ttttaaccaa
      241 tcactttggg acgcgtatga gctcgtagct gtgtcaagga ggctcgaggc atcgttatta
      301 tcggaaaatg aaattaacga gtcgagtacg ggtcaaggta gtagtaagaa aaagaagaaa
      361 gaaagcaaga atagcctcag aaacatactt ttgatgaata aagatggttt ttga
//
LOCUS       XM_071830712            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840446), mRNA.
ACCESSION   XM_071830712
VERSION     XM_071830712.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139840446"
                     /note="uncharacterized LOC139840446; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 46
                     Proteins"
                     /db_xref="GeneID:139840446"
     CDS             1..1116
                     /gene="LOC139840446"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686813.1"
                     /db_xref="GeneID:139840446"
                     /translation="MEGEGAKKRKLEDESSDDEIEELIFNKPFSSNDPIKKLEITPRV
                     LDFWRALSVFRCAAIYIRIFTGKTISLEVKLSDTISYIKALIEYKEHICTNEQVLMLN
                     TGIVLEDSDILADFDIANTHPVITLIRKSSGLIPIFIKQIFQWSLPNHTRTISLYVKP
                     SDTISNVKHKIYSKCSSFPIDEQRLIYNDMLLDDNGTLADFHIKKDFTLTLVRSGGWI
                     KIFVKTLSSGKTISERVKPSYTVGKVKEKIESSVSIPPNEQILMFKDMVLEDSCTLAD
                     FDIGRDSTLTLIQKSDGKMQIFIKMLIGKTINLKVKPLDTVDFVKNVMERIEDIPCHQ
                     QRLIFEGRQLEDWRTLKHYNITNESTLHLVLKLEGGG"
     misc_feature    175..393
                     /gene="LOC139840446"
                     /note="Ubiquitin family; Region: ubiquitin; pfam00240"
                     /db_xref="CDD:459726"
     misc_feature    421..636
                     /gene="LOC139840446"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
     misc_feature    652..>879
                     /gene="LOC139840446"
                     /note="Ubiquitin [Posttranslational modification, protein
                     turnover, chaperones]; Region: UBI4; COG5272"
                     /db_xref="CDD:444084"
     misc_feature    883..1110
                     /gene="LOC139840446"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
ORIGIN      
        1 atggagggtg aaggagcgaa gaaacgaaaa ctggaggatg agtcatcaga tgatgaaatc
       61 gaagagctta tcttcaacaa acctttttca tcaaatgacc ctattaaaaa actagaaatt
      121 actccccgag tactcgattt ttggagagct ctgagtgttt ttcgatgtgc agctatatat
      181 atcaggattt tcacaggtaa gaccatatct ttagaagtca aactctcaga caccatcagc
      241 tacataaaag ccttgattga gtataaagaa catatttgca ccaacgagca ggtgctgatg
      301 ttgaacaccg gcattgtcct cgaggatagc gatatccttg ctgactttga catcgcgaat
      361 acacacccgg tcatcacact tatccgtaaa tcatcaggac tcatcccgat atttatcaag
      421 cagatattcc agtggtcttt accaaatcat actcgtacca tttcgttgta tgtcaaacct
      481 tcagacacca tcagcaatgt aaaacacaaa atctattcta agtgcagtag ttttcccatt
      541 gacgagcaga ggctgattta caacgacatg ctccttgacg ataatggcac acttgctgat
      601 ttccacatca aaaaggactt tactctcaca cttgttcgat cagggggatg gataaaaata
      661 tttgtcaaga ctctaagctc gggcaagacc atctctgaga gagtcaaacc ctcatacaca
      721 gtcggcaaag tcaaagaaaa aatcgagtcc agtgtaagta tcccccctaa tgagcagatc
      781 ctgatgttta aagacatggt tcttgaggac agctgtacac ttgctgactt tgacattggt
      841 agggattcta cgctcacact tattcagaaa tcggacggaa agatgcagat attcattaag
      901 atgttaattg gaaagaccat taatctgaaa gttaaaccct tagatacagt tgactttgtt
      961 aaaaatgtga tggaacgtat agaagatatt ccttgtcacc agcagaggct gatctttgaa
     1021 ggaaggcaac tcgaggactg gcgtaccctc aaacactaca acatcaccaa cgaatccacc
     1081 cttcatcttg tgcttaaact agaaggagga ggatga
//
LOCUS       XM_071830713            1813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840447), mRNA.
ACCESSION   XM_071830713
VERSION     XM_071830713.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1813
                     /gene="LOC139840447"
                     /note="uncharacterized LOC139840447; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840447"
     CDS             758..1813
                     /gene="LOC139840447"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686814.1"
                     /db_xref="GeneID:139840447"
                     /translation="MVGEGSEKRKREDDSSDTEINEFSFNNHSPSSSNDRIITIFVKI
                     YTGKTISLEVKLSDTINHIKTLIERKERICPNQQVLILDDTVFEDTDIVADFYIENKQ
                     PVLTLISKSLGLIRIFVKKIACEPYLEHTFSLNVKPSDTIINVKHKIYSKCICERYPV
                     DEQRLIYNDMLLDDNGTLADFHIKKDSTLKLLKSSGGWIKIFVKTLSSGKTISERVKP
                     SYTVSKVKELIESSVGIHPNEQVLMFNDMVLDDCCTLADFDIGRDCTLTLIQKSDAKM
                     QIFIKMMDGNTIIMKVKPLVTIDRVKTAIERLKDIPYDQQRLIFEGRPLEDWRTLKHY
                     NINNGSTLHLILRLIGG"
     misc_feature    869..>1108
                     /gene="LOC139840447"
                     /note="Ubiquitin [Posttranslational modification, protein
                     turnover, chaperones]; Region: UBI4; COG5272"
                     /db_xref="CDD:444084"
     misc_feature    1100..1348
                     /gene="LOC139840447"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
     misc_feature    1352..1570
                     /gene="LOC139840447"
                     /note="Ubiquitin homologues; Region: UBQ; smart00213"
                     /db_xref="CDD:214563"
     misc_feature    1583..1810
                     /gene="LOC139840447"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; Region:
                     Ubl1_cv_Nsp3_N-like; cl28922"
                     /db_xref="CDD:475130"
ORIGIN      
        1 atcataattt taatcagatc aaaagtcact taccattatg agttccattt atgaaatcag
       61 atgcaaaata aaaagttgtt ctaactcgtt gccaccaccg actacatcta gttctggcga
      121 cctccaattc gtctccggcg accaccagtt actcactgcc acttgcgccg gaggtcaaga
      181 acactgtcac tcaaggcgac ctttgttttt ccggccacaa atttgaacat gttcaaaaac
      241 gggagacatg ttatttgggc caacaagcga acatttctca atcattccat acgtgaagca
      301 attgctagcc tgctttcagc tttctgaatc acacgatgtt aatagaagaa atgaattctt
      361 tgttatttta tggacatcat gtgcatatca agttctctgt gtttgctgca acgatgatta
      421 tgagaagata gagtaggcaa agtgtccaac ttgcagggtt tggtgttttg atttagcagt
      481 gtgtttgtta tgagcttcgc gtataccaat tgtcgtgctt tacatgtacc tcctaaaatt
      541 tattatccca gttaatgtgt atcatttgtg attttcttta gttttcaatt ttttcttgta
      601 aattaaaaat taaaatcatg tggtttggaa ttggttaagt gttgataatt tttaggcgtt
      661 aatgagttta tgatttttta taaggattga agatgtagat gaagatgatg aaggctgata
      721 aaatgacgaa acacacgagc ttccgtctca aataaaaatg gtgggtgaag gatcggagaa
      781 acgaaaacgg gaggatgact catcagatac tgaaatcaac gagtttagct tcaacaacca
      841 ttcaccttct tcttcaaatg atcgcattat aactatattc gtcaagattt acacaggtaa
      901 gaccatttct ttagaagtca aactctcaga cacaatcaat cacataaaaa ccttgatcga
      961 gcgtaaagaa cgtatttgcc ccaaccagca ggtgctgatc ttggacgaca ccgtcttcga
     1021 ggataccgat atcgttgccg acttttacat agagaataaa cagcccgtcc tcacacttat
     1081 cagtaaatca ttgggactga tccggatatt tgtcaagaag atagcatgcg agccttatct
     1141 agaacatacc ttttcgctga acgtcaaacc ttcggacacc atcatcaatg ttaaacacaa
     1201 aatatattct aagtgcattt gcgaacgtta tcccgttgac gagcagaggc tgatctacaa
     1261 cgacatgcta cttgatgata acggtacact tgctgatttt cacattaaaa aggactccac
     1321 tctcaaactt cttaaatcat caggggggtg gattaaaata ttcgtcaaga ctctaagctc
     1381 ggggaagacc atttctgaga gagtcaaacc ctcatacaca gtcagcaaag tcaaagaatt
     1441 aatcgagtcc agtgtaggta tccaccctaa tgagcaggtg ctgatgttca atgatatggt
     1501 tcttgatgac tgctgtacac ttgctgactt tgacattggt agggattgta cgctcacact
     1561 tattcagaaa tcagacgcaa agatgcagat attcattaag atgatggatg gaaataccat
     1621 tattatgaaa gtcaaaccct tagttacgat cgaccgtgtt aaaaccgcga tcgaacgttt
     1681 aaaagatatt ccttatgacc agcagaggct gatctttgaa ggaaggccac tcgaggactg
     1741 gcgtaccctc aaacactaca acatcaacaa cggatccacc cttcatctta tacttcgact
     1801 aataggagga tga
//
LOCUS       XM_071830714             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840448), mRNA.
ACCESSION   XM_071830714
VERSION     XM_071830714.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139840448"
                     /note="uncharacterized LOC139840448; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840448"
     CDS             1..804
                     /gene="LOC139840448"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686815.1"
                     /db_xref="GeneID:139840448"
                     /translation="MLESHKEATVAERISNINSTSIGNWDWSRTPSGRAMDELTELNN
                     LISSVSISNCPDSWKFSLDTSGTFTTSTMSNLINTLKYGVHSRNLSLPRNKYVPQKVF
                     IFSWRVIQLKIPVRSELDKKGIDLHTILCPLCDHHIETIEHALVDCHKVSSIWTQLLD
                     WWNQNNITISNINEAIISDQGFSHNSFGYSLWQATKWIACYIIRKQMNLKVFSCKVWN
                     PAMVISEIQAQSFSWISNRSQKKAPIKWHQWLLNPSFYAASPPNRMGIG"
     misc_feature    <280..462
                     /gene="LOC139840448"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgttagaat cccacaaaga agcaacagtt gccgaaagaa tttcgaacat taactccaca
       61 tcgatcggga attgggattg gtcccggaca cctagtggtc gtgcaatgga tgaacttacg
      121 gaactcaata atcttatttc atccgtaagt atttcgaatt gccccgattc atggaaattc
      181 tcccttgaca catccggcac tttcactaca tcaaccatgt caaacttgat taacacacta
      241 aaatacggcg tccactctcg aaacctatca ttacctcgca acaaatacgt cccacaaaag
      301 gttttcatat tctcatggag agtcattcaa ctaaaaatcc cggttagaag tgaacttgat
      361 aaaaaaggaa ttgacttaca taccatttta tgtcctctat gcgatcacca tattgaaaca
      421 attgaacatg cgttggttga ttgtcacaaa gtgtcttcaa tttggacaca actgctcgac
      481 tggtggaacc aaaataacat aacaatctcc aacataaatg aagccatcat ttccgaccaa
      541 ggtttctcac ataactcctt tggttattcc ttatggcaag ctactaaatg gattgcatgc
      601 tacattataa ggaaacaaat gaacctaaaa gttttttcat gtaaagtgtg gaatcctgca
      661 atggttatct ccgagattca agcacaaagt tttagctgga tctcaaaccg ttcgcaaaaa
      721 aaagcaccaa tcaaatggca tcaatggctt ctcaaccctt ccttttatgc ggcatcaccc
      781 ccaaaccgaa tgggtatcgg ctaa
//
LOCUS       XM_071830715            1011 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840450), mRNA.
ACCESSION   XM_071830715
VERSION     XM_071830715.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1011
                     /gene="LOC139840450"
                     /note="uncharacterized LOC139840450; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840450"
     CDS             1..1011
                     /gene="LOC139840450"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686816.1"
                     /db_xref="GeneID:139840450"
                     /translation="MSWVKWDDCLLPYDSGGLNIGSLRGKNLTLLGKWFWRAKTEPNS
                     FWVTIIKSIYGANGLLPPTGLNGPKGQKFTRLFHLEEEPNIRVRDRVTWIDRDAIFTE
                     NWRRTPSGRTLDDLNSLKALLNAYVKQDKTMDSWVCNLAGNGLFTTKKLATIIDDKLI
                     CTGSSSNEEFMKNHLLPIKVSIFIWRVLRRRIPVRTELDKRGIDLDSVRCPLCDDDVE
                     TIDHTLFFCRHAMEIWDRVYKWWGLGTVSNLRINEAFRGKCNRSLSSLWSSIWQSIEW
                     TCAYLIWNNRNQKVFSNSSWNGPTGLMEIQLKSFEWISCRIRNRKMDWLGWISDPWSC
                     FV"
     misc_feature    <526..699
                     /gene="LOC139840450"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtcatggg tcaaatggga tgattgtctt ttgccttatg attcgggagg gttaaatatt
       61 gggtctcttc gggggaagaa tcttactcta ttggggaagt ggttttggcg ggcaaaaacc
      121 gagccaaact cattttgggt tactattatc aaaagtattt atggtgctaa tgggctactt
      181 cctcctacgg gcctcaacgg gccgaaaggg caaaagttca cgcgtttatt ccatttggaa
      241 gaggagccga atatacgtgt tcgtgataga gttacttgga ttgatcgtga tgctattttt
      301 actgagaatt ggaggagaac accatcgggt cgaacacttg acgaccttaa ttctcttaag
      361 gcactattga atgcttatgt gaaacaagat aagacaatgg attcgtgggt ttgtaaccta
      421 gccgggaacg ggttattcac tacaaagaaa ttggcgacaa ttattgacga caaacttatt
      481 tgtaccggat ctagttcgaa tgaggaattt atgaaaaatc acttgttacc tattaaagtt
      541 tcaatcttca tatggagggt actaagaaga cggattccag ttcgtaccga acttgataaa
      601 agaggtatag accttgattc cgttaggtgc cctctatgtg atgatgatgt ggagactatt
      661 gatcatactt tgttcttttg tcgacatgcg atggagattt gggatcgggt gtataaatgg
      721 tggggtctag gaacggtttc aaacctaaga attaatgagg cctttagagg caagtgtaat
      781 cgttccttat cctctttatg gtcgagtata tggcaatcta tcgagtggac gtgcgcttat
      841 ctaatatgga ataatcggaa ccaaaaagtg ttttccaact catcatggaa tggtcctacg
      901 ggtctaatgg agatacaact taagtctttt gaatggatct catgtcgcat taggaatcgg
      961 aagatggatt ggctaggttg gatctcggat ccatggtctt gttttgtcta a
//
LOCUS       XM_071830716             519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840451), mRNA.
ACCESSION   XM_071830716
VERSION     XM_071830716.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..519
                     /gene="LOC139840451"
                     /note="uncharacterized LOC139840451; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840451"
     CDS             1..519
                     /gene="LOC139840451"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686817.1"
                     /db_xref="GeneID:139840451"
                     /translation="MNDYPTIMLEAVASYDNWIWHAYFGVAGSNNDINVLNTSDLFNS
                     MLNEEMSDVPYQINGVHYSRGYYLADGIYPTWAAFVKGFSSAVDEKRTYFTKKQASAR
                     KDVERTFGILQGRWHILQQPARAYELSPSNIYNVRGSIGATLEQEERGGYVIEKCMKA
                     YDLIWLNICGSS"
     misc_feature    <10..387
                     /gene="LOC139840451"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgaatgatt acccaactat tatgcttgaa gcggtcgcct cgtatgataa ttggatttgg
       61 catgcgtatt ttggtgtagc gggttcaaac aacgatatta atgtgctaaa cactagtgat
      121 ttgttcaact caatgcttaa tgaggaaatg tctgacgttc cttatcaaat aaacggggtt
      181 cattatagca gggggtatta tttagctgac ggtatttacc caacttgggc ggcatttgtt
      241 aagggatttt caagtgccgt tgacgaaaaa cgtacttact ttacaaagaa acaagcgagt
      301 gctcgcaagg atgttgaaag aacgtttggg atcctacaag gccgttggca tattcttcag
      361 caacccgcac gagcttacga gttgagcccg tccaacatat acaacgtacg tggatcgata
      421 ggtgcgacgc tcgagcaaga agaacgaggg ggttacgtga tagagaagtg catgaaggca
      481 tacgatctga tttggttgaa catttgtgga tcttcgtga
//
LOCUS       XM_071830717            2031 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyphenol oxidase,
            chloroplastic-like (LOC139840452), mRNA.
ACCESSION   XM_071830717
VERSION     XM_071830717.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2031
                     /gene="LOC139840452"
                     /note="polyphenol oxidase, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840452"
     CDS             1..1833
                     /gene="LOC139840452"
                     /codon_start=1
                     /product="polyphenol oxidase, chloroplastic-like"
                     /protein_id="XP_071686818.1"
                     /db_xref="GeneID:139840452"
                     /translation="MSYQLCSTLTPFPSKLITTTRTNQNGFKVSCNAAPQNADNHNEN
                     NLVDRRNLLLGLGGICTATSLTSLPSAFADPITTPDISTNCKDAGSGVKNIEEAFRGL
                     KCCPPNIGKTIKPFTFPTEETIRMRWPAHTGSQENIKKYKKAINIMRHELPDEHPHSF
                     NSQARIHCAYCNGGYTQVATHHPEIELSIHNSWLFFPFHRWYLYFYERILGKLINDPT
                     FALPYWNWDDPEGMQIPAIFGTEGIPNPYLRESNGSLLGNNPLYDKYRNPHHQQPPLV
                     DLSYSGKDGDRTIDLQKKCNFFTVYRDLIRNGTDAKSFFGGRYVSGSEPVANGDKSVG
                     SVEAGSHTAVHIWVGDPNQPNGEDMANFYSAGYDPLFYAHHSNVDRMWVLWKELGIRG
                     HKEPKDNDWLNASYVFYDENEELVRVYNKDCVDPAKLKFGYERSKSEMPWRKSRPNIR
                     IENNPKPAKVSSRDVKTVDRIKFPAKLEMEVPILSVKVKRPAVNRTPADKEKSNEILF
                     INGIRFNSNKFVKFDVFVNDNLKDDKLSTPCDVEFAGTFAQVPHGDKRRMFMYSGARF
                     GLDELLEDTKTEDEEYAIVNLVSRAGCDDLTVSGIEIKLVPIED"
     misc_feature    469..1164
                     /gene="LOC139840452"
                     /note="Common central domain of tyrosinase; Region:
                     Tyrosinase; pfam00264"
                     /db_xref="CDD:425566"
     misc_feature    1192..1341
                     /gene="LOC139840452"
                     /note="Polyphenol oxidase middle domain; Region: PPO1_DWL;
                     pfam12142"
                     /db_xref="CDD:463470"
     misc_feature    1417..1815
                     /gene="LOC139840452"
                     /note="Protein of unknown function (DUF_B2219); Region:
                     PPO1_KFDV; pfam12143"
                     /db_xref="CDD:371919"
ORIGIN      
        1 atgtcttatc aactttgctc cacactcaca ccttttccat ccaaactaat aactacgacc
       61 cgaaccaacc aaaacgggtt caaagtatca tgcaatgccg caccacaaaa tgccgataat
      121 cataacgaaa acaatctagt agacagaaga aaccttctcc ttggccttgg gggcatttgc
      181 accgcaacca gtctcacttc tttaccatca gcatttgctg atcccataac aactcctgat
      241 atttctacca actgcaagga cgctggttcc ggcgttaaaa atatcgaaga ggcgttcagg
      301 ggactaaaat gttgcccgcc taacatcggg aaaacaatta aacccttcac gtttcctacc
      361 gaagaaacca tcaggatgag atggccagct catactggct cccaagaaaa catcaaaaaa
      421 tacaaaaaag caatcaatat tatgagacat gaactccccg atgaacaccc tcacagcttc
      481 aatagtcaag caagaataca ctgcgcttat tgtaacggcg ggtacacaca agttgcaacc
      541 catcaccccg aaatcgaatt atctattcat aactcatggc tgttttttcc gtttcatcgt
      601 tggtatcttt acttttacga aagaatactg ggaaagttaa ttaacgatcc aactttcgcg
      661 ttaccttact ggaactggga cgatcccgag ggtatgcaga ttcccgccat ttttggtacc
      721 gaaggcatac caaacccgta tttacgcgaa agtaacgggt ccttacttgg aaataaccca
      781 ttgtatgata aataccgtaa cccgcatcat cagcaaccac cattagtaga tctgtcatat
      841 agcggtaaag atggtgacag aacaattgat ttacaaaaga aatgcaattt ttttacagtg
      901 taccgcgatt taatacgtaa cggaactgat gcaaagagtt tctttggagg cagatacgta
      961 tctgggagtg agcctgttgc taacggtgat aaatcagtcg ggtcagtgga agcgggttcg
     1021 catactgcgg tacacatatg ggttggtgac ccgaatcaac ctaacggtga ggatatggct
     1081 aacttttatt cagccgggta cgacccgttg ttttatgccc accactcgaa tgtggatcgt
     1141 atgtgggtac tatggaagga gttaggcatt cgtggacaca aggagccgaa ggataacgat
     1201 tggctaaacg catcgtacgt gttctacgat gagaatgagg aactcgtgcg tgtttacaac
     1261 aaagactgtg ttgatcctgc caagctgaaa ttcgggtacg aacggtccaa gtctgaaatg
     1321 ccatggcgta agagtcgtcc aaatatcaga atagaaaata atccaaaacc cgcaaaagtt
     1381 tcgtcccggg atgttaaaac ggtggacagg attaagttcc cggctaagct ggaaatggag
     1441 gtgccaattt tgtcggtgaa agtgaaacgg ccagctgtta atagaactcc agcggacaag
     1501 gagaaatcga atgagatctt gtttataaat ggaattagat ttaatagtaa caagtttgtc
     1561 aagtttgatg tgtttgtgaa cgacaacctt aaagacgata agctgtcgac gccgtgtgat
     1621 gtcgagtttg ctggtacttt tgcgcaggtc ccacatggcg ataagaggag aatgtttatg
     1681 tatagtggtg cgagattcgg gttagatgag ttattggagg acactaaaac agaagatgaa
     1741 gagtatgcga ttgtgaattt ggtgtcgaga gctggatgtg atgatctcac tgtttctggg
     1801 attgagatca agttggttcc tattgaggac taaattaatc gtatcttgct agctgcaaca
     1861 tcgatcgatc ttgttaatta attactgtaa taaagggaac gttgtacgta acaacgttta
     1921 ttgtgtttgt ttatttgtga actttgcgac catgaattgc atggctccgg ctcgccactt
     1981 cacgtgtaat aaaatttgtt gacaaattgg cccacttcac gtgtaataaa a
//
LOCUS       XM_071830719            1383 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable cyclic
            nucleotide-gated ion channel 16 (LOC139840453), partial mRNA.
ACCESSION   XM_071830719
VERSION     XM_071830719.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-236               JBITNF010000004.1  18823857-18824092   c
            237-268             JBITNF010000004.1  18800445-18800476   c
            269-335             JBITNF010000004.1  18753597-18753663   c
            336-447             JBITNF010000004.1  18753401-18753512   c
            448-684             JBITNF010000004.1  18753080-18753316   c
            685-1082            JBITNF010000004.1  18752290-18752687   c
            1083-1338           JBITNF010000004.1  18751543-18751798   c
            1339-1383           JBITNF010000004.1  18751496-18751540   c
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..1383
                     /gene="LOC139840453"
                     /note="probable cyclic nucleotide-gated ion channel 16;
                     The sequence of the model RefSeq transcript was modified
                     relative to its source genomic sequence to represent the
                     inferred CDS: deleted 2 bases in 1 codon; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139840453"
     CDS             <1..1383
                     /gene="LOC139840453"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: probable cyclic
                     nucleotide-gated ion channel 16"
                     /protein_id="XP_071686820.1"
                     /db_xref="GeneID:139840453"
                     /translation="YMMLVQVIGATWYLLAIERQYSCWKEECGKEENVTYPCNRVYFD
                     CDHVDEPGRDEWLERTQVLSNCSAESSPINFTFRIFGEAINDNPDRVTSATFFEKYFF
                     CFWFGLKSLSSYGQNLETSTSMGETLFSCGVCFGGLVIFCLLIGNMQTYLQSTTARLE
                     EWRVKRRDTEEWMRHRQLPPDLQDKIRRFVQYKWLATRGVDEENILRALPLDLRRQIQ
                     RHLCLAFVRRVPFFSQMDDDQLLDAICEHLVQSLSTKGQYLVREGDPVNEMTFVIRGQ
                     LESSTTNGGRSGFFNSITLKPGDFCGEELLTWALTPDLNVSLPSSTRTVKALNEVEAF
                     ALRAEDLRFVAKQFKRLHSKKLQHAFRHYSHQWRTWGACFIQAAWRRHKRKKLAEELA
                     RQEGLYQEDVDDDYGENDQNAQHLGATILASRFAANTRKGISHREAVANSATSSKDAQ
                     IFKPNEPDFS"
     misc_feature    <229..480
                     /gene="LOC139840453"
                     /note="Ion transport protein; Region: Ion_trans;
                     pfam00520"
                     /db_xref="CDD:459842"
     misc_feature    691..1083
                     /gene="LOC139840453"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
                     cd00038"
                     /db_xref="CDD:237999"
     misc_feature    order(904..909,961..969)
                     /gene="LOC139840453"
                     /note="ligand binding site [chemical binding]; other site"
                     /db_xref="CDD:237999"
     misc_feature    order(1048..1056,1066..1074)
                     /gene="LOC139840453"
                     /note="flexible hinge region; other site"
                     /db_xref="CDD:237999"
ORIGIN      
        1 tatatgatgt tagtgcaggt tattggagct acatggtatc tactggctat tgagaggcaa
       61 tactcatgtt ggaaagaaga atgtggaaag gaagaaaacg taacttatcc ttgcaatcgt
      121 gtgtactttg attgtgacca tgtggatgaa ccaggtcgtg atgagtggtt agagagaact
      181 caagttttga gtaattgtag tgctgaatct agccctataa attttacttt ccgaatattt
      241 ggtgaggcaa tcaacgataa ccccgataga gttacgtctg caacgttctt tgaaaaatac
      301 ttcttttgct tttggtttgg cttgaaaagt ctaagttcat acggtcaaaa cttggagaca
      361 agtactagta tgggggaaac actcttcagt tgtggtgttt gctttggagg cttagttatt
      421 ttctgtttgc ttattggaaa tatgcagaca taccttcaat ctacaacagc aagactcgaa
      481 gagtggaggg tcaaaagaag ggacactgaa gaatggatga ggcatcggca attgccaccc
      541 gatttacaag ataagatccg taggttcgtt caatacaaat ggcttgctac gagaggtgta
      601 gatgaagaaa atatccttcg tgctttacct ctcgacctta gacgtcaaat tcaaagacac
      661 ctttgcttag cttttgttcg tcgtgttcct ttcttctcac agatggatga tgatcagctg
      721 ttagatgcga tatgtgaaca cttggttcag tcattgagca caaaaggtca atacttggtt
      781 cgtgaagggg acccagtcaa cgagatgact ttcgtgataa gaggtcaact cgagagctct
      841 acaactaatg gagggcggtc tggattcttt aattcgatca ctctcaaacc tggtgacttt
      901 tgtggtgaag aattgttgac ttgggctttg actccagacc tcaatgtcag tctcccgtcc
      961 tctacccgaa ccgtgaaagc tctaaatgaa gtcgaagcat ttgcactgcg agcagaagac
     1021 ttaagattcg tggctaaaca attcaaacga cttcatagta aaaagttaca acatgctttc
     1081 aggcactact cgcaccagtg gaggacatgg ggagcatgtt ttatacaagc tgcttggaga
     1141 agacataaaa gaaaaaaact ggctgaagaa ttagcaaggc aagaaggctt ataccaagaa
     1201 gatgtcgatg atgattatgg cgaaaacgac caaaatgccc agcatttggg agctactata
     1261 ttggcttcaa gatttgctgc aaacactaga aaagggatta gccatagaga agctgttgca
     1321 aattctgcta catctagcaa agatgcccaa atttttaagc caaatgaacc cgatttctct
     1381 tga
//
LOCUS       XM_071830720            2019 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable cyclic
            nucleotide-gated ion channel 16 (LOC139840454), mRNA.
ACCESSION   XM_071830720
VERSION     XM_071830720.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2019
                     /gene="LOC139840454"
                     /note="probable cyclic nucleotide-gated ion channel 16;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 57 Proteins"
                     /db_xref="GeneID:139840454"
     CDS             1..2019
                     /gene="LOC139840454"
                     /codon_start=1
                     /product="probable cyclic nucleotide-gated ion channel 16"
                     /protein_id="XP_071686821.1"
                     /db_xref="GeneID:139840454"
                     /translation="MNYIRLPSTTIISKSTTNSLTSNNQKDSWWSQIFDPGGQFITRW
                     NHMFLITCLNALFVDPLYFLVPEISRRKYCMRSDYGFAAIITVWRCLIDVISFIHIFI
                     KFRTAYVAPNSRVFGRGDLVMDPKKIAVRYLKSGFAVDLAAALPLPQIFIWFVIPAVR
                     SPTAAHANHSISLVIIIQYIPRLFVIFPLNQRITKHTGVIAKTAWAGAAYYIMLYMLA
                     SHVIGATWYLLAIERQYSCWKEECGKEENVTYPCNRVYFDCDHVDEPGRDEWLERTQV
                     LSNCSAESSPINFTFGMYGPAFTEGVTSATFFEKYFFCFWFGLKSLSSYGQNLETSTS
                     MGETLFSCGVCLGGLVIFCLLIGNMQTYLQSTTARLEEWRVKRRDTEEWMRHRQLPPD
                     LQDKIRRFVQYKWLATRGVDEEDILRALPLDLRRQIQRHLCLALVRRVPFFSQMDDDQ
                     LLDAICEHLVQSLSTKGQYLVREGDPVNEMTFVIRGQLESSTTNGGRSGFFNSITLKP
                     GDFCGEELLTWALTPDPNVSLPSSTRTVKALNEVEAFALRAEDLRFVAKQFKRLHSKK
                     LQHAFRYYSHQWRTWGACFIQAAWRRHKRKKLAEELARQEGLYQDDDDDDYGENDQNA
                     QHLGATILASRFAANTRKGISHREAVANSATSSLKMPKLFKPNEPDFS"
     misc_feature    271..>1704
                     /gene="LOC139840454"
                     /note="Voltage-dependent potassium channel; Provisional;
                     Region: PLN03192"
                     /db_xref="CDD:215625"
     misc_feature    1324..1722
                     /gene="LOC139840454"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; Region: CAP_ED;
                     cd00038"
                     /db_xref="CDD:237999"
     misc_feature    order(1537..1542,1594..1602)
                     /gene="LOC139840454"
                     /note="ligand binding site [chemical binding]; other site"
                     /db_xref="CDD:237999"
     misc_feature    order(1681..1689,1699..1707)
                     /gene="LOC139840454"
                     /note="flexible hinge region; other site"
                     /db_xref="CDD:237999"
ORIGIN      
        1 atgaactaca ttcgtctccc atcaacaact ataatctcca aatccacaac aaattcactc
       61 acctctaata accaaaaaga ttcatggtgg tctcaaattt tcgacccggg tggccaattc
      121 attacaagat ggaaccacat gtttttaatt acctgtctca atgctctttt tgtcgatcct
      181 ttatattttc tcgttcccga gatctcgaga cgaaagtatt gtatgcggtc agattatgga
      241 tttgcagcaa tcatcactgt gtggcggtgt ttaattgacg taatatcgtt tattcatatt
      301 tttatcaagt ttcgtacggc ttacgtggcc ccgaattcta gagttttcgg aagaggggat
      361 cttgttatgg atcctaaaaa aatcgctgta cgttatttaa agtctggttt cgctgttgat
      421 ttagctgccg ctcttccatt gcctcagatt ttcatttggt ttgttattcc agctgttaga
      481 agtccaacag ctgctcacgc gaaccattct atttcgctcg ttattatcat tcaatatatc
      541 ccgcgactgt ttgttatttt tccgttgaac caacggatta ctaaacatac gggtgtaatc
      601 gcgaaaactg cttgggctgg tgcagcttac tatatcatgc tttatatgct agctagtcat
      661 gttattggag ctacatggta tctattggct attgagaggc aatactcgtg ttggaaagaa
      721 gaatgtggaa aggaagaaaa cgtaacttat ccttgcaatc gcgtgtactt cgattgtgac
      781 cacgtggatg agccaggtcg tgatgagtgg ttagagagaa ctcaagtttt gagtaattgt
      841 agtgccgaat ctagccctat aaattttact ttcggaatgt atggtccagc cttcactgaa
      901 ggagttacgt ctgcaacctt ctttgaaaaa tacttctttt gcttttggtt tggcttgaaa
      961 agtctaagtt catacggcca aaacttggag acaagtacta gtatggggga aacactcttc
     1021 agctgtggtg tttgccttgg aggcttagtt atattctgtt tgctcattgg aaatatgcag
     1081 acctaccttc aatctacaac agcaagactc gaagagtgga gggtcaaaag aagggacacc
     1141 gaagaatgga tgaggcatcg gcaattgcca cccgatttac aagataagat ccgtaggttc
     1201 gttcaataca aatggcttgc tactagaggt gtagatgaag aagatatcct tcgtgcttta
     1261 cctctcgacc ttagacgtca aattcaaaga cacctttgct tagctcttgt tcgtcgtgtt
     1321 cctttctttt cacaaatgga tgatgatcag ctcttagacg cgatatgtga acacttggtt
     1381 cagtcattga gcacaaaagg tcaatacttg gttcgtgaag gggacccagt caacgagatg
     1441 actttcgtga taagaggtca acttgagagc tctacaacta atggagggcg gtctggattc
     1501 tttaattcga tcactcttaa acctggtgac ttctgtggtg aagaattgtt gacctgggct
     1561 ttgactccag accccaatgt tagtcttccg tcctctaccc gaaccgttaa agctctaaat
     1621 gaagtcgaag catttgcact gagagcagaa gacttaagat tcgtggctaa acaatttaaa
     1681 cgacttcata gtaaaaagtt acaacatgct ttcaggtact actcgcacca gtggaggaca
     1741 tggggagcat gtttcataca agctgcttgg agaaggcata aaagaaaaaa actggctgaa
     1801 gaattagcaa ggcaagaagg cttataccaa gatgatgacg atgatgatta tggcgaaaat
     1861 gaccaaaatg cccaacattt gggagctact atattggctt caagatttgc tgcaaacact
     1921 agaaaaggga ttagtcatag agaagctgtt gcaaattctg ctacatcaag cttaaagatg
     1981 cccaaattgt ttaagccaaa cgaacccgat ttctcttaa
//
LOCUS       XM_071830721             537 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840455), mRNA.
ACCESSION   XM_071830721
VERSION     XM_071830721.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..537
                     /gene="LOC139840455"
                     /note="uncharacterized LOC139840455; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840455"
     CDS             1..537
                     /gene="LOC139840455"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686822.1"
                     /db_xref="GeneID:139840455"
                     /translation="MSGDESEVSTTMISKLDFGNPLYLHASDISSTPLINFKLKGTEN
                     YKLWACAMELALQTKNKLDFINGTLEKDVEDEVLSNQWERCNAVILSWILGCISNELY
                     YGQIYSKLASVVWEELRETYDKVDGSVLFNLEQKISLLTQNGTPVSDYYHKLNSLWKQ
                     YDILCKLPHVNVMLIRKE"
     misc_feature    73..213
                     /gene="LOC139840455"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
ORIGIN      
        1 atgtctgggg atgagagtga agtatctact accatgataa gtaaattgga ttttggtaat
       61 cctctttatt tacatgctag tgatattagc agtacacctt taatcaattt taaacttaaa
      121 ggaacagaaa attataaatt atgggcttgt gctatggaat tggctttaca aactaagaac
      181 aaacttgatt ttataaatgg aactcttgaa aaagatgttg aagatgaagt tctttctaat
      241 caatgggaaa ggtgtaatgc tgtgatttta tcttggatct taggttgtat ttctaatgaa
      301 ttgtattatg gtcaaatcta ttctaagttg gcttctgttg tttgggagga attaagggaa
      361 acttatgata aagtagatgg ttctgttctg tttaatcttg aacaaaagat ttcattgtta
      421 actcaaaatg gtactcctgt atcagattat tatcataaat tgaactcact atggaaacaa
      481 tatgatattc tgtgtaaatt acctcatgtc aatgtgatgc tgataagaaa agaatag
//
LOCUS       XM_071830722             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840457), mRNA.
ACCESSION   XM_071830722
VERSION     XM_071830722.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139840457"
                     /note="uncharacterized LOC139840457; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840457"
     CDS             1..441
                     /gene="LOC139840457"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686823.1"
                     /db_xref="GeneID:139840457"
                     /translation="MATDSNHDLPSPSSSIINRRYCFCIPYTWQKVRSSDYNYSEQKT
                     IWSRGVTALKKLREWSEIVAGPRWKNFIRRFNRNKSFGNKSSQFQYDPLGYALNFDEG
                     PYETGDSDLENEYMIRNFSSRYALRTKISANSKTTSDSIGPNFV"
ORIGIN      
        1 atggcgactg actcaaatca tgacctacca tcaccgtcat cttcaatcat taaccgccgt
       61 tactgtttct gtatcccgta tacctggcaa aaagtccgtt catcagatta caattactct
      121 gaacaaaaaa caatttggtc acgtggagtc accgctttaa aaaagcttcg ggagtggtct
      181 gaaatagtcg ccggtccacg ctggaaaaac tttattcgcc gtttcaaccg caacaaaagt
      241 ttcggtaata aatcgtctca gtttcaatac gatccgttag gttatgcgct taatttcgat
      301 gaaggaccgt atgaaaccgg cgattcagat ttggagaacg agtacatgat tcgcaatttc
      361 tcgtcgcggt acgcgttacg aacgaaaatt tcggcgaatt ctaaaacgac gtcggattca
      421 atcggaccga atttcgtgta a
//
LOCUS       XM_071830723            1230 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840458), mRNA.
ACCESSION   XM_071830723
VERSION     XM_071830723.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1230
                     /gene="LOC139840458"
                     /note="uncharacterized LOC139840458; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840458"
     CDS             1..1230
                     /gene="LOC139840458"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686824.1"
                     /db_xref="GeneID:139840458"
                     /translation="MARDKSCLEDKRKSRCKNCGSRTGSKHTVQISKSHGNASSADHS
                     ISSVEILSVNVRGFGVEGKFGWVKVLCCAERLDVAVFQETKCRNLEDGWVQNLWGINH
                     FGYAQREAIGNSGGMLVIWDSSRFTVNNAFGNSFFIAIRGVWIGSGVESLIVNIYGPH
                     SDRDKKEMWLDLDKLLQGVDYPCVLCGDFNEVRLPSELLNCRFNKVRASRFNDFIDRN
                     FLIEIPINGRRFTRISDNGLKFSKLDRFLVNEKFIELWDDLSIMILDRRESDHCPLIL
                     RDKRIDFGPKPFKVFDEWLNRDGIDRIIIEAWGKCVRSTRKDCVFRDKLKNVKCDLRT
                     WSKSEFGIIDREIKGLKDEVDKWEVRAEQGGLNDVDRECWLNCRRKWIDKEKSKANML
                     RQKARIKWVLEGDENTK"
     misc_feature    148..831
                     /gene="LOC139840458"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(160..162,247..249,469..471,562..564,568..570,
                     730..732,808..813)
                     /gene="LOC139840458"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(247..249,808..810)
                     /gene="LOC139840458"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(469..471,568..570,811..813)
                     /gene="LOC139840458"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atggctagag ataaatcatg tctggaggat aaaaggaaat cgagatgcaa aaattgtgga
       61 tccaggactg gaagtaagca tactgtccaa atttcaaaat ctcacggtaa tgcttcatcg
      121 gctgatcatt caattagcag tgtggaaata ctctctgtta atgttcgtgg tttcggagtt
      181 gaagggaaat ttgggtgggt caaggtctta tgttgtgcgg aaaggcttga tgtggccgtt
      241 tttcaggaaa caaagtgtag aaacttagaa gacgggtggg tgcaaaacct ttggggtatt
      301 aatcactttg gttatgccca gagagaagct atagggaatt ccgggggtat gttagtaatc
      361 tgggactctt ctaggttcac ggtaaataat gcgtttggaa atagtttctt cattgcaatt
      421 cggggggttt ggatcgggtc tggtgttgaa tccttaattg tcaacattta tggaccccat
      481 tccgatagag ataagaaaga gatgtggtta gatttagaca aacttctgca gggtgttgat
      541 tatccgtgtg tcttatgtgg tgactttaac gaagtacgat tgccttcgga actgttaaat
      601 tgtagattca ataaagtgcg tgcttctcgt tttaatgact tcattgatag gaattttttg
      661 attgagatac cgattaacgg tagacgattt actcgtatca gtgataatgg tttgaaattt
      721 agcaagctcg ataggttcct tgtaaatgaa aagtttattg agctttggga cgacctctcg
      781 attatgattt tagatagaag ggaatcggac cattgtcccc ttatccttag ggacaagcgt
      841 attgattttg ggccgaaacc ttttaaagtg ttcgacgaat ggttgaatcg tgatggaatt
      901 gatcggatca ttatagaggc ttggggtaag tgtgtccgta gcactagaaa agattgtgtt
      961 tttagggata aacttaaaaa tgttaaatgt gatttgagga cttggagtaa aagtgaattc
     1021 gggattattg atcgagaaat aaaaggattg aaagacgagg tcgataaatg ggaagttaga
     1081 gccgagcaag ggggtctaaa tgatgtagat agagagtgtt ggttaaattg ccgtaggaaa
     1141 tggattgata aagagaaatc taaggcaaat atgcttagac aaaaggctcg gattaagtgg
     1201 gtattggaag gcgatgagaa tacgaaataa
//
LOCUS       XM_071830724            1254 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840459), mRNA.
ACCESSION   XM_071830724
VERSION     XM_071830724.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1254
                     /gene="LOC139840459"
                     /note="uncharacterized LOC139840459; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840459"
     CDS             1..1254
                     /gene="LOC139840459"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686825.1"
                     /db_xref="GeneID:139840459"
                     /translation="MTWVPQTQNPEPPQTQEPEPTQNPEPIQTPTPNPEPTPDHEPTE
                     TISPNHEITETSSNNEPQPHEEQNDTNSDETTQRYVLPQRINRGVPPKRYSPEKEAQR
                     SRYPMANIAQGNLSKEAQKFNSAIYSENIPTSVEQAFKSKDWKKAIEVEMKALNDNDT
                     WEKCVIPQGKKPVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAK
                     IDTIRVHHTEAVMRIIRYLKKTVGNGVVFKKNGHLEAQVYTDASWAGEKGDRRSTSGF
                     FTIVGGNLVAWKSKKQKVVSLSSAESEFRGIAKGVVEALWIRKLLIEIGFPPKEAIRI
                     LCDNEAAIAISENPVQHDRTKHVEVDRHFIREKLDAEIISLPHIRSEDQLADILTKLA
                     NGSLFSEVLGKLNIGNPTIQLEGEC"
     misc_feature    472..>672
                     /gene="LOC139840459"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    766..1170
                     /gene="LOC139840459"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(778..789,892..900,907..909,1009..1011,1087..1089,
                     1168..1170)
                     /gene="LOC139840459"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgacatggg tacctcaaac tcaaaaccct gaaccacctc aaacacaaga gcccgagcca
       61 acacaaaacc ccgaacctat acaaactcca acaccaaacc ccgagccaac accagaccat
      121 gaacccacag aaactatctc accaaaccat gagattactg aaacctcctc gaacaatgaa
      181 cctcaacccc atgaggaaca aaatgacacc aattccgatg aaaccaccca acgatatgtc
      241 ctacctcaaa gaatcaatag aggtgtccca cctaaacggt actctccaga aaaagaagca
      301 caaagatcta gatatcctat ggctaatata gcacaaggaa atctgtcaaa agaagctcaa
      361 aaatttaatt ccgcaattta ctctgaaaat attccaactt ctgttgaaca agcgttcaaa
      421 tcaaaagact ggaaaaaagc aatagaagtt gaaatgaaag ctctgaatga taatgacact
      481 tgggaaaagt gtgtcatacc tcaaggaaag aaaccagtgg gatgtcgatg ggtatttacg
      541 ataaaatata aacccgatgg aactattgaa agatacaaag cacgactggt tgcgaaaggg
      601 tacactcaga catacgggat tgattactcc gaaacttttt caccagtcgc aaagattgat
      661 accattaggg ttcaccatac ggaagctgta atgaggatca tcagatactt aaagaaaaca
      721 gtaggcaatg gagttgtatt caaaaagaat ggtcaccttg aagcgcaagt ttatacagat
      781 gcaagttggg ccggagaaaa aggagataga cgatcaactt ccggtttctt cacaatagtt
      841 ggaggaaact tagttgcgtg gaagagtaag aaacaaaagg tcgtttcttt atcaagcgct
      901 gaatcagaat ttagaggaat cgcaaaggga gtggtggaag ctttatggat tcgaaaactc
      961 ttgatagaaa taggattccc tccaaaagaa gctattcgga tcctttgcga taatgaagca
     1021 gcgatcgcta tctcagaaaa tccagttcaa catgatcgaa caaaacatgt tgaagtggat
     1081 agacacttta tcagagaaaa gttggatgca gaaataattt ctttaccaca tataagatca
     1141 gaagaccaat tggccgacat cctcaccaaa ttagccaacg gaagtctctt cagtgaagtt
     1201 cttggcaagt tgaatatcgg gaatcccact attcaacttg agggggagtg ttag
//
LOCUS       XM_071830725            1725 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            5.10-like (LOC139840460), mRNA.
ACCESSION   XM_071830725
VERSION     XM_071830725.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1725
                     /gene="LOC139840460"
                     /note="protein NRT1/ PTR FAMILY 5.10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139840460"
     CDS             1..1725
                     /gene="LOC139840460"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 5.10-like"
                     /protein_id="XP_071686826.1"
                     /db_xref="GeneID:139840460"
                     /translation="MSPKRVNSNFDFDMDDNDTVGKKSPPVNKLVNGVVDYKGRPVLR
                     SKSGCWRSAYFIIGVEVAERFAYYGASASLMIYLTKRLKQSTVTAAENVNVWSGTASL
                     LPLLGSFIADGFIGRYRMIIFASLLYVMALALLAFSTLLPSDCKNAVDTSSCSPHIQV
                     IMFFISLYLMAFAQGGHKPCVQAFGADQFDADDPEELKAKSSFFNWWYFGLCFGSIVG
                     IFVISIIQENLSWGMGFGIPCIIMGFALIIFLLGTMTYRFAERIEGKNGFVRIGRVFV
                     NAVRNWRTTNVTISSEEESRQGSHQFRFLNKALLSHDGSNKDGTFCNIDEVEEAKAVI
                     RLVPIWVSCLAYGIVFAQAATFFTKQAATMDRSIGSHFHIPAAALQGFIGLSIMILIP
                     VYDTVLVPLTRSITNKPSGITMLQRIGTGIVISIISMVLAALVETKRLKTAHEHGLLD
                     DPSATIPMKIWWLVPQYLLAGASDVFTIVGMQEFFYGEMPSDLKSVGLALYLSVMGIG
                     SFLSSFVISVVHKTTSRNGQDGWISNNLNRAHIDYFYYLLAGISFGALLIFIYAAKSY
                     IYNRGRAS"
     misc_feature    148..1704
                     /gene="LOC139840460"
                     /note="NRT1/PTR family (NPF), subfamily 5 of the Major
                     Facilitator Superfamily of transporters; Region: MFS_NPF5;
                     cd17417"
                     /db_xref="CDD:340975"
     misc_feature    order(187..192,199..204,211..213,310..312,520..525,
                     529..537,544..546,622..624,631..636,643..645,1027..1029,
                     1036..1041,1048..1056,1063..1065,1159..1161,1171..1173,
                     1417..1422,1432..1434,1444..1446,1492..1494,1501..1506,
                     1513..1518,1525..1527)
                     /gene="LOC139840460"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340975"
ORIGIN      
        1 atgagcccca aaagagtaaa ttctaatttt gactttgaca tggatgacaa tgacaccgtt
       61 ggaaaaaagt ctccaccggt caacaaatta gtcaacggcg tcgttgacta caaaggtcgt
      121 ccagtcctcc gatccaaatc cggttgctgg cgatctgcat atttcatcat cggtgttgaa
      181 gttgcggaga gatttgcata ttatggtgct agtgcaagtt tgatgattta tttgactaaa
      241 cggttaaagc agtcaacggt aacggcggcc gagaatgtga acgtgtggtc cggaacggcg
      301 tcacttcttc cgttacttgg atccttcatt gctgatggtt ttattggtcg atatcgaatg
      361 attattttcg cttctctcct ttatgttatg gcacttgcat tgttggcttt ttcaactttg
      421 cttccttctg actgtaaaaa tgccgttgat acctcatcgt gttcacctca catccaagtt
      481 atcatgtttt tcatatcttt atatcttatg gcgtttgctc aaggcgggca caagccatgt
      541 gttcaggctt ttggtgctga ccagtttgat gcagacgatc cagaagaact caaagccaaa
      601 agctcgttct tcaattggtg gtattttgga ttgtgtttcg ggtccatagt aggaatcttt
      661 gttattagta tcattcaaga aaaccttagt tggggcatgg gatttgggat tccatgcatt
      721 atcatggggt ttgccctgat tatattcttg cttggaacaa tgacttaccg atttgcagag
      781 agaattgaag gtaaaaatgg ttttgtgaga attggccgtg tgtttgttaa tgcggtaagg
      841 aattggcgaa ctacaaatgt aacaatatct tctgaagaag aatctcgtca aggttctcac
      901 cagttcaggt ttctaaataa agctttgtta tcccatgatg gatcaaataa agatggaacg
      961 ttctgtaaca tcgatgaggt ggaagaagct aaggccgtta ttagactagt tccgatatgg
     1021 gttagctgtt tagcgtacgg aatcgtattt gctcaagctg ccacattttt tactaaacaa
     1081 gcagctacaa tggacaggtc aattggatca cattttcata ttccagcagc cgcattacaa
     1141 ggtttcatcg gcctctctat catgatcctt atacccgtct atgataccgt cttggttcct
     1201 cttactagat ctattacaaa caaaccatct ggtattacaa tgcttcaaag aatcggaacc
     1261 ggcattgtta tatccattat ttcaatggtc cttgcggcac tcgttgagac aaaaagactc
     1321 aaaactgctc acgagcacgg tttattagat gatccgagtg ctacgattcc aatgaagata
     1381 tggtggttgg tacctcaata tctgttggct ggagctagtg atgtatttac gattgtgggt
     1441 atgcaagagt ttttttatgg cgaaatgccg agtgatctca agagtgtggg tttagcgctt
     1501 tatcttagtg tgatgggaat cggtagcttt ttgagcagtt ttgtcatttc agttgttcat
     1561 aaaacaacaa gtaggaatgg acaagatggt tggatatcta acaacttgaa tcgagctcat
     1621 atagactatt tttactacct tcttgctggt attagctttg gagcactttt gatctttata
     1681 tatgctgcta aatcttacat atataatcga ggtagagcct cgtaa
//
LOCUS       XM_071830726             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            5.10-like (LOC139840461), mRNA.
ACCESSION   XM_071830726
VERSION     XM_071830726.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139840461"
                     /note="protein NRT1/ PTR FAMILY 5.10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139840461"
     CDS             1..603
                     /gene="LOC139840461"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 5.10-like"
                     /protein_id="XP_071686827.1"
                     /db_xref="GeneID:139840461"
                     /translation="MGINDKQTLGLLAFSTLLVGGSSVSPQLQVIVFLISLYLVAFAQ
                     SGHKPCVQVFGADQFDADNTEERKAKSSFFNWWYFGTYAGPTIGIFVLSYIQDNFSWA
                     LGFGIPCIIMGFALIIFLLGTGSYRFEEKTEVRNGFVRIGQCILNGSDGSNLNVVRFL
                     NKALVTSDGSNEDGIICTIDEVEEAKAFLRLIPIWTSCLA"
     misc_feature    25..>600
                     /gene="LOC139840461"
                     /note="Major Facilitator Superfamily; Region: MFS;
                     cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 atgggaatta atgataaaca gacacttggt ttgctggctt tttcaacgtt gcttgttggc
       61 ggctcatcag tttctcctca actgcaagtt atcgtatttt taatatcgct atatcttgtg
      121 gcatttgcgc aaagcgggca caagccttgt gttcaggtct ttggggctga ccagtttgat
      181 gcagacaata cagaagaacg caaagccaaa agctcattct ttaactggtg gtattttgga
      241 acatacgcgg ggcctacaat cggaatcttt gttctaagtt acattcaaga caactttagt
      301 tgggctcttg gctttgggat tccttgcatc atcatgggct ttgccctcat tatattcttg
      361 cttggaacag ggtcataccg atttgaagag aaaaccgaag ttagaaatgg tttcgtgaga
      421 attggccagt gcatcttaaa tgggtcagat gggtcaaatt taaatgttgt aagatttctc
      481 aacaaagctt tggtaacctc tgatggatca aacgaagacg gaataatttg taccattgat
      541 gaggtggaag aagcaaaggc gtttcttagg ctaattccaa tatggacgag ctgtttagca
      601 tag
//
LOCUS       XM_071830727             492 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840462), mRNA.
ACCESSION   XM_071830727
VERSION     XM_071830727.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..492
                     /gene="LOC139840462"
                     /note="uncharacterized LOC139840462; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840462"
     CDS             1..492
                     /gene="LOC139840462"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686828.1"
                     /db_xref="GeneID:139840462"
                     /translation="MDFITKLPKTVNGYDTIWVIVDHITKSAHFFSMKETDKMEKLAQ
                     LYLKEVVSRHGWDRFLPLAEFSYNNSYHSSIQVAPFEALYGRKCRSPICWNKVGDRQL
                     TGPEIIHEMTEHIVKIKQRLETARSRQTSYADVRRKPLEFQENDMVLPKVSPWKGVIR
                     FGK"
ORIGIN      
        1 atggatttca ttacgaagtt gccaaaaact gtgaatggct atgatacgat ttgggtgatt
       61 gttgaccata tcactaaatc tgctcacttt ttctcgatga aggaaactga caagatggaa
      121 aagcttgctc agttgtattt gaaggaagtt gtttcaaggc atggatggga ccgattcctg
      181 ccattagctg agttttctta taataacagc tatcattcaa gtatccaagt tgcaccgttc
      241 gaggcactct atgggcgaaa atgtagatcg ccaatctgtt ggaataaagt gggtgaccga
      301 cagttgactg gtcccgagat catccacgag atgaccgaac acattgtaaa gattaagcaa
      361 aggctagaga cagcccgaag tcgtcaaacg agttatgctg acgttagaag aaaaccgtta
      421 gaattccaag aaaacgatat ggtcctgcca aaggtgtcac cgtggaaagg tgtgatacgc
      481 tttggcaaat ga
//
LOCUS       XM_071830728            1032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840463), mRNA.
ACCESSION   XM_071830728
VERSION     XM_071830728.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1032
                     /gene="LOC139840463"
                     /note="uncharacterized LOC139840463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840463"
     CDS             1..1032
                     /gene="LOC139840463"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686829.1"
                     /db_xref="GeneID:139840463"
                     /translation="MDWLSKNRAEVVCFEKAIHIPLDNGENLMVYGDKTGVKLNLISC
                     MKAQKYLRKGYQAILAHVKEIETEEKRIEDVPINFLGHHIPEELPGLPPHRFVEFQID
                     LVLGAAPVARSPYRLAPSRFIEGFSKIARPLTALTHKGKKYEWSNVYEAAFQLLKQKL
                     TFAPILSLPEGNDDFVVYCDASRQGFGCVLMQRQKVIAYASRQLKIHEQNYTTHDLEL
                     GAMVFTLKMWRHYLYGTKCTIFTDHKTNVVVDALSRKERVKPLQVRALNLIVHTNLTT
                     QIRDSQLEELKEENKKEESLRGLDKQFEIKGDGTRYFAGRIWVPRIGEVRKKVLDEAH
                     KTRRILLPM"
     misc_feature    433..717
                     /gene="LOC139840463"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atggactggt tgtctaagaa tagagccgaa gtcgtgtgtt tcgagaaggc gattcatata
       61 ccccttgata atggagagaa tttgatggtt tatggagata aaaccggcgt aaaacttaac
      121 ctgatttcat gcatgaaggc acaaaagtat ttaaggaaag gctatcaagc tatccttgca
      181 catgtgaaag agatcgagac cgaagaaaag cgaattgaag atgtaccaat taattttttg
      241 ggtcatcaca ttcccgaaga actacctggc cttccacctc atagattcgt agaattccaa
      301 atagatctcg tactcggagc tgcaccagtt gcacgatcac catatagatt agcaccatcg
      361 agattcattg aagggttctc aaaaattgca cgaccattga ctgccttgac tcataagggc
      421 aagaaatatg agtggtccaa tgtatatgaa gctgctttcc aacttctgaa acagaagtta
      481 acatttgctc ctatcctgtc cctacccgaa ggaaacgatg actttgttgt atactgtgac
      541 gcatctcgcc aaggttttgg ttgtgtcttg atgcaacgac aaaaggtcat tgcttacgcc
      601 tcccgtcaac taaagatcca cgaacagaat tacaccacac atgatttgga acttggtgca
      661 atggtcttca cgctcaaaat gtggagacac tatctttatg gaaccaagtg taccatcttt
      721 actgatcata agacaaatgt tgtggttgat gccctaagcc gaaaagaaag ggttaaaccc
      781 ttacaagtta gagctttaaa tctgattgtc cataccaatt tgactacaca aatccgagat
      841 tcccaacttg aagagcttaa agaagaaaat aagaaggaag aatctcttag aggtttagac
      901 aagcagttcg aaattaaagg agatggaact cgttattttg ctggaagaat ttgggtccca
      961 agaattggcg aagtaagaaa gaaagtgctt gatgaggcac ataagacaag gcggatattg
     1021 ctacctatgt ga
//
LOCUS       XM_071830729            1620 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-glycosyltransferase
            85C1-like (LOC139840464), mRNA.
ACCESSION   XM_071830729
VERSION     XM_071830729.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1620
                     /gene="LOC139840464"
                     /note="UDP-glycosyltransferase 85C1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139840464"
     CDS             163..1620
                     /gene="LOC139840464"
                     /codon_start=1
                     /product="UDP-glycosyltransferase 85C1-like"
                     /protein_id="XP_071686830.1"
                     /db_xref="GeneID:139840464"
                     /translation="METEPLIDQKRPHVVFIPFPAQSHIKCMLKLAKLLHYKGIHITS
                     INTKSSHVRLVKSGGIHDINGVPGFRFKTVQDSPTCDADDDGVEHTPTILELMTYLKE
                     NFYDSFLDLVSSLETPVTCIVCDGFMTFTNSIHAAEKLEVPIFLFWTMAACGFMGFYQ
                     SKVLVEKGLVPLKDESYLTNGYLEMEIDWIPGMEGIRLKDLPEFIRVTSPNDIAFTFL
                     LEVAQKADNVSHMIFHTFEDLEASLIEEIRFVFPNVYNVGPLQLLLNQKQESKSSEFS
                     GYSLRHEEPECVQWLESKEPNSVVYVNFGSIAVMSLQDLVELGWGLVNSKYEFSWIIR
                     NDLVDGKPSVLPKELEDAINEKGFVGSWCTQEEVLNHRSIGGFLTHGGWGSIIDSLSS
                     GVPMICCPFLGDQLTNCRQMCKKWEIGMEIEKNTKRDEVEKLLRMLMEGEEGKIMRNK
                     ALEWKKMAEMATGSCGSSSLDIEKLIDEITNLTKT"
     misc_feature    196..1554
                     /gene="LOC139840464"
                     /note="UDP-glycosyltransferases and similar proteins;
                     Region: GT1_Gtf-like; cd03784"
                     /db_xref="CDD:340817"
     misc_feature    order(229..234,238..240,769..771,778..783,793..795,
                     916..918,1078..1080,1300..1302,1306..1308,1312..1317,
                     1324..1326)
                     /gene="LOC139840464"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(229..231,1078..1080,1300..1302,1306..1308,
                     1312..1317)
                     /gene="LOC139840464"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    232..234
                     /gene="LOC139840464"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 tacattacag gatgcttctc tttctaatcg acatattagt cttacacaaa ttaaattact
       61 ataaatcaga tacactgata cacatactat taagccctat cttaggtaag tagtatttgt
      121 ttatttatct cgtggcaaat taacagaaac acacacatcg acatggagac agagccctta
      181 atagatcaga aaaggcctca tgtagtgttc ataccatttc cagcacaaag ccacatcaag
      241 tgtatgctca aactagccaa actactgcac tacaagggca tacacataac ttccatcaac
      301 actaaatcaa gccatgtgcg actcgtaaag tctggtggga ttcatgatat caatggagtt
      361 ccaggttttc gatttaaaac agttcaggat agtccaactt gtgatgcaga cgatgatggt
      421 gtcgaacata ctccaactat acttgagctc atgacctacc tgaaagaaaa tttctatgat
      481 tcatttcttg atcttgtatc tagccttgaa actccggtaa catgtatcgt ttgtgatggt
      541 ttcatgactt tcacaaattc gattcacgct gcagagaagc ttgaggttcc tatctttctt
      601 ttttggacca tggctgcttg tggattcatg gggttttatc agtcaaaagt tctagtggag
      661 aaaggactag tcccacttaa agatgaaagt tatttgacaa atggttatct tgagatggaa
      721 atagattgga ttccaggaat ggaaggtatc cgtttaaagg atttaccaga gttcatacga
      781 gtcactagtc cgaatgatat tgcatttaca tttctcctag aagttgctca aaaagccgat
      841 aacgtgtcac atatgatctt ccacactttc gaagacctag aagctagtct tatagaagag
      901 attagattcg tatttcctaa cgtctataat gttggaccac ttcaattact tttgaatcag
      961 aagcaagaaa gcaaaagctc ggaatttagt ggatatagtt tacgtcatga agagcccgag
     1021 tgtgttcaat ggctagagtc gaaagagcct aattctgtag tgtatgtcaa ctttggaagt
     1081 atagcagtaa tgtcgttaca agatcttgta gaactaggtt ggggacttgt taacagcaaa
     1141 tatgaatttt catggattat aagaaatgat ttggttgatg ggaaacctag tgttttacct
     1201 aaagaattag aggatgcgat aaacgagaaa ggatttgttg gaagttggtg tacacaagaa
     1261 gaggtcttga accatcggtc gattggtggg ttcttgactc atggtgggtg gggttcaatc
     1321 atcgatagct tgtcgtctgg ggtgcctatg atttgttgtc catttttggg tgaccaacta
     1381 acgaattgtc gacaaatgtg taagaaatgg gaaattggta tggagataga gaagaatacg
     1441 aagagggatg aagtggagaa gcttttgagg atgttaatgg aaggtgaaga aggtaaaata
     1501 atgaggaata aagctttgga gtggaagaag atggcggaaa tggctacggg ttcttgtgga
     1561 tcatcgtctt tagatataga gaaactcatt gacgaaatca ctaacttaac taaaacctag
//
LOCUS       XM_071830730             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840465), mRNA.
ACCESSION   XM_071830730
VERSION     XM_071830730.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139840465"
                     /note="uncharacterized LOC139840465; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840465"
     CDS             1..570
                     /gene="LOC139840465"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686831.1"
                     /db_xref="GeneID:139840465"
                     /translation="MAGSNNDLNVLNASPSFDSLLTDTAPQVPYEIGDVDFDRGYYLA
                     DGIYPSWASFVKGFSSVVAAKRKYFTKKQSAARKDVERTFGILKGRWGILRQPARAYS
                     VNAIKRIMYGCIILHNMIIEDNGFNIAENKSYYLPVNNLQGSTWYERCDVYAEKTKEL
                     RDKDEYEYLRHTLISHLWHNRDDQIVNEL"
     misc_feature    <4..375
                     /gene="LOC139840465"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggccggtt cgaacaatga cttgaatgtc cttaatgcat ctccatcgtt tgatagttta
       61 ctaactgaca cggctcctca agttccatac gaaattgggg acgttgattt tgatcgaggc
      121 tactatcttg ccgatgggat ttacccttcg tgggcttctt tcgttaaggg attctcaagt
      181 gttgttgccg caaaaaggaa atactttaca aagaaacaat ctgcagctcg taaagacgtt
      241 gagaggacat ttggaatttt gaaaggtcgt tggggtattt taagacaacc agctagggca
      301 tatagtgtaa acgcaatcaa aagaatcatg tatggttgca tcatattgca caacatgata
      361 attgaagaca atggttttaa catcgctgaa aataaatctt actacttgcc tgtcaacaac
      421 ctacaaggat caacttggta cgaaaggtgt gatgtatatg ccgagaagac aaaagagctg
      481 cgtgacaaag acgagtatga gtatcttcga catactctaa tttcgcatct atggcataat
      541 cgcgatgacc aaatagttaa cgaattgtaa
//
LOCUS       XM_071830731            1020 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840466), mRNA.
ACCESSION   XM_071830731
VERSION     XM_071830731.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1020
                     /gene="LOC139840466"
                     /note="uncharacterized LOC139840466; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840466"
     CDS             1..1020
                     /gene="LOC139840466"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686832.1"
                     /db_xref="GeneID:139840466"
                     /translation="MCLVNARTSILVNGSPTGEFTLFRGLRQGDPLSPFIFLVVMEGL
                     HLCINNKVDSSAISGVKVGKPHINIFHLFYGDDTIILSEWNRDNLANTIIVLNEFYRF
                     SGLKINVAKSHLFGIGVLDDMVDTYVHEFGCSKVSFEKVGLDIESLRAFNYALLFKWI
                     WRLKVTPNTIWANVIKAIHGEHAGMDGSILKFKGIWSNTVDTFHSLIRQGTIPHDILR
                     AKIGNGRSIRFRHDNWLGDDLLMDKYRRLYHLELSKDCSLADRVENNSWVWSWNRAYI
                     GDKNIEAIHDMISKIGQLRKIVGEGLVAGSAFLYRNLKNGKNELHGMTIGEKRWKLRN
                     GYSRS"
     misc_feature    <73..354
                     /gene="LOC139840466"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    85..87
                     /gene="LOC139840466"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgtgtcttg tgaacgcacg tacatcaatc cttgttaatg ggagccctac cggtgaattt
       61 acattatttc ggggattgag acaaggcgat ccgttaagtc cgtttatatt tttagtagtt
      121 atggaaggcc ttcacctatg cattaataac aaggtggatt caagtgcaat tagtggggtt
      181 aaagtaggta agcctcatat taatattttt cacttatttt acggagatga cacgattatt
      241 ttatctgaat ggaataggga taatcttgcg aatactatta tagttcttaa tgaattttat
      301 cgattttcgg gtttaaagat caacgtagct aaatcacatc tttttggtat tggagttcta
      361 gatgatatgg ttgatacata cgttcacgag tttggatgtt cgaaagtgtc atttgaaaaa
      421 gttggtctcg acatcgagag tttacgagca tttaattatg ctcttctttt taaatggata
      481 tggcgattaa aggtgacacc taatacgatt tgggcaaatg ttatcaaagc tatacatgga
      541 gaacatgctg gaatggatgg ctcgatcctc aaatttaaag gaatatggtc caatactgtt
      601 gatacttttc atagtctaat tcgacaaggt acaattcctc atgatatctt acgagcaaaa
      661 attggtaatg gtcgaagtat acgttttcgg catgataatt ggttgggaga tgatctttta
      721 atggacaaat atcgccggct ttaccactta gagttgagta aggattgtag ccttgcggat
      781 agagtggaga ataattcttg ggtttggtca tggaatcgtg cttatatcgg tgacaagaat
      841 attgaggcta tacatgatat gatttcaaaa attggtcagt tgcgaaagat cgttggagaa
      901 ggactcgtag ctggatcggc atttctttac cggaacttaa agaatgggaa gaatgaacta
      961 catggtatga caattggcga gaaaagatgg aaattaagga acggttattc acgatcatag
//
LOCUS       XM_071830732            1436 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840467), mRNA.
ACCESSION   XM_071830732
VERSION     XM_071830732.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1436
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1436
                     /gene="LOC139840467"
                     /note="uncharacterized LOC139840467; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840467"
     CDS             408..1436
                     /gene="LOC139840467"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686833.1"
                     /db_xref="GeneID:139840467"
                     /translation="MLDGERQHLRLNDWCHLMSDIPPVIILDSDSDSSATSTTDATDT
                     QIPLTSDPGASSSGTSSHTPVPVVTAVGAQDPPEIPAPVAPVPQEPQPRPGGVVIPAE
                     FGEGPFRNHLRMWCRRAPDGRLVPIPPGRYRQMMAARGQPVQPPVQPPPADSSSDGSS
                     TDDTSDDDSDEEDLDDAPVLPPSTPPKKRYRFDGTVIPGINGGRAFTDAHGQRCRVTD
                     PCLTRLIRSCTLWKIVMLMPMKPKLKPSVVDLAEEYDLLVYKRFDFRKSNKAELITLD
                     TASSVCEKEMLIDEAITMSNRLPEELQKLPELQINCDYECLDLNNKTHIWGVRQDKRS
                     KKKIVSKG"
ORIGIN      
        1 tttcttccta gcgtacaatt aatcaagatt catccaaatc agattacttt ttctttttct
       61 ccaattcata ttaaatccct atcataaatt catcaataaa tcttctcttc ttcaatcgga
      121 tcatcaaaaa attatctaat acagtatgaa gagtgattta agatgatgat tttcaacttg
      181 ttactaatca attagaataa ataacttcga ggatcgtcga tggtattgcg gtgtattctc
      241 gaaccctatc atcctctcct gccttttctg ccttcctctt tcaattcctt aacacaatgt
      301 tattccggaa ataaggatga atgaaggtgt ggttgattat gcacaaacca tcagatgttg
      361 agctacagtc ttcctgactg catgaactgc acctacacac atacgctatg ttagatggtg
      421 aaagacagca tctaaggtta aatgactggt gtcacttgat gtcggatatt ccacctgtca
      481 tcattttgga cagcgattca gactcgtcag ccacctcaac tactgatgct accgacacac
      541 agatcccgtt aaccagtgac cccggcgctt catcctccgg aaccagcagc catacacctg
      601 taccagtggt taccgcagtc ggcgcccagg accctccgga gattccagct ccagttgccc
      661 cggtacctca ggagccacaa ccccgccccg gtggtgttgt gattcccgcg gaattcgggg
      721 aaggtccatt ccgtaaccat ttacgcatgt ggtgccgacg cgctcctgat ggacgtcttg
      781 tgccgattcc gcccggcaga taccgacaga tgatggccgc ccgaggacag cctgttcagc
      841 cacccgtgca gccaccccca gctgattcat catccgacgg ctcatccaca gacgacacta
      901 gtgacgatga ctccgacgag gaggaccttg atgatgcacc tgtactgcca ccctccaccc
      961 cgccgaagaa gcggtaccgt ttcgatggca ccgttattcc ggggatcaac ggaggacgag
     1021 cattcactga tgcacatggc cagcgttgta gggttaccga cccgtgcctt acccggctga
     1081 tccgttcgtg cactttatgg aagatcgtga tgctgatgcc catgaaacca aaacttaaac
     1141 catcagttgt tgaccttgca gaagaatacg acttactagt gtataagagg tttgacttta
     1201 gaaagtcaaa caaggctgag ttaataactc tggacaccgc atcatctgtt tgtgaaaagg
     1261 aaatgttgat tgacgaggct attacaatgt ctaatcggct accggaagag cttcaaaaac
     1321 tacctgagct gcaaattaat tgtgactatg agtgtttgga tctaaacaac aaaactcata
     1381 tatggggtgt gaggcaagat aaaagatcaa agaaaaagat tgtttctaaa gggtga
//
LOCUS       XM_071830733             375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides toll/interleukin-1
            receptor-like protein (LOC139840468), mRNA.
ACCESSION   XM_071830733
VERSION     XM_071830733.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..375
                     /gene="LOC139840468"
                     /note="toll/interleukin-1 receptor-like protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139840468"
     CDS             1..375
                     /gene="LOC139840468"
                     /codon_start=1
                     /product="toll/interleukin-1 receptor-like protein"
                     /protein_id="XP_071686834.1"
                     /db_xref="GeneID:139840468"
                     /translation="MASSSSYSHSASSTFYHVFLSFRGGDVRKTFVDHLYSALTDRPI
                     NVYKDDKALPRGETIGPALFEAIEHSKIAVVVFSKNYADSSWCLDELSHIMRCRDENG
                     LIVMPIFYDVEPSDVRKQKRKF"
     misc_feature    46..>372
                     /gene="LOC139840468"
                     /note="TIR domain; Region: TIR; pfam01582"
                     /db_xref="CDD:396246"
ORIGIN      
        1 atggcttctt catcttcata ttctcactct gcttcttcta ccttttatca tgtatttcta
       61 agttttcgag gaggcgatgt ccgcaaaact tttgtagatc atctctactc ggctcttaca
      121 gatcgaccaa tcaacgttta caaggacgat aaagcacttc cccgcggtga aaccatcggt
      181 ccagcactct tcgaggctat cgaacattct aagattgcag tcgttgtatt ctccaaaaac
      241 tacgcagatt catcgtggtg tcttgatgaa ctttcacata ttatgaggtg tagagatgag
      301 aatgggctga ttgttatgcc catattctat gatgtggaac cctcggatgt gagaaaacaa
      361 aaaaggaagt tttga
//
LOCUS       XM_071830734            3414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TMV resistance protein
            N-like (LOC139840469), mRNA.
ACCESSION   XM_071830734
VERSION     XM_071830734.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3414
                     /gene="LOC139840469"
                     /note="TMV resistance protein N-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840469"
     CDS             141..3230
                     /gene="LOC139840469"
                     /codon_start=1
                     /product="TMV resistance protein N-like"
                     /protein_id="XP_071686835.1"
                     /db_xref="GeneID:139840469"
                     /translation="MNKAESWRKTLFDASNIAGWEPKHFADGHESELIKEIVDTVLKN
                     MSSSSSEDVDEGLVGMTDRVDELISKLKLDSSGVRMVGIWGVGGGGKTTLATSVFKKI
                     CIQFKGHCIVENIREEFKKGNMENLQNKILNNVFRANMEVPSVTQGKTMIKSMLCHSK
                     VLVVLDDVDDIRQLEALAGSHDWFGSGSRVIITTRDEHLLLKHKVDHVSHVRLLAHAE
                     ASSLFKKYAYKQRNDIKDYELLSSRVVFYAHGLPLALEVAGSFLCDKNNVEWVSYLKS
                     LENTPDAEVIDILMISYEGLKSYQKELFLDIACFFRGKLKVNAMEILDAFGYYPDIGI
                     KVLEQRSLITIVDDRFFQMHDLIQEMGHLIVRGENGNNPENHSRVWKQEDIHDMDVTM
                     ENDKIEAIYCYGHSHLCDILSKMKKLRWLTVKRVDNPHGYFFEDDDLEDVDYEWNVDG
                     NDDNVEDDNDYDDEDDNDNDDNNTNDDEDDDDDDDDDDDDDDDDKDDEDNAEHLKGPD
                     FLSNELQCIIWEDYPDNSFPDSFKATKLVVLNLYHSMQKQLWNDIDKHLPRLKVLELS
                     SAKNLLHTPNFNHLSCLQKLTLIGCDELIEIHPSLGYHKNLERIRVERCPKIKMFPEI
                     VNMKSLKILELYDCPELLEFPEIRRKMKSLEELRLQNVSIQVLPSSIEDFCTNLNKLI
                     INACGELTTIEFQLNVFKHLNTFSCTGNTMLLLQSTKTMFHQLPHSLQDLAFSYCNLN
                     DGDISSDLGQLSNLKSLVMSFNDFSKLPSPISQLTQLKVLEISNCSNLEIFPELPSSL
                     SVLKADGCPKITSIRDSLTNCKSLCDVRITNGSILTDFDRLFNSMLQEKDRGHCIWSV
                     QLKGLVEIPKTMMVRPKDIGNGKTYTLQLPEKWNNDYRGFIMYAVLPRGLLFDVKVTM
                     EQATGNSPGMDNYKDDVVQKKSVINDEMTWVGYVPFGSLRHTSWWDVTYTGQVSFEIE
                     FAYLGKQTGYAPKCTWFGVGLLKKSENGPTVVVSTGSFKFSSDSDDKYTRRIDILQD"
     misc_feature    159..>2606
                     /gene="LOC139840469"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
     misc_feature    1746..1817
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1818..1886
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1887..2027
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2028..2099
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2100..2171
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2172..2324
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2325..2399
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2400..2468
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2469..2531
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2532..2597
                     /gene="LOC139840469"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 atgaactttc acatattatg aggtgtagag atgagaatgg gctgattgtt atgcccatat
       61 tctatgatgt ggaaccctcg gatgtgagaa aacaaaaaag gaagttttga gaagcttttg
      121 caaaacaaga ggcgaacaac atgaataaag ctgaatcatg gaggaaaaca ctttttgatg
      181 caagtaacat tgctggatgg gaacctaaac actttgctga cgggcatgaa tcagaactca
      241 tcaaagagat tgttgataca gttttgaaaa atatgtcttc ctcaagttca gaagacgttg
      301 atgaaggcct tgttggaatg acggatcgtg tggacgaact aatatcaaaa ttgaaacttg
      361 attctagtgg tgtgcgaatg gttggaatat ggggtgtcgg tggtggtggt aaaactactc
      421 ttgctacttc tgtatttaag aaaatatgta tccaatttaa gggtcactgc atagttgaga
      481 acattcggga ggaattcaag aaaggcaata tggaaaattt gcaaaataaa atattaaaca
      541 acgtgtttag agcaaatatg gaagtaccca gtgttacaca aggtaaaaca atgataaaaa
      601 gtatgttatg tcatagtaaa gtgttagtgg ttcttgatga tgttgatgat ataaggcaac
      661 tggaggcgtt agccggatca catgattggt ttggtagtgg gagcagagta ataataacaa
      721 ctagagatga acatttacta cttaaacaca aggtagacca tgtttctcat gttagattgt
      781 tagcacacgc cgaagcttca tctcttttta agaaatatgc atataagcaa agaaatgata
      841 taaaagatta tgagttactt tcatcacgtg tagtttttta tgctcacggg cttccattgg
      901 cacttgaagt tgccggttcg tttctatgtg acaaaaacaa cgttgagtgg gtaagttacc
      961 tgaaatcgtt agaaaacacc ccagatgccg aagtcataga tatactcatg attagttatg
     1021 aagggcttaa aagttaccag aaagagttat tcttagatat tgcgtgtttc tttaggggaa
     1081 agttgaaagt gaatgccatg gagatacttg atgcttttgg ttattatcca gatataggga
     1141 taaaggtgtt ggaacaaaga tctctgataa ctatcgttga tgatcggttt ttccaaatgc
     1201 acgatctcat tcaagaaatg ggacacctca ttgttagagg agaaaatggt aacaatcctg
     1261 aaaatcatag cagagtttgg aagcaagaag atatccatga catggatgta acaatggaaa
     1321 atgacaagat tgaagcgata tattgttatg gtcattctca tttgtgtgat attttgtcaa
     1381 agatgaagaa actaaggtgg cttactgtga aacgagtcga taatccacat ggttattttt
     1441 ttgaagatga tgatctggag gatgttgatt atgagtggaa tgtagatgga aacgatgata
     1501 atgttgagga tgataatgat tatgatgatg aggacgacaa cgataatgat gacaacaaca
     1561 ctaatgatga tgaggatgat gatgatgatg atgatgatga tgatgatgac gacgacgacg
     1621 acaaggatga tgaagataac gctgaacatt tgaaaggacc tgattttctt tcaaatgagt
     1681 tgcagtgtat tatttgggaa gattatcctg acaattcttt cccagacagt tttaaagcaa
     1741 caaagctcgt tgttttaaat ctgtatcaca gcatgcaaaa acaactttgg aatgatatag
     1801 acaagcatct cccacgtttg aaagtgcttg aactctcttc ggcaaagaat ttactccaca
     1861 caccaaattt caaccatctc tcctgtcttc aaaagctgac actaatcggg tgtgatgagt
     1921 taatagaaat tcacccatca cttggatatc ataaaaatct tgaacgcatt cgtgtagaac
     1981 gttgtcccaa gattaaaatg tttccagaaa tcgtgaacat gaaatcactt aaaattctcg
     2041 aactttatga ctgcccagaa ttacttgagt tcccagaaat cagaagaaaa atgaaaagtt
     2101 tggaagagtt gcgtttgcaa aacgtttcga tacaagttct gccctcgtca attgaagact
     2161 tttgcaccaa ccttaataag ctaattataa atgcgtgtgg tgaattaacg acaattgaat
     2221 tccaactgaa tgtctttaaa catttgaata cgttctcctg tactggtaac actatgctgc
     2281 ttcttcaatc aaccaagaca atgttccatc agttgccaca tagcttacaa gacttggctt
     2341 tcagttactg caatttgaac gatggagaca tttcatctga tcttggtcaa ttatccaact
     2401 taaaaagtct agttatgagt tttaatgatt tttcaaagtt accttcgcca atctcacaat
     2461 tgacacagtt gaaagtcctt gaaatcagca attgtagtaa ccttgaaata tttcccgagt
     2521 taccatcaag tttatctgtt ctcaaggcag acggatgccc taagattaca tccatacgag
     2581 attctctcac aaattgtaaa tctttatgtg atgtccgaat tacgaatgga agtattctaa
     2641 ctgattttga caggttattc aattccatgc tccaggaaaa ggatagggga cattgcattt
     2701 ggtctgtcca actcaaaggc cttgttgaga ttccaaagac gatgatggta cgtcctaaag
     2761 atattggtaa tgggaaaaca tatacactgc aactaccaga gaagtggaac aatgactacc
     2821 gtggattcat aatgtatgct gttttgccac gtggcttatt gtttgatgta aaggtaacca
     2881 tggagcaggc gacgggaaat tcaccgggca tggataatta taaagatgat gtggttcaga
     2941 agaagagtgt aattaatgat gaaatgacat gggtggggta cgttccattt ggttcattga
     3001 gacacacttc atggtgggac gtaacataca ctggtcaggt ttcgtttgaa attgaatttg
     3061 catatctagg taaacaaact gggtatgctc ctaaatgcac atggtttgga gttggtctgc
     3121 tcaagaaaag tgaaaatggt cccacagtag tagtatcaac aggttctttt aagttttctt
     3181 ctgattctga tgataagtat acaagaagga tcgatatctt acaagattaa aaggatgctt
     3241 tagtttacgc aattccttca ctagactggt acgatgtgaa cgcaaattag cagaaagcct
     3301 cattttgttt ttcttttatt tatttcgtta ttatctgttg atgcaaatta tatggcatca
     3361 ttaaaaaaca gtttgtaaac aaaaaagtta gtaaactact gtatttaatt ttag
//
LOCUS       XM_071830735            3393 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RPV1-like (LOC139840470), mRNA.
ACCESSION   XM_071830735
VERSION     XM_071830735.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3393
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3393
                     /gene="LOC139840470"
                     /note="disease resistance protein RPV1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139840470"
     CDS             1..3393
                     /gene="LOC139840470"
                     /codon_start=1
                     /product="disease resistance protein RPV1-like"
                     /protein_id="XP_071686836.1"
                     /db_xref="GeneID:139840470"
                     /translation="MASSSSYSHSASSTFYHVFLSFRGGDVRKTFVDHLYSALTDRPI
                     NVYKDDKALPRGETIGPALFEAIEQSKIAVVVFSKNYADSSWCLDELSHIMRCRDENG
                     LIVMPIFYDVEPSDVRKQKRKFGEAFAKQEANNNANKADSWRKALFDASNISGWEPKH
                     FADGHESELMKEIVDKVWKKMSSSSLEDVDEGLVGMSDRIDELISILKLESSGVRIVG
                     IWGVGGGGKTTLATSVYKKICIKFNGYCIVENVREEFNKGNLEKLQNKILNVFRANME
                     VPSVTEGKTMIKHMLCHSKVLLVLDDVDDSRQLEALAGSHDWFGSGSRIIITTRDKHL
                     LHQYNVDDVSSVRLLSHKEASYLFKKYAYRVKNDIKDYEILSSRVLYYAHRLPLAVRV
                     TGSFLCDKNNVEWESYLKMLESTPDAEVMDILGISYEGLTNYEKELFLDIACFLRGKS
                     KANAMEILDAFGYYPDIGLKVLEQRALITIVNGCFQMHDLIQEMGHHIIRNEHPNNPE
                     KHSRVWKQEDIRNILSLSLQENDKIEAIYFYGQSHSFEILSKMKKLRWLTVKRADNLN
                     DGLTCYLEGDRLINIVVCCSCMQFLTDKEEDEDEDGDEEDDDERLQFIEDADDEELEF
                     YKDDTEHLKGLDFLSNELQCIIWEDYPANSFPDSSKATKLVVLTLHYTLQKQLWNDID
                     KHLPRLKVLELFIAKKLLNTPNFNHIPCLETLMLFGCDELTEIHPSLGYHEKLEYICV
                     ERCPKIRTFPEIVQMKSLKHLTIFECPEFLEFPVLLNTMPLFFHQLQDGLRELNFIDC
                     QLNDGDIPSDIGQLSNLLTLNLSFNNFSKLPSTILQLTQLKVLDLSGCSNLSKLPSTI
                     SELTQLKVFDLSECFDLERFPEFPSSLAVLMANGCFKITSIGDSIKNCKCLCDVQITT
                     YGRILTDFDRLFNYMLQGKDSGNGIWSLQLEGVIEIPNVSPKDNGKGYTLQLPEYWCY
                     YNCGFIMYASLPRSCVFDDVKITMEQVTGDSPGMDYQDDMFPGKSVDDEVTWVGYVPF
                     GSLSHTSWWDVTYTGQISFEIELVHEIKKRWYNSKCRWFGVGLIKKSENGPPELSTSS
                     FKFSSSDDKKYTRRINIIQDSKDALVYAIPSLGWYFQEHGPM"
     misc_feature    46..>2670
                     /gene="LOC139840470"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
     misc_feature    1990..2061
                     /gene="LOC139840470"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2131..2271
                     /gene="LOC139840470"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2272..2364
                     /gene="LOC139840470"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    2512..2583
                     /gene="LOC139840470"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275378"
ORIGIN      
        1 atggcttctt catcttcata ttctcactct gcttcttcta ccttttatca tgtatttcta
       61 agttttcgag gaggcgatgt ccgcaaaact tttgtagatc atctctactc ggctcttaca
      121 gatcgaccaa tcaacgttta caaggacgat aaagcacttc cacgcggtga aaccatcggt
      181 ccagcactct tcgaggcaat cgaacaatct aagattgcag tcgttgtatt ctccaaaaac
      241 tatgcagatt catcgtggtg tcttgatgaa ctttcacata ttatgaggtg cagagatgag
      301 aatgggctga ttgttatgcc catattctat gatgtcgaac cctcggatgt gagaaaacaa
      361 aaaaggaagt ttggagaagc ttttgcaaaa caagaggcga ataacaacgc caataaagct
      421 gattcatgga gaaaagcact ttttgatgct agtaacattt ctggatggga acctaaacac
      481 tttgctgatg ggcatgaatc agaactcatg aaagagatcg ttgataaagt ttggaaaaaa
      541 atgtcttctt ccagtttaga agacgttgat gaaggccttg ttggaatgag cgatcgcatc
      601 gacgaactaa tatcaatatt gaaacttgag tctagtggtg tgcgaatagt tgggatatgg
      661 ggtgtcggtg gtggtggtaa aactactctt gctacttctg tatataagaa aatatgtatc
      721 aaatttaatg gttactgcat agttgagaat gttcgtgaag aattcaacaa aggcaatttg
      781 gaaaaattgc aaaataaaat tttgaacgtg tttagagcaa atatggaagt acccagtgtt
      841 acagaaggta aaacaatgat aaaacatatg ctatgtcata gtaaagtgtt actagttctt
      901 gatgatgtcg atgattcacg ccaactggag gcattagctg gatcacatga ttggtttggt
      961 agtgggagca gaataataat aacaactaga gataaacact tgctacatca atacaatgta
     1021 gacgatgtct ctagtgttag gttattatca cacaaagaag cttcatatct ttttaaaaaa
     1081 tatgcatata gggtaaaaaa tgatataaaa gattatgaga tactttcatc acgtgtactt
     1141 tactatgctc atcggcttcc attggcagtt agagttacag gttcttttct atgtgacaaa
     1201 aacaatgttg agtgggaaag ttacctgaaa atgttggaaa gcaccccaga tgctgaagtc
     1261 atggatatac tcgggattag ttatgaaggg cttacaaatt acgagaaaga gttattctta
     1321 gatattgcat gtttccttag gggaaagtcg aaagcgaatg caatggagat acttgatgct
     1381 tttggttatt atccagatat aggactaaag gtgttggaac aaagagctct gataactatc
     1441 gtgaatggtt gtttccaaat gcacgatctg attcaagaga tgggacacca cattattaga
     1501 aatgaacatc ctaataatcc tgaaaaacat agcagagttt ggaagcaaga agatatacgt
     1561 aacattcttt ctctttcatt gcaggaaaat gacaagattg aagcgatata tttttatggt
     1621 caatctcatt catttgagat tttgtcaaag atgaagaagc taaggtggct tactgtgaaa
     1681 cgagccgata atctgaatga tgggttgact tgttacttgg agggtgatag actaataaat
     1741 attgttgttt gttgttcttg catgcaattc ctaactgaca aagaagaaga tgaagacgaa
     1801 gatggagatg aagaagatga tgatgaaaga ttgcagttta ttgaagatgc cgatgatgaa
     1861 gaattggagt tttataaaga tgacactgag catttgaaag gacttgattt tctttcaaat
     1921 gagttgcagt gtattatttg ggaagattat cctgccaatt catttccaga cagttctaaa
     1981 gcaacaaagc tcgttgtttt aacactacat tacaccttgc aaaaacaact ttggaatgat
     2041 atagataagc atctcccacg tttgaaagtg cttgaactct ttatcgcaaa gaagttactt
     2101 aacacaccaa attttaacca tatcccgtgt cttgaaacgt tgatgctctt cgggtgtgat
     2161 gagttaacag agattcaccc atcacttgga tatcatgaaa agcttgaata catatgtgta
     2221 gaacgttgtc ccaagattag aacgtttcca gaaatcgtgc agatgaaatc tcttaaacat
     2281 cttactattt ttgaatgccc ggaattcctt gagttcccag tcctccttaa cactatgcct
     2341 ttgttcttcc atcagttgca agatggctta cgagagttga atttcatcga ctgccaattg
     2401 aacgatggag acattccatc tgatattggt cagctatcca acttactaac tctaaatctg
     2461 agttttaata atttttcaaa gttaccttct accatcttac aattgacaca gctgaaagtt
     2521 cttgacctct ccggatgtag taacctttca aagttacctt ccaccatctc agaattgaca
     2581 caactgaaag tcttcgacct cagcgaatgc tttgaccttg aaagattccc cgagttccca
     2641 tcaagcttag ctgttctcat ggcaaacgga tgctttaaga ttacatcgat aggagattct
     2701 attaaaaatt gtaaatgctt atgtgacgtc caaattacta cctatggaag gattctaact
     2761 gattttgaca ggttattcaa ttacatgctc cagggaaagg atagcggaaa tggcatttgg
     2821 tctctccaac tcgaaggcgt tattgagatt ccaaatgtaa gtcctaaaga taatggaaaa
     2881 ggatatacac tgcaacttcc agagtactgg tgctattaca actgcggatt cataatgtac
     2941 gctagtttgc cacgtagctg cgtgtttgat gatgtcaaga taaccatgga gcaggtgaca
     3001 ggagattcac cgggtatgga ttatcaagat gatatgtttc cggggaagag tgttgatgat
     3061 gaagtgacat gggtggggta tgttccattt ggttcattga gtcacacttc atggtgggac
     3121 gtaacgtaca ctggtcagat ttcgtttgaa attgaattag tacatgaaat taaaaaaaga
     3181 tggtataatt ctaaatgtag atggtttgga gttggtctca tcaagaaaag tgaaaatggt
     3241 ccccccgagc tttcaacaag ttcttttaag ttttcttctt ctgatgataa aaagtataca
     3301 agaaggatca atatcataca agattcaaag gatgctttag tttacgcaat tccttcacta
     3361 ggttggtatt ttcaggaaca tggtccaatg tga
//
LOCUS       XM_071830736            1119 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840472), mRNA.
ACCESSION   XM_071830736
VERSION     XM_071830736.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1119
                     /gene="LOC139840472"
                     /note="uncharacterized LOC139840472; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840472"
     CDS             1..1119
                     /gene="LOC139840472"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686837.1"
                     /db_xref="GeneID:139840472"
                     /translation="MTILELFRIKTMWVNYTFDYACSLSRGFSGGLISVWDPNFFLIK
                     DRVWCDDNYIIVKGKWVCSNVVFFMVNVYGPNDPVKKRTLWDKLCSFIAANEGEYVCF
                     GDFNEVRDEAERFGSIFHTEEAAVFNTFIANTGLVDIPLNGRRFTWVNNTASKMSRID
                     RVLINPNVLDIFADLKLTTLPRGYSDHLPLLLQDLKLDFGPSPFKCFNSWLLYEDFDN
                     IVLSAAGEVMCNMELSFHEKMKHVKSKIRALIKDKKANEKSRKAHLMERIDEIEKVLE
                     TGNGTDHIVNERKDLVHELDNIQQVEDLDVLQKCRIKWDAEGNENSRYFHCFLKQHQN
                     DQTIKGVSINGDWIVDPILIKEAFFTFIVINLQLMMII"
     misc_feature    <124..561
                     /gene="LOC139840472"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(217..219,316..318,559..561)
                     /gene="LOC139840472"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgactattt tagagctatt tagaattaaa acgatgtggg ttaattacac tttcgactat
       61 gcttgctcgt tatctagagg tttttctgga ggcttaattt cggtatggga cccgaatttt
      121 tttttaataa aagatcgggt ttggtgtgat gataactaca ttattgtgaa aggcaagtgg
      181 gtatgttcga atgtggtatt ttttatggtg aatgtatatg gtccgaatga tccggttaaa
      241 aaacgaactt tatgggacaa gttgtgttca tttatagcag caaatgaagg agaatatgta
      301 tgttttggtg atttcaatga agttagagat gaagcggaaa gatttggttc cattttccat
      361 acggaagagg cggcggtttt taatacgttt attgccaata cgggactcgt ggatatccca
      421 ttgaatggaa ggcgttttac ttgggtgaat aatacggcat ccaaaatgag tcgtattgat
      481 cgtgtgctta ttaatcctaa cgtgcttgat atttttgcag atttaaaatt aacgacgtta
      541 cctcgtgggt actccgatca cctgccatta ttgctacaag atttaaaact tgattttggg
      601 ccatcaccat tcaagtgttt taattcttgg cttctttacg aagattttga taatatcgtt
      661 cttagtgcag cgggtgaagt tatgtgtaac atggaattat ctttccatga aaagatgaaa
      721 catgtgaaat ctaaaatcag agcgttgatc aaagataaga aagctaatga aaagtcaaga
      781 aaggcgcatc ttatggaaag aatagacgag attgaaaagg ttctggaaac aggaaatggt
      841 acagatcata ttgtcaacga aaggaaggat ctggtgcatg agctagataa tattcagcag
      901 gtggaagatc ttgatgtgtt gcaaaaatgt cgaattaaat gggatgccga aggaaatgaa
      961 aactcgagat attttcattg ttttcttaag caacatcaga acgatcaaac aatcaagggg
     1021 gtgtccatta atggggattg gattgtggat cctattctta ttaaagaagc attttttact
     1081 tttattgtga taaatttgca gctcatgatg attatataa
//
LOCUS       XM_071830738             375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 78-like (LOC139840473), mRNA.
ACCESSION   XM_071830738
VERSION     XM_071830738.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..375
                     /gene="LOC139840473"
                     /note="secreted RxLR effector protein 78-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139840473"
     CDS             1..375
                     /gene="LOC139840473"
                     /codon_start=1
                     /product="secreted RxLR effector protein 78-like"
                     /protein_id="XP_071686839.1"
                     /db_xref="GeneID:139840473"
                     /translation="MVFLDLKKAYDCVPRNLIWKTLNGRSIPSRYISVIRDMYEGAKS
                     YVRTSVGNTEVFPIEVGLHQGSALSPFLFVLILDELSRGIQEYIPWCLIFADDIVLVS
                     ESKEELNRRLEQWRVALEGNGL"
     misc_feature    <1..372
                     /gene="LOC139840473"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(13..30,190..195,280..282,286..291)
                     /gene="LOC139840473"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(13..30,190..192,286..288)
                     /gene="LOC139840473"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    193..195
                     /gene="LOC139840473"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggttttct tagacttgaa aaaggcctac gattgcgttc cacgaaactt aatttggaaa
       61 acccttaatg gtagaagtat cccgagtaga tatattagtg ttattaggga tatgtacgaa
      121 ggggcgaagt cttacgttcg aacgtcggtg ggaaataccg aagttttccc aatagaagta
      181 ggcctgcatc agggatcggc ccttagccct tttcttttcg ttttgatcct tgatgagctt
      241 tctcgtggga tacaagagta tatcccttgg tgcttgattt ttgccgatga tattgtgctt
      301 gtttccgaat ctaaggagga gctgaataga agactagaac aatggagggt ggccttagaa
      361 ggaaatggtc tataa
//
LOCUS       XM_071830739             684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840474), mRNA.
ACCESSION   XM_071830739
VERSION     XM_071830739.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139840474"
                     /note="uncharacterized LOC139840474; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840474"
     CDS             1..684
                     /gene="LOC139840474"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686840.1"
                     /db_xref="GeneID:139840474"
                     /translation="MDLVLQRRVTKSVRPIQPKILWKKLNGEKAETFKTLVVERFDAE
                     VEMVSHDDAVQMWNCLASTIREAAKEALGVAVGTSRGHRSDRESWWLSDEVQSKVALK
                     QLRFRELVTCREGTPADRTRVEESYKGVKREAKKVIARAKEKAYKDLYRKLDSKEGAN
                     DIYRIAKARERRRRDLDNIKFIKNEAGQTLVKEDEIWKRWEAYFSSLFTVGRPECHED
                     PQDSDIEQS"
ORIGIN      
        1 atggatttgg ttctccagag acgggtcacc aagagtgtaa ggcccatcca acctaaaatc
       61 ctatggaaga agttgaacgg agagaaggca gagactttta aaactttagt tgtagaaaga
      121 tttgatgcag aagtggagat ggtatctcat gatgatgcgg tccagatgtg gaattgtctg
      181 gcgtccacca ttagagaggc agccaaggaa gccttaggtg tggcagtagg aacatcgaga
      241 gggcatagat cggatagaga atcatggtgg cttagcgatg aggtccaaag caaagtcgcg
      301 cttaagcaac taaggtttag ggagctcgtc acttgtcggg aggggacccc ggcggataga
      361 actagggttg aagagagtta taaaggagtc aaaagagaag ccaaaaaggt catagcccgg
      421 gcaaaagaga aggcttataa agatttgtat aggaaactag actccaaaga aggagcaaat
      481 gatatctaca ggatagccaa agctagggag agaaggcgca gggacctaga taacatcaag
      541 tttatcaaga atgaagctgg tcaaacctta gtaaaggaag acgaaatttg gaaaagatgg
      601 gaagcgtatt tctcatctct tttcaccgtt ggaagacctg agtgtcacga agatccgcaa
      661 gactctgata tagaacaatc ctag
//
LOCUS       XM_071830740            1230 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840475), mRNA.
ACCESSION   XM_071830740
VERSION     XM_071830740.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1230
                     /gene="LOC139840475"
                     /note="uncharacterized LOC139840475; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840475"
     CDS             1..1230
                     /gene="LOC139840475"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686841.1"
                     /db_xref="GeneID:139840475"
                     /translation="MGRRSYYLKDDEGWFYKVRNSRNDLRPILNPYYKHSGAKVEKSQ
                     SSTFFVTNLPEGMDRRRLWFVCQSYGSITDSHVAFKHSKQGKRFGFIRFNDVKDEKNF
                     ARLLSTIKVDNMSLFATVARFNKESNPNPCNPRSEGSKTKTNAASKSFSGGSGDSSNP
                     KGKNSFANTVKGINPNTKVALKVNLIDQDLLQIDNPMESVLIKLKDVVTMGSIHTILI
                     EEGFEDVSVRHIGGAWLWCTFPNVDACMAFKINDMMETLYSTIKPISKNFVVEERMAW
                     VEFYGMPLCAWKETAYKKVAATVSRFMFCDHVKGTDIGMARVCIATKSSRLIDEDVSV
                     IIDGVEFRVSLRKVGSWRVKLEEDGGDNSDEETPSVPSTFDEEGKKDKIDEEDVPRLT
                     ICYFAKGILGHVRTVRH"
     misc_feature    145..339
                     /gene="LOC139840475"
                     /note="RNA recognition motif; Region: RRM; smart00360"
                     /db_xref="CDD:214636"
ORIGIN      
        1 atgggaagaa gatcatacta tctcaaggat gatgaaggtt ggttctacaa ggtgaggaat
       61 agcaggaacg atctacgacc gattctgaac ccgtattaca aacacagcgg cgctaaggtt
      121 gaaaaaagtc aatcatcgac ttttttcgtc actaatttac ctgaaggaat ggatcggaga
      181 agattgtggt tcgtatgtca atcttatggt tcaatcactg attcacacgt tgcgttcaaa
      241 cattcaaaac aaggtaaacg atttggtttc atccgattta acgatgtgaa agacgaaaag
      301 aatttcgctc gattgttatc aacaatcaag gtggataata tgtcgttatt cgccactgta
      361 gcaagattca acaaggagag taatccaaac ccttgtaacc ctagatcaga gggaagtaag
      421 acgaagacta acgctgcatc taagtcattt tctgggggta gtggtgactc ttctaatcca
      481 aagggtaaga attcttttgc aaacacagta aaaggcataa accctaatac aaaggtggcc
      541 ctaaaggtta accttattga tcaagatctt ttacagattg ataatccaat ggaatcagtg
      601 ctaattaagc tgaaggatgt tgttaccatg ggtagtattc atacgatctt gattgaggaa
      661 ggatttgaag atgtctctgt gcgtcatatt ggcggtgcat ggttgtggtg tacttttccg
      721 aatgttgatg cttgcatggc ttttaaaata aacgatatga tggaaacgtt atactcaact
      781 attaaaccga tttctaagaa ttttgtagtg gaagagagaa tggcttgggt tgaattttac
      841 ggtatgcctt tatgcgcatg gaaggagacg gcttacaaaa aagtggctgc tactgttagc
      901 cgtttcatgt tctgtgatca cgtaaaaggt acggatattg gtatggcaag ggtgtgtatt
      961 gctacgaaat ctagccgatt aattgatgaa gatgtttcgg ttatcattga tggcgttgag
     1021 tttagagtgt ctctaagaaa agtgggatca tggcgtgtca aactggaaga ggatggtggg
     1081 gacaattctg atgaggaaac tccatcagtc ccctcaacgt ttgatgaaga gggaaaaaag
     1141 gataaaattg atgaagagga tgtacccaga ttgactattt gttacttcgc aaaggggatc
     1201 ttaggacatg tgaggactgt aaggcactga
//
LOCUS       XM_071830741             597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840476), mRNA.
ACCESSION   XM_071830741
VERSION     XM_071830741.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..597
                     /gene="LOC139840476"
                     /note="uncharacterized LOC139840476; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840476"
     CDS             1..597
                     /gene="LOC139840476"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686842.1"
                     /db_xref="GeneID:139840476"
                     /translation="MANRSHKSFFMPLLCRFSINDTVKPTKFQNPTSLDPSSPKLSCT
                     GKIKKRSTNNNVENVHHRRSYSLSNSTTAKSSIHPTRYNTFQKLFSSRNLIFPAIDMN
                     TSVNNYDKCATKRSKSCNGRGGIPIINKSKYHHHMTTSNDKFDDHDFVTKVVTKELDP
                     PLPVVKCCRRDQEVSVNLWKRRGFEMKTLQIQPIRSVE"
ORIGIN      
        1 atggcaaata gatcacataa aagcttcttc atgccattat tatgcagatt ttcgataaat
       61 gataccgtta aacctaccaa gttccaaaac cccacctcac tcgatccatc gtcaccaaaa
      121 ctcagctgca ctggcaaaat caagaaaaga tccaccaaca ataacgtcga gaatgttcat
      181 catcgccgtt cctatagctt atcgaattcc acaaccgcca aatcatccat tcatccaacc
      241 cgttacaaca cgtttcaaaa actcttttcg agtagaaact tgatttttcc agctattgat
      301 atgaatacct ctgttaacaa ttatgacaag tgtgctacaa aaagaagtaa gagttgtaat
      361 ggtagaggtg ggattcctat aattaacaag agtaaatatc atcatcatat gactactagt
      421 aacgacaaat tcgatgatca tgattttgta acaaaggtgg tgaccaaaga attagaccca
      481 ccgttgcccg tggtgaaatg ttgtcgacga gatcaagaag tgagcgtaaa tctatggaag
      541 agacgtggct ttgaaatgaa aactttgcag attcaaccga ttcgatcagt cgaataa
//
LOCUS       XM_071830742            1731 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840477), mRNA.
ACCESSION   XM_071830742
VERSION     XM_071830742.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1731
                     /gene="LOC139840477"
                     /note="uncharacterized LOC139840477; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840477"
     CDS             1..1731
                     /gene="LOC139840477"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686843.1"
                     /db_xref="GeneID:139840477"
                     /translation="MADVAEFTPLNQLNNEMPHSRVHVKVFVNWKKTYFNNPHSAMAI
                     ELILIDFKSNKIRATITKNLIPFYEHTFQEGRFFNLANFGVVECDDKVMLVNHKWKIL
                     MYRTSSVVTCPSFELQHDGYQTVPFGHITEWKINTTQVFDVVGRLVEMDPLRVKREKG
                     VDTKSIEFLLMNASGTRIKCALWAHHATKLYDYVSGHNNTDLPIYVLIHNCKVRSWQG
                     CPQVSNQLWGSRVYLNEDVPPIITIKAQFDLHLEGDNNSVTPVTELKVATVTNCIVRG
                     RVQKIIAEEGWFTYTCMKCNKKVSSRHCVDTNASVYDCDTCGDVKQVYPRIRTTIRVA
                     DSSGECTLVLFDSQLSKMVKKSVAWLREKAEQSGNPYKPPTELNDILLNPFVWHVKVT
                     DFNVHYNYFGFTVESVTDDMDVFKVIDDKLNGEQGVVNDVPTTADVQIAPNQIVTDVK
                     TVIQSTEASAAVNPMEAEMKTWMKRTAYVQRLEDENKNMSNLIANANLIHKQDLIPAN
                     KTIIFPESTETESLKFGEVYKSWFNAHNDLISRLRAAMLSNETDTALSPIIKTVFDHL
                     KSFFSKKVGI"
     misc_feature    61..327
                     /gene="LOC139840477"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(61..63,229..231,235..237,241..243,322..324)
                     /gene="LOC139840477"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239926"
     misc_feature    order(76..84,133..144,148..150,169..177,181..183,226..228,
                     250..258,298..306)
                     /gene="LOC139840477"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
     misc_feature    424..744
                     /gene="LOC139840477"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(424..426,610..612,616..618,622..624,685..687)
                     /gene="LOC139840477"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(439..447,499..510,514..516,535..543,547..549,
                     607..609,634..642,661..669)
                     /gene="LOC139840477"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
     misc_feature    814..1269
                     /gene="LOC139840477"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(817..819,1150..1152,1156..1158,1162..1164,
                     1225..1227)
                     /gene="LOC139840477"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(832..834,838..843,988..999,1003..1005,1021..1029,
                     1033..1035,1147..1149,1168..1176,1207..1212)
                     /gene="LOC139840477"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggcagacg ttgctgaatt cacccctttg aaccaactca acaatgagat gccacacagt
       61 cgagttcatg tcaaggtttt tgtcaattgg aaaaagacct atttcaacaa tcctcactct
      121 gcaatggcga tcgagttgat cttgatcgac tttaagagta ataagatacg tgctacaatt
      181 accaaaaacc tgattccgtt ttacgagcac acctttcaag aaggacgttt ctttaattta
      241 gccaattttg gtgttgttga gtgtgatgac aaggtgatgc ttgtcaatca taagtggaag
      301 attcttatgt accgaacaag ctcggttgta acttgtccat catttgagct acaacatgat
      361 ggctaccaaa ctgttccttt tggtcatatt actgagtgga agatcaacac gacccaagtt
      421 tttgacgtag ttggccgtct tgtcgaaatg gacccactaa gggttaagcg cgagaaaggc
      481 gttgacacaa aatccattga gttcctgtta atgaatgcta gcggaacccg catcaaatgt
      541 gctttatggg cacaccatgc cacaaaactc tatgattatg tgtctgggca caacaacact
      601 gacttgccaa tctatgttct aattcataac tgtaaagtca ggagctggca aggctgtcca
      661 caagtgtcta atcagctatg gggttctcgt gtttacctta atgaggatgt tccaccgatc
      721 attacaatca aagctcagtt tgatcttcat cttgaaggcg ataacaatag cgtcactcct
      781 gtaactgaat tgaaggtggc aactgtgacc aactgcattg tacgtggaag agttcagaaa
      841 ataattgctg aggaaggatg gttcacttac acttgtatga aatgcaacaa aaaagtttca
      901 tcaagacatt gtgttgacac aaatgcttcg gtatatgatt gtgacacttg cggagatgtg
      961 aagcaagttt acccgagaat taggaccaca ataagagtag ctgacagttc cggcgagtgc
     1021 acgttagttt tgtttgactc gcaactatct aagatggtta agaagagtgt tgcttggtta
     1081 cgagaaaaag ctgaacaatc cggtaatcct tataagccac ccaccgagtt aaacgacata
     1141 ttgctcaatc cttttgtatg gcacgtaaag gtcactgact ttaatgttca ctataattac
     1201 tttggcttta ccgtcgaatc tgtaaccgat gatatggatg tattcaaagt cattgatgac
     1261 aagcttaatg gggagcaagg tgttgtgaat gatgtaccta caactgctga tgtacagatt
     1321 gctccaaatc agattgtgac cgatgtgaag actgtcatac aaagtactga agcttctgct
     1381 gcagtcaatc caatggaagc tgaaatgaaa acctggatga aaaggaccgc atatgttcaa
     1441 cgtttggaag atgaaaacaa aaacatgtcc aacttgattg cgaatgcaaa cttaattcac
     1501 aagcaggatt tgattccagc aaataaaact attattttcc cagagtcaac tgaaactgaa
     1561 tctctcaaat tcggtgaagt ttacaagtca tggtttaatg cacataatga tcttatttct
     1621 cgcctgcgtg ctgcaatgct tagcaatgaa acagatacag cattaagtcc tattataaag
     1681 actgtattcg atcacctaaa aagtttcttt tctaaaaaag ttggcatcta a
//
LOCUS       XM_071830743             354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TGACG-sequence-specific
            DNA-binding protein TGA-2.1-like (LOC139840478), mRNA.
ACCESSION   XM_071830743
VERSION     XM_071830743.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..354
                     /gene="LOC139840478"
                     /note="TGACG-sequence-specific DNA-binding protein
                     TGA-2.1-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139840478"
     CDS             1..354
                     /gene="LOC139840478"
                     /codon_start=1
                     /product="TGACG-sequence-specific DNA-binding protein
                     TGA-2.1-like"
                     /protein_id="XP_071686844.1"
                     /db_xref="GeneID:139840478"
                     /translation="MTPAELCLMWLGGFRPSDIVNLLIVQLELTPEQRSDESYYKNYE
                     SDAFLNRKVTSNGRNNATGTNHDLYASDRLRSDTLDKIYGRLITKQFAMALLALNDYL
                     NRITALSVLWISRPK"
     misc_feature    <1..69
                     /gene="LOC139840478"
                     /note="Seed dormancy control; Region: DOG1; pfam14144"
                     /db_xref="CDD:464092"
ORIGIN      
        1 atgacacctg cagagctgtg cttgatgtgg ttaggtggtt ttcgtccatc tgacattgtt
       61 aatctactta ttgttcaact tgaattaaca cctgaacaaa gaagtgatga gtcgtactac
      121 aagaattacg agtcagatgc atttctcaat aggaaagtta catctaatgg aagaaataat
      181 gcaacaggta ccaatcatga tctttatgct tctgatcgtt tacgctcgga tactcttgac
      241 aagatatacg gccgcctaat aaccaaacaa tttgcaatgg cattgctagc actcaacgac
      301 taccttaacc ggattactgc tttaagtgtt ttgtggattt ctcgtccaaa gtag
//
LOCUS       XM_071830744            1731 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840479), mRNA.
ACCESSION   XM_071830744
VERSION     XM_071830744.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1731
                     /gene="LOC139840479"
                     /note="uncharacterized LOC139840479; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840479"
     CDS             1..1731
                     /gene="LOC139840479"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686845.1"
                     /db_xref="GeneID:139840479"
                     /translation="MADVAEFTPLNQLNNEMPHSRVHVKVFVNWKKTYFNNPHSAMAI
                     ELILIDFKSNKIRATITKNLIPFYEHTFQEGRFFNLANFGVVECDDKVMLVNHKWKIL
                     MYRTSSVVTCPSFELQHDGYQTVPFGHITEWKINTTQVFDVVGRLVEMDPLRVKREKG
                     VDTKSIEFLLMNASGTRIKCALWAHHATKLYDYVSGHNNTDLPIYVLIHNCKVRSWQG
                     CPQVSNQLWGSRVYLNEDVPPIITIKAQFDLHLEGDNNSVTPVTELKVATVTNCIVRG
                     RVQKIIAEEGWFTYTCMKCNKKVSSRHCVDTNASVYDCDTCGDVKQVYPRIRTTIRVA
                     DSSGECTLVLFDSQLSKMVKKSVAWLREKAEQSGNPYKPPTELNDILLNPFVWHVKVT
                     DFNVHYNYFGFTVESVTDDMDVFKVIDDKLNGEQGVVNDVPTTADVQIAPNQIVTDVK
                     TVIQSTEASAAVNPMEAEMKTWMKRTAYVQRLEDENKNMSNLIANANLIHKQDLIPAN
                     KTIIFPESTETESLKFGEVYKSWFNAHNDLISRLRAAMLSNETDTALSPIIKTVFDHL
                     KSFFSKKVGI"
     misc_feature    61..327
                     /gene="LOC139840479"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(61..63,229..231,235..237,241..243,322..324)
                     /gene="LOC139840479"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239926"
     misc_feature    order(76..84,133..144,148..150,169..177,181..183,226..228,
                     250..258,298..306)
                     /gene="LOC139840479"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
     misc_feature    424..744
                     /gene="LOC139840479"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(424..426,610..612,616..618,622..624,685..687)
                     /gene="LOC139840479"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(439..447,499..510,514..516,535..543,547..549,
                     607..609,634..642,661..669)
                     /gene="LOC139840479"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
     misc_feature    814..1269
                     /gene="LOC139840479"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(817..819,1150..1152,1156..1158,1162..1164,
                     1225..1227)
                     /gene="LOC139840479"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(832..834,838..843,988..999,1003..1005,1021..1029,
                     1033..1035,1147..1149,1168..1176,1207..1212)
                     /gene="LOC139840479"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggcagacg ttgctgaatt cacccctttg aaccaactca acaatgagat gccacacagt
       61 cgagttcatg tcaaggtttt tgtcaattgg aaaaagacct atttcaacaa tcctcactct
      121 gcaatggcga tcgagttgat cttgatcgac tttaagagta ataagatacg tgctacaatt
      181 accaaaaacc tgattccgtt ttacgagcac acctttcaag aaggacgttt ctttaattta
      241 gccaattttg gtgttgttga gtgtgatgac aaggtgatgc ttgtcaatca taagtggaag
      301 attcttatgt accgaacaag ctcggttgta acttgtccat catttgagct acaacatgat
      361 ggctaccaaa ctgttccttt tggtcatatt actgagtgga agatcaacac gacccaagtt
      421 tttgacgtag ttggccgtct tgtcgaaatg gacccactaa gggttaagcg cgagaaaggc
      481 gttgacacaa aatccattga gttcctgtta atgaatgcta gcggaacccg catcaaatgt
      541 gctttatggg cacaccatgc cacaaaactc tatgattatg tgtctgggca caacaacact
      601 gacttgccaa tctatgttct aattcataac tgtaaagtca ggagctggca aggctgtcca
      661 caagtgtcta atcagctatg gggttctcgt gtttacctta atgaggatgt tccaccgatc
      721 attacaatca aagctcagtt tgatcttcat cttgaaggcg ataacaatag cgtcactcct
      781 gtaactgaat tgaaggtggc aactgtgacc aactgcattg tacgtggaag agttcagaaa
      841 ataattgctg aggaaggatg gttcacttac acttgtatga aatgcaacaa aaaagtttca
      901 tcaagacatt gtgttgacac aaatgcttcg gtatatgatt gtgacacttg cggagatgtg
      961 aagcaagttt acccgagaat taggaccaca ataagagtag ctgacagttc cggcgagtgc
     1021 acgttagttt tgtttgactc gcaactatct aagatggtta agaagagtgt tgcttggtta
     1081 cgagaaaaag ctgaacaatc cggtaatcct tataagccac ccaccgagtt aaacgacata
     1141 ttgctcaatc cttttgtatg gcacgtaaag gtcactgact ttaatgttca ctataattac
     1201 tttggcttta ccgtcgaatc tgtaaccgat gatatggatg tattcaaagt cattgatgac
     1261 aagcttaatg gggagcaagg tgttgtgaat gatgtaccta caactgctga tgtacagatt
     1321 gctccaaatc agattgtgac cgatgtgaag actgtcatac aaagtactga agcttctgct
     1381 gcagtcaatc caatggaagc tgaaatgaaa acctggatga aaaggaccgc atatgttcaa
     1441 cgtttggaag atgaaaacaa aaacatgtcc aacttgattg cgaatgcaaa cttaattcac
     1501 aagcaggatt tgattccagc aaataaaact attattttcc cagagtcaac tgaaactgaa
     1561 tctctcaaat tcggtgaagt ttacaagtca tggtttaatg cacataatga tcttatttct
     1621 cgcctgcgtg ctgcaatgct tagcaatgaa acagatacag cattaagtcc tattataaag
     1681 actgtattcg atcacctaaa aagtttcttt tctaaaaaag ttggcatcta a
//
LOCUS       XM_071830745             354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TGACG-sequence-specific
            DNA-binding protein TGA-2.1-like (LOC139840481), mRNA.
ACCESSION   XM_071830745
VERSION     XM_071830745.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..354
                     /gene="LOC139840481"
                     /note="TGACG-sequence-specific DNA-binding protein
                     TGA-2.1-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139840481"
     CDS             1..354
                     /gene="LOC139840481"
                     /codon_start=1
                     /product="TGACG-sequence-specific DNA-binding protein
                     TGA-2.1-like"
                     /protein_id="XP_071686846.1"
                     /db_xref="GeneID:139840481"
                     /translation="MTPAELCLMWLGGFRPSDIVNLLIVQLELTPEQRSDESYYKNYE
                     SDAFLNRKVTSNGRNNATGTNHDLYASDRLRSDTLDKIYGRLITKQFAMALLALNDYL
                     NRITALSVLWISRPK"
     misc_feature    <1..69
                     /gene="LOC139840481"
                     /note="Seed dormancy control; Region: DOG1; pfam14144"
                     /db_xref="CDD:464092"
ORIGIN      
        1 atgacacctg cagagctgtg cttgatgtgg ttaggtggtt ttcgtccatc tgacattgtt
       61 aatctactta ttgttcaact tgaattaaca cctgaacaaa gaagtgatga gtcgtactac
      121 aagaattacg agtcagatgc atttctcaat aggaaagtta catctaatgg aagaaataat
      181 gcaacaggta ccaatcatga tctttatgct tctgatcgtt tacgctcgga tactcttgac
      241 aagatatacg gccgcctaat aaccaaacaa tttgcaatgg cattgctagc actcaacgac
      301 taccttaacc ggattactgc tttaagtgtt ttgtggattt ctcgtccaaa gtag
//
LOCUS       XM_071830746            1962 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At1g71490-like (LOC139840482), mRNA.
ACCESSION   XM_071830746
VERSION     XM_071830746.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1962
                     /gene="LOC139840482"
                     /note="pentatricopeptide repeat-containing protein
                     At1g71490-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 49 Proteins"
                     /db_xref="GeneID:139840482"
     CDS             1..1962
                     /gene="LOC139840482"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At1g71490-like"
                     /protein_id="XP_071686847.1"
                     /db_xref="GeneID:139840482"
                     /translation="MLISLLNSLKQSTTQNDLSKAFNTFSLILQQYSQNPSTSHYILQ
                     SLASLISCCSLLKSTSQGKQLHAYIITFGFEKSPVLVPKLVTFYSGSNLLRDAYYVTL
                     NLNILHPLPWNVVISSYIRAGFRKDGLFVYQKMVKQGIVPDIFTYPSVLKACGEEFDL
                     GFGKAVHNLIVQSGLGWNLFMYNALVFMYGKCGDLKSARKLFDEMPERDCVSWNSIIS
                     GYASKGMWREAFELFDRMQDENVDANMIIWNTVVGGYLKTGDYMRVIKMISQLRTYGD
                     EWDHVAVINGLNACSHIGALRSGREIHGLAIRTCCYAYDNVKNALITMYSRCMDVKHA
                     YIAFNLIGDKSVITWNSIITGFAHLDNAEEATYLFREMLLSKVEPSYVTIASILPLCA
                     RVANLQHGKEFHCYVIKHEEFQNYLLLFNSLIDMYARSGKILLARRLFNSLTKKDEVT
                     YTAMIAGYGIQGDGRMAVDLFDEMIRSNIMPDHVTMVAVLSACSHSALVDQGQTLFNK
                     MRDEYGIVARLEHYACMVDLYGRAGLLDKAEETIRTMPYKPTPAMWATVIGGCRIHGH
                     EELGKFAGEKLLEMRPRSSGYYVLVANMYAEFGWWEKLAEVRVLMRELGVNKVPGCAW
                     LDVGDGFTEFSVADTKNVKAVEIYDMLDG"
     misc_feature    142..1959
                     /gene="LOC139840482"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    334..414
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    541..624
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    628..717
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    733..816
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    955..1032
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1042..1125
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1141..1338
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1348..1431
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1447..1539
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1555..1644
                     /gene="LOC139840482"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgttaattt ctctactaaa ctctctcaaa caatcaacaa ctcaaaacga tttatcaaaa
       61 gcattcaaca ctttttcatt aatcttacaa caatattccc aaaatccatc gacatcacat
      121 tacatattac aatcattagc ttcacttatt tcatgttgtt cactacttaa atcaacttca
      181 caaggaaagc aattacacgc ttatataatt actttcggtt tcgaaaaatc ccctgttttg
      241 gtcccaaaat tggtcacgtt ttactctggt tcaaatctat tgcgtgatgc gtattatgtc
      301 actctaaatt tgaatatatt gcatccttta ccatggaatg tagttatctc tagttatatt
      361 agagctgggt ttcgaaaaga tggtttattc gtgtatcaaa aaatggtgaa acaggggatt
      421 gtaccggata tatttacgta tccctctgtt cttaaagcat gcggcgaaga atttgatttg
      481 gggtttggga aggctgttca taatttgatt gttcagtcgg gtttggggtg gaatttgttc
      541 atgtataatg cattggtgtt tatgtatgga aaatgtggcg acttgaaatc tgcacgtaaa
      601 ctgtttgatg aaatgcctga gagagattgt gtttcttgga attcaattat ttcagggtat
      661 gctagcaaag gcatgtggag ggaagctttt gagctttttg atcgtatgca ggatgaaaat
      721 gtcgatgcaa atatgataat ttggaatacc gttgttggag ggtacttgaa gacaggtgac
      781 tatatgcgag tgataaagat gatttcccag ctgaggactt atggtgatga atgggatcac
      841 gtggctgtaa tcaacggttt aaatgcgtgt tctcatattg gtgcgttaag atctggaaga
      901 gaaattcatg gtttggctat tcggacgtgt tgctatgctt acgataatgt gaaaaatgca
      961 ttgattacga tgtattcaag gtgtatggat gttaagcatg cttatattgc gtttaattta
     1021 attggagata aaagtgtgat tacatggaat tcaataataa caggctttgc acatttggac
     1081 aatgcagaag aagccacata tctttttcgg gaaatgttgc tttctaaagt tgaacccagt
     1141 tacgtgacga tagcaagcat acttcctttg tgtgcccgag tggcaaatct tcaacacggt
     1201 aaagagttcc attgttatgt tataaagcac gaagaatttc aaaattactt attgctattt
     1261 aactcactta tcgacatgta tgcaagatct gggaaaatct tgttagcgag aagattgttt
     1321 aatagtttga ccaaaaaaga tgaagtcaca tacactgcaa tgatagcagg ttacgggatc
     1381 caaggagatg gacggatggc ggttgacttg tttgacgaga tgattaggtc aaacataatg
     1441 ccggaccatg tgaccatggt tgcggttttg tcagcttgta gtcattctgc acttgttgac
     1501 caaggtcaaa ctttgtttaa caagatgcgt gatgaatacg ggatagttgc tcgtttagag
     1561 cattatgcat gcatggttga tttatatggg agagctggtt tattggataa agcagaagaa
     1621 acaatcagaa caatgcctta taaaccgaca cctgcaatgt gggccacggt tattggaggg
     1681 tgtcggatcc atggacacga agagttggga aaatttgccg gtgagaaact gttggaaatg
     1741 aggcctcgga gttcgggata ttatgtattg gtggcaaaca tgtatgctga atttgggtgg
     1801 tgggagaaac tagctgaagt tagggttttg atgagggaat tgggtgtgaa taaggttcct
     1861 ggttgtgcat ggttagatgt aggagatggg tttactgagt tttcggttgc agatacgaag
     1921 aacgtgaagg cagttgagat ttatgatatg ctggatggat ga
//
LOCUS       XM_071830749            1287 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides branched-chain-amino-acid
            aminotransferase-like protein 2 (LOC139840483), mRNA.
ACCESSION   XM_071830749
VERSION     XM_071830749.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1287
                     /gene="LOC139840483"
                     /note="branched-chain-amino-acid aminotransferase-like
                     protein 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840483"
     CDS             142..1287
                     /gene="LOC139840483"
                     /codon_start=1
                     /product="branched-chain-amino-acid aminotransferase-like
                     protein 2"
                     /protein_id="XP_071686850.1"
                     /db_xref="GeneID:139840483"
                     /translation="MAEEIETEVIHSWSSPRSLSTSLMYSFAQRDDTEVLDEPLYAHY
                     VKVTGVDRPYKEELLSKMECDGNKVVNNIIYGPGVKKYRFCKHIAKNRLPGLSDALTK
                     KGKHFILIRNPLDMLQSFDKVLPSSFNELGLADLVSVYSELCAAGKPPHIIDAAQLQQ
                     EPEAALRCLCEDLDIPFQNSMLKWEAGPNSVDGLWAPWWYKSVHKSTGFAQTVKYRPP
                     FPQSLYDMLEQSLPFYNLLKSRARRTRFNKIPTPSLPVSSNEKILVWVGDDMLPRDSA
                     MVSVFDSVVQGGDSVWEGLRIYNGKVFKLEEHLDRLFDSAKALAFNNVPTREEVKEAI
                     FKTLIRNGMFDNAHIRLSLTRGKKVTSGMSPGFNLYGCTLIGTYFRK"
     misc_feature    169..864
                     /gene="LOC139840483"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_5;
                     pfam19798"
                     /db_xref="CDD:437630"
     misc_feature    934..>1236
                     /gene="LOC139840483"
                     /note="PyridoxaL 5'-Phosphate Dependent Enzymes class IV
                     (PLPDE_IV). This D-amino acid superfamily, one of five
                     classes of PLPDE, consists of branched-chain amino acid
                     aminotransferases (BCAT), D-amino acid transferases
                     (DAAT), and 4-amino-4-deoxychorismate...; Region:
                     PLPDE_IV; cl00224"
                     /db_xref="CDD:444764"
ORIGIN      
        1 gaaacattac tgacacaaat ttatatacac acggcagctg tctatctaac tcagggtctt
       61 ctcttcaaat tgatcatatt atacatatac atacatgcat aaaagatctt gattctgatt
      121 tagcgaatct ggacattaaa aatggcagaa gagattgaaa cagaggtgat tcattcatgg
      181 tcttctccta gatctttaag cactagtctt atgtactctt ttgctcagag ggatgataca
      241 gaagtgcttg atgaacctct gtacgcccac tatgtaaagg taacaggggt tgataggcca
      301 tataaagaag aactactttc taaaatggag tgtgatggaa ataaggtcgt gaacaacatt
      361 atttatggtc cgggagtaaa gaaatatcgg ttttgtaagc atatagcgaa aaaccgcctg
      421 cctggtttaa gtgatgcatt aacaaagaaa ggaaagcact ttatattaat tcgaaatccg
      481 cttgatatgt tgcaatcgtt tgacaaggtt ttgccatcat cattcaatga actcggattg
      541 gcagacctgg tttctgttta cagcgaactt tgtgcagcag ggaagccccc tcatattatc
      601 gatgctgctc aacttcaaca agaacccgag gctgctttac gttgtctttg tgaagatctt
      661 gacattccat ttcagaattc gatgctaaaa tgggaagctg gcccaaattc tgttgacggt
      721 ctttgggctc catggtggta caagagtgta cacaaatcaa ctggttttgc acaaactgta
      781 aaatatcgtc cgcctttccc acagtcgctt tatgacatgt tggagcaaag tttacccttt
      841 tataacttgc ttaagagtcg tgcaagacgt acaagattta ataagattcc aacgccatct
      901 cttccggttt cttccaatga aaagattctt gtatgggttg gtgatgatat gttaccccgt
      961 gatagtgcaa tggtttcagt atttgactca gttgtacaag gtggtgactc agtttgggaa
     1021 ggacttagaa tttataacgg aaaagtgttt aagcttgaag agcatttaga caggttgttt
     1081 gactctgcaa aggctctagc tttcaacaat gtaccaactc gtgaagaggt taaggaggcg
     1141 atattcaaga cactgattag gaatgggatg tttgacaatg cacacattcg tttaagtctg
     1201 acacgtggca aaaaagttac ttcagggatg agcccgggtt tcaatcttta cggatgcacc
     1261 ttaataggta cgtactttag aaagtag
//
LOCUS       XM_071830750            1218 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840484), mRNA.
ACCESSION   XM_071830750
VERSION     XM_071830750.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1218
                     /gene="LOC139840484"
                     /note="uncharacterized LOC139840484; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840484"
     CDS             1..1218
                     /gene="LOC139840484"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686851.1"
                     /db_xref="GeneID:139840484"
                     /translation="MSSSCTSIDCKVLAWKKAIGSQIVFLRYDPIRFFLFVVARMCRT
                     PSAVLNRKSPYELIYKTDPNLSHLNCFGCLCYAIDLNPSNKFSSRSIKCVLVGFSTVK
                     KVKHKDVLSVSSEKLFQTNDLSQSNFFDDIFEISVNTLSPNDEGRAAEHGNGSSDDNH
                     EDDHCPTATHHEDNTFIPEGNTNSNDSFENINLRRSSRSTIFLRNLMILLLMEKSNME
                     LKELLITVFRIKYKANEEIERYKARLVAKGYSKKEHIDYEETFSPIVKHVTVRCFITL
                     AVQNNWPLYQLDINNAFLYGDLKEEIYMTIPEGYYTEAANTNKVCKLTKSLYGLKQSP
                     RQWNEKLNAALVESGFVQSKSDYSLYVKNSDDFFIALLVYVDDIVITGNSEVEIKKNQ
                     SFSANKVYDKRFG"
     misc_feature    676..>1167
                     /gene="LOC139840484"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgagctctt cttgtacttc aattgattgc aaggttcttg cttggaagaa ggccattggc
       61 agccagattg tcttcttgag atatgatcct atccgatttt tcttatttgt tgttgcaaga
      121 atgtgcagga ctccctctgc tgtgctaaat agaaaatctc cttatgaatt gatttataaa
      181 actgatccta atctctccca tcttaattgt tttggatgtc tttgttatgc aattgattta
      241 aatccttcaa acaagttttc aagtagatca ataaagtgtg ttttagttgg tttttctact
      301 gttaaaaaag ttaaacataa agatgtttta tctgtttctt ctgaaaaact ttttcaaaca
      361 aatgatttaa gtcaatcaaa tttttttgat gatatttttg aaatttctgt aaacacttta
      421 agtcccaatg atgaagggag agctgctgaa catggtaatg gcagtagtga tgataatcat
      481 gaagatgatc attgtcctac agcaacacat catgaagata atacatttat ccctgagggc
      541 aataccaatt ctaatgattc ttttgaaaat attaatttaa ggagatcttc tagaagcact
      601 attttcctaa gaaatttgat gattttgttg ttgatggaaa agtcaaatat ggaattgaaa
      661 gagttgttaa ttacagtttt cagaatcaaa tacaaagcta atgaagaaat tgaaagatac
      721 aaagctagac ttgttgctaa aggttacagt aaaaaagaac atattgatta tgaagaaacc
      781 tttagtccta ttgtaaagca tgttactgtt agatgtttca ttactttggc tgttcaaaat
      841 aattggccat tatatcaact tgacatcaat aatgcttttt tatatggaga tttaaaagaa
      901 gagatttata tgactattcc tgaaggatat tatactgaag ctgccaacac taataaagtg
      961 tgtaaattaa ctaaatcctt atatggccta aaacagtctc caagacaatg gaatgaaaaa
     1021 cttaatgctg ctcttgttga aagtggtttt gttcaaagca agtctgacta ttctttgtat
     1081 gttaaaaatt ctgatgattt tttcatagct ttgttagttt atgttgatga tattgttatt
     1141 acaggaaata gtgaagttga gataaaaaaa aatcaaagct tttctgcaaa caaagtttat
     1201 gataaaagat ttgggtaa
//
LOCUS       XM_071830751             957 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840485), mRNA.
ACCESSION   XM_071830751
VERSION     XM_071830751.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..957
                     /gene="LOC139840485"
                     /note="uncharacterized LOC139840485; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840485"
     CDS             1..957
                     /gene="LOC139840485"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686852.1"
                     /db_xref="GeneID:139840485"
                     /translation="MKNTWHVDVYYAKAWNARCIVIERLFETWESNFIQLANYLNELV
                     STNPDTIVVFENGPEIEEGFETFKFVFWAFGPAIKAYKRPMPIICIDGTHLKVDEEIN
                     ESWVWFLKMLQENVVGNGKLCVISDRNPGILHAMGAQTYGWEHRYCLCHIRSNLLSKY
                     TKVKLLKHLCCTVGSTTNQILYKNSLRAIKQASIEAWKYLHDADLGKWTVYRDNERSR
                     WGNTTTNIAESLNNGLRHARMMPIKACIEYTFDYPRQNFYNQSRDARQCNSPLSKNMF
                     NIFNERTKELKDTNQHVITNNKVCSRFNQLIKEVVKVAPITL"
     misc_feature    259..465
                     /gene="LOC139840485"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgaaaaata catggcatgt ggatgtctat tacgctaaag catggaatgc taggtgtatt
       61 gtaatcgaac gattgtttga aacttgggaa agtaatttta ttcaactagc aaattattta
      121 aatgaattag tttctaccaa tccagacaca attgttgtgt ttgaaaatgg acctgaaatt
      181 gaagaaggtt tcgaaacatt caaatttgtg ttttgggcat tcggtccagc tattaaagca
      241 tataaaaggc ctatgccgat catttgcatc gatggcaccc atttgaaagt tgatgaagaa
      301 attaatgaaa gttgggtttg gtttttgaaa atgctccaag aaaatgttgt tggaaacgga
      361 aagttgtgtg tcatctctga tcgaaaccca ggtatcctac atgcaatggg tgctcaaacg
      421 tacggttggg aacataggta ttgtttgtgc cacattcgta gcaacttatt gagcaaatat
      481 actaaagtaa aattgctcaa acacttatgt tgtacagtcg gttcaacaac caatcaaata
      541 ctctacaaga attccctcag agccatcaaa caagctagta tagaggcttg gaaatatttg
      601 catgatgctg atttaggcaa gtggactgtg tatagggaca acgagaggag tcgttggggt
      661 aacacaacga caaatattgc tgagtccctc aacaatgggt tacgtcatgc ccgtatgatg
      721 cccatcaaag cgtgtattga atatacattt gattacccca gacaaaactt ctacaatcaa
      781 agtcgagatg caaggcaatg taattcacca ctgtccaaga acatgtttaa catctttaac
      841 gaacggacaa aagagctcaa agatacaaac caacatgtta taacgaacaa caaggtatgt
      901 tcaaggttca atcaacttat caaagaagtg gtgaaggtgg caccgattac actgtag
//
LOCUS       XM_071830752             657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides monooxygenase 1-like
            (LOC139840486), mRNA.
ACCESSION   XM_071830752
VERSION     XM_071830752.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..657
                     /gene="LOC139840486"
                     /note="monooxygenase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840486"
     CDS             1..657
                     /gene="LOC139840486"
                     /codon_start=1
                     /product="monooxygenase 1-like"
                     /protein_id="XP_071686853.1"
                     /db_xref="GeneID:139840486"
                     /translation="MVIIGAGICGLATAVALNKKGIKSVVMEKSESLRNVTGAAIGIR
                     QNGWRALDQLGVADILRPTAISLQRERMVLLKEGKQQQSSMIGETRCLRRKDLLNTLY
                     DALPPDTVKFGCQLKSIKLNLTTNKPVLRFINGRSIIAKVVIGCEGGRSIVAEYLNVK
                     PTKMFPSCNVRGITNCPNGHSFDAEFVRFRSDNNLVGRIPIDDKSVYWFCGHPYIPGG
                     "
     misc_feature    4..>486
                     /gene="LOC139840486"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion]; Region:
                     UbiH; COG0654"
                     /db_xref="CDD:440419"
ORIGIN      
        1 atggtgataa ttggggcagg tatttgcggg ctagcgacag ctgtggcact taataaaaaa
       61 ggaataaaaa gtgtagtaat ggagaaatca gagagtctga gaaacgtcac cggagccgca
      121 atcggaatcc gccaaaatgg ttggcgagct ctcgatcagc ttggcgttgc cgacatcctc
      181 cgccctactg ctatttctct tcagagggaa cgaatggtat tactcaagga ggggaaacaa
      241 cagcagagtt caatgattgg cgaaactcgt tgcttaagaa gaaaggactt attaaacact
      301 ctgtatgatg cccttcctcc agatacagta aagttcggtt gccaacttaa atcaataaaa
      361 ttgaacctga ctactaacaa accagttctt cggttcatca atggaaggtc tatcattgcc
      421 aaggttgtga ttggatgtga aggaggcagg tcgattgttg ccgaatatct taacgtcaag
      481 cctacaaaga tgtttccgtc atgtaatgtt agaggcataa caaactgccc aaatggtcat
      541 tcattcgacg ccgaattcgt tcgtttcaga agtgacaaca atcttgtagg aagaataccg
      601 attgatgata aatcggttta ctggttttgt ggccatccct atattcctgg aggctag
//
LOCUS       XM_071830753            1308 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840487), mRNA.
ACCESSION   XM_071830753
VERSION     XM_071830753.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1308
                     /gene="LOC139840487"
                     /note="uncharacterized LOC139840487; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840487"
     CDS             1..1308
                     /gene="LOC139840487"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686854.1"
                     /db_xref="GeneID:139840487"
                     /translation="MPIKQVLTKPKISGRLALWAVELGDYEISYLPRNAIKGQGLADY
                     LAEMSGELEVINERTELKPVQGETWDLFTDGASCVEGASVGLVLANPSGEEHTYALRF
                     NFDVTNNEAEYEALLASLNIAHKMNVTKLRAFTDSQFVANQFSCSFDAHDPSMQRYLK
                     LLQEPAVRFEHFELAQVPRSQNKKADALSKLAALTFSHFQKQVWVEELPSKSIDNDLM
                     VASVEEEHPNWMEPILQYIRNNVLSNDKREARLVRERAPMYIIQNDILYCKSYCGLMM
                     LCVGPIEGEMIVDEVHNGSCALHSGYKTIAAKIMWMGYFWLSLYRDVAKIVKRCKICQ
                     RHAPQNRIPKHDMIPVNSPWPFHKSAIDIVGPFPAGPGNVKFLIMAIDYFTKWVEAKA
                     VRTLTRVQVLQKFTSVAHPQANGLCEVTNRDNVSGIKKRLYEK"
     misc_feature    205..579
                     /gene="LOC139840487"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(220..231,319..327,334..336,406..408,526..528,
                     568..570)
                     /gene="LOC139840487"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    853..1017
                     /gene="LOC139840487"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgccaatca agcaagtttt aacaaagccg aaaatatctg gtaggcttgc attatgggca
       61 gtggagttag gcgattatga aatctcttac cttccgcgca atgctataaa gggacaaggt
      121 ttggcggact atcttgcaga aatgtctggt gagttggagg taattaatga gcgaacagag
      181 ttaaagccag tacagggcga gacatgggat ttatttactg acggagcctc atgtgtagaa
      241 ggtgccagtg tgggtttagt gttagcaaac ccaagtggtg aagagcatac atacgcgcta
      301 cgtttcaatt ttgatgtaac aaataatgaa gctgaatacg aagcattgct tgcgagttta
      361 aatatcgcgc ataaaatgaa tgtcaccaag ttgcgcgctt ttacagattc gcagtttgtg
      421 gcaaatcagt ttagctgctc ttttgacgca catgacccct caatgcaaag atacttaaag
      481 ttattgcaag agccagctgt gcgatttgag cattttgaac ttgcacaagt accaaggagt
      541 caaaacaaga aggcagatgc gttaagtaaa ctggctgctt taacattttc acactttcaa
      601 aagcaagttt gggtagagga attgccaagc aaatccattg acaatgattt aatggttgcg
      661 tctgttgaag aagaacatcc aaattggatg gaaccaattc tgcagtatat acgcaataat
      721 gttttgtcaa atgataaacg cgaagcccgt ttagttcgtg agcgagcacc aatgtacatc
      781 attcaaaatg atattttata ttgtaagtca tattgcggcc taatgatgct gtgtgttggc
      841 ccaattgaag gcgagatgat agtggatgaa gtacacaacg gttcttgcgc attacattca
      901 ggttataaaa ctattgcggc caaaattatg tggatgggtt acttttggct atctttgtat
      961 cgcgatgttg caaagattgt taagcgttgc aagatttgcc aacggcatgc gccgcagaat
     1021 agaattccga agcatgatat gatccctgtc aattcgccat ggccatttca taagtcggct
     1081 attgacattg taggaccatt tcctgcaggt cctggcaatg tcaaattcct aattatggca
     1141 attgactatt ttacaaaatg ggttgaggct aaggcggttc gcactctcac tagagtgcaa
     1201 gtgcttcaaa agtttacgtc agtggcacat ccacaggcta atggcttgtg tgaagtgaca
     1261 aaccgcgaca atgtgagcgg tattaaaaag cggttgtatg aaaagtga
//
LOCUS       XM_071830754             834 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840488), mRNA.
ACCESSION   XM_071830754
VERSION     XM_071830754.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..834
                     /gene="LOC139840488"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139840488"
     CDS             1..834
                     /gene="LOC139840488"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686855.1"
                     /db_xref="GeneID:139840488"
                     /translation="MLFLNGHLNETVHMEQPPGFIDSKYPTHVCKLNRALYGLKQAPC
                     AWFQRLSTFLIQQRFTCSHADPSLFVFKRNNCLLYLLVYVDDIILTGNHSATIKRFIS
                     RLHQEFAIKDLGCLSYFLGLEVTYTTTGLFLSQTKYAHDILTRAKLLDAKPSGIPFAT
                     AELFTSTGTKFADPTQYRSLVGALRYLTITRPDISYAVNQVSQFLQSPTMDHFQAVKR
                     ILRYVKGTITYGLSFLHSTKPTFLGYSDADWARCIETRRSTYGYSIFLGGNLVSWSAK
                     K"
     misc_feature    <7..471
                     /gene="LOC139840488"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    727..>831
                     /gene="LOC139840488"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgctttttc tcaatggcca tttaaatgaa accgttcaca tggaacaacc tcccggtttt
       61 atagattcaa aatatccaac acatgtgtgc aagttaaacc gcgctttata tggtcttaaa
      121 caagctccct gtgcttggtt tcaacgtctt agcacgtttc ttattcagca aaggtttact
      181 tgtagtcatg ccgatccttc attatttgtc ttcaaacgca acaattgctt actttatctc
      241 cttgtttacg tggacgatat tattctcacg ggaaatcact cggctacaat caaacggttt
      301 atttctcgtc tccatcaaga atttgctatt aaagatcttg gttgtttgag ttattttttg
      361 ggacttgaag taacatatac cactactggt ttgtttctca gtcagactaa gtatgcacat
      421 gatatattga cacgtgcgaa attgttagat gcaaaaccga gtggaatacc ttttgctact
      481 gccgagttgt ttacttctac gggtaccaag tttgcggatc ctactcaata tcgttcgctg
      541 gttggcgctc ttcgatatct taccatcacc cgaccagata tttcttatgc cgtgaatcaa
      601 gtcagtcaat tcctacagtc tcctactatg gatcattttc aagctgtcaa gaggattttg
      661 cgctatgtta agggcactat tacttatggc ttatcttttc ttcattcgac caagcctact
      721 tttcttggtt attctgatgc agattgggct cgttgcattg agactcgccg ctcgacatat
      781 ggatactcaa tatttcttgg tggcaattta gtttcttgga gtgccaagaa ataa
//
LOCUS       XM_071830755             633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840489), mRNA.
ACCESSION   XM_071830755
VERSION     XM_071830755.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..633
                     /gene="LOC139840489"
                     /note="uncharacterized LOC139840489; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840489"
     CDS             127..633
                     /gene="LOC139840489"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686856.1"
                     /db_xref="GeneID:139840489"
                     /translation="MRMKKVLTAEEIAGISFRKQDVDKQLEQAAASEHVEESPAESGN
                     KRKAAGTSEAQKKKKKTPKQLEDMRNDNFVAIEPRSADLPPPINEHVEETQPTTPRVN
                     PELQATATSKDKAIPVESESTLPPPQGSFRVANLRQLCQSSAENAAEQSAFLQQIFPA
                     ETGPGSNV"
     misc_feature    <433..621
                     /gene="LOC139840489"
                     /note="N-terminal domain of TRF-interacting nuclear factor
                     2; shelterin complex protein of telomeres; Region: TIN2_N;
                     cl18929"
                     /db_xref="CDD:473127"
ORIGIN      
        1 tattggcctt gggaggatgt gcggccggcc atagttggcc ccgatggaaa gggtaggaat
       61 agcataaacg cgtacttaca taaatttttg tatattttct aacgcaggcg tttattgttt
      121 gcagagatga ggatgaagaa ggtgcttacc gcggaggaga ttgctgggat ctctttccgc
      181 aagcaggatg tggacaaaca gctagagcag gcagctgcta gcgaacatgt ggaggaatcg
      241 ccggcggagt caggcaataa acgcaaggcg gctgggacgt ccgaggctca gaagaagaag
      301 aagaagactc ctaagcagct ggaggatatg cgcaacgaca attttgttgc catcgagccg
      361 cggtccgcag acctacctcc ccccattaat gagcatgtgg aggagacgca gccaacaaca
      421 ccgcgggtca accccgagct gcaggccact gccacatcca aagacaaggc gatccccgtc
      481 gagtctgagt ctacattacc tcctccgcaa ggcagcttcc gtgttgccaa cctccgccaa
      541 ctttgccagt cctccgcaga aaatgctgcg gagcaatctg cattcttgca gcaaatcttc
      601 ccagcagaga ccggccctgg aagcaatgtc tga
//
LOCUS       XM_071830756            2132 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            EXO70I-like (LOC139840491), mRNA.
ACCESSION   XM_071830756
VERSION     XM_071830756.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2132
                     /gene="LOC139840491"
                     /note="exocyst complex component EXO70I-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139840491"
     CDS             9..2132
                     /gene="LOC139840491"
                     /codon_start=1
                     /product="exocyst complex component EXO70I-like"
                     /protein_id="XP_071686857.1"
                     /db_xref="GeneID:139840491"
                     /translation="MEDFPILTKLESACSELKIVLDSSTNLQTNLQKFDDNYTSLQES
                     LNAASRRLAPIQSLSIASKSLETRINRAVSPALVLIDGFRISESLQRKLVDISTKLPD
                     QKSQNRRLRLLIKYVDCVDKLNIAINLISQEGGLAIQRLQEVVEFLSRTKATDQFRTQ
                     RLRETLVTLKALYETEVDSMKFDGLLDEALLNLQDEFEGILLQLRHHNIGVHGDDGGD
                     VAEVAELGTEMEVEVLRRISETLTANDCLDICIDIFVKVRYKRAAKALMRLNPDYLRT
                     YKPEEIDEMEWESLETSISLWIQHFELAVRTVFVSEKNLCNHVLTNIMDGMIWQECFV
                     KIADKIMAVFFRFGEGVARSNKEPQKLFKLLDMFSSLENLKIEFSDIFEGEPGADICS
                     RFRELEKLLIHASTKVYWEFGLQIEGNQDGLPSPQDGSVPKLVRYAINYLKYLTSDNY
                     SAPMAQVLRTEHIWKAGILSAPETDKDLLKEAVSNVMEALHRNIESKKSGYKDKVLYH
                     VFTMNTYWYIYMRTKNTELSKLLGESYMRKNYKVVAEEAAYLYEKQAWGPLVRLLDKE
                     DMVDVNDEGIESVAKGKIEAFLKGFEEIAQRHTSKYIIPEPDLREQIKEATVKLIVPV
                     YSEFLDEFSSLLTVKSYSPPESIEELLGQIFLGNGRNSSMGSRRREIKDQAEGRNSVS
                     SDIEPMPRRSSVSRFQRNRSNTSDA"
     misc_feature    897..1967
                     /gene="LOC139840491"
                     /note="Exo70 exocyst complex subunit; Region: Exo70;
                     pfam03081"
                     /db_xref="CDD:460798"
ORIGIN      
        1 cacaaaatat ggaagatttc ccaattctga ccaagctaga atcagcatgt tctgaactca
       61 aaatcgtttt agattcgtca acaaacttgc aaacaaacct tcaaaaattc gacgataact
      121 atacttctct acaagaaagt ctaaatgcag cttcaagaag attagcgcct attcaatcgc
      181 tttccattgc ctcaaaatca cttgaaacac ggatcaaccg ggcggtttca ccagcgctag
      241 tactcattga cgggttcagg atatctgaat ctttgcagcg aaaacttgtc gacatttcaa
      301 caaaacttcc tgaccaaaag tctcaaaaca ggagactaag gttactaatc aagtatgttg
      361 attgtgttga taagttgaat atagcgatta atttgattag tcaagagggt gggcttgcga
      421 ttcaacggct gcaagaggtg gtggagtttt tgagtaggac taaagctact gatcaattta
      481 gaactcaacg gttaagagag acgttggtca ctttaaaggc gttgtatgaa acggaagttg
      541 attctatgaa gtttgacggg ttactagacg aggctttatt aaacttacaa gatgagtttg
      601 aagggatttt gctgcagctg aggcatcata atattggagt gcacggtgat gacggtggtg
      661 atgtggcgga agttgcagag ttggggacgg agatggaggt tgaagtactt agacggatat
      721 cggaaacgct tacggctaat gattgcttgg atatatgcat cgacatcttc gtcaaggtaa
      781 ggtataagag agcagcaaaa gcactaatga gactaaaccc agattaccta agaacctaca
      841 aacccgaaga aatcgatgag atggaatggg aaagtttaga gacttccata agcctatgga
      901 tccagcactt cgaactagca gtccgaaccg ttttcgtttc tgaaaagaat ctatgcaacc
      961 acgtacttac aaacatcatg gacggtatga tctggcaaga atgcttcgtt aaaatagccg
     1021 acaaaatcat ggcagtattc ttccggttcg gggaaggtgt tgcccgaagt aataaagagc
     1081 cacaaaagct ctttaagtta ttagacatgt ttagttcttt agaaaatctg aaaatcgagt
     1141 tttccgacat ttttgaaggg gagccaggag ctgatatatg ttctcggttt cgggaattag
     1201 aaaagcttct cattcatgct tcgactaaag tttattggga atttgggctt cagattgaag
     1261 gtaaccaaga tgggttgcct tcaccacaag atgggtcggt tccaaaatta gtccgatacg
     1321 ccattaacta cctgaaatac ctaacttctg ataattacag tgcacccatg gctcaggtac
     1381 tcagaaccga acacatatgg aaggcgggaa ttttatcagc acccgagacc gataaagatt
     1441 tgctaaaaga agcggtttcg aatgttatgg aagctttaca tagaaatatc gagtctaaaa
     1501 agtcgggtta taaagataaa gttctttatc atgtgtttac catgaatact tactggtata
     1561 tttacatgag gacgaagaac accgagttgt cgaaattatt gggtgagagt tacatgagga
     1621 agaattacaa agttgttgca gaagaagctg cttacttgta cgagaagcaa gcatggggcc
     1681 cgttggtgag attacttgat aaagaagaca tggtagatgt taacgatgaa ggaatcgagt
     1741 ctgttgcaaa gggtaagatc gaagcgtttt tgaaggggtt tgaagagatc gcgcaaaggc
     1801 atacaagtaa gtacataatt cccgagcccg atttacgtga gcagataaaa gaggcaaccg
     1861 tgaagcttat tgtcccggtt tattcagaat ttttggacga gttttcgagt ttgttaactg
     1921 tgaaatcata ctcgccacct gaatcgattg aggaattgtt gggtcagatt tttttgggaa
     1981 atggtcgaaa ttcgtcgatg ggttctcgac gacgtgagat taaggatcag gctgaaggga
     2041 gaaattcggt gtcgagcgat atagagccga tgccacgaag gagttcagtt agcaggtttc
     2101 aacgaaaccg atcgaatact agtgatgctt ag
//
LOCUS       XM_071830757            2124 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            EXO70I-like (LOC139840492), mRNA.
ACCESSION   XM_071830757
VERSION     XM_071830757.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2124
                     /gene="LOC139840492"
                     /note="exocyst complex component EXO70I-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139840492"
     CDS             1..2124
                     /gene="LOC139840492"
                     /codon_start=1
                     /product="exocyst complex component EXO70I-like"
                     /protein_id="XP_071686858.1"
                     /db_xref="GeneID:139840492"
                     /translation="MEDFPILTKLESACSELKIVLDSSTNLQTNLQKFDDNYTSLQES
                     LNAASRRLAPIQSLSIASKSLETRINRAVSPALVLIDGFRISESLQRKLVDISTKLPD
                     QKSQNRRLRLLIKYVDCVDKLNIAINLISQEGGLAIQRLQEVVEFLSRTKATDQFRTQ
                     RLRETLVTLKALYETEVDSMKFDGLLDEALLNLQDEFEGILLQLRHHNIGVHGDDGGD
                     VAEVAELGTEMEVEVLRRISETLTANDCLDICIDIFVKVRYKRAAKALMRLNPDYLRT
                     YKPEEIDEMEWESLETSISLWIQHFELAVRTVFVSEKNLCNHVLTNIMDGMIWQECFV
                     KIADKIMAVFFRFGEGVARSNKEPQKLFKLLDMFSSLENLKIEFSDIFEGEPGADICS
                     RFRELEKLLIHASTKVYWEFGLQIEGNQDGLPSPQDGSVPKLVRYAINYLKYLTSDNY
                     SAPMAQVLRTEHIWKAGILSAPETDKDLLKEAVSNVMEALHRNIESKKSGYKDKVLYH
                     VFTMNTYWYIYMRTKNTELSKLLGESYMRKNYKVVAEEAAYLYEKQAWGPLVRLLDKE
                     DMVDVNDEGIESVAKGKIEAFLKGFEEIAQRHTSKYIIPEPDLREQIKEATVKLIVPV
                     YSEFLDEFSSLLTVKSYSPPESIEELLGQIFLGNGRNSSMGSRRREIKDQAEGRNSVS
                     SDIEPMPRRSSVSRFQRNRSNTSDA"
     misc_feature    889..1959
                     /gene="LOC139840492"
                     /note="Exo70 exocyst complex subunit; Region: Exo70;
                     pfam03081"
                     /db_xref="CDD:460798"
ORIGIN      
        1 atggaagatt tcccaattct gaccaagcta gaatcagcat gttctgaact caaaatcgtt
       61 ttagattcgt caacaaactt gcaaacaaac cttcaaaaat tcgacgataa ctatacttct
      121 ctacaagaaa gtctaaatgc agcttcaaga agattagcgc ctattcaatc gctttccatt
      181 gcctcaaaat cacttgaaac acggatcaac cgggcggttt caccagcgct agtactcatt
      241 gacgggttca ggatatctga atctttgcag cgaaaacttg tcgacatttc aacaaaactt
      301 cctgaccaaa agtctcaaaa caggagacta aggttactaa tcaagtatgt tgattgtgtt
      361 gataagttga atatagcgat taatttgatt agtcaagagg gtgggcttgc gattcaacgg
      421 ctgcaagagg tggtggagtt tttgagtagg actaaagcta ctgatcaatt tagaactcaa
      481 cggttaagag agacgttggt cactttaaag gcgttgtatg aaacggaagt tgattctatg
      541 aagtttgacg ggttactaga cgaggcttta ttaaacttac aagatgagtt tgaagggatt
      601 ttgctgcagc tgaggcatca taatattgga gtgcacggtg atgacggtgg tgatgtggcg
      661 gaagttgcag agttggggac ggagatggag gttgaagtac ttagacggat atcggaaacg
      721 cttacggcta atgattgctt ggatatatgc atcgacatct tcgtcaaggt aaggtataag
      781 agagcagcaa aagcactaat gagactaaac ccagattacc taagaaccta caaacccgaa
      841 gaaatcgatg agatggaatg ggaaagttta gagacttcca taagcctatg gatccagcac
      901 ttcgaactag cagtccgaac cgttttcgtt tctgaaaaga atctatgcaa ccacgtactt
      961 acaaacatca tggacggtat gatctggcaa gaatgcttcg ttaaaatagc cgacaaaatc
     1021 atggcagtat tcttccggtt cggggaaggt gttgcccgaa gtaataaaga gccacaaaag
     1081 ctctttaagt tattagacat gtttagttct ttagaaaatc tgaaaatcga gttttccgac
     1141 atttttgaag gggagccagg agctgatata tgttctcggt ttcgggaatt agaaaagctt
     1201 ctcattcatg cttcgactaa agtttattgg gaatttgggc ttcagattga aggtaaccaa
     1261 gatgggttgc cttcaccaca agatgggtcg gttccaaaat tagtccgata cgccattaac
     1321 tacctgaaat acctaacttc tgataattac agtgcaccca tggctcaggt actcagaacc
     1381 gaacacatat ggaaggcggg aattttatca gcacccgaga ccgataaaga tttgctaaaa
     1441 gaagcggttt cgaatgttat ggaagcttta catagaaata tcgagtctaa aaagtcgggt
     1501 tataaagata aagttcttta tcatgtgttt accatgaata cttactggta tatttacatg
     1561 aggacgaaga acaccgagtt gtcgaaatta ttgggtgaga gttacatgag gaagaattac
     1621 aaagttgttg cagaagaagc tgcttacttg tacgagaagc aagcatgggg cccgttggtg
     1681 agattacttg ataaagaaga catggtagat gttaacgatg aaggaatcga gtctgttgca
     1741 aagggtaaga tcgaagcgtt tttgaagggg tttgaagaga tcgcgcaaag gcatacaagt
     1801 aagtacataa ttcccgagcc cgatttacgt gagcagataa aagaggcaac cgtgaagctt
     1861 attgtcccgg tttattcaga atttttggac gagttttcga gtttgttaac tgtgaaatca
     1921 tactcgccac ctgaatcgat tgaggaattg ttgggtcaga tttttttggg aaatggtcga
     1981 aattcgtcga tgggttctcg acgacgtgag attaaggatc aggctgaagg gagaaattcg
     2041 gtgtcgagcg atatagagcc gatgccacga aggagttcag ttagcaggtt tcaacgaaac
     2101 cgatcgaata ctagtgatgc ttag
//
LOCUS       XM_071830758             480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            phosphatase PP2A-4 catalytic subunit-like (LOC139840493), mRNA.
ACCESSION   XM_071830758
VERSION     XM_071830758.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..480
                     /gene="LOC139840493"
                     /note="serine/threonine-protein phosphatase PP2A-4
                     catalytic subunit-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139840493"
     CDS             1..480
                     /gene="LOC139840493"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase PP2A-4
                     catalytic subunit-like"
                     /protein_id="XP_071686859.1"
                     /db_xref="GeneID:139840493"
                     /translation="MRFIGYEWVLWFAGLRLGVIGLPGERFLVERFTGYDKCKVGYEI
                     GVIYPSVFDTVLAEKVSSMENRKQITQEGYMCNLLWSDPDDCCGWGISPRGAGYTFGQ
                     DISEEFNHTNSFKLIPRDHQLVMEGFNWGHIKFCGFEASAAIVAENVSCRLHMEHMI"
     misc_feature    <193..396
                     /gene="LOC139840493"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; Region: MPP_superfamily; cl13995"
                     /db_xref="CDD:472684"
ORIGIN      
        1 atgaggttta ttggatacga gtgggttctt tggtttgcag gcctcaggtt aggtgttatt
       61 ggattgcccg gtgaacgttt tttggttgag cggtttacag ggtacgacaa atgcaaggtt
      121 ggatacgaaa tcggggttat atatccttct gtttttgata cggttcttgc tgaaaaagtg
      181 tcatcaatgg aaaacaggaa acagattact caagaggggt acatgtgtaa tcttttatgg
      241 tctgaccctg atgactgttg tggttggggt atctcacctc ggggtgctgg atacacattt
      301 ggtcaagaca tatctgagga gttcaatcat acgaatagct ttaaactgat tcctagggat
      361 catcagttgg ttatggaggg attcaactgg ggtcatataa aattttgtgg ttttgaagca
      421 tctgctgcca ttgtagctga aaatgtaagt tgcagattgc atatggaaca tatgatctga
//
LOCUS       XM_071830760            3975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840494), mRNA.
ACCESSION   XM_071830760
VERSION     XM_071830760.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3975
                     /gene="LOC139840494"
                     /note="uncharacterized LOC139840494; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139840494"
     CDS             1..3975
                     /gene="LOC139840494"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686861.1"
                     /db_xref="GeneID:139840494"
                     /translation="MKKIKINKINNIVDLLPDDLLGEILSRVGQNSSTQLGVARLVCK
                     AFYKQSQHPLVYQRLSFDRLPVGYWGIPQMIYLYHHCLVNKNPNAIFCRGLLIYLDGK
                     YTQDDLRYLKQASNCQLVEAVYVYGLVMFASHDVNEKEIGLKILNQTFPPIPDYVVAV
                     RTKVYDLIHQTWRMNHHPFADVETRCPISSHNGYLPRRIGFELKKPGCMSCFWAYELK
                     LFVNQYDITNTTRSKVVTSSTTQYTSNYVDYGNLTYICSACGAKLWHNTKVGKKIRFL
                     PGILTLLFERKEAISGKNKTKPSSSRYSLDEDLIRQIMEVLDEHNPLVKTFRMAHDRF
                     LETPNFEMKIKSIGRRTKDGCNYNLPTVDEVAALIVGDINVSLYDERDIIIDSRIEGL
                     KRIFELHTEYLALQYPLLFIYAEDGYKTDILHRDVDEHSTRVKKRVTMREFFAYKLQE
                     RVVPTLVHLGQVYTVEFQKRGLPHAHICLFLDERNKMPQPKDVDQYICAEIPDEIEEP
                     ELYQLVSDLMIHGPCGEKNPSCQCTDSDRKCTKRFPKPFSDVTKTDEDGYPIYRRRDD
                     GRMVTKQGHELDNRSVVAYNPYLLKRYQVQLNVEWCNQVASISYLFKYINKGNDRITA
                     QLCNAETDEIQEYYDCRYVSSCEAVWKIMKFDIHHHYPSVIRLPFHLEGQQQIIFDEE
                     ELIDEVLEKPSVNTSMFIERMNCNASNQEARELTYVEFPTKFIGIKIIEVGLGVKGPT
                     SYEDIRTVNGQIFNSYRDACYDLGLLDDDKEYIEGTQIEIELLKDLTLQEIDKLLQRN
                     SSSLRSFSSIPCPSNDTRNISENHLIIDELSYDKISLTNEHSDFITKLTYEQKEAYDQ
                     IIKAVNHGKGGVFFLYGYGGTGKTFLWKTLSAELRRKGEIVLNVASSGIAALLLAGGR
                     TAHSRFHIPLHPTDESFCSISPSSKLGELIRRTKLFIWDEAPMVNKMCIEALDHSMRD
                     ICRQSNPDSMDTLFGGKIVVFGGDFRQILPVIQKGKREDIVGVSLNSSYLWDYVTFLK
                     LTVNMRLCGIETDTNTRIFAQWILDIGNGDVGESEDEVFDIKIPQDLLITDLDDPIGS
                     IISTIYPDYLFNLGNPEYYQQRAILAPTHEVVNIINDRMMMYLDREERSYLSSDSICV
                     SQRNTDFNSELYTTDFLNSIEVGGLPKHNLRLKIGVPVMLLRNIDQAGGLCNCTRLQI
                     VHLGEKIIKEKILTGSNVGKITALSRMLIILTDKRIPFKFQRRQYPLSVCFAMKINKS
                     QGQSLSRVDLFLPKPVFSHGQLYVALSRVTNREGIKILILDKDNKISNTTKNVVYKEV
                     LQHL"
     misc_feature    37..180
                     /gene="LOC139840494"
                     /note="Region: F-box-like; pfam12937"
                     /db_xref="CDD:463757"
     misc_feature    <1384..1431
                     /gene="LOC139840494"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    2536..3621
                     /gene="LOC139840494"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(2623..2643,2857..2859)
                     /gene="LOC139840494"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
     misc_feature    3607..3891
                     /gene="LOC139840494"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    order(3655..3666,3772..3774,3778..3783)
                     /gene="LOC139840494"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350196"
     misc_feature    3790..3792
                     /gene="LOC139840494"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atgaaaaaaa ttaaaattaa taagatcaac aatattgtcg atcttcttcc tgatgatttg
       61 cttggtgaaa tattatcaag agtcggacaa aattcttcga ctcaattggg tgttgctcga
      121 ttggtttgca aagcctttta taagcaatcc cagcatccat tggtttatca aaggctttcc
      181 tttgatcgtt tacctgtagg gtattggggt atccctcaaa tgatttatct ttaccatcat
      241 tgtttggtaa ataaaaaccc taatgcgatt ttttgcaggg gtttgttaat ttatcttgat
      301 ggaaaataca cccaagatga cctccgttat ttaaaacaag catcaaactg ccaattagta
      361 gaggctgttt atgtttatgg tttggttatg tttgcttctc acgatgtaaa tgaaaaggaa
      421 atcggtttaa aaattcttaa tcagacattc ccaccgatac cggattatgt ggttgctgtg
      481 agaacaaagg tttatgacct catacatcaa acctggagaa tgaaccacca tccttttgct
      541 gacgtggaaa caaggtgccc tatatccagt cacaatggtt atttaccaag aagaattggg
      601 tttgaactaa agaaaccagg atgcatgtcg tgcttttggg cttatgagtt gaagcttttt
      661 gtaaatcaat atgatataac caacacaact cgatcaaaag tggtgacttc atctacaacc
      721 caatatacat caaactatgt tgattacggc aatcttactt atatatgttc cgcttgtggt
      781 gctaaattat ggcataatac gaaagtaggg aaaaaaatac ggtttctccc aggcattctc
      841 actttgttgt ttgaaaggaa agaagcaatc agtggaaaaa acaaaacaaa gccttcgtct
      901 tcacgctatt cactagacga ggatctcatt cgtcaaataa tggaagttct cgatgaacat
      961 aatcctcttg tcaagacatt taggatggct catgaccggt ttctagaaac acctaatttt
     1021 gaaatgaaaa ttaagtcaat tggtagacga accaaagatg gatgtaatta taatctgcca
     1081 acggtagacg aagtagcagc acttattgtt ggtgatatca atgtttcttt gtatgacgaa
     1141 agggatatta taatagacag tcgtattgaa gggttaaaaa gaatttttga gcttcacacc
     1201 gaatatttag ccctacaata tccacttctg tttatttatg cagaagatgg gtacaagaca
     1261 gacattcttc atcgtgatgt cgatgagcat tccacaagag tgaaaaagag ggttactatg
     1321 cgtgaattct ttgcatataa acttcaagaa cgtgttgttc ccacacttgt gcacttgggt
     1381 caagtctata ccgttgaatt tcagaaacgt ggtttgcctc atgcccatat ctgcttattc
     1441 cttgatgaaa gaaacaaaat gcctcaacca aaagatgtag atcagtatat atgtgctgaa
     1501 ataccggatg aaatcgaaga accagaactt tatcaactcg tgtcagattt aatgattcac
     1561 ggtccttgcg gtgaaaagaa tccatcgtgc cagtgcactg attcagacag aaaatgtaca
     1621 aaacggtttc caaaaccttt ctcggatgta acaaaaaccg atgaagacgg ttatccaatt
     1681 taccgaagaa gggatgatgg aagaatggta acaaaacaag gtcatgaatt ggataacaga
     1741 agtgtggtag cttataatcc ttacctcctt aaaaggtacc aagtccaact caatgttgag
     1801 tggtgtaacc aagttgcttc aattagttat ttgttcaaat atatcaacaa aggtaatgat
     1861 aggattacag cgcagctatg taatgcagaa actgatgaaa ttcaagaata ctacgattgt
     1921 cggtatgttt catcgtgtga agccgtttgg aagattatga agttcgatat acatcatcat
     1981 taccccagcg ttataagact accattccat ttggagggac aacagcaaat catttttgat
     2041 gaagaggaat taattgatga ggttttagaa aagccatcag tcaatacgtc aatgttcatc
     2101 gaacggatga attgtaacgc ttctaaccaa gaagcacgcg aattgactta tgttgaattc
     2161 ccgacaaagt tcattggaat aaagataatc gaagttggat taggcgttaa aggtccaact
     2221 tcctatgaag atatccgcac ggtaaatggt cagatattta atagctacag agacgcctgc
     2281 tacgatttag gtttattgga tgatgataag gagtatatag aagggacaca aattgagatt
     2341 gaactattaa aagatttgac tttacaagag attgacaaac tacttcaacg caatagtagt
     2401 tcattgagaa gttttagttc aattccatgc ccatcgaatg atacaagaaa tatttcagaa
     2461 aaccatctta ttatagatga gctctcctac gacaaaattt cacttacaaa tgaacattca
     2521 gatttcatta caaagttaac atacgaacaa aaggaggcat acgatcagat aataaaagcg
     2581 gttaatcacg gcaaaggagg tgtgttcttt ttgtacggtt atggtggtac tggaaaaacc
     2641 ttcctttgga aaacactctc agctgaattg cgcagaaaag gagaaattgt tttaaatgtt
     2701 gcgtcaagtg ggatagcagc tttgctatta gctggaggtc gaacggcgca ttcacgtttt
     2761 cacataccgc ttcatcctac ggatgagtca ttttgttcta tttctccaag cagcaaattg
     2821 ggtgagctta ttcggagaac aaaactgttt atttgggatg aggccccgat ggttaacaag
     2881 atgtgcattg aagcactgga tcattctatg cgtgatatat gtcgtcaatc caatcctgac
     2941 agtatggata ctctctttgg gggtaaaata gttgtgtttg gtggtgactt tagacaaata
     3001 ttaccggtta ttcaaaaagg taaaagagaa gatatagtag gtgtatctct aaattcttcc
     3061 tatttgtggg attatgttac ttttttaaaa cttacagtta acatgagatt atgtggtatt
     3121 gaaactgata ccaatactag aatttttgct caatggatac ttgacatagg caacggtgat
     3181 gtcggtgaat ctgaagacga agtttttgat attaaaattc cacaagatct tttgataaca
     3241 gatcttgatg atccaattgg ttcgatcatc tcaactattt atccagatta tctttttaat
     3301 cttggcaatc cagaatatta tcagcaacgt gcaattcttg ctccaactca tgaagtagtt
     3361 aacatcatta atgatagaat gatgatgtat ttggacagag aagaaaggtc atatttgagc
     3421 tcagacagta tatgtgtgtc acagagaaac actgacttta atagtgaact atacactacc
     3481 gatttcctaa atagcattga agttggtggt ttaccaaagc acaatctgag gctcaaaatt
     3541 ggtgtaccag ttatgttact tcgaaatata gatcaggcag gaggtttgtg taactgtaca
     3601 cgtttacaaa ttgtgcactt aggagaaaaa atcatcaagg aaaaaatttt aacaggctca
     3661 aacgtgggga agattacagc gttatcacgt atgcttatca tactgacgga caagagaata
     3721 cctttcaaat tccaaagaag acaatatccg ttgtcggttt gctttgcaat gaaaataaat
     3781 aaaagtcaag gacaatcact atcgcgtgtt gatttatttc ttccaaaacc ggtgtttagt
     3841 catggacaac tatacgttgc actatctcgg gttactaatc gggaaggaat caagatatta
     3901 atcttagaca aggataacaa aatttccaac acaacaaaaa atgtggtata caaagaagtc
     3961 ttgcaacact tatag
//
LOCUS       XM_071830761             507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g67623 (LOC139840495), mRNA.
ACCESSION   XM_071830761
VERSION     XM_071830761.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..507
                     /gene="LOC139840495"
                     /note="putative F-box protein At1g67623; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139840495"
     CDS             1..507
                     /gene="LOC139840495"
                     /codon_start=1
                     /product="putative F-box protein At1g67623"
                     /protein_id="XP_071686862.1"
                     /db_xref="GeneID:139840495"
                     /translation="MDPLSKNILDVLRNDILGEILSRVGQQSSLHLSVARLVCKDFLK
                     QSEHYLVYRRLSLDRWPILAWGIPEMVYLLHRCVINKNPNAIFRLGLISYFNGVNTYL
                     GLRYLEEASNYGLNQAVYVYGLIMFSSHDLEEKDKGLKILNARFPPLPNLVVFVRMDV
                     YGLLQQLW"
ORIGIN      
        1 atggatccac tttcaaagaa tattctagat gttcttcgta atgacatact tggtgaaata
       61 ttgtcaagag tcggtcaaca atcatcgctt cacttgtctg ttgccagatt ggtttgcaaa
      121 gactttctta agcaatccga acattatttg gtttatcgaa ggctttcatt agatcggtgg
      181 cctatcttag cttggggtat cccggaaatg gtctatcttc tccatcggtg tgtgataaat
      241 aaaaacccta atgctatttt tcgattgggt ttgataagtt atttcaatgg agtaaacacc
      301 tacttagggc ttcgttattt agaagaagca tcaaactatg gtcttaatca ggcagtttat
      361 gtttatggtt tgatcatgtt ttcatctcat gatttggagg aaaaggataa gggtttaaaa
      421 atacttaatg caagatttcc accattgccg aatttggtgg tttttgtcag aatggatgtt
      481 tatggtttgt tacaacaatt atggtga
//
LOCUS       XM_071830762            1164 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840496), mRNA.
ACCESSION   XM_071830762
VERSION     XM_071830762.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1164
                     /gene="LOC139840496"
                     /note="uncharacterized LOC139840496; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840496"
     CDS             1..1164
                     /gene="LOC139840496"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686863.1"
                     /db_xref="GeneID:139840496"
                     /translation="MATSKNIIRVSEIDGRKVNFTIKIKVVRLLQKLGYGYDEGKPTL
                     ELIVSDEEGTKIVINIRNSLKAKFDNLIREWGFFCISNAAVVDSPLQFRTKHIQHEYR
                     LMFTKKTTVVPFPPTEWRGTNGFSFIPFDVLRSKGLKVGVSAANYSEIQEFRNTGELK
                     SKYINLQLIDLDLTQIHSSEDSICSLAPSLSISSARDPNSFFKKAQYVGLDRLNPSME
                     GIYIIQATINTILPDDTWFKVPIRVEKQTGTSSFTVFESVVKKFVTQSAYELMKALSE
                     DDDYPEELELLIQKTLLFKIDVSGYNKERGIRNYTVKDATDDPTCFELYESFKCASNA
                     SGSQTVDLSHDTCFSPPLKKIKQEGIKSPPSVKSSTTKVKFSDRPKRLRSSDS"
     misc_feature    61..333
                     /gene="LOC139840496"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(61..63,229..231,235..237,241..243,328..330)
                     /gene="LOC139840496"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(76..84,133..144,148..150,169..177,181..183,226..228,
                     250..258,304..312)
                     /gene="LOC139840496"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    <709..954
                     /gene="LOC139840496"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(718..729,733..735,751..759,763..765,868..870,
                     889..897,922..924,928..933)
                     /gene="LOC139840496"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(871..873,877..879,883..885,946..948)
                     /gene="LOC139840496"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggccacat ccaagaacat aattcgggtt tcagagattg acggacggaa agttaatttt
       61 accataaaaa ttaaagtcgt ccgtctcctt caaaagcttg gatatggtta cgatgaaggc
      121 aagccaactt tggagctaat cgtttcggat gaggagggca ctaagattgt aatcaacatc
      181 cgtaactccc ttaaggccaa atttgataac ctcattaggg aatggggctt cttttgtatt
      241 tctaatgctg ctgtagttga tagtccgcta caattccgga ccaaacatat ccaacatgag
      301 tacagactca tgtttactaa gaaaacaact gttgtgccat tcccaccaac cgaatggaga
      361 ggaactaatg gttttagttt catccctttc gatgttttga gatctaaagg ccttaaagtt
      421 ggagtttcag cagcaaatta ttctgaaata caggaatttc gaaacactgg tgaacttaag
      481 tccaagtaca tcaatcttca gctcattgat ttagacctca ctcaaatcca ttcttctgag
      541 gattccattt gttcgttagc tccttcgctg tcaatttctt ctgcacgtga tccaaactcc
      601 ttttttaaaa aggctcagta tgttggttta gatcgcttga acccgtccat ggaaggcatt
      661 tatattattc aggccacaat caataccatt cttcccgacg acacttggtt taaagtgccg
      721 attcgtgtag aaaaacaaac cggcacatcg tctttcactg ttttcgaatc tgttgtgaag
      781 aagttcgtta cccaatcggc ttatgagtta atgaaggctt tgtctgaaga tgatgattat
      841 cctgaagagc tggaacttct tatacaaaag acccttttat ttaagataga tgttagtggt
      901 tataacaaag aacgtggaat tcgaaactac actgttaaag atgcgaccga tgacccaaca
      961 tgtttcgaac tctatgagag tttcaagtgt gcctctaatg cttctggaag tcagaccgtt
     1021 gatctcagtc atgatacctg tttcagccca cctcttaaaa aaatcaaaca agaaggaatc
     1081 aaatctccac catctgttaa gtcttcaaca accaaggtta aattctctga tcgtcccaaa
     1141 cgtttacgct catccgattc atga
//
LOCUS       XM_071830763             540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides LOB domain-containing
            protein 38-like (LOC139840497), mRNA.
ACCESSION   XM_071830763
VERSION     XM_071830763.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..540
                     /gene="LOC139840497"
                     /note="LOB domain-containing protein 38-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139840497"
     CDS             1..540
                     /gene="LOC139840497"
                     /codon_start=1
                     /product="LOB domain-containing protein 38-like"
                     /protein_id="XP_071686864.1"
                     /db_xref="GeneID:139840497"
                     /translation="MSCNGCRVLRKGCGVDCVLRPCLESIQSPAAQGHATLFLSKFFG
                     RSDLINFLSAVPSNHQRSALFQSLLYEAVGRTVNPVNGAMGLMSTGNWHLCEAGVQTV
                     LSGGSPHPIGDEIWINEVDESSDSFQTKGTWAMMMLKNQTNASNSKTDGNANDQNMSF
                     KPISDVAPSNEPKLLDLFK"
     misc_feature    4..309
                     /gene="LOC139840497"
                     /note="Lateral organ boundaries (LOB) domain; Region: LOB;
                     pfam03195"
                     /db_xref="CDD:460843"
ORIGIN      
        1 atgagctgca atggctgtcg tgttttgcgc aaaggttgtg gcgttgattg tgtgcttaga
       61 ccttgtttgg aatcaatcca atcacctgct gcacaaggcc atgccacact ctttctctcc
      121 aagttctttg gccgtagcga tctcatcaat ttcctctccg ctgtcccctc caatcaccaa
      181 cgcagtgctt tgttccaatc gcttctgtat gaagcggttg gacgaacagt gaatccagtg
      241 aacggtgcga tgggactcat gtcaacggga aactggcacc tttgtgaggc gggtgtacaa
      301 accgtgcttt ccggtggttc accacatcct attggtgacg aaatttggat taatgaagtg
      361 gacgaaagtt cggattcatt ccaaaccaaa ggtacttggg ccatgatgat gctcaagaac
      421 cagactaatg caagcaactc aaagacagat ggtaatgcta atgatcaaaa tatgtccttc
      481 aagccgattt ctgatgtggc gccgagtaat gaaccaaaac tgttggatct ttttaagtaa
//
LOCUS       XM_071830764            1473 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pumilio homolog 12-like
            (LOC139840498), mRNA.
ACCESSION   XM_071830764
VERSION     XM_071830764.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1473
                     /gene="LOC139840498"
                     /note="pumilio homolog 12-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840498"
     CDS             1..1473
                     /gene="LOC139840498"
                     /codon_start=1
                     /product="pumilio homolog 12-like"
                     /protein_id="XP_071686865.1"
                     /db_xref="GeneID:139840498"
                     /translation="MDHRRNAHYFGTDIPLPLYPPPFVPDSECFPPRLSDLASPIDVD
                     WSLSNVFSCMNLSPETYDTAPMFPWNTLSGRTGSNVAAGNSVTGGDGFAYPVRGSPVN
                     IPFDQRRFCDDRDPLRGVDYLFDFDQKSNLLSSKKFAYPTRMVGNYLKFRNQNEGLGV
                     RSMKELRGRIYNLAKDQNGCRVLQSLFERSTLEDVEIVVSEVVDFISELMTDQFGNYL
                     IQKLVAVCNDNQITRILFSLIKAPTEIIFVCMNPHGTRAVQKLLENLKQPNQIKLVMK
                     SLRLGAVLLANDPNGHHVIQHCLVNFHGDFVKPILNEIANNCYKIATDKSGCCVLQAC
                     VEHTRGEVRARIVTEILVNSVHLAEDPFGNYVLQHMVGLNIPELTALLVRHLQGNVAS
                     LSCNKYGSNVVEKCLNESEEDVSTQIVLELVRSPNSAMLLVDPYANFVIQAALKVTKG
                     FARNCLLNLISKNMASMRINLYGKKILEKFETKRVPAASS"
     misc_feature    502..1437
                     /gene="LOC139840498"
                     /note="Pumilio-family RNA binding domain; Region: Pumilio;
                     cd07920"
                     /db_xref="CDD:153420"
     misc_feature    order(646..651,658..660,763..768,775..777,877..879,
                     886..888,982..987,994..996,1081..1086,1090..1095,
                     1102..1104,1189..1194,1198..1203,1210..1212,1303..1308,
                     1312..1317,1324..1326,1414..1416,1423..1425)
                     /gene="LOC139840498"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:153420"
ORIGIN      
        1 atggatcacc gaagaaatgc acactatttc ggaaccgaca ttccgcttcc gttgtacccg
       61 ccgccgtttg ttcccgacag cgagtgtttt ccgccgaggt tgtcggattt agcctctccg
      121 attgacgtcg attggagttt atctaatgtg ttttcgtgta tgaatctttc acccgagaca
      181 tacgacactg ctccgatgtt tccctggaac actctctccg ggcgaaccgg ttcaaatgtt
      241 gctgccggta acagcgtgac cggcggcgat ggttttgctt atcctgttcg aggttcgccg
      301 gtcaacattc cgtttgatca acgcaggttt tgtgatgata gagatcctct ccgaggtgtt
      361 gactatttgt ttgactttga ccaaaagtca aacttattat ctagtaagaa atttgcttac
      421 cccacacgga tggttggtaa ctatttgaaa tttcgaaacc agaatgaggg tttgggtgta
      481 cggtctatga aagaattaag gggaagaatc tataatctag ctaaagatca aaatggttgt
      541 agggttctac aatctttatt tgaaagatca acacttgaag atgttgaaat tgttgtatct
      601 gaggtggttg atttcatatc tgaattaatg acagatcaat ttgggaatta tttaattcag
      661 aagcttgttg cagtgtgcaa tgataatcag ataactagga tactattttc tctgattaaa
      721 gccccaacag aaatcatttt tgtgtgtatg aatccacatg ggactagagc tgtgcaaaaa
      781 ttgttggaaa atttgaaaca gccaaatcag attaagttag taatgaagag tctacgcctc
      841 ggtgcagtct tattagccaa tgacccgaac ggtcatcatg tgattcagca ttgtctggtt
      901 aacttccatg gtgattttgt caagcctatt ctcaacgaaa tagcaaacaa ttgctacaaa
      961 atagccacag ataaaagtgg ttgctgtgtc ctgcaggcat gtgtagaaca cacacgggga
     1021 gaagtcagag cgcgtatagt cactgaaatt ttggtcaact cagtacacct agccgaagac
     1081 cctttcggca actatgttct acagcacatg gtgggactga atataccaga attaaccgca
     1141 ttgcttgtta ggcaccttca agggaatgtt gcatctcttt cgtgtaataa gtatggtagt
     1201 aatgttgttg agaaatgttt gaatgaatct gaagaagatg tatcgacaca gatcgtactt
     1261 gaactagtta gaagcccgaa ttcggctatg cttttagtag acccttatgc caattttgtt
     1321 attcaagctg cactaaaagt taccaaggga tttgcgcgta actgcctgct caacctaatt
     1381 tccaaaaaca tggcttccat gcgaatcaac ctttatggta aaaagatact cgaaaaattt
     1441 gaaacgaaga gggtcccagc tgcatcgagc tag
//
LOCUS       XM_071830765            1608 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides metal transporter
            Nramp3.2-like (LOC139840499), mRNA.
ACCESSION   XM_071830765
VERSION     XM_071830765.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1608
                     /gene="LOC139840499"
                     /note="metal transporter Nramp3.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins"
                     /db_xref="GeneID:139840499"
     CDS             1..1557
                     /gene="LOC139840499"
                     /codon_start=1
                     /product="metal transporter Nramp3.2-like"
                     /protein_id="XP_071686866.1"
                     /db_xref="GeneID:139840499"
                     /translation="MDLDPLPLKRNVDDDNLIDTTSLDQEIDRLLSSSDEELDQISYQ
                     PPDIKIPHDDNIHHVMLPDDTTLPPLPPFSLKKLWKFTGPGFLMSVAFLDPGNLEGDL
                     QAGAVSGYSLLWLLLWSTAMGLLIQLLSCRIGVVTGRHMAEICRDEYPYWAILFLWFM
                     AEIALIAADIQEVIGSAIAIKILSNGGVPLWCGVLITAFDCFIFLFLENYGVRKLEAV
                     FAGFISIMALSFAWMFADTNPNGKELLLGLLIPKVGSKTIQKAVGLLGGIMTPHNIFL
                     YSAVVQSRKVDVKKKGQVQEALYYYTIESSIAVFVTFTINLFVTTIFAKGFYNTKEAD
                     NIGLLNAGHFLEERYGDGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLDLPMR
                     KWLRTLITRSCAIVPTIIIAVWFNRSEDSLDVLNQWLNVLQGLQIPFALIPLLKLVSS
                     ERLMGPFKIKPTMKMISWLVAGLVITVNGCVLMEVFISKVKGFMVGFLVSFVNTVYVA
                     FIWYLISREA"
     misc_feature    226..1362
                     /gene="LOC139840499"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; Region: SLC5-6-like_sbd; cl00456"
                     /db_xref="CDD:444915"
ORIGIN      
        1 atggatcttg acccattacc attaaaacgg aatgttgatg atgataatct catagatacc
       61 acatctcttg atcaagaaat cgaccgtcta ttatcatcat ctgacgaaga acttgatcaa
      121 atttcttatc aacctcctga tatcaaaatt ccccatgatg ataatattca tcatgttatg
      181 ttaccagatg acaccacatt accaccttta ccaccatttt ctttgaagaa actatggaaa
      241 ttcacgggcc ccggtttttt aatgagcgta gcgtttcttg atcctggtaa ccttgaaggc
      301 gatctacaag ctggtgcggt ttcagggtac tcgttattat ggttgttgtt gtggtccact
      361 gcaatggggc ttttgatcca gctcttgtca tgtaggattg gtgtggtgac tgggcgccac
      421 atggcggaaa tctgtagaga tgaatacccg tattgggcga ttttgtttct atggtttatg
      481 gcagaaatag cgctcattgc ggccgatatt caggaggtga ttggaagtgc aattgctatc
      541 aagattttaa gcaatggagg tgtgcccctc tggtgtggcg ttttgattac ggctttcgat
      601 tgtttcatat tcttgtttct tgagaactat ggagtgagga aattggaagc tgtttttgct
      661 ggttttattt caataatggc actttcattt gcatggatgt ttgctgatac caatcctaat
      721 ggaaaagaac tactattagg tcttttgata ccaaaagttg gctcaaaaac aatacagaaa
      781 gcagttggtt tactgggtgg tataatgact ccccacaata tcttcttata ttcagcagtt
      841 gtacaatcaa gaaaagttga cgtaaaaaag aaaggtcaag ttcaagaggc gttgtactac
      901 tacacgatag aatcatccat tgccgttttt gtaactttca cgatcaatct gtttgttact
      961 acaatttttg ccaaaggatt ctacaacaca aaagaggccg ataatattgg cctattaaac
     1021 gcaggtcatt ttttagaaga acgatacggt gacgggcttt ttcctattct ttacatttgg
     1081 ggaatcgggt tactggcagc gggtcaaagt agtactttga caggtactta cgcgggtcag
     1141 tttataatgg gcgggttttt agaccttcca atgagaaaat ggttaagaac gttaattaca
     1201 cgaagttgcg ccattgtgcc aactattatc atagcagttt ggtttaacag atcggaagat
     1261 tcgttagatg ttttaaatca atggctaaat gtgcttcaag gtttgcagat tccttttgct
     1321 ctaatcccac ttcttaagct ggtatcaagt gagcgtttaa tgggtccgtt taagatcaaa
     1381 cctacaatga agatgatttc gtggcttgtg gctggcctgg taatcacagt taatgggtgt
     1441 gttttaatgg aggttttcat atcaaaagtt aagggattta tggttggttt tttggtttcg
     1501 tttgtgaata ctgtttatgt tgcgttcatt tggtacttga tatcgcgcga agcgtagcat
     1561 gacagggtaa tagtaaagat atgcagatgt tatgttgtac tagtaaca
//
LOCUS       XM_071830766            1331 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840500), mRNA.
ACCESSION   XM_071830766
VERSION     XM_071830766.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1331
                     /gene="LOC139840500"
                     /note="uncharacterized LOC139840500; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840500"
     CDS             1..1302
                     /gene="LOC139840500"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686867.1"
                     /db_xref="GeneID:139840500"
                     /translation="MPKTVTDMKSKSKPRRKPLRDVSNKTSLTTSTMKSKFLNTQQQQ
                     QQQQQQQSVTTCGGGDGCSDSFDRLLLAHSNLSTLIHQIDELVVQAVEQKVKNTKEIE
                     SFTDVLKEMQTSLKPWIPRFQKVFMTQAVRSKKSLETSITSTKIAPINRETSKGLDSP
                     YIDKFDFLVSPSPLVSWRADCAAEGGRNLFMLTPIPRPTPFTSKLNKPSKSKSVLKQI
                     TTDVSAGPVDSVFSSPEKLISVNDTIVVSTPYIKMSPPKSCIIMEPASECWNKTNAPK
                     NSTMHSRHLTLKYPELFGIRSGNKLGNVRKMAEASPNWCMPISPPKTCVLLEPNDDKI
                     KDVRTNVPKAGGFTSAVSCNEVIESTPICKDLDTTILKGKRAGENTLKKELWTRFEAA
                     TGHGFHLKASVNQETSNNNDDSRGKGFMDLLEEVSCDEEKF"
ORIGIN      
        1 atgccgaaga ccgtcaccga catgaaatcg aaatccaaac caagaagaaa acctcttaga
       61 gacgtatcaa ataaaacttc tttaactaca tcaactatga aatctaaatt cttaaatact
      121 caacaacaac aacaacaaca acaacaacag caatcggtaa ccacttgcgg cggtggtgac
      181 ggttgcagcg actcgttcga tcgccttctt cttgctcact ccaatctctc gactcttatt
      241 catcagatcg atgaacttgt tgtacaagca gtggaacaaa aagtgaagaa cacgaaggag
      301 attgagtctt ttactgatgt gttgaaagaa atgcaaacat cattaaagcc atggattcca
      361 agattccaga aagtttttat gactcaagca gtaaggtcta aaaagtcatt ggaaacaagt
      421 ataacaagta cgaagatagc tcctataaac agggaaacaa gcaaaggtct tgacagtccg
      481 tatatagaca agtttgactt tttggtgtca ccttcacctc tcgtgtcttg gcgtgcggac
      541 tgtgctgcag aaggtggtcg aaaccttttt atgctaacac cgattcctag acctacaccg
      601 ttcacttcta aactaaacaa accatccaaa tccaaatcag ttttaaaaca gataaccact
      661 gatgttagtg ccgggccagt tgacagtgta ttttcttcgc cagaaaagtt gatatcggtg
      721 aatgatacca tagttgtttc aacgccttac ataaagatgt ccccaccgaa gtcttgtata
      781 atcatggaac ctgcttctga atgctggaat aagactaatg ccccgaagaa ctcaactatg
      841 cattctaggc atttgacatt aaaataccct gagctttttg gtattagatc tggtaataaa
      901 ctgggaaatg ttagaaaaat ggcagaagca tcgccgaatt ggtgtatgcc aatttcacca
      961 ccgaagacat gtgttctact ggagcctaat gatgataaaa ttaaagatgt tcgaacaaac
     1021 gtgcccaagg caggtggttt tacaagtgct gtttcatgca acgaagttat tgaaagtact
     1081 ccaatttgta aggatcttga tacaacaatt ttaaaaggca agcgtgctgg tgagaacaca
     1141 ctaaagaaag aactgtggac gagattcgag gcggcaaccg gtcacgggtt tcatttgaaa
     1201 gcatctgtga atcaagagac tagtaataat aatgatgata gtagaggtaa agggtttatg
     1261 gatttgttgg aagaagtttc ttgtgatgaa gaaaagttct gactaaatgc ttagatatgt
     1321 acaaattctg t
//
LOCUS       XM_071830767            2316 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 23 (LOC139840501), mRNA.
ACCESSION   XM_071830767
VERSION     XM_071830767.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2316
                     /gene="LOC139840501"
                     /note="probable protein phosphatase 2C 23; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139840501"
     CDS             78..2147
                     /gene="LOC139840501"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 23"
                     /protein_id="XP_071686868.1"
                     /db_xref="GeneID:139840501"
                     /translation="MGNGVGKLTICFTGKDVVRRKNQIPVVISDPLDDLGHSFCYVRP
                     DQTYISSSKVHSADETTTFRLISGAAVSANTATPLSTSLQDFYSYNTIENKASAFESS
                     TSFASIPLQPLPRNSINSGPLLYSGQIPYSGPIERGFLSGPIERGFQSGPLFSEKGVH
                     EQFQRSFSQAGYGYKSRSSKGSLIRVIQRVISRTFVTQGQNSTVTPVIKSVGSLNSVE
                     KNNELTISSANLSSESSFLDDDDEGFSQSQNLEWAQGKAGEDRVHVVVSEEHGWVFVG
                     IYDGFNGPDAPDFLLSNLYQFVHKELKGLLWDDDNNKLNSSKSNSSSSVQSLESLDSH
                     VDDHTEKYRFYDLQENYPSGTQDFKNSRRKKSKNSKFRHRVSENQRWWKCEFDRERLE
                     LDRRLKEYSNSNGSDSTNHSEVLKALSRGLKKTEESFLDIADQMLDENPELALMGSCV
                     LVMLMKGEDVYVMNVGDSRAVLAQKPEPDLWRQDLERINEETLNDLEVSDTDNGCINP
                     SLTACQLSIDHSTSTEEEVQRIKSEHADDPCAVTNDRVKGSLKVTRAFGAGFLKQPKW
                     NNALLEMFQIDYLGTSPYINCVPYLHHHKLGVRDRFLILSSDGLYQYFTNEEAVSEVE
                     LFIQWSPDGDPAQHLVEEVLFRAAKKAGMDFHELLEIPQGDRRRYHDDVSIIVISLEG
                     RIWRSCV"
     misc_feature    1230..2117
                     /gene="LOC139840501"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; Region: PP2Cc; cd00143"
                     /db_xref="CDD:238083"
ORIGIN      
        1 aattcctact aaaagcacaa aatacaatct aaatttgaat ccttgaatta caaaaacaat
       61 ttatactttc ttcatctatg ggaaatgggg ttgggaaatt aacaatttgt ttcaccggaa
      121 aggatgtcgt tcgccggaaa aaccaaattc cggttgtaat ttccgaccca ttagatgatt
      181 tggggcattc tttttgttac gttaggcccg atcaaactta catatcatca tccaaagttc
      241 attccgccga tgaaacaaca actttccgat taatctccgg cgccgccgtg tccgccaaca
      301 ccgccacccc actttcaaca tcccttcaag atttctattc atacaacaca attgagaata
      361 aagcttcagc ttttgaaagc tcaacatcgt ttgcatcaat cccacttcaa cctttacctc
      421 gaaatagtat aaattcaggt cctttgttat attcgggtca aattccttat tcgggtccta
      481 ttgaaagagg gttcctttct ggtccaattg aacgtgggtt tcaatcgggt cctctttttt
      541 ctgaaaaggg tgttcacgaa cagtttcaga gaagcttttc acaagcgggt tatggttata
      601 aatcaagatc aagtaaaggg tctttaataa gggttataca aagagtaatt tcaagaactt
      661 ttgttacaca agggcaaaat tcaaccgtta cccctgttat taagagtgtt ggttctttga
      721 attctgttga gaaaaacaat gaattgacaa ttagtagtgc taatttgagt agtgaaagta
      781 gttttcttga tgatgatgat gaaggattta gtcaaagtca aaaccttgaa tgggctcaag
      841 gtaaagctgg tgaagataga gtacatgttg tggtttctga agaacatgga tgggtttttg
      901 ttgggattta tgatggattt aatggtcctg atgctcctga ttttttgttg tcaaatttgt
      961 atcaatttgt tcataaagag cttaaaggtt tgttatggga tgatgataat aacaaactta
     1021 attcatcaaa atccaattca agttcatctg ttcaatcttt ggaatctctt gacagtcatg
     1081 ttgatgatca tactgaaaaa tatcggtttt atgacttaca agaaaattac ccatctggaa
     1141 ctcaggattt taagaattca aggagaaaaa agagcaagaa ttcaaagttt aggcatcgag
     1201 tatccgagaa tcaaagatgg tggaagtgcg aattcgatcg tgaaagatta gaattggatc
     1261 gaagactaaa agagtattcg aattcaaacg ggtcggattc aaccaatcat tcggaggttt
     1321 taaaagcgtt atctcgcggg cttaagaaaa ccgaagagtc ctttttagat attgcagacc
     1381 aaatgcttga tgaaaatcct gaattagctt taatgggttc ttgtgttctt gttatgttaa
     1441 tgaaagggga agatgtttat gtgatgaatg taggtgatag tcgtgcggtt ttagctcaaa
     1501 aacccgagcc tgatctatgg agacaagatc ttgaaaggat aaatgaagaa actttaaatg
     1561 atcttgaggt ttcagatacc gataatggat gtataaaccc gagcttaact gcttgtcaac
     1621 ttagcatcga tcatagtact tcaactgaag aggaagttca aagaattaaa agtgaacacg
     1681 cagatgatcc ttgtgcagtg acgaatgatc gtgttaaagg ctcgctaaaa gtcactcgag
     1741 cttttggtgc tggttttctc aaacagccta aatggaacaa tgcactactt gaaatgtttc
     1801 aaattgacta tcttggaact tcaccataca taaattgtgt cccatatctt caccatcaca
     1861 aattaggcgt tagagaccga ttcttgatat tatcatcaga cgggttatat caatacttca
     1921 ctaatgaaga agcggtttct gaagtcgagc tctttattca atggtcaccc gatggtgatc
     1981 cagctcagca tttagttgag gaggttcttt ttcgtgcagc aaagaaagca ggtatggatt
     2041 ttcatgagtt gctggaaata ccacaagggg atcgtaggcg ttatcatgat gatgtttcga
     2101 ttattgttat ttcactcgaa ggaaggattt ggaggtcgtg tgtgtaagta aacagtaaaa
     2161 actacgacaa ctacattatg tatacagagg aaaattcaga tcgcttgctc gaattttttg
     2221 atattttctt ttcattaatt tttgagaaaa acatgtttac ttgtgatggt gctaaaactt
     2281 tgccccatgt tgatcaatac aaatatttca tacaaa
//
LOCUS       XM_071830768            1341 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840502), mRNA.
ACCESSION   XM_071830768
VERSION     XM_071830768.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1341
                     /gene="LOC139840502"
                     /note="uncharacterized LOC139840502; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840502"
     CDS             1..1341
                     /gene="LOC139840502"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686869.1"
                     /db_xref="GeneID:139840502"
                     /translation="MSVRGSSASSMGQKRKNPSPPDARAFQMSVDTATETDDAITGMF
                     LINSSLARVLFDCGANCSFMSVTLCDKLKLPINVLSEPLRIEVSDRRTVPVTTYVSGV
                     TIEIDGNEFPMTCLIMPIPSFDVVLGIDWLSNHKASIKCDKKINQFPFANGTRAVAQG
                     EWGGFNCPLISMMKAKKSLAKGCDSFLAYVIDAKKEKKSVSDILIVSEFPEVFPDQLS
                     GLSPVREVEYKIELLPGSTPVAKAPYRLAPSEIHDMMSQIQELLDRGFIRPSSLPWGA
                     PVLFIKDFSKITGPLTKLTRKDVTFRWSDEQENAFQTLKQLLCQAPILVLPEGTEDFV
                     VYCDTSLAGLGCVLMQREKVIAYASRQLKTHEKNYPTNDLELAAVVFALKLWRHYLYG
                     THCVICTDHKSLQHIFLQKELNMRQRQWQELIKDYDCEILYHPGKTNVVADEIV"
     misc_feature    67..435
                     /gene="LOC139840502"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(166..168,172..174,178..180,253..261,376..378)
                     /gene="LOC139840502"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    166..174
                     /gene="LOC139840502"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    166..168
                     /gene="LOC139840502"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(253..264,274..285)
                     /gene="LOC139840502"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    712..>867
                     /gene="LOC139840502"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1000..1329
                     /gene="LOC139840502"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty3; cd09274"
                     /db_xref="CDD:260006"
     misc_feature    order(1012..1023,1108..1116,1123..1125,1198..1200,
                     1297..1299)
                     /gene="LOC139840502"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260006"
ORIGIN      
        1 atgtcagtca gaggatcatc tgcttcttca atgggacaga agcgaaagaa tccttcacca
       61 cctgatgcaa gagcctttca aatgtcggtt gatacagcta ctgaaaccga cgatgcgatt
      121 accggtatgt ttctgataaa ttcttcgctg gctcgtgtgt tatttgattg tggagcgaat
      181 tgctctttta tgtctgttac attatgtgat aagttgaaat tgcctatcaa cgtattatct
      241 gaacctttaa gaatagaagt gagtgatcgt agaacggttc cagtcacaac ctatgtgtct
      301 ggagtaacca ttgaaataga tgggaatgaa ttccccatga cttgtcttat tatgcctata
      361 ccaagctttg atgtcgtatt aggtatagat tggttaagca accataaggc aagtataaaa
      421 tgtgataaga aaataaatca atttcctttt gccaatggga cacgtgctgt ggcccaaggt
      481 gaatggggtg ggtttaattg tccattaatt tcgatgatga aagctaagaa atcattagcc
      541 aaggggtgtg attcgtttct agcatatgtg atcgatgcaa agaaagagaa gaaatccgtg
      601 tccgatatcc tgatagtgtc cgaattccca gaagtcttcc cagatcaatt gtcgggttta
      661 tcgccagtta gggaagtaga atataaaatc gagttgttgc cgggatccac gccagttgct
      721 aaagctccgt atcgattagc tccgtccgag attcatgata tgatgtcgca aattcaggag
      781 ttgctagatc gtgggtttat tcggccaagt tctttgccat ggggtgctcc agtgttgttt
      841 attaaagatt tctcaaagat cacgggtcca ttgaccaagt taactaggaa agatgtaact
      901 tttcgatgga gcgatgaaca agaaaatgcc ttccagacat tgaaacagtt gttgtgccaa
      961 gctccgattt tagtgttacc tgagggtaca gaagatttcg ttgtatattg tgatacgtca
     1021 ttagccggat tgggttgtgt gttaatgcag agagagaaag ttattgccta tgcctcaaga
     1081 cagttaaaaa ctcatgagaa gaattatccg acaaatgatc tagagttggc tgcggttgta
     1141 tttgcattga aattatggag acattatctt tacggcactc attgtgtgat ttgtaccgac
     1201 cacaagagtc ttcagcatat atttttgcag aaagaattaa acatgcgtca gagacagtgg
     1261 caagagctga tcaaggatta tgattgtgaa attctttatc atccaggaaa gacaaatgta
     1321 gttgcagatg agattgtgta a
//
LOCUS       XM_071830769            5172 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840503), mRNA.
ACCESSION   XM_071830769
VERSION     XM_071830769.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5172
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5172
                     /gene="LOC139840503"
                     /note="uncharacterized LOC139840503; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840503"
     CDS             1..5172
                     /gene="LOC139840503"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686870.1"
                     /db_xref="GeneID:139840503"
                     /translation="MLRACVLEYGGSLDSHLPLIEFAYNNTYHSSIGMPPYEMLYGRR
                     CRMPTCWLEAREKQFSGLEIVQLTAEKVAIAREKLKLQEIDKICRPIRADGRGKLAPR
                     YIGPFRIQQVLNDQTVVLDLLAELAGIHNTFNVCYLRKCKVEDESQILPLQDLKVDMN
                     KKLVEEPVRIVDKKITKLRHKQIPMVLVEWKHSLGSNLTWETEEMHPYGYGVYPGHFG
                     CIRAVAACIRTVAGSKRKVKIPIKFTNSVHNLRSKSKEVDSVQSSESDEADRLNDASD
                     DFLVESESKLDESGVMENPDWLKDNFPPLYNEELNKASTTVSPGSHTTVSMNETHTKK
                     VSYAKAIKSDDDACKLSFIPLSVDNDGSEIVVFDEIYIEESSNLWNTTTYGYVIGGHM
                     SFGMLRFNLRKMWSRFGIKDIIMDNKQICYFKFKDVEGMNKVIDQGPWIVQGKPLFVA
                     KWSPELNIEKVEPSKLHVWVKLTDMPLEAWNKKGISAIASKLSKPMVMDQMTTTMCSK
                     GVGRATFARVMVEIDASKGYQDGIKKVNVTYDWKPALCTHCAVFGHNHSECKHRPRTS
                     VELKNTAGSNINKGHDKEGFQVVQPKKYKEKNDGNKIVKPKQVYVPRVLPEKVVTPLR
                     QWHLNGKTKEAFQQSINKYAILSDNDDEYEANDGRNEKGLDIPEEDVIYVDKGGTSHF
                     EVNELNGADPGRIRRDLWKELRIHAVITKGFPWILMGDFNTTRVVSEHSAGGSFMTEE
                     MKEFNDCINQIEIDDLRSSGFHFTWTKSLRNPHCTNLKKLDRIMCNDEFGVRYPQAFG
                     MFLPYLISDHSPYILHIPNSLDKKKRAFRFMNHLAHKDEFLDIIRQRWSEQVVGYKMF
                     QVVSKLKLLKKDLISLNWRNGNVFNLVKEKKEQLNICQERIDKDPHDVNVRQQANQAL
                     LEYENAKKDESILLQQKVKIKWLTEGDRNTRFFHNMLKKRKMKSRIDSICDDHGVNYE
                     GDQVASQFVNHFMNFLGDHGNCRSILDLGDIFTNKLSSEEANEMIIPVTDVEIKTAMF
                     DIDDNKASGPDGYTSLFFKKAWDIIGKDVCDAIKEFFSNGRLLGEVNATIISLIPKID
                     SPQKVSDFRPIACCNVLYKCISKVLTNRLKSGLKKLVSCTQSAFILERSIHDNLLVAQ
                     ELFKGYNRSRGTKRCAMKIDIQKAYDTVNWKFLEDILCSFGLHSQMIQWIMACITNPS
                     FSICINGEIKCFFKGGRGLRQGDPISPYLFTLVMEVFSLILAKNIDEEPRFKYHIRCK
                     QMKLTHICFADDLVVFCHGDDKSVSVVKKALDEFGQFSGLLPNISKSTVFFGSVPYAT
                     QLKITQVLSFSVGKLPVKYLGVPLLSKKLNIRDCKCLIDKVRSKVSNWRHRKLSYAGR
                     LQLVTSMLSSMQLYWASVYRISYGVIDEIDSLLKGFLWCQGDNSRGKARVAWKDICVP
                     KDQGGLGVKPLREWNETLLVKNLWRVFAHKDTLWSKWVNLEKLKGGSIWDAVYKCNDS
                     WGWKCILDMRNKIQNHVVIDNGSYKWKKNDGSVVNYSTQQVWRDLRSNRVKVGWHHVI
                     WFKGLEPKHAFIMWLATLHRLHTQDKMKSWMPQVQLLCSLCEKTNDSINHLFFQCEFS
                     SCVWKDIKAKLIFRGLPYSLDSIVQRMAVYPFTKNIWNIVNRLVIAACVYFVWRERNA
                     RLFRHQKKEALKVGEDVQNYIRWKLLSLTVKNSSAVRKVADLWNMKWVNNRFKFV"
     misc_feature    1114..1560
                     /gene="LOC139840503"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
     misc_feature    3232..4032
                     /gene="LOC139840503"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(3496..3513,3673..3678,3811..3813,3817..3822,
                     4018..4023)
                     /gene="LOC139840503"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(3496..3513,3673..3675,3817..3819)
                     /gene="LOC139840503"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    3676..3678
                     /gene="LOC139840503"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    4588..4839
                     /gene="LOC139840503"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgttaagag cttgtgtatt agagtatgga ggatcattgg attctcatct acctttgatt
       61 gaattcgctt acaacaacac atatcactct agtataggca tgccgcccta tgaaatgttg
      121 tatggtcgtc gctgtagaat gccgacttgt tggttagaag ctagagagaa acagttttct
      181 ggtctagaga tcgtacagtt aactgcagag aaagtggcaa ttgcacgcga gaaattgaag
      241 ctgcaagaga tagacaaaat atgtaggccg atccgcgcag acggccgagg caaattagct
      301 ccgaggtaca ttgggccatt tagaatacaa caggtgttga atgatcagac agtagtatta
      361 gatcttcttg ctgagttagc gggtattcat aacacattta atgtgtgtta tcttcgtaag
      421 tgcaaggtag aagatgaaag tcagattcta ccactgcaag atttgaaagt tgatatgaat
      481 aagaagttag tggaagagcc tgtaagaatt gtagacaaga agattactaa gctacggcat
      541 aagcagatac caatggtatt agttgagtgg aagcacagct taggttcaaa cctaacatgg
      601 gagacagaag agatgcatcc gtacggttac ggggtgtatc cgggacattt tgggtgcatc
      661 cgtgcggttg cagcgtgcat ccgtacggtt gcaggatcta aacgaaaagt taagattccg
      721 atcaaattta caaattctgt acataatttg agatctaaat caaaagaagt cgatagtgta
      781 caaagctctg aaagtgatga agcagatcgt ttgaatgatg ctagtgatga ttttctggtt
      841 gaatctgaat caaaacttga tgaatctggt gtcatggaga atccagactg gttgaaggat
      901 aactttcctc cactgtataa tgaggaatta aacaaggcat ctacaacagt ttctcctggt
      961 tctcacacta ctgtaagtat gaatgagact cacactaaaa aagtatctta tgctaaagct
     1021 attaaatctg atgatgatgc ttgtaaactg agttttattc cactttctgt tgataatgat
     1081 ggatctgaaa ttgttgtgtt tgatgaaatc tatattgagg agagtagcaa tttgtggaat
     1141 actactactt atggctatgt tattggtggt catatgtcat ttggtatgct tagatttaat
     1201 ctaaggaaga tgtggagtag gtttgggatt aaggatataa taatggacaa taaacagatc
     1261 tgttatttca agtttaagga tgtggagggt atgaacaaag ttattgatca aggaccatgg
     1321 atagtgcaag gtaaaccttt atttgtggct aaatggtccc ctgagctgaa tattgagaag
     1381 gttgaaccaa gtaaacttca tgtctgggtc aagttaactg atatgccttt agaggcatgg
     1441 aacaagaaag ggattagtgc tattgctagc aaattaagca aacctatggt tatggatcaa
     1501 atgactacca caatgtgttc taagggagtt ggaagggcaa cctttgctag ggttatggtg
     1561 gaaattgatg catctaaggg ttatcaggat gggattaaga aggtgaatgt tacttatgac
     1621 tggaaacctg ccttatgcac tcactgtgca gtgtttgggc ataatcatag tgaatgtaaa
     1681 cataggccca gaactagtgt ggaactcaag aacactgcag gttctaacat taataaaggg
     1741 catgataaag aaggttttca ggtggttcaa cctaagaagt ataaggagaa gaatgatggt
     1801 aacaaaattg tcaaaccaaa acaagtgtat gtccctagag tccttcctga aaaagttgtt
     1861 actcctttaa ggcagtggca tctaaatggt aaaacgaaag aggctttcca acaaagtatt
     1921 aataagtatg ctattttatc tgataatgat gatgagtatg aagctaatga tggaaggaat
     1981 gaaaagggtt tggatattcc agaagaggat gtcatctatg tagataaagg tggcactagt
     2041 cattttgaag taaatgaatt gaatggtgca gatccaggta gaattagaag agatttatgg
     2101 aaggagttaa ggattcatgc agtcatcact aaaggttttc catggattct tatgggtgat
     2161 tttaacacca ctagagtcgt tagtgagcat agtgctggag ggtcattcat gacagaggag
     2221 atgaaggaat tcaatgattg tattaatcaa attgagattg atgatcttag aagttcaggt
     2281 tttcacttta cctggactaa atcccttaga aatcctcact gtactaatct caaaaaacta
     2341 gatagaatca tgtgtaatga tgagtttggt gttagatatc ctcaagcttt tggcatgttt
     2401 ttgccctatt tgatttctga tcacagtccc tatattctgc atattcctaa cagccttgac
     2461 aagaagaaga gagcttttag atttatgaat catttagcac ataaagatga gttccttgat
     2521 attattaggc aaaggtggag tgaacaggtt gtgggttata aaatgttcca ggtagtctct
     2581 aaattgaaat tactcaaaaa agatttaata agtcttaact ggagaaatgg gaatgttttc
     2641 aaccttgtta aagaaaagaa ggagcaacta aatatttgtc aagaaagaat tgacaaagat
     2701 cctcatgatg ttaatgtcag acaacaggct aatcaagctc tattggaata tgaaaatgcc
     2761 aaaaaggatg aatcaatcct tctgcaacag aaagttaaaa taaagtggct tactgaggga
     2821 gacagaaaca caagattctt tcataatatg ctaaagaaaa ggaaaatgaa gagcaggatt
     2881 gatagcattt gtgatgatca tggtgttaat tatgagggtg atcaagttgc tagccaattt
     2941 gtaaatcact ttatgaattt tttgggtgat catggtaact gtagaagcat actggatttg
     3001 ggtgatattt tcaccaacaa gctctctagt gaagaagcaa atgagatgat tattcctgtt
     3061 acagatgttg aaatcaaaac tgccatgttt gacattgatg ataataaagc atcaggccct
     3121 gatggttaca cctctttatt ctttaagaag gcatgggata taattggtaa agatgtttgt
     3181 gatgccatta aagagttttt ctctaatggc aggctgttgg gggaggttaa tgctaccata
     3241 atatcactta ttccaaagat tgattcccct caaaaagtgt ctgacttcag acccattgct
     3301 tgttgcaatg tcctctataa gtgtattagt aaagtcctaa ctaataggct aaaaagtggt
     3361 ctgaagaagc ttgttagctg cacccaaagt gcattcattc ttgaaaggtc tatacatgat
     3421 aatcttttag ttgctcaaga actttttaaa ggttataaca gatctagagg gacaaagagg
     3481 tgtgctatga agattgacat acaaaaggca tatgatactg tcaattggaa gtttctagaa
     3541 gacatattgt gcagttttgg gcttcatagt cagatgattc agtggataat ggcctgtatt
     3601 actaatcctt ccttctcaat ttgtattaat ggtgagatta agtgtttctt taagggtggg
     3661 agaggtttaa gacaaggaga ccctatatct ccttatcttt ttaccctagt aatggaagtg
     3721 ttttctctta ttctagctaa gaatattgat gaggagccca ggttcaagta tcacatcaga
     3781 tgtaaacaaa tgaagcttac acatatttgt tttgccgatg atcttgtggt tttttgtcat
     3841 ggagatgata agtctgtgag tgttgtcaaa aaggcattgg atgaatttgg tcagttttct
     3901 ggtttattac ctaatataag caagagcact gttttttttg gaagtgttcc ttatgccact
     3961 cagcttaaga ttactcaggt tttatccttt tcagttggta aattgcctgt taaatactta
     4021 ggtgtccctt tattatccaa gaaattaaat attagggatt gcaagtgttt aattgataag
     4081 gttagaagca aggtgagtaa ttggagacat agaaagctct cttatgcagg aagattgcag
     4141 ctagttactt ctatgttgtc ttctatgcaa ttatattggg cctctgtgta tagaatttca
     4201 tatggtgtta tagatgaaat tgatagcctt cttaaaggat ttttatggtg ccaaggtgat
     4261 aattctagag gcaaagctag ggttgcctgg aaagatattt gtgtgcctaa ggatcaaggg
     4321 ggtttgggtg ttaaacctct tagggaatgg aatgaaactt tattggttaa aaacctgtgg
     4381 agggtgtttg ctcataaaga taccctttgg agtaagtggg tcaatttgga gaagttaaag
     4441 ggtggtagca tatgggatgc agtttacaaa tgcaatgata gttggggttg gaaatgtatc
     4501 ctagatatga gaaataaaat tcagaatcat gtggttattg acaatggtag ttataaatgg
     4561 aagaaaaatg atggcagtgt tgttaattat tctactcagc aggtttggag ggatttaagg
     4621 agtaatagag tcaaggttgg gtggcatcat gtcatatggt ttaaggggct agagccaaag
     4681 catgctttta ttatgtggtt ggctactctt cataggcttc acactcaaga taaaatgaaa
     4741 tcatggatgc ctcaagtgca actgttatgc tctttatgtg aaaaaactaa tgattcaatt
     4801 aatcatctat tttttcaatg tgagtttagt agctgtgtat ggaaagatat taaggccaaa
     4861 ttgattttta gaggtctgcc gtatagtctg gacagcattg tgcaaaggat ggcagtttac
     4921 ccatttacta agaacatatg gaatatagtt aacaggcttg taatagctgc ttgtgtgtat
     4981 tttgtatggc gtgaaaggaa tgctaggtta tttcgtcacc agaagaagga agcattaaag
     5041 gtgggtgaag atgtccagaa ttacattcga tggaagctgc tctctcttac agtcaagaac
     5101 tcaagtgctg ttaggaaagt tgcagattta tggaatatga aatgggttaa caatcggttt
     5161 aagtttgtat aa
//
LOCUS       XM_071830770            1518 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450 81Q32-like
            (LOC139840504), mRNA.
ACCESSION   XM_071830770
VERSION     XM_071830770.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1518
                     /gene="LOC139840504"
                     /note="cytochrome P450 81Q32-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139840504"
     CDS             1..1518
                     /gene="LOC139840504"
                     /codon_start=1
                     /product="cytochrome P450 81Q32-like"
                     /protein_id="XP_071686871.1"
                     /db_xref="GeneID:139840504"
                     /translation="MEETHTFSFLFLLVSLIVVFKFFTHKKKKNFAPSPPSIPIIGHL
                     HLMNNGPIHRALKHLSSKYGPIMSLRFGSRPVLVITSAQLAEECFTKNDIVLANRPRL
                     LSGHYLDYECTTIGAAPYGQLWRDLRRIMNLELFSSTQLKSYTTVREDEVRSLIKNLA
                     KDSYQDFAKVEMRSRIQAVSFNIVMIMVANKRYFGTDVDDVEEASKFKEIIRDVFEVF
                     GASNREDFIAVLRWIDYNGYKKRLLKLQHECDSFSQNLINEIRSRRSNSSPKGKDTTF
                     IDSMLTLQESNPQYYTDDIIKGNLLTLLQAGTDTSSVTIEWAMSLLLNHPDVLDKART
                     ELDRYVGQERLVQETDLPNLPNIQCIIYETLRLYHSVPLLVPHEASEDCTIGGFDVTG
                     GTIVLVNAWAIHRDPTIWDDSLSFKPERFEKIGNEGYKFIPFGMGRRQCPGIGLANRV
                     VGLTLAALIQCFEWERVGEELVDLSEGKGLTMPKEVPLEARCRARETMSHVLMEL"
     misc_feature    190..1464
                     /gene="LOC139840504"
                     /note="cytochrome P450 family 81; Region: CYP81; cd20653"
                     /db_xref="CDD:410746"
     misc_feature    order(295..297,370..372,382..384,406..408,550..552,
                     907..909,916..921,928..933,1108..1110,1120..1125,
                     1129..1131,1297..1308,1315..1329,1336..1341)
                     /gene="LOC139840504"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410746"
     misc_feature    order(640..642,652..654,724..726,904..906,913..918,
                     1123..1125)
                     /gene="LOC139840504"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410746"
ORIGIN      
        1 atggaagaaa ctcatacttt cagctttctt tttcttttgg tgtctttaat tgttgtcttc
       61 aaatttttta cacacaaaaa gaagaaaaat tttgcaccga gtccaccttc tatcccaata
      121 attggccatc ttcatctaat gaataatgga ccaattcata gagccttgaa acacctttct
      181 tccaaatatg gtcctatcat gtctcttcgg tttggctcac gcccagttct tgtaataacc
      241 tcagcgcaac tagccgaaga atgctttacc aaaaatgaca tcgtattagc caatagacca
      301 cgtcttttga gtgggcatta tcttgattat gagtgcacca caattggtgc cgcaccctat
      361 ggtcaactct ggagagacct tcgtcgtatc atgaaccttg aattattttc gtcaactcaa
      421 cttaaatctt ataccactgt tagagaagac gaagttcgat cattgattaa gaatcttgct
      481 aaagattctt atcaagattt tgcaaaagta gaaatgaggt ccagaattca agcagtgtcg
      541 tttaacatag tcatgattat ggttgctaat aaacgctatt ttgggacaga tgtggatgac
      601 gttgaagaag ctagtaaatt caaagagatt ataagagatg tgtttgaagt tttcggtgca
      661 tcaaatcgtg aagactttat tgcagtgtta cgatggatcg attataacgg gtataagaag
      721 aggctactaa aactacaaca tgaatgtgat agcttttccc aaaatctgat aaacgaaatt
      781 agaagtagac gatccaattc ttcaccaaaa ggaaaggata cgacatttat cgactctatg
      841 cttactttgc aagaatccaa cccgcaatac tacactgatg atataatcaa aggcaatcta
      901 ttaacattgc tacaagcggg tactgacacc tcatcagtga caatagaatg ggccatgtcg
      961 cttcttttaa atcatcctga tgtgttggac aaagctagaa cagagctcga tagatatgtt
     1021 ggacaagaac gcttagtaca agagactgat cttcccaatc taccaaacat ccaatgcatc
     1081 atctacgaaa cactacgact ataccattct gtaccactat tggtaccaca tgaggcatca
     1141 gaagactgca cgattggagg gtttgatgta accggtggaa caatagtgtt ggtgaacgca
     1201 tgggctatcc atagggaccc aacaatatgg gatgactcat taagtttcaa acctgagagg
     1261 tttgagaaaa taggaaatga ggggtataag tttataccat ttgggatggg tcgtagacaa
     1321 tgtcctggta taggacttgc gaatagggtt gttgggttaa cgttagcagc gttgatccaa
     1381 tgctttgaat gggaaagggt tggtgaagaa ttggtggact tgtccgaagg caaaggtctg
     1441 accatgccta aggaggtgcc attggaagct cgttgcagag cacgcgaaac tatgagtcat
     1501 gttctaatgg aactttga
//
LOCUS       XM_071830771            2073 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein HAPLESS 2-like
            (LOC139840507), mRNA.
ACCESSION   XM_071830771
VERSION     XM_071830771.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2073
                     /gene="LOC139840507"
                     /note="protein HAPLESS 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840507"
     CDS             1..2073
                     /gene="LOC139840507"
                     /codon_start=1
                     /product="protein HAPLESS 2-like"
                     /protein_id="XP_071686872.1"
                     /db_xref="GeneID:139840507"
                     /translation="MKPLIFITLIFTHQIVNIACVQILSKSKLEKCEKVSGNINDPLN
                     CTKKIVIDLAVPSESNGEEATIVAEVAEVKENASSNPRALRMPPQITIKKSAAYAQYE
                     LTYVRDVAYRPEEYAFMTRKCSYWGDPSVVGPCERLFYDNGEMIPHTQPMCCPCGPDH
                     RVPTSCGNIFNQIKKGKANTAHCLRFPGDWYHVFGIGRRSTGFNIRISVNSGGKTSDV
                     VIGPNNRTATSLDNFLRANLIGDYTGYINVPSFEEFFLVIPRQGAPGQPKDLGRDFIK
                     WMLLERVRFTLDGRDCDKIGVGYQAYLEQPSFCYVPFKSCIHNQLWNFWESDKYRIDR
                     NQDPLYVVQGRFPRINEHPNAGRLSFSIGITEAVNSNLMLELAADDIEFVYQRSSGKI
                     ISIIVPTFEALTQFGTAVIKANNTGQVEASYSMTFDCIGGVTPMEEQCFIMKPNEVTS
                     RFFRLFLASDQAANYACIAILKDSDYHEVDRAECQFATRATILNTGTQLPFNPPKEVV
                     KKGFFATIEGWWHSFWDGMVDFITGKTCRVKCSSFFDIDCHLRHMCMSWMVLFGLFLV
                     IFPTVATLVWLLHEYGVFDPIYDWWQDHFWDDEQRIQHIKKISLHGLHMKKPTHHTDG
                     QHKRRKHTHSEHHVKKNERKHGRSKVASKVQHPLYVKKGDHVVNERRQKKERDDNTRK
                     HLHSKGKG"
     misc_feature    127..1473
                     /gene="LOC139840507"
                     /note="Male gamete fusion factor; Region: HAP2-GCS1;
                     pfam10699"
                     /db_xref="CDD:431445"
ORIGIN      
        1 atgaagccac tcatattcat tactctgatt ttcactcatc aaatcgtgaa tatcgcatgc
       61 gttcaaatct tatcaaaatc aaagctcgaa aaatgcgaaa aggtttctgg taacatcaat
      121 gatcctctca attgcactaa aaaaatcgtc atcgatttgg cggttcctag cgaatccaat
      181 ggtgaagaag cgacaattgt ggctgaagtt gctgaagtga aggaaaacgc aagttctaac
      241 cctagagcgc tccgtatgcc tccccagatt actattaaaa agtctgctgc gtatgcacaa
      301 tatgaattga cttatgttag ggatgtcgct tatagacccg aggagtatgc ctttatgact
      361 cgcaagtgtt cgtattgggg tgatccaagt gttgtgggtc cctgtgagag attgttttat
      421 gataatggag agatgattcc acatactcag ccaatgtgtt gtccttgtgg gcctgaccat
      481 cgggtaccta cctcatgcgg caatattttt aaccagatta agaaaggaaa ggcaaacacc
      541 gcacactgcc tccgttttcc aggtgattgg taccatgtgt ttggaattgg tcgacgctca
      601 actgggttca acattcggat cagtgtcaat tcaggaggga aaacttcgga tgtggttatt
      661 gggcctaaca accgaactgc cacgtcactt gataactttc ttcgagcgaa cctcattggg
      721 gactatactg gatacattaa cgtaccttct ttcgaagagt tctttcttgt tattcctaga
      781 cagggtgcgc caggtcaacc aaaagatctg gggagggatt ttattaagtg gatgctgctt
      841 gagagagtga ggttcacatt agatgggcgt gattgtgata aaataggtgt cggttatcaa
      901 gcgtatcttg agcagccaag tttctgctat gtacctttca agagttgtat ccataatcag
      961 ttatggaatt tctgggaatc tgataagtat aggatcgaca gaaatcagga tccactttat
     1021 gttgtgcaag gaagatttcc aaggataaat gaacatccaa atgcaggaag actttcattt
     1081 tctataggaa ttactgaagc tgtaaattca aaccttatgt tagaattggc agcggatgat
     1141 atagaatttg tatatcagag gagttctggg aaaattataa gcatcatagt tcccactttt
     1201 gaagcactta ctcagttcgg gactgcagta atcaaagcta acaacactgg ccaagtggag
     1261 gcttcctaca gcatgacgtt tgattgcatt ggaggtgtca ctccaatgga ggaacaatgt
     1321 ttcattatga agccaaacga agttacatca cgatttttca gactgttcct tgcatctgat
     1381 caagcagcca actatgcgtg tattgctata ttgaaagatt ccgactatca tgaagttgac
     1441 agagccgagt gccaatttgc aacgagagca acaattctca acactggaac acagcttcca
     1501 tttaatccac ctaaagaagt agttaaaaaa ggcttctttg caactattga gggatggtgg
     1561 cattcattct gggatggcat ggttgacttc attactggaa aaacttgcag agtgaaatgc
     1621 tccagtttct tcgacataga ttgccactta cgtcatatgt gtatgagttg gatggtgttg
     1681 tttggtctgt ttttggttat ctttcctaca gtggccaccc tagtttggct tctacatgag
     1741 tatggagttt ttgatcccat ttatgattgg tggcaagatc acttttggga tgatgaacag
     1801 aggatccaac atatcaaaaa aatcagtctt catggccttc atatgaagaa accaacacat
     1861 catacagatg gtcaacataa aaggcgtaaa cacactcatt ctgaacatca tgttaagaag
     1921 aatgaacgca aacatggccg aagtaaggta gcaagtaagg tgcagcatcc actttatgtg
     1981 aaaaaaggag atcatgttgt taatgaaaga cgccagaaaa aagaaagaga tgacaatacc
     2041 cgtaaacatt tgcactctaa gggaaaggga tag
//
LOCUS       XM_071830772             575 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein GID2-like
            (LOC139840509), mRNA.
ACCESSION   XM_071830772
VERSION     XM_071830772.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..575
                     /gene="LOC139840509"
                     /note="F-box protein GID2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840509"
     CDS             15..575
                     /gene="LOC139840509"
                     /codon_start=1
                     /product="F-box protein GID2-like"
                     /protein_id="XP_071686873.1"
                     /db_xref="GeneID:139840509"
                     /translation="MVKRSAPASFNNSIMLKKIKTHDPIDHIASVLLDENLLHEIFKH
                     ADAKTLATAACVSKIWHKTSGDERLWEMICTQPSVNLGCNINQLRLVVLALGGFKCLH
                     SQYLLPLSKPSVFVAKLSSSSTVAAATSTSMWSCLPTQPSTVVPVKTNNSVKSSWGKD
                     ELQLSLSLLSIRYFEKLDYNGRKKMI"
     misc_feature    105..236
                     /gene="LOC139840509"
                     /note="F-box domain found in Arabidopsis thaliana F-box
                     protein GID2 and similar proteins; Region:
                     F-box_AtGID2-like; cd22151"
                     /db_xref="CDD:438922"
     misc_feature    order(111..113,123..125,132..137,144..149,159..161,
                     165..170,180..188,192..194)
                     /gene="LOC139840509"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438922"
ORIGIN      
        1 acctcataaa caaaatggtc aaaagatcag ctccggcgag ttttaacaat tcgatcatgc
       61 tcaaaaagat caaaacacac gatcctatcg atcacatcgc atcggttcta ttagacgaaa
      121 acttgttaca tgaaatattt aaacatgctg acgcgaaaac attagctacg gcggcatgcg
      181 tgagtaaaat atggcataag acgagcgggg atgaacgttt atgggagatg atctgtacac
      241 aaccatcagt aaacctcggg tgtaacatta accaactacg tttggttgta cttgcactcg
      301 gtggtttcaa gtgtcttcat tctcaatact tattaccgtt atctaaaccg tcggtttttg
      361 ttgctaaatt gtcgtcttct tcgactgttg cggctgctac atcgacatcc atgtggtcgt
      421 gtttgcctac acagccgtct acggttgttc cggtgaagac taataattcg gtgaaaagta
      481 gttggggaaa agatgagtta caactatctt tatctctttt gtcgatacgt tactttgaaa
      541 agttggatta caatggtcgg aaaaaaatga tataa
//
LOCUS       XM_071830773             771 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840510), mRNA.
ACCESSION   XM_071830773
VERSION     XM_071830773.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..771
                     /gene="LOC139840510"
                     /note="uncharacterized LOC139840510; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840510"
     CDS             1..771
                     /gene="LOC139840510"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686874.1"
                     /db_xref="GeneID:139840510"
                     /translation="MTTRIKNFSNAKITQVELNDFRELYATLVYDLWRDPIDAIQMIA
                     IWIWLGQAITGLPNRLTLMILTLPSQLINKIGDEALSIWACIDNVHMLLTMNFRLTNI
                     LLKKEMPIELFCKYREFSIAGINDVVTVVCANCLKDIWDGAIARNAYMEFLHKKKKSS
                     RDESEPDERTLFVTFSRGYPVAEWEVTKFLTGLFGDCIESFYMEEVAEGEHALFAKIV
                     LNHTSYVNLVLSGHKTAKFTINGRHVWMRKFIPKSSRA"
ORIGIN      
        1 atgaccacgc ggatcaagaa tttttcaaat gcaaagataa ctcaagttga actcaatgac
       61 tttagggagt tgtacgcaac acttgtatac gatctatggc gcgatcccat tgacgcgatt
      121 cagatgatag ccatttggat atggctaggg caggcgataa caggattacc taatcgatta
      181 actctaatga tccttacttt accttctcaa ttgatcaaca aaattggaga cgaagcgtta
      241 tccatttggg cgtgcattga caacgtacat atgttactca caatgaactt ccgattgaca
      301 aatatacttc tcaaaaaaga aatgcctata gagctctttt gcaagtatcg cgagttctcg
      361 atagctggta ttaacgacgt cgtaactgtt gtttgtgcta attgtctcaa ggacatatgg
      421 gacggagcta tagcacgaaa cgcgtatatg gaatttttac acaaaaagaa aaagtcttct
      481 cgtgatgaaa gcgagccaga cgaaaggact ttatttgtga cgttttcgag aggttaccct
      541 gtggctgaat gggaagtaac gaagttctta accggattat ttggagactg cattgagtca
      601 ttttatatgg aagaagttgc tgagggtgaa catgctttgt ttgctaagat tgtgcttaat
      661 catacttctt atgttaattt agttcttagt ggtcataaaa cggctaagtt taccatcaat
      721 gggagacatg tatggatgcg aaagttcatc cctaaaagta gtcgagcata a
//
LOCUS       XM_071830774             911 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable carbohydrate
            esterase At4g34215 (LOC139840511), mRNA.
ACCESSION   XM_071830774
VERSION     XM_071830774.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..911
                     /gene="LOC139840511"
                     /note="probable carbohydrate esterase At4g34215; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139840511"
     CDS             33..911
                     /gene="LOC139840511"
                     /codon_start=1
                     /product="probable carbohydrate esterase At4g34215"
                     /protein_id="XP_071686875.1"
                     /db_xref="GeneID:139840511"
                     /translation="MFPVNISYIFLLISFTTTVANAAAGKSIFLLAGQSNMSGRGGVV
                     NDTWDNYIPPESSPNLSILRLSADLNWQLATEPLHRDIDTNKVCGIGPGMAFASSLLE
                     KDSSIGVVGLVPCAVGGTNMSEWAPGGELYERLIKRAKGALEGGGTIRGLLWYQGESD
                     TVNREDAESYKSKLQSFVLHLRADLLLPVLPVVQVALASGEGEYIEIVREAQLGMDLV
                     NLRTIDAKGLELEPDGLHLTTASQVTVGKMLANAFLQSQPSSITSHASIMPPNLVTNL
                     LPCILGFVHYSFLLYL"
     misc_feature    108..797
                     /gene="LOC139840511"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; Region: SASA; pfam03629"
                     /db_xref="CDD:427409"
ORIGIN      
        1 cacaatccaa cagccacatt acctgtacaa atatgttccc tgtaaatatt tcctacattt
       61 ttctactcat ttccttcacc acaacagtag ccaatgccgc agccggcaag agcattttcc
      121 tgttggccgg gcagagcaac atgtcgggca gaggtggcgt tgttaacgac acatgggaca
      181 attacatccc acccgaatct tctccaaatc tttcaatcct tcgtcttagc gctgacctta
      241 attggcagtt agccactgag cctcttcatc gagacattga tacaaataaa gtatgtggta
      301 tcgggcctgg aatggcgttt gcgagttctt tgttggaaaa agattcgagc attggggttg
      361 tgggtttggt tccttgtgca gttggaggga ctaatatgag tgagtgggcc cctggtgggg
      421 aactttatga acggttgatt aaacgagcaa aaggtgcgtt ggagggtgga gggacgattc
      481 gtgggttgtt gtggtatcaa ggggagagtg acacagtgaa tcgagaagat gcagagtcgt
      541 acaagagtaa actgcagagt ttcgtgctac atttacgggc tgatcttctg ttgcctgtgc
      601 tacccgttgt tcaggtggca ttggcatctg gagaaggaga gtacattgag atagtgagag
      661 aagcccaatt gggaatggac ttagtgaact taaggacaat tgatgcaaag ggtttggagt
      721 tggaaccaga tgggttgcat ttgactaccg catctcaagt aacagtgggg aagatgttag
      781 ccaatgcctt ccttcaaagc caaccttctt ctataaccag tcatgcatca ataatgcctc
      841 caaaccttgt gacaaatttg ttgccttgta ttttaggttt tgtacactat tcatttttac
      901 tttatttgtg a
//
LOCUS       XM_071830776             363 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840512), mRNA.
ACCESSION   XM_071830776
VERSION     XM_071830776.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..363
                     /gene="LOC139840512"
                     /note="uncharacterized LOC139840512; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840512"
     CDS             1..363
                     /gene="LOC139840512"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686877.1"
                     /db_xref="GeneID:139840512"
                     /translation="MANFMVEFICAAPPKPVVEEVPNTVTWELFTDGASSSNGAGAGL
                     ILIGPDGEEHTYALRFEFPASNNEAEYEAFLSGLRMVEKMGIKNLKVSVDSQLVANQM
                     NGMFEARDPAMQNYLRLA"
     misc_feature    79..>360
                     /gene="LOC139840512"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(94..105,193..201,208..210,280..282)
                     /gene="LOC139840512"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggcaaatt ttatggttga atttatatgc gccgcgccac caaagccggt tgtcgaagaa
       61 gtaccaaata ctgtcacgtg ggaactattt actgacggag cgtcaagttc taacggagcg
      121 ggtgcaggtc taattttaat tggcccggac ggtgaggaac atacctacgc gttgcgtttc
      181 gagttccctg cctccaataa tgaagcagaa tatgaggcat tcctgtctgg tttaagaatg
      241 gtcgagaaaa tgggaattaa aaacctgaag gtgtcggttg attcccaact tgtggcgaat
      301 cagatgaacg ggatgtttga agctagagat ccggccatgc aaaattattt gaggttggcg
      361 taa
//
LOCUS       XM_071830777            2004 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840513), mRNA.
ACCESSION   XM_071830777
VERSION     XM_071830777.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2004
                     /gene="LOC139840513"
                     /note="uncharacterized LOC139840513; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840513"
     CDS             1..1770
                     /gene="LOC139840513"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686878.1"
                     /db_xref="GeneID:139840513"
                     /translation="MPELAFLDQHNRRFRSSYGGGAFRDFSPETVMHSNSIQDNSSLF
                     SSSASASASASASVDRCSSSSDVIDRESLVSDMSMNLSGGFRGCLSSRGSDPDPNKSS
                     TIICKNGGPYIKGEKAEAIKGYHDAETDGENQSLFSARSSFSKKEYQNRKSKSEILLR
                     KFDRRRPASMDMNNQMMNVNVTSSSPRLAAAMKSSDSAQKNCMFSNPGTPSYRPASVV
                     GQKGWSSERVPLSVNANRITLMGYNNNNNGRTLPSKWEDAERWIISPVAGDGVSKPLV
                     QEPQRRPKAKSGPLGPHGSAFYSMYSPTMPSFQRGNMRNVVTESPSLTAVNVDNNSTI
                     RYQNGFESNDNLSTLMDHGIMRSVSLHGCSELLTQSMSRINHDDKTGSLTDAGTDISR
                     DVSRRDMATQMSHESSPCSSPNRTTFSSLSTSILSVDLQHIHASKVQVRDVQVDDLVT
                     LTPSFNKNRAQTPGTESDISKNENSDIRYADWEVSEMKKTLSSVKREEAKITAWENLQ
                     KAKAEAAIRKLEMKLEKKRSSSMDKIMHKLRSSQKRAKEMRESVLSTTESRQVAKSSH
                     KAISLIKTRHIRSLSGCFTCPAF"
     misc_feature    1444..1737
                     /gene="LOC139840513"
                     /note="Remorin, C-terminal region; Region: Remorin_C;
                     pfam03763"
                     /db_xref="CDD:427493"
ORIGIN      
        1 atgccggagc tagcatttct cgatcaacat aaccgccggt tccggtcaag ctacggcggt
       61 ggagctttta gagactttag tcctgaaacc gttatgcatt caaattcaat ccaagataat
      121 tccagtttat tttcttcttc agcttctgct tctgcttcag cttctgcaag cgttgatcgg
      181 tgttcatctt cttcggacgt aatcgatcgc gaatctctcg tctctgatat gtctatgaat
      241 ttgtcaggag gtttccgtgg ttgtttatca tctaggggtt cagatccaga tccaaacaag
      301 agttcaacaa taatttgtaa aaatggagga ccctacataa agggggaaaa agcagaagct
      361 ataaaagggt atcatgatgc agaaactgat ggagagaatc aatctttatt ttcagcaaga
      421 agctctttct ctaaaaaaga atatcaaaat cggaagtcaa aatcagaaat tttactaagg
      481 aagtttgacc ggagaagacc agcatcaatg gatatgaaca atcagatgat gaatgtgaat
      541 gtgactagtt cttccccgag attagcagcc gccatgaaaa gctcagattc agcccagaaa
      601 aactgtatgt tttcaaatcc gggaacgcca agttatcggc ctgcgagcgt tgttggtcag
      661 aaaggttgga gttcagaacg tgtgcctttg agtgtgaatg ctaaccgtat tacgttgatg
      721 ggttataata acaataataa tggaaggacg ttgccctcga aatgggaaga tgccgaaaga
      781 tggataatta gtccagttgc aggagacggt gtttcaaagc ctttggttca agagccacaa
      841 aggcgaccca aagcaaagag tgggccgctt gggcctcatg ggtctgcgtt ttactcgatg
      901 tattctccta caatgcctag ttttcaaaga gggaatatga ggaatgttgt cactgaatcc
      961 ccatctttga ctgcagtaaa tgttgataat aattcaacga ttcgatatca gaatgggttt
     1021 gaaagtaatg acaacttatc aacattaatg gatcatggta ttatgaggtc agtcagctta
     1081 cacggttgtt ctgagttgct gactcaatct atgtcgcgga ttaatcatga tgataaaact
     1141 ggcagtttaa cggatgctgg taccgacatt tctcgtgatg tatcaaggag ggatatggca
     1201 actcaaatga gccacgagag tagtccttgt tcatctccaa atagaacaac ctttagttct
     1261 ctgtcaactt caatcctatc tgttgatttg caacacatac acgcttctaa agtacaagtc
     1321 agagacgtac aggtagatga tctggtcact ttaactccat cttttaacaa aaatagagct
     1381 caaactccgg gtacagagtc agacatttcg aaaaatgaaa attctgacat tcgatatgct
     1441 gattgggaag tttcagagat gaaaaagacc ctttcaagtg taaagaggga ggaagctaaa
     1501 attactgcat gggagaatct gcaaaaggca aaagcagagg cagcaataag gaaactagag
     1561 atgaaattgg aaaagaaacg gtcatcatcc atggataaaa ttatgcataa attacgatca
     1621 tctcaaaaaa gggctaaaga aatgagagaa tcagtattat ctactaccga gtctcgtcaa
     1681 gttgccaagt cttcacacaa ggccatctcg cttataaaga ctcgccacat acgctcattg
     1741 agtggctgct ttacctgccc tgcattttga caaattaact gtttgtgttt ggtgtcagcc
     1801 tcatacacca agagttggta tcagtgacag ttctcatcta ctggagtaca aaacacgatc
     1861 actttttgcg atgatctgtc aaacagtaag tacgaaatgt tcaagttcta ggtgcattct
     1921 tctaacctag ttagtctttg atggatttgt tatttagatt gttctgaatg taatttataa
     1981 gctttatgag atgaaatgga taaa
//
LOCUS       XM_071830778             354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cysteine proteinase
            inhibitor 1-like (LOC139840514), mRNA.
ACCESSION   XM_071830778
VERSION     XM_071830778.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..354
                     /gene="LOC139840514"
                     /note="cysteine proteinase inhibitor 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139840514"
     CDS             1..354
                     /gene="LOC139840514"
                     /codon_start=1
                     /product="cysteine proteinase inhibitor 1-like"
                     /protein_id="XP_071686879.1"
                     /db_xref="GeneID:139840514"
                     /translation="MENSFIKILIFFLVFMLYESYAIRRNNNSGDGWRCSDGSAQYDI
                     GLGRFAVDEHNKQMGTSLVYQTNVKACAKMVNSGRNWNMTIKALDNGAGKTYMALVFD
                     IPLGKRTLLSFSGPI"
     misc_feature    136..339
                     /gene="LOC139840514"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; Region: CY; cl09238"
                     /db_xref="CDD:447698"
ORIGIN      
        1 atggagaact cattcatcaa aattttgatc ttcttcttag tgtttatgct ttacgaatca
       61 tatgcaatac gacgcaacaa caattccggt gatggctgga gatgctctga cgggtctgct
      121 cagtacgata taggtttagg acgttttgct gtggatgagc acaataaaca gatgggtacc
      181 tctttggtat accaaactaa tgttaaggca tgtgctaaaa tggtgaattc tggaagaaat
      241 tggaacatga caatcaaggc gctagataat ggtgcgggaa aaacttatat ggctcttgtt
      301 tttgatatac ccttgggaaa aagaacgttg ttatctttta gtggacctat ttaa
//
LOCUS       XM_071830779            2280 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein WEAK CHLOROPLAST
            MOVEMENT UNDER BLUE LIGHT 1-like (LOC139840516), mRNA.
ACCESSION   XM_071830779
VERSION     XM_071830779.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 94% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2280
                     /gene="LOC139840516"
                     /note="protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840516"
     CDS             1..2280
                     /gene="LOC139840516"
                     /codon_start=1
                     /product="protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE
                     LIGHT 1-like"
                     /protein_id="XP_071686880.1"
                     /db_xref="GeneID:139840516"
                     /translation="MSNHYIFTEDLDVKLLHWWVDSSFGGQNPEGFCNKLSGFVSLNL
                     LRVIYSTESIYLSDLSGMGEDKLHGDNRNSFSNGHPEPVSIPPQINHVYQSSPDVGSV
                     DTFLTPEASSGRKKVENINASPIVDKDGSNKQPDESKVHIDTAAPFESVKEVVSRFGA
                     INDWKAHKAQTNERRKFIDQELGKAQDEIPVFKKKSEEAKKEKDQALRDLDSTKRLIQ
                     ELKLNLERSQTEEYQAKQDSELAQLRVQELEQGITDGDSSVAAKTQLEVAKARHLEAA
                     EELVSAKKELEETRKDYGILASERDAALQKAQEVVSTDKENEREVENLTIQLITTKES
                     IESTHQELKRSEEELEKMKQRIVVAKDLKSKLETASNELRKLKDELANYMQGKMGEKD
                     VDDDKFTRKDIQSGVAIAKKNLTEVNHTIERTNEEIMCLKSAEKSLLIELESEKQVLT
                     NDRKQMRLGTGAVVNLESDLQRSRLELDNIRKKEKEAREKLVELPKRLQKVSEETENA
                     KLLAEGASLVLKRAKEGLERAKTGVSSVSSRLDEIQKKIEAARAKEKLALGAISALHE
                     SARGSKREDPKGGVRISLGEYYDLSKRAHEAQEAGDKRVADAMAMIDEAKDSEMQSLN
                     KLTQLNSELAARKEALNVALQKAKMAKECKLNFEEELKIRKGENDSNQESESWGGSFH
                     ALSRKASEKVNHDSSSHNSGASGDNKSNTKSSEPENDSSHDVKGLFKDKKKKKMRVIM
                     PMFSLMTTGKWIFHKKDNS"
     misc_feature    415..2007
                     /gene="LOC139840516"
                     /note="Weak chloroplast movement under blue light; Region:
                     WEMBL; pfam05701"
                     /db_xref="CDD:461718"
ORIGIN      
        1 atgtctaatc attatatttt tacagaggat ttggatgtaa aattgttgca ctggtgggtt
       61 gattcgagtt tcgggggcca aaatccagag ggattttgta ataagctttc tggatttgtc
      121 tccctgaatt tgctgcgtgt tatatactca actgaatcta tatacttgtc tgatctttct
      181 ggaatgggtg aagacaaact tcatggggat aatagaaaca gtttttcaaa cggtcaccca
      241 gaacccgtta gcataccacc gcaaataaac cacgtttatc aatcttcacc tgatgttggt
      301 agtgtcgata cgttcttaac tccagaagct tcttcaggac gcaaaaaggt tgaaaatatc
      361 aatgcatctc caattgtaga taaagatggt tcaaataaac aaccggatga gtcgaaagtt
      421 catatcgata cagctgcacc ttttgaatcg gttaaagaag ttgtttctag gttcggtgcc
      481 attaatgact ggaaagctca caaagctcag acaaatgaga gacgcaagtt catagatcaa
      541 gagctcggaa aagcacaaga cgaaattcca gttttcaaaa aaaagtccga agaagccaaa
      601 aaagaaaaag accaagcttt acgggatctc gacagcacga aaagactaat ccaagaatta
      661 aaactaaacc tcgaaagatc acaaaccgaa gaatatcaag caaaacaaga ttccgaatta
      721 gcccaattac gagtacaaga actggaacaa ggaatcactg atggtgattc aagtgtagcc
      781 gcaaaaacac aactcgaagt agccaaagct cgacacctgg aagcagccga agaactcgta
      841 tcagcaaaaa aagaactcga agaaacacgt aaagattatg gaattttagc atccgaaaga
      901 gatgcggctt tacaaaaagc tcaagaagtt gtttcaacag ataaagaaaa tgaaagagaa
      961 gtcgaaaatt taaccattca acttataaca acgaaggaat caatcgagtc tacacatcaa
     1021 gaattaaaaa gatccgaaga agaattagaa aagatgaaac aacgaattgt tgtagctaaa
     1081 gatttgaagt cgaaacttga aactgcttcg aatgaacttc ggaagttgaa agacgagtta
     1141 gcgaattata tgcaaggaaa gatgggtgaa aaagatgtag atgatgataa atttacacga
     1201 aaagatatac aatcgggtgt tgctatagcg aaaaagaacc tcactgaagt gaatcatact
     1261 atcgaaagaa caaatgaaga gattatgtgt ttgaaatcgg ctgaaaagtc tttattaatt
     1321 gagctcgaga gcgaaaaaca agttttaacg aatgatagga aacaaatgag gttaggaacg
     1381 ggggccgtag tgaaccttga atcggattta caacgttcac gattagagct cgataatatt
     1441 agaaaaaaag aaaaagaagc tcgagaaaag ctcgttgaac tcccgaaacg attacagaaa
     1501 gtaagtgagg aaaccgagaa tgcaaaattg ttagccgaag gagctagttt agtgctaaaa
     1561 agggcgaaag aaggacttga gcgagcgaaa acaggagtga gttcagtatc gagtcgactc
     1621 gatgaaattc agaagaagat cgaagctgca cgggctaaag aaaagttggc cttgggagcc
     1681 attagcgcac tccacgagtc agctcgtggg tcaaaaagag aagacccgaa aggtggggtc
     1741 aggatatcgt taggggaata ttatgattta agtaaacggg cccacgaggc tcaagaagcg
     1801 ggtgataaac gagtggctga cgccatggct atgattgatg aagctaaaga ttcggaaatg
     1861 cagagtttga ataaacttac acagctcaat tctgaattgg ctgcacgaaa ggaagctttg
     1921 aatgttgcgt tacaaaaggc aaaaatggct aaagagtgta agttgaattt cgaagaagaa
     1981 cttaaaataa gaaagggtga aaatgactcg aaccaagaga gtgagagttg gggaggttcg
     2041 tttcatgcat tgagccgaaa agcaagtgaa aaggtgaacc atgattcatc atcacataac
     2101 tcgggtgcat cgggtgataa taagtctaat acgaagagta gtgagcccga aaatgattcg
     2161 tcacatgatg taaaaggttt atttaaggat aagaagaaga agaagatgag ggtgattatg
     2221 ccaatgtttt cgttaatgac gacggggaaa tggatttttc acaaaaagga taattcgtag
//
LOCUS       XM_071830780            2178 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840517), mRNA.
ACCESSION   XM_071830780
VERSION     XM_071830780.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2178
                     /gene="LOC139840517"
                     /note="uncharacterized LOC139840517; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840517"
     CDS             1..2178
                     /gene="LOC139840517"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686881.1"
                     /db_xref="GeneID:139840517"
                     /translation="MHLSIENLVVTVVFYAREIINEKREDAREIINEKRENEKREADG
                     MAKKNKNRVLYITEEDRDKKVVYADIDKDNVELMQKSLLGEVKKLEYLEQFGEICAAE
                     GLDRFTIKYLGGFTLLLTFENSATATKIVEDKNHFIHSWLNEVKLWDKLHRNAGRLTW
                     LSVVGVPKECWNIKTFKSIVFWWGPAIDTFNCEFKGNQSLIIGKVLVHTKCHERINGQ
                     VKVIVDNKEVYVQVVEETDDIVEIEMEVEKPSNWDDERKSVENLSDGESFMNDGGSLK
                     NILDEEEEAHSGESDYDSDDFNVNNLDRNLEREFNNHSDGDDEVYGYRNPPVSGDNSN
                     SQMHVGKTKSRLSSGNSRRMETGQTFSDNFEVTHIPRVMVHNPFEVLAPNLNPNNDVD
                     ITYPNNDVDSPNRFNISLNPPAINANHKPTSPRPITTSPTQEIPCNTHRRPTTPIQSP
                     SPLQPLNLNKPNSPKSHNRPTTPIQLSSPTQNILNERNHQTTHNTSPTITPTHIFEPT
                     KKLSTPQLNSGKPIDPSPSPDQNSKSPIPIPKPQSPIIPSTGDTSYHKVPSQYPNPID
                     NNTPTQSSIPDTFVVDESQNLDVTEKLVKSKTATKQTPIHLKPSNHSLPNFKHTDRPK
                     PKKSNTTTGTSHQSKSTTGPTPKWSGTSKILQFKHLARSAHKKRPQIKTKKSRPPLVQ
                     SVNNKSKSNNTSKTHKVGSNTSSTSVDFKELGEKIGVKWTVKY"
     misc_feature    <316..621
                     /gene="LOC139840517"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
     misc_feature    <640..912
                     /gene="LOC139840517"
                     /note="Nuclear protein with HMG-like acidic region
                     [General function prediction only]; Region: MAK16;
                     COG5129"
                     /db_xref="CDD:227458"
     misc_feature    <1270..2037
                     /gene="LOC139840517"
                     /note="104 kDa microneme/rhoptry antigen; Provisional;
                     Region: PTZ00449"
                     /db_xref="CDD:185628"
ORIGIN      
        1 atgcatctat ccatagaaaa cttggtagtc actgtcgtgt tttatgcaag agaaataata
       61 aacgaaaaaa gagaagatgc cagagaaata ataaacgaaa agagagaaaa cgaaaagaga
      121 gaagcagatg ggatggcaaa aaagaacaaa aaccgggttc tctacatcac agaagaagac
      181 agggacaaaa aggtagttta tgctgatata gataaagata acgtcgaact aatgcaaaag
      241 tcactgctcg gagaagtcaa gaaattggag tatctagaac aattcgggga aatatgtgcg
      301 gctgaaggac ttgataggtt caccatcaaa taccttggtg gtttcacttt attgttaacg
      361 ttcgaaaatt ctgcaactgc taccaaaatt gtagaagaca aaaaccattt tatccactct
      421 tggttaaatg aagtcaaatt atgggacaaa ttgcatagga acgctggaag attaacatgg
      481 ttgagtgtgg taggggtccc aaaagaatgc tggaacatca aaacattcaa gtctatcgtt
      541 ttctggtggg ggccagcaat tgacactttc aattgtgaat tcaaaggaaa ccaaagtctg
      601 attataggca aagtcctagt tcacactaaa tgccacgaaa gaatcaatgg acaggttaaa
      661 gttattgtcg acaacaaaga ggtttacgtt caagtggtgg aagaaacaga tgatatagtg
      721 gaaatagaga tggaggttga aaagccctca aactgggatg atgaaagaaa gtcagtcgag
      781 aatttgtcag acggcgaatc ctttatgaac gatggtggat ccttaaaaaa tatccttgat
      841 gaggaagaag aagctcattc aggagaaagt gattatgatt cagatgattt taatgttaac
      901 aatcttgatc ggaacttaga acgcgaattc aacaatcata gtgatggtga tgatgaagtc
      961 tacggctacc ggaatccccc agtttccggt gataattcaa acagtcagat gcacgttggg
     1021 aaaacaaaaa gtcgcctttc ctcgggtaac tcaaggcgca tggaaactgg tcagacattc
     1081 tctgacaatt tcgaggtaac acatattccc agagtcatgg tacacaaccc tttcgaggta
     1141 ttagccccaa acctaaaccc taataatgac gtggacataa cctaccctaa taatgatgtg
     1201 gactcaccca accgttttaa tatttcctta aatccaccgg caattaatgc caaccataaa
     1261 cccacttcac ccaggcccat cacaacaagc ccaacccaag aaatcccttg caacactcat
     1321 cgaaggccca ccacccccat acaatcccca agcccattac aacccctcaa cctaaacaaa
     1381 cccaattcac ccaaatctca caatcgccca accaccccca ttcaactttc aagcccaaca
     1441 caaaacatcc taaatgagcg caaccatcaa acaactcata acactagccc aacaattacc
     1501 cccacacata tctttgaacc cacaaaaaaa ctttccactc cacagctcaa ttcgggtaaa
     1561 cctatcgatc catctccatc cccagatcaa aactcaaaat cgcctatccc tatccctaaa
     1621 ccacaatccc caatcattcc ttctaccgga gatacttcat atcacaaagt tccatctcaa
     1681 tacccaaatc ctatcgataa caatacacca acacagtcat ctattcctga taccttcgtt
     1741 gttgatgaat cccaaaatct cgatgttaca gaaaaactcg tcaaatctaa aaccgctacg
     1801 aaacaaactc ccatccacct caaaccctcc aaccattcac taccaaattt caaacacacc
     1861 gacagaccta aaccaaagaa atccaacacc acaacaggaa cctcacacca atctaaaagc
     1921 acgactggtc caactccaaa gtggtcagga acatcaaaaa ttcttcagtt caaacaccta
     1981 gctcgtagtg ctcacaagaa acggcctcag atcaagacaa agaaaagtag acccccattg
     2041 gtacaatcag ttaataataa atcgaaatca aataacacct ccaaaacgca caaagttggt
     2101 tcaaacacat catctacaag cgtcgatttc aaagaattgg gggagaagat tggggtcaaa
     2161 tggacagtta aatattaa
//
LOCUS       XM_071830782            1638 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides replication protein A 70 kDa
            DNA-binding subunit D-like (LOC139840518), mRNA.
ACCESSION   XM_071830782
VERSION     XM_071830782.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1638
                     /gene="LOC139840518"
                     /note="replication protein A 70 kDa DNA-binding subunit
                     D-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139840518"
     CDS             1..1638
                     /gene="LOC139840518"
                     /codon_start=1
                     /product="replication protein A 70 kDa DNA-binding subunit
                     D-like"
                     /protein_id="XP_071686883.1"
                     /db_xref="GeneID:139840518"
                     /translation="MNQEAELVPISTLRPGQRMKIIEAMVYRLWIAKRPRETRPHGYS
                     CILLDIEGNAIQANIAWRNRNRFMQILQVNRAYRMSNFVCTSSEKIDQAISNPTSLAI
                     GLETRIENIPAVGYPSHFFEFTPHTHLQLYTVTDYIRCIQHVGDIQESRGKRGELILR
                     RSINIVNLSEKTIEFTLWNDMATSFDKEAYDTMPKPVMIAIDSCWVKENIVTNEKQLS
                     GISATHYYLNPKIDEYHQQIEEFRKKFASQPLLQPERIQYSEPEVEKYADKYLLAEIL
                     QFNPTAYKGRSFKFEGTICTIVPNNNWFYYECPSCTRSMRGNPPDLQCPDHVTEGNCL
                     FCYSFKATVMDDTASTILTFFSKSADALVGIDCKTMVTTLGHDNKKEIPPQIKQLEGT
                     HHIIEITIGTDKYGEPSYVFKRHFPTAAAPSPSGNKIRQQSNLDNTKKNVYSQTVTSA
                     TNYYTTMLGKKQEESSSQLQEPLPPTPAKEQEENRTDHVKIPTPPGKNQQEASNQSQT
                     PIPPTPAKEQEQKTTRTDTKRSLTPTPEQEMPKKKKD"
     misc_feature    <19..1227
                     /gene="LOC139840518"
                     /note="replication factor-a protein 1 (rpa1); Region:
                     rpa1; TIGR00617"
                     /db_xref="CDD:273177"
     misc_feature    1291..>1626
                     /gene="LOC139840518"
                     /note="superantigen-like protein SSL3; Reviewed; Region:
                     PRK13335"
                     /db_xref="CDD:139494"
ORIGIN      
        1 atgaatcaag aagcggagct ggtaccaatc tcaacattac gcccaggtca gagaatgaaa
       61 atcatagagg caatggtgta cagattatgg atagcgaaac gtcccagaga aactaggcct
      121 cacggatact cttgcatact acttgacatt gagggtaatg caattcaagc taatatagcc
      181 tggagaaaca gaaatcgctt catgcaaatt ctccaagtaa atagagctta cagaatgtct
      241 aacttcgtat gtacatcatc ggaaaaaata gaccaagcaa tatccaaccc tacatcacta
      301 gctatcggtc ttgaaacccg tatcgaaaac atcccagccg ttggctaccc atcacatttc
      361 tttgaattta ctccccacac gcatctgcaa ctatatacag ttacagacta tattagatgc
      421 atacaacacg taggagacat tcaagaaagt cgtgggaaaa gaggagagct aattctgcgc
      481 cgttccatca acatcgtcaa tctcagcgaa aaaacaatcg aatttacatt atggaacgat
      541 atggcaacaa gttttgacaa ggaagcgtac gatacaatgc caaaaccagt catgatagca
      601 atcgattctt gctgggtaaa agagaacata gtcaccaacg aaaaacaact ctcaggaata
      661 tcagcaacac attactatct gaatccgaaa attgacgagt atcatcaaca aattgaagaa
      721 ttcagaaaga aatttgcgag tcagcccctt ctccagccag aacgcattca gtacagtgag
      781 cccgaggtcg aaaaatatgc agataaatac cttctggcag aaatacttca gtttaatcca
      841 accgcttaca agggacgatc attcaagttc gagggaacga tctgcacaat agttccaaat
      901 aataattggt tctattacga atgtccgtca tgcacaagat caatgcgcgg aaatccacca
      961 gatctacaat gcccggatca cgtaaccgaa ggcaactgtc ttttctgtta ttcattcaaa
     1021 gcaacggtga tggacgacac tgcatcaaca attctcacgt tcttctcaaa atcggctgac
     1081 gcattggtag gtatcgactg caaaaccatg gtaacaacac tgggacacga caacaaaaaa
     1141 gagataccgc ctcaaataaa acaattagaa ggtacgcacc acattattga gatcaccatc
     1201 ggcaccgaca aatacggaga acccagctac gtcttcaaac gccacttccc aactgcagca
     1261 gctccatctc catcaggtaa caaaattaga caacaatcca accttgacaa tacgaaaaaa
     1321 aacgtgtatt cacaaacagt aacatcagca actaattact ataccacaat gctaggaaaa
     1381 aaacaagaag aaagcagcag ccaacttcag gaaccactcc ctccaactcc agcaaaagaa
     1441 caggaagaaa acagaacaga ccacgtaaaa attccaacac caccagggaa aaatcaacaa
     1501 gaagccagca accagagtca gacaccgatc cctccaaccc cagcaaaaga acaagaacaa
     1561 aagacaaccc gcacggacac taaaagatca ctcactccca caccagaaca agaaatgcca
     1621 aaaaagaaaa aagactag
//
LOCUS       XM_071830783            1281 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840519), mRNA.
ACCESSION   XM_071830783
VERSION     XM_071830783.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1281
                     /gene="LOC139840519"
                     /note="uncharacterized LOC139840519; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840519"
     CDS             1..1281
                     /gene="LOC139840519"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686884.1"
                     /db_xref="GeneID:139840519"
                     /translation="MSDDIPLRVAASFHMSKIYINPSELESYVLYELQILLHQQSKSV
                     SDFGLPKIPQHLLDDLQNRLIMEEKNFDREALIAEKLILESKMNDKQQMIYNMVISSN
                     SSKKQELIFVYGHGGTGKTFLWKAITTALRAEGKIVLAVASSGIASLLLSFDQTAYSR
                     FKIPLDLTDESMCNIKKQTNMASLLKKTEMIIWDEVPMNDRKCLEALDRTLRDIYDIL
                     EVPFGGLTFVLGGDFRQTLPLKKGCGKQKENVANFAEWLLQIGNGSVGIPDKSDLHNV
                     SWIEIPEKFCIQHTKESLQQLISFIYDEELLRNPDAMKLQQQAIICPKNETVDIINNM
                     IMRKKEGQQKTYTSCDSATPYSNDGGQTELLYPTEYLNCQNFPGLPPHELSLKIGVPI
                     ILLRNLNVAGGLCNGTRMIVTQLLSNLIEGEIIT"
     misc_feature    259..1245
                     /gene="LOC139840519"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(346..366,580..582)
                     /gene="LOC139840519"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgtctgatg acataccact tagagttgca gcctccttcc atatgtcaaa gatatacata
       61 aatccatcag aattggaaag ttatgtgctg tacgaattac aaattttact gcaccagcaa
      121 tcgaagagtg tttccgactt tggcctaccc aaaattcctc aacaccttct agatgatctt
      181 caaaacagac tcatcatgga ggagaaaaat tttgatcgtg aagcgttaat tgcagaaaaa
      241 ctgattcttg aatcaaagat gaatgataaa caacaaatga tatacaacat ggtcatcagc
      301 tcaaatagca gcaaaaaaca agaacttata ttcgtttatg gccacggtgg aacagggaaa
      361 acctttctct ggaaagcaat cacaactgca ctacgagccg aagggaaaat agtactcgca
      421 gtagcatcat ccggtatagc ttccctgcta ttatctttcg atcagactgc atactcgagg
      481 ttcaaaattc ctcttgattt gacagacgag agtatgtgca acattaagaa acaaacgaac
      541 atggcgtcac tacttaaaaa aacggagatg ataatttggg atgaagttcc aatgaatgac
      601 cgaaagtgtt tggaagctct cgatagaaca ctcagagata tctacgatat cctcgaagtt
      661 cctttcggtg ggctaacctt cgtattaggt ggtgactttc gtcaaacatt accgcttaag
      721 aaaggatgcg ggaaacaaaa agaaaatgtc gcaaattttg cggaatggtt attgcaaatc
      781 ggaaatggta gtgttggcat ccctgacaag tcagacctcc ataacgtctc ttggatagaa
      841 attccagaaa aattttgtat tcaacatacc aaagagagtc tccagcaact tatatcgttc
      901 atctacgacg aagagctgct gcgcaatcca gatgcaatga agctacaaca gcaagcaata
      961 atttgtccga aaaatgaaac ggtagatatc attaacaaca tgatcatgag aaagaaagaa
     1021 ggtcaacaga aaacgtatac gagctgcgat tctgcaactc catatagtaa cgatggcggg
     1081 cagaccgagt tactatatcc gaccgaatat ctaaactgtc aaaactttcc agggcttcca
     1141 cctcatgaac tatcgctaaa aatcggtgtt cccataattc tactaagaaa tttgaatgtc
     1201 gccggaggtt tatgcaatgg aacaaggatg atagtaacac aactactatc aaatcttatc
     1261 gaaggcgaaa tcatcacatg a
//
LOCUS       XM_071830784            2514 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840520), mRNA.
ACCESSION   XM_071830784
VERSION     XM_071830784.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2514
                     /gene="LOC139840520"
                     /note="uncharacterized LOC139840520; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139840520"
     CDS             1..2514
                     /gene="LOC139840520"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686885.1"
                     /db_xref="GeneID:139840520"
                     /translation="MSPKKRTNQLPDSAIPSSSDGVINNMELNPSKKRKKVINKLHVG
                     DGNPTNISACVSSSTTLRTGSCDDIALPLTASRSHTAGIRFDVGFNQLTSGSNDTEGV
                     TNEYDDISDCNCVCSFCGATFWYEERLKISSSSLRFNHSCEGGRVDLPREEEPPAIFA
                     QLLGTKNYVDNIRAYNQMFSMASYGAHIDDTINNSRGPYVFKISGQVYHWVGSLCPED
                     GDPPRFLQLYIYDTVNEIRNRMRFFGGDRSDVLKAEIVRQLIEVLNAKNELVKLFRTA
                     RDRIESNDIPNLRIRLYNFIGTRQHEMPTSDAIGAVIFESGDRTKTDYDMIIEYKGGT
                     PKRVNKLHPSYMSLQFPLLFVYGQSGYHPGLKLRNIHGGGGRRKDKMTMNMFYTYQLH
                     DRYNTFGLLSKCGRLFQQYVVIAYCIIEMDRLDYVKNNQQNIRNEYLTELYDAINRGD
                     YYGADVGSRTILPASFTGGPRYMYSHYLDALAICRVHGNPRFFITFTCNTRWPKIRRY
                     MRKYPGLTSTDRADIVVRIFSMKLKQFITVLKEEELFGPYGSVLYTIEFQKRGLPHCH
                     TLLWIKSTRKSYEPEDVDRFISAELPDPIRDPNGFKVVSEMMMHGPCGSLNDKAPCME
                     QTMQGSVCSKKFPKPFNESTYFDSEGFIHYRRRNLGVSADKGTCRLDNGYVVSYNRAL
                     CLRFHAHINVEWCGWTMLIKYLFKYISKWTDRISVHIPKPVGEHTSADTEQNPNVDEI
                     KNFVDARFICPYEACWRIFNFPIHYREPAVQVLAVHLKDMQLVKFRSTQRLKSVVNNP
                     VQKKTTLTEWLFYNRHSDDGKHLTYLDFPLEFVWVDNEK"
     misc_feature    1210..1707
                     /gene="LOC139840520"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgtcgccta aaaaacgaac taaccaacta cctgattctg ctataccatc ctcttctgat
       61 ggtgtaatta ataatatgga attaaatcct tctaaaaaaa ggaagaaagt aattaataaa
      121 ttacatgttg gagatggtaa tccgactaac ataagtgcct gtgtgagttc ttcaactaca
      181 cttcgaaccg gttcctgtga tgatattgcc ttaccattga cagcttcacg ttcacacaca
      241 gctgggatac gttttgacgt tggtttcaat cagttgactt ccggttcaaa cgatacagaa
      301 ggtgtaacaa acgagtatga cgacatcagt gactgcaatt gtgtttgttc tttctgtggt
      361 gctacttttt ggtatgaaga aagactaaaa atctcttcaa gtagtttaag gtttaaccat
      421 agttgtgaag ggggtcgtgt tgatctgcca cgtgaagagg aacctcccgc tatttttgcg
      481 cagctcttag gcaccaagaa ttatgttgac aatattcgcg catataatca gatgtttagc
      541 atggcttcat atggggctca tatcgatgat actatcaata acagtagggg gccctatgta
      601 tttaagattt cgggccaagt ttatcattgg gtggggtcgc tatgcccaga agacggtgat
      661 cctccccgtt ttttacaact gtatatatat gatactgtta atgaaatccg aaatagaatg
      721 agattttttg gtggagatag atccgatgtt ctcaaagctg aaatcgttag gcagttaata
      781 gaggtattga atgctaagaa tgaattagtt aagttgttta ggactgcgag ggatagaatc
      841 gagtcaaatg atatccctaa tttacgtata aggctctaca acttcattgg tacacgacaa
      901 catgagatgc ctaccagtga tgcaattggt gctgttatat ttgagtcggg tgatagaact
      961 aaaaccgact atgatatgat catagagtat aaaggtggta caccaaaacg tgtaaacaag
     1021 ctgcatccat cttatatgtc attacaattc ccactactgt ttgtgtatgg tcaatcaggg
     1081 taccatccgg gtttaaaact aagaaatatt catggaggtg gtggtagaag aaaagacaaa
     1141 atgaccatga acatgttcta tacttatcaa ctacacgata ggtataatac atttggtttg
     1201 ttatctaaat gcggaaggtt atttcagcaa tatgtagtta tcgcttattg tatcatagaa
     1261 atggataggc tcgactacgt taaaaataat cagcagaaca tacgcaacga atatttaacc
     1321 gagttgtatg atgccataaa taggggtgat tactatggtg ctgatgttgg ttcgagaact
     1381 atattacccg catcatttac aggcggtcct agatacatgt atagtcatta cctagacgcg
     1441 cttgccatat gtcgtgtgca tggtaatcct aggtttttca ttacgttcac ctgtaacact
     1501 agatggccga aaatcagaag gtatatgcgc aaatatcccg gtctcacttc cactgatcgt
     1561 gcagatatag ttgttcggat ctttagtatg aaactgaagc agtttattac cgtcctgaaa
     1621 gaagaagaat tgtttggtcc gtacggatct gtcctttaca cgatagagtt tcagaaaagg
     1681 gggcttccgc attgtcatac attattatgg attaaatcaa cacggaaatc ctatgaacca
     1741 gaagatgtag accgctttat ttcagctgaa ttgcctgacc ccattagaga tcctaatggt
     1801 ttcaaagtcg tttctgagat gatgatgcac ggtccttgcg gttcattaaa tgataaagca
     1861 ccatgtatgg aacaaaccat gcaaggatct gtttgttcta agaaatttcc gaaaccattc
     1921 aatgaaagca cgtattttga tagtgaaggt tttattcatt accgaagacg taatctgggt
     1981 gtttcggccg ataaaggtac ctgcagactt gataatggtt atgtggtatc atacaaccgt
     2041 gcattatgtt tgcggtttca tgcacacatt aatgttgaat ggtgtggctg gacgatgctt
     2101 atcaagtatt tatttaaata catctcaaaa tggacggatc gtatttccgt tcacattccc
     2161 aaacctgtcg gcgagcatac atcagccgat accgaacaga acccgaatgt tgatgaaata
     2221 aagaattttg ttgatgcgcg gtttatctgt ccatatgaag catgttggcg aatattcaat
     2281 tttccaattc attatcgcga accagctgtc caagtactcg ctgtccactt gaaagatatg
     2341 cagttagtga aatttcgctc tacacagcgc ctaaagtcag ttgtcaacaa tccagttcaa
     2401 aagaaaacaa cgttaacaga atggctattt tacaatagac attctgatga cggaaagcat
     2461 cttacctacc tagatttccc acttgaattt gtctgggtag ataatgaaaa atga
//
LOCUS       XM_071830785            1998 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840522), mRNA.
ACCESSION   XM_071830785
VERSION     XM_071830785.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1998
                     /gene="LOC139840522"
                     /note="uncharacterized LOC139840522; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840522"
     CDS             1..1998
                     /gene="LOC139840522"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686886.1"
                     /db_xref="GeneID:139840522"
                     /translation="MVVDFKERQVPKSTHLVINGLILVVAFYLEVPEQSLGGRTPATL
                     PECKIDSGRRDGHVRSCPSYLGAVRSRGFRVGNRLANPVKIRVGSWNVGSLTGKSYEL
                     VETLHKSKVDILCVQETRWKGQEAVDIDDYRLWFSGSKVARNGVGVILGHPYKDNIVG
                     VGRVSDRIMSIRLVIQEGTYMVISAYAPHAGLGEDEKRSFWDSLDEVVRSCPADHRLL
                     IGGDLNGHIGTDSEGYTGVHGGFGYGVRNEEGRSILDFAVAHDLVVANSFFRKTEAQL
                     ATFHSGGHSTQIDYLLLRKGELRACRDCRVLTTWTCSTQHRLLVMDLALQRRATRSAR
                     PVQPRILWKNLNGVKAETFKALVLERVEAGVEIATHGDADQMWNSLASTIRDVAKEAL
                     GVVVGTSRGHKPGRESWWISDEVQTKIALKQLRFRELITCREGTLEDRTRAEERYKEA
                     KREAKKAVARAKDKAYEDLYKKLDSKEGANDIYRIAKAREHRRRDIDNIKFIKDESGH
                     TIVKEDEIRKRWEWYFSSLFVGGGPGRQEDPRDSGIGQFQNNSFCRRIRHEEVRLALR
                     KMGRNKAVGPDQIPIEAWRCLGEDGVRWLTCLFNKTFRSYKMPIEWRRSEIIPIFKNK
                     GDAQICGSYRGIKLLSHTMKLWERVFGRNLRVFGQNVEVLG"
     misc_feature    259..969
                     /gene="LOC139840522"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(271..273,352..354,556..558,664..666,670..672,
                     865..867,943..948)
                     /gene="LOC139840522"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(352..354,943..945)
                     /gene="LOC139840522"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(556..558,670..672,946..948)
                     /gene="LOC139840522"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    1840..>1965
                     /gene="LOC139840522"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggtggttg actttaagga acgacaggtg ccaaagtcaa ctcatttagt tattaatggt
       61 ttgattctag ttgtggcatt ttacctggag gtacccgaac agtcgctggg aggacgaacg
      121 ccggcaactc tgccggaatg caagatagac tcgggtcgta gagatggtca cgtgaggtca
      181 tgtccttctt acttaggggc ggttagatct agagggttta gagttggcaa taggttagcg
      241 aacccggtta agattagagt aggtagttgg aatgtaggat ctttgactgg caaatcctat
      301 gagcttgttg agaccttaca taaaagtaaa gtggatattt tgtgtgttca agaaaccaga
      361 tggaagggtc aagaggcggt tgacattgac gactataggt tgtggttttc gggttccaag
      421 gtagctagaa acggggtagg agtcatttta ggacatccgt ataaggataa tattgtgggc
      481 gtaggtagag ttagtgatag gattatgtca ataagattag ttatccagga agggacttac
      541 atggtcatta gcgcttatgc acctcacgct ggtttgggtg aagatgaaaa aagaagcttt
      601 tgggattcgt tagatgaagt cgtgaggagt tgccccgctg accatcgctt acttattggg
      661 ggtgacctta atggtcatat aggcacggat tcagaaggat atacgggtgt ccatgggggc
      721 tttgggtacg gagttcgaaa tgaagaagga cgctccattc tcgatttcgc tgttgcccat
      781 gatttggttg ttgcaaactc tttcttcagg aagacggaag ctcaactagc tactttccac
      841 agtgggggcc atagtaccca gattgactat ttgctgcttc gcaaagggga gcttagggct
      901 tgcagagact gtagagttct gaccacctgg acctgttcca cccaacatag attattggtc
      961 atggacctgg ccctgcagag acgggctacc aggagcgcga gacccgtcca acctaggatc
     1021 ctatggaaga atctaaatgg agtgaaagcc gaaactttta aagctttggt tttggaaaga
     1081 gtagaggcag gagtggaaat tgctactcat ggtgacgcgg atcagatgtg gaatagtctg
     1141 gcttccacta ttagagatgt agccaaggaa gccttaggtg tggtagtagg gacatcgcga
     1201 ggacacaaac ctggtagaga atcatggtgg attagcgatg aggtccaaac caaaatcgcg
     1261 cttaagcaac taaggtttag ggagctcatt acttgcaggg agggaacact tgaggataga
     1321 actagggctg aagagagata taaagaagcc aaaagggaag ctaagaaggc tgttgcacgt
     1381 gcaaaagata aagcgtatga agatttgtat aagaaactag actctaaaga aggagctaat
     1441 gatatctaca ggattgcaaa agctagagag cataggagga gggatataga taacatcaag
     1501 tttatcaaag atgaatccgg tcacaccatt gtgaaggaag acgaaataag gaaaagatgg
     1561 gaatggtact tctcatctct tttcgttggt ggaggacccg ggcgccaaga ggacccgcga
     1621 gactcgggta taggacaatt ccagaacaac agtttctgta ggaggatcag gcatgaagaa
     1681 gtaagattgg cactacgaaa gatgggtaga aacaaagctg ttggaccaga ccagatccca
     1741 atagaggcgt ggcggtgcct cggcgaggat ggtgttaggt ggctaacgtg tcttttcaat
     1801 aagacgttta gaagctataa aatgcccata gaatggagac gcagcgagat tatacccatc
     1861 ttcaaaaata aaggggatgc ccaaatctgc ggtagctaca gaggcataaa attacttagt
     1921 cataccatga agctttggga aagggttttt gggcgaaatt tgagagtttt tgggcaaaat
     1981 gtggaggttt tgggttag
//
LOCUS       XM_071830787            1008 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840523), mRNA.
ACCESSION   XM_071830787
VERSION     XM_071830787.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1008
                     /gene="LOC139840523"
                     /note="uncharacterized LOC139840523; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840523"
     CDS             1..1008
                     /gene="LOC139840523"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686888.1"
                     /db_xref="GeneID:139840523"
                     /translation="MRMLSLNIRGFGSGKDSKVGDFKKLVSRKQPDVILLQETKCNCV
                     DRNWVSIIWGSDEFDFIQKEKVGKSGGLLLIWDTNVFVAVESIISDFYVAIKERWKGW
                     DVESIIVNVYGPHEDANKLKLWLSLGSFVGKHDVAWFLGGDFNEVREDSERQNCVFMS
                     KRASWFNDFINESRLLDIPLGGKRFTRICDNGLKFTKLDRFLVSEKSIQAWGDLSTLA
                     LERKLSDHCPLILRDKDIDFGPKRTKIFDEWLDNEGSEEIIKKAWSMNVGGSRLDCVF
                     RNKMKNVKNALKDWSIKSLGKLEEEINDLKNSACHWELIAEQRDLNDNERDNWMNVRK
                     K"
     misc_feature    13..696
                     /gene="LOC139840523"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,112..114,334..336,427..429,433..435,595..597,
                     673..678)
                     /gene="LOC139840523"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(112..114,673..675)
                     /gene="LOC139840523"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(334..336,433..435,676..678)
                     /gene="LOC139840523"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgagaatgc tttctttaaa tattcgtggt ttcgggtcag ggaaagacag taaagttggt
       61 gattttaaaa aattggttag tcgtaaacaa cctgatgtaa ttctactaca agaaaccaag
      121 tgcaattgtg tagatagaaa ttgggtcagt attatatggg ggtcggatga gtttgatttc
      181 attcaaaaag aaaaagtggg taaatcgggc gggcttctcc ttatttggga tactaatgta
      241 tttgtggctg ttgaaagtat aataagtgat ttttatgttg caattaaaga aagatggaaa
      301 gggtgggatg ttgagtcaat tattgtgaat gtttatggtc ctcacgagga tgctaacaaa
      361 ttaaaattgt ggttgagtct tggatctttt gtaggtaaac atgatgttgc ttggttcctt
      421 ggtggagatt tcaatgaagt tcgggaagat tcggagagac aaaattgtgt ctttatgagc
      481 aaaagagcaa gttggttcaa tgattttatt aatgagtcgc ggttattaga catcccgtta
      541 ggaggtaaaa ggtttactag aatttgtgat aatggcctta aatttaccaa gctcgataga
      601 ttcttagtct ccgagaagtc tattcaagct tggggtgatc tttctacttt ggctctcgaa
      661 aggaaacttt cggaccattg tccactaatc cttagagata aagatataga ctttggtccg
      721 aagcgaacga agatttttga cgaatggcta gataatgaag gttcggagga gattatcaaa
      781 aaggcatgga gtatgaatgt cggaggtagt aggcttgatt gtgtttttag gaataaaatg
      841 aaaaatgtaa aaaatgcttt aaaggattgg agcattaagt ctttaggcaa acttgaggag
      901 gagatcaacg atcttaaaaa cagtgcgtgt cattgggaat taatagctga gcaaagagac
      961 ctgaatgata atgaacgtga caattggatg aacgttagaa agaagtga
//
LOCUS       XM_071830788            1211 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fe(2+) transport protein
            2-like (LOC139840524), partial mRNA.
ACCESSION   XM_071830788
VERSION     XM_071830788.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..1211
                     /gene="LOC139840524"
                     /note="fe(2+) transport protein 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840524"
     CDS             <1..612
                     /gene="LOC139840524"
                     /codon_start=1
                     /product="fe(2+) transport protein 2-like"
                     /protein_id="XP_071686889.1"
                     /db_xref="GeneID:139840524"
                     /translation="WVTTCFTVTLPLLSRSVPALQPDTKLFVLVKAIASAVILATGYM
                     HVLLDSFECLTSKYLPEKSCSKFPLTTFIVMLSVVLTLMIDSYAMSGYKKCCKPDQKL
                     KISGHCHGDGSSGPEDTASQLRCYRVVAQVLELRIVVHSIVIGLSMGASNNLCTIKPL
                     VAAVYFHQFFEGMGLSGCILQIIFPSNILFFNEVKIMSSDTFT"
     misc_feature    4..>558
                     /gene="LOC139840524"
                     /note="ZIP Zinc transporter; Region: Zip; cl00437"
                     /db_xref="CDD:444905"
ORIGIN      
        1 tgggttacaa cctgctttac agtcactctt cctttacttt caagatctgt acccgcttta
       61 caacctgata ctaagctatt tgtgttggtt aaagcgattg cttcagctgt gattcttgca
      121 acgggataca tgcatgtatt actggattca tttgaatgtt tgacatccaa atatttgcct
      181 gaaaaatcat gtagtaagtt cccattaaca acgtttatcg tcatgttatc cgttgtattg
      241 acactaatga ttgattcgta tgcgatgagt gggtacaaga aatgctgtaa acccgatcaa
      301 aaattgaaaa tttcgggtca ttgccatggt gatggttcgt ctgggccaga ggacacagcg
      361 tcacagttga gatgctaccg tgtggttgct caggtattag agcttcggat agttgttcat
      421 tcgattgtga ttgggctatc gatgggtgca tcgaataatc tatgcaccat aaaacctctt
      481 gtggctgcag tatattttca tcaatttttt gagggtatgg gcctcagcgg ttgcattctt
      541 cagattattt ttccttcaaa tattttattt tttaatgaag ttaaaattat gagttctgat
      601 acatttactt aaatgattaa agacgaacta tgaaatgaag atgaaagtag cactggtatt
      661 tttcttttca gtgacaacac ccttcgggat agcagttggg atcgggttat caaatgtgta
      721 ccgtgaaaat agtccaacgg cattgatagt agttggagtg ctaaacacag tttcagcagg
      781 gctgtttaat tacatggcac tggtggatct attggcatta gattttatgg ggaaaaagct
      841 gaaagatgac atgaaacttc aagcatttgc atatgttgct gtaaatttag gagctggagg
      901 catttagatt tatttggcaa gcgaacgaag gatcttgagg cagttgatcc tatcataaga
      961 attgtagccg agaaacatcg aactgattac caactcattg gacttttttt tttttgagta
     1021 aagcaactca ttggacttgc cgataggaat gcatggaagg ggtaaagcca tgaacagtta
     1081 tgttttattt caatgaatta tgttatataa tttaaaggtt tttggaactt tacacattgt
     1141 aatattatat gtatccaact ttgaaaggtc gtactgtatg tattcgattt cactttcaat
     1201 ggataaatat c
//
LOCUS       XM_071830789             327 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840525), mRNA.
ACCESSION   XM_071830789
VERSION     XM_071830789.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..327
                     /gene="LOC139840525"
                     /note="uncharacterized LOC139840525; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840525"
     CDS             1..327
                     /gene="LOC139840525"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686890.1"
                     /db_xref="GeneID:139840525"
                     /translation="MDIWNRVFSWWGFGNMSNFTINELIDDNAPRNANKLGKQIWQAV
                     KWVASYLIWSNRNKVVFRGKGWNPPVALNEIQTKSFEWISRRLRDKKLEWMSWLNDPS
                     LYLNCL"
ORIGIN      
        1 atggatattt ggaatcgtgt tttctcatgg tggggatttg gaaacatgtc aaatttcacc
       61 attaacgaat taattgatga taatgctccg agaaatgcaa acaaacttgg gaaacaaata
      121 tggcaagcgg tcaaatgggt cgcttcctac ttgatttggt caaatcggaa taaagtcgtt
      181 tttcgtggaa aaggatggaa tcctccggtc gcgttgaacg aaattcaaac aaaatctttc
      241 gaatggattt cccgaagatt gcgtgataag aagctagagt ggatgtcgtg gcttaatgat
      301 ccgagtttgt atttaaattg cttgtaa
//
LOCUS       XM_071830790            1955 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides wall-associated receptor
            kinase-like 14 (LOC139840526), mRNA.
ACCESSION   XM_071830790
VERSION     XM_071830790.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1955
                     /gene="LOC139840526"
                     /note="wall-associated receptor kinase-like 14; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840526"
     CDS             99..1955
                     /gene="LOC139840526"
                     /codon_start=1
                     /product="wall-associated receptor kinase-like 14"
                     /protein_id="XP_071686891.1"
                     /db_xref="GeneID:139840526"
                     /translation="MIKLHILILILISISIFPSIISQKPYCNKTCPNSILNNLPYPFG
                     FSSGCEIQLNCSQNGIVSIGEFAVEKANDKDGLLVSLPSKCGRNVEALHTLYSENYAP
                     TSENAILMENCTDKIRTCMVPEMMFQPQLQVIDCGGKSDVYGNVSCYSGDTNLPFLDY
                     ENVMMAGCHFLLSGMVVKMVGDNPALSLDVQVVKLGWWLKGDCECSEDAICTKFVSPV
                     NGGDGYKCQCKDGFSGDGYKASSGCRKGSSGCHLFGRCEGNNIVGVFVGVVTIGGSLI
                     ACIGLVCCYARRRTIAASFSKKNRRLCEVKGITIPIYSYKEIEKATNGFSDKQKLGTG
                     AFGTVYKGKIRKGEWVAIKRIKHRYDTDNINQVMNEITLLSTVSHQNLLRLLGCSVEK
                     TDQILIYEFMPNGTLSQHLQREKGNGLPWPVRLTIAAETAQAISHLHSSKPPIYHRDV
                     KSCNILVDYNFKAKVADFGLSRLGMIESSHISTAPQGTPGYLDPQYYEKFHLSDKSDV
                     YSFGVVLTEIITGLKAVDFSRRHSEINLASLAIDRIGKGNLEDIIDPFLKPIKDDSIM
                     NSIHKVAEVAFRCLALDSDMRPPMAEVATELENIRASNFPSWKENIDIVSAQ"
     misc_feature    711..809
                     /gene="LOC139840526"
                     /note="EGF domain; Region: EGF_3; pfam12947"
                     /db_xref="CDD:463759"
     misc_feature    1089..1898
                     /gene="LOC139840526"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1089..1100,1107..1109,1113..1115,1149..1151,
                     1155..1157,1245..1247,1293..1304,1443..1445,1455..1460,
                     1464..1466,1494..1499)
                     /gene="LOC139840526"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 tatttatatt tatacctgct acttatctct gtcatacaga tcaatctcct caatgttcat
       61 tcatttttct ttgtagatcc aaattatttt ccataaagat gataaaatta cacatactca
      121 tcttaattct aatttccatt tccatatttc catcaatcat atctcaaaaa ccatactgta
      181 acaaaacatg tcccaacagc atactaaaca atctcccata tccatttggc ttctcttcag
      241 gctgcgaaat ccaattaaac tgctcacaaa acggcatagt ttcaattggc gaattcgctg
      301 ttgaaaaagc caacgataag gacggattac tagttagcct tccctccaag tgtggacgaa
      361 acgtcgaagc tctccacact ctctacagcg aaaactacgc tccaacttct gaaaacgcga
      421 tcctgatgga aaattgtacg gacaaaatac gtacttgcat ggttcctgaa atgatgtttc
      481 aacctcaact tcaggttatt gattgtggtg gcaaaagtga tgtttatggt aacgtgagtt
      541 gttattctgg tgatacgaat cttccgtttc ttgattatga gaacgtgatg atggctggat
      601 gtcatttttt gctttcgggg atggtggtta agatggttgg agataatccg gctttgtcgt
      661 tagatgttca agtggttaag ttaggatggt ggcttaaagg tgattgtgag tgttcggagg
      721 atgcgatttg tactaagttt gtgtcgccag ttaatggtgg tgatggttat aaatgtcagt
      781 gtaaggatgg tttcagtggt gatggatata aagctagctc cggctgtcga aaaggctcgt
      841 ccggttgtca cttgttcgga cgttgtgaag gaaacaatat agttggagtt tttgttggag
      901 tcgttacaat tggcggctcg ttgatagctt gcataggcct ggtgtgttgc tacgctaggc
      961 gccgtacaat tgcagcatct tttagcaaga aaaatcgaag gctttgtgaa gttaaaggta
     1021 taactattcc aatatactcc tacaaagaaa tcgagaaggc tacaaacggg ttctctgata
     1081 aacaaaaact cggaacaggg gcatttggca cggtctataa aggcaaaatt cgaaaaggcg
     1141 aatgggtagc cattaaaagg attaaacatc gatatgatac cgataatatt aatcaagtca
     1201 tgaatgagat cactcttcta tctacggtta gccaccagaa tcttcttcgc ttgttaggtt
     1261 gttccgttga aaagactgat caaatactaa tatacgagtt catgccaaac gggacgctat
     1321 ctcaacactt gcaaagagaa aaaggtaacg ggcttccttg gcccgttcgt ctcacaattg
     1381 ccgctgaaac tgctcaagcg attagccatc tacattcgtc taaaccacct atttatcatc
     1441 gagacgtaaa gtcttgtaac atattggtgg attataattt taaagcaaaa gtagcggatt
     1501 ttggtctttc gagattggga atgatagaat cgtcgcatat ttcaactgcc ccacaaggga
     1561 cgccgggata tttagatcct caatattacg aaaagtttca tttatctgat aagagtgacg
     1621 tttatagctt tggagtagtg ttgactgaga tcataacggg gttgaaagct gttgactttt
     1681 cacgaagaca tagtgaaatc aatttggcat cactagctat tgacagaata ggaaagggga
     1741 atttagagga tataattgat cctttcctta agccaataaa agacgattcg attatgaact
     1801 cgattcataa ggtagctgag gtggcattta gatgtcttgc gcttgatagc gacatgagac
     1861 ctccaatggc tgaggttgcg accgagctag agaacattag agctagtaac tttccgtcat
     1921 ggaaggagaa tattgatatt gtttcagccc aatga
//
LOCUS       XM_071830791            1153 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            1-acyl-sn-glycerol-3-phosphate acyltransferase 5 (LOC139840528),
            mRNA.
ACCESSION   XM_071830791
VERSION     XM_071830791.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1153
                     /gene="LOC139840528"
                     /note="probable 1-acyl-sn-glycerol-3-phosphate
                     acyltransferase 5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 16 Proteins"
                     /db_xref="GeneID:139840528"
     CDS             23..1153
                     /gene="LOC139840528"
                     /codon_start=1
                     /product="probable 1-acyl-sn-glycerol-3-phosphate
                     acyltransferase 5"
                     /protein_id="XP_071686892.1"
                     /db_xref="GeneID:139840528"
                     /translation="MEDANGGLKSYPLTLPRLIRGLACLVVYLLTAFMFLVYLGTFAA
                     VLLRFFSIHYSRKVTAFVFGLWLALWPFLFEKINNTKVVVSGETVPEKERVLVIANHK
                     TEVDWMYLWDLALRKGCIGCIKYVLKSSLMKLPLFGWGFHVLEFISVERKWEVDETMM
                     KNMLSTLTNPEDPLWLAVFPEGTDFTEQKCIKSQKFAAENGLPILNNVLLPKTRGFHA
                     CLDILRTSLDAVYDVTIAYKNRCPTFLDNVFGVEPAEVHVHVRRIPVNDIPSSQTGCN
                     EWLLQTFHLKDQLLSDFITTGHFPNEGTETELSSIKCLVNCTLVLAITCVLTYLTMFS
                     SIWFKVYVGLACAYLAFATSINYHPSPFLVHVKRLISGKKAM"
     misc_feature    35..1111
                     /gene="LOC139840528"
                     /note="probable 1-acyl-sn-glycerol-3-phosphate
                     acyltransferase; Region: PLN02510"
                     /db_xref="CDD:178126"
ORIGIN      
        1 ttttgttaca gctttaagaa acatggagga tgctaatggt ggattaaaga gctaccctct
       61 aacacttcca aggctcataa gaggtttagc atgtttggtg gtttatcttt taaccgcctt
      121 catgttcttg gtttacttag gcacattcgc tgctgtattg cttcgctttt tcagcataca
      181 ttacagtaga aaagtaacag ctttcgtatt cggtctttgg ctagctttat ggcccttttt
      241 atttgaaaag attaacaaca ctaaagttgt ggtttctgga gaaactgttc cagaaaaaga
      301 acgcgtttta gtgattgcta atcataaaac ggaagtcgac tggatgtacc tttgggatct
      361 tgcattacga aagggctgca ttggatgcat taaatatgtt ctaaagagta gcttgatgaa
      421 attaccgtta tttggttggg ggtttcatgt gttggagttt atttcggttg agagaaaatg
      481 ggaagtagac gaaactatga tgaagaatat gttgtcgact ctgactaatc cagaggaccc
      541 gttgtggctt gctgtttttc ccgaaggaac tgatttcaca gagcaaaagt gcataaaaag
      601 ccaaaagttt gctgctgaaa atggactacc aattctcaac aatgtattgc ttcccaaaac
      661 aagaggtttt catgcttgtt tggatatatt aagaacctct ttagatgcag tgtatgatgt
      721 aacgatagca tacaagaacc ggtgtcccac tttcttggac aatgtttttg gcgtagaacc
      781 agcagaagtt catgttcacg ttcgtcgcat cccagtaaac gatatccctt cttcacaaac
      841 cggatgcaac gagtggttgc tacaaacatt tcatctcaag gatcagttac tttcggattt
      901 cattacaact ggccattttc caaatgaagg aacagaaacc gagctctcaa gtataaaatg
      961 cttggtaaat tgcacacttg ttttagccat cacttgtgta cttacatatc ttacaatgtt
     1021 ctcatctatt tggttcaaag tgtacgttgg cttagcttgt gcgtatctcg ctttcgctac
     1081 aagcattaat tatcatccgt cgccgtttct tgtacatgtc aaacggttga tatctggaaa
     1141 gaaggctatg tag
//
LOCUS       XM_071830792             372 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840529), mRNA.
ACCESSION   XM_071830792
VERSION     XM_071830792.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..372
                     /gene="LOC139840529"
                     /note="uncharacterized LOC139840529; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840529"
     CDS             1..372
                     /gene="LOC139840529"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686893.1"
                     /db_xref="GeneID:139840529"
                     /translation="MEWSWIRQPIGRATDELQDLVNKISLYEFDFRKKDRWRWIHSTD
                     SNLTVRKLSAIVEEKLLPGCDSGQQTLRNNLVPKKGEIFVWRTLKKRLPVLKELDKRG
                     VDLKVYGVQCAIMMLNPLNIL"
ORIGIN      
        1 atggaatgga gctggatcag acaaccaatt ggaagagcaa cggacgaact acaggatctt
       61 gttaacaaaa ttagtttgta tgagtttgat ttcaggaaaa aggatcgctg gaggtggatt
      121 cactcaactg acagcaatct tacggtgaga aaactctcgg ctattgttga agaaaaactc
      181 ctaccagggt gtgattcggg gcaacaaaca ttgcgcaaca accttgttcc aaagaaggga
      241 gaaatttttg tttggagaac actaaaaaag cggttaccgg tattaaaaga actcgacaaa
      301 aggggagttg acctaaaagt gtacggtgtc cagtgtgcga taatgatgtt gaatccattg
      361 aacattctat ga
//
LOCUS       XM_071830793            2166 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840530), mRNA.
ACCESSION   XM_071830793
VERSION     XM_071830793.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2166
                     /gene="LOC139840530"
                     /note="uncharacterized LOC139840530; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840530"
     CDS             1..2166
                     /gene="LOC139840530"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686894.1"
                     /db_xref="GeneID:139840530"
                     /translation="MHLRECTSSHFIWTIQDGVIKRVHNTDSRGRPGLKFNKLEDIFK
                     SADAERKPFPFAERNTRAISGIVEEDVPDCQFNETGLEEMTLSHLRKKCKRKKRKASE
                     SVLMSPKVEDDDPDLSEPLCKFRFKVSKRSPIMEYFECKDTTFMDDNSSKCNPSAESI
                     FDVVTHEKESRERGLFTNDGEICVINEGPVYNSNSEEDLPNVILPMQEFGMDKEEYVC
                     HPLSVVRPLEEDSSLEDLNTSMSDCFHSQQTSEQDGYMCGVQDLESTIDDDDCCEDIG
                     QSTPMPDYLCLPWKSHSWVSSNEHDVDVDVDEHDDDGLSMEVKSPIHDSNFLISDNNS
                     SDSEDVSRFPDRLPLTRKAISPKSKEKLCLAMKYAELSDDVDFYKCKEKLKFEEPNEN
                     EFSSTTSDIKDNESNLQPNQATLLSQNKTFISSKQLHKRSKICKKGYPPQSLPKGCLD
                     GPRLCRSLPRLSTGCTSIQGCSESAIAFSERQMHDIESLASKLMSELNSMKAIVENKL
                     LYEAYHARPLNNEIDEVKSAIKTATKTEETARKWLSMMARDCNRFCKIMKLNQDDNPS
                     ASADPTFLSTDHEKPVSPPLKKERKKISFADESGGTLCDIRVVSHMSITYRTIEGEPN
                     KTLEPHENTRVEPVPKVNRSNDNPDPLKSQGNLSSPNTTIQETVTWNPRRDRSLVGWN
                     DRCKEVSNDLRKCKGDDDEPGKIKREKMLRKEKKVQEHR"
ORIGIN      
        1 atgcatctaa gagaatgcac ctcatctcat tttatctgga ctatacaaga tggtgtgatc
       61 aaaagagttc acaacacgga ttcacgagga agaccaggtc tcaagttcaa taagttggaa
      121 gatatattta aatctgcaga tgctgaacga aaacctttcc catttgcgga gagaaataca
      181 agagcaataa gtggtattgt tgaggaagat gtaccagatt gtcaatttaa tgaaactggt
      241 ttagaggaaa tgacgttatc acatctcagg aaaaagtgta aaagaaagaa aaggaaggct
      301 tctgaatctg ttcttatgtc tccaaaggta gaagatgatg atcctgattt aagcgaaccg
      361 ctgtgtaaat ttagatttaa ggtttcaaaa cgctcaccga tcatggagta ttttgaatgc
      421 aaagacacta catttatgga tgacaattct tcaaaatgta acccatcagc cgagtctata
      481 tttgatgttg taactcatga aaaggagagt agggaacggg gattatttac taatgacggt
      541 gaaatttgtg tcattaatga aggtccagtt tataattcca atagcgagga agatttgcca
      601 aatgttattc tgcctatgca agaatttgga atggacaaag aagaatatgt atgtcatcca
      661 ctttcagttg ttaggcccct agaagaggat tcatctcttg aagatctgaa tacaagcatg
      721 tcggattgct ttcatagtca acagacatcc gagcaagatg gttacatgtg tggtgttcaa
      781 gatttagagt caacaatcga tgatgacgat tgttgtgagg atattgggca gtcaaccccg
      841 atgcctgatt acttgtgctt accttggaag tcacattctt gggtgagctc taatgaacat
      901 gatgttgatg ttgatgttga tgagcatgat gatgatggac tctccatgga ggtaaaatca
      961 cctattcatg attcgaactt cttgatatcc gataacaatt cttctgattc cgaggacgtt
     1021 tcccgatttc ccgacaggct tcctttgaca agaaaggcca tttctccaaa atctaaggaa
     1081 aaattatgtt tggcaatgaa gtatgctgag ttatcagatg atgtggactt ttacaaatgc
     1141 aaggaaaaac taaagtttga ggaaccaaac gagaacgagt tttcatcaac tacatcagat
     1201 atcaaggata acgaatcaaa tctgcagcct aatcaagcca cactattatc tcagaacaaa
     1261 acttttatca gttctaaaca gttgcacaag agatcaaaga tttgtaaaaa aggttatcct
     1321 ccccaaagtc tacctaaagg ttgtcttgat gggccccgtt tatgccgttc gcttcctcgt
     1381 cttagcacag ggtgcacctc gatccaaggg tgttctgaaa gtgctattgc attttcagag
     1441 agacagatgc atgacattga atcacttgca tcgaagctga tgagtgaatt gaactccatg
     1501 aaggccattg ttgaaaataa attgctctat gaagcatatc atgctagacc cctcaataat
     1561 gagatagacg aggtgaaatc agctatcaaa actgcaacca aaactgaaga aacagccaga
     1621 aaatggttat ctatgatggc gagggactgc aatcgtttct gtaaaatcat gaaacttaac
     1681 caagacgata acccatccgc ttctgctgat cctacttttt tgagcacaga tcacgagaaa
     1741 cctgtttctc ctcctcttaa aaaagaaagg aagaaaatca gttttgctga tgaatctggt
     1801 ggaacgcttt gtgatatcag agtagtatca catatgagta ttacgtatag aacaattgaa
     1861 ggcgaaccaa ataaaaccct ggagccacat gaaaacacga gagttgagcc agtgcccaaa
     1921 gtgaaccgtt caaacgacaa tccagaccct ttaaaatctc aaggcaacct atcatctcct
     1981 aataccacaa tccaagaaac cgtcacttgg aacccaagaa gggaccgaag tctagtagga
     2041 tggaatgacc ggtgcaaaga agtatcaaac gacctgagga aatgcaaggg agatgatgat
     2101 gaaccgggaa aaataaagag ggagaagatg ttgaggaagg agaaaaaggt gcaagagcac
     2161 cgctga
//
LOCUS       XM_071830794            1337 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein LPA3 (LOC139840531),
            mRNA.
ACCESSION   XM_071830794
VERSION     XM_071830794.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1337
                     /gene="LOC139840531"
                     /note="protein LPA3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840531"
     CDS             43..1185
                     /gene="LOC139840531"
                     /codon_start=1
                     /product="protein LPA3"
                     /protein_id="XP_071686895.1"
                     /db_xref="GeneID:139840531"
                     /translation="MAMPFSSSLSLSSHTQNHHLHSLFPVHVQFNSSPLSSLINHRCA
                     LNAIRCNSTDNSEPKTASKKLGVSVYKPKSYQVLVTDAANSLAAALDDGKIRLEIDFP
                     PLPTSISSYKGSSDEFSDANVQLVLAVVKKLQENRETRACIVFPDNPEKRRASELFKS
                     AIDLIDGITIGSLDDIPTGPVGSFFRSIRNTLDFDFDDENEASGRWQNDKPPTIFVFI
                     SCSTRELATIETYLENFGTSTPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFVPV
                     FYIRIRDYSKTVAVAPYILNYTGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLNE
                     TKEELLRVLGLKEEQGSQLEFLRRGYKTATWWEEDVELELSSAWRT"
     misc_feature    268..1038
                     /gene="LOC139840531"
                     /note="Domain of unknown function (DUF1995); Region:
                     DUF1995; pfam09353"
                     /db_xref="CDD:430551"
     polyA_site      1337
                     /gene="LOC139840531"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttatatcttt catcatcgtc atctgacacc tcaatttcta aaatggctat gcctttttct
       61 tcttcgttat cactttcatc acacactcaa aatcatcatc ttcattcctt attccctgtg
      121 cacgtacaat tcaattcatc tccattatct tccctcatta atcatagatg tgcactaaat
      181 gcaatcagat gcaacagcac tgacaacagc gaaccaaaaa ctgccagtaa aaaacttgga
      241 gtctcagttt acaaacctaa atcatatcaa gttcttgtta ctgatgctgc taattcactt
      301 gctgctgctc tcgatgacgg caaaattcgt ctcgaaattg attttccgcc attgcctacc
      361 agcatctctt catataaggg atcttcagat gaatttagtg atgccaatgt tcaacttgta
      421 ttggctgttg ttaagaagct tcaagagaat cgagaaacac gagcttgcat tgtctttcct
      481 gacaatccag aaaagcgtag agcttcggag ttattcaaat ctgctattga cttgattgac
      541 gggatcacta ttggttcgtt ggatgatatc ccgactggtc ctgttggttc tttcttcaga
      601 tccatacgga acacactcga ttttgatttt gatgatgaaa atgaagcctc agggaggtgg
      661 cagaatgaca aaccaccaac aatatttgta ttcattagtt gcagcactcg tgaacttgct
      721 accattgaga catatctgga aaattttggt acatcaacac ccgccctcct ttttaatctg
      781 gaacttgaga cattgcgagc tgatcttggc cttcttgggt tcccacccaa agatctgcac
      841 taccgatttc tttctcaatt tgttccagtc ttttatattc gaataagaga ttattctaag
      901 acagtggcag tggcaccata tatcctgaac tacactggag cactctttcg tcaataccct
      961 ggaccatggc aagtgatgct taagcaatct gataattcat atgcttgtgt tgctgaaagt
     1021 gaaactcgat tcactcttaa tgaaacgaaa gaagaactac tgagggtcct tggtttgaag
     1081 gaggaacaag gaagccagct tgagttcctt cgcaggggat acaagactgc tacttggtgg
     1141 gaagaagacg ttgaattgga gttatcttca gcatggcgta cctaagttga accactataa
     1201 aaattacaat gaaaattgga agatagcgtt tcaagcgatg tggttgaaga cctagcccat
     1261 tcgcaatcag tccatacagt ttcatatgta tatcagtaag tacaccatgt atatcagtac
     1321 acaattattc tctttaa
//
LOCUS       XM_071830795            2582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840534), mRNA.
ACCESSION   XM_071830795
VERSION     XM_071830795.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2582
                     /gene="LOC139840534"
                     /note="uncharacterized LOC139840534; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840534"
     CDS             1..2484
                     /gene="LOC139840534"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686896.1"
                     /db_xref="GeneID:139840534"
                     /translation="MESDDDYESSSFINNEPSPSPKHCRLKRLRKSAIEPNQSEAIES
                     VSELPGLPKVDFANLEALESSDIKAFGHDSSPRSLELEDALDNGDDDCRKQKELTSCY
                     DDTDNTCVDINRKESKSDSEFEKGSGGDDDGYDDSSSKKEKELRSCVDDTRVDAELKA
                     NETDLKFEESFDDDDDDVEKKLKTYRKETKRALHFDDDVSENLEATDVKIRVDEVNEF
                     VEDVANEKKRKKKKRTESSGEESKAISVKRMAKERKAHLEQLHAESQRLLRETRGVSF
                     KAVPLVQKPISSILEKIRQRKLEVSKKFSQLDDNVSDKEDDGCVKQDVMDHLKSVETA
                     GGDLSESGKEDKVSSVSNADLEPDGVGMDLPDASIKRKRHDNACSQMALDEESTPVLR
                     APVDDTQELFGSQTSDGKESENEEPSENTSSHEEEMQPSLLAMKLKFDSALDDDISDE
                     EENDKENVAPQFQLHSSPTGDPVKAFVDVEAEEEDDSDNDRMRFGDDDEEEDDDDIEE
                     LNKMIATGYKERPIDLETRNELHQKWLEEKDAAGTDDLLRRLNVTSKLRDASLLDDVE
                     EEEEEEGEDQDQDDVEMNNDAEEDLERPRVGRIDSKTAKELIAQMFTDKDDNYISSDD
                     EEIEKIVVRERLRNKAGDKGKLVSPLEDEDSSEVFGLIKKLNTVPEVRKKAKTTSCFD
                     SMLTGGNSNSSSKSSFLSRASSHTFSSSSKQGRSSGARSFIFGRDDSNSRSSISVSED
                     ISDTTTSREIQTKKVTTKYSSSQVQARSSTQTTKLVTETNSTTSFFEILKNAAVQSSV
                     KKQIHEVEISQSAFAAFKIPKKKPVNPRV"
ORIGIN      
        1 atggaaagcg atgacgatta tgaatcctcc tcttttatta acaacgagcc atcgccgtca
       61 ccgaaacact gtaggctcaa acgcctcagg aaaagcgcaa tcgaaccgaa tcaatcggaa
      121 gcaattgaat cagtaagtga gcttcctggc ttgcctaaag ttgatttcgc taatttagaa
      181 gccctggaat cttctgatat taaagcattc ggtcacgatt caagccctag atcactagaa
      241 ttagaagatg ctttggataa cggtgacgat gattgtagaa aacaaaagga actgacctcg
      301 tgttatgatg atactgataa tacgtgtgtc gatatcaatc ggaaggaaag taaatcagat
      361 tcagaattcg aaaaaggttc tggtggtgat gatgatggtt atgatgatag tagtagtaaa
      421 aaggaaaagg aattgaggtc atgtgttgat gatacacgtg tggatgctga actgaaggca
      481 aatgaaacag atttgaaatt tgaagaaagt tttgatgatg atgatgatga cgtggaaaag
      541 aaattgaaaa catataggaa ggaaacaaag agagcgttgc attttgatga tgatgttagt
      601 gagaatttag aagctacaga tgtgaagatt agggttgatg aggtgaatga atttgttgag
      661 gatgtggcga atgagaaaaa gaggaagaag aagaagagaa ctgagagttc tggtgaggaa
      721 tcaaaagcta tttcagtcaa aagaatggca aaagaaagaa aagctcatct tgagcagctt
      781 catgctgaat ctcagagact tttaagagaa actagaggtg tttcatttaa agcagtccca
      841 cttgtgcaaa agccaatatc atcaattttg gaaaagataa ggcagaggaa gcttgaggtg
      901 tcaaagaagt tttctcagtt ggatgataat gtttcggaca aggaagatga tggatgtgtg
      961 aaacaggatg tgatggatca tttaaagagt gtagaaactg caggtggcga cttatcagag
     1021 tcagggaaag aggacaaagt ttcaagtgtc tcaaatgcag atctagaacc agatggcgtt
     1081 ggtatggatc tacctgatgc gtctattaaa aggaagcgtc atgataatgc ttgttcacaa
     1141 atggctttgg atgaggagtc tacacctgtt cttcgagctc cagttgatga tactcaggaa
     1201 ctttttggtt cccaaacaag cgatggtaag gagtctgaaa atgaggaacc ttctgagaac
     1261 actagtagtc atgaagagga aatgcaacct tctttgctag ctatgaaact gaagtttgat
     1321 tctgcactcg atgatgatat ttctgatgaa gaagaaaatg ataaagagaa tgttgctccc
     1381 caatttcaac tacactcttc tccaactgga gatcctgtaa aagcatttgt tgatgttgaa
     1441 gctgaggaag aagatgatag tgacaatgac cgaatgcgat ttggagatga tgatgaagag
     1501 gaagatgatg atgacattga ggaactcaat aaaatgatag caactggtta taaagaaaga
     1561 ccaatcgact tagaaactcg caatgaactt catcaaaaat ggcttgaaga aaaagatgca
     1621 gctggaactg atgatctttt gagaaggtta aatgtcactt ctaaacttag agatgcatct
     1681 ttacttgatg atgttgaaga agaagaagaa gaagaaggtg aagatcaaga tcaagatgat
     1741 gtagaaatga acaatgacgc tgaagaagat ttagaacgac cccgtgttgg tcgaattgat
     1801 tcaaagacag caaaagaatt gattgctcag atgtttactg ataaagatga taattatata
     1861 tcatctgatg atgaggaaat agagaagatt gtagttagag agcgtctgcg gaacaaagct
     1921 ggagataagg gaaaactagt gtcaccgctt gaggatgagg attcaagtga agtttttggt
     1981 cttataaaaa agctaaatac tgtgcccgag gttcgaaaga aggcaaagac aacttcatgt
     2041 ttcgactcaa tgcttacagg agggaatagc aacagctctt ctaagtcatc tttcttgagt
     2101 agagcatcaa gccatacttt ttcatcttca tccaagcaag gacgctccag tggggcccgg
     2161 tcgtttatat ttggacgaga tgacagcaat agccgaagtt caatctcagt ttctgaggac
     2221 atctccgata ctactacatc aagagaaatc caaacaaaga aggttacaac caagtacagc
     2281 agctcacagg tacaagctag atcaagtacc cagactacaa agctggttac agaaactaat
     2341 agcacgactt cgttcttcga gatactgaag aatgctgctg ttcaatccag tgtcaaaaaa
     2401 cagattcatg aggttgaaat aagccaatca gcatttgcag cttttaaaat cccaaaaaag
     2461 aagcctgtaa atccaagagt atagtaaatt cttcttctag atcaggctag atgatgacta
     2521 tacagatctt tgtggctaat gctcatactc aagaaattaa tatttatagt ctgataagat
     2581 ct
//
LOCUS       XM_071830796             843 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840535), mRNA.
ACCESSION   XM_071830796
VERSION     XM_071830796.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..843
                     /gene="LOC139840535"
                     /note="uncharacterized LOC139840535; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840535"
     CDS             1..843
                     /gene="LOC139840535"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686897.1"
                     /db_xref="GeneID:139840535"
                     /translation="MPTLKEIFPSASNNGPNRPTNKAENSGRMAKWAMELGEYEISFT
                     PRSAVKGQVLADYLAETAGDIEISHESKEIPPPPEQLFPVTNNEAEYEALLSGMRVAK
                     YLEVKEPSVYVDSQLVANQFNGIFEAHDESMQKYLKLVHELAVYFALLQITQVSRTLN
                     KNADVLIEEDEPSWMTPIVEFLNTGTLPIDLTEARKIKMKAPMYLLDKGILYKKSFLG
                     PHLRCLNPTQAESIIREVHKGMCALHSGHKTVVSKIMRLRYYWLSMYRDAAEILAQVK
                     FGNK"
     misc_feature    <244..492
                     /gene="LOC139840535"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    670..822
                     /gene="LOC139840535"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcctacgc ttaaggagat atttccaagc gcatccaata atggtccgaa cagaccaacc
       61 aataaagcag aaaattctgg tcgcatggcc aaatgggcta tggaattagg tgagtacgag
      121 ataagcttca caccaagaag tgcggtaaaa ggacaagtcc tagcagatta cctggctgaa
      181 acagccgggg atatcgaaat ctcgcatgaa tcaaaagaaa taccacctcc gcccgaacag
      241 ctcttccctg taactaataa tgaagctgaa tatgaagcat tgttatctgg aatgcgagta
      301 gcaaaatact tggaagtaaa agaaccgtca gtatatgttg attcacagct agttgcaaat
      361 caattcaatg ggatattcga agcacatgat gaatcgatgc aaaagtatct gaaacttgta
      421 catgaactcg cagtatactt cgctttactc cagataacgc aggtttcaag aacattgaat
      481 aaaaacgcgg atgtgctaat cgaggaagat gagccaagtt ggatgacacc gatagtggaa
      541 ttcttgaaca caggtacatt gccaatagat ttaacagagg caagaaagat taaaatgaaa
      601 gcaccgatgt atttactaga taaaggcatt ctatacaaaa agtctttctt gggacctcat
      661 ttgcggtgtc ttaatccaac tcaagcagag tcaatcatac gagaagtgca caaaggaatg
      721 tgcgctttac actcaggaca caaaacagtt gtgtccaaaa taatgcggct tagatactat
      781 tggctgtcaa tgtacagaga tgccgcggag atattggcac aagtcaaatt tggaaataaa
      841 tag
//
LOCUS       XM_071830798             789 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840536), mRNA.
ACCESSION   XM_071830798
VERSION     XM_071830798.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..789
                     /gene="LOC139840536"
                     /note="uncharacterized LOC139840536; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840536"
     CDS             1..789
                     /gene="LOC139840536"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686899.1"
                     /db_xref="GeneID:139840536"
                     /translation="MVTSGRANQRRKLEFSEEWENTPILFPAIAQEPSDAPITIKGRV
                     KSCEYIIKRLHVDTDCSVDIMYEHYFRLLPGVVRSKLIAPSTALSGFSGESAWPIGII
                     ELELELVDDDNKELVKSTTVEFAVVRSYSKYNALLGRITLQKLAAIPSTVHGLIKFLT
                     PLGTVMIRSEKKDASVAAVEQAKKQPSEEEQLRSCMIIANPRYPEQKIKIGEGLSDET
                     KFKLRNILASNTDVFAWKEADMTGVPREKAEHKLNANPSLTPVR"
ORIGIN      
        1 atggtgacca gcggacgagc aaatcagaga cgcaaattag aattttcaga ggaatgggaa
       61 aacactccca tcctattccc agccatagcg caagaaccct cggatgcgcc tatcacaatt
      121 aaagggcgcg ttaaaagctg tgagtacatc ataaagcgat tgcatgtaga cactgattgc
      181 agtgttgata taatgtatga acattatttc cggttgctgc ctggagtggt acgatccaaa
      241 ctaatagctc ctagcaccgc gttatcaggg ttttccggag agtccgcatg gccaataggg
      301 atcatcgagt tggaattaga gctggtagat gatgataata aggagttagt aaaaagtaca
      361 acagtagaat ttgctgtagt aaggtcttac tcgaaatata atgcgctttt aggacgcata
      421 actttgcaaa agttggcagc tattccttcc acagtgcatg gtcttataaa gttcctaact
      481 ccattaggaa ccgtgatgat aagatcggaa aaaaaagatg caagtgttgc ggctgtagaa
      541 caagccaaaa aacagccaag tgaagaagaa cagctccgaa gctgcatgat tatcgcaaac
      601 ccgcgatatc cagagcaaaa aattaaaatc ggcgagggat tgtctgatga aacaaagttt
      661 aagcttcgca acatattagc ttccaatacg gatgtctttg catggaaaga agcagacatg
      721 actggtgtac caagagaaaa agctgagcat aaacttaatg caaatccaag tctgacaccg
      781 gtacgctaa
//
LOCUS       XM_071830799             399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840537), mRNA.
ACCESSION   XM_071830799
VERSION     XM_071830799.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..399
                     /gene="LOC139840537"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139840537"
     CDS             1..399
                     /gene="LOC139840537"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686900.1"
                     /db_xref="GeneID:139840537"
                     /translation="MIGCKPSRTPVETSAKLTATGPPVADPTLYRSLAGALQYLTFTR
                     PDISYAFQQICLFMHDPHEAHFSALRRIIRYVQGTLDLGLQLFASSTTSLVAYYDTDW
                     AGCPTTHRSTSEYCVFMGNNLLSWSSKRQL"
     misc_feature    283..>393
                     /gene="LOC139840537"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgattggtt gcaaacccag caggacccca gttgaaacca gtgccaaact cacggccact
       61 ggtcctccag ttgccgatcc cactttgtac cgcagtcttg caggtgctct tcagtacctc
      121 acctttacac gcccggatat ttcatatgca tttcagcaaa tttgtttatt tatgcatgat
      181 cctcatgagg ctcacttttc tgctctcaga cggatcatac gatacgttca gggtacttta
      241 gatcttggtc ttcagctatt tgcttcttcc accacctcgc tggtggcata ctatgatact
      301 gattgggcag gctgtcctac tactcaccga tcaacttccg aatattgtgt ttttatgggt
      361 aataatctcc tttcttggtc ttccaagcgc caactgtga
//
LOCUS       XM_071830800            1281 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840538), mRNA.
ACCESSION   XM_071830800
VERSION     XM_071830800.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1281
                     /gene="LOC139840538"
                     /note="uncharacterized LOC139840538; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840538"
     CDS             1..1281
                     /gene="LOC139840538"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686901.1"
                     /db_xref="GeneID:139840538"
                     /translation="MTLIPKKSTPMNLGEYRPISLIGSLYKIIAKVLSKRLQSVIHKV
                     ISVEQSAFMKGRFILDGILVANEVVDEVKRKKDKCMIFKADFEKAFDSINHNFLSKVL
                     ERMGFGLKCRVNSNMVETMASRFGCQVGIFPFMYLGLPIGCKMKNIKDWEPYIEKFHK
                     RLDSWKAKLMSFGGRLTLIKLVLSSLLLYAFSLFHAPSSVINKLEGLRRLFFWGGSGE
                     SKKLSWIICKGDDSLFWHDKWLDGYCLKDKFGRLYNLDRNKDALVMNRWFKDEFGNIM
                     FSWEWSRNSRGRMAGEFQNLSNLVHGFRFTDGTRDKWSCNLFQNGSFTVLHLSKMIDE
                     KLLGPRIGAECTDRVNIIPKKIGLLVWRAKQNRIPVRIELDKRGIDLDSVRCPVCTKK
                     LKRWSIFSFSVTSRRIYGPECLDGGTCLVYHTQT"
     misc_feature    4..>306
                     /gene="LOC139840538"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    <1048..>1167
                     /gene="LOC139840538"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgacattaa tcccaaagaa atcgacccca atgaaccttg gtgaatatcg ccccataagt
       61 ctaatcggaa gtctttacaa gatcatagcc aaagtactct caaaaagact tcaaagtgta
      121 attcataagg tcataagtgt ggagcaaagc gcgtttatga agggaagatt catcttagat
      181 ggaattctag tggcaaatga agtggttgat gaggttaaaa ggaaaaagga caagtgtatg
      241 atctttaagg ccgattttga aaaagcgttc gatagcatca atcataactt tctctcaaaa
      301 gtcttagaaa gaatgggatt cggtttgaag tgtcgtgtta actcgaacat ggtggagact
      361 atggcgagta gattcgggtg ccaagttgga atattcccgt ttatgtatct aggtcttcct
      421 atcgggtgta aaatgaaaaa tattaaagat tgggagccat acattgaaaa attccataag
      481 aggctcgata gttggaaagc aaagttgatg tcatttgggg gtcgtctaac actcatcaaa
      541 ttggtcctta gtagcctcct gttgtatgct ttctctcttt tccatgctcc gtcaagcgtc
      601 attaacaagc tcgaaggttt gcgtcgttta tttttttggg gcgggtcggg agagtccaaa
      661 aaactttcgt ggataatttg taaaggtgat gatagtcttt tctggcacga caaatggttg
      721 gatggctatt gccttaaaga taaatttgga aggctataca acttggatcg aaacaaagac
      781 gcgctggtta tgaataggtg gtttaaagat gagtttggga acataatgtt ttcgtgggaa
      841 tggtcgagaa actcgagggg caggatggca ggcgaattcc aaaacctgag caatttggta
      901 cacggattta gattcacaga tggtacgaga gataaatggt cgtgtaacct ttttcaaaat
      961 ggaagcttca cggtactcca tctttcaaaa atgatcgacg agaaactcct tggcccacgt
     1021 ataggggcag aatgcacgga tcgggttaat attatcccta agaaaatcgg gttgctagtg
     1081 tggagggcga agcaaaatag aattccggta agaatcgagc ttgataaaag agggattgat
     1141 ttggattcgg ttagatgtcc cgtatgcaca aagaaattga aacggtggag catattttca
     1201 ttcagtgtga cttcgcgaag gatctatggt cccgagtgtt tagatggtgg aacttgtctc
     1261 gtctaccata cgcaaacatg a
//
LOCUS       XM_071830801             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840539), mRNA.
ACCESSION   XM_071830801
VERSION     XM_071830801.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139840539"
                     /note="uncharacterized LOC139840539; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840539"
     CDS             1..606
                     /gene="LOC139840539"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686902.1"
                     /db_xref="GeneID:139840539"
                     /translation="MSLNIRGFGIGGPDDKVGWVRRLISKEKPSFLALQETRLNIVED
                     RWIHYLWGSTECCFIQLEMVGLAGGQLLIWDTNCFEALDVIRFNVEWVIGVQGKWKDS
                     GEGLNVINVHGPHDDEKKVQLWDELSLKLANNNEAVILCGDFNEVRHGNERFNCEFVE
                     YRARRFNDFISNNCLLDIPMGGRNFTRVSDDGVKFSKLDRF"
     misc_feature    4..603
                     /gene="LOC139840539"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgtcactaa acattagggg ttttggtatt ggggggcctg atgataaagt tggttgggtt
       61 agaagactta ttagtaaaga aaaacctagc tttctagcat tacaagagac acgtttgaat
      121 attgttgagg acagatggat acattacttg tgggggtcga cagaatgttg ctttatccaa
      181 ctagaaatgg tcgggctagc agggggtcaa ttattgatat gggataccaa ttgttttgag
      241 gcgttagatg ttattaggtt caatgtagag tgggtgatag gtgtacaagg taaatggaaa
      301 gattcgggtg aaggtttgaa tgttattaat gtacacgggc cacacgatga tgaaaagaaa
      361 gttcaattat gggatgagtt gtcacttaag ctagcaaata ataatgaagc tgttattctt
      421 tgtggtgatt ttaatgaagt gcgacacggg aatgagagat ttaattgcga gtttgttgaa
      481 tatagagcta gacgtttcaa tgattttatc tctaataatt gtttgttgga tattccgatg
      541 ggtggtagaa actttacgag ggtaagcgat gatggtgtga agtttagtaa gcttgatcgg
      601 ttttag
//
LOCUS       XM_071830802            1503 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein DETOXIFICATION
            30-like (LOC139840540), mRNA.
ACCESSION   XM_071830802
VERSION     XM_071830802.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1503
                     /gene="LOC139840540"
                     /note="protein DETOXIFICATION 30-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 Proteins"
                     /db_xref="GeneID:139840540"
     CDS             1..1503
                     /gene="LOC139840540"
                     /codon_start=1
                     /product="protein DETOXIFICATION 30-like"
                     /protein_id="XP_071686903.1"
                     /db_xref="GeneID:139840540"
                     /translation="MDSNPNSPLLTSNDAVKNGHFTGDVKDSPPITGVNDFFVQFGIE
                     SKKLWYLAGPAIFTVFCQYSLGAVTQTFAGHVGTLDLAAFSIENSVIGGFSYGIMVGM
                     GSALETLCGQAYGAGQVDMLGIYMQRSWVILFITSLILISAYIFATPLLLFIGQTEEI
                     SHASGKMALWMIPQLFAYAFNHPMAKFLQAQSKIMVMAYISTVTLVLHVFFSWLFMLK
                     LGWGLWGGAIVLNASWWFIVIAQFVYIVSGTCGRAWSGFSCDAFTNLWGFVKLSFASA
                     IMLCLETWYFMALVLFAGYLKNAEIAVDALSICTNILGAAIMLALGFNAAVSVRVSNE
                     LGASHPRTAKFSVVVVTISSFFVGVLLAIILVIFRHEYPSLFSNNLEVQQVVYALTPL
                     LATCLIINNIQPALSGVAIGAGWQAAIAYINIACYYIFGVPLGLALGFAANWGVKGIW
                     IGMLTGTIVQTLILIWICYRTNWDKEASLAVKRIRQWSGKKEVAGEQQKY"
     misc_feature    130..1434
                     /gene="LOC139840540"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; Region: MATE_eukaryotic;
                     cd13132"
                     /db_xref="CDD:240537"
     misc_feature    order(844..846,856..858,940..942,949..951,1186..1188,
                     1198..1200,1279..1281,1357..1359,1369..1371)
                     /gene="LOC139840540"
                     /note="putative cation binding site [ion binding]; other
                     site"
                     /db_xref="CDD:240537"
ORIGIN      
        1 atggatagca acccaaattc gcctcttctg acctctaatg atgccgtaaa aaacggtcat
       61 ttcaccggtg acgtaaaaga tagccctccg ataacaggag taaatgattt ttttgttcaa
      121 tttggaatcg aatcaaaaaa gttatggtac cttgccggac ctgcgatttt cacggttttt
      181 tgtcagtact cacttggtgc tgttactcaa acgttcgcgg gtcatgttgg aactcttgat
      241 ctcgctgcat tctcgatcga aaactcagtc attggcggtt tctcgtatgg aatcatggtt
      301 ggaatgggaa gcgcattaga gacgttatgt gggcaagcat atggagcagg gcaagtagac
      361 atgttaggaa tatacatgca aagatcatgg gttatattat ttatcacaag tctaatttta
      421 atttcggcgt acatatttgc aaccccatta ctccttttta tcggacaaac agaggaaata
      481 tcacacgcgt caggaaagat ggcattatgg atgattccgc agttattcgc ctacgctttt
      541 aatcatccaa tggctaagtt tttgcaagca caaagtaaga taatggtgat ggcttacatt
      601 tctactgtga cattagtcct tcatgtattt ttcagttggt tgtttatgtt gaaactggga
      661 tggggtttat ggggtggagc tatagtgctc aatgcttcgt ggtggtttat tgtgatcgcg
      721 caattcgttt atatagtaag tgggacgtgt ggtcgagctt ggtccgggtt tagttgcgat
      781 gcttttacta atctttgggg atttgttaaa ctatcttttg catcagctat tatgctttgc
      841 ttggaaacat ggtatttcat ggcattggta ctttttgctg gatatttaaa gaatgctgaa
      901 atagcagtgg atgcactctc catatgtaca aacattcttg gggctgcaat tatgttagca
      961 cttggattca atgcagctgt cagcgttcgg gtttcaaacg agttaggagc atctcatcca
     1021 agaaccgcga aattttcagt ggtggtcgta acaatttcat ctttttttgt tggagttttg
     1081 ttggccatta tcctagtcat attccgacat gagtacccat ctttattttc taataatctt
     1141 gaagttcaac aagttgttta cgctcttact ccgttactag caacttgtct cattatcaac
     1201 aatattcaac ctgcactatc tggggtggca attggggcag gatggcaggc agcaattgct
     1261 tatataaata ttgcgtgtta ctacatcttt ggtgttcctt tgggactcgc tctgggattt
     1321 gcagccaact ggggtgtaaa gggtatatgg ataggtatgt taacaggaac tattgtccag
     1381 acattgatct tgatttggat ctgttacaga accaactggg acaaagaggc atccttggca
     1441 gtaaagagaa ttagacaatg gtctggtaaa aaagaggtag ctggagagca acaaaaatat
     1501 taa
//
LOCUS       XM_071830803             425 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sulfite exporter TauE/SafE
            family protein 4-like (LOC139840542), mRNA.
ACCESSION   XM_071830803
VERSION     XM_071830803.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..425
                     /gene="LOC139840542"
                     /note="sulfite exporter TauE/SafE family protein 4-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139840542"
     CDS             1..411
                     /gene="LOC139840542"
                     /codon_start=1
                     /product="sulfite exporter TauE/SafE family protein
                     4-like"
                     /protein_id="XP_071686904.1"
                     /db_xref="GeneID:139840542"
                     /translation="MAKKKTVQSLHTFLEAFAVFGYECVKLYIESKKRKSTGNSESVY
                     EAAIDWTGPHLAFCVFCGILGGIVSRLLGSGGGFIHGPLLFEVGVFLQVKLRAAGVAM
                     RARVDAASMVDGRRGNCHHASSADDGANWAKKRF"
ORIGIN      
        1 atggccaaga agaagacggt acagagctta catacgttcc tagaagcatt tgcagtgttt
       61 gggtacgaat gtgttaagct gtacatagaa agcaagaaga gaaaaagcac agggaactct
      121 gaatcggtat atgaggctgc aattgattgg actggacctc accttgcatt ctgtgtgttt
      181 tgtggaatct taggtggcat cgttagtcgt ctcttggggt ccggtggtgg gttcattcat
      241 ggcccccttt tatttgaagt cggagtcttt ttacaggtga aattgcgggc agcaggtgtg
      301 gcgatgagag cgcgtgttga tgcagcttcg atggttgatg gtcggagggg taattgtcat
      361 catgcttctt cagctgatga tggagcaaat tgggctaaaa aaagattttg aagacaaaat
      421 tacat
//
LOCUS       XM_071830804            1182 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tubby-like F-box protein 5
            (LOC139840543), mRNA.
ACCESSION   XM_071830804
VERSION     XM_071830804.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1182
                     /gene="LOC139840543"
                     /note="tubby-like F-box protein 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840543"
     CDS             1..1182
                     /gene="LOC139840543"
                     /codon_start=1
                     /product="tubby-like F-box protein 5"
                     /protein_id="XP_071686905.1"
                     /db_xref="GeneID:139840543"
                     /translation="MPLIKCLVGEASTKEGGIRNKLRKRNQKKNVISCGRAHIAPVNY
                     DATLAPHLETGAGKWENLPPELLLDIIQRVEAGKTSWPARQDVVACAAVCRLWRDVIK
                     KIVQTPEQCGLLTFPISLKQPGPRGEPIQCFIRRDRAASTYRLYLGLSPALAGDASKL
                     LLAAKKVRKATGTEFLISLAADEFSRTSNTFVGKLSSNFLGTKFVIYDDQPSYDPLIE
                     ANPKFGSKMASLRYSPPLSVRNVTISYEINFLRTKGPRRMHCTMNTIPSSVFQEGGAT
                     PTPLTFPDDECSPYNQTISNKNEEPLILKNKAPRWHEQLQCWCLNFRGRVTVASVKNF
                     QLAVDLPHNGQSMEQQDDVILQFGKIGKDIFTMDYRYPLSTFQALAICLSSFDTKPAC
                     E"
     misc_feature    175..306
                     /gene="LOC139840543"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(184..189,193..201,208..213,220..222,277..285,
                     289..291,298..300)
                     /gene="LOC139840543"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438924"
     misc_feature    order(184..186,196..198,205..210,217..222,256..258,
                     262..267,277..285,289..291)
                     /gene="LOC139840543"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438924"
     misc_feature    361..1164
                     /gene="LOC139840543"
                     /note="Tub family; Region: Tub; pfam01167"
                     /db_xref="CDD:460094"
ORIGIN      
        1 atgccactga tcaaatgtct ggttggagaa gctagtacaa aagaaggcgg tataagaaac
       61 aaattaagaa aaagaaatca aaagaaaaat gtgatttcgt gcggtagggc gcatatagct
      121 cctgttaact acgatgcaac gttagcgcca catttggaga ctggtgcagg gaagtgggaa
      181 aatttaccgc ctgaattgct tctcgatata attcaacgag ttgaagccgg caagacgtcg
      241 tggcccgcaa gacaagacgt tgttgcttgc gcggcggttt gtaggttgtg gagagatgtt
      301 attaaaaaga ttgttcaaac acctgaacaa tgtgggctgc tcactttccc aatttcattg
      361 aaacagcctg gtccaagagg tgaacccatc caatgtttta taaggaggga tagagctgct
      421 tccacgtatc ggctatatct tggcttgagc ccagcattgg ctggagatgc aagcaagctg
      481 ttattggcag caaagaaggt gagaaaggcg acgggaacag agttcctgat atcattagct
      541 gccgatgaat tttctcgaac cagcaatact tttgttggaa aattaagctc caattttctt
      601 ggcaccaagt ttgtcattta cgacgaccaa ccttcgtacg accctctaat tgaggcaaac
      661 cctaaattcg ggtcaaagat ggcatcgctt aggtattcac ctcctctatc ggtacgaaac
      721 gtcaccatat cttacgaaat taattttcta agaacaaaag gaccaagaag aatgcattgt
      781 accatgaata caatcccttc atctgtgttc caagaaggcg gggccacccc taccccacta
      841 acttttccag acgacgaatg ttcaccttat aatcaaacga tttcaaacaa gaacgaagaa
      901 cctctgattt tgaaaaacaa agcgccaagg tggcacgaac aactacaatg ttggtgtttg
      961 aattttagag gacgtgttac tgtagcgtct gtgaagaact ttcagttagc tgttgacctg
     1021 ccacataatg gtcaaagtat ggaacaacaa gatgatgtca tactacagtt cggtaaaatt
     1081 gggaaggata tttttactat ggactatcga tacccattat ctacttttca ggcgcttgca
     1141 atatgcttaa gcagtttcga cactaaacca gcttgtgaat ga
//
LOCUS       XM_071830805            3477 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840544), mRNA.
ACCESSION   XM_071830805
VERSION     XM_071830805.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3477
                     /gene="LOC139840544"
                     /note="uncharacterized LOC139840544; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840544"
     CDS             1..3477
                     /gene="LOC139840544"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686906.1"
                     /db_xref="GeneID:139840544"
                     /translation="MSAAQIEEMVTQRVAEAVANAEAGCAANAAKERRPEVANVQQRC
                     NYKTFMGCKPQSFSRTEGPVGLMRWLEKLESVFQISECADNDRVKFASCTLLDGALTW
                     WNSFAKSVGIDVAYNTPWEEFKKQTIDEYCPRNEIQRLETELWNLKLQGTDISGYTNR
                     FLELALMCPTMVTPEYKRVERYIWGLSEDIQGNVLSSKPETIQSAIRMAHDLMAQVVR
                     RQLINAKTDVKVTTEKRKWDGNQEGNSKKQGTAKVESSNSKYAGKKPYCRNDKNDKNN
                     QNVCFGCGQAGHFKKECPKIKKGETAKGRAFQITMKEACKDPELVTGTFLIDNHLASI
                     LFNTGADKSFIAKDFSVVINRPLTALDTRYAVELANGKLIKVDKIMRGCTLNLSNNPF
                     EVDLMPVELGSFDVVIGMNWLSKNHADINCAEKSIRIPLENGENLVIQGDKSKVNLNI
                     ISCMRARRYLKKGYSSILAHVKELKTKEVGLEDVPVVREFPQIDLVPGAAPVAKLPYR
                     LAPSELQELSNQLQELLDKGFIRPSVSPWGAPILSEYHQLRVKEDDVPKTAFRTRYSH
                     YEFLVMPFGLTNAPAVFMDLMNRVCKPYLDKFIIVFIDDILIYSNNKEEHEQHLRLVL
                     QLLEKEQLYAKFSKCGFWLNSVQFLGHVVDREGIHVDPTKIEAIKNWEVPKNPSQIRQ
                     FLGLAGYYRRFIQNFSKIARPLTVLTHKNKKFEWSSAQESAFQMLKQKLTTAPVLSLP
                     EGNEDFLVYCDASRQGLGWEANIVADALSRIERVKPLRVRSLNMTIQINLVSRIQNAQ
                     SEAMKEENMKKEGISEKDKNFEVKSEGTRYFANRIWIPKIGGLRELAMDEAHKTRYSI
                     HPGSGKMYHDLKEFYWWPSMKAEIATYVGKCFTCSKVKAENQKPSGLLQQLEIPEWKW
                     EGITMDFITKLPKTAKGYDTIWVIVDRLTKSAHFLPMKEIDKMEKLADLYIKEISERT
                     ILTFENMLRACVIDFGSVWDQYLPLAEFSYNNSYRSSIKAAPFEALYGRKFSPWKGVI
                     RIGKRGKLSPRYVGSFEVIERIGPVAYRLKLPQELSGIHNAFHVSNLKKCLSDENLVI
                     PLEELSIDDKLHFVEEPVEVLDREVKTLKHSRIPIVKVRWNARRGPEFTWEREDHIRQ
                     KYPHLFDNRSTS"
     misc_feature    265..564
                     /gene="LOC139840544"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    835..885
                     /gene="LOC139840544"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
     misc_feature    904..1281
                     /gene="LOC139840544"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1009..1011,1015..1017,1021..1023,1096..1104,
                     1219..1221)
                     /gene="LOC139840544"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1009..1017
                     /gene="LOC139840544"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1009..1011
                     /gene="LOC139840544"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1096..1107,1117..1128)
                     /gene="LOC139840544"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1582..1959
                     /gene="LOC139840544"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    1723..1725
                     /gene="LOC139840544"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    2146..>2274
                     /gene="LOC139840544"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    2521..2685
                     /gene="LOC139840544"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgagtgctg ctcaaattga ggagatggta actcaaagag tagctgaagc agttgctaac
       61 gctgaagcag gatgtgcagc aaatgccgcg aaagaaagga gacccgaagt ggcaaacgtt
      121 cagcaacgat gcaattacaa gacatttatg ggttgcaagc cccagagttt ttcaagaacg
      181 gaaggacccg tagggttaat gaggtggctt gaaaaactag aatcagtatt ccaaatcagt
      241 gagtgcgcag acaatgatcg agtgaagttc gcatcatgta ctctcttgga tggagcctta
      301 acctggtgga attcttttgc caagtctgtg ggtattgatg ttgcatataa tacgccatgg
      361 gaagaattca agaagcagac gatcgatgag tattgcccga ggaatgagat tcagaggcta
      421 gaaactgagt tgtggaactt aaagttacaa ggaacggata tctcaggata tactaatcga
      481 tttcttgagt tagctttaat gtgcccaacc atggtcactc ccgaatataa gagagttgag
      541 agatatattt ggggtttgtc agaagacatt caaggtaatg tactgtcatc aaaaccagaa
      601 acgatccaga gtgctattcg tatggcgcat gatttaatgg ctcaagtagt gcgacgtcaa
      661 ttaatcaatg ctaagacgga tgtgaaggtt acgactgaga agcgtaagtg ggatggaaac
      721 caagaaggca attctaagaa gcaaggaact gctaaggtgg agagttcgaa tagcaagtat
      781 gcaggaaaga aaccctattg caggaatgat aagaacgata agaacaatca gaatgtttgc
      841 tttggatgtg gtcaagcagg tcatttcaag aaagaatgtc ctaagattaa gaagggtgaa
      901 acggctaagg gccgagcttt tcagattacc atgaaggaag cttgtaaaga cccagagtta
      961 gtcacgggta cgttcctcat cgataatcat ttagcatcta ttttattcaa taccggcgct
     1021 gataaaagtt ttatagctaa ggattttagt gttgtgataa ataggccttt aactgcctta
     1081 gacactagat atgctgtaga attggcaaat ggtaagttga taaaagtaga taagattatg
     1141 cgaggttgta ccttaaattt gtcaaacaat ccgtttgaag ttgatttaat gcccgttgag
     1201 ttaggaagtt tcgatgttgt tattggtatg aactggttat ctaagaacca tgcggatatt
     1261 aattgtgcgg aaaagtctat ccgtatacct cttgagaatg gtgagaactt agtcatccaa
     1321 ggagataaga gtaaggtaaa ccttaatatt atttcctgta tgagagctcg aagatatcta
     1381 aagaagggat attcttccat tctcgcgcac gtgaaagaac tcaaaacaaa agaagttgga
     1441 ttagaagatg ttccagttgt tcgtgagttt cctcaaattg atttagttcc cggagccgca
     1501 ccagttgcca aattgcctta tcgattagct ccttcagaat tacaggaact atcaaatcaa
     1561 ctccaagaat tgttagataa aggatttatt cgacctagtg tttctccgtg gggtgctcca
     1621 atcttatcag agtaccatca attaagagtc aaagaggatg atgtgcctaa gacagcgttc
     1681 agaacgcgtt atagccatta tgaatttttg gtaatgccat ttggtttaac caacgcccct
     1741 gcagtattta tggatctgat gaatagagta tgcaaaccgt atctagataa attcatcata
     1801 gtatttatcg atgatatttt gatctactcc aataataaag aagagcacga gcaacatttg
     1861 agattagttt tgcaactttt ggaaaaagag cagttatatg ctaaattttc aaagtgtggt
     1921 ttttggctca attcagtcca atttttgggt catgtggttg atagagaagg catccacgtt
     1981 gatcctacca agattgaggc tattaagaat tgggaagtac ctaagaaccc gtctcaaatt
     2041 cgtcaatttc taggacttgc tggatattat agaagattta ttcagaattt ctccaagata
     2101 gcaagaccat tgactgtgtt aacgcacaag aataagaaat ttgaatggtc ctcagcacag
     2161 gaatctgctt ttcaaatgtt gaaacagaag ttgacaaccg cacctgtact atcactacct
     2221 gaaggaaatg aagatttttt ggtttattgt gatgcatctc ggcaaggatt aggatgggaa
     2281 gcgaacattg tagctgatgc attgagtcgc atagaaaggg ttaaacctct gagagttagg
     2341 tcattgaata tgactattca gataaacctt gtgtctcgta ttcaaaatgc acaatcggaa
     2401 gctatgaagg aagagaacat gaagaaggaa ggaattagtg agaaggataa gaactttgaa
     2461 gttaagagtg aaggaacccg atattttgca aacagaattt ggattccaaa gattggtgga
     2521 ttgagagagc ttgcgatgga tgaagcacac aagacgagat attcaattca tccagggtct
     2581 gggaaaatgt accatgactt aaaggaattc tattggtggc caagcatgaa ggctgagatt
     2641 gcaacttatg ttggaaagtg ctttacatgt tcgaaggtca aggctgagaa tcagaaacca
     2701 tcagggttac tgcagcaact tgagattccc gaatggaaat gggaaggaat tacaatggat
     2761 ttcattacga agttgccgaa gactgcgaag ggttatgaca ctatttgggt aatagtggac
     2821 cgacttacga aatctgcaca tttcttaccc atgaaagaaa tcgacaagat ggaaaagttg
     2881 gcagatttgt atatcaagga gattagtgag agaactattc taacatttga aaacatgctt
     2941 cgagcatgtg taattgattt tggaagtgtt tgggatcagt atttacctct agccgagttt
     3001 tcatataaca atagttatcg ctcgagtata aaggctgctc catttgaagc tttgtatgga
     3061 agaaaatttt ctccatggaa aggagtaata aggattggga agcgaggaaa gctgagccca
     3121 agatatgtag gatcttttga ggttattgaa aggattggtc cagttgcata tagattgaaa
     3181 ctaccacagg agcttagtgg tattcataat gcttttcatg tttcgaactt gaaaaagtgt
     3241 ttgtctgatg agaatttagt gattccgtta gaagaattaa gtatcgatga caagttgcat
     3301 tttgtggagg agccagtaga ggtattggat cgtgaggtaa aaacattgaa gcatagtaga
     3361 attccaattg ttaaagttcg ttggaatgcc aggagaggtc cagagttcac atgggaacgt
     3421 gaggaccata taaggcagaa atatccccat ttattcgaca atcgaagtac ctcctaa
//
LOCUS       XM_071830806            1353 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840545), mRNA.
ACCESSION   XM_071830806
VERSION     XM_071830806.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1353
                     /gene="LOC139840545"
                     /note="uncharacterized LOC139840545; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840545"
     CDS             1..1353
                     /gene="LOC139840545"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686907.1"
                     /db_xref="GeneID:139840545"
                     /translation="MERYFKRNISSVDGETSSQYISQPSLKPSMLKKVDINDLPWDPA
                     DRKRISDYDPNQREEIRRLYWQREPYQPGGHVFPQKVIGSKERRFVDQVGHQGGSDAF
                     VSSGFNCWAKKKRLATHAGDITSFHYKALQKCEDLMKPKQSIAYVFQRQSERDARWGS
                     HHKTILGLISLFPEVVEVLEYVKEDGLTNALSQALQRKDQNIVEAVSLVNGTTSSLQR
                     LREDGFDEILEHAYCFCEQYKLERVNMDDVYITSRNRKTNMTNRHYFEFDIFNTVLDR
                     QIQEFGDRFGEVSTELLSNISALSPRDSFSMFDKKKLINLSKMYPCDFTHTDREKLDG
                     ELDVYYDIIRRDEKFASLNGITDLSKLMVETGKDISYRYVYRLLKLALVLPVATATVE
                     RCFSAMKLVKSELRNRMGDDFLNDCLIGAIEKEALLKIKDEAVMKRFQQMEDRRGQLN
                     "
     misc_feature    298..>459
                     /gene="LOC139840545"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    <1120..1275
                     /gene="LOC139840545"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggaaagat attttaagag aaatatatca tcggttgatg gagaaacttc aagtcaatac
       61 atttcacaac ctagcttgaa accttcaatg ctcaaaaaag tcgatataaa tgatcttcca
      121 tgggatcccg cggatagaaa aagaatttca gactatgatc ctaatcaaag agaagaaata
      181 agacgactat attggcaaag agaaccatat caaccaggtg gtcatgtatt tccacaaaaa
      241 gtaataggat caaaggaaag acgttttgta gatcaagttg gacatcaagg gggaagtgat
      301 gcatttgtgt cttccggatt taattgttgg gctaaaaaga agagacttgc tactcatgcg
      361 ggtgatatta ctagttttca ttataaggca cttcaaaaat gtgaagattt gatgaaacca
      421 aaacaatcta ttgcgtatgt ttttcaaagg caaagtgaac gtgatgcacg gtggggatct
      481 catcacaaaa caatattagg tttgatttct ttgtttccgg aagttgtcga ggtgcttgag
      541 tatgtgaaag aagatggcct aacaaatgca ttgtcccaag cacttcaaag aaaagatcaa
      601 aatattgtgg aagcggtttc attggtgaat ggaacaacaa gttcattgca gaggttaaga
      661 gaagatgggt ttgatgaaat attggagcat gcctattgct tttgtgaaca atataagctt
      721 gaacgtgtga atatggatga tgtttatatt acatcaagaa accgaaagac caacatgacc
      781 aatcgccatt atttcgaatt tgatatcttc aatactgttc tagataggca aattcaagaa
      841 ttcggtgatc gttttggtga ggtaagcacc gaattacttt caaatatttc cgcattgagc
      901 ccgcgtgatt cgttttcaat gtttgataag aaaaagttga taaatttgag taagatgtac
      961 ccttgtgatt ttactcatac ggacagggaa aaacttgatg gtgaacttga cgtatattat
     1021 gatattatac gacgggatga gaaatttgct agtttgaatg ggatcaccga cctttctaaa
     1081 ttaatggtgg aaactggaaa agatatttca tatcgttatg tttatcgatt gctaaagcta
     1141 gctttagttt tgcctgttgc aactgcaacc gtagaaagat gtttttctgc aatgaagctt
     1201 gtgaaatccg aattacgaaa tcgaatgggt gatgattttt tgaacgactg tctaattggt
     1261 gccatagaaa aagaagcact tttaaaaata aaagatgaag ccgtaatgaa acgctttcaa
     1321 cagatggaag atcgaagagg acagttgaac tag
//
LOCUS       XM_071830807            2166 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840546), mRNA.
ACCESSION   XM_071830807
VERSION     XM_071830807.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2166
                     /gene="LOC139840546"
                     /note="uncharacterized LOC139840546; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840546"
     CDS             1..2166
                     /gene="LOC139840546"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686908.1"
                     /db_xref="GeneID:139840546"
                     /translation="MYEIGRATSEFIDSVDEFITVAEIDQLEKGNTTISCPCKKCKNA
                     RWYADSTDIKNHLTACGFMRGYTCWSFHGESLADLNPPVSYNDTDNEEDSYNSDNNVN
                     FDDMFDDLDMEDNVADKYHDRLQPLFIDAKKPLYTGCMNFTKLSAVIQLVNLKSNNGW
                     SDTSFTSLLELLNKILPEGNELPVSTYQAKKLMCPMGLEIQRIHAYPNDCMLYRNKDK
                     DLHQCKVCGTSRYKRGKPTDNVDSDVSENGPPAKLLWYLPIIPRLKRLCANEKDTKLL
                     RWHAEDRKNDGKMRHVADSLQWKNFDKDFEEFRDEICNIRFGLSSDGINPFGDLSIRH
                     STWPVLLCIYNLPPWLCMKRKYIMMSLLIQGPKQPGNDIDVYLQPLVDEMMKLWSTGI
                     HVYDAYKKEYFQLRAMLFCTINDFPAYGNLSGYSTKGKKACPICEENTHSIWLTNCKK
                     PAFMGHRRELAENHPYRKKSDLFDGTIENRKLPPPLDGKTTLSKVANINVVLRKKGFG
                     PPKRIWKKRYIFWKLPYCKHLLDRHCLDVMHIEKNICESLIGLLLNIPGKTKDEIEVR
                     RDMELMNIIPELQPKDIDGRSTKFLPPACYTMLKFEKTKFCQCLHGIKVPSGYTANIR
                     KLVSMKDLKLLGMKSHDCHVLMTQMIPIAILGILPNRIRHTITKLFLFFNMIHLKVID
                     RDVLDEYQRDIILTLCELEMYFPPSFFDVMVHLVSHKEK"
     misc_feature    1..222
                     /gene="LOC139840546"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    856..1488
                     /gene="LOC139840546"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    2035..>2154
                     /gene="LOC139840546"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
ORIGIN      
        1 atgtacgaga taggtcgcgc tacctctgag tttatagata gtgttgatga atttattaca
       61 gttgctgaga ttgatcaact agaaaaagga aacaccacaa ttagttgtcc ttgtaagaaa
      121 tgcaaaaatg cacggtggta tgctgattca accgatatca aaaatcatct aactgcatgc
      181 ggatttatga gagggtacac atgttggtct tttcatggtg agtcattagc tgaccttaac
      241 ccgcctgttt cgtataacga taccgataat gaagaagatt catacaatag tgacaataat
      301 gttaattttg atgacatgtt tgacgatttg gatatggagg ataatgttgc tgataagtat
      361 catgacagat tacaaccact atttattgac gctaaaaaac ctttatatac cggttgtatg
      421 aattttacaa aactttccgc cgtgatacaa ctggttaact taaaatcaaa caatggttgg
      481 agcgacacaa gtttcactag cctgttagag ttgttgaaca aaatactacc agaaggtaat
      541 gagttgccag tttcaacata ccaagcaaag aaattaatgt gcccaatggg attggaaata
      601 cagagaatac atgcttatcc aaatgattgt atgttataca ggaataaaga taaagacctt
      661 catcaatgta aggtatgtgg tacatctagg tataaacgtg gaaaaccaac tgataatgtt
      721 gatagtgatg tgtcagaaaa tggacctcct gcaaaattat tgtggtactt gcctatcata
      781 ccaagattaa agagattatg tgcgaatgag aaagatacaa aattattacg ttggcatgct
      841 gaagatcgta aaaatgatgg aaaaatgcga catgtggccg attcacttca atggaaaaat
      901 tttgataaag attttgaaga atttagggat gagatatgta atataaggtt cgggctcagt
      961 tcagatggaa ttaatccttt cggagatttg agtatccgtc acagcacgtg gcctgttctt
     1021 ctttgcattt ataacctacc gccttggcta tgtatgaaaa gaaaatacat aatgatgtct
     1081 cttttgattc aaggcccaaa gcaacctgga aatgacattg atgtttattt gcaaccatta
     1141 gttgatgaaa tgatgaaatt atggagtacc ggcatacatg tttatgatgc atacaagaaa
     1201 gaatacttcc aactacgggc aatgcttttt tgcaccatta atgattttcc tgcttatggt
     1261 aatttgtctg gatatagtac gaagggaaaa aaggcatgtc ctatttgtga ggaaaatact
     1321 cactcgatat ggctcacaaa ttgtaaaaaa ccggcattta tggggcatcg gagagagctt
     1381 gctgagaacc acccgtatcg taaaaagtcg gatttatttg atggtactat agagaataga
     1441 aaactaccac caccattgga tggaaaaact acactctcca aagttgctaa tataaatgtt
     1501 gtgttgagaa agaaaggttt tggtcctccc aaacgtattt ggaagaaaag gtatattttt
     1561 tggaaattac cctactgtaa gcatttacta gaccgacatt gtcttgatgt tatgcatatt
     1621 gagaaaaata tttgtgaaag tttgataggg ttactgttga acattcctgg aaaaacaaaa
     1681 gatgaaattg aagttagaag ggatatggaa ttaatgaata tcataccaga gctacaacct
     1741 aaagatattg atggaaggtc caccaagttt cttcctccgg cctgttatac tatgttgaag
     1801 ttcgagaaaa ctaaattttg tcaatgttta catggtatta aggttccatc aggatacact
     1861 gctaacatta ggaagttggt ttcgatgaaa gatttgaagt tacttggtat gaagtcacat
     1921 gattgtcatg tactaatgac ccagatgatt cctatcgcaa ttcttggaat tctacccaac
     1981 cgtattcgac acacaataac aaaactattc ttatttttca acatgattca tttaaaggtg
     2041 attgatcgtg atgtgctgga tgaatatcaa agagatatca tacttactct ttgcgaactc
     2101 gagatgtact ttccaccttc tttctttgat gtcatggttc atttggtatc tcataaggag
     2161 aaataa
//
LOCUS       XM_071830808             849 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840547), mRNA.
ACCESSION   XM_071830808
VERSION     XM_071830808.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..849
                     /gene="LOC139840547"
                     /note="uncharacterized LOC139840547; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840547"
     CDS             1..849
                     /gene="LOC139840547"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686909.1"
                     /db_xref="GeneID:139840547"
                     /translation="MLGCDISNSFVKVIGTGSDTSFWDEVWCGNEAFFLKYPRLHRLE
                     LHKNASVADRISWSDSRPSITWEWTSQPRWRAADDLENLEKLLNVIPPACGKPDTWTW
                     KHEKHGKYSSASLAAVLTNAFLANKPLPEPTLLNKLIPQKIGIFMWRVQKNRLPVRIE
                     LDNKGIDLNSVLCPVCNDDIESINHALVACKSAASMWEKVRLWWGFDNLPITSYSDLA
                     LCPSPHIRDNLGSQIWQAVIWVNTVDEQIEGEGKIGFFEGLAKRGLISPFSGTIVSDG
                     SSNVLT"
     misc_feature    328..570
                     /gene="LOC139840547"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgttagggt gtgatatttc taattctttc gttaaagtga taggcacagg ctcagacaca
       61 agcttttggg atgaggtatg gtgtggtaac gaagcattct ttctcaaata tcccaggtta
      121 catagacttg aactccacaa aaacgcttcg gttgctgaca gaatctcttg gtcagacagc
      181 aggccttcta tcacctggga atggacctcg caaccaaggt ggagggcggc ggatgatctc
      241 gaaaatctgg aaaaacttct aaatgtgatc ccccctgctt gtggtaaacc agatacatgg
      301 acatggaaac atgaaaagca tggtaaatat tcttcggctt cgttagctgc tgttttaacg
      361 aatgctttct tggccaataa gcccctgccc gaacctacct tgctcaacaa gttaatccct
      421 caaaaaattg gtattttcat gtggagagtg caaaaaaata ggctccctgt tagaatcgaa
      481 ttagataaca aagggattga ccttaactcc gttctttgtc cggtctgcaa tgacgatatc
      541 gagagtatca accatgcact tgtcgcctgc aaatcagctg cgtctatgtg ggaaaaggtt
      601 cggttgtggt ggggttttga taatctccca atcacgtcct actccgatct tgccttatgc
      661 ccttctccgc atattcgtga taacttgggg tctcagattt ggcaagcggt gatttgggtg
      721 aatacggtag acgaacaaat tgaaggcgaa ggaaaaattg gtttcttcga agggcttgca
      781 aagcggggtt tgatttctcc attttcgggc accattgtca gtgacgggtc gtcgaatgtc
      841 ttaacgtaa
//
LOCUS       XM_071830809            1356 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840548), mRNA.
ACCESSION   XM_071830809
VERSION     XM_071830809.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1356
                     /gene="LOC139840548"
                     /note="uncharacterized LOC139840548; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840548"
     CDS             1..1356
                     /gene="LOC139840548"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686910.1"
                     /db_xref="GeneID:139840548"
                     /translation="MIRTLRTDNGMEFQNSILNSFLDQTGITHQSSASRTPQQNGVVE
                     RRNRTLVETARTMLVYSKLPPSLWAEAVTTACFTQNRSIINRRFDKAPYELLFNRRPN
                     VKYFCIFGCVCYVLNDEDNLGKFDVRGDEAIFIGYSQDHVAYRVYNRRTRIIKESTNV
                     NFDEMSGMVLGHNGSRPGLNSDPHFRHVPLATSDDLDVLFEPIIPPMSSNPTIPSEPA
                     PPKSITIGSSTPAVVSESPSDESNSSEFLLLDDLDTGVSSSNNAPITSSHPPAVESSF
                     LESSEDTPSNETDTRSLDTATPPILSTEQIADTLVPLWEENATYPTDNTELSGSSSSS
                     HVDTSLNDGSTSPLPHSTKWTADHPIHQIIGDPDAPVSTRKASNNECLFAAFLSMIEP
                     KTAFEDPHGIIIRNKARLVAKGYRQQEGIDYNKTFAHVARLEAIRLFLAYAAHKRLTV
                     Y"
     misc_feature    <4..201
                     /gene="LOC139840548"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
     misc_feature    <616..>1134
                     /gene="LOC139840548"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); Region: Herpes_BLLF1; pfam05109"
                     /db_xref="CDD:282904"
     misc_feature    1210..>1332
                     /gene="LOC139840548"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgattcgaa ccctcagaac tgataacggc atggaatttc aaaactcgat tcttaattct
       61 tttcttgacc agaccggtat cacccatcaa tcctctgcct ctcgcactcc acaacaaaat
      121 ggcgtagttg aaagacgaaa tcgtactctt gttgaaaccg caagaacaat gctcgtttat
      181 tccaaattac ctccgtccct ctgggctgag gctgttacca ctgcatgctt tacccaaaat
      241 cggtccatca ttaatcgtcg gttcgacaaa gctccatatg aacttctttt caatcgtcga
      301 cccaacgtga agtacttttg catatttgga tgtgtgtgct atgttctaaa cgacgaggac
      361 aaccttggaa agtttgatgt tcgcggtgat gaagcaatat ttattggcta ctctcaagat
      421 catgtggcat atcgtgttta taatcgacga actcgaatca ttaaagaaag caccaatgtc
      481 aattttgatg agatgtctgg aatggtgctt ggtcataacg gctctcgccc tggactcaat
      541 tctgatcctc acttccgtca tgttccactg gccacctctg atgatctgga tgtgttgttt
      601 gaacccatca tccctccaat gtcatcaaac cccacgatac cctctgaacc ggctcccccc
      661 aaatcaatca caatcggttc ctctactcca gcggtcgtga gcgaatcacc atccgacgaa
      721 agtaattcct ccgaatttct tcttctagat gaccttgaca ctggagtgtc ttcctcaaac
      781 aacgctccca ttaccagctc tcatcctcca gctgttgaat cgtcttttct cgaatctagt
      841 gaagatactc cttcaaatga aacagatact aggtctttag acactgcaac tccccccata
      901 ctttccactg aacaaattgc agataccctt gttcctctgt gggaagaaaa tgccacctac
      961 cctactgaca acactgaact ttctggatcc tcatcttctt cgcatgtcga cacctctctt
     1021 aatgatggat ctacttcacc tcttccacat tccacgaaat ggactgcgga tcatccaatt
     1081 catcaaatca ttggtgatcc agacgctcct gtcagcactc gtaaggcttc taacaatgaa
     1141 tgcctcttcg ctgcctttct gagcatgatc gaacctaaaa ctgcctttga ggatcctcac
     1201 ggcatcatca ttcgtaacaa agcacgtctt gtagccaaag gatacagaca acaagaggga
     1261 attgactaca acaaaacatt tgctcatgtg gctcgattag aagccatccg tttatttctt
     1321 gcatatgctg ctcacaagcg attaaccgtt tattaa
//
LOCUS       XM_071830810             469 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840549), transcript variant X1, mRNA.
ACCESSION   XM_071830810
VERSION     XM_071830810.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..469
                     /gene="LOC139840549"
                     /note="uncharacterized LOC139840549; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840549"
     CDS             58..285
                     /gene="LOC139840549"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071686911.1"
                     /db_xref="GeneID:139840549"
                     /translation="MSCSSGKCNCGSSCSCGSSCNCNSCNVEKSTTTMIIVDGVAPRM
                     TFADGTETSFVAESGNGCKCGENCKCDPCNC"
     misc_feature    <139..282
                     /gene="LOC139840549"
                     /note="Metallothionein; Region: Metallothio_2; pfam01439"
                     /db_xref="CDD:396155"
     polyA_site      469
                     /gene="LOC139840549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcttcaatc cattcaaaca agcaaattta gtactttcta aaacaacctc aaaaatcatg
       61 tcttgctcaa gtggaaagtg caactgcggc tcaagctgtt catgcggcag tagctgcaac
      121 tgcaactcat gcaacgttga gaaatcaacc accaccatga tcatcgtcga cggtgttgca
      181 cccaggatga ccttcgccga tggaaccgag accagctttg ttgccgagag cggaaacggg
      241 tgcaagtgtg gagaaaactg caagtgcgat ccttgcaact gctaaggata cggtcatatg
      301 atcgagccat taacccgaac aagaagaagc tatgttttgt tttatgttgt gtttttatgt
      361 attaaataag aaggaaccta taagtgttat ttggacattg taatgggttt ccatggctgt
      421 ttaccgttta tgtaaaactg aattatataa aagttgactt gtttgggta
//
LOCUS       XM_071830811             479 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840549), transcript variant X2, mRNA.
ACCESSION   XM_071830811
VERSION     XM_071830811.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..479
                     /gene="LOC139840549"
                     /note="uncharacterized LOC139840549; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840549"
     CDS             58..285
                     /gene="LOC139840549"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071686912.1"
                     /db_xref="GeneID:139840549"
                     /translation="MSCSSGKCNCGSSCSCGSSCNCNSCNVEKSTTTMIIVDGVAPRM
                     TFAEETETSFVAESGNGCKCGGNCKCDPCNC"
     misc_feature    <139..282
                     /gene="LOC139840549"
                     /note="Metallothionein; Region: Metallothio_2; pfam01439"
                     /db_xref="CDD:396155"
     polyA_site      479
                     /gene="LOC139840549"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcttcaatc cattcaaaca agcaaattta gtactttcta aaacaacctc aaaaatcatg
       61 tcttgctcaa gtggaaagtg caactgcggc tcaagctgtt catgcggcag tagctgcaac
      121 tgcaactcat gcaacgttga gaaatcaacc accaccatga tcatcgtcga cggtgttgca
      181 cccaggatga ccttcgccga ggaaaccgag accagctttg ttgccgagag cggaaacggg
      241 tgcaagtgtg gaggaaactg caagtgcgat ccttgcaact gctaaggata cgatcatatg
      301 atcgaaccat taacccgaac aagaagaagc tatgttttgt tttatgttgt gtttttcatg
      361 tattaaacaa gaaggaacct ataagtgtta tttggacatt gtaatgggtt tccatggctg
      421 tttaccgttt atgtaaaact gatttatata agagttgact tgtttgggta tttgtggta
//
LOCUS       XM_071830812            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840550), mRNA.
ACCESSION   XM_071830812
VERSION     XM_071830812.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139840550"
                     /note="uncharacterized LOC139840550; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840550"
     CDS             1..1077
                     /gene="LOC139840550"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686913.1"
                     /db_xref="GeneID:139840550"
                     /translation="MNCKPPSYKGTEGPIELNRWFEKMESVFRLCNCGEDDKVKYATG
                     NLSGGALTWWTAYASTVGWTAALAIPWETLKIMLAGKYCPRNQVQKFEVEFWELRMKI
                     LEVEEYSNRFLELAALCPSMVTPESKKIEKYIIGIPHQIQGNVIAAGKETIEATMLMT
                     QNLVMAARRNAKEKQTEVKATDNKRKFEPTQGTCQNSNKKVGDTIKSGYIGTKPLCNR
                     CDSIIMGFALLCAENVRRLVTRPRIASYVSTEFCALFDEKPQNLDTKCLVEMANGKFI
                     KVDRIYKECNLTLANKTFKVDLLLVELGSFDVVLGMDWLSPMKVGIQCFDKTINIPIE
                     TSEILVIQGDKSGSKLNLISCIKT"
     misc_feature    118..417
                     /gene="LOC139840550"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <733..987
                     /gene="LOC139840550"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(802..813,823..834)
                     /gene="LOC139840550"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaattgta agccaccaag ctataaagga accgaaggac caattgaact aaatcgctgg
       61 ttcgaaaaga tggaatctgt gtttcgtttg tgtaactgcg gtgaagatga caaggtcaag
      121 tatgctactg gaaatctatc tggtggagct ttaacttggt ggactgcata tgctagtacc
      181 gttggatgga ctgctgccct agccatacca tgggaaacat taaaaatcat gctggctggt
      241 aagtattgtc ccaggaatca agtccagaaa tttgaagtcg aattctggga gttaagaatg
      301 aaaattcttg aagttgaaga atacagcaac cgatttctag agctagctgc tctatgccct
      361 agtatggtta ctcctgaaag caagaagatt gaaaagtata tcatcggtat tcctcatcag
      421 attcagggga atgttatagc tgctggtaaa gaaactattg aggctacgat gttgatgact
      481 caaaatctgg ttatggctgc gagaagaaat gccaaggaaa aacagaccga agttaaggct
      541 actgataaca aaagaaagtt cgagcctact caaggtacat gtcagaattc aaataagaag
      601 gttggtgata ctataaaaag tggttatatt ggaacaaagc cgctatgtaa tcgctgtgat
      661 agtatcatta tgggttttgc actgctgtgt gcggaaaatg taagaagatt ggtcactcgg
      721 ccaagaattg caagttatgt gtctactgaa ttctgtgcct tatttgatga aaaacctcaa
      781 aacttagaca ctaagtgtct tgtagaaatg gccaatggga aatttataaa agttgaccgg
      841 atctacaagg aatgtaatct gactctagcc aataaaacct tcaaggttga cttattgctt
      901 gttgaactag gaagctttga tgtagtctta gggatggatt ggttatcccc gatgaaagtt
      961 ggtatccagt gttttgataa gacaattaat attcctatcg aaactagtga aattcttgtt
     1021 atccaaggag ataagagtgg ttccaaactt aatcttatct catgcatcaa aacatga
//
LOCUS       XM_071830813             432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-galactosidase 5-like
            (LOC139840551), mRNA.
ACCESSION   XM_071830813
VERSION     XM_071830813.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..432
                     /gene="LOC139840551"
                     /note="beta-galactosidase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840551"
     CDS             46..432
                     /gene="LOC139840551"
                     /codon_start=1
                     /product="beta-galactosidase 5-like"
                     /protein_id="XP_071686914.1"
                     /db_xref="GeneID:139840551"
                     /translation="MWDDLMIKAKNGGLDVIDTYVFWNVHEPTPGIYDFSGRYDLVRF
                     IKTVARHGLYVNLRIGPYVCAEWNYGGLPVWLKYVPGISFRADNEPFKAAMQGFTRKI
                     VEMMKAEKLFESQGGPIILSQEHILI"
     misc_feature    46..>414
                     /gene="LOC139840551"
                     /note="beta-galactosidase; Provisional; Region: PLN03059"
                     /db_xref="CDD:166698"
ORIGIN      
        1 attctcattt ctggctccat acattatcca agaagtaccc ctgaaatgtg ggatgatttg
       61 atgattaaag caaaaaatgg gggcttagat gtaattgaca cttatgtgtt ttggaatgtt
      121 catgagccca caccagggat ttatgatttc agtggcagat atgatctagt aaggtttatt
      181 aagacagtgg caagacatgg actttatgta aatttacgaa ttggtcctta tgtttgtgct
      241 gaatggaatt atgggggttt acctgtatgg ttaaagtatg ttcctggtat cagctttaga
      301 gcagacaatg agcccttcaa ggcagcaatg caagggttta cgcgaaaaat tgttgagatg
      361 atgaaggctg aaaagttgtt tgaatcacaa ggtggtccga tcatcctctc gcaggaacat
      421 attttaatct aa
//
LOCUS       XM_071830814             939 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840552), mRNA.
ACCESSION   XM_071830814
VERSION     XM_071830814.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..939
                     /gene="LOC139840552"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840552"
     CDS             1..939
                     /gene="LOC139840552"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686915.1"
                     /db_xref="GeneID:139840552"
                     /translation="MTDLGPLNYFSGISVTRTSSEMFLSQKKYASEIIVRADMGNCNP
                     SRTPVDTSTKLTASGPPVKDPTMYRSLVGALQYLTFTRPDISYAVQQICLFMHDPREP
                     HLAALNGVTLDLGLQLLASSTTSLVAYSDADWAGCPSTRRSTSGYCVFLGDNLLSWSS
                     KRQHTPSRSSAEAEYRGVANAVSETCWLRNLLRELHCPLFSATLVYCDNVSAVYMSGN
                     PVQHQRTKHIEIDIHFVRDLVTKGQVRVLHVPSRYQYADIFTKGLPTSLFDEFRSSLS
                     VRTAPATTAGDQFLKEILNNLYVYNKRRSNQGTYEL"
     misc_feature    <1..147
                     /gene="LOC139840552"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    379..795
                     /gene="LOC139840552"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(391..402,505..513,520..522,622..624,700..702,
                     781..783)
                     /gene="LOC139840552"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgacagacc taggaccatt gaactatttt tcaggcatct cagtcacccg cacatcttcc
       61 gaaatgtttt tatctcagaa gaagtatgct tctgagatta ttgtgcgtgc agatatgggt
      121 aactgtaacc cgagcaggac tcccgtcgac accagcacca agcttactgc ttctggccca
      181 cccgttaagg accccactat gtaccgtagt cttgtaggtg cgcttcagta ccttaccttc
      241 actcgtccgg atatctcgta tgctgtacag cagatttgtc tatttatgca tgacccacga
      301 gagcctcatc tggcagctct caacggtgtc acactagatc ttggtcttca gctcttagca
      361 tcctccacca catcattggt agcatactcg gatgctgatt gggctggttg cccgtccact
      421 cgtcgttcta cttcaggata ctgtgtgttt ttgggggata acttattgtc ttggtcctct
      481 aagcggcagc atactccatc tcgttcaagt gctgaagctg agtatcgtgg cgttgcaaac
      541 gccgtttccg agacatgttg gcttcgtaac ctgcttcgtg agcttcactg ccctctgttc
      601 tcggccacat tggtttattg tgataatgtc agtgccgtat acatgtctgg taatccggtt
      661 cagcaccaga ggaccaaaca cattgagatc gacattcact ttgttcgtga ccttgtcaca
      721 aaaggtcagg ttcgggttct tcatgttccc tctcgctatc aatatgcaga tatcttcacc
      781 aaaggtctcc cgacatcact atttgacgag tttcgatcca gtttgagcgt acgcactgct
      841 cccgctacaa ctgcggggga tcaattctta aaagagatac tgaacaacct ttatgtctac
      901 aataaacgca ggtccaatca aggaacatac gagctatag
//
LOCUS       XM_071830815            2334 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840553), mRNA.
ACCESSION   XM_071830815
VERSION     XM_071830815.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2334
                     /gene="LOC139840553"
                     /note="uncharacterized LOC139840553; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840553"
     CDS             1..2334
                     /gene="LOC139840553"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686916.1"
                     /db_xref="GeneID:139840553"
                     /translation="MTTPSKYDKVYTVTSVTHLIPIKLDLAKLNYTHWSTLFSNHCAA
                     FNVDSFLKTATTSEPPTDDWKKVDAVVMGWIFLTISEPLLERLLNSHPASSHDAWEFL
                     KKIFHDNKRSKTVELTAELRALTIGELTAEAYFRKIDSIASLLDNLGSHIEDDELVTY
                     AINGLNDRFPHATHIILHSKPFPDFDTVRSMIMLEEMQFQRKTRSSHEMQGNPSAPTV
                     LVAQAVSSPPPRNQSNAPQVCRNFNRGHCRFGDKCRYLHQVIRNSTGSPTPNTGLNKT
                     NGNTQAQLLCIIAAQQNIIAQQQFMRPNSQSVPTLGSRNNLTSFSRPPGFHNTSPQAH
                     YIGLSPSYNSTTPSLVQQPMFAAPQQVQQPMFSVPAQTHIGPQHVANQSTIGPTSYNN
                     GQPSYNPFTFTHELGHETIVSNAFTATTLPDYGNTGWTMDTAPRSTPCIFLGYPSNHR
                     GYRCFDLATHKIILSRHATFDETSFPYSATTTSPPPSYEFLDPPPNLFSRTFSDVINT
                     TPTSQKIPTPAPPSVAPPQNTTSTHPMITRHQLGTTKPVQRLNLLLSNPSPTPKTYSY
                     ALNDPNWHHAMTDEYNALIKNGTWTLVPRPSDTNIVHSMWLFKHKFNADGTLSRYKAR
                     LVANGRSQHIGIDCEETFSPVVKPTTIRTVLSLALSQHWPVHQLDVKNAFLHGHLSET
                     VYMHQPPGFHDLASPDHVFLLQKSLYGLKQAPRVWFHRFAGYAQCVGFLHSRCVSSLF
                     IYKQGTDIAYLLLYVDDIILTASTPAFLQRVIASLHA"
     misc_feature    214..606
                     /gene="LOC139840553"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    706..771
                     /gene="LOC139840553"
                     /note="zinc finger; Region: ZnF_C3H1; smart00356"
                     /db_xref="CDD:214632"
     misc_feature    <919..>1809
                     /gene="LOC139840553"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); Region: Herpes_BLLF1; pfam05109"
                     /db_xref="CDD:282904"
     misc_feature    1759..>2289
                     /gene="LOC139840553"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgacaactc caagcaagta tgataaggtt tatacagtta cttcggtcac acatctcatc
       61 ccgatcaaac tcgatctcgc aaaacttaac tacactcatt ggagtacact ttttagcaat
      121 cattgcgccg cctttaatgt tgattctttt ctcaaaactg ccaccacgtc cgagccacct
      181 acagatgatt ggaagaaagt cgacgctgtc gtcatggggt ggatattcct cactatttcg
      241 gaaccattac ttgaacgtct actcaattct catccagcat catcacacga tgcatgggag
      301 tttttgaaaa aaatatttca tgacaacaag cgctccaaaa ccgttgaact cacggctgag
      361 ttacgtgccc ttacaattgg tgagctaacc gccgaagcat acttcagaaa aatcgactcc
      421 attgcgtctc tacttgataa tctagggtcg catattgaag acgacgagtt ggtaacttat
      481 gccatcaatg gcctcaatga ccggttcccg cacgccacac acatcattct tcatagcaaa
      541 ccattcccgg attttgacac tgtgcgctct atgatcatgc ttgaagaaat gcagttccaa
      601 cgaaaaacac gttcatcaca cgagatgcaa gggaatccgt ctgcaccaac cgtgcttgtt
      661 gctcaagccg tgtcttctcc accgcctcga aatcagagca acgcgccgca agtttgtagg
      721 aacttcaacc gtggacattg caggttcgga gacaaatgtc gttaccttca tcaggtaatc
      781 cgtaactcta caggatcccc tacaccaaac acgggactga ataagacaaa tgggaatacc
      841 caagcccaat tgttgtgtat tattgcggcc caacagaaca ttatagccca acaacaattc
      901 atgcggccca attcacaatc ggttcccacc ttgggctcac ggaataactt gaccagcttt
      961 tctaggccac ccgggtttca taatacctca ccacaggccc attatatagg gctcagtcct
     1021 tcttacaatt cgactacgcc aagcctggtt caacagccca tgtttgctgc cccacaacaa
     1081 gtacagcaac ccatgttttc tgttccagca cagacccata ttggacctca acatgtcgca
     1141 aatcagtcca caattggtcc aacttcctat aacaatgggc agcccagtta caaccctttt
     1201 actttcacac atgaactcgg tcatgagact attgtttcga atgcgtttac tgccactact
     1261 ctccctgact acggtaacac gggttggact atggatacag ccccccgctc cactccatgc
     1321 atatttcttg gatacccgtc taaccatcgt ggctaccgtt gcttcgatct cgccactcac
     1381 aaaatcatac tttctcgtca cgccaccttc gacgagacct cttttcctta cagtgccact
     1441 accacttcac ccccaccctc atacgagttt cttgacccgc ctcccaatct cttctctcgc
     1501 accttttctg atgtcatcaa cactactccc actagtcaaa agatacctac tcccgctcct
     1561 ccatccgttg cacctcctca aaacaccact tccactcacc ctatgattac gcgtcatcaa
     1621 ctaggcacca ccaaacctgt tcaacgcctt aaccttctct tgtcaaaccc ctctcctaca
     1681 cccaaaacct attcttatgc tctcaatgac cctaattggc atcacgctat gaccgatgaa
     1741 tataatgcgt taattaaaaa tggtacttgg actcttgtgc ctcgcccatc ggacacgaat
     1801 atagttcact ccatgtggtt gtttaagcac aagtttaatg ctgatggtac tttgagtcga
     1861 tataaggcgc ggcttgttgc taacggtcgc agccagcata ttggtattga ttgtgaggag
     1921 acgttcagcc cagttgttaa accgaccact attcggaccg tcctcagcct tgctctttct
     1981 caacattggc ccgttcatca gctggatgtc aagaatgcgt ttctacacgg gcacctttct
     2041 gagacagtct acatgcacca gcctcctggt tttcatgacc ttgcaagccc agatcatgtt
     2101 ttcctcctcc agaagtctct gtatggcttg aagcaggcac ctcgtgtttg gtttcatcga
     2161 tttgcggggt acgcacaatg tgtcggtttt ctgcatagtc ggtgtgtctc ctccctgttc
     2221 atatacaaac agggtactga cattgcttac cttttattat atgtggacga cattattttg
     2281 actgcttcga cgcctgcctt tcttcagcga gtcattgcct ctttacatgc atag
//
LOCUS       XM_071830816             860 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides V-type proton ATPase subunit
            F (LOC139840554), mRNA.
ACCESSION   XM_071830816
VERSION     XM_071830816.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..860
                     /gene="LOC139840554"
                     /note="V-type proton ATPase subunit F; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139840554"
     CDS             99..491
                     /gene="LOC139840554"
                     /codon_start=1
                     /product="V-type proton ATPase subunit F"
                     /protein_id="XP_071686917.1"
                     /db_xref="GeneID:139840554"
                     /translation="MANRAQIPNNNSALIAMIADEDTITGFLLAGVGNVDLRRKTNYL
                     IVDSKTTVKQIEDAFKEFTSRDDVAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKD
                     HPYDPAHDSVLSRVKYLFNTESVAGDRR"
     misc_feature    138..461
                     /gene="LOC139840554"
                     /note="V-type ATP synthase subunit F; Provisional; Region:
                     PRK03957; cl00632"
                     /db_xref="CDD:469852"
ORIGIN      
        1 caacttatat ttattcttta ttatttattt atttttgtta tacttgccga tcatattctc
       61 tgtttctaga ttgattacag ttatatcttt cggatcaaat ggcgaaccga gctcaaattc
      121 ctaataacaa ctcagcacta attgctatga ttgctgatga ggacacgata actggatttt
      181 tacttgctgg agtcggcaat gttgacttgc ggaggaaaac aaattacctc attgtggatt
      241 cgaagacaac tgtcaaacaa atcgaggatg ctttcaaaga attcacttca agagatgatg
      301 tggcaatagt cttgatcagt caatatgttg caaatatgat acggttccta gtcgatagct
      361 acaacaaacc agttccagct attttggaga ttccttcaaa ggaccacccg tatgatcctg
      421 cacatgattc tgtactgtca cgtgtcaagt acctcttcaa tactgaatct gtcgctggtg
      481 acaggcgcta attaaataaa aaaaactttt tgagtgatca gttttcttca acatgaagtt
      541 atgattatct cagcctaact ttaagcacta ttgggtgtaa aattctcgca acaataaaat
      601 gccatctatc atgtaccggg gtgtgggtga gaagagactt gattcgattg atcatataat
      661 ataggtctcc caacatgttg gatggtttga actgttagat cttttgatct tcaactggtt
      721 gtttgtattc ttcgtctcta ttttcctttg taaattagag atataattta atatatttaa
      781 attatataat ttatataaac gaatttggaa tacttgtagt aataaataat caagttatta
      841 cacccagtca tctatggttt
//
LOCUS       XM_071830817             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840556), mRNA.
ACCESSION   XM_071830817
VERSION     XM_071830817.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139840556"
                     /note="uncharacterized LOC139840556; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840556"
     CDS             1..567
                     /gene="LOC139840556"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686918.1"
                     /db_xref="GeneID:139840556"
                     /translation="MACVTSMSFSICVNGDKEGFFKGSRGLRQDDPTSPYVFTLIMEV
                     LSLIMNDCIKENSSFKFHYKCKVSGLLPNINKSTTFFDSVTANIQGKIVQILSFEDID
                     KLLKGFLWSQTDNSEGKAKVAWKGVCVPKDQGGLGLRPLKEWNQTLIVKQIWRIVTNE
                     DSLLSKWVNLIRPKDVRFWDINPGSNDS"
ORIGIN      
        1 atggcatgtg tgactagtat gtctttttca atctgtgtga atggtgataa ggaaggtttc
       61 tttaaaggta gcagaggcct tagacaagat gaccctacgt ctccttacgt gtttaccttg
      121 attatggaag ttttgtctct cattatgaac gactgcataa aagagaatag tagttttaag
      181 tttcattata agtgcaaagt ctctggtttg ttgcccaata taaataaaag cactacattc
      241 tttgatagtg tgacagcaaa tattcaaggt aaaattgttc agatcttatc ttttgaggat
      301 attgacaagt tgttaaaggg atttctgtgg agtcaaactg ataattcaga aggcaaagct
      361 aaagttgcat ggaaaggtgt ttgtgttcct aaagatcaag gggggctggg tttgaggcct
      421 cttaaagaat ggaatcaaac tttaatcgtg aagcaaatat ggaggattgt tactaacgag
      481 gattcattat tgagtaaatg ggtgaatttg attagaccta aagatgttcg cttctgggat
      541 attaatcccg gtagtaatga tagttag
//
LOCUS       XM_071830818            2394 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ent-copalyl diphosphate
            synthase 1-like (LOC139840557), mRNA.
ACCESSION   XM_071830818
VERSION     XM_071830818.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2394
                     /gene="LOC139840557"
                     /note="ent-copalyl diphosphate synthase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139840557"
     CDS             1..2394
                     /gene="LOC139840557"
                     /codon_start=1
                     /product="ent-copalyl diphosphate synthase 1-like"
                     /protein_id="XP_071686919.1"
                     /db_xref="GeneID:139840557"
                     /translation="MTVTCCVFLLFIPAFFFFTNTLVLFLSPLHGSSLLSTISTAQGS
                     LCPEEGNSSQFLQLHIYDTQQITEKPHAVEQITYSITPGVQRKNNLPFVNDQYAVIKY
                     VDSIKSMFALLDEGDISISAYDTAWVALIEEVDGLSGGGPQFPSCLRWIVNHQHPDGS
                     WGEPTLFSAYDKLLNTLACVIALTAWNIHFDKCRKGMKFVEENMNKLGEEKTEHMTPG
                     FEIVFPSLVELAKKFKIKVPTNSPIFNEIIARRDRKLTMIPKDLIHKIPTILLYTLEG
                     MKDLEWGKLLKLQSEGGSFCFSPAATAFAFMQTKDPNCLAYLTNIVAKFNGGVPNIYP
                     IDMYERIWMVDRLQRLGIARYFSSEIKDCVDYIHRHWEEKGIGFVKNCNLPDLDDTSM
                     AFRILRTSGYHISPDVFSHFKEDGNFGCYPKQTTESVTVMLNLHRASHVLFPGEKIME
                     EAKTFSHKYLTEKQSANQLLDKWFIPKDLPGEVRYVLNVPWYASLPRLEARYYVEQYG
                     GDDEIWIGKTLYRLTNVCNNKYLEMAKLDYNNCQTIHQLEWSHIQKWYADLKIDEGLD
                     TKVLWSYYEAAASIFEPERHNERVSWAKTVVLINIITSFFARPQFTNADIKAFSNEFS
                     NPQRHEKDRKPWHVIMNALHKTLKQISSETGVANGEHVYVRLHHAWATWLLSWQKEVD
                     EASGEAELIVQTIIKISDRWSLEETLSHPQYRRMSSITNELFRQLSHKGDHAIGSQIE
                     SKMQELVQLVLCNSPNDLDPDLKQIFLLVAKTVYYRAYFDPKTINLHISKVLFEKVM"
     misc_feature    292..2388
                     /gene="LOC139840557"
                     /note="ent-copalyl diphosphate synthase; Region: PLN02592"
                     /db_xref="CDD:215321"
ORIGIN      
        1 atgactgtta cttgctgtgt atttttgtta tttattcctg cttttttttt ttttacaaat
       61 acattggtgt tgtttctttc tcctttacat ggatcatctt tgttgtctac tatatctact
      121 gctcaaggtt cgctatgtcc tgaggaaggt aattcttcac agtttctaca attacatatt
      181 tatgatacgc agcaaataac agagaaacca catgcagtcg aacaaataac atattcgata
      241 acaccaggtg tacaacgaaa gaacaatttg ccatttgtga atgaccagta tgcagtgata
      301 aagtatgtcg actcgattaa gtcaatgttt gctttactgg acgaaggtga tataagtatt
      361 tctgcttacg acacggcttg ggttgcactt atagaagaag tggatggact aagcggcggt
      421 ggtccacagt ttccatcatg tctacgatgg attgtgaatc atcagcaccc tgatggctca
      481 tggggcgaac caacgctttt ttcggcttat gataagctcc tgaacacatt ggcttgtgta
      541 atcgcactaa cggcttggaa tattcatttc gataaatgtc gaaaagggat gaaatttgtg
      601 gaggaaaaca tgaacaagct tggggaagaa aagactgaac acatgacacc tggttttgaa
      661 atagtcttcc cttcactagt tgaactagca aaaaaattta aaattaaagt accaactaat
      721 tctcccatct tcaatgagat cattgcaaga cgagaccgaa agctcacaat gataccaaag
      781 gatctaattc acaagatacc aacaatcctg ctttatacct tggaaggaat gaaagatttg
      841 gaatggggca agcttctaaa acttcaatcg gaaggaggat ctttctgctt ttcaccggca
      901 gcaacggctt tcgcattcat gcaaacgaaa gatccaaatt gtcttgcata tttgaccaac
      961 attgttgcca aattcaatgg aggagtccct aatatatacc ctatcgacat gtatgaacgg
     1021 atttggatgg ttgaccgctt gcaacgcctt ggaattgcac gttatttttc ttccgagatc
     1081 aaggattgtg ttgactatat acacaggcat tgggaagaaa aaggcattgg gtttgttaaa
     1141 aattgcaatc taccggatct tgatgacact tcaatggctt ttcggatttt aagaactagt
     1201 ggctatcata tttctcctga cgtattttcg cactttaagg aagatggaaa tttcgggtgt
     1261 tatccgaaac aaacaacaga atctgtgaca gttatgctca atctacatcg agcttctcac
     1321 gtgctttttc ccggagagaa aatcatggag gaagccaaga ctttttctca taaatacttg
     1381 actgaaaaac aatcggccaa tcaacttttg gacaaatggt tcattccgaa agacttgccg
     1441 ggagaggttc gatatgtgct gaatgtgcca tggtacgcta gcttacctcg cctcgaggca
     1501 agatattatg tggaacaata tggaggagat gacgaaattt ggattgggaa aacgctttat
     1561 aggttgacta atgtttgcaa taataaatat ctagagatgg ccaaattgga ctacaataat
     1621 tgtcaaacaa ttcatcagtt ggagtggagc catattcaaa agtggtatgc ggatctaaaa
     1681 attgacgagg gcttagacac aaaggttcta tggtcatatt atgaggcagc cgcgagcata
     1741 ttcgaaccag aacgacacaa tgagcgagtt tcttgggcca aaacagttgt gctaatcaac
     1801 atcattacct ccttttttgc cagaccccaa ttcacgaacg ctgacattaa agcattttca
     1861 aacgagttct caaaccctca acgccatgaa aaagatagaa aaccttggca cgtgataatg
     1921 aatgcgctgc acaaaactct caaacaaatc agttctgaaa caggggtagc taatggtgaa
     1981 cacgtctatg tacgcctaca ccatgcttgg gcaacgtggc tcttgagttg gcaaaaagaa
     2041 gtggatgaag cgtcaggaga agccgaactt attgttcaaa caataattaa gatcagcgat
     2101 cgatggtcac ttgaggagac gttgtctcac cctcaatatc gacgaatgtc ttccatcaca
     2161 aacgagcttt ttcgccaatt atctcacaag ggcgatcatg caataggctc tcagatagag
     2221 tccaaaatgc aagaacttgt gcaactagta ctctgcaact caccgaacga tcttgatcct
     2281 gatttgaagc agatattttt acttgttgcc aaaacagttt actacagagc ctactttgat
     2341 cctaaaacta taaacctcca cattagcaaa gtattatttg aaaaggtgat gtga
//
LOCUS       XM_071830819             423 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840558), mRNA.
ACCESSION   XM_071830819
VERSION     XM_071830819.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..423
                     /gene="LOC139840558"
                     /note="uncharacterized LOC139840558; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840558"
     CDS             1..423
                     /gene="LOC139840558"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686920.1"
                     /db_xref="GeneID:139840558"
                     /translation="MEVWVRIFNWWGLGNVSTLSIYDIFKSYSPLDSSNNSIILWHVV
                     KWASSYLIWKYRNHKVFRNKVASSPNVLNEIQSTSYEWITRRSKKYKFDWNQWFTNPS
                     FCGYMTAARMVSDNCFQFCFGSVSRIWCLGACYFGLAM"
ORIGIN      
        1 atggaggttt gggttcgtat ttttaattgg tggggacttg gtaatgtatc cacactctct
       61 atatacgaca tcttcaaaag ttactctcca cttgatagtt caaacaatag cataattctt
      121 tggcatgtgg taaaatgggc tagtagctat ctaatatgga aataccgaaa tcataaggtt
      181 tttcgtaata aggtagcgtc tagtccaaat gtactcaacg agattcaatc tacgagctac
      241 gagtggatca ccagaagatc gaagaagtac aagttcgatt ggaatcaatg gttcacgaat
      301 ccaagtttct gtgggtatat gactgcagct aggatggtgt cggataattg ctttcaattc
      361 tgttttgggt ctgtttcgcg gatatggtgc ttaggtgcct gctacttcgg gcttgcaatg
      421 taa
//
LOCUS       XM_071830822             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840559), mRNA.
ACCESSION   XM_071830822
VERSION     XM_071830822.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139840559"
                     /note="uncharacterized LOC139840559; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840559"
     CDS             1..750
                     /gene="LOC139840559"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686923.1"
                     /db_xref="GeneID:139840559"
                     /translation="MAKSTLYGIGVNAQDVENIAMALGCKSGSLPILYLGLTVGSKLK
                     KLNDWKPVIDKFNTRLTGWKARSMSFGGRLILIKSVLSSLPLYFFSLYRAPTGIINLL
                     ESMRRKFFWGGAGDSSKMAWVKWDDILVPYESGGLNVGSLKAKNLALTSKWWWHFRVE
                     SGALTLFGRSEADRVHSLLASVSLNNGSPDTWKWALNDKGHSKTSIMASEMDEKLLQN
                     GYQPSETVRNKLAPKKIEIFAWRAIRRRLPT"
ORIGIN      
        1 atggcgaaaa gcactctata cggtattggt gttaacgctc aagatgtaga aaacattgcc
       61 atggccttag gctgtaaatc aggttcactt ccaattttgt acctcggtct tacggtggga
      121 tcaaaattga agaaactaaa tgattggaaa ccggtaattg ataaattcaa cacaagactc
      181 acggggtgga aggctagatc gatgtctttc gggggtaggt taattctcat taaatcggtc
      241 ctctcaagcc ttccgttgta ctttttctcc ctttaccgag ctcctacggg tatcatcaat
      301 cttctcgaga gcatgagacg taagttcttt tggggcgggg cgggtgactc atctaaaatg
      361 gcttgggtta aatgggacga tatcttagtc ccttacgagt cgggcgggtt aaacgttggt
      421 tctttaaagg caaaaaactt ggctctaact agtaaatggt ggtggcattt tcgggttgaa
      481 agtggggcat taacattatt cggtagatca gaggcagatc gtgtgcactc gttactagcg
      541 agcgtttctc tcaacaacgg ctctcctgat acgtggaagt gggctttgaa cgataaaggg
      601 cactccaaaa ctagcatcat ggcgtccgag atggatgaga aactacttca gaatggttat
      661 caaccttcag aaacagtgcg caataaacta gctccaaaaa aaattgagat attcgcttgg
      721 cgagccatac gtagaaggct acctacctga
//
LOCUS       XM_071830823            2415 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ent-kaurene synthase 1,
            chloroplastic-like (LOC139840560), mRNA.
ACCESSION   XM_071830823
VERSION     XM_071830823.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2415
                     /gene="LOC139840560"
                     /note="ent-kaurene synthase 1, chloroplastic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840560"
     CDS             1..2415
                     /gene="LOC139840560"
                     /codon_start=1
                     /product="ent-kaurene synthase 1, chloroplastic-like"
                     /protein_id="XP_071686924.1"
                     /db_xref="GeneID:139840560"
                     /translation="MAYSTSSVMGVPLSLTTRQSSLVVSCCIERHNSSTFHAGKANFV
                     VRRFCIKSSSQSRQANLSFLNLQMTKERIRKLFNNVELSVSSYDTAWVAMVPSPNAPK
                     SPCFPECLNWLKDNQLDDGSWGLVQSNSPILVKDALSSTLASVVALKRWNVGEDQINK
                     GLRFIQLNSDFATDYNQPSPVGFDIIFPGMLEYAKLLNLNLPFKQEQVNLLLHVRDSE
                     LNRCDLEQREVYLAYISEGLNKSYDWSMINKYKMKNGSILNSPSATAAALIHHQDAGC
                     LNYLTSVLDKFGNAVPTAYPLELYIRLFMVDTLERLGVTRHFRVEIQNVLDEMYRYWL
                     QRDENIFMDVGTCALACKVLRTNGYEVSLDNLNDVTEEGDESLEGYKASQINYQQDSS
                     LRNENLASIEFLTRKLYTASNNLSEFIREEVENPYRFSFHSDLERISTRSNIKQYIVD
                     DTRTLKTTYRSSNISNEDFLRLAVEDYNACQSIYREELKGVERWVEENSLNKLDFARQ
                     YAINCYFLAALTFSSPELSDARISFAKSSTLIGVVDDFFDVHQGSTDELVNLTRAVQK
                     WNVDVDTYCCSEEVRIIFLAIKDIVNGIGDMAYKWQQRDVTSHVIKTWCDMVKSMLTE
                     TIWARDSLVPTMQEYMENGYVSFAAGPSLLHALYLIGPKLSEEAVQSADYHKLYELLS
                     THGRLINDIRSFKRDMEAGRLNVVSLYNNHKVSGIKKEEVIEVIRMLINNHERKLLNL
                     VSKEKSNSIPRACKDAIWKMCNVVNLLYSKDDGFIENPIIENIVNEIIYKPVSHTLIN
                     ETNEDL"
     misc_feature    148..2331
                     /gene="LOC139840560"
                     /note="ent-kaur-16-ene synthase; Region: PLN02279"
                     /db_xref="CDD:177918"
ORIGIN      
        1 atggcatata gcacatcatc tgttatggga gtacctttgt cattaacaac acgccagtcg
       61 tcgttggtag ttagttgttg catagagcga cacaactcgt caacctttca cgctggtaaa
      121 gcaaatttcg tcgttcgaag attttgcatc aaatcttctt cacagtctag acaagcaaat
      181 ctcagttttc tgaaccttca aatgacgaaa gaacgaataa ggaaattgtt caacaatgtg
      241 gagctctctg tttcatcata tgacacagcc tgggtagcca tggtcccttc tccaaacgca
      301 cccaagtccc cttgtttccc tgagtgccta aattggttaa aggataatca gcttgatgat
      361 ggttcatggg gtctagttca aagtaattca ccaatacttg ttaaagatgc actatcttcg
      421 acattagcaa gtgttgttgc gttaaaacgg tggaacgttg gggaagatca aatcaacaag
      481 ggtttacgtt ttatacagtt aaatagtgat tttgctaccg attacaatca accatctcca
      541 gttggttttg atatcatatt tcctggtatg cttgagtacg cgaaactttt gaacttaaat
      601 ctccctttca aacaagaaca agtgaatctt ctgctacatg tgagagactc ggagttaaac
      661 agatgtgatt tagaacagag ggaagtttat ttagcatata tttcagaagg actcaataag
      721 tcttatgatt ggagcatgat aaataaatat aagatgaaaa atggttctat tttaaactcg
      781 ccatcggcaa cagcggcagc tcttattcat catcaagatg ctggttgtct taattattta
      841 acttcagttt tggacaagtt tggaaatgct gttccgacag cttaccctct agaactatat
      901 atccggcttt tcatggttga cacacttgaa agattgggcg tcacacgaca tttcagggtg
      961 gaaattcaaa atgttttaga cgaaatgtac agatactggc tacagcgtga cgaaaatata
     1021 ttcatggacg ttggcacttg tgctctagca tgtaaagtat taaggactaa tggttatgaa
     1081 gtatccttag ataacttgaa tgacgtcaca gaagaaggag atgaatcttt ggaagggtac
     1141 aaggcatcac agatcaatta tcaacaagat tcttctttac gaaatgaaaa cttggcgtcg
     1201 attgaatttc ttacaaggaa attatacact gcttctaaca acctcagtga atttattcgc
     1261 gaagaggtgg aaaaccctta taggttctcc ttccattccg atttggaacg catttccaca
     1321 agaagtaata taaaacaata tattgtagac gatacaagaa ctttgaaaac tacatatcgt
     1381 tcatcaaaca ttagcaatga ggatttccta aggttagcag tggaagatta taatgcatgt
     1441 caatctattt atcgtgaaga acttaaaggt gttgaaaggt gggtggaaga aaatagtttg
     1501 aacaagcttg attttgcaag gcagtatgca atcaattgtt acttccttgc tgctttaact
     1561 ttctcctctc ccgaattatc ggatgctcgt atttcatttg ccaaaagtag cactctcatt
     1621 ggagtggtcg atgacttttt cgatgtacat caaggatcaa cggatgaatt ggtgaatcta
     1681 actcgtgccg ttcaaaaatg gaatgtggat gttgacactt attgttgttc agaggaagtt
     1741 cggattatat ttttagcaat taaagacatt gtcaatggaa ttggagacat ggcttataaa
     1801 tggcaacaaa gagatgttac aagtcatgtt attaaaactt ggtgtgatat ggtgaagagt
     1861 atgttaacgg aaactatatg ggcacgtgat agtttggtgc ctacaatgca agaatacatg
     1921 gaaaatggtt atgtatcatt cgcagcgggt ccatctttac tccatgctct ttacttaatc
     1981 gggccaaagt tgtcagagga ggctgttcaa agtgctgatt atcacaaatt atatgagcta
     2041 ttaagtactc atggtcgact tataaatgat attagaagtt ttaagagaga catggaggca
     2101 ggaagattga atgttgtgtc attgtacaac aatcataaag taagtgggat caagaaagaa
     2161 gaggtgatag aggtgattag gatgttgatc aacaatcatg agagaaagtt attgaattta
     2221 gtttcgaaag aaaaaagcaa cagtattcca agagcttgca aagatgcaat atggaagatg
     2281 tgcaatgtgg taaacctttt atactcgaaa gatgatggat tcattgaaaa tccgatcatt
     2341 gaaaatatcg taaatgaaat tatatataaa ccggtttctc acacgttgat aaatgaaacc
     2401 aatgaagact tgtaa
//
LOCUS       XM_071830824            1107 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            TCP18-like (LOC139840561), mRNA.
ACCESSION   XM_071830824
VERSION     XM_071830824.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1107
                     /gene="LOC139840561"
                     /note="transcription factor TCP18-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139840561"
     CDS             1..1107
                     /gene="LOC139840561"
                     /codon_start=1
                     /product="transcription factor TCP18-like"
                     /protein_id="XP_071686925.1"
                     /db_xref="GeneID:139840561"
                     /translation="MYPSSNNTLPQDNYHTQSFSSSSSFVLPLEDEAVFCEFLKQQQF
                     SFNDNNYHNSIMQAHEMTNNIDLTMGECSNNVENVAMINGDDDQWDGNINTQMEPESS
                     SPRKKSSKQDRHSKINTARGPRDRRMRLSLDVAKKLFGLQDLLGFDKASKTVDWLLNK
                     SKSSILELLPDPSSSFMGASNSASSTSDQCEILSETVDQSMVKTTADDDDDDDTKATE
                     NKAKKQKEKINNKGVIRRYADFHHPLAKETRERARVRARERTILKRDKKLGGDDHDQV
                     SMFRPFLNQDVNQLGLIWSPTEESQRQRNEQQPMSLNLQTNPGFVADNSSLLMTGNWS
                     PNYLFNYHHKFGQHEHDQLNDYQLYGKAWEGNYN"
     misc_feature    334..741
                     /gene="LOC139840561"
                     /note="TCP family transcription factor; Region: TCP;
                     pfam03634"
                     /db_xref="CDD:460998"
ORIGIN      
        1 atgtatcctt cttcaaacaa cacactccct caagataatt atcatactca atctttttct
       61 tcttcttctt cctttgtcct tcctttagaa gatgaagctg tattttgtga gttcttaaag
      121 caacaacagt tttcctttaa tgataataac taccacaatt caatcatgca agcacatgag
      181 atgactaata acattgactt aacaatggga gaatgtagta acaatgtaga aaatgttgct
      241 atgattaatg gagatgatga tcaatgggat ggtaatatta atactcaaat ggagcctgaa
      301 agtagtagtc caagaaaaaa gtcttcgaaa caagatcgtc acagcaagat taacactgcc
      361 cgaggcccta gagatcgaag aatgaggttg tcccttgatg ttgctaaaaa gttatttggg
      421 cttcaagacc tgctagggtt tgataaggct agtaagacag ttgattggct actaaataaa
      481 tcgaagtcat cgattttaga acttcttcct gatccaagta gcagctttat gggtgcatcc
      541 aacagtgcat cttctacttc agatcaatgt gagattctgt ctgaaactgt tgatcaatct
      601 atggtaaaga ctactgcaga tgatgatgat gatgatgata caaaagctac agaaaataag
      661 gcaaaaaaac aaaaagagaa aattaataat aaaggagtaa ttagaagata tgcagatttt
      721 caccaccctc ttgcaaaaga aacaagagaa agggctagag taagagcaag agagaggaca
      781 atcttaaaga gagataaaaa acttggtggt gatgatcatg atcaagtttc aatgttcaga
      841 ccatttttaa atcaagatgt gaaccagtta ggattaattt ggagccctac cgaagaaagt
      901 caacgtcaaa gaaacgaaca acaaccgatg agcttaaact tgcaaaccaa cccaggattt
      961 gttgctgata attcttcatt gttgatgaca ggcaattgga gccctaacta cttgtttaac
     1021 taccaccaca agtttggaca acatgagcat gatcaattga atgactatca gttatatggt
     1081 aaagcatggg aaggcaatta caactag
//
LOCUS       XM_071830825            1515 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 6,7,8-trihydroxycoumarin
            synthase-like (LOC139840562), mRNA.
ACCESSION   XM_071830825
VERSION     XM_071830825.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1515
                     /gene="LOC139840562"
                     /note="6,7,8-trihydroxycoumarin synthase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840562"
     CDS             1..1515
                     /gene="LOC139840562"
                     /codon_start=1
                     /product="6,7,8-trihydroxycoumarin synthase-like"
                     /protein_id="XP_071686926.1"
                     /db_xref="GeneID:139840562"
                     /translation="MISFLIMLSISPLIFCFIFIILPKFRNFSLKNCRPLPPGPPGLP
                     IIGNLHELDTSNLSHNLWRLSKHYGPLMSLRLGFVQTLVVSSAAMAKEVLKTKDLIFC
                     NRPLLTGLQKLSYDNKDIVFSPYNEYWRQMRKTCTLHLFSMKQVNSFRYIREEEVFKM
                     IGSLKTRVSTKQVVNLSEILMILTSNITYRMAFGKRPFTYDAEKKEMARFHELLLQCQ
                     ASFANFYYRDHFPLMGWLDKLNGSIAKLENTFKDMDELYQDLIDEHINQKKQNNMQED
                     MVDILLKLKEDKDSYLTFEHIKAVLMNILLGGIETSASTVEWAMTLLIKNPNLLKKVQ
                     QEVRNVVGNKGRVHEDDLYNLEYLKAVIKETLRLHPVVPLLIARESRDTCVLDKYEIP
                     KKTLVYVNAWAIGRDPKCWDRPDEFDPERFIESGIDYKGSNFELIPFGSGRRGCPGIS
                     LGVTTVELALANLVYMFDWKLPDEMKDIDTLTTPGTVSHKKHSLRLFANKVYSS"
     misc_feature    202..1482
                     /gene="LOC139840562"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; Region: CYP71-like; cd11072"
                     /db_xref="CDD:410695"
     misc_feature    order(310..312,385..387,397..399,421..423,562..564,
                     910..912,919..924,931..936,1111..1113,1123..1128,
                     1132..1134,1312..1323,1330..1344,1351..1356)
                     /gene="LOC139840562"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410695"
     misc_feature    order(649..651,661..663,736..738,907..909,916..921,
                     1126..1128)
                     /gene="LOC139840562"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410695"
ORIGIN      
        1 atgatctcat ttcttatcat gctatcaata tcacctctca ttttttgttt catattcatc
       61 atccttccca aatttagaaa cttttcgtta aaaaactgcc gccctcttcc gccaggacct
      121 cctggacttc ccataattgg aaacctacac gaactcgaca cgtcaaacct atcacacaac
      181 ttatggcgtc tttcaaaaca ttatgggccg ttaatgtcct tacgtcttgg tttcgtccaa
      241 accctagttg tttcgtcagc cgcaatggct aaagaagtgt tgaaaaccaa agatttgatc
      301 ttttgcaaca ggcccttgtt aaccggccta caaaagttat catatgacaa taaagatata
      361 gtcttttcac cttataatga gtattggaga caaatgagga aaacttgcac acttcatttg
      421 ttttcgatga aacaagttaa ttcatttcgt tatattcgtg aagaagaagt gtttaagatg
      481 attggttcat tgaaaactcg agtttcaact aaacaagtag taaatttgag tgaaattttg
      541 atgattttaa caagtaatat tacatataga atggcttttg gaaaaaggcc atttacttat
      601 gatgccgaaa agaaagaaat ggcgcgattt catgagcttt tgttacaatg tcaagcctcg
      661 ttcgctaact tttattatcg agatcatttt cctttgatgg gttggcttga taaactcaat
      721 ggaagtattg ctaaacttga aaacaccttt aaagacatgg atgagttgta tcaagatctc
      781 attgatgagc atataaatca gaagaaacag aataacatgc aagaggacat ggttgatatc
      841 ttacttaaac tcaaggaaga taaagattct tatcttactt ttgaacatat caaagcagtg
      901 ctcatgaata tattgctagg agggatagaa acaagtgctt caactgtgga atgggcaatg
      961 actttgttga tcaagaaccc aaatttgtta aagaaagttc aacaagaagt gaggaacgtg
     1021 gttggaaaca aaggaagagt gcacgaagac gatctctata acctcgaata tctgaaagct
     1081 gtaatcaaag agacacttag attacaccca gttgtaccac ttttaatcgc acgtgaatca
     1141 agagacacat gtgttttaga caaatatgaa ataccgaaaa agactctagt gtacgtgaac
     1201 gcatgggcca taggtcgaga ccctaaatgt tgggatcgac ccgatgagtt tgatccagag
     1261 aggttcatag aaagtggtat tgactacaaa ggttcaaatt tcgagttgat cccatttggt
     1321 tctggtcgaa gagggtgtcc tggaatatcg ttaggagtta cgacagttga attggctctt
     1381 gcgaatcttg tttacatgtt tgattggaag ttacctgatg aaatgaaaga tatcgatact
     1441 ttaacgactc ctgggaccgt ttcacataag aagcattcgc ttcgattatt cgctaataaa
     1501 gtgtatagta gttag
//
LOCUS       XM_071830826            1525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840563), mRNA.
ACCESSION   XM_071830826
VERSION     XM_071830826.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1525
                     /gene="LOC139840563"
                     /note="uncharacterized LOC139840563; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840563"
     CDS             644..1525
                     /gene="LOC139840563"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686927.1"
                     /db_xref="GeneID:139840563"
                     /translation="MPVYFVSKTLTSSEVNYSPIEKLVYALVHTARRLRRYFQAHPIV
                     VLTDQPIKQVLYKPEISGRMAKWAVELGEHEINFSSRSAVKGQILADYLAEIPADVEA
                     SAEHQDPPAPVLSPWELYTDGACSASGAGAGVILTGPGGEEHTYALRFNFAVTNNEAE
                     YEALLAGMRIAHKLNVKILHAYVDSKLVCNQVCGDFEAHDIAMQQYLSLVHNLADQFE
                     AFQISHVMRGQNKKADALSKLAALAFDHMARPVARGTLQGRFAARMQIAPQHFLRRTG
                     KVGGGWQHGSCLAEEVM"
     misc_feature    <647..862
                     /gene="LOC139840563"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    992..1366
                     /gene="LOC139840563"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(1007..1018,1106..1114,1121..1123,1193..1195,
                     1313..1315,1355..1357)
                     /gene="LOC139840563"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 cgggcgcgac ctatcagcgt gtaattgacg cagcattcaa gcctcaaatt ggcagaaatc
       61 ttgaagcgta tgtcgatgac ttggtaatca aaagcaacac cgaagaagac atgctcgcag
      121 acatcctaga aacgtttgcg tctctgcgaa ggatcaacat gaagcttaat ccgcttaaat
      181 gtagctttgg agaggaggaa ggcaagtttc taggtcatgt ggtgacagcg cggggtatca
      241 aggctaatcc caaaaagatt gaagctattg ataatttacc atctccgaaa acaaagaaag
      301 atgtgcagag tctcactggg aagctcgcag caatcacgcg gtttttgtca aaagccgcag
      361 agcgtcagct accattcttt agcactttga aaaactgttt gaagaaaaag gattttgtct
      421 ggactcagga agcagaatca gcctttcagg agatgaaaaa ggtgcttgca gagttaccaa
      481 cacttactgc gccagtccct ggggagacgt taacgctgta ccttgcggca tcaaaggaag
      541 caatcagttc agttctcatc gcagaccgcg aaaaggtaac ttatcaattt acttgcatta
      601 tttatttcgc agaactttaa cgctgaggtt ttctcagaca caaatgccgg tctacttcgt
      661 aagcaagacg ctgacatcaa gcgaagtaaa ctactcgcca atagagaagt tagtatatgc
      721 gcttgtccat acagcgcggc gtttacgccg atactttcaa gcacatccga ttgtggtttt
      781 aactgatcag ccaatcaaac aggtactgta caagcccgag atttctggcc gaatggccaa
      841 gtgggcagtc gaattgggag aacatgaaat aaacttttct tcacgcagtg cggttaaggg
      901 tcaaatactt gctgactacc tagcagaaat acctgcggat gtcgaagcgt cagcagaaca
      961 tcaagatccg cccgcacctg ttctatcacc atgggaatta tacaccgatg gtgcgtgtag
     1021 cgcatctggc gcaggcgcag gtgtaatttt gacaggtcca ggcggtgagg aacatacgta
     1081 cgcactgcgg tttaattttg ctgtcacaaa caatgaagca gagtatgagg ctctgctagc
     1141 aggtatgcgc atcgcgcata agctaaatgt taaaatcttg cacgcttacg tggattcaaa
     1201 gctagtatgc aatcaagtct gcggagactt cgaagcgcac gacattgcta tgcagcaata
     1261 tttatcgctt gttcataatc tcgctgacca gttcgaggct tttcaaatct cgcacgtaat
     1321 gcgggggcaa aataagaagg cggatgcgct aagcaaacta gctgccttgg cttttgatca
     1381 tatggcgcgg ccagttgctc gcggaactct gcagggaaga tttgctgcaa gaatgcagat
     1441 tgctccgcag cattttctgc ggaggactgg caaagttggc ggaggttggc aacacggaag
     1501 ctgccttgcg gaggaggtaa tgtag
//
LOCUS       XM_071830827             549 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840564), mRNA.
ACCESSION   XM_071830827
VERSION     XM_071830827.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..549
                     /gene="LOC139840564"
                     /note="uncharacterized LOC139840564; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840564"
     CDS             1..549
                     /gene="LOC139840564"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686928.1"
                     /db_xref="GeneID:139840564"
                     /translation="MPALDDEEKKLLKQCVNAQLVHRSYGNVMLRLGKISAYWPWEDV
                     RPAIVGPDGKEMRMKKVLTAEEIAGISFRKQDVDKQLEQAAASEHVEESPAESGNKRK
                     AAGTSEAQKKKKKTPKQLEDMRNDNFVAIEPRSADLPPPINGERLFFRIACGGDAANN
                     TAGQPRAAGHCHIQRQGDPRRV"
ORIGIN      
        1 atgccggcgt tggatgacga ggagaaaaag ttgttgaagc agtgcgtcaa cgcacaactg
       61 gtgcaccgtt cgtatggtaa tgttatgctg cggttgggga agatctccgc gtattggcct
      121 tgggaggatg tgcggccggc catagttggc cccgatggaa aggagatgag gatgaagaag
      181 gtgcttaccg cggaggagat tgctgggatc tctttccgca agcaggatgt ggacaaacag
      241 ctagagcagg cagctgctag cgaacatgtg gaggaatcgc cggcggagtc aggcaataaa
      301 cgcaaggcgg ctgggacgtc cgaggctcag aagaagaaga agaagactcc taagcagctg
      361 gaggatatgc gcaacgacaa ttttgttgcc atcgagccgc ggtccgcaga cctacctccc
      421 cccattaatg gtgagcgttt attttttcgc atagcatgtg gaggagacgc agccaacaac
      481 accgcaggtc aacctcgagc tgcaggccac tgccacatcc aaagacaagg cgatccccgt
      541 cgagtctga
//
LOCUS       XM_071830829             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139840566), mRNA.
ACCESSION   XM_071830829
VERSION     XM_071830829.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139840566"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840566"
     CDS             1..627
                     /gene="LOC139840566"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071686930.1"
                     /db_xref="GeneID:139840566"
                     /translation="MLEAVASYDMWIWHAFFGMAGSNNDINVLNHSPLFDSLRKDRAA
                     PSPFEVNGNQYPFGYYLADGIYPDWTTLIKGYTTPIEEPRKNFTKFQSSARKDVERTF
                     GVLQGRFAILKTPARVMSVNKMRRIMYSCIVMHNMIKKDNGFALSTWEQEWLDKPENR
                     PRRNIWRRVKDRRSREKEIRDRDVHDQFREDLTAHIWNLPPNFRSMHN"
     misc_feature    <4..429
                     /gene="LOC139840566"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcttgaag cggttgcttc atacgatatg tggatatggc atgcgttttt tgggatggcg
       61 ggttcaaaca atgacattaa tgtgttaaat cattctccgt tgtttgattc ccttcgtaag
      121 gatagagccg caccttcacc gtttgaagta aacggaaacc agtatccctt tggttactac
      181 ttggcggacg ggatatatcc cgattggaca acactaataa aggggtatac gactcctatt
      241 gaagagccta gaaaaaattt tactaaattt caatcgagtg ctagaaagga tgttgagcgt
      301 acatttggtg ttttacaagg tcggtttgcg attttaaaaa caccggcacg agttatgagt
      361 gttaataaga tgagaaggat aatgtatagt tgtattgtta tgcacaacat gataaagaaa
      421 gataacgggt ttgcgttaag tacttgggaa caagaatggt tagataaacc cgaaaaccgg
      481 cctcgtcgca atatttggag aagggtcaaa gatcgtcgat cacgagagaa agagattcgc
      541 gatcgagacg tgcacgatca atttcgtgaa gatttaacgg ctcatatttg gaacctcccg
      601 ccaaactttc gctcgatgca taactag
//
LOCUS       XM_071830830            3402 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840567), mRNA.
ACCESSION   XM_071830830
VERSION     XM_071830830.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3402
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3402
                     /gene="LOC139840567"
                     /note="uncharacterized LOC139840567; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840567"
     CDS             1..3402
                     /gene="LOC139840567"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686931.1"
                     /db_xref="GeneID:139840567"
                     /translation="MPILPSSKDKSEDDSLAAFSEVMDNMVGIWPNIYLKRKSEAHLY
                     EPKLLIVRVRWALEGDENSKFFHSIIRNRYNKTNIRGLNIEGLWNENRQDIKREAFNH
                     FKRIFNEPDTMRPSMEGLLYPSISSDEAVALELPIAESEIHEAILECGSTKAPGPDGF
                     NMRFFKKCWDIVKDDLVEAIKWFWEHGEISRGCNASFVTLVPKKSDPVGLGDFRPISL
                     IGSYYKIVSKILSNRLRKVLPKLVSSEQSAFLKGRFILDGALIANETIDFLKFKKRKG
                     VIFKVDFEKAFDSLNWNFLLEVMRCMGFGSKWIKWISSCLMSASISILINWSPTDEFL
                     LGRGVRQGDPLSPFLFILAAEGLNILTKTAIDRGLFKGIEVGEDKVLVSHLQYADDTI
                     FFGEWGSSNALNLCNLLKCFELSSGLKVNFQKSCLYGVGVDFEEVSRTARHIGCNVGK
                     FPFIYLGLPIGAKMNKLISWDPVLEKFKNRLASWKMRPLSFGGRLVLIKSVFNSLLLY
                     YFSLFRAPPCVLKFLEKVRRVFFWGNSGSGNKISWVKWENVLHNFGNGGLNIGTLKGK
                     NLALLGKWWWRFKTETDSFWAKIIHSIYGLDGGLVVEDGLSRSPPLSLWSNIVSAGYS
                     LDELQVAFRNSFIKTIGDGGSTSFWTEHWIGEDKLCNIYPRLFRLETQQSVCVRDRVK
                     KEEGDTITSWNWSRIPSGRTASELDSLTVLLRAYDFSSDSKPDSWSWTLDRKGLFTVK
                     KLTSLIDDQVLCHFSSNQPTIRNILVPKKVEIFIWRLLKKRVPVKAELDKRGIDLHSL
                     RCPLCDDDLETIDHSFLQCKQVIDVWVRVHNWWGVNYQAYSSISDLLGSSTYSSTTTF
                     GGLLWQSIKWVTTYHIWKYRNNSRLNAISIVKPPYRVRFQGKTSATFETHEMDRILRE
                     IIRARDKPITFDELHDKLVDFEMQQKKSTHVTPVVIPIVNYTQRGHRQSSNRNHYSRG
                     SYSQHRYNNSNHANSSLEPSSMDCRSLAWFLKENAITPVAYHTAASSSSTPSWILDIG
                     SSHHVTANTSNLQSFSDYGVPEEIILGDGSGLPISHIGNTTIKTSSYLFKLNDILCAP
                     NSRTNLIYVARFCRTNNVYLNFFSVALLGEGSEHGGTFVSRSMQK"
     misc_feature    583..1380
                     /gene="LOC139840567"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(844..861,1021..1026,1159..1161,1165..1170,
                     1366..1371)
                     /gene="LOC139840567"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(844..861,1021..1023,1165..1167)
                     /gene="LOC139840567"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1024..1026
                     /gene="LOC139840567"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <2296..2451
                     /gene="LOC139840567"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcctatcc tcccgagttc taaagataaa tccgaggacg attctctagc ggctttcagc
       61 gaggttatgg acaatatggt gggcatatgg cccaatattt atttaaaacg aaaatcagaa
      121 gctcatttat atgagccaaa acttttaata gttagagttc gatgggctct cgagggagat
      181 gagaactcaa aattttttca ctccatcatt cgaaacaggt acaacaaaac caatattcga
      241 ggactcaata tcgaaggctt atggaatgaa aatcggcagg atatcaaacg ggaggctttt
      301 aatcacttta agagaatttt caacgaacct gatacgatga gaccttcgat ggaagggctg
      361 ttatatccct cgatttcttc agatgaagcc gtagctctcg aacttcctat agcagaatca
      421 gaaatacatg aagctatttt agagtgtggg agtacgaaag ctccgggccc ggacggcttt
      481 aatatgcgct tttttaagaa gtgttgggat attgttaaag atgacttggt tgaggcaatc
      541 aaatggtttt gggaacatgg tgaaatctcg agagggtgta atgcatcatt cgttacactc
      601 gtacctaaga agtcggatcc ggtcgggctt ggtgactttc gtccaattag cttaattggt
      661 agctattata agattgtatc caagatccta tcaaaccgtc ttcgaaaggt cctacctaag
      721 ttggtgagtt cggagcagag tgcctttcta aaaggtcgtt ttattcttga tggcgcctta
      781 attgcaaacg aaactattga tttcctcaaa ttcaaaaaaa gaaaaggtgt tatttttaag
      841 gttgactttg aaaaagcatt tgatagtctc aattggaatt ttctgttaga agttatgaga
      901 tgcatggggt tcggaagtaa atggatcaaa tggatttctt cttgccttat gtcggcctcc
      961 atttccatct tgatcaactg gtcgccaact gatgaatttc tgttgggtag gggcgttcga
     1021 cagggtgacc ctctatcacc tttccttttc atccttgcgg cggaggggtt gaatattctt
     1081 actaaaacgg ccattgacag aggtttattt aaagggattg aagtcgggga ggataaagtt
     1141 ttagtctcac acctacaata tgcggatgac actatctttt tcggggaatg gggaagttct
     1201 aatgcactta atctttgtaa tctcctaaaa tgttttgaat tatcatcggg tctaaaagtc
     1261 aactttcaaa aaagttgttt atacggggtt ggtgtggatt ttgaagaagt aagccgtacc
     1321 gctagacaca tcgggtgcaa tgtggggaaa ttccccttta tttacctagg gttaccaatc
     1381 ggggctaaaa tgaataaatt gattagttgg gacccggtac ttgaaaaatt caaaaatagg
     1441 cttgcgagtt ggaaaatgcg tccgctttcc tttggaggaa gattggttct aattaaatcg
     1501 gtttttaata gtcttctgtt gtactatttt tcgttatttc gtgctccgcc ttgtgtgtta
     1561 aaatttcttg agaaagtgag gagagtgttc ttttggggta attcgggttc gggaaataaa
     1621 atatcttggg tgaaatggga aaatgtttta cacaattttg ggaatggggg gttaaatatc
     1681 ggtaccttaa aagggaaaaa cttggccttg ttggggaaat ggtggtggag gttcaaaacc
     1741 gaaaccgatt ccttttgggc caaaattatt catagtattt atgggttgga cggtggctta
     1801 gtggttgagg atggtctatc acgttctccg ccactaagtc tatggagtaa cattgttagt
     1861 gcaggttact cattggatga acttcaagtg gcgtttcgaa actcctttat caagactatc
     1921 ggtgacggtg gttcgacttc attctggact gagcattgga ttggagaaga caaactgtgt
     1981 aatatttatc cacgtttatt caggctagaa acgcagcagt cggtatgtgt tcgagatcgt
     2041 gttaaaaagg aagaagggga caccattact tcgtggaact ggtcaagaat tccatcagga
     2101 agaacggcat ctgaacttga ttcgctgact gttctgttac gggcctacga tttcagcagc
     2161 gacagcaaac cagattcttg gagttggacc ctcgatcgta aaggtttatt cactgtcaaa
     2221 aagctcacct cattaattga tgatcaggta ctctgtcatt tcagctcgaa tcaacctaca
     2281 attcgtaaca ttctagttcc aaaaaaggtt gaaatcttca tctggagact ccttaaaaaa
     2341 cgggttccgg tcaaagcgga acttgacaag aggggtatag atcttcactc gttgcgatgc
     2401 ccgctctgtg atgacgattt ggaaactatt gaccactctt tccttcaatg caagcaagtg
     2461 atcgatgtgt gggtgcgggt gcataattgg tggggtgtta actatcaggc ttactcgagt
     2521 atatcggact tattaggatc aagcacgtat tcttcaacga caactttcgg tgggcttctt
     2581 tggcaatcga ttaaatgggt tacaacgtat cacatttgga aatatcggaa caactcgagg
     2641 ttgaacgcga tatcgatagt aaaacctcct tatcgggtga gattccaagg caagacgtcc
     2701 gcaactttcg agacccatga aatggacagg atattaagag aaatcattcg tgctagggac
     2761 aagcctataa cctttgatga attacacgac aaactcgtcg acttcgagat gcaacagaaa
     2821 aagtccactc atgtgactcc tgttgttatt ccaatagtaa attataccca gcgaggccat
     2881 cgtcaatcat ccaatcgtaa tcattactca cgtggaagct attcacaaca caggtacaat
     2941 aattccaatc atgccaactc atctttggaa ccatcttcaa tggattgtcg ctctcttgca
     3001 tggtttctaa aagagaatgc tatcactcct gttgcttacc acactgcggc ctcatcttca
     3061 tcgacccctt cgtggattct tgatatagga tcatcccatc atgtcactgc taatacttcc
     3121 aaccttcaat ccttctcgga ttatggggtc ccagaagaaa taatccttgg tgatggttca
     3181 ggtttaccga tttctcatat tggcaatact actattaaaa cgtcatcata tctatttaaa
     3241 ttaaatgata tactatgtgc accgaactca cgcactaatc ttatttatgt tgctcgtttt
     3301 tgtcgtacta ataatgttta tttgaatttt ttttccgtgg cactacttgg tgaaggatct
     3361 gaacatgggg gcacatttgt ttcaaggagc atgcaaaagt ga
//
LOCUS       XM_071830831             990 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840568), mRNA.
ACCESSION   XM_071830831
VERSION     XM_071830831.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..990
                     /gene="LOC139840568"
                     /note="uncharacterized LOC139840568; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840568"
     CDS             1..990
                     /gene="LOC139840568"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686932.1"
                     /db_xref="GeneID:139840568"
                     /translation="MASTIREAAKEALGVTLGTSTAHKSNRESWWLSDDVQTKVALKQ
                     TRFREAITFGEGTPAERTSVEERYKEAKREAKKALAIAKDKAYEDLYRKLDSKEGAND
                     IYRIAKARERRGKDLVYVKYIKDEVGQSIVREDLIRKRWEEYFASLFSRDRPEQNGEL
                     HDEDREYQNNCFCTRINHEEVRTALRKMGRNKAVGPDQIPIEVWRCLGDDGVRWLTNL
                     FNMTFRSAKMTMEWRLSEVIPIYKNKGDAQICGRSSMEAIHIVRSLMEKYREKQNNLH
                     MAFLDLEKAYDCVPRELIWKTLNGQTLGGAEGATAPGQHNSKGIIVLVQFHIY"
     misc_feature    694..>894
                     /gene="LOC139840568"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggcgtcta ctattagaga ggcggcaaaa gaagctttag gggtgacatt agggacatcg
       61 acagcccaca agagtaatag agaatcgtgg tggcttagtg atgatgtcca aacgaaagtc
      121 gcgttaaagc agacgagatt tagggaggcc attacttttg gagaagggac gcctgcagag
      181 aggactagtg tagaagaaag atataaagaa gctaaaagag aagcaaagaa ggcattagca
      241 attgcaaaag acaaagctta tgaagattta tataggaaac tagactctaa ggagggagcc
      301 aatgacatat atagaatagc taaagctagg gagcgaagag gcaaggactt agtctatgtc
      361 aaatatatca aggatgaagt aggtcaaagt atagtgagag aagaccttat tagaaaaaga
      421 tgggaagagt attttgcatc ccttttcagt agggatagac cagagcagaa cggggaactc
      481 cacgatgagg atcgtgaata tcaaaacaat tgtttctgca cgaggattaa ccatgaggaa
      541 gttagaacgg ccttacgaaa gatggggaga aacaaagcag taggaccaga ccaaatcccg
      601 atcgaggtgt ggaggtgcct aggagacgat ggggttagat ggttgacaaa ccttttcaac
      661 atgacgttta gaagtgcaaa gatgactatg gaatggagac tcagtgaggt tattcccatt
      721 tacaagaaca agggagatgc gcaaatatgt ggacgctcgt cgatggaggc gattcacatc
      781 gttagaagcc ttatggagaa gtatagggaa aaacaaaaca acctacatat ggcgttcttg
      841 gacttggaaa aggcttatga ttgtgtcccg cgcgagctga tttggaagac tcttaatggc
      901 caaactctgg gcggggctga aggtgcaacc gcacctgggc aacataattc aaagggcatc
      961 atagtattag ttcagtttca tatatactag
//
LOCUS       XM_071830832             420 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840569), mRNA.
ACCESSION   XM_071830832
VERSION     XM_071830832.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..420
                     /gene="LOC139840569"
                     /note="uncharacterized LOC139840569; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840569"
     CDS             1..420
                     /gene="LOC139840569"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686933.1"
                     /db_xref="GeneID:139840569"
                     /translation="MIHSNRIVTISTNKEETFTVISAYAPHMGLSDAEKKSFWELLNE
                     VVRGSPADHRLIIGGDLNGHIGAEAEVYEGAHGGFGFGPRNEEGRSILEFAIAHELVI
                     ANSFFKKRDYQLATFHSGGRCTKIDFLLLRKGELRTC"
     misc_feature    <1..399
                     /gene="LOC139840569"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgattcact caaatagaat agtaacaata tctaccaata aggaagagac tttcacggtc
       61 attagcgcat acgcacctca tatgggttta agtgatgctg aaaagaagag tttttgggaa
      121 ttgttaaatg aggtagtgag ggggagccca gcggatcatc gattgattat tgggggtgat
      181 ctgaatggac acattggagc ggaggcagaa gtttacgaag gagcccatgg gggctttggg
      241 tttggtccta gaaacgaaga agggcgctca attcttgagt ttgccattgc ccacgagttg
      301 gttatagcaa actctttctt caagaagagg gattatcagt tagccacttt tcatagcggg
      361 ggtcgctgca ccaagattga ctttttgctc cttcgtaaag gggaacttag gacatgttga
//
LOCUS       XM_071830833             924 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840571), mRNA.
ACCESSION   XM_071830833
VERSION     XM_071830833.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..924
                     /gene="LOC139840571"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840571"
     CDS             1..924
                     /gene="LOC139840571"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686934.1"
                     /db_xref="GeneID:139840571"
                     /translation="MAQLVAQGFTQIPGIDYSATFSPVVKSSTVRIVLSLATLNKWSL
                     HQLDVKNAFLNENLTENVFMEQLPGNDNSFVRKFISRLHSEFAIKDLGALSYFLGLEV
                     TYTSSGLFLSQTKYAHDVLTRAKLLDSKPVATPLATAEVFSSKGTPFSDHTLYRSLVG
                     ALQYLTITRPDISYAVNQVSQFLQAPTFDHFQAVKRILRYVKGTIAYGLSFHHSPMPS
                     ILGYSDADWARCLDTRCSTYGYSIFLGGNLVSWSAKKQSTIARSSCESKYQALANTAA
                     DVVWLLTFSVNCMCFLLIGLLFCVTTRVLSS"
     misc_feature    4..408
                     /gene="LOC139840571"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    661..>843
                     /gene="LOC139840571"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggcacaac tcgttgcaca aggatttaca caaatccctg gtattgacta ctcagctact
       61 tttagtcctg tggtcaaatc atctacggtt cgtatagtgc tatctcttgc cactcttaac
      121 aagtggtcac ttcatcaact cgatgtgaag aatgcttttt tgaatgaaaa tcttactgag
      181 aatgtcttta tggagcagct accaggaaat gataattcct ttgttcgaaa attcatctca
      241 cgtttacatt cggagtttgc gattaaagat cttggtgctc ttagttactt tctcggactt
      301 gaagtcactt atacatcttc tggtcttttt ctcagtcaga caaaatatgc tcatgatgtt
      361 ctcacacgtg ctaagttgct tgattcaaaa cccgtggcta ctccattggc cactgctgaa
      421 gttttttctt cgaagggtac tcctttttcg gatcatacac tttatcgctc tcttgttggt
      481 gccttacaat acctaacaat aacgcgccct gatatttcat atgccgtaaa tcaggttagc
      541 cagtttcttc aagctcccac atttgatcat ttccaagcag tcaaacgcat acttcgttat
      601 gttaaaggta ctattgcgta tggtttatca tttcatcatt ccccaatgcc ttcaattctt
      661 ggttattctg atgcagattg ggctcgttgt cttgatacac gatgctccac ttatggctac
      721 tcaatatttc ttggaggaaa tcttgtctct tggagcgcga agaaacaatc gaccattgct
      781 cggtcaagct gtgaatcaaa atatcaggct cttgctaaca cggctgctga cgttgtatgg
      841 ttactcacct tctccgtgaa ttgcatgtgc ttcctcctga tcggcctact attttgtgtg
      901 acaacaagag tgctctcttc ttaa
//
LOCUS       XM_071830835             723 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840573), mRNA.
ACCESSION   XM_071830835
VERSION     XM_071830835.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..723
                     /gene="LOC139840573"
                     /note="uncharacterized LOC139840573; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840573"
     CDS             1..723
                     /gene="LOC139840573"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686936.1"
                     /db_xref="GeneID:139840573"
                     /translation="MLEVSRVDILVLLGICTKGRSLAFEGPVGNTEVFPIEVGLHQGS
                     ALNPFLFSLILDELSRGIQECIPWCLIFADDIVLVSESKEELNRRLEQWRVALEDQIL
                     HPQNSFRYLGSMLHKSGRIDEDVSHRIEVWWVKWRAVIGVLFDRKIPLKLEGKFYKVA
                     FRPAMLYGSEENLEVRNIIDKLREEWLRWFGHVRRRPLTAPVRRVEALTVDGVRRRGR
                     PTRKWEDRIKLDLKQGMKDASY"
     misc_feature    <88..336
                     /gene="LOC139840573"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    127..129
                     /gene="LOC139840573"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgctagaag tatcccgagt agatatattg gtgttattag ggatatgtac aaaggggcga
       61 agtcttgcgt tcgaagggcc ggtgggaaat accgaagttt tcccaataga agtaggcctg
      121 catcagggat cggcccttaa cccttttctc ttctctttga tccttgacga gctttctcgg
      181 gggatacaag agtgtatccc ttggtgcttg atttttgccg acgatattgt gcttgtttcc
      241 gaatctaagg aggagcttaa tagaagactg gagcaatgga gggtagcctt agaagaccag
      301 atcttacatc cacaaaactc gtttagatac ctaggctcga tgctccacaa atcagggagg
      361 atagatgaag acgtgtcaca ccgtattgaa gtatggtggg tgaagtggag agcagtgatt
      421 ggagtcttat tcgataggaa gatcccccta aagttggaag ggaaattcta caaggtggca
      481 tttagacctg ccatgctata cggatcagag gagaacctgg aagttagaaa catcattgac
      541 aagctaagag aagaatggct tcgatggttt gggcatgtga ggaggcgacc tcttactgca
      601 cctgttcgga gagtcgaggc acttacagtt gacggtgtaa ggagaagggg tagacctaca
      661 cgtaagtggg aggatagaat aaagctcgac ttgaagcaag gcatgaaaga tgctagctac
      721 tag
//
LOCUS       XM_071830836            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840574), mRNA.
ACCESSION   XM_071830836
VERSION     XM_071830836.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139840574"
                     /note="uncharacterized LOC139840574; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840574"
     CDS             1..1116
                     /gene="LOC139840574"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686937.1"
                     /db_xref="GeneID:139840574"
                     /translation="MVTLGHVLRAQGRVGLYDLEAEIVDILCVQETRWKGRGAVKIKD
                     YTLWFSRLRVARNGVGIIIGPLYNVNVMDVSRRSDMIMSVRLVILEVTYTVISAYAPH
                     VGLGGAEKRHFRKSLDEVMRMCPPNHRLLIGGDLNVHIGSDVEGYPGAHGGFGYGVRN
                     EEGLSILDFSIAHDLVVTKSFFRKTNARLATFHSGGHSTQIDYLLLHKGDLRTCRDCK
                     VLTDLTCSSQHRLLVMDLVLRRRVTKSVRPDQPKILWKKLNGEKAETFKTLVVERVDA
                     EVEMVSHDDEDQMWNCLALVISAKKDKYYDQSNPTDDPLTPVSSELSLIYETKKKDKL
                     DGTTTTKMGTDYSCSSDVQLWDGVKGAGGFDVLIDGS"
     misc_feature    46..708
                     /gene="LOC139840574"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(91..93,295..297,403..405,409..411,604..606,682..687)
                     /gene="LOC139840574"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(91..93,682..684)
                     /gene="LOC139840574"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(295..297,409..411,685..687)
                     /gene="LOC139840574"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atggttactt taggtcacgt ccttcgagct caggggcggg taggtttata tgatctagaa
       61 gcggaaatag tggacatttt gtgtgtccaa gagactagat ggaagggtcg aggggcggtc
      121 aagatcaagg actacacgtt gtggttctcg agattgagag ttgctagaaa cggtgttgga
      181 attattattg gcccactcta taacgtgaat gtaatggatg tgagtagacg gagcgatatg
      241 attatgtcgg ttaggttagt gatcctggag gtgacctaca cggtcattag cgcttacgca
      301 cctcatgtgg gccttggtgg agctgaaaag agacacttta ggaaatcgtt agatgaggtt
      361 atgaggatgt gccctccgaa ccatcgatta cttattggtg gagatctaaa tgttcatata
      421 ggatcggatg tcgagggcta tccgggtgcc catgggggat ttgggtacgg agtaagaaat
      481 gaggaagggc tctctattct cgatttttcc attgcccacg atttggttgt tacgaaatcg
      541 tttttcagga aaacaaatgc tcggttagca actttccata gcgggggtca tagtacccag
      601 attgactatt tgctacttca caaaggggat cttaggacat gtagggactg taaggtactg
      661 actgacttga catgctcctc ccaacacaga ttgttggtca tggatttggt tctccggaga
      721 cgggtcacca agagtgtaag gcccgaccaa cctaaaattc tatggaagaa gttgaacgga
      781 gagaaggcag agacttttaa aactttggtt gtggaaagag ttgatgcaga agtggaaatg
      841 gtatctcatg atgatgagga ccagatgtgg aattgtctgg ctctcgtgat atcggctaaa
      901 aaagacaaat attacgatca atcaaatcct actgatgacc cattgacccc agtttcttct
      961 gaactaagtt tgatctacga gaccaaaaag aaagataaat tggatggaac aacgacaacc
     1021 aaaatgggta ccgactacag ctgctccagt gatgtccaat tgtgggatgg ggtcaagggt
     1081 gcaggtggct tcgatgtgtt gatagatggc tcatga
//
LOCUS       XM_071830837             564 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-hook motif
            nuclear-localized protein 16-like (LOC139840575), mRNA.
ACCESSION   XM_071830837
VERSION     XM_071830837.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..564
                     /gene="LOC139840575"
                     /note="AT-hook motif nuclear-localized protein 16-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 49 Proteins"
                     /db_xref="GeneID:139840575"
     CDS             1..564
                     /gene="LOC139840575"
                     /codon_start=1
                     /product="AT-hook motif nuclear-localized protein 16-like"
                     /protein_id="XP_071686938.1"
                     /db_xref="GeneID:139840575"
                     /translation="MANGEMDHAVADEHVTRRSRGRPAGSKNKPKPPIIITRESANTL
                     RAHAMEVSPGCDVIESLANFARKKQCGISVLSATGCVTNVALRQSSPTSGSGPIVTLY
                     GQFEILSLIGSVLPPPAPPGVTGLDIYLAGPQGQLVGGVISGPLIAYGSVVIMAATFK
                     NATFDRLPNEKQELVAITTVAQPLSKT"
     misc_feature    133..477
                     /gene="LOC139840575"
                     /note="Domain of unknown function found in archaea,
                     bacteria, and plants; Region: DUF296; cd11378"
                     /db_xref="CDD:211390"
     misc_feature    order(136..138,142..144,148..150,157..159,232..237,
                     295..297,316..327,331..333,337..339,373..375,379..381,
                     385..387,394..396,403..405,409..417,457..459,463..465,
                     469..471,475..477)
                     /gene="LOC139840575"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:211390"
ORIGIN      
        1 atggctaatg gtgaaatgga tcatgcggtt gcagacgaac atgttacaag aaggtcacga
       61 ggcagacccg ctggctctaa aaataaaccc aagccaccca tcatcatcac cagagaaagt
      121 gccaacacac ttcgggctca cgccatggag gttagcccag ggtgcgatgt aatagagagc
      181 ttagctaatt tcgctagaaa aaaacaatgt ggcatatctg ttttaagtgc aacaggatgc
      241 gtgactaacg ttgcactacg ccaatcgtca ccaacttccg gaagcgggcc catcgttacg
      301 ctatatggtc agtttgagat tttgtcattg atcggttcgg tactaccacc accggcaccg
      361 ccaggtgtca ccgggttaga tatttatcta gctggacccc agggtcagct agtaggtgga
      421 gtcatttcag gccctcttat agcttacgga tccgttgtca tcatggctgc aacctttaag
      481 aatgcaacat tcgataggct gccgaatgaa aaacaagaac ttgtagcaat taccacagtt
      541 gcccaaccgc tttcaaagac ttag
//
LOCUS       XM_071830838             927 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840578), mRNA.
ACCESSION   XM_071830838
VERSION     XM_071830838.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..927
                     /gene="LOC139840578"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139840578"
     CDS             1..927
                     /gene="LOC139840578"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071686939.1"
                     /db_xref="GeneID:139840578"
                     /translation="MGRHKRNVTYNNVFIVLLVYVDDIVITGNNIEEINNVKHSLSKT
                     FMIKDLGKLKYFLGIEVIETEHGLSLCQRKYFLELLNEFGLLGCKPLNTSIEVNVSSY
                     NGNEKDKVLSNITVQFMHAPITAHLKLAFRVLRYLKGSPGKGVHISKGMSLNLVAYSD
                     SDWAKNLIGRKSITGYCVFMGNSLISWKSKKQPTVSMSSAEAEYRALAAITCEIIWIL
                     KVLNDLKLMSVLPITLCCDNSPVIQIAANPVHHERTKHFDIDWHIVREKVNSGLIKIL
                     KIDSEVNPADLFTKDKSMIWIKGENSWIEVKE"
     misc_feature    <43..288
                     /gene="LOC139840578"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    466..870
                     /gene="LOC139840578"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(478..489,592..600,607..609,709..711,787..789,
                     868..870)
                     /gene="LOC139840578"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggggcgtc acaaacggaa tgttacatat aataatgtgt ttattgttct tttagtatat
       61 gttgatgaca ttgtaataac gggaaataac attgaagaaa tcaataatgt taaacattct
      121 ttaagcaaaa catttatgat taaagactta gggaaactta aatactttct tggtattgaa
      181 gttattgaaa ctgagcatgg tttgagttta tgtcaaagaa aatatttcct tgagttgcta
      241 aatgagtttg gtctgctagg ttgtaaacct ttaaatactt caattgaagt caatgtttct
      301 tcatataatg gaaatgaaaa ggataaagtt ttatcaaata tcactgtcca atttatgcat
      361 gcaccaataa ctgctcattt aaagttggcc ttcagagtac ttaggtacct caaaggtagt
      421 ccaggtaaag gtgttcacat ttcaaaaggt atgtctctaa accttgttgc atattcagat
      481 tctgactggg caaagaactt gataggaaga aagtctataa ctggttactg tgtgtttatg
      541 ggtaactctt taatttcatg gaaaagtaaa aaacaaccta ctgtgtctat gtcttctgct
      601 gaagcagaat acagagcact agcagctatt acttgtgaaa tcatttggat tttaaaggtg
      661 ttaaatgact tgaaactgat gagtgtgtta cctataactt tgtgttgcga taattcacct
      721 gtaattcaaa ttgctgcaaa tcctgttcat catgaaagga caaaacattt tgacattgat
      781 tggcacattg ttagagaaaa ggttaatagt ggtttaataa aaattttgaa aattgactct
      841 gaagtgaatc ctgcagattt gttcacaaaa gataagtcaa tgatttggat caaaggagag
      901 aatagctgga tagaagttaa ggaatga
//
LOCUS       XM_071830839            3066 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840579), mRNA.
ACCESSION   XM_071830839
VERSION     XM_071830839.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3066
                     /gene="LOC139840579"
                     /note="uncharacterized LOC139840579; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139840579"
     CDS             1..3066
                     /gene="LOC139840579"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686940.1"
                     /db_xref="GeneID:139840579"
                     /translation="MAISNFNDFINSSNMIDQIICNEEFTWKGPDGKMSRIDRVLVNG
                     PWMQLFPDSILLAGAPKLSDHRPIIWVSFEGWAAFILQKKFRSLKALLRDWKANEVVI
                     SKKDLLDCENEIRRIKCIYQSRDLNDFERVILFDCKKRKKQILTHEESKKRLHSRVKW
                     LKLGDKNTKFFHLVSRIKQQSSFIAGMSIDNIWVEDPSIVKDRALQFFKQMFSVTANN
                     RPTILNWDTINLSKISAQQARTVEAQFDADEIFNVINEFDGNKTPGPDGFSLSFFKKA
                     WYFLEDEVVQMFSQFFSNPSFPKGFNSSFIVLIPKSNLSKKIEQMRPISLINAPYKII
                     AKVLANRLKFVVSCIVSENQHGFVPSRALLDGVMFVSEVANLAKKTKCPLLMIKLDFS
                     KAYDSISHEFLLEVLSPMGFVNRFISWIKCCISGINFSVLLNGSPSKEVAVVLSKLLS
                     NDLSTGALQGFNIANNNKVNHSQFADDTILFAHPSLQELNRLKEILALFSQVSGLKIN
                     HSKTMIYGIHVSRSDLRHFANTFGCEIGDFPLEYLGVPIGFNSGRIAMWDPVIKKFKR
                     KLAGWKGRCLSFGGRLVMVKAVLSSLPLHFMAIYKAPSSVIIQLERFRRNFLWGGDCL
                     KSKPSLVKWQSVCLPVDMGGLGITPLRSKNFALLAKWWSKMNSNKKHVWQALVCTSFG
                     SSFSGKLMHNVSMISTSKTSSIWKDLLKLHHEDSMAHVIGDNTWSWKLGDGLQISFWN
                     DHWVGHFSLRVRFPNLFRICSFQNGNVRQFRWPFNVDTVQFSWNLNLYGPLIEFDSIY
                     EAELKGLLSSFKLNDSVEDSVIWNPSTSGEFSVAEAIRIMVVSDNSQGTNWRKLIWNN
                     RVPSKVSIFHWLACKKSIPVRDVLIRRHILPQNHSTLCVWCETEIETIEHLLLHCPWT
                     FKVWSALFQWWNIRWIIPGSILSFSADWYNGMGIGDKNFWRLIGPATIWAIWLTRNDF
                     IFNGNYTCWASIVRQIKLKVFLWATSFKLCYAHQSYVWDINPGLLCHSS"
     misc_feature    <25..207
                     /gene="LOC139840579"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    910..1641
                     /gene="LOC139840579"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1168..1185,1228..1233,1420..1422,1426..1431,
                     1627..1632)
                     /gene="LOC139840579"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1168..1185,1228..1230,1426..1428)
                     /gene="LOC139840579"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1231..1233
                     /gene="LOC139840579"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    2485..2751
                     /gene="LOC139840579"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggccattt caaatttcaa cgacttcatt aactcctcta atatgattga tcaaattatt
       61 tgtaatgagg agtttacttg gaaaggtccg gatggtaaga tgtcacgtat tgatagagtt
      121 ttggttaatg ggccatggat gcaacttttt ccggactcca ttttgttagc tggggctcct
      181 aagttatcag atcataggcc tatcatttgg gtgtcttttg aagggtgggc ggcttttatt
      241 ttacaaaaga aatttcgtag tcttaaagcc cttttaaggg actggaaggc taatgaggtc
      301 gttatctcaa agaaagattt gttagattgt gagaacgaga taagaagaat caaatgtatt
      361 tatcaatcac gcgaccttaa tgatttcgaa cgagttattt tatttgattg caaaaaacgc
      421 aaaaaacaaa ttttaactca tgaagaatcg aaaaaacgtc ttcactctcg agttaaatgg
      481 ttaaaactcg gggacaaaaa cacaaagttc tttcatctcg tgtcccgtat taaacaacaa
      541 tcatccttca ttgccggaat gtcaattgat aatatttggg tggaagatcc ttccattgtt
      601 aaggatcgtg ctttgcaatt cttcaaacaa atgttctctg ttacagccaa taacaggccc
      661 actattttaa actgggacac aatcaatctg agcaaaattt cagcccagca ggcccgtaca
      721 gtggaggccc aatttgatgc tgatgaaatc ttcaatgtta ttaatgagtt cgatggtaat
      781 aaaacccccg gtccagacgg gttttcatta tcctttttta aaaaggcttg gtatttctta
      841 gaggacgaag ttgtgcaaat gttttctcaa tttttttcga atccgtcatt tccaaaaggt
      901 ttcaattctt ctttcatagt tttaataccc aaatccaact tgtccaagaa gattgagcaa
      961 atgcgtccta ttagccttat taatgcaccg tataagatca ttgcaaaggt cttagcgaat
     1021 cgtttgaagt ttgtggtttc atgtattgtg agtgaaaatc aacatgggtt tgttccgtca
     1081 agggccttat tagatggggt tatgtttgtt agtgaggtag ccaatctagc taagaaaaca
     1141 aagtgtccac tgttaatgat caaattagat ttttctaagg catatgatag catctctcac
     1201 gagtttttat tagaagttct atctccgatg ggttttgtta atcggttcat ttcttggatc
     1261 aaatgttgta tttctggaat taatttctcg gtacttttaa acggttctcc atcaaaagaa
     1321 gtggcggtag tattaagtaa attactttct aacgatttaa gtaccggtgc tcttcaaggt
     1381 tttaacatcg caaataataa taaggtaaac cactcacaat ttgcggacga tacaattctt
     1441 ttcgcacatc cttcattaca agaattgaat cgcctgaaag agattcttgc tttattttct
     1501 caagtctcgg gtcttaaaat aaatcattca aagactatga tttatggtat tcacgtttca
     1561 agatccgact tgagacactt tgccaacact ttcgggtgtg aaataggcga tttcccgtta
     1621 gaatatttgg gtgttcctat tgggtttaat agtggtcgaa tagctatgtg ggatccggtt
     1681 attaaaaaat tcaaacgcaa gttagccggg tggaaaggta gatgtctttc ttttggagga
     1741 cgtcttgtta tggttaaagc ggtactctca agtttacccc ttcatttcat ggctatatat
     1801 aaagctccct cttcggtcat tattcaactt gaaagatttc ggaggaattt cctttggggt
     1861 ggtgattgct taaaatcgaa accatctctc gttaaatggc aatcggtttg cttgccggtt
     1921 gatatgggtg gtttgggtat cacacccctt cgttccaaga actttgctct tttagcaaaa
     1981 tggtggtcaa aaatgaactc caacaaaaaa catgtttggc aagctttagt ttgcacctct
     2041 tttggtagtt cattctctgg taaattaatg cataatgttt ccatgatttc aacctctaaa
     2101 acctcctcca tttggaaaga tttgttaaag ttacaccatg aagatagtat ggctcatgtt
     2161 attggagaca atacgtggag ttggaaatta ggagacggat tacaaatttc cttttggaac
     2221 gatcattggg tcgggcattt ttctctacgg gtacgttttc ctaatctttt tagaatttgc
     2281 tcatttcaaa atggaaacgt gagacagttt agatggccct ttaatgtaga cactgtccaa
     2341 ttttcatgga accttaatct ttatggtcca ttaatcgaat tcgatagcat ttatgaggca
     2401 gaattaaagg gtctgttatc ttcattcaag ttgaatgatt ctgttgagga ctccgtgatt
     2461 tggaatccgt cgacttccgg agaatttagt gtggccgagg caattagaat catggtggtt
     2521 tccgataact cacaaggtac aaattggagg aaattaattt ggaataatcg agtcccttca
     2581 aaagtttcaa ttttccattg gctagcttgt aaaaaaagta ttccggttag agatgttctc
     2641 attcgaaggc atatacttcc acaaaatcac tcaactcttt gtgtttggtg cgaaaccgag
     2701 atagaaacaa ttgaacatct tcttcttcat tgcccgtgga cgttcaaagt ttggtccgcc
     2761 ctttttcagt ggtggaatat tagatggatt attccgggtt ccattttgag tttttcggcc
     2821 gattggtata atggtatggg tattggtgat aaaaattttt ggagattaat aggtccggcg
     2881 actatttggg caatatggtt gacaagaaat gactttattt ttaacgggaa ctacacttgt
     2941 tgggcttcca tcgttcgtca aatcaagctc aaagtctttt tgtgggctac ttcgttcaag
     3001 ttgtgttatg ctcatcaatc ttatgtatgg gatatcaatc ccgggctttt gtgtcattca
     3061 agttga
//
LOCUS       XM_071830840            1332 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UPF0481 protein
            At3g47200-like (LOC139840580), mRNA.
ACCESSION   XM_071830840
VERSION     XM_071830840.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1332
                     /gene="LOC139840580"
                     /note="UPF0481 protein At3g47200-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139840580"
     CDS             1..1332
                     /gene="LOC139840580"
                     /codon_start=1
                     /product="UPF0481 protein At3g47200-like"
                     /protein_id="XP_071686941.1"
                     /db_xref="GeneID:139840580"
                     /translation="MRENEWVMNVNQELKNMGDSSSEMEQWKKRSIYRVPSCVTDLNK
                     KAYKPQSVSFGPYHYGESNLESMEENKHRALLHFLKRYKKPFECYVDAVMEIVEDLKH
                     AYTSLEQKWHLDTIGFTKMMILDGCFMLEILRVATSQDGDIDNPDDEVIDDYAPNDPV
                     FSKHGKLYIMPYVKRDMLMLENQLPMLLLNTLVVDSKDGDPNQHDEELVNRMMQRFFF
                     PYTRITKMGRCLHPLDVYRRGLLWENPHHKKKIVAKSYHRLVIEEGDEIVRSATELYE
                     AGIRFKKSKTRSLKGIGFESGVLKLPPILVDDATESLYLNLIAFERLHVGAGNEVTSY
                     IFFMDNIIDNAKDVSLLHSQGIIQNAIGSDKAVAKLFNSLSKDITLDPDSALDVVHKQ
                     VHNYCSKPWNEWRANLIHTYFRSPWAILSVLAAVLLFALTIVQTIYTVFPK"
     misc_feature    94..1293
                     /gene="LOC139840580"
                     /note="Plant protein of unknown function; Region: DUF247;
                     pfam03140"
                     /db_xref="CDD:460823"
ORIGIN      
        1 atgagagaaa atgagtgggt gatgaatgtg aatcaagaac taaaaaacat gggcgattcg
       61 tcatctgaaa tggagcaatg gaagaaacga tcaatttatc gcgtaccctc ttgtgtaacc
      121 gatctcaaca aaaaagcata caagccacaa tcagtctcat tcggtccata ccattatggc
      181 gaatcgaatt tagaatccat ggaagaaaat aaacaccgag cgctccttca ttttctcaaa
      241 agatacaaaa agcctttcga atgctatgtc gatgctgtaa tggagatagt tgaggatctt
      301 aaacacgcat acacttcact agagcaaaag tggcatctag acacgattgg tttcacgaaa
      361 atgatgattt tggatggttg ttttatgctt gaaatattgc gtgtagcgac tagtcaagat
      421 ggagatattg ataatcccga tgatgaggtt attgatgatt atgcaccgaa tgatccagtt
      481 tttagcaaac atggaaagct ttatatcatg ccttacgtca aacgcgatat gctcatgctt
      541 gaaaaccagt tgccaatgct gcttttgaat acactcgtcg ttgattcaaa agacggagac
      601 cctaaccagc acgatgaaga attagtaaac cgaatgatgc aaagattctt cttcccgtac
      661 actcggatca caaaaatggg acgatgcttg cacccattgg atgtgtatcg aaggggtctg
      721 ctatgggaga atccacacca caagaagaaa attgttgcaa aatcatacca ccgattagtc
      781 attgaagaag gtgacgagat agtcagatca gccaccgaac tatacgaagc aggaatcaga
      841 ttcaagaaaa gcaaaacaag aagcttaaaa ggtataggtt ttgaaagcgg ggtcctcaag
      901 cttcctccga tcttggtgga tgatgcaact gagtcgttat atttgaacct gatagcgttt
      961 gaaagactcc acgttggtgc aggcaacgag gtgacgtcat acatattctt catggataat
     1021 attatcgata acgcaaaaga tgttagcctt ctgcattcgc aaggtataat ccaaaatgct
     1081 atcgggagcg ataaggctgt ggccaaattg tttaattcgc tatcgaaaga tatcacgttg
     1141 gatccagata gcgcactaga cgttgtgcat aaacaggttc ataattactg cagtaaacca
     1201 tggaacgaat ggcgcgcaaa tctcatacac acatatttta ggagcccatg ggcgatctta
     1261 tcggttcttg cagcagtttt gttatttgca ctcactattg ttcaaactat ctacactgtt
     1321 ttccctaagt ag
//
LOCUS       XM_071830841            1086 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides acyltransferase-like
            (LOC139840581), mRNA.
ACCESSION   XM_071830841
VERSION     XM_071830841.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 59% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1086
                     /gene="LOC139840581"
                     /note="acyltransferase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840581"
     CDS             1..1086
                     /gene="LOC139840581"
                     /codon_start=1
                     /product="acyltransferase-like"
                     /protein_id="XP_071686942.1"
                     /db_xref="GeneID:139840581"
                     /translation="MTTTIKNLRKIATIKKFHTIVSRETIKPSSPTPSNLQIFNLSLL
                     DQCAHHAYIPAIFFYPNFKKSLSQTLNQYHPFAGKFPTPRPTYVNCNDNGVTFLEAFN
                     DSKMDDIFQFNNCACGGTTVAISISHKIVDGCTLCTFMNHWATVARNTAGLYNIQHKS
                     FVFSNSKLRDMKNKVRAMYEKAGTPLNNPSRVEVLTSLIYKIGMKAEAERSGTFSGPS
                     YLFTVVDMRTKMLEKFPETTVGNILSNFFTVIRTDPNETELHTIVAEMRKRKMELQLV
                     KNLQQAFETSRALELSVETEGLDYVAIKSYCASSLYRFRFKEVDFGWGKPIRLSIPMG
                     TIDGNSLVLIESLDGDGIEAQETQIRT"
     misc_feature    58..1062
                     /gene="LOC139840581"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     Region: PLN02481; cl23789"
                     /db_xref="CDD:355048"
ORIGIN      
        1 atgacgacga cgatcaaaaa tctccgaaaa atagctacaa tcaagaaatt tcacaccatc
       61 gtatctcgag aaaccatcaa accttcgtct ccgacccctt cgaacctcca aatcttcaac
      121 cttagtttgc ttgatcaatg tgctcatcat gcatacattc ccgccatatt cttttacccg
      181 aatttcaaaa aatcattatc acaaacacta aaccaatatc atccctttgc aggcaagttt
      241 cccacaccaa gaccaactta cgtcaactgc aacgataacg gagtcacgtt tcttgaagca
      301 tttaatgata gcaaaatgga cgacatcttt cagtttaata attgtgcatg tggtggaacc
      361 acagtagcta tttctatatc tcacaagatt gttgatggct gcaccctttg cacatttatg
      421 aaccattggg ctactgtggc acgtaacacc gcaggcttat ataatattca acataaaagt
      481 tttgtgtttt cgaactcaaa gctacgtgac atgaaaaaca aggttagagc catgtatgaa
      541 aaagcaggga cacctttgaa caacccttcg cgtgtcgagg tattaacatc tttgatttac
      601 aaaataggaa tgaaagcaga agcagaacgt tccggaacat tttcaggtcc atcttactta
      661 tttacagttg tggacatgcg aacgaaaatg ttggaaaagt ttccggaaac aactgtaggg
      721 aatatcttgt cgaatttttt tacagtcatc agaacggatc caaatgaaac agaattacat
      781 acaattgttg ctgaaatgag aaaaagaaag atggaacttc aactagttaa gaatttacaa
      841 caagcttttg aaacttcaag agcattggag ttaagtgtgg aaaccgaagg tctagattat
      901 gttgcaataa aatcatattg tgcgtcgagt ttatacaggt ttcggttcaa ggaagtggat
      961 ttcgggtggg gaaaacccat tcgtttaagt attcctatgg gaacgatcga tgggaatagt
     1021 ttggttttga ttgaaagtct tgatggagat ggcattgaag cacaagaaac acaaattcgg
     1081 acatga
//
LOCUS       XM_071830842             801 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840582), mRNA.
ACCESSION   XM_071830842
VERSION     XM_071830842.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..801
                     /gene="LOC139840582"
                     /note="uncharacterized LOC139840582; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840582"
     CDS             1..801
                     /gene="LOC139840582"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686943.1"
                     /db_xref="GeneID:139840582"
                     /translation="MVGKSGGQLLIWDTNIYEAKSVIRGDYVIGISGKWLDSDSTCNI
                     VNVYGPHEDVGKQKFWEELSNLMESDVNNAWVLCGDFNEVRNEAEQFNSDYVEYRAKR
                     FNEFIMDNCLIEIAMSGRIFTRVSGDGLKFSKLDRFLVTEKFLHPWKDLTASIMDRHL
                     SDHCAIILKDEERNFGPKPFKVFDAWLDDEEVNKIIQEAWEKEIMIIDRKDCVFRNRL
                     KNVKNAIKEWSSIKLDILEVEIESHISEAKILELKAEVTTLNEIELEK"
     misc_feature    <52..507
                     /gene="LOC139840582"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(142..144,244..246,487..489)
                     /gene="LOC139840582"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atggtgggta aatcgggtgg gcaactctta atatgggaca ccaatattta tgaggccaag
       61 tcagttataa gaggggacta tgtgatcggg atttctggga aatggttaga ttcggactcg
      121 acgtgtaata ttgtaaatgt gtatggacca catgaggatg tcgggaaaca aaaattttgg
      181 gaagagctat cgaatctaat ggaatcggat gtaaataatg cgtgggtatt gtgtggggat
      241 tttaatgagg ttaggaatga ggccgaacaa tttaatagtg actacgtaga atatagggca
      301 aaaagattca atgagttcat tatggataat tgtttgatag aaatagctat gtcggggcgt
      361 attttcactc gggttagcgg agatgggtta aaatttagca agctagatag gtttctcgtt
      421 acggaaaaat ttcttcatcc atggaaagat ttgacggcga gtataatgga tagacactta
      481 tcggaccatt gtgctattat tttaaaagat gaagaaagga actttgggcc gaaaccgttt
      541 aaagtttttg atgcttggct agatgatgaa gaggtgaata agattataca agaggcatgg
      601 gaaaaggaga taatgataat agatagaaaa gattgtgtgt ttaggaatag gctaaaaaat
      661 gttaaaaatg cgattaagga atggagtagt attaagcttg acattttaga agtagaaata
      721 gaatcccaca tatcagaggc aaagattctg gaattgaaag cagaggtaac aacattaaat
      781 gaaatagaat tagaaaagta g
//
LOCUS       XM_071830843            1092 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides wall-associated receptor
            kinase 2-like (LOC139840583), mRNA.
ACCESSION   XM_071830843
VERSION     XM_071830843.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1092
                     /gene="LOC139840583"
                     /note="wall-associated receptor kinase 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840583"
     CDS             1..1002
                     /gene="LOC139840583"
                     /codon_start=1
                     /product="wall-associated receptor kinase 2-like"
                     /protein_id="XP_071686944.1"
                     /db_xref="GeneID:139840583"
                     /translation="MNFQILLATITTTAVLWAASAQNGPNCETSCGNVTITYPFGSGE
                     GCYYSPDFLVTCNRSSGVPIPYFGLSTGNVVISNISINQSEIEIMMFVARDCYNTSGR
                     ESRSRPSLALRDFRISTKNKFVAIGCDTQALFSVTRDSRANVTDGSGCNSICGRNSLM
                     TNESCSGVGCCEAEVPEGMKSFQILLNSFNNHTNITDFNPCSYGFFVEEGKFSFYTNY
                     LRDFRSVEKMPMVLDWAIGKLTCDEASRNSDNFLCKGNSECDQDYKGPGYRCICREGY
                     EGNPYLPNECKNIDECKRGKHDCEHECEDTEGSYTCSCRKGYSGDGRKDGTGCTKDE"
     misc_feature    79..264
                     /gene="LOC139840583"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; Region: GUB_WAK_bind; pfam13947"
                     /db_xref="CDD:464052"
     misc_feature    <856..954
                     /gene="LOC139840583"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; Region: vWFA;
                     cl00057"
                     /db_xref="CDD:469594"
ORIGIN      
        1 atgaattttc aaatacttct agcaacaatc acaacaactg cagttttgtg ggcagcaagt
       61 gctcaaaatg gaccaaattg tgaaacttca tgtggcaatg taacaattac atacccattt
      121 ggttcaggtg aaggatgtta ctatagtccc gattttcttg taacttgtaa ccgatcatcc
      181 ggtgtaccaa ttccttactt tggattaagc acaggtaacg ttgttatttc aaatatatcg
      241 ataaatcaga gtgaaatcga aattatgatg tttgtagccc gtgattgcta caatacttct
      301 ggtcgagaaa gtagatcccg tccctcttta gccttacggg attttcgaat ctcgaccaag
      361 aataagtttg tagctattgg ttgtgacaca caggcgttat ttagtgtaac gagagactcg
      421 agagccaatg tgactgatgg tagtggatgt aattctatat gcggtagaaa tagtcttatg
      481 acaaatgaat cttgttcggg agttgggtgt tgcgaagcag aagtaccgga aggaatgaaa
      541 tcttttcaaa tattactaaa tagttttaat aaccacacga atataacgga ttttaatcct
      601 tgtagctatg gtttttttgt tgaagaaggg aagtttagct tctatacgaa ttatttgcgc
      661 gatttcagaa gtgttgaaaa gatgcctatg gtacttgatt gggcaattgg taaattgact
      721 tgtgatgaag caagtaggaa cagtgataat ttcttatgta aaggaaatag cgaatgtgat
      781 caagattaca aaggtcctgg ttatcggtgc atttgccgtg agggttacga aggcaatcct
      841 taccttccaa atgagtgcaa gaatattgat gagtgcaaac gtggtaaaca tgactgtgaa
      901 catgaatgtg aagatacaga aggtagttat acttgttctt gtcgaaaagg ttactctgga
      961 gatggtagaa aagatggaac aggatgcaca aaagatgaat gagttcttat aaaatttgtt
     1021 atgggtatgt aaagtttatg aaatgtgtag tactttattc aaaacagtga gttatgatta
     1081 attagggccg tt
//
LOCUS       XM_071830844            2139 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840585), mRNA.
ACCESSION   XM_071830844
VERSION     XM_071830844.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2139
                     /gene="LOC139840585"
                     /note="uncharacterized LOC139840585; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840585"
     CDS             1..2139
                     /gene="LOC139840585"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686945.1"
                     /db_xref="GeneID:139840585"
                     /translation="MEEAAHSSIASLIKEEFDKRMPQLLNEAGNLRAEGRQTVNHEIV
                     TSRPYGLKDFKLSNPPTYERDLNPIKSTRWISDIEGCFRTTRCPEDLKTTFGVCMLRG
                     VAQRWWDDLLAIQGNDYAERLTWGEFKREFFKNFRSEAEVGRLKSELQNTHQGSMDLN
                     TFRVHFIDRLQFNSEYINDEMGKCRLFHGLLREEIRERLIISQFRSFPDLFDAARDVE
                     NELVKKGAITYKKENFNSKRKFEQSGSPNKKTKGNEGRKGGGCNLGQLCFTCGKLGHI
                     LRDCKSTIPKATICFNCHDEGHRKAYCPKLSEFERKEEQRKEVIRRLEKSAGTPKSRS
                     FQMTVDEALRSSEVVAGPCLIIRVKTPSREEVIIQGEGQRRPASICTYARARRLVSSG
                     CAAFLAHVVDSRKESKFIEDLPVVRDYKDVFPDDLPGVPPERQVEFRIELIPGAAPIV
                     KTPYRLAPTEMQELMSQLQELLDKGFIRLSNSPWGAPLTRKNVKFDWGNDQEVAFQLL
                     KHKLSHAPVLVLPEGTEDMTVYCDASINGLGCVLMQKGRVIAYASRQLKEQEKNYPIH
                     DLELAAVVHALKFWRHYLYGIKCTIYTDHESLKYLFNQRYLNNRQRRWLDLLKDYDCE
                     ILYHSGKANVLADALSRKNQYPGIRVESLRMVITNEFLKKLGEIQVETFVHNKHEERI
                     KGQTESIKLGPHGLLSFNGIVWVPKIGEYR"
     misc_feature    289..>471
                     /gene="LOC139840585"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    622..>915
                     /gene="LOC139840585"
                     /note="Arginine methyltransferase-interacting protein,
                     contains RING Zn-finger [Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; Region: AIR1; COG5082"
                     /db_xref="CDD:227414"
     misc_feature    790..>912
                     /gene="LOC139840585"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    1582..1926
                     /gene="LOC139840585"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty3; cd09274"
                     /db_xref="CDD:260006"
     misc_feature    order(1594..1605,1690..1698,1705..1707,1780..1782,
                     1879..1881,1921..1923)
                     /gene="LOC139840585"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260006"
ORIGIN      
        1 atggaagagg ctgcccactc ttctatcgcc tcgttgatta aagaggaatt tgataagcga
       61 atgccccaac ttttaaatga agcgggtaat ttaagggccg aagggaggca aactgtgaat
      121 catgagattg ttacttcaag gccttatggc ttaaaagact tcaaacttag caatccaccc
      181 acttatgaga gagacctcaa tcccatcaag agcactcgat ggatttctga tattgagggt
      241 tgctttagga caacgcgatg tcctgaggac ttgaaaacta cgtttggagt gtgtatgtta
      301 aggggtgttg ctcaaagatg gtgggatgat cttcttgcga tacaagggaa tgactacgcg
      361 gagaggttga cttggggaga attcaagcgt gaatttttca aaaattttcg atcagaggcc
      421 gaagtgggac gattgaagtc tgaactccaa aatactcatc aagggagtat ggacttgaat
      481 acatttcgag ttcactttat agatcgactt caatttaatt ctgagtatat taatgatgaa
      541 atggggaaat gtagattgtt tcatggttta ttgcgtgaag aaattagaga gaggctaatt
      601 atatctcaat ttcgttcttt ccctgatttg tttgatgctg cgagggatgt tgaaaatgaa
      661 cttgttaaga agggtgcgat aacgtataag aaggaaaatt tcaactcgaa gaggaagttt
      721 gaacaaagtg gttcgcctaa taaaaagaca aaaggtaatg aagggaggaa aggcggaggt
      781 tgtaacctag gtcaattgtg tttcacatgt ggcaaactgg gccacatttt aagggattgt
      841 aagtctacta ttcccaaagc tactatttgt ttcaattgtc atgatgaagg gcatcgaaag
      901 gcctattgtc ctaaattatc tgagttcgag agaaaggaag agcaacggaa ggaggtgata
      961 agaaggttag aaaagtcggc gggcacgcca aagagtaggt cttttcagat gactgtggat
     1021 gaagctctaa ggtcatcaga agtagtagca ggtccctgtc ttattatccg ggtgaaaacc
     1081 ccaagtaggg aagaagtaat tattcaagga gaaggacagc gacggcccgc ttctatatgc
     1141 acttatgctc gtgcacgtcg tcttgtgtct agtggttgtg cagccttttt ggctcatgtt
     1201 gttgactctc gaaaagaatc aaagtttatc gaagatctcc cggtagttag ggactataaa
     1261 gatgtgtttc cggatgatct tccgggtgtt cctcctgaaa gacaagtaga atttcgcata
     1321 gagttgattc cgggtgctgc acctattgtt aagactccct atcgcttagc gccaactgaa
     1381 atgcaagaac taatgagtca acttcaagaa ctattggata aagggttcat tcgtctaagt
     1441 aattcaccgt ggggagcacc gttgacacga aagaatgtaa agttcgattg gggtaatgac
     1501 caagaagtag cctttcaatt gttaaagcat aagctaagtc atgctccggt gttggtatta
     1561 ccggaaggaa ccgaagatat gaccgtttat tgtgatgcat cgattaacgg tcttggttgt
     1621 gtcttgatgc aaaaaggaag ggttattgca tatgcttcaa ggcaattaaa ggagcaagaa
     1681 aagaactatc ctatacatga tcttgagcta gcggcggtgg ttcatgcttt aaaattttgg
     1741 cgtcattact tgtatggcat taaatgtaca atttatacgg accacgagag tttgaagtac
     1801 cttttcaacc aaagatattt gaataaccga caacggaggt ggttggatct cttaaaggat
     1861 tatgattgtg agatacttta tcattcgggt aaagctaatg ttttagcgga cgccttgagt
     1921 cgaaagaatc aatacccggg gatacgagta gaatctttac gtatggtcat aacaaatgaa
     1981 ttccttaaaa agcttggtga aattcaagtt gaaactttcg ttcataacaa acatgaagaa
     2041 cgaattaagg gacaaacaga atccattaaa ttaggtccgc atgggttgtt gtcttttaat
     2101 ggaatagtgt gggtgccaaa gataggtgaa taccgataa
//
LOCUS       XM_071830845             978 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides D-galacturonate
            reductase-like (LOC139840586), mRNA.
ACCESSION   XM_071830845
VERSION     XM_071830845.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..978
                     /gene="LOC139840586"
                     /note="D-galacturonate reductase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139840586"
     CDS             1..978
                     /gene="LOC139840586"
                     /codon_start=1
                     /product="D-galacturonate reductase-like"
                     /protein_id="XP_071686946.1"
                     /db_xref="GeneID:139840586"
                     /translation="MMAISIPETTINSSNGRPVPLIGMGVAKSANDGNTEKVKAAIIE
                     AIKVGYRHFDTAAVYGTEQPLGEAIEEALRLSLIKSRTELFVTTKLWCNATESHLVLP
                     AIKQSLKNLRLEYVDLYLIHWPVTLKCEGYKFPIPNECVSAINIKQVWEAMENCQNLG
                     LSKSIGVSNFNPRRLEEILSFAKIPPVVNQVEMNPIWQQKKLNEFCKKHDILLTGYSP
                     LGAAGSSWGHNRVMESDVLQDIAKSRGKSIAQISLRWLYEQGVSFVVKSFNKERMKQN
                     LEIFDWSLSEEELNRISQIPQQKHTYFGKMMAEPNNDVIAEIDEDLSFM"
     misc_feature    43..891
                     /gene="LOC139840586"
                     /note="AKR4A and AKR4B families of aldo-keto reductase
                     (AKR); Region: AKR_AKR4A_4B; cd19124"
                     /db_xref="CDD:381350"
     misc_feature    order(73..81,160..162,175..177,265..267,364..369,502..507,
                     568..570,646..666,745..747,790..801,814..816,826..828)
                     /gene="LOC139840586"
                     /note="active site"
                     /db_xref="CDD:381350"
     misc_feature    order(160..162,175..177,265..267,364..366)
                     /gene="LOC139840586"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381350"
ORIGIN      
        1 atgatggcaa ttagcatccc ggagacaacc ataaactcta gcaacggtag accggttccc
       61 ttgatcggaa tgggtgtggc taaatcggcg aacgatggca atactgaaaa ggtgaaagcg
      121 gctataattg aagccatcaa ggttggttat cgacactttg atactgcagc agtctacggg
      181 actgaacaac ctcttggaga agccatcgag gaagctttga gactcagttt gataaagtcg
      241 cgaaccgagc tttttgttac gaccaaactg tggtgtaatg cgactgaaag ccaccttgtg
      301 ttaccggcca taaagcagag tttgaagaat ttgagacttg agtacgtgga tttgtatcta
      361 attcattggc cagtaacact caaatgtgag ggatacaaat ttccgattcc aaatgagtgt
      421 gtatcagcta taaatattaa gcaagtttgg gaagcaatgg aaaactgtca aaatctcgga
      481 ctcagcaaat cgataggtgt aagcaacttc aatcctcgaa gacttgaaga gatcctttcc
      541 ttcgctaaaa tccctccggt tgtcaaccag gttgagatga acccaatttg gcagcagaaa
      601 aaactgaatg aattttgcaa aaagcatgat atccttctca ccggttactc gcctttagga
      661 gcagccggca gttcatgggg tcacaatcgt gtcatggaat cagatgttct tcaagacatt
      721 gctaagtcca gaggaaagtc aatagcacag atatcgctaa gatggttata tgaacaaggt
      781 gtgagctttg tagtaaagag ttttaacaaa gagaggatga agcaaaactt agagatattt
      841 gattggtcat tgagtgagga ggagttgaac aggattagcc aaattcctca acagaaacat
      901 acttattttg gaaagatgat ggctgagccc aataatgatg taattgctga gatcgatgaa
      961 gatctctcat ttatgtaa
//
LOCUS       XM_071830847             843 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840588), mRNA.
ACCESSION   XM_071830847
VERSION     XM_071830847.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..843
                     /gene="LOC139840588"
                     /note="uncharacterized LOC139840588; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840588"
     CDS             1..843
                     /gene="LOC139840588"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686948.1"
                     /db_xref="GeneID:139840588"
                     /translation="MVLKDKFNRLYRLDTNKFATILDRARWEGGNFHATWCWSRDISG
                     RLAGDLTTLTNLLSSFVPCSSGKEEWSWSWSKDGSFSVHKLTDILVQSSPDIATVSIK
                     SLRNKLVPLKVELFIWRTRHKRLPTRVELDKRGMDLGTVRCPVCDNGLESVEHSIILC
                     TFAFDIWNRVYDWWKLGPFTNLGINESFLGNGYNFTSDLGKLLWQATEWVTGYMIWKS
                     RNAFTFTKIKPTCAMVFKDIQLKCFEWISNRIKGTNIEWDVWLANPRGYDSLALSSRR
                     SGIG"
     misc_feature    <316..489
                     /gene="LOC139840588"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggttctta aagacaaatt taataggctt tatagactag acacaaataa atttgccaca
       61 attcttgacc gggcgagatg ggagggcggg aactttcatg ccacgtggtg ttggtcccgc
      121 gatatctcgg ggagattggc cggggacctc accactctta ctaatctttt atctagtttt
      181 gtcccgtgta gctcaggtaa agaagaatgg tcatggtctt ggagtaagga tggctcgttt
      241 tcggttcaca agcttacaga tattctggtc cagagcagcc ctgacatcgc aaccgtgagc
      301 ataaagtcgc tccgcaacaa actggtcccc ctcaaagttg agttgtttat ttggcgtact
      361 cgacacaaaa ggttacctac aagagttgaa cttgacaaga gaggtatgga cttgggtacg
      421 gtacgttgtc cggtttgtga caatggttta gaatcagtag agcactccat catcttatgc
      481 actttcgctt ttgacatttg gaatcgtgtc tatgattggt ggaagctcgg cccttttaca
      541 aacttgggta taaatgaatc ttttcttgga aatggatata acttcacctc cgacttggga
      601 aaactgttgt ggcaagctac ggaatgggtt acgggataca tgatttggaa aagtaggaac
      661 gctttcactt tcactaagat aaaaccgaca tgcgcaatgg tattcaaaga catccaactt
      721 aaatgcttcg aatggatctc taataggatc aaaggcacca atattgaatg ggatgtctgg
      781 cttgcaaatc cacgaggtta tgattcgcta gctttatcgt ctaggagatc cgggataggt
      841 taa
//
LOCUS       XM_071830848             741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840589), mRNA.
ACCESSION   XM_071830848
VERSION     XM_071830848.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..741
                     /gene="LOC139840589"
                     /note="uncharacterized LOC139840589; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840589"
     CDS             1..741
                     /gene="LOC139840589"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686949.1"
                     /db_xref="GeneID:139840589"
                     /translation="MAYSSSDNEYTMLALMLEADQSDEGDSSNVHLTRHYIRRDHHEA
                     HDHLIRDYFAERPKYSEVEFKHRFRMRRRVFNRIMEGILNFSANRLTKYLEWFHVRPD
                     CRGELGISTHLKITAALRQLAYGYTPDALDEYLQMSERVARESLKNFTKCIVVLYSND
                     YMCEPTREDMERLYKVHEEKHDFPGMLGSIDCMHWVWGKCPVAWQGQFKRGDHSHPTI
                     MLEAVASYDNWIWHAYFGVAGSNNDINV"
     misc_feature    481..>738
                     /gene="LOC139840589"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcttatt catcttccga caatgagtat acgatgcttg cactcatgtt agaggccgat
       61 caaagtgatg agggggatag ttctaatgtt catttaacac ggcattatat cagacgtgat
      121 caccatgaag cacatgatca cctcataaga gactattttg ctgaacgtcc gaagtatagc
      181 gaagtggagt tcaaacatcg atttcgaatg aggagacgtg tattcaaccg aattatggaa
      241 ggtatattaa atttttctgc aaatcgttta actaaatatt tggaatggtt tcatgttaga
      301 cctgattgcc gtggcgagtt aggcattagt acacatttaa aaataacagc ggcacttcgt
      361 cagttggctt acggttatac acccgatgcg ttagacgagt atttacaaat gtcggaacgt
      421 gtagctcgtg aaagtttaaa gaattttacg aaatgtattg ttgttttata ttcaaatgat
      481 tatatgtgcg agcctactcg tgaggacatg gaacgtttat acaaggttca tgaggaaaag
      541 catgactttc ccggcatgct aggtagtata gattgtatgc attgggtttg gggaaaatgt
      601 ccggttgcat ggcaaggcca atttaagcga ggagatcata gtcatccaac tattatgctt
      661 gaagccgttg cctcgtatga taattggata tggcatgctt attttggggt tgctgggtca
      721 aacaatgaca taaatgttta a
//
LOCUS       XM_071830849             528 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840590), mRNA.
ACCESSION   XM_071830849
VERSION     XM_071830849.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..528
                     /gene="LOC139840590"
                     /note="uncharacterized LOC139840590; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840590"
     CDS             1..528
                     /gene="LOC139840590"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686950.1"
                     /db_xref="GeneID:139840590"
                     /translation="MLNDNFPDIPYVINGVEYKRGYYLADGIYPQWASFVKAYSSAAD
                     PKSKYFSRKQSKARKDVERTFGILQGRWHILQQPVRAYSLKAIQRIMYACIIMHNMIV
                     EDNGLNISKNNWVYELVQNMQTTWYDRCEEYKATTKELHDREVHERLRVDLVEHVWAI
                     RAQEEEEEEEDEGEE"
     misc_feature    <1..318
                     /gene="LOC139840590"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcttaatg ataatttccc agacatccct tatgttatta atggtgtgga gtacaaaagg
       61 ggttattatt tagcggatgg gatttaccct caatgggcat cgtttgttaa agcgtattcg
      121 agtgcagctg atcccaagag taaatacttt tcacgcaaac aatctaaggc aagaaaggat
      181 gttgagagga cttttggtat tttacaagga cgttggcata tactacaaca acctgtaagg
      241 gcttattcgt tgaaggctat tcaaagaatt atgtatgcat gtatcataat gcataacatg
      301 atagttgaag ataatgggtt aaacatttct aagaataact gggtgtatga actggttcag
      361 aacatgcaaa ctacttggta cgatagatgt gaagagtata aagccacgac gaaggaatta
      421 cacgatcggg aggtgcatga acgtttacga gtcgatttag tcgaacatgt ttgggctatt
      481 cgagctcagg aggaggaaga ggaggaggag gacgaggggg aagagtga
//
LOCUS       XM_071830850             798 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840591), mRNA.
ACCESSION   XM_071830850
VERSION     XM_071830850.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..798
                     /gene="LOC139840591"
                     /note="uncharacterized LOC139840591; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840591"
     CDS             1..798
                     /gene="LOC139840591"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686951.1"
                     /db_xref="GeneID:139840591"
                     /translation="MSPNATTPVHHLSLRSVLEKEKLNDTNFLDWYHNLRIVLKVEKK
                     SYILDGPVPEEPPANATKSIRDAWTKHTDDSTEVACLMLATMIPDLQKDLEHHDAFEM
                     LKKLKEMFQQQARQQCFETVRALHACKMAEGTSVSSYVLKMKSYIDQLERLGSSIGPE
                     LAIDLILNSLPKSYDQFVLNYNMNNWEKSISELHLMLKTAEKNIPSKTSEALMIREGK
                     IKKPKAKGKGKGKPKSRGNYKGKKFVPKDSVKKKEKPAKDATCFHCG"
     misc_feature    292..579
                     /gene="LOC139840591"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcaccca atgcaactac acctgttcac cacctttctc taagatctgt cttagagaag
       61 gaaaaactca atgatacgaa cttcttagac tggtatcata atttgagaat tgttctcaaa
      121 gtcgaaaaga agtcttatat acttgatgga cccgttcctg aggaaccccc tgctaatgcc
      181 acaaagagca tccgagatgc ttggactaag cacacggatg actccacaga ggtagcatgc
      241 ctcatgttag ccaccatgat tccagacttg caaaaagacc tggagcatca tgatgccttt
      301 gagatgctta agaagctaaa ggaaatgttc caacaacaag ctaggcaaca atgctttgaa
      361 actgtcagag cgttacacgc atgcaagatg gcagagggga catctgtaag ctcttatgtt
      421 ctaaaaatga agagctacat agatcaactt gagaggcttg gatcttccat tggtcctgag
      481 ttggcaatag acttgatcct caactcacta ccaaagtcat atgatcagtt cgtcttgaac
      541 tacaatatga acaattggga gaaatctatc tcggagttgc atttaatgct taagactgcc
      601 gagaaaaata ttccatccaa aacctctgaa gccctcatga ttcgggaagg aaaaatcaag
      661 aaaccaaaag ccaaaggcaa aggtaaaggc aaacctaaga gtcgaggcaa ctacaaagga
      721 aaaaagtttg tcccaaagga ttctgtcaag aagaaagaaa aacctgctaa agatgccact
      781 tgtttccatt gtggataa
//
LOCUS       XM_071830851             699 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840592), mRNA.
ACCESSION   XM_071830851
VERSION     XM_071830851.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..699
                     /gene="LOC139840592"
                     /note="uncharacterized LOC139840592; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840592"
     CDS             1..699
                     /gene="LOC139840592"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686952.1"
                     /db_xref="GeneID:139840592"
                     /translation="MSPNATTPVHHLSLRFVLEKEKLNDTNFLDWYRNLRIVLKVEKK
                     SYILDGPVPEEPPANATKSIRDAWTKHTDDSTEVACLMLATMIPYLQKDLEHHDAFEM
                     LKQLKEMFQQQARQQRFETVRALHACKMAEGTSVSSYVLKMKSYIDQLERLGSSIGPE
                     LAIDLILNSLPKSYDQFVLNYNMNNWEKSISELHLMLKTAEKNIPFKTSEVLMIREGK
                     INTNNIFRYDLICY"
     misc_feature    <367..579
                     /gene="LOC139840592"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcaccca atgcaactac acccgttcac cacctttctc taagatttgt cttagagaag
       61 gaaaaactca atgatacgaa cttcttagac tggtatcgta atttgagaat tgttctcaaa
      121 gtcgaaaaga agtcgtatat acttgatgga cccgttcccg aggaaccccc tgctaatgcc
      181 acaaagagca tccgagatgc ttggactaag cacacggatg actccacaga ggtagcatgc
      241 ctcatgttag ccaccatgat tccatacttg caaaaggacc tggagcatca tgatgccttt
      301 gagatgctta agcagctaaa ggaaatgttc caacaacaag ctagacaaca acgctttgaa
      361 actgtcagag cgttacacgc atgcaagatg gcagagggga catctgtaag ctcttatgtt
      421 ctgaaaatga agagctacat agatcaactt gagaggcttg gatcttccat tggtcctgag
      481 ttggcaatag acttgatcct caactcacta ccaaagtcat atgatcagtt cgtcttgaac
      541 tacaatatga acaattggga gaaatctatc tcggagttgc atttaatgct taagactgcc
      601 gagaaaaata ttccattcaa aacctctgaa gtcctcatga ttcgggaagg aaaaataaat
      661 accaataaca tatttagata tgatctaata tgttattaa
//
LOCUS       XM_071830852             624 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840593), mRNA.
ACCESSION   XM_071830852
VERSION     XM_071830852.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..624
                     /gene="LOC139840593"
                     /note="uncharacterized LOC139840593; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840593"
     CDS             1..624
                     /gene="LOC139840593"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686953.1"
                     /db_xref="GeneID:139840593"
                     /translation="MIVLSLNIRGIRKDGKARWIRSLCGKENPWVTALQETRCGTYKE
                     SFITYCWGSSNFKYVQKDPIGFSGGSLLIWNPTIIKVNEAIEGEFFLAIKGKIEGIDP
                     EVAIVNVYGPHSTPKKIRFWDSLEALISQINMPWLICEDFNEVRSQSERFNCEFNPNW
                     ANRFNDIINRLRLIDIPLGGKKFTRVCDNGITFSKLDRFLISEEFNQ"
     misc_feature    7..615
                     /gene="LOC139840593"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgattgtgc tatctttgaa cattagaggt attaggaaag atggtaaggc tcgatggatt
       61 cgctctctat gtggtaaaga aaacccttgg gtcacggctc ttcaagaaac gaggtgtggt
      121 acctacaaag aatcgttcat tacatattgt tggggatcgt ccaacttcaa atatgttcaa
      181 aaagatccga taggattctc tggagggtca ttgttaatat ggaatcccac aataattaaa
      241 gtaaacgagg caatagaagg agagttcttt ttagctatca aaggcaaaat cgaaggcatt
      301 gatcccgaag tggccatagt aaacgtatac ggtcctcact ccacaccaaa gaaaatacgt
      361 ttctgggaca gtctcgaggc tttaatttct cagattaata tgccttggtt aatctgcgag
      421 gatttcaatg aggttagatc tcaatccgaa aggtttaact gcgagttcaa tccaaactgg
      481 gcaaatagat ttaacgacat catcaacaga ctacgtttaa tcgacatccc acttggtggg
      541 aaaaaattca ctcgtgtgtg tgataacgga atcacattca gtaagctgga cagattcttg
      601 atttcagagg agttcaatca atga
//
LOCUS       XM_071830853             300 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg01250-like (LOC139840594), mRNA.
ACCESSION   XM_071830853
VERSION     XM_071830853.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..300
                     /gene="LOC139840594"
                     /note="uncharacterized mitochondrial protein
                     AtMg01250-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840594"
     CDS             1..300
                     /gene="LOC139840594"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg01250-like"
                     /protein_id="XP_071686954.1"
                     /db_xref="GeneID:139840594"
                     /translation="MKCIGFGTKWISWIKECLKSASISILFNGSPTKEFSLEKGVRQG
                     DPLSPYLFILAAEGLNVLTKKALDVGLIKGAEVGKQKIVVSHLQYADDTILWGME"
     misc_feature    <118..>291
                     /gene="LOC139840594"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    130..132
                     /gene="LOC139840594"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgaaatgca taggttttgg cactaagtgg atatcttgga taaaagaatg tctcaaatct
       61 gcgtccatat caatactttt taatggctct ccaacaaagg aattctcgct cgaaaagggt
      121 gtccgtcaag gtgacccgct ttccccatat ctatttattt tggcggccga gggattaaat
      181 gtattaacta aaaaagctct agatgtgggt cttataaaag gagctgaagt cggaaaacaa
      241 aaaattgtag tttctcatct ccaatacgca gacgatacta ttctttgggg aatggagtag
//
LOCUS       XM_071830854             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840595), mRNA.
ACCESSION   XM_071830854
VERSION     XM_071830854.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139840595"
                     /note="uncharacterized LOC139840595; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840595"
     CDS             1..576
                     /gene="LOC139840595"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686955.1"
                     /db_xref="GeneID:139840595"
                     /translation="MGCEVGSLSFTYLGLPIGCNMRKLKDWSFVVDKFNKKLSDWKAK
                     TMSFGGRITLIKSVLSSLPLYAFSLFRAPSCTINSLEDFSNTFVRLISDGKEILFWKD
                     KWLGEQSLCVTFDRLFRMDENKDVRIKDRIIQHGSSYSLNWCWNRTLTGRTATELEQL
                     QAMLTGFKFADKENDSWTWSLSGSGISLQTF"
ORIGIN      
        1 atgggatgtg aagttggatc tctttctttc acttatcttg gactcccaat tggatgtaat
       61 atgaggaaat taaaagattg gagttttgtc gtggataaat tcaataaaaa gttatcggat
      121 tggaaagcga agacgatgtc ttttggtggc cgcatcactc taataaagtc ggtgcttagt
      181 agccttccgc tgtacgcctt ctccctattc cgtgctccat catgtaccat taactcgcta
      241 gaagattttt ctaacacttt tgtgagactc ataagtgatg gcaaagagat cttgttttgg
      301 aaggataaat ggctcggaga acaatcgctt tgtgttactt ttgatcgact tttcagaatg
      361 gatgaaaata aagatgtgcg gataaaagat cgaattattc aacatggctc aagttattcg
      421 ctaaactggt gctggaacag gactcttaca ggcagaacag ctactgaatt ggagcagctt
      481 caggcgatgt taacaggctt caaattcgca gacaaggaaa atgattcttg gacatggtct
      541 ttaagtggta gtggaatttc tctacaaaca ttctga
//
LOCUS       XM_071830855             882 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840596), mRNA.
ACCESSION   XM_071830855
VERSION     XM_071830855.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..882
                     /gene="LOC139840596"
                     /note="uncharacterized LOC139840596; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840596"
     CDS             1..882
                     /gene="LOC139840596"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686956.1"
                     /db_xref="GeneID:139840596"
                     /translation="MSQILFNAFDKWDSDDLEDLEFLRAMAEEIDAEEAEEHVNNERV
                     PRSRTYIHRDREQAGEICILELYVDEYLRKPTSSDIARMYSAHEEKHSFKGMLGSIDC
                     MHWQWRNCPVAWKGQYTSGHQKHPTIVLEAVASYDTWIWHAFFGTAGANNDVNVLNQS
                     SLFDDIKNGTAPFAPFTVNADGIYPDWATLIKAYSTPTEEPRIKFKRFQENARKDVER
                     TFGVLQVEDNGFNISWLEEELLNTREANPNFVRNRSTSRDVRDQEIRDRNIHDQLRED
                     LTQHIWDLPPNFRTLNA"
     misc_feature    205..672
                     /gene="LOC139840596"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcacaaa ttttgtttaa tgcttttgat aagtgggatt ccgatgatct tgaagatttg
       61 gaatttttac gagcaatggc cgaagaaatt gatgctgaag aggctgaaga acatgttaac
      121 aacgaacgag ttccacggtc tcgaacatac attcatagag atcgtgaaca agcaggtgaa
      181 atatgtattt tggaacttta tgttgatgaa tatttgagga aaccaacgag tagcgatata
      241 gctcgtatgt atagcgctca tgaagaaaaa cacagtttta agggaatgct tggaagcatc
      301 gactgcatgc attggcagtg gaggaattgt ccagttgctt ggaaagggca atatacgagt
      361 ggtcatcaaa aacacccaac cattgttctt gaagccgttg cttcatatga tacgtggatt
      421 tggcatgcat tctttggtac tgcgggtgct aacaacgatg ttaatgtttt gaatcaatct
      481 tcgttgtttg atgacatcaa aaatggaact gcaccatttg caccatttac agtaaatgcc
      541 gatggcatat acccagattg ggcaacatta atcaaggcgt attcgacccc aaccgaagag
      601 ccccgtataa aatttaaacg cttccaagaa aatgcccgta aagatgttga gagaacattc
      661 ggtgttcttc aggttgagga taatggcttc aacatttcat ggctcgagga agaattactt
      721 aacactagag aagctaatcc taactttgta aggaatcgat ctacaagtcg tgatgtaaga
      781 gatcaagaaa tacgagatag aaacattcat gaccaactcc gagaagatct cactcaacac
      841 atttgggacc ttccaccaaa ctttagaact ttaaatgctt aa
//
LOCUS       XM_071830856             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840597), mRNA.
ACCESSION   XM_071830856
VERSION     XM_071830856.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139840597"
                     /note="uncharacterized LOC139840597; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840597"
     CDS             1..441
                     /gene="LOC139840597"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686957.1"
                     /db_xref="GeneID:139840597"
                     /translation="MAFSSSSQFLFTSPKFTTNHQINFSKSHSSKISANFATAERTTS
                     TTRITTTTTHTSLYDILGIQIEANTVEIKAAYRKLARVLHPDVGNHDSSADEFMKLHS
                     AYATLSNPGKRADYDRTLFGRHVAVLNSSPAGYAGHRWETDQCW"
     misc_feature    169..351
                     /gene="LOC139840597"
                     /note="DnaJ domain; Region: DnaJ; pfam00226"
                     /db_xref="CDD:395170"
     misc_feature    order(250..258,283..285,289..294,301..306)
                     /gene="LOC139840597"
                     /note="HSP70 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99751"
ORIGIN      
        1 atggcatttt catcatcatc acaattctta ttcacttccc ccaaattcac aaccaatcac
       61 caaattaact tttccaaatc acattcctct aaaatctccg ccaatttcgc aacagctgaa
      121 cgtacaacat ccactacacg aattacaaca acaacaactc atacgtcact ctatgatatc
      181 ctcgggattc aaatcgaagc caatacggta gagatcaaag cggcgtaccg gaaattagct
      241 agagttttgc atccggatgt cggaaatcat gattcgtcag ctgatgagtt catgaaactg
      301 cattctgctt acgctacgtt atctaatcca ggaaaacgag ccgattatga tcgaacttta
      361 ttcggaagac acgtggctgt cctgaattca tctccggccg gttatgctgg tcaccgatgg
      421 gaaactgatc agtgttggta g
//
LOCUS       XM_071830857             426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840598), mRNA.
ACCESSION   XM_071830857
VERSION     XM_071830857.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..426
                     /gene="LOC139840598"
                     /note="uncharacterized LOC139840598; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840598"
     CDS             1..426
                     /gene="LOC139840598"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686958.1"
                     /db_xref="GeneID:139840598"
                     /translation="MHSTRCPTCDNGIETLEHVLLTCNFAKDILERIRLWWNLDQLYL
                     SNCSDLEKGSNPMFKTSTGSSIWQATIWVSSYLIWKNRNDFTFGNSKVCPLKIVSDIQ
                     AKSFEWINCRAKQVKLDWLNWINNPRFFDVNPVAKKGIG"
ORIGIN      
        1 atgcattcaa cgagatgccc gacatgcgac aatggtattg aaacactcga acatgtcctt
       61 ttaacctgta atttcgcaaa agatatattg gaaagaattc gactttggtg gaatctagac
      121 caactatatc tttctaattg ttcagatctc gagaaaggct ctaatcctat gttcaaaacc
      181 tcaacgggat cctccatctg gcaggcaact atttgggttt cgagctatct gatttggaaa
      241 aatcgtaacg atttcacttt cggtaacagt aaagtatgcc ccctgaaaat tgtttctgac
      301 atccaggcta aatcttttga atggataaat tgtcgagcta aacaagtcaa gcttgattgg
      361 ctaaattgga taaacaatcc gagatttttt gatgtcaacc ctgtagcaaa aaagggaata
      421 ggctaa
//
LOCUS       XM_071830858             327 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840599), mRNA.
ACCESSION   XM_071830858
VERSION     XM_071830858.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..327
                     /gene="LOC139840599"
                     /note="uncharacterized LOC139840599; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840599"
     CDS             1..327
                     /gene="LOC139840599"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686959.1"
                     /db_xref="GeneID:139840599"
                     /translation="MLKVSRWKGVIRIRKRGKLSQRYVGPILITKKIGPVVYKLKLPP
                     ELSGIHNSFHVSNLKKCLTDVNLAIPLEELRIDDKLHFVKEPIEVMDREVKKLKHSRI
                     PIVKVR"
ORIGIN      
        1 atgctaaaag tatctcgatg gaagggagta atacgaatta ggaagcgtgg aaaactaagc
       61 cagagatatg taggacctat tttgattact aagaaaattg gtccagttgt atataaatta
      121 aaactaccac cggagcttag tggtattcat aattcatttc atgtttcgaa cttgaagaag
      181 tgtttaacag atgtgaattt agcaattcct ttagaggaac taagaatcga tgacaaattg
      241 cattttgtca aggaaccaat agaagtgatg gatcgtgaag tgaaaaagtt gaagcatagt
      301 aggattccga ttgttaaagt tcgttga
//
LOCUS       XM_071830859             912 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840600), mRNA.
ACCESSION   XM_071830859
VERSION     XM_071830859.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..912
                     /gene="LOC139840600"
                     /note="uncharacterized LOC139840600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840600"
     CDS             1..912
                     /gene="LOC139840600"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686960.1"
                     /db_xref="GeneID:139840600"
                     /translation="MNRNTWMYEIPRHTSEYLAELNNFMEVAEADRVNKGNEKISCPC
                     KNCQNFDSYIDSSVITQHLIVDGFVEDYTCWSWHGEFLSDNPIDDKCNTDHNATNDND
                     VDINFDSDMDDYIDNLDDMLHDVDVDGNIDENNYDKFQQMFVDSEKPLYTGCTKFSKL
                     SAVLRLLNLKTNNGWSDTSFTELLKLLHEMLSDDNELPVSLYQAKKMLCPMGLQVERI
                     HACPNDCMLYRNEYKDLHKCVICGTSRYKSKRETKISSDVKKNGPPAKVLWYLPIIPR
                     LKRLFSNANDAKLLRWHADERKNDGKL"
     misc_feature    13..240
                     /gene="LOC139840600"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
ORIGIN      
        1 atgaatcgaa atacatggat gtacgagata ccacgtcata cttcagaata tctcgcagag
       61 ttgaataatt ttatggaagt tgcagaagct gatcgggtaa ataaaggcaa cgagaaaatt
      121 tcttgccctt gtaaaaactg tcaaaatttc gacagttata ttgatagtag tgtaattact
      181 caacatctta tagtagatgg atttgtggaa gactatactt gttggtcatg gcatggagaa
      241 ttcttaagtg ataacccaat cgatgataag tgtaatactg atcacaacgc tactaatgac
      301 aatgatgtgg atattaattt cgattccgac atggatgatt atatagataa tcttgatgat
      361 atgttacatg atgtggatgt ggatggtaat attgatgaaa acaattatga taaatttcaa
      421 caaatgtttg tcgactctga aaaaccatta tataccgggt gtacgaaatt ttccaaactt
      481 tcagctgtgt tgagattgtt aaacttaaaa acaaataatg gttggagtga tacaagtttc
      541 accgaacttt tgaaattatt acatgaaatg ctatccgatg acaatgagtt gcccgtttca
      601 ttataccaag ccaaaaaaat gttgtgccca atgggattgc aagtcgaaag aatacatgca
      661 tgtccaaatg attgtatgtt gtatagaaat gagtataaag acctgcataa atgtgtgata
      721 tgtggtacat cgaggtataa gtcaaaaagg gaaacaaaaa ttagcagtga tgtgaagaaa
      781 aatgggcctc cagctaaagt cttgtggtat ttacctatca taccaagatt aaaaagatta
      841 ttttcaaatg ctaacgatgc aaaattgttg cgttggcatg ccgatgagcg taaaaatgat
      901 ggtaaattat ga
//
LOCUS       XM_071830860            2031 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840602), mRNA.
ACCESSION   XM_071830860
VERSION     XM_071830860.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2031
                     /gene="LOC139840602"
                     /note="uncharacterized LOC139840602; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840602"
     CDS             1..2031
                     /gene="LOC139840602"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686961.1"
                     /db_xref="GeneID:139840602"
                     /translation="MLLILLNGGILMIMKILEMRLEIYDLVLVLTELILLGPKQPGND
                     IDIYLAPLIDDLKTLWSPGVQVYDSYKRENFNLRAIIFCTINDFPAYGNLSRYSTKGY
                     KACPLCEDETSSIWLTNCKKPAYMGIVKDFLRITHTVEKKSCLMVRHCIDVMHIEKKI
                     KTKDGINVRKDFEEMKIRTELQPDYRGKKTFLPPACYTLSKTEKTKFCQTLHGIKVPS
                     GYSANIKRLVSLKDNRLLGMKSHDCHVLMTQMILIAIRDILPNGVRHTITKLCLFFNM
                     IHSKVIDPEVLDTYQKDIIITLCQLEMYFPPSFFDIMVHLVSHIIYEIKACGPVFLRY
                     MYPFERYMGFLKGYVRNYSRPEGSIIEGYLSEEVSTFCTDYLTGARNIGLPQSRHEGR
                     LQGVGTISKKVVVVEEDEIHQAHFTVLQHMTCIDPYIHEHMNQLKTKSRGRNEKRLLV
                     EHNKNFSSWLKKRVNDIDVEDQLVKNLGPGPDILVTKYQGYDINGYTFYTHRQDEKST
                     MQNSGVTLIATSTELHENNHDVRATIAKNSYYGVIQEIWELDYHTVTIPLFNCKWVEN
                     KHGVQVDSNGFTIVNLSTNGYSSEPFILAKQATQVFFVQDPKNSKWHIVLHGKRRILG
                     VENVVDEDEYDQFDELPPFSIGVEPINDVIDHTMYLITDHSEGLWIDTPRSK"
     misc_feature    <97..411
                     /gene="LOC139840602"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    829..1140
                     /gene="LOC139840602"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    1639..1845
                     /gene="LOC139840602"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgttgctga ttctcctcaa tggaggaata ttgatgataa tgaagatttt ggagatgaga
       61 ttagaaatat acgatttggt cttagtactg acggaattaa tccttttggg tccaaaacaa
      121 cctgggaacg atattgacat ttatctggct ccgttaattg atgacttaaa aacattgtgg
      181 tctccgggcg tccaagtgta tgattcgtat aaacgtgaga atttcaattt aagggctatc
      241 attttttgca cgatcaatga ctttccagcc tacggaaatt tatcgagata ttcaacgaaa
      301 gggtataagg catgtcccct ttgtgaagat gagacatcat ctatatggtt gacaaactgt
      361 aagaaaccag cttacatggg aatcgtaaag gacttcctaa gaatcaccca taccgtagaa
      421 aaaaagagtt gtttgatggt ccgccattgc attgatgtta tgcatattga aaaaaaaata
      481 aaaacaaaag acggaattaa tgttcgaaag gactttgagg aaatgaaaat tcgaacggag
      541 cttcaacccg actatagagg aaagaaaacg tttctcccac cagcttgtta caccctttca
      601 aaaaccgaaa aaacaaaatt ctgtcaaact ttgcatggaa ttaaggtccc atctgggtat
      661 tctgctaaca ttaaaaggtt ggtgtcatta aaagacaata gattactcgg aatgaagtct
      721 cacgattgtc atgttttgat gacacaaatg attcttatcg caattcgtga catacttcca
      781 aacggcgtcc gacacactat cacaaagctt tgtttatttt ttaacatgat tcattcgaaa
      841 gtgattgatc ccgaggtgct ggatacgtat caaaaagata ttatcatcac tctttgccag
      901 cttgaaatgt attttcctcc ctcatttttc gatatcatgg ttcaccttgt atctcatatt
      961 atatatgaaa taaaggcatg tggtcctgta ttcttacgat atatgtatcc atttgagagg
     1021 tatatgggtt tcttgaaagg atatgtacga aattattctc gaccagaggg gagtattatt
     1081 gaaggatatc tttcagagga ggtgagtaca ttttgtacag attatctgac aggtgcaaga
     1141 aatattgggc tcccacaatc tcgccatgaa ggtagacttc aaggagttgg gactattagc
     1201 aagaaagtgg tagttgttga agaagatgaa attcaccaag ctcattttac tgttctacaa
     1261 cacatgacat gtattgatcc atacatacat gaacacatga atcaattgaa aaccaagagt
     1321 cggggtagga atgaaaaaag gttgcttgtt gagcataaca agaatttctc atcatggttg
     1381 aaaaaaaggg taaatgatat agacgttgag gatcagttag tgaagaattt gggccccggt
     1441 cctgatattc tggtcacaaa ataccaaggc tatgatatca atgggtatac attttatact
     1501 catcgacaag atgaaaaaag tacaatgcaa aatagcggtg tcactctaat agccacatca
     1561 acggaactcc atgaaaataa tcatgatgta agggcaacaa ttgctaaaaa ctcttattac
     1621 ggcgtgattc aagaaatttg ggaattggat tatcacacag tcactatacc gttatttaat
     1681 tgtaaatggg tcgaaaacaa acatggtgta caagttgaca gtaacggttt cacaattgtc
     1741 aacctttcca ctaatggtta ttcttcagag ccatttattt tagctaaaca ggccactcaa
     1801 gttttttttg ttcaagaccc aaaaaattca aaatggcaca ttgtccttca tggtaaacga
     1861 cgcatacttg gagttgagaa tgttgtagat gaagatgaat atgaccagtt tgatgagcta
     1921 cctccatttt ctatcggagt tgaaccgata aatgacgtta ttgatcatac catgtacttg
     1981 ataactgatc acagtgaagg tttatggatt gatacacccc gttcaaaatg a
//
LOCUS       XM_071830861            1476 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            phosphatase 7 long form homolog (LOC139840603), mRNA.
ACCESSION   XM_071830861
VERSION     XM_071830861.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1476
                     /gene="LOC139840603"
                     /note="serine/threonine-protein phosphatase 7 long form
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139840603"
     CDS             1..1476
                     /gene="LOC139840603"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /protein_id="XP_071686962.1"
                     /db_xref="GeneID:139840603"
                     /translation="MAQTNQVRVRSEPIDSSLLFLQAERNHRSYALFTKKLDEEFLIK
                     PRRADLSFWQHISRLQNETIDERVQVYLDNLGLDLVCKLGKQRLDWSLVTAMVERWRP
                     ETHTFHLTIDGDVFSGIWYETNDSDWIPFVVTYLGIAPQAIGDRGIKKGRILISVLMA
                     ELEEVVGDTIESHQQRARVYILAMMGGVLFSDSNAYDVPLSFLHTILDLSPANRISWG
                     RAVLAHLYRNLCKAATNYEAKAINGSLLLVQQWVYERIPSLTPILKNDVRKIPADLPP
                     NQIPLIRAPYGSRWHGKRTNKNTPAHVLSTFIWQPYDDLLFARLPQQCAADRPLWSYC
                     GAIIFWATVETHLPDRVCRHFGWGQPIPGVEHLLPAQTHHYLHKINLCMKRSADLRTI
                     APHVTYIAQWNDRANRLFVGRDGGGVSRDYYDWYKTRTVVHITDPGIDEGTNTYPNWA
                     GTTNVYEEGLWKMQDMAFAQMQPNSQPNPQAFYDMPHQLLS"
     misc_feature    259..1281
                     /gene="LOC139840603"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 atggctcaaa cgaaccaagt acgtgttaga tcggagccga ttgatagttc tttattgttt
       61 ttacaagcgg aaaggaatca tagatcatat gcactattta caaagaagct tgacgaggag
      121 tttttgatca aaccaagaag agctgatctg agcttttggc agcatatttc aaggctacaa
      181 aacgaaacaa ttgatgagag ggtgcaggtg tatcttgata atctggggtt agatttagtt
      241 tgtaaattgg gtaaacaaag actcgattgg tcacttgtta ctgctatggt tgaaagatgg
      301 cgcccggaga cgcatacgtt tcatttaacg attgacgggg atgtattctc cggtatttgg
      361 tatgaaacaa atgatagcga ttggataccg tttgtcgtta cctacttagg gatcgctcct
      421 caggctattg gtgatagggg tataaagaaa gggaggatat taatttctgt tttaatggcg
      481 gagttggaag aagttgttgg agacactatc gagtctcacc aacagcgggc tagagtatat
      541 attttagcta tgatgggtgg cgttctattt tctgattcta atgcatacga tgtccctttg
      601 agtttcttgc ataccatcct ggacttgagt ccagctaatc gtataagttg gggtagagcg
      661 gttctcgcac atctttatag aaatttgtgt aaagcggcca caaactatga agccaaggcc
      721 attaatggtt cgctactttt agtacaacag tgggtgtatg aacgaattcc atccctaacg
      781 ccaattctca aaaatgatgt acgaaagatt ccagcggacc tgccaccgaa ccagattcca
      841 ctgattcgag caccctatgg ttctaggtgg catggtaaac ggactaacaa aaatacgcca
      901 gcacacgtat tgtctacgtt tatatggcaa ccctatgatg atttgttatt cgcccgacta
      961 ccccaacaat gcgcagctga cagaccctta tggtcatact gtggcgctat tatattctgg
     1021 gctactgttg agacacatct accggatcgg gtctgcaggc attttggatg gggtcagcca
     1081 attccaggtg ttgaacactt gcttcccgct cagacgcatc attatttaca caaaataaac
     1141 ctttgcatga aaagaagtgc tgatctgagg actattgccc cccacgtcac gtacatcgca
     1201 caatggaatg accgagcgaa ccgtttattt gttggtagag atggtggggg tgtcagtagg
     1261 gattactatg actggtacaa gactcgcact gttgtgcaca ttacagatcc aggaatcgac
     1321 gagggcacca acacatatcc taattgggca gggactacta atgtctatga ggaagggctt
     1381 tggaagatgc aagatatggc atttgcacaa atgcaaccaa acagtcaacc taacccgcaa
     1441 gcattttatg acatgccaca tcagctactt tcatag
//
LOCUS       XM_071830862            1539 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840604), mRNA.
ACCESSION   XM_071830862
VERSION     XM_071830862.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1539
                     /gene="LOC139840604"
                     /note="uncharacterized LOC139840604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840604"
     CDS             1..1539
                     /gene="LOC139840604"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686963.1"
                     /db_xref="GeneID:139840604"
                     /translation="MTDQDLSMLIAVQSVFLTARHRLCMWHITDWVQSAIRLGPICMQ
                     IGSNLQSVGHAISRAGFKFDISNIVWTDKLDPDEFDRRWFSILHKYNLDDHNWLIDMF
                     DLRQKWIPAYFRDLDMSGLMRTSSRSESENHVFQQLMSRSSTLVEFISFFETAMEIQR
                     YEQSKNDHESLYTTPEIETQHPMEKHAGKVFTRAAFFMIQGQMKAATRYCMSYKIQKL
                     SEDTTKFCIGDTSVKTSNIDETIDRIANPYYFDESIQRFSDVIVNRRTKENFATAKCM
                     RELVIFAVTFYMFLEWRLCPKQYFHPSISRDVDQCVHLNKRDPEKMKVYRDLIKDLKD
                     KVFSESGETSMMGSNNDLIPALVGLPQPDNISVHAPQGIRNKVCGNRRIINARQEAIN
                     KKGPAFHKSCKHCGKSQHNVRSCPDLKEQVIREKQIAEKNAKRAADIGNKQGSVSRSG
                     IDLSNDIHGPPSELPRQRTAEEVIKRANSRVNTNCTSDEGFNGAHSKNFAIGGSSHGQ
                     YRFL"
     misc_feature    <1..>663
                     /gene="LOC139840604"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgacagatc aagatctttc aatgctgatt gcggttcaat ctgtgtttct tacagctagg
       61 cataggttgt gtatgtggca cattacagat tgggttcaat ctgcaatcag attgggtcca
      121 atctgcatgc agattgggtc caatctgcaa tcagttggtc atgcaatatc tagagcgggt
      181 tttaaatttg atatttctaa tattgtttgg actgataagt tggatcctga tgaatttgat
      241 cgacgttggt tttcaattct ccataaatac aatcttgatg atcataattg gttgattgac
      301 atgtttgatc ttagacaaaa atggattcca gcttatttta gagatttgga tatgtctggt
      361 ttaatgagaa catcttctcg gtcagagagt gagaatcatg tttttcaaca attaatgagt
      421 aggagttcaa ctcttgttga atttatatct ttctttgaaa ctgctatgga aatacaacga
      481 tatgagcagt ctaagaatga tcacgagtct ctttatacta ctcccgaaat tgaaacgcaa
      541 catcctatgg agaagcatgc aggtaaagtg tttactcgtg cagctttctt tatgattcaa
      601 ggtcaaatga aagctgctac tagatactgt atgagttata aaatacaaaa actgtcggag
      661 gatactacaa agttttgtat aggggacaca agtgttaaaa cttcaaacat tgatgagact
      721 attgacagaa ttgcaaatcc ttattatttc gatgagtcga ttcaaagatt cagtgatgtt
      781 attgtcaatc gtagaacaaa agaaaatttt gcaactgcaa aatgtatgag agagttggtt
      841 atttttgccg tcacatttta tatgttctta gaatggaggt tgtgcccaaa acaatatttc
      901 catccaagta tatcaagaga cgttgaccaa tgcgtacatc ttaataagcg tgatccagaa
      961 aagatgaagg tgtatagaga tttaataaaa gatttgaaag ataaggtttt tagtgaatct
     1021 ggagaaactt caatgatggg ttctaataat gacctgatac ctgctttggt tggacttcct
     1081 cagccagaca acatttctgt tcatgcacca caaggtattc ggaacaaagt atgtggaaac
     1141 aggagaatta taaatgctcg tcaagaagct attaataaaa aaggtccagc atttcacaaa
     1201 agttgtaaac actgtggtaa atcacaacat aatgtaagat cttgcccaga tttaaaagaa
     1261 caagtgatta gagaaaagca aattgcagaa aagaatgcta aaagagcagc agatattgga
     1321 aataaacaag gttctgtttc aaggtctggg atagatcttt caaatgatat ccatggccca
     1381 ccgtcagaat taccaaggca aaggactgct gaagaagtga tcaagagagc aaattctaga
     1441 gttaacacaa actgtacttc ggatgaaggt tttaatggag cacattctaa aaattttgca
     1501 atcgggggta gcagccatgg acaatatagg tttttgtag
//
LOCUS       XM_071830863             657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative syntaxin-24
            (LOC139840605), mRNA.
ACCESSION   XM_071830863
VERSION     XM_071830863.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..657
                     /gene="LOC139840605"
                     /note="putative syntaxin-24; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840605"
     CDS             1..657
                     /gene="LOC139840605"
                     /codon_start=1
                     /product="putative syntaxin-24"
                     /protein_id="XP_071686964.1"
                     /db_xref="GeneID:139840605"
                     /translation="MIPEGKIVYGHPVLQNITNSAQKPELSRIDDKKFRLWCFCAILL
                     LIFIISVAVILSLNIPKVDVDDVTLTRFMLSPINNTLYYYLVVGKMTFINPYSFVGLQ
                     FDKIDADLMYQGQQLGTKEITPDDDDDVVFYLPPHTKKSIENVVLRGERVLQLIHGDE
                     KLVYESQSKIGVYKIGVKVRIVVSSFAMWLFTEQDTYEISRKNLEVPLSSAAQISSAI
                     "
ORIGIN      
        1 atgataccgg aaggaaaaat tgtgtacggt catcctgtcc tgcaaaacat tactaactcc
       61 gcccaaaaac ccgagttgtc tcgcattgat gataaaaaat ttagactttg gtgtttttgc
      121 gcaattttat tacttatatt cattattagc gtcgcagtta ttttgagtct taacatccca
      181 aaagttgatg tcgatgatgt cactcttact cgattcatgt tgtcgcctat aaacaacacg
      241 ttatactact accttgttgt gggtaagatg acctttataa acccttacag ctttgtgggt
      301 ttacaatttg ataaaattga tgccgacttg atgtatcaag gccagcaatt ggggacgaaa
      361 gagattacgc ccgacgatga tgacgacgtc gtgttttatt taccgccaca tacgaagaaa
      421 agtattgaga atgtggtatt aagaggtgaa cgtgtattgc aattgattca cggtgatgag
      481 aagttggttt atgaatcgca aagtaagatt ggtgtttata agattggagt gaaggtgaga
      541 attgtggtgt cgtctttcgc catgtggttg ttcacggagc aagatacata cgagattagc
      601 cgtaaaaatt tagaggttcc attgagttct gcagctcaga tttcatctgc gatttga
//
LOCUS       XM_071830864            1110 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent protein
            kinase 29-like (LOC139840607), mRNA.
ACCESSION   XM_071830864
VERSION     XM_071830864.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139840607"
                     /note="calcium-dependent protein kinase 29-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840607"
     CDS             1..1110
                     /gene="LOC139840607"
                     /codon_start=1
                     /product="calcium-dependent protein kinase 29-like"
                     /protein_id="XP_071686965.1"
                     /db_xref="GeneID:139840607"
                     /translation="MKANQYCFKHNCRNARSVIFLVLSFSNTCNQCTLGKIYKEIVGS
                     AYYVAPEVLRRRYGKEIDVWSAGIIMYILLSNVPPFWGETKMVIFEEILDGKLDLQSP
                     PWPSISPGAKDLISKMLMRNPKDLITADKALEHPWLKEDGEASELPMDSAVLIRMKQF
                     RAMNKLKKLALKVIAENLESTEEIKGLKQMFNNMDTDKSGSITYEELKTGLSKLGSRL
                     AEPEIQQLMDAVDVDKNGTIDYIEFITATMHRHKLDREENLCRAFQFFDKDNNGFITR
                     DELKHSMTQYGMGDEATIDEVLDDVDTDKDGKINYEEFVTMMRKGTVETVPKRHHLVS
                     CGWFSVFTRRKIPGMLIGWILVLTLMILGSCNQKN"
     misc_feature    <115..411
                     /gene="LOC139840607"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    520..954
                     /gene="LOC139840607"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
ORIGIN      
        1 atgaaggcaa accaatattg tttcaaacat aactgccgca acgcgcggtc cgttatattt
       61 ctagtattaa gtttctcaaa tacgtgcaat caatgcacat tgggcaaaat ttacaaggaa
      121 atagtaggaa gtgcatacta tgtggcacca gaggtgttac gacgtcgtta tgggaaggag
      181 atagatgtgt ggagtgccgg tatcattatg tacattcttc ttagcaacgt ccctcctttt
      241 tggggagaga ccaaaatggt catatttgaa gaaattttag atggtaaact cgaccttcaa
      301 agccctccat ggccatcgat atcccctggt gctaaagatt tgatctctaa gatgttgatg
      361 agaaatccta aggaccttat cactgcagac aaagccctcg aacacccatg gctcaaagaa
      421 gacggtgaag catcagaact gcctatggat agtgcggttt tgatccgaat gaagcaattc
      481 agagcaatga acaagttaaa aaagctcgcg ttgaaggtta ttgcagaaaa cttagaatca
      541 actgaagaga taaagggctt gaaacaaatg ttcaacaaca tggacacgga taaaagtggt
      601 tcgataacat acgaagaact taaaacggga ctatcaaaac ttggatcaag gcttgctgag
      661 ccagaaatac aacagctcat ggacgccgtt gatgttgaca aaaatggaac aatcgactac
      721 atcgagttca tcactgcaac aatgcatcga cacaaacttg atagggaaga aaatttgtgc
      781 agagccttcc aatttttcga caaagataac aacgggttta tcactagaga tgaactgaaa
      841 cattctatga ctcaatacgg aatgggagat gaagcaacca ttgatgaagt gcttgatgat
      901 gtagatactg ataaggatgg gaaaatcaat tatgaagagt ttgtaacaat gatgaggaag
      961 ggaacagttg aaacagttcc aaaacgacac cacctggtgt catgcggatg gttttcggtt
     1021 ttcactcgaa ggaaaattcc agggatgttg attggttgga ttctggtttt aacattgatg
     1081 attttgggta gttgtaacca gaaaaactga
//
LOCUS       XM_071830865             597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840608), mRNA.
ACCESSION   XM_071830865
VERSION     XM_071830865.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..597
                     /gene="LOC139840608"
                     /note="uncharacterized LOC139840608; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840608"
     CDS             1..597
                     /gene="LOC139840608"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686966.1"
                     /db_xref="GeneID:139840608"
                     /translation="MEDTYKMLEFLDDDSDDEKIVSFINSITEEEVDGETKQFAIPSK
                     PGSNNDINVLNASPIFNSIKDGTAPPSPFDVNWRHYERGYYLGDGIYPDWAMLGRFAM
                     LKTPARYKDFNKIRRAMYACIVLHNMIQENNGFAIGRREERMIERNPPRRLQRDLRDR
                     DARVKEIRGKQVHQQLEADLTEHVWNLSPYFRSANNNE"
     misc_feature    <133..402
                     /gene="LOC139840608"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggaagata cttacaagat gctcgagttt cttgatgatg attccgatga tgaaaaaatt
       61 gttagtttta ttaatagtat aacggaagaa gaagtcgatg gagaaacaaa gcagttcgcg
      121 attccctcga agccgggttc gaacaatgat atcaacgttc taaatgcatc accaattttc
      181 aactctataa aagatggaac ggctccacct tcaccatttg atgtcaactg gcgtcactac
      241 gaaagagggt attacctagg cgatggtata tacccagatt gggccatgtt gggtagattt
      301 gcaatgttaa agactccggc gagatataaa gacttcaaca aaattagaag agctatgtat
      361 gcttgtattg tattacataa catgattcaa gaaaataacg gttttgctat tggaaggaga
      421 gaagaaagaa tgatagaaag gaacccacca cgaaggttgc aacgggattt gagggatcga
      481 gatgcaaggg ttaaggaaat aagaggcaag caagttcacc aacagttaga ggcagattta
      541 accgagcacg tttggaactt atcaccttac tttcggtccg ctaacaataa tgagtaa
//
LOCUS       XM_071830866             765 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840611), mRNA.
ACCESSION   XM_071830866
VERSION     XM_071830866.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..765
                     /gene="LOC139840611"
                     /note="uncharacterized LOC139840611; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840611"
     CDS             1..765
                     /gene="LOC139840611"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686967.1"
                     /db_xref="GeneID:139840611"
                     /translation="MFNTNPSDAPVVIEARIANCVVRGIYTNTGAGVDIMYEHCFVQL
                     PEKVKERLKDTFVPLASFSNDPSWSEGSIVLEVVLGKTTFKRTAHIEFLVVKANSQCN
                     VILGRSAMMTFEAVTSTVHGMMKFPTPAGITTLYAERRRTIECVQINRIAGTPIIHED
                     GSVSPNPEFPDQKIINENTIAKATKEKLYKILATNLDVFAWQDSDMTGVPRHIAEYKL
                     GVNLNIPPVCQKKRGMAPDRTKFLRDEVKKLVEAEY"
ORIGIN      
        1 atgtttaata ccaatccatc tgatgctcct gtagtgattg aagctcgaat agcaaattgt
       61 gttgttagag gaatatatac taatactgga gcaggagtag atatcatgta tgagcattgt
      121 tttgtacaac taccggaaaa agttaaggaa aggttaaagg acacatttgt tcccttagca
      181 agtttttcta atgatccgtc atggtcagag ggaagcatag tcttagaagt agtattggga
      241 aaaacaacat ttaaaagaac tgctcatatc gagtttttgg ttgtaaaagc aaattcacag
      301 tgtaatgtca ttttaggacg atcagctatg atgacatttg aagctgtgac gtcaacggta
      361 cacggaatga tgaaatttcc cacaccggct ggcatcacca cactatacgc tgaacggaga
      421 agaacaatag aatgtgtaca aataaacaga atagctggta ctccaattat tcatgaagat
      481 gggtcagtat caccaaatcc agagtttcca gatcagaaaa tcataaatga aaacacaata
      541 gcaaaagcaa caaaagaaaa gctttataaa attttagcaa ccaatttaga cgttttcgcg
      601 tggcaagatt ctgatatgac tggcgtacca cgtcatatag ctgaatataa gcttggtgtg
      661 aatctaaata tcccaccagt atgtcaaaag aaaagaggta tggctcccga tcgaacaaaa
      721 tttctcagag acgaagtcaa aaaactagtg gaggctgaat attaa
//
LOCUS       XM_071830867            1439 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840612), mRNA.
ACCESSION   XM_071830867
VERSION     XM_071830867.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1439
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1439
                     /gene="LOC139840612"
                     /note="uncharacterized LOC139840612; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840612"
     CDS             129..1439
                     /gene="LOC139840612"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686968.1"
                     /db_xref="GeneID:139840612"
                     /translation="MDEKITIISSGLGHLFMTVFVFNFANFMVVPAITDVSMAALCPG
                     EDECSLAIYLTGVQQAVTGMGSLVMMPLIGSLSDKYGRKVMLTLPMLLTTLPLVILAY
                     SRERNYFFAYYVLKTFTSMICEGSVLFLAHAYVADNVTLSTRASKFGILSGISSCSFV
                     FGNLSTRFLPSAASVFQVAAVVAMVSVVYMRIFLPESSMEAAVISVSLKEESMNESLL
                     EKGSKTNRQLLRSTPSLHDSIALLRSSWTFSQAAIVAFFSSLGELGLYSALLYYLKAE
                     FHFDKDQFADLMIINGIAGIISQMVLMPLLARVITEEKILAIGLIFNCVHIFLYSVAW
                     SSWVIYFAAMFQVLAVFAGPSLRSIVSKQVGPTEQGKAQGCITGLCSFASIISPLIFS
                     PLTALFLSDNAPFEFPGFSLVCAAFAVVRALTSSQFTNKIMLHL"
     misc_feature    171..1412
                     /gene="LOC139840612"
                     /note="Eukaryotic Solute carrier 46 (SLC46) family,
                     Bacterial Tetracycline resistance proteins, and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; Region: MFS_SLC46_TetA_like; cd17330"
                     /db_xref="CDD:340888"
     misc_feature    order(192..197,204..209,216..218,336..338,495..500,
                     504..512,525..527,582..584,591..596,603..605,891..893,
                     900..905,912..920,927..929,1011..1013,1023..1025,
                     1173..1178,1185..1187,1197..1199,1245..1247,1254..1259,
                     1266..1271,1278..1280)
                     /gene="LOC139840612"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340888"
ORIGIN      
        1 agtgacatct ctttttggtt tgcatatata atcatatata taaagaaggt ggtgtaggct
       61 tctaaattaa gcattgcttc ttctttttta tcaacattat tttcaccacc atcatcataa
      121 tttacatcat ggatgagaag atcaccatca tatcctcagg gttgggccac ctttttatga
      181 ctgtgtttgt atttaatttt gcaaatttca tggtggttcc ggccataact gacgtcagca
      241 tggccgcact ttgtcccggt gaagatgaat gttccttggc tatttatctc accggagttc
      301 aacaagcggt aacagggatg gggagcttag tgatgatgcc tctcatcgga agtctttcag
      361 acaaatatgg gaggaaggtc atgctcactc tcccgatgct tcttactact ttacctttgg
      421 taatattggc atacagcagg gagaggaatt acttctttgc atactatgtg ctcaaaacct
      481 tcacctccat gatttgtgaa ggaagtgtgc ttttccttgc acatgcttat gtggcggata
      541 acgtgacatt gtcaacacgt gcatccaagt ttggaatcct ttcgggcatc tcatcatgtt
      601 catttgtctt tggtaatcta tccactcgct ttctcccctc agctgcttct gttttccagg
      661 tagctgcagt agtggctatg gtttctgtag tttacatgag aatcttcctg cctgaatcaa
      721 gtatggaggc agcggttatt tctgtttcat tgaaagaaga atcaatgaat gaatcacttc
      781 tcgaaaaagg tagtaaaaca aaccgccagc tgttgcgttc aactccttcg ttgcatgatt
      841 caattgcatt gttgaggagc agctggactt tttcgcaagc agctattgtg gcatttttca
      901 gcagtctggg cgaattaggc ctttattctg cattattgta ttatttgaag gctgaatttc
      961 attttgataa agaccaattt gctgacttga tgatcatcaa cggtatagca gggatcatat
     1021 ctcaaatggt tcttatgccc ctattggcta gagtaatcac cgaagaaaaa attctggcaa
     1081 tcggcctcat ttttaactgt gttcatattt ttctttacag cgttgcttgg tcatcctggg
     1141 ttatctattt tgcagccatg tttcaggttc tagctgtttt tgctggacca agtttacgga
     1201 gcattgtatc caaacaagtt ggtccaactg agcagggaaa ggctcaaggg tgtattacag
     1261 gcctatgttc ctttgccagt attatatctc cactaatttt tagtcctcta acagctttgt
     1321 tcttgtctga caacgcacca tttgagtttc ctggttttag tcttgtgtgt gctgcatttg
     1381 cagtggtaag agctttgaca tcatcacaat ttactaacaa aataatgctt catctctaa
//
LOCUS       XM_071830869             564 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL10z-like (LOC139840613), mRNA.
ACCESSION   XM_071830869
VERSION     XM_071830869.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..564
                     /gene="LOC139840613"
                     /note="large ribosomal subunit protein uL10z-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840613"
     CDS             1..564
                     /gene="LOC139840613"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL10z-like"
                     /protein_id="XP_071686970.1"
                     /db_xref="GeneID:139840613"
                     /translation="MASKAVRKVVHHQKLLNHLKNNTHILLITADNLNANQVKAVKEG
                     LHKEASFLMGNNAWLKRSIAIHAPATGNNAFAGLVPYISGKVGLVFTKSDPEQVSEFV
                     SSSIKLRPLLCSSMDIGMGSIWQWLMVTHFDLVDNAIITLLAIVRIQENTSFLSGGKM
                     GGWITGQKRLYLYNDEGKSDLGAPMDE"
     misc_feature    7..>312
                     /gene="LOC139840613"
                     /note="Ribosomal protein L10 family; composed of the large
                     subunit ribosomal protein called L10 in bacteria, P0 in
                     eukaryotes, and L10e in archaea, as well as
                     uncharacterized P0-like eukaryotic proteins. In all three
                     kingdoms, L10 forms a tight complex with...; Region:
                     Ribosomal_L10_P0; cl00376"
                     /db_xref="CDD:469747"
ORIGIN      
        1 atggcttcca aggcagtaag aaaggtagtt caccaccaaa aattactcaa ccacctcaaa
       61 aacaacactc atattctctt aattactgct gacaacctta atgcaaatca agtcaaagcc
      121 gtaaaggaag gtttacacaa agaagcttcg tttctaatgg gaaataacgc atggttaaaa
      181 cgctcaatcg ccattcatgc accggctacc ggaaacaacg ctttcgccgg attggttccg
      241 tacatttccg gtaaagttgg gttggtattc actaaaagtg atcctgaaca agtgagtgaa
      301 tttgttagtt caagtattaa actgcggccg cttttgtgtt cttctatgga tattggaatg
      361 ggttcgatct ggcagtggtt gatggttact cattttgatc tggttgataa cgcaattata
      421 actctattgg cgattgtgcg aatccaagaa aacacaagtt ttttgtcagg tggcaaaatg
      481 ggcggctgga taactggtca aaaacgatta tacctttata atgatgaggg aaaaagtgat
      541 ttaggagctc ctatggatga ataa
//
LOCUS       XM_071830870             483 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840614), mRNA.
ACCESSION   XM_071830870
VERSION     XM_071830870.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..483
                     /gene="LOC139840614"
                     /note="uncharacterized LOC139840614; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840614"
     CDS             1..483
                     /gene="LOC139840614"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686971.1"
                     /db_xref="GeneID:139840614"
                     /translation="MDTEIETVDTSTHVNEWAREPRGITAAELQQLQELLGTFSFVNG
                     DSDKWKWHMHNNGLLSTIVFTCQLNEKLPSSNAYALPTARNKFLPQKVGIFIWRTKLK
                     RLPVREELDKKCIDLDTLLCPVCSSKIEYVEHTLLTCPFAIDDWSQVRRWWGINSCSG
                     "
     misc_feature    <253..426
                     /gene="LOC139840614"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggacaccg aaattgagac tgtggatacc tccacccatg tcaatgaatg ggctcgtgaa
       61 ccaagaggca taacagctgc tgaattacaa caacttcagg agctgctcgg aacattttcc
      121 tttgtgaatg gagactctga taaatggaaa tggcacatgc acaacaatgg tctcctttcg
      181 acaattgtct tcacgtgtca acttaatgaa aagctgccga gttcaaatgc ttatgcactc
      241 ccaacagccc gcaacaagtt tctaccacaa aaggtgggta tttttatttg gagaacaaaa
      301 ctgaaaagac taccggttcg tgaagagcta gacaagaaat gcattgatct tgacacactc
      361 ctttgccctg tatgcagctc gaaaattgaa tatgttgaac atactttgtt aacttgcccg
      421 tttgccatag acgattggtc acaggttcgt cgttggtggg gtatcaatag ctgttccggg
      481 tag
//
LOCUS       XM_071830871             492 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139840615), mRNA.
ACCESSION   XM_071830871
VERSION     XM_071830871.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..492
                     /gene="LOC139840615"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840615"
     CDS             1..492
                     /gene="LOC139840615"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071686972.1"
                     /db_xref="GeneID:139840615"
                     /translation="MLEALTSYDGWFWHTYFGPAGLNNDINVLNQSDLFTELLAGEAP
                     PCTYTVNGCTFNKGYYLEDGIYPEWATLVNSFRNPIDPKQSKFSKYQASARKDIERAF
                     RVLQGRWTIVQHPARPYYIRKIRRIMFTCIILNNMIIEDNDRAYCGLEENYRPIRRAR
                     GTF"
     misc_feature    <4..423
                     /gene="LOC139840615"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcttgaag cgctaacatc gtacgatgga tggttttggc acacttattt tggacctgcg
       61 ggtttaaata atgatatcaa cgtacttaat caatctgatt tgtttactga gttattagcc
      121 ggtgaagctc caccatgtac gtatacggtt aacgggtgta cgtttaataa gggttattat
      181 ttagaggatg gaatttatcc ggaatgggca acattagtga attcgttcag aaatccgata
      241 gacccgaaac aatcaaaatt ctcaaagtac caagcatcgg caagaaaaga tattgaacga
      301 gcatttagag tactacaagg tcgatggacc attgttcaac atccggcaag accgtattac
      361 atccgcaaaa ttagaaggat tatgttcaca tgtatcatat taaataatat gataatcgag
      421 gacaacgatc gtgcatattg tgggctcgag gagaattatc gtccgattcg acgtgcacga
      481 ggaacattct aa
//
LOCUS       XM_071830872             549 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840616), mRNA.
ACCESSION   XM_071830872
VERSION     XM_071830872.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..549
                     /gene="LOC139840616"
                     /note="uncharacterized LOC139840616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840616"
     CDS             1..549
                     /gene="LOC139840616"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686973.1"
                     /db_xref="GeneID:139840616"
                     /translation="MAKWAIELGEHDIEFRVRHAIKGQVLADLIAKTDSVNEEDTKNS
                     TQVITPKIENEEWKLYTDGASSSDGSGDGLMLVNPEGKEFTYALRFEFDTTNNEAEYE
                     ALLAGLRMAKELKILHLRAFVDSQLLCNQIKGTFEEKQPTIQQYLSKAKELIESFKSF
                     DIEHVRRSQNKKADALSILASK"
     misc_feature    169..546
                     /gene="LOC139840616"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(184..195,283..291,298..300,370..372,490..492,
                     532..534)
                     /gene="LOC139840616"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggccaaat gggccattga gttaggagaa catgacattg agttccgagt caggcatgca
       61 atcaaaggac aagttctagc agatttaatc gccaaaacag atagtgtaaa tgaagaagac
      121 acaaagaact caacccaagt catcacccca aagatcgaaa atgaagagtg gaagttgtac
      181 accgacggtg catcaagttc cgatggatca ggtgatggtc taatgttagt aaatcccgaa
      241 ggaaaagagt tcacttatgc actccgtttc gaatttgaca caaccaacaa cgaagcagag
      301 tacgaagctc tactagcagg gttgagaatg gcgaaggaat tgaaaatcct tcatctccga
      361 gccttcgttg actcacagct attgtgcaac cagatcaagg gcacctttga agaaaagcaa
      421 cccaccatcc aacagtactt gtcaaaagca aaagaactga tcgaaagctt caagagtttc
      481 gacatagagc atgttcgaag aagtcaaaat aagaaggcag acgcactgag catactcgct
      541 tcgaaataa
//
LOCUS       XM_071830873             866 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840618), mRNA.
ACCESSION   XM_071830873
VERSION     XM_071830873.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..866
                     /gene="LOC139840618"
                     /note="uncharacterized LOC139840618; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840618"
     CDS             87..638
                     /gene="LOC139840618"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686974.1"
                     /db_xref="GeneID:139840618"
                     /translation="MSSLNSGRILCNASTITPYTLSPLHRPSLSLIPTRTKTSLHIVS
                     AAAKKQVRTGKFDSKNKKGSIKEDDNNDSSVGTVVVADDVENFDGYVLPDLPGLEKDF
                     WEGPEWDGFGFFVEYLWAFGIVFALLSSGIAVATYNEGATDFKETPAYKESIQSRDLL
                     EEPEASSPDIFESNPTEEAPSLE"
     polyA_site      866
                     /gene="LOC139840618"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgggtcaaa aatccgggtt cacttcctta tcccctcact ccaacccgat aacagaacag
       61 attccctccc tcctccaatt acaccaatgt cgtctctcaa tagtggccgg attctatgca
      121 acgcttccac cataacaccg tataccctct cccctcttca ccgtccatct ctatcgctta
      181 ttcccacacg aacaaagaca agtcttcata tagtttcagc agcagctaaa aaacaagtta
      241 gaactggaaa atttgacagc aagaacaaaa aggggtccat aaaagaagat gataataatg
      301 atagttcagt tgggacagta gtagttgctg atgacgtgga gaattttgat gggtatgtgt
      361 tgccagatct tcctgggctt gaaaaagatt tttgggaagg acctgaatgg gatggttttg
      421 ggttctttgt tgagtatttg tgggctttcg gtatcgtttt cgcgttatta tctagtggaa
      481 ttgctgtggc gacatacaac gaaggcgcaa cggattttaa ggaaactccg gcttacaagg
      541 aatcaattca atcaagggac ttgttagaag aacccgaggc atcaagtccc gatatttttg
      601 agtctaatcc taccgaagag gctcctagtt tggaataact agttcccgaa tcaccaattt
      661 tttgcacaaa ttttgcaaag aatagaagat tgttgtataa ggtaatgtaa tttgatgcac
      721 aacaaataaa actttcttct ttaatgtata atcaagaatc aagatagttg aaattgcagg
      781 ttttagtttt caacaatgta gaacagatga atttcatgtt attttagtac atactatata
      841 agctaaagtc aacaaatatt gatctc
//
LOCUS       XM_071830874            1695 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840619), mRNA.
ACCESSION   XM_071830874
VERSION     XM_071830874.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1695
                     /gene="LOC139840619"
                     /note="uncharacterized LOC139840619; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840619"
     CDS             1..1695
                     /gene="LOC139840619"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686975.1"
                     /db_xref="GeneID:139840619"
                     /translation="MTTTWIYPHNPGRICYTQDHQVPPPNVANSNFWINQKTPFVPYI
                     QNCAFPDGMKIPSHLIYYEGKDDPDDFLSIFEGAARMAKWDIPVACHAFSYMLKGDAR
                     VWFDSLPKDSVASFDDLKRQFRSKFSQQKRHRKNHVAAHGIKQKDSEGSRAFLARYTN
                     ETHQIPNLPETQRISGLLYGSRVRPLIEHLSRDLPSTYEALLENAYVWLDAKETAGNF
                     VLDDTPMNKRKEKSERREDRHGRKDDRGRFHPYRREIGAGILGALIKTPKEILATEKA
                     ANKFKAPEKMSNRARNRDMTKFCDFHNDFGHDTDECFNLKTAIEEAVKSGKLSHLIKE
                     IWEPKKERVQEKKMEDTRQEAENAILAIDSYQPYKKRERYRIAREWSKVSFPALDTIC
                     PSDLPVTINGKIFNREVRRIYLDSGSACEHCFERLSPAIRARLGAPRMPLVGFSGERC
                     WPIGEIDLDFTIGEPPLARTETIDFVVVRANSPHSILLGRVAMKKMGIIVSTVHQMVK
                     FHTHEGIGILASTYDRNKVILAIKETMKEPTECILEASKEDPQVEKISVNPMFQDQ"
     misc_feature    277..513
                     /gene="LOC139840619"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atgaccacca cctggatata tcctcataat ccagggagaa tatgctacac ccaagatcac
       61 caagtaccac ccccaaacgt agctaacagc aacttctgga taaaccaaaa aactccgttc
      121 gtgccctaca tccaaaactg tgcattcccc gatggaatga aaataccttc gcatctaatt
      181 tactacgagg gaaaagacga cccggatgat ttccttagta tattcgaggg ggcagcacga
      241 atggccaaat gggacatacc cgtagcatgt catgcattct cttacatgtt aaaaggagat
      301 gctagggttt ggtttgattc cctaccaaaa gactctgtag ctagcttcga cgacctaaaa
      361 cgacaattta ggtctaagtt tagtcagcaa aaacggcaca ggaagaatca tgtggccgct
      421 catgggataa agcaaaagga tagcgaaggt tctagagcct ttctcgctag gtacaccaac
      481 gaaacacatc aaattcccaa cctaccagaa acccaaagaa tttctgggtt actctacgga
      541 tctagggtca ggcctctcat tgaacacctt agccgagacc taccgagcac ttacgaagct
      601 ttgttagaaa atgcatatgt atggttagat gctaaggaaa cagccggtaa cttcgtccta
      661 gatgacactc ccatgaataa gcgaaaggag aagtcggaaa gaagggaaga tagacatggt
      721 aggaaagacg atagagggag attccaccct tatcgaagag aaatcggagc tgggatcttg
      781 ggggcattga taaaaactcc caaggaaatc ctagcaacag agaaagctgc caacaagttc
      841 aaagccccgg aaaaaatgtc caacagagca agaaataggg acatgaccaa gttttgtgac
      901 ttccacaacg attttgggca cgatacggat gaatgtttca acctcaaaac agccattgag
      961 gaagctgtaa agtctggcaa actatcccat ctcataaagg aaatttggga accaaagaaa
     1021 gagagggtac aggaaaagaa gatggaggat acgaggcaag aagcagaaaa tgcaatccta
     1081 gccatagatt cataccagcc ttacaagaaa agagaaagat accgtatcgc cagagaatgg
     1141 agcaaagtgt cattcccagc tctcgatacc atatgtcctt cggacctacc ggtcaccata
     1201 aatggaaaga tttttaacag agaggtacga aggatatacc tcgacagtgg aagtgcttgc
     1261 gaacattgct tcgaaaggtt aagtcccgct atcagagcgc ggttaggtgc cccaagaatg
     1321 cccttagttg gattctccgg agaaaggtgt tggcccatcg gagaaattga tctcgacttc
     1381 acaatagggg aaccaccact agcaagaaca gaaaccattg atttcgtggt agtccgagca
     1441 aactccccac acagcatcct gctcgggagg gtagctatga aaaagatggg cataatcgta
     1501 tccacggttc atcaaatggt caaattccat acccacgagg gaatcggcat cctcgcatca
     1561 acatacgaca ggaacaaggt aatcttagcc ataaaagaaa caatgaaaga accaaccgaa
     1621 tgtatcctag aagcttcgaa ggaggatccc caagtagaaa agatatcagt aaacccgatg
     1681 tttcaggatc aatag
//
LOCUS       XM_071830876            1020 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mitochondrial inner membrane
            protein OXA1-like (LOC139840620), mRNA.
ACCESSION   XM_071830876
VERSION     XM_071830876.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 65% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1020
                     /gene="LOC139840620"
                     /note="mitochondrial inner membrane protein OXA1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139840620"
     CDS             1..1020
                     /gene="LOC139840620"
                     /codon_start=1
                     /product="mitochondrial inner membrane protein OXA1-like"
                     /protein_id="XP_071686977.1"
                     /db_xref="GeneID:139840620"
                     /translation="MACMRSLTTRAKPFSQQLRSIVPSISSINHDDSKFLLHSDEKFS
                     YFFQCRSYGVYSNINHNNTMLGLGFGVNFRDPKRSAYRCCDVPMTSVSGFLLARKMYS
                     TNGSDHTGDNSFIEISKIMSETPTDSMFVDETVEFVSNQAPAISEVVAAAADSFLPVA
                     AMQYAFYGVHIFTGFNWWASIAITTLIIKTLLLPLSIKQRRATIHRQIKRRKIEETKK
                     ELQDQGKSPTEVEEILKRQYGTYRIWFLIFHTCYLQIMNMVDKVPSFTTGGLSWFLDL
                     TTRDTFFILPCLNAYSLWMLLKCTPPPARLSASKFASEDMATIYGTKETSATVNEVME
                     SEQQQ"
     misc_feature    520..>882
                     /gene="LOC139840620"
                     /note="Five transmembrane core domain of YidC/Oxa1/Alb3
                     protein family of insertases; Region: 5TM_YidC_Oxa1_Alb3;
                     cl40441"
                     /db_xref="CDD:424072"
ORIGIN      
        1 atggcatgca tgcgtagtct caccacaagg gcaaaacctt ttagtcaaca acttcgatca
       61 attgttcctt caatttcatc tatcaatcac gacgatagta aatttctact acattcagat
      121 gagaaattta gttatttttt ccaatgccgt tcgtacggcg tttacagtaa cattaaccat
      181 aacaacacta tgttagggtt agggtttggt gtgaactttc gggacccgaa acgatctgcg
      241 tatcgttgtt gtgacgtacc gatgacatca gtgagtggat ttctgttagc tagaaaaatg
      301 tattctacta atggatcaga tcatacaggc gataattcgt ttattgaaat tagtaaaatt
      361 atgagtgaga caccaactga tagcatgttt gttgatgaaa ctgtggagtt tgtgtctaat
      421 caagcccctg ctattagtga agttgtagct gctgctgcag attcctttct accagttgca
      481 gctatgcaat atgcttttta tggggttcac attttcactg gctttaattg gtgggcaagc
      541 atagcaatta caactctcat tattaaaacg ttgttacttc cactctctat taagcaacgc
      601 agggctacca tacacagaca aattaagagg cgaaaaatcg aagagactaa aaaagagttg
      661 caagatcagg gcaagagtcc cacagaagtt gaggaaatat tgaaaaggca atacggaact
      721 taccgtatct ggtttttaat ctttcacaca tgttatttgc agattatgaa catggtggac
      781 aaggttccat cttttacaac gggcgggttg agttggttcc tcgatcttac aacacgcgat
      841 actttcttta ttctaccttg tttgaatgca tattcactgt ggatgctttt aaagtgtacc
      901 ccacctccgg cccgtttatc agcttcaaag tttgcttcgg aagatatggc tacaatatat
      961 ggaacgaagg aaacttcagc tacagtgaat gaggtcatgg aatcagagca acaacagtga
//
LOCUS       XM_071830877            1568 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alkane hydroxylase MAH1-like
            (LOC139840621), mRNA.
ACCESSION   XM_071830877
VERSION     XM_071830877.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1568
                     /gene="LOC139840621"
                     /note="alkane hydroxylase MAH1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840621"
     CDS             1..1563
                     /gene="LOC139840621"
                     /codon_start=1
                     /product="alkane hydroxylase MAH1-like"
                     /protein_id="XP_071686978.1"
                     /db_xref="GeneID:139840621"
                     /translation="MALFEHTAIFSLLLILMTFLMFIINMNQNRRSVILINWPIIGMV
                     PGLVLNTHRIHDYMTEILTQTDGTFMFKGPWFANMDMLITTNPLDVRHVLFKNFNNYP
                     KGDKFRNIFDIFGDGILTSEGPLWDIQRKITTCLFKHANYQSLLETVIWDKLENGLLP
                     ILESISNNAKEIDLQELFDRFTFDNTCKLLLDHDPESLSLDLPYVSCQKAPHDVGETI
                     FHRHYTPQIIWKLKQLLRWSDEKNFKDAWKTLDDFIYKCLIQKQNDCNKTNDEEHEEG
                     KTSLLTTFMIDIKDQCGDFGEPTKILRDMILSLMLAGKDTISSALSWFFYLLAKNPIV
                     EEKILEEICIHLEVNVGERWSAKDGGEMVYLNGALNESLRLFPPIPLNHKSPLQPEIL
                     PSGHKVDRNMQIFLCFYSMGRMKSIWGEDCMEFKPERWISSTGRIKHEPSYKFTTFNA
                     GPRSCLGKDMSLSQMKIVTSTIIYRYHIELVEGSCLVPADSIVLKMKHGLKVRLTKRS
                     QLRGQLNVQRTI"
     misc_feature    205..1500
                     /gene="LOC139840621"
                     /note="cytochrome P450 family 86, subfamily A; Region:
                     CYP86A; cd11064"
                     /db_xref="CDD:410687"
     misc_feature    order(376..378,388..390,409..411,556..558,922..927,
                     934..939,946..951,958..960,1117..1119,1144..1146,
                     1150..1152,1222..1224,1339..1347,1357..1371,1378..1383)
                     /gene="LOC139840621"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410687"
     misc_feature    order(640..645,922..924,931..936,946..948,1138..1149)
                     /gene="LOC139840621"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410687"
ORIGIN      
        1 atggctttgt ttgaacacac tgccattttc tctttacttc tcattttaat gacattttta
       61 atgtttatca taaacatgaa tcaaaacaga cgatcagtta tccttatcaa ctggccaatt
      121 attggtatgg tgccgggact tgttttaaac acccaccgaa tacatgatta catgactgag
      181 attctcacac agacagacgg tacattcatg tttaaaggcc cgtggttcgc caacatggac
      241 atgctcataa ctactaatcc tttagacgtc cgacacgttc tcttcaaaaa cttcaacaac
      301 tacccgaaag gtgataagtt tcgtaacatc ttcgatatct ttggagacgg catccttact
      361 tctgaaggtc cgctatggga tattcagcgc aaaatcacca catgcttgtt taaacatgct
      421 aactatcaaa gtttactaga aacagttata tgggacaagt tggagaatgg gcttctacct
      481 atacttgaat ccatttctaa taacgcaaag gagatcgatt tacaggaact gtttgatcgg
      541 ttcactttcg acaatacatg taaactactt ttggatcatg accccgaaag cttgtcacta
      601 gatctacctt acgtctcatg tcaaaaggca ccgcacgatg ttggagaaac gatatttcat
      661 aggcattata cgcctcagat catatggaaa ttaaaacagt tacttagatg gagcgatgag
      721 aagaacttta aagacgcgtg gaaaacactt gatgatttca tatacaaatg cttaattcaa
      781 aaacaaaacg attgcaataa gacaaacgat gaagaacacg aagaaggaaa aacatcgtta
      841 ctaaccactt tcatgataga tataaaagat cagtgtggcg attttggtga accgaccaaa
      901 attttaaggg atatgatatt aagtcttatg ctcgcaggta aagatacaat tagtagcgct
      961 ttatcttggt tcttttatct ccttgcgaag aacccaatcg tagaagaaaa gattcttgaa
     1021 gagatttgta ttcatcttga ggtgaacgta ggcgagagat ggagcgcaaa agacgggggt
     1081 gaaatggttt accttaacgg agcgttaaac gaatcgttaa ggcttttccc tcctattccg
     1141 ctaaaccaca aatctccgtt acaacccgag attcttccaa gtggccataa agttgatcga
     1201 aacatgcaaa tttttctatg tttttattca atgggaagga tgaaatcgat atggggtgaa
     1261 gactgtatgg agtttaagcc tgagaggtgg atttcgagta caggaagaat taaacatgaa
     1321 ccgtcataca aatttacgac gtttaatgct ggcccaagaa gctgtttggg taaggacatg
     1381 tctttatctc aaatgaagat agtcacatct acgatcattt atcgttatca cattgagctg
     1441 gtggagggta gttgtttggt ccccgcggat tctatcgtgc taaagatgaa gcatggtctt
     1501 aaggtcagat taactaaacg aagtcaactc cgaggtcaac tcaatgtaca acgaactatt
     1561 tgaagaag
//
LOCUS       XM_071830878             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840624), mRNA.
ACCESSION   XM_071830878
VERSION     XM_071830878.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139840624"
                     /note="uncharacterized LOC139840624; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840624"
     CDS             1..861
                     /gene="LOC139840624"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686979.1"
                     /db_xref="GeneID:139840624"
                     /translation="MVGKSGGQLIIWDEACFDVTNSFVYDFCIGIRGKWKHSDKEFNV
                     LNVYGPHDDINKQRLWNFLHNLIVNNSNQAWVIGGDFNEVRNASEGFNCNFIESRAKL
                     FNEFIEDSKLIDIPLGSDFHTERGKSDHCPITLKEDDRNFGPKPIKVFDDWLEIEGVE
                     DCIKDVWAEDVGGGSRLDCRLRNKLKKIKMALKSKSSEKFGNLEGEIELFRSMANTYE
                     LRAEFGQLNDDERTDWLNARKEWFQREKIKCNMLKQKAKIRWVLEGDENSKYFHSVIK
                     RGYNKCNIRV"
ORIGIN      
        1 atggtcggga agtccggggg acagttaata atatgggatg aagcttgttt tgatgtcact
       61 aattcttttg tttatgattt ttgtatcggt attcgtggta agtggaagca ttcggacaag
      121 gaattcaacg tgttaaatgt ctacggccca catgatgaca tcaacaagca aagattgtgg
      181 aattttcttc ataatttgat tgttaataat agtaatcagg cctgggtgat cggaggtgat
      241 tttaacgagg ttcgtaatgc tagtgaaggg ttcaactgca atttcattga atctagggca
      301 aagttgttta atgagttcat cgaggattct aagctgatcg atattccatt ggggtcggat
      361 tttcacacgg aaagggggaa atcagaccac tgcccgatca ctttaaaaga ggatgatcga
      421 aattttggcc cgaaaccgat taaggtgttt gatgattggc tcgaaattga aggagttgaa
      481 gattgcatta aagatgtttg ggccgaagat gttggaggtg gttctcgttt agattgtcgc
      541 ttaaggaaca agcttaaaaa aatcaaaatg gcattaaagt caaagagttc ggaaaaattt
      601 ggcaacctag agggtgagat agagctattt agatccatgg ccaatacgta tgagcttcgg
      661 gcagaattcg gtcaattaaa tgacgatgaa agaaccgatt ggttgaatgc tagaaaggaa
      721 tggtttcaaa gggagaaaat caaatgtaac atgttgaaac aaaaggcgaa gattcgttgg
      781 gttctcgagg gtgatgagaa ctctaagtat tttcactcgg taataaaaag aggttacaac
      841 aagtgtaaca ttagggttta a
//
LOCUS       XM_071830881             706 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides H/ACA ribonucleoprotein
            complex subunit 1-like protein 2 (LOC139840625), mRNA.
ACCESSION   XM_071830881
VERSION     XM_071830881.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..706
                     /gene="LOC139840625"
                     /note="H/ACA ribonucleoprotein complex subunit 1-like
                     protein 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139840625"
     CDS             50..649
                     /gene="LOC139840625"
                     /codon_start=1
                     /product="H/ACA ribonucleoprotein complex subunit 1-like
                     protein 2"
                     /protein_id="XP_071686982.1"
                     /db_xref="GeneID:139840625"
                     /translation="MRPPRGGGFDGRSGGGRSSGGRFGGGRSSGGRFGGRFGGNSYNE
                     GPPEIVLFLIVLSAFVHAAEGDAVTKLTNEKIPYFNAPIFLQNKTKIGKVDEIFGPIN
                     ESFFSVKMDEGIVATSYAAGDKFFIDPMKLLPLSRFLPQPKGASTGGRGRGAGRGTGF
                     RGRGAPRGGGFRGRGAPRGNFRGGGGGSRGGFSRGRGRS"
     misc_feature    206..466
                     /gene="LOC139840625"
                     /note="Gar1/Naf1 RNA binding region; Region: Gar1;
                     pfam04410"
                     /db_xref="CDD:461296"
ORIGIN      
        1 ctcacaaaac cctaattttt atttcctctt cctatcacgt ctcaacaaaa tgcgacctcc
       61 aagaggcggc ggtttcgacg gtcgtagcgg cggcggtcga agcagtggtg gccggttcgg
      121 cggcggacga agcagtggtg gccgatttgg cggtcgtttt ggtggcaaca gttacaacga
      181 aggtccaccg gaaatagtct tatttttaat tgtgctttcg gcatttgttc atgctgctga
      241 gggagatgca gtgaccaagc taactaatga gaaaatacct tactttaacg caccgatttt
      301 tctacaaaac aaaacaaaaa tagggaaagt tgatgaaatt tttggtccta ttaatgaatc
      361 tttcttctct gttaaaatgg atgaaggtat tgtagcgact tcgtatgcag ctggcgataa
      421 gtttttcatt gatccaatga aacttcttcc tctatccaga tttcttccac aaccaaaggg
      481 agcaagtact ggcggaagag gacggggtgc tggtcgtggc actggctttc ggggtagggg
      541 tgctccaaga ggcggtggct ttcgtggtag gggtgctcca agaggcaact ttcgtggtgg
      601 tggtggtggt agtcgtggtg ggttcagtag gggccgaggg aggtcataaa acatgattta
      661 cttgtatgtt ccatctagtt tacttatctc ttgtagtagt agtagt
//
LOCUS       XM_071830882             735 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840626), mRNA.
ACCESSION   XM_071830882
VERSION     XM_071830882.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..735
                     /gene="LOC139840626"
                     /note="uncharacterized LOC139840626; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840626"
     CDS             1..735
                     /gene="LOC139840626"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686983.1"
                     /db_xref="GeneID:139840626"
                     /translation="MVDSIILNVYGPHNDQLKHKFWDSLDNIMQVDIDDWVICGDFNE
                     VRRRTERKNCEFIESRAKMFNDFIDKANLIEIPLGGMKFTRISDDGLKYSKLDRFLVS
                     EACYASWDGISACTLDRDYSDHYPIILKDMNNDFGLKPIRIFNNWFEDEKSDDLIKDV
                     WKVTIHNPRADCIFRDKLKNVKGVLKEKCNPKYNSLNAEIDSLHKEISKWKNIIGTRD
                     LSEVEIASWLDLKKSGFKKIGRKAIY"
     misc_feature    <13..390
                     /gene="LOC139840626"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(28..30,127..129,370..372)
                     /gene="LOC139840626"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atggtggatt ctattatatt aaacgtttat gggccacata atgatcagtt gaaacataaa
       61 ttttgggata gtcttgacaa tattatgcag gtggatattg atgattgggt tatctgtggc
      121 gattttaatg aagtaaggcg aagaacggaa aggaaaaatt gcgaatttat cgaaagtaga
      181 gcaaagatgt tcaacgattt cattgacaag gctaatctta ttgaaattcc attaggggga
      241 atgaagttta ctaggattag tgacgacggt ttgaaatata gtaaacttga caggttctta
      301 gtctcggaag cgtgttatgc atcatgggat ggaatttctg catgtactct cgatagggat
      361 tactccgatc attaccccat cattttgaag gatatgaata acgacttcgg gctgaaacct
      421 attaggattt tcaacaattg gttcgaagat gaaaaaagtg atgatttgat aaaagatgta
      481 tggaaagtta ccattcataa tccaagggcc gattgtatat ttcgtgataa acttaagaac
      541 gtaaaagggg tgttgaagga aaaatgtaat cctaaatata atagtctaaa tgccgaaatc
      601 gactcacttc ataaagaaat ttctaaatgg aaaaacatca tcggtactcg tgacctttcg
      661 gaagttgaaa ttgcatcttg gttagacttg aaaaaaagtg gtttcaaaaa gatagggaga
      721 aaggcgatat attga
//
LOCUS       XM_071830883            1782 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840627), mRNA.
ACCESSION   XM_071830883
VERSION     XM_071830883.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1782
                     /gene="LOC139840627"
                     /note="uncharacterized LOC139840627; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840627"
     CDS             35..1675
                     /gene="LOC139840627"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686984.1"
                     /db_xref="GeneID:139840627"
                     /translation="MFKCDDHDDISQCSINGKISKHDHGGGVLDRRSYNFTPEIDKLT
                     KSLTHDLKLENILRDQSWSGSETEMTPFSASFSSNTSNGTPNSKSSLELVREIASLET
                     EILHLERYILSLYRTVFQPHVHSIQTFDSTIEHMLQLELQPVADQAYSKVNSDARLSD
                     YPAQLSPMHEETVNFSQQITPPIPKSSHIKDRKIAHFSHRSLGDHLDIPCTENAILDG
                     PDRLSEDIIRCISSIYCKLGDQNQSRSGPLVSSATSMSSSGTNFTRKVSDTWSPYCND
                     EATWDTKQKSLKEKTGPYAEMIEVLKISVDDDGFSYASRILKKFRALVKRLENVDPTK
                     MKREQKLAFWINIHNALVMHAYLAYGTQNSTKSNSLLKATYNIGGHSINAYVIQISIL
                     GIKSHFKAPSLLSIGRKLKTDASKHIYAIEYPEPLVHFALSLGAFSDPAVRIYNAKNI
                     FQDLRLAKEEFIQSTVYVNNEKRIYLPKILYYFAKDLALTMIGLLEIVNSCLSEHQQK
                     ALKACIKGKPEKYVYWLSQSCIFRYVIQLDKVEGRLSV"
     misc_feature    149..391
                     /gene="LOC139840627"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     Region: Lzipper-MIP1; pfam14389"
                     /db_xref="CDD:464163"
     misc_feature    1043..1420
                     /gene="LOC139840627"
                     /note="Protein of unknown function, DUF547; Region:
                     DUF547; pfam04784"
                     /db_xref="CDD:461427"
ORIGIN      
        1 gactgttgac ctaagaaaaa aaagaaacta gaagatgttc aagtgtgatg atcatgatga
       61 tatttctcaa tgcagcatta atgggaagat tagcaaacat gatcatggcg gtggtgtcct
      121 cgatagacgt tcctacaatt tcacaccaga gatagacaaa ttaacaaaat cattgacaca
      181 tgatttgaaa ttggagaata tattgcgtga tcaatcttgg agtgggtcag aaacagagat
      241 gactccattt tctgcttcat tttcttctaa cacttcaaat ggtacaccta attcaaagtc
      301 atctttggaa ttagtgagag agatcgcgtc tcttgaaacg gaaatacttc atttggaaag
      361 atatatactt tcactgtacc gaacagtttt tcagccacat gttcatagta tacaaacctt
      421 cgactccact atagagcaca tgttacaatt agaattacaa cctgttgctg atcaggcata
      481 ctctaaagtc aactctgatg cacggttaag tgattatcct gctcaacttt ctcctatgca
      541 cgaggaaact gtgaatttta gtcaacaaat tactcctcca ataccaaagt catcacatat
      601 aaaagatcga aaaattgctc attttagtca tcgtagtctc ggggatcacc ttgatattcc
      661 atgtacggag aatgctattc ttgacgggcc cgatagactc tctgaagaca taattcgatg
      721 tatttcttct atttactgca agcttgggga ccaaaatcag tcacgatctg gaccgttggt
      781 ttcatctgcc acatccatgt cctcatcggg tacaaatttt actagaaaag tttcagatac
      841 gtggagtcct tattgcaatg acgaagctac gtgggacact aaacagaaaa gtttaaaaga
      901 aaaaacaggg ccctatgcag agatgataga ggttttgaaa ataagtgtgg atgatgatgg
      961 attcagttat gcttcaagga tactaaaaaa attcagagca ctggtaaaga gacttgagaa
     1021 tgttgaccct acgaaaatga aacgagaaca aaagcttgcg ttttggatta acatccataa
     1081 tgctttggtg atgcatgcat atttagcata cgggacacaa aacagcacga aaagcaattc
     1141 acttttgaag gcaacttata acatcggggg acactccatc aatgcatatg tcatccaaat
     1201 ctctatacta ggaatcaaat cacactttaa agcaccgtca ctgttatcta tagggaggaa
     1261 gttaaaaaca gatgccagta aacatattta cgccattgaa tacccagagc cattggtcca
     1321 ttttgccctt tcgttagggg ccttctctga tcccgcggtt cgtatctaca atgcgaagaa
     1381 catttttcaa gatctgaggt tggctaaaga agagttcata caatcaacag tgtacgtcaa
     1441 caacgaaaaa agaatatacc tgccgaaaat cttgtactac tttgccaaag atctagcatt
     1501 gactatgata ggacttttgg agatagttaa ttcgtgttta tcggaacatc aacagaaggc
     1561 gttgaaagca tgcattaaag gtaaacccga gaagtacgta tactggttgt cccaaagttg
     1621 tatatttcga tatgttattc aactagacaa agtcgaagga agactatctg tttgatttaa
     1681 aatttttctt tcttttgtgc atttgtgaag gttgattaag tattaatttc tttttaaagt
     1741 tttagagtgt atagagttgt tttgaggatt ttgaatactg ga
//
LOCUS       XM_071830884             381 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cysteine proteinase
            inhibitor 1-like (LOC139840628), mRNA.
ACCESSION   XM_071830884
VERSION     XM_071830884.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..381
                     /gene="LOC139840628"
                     /note="cysteine proteinase inhibitor 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840628"
     CDS             1..381
                     /gene="LOC139840628"
                     /codon_start=1
                     /product="cysteine proteinase inhibitor 1-like"
                     /protein_id="XP_071686985.1"
                     /db_xref="GeneID:139840628"
                     /translation="MSLRDHTLHLTILFIIILNIFSVNVSLTLTEKIVNDDWKAIIDI
                     DDPKVTKAAEFAVEEHNRQENTSISFVYVSLGKTKTDDKGTHYRMTINAFDAHIGDYC
                     VYVIDKGNQKDYELVSFTGPLSKI"
     misc_feature    121..360
                     /gene="LOC139840628"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; Region: CY; cl09238"
                     /db_xref="CDD:447698"
ORIGIN      
        1 atgagtttaa gagatcatac tcttcacctt actattttat tcatcatcat tttgaatatt
       61 ttttccgtta acgtctccct cactttgacg gagaaaatag tcaatgatga ttggaaagct
      121 ataatagata tagatgatcc gaaagtgacg aaagctgcag aatttgcggt agaagaacac
      181 aaccgtcaag agaatacttc gatttctttt gtctatgtga gtctaggtaa gacgaagacg
      241 gatgacaagg gaacacatta tagaatgact attaacgcct tcgatgctca cattggtgat
      301 tattgtgttt atgttattga taaagggaat caaaaggatt atgagcttgt atcgtttaca
      361 ggacctttaa gtaaaattta a
//
LOCUS       XM_071830885             468 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840629), mRNA.
ACCESSION   XM_071830885
VERSION     XM_071830885.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..468
                     /gene="LOC139840629"
                     /note="uncharacterized LOC139840629; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840629"
     CDS             1..468
                     /gene="LOC139840629"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686986.1"
                     /db_xref="GeneID:139840629"
                     /translation="MNFAASLSKRFCVSDLVKRISVYSSATDVTGNGLSMVFRRWSTK
                     KSAGCAKNLHDSKPKYLGLKKFGGERVIPGNIIIRQRGTRFHPGDYVGMGKDHTLFAL
                     KEGTVRFEHRNISIERNKIRVRKLVHVDPKEGHLIHPIYLKLAADATKSDVSP"
     misc_feature    127..339
                     /gene="LOC139840629"
                     /note="Ribosomal L27 protein; Region: Ribosomal_L27;
                     pfam01016"
                     /db_xref="CDD:460025"
ORIGIN      
        1 atgaattttg cagcttcatt gagtaagaga ttttgtgtta gtgacttggt taaaagaatc
       61 tctgtttata gttctgcaac tgatgtaact ggaaatggat taagcatggt gttcagacgc
      121 tggtccacca aaaaatcagc cgggtgcgct aagaatttgc atgattcgaa acctaagtat
      181 cttggtttga agaagttcgg tggcgagaga gtgataccgg ggaatataat aatacgacag
      241 agaggcactc gttttcaccc gggagattat gttggtatgg ggaaagacca taccctcttc
      301 gcattaaaag aaggaactgt caggtttgaa cacagaaaca ttagcattga acgcaacaag
      361 ataagagtcc gcaagttggt gcatgtcgac cccaaagaag gccatctaat tcacccaatc
      421 tacttgaaat tagctgctga tgctactaag tcagacgtct caccgtaa
//
LOCUS       XM_071830886            1543 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/FBD/LRR-repeat protein
            At5g22700-like (LOC139840630), mRNA.
ACCESSION   XM_071830886
VERSION     XM_071830886.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1543
                     /gene="LOC139840630"
                     /note="F-box/FBD/LRR-repeat protein At5g22700-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:139840630"
     CDS             140..1543
                     /gene="LOC139840630"
                     /codon_start=1
                     /product="F-box/FBD/LRR-repeat protein At5g22700-like"
                     /protein_id="XP_071686987.1"
                     /db_xref="GeneID:139840630"
                     /translation="MRKRARISRRKGDQENDFNSNDYISGMPDDILVSILSKLPLKEA
                     ATTSNLSTKWRYLWCQTDCLDFDANDKLDKIAVGSKLRVIERPKYINWVNRVTRQHKA
                     QTIDEFRICFDFDKSSKCAIDKWVEFAISKRAQKLELDLLENCEMLRETPRNYVLPIK
                     IFDKSVGLTSKRRSLTFPKTVFSKEIGIKFLKYLYLKRVNVSEEALSKILVNCTALQQ
                     LSIHGSGDLVNVKISGKALVLKYLEIVFCFGVKLIEIIDSNIESLRYLGFGITIKLDD
                     VPRLQEISIGEWYSGFENNVFGQISCCISHLQILTLDIYCPEEDVKFVCIPELPKLRK
                     LILKIGAWDDDSLLEFTSLAKACPKLQRFVIQLIWMSPARRRRKIRHAAKHPHQHLEM
                     VEIVGYFGRTSDVELAVYFIENAIALKKLVIDPRYQVLERTPIGNDQLKNEKAARSCA
                     KKQLEPRRPKGVDLVIL"
     misc_feature    209..313
                     /gene="LOC139840630"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; Region: F-box_AtFBL13-like; cd22160"
                     /db_xref="CDD:438931"
     misc_feature    order(218..220,230..232,239..244,251..256,266..268,
                     272..277,287..295,299..301)
                     /gene="LOC139840630"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438931"
     misc_feature    710..784
                     /gene="LOC139840630"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    854..976
                     /gene="LOC139840630"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    977..1057
                     /gene="LOC139840630"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1058..1132
                     /gene="LOC139840630"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    1133..1216
                     /gene="LOC139840630"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    <1304..1408
                     /gene="LOC139840630"
                     /note="Region: FBD; pfam08387"
                     /db_xref="CDD:462458"
ORIGIN      
        1 tcggtttaaa atgttataat tccgccgcag aacccaactc aaaaacctca aatactatcc
       61 accaatttat cactactttc tgtttcaaat tcatgttcat aattataatt ataattatgt
      121 gttaattttt tatatttaga tgaggaaaag ggctcgaatc agtcgaagaa agggggatca
      181 agaaaatgat tttaattcaa atgattatat tagcggaatg ccagacgata tacttgtatc
      241 tatattatca aaactgcctc ttaaggaagc tgcaaccact agtaacctgt caacaaaatg
      301 gagatactta tggtgtcaaa cagattgtct agattttgat gctaatgata agttagataa
      361 aatagccgtt ggttcgaaat tgagggttat agagaggcct aagtatataa attgggtgaa
      421 ccgtgtgacc cgacaacata aggctcaaac cattgatgag ttcaggattt gttttgattt
      481 cgataagagt tctaaatgtg ctattgataa atgggtagag ttcgctatat ccaaaagagc
      541 tcaaaagcta gaattggatt tactagagaa ctgtgagatg ttacgtgaaa cgccccgaaa
      601 ctatgttctc cccatcaaga tttttgataa aagtgttggg ttgacttcca aacgccgctc
      661 tttgactttt cccaaaacgg ttttcagcaa agagatcgga ataaagtttc tcaaatattt
      721 atatttgaaa cgtgtaaatg tgagtgagga agctttatca aagattctag tcaattgtac
      781 ggctcttcaa caattatcga tacatggatc aggagatttg gtcaatgtca aaataagtgg
      841 gaaggctctt gttttgaagt accttgagat agtcttctgt tttggagtta aactaattga
      901 gataatagat tcaaatatcg aatcgttacg ctatttaggc tttgggatta cgataaaact
      961 cgatgatgtt ccaaggctgc aagaaatttc gataggtgaa tggtattcgg ggtttgaaaa
     1021 taatgtgttt gggcagatat catgttgcat ttctcacctt cagattctta cattggacat
     1081 ttactgtccg gaggaagatg taaagtttgt ttgtatcccc gaactaccaa aactcaggaa
     1141 attgatattg aaaattggtg catgggatga tgatagtctc cttgagttta cgtctttggc
     1201 aaaagcatgt ccgaaattgc agagatttgt gatacagtta atctggatgt caccagccag
     1261 gagaagaaga aagataaggc atgctgctaa gcatcctcat caacaccttg agatggtgga
     1321 aatagtcgga tatttcggtc gtactagtga cgttgaactt gctgtttact ttattgaaaa
     1381 cgcaattgca ctcaagaaac tcgtgattga tccacgatat caggttctgg agagaacccc
     1441 aatcggaaat gaccagttaa agaatgagaa agctgctaga tcttgtgcca agaaacagct
     1501 tgaaccaaga agacctaaag gtgttgactt ggttatactc tag
//
LOCUS       XM_071830887            1239 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840631), mRNA.
ACCESSION   XM_071830887
VERSION     XM_071830887.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1239
                     /gene="LOC139840631"
                     /note="uncharacterized LOC139840631; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840631"
     CDS             1..1239
                     /gene="LOC139840631"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686988.1"
                     /db_xref="GeneID:139840631"
                     /translation="MGRDLLGMDGAHMKPPATGHILTAVGLDSNNSIYPVAYAIVEQE
                     NYNSWSWFLECLGDDLGLTRQSNFTFISDRQKGLLQAVARMYPCAEHRFCLRHIHENM
                     KTKGFRGAAYKQLLWKCASATTVPYFEKAMLELKGFNVAAHTYLGKIPPSCWAKSHFS
                     GRAKSDVLLNNMCEVLNRWLLDARDKPIITALEYVREYLMKRIVTGINKVAKCNGPLT
                     PSATKLFESIKKDAHLCRVLWSGSNLYQVNGLHGEQCVVDIGERRCACRKWEITGIPC
                     KHAVACFWNMATNSQDVGPLERWFDPIYYLDTWNRAYCFTINPLNDRSLWPKSSISLP
                     LLPPLFTPSVGRLKKNRIKGFEERESLNNGGKLSRKGKSIKCGTCGIYGHNKRGCPSG
                     SKNVAGGSQMWKVVVKPSQI"
     misc_feature    64..303
                     /gene="LOC139840631"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    784..>843
                     /gene="LOC139840631"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atggggagag acctacttgg aatggatggt gcacacatga aaccaccagc aactggacat
       61 atattgactg cagtaggatt ggattcaaac aacagtatct atccagtggc ttatgcaatt
      121 gtggagcaag aaaattacaa ctcatggagt tggtttttgg agtgtttggg tgatgatcta
      181 gggttaacaa gacaatcaaa cttcactttc attagtgata gacaaaaggg tttacttcaa
      241 gctgttgcaa ggatgtatcc gtgtgctgaa cataggtttt gcttaaggca cattcatgaa
      301 aatatgaaga caaaaggttt taggggtgca gcttataaac aactcctgtg gaagtgtgct
      361 agtgccacta ctgttcctta ttttgaaaag gccatgcttg agttaaaagg tttcaatgta
      421 gctgcacaca catacttagg taagatacct ccaagctgtt gggcaaaaag tcatttttca
      481 ggaagggcaa agtcagatgt tctattgaat aacatgtgtg aggttttaaa tcgatggtta
      541 cttgatgcta gagacaagcc tataatcact gcattagagt atgtgagaga gtacctaatg
      601 aaaaggatag tcacagggat aaacaaagtt gctaaatgta atggaccact gaccccaagt
      661 gcaacaaaac tgtttgaatc aattaagaag gatgctcacc tatgcagagt tctttggagt
      721 ggtagtaatc tttatcaagt caatggactt catggtgaac aatgtgtagt tgacataggg
      781 gaaagaaggt gtgcttgtag gaaatgggaa atcacaggga taccatgcaa gcatgctgtg
      841 gcatgctttt ggaacatggc aactaattca caagatgttg gtccacttga gagatggttt
      901 gatcctattt actatttaga cacctggaac agagcatatt gtttcaccat taatccactt
      961 aatgatagat ctttgtggcc taaatcaagt atctctttgc cattactacc accattattt
     1021 acaccttcag ttggtagact aaaaaaaaat aggataaaag gttttgagga aagggaaagt
     1081 cttaacaatg gtggtaagtt gtctagaaag ggaaagagca taaaatgtgg aacttgtgga
     1141 atatatgggc ataacaaaag aggatgtcca agtggaagta aaaatgtagc tggtggaagt
     1201 caaatgtgga aagtggtagt caaacctagt caaatctaa
//
LOCUS       XM_071830888             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840632), mRNA.
ACCESSION   XM_071830888
VERSION     XM_071830888.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139840632"
                     /note="uncharacterized LOC139840632; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840632"
     CDS             1..804
                     /gene="LOC139840632"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686989.1"
                     /db_xref="GeneID:139840632"
                     /translation="MLESNKEATVAERITQNNGLSLGNWCWSRSPYGRVLNELTELNN
                     IISSVTLSEKPDSWKCSLDPSGTYTTKSMAHLINSLKLGGNTLNMTIPRNNLLPQKVF
                     IFIWRAFQKKIPTRFELDKRGIDLDSILCPLCESDIETIEHSLVLCPKSTQIWKHVLD
                     WWNQDHSLISNLNDAIINKQTFTHNNLGSSIWQATKWITCYMLWKHRNAKVFSKKVWS
                     IASILSEIQSQSFSWISKRLSKKKPIIWHQWLINPSFFVADPPHRVGIG"
     misc_feature    <280..462
                     /gene="LOC139840632"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgctcgagt ccaataaaga agcaacagtc gctgaaagaa tcacgcaaaa taatggactt
       61 tcactcggta attggtgctg gtcacgatct ccatacggcc gtgttctcaa tgaattaact
      121 gaactaaaca atataatttc ctccgtgaca ttgtccgaaa aacccgactc ttggaaatgt
      181 tctctcgacc cttcgggcac ttacaccacc aaatctatgg cacacttgat aaactccctt
      241 aagcttggtg gtaataccct caacatgacg attccccgca acaatctact accacaaaaa
      301 gtcttcattt tcatatggcg agcatttcaa aaaaagatac ctactagatt cgaattagac
      361 aaacgtggta ttgatctcga ctccatcctt tgccctttat gcgaatcgga catagaaacc
      421 attgagcatt ctcttgttct ttgtccaaaa tcgacccaaa tatggaaaca cgtactagat
      481 tggtggaacc aagaccactc actaatttca aaccttaatg acgctatcat caataagcaa
      541 actttcacac acaacaatct cggctcttca atatggcaag caaccaaatg gattacatgt
      601 tacatgttat ggaaacatag aaacgcaaaa gtattctcca aaaaagtctg gtccattgca
      661 tcgatcctct ccgaaattca atctcaaagt tttagctgga tctccaaaag attgagtaaa
      721 aagaaaccta tcatatggca ccaatggctc atcaatcctt cattctttgt ggcggatccc
      781 ccacatcgtg tcggcatcgg ttga
//
LOCUS       XM_071830889             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lachrymatory-factor
            synthase-like (LOC139840633), mRNA.
ACCESSION   XM_071830889
VERSION     XM_071830889.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139840633"
                     /note="lachrymatory-factor synthase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840633"
     CDS             1..627
                     /gene="LOC139840633"
                     /codon_start=1
                     /product="lachrymatory-factor synthase-like"
                     /protein_id="XP_071686990.1"
                     /db_xref="GeneID:139840633"
                     /translation="MPHKSTELSCRNCFSPGNKLNNQGEGCPMFDGCRLSCLMESYDL
                     FAHKDEENWPENQWRGSVGGIVDAPVDKVWYIVSKTDWLTEWMPMVETCTHLKGVEGQ
                     PGYVRLVSGFMFPHDDGDRSWIKERLVSMDPLLHKFSYKMEATNVGLDGSLNSLKLID
                     YGDDSTLVDWSFEISPVEGASEESLIDYLGFLYKSCINKISGAIKASS"
     misc_feature    172..600
                     /gene="LOC139840633"
                     /note="Pyrabactin resistance 1 (PYR1), PYR1-like (PYL),
                     regulatory component of abscisic acid receptors (RCARs),
                     and related proteins; Region: PYR_PYL_RCAR_like; cd07821"
                     /db_xref="CDD:176863"
     misc_feature    order(178..180,184..186,190..192,217..225,229..234,
                     259..261,265..267,277..279,313..315,319..321,325..327,
                     331..333,370..372,376..378,382..384,391..393,412..414,
                     418..420,424..426,445..447,454..462,466..468,472..474,
                     502..504,508..510,514..516,520..522,553..567,571..579,
                     583..591,598..600)
                     /gene="LOC139840633"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:176863"
     misc_feature    order(262..267,271..273,355..360,442..447,550..555,
                     559..564,571..573,583..585)
                     /gene="LOC139840633"
                     /note="protein interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:176863"
     misc_feature    order(355..360,364..366)
                     /gene="LOC139840633"
                     /note="gate; other site"
                     /db_xref="CDD:176863"
ORIGIN      
        1 atgccacaca aatcgaccga gttgtcttgt agaaactgtt tttcaccggg caataaatta
       61 aacaatcaag gagagggttg tcctatgttt gatggctgta gattgtcttg tttgatggaa
      121 tcatatgatc tttttgccca taaagatgaa gaaaattggc ctgaaaacca atggcgaggt
      181 tcggttgggg gcatagtcga cgcacctgta gacaaagtat ggtacatagt atcaaaaact
      241 gattggctaa ctgaatggat gcctatggtt gaaacatgta cccatctaaa aggcgtcgag
      301 ggtcaacctg gctatgttcg attagtctca ggattcatgt tccctcacga tgatggtgat
      361 cgatcttgga tcaaggaacg actagtttcc atggacccgt tattgcacaa attttcatat
      421 aaaatggaag ctaccaatgt gggcttggat gggtccctaa attcactcaa actcatagat
      481 tatggggatg attctactct tgtagactgg tcctttgaaa taagtccagt tgaaggtgca
      541 tcagaagaaa gtctaattga ttatcttgga tttttgtata aatcatgtat taacaagatt
      601 tcaggtgcta ttaaagcttc atcatga
//
LOCUS       XM_071830891            1596 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides berberine bridge enzyme-like
            8 (LOC139840635), mRNA.
ACCESSION   XM_071830891
VERSION     XM_071830891.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1596
                     /gene="LOC139840635"
                     /note="berberine bridge enzyme-like 8; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139840635"
     CDS             1..1596
                     /gene="LOC139840635"
                     /codon_start=1
                     /product="berberine bridge enzyme-like 8"
                     /protein_id="XP_071686992.1"
                     /db_xref="GeneID:139840635"
                     /translation="MTISNLALLLFFISTNSFAYQEIINNFIDCLNNRSDPNFPITAT
                     LYTYDNSSFSSVYNAYIRNPRLKDIRTTKPSLIITPLHFSHIQTAIICARKHNLEMRT
                     RSGGHDYEGLSYLSLTDPKPFFILDTFNLNQVDVNIEDETVWVQTGATLGEVYYHIAN
                     KSNVHGLPGGVCPTVAVGGHCSGAGYGNMIRKYGLTIDNIIDAQLIDVNGVFLDRNSM
                     GEDLFWAINGGGGASFGVVYAYHFKLVRVPPIVTIFKPETTSETKILNVSNKWLHVAD
                     KLDNDLYIRMRFQTLKNEKGKQIIHATFPSLFLGNKTRLISLMNKNFPELGLQDSDCV
                     EMSWVESTLVYAGFPVGTPIESLLSRSQQDKRQRPFKIKSDFVQRPISKLGTETIFLK
                     MKELQNQMITFNPLGGRLNEVSEFATPYAHRTGNIALIEYETYWSEPGEEATNRNLGS
                     ARKMHEHMSPFVSKNPRQAFFNYRDLDIGINHHGKDSSSEGLIYGVKYFKEANYKRLV
                     MVKTKVDPDNFFRNEQSIPPMQS"
     misc_feature    220..630
                     /gene="LOC139840635"
                     /note="FAD binding domain; Region: FAD_binding_4;
                     pfam01565"
                     /db_xref="CDD:426326"
     misc_feature    1405..1581
                     /gene="LOC139840635"
                     /note="Berberine and berberine like; Region: BBE;
                     pfam08031"
                     /db_xref="CDD:369658"
ORIGIN      
        1 atgacaatct ccaatctagc ccttctccta ttcttcatat ccacaaattc atttgcatat
       61 caagagatca tcaacaactt catagactgt ctaaacaacc ggtcggaccc taattttccg
      121 atcaccgcga ccctctacac ttacgacaac tcttcattct cttccgtata caatgcatac
      181 atcagaaacc ctcgtttaaa agacatacga accaccaaac cctcattaat catcactcca
      241 ttacactttt cacacattca aaccgctata atttgcgcaa gaaaacacaa ccttgaaatg
      301 agaacaagaa gtggtggaca tgattacgaa ggcctttcgt acctatcttt aaccgatccg
      361 aaaccctttt tcattcttga cacgtttaat ctgaaccaag ttgatgttaa tattgaagac
      421 gaaacagttt gggtccaaac gggtgccaca cttggtgaag tttattacca tattgctaac
      481 aaaagtaatg ttcatggtct tcctggtgga gtttgtccta cggttgcagt tggtggtcat
      541 tgtagtggtg ctggttatgg taatatgatt cgaaaatacg gtctaacgat tgataatatt
      601 attgatgctc aacttataga tgtaaacggt gtgttcttgg atagaaattc aatgggggaa
      661 gatttatttt gggctattaa tggtggtggt ggagcaagtt ttggtgtggt ttatgcatat
      721 cactttaaac tagttcgtgt tccacctatc gtaacaattt ttaaacctga aaccacatcg
      781 gaaacaaaga ttttaaacgt ttcgaataaa tggttacatg ttgccgataa attggacaat
      841 gatctctaca ttcgaatgag atttcaaacg ttaaagaacg aaaagggaaa gcagattata
      901 catgctacat ttcctagttt gtttcttgga aacaaaacaa gacttattag tcttatgaac
      961 aaaaatttcc ctgaattagg gttacaagat tcagattgtg ttgaaatgag ttgggtcgag
     1021 tctacactgg tttatgcagg ctttcctgtg gggacaccca tagaaagcct actttcgcga
     1081 agccaacaag ataaaagaca aagaccattc aagatcaaat ctgattttgt acaaagacct
     1141 atttcaaaac ttggaacgga aactatattc ttgaaaatga aagaactcca aaaccaaatg
     1201 attacattta atccgttagg tggacgatta aacgaggtgt cagagtttgc aacaccgtat
     1261 gcacatcgaa cagggaacat tgcattgata gaatatgaaa cgtattggag tgagccaggg
     1321 gaggaagcga ctaaccgaaa tttagggtct gcgaggaaaa tgcatgagca tatgagtccg
     1381 tttgtgtcaa agaatcctag gcaagcattt tttaattata gggacttgga cattggtata
     1441 aaccatcatg ggaaggatag ttcttcggaa gggctaattt atggagttaa gtattttaaa
     1501 gaagctaatt ataagaggct tgtgatggtg aagaccaaag ttgatcctga taatttcttt
     1561 agaaatgaac aaagtattcc acctatgcaa tcttga
//
LOCUS       XM_071830892             348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein cL38 (LOC139840636), mRNA.
ACCESSION   XM_071830892
VERSION     XM_071830892.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..348
                     /gene="LOC139840636"
                     /note="large ribosomal subunit protein cL38; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139840636"
     CDS             1..348
                     /gene="LOC139840636"
                     /codon_start=1
                     /product="large ribosomal subunit protein cL38"
                     /protein_id="XP_071686993.1"
                     /db_xref="GeneID:139840636"
                     /translation="MSVSAIFGVKLSPNPSVGLGSYTRVPSAVVTVDNKNNNLRIGGG
                     GGEGLIIECSSRPQKKATAHHRKTRPKKTQPWDRNRGPTVYPPLPSLPSEWSFAPATD
                     NDSQVESSPSSSE"
     misc_feature    157..315
                     /gene="LOC139840636"
                     /note="Family of unknown function (DUF5323); Region:
                     DUF5323; pfam17257"
                     /db_xref="CDD:375084"
ORIGIN      
        1 atgtcggtgt ccgcaatttt cggagtgaaa ttatccccaa accctagtgt tggtctaggt
       61 tcgtacacga gggtaccatc agcggttgtt actgttgata ataagaacaa taatttacgt
      121 attggaggag gaggaggaga agggttaata attgagtgtt catcaaggcc acagaagaag
      181 gcgacagctc atcaccgtaa aacacggcca aagaagactc aaccgtggga taggaaccgt
      241 ggccccaccg tttatccacc gctaccttct cttccttctg agtggagttt tgctcctgct
      301 actgataatg attctcaggt tgaatcttct ccatcttcat ccgagtag
//
LOCUS       XM_071830893            1488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840637), mRNA.
ACCESSION   XM_071830893
VERSION     XM_071830893.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1488
                     /gene="LOC139840637"
                     /note="uncharacterized LOC139840637; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840637"
     CDS             1..1488
                     /gene="LOC139840637"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686994.1"
                     /db_xref="GeneID:139840637"
                     /translation="MNVFPHKKQPLLYSPASPFPINCRRLLPEINFSGWLPLTTPFIC
                     VDPTLTYGYLRSCPPTLGVSRTRGVRSGSRVATLGMIRVGSWNIGTLTGKRIELVDTF
                     LKSNVDIVCVQETRWKGEGAVDIKDYRLWYSGSRIARNGIGIFLGKLHKDNVVDVGRF
                     SDRIMSVSLIIKEETFTVISAYAPHAGLSEAEKKSFWELLDEVVRGCPADHRLIIGGD
                     LNGHIGAEAEGYEGAHGGFGFGPRNEEGRSILEFAVAHELVIANSFFKKRDSQLATFH
                     SGGRCTQIDFLILRKGELRTCKDCKVLPALTCSSLHRLLVMDIVTRGRVGRRARVVQH
                     RILWKNLHGAKAETFRATVADRLSVEGDNVAPTDVDQIWNRMASTIREVAKEALGVTL
                     GTSRAHKSSRESWWLSDDVQTKVTLKQMRFRELITFGEGTSAERTRVEERYKEAKREE
                     KKINYDDDVTGSMHEDDVKVMTDVNYDDDNGMTIMKMIRNDDLRL"
     misc_feature    247..957
                     /gene="LOC139840637"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(259..261,340..342,544..546,652..654,658..660,
                     853..855,931..936)
                     /gene="LOC139840637"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(340..342,931..933)
                     /gene="LOC139840637"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(544..546,658..660,934..936)
                     /gene="LOC139840637"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atgaacgttt ttcctcacaa gaaacaacca cttttgtact cgccggcctc accgtttccc
       61 atcaattgcc gccggctgct accggaaatt aacttttccg gctggttacc tcttaccact
      121 ccctttattt gtgttgaccc tacacttact tatggttact tgaggtcatg tcctcctacc
      181 ttaggggtga gtaggactag aggggttaga agcggtagta gggtagccac ccttggtatg
      241 attagagtgg gtagttggaa tataggaaca ttgacgggca agaggattga gctcgttgat
      301 acctttctta agagtaatgt ggacatagtg tgtgttcaag agactagatg gaagggtgaa
      361 ggggcggtag atattaagga ctataggttg tggtactcgg gttctaggat agcacggaac
      421 gggataggta tctttttggg aaaactacat aaggataacg ttgttgacgt gggtaggttt
      481 agcgatagga ttatgtcggt tagtcttatt attaaggagg agactttcac ggtcattagc
      541 gcatacgcac ctcatgcggg tttaagtgag gcggaaaaga agagtttttg ggaattgtta
      601 gatgaggtag tgagggggtg cccagcggat catcgattga ttataggggg tgatctgaat
      661 ggacacatag gagcggaggc agaaggttac gagggagccc atgggggctt tgggtttggt
      721 cctagaaacg aagaagggcg ctcgattctt gagtttgccg ttgcccacga gttggttata
      781 gcaaactctt tcttcaagaa gagggattct cagttagcca cttttcatag cgggggtcgt
      841 tgcacccaga ttgacttttt gatccttcgt aaaggggaac ttaggacatg taaggactgt
      901 aaggtccttc cagccttgac gtgctcctcc ctgcatagat tgttggtcat ggacatagtc
      961 acccggggaa gagttggcag gagggccagg gttgtgcaac atagaatcct ttggaagaac
     1021 ctacatggtg cgaaagcgga gacttttaga gcgactgttg ctgatagatt gagtgtagaa
     1081 ggggataacg tagctcctac tgacgtagac cagatatgga accgcatggc atctactatc
     1141 agagaggtgg caaaagaagc tttaggggtg acattaggga catcgagagc ccacaagagt
     1201 agtagagaat cgtggtggct tagtgatgat gtccaaacga aagttacgtt aaagcagatg
     1261 aggtttaggg agctcattac ctttggagaa gggacgtctg cagagaggac tagggtagaa
     1321 gaaagatata aagaagctaa aagggaagaa aagaagataa attatgatga tgatgttacg
     1381 ggttcgatgc atgaggatga tgtgaaggtg atgaccgatg taaattatga tgatgataac
     1441 ggtatgacaa taatgaagat gattagaaac gatgatttaa ggttatga
//
LOCUS       XM_071830894             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840639), mRNA.
ACCESSION   XM_071830894
VERSION     XM_071830894.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 67% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139840639"
                     /note="uncharacterized LOC139840639; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840639"
     CDS             1..720
                     /gene="LOC139840639"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686995.1"
                     /db_xref="GeneID:139840639"
                     /translation="MRASSSIGLGLSLVFGCLLLAPVAELYYLLWWKKRVTNREMIQE
                     SYSSPTRELFYMFCLKKPSSLTTDTLVHEPQVTSEYGNTDLWLSQFSQDQEYENELEH
                     NDASTRFLFTIKEETKEDLESEDMSDVIYVDTPFFTPLALPVYFTPPITPGDYTYRTF
                     SPLFESASDSEFIKIWASPPPKFKFLRDAKDKLQKKLMKRFDDDEDEDEDEDEDGVKD
                     EENGSYITLDVSTGVFVQLLV"
ORIGIN      
        1 atgagagctt caagtagtat aggacttggt ttaagtcttg tttttgggtg tttgttacta
       61 gctcctgttg ctgaacttta ctacttgtta tggtggaaaa aaagggtgac aaatagagaa
      121 atgattcaag aaagttactc tagtccaaca agagaattat tctacatgtt ttgcttgaaa
      181 aagccctcat ctttgaccac agacacacta gttcatgaac cacaagttac atcagaatat
      241 ggaaacacag acttatggct cagtcaattt agtcaagatc aagaatatga aaatgaactt
      301 gaacataacg atgcatctac gagatttttg tttacaataa aagaagaaac aaaagaggat
      361 ttagaatcag aagatatgag tgatgtaata tatgtggata caccattttt tacaccactt
      421 gctttacctg tgtacttcac tccacctata acacctggtg attatacgta tagaactttt
      481 agtcctttgt tcgagtcagc aagtgattca gaattcatca agatttgggc ttcaccacct
      541 cctaagttta agttcttgag agacgcgaaa gataaacttc aaaaaaagct tatgaaaaga
      601 tttgatgatg atgaagatga agatgaagat gaagatgaag atggagttaa ggatgaagaa
      661 aatggttctt atatcacatt agatgtttct acaggcgttt tcgtacaact actagtctaa
//
LOCUS       XM_071830895            1050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At2g39510-like (LOC139840640), mRNA.
ACCESSION   XM_071830895
VERSION     XM_071830895.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1050
                     /gene="LOC139840640"
                     /note="WAT1-related protein At2g39510-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139840640"
     CDS             1..1050
                     /gene="LOC139840640"
                     /codon_start=1
                     /product="WAT1-related protein At2g39510-like"
                     /protein_id="XP_071686996.1"
                     /db_xref="GeneID:139840640"
                     /translation="MLKEWLKGVYVRTEPFIFMIFLQTSYAVNGLIVKSALNKGLNHY
                     TFAVYRNAFAALFFAPFAFFFERKVRPKMTVSIFLKIMLLGLLEPVIDQNLYFSGMKY
                     TTATFAAAMCNIVPAITFVLAWIFRLEKVKMTSLHSQGKIIGTLVTVGGAMIMTLITG
                     PVIQFPWSKNHHTIHHHSSVNTVSSQDQIKGSLMITAGCFSWASFIIVQAVTLKSYPA
                     ELSLTTLVCLMGSLEGSVLSLIAEKGNASIWLLDWDIKLFAALYSGIVCSGCAYYISG
                     LVMQQRGPVFVTAFNPFGMVIIAIVASCVLAEKLNLGSVIGAIFIVAGLYLVIWGKGK
                     DQNQSSSEIDVVLAS"
     misc_feature    34..1026
                     /gene="LOC139840640"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
ORIGIN      
        1 atgttaaaag agtggcttaa gggggtgtat gttcgtaccg agcctttcat tttcatgatt
       61 ttcttgcaaa cttcgtacgc ggttaatggt ttaatagtca agtctgcact aaacaaaggc
      121 ttaaatcatt acacttttgc tgtttatcgg aatgcgtttg cagctctctt ctttgctcct
      181 tttgctttct tctttgaaag gaaagttagg cccaaaatga cagtttccat cttcttgaaa
      241 attatgcttc tcggactact agagcctgta atagaccaga atttgtactt ttctggaatg
      301 aagtatacaa cggcaacatt tgcagctgct atgtgcaata tcgttcctgc cattactttc
      361 gttttagctt ggattttcag acttgagaag gtcaagatga cgagtttaca tagccaaggg
      421 aagataattg ggacgttagt tacagttgga ggagcgatga taatgacact aataacaggc
      481 cccgtgattc aatttccatg gtcgaaaaat caccatacga ttcatcatca ttcttccgtt
      541 aatactgtta gtagtcaaga tcagattaaa ggatctctca tgatcacggc cggttgtttt
      601 tcgtgggcaa gtttcatcat agttcaagca gtgacattaa aatcataccc agctgaactc
      661 tcactaacaa cgctcgtgtg tctgatgggc tcattggaag ggtctgtact atcacttatt
      721 gccgaaaagg ggaatgcgtc aatctggtta cttgattggg acatcaaatt attcgcagcg
      781 ctatatagtg gaatagtgtg ttctggatgc gcatattaca tatcaggact agtaatgcaa
      841 caacgaggac cggtttttgt gacagctttt aacccttttg ggatggttat tattgcaatt
      901 gtggcgtctt gtgttctagc cgaaaagttg aacttgggaa gtgttattgg agcaatattt
      961 attgttgctg ggctatatct ggtcatatgg ggtaagggca aggaccaaaa tcaatcatca
     1021 agcgagatag acgttgtact agcaagttaa
//
LOCUS       XM_071830896            2029 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ankyrin repeat-containing
            protein ITN1-like (LOC139840641), mRNA.
ACCESSION   XM_071830896
VERSION     XM_071830896.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2029
                     /gene="LOC139840641"
                     /note="ankyrin repeat-containing protein ITN1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 Proteins"
                     /db_xref="GeneID:139840641"
     CDS             1..2022
                     /gene="LOC139840641"
                     /codon_start=1
                     /product="ankyrin repeat-containing protein ITN1-like"
                     /protein_id="XP_071686997.1"
                     /db_xref="GeneID:139840641"
                     /translation="MTEALPGLPGDVPFLDGWQCPKVLVISSDIVTVELAELDVIIIE
                     IIQKRPKEVCANGGKTICFRAYKTSCRSTMNDQTMRELLCIFLVEQDVKENTDRKIYL
                     NRRNTTQTKQNQNIKLLDPSLSPSSTSSPSLVLTASGKRIDQAGKKKYVKQVTGKHND
                     TQLHLAAQRGDLAALKQILDEINSQMVGTLSGADFDAEVAEIRASVVNDVNELGETAL
                     YTAAEKGHLEVVNELLKYSDKDVLTRRNRLEFDPLHIAASQGHHAIVKLLLDHDVSLC
                     QTRSLGNATPLITAASKGHTAVVQELLSKDPSLLDIPRSNGKNALHLAARSGHVETLK
                     TLLNKDPQLARRTDKKGQTALHMAVKGASSEVVKLLLEADAAIVMLPDKSGFTALHVA
                     TRKMRSEIVNELLSLPDTNVNALTRDHKTALDIAEGLSLSEESTDIKASLVRRGAVRA
                     NELNQPRDELRNTVTQIKNDVHIQLLQTKKTNKNVHGIAKELRKLHREGINNATNSVT
                     VVAVLFATVAFAAIFTVPGGDNDNGMAVVVHRISFKIFFIFNAIALFTSLAVVVVQIT
                     LVRGETKAERKVVMVINKLMWLASVCTSVAFMASSYIVVGRRYEWVAILITVVGGVIM
                     AGVLGTMTYYVVKSKKTRSMRRREKAKSGTNSWMASEFSNSDVERIYAI"
     misc_feature    472..633
                     /gene="LOC139840641"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    487..1362
                     /gene="LOC139840641"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    640..738
                     /gene="LOC139840641"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    742..837
                     /gene="LOC139840641"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    853..942
                     /gene="LOC139840641"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    order(946..948,952..954,964..969,976..984,988..993,
                     1003..1005,1012..1014,1042..1044,1048..1050,1054..1056,
                     1066..1071,1078..1086,1090..1095,1105..1107,1114..1116,
                     1144..1146,1150..1152,1156..1158,1168..1173,1180..1188,
                     1192..1197,1207..1209,1216..1218)
                     /gene="LOC139840641"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    946..1044
                     /gene="LOC139840641"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1048..1146
                     /gene="LOC139840641"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1492..1812
                     /gene="LOC139840641"
                     /note="Domain of unknown function; Region: PGG; pfam13962"
                     /db_xref="CDD:433609"
ORIGIN      
        1 atgactgagg ctttaccagg acttccagga gacgttcctt ttcttgatgg atggcaatgt
       61 ccaaaagtcc tagtcatttc cagtgatata gttactgtcg agcttgccga gctagacgta
      121 attattatag aaatcattca aaaaagaccc aaagaggtat gcgcaaatgg tggaaagacc
      181 atttgttttc gtgcatacaa aacaagttgc agatctacta tgaacgacca aacaatgcgg
      241 gaacttttgt gcattttttt ggtagaacaa gacgttaagg aaaatactga cagaaaaata
      301 tatttaaaca gaagaaacac gactcagacg aaacagaatc aaaatattaa actactcgat
      361 ccgtcactat caccgtcttc tacatcttct ccatcgttag tacttacagc ttccgggaaa
      421 cgaatcgatc aagcaggaaa aaagaagtat gttaaacaag taacaggtaa gcataatgat
      481 actcagcttc atttagcagc gcaacggggt gatctggcgg ctttgaagca aattcttgat
      541 gaaattaatt cacaaatggt gggaacttta agtggagctg attttgatgc tgaggtggca
      601 gagatccgag cgtctgtagt gaatgatgtg aatgagttag gtgaaactgc attgtatacg
      661 gctgccgaaa agggacatct tgaggttgtt aacgaacttt tgaagtattc tgataaagat
      721 gtgcttacga gacgaaatcg tttggagttt gatcctttgc atatagctgc tagtcaagga
      781 caccacgcca tagtcaaact cctacttgac catgacgtat cactatgcca gaccagatca
      841 ctaggaaacg cgactcctct cattactgca gcttcgaaag gacacactgc agttgttcaa
      901 gaactacttt caaaggatcc tagcttatta gatattccca gatctaacgg taaaaatgca
      961 ttgcatctag cagcacgatc gggccatgtt gagactttaa aaactttgct caacaaggac
     1021 ccacaactgg cccgaaggac agataaaaaa ggccaaacgg cgttacatat ggctgtaaaa
     1081 ggggctagca gcgaggtcgt taagttgctg cttgaggctg atgcagctat cgtaatgctg
     1141 ccagataagt ctggttttac tgcattgcac gttgctacaa gaaaaatgag atcagagata
     1201 gtaaacgagc tacttagtct tcctgacaca aatgttaacg cgctaactcg agatcacaaa
     1261 accgcactcg acatagcaga aggcctttcg ctatctgaag agtctacaga tataaaggcc
     1321 agcctggtcc gtcgtggtgc agttcgagcc aacgaactga accaaccaag agacgagtta
     1381 agaaacaccg taacccaaat caaaaacgac gtccacatac agctcttaca aaccaaaaaa
     1441 acaaataaaa atgtacatgg gatagcaaaa gaactaagaa aactccatcg tgaagggatc
     1501 aataacgcga ctaattcagt aactgtagtc gctgtgcttt tcgcaactgt cgctttcgcc
     1561 gccatattca cagtgccagg tggcgacaac gataatggga tggcggtggt ggttcaccgg
     1621 atttcattta aaatattttt tatatttaat gctattgctc tttttacttc cttagctgtg
     1681 gtggtggttc aaatcacatt ggttagaggt gaaactaaag ctgaaagaaa agtggtcatg
     1741 gttattaata agttgatgtg gttagcttcg gtatgcactt cggttgcgtt tatggcatcg
     1801 tcttatatag tggttggtcg aagatacgaa tgggttgcta ttttgattac ggttgttggt
     1861 ggtgttataa tggcgggggt acttggaacg atgacttatt atgtggttaa gtcgaagaaa
     1921 actcgttcga tgagaaggag agaaaaggcg aaaagtggga cgaattcgtg gatggcttct
     1981 gagttttcga actcggacgt cgaaagaatt tatgctattt gatgtgcag
//
LOCUS       XM_071830897             657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840643), mRNA.
ACCESSION   XM_071830897
VERSION     XM_071830897.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..657
                     /gene="LOC139840643"
                     /note="uncharacterized LOC139840643; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840643"
     CDS             1..657
                     /gene="LOC139840643"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686998.1"
                     /db_xref="GeneID:139840643"
                     /translation="MEIGYGFGGGIFAEISNEADTWVWDGASHNKYSVSAARKSIDLH
                     FNAQFTRPTFWSALFPSKINIFLWRLRLNRLATKDNIARKGIELPHGNCIWCVSHEET
                     ASHVFCACDISRQIWCNIGSWINIFIPTWNSLDDFWIWFDSIQLNGKRLMVVRSIIFS
                     TLWNIWRLRNSYIFNDKNFRIANVLDNIIVSSFFLLFSRYKKARINWSTWLQNPLESL
                     "
     misc_feature    94..348
                     /gene="LOC139840643"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggagattg gttatggttt tggaggcggg atattcgcgg agatttctaa tgaggcagac
       61 acttgggttt gggatggtgc atcacataat aagtactcgg tttctgctgc gaggaaatct
      121 attgacttgc acttcaatgc ccaatttact cgacccacct tttggtctgc gttgttccct
      181 tcaaaaataa acatcttctt atggcgcctc cggttgaatc gtctcgctac aaaagataat
      241 attgctagaa aaggtatcga gctcccacat ggtaactgca tttggtgtgt ttctcatgag
      301 gaaacagctt cacatgtttt ttgtgcatgt gatattagta gacaaatttg gtgcaacatt
      361 gggtcatgga tcaacatatt tattcctaca tggaactctt tggatgactt ttggatttgg
      421 tttgattcga tccagttaaa cggcaagagg ctcatggtgg tgagaagcat tattttctcg
      481 actctttgga acatatggcg gttaaggaat agttacatat tcaatgataa gaacttccgg
      541 atagcgaacg ttttagacaa tatcattgtt tcttcatttt ttttgctttt ctctagatac
      601 aaaaaagcta gaataaactg gtccacatgg ctgcaaaatc cattggaatc tttgtag
//
LOCUS       XM_071830898            1954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840644), mRNA.
ACCESSION   XM_071830898
VERSION     XM_071830898.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1954
                     /gene="LOC139840644"
                     /note="uncharacterized LOC139840644; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139840644"
     CDS             1..1839
                     /gene="LOC139840644"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071686999.1"
                     /db_xref="GeneID:139840644"
                     /translation="MVVHLFEGRDIEKIMKRQRKKVDEGPRFRKLAEMQETMTNLGKS
                     GGVYIPPFKLSRLMSELQDKSSMEYQRMTWDTLRKSINGLVNKVNATNIKNIIPELFS
                     ENLIRGRGLFCRSCMKSQMASPGFTNVFAALVAVVNTKFPEVGGLLLRRIILQLQRAY
                     KRNDKHQLVAAVKFIAHLVNQQVVYELIALELLTTLLENPTDDSVEVAVGFVTECGSI
                     LQDLSPKGLHGVFERFRGILHEGGIDKRVQFLIEGLFALRKAKFQGYPAVHPDLDLVN
                     LEDQLTHEVSLLDKFDPEITLDIFKLDPNFIENKKRYEDVKKTILGDESSEDEENGGE
                     ESDDEESSQEEEEDEEQMTIRDETETNLVNLRRTIYLTIMNSVDFEEAGHKLLKIKLE
                     PGQEMELCIMLFECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLE
                     TNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRV
                     LNERLSDPTMQADFESLFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQ
                     QKPASEPDHSDSSSSGSDSSSSDESDSDAERSDSESDHKSSKRRRR"
     misc_feature    235..783
                     /gene="LOC139840644"
                     /note="Middle domain of eukaryotic initiation factor 4G
                     (eIF4G); Region: MIF4G; smart00543"
                     /db_xref="CDD:214713"
     misc_feature    1093..1413
                     /gene="LOC139840644"
                     /note="MA3 domain; Region: MA3; pfam02847"
                     /db_xref="CDD:397128"
ORIGIN      
        1 atggttgttc acttgtttga gggcagggac attgaaaaaa taatgaaacg gcaaaggaag
       61 aaagtagatg aaggtccaag gttcagaaag ttggctgaaa tgcaagaaac aatgactaat
      121 ttaggaaaga gtggaggggt ttatatacca ccgtttaagt tatctcgttt gatgagcgaa
      181 cttcaagata aaagcagcat ggaatatcaa aggatgacat gggacacatt aaggaagagt
      241 ataaatgggt tagtcaacaa ggtcaatgcc acaaatatca agaacattat cccagaattg
      301 ttttctgaga atttaattag aggaagaggt ctattttgtc gatcttgtat gaagtcacaa
      361 atggcctctc ctggttttac gaacgttttt gcagcgctcg ttgctgtagt taatacgaag
      421 ttccctgaag tgggaggcct tttgctgaga aggattattc tacaactaca aagagcttat
      481 aagcgaaatg acaagcatca attggtagct gcagtgaagt ttatcgccca tttggtgaac
      541 cagcaggtag tttatgagtt aattgctctt gaactattga caactctttt agagaatcca
      601 accgatgata gtgtggaagt tgcggttggt tttgtgaccg aatgtggctc aatacttcaa
      661 gatctgtctc ccaaaggctt gcatggtgtt tttgagcgtt ttcgtgggat tcttcacgag
      721 ggaggaatcg acaaaagggt gcagtttttg attgaaggtc tctttgcgct aagaaaggcc
      781 aagttccagg gatatccggc tgttcatccg gatttggatc tcgttaacct agaagaccag
      841 ttaacccacg aagtttctct tcttgataag ttcgatccag agattaccct agatattttc
      901 aagttggatc ctaatttcat tgagaacaaa aagcggtatg aagatgtgaa gaaaaccatt
      961 ctcggtgatg aatcttcaga agatgaagaa aatggtggtg aggaatctga tgacgaggag
     1021 tcatcgcaag aagaagaaga agacgaggag caaatgacga tccgagatga aacggaaaca
     1081 aatcttgtta atctcaggcg gaccatatac ctgacgatta tgaatagtgt tgattttgaa
     1141 gaagctggtc ataagctttt gaaaattaaa ctggagccag gacaagagat ggaattgtgc
     1201 attatgttat ttgaatgctg cagtcaagag agaacttacc ttcgttacta tgggcttttg
     1261 ggtcagcgtt tttgtatgat caataaaata caccaagaaa atttcgaaaa gtgctttgtt
     1321 caacagtatt caatgataca tcggcttgaa acgaataagt tgcggaacgt tgcgaagttt
     1381 tttgcccatc ttcttgggac cgatgctttg ccttggcatg ttttggcata cattcgacta
     1441 actgaagaag atacaacgtc ctcttcacga atctttatta agattctttt tcaggagctg
     1501 tccgaacatc ttggaattcg tgtcttgaac gaacgcctca gtgatcccac aatgcaggct
     1561 gattttgaat ctcttttccc acgggacaat ccgaaaaaca cacggttttc aatcaacttc
     1621 tttacatcga tcgggctcgg aggaatcaca gaaaacttga gagagtattt gaagaatatg
     1681 cctcgtctta tcatgcagca aaaacctgcc tctgaaccag accattctga ttcttctagt
     1741 tcaggatccg actcatcaag ctccgatgaa agtgacagtg acgccgaacg tagtgatagt
     1801 gaaagtgatc acaagagcag caaacgcagg aggcgataga tccttcgaat tctaggagaa
     1861 ggtgtatatc attgtacaat ttgcttatag ctttatgttc atgtcaattg aacatgtaac
     1921 ggttttgtta tgagttggta gatattctgg tttc
//
LOCUS       XM_071830899            1254 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840645), mRNA.
ACCESSION   XM_071830899
VERSION     XM_071830899.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1254
                     /gene="LOC139840645"
                     /note="uncharacterized LOC139840645; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840645"
     CDS             88..1254
                     /gene="LOC139840645"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687000.1"
                     /db_xref="GeneID:139840645"
                     /translation="MKRQRKNVDEGPRFKKLAEMQEGMTNLGKSGGVYIPPFTLSRLM
                     SEVQDKNSMEYQRMTWDALRKSINGLVNKVNSTNIKNIIPELVAENLIRGRGLFCRSC
                     MKSQMASPGFTNVFAALVAVVNEMSLNTKFPGVGGLLLRRIILQLQRAYKRNDKHQLL
                     AAVKFIAHLVNQQVVYELIALEILTTLLENLTDDSVEVAVGFVTECGSILQDLSPKGL
                     HGIFERFRGILHDGEIDKRVQFLIEGLFALRKAKFQGYPAVHPDLDLVKPEDQLTHEV
                     SLLDKFDPEITLDIFKLDSNFIKNEKRYEDVKKTILGDESSEDEEKGSDDSDDVDDES
                     SQEEGDDEEKMRIRDETETNIVNLRRTIYLTIMNSLDFEEADHKLAILEVFLIL"
     misc_feature    280..843
                     /gene="LOC139840645"
                     /note="Middle domain of eukaryotic initiation factor 4G
                     (eIF4G); Region: MIF4G; smart00543"
                     /db_xref="CDD:214713"
ORIGIN      
        1 attttattgt tttttcgctc agtaatcaaa tcgtatatat atccccacgc ttgaatttca
       61 acccttcgct gggacattga aaaaataatg aaacgacaaa ggaagaacgt agatgaaggt
      121 ccaaggttca aaaagttggc tgaaatgcaa gaaggaatga ctaatttagg gaagagcgga
      181 ggtgtttata ttccaccgtt tacgttatct cgtttgatga gcgaggttca agataaaaac
      241 agcatggaat atcaaaggat gacatgggac gcattaagga agagtataaa tgggttagtc
      301 aacaaggtca attccacaaa tatcaagaac attatcccag aattggttgc tgaaaattta
      361 atcagaggaa gaggactatt ttgtcgatct tgtatgaagt cacaaatggc ctctcctggt
      421 tttacgaacg tttttgcagc gctcgttgct gtagtgaatg aaatgtccct gaatacgaag
      481 ttccctggag tgggaggcct tttgctgaga aggattattc tacaactaca aagagcttat
      541 aagcgaaatg acaagcatca attgctagct gctgtaaagt ttatcgccca tttggtgaac
      601 cagcaggtag tttatgagtt aattgctctt gaaatactga caactctttt agagaatcta
      661 actgatgata gtgtggaagt tgcggttggt tttgtgaccg aatgtggctc gatacttcaa
      721 gatctgtctc ccaaaggctt gcatggtatc tttgagcgtt ttcgtgggat tcttcacgat
      781 ggagaaatcg acaaaagggt gcagtttttg attgaaggtc tctttgcgct aagaaaggcc
      841 aagttccagg gatatccggc tgttcatccg gatttggatc tcgttaagcc agaagaccag
      901 ttaacccacg aagtttctct tcttgataag ttcgatccag agattaccct agatattttc
      961 aagttggatt ccaatttcat taagaacgaa aaacgctatg aagatgtgaa gaaaaccatt
     1021 ctcggtgatg aatcttcaga agatgaagaa aagggtagtg acgattccga tgatgtggac
     1081 gatgagtcat cgcaagaaga aggagatgat gaggagaaaa tgaggattcg agatgaaacg
     1141 gaaacaaata tagttaatct caggcggacc atatacctga cgattatgaa tagtctggat
     1201 tttgaagaag cggaccataa acttgcaatc ttggaagtat tcttgatttt atga
//
LOCUS       XM_071830900             908 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tetraspanin-6
            (LOC139840647), mRNA.
ACCESSION   XM_071830900
VERSION     XM_071830900.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..908
                     /gene="LOC139840647"
                     /note="tetraspanin-6; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840647"
     CDS             63..908
                     /gene="LOC139840647"
                     /codon_start=1
                     /product="tetraspanin-6"
                     /protein_id="XP_071687001.1"
                     /db_xref="GeneID:139840647"
                     /translation="MSRFSNTVIGLLNLFTLLASIPIIGGALWIERNSATCESFLQTP
                     LLVIGFIILIVSLVGFIGACFHLAWALWLYLVAMLLLIAALLGFTIFGFIVTGAGGGE
                     GVSGRLYNEYHLEDYSPWLRKKVENPKYWLTIRSCILGSKTCGDIVMWSPVDYLTKDM
                     SPIQSGCCKPPSVCNYEMGMMAQDLDCYKWNNDPSMLCYECDSCKAGVLEDVRRDWRK
                     LSVLNVIMTLLLIGIYCIGCCAFRNTQRAESDHPYGENRMSKVLPRWDFYWWRWWHER
                     RHQLY"
     misc_feature    75..779
                     /gene="LOC139840647"
                     /note="Tetraspanin family; Region: Tetraspanin; pfam00335"
                     /db_xref="CDD:459767"
ORIGIN      
        1 caaacaatgc acccctacta attcattaac actagcactt aaccaaacag aacaaaacaa
       61 tcatgtcaag gtttagcaat actgtaatag gactactaaa tctattcaca ctcttagcat
      121 caataccgat aatcggtggt gccttatgga tcgaaagaaa tagtgccaca tgtgaaagct
      181 tcctccaaac accacttctt gtgatcggct tcataatctt gatcgtatct ttagttggtt
      241 tcatcggtgc ttgcttccac ttggcctggg ctttatggtt gtaccttgta gcgatgttgc
      301 tcttgatcgc agcgttatta ggcttcacga ttttcgggtt catcgtgact ggagcaggcg
      361 gtggcgaagg agtttcagga aggttatata atgagtatca cttggaggat tattcaccat
      421 ggctcagaaa aaaagttgaa aatccaaaat attggttgac tataagaagt tgtattttgg
      481 ggtctaagac ttgtggggat attgttatgt ggtctcctgt tgactatttg actaaagata
      541 tgtctccaat tcagtctgga tgttgcaagc caccaagtgt atgcaactac gagatgggca
      601 tgatggctca agatttagac tgctacaaat ggaacaacga tccaagcatg ttatgctacg
      661 agtgcgactc atgcaaagca ggcgtgctag aggatgtgag gagggattgg cgaaagctct
      721 cggttctcaa cgtaattatg acactacttc taattggcat atattgtatc ggttgttgtg
      781 cctttcgaaa cacacaaaga gccgagagcg accacccata tggtgaaaac agaatgtcta
      841 aagttctacc gcgatgggat ttctattggt ggagatggtg gcatgagaga agacatcagc
      901 tttattag
//
LOCUS       XM_071830902            1583 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides FBD-associated F-box protein
            At3g52670-like (LOC139840649), mRNA.
ACCESSION   XM_071830902
VERSION     XM_071830902.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1583
                     /gene="LOC139840649"
                     /note="FBD-associated F-box protein At3g52670-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139840649"
     CDS             123..1583
                     /gene="LOC139840649"
                     /codon_start=1
                     /product="FBD-associated F-box protein At3g52670-like"
                     /protein_id="XP_071687003.1"
                     /db_xref="GeneID:139840649"
                     /translation="METEGCDRLSSLPDDLINEILSYNDTKHAIKTSILSRRWKNTWK
                     SIKHLSLSSDDVTSLPKFSECVTRVLSSRNNETDLSSVRFSFRGEVSQSLVGSIMDYA
                     FSHNVQKMTIMSLRGRKIEFPASLFISETLKDLSLIGSYGYIKITLSTWNLVGLTTMH
                     LHHVIFSTTTENPDECGGFFSTCPNLKNLTLTYCLINGSNDFTLSHSQLSNLRIENGE
                     WYPVVVNVVTPQLKDLIVVNCRGEVMVSAPELSSLTYECHPDEAHAPKIIDFFQQCRN
                     VQFLMLGLEIVEVLASNVQLVSYLPSPFVKLKCFKIYPTDLRSEEVGQKKINMPTEVK
                     NYLLHASPTATVTIVSRQEVQVLQNAELAQKLMSELQMLVEHEKVSCETFRRTHTDVD
                     VSKEPVRMSCIPEFWNEQFVEIIQCEDTIGEIMLMLAHIQDLLKLLPASSEKDKIETR
                     YPSLHAEASCVIKLLFTNISALNSAFLNLMSHHMRL"
     misc_feature    147..254
                     /gene="LOC139840649"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; Region: F-box_AtFBL13-like; cd22160"
                     /db_xref="CDD:438931"
     misc_feature    order(156..158,168..170,177..182,189..194,204..206,
                     210..215,225..233,237..239)
                     /gene="LOC139840649"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438931"
     misc_feature    588..677
                     /gene="LOC139840649"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    678..746
                     /gene="LOC139840649"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    747..812
                     /gene="LOC139840649"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    852..950
                     /gene="LOC139840649"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
     misc_feature    951..1040
                     /gene="LOC139840649"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275379"
ORIGIN      
        1 aaattcctaa atctgaacct tccgtttctc atcgtttcag tttcaatttg aagattcaat
       61 tccactttgc ggtaaaactt aaggatcctg cggcttcggc ttctaaatct taaatagtga
      121 gaatggagac agaagggtgc gatagactaa gcagcttgcc agacgatctc attaacgaaa
      181 tcctctccta taacgatacc aaacatgcta tcaaaactag tattttgtca cgtagatgga
      241 agaatacatg gaagtcaatt aaacatctat ctttatctag tgatgatgtt acttcattac
      301 ccaaattctc agagtgtgtt actcgtgttt tgtcttcccg caacaatgaa acagatttgt
      361 cgtctgttag atttagtttc cgtggagaag ttagtcaatc attggtcgga tcgattatgg
      421 attatgcgtt ttcgcacaat gttcaaaaga tgactattat gtctttgcgc ggaaggaaga
      481 tcgaattccc tgcttctctt tttatttccg agactctcaa agatctcagt ttgattggat
      541 cttatggtta catcaagatc acattatcaa cttggaactt agtaggttta acaacgatgc
      601 atcttcatca tgtcattttc agtactacta ctgaaaatcc cgatgaatgt ggtgggtttt
      661 tttctacttg cccaaacctg aagaatctta ctctaactta ctgtctaata aatggttcga
      721 atgatttcac cctttctcat tctcaacttt ctaatcttag gattgagaat ggagaatggt
      781 atcctgttgt tgttaatgtg gttacacctc aactgaagga tctgattgtt gtaaattgcc
      841 gaggggaagt tatggtttca gcacctgaat tatcctcatt gacgtatgaa tgtcatccgg
      901 atgaggcaca tgctcctaaa atcattgact tttttcaaca atgccgcaac gtccaatttc
      961 ttatgcttgg attggaaatt gtggaggttc ttgcatcaaa tgtgcagcta gtctcatatc
     1021 taccttctcc atttgttaag ttgaagtgtt tcaagattta tccgacagac ttacgctcgg
     1081 aggaggtagg acaaaagaaa ataaacatgc ctaccgaagt aaaaaactat ctgctacatg
     1141 cttctccaac tgccactgtc acgatagttt cacgtcagga ggtgcaagta ctgcagaatg
     1201 cagaattagc acaaaaatta atgtctgagt tgcagatgct ggtagagcat gagaaagtta
     1261 gttgtgagac ctttagaaga actcatacag atgttgatgt gagtaaagaa cctgtcagga
     1321 tgtcatgtat ccctgagttt tggaatgaac agtttgtgga gatcattcaa tgtgaagata
     1381 cgattggtga aattatgtta atgttggctc atattcaaga cttgctcaag ttgcttccag
     1441 catcatcgga gaaggacaag attgaaacac gatatcctag cttacatgca gaggcctcgt
     1501 gtgttattaa attattattc acaaacatca gtgcattaaa ctctgccttt ttaaatttga
     1561 tgtcgcatca catgaggttg tga
//
LOCUS       XM_071830903            1704 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable pectate lyase 18
            (LOC139840650), mRNA.
ACCESSION   XM_071830903
VERSION     XM_071830903.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1704
                     /gene="LOC139840650"
                     /note="probable pectate lyase 18; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100
                     Proteins"
                     /db_xref="GeneID:139840650"
     CDS             1..1704
                     /gene="LOC139840650"
                     /codon_start=1
                     /product="probable pectate lyase 18"
                     /protein_id="XP_071687004.1"
                     /db_xref="GeneID:139840650"
                     /translation="MSLSKCTNLVIYMLFTSLSFTLAFIPHQHPDPEAIVLQLQRKVN
                     ESITSRRRLIETNTIFAQSKDLTPCQTGNPVDDCWRCDPNWANDRQRLADCAIGFGQG
                     AMGGKGGRTYVVTDPSDGDPTNPTPGTLRHAVIQSEPLWIIFANDMHINLKNELIVSS
                     SKTIDGRGAIVHVTGKGCIVIENVGNIIIHGLYVHDCEPSDKAKIRVSPTDVVGRGKS
                     DGDGLTIRGVRNLWIDHCSFARCTDGLVDITEGSTAVTVTNSYFTEHDKVMLLGHSDD
                     YLADAGMQVTVAFNHFGKGLVERMPRCRHGYFHVVNNDYTEWQLYAIGGSAAPTINCQ
                     GNRFVAMPNAHKEVTKRMETKGDEWKGWNWRSDGDLMVNGAFFVPSGDLYSVQYAKAS
                     SVPPMSAYLINQLTMHAGVLLGAPTEITPPGGGPVITPPVDGQPNNGNPNIPPGTIPP
                     PDDGSNGYNPGMMPPGGGGCIPGNGQGGGGDPGMIPGLGGGGGGGYGYSQGSPPPMVL
                     QGCGPGIIPYCGGPGSRRISGGSGSIQTMAHSSMLVTIFLFSFLVLSLQHYSSVLLPL
                     Y"
     misc_feature    439..1020
                     /gene="LOC139840650"
                     /note="Amb_all domain; Region: Amb_all; smart00656"
                     /db_xref="CDD:214765"
ORIGIN      
        1 atgtctctaa gtaaatgcac taatctcgta atctacatgc tttttacatc tctatccttt
       61 acattggcat ttatacctca tcaacatcct gatcctgaag ccattgttct gcaactacaa
      121 aggaaagtaa atgagtcaat cacctccaga agacgattaa ttgaaacaaa cacgattttc
      181 gctcaatcaa aagatctaac tccttgtcag acaggaaacc cggttgacga ttgttggcga
      241 tgcgacccga attgggccaa tgaccgtcaa cgtctagccg attgtgccat tggatttggc
      301 cagggtgcaa tgggtggcaa aggaggccgt acctacgtcg tcactgaccc atctgacggt
      361 gacccaacca acccgactcc aggtacatta cgacacgctg tcatacaatc cgagccttta
      421 tggatcatat tcgccaacga catgcacata aatctaaaaa acgagctcat cgtcagcagc
      481 tcaaaaacaa tcgatggccg tggagccatt gtgcacgtga cagggaaagg gtgcattgtg
      541 atcgagaacg ttggaaacat catcattcac gggctttacg ttcacgattg tgaaccgtcc
      601 gataaggcta agatacgggt gagtccaact gatgttgtcg gaagagggaa atcggatggt
      661 gacggtttga cgatcagggg ggtaaggaat ttgtggattg accattgttc ttttgccagg
      721 tgtacggacg gattagtgga tataacggaa ggatcaaccg ccgtgacagt aaccaattcg
      781 tatttcactg agcatgataa ggtcatgtta ttaggtcatt ctgatgacta tttagccgat
      841 gccggtatgc aggtgacagt agcgttcaat cactttggaa aagggctcgt cgagaggatg
      901 cctagatgcc gacatgggta ttttcatgtt gttaacaacg attataccga atggcagttg
      961 tatgccattg gtgggagcgc agctcccacc attaactgtc aaggaaatag atttgttgca
     1021 atgcctaatg ctcacaaaga ggtgacgaag agaatggaga cgaagggtga tgaatggaag
     1081 gggtggaatt ggaggtcaga tggagacttg atggttaacg gtgcattttt cgtgccttcg
     1141 ggtgatttgt acagcgttca gtacgcaaag gcttctagtg tcccaccgat gtcagcatac
     1201 ctcataaacc aactaactat gcatgcaggt gtcctcttag gtgctccgac tgagattaca
     1261 ccacctggtg gtggtcctgt gatcacacca ccagttgatg gtcaaccaaa taatggtaac
     1321 cctaacattc ctccaggaac cataccacca cctgatgacg gcagcaatgg ctacaatcca
     1381 ggtatgatgc cgccaggtgg tggaggttgt attccaggga acggacaagg tggtggtggt
     1441 gatcctggga tgattccagg ccttggcggt ggtggtggtg gtggttatgg gtattcacaa
     1501 ggatcaccgc ctcctatggt gctacaaggt tgtgggcccg ggataatacc ttattgtggt
     1561 ggtcctggca gtagaagaat ttcaggtgga tctggaagca ttcaaacaat ggcacactca
     1621 tcaatgctag tcaccatctt tctgttttca ttccttgtat tatcacttca acattactct
     1681 agtgttctac ttccattata ttaa
//
LOCUS       XM_071830904            1179 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840651), mRNA.
ACCESSION   XM_071830904
VERSION     XM_071830904.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1179
                     /gene="LOC139840651"
                     /note="uncharacterized LOC139840651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840651"
     CDS             1..1179
                     /gene="LOC139840651"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687005.1"
                     /db_xref="GeneID:139840651"
                     /translation="MELKIATWNIRGANTIDKQNEVRNLIQKEHLCMCAVLETHLKTK
                     TVTDVSNYMFGNWEWISNVDYSPSSCRMVIGWDPNKVRVMVVHMAKQVTRCLVETVVD
                     RSKMFCSFVYANNNGNERRMLWSDLYGHKLISRSHPWVLLGDFNVILKVHEHSAGGSY
                     MTKDMIEFQDCVNKLEVEDICKSGFQFTWTKSLKNPNCDVLKKLDRVMANEDFIKQFG
                     SAHAVFLPYLISDHSPSILTIPEGLVFKPKAFRFMNYTADKDDFIPVVEKGWQLEVIG
                     HHMYRVVRKLKALKKNLNKLNWKNGNVFSRVVDLKEKLSQIQASVDSNPFNKELKADA
                     VKILEEYKVACSDELKVLKKKVRLKWLMDGDKNSKYFHSVLKARKNKSRVESICNDQG
                     "
     misc_feature    13..717
                     /gene="LOC139840651"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(25..27,112..114,334..336,430..432,436..438,613..615,
                     691..696)
                     /gene="LOC139840651"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(112..114,691..693)
                     /gene="LOC139840651"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(334..336,436..438,694..696)
                     /gene="LOC139840651"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atggagttga aaatagcaac atggaatatt aggggtgcta atactattga taagcagaat
       61 gaggttagga atttaattca gaaagagcat ttatgtatgt gtgcagtttt ggaaacacac
      121 cttaaaacta agactgttac tgatgttagt aattatatgt ttggtaattg ggaatggatt
      181 tccaatgtgg attacagtcc atctagttgt agaatggtga ttggatggga tcctaataaa
      241 gttagggtta tggtagttca tatggctaaa caagttactc ggtgtttagt ggaaactgta
      301 gtggatagga gtaagatgtt ttgcagtttt gtatatgcta acaataatgg gaatgaaaga
      361 agaatgcttt ggtctgattt atatggtcat aagctaattt ctagaagtca cccttgggtt
      421 cttcttggag atttcaatgt tattctaaaa gtgcatgagc atagtgctgg tggttcctac
      481 atgactaaag atatgataga attccaggat tgtgttaata aacttgaagt ggaagacata
      541 tgcaagtcag ggtttcaatt tacatggact aagtcattga aaaacccaaa ttgtgatgtc
      601 cttaagaaac tagatagggt tatggcaaat gaggatttta ttaagcaatt tggtagtgct
      661 catgcagttt tccttcctta tttgatttct gaccatagtc cttccatttt aactatacct
      721 gaggggttag tgttcaaacc taaagctttc agattcatga attatactgc agataaggat
      781 gatttcattc cagttgtgga aaaagggtgg caattagaag tgattggaca tcatatgtat
      841 agggttgtta gaaagctgaa ggctttgaaa aagaatttaa acaaactcaa ttggaagaat
      901 ggtaatgtat tttcaagagt ggttgatcta aaagaaaaat tatctcaaat tcaggcttct
      961 gttgattcca atccatttaa taaagagtta aaggcagatg ctgttaagat attggaggag
     1021 tataaagttg cttgcagtga tgagttgaaa gttttaaaga aaaaagttag gcttaaatgg
     1081 ctcatggatg gtgataaaaa ctctaaatac tttcatagtg ttttaaaagc aaggaaaaat
     1141 aaaagtagag tagagagcat ttgtaatgat caggggtaa
//
LOCUS       XM_071830905            1989 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840652), mRNA.
ACCESSION   XM_071830905
VERSION     XM_071830905.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1989
                     /gene="LOC139840652"
                     /note="uncharacterized LOC139840652; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840652"
     CDS             1..1989
                     /gene="LOC139840652"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687006.1"
                     /db_xref="GeneID:139840652"
                     /translation="MDGEEEGNPHGNPPPVVNEVVENDPNDTPMWNVRMVAQTVVPPA
                     ITKPPIEAENWKIEGNFFTMFKDRLFRGLIDENPFDHNQYFNDICDIYKNKDVTEDAF
                     KLRAFPFTLDGEAKAWLRNLPSDSIRSFQDLNEAFINHFFPPSKVERLRMEINGFTQR
                     GDESLYDARFKKLLRACPPHGLTKKEYINTFYRGTNFQTKQYLDSSSGGVFMYNSPNA
                     AKKLLEDIAVNTYEWAPSPRDLMRKNVAQVESEDGQVTLASLNNQFQLYGKELKKIQQ
                     TLVAMQVGCQRCEGPHLTKNCPQVNQCTHIDLDDIPMNSEAHVNFVSNQNFQRGGTSN
                     QGNNSFQSNNSYYNPNQKQEEIKVSNEKGKEKGDATEVNGNDAEGDNEKGKDKGKESS
                     KVTRPVPYPKALRKDKLAAQYKKFQDMMKNVSVNLLITDVLKGMPNYGRFIKELISQK
                     GKYHEETSFFIKEECNKILASRPRIPKKLGDLGKFVFPCKFGESEVFNALADLGASIN
                     LMPHSLYERLGLGPLKPTKIRIRLANHSFDTAIGITEDILVSIDSLVFSVDFVIMEMK
                     EDLQVPLILGRPFLATADTIILVQRNQLNIRVGDERVTINIREAMKQPSNTDDDECYA
                     LDHIDLYVNEELEKLLGVDTSGFNQVFESDIMDLEADF"
     misc_feature    313..582
                     /gene="LOC139840652"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
     misc_feature    1459..1743
                     /gene="LOC139840652"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1504..1506,1510..1512,1516..1518,1588..1596,
                     1720..1722)
                     /gene="LOC139840652"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1504..1512
                     /gene="LOC139840652"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1504..1506
                     /gene="LOC139840652"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1588..1599,1609..1620)
                     /gene="LOC139840652"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggacggag aagaagaggg taatccacat ggtaatcctc caccggttgt taatgaagta
       61 gttgaaaatg atccaaatga cactccgatg tggaatgtta gaatggtggc acaaacggtt
      121 gttcctccgg ctatcacaaa accaccaatc gaagcagaaa attggaagat cgagggtaac
      181 tttttcacaa tgttcaagga tagacttttt cgcgggctta tagatgaaaa cccttttgat
      241 cacaatcaat attttaatga tatttgtgat atctacaaga acaaagatgt caccgaagat
      301 gcttttaagc taagggcatt cccattcacg cttgatggag aagctaaggc ttggttaagg
      361 aacttgccat cggattcgat taggtctttt caagatttga atgaagcatt tatcaatcac
      421 tttttcccac cttcaaaggt ggagcgttta agaatggaaa ttaatgggtt cacgcaaaga
      481 ggagatgagt ctttgtatga tgcgcgtttc aagaagctat taagagcttg cccaccgcat
      541 ggtctaacca agaaggagta catcaatacg ttctaccggg gtaccaattt tcaaactaag
      601 caatatcttg attcatcttc gggtggagtg tttatgtaca actcacccaa tgcggccaaa
      661 aagttactag aggacatcgc ggttaataca tatgaatggg caccttcacc aagagatttg
      721 atgagaaaga atgtagctca agtggagagt gaagatgggc aagttacctt ggcaagcttg
      781 aataaccaat ttcaattata tgggaaagaa ttgaaaaaga tacaacaaac gctagtggct
      841 atgcaagtcg gttgtcaaag gtgtgaagga ccacacctca ccaaaaattg tccccaagtc
      901 aatcaatgta ctcacattga cttggatgac attcctatga attcggaagc tcatgtgaac
      961 tttgtgagca accaaaactt tcaaagagga ggaacttcta accaaggcaa caactctttc
     1021 caatcgaaca atagctacta caaccctaac caaaagcaag aagaaatcaa ggttagtaat
     1081 gagaagggta aagaaaaggg tgatgcaacc gaggtcaatg gtaatgatgc tgagggtgac
     1141 aatgaaaagg gtaaggataa gggtaaagag tcttcgaagg tcacaaggcc tgttccatat
     1201 ccaaaagctt taaggaagga caagttggca gctcaatata aaaagttcca agacatgatg
     1261 aagaatgtgt cggtcaactt gcttattacc gatgtgctca aaggaatgcc caactatgga
     1321 cgcttcatca aagagttaat ctctcaaaag ggtaaatatc atgaggaaac gtccttcttt
     1381 atcaaagagg agtgcaacaa gatacttgca tcaaggccaa ggatccctaa aaagttaggt
     1441 gatctgggaa aatttgtttt cccatgcaag tttggtgaat cggaagtgtt caatgcacta
     1501 gcagacttgg gagcaagcat taacttaatg ccccactcac tttatgaaag acttggcctt
     1561 ggacctctca aaccaaccaa aattcgtata agattggcca accattcatt tgacaccgca
     1621 attggaatca ccgaggacat cttggttagc attgactcct tggtgttctc ggttgatttt
     1681 gttatcatgg agatgaagga ggaccttcaa gtccccctca tcttaggtag accatttctt
     1741 gccaccgccg acaccatcat cttagtacaa cgcaaccaac tcaacattag agttggcgat
     1801 gagcgtgtga ccataaacat tcgggaagct atgaagcaac caagcaacac cgatgatgac
     1861 gagtgttatg ccctagacca tatagacctt tatgtgaatg aagagcttga aaagctcttg
     1921 ggggttgata cttcgggatt taaccaagtt tttgaaagtg atattatgga cttagaagcc
     1981 gatttttaa
//
LOCUS       XM_071830906             339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cyclin-dependent protein
            kinase inhibitor SMR2-like (LOC139840654), mRNA.
ACCESSION   XM_071830906
VERSION     XM_071830906.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..339
                     /gene="LOC139840654"
                     /note="cyclin-dependent protein kinase inhibitor
                     SMR2-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840654"
     CDS             1..339
                     /gene="LOC139840654"
                     /codon_start=1
                     /product="cyclin-dependent protein kinase inhibitor
                     SMR2-like"
                     /protein_id="XP_071687007.1"
                     /db_xref="GeneID:139840654"
                     /translation="MSTDLQFRQLPAVIHQLPSLKVSISQLQHESSSSSATDSDQSEC
                     STPTSPEHRIPAILTCPPPPKKQRKFIPSCKRRLHRELFFEVVAGDEIDSFFKHSYEL
                     INKNSSKKRK"
     misc_feature    <127..249
                     /gene="LOC139840654"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03031"
                     /db_xref="CDD:215546"
ORIGIN      
        1 atgtccacag atcttcaatt taggcaacta cctgctgtaa ttcatcaatt accttcactc
       61 aaagtttcaa tttcacaatt acaacacgaa tcatcgtcat catccgcaac tgattccgat
      121 caatcggaat gctcaacgcc gacgtcaccg gaacatcgaa ttccggccat tctcacttgt
      181 cctccaccgc ctaaaaaaca acgcaaattc attccgtcgt gtaaacgaag acttcaccgt
      241 gaattgttct ttgaagtcgt tgctggagat gaaattgact ccttcttcaa gcacagctat
      301 gaattaatta ataaaaattc gtctaaaaag cggaagtga
//
LOCUS       XM_071830907            1053 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            phosphatase 7 long form homolog (LOC139840655), mRNA.
ACCESSION   XM_071830907
VERSION     XM_071830907.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1053
                     /gene="LOC139840655"
                     /note="serine/threonine-protein phosphatase 7 long form
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139840655"
     CDS             1..1053
                     /gene="LOC139840655"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /protein_id="XP_071687008.1"
                     /db_xref="GeneID:139840655"
                     /translation="MITLQNVQILWGLPINGDVVLGVWHNKTPDQWSDFAGQYLRIDV
                     PPTKIKSGHILISALYAKLNEPVGDTIRSHQQWARVYLLAALSSFLFPGSNSTSAPLN
                     YVYHLIDFERLSWGSAVLAHVYRNLCCTAEKTDQSDMNVAMLLVQHYLYERIPSLAPR
                     LLRDIVLTSNALLNGPYGVRWCGPKSFEHTPTHVLSTCRSALSMIRPNERGAILFWAT
                     DEMQLPDRVCRQFGWIQNIPPSDLLWTPQQHHAIHGTTLRSRANADIRLTNPQVDYIS
                     QWYERARRGYIPKLGVGTDTTARYFPWYYARTIVTICVIRRPQPANQYRDWATEENFY
                     VHSHNPFSLRKNPFNY"
     misc_feature    4..912
                     /gene="LOC139840655"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 atgataacgt tgcaaaatgt tcaaatttta tggggtttac ccataaatgg agatgttgtg
       61 ttgggtgtat ggcacaacaa gacgccggat caatggtctg attttgctgg ccaatattta
      121 cgaattgatg ttcctcctac taaaataaaa tcaggacaca tcttaatatc ggctttatac
      181 gcgaagttga atgagcccgt tggtgatact attagatctc accaacaatg ggctagagtt
      241 tatttgttag ctgccttgtc ttcctttcta ttccccggca gtaattccac cagtgctccg
      301 ttaaactatg tgtatcacct catcgacttt gaacgtttga gttggggtag tgcggtgctt
      361 gcacatgtat atagaaattt atgttgtaca gctgaaaaga cagaccaatc agacatgaat
      421 gttgcgatgc ttttagtaca acattatttg tatgaaagaa ttcctagtct tgcgccacgt
      481 cttttgcgcg atatagtctt gacatccaat gctcttttga atgggcctta tggtgtgagg
      541 tggtgtggac caaagagctt cgaacataca cccacacatg tattgagtac gtgtcgctca
      601 gcattgtcga tgatacgtcc taatgagcgt ggcgctattc tattttgggc tacggatgag
      661 atgcagctcc cagatagggt atgcagacag ttcggatgga ttcagaatat tccaccgtcg
      721 gacttgttgt ggacaccgca acagcatcat gccatacacg gcacaaccct acggtcaaga
      781 gcaaatgcgg atataaggct aacgaacccg caagttgact acataagcca gtggtatgaa
      841 cgagctcgga ggggctatat tcctaagttg ggggtgggca cggacacgac tgctcgttac
      901 tttccgtggt actacgcgcg tacaatagtt actatatgtg ttattaggag accacaaccc
      961 gccaaccaat atcgtgattg ggcaaccgaa gagaattttt atgtacactc ccataatcca
     1021 ttttctcttc ggaaaaaccc cttcaactat tga
//
LOCUS       XM_071830909             630 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139840656), mRNA.
ACCESSION   XM_071830909
VERSION     XM_071830909.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..630
                     /gene="LOC139840656"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840656"
     CDS             1..630
                     /gene="LOC139840656"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687010.1"
                     /db_xref="GeneID:139840656"
                     /translation="MVGSCDGLVCVCSYEGEFLVTNPSTREVRKLPMPPLYKDMEEEV
                     PWGFGYDSSTHDYKVVVGFNESEHHTRFQVLSLKSNEWRFIGDGHYSSTRYNTDYSNV
                     GFLYDGTLHCYLQKVWLMKNYNCWQLLPHEYYGADATACILDRFPDNTWRICDDGKGN
                     VYLLERWYHIANPTFVKSLVSPNPTFVKSLVSPNNNTSRLKMDSSSHER"
     misc_feature    4..>282
                     /gene="LOC139840656"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggttggtt cctgtgatgg gcttgtttgt gtatgttcct atgaaggtga gtttttagta
       61 actaatcctt ccactcgaga ggttagaaaa ctgccaatgc cacctcttta caaggacatg
      121 gaagaagaag taccttgggg ttttggttat gattcttcta cccatgatta caaggttgtt
      181 gttggcttta atgaatcaga gcatcatacg cgctttcaag tgttatcttt aaaatcaaat
      241 gaatggagat tcattggaga tggccattat tcttctaccc gttataatac cgattattct
      301 aatgttggtt ttttatatga tgggacactg cattgttatt tacaaaaagt atggttgatg
      361 aaaaactata attgttggca actgctccca catgaatact atggtgctga cgctactgca
      421 tgcatactcg atcgctttcc agacaacacc tggcgtatat gtgatgatgg taaaggaaat
      481 gtatatctat tggagagatg gtatcatatt gcaaatccta catttgtcaa gtcacttgta
      541 tctccaaatc ctacatttgt caagtcactt gtatctccaa ataacaatac gagtcgtcta
      601 aaaatggatt ctagctctca tgaacggtaa
//
LOCUS       XM_071830910            1109 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GDSL esterase/lipase
            At5g03610-like (LOC139840658), mRNA.
ACCESSION   XM_071830910
VERSION     XM_071830910.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1109
                     /gene="LOC139840658"
                     /note="GDSL esterase/lipase At5g03610-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840658"
     CDS             1..1062
                     /gene="LOC139840658"
                     /codon_start=1
                     /product="GDSL esterase/lipase At5g03610-like"
                     /protein_id="XP_071687011.1"
                     /db_xref="GeneID:139840658"
                     /translation="MKHQASLVLIYLFISITNVISYDIFLGSNKRHNQNHNLKLFVFG
                     DSYADTGNWPKSYGGSWHEPYGITFPGSPSGRFSDGRVLTDYIAGILGTKSPITYKGW
                     KSGEKKSTKYGMNFAYGGTGVFNTFVNQPNMTTQVDFFEQFVQQTQLHLNYSSSIAII
                     SLAGNDYATYFTSNHTLEDLPGLTKSVVNQVISNVKRIHELGVRKFAITAMQPLGCLP
                     QFTIRTSFQNCSDTENSVAEFHNQVLTESINKLNNETDDKSIFVILNLYQAFSSALNL
                     QRKSLSTGSSNSNLLEPCCQGVSKGYSCGNVEDGTRILKYRVCENRTDSFFWDMIHPS
                     QQGWHEVSMNLRSSLMQLV"
     misc_feature    118..1035
                     /gene="LOC139840658"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; Region:
                     SGNH_hydrolase; cl01053"
                     /db_xref="CDD:470049"
     misc_feature    order(136..138,358..360,493..495,985..987,994..996)
                     /gene="LOC139840658"
                     /note="active site"
                     /db_xref="CDD:238141"
     misc_feature    order(136..138,985..987,994..996)
                     /gene="LOC139840658"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     misc_feature    order(136..138,358..360,493..495)
                     /gene="LOC139840658"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 atgaaacatc aagcaagtct ggttctcatt tatctcttca tctccataac taatgtaatt
       61 tcctatgata tatttctagg cagcaacaaa aggcataacc agaatcataa tttgaagttg
      121 tttgtgtttg gagattcgta tgctgatact ggaaactggc caaaatcata tggtggttca
      181 tggcatgaac catacggcat tacttttcct ggtagtccct ccggcaggtt ttctgatggt
      241 cgtgtgctca cggattacat agctggcata ttgggtacaa aatctccaat aacatataaa
      301 ggttggaaat ctggtgagaa aaaatcaacc aagtatggga tgaattttgc atatggaggg
      361 acaggtgttt ttaatacatt tgtgaatcaa ccaaacatga ccacccaagt tgactttttt
      421 gaacaatttg ttcaacaaac tcaactccac cttaattatt catcctccat tgcaataatc
      481 tcattagcag gcaatgatta tgcaacttac ttcacatcta atcataccct tgaggacttg
      541 ccaggtttaa caaaatcagt agtcaatcaa gtaatttcta atgtgaaacg aatacacgag
      601 ttgggagttc gtaagtttgc aataactgca atgcaaccac ttgggtgctt gccacaattc
      661 acaatccgta catctttcca gaactgtagc gacacagaga attcggtcgc cgagtttcat
      721 aaccaagtgc taactgaaag catcaataag ctaaacaacg agactgatga caaatcgatt
      781 tttgtaatcc taaatctcta tcaagcattc tcatccgctt taaatctaca acggaaaagc
      841 ctgtccactg ggagttcgaa ttcgaattta ttggaaccat gttgccaagg agtcagtaaa
      901 ggatattcat gtggaaatgt tgaagatggt acgaggatac tgaaatatcg tgtttgcgaa
      961 aatcgaactg actcgttttt ctgggacatg atacaccctt cgcaacaagg ttggcatgag
     1021 gtttctatga atttacgctc ttctctcatg caacttgttt aagttggata atttattatt
     1081 gtttttttga actaatgata catatgtgt
//
LOCUS       XM_071830911            1149 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840659), mRNA.
ACCESSION   XM_071830911
VERSION     XM_071830911.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1149
                     /gene="LOC139840659"
                     /note="uncharacterized LOC139840659; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840659"
     CDS             1..1149
                     /gene="LOC139840659"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687012.1"
                     /db_xref="GeneID:139840659"
                     /translation="MSMLELITKASATSNQLTSDSQYPIVLNTDPILLNLKPKTNYSF
                     VNRVDGWKISDNDAQVIELGQKFYKNLKIKLKNPKSFTKVEFISMLNLYLEKIRESAE
                     ISIGVEPKDEVYSKVFIQKFGFLIGEAVLGLVIEACFVFEIWEILKTLIVGGLVNSSC
                     FKDFVGNLIEKRRADLVCLSVKYVSDLQVSDIISVMRFFLCPPKDGYSSMVDVRKEWE
                     RKAVSAIETAGDKSAGEKKLTLAKDAAVLLMMAHDEFTTSELCLHHLIASSNVDDVIL
                     SACIGKLNGSEIMSFVRYLKKWLVKYLKFPHAYLSSKSLPKAVELVPSLENVTKCFGF
                     VIDEHFSSLVLHPEFCEEVKSVEFVVSSLASEARICCSLANFCASLKI"
ORIGIN      
        1 atgtctatgc tcgaattaat caccaaagct tcagctacat ccaaccagct aacttcagat
       61 tcacaatatc ccatagttct taatacagat cctattctgc tcaatttaaa acctaaaact
      121 aactattcat tcgttaatcg tgtcgatggc tggaaaattt ccgataatga tgcacaagtt
      181 atagagctag ggcaaaagtt ttataagaac ttgaaaatta agcttaagaa ccctaagtca
      241 tttactaagg ttgaatttat tagcatgttg aatctgtacc tggagaagat tagggagagt
      301 gccgaaattt cgattggtgt tgaacccaaa gatgaggttt atagtaaggt gtttatacag
      361 aaatttggat ttctgatagg cgaagcggtt ttaggtttgg taattgaggc ttgttttgtg
      421 tttgaaattt gggagatttt aaaaactttg attgttggtg gattggttaa tagttcatgt
      481 tttaaggatt ttgtaggtaa tttgatcgag aaacgtaggg cggatttggt ttgtttaagt
      541 gttaagtatg tttcggatct tcaagtttct gacataattt cggttatgag attctttctt
      601 tgtccaccga aagatggata tagtagcatg gttgatgtga ggaaagagtg ggagaggaaa
      661 gcggtttcag ctattgaaac ggccggtgat aaaagtgctg gcgagaagaa attgactttg
      721 gcgaaagatg cagcggtttt gctcatgatg gctcatgatg agtttacgac tagtgaattg
      781 tgtttgcatc atttgatcgc gtcatcaaat gttgatgatg tgatattatc tgcttgtatt
      841 gggaagttga atggatcgga gattatgagt tttgtgcgtt atttgaagaa gtggttggtt
      901 aagtatctga aatttccgca tgcgtatttg agtagtaaaa gtttgccaaa agcagtcgag
      961 ttggttcctt cacttgaaaa tgtcaccaag tgttttgggt ttgtaattga cgaacatttt
     1021 tcgtcactgg tgttgcatcc agagttttgt gaagaggtaa aatctgttga atttgttgtg
     1081 agttctttgg catcagaagc taggatttgt tgtagtttgg ccaacttttg cgcaagtttg
     1141 aagatttaa
//
LOCUS       XM_071830912            1533 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-glucosyltransferase
            29-like (LOC139840660), mRNA.
ACCESSION   XM_071830912
VERSION     XM_071830912.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1533
                     /gene="LOC139840660"
                     /note="UDP-glucosyltransferase 29-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139840660"
     CDS             1..1533
                     /gene="LOC139840660"
                     /codon_start=1
                     /product="UDP-glucosyltransferase 29-like"
                     /protein_id="XP_071687013.1"
                     /db_xref="GeneID:139840660"
                     /translation="MIKNGYGGKKQTVLMFPWLGHGHISPFLELAKKLTNTNRFNIHL
                     CSTPTNLDSIKKTCPPSVNLIELHLPTLPDLPPHLHTTNGLPLQLMSTLKQAFDMASP
                     RFSDILINLKPDLLIYDIIQPWAPIAAAGLGIPSVVFITTSASASMVHFQLGTSKNIP
                     FPFSSTFYYHPYEDGHVSKRTVNKEADRVTECVQSSSSIVLVKSCKEIEAKYAHHLSR
                     LIDKRVVPVGPLVAEPPKLETKQNNVIDWLDTKSVGSTVFVSFGSEYFLSNADLAEIA
                     YGLEMSNVNFIWVLRFPKGENRTIDEALPQGFIERVKSRGLVMDGWAPQARILGHKNI
                     GGFVSHCGWNSVLEAMKFGVPVIAMPMHLDQPINARLAVAVGVGVEVVRDDNGKLKRE
                     TISSVLKRVVMSELGNVVRENAKKLGDDLRVKKDEEIDVVTKELIKLCKSAKKLEKIK
                     IEKIKSEVILTNKLQKTKSESFGGDDGVRDGVRGGGTNKLQKTKSEAFAICALHAMKG
                     GV"
     misc_feature    22..1257
                     /gene="LOC139840660"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(64..69,73..75,490..492,499..504,514..516,613..615,
                     787..789,1018..1020,1024..1026,1030..1035,1042..1044)
                     /gene="LOC139840660"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(64..66,787..789,1018..1020,1024..1026,1030..1035)
                     /gene="LOC139840660"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    67..69
                     /gene="LOC139840660"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 atgattaaga acggttatgg aggaaaaaaa caaacggttt taatgtttcc atggttaggc
       61 catggtcaca tttcaccttt cttagaacta gccaaaaaac taaccaacac caaccgcttt
      121 aacatccacc tttgttcgac tccaactaac ctggattcga tcaagaaaac gtgtccgcca
      181 tcggttaatc tcatcgagct tcatcttcct acgttaccgg accttccacc acaccttcac
      241 accacaaatg gcttacctct ccaacttatg tccactctca aacaagcttt tgacatggcg
      301 agccctaggt tttcagacat cttgattaac cttaaacctg atctgctaat ctacgacatt
      361 attcaaccgt gggcccctat cgctgcagcc ggtttaggta tcccatctgt ggtgtttatc
      421 accactagtg cctctgcatc catggttcac tttcaactag gcacctctaa aaacatcccg
      481 tttccgtttt cttcgacttt ttactatcat ccctatgaag atgggcatgt ttcgaagaga
      541 acggttaaca aggaggctga tcgtgtgact gaatgtgtcc aaagctcgtc aagtatcgtt
      601 cttgttaagt catgtaagga gattgaagct aagtatgctc atcatctttc tcgtttgatc
      661 gataaacgtg tcgtgccggt tggtccactt gtggcagaac cacctaaact ggagacgaaa
      721 cagaacaatg tgatcgactg gctagacaca aaatctgtgg ggtccactgt tttcgtgtcg
      781 tttgggagcg agtattttct ttctaatgct gatttggcgg aaatagcata tgggttggaa
      841 atgagtaatg tgaattttat ttgggtttta aggtttccaa aaggtgaaaa cagaacaatt
      901 gatgaagctt tgccacaagg gtttattgaa agggttaaaa gtaggggttt agttatggat
      961 gggtgggctc cacaagcaag aattttggga cacaaaaaca taggtgggtt tgtgagtcat
     1021 tgtggttgga attcggttct tgaagctatg aaatttggtg ttccagttat agctatgcca
     1081 atgcatcttg accaaccgat taatgcgcgg ttggctgtgg ctgttggtgt tggtgtggag
     1141 gttgttaggg acgataatgg gaagctaaag cgggagacga tatcatcagt tttaaaacgt
     1201 gtggtgatga gcgagttagg gaatgttgtg agggaaaacg cgaagaaatt gggtgatgat
     1261 ttacgggtta aaaaagatga agaaattgat gtggtaacta aagagttgat taagctatgc
     1321 aaaagtgcta agaagcttga aaagatcaaa attgaaaaga tcaaaagtga agttattctt
     1381 accaacaaac tccaaaagac gaaaagtgaa tcatttggtg gtgacgatgg tgttcgtgat
     1441 ggtgtccgtg gtggcggtac gaacaaactt cagaagacga aaagtgaagc atttgcgatt
     1501 tgtgctcttc atgctatgaa gggtggagtt tga
//
LOCUS       XM_071830913             339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840661), mRNA.
ACCESSION   XM_071830913
VERSION     XM_071830913.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..339
                     /gene="LOC139840661"
                     /note="uncharacterized LOC139840661; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840661"
     CDS             1..339
                     /gene="LOC139840661"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687014.1"
                     /db_xref="GeneID:139840661"
                     /translation="MGNFMEACIQKKQTEEKPQILQMVEQEKEEYVKTRSSYGMESGK
                     MRVKLVLAKDELEWLLLQLKNTKGKRLEDVLSEIEKSRMNGKSTVAGWKPSLESIMET
                     PEVHHEMNRS"
ORIGIN      
        1 atgggaaatt ttatggaagc atgcatacaa aagaaacaaa cagaggaaaa gccacaaata
       61 ctgcagatgg tggaacaaga aaaagaagaa tatgtgaaaa caaggagtag ttatggaatg
      121 gagagcggta aaatgagggt aaaattggta ttagcaaaag atgaacttga gtggctgtta
      181 ttgcagttga agaacacaaa aggtaaaaga ttagaagatg ttttgagtga aattgaaaag
      241 agtagaatga atgggaaaag taccgttgca ggatggaaac cttctttaga aagtattatg
      301 gagacccctg aggttcatca tgagatgaac agatcatga
//
LOCUS       XM_071830914             522 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00310-like (LOC139840662), mRNA.
ACCESSION   XM_071830914
VERSION     XM_071830914.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..522
                     /gene="LOC139840662"
                     /note="uncharacterized mitochondrial protein
                     AtMg00310-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840662"
     CDS             1..522
                     /gene="LOC139840662"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00310-like"
                     /protein_id="XP_071687015.1"
                     /db_xref="GeneID:139840662"
                     /translation="MTFFLGGNYNDKKISWVKWKNVLLPFDAGGLNIGFLLYKNLALL
                     GKWRWRFHTEPQSLWAKVIMSLYGPNGGFDVESSHRLFSSYTTWKEIVFVGKYLDNMG
                     IPFSSSFVKIVGNGSSVSFWEDKWIGDGKLKDTFNRLYQLEAIKTASVQERVSRRGPE
                     VTGQWNWVRPPSG"
ORIGIN      
        1 atgacttttt ttttgggcgg gaactataat gacaaaaaga tttcatgggt aaaatggaaa
       61 aatgttcttt tgccgtttga tgcgggaggc ctaaacattg ggtttctatt gtataaaaat
      121 cttgctttat tagggaaatg gagatggcgg tttcataccg aacctcaatc attatgggcc
      181 aaagtcatta tgagcttata tggtccaaat ggtgggtttg atgtggaatc ctctcatcgc
      241 cttttctctt cttatactac gtggaaggaa attgtttttg tgggcaaata cttggataat
      301 atgggcatac ccttcagctc atctttcgtg aaaattgtgg gaaacggatc gagtgtgtcc
      361 ttctgggaag acaaatggat aggtgatgga aagctaaaag acacattcaa caggctgtac
      421 caactggaag caataaagac ggcatcagtt caagaaagag tgtcgagacg cggacctgaa
      481 gtaacagggc agtggaactg ggttcgtccc ccttcaggat ga
//
LOCUS       XM_071830915             357 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840663), mRNA.
ACCESSION   XM_071830915
VERSION     XM_071830915.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..357
                     /gene="LOC139840663"
                     /note="uncharacterized LOC139840663; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840663"
     CDS             1..357
                     /gene="LOC139840663"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687016.1"
                     /db_xref="GeneID:139840663"
                     /translation="MKILLCFERASGLRINFQKSSIIGVGVKDQEVQNVAARFKCQME
                     KLPFTYLGITIGSNMKKSKDWKLVIEKFNSRLSEWKARAISFGGRLTLVKSVLNSLPL
                     YFFSQSIVLRRASLTN"
     misc_feature    <1..165
                     /gene="LOC139840663"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgaagattt tgttgtgttt cgaacgagct tcagggcttc gaattaactt tcaaaaaagc
       61 tcgattatag gtgttggggt aaaagatcag gaggtccaaa atgttgcagc tcggtttaaa
      121 tgtcagatgg aaaaacttcc atttacctat cttgggataa ctatcgggtc taatatgaaa
      181 aaatcaaaag attggaagct cgtaatcgaa aaattcaact cgagattatc ggagtggaaa
      241 gcaagggcga tttcttttgg tggaagattg accttagtga agtcggtttt gaatagtcta
      301 ccattgtatt ttttttctca atctatcgtg ctccgtcgtg cgtcattaac gaattag
//
LOCUS       XM_071830916             823 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840664), mRNA.
ACCESSION   XM_071830916
VERSION     XM_071830916.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..823
                     /gene="LOC139840664"
                     /note="uncharacterized LOC139840664; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840664"
     CDS             1..750
                     /gene="LOC139840664"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687017.1"
                     /db_xref="GeneID:139840664"
                     /translation="MAPKRRRTTDNQTQKNSTSRSSVSTRSRNSKLKININDNDNNNC
                     TINNSPVVVFAHGAGAPSSSDWMIRWKNLLTDALNAVEVVTFDYPYISKRKPPPKAEK
                     LVEFHSDFVKKIVAKYPEHPLILVGKSMGSRVSCMVAAENDIEVSAVVCLGYPLKGTQ
                     GAIRDGPLLQLEVPTMFVQGTKDGLCLLASLEQVMKKMKGMSALHVVENGDHSFKIGK
                     KNLELIGITQEEAEQCAVKAIATFVSQIIGA"
     misc_feature    148..744
                     /gene="LOC139840664"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]; Region: COG3571"
                     /db_xref="CDD:442792"
ORIGIN      
        1 atggctccta aacgccggcg aacgacggat aaccaaaccc aaaaaaattc gacaagtcgt
       61 tcttcagtgt ccacaaggtc tcggaattca aaattgaaga ttaatattaa tgacaatgac
      121 aataataatt gtactatcaa taattcgccg gtggttgttt ttgctcatgg cgccggtgct
      181 ccttcgtctt ccgattggat gattagatgg aagaacttgt taactgatgc actaaatgct
      241 gttgaagttg ttacttttga ctacccatac atttctaaac gaaagcctcc accgaaagct
      301 gaaaaactgg ttgagtttca ctcggatttc gtcaaaaaga ttgttgccaa gtatccagaa
      361 catcccctca ttttggttgg aaaatcaatg ggttcaagag tgagttgtat ggtagctgct
      421 gagaatgata ttgaggtttc tgctgtcgta tgcttaggct accctctaaa gggcacacaa
      481 ggagctatta gagatggacc cctcttgcag cttgaggttc ctactatgtt tgtacagggg
      541 accaaagacg ggctctgttt gttggcgtca ttggaacaag ttatgaagaa gatgaagggt
      601 atgagtgcac tacatgtggt tgaaaacggt gatcactcgt tcaagattgg aaaaaagaat
      661 cttgagttga tcggaatcac gcaagaagaa gctgaacaat gtgctgttaa agcaattgca
      721 acgtttgtct cccaaatcat cggtgcatga tagtcactca cttatgctct ttaagtaact
      781 tcgtgtgagc tgtatgtcgc attttttgac ttgaattatt aca
//
LOCUS       XM_071830917             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139840665), mRNA.
ACCESSION   XM_071830917
VERSION     XM_071830917.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139840665"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139840665"
     CDS             1..441
                     /gene="LOC139840665"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687018.1"
                     /db_xref="GeneID:139840665"
                     /translation="MTCTRPYIAYAVGKLSRFTSNSGSHHWQAVNRVFKYLKQTKDFG
                     ITYTGFSSILEGYSDASWITNMEDHSSTTGWIFLLGGGAISWASKKQTYITNSTMESE
                     FVALAAAGNEAEWLRNLVYEIPLWPKIISPIGMHCDSASTVAKA"
     misc_feature    163..>438
                     /gene="LOC139840665"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(175..186,289..297,304..306,412..414)
                     /gene="LOC139840665"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgacttgca ctagaccgta tattgcctat gcggtgggta aattgagtag atttactagt
       61 aactcgggtt ctcaccattg gcaagctgtg aatagagtat ttaagtactt gaagcaaacc
      121 aaggactttg gtatcacata taccggtttt tcttctattc tagaaggtta ttcggatgca
      181 agttggataa ccaatatgga agatcattct tctactactg gttggatatt cctacttggt
      241 ggaggggcaa tttcatgggc ttccaagaaa caaacatata ttacaaattc gacaatggag
      301 tcggaatttg ttgcattggc tgcggcgggt aatgaagccg agtggttaag gaatttggta
      361 tatgaaattc ctttatggcc aaagatcatt tctcctattg gtatgcattg tgatagtgct
      421 tcaacggtgg ctaaggctta a
//
LOCUS       XM_071830918            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840666), mRNA.
ACCESSION   XM_071830918
VERSION     XM_071830918.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139840666"
                     /note="uncharacterized LOC139840666; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840666"
     CDS             1..1077
                     /gene="LOC139840666"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687019.1"
                     /db_xref="GeneID:139840666"
                     /translation="MVFWAPAIAAGISNVFPEVFHALCDRHLLGNLKSVSKRVKSYEW
                     HYWKMCKAYRKSDFDHHYAILARRIPDSARTLTTVGLNRWSRHHADRVRYAYLTSNSA
                     ESMNALSVHARKLPITMLLEFFRASVQQWFWEHRNTADGLTTPVTPYAEHKLGKRNRK
                     SISWTVKPISQVKFEVLDMKKGGKVNLQDKTCTCKQWQFSGIPCGHVMAVARYFVLRN
                     VTTHVQKYFHTETYKSAYMEDINPLDHISEWIDPGHLQTVLPPLVTKRQSGRPKSTAR
                     IPSQGEDKDNFKSKRKCSRCLEYGHTRSTCTAHYDLSEGKQKSKCNSKTKAKPKGLVK
                     GKGKGKREDSCSTQFGSTYNLSDD"
     misc_feature    568..648
                     /gene="LOC139840666"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atggtttttt gggcacctgc aatagctgct ggcatatcaa acgtatttcc agaagtattt
       61 catgcactat gtgatagaca tttgttggga aacctcaaaa gtgtgtctaa aagggttaaa
      121 agttacgagt ggcactactg gaaaatgtgc aaagcgtata gaaaatctga ttttgatcac
      181 cactatgcta tactagcacg acgtatccca gacagtgcac gtacactcac tactgttggc
      241 ctcaacagat ggtctagaca tcatgcagat cgtgttcggt atgcttacct aacttctaat
      301 agtgcagagt caatgaacgc actgtcagtt catgcgagga aactcccgat tacaatgctt
      361 cttgaattct ttagagcttc agttcaacaa tggttttggg aacaccgaaa cactgctgat
      421 ggtttaacaa cacctgtcac accatatgca gagcataagc ttggtaaaag aaatcgtaag
      481 tctattagtt ggactgtcaa accgatatca caagttaagt ttgaggtatt ggatatgaaa
      541 aaaggcggta aagtcaatct acaagataaa acttgcacat gtaaacaatg gcagttttcc
      601 ggtataccct gcggacatgt aatggcagta gcaaggtatt ttgtcctacg taacgttact
      661 acacacgttc agaagtattt ccacactgaa acgtacaagt cggcatacat ggaagatatt
      721 aacccgctag atcatatttc tgaatggata gatccaggac acctacaaac cgtcctaccg
      781 ccattggtta caaagcgaca atcgggtaga ccgaagagta ctgctcgtat accgtcccaa
      841 ggagaggaca aagacaattt caaatctaaa agaaaatgca gtcgttgctt ggaatatgga
      901 catactagat caacttgcac cgcacattat gatctttctg aaggtaaaca aaagtccaag
      961 tgtaactcaa aaacaaaggc aaagccgaag gggttggtaa agggcaaggg taaaggaaaa
     1021 cgtgaagact catgctcaac acaatttggc tccacttaca atttgagtga tgattag
//
LOCUS       XM_071830919            2436 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cation/H(+) antiporter
            18-like (LOC139840667), mRNA.
ACCESSION   XM_071830919
VERSION     XM_071830919.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2436
                     /gene="LOC139840667"
                     /note="cation/H(+) antiporter 18-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139840667"
     CDS             1..2436
                     /gene="LOC139840667"
                     /codon_start=1
                     /product="cation/H(+) antiporter 18-like"
                     /protein_id="XP_071687020.1"
                     /db_xref="GeneID:139840667"
                     /translation="MASKNETPDCLPPMKATSHGVFQGDTPLHSALSLVILQMVLVIT
                     FTRVLAYLMKPLRQPRVVAEIVGGVLLGPSALGRNKAFLHAVFPPRSLTVLDTLANLG
                     LLFFLFLVGLELDLNSLRRTGKKALCIAMAGISLPFVLGTGVSFILIGTIEENVSEGP
                     FIVFMGVAMSITAFPVLARILAELKLLTTDVGKMAMSAAAVNDVVAWILLALAVALSG
                     TGRSPLVALWVFLCATGFVLMCSFLVPPLFKWMSQRCPDGEPVDELYVCATLGGVLAA
                     SFVTDTIGIHALFGAFVIGVLIPKEGAFVGALVEKVEDLVSGLFLPLYFVSSGLKTNV
                     ASIKGARSWGLLVLIIITACFGKIAGSVGVSLVCKIPFMEALAIGLLMNTKGLVELIV
                     LNIGKDRGVLNDETFAILVLMALLTTFITTPLVVAVYKPAKTPSNTQYKYRTLHGRGS
                     STSPFRMLFCFHSVRNIPTMINLIEILRGTGKKEVLLVHAMHLMELSERSSAILMVHK
                     ARKNGLPFWKKDPNSGSDQVVVAFEAFQQLSKVSIWPTTAISAISSMHEDICSGAERN
                     RAAMIILPFHKHPRLDGQLETTRAEYRHVNRKVLEYAPCSVGILVDRGFGGTSHVAAS
                     NVNSLVTILFFGGNDDHEALAYGVRMAEHPGINLIVVRFFLNRKRPTTPGSVTVDITE
                     STATEESQSIDEEVITNFRNKIASKPNTMKYDERMVADALETTESIKEYARSNLFVVG
                     RMPEGEVVEFLKKNSECPEMGPVGNVLISPNFSTAASVLVVQQYHSQLSLLSLASLKE
                     DETTDWVDRIDTN"
     misc_feature    28..2352
                     /gene="LOC139840667"
                     /note="cation/H(+) antiporter 15; Provisional; Region:
                     PLN03159"
                     /db_xref="CDD:215608"
ORIGIN      
        1 atggcctcaa aaaatgaaac acctgactgt ctacctccga tgaaagctac ctcccatggc
       61 gtatttcaag gagatactcc tcttcattct gcactctctc ttgttatctt acaaatggtc
      121 cttgtcatca ctttcacccg agtcctcgct tacctcatga agccgttaag acagccccga
      181 gttgttgcag aaatcgttgg tggagtgttg ctcgggcctt cggctctggg gcgtaacaaa
      241 gcgtttcttc atgcagtttt tcctccaagg agtcttacag tattagacac gctcgcaaat
      301 ttagggctac tgttcttcct ttttttagtc gggctcgagc tcgatttaaa ctctcttcga
      361 agaactggta aaaaggcact ttgtatagct atggcaggaa ttagcctacc attcgtctta
      421 ggaacaggtg tttcttttat tctaattggg acaatcgaag aaaatgtaag tgaaggccca
      481 tttattgttt tcatgggggt tgcaatgtca ataacagctt ttcccgtact cgcgcgtata
      541 ttggctgaac tcaaactgtt aacaactgat gttgggaaaa tggccatgtc agcagccgct
      601 gttaatgatg tagtggcatg gattttactt gcacttgctg ttgcattatc gggtacgggt
      661 cggtccccac ttgttgcact atgggttttt ttgtgtgcaa cggggtttgt tctgatgtgt
      721 tcgtttttgg tcccaccgct ttttaagtgg atgtctcaaa ggtgtccgga tggtgaacct
      781 gtcgacgaac tgtatgtttg tgcgacttta ggtggggttt tggctgcaag ttttgtgact
      841 gatactattg gtattcatgc actgtttggg gcctttgtta ttggtgtttt gatcccgaaa
      901 gaaggtgctt ttgtaggggc gttagtggaa aaagttgagg atcttgtttc gggcttattt
      961 ttaccgttgt attttgtctc tagtggtttg aagacgaatg tagcctcgat caaaggggct
     1021 cggtcttggg ggttgcttgt tttaattatt attaccgcgt gttttggaaa gattgcgggc
     1081 tccgttgggg tttctcttgt gtgcaaaatc ccgtttatgg aggctcttgc gatcgggctt
     1141 ttgatgaata caaagggtct cgttgaactc atagttctta acattggcaa ggacagaggg
     1201 gtattgaacg atgagacgtt tgccatattg gttttgatgg cgttattgac gacgtttatt
     1261 acaaccccgt tagttgttgc ggtttataaa cccgctaaaa caccgtcaaa cacgcaatac
     1321 aaataccgaa ctcttcatgg tagaggctct tccacgagcc cgtttcgtat gttgttctgt
     1381 tttcacagtg taagaaatat tccaacaatg atcaatctaa tcgagatttt acgtgggacc
     1441 ggaaagaaag aggtgcttct agttcacgct atgcacctta tggagctttc tgaaaggtct
     1501 tcagctatac tcatggttca caaggctagg aaaaacgggc tcccgttttg gaaaaaggat
     1561 ccgaattcgg gctcggacca ggttgtggtg gcttttgagg ctttccaaca gcttagcaag
     1621 gtctcaattt ggcccacaac tgccatttcc gccatttcaa gcatgcatga agatatttgc
     1681 agcggcgctg agaggaaccg agctgccatg atcatcctcc cttttcataa gcacccgaga
     1741 ctcgatggac aacttgaaac aactcgagct gagtacagac acgtgaaccg taaggttttg
     1801 gagtacgctc catgttcagt tgggatctta gtagaccgcg ggtttggtgg gacctcacat
     1861 gttgcggcaa gtaatgtcaa ttcgctagta acaatcttat tctttggtgg caacgatgac
     1921 cacgaggcat tagcgtatgg agtccgcatg gctgaacatc ccggaatcaa cctgatcgtc
     1981 gtcaggtttt ttctcaaccg taagcgaccc accactccag gatccgtcac cgtcgacatc
     2041 acagagtcca ccgccacaga agaatcacaa tcaatcgacg aagaagttat tactaatttc
     2101 agaaacaaga tcgcctcaaa gcccaacaca atgaagtacg acgagcgaat ggtggcagac
     2161 gcattagaaa caacagagag tataaaagaa tatgcaagga gtaatctttt tgtagtgggc
     2221 aggatgccag aaggtgaagt ggtggagttt ttgaagaaga atagcgagtg cccggaaatg
     2281 gggcccgttg gaaacgtgtt gatatcgccg aattttagta cagctgcatc ggttcttgtg
     2341 gtgcagcagt atcatagcca attatcattg ctttcactgg cttctttgaa ggaagatgaa
     2401 actactgatt gggtggatag aattgatact aactga
//
LOCUS       XM_071830920            1350 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840668), mRNA.
ACCESSION   XM_071830920
VERSION     XM_071830920.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1350
                     /gene="LOC139840668"
                     /note="uncharacterized LOC139840668; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840668"
     CDS             1..1350
                     /gene="LOC139840668"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687021.1"
                     /db_xref="GeneID:139840668"
                     /translation="MTSGAQTNDNNTIPNITLSAEQFQILLAAAQGNHNNGNNGSLSG
                     GALTWWTAYSQTVGLDAANAIPWTVLKRMMTDKYCPRNQVQKIESEFWELKVKGTDIE
                     AYTNRFLELVTLCPDMVPTEHKKIECYVEGLPDEIQGNVIAAGKETVDGVILMAQNLV
                     MAKRRKLATNKQTEIKAADNKRKFEPAQSSGQGSNKRVSDATKSGYIGTKPLCNRCDK
                     HHHGRCTVECSRCKKIGHLAKNYKVVLPATNTPAAKTDPTVPTCYGCGEVGHFRNQCP
                     KNKTATAGNAKGRAFVMTTEEAREEDEVIMADKNFKINLLPVELGSFDVVVGMDWLTP
                     LRAAIMCYDKTINIPIENGETLIIQGEKSGSKLNIISCIKTRKYLMRGYQAILANVKK
                     VEPEEKRIEDVPVVREFPEVFPEELPGLPPQRQVKFQIDLTPGAAPIAKVYSLEKKL"
     misc_feature    121..405
                     /gene="LOC139840668"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    433..>840
                     /gene="LOC139840668"
                     /note="Arginine methyltransferase-interacting protein,
                     contains RING Zn-finger [Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; Region: AIR1; COG5082"
                     /db_xref="CDD:227414"
     misc_feature    <874..1038
                     /gene="LOC139840668"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atgactagtg gtgcgcaaac aaatgacaac aacactattc ccaacatcac tctctctgcc
       61 gagcaatttc agatactttt agctgccgcc cagggcaacc acaacaatgg caacaacgga
      121 tctttatctg gcggtgcatt gacttggtgg accgcatact ctcaaactgt gggacttgat
      181 gctgcaaatg ccatcccatg gactgtccta aaaagaatga tgacggacaa gtattgtcca
      241 agaaatcagg tccagaaaat agaaagtgag ttctgggaac tcaaggtaaa gggtactgac
      301 attgaggctt ataccaaccg tttcttagaa ttggttacat tgtgccctga catggtacct
      361 acggaacaca agaagattga atgttatgta gaaggtctgc ctgatgagat tcagggtaat
      421 gtgatagctg ctggtaaaga gaccgtcgat ggtgtgatat tgatggctca aaatttggta
      481 atggcgaaaa gaaggaagct cgccactaat aagcaaaccg aaataaaagc tgctgataat
      541 aaaaggaagt ttgagcctgc tcagagttcg ggtcagggtt caaacaaaag ggttagtgat
      601 gctacaaaaa gtggttatat tggaacaaag ccgttatgta atcgctgtga taagcatcat
      661 catgggaggt gcactgttga gtgtagtagg tgtaagaaga ttggccactt agccaagaac
      721 tataaggttg tgctgcctgc aaccaacact ccagctgcaa agactgatcc aaccgtgcct
      781 acttgttacg gttgtgggga agttgggcat ttcagaaacc agtgccctaa gaacaagact
      841 gcaacagcgg gtaatgctaa gggtagagca tttgtcatga ctaccgaaga ggcccgtgaa
      901 gaagatgaag ttataatggc tgacaaaaac tttaagatta acttactgcc agtcgaatta
      961 ggaagctttg atgtagttgt agggatggat tggctaaccc cgttgagagc tgcaatcatg
     1021 tgttatgata aaaccattaa tattcctatt gagaatggtg aaaccctaat catacaagga
     1081 gaaaagagtg gttctaaact taatatcatc tcttgtataa aaacccgtaa atacctgatg
     1141 agggggtatc aagccatctt agctaatgtt aagaaagtcg aaccggaaga gaaacgaatt
     1201 gaagatgttc cggtggttag agaatttcct gaagtttttc ctgaagaact ccctggtctc
     1261 ccacctcaaa gacaagtcaa gtttcaaatc gatctaactc ccggtgctgc acctattgca
     1321 aaggtgtatt ctttagaaaa aaaattgtag
//
LOCUS       XM_071830921            2817 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840669), mRNA.
ACCESSION   XM_071830921
VERSION     XM_071830921.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2817
                     /gene="LOC139840669"
                     /note="uncharacterized LOC139840669; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139840669"
     CDS             1..2457
                     /gene="LOC139840669"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687022.1"
                     /db_xref="GeneID:139840669"
                     /translation="MDQGRAFVGALSVGIGIGVGLGVGRTVNRLTSANDPSTNGLTPQ
                     MMEREMVSMIMDGRDSKVTFNEFPYYLSEQTRTLLTSAAFVYLKNIDFSKHTRNLAPA
                     SRTILLSGPAELYQQMLVKALAHYFEAKLLLLDVTDFSLKIQSKYGASAKPNSLKRSI
                     SETTLARMSGLFESGLSVIQPKPERKAGLRRQSSVADFGSRGPDAIEHPPNLRRNAST
                     AANMNELASNYAPVNPAPLRRTSSWSFDEKLFVQTLYKVLTHTSNNSPIVLYLRDVEK
                     FLGKSQRINTLFQKMLKKLSGPILILGSRVVANDFDVIDDNITSVFPYNIDIKPPEEE
                     KQIASWKNQLQEDMKMIQFQDNRNHIREVLAENDLDCDDLATLCVDDTIDLSKYIDEV
                     VVSAISHHLMNTRNPDYRNGKLVISAASLAHGLSMFQEGRSTRNAPTTDVTGNAVAGT
                     KPETKPDTAAPTEAEASASKNADNAAPPPPPVKEVPPDNEFEKRIRPDVVPPNEIGVT
                     FDDIGALSEIKDSLQELVMLPLRRPDLFVGGLLKPCRGILLFGPPGTGKTMMAKAIAN
                     ESGASFINVSMSTITSKWFGEDEKNVRGLFTLAAKVSPTIIFVDEVDSMLGSRSKGGE
                     HEAMRKIKNEFMTNWDGLLSKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVE
                     QRESIMKTLLSKESVNENLDFRELANMTEGFSGSDLKNLCTTAAYRPVRELIQQERKK
                     DIAKQIQAETGVEPQAPEQTEQRVITIRPLNMKDFKEAKSQVAASLAAEGSIMSELKQ
                     WNDLYGEGGSRKKEQLTYFL"
     misc_feature    1333..2241
                     /gene="LOC139840669"
                     /note="ATP-dependent 26S proteasome regulatory subunit
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: RPT1; COG1222"
                     /db_xref="CDD:440835"
ORIGIN      
        1 atggatcaag gacgtgcgtt tgtgggtgca ttgagtgtgg gaatagggat tggggttggg
       61 cttggagtgg ggaggacggt gaatcgtttg acgagtgcca atgatccgtc gacaaacggt
      121 ctcacgccac aaatgatgga gcgtgagatg gttagtatga ttatggatgg tagagacagc
      181 aaggttactt ttaatgaatt cccatactac ctgagtgagc agacgaggac gttacttaca
      241 agtgctgcct ttgtttatct caagaatatc gacttctcta agcacacaag gaaccttgct
      301 cctgcaagcc gaactatttt gttatctggg cctgccgaac tttatcagca aatgcttgtc
      361 aaagctctgg ctcactattt tgaagcgaag ctgctactac tagatgttac agatttttca
      421 ctcaagatcc aaagcaaata cggagcttct gctaaaccca attccttaaa aaggtctata
      481 tcagaaacaa ctttggcaag gatgtctggc ttattcgaat caggactatc tgtgattcaa
      541 cccaaacccg aaagaaaagc gggcttacgt agacaaagca gtgttgctga ttttggatca
      601 agagggcctg acgctatcga gcatccccca aatttaagga gaaatgcatc taccgcagct
      661 aatatgaatg agctcgcttc aaactacgct cccgtaaatc ctgctccact taggcgtaca
      721 agcagctggt ctttcgatga gaagcttttt gtacaaactc tatacaaggt ccttactcac
      781 acatcgaaca acagcccaat tgtgttgtat cttcgagatg ttgagaagtt tctaggcaaa
      841 tcacaaagga taaatacctt attccagaaa atgttgaaaa aattgtctgg accaatactg
      901 attctaggtt cacgagttgt ggcgaatgac tttgacgtaa ttgatgataa tataacttct
      961 gtgttcccgt ataatattga tatcaaacct cccgaagaag aaaaacaaat cgccagctgg
     1021 aaaaaccaat tgcaagagga catgaagatg atccagtttc aggataatcg gaatcatatt
     1081 cgtgaagtgc ttgcagaaaa tgatcttgac tgtgatgatc tcgctacttt atgtgtcgat
     1141 gacacgattg atctcagtaa atatatagat gaagttgtgg tatcagcaat atctcatcat
     1201 ttaatgaata ctaggaatcc tgattatcga aatggaaaac tagttatttc tgctgcaagt
     1261 ttggcccatg gattgagtat gtttcaggaa ggtagatcta caagaaatgc ccccacaacg
     1321 gatgtaactg gaaatgctgt tgcgggaaca aagccagaaa caaaacccga tactgcagct
     1381 cctactgaag cagaagcatc ggcctctaag aatgctgata atgctgctcc ccctccgcct
     1441 ccggtaaaag aagttcctcc agacaatgaa tttgagaaac gcataaggcc ggatgtagta
     1501 ccaccaaacg agattggtgt aacttttgat gatatcggtg ccttgagtga aattaaagac
     1561 tctcttcaag aactagtcat gttacctttg agacgaccag acttattcgt tggaggcctt
     1621 ttaaaaccat gtagaggaat attactattc ggcccaccag ggacggggaa aactatgatg
     1681 gccaaggcaa ttgctaatga atctggggca agttttatca atgtttctat gtctacaatc
     1741 acttcaaagt ggtttggcga agacgaaaag aatgttcggg gattgttcac gcttgcagct
     1801 aaggtttcac cgactattat atttgtggat gaggttgata gcatgttagg ttctcgatca
     1861 aaaggtggcg agcatgaagc tatgaggaag attaagaatg agttcatgac caattgggat
     1921 gggctactat cgaaacctgg tgaaaggata cttgttcttg ctgcaactaa tagaccattt
     1981 gaccttgatg aagctattat aaggcgtttt gaaagaagga taatggttgg gctgccatcg
     2041 gtagaacaga gggaatcgat catgaaaact cttctatcca aagaaagtgt caatgaaaat
     2101 ttggacttca gagagctcgc aaacatgaca gaaggattta gtggaagtga tttgaagaac
     2161 ttgtgtacaa ctgcggctta ccgacctgtt agagagttga ttcagcaaga gagaaaaaaa
     2221 gatatcgcga aacaaatcca agctgagact ggtgttgaac ctcaagcacc agaacaaact
     2281 gagcagaggg tgattactat caggccactc aacatgaaag actttaaaga agccaaaagc
     2341 caggttgcgg ctagcttggc agccgaaggc tcgataatga gtgagctgaa acaatggaat
     2401 gatctatacg gagagggagg ttcaaggaag aaggagcagt taacttactt cctgtaagtt
     2461 aagttttata acctcctact tgaactccta ttgagtaatt taaacaaacc acctaacatc
     2521 ccaaacttac ccaataacat gcctgtcttc tttagtgtta accactctat cttggttaac
     2581 ttacttcaac atcatattta caaacaaagg atatggtcat caatactgta catatactac
     2641 ggggcgtaag gtggataata attaggaata tacgagagac cgtctttgaa gggacaccat
     2701 gttgtatgaa ttttattttt cttttttatt gtttggtaca taaaaacaca aaatgcaata
     2761 cttttggcat ttatgtaatg tgaaatgtaa actgaaacaa ttgtttctgt aacctat
//
LOCUS       XM_071830922             300 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SPIRAL1-like 5
            (LOC139840670), mRNA.
ACCESSION   XM_071830922
VERSION     XM_071830922.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..300
                     /gene="LOC139840670"
                     /note="protein SPIRAL1-like 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139840670"
     CDS             1..300
                     /gene="LOC139840670"
                     /codon_start=1
                     /product="protein SPIRAL1-like 5"
                     /protein_id="XP_071687023.1"
                     /db_xref="GeneID:139840670"
                     /translation="MSKSGGGQSSLGYLFGSDKSGETKTDGSKVLSRPVCVPPYGTDD
                     YAKSKSPEMTTIQETYIYRGDGDKSKSILVTGRPSTKVKSVPGGDSSLGYLFGDK"
ORIGIN      
        1 atgagcaaat ctggaggagg ccaaagttct ctaggatact tatttggttc agacaaatcg
       61 ggtgaaacaa aaaccgatgg atctaaagta ttgtcacgac ctgtttgtgt gcccccgtat
      121 ggcaccgatg actatgcgaa gtcgaaatca cctgaaatga ctacaataca agagacatat
      181 atctatcgtg gagatggtga taaatccaaa agtattttag taactggtcg accatcgaca
      241 aaggtgaaat ctgttcctgg tggagattca tctcttggct acttgtttgg agataagtga
//
LOCUS       XM_071830923            1104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840672), mRNA.
ACCESSION   XM_071830923
VERSION     XM_071830923.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1104
                     /gene="LOC139840672"
                     /note="uncharacterized LOC139840672; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840672"
     CDS             1..1104
                     /gene="LOC139840672"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687024.1"
                     /db_xref="GeneID:139840672"
                     /translation="MNNIDYDLEDLAQVTSAYDPEQQLEILDFLDAEEEEENQEPIPK
                     NPRRYFHRDRAGRATLLWNDYFFDTPTFPEDKFRRRFRMSSRLFNRISADILNYSQEP
                     IPSYFKYFHQRRDATGLLGFTIYQKITSVIRQLAYGVAPDIFDEYLHIGETTSYRCLE
                     NYCKSVIHLFSIEYLRKPNTHDVQRLITKHEQMHGFLGMLGSLDCMHWAWKNCPISWK
                     GQYTRGDHVHPTIMLEAVASYDLWIWHAYFGPAGSNNDINVLTQSDLFKELLEDRAPS
                     CNYTVNGKHFTKEYYLADGICPDGATLVKSFKSTVEPKISKFKRYQESARKDIERAFS
                     VLQGRFAIIKSHARQFYIEKIQCIIYTCVIFFR"
     misc_feature    517..1092
                     /gene="LOC139840672"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgaataata tcgattacga tttagaagac ctcgcacaag taacaagtgc gtacgatccg
       61 gaacaacaac tcgaaattct tgatttttta gatgccgaag aagaggaaga aaatcaagaa
      121 cctattccga aaaatccaag aagatatttt catagagatc gggctggaag ggctacactc
      181 ttgtggaatg attacttttt cgacacacca accttccccg aagataaatt tcgaagaagg
      241 tttcgaatga gcagtcgatt gtttaaccgt atatccgcag atatactcaa ttattctcag
      301 gaacctattc cttcatactt taaatatttc catcaaagaa gggatgcaac cggtttactc
      361 gggtttacta tttatcaaaa aatcacatcc gttatacgac aattagcata cggtgttgct
      421 cccgatattt ttgatgagta tttgcatatt ggtgaaacta catcataccg ttgtttagaa
      481 aattattgca aaagtgttat acatttattt tcaatcgaat atttaagaaa acctaatact
      541 catgatgttc aacgtttaat tacaaaacat gagcaaatgc atggttttct gggcatgctc
      601 ggtagtctag attgtatgca ttgggcttgg aaaaattgcc caatctcttg gaaaggtcaa
      661 tacacacgcg gcgatcatgt tcacccaaca ataatgttag aagcggtcgc ctcatatgat
      721 ttgtggattt ggcacgctta ctttggacca gctggttcaa ataatgatat caatgtgtta
      781 acgcaatccg atttatttaa agagttactt gaagatagag ctccatcgtg taactatacg
      841 gtgaatggga aacattttac aaaagagtat tatttagcag acggaatttg tcctgatggg
      901 gcgacacttg tgaaatcgtt caaaagtacg gttgaaccaa aaatatcaaa attcaaaagg
      961 taccaagagt cagcaagaaa ggatatcgaa cgagctttca gtgttcttca aggtcgtttt
     1021 gcaatcatta aaagtcatgc aagacaattc tatatcgaga aaatccagtg cattatatat
     1081 acgtgcgtga ttttttttag gtaa
//
LOCUS       XM_071830924            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840673), mRNA.
ACCESSION   XM_071830924
VERSION     XM_071830924.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139840673"
                     /note="uncharacterized LOC139840673; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840673"
     CDS             1..1038
                     /gene="LOC139840673"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687025.1"
                     /db_xref="GeneID:139840673"
                     /translation="MKIISYNIRGFGVGVESKFGETKKFIIREKPAFLALQETKLNTV
                     NGHWIYSLWGDVNFDFIQTEKVGKSGGQLLIWDTNYFAALDVIRFDRVLGVRGIWKSS
                     GIPLNVLNIYGPHDDSKKQILWDSLSKLVSNDNEAWVLCGDFNEVRDRVERFNCEFVE
                     GRAKKFNEFISLCNLTDIPIGGRVFTRVSDDGFKFSKLDRFLVSESFLELWDNLSAIT
                     LDRTKSDHCPIMLKNEEINFGPKPFEVFDVWFDDVGVEKIISDAWNETVKPSNRSDCT
                     FMYKLKNVKNALRSWSKDKFGQIDREIETHKSEALKIELKAEKQQVDESELERWKLER
                     KKWIEKDRIKA"
     misc_feature    7..696
                     /gene="LOC139840673"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,112..114,334..336,427..429,433..435,595..597,
                     673..678)
                     /gene="LOC139840673"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(112..114,673..675)
                     /gene="LOC139840673"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(334..336,433..435,676..678)
                     /gene="LOC139840673"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaagataa tctcatataa cattagagga tttggtgtcg gggtagaaag taaatttggg
       61 gaaacaaaaa aatttatcat tcgtgaaaag cctgctttcc tagctttaca agagacgaaa
      121 ttaaacaccg ttaatggtca ttggatatac tcattatggg gtgatgtgaa ttttgatttt
      181 attcaaacag aaaaagtagg gaaatcgggt gggcaattgt tgatttggga tacaaactac
      241 ttcgctgcat tagatgtgat tcggtttgat cgggttttag gagttagggg tatatggaag
      301 agcagtggta tacccttaaa tgttcttaac atctatggac cccatgatga ttcgaaaaag
      361 caaatcttat gggattcgtt atctaagttg gttagtaatg ataatgaggc atgggttctt
      421 tgcggtgatt ttaatgaagt aagagatcga gttgagcgat ttaattgtga atttgttgaa
      481 ggtagagcaa aaaagtttaa tgagttcatc agtttatgca acctaacaga tattcctatc
      541 ggggggaggg tttttactag ggtgagcgat gacggcttca aatttagtaa attggacagg
      601 ttcctagttt cggaaagctt tttggaatta tgggataatc tttcagctat caccctagac
      661 cgtactaagt ctgaccattg cccaataatg ctaaaaaatg aagaaatcaa ttttggtccg
      721 aaacctttcg aggtttttga tgtttggttc gatgatgttg gtgttgaaaa aatcattagt
      781 gatgcttgga atgagacggt taaacccagc aacagaagcg actgcacctt catgtataaa
      841 ttaaaaaacg tcaaaaatgc tcttagaagc tggagtaaag ataagttcgg gcaaattgat
      901 cgggaaatcg aaacgcataa aagtgaagca ttaaaaatcg agctcaaagc tgagaagcag
      961 caggtggatg aaagtgaact tgaaaggtgg aaacttgaga ggaaaaagtg gatagaaaag
     1021 gaccgaatta aagcttga
//
LOCUS       XM_071830925            2052 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RNA-binding NOB1-like
            protein (LOC139840674), mRNA.
ACCESSION   XM_071830925
VERSION     XM_071830925.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2052
                     /gene="LOC139840674"
                     /note="RNA-binding NOB1-like protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840674"
     CDS             12..1784
                     /gene="LOC139840674"
                     /codon_start=1
                     /product="RNA-binding NOB1-like protein"
                     /protein_id="XP_071687026.1"
                     /db_xref="GeneID:139840674"
                     /translation="MESPNPVPTTCWSNIVKQPPPPENPNNHHHDQSQSAAALVGSCK
                     STKGIAVAVIDANAIIQGGEQLHHAADKFVSVTDVIREIRDPTSRHRLNFLPFTVDNM
                     EPSPESLDKVISFAKATGDLQTLSDVDLKLIALTHTLESQIHGTSHLRDAPPPIRTVN
                     VKRLPEKELPGWGSNVPNLAQWEALEHAVGDGSGPESRILPLKDLNMNVIPGDKDQIN
                     EDAASADGSEQQYGDDGVVGRPKKYLPKKKEVVIEGKKMVAEGIDASQGQVDDNADDW
                     LPAVSRSTHRRFLRRKARREMSEAASVKDDQNDANSQIDDASLPDLIHEDELSVKEKT
                     ETDGHDGGEDLSITLDNMRLNEESVKPCEDGELDETKNVIERFEQLDMNSETNESIDA
                     SFVDDESSEQSWMIRSLSESSVACVTGDFAMQNVILQMGLRLVAPGGMQIRELHRWVL
                     KCHACFKVTMEVGKIFCPSCGNGGTLRKVAVTVGENGATIASRRPRISLRGTKFSLPL
                     PQGGRNAITKNPILREDQLPQKFLHPKSKKKNKEVDDIFATNELFTHHTDKRAPLQPP
                     VRKALAVFSGKRNPNDNHYSRAMH"
     misc_feature    168..503
                     /gene="LOC139840674"
                     /note="VapC-like PIN domain of eukaryotic ribosome
                     assembly factor Nob1 and archaeal UPF0129 protein
                     Ta0041-like homologs; Region: PIN_Nob1-like; cd09876"
                     /db_xref="CDD:350224"
     misc_feature    1335..1547
                     /gene="LOC139840674"
                     /note="Nin one binding (NOB1) Zn-ribbon like; Region:
                     NOB1_Zn_bind; pfam08772"
                     /db_xref="CDD:462597"
ORIGIN      
        1 acaaaaccta catggagtca ccaaatccag ttccaactac atgctggagc aacatagtaa
       61 aacaaccacc gccacctgaa aaccctaata atcaccacca tgatcaatca caatcagccg
      121 cagctctcgt cggcagctgc aaatccacca aaggcattgc cgtcgccgtt atcgatgcaa
      181 acgcaattat acaaggcggt gaacagttgc accacgccgc cgataaattc gtctccgtta
      241 ctgatgttat tcgtgaaata cgagatccta cttcgcgcca ccgcctcaat ttccttccgt
      301 tcaccgttga taacatggaa ccctcacctg aatcactcga taaagttatt agctttgcga
      361 aggcaaccgg agatttacaa acattatcag atgttgatct taagctaatt gctttgactc
      421 atacattgga gtctcagatt catggaacta gccatcttcg agatgcgcct ccaccgattc
      481 gcaccgtaaa tgtaaaacgg cttcccgaga aagagttacc gggttggggg tccaatgttc
      541 ctaacttagc ccaatgggaa gcattagaac atgcagttgg ggatggttca ggacccgagt
      601 caagaattct tccattgaaa gatttaaaca tgaatgttat tcctggcgat aaggatcaga
      661 ttaatgaaga tgctgcatca gcagatgggt ctgaacaaca atatggtgat gatggtgttg
      721 ttggaagacc taaaaagtat ttacctaaaa agaaagaagt tgttattgaa gggaaaaaga
      781 tggttgcaga gggaattgat gcatcacagg ggcaagttga tgataatgca gatgattggc
      841 tccctgctgt tagtcgaagc actcatagga ggtttttaag gaggaaggct agacgtgaaa
      901 tgtccgaggc agcatctgta aaagatgatc agaatgatgc aaactcgcag attgatgatg
      961 caagtttacc ggatttgatc catgaagatg agttaagtgt taaagaaaag actgaaactg
     1021 atggacacga tggtggtgaa gatctttcaa taacattgga taatatgagg ctcaatgaag
     1081 aatcagtaaa gccttgtgaa gatggtgaat tagatgagac caaaaatgtg attgagcggt
     1141 ttgaacagtt ggacatgaac agtgagacca atgaaagtat tgatgcatca tttgtagatg
     1201 atgaaagcag tgagcagagt tggatgataa ggtcactttc agagtcgagt gttgcttgtg
     1261 ttactggtga ttttgcaatg cagaatgtta ttctgcagat gggtttacgg ctagtggcac
     1321 caggaggaat gcagatacgc gagttgcaca ggtgggtatt gaaatgtcat gcttgcttta
     1381 aggtgacaat ggaggtcggt aagatatttt gtccaagttg tgggaatgga ggtactttac
     1441 ggaaagtagc tgtaactgtt ggtgaaaatg gagctacgat agcatctcgt agaccacgta
     1501 tatcgttgcg cggcactaag ttttcattgc ctctcccgca aggaggaaga aatgctataa
     1561 ccaagaaccc tattttgcgc gaagatcaac ttccacaaaa atttctgcat cccaaatcaa
     1621 aaaagaagaa taaagaggtg gatgacatct ttgcgacaaa tgaattgttt actcaccata
     1681 cagacaagag ggctcctctg caaccacctg taaggaaagc ccttgcagtt tttagtggca
     1741 aaaggaaccc aaatgacaat cactattctc gtgctatgca ttagaagtgt tcttttgggt
     1801 ttgcagtttg tgacttttcc caagtactcg aagactcgag tgccgtgagt tatatttatt
     1861 tatgatttta atcgcataat gcaattttgg tttcatttct tttggttgat tttgttagta
     1921 gatattgcag actatcaatt gtcatttaaa caaaaatgta tgaagaaata ttttttgtat
     1981 gtcaggaaaa tacactgtaa ttttcaacag gtttatatct cgttatatca tgggtgttgt
     2041 tgcaacagta ga
//
LOCUS       XM_071830926             675 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840675), mRNA.
ACCESSION   XM_071830926
VERSION     XM_071830926.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 65% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..675
                     /gene="LOC139840675"
                     /note="uncharacterized LOC139840675; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840675"
     CDS             1..675
                     /gene="LOC139840675"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687027.1"
                     /db_xref="GeneID:139840675"
                     /translation="MGLKGSSSKKAPTAIGGSQMSVTMREASSGKKHINTKSSLKLQH
                     IKNLAFWASYDAVIPSLGAFYGHHLAASSEALVTPVDTSLFTCQRQSLSLYVCVHVRA
                     CACACESILYPGYNCTIRIEQNKFNALNKGKKINHYLQNNIAYTCHFCSHRNMKRGTP
                     RNTNQPKVKAHPKSTNHNSSNKVSLSDTTKDFVVSNIIAAPLRPTINESESRSKASAN
                     TCKRNE"
     misc_feature    121..450
                     /gene="LOC139840675"
                     /note="RNAse P Rpr2/Rpp21/SNM1 subunit domain; Region:
                     Rpr2; pfam04032"
                     /db_xref="CDD:427665"
ORIGIN      
        1 atgggcttga aaggatcatc gagcaagaaa gctcctactg caatcggtgg gtctcaaatg
       61 tcagttacaa tgagagaagc ctcatcgggg aagaaacaca taaataccaa gtcttcatta
      121 aagttacaac atataaagaa ccttgcattt tgggccagtt atgatgcagt cataccttca
      181 ttgggtgcct tttatggcca ccatcttgct gcttcttctg aggcattggt aacacctgtt
      241 gacacatcct tgtttacttg tcaaaggcaa tctctctccc tctatgtgtg tgtgcacgtg
      301 cgtgcgtgcg cgtgtgcatg tgaatctata ctttatcctg gctacaactg taccatccga
      361 attgagcaaa acaagtttaa tgctctgaac aaaggcaaga aaattaatca ttatcttcag
      421 aacaatattg catacacatg ccatttttgc tcacaccgga atatgaaaag aggcaccccc
      481 agaaatacaa atcaaccaaa ggtcaaagcg catccaaagt caaccaatca taattccagt
      541 aacaaagttt cattatctga tacgactaaa gattttgtgg tttcaaacat tatagcagct
      601 ccactacggc caacaataaa tgaatctgaa agtcgttcta aagcttcagc gaacacatgt
      661 aaaagaaacg aataa
//
LOCUS       XM_071830927             564 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kiwellin-1-like
            (LOC139840676), mRNA.
ACCESSION   XM_071830927
VERSION     XM_071830927.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..564
                     /gene="LOC139840676"
                     /note="kiwellin-1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 14 Proteins"
                     /db_xref="GeneID:139840676"
     CDS             1..564
                     /gene="LOC139840676"
                     /codon_start=1
                     /product="kiwellin-1-like"
                     /protein_id="XP_071687028.1"
                     /db_xref="GeneID:139840676"
                     /translation="MTKPNQSNLLALIALLSISCLATIIEAQVCSPSRRLKGKKPPGG
                     HCYHNEAECCKEEKFYETYRCSPPVSRRTQAILTLNSFEKGGDGGWASQCDEKFHSDK
                     SKVVALSTGWYNNGKRCLKFITIYGNGRSVQAKVVDQCDSTMGCDDEHAYQPPCRNDI
                     VDASHAVWEALGVPRKDRGWMKVTWSD"
     misc_feature    178..561
                     /gene="LOC139840676"
                     /note="double-psi beta-barrel fold of the kiwellin family;
                     Region: DPBB_kiwellin-like; cd22270"
                     /db_xref="CDD:439250"
     misc_feature    order(184..186,190..192,271..288,346..351,355..357,
                     412..417,421..423)
                     /gene="LOC139840676"
                     /note="putative effector binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:439250"
ORIGIN      
        1 atgacaaaac caaaccaatc aaatcttcta gccctcatcg cgctcctttc gatctcttgt
       61 ctagctacaa ttatcgaagc acaagtttgc agcccgagca ggcgccttaa gggtaagaaa
      121 ccaccaggag gccactgtta ccataacgag gccgaatgct gcaaagaaga gaaattttac
      181 gaaacatacc gctgctcacc acccgtatca cgaagaacgc aagctatcct aacactaaac
      241 agcttcgaaa agggtggtga tggcgggtgg gcgtcacaat gtgacgagaa atttcattct
      301 gataagagta aagttgtggc attatcgact ggttggtata ataatgggaa aaggtgtctt
      361 aagtttatta cgatttatgg taacggtagg agcgtgcaag ctaaggtggt cgatcagtgt
      421 gattcgacga tggggtgtga tgatgagcat gcttatcaac cgccgtgcag gaatgatatt
      481 gtggatgcat cgcatgcggt ttgggaggcg ctcggtgtac cgagaaagga ccgtggttgg
      541 atgaaggtta cttggtctga ctaa
//
LOCUS       XM_071830928             708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840677), mRNA.
ACCESSION   XM_071830928
VERSION     XM_071830928.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..708
                     /gene="LOC139840677"
                     /note="uncharacterized LOC139840677; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840677"
     CDS             1..708
                     /gene="LOC139840677"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687029.1"
                     /db_xref="GeneID:139840677"
                     /translation="MYVNGKKITLTSLKLSEIPITDPTVKDDKTLFMTQDEDDTELKG
                     GTGAYLLLVESDVRLIKDFSIIVAPITECLKKGVFEWSSSAQSAFESLKEKLSSAPIL
                     ALPNFDMLFELECDASGVGIGAVLVQALKYINGQYKLNPRHAKWVEFLLMYSFVSKHK
                     AGTSNVVDDALSRRYSLLSILEARVLGFSFVKELYEADPDFAPILNYSSTEFKRDYVE
                     HDSFLFKGSRLCIQKIQ"
     misc_feature    241..>384
                     /gene="LOC139840677"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    334..525
                     /gene="LOC139840677"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgtatgtta atggaaagaa gatcactctc acttctttaa agcttagtga aatacctata
       61 actgacccta ctgttaagga tgataaaact ttgtttatga ctcaagatga agatgatact
      121 gagttaaagg gtggtactgg tgcttacttg ttgctggttg aaagcgatgt aagacttatc
      181 aaagacttct ccataattgt tgctccaatt actgagtgtt tgaagaaagg ggtatttgaa
      241 tggtccagtt ctgctcagtc agcatttgaa tcattgaagg aaaagctaag ttcagcacct
      301 atacttgctt tacctaattt tgatatgctg tttgaacttg aatgtgatgc tagtggtgtt
      361 ggcattggag ctgtgttagt gcaagcattg aaatacatta atggtcagta caaattaaat
      421 ccaaggcatg caaaatgggt tgaattcttg ctgatgtact cctttgtgtc caagcacaag
      481 gctggtactt ctaatgttgt tgatgatgct ctatcaagga gatattcttt gttgtcaatt
      541 cttgaagcta gagttcttgg attctcattt gttaaggagt tatatgaagc tgatccagac
      601 tttgctccaa ttttaaatta ttcatctact gagttcaaaa gagattatgt tgaacatgat
      661 agttttctat tcaagggtag cagattgtgc atccaaaaga ttcaataa
//
LOCUS       XM_071830929            2386 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840678), mRNA.
ACCESSION   XM_071830929
VERSION     XM_071830929.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2386
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2386
                     /gene="LOC139840678"
                     /note="uncharacterized LOC139840678; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840678"
     CDS             1..2304
                     /gene="LOC139840678"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687030.1"
                     /db_xref="GeneID:139840678"
                     /translation="MALSTISPSYSPADSTGGGGDNTSIYQLLLDRCRSLEASYANLQ
                     EQFHMLEQEQTSSSSLSLCNHHGRLAQDEMMTSGSGGMSSFNGWISVPDVLPVGFSYK
                     RALDQLGHAVYVSKAITREIIYWNRSAEKLFGYEDYEALGQTVSDLLIYDEFHISSEK
                     ILERVRSGQSWAGQFPFRKRSGITFMALVNKSPLYEDGELVGIVTVASDATIFNKIKS
                     ENQKSYDEDPSNTQAKTRGLNFKKIQWHPPQQLSTFVSNLTSKDILRKGGGINRHTGD
                     TSVDMDGNVNELENVNLERPPKAPPAKHGFGFNNLWKKATGADTEEDELSEPSNYVCF
                     PSEGGNMGGYGGFDKGSKNQLCAGRNGLVHAAKVLSKLNFHPKTINAHHDGPTDVQES
                     HEAVNVQNFRQNSATAAASGHGVSVVEYETDISHRAYSSVDEKGNLNANGHAFANNIE
                     NGFSYEAHIEEINESFEVVKPVDELAISGFQYSRRELELENDLNSAADCDIRWEDLIF
                     KEEIGHGSFARVYRGIWNGSDVAVKVYLGNQYSEKVLQDYNKEIDIMKRLRHPNVLLY
                     MGSVCSQDKLAMVTELLPRGSLFNVLHNNSHSLDIKRRLRMAADVARGMNYLHHRNPP
                     IVHRDLKSSNLLVDKNWSVKVGDFGLSKLKHATFLTARSGRGTPQWMAPEVLRNEPSN
                     EKSDVFSFGIILWELVTQCVPWNNMNPLQVVGVVGFMDRRLDLPEDLDPSLSCIIQDC
                     WQSNPSERPSFENIMMRLPGIMQKLPG"
     misc_feature    301..>633
                     /gene="LOC139840678"
                     /note="PAS domain [Signal transduction mechanisms];
                     Region: PAS; COG2202"
                     /db_xref="CDD:441804"
     misc_feature    1534..2274
                     /gene="LOC139840678"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(1534..1548,1558..1560,1591..1593,1597..1599,
                     1690..1692,1738..1749,1759..1761,1765..1767,1885..1887,
                     1891..1893,1897..1902,1906..1908,1939..1941,1948..1950,
                     1996..2007)
                     /gene="LOC139840678"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(1534..1548,1558..1560,1591..1593,1597..1599,
                     1690..1692,1738..1749,1759..1761,1885..1887,1891..1893,
                     1897..1902,1906..1908,1939..1941)
                     /gene="LOC139840678"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1546..1548,1759..1761,1765..1767,1885..1887,
                     1891..1893,1897..1899,1948..1950,1996..2007)
                     /gene="LOC139840678"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1936..1962,1993..2007)
                     /gene="LOC139840678"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
ORIGIN      
        1 atggctttat caaccatcag tcccagctat tctccggcgg attccaccgg cggcggcggt
       61 gataacacat caatctacca acttttactc gaccggtgcc ggagtttaga agccagttat
      121 gccaacttac aagaacagtt tcacatgctt gaacaagaac aaacatcatc atcatcatta
      181 tcattatgta atcatcatgg gagattagct caagatgaaa tgatgacgtc aggatccggt
      241 ggtatgtcgt cattcaacgg ttggattagt gtccctgatg tgttgcctgt tgggttttcg
      301 tataaaagag ctttagatca gttgggtcat gcggtttatg tcagtaaagc tatcactcgt
      361 gaaattattt attggaaccg ttctgctgag aaactgtttg gttacgagga ttatgaggca
      421 ctgggccaaa cagtttcaga cttgcttatt tacgatgagt ttcatatatc ttctgagaag
      481 attctagaaa gggtgaggtc tggtcaaagt tgggcaggtc aatttccgtt taggaagaga
      541 tcgggcataa cgtttatggc tttagtgaac aaaagcccgt tgtatgaaga tggtgaactt
      601 gttggtattg ttacagttgc aagtgacgcg actattttta ataaaataaa atcagaaaac
      661 cagaaatcgt atgatgaaga tccttctaat actcaagcga aaacacgggg attaaacttc
      721 aaaaagattc aatggcaccc gccgcaacaa ttatcaactt ttgtttccaa tctgacctcg
      781 aaagatattt tgcgaaaggg tggaggaatt aatcgtcata cgggagatac atctgtggac
      841 atggacggga acgttaacga acttgaaaac gtaaatttgg agaggccccc gaaagctccc
      901 cctgctaagc atggatttgg ttttaacaac ctttggaaga aagccactgg tgccgacaca
      961 gaagaagatg aactttctga accttcaaac tatgtatgtt ttccttctga aggtggcaat
     1021 atgggcggtt atggtgggtt cgataaaggg tcaaaaaatc aactttgtgc tggtcgaaat
     1081 gggttggttc atgctgcgaa agtcctgtcg aagttgaatt tccacccgaa aactataaac
     1141 gcacaccacg atggtcccac cgatgttcaa gaaagtcacg aggcagtaaa cgtacaaaat
     1201 tttcgccaaa actcggcaac tgcagcagct tcgggccatg gtgtttcggt tgtagagtat
     1261 gaaaccgaca tatcacatag agcgtattct tctgtcgacg aaaaaggaaa tctaaacgca
     1321 aatggacatg cattcgccaa taacattgaa aatggttttt catatgaagc gcacattgaa
     1381 gagataaacg agagctttga agtagtaaaa ccagttgatg agctggcgat ttcaggtttt
     1441 caatattcga gacgagagtt ggagctcgag aatgatctaa actctgcagc tgattgcgac
     1501 attcgatggg aagatctaat tttcaaggaa gaaatcggtc atgggtcatt tgctagggta
     1561 taccgaggaa tttggaatgg atcggatgtc gcggttaaag tttacttagg taatcaatac
     1621 agtgagaagg ttttgcagga ctacaataaa gagattgata taatgaaacg actgcgtcat
     1681 ccaaatgtat tgctttatat gggctcagta tgttcacaag acaaacttgc catggttacg
     1741 gagctactac ccagggggag tcttttcaat gttcttcaca acaacagtca ctcgttagat
     1801 attaaacgac gtctacggat ggctgctgat gtcgcaagag gtatgaacta tctgcatcac
     1861 cgaaatcctc caatagtaca cagagatctc aagtcttcaa accttcttgt cgataagaac
     1921 tggtccgtga aggttggaga ttttggtctt tcgaaattga aacatgcaac gtttttaact
     1981 gcaagatccg gtagagggac acctcaatgg atggcgcctg aagttctgcg taatgaacct
     2041 tcaaatgaga agtcagatgt gtttagtttt ggtataatac tatgggagtt agttacacag
     2101 tgtgtccctt ggaacaatat gaatccgtta caggttgttg gagtagtggg gtttatggac
     2161 cgtcggttgg acttaccaga agacttagac ccgtctctat catgtataat ccaagattgt
     2221 tggcaaagta atccatctga gcgtccttcg tttgagaaca taatgatgag actaccaggc
     2281 ataatgcaaa agcttccagg ttaaagcagt tttatcttaa tgaattagac tttatcaggc
     2341 ttactgcgcc tttataaaat aaggtgaggt tcgacatata tatgtg
//
LOCUS       XM_071830930             840 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840679), mRNA.
ACCESSION   XM_071830930
VERSION     XM_071830930.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..840
                     /gene="LOC139840679"
                     /note="uncharacterized LOC139840679; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840679"
     CDS             1..840
                     /gene="LOC139840679"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687031.1"
                     /db_xref="GeneID:139840679"
                     /translation="MEAVSEITPLKLITDQNSDVMIKVKVHITWRKTYWKNPNSASSL
                     EIIFVDSEGSKIRATLDKAAMTFFGSTFKEGNYYEVSNFRVCKDNDDVPLLDHDFKIH
                     LMRGSRVRKTPAFDIQKDVFRVVKYDDVNQSLLKEDEIFDVVGKLVELKDLRVTRSKG
                     IETKCIEFQLQDLSGENIKCALWGQHATHLHEYVAALDDTFKNNVVMLIHNCRLKVWE
                     VSNMLWGCRVYLNEAVAPVEQYKSLMAATQTNPGMNQSASTAINVGVKITTNVDRFTA
                     PTL"
     misc_feature    61..327
                     /gene="LOC139840679"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(61..63,229..231,235..237,241..243,322..324)
                     /gene="LOC139840679"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239926"
     misc_feature    order(76..84,133..144,148..150,169..177,181..183,226..228,
                     250..258,298..306)
                     /gene="LOC139840679"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
     misc_feature    424..732
                     /gene="LOC139840679"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(424..426,613..615,619..621,625..627,676..678)
                     /gene="LOC139840679"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(439..447,499..510,514..516,535..543,547..549,
                     637..645,655..660)
                     /gene="LOC139840679"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
ORIGIN      
        1 atggaagctg tgagtgaaat cacccctttg aaactcatca ctgaccaaaa cagtgatgtc
       61 atgataaaag ttaaggtgca tatcacctgg agaaaaacat attggaaaaa ccccaatagc
      121 gcatcgtccc tcgagataat atttgttgat tcagagggtt ctaaaataag ggcgacattg
      181 gataaagctg cgatgacatt ctttggtagc actttcaaag aaggaaacta ttatgaagtt
      241 agcaactttc gtgtttgcaa agacaatgat gatgttcctc ttcttgatca tgattttaag
      301 attcacttaa tgcgtggatc tagagtccga aaaactccag cttttgacat ccagaaggat
      361 gtctttcgag ttgtcaaata tgatgatgta aatcagtctc tgttgaagga agatgaaatt
      421 tttgatgtgg tcggaaagtt agttgaactc aaagacctac gtgtgacacg cagcaagggg
      481 attgaaacaa agtgtattga atttcaactg caagacttaa gtggtgagaa cattaaatgt
      541 gcactgtggg gacaacatgc aactcatctt catgagtatg ttgctgcttt ggatgataca
      601 ttcaagaaca atgttgtcat gcttattcac aactgcagac ttaaggtttg ggaagttagc
      661 aatatgttgt ggggatgtcg tgtttactta aacgaggcag ttgcacctgt tgaacagtat
      721 aagtcattga tggctgctac tcaaactaat cctgggatga atcaatcagc ttctactgcc
      781 attaatgttg gcgtgaaaat cactactaat gtcgacagat tcactgcccc cacactgtag
//
LOCUS       XM_071830931            1256 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides expansin-A6-like
            (LOC139840680), mRNA.
ACCESSION   XM_071830931
VERSION     XM_071830931.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1256
                     /gene="LOC139840680"
                     /note="expansin-A6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 174
                     Proteins"
                     /db_xref="GeneID:139840680"
     CDS             15..791
                     /gene="LOC139840680"
                     /codon_start=1
                     /product="expansin-A6-like"
                     /protein_id="XP_071687032.1"
                     /db_xref="GeneID:139840680"
                     /translation="MAVVSVILFTVFSVFATVSIARIPGNFAGGDWEGAHATFYGGSD
                     ASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCADDPRWCHPGSPS
                     IIVTGTNFCPPNYALPNDSGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCR
                     KAGGIRFTINGFRYFNLVLISNVAGAGNIQKVWIKGTKTNWMSMSRNWGQNWQSNAVL
                     TGQSLSFRVTAGDRRTSTSWNIAPANWQFGQTFAGKNFRV"
     misc_feature    45..782
                     /gene="LOC139840680"
                     /note="expansin A; Provisional; Region: PLN00050"
                     /db_xref="CDD:165628"
ORIGIN      
        1 ctctcaccta aaaaatggct gttgtttccg ttattctctt cactgttttc tcggtgtttg
       61 caactgtctc aattgctaga attcccggaa acttcgccgg cggtgattgg gaaggtgctc
      121 atgcgacgtt ctacggaggt agtgatgctt ctggtaccat gggtggtgct tgtgggtacg
      181 gtaacttgta cagtcaaggt tacggtgtca acacggccgc acttagcacc gcattgttca
      241 ataacggact gagctgcggc gcgtgttttg aaatcaagtg tgccgatgac ccgagatggt
      301 gtcatccggg tagcccgtcc attattgtta ccggaaccaa cttttgtcca ccgaattacg
      361 ctcttcctaa cgacagtggt ggctggtgta accctcctcg tactcacttc gatctcgcca
      421 tgcctatgtt tctcaaaatt gccgagtatc gtgccggaat cgtccccgtc tcttatcgtc
      481 gggtgccatg taggaaggca ggcgggatta ggttcacaat caacggtttc cgttacttca
      541 atttggtttt gatcagtaac gttgcgggtg cgggtaatat ccaaaaggtg tggatcaaag
      601 ggacgaaaac aaattggatg agcatgagtc gtaattgggg gcaaaactgg caatcgaatg
      661 cagttcttac tggtcaatca ctttcgttta gagtcactgc tggtgaccgt cgtacatcca
      721 cctcatggaa cattgcaccg gcaaactggc agttcggtca aacctttgcc ggaaagaatt
      781 ttcgggtgta aggtgggagt taattcgcca atttttacct atttaggaaa agatatgttt
      841 tagtttatgt tgttgattgt atgttgtcta gtagatgtgg agttttttta tttggggtgg
      901 tgaagtgtaa tttgtggaaa ggtggaggag tggaggtaac atgtttggaa actttttaga
      961 attcccggca tttttagggt ttgtgtagtg tctgaggcgg ctgcaaaaag aaggtgcagc
     1021 ccgcagcaaa ttaaagattt attagtcaaa aagtggtggt ttttgttttt agtattttgg
     1081 ttaaaaagtg atttgtattt agggtttgtg ggactactaa tttacctctt gtaagtcaga
     1141 atgacaacta gtttaatttt aagacttggg tttgttttaa tcttgtgagt attgaagttt
     1201 atcctatact tttgtgtttt ttttgggctt attttatacg gagtacttta atttta
//
LOCUS       XM_071830932             547 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tobamovirus multiplication
            protein 2A-like (LOC139840681), mRNA.
ACCESSION   XM_071830932
VERSION     XM_071830932.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..547
                     /gene="LOC139840681"
                     /note="tobamovirus multiplication protein 2A-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840681"
     CDS             26..547
                     /gene="LOC139840681"
                     /codon_start=1
                     /product="tobamovirus multiplication protein 2A-like"
                     /protein_id="XP_071687033.1"
                     /db_xref="GeneID:139840681"
                     /translation="MACKGFLECLLKLLNFLLTLFGLAMVGYGVYMFVMYKNAMDNPE
                     PHGDLIPLGRPMLMAVSLSTNNIFDNLPTAWFIYLFVGIGAAIFIISCFGCIGAATRS
                     GCCLTCYSVLVILLILAELGCAAFIFFDKSWRSNIPVDKTGDFDMIYRFLEKNWKICR
                     WVALGAVILEVSQ"
     misc_feature    191..>421
                     /gene="LOC139840681"
                     /note="Tetraspanin family; Region: Tetraspanin; pfam00335"
                     /db_xref="CDD:459767"
ORIGIN      
        1 ggcttgaagt agttgagaat tcaatatggc ttgtaagggg tttttggagt gtttattgaa
       61 gctcctaaac ttcttgttaa cgctgttcgg tctcgcaatg gtgggatacg gcgtttacat
      121 gtttgtgatg tacaaaaatg caatggataa tcctgaacct catggagatt tgataccgct
      181 cggtcgccca atgttaatgg ctgtctcgtt gtctaccaat aacatctttg ataacttacc
      241 tactgcttgg tttatttatt tatttgttgg cattggtgct gctattttta tcatatcttg
      301 ttttggttgc attggagcag ctacacgaag tggatgttgc ctaacttgct actctgtcct
      361 agtgatcttg ttaattcttg cggaattggg atgtgctgct ttcatcttct ttgacaaaag
      421 ctggagatcc aatataccag tcgacaaaac cggagatttt gacatgatat acagatttct
      481 ggaaaagaat tggaagatat gcagatgggt tgctcttggg gctgttatat tggaggtaag
      541 ccagtaa
//
LOCUS       XM_071830933             678 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840682), mRNA.
ACCESSION   XM_071830933
VERSION     XM_071830933.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..678
                     /gene="LOC139840682"
                     /note="uncharacterized LOC139840682; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840682"
     CDS             1..678
                     /gene="LOC139840682"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687034.1"
                     /db_xref="GeneID:139840682"
                     /translation="MSWVKWEKILLPHEEGGKHVDGLGISFYNSFIRSIGDGKNTSFW
                     DDIWVGNASFKDRFKRLHRLEIDKDINISSKIEEFKGDGLGNWAYPSMGRTNSELKEL
                     RDTVRNLQLNEDKRGIDLNSVRCPICDGDIEMVEHILFSCQVAKDIWAKVLKWWGYNS
                     AIFGFEDIFNGTFDCVAQDHKKNQWQAVCWVVCYTLWKNRNAKVFKNKLETVPSLFSE
                     VQVLSYN"
     misc_feature    <343..444
                     /gene="LOC139840682"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtcatggg ttaagtggga aaaaatcctt cttcctcacg aagaaggagg aaaacatgtg
       61 gacgggttag ggatttcttt ctataattct ttcatacgct caatcgggga cgggaaaaac
      121 acttcttttt gggatgacat ttgggtggga aacgcaagct ttaaggacag attcaaaaga
      181 ctacacaggc tagagattga caaagatatc aacatcagta gcaaaatcga agaatttaag
      241 ggagatgggc tcggcaattg ggcctatcca tcgatgggcc gaacgaatag tgaactaaaa
      301 gagttgcgtg atactgttcg gaacttgcag ctgaacgaag ataaacgggg catcgacttg
      361 aatagtgtga gatgcccgat ttgtgatggt gacattgaga tggtggagca tatacttttt
      421 tcctgtcaag tggcaaaaga catttgggct aaagttctta aatggtgggg gtataattcg
      481 gctatattcg ggtttgagga tatttttaat ggtactttcg attgtgtagc acaggatcat
      541 aaaaagaatc aatggcaagc ggtttgttgg gtggtttgtt acactctatg gaagaataga
      601 aatgcaaagg tgttcaagaa taagctcgag acggtcccat ctttatttag cgaggttcaa
      661 gttctttcat ataattga
//
LOCUS       XM_071830934            1877 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pyruvate kinase isozyme G,
            chloroplastic-like (LOC139840683), mRNA.
ACCESSION   XM_071830934
VERSION     XM_071830934.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1877
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1877
                     /gene="LOC139840683"
                     /note="pyruvate kinase isozyme G, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 21 Proteins"
                     /db_xref="GeneID:139840683"
     CDS             180..1877
                     /gene="LOC139840683"
                     /codon_start=1
                     /product="pyruvate kinase isozyme G, chloroplastic-like"
                     /protein_id="XP_071687035.1"
                     /db_xref="GeneID:139840683"
                     /translation="MATINLHTPSPAFKSDSDRRLSLAKKLNGSSLSVYEFFNSHHQQ
                     QRVRNYVHSIAVKSMKIDEHSQEAAFSANGPILPSSENSSRLPQISPDAQRKTKIVCT
                     IGPSTSSREMIWKLAETGMNVARLNMSHGDHASHQKTIDLVKEYNAQFEEKVIAIMLD
                     TKGPEVRSGDVSKPILLQEGQEFNFTIKRGVSTNDTVSVNYDDFINDVEAGDTLLVDG
                     GMMSLAVKSKTKDLVTCEVIDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQ
                     VDFYAVSFVKDAEVVHELKDYLKSCNADIHVIVKIESADSIVNLPSILAASDGAMVAR
                     GDLGAELPIEDVPLLQEEIIRRCQNLQKPVIVATNMLESMIDHPTPTRAEVSDISIAV
                     RQGADAIMLSGETAHGKFPLKAVKVMHTVALRTESSSVNTVPPIRKSAYKSHMGEIFG
                     FHAATIANTLPTPIIVFTRTGSMAIILSHYRPFSTIFAFTNEKRVKQRLMLYHGVMPI
                     YMEFSDDAEETFSRALKILVGKSLVKEGQYVTLVQSGAQPIWRKESTHHIQVRVVKD"
     misc_feature    195..1871
                     /gene="LOC139840683"
                     /note="pyruvate kinase; Region: PLN02623"
                     /db_xref="CDD:215334"
ORIGIN      
        1 gcgtttggtc cataattcgc atccgcatca aatgaaatta taccacgata ttccccttag
       61 tgtgggccca gtcaaagtcc aatttcgtgg acgcagccac agcggcagtt gaacaactac
      121 aacaccaatc ccctccgtca ttgacgtcca agttcaaccg tccgatcaat ctctctccga
      181 tggcgacaat caatttacac actccgtcac cggcctttaa gtccgattcc gaccgtcgtc
      241 tctcgttagc caaaaaactc aacggatcat cgctctccgt ttacgaattc ttcaattcgc
      301 atcatcaaca acaacgtgta cggaattatg tgcattcgat tgcagttaag tcgatgaaga
      361 ttgatgaaca cagtcaggaa gccgcctttt ctgctaacgg tcctattttg ccgtctagtg
      421 agaacagttc gaggcttcct cagatttctc cagatgctca aaggaaaaca aagatagttt
      481 gtacgattgg tccttcaacg agctcaaggg aaatgatatg gaagctggct gaaacaggga
      541 tgaacgtggc acgtctaaat atgtcacacg gtgatcatgc gtcacatcag aaaaccattg
      601 atcttgtcaa ggaatataat gctcaatttg aggaaaaagt tatagctata atgttggata
      661 ctaagggacc tgaggtcaga agcggagatg tatctaaacc aatccttctt caggaaggac
      721 aagaattcaa cttcactatt aaaaggggag tgagcacaaa tgacactgtt agtgtaaatt
      781 atgatgactt tataaatgat gtcgaggctg gagatacact actggttgat ggtggcatga
      841 tgtcattggc tgttaaatct aagaccaaag atttagttac gtgtgaagtc attgatggtg
      901 gagaactgaa atcaagaaga catctcaatg tacgcgggaa aagtgccact ttaccatcaa
      961 taacagataa agactgggaa gatataaagt ttggagttga caaccaggtt gatttttatg
     1021 ctgtctcatt tgtgaaggat gctgaagtgg ttcatgagct taaagattat ctcaaaagct
     1081 gcaatgcaga catccacgtg attgtaaaaa ttgagagtgc agactcaata gttaatcttc
     1141 catctatact cgcggcgtct gacggggcaa tggtagcacg tggtgacctt ggtgcagaac
     1201 ttccaattga agacgtacct ttgttgcagg aagaaatcat tagaaggtgc caaaacttgc
     1261 agaaaccagt tatagtagca acgaacatgc tagaaagcat gatcgatcac ccaactccta
     1321 caagagctga agtttctgac atttcaatag cagtacgaca aggtgctgat gccattatgc
     1381 tttctggaga aacggctcat ggcaagtttc cactgaaagc tgtgaaagta atgcacactg
     1441 tggccttaag gaccgaatca agttcagtta acacggttcc tcctatccgt aaatctgctt
     1501 acaagagcca catgggtgaa atatttggtt tccatgctgc aacaatagcc aacacgctac
     1561 ctacaccgat catcgtcttc acaagaacag gctctatggc tatcatttta agccattaca
     1621 ggccattctc gactatattt gccttcacaa atgaaaaacg agttaaacaa agattgatgc
     1681 tttatcatgg tgtgatgccc atctatatgg agttctctga tgatgctgaa gagacctttt
     1741 caagagctct taaaatttta gtgggtaaga gtttggtgaa ggaggggcag tatgttactc
     1801 ttgttcaaag tggagcacaa ccaatttggc gtaaagagtc tactcaccac atacaagttc
     1861 gtgtggttaa agattag
//
LOCUS       XM_071830935             930 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840684), mRNA.
ACCESSION   XM_071830935
VERSION     XM_071830935.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..930
                     /gene="LOC139840684"
                     /note="uncharacterized LOC139840684; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840684"
     CDS             1..930
                     /gene="LOC139840684"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687036.1"
                     /db_xref="GeneID:139840684"
                     /translation="MADPKLFHPAFTVSNIKNHIPFTLELDKSQYTTWAELFKITCQA
                     YDILDHIITSSDSSDSATVYTTSNSATQAAIWSRLDDVVLNWIYGTISIELLNNVFET
                     DSTAAKTWTRIQDMFQDNKNSCALYLQRQFTNIKLDNFPNISAYCQELKSIADQLGNV
                     GDKVTEPRMVLQLIAGLNDNFDTIGSQLAYISPLPSFYQARSMLLLEETRKQKQVLLP
                     STPIDAALIGTTGNSSSDTSSNQPSRGNDYRGRGSNRGSYRGRNSSNRGCGRGRGNYP
                     NSAPAWANQPPRNWQQSPWNYPPACPYPTSSWA"
     misc_feature    250..642
                     /gene="LOC139840684"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    697..>921
                     /gene="LOC139840684"
                     /note="transcriptional regulator ICP4; Provisional;
                     Region: PHA03307"
                     /db_xref="CDD:223039"
ORIGIN      
        1 atggccgatc caaagttgtt tcatcctgcc ttcacagtgt ccaacatcaa aaatcatatc
       61 ccattcacac tcgaactcga caaatctcaa tacacaacat gggctgaact cttcaaaata
      121 acctgccaag catatgatat actcgatcac atcatcacct catccgactc ttctgactca
      181 gccactgtgt acaccacctc aaattcagct actcaggctg ctatttggtc tcgcttggac
      241 gatgtcgtcc ttaattggat atacggtact atttcaattg aattgctcaa caatgttttt
      301 gaaacagact caactgcagc caaaacatgg acacgaattc aagacatgtt tcaggataat
      361 aagaattcat gcgcactgta tctacaacgt caatttacaa atatcaaact tgataacttt
      421 ccaaacattt ctgcctactg tcaggaactt aagtctattg cggatcaact aggcaacgtt
      481 ggtgacaaag ttacagaacc acgaatggtc cttcaattaa tagcaggttt aaacgataac
      541 tttgatacaa tcggatcaca gcttgcttac atctctccgt taccatcctt ttatcaagca
      601 agatccatgt tactcttgga ggagactcgt aaacaaaaac aggttcttct accttccaca
      661 cctattgatg cagctcttat cggtaccact ggaaattcgt cctcagatac atcttcaaat
      721 caaccatcac gtggaaatga ttatcgaggt cgtggcagta atcgtggatc ttatcggggt
      781 cgcaactcaa gtaatcgtgg ttgtggtcgt ggtcgaggta attatccgaa cagtgcaccg
      841 gcttgggcca accaacctcc aagaaactgg cagcagtccc catggaatta tccgccagca
      901 tgcccatatc caacatccag ttgggcttga
//
LOCUS       XM_071830936            1875 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840685), mRNA.
ACCESSION   XM_071830936
VERSION     XM_071830936.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1875
                     /gene="LOC139840685"
                     /note="uncharacterized LOC139840685; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840685"
     CDS             1..1875
                     /gene="LOC139840685"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687037.1"
                     /db_xref="GeneID:139840685"
                     /translation="MRSPSKDAVQRWVKVYQRRSKKSLFGIRAQVATERMHRGGYHRV
                     PLRRNAHRGKEDDPRDAEIDRLNRRIAELEFNRDHDFVGSDSDRSSDLSDTSPFANAP
                     RGFQRGNRDDPLRNLGVKIEIPVKFTGVLQPDDFLDWLSTVERIFDLRDVPEHLKVKL
                     VAIKLRKHASLWWDNVKKNRALAGKSKIETWEKMKKLLKNKFLPGNYRQEAFLEYHAL
                     QQKSLSVEELIREFDKLRIRCDSNEEEEQLIARFLGALNPEISNVVTLQPFSSFNDVC
                     KLALKVEKQLIRGKTRAPFSRFPPVNKASPVTVDKGKREQPSSSAGPNNNANNVRAPR
                     CFKCNGMGHYSRDCPNQRTFTTRDDHDEPKYDTEEDEGDTKLDQEELVYPDQGEALVV
                     HRALNAIPVPTTDEHAWLRNNIFRTRVTTEGKVCNMIIDGGSCENMVSNEMVEKLGLK
                     AEDHPEPYQLTWLKKGNRIKVTKRCLVRFSIGKKYKDEVWCEVIPMDVCHLLLGRPWK
                     FDRRTKHDGNTGPLGSSATTTRSDYTLILSRSEFEHTVKLAPLIFALVVAETNEVADK
                     VPDQVKPLLWEFADVIPEEIPPGLPIMRDVQHCIDLIPGSSIPNKPAYRMNPAEYEEL
                     "
     misc_feature    475..774
                     /gene="LOC139840685"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
     misc_feature    <940..>1059
                     /gene="LOC139840685"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    1000..1050
                     /gene="LOC139840685"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
     misc_feature    1267..1521
                     /gene="LOC139840685"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1291..1293,1297..1299,1303..1305,1378..1386,
                     1504..1506)
                     /gene="LOC139840685"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1291..1299
                     /gene="LOC139840685"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1291..1293
                     /gene="LOC139840685"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1378..1389,1399..1410)
                     /gene="LOC139840685"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgagatcgc ctagtaaaga tgcagttcaa aggtgggtca aggtttacca gcgtcggtcc
       61 aagaagtcat tatttggtat cagagcgcag gttgcaaccg aaagaatgca tcgtggaggt
      121 taccatcgag taccacttcg cagaaacgcc catcgaggca aagaagatga tccaagggat
      181 gctgaaattg atcggttgaa tagaagaatt gctgaactag agttcaatcg tgatcatgac
      241 tttgtgggga gtgattcaga tcgctccagt gatctgtctg atacgagtcc tttcgccaat
      301 gcgccgagag gattccaaag gggtaatcga gatgatccct tacggaacct gggagtaaag
      361 attgagattc ctgtaaagtt tacaggtgtc ttacaaccgg atgattttct tgactggcta
      421 agtacggtgg aacgcatctt tgacttgcgt gacgttcctg agcacttgaa agtcaagtta
      481 gtcgcaataa agttaagaaa gcatgcttcg ttgtggtggg ataatgttaa aaagaatcga
      541 gctttagcgg ggaaatcaaa aatcgagacg tgggaaaaga tgaagaagtt gttaaaaaac
      601 aaatttctac caggaaacta tcgacaagaa gcattcttgg agtaccatgc acttcaacaa
      661 aagtccttaa gtgttgaaga attgattagg gagttcgata agctacgtat tcggtgtgat
      721 tcaaacgaag aagaagagca gttgattgca agatttttgg gagccttaaa tccagaaatt
      781 tcgaatgtgg taactttaca accattctcg tcgtttaatg atgtttgtaa gctagctttg
      841 aaagttgaga agcagttaat cagaggcaaa acccgagctc ctttttcacg atttccacct
      901 gttaacaagg ctagtccagt aacggtagat aaaggaaaac gagaacaacc atcatctagt
      961 gctggtccca ataataatgc taataacgtc cgggctcctc gatgttttaa gtgtaatgga
     1021 atgggtcatt actcacgtga ctgcccaaac caacgcacct ttaccacgcg ggacgatcat
     1081 gacgaaccaa agtatgatac agaagaagat gaaggggaca cgaaactaga tcaggaggag
     1141 ttagtctacc cggatcaagg agaagcgtta gtcgtgcatc gagctttgaa tgctatcccc
     1201 gtacctacaa ctgatgaaca tgcttggcta cgaaataata tttttcgaac tcgggtcacc
     1261 accgagggaa aggtatgtaa tatgattatt gatggtggca gttgcgagaa tatggtatca
     1321 aatgagatgg tggaaaagtt gggtttaaag gcagaagatc atcccgaacc atatcagtta
     1381 acttggttaa agaaaggaaa ccgtataaag gtgacgaaaa ggtgtcttgt tagattctca
     1441 atcgggaaaa aatacaagga tgaggtatgg tgtgaagtta ttcccatgga tgtgtgtcac
     1501 cttcttctag gtcgaccatg gaaatttgat cgacgaacga aacatgatgg taacactggt
     1561 cccctgggat catcggcaac aaccactaga agcgattata cattaatttt aagtcgatcc
     1621 gagtttgagc acacggtcaa attagcacct ttgatttttg cattggttgt tgcagaaaca
     1681 aatgaagttg cggataaggt acctgaccaa gttaagccac tcctatggga atttgcagat
     1741 gttatacccg aagaaattcc tcctggattg ccgataatgc gcgatgtgca acattgcatc
     1801 gacttgatcc caggttcgtc aataccgaat aaacctgcat ataggatgaa cccggcggaa
     1861 tacgaagaac tataa
//
LOCUS       XM_071830937            1608 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides geraniol 8-hydroxylase-like
            (LOC139840688), mRNA.
ACCESSION   XM_071830937
VERSION     XM_071830937.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1608
                     /gene="LOC139840688"
                     /note="geraniol 8-hydroxylase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840688"
     CDS             1..1608
                     /gene="LOC139840688"
                     /codon_start=1
                     /product="geraniol 8-hydroxylase-like"
                     /protein_id="XP_071687038.1"
                     /db_xref="GeneID:139840688"
                     /translation="MISELVVKIYITLITFWSWWLEAENEQDKLARTILTISTPALIF
                     MWYKWMQYYNRNSPIRPLPPGLYGLPIVGYLPFLSSNVHEVFASIAHKYGPVFSLRLG
                     SKLHVVVTSVDVAKVIVREQDHTFANRSPPVTARILAYGVEDIVWSNNTRHWRNMRKL
                     LVSEVLSNTSLNASQIFRKREVRKMVNEVYTKLGDEIDINKLAFDTELNVVTSLLWGS
                     SKFGEGDDLIDNIDRFREVEFKIIKLMGTPNISDFIPMLSRFDLQGMNREMQKQLEYL
                     DQLFDKIIERKTKVNPIEEDGKKDFLQILLNLKDQKDDPTSFNITHVKVLLINILVAA
                     TDTTSTLVEWVMAEILHNPSVMEKVQDELTQFIGATKTLEESDLSKLLYLDAVIKETL
                     RLHPPVPILIPRSPDKSCIVAGYLVPKGTTVFINVWAIHRDPKNWTDPLEFKPERFLN
                     NKWDYNGHNLKYFPFGSGRRICPGIPLGEKMLMYILASLLHSFDWSLPRGDKLELSDE
                     FGFVTKKRKPLIAIPTQRLSDANLYYD"
     misc_feature    268..1569
                     /gene="LOC139840688"
                     /note="cytochrome P450 family 76 and similar cytochrome
                     P450s; Region: CYP76-like; cd11073"
                     /db_xref="CDD:410696"
     misc_feature    order(385..387,433..438,460..462,472..474,496..498,
                     631..633,988..990,997..1002,1009..1014,1189..1191,
                     1201..1206,1210..1212,1390..1401,1408..1422,1429..1434)
                     /gene="LOC139840688"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410696"
     misc_feature    order(403..405,439..441,721..723,733..735,817..819,
                     985..987,994..999,1204..1206)
                     /gene="LOC139840688"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:410696"
ORIGIN      
        1 atgatatcag aacttgtagt taagatttat attactctta tcaccttctg gtcatggtgg
       61 ttagaagccg aaaacgaaca agacaagctt gctcgcacga ttctcaccat ttctacacca
      121 gcactaatat ttatgtggta taagtggatg cagtactaca acagaaacag cccaataaga
      181 cccctaccac cgggtctata cggattacca atcgtaggat acctcccgtt tcttagctcc
      241 aacgtgcatg aagtattcgc ttcgattgct cataaatacg ggcccgtctt tagtctacgg
      301 ctaggaagta agcttcatgt tgtggtgacc tctgttgacg tagcaaaagt tatagttcgt
      361 gaacaggacc acacctttgc taaccgaagt cctcctgtca cagcacggat cctagcttat
      421 ggtgtagaag acattgtttg gtccaacaac actagacact ggcgtaacat gcgtaagctt
      481 ttagttagcg aagttctaag taacacaagt ctcaatgcta gtcagatatt tagaaagcgt
      541 gaagtcagaa agatggtgaa cgaagtttac actaagcttg gggatgaaat cgatattaac
      601 aaattagctt ttgatacaga gcttaatgtt gtaaccagtt tgttatgggg ttctagcaaa
      661 tttggtgaag gtgatgattt gattgataac atagataggt ttcgagaagt tgagttcaag
      721 attattaagc taatgggaac accaaacata tctgatttta tcccaatgtt atcaaggttt
      781 gatctacaag gaatgaatag agaaatgcaa aagcaattgg aatatcttga tcagctattt
      841 gacaagatca ttgaaagaaa aactaaagtg aacccaattg aagaagatgg aaaaaaggac
      901 tttctgcaga tcttattaaa ccttaaagac caaaaagatg atccaacatc ttttaacatc
      961 actcatgtta aggtcttact tattaatata ctggtagcag caacagacac aacatcaaca
     1021 ctggttgaat gggttatggc agagatcttg cataatccaa gtgtaatgga aaaggttcaa
     1081 gatgaactga cacagttcat tggtgctaca aagacacttg aagaatctga tctctcaaaa
     1141 ttattatatt tggatgcagt catcaaagag acactaagac tacacccacc agttcctata
     1201 ctaattccaa gatccccaga caaatcttgc attgtggcag gatacttggt tccaaagggt
     1261 acgaccgttt ttataaatgt ttgggcaatt catcgggatc ccaaaaactg gacggatccg
     1321 ttggagttca agcccgagag gtttttaaac aacaaatggg attacaatgg acataacttg
     1381 aagtattttc catttggatc cgggagaaga atatgcccag gtatcccact tggagaaaag
     1441 atgttgatgt atatattagc atctctcttg cattcttttg attggagctt gcctagaggt
     1501 gacaagttgg agctttctga tgagtttggg tttgtgacga agaaaagaaa acctctaata
     1561 gctataccca ctcaaagatt atctgatgca aacctctact atgattaa
//
LOCUS       XM_071830938            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840689), mRNA.
ACCESSION   XM_071830938
VERSION     XM_071830938.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139840689"
                     /note="uncharacterized LOC139840689; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840689"
     CDS             1..1035
                     /gene="LOC139840689"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687039.1"
                     /db_xref="GeneID:139840689"
                     /translation="MVDAERVGQRRKCNDYQDWELIQISFPPLMSIDTANEPIIIKCR
                     IPDHGIQIKRMHVDTGSGVDIMYGHCYHFLPVEVKVQLSQPDITLSGFSGESSWPLGH
                     IELVVELADAKNPQLVRSELIDFYVVRSTSCYNVLLGRNFIRLFNIIPSVVHGLIKFP
                     TMGGIATIASHQATELCGSVVHVSIPSIGEQLKSSAVIANRLHSDKQIKIGAGLSAET
                     KAKLHGILSANTDVFAWQESDMTGVPRDIAEHKLNVNPSLTPVRQKKRHMALERSDWL
                     CAEVDNFVRANILRKVRYQTWVANPVLVKKADGNWRMCVNFKDINKACPKDNYPLSEI
                     DWKVESLSGF"
     misc_feature    121..432
                     /gene="LOC139840689"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(172..174,178..180,184..186,265..273,409..411)
                     /gene="LOC139840689"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    172..180
                     /gene="LOC139840689"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    172..174
                     /gene="LOC139840689"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(265..276,286..297)
                     /gene="LOC139840689"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    862..>1029
                     /gene="LOC139840689"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggttgacg cggaaagagt cggtcaacga agaaagtgca atgattacca ggattgggaa
       61 ctcattcaaa tttcattccc tcctttaatg tcaatagaca cagctaacga acctatcatc
      121 atcaagtgtc gcattcctga tcacggtata cagatcaaac gcatgcatgt tgataccggc
      181 agtggtgtcg acattatgta cggacattgc tatcattttc ttcccgtaga agtcaaagtg
      241 cagttaagcc agcccgatat tacgctatca ggattctctg gggaaagctc atggccgctt
      301 ggtcacatag agcttgtagt agagcttgcg gatgccaaga atccgcagct ggttagaagc
      361 gagttaattg acttttatgt ggtccgttcg acttcgtgct acaatgtgct tctggggaga
      421 aatttcatac gactttttaa cattataccc tcagtagtgc atggcttgat caagtttcct
      481 accatgggtg gaattgctac aattgcgtca catcaagcaa ccgagttatg tggttcagtt
      541 gtgcatgtaa gcattcccag cataggagaa cagcttaaaa gcagtgcagt catagctaac
      601 cgcttgcatt cggacaagca aatcaaaatt ggcgcaggct tgtcagccga aactaaggct
      661 aaattgcacg gtatattgtc cgctaacaca gatgttttcg catggcaaga atcagacatg
      721 acaggggtcc cgcgggacat tgcggaacat aagttgaatg ttaatccgtc acttacaccc
      781 gtcaggcaga agaagcggca tatggccctt gagcgcagtg attggttatg cgcagaagtt
      841 gataattttg tcagagcaaa cattttgcgg aaagtgcggt accagacatg ggttgctaac
      901 cctgtattag tgaaaaaagc tgatggtaac tggcggatgt gcgttaattt taaggacatt
      961 aacaaagcgt gtcctaaaga caattaccct ctctcggaga ttgactggaa ggtagagtcg
     1021 ttgtcaggtt tttga
//
LOCUS       XM_071830939             738 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840690), mRNA.
ACCESSION   XM_071830939
VERSION     XM_071830939.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..738
                     /gene="LOC139840690"
                     /note="uncharacterized LOC139840690; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840690"
     CDS             1..738
                     /gene="LOC139840690"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687040.1"
                     /db_xref="GeneID:139840690"
                     /translation="MAENDRSLTVREQGTVPIQCPKLTETNYTTWSIMIETVLRAYGH
                     WDAITEDEVDEKKNYTTKGAELVQKARLQTLRNEFQMLKMKDNESINDFSGKINSIVA
                     KFKSLGSTLEEEVIVRKFLNSVPMKYLPIVAPIEQYLDLAKIPFEEAVGRVKAYEERF
                     QGHEEKDEEQNKLLLASEQRYGESSGRGRGRGRSYGRGRGRGSGRGDKSGFRFYECGE
                     YGHFKNECTNWNDKEVNLIPEEEPTLL"
     misc_feature    67..144
                     /gene="LOC139840690"
                     /note="Domain of unknown function (DUF4219); Region:
                     DUF4219; pfam13961"
                     /db_xref="CDD:433608"
     misc_feature    <205..489
                     /gene="LOC139840690"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggcagaaa acgaccgatc tctaaccgtt cgtgagcaag gaaccgtacc aattcaatgt
       61 cctaaattaa ccgagaccaa ttacaccaca tggtctatta tgatcgaaac cgtgctaagg
      121 gcatatggac attgggatgc aataaccgaa gatgaagttg atgagaagaa aaattatact
      181 accaaagggg ctgaattggt tcaaaaggca aggttgcaaa cgttgagaaa cgaattccag
      241 atgctaaaaa tgaaggacaa cgaatcaatc aatgactttt cgggcaagat aaatagtatc
      301 gttgctaaat tcaaaagtct tggttctact cttgaagagg aggtgattgt aagaaagttt
      361 ctcaattcgg ttccaatgaa atacttgcca attgtagctc ccattgaaca atatttggac
      421 cttgctaaaa taccatttga agaggcggtt ggaagggtga aagcttatga agaaagattt
      481 caaggtcatg aagaaaaaga tgaagaacaa aataaacttt tgttggcaag tgaacaaagg
      541 tatggtgaaa gcagtggacg cggaaggggg cgtggaagga gctatggtcg aggccgagga
      601 agaggctcgg gtcgaggtga caagagtggt tttaggttct atgagtgtgg agagtatgga
      661 cacttcaaaa atgaatgcac aaattggaac gacaaagaag ttaacttgat tcctgaagaa
      721 gaaccgacac tcctttga
//
LOCUS       XM_071830941             918 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840691), mRNA.
ACCESSION   XM_071830941
VERSION     XM_071830941.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..918
                     /gene="LOC139840691"
                     /note="uncharacterized LOC139840691; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139840691"
     CDS             1..918
                     /gene="LOC139840691"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687042.1"
                     /db_xref="GeneID:139840691"
                     /translation="MSSSSSSSGDSFTKYTINVIENLSDEEEVNSRRYIRRNHYEAHD
                     RLMDDYFNEGCKYSADNFKRRFRMRRRVFLRIMNDILSYAANPLPYYFRWFHRRKDSC
                     GKWSIRPHLKMTAALRQLAYGYTPDALDEYLQMSERVMKGFMVEAVASYDNWIWHAYF
                     GVAGSNNDINVLNTSDLFNSMLNEEMPDVPYEINGVHYSRWYYLADGIYPTWAAFVKG
                     FSSAVDEKRTYFTKKQASAHKDVERTFGILQGRWHILQQPARAYEVNIMRQLMYTCIV
                     IHNIIIEDNGCNLAENDWVVEPVQHIQRT"
     misc_feature    <436..858
                     /gene="LOC139840691"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcgtctt cttcgagttc ttccggcgac tcgttcacga agtacacaat aaacgtaatt
       61 gaaaatttat ccgatgaaga agaagttaac tcacgtcgtt atatacgtcg aaatcattat
      121 gaagcacatg atcgtttgat ggacgattat tttaacgagg gttgcaaata ttcggctgat
      181 aatttcaaac gaagatttcg aatgcggcga cgtgtttttc ttaggattat gaatgatatc
      241 ctaagctacg cagcaaatcc attgccgtat tattttagat ggtttcatcg aagaaaagat
      301 tcatgtggta agtggagtat taggccacat ttgaagatga cagccgcgct acgtcagcta
      361 gcatacggtt atacaccgga tgcgttggat gagtatcttc aaatgtccga acgagtcatg
      421 aaaggattca tggttgaagc ggtcgcctcg tatgataatt ggatttggca tgcgtatttt
      481 ggtgtagcgg gttcaaataa cgatattaat gtgctaaaca ctagtgattt gttcaactca
      541 atgcttaatg aggaaatgcc ggacgttcct tatgaaataa acggggttca ttatagcagg
      601 tggtattatt tagctgacgg catttaccca acttgggcgg catttgttaa gggattttca
      661 agtgccgttg acgaaaaacg tacttacttt acaaagaaac aagcgagtgc tcacaaagat
      721 gttgaaagaa cgtttgggat ccttcaaggc cgttggcata ttcttcagca acccgcacga
      781 gcttacgagg tgaatataat gagacaacta atgtacacat gcatcgtgat acacaacatc
      841 attatcgaag acaatggatg caaccttgct gagaatgatt gggtagttga gcccgtccaa
      901 catatacaac gtacgtga
//
LOCUS       XM_071830942            2058 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides acid
            beta-fructofuranosidase-like (LOC139840692), mRNA.
ACCESSION   XM_071830942
VERSION     XM_071830942.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2058
                     /gene="LOC139840692"
                     /note="acid beta-fructofuranosidase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins"
                     /db_xref="GeneID:139840692"
     CDS             1..2058
                     /gene="LOC139840692"
                     /codon_start=1
                     /product="acid beta-fructofuranosidase-like"
                     /protein_id="XP_071687043.1"
                     /db_xref="GeneID:139840692"
                     /translation="MKSKPTSDVENPTETTSLLAADHGYVPSLDANQENDDQQPSKPV
                     LLLISGLLAIGLLAALIIGNVHIPESENNVPFFERMNPVEQGVSEKSFKLPYNASSFS
                     WADNMLSWQAPSFHFYPGENWMNDPNGPVFYKGWYHLFYQYSPEAAVWGPIVWGHAVS
                     RDMVHWRHLPIAMERDKWYDVNGVWTGSTTILPNNKLLVLYTGSTNESVQVQCLAYPA
                     NPSDPLLVNWIKAPANPVMVPPPGIGIKDFRDPTTAWLTPEGKWRTVIGSKVNKTGIV
                     LIYDTKDFLNYDLKNEWLHQVAGTGMWECVDFYPVSKNEFGLDTGVIGPDVKHVLKAS
                     MDDDRCDYYAIGKYDPVKGKWTPDDPKIDVGYGLRYDYGIYYASKTFYDQNKKRRILW
                     SWIKETDSEKSDIKKGWASLMAIPRTVALDPATGSNLLQWPIEEMEKLRSNLIEFSDV
                     KLETGSLIPLNVGPTSQVDIMVEFELDKEVANSLRIGAGVPYNCAGHGGAGVRDALGP
                     FGITVLANKNLTEHTPAYFYIAKDKGGDLTTFFCFDQSRSSMAKDVDKSIYGSTVPVL
                     KGEKLSMRILVDHSIVEGYAQGGRTCITSRAYPTEAINNDAKVFLFNNATKVNVTASL
                     KIWQMGLSSRNESGWVWLGPSLILLVVFWFVRPDSRKSSIKNDENLVLFLHTTNKASL
                     GFT"
     misc_feature    346..1767
                     /gene="LOC139840692"
                     /note="Glycosyl hydrolases family 32; Region: Glyco_32;
                     smart00640"
                     /db_xref="CDD:214757"
ORIGIN      
        1 atgaaatcca aacctacatc tgatgtcgaa aacccaaccg agacaacctc tcttctagca
       61 gccgatcatg gttatgtccc atcgttagac gcaaatcaag aaaacgatga ccaacaaccc
      121 agtaaaccag ttcttcttct gatatctggg ttgttggcca ttggcttgtt ggcggcttta
      181 attatcggaa atgtacacat tcctgaaagt gaaaacaatg tgccattttt tgagaggatg
      241 aatcctgtcg aacaaggtgt atctgagaaa tcgttcaaat taccgtataa tgcatcttct
      301 ttttcatggg cagataacat gttaagttgg caagcaccct catttcattt ctatccagga
      361 gagaattgga tgaacgatcc aaatggtccg gtgttttata agggatggta ccatttattt
      421 taccaatata gtccagaggc cgctgtgtgg ggcccaattg tgtggggtca tgcggtatcg
      481 agagacatgg ttcattggag acacctcccc atagcaatgg aaagagacaa atggtatgat
      541 gtaaatggtg tatggaccgg gtcaacaacc atccttccaa ataataaact tcttgtactt
      601 tacaccggtt cgacaaatga atcggttcaa gttcaatgct tagcatatcc agccaaccca
      661 tctgaccctc tcctagttaa ttggattaag gcccctgcta acccggtcat ggtcccacca
      721 ccggggattg gtataaagga ctttcgtgac cccaccactg catggctcac cccggaaggg
      781 aaatggcgga cagtgatcgg gtcaaaagta aataaaaccg gaattgtgtt gatatatgac
      841 accaaggatt tcttaaacta tgatctgaaa aacgaatggc ttcatcaagt tgcgggcact
      901 ggaatgtggg aatgtgttga tttttacccg gtttctaaaa atgagtttgg gcttgatacg
      961 ggggtgattg gccccgatgt gaaacacgta cttaaagcta gtatggatga tgatagatgt
     1021 gattattacg caattggaaa gtatgatccg gttaaaggta aatggacccc ggatgatcct
     1081 aaaatcgacg ttggctatgg tttgcgatat gattatggga tttactatgc gtcgaaaaca
     1141 ttttatgacc aaaataagaa aagaaggatt ttgtggagct ggattaagga aaccgatagc
     1201 gaaaagtcag atatcaaaaa gggttgggca tctcttatgg caattccaag aactgttgca
     1261 cttgatccag caaccggtag caatttgctt caatggccaa ttgaggagat ggagaaactt
     1321 agatcaaatc ttatagagtt cagcgacgtt aaacttgaaa ctggctcact gattcctcta
     1381 aatgtaggcc caacatctca ggtggatata atggttgagt ttgagctaga taaggaggtt
     1441 gctaatagtt tacgcatagg agccggtgtg ccatataatt gcgctggaca tggtggagct
     1501 ggcgtaagag atgcattagg cccgtttggt ataacggttc ttgcaaacaa gaacttaacc
     1561 gaacacaccc ctgcttactt ctacattgcc aaagacaagg gtggagacct cactacattc
     1621 ttttgctttg atcaatcgag atcttccatg gcaaaggatg tcgataagtc tatttatggt
     1681 agtacagtcc ctgtccttaa aggcgaaaaa ctctccatga gaatattggt ggatcattcg
     1741 atagtcgaag gttacgcaca aggaggaaga acatgcatta cctcacgagc ttacccaacc
     1801 gaggcgatta acaatgatgc taaagtgttc ttattcaaca atgctactaa agttaatgtg
     1861 actgcttccc tcaagatatg gcaaatgggg cttagttcaa ggaatgaaag tggatgggtt
     1921 tggctaggcc cgtcgttgat cttacttgtc gtcttttggt ttgtgagacc ggattcgaga
     1981 aaaagttcga tcaaaaacga tgaaaacttg gttttgtttt tgcatacaac aaataaggct
     2041 agtttaggct tcacttag
//
LOCUS       XM_071830943            1071 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides metalloendoproteinase
            1-MMP-like (LOC139840694), mRNA.
ACCESSION   XM_071830943
VERSION     XM_071830943.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1071
                     /gene="LOC139840694"
                     /note="metalloendoproteinase 1-MMP-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139840694"
     CDS             1..1071
                     /gene="LOC139840694"
                     /codon_start=1
                     /product="metalloendoproteinase 1-MMP-like"
                     /protein_id="XP_071687044.1"
                     /db_xref="GeneID:139840694"
                     /translation="MYRYFRYNIFSIFLTFSFLQCVFPARTVPPTSLPELPVNYLLKQ
                     DTWHKFSKFLDAGKGANFSGMSELKKYFHRFGYIDNIENFTDTFDDTLETAVINYQIK
                     LGLPVTGKLDSGTVNQIMSPRCGVSDDIFRIHNNIHVSKHYAFFNGEPRWAPRTLTYA
                     FSDRNMIDYLSFSDIKGVFQRSFAKWASIIPLNFTEVEDDRTSDIKIAFYRGDHGDGE
                     PFDGVLGLLAHAFSPENGRLHLDKDETWAIDLRSSGSNVAIDLESVATHEIGHILGLA
                     HSSVKEAIMYPSLGPRTQKRDLKLDDVKGIQMLYGSNPNFRYTPSMESDINSGYRSGR
                     VRWVKWVILLRVLVLFVQFSFE"
     misc_feature    199..357
                     /gene="LOC139840694"
                     /note="Putative peptidoglycan binding domain; Region:
                     PG_binding_1; pfam01471"
                     /db_xref="CDD:460223"
     misc_feature    451..933
                     /gene="LOC139840694"
                     /note="Matrixin; Region: Peptidase_M10; pfam00413"
                     /db_xref="CDD:425668"
ORIGIN      
        1 atgtaccgtt atttccgtta caacattttt agtatatttc ttactttctc tttcctccaa
       61 tgtgtttttc ccgccagaac cgttcctccg acatcactac cggaattacc cgtcaattac
      121 ctcctaaaac aggacacgtg gcacaaattc tcaaagttct tggacgccgg caaaggtgct
      181 aatttttctg gtatgtcgga gctcaaaaaa tacttccatc gtttcggtta catagataac
      241 atcgaaaact tcaccgatac attcgacgac acactcgaaa ccgcggtaat aaactatcaa
      301 ataaaactcg ggttaccggt caccggaaaa ctcgattccg gcaccgtcaa tcaaataatg
      361 tcaccccggt gtggtgtatc cgatgatatt tttagaattc ataacaacat tcatgtaagt
      421 aaacattatg cgttttttaa tggtgaaccg aggtgggccc cacgaacgct aacatacgct
      481 ttttcggatc gcaatatgat agattacctt agtttttcgg atataaaagg tgtttttcaa
      541 cgttcatttg caaagtgggc gtctataatt ccgttaaact tcacggaagt ggaggatgat
      601 cgtacgtcgg atataaagat agctttttat cgaggtgatc acggtgatgg tgaaccgttt
      661 gacggcgttt taggattgtt ggcccatgca ttttcgccgg aaaatggtag gcttcattta
      721 gataaagatg aaacatgggc tattgattta aggtctagtg gatcaaatgt agctattgat
      781 ttggaatcag ttgctactca tgaaattgga catatactcg ggttggccca ttcgtcggtt
      841 aaagaagcga ttatgtaccc gagcttgggt ccgaggacac aaaaacggga tcttaaattg
      901 gatgatgtaa aggggattca aatgctatat gggtcaaatc caaattttcg gtatactcct
      961 tctatggagt cggatattaa ttcgggttat cgatccggga gagtaagatg ggtcaagtgg
     1021 gtgattttat tacgagtatt ggttttattt gttcagtttt catttgaatg a
//
LOCUS       XM_071830944            1944 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840695), mRNA.
ACCESSION   XM_071830944
VERSION     XM_071830944.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1944
                     /gene="LOC139840695"
                     /note="uncharacterized LOC139840695; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840695"
     CDS             1..1944
                     /gene="LOC139840695"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687045.1"
                     /db_xref="GeneID:139840695"
                     /translation="MSKHPTQPNSSPGQDFMNALFNNSMAMSPANSSSAHQGSSSSPA
                     SQPPLQQHYYPQGPPFQQPYYPQTSFQQPFHQPYYSQPPFPQTPYQQMCYPQRPMNET
                     QYVEVETPPNEANIYPNSETENVDEVIPETQQESSRIKNKGKEKVVEKKSRISQRGIT
                     RTPWSAYEEKVLAERWVDATQNPIIGNSQTSASFWKAIPSDTEYDSDFEMLNDVVALN
                     PQTLYLNLVSLEDSDDEEEEAESSIRPKISRRHLNRDRKETAQRLWNDYFSESPVFPG
                     DYFRNRYRMSRALFLRICNGILSYSQEPLPKYFHFFHQRHDATGKPGFNIYQKCTSAI
                     RQLAYGCAPDLFDEYLHMGQQTSYDCLDNFCKCVFHLLSHEYLRKPNYYDIQRLYHAH
                     AQLHGFSGMLGSIDCMHWAWKNCPIAWKGQYTRGDHGHCPTIMLEAVASYDLCDVTLW
                     IWHAYFGPAGSNNDINVLNQSDLFNELLEDTAPIAPFIVNGVTYNKGYYLADGIYPEW
                     ATLVKSFKCPVEPKNVKFKKFQEAARKDVERAFGVLQGRWAILKNPARPYSVNKIRRI
                     MYTCVILHNMITEDNGRNLCNLEEDYLGNGRNRPQRSWRERVETRERMAKELRDRVVH
                     HSLRNDLIEHIWTLPNNLRARNA"
     misc_feature    <148..>354
                     /gene="LOC139840695"
                     /note="DNA translocase FtsK; Provisional; Region:
                     PRK10263"
                     /db_xref="CDD:236669"
     misc_feature    1123..1746
                     /gene="LOC139840695"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtctaaac accctacaca acctaattcg tcaccgggtc aagattttat gaatgctttg
       61 tttaataact caatggcaat gtcacccgcc aattcttctt ccgcgcatca agggagtagt
      121 tcgtcaccgg ctagtcaacc accgttacaa caacactact acccacaagg accaccattt
      181 caacaaccgt attatccaca aacatcattt caacaaccat tccatcaacc gtattattca
      241 caaccaccat ttccacaaac accatatcaa caaatgtgtt atccacaacg accaatgaac
      301 gaaacacaat atgttgaagt tgaaactcca cctaacgaag ccaacatata tccgaatagt
      361 gaaaccgaaa atgttgatga agttattcca gaaactcaac aagaaagttc aagaataaaa
      421 aataaaggaa aagaaaaagt ggtcgagaaa aagtctagaa taagtcaaag agggataacg
      481 cgtacaccgt ggtccgctta tgaagagaaa gttttagccg aacgttgggt tgatgctacc
      541 caaaatccga tcattggaaa ttcgcaaaca agcgcatctt tttggaaggc gataccgagc
      601 gataccgagt atgattcaga ttttgagatg cttaacgatg tagtagcgtt aaatccgcaa
      661 acgttatatt taaaccttgt aagtttagag gatagtgatg atgaagaaga agaagcggag
      721 agttctataa ggccaaagat ttcacggagg catttaaata gagatcgtaa agaaacggcc
      781 caacgattat ggaatgacta tttttcggag tctccagttt ttcctggaga ttacttcaga
      841 aatcgataca gaatgagccg agctctattt cttcgtatat gtaatggtat attatcttac
      901 tctcaagaac cacttcctaa gtattttcat tttttccatc aacgacacga tgccaccgga
      961 aaacctggct ttaatattta tcaaaaatgc acatctgcta tacgtcaatt ggcgtatggt
     1021 tgcgcacctg acctatttga tgagtattta catatgggac aacaaacgtc atatgattgt
     1081 ttggataatt tttgtaaatg tgtttttcat ctattatcac acgagtattt gcgaaaacca
     1141 aactactatg acatccaacg tttgtatcat gcacatgccc agttgcatgg tttttcggga
     1201 atgctcggta gcatcgattg tatgcactgg gcatggaaaa attgtccaat agcatggaaa
     1261 ggccaatata caaggggtga ccatggacac tgcccaacaa taatgcttga agcggttgcc
     1321 tcatacgatc tgtgtgatgt tacactatgg atttggcacg cttattttgg tcccgctggt
     1381 tcaaacaatg atataaatgt attaaatcaa tcggatttgt tcaatgagtt actagaagat
     1441 acagctccaa ttgcaccatt cattgttaac ggtgttactt acaacaaagg ttattacctc
     1501 gcggacggga tttatccgga atgggcgaca cttgttaagt cctttaaatg tccagttgag
     1561 ccaaagaatg tcaagtttaa aaagtttcaa gaagctgcaa gaaaagacgt ggaacgtgca
     1621 tttggtgttc tccaaggtcg ttgggccatt cttaaaaatc ctgcacgacc atatagtgta
     1681 aacaaaatac gtagaatcat gtacacatgt gtgatactac acaatatgat taccgaagat
     1741 aacggacgca atctatgtaa tttggaagaa gattatcttg gaaatggtcg caaccgacca
     1801 caacgttcgt ggagggagag ggttgaaaca cgcgaacgta tggctaaaga gttgcgtgat
     1861 cgggttgttc atcattcact acgaaacgat ctaattgaac acatttggac gctaccgaat
     1921 aatctccgtg ctcgaaatgc ataa
//
LOCUS       XM_071830945             732 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840696), mRNA.
ACCESSION   XM_071830945
VERSION     XM_071830945.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..732
                     /gene="LOC139840696"
                     /note="uncharacterized LOC139840696; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840696"
     CDS             1..732
                     /gene="LOC139840696"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687046.1"
                     /db_xref="GeneID:139840696"
                     /translation="MEGSKWLVKWNWVREVSGRARNELCELSGLLSSFGLSPDQRDRW
                     AWSPGSKGCFTANRLSSLLDERLMPTTNSSAVTLRNNFIPKKVELFVWRTRKGRLPIL
                     PELDKRGIDLNSVRCPICDDDIESLDHSLFACKISKEIWVRVFNWWNMGNITSHGIRD
                     LLIGDVGQNVTEVGKLIWQGVIWTGCYLIWKNRNEKVFKNKCWNVPVAVSEIQVKSFD
                     WIAKRCKAKDIVWLDWLHNPWSYLI"
     misc_feature    <238..420
                     /gene="LOC139840696"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaagggt caaaatggct tgtaaaatgg aattgggttc gtgaagtttc aggacgtgca
       61 agaaatgaac tatgcgagct tagcgggctg ctgtcttcgt ttggtttgag cccagatcag
      121 cgggacagat gggcctggtc tccaggttcg aaagggtgtt tcacagcaaa ccgtttatcc
      181 tccttgctgg acgaaagact gatgcctacg acgaattcca gtgcggttac attgaggaat
      241 aattttattc ctaaaaaagt agaattattt gtatggagaa cgagaaaggg cagacttcca
      301 atcctacccg agctcgacaa aaggggtatt gatctaaact cggtacgttg ccccatttgc
      361 gatgatgata tcgagtcttt ggatcattcc ctatttgcgt gtaaaatatc aaaagagatt
      421 tgggttcgag tttttaattg gtggaatatg ggaaatataa caagtcatgg tattcgggat
      481 cttttaattg gtgatgtggg acaaaacgta acggaggtgg gaaaactaat atggcagggg
      541 gttatttgga cgggttgcta tctaatttgg aagaatcgaa atgagaaagt attcaagaat
      601 aagtgttgga acgttccggt cgcggttagt gaaattcaag ttaaaagttt cgattggatc
      661 gcgaagagat gcaaggcgaa ggatatcgta tggcttgatt ggctacacaa cccatggagt
      721 taccttattt ag
//
LOCUS       XM_071830946             594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840697), mRNA.
ACCESSION   XM_071830946
VERSION     XM_071830946.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..594
                     /gene="LOC139840697"
                     /note="uncharacterized LOC139840697; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840697"
     CDS             1..594
                     /gene="LOC139840697"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687047.1"
                     /db_xref="GeneID:139840697"
                     /translation="MEMMKLMGFGEKWRKWMFACLSSASISILVNGSPTSEFKLERGV
                     RQDDPLSPFLFIIAAEGLNWLTKAAVRSNLFSGVEVGRDNIPISHLQYADDTIFFVGT
                     FPYIYLGLPVGANMNKKTNWKPVLDKFEKRLADWKARAMSFGGRLTLVNSILNSLPLY
                     YFSLFRAPSSVLKKLESVRRIFFWGGDFFFFWLNGIM"
     misc_feature    <127..>300
                     /gene="LOC139840697"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    139..141
                     /gene="LOC139840697"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggaaatga tgaaactcat gggctttggg gaaaagtgga ggaaatggat gtttgcgtgt
       61 cttagctcgg catcgatctc gatattagtt aatggatctc ccactagtga atttaaactt
      121 gaacgggggg taagacaaga cgatccactt tcaccttttc tgtttatcat tgcggcggag
      181 gggcttaatt ggcttacaaa ggcggcggtt cggtccaacc tattttcggg agtggaggtg
      241 ggacgtgata acatcccgat ctcccatctt caatacgcgg atgatacgat tttctttgtc
      301 ggtactttcc catatatata tcttgggctc ccggtgggtg cgaacatgaa taaaaagacc
      361 aattggaagc cggttttaga taaatttgaa aaaaggcttg cagattggaa agcccgtgcg
      421 atgtcttttg gtggaaggtt gactctcgtt aattcgattc tcaatagctt gccgttgtac
      481 tacttctcgc tctttcgcgc tccgtcctct gtacttaaaa aactcgagag tgtaagacgt
      541 attttctttt ggggagggga tttttttttt ttttggttaa atgggataat gtga
//
LOCUS       XM_071830947             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840698), mRNA.
ACCESSION   XM_071830947
VERSION     XM_071830947.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139840698"
                     /note="uncharacterized LOC139840698; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139840698"
     CDS             1..813
                     /gene="LOC139840698"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687048.1"
                     /db_xref="GeneID:139840698"
                     /translation="MVDVLEITNDLNTILQRKDQDIVNAMHQVRGSKTRLQCIRDNGW
                     ELLLEKLSLFCEKNNIENTNMDDPFYDGISRRRGSHVSSLHHYQVDVFYAVIDMQLRE
                     LNYLFNEVNTTLLISMASLNPSKSFKAFQVEDLIKMADFYPSEFLKHELGFLRGQLTN
                     YINDVRGDERFSDLKGIGHLAKMMVETNKSIIYPKVYLLLKLALIVPVVTSTVERAFS
                     AMKLIKNDLRNKLGDQFMNDCILSYIEKEVLDDISNEAIMDEFYRMKPRRQM"
     misc_feature    <562..741
                     /gene="LOC139840698"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggttgatg tcttggagat cacaaatgat ttgaacacaa tattgcaaag aaaagatcaa
       61 gacattgtaa acgcaatgca tcaagtgagg ggttctaaga caagacttca atgtataaga
      121 gacaatggat gggaactact tttagagaag cttagtttgt tttgcgaaaa aaataatatc
      181 gagaatacga atatggatga cccattttat gatggcataa gtcgtcgtag aggttcacat
      241 gttagttcat tacaccacta ccaagtggat gtattttatg cggtcattga tatgcaactt
      301 cgagagctaa actatctttt caatgaggtg aacacaacat tacttatttc tatggcttct
      361 ttgaacccaa gtaagtcgtt taaagcattt caagtggaag atcttattaa aatggccgat
      421 ttctatcctt cagagttcct aaaacatgag cttggatttc ttagaggaca acttacgaat
      481 tacattaatg atgtacgtgg tgatgaaagg tttagtgatt tgaaaggaat tggacacctt
      541 gcaaagatga tggttgaaac aaacaagagt ataatatatc cgaaggtgta tcttcttttg
      601 aaacttgcat tgattgtgcc cgttgtaaca tctaccgttg agcgtgcatt ttcagcaatg
      661 aagttaataa agaacgattt gcgaaacaaa ttgggagatc aatttatgaa tgattgtata
      721 ctttcatata ttgagaaaga agttttagat gatattagca atgaagcaat tatggatgaa
      781 ttttatcgta tgaaacctcg tcgacaaatg taa
//
LOCUS       XM_071830948            1800 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840699), mRNA.
ACCESSION   XM_071830948
VERSION     XM_071830948.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1800
                     /gene="LOC139840699"
                     /note="uncharacterized LOC139840699; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840699"
     CDS             1..1800
                     /gene="LOC139840699"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687049.1"
                     /db_xref="GeneID:139840699"
                     /translation="MKKPFLFLSLLIPGPSAPDNNIDVYMQPLVDELKELWDIGVNTY
                     DASTKSYFTLRASLLWTVSDFPAYANLLGGSTKGKLACPSSHKETRSTRLSNSHKEIF
                     MAHHHWLELLHPFCMDKYSFDGTEEHEGPPRSLTGEQVLAELKGFKIKFGKLVKDNPS
                     LPYNWKKRNGKTKDHLKGRRDLEEMGIRHELHPEPLSNGKVYLPPACFEMDKKEKDKF
                     CNVLKEVKVPDGYAANISRCIQQLLPVAIRNILPKHVRSVIMKLCRYYRQLCSKVLNP
                     NDLFKMEKVIGKILCDLEKIFPPSFFDVMIHLSVHLASEARLGGPVFREHLNILSHQN
                     PKKRKRDNQHLHSQEFEEWLSDYVDEDMTSCRDNRITSDIETLANGPSEVVKKYKGYI
                     INGFRFHIKDVEKNRTTQNSRVIVQALTSSFSSARDNDPIVGDVTYYGVLNDIIELQY
                     GDEKKVVLFHCDWISSGSRIKVYENGFTTLNFRGLKQTKEPYILASQAQVFYVADPVC
                     KDWKVVIKTTPRDNFDMDEQICIDVVETHLQSDIPIGPQLVENETIDMVRGDLDGAIV
                     DDDTLVAATDKNQIDHDQGRICECSTYVLEQGS"
     misc_feature    <1..435
                     /gene="LOC139840699"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    805..1146
                     /gene="LOC139840699"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    1336..1542
                     /gene="LOC139840699"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgaaaaaac cttttttatt cctaagttta cttatacccg gtccatctgc tccagataat
       61 aacatagatg tctatatgca acctctagtt gatgagttga aagagttgtg ggatattgga
      121 gttaatactt atgacgcatc aactaagagt tacttcacac tgcgtgcttc tttgttatgg
      181 acggtaagtg actttcctgc gtatgcgaat ttattgggtg ggagcactaa aggtaaatta
      241 gcttgtcctt caagccataa ggaaaccaga tcaacacggt tatcaaactc ccacaaagaa
      301 atcttcatgg cacatcatca ctggttggaa ttgttgcacc ctttctgtat ggataaatat
      361 tcttttgatg gcacagaaga acatgaaggg ccaccgcgta gcttaacagg ggaacaagtg
      421 cttgcggagc tgaaaggttt taaaataaaa tttggaaaac ttgtgaagga taacccatcc
      481 ttaccatata attggaagaa gagaaatgga aagaccaagg atcatttaaa aggacgtcgt
      541 gatttggaag aaatgggtat tagacacgaa cttcatccag aacctttatc aaatggcaaa
      601 gtgtatttgc ctcctgcatg tttcgaaatg gataaaaaag aaaaagacaa attttgtaat
      661 gtgctaaaag aggtgaaagt gccagatggt tatgctgcta atatttctag atgcattcag
      721 cagttgcttc ccgtggcaat aagaaatatt ttaccgaagc atgtgcgttc tgttatcatg
      781 aagttatgtc ggtactacag acagttatgc tcaaaagttc ttaatcctaa tgatttattt
      841 aagatggaaa aagttattgg aaaaatactt tgtgatttag aaaagatttt tccaccatca
      901 ttttttgatg tcatgattca tctatcggtt catctagctt cagaggccag attaggggga
      961 cctgtattta gagagcatct gaatattctt agtcatcaaa atccgaaaaa acgtaagcgt
     1021 gacaatcaac atttacatag tcaggagttt gaggagtggc tgtctgatta cgttgatgag
     1081 gacatgacta gttgtcggga taacagaatc acaagtgata tagagacatt ggcaaacggt
     1141 ccaagtgagg ttgtaaagaa atataaggga tatatcataa atggtttccg atttcacatt
     1201 aaagatgtag agaagaatag gacaacacaa aatagcagag tcatagttca ggctctaaca
     1261 agtagcttct cgagtgctag agataacgat cctattgtgg gagatgtcac ttactacggt
     1321 gttttaaatg atataatcga gttgcagtat ggtgatgaga agaaagttgt tttgttccat
     1381 tgtgattgga tatcaagtgg ttccaggata aaagtttatg agaacgggtt tacgacactc
     1441 aattttcgag gtctgaagca aactaaagag ccttatatcc tagcttcgca agcacaagta
     1501 ttctatgttg cagatcctgt ttgtaaagat tggaaagttg tgatcaagac aacacctaga
     1561 gataattttg acatggatga acaaatttgt atcgatgttg tagaaacaca tttacagagt
     1621 gacataccga taggccctca acttgtagaa aatgagacta ttgatatggt tagaggcgat
     1681 ttggatgggg ccattgttga cgatgatact ttagttgctg ctacagataa aaatcaaatt
     1741 gatcatgatc aggggcggat ttgtgagtgt tcaacatatg tgctagaaca aggctcataa
//
LOCUS       XM_071830949            1071 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840700), mRNA.
ACCESSION   XM_071830949
VERSION     XM_071830949.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1071
                     /gene="LOC139840700"
                     /note="uncharacterized LOC139840700; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840700"
     CDS             1..1071
                     /gene="LOC139840700"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687050.1"
                     /db_xref="GeneID:139840700"
                     /translation="MDSTWMSLCRSSPAYEKGLDKFIERIFSKKGKDSHIYCPCKYCG
                     NHKWVDRVQAKTYLLCDGFFEGYKISNVYFEPDDTPTFEDADEDDMKALAQCVFHVFE
                     DEDDIQQTENQTVPNLNVEKFNKVLKDAKKELYPGCKFSIFSFIVRLFHSKCAGKCNE
                     KGFSMILDTMRETFPHAAILKSLYELRKIIRDLGLGYDKIDACPNDCMLYWKENKDKI
                     KCDVCQTSRYKQINNDSENESTTEADNDGDYKPKKVGAKVLHYFPLIPRLQRLFMSPK
                     TVGSMRWHEEGHTKDGRLRHPVDSPAWKTFDYQNSEFAKEPRNVRLGLASDGFNPFGN
                     MSVSHSTWPVVLMPYNHLHGCA"
     misc_feature    10..204
                     /gene="LOC139840700"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    871..>1050
                     /gene="LOC139840700"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atggactcga cttggatgtc cttgtgtaga tcttcccctg catacgaaaa aggacttgac
       61 aaatttatag aacgtatttt ctctaaaaag ggaaaagata gtcatattta ttgtccgtgc
      121 aaatattgcg gtaatcacaa atgggttgat cgggtccagg ctaaaacata tttgctatgt
      181 gatgggtttt tcgaaggtta taaaatttca aatgtgtatt ttgaaccgga tgatacacca
      241 acgtttgaag atgctgatga agatgatatg aaagcattgg cccaatgtgt cttccatgtg
      301 tttgaagatg aagatgatat ccaacaaact gaaaatcaga ctgtaccaaa cttaaatgtt
      361 gaaaagttta ataaagtatt gaaagatgca aagaaagaat tatatcccgg ctgtaagttc
      421 tctatttttt cgttcattgt tagactcttc cattcaaaat gtgctggaaa atgtaatgaa
      481 aaaggattca gcatgattct tgacacaatg agggaaacct tccctcatgc tgccatactg
      541 aagtcattgt atgaattaag gaagataata agagatttgg gtctaggtta tgataaaatt
      601 gatgcttgtc caaatgattg tatgttgtac tggaaagaaa acaaggacaa aattaagtgt
      661 gatgtatgtc agacctcaag atataaacaa attaataatg attctgaaaa tgagtcaacc
      721 acagaagctg ataatgatgg tgattataaa cctaagaagg ttggagcaaa agtgttgcat
      781 tattttccac tcataccacg cttgcaaaga ttgtttatgt cacctaaaac ggtcgggtcg
      841 atgagatggc atgaagaggg tcatacgaaa gatggtagat taagacatcc tgtagattca
      901 ccagcctgga aaacattcga ttatcagaat agtgaatttg ctaaagaacc tcgtaatgtg
      961 aggcttggtt tggcgagtga tgggtttaac ccttttggaa acatgagtgt ttcacatagt
     1021 acatggcctg ttgttttgat gccatataat cacctccatg gttgtgcatg a
//
LOCUS       XM_071830950            1470 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840701), mRNA.
ACCESSION   XM_071830950
VERSION     XM_071830950.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1470
                     /gene="LOC139840701"
                     /note="uncharacterized LOC139840701; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840701"
     CDS             1..1470
                     /gene="LOC139840701"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687051.1"
                     /db_xref="GeneID:139840701"
                     /translation="MVSALGRVRVMVQCQGSCIWYNVQVDQGLVIYGYMGSGYRLWFG
                     DRANTDPVWLKVGRWCTNHHPYGLGQHMIMAIEGIKKSSLRSSQQVEANTMRKCQFIA
                     PNNMRKRVSVSHVSKESSSKSKSQKGHPIGTNSCQFTHFLGHLSGSYQYCPIYRPWNK
                     VKPEKKDKLLKFLRTKFDIPLTANSWILQSYGRKTKNWRARVKECFFDPSKPMEELLK
                     SPPLQLTKRHWRRLLEYWTRDNVMEMIEKNKANRTKKKFSQMTGKKSFVRIHEELKCR
                     CSWEESQLGLICLRNVTKAVKEQMKDLTEKLGDGATDAPGPDDVFATVMGKAKNGTAE
                     MYGLGVRANHLWCAGPSRLSVSKANAQLMSRNAKLEEENARLKAEKNNGPGALNDGSR
                     VHANGSGDHHLWVDKEVYVKNLTNFENVAIGRLRIIDPNTVLNGTELRHGWCEVHVQA
                     AIKKDEALFRPYDYLKCIHDVTGTSIAWPVKLIELVRED"
     misc_feature    682..1017
                     /gene="LOC139840701"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
     misc_feature    <1258..1410
                     /gene="LOC139840701"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
ORIGIN      
        1 atggtttcgg ctttaggccg ggttagggtt atggttcaat gtcagggttc atgcatatgg
       61 tataatgttc aggtcgacca gggtttggtc atttatgggt atatgggttc tgggtatagg
      121 ttatggtttg gggatcgagc taatactgat cctgtgtggc taaaagttgg ccggtggtgt
      181 acgaatcatc acccttatgg tttaggccag catatgatta tggcaattga aggaatcaaa
      241 aagtcttcac ttagatcctc tcaacaggtt gaggctaata ccatgagaaa atgccagttc
      301 attgcaccta ataacatgag aaaacgagtt agtgtttctc atgtctccaa agaatcatcc
      361 tcaaaatcta agtctcaaaa gggccatcca attggtacaa acagttgtca atttacccat
      421 tttcttggtc acttatcggg gagttaccag tattgtccaa tttatagacc atggaacaaa
      481 gttaaacccg aaaagaagga taagttgctg aagttcttaa ggacaaagtt tgatattcca
      541 ctaactgcta attcgtggat actccaatca tatgggcgca agacaaaaaa ttggagggcg
      601 agagttaagg aatgtttctt tgacccgtct aaaccaatgg aggagctatt aaagtcacca
      661 cctctacaac taaccaaaag acactggaga agacttcttg aatattggac cagagataat
      721 gtgatggaga tgatcgaaaa aaacaaagcc aataggacta aaaagaagtt ttcacaaatg
      781 acggggaaaa aaagttttgt aagaattcat gaagaactaa agtgtaggtg tagttgggaa
      841 gagagccaac tagggttgat atgtttaagg aatgttacaa aagcggtgaa ggaacaaatg
      901 aaagacctaa ccgagaaact cggtgatggt gcaactgatg cacctggacc agatgatgtt
      961 tttgccacgg taatgggtaa agctaaaaat ggtactgcag aaatgtacgg tcttggtgtt
     1021 cgcgccaatc atttgtggtg tgcaggacct agtcgattat ctgttagtaa agcaaatgct
     1081 cagctgatgt ctagaaatgc aaaacttgaa gaagaaaatg caaggttaaa agccgagaag
     1141 aacaatggtc cgggtgctct gaatgatggt tcgcgtgttc atgctaatgg ttcgggggat
     1201 caccatttat gggtcgataa ggaagtttat gtaaaaaacc ttacaaactt cgagaacgta
     1261 gcaataggaa ggttgaggat cattgatcca aatacggttc ttaatggaac agaacttaga
     1321 catggttggt gtgaggtcca tgttcaggcg gccattaaaa aagatgaagc tttgtttagg
     1381 ccatatgatt atttgaaatg cattcatgac gtcactggta cgtctattgc ttggcctgtt
     1441 aagttaatcg agttggtacg tgaggattga
//
LOCUS       XM_071830951            1406 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable trehalose-phosphate
            phosphatase C (LOC139840702), mRNA.
ACCESSION   XM_071830951
VERSION     XM_071830951.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1406
                     /gene="LOC139840702"
                     /note="probable trehalose-phosphate phosphatase C; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139840702"
     CDS             11..1081
                     /gene="LOC139840702"
                     /codon_start=1
                     /product="probable trehalose-phosphate phosphatase C"
                     /protein_id="XP_071687052.1"
                     /db_xref="GeneID:139840702"
                     /translation="MAKSLLMMMLRTTAKLYEAIMGLQRWLATRSQSESMSKSKHDYV
                     YGCYSTKAGDQITIDRNYISWLRQHPSALTAFNQMINVAKGKQIVVFLDYDGTLSPIV
                     SDPECAFMSDQMREAVRNVSNCFPTAIISGRSREKVYDFVKLDTLYYSGSHGMDTIAP
                     AQKNNSYDINYQQRRFDNQGNEFIVYQPAQDFLPAVKRILNEVTEKTQNIKGVVIEDN
                     RFCLSVHYRHVNNEDYGRLEEEVLLILAKNRGFHMTRGKKVLEIRPSIKWNKGDAVKY
                     LLETLGLNKSSDVFPIYIGDDRTDEDAFKVLRERGGYPIIVSSTPRDTKALHSLRNTS
                     EVQTFLDRLSRWGSNNVTKDHE"
     misc_feature    <185..1051
                     /gene="LOC139840702"
                     /note="trehalose-phosphatase; Region: PLN02580"
                     /db_xref="CDD:215317"
ORIGIN      
        1 agtgacaatt atggctaaat ccttgctcat gatgatgtta cgcacaacag caaagcttta
       61 tgaggcaata atgggattac aaagatggtt agccacaaga tcccaatctg aatccatgtc
      121 taaatccaaa catgattatg tgtatggctg ctatagtaca aaagctggtg accaaattac
      181 aatcgatcga aattatatct cttggttgag acagcaccct tctgctctta cggcgtttaa
      241 ccaaatgatc aatgtggcaa aagggaagca aatagttgtc ttcttagatt acgatggaac
      301 attatcacca atcgtgagtg atcccgagtg tgctttcatg tctgatcaga tgcgtgaagc
      361 agtacgtaac gtctctaatt gctttccaac agcaattata agcggcagaa gtcgtgaaaa
      421 ggtttatgat tttgtcaagt tagatacatt atactattca gggagtcatg gtatggatac
      481 tattgcacca gctcaaaaga ataactcata tgacataaat tatcaacaaa gacgctttga
      541 taatcagggt aatgaattta ttgtctacca accagctcaa gattttctgc ctgctgttaa
      601 gaggatatta aatgaagtta cagagaaaac acaaaacatc aaaggggtgg tcattgaaga
      661 taatagattt tgcctttctg ttcattatcg ccatgttaac aatgaggatt atggaaggct
      721 ggaagaggaa gtcttgttga tcctagcgaa aaatcgaggt tttcacatga ctagaggcaa
      781 aaaagtgttg gaaattcgac cgtctataaa atggaacaaa ggtgatgctg ttaagtattt
      841 attggaaacg ttagggctta acaagtctag tgatgtcttc cctatataca ttggagatga
      901 tcgaaccgat gaggatgctt tcaaggtttt acgtgaaaga ggaggatatc caattatagt
      961 gtcatcaaca ccaagagaca caaaagcttt gcattcactt cgcaatacat cagaggtaca
     1021 aacgtttttg gatcgtctaa gtagatgggg ttctaataac gtcaccaagg atcatgaata
     1081 aaaagcagcc gtgttgactt cttgtacata tacatatatg atggagtata tatatatatg
     1141 ttatgtcaac aaccgttcgc tactgaagag aatggaagtg gaagtaggat ctcaagttaa
     1201 agttagttat tttagaatga aagaagagaa gcctaatatt atggcaccag gaggacctgt
     1261 tttttgtggt cttcacttgt gtgctgcttc tccattagtc aagtttaaag ctttaattct
     1321 taagaccata ttattttcga aacatatgcc cattaccttt gttatggctt tgatttggtt
     1381 gcctgaacag ggacaaactt atccgt
//
LOCUS       XM_071830952            2782 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR-RED IMPAIRED
            RESPONSE 1-like (LOC139840704), mRNA.
ACCESSION   XM_071830952
VERSION     XM_071830952.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 57% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2782
                     /gene="LOC139840704"
                     /note="protein FAR-RED IMPAIRED RESPONSE 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840704"
     CDS             1..2241
                     /gene="LOC139840704"
                     /codon_start=1
                     /product="protein FAR-RED IMPAIRED RESPONSE 1-like"
                     /protein_id="XP_071687053.1"
                     /db_xref="GeneID:139840704"
                     /translation="MDQYSSSFTSSPHELDESSSFTSPLDDDDSESHNMEFEETQNME
                     YGKSQNIKIGEGMNEKCHIDLEKETDYNVNDDDEEEVSKDGGGQENNNVGVRHDERVE
                     EPKIGMTFDTIEDVANFYANYGKKMGFGVFKRSSEKDAIDDITKYATFACSRAQKSVS
                     KSRNSLNPRPTTKTNCGAKVRVVLGADKKYRLSKVYLEHNHPFSPSKGRFYRCHRVIN
                     RHVKRQLEIHQRAGVRMNKSFNTLVVENGGYENLTFTEKDCRNYINKVKRLKFGEGDA
                     EAVQGYFLKVRSVDREFFYAWELDEENRLKSLFWADSRYRAAYEEFGDVVTFDTTYLT
                     NEYDMPMAPFVGVNHHGQSILCGCGLISNEDVRTFTWLFRTFLSCMSGRAPNAIITDQ
                     DQAMKNAIEIVFPQAYHRWCLWHIMKKIPDKFRKHKKYKSIKYHLKKAVYDSLTTGEF
                     EVAWKTMIGRYKLEKNRWLNPLYEERRRWVPCFVKDIFWAGMSTTQRSESINSFFDKY
                     VNKKTTLKQFVEQYENALRDRAEKENIEDFNSYNSLYPPITRYAMEKQMKDVLTNGKF
                     KEFRVELTGKMYCGIGFIKSHDGYLEYEVIEDVMDNERLLKKHFLVWFKRSDSIEECD
                     IKCICRLFEFRGMLCRHVLTVLTNENIYLVPKKYILQRWRKDVKRRHTKVKVNYSDWV
                     VSDVGRRYDKMCYAFSKVADLASDLDEKCNIVLNRVKELKSEILGEKASNATSTMHTP
                     HITDSN"
     misc_feature    214..2214
                     /gene="LOC139840704"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggatcaat actcatcttc ttttacttct tcaccacatg aattagatga atcatcttct
       61 tttacttctc cattagatga tgatgattcg gaatctcaca atatggaatt tgaagaaact
      121 caaaatatgg aatatggaaa atcacagaat ataaaaattg gtgaaggaat gaatgagaaa
      181 tgtcacattg atttggaaaa agaaaccgat tacaatgtaa acgatgacga tgaggaagaa
      241 gttagtaaag atggaggtgg tcaagaaaac aataatgttg gtgttcgaca tgatgaacga
      301 gttgaagaac caaaaattgg aatgactttt gacacgattg aagacgttgc aaacttttat
      361 gcaaactatg ggaagaaaat gggatttgga gtctttaaaa gatcttcgga aaaggatgct
      421 attgacgaca ttacaaagta tgctactttt gcatgtagtc gggctcagaa gtcagtctcc
      481 aaatcgagaa atagtttgaa ccctcgtccc actacaaaaa caaattgtgg tgctaaagtt
      541 agagtagttc ttggcgctga taaaaaatat cgtttgtcaa aagtttatct cgaacataat
      601 catccgttta gtcccagcaa aggaagattc taccgttgtc atcgggtaat aaatcgacat
      661 gtgaaaagac aacttgaaat tcatcaaaga gctggggtaa gaatgaataa gagtttcaat
      721 actttggtcg tcgagaatgg aggatatgaa aatttaacct ttacagaaaa ggattgtcgt
      781 aactatatta ataaagttaa acgattgaag tttggagaag gtgatgctga agcggtacaa
      841 ggttacttct tgaaggttcg gtcagtagat cgtgagtttt tttacgcatg ggaattggac
      901 gaggaaaata gactaaagag tttattttgg gcagattcaa ggtatagggc agcttacgag
      961 gaatttggag atgttgtcac tttcgataca acatatttga cgaatgagta tgatatgcca
     1021 atggctcctt ttgtaggggt aaatcatcat gggcaatcaa tattgtgtgg ttgtggacta
     1081 atttcaaatg aagatgtcag aacatttaca tggctttttc gaacttttct ttcgtgtatg
     1141 tcagggcgtg ctcctaatgc aattatcacg gaccaagacc aagctatgaa aaatgcaatt
     1201 gagattgttt ttccacaagc atatcacagg tggtgcttat ggcatatcat gaaaaaaata
     1261 cctgacaagt ttcgtaaaca caaaaaatac aaatcaatta agtaccatct taaaaaggca
     1321 gtttatgatt ctttgactac aggtgaattt gaagtagcat ggaaaacaat gataggtaga
     1381 tataagcttg aaaagaatag gtggcttaat cctttgtatg aggaaaggcg acgatgggtc
     1441 ccttgctttg tgaaagatat cttttgggca ggcatgtcta ctacacaacg tagtgaaagc
     1501 attaactcgt tctttgataa atatgtaaac aagaaaacta ctctaaaaca atttgtggaa
     1561 caatatgaaa atgcattgag ggatagggct gagaaggaga acattgaaga ttttaattcc
     1621 tataactcat tgtacccgcc aattactcgt tatgccatgg agaaacaaat gaaggatgtt
     1681 ttaaccaatg gtaagttcaa agagttcagg gtagagttga cgggaaaaat gtattgtggg
     1741 attggcttta taaaatcaca cgatgggtac ttagaatatg aagtcattga agatgtaatg
     1801 gataatgaaa ggcttttgaa gaaacatttt ttagtttggt tcaaaaggag tgattcgatt
     1861 gaagaatgtg atatcaagtg tatatgtcgt ttgtttgaat ttaggggaat gttgtgtagg
     1921 catgtactta cggtgctcac taatgaaaat atatatttgg ttcctaaaaa atacatctta
     1981 caaagatgga gaaaagatgt taagagaaga catactaagg tgaaagtaaa ttacagtgat
     2041 tgggttgtct cggatgttgg ccgtcgttat gataaaatgt gttatgcttt ttctaaagtg
     2101 gcagatttgg cttccgatct agacgaaaaa tgtaatattg tacttaatcg ggttaaggag
     2161 ttaaagagtg aaattttagg tgaaaaagct agcaatgcta ctagcaccat gcatacacca
     2221 catatcactg attctaatta agataacgtt aagattcgta atcctccatc ggtgcgtaga
     2281 aaaggtcgtc ctccaagtaa gagactaaag tccacatccg aaaaaatcat aacaagtatc
     2341 cagaaaagga agacgacttt acaagattct ggtcaaagtg atcatggata cggagttgca
     2401 gataacgaaa cagtgaaaga ggaaacttca aatgcatatt atgtttcaag tgatacaaat
     2461 catattgagt atgctaatat tccgcttcag tacggtggat tcattccaag ttatgctatg
     2521 ccagagtcac tatatccagc acaaaattat catgtgttta atcaagcatc tccacaactg
     2581 cagctaaatg ttgtccaaat gcagcaacaa tcacatatca actctttgaa cgcaccaatt
     2641 aatatgccat ttggtcctcc aaataacgca ccatatcgtc catagaagat ttagcggttt
     2701 agtatctccg attttcattt tattatatga tcatggttga atgtttagtt accttctgaa
     2761 ttgaaatgtt gggacacttt tt
//
LOCUS       XM_071830953             453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840705), mRNA.
ACCESSION   XM_071830953
VERSION     XM_071830953.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..453
                     /gene="LOC139840705"
                     /note="uncharacterized LOC139840705; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840705"
     CDS             1..453
                     /gene="LOC139840705"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687054.1"
                     /db_xref="GeneID:139840705"
                     /translation="MLNEEIPDVPYHVNGVEYERGYYLADGIYPTWASFVKGFSCAVD
                     KKRSYFTRKQAGARKDIERTFGILQGRWHILQQPARGYEVNQMRRLMYTCIIIHNIII
                     EDIGYNLAENDWVVEPVVRMQRTWIDRCDTRKRRTKELRDSEVHEGLR"
     misc_feature    <19..282
                     /gene="LOC139840705"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcttaatg aggaaattcc agacgtacct tatcatgtaa acggtgttga gtacgaaaga
       61 ggatactatt tagctgacgg tatttatcca acatgggcgt catttgtgaa aggattttca
      121 tgtgcagttg acaaaaaacg ttcttacttt acaaggaaac aagcgggagc tcgcaaagat
      181 attgaaagaa cttttgggat tctacaaggt cgttggcata ttcttcaaca acccgcacga
      241 ggttacgaag tgaatcaaat gagacgactt atgtatacgt gcatcataat acataacatc
      301 attattgaag acattgggta caaccttgct gagaatgatt gggtagttga gccggttgta
      361 cgtatgcaac gtacttggat cgacagatgc gacactcgta aaagaagaac aaaggagtta
      421 cgtgatagtg aagttcacga aggcttacga tag
//
LOCUS       XM_071830955            2469 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR-RED IMPAIRED
            RESPONSE 1-like (LOC139840706), mRNA.
ACCESSION   XM_071830955
VERSION     XM_071830955.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2469
                     /gene="LOC139840706"
                     /note="protein FAR-RED IMPAIRED RESPONSE 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840706"
     CDS             1..2469
                     /gene="LOC139840706"
                     /codon_start=1
                     /product="protein FAR-RED IMPAIRED RESPONSE 1-like"
                     /protein_id="XP_071687056.1"
                     /db_xref="GeneID:139840706"
                     /translation="MDQYSSSFTSSPHELDESSSFTSPLDDDDSESHNMEFEETQNME
                     YGKSQNIKIGEGMNEKCHIDLEKETDYNVNDDDEEEVSKDGGGQENNNVGVRHDERVE
                     EPKIGMTFDTIEDVANFYANYGKKMGFGVFKRSSEKDAIDDITKYATFACSRAQKSVS
                     KSRNSLNPRPTTKTNCGAKVRVVLGADKKYRLSKVYLEHNHPFSPSKGRFYRCHRVIN
                     RHVKRQLEIHQRAGVRMNKSFNTLVVENGGYENLTFTEKDCRNYINKVKRLKFGEGDA
                     EAVQGYFLKVRSVDREFFYAWELDEENRLKSLFWADSRYRAAYEEFGDVVTFDTTYLT
                     NEYDMPMAPFVGVNHHGQSILCGCGLISNEDVRTFTWLFRTFLSCMSGRAPNAIITDQ
                     DQAMKNAIEIVFPQAYHRWCLWHIMKKIPDKFRKHKKYKSIKYHLKKAVYDSLTTGEF
                     EVAWKTMIGRYKLEKNRWLNPLYEERRRWVPCFVKDIFWAGMSTTQRSESINSFFDKY
                     VNKKTTLKQFVEQYENALRDRAEKENIEDFNSYNSLYPPITRYAMEKQMKDVLTNGKF
                     KEFRVELTGKMYCGIGFIKSHDGYLEYEVIEDVMDNERLLKKHFLVWFKRSDSIEECD
                     IKCICRLFEFRGMLCRHVLTVLTNENIYLVPKKYILQRWRKDVKRRHTKVKVNYSDWV
                     VSDVGRRYDKMCYAFSKVADLASDLDEKCNITLQDSGQSDHGYGVADNETVKEETSNA
                     YYVSSDTNHIEYANIPLQYGGFIPSYAMPESLYPAQNYHVFNQASPQLQLNVVQMQQQ
                     SHINSLNAPINMPFGPPNNAPYRP"
     misc_feature    214..>2139
                     /gene="LOC139840706"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggatcaat actcatcttc ttttacttct tcaccacatg aattagatga atcatcttct
       61 tttacttctc cattagatga tgatgattcg gaatctcaca atatggaatt tgaagaaact
      121 caaaatatgg aatatggaaa atcacagaat ataaaaattg gtgaaggaat gaatgagaaa
      181 tgtcacattg atttggaaaa agaaaccgat tacaatgtaa acgatgacga tgaggaagaa
      241 gttagtaaag atggaggtgg tcaagaaaac aataatgttg gtgttcgaca tgatgaacga
      301 gttgaagaac caaaaattgg aatgactttt gacacgattg aagacgttgc aaacttttat
      361 gcaaactatg ggaagaaaat gggatttgga gtctttaaaa gatcttcgga aaaggatgct
      421 attgacgaca ttacaaagta tgctactttt gcatgtagtc gggctcagaa gtcagtctcc
      481 aaatcgagaa atagtttgaa ccctcgtccc actacaaaaa caaattgtgg tgctaaagtt
      541 agagtagttc ttggcgctga taaaaaatat cgtttgtcaa aagtttatct cgaacataat
      601 catccgttta gtcccagcaa aggaagattc taccgttgtc atcgggtaat aaatcgacat
      661 gtgaaaagac aacttgaaat tcatcaaaga gctggggtaa gaatgaataa gagtttcaat
      721 actttggtcg tcgagaatgg aggatatgaa aatttaacct ttacagaaaa ggattgtcgt
      781 aactatatta ataaagttaa acgattgaag tttggagaag gtgatgctga agcggtacaa
      841 ggttacttct tgaaggttcg gtcagtagat cgtgagtttt tttacgcatg ggaattggac
      901 gaggaaaata gactaaagag tttattttgg gcagattcaa ggtatagggc agcttacgag
      961 gaatttggag atgttgtcac tttcgataca acatatttga cgaatgagta tgatatgcca
     1021 atggctcctt ttgtaggggt aaatcatcat gggcaatcaa tattgtgtgg ttgtggacta
     1081 atttcaaatg aagatgtcag aacatttaca tggctttttc gaacttttct ttcgtgtatg
     1141 tcagggcgtg ctcctaatgc aattatcacg gaccaagacc aagctatgaa aaatgcaatt
     1201 gagattgttt ttccacaagc atatcacagg tggtgcttat ggcatatcat gaaaaaaata
     1261 cctgacaagt ttcgtaaaca caaaaaatac aaatcaatta agtaccatct taaaaaggca
     1321 gtttatgatt ctttgactac cggtgaattt gaagtagcat ggaaaacaat gataggtaga
     1381 tataagcttg aaaagaatag gtggcttaat cctttgtatg aggaaaggcg acgatgggtc
     1441 ccttgctttg tgaaagatat cttttgggca ggcatgtcta ctacacaacg tagtgaaagc
     1501 attaactcgt tctttgataa atatgtaaac aagaaaacta ctctaaaaca atttgtggaa
     1561 caatatgaaa atgcattgag ggatagggct gagaaggaga acattgaaga ttttaattcc
     1621 tataactcat tgtacccgcc aattactcgt tatgccatgg agaaacaaat gaaggatgtt
     1681 ttaaccaatg gtaagttcaa agagttcagg gtagagttga cgggaaaaat gtattgtggg
     1741 attggcttta taaaatcaca cgatgggtac ttagaatatg aagtcattga agatgtaatg
     1801 gataatgaaa ggcttttgaa gaaacatttt ttagtttggt tcaaaaggag tgattcgatt
     1861 gaagaatgtg atatcaagtg tatatgtcgt ttgtttgaat ttaggggaat gttgtgtagg
     1921 catgtactta cggtgctcac taatgaaaat atatatttgg ttcctaaaaa atacatctta
     1981 caaagatgga gaaaagatgt taagagaaga catactaagg tgaaagtaaa ttacagtgat
     2041 tgggttgtct cggatgttgg ccgtcgttat gataaaatgt gttatgcttt ttctaaagtg
     2101 gcagatttgg cttccgatct agacgaaaaa tgtaatatta ctttacaaga ttctggtcaa
     2161 agtgatcatg gatacggagt tgcagataac gaaacagtga aagaggaaac ttcaaatgca
     2221 tattatgttt caagtgatac aaatcatatt gagtatgcta atattccgct tcagtacggt
     2281 ggattcattc caagttatgc tatgccagag tcactatatc cagcacaaaa ttatcatgtg
     2341 tttaatcaag catctccaca actgcagcta aatgttgtcc aaatgcagca acaatcacat
     2401 atcaactctt tgaacgcacc aattaatatg ccatttggtc ctccaaataa cgcaccatat
     2461 cgtccatag
//
LOCUS       XM_071830956             453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840707), mRNA.
ACCESSION   XM_071830956
VERSION     XM_071830956.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..453
                     /gene="LOC139840707"
                     /note="uncharacterized LOC139840707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840707"
     CDS             1..453
                     /gene="LOC139840707"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687057.1"
                     /db_xref="GeneID:139840707"
                     /translation="MLNEEIPDVPYHVNGVEYERGYYLADGIYPTWASFVKGFSCAVD
                     KKRSYFTRKQAGARKDIERTFGILQGRWHILQQPARGYEVNQMRRLMYTCIIIHNIII
                     EDIGYNLAENDWVVEPVVRMQRTWIDRCDTRKRRTKELRDSEVHEGLR"
     misc_feature    <19..282
                     /gene="LOC139840707"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcttaatg aggaaattcc agacgtacct tatcatgtaa acggtgttga gtacgaaaga
       61 ggatactatt tagctgacgg tatttatcca acatgggcgt catttgtgaa aggattttca
      121 tgtgcagttg acaaaaaacg ttcttacttt acaaggaaac aagcgggagc tcgcaaagat
      181 attgaaagaa cttttgggat tctacaaggt cgttggcata ttcttcaaca acccgcacga
      241 ggttacgaag tgaatcaaat gagacgactt atgtatacgt gcatcataat acataacatc
      301 attattgaag acattgggta caaccttgct gagaatgatt gggtagttga gccggttgta
      361 cgtatgcaac gtacttggat cgacagatgc gacactcgta aaagaagaac aaaggagtta
      421 cgtgatagtg aagttcacga aggcttacga tag
//
LOCUS       XM_071830957             672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840708), mRNA.
ACCESSION   XM_071830957
VERSION     XM_071830957.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..672
                     /gene="LOC139840708"
                     /note="uncharacterized LOC139840708; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840708"
     CDS             1..672
                     /gene="LOC139840708"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687058.1"
                     /db_xref="GeneID:139840708"
                     /translation="MVHQEGFDLSFSVKDLIHHNGMVWPTNWLNQFSQLTNIVTPILS
                     NEQDVIKWRDSNGNLKDFSNTPKHAFIMWLLMGENLKTQDKPKHWEVAANCVLVCSSC
                     DQVPDSHDHLFFTCSFSRHVWHQVNKHMEFPIFSDSWKDFSLIVSPFAKRNIGRIIVI
                     KLLFVASVYFLWQERNNRIFKKKTRSIDQVYKAIYSKVWLKLMTIKWRLTPKTLRLKA
                     DWKVS"
     misc_feature    <196..366
                     /gene="LOC139840708"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtgcatc aagaaggatt tgatttatct ttttccgtta aagaccttat acatcataat
       61 ggtatggttt ggcctactaa ttggttgaat caattttcac agttaacgaa catagtgact
      121 ccaatccttt cgaatgagca ggatgtaatc aagtggcggg attcgaatgg taatttgaag
      181 gacttttcaa atactcctaa acatgcgttt ataatgtggt tactaatggg tgaaaatttg
      241 aaaacacaag acaaacccaa acattgggaa gtagcggcga attgtgtttt ggtgtgctcg
      301 tcgtgtgacc aagtaccgga ctctcatgat cacttgttct tcacttgctc gttttctcga
      361 catgtatggc accaggttaa taagcatatg gagtttccta tcttcagtga ttcatggaag
      421 gacttttcat tgatagtttc cccatttgct aaaaggaaca taggacgtat tatcgttatt
      481 aagcttttgt ttgtggcttc ggtgtacttt ttgtggcaag aacgtaataa cagaatattt
      541 aagaaaaaga caaggtcgat tgatcaagtg tacaaggcga tttactcaaa agtgtggctc
      601 aagttgatga ctataaagtg gaggttgacg ccaaagacgc ttcgattaaa agcggactgg
      661 aaggtctctt aa
//
LOCUS       XM_071830958            4068 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840709), mRNA.
ACCESSION   XM_071830958
VERSION     XM_071830958.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4068
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4068
                     /gene="LOC139840709"
                     /note="uncharacterized LOC139840709; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840709"
     CDS             1..4068
                     /gene="LOC139840709"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687059.1"
                     /db_xref="GeneID:139840709"
                     /translation="MAPKKKGMSEEEVDNKINQTITNLLPNIIAQAIDAMRNQGGETF
                     KHEDEDEYVEKKAVTGDAIHVWLGRFQKQRPLSFTTASTPVEAENWITHIEKIYRVLG
                     CEERFWVPLAVYKLEGDAQRWWIALRQAKGGIDFEDSLDWVDFKELFFRQYFSEAEKE
                     AVIREYANIKQGNDESINDFTKRFLRLVGLIGAAAGSSEDQARKYKWAVHGRYRSKMI
                     NLKCFDVAEAADYARNLEMERAEYLATKNEDGKNKRGQQSGNQGYRSNNWNNRGNQQR
                     IDNGPNNNNRGQLQVYRPQGQQRGNGSGGVNANAPCGTCGKNHPGRVCYRSAGSCFAC
                     GEVGHLAKDCKNPRPGFVPKVPPPAPGGRVFAMTAAQAADATGTITGHVFVHHHALFV
                     LFDSGSTHSIVSVKSSKYLKVSPTWLSTPFTISTPMGSVETIDRVYQNCRLEFNDCMF
                     PANLFPMTMHDFDIILGMDWLSRHHANIDCYSKRILFGNHSIPDCVFNGDLPVKFIKV
                     ISAFKAQKLISHGCVGYLASIQNLSIESPSLENIDVVREFPDVFPDELQGLPPVREVE
                     FSIDLIPGSQPISKAPYRMAPLELQELKEQLQELIDCGFIRPSVSPWGAPSKEEHENH
                     LRVVLETLRSKKLFAKFSKCEFWLQRVAFLGHVVSAEGIMMDPAKIEAIINWSRPTSV
                     VEVRSFLGLAGYYRRFVEGFSTIALPLTKLLRKGEKFVWTEERQKSFDELKKRLVSAP
                     ILALPSGSGGFQIYSDASKHGLGCVLMQHGKVIAYASRQLKPYEVNYPTHDLELAAVI
                     FALKIWRWLELLKDYDANIQYHPGKANVVADALSRKSFGSISCLVTHIREFERLDMGL
                     SKRGASGMLANLKFESDLITRIKEAQLDDGDLWTAFQNLEEGKVKEFREDDDGVIWCG
                     SRLCVPNDDAIREALLSEAHSSPFSIHPGSTKMYQDLKQHFWWSGMKKDVARYVGKCL
                     TCQQVKIEHQRASGLLQPLDIPVWKWDDISMDFVCGLPKTVKRHDAIWVVIDRLTKSA
                     HFLPIRIDYSVSKLSELFQQEIVRLHGVPSSIVSDRDPRFTSRFWKGLQKAWGTRLKL
                     STAFHPQTDGQSERTIQILEDMLRACALDWKGNWDEYLCLVEFAYNNSWQASIRMAPF
                     EMLYGRKCRAPVCWNETGEKLIEGPELVRVTNEKVAIATNRLKEAQSRQKVYADKHRR
                     SLEFVVGDKVFLKVSPWKGIRRFGLKGKLSPRYIGPFEILDRVGEVSYRLALPPQLSH
                     VHNVFHVSQLRGYNYHPLHVVQYPFSEIRADLSYVEEPEAIIEREERVTRKSSTPFVK
                     VQWKNHSASEATWELEETMRAEHPHLFANWCVSIL"
     misc_feature    331..615
                     /gene="LOC139840709"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
     misc_feature    <736..>921
                     /gene="LOC139840709"
                     /note="transcription termination factor Rho; Provisional;
                     Region: PRK12678"
                     /db_xref="CDD:237171"
     misc_feature    928..>1062
                     /gene="LOC139840709"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    1084..1467
                     /gene="LOC139840709"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1183..1185,1189..1191,1195..1197,1270..1278,
                     1393..1395)
                     /gene="LOC139840709"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1183..1191
                     /gene="LOC139840709"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1183..1185
                     /gene="LOC139840709"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1270..1281,1291..1302)
                     /gene="LOC139840709"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    <1846..1974
                     /gene="LOC139840709"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    2161..2424
                     /gene="LOC139840709"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    2761..2934
                     /gene="LOC139840709"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    2980..3282
                     /gene="LOC139840709"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
     misc_feature    3895..>4020
                     /gene="LOC139840709"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; Region: CD_CSD; cd00024"
                     /db_xref="CDD:349274"
     misc_feature    order(3895..3906,3961..3963,3967..3978,3988..3990,
                     3994..4005,4009..4014)
                     /gene="LOC139840709"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:349274"
ORIGIN      
        1 atggcaccga aaaaaaaggg aatgtccgag gaggaggtag ataacaagat taaccaaact
       61 atcacgaatt tgttacccaa cattatagct caagctattg atgctatgcg taatcaaggt
      121 ggcgagactt ttaagcatga agacgaggat gagtatgtgg agaagaaagc tgtaacgggg
      181 gatgctattc atgtttggtt aggacggttt caaaaacaac gtcctttgtc attcaccact
      241 gctagtaccc ccgtggaagc tgagaattgg atcactcaca ttgagaagat ataccgagtg
      301 cttggttgtg aagagaggtt ttgggtgcca ttagctgttt ataaactaga gggggatgct
      361 cagcgctggt ggatcgcttt gagacaagcg aaagggggta tcgattttga ggattcatta
      421 gattgggttg atttcaaaga gttgtttttc cgtcagtact tttctgaggc ggagaaagaa
      481 gctgtgattc gggagtatgc gaatattaag caagggaatg atgagtctat taatgatttc
      541 actaagaggt ttttgaggct tgtgggtttg attggtgctg ctgctgggtc ttctgaggac
      601 caagcccgta agtacaaatg ggctgttcat gggcgttacc gctctaaaat gattaatctg
      661 aaatgttttg atgtcgctga ggcagccgat tatgctcgca atttggagat ggagcgagct
      721 gagtatttgg ctactaaaaa tgaggatggt aaaaacaaga ggggtcaaca atctgggaac
      781 caagggtatc gtagtaataa ttggaataat agaggaaatc agcaaaggat tgacaacggg
      841 ccaaataata ataaccgtgg tcaattacaa gtgtaccgtc cccaagggca gcaaaggggt
      901 aatggaagtg gtggtgttaa tgccaacgca ccatgtggga cttgtggaaa gaatcatccg
      961 ggaagagttt gttatcgtag tgcgggttca tgttttgctt gtggagaggt tggtcactta
     1021 gctaaggatt gcaagaatcc tagacctggg tttgttccga aggttcctcc gccagctcct
     1081 ggtggacgcg tctttgccat gactgctgct caggctgctg acgctacagg tactattact
     1141 ggtcatgtat ttgtacacca tcacgccctc ttcgttctgt ttgattctgg ctctacgcac
     1201 tcgattgtgt ctgttaagag ctcgaaatat ttgaaagtgt ctccaacttg gttgtctact
     1261 ccatttacga tctctacccc aatgggtagt gttgaaacta tagatcgcgt gtatcaaaac
     1321 tgccgtttgg aattcaatga ttgcatgttt cctgcaaatc tctttcctat gaccatgcat
     1381 gactttgaca ttattcttgg catggattgg ttatctcgcc atcatgcgaa tatcgattgt
     1441 tattctaaga ggattttgtt tggaaatcat tctatacccg attgtgtctt taatggcgat
     1501 cttcctgtaa agtttatcaa ggttatctca gcgtttaagg cgcaaaagct catttcacat
     1561 ggttgtgttg gttatttagc ttcgattcag aatttgtcta tcgagagtcc ttcccttgaa
     1621 aatatcgatg ttgttcgaga gtttcccgat gtatttcctg acgaattaca gggtttacct
     1681 ccagttcgtg aagttgaatt ttcgattgat ttgattccgg gttcccaacc gatatcaaaa
     1741 gctccttatc gtatggcacc acttgagttg caagaactca aggagcaatt gcaagagttg
     1801 atagattgtg gttttattcg gccaagtgtg tcaccttggg gtgcgccgag taaagaagag
     1861 catgagaatc atcttcgtgt tgtacttgaa accctacgaa gtaagaaatt gtttgcgaaa
     1921 ttctctaaat gtgaattctg gttgcaaaga gttgcctttc tgggtcatgt tgtatcggct
     1981 gagggtataa tgatggatcc agcgaaaatt gaggctatta taaattggtc aagacctact
     2041 tctgttgttg aggttcgaag ttttcttggt ttagctggtt attatcgacg atttgttgaa
     2101 ggtttttcga cgattgcttt gccgcttacc aagttattga ggaaagggga aaaatttgtg
     2161 tggaccgagg aacgacaaaa gagtttcgat gagttaaaga aaagacttgt atcagctcct
     2221 attcttgcat tgccatcagg gagtgggggt tttcaaatct atagtgatgc ttctaagcat
     2281 ggtttgggtt gcgttttgat gcagcatggt aaggtaattg cttatgcctc gaggcagttg
     2341 aaaccctatg aggttaatta ccctactcat gatttggagt tagctgctgt gatctttgcg
     2401 ttgaaaatat ggaggtggct cgagttattg aaggattatg atgcaaacat tcaataccat
     2461 cctggaaaag cgaatgtggt agccgacgca ttaagtagaa agtcatttgg tagtatctca
     2521 tgtttggtta ctcacattcg agaattcgaa agacttgata tgggattgag taaaagagga
     2581 gcatcgggga tgttggcaaa tctaaaattc gagtctgatt taattactag aataaaagaa
     2641 gctcaattgg atgatgggga tttgtggaca gcgtttcaaa atttggaaga gggtaaagtg
     2701 aaagagttca gagaagatga tgatggggtt atttggtgtg ggagtcgatt gtgtgttcct
     2761 aatgatgatg ctattcgtga ggctctgttg tctgaggctc acagctcacc tttttctata
     2821 catcctggtt cgaccaaaat gtatcaggat ttaaagcagc acttttggtg gagtggcatg
     2881 aagaaagacg ttgctagata tgttgggaag tgccttactt gtcaacaagt aaagatcgag
     2941 caccaacgtg ctagtggttt gttgcagccg ttggacattc ccgtgtggaa gtgggatgat
     3001 atctcaatgg atttcgtatg tggtttaccg aagactgtga aaaggcacga tgctatttgg
     3061 gtggtgattg atagattaac caaatcggca catttcttgc ctattcgtat agattattcg
     3121 gtaagtaagc tatccgagct ttttcagcaa gaaattgtga gattacacgg ggtcccttcg
     3181 tccatcgtat ccgatcgtga ccctcgattt acatctagat tttggaaggg gctacagaaa
     3241 gcttggggta cgcgattgaa acttagtact gcttttcatc cacaaactga tggacagtct
     3301 gagcgtacga tacagatttt ggaagatatg cttcgagcgt gtgccctaga ttggaaggga
     3361 aattgggatg agtacttatg tttggtggag tttgcctata ataatagttg gcaggctagt
     3421 atccgtatgg cgccatttga gatgctttat ggtcgaaagt gtagagcgcc agtttgttgg
     3481 aatgaaacgg gagagaaact gattgaagga cctgagttgg ttagagtgac taatgaaaag
     3541 gtcgctatag ctacgaatcg actgaaggaa gcccaatcga gacagaaagt gtatgccgat
     3601 aaacaccgac gttcgttaga gtttgttgtg ggtgataagg tgtttttaaa ggtgtcacct
     3661 tggaagggta tacgacgttt tggtttgaaa ggaaagctca gtcctcgata tattggccca
     3721 tttgagatat tggatcgagt tggtgaagta tcttatcgtt tagcattacc gccacagtta
     3781 tctcatgttc ataacgtatt tcacgtatct cagttgcggg gttacaacta tcatccattg
     3841 cacgtggtgc aatatccttt ttctgaaatt cgagctgatc tttcttatgt tgaagagccc
     3901 gaggctatta tagaacgtga ggagagagta actcgtaaaa gctccacacc tttcgttaaa
     3961 gttcaatgga agaatcactc tgctagcgag gccacttggg aactcgagga aaccatgcgg
     4021 gccgaacacc ctcatttgtt tgctaattgg tgcgtttcga ttctataa
//
LOCUS       XM_071830959             911 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bax inhibitor 1-like
            (LOC139840710), mRNA.
ACCESSION   XM_071830959
VERSION     XM_071830959.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..911
                     /gene="LOC139840710"
                     /note="bax inhibitor 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840710"
     CDS             84..911
                     /gene="LOC139840710"
                     /codon_start=1
                     /product="bax inhibitor 1-like"
                     /protein_id="XP_071687060.1"
                     /db_xref="GeneID:139840710"
                     /translation="MESFSSFFNSESQSASRNSWTYDSLKNFRQISPVVQTHLKQVYL
                     SLCCALVASAVGAYLHILWNIGGLLTTLATLGCMSWLLATPPNHEQKRVSLLMVSSLL
                     QGASIGPLIELALEFDPSILVSAFMGTAIAFACFSGAAMLAKRREYLYLGGFLSSGVS
                     ILFWLHFASSIFGGSVAMFQFELYFGLLVFVGYMVFDTQQIIEKAHLGDLDYVKHALT
                     LFTDFVAVFVRILIIMVSLSFASSCLYCFLYSTNGMLNVLQLKNSAAREEKKKKRRD"
     misc_feature    165..785
                     /gene="LOC139840710"
                     /note="BAX inhibitor (BI)-1; Region: BI-1; cd10430"
                     /db_xref="CDD:198412"
ORIGIN      
        1 ctcaaagtcg cccaaattca caaacaacca aaaagatacg agtattaatt aatttcatta
       61 ttaatattaa tttcaattac acgatggaat cgttctcttc gttcttcaat tcggaatcac
      121 aatcagcttc tcgtaacagt tggacttacg attctcttaa aaatttccgt cagatctcac
      181 ctgttgttca aactcatctc aaacaggtct atctttcact gtgttgcgcg ctagtagcgt
      241 ctgcagttgg tgcttatctt cacattttat ggaatattgg tggtctcttg actaccttgg
      301 cgactttagg atgtatgtcg tggttacttg ccactcctcc gaatcatgag caaaaaaggg
      361 tttcgttgtt gatggtttcg tcccttctcc aaggagcttc cattggtcct ttgatcgagt
      421 tggcccttga atttgaccca agcatcttgg tgagcgcatt catgggaact gcaatcgcgt
      481 ttgcttgttt ctcaggggca gccatgttgg ctaagcgtag agagtacctt taccttggcg
      541 gctttctttc ttctggtgtt tcaatcctat tctggttgca ttttgcttca tccatatttg
      601 gtggttctgt tgcaatgttc cagtttgagc tgtattttgg gcttttggtg tttgttgggt
      661 acatggtgtt cgatacacaa caaatcattg aaaaagctca ccttggagat ttggattatg
      721 ttaagcacgc actcacacta ttcactgact ttgttgccgt ctttgtccgc atccttatca
      781 tcatggtaag cttaagtttt gcatcctcat gtttgtattg ttttttgtac tctactaatg
      841 gtatgttgaa tgtgttgcag ctgaagaatt cggctgcaag ggaagaaaag aagaagaaga
      901 ggagggatta g
//
LOCUS       XM_071830960            1025 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840711), mRNA.
ACCESSION   XM_071830960
VERSION     XM_071830960.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1025
                     /gene="LOC139840711"
                     /note="uncharacterized LOC139840711; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840711"
     CDS             45..1025
                     /gene="LOC139840711"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687061.1"
                     /db_xref="GeneID:139840711"
                     /translation="MVIGSTVNGNCSLTATSVAHRKWKPRKVSAVRQFPPGCGPIDYS
                     VNTVPELVEASSQKGPEVVESSHKVHEVVEASHKVHEVVEASENGATDAGADNGGGPL
                     NALVQVDNGKLLSDINEVDKGGDDVKKATIKKFPRRKVSAVRHFPPFCGLNAPEPTEE
                     ERVIINGKRKCEKTEDKNGASDVRLIESTVNDSGNESLAKQKVEVEDGKIEKVEQRTK
                     VHNIGQACQALVVYARDNKMKRKCSDDEDSEDDKFRDTMKKDVKNIVDNRVGYEKSII
                     KRKLIGSKGKGSQDLKMTKQRNEEREREEDDDNEFVVDSEERERKNQEKS"
ORIGIN      
        1 ctgaagtact ttggattcgt tattgtaatt taagttgctc aggaatggtg attggttcaa
       61 ctgtgaatgg taattgctcc ttgactgcta cttctgttgc tcatcgtaaa tggaagcccc
      121 gtaaagtttc ggcggttagg caatttccgc caggttgcgg tccgatcgat tattctgtta
      181 atacggttcc tgaattagtt gaagcatcat ctcaaaaggg tcctgaagta gttgaatcat
      241 ctcataaggt tcatgaagta gttgaagcat ctcataaggt tcatgaagta gttgaagcat
      301 ctgaaaatgg agctactgat gctggggcag ataatggtgg tggcccactg aatgcattgg
      361 ttcaagtgga taatggtaag ttgttgtcag acattaatga ggtggataag ggtggtgatg
      421 atgtgaaaaa agctacaata aagaagtttc cgagaagaaa agtgtctgca gttcgacatt
      481 ttcccccctt ttgtggctta aatgcacctg aacctacaga agaagaacgt gtaataatta
      541 atggaaagag aaaatgtgaa aaaacagagg ataagaatgg tgcaagtgat gtgagattga
      601 ttgaatctac tgttaatgat tcaggcaatg agtctttggc aaagcaaaag gttgaggttg
      661 aagatgggaa aattgagaag gttgaacaaa gaacgaaagt gcataatata ggtcaagcgt
      721 gtcaagcact tgtggtctat gcacgtgaca ataaaatgaa aagaaaatgt tcagatgatg
      781 aagattcgga agatgataag tttagagata ctatgaagaa ggatgtcaag aatatcgtcg
      841 ataacagagt ggggtatgag aaaagtatta taaagagaaa acttataggg tccaagggaa
      901 aagggagtca agatttgaag atgacaaaac aaagaaatga agaacgagaa cgagaagaag
      961 atgatgataa tgagtttgtt gtggatagtg aagaacgaga acgaaagaat caagaaaagt
     1021 cttaa
//
LOCUS       XM_071830961             852 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840712), mRNA.
ACCESSION   XM_071830961
VERSION     XM_071830961.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..852
                     /gene="LOC139840712"
                     /note="uncharacterized LOC139840712; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840712"
     CDS             1..852
                     /gene="LOC139840712"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687062.1"
                     /db_xref="GeneID:139840712"
                     /translation="MVNKKSNNELLLEKFARIFRLDINEDALVSDRLVKDSSSWRFNW
                     EWARDSRGRTATELQQLQRLHGTFSFVNGDSDKWEWKLHNKGQFSTNVFTCLLNEKLL
                     RLNAHIVSTARNNFLPQKVNIFIWRKKLKRLPFRDELDKRGVDLDTLLCPICSSAIEC
                     VEHALLTCPFAMDVWSRVRRWWGIHNHFYSGLDDMFVGNRSLASNNAPCKIWQVIEWV
                     CGYILWKNRNAKVFGKNSWTGPMALNKIQIKTFQWISSHPRSSPIEWTNVYRIHLDFS
                     CLFAQEH"
     misc_feature    <340..513
                     /gene="LOC139840712"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtaaata aaaaaagtaa taatgaattg ttgctagaga aatttgcaag aattttcagg
       61 ttggacataa atgaagatgc acttgtttcg gatcgtttgg taaaagatag ctcgtcgtgg
      121 agattcaatt gggaatgggc tcgagattca aggggcagaa ctgctactga attacagcaa
      181 cttcagaggc tgcatggaac gttctccttt gtgaatggtg actctgataa atgggaatgg
      241 aaactgcaca acaaaggtca attttcgact aatgtcttta catgtctcct taatgaaaag
      301 ctgctgcgtt tgaatgctca tattgtctca acagcccgca acaatttcct gccacaaaaa
      361 gtgaacatct ttatttggag aaaaaaatta aaaagactac cgtttcgcga tgagctagac
      421 aagagaggtg ttgatcttga cacactcctt tgccccattt gtagctcggc aattgaatgt
      481 gtcgaacatg ccttgttaac gtgtcctttt gccatggatg tgtggtcacg agttcgtcgt
      541 tggtggggta tccacaatca tttctactcc gggttagatg atatgtttgt aggtaatcga
      601 tccctcgcaa gtaataacgc tccatgtaaa atatggcaag ttattgagtg ggtgtgcggc
      661 tacattttgt ggaagaatcg gaatgctaaa gttttcggta aaaattcatg gaccggacct
      721 atggctctta ataaaattca aatcaagacg tttcaatgga tctcaagtca tccaagaagc
      781 tctcctattg agtggaccaa tgtctatcga atccatctcg actttagttg tttgtttgct
      841 caggagcatt ag
//
LOCUS       XM_071830962             963 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840713), mRNA.
ACCESSION   XM_071830962
VERSION     XM_071830962.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..963
                     /gene="LOC139840713"
                     /note="uncharacterized LOC139840713; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840713"
     CDS             1..963
                     /gene="LOC139840713"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687063.1"
                     /db_xref="GeneID:139840713"
                     /translation="MAHELMDQIEQRGKAPASSETKTFDNKIKWNNNNSGKNYNQQPY
                     KGRYPLCAKCNWHHPGHCNKVCDKCKKNEHIASECKAGTDVCYGCEKTGYFRKYCPTA
                     NKNTEPARGRAFNIDSNEARDDPKLVMGTFLLDNHHSYVLFDSGADRSFVSRDFCHNL
                     KNHNHASVTCGRLILVIQSYEFLVDSRLINWGCWPGQAAESLNGIDVIPIKLGSFDLV
                     VGMYWLAENRADIVCYQKMICIPVTEDEPLMVYGERSNTPLHFINCLKAHKHIRKGCL
                     AMLVHVSKTEPEVKKLEDELTVRDFPDVFSDELPGLPPHRDVDF"
     misc_feature    <151..339
                     /gene="LOC139840713"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    325..714
                     /gene="LOC139840713"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    430..438
                     /gene="LOC139840713"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    430..432
                     /gene="LOC139840713"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atggcacatg agttaatgga tcaaattgaa cagcgaggaa aggctcctgc atcatctgag
       61 acaaaaactt ttgacaacaa gataaagtgg aataacaaca actctggaaa gaactacaac
      121 cagcagccct ataagggaag gtatccgtta tgtgctaaat gcaactggca tcacccggga
      181 cattgcaaca aggtgtgtga taagtgtaag aagaatgaac acatagcctc ggagtgtaaa
      241 gctggtacag atgtttgtta tggatgcgaa aaaactggtt attttagaaa gtactgtccg
      301 actgcgaata agaatactga acctgctagg ggcagagctt tcaacatcga ctccaatgaa
      361 gctcgtgatg atcctaagtt agtcatgggt acatttttac tcgacaatca tcattcttat
      421 gtactttttg attctggtgc tgataggagt tttgtgtcta gagatttttg ccataatctt
      481 aagaatcata atcacgcatc tgtcacgtgt ggaagactta tactagtgat acagagttat
      541 gagtttttgg tagactctag actgatcaac tggggttgtt ggcccggcca ggctgccgag
      601 tctctcaatg gaatagatgt aatcccgatt aagctgggaa gttttgacct tgtggttgga
      661 atgtactggt tagctgagaa tagagccgat attgtttgtt accagaaaat gatttgcatt
      721 cctgttaccg aagatgagcc tttgatggtg tatggagaga gaagtaatac accgttgcat
      781 ttcattaatt gtttgaaggc acataagcac ataagaaagg gttgtcttgc tatgctggtt
      841 cacgtaagca aaactgaacc tgaagtcaag aaactcgaag atgagctgac tgttagggac
      901 tttcccgatg ttttttcgga cgagttaccc ggactgccac cacatagaga tgtagatttt
      961 tag
//
LOCUS       XM_071830963            2352 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840714), mRNA.
ACCESSION   XM_071830963
VERSION     XM_071830963.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2352
                     /gene="LOC139840714"
                     /note="uncharacterized LOC139840714; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840714"
     CDS             1..2352
                     /gene="LOC139840714"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687064.1"
                     /db_xref="GeneID:139840714"
                     /translation="MNLVHWLNVFVFNRGVSGSSPGYDVLLFGMASKKTPPLETNWIQ
                     FYDPNGTIFAGIEAFTRRWEFTAGILFCQPIVPEKCFPADASRRDGYLRSCPSSFAAG
                     RSRGFRRGDRLANRVRIRVGSWNVGSLTSKSRELVDTLIKRKVDILCVQETRWRGEEA
                     VCIDDYKLWFSGFSVARNGVGIIIGRPYRDHVVGVDRFSDRIMSVRLVVQEETFMVIS
                     AYAPHAGLGEDEKRRFWESLDAVVRRCPADHRFLIGGDLNGHIGTDVEGYDGVHGGFG
                     FGVRNEEGRSILEFAVAHDLVVANSFFKKTEAQLATFHSGGNSTQIDYLLLRKGDLRS
                     CGDCRALTTWVCSTQHRLLVMDLVLQRRVFKSARPAQPRILWKNLNEEKAETFKALVL
                     ERVEAGVEMDTHVNADQMWESLASTIREAAKESLGVAVGTSKGHRPSRESWWISDEVQ
                     TKVALKQLRFRELTACREGTTEDRTMAEERYKEAKIEAKKVVARAKDKAYEDLYKKLD
                     SKEGANDIYRIAKAREYRRRDIDNIKGIKLLSHTIKLWERVIETRLRRETTISENQFG
                     FMPGRSSMEAIHIIRSLIEKFREKQKSLEMVFLDLEKAYDCVSRKLIWKTLNVRGIPS
                     RYIRAITDMYEGAKSCVRTPVGNTEYFPIDVGLHQGSALSPFLFALILDELSRGLQES
                     VLWCLIFADDIVLVSESKEDLNRRLEQWRETLEQNGIRISRQKTEYLRCDFAKTEDEQ
                     NVGVHINIGDQILHPQDSFRYLGSVLHKSGRIDEDVTHHIKAG"
     misc_feature    361..1071
                     /gene="LOC139840714"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(373..375,454..456,658..660,766..768,772..774,
                     967..969,1045..1050)
                     /gene="LOC139840714"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(454..456,1045..1047)
                     /gene="LOC139840714"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(658..660,772..774,1048..1050)
                     /gene="LOC139840714"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    1585..2298
                     /gene="LOC139840714"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1798..1815,1975..1980,2065..2067,2071..2076,
                     2284..2289)
                     /gene="LOC139840714"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1798..1815,1975..1977,2071..2073)
                     /gene="LOC139840714"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1978..1980
                     /gene="LOC139840714"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgaatttag tccattggtt gaatgtgttt gtgtttaacc gaggggtctc gggttcgagt
       61 ccgggctatg acgtacttct ttttggcatg gcttcaaaga aaacaccgcc actagaaact
      121 aactggattc aattttacga tcctaacggc accatcttcg ctggaataga agctttcacg
      181 cgccgatggg agtttactgc cggaattttg ttttgccagc caatagtacc ggaaaagtgt
      241 tttccggcgg acgcttctcg tagagatggt tacttgaggt catgtccttc tagctttgcg
      301 gcgggtaggt ctagagggtt tagaagaggg gataggctag cgaaccgtgt taggattaga
      361 gtggggagtt ggaatgtagg atctttgact agcaaatcac gtgagcttgt agatacttta
      421 attaagagaa aagtggacat tttgtgtgtt caagagacta gatggagagg tgaagaggcg
      481 gtttgtattg atgactacaa gttgtggttt tctggtttta gcgtagctag aaacggggta
      541 ggaatcatta taggacgccc ctatagggac catgttgtgg gtgtggatag gtttagcgat
      601 aggattatgt cggttaggtt agttgtccag gaggagactt tcatggtcat tagcgcttac
      661 gcacctcatg cgggtttagg agaagacgaa aagagacgtt tttgggaatc gttggatgca
      721 gttgtgagga ggtgccctgc tgaccatcga tttctcattg ggggagatct taatggacat
      781 ataggaactg atgtggaggg ttatgatgga gtccatgggg gctttggatt cggagttaga
      841 aatgaagaag ggcgctctat ccttgaattc gctgttgccc acgatttggt tgttgcaaat
      901 tctttcttca agaagacgga ggctcaactt gcaaccttcc atagtggggg gaatagtacc
      961 cagattgact atttattgct tcgcaaaggg gaccttaggt catgtggaga ctgtagggcc
     1021 ctaactacat gggtatgttc cactcaacac agattattgg tcatggactt agttcttcag
     1081 agacgagttt tcaagagtgc gagacccgct caacctcgaa ttctatggaa gaatctgaat
     1141 gaagagaagg ctgaaacatt taaagcttta gttttagaaa gagttgaggc aggagtggag
     1201 atggatactc atgttaatgc ggatcagatg tgggagagtc tggcgtccac tattagagag
     1261 gcagctaagg aatccttagg ggtggcagta gggacttcga aaggacatag gcctagtaga
     1321 gaatcatggt ggatcagtga cgaggttcaa accaaagtcg cgcttaagca actgaggttt
     1381 agggagctca ctgcatgtcg ggagggaaca accgaggata gaactatggc tgaagagaga
     1441 tataaagaag ccaagataga agctaagaag gttgttgcac gtgcaaaaga taaagcgtat
     1501 gaagatttgt ataagaaact agactctaaa gaaggagcaa atgatatcta caggattgca
     1561 aaagctagag agtatagaag gagggatata gataacatca aaggcataaa attacttagt
     1621 catactatta agctctggga gagagtgatc gagactagac ttcggcgaga aactactatt
     1681 tcggagaacc aatttggctt catgccaggg cgctcttcga tggaggcaat tcatattata
     1741 aggagtctta tagagaagtt tagggaaaag caaaagagcc tagagatggt tttcttagac
     1801 ttagaaaagg catatgattg tgtttcgcga aagctgattt ggaagacact taatgttaga
     1861 ggtatcccaa gcagatacat tagagctatt acggatatgt atgaaggggc gaagtcttgc
     1921 gttcgaactc ctgtgggaaa cacagagtat tttccgatag atgtaggcct gcaccaggga
     1981 tctgccctta gccctttcct tttcgctttg atccttgacg agttgtctcg gggattacaa
     2041 gagagcgtcc tctggtgttt gatttttgcc gacgatattg tgcttgtatc agaatccaaa
     2101 gaggatctta atagaagact agagcaatgg agggagacct tagaacaaaa cggaatacgg
     2161 atcagtagac aaaagacaga ataccttagg tgtgatttcg ccaagacaga ggatgaacaa
     2221 aatgttggag tacatattaa cattggggac cagatcttgc atccacaaga ttcgtttaga
     2281 tatctaggct cggtccttca caaatcgggg aggatcgacg aggatgtgac ccatcatatt
     2341 aaggcaggct ag
//
LOCUS       XM_071830964             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DExH-box ATP-dependent RNA
            helicase DExH15 chloroplastic-like (LOC139840715), mRNA.
ACCESSION   XM_071830964
VERSION     XM_071830964.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139840715"
                     /note="DExH-box ATP-dependent RNA helicase DExH15
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840715"
     CDS             1..447
                     /gene="LOC139840715"
                     /codon_start=1
                     /product="DExH-box ATP-dependent RNA helicase DExH15
                     chloroplastic-like"
                     /protein_id="XP_071687065.1"
                     /db_xref="GeneID:139840715"
                     /translation="MLPAVWFRFSRKGCDVEVKYLEDCKLLGKCEMSEVDLALKRFRI
                     KYPDAVRESAVKRILRGVAAHHAIFLPLWKSFIEELFSRGLVKVVFATETLAAGINMP
                     ARMAVISPLSKGSESGRVNLSPNEFLQMAGRAGRRVGKQHILGYFH"
     misc_feature    <1..>411
                     /gene="LOC139840715"
                     /note="Superfamily II RNA helicase [Replication,
                     recombination and repair]; Region: Dob10; COG4581"
                     /db_xref="CDD:443638"
ORIGIN      
        1 atgctgcctg cagtttggtt tagatttagc agaaaaggct gtgacgtgga agttaaatat
       61 ctcgaagact gcaagttatt aggcaagtgt gagatgagtg aagttgatct ggccttaaaa
      121 cgatttcgaa tcaagtatcc cgacgctgtt cgggaatcag ctgtaaagag gatacttcga
      181 ggggttgcag ctcatcatgc tattttttta cctctttgga aatcgtttat cgaagagtta
      241 ttttcaagag ggttggttaa agttgttttt gctactgaaa cacttgctgc aggtatcaac
      301 atgcctgcac gaatggccgt tatttcgcca cttagtaaag ggagtgaaag tggacgggtt
      361 aacttgagcc cgaatgagtt ccttcaaatg gcgggtcggg ctggacgtag agttggtaaa
      421 caacacattt tagggtattt ccattaa
//
LOCUS       XM_071830965             840 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840716), mRNA.
ACCESSION   XM_071830965
VERSION     XM_071830965.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..840
                     /gene="LOC139840716"
                     /note="uncharacterized LOC139840716; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840716"
     CDS             1..840
                     /gene="LOC139840716"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687066.1"
                     /db_xref="GeneID:139840716"
                     /translation="MDLVTRGRVGRRARVVQPRILWKNLYGVNAETFRANVVDRLSVE
                     GDNVAPNDANQIWNRMASNTRDVAKETLGMAIGTSRAHKSRRESWWLSDDVQTKVALK
                     QARFRELITLGEGIAKAREQRSRDLGNIKYIKDVAGQSIVREDLIRKRREEYFASLFC
                     RGRPERNGEPHEVREFQNNCFYTRINQEEVRLALRKMGRNKAVGPDQIPIEAWKCLGG
                     DGVRWLTNLFNTTFRSANMPMEWRLALGKSDGDEAPTRDKGFREPIRFHARSLVDGSD
                     SHS"
ORIGIN      
        1 atggacctag tcactagggg aagagttggc aggagggcta gggttgtaca acctagaatc
       61 ctttggaaga acctctatgg agtaaatgcg gagactttta gagcgaatgt tgttgataga
      121 ttgagtgtag aaggggataa cgttgcccct aatgacgcaa accagatatg gaatcgcatg
      181 gcgtccaaca ccagagatgt ggcaaaagag accttaggaa tggctatagg gacatcgaga
      241 gcccataaga gtagaagaga gtcgtggtgg cttagtgacg atgtccaaac gaaagtagca
      301 ttaaagcagg cgaggtttag ggagctcatt actcttggag aagggatagc caaagctagg
      361 gagcaaagaa gcagggactt aggtaacatc aaatatatca aggatgtagc gggtcaaagt
      421 atagtaagag aagatcttat taggaaaaga cgggaagaat attttgcatc ccttttctgt
      481 aggggaagac cagagcggaa cggtgaacct cacgaggttc gggagtttca aaacaactgt
      541 ttctacacga ggattaacca ggaggaagtt agattggccc tacgaaagat ggggagaaac
      601 aaagcagtag gaccagacca aattccgatt gaggcgtgga agtgcctagg aggcgatggg
      661 gttagatggt taacaaacct tttcaacacg acgtttagaa gcgcaaatat gcctatggaa
      721 tggagactcg ctttgggaaa gagtgatgga gatgaggctc cgacgcgaga caaaggtttc
      781 agagaaccaa ttcggtttca tgccaggtcg ctcgtcgacg gaagcgattc acatagttag
//
LOCUS       XM_071830966             834 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840717), mRNA.
ACCESSION   XM_071830966
VERSION     XM_071830966.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..834
                     /gene="LOC139840717"
                     /note="uncharacterized LOC139840717; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840717"
     CDS             1..834
                     /gene="LOC139840717"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687067.1"
                     /db_xref="GeneID:139840717"
                     /translation="MESEEKKASVDEEIKKVNQLPAHSTFASHRMRVLIIILQLFLFR
                     GLHHRTSQFVSWPSSSRTLTGKRIELVDTFLKSNVDIVCVQETRWKGEEAIEIQDYKL
                     WYSGSRIARNGVGIFLGKIHKDNVVDVGRFSDRIMSVSLIIKEETFTVISAYAPHAGL
                     GDAEKKSLWGLLDEVVRGCPADHRLIIGGDLNRHIGVEAEGYEGAHGGFGFGPRNEEG
                     RSILEFAIAHELVVANSFFKKRDAQLATFHSGGRSTRLTFCFFVKGNLGPVWTVRSFQ
                     L"
     misc_feature    181..765
                     /gene="LOC139840717"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atggaaagtg aagagaagaa ggcttcagtt gatgaagaaa ttaagaaagt gaatcaactt
       61 cctgctcata gcacatttgc ttctcatcga atgcgcgttc ttatcataat tcttcagctt
      121 tttttgttca gaggactaca ccacaggacg agtcaatttg tgtcatggcc ttcaagctca
      181 cgaaccttga ctggtaagag gattgagctc gttgatacct ttcttaagag taatgtagac
      241 atagtgtgtg ttcaagagac tagatggaag ggtgaagagg cgatagagat tcaggactat
      301 aagttgtggt actcgggttc taggatagca cggaacgggg taggtatctt cttaggaaaa
      361 atacataaag ataacgttgt tgacgtgggc aggtttagcg ataggattat gtcggttagt
      421 ttaattatta aggaggagac tttcacggtc attagtgcat acgcacctca tgcgggttta
      481 ggtgatgcgg aaaagaagag tttatgggga ttgttagatg aggtggtgag ggggtgccca
      541 gccgaccatc gactgattat agggggtgat ctgaatagac atataggagt ggaggcagaa
      601 ggttatgagg gagcccatgg aggctttggg tttggtccta gaaatgaaga ggggcgctca
      661 attcttgagt ttgccattgc ccacgagttg gtggtagcaa actctttctt caagaagagg
      721 gatgctcagt tagccacttt ccatagcggg ggtcgtagca ccagattgac tttttgcttc
      781 ttcgtaaagg ggaacttagg acctgtatgg actgtaaggt ccttccagct ttga
//
LOCUS       XM_071830967            1941 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840718), mRNA.
ACCESSION   XM_071830967
VERSION     XM_071830967.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1941
                     /gene="LOC139840718"
                     /note="uncharacterized LOC139840718; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840718"
     CDS             1..1941
                     /gene="LOC139840718"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687068.1"
                     /db_xref="GeneID:139840718"
                     /translation="MNKFAVLSESEEDFKSDEGDLNEDNPEEDVLATNEKSYSVLGAN
                     EIEGIDPASWNIRGMCQVDKQKEVAKFIKDEHLCMCAVIETHLKPGNINKACQNVFKH
                     WNWASNVVLSPNSCRIIVGWNNNVINSMILQVDRQVILCLVESIDKKIKFYCSYVYGS
                     NSGKERKSTLKKLDRIMCNNDFFSTYPQARGIFLPYMVSDHSPSLLNIPNCLVKRKRS
                     FRFMNHVTCKDEFLSVVEQAWKEQVVGHKMFQVVTKLKKLKKKFNSLNWNNGNVFSKV
                     TEMKDRLRKCQDAIDKNPHDHQSRVAAVNALNDYEKQNKKSLFCCSRRLKFSGDLVAD
                     QFVDHFQKFLGDNGKCIPLQRMGNIFENKLSNEESIAMVGPVTDEEVKSALFDIDDNK
                     ASGPDGYSSLFFKKAWNIVDDLLVFCHGDEFSVSVIKKGLDDFGLVSGLVPNLKITNL
                     LQFSVGKLPMKYLGVPLLAKKLGIQDCKSLINKIKKKVLNWKNRKLSYAGRLQLVASV
                     LSYMQNYWASVYILPCGVIDDIDRILKTFLWCQDGSLKGRAKVAWKDVCLPKDQGRLG
                     LKPLKEWNETFVVKNLWRIFTQSDSLWSKWLRDKIKPHIHVKHNLYSDDEYLWITNGG
                     TVVKFSTHQVWSDFRSNSNKVD"
ORIGIN      
        1 atgaataagt ttgctgtgtt atctgaaagt gaagaagact ttaagtctga tgagggggac
       61 ttaaatgaag ataatccaga agaggatgtt ttggctacta atgaaaagag ttatagtgta
      121 ttgggtgcaa atgagattga ggggattgac ccagccagct ggaatattag aggtatgtgt
      181 caggttgata aacaaaaaga agtggctaag tttattaaag atgaacatct gtgtatgtgt
      241 gctgttattg aaactcatct caaacctggt aatattaaca aggcatgtca gaatgtattt
      301 aagcattgga attgggcatc taatgttgtc cttagcccta atagttgcag aattattgtt
      361 ggatggaaca acaatgttat taatagtatg attcttcaag ttgatagaca agtcatcctt
      421 tgtttggttg aatctattga taagaagatt aagttttact gcagttatgt ttatggtagt
      481 aatagtggta aggaaaggaa gagtactctt aaaaagctgg atagaatcat gtgcaataat
      541 gattttttct ctacatatcc tcaggctcgt ggcatctttc ttccttatat ggtatctgat
      601 cacagtcctt cccttcttaa tatccctaat tgtttagtga aaaggaagag atcctttaga
      661 tttatgaacc atgttacatg taaagatgag ttcctttcag ttgttgagca agcatggaag
      721 gagcaggttg ttggccataa aatgtttcaa gtggtcacaa agttgaaaaa gcttaaaaag
      781 aaatttaatt ctttgaattg gaataatggg aatgtctttt ctaaagttac tgaaatgaag
      841 gatagattaa ggaagtgcca agatgccatt gataaaaatc ctcatgatca tcagagtaga
      901 gttgctgcag tcaatgcttt gaatgactat gaaaagcaaa acaagaagag cttattttgt
      961 tgcagcagaa ggctaaaatt tagtggtgat cttgttgctg accagtttgt tgaccatttt
     1021 caaaagttct taggggacaa tggtaaatgt attcctctac agagaatggg aaatattttt
     1081 gaaaataagc tttctaatga agagtccatt gctatggtgg gtcctgttac agatgaggaa
     1141 gttaaaagtg ctctttttga cattgatgac aacaaggctt caggacctga tggctattca
     1201 tcactctttt tcaaaaaagc atggaatatt gttgatgatt tacttgtctt ttgccatgga
     1261 gatgagttct ctgtgagtgt tattaaaaaa gggcttgatg actttggtct tgtttctggt
     1321 ttagttccaa atctcaagat cactaatctt ctgcagttct ctgttggtaa actgcctatg
     1381 aagtatttag gtgtccccct tttggccaaa aagcttggta ttcaagactg taaaagctta
     1441 attaataaga ttaaaaagaa agtgttaaat tggaagaata ggaagctctc atatgctgga
     1501 agattgcaat tggttgcttc tgttctctca tatatgcaga attattgggc ctctgtctat
     1561 attcttccat gtggtgttat tgatgatatt gatagaattt tgaaaacctt cttatggtgt
     1621 caagatggtt ctttaaaagg tagagctaaa gttgcttgga aggatgtgtg tttgcctaaa
     1681 gatcaaggta gattggggct taagccttta aaagagtgga atgaaacttt tgttgtaaaa
     1741 aacttatgga gaatttttac tcaatctgat tctttatgga gcaaatggtt gagagacaag
     1801 atcaagcctc atattcatgt taaacataac ctttattctg atgatgaata cttgtggatc
     1861 actaatggtg gaactgtggt caagttttca actcatcaag tatggagtga cttcagaagt
     1921 aatagtaata aagttgatta g
//
LOCUS       XM_071830969             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840720), mRNA.
ACCESSION   XM_071830969
VERSION     XM_071830969.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139840720"
                     /note="uncharacterized LOC139840720; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840720"
     CDS             1..837
                     /gene="LOC139840720"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687070.1"
                     /db_xref="GeneID:139840720"
                     /translation="MEQQRQHVNSDDEPLIIMCKLKLKDYIEPLLNFTLNLSIEQTLD
                     IDIIGLSNEFCSNLLKDDEHDCTFTLSDSSSDNFEGVPPYPLYKPLASALCKSILSGA
                     MQRTDSTTLLLHEDSSLKQKECEWNKVILEKGSDLIKMLESVEFELHCQEPFFSQLKD
                     GKKTVEGRCAGGSYNRIKSGSLVLFNKCLLLQVEGVHRYGSFSDMLAAEGLDKVLPGV
                     ETIEEGTQIYRKFYSEEKEKSDGVLAILVKPTSQLYDYLATILAALSYDGIQTLLGIV
                     KL"
     misc_feature    436..747
                     /gene="LOC139840720"
                     /note="ASC-1 homology domain, subfamily similar to
                     Pyrococcus furiosus Pf0470. The ASCH domain, a small
                     beta-barrel domain found in all three kingdoms of life,
                     resembles the RNA-binding PUA domain and may also interact
                     with RNA. ASCH has been proposed to...; Region:
                     ASCH_PF0470_like; cd06555"
                     /db_xref="CDD:119347"
ORIGIN      
        1 atggagcaac agcggcaaca cgtcaactcg gatgatgaac cattaataat aatgtgtaag
       61 cttaagctga aagattacat tgaaccgcta ttaaacttca cacttaattt atcaattgaa
      121 caaaccctag atattgatat tattggttta tctaatgaat tctgctctaa tctactcaaa
      181 gacgatgaac acgattgcac cttcacacta tcagattcat cttcagataa ttttgaaggt
      241 gttcctccat atccattata caaaccctta gcatcagctt tatgcaaatc gatattgtct
      301 ggtgctatgc agaggactga ttctactacg cttttgcttc atgaagattc ttccttgaaa
      361 cagaaagaat gtgaatggaa caaggttata ttggaaaaag gatctgatct gataaagatg
      421 ttggagagtg tggagtttga acttcactgt caagagcctt ttttctcgca actgaaagat
      481 gggaagaaaa cagttgaagg gaggtgtgct ggtggtagct ataaccgtat taaatcagga
      541 tctttggttc tcttcaacaa atgtttgctg cttcaagttg agggtgttca ccggtatggt
      601 tcattttctg acatgctagc tgcggagggt cttgataaag tgttaccagg tgtagaaacc
      661 attgaagaag ggacacaaat ttacaggaag ttttactcgg aagagaagga aaagtcagac
      721 ggtgtacttg caatacttgt aaagcccaca tcacagcttt acgattattt ggcaacgatt
      781 cttgcggcac tgagttacga tggtattcag acacttttgg gtattgtaaa actgtag
//
LOCUS       XM_071830970             990 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840721), mRNA.
ACCESSION   XM_071830970
VERSION     XM_071830970.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..990
                     /gene="LOC139840721"
                     /note="uncharacterized LOC139840721; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840721"
     CDS             1..990
                     /gene="LOC139840721"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687071.1"
                     /db_xref="GeneID:139840721"
                     /translation="MVFWAPAIAAGISNVFLEVFHALCARHLLGNLKSVSKRVKSYEW
                     HYWKMCKAYRKSDFDHHYGILARRIPDSAQSMNALSVHARKLPITMLLEFFRASVQQW
                     FWEHRNSADGLTTPVTPYAERKLGKRNRKSISWTVKSISQVKFEVLDMKKGGKVNLQD
                     KTCTCKQWQFSSIPCGHVMAVARYFVLRNVTTHVQKYFHTETYKSAYMQDINPLDHIS
                     EWIDPGHLQTILPPLVTKRQSGRPKSTDRIQSQGEDKDNFKSKRKCSRCLEYGHTRST
                     CTAHYDLSEGKQKSKCNSKTKAKPKGLVKGKGKGKREDSCSTQFGSTYNLSDD"
     misc_feature    481..561
                     /gene="LOC139840721"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atggtttttt gggcacctgc aatagctgct ggtatatcaa acgtatttct agaagtattt
       61 catgcactat gtgctagaca tttgttggga aacctcaaaa gtgtgtctaa aagggttaaa
      121 agttacgagt ggcactactg gaaaatgtgc aaagcgtata gaaaatctga ttttgatcac
      181 cactatggta tactagcacg acgtatccca gacagtgcac agtcaatgaa cgcactgtca
      241 gttcatgcga ggaaactccc gattacaatg cttcttgaat tctttagagc ttcagttcaa
      301 caatggtttt gggaacaccg aaactctgct gatggtttaa caacccctgt cacaccatat
      361 gcagagcgta agcttggtaa aagaaatcgt aagtctatta gttggactgt caaatcgata
      421 tcacaagtta agtttgaggt attggatatg aaaaaaggcg gtaaagtcaa tctacaagat
      481 aaaacttgca catgtaaaca atggcagttt tccagtatac cctgtggaca tgtaatggca
      541 gtagcaaggt attttgtcct acgtaacgtt actacacacg ttcagaagta tttccacact
      601 gaaacgtaca agtcggcata catgcaagat attaacccgc tagatcatat ttctgaatgg
      661 atagatccag gacacctaca aaccatccta ccgccattgg ttacaaagcg acaatcgggt
      721 agaccgaaga gtactgatcg tatacagtcc caaggagagg acaaagacaa tttcaaatct
      781 aaaagaaaat gcagtcgttg cttggaatat ggacatacta gatcaacttg caccgcacat
      841 tatgatcttt ctgaaggtaa acaaaagtcc aagtgtaact caaaaacaaa ggcaaagccg
      901 aaggggttgg taaagggcaa gggtaaagga aaacgtgaag actcatgctc aacacaattt
      961 ggctccactt ataatttgag tgatgattag
//
LOCUS       XM_071830971            1074 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840722), mRNA.
ACCESSION   XM_071830971
VERSION     XM_071830971.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 74% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1074
                     /gene="LOC139840722"
                     /note="uncharacterized LOC139840722; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840722"
     CDS             1..1074
                     /gene="LOC139840722"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687072.1"
                     /db_xref="GeneID:139840722"
                     /translation="MRLYQRFFVTNAPIQTLIPGVCGRHMATNACVICGLNMQLYFNV
                     GEDDESSSSSSSRFVLLPDEMVLQILNKLSDLKSLCICKLIPKRFDSIVFQVDTIFVI
                     ASSGLSWKISDGVTVRFNLDSFSSAIKFLSTFTKLKSLCIHMPSSNVYAGGIDITDDC
                     LFKWKIQLGNRVDSFLFLSPNLICDTNANVYEGLSNDDEKHDKYRIAITCLADESMRL
                     MLFRLLFDFRLLEYVKTSSSDNRGMVFFFNSREKISQVMKWIRSPIDSVLERVNQNLS
                     KTFSRISSCFVSLLKLPVSGYVMKGVTMIIFEMDDISEDSSLKNFDGFEQDNKEEAIY
                     NEAVMEIYKKHKGLIVEREVAIV"
ORIGIN      
        1 atgcgtttgt accagcgttt tttcgtgaca aacgccccga tacaaacgct cattccgggc
       61 gtttgtgggc ggcatatggc gacaaacgca tgcgttatct gtggtctaaa tatgcaactt
      121 tatttcaacg taggtgaaga tgacgagtct tcttcatctt catcttctcg gttcgttctt
      181 ttaccagacg aaatggttct ccaaatatta aacaaactta gcgatttgaa atcattatgc
      241 atttgcaaac tcattcccaa acgtttcgat tcaattgttt ttcaagtcga caccattttc
      301 gtgattgctt catccggttt gagttggaag atcagcgatg gagttactgt gcggtttaat
      361 ctcgactctt tttcatcagc aattaagttt ttgagtacgt ttacgaaact caagtctcta
      421 tgcatccaca tgccgtcgtc caatgtttat gctggtggta ttgatataac tgatgattgt
      481 ttgttcaagt ggaagattca actcggtaac agagttgatt cgtttttatt tctgtcaccg
      541 aatttaattt gtgatactaa tgctaatgtt tatgagggat tatcaaacga tgacgaaaaa
      601 catgataaat ataggattgc aattacctgt ttagcggatg agagtatgag gttgatgtta
      661 tttcgtttat tatttgattt taggttgttg gaatatgtaa aaacttcgag ttcagataac
      721 cgtggaatgg tttttttttt taacagtagg gaaaagattt ctcaagtgat gaagtggatt
      781 cgttcaccta ttgattctgt tctagaaagg gtgaatcaga atttgtcgaa gacttttagt
      841 cggattagtt cgtgttttgt ctccttattg aaattgccgg tttcagggta cgttatgaag
      901 ggagtaacta tgattatatt tgagatggat gatatttccg aggatagtag tttgaaaaat
      961 tttgatggtt ttgaacaaga taataaagag gaggctatct ataatgaagc tgtgatggag
     1021 atttataaga agcataaagg cttgatagtc gagagagagg ttgcgatagt atga
//
LOCUS       XM_071830972             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840723), mRNA.
ACCESSION   XM_071830972
VERSION     XM_071830972.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139840723"
                     /note="uncharacterized LOC139840723; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840723"
     CDS             1..627
                     /gene="LOC139840723"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687073.1"
                     /db_xref="GeneID:139840723"
                     /translation="MDFLALSIDLLFDSTSSEKEEEIQPRTRFQRQPRRFLNRDREAV
                     GQLLWSDYICENPTFPDDIFKRRFRMRKVLFLRIRDGILQHSYTPNAPDHFTFFQQRP
                     DALGRLGFSTIQKITCALRQLSYGMTEDIFDEYIKMAEKTGYVTLNNFCKCIIDLYGR
                     EYLRKPNATDIARLYWAHEEKHGFKGMLGSIDCMHWAWKNYPVAWKGQ"
     misc_feature    481..>624
                     /gene="LOC139840723"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggattttt tagccttaag tatcgatttg ttattcgatt caacgtcgtc cgaaaaagag
       61 gaagaaatcc aaccaagaac tcgttttcaa agacaaccac gacgtttttt aaatagagat
      121 cgtgaagcag tgggtcaatt attgtggagc gattacattt gtgaaaatcc gacgtttccg
      181 gacgacattt tcaagagacg atttcggatg cgcaaagttt tatttctccg tatccgagac
      241 ggtattcttc aacactctta tactcctaat gcccccgatc attttacttt tttccaacaa
      301 cgtccggatg cacttggacg tcttggtttc tcaactattc aaaaaataac ttgcgcgtta
      361 cggcaattgt cgtatgggat gaccgaggat atatttgatg aatatattaa aatggcggaa
      421 aaaacgggtt atgttacttt aaataatttt tgcaagtgta taattgactt atatgggcgg
      481 gaatatttga ggaagcctaa tgcaactgac attgctcggt tgtattgggc gcacgaggag
      541 aaacatggtt tcaagggaat gttgggtagt attgactgta tgcattgggc atggaaaaat
      601 tatcccgttg catggaaagg acaataa
//
LOCUS       XM_071830973             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139840724), mRNA.
ACCESSION   XM_071830973
VERSION     XM_071830973.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139840724"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840724"
     CDS             1..627
                     /gene="LOC139840724"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071687074.1"
                     /db_xref="GeneID:139840724"
                     /translation="MLEAVASYDMWIWHAFFGMAGSNNDINVLNHSPLFDSLRKDRVA
                     PSPFEVNGNQYPFGYYLADGIYPDWTTLIKGYTTPIEEPRKKFTKFQASVRKDVERTF
                     GVLQGRFAILKTPARVMSFNKMRRIMYSCIVMHNMIQEDNGFALSTWEQEWLDKPENR
                     PRRNIRRRVKDRRSREKEIRDRDVHDQLREDLTAHIWNLPPNFRSMHN"
     misc_feature    <4..429
                     /gene="LOC139840724"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcttgaag cggttgcttc atacgatatg tggatatggc atgcgttttt tgggatggcg
       61 ggttcaaaca atgacattaa tgtgttaaat cattctccgt tgtttgattc ccttcgtaag
      121 gatagagtcg caccttcacc gtttgaagta aacggaaacc agtatccctt tggttactac
      181 ttggcggacg ggatatatcc cgattggaca acactaataa aggggtatac gactcctatt
      241 gaagagccta ggaaaaaatt tactaaattt caagcgagtg ttagaaagga tgttgagcgt
      301 acatttggtg ttttacaagg tcggtttgcg attttaaaaa caccggcacg agttatgagt
      361 tttaataaga tgagaaggat aatgtatagt tgtattgtta tgcacaacat gatacaagaa
      421 gataacgggt ttgcgttaag tacttgggaa caagaatggt tagataaacc cgaaaaccgg
      481 cctcgtcgca atattcggag aagggtcaaa gatcgtcgat cacgagagaa agagattcgc
      541 gatcgagacg tgcacgatca acttcgtgaa gatttaacgg ctcatatttg gaacctcccg
      601 ccaaactttc gctcgatgca taactag
//
LOCUS       XM_071830974            1257 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein IQ-DOMAIN 5
            (LOC139840725), mRNA.
ACCESSION   XM_071830974
VERSION     XM_071830974.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1257
                     /gene="LOC139840725"
                     /note="protein IQ-DOMAIN 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840725"
     CDS             1..1257
                     /gene="LOC139840725"
                     /codon_start=1
                     /product="protein IQ-DOMAIN 5"
                     /protein_id="XP_071687075.1"
                     /db_xref="GeneID:139840725"
                     /translation="MGVSGKWIRALVGLKKQEKSQHSGEDVQVSIFFYVMQLCYVVCM
                     FLGEINLLLPKNRVGTGKSRHRRKGSIEINSDIFLNKVNVEDGNSSAIQDVTDSSSVS
                     HQMQDSSQMDQQMREEWAAMHIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAA
                     VTLRCMQALVRVQARVRARRVRIALEGESDQQKLQQQLQQEARVREIEQGWCDSVGSV
                     EQIQAKLIKRQEAAAKRERAMAYALAHQWQAGSKQAAPSGFEPDKSNWGWNWLERWMA
                     VRPWENRFLDINTRDEVKIGENNGSAAKETQEHVVKNQSKSVGKKFVAANVDSQLTTE
                     KLSQPESDGIGSSPVISTSMQETPVPLTVKSKSKQLTDSVKSRSHANTNERSATLGSQ
                     SKKRQSLPTNGKAGRGVGSSNRKVSL"
ORIGIN      
        1 atgggtgtct ccggtaaatg gattagagca cttgttggtt tgaagaaaca agaaaaatca
       61 caacactcag gagaagatgt gcaagttagt atctttttct atgttatgca actttgttat
      121 gtcgtatgta tgtttcttgg tgaaataaat ctgttgctgc caaagaatag agtcggtact
      181 ggaaagtctc gtcacagaag aaaaggttca atagagatca atagtgacat ttttctaaat
      241 aaggttaacg ttgaagatgg caatagtagt gcaatccaag atgttaccga ttcttcttcc
      301 gtatctcatc aaatgcaaga ttcatctcag atggaccaac agatgagaga agagtgggca
      361 gctatgcaca ttcaaactgc ttttcgagga tttttggcca ggcgagcact aagagctctt
      421 aaaggattgg tcagactaca agctcttgtg agaggccatg ctgtaagaaa gcaagctgca
      481 gttactcttc gttgtatgca agcgttagtg cgggttcagg cacgcgttcg agctcggcgt
      541 gttcgcattg cattggaagg tgagtcagac caacaaaaac ttcaacaaca acttcaacag
      601 gaggctcgtg ttcgagaaat agagcaagga tggtgtgaca gtgttggatc tgttgagcaa
      661 atccaagcaa agttgataaa gagacaagaa gcagctgcga aacgtgaaag agccatggca
      721 tacgctcttg ctcaccagtg gcaagctgga tcgaaacaag cagctccatc tggatttgaa
      781 ccagataaaa gtaactgggg ttggaactgg cttgagagat ggatggctgt tcgtccatgg
      841 gaaaatcgtt ttctcgatat taataccaga gacgaagtca agattgggga gaacaacggg
      901 tctgctgcta aagaaacaca ggaacatgtc gtcaaaaacc agtcaaaatc tgttggcaag
      961 aaatttgttg cagcaaatgt tgattcacaa ttgaccactg agaaactgag tcaacccgaa
     1021 tctgatggca ttggttcttc tcctgttata tccactagca tgcaagaaac tcctgtaccg
     1081 ttgactgtca agtcaaagtc aaagcaactc acagattctg tcaagtcaag atcacatgcc
     1141 aatactaatg aaaggtccgc gacgttgggt agtcagagca agaaacgtca atctctgcca
     1201 actaatggaa aagcaggaag aggtgttgga agctcaaaca gaaaggtctc cttataa
//
LOCUS       XM_071830976            1953 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840727), mRNA.
ACCESSION   XM_071830976
VERSION     XM_071830976.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1953
                     /gene="LOC139840727"
                     /note="uncharacterized LOC139840727; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840727"
     CDS             1..1953
                     /gene="LOC139840727"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687077.1"
                     /db_xref="GeneID:139840727"
                     /translation="MLLALATKNKVCFVDGTLAKNENDPVLVSQWERCNSVVLSWVLG
                     CLSEELYSGQIFSNLASVVWKDLKETYDKVDGSMTFKLHHQINTLKQNGNTLSEYYHK
                     LTSLWKQYDAMTSIPACTCGAGACTCAAGIASKNLINQQKLMQFLMGLDDDYMAIRSN
                     LLMRDPLPDVKVAYSVVSREESHKSVTCGDKGSKMHATSFVAQTNSVSKNNNFSGNRG
                     SSNNNNNFTKGPNPNYQCKKCNKLGHTIDRCYEIIGYPQNFQKKSSWSNGGGKSGSNK
                     YVPKANNSSISKDTPGTSNPSGTPAPSVPTSFSSEQMMKLLSLINEKPGNGIGHSNMA
                     GIILNKSIKFNSNFTKFFNANATKTKRNISQGWIIDSGASQHMTGFDILLENIVDVSD
                     LKLTVGHPNGTQAKVVKIGDLKLTNDLVLFDVLVIPEYCVSLMSVHKLSRDSGLTVSF
                     NDSKCYIQDLRKMITKGIGNEHDGLYLFNVIKQETKKGIIHQTSCPYSPQQNGVVERK
                     HRHLLNVARALMFQGGLPLNMWTECVLTACYLINRTPSSVRAGKTPYEYVFKKEPSLS
                     NLRCFGCLSYASVLNPNDKFSNRSERCILIGFSNEKKGYKLYSLNNKVVFFSRDVKFY
                     ETVFPYKMKEFAVQTDENQINHSNLF"
     misc_feature    <1462..1542
                     /gene="LOC139840727"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgctccttg ctttggccac taaaaataaa gtttgctttg ttgatggcac acttgctaaa
       61 aatgaaaatg atcctgtcct tgtcagtcaa tgggaaaggt gcaactcagt tgtcctgtct
      121 tgggtcttgg ggtgtctttc tgaagaattg tattcaggac aaattttttc aaatctggca
      181 tctgttgttt ggaaagattt aaaagaaacc tatgataaag tggatgggtc aatgaccttt
      241 aaactacatc atcaaattaa cactttgaaa caaaatggta acacactctc tgaatattat
      301 cacaaactta cttctctatg gaaacaatat gatgccatga cctctattcc tgcctgcaca
      361 tgtggtgctg gtgcctgcac atgtgctgca ggcattgcct caaaaaatct tatcaaccaa
      421 caaaaactta tgcaattttt aatgggcttg gatgatgact acatggccat taggagtaat
      481 ttgttaatga gggacccttt acctgatgtt aaagttgcat actctgttgt gtcacgggaa
      541 gagtctcaca aatctgttac ttgtggggac aaaggttcta aaatgcatgc cacatctttt
      601 gttgctcaaa ctaatagtgt gtccaaaaac aacaactttt ctgggaatag ggggagttct
      661 aataataata ataacttcac caaaggtccc aatcccaact atcaatgcaa aaaatgtaat
      721 aaacttggcc acactattga tagatgttat gaaatcattg ggtaccctca aaactttcaa
      781 aagaaatcta gttggtccaa tggtgggggt aaatctggat ctaataaata tgtccctaag
      841 gcaaacaatt catccatttc taaggatact cctggcacat ccaacccctc tggcacacct
      901 gctcctagtg taccaacctc tttttcaagt gagcaaatga tgaaactcct cagtcttatt
      961 aatgaaaaac ctggtaatgg gattggacac tccaacatgg caggtatcat acttaacaaa
     1021 agcataaagt ttaactcaaa tttcactaag ttttttaatg ccaatgccac taagactaaa
     1081 agaaacatta gtcagggttg gataattgac tcaggagcca gtcaacatat gactggtttt
     1141 gatatcctct tagaaaacat tgttgatgtg tctgacctca aactcactgt gggtcatcca
     1201 aatggaacac aagccaaggt tgtcaaaatt ggtgatctta aactaacaaa tgatcttgtt
     1261 ttatttgatg tgcttgtgat ccctgaatat tgtgtgagtt tgatgtctgt tcacaagttg
     1321 tcaagggata gtgggttgac tgttagcttt aatgactcaa aatgttatat tcaggacttg
     1381 aggaagatga ttactaaagg aattggaaat gaacatgatg gtctttatct ttttaatgtt
     1441 ataaaacagg aaaccaaaaa gggaataatt catcaaacct catgtcctta ctcaccacaa
     1501 caaaatggtg tggttgaaag gaaacatagg cacttgctta atgtagcaag agccctaatg
     1561 tttcaagggg gattgccttt aaatatgtgg actgaatgtg ttttgactgc ttgttatttg
     1621 atcaacagga ccccctcatc tgtgcgagct ggaaagaccc cttatgagta tgtttttaaa
     1681 aaggaaccta gtctctcaaa tttaaggtgt tttggttgtt taagttatgc ttctgtttta
     1741 aaccctaatg acaagttttc caataggtct gaaaggtgta ttttgattgg tttttcaaat
     1801 gaaaaaaagg gttacaagtt gtatagtctt aacaacaaag ttgtgttctt ttcaagggat
     1861 gtaaaatttt atgaaacagt ttttccatac aaaatgaaag aatttgctgt tcaaactgat
     1921 gaaaatcaaa taaatcattc aaaccttttt tga
//
LOCUS       XM_071830977             552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840728), mRNA.
ACCESSION   XM_071830977
VERSION     XM_071830977.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..552
                     /gene="LOC139840728"
                     /note="uncharacterized LOC139840728; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840728"
     CDS             1..552
                     /gene="LOC139840728"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687078.1"
                     /db_xref="GeneID:139840728"
                     /translation="MNLDCLILHRRDENGWNWQWKRENLGSRIEALINELNTVVSQAS
                     LTNEADSRIGAVCENEIFSVASTRKAIDNQFLLSMHHSPYWHKSVPKKVDIFIWRIAI
                     DRLPTRLNLWIRDVQFESIACPLCNLAVEVINHLSFSYGVVKKIWRRVNFWTAVKLPS
                     FDDWVAWLDCLITGLLQPKLRTG"
     misc_feature    184..417
                     /gene="LOC139840728"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaatcttg attgcttaat acttcataga agggatgaaa atggttggaa ttggcaatgg
       61 aaacgtgaga atctgggcag tcgtattgag gcgttaatta atgaactgaa tacagtggtt
      121 agccaagctt cccttacgaa tgaagccgat tcaagaatag gggcagtttg tgagaatgaa
      181 attttttctg ttgctagtac tcgcaaggca atcgataatc agtttttgct ttcgatgcac
      241 catagtccgt attggcataa gtctgtccca aagaaagtcg atatttttat atggcgtata
      301 gctatcgatc gtttaccaac gaggctgaat ttatggattc gtgatgtgca gtttgagagc
      361 attgcttgtc cgctttgtaa tcttgctgtt gaggttatta atcacctgtc attttcttat
      421 ggtgtggtaa agaagatttg gagaagggtt aacttctgga ctgcagtgaa attaccttca
      481 tttgatgact gggtcgcatg gttggattgt ctaatcactg ggttgcttca gcctaaatta
      541 agaacgggct aa
//
LOCUS       XM_071830978            1473 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G2/mitotic-specific cyclin
            S13-7-like (LOC139840729), mRNA.
ACCESSION   XM_071830978
VERSION     XM_071830978.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1473
                     /gene="LOC139840729"
                     /note="G2/mitotic-specific cyclin S13-7-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139840729"
     CDS             226..1473
                     /gene="LOC139840729"
                     /codon_start=1
                     /product="G2/mitotic-specific cyclin S13-7-like"
                     /protein_id="XP_071687079.1"
                     /db_xref="GeneID:139840729"
                     /translation="MTSNQPVVPVQQPIRADMKQKNGVQGERRNRRALGDIGNLVACP
                     TAVDIGKPQNRPMTRNYRAQLVETAQAAAAVKNVKEPVKPQAGGNNGKLAPKNNEETP
                     RRRSKKPSKSLTSVLTARSKVACGITTKPKDPVVNIDEADINNELAEVEYVEDIYTFY
                     KLTETEGGLRDYMNSQPDMNAKMRGILIDWLVEVHRKFDLMAESLNLTINIVDRYLSV
                     RTVPRRELQLVGIGALIVACKYEEIWPPEVSDVIAISDNAYSREQILTMEKSILGHLG
                     WYLTVPTPYVFLVRYIKASTPTDNEMENMVFFLTELGLIHYSVIMTNKPSKLAASAVY
                     AARCTLNKTPAWTETLKYHTGYDEDEIKDCARALVNFHACASETKLKAVYRKYLNPEK
                     GAVALFPPARSLMAEVGRGGQSL"
     misc_feature    619..1056
                     /gene="LOC139840729"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; Region:
                     CYCLIN_AtCycB-like_rpt1; cd20567"
                     /db_xref="CDD:410270"
     misc_feature    order(676..681,688..693,700..705,712..714,928..933,
                     940..954,961..969,1018..1020,1027..1032,1039..1044,
                     1051..1056)
                     /gene="LOC139840729"
                     /note="putative CDK interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:410270"
     misc_feature    1069..1425
                     /gene="LOC139840729"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; Region:
                     CYCLIN_AtCycB-like_rpt2; cd20511"
                     /db_xref="CDD:410215"
ORIGIN      
        1 aaattctccg gcatcttcaa accctaaaat cagtcgttct taaaaaagtt aacaaattgc
       61 gagtggattg aagcaattca aaagaaattg aagatcggtc ataccgtggc taccgaaaaa
      121 tcagaagaag gggaggcaaa caacagccgt ctccagtcgt ttttctcgtc aatcttgacg
      181 agtattggtg gtgttttcgg tcatattcaa gatcaagaag gagatatgac gtccaatcaa
      241 cctgttgttc cggttcaaca accgattcga gctgatatga aacaaaagaa tggggtacag
      301 ggcgaaagaa ggaaccggcg agcccttggt gatattggga atcttgtggc ctgtccaact
      361 gctgttgata tcggaaagcc tcaaaatcga ccaatgacta gaaattatcg cgcccagctg
      421 gtggaaactg cacaagctgc tgcagctgtt aagaatgtaa aggagcctgt taaaccacaa
      481 gcaggaggta ataatggcaa gttagctcca aaaaacaatg aggaaacacc aagaaggaga
      541 tcaaagaagc cttcaaaatc actcacttct gtcctcactg ctcgtagtaa agttgcttgt
      601 gggatcacaa caaaacctaa agatccagtg gtgaacatag atgaagcaga cataaacaat
      661 gaactggctg aagttgaata cgttgaagac atttacacgt tctacaagct cactgaaaca
      721 gaaggcggtt tacgtgatta catgaattca cagcctgata tgaatgctaa aatgagaggt
      781 attctgatag attggttagt tgaagttcac aggaagtttg acttgatggc cgaaagtctt
      841 aatctaacga tcaacatcgt tgatcgttat ctgtctgtga ggactgttcc aagaagggaa
      901 cttcaattgg taggaattgg tgcattgatt gtggcttgca aatatgaaga aatatggccg
      961 cctgaagtta gtgatgtcat tgcgatatca gacaatgcgt actctagaga acaaattctg
     1021 accatggaga aatcgatttt aggacactta ggatggtatt tgactgttcc tacaccgtat
     1081 gtgtttcttg tgcgttacat taaagcttca acaccaactg ataatgagat ggagaatatg
     1141 gtgtttttct tgactgaact tgggttgatt cactactcgg ttataatgac caacaaacct
     1201 tcaaagcttg ctgcctctgc tgtgtatgct gctcggtgca ccctgaataa gactccggct
     1261 tggactgaaa cactaaaata ccatactggg tatgatgaag atgaaataaa ggattgtgca
     1321 agggctttgg tgaactttca tgcttgtgct agtgagacca aactgaaggc tgtttacagg
     1381 aagtatttga atccggagaa aggtgcagta gctctttttc ctcctgcgag aagtcttatg
     1441 gccgaagttg gtagaggtgg ccaatcgtta tga
//
LOCUS       XM_071830979             378 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pentatricopeptide
            repeat-containing protein At3g23330 (LOC139840730), mRNA.
ACCESSION   XM_071830979
VERSION     XM_071830979.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..378
                     /gene="LOC139840730"
                     /note="putative pentatricopeptide repeat-containing
                     protein At3g23330; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840730"
     CDS             1..378
                     /gene="LOC139840730"
                     /codon_start=1
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g23330"
                     /protein_id="XP_071687080.1"
                     /db_xref="GeneID:139840730"
                     /translation="MNNRSTKIPACAHLKTLPLGQQLHGYIIRSHFDDNMFIASSLVN
                     MYAKCGNIKVAKLIFDRMKQHDLVTWTAMIMGCALHEHSHDAISLFRKMETEGFKPNS
                     VTFVAVLTACSHAGMVNKGLNFF"
     misc_feature    <13..>375
                     /gene="LOC139840730"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional; Region: PLN03081"
                     /db_xref="CDD:215563"
     misc_feature    118..195
                     /gene="LOC139840730"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    199..288
                     /gene="LOC139840730"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgaacaacc gttcaacaaa aattcctgct tgtgcacact taaaaacact accattagga
       61 caacaacttc atgggtacat aattaggagt cattttgatg ataatatgtt tatagctagc
      121 tcacttgtta acatgtatgc taaatgtggg aacattaaag tagctaaact gatctttgat
      181 cgtatgaagc aacatgattt ggtgacatgg actgcaatga taatgggatg tgcattacat
      241 gagcattcac atgatgcaat ttccttattt agaaagatgg agaccgaagg gttcaaacca
      301 aattctgtta cttttgtggc tgttttaact gcttgtagcc atgcaggaat ggtaaataaa
      361 ggcttaaact ttttttaa
//
LOCUS       XM_071830980            1403 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-D-glucosyl crocetin
            beta-1,6-glucosyltransferase-like (LOC139840731), mRNA.
ACCESSION   XM_071830980
VERSION     XM_071830980.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1403
                     /gene="LOC139840731"
                     /note="beta-D-glucosyl crocetin
                     beta-1,6-glucosyltransferase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840731"
     CDS             1..1350
                     /gene="LOC139840731"
                     /codon_start=1
                     /product="beta-D-glucosyl crocetin
                     beta-1,6-glucosyltransferase-like"
                     /protein_id="XP_071687081.1"
                     /db_xref="GeneID:139840731"
                     /translation="MGEPKRVLKVLMLPWLAHGHISPFLQLAKKLSKRNTFIYLCSTP
                     INLLSVTKKLSTPYTESIKLVEINLPTLPNLPPHYHTTNGLPPHLMDTLKEAFKMSKP
                     ELLDIYCSLKPDFVIHDCAVMWVGEVAWSVGIPTIDFVTFSAAFTSFYLKEMVAPLGE
                     FPFDRIHIHEFENDKVLPVINGITADDFERVNPTDSCNLRLIKSSREIEGKYIDYVTR
                     TSKRQVIPIGLLVDQEPLIEDDSLGLIHWLNKKEKRSCVFVSFGSEYFLTSEEMEEIA
                     HGLELCNLNFIWVVRVSKEKDGIKVEDVLPKGFFERVGERGRVVEGWAPQTMILSHQS
                     IGGFLSHCGWSSILESITFGVPIIAMPMHVDQPLNARLVVEVGVGLEIEREGTSGKVN
                     REVVAKVVREVVLGTRGDHVRKKVREISNDLMSKGEDEIDELTKRLIHINQERKHTM"
     misc_feature    19..1263
                     /gene="LOC139840731"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(55..60,64..66,508..510,517..522,532..534,622..624,
                     787..789,1021..1023,1027..1029,1033..1038,1045..1047)
                     /gene="LOC139840731"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(55..57,787..789,1021..1023,1027..1029,1033..1038)
                     /gene="LOC139840731"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    58..60
                     /gene="LOC139840731"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 atgggtgaac caaaaagagt tttaaaagtg ttgatgctac cttggttagc ccatggtcac
       61 atctcaccat tcttacagct agccaagaaa cttagtaaaa gaaatacttt catttacctt
      121 tgttctacac ccatcaattt gttatccgtc acaaaaaaac tgtccacacc ttacaccgaa
      181 tccatcaaac ttgtcgaaat caacctccca acgctgccta acctcccacc tcattaccac
      241 actaccaatg gcctccctcc ccatctcatg gacaccctca aagaagcctt taagatgtcg
      301 aagcccgagt tattagacat atattgcagc ctcaaacctg attttgttat tcatgattgc
      361 gcggtcatgt gggtaggaga ggttgcttgg tcagttggga tcccaactat tgattttgta
      421 acatttagtg ccgcatttac atccttttat ttgaaagaaa tggtagctcc cttgggcgag
      481 ttcccttttg ataggattca tattcatgaa ttcgagaacg ataaggttct tcctgtgata
      541 aatggtatta cagctgatga cttcgaaaga gttaacccaa cagatagttg caacttaagg
      601 ttgatcaaaa gctctagaga aattgagggt aaatatattg actatgtaac aaggacatct
      661 aaaagacaag ttatcccgat tggtcttcta gttgatcaag aaccccttat tgaagacgat
      721 tctttaggcc tcattcattg gcttaacaag aaggagaaac gatcatgcgt tttcgtgtca
      781 tttgggagtg agtatttttt gacaagtgag gaaatggaag agatagcaca tgggttagaa
      841 ctatgcaact taaacttcat atgggtggtt agagtttcta aagagaagga tggaatcaag
      901 gttgaagatg ttttgccaaa aggatttttc gagagggtag gcgagagagg aagagtagta
      961 gaagggtggg ctccacaaac tatgatctta agccatcaaa gtattggagg gtttttaagt
     1021 cattgtggat ggagttcaat tttggaaagc ataacatttg gtgttccaat aatagcaatg
     1081 ccaatgcacg tagatcagcc tttaaatgct aggttggtcg tagaggttgg tgtgggattg
     1141 gagattgaaa gagagggaac gagtggcaaa gtgaatcgag aagtggtggc gaaagtggtt
     1201 agggaggtgg tattggggac gcgaggggac catgtgcgaa aaaaagttag ggaaattagt
     1261 aacgatttga tgtcaaaggg agaggacgag atcgacgaac taactaaacg attgatacat
     1321 atcaatcaag agaggaagca taccatgtag gaggttttta ggttaaaact tcccaatatt
     1381 tctttctatg agctacctat ata
//
LOCUS       XM_071830981            1935 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pentatricopeptide
            repeat-containing protein At3g23330 (LOC139840732), mRNA.
ACCESSION   XM_071830981
VERSION     XM_071830981.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1935
                     /gene="LOC139840732"
                     /note="putative pentatricopeptide repeat-containing
                     protein At3g23330; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139840732"
     CDS             1..1935
                     /gene="LOC139840732"
                     /codon_start=1
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g23330"
                     /protein_id="XP_071687082.1"
                     /db_xref="GeneID:139840732"
                     /translation="MESVQTVIKTLLKHPTQINSKSQIKQIHGQIIKCFPDFTSELLS
                     IYSKLNLLPESVILFNELSSPSILAWKSMIKCYTSNSYFLESLNCFVKMRDFGVYPDH
                     NVFPSVLKSCTHLMYFKFGESVHGCVIRVGLEFDVFTGNALLSMYSKLQKFNALQMFD
                     ESPDRMTVDQNESILNGNNNLSNKVDQGLNKPSLFNLTSNQSVRKVFESMPTRDVVSY
                     NTLVLGYAQMNMYAEAMMMIREMSNDNVKPDAFTLSNVLPIVAEYMDVCKGKEIHGYA
                     VRHGLDKNEFIASGLTDMYASCNMLEDSYRLFSTLPKKDYVSWCSIIAACVQNGLFDE
                     GLRLFRQMLSVDIKPVPISFSSIIPACAHLTTLPLGQQLHGYIIRSHFDDNMFIASSL
                     VNMYAKCGNIKVAKRIFDHMKQHDLVTWTAMIMGCALHGHAHDAISLYKKMEIEGFKP
                     NSVTFVAVLTACSHAGMVNKGLNFFKKMVKCYDITPEFEHYACMVDLLGRAGKLDEAF
                     GFICRMPENNNASVWLPLLAACRVHKNVELAEKVVTRIREFDSENIGAYTLLSNTYSS
                     VGRYKDATNMKSMLFKKANRKEPACSWIRIGNTIHGFVAGDESHPYYDSITNALDILF
                     EQMKNEEFVADTTVNFLMFF"
     misc_feature    <109..1884
                     /gene="LOC139840732"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    124..192
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    205..288
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    304..393
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    409..483
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    649..732
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    748..942
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    952..1035
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1168..1245
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1255..1338
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1354..1443
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1462..1551
                     /gene="LOC139840732"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atggaatccg tacaaacagt tatcaaaacc ttactaaaac acccaacgca aatcaactca
       61 aaatcccaaa tcaaacagat tcatggtcaa atcatcaaat gctttcctga tttcacttct
      121 gagcttcttt caatttactc aaaactcaat cttttaccag aatccgtaat cctcttcaac
      181 gaactctcat ctccctcaat tcttgcatgg aaatcaatga tcaaatgcta cacttccaac
      241 tcctactttt tagaatcatt gaattgtttt gttaaaatga gggattttgg agtgtaccca
      301 gatcataatg tgtttccttc agtgttaaaa tcatgtaccc atttgatgta tttcaagttt
      361 ggggaatctg ttcatggttg tgttatccga gttggacttg aattcgatgt ttttacaggg
      421 aatgcactgt tgagtatgta ttctaagttg cagaagttta atgcactaca gatgttcgat
      481 gaaagtcctg acagaatgac agttgatcaa aatgagagta tattaaatgg aaacaataat
      541 ttatcgaaca aagttgatca aggcttaaac aaaccgagtc ttttcaattt aacgagtaat
      601 caaagtgtga gaaaagtttt tgaatcaatg ccaacacgag acgttgtttc ttataacacg
      661 cttgttttag ggtatgctca aatgaacatg tatgctgaag ctatgatgat gattagggag
      721 atgagtaatg ataatgtgaa gcctgatgcg tttactttat caaatgttct tcctatcgtt
      781 gcagaatata tggatgtttg taagggaaaa gagatccatg ggtatgcagt tagacatggg
      841 cttgataaaa atgagttcat tgcaagtgga ttgaccgata tgtacgcaag ttgtaacatg
      901 ttggaagatt cgtatcgttt attttctaca ctgcctaaaa aggactatgt ttcatggtgt
      961 tctatcattg cagcatgtgt gcaaaatggt ttgtttgatg agggtttgag attgtttaga
     1021 caaatgttaa gtgttgatat taaacctgtc ccgatttcgt tttcgagtat tattcctgct
     1081 tgtgcacact taacaacact accattagga caacaacttc atgggtacat aattaggagt
     1141 cattttgatg ataatatgtt tatagctagc tcacttgtta acatgtatgc taaatgtggg
     1201 aacattaaag ttgctaaacg gatttttgat catatgaagc aacatgattt ggtgacatgg
     1261 actgcaatga taatgggttg tgcattacat gggcatgcgc atgatgcaat ttccttatat
     1321 aagaagatgg agattgaagg gttcaaaccg aattctgtta cttttgtggc tgttttaact
     1381 gcttgtagcc atgcaggaat ggtaaataaa ggtttaaatt tttttaagaa aatggtaaaa
     1441 tgttatgata taactcctga attcgagcac tacgcttgta tggtggatct tttgggtcgg
     1501 gctgggaaat tagatgaagc ttttgggttc atatgccgaa tgcctgaaaa taataacgct
     1561 agcgtttggt taccgttgct agctgcttgt agggtccata aaaacgtgga attggctgaa
     1621 aaggttgtca cgcgtatacg tgaatttgat agtgagaata ttggcgcgta tacgttgtta
     1681 tcgaatacgt attcttctgt cggaaggtat aaggatgcaa cgaatatgaa aagtatgttg
     1741 tttaagaaag caaatagaaa ggaaccagct tgtagctgga tcagaattgg caatacaatt
     1801 catggttttg ttgctggaga cgaatctcac ccatattatg atagtataac taacgcatta
     1861 gatatacttt ttgaacagat gaaaaatgag gaatttgttg cggatacaac agtgaatttt
     1921 ttaatgttct tttag
//
LOCUS       XM_071830982             848 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NEDD8-conjugating enzyme
            Ubc12-like (LOC139840733), mRNA.
ACCESSION   XM_071830982
VERSION     XM_071830982.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..848
                     /gene="LOC139840733"
                     /note="NEDD8-conjugating enzyme Ubc12-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139840733"
     CDS             1..555
                     /gene="LOC139840733"
                     /codon_start=1
                     /product="NEDD8-conjugating enzyme Ubc12-like"
                     /protein_id="XP_071687083.1"
                     /db_xref="GeneID:139840733"
                     /translation="MVQCDSVTIENINKWNEGMNMPKLKEKQWELSESSKGKPSSKKK
                     SAGELRLHKDISELNLPNTCSIWFPNGKDDLMHFEVTIRPDEGNYLGGSFTFMFEISP
                     IYPHEAPKVRCNKKVDHPNMDSNGNVCLKILREDWKPVLNINTIICVLDHLLVEPNRE
                     DFVKALPKRRRLFKSRFHPPPMTY"
     misc_feature    136..522
                     /gene="LOC139840733"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzymes E2 F, E2 M and
                     related proteins; Region: UBCc_UBE2F_UBE2M; cd23794"
                     /db_xref="CDD:467414"
ORIGIN      
        1 atggtgcagt gtgactctgt gacaatagag aatatcaaca aatggaatga gggaatgaat
       61 atgcccaaat tgaaggagaa gcaatgggag ctttctgaaa gttccaaagg gaagccatca
      121 agcaaaaaga aaagtgcggg ggagttgcgt cttcacaaag atattagtga gttaaaccta
      181 cccaatacat gtagcatatg gttcccaaat ggaaaagatg atctaatgca ctttgaagta
      241 accattcggc cagatgaggg taactactta ggtggctcat ttacgtttat gttcgagatt
      301 tccccaatct atccccatga ggcaccgaag gtcagatgca acaaaaaggt ggaccaccct
      361 aacatggact cgaatggaaa tgtttgcctc aaaatccttc gagaagactg gaaaccagtt
      421 ttaaacatta acactatcat ctgtgtattg gatcatctgt tggtggaacc aaatcgtgag
      481 gatttcgtaa aagcgttgcc aaagagacgt aggttgttta aatcccgatt tcacccgcca
      541 cccatgactt actgatgggc cagcattcaa caaacataca tgatttgtgc ggtgacgaaa
      601 aaataaaaaa ataaaaaaat atgaacttaa tagatgatgc atttggttgt taccgtgtaa
      661 gtaaaactaa ttggtctcgt atgaatttaa cctccgaggg aagatgatgg ttattacaga
      721 cttggctaaa tgtgtatgga taaattgttg ttaaaaatgt tgcaactttt gtatggttct
      781 aattgtttca tttcgggtct actgattctt tggtagtctt gaattggttt ttagtagggg
      841 tgtaaatg
//
LOCUS       XM_071830983             708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840734), mRNA.
ACCESSION   XM_071830983
VERSION     XM_071830983.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..708
                     /gene="LOC139840734"
                     /note="uncharacterized LOC139840734; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840734"
     CDS             1..708
                     /gene="LOC139840734"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687084.1"
                     /db_xref="GeneID:139840734"
                     /translation="MAKRSSIETNKNIDGDDGFVHGDGEEWVVVVMVAECGGVNKASL
                     LLNGSPSAEFDIERGLRQSDPLSPLLFIIGMEGINAALKDATASSLYSGLLVNNQVKG
                     MIRMRPTFSQFWDVSLLLLASKINIQKSCLYGVAINAQEMESEHAFISIGGRSTLVKS
                     VLGSLGTFFMSLFKMPVSFLKNLEAIRASFLWGGSDNVRKIHWVMWDSILNPIEFSVL
                     GVNSLKSLNLALLYKWR"
     misc_feature    <175..390
                     /gene="LOC139840734"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    187..189
                     /gene="LOC139840734"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggcaaaac gtagcagcat cgaaacaaac aaaaatattg atggtgacga tgggtttgtt
       61 catggtgatg gagaagagtg ggttgtggtt gtgatggtgg ccgagtgtgg tggtgtcaac
      121 aaggcgtctc tcctactaaa tggcagtcct tcagcggaat ttgacataga aagagggctc
      181 cgtcagagtg acccgttatc tcctctactt ttcatcatcg gaatggaggg tatcaatgcg
      241 gcgcttaagg atgcaactgc ttcttcttta tatagcggtt tgttggtaaa taatcaggtg
      301 aaaggaatga ttcgaatgcg gccaaccttc tcacaattct gggatgtttc attgctgctt
      361 ctggcctcca aaataaacat ccaaaaatct tgtctctatg gtgtggcaat caacgctcaa
      421 gagatggaaa gtgaacatgc tttcatttca attggcggta gatcgactct tgtaaaatcg
      481 gttttgggat cacttgggac cttctttatg tctctcttca aaatgcctgt cagttttctt
      541 aaaaatttag aagctatccg tgcctctttt ctatggggtg gaagcgataa cgttaggaaa
      601 attcattggg ttatgtggga ttctatttta aatcctatcg aattcagtgt ccttggtgta
      661 aatagtctaa agtccttgaa tttggcgttg ctctataaat ggcgatga
//
LOCUS       XM_071830984            1683 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840735), mRNA.
ACCESSION   XM_071830984
VERSION     XM_071830984.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1683
                     /gene="LOC139840735"
                     /note="uncharacterized LOC139840735; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840735"
     CDS             1..1683
                     /gene="LOC139840735"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687085.1"
                     /db_xref="GeneID:139840735"
                     /translation="MESHLLMVGAITPRAPHVNTRLKLLSIETLTRSYFDHGLPFLDV
                     IATDDQGERIGLTVKNTHKKKYEELLKEQQIYVFKSIGTLKLSNHNSLNHWTHDCKLI
                     FTNKTTFVPVPPTQWSGSDGFKFIPFIDLITCQLSEKHTADVIGCVNYYDREPKFYGS
                     SNDEKSKYINLELKDLDGSIVSCTLFRTYMVKFLAYMKQLDSSQCVILVIQFGRTKKF
                     QHQLTVGTDWTHTRVFMDSDLPVIEDFRKRYLAVQNDNDSQSSFAPSFTPSLTPKGKP
                     LDEWFQNVLCVGCDDLSINHSTINTNTLFGGYIVVVNGTVFAAITWEGTFVVEAEIIA
                     IEPHEPWSYIACKKCHKTAPTTSKDVDLTLDIDQQLLLKRICRDCGEHPQVALRFKVS
                     VRVVDATGIATFTVFESLVKKYVTESAYEIKKALPEDEDQSVELEALVGNTLLCKLEI
                     TGNHKKYKQTNFTVKEYSTDEVFVDHFRQQFKIDRPKFKQMKLEAATGDMSVSPKCGS
                     SNLSANEKHMVDLASSTGYTPPKKQIKEEPNESPLSVKSSTTRHKKFNLGDD"
     misc_feature    <124..327
                     /gene="LOC139840735"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    427..747
                     /gene="LOC139840735"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(427..429,616..618,622..624,628..630,691..693)
                     /gene="LOC139840735"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(442..444,451..456,508..519,523..525,544..552,
                     556..558,613..615,640..648,667..675)
                     /gene="LOC139840735"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
     misc_feature    976..1392
                     /gene="LOC139840735"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(979..981,1327..1329,1333..1335,1339..1341)
                     /gene="LOC139840735"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(994..1002,1174..1185,1189..1191,1207..1215,
                     1219..1221,1324..1326,1345..1353,1381..1389)
                     /gene="LOC139840735"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggaatctc atttactcat ggtcggagca attactccta gagctcctca tgtcaacacc
       61 cgtttgaaat tgcttagcat tgaaacactt acaagatcct attttgacca cggtttacct
      121 ttcctcgatg tgattgcaac tgatgatcag ggagaaagaa ttggccttac tgtgaaaaat
      181 acgcataaga aaaaatatga ggaattattg aaagagcaac aaatctatgt ttttaaaagt
      241 attggtacat taaagctaag caaccataat agtctaaatc attggactca tgattgcaaa
      301 cttattttca caaacaagac cacatttgtg ccagttcctc ccactcaatg gtctggaagt
      361 gatggtttca agtttattcc atttattgat cttataacct gtcaattatc agagaaacac
      421 acggcagatg taattggttg tgtcaattac tatgatcgtg aaccaaaatt ttatgggagt
      481 agcaatgatg aaaagtccaa gtacatcaac cttgagctca aggatttaga cggttcaata
      541 gtgtcttgca ccttatttag aacatatatg gttaagtttt tggcatacat gaaacaacta
      601 gactcaagtc aatgtgtgat tttggttatt caatttggtc gcacaaagaa attccaacac
      661 cagctaactg ttggtactga ctggactcac acaagagtgt ttatggacag tgacttaccg
      721 gtcatcgaag atttcaggaa gaggtatctt gcagtacaaa atgataatga ttctcagtct
      781 tccttcgcac cttcttttac accatcattg acacctaaag ggaaaccact ggatgaatgg
      841 tttcagaacg ttctttgtgt cgggtgtgat gacttgtcaa ttaatcattc tacaatcaac
      901 actaacactt tattcggtgg ttacattgtt gtagtcaatg gcactgtatt tgcagcaatc
      961 acttgggaag gtacatttgt tgttgaagca gagatcattg caattgaacc gcacgagccg
     1021 tggtcataca ttgcatgtaa aaaatgtcat aagacagcac caacaacttc aaaggacgtt
     1081 gatcttacgc ttgacattga ccaacagttg ttattgaagc gtatttgcag agattgcggt
     1141 gaacatccac aggttgctct taggttcaag gtaagcgtcc gtgttgtgga tgcaactggg
     1201 atagcaacat tcaccgtttt tgaatcactt gtcaagaaat atgttaccga atcagcttat
     1261 gagattaaga aagcgctacc ggaagacgaa gatcaatctg ttgaattaga agcattagtt
     1321 ggtaatactc tattgtgcaa gctggaaatt actggtaacc acaagaaata caagcagacg
     1381 aactttacag ttaaggagta ttcgactgat gaagtatttg tggatcactt ccgtcaacag
     1441 ttcaagattg acaggccgaa attcaaacaa atgaaacttg aagctgcaac tggtgacatg
     1501 tcagtttctc caaagtgtgg ttcttccaac ctttcggcta acgagaaaca catggtggat
     1561 cttgcaagca gcacaggata cactcctcca aaaaaacaga ttaaagaaga accaaatgaa
     1621 agcccattgt cggttaagtc atcaacaacc cgtcacaaga agtttaacct tggtgatgat
     1681 tag
//
LOCUS       XM_071830985             801 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840736), mRNA.
ACCESSION   XM_071830985
VERSION     XM_071830985.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..801
                     /gene="LOC139840736"
                     /note="uncharacterized LOC139840736; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840736"
     CDS             1..801
                     /gene="LOC139840736"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687086.1"
                     /db_xref="GeneID:139840736"
                     /translation="MLESNKNVTVAERLKIINSTTTTSWNWSRTPNGRCLTELTELNH
                     LIETISLSDKPDTWKWNLDQSGIFTTKALATILDNLKLDTPSSTFKTPRNKLLPQKIN
                     IFIWRVLYGRIPTRVELDKRGVDLDSILCPLCNLHTESIEHILFQCTLSTSIWNSILQ
                     WWNLPVDTFTNLRDIILSDQSLTTQQNGSNIWLAVKWASTYIIWKYRNLKVFGKKEWC
                     TATILSEIQTQSFAWISKRHKKSTVMWHQWLINPVSYISSNHQRSGIG"
     misc_feature    <280..462
                     /gene="LOC139840736"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcttgaat caaacaaaaa cgtcacggtt gcggaaagac tcaagataat caactcaaca
       61 acaactactt catggaattg gtcccgtaca cccaacggta gatgcctcac cgaattaaca
      121 gaactaaatc accttataga aacaatcagt ctctcagata agcctgatac ctggaaatgg
      181 aatcttgacc aatccggcat atttacaaca aaagcattag ccaccatcct cgacaaccta
      241 aaacttgata caccatcttc tacctttaag acacctagaa ataaactctt accccaaaaa
      301 attaacatct tcatttggag agttctatac gggagaatcc cgacgcgcgt agaactcgac
      361 aaaagaggtg ttgatctcga ctcaattctt tgcccactat gcaacctaca cacagagtct
      421 attgaacaca tactatttca atgcacgctt tcaacatcta tttggaattc aatcctacaa
      481 tggtggaacc tccccgtaga caccttcacc aatctccgtg acataatctt aagtgatcag
      541 tccctcacta cgcaacaaaa tggttccaac atttggctag ccgttaaatg ggcatccact
      601 tacatcatct ggaaatacag gaatcttaag gttttcggca aaaaagaatg gtgcaccgcc
      661 acaattttat ctgaaatcca aacacaatca ttcgcatgga tatccaaaag acacaaaaaa
      721 tcaacggtta tgtggcatca atggctaatc aatcccgtct catatatctc ctcgaatcat
      781 caaagatccg gcattggtta a
//
LOCUS       XM_071830986             378 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides agamous-like MADS-box
            protein AGL66 (LOC139840737), mRNA.
ACCESSION   XM_071830986
VERSION     XM_071830986.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..378
                     /gene="LOC139840737"
                     /note="agamous-like MADS-box protein AGL66; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840737"
     CDS             1..378
                     /gene="LOC139840737"
                     /codon_start=1
                     /product="agamous-like MADS-box protein AGL66"
                     /protein_id="XP_071687087.1"
                     /db_xref="GeneID:139840737"
                     /translation="MGRNKLPMKRIDNNTSSLVTFCKRRNGLIKKAYELSVLCDIDIT
                     LIMFPPSCRLNHFSCKRRTEDVLNRFINQSDSERGSVIQHREVEIYAFIHLFIPVETS
                     ISITTSHTKQPHFKHLKLSFNFH"
     misc_feature    4..228
                     /gene="LOC139840737"
                     /note="MCM1, Agamous, Deficiens, and SRF (serum response
                     factor) box family of eukaryotic transcriptonal
                     regulators. Binds DNA and exists as hetero and
                     homo-dimers. Composed of 2 main subgroups: SRF-like/Type I
                     and MEF2-like (myocyte enhancer factor 2)/ Type...;
                     Region: MADS; cl00109"
                     /db_xref="CDD:469617"
     misc_feature    order(4..18,22..24,37..39,43..45,55..60,64..72,76..81,
                     88..93,97..102,112..114)
                     /gene="LOC139840737"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238067"
     misc_feature    order(61..63,70..72,82..87,94..99,103..117,130..132,
                     136..138,142..144,160..162,166..168,172..174)
                     /gene="LOC139840737"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238067"
     misc_feature    order(85..90,97..99,109..111,157..180)
                     /gene="LOC139840737"
                     /note="protein interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:238067"
     misc_feature    175..177
                     /gene="LOC139840737"
                     /note="putative phosphorylation site [posttranslational
                     modification]; other site"
                     /db_xref="CDD:238067"
ORIGIN      
        1 atgggtcgaa ataagcttcc aatgaaaaga atcgataaca atacaagtag tttggtcaca
       61 ttttgcaaac gaagaaatgg gctcatcaag aaggcttatg agctatcggt tttatgtgat
      121 atcgatatca ctcttatcat gtttccacct tcgtgccgtc tcaatcattt ttcgtgcaaa
      181 cgaagaaccg aagatgtact caatcggttc ataaatcaat ctgattccga aagaggaagt
      241 gtgatccaac atagagaggt cgaaatctat gcttttatac atctatttat accagttgaa
      301 acttcaatat caattacaac atcacataca aaacaaccac atttcaaaca cctcaaactg
      361 agttttaatt ttcactga
//
LOCUS       XM_071830987            1347 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840738), mRNA.
ACCESSION   XM_071830987
VERSION     XM_071830987.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1347
                     /gene="LOC139840738"
                     /note="uncharacterized LOC139840738; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840738"
     CDS             1..1347
                     /gene="LOC139840738"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687088.1"
                     /db_xref="GeneID:139840738"
                     /translation="MHLLHENLFSSLNPEQLSIYQRVIHAVTEKKGGLFFLYGPGGTG
                     KTFLYNTILAKLRSERLIVIAVASLGIASLLLPSGRTAHSRFVIPLELMENSTCGIKQ
                     KTHLAALIQEARLIIWDEAPMTQRFAFKALDKTLRDILGAKDDANRLKLFGGMPILLG
                     GDFRQILPVVTKGKRQEVVHACINRSDLWKHCELHTLSRIMRVNEYTADGHVDARKHE
                     FNKWVLNVGEGKVPALCKDCEDEPTWIQIPDEFIIKSDRPPIEAIVDTIFPNFINKQE
                     NEDYLHERAILTPRNDDADEINKNMFKKLQGAKMTFKSSDEICKGSTDNIDQHCSYPV
                     EFLNKLNFSGVPPHKLKLKLGQPIMLLRNLSPSTGMCNGTRLIITDFNKFVLQARIIT
                     GSHVGKMVIIPRIVLTSTEKMALCNATNTIPSAAMLCDDDKQKSRAIVEIGRPISP"
     misc_feature    34..1143
                     /gene="LOC139840738"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(121..141,355..357)
                     /gene="LOC139840738"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgcatttac tccatgagaa cctcttcagc tcactcaacc cagaacaact atcaatatac
       61 caaagggtta tacatgcagt taccgaaaaa aaaggaggac tttttttctt atacggtccc
      121 ggaggtacgg ggaaaacatt cctatacaac accattctcg caaaattgag atcagaaaga
      181 ttaattgtta ttgcagttgc atcattaggt attgcgtcac tgctattacc cagcgggcgg
      241 actgctcata gccgatttgt gatccccctg gaactaatgg agaatagtac atgtggcatt
      301 aaacaaaaga cgcaccttgc agcacttatc caagaggcca gattaattat ttgggatgag
      361 gctccaatga cccaacgatt cgctttcaaa gcgttagaca aaactttaag agatattttg
      421 ggtgctaaag atgatgcaaa cagattaaag ttatttggtg gtatgcctat tttattgggc
      481 ggtgacttca gacaaatact ccccgtagta acgaaaggca agagacaaga agtagttcat
      541 gcgtgtatta ataggtcaga tttatggaaa cattgtgaat tgcatacgct ttcacgtatt
      601 atgagggtca acgaatacac agccgatggt cacgttgatg cccgcaaaca cgaattcaat
      661 aaatgggtcc tcaatgtagg tgaaggtaag gtccccgcat tgtgtaaaga ctgtgaggat
      721 gaaccaacat ggatacagat acccgatgaa ttcattataa aatctgacag acccccaatt
      781 gaagcaatcg tggacaccat atttccaaat ttcatcaaca agcaagaaaa tgaagactat
      841 ttgcatgaaa gagctatttt gacacctcgg aatgatgatg ctgatgaaat caacaagaat
      901 atgttcaaga aattgcaggg tgcaaagatg acattcaaaa gctcggatga aatttgcaag
      961 ggctcaactg acaacatcga ccaacactgt tcatatccgg ttgaattctt aaacaagcta
     1021 aatttctcgg gcgttcctcc tcacaaactg aaactaaaac taggccagcc aataatgctt
     1081 ttacgaaatc tcagtcctag tacaggcatg tgtaatggaa cacgcctcat cataaccgac
     1141 tttaacaagt tcgtacttca agctagaatc atcactggat cacatgtagg gaaaatggta
     1201 ataatcccta gaattgtcct tacttcaaca gaaaaaatgg ccctttgtaa tgcaacaaat
     1261 acaattccca gtgcggccat gttatgtgat gacgataaac aaaagtcaag ggcaatcgtt
     1321 gaaattggtc ggcctatatc tccctaa
//
LOCUS       XM_071830988            1338 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840739), mRNA.
ACCESSION   XM_071830988
VERSION     XM_071830988.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1338
                     /gene="LOC139840739"
                     /note="uncharacterized LOC139840739; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840739"
     CDS             1..1338
                     /gene="LOC139840739"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687089.1"
                     /db_xref="GeneID:139840739"
                     /translation="MLIWLITAHKCKTPAAIDDIITAEIPSEKDDPEGFRAVTEYMLH
                     GPCGGLHMNAPCIVDRQCSKHFPKPYYAETTIDEDGYANYRRRNNGVRFTKNNTSLDN
                     DSVVPYNRYLLLKYNAHINVEWCNRSRAIKYLFKYLNKGPDRATIVIQENMIPGDDAS
                     GDKVIDVNEIRNYLDCRYLSPCEAVWRLFFFDIHYSKPSVIKLSYHLPNQQSITLHNS
                     QKLHALLRRESIKETMFTQWFELNKEDDFARTLTYAKIPTHYVWNQDAKMWSPRKLRT
                     CIGRIVYSNPASGECYYLRMLLNIVKGPRSFEDLRTVNGVLHPTFKDACFAYGLVNDD
                     KEWTEAISEAKIWATGSQLRELFVTMLLFCNVSKPLQLWESSWEALSDDILRKRRKLF
                     NFPDLILTEAQIKNYCLLELQGLLNRNEKSLDDYPDLPQPNPSILTQMDNRLI"
ORIGIN      
        1 atgctaatat ggttgatcac tgctcacaaa tgcaagacac cggctgccat tgatgacatc
       61 atcacagctg agatcccatc tgaaaaagac gatccggagg ggtttcgggc tgttactgag
      121 tacatgctac acggcccttg cggtggcctc cacatgaacg ctccgtgcat tgttgatagg
      181 caatgttcca agcatttccc caaaccctat tatgcagaaa ccacaattga cgaggacgga
      241 tatgctaact ataggagacg aaacaatggt gtcaggttta ctaaaaacaa cacctcactt
      301 gacaacgact ccgttgtccc ctacaacagg tacctgttac taaaatacaa cgcccatatc
      361 aacgttgagt ggtgtaatcg atctcgggca atcaaatatt tattcaagta tttaaacaag
      421 ggccctgatc gagcaacaat agtcatccaa gaaaatatga ttcccggtga tgatgccagt
      481 ggagacaagg ttattgacgt taacgagata aggaattatt tagattgtcg ttatttatct
      541 ccatgcgagg ctgtttggag gctatttttc tttgacatcc actattctaa accatcagtc
      601 attaagttgt cttatcacct cccaaaccag caatcgataa ctctccataa ctcacaaaag
      661 ctacatgcac ttttacgaag ggaaagtatt aaagaaacga tgttcacaca atggtttgaa
      721 ctaaacaagg aagatgactt tgcacgtaca ctgacttatg caaaaatccc tacacattat
      781 gtatggaatc aagatgctaa aatgtggagc ccgagaaaac ttcgaacctg catcggtcgc
      841 attgtctact caaatcctgc atcgggggaa tgttactacc ttcgtatgtt actaaacata
      901 gttaagggcc cccgctcttt tgaagaccta cgtactgtga acggtgtttt acacccaacg
      961 tttaaagacg cttgctttgc ctatgggtta gtgaatgacg acaaggaatg gactgaggct
     1021 atctcagaag caaaaatatg ggctacgggt tcacagcttc gcgagttatt cgttactatg
     1081 ttactctttt gcaacgtaag taaaccacta caactatggg aatcaagttg ggaggcttta
     1141 tcggacgaca tcttgcgtaa aagaaggaaa ttatttaact ttcctgatct aatcctaacc
     1201 gaggcacaaa ttaaaaatta ttgtttgttg gaattacaag gcttattaaa tagaaatgaa
     1261 aagtccctgg atgattaccc cgacctacca caacccaacc catctattct aacacaaatg
     1321 gacaaccgcc taatttga
//
LOCUS       XM_071830989            1494 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840740), mRNA.
ACCESSION   XM_071830989
VERSION     XM_071830989.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1494
                     /gene="LOC139840740"
                     /note="uncharacterized LOC139840740; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840740"
     CDS             1..1494
                     /gene="LOC139840740"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687090.1"
                     /db_xref="GeneID:139840740"
                     /translation="MADGKTKVAAQVNTNACVLLNELEIGKQCQVKLIICRSWDMHTV
                     YGRYLSTDFIASDEKGNIIQLTTKSNVAHHFIKRLKDGIVYLIHGFDVISNRNEYCIM
                     RDNSLMIKLTGTTFLRKQPTADPTGFTRHPFNCIELEDLEPTLGKFVVDVVGYAVNIG
                     APDPHKTGSNTLDFNLANESGKTIRTTLWGSLGPAFLERQPAAPASYFILLSSVTVKS
                     GYNSMFRPAQPYICLPIDCPCSGVDLPVIVQPSAPGWHLPPPNEGTLRELLDMARKGK
                     KNISDSQILFQLLFRRFRVICDVRDETSKTVMVLFDDTAESVTKSTAKALLAEVDEET
                     CNTVLPNALANLLGTTKVVLLKTASYYDQGPYESFNCIKVYANEPVPAHPDPPAIMET
                     PVPASSASSCVAAQPLSTPKTLKRIIEVPTPAKDLERVNQRKFVVTTDSEDEENAGED
                     STPKKEDIHVPLINDSMPVSTVSLGAMVAVSLGAMVTVGHYEPLIKV"
     misc_feature    88..345
                     /gene="LOC139840740"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(97..102,109..111,154..165,169..171,190..198,
                     202..204,247..249,271..279,322..330)
                     /gene="LOC139840740"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    <109..>603
                     /gene="LOC139840740"
                     /note="replication factor-a protein 1 (rpa1); Region:
                     rpa1; TIGR00617"
                     /db_xref="CDD:273177"
     misc_feature    <871..1122
                     /gene="LOC139840740"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(886..897,901..903,919..927,931..933,1045..1047,
                     1066..1074,1102..1110)
                     /gene="LOC139840740"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggcagatg gtaaaacaaa agttgcagct caggttaaca caaacgcatg cgttctcctg
       61 aatgagttgg aaataggaaa acaatgccag gtgaagctga ttatctgcag aagttgggat
      121 atgcatacgg tttacgggag atatttgagc accgatttta ttgcttcaga tgaaaagggt
      181 aacatcattc agttgactac caaaagcaat gtggcacacc acttcatcaa acggctcaag
      241 gatggtattg tttacttaat acatggcttt gacgtcatct cgaaccgaaa tgagtactgt
      301 atcatgaggg ataacagcct catgatcaaa ctcaccggga caacatttct taggaaacaa
      361 ccaactgctg accccacggg ctttacccgc catcccttca attgtattga actcgaggac
      421 ttggagccca cgttgggcaa attcgttgtt gatgttgttg gttatgctgt taacattgga
      481 gcacccgatc cacataaaac aggctcgaac actctcgatt tcaacctggc taacgagagt
      541 ggtaaaacga tacgcactac gctttgggga agtttggggc ctgcttttct tgaacggcag
      601 cccgcagcac ccgcatcata cttcattctc ttgagttcag ttacagtcaa aagtggttac
      661 aatagtatgt ttcgccctgc ccaaccttat atttgcttac ctatagattg tccttgcagt
      721 ggcgtcgact tacctgtaat tgtgcaacca tctgctccag ggtggcattt gccaccaccc
      781 aatgaaggaa cgcttcgaga gctacttgat atggcgcgca agggcaaaaa gaacatctca
      841 gactcccaaa ttttatttca actacttttc cgcaggttcc gcgttatatg cgatgtgcga
      901 gatgagacat caaaaacagt catggtgctc tttgatgaca ctgccgagtc ggtgacaaaa
      961 agcactgcca aggctctgct agctgaagtt gatgaggaaa catgtaacac tgtacttccg
     1021 aatgcacttg caaacctcct gggcaccaca aaggtggttc tgttgaagac ggcatcgtac
     1081 tatgatcagg gcccgtacga gagcttcaat tgcattaagg tctatgcaaa cgagcctgtt
     1141 ccagcgcatc cggaccctcc agcaatcatg gaaacccccg tacctgcaag ctccgcgtca
     1201 tcctgtgtag ctgctcaacc attgtcgaca cccaaaacac taaagaggat cattgaggtt
     1261 cctacgcctg caaaggattt ggagcgtgtc aatcagcgca agtttgtcgt taccaccgac
     1321 tcggaggatg aagagaatgc tggtgaagat agcacaccta agaaggagga tattcatgta
     1381 ccattaataa atgattcgat gccagtcagc acagtcagct tgggtgcaat ggtagcagtc
     1441 agcttgggtg caatggtaac agtcggccac tatgaaccgc ttattaaggt gtaa
//
LOCUS       XM_071830990             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840741), mRNA.
ACCESSION   XM_071830990
VERSION     XM_071830990.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139840741"
                     /note="uncharacterized LOC139840741; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840741"
     CDS             1..603
                     /gene="LOC139840741"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687091.1"
                     /db_xref="GeneID:139840741"
                     /translation="MNIVQKFTSVAHPQANGLCEVTNRDIVSGIKKRLNEKRTGWVDE
                     LSNVLWAHRKTFMKSTCETPFSLVYGSEAMIPVEILVPTHTVANFDETANNDALCQNL
                     NFATERILMAAIKEANNKQHIAKYYNKKVRALAFDVGEWVLRNNEASRTENVCKLGPN
                     REGPYQIIAINAVGSYKLADIEGRILPNAWHATLLKRYYA"
ORIGIN      
        1 atgaacattg tgcagaaatt tacatcagtt gcgcatccgc aagccaatgg attatgcgaa
       61 gttactaacc gtgatattgt tagcggcatt aaaaagcgct taaatgaaaa acgtactgga
      121 tgggttgatg aactatccaa tgtgctatgg gcacatcgta aaacatttat gaaaagtaca
      181 tgtgaaacac cctttagtct tgtgtatggc tcagaggcaa tgattcccgt agaaatactt
      241 gtgccaacac atacggtagc caattttgat gaaactgcga ataatgatgc tttgtgccaa
      301 aatttgaatt ttgcgacaga acgcatactg atggctgcaa taaaagaagc gaataataag
      361 caacatattg cgaaatatta taacaaaaag gtgcgtgctt tagccttcga tgttggcgag
      421 tgggttttgc gtaacaatga agcaagtcgc acagaaaatg tttgtaaatt gggacccaac
      481 cgggagggtc cctaccaaat aatagcaata aacgcggttg gttcttataa gctcgcagac
      541 attgaaggaa gaatcctccc taatgcatgg catgctacgc tgttaaaaag atattacgca
      601 taa
//
LOCUS       XM_071830991            1677 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840742), mRNA.
ACCESSION   XM_071830991
VERSION     XM_071830991.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1677
                     /gene="LOC139840742"
                     /note="uncharacterized LOC139840742; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840742"
     CDS             1..1677
                     /gene="LOC139840742"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687092.1"
                     /db_xref="GeneID:139840742"
                     /translation="MTTNENSGVATLNLNKPFQFEGIHFKRWKQKMFFLTMKKVNSVL
                     TTEKSNVNEAADQVDEEQAKALKTWEDNNYLCKNYILNGLSNDLYDYYNSDDFDAKKL
                     WEALQKKYDTEEAGAKKYAVSRYLKFSMTDDKSVETQSHELQKIAHEIISEGMSLDKN
                     FQIAVIIDKLPPSWKDFKNTLRHKTKEFSLESLITRLRIKEEARKQDQKEEVLFVSTN
                     NNTSKKSAAFLKPTGKNFKNQNRKSNQTRNIHPWGNHQNWYPQKNQNKNQRPIKNDLE
                     PFLCFNCGKSGHMTRKCRNRSNTPGVNLTEEFPMIAMITEINLVGQSDGWWVDSGASR
                     HVCNDRSTEYDLSIFIDFYKTHGIIHEKTAPYSPEMNGKAERKIRTLIESVIAILLNS
                     GAASHWWGEVLLTVCYVLNRVPKYKSKTSPYEILKNRNPNLSYFRTWGCLAYVRIPDP
                     KCVKLASRAYECVFVGYTINSKAYKFFDLNARVIIESNDADFYEHKFPFKSGNSGGAL
                     TSNTLKIRDNVVDEDLDNEPDLRKSKRVKITKSFGSEFCAYTLEEDPSSI"
     misc_feature    229..621
                     /gene="LOC139840742"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    838..885
                     /gene="LOC139840742"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
     misc_feature    <1015..1161
                     /gene="LOC139840742"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgactacta atgaaaattc tggtgttgct actcttaatc tcaacaagcc gtttcaattt
       61 gagggtattc acttcaagcg atggaaacaa aagatgtttt ttcttaccat gaagaaggtt
      121 aactctgttc ttacaacaga gaaatctaat gttaatgaag ctgctgacca ggtagacgaa
      181 gagcaagcta aggctttgaa aacatgggag gataataatt atctttgcaa aaactacatt
      241 ctcaatgggt tgtcaaatga tctctatgac tactacaact ctgatgactt cgatgctaaa
      301 aaactatggg aggcattgca gaaaaagtat gacactgaag aagcaggagc aaagaaatat
      361 gctgtaagtc gctatctcaa attctccatg actgacgaca agtcagtgga gactcaatcc
      421 catgaacttc agaaaatagc ccatgaaatc atctctgaag gtatgtctct agataaaaat
      481 tttcaaattg ctgttattat tgataaatta cctccttcgt ggaaagattt taaaaatact
      541 ctcaggcaca aaaccaaaga attttcactt gaaagtctga tcacccgcct tcgcattaag
      601 gaggaagccc gtaaacaaga ccagaaagag gaagtgttgt ttgtttctac aaacaacaac
      661 actagcaaaa aatcagctgc ttttctgaaa ccaacaggta aaaacttcaa gaatcagaat
      721 cgtaagtcga accaaacccg caacattcat ccttggggga accaccagaa ttggtatcca
      781 cagaagaacc aaaacaagaa ccaacgacct attaagaatg acttggaacc ttttctttgc
      841 ttcaattgtg gcaaatcggg tcatatgaca cgcaagtgta ggaacaggtc caacactcct
      901 ggtgtcaacc tgactgaaga gtttccaatg atagctatga ttactgagat taaccttgta
      961 ggtcaatcag atgggtggtg ggtagactcg ggtgcttcgc gtcatgtttg caatgatcga
     1021 agcaccgaat atgatttaag tatatttatt gatttttata aaacacatgg gattatacat
     1081 gagaaaacag caccttactc gcctgaaatg aatggtaaag ctgagcgaaa aattagaaca
     1141 ttaatagaat cagttattgc tatcttatta aattctggag ctgcttctca ttggtgggga
     1201 gaagtacttt taactgtatg ttatgttctt aatagagttc ctaagtataa aagtaaaact
     1261 tctccatatg agatcttaaa aaatagaaat cctaatctgt catactttag aacttggggc
     1321 tgtttagcat atgtaagaat acctgaccca aaatgtgtta aactagctag tagagcatat
     1381 gaatgtgtat ttgttggtta cactattaat agcaaggcgt acaaattctt tgacttgaat
     1441 gcacgagtaa taatagagtc taatgatgct gatttctatg aacataaatt tccatttaaa
     1501 tcaggaaata gtgggggtgc tttaactagt aacacactca aaattagaga caatgtagtt
     1561 gatgaagatt tagataatga acctgatctt agaaaaagta aaagagttaa gatcactaaa
     1621 agctttggct ctgaattttg tgcttataca ttagaagaag atccatctag tatctaa
//
LOCUS       XM_071830992             843 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840743), mRNA.
ACCESSION   XM_071830992
VERSION     XM_071830992.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..843
                     /gene="LOC139840743"
                     /note="uncharacterized LOC139840743; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840743"
     CDS             1..843
                     /gene="LOC139840743"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687093.1"
                     /db_xref="GeneID:139840743"
                     /translation="MYEHCFRLLPGAVRAKLVAPNTALSGFSGESVWPIGIIELELEL
                     VDDDNKELVRSTTVEFYFVRSYSKYNAHLGRTTLQKLAVIPSTVHGLVKFPTPLGIAT
                     IRSEKQDASVEAVEQAEKQPSEAEQPRSRMIITNPRHPEQKIKIGGGLSEETKFKLRN
                     ILASNTDFFAWNEADMTGVPREIAKHKLNANPSLTPVRQKKRGVAPERSEWLKAEVDK
                     LVKENILREVRYQTWVANQVLVKKPDGSWRMCVDFTDINKACPKDNYPLPEIDWKVES
                     LAGF"
     misc_feature    670..>837
                     /gene="LOC139840743"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtacgaac attgttttcg cttactgcca ggggctgtgc gagccaagct agtggcccct
       61 aacaccgctt tatcaggatt ttctggggag tccgtatggc caatcgggat cattgaatta
      121 gaactggagc tggtagatga tgataataag gagttagtaa gaagtacaac agtagaattt
      181 tatttcgtaa ggtcttactc aaaatacaat gcgcatttag gacgcacaac tttgcaaaaa
      241 ttggcagtta tcccttccac agtgcatggt cttgtcaaat tcccaacgcc attaggaatt
      301 gcaacgataa ggtcagaaaa acaagatgca agtgtcgagg ctgtggaaca agcagaaaaa
      361 cagccaagtg aggcagaaca gcctcgaagc cgcatgatca ttacaaatcc gcgacatcca
      421 gaacaaaaaa ttaaaatcgg cggagggttg tctgaagaga caaagtttaa gcttcgtaat
      481 atattagctt ctaacacgga tttctttgca tggaacgaag cggacatgac gggcgtgcca
      541 agagaaattg ctaagcataa acttaacgca aatccaagtt tgacaccagt gcgacaaaag
      601 aaacgcggtg tggcaccaga aagaagcgaa tggttgaagg cagaagtcga taagttggtc
      661 aaagaaaaca tattacgaga agtaaggtac caaacgtggg tagcaaacca agtactggta
      721 aaaaagcctg atgggtcttg gcgcatgtgt gttgacttca cggatattaa taaagcctgt
      781 cccaaggaca attatcctct accagaaata gactggaaag ttgagtcgct agctggcttc
      841 tga
//
LOCUS       XM_071830993             495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840744), mRNA.
ACCESSION   XM_071830993
VERSION     XM_071830993.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139840744"
                     /note="uncharacterized LOC139840744; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840744"
     CDS             1..495
                     /gene="LOC139840744"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687094.1"
                     /db_xref="GeneID:139840744"
                     /translation="MHTDGACVLEGAGAGIVLKSPEGEEYTFALRFSFPVTNNEAEYE
                     ALLSGMRVEKYLEVKELSVYVDSQLVANQFNRIFEAHDELMQKYLTLVKELAVDFDLF
                     QITQVSRTLNKKADALSKLAALTFSHFKKENWVEEVKVKSIETDSVNAAVEEEEQSWM
                     TPIV"
     misc_feature    1..369
                     /gene="LOC139840744"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(10..21,109..117,124..126,196..198,316..318,358..360)
                     /gene="LOC139840744"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgcacacag atggggcttg tgttctagaa ggcgcagggg caggaatagt cctaaaaagt
       61 ccagaaggag aagaatatac cttcgcgcta cgatttagct tccccgtcac aaacaatgaa
      121 gctgagtatg aagcattgtt atctggaatg cgggtagaaa aatatctgga ggtaaaagaa
      181 ctgtcagtat atgttgattc gcaattagtt gcaaaccaat tcaacagaat atttgaagca
      241 catgatgaat taatgcaaaa atatctgaca cttgtgaaag agctggcagt ggactttgat
      301 ttattccaga taactcaggt ttcaagaacg ttgaataaaa aggcggatgc gcttagtaag
      361 ttagccgcct taacattcag ccattttaag aaagaaaatt gggttgaaga agttaaggta
      421 aaatccattg agaccgacag tgtaaatgcc gcagttgaag aagaggagca gagttggatg
      481 acaccaatag tataa
//
LOCUS       XM_071830994             534 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            phosphatase 7 long form homolog (LOC139840745), mRNA.
ACCESSION   XM_071830994
VERSION     XM_071830994.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..534
                     /gene="LOC139840745"
                     /note="serine/threonine-protein phosphatase 7 long form
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840745"
     CDS             1..534
                     /gene="LOC139840745"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /protein_id="XP_071687095.1"
                     /db_xref="GeneID:139840745"
                     /translation="MVAAGDAYLPLPDWRNNDNVARCSDFMGLPINGDVVSGTWHNMT
                     PAEWADSVGHYLGIDQQRVRVYMLAAMSDILFPDGNSTSAPLNYVFNLINFEHLSWGS
                     AVLAHVYRNLCRTAENTDQSGINGAMLLVQQWLYVRIPSLAPNLRHDIDFTSNTPLNG
                     PYVCLASIWTDYAPTTR"
     misc_feature    <178..>495
                     /gene="LOC139840745"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 atggtggcag ccggagacgc ataccttcca cttcctgatt ggagaaacaa cgataacgtt
       61 gcaagatgtt cagattttat gggtttaccc ataaatggag atgttgtgtc tggtacatgg
      121 cacaacatga cgccagcgga atgggctgat tccgttggcc actatttagg gattgatcaa
      181 caacgggtta gagtttatat gttagctgcc atgtctgaca ttctattccc tgacggtaat
      241 tccaccagtg ctccattaaa ttatgtgttt aacctcatca actttgaaca tttgagttgg
      301 ggtagtgcgg tgcttgcaca tgtatataga aatttgtgcc gtacagctga aaatacagac
      361 caatcaggca ttaatggtgc gatgctttta gtacaacaat ggttgtatgt aagaattcct
      421 agtcttgcgc caaatcttcg tcacgatata gactttacat ccaatactcc gttgaatgga
      481 ccgtatgttt gtttggcttc catatggacc gattatgcac cgactactcg ctga
//
LOCUS       XM_071830995            1062 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840746), mRNA.
ACCESSION   XM_071830995
VERSION     XM_071830995.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1062
                     /gene="LOC139840746"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840746"
     CDS             1..1062
                     /gene="LOC139840746"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687096.1"
                     /db_xref="GeneID:139840746"
                     /translation="MASNKLHGLGIKGLKNFVFTLGFSHSRCDHSLFIYKNGHEIAYI
                     LLYIDDIIITASSDSLRQFFMRKLANEFAMKDLGELSYFLSISVHRTSQGLFLSQSKY
                     AREIIDRADMSSCKPSHTPVESKSKLSSSVGAPYHDPTFYRSLASALQYLTFTRPGIS
                     YAVQQICLHMHDPHEAHMAVLKQNCVIYKVRYILVFIYPSAIRNTWFHIPMLIGPVVP
                     IPCDLRQVIFGDNLISWSSKRQPTLSHIVSESCWMRNLLLELHCPIDKATLVYCENVS
                     VIFLSSNPVQHQRTKHIELDIHFVREKVARGQVRVLHVPSRYRKADIFTKGLPRLLFE
                     DFLVSLNVRDSPVSTAEVY"
     misc_feature    <40..369
                     /gene="LOC139840746"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    676..990
                     /gene="LOC139840746"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggcctcaa acaagctcca cgggcttggt atcaaaggtt tgaaaaattt tgttttcaca
       61 cttggattct ctcatagtcg ttgtgaccat tctttgttta tatataaaaa tggtcatgaa
      121 attgcataca tacttctgta catagacgac atcatcatta cagcatcatc tgattcttta
      181 cgacaatttt ttatgcgcaa gttggccaac gaatttgcga tgaaagatct tggcgaactc
      241 agttactttc ttagtatttc tgtgcatcgt acatctcagg gactattctt aagtcagtct
      301 aaatacgctc gcgagataat tgatcgtgca gatatgtctt catgtaaacc atcacacacg
      361 cctgttgaat ccaagtcgaa acttagttct tcagtcggtg ctccatatca tgatcccact
      421 ttttatagaa gtctcgcaag cgcacttcaa tatcttactt ttactaggcc aggtatttca
      481 tacgcggtac aacaaatttg tctccatatg catgatccac atgaggctca catggctgtt
      541 cttaaacaaa attgcgttat atacaaggta cgatacattt tggtcttcat ttatccaagt
      601 gcaatacgca acacctggtt tcatataccg atgctgattg ggccggttgt cccgatacca
      661 tgcgatctac gtcaggttat ttttggggat aaccttatat catggtcttc taaacggcaa
      721 cccactctct cgcacattgt ctccgagtct tgctggatgc gtaacctttt gctagaacta
      781 cattgcccta ttgacaaagc gaccttggta tattgtgaaa atgtaagcgt gatttttctg
      841 tcaagtaatc cagttcaaca tcaacgtaca aaacacatag aattagatat acattttgta
      901 cgtgaaaaag tggctcgtgg acaagttagg gttctacatg ttccatctcg ttatcgaaaa
      961 gctgatatct ttaccaaagg gctacctcgt ttattatttg aagattttct ggtcagtctc
     1021 aatgttcgcg attctcccgt ttcgactgcg gaggtgtatt ag
//
LOCUS       XM_071830996             387 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840747), mRNA.
ACCESSION   XM_071830996
VERSION     XM_071830996.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..387
                     /gene="LOC139840747"
                     /note="uncharacterized LOC139840747; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840747"
     CDS             1..387
                     /gene="LOC139840747"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687097.1"
                     /db_xref="GeneID:139840747"
                     /translation="MIHIKHELQHYELDVPNHPELKNVQTAAELCRGLRETEKTEIYP
                     LLDRLIRLILTLPVSTATSERAFSSMKIVITRLRCSMSDDFLKNCLLLYIERDIVETL
                     SIDEIIDDFATKKRRRVRLQMSKVTQ"
     misc_feature    <163..294
                     /gene="LOC139840747"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atgatccaca taaaacacga gttgcaacat tatgagctag atgtgcctaa tcatccagag
       61 ttaaaaaatg ttcaaactgc tgctgagtta tgtagaggcc tacgagaaac tgagaagaca
      121 gaaatatatc ctttgcttga tagattgatt cgtcttatat taactcttcc agtttcaaca
      181 gccacaagtg aaagagcttt ttcatcaatg aaaattgtta taacaaggct tcgttgcagc
      241 atgagtgacg attttcttaa aaattgcttg cttctttaca ttgagagaga cattgttgaa
      301 acactttcaa tagatgagat aatagatgat tttgctacca agaaacgtag acgtgttcga
      361 ctccaaatgt caaaggttac tcaatga
//
LOCUS       XM_071830997             948 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840748), mRNA.
ACCESSION   XM_071830997
VERSION     XM_071830997.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..948
                     /gene="LOC139840748"
                     /note="uncharacterized LOC139840748; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840748"
     CDS             1..948
                     /gene="LOC139840748"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687098.1"
                     /db_xref="GeneID:139840748"
                     /translation="MIHSYRLNGKKIWGAPVLSDVSIGWRKLLTIRDTIRPYVIYQVG
                     DGNSVSAWHDNWSDYGPIEISHRDIHSCGLDHNCTVRELINKCDGKCPPEWLSRYPGL
                     NNIQMPILVPRPDALKWRDWDGNLTDFSVCGVWNSIRDRSPKVPWFPVVWFTHCIPRH
                     SFMLWLAMGENLKTQDKLRQWEMTHGDPLVCSLCEVEPDSHNHLFFSCPFSAKVWDVM
                     RSHIEYDITGSCWKDFLVAILPTATRNSAKCIVAKLLFSAAIYFIWQERNCRFFRSGK
                     RNHEKVVKVIMSTVRLKLLSIKWKDTDQAKHMKDKWKIP"
     misc_feature    385..642
                     /gene="LOC139840748"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgatccact cgtatcggtt gaatggtaaa aaaatttggg gggctcctgt attgtctgat
       61 gtaagtattg ggtggagaaa gttattaact attcgggata cgatacgtcc atatgttatt
      121 taccaagttg gtgatgggaa ttcagtgtct gcttggcatg ataattggtc agattatggg
      181 cctattgaga tttctcatcg tgatattcat tcttgtgggc ttgatcacaa ctgcactgtt
      241 cgtgagttaa ttaataagtg tgatgggaaa tgtcctcctg aatggttgtc tcgttaccca
      301 ggtttaaata atatccagat gcccattctt gtgcctcgtc cagatgctct caaatggcga
      361 gattgggatg gcaacttgac tgatttttct gtttgtggag tgtggaattc tattcgtgat
      421 agatcgccca aggtgccatg gttcccggtt gtgtggttta cccattgtat tcctagacac
      481 tcatttatgt tgtggttagc tatgggcgaa aatttaaaaa ctcaagacaa gcttcgtcaa
      541 tgggagatga ctcatggtga tccgttggtt tgctctcttt gcgaggtgga acctgattct
      601 cataatcatt tatttttctc ttgtccattc tcggctaagg tgtgggatgt gatgagaagc
      661 catatcgaat atgatattac aggttcttgc tggaaagact ttttggttgc tatattacca
      721 actgctacaa gaaattcagc gaaatgtatc gtagcgaaat tgttattttc agcggctatt
      781 tacttcattt ggcaagagcg gaattgtaga tttttcagaa gtggaaaacg gaatcatgaa
      841 aaggtggtta aagtgattat gtcgactgtg aggttgaagc ttctatcgat caagtggaag
      901 gacaccgatc aagcaaagca tatgaaagac aagtggaaga tcccataa
//
LOCUS       XM_071830998            1056 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840749), mRNA.
ACCESSION   XM_071830998
VERSION     XM_071830998.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1056
                     /gene="LOC139840749"
                     /note="uncharacterized LOC139840749; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840749"
     CDS             1..1056
                     /gene="LOC139840749"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687099.1"
                     /db_xref="GeneID:139840749"
                     /translation="MGLDLHPTLQYLHSTYSYNHGVTDLQLWQHILIKNSTGVQTQAC
                     ILSSIAHKLALLHTILVTWISFKAVGGIQFLFWHHNWIGGYKLCDKFHRLYALESDKL
                     CKLSDRLSINGWCWSWRRNIRSGAEAQQFSELSSTIDHVTLNDSSDKWVCTSFPKDTF
                     SVSGFRRLFSRDVIGNCPTHWCKFIPPNINFFLWRARLNRLPDKCNLLERGVQSINLL
                     CSSCSINVEDTTNIFFECEIAMQVWSYMSSWLDITLHVWHSMDGLMQWIMTVFQSRSK
                     TITLEAICYGTLWTLWRYRNGRIFDPNKFKKCHIIDSIVLSSFDWLSARYKKVRLNWN
                     DWLMNWNDWLMNPLNSL"
     misc_feature    <541..726
                     /gene="LOC139840749"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggattgg atttgcaccc aacacttcag tacttacata gtacttacag ttacaatcat
       61 ggggttacag acttacagtt atggcaacat attcttatta aaaactcaac aggagtacaa
      121 actcaggcct gcattttgag tagcatagcc cataaactcg cactattaca tacaattctt
      181 gttacttgga tttcgtttaa agccgttgga gggatccaat tcttattttg gcatcataac
      241 tggattggag gctataagtt atgcgataaa tttcatcggc tttatgctct tgaatctgat
      301 aagctgtgca aattatctga ccgcctttct attaatggat ggtgttggag ttggaggagg
      361 aacattagat ccggagcaga agctcaacaa ttctccgagt taagttcaac aatcgatcat
      421 gtcactctta acgattcgag tgacaaatgg gtgtgcacaa gttttcctaa agatactttt
      481 tctgttagcg gttttcgtag actcttcagt cgagatgtta ttggtaattg tccgactcat
      541 tggtgtaagt ttatccctcc caatataaat ttctttttgt ggcgtgctcg gttaaacagg
      601 ttgccggaca agtgtaatct tttggagagg ggtgttcagt ctattaactt actgtgttct
      661 tcatgctcaa taaatgtgga agacactact aacatttttt ttgaatgtga gattgcgatg
      721 caagtatgga gttatatgtc atcttggtta gatattactc ttcatgtttg gcattctatg
      781 gatggtttaa tgcaatggat tatgacagtt tttcaatcgc gttcgaagac aattacttta
      841 gaagccattt gttacggtac tctttggact ctttggcgtt accgaaacgg aagaatcttc
      901 gatcccaaca agttcaagaa atgtcacatt attgattcga ttgtattatc ctcttttgac
      961 tggctttcgg ctcgttataa gaaagtcagg cttaattgga atgactggtt aatgaattgg
     1021 aatgactggt taatgaatcc gttgaactcc ttgtaa
//
LOCUS       XM_071830999            1519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DEAD-box ATP-dependent RNA
            helicase 10-like (LOC139840750), mRNA.
ACCESSION   XM_071830999
VERSION     XM_071830999.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1519
                     /gene="LOC139840750"
                     /note="DEAD-box ATP-dependent RNA helicase 10-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 14 Proteins"
                     /db_xref="GeneID:139840750"
     CDS             1..1350
                     /gene="LOC139840750"
                     /codon_start=1
                     /product="DEAD-box ATP-dependent RNA helicase 10-like"
                     /protein_id="XP_071687100.1"
                     /db_xref="GeneID:139840750"
                     /translation="MEEEEVVVEEEEAENEEEEEVQSFKELGIVDQLIEACDSLGWKL
                     PTKIQADAIPLALQGKDLIGVAQTGSGKTGAFALPIIQSLLDAPQAFFALVLSPTREL
                     AIQIAEQFEALGSSIGVKSAVLVGGVDQLQQSIQLGKRPHIVVATPGRLVDHLSNTKG
                     FSLRTIKYLVLDEADRLLNVDFEKSLDEILNAIPRERRTYLFSATMTKKVKKLQRACL
                     RNPVKIEADSKYSTVITLNQKYRFVPAKHKDCYLVYILNEKSETTSMVFTRTCEATRH
                     LSLMLRNLNFRAIPISGQMTQAKRLGALNKFKAGECNILICTDVASRGLDIPSVELVI
                     NYDIPTNSKDYFHRVGRTARAGRTGVAISLINQYELEWYLQIEKLIGYKLPEYPAQEE
                     EVLFFLERVTEAKRLTAMKIKEGGGHKRRRGGEDDEEVEKFHGKNNKRSSNNKSKRR"
     misc_feature    67..1347
                     /gene="LOC139840750"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; Region: SrmB; COG0513"
                     /db_xref="CDD:440279"
     polyA_site      1519
                     /gene="LOC139840750"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggaagaag aagaagtagt agtagaagaa gaagaagcag aaaatgaaga agaagaagag
       61 gtgcaatctt ttaaagagtt aggtatcgtt gaccaattga ttgaagcttg tgatagtttg
      121 ggctggaaac tacctactaa aattcaagct gatgctattc ctcttgcact tcaagggaaa
      181 gatttaattg gagtagcgca aacgggttcg ggtaaaaccg gagcttttgc attgccaata
      241 atacaatcat tattggatgc tccacaggca ttctttgctc tagtgctttc tccgacgagg
      301 gaacttgcaa ttcagattgc tgaacaattt gaggctttgg gatcaagcat tggtgtaaag
      361 tctgcagtgc ttgttggagg ggttgaccaa ctgcaacaaa gcattcaact tggaaagcga
      421 ccacatattg tcgttgccac gcctggacgt ctcgtggatc atttatcaaa tactaaaggc
      481 ttttctcttc gtaccatcaa gtacttggtg ttggatgagg cagataggtt actaaatgtc
      541 gattttgaga aatccctcga tgagatcctt aatgccattc cccgtgagag aagaacatac
      601 ttgttttctg ctactatgac caaaaaggtg aaaaaactac agagggcttg tctaaggaat
      661 cctgtaaaga ttgaagctga ctccaaatat tccactgtta ttaccttgaa tcaaaagtat
      721 cgttttgttc ctgctaagca taaggattgt tatctagtat atatcttgaa tgaaaaatct
      781 gaaactacat cgatggtttt cacccgtaca tgtgaagcaa cccgccatct atctcttatg
      841 ctacggaacc ttaactttcg ggcaataccg atttctggac aaatgactca ggcaaaaaga
      901 ctgggagcgc tgaacaagtt caaggctgga gagtgtaata ttcttatttg tactgatgta
      961 gctagcagag ggctcgatat tccatctgtt gagttggtta taaattatga tatacctaca
     1021 aactcaaagg attattttca tcgagtggga agaactgcac gtgcggggcg gactggggtt
     1081 gcaatctctt taataaatca gtatgaactc gagtggtatc tccaaataga gaaacttatt
     1141 ggttataagc tgccagagta tccagcccaa gaagaggaag ttctgttctt cttggaacgt
     1201 gtgaccgagg ccaaacgttt aactgcgatg aaaataaagg aagggggagg tcataagaga
     1261 aggagaggtg gtgaagatga cgaggaagtt gagaagtttc atggaaaaaa caacaagagg
     1321 tcatcaaata acaagtcaaa acgacgatag atcgagcatt tgataattgc agtcagatat
     1381 atgaatggat aatgtaaaac agaattgaac cttagcttcg caaattctcg tcgtctggtt
     1441 tcattatttc tgaaagtttt ggattttatg ttttggtacc ttattaatat tactaaagca
     1501 acttaaaatt gaatgttta
//
LOCUS       XM_071831000            1776 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATPase family AAA
            domain-containing protein At1g05910-like (LOC139840751), mRNA.
ACCESSION   XM_071831000
VERSION     XM_071831000.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1776
                     /gene="LOC139840751"
                     /note="ATPase family AAA domain-containing protein
                     At1g05910-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139840751"
     CDS             1..1776
                     /gene="LOC139840751"
                     /codon_start=1
                     /product="ATPase family AAA domain-containing protein
                     At1g05910-like"
                     /protein_id="XP_071687101.1"
                     /db_xref="GeneID:139840751"
                     /translation="MRVMINYFSLFVLFMYLYRLSVSFSLANLASGVQTAGPSSKGGA
                     DIQPLQVDGSVSFDDIGGLSGYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCRTPG
                     TGKTVIARALACVASKAGQKISFYMRKGADVLSKWVGEAERQLKMLFEEAQKNQPSII
                     FFDEIDGLAPIRSIKHEQIHNSIVSTLLALMDGLDSRGQVVLVGSSVGFSRGTFLMYY
                     DRYQIDKPVMEDRSTFFDRLIEAVLSIPSEGASKKSQKASTIHELGKAPKIDTGPKIS
                     ELKAKAEAEGHSLYRLRMCLRDVCNRVLYDKRFSAFHYPVLDEDAPNYHAVIQSPMDM
                     STLLQRVDSGKYITCKVYLEDFDLILANTKIYNRDDYNGARIVRCYISRAHELRDSVH
                     GMLSQMDPALVASCEMIAENGGLLTLPEDISVSCFQNVPVVQAATTTRAIARLRHAQP
                     EVNLDQSYEALKRPKKSADPSHTASTADEGSQQPQEPTVDDQNDANPTTSPPDCDEVA
                     STANEVSESKSQDVTILDVESDGKIESAKKLLLERTSDYGVPQLERLYTRIVKGVFEL
                     KNEQDNFKPLVFDFLLKFAENKANF"
     misc_feature    175..618
                     /gene="LOC139840751"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    order(310..318,379..381,385..390,487..492)
                     /gene="LOC139840751"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:410865"
     misc_feature    865..1209
                     /gene="LOC139840751"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; Region:
                     Bromodomain; cl02556"
                     /db_xref="CDD:445827"
     misc_feature    order(946..948,961..963,970..972,1087..1089,1099..1101,
                     1129..1131)
                     /gene="LOC139840751"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99957"
ORIGIN      
        1 atgagagtta tgattaacta ttttagctta tttgttctgt ttatgtattt gtacagactt
       61 tcagtatcat tctctttggc taacttagct tctggtgttc aaaccgcagg gcccagttcc
      121 aagggagggg ctgacattca gccattacag gttgatggga gtgttagttt tgatgatata
      181 ggcgggcttt caggatatat tgatgcacta aaagaaatgg tcttttttcc tttactctat
      241 cctgactttt ttgccagtta ccatattacc cctccaagag gagtgttgct atgtaggacc
      301 cctggcactg ggaaaacagt cattgcacga gcattagctt gtgtggcctc aaaggcaggg
      361 cagaaaataa gtttctatat gaggaaaggt gctgatgtgc ttagcaaatg ggtaggtgag
      421 gctgaaagac aactgaagat gctttttgaa gaagcacaaa agaatcagcc atcgataata
      481 tttttcgatg aaatagatgg ccttgctcct attaggtcaa tcaaacacga acagattcat
      541 aactcaattg tttcaactct gcttgcttta atggacggtc ttgattcacg gggacaagtg
      601 gttttagttg gttcatcggt tggctttagc aggggcacat tcttgatgta ctatgatcgt
      661 tatcagattg acaaacctgt aatggaggat agaagtacct ttttcgaccg tttgattgaa
      721 gctgtgttgt caataccttc agagggagcc tcaaaaaagt cccaaaaagc atctactatt
      781 catgaactcg gtaaggcacc aaaaatagac actggtccta agatctctga actgaaagct
      841 aaagctgaag ctgaaggtca ttctttgtat agattgagaa tgtgtctacg tgatgtttgc
      901 aaccgggttt tatatgataa gcgtttcagt gcgtttcatt accccgtgtt agatgaagat
      961 gctccaaact atcatgcagt tatacagagc cctatggata tgtctaccct tctgcaacgt
     1021 gttgatagtg gaaaatacat aacatgcaaa gtgtacttag aagattttga tctcatttta
     1081 gcaaacacaa agatatataa tagggatgat tacaacggag ctaggattgt caggtgttac
     1141 atcagtaggg ctcatgaact tcgagattca gtacatggga tgctatcgca aatggacccc
     1201 gcattggttg cttcctgtga gatgattgct gaaaatggtg gtctgttgac tcttccagaa
     1261 gatatttctg tttcttgttt ccagaatgtt cctgttgttc aggcggcaac tacgactagg
     1321 gctatcgcac gtcttcgtca tgctcaacca gaagttaatt tagatcagag ctatgaagct
     1381 ctgaagcggc ccaaaaagag tgctgatcct tcacatacag cttcaactgc cgatgaaggg
     1441 tctcagcagc ctcaagaacc aacagtcgat gatcaaaatg acgcaaaccc tacaacctcg
     1501 cctcctgatt gcgatgaggt ggctagtaca gccaatgagg ttagtgagtc caaatctcaa
     1561 gatgtaacca ttctagatgt ggagagtgac ggtaaaattg agtctgctaa gaagctttta
     1621 ctggagcgca catctgatta tggagtgcca cagctggaaa gactgtatac tcgaatcgtt
     1681 aaaggtgttt ttgagttgaa aaacgaacag gacaatttca agcctctagt ttttgacttt
     1741 ttgttgaagt ttgctgaaaa caaggctaat ttttga
//
LOCUS       XM_071831001             600 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-responsive
            transcription factor 1B-like (LOC139840752), mRNA.
ACCESSION   XM_071831001
VERSION     XM_071831001.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..600
                     /gene="LOC139840752"
                     /note="ethylene-responsive transcription factor 1B-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 25 Proteins"
                     /db_xref="GeneID:139840752"
     CDS             1..600
                     /gene="LOC139840752"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     1B-like"
                     /protein_id="XP_071687102.1"
                     /db_xref="GeneID:139840752"
                     /translation="MNSSTFNCSPESSTGSSPEFSNWDTNSLPFNENDSEEMLLFGLL
                     TTGFEDTCPEEVTSKKPSKIASYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDSAEE
                     AALAYDQAALAMRGSSAILNFPVDKVRESLHEIMGGKHAVEGGCSPVLVLKKKHSMRM
                     RDENKKIRKEKKFENVVVFEDLGVDYLEQLLSYSIENKC"
     misc_feature    196..390
                     /gene="LOC139840752"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(202..207,211..213,217..219,223..225,229..231,
                     241..243,247..249,271..273,277..279,286..288)
                     /gene="LOC139840752"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
ORIGIN      
        1 atgaattcct ctactttcaa ctgctcacct gaatcctcaa ctggttcttc accagaattc
       61 tcgaattggg acacaaattc ccttcctttt aatgaaaacg attccgaaga aatgcttctt
      121 ttcggtcttc taacaaccgg ctttgaagac acgtgtccag aagaagttac ctcaaaaaaa
      181 ccaagcaaaa tcgcgtcata tagaggtgtt agacgacgtc catggggaaa gtttgcagcc
      241 gagattagag attcaacgcg aaacggtgtg agagtatgga taggtacatt tgatagtgca
      301 gaagaagctg cattagctta tgatcaagct gctttggcaa tgagaggttc atctgcgata
      361 ttgaattttc cggtcgataa agtgagggaa tcgttacatg agattatggg cggcaaacac
      421 gcggtggaag gcggttgttc tccggtgttg gtgttgaaaa agaagcattc aatgagaatg
      481 agagatgaaa ataagaagat tagaaaagaa aaaaagtttg aaaatgtggt ggtttttgaa
      541 gatttagggg ttgattattt ggaacaattg ttgagttatt ctatagaaaa caagtgttaa
//
LOCUS       XM_071831002            1002 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides VAMP-like protein YKT61
            (LOC139840753), mRNA.
ACCESSION   XM_071831002
VERSION     XM_071831002.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1002
                     /gene="LOC139840753"
                     /note="VAMP-like protein YKT61; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840753"
     CDS             112..714
                     /gene="LOC139840753"
                     /codon_start=1
                     /product="VAMP-like protein YKT61"
                     /protein_id="XP_071687103.1"
                     /db_xref="GeneID:139840753"
                     /translation="MKITALLVLKCNPDGSSNPTILANATDVSHFGYFQRSSVKEFII
                     FVGRTVAKRTPPSQRQSVQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVLDE
                     YQKNFGDSWKGVQADSSQPWPYLDEALTRFQDPAQADKLLKIQRELDETKIILHKTID
                     SVLERGEKLDSLVEKSSDLSMASQMFYKQAKKTNQCCTIL"
     misc_feature    112..708
                     /gene="LOC139840753"
                     /note="Synaptobrevin/VAMP-like protein [Intracellular
                     trafficking and secretion]; Region: SNC1; COG5143"
                     /db_xref="CDD:227472"
ORIGIN      
        1 agtcaaaggt atttctacaa cgccgtagtt gcttccttct acaccagaat aatcaatcaa
       61 tcaaatcaaa tacgtattta agttgcatat tcccccaatt caataaaaaa gatgaagatc
      121 acagctttac ttgttcttaa atgcaatcca gacggatcat ctaatcccac aattctagca
      181 aacgccaccg acgtcagcca tttcggttac tttcagagat ctagcgttaa ggaattcatt
      241 atttttgttg gccgtacagt cgctaaacgt acacctccat ctcaacgtca atccgttcaa
      301 cacgaagaat acaaggtgca ctcctacaat agaaatggtc tatgtgcttt gggctttatg
      361 gatgatcatt accctgttcg aagtgcgttt tctttgttaa accaagtgtt agatgaatat
      421 cagaagaact ttggtgattc gtggaaaggg gtgcaagcag attcaagtca gccatggcct
      481 tacttagatg aagctttgac cagatttcag gatccagccc aggcggataa gctgctgaaa
      541 attcagaggg agttggatga aactaaaata atactccaca agactatcga tagcgtcctt
      601 gaaagaggtg aaaagctgga cagtttagtt gagaaaagtt cagacctcag tatggcttct
      661 cagatgttct acaaacaggc gaagaaaacg aaccaatgct gtacgatatt gtaaaagaaa
      721 attggctgca aaatttgatt aagttgtgtt ggtttgtcgt ttataatgtt acaaggtttt
      781 ttcttatgga ttttctctcg tgttcatttt taggattgag taaagggatt gatatttgat
      841 gtgatatatg tttgatactg tttgtgatat acggagtact aaatatatat atgttggatc
      901 caactaggat cataaacaac ctgctaatta gacaaatacg tcattgtatg tttagcatcg
      961 tgttttcttt ggaatctcgt acacttggcg gctgttgttt ct
//
LOCUS       XM_071831003             878 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            bHLH104-like (LOC139840754), mRNA.
ACCESSION   XM_071831003
VERSION     XM_071831003.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..878
                     /gene="LOC139840754"
                     /note="transcription factor bHLH104-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139840754"
     CDS             1..666
                     /gene="LOC139840754"
                     /codon_start=1
                     /product="transcription factor bHLH104-like"
                     /protein_id="XP_071687104.1"
                     /db_xref="GeneID:139840754"
                     /translation="MDPFENTNWIDYDTLMNNVPSTDFYWGDHSGTIQVDASLASLAQ
                     VEECAVKECSKKRVRSTSCNRAENKACRERQRREKLNERFLELSSTLDPDRPANTDKL
                     AELGDAVRVLNQLKSESEESKEMNEKLLEEIKTLKAEKNELREEKLVLKAEKAKMEQQ
                     VKSMTNSVSPPGFMTPHSAAYQAGASKMPVFPGYGYVPMWHYLPESTIDTSHDHELRP
                     PAA"
     misc_feature    205..432
                     /gene="LOC139840754"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein IAA-leucine resistant 3
                     (ILR3) and similar proteins; Region: bHLH_AtILR3_like;
                     cd11446"
                     /db_xref="CDD:381452"
     misc_feature    order(205..210,217..222,226..231,241..243,298..303)
                     /gene="LOC139840754"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:381452"
     misc_feature    order(235..240,247..249,256..261,268..270,301..306,
                     313..318,325..327,334..336,343..348,355..357,364..369,
                     373..378,385..387,394..399,406..408,415..420)
                     /gene="LOC139840754"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:381452"
ORIGIN      
        1 atggatcctt tcgagaatac taattggatc gactacgaca cattaatgaa taatgttcca
       61 tccacagatt tttattgggg tgatcacagt gggacaatac aagtagatgc ttcacttgct
      121 agccttgcac aagtggagga gtgtgctgtg aaggaatgtt cgaaaaagag ggtgcgtagt
      181 acttcatgca acagggccga aaataaagca tgtcgtgaga ggcaaagaag ggaaaagctg
      241 aatgagagat tcttggaatt gagctctact ttggatcctg accggcctgc caacactgat
      301 aaattggctg aacttggaga tgctgtccga gttctgaatc agctgaaatc tgaatctgaa
      361 gaatcaaaag agatgaatga gaaattattg gaagagatca aaacgttgaa ggctgagaag
      421 aatgaactcc gtgaagagaa actagtttta aaggccgaaa aagcaaaaat ggagcagcag
      481 gtcaaatcga tgaccaatag tgtttcacca cctgggttta tgacaccgca ttcagctgca
      541 tatcaggctg gagcgagtaa gatgcccgtt tttccaggct atggttacgt tccaatgtgg
      601 cattatttac ctgaatcaac aattgacaca tctcatgatc atgagctgag gccacctgct
      661 gcttagatgc tgaaaaggac ttctaatgac aaatttgtta gtctcattgt aatttgtaca
      721 tacaagtgct caattgcgtt ttcatttttc tgtactttcg gtatttcatt tttggaggcg
      781 attagagttg attgtaggag gaatttgttg aatagaaata ataattgttc tccaataatc
      841 tagaaaagcc cctttctttg taataattgt gaccattt
//
LOCUS       XM_071831004            3237 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA repair protein
            RAD5B-like (LOC139840758), mRNA.
ACCESSION   XM_071831004
VERSION     XM_071831004.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3237
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3237
                     /gene="LOC139840758"
                     /note="DNA repair protein RAD5B-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139840758"
     CDS             1..3135
                     /gene="LOC139840758"
                     /codon_start=1
                     /product="DNA repair protein RAD5B-like"
                     /protein_id="XP_071687105.1"
                     /db_xref="GeneID:139840758"
                     /translation="MEAPIYTQDNPIDLTLSPPPKPPKMSVNSPEIPVIRTVTSTGGT
                     RVSTTHAIKQEVKEETGTDCSKTLNPKMSFSEYLESTNTRVLSKHDPEYTDYIKKEAV
                     DESEPVYDAEPISVSVKPVNSVKSINPVKPVKSTGCGVSVKKENQKVVGVVENGDFEE
                     EADWLLVGRTMITGLSTTKGRKLEDNEIVHFAFPDSDLRSNKGGYWISTKASSGIVRF
                     STKRSGEIGRLPMEWSKCLIPLVKSKKVKVLGRCVAAPVNLSLMEEIMLYISFYIHHS
                     ILTDDGKATWKLDSSSNIDSTIYPLLTLFKLLKKDPFQKAEFTPEDLDSRKRGLALES
                     DANEAVSALPVGKRRKGETMLLEPNKDAQVINESSLNKLVGAADMYNLKEMEPPMTLT
                     CDLRPYQKQALHWMTESEKGVDVEKAEETLHPCWAAYRICDERSTAIYVNIFSGEATT
                     KFPKATQTARGGILADAMGLGKTVMTISLILARPGKGITDTEDLKREYDEKVVTRRPR
                     GGTLIVCPMALLSQWKDELETHSTPNSLSVFVHYGGDRSNDPKVIAEPTVVLTTYGVL
                     SASYKSHGENSIFQKVDWHRVVLDEAHTIKASKSQCAQAAFALSAYCRWCLTGTPLQN
                     NLEDLYSLLCFLHVEPWCNWAWWNKLIQRPYENGDHRGLKLVKAILRPLMLRRTKDTK
                     DKEGRPILVLPPTDIQVTECEQSEAEHDFYDALFKRSKVQFDQFVAQGKVLHNYANIL
                     ELLLRLRQCCNHPFLVMSRGDSQQFSDLNKLARRFLDNNLDSSAPNPSKAYIEEVVDG
                     LRKGENTECPICLESADDPVLTPCAHMMCRECLLSSWRNPAYGLCPICRQNLRKTDLI
                     SCPTDSKFRVDVEKNWKESSKVSKLLECLESTRKKGNGEKSIVFSQWTSFLDLVEIPL
                     KRRNIGFLRFDGSLSQKNREKTLREFNETTDKMVLLMSLKAGGVGLNLTAASNVFLMD
                     PWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKDTVEERMQQVQARKQRMIAGALTDEE
                     VRSARLEELKMLFR"
     misc_feature    514..810
                     /gene="LOC139840758"
                     /note="HIRAN domain; Region: HIRAN; pfam08797"
                     /db_xref="CDD:400928"
     misc_feature    <946..3078
                     /gene="LOC139840758"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     Region: HepA; COG0553"
                     /db_xref="CDD:440319"
     misc_feature    2404..2565
                     /gene="LOC139840758"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(2419..2421,2428..2430,2464..2466,2470..2472,
                     2479..2481,2488..2490,2527..2529,2536..2538)
                     /gene="LOC139840758"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438111"
ORIGIN      
        1 atggaggcac cgatttatac acaggacaat ccaatcgacc ttactctttc accacctcca
       61 aaacccccaa aaatgtcggt caattcgcct gaaattcccg tcatccgcac agttacaagc
      121 accggtggga cccgagtttc gaccacacac gcgatcaaac aagaagtaaa agaagaaaca
      181 ggtacggatt gttcaaaaac tctaaatcct aaaatgtcat tttcggagta tctagaatca
      241 acaaatacta gggttttatc caaacatgac ccggagtata ctgattatat taaaaaagaa
      301 gctgtcgatg aatctgaacc tgtttacgat gccgaaccga tctccgtctc tgttaaaccg
      361 gttaactcgg ttaagtcgat taacccggtt aaaccagtga aatcgaccgg ttgtggagtg
      421 agtgtaaaga aagagaatca aaaggttgtt ggagttgttg aaaatggtga ttttgaagag
      481 gaagctgatt ggttgttagt tggaaggact atgattactg ggctttcgac aacgaaaggg
      541 cgaaaattag aagataatga aattgttcat tttgcatttc ctgatagtga tttgagaagt
      601 aataaaggtg ggtattggat tagtactaaa gcttcttctg ggattgttag gttttctact
      661 aaaagatccg gagagattgg taggcttcca atggaatggt caaagtgttt aattccgctt
      721 gttaaatcga aaaaggtgaa ggtacttggt agatgtgtgg ctgcacctgt gaatttaagt
      781 ttgatggaag agataatgct ttatataagt ttttatattc atcattcaat acttactgat
      841 gatgggaaag ctacttggaa gcttgattct tcatcgaata ttgactccac aatttatcca
      901 cttttgactt tgtttaagct gctgaaaaag gatccatttc aaaaagctga attcacacca
      961 gaggatcttg attctcgtaa acgtggccta gctcttgaaa gtgatgcaaa tgaagctgta
     1021 tcagcactac ctgtaggaaa gcggcgaaag ggtgaaacaa tgcttttaga acccaacaaa
     1081 gatgctcaag ttattaatga atcatcatta aacaagcttg ttggtgctgc tgatatgtac
     1141 aacttaaagg aaatggagcc tccaatgaca cttacatgtg atttaagacc ataccaaaaa
     1201 caggctcttc actggatgac agaatcagaa aaaggtgtag atgttgagaa agctgaagaa
     1261 acactccatc catgttgggc agcatatcgt atatgcgatg aaaggtcaac tgcaatttat
     1321 gtaaatatat tctctggaga agcaactacc aaattcccta aagcaacaca gacggctaga
     1381 ggaggaattt tagcagatgc aatgggacta ggtaaaactg tgatgaccat ttctttgatc
     1441 cttgcaagac caggcaaagg aattaccgat accgaagatt taaagagaga atatgacgaa
     1501 aaagttgtta ctcgtagacc aagaggtgga acactcattg tttgtcctat ggctttgctg
     1561 agtcaatgga aggatgagct tgaaacacat tctacaccga acagtttatc tgtttttgtt
     1621 cattatggtg gggataggag taatgacccg aaagtgatcg ctgaacctac tgttgtcttg
     1681 acaacttatg gtgttctctc tgcatcctat aaaagtcatg gagaaaatag tatctttcaa
     1741 aaagtagatt ggcatagagt ggtgttagat gaagcacata caattaaggc ttcaaaaagc
     1801 cagtgtgctc aagctgcctt tgcattgtct gcatactgcc gctggtgtct tactggtaca
     1861 cctcttcaga acaatttgga agacctgtac agtcttctat gtttcttgca tgttgagcca
     1921 tggtgcaact gggcctggtg gaacaagcta atccaaaggc cttatgagaa tggtgatcac
     1981 agagggctaa agcttgttaa agccatatta aggccactca tgttgaggag aacaaaagat
     2041 acaaaagata aagaaggaag gccaatactt gttcttccac caactgacat ccaagttact
     2101 gaatgtgaac aatcagaagc tgaacatgat ttctacgatg ctcttttcaa gagatccaaa
     2161 gtccaattcg atcagtttgt agcacaaggc aaagttcttc acaactatgc taatatcctt
     2221 gaactcctac ttagattaag acagtgttgc aatcacccgt ttcttgttat gagccgaggc
     2281 gattcacaac agttttcgga tctaaacaaa ctggcaagaa gatttcttga taataatctt
     2341 gattcatctg ccccgaatcc cagtaaagct tatatagaag aagttgttga tggattacga
     2401 aaaggtgaaa acactgagtg tcctatatgt ctcgagtctg cagatgatcc cgtgcttaca
     2461 ccgtgtgctc atatgatgtg tagagagtgt cttttatcga gttggagaaa cccggcgtac
     2521 ggtttatgcc cgatttgtag gcaaaattta agaaaaactg atcttatttc gtgcccgact
     2581 gacagtaagt ttcgagttga tgttgagaag aactggaaag aatcttcgaa ggtttcgaag
     2641 cttctagaat gtttggaaag tacaaggaaa aaagggaatg gagagaaaag tattgttttt
     2701 agtcagtgga cttcattttt ggatcttgtt gagattccat taaagaggag aaatattggt
     2761 tttttgagat ttgatggaag tttgtctcag aaaaatagag agaagacttt gagggaattc
     2821 aatgaaacta ctgataaaat ggtgctgtta atgtctttaa aagccggtgg agttggtctg
     2881 aacttgactg cagcttctaa tgtttttctc atggatccat ggtggaatcc tgcagtagag
     2941 gagcaggcga taatgaggat tcaccgtatc ggtcaaaagc gaactgtctg tgttagaaga
     3001 ttcattgtga aggatactgt tgaggaacgt atgcaacaag ttcaggcaag gaagcaacgg
     3061 atgattgctg gagctcttac cgatgaggaa gtccgatctg ctcgacttga agaacttaag
     3121 atgctcttta gatagatgat tttaagtcct taaaatgttt tttgaaatgt ttttttaagt
     3181 ccttgatgac atggtttatg ccttttggag tctagtattg tgtattcttt ttttgtt
//
LOCUS       XM_071831006            1227 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calmodulin calcium-dependent
            NAD kinase-like (LOC139840759), mRNA.
ACCESSION   XM_071831006
VERSION     XM_071831006.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1227
                     /gene="LOC139840759"
                     /note="calmodulin calcium-dependent NAD kinase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139840759"
     CDS             1..1095
                     /gene="LOC139840759"
                     /codon_start=1
                     /product="calmodulin calcium-dependent NAD kinase-like"
                     /protein_id="XP_071687107.1"
                     /db_xref="GeneID:139840759"
                     /translation="MYNANVIVCKFRKQRFDRVTKDLKVTRAFSTMVEEMKVIGGTPK
                     KGDGNDTLTEVMGPVAHCDRSPVLLFMGGGMGAGKSTVLKEILKEAFWSEAAASAVVV
                     EADAFKETDVIYRALSSKGHHNDMLQTAELVHQTSTDAASSLLVTALNDGRDVIMDGT
                     LAWEPFVQQTIAMARSVHKHRYRMGVGYKVLEDGTINENYWEKVEDEEDEFVVKKPYR
                     IELVGVVCDPFLAVTRGIRRAIAVKRAVRVNSQLKSHKRFANAFPRYCHLVDNAKLYC
                     TNGIGIPPKLIGWKDGNNNLLVDRDEIKCLESLSEINDEADSIYELYADPKMLTDSDS
                     VWNKLVLTPTRTDLQRDLKIVIEKIEKSKL"
     misc_feature    187..>486
                     /gene="LOC139840759"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atgtataatg caaatgtgat tgtatgtaaa tttagaaagc aaagatttga tagagtcaca
       61 aaggatttaa aagtgacacg agcattttca acaatggtgg aagaaatgaa ggtgatcggt
      121 ggcaccccga aaaaaggcga tggcaatgac accttgacgg aggtgatggg cccggtcgct
      181 cattgcgaca gaagccccgt cctcctattc atgggcggtg gaatgggtgc aggaaagagt
      241 accgttctta aagaaatcct taaagaagca ttttggtcag aggcagccgc aagtgctgtg
      301 gtggtagagg ccgatgcttt caaggagaca gatgtaattt accgggcgct tagctcaaaa
      361 ggtcaccaca atgacatgct tcaaaccgct gaactggtgc atcaaacatc tactgatgct
      421 gcttcgtctt tattggtaac ggctttaaat gatggaagag atgtgatcat ggatgggaca
      481 ttagcttggg aaccatttgt gcaacaaaca attgccatgg caagaagtgt tcataaacat
      541 cgttatcgta tgggagttgg ctacaaggtc ttagaagacg gtaccattaa cgagaattac
      601 tgggaaaaag tcgaagacga ggaagatgag tttgtagtca agaaacctta tagaattgag
      661 ttggttggtg ttgtttgtga tccttttctt gcagttacca ggggaattag gagggcaata
      721 gcagtgaaaa gagcagtgag ggtaaattca caactgaaat cacacaagag atttgctaat
      781 gcatttccaa ggtattgtca tcttgtggac aatgcaaagc tctattgcac caatggcata
      841 gggattcctc caaagttgat cgggtggaaa gacggcaata ataatctatt agtcgatcga
      901 gatgagatca aatgtttgga atcactaagt gaaatcaacg acgaagcaga ttctatatac
      961 gaactttatg cagaccccaa gatgttaacg gattctgatt cggtttggaa caaacttgta
     1021 ttgacaccta cacgaaccga tcttcaacgt gatttgaaaa ttgtgattga gaaaattgaa
     1081 aagtcaaaat tataacttgt gttcccaaag tcgatcaaat ttaattgtat ttttcacaat
     1141 aacgacttgt gtgttgtttt gtgaattggt tttcatcgtt aatctttacg tggtgcttat
     1201 gttctgggac gcaagtcatg taatgat
//
LOCUS       XM_071831007             855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840760), mRNA.
ACCESSION   XM_071831007
VERSION     XM_071831007.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..855
                     /gene="LOC139840760"
                     /note="uncharacterized LOC139840760; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840760"
     CDS             1..855
                     /gene="LOC139840760"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687108.1"
                     /db_xref="GeneID:139840760"
                     /translation="MASNDAILAVREQGNVPLQCLKLTESNYTSWSIMVETALKAYGL
                     WEVVDHVTGGTVEARKNHTTKGIIFQTLPEDILLQVAKHNDAKDVWEAIKTRYLGADR
                     VQKARLQTLRSELEMLKMKENESMNDFSGKISGIVAKFKSLGSNLEEEVVVRKLLNSS
                     PKKYLPIIASIEQYSDLEKMSFEEAVGRVKAYEERLKSHDERGDGQLLYASGEHDGKQ
                     GGRGRGRGRGLGRGERGRGRGSGQGDKSGLRCYECGSFGHFARECTKWKDKELEANLI
                     QEEEPALL"
     misc_feature    67..144
                     /gene="LOC139840760"
                     /note="Domain of unknown function (DUF4219); Region:
                     DUF4219; pfam13961"
                     /db_xref="CDD:433608"
     misc_feature    193..597
                     /gene="LOC139840760"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    745..795
                     /gene="LOC139840760"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
ORIGIN      
        1 atggcaagta acgacgcaat tctagcagtc cgtgagcaag gaaacgtacc actccaatgt
       61 ctaaaattaa ccgaatcgaa ctatacttca tggtcgatta tggttgagac ggcgttgaaa
      121 gcatacggtt tatgggaagt ggtggatcac gtaacaggag gaacggtgga agcaagaaag
      181 aaccacacca cgaaaggcat tatcttccaa actctaccgg aagatatttt gttgcaagtt
      241 gctaagcaca acgacgcaaa agatgtttgg gaagcaatta agacacgtta tttaggagcc
      301 gatcgagtcc aaaaggcgcg tctacaaact cttaggagtg aattggagat gctaaagatg
      361 aaggagaacg agagtatgaa tgacttttcg ggcaagataa gtggcatagt tgcaaaattt
      421 aaaagtctcg gttcaaatct ggaagaagaa gtggttgtga gaaaacttct aaattcatcc
      481 ccgaaaaagt atctaccaat tattgcctct atcgagcaat attcggatct tgaaaagatg
      541 tcctttgaag aagctgttgg aagagtaaaa gcgtatgaag aaagactcaa aagccatgac
      601 gaaagaggtg atggacaact tttgtatgca agtggggagc atgatggtaa gcaaggtgga
      661 cgaggaagag gtcgtggaag aggattgggt agaggagaaa gaggacgtgg aagaggctcg
      721 ggtcaaggtg acaagagcgg tttgaggtgc tacgagtgtg ggtcttttgg acactttgca
      781 agggagtgta caaaatggaa ggataaggag ctcgaagcaa atttgattca agaggaagaa
      841 ccggcacttc tttga
//
LOCUS       XM_071831008             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840761), mRNA.
ACCESSION   XM_071831008
VERSION     XM_071831008.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139840761"
                     /note="uncharacterized LOC139840761; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840761"
     CDS             1..660
                     /gene="LOC139840761"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687109.1"
                     /db_xref="GeneID:139840761"
                     /translation="MWFDKWCSIGPIEQIVSRRDRYDFRLKDDMVVAEYRQLYGDSWP
                     DEWRRKYPVLDQIKVPELKNNHDAMWNRLNIQERLLIWNPGASYNCHLCDIEVDSVQH
                     LFFKCDYSKQVWGKLKEKLLFRGLSNELHVIMEMMAIYPYKKQIWSILTRLVIDASVY
                     FVWQERNKRCFQGVKRNSEELITIVQDYIKVKLLTLKVKDSKAVREVEQKWGVNLMKR
                     M"
     misc_feature    <202..339
                     /gene="LOC139840761"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtggtttg ataagtggtg ttcaattggt cctattgagc agattgtttc aagaagggac
       61 aggtatgact ttaggctcaa agatgatatg gtggtggctg agtataggca gttatatggt
      121 gacagttggc ctgatgagtg gagaagaaaa taccctgtgc ttgatcaaat taaggttcct
      181 gaattaaaga ataatcatga tgctatgtgg aacaggctta atattcagga aagattattg
      241 atatggaatc ctggagcaag ctataactgt catctatgtg atatagaagt ggattctgtg
      301 cagcacttgt tcttcaagtg tgattactct aagcaagtgt ggggtaaatt gaaggaaaag
      361 ctactgtttc gtggtctgtc aaatgaactt catgtaataa tggagatgat ggctatttat
      421 ccttataaga aacaaatatg gagtattttg acaagactag tgattgatgc tagtgtgtat
      481 tttgtgtggc aagaaagaaa taaaagatgt tttcaagggg ttaaaaggaa ttctgaagag
      541 ttgattacta ttgtccagga ttatataaag gtcaagttgt tgaccttaaa agtcaaagat
      601 tcaaaagctg ttagggaagt ggagcagaaa tggggtgtga atcttatgaa aaggatgtaa
//
LOCUS       XM_071831009            1775 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein GAMETE EXPRESSED
            1-like (LOC139840762), mRNA.
ACCESSION   XM_071831009
VERSION     XM_071831009.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1775
                     /gene="LOC139840762"
                     /note="protein GAMETE EXPRESSED 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139840762"
     CDS             1..1770
                     /gene="LOC139840762"
                     /codon_start=1
                     /product="protein GAMETE EXPRESSED 1-like"
                     /protein_id="XP_071687110.1"
                     /db_xref="GeneID:139840762"
                     /translation="MGHPKHFILNILWVLLLLSQSIESFSWFFSTGKVNSNEKLSEFS
                     ENIVAEFSMESIDSKKGVTLIEKAKRKAALANTCWQNAYQNLFAGCSEILAGEEQRSR
                     LAWHLSDCFQKETGRSPFPYCDVKSRMVDCHKRLDQEAHRIYLEFYLETNTICHQLQT
                     DAFKRQTERLVNELKRSAESAEDKLENIEEKADNLLRSSDNIHEFLSSIDVQTQQVAQ
                     TSKNVEERVCVVLEHSQSVYEQSVKIADSQLELRDRQIKMNEKMNEGMKMLNESANKL
                     GEEIDSLSNEAVEIGKEIVKVGDAMFMKMDTLQNKANDIGNVSEISLNRQKQLLESQA
                     DALEVLKTVTSFQSQALQESRGTLKQLIELGQSQQQELIHRQEQLKQVHDHLVDNSKT
                     ILAAQEVFESKQANMFVAIDKLFTLHNAILLESRIMKAFLVYSILIFTLYMFTSTKQT
                     YNVRPRLYIGLCVTFLIEFVVLRYGSDIEQQSWIINIIRSTFVTLASCQLLYTIYSYR
                     DYETLNHQMLQSLIEKVNGMQGNKQLLCDDYDSDVDWSTWVDADITEDELDDLNYILP
                     EDIKEASITTSISRDYNLRYRHQ"
     misc_feature    <466..>1215
                     /gene="LOC139840762"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 atgggtcatc ctaaacattt cattctcaat atcctatggg ttcttttgtt gctttcacaa
       61 agcatcgagt cctttagctg gttcttttcg actggaaaag ttaattctaa cgaaaagctg
      121 tcagaatttt ccgaaaatat cgttgctgaa ttctctatgg aatccattga tagcaagaag
      181 ggagtgacgt tgatcgaaaa agcaaaacga aaggcagctt tggctaatac ttgttggcaa
      241 aacgcatatc aaaatttatt tgcaggttgc tcagagattc tagcaggtga agaacaacgg
      301 tctagattgg cttggcattt aagtgattgt tttcagaagg aaaccgggag gtctccgttt
      361 ccgtattgcg acgtaaaatc tcgtatggtt gattgtcata aacggttaga tcaggaggct
      421 cataggattt atctcgagtt ttatctcgag accaatacta tctgccatca attacagact
      481 gatgcgttca agagacaaac ggaacgattg gtaaatgaac ttaaacggtc tgctgaatct
      541 gcagaggaca aattagagaa catagaagaa aaagcagaca atttattgcg cagttcagat
      601 aatattcatg aatttttatc gtctatcgat gttcaaacgc aacaagtggc tcaaacatca
      661 aaaaatgttg aagaacgtgt gtgtgttgta ttagagcatt cacaatcggt ttatgaacag
      721 tctgttaaaa tagcagattc tcaattagaa ctgcgtgaca gacagataaa aatgaatgaa
      781 aaaatgaatg aaggaatgaa aatgcttaat gaatctgcca ataaattggg tgaagaaatc
      841 gatagtttaa gtaacgaggc tgttgaaata ggaaaagaga tcgttaaagt tggagatgct
      901 atgtttatga aaatggatac tttacaaaac aaagctaatg atattggtaa cgtatcggaa
      961 atatcgttaa acaggcaaaa acaactactt gaaagccagg ctgatgcact tgaagttctt
     1021 aagactgtaa caagttttca gtcccaagca ctccaagaaa gcaggggaac tttgaagcag
     1081 ttgattgagc ttggtcaaag tcaacaacag gaactcatac ataggcaaga acaacttaaa
     1141 caagttcatg atcatctagt cgacaattcg aaaaccatat tagctgctca ggaagttttt
     1201 gagtcaaaac aagcaaacat gtttgttgcc atcgacaagc tcttcactct gcacaacgca
     1261 atattactcg aatcgcgaat aatgaaagct tttcttgtat actctatatt aatcttcact
     1321 ctatacatgt ttacaagcac aaagcaaacc tacaatgtcc gacccagact atacatcggg
     1381 ttatgtgtaa catttttgat tgaatttgtg gtccttcgtt atggaagtga cattgaacaa
     1441 caatcgtgga ttatcaacat cattaggtca acatttgtga ctcttgcttc atgtcaactt
     1501 ttgtatacca tttactctta cagggactat gagacattga atcatcagat gctacaatct
     1561 cttattgaga aggttaacgg catgcaagga aataaacagc ttttatgcga cgattatgat
     1621 agtgatgttg actggtcaac atgggttgat gctgatataa ctgaagatga gttggatgat
     1681 cttaactata ttctccctga agatatcaaa gaggcttcaa tcactacttc aatttcaaga
     1741 gactataatc ttcgttaccg ccaccaataa acaaa
//
LOCUS       XM_071831010            3039 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840764), mRNA.
ACCESSION   XM_071831010
VERSION     XM_071831010.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3039
                     /gene="LOC139840764"
                     /note="uncharacterized LOC139840764; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139840764"
     CDS             1..3039
                     /gene="LOC139840764"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687111.1"
                     /db_xref="GeneID:139840764"
                     /translation="MKAKMNTFLTTCMPTIFILLPIVFASTSQNNELTSLVSIKSSLI
                     DSLNYLNDWNISISSSHCNWTGVSCNANGFIDKLDLSNMNLTGNISQDIQNFHHLSFL
                     NISSNKFDSILPTSFANLTSLVTIDVSQNNFIGEFPFGFGKSANFLKTINGSSNNFEG
                     LLPEYLANVTSLETIDFSGSFFVGTIPKSYKNLKNLKFLGLSGNNLTGPIPPEIGQLL
                     SLEVIIIGYNEFEGSIPAEIGNLANLQYLDLAVGSLSGPIPKELGKLKNLTTVYIYQN
                     SFEGNIPSEIGNLSSLVYLDLSDNQFSGEIPEEIGDLKSLKLLNLMCNKLEGSIPSTI
                     GELPKLEVLELWKNSLNGSLPVNLGMNSPLQWLDVSSNSLSGEIPAGLCDSGNLTKLI
                     LFNNSFSGSLPIGLSTCSSLIRVRVQNNFISGMIPGGFGNLPELQRLELAHNNLSGKI
                     PHDLTLSNSLSFIDVSYNHLVSSLPYNILAMPNLQTLIVSNNYLDGEIPNQFQDFPFL
                     SVLDLSSNNISGMIPETIASCQKLVNLNLSRNELTGEIPKTVARMTMLSVLDLSNNSF
                     VGRIPESFGSSLALETVNFAYNKLEGPVPNNGMLMTINANDLAGNDGLCGGVLKPCPQ
                     TRNGNLTRRRLRNRHVFYGFLFGVCVILIAGMAVLAGRWLYRRWFQYGFFDGWFMKSS
                     TEWPWRLIAFQRLHFTSADIMESIKESNVIGMGGSGIVYKATTRNSSQPPVAVKKLWR
                     SEPDFENGDDLFMEVNLLGRLRHRNIVRLLGYLHNETDVMMVYEYMPNGNLGEALHGK
                     QSAKMLVDWVSRYNVAVGVAHGLAYLHHDCHPPVIHRDIKSNNILLDADLEARITDFG
                     LARTMVRKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKQPLDAS
                     FGESVDIVEWVRNKMNKREMDGVLDLEIGGDCKFVQEEMLLVLRIALLCTNKLPKERP
                     SMRDVITMLSEAKPRRKSVCDDIGAKEKPNFNNSPVIGLL"
     misc_feature    31..2976
                     /gene="LOC139840764"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    229..294
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    295..366
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    367..585
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    514..558
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    586..657
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    658..729
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    730..801
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    802..873
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    874..945
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    946..1017
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1021..1086
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1090..1161
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1162..1233
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1234..1305
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1306..1377
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1378..1449
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1450..1521
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1522..1593
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1594..1665
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1666..1737
                     /gene="LOC139840764"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 atgaaagcta aaatgaacac tttcttaacc acttgcatgc ctactatttt cattcttcta
       61 ccaatagtct ttgcaagtac ttcacaaaat aatgaactta catcacttgt atctatcaaa
      121 tcatccttga ttgattcatt aaattactta aatgattgga acatatcaat atcttcatca
      181 cattgcaatt ggactggtgt ttcatgcaat gcaaatggct tcattgataa acttgatctt
      241 tcaaacatga atctaacagg aaacatttca caagacattc aaaacttcca tcacctttct
      301 ttcctaaaca tatcgtccaa taagttcgat tcgatcctcc caacttcatt cgctaatctc
      361 acatcactcg ttacaatcga cgtaagccaa aacaacttca ttggtgaatt cccatttggg
      421 tttggaaaaa gtgcaaactt tttaaaaacc atcaatggat ctagcaataa ttttgaaggg
      481 ttactacctg agtatctagc gaacgtaacg tcgttagaaa ctatcgattt tagtggtagt
      541 ttttttgtgg gaacaattcc gaaaagttac aaaaacttga aaaacttgaa gtttcttgga
      601 ctctcaggga acaatctcac gggaccaatc ccgccagaaa tcggtcagct tttgtcgtta
      661 gaagttatca taattggtta taacgaattc gaaggttcga tcccagcaga aattggtaat
      721 cttgcaaatt tacagtatct tgatttggca gttggatcac tttcaggtcc aattccaaaa
      781 gaattgggta agcttaaaaa ccttaccaca gtttacattt atcagaacag ttttgaaggg
      841 aatattccta gcgaaattgg gaatctttca tcgttggttt atcttgatct atcggataac
      901 cagttttccg gtgagatccc ggaagaaatt ggtgatttaa aaagcttaaa gttgttgaat
      961 ttaatgtgta ataagcttga aggctctatt ccaagtacaa ttggtgagtt accaaagtta
     1021 gaagtacttg aattatggaa gaattcattg aatggttcgt taccggtgaa tcttggaatg
     1081 aattctccgt tacaatggtt agatgtttct tcgaattcat tatccggtga gattccggct
     1141 ggattgtgtg attcaggcaa tcttactaaa ctcattcttt tcaacaattc gttttcgggg
     1201 tctctaccaa ttgggctttc gacttgttct tcgttgattc gagttcgtgt tcagaataac
     1261 ttcatttcgg gtatgattcc tggtgggttt ggtaatttac cggagctaca acgtttagaa
     1321 ttggcgcata acaatttaag cggtaaaatt cctcatgatc ttacattgtc gaattcgctt
     1381 tcgtttattg atgtttcgta caatcatctt gtttcgagtt taccttataa catattggca
     1441 atgccgaatc ttcaaacgtt aattgtttca aacaactatt tagatgggga aatcccgaac
     1501 cagtttcagg atttcccctt tttatctgtg cttgatttat caagcaacaa tatctccggg
     1561 atgatcccag agaccatagc ttcgtgtcag aagctagtaa atttaaatct aagtcgcaat
     1621 gaattgaccg gagagatccc gaaaacggta gcacgtatga cgatgctatc tgttttggat
     1681 ctctccaata attcattcgt cggaaggatt cccgaaagtt tcggaagctc gctcgcttta
     1741 gaaacggtga actttgcata caataagctc gaaggacctg tcccgaataa cggaatgtta
     1801 atgacgataa acgcaaacga tctagctggt aacgacgggc tttgtggagg cgtactcaag
     1861 ccttgtccac aaactcgaaa tggtaattta acacgaagga gacttcgaaa tcgacatgtg
     1921 ttttacgggt tcctttttgg ggtttgtgtg attttaatcg ctggaatggc ggttttagcc
     1981 ggaagatggc tttaccggag atggttccag tacggtttct tcgatggatg gttcatgaag
     2041 agtagcactg aatggccatg gagattaata gcatttcaaa gacttcattt cacaagtgca
     2101 gatattatgg agagcattaa ggaatcaaat gtgattggaa tgggaggaag tgggattgtt
     2161 tacaaagcca caacccgtaa ctcgtcccaa cccccggttg cggtcaagaa actgtggcgg
     2221 tctgagcccg attttgaaaa cggggatgat ttgtttatgg aagtaaatct tttgggccgg
     2281 ttaaggcacc gaaacattgt gagattatta gggtaccttc ataacgaaac ggatgttatg
     2341 atggtttacg agtatatgcc taatgggaac ttaggagaag cgttacacgg gaagcaatcg
     2401 gccaaaatgt tggttgattg ggtctcgagg tacaatgttg cggttggtgt tgctcatggg
     2461 ctggcttatc ttcatcatga ttgtcacccg cctgttattc atcgtgatat taaatcgaat
     2521 aatatcctgc tcgatgctga tctcgaagca aggattacag atttcggatt ggcgaggaca
     2581 atggttagaa agaatgaaac tgtctcaatg gttgctggat catatggata cattgcccct
     2641 gaatacggtt atacattgaa ggttgatgag aaaagtgaca tatatagttt cggggtggtt
     2701 ctcttagagt tgttaacagg gaaacaaccg ttggatgcat catttggcga gtcagttgat
     2761 attgtcgaat gggttcgaaa taagatgaac aaaagagaaa tggatggtgt attagattta
     2821 gaaataggag gggattgcaa atttgtgcaa gaagagatgc ttttagtgct aagaattgca
     2881 cttttatgca caaacaagct accaaaagaa aggccttcaa tgagggatgt aatcacaatg
     2941 cttagtgagg caaaaccaag aaggaaaagt gtttgtgatg atattggtgc taaagagaag
     3001 cccaatttca ataactcacc tgttataggc cttttgtag
//
LOCUS       XM_071831011             480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840765), mRNA.
ACCESSION   XM_071831011
VERSION     XM_071831011.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..480
                     /gene="LOC139840765"
                     /note="uncharacterized LOC139840765; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840765"
     CDS             1..480
                     /gene="LOC139840765"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687112.1"
                     /db_xref="GeneID:139840765"
                     /translation="MSDVPYQINGVHYSRGYYLADGIYPTWAAFVKGFSSAVDEKRTY
                     FTKKQASARKDVERTFEILQGRWHILQQPARAYEVNIMRQLMYTCIAIHNIIIEDNGY
                     NLAENDWVVEPVQHIQRTWIDRCDARARRTRELRDREVHEGIRSDLVEHLWDLRDDL"
     misc_feature    <10..303
                     /gene="LOC139840765"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtctgacg ttccttatca aataaacggg gttcattata gcagggggta ttatttagct
       61 gacggtattt acccaacttg ggcggcattt gttaagggat tttcaagtgc cgttgacgaa
      121 aaacgtactt actttacaaa gaaacaagcg agcgctcgca aagatgttga aagaacgttt
      181 gagatcctac aaggccgttg gcatattctt cagcaacccg cacgagctta cgaagtgaat
      241 ataatgagac aactaatgta cacgtgcatc gcgatacaca acatcattat cgaagacaat
      301 ggatacaacc ttgctgagaa tgattgggta gttgagcccg tccaacatat acaacgtacg
      361 tggatcgata ggtgtgacgc tcgtgcaaga agaacaaggg agttacgtga tagagaagtg
      421 catgaaggca tacgatctga tttggttgaa catttgtggg atcttcgtga cgacttatga
//
LOCUS       XM_071831012             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840766), mRNA.
ACCESSION   XM_071831012
VERSION     XM_071831012.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139840766"
                     /note="uncharacterized LOC139840766; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840766"
     CDS             1..447
                     /gene="LOC139840766"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687113.1"
                     /db_xref="GeneID:139840766"
                     /translation="MNDILSYSANPLPYYFRWFHRRQDTRGKWSISPHLKMTAALRQL
                     AYSYTPDALDEYLQMSERVARESLHNFCRCIIDLYDNVYLREPTLHDIHCLYEGHERI
                     HGFSGMLGSIDCMHWAWAKCPVAWRGQYMRGDHSHPTIMLEAVGLV"
     misc_feature    247..>435
                     /gene="LOC139840766"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgaatgata ttctaagcta ctcagcaaat ccattgccgt attattttag atggtttcat
       61 cgaagacaag atacacgtgg taagtggagt attagcccac atttgaagat gacagccgcg
      121 ctacgtcagc tagcatacag ttatacaccg gatgcgttgg atgagtatct tcaaatgtct
      181 gaacgagttg ctcgggaatc tctacacaac ttttgtaggt gtatcattga tttgtatgat
      241 aacgtgtacc taagagagcc tactttgcac gacattcact gtttgtatga aggtcatgaa
      301 aggattcatg gtttttcggg catgttgggt agtatagatt gtatgcactg ggcatgggca
      361 aaatgtccag ttgcgtggag aggacagtat atgcgaggtg atcacagtca cccaactatt
      421 atgcttgaag cggtcggtct cgtatga
//
LOCUS       XM_071831014            1254 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840767), mRNA.
ACCESSION   XM_071831014
VERSION     XM_071831014.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1254
                     /gene="LOC139840767"
                     /note="uncharacterized LOC139840767; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840767"
     CDS             1..1254
                     /gene="LOC139840767"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687115.1"
                     /db_xref="GeneID:139840767"
                     /translation="MVKVVSQPTLNEVWKHYAFDSIQMESSGRSRGLLSMWRLDFFSL
                     VQAWPRKHWIATILRYIPNDQVVLIVNVYAPHNEQRKKFIWSQLAIMANNWPGPLCFL
                     GDFNSMCLPEERVREVIDLNSIASFNAFISQANIIDQSLSNDEFTREGALGKFSRIDR
                     VFINAKWAMLWPDAILQTDQPDRSDHKSLIWAKNLLYWGHRPFRAAFVINKKLRLLKV
                     DLKVWSSSNQDQDVIKFNEIEGMQINGSWVDDLNLVKEHVVSFFEKLFDFLPSISTVI
                     DLDWASLGLAQVSVSLCSVLERQFSIEEVGSVIKDFDGNKTPGPDGFSLQFFKKGWHF
                     LEDNVMDMFNQFHESPSFPKGFNSSFIVLIAKSNAARSVEQMRPISLINAPYKILTKT
                     LANSKQFDGLYVSGQEFGLMRPHEV"
     misc_feature    <187..579
                     /gene="LOC139840767"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(217..219,316..318,556..558)
                     /gene="LOC139840767"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    1075..>1185
                     /gene="LOC139840767"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggtgaagg tagtttcaca acctacttta aatgaggttt ggaagcatta tgctttcgac
       61 tcaatccaaa tggagtctag tggtcgttcg agaggtctcc tttctatgtg gaggctagat
      121 ttcttttcac tagtccaagc ttggccccga aaacattgga ttgcaacaat tttaaggtac
      181 atccctaacg atcaagttgt acttattgtc aatgtctatg cacctcacaa tgaacaaaga
      241 aagaaattca tttggtcaca attagctatt atggctaaca attggccggg tcctttatgt
      301 tttttgggtg attttaattc gatgtgtctt ccggaagaaa gagtacggga ggttattgat
      361 cttaatagta tagcctcttt taatgctttt attagtcaag ctaatatcat cgatcaaagt
      421 ttatctaatg atgagttcac aagggaaggt gctttaggta aattctctag aattgataga
      481 gtgtttatca atgctaaatg ggcgatgtta tggcctgatg caatcttgca aaccgatcaa
      541 ccggaccgtt ccgatcataa atctttgatt tgggctaaga atttgttata ttggggccat
      601 aggccttttc gggctgcttt tgtgatcaat aagaaactga gattattaaa ggtggatctt
      661 aaagtatgga gctcttcgaa tcaagaccag gatgttatta aattcaatga aatcgaaggt
      721 atgcaaatca atggctcttg ggttgatgat ctgaatttgg ttaaagagca tgttgtttcg
      781 ttttttgaga agttattcga ttttctgccc tctatatcta ctgttatcga tttggattgg
      841 gcctctcttg gcctggccca ggtgtcagtt tctttgtgtt ctgtccttga aaggcagttt
      901 agtattgaag aggttgggtc ggtaataaaa gacttcgatg gtaacaagac cccgggcccg
      961 gatggttttt cgttacaatt ttttaagaag gggtggcatt ttttggaaga caatgtaatg
     1021 gatatgttca accaattcca tgaatctcct tcctttccaa aaggttttaa ttcatcgttc
     1081 attgtgttga ttgcaaagtc taatgccgca agatccgttg agcaaatgcg tcctattagt
     1141 ttaattaatg ctccttacaa gatattgact aaaactcttg ctaatagtaa gcagttcgat
     1201 ggactttatg tttctggcca ggagtttggc ctcatgcgac cgcatgaggt ttaa
//
LOCUS       XM_071831015             342 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840768), mRNA.
ACCESSION   XM_071831015
VERSION     XM_071831015.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..342
                     /gene="LOC139840768"
                     /note="uncharacterized LOC139840768; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840768"
     CDS             1..342
                     /gene="LOC139840768"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687116.1"
                     /db_xref="GeneID:139840768"
                     /translation="MYTDPRRRPVNFEVGDRVYLKVSPWKGVIGFGKRGKLAPRYIGP
                     FKIIQRVNDQTAVLELPTEKCKVDDETQLVPLSDLRVDLNQRLVEEPIRIVDRKVTKL
                     GKKEIHMVLVE"
ORIGIN      
        1 atgtataccg atccacgtag gcgtccggta aactttgaag tgggagatcg tgtttacttg
       61 aaagtttcac cgtggaaggg tgttatcgga tttggtaagc ggggaaagtt agccccgaga
      121 tacattgggc cgttcaagat tattcagaga gttaatgatc aaacggctgt attagagctc
      181 ccgacagaga agtgtaaagt tgatgatgag acgcaactgg ttccgttaag tgatttgagg
      241 gtggacttga atcaaaggtt agttgaagaa ccgataagaa ttgtcgatag aaaggtgact
      301 aagctgggaa agaaggagat ccacatggtg cttgttgagt ga
//
LOCUS       XM_071831016             348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides S-protein homolog 29-like
            (LOC139840769), mRNA.
ACCESSION   XM_071831016
VERSION     XM_071831016.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..348
                     /gene="LOC139840769"
                     /note="S-protein homolog 29-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840769"
     CDS             1..348
                     /gene="LOC139840769"
                     /codon_start=1
                     /product="S-protein homolog 29-like"
                     /protein_id="XP_071687117.1"
                     /db_xref="GeneID:139840769"
                     /translation="MEVLDKDIEKLIGHIYSKDNDLGNQTFTGNVGYRWKFRRNIDET
                     TLFKGHFFWIDNVGVPARQAVIDLFDNKVAAECGQSLLHDHKCFWLVAKDGFYFAKNS
                     PDNWEFKYPWPGL"
     misc_feature    40..291
                     /gene="LOC139840769"
                     /note="Plant self-incompatibility protein S1; Region:
                     Self-incomp_S1; pfam05938"
                     /db_xref="CDD:461784"
ORIGIN      
        1 atggaagtcc tcgataaaga tatcgaaaag ctaattggtc atatatattc aaaagacaac
       61 gatttgggaa atcaaacatt tacaggcaac gtgggatatc gttggaaatt tcgcaggaat
      121 atcgatgaaa caactttgtt taaggggcac tttttttgga tagataatgt tggtgttcct
      181 gctaggcagg ccgttattga tctttttgat aataaagttg cagctgaatg tggccaaagt
      241 cttttgcatg atcataaatg tttttggtta gtagctaaag atggttttta ttttgcaaaa
      301 aatagcccag ataattggga attcaagtat ccatggccgg gtttgtaa
//
LOCUS       XM_071831017            1317 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840770), mRNA.
ACCESSION   XM_071831017
VERSION     XM_071831017.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1317
                     /gene="LOC139840770"
                     /note="uncharacterized LOC139840770; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840770"
     CDS             1..1317
                     /gene="LOC139840770"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687118.1"
                     /db_xref="GeneID:139840770"
                     /translation="MKAISINIRGFKKDGKVGWFNKICITENPSIVVVQETKCRVLSD
                     AWIERLWGNSDYGYVQKAAAGRLGGILTIWDSHAFDVNEVVEGKFFLAIKGKFKGADN
                     DTIMVNVYGPHDDERKKEFWDSLEKLMRFQNPDWILCGDFNEVRHVNKRQNSIFMNHR
                     AGMFNDFIDKMCLIEIPLAGKKFTRICDNGRKFSKLDRFLVSTDFVNRWGNLSSVALE
                     RKLSNHYPIMLSVKNLDYGPKPVRIFDVRYERDGAEDIVKKAWAKQCDSNRPDICFRK
                     KLKQVKDDLRSWNKSMFGSIDEDIELLKVEAEQWELLAENRSLGEDERSRWMDCRDSW
                     IKKDKEKKDMLRQKARINWATEGDENSKFFHVQIKRRNNKNNIRGLYIDGKWEDDPVT
                     VKNAILHHFRSAFCEQNSSRPQLTCGDHAVLSNEDVVILERPFDEK"
     misc_feature    10..693
                     /gene="LOC139840770"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,106..108,328..330,421..423,427..429,589..591,
                     667..672)
                     /gene="LOC139840770"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(106..108,667..669)
                     /gene="LOC139840770"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(328..330,427..429,670..672)
                     /gene="LOC139840770"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaaggcaa tttccattaa tattcgtggt ttcaaaaagg atggtaaagt gggttggttt
       61 aataagattt gcataacaga gaacccttcg attgttgtgg ttcaagaaac taagtgtcgg
      121 gttctaagcg atgcgtggat tgagaggttg tggggcaact ctgactatgg ttatgttcaa
      181 aaagctgctg cgggaagatt agggggtatc ttgacaatct gggatagtca tgcttttgat
      241 gtcaatgagg tggttgaagg gaagtttttt ctagctatta aaggaaagtt caaaggtgca
      301 gataatgata caataatggt aaacgtgtat ggcccccatg acgacgagcg taagaaagaa
      361 ttttgggata gtctagaaaa acttatgagg ttccaaaatc ccgattggat actatgcggt
      421 gatttcaatg aggtcagaca cgtgaataaa agacaaaaca gcatctttat gaaccatcga
      481 gcaggtatgt ttaacgattt tatcgataaa atgtgcttga ttgagatccc tcttgcaggc
      541 aagaaattta ctcggatttg tgacaatggt cgaaaattta gcaagttaga ccgctttcta
      601 gtatcaacgg atttcgtcaa taggtggggg aatctatcct ccgtggcttt ggaaagaaag
      661 ctatcaaatc attatccgat aatgcttagt gttaaaaacc ttgactatgg ccctaaacct
      721 gttaggattt ttgatgtgcg gtatgaacga gatggagctg aggatatagt caagaaggct
      781 tgggctaaac aatgtgattc caacaggcct gacatttgct ttagaaaaaa attgaaacag
      841 gtaaaagatg atttaaggtc atggaataaa agtatgttcg ggtctatcga cgaggatatt
      901 gaactactta aggtagaagc ggagcagtgg gaattacttg ctgaaaatag atcccttggt
      961 gaggatgaac ggtcaaggtg gatggattgt cgggattctt ggattaaaaa agacaaagaa
     1021 aaaaaggata tgttgagaca gaaagctaga atcaattggg caaccgaagg tgacgagaat
     1081 tccaagtttt tccatgtcca aatcaaaaga aggaataaca aaaacaacat tcgtggatta
     1141 tatattgatg gtaagtggga ggatgacccg gttacagtta agaatgcgat tctccatcac
     1201 tttagatctg ccttctgtga acagaactct agtaggccac agttaacctg tggcgatcat
     1261 gcggtacttt cgaacgagga tgtggtaata ttagaaaggc ctttcgacga aaaataa
//
LOCUS       XM_071831018             414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840772), mRNA.
ACCESSION   XM_071831018
VERSION     XM_071831018.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..414
                     /gene="LOC139840772"
                     /note="uncharacterized LOC139840772; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840772"
     CDS             1..414
                     /gene="LOC139840772"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687119.1"
                     /db_xref="GeneID:139840772"
                     /translation="MSAKPSSSSSPSPILILIIITITIAVTVTASPNPVTIDSDILRL
                     PSDDTESGSLCPNSLTAGSCPVKCFRPAPVCGVDNVTYWCGCPEARCAGVSVANLGFC
                     DHENGGSGAVSGQALLLVHIVWLILLGFFVLFGLL"
ORIGIN      
        1 atgtctgcga aaccatcatc atcatcatca ccgtcaccga ttctcattct catcatcatc
       61 acaatcacaa tcgccgttac agtaaccgcg tctcctaatc ccgtcactat cgattcagat
      121 atcctccgat taccatccga tgacaccgaa tccggctctc tctgccctaa ctcattaact
      181 gccggttcgt gtccggttaa atgctttaga cctgcgccgg tatgcggcgt cgataacgtt
      241 acgtattggt gcggttgtcc tgaagcgcgt tgtgctggtg tttctgttgc gaatttaggg
      301 ttttgtgatc atgaaaatgg aggtagtggt gcggtatcag gtcaggcgct tctgttagtt
      361 catattgttt ggctaatatt actcggtttc ttcgttttgt tcggccttct ctga
//
LOCUS       XM_071831019            1644 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UNC93-like protein 1
            (LOC139840773), mRNA.
ACCESSION   XM_071831019
VERSION     XM_071831019.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1644
                     /gene="LOC139840773"
                     /note="UNC93-like protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840773"
     CDS             1..1644
                     /gene="LOC139840773"
                     /codon_start=1
                     /product="UNC93-like protein 1"
                     /protein_id="XP_071687120.1"
                     /db_xref="GeneID:139840773"
                     /translation="MGENGDQETGSPVTNKPITTNFRYNSPLIQIGLIGLVCFCCPGM
                     FNALSGMGGGGQVDHTAANNANTALYTTFAIFGVLGGGIYNILGPRLTLFSGCTTYIL
                     YAGSFLYYNHHKHQAFAIVAGALLGVGAGLLWAGQGAIMTSYPPVHRKGTYISMFWSI
                     FNLGGVIGGLIPFVMNYHRETAVSVNDGTYIGFMVFMTIGSLLALAILHPSKVVRPDG
                     SRCTNVKYSNVMTESVAIAKLFTNWKMLMIVPAAWASNFFYSYQFNNVNGALFTLRTK
                     GLNNVFYWGAQMIGSVMIGYIMDFSFKSRKTRGLVGITVVAVLGTAIWIGGFFNQRGY
                     DYDDVQNKTVKILDFKKDGSDFAGPFVLYFSYGLLDAMFQSMVYWIIGGLANDSIILS
                     RYVGFYKGVQSAGAAVAWQIDAHKVPFMNQLIVNWVLTTISYPLLALLVIKAVNDEDN
                     KVEESNIEVVFFLSLLHYHVNKLIPSMLVNLPQYVESKPRWFWFKDYDATVRLQDATV
                     WLSNEPVRMHLASVRLHSSAGDKNGGRPASTYLTRGLQC"
     misc_feature    88..1323
                     /gene="LOC139840773"
                     /note="Uncharacterized Unc-93-like proteins of the Major
                     Facilitator Superfamily of transporters; Region:
                     MFS_unc93-like; cd06178"
                     /db_xref="CDD:340867"
     misc_feature    order(121..126,133..138,145..147,229..231,388..393,
                     397..405,412..414,484..486,493..498,505..507,754..756,
                     763..768,775..783,790..792,859..861,871..873,1081..1086,
                     1096..1098,1108..1110,1183..1185,1192..1197,1204..1209,
                     1216..1218)
                     /gene="LOC139840773"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340867"
ORIGIN      
        1 atgggtgaaa acggagatca agaaaccggg tcacccgtta caaataaacc cattaccacc
       61 aatttccgat acaattcacc tctgatccaa atcgggctaa tcgggctggt ttgtttctgc
      121 tgcccgggca tgttcaacgc cttgtccggc atgggcggtg gtggtcaagt tgatcacacc
      181 gccgcaaaca acgctaacac cgccctgtac accactttcg ccattttcgg cgttttgggt
      241 ggtggtattt acaacatcct gggcccacgt ctcacacttt tttcaggctg caccacttac
      301 atactttacg ccggttcatt tttgtactac aatcatcata aacatcaagc gtttgcgatc
      361 gttgcaggcg ctctgttagg tgttggtgca gggttactat gggcgggtca gggtgcgatc
      421 atgacgtcat acccgcccgt tcatcgaaaa ggaacttata tttcaatgtt ttggagtata
      481 ttcaatttag gtggtgttat tggcggtttg attccttttg ttatgaacta tcatcgcgaa
      541 accgcggttt cggttaacga tggaacgtat atcgggttca tggtgtttat gacaattggg
      601 agtttacttg ctttagccat tttgcacccg agtaaagtgg ttcgacccga cgggtcgaga
      661 tgtactaatg ttaagtattc gaatgtgatg actgaatctg tagcaatcgc gaaacttttt
      721 acgaactgga agatgttaat gattgtaccg gccgcttggg ccagtaactt tttttacagt
      781 tatcagttta ataatgtgaa tggggctttg tttacattga gaacaaaagg gttgaataat
      841 gtgttttatt ggggggctca gatgattggg tcagttatga ttggttatat tatggatttt
      901 agttttaaaa gccgaaaaac gaggggttta gtggggatta cagttgtggc ggtgttagga
      961 actgcgattt ggatcggtgg gttttttaat cagaggggtt atgattatga tgatgtacaa
     1021 aacaagacgg ttaaaatact ggattttaag aaagatggta gtgattttgc agggccattt
     1081 gtgctttatt ttagttatgg tttgttggat gcaatgtttc agagtatggt ttattggatt
     1141 atcggcggtt tggctaatga ttcaatcatt cttagcagat atgttggatt ctacaaggga
     1201 gtacaaagtg caggtgcagc ggtggcatgg caaattgatg cgcataaagt gccatttatg
     1261 aatcaactga tagtgaattg ggtattaact actataagtt atcctttgtt agcgcttttg
     1321 gttataaaag cagtaaacga tgaagataat aaagtggaag agtctaacat tgaagtagtt
     1381 ttttttcttt ctcttttgca ttaccatgtc aacaagttga taccttcaat gttagtgaat
     1441 ttacctcaat atgttgagag caaaccaaga tggttttggt ttaaagatta tgatgcaacc
     1501 gtgcggttgc aggatgcaac cgtgtggtta tccaatgaac ctgtacggat gcatcttgca
     1561 tccgtgcggt tgcactccag tgcaggtgat aagaatggtg gtagacctgc tagtacgtat
     1621 ttaacaaggg gtcttcaatg ttag
//
LOCUS       XM_071831021             471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840774), mRNA.
ACCESSION   XM_071831021
VERSION     XM_071831021.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..471
                     /gene="LOC139840774"
                     /note="uncharacterized LOC139840774; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840774"
     CDS             1..471
                     /gene="LOC139840774"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687122.1"
                     /db_xref="GeneID:139840774"
                     /translation="MAALSPRNSFCMFDASKLMKLSEMYLMDFNKGERDHLKRELDIY
                     YEVIRRDDKFSNLKGIDDLAKLMVETQKHLLYRYVYWLVKLALVLPVATAKGERCFST
                     MKLVKSDLRSRMNIDDFLNGCLLVAIEKETLVSVTIEAILDRFQRMKYRRGNLY"
ORIGIN      
        1 atggcggctt taagcccacg caattcattt tgtatgtttg atgcatctaa gttaatgaag
       61 ttgagtgaga tgtatcttat ggattttaat aaaggggaaa gagatcatct taagcgtgaa
      121 cttgacatct attatgaggt tatacgtcga gatgacaagt tttctaactt aaaagggatt
      181 gacgaccttg ctaaattgat ggttgaaact caaaagcatc ttttgtatcg ttatgtctat
      241 tggttagtaa aacttgcttt ggttttgcct gttgcaaccg caaagggcga gaggtgtttt
      301 tcgacaatga agcttgtaaa atcagatttg cgtagtcgaa tgaatattga tgattttctg
      361 aacggttgtc ttcttgttgc catagaaaaa gaaacacttg ttagtgttac cattgaagca
      421 attttggacc gttttcaacg aatgaaatat cgtaggggaa atttgtatta g
//
LOCUS       XM_071831022             552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box/LRR-repeat
            protein 23 (LOC139840775), mRNA.
ACCESSION   XM_071831022
VERSION     XM_071831022.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..552
                     /gene="LOC139840775"
                     /note="putative F-box/LRR-repeat protein 23; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139840775"
     CDS             1..552
                     /gene="LOC139840775"
                     /codon_start=1
                     /product="putative F-box/LRR-repeat protein 23"
                     /protein_id="XP_071687123.1"
                     /db_xref="GeneID:139840775"
                     /translation="MSRWGLSLKKIPLLEELSLIHRTMITAEDIDDVGRYCPLLKTFK
                     LNRRGFFKKEEPDHVNYTGIAIAKYLPSLSHLELIGDSLNNIGLQAIMDGCTHLESLD
                     IRQCMYIDLKKDNIGKRCSERFKDVKLPNDSMEGGYMHLVANYEEPSMMIIMISDSDG
                     NMKEFEPWNDTQECNDYVKFYLR"
     misc_feature    <25..>327
                     /gene="LOC139840775"
                     /note="Antagonist of mitotic exit network protein 1;
                     Region: AMN1; cd09293"
                     /db_xref="CDD:187754"
     misc_feature    40..117
                     /gene="LOC139840775"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    118..216
                     /gene="LOC139840775"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    217..291
                     /gene="LOC139840775"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    292..366
                     /gene="LOC139840775"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 atgagtcgtt ggggtctttc tcttaagaaa attccattat tggaggaact cagtctcatc
       61 catagaacaa tgattacggc tgaagatatt gatgatgttg gacgttattg tcccttgcta
      121 aaaacattca aattgaatag aaggggattt ttcaagaaag aagaacctga tcatgtgaac
      181 tatacgggca tagctattgc taaatattta cctagtttaa gccaccttga actcatcgga
      241 gatagcctga acaatattgg gttgcaggcg attatggatg gctgtactca tcttgagtcc
      301 cttgacattc gtcagtgcat gtacattgat ctgaaaaagg acaatattgg aaaaagatgt
      361 tcagaacggt ttaaagatgt aaaacttcct aatgattcta tggaaggggg gtatatgcat
      421 cttgttgcta attatgagga gccaagtatg atgataatta tgatttctga ttctgatggc
      481 aatatgaagg agtttgagcc ttggaatgac actcaggaat gcaatgacta tgtgaaattc
      541 tacctgcgtt aa
//
LOCUS       XM_071831023            2747 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides scarecrow-like protein 14
            (LOC139840776), mRNA.
ACCESSION   XM_071831023
VERSION     XM_071831023.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2747
                     /gene="LOC139840776"
                     /note="scarecrow-like protein 14; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840776"
     CDS             161..2386
                     /gene="LOC139840776"
                     /codon_start=1
                     /product="scarecrow-like protein 14"
                     /protein_id="XP_071687124.1"
                     /db_xref="GeneID:139840776"
                     /translation="MVMEPRDDEYSDYVNGFSLDDETIMPVFSQSSGSANGFRFRDEP
                     LDLSFLEIPKSVPNSAHCMSDISSCLSSQSDSPDEFADCVFKYINQILVDEDIEAKQS
                     MFHDPLALQATEKEFYEALGEKYPAPASNVETNTENFFNGLNEYSNCSTSGSNFTDSY
                     WAGRDSLEPKSSTMPAPSLEYPMLSSFGSTTSATNDHFGTLDSMINTHLVENIFTDSE
                     SILQFNKGMEEASKFLPPIKPLVIDLDQYNLPSNSKDIDSEFTVKDEFLEADNSSSGP
                     RARKYHQMEDNAYVEERSSKQSAVYVEEDVLSEMFDRVVLCTDPGGPSMSACEEPPRN
                     VTKKLQNGQAYGNSSGWITRSWGGSSGEPTDVRTLLVNCAQSVAVNDRTKANEQLKQI
                     RQHASPTGDAPQRLAHIFATGLEARLAGTGSQLYATKSALTISAAEKLKAYQVYLSAC
                     PFKKIAIFFANKVIYEAASTASTLHIVDFGIAYGFQWPVLIKHLAARPGGPPKLRMTG
                     IEFPKPGFRPAEGVEETGRRLANYCAKFNVPFEYNAIATQNWETVRIEDLKLQRNECL
                     AVNTLIRFKNLPDDNTVMVNSPRDGVLKMIRDMRPDIFVQTVVNGSYSSPFFVTRFKE
                     ALFHFSSMFDMFDATLDRNDEQRLNFEKEFCGREAMNVIACEGGERVERPETYKQWQA
                     RLSKAGFKVKPLNSELVSKLKAKVKAGYHKDFVFDEDGKWVLQGWKGRILRASSCWVP
                     A"
     misc_feature    1259..2374
                     /gene="LOC139840776"
                     /note="GRAS domain family; Region: GRAS; pfam03514"
                     /db_xref="CDD:397536"
     polyA_site      2747
                     /gene="LOC139840776"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attttatata taaaaaccta acaaccacct ttcccaaatt tcaaccgtgg aaaataattt
       61 catttctgta tctatagatc tcaccgtccg ttcatcagct aattagaggt gtttttatgg
      121 ttgacttttg atttggtgta tacttgagat agaagtttag atggttatgg agccgagaga
      181 cgacgaatat tcggattatg taaacggttt ttctttggat gatgagacta tcatgccggt
      241 tttcagtcag tcatctggta gtgcaaatgg atttaggttc agagatgagc ctttagattt
      301 aagttttctc gaaattccta aatcggtacc gaattctgct cattgtatgt cagatatatc
      361 atcgtgctta tcgtcccagt cagattctcc cgatgagttt gctgactgtg tatttaagta
      421 cataaatcag attctcgtag atgaagatat cgaggctaag cagagtatgt ttcatgatcc
      481 gttagctctg caagcaactg aaaaagagtt ttatgaagcc cttggtgaaa aataccctgc
      541 tcctgcttca aatgttgaaa caaataccga aaactttttt aacggtttaa acgagtatag
      601 taactgtagc accagtggta gcaactttac tgattcttac tgggcgggtc gtgactctct
      661 tgaaccaaaa tcgtcaacta tgccagctcc ttctcttgaa tacccgatgt tgtcatcatt
      721 tggttctact actagtgcta ctaatgatca ttttggcacg ttagactcga tgataaatac
      781 acacctcgtt gaaaatatat tcaccgatag cgagtctatc ttgcagttca ataaagggat
      841 ggaagaagct agtaaattcc ttcctcctat taaaccttta gttatcgatt tggatcaata
      901 taacttgcca tcaaattcaa aagatattga ctcagagttt accgtgaagg acgagtttct
      961 cgaggcagac aactcgtcca gtgggccccg ggcaagaaaa tatcatcaaa tggaggataa
     1021 tgcttatgtg gaagaaagga gtagtaaaca gtctgctgtt tatgttgaag aggacgtgtt
     1081 atctgaaatg tttgatagag ttgttctctg tacagatcct ggtggtccat cgatgtctgc
     1141 ttgcgaagaa ccacctagaa atgtaactaa aaaactacaa aatggacaag catatggtaa
     1201 tagtagcggt tggattactc gttcgtgggg aggtagttca ggtgaaccga cagatgtcag
     1261 gactctattg gtcaactgtg cgcagtcagt tgctgttaat gatcgtacga aagctaatga
     1321 acaattgaaa caaataagac aacatgcttc tcctacaggt gatgctccac aaaggttagc
     1381 tcatatcttt gctactggtc ttgaggcacg cttagctggc actgggtccc agctttacgc
     1441 tactaaaagt gccttgacaa tttcagctgc tgaaaagttg aaagcctatc aagtctatct
     1501 ttcagcttgc cctttcaaga agatagctat ctttttcgct aataaagtca tatatgaagc
     1561 agcttcaaca gcatctaccc ttcatattgt agattttggt attgcatacg ggtttcagtg
     1621 gcctgttctt attaagcatc ttgcagcgag acctggtggg ccacctaagt taaggatgac
     1681 tggaattgag ttcccgaaac ctggttttag gcctgctgaa ggggtagaag aaacaggacg
     1741 tcgtttggct aactattgtg caaagtttaa tgttcctttc gagtataatg ccatagcaac
     1801 tcaaaactgg gagacggtta gaattgaaga tttaaaactt cagagaaacg agtgtcttgc
     1861 tgtgaacact ctgattcgat tcaaaaactt gcctgatgac aacacagtta tggtgaatag
     1921 tccacgtgat ggtgttttga agatgattag ggatatgaga ccggatattt ttgttcaaac
     1981 tgtggtgaat gggtcttata gttctccatt ttttgttact cgttttaagg aggccctttt
     2041 tcatttctct tccatgtttg atatgtttga tgctacttta gaccgtaacg atgagcaaag
     2101 attgaatttt gaaaaggagt tttgtgggcg tgaagctatg aatgtgattg cgtgtgaagg
     2161 tggtgagagg gtcgaaaggc ccgaaacgta caagcagtgg caggcccgac tctcgaaagc
     2221 tggattcaag gtcaaaccct tgaattcgga gctggtttct aaactgaagg ccaaagtgaa
     2281 agcagggtat cataaagatt ttgtgtttga tgaagatggt aaatgggtgt tgcagggatg
     2341 gaaaggtcgt attttgcgtg ctagttcatg ttgggttcca gcctaagagt cttatattgt
     2401 cgactccaca tgtgggccag gggaattcct ttgggctcgt ctttcatgga gctctcctgt
     2461 gtggagtttt tggaacttga caaaagatga tctaccgtag tggctggttc tgtccgagat
     2521 ggtcttttgt ataagaagga tgaactgtaa ggaccaattt tgtgagctac aagtcatgct
     2581 ctatatctta tacttgtttc aggagttggt taataatttt tgatcacatt gttatggtat
     2641 tttacaatat attgccatag gaatattgtg ctagtgtact ggaatgttga tgtaagttgt
     2701 aactgaaact ttatgtgtaa gtaacctcgg tatgacgcac ctttaga
//
LOCUS       XM_071831024             957 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840777), mRNA.
ACCESSION   XM_071831024
VERSION     XM_071831024.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..957
                     /gene="LOC139840777"
                     /note="uncharacterized LOC139840777; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840777"
     CDS             1..957
                     /gene="LOC139840777"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687125.1"
                     /db_xref="GeneID:139840777"
                     /translation="MLRGSSDDSFRMLPIYLHNLKIHNPGTITNLVTDKENKFVMCYM
                     SIGVVIRSFVQHVRPIIIVDAAHLKGGYLGTNLVAVAMDGNNGILPLAYGIGEGETNS
                     VWSWFFGNLRDHLMSYGMVDRMSEITFISDRAASIAHGIANVFPEAFHAHCARHLFMN
                     IKTKSNKMKFFDWHFWKMVKAYRASDFHDHLDVFRRRLKASYKVLCEDGESTSQRARN
                     TTSKAKETVEPSQAYQSQFYPTRKDARSTLRLLNKKAQRRKKHLAPAAKHEAQGRKKD
                     LASTAITGCKVARSDYTPLRLQKYSYGPVHSLQHLRFYTQIT"
     misc_feature    178..480
                     /gene="LOC139840777"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    <232..780
                     /gene="LOC139840777"
                     /note="Transposase, Mutator family; Region:
                     Transposase_mut; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 atgttacgtg gcagtagtga tgactccttt agaatgcttc ccatttacct tcataacctt
       61 aagatccaca acccggggac catcaccaat ttggttaccg ataaagaaaa taaatttgtg
      121 atgtgttaca tgtccattgg agtagttatt cgatcatttg tgcaacatgt ccgcccgata
      181 atcatcgtcg atgctgcaca tttaaagggt gggtacctgg gtactaattt agttgctgtt
      241 gcgatggatg gcaataatgg aattttgcca ttggcttatg gaattggtga aggcgagaca
      301 aacagtgttt ggtcatggtt ttttggtaac ctaagagatc atttaatgag ttatggtatg
      361 gttgatcgta tgtcagagat tacttttatt tctgatcgtg ctgcttcaat agcacacggc
      421 attgcaaacg tgtttccgga agcgtttcac gctcattgtg cacgtcattt attcatgaac
      481 atcaaaacta aatccaacaa gatgaaattc ttcgactggc acttttggaa aatggttaag
      541 gcgtaccgtg cgtcggattt tcatgatcat ctagatgtat ttcgaaggag attgaaagcg
      601 tcttataaag ttctatgtga ggatggtgaa tcaacttctc aacgggcaag aaacacaacc
      661 tcaaaggcga aagagacagt cgaaccatct caagcttatc aatctcagtt ttatccaacg
      721 cgcaaggacg caagaagcac cttacgcctg cttaataaaa aggcgcaaag acgcaagaaa
      781 caccttgcgc ctgctgctaa acacgaggcg caaggccgca agaaggacct tgcgtctacg
      841 gctattacgg gatgcaaggt cgcaaggtct gattacacac ctttgcgcct tcaaaaatac
      901 agttacggac ctgttcacag tttacaacat ttacggtttt atacacaaat tacataa
//
LOCUS       XM_071831025            1164 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840779), mRNA.
ACCESSION   XM_071831025
VERSION     XM_071831025.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1164
                     /gene="LOC139840779"
                     /note="uncharacterized LOC139840779; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840779"
     CDS             1..1164
                     /gene="LOC139840779"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687126.1"
                     /db_xref="GeneID:139840779"
                     /translation="MDVEDEFIFLIILYWYVRQRNSLRIERLPDTNSALTGHAYTQEL
                     LSGSNTQCHQLMRLSRDAYVLLCDLFKERNWLQDSRYVSVEEKMAIFLTILGQNDGFR
                     EIKYRFQHSLRTIHICFHEVLQGMMEFAREAIGPSSLNVSPTASDRHRYLREVFSGAI
                     GALDGTLVHAIVPAKQQSAYRGRGGGRCYQNVLGICDFNMVFTYVWAGWEGIAHDSRV
                     LNEVLYNPTSGFPIPPPNKYYLCDAAYANTRGFLAPYRNIRYWLANFRRRRALTSEEK
                     FNHGHAQLRNVIERAYGVLKERFPILREMAPYSFPVQRNVVIVCFAIHNFIRKWNIHD
                     ELFMECDANDEENEGDEDVEEHVDGGEDEPESQGDAQSAQYMSNLRDEIASNI"
     misc_feature    487..975
                     /gene="LOC139840779"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 atggacgttg aagatgaatt tatattctta atcattctat attggtatgt gagacaaaga
       61 aactcattaa gaattgaaag gttaccggat accaactctg cgttaactgg acatgcgtac
      121 acacaagagt tattaagtgg atcaaacaca caatgtcacc aactgatgcg tctctcacgt
      181 gatgcatatg ttcttttatg cgaccttttt aaagaaagaa attggttgca ggatagtagg
      241 tatgtaagtg ttgaggagaa gatggcaata tttctaacca ttcttggaca aaatgatgga
      301 tttagagaaa ttaaatatag atttcaacac tctttacgaa ctattcatat atgttttcat
      361 gaagttttac aaggaatgat ggagtttgcg agagaagcta tagggccgtc atcactcaat
      421 gttagcccga ccgcgtccga tcgacataga tatttgagag aagtattttc gggagcaata
      481 ggtgcactag atgggactct tgtgcatgcg attgttcctg ctaagcaaca aagtgcttat
      541 agagggcgag gtggtggtcg atgctatcaa aatgttttag ggatatgtga cttcaatatg
      601 gtatttacat atgtatgggc tggatgggaa ggtatagctc atgattcaag agtactaaat
      661 gaagttttat acaatcccac ttccggtttt ccaattcctc caccaaataa atattattta
      721 tgtgatgctg catatgcaaa tactcgtggg tttctagctc catatcgtaa cataagatat
      781 tggttggcta actttcgacg tcgtcgtgct ttaactagcg aagaaaaatt taatcatgga
      841 catgcacaac ttagaaatgt cattgaacgt gcttacggag ttttgaaaga aagatttcca
      901 atcttaagag agatggctcc ttattcattc ccggttcaaa gaaatgtggt aattgtgtgt
      961 tttgcgatac ataattttat tagaaagtgg aatattcatg atgagctttt catggaatgc
     1021 gacgcgaatg atgaagagaa tgaaggagac gaagatgttg aagaacatgt agatggtggg
     1081 gaagacgaac ccgaatcaca aggggatgct caaagtgcgc aatacatgtc aaatttgcgt
     1141 gatgaaattg caagcaatat atga
//
LOCUS       XM_071831026            1383 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840780), mRNA.
ACCESSION   XM_071831026
VERSION     XM_071831026.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1383
                     /gene="LOC139840780"
                     /note="uncharacterized LOC139840780; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840780"
     CDS             1..1383
                     /gene="LOC139840780"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687127.1"
                     /db_xref="GeneID:139840780"
                     /translation="MAKNPKIPIKAVRSYLETYSKLLISDHKSYRAVRRATMMIQGDY
                     KSQYAELIDYVCELKREGFKAIGRDLLGLDGAFMKQPATGCILSVVGVDSNNGIYPVA
                     YAIVEQECGSSWTWVLKCLGQDINLSTNSNYTFISDRQKFNFDYFMLLGFNTSCYKCV
                     SLAEHRHCLRHIHGNMKGQFRGVAYKNHLWRCASVTTVPEFEQAMQQLKEFDNEAFVW
                     LAKIPAHQWARSHFTGRAVSDVLLSNMCECFNKWLVDAHDKPIVTALEYIREYCMKRI
                     ANVKINISKTNGSLTPAATKLFKKIKSEAHQCTVLWGGNYRYQVSGKVNQYVMDMETR
                     SCACRKWELTGIPCKHAIAVFYNMCENGLETGEPETWVHLVYLLNTWINTYQYTIEPM
                     NGRSLWPKAEGKLKKCGTCGTYGHNKRRCTCEKKRSGNVDNKWTKKLVQEKKSPSKKT
                     MAVGKGKKKM"
     misc_feature    208..516
                     /gene="LOC139840780"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    1000..>1065
                     /gene="LOC139840780"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atggcaaaga atccaaagat acctattaaa gctgtcagat cttatttgga aacatatagt
       61 aaactactca tcagtgatca taaatcatat cgtgctgtga gaagggcaac aatgatgatt
      121 caaggggatt ataaatctca atatgctgag ctcatagatt atgtttgtga gttgaagaga
      181 gaagggttta aagcaatagg tagagatctg ctagggctgg atggtgcttt tatgaaacaa
      241 cctgcaactg gttgtatttt gagtgttgta ggggttgact caaacaatgg catatatcct
      301 gtagcatatg ccattgttga acaagagtgt ggttcatcct ggacttgggt cttaaagtgc
      361 ttgggtcaag atattaactt gtctaccaat tctaactaca ctttcatcag tgacagacaa
      421 aagtttaact ttgattactt tatgttgtta gggtttaata caagctgtta caaatgtgtt
      481 tccttggctg agcatagaca ctgccttaga catattcatg ggaatatgaa aggccaattt
      541 aggggtgttg cttataagaa tcacttgtgg agatgtgcga gtgtaacaac agttcctgag
      601 tttgagcagg ctatgcaaca attgaaggag tttgataatg aagcttttgt ttggttagct
      661 aaaattcctg cccatcagtg ggcaaggagt cattttacag gaagggctgt gtcagatgtc
      721 ttgctcagta acatgtgtga gtgttttaac aaatggttag ttgatgcaca tgacaaaccc
      781 atagttacag ctttagaata catccgagag tattgcatga aaagaattgc taatgtaaag
      841 atcaacattt ccaagactaa tggttcttta acacctgcag ccaccaaatt gtttaagaaa
      901 atcaaatctg aggctcacca gtgtactgtc ttatggggtg gaaattatag gtaccaagtg
      961 agtggaaaag ttaatcaata tgttatggat atggagacta ggtcatgtgc ttgtagaaag
     1021 tgggaactaa caggaatacc ttgtaagcat gcaattgcag tgttttataa catgtgtgaa
     1081 aatggtttgg aaactggtga accagaaaca tgggttcatc tagtttattt gttaaataca
     1141 tggatcaaca cttaccaata taccattgag ccaatgaatg ggagaagttt atggccaaag
     1201 gcagaaggca agttaaagaa gtgtggcaca tgtggtactt atggacacaa taagagaaga
     1261 tgtacatgtg agaagaaaag aagtgggaat gtggataaca agtggacaaa aaagttggtt
     1321 caagaaaaga aatctccttc aaagaagaca atggcagttg gaaaagggaa gaagaagatg
     1381 tga
//
LOCUS       XM_071831028             633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rhodanese-like
            domain-containing protein 14, chloroplastic (LOC139840781), partial
            mRNA.
ACCESSION   XM_071831028
VERSION     XM_071831028.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..633
                     /gene="LOC139840781"
                     /note="rhodanese-like domain-containing protein 14,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139840781"
     CDS             <1..597
                     /gene="LOC139840781"
                     /codon_start=1
                     /product="rhodanese-like domain-containing protein 14,
                     chloroplastic"
                     /protein_id="XP_071687129.1"
                     /db_xref="GeneID:139840781"
                     /translation="IQFYQTHPKSSTRKQSISRFTIKSATTKTAKTPAEEEWKTKREL
                     LLQKRVRSVDVKEALRLQQENNFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWD
                     IARRVAFAFFGIFSGTEENPEFLQSVESKLDKSSKIIVACASGGTMKPTQNLPEGQQS
                     RSLIAAYLLVLNGYDNVFHLEGGLYQWFKEDLPIESDE"
     misc_feature    145..594
                     /gene="LOC139840781"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; Region: PspE; COG0607"
                     /db_xref="CDD:440372"
ORIGIN      
        1 attcagtttt atcaaacgca ccctaagtct tctacaagga aacagtctat ctccaggttc
       61 actatcaaaa gtgcaacaac caaaactgca aaaacacctg ccgaagaaga gtggaagaca
      121 aagagggagc tcctgttaca aaaaagggtt cgaagtgtag atgtgaagga agcattacga
      181 cttcagcaag aaaataactt tgtgattctt gatgtgagac ccgaagcaga gtttaaagag
      241 ggtcatccgc caggtgcgat taatgtacaa atctacaggc tcataaagga gtggactgcg
      301 tgggatattg ctagacgagt ggcatttgcg tttttcggta tcttttctgg aacagaagag
      361 aatcctgaat ttttacaaag tgttgaatca aaattagata aaagctcaaa gattatagta
      421 gcttgtgcat ctggaggtac aatgaaacct acccaaaatc ttcctgaagg gcaacaatca
      481 aggtcactta tagcagccta tttgctagtg ctgaatggtt atgataatgt cttccatttg
      541 gagggaggac tgtatcagtg gttcaaagaa gacctgccta tagaatcaga tgaatgaagt
      601 tttgagccac agagagtttt tttttttttt tcc
//
LOCUS       XM_071831029             909 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840782), mRNA.
ACCESSION   XM_071831029
VERSION     XM_071831029.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..909
                     /gene="LOC139840782"
                     /note="uncharacterized LOC139840782; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840782"
     CDS             1..909
                     /gene="LOC139840782"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687130.1"
                     /db_xref="GeneID:139840782"
                     /translation="MADTRWWLHPQHKDTGTSIWESSWETIKIEEYAKMNEFKAVSGD
                     TSQKAWSEDEHMFAYENPEKLYSEMEPELTGINKTGPWWCTTDLNDLASFVSERSLQH
                     FGPPQTLKSSEGQRVDSDKGPASLDQVTNFAESMPKSANLIGIGESCVPCGLDDTSGE
                     AENLRVLSKAEMLEALCHSQTRAREAEKAARKVYNEKEHMITLFLKQASQLFAYKQWL
                     HILQLETACLHLRSSKCQLVYTLFPDFVPWVDTEDAKKVLRKAVKRKRGSPRYKLCKS
                     FGRVVLSLSLVGAGLLLGWTLGWLSR"
ORIGIN      
        1 atggctgata cgagatggtg gttacaccca caacataaag ataccggtac atctatatgg
       61 gaatcatcat gggaaaccat aaaaattgaa gaatatgcaa aaatgaacga attcaaagct
      121 gtaagtgggg acacttcaca aaaggcatgg tccgaagatg aacatatgtt cgcatatgaa
      181 aatcccgaaa agctttattc tgaaatggag cctgaattga ctggaatcaa caaaacagga
      241 ccatggtggt gcactaccga cttgaatgat ctggcttctt ttgtctctga acgatcgctt
      301 cagcattttg gccctccaca aactttgaaa agtagtgaag gtcaacgggt tgactctgat
      361 aaaggtccgg cttccttaga tcaggttaca aacttcgccg agtccatgcc aaaatctgcc
      421 aacttgatag gcatcggtga atcatgtgta ccgtgtggtt tggatgatac atcgggtgag
      481 gctgaaaact tgcgggtgtt gagcaaggct gagatgctgg aagcgctttg ccattcgcaa
      541 acacgagcac gagaggccga aaaagccgca cgaaaagtat acaacgaaaa agaacacatg
      601 attacactat ttctaaaaca agcttcacag ctttttgctt acaagcaatg gttgcatata
      661 ttgcaattgg aaacagcttg ccttcacctt agaagcagca agtgccagct cgtttatacg
      721 ctttttccag attttgttcc gtgggtcgat acggaagatg caaaaaaggt tctgcgtaag
      781 gctgttaaga ggaaacgtgg ttcaccgaga tataaattat gcaagtcttt tgggagggtt
      841 gtgttgagtt tgagtcttgt gggtgctggt ttattacttg gttggacatt gggttggtta
      901 tctagatga
//
LOCUS       XM_071831030            1542 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840783), mRNA.
ACCESSION   XM_071831030
VERSION     XM_071831030.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1542
                     /gene="LOC139840783"
                     /note="uncharacterized LOC139840783; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840783"
     CDS             1..1542
                     /gene="LOC139840783"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687131.1"
                     /db_xref="GeneID:139840783"
                     /translation="MKCFNELGDAKLTYNVARFVKVTGYVEAKLTMKNMLNVIPQLKA
                     SMTENQQKIFRGTCFGPWLDLSYTGNDPGLVHAMLQRKSERPIGIDEKYPADDEEIWF
                     SFRPNFKIRFSRREFCLITGFKFSRRTDMAHYIPRSYDVETPPIRRRCFPNRKDNSNI
                     TITDIQKLLYDGADFVVSDDDVVRLAIILIVERAFMGKQGIHVVSKKYLWLVEDFAKL
                     NDYPWGNRIWDATYPVVKDGFQARESQLEVGKGYTLVGFMWSFKRVLPRASQYSTPII
                     PTDSFACSSRWTVMPLGFLSRLAAFQSYYDDTQREEEKRKEAEKRGEVAITGENPPDY
                     MYLIGLGDGSDELYPSWAYCDKILIPVHFYDAQHFILIVLNLEEQKILVYDSLPGHVD
                     QEIVKLTKDLGDQLPVYLRAIDYINQKQDSQIVDYLENKESIEFMIEAAPVVPVQGGS
                     NGDCGVWVCIHMERVIFGWDEIPNIGDPKKAAEDYRVRMAKTFFRARFDTQEPPPKGK
                     AKHGN"
     misc_feature    295..693
                     /gene="LOC139840783"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
     misc_feature    <1060..1473
                     /gene="LOC139840783"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 atgaaatgct tcaacgagct tggtgatgca aaactcactt ataatgttgc tagatttgtt
       61 aaagttacag gatatgttga ggcgaagttg acgatgaaga atatgctgaa tgttatacct
      121 caactaaagg catcaatgac tgagaatcaa caaaaaattt ttaggggaac ttgttttggt
      181 ccttggctag atctttctta caccggcaat gatccgggcc ttgtacatgc aatgctccaa
      241 agaaagagtg agcgaccgat aggaatagat gaaaagtacc ctgctgatga tgaggaaata
      301 tggtttagtt tccgtccgaa tttcaaaatt agatttagta ggcgggaatt ttgtctcatc
      361 acggggttta agtttagtcg tcgcacggac atggcacatt acattcccag aagttatgat
      421 gtagaaacac caccgattag acgacgttgt ttcccaaatc gtaaagataa ttcaaacatt
      481 acaattaccg atatccaaaa gcttttatat gatggtgctg attttgtggt tagtgatgat
      541 gatgtcgtgc gactagccat tattttgatt gtggagagag cgtttatggg taagcaaggg
      601 attcatgtgg tgagcaaaaa atacctatgg ctagtcgaag actttgctaa attgaatgac
      661 tacccgtggg gtaatcgtat ttgggatgcc acttaccccg tagttaaaga tggatttcaa
      721 gctcgggaaa gtcagttaga ggtgggaaag ggttatactt tggtcggttt tatgtggtca
      781 tttaagaggg ttctcccccg agcaagccag tattccactc ctattatccc gaccgactcg
      841 tttgcgtgta gttctcgatg gactgtcatg ccattgggtt tcctttctag gcttgcagcg
      901 tttcagtcct attatgatga tacacaaagg gaggaagaga aacggaaaga agcggagaaa
      961 agaggagaag tagcaatcac aggggagaat ccacctgatt atatgtattt gattggatta
     1021 ggggatggta gtgatgagct atatccatcc tgggcctatt gtgataagat tttgatcccc
     1081 gttcactttt acgatgctca acactttatt ctgattgtgt tgaacttgga ggaacagaag
     1141 atattggtgt acgatagttt gcccggtcat gttgatcaag aaattgtcaa gctcaccaaa
     1201 gatctgggag atcaattgcc tgtatactta agagcaattg attacattaa ccaaaagcaa
     1261 gactcccaga ttgttgacta cttggaaaac aaggagagca tcgagttcat gatcgaggca
     1321 gcaccagtcg tgccggtgca aggtggaagt aatggggact gtggtgtttg ggtctgcatc
     1381 catatggaga gggtgatctt tgggtgggat gaaatcccaa acattggaga tcctaaaaag
     1441 gccgcagaag actacagagt gagaatggcc aagaccttct ttcgtgcacg ctttgatacc
     1501 caggaacctc caccaaaagg gaaagcaaaa catggtaact ga
//
LOCUS       XM_071831031             624 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL3 (LOC139840784), mRNA.
ACCESSION   XM_071831031
VERSION     XM_071831031.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..624
                     /gene="LOC139840784"
                     /note="probable serine/threonine-protein kinase PBL3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 33 Proteins"
                     /db_xref="GeneID:139840784"
     CDS             1..624
                     /gene="LOC139840784"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL3"
                     /protein_id="XP_071687132.1"
                     /db_xref="GeneID:139840784"
                     /translation="MGNNLGKLTRIDPSTEKSRGQEYLNHFQPCRTEIFTYNILKEAT
                     RKFSNKNLVGQGGCGDVYKGWLDYRTKESAKQGYGLAVAIKKIKKEGSQGLDEWRNEL
                     RILSSFYHPNVVQLLGFCADGVHRMLMFEFIAMGILEENLSRGCTPNGPAMTVTLLPE
                     CSRKVSWRKRMKISIGIARGLMYLHTMDRPIIHRDIKSANILLDHVG"
     misc_feature    157..>612
                     /gene="LOC139840784"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(157..168,175..177,181..183,247..249,253..255,
                     340..342,388..399,583..585,595..600,604..606)
                     /gene="LOC139840784"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgggcaaca atttaggaaa gctcactcgt atcgatcctt ccacagagaa atcaaggggt
       61 caagagtatc taaaccactt tcaaccctgt agaacagaga tttttacata caacatattg
      121 aaagaagcaa ctagaaaatt cagtaacaaa aatttagtag gacaaggagg gtgtggtgat
      181 gtatataaag gttggctgga ttatcgaacc aaagagtctg caaaacaggg atatggatta
      241 gcggttgcca ttaaaaagat caagaaagaa ggatctcaag gattagatga atggaggaat
      301 gaattgagga ttctaagtag cttttatcat ccaaatgtgg tgcaattgtt gggattttgc
      361 gctgatggcg tacatcgaat gctaatgttt gagtttattg ctatgggaat tttggaggag
      421 aatctttcaa gaggttgcac acccaatggg ccggccatga ctgtcacctt gctgccagaa
      481 tgtagtagaa aagtaagttg gagaaagcga atgaagatct cgattgggat agcaagaggt
      541 ttaatgtatc tgcacacgat ggacagaccg atcatacatc gtgacattaa gtctgccaat
      601 attcttcttg accatgtcgg ttaa
//
LOCUS       XM_071831032            1092 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            SPEECHLESS-like (LOC139840785), mRNA.
ACCESSION   XM_071831032
VERSION     XM_071831032.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1092
                     /gene="LOC139840785"
                     /note="transcription factor SPEECHLESS-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139840785"
     CDS             1..1092
                     /gene="LOC139840785"
                     /codon_start=1
                     /product="transcription factor SPEECHLESS-like"
                     /protein_id="XP_071687133.1"
                     /db_xref="GeneID:139840785"
                     /translation="MVGEFTCLPNFYTSSEQYDSTKFVSNGLTSLDDIFSILEALEGV
                     SDEFTSLIDESADCGMKDNGLDTLVSQNPTSLSGIQERIETEIEMCLPKNKRRKVMEE
                     GCDKEDGHVKNNHVIVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVINYITE
                     LQQVLQSLEAKKQRKVYSDVLSPKNISSPRTLPLSPRIPPLSPRPSLPISPRTPQSVS
                     PYKHRLPSATSYLSSSSMANTTPSSPCNSTSNSGTINELFATSKSSVADVEVKFSGPN
                     LVLKMVSPRLPCQATKIMSVLEDLSLEILQATINTVDETMVNTFTIKVNTNIYLNFIR
                     EVRSSTSLSCNIALNVIHDLKYPPRSSFT"
     misc_feature    340..555
                     /gene="LOC139840785"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein FAMA and similar proteins;
                     Region: bHLH_AtFAMA_like; cd11448"
                     /db_xref="CDD:381454"
     misc_feature    order(343..348,355..360,364..369,379..381,436..441)
                     /gene="LOC139840785"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:381454"
     misc_feature    order(373..378,385..387,394..399,406..408,439..444,
                     451..456,463..465,472..474,481..486,493..495,502..507,
                     511..516,523..525,532..537,544..546,553..555)
                     /gene="LOC139840785"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:381454"
ORIGIN      
        1 atggtgggcg agtttacttg tttacctaat ttctacacat ctagtgagca atatgattca
       61 accaaattcg tgtcgaacgg actaacatct ctggatgaca tttttagtat tcttgaagcg
      121 ttagaaggtg tttcggatga atttacatcc ttgatagatg aatcagctga ttgtggtatg
      181 aaagataatg ggttggacac attagtgtcc cagaacccga cttcgttgag tggcatacaa
      241 gagcgtatag aaactgaaat tgagatgtgt ttaccaaaaa acaaaagacg gaaggtcatg
      301 gaagaaggtt gtgataagga agatggacat gtaaagaaca atcatgtcat agtggagagg
      361 aaccggagga agcaaatgaa cgaacactta accgttcttc gctcactaat gccttgtttt
      421 tatgtcaaaa ggggtgatca agcatcaata attggtggtg tgattaatta cattactgaa
      481 ttgcaacaag tgctacaatc attagaggca aagaagcaaa gaaaagttta cagtgatgtt
      541 ttgagcccaa agaacatttc aagccctaga acgttacctt tgagccctcg aataccgcct
      601 ttgagcccaa gaccaagctt accaattagc ccaagaactc cacaatcagt aagcccatac
      661 aaacataggt taccttctgc tacatcttat ctatcttcat catccatggc taatactact
      721 ccatcttcac cttgtaattc aacatcaaat tctggaacaa ttaacgagct ttttgcgact
      781 tcaaagtcgt cggttgctga tgttgaggtg aagttctcag ggcctaatct tgttctgaaa
      841 atggtatcac ctcggttacc atgccaagct acaaagataa tgtcggttct tgaagacttg
      901 tctcttgaaa tcctccaggc tacaatcaac actgttgatg agaccatggt taacacattt
      961 acaatcaagg tgaacacaaa tatatactta aattttatac gagaggtaag gagttcgact
     1021 tcgctgagct gcaacattgc actcaatgtt atccatgatc tgaagtatcc acccaggtcc
     1081 tctttcactt ag
//
LOCUS       XM_071831033             756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides reticulon-like protein B6
            (LOC139840786), mRNA.
ACCESSION   XM_071831033
VERSION     XM_071831033.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..756
                     /gene="LOC139840786"
                     /note="reticulon-like protein B6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840786"
     CDS             1..756
                     /gene="LOC139840786"
                     /codon_start=1
                     /product="reticulon-like protein B6"
                     /protein_id="XP_071687134.1"
                     /db_xref="GeneID:139840786"
                     /translation="MADEHESSHAKDKITETFHDEDSSSSSDSDSKPPPKKTFPVPPN
                     RANANNVSWKEKPVHDLLGGAKAADLFLWRNKKKSIIVLGSVTIIWALFEMIEYHLLS
                     LLCHVLILVLGVHFLWSNTLNLFYKCPQFPQVALEEDTVLQIASVARLEINNFLEVLR
                     EIASGKDLKKFLTVIAGLWVVSIAGSCCTLLTLVYICFVLLHTVPVLYERHKEKADVL
                     LDKGEAELKKQYEVLHEKVLSKVPKSFKEKKLA"
     misc_feature    202..666
                     /gene="LOC139840786"
                     /note="Region: Reticulon; pfam02453"
                     /db_xref="CDD:460562"
ORIGIN      
        1 atggccgatg aacacgaatc atcgcatgcc aaagataaga taacagaaac atttcacgat
       61 gaagattctt catcatcatc ggattctgat agcaaaccac cacccaaaaa gacttttcct
      121 gtaccaccaa acagagccaa tgctaataac gtttcgtgga aggagaagcc tgttcacgat
      181 ctcttaggag gggctaaagc tgctgattta tttctctgga gaaataagaa gaaatctatc
      241 attgtgcttg gttctgtcac tataatatgg gccctcttcg aaatgatcga atatcactta
      301 cttagtctac tttgccacgt tctaattcta gttctcgggg ttcattttct gtggtcaaac
      361 acgctcaatc tcttctacaa atgcccacaa ttcccacaag ttgctttgga agaagatact
      421 gtcttgcaga tagcctctgt cgctaggctt gaaatcaata attttctaga ggttcttcgg
      481 gaaatagctt ctggaaaaga cctcaagaaa tttctaactg tgattgctgg tttgtgggtt
      541 gtatcgattg caggaagctg ttgcaccctc ttgaccttgg tgtatatatg ctttgttctc
      601 ttgcacacgg tgcctgtgct gtacgagcga cacaaggaaa aggctgatgt gttacttgat
      661 aaaggagagg ctgagttgaa aaagcaatat gaggttttac atgagaaggt tttgagcaaa
      721 gttcctaaat cattcaagga gaagaaactc gcatag
//
LOCUS       XM_071831034            1422 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable polygalacturonase
            (LOC139840787), mRNA.
ACCESSION   XM_071831034
VERSION     XM_071831034.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1422
                     /gene="LOC139840787"
                     /note="probable polygalacturonase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     Proteins"
                     /db_xref="GeneID:139840787"
     CDS             1..1422
                     /gene="LOC139840787"
                     /codon_start=1
                     /product="probable polygalacturonase"
                     /protein_id="XP_071687135.1"
                     /db_xref="GeneID:139840787"
                     /translation="MAISTNFTVALLLIGVLQLISFTECRIHVLSGSEVTYPAINCRK
                     HTAFLTDFGGNGDGQTSNTAVFQNAVKNLSQFADNGGAQLIVPPGKWLTGSFNLTNHF
                     TLFIQFGAVILASQDEAEYPVVEPLPSYGHGRDGPGGRFNSLIGGSHLTDVIITGYNG
                     TIDGQGSLWWKKFHKKKLKYTRPYLIELIYSNQIQISNLTLIDSPSWFVHPVYSSDII
                     IQDLTIRAPVDSPNTDGINPDSCKNVKIQDVFIVSGDDCVAIKSGWDEYGIKFGMPTE
                     QMIIRRLTCISPDSAMIALGSEMSGGIKNIRAEDISAINTESAVRIKTAPGRGAYITD
                     IFVDRMNLQTMKYVFWTTGSYGQHPDPGYDPNALPKVDGINYRNVVAKDVKMAGNMGG
                     IDGDPFTGFCLSNVTIGLSEKPKKLQWNCTEISGVSSNVTPQTCDAFPDNGSMECEYP
                     LDTVPVDTVELKTCSFTTANLIL"
     misc_feature    148..1227
                     /gene="LOC139840787"
                     /note="Polygalacturonase [Carbohydrate transport and
                     metabolism]; Region: Pgu1; COG5434"
                     /db_xref="CDD:444185"
ORIGIN      
        1 atggccattt caactaattt caccgtggct ttgttgctta ttggagtatt gcagttgatc
       61 tcctttactg aatgccgaat acatgtgtta tctggatctg aagtaactta tcctgcaata
      121 aactgtcgaa aacataccgc ttttttgaca gattttggag gcaatggtga tggacaaact
      181 tcaaacacgg cagtttttca aaacgctgtg aagaatctta gtcagtttgc agacaacggt
      241 ggggcacaac ttattgtgcc acccggaaaa tggctaactg gtagtttcaa tcttaccaac
      301 catttcacac tgttcatcca attcggtgca gttattcttg cctctcagga tgaggcggag
      361 tatccggtag ttgaaccact gccttcatat ggtcatggaa gagatggacc tggaggaagg
      421 tttaacagtc ttataggtgg atcacatctt actgatgtta ttattacagg ttataatggt
      481 acgattgacg ggcaaggttc gttatggtgg aaaaagtttc ataaaaagaa attaaagtat
      541 acaagaccgt acctgattga gttaatatat tcgaaccaaa ttcaaatatc caacctcact
      601 ttgattgact cgccttcttg gtttgttcat cctgtttata gcagtgatat tataattcaa
      661 gatttaacca ttcgagcacc cgtagattct cctaatacag atggaatcaa tccagattct
      721 tgtaaaaatg taaagattca ggatgtgttc atagtatcag gtgacgattg tgtagctata
      781 aaaagtggat gggacgaata cgggattaaa ttcgggatgc caaccgaaca aatgatcatc
      841 aggagactaa cttgcatttc gcccgatagt gcaatgattg cactcggaag tgaaatgtca
      901 ggcgggataa aaaacatcag agccgaagat atttcagcga ttaataccga atctgcagtt
      961 agaattaaaa ctgctcctgg taggggagca tacattacag acatatttgt ggaccgaatg
     1021 aatttgcaaa cgatgaagta tgttttttgg acgactgggt catatgggca gcacccggat
     1081 cccgggtacg acccaaacgc actcccgaaa gttgacggga ttaattacag gaatgtggtt
     1141 gctaaagatg tgaaaatggc tgggaatatg ggtggaattg atggtgaccc gtttaccgga
     1201 ttttgtcttt caaatgttac tatagggttg agtgagaaac cgaaaaaact gcagtggaat
     1261 tgtactgaaa tttcgggtgt ttcgagtaat gtgacgccgc aaacgtgtga tgcttttccg
     1321 gataacgggt caatggagtg cgagtatccg ttagatacgg tcccagttga tacagttgag
     1381 ttgaagactt gttcttttac tactgctaac cttattttgt aa
//
LOCUS       XM_071831035            1023 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840788), mRNA.
ACCESSION   XM_071831035
VERSION     XM_071831035.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1023
                     /gene="LOC139840788"
                     /note="uncharacterized LOC139840788; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840788"
     CDS             1..1023
                     /gene="LOC139840788"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687136.1"
                     /db_xref="GeneID:139840788"
                     /translation="MGGGGLESNVSCRNISGRTVWKEIIKAGKIADSTGASFSSSITK
                     CLGNGVSIKFWNDIWFGSERFSTLFHRLYMLETNKDASIAERITHSNGSSVGNWCWTR
                     PPTGRATNEITELNNIVSSVTLSDKQDSWKYNLDPTGIFTTKSLTLLINTPRLGSNAL
                     SLSIPRNKLLPQKVYIFIWRAIQKKIPVRLEIDKRGIDLDSTLCPLCELNIETTEHIL
                     SSCPKTALIWKLILDWWAQDYSLISNLNDAIINKQPFALSNFGFSIWQATKWITCYII
                     WKHRNLKVFSKKTWSPGSIISEIQTQSYSWISKRSRKKKSIEWHQWLINPSFFVADTP
                     HRVGFG"
     misc_feature    <499..672
                     /gene="LOC139840788"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggggggcg gggggttgga atctaacgtt tcttgcagga acatttcagg tcgcacggtt
       61 tggaaagaaa ttattaaagc tggaaaaatc gcggatagca cgggcgcctc attctcttcc
      121 tccatcacaa aatgtctcgg gaatggtgtc tccatcaaat tttggaatga catctggttc
      181 ggttcggaac gatttagcac actttttcac agattataca tgcttgagac aaataaagat
      241 gcttcgatcg ctgaaagaat tacacatagc aatggatctt cagttggtaa ctggtgctgg
      301 acaaggcctc ctactggtcg ggcaacaaac gaaatcacgg aattaaacaa cattgtatct
      361 tccgttactt tatctgacaa acaagactcc tggaaataca atctagaccc cacaggaatt
      421 ttcaccacca aatctttgac acttctgatc aacaccccaa ggcttgggag taacgcttta
      481 agcttatcga ttccccgtaa caaactccta cctcaaaaag tatatatctt catatggaga
      541 gccattcaaa aaaagattcc ggttagatta gaaattgaca aaaggggcat tgatctcgat
      601 tccactttat gccctttatg cgaattgaat atagaaacca ccgaacatat cctcagttct
      661 tgccccaaaa cggcactcat atggaaactt atcctcgatt ggtgggccca agactattct
      721 ttaatctcca atcttaacga tgccatcatc aataaacaac cattcgctct cagcaatttc
      781 ggcttttcaa tatggcaagc aaccaaatgg attacttgtt atataatttg gaaacatagg
      841 aacttgaaag tattttccaa aaaaacgtgg tcccctggtt cgattatatc cgaaattcaa
      901 acacaaagtt atagttggat ttccaaaaga tcgcgcaaaa agaaatcaat cgagtggcat
      961 caatggctca ttaatccttc tttctttgtt gcggatactc cccaccgagt tgggtttggc
     1021 taa
//
LOCUS       XM_071831036             399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840789), mRNA.
ACCESSION   XM_071831036
VERSION     XM_071831036.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..399
                     /gene="LOC139840789"
                     /note="uncharacterized LOC139840789; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840789"
     CDS             1..399
                     /gene="LOC139840789"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687137.1"
                     /db_xref="GeneID:139840789"
                     /translation="MELIKTTKIQPERPDSWRWDGCNKVEVFVWRVLKKWLPVLVELD
                     KWGIDLHSVRCSICDNDIESVDHSLGTCKEVNDLWRKVLDWWGFMLESHDLALHNSTF
                     AELIHYYVLNSHDNPVMLESHDLALHCLIL"
     misc_feature    <70..234
                     /gene="LOC139840789"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggagctga tcaaaacaac aaagattcaa ccagagagac ctgattcgtg gagatgggat
       61 ggctgcaaca aagtagaagt atttgtttgg agagtattga aaaagtggtt accagtattg
      121 gtggaattgg ataaatgggg gattgatctt cactcggtga gatgttcgat ttgtgataat
      181 gacattgagt cggtggatca ttctcttggt acttgcaaag aggtgaatga tttatggcgt
      241 aaggtgctag attggtgggg gttcatgtta gagtctcatg atttagctct tcataattcc
      301 acatttgctg agttgatcca ttactatgtt ctcaattcac atgacaatcc agtcatgtta
      361 gagtctcatg atttagctct tcattgtctc attctctaa
//
LOCUS       XM_071831037            1179 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840790), mRNA.
ACCESSION   XM_071831037
VERSION     XM_071831037.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1179
                     /gene="LOC139840790"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840790"
     CDS             1..1179
                     /gene="LOC139840790"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687138.1"
                     /db_xref="GeneID:139840790"
                     /translation="MEQPPGFVSTRFPNHVCRLKKALYGLKQAPRAWFQRLSSFLVSL
                     GFTCSRADTSLFVFKKDSNILYLIFYVDDIILTGNNASMVRDFITRLNKEFLITDLGK
                     LNYFLGLEVSYLPSGIFLSQSKYAHDILARAQLLDTKPIATPLSTSTYLTSNGQPYTY
                     PTKYRSLVGALQYLTITRLDLSYAVNQVSQFLHAPTIDHFQAVKRILRYVKGTISYGL
                     SFLHASSPNILGYSDADWARCIETRRSTYGYSIFLAGNLVFWSAKKQPTVARSSCESE
                     YRAMANTAAEILWLAHLLRELHVLPPGRPTLLCDNRSAIFLSQNPISHKRAKHIDIDY
                     HFVRELVLSGKLHTKNVSTHLQLADIFTKSLPRPLFEDFRSKLRVGSPPSSLAGGGGG
                     "
     misc_feature    <1..435
                     /gene="LOC139840790"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    688..1104
                     /gene="LOC139840790"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(697..708,811..819,826..828,928..930,1006..1008,
                     1087..1089)
                     /gene="LOC139840790"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggagcaac ctccgggttt tgtgagcact cgctttccaa atcatgtttg tcggttaaaa
       61 aaggctctct atggtttgaa acaagcacct cgggcttggt ttcaacgatt aagctctttc
      121 cttgtaagtt tggggtttac gtgcagtcga gctgacactt ctttattcgt attcaagaag
      181 gattctaata ttctatatct tattttttat gttgacgata ttattcttac tggtaataat
      241 gcatctatgg ttcgagattt tatcacccgc ttaaacaagg aattccttat taccgatctt
      301 ggaaagctta actattttct tggacttgaa gtttcttatc ttccatcagg aatatttttg
      361 agtcaatcta agtatgctca tgacatactc gcgcgtgctc aactcttgga tacaaaacct
      421 atagctacac cgttatctac ttcaacttat cttacttcta acggacagcc ttacacttat
      481 cccactaagt atcgttcttt agttggtgca cttcagtatc ttacaatcac tcgtctcgat
      541 ctttcctacg cagtcaacca ggtaagccaa tttcttcatg ccccaactat tgatcacttt
      601 caggctgtca aacggatatt aagatatgtt aagggcacca tatcttatgg gttatcgttt
      661 cttcatgctt catctccaaa tattttgggc tattctgatg ctgattgggc tagatgcatc
      721 gagactcgtc gttctaccta tggttactcc atctttcttg ccggtaatct tgtcttttgg
      781 agtgccaaga aacaaccaac agtggcccga tctagttgtg aatctgaata ccgagccatg
      841 gcaaatactg ctgctgaaat tttgtggctt gctcatctac ttcgagagtt gcatgtatta
      901 cctcctggac gtcccacttt attatgtgat aatcgaagtg ctatctttct aagtcaaaat
      961 ccaatttctc ataagcgtgc taagcatatt gatattgatt atcatttcgt acgagaatta
     1021 gtgctttcag ggaaacttca cactaagaat gtctccactc atcttcaact tgccgatatc
     1081 ttcactaaaa gtcttcctcg tcctctattt gaagactttc gatccaagct tcgagttggt
     1141 tcacccccat cttcgcttgc gggggggggg ggggggtaa
//
LOCUS       XM_071831038             714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840793), mRNA.
ACCESSION   XM_071831038
VERSION     XM_071831038.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139840793"
                     /note="uncharacterized LOC139840793; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840793"
     CDS             1..714
                     /gene="LOC139840793"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687139.1"
                     /db_xref="GeneID:139840793"
                     /translation="MSGGVEPIALTSSKPSLNLHQNTTTTNLFSFQNLNAIALIIILA
                     SSGMVGVQDLSFVLLSFFYIFFFMSKLAFPPLSTTPDPPIFGAHTRLLIAYVSLGAII
                     GILLPVGYIVHGVLQGDKEGIKAAAPHVFLLASQIVMESVSFNGGYSLPIRVLVPVVY
                     NSMRMYAILDWVKSEIMKRNEMGNDGISDKRLVVGISLAVVNLGFWGFNLFGFLLPFY
                     LPKAFKKYYAFTDNDDKQS"
ORIGIN      
        1 atgtcaggtg gtgtagaacc catagctcta acaagctcaa aaccatcact taatcttcac
       61 caaaacacca caacaactaa cctcttttca tttcaaaacc tgaacgcaat cgcactcata
      121 atcatcctag cttcatcagg catggttggg gttcaagatc tttcatttgt tctcctttcc
      181 tttttctaca tcttcttctt catgtccaaa ctcgctttcc ctcccctctc caccaccccg
      241 gacccaccga tattcggggc ccacacccgt cttctaatcg cctacgtgtc actcggcgca
      301 atcatcggaa tcttactccc agttgggtac atagttcacg gcgttttaca aggtgataaa
      361 gaaggtataa aagcagctgc accacatgtg tttttattgg ctagtcaaat agttatggaa
      421 agtgttagct ttaatggtgg gtattcgtta cccattcggg tcttggttcc ggttgtttat
      481 aacagtatga gaatgtatgc gattttggat tgggttaaga gtgagattat gaaacgaaat
      541 gaaatgggta atgatgggat tagtgataaa aggttggttg tgggaattag tcttgctgta
      601 gttaatttgg ggttttgggg gtttaatctt tttgggtttc tgttgccttt ttatttgcct
      661 aaagctttta agaaatatta tgcttttact gataatgatg ataagcaatc ttaa
//
LOCUS       XM_071831039            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840794), mRNA.
ACCESSION   XM_071831039
VERSION     XM_071831039.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139840794"
                     /note="uncharacterized LOC139840794; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840794"
     CDS             1..1116
                     /gene="LOC139840794"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687140.1"
                     /db_xref="GeneID:139840794"
                     /translation="MLSFNIRGLGKNDKIKFNWFKNLIFREKPAVIALQETKCRKPPE
                     FWIEKIWGSDDYNYAVKNSSGLSGGILAVWDPNFFCANCVVERDSFIAIKGNWKCAGT
                     ELIIVNVYGPHTDDLKKKMWDDLRDVMSYDNAMWVILGDFNEVRSKSERKNTIFLEHR
                     AKRFNSFIKDSNLIDIPLGGRNYTRISTNGVEFSKLDRFLVSEIFLQQWPNTHAMVLN
                     KKHTDHCPIILKDGNVDFGPKPTKVFDEWLNHKEAPEIIKAAWTKEVKSSNPDCTFRD
                     KMKNVKTELHKWYSTSPGKLKAEIEELSEVVDDWEIRAESEDLSEAQLKEWMDSRDLL
                     HKKENTQLEMLKQKARVKWDLEGSENNKFFHSMIRRR"
     misc_feature    7..690
                     /gene="LOC139840794"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(13..15,106..108,328..330,421..423,427..429,589..591,
                     667..672)
                     /gene="LOC139840794"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(106..108,667..669)
                     /gene="LOC139840794"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(328..330,427..429,670..672)
                     /gene="LOC139840794"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgctttcat tcaatattag aggtttaggg aagaatgata aaatcaaatt taattggttc
       61 aaaaacttaa tttttcgtga aaaacctgct gtcattgctt tacaagaaac taaatgcaga
      121 aaacctcccg aattttggat cgaaaaaatt tggggtagcg acgattataa ctatgctgtt
      181 aaaaactcgt caggtctttc gggcgggatt cttgcggttt gggatcctaa ttttttttgt
      241 gctaactgtg ttgttgagcg tgactccttt attgcgataa aaggaaattg gaaatgtgca
      301 ggtacggaac tcattattgt caatgtttat ggacctcaca cggacgattt aaaaaagaaa
      361 atgtgggacg atctacgtga tgttatgtct tatgataacg caatgtgggt aatactaggt
      421 gatttcaatg aggtccgttc caaatctgag agaaaaaaca caattttcct ggaacatcga
      481 gccaaaagat ttaatagctt catcaaagac tccaacttaa tcgatattcc actcgggggc
      541 aggaactaca cgagaattag tacgaatggg gtggaattta gtaaactgga caggttcttg
      601 gtctcagaaa tttttttaca acaatggcca aacactcatg caatggttct aaacaaaaaa
      661 cacacggacc actgcccgat aatccttaaa gatggaaatg ttgactttgg tccaaaaccc
      721 accaaagtct ttgatgaatg gctaaatcat aaagaagcac ccgagataat taaagcggca
      781 tggacgaagg aagtaaagag ctcaaaccca gattgcactt ttcgcgataa aatgaaaaat
      841 gtcaaaacag aacttcacaa atggtattct acctcacctg gtaaactaaa agcagaaatc
      901 gaagaactat cagaagttgt tgatgattgg gaaattagag cagaatccga ggacctaagt
      961 gaagcacaat tgaaagagtg gatggattcc cgtgacttgc tgcacaagaa agaaaatact
     1021 caattggaaa tgttaaagca aaaagcacga gtcaagtggg acttagaggg tagcgagaac
     1081 aacaaattct ttcattccat gatacgtaga aggtag
//
LOCUS       XM_071831040             522 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR-RED IMPAIRED
            RESPONSE 1-like (LOC139840795), mRNA.
ACCESSION   XM_071831040
VERSION     XM_071831040.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..522
                     /gene="LOC139840795"
                     /note="protein FAR-RED IMPAIRED RESPONSE 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840795"
     CDS             1..522
                     /gene="LOC139840795"
                     /codon_start=1
                     /product="protein FAR-RED IMPAIRED RESPONSE 1-like"
                     /protein_id="XP_071687141.1"
                     /db_xref="GeneID:139840795"
                     /translation="MKYAEQLFVYHSSVSNIGPTKAYEVYSNMKGSEKNVHGTVTDFR
                     NWKRDLNVFINASDSRVLVNKMEQRKKYVPGFSFEYKLEKSQQHSIFSADEVAKCNYK
                     EFSDIISFDATYNLKFVPFTGIENHHRCVTTVAGLIRDETAESYTWLLKCFMKTFGKD
                     PNIIVTYQDKYVD"
     misc_feature    <61..>510
                     /gene="LOC139840795"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgaaatatg cagagcagtt gtttgtatac cattcgtcag tgtcaaatat tggtccaaca
       61 aaggcatacg aagtttatag caatatgaaa gggtctgaga aaaatgttca tgggactgta
      121 actgatttca gaaattggaa acgagatttg aatgttttta tcaatgcaag tgattctcgg
      181 gtgctcgtta acaaaatgga acaacggaag aaatatgttc ctggtttttc atttgagtac
      241 aagcttgaaa aaagtcaaca acattccatt ttctcggccg atgaagttgc aaaatgcaac
      301 tacaaggagt ttagtgacat tatctcattt gatgcaacgt acaacctgaa gtttgtacca
      361 tttactggca tagaaaacca ccataggtgt gtcactactg ttgcgggatt gatcagggat
      421 gaaacagccg agagttacac atggcttctt aaatgtttca tgaagacatt cgggaaagat
      481 ccaaacataa tagtgacata tcaggacaaa tatgttgatt ga
//
LOCUS       XM_071831041             456 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides remorin-like (LOC139840796),
            mRNA.
ACCESSION   XM_071831041
VERSION     XM_071831041.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..456
                     /gene="LOC139840796"
                     /note="remorin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139840796"
     CDS             1..456
                     /gene="LOC139840796"
                     /codon_start=1
                     /product="remorin-like"
                     /protein_id="XP_071687142.1"
                     /db_xref="GeneID:139840796"
                     /translation="MTSNYLIIMSESGEPCDQEKLAEGSAHRDAVLARVATEKKDALI
                     KAWEESERSKVENRAQKQLAAIGAWENSKKAELEAQLKKMEEKLEKKKARYTEKLKNK
                     IARLHKSAEEKRAITEAKRGEGLLKAEEFGVKCRVNGITPKKLMRWFSN"
     misc_feature    115..432
                     /gene="LOC139840796"
                     /note="Remorin, C-terminal region; Region: Remorin_C;
                     pfam03763"
                     /db_xref="CDD:427493"
ORIGIN      
        1 atgacttcta actatttgat tattatgtca gaatcaggag agccttgtga tcaagagaaa
       61 cttgctgagg ggtctgcaca cagagatgct gtacttgctc gcgttgcaac ggagaagaaa
      121 gatgcactca tcaaagcatg ggaagaaagt gaaagatcta aagtagagaa cagagcccaa
      181 aaacagctag ctgccattgg agcatgggag aacagcaaga aagcagaact ggaagctcaa
      241 ttaaaaaaaa tggaggagaa gctggagaaa aagaaggcta gatacacaga gaaattgaag
      301 aacaaaatag cgcgcctgca caagtcagca gaagaaaaaa gggcaattac agaagcaaaa
      361 cgcggggaag gtcttttaaa agccgaagaa tttggcgtta aatgtcgcgt taatggaatc
      421 accccaaaga aactaatgag atggttttca aactag
//
LOCUS       XM_071831042             354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative non-specific
            lipid-transfer protein 14 (LOC139840797), mRNA.
ACCESSION   XM_071831042
VERSION     XM_071831042.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..354
                     /gene="LOC139840797"
                     /note="putative non-specific lipid-transfer protein 14;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139840797"
     CDS             1..354
                     /gene="LOC139840797"
                     /codon_start=1
                     /product="putative non-specific lipid-transfer protein 14"
                     /protein_id="XP_071687143.1"
                     /db_xref="GeneID:139840797"
                     /translation="MNYLKIVTSVWLLVMVVLCAALKISATVDCATVTTLISTCSAFV
                     TYGTPDPYPGSPCCDAVASLNNLGDSEENRRSLCMCVMGVITTYNPNATAIATLPGFC
                     GVSLGFTIDPNTDCI"
     misc_feature    82..348
                     /gene="LOC139840797"
                     /note="Non-specific lipid-transfer protein type 1 (nsLTP1)
                     subfamily; Plant nsLTPs are small, soluble proteins that
                     facilitate the transfer of fatty acids, phospholipids,
                     glycolipids, and steroids between membranes. In addition
                     to lipid transport and assembly; Region: nsLTP1; cd01960"
                     /db_xref="CDD:238926"
     misc_feature    order(97..99,109..111,121..123,130..132,181..183,190..195,
                     220..222,229..231,238..243,250..252,283..285,292..297,
                     316..324,328..333)
                     /gene="LOC139840797"
                     /note="hydrophobic cavity [active]"
                     /db_xref="CDD:238926"
ORIGIN      
        1 atgaattatc ttaagatagt gaccagtgtg tggttactag tgatggtggt actttgtgcg
       61 gcattaaaaa tctcagcaac cgtagactgt gccactgtaa caaccctcat atcaacatgc
      121 tctgcatttg taacctatgg cacccctgat ccgtatccag ggtctccttg ttgtgatgca
      181 gtggctagtt taaataacct tggcgactca gaagaaaaca gacgatcatt atgtatgtgc
      241 gtgatgggtg ttattacgac ttacaatcca aatgccacag ccattgctac cctgcctggc
      301 ttctgtggcg tctctcttgg ctttaccatc gacccaaaca ccgattgcat ctag
//
LOCUS       XM_071831043            1512 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 (LOC139840798),
            mRNA.
ACCESSION   XM_071831043
VERSION     XM_071831043.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1512
                     /gene="LOC139840798"
                     /note="probable (S)-N-methylcoclaurine 3'-hydroxylase
                     isozyme 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 45 Proteins"
                     /db_xref="GeneID:139840798"
     CDS             1..1512
                     /gene="LOC139840798"
                     /codon_start=1
                     /product="probable (S)-N-methylcoclaurine 3'-hydroxylase
                     isozyme 2"
                     /protein_id="XP_071687144.1"
                     /db_xref="GeneID:139840798"
                     /translation="MDHISTFLNDNNLSPPLLILSTIIFLLFVFKHNKSAKNLPPGPP
                     KLPIIGNLLQMGDKPHVDTAKFAKKYGPLISVHLGNELVVVGSSPEAATAILKTQDRL
                     LSSRTVPAAFKQEGLLPHSLMWSECNQTWKSLRTLCRTELFSNKALDAQSTLKEKKVE
                     HLLGFLRKKQGQEIDIEDVVFTTLLNTLSSIVFGSDTLDFKGEQGSRDWFKESMHKII
                     AYGGRVIDFGSFFPVLERFDLHGTTKGSAKEFAKIFSYWDEMIEERRACVESSTWSSE
                     QAQSFLDRLLENKFSNNQIYQLVTELFVAGTNTTTSTVVWVMTELVKHSNVISKIQEE
                     IKREIHSEQIIISELSKLTYLQACIKETFRLHPPVPLLLPHKAAETCEVMNYTIPKNT
                     KIFVNLWAMGRDPKVWNEPLSFNPERFIDSKIDYKGQDFELLPFGSGRRICPGMPSGI
                     KSVELIIASLIREFDMTLPNNADASKLDMNEKFGIAMKRDNPLKLIFKQREVY"
     misc_feature    199..1488
                     /gene="LOC139840798"
                     /note="cytochrome P450 (CYP) superfamily; Region:
                     cytochrome_P450; cl41757"
                     /db_xref="CDD:477761"
     misc_feature    order(391..393,403..405,424..426,562..564,901..906,
                     913..918,925..930,937..939,1087..1089,1117..1119,
                     1123..1125,1192..1194,1303..1311,1321..1335,1342..1347)
                     /gene="LOC139840798"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410696"
     misc_feature    order(649..654,901..903,910..915,925..927,1111..1122)
                     /gene="LOC139840798"
                     /note="chemical substrate binding pocket [chemical
                     binding]; other site"
                     /db_xref="CDD:410696"
ORIGIN      
        1 atggatcata tctcaacttt tcttaatgat aataatctat cacctcctct tttaatttta
       61 tcgacaatca tcttcctttt attcgtcttc aaacacaata aaagcgctaa aaaccttcca
      121 cccggtccac caaagttgcc tatcatcgga aacttacttc aaatggggga caaacctcat
      181 gtcgacacag caaaattcgc caaaaaatac ggtcctctca tttctgtcca cttaggaaat
      241 gagctagttg tagtgggttc ttcaccagaa gcagctactg caattctcaa aactcaagat
      301 cgtcttcttt catctcgtac ggttcctgct gcatttaagc aagaaggctt actaccacac
      361 tccctcatgt ggtcggagtg caatcaaaca tggaaatcgt taagaacact ttgtcgaacg
      421 gaacttttct caaataaagc tttagacgca caatctacgt taaaagagaa aaaagttgaa
      481 cacttgttag gtttcttgcg taaaaagcaa ggacaagaga ttgacattga agatgtagtt
      541 ttcactacat tgttgaacac cttaagctcc attgttttcg gctctgatac gctagatttc
      601 aaaggtgaac aagggtcgcg ggattggttt aaagagtcta tgcataaaat tatcgcgtat
      661 ggaggtcgtg taatagattt tggttcgttt tttcccgttc tagaaagatt tgatcttcat
      721 ggaacaacaa aaggatccgc gaaagagttt gccaaaatat tttcgtattg ggacgaaatg
      781 attgaggaac gaagagcttg tgtcgaatct tcaacatggt cttcggaaca agctcaatcc
      841 ttcttggacc ggttgcttga aaataaattc tccaacaatc aaatctatca attggtcacg
      901 gaattatttg tagcgggaac aaatactaca acttccacgg tggtatgggt tatgactgaa
      961 cttgtgaagc attcaaacgt gatatcaaaa atacaagaag agataaaaag agaaatccat
     1021 tcagaacaaa tcatcatctc cgaattatct aaattaactt atcttcaagc ttgcatcaaa
     1081 gaaactttta gattacatcc accggtgcct cttttacttc ctcacaaagc agcagagact
     1141 tgtgaggtta tgaattacac aattccgaag aataccaaaa tatttgtcaa tctttgggca
     1201 atgggccgag atccaaaggt atggaacgag cctttatctt tcaaccctga aagatttatt
     1261 gactcgaaga tagattataa gggccaagac tttgagttac taccgtttgg atccgggagg
     1321 aggatatgcc cagggatgcc atcgggtatc aagagtgttg aactaataat cgcgtcttta
     1381 attcgcgaat tcgatatgac tcttcccaat aatgccgatg catcaaaact tgacatgaac
     1441 gaaaaattcg gaattgctat gaaaagggat aatcctttaa aactgatatt taaacaaaga
     1501 gaagtgtatt ag
//
LOCUS       XM_071831044            1776 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840799), mRNA.
ACCESSION   XM_071831044
VERSION     XM_071831044.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1776
                     /gene="LOC139840799"
                     /note="uncharacterized LOC139840799; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840799"
     CDS             1..1776
                     /gene="LOC139840799"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687145.1"
                     /db_xref="GeneID:139840799"
                     /translation="MTIDKWWTTIRHTFNPDFIKGIHAFIERCNNNLDSHGKCSCPCK
                     QYGNTVFLKPKHIKAHITRYGFEPSYTIWRHHGELPQPPEVHNTTDPLRNFLHDIQLE
                     EVPNFEEEGPNDDETMNDTAATALEDLIDSTQTELYPGSKLSSLEFLAKLTHIKVLNK
                     WTNTSFDQLLELLIQSHPPNNTIPKSFYETKKWMRKIGLGYQAIHACKNDCCLFYKEY
                     QDLENCPICKESRWKDERTTGKKVPNKVLRYFPITPRLKCLYSSRYTSKDMTWHATGR
                     CNEEGKMRHQVDGRAWKEIDKRYPDFAREPRNVRLGLAADGFNTFGNMNNPYSMWPVI
                     LTTYNTPPWICMKESSLMLTLLIPGPKSPGKDIDVYLRPLVDELKILWSEGVVTHDSV
                     TNTYFQMKAMLIWTINDYPARSSLSGWSGQGYKACPTCNEDTPAMRVKNKIVFVSHRP
                     NLESNHPYRESLEFNGKVNHTSKPRKFKVADIENQLTDLLPVGNPGKNHTNVGEKRKR
                     PPNCRHNWTKISIFREREYWKYLPLQHNLDVMHIEKNVLEAILGTLLMNDKSKDTHNA
                     RVDLKKLGIRKDLWLKPKTNGKKDG"
     misc_feature    19..234
                     /gene="LOC139840799"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    838..1458
                     /gene="LOC139840799"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atgacgattg ataagtggtg gactactata cgacatacat ttaatcctga ctttattaaa
       61 ggtattcatg catttattga gaggtgtaat aacaatttgg attcgcacgg taagtgtagt
      121 tgcccatgta aacagtatgg taatacggtt tttcttaaac ctaaacatat aaaagcccat
      181 ataactagat atgggtttga accctcttat accatatggc ggcatcacgg tgaactacca
      241 caaccacccg aagtacacaa cacaacggac cctctaagaa atttcttgca cgatattcag
      301 ttggaggaag ttcctaattt tgaggaggaa ggtccgaatg acgatgagac tatgaatgac
      361 acggccgcaa ctgctcttga ggatttaatt gactccaccc aaaccgagct atatcccggt
      421 agcaagttgt cctcattaga gtttttggcc aagttaacac acattaaggt cttgaacaaa
      481 tggacgaata cttcattcga ccaattgtta gaattactca tacaatcaca tcccccaaat
      541 aacacgattc cgaaatcatt ttacgaaact aagaagtgga tgagaaagat cggtttaggg
      601 tatcaagcga tacatgcttg taagaatgat tgttgtttgt tttataaaga ataccaggat
      661 ttggaaaact gtccaatatg taaagagagt agatggaaag atgaacgcac aacggggaaa
      721 aaagttccta ataaagtttt gcgttatttt ccaataactc caagactaaa atgtttgtac
      781 agttcaagat acacttcaaa ggatatgact tggcatgcta ctgggcggtg caatgaagag
      841 ggtaagatgc gtcatcaggt agatggtcga gcttggaaag aaattgacaa aagatatccg
      901 gattttgcac gtgaacccag aaatgttcga ctaggtttgg ctgctgatgg tttcaataca
      961 ttcggcaaca tgaataatcc ttacagcatg tggccagtca tattgacaac gtacaatacg
     1021 ccgccgtgga tatgtatgaa agaaagttct ctcatgttga ctctgttaat tcctggtcct
     1081 aaatcacctg gaaaagatat tgatgtttac ttgaggcctt tagttgatga actgaagatt
     1141 ttatggtccg aaggggttgt tacacatgac tcagttacaa acacgtattt tcaaatgaaa
     1201 gcaatgctta tttggaccat aaacgattat cctgcccgta gtagtttgtc cggttggagt
     1261 ggccaaggct ataaagcatg ccctacatgt aacgaggaca ctcctgctat gcgtgtgaaa
     1321 aacaaaattg tttttgtcag tcacagaccg aaccttgaat cgaatcaccc atacagagaa
     1381 agcttagaat tcaatggtaa ggttaatcat acctctaaac ctagaaagtt caaagtagct
     1441 gatatcgaaa accaacttac agatttgtta ccagttggta atcccggtaa aaatcataca
     1501 aatgttggtg aaaaaagaaa acgtccccct aattgtcgtc acaactggac taaaatttct
     1561 atttttcggg aacgtgagta ttggaaatat cttccactgc aacacaactt agatgtcatg
     1621 catattgaaa agaatgtgtt ggaggctatt ttgggtacct tattaatgaa tgacaagtcc
     1681 aaagacactc acaatgcacg agttgacttg aaaaaattgg gtattcgaaa agatttgtgg
     1741 ctcaaaccta aaaccaatgg taaaaaagat ggctaa
//
LOCUS       XM_071831045             822 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840800), mRNA.
ACCESSION   XM_071831045
VERSION     XM_071831045.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..822
                     /gene="LOC139840800"
                     /note="uncharacterized LOC139840800; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840800"
     CDS             1..822
                     /gene="LOC139840800"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687146.1"
                     /db_xref="GeneID:139840800"
                     /translation="MVVVFQKRKNALWVKIIRSIYGKGGGLDTNITCRNISGRTIWKE
                     IIKAGTIADDTRASFSTSITKQLENGESIKFWKDIWCGSERFCTLFHRIFMLGSNKDA
                     HVADRISHNGTSTCGIWSWIRSPSGRALNELTEINNIVSSIKLTDKPDAWKYDLDPSG
                     IYTTKSLARKIDCLKLGNHATNISVPRNKYIPQKVNIFAWRVAQKKIPVRIELDKRGI
                     DLNTVLCLICNSDIESTDHTMVHCPKIAQIWFLTLNWWNQPTSIISNLEDAISNQ"
     misc_feature    <562..744
                     /gene="LOC139840800"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtggtgg tgtttcaaaa acgaaaaaat gctctttggg ttaaaattat cagaagtatt
       61 tatgggaagg ggggcgggtt agatactaac attacatgca ggaacatttc agggcgtact
      121 atttggaaag agatcattaa agcaggaaca attgcggacg atacgagagc ttcgttttct
      181 acatccataa ccaaacaact tgaaaatggt gaatctataa aattttggaa ggacatttgg
      241 tgcggttccg aacgtttttg cactttattt catagaattt tcatgcttgg ctctaataaa
      301 gacgcacatg tagcggaccg aatctcccac aatggcacct caacttgcgg tatctggtct
      361 tggattcgtt cacctagcgg acgggcactt aacgaactaa ccgaaatcaa taatattgtc
      421 tcttccatca agctgaccga caaacccgat gcttggaagt atgatcttga cccatccggt
      481 atctacacta ctaaatcatt agcacgaaaa atcgattgtc taaaacttgg taatcatgct
      541 acaaacattt cggtccctcg caataaatat attccgcaaa aggttaacat attcgcttgg
      601 agagttgccc aaaagaaaat accggtaaga atagaactag acaaaagggg cattgatctt
      661 aataccgtcc tttgtctaat ttgcaactcg gacatcgaat ctaccgatca caccatggtt
      721 cattgtccaa aaatagcaca aatttggttt cttactctaa attggtggaa ccaacctacc
      781 tccataattt ctaatcttga agacgccatt agcaaccaat aa
//
LOCUS       XM_071831046             840 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840801), mRNA.
ACCESSION   XM_071831046
VERSION     XM_071831046.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..840
                     /gene="LOC139840801"
                     /note="uncharacterized LOC139840801; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840801"
     CDS             1..840
                     /gene="LOC139840801"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687147.1"
                     /db_xref="GeneID:139840801"
                     /translation="MKIVSFNIRGLGTRDQDKLNWFKKLCYREKPNFIAIQEIKSNKS
                     PEKWIEQIWGNADFRVSIKNSTGNSGGILTIWDPNFFNANQVVEKESFIAVKGRWKHA
                     GSELIIVNVYGPHTDEAKKKMWCELTELMNYDDAMWVLCGDFNEVRHSDDGRKFSKLD
                     RFLISDNFKLVWPNINALVLDKKHSDHCPILLKDNDIDFGPKPVKVFDVWLNNKEAKQ
                     IIENSWSIKVNRQRPDCVIRDKMKHVKQELRKHFAISHCKLKLEIDELNNVVKNWELT
                     AEM"
     misc_feature    10..561
                     /gene="LOC139840801"
                     /note="Endonuclease/Exonuclease/phosphatase family;
                     Region: Exo_endo_phos; pfam03372"
                     /db_xref="CDD:460902"
ORIGIN      
        1 atgaagatag tatcatttaa tattagaggt ttgggcacaa gagaccaaga taaattaaat
       61 tggtttaaaa aactttgtta tcgagaaaaa cccaatttta ttgcaatcca agaaataaag
      121 agtaacaaat cacctgaaaa atggattgaa caaatatggg ggaatgctga ttttcgggtt
      181 tcgattaaaa actcgacagg aaactcgggt gggatattaa ctatttggga tccaaacttt
      241 tttaatgcta accaagtggt tgaaaaagaa tcctttattg cggtaaaagg aagatggaaa
      301 catgcaggta gtgagcttat tattgtaaat gtctatggac ctcatacaga tgaagcaaaa
      361 aagaaaatgt ggtgtgaact aactgaacta atgaattatg atgatgctat gtgggtactc
      421 tgcggtgatt ttaatgaggt aagacatagt gatgatggcc gcaaattcag caaacttgat
      481 aggtttttaa tctccgataa tttcaagctc gtatggccga atataaatgc cttggtctta
      541 gataagaagc attccgatca ttgccccatt ttgcttaaag ataatgatat tgattttggt
      601 ccgaaaccgg ttaaagtgtt tgatgtatgg ctaaacaaca aagaagcaaa acagattatt
      661 gagaactcat ggagcatcaa ggtaaataga caaagacctg attgtgtaat acgggataaa
      721 atgaagcatg tcaaacaaga attgcggaaa cacttcgcta tttcacattg caagctaaag
      781 ctggaaattg atgagctgaa taatgtagtc aagaattggg aactgacagc tgaaatgtga
//
LOCUS       XM_071831047            2025 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At5g66520-like (LOC139840803), mRNA.
ACCESSION   XM_071831047
VERSION     XM_071831047.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2025
                     /gene="LOC139840803"
                     /note="pentatricopeptide repeat-containing protein
                     At5g66520-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840803"
     CDS             1..1647
                     /gene="LOC139840803"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At5g66520-like"
                     /protein_id="XP_071687148.1"
                     /db_xref="GeneID:139840803"
                     /translation="MDYRKHLKSLAFLIDNCKNMRNIKQIHSQIITSPYLSKSDHIFL
                     ISRLIFFCTLSSSGSLSYASRVFRVTDDPNLFIYNAMIRAYSSNPSNALEKPHSLALY
                     KQMLLNYIVPDCITIPFLLKECVNRLDFIVGQSVHAHSVKFGVQDNVYVRNSMIGFYT
                     GFGVLTCARKVFDEMPERDVVSWNSIIVGCLRCGEFDMAFDLFHKMNNRNTITWNSVI
                     TGMVQGGRPKEAVRLFDQMLFLKEEEKVYPDKITLASVISACASLGWLDHGKWVHSYI
                     LRNGIECDVVINTSMVDMYGKCGNVGMAKRVFMGSAKKDVLAWTSMISVYALHGYGQE
                     VFDLFDKMVGCGLQPNTVTFGALLTACSHLGLIDTGRWYFNLMKNVYSIEPTVQHYAC
                     MVDILGRGGLFDEVERLIDCMPMDPDVYVWGALLGACQMHGNIELGEKVAKRLINLDP
                     LNHAFYVTLCDIQAKAGKFDELEDTRARMDEIGLKKDTPGSSMIEVDGINYEFSVKGS
                     CDVMMDEIKSLLYGLSKEMNVYHDTSEPINNVFVHAQLSS"
     misc_feature    <193..1581
                     /gene="LOC139840803"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    229..324
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    451..534
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    538..627
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    637..732
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    748..837
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    952..1035
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1051..1143
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1159..1239
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1255..1344
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1357..1443
                     /gene="LOC139840803"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atggattatc gtaaacattt gaaatcatta gcctttttga ttgacaattg caagaatatg
       61 agaaacatta aacaaattca ttctcaaatc ataacatcac cctacttatc aaaatcagat
      121 cacattttcc tcatttcacg tctcattttc ttctgcacac tttcatcatc tgggtcactc
      181 agttacgctt ctcgtgtttt tcgagtaacc gatgacccga atctgttcat atacaacgcc
      241 atgataagag cgtattctag taatccaagt aacgcgcttg aaaaaccaca ttcattggct
      301 ttgtacaagc aaatgttgtt gaattacatc gtgccagatt gtattactat tcccttttta
      361 ttgaaggaat gtgttaatag acttgatttt attgtgggtc aaagtgttca tgctcattct
      421 gttaagtttg gcgttcaaga taatgtatac gttcgaaatt cgatgattgg tttttatact
      481 ggttttgggg tgttgacatg tgcacggaag gtgtttgatg aaatgcctga acgggatgtt
      541 gtttcttgga attcgattat tgttgggtgt ttaagatgcg gggagtttga tatggcgttt
      601 gatctgtttc ataagatgaa taacagaaat actattactt ggaactcggt aattactgga
      661 atggttcaag gcggtaggcc aaaagaggct gttcgattat ttgatcaaat gcttttttta
      721 aaggaggaag aaaaggttta ccctgataag atcacgttag ctagtgtaat ttcggcttgt
      781 gcatcgttag ggtggctcga tcatggtaag tgggtgcaca gttacatttt gagaaacggg
      841 atagagtgtg acgtcgtgat taacacatcg atggttgaca tgtatggaaa atgtggtaat
      901 gtgggtatgg cgaaaagggt ttttatgggt agtgcaaaaa aagacgtttt ggcttggaca
      961 tcaatgatct cggtgtatgc tcttcatggt tatggtcaag aggtgtttga cctttttgac
     1021 aagatggttg ggtgtgggct gcaacctaat acagtaactt ttggtgcatt gttaacagcg
     1081 tgtagtcact tagggttaat agatacgggt cgttggtatt tcaatttaat gaaaaatgtt
     1141 tattcgattg agcccacggt tcaacattat gcttgtatgg ttgacattct tggtcgagga
     1201 ggactttttg atgaggttga aaggcttatt gattgtatgc cgatggatcc agatgtttat
     1261 gtgtggggtg cactactggg ggcgtgtcaa atgcatggga atatagagct tggagaaaaa
     1321 gtggctaaac gtttgattaa tttggaccct ttaaatcatg ctttttatgt cacattatgt
     1381 gatatacaag ctaaagctgg taaatttgat gagttggagg atacaagggc tcgtatggat
     1441 gaaatagggc ttaagaagga tacaccaggc agtagcatga ttgaagttga tggaatcaat
     1501 tatgagtttt cggtaaaagg atcatgtgat gtcatgatgg atgagattaa gagtcttttg
     1561 tatgggttaa gtaaagagat gaatgtatac catgatacat cagagccaat aaataatgta
     1621 tttgtgcatg ctcaattgtc aagttaatga caaaaaatga tatatccagt ggtagaacta
     1681 gaaaaaaaat tcaccagggc gaattttttt aatctggagg tgaaatttta tttaactggg
     1741 ggcgaaaaat tttcaccatt taggtcatgg gcttttaggt tggggcaaaa ttgaaggctt
     1801 ttgggcaaaa tatgcagact tttgggggca aaatcaaatt ttaagcttga aaatttcaaa
     1861 tccaccagaa gagatcaaaa aatccaaaat tataacctga aaatttcaaa tctactgggg
     1921 gcggtgcccc tgcccctacg tagtttcgcc cgtgtatcca ggtaataggt aataggtaac
     1981 gcgcagttct cttcggatgg ttcgaaggat cgaactttat gacaa
//
LOCUS       XM_071831049            1010 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor TFIID subunit 15b-like (LOC139840804), mRNA.
ACCESSION   XM_071831049
VERSION     XM_071831049.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1010
                     /gene="LOC139840804"
                     /note="transcription initiation factor TFIID subunit
                     15b-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon."
                     /db_xref="GeneID:139840804"
     CDS             1..828
                     /gene="LOC139840804"
                     /codon_start=1
                     /product="transcription initiation factor TFIID subunit
                     15b-like"
                     /protein_id="XP_071687150.1"
                     /db_xref="GeneID:139840804"
                     /translation="MPGYGHEGDGSAPPPVGGGYAGTGGGYGSSGGGGYGSSGGGGGG
                     GGYGSRGGAREGGSGGGYGGGGGYQGGGDQGRIGGGGGREGDWPCPNPDQGSQPQSQG
                     GYGGRPKSQGGSGGALAEAPAKVKKCHETCDKSCDNARIYISNLPPDVTVDELRALFG
                     GLGQIGRIKQERSYNDTWPYDITIYTDEHGKNKGDAVLVFENPYIAHAAGGFYNNHEL
                     RGHIISVEMAEKSPPRPPPPAQGGGRIGGYGGGGGRRDNYRDPQDRIYYSGNWPRPY"
     misc_feature    421..681
                     /gene="LOC139840804"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
ORIGIN      
        1 atgcctggat acggtcatga aggagatgga tctgctccac cgcccgtcgg cggtggatac
       61 gccggaactg gcggtggata cggtagcagc ggtggtggtg gatacggtag cagtggtggt
      121 ggtggcggcg gcggcggtta cggtagtcgt ggtggtgcta gagaaggagg cagtggcggt
      181 ggatacgggg gtggaggtgg atatcaaggt ggtggagatc aagggcgcat tggcggaggt
      241 ggtggtagag aaggagactg gccgtgccct aatccagatc aaggtagtca accacagagt
      301 caaggtggtt atggtggtcg accaaagagt caaggtggtt ctggtggtgc tcttgctgaa
      361 gcacctgcaa aggttaagaa gtgtcatgaa acttgtgata aatcctgtga caatgcacgt
      421 atctacattt cgaatttgcc tccagatgtg actgttgatg aattgagagc gctatttgga
      481 ggccttggac agattggaag aattaagcag gagcgaagct ataatgacac gtggccttat
      541 gacattacga tttacaccga tgaacacgga aaaaacaaag gagatgctgt gttggtcttt
      601 gagaatcctt atattgcaca tgctgctggc ggattttaca acaatcatga gctgagaggt
      661 cacataatta gcgttgaaat ggctgagaaa tctcctccaa ggcctcctcc tcctgcgcaa
      721 ggtggtggaa gaattggtgg ctacggtggt ggtggtggac gcagagacaa ctacagagat
      781 cctcaagata ggatttatta cagcggaaac tggcctcgtc cgtattgatt ttcacctgag
      841 caaaatgtaa ttagtaaaac tgtgaacaaa agagaagtgt ttattgtaat cgattgcagg
      901 gggattgttc ccttactagg agattaagag gtaggttatc tacttagacc acttttaatg
      961 gggcatcaaa aatttccctc acatgatgtg gaaatctagg tggcagagct
//
LOCUS       XM_071831050             693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 21 kDa protein-like
            (LOC139840805), mRNA.
ACCESSION   XM_071831050
VERSION     XM_071831050.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..693
                     /gene="LOC139840805"
                     /note="21 kDa protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840805"
     CDS             1..693
                     /gene="LOC139840805"
                     /codon_start=1
                     /product="21 kDa protein-like"
                     /protein_id="XP_071687151.1"
                     /db_xref="GeneID:139840805"
                     /translation="MNIHILFPISLEYILHDIHKLQLILQNDNFLAQDMASSNSFNFV
                     AQNIVLILLLFSSCITFISADENTNVEFVRSSCNLTTYPTLCFNSLSTKANAIQSSPK
                     LLVQTALSVTLDTTKSTSSSIVKLSKVHNTTQMEVSALKDCIEMLSNSADELKRSLDE
                     MKHPGSEDHALVMSDIQTWVSAAITDEDTCTDGFVDDPKMINVVGGKIVNVAHLISNA
                     LALINNYASLPE"
     misc_feature    223..681
                     /gene="LOC139840805"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; Region: PMEI-like_3;
                     cd15798"
                     /db_xref="CDD:275442"
     misc_feature    order(433..438,445..447,457..459,529..531,565..567,
                     667..669)
                     /gene="LOC139840805"
                     /note="putative heterodimer interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:275442"
ORIGIN      
        1 atgaatatcc acattctgtt tcctataagt ttggagtata ttttgcatga tattcataaa
       61 ctacaactca tacttcaaaa cgacaacttt cttgcacaag atatggcaag ctcaaattcc
      121 ttcaactttg tggcacaaaa tattgtccta atattacttc tcttcagttc ctgcatcact
      181 ttcatctctg ccgacgaaaa cacaaacgtt gaattcgtaa gatcatcatg taatttgaca
      241 acttatccta cactatgctt taactcactc tcaactaaag caaatgctat ccaatcaagt
      301 cctaagttac tagtccaaac cgctctatca gtcacacttg acacgacaaa atccacctcg
      361 tcttcaattg ttaaattgtc aaaagttcat aacacgactc aaatggaggt ttctgctttg
      421 aaagactgca ttgaaatgct tagtaattct gcagacgaat tgaaaagatc acttgatgag
      481 atgaagcatc cgggttcaga agatcacgcg ttagtgatga gcgacataca aacatgggtc
      541 agtgcagcca taacggatga agatacatgt actgatgggt ttgtggatga cccaaagatg
      601 ataaatgtgg taggcggaaa gattgtaaat gttgcacact taatcagcaa tgctttggct
      661 ttgatcaaca attacgcttc tctacccgag taa
//
LOCUS       XM_071831051            2546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate--tRNA ligase,
            cytoplasmic-like (LOC139840807), mRNA.
ACCESSION   XM_071831051
VERSION     XM_071831051.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2546
                     /gene="LOC139840807"
                     /note="glutamate--tRNA ligase, cytoplasmic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139840807"
     CDS             181..2346
                     /gene="LOC139840807"
                     /codon_start=1
                     /product="glutamate--tRNA ligase, cytoplasmic-like"
                     /protein_id="XP_071687152.1"
                     /db_xref="GeneID:139840807"
                     /translation="MMELKLLIASDGTAPLSVLAVARLAGVSLAVEPTNEPASQPVLV
                     LTDGIKIRGTNVVIRYIGRTSTSIPDLYQRDALETAQIDEWLEYAPIFSSGSEYEGAC
                     KYVDEYLLHRTFLVGHKLSVADIVVWSYLAVAGKRWESLLKSTKYQNLVRWYTSISTD
                     HAAILDELAASYTKKKETAKPVSTKTKPSENQTVNETVRASNRPEVDLPDAEMGKVCL
                     RFAPEPSGYLHIGHSKAALLNQYFAQKYNGKVIIRFDDTNPAKESNEFVDNLLIDIKT
                     LGINYEKVTFTSDYFEKLMAMAEKLIKEEKAYIDDTPREKMQQERMDGIESACRKNTV
                     DDNMKLWKEMILGSERGLKCCLRGKLDMQDPNKSLRDPVYYRCNPMPHHRIGSKYKIY
                     PTYDFACPFVDSIEGITHALRSSEYHDRNAQYFRIQEDMGLRKVNIYEFSRLNMVYTL
                     LSKRKLLWFVQNGLVDGWDDARFPTVQGIVRRGLQIEALIQFILEQGASKNLNLMEWD
                     KLWNINKKIIDPVCPRHTAILEDQRVLLTLLDGPETPFVRIVPKHKKYADAGEKATTF
                     TKRIWLEQADAKVISPNEEITLMDWGNAIVKEIKKDENGNVTELIGVLHLEGSVKTTK
                     LKLTWLPEINELVPLSLVEFSYLIRKKKVEEDEDFVDVLNENTKKEAAAVGDSNMRNL
                     KRGDIIQLERKGYFRCDVPFIRPSKQIVLYAIPDGRQTT"
     misc_feature    184..2337
                     /gene="LOC139840807"
                     /note="glutamate-tRNA ligase; Region: PLN02907"
                     /db_xref="CDD:215492"
     polyA_site      2546
                     /gene="LOC139840807"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttaaaaaac gcagtcattt ttaaacctaa aaccctactc atcttctcct atttgcagat
       61 ctaagccaat acccttcacc ggacaaatcg ccgccgctgc tgcccgctaa ccaccgttgt
      121 ttctgacctg caggtttacg ttgaatctga atcgaatttg ttctcaaagg ttcattgtta
      181 atgatggaat tgaagctact aattgcttca gatgggacgg ctcctctgtc tgttcttgcc
      241 gtggctcgtc ttgcaggagt ttctcttgct gtcgagccga cgaatgagcc agcctcgcag
      301 cctgttcttg tcttaaccga tgggatcaag attcgtggaa caaatgtagt tattcgatac
      361 attggtcgta catcaacaag tattcccgat ctgtaccagc gagatgctct tgaaactgcg
      421 cagattgatg agtggctcga gtatgcccct atcttttcgt ctggttctga atatgagggg
      481 gcatgtaagt acgttgatga atatttgttg caccgcactt tcttggttgg tcataagtta
      541 tctgttgccg atatagttgt ctggtcatat cttgcagtgg ctggtaagag atgggaaagc
      601 ttattgaagt caacaaagta tcaaaacttg gtacgatggt acacctcgat ctctaccgat
      661 catgctgcta ttttagatga actagctgca tcatatacaa agaaaaaaga aaccgcaaag
      721 cctgtatcta caaaaacaaa accaagcgaa aatcaaaccg tgaatgaaac tgtgagagct
      781 tcaaatcgac ccgaagtaga tcttcccgat gcagagatgg gcaaagtttg cttgcgtttt
      841 gcccctgaac caagtggtta tttacacatt ggccactcaa aagccgcgtt gctcaatcaa
      901 tactttgccc aaaagtacaa cgggaaagtt atcatccgct ttgacgatac gaatcccgcc
      961 aaagaaagca atgaattcgt tgataatctt ttgatcgaca tcaagacttt aggcattaac
     1021 tatgaaaagg tgacgtttac atctgactat ttcgagaagc taatggccat ggcagaaaag
     1081 ttgataaaag aagaaaaagc ttatattgat gataccccac gtgagaaaat gcagcaagaa
     1141 agaatggatg gtattgaatc cgcttgtcga aaaaacaccg ttgatgacaa catgaaatta
     1201 tggaaagaaa tgatattggg atccgaaaga ggactaaaat gttgcttacg tggcaaattg
     1261 gatatgcaag atcctaacaa gtcacttcga gaccctgtat actaccgttg taacccaatg
     1321 ccgcatcata gaatcgggtc gaagtacaaa atttacccaa cgtatgattt tgcgtgcccg
     1381 tttgttgatt ctattgaagg tattactcac gcgcttcgat ctagtgagta ccatgatcga
     1441 aatgctcagt attttcgaat tcaagaggat atggggctta ggaaggttaa tatttatgag
     1501 tttagtcggt taaatatggt gtatacgctt cttagcaaac gtaagctgct ttggtttgtt
     1561 cagaatgggt tagttgatgg gtgggatgat gctcgtttcc caactgttca aggaattgtg
     1621 cgtagaggtc tacaaattga ggcattgatt caattcatac tcgaacaagg ggcatccaag
     1681 aatttgaatc ttatggaatg ggataaactc tggaacatca ataaaaagat aatcgatcct
     1741 gtttgcccta gacatacagc aattctcgaa gaccagcgtg tgttgttgac tttgttggat
     1801 gggcctgaga ctccgtttgt acggatcgtt ccaaagcata agaagtacgc agatgctggg
     1861 gaaaaggcta caacttttac aaaaaggata tggttagaac aagctgatgc taaggtgata
     1921 tcaccaaatg aggagattac gttaatggat tggggaaatg cgattgttaa agagatcaag
     1981 aaggatgaaa atggaaacgt aactgaatta attggtgttc tgcatcttga aggatctgtt
     2041 aagaccacga agctgaaact tacatggtta cctgagatta atgaacttgt cccgttaagt
     2101 ctagttgagt tcagttacct aatcaggaaa aagaaggtag aggaggatga ggattttgtg
     2161 gacgtgctga atgaaaatac taagaaagag gcggcagcag ttggggattc aaatatgaga
     2221 aatttgaaga gaggagacat aattcaactc gagagaaaag gttacttcag atgtgatgtt
     2281 ccttttatca gaccatccaa acaaatcgta ctctatgcta tcccagatgg caggcaaacc
     2341 acctaaacaa acaaactact tctcatccac atccacatct atgatgattt tgaacccttt
     2401 tcatgtgcta cagttcggtt gtttaatgca acatggctac aggtaacgtg ttagtaaaaa
     2461 ggattctgaa actacttttg attctgatgt tttatctatt gatatgagac tagacaatgt
     2521 tattgtagtt ttgcaaattt ggtcta
//
LOCUS       XM_071831053             558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At5g41720-like
            (LOC139840808), mRNA.
ACCESSION   XM_071831053
VERSION     XM_071831053.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..558
                     /gene="LOC139840808"
                     /note="F-box protein At5g41720-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840808"
     CDS             1..558
                     /gene="LOC139840808"
                     /codon_start=1
                     /product="F-box protein At5g41720-like"
                     /protein_id="XP_071687154.1"
                     /db_xref="GeneID:139840808"
                     /translation="MDSILFCSDDMKVEILSRTSLKTLYTLRCTSKEICSLTYSSYFW
                     DLYKQRNDIVSGFLIQRWGTIPKFAPARDSKTLDLSFLPHGCDILASSEQGIVVFQRL
                     RYGTLRVSMDYYVCKPSTKQVLQLPNPKTIPLCNVKSVAIVLMGSNPLHYKIIGLSED
                     LDYRSWKTKSFSPLISNFFTATSSP"
ORIGIN      
        1 atggattcca tcttattttg tagcgacgat atgaaggtcg agattctttc tcgaacatcg
       61 ttgaagacac tatacactct tcgttgtaca agcaaagaaa tttgttcgct aacatatagc
      121 tcgtattttt gggacttata caagcaaaga aacgatatcg tatctggttt tttgatacaa
      181 aggtggggta caatcccaaa atttgcacca gctcgtgact caaaaactct ggatcttagt
      241 tttctgccac atggctgtga catcttggca tcttcagagc aaggaattgt tgtcttccag
      301 cgtctaagat atgggacact gagggtgagt atggattact acgtttgtaa accttctact
      361 aaacaggttt tgcaattacc gaatccgaaa accattccac tctgtaatgt taaatcagtt
      421 gctatcgtct tgatgggttc taatccattg cattacaaga tcattggatt gtctgaagat
      481 ttagattatc gcagctggaa aacaaaatca ttttcacctt tgatatcgaa cttctttact
      541 gctacttcat ctccgtaa
//
LOCUS       XM_071831054             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840809), mRNA.
ACCESSION   XM_071831054
VERSION     XM_071831054.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139840809"
                     /note="uncharacterized LOC139840809; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840809"
     CDS             1..606
                     /gene="LOC139840809"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687155.1"
                     /db_xref="GeneID:139840809"
                     /translation="MASYLLSYDSDSEDELIIALIQDLEDEDEDDEVESERVSRSRIY
                     IPRNREEAGENLWKDYFSDTPVFPSYKFKRHFRMRIELFLRISQGISNFDHDISEHFR
                     FFKERFDAIGRLTFTILQKMTSDLRQLAYGTAADMFDEYLKISEQTSILCFDNFCKCI
                     ITLYKERYMRSPYAYDVQRLYSKHEEKHGFKGMLGSIDCMH"
ORIGIN      
        1 atggcatcgt atttacttag ttacgattct gattcggaag acgagcttat tattgcacta
       61 atacaagatt tagaagatga agatgaagat gacgaagtcg aatccgagcg tgtttcaaga
      121 tcccgaattt atattccaag aaatcgtgaa gaagccggag aaaacttatg gaaggattat
      181 tttagtgaca caccagtgtt tccgtcatat aaatttaaaa ggcattttcg tatgcgcatt
      241 gaactatttc tccgaatatc gcaaggtatt tctaatttcg atcatgatat ttccgagcat
      301 tttagatttt ttaaggaacg tttcgatgct atcggtcggc tgacttttac aatattgcaa
      361 aaaatgactt cggatctacg ccaattggcg tatggaactg ccgccgatat gtttgatgaa
      421 tatttaaaaa taagtgagca aacctcaata ctttgttttg ataacttttg taaatgtatt
      481 attacattat acaaagaacg ttacatgaga tctccctatg catacgatgt tcaacgatta
      541 tatagtaaac atgaggagaa acatggtttt aagggtatgc tcgggagtat tgattgtatg
      601 cattga
//
LOCUS       XM_071831055            1935 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840810), mRNA.
ACCESSION   XM_071831055
VERSION     XM_071831055.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1935
                     /gene="LOC139840810"
                     /note="uncharacterized LOC139840810; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840810"
     CDS             1..1935
                     /gene="LOC139840810"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687156.1"
                     /db_xref="GeneID:139840810"
                     /translation="MLHPLPAVLTTPLTLGAYDGTTDLEDFLQQFEHAVKTQHWDSSR
                     ACHMFPGQLQAVAREWFAKLPALSISSYTDLRTKFVQHFQNFKRTELTHLDAHSIKIR
                     SHESLMNFTSHFTAECQKIPDLPESQQISAYIMGICQTRHLSLVKSMRRKLSKTYVEA
                     VKMVKDYVRSEEFVDDAVGDHSTTDRSDKDDKGNNKGNTGNKYKGSGSSGHRGYGRSS
                     HKSDYRNSYRPYERYAPKRLSAEEESLVKSLSKTPKEILATEEISKDFTPPKPMQPRF
                     AVDKSKWCIFHEDKGHDVDDCRELKNVIVERLKLEELDHLKPSSVKVPGTKKFAWQRG
                     KKKAPEKHIHMVQMWHVSHVRKVEVLEEWECAPITFPDFWRVCPTDLPITITATVGRC
                     KVSRIYVDTESAVDVLYEHCFLQLPQDVQDKLKPPLHPVAGFTGEMTWPLGRVSIDVT
                     LEENMKRRTVALNFVVVRSQSKYNIIMGREALCEFGAIVSTVHGMMKFPTPLGVATIF
                     SDRVPIVGQVEQPLHQTAPIEQGGSVIINHSFPEKTIQIGHTLSDAMKSALCELLVNN
                     ADVFAWQESDMTGVPRTIAEHRLNANPSMIPVRQKKRGMALERSIFLRNEVEKLVQAN
                     ILREVKYQTWVANLVLVRKK"
     misc_feature    139..411
                     /gene="LOC139840810"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1195..1449
                     /gene="LOC139840810"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1198..1200,1204..1206,1210..1212,1291..1299,
                     1426..1428)
                     /gene="LOC139840810"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    1198..1206
                     /gene="LOC139840810"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    1198..1200
                     /gene="LOC139840810"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(1291..1302,1312..1323)
                     /gene="LOC139840810"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgttacatc cgttgcccgc cgtccttact actcccctca cgctaggggc atatgacggc
       61 accacggatc tggaggactt cttgcagcaa ttcgaacatg ctgtcaagac gcagcattgg
      121 gatagctcga gggcgtgcca catgttcccg gggcagctcc aagccgtcgc gagagagtgg
      181 tttgccaaat tacctgcctt gagcatatcc agctatacgg acctcagaac taagtttgtg
      241 cagcattttc agaactttaa acgcaccgaa ctgacccacc tagatgcgca cagcatcaag
      301 atcaggtcgc atgaatccct aatgaatttt acttcccact tcacagcgga atgccaaaaa
      361 attccagatc ttcctgaatc gcagcagatc tccgcgtaca tcatgggaat ctgccaaact
      421 cgtcatttat cgttggtaaa atcgatgcgg cgtaagttgt caaaaacgta cgttgaagct
      481 gtaaaaatgg taaaggatta tgtacgttcc gaggagtttg tagacgatgc cgttggggat
      541 cacagcacaa cggaccggag cgataaagac gacaagggaa acaacaaagg taatacaggt
      601 aacaaatata aaggaagtgg tagcagcggc cacaggggct acggacgttc cagtcataag
      661 tctgactatc gtaacagcta ccgtccttat gaacggtacg cacccaagag gttgtcggcg
      721 gaagaggaaa gtttggtcaa gtcattgtca aaaacgccta aagaaatttt ggcaacggaa
      781 gagataagta aagattttac gccaccaaag ccgatgcagc cccgtttcgc tgtagataaa
      841 agtaaatggt gtatttttca cgaagataaa ggtcatgacg tggatgactg tagggaacta
      901 aagaatgtga tagttgaacg gctgaaattg gaggaacttg accatctaaa accgtcaagt
      961 gttaaagtcc ccgggacgaa gaaatttgcc tggcaacggg gaaaaaaaaa agctccagaa
     1021 aaacacatcc acatggtaca aatgtggcat gtgagtcacg ttcgtaaggt ggaagttttg
     1081 gaggaatggg aatgtgcccc tatcacgttt cctgatttct ggagggtctg tcccactgac
     1141 ctacccataa cgataaccgc cacggtagga cgatgcaagg tctcgagaat ttatgtagat
     1201 acggaaagcg ctgttgatgt cttgtacgag cattgcttct tacagctacc acaagatgtg
     1261 caggacaagc taaaaccccc actccatccc gtcgcggggt tcacaggtga aatgacttgg
     1321 cctctgggtc gagtaagcat tgacgttacg ttagaggaaa atatgaaacg gcgaacggta
     1381 gctttaaact ttgtggttgt cagaagccag tcgaagtaca acattatcat gggacgggaa
     1441 gcgttgtgcg aattcggcgc gatagtatca actgtgcatg gcatgatgaa attcccaact
     1501 ccgttaggcg ttgcaactat tttctctgat agggtcccga ttgtgggcca ggttgaacag
     1561 ccgttgcatc agacagcacc gattgaacaa gggggaagcg ttatcatcaa tcattccttt
     1621 cctgagaaga caatacagat tggacacacg ttatccgacg caatgaaaag tgcgttatgt
     1681 gaactcttgg taaacaacgc tgacgtgttt gcatggcaag agtcagacat gacgggagta
     1741 cctcgtacca ttgcagaaca tcgtttaaat gccaacccaa gtatgattcc agtaaggcaa
     1801 aagaaacggg gcatggctct ggagcgtagc atcttcctaa ggaatgaagt cgagaagttg
     1861 gtacaagcaa acatattgcg agaggttaag taccaaacat gggttgccaa tctagtactg
     1921 gtcagaaaaa aatga
//
LOCUS       XM_071831056             987 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840811), mRNA.
ACCESSION   XM_071831056
VERSION     XM_071831056.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..987
                     /gene="LOC139840811"
                     /note="uncharacterized LOC139840811; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840811"
     CDS             1..987
                     /gene="LOC139840811"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687157.1"
                     /db_xref="GeneID:139840811"
                     /translation="MLEFSGETLTIYLAAGTDVVSSVLVAEHGGTQMPVYFVSMVLQH
                     GEVNYKPVEKLIFVLVHTARRLRRYFQAHPMLVLTDSPIKQVLRKPEVSGRLAKWAIE
                     LGEHEIHYAPRTAVKGQIMADFMVEFIYAAPPAPVVEEVPNIVTWELFTDGASSSDGA
                     GAGLILIGPGGEEHTYALRFEFPASNNEAEYEALLSGLRMAEKVGIKYLKVLVDSQLV
                     ANQMNGTFEARDPAMQNYLALAEEMANKFERFSITQEAATVEEVETWMSPIVTYLKNG
                     TLPVDGATARKIRMKAPMYMLRDGVLFKKSFRPTAFKVCWPKRGRNNRKGGA"
     misc_feature    <79..315
                     /gene="LOC139840811"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    439..759
                     /gene="LOC139840811"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(454..465,553..561,568..570,640..642)
                     /gene="LOC139840811"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgttagagt tctcaggcga aactttgaca atttacttgg cggcgggaac tgatgttgtt
       61 agctcggtgc ttgtcgcgga gcatggcggc acacagatgc cagtttattt tgtgagcatg
      121 gtgctacaac atggagaagt caactacaaa ccggtcgaga agctcatttt cgtgttggtc
      181 cacaccgcaa gacggttgcg acggtacttt caagcgcacc caatgcttgt gctaactgat
      241 tcgcctatta aacaggtatt gagaaaaccg gaggtttctg gcaggctagc caagtgggca
      301 atcgaactgg gtgaacatga aatccattac gccccccgta ccgctgtcaa aggccaaatc
      361 atggcagatt ttatggttga attcatatac gccgcgccac cagcgccggt cgtcgaagaa
      421 gtaccgaata tcgtcacatg ggaactattc acggacggag catcgagttc tgacggagcg
      481 ggtgcaggtc taattttaat tggtcctggc ggagaggagc atacctacgc gttgcgtttc
      541 gagttccccg cctccaataa tgaagcggaa tatgaggcat tgctatctgg tttgagaatg
      601 gctgaaaagg tgggaataaa atacctaaag gtgttggttg attcccaact cgtggcgaat
      661 cagatgaacg ggacatttga agctagggat ccggctatgc aaaattattt ggcattggca
      721 gaagaaatgg ccaacaaatt cgagcgtttc tcaataacgc aagaggcagc cactgtagaa
      781 gaggtcgaga cgtggatgag tcctatcgtt acgtacctaa agaatgggac gttgccggtc
      841 gacggggcaa cggcacgtaa gattcgtatg aaagcaccta tgtacatgtt aagggatgga
      901 gttctgttca agaaatcctt caggcccacc gcttttaagg tgtgttggcc caagcgaggc
      961 agaaacaatc gtaagggagg tgcatga
//
LOCUS       XM_071831057             582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840813), mRNA.
ACCESSION   XM_071831057
VERSION     XM_071831057.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..582
                     /gene="LOC139840813"
                     /note="uncharacterized LOC139840813; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840813"
     CDS             1..582
                     /gene="LOC139840813"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687158.1"
                     /db_xref="GeneID:139840813"
                     /translation="MKLIKKVNVNLPFIDVIAGMPKYAQFMKDLLTNRKKMESISSVT
                     LNAACTAVVTNQLPEKLEDLGFFTIPYLLGDLTCMRALADLGASINLMPYSIYLKLTP
                     GKLRPTRMAIQLAERSIKYPRGIIENMLVKTGTLVFPADFLTLRIGDQKVTFAIDKAL
                     KYPVSLDDTCYYLQTVDTHVEFLQEFPELQGTG"
     misc_feature    238..429
                     /gene="LOC139840813"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(250..252,256..258,262..264,334..342)
                     /gene="LOC139840813"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    250..258
                     /gene="LOC139840813"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    250..252
                     /gene="LOC139840813"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(334..345,355..366)
                     /gene="LOC139840813"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgaagttga ttaagaaagt gaatgtcaac ttgcctttta ttgatgttat tgcggggatg
       61 cccaagtatg ctcaatttat gaaagatttg ctcaccaacc gtaaaaagat ggaaagcatt
      121 tcatccgtga ctttgaatgc agcatgtaca gcggtggtga caaaccaact tcccgagaag
      181 ttggaagatc tgggtttttt tactattcct tatttattgg gggatcttac ctgtatgcgg
      241 gcattggcgg acttgggtgc tagtattaat ttaatgccct actctattta ccttaaacta
      301 acacctggga aacttagacc cacacgtatg gccatacaac tagctgaacg ctctattaaa
      361 taccctcgtg gaattataga gaatatgcta gttaagaccg ggacattagt tttccccgct
      421 gattttttga cccttagaat aggtgaccaa aaggtgactt ttgctattga taaggcatta
      481 aaataccctg tgtccttaga tgatacttgt tattatttgc aaaccgtgga cacgcatgtt
      541 gagtttttgc aggagtttcc agaattgcag ggaacaggat aa
//
LOCUS       XM_071831058            1782 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 12-like (LOC139840814), mRNA.
ACCESSION   XM_071831058
VERSION     XM_071831058.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1782
                     /gene="LOC139840814"
                     /note="protein FAR1-RELATED SEQUENCE 12-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139840814"
     CDS             1..1782
                     /gene="LOC139840814"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 12-like"
                     /protein_id="XP_071687159.1"
                     /db_xref="GeneID:139840814"
                     /translation="MSTATDGTVSDYSVEENVSGDEGRDEQVEPPLEAAPVSRFGFVN
                     QGMVFQNKAELIYAVQKWNILHNREIVVTQSKPGYWQAHCRITGSSYKGPQERYHCCC
                     LIASEIEHQICLNVAYPDTNIQAQIKNTLHVDVRYGKAWNARRIAIEQLFGTWESNFI
                     QLPNYLNELVSTNPDTIVLFENGPEIEEGFDTFKFVFWAFGLAIKAFKLCIPIICIDG
                     THLKGSYRGKLLTTVGKNANNQLIPVAFALVDEESNESWVWFLQMLQENVIGNEKLCV
                     ISDRHPGILHAMGAQTYGWEHRYCLRHIRSNLLSKVPKVKLLKHLCWTVGSTTNQILY
                     KNSLKAIKKASMEAWQYLHDTDLGKWTVYRDILRSRWGNTMTNIAESLNNVFRHARMM
                     PIKACIEYTFDYTRQHFYDKSRDARQCNLPLSKNMFNIFNERAKRAQRYKTTCYNEQQ
                     AVFKVRSTYQRSGEGGTDYTVEFKEKRYSCGIWQHQRLPCSHAIFVCSHLNEDINKCI
                     SKKYTTPTWREQYSHHFNPLRDLSYWAHIQWNIMADPSRLIKHRGRKQTKRIKNQMDE
                     REKQKPKCGICRAEGHNRNTCPRTRMP"
     misc_feature    <556..1320
                     /gene="LOC139840814"
                     /note="Transposase, Mutator family; Region:
                     Transposase_mut; cl27632"
                     /db_xref="CDD:474953"
     misc_feature    637..921
                     /gene="LOC139840814"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    1435..1509
                     /gene="LOC139840814"
                     /note="SWIM zinc finger; Region: SWIM; cl45927"
                     /db_xref="CDD:459272"
ORIGIN      
        1 atgtctactg caaccgacgg tacagtttct gattatagtg ttgaagagaa tgtttccggt
       61 gacgaaggta gagatgagca agtggaacca ccgctggagg ctgccccagt ttcacgtttc
      121 gggtttgtta atcaaggaat ggtgttccag aacaaagccg aacttatata tgctgttcag
      181 aaatggaata tactccataa tagagaaata gttgtcacac aaagcaagcc gggttattgg
      241 caagcacatt gtagaataac tggctcaagt tacaagggtc cacaagaaag ataccattgt
      301 tgctgcttaa ttgctagtga aattgagcat caaatatgtt taaacgttgc ttatccagat
      361 accaacatcc aagcccaaat aaaaaataca ttgcatgtgg atgttcgtta cggtaaagca
      421 tggaatgcta ggcgtattgc aatcgaacaa ttgtttggaa cttgggaaag taattttatt
      481 caactaccaa attatttgaa tgaattagtt tctaccaatc cagacacaat tgttctgttt
      541 gaaaatggac ctgaaattga agaaggtttc gacacattta aatttgtgtt ttgggcattc
      601 ggtctagcca ttaaagcatt taaattgtgt attccgatca tttgtatcga tggcacccat
      661 ttgaaaggta gttatagggg taagttgtta acaacagttg gcaaaaatgc taacaatcaa
      721 cttatacccg ttgcctttgc actagttgat gaagaaagta acgaaagttg ggtttggttt
      781 ttgcaaatgc tccaagaaaa tgttattgga aacgaaaagt tgtgtgtcat ctctgatcga
      841 catccaggta tcttgcatgc aatgggtgct caaacgtatg gttgggaaca tagatactgt
      901 ttgcgccaca ttcgtagcaa cttgttgagc aaagtcccta aagtaaaatt gctcaaacac
      961 ttgtgttgga cagtcggttc aacaacgaat caaatattgt acaagaattc cctcaaagcc
     1021 atcaaaaagg ctagtatgga ggcttggcaa tatttgcatg atactgattt aggtaagtgg
     1081 accgtgtata gggacatact gaggagtcgt tggggtaaca caatgacaaa tattgctgag
     1141 tccctcaaca atgtgtttcg tcatgcccga atgatgccga tcaaagcgtg tattgaatat
     1201 acatttgatt acaccagaca acatttctac gataaaagtc gagatgcaag gcaatgtaat
     1261 ttaccactgt ccaagaacat gtttaacatc tttaacgaac gagcaaaaag agctcaaaga
     1321 tacaaaacaa catgttataa cgaacaacaa gctgtgttca aggttcggtc aacttatcaa
     1381 agaagtggag aaggtggcac cgattacaca gtagagttta aagagaaaag gtattcatgt
     1441 ggaatttggc aacaccaaag attaccttgc tctcatgcca ttttcgtgtg tagccatcta
     1501 aacgaggata taaataaatg catcagtaaa aagtacacaa ctcctacatg gagagagcaa
     1561 tatagccatc attttaatcc actaagagac ttgagctact gggcacatat acaatggaac
     1621 attatggccg atccatcaag attgattaag cacaggggga ggaagcaaac aaaacgtatt
     1681 aagaaccaga tggatgagcg tgaaaagcaa aaaccaaagt gtggtatatg cagggctgaa
     1741 ggtcacaaca ggaatacttg tccaagaact agaatgccat ag
//
LOCUS       XM_071831059             969 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable leucine-rich repeat
            receptor-like protein kinase IMK3 (LOC139840815), mRNA.
ACCESSION   XM_071831059
VERSION     XM_071831059.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..969
                     /gene="LOC139840815"
                     /note="probable leucine-rich repeat receptor-like protein
                     kinase IMK3; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840815"
     CDS             1..969
                     /gene="LOC139840815"
                     /codon_start=1
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase IMK3"
                     /protein_id="XP_071687160.1"
                     /db_xref="GeneID:139840815"
                     /translation="MEINGELIKFNGGEDLTSFEILDAPGEVIGKSSYGTLYKANLVT
                     NDSVVCLRFFRPTCTKKVQDLMHMVQLLGSIRHPNLVPLYGFYYGPRGEKLLVHPYYE
                     KGNLAQFVKDRKDECHKWTVISKISKGIAKGLDYLHNGLQNPIIHGNLKSKNIFLDQN
                     QQPFISDFGLHAFLNPSAAQEMLEAAAAEGYKAPELINIEDMNEATDIYNFGLILLEL
                     VTGKILVNKNSNSVHDSYLDNSLRNAVLDNRISDLYHPDLLIDGNKGDGNLVNEERVL
                     GFFRLAMDCCSISPSLRPDIKQICKKLQDIGHQEDQIMRSMMIMDS"
     misc_feature    85..918
                     /gene="LOC139840815"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(85..96,103..105,109..111,145..147,151..153,241..243,
                     292..303,445..447,457..462,466..468,496..501)
                     /gene="LOC139840815"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggaaatta acggggaatt gattaagttt aatggtggtg aagatctaac tagttttgaa
       61 atattggatg ctcctggtga agttattggt aaatctagtt atgggacatt gtataaggct
      121 aacttagtga ccaatgattc agttgtttgt ttgagattct ttagaccaac ttgtacaaag
      181 aaagtacaag atttgatgca tatggtgcaa ctactggggt caattaggca tcctaatttg
      241 gtacctcttt atgggttcta ttatgggcct agaggtgaga agcttcttgt tcatccttat
      301 tatgagaagg gaaatttggc ccaatttgtt aaagatagaa aagatgaatg tcataaatgg
      361 acagtcatct ctaaaatatc aaaaggcatt gctaaaggat tagattatct acataatggg
      421 cttcaaaatc caatcatcca tggaaatctc aagtcaaaaa acatattttt agaccaaaat
      481 cagcagccat ttatatcaga ttttggtcta cacgcattct taaatccatc tgcagctcaa
      541 gaaatgttgg aagcagctgc tgctgaaggg tataaagcac ccgaattgat caatatagaa
      601 gatatgaatg aggctactga tatttacaac tttgggctga ttttactaga attagttacc
      661 ggaaaaatac tagttaacaa gaactcaaac tctgttcatg attcatattt ggataactcg
      721 ttgaggaatg cagtattgga taatcggata tctgatttgt atcatcctga ccttttgatt
      781 gatggtaaca aaggtgatgg aaatttggta aacgaagagc gcgttttggg attctttcgg
      841 ttggctatgg attgttgttc tatatcgcca tctctcaggc ccgatataaa gcaaatttgt
      901 aaaaaacttc aagatattgg acatcaagaa gatcaaatta tgagaagtat gatgatcatg
      961 gattcatga
//
LOCUS       XM_071831061             468 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides oleosin L-like
            (LOC139840816), mRNA.
ACCESSION   XM_071831061
VERSION     XM_071831061.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..468
                     /gene="LOC139840816"
                     /note="oleosin L-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 38 Proteins"
                     /db_xref="GeneID:139840816"
     CDS             1..468
                     /gene="LOC139840816"
                     /codon_start=1
                     /product="oleosin L-like"
                     /protein_id="XP_071687162.1"
                     /db_xref="GeneID:139840816"
                     /translation="MTDTHQTFNPQQQFGRPHHQQHHQTSSRAHQALKAVTASIAGGS
                     LLVLSGLTLAGTVIALTVTTPLLVIFSPVILPAVITVFLLATGFLTSGGFGVAAVTVL
                     SWIYKYVTGGHPPGAESLDQARDKLGYKAREMKGRAEQATGMGHHQTTGGIGH"
     misc_feature    88..420
                     /gene="LOC139840816"
                     /note="Region: Oleosin; pfam01277"
                     /db_xref="CDD:396026"
ORIGIN      
        1 atgaccgaca cacatcaaac ttttaaccca caacaacagt tcggtagacc ccaccaccaa
       61 cagcaccacc aaacttcatc gcgagcccat caagcgctca aggcggtaac cgcctcgatc
      121 gccggaggct cgctgttagt actatccggt ctcacgttag ctgggaccgt gatagcactc
      181 acagtcacta caccgttact ggtgatattt agtcctgtaa tcttaccggc agtgatcacc
      241 gtgtttcttc tggccactgg gttcttgacg tccggcgggt tcggggtagc ggcggtgaca
      301 gttttgtcgt ggatttataa gtacgtgacg ggtggacatc caccaggggc ggagtcgttg
      361 gatcaagcga gggataagtt gggttataaa gcaagggaaa tgaaaggtag ggcggaacaa
      421 gctactggaa tggggcacca ccagaccact gggggcatag gacactag
//
LOCUS       XM_071831062            2127 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RNA polymerase sigma factor
            sigA-like (LOC139840817), mRNA.
ACCESSION   XM_071831062
VERSION     XM_071831062.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2127
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2127
                     /gene="LOC139840817"
                     /note="RNA polymerase sigma factor sigA-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139840817"
     CDS             1..1923
                     /gene="LOC139840817"
                     /codon_start=1
                     /product="RNA polymerase sigma factor sigA-like"
                     /protein_id="XP_071687163.1"
                     /db_xref="GeneID:139840817"
                     /translation="MTILWLVLPNIPMYMVIVSVMEYLAFRAMTTCFGKFCVLLRFTD
                     DSYLDGYISTIGVDFFVEVDRNLGFFESLEKEDLLPTPVPGVRIGNASTKVCMYVFAY
                     FVGVCMYVGTCSCRGTVAWYAVEVRWRSTVAEYGRRVTVAVEASELGSSSYYSDVNEK
                     LSSSSNDLGFIFVPTKNVISAKKLSNYGHGFKSNRHNQDTHYIRALKEHVDAASDYSS
                     IDQWLQGFEHSEVKGSNEEFSVDALLLLQKSLLEKQWNLTTESTVTTANPTEKSCKKI
                     YVSGSGKSARRRRIDTQRKTENKRFSSNEVGVRKPLKFVISPELLQNRAGGYVKGLTS
                     DTLLTHAEVVVLSKKIKIGQHLEERKSRLKERLGYEPSEVQLAESLKISRPELQMKQI
                     ECKIAREKLAMSNVRLVMSVAQKYASMGAEIGDLVQGGLIGLLRGIEKYDSSRGFKIS
                     TYVYWWIRQGVSKALIENSRTLRLPIHMHERLSAIRNAKAKLEEKGITPSIEKIAESL
                     NMSTKKVLNATEAKCKVFSLDRPAFPSLNGLPGDTIHSYMADDHPGNNPWHGVDNEAL
                     KDEVNKLMTTTLREREREIIRLYYGLDNEFLTWEDISRRMGLSRERVRQVGLVALEKL
                     KHAARKTKLEAMLVEH"
     misc_feature    100..>192
                     /gene="LOC139840817"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    160..162
                     /gene="LOC139840817"
                     /note="G2 box; other site"
                     /db_xref="CDD:206661"
     misc_feature    1009..1875
                     /gene="LOC139840817"
                     /note="RNA polymerase sigma factor, cyanobacterial
                     RpoD-like family; Region: Sig70-cyanoRpoD; TIGR02997"
                     /db_xref="CDD:274382"
     polyA_site      2127
                     /gene="LOC139840817"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgacaatac tttggctagt tttgccaaac atacccatgt atatggtaat tgtatctgtt
       61 atggaatact tggcatttcg tgcaatgaca acttgtttcg gcaaattttg tgttttgctt
      121 agatttactg atgactcata tcttgatggt tatatcagca caattggtgt ggattttttc
      181 gttgaagtgg atcggaacct tggctttttt gaaagtcttg agaaggaaga cttgcttcct
      241 actcccgtgc cgggggttag gattggtaac gcttcgacga aggtttgtat gtatgttttt
      301 gcttattttg ttggtgtttg tatgtacgta ggtacgtgtt cttgcagggg tacggtggcg
      361 tggtacgctg ttgaagtacg gtggcggagt acggtggcgg agtacggaag gcgggttacg
      421 gtggcggttg aggcgagcga gttgggttca tcttcatatt actctgatgt aaatgaaaag
      481 ctttcaagca gtagtaatga tcttgggttt atatttgttc caactaagaa cgtgattagt
      541 gcaaaaaagc tgtccaacta tgggcacggt tttaaatcta atcggcataa tcaagatacg
      601 cattacatac gagctctaaa ggaacatgtg gatgctgctt ctgattattc cagtatagac
      661 caatggcttc aaggatttga acactctgaa gtcaaaggct cgaatgaaga gttttcagtt
      721 gacgccttac tcttattaca gaagtctttg ttagaaaaac aatggaatct tacaaccgag
      781 agcaccgtga ctactgctaa tccaacagaa aaaagttgca aaaagattta tgttagcggg
      841 tcaggaaaat ctgcccgtag gcgtagaata gatactcaga ggaaaacaga aaataaaaga
      901 ttttcttcta atgaagttgg tgttaggaaa cctttgaaat ttgtaatcag tccagaactt
      961 ctccaaaatc gtgcaggagg ctacgttaaa gggttaacta gtgatacatt gttaactcat
     1021 gcagaggttg tggttttatc aaaaaagatc aaaattggtc agcacttaga agagcgtaaa
     1081 tcaagattga aggaaagatt gggatatgaa ccatcagagg tccaacttgc agaatccctg
     1141 aaaatttcac gacccgagtt acaaatgaaa caaattgaat gcaaaatagc tagagaaaag
     1201 ctagccatga gcaatgtccg gttagtaatg tcagttgcac aaaagtatgc tagcatggga
     1261 gctgaaatcg gggacctggt tcagggaggt ctgattggac tacttcgtgg gattgagaaa
     1321 tatgattcgt cacgggggtt taaaatctct acctatgttt attggtggat aagacagggt
     1381 gtttcaaaag cgttgattga aaactctaga accctgagat tacctatcca tatgcatgaa
     1441 agactgagtg caattcgaaa tgccaaggct aagcttgagg aaaaaggaat caccccgtca
     1501 atcgaaaaaa ttgcagagag tttgaacatg tcaacaaaga aagttctaaa tgccactgag
     1561 gcaaaatgca aagtattctc actcgacagg ccagcatttc cttctttaaa tggtcttccg
     1621 ggagatacta ttcacagtta catggcagat gatcaccctg ggaacaaccc ttggcatgga
     1681 gtagataacg aagcactcaa ggatgaagtg aacaagttga tgaccacaac tttaagggaa
     1741 cgtgaaagag agatcatacg tttgtactat ggtcttgata atgaatttct tacttgggaa
     1801 gatattagtc gaaggatggg gttatctaga gaacgagtta ggcaggtggg gcttgttgca
     1861 cttgagaaac taaaacatgc agcccgcaag acaaaactcg aggctatgct agtggagcat
     1921 tgatttttgt tatagccgga actaggtgaa agtgcctgta tatacatacg atagatacat
     1981 aattatacat ataatacgtt gtatgtaaac acttaaagtt tgcgaaataa tctggtgcac
     2041 attattcgga aaatgttcat atagcaatat agcatgttaa aatatcgatt acatattttt
     2101 tgtaatacac catgttgttt tattcaa
//
LOCUS       XM_071831063            3399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pumilio homolog 2-like
            (LOC139840819), mRNA.
ACCESSION   XM_071831063
VERSION     XM_071831063.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3399
                     /gene="LOC139840819"
                     /note="pumilio homolog 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     Proteins"
                     /db_xref="GeneID:139840819"
     CDS             320..3052
                     /gene="LOC139840819"
                     /codon_start=1
                     /product="pumilio homolog 2-like"
                     /protein_id="XP_071687164.1"
                     /db_xref="GeneID:139840819"
                     /translation="MLSELGRRPLNDGSFGDELEKEIGLLLHEQRREADDHERELNMY
                     RSGSAPPTVEGSLSAIGGLFGSNNNGNNSTNLAFSEFAGRNGFMSEEELRADPAYLSY
                     YYSNVNLNPRLPPPLKSKEDWRFTQRLQSGGLGGIGDRRKANRTDGGGGGGGVSLFSM
                     PPGFNSKKQETENSEVEKVKGSAEWGGDGLIGLPDLGLGSKQKSLADIFQDDMGRSTP
                     PSGHPSRPASRNTFDNNDDTLGPTDTQGQLSNGPPTSYSYAAALAASLSRSGTPDPQH
                     IARVPSPVPTPIGPGRVNSNSNGQNLFNGGSSHSKEPEDLAAALSGMNLSNGGMGENK
                     NRNQFDQNLYVDGSSNNFYGGWDSSYSNYGTTGYSVNSPQMASVHGGNLNLPPLFENA
                     AAAASRFGLDPHSPGRMAGNGSFIDPMYLQYLRTTEYAAQLAALNDPTIDINNYLANS
                     YTDLLQKAYLGISPPHKSQYGVQFGGKTTSPNHHGYYGNHGYGMGLSYPGSPLMSPLP
                     NSPRGPGSPMRLSELNTRFSPQARNLGGGGGGVMGPWNLDGGDNSYGSSLLEEFKSNK
                     TKSFELSEINGHVVEFSADQYGSRFIQQKLETATIEEKNMVFKEIFPQALTLMTDVFG
                     NYVVQKFFEHGMPAQRREMAAKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVKE
                     LEGQIMRCVRDQNGNHVIQKCIECVPEQHIQFIITTFFDQVVTLSTHPYGCRVIQRVL
                     EHCEDQETQNKVMNEILANVSMLAQDQYGNYVVQHVLEHGKPNERSIIIHELAGKIVQ
                     MSQQKFASNVVEKCLTFGDASERKLLVTEMLGTTDENEPLQAMMKDQFANYVVQKVLE
                     TCSDQEREHILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRVAAQMSHNAV"
     misc_feature    1154..2038
                     /gene="LOC139840819"
                     /note="Nucleic acid binding protein NABP; Region: NABP;
                     pfam07990"
                     /db_xref="CDD:400378"
     misc_feature    2024..2989
                     /gene="LOC139840819"
                     /note="Pumilio-family RNA binding domain; Region: Pumilio;
                     cd07920"
                     /db_xref="CDD:153420"
     misc_feature    order(2192..2197,2204..2206,2300..2305,2312..2314,
                     2411..2413,2420..2422,2516..2521,2528..2530,2618..2623,
                     2627..2632,2639..2641,2726..2731,2735..2740,2747..2749,
                     2852..2857,2861..2866,2873..2875,2963..2965,2972..2974)
                     /gene="LOC139840819"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:153420"
ORIGIN      
        1 atttatatct ctatattgta atttgttaat ttctgctttt tttgggtttc ttgatcataa
       61 agttttgatc tttttagtta tcaagaactg atttttagct gttacatcat agttaatctt
      121 aaagactgtt tcttttgtat tagggttttt tagggtttgt ttaattttga ggtataagta
      181 atcaagattc gatttttatc agctcagctt actaattttg ctatattatc atctgggtat
      241 tgattgttta ggttataaag tagtttcttg catctgggta tttttgttat tagctttata
      301 ggtttaatat atataaagaa tgttgtctga attgggtagg agaccattga atgatggttc
      361 attcggagac gaattggaga aagaaatagg attgttgctt catgaacaaa ggcgagaagc
      421 tgatgatcat gaaagggagt taaatatgta tagaagtggt tcggccccac cgactgtaga
      481 gggttcttta agtgcaattg gtggtttatt tggaagtaac aataatggaa acaatagtac
      541 taatttagca ttttctgagt ttgctggcag aaatggattt atgtctgagg aagaacttag
      601 ggctgatcct gcttatttat cgtactatta ctcgaatgtt aacttaaacc ctaggttgcc
      661 gcctccactg aagtcgaaag aggattggcg atttacccaa agactgcaaa gcggcggttt
      721 aggaggtatt ggagatagga ggaaagctaa tcgaactgat ggaggcggtg gcggcggtgg
      781 ggtgtcgctt ttttcgatgc cgccgggttt taattcgaag aaacaagaaa ctgagaattc
      841 ggaggtggag aaagtgaagg gttcagctga gtggggtggc gatgggttaa tcggtttgcc
      901 tgatttaggt ttaggtagca aacagaaaag ccttgctgat atttttcagg atgatatggg
      961 ccgttcaact ccaccttctg gtcatccgtc tagaccagct agtcgcaata cttttgataa
     1021 taatgacgat actttgggcc ccacagacac ccaaggccaa ctcagcaacg gtccgccaac
     1081 atcatactct tacgctgcag cattggccgc ttctttatct aggagcggga cccctgaccc
     1141 gcaacacatt gcccgggttc ctagcccagt cccaactcct atcggacccg gtcgagtcaa
     1201 ctctaattca aatggtcaaa atctcttcaa cggtggctcg tcccactcta aagagcctga
     1261 agatttggcg gctgctttat cgggaatgaa tttatcaaat ggaggcatgg gtgaaaacaa
     1321 gaaccgaaat cagttcgatc agaatctgta cgttgatgga tcgtctaata acttttacgg
     1381 tgggtgggac tcatcgtatt cgaactacgg tacaaccggg tattcggtca attcaccaca
     1441 aatggcgtcg gttcatggtg gcaatttgaa tctgccgcca cttttcgaaa acgctgcggc
     1501 cgccgcttca cgatttggat tggatcctca tagcccgggc cgcatggcgg gaaacgggtc
     1561 gtttattgac ccaatgtatc tacaatactt aaggaccacc gaatacgctg cccaattagc
     1621 tgctttaaac gatccgacta ttgatataaa caattatctc gcgaattcgt acaccgattt
     1681 acttcaaaaa gcgtatcttg gaatatcgcc accgcataag tcgcaatacg gtgttcagtt
     1741 tggtggaaag actactagtc caaaccacca tggttactac gggaaccatg gttatggaat
     1801 gggcttatcg tatcccggaa gcccattaat gagcccactt ccaaactctc ctcgtgggcc
     1861 aggaagccca atgaggctta gtgaactcaa tacccgattc tcccctcaag cgagaaactt
     1921 aggtggggga ggtggtggcg ttatggggcc gtggaattta gatggtggtg ataatagtta
     1981 tgggtcgtcc ttacttgaag aatttaagag caataaaact aagtcatttg agctatctga
     2041 aataaatggc catgttgtgg aattcagtgc ggatcaatac gggagtcgtt tcattcaaca
     2101 gaaacttgaa actgcaacaa tagaagaaaa aaacatggtt tttaaagaaa tcttccccca
     2161 ggctcttact ctaatgaccg atgtctttgg gaattacgtt gttcaaaagt ttttcgagca
     2221 tggaatgccg gcccaaagaa gagaaatggc tgcaaagctt ttaggacacg tgctgacgct
     2281 cagccttcaa atgtatggtt gtcgtgttat ccagaaggcg attgaagttg tggacttgga
     2341 ccaaaaaatc aaaatggtga aggaacttga aggtcaaatt atgcgttgtg tacgtgatca
     2401 gaacgggaat cacgttattc agaagtgtat tgaatgtgtc cctgaacaac atatacagtt
     2461 tatcattact actttctttg atcaagttgt tacactttcg acccatccgt atggttgtcg
     2521 tgttatccag agggtacttg aacactgtga agatcaagaa acacaaaata aggtgatgaa
     2581 tgagattctt gccaatgtaa gcatgcttgc acaagatcag tacggaaatt atgtcgttca
     2641 gcatgtactg gagcatggaa agccgaatga acggtcgata ataatccatg aattggcggg
     2701 aaagattgtt caaatgagtc aacagaaatt tgcgtcaaac gttgtcgaga aatgtttgac
     2761 ttttggtgat gcgagtgaac gcaaactcct agtgaccgag atgcttggca ccactgatga
     2821 aaacgagcct cttcaggcga tgatgaagga tcaatttgcg aactatgttg tgcaaaaagt
     2881 cctagaaact tgtagtgatc aagaacgaga acatatcttg tcacgaataa aagttcatct
     2941 gaatgcactg aaaaagtaca cgtatggaaa acatattgtt gctcgtgtag agaaacttgt
     3001 tgctgctggt gaaaggagag ttgcggcgca gatgtcacac aacgctgttt aggaggagta
     3061 ggaagagtga gttgtacagc taaccgaggc tagtttgagc tgctatcgaa aacaaatggt
     3121 cagtgtatta tgtatgtgct gctgatttgc aaatgaagtt tattacttgt gctagaagaa
     3181 agaaactgta aatgccctag tttttaagga ggtttataat acatagtcga ggctcatgtt
     3241 tccttggata ggttgtaaaa aaatgagtga aaaataactg gttttgtttt gttgttacgt
     3301 cgtgactgta caaatatgtt ggcctacgtt gaagagttgg attgttgctc atatgtattg
     3361 tatttaaaca gttatcttat gcagctgaaa atgcatctt
//
LOCUS       XM_071831064             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840820), mRNA.
ACCESSION   XM_071831064
VERSION     XM_071831064.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139840820"
                     /note="uncharacterized LOC139840820; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840820"
     CDS             1..567
                     /gene="LOC139840820"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687165.1"
                     /db_xref="GeneID:139840820"
                     /translation="MPMNVVIPGGNQIKSTPECQKLKWKINGETFESYMVLLPLGGCE
                     MVLGIQWLWTLGDIKWNFEALTMLFTYKGKRIKLRGMRKSMVQWLNGKKTNKSVGSQQ
                     AHLNAMYLCVYPTTLCSMDIDVQKEEKQSEGLTILLNEFNDIFEVPTSLPPKRTFDHR
                     IPLKEGTQPLNIRPYRHPQPKRMRLNPW"
     misc_feature    <4..156
                     /gene="LOC139840820"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(13..24,34..45)
                     /gene="LOC139840820"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcctatga atgtggttat acctggaggt aatcaaatca aaagtacacc cgaatgccaa
       61 aagttgaagt ggaagataaa tggagaaact tttgaaagtt acatggtttt attgccgtta
      121 ggagggtgtg aaatggtatt gggaattcaa tggttatgga ccttagggga tatcaaatgg
      181 aactttgagg cgttaacaat gttgtttact tataaaggca agcgaattaa gttaagaggt
      241 atgcgtaaat caatggttca atggctaaat ggtaagaaaa ctaacaagtc agtgggcagt
      301 caacaagctc atttgaatgc catgtatctc tgtgtatatc caactacttt gtgttcaatg
      361 gatatagatg tccaaaagga agaaaaacaa tcagaagggt tgacaatctt actaaatgaa
      421 ttcaatgata ttttcgaggt tccaacgagt ttaccgccaa agaggacatt tgatcatcga
      481 atacctttga aagaaggaac acaaccgtta aatattcgac cttataggca tccgcaaccc
      541 aaaaggatgc gattgaatcc atggtag
//
LOCUS       XM_071831065             927 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840822), mRNA.
ACCESSION   XM_071831065
VERSION     XM_071831065.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..927
                     /gene="LOC139840822"
                     /note="uncharacterized LOC139840822; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840822"
     CDS             1..927
                     /gene="LOC139840822"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687166.1"
                     /db_xref="GeneID:139840822"
                     /translation="MVTSTRSAVAGNENMPEYMKTVMTQFNQAIATINGRIDHVLIQH
                     QWFTDEITKLKGGEGSSNRHGSSQLTRFTKVEFPRFDGSDVKEWLYRCRQFFEIDNLE
                     DEEKIRIVSIHLYKKALTWHQQFIKLNGQVDWEVYEQAILKRFGTTIEDPMAELKNLR
                     QTGSIDSYYEEFEALLNKVELTVKQAVSLFLGGLQKEIELTVRMFKPKTLEEAYGLSK
                     FQEDTIAISKKRYNAILPTPRNNTSYGVKHMQYGSTSANTVTLPPTNTHLALTNTPHS
                     STFKANDQNVTKKRLSQKEYEEKRLKKLVLLL"
     misc_feature    280..687
                     /gene="LOC139840822"
                     /note="Ty3 transposon capsid-like protein; Region:
                     Ty3_capsid; pfam19259"
                     /db_xref="CDD:437091"
ORIGIN      
        1 atggtgactt ctaccagatc ggcggtggcc ggcaacgaga acatgccgga atatatgaaa
       61 actgtgatga cgcaatttaa tcaagcaata gcgacgatta atggcagaat agatcatgtg
      121 ttgatacaac atcaatggtt cacggatgaa ataacaaaat tgaaaggcgg cgaaggatct
      181 agcaaccggc atggttcttc acagttgacg aggtttacga aggtggagtt tccacggttt
      241 gacggtagtg atgtgaagga atggttgtat agatgcaggc aattttttga gatcgacaat
      301 ttagaagacg aagaaaagat ccgcatcgta tcgattcact tgtacaaaaa agccctaaca
      361 tggcaccaac aattcataaa gctcaatggt caagttgatt gggaggtgta tgagcaagca
      421 attttgaaaa gatttggtac tactatcgaa gatcctatgg cggaattgaa gaacttaagg
      481 caaaccggtt cgattgatag ctactatgag gaattcgagg cattattaaa caaggtagag
      541 ttgactgtca aacaagcagt gagcttgttc cttggtggac ttcaaaaaga aattgagcta
      601 acggttcgaa tgtttaagcc aaaaacgttg gaagaagcct acggattatc aaaatttcaa
      661 gaagatacta tcgccatttc aaagaaaagg tacaacgcta ttttaccaac tccaagaaat
      721 aatactagtt atggtgttaa acatatgcaa tatgggtcga caagtgcaaa tactgttact
      781 ttaccaccta ccaatacaca tttagcctta accaatacac ctcattctag taccttcaaa
      841 gcaaatgacc aaaatgtaac taaaaagaga ttatctcaaa aggaatatga agaaaaaagg
      901 ttgaaaaaac ttgtgctttt attgtga
//
LOCUS       XM_071831066            2711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At5g16860 (LOC139840823), mRNA.
ACCESSION   XM_071831066
VERSION     XM_071831066.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2711
                     /gene="LOC139840823"
                     /note="pentatricopeptide repeat-containing protein
                     At5g16860; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139840823"
     CDS             1..2562
                     /gene="LOC139840823"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At5g16860"
                     /protein_id="XP_071687167.1"
                     /db_xref="GeneID:139840823"
                     /translation="MRKQPPRHLLNFSISSSSPQQPHFKHFPVSFFTTISPRTQQCSS
                     SLTKVKLHHQQLTVNGLQSPQLIDMYISRNPSQALAILTRLPPSPSSAFYWNSLIQRA
                     VRSRLLHHALDLFRDMHVLGWRPDGYTFPFVFKACGELSAFRIGVSLHGVVCVLGYED
                     NVFVGNALVAMYGRCGDIGSARQVFDEMLCRKVADVISWNSIVAAYMQNRDSKKAIQM
                     FYHMTNYRICADAVSLVNILPAFASVRASMQGKEAHAYALKTLLAEDLFVGNAIVDMY
                     AKCELMDDANKVFEQMKVKDVVSWNAMVTGYSQIGRCEDALGLFEKMREENIELNVVT
                     WSAVIAGYAQRGYGYEALDVFRQMLVSGSQPNVVTLVSLLSGCACAGTLLQGKEIHSY
                     CIKKILNIDKNDPGDEQMVINSLIDMYAKCKAGDLARKCFDSVAPLDRNVVTWTAMIG
                     GYSQHGDANNALELFSHMLKQNKPTKPNAFTISCALMACARFASLRLGKQIHGYVIRS
                     RYEKSDVLFVDNCIIDMYVKSGDVDVARVVFNNMNQTNVVSWTSLLTGYGMHGRGLET
                     LELFNKMRNAGLPIDGVTFIVVLYACSHSGLVEKGLEYFDIMTREFGIVPGVEHYACM
                     VDLLGRAGQLEKAMEVIKNMPMEPSPVVWVALLGSCRVHTNVELGEYASNKLLELGCE
                     NDGTYTLLSNIYANARRWKDVAKVRFLMKDTGIRKRPGCSWVQGKTGTATFYVGDKTH
                     PLSHEMYNLLGDLMHQIKALGYVPDMSFALHDVDDEEKGDILVEHSEKLALAYGILTT
                     APGVPIRITKNLRVCGDCHVAIMYISKIIEHEVILRDSSRFHHFKNGYCSCKGYW"
     misc_feature    277..2547
                     /gene="LOC139840823"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    283..363
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    379..573
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    592..675
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    808..885
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    889..978
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    994..1077
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1330..1413
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1558..1632
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1645..1728
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1744..1836
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1852..1932
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2050..2136
                     /gene="LOC139840823"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgaggaaac aaccaccacg tcacctttta aatttctcaa tctcatcctc atcaccacaa
       61 caacctcatt ttaaacactt tcctgtgtcc ttcttcacca ctatatcacc acgtactcaa
      121 caatgcagtt cctcattgac caaagtcaaa cttcatcacc aacaactcac agtcaacggc
      181 ctacaatcac cacaactcat agatatgtac atctcccgca acccatcaca agcccttgct
      241 atcctcactc gtttacctcc atcaccctca tctgctttct actggaactc tttgattcaa
      301 cgcgctgttc gttctcgatt actccatcat gctcttgacc tgtttcgtga tatgcacgtg
      361 cttggttggc gtcctgatgg ttacacgttt ccttttgttt tcaaggcttg tggagagctt
      421 tcggcgtttc gaattggtgt ttcgttgcat ggagttgttt gtgtgcttgg ttatgaggat
      481 aatgtttttg ttggtaatgc tttagtggca atgtacggtc gttgtggtga tatcggtagt
      541 gcacgccaag tgttcgatga aatgctttgt agaaaggttg cggatgttat ttcgtggaac
      601 tcgattgttg ctgcttatat gcagaatcgt gattcgaaaa aagcaattca gatgttttat
      661 catatgacaa attatcggat ttgtgctgat gctgttagtc ttgttaatat tcttcctgcg
      721 tttgcgtctg ttcgtgcatc gatgcaaggc aaggaggctc atgcttatgc gttaaaaacg
      781 ctgctcgctg aggatctgtt tgttggtaac gcgatagtag acatgtatgc caaatgtgag
      841 ttgatggatg atgcaaacaa agtttttgag cagatgaaag tgaaagatgt ggtttcttgg
      901 aatgcaatgg ttacagggta ctcacagata ggtagatgtg aagatgctct tggtttattt
      961 gagaagatgc gtgaggaaaa cattgaattg aatgtggtta catggagtgc tgtgatcgct
     1021 ggttatgctc aacgaggtta tggttatgaa gcccttgacg ttttcaggca gatgcttgtt
     1081 tctgggtccc aacccaatgt tgtgaccctt gtttcactgc tatcgggctg tgcatgcgca
     1141 gggacattgc ttcaaggtaa ggagattcac agttattgca taaaaaagat tctaaatata
     1201 gacaagaacg atcctggaga tgaacaaatg gtaattaatt ctctgataga catgtatgcc
     1261 aagtgcaagg ctggtgatct tgcacgtaag tgttttgatt ctgttgctcc tttagataga
     1321 aatgtagtga cgtggacagc catgattggt ggatattctc aacatggtga cgctaacaat
     1381 gcgttagaac ttttctcaca tatgcttaaa caaaacaagc ctacaaaacc aaatgctttt
     1441 acaatatctt gtgctttaat ggcctgtgct cgttttgcct ctttaagact tggtaagcag
     1501 attcatgggt atgtaattcg cagtagatat gaaaaatctg atgtattatt tgttgacaac
     1561 tgtattattg acatgtatgt taaatcgggt gatgttgatg tggcccgtgt tgtatttaat
     1621 aacatgaacc aaacaaatgt tgtatcttgg acatctttat tgaccgggta tggaatgcat
     1681 ggtcgtggtt tagaaaccct cgagctcttt aacaaaatga gaaatgcagg tctcccaata
     1741 gatggtgtga catttattgt tgtgctttat gcttgtagcc actctggttt agttgaaaaa
     1801 gggttggagt atttcgacat tatgacacgg gaattcggga ttgtacctgg ggtcgaacat
     1861 tatgcgtgta tggttgatct tttgggtcgg gctggtcaat tagagaaagc tatggaggtg
     1921 attaaaaaca tgcctatgga acctagccca gttgtgtggg tggctttact tggttcgtgc
     1981 agggttcata caaatgtaga attaggggaa tatgcttcga ataagttatt agaactaggg
     2041 tgtgaaaacg atggaacata tacacttttg tccaatatat acgccaatgc taggcggtgg
     2101 aaagatgtag ctaaagttag gtttttgatg aaagatacag ggattaggaa gcgacccggg
     2161 tgtagttggg ttcaggggaa aacgggtact gcaacgtttt atgttgggga taaaactcac
     2221 ccactttctc acgagatgta taatcttctt ggtgatttga tgcatcaaat taaagcactt
     2281 ggttatgttc ctgatatgag ttttgctcta catgatgtag acgatgagga gaaaggtgat
     2341 attcttgttg aacatagtga aaaattggca cttgcatatg ggattttaac aacagctcct
     2401 ggtgtaccga ttaggatcac gaaaaatttg cgtgtatgtg gcgattgtca cgttgccatc
     2461 atgtatatat ctaagataat tgaacatgag gtaatattga gggattctag tcgctttcat
     2521 cattttaaga atggatactg ctcctgcaaa ggttattggt gacgaaaatt caagtgtata
     2581 tgagaacttg ttgaacacat atgaagctct ggctgggagt gtaacatcta attataaact
     2641 acttgaagtg atacctgtaa tgttattagg tgcattatgg cttcaagtgc tccatgacag
     2701 ttcattgata c
//
LOCUS       XM_071831067             823 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840824), mRNA.
ACCESSION   XM_071831067
VERSION     XM_071831067.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..823
                     /gene="LOC139840824"
                     /note="uncharacterized LOC139840824; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840824"
     CDS             122..823
                     /gene="LOC139840824"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687168.1"
                     /db_xref="GeneID:139840824"
                     /translation="MTMIGRIDPDASLDYVELQIFPSQNRYEAFVCSNKRSEKVASGA
                     LERLLLHSPQVKDLLSKGSNTNFKILPPDNVNDAEWFTTATFTRFLHIIGSRDIVGIG
                     NEIIQLEETKMFQLSLSGKADVNITSSVDSKNELLKAVDLRLMSLKDEIVATFNQATN
                     GRCSIKDISDLENFAHHLGAKDTSISGQPNKSVTQPARPAQFATYKQDHHLLKPYLFQ
                     GLITEACRNEPFSNS"
ORIGIN      
        1 tactattcag taacactttt aaacgcacca ccgtcagcca ccgttagcca ccgccgcaac
       61 taatcggaca gaaacaacac acatacgtcc acctttgttc atcagctttt tgttcttgtt
      121 gatgacaatg attggaagaa ttgatccaga tgcttcactt gattatgttg aacttcagat
      181 atttccaagc cagaacaggt atgaggcatt tgtatgtagt aacaaaaggt cagaaaaggt
      241 agcatcagga gcgttagaac ggttattatt gcattcacct caagtaaaag atttgttgtc
      301 taaagggtcg aatacaaatt tcaagatttt gccacctgat aatgtcaatg atgctgagtg
      361 gtttacaaca gccacgttta caagatttct gcatattatt ggttcgcgag acatcgttgg
      421 tataggaaat gagatcattc aattagagga gactaaaatg ttccaacttt cattgtctgg
      481 caaggctgat gttaatatta catcgtcagt cgattcgaag aatgaactac ttaaagccgt
      541 tgatttaagg ctcatgtcat taaaagatga aatagttgct acattcaacc aggctactaa
      601 tggcagatgc tcaattaaag acatatctga cctggaaaat tttgcacatc atttaggagc
      661 caaagataca agtatttcgg gtcaaccaaa taaatctgtt actcaacctg ccagacccgc
      721 ccaatttgct acctataagc aagatcatca cctactaaaa ccatatcttt ttcagggact
      781 cattacagaa gcttgtagaa atgagccttt ttccaacagt tga
//
LOCUS       XM_071831069             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small heat shock protein,
            chloroplastic-like (LOC139840825), mRNA.
ACCESSION   XM_071831069
VERSION     XM_071831069.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139840825"
                     /note="small heat shock protein, chloroplastic-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 19 Proteins"
                     /db_xref="GeneID:139840825"
     CDS             1..588
                     /gene="LOC139840825"
                     /codon_start=1
                     /product="small heat shock protein, chloroplastic-like"
                     /protein_id="XP_071687170.1"
                     /db_xref="GeneID:139840825"
                     /translation="MALLKHLALKFHTRSVAQKLLNSNLLTRPVPQFRPAYAASRFFN
                     TNSGHGDHRGPAADSFNAEVYDELATRRLNRLLKAPYTTRVIEPTSSVEKPECLNIFV
                     NMSGVKEEDVKISVEDNTVFIEAEGDEDFKEVHDFEKYNCWIDLPDNTYKINDIKAEM
                     RKNLGELKLTVPKLKEEEKLKEEELVYNIEVNVKK"
     misc_feature    277..516
                     /gene="LOC139840825"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     Region: ACD_sHsps-like; cd06464"
                     /db_xref="CDD:107221"
ORIGIN      
        1 atggctttgt tgaagcatct tgctttaaag ttccacacca gatcagttgc tcagaagctt
       61 cttaattcta atttgttaac cagacccgtc ccccaatttc gtcctgcgta tgcagcttct
      121 cgtttcttta acaccaactc tggccatggc gatcatcgtg gtcctgctgc agactctttt
      181 aatgcagaag tgtatgatga attagcaact aggaggctaa atcgtctact aaaggcgcct
      241 tacacgacga gagtgattga gccaactagt tctgtcgaaa aacctgaatg cctcaacata
      301 ttcgtaaaca tgtctggagt gaaagaggag gatgtcaaga tttcagttga agataacact
      361 gtgttcattg aagcagaagg ggatgaggat tttaaggagg tacatgattt cgaaaagtat
      421 aattgttgga ttgatttacc ggataatact tacaaaatca atgatattaa ggctgagatg
      481 aggaagaatt taggagagtt gaaactaact gtgcctaagt tgaaagagga agaaaagttg
      541 aaagaagagg aattggtgta taatattgaa gttaatgtta aaaagtaa
//
LOCUS       XM_071831070            1062 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840826), mRNA.
ACCESSION   XM_071831070
VERSION     XM_071831070.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1062
                     /gene="LOC139840826"
                     /note="uncharacterized LOC139840826; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139840826"
     CDS             1..1062
                     /gene="LOC139840826"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687171.1"
                     /db_xref="GeneID:139840826"
                     /translation="MDALVCRKFGDPTTPPDSSKNATFSFLTSHPIPSLKSPTSVRVQ
                     IKATSVDFATYLQAEGKYQEKYDLPFIIGSDYSGVVESVGPNVTNFKIGDPVCSYTLV
                     GSFAHFVVVEECDLHRVPDECDLVAAAAIPVSYGTSHHALVHKANITPRQVLLVLGAA
                     GGVGLAAVQIGKICGATVIAVARGTEKVEYLKSEGVDHVVDLSKEDIIESVKAFLKTR
                     NLKGADVLYDPVGGKLTKESMKLLNWGAQILIVGFASGDFPVIPANVALVKNWTIHGV
                     YRRNCNDITQDTRGESLKKLLSWLLKGLFTINIYRTYKLKEANLAFLDIRDRKVIGKV
                     MITFDDPITATFRLSNDLN"
     misc_feature    1..1011
                     /gene="LOC139840826"
                     /note="Quinone oxidoreductase (QOR); Region: QOR1;
                     cd08241"
                     /db_xref="CDD:176203"
     misc_feature    order(151..156,397..399,409..411,472..474,481..489,
                     544..549,559..561,604..606,685..687,751..756,760..765,
                     826..831,982..984,988..990,994..996)
                     /gene="LOC139840826"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:176203"
ORIGIN      
        1 atggacgctt tggtatgcag gaagtttgga gatccaacaa cgccaccaga ttcatcaaaa
       61 aacgccactt ttagtttctt aacatctcac cctattccct cactcaagtc tcccacttca
      121 gtcagagtac aaataaaagc cactagtgtc gattttgcca cgtatcttca agctgagggt
      181 aaataccaag aaaaatacga tttgcctttc attatcggct ctgattactc tggtgtagtt
      241 gaatctgtgg gtcccaacgt aacaaacttc aaaattggtg atccagtttg ttcttatact
      301 cttgttggtt ctttcgctca ctttgttgtt gttgaagagt gtgatttgca tcgagttcct
      361 gatgaatgtg atctggtagc tgctgctgca attccagttt cttatggaac atctcatcat
      421 gcattggttc ataaagccaa tataacacct cgtcaggtgt tactagttct tggtgcagct
      481 ggaggtgttg gtcttgcagc tgttcaaatt ggaaagattt gtggtgccac tgttattgct
      541 gtagctagag gaactgagaa agtggagtac ttaaagtcag aaggtgtcga tcacgttgtt
      601 gatttaagta aagaagacat tatcgaaagc gtgaaggcgt ttctgaaaac aagaaacctt
      661 aaaggggctg atgttctgta tgatcctgtt ggaggcaagc ttaccaaaga aagcatgaag
      721 ctgttgaact ggggagcaca aattttgatt gtagggtttg ctagtggtga tttccctgtt
      781 attcctgcta atgttgctct tgttaagaat tggactattc atggtgtcta ccggaggaat
      841 tgtaatgata taacacaaga tacacgggga gaatctctta agaagctgtt atcctggtta
      901 ttaaaaggct tatttacaat caacatttat cgtacataca aactcaaaga ggccaatctt
      961 gcatttctgg atatcagaga ccgaaaagta attgggaagg taatgattac ctttgatgat
     1021 cctataactg caacttttag gctgtctaac gatttgaatt ag
//
LOCUS       XM_071831071             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840827), mRNA.
ACCESSION   XM_071831071
VERSION     XM_071831071.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139840827"
                     /note="uncharacterized LOC139840827; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840827"
     CDS             1..501
                     /gene="LOC139840827"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687172.1"
                     /db_xref="GeneID:139840827"
                     /translation="MSTQDTLIIRSDTRPPVLFDGKYYQWLHRITQYIDYKETGLPIP
                     VYELTGERRERAKGDMEAKNIIMQAISYELFENVDSNTSAKDIWDEIRRQQEGYDMTN
                     VTKLNNALGLYEDFKQEPDELLNDNYRRFNGVMNELKKCKIIKVNAEINMKFLKKLNS
                     DWIPYV"
     misc_feature    187..>417
                     /gene="LOC139840827"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtctactc aagatacttt gattatcaga tcagatacta gacctcctgt cttgtttgat
       61 ggcaagtatt accaatggct gcatcgtatc actcagtaca tagactataa ggaaaccggt
      121 ctaccaattc cagtctatga acttactggt gagagacgtg agcgtgctaa gggtgatatg
      181 gaagctaaga atatcatcat gcaagctatt tcgtatgaac tatttgagaa tgttgatagc
      241 aatacatctg ctaaggacat atgggatgaa ataaggagac aacaagaagg atatgacatg
      301 accaatgtca ctaagctgaa taatgcccta ggactttatg aagatttcaa gcaggaacct
      361 gatgaattac tcaatgataa ctacagacgt ttcaatggtg ttatgaatga gttgaaaaag
      421 tgcaaaatta taaaggtgaa tgctgagatt aacatgaagt ttctcaaaaa gctcaattct
      481 gattggattc cttatgtgta a
//
LOCUS       XM_071831072            1473 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840828), mRNA.
ACCESSION   XM_071831072
VERSION     XM_071831072.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1473
                     /gene="LOC139840828"
                     /note="uncharacterized LOC139840828; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840828"
     CDS             1..1473
                     /gene="LOC139840828"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687173.1"
                     /db_xref="GeneID:139840828"
                     /translation="MDSTWMSKCRSTLEFEEGLDKFLERIFSRKEIGGHIYCPCINCG
                     NLKGVDQVEAKSHLLCDGFFEGYKISTVLLEPDDTLMWDAEDDMEGLAECIFHMFEDE
                     DEDDDDVDIPETKNQSTVPNINAERFYKVLGDAKKELYSGCKFSILSFIIRLFHSKCV
                     GKYNEKGFSMILDTMREAFPHASIPKSLYKVRKLIRELGLGYEKIDACPNDSKKVEAK
                     VLHYFSLIPQLQRLFMSPKTSESMRWHQESRSKDGLFRHPADSPAWKTFDHQNREFSK
                     EPRNMRLGLASDGFNPFGNMSVSHSTWPVVLIPYNLPPWLCMKKPFLFLTVRIPGPSS
                     PGNNIDIYMHPLIDELKELWDTRVNTYDASTKSNFPLRACLIWTISDFPAYANLSGWS
                     TKGKLACPSCHKETKSIRLSNSHKEIFMAHRRWLEMLHAFCFLKDAFDGTKEHERPPC
                     CLTGEQVLAELKGFNIKFGKLVKDNPSLPYKWKKRMSLKL"
     misc_feature    10..204
                     /gene="LOC139840828"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    754..1386
                     /gene="LOC139840828"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atggactcga cttggatgtc taaatgtaga tctacccttg aattcgaaga aggactcgac
       61 aaattcttag aacgtatttt ctctagaaag gaaataggtg gtcatatata ttgtccgtgc
      121 ataaattgcg gaaatctcaa aggggttgat caggttgagg ccaaatcaca tctgctatgt
      181 gacgggtttt tcgaaggcta taaaatttca actgtgcttc tcgaaccaga tgatacacta
      241 atgtgggatg ctgaagatga tatggaagga ttggccgaat gcatcttcca tatgtttgaa
      301 gatgaagatg aagatgatga tgatgttgat atcccagaaa ctaaaaatca gagtactgta
      361 ccaaacataa atgctgaaag gttttataaa gtattgggag atgcaaagaa agaactatat
      421 tccggctgta agttctctat tctttcgttc attattagac tcttccattc gaagtgtgtt
      481 ggaaaatata atgaaaaagg attcagcatg attcttgaca caatgaggga agccttccct
      541 catgcttcca taccgaagtc attgtataaa gtcaggaagt taataagaga gttgggtctt
      601 ggttatgaga aaattgatgc ttgtccaaat gattctaaga aggttgaagc aaaagtgttg
      661 cattattttt cactcatacc acagttgcaa agattgttta tgtctcctaa aacgtccgag
      721 tccatgagat ggcatcaaga gagtcgttcg aaagatggtc tatttagaca tcctgcagat
      781 tcaccagcct ggaaaacatt cgatcatcag aatcgtgaat tttctaaaga acctcgtaac
      841 atgaggcttg gtttggcgag tgatgggttt aacccttttg gaaacatgag tgtttcacat
      901 agtacctggc ctgttgtttt gataccgtat aatctaccac catggttgtg catgaaaaaa
      961 ccttttttgt tcctaactgt acgtatacct ggtccatctt ctccaggtaa taatatagac
     1021 atctatatgc atcctctaat tgatgagttg aaggagttgt gggatactag agttaatact
     1081 tatgatgcat ccacaaagag taacttccca ctgcgtgcat gtttgatatg gacgataagt
     1141 gactttcctg cttatgcgaa cttatcgggt tggagcacta aaggtaaatt agcttgtcct
     1201 tcttgccata aggaaaccaa atcaatacgg ttatcaaact cccacaaaga aatcttcatg
     1261 gcacatcgtc gctggttgga aatgttgcat gctttctgtt ttttaaaaga tgcttttgat
     1321 ggcacgaaag aacatgaaag gccaccgtgt tgcttaacag gggaacaagt gcttgcagag
     1381 ctaaaaggtt ttaatataaa atttggaaaa cttgtgaagg ataacccatc tttaccatat
     1441 aaatggaaga agagaatgtc attgaaactt taa
//
LOCUS       XM_071831073             597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840829), mRNA.
ACCESSION   XM_071831073
VERSION     XM_071831073.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..597
                     /gene="LOC139840829"
                     /note="uncharacterized LOC139840829; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840829"
     CDS             1..597
                     /gene="LOC139840829"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687174.1"
                     /db_xref="GeneID:139840829"
                     /translation="MSRIQLDPLFIRYIKPAYYQQRASLAPTHEVVNVINDCMMELLE
                     CYARTYLSSDSICQSKRDSDFNSELYTTDYLNSINIGGLPKHNLSLKVGVPIMLLRNV
                     DQSGGLCNDKTILFRFQRRQFPIAVCFAMTINKSQGQSLANVGLFLPKPVFSHGQLYV
                     ALSRVTSKKGLKVLNLNKDNELTNTTKNGVFKEVLQHL"
     misc_feature    <37..330
                     /gene="LOC139840829"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <241..513
                     /gene="LOC139840829"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; Region: RecD; COG0507"
                     /db_xref="CDD:440273"
ORIGIN      
        1 atgtcgagga tccaattgga tccattattt attcgatata tcaaacctgc ctactatcaa
       61 caacgtgcaa gtcttgctcc aactcacgaa gttgtaaatg ttattaacga ttgcatgatg
      121 gagttactag aatgttatgc aaggacgtat ctaagttctg acagcatatg tcaatcgaaa
      181 agagattcag actttaatag tgagttgtac acaacagatt acctaaacag cattaacatc
      241 ggaggtttac caaaacataa tcttagtctc aaagtaggag taccaattat gttgcttagg
      301 aatgttgatc aatcaggtgg attatgcaac gacaaaacaa ttctgtttag gtttcaaaga
      361 aggcagtttc caatagccgt ttgctttgcg atgacaatca acaagagcca aggccaatca
      421 ttagccaatg ttggtttatt cctaccaaaa ccggttttca gtcatggtca attatatgta
      481 gctctatcta gagtcacatc taaaaaggga ctaaaggtgc taaatttgaa caaagacaac
      541 gaattaacaa atacaacaaa aaacggtgta ttcaaagaag ttttgcaaca cttgtag
//
LOCUS       XM_071831074             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840830), mRNA.
ACCESSION   XM_071831074
VERSION     XM_071831074.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139840830"
                     /note="uncharacterized LOC139840830; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840830"
     CDS             1..591
                     /gene="LOC139840830"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687175.1"
                     /db_xref="GeneID:139840830"
                     /translation="MGISFKKSFIKQIGNGLETSFWNEIWIGNTKLKEVYPRLFRLEV
                     QKDAPVGLRLQGNGLFNWAWARQPLGRGLDELESLEAQLAEVSIGPENEKWSWNLDGE
                     NRFTVKFLSGICDDYILQLESNPTSTLRNNLVPKKIEIFVWRLMKKRLPVRIELDKRG
                     IDLHSVRCPICDDDLETTDHIILHCPYAHDVWSRIF"
     misc_feature    <391..564
                     /gene="LOC139840830"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggaatca gtttcaagaa gtcttttatc aagcaaattg ggaatgggtt ggaaacgtca
       61 ttttggaatg aaatatggat tggaaatacc aaactcaaag aagtctaccc acgtttattt
      121 cggctagaag ttcaaaaaga tgctcctgtt ggtttgcgac tgcagggaaa tgggctgttc
      181 aattgggcct gggcccggca gcctttggga cgtggtctag acgaactcga aagtctggaa
      241 gctcaactcg ctgaggtttc tatcggtcca gaaaatgaaa agtggagttg gaatttagat
      301 ggcgaaaaca ggttcacagt taagtttcta tcgggaatct gcgatgatta tattcttcaa
      361 ctggaaagta atccaacaag tactcttcgg aacaaccttg ttccaaaaaa gatcgagatt
      421 tttgtgtgga gattaatgaa aaaaaggcta ccggttagga tcgagttgga caaaagaggt
      481 attgacctcc atagtgtgag atgtccaatt tgtgatgacg atttagagac aacggaccat
      541 attattctac attgcccata tgctcatgat gtttggtccc gaattttcta a
//
LOCUS       XM_071831075            1141 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter I family
            member 6, chloroplastic-like (LOC139840831), mRNA.
ACCESSION   XM_071831075
VERSION     XM_071831075.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1141
                     /gene="LOC139840831"
                     /note="ABC transporter I family member 6,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139840831"
     CDS             1..1116
                     /gene="LOC139840831"
                     /codon_start=1
                     /product="ABC transporter I family member 6,
                     chloroplastic-like"
                     /protein_id="XP_071687176.1"
                     /db_xref="GeneID:139840831"
                     /translation="MRGKSSNRYLKRHEARIEIIPRTTPNKYNPGIWLTNFCEHHLLF
                     QKAIRSPAAMSLLNRFGYCSSPSAPTLSFKQSISDFSIFTSPAVPRNRRYSNGFPSLK
                     LTAILATESPTVSVSGPPKLVLEVKDLTAVITESGQKILNGLNLSIYEGEIHAIMGKN
                     GSGKSTFAKVLVGHKDYEVAGGSVVFKGENLLEMEAEDRSLAGLFLSFQSPVEIPGVS
                     NSDFLQMAYNARRRKLGQPELDPLQFYGYIMPKLEMVNIKADFLNRNVNEGFSGGEKK
                     RNEILQLAVLGAELAILDEIDSGLDVDALRDVSKAVNALMTPTNSVLMITHYRRLLEF
                     IKPTYIHIMDGGRISKTGDISIASILEKEGYKAMSTT"
     misc_feature    <157..516
                     /gene="LOC139840831"
                     /note="cystic fibrosis transmembrane conductor regulator
                     (CFTR); Region: CFTR_protein; TIGR01271"
                     /db_xref="CDD:273530"
     misc_feature    361..1098
                     /gene="LOC139840831"
                     /note="sulfate ABC transporter protein; Validated; Region:
                     ycf16; CHL00131"
                     /db_xref="CDD:214372"
ORIGIN      
        1 atgagaggaa aatcgtctaa tcgatattta aaaagacatg aggcaagaat tgaaatcatc
       61 ccaaggacaa caccaaacaa gtacaatccg ggtatttggt taactaattt ttgtgaacac
      121 cacctgttat tccaaaaagc catcaggtca ccagcagcaa tgtctctact caaccgattt
      181 ggatattgct cttctccttc tgcacctact ctttcattca aacaatcaat ctccgacttc
      241 agtatattta catcccctgc cgttccccgt aaccgccgtt attctaacgg atttccatcg
      301 ttaaagttaa cggcaatact cgccactgaa tctccaaccg tttctgtatc tggtccgccg
      361 aagcttgtat tggaagtcaa agacctaacg gcagttataa ctgaatcagg acagaagatt
      421 ctaaacggtc ttaatctttc aatctacgaa ggcgagattc atgctattat gggaaagaat
      481 ggttccggaa agagtacctt tgcgaaggtt cttgttggtc acaaagatta tgaagttgct
      541 ggaggttcag ttgttttcaa gggagagaat ttgcttgaga tggaagcaga agacagatcg
      601 cttgctgggc ttttcttaag ctttcaatct cctgttgaaa ttccaggagt aagcaacagt
      661 gattttttgc agatggccta caatgccaga agaaggaaac ttggtcagcc agagcttgat
      721 ccacttcagt tttatgggta catcatgcca aagctggaaa tggtgaatat aaaggccgac
      781 tttctaaata gaaatgttaa tgaaggattt agtggcggtg aaaagaagcg aaacgaaata
      841 ttgcaacttg ccgtgcttgg ggcggaattg gcaatattgg atgaaattga ttctgggtta
      901 gacgttgatg cattaagaga tgtttcaaaa gctgttaacg cgctaatgac tcctacaaac
      961 tccgttttga tgattactca ttaccgacgg ctcctggagt ttattaaacc cacctatatc
     1021 cacatcatgg acgggggtag aatttcgaag accggtgaca tctctatagc tagtattctt
     1081 gagaaagaag gctataaagc aatgtccacc acataattgc agagtattaa ggtataattt
     1141 c
//
LOCUS       XM_071831076            1107 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840832), mRNA.
ACCESSION   XM_071831076
VERSION     XM_071831076.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1107
                     /gene="LOC139840832"
                     /note="uncharacterized LOC139840832; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840832"
     CDS             1..1107
                     /gene="LOC139840832"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687177.1"
                     /db_xref="GeneID:139840832"
                     /translation="MWHDLSNILKYDGAMWAIFGDFNEVRFESERKNTDFCEKRAKLF
                     NDFIKDNSLIDLPLGGRIYTRISDNGRKFSKLDRFLVSENLIQQWPNINVMVLDKKHT
                     DHCPLIPKDGNVDFGPKPVKVFDEWLKHKDSYDIIKSAWNLKVNKLRKWYSTSEGKLK
                     AEIEELINTVNDWERKAENIDLSEEQHEIWLKDRECLLQKEKTHFEMLKQKARFKWAL
                     EGDENSKFFHSYIRRRNQKNNIHGVNVGGVWTTNPSFIKSEAFNFFQGLFKRSTTESW
                     MLNQWDGPTLEPHTVEALEAKFTESEVIDAIKGCAKTKHQARMASISCSTQNSGILSG
                     MISCMQSIGFGNQVKSLTAVMPPSSLSFQRLRIL"
     misc_feature    <58..324
                     /gene="LOC139840832"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgtggcatg acctctcgaa tatactcaag tatgatggag ctatgtgggc tattttcggg
       61 gattttaatg aagtgagatt cgaatccgaa agaaagaata ccgatttttg cgaaaaaaga
      121 gccaaactat tcaacgattt cattaaagac aattcattga ttgatctacc attaggaggc
      181 agaatttata cgcgcatcag cgacaacggt agaaaattca gcaaacttga tagatttctt
      241 gtttcggaga atttaattca gcaatggcct aatattaatg tcatggttct cgacaagaag
      301 catactgatc attgcccatt aattccaaaa gacgggaacg ttgattttgg ccctaaacca
      361 gttaaagtct ttgatgaatg gctgaaacat aaagattcgt atgacatcat caaatcagcc
      421 tggaacttga aggttaacaa acttagaaaa tggtattcga cctcagaagg caaactgaaa
      481 gcagaaatag aggagttaat taacactgtg aatgattggg aaagaaaagc tgagaatata
      541 gatctaagtg aagaacaaca tgagatttgg ttaaaagatc gtgagtgtct gttgcaaaaa
      601 gagaaaacac atttcgagat gcttaagcaa aaggcaagat ttaaatgggc cctagaaggg
      661 gatgaaaaca gcaaattctt tcattcctac attcgccgga ggaaccagaa aaacaacatc
      721 catggtgtca atgtcggtgg agtttggacc actaaccctt cttttattaa atctgaagct
      781 tttaattttt ttcagggtct tttcaagaga agcacaactg aatcctggat gcttaatcag
      841 tgggatggac ctactctaga accacacacg gtggaagctt tagaagccaa attcactgaa
      901 tcagaagtca ttgatgctat caaaggatgc gcaaaaacaa agcaccaggc ccggatggct
      961 tcaatatctt gttctactca aaattctggg atattatcag ggatgatctc ttgcatgcaa
     1021 tcaattggtt ttgggaatca ggtcaaatct ctaacggcag taatgcctcc ttcatcactc
     1081 tcattccaaa ggttaaggat cctctaa
//
LOCUS       XM_071831077             884 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides methylesterase 17-like
            (LOC139840833), mRNA.
ACCESSION   XM_071831077
VERSION     XM_071831077.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..884
                     /gene="LOC139840833"
                     /note="methylesterase 17-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840833"
     CDS             1..828
                     /gene="LOC139840833"
                     /codon_start=1
                     /product="methylesterase 17-like"
                     /protein_id="XP_071687178.1"
                     /db_xref="GeneID:139840833"
                     /translation="MGERESLKDENSTTTSSPLKPHFVLIHGISGGSWCWYKLKSMMY
                     NSGYLVTCIDLKASGIHPSDPNSILTFDDYNQPLFDFLSSLPPNQKVILVGHSAGGLS
                     ITLATHKYASKVSCAVYVAATMLKNGLTTLEDIKHGVPDLSRYGDAYDLEFGFGKNQS
                     PTSAIIKKELLREVSYNMTPLEDYTLATMLLRPGPIHAILNAQFRDIDESLEKVPRVY
                     IKTMYDNVVRPDQQDKMVEKWPPSQMYVLESDHNPFFSSPFALFGLFVKVAASIDCT"
     misc_feature    13..822
                     /gene="LOC139840833"
                     /note="methyl indole-3-acetate methyltransferase; Region:
                     PLN02211"
                     /db_xref="CDD:215128"
ORIGIN      
        1 atgggagaaa gagagagtct gaaagatgag aattctacta ccactagtag tccattgaaa
       61 ccacactttg tgcttattca tggcataagt ggaggaagct ggtgttggta caagctcaaa
      121 agcatgatgt acaactctgg ttacttggtc acttgcatag acctcaaagc atctggcata
      181 catccttctg atcctaattc aattctcact tttgatgact ataatcaacc tctcttcgat
      241 ttcttgtctt ccttgcctcc gaatcaaaag gtaattttgg tgggacatag tgccggagga
      301 ctaagcataa cactagcaac acacaagtat gcaagtaagg tgagttgtgc ggtatatgtt
      361 gcagccacca tgctaaaaaa tggacttaca acacttgaag acatcaaaca tggagtacct
      421 gatttatcta gatatggtga tgcttatgat ttggaatttg gatttggaaa aaatcaatca
      481 ccaacatctg caattataaa aaaagagctt ctacgtgaag tctcatataa tatgacccct
      541 ctagaggatt acacattagc tacaatgcta ctacgaccgg gccctattca cgcaatacta
      601 aatgctcaat ttcgagatat tgatgagagt ttagaaaagg tgcctagagt atacattaaa
      661 acgatgtatg ataacgtggt gagaccagat caacaagaca aaatggtcga aaaatggcca
      721 ccttcacaaa tgtatgtttt ggagagtgat cacaacccat tcttctctag tccttttgca
      781 ttgtttgggt tatttgttaa ggtagcggct tctatcgact gcacctagaa gattttggtt
      841 aggtgattag gtttgatttt ccgcgactac atattttata aaga
//
LOCUS       XM_071831078             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840834), mRNA.
ACCESSION   XM_071831078
VERSION     XM_071831078.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139840834"
                     /note="uncharacterized LOC139840834; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139840834"
     CDS             1..588
                     /gene="LOC139840834"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687179.1"
                     /db_xref="GeneID:139840834"
                     /translation="MLEVVASYDNWIWHAYFEMAGSNNDLIVLNASPLFDSLLTDTAP
                     QVPYEIGDVDFDRGYYLADGIYPSWASFVKGFSNVVDAKRKYFTKKQSAARKDVERTS
                     GILQGRWGILRQPDRAYTVNAIKRIMYGCIILHNMIIEDNGFNIAENKSYYLSVNNLQ
                     GSTWYEMCNVYAEKTKELRDKDEHEYLRHTLVSHL"
     misc_feature    <4..429
                     /gene="LOC139840834"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgttggaag tcgttgcatc gtatgacaat tggatttggc atgcatattt tgaaatggcg
       61 ggttcgaaca atgacttgat tgtccttaat gcatctccat tgtttgatag tttactaact
      121 gacacggctc ctcaagttcc atacgaaatt ggggacgttg attttgatcg aggctactat
      181 cttgccgatg ggatttaccc ttcgtgggct tctttcgtta aggggttctc aaatgttgtt
      241 gatgcaaaaa ggaaatactt tacaaagaaa caatctgcag ctcgtaaaga cgttgagagg
      301 acatctggaa ttttgcaagg tcgttggggt attttaagac aacctgatag ggcatatacc
      361 gtaaacgcaa tcaaaagaat catgtatggt tgcattatat tgcacaacat gataattgaa
      421 gacaacggtt ttaacatcgc tgaaaataaa tcttactact tgtctgtcaa caacctacaa
      481 ggatcaactt ggtacgaaat gtgtaatgta tatgctgaga agacaaaaga gttgcgtgac
      541 aaagacgagc atgagtacct tcgacatact cttgtttcgc atctatga
//
LOCUS       XM_071831079             975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840836), mRNA.
ACCESSION   XM_071831079
VERSION     XM_071831079.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..975
                     /gene="LOC139840836"
                     /note="uncharacterized LOC139840836; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840836"
     CDS             1..975
                     /gene="LOC139840836"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687180.1"
                     /db_xref="GeneID:139840836"
                     /translation="MALIGKWWWRFKTETTSLWVKVISSIYGPSGRLFVGVPFHSDYY
                     KSVWIDILKNGDNIYEIGVPFRNLFAKVLGDGGSTSFWNNPWIGNDVLKDKFKRLWRL
                     DTEASALVKDRVIWNGSNWVGNWSWVREPSGCAGGELQSLSELIKDVVLNAEKKDSWR
                     WTLSSNGVFTTSGLATLINSRLLTSSNMNGETLHNNLVPKSGELDKRGIDLNSVRCPL
                     CDDDIETVGKGWDSIYQCGGLVHGLGLSYFNVGKVIWQAMAWTCAYLIWKNRNQKVFS
                     NKCWNTPVALNIIQVTSFDWMRKDAKEKLSYGTIGYITLKALLFEASY"
ORIGIN      
        1 atggccttga ttggcaagtg gtggtggagg tttaaaaccg aaaccacctc cttgtgggtc
       61 aaggtcattt cgagtattta tggtccttcg ggtaggcttt ttgttggcgt ccctttccat
      121 agcgactact acaagtcggt atggattgat attttaaaaa acggtgataa catttatgag
      181 attggtgttc cttttcgaaa tttgtttgct aaagttctag gtgatggtgg atctacttct
      241 ttttggaata acccttggat tgggaacgat gttttaaaag acaagttcaa acggctttgg
      301 agacttgata cggaagctag tgctttggtc aaagatcgtg tcatttggaa cggttcaaat
      361 tgggtgggta attggtcttg ggttcgagag ccgtccggat gtgcgggggg agagctacaa
      421 agtttatccg aattgatcaa agatgtggtg ttaaatgcgg aaaagaaaga ctcttggagg
      481 tggacactga gtagtaatgg ggtcttcaca acaagtggtc ttgctacttt gattaactcg
      541 cgacttctca cgtcaagcaa catgaatggt gagacgcttc acaacaatct tgtcccaaaa
      601 agtggagagc tcgataaaag agggattgat cttaattctg ttcgttgccc tttatgtgat
      661 gacgacattg aaacggtggg gaagggatgg gattccattt atcagtgtgg gggacttgtt
      721 catggactcg ggttaagcta cttcaatgtg gggaaagtta tttggcaagc gatggcgtgg
      781 acatgtgctt acttaatttg gaaaaaccgt aatcaaaagg tgttttctaa taaatgttgg
      841 aacactccgg tcgccttaaa tataattcaa gttacaagct tcgattggat gcgaaaagat
      901 gcaaaggaaa agttatcgta tggcacaatt ggatacataa ccctcaaagc cttattgttt
      961 gaagctagtt attag
//
LOCUS       XM_071831080             327 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840838), mRNA.
ACCESSION   XM_071831080
VERSION     XM_071831080.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..327
                     /gene="LOC139840838"
                     /note="uncharacterized LOC139840838; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840838"
     CDS             1..327
                     /gene="LOC139840838"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687181.1"
                     /db_xref="GeneID:139840838"
                     /translation="MAVTAEDWLDVVKRTPSSPDGIILVEELRLKTYVDDSSDGDDET
                     KAFGVLIQGRLRGRDRIKSSACYLLKTCRVNGGMRLFCTHFCMMKVHSFSKSVNSQFN
                     DCWLLQ"
ORIGIN      
        1 atggcggtga cggcagagga ctggctggat gtggtgaaac ggacaccgtc atcgccggac
       61 ggaataatac tcgtggaaga gcttcggctg aagacatatg tagatgattc cagtgacgga
      121 gatgacgaaa cgaaagcatt tggcgtactg attcaaggaa gacttagagg aagagatcgg
      181 attaaatcct cggcgtgtta tttgttgaaa acgtgcagag ttaatggagg aatgagatta
      241 ttttgcacac atttttgtat gatgaaagtt catagtttca gtaaaagtgt taattcacag
      301 ttcaatgatt gttggttgtt gcaatga
//
LOCUS       XM_071831081            1143 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840839), mRNA.
ACCESSION   XM_071831081
VERSION     XM_071831081.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1143
                     /gene="LOC139840839"
                     /note="uncharacterized LOC139840839; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840839"
     CDS             1..1143
                     /gene="LOC139840839"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687182.1"
                     /db_xref="GeneID:139840839"
                     /translation="MDKIFKMLEFVIDDDSNDEKIYNFVSSLADEDVEGEATSSRVPR
                     PRTYIPRDREDAAVRLYNDYFSETPNYTEKNFRRRYRMSRELFLRIIEGISNFNSSDI
                     PDYFMFFRERPDATGRQSLTILQKCTAAKRQMAYGTTPDLHDEYIKIVLEKTNAEDIV
                     RLYSFHAQKHGLPGMLGSIDCMHWEWKNCPIAWQGQYTRGDKKGPSIMLEAVTSQDLW
                     IWHAFFSMAGANNDINVLNYSPLFNTIKKGTAPPSPFDVNGHHYERGYYLGDGIYPDW
                     AMLGIFQMLKTPARSLDFNKIGRHMYACIVLHNMIQENNGFVIGKKEERMIQRNPPRR
                     LHRDLRDRDAMVKEIRDKQVHKQLEADLTEHVWNLSPYFRTANIIE"
     misc_feature    451..948
                     /gene="LOC139840839"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataaaa ttttcaaaat gctcgaattt gttattgatg acgattcgaa tgatgaaaaa
       61 atatataatt ttgttagtag tttggcggac gaagatgtcg agggagaagc tacaagttca
      121 cgagtccctc gcccccgtac ctatattcca agggatcgtg aagatgcggc agtgaggtta
      181 tacaacgatt atttttctga aactccaaat tatacggaaa agaactttag acgacgttat
      241 cgaatgagtc gtgaattatt tctccgtatc atcgaaggta tatcaaactt taatagtagc
      301 gatattcccg attattttat gttttttagg gaacgtcccg atgctactgg tcgtcaaagt
      361 ttgacgatac ttcaaaaatg cacggcggcc aaacgtcaaa tggcgtatgg aactacacct
      421 gatttacatg acgaatacat aaaaattgta cttgagaaaa ccaacgccga agatattgtt
      481 cggctttata gttttcatgc ccaaaaacat ggtttaccgg gtatgcttgg tagtattgat
      541 tgtatgcatt gggagtggaa gaattgtcca attgcgtggc aaggtcaata tactagaggt
      601 gataaaaaag gcccgtccat tatgctagaa gcagtcacct cgcaagattt gtggatatgg
      661 catgcattct ttagtatggc aggtgcgaac aacgacatta acgttttaaa ttattcacca
      721 ttgttcaaca ctattaaaaa aggaactgct ccaccttcac cattcgatgt taacgggcat
      781 cactacgaaa gaggttatta cctaggtgat ggtatatacc ccgattgggc aatgttgggt
      841 atatttcaaa tgttaaaaac tccggcgaga tctttggact tcaacaaaat aggaagacac
      901 atgtatgcgt gtatcgtatt acataacatg attcaagaaa ataacgggtt tgttattggg
      961 aagaaagaag aaagaatgat acaacggaac ccaccacgac ggttacacag ggatttgagg
     1021 gatcgagatg caatggttaa ggaaataaga gataagcaag ttcacaaaca gttagaggca
     1081 gatttaaccg agcatgtttg gaacttatca ccttactttc gtaccgctaa tattattgag
     1141 taa
//
LOCUS       XM_071831083            1377 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840840), mRNA.
ACCESSION   XM_071831083
VERSION     XM_071831083.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1377
                     /gene="LOC139840840"
                     /note="uncharacterized LOC139840840; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840840"
     CDS             1..1377
                     /gene="LOC139840840"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687184.1"
                     /db_xref="GeneID:139840840"
                     /translation="MLFQTDHVSFFPANNKNLLNQVLSAYFVVLPLRDEGAISLGLDN
                     LPGLFVGSLILTLIAAPLSTLTFSSSKFSKAKALVFIHRFFSASLVLFFILWMVSSPS
                     RNPSDSEYHGRFYVSVRIGFFLWVALLNLISISSTWARVIDAMDSESGSRLFGFIGAG
                     ATFGQLFGSLFATTMSWLGPYLLLIASLLMELAAQSSERIHKDVSHSFETEIKHQDEK
                     FGNKESSLWTASSAAASTKPRFWAMLEGLRLIWSSTYLLYVSLLLWLSAVTSSFFYFQ
                     KMTIIASTVASPTGRRQSFAQINSFIAVFILAGQLTLTGRILTVAGITTALCSAPFIA
                     FVNLIVIAIWPTYMAVAVLETFRKVVNYVVTRPGRELLFTVVSQDEKYKAKVCIDVVV
                     QRLGDATAAGMYKMLYSSLNGKTTTVSLYALPVCLLWMVTGFHLGRRQTQLAKSHKIS
                     HSSEILHI"
     misc_feature    64..1338
                     /gene="LOC139840840"
                     /note="ATP/ADP translocase [Energy production and
                     conversion]; Region: TlcC; COG3202"
                     /db_xref="CDD:442435"
ORIGIN      
        1 atgttatttc aaaccgatca tgttagtttt tttcctgcaa ataacaaaaa cttactgaat
       61 caagtattaa gtgcatattt tgttgtttta cctctacgag atgaaggcgc tatttcatta
      121 ggtttagata acctccctgg cctatttgtt ggatcattga ttttgacttt aattgctgcc
      181 cctctttcaa ccctaacttt ctcatcatcc aagttttcta aagctaaggc tttggtgttc
      241 atacacaggt tttttagtgc aagtcttgtt ctgtttttca ttttatggat ggtgtcatct
      301 ccttcaagaa atcctagtga ttcagagtac catggacggt tctacgtttc agttagaatt
      361 ggattcttct tatgggttgc tctgttaaat cttatatcta tatcttcaac ctgggcaaga
      421 gtcattgatg ccatggacag tgagtcaggt tcaagattgt ttggatttat cggtgctggt
      481 gctacattcg gccagctttt tggttcgttg tttgccacaa caatgtcttg gttgggacca
      541 tatctgcttt taattgcttc tctcttgatg gaactggctg cccagtcatc tgaaagaata
      601 cacaaggatg tgtctcatag ttttgaaact gaaatcaaac atcaggatga gaaatttggt
      661 aacaaggaat cttctttatg gactgccagc tcagctgctg cttcaacaaa gcctcggttt
      721 tgggctatgc ttgaaggact tcgccttata tggtcatcaa cttatttgtt atacgtatcg
      781 ttattattgt ggctaagtgc agttacctct tcgttcttct actttcagaa aatgactata
      841 attgcctcaa ctgttgcgag ccctacggga agaagacaat catttgcaca gatcaatagt
      901 ttcattgctg tttttatcct tgctggtcaa cttactctga cgggaagaat tcttactgtt
      961 gcagggatta ctacagctct ttgctcggca ccatttatcg ccttcgtaaa tttgatcgtg
     1021 attgctatat ggcctaccta catggcagtt gcagtgttgg agacctttcg gaaggtggta
     1081 aactatgttg taaccagacc cggtagagaa ctccttttta cagttgtgtc acaggatgag
     1141 aaatacaaag caaaggtatg catagatgtt gttgttcaaa ggcttggaga tgctactgca
     1201 gccggaatgt acaagatgct ctacagtagt cttaatggca aaaccaccac tgtctctctt
     1261 tatgcattac cggtgtgctt attatggatg gtaacaggat tccatttagg acgacgacaa
     1321 acacaacttg caaagtcgca caaaatttct cattcttctg aaattttaca tatttag
//
LOCUS       XM_071831084            1074 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides alpha/beta hydrolase
            domain-containing protein VTE7-like (LOC139840841), mRNA.
ACCESSION   XM_071831084
VERSION     XM_071831084.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1074
                     /gene="LOC139840841"
                     /note="alpha/beta hydrolase domain-containing protein
                     VTE7-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139840841"
     CDS             1..1074
                     /gene="LOC139840841"
                     /codon_start=1
                     /product="alpha/beta hydrolase domain-containing protein
                     VTE7-like"
                     /protein_id="XP_071687185.1"
                     /db_xref="GeneID:139840841"
                     /translation="MLKITTNITAAIPSMGIFPASNRKSCQFFGASTDVFPPFLIKEM
                     EKIKDPFARNLISRIEMLPVELSVSKNRIMSSCVTPIVQDTANNPLVLLHGFDSSCLE
                     WRYTLPLLEQAGLEAWALDILGWGFNKLETLPHCDVESKRDHLFQFWKSYIKRPMLLV
                     GPSLGAAVAIDFAINHPEAVDKLILINASVYSEGTGNMSKLPKSVAFASVSLLKILPL
                     RFYATNLSYNALPFNTCIDWTYITRLHCLLPWWKEATVDFMRSGGYNVSAQIKQVMNK
                     TLIISGENDRIIDSRLAVRLHCELPNAVIRQISNCGHIPHVEKPHVVADLIKDFRCKS
                     HNEVSFPLPSKTLHQTAVTSHAI"
     misc_feature    265..990
                     /gene="LOC139840841"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only]; Region:
                     MenH; COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 atgctgaaaa tcacaacaaa tattactgct gccattccat ctatgggaat atttccagct
       61 tcaaaccgga aaagttgcca gttttttgga gcgtctactg atgtttttcc gccatttttg
      121 atcaaagaaa tggagaaaat caaagacccg tttgctcgaa acttaatttc aaggattgaa
      181 atgctgcctg ttgagcttag tgtctcaaag aatcgtatta tgagtagttg tgtgacacca
      241 atagtacagg acactgccaa taatccactt gttctacttc atggcttcga cagttcgtgt
      301 ttagaatgga gatacacact cccgttgctc gagcaggctg gtttagaagc ttgggcactt
      361 gacattttag gatggggctt caacaaatta gaaacacttc cacattgcga tgtagagtct
      421 aagcgtgatc acctcttcca gttctggaaa tcatacatta aacggcctat gcttctagtg
      481 ggtcccagtc ttggagctgc agttgcaatt gactttgcta tcaaccatcc ggaagctgtt
      541 gataagctaa tattgattaa tgcaagtgtt tactcagaag gcacagggaa catgtccaag
      601 ttaccaaaaa gtgttgcctt tgccagtgtt tcgttgttaa aaatcctccc attgcgattt
      661 tatgctacta atctgtcata taatgcattg ccattcaata catgcataga ttggacttat
      721 attactcgat tacattgttt gttaccgtgg tggaaagaag caacggttga ttttatgaga
      781 agtggaggat acaatgtatc tgcgcagatt aaacaggtta tgaataaaac cctcataata
      841 tcgggagaaa acgacaggat cattgacagc agacttgcag tgcgactaca ttgtgaactc
      901 ccgaatgctg ttattcgcca aatatcaaac tgtggtcaca tcccacatgt ggaaaaacca
      961 catgttgttg cagacttgat caaagatttt aggtgtaaat cgcacaatga agtcagtttt
     1021 cctcttccgt caaagacttt gcatcaaact gcggtcacat ctcacgcaat ataa
//
LOCUS       XM_071831085            1257 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840842), mRNA.
ACCESSION   XM_071831085
VERSION     XM_071831085.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1257
                     /gene="LOC139840842"
                     /note="uncharacterized LOC139840842; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840842"
     CDS             1..1257
                     /gene="LOC139840842"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687186.1"
                     /db_xref="GeneID:139840842"
                     /translation="MLLALSTKNKVGFVDGTCEKQIDNGVLAAQWDRYNSVVLSWILN
                     FIYEDLNSGQIFSATASVVWTELKETYDKIDGSQYDEMVKLPACTCVAAPEFQSHNKT
                     LKLMQFLMGLDDSYMSIKSNLLLRDPLPDVKSAFAILSREESHRGVSGVGTSKTQNSA
                     YVAQTNNNNWINKSSNTCSFERGRGFNRGPNPNLKCTKCNKIGHTIDICFEIVGYPNN
                     FKKSFNGNTNRSFIANNYVSSCPSSSDSIVGSSYPTPSSSTSSPSPLSFSNEQMMKLL
                     SILNEKSFPVSDSVTNMSGWIIDSGASQHMTVSEKSLFNIVDVSDLNLHVTHPNGTKA
                     KVNKVGDLKLNKSIILTDVLIVPGYCDLKTRNTLGTGSVNGGLYLFDVFEGDSLMCNS
                     VVAYNFESVLLWHNRLGHPASPVLNI"
     misc_feature    <1..60
                     /gene="LOC139840842"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    1126..>1248
                     /gene="LOC139840842"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
ORIGIN      
        1 atgttacttg ctttgtcaac taaaaataaa gtaggatttg ttgatggtac ttgtgaaaaa
       61 caaattgata atggtgttct tgctgcccaa tgggatagat acaattctgt tgtattatct
      121 tggattctga attttatata tgaagattta aattctggac aaattttttc tgctactgct
      181 tctgttgtct ggactgagtt gaaagagact tatgacaaaa tagatggttc tcaatatgat
      241 gaaatggtca aattacctgc ttgtacttgt gttgctgcac ctgaatttca aagtcataat
      301 aaaactctaa agctaatgca atttttaatg ggtcttgatg attcctatat gtctattaaa
      361 agtaatttgt tacttagaga tcctttacct gatgttaaat ctgcttttgc tattttgtct
      421 agagaagaat ctcacagggg tgtatctgga gttggaacat ctaaaactca aaactctgca
      481 tatgttgctc aaaccaataa taacaattgg attaataaat cttctaatac ttgtagtttt
      541 gaaagaggta gaggatttaa tagaggacct aatcctaatc ttaaatgtac aaagtgtaat
      601 aaaataggac atactattga catatgcttt gaaattgttg gttatccaaa taattttaaa
      661 aaatctttta atggaaatac taatagatct tttattgcta ataattatgt gtctagttgt
      721 ccttcttctt ctgattctat tgtaggttca tcatatccta ctccttcttc ctctacatct
      781 tctcctagtc ctttgagttt ttcaaatgaa caaatgatga agctgttaag tatattaaat
      841 gagaaaagtt tccctgtttc tgactctgtt actaatatgt caggatggat tattgattct
      901 ggtgcaagtc aacatatgac tgtgtctgaa aaaagtcttt ttaatattgt tgatgttagt
      961 gatttaaatt tacatgttac tcatccaaat ggtactaaag ctaaagtcaa caaagttgga
     1021 gatttaaaac ttaacaaatc catcatatta actgatgttc ttattgttcc tggatattgt
     1081 gatttgaaaa ccagaaacac cctaggaact ggtagtgtga atggtggtct atatttgttt
     1141 gatgtttttg aaggtgactc tcttatgtgt aattctgtgg ttgcatacaa ttttgaatct
     1201 gtgttacttt ggcataatag gttgggtcat cctgctagtc ctgttttaaa tatttaa
//
LOCUS       XM_071831086             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840843), mRNA.
ACCESSION   XM_071831086
VERSION     XM_071831086.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139840843"
                     /note="uncharacterized LOC139840843; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840843"
     CDS             1..636
                     /gene="LOC139840843"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687187.1"
                     /db_xref="GeneID:139840843"
                     /translation="MNVDCFQWITNSGKYVNFSSHQVWIDLKADNVKVNWAHVIWFNY
                     LDPKQAFIIWLAKLNRLTTHDRLENWISGQNFKCALCGLVKDSVCHLFFSCEYSSKVW
                     RKIKERIIFKGIPNSLPEIMNELAKFPVSNHIWSIINRWVVAACVYFIWQERNFRMFR
                     NEERKEDVICSVIVNFVQCKLMSIKVKKSSAVMKAASLWNMRWIDNKLVLN"
     misc_feature    52..303
                     /gene="LOC139840843"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaatgtgg attgttttca atggattaca aattctggca agtatgttaa tttttcttcc
       61 catcaggtct ggattgatct aaaagctgat aatgttaaag tgaattgggc tcatgttatt
      121 tggttcaatt atttggatcc aaagcaggca tttatcatat ggttagccaa gctcaacagg
      181 ctaaccactc atgataggtt ggagaattgg atctcaggtc agaattttaa atgtgctcta
      241 tgtggactgg tgaaggattc tgtttgtcat ttgtttttct cttgtgaata tagtagtaag
      301 gtttggagaa agattaaaga aagaattatt tttaaaggta ttcctaattc cctgcctgag
      361 attatgaatg agttggctaa attccctgtt tcgaatcata tttggagtat tataaacaga
      421 tgggtggtag cagcttgtgt ttactttata tggcaggaaa gaaactttag gatgtttaga
      481 aatgaagaaa gaaaagaaga tgtcatatgt tctgttattg tgaattttgt gcagtgcaaa
      541 ttgatgagta tcaaagtgaa gaaatcttct gctgtgatga aggctgcgag tttgtggaac
      601 atgaggtgga ttgataataa attggtgttg aattag
//
LOCUS       XM_071831087            1190 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            PCL1-like (LOC139840844), mRNA.
ACCESSION   XM_071831087
VERSION     XM_071831087.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1190
                     /gene="LOC139840844"
                     /note="transcription factor PCL1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139840844"
     CDS             178..1002
                     /gene="LOC139840844"
                     /codon_start=1
                     /product="transcription factor PCL1-like"
                     /protein_id="XP_071687188.1"
                     /db_xref="GeneID:139840844"
                     /translation="MAEEVRITGYDAGADEDGGGSGGDDERVMEWEVGLPNVADLTPL
                     SQSLISSEMLSAFSITPEPHRNMTDVNRASKNTFSNLRGEYEQQALTKFNSLNSSSNK
                     IADLTDSRKVGCHGDVDGDVDGDVDGNGVIEEMDSGMLIDDDSTFRASKRQRLVWTPQ
                     LHKRFIEVVAHLGVKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGVSTDNP
                     SGSDHVFGSQNLREPNPMPDQQQMMQMPMPYRGFESNSYAAYDMARYQHRMTSNDK"
     misc_feature    631..792
                     /gene="LOC139840844"
                     /note="myb-like DNA-binding domain, SHAQKYF class; Region:
                     myb_SHAQKYF; TIGR01557"
                     /db_xref="CDD:130620"
ORIGIN      
        1 cttttaacaa gaataataat ttaataatcc atctcaccta tcatacacaa atatctatca
       61 atagctcatc cttttcaatc aattttttca tcttaaaacc ttcactgttt ccgtccaaac
      121 ttaaatatta tctaaaatta aaatcagttt agatattgta tagctgtatc tatatctatg
      181 gcggaggaag tgagaatcac cggttacgac gccggtgccg atgaggacgg cggcggcagt
      241 ggcggagatg acgaacgagt aatggagtgg gaggtagggt taccaaacgt cgctgatttg
      301 acgccgttat cacaatcctt aatctcatca gagatgttat cggcgttcag catcacgccg
      361 gaacctcacc ggaacatgac tgacgtcaat cgtgcttcta aaaacacgtt ctcgaatctt
      421 cgaggtgagt atgaacaaca agcgttgacc aaatttaata gtttaaattc ttctagtaat
      481 aaaatcgccg atctaactga ttcgcggaaa gtcggttgtc acggtgacgt tgacggtgac
      541 gttgacggtg acgttgacgg taatggagtg attgaggaaa tggattctgg tatgttaatt
      601 gatgatgatt caacatttag ggcttcaaaa cgacagcgtt tagtatggac accacaactg
      661 cataaacgat ttatagaagt tgtagcacat ttaggcgtta aaagcgcggt tccaaaaacg
      721 attatgcagt tgatgaatgt agaaggatta actcgtgaaa atgttgctag tcatttacaa
      781 aagtatagat tgtatttaaa aaggatgcaa ggtgtaagta ctgataatcc ttctggttcg
      841 gatcatgttt ttggttctca aaatttacgc gaaccgaatc caatgcctga tcagcagcag
      901 atgatgcaaa tgccgatgcc ttatcgtgga tttgagtcga attcgtatgc agcgtatgat
      961 atggcacggt atcaacatcg aatgacctcg aatgataaat agagattata atttaatttg
     1021 aggttttggg agcaaggagg ggtgaggttt tcattccttt ttgtatatgt ttttgaatga
     1081 atattaaatc aatcctttgt tttgctactt tgtttcctta tattcattgc tttatcataa
     1141 atgagttgca acaacatctt taatctgtgt tcatgctttt gtctattcaa
//
LOCUS       XM_071831088            1456 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840846), mRNA.
ACCESSION   XM_071831088
VERSION     XM_071831088.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1456
                     /gene="LOC139840846"
                     /note="uncharacterized LOC139840846; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840846"
     CDS             263..1456
                     /gene="LOC139840846"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687189.1"
                     /db_xref="GeneID:139840846"
                     /translation="MDYNHKLMLLIVMYLYLRYFWSRKRKRDLGSVMTGQLFTLQLLQ
                     GNDKQCVELLRMSRDSYVRLCTHFRVNGWLKDSKHLSVEEKMAMFLLMLGHNQRYVLI
                     KRLFQHSKQTIHKYFHEVLATMLQFAQENIVPTSFSPNLNIPGYHRRLRQVFKGAVGA
                     LDGTLIHARVPAAQQHLYRGRGKGDCYQNVLAICDFNMIFTFIVAGWEGVAHDSRILS
                     KALANQDAPFSLPPQDKYYLCDAAYTHTRGFMAPYRNVRYWLGDFRQRRALNSKEKFN
                     HGHAKLRNVIERSFGVLKARFAILTKMAPFDLVTQRNVTIACFALHNFIRKEGLSDEL
                     FSKYDQPNVQLNNDHIQRHGPEYENDEEEDGNEEVHPNGTRADRQYMVNLRDQIAQQL
                     MQARR"
     misc_feature    494..634
                     /gene="LOC139840846"
                     /note="Helix-turn-helix of DDE superfamily endonuclease;
                     Region: HTH_Tnp_4; pfam13613"
                     /db_xref="CDD:463934"
     misc_feature    743..1231
                     /gene="LOC139840846"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 tttctttgca gatggtttgt ttttttgaag atataagacg aaataagatc ttattttatc
       61 tgcaagcggg aagacctaaa taatagcttc caacttctga agacttttta acctaatatt
      121 atctccacct caaataacag agtcaccaaa tccaacccac ccacctactt tcaatatctc
      181 catcatcccc gatcttcaag tccggccata ccatcacttc cggcacatca tctttttcgg
      241 ccgaccaccg ccaaggtgca ttatggatta caatcataaa cttatgctcc tcatagttat
      301 gtatctatat cttcgttact tttggtcaag aaaaagaaaa cgagatctag gttcggtgat
      361 gacagggcaa ctatttacgt tacagttgtt gcaaggaaac gataaacaat gtgttgagtt
      421 gttacgtatg tcccgtgact cgtatgttcg actttgcact cattttagag taaatggttg
      481 gttaaaggat agcaagcatt tatcggtaga agagaaaatg gccatgttct tgttgatgtt
      541 aggtcacaat caacgttatg tacttatcaa acgcttattc cagcactcaa aacaaacaat
      601 tcataagtat tttcatgaag tattggctac aatgttgcaa tttgcacaag agaatatagt
      661 accaacgtcg tttagtccga atctaaacat tcctggatat cacaggaggt tacgccaagt
      721 ttttaaggga gcggttggtg cacttgatgg gactttgata catgctcgtg ttccagctgc
      781 tcaacaacat ttgtatagag gaagaggaaa aggagattgc tatcaaaatg ttttagcaat
      841 atgcgatttc aacatgatat ttacatttat tgttgctgga tgggaagggg tagcacatga
      901 ttcccgaata ttatccaaag ctttagcaaa tcaagatgca cctttttcac ttcctccgca
      961 agataagtat tatctttgtg atgctgccta tacacacact cgtggattta tggcaccata
     1021 tcgtaacgta aggtattggc ttggagattt tagacaaagg cgtgcattga actcgaaaga
     1081 aaaatttaac cacggacatg cgaaacttag aaacgttatt gaacgttctt ttggcgtctt
     1141 aaaagcacga tttgcaatat taactaaaat ggctcctttt gacttggtta cccaacgaaa
     1201 tgtaacaatc gcatgctttg cgcttcataa ttttataaga aaagagggtt taagtgatga
     1261 gcttttttca aaatatgacc aaccaaatgt gcaacttaat aatgatcata tacaacgtca
     1321 tgggcctgaa tatgaaaatg atgaggagga ggatggaaat gaggaggttc atccaaatgg
     1381 aactagagca gatcgtcaat atatggttaa tttgagagat caaattgctc aacaacttat
     1441 gcaagctaga agatga
//
LOCUS       XM_071831089             810 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840847), mRNA.
ACCESSION   XM_071831089
VERSION     XM_071831089.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..810
                     /gene="LOC139840847"
                     /note="uncharacterized LOC139840847; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840847"
     CDS             1..810
                     /gene="LOC139840847"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687190.1"
                     /db_xref="GeneID:139840847"
                     /translation="MGDLPPATNTNGAVKRLRSPTNKKGGEVPPWVLVMIEIMTYKDC
                     SIHSTDKLDRFCINCSESFCNECSSNHQGHKHVKIRRYTLRDVINRPDFQKHFDCSGI
                     QGYVTNKNKVLHLRERGDNQQLKGQQNTSYPSCMICNHTLIDAIYCSIQCKVGVFRFA
                     IVLLCLYFCMFSVGFRMMRLGMGHWSSGIEESLSTKRLRVQVLFGTICISAMKTENTE
                     VTTTENTEVTATENKESKNEGELENALDNAILEPSKTKRTRKGVPNRAPFI"
     misc_feature    130..237
                     /gene="LOC139840847"
                     /note="B-box zinc finger; Region: zf-B_box; pfam00643"
                     /db_xref="CDD:459886"
     misc_feature    238..462
                     /gene="LOC139840847"
                     /note="PLATZ transcription factor; Region: PLATZ;
                     pfam04640"
                     /db_xref="CDD:461376"
ORIGIN      
        1 atgggagatc ttcctccggc caccaacacc aatggcgccg taaaacgcct tcggtcaccg
       61 acaaacaaaa aaggtggaga agtaccacca tgggttttgg ttatgatcga gattatgacg
      121 tataaagatt gctcgattca ttcgactgat aaattggatc gattttgcat taactgtagt
      181 gaatcttttt gtaacgaatg tagttctaat catcaaggac ataagcatgt caagattcgt
      241 aggtacacat tacgtgatgt gatcaataga ccagattttc agaaacactt tgattgttca
      301 ggcattcagg gttatgtaac aaacaaaaac aaggtgctac atttgaggga aaggggggat
      361 aaccagcaac taaaagggca gcaaaacacg agttatccta gctgcatgat ttgcaaccac
      421 actctaattg atgccattta ctgcagcatc caatgcaagg ttggtgtttt ccgtttcgcg
      481 atagtgttgt tatgtttgta tttttgtatg ttttcggttg gattccgtat gatgaggctc
      541 ggtatgggtc attggtccag cggtatcgag gagtcccttt caaccaagag gttgagggtt
      601 caagtcctat ttgggacaat ttgtatttca gcaatgaaaa ctgaaaatac tgaagtgact
      661 acaactgaaa acactgaagt gactgcaact gaaaacaaag aaagcaaaaa cgaaggtgaa
      721 ctggagaacg cattagataa tgcgatacta gaaccttcca agacaaagag aacgagaaaa
      781 ggtgttccaa atagggcgcc atttatctga
//
LOCUS       XM_071831090            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840848), mRNA.
ACCESSION   XM_071831090
VERSION     XM_071831090.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139840848"
                     /note="uncharacterized LOC139840848; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840848"
     CDS             1..1035
                     /gene="LOC139840848"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687191.1"
                     /db_xref="GeneID:139840848"
                     /translation="MLLCHRKGCKSFEDIRTVNQVLHNTYRSACEAARLLGDDGEWSA
                     VLEEASVSATSSQLRSLFAHILSYCTVTNPLALWENHWKLMGDDIPLHASTNLNMSHL
                     HINADDLHNFVLYEVEILLNQSSKSISDFALPSLPADLLADLANRLIMEERNYDRAVL
                     NIERLEIERQMNSKQKQIYNLITSASLNEQTEHVFVYGHGGTGKTFLWKAIITALRSR
                     GKIILAVASSSIASLLLPSRRTAHSRFKLPLVITDESMCNVKKITQMATLLQNTELIV
                     WDEAPMNDKRYFEALDRSLRDILGNTEEFFGRKSMILGGDFKQTLPIQTKGGKSTILG
                     ACITTSHLWQ"
     misc_feature    511..>1032
                     /gene="LOC139840848"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(598..618,832..834)
                     /gene="LOC139840848"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgcttttgt gccatcgaaa ggggtgcaag agctttgaag atattagaac agtcaaccag
       61 gtccttcata atacataccg gtctgcatgt gaagctgcta ggttactcgg tgatgatgga
      121 gagtggtcag cggtactaga agaagcatct gtatctgcca cgtcatctca gttacgttct
      181 cttttcgccc acattttgtc ttattgcact gttacgaacc cacttgctct ttgggaaaat
      241 cactggaaac taatgggtga tgatataccg cttcatgcat ctaccaattt aaatatgtcc
      301 cacttgcata taaatgccga tgacctacat aactttgtcc tgtatgaggt agagatcctt
      361 ttgaaccagt cttcgaaatc gatttccgat ttcgcattac cgtcactgcc agctgacctg
      421 ctcgcagatt tggcaaaccg tcttatcatg gaggagagaa actatgatcg tgcagtttta
      481 aacatcgaac gcctagaaat cgaacgtcaa atgaattcga aacaaaagca aatttacaat
      541 cttataacaa gcgcttcgtt gaatgaacaa actgaacatg tatttgtata tgggcacggt
      601 ggcaccggga agacattctt atggaaagcc ataatcacag cgctgagatc tagaggtaag
      661 ataattcttg ctgttgcatc atctagcatt gcatctctac ttctaccttc gagaagaacc
      721 gcacattctc gattcaaact accgctggtc ataaccgatg aatcgatgtg caacgtcaag
      781 aaaattaccc agatggcaac attactgcag aacacagaac ttattgtatg ggatgaggca
      841 ccaatgaatg ataagcgcta tttcgaagct cttgatagga gccttcgaga tattttagga
      901 aacactgaag aattttttgg gcgtaagtct atgatacttg gtggtgactt taaacaaacg
      961 ttaccaattc agacaaaagg agggaaatca actatccttg gtgcttgtat tacgacttca
     1021 catttgtggc agtga
//
LOCUS       XM_071831091            2687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TOC75-3,
            chloroplastic-like (LOC139840849), mRNA.
ACCESSION   XM_071831091
VERSION     XM_071831091.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2687
                     /gene="LOC139840849"
                     /note="protein TOC75-3, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139840849"
     CDS             52..2484
                     /gene="LOC139840849"
                     /codon_start=1
                     /product="protein TOC75-3, chloroplastic-like"
                     /protein_id="XP_071687192.1"
                     /db_xref="GeneID:139840849"
                     /translation="MASIAAGTGQFLNLRQRQSRQRQSLHRTNVSTLPSSTSVTTTST
                     IRCEQISSQNPRKPSKSGSSKSHLFTVKNLAISAAAGVLFHVACKNPNFSGIGGGNGG
                     GGAAGGGGGGGGGGGGGGGWWKRLLSPAANADENQSPEWDSHGLPADIIVQLNKLSGF
                     KKYKVSELVFLDKVKSITVGSEDSFFEMVSIKSGGVYTKAQLQKELETLATCGMFEKV
                     DLEAKTNADGTIGLTVSFTESTWEEADHFRCINVGLMQQSKSVDVEDNMTEKEKHDYM
                     RNQERDYRRRMERARPCMLPRAVHGEILQILAQGNVSARMLQNIRDRVQKWYHDEGYA
                     CAQVVNFGNLNTNEVVCEVVEGDITRVVIQFQDKLGNVCEGNTQVGVVKRELPKQLQK
                     GNVFNIEAGKQALRNINSLSLFSNIEVNPRPDEKNEGGIIVEIKLKELEQKSAEVSTE
                     WSIVPGRGGRPTLASIQPGGTVSFEHRNIKGLNRSLLGSVTTSNFLNPQDDLAFKLEY
                     VHPYLDGVSKSRNRTLRTSVFNSRKLSPVFTGGPGLDEVPPIWVDRAGIKTNITENFT
                     RQSKFTYGVVMEEITTRDESSHISSNGQRVLPNGGISADGPPTTLSGTGIDRMAFLQA
                     NITRDNTKFVNGAIVGERNVFQLDQGLGIGSKFPFFNRHQLTLTKFLQLKDVEEGAGK
                     PPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAELRIPV
                     RNTHVYAFAEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAIDHNSG
                     TGALFFRFGERF"
     misc_feature    415..2481
                     /gene="LOC139840849"
                     /note="Protein TOC75; Provisional; Region: PLN03138"
                     /db_xref="CDD:215598"
ORIGIN      
        1 acctacttac tcataaaccc caattctcaa tctctctccc tcttatctcc aatggcgtca
       61 atcgccgccg gcactggcca atttcttaac ctccgtcaac gtcagtctcg tcaacgtcaa
      121 tctcttcacc ggacaaacgt gtcaactctg ccgtcatcca cttctgttac cactaccagt
      181 acaatcagat gcgaacaaat ttcatctcaa aaccctcgca aaccctcaaa atcaggaagc
      241 tcgaaatcac atctgtttac cgtaaaaaat ctcgcaatct ccgcggctgc cggtgttttg
      301 tttcacgtcg catgtaagaa tcctaatttt tcaggtatcg gcggcggtaa tggaggcggt
      361 ggcgctgccg gaggtggcgg aggaggtgga ggcggcggag gtggtggagg aggatggtgg
      421 aagagactgc tatctccggc ggctaatgct gatgaaaatc agtcgcctga atgggattca
      481 catggtttgc ctgctgatat tatagttcaa ttgaataaac ttagtggatt caaaaagtat
      541 aaggtatctg agcttgtatt tttagataaa gtgaaatcga ttactgttgg ttcggaggat
      601 tcgtttttcg aaatggtttc gataaaatca ggtggtgtgt acaccaaagc tcagcttcaa
      661 aaagagcttg aaaccctagc tacttgtggt atgtttgaaa aagtagattt agaagcgaaa
      721 actaacgctg acggaacgat aggattgacc gtatcattta ctgaatccac ttgggaagag
      781 gctgatcact ttaggtgtat taatgttgga ttaatgcaac agtcgaaatc ggttgatgtg
      841 gaagataaca tgactgaaaa agagaagcat gattatatgc gaaatcagga acgcgattat
      901 aggagaagga tggaacgggc tagaccgtgt atgttgccac gtgcagttca tggtgagatt
      961 ttgcagatat tggcgcaagg gaatgtgagt gctagaatgt tgcagaatat tagggatagg
     1021 gttcaaaaat ggtatcatga tgaagggtat gcgtgtgctc aggttgtgaa ttttgggaat
     1081 ttgaatacga atgaagttgt ttgtgaggtt gtggaagggg atattactcg ggttgtgatt
     1141 cagtttcaag ataaacttgg aaatgtatgt gaagggaata ctcaagttgg agttgtgaag
     1201 agagaattgc ctaaacagct tcaaaaaggg aatgtcttta acattgaagc cgggaaacaa
     1261 gcattgcgta acattaattc actctcttta ttttcaaaca tcgaagttaa tccacgtcca
     1321 gatgagaaaa atgagggtgg aattattgtt gagattaagc ttaaagagct ggagcaaaaa
     1381 tcagctgaag tcagtactga atggagcatt gttcctggac gtggtggccg tcctactttg
     1441 gcttcaattc agcctggtgg aactgtttct tttgagcatc ggaacattaa ggggcttaat
     1501 agatctcttc ttggttctgt gacaacgagt aactttctta atcctcagga tgatcttgct
     1561 tttaagctcg agtatgtgca tccttacttg gatggtgtat ctaaatcccg aaaccgcact
     1621 ttgcgtacaa gtgtcttcaa cagtaggaag cttagtccag tcttcactgg tgggccagga
     1681 ctggatgaag ttccccctat atgggttgat cgagcgggta ttaaaactaa tatcaccgag
     1741 aatttcactc gtcaaagcaa gtttacatat ggggttgtaa tggaagagat aacaacacgt
     1801 gatgaaagca gtcatatttc ttcaaacggt caaagggtat tgccaaacgg tggtattagc
     1861 gcagatggtc ctccaacaac acttagtggg acgggtatag accgtatggc atttttacaa
     1921 gcaaatatta cacgtgacaa cactaagttt gtaaatggag caattgttgg cgagagaaac
     1981 gtgtttcagc ttgatcaagg tttagggata ggcagcaagt tcccgttttt caatcgccac
     2041 caactgacat tgacaaagtt cttacaacta aaagacgttg aagaaggtgc cggcaaaccg
     2101 ccacctcctg tccttgttct tcatggtcat tatggtggtt gtgtaggaga tcttcctagt
     2161 tatgatgcct ttactctcgg gggaccttat tccgttaggg gttacaacat gggagaaatt
     2221 ggtgctgcta gaaatattct tgagcttgcg gctgaattac gtataccagt gagaaacact
     2281 cacgtatacg catttgcaga gcatgggaat gatttgggga gctcaaaaga cgtaaaggga
     2341 aacccgactg aggtgtatag acgaatgggt catggctcat cttatggtgt tggtgccaaa
     2401 cttggtttag tacgagcaga atatgcaatc gatcacaact cagggactgg tgctttattt
     2461 ttcaggtttg gagaaaggtt ttaatactta tttagatttg ttctcgatcc gggatttaga
     2521 ccatgttttt caggttttac tttaaactcg agtttagttc ttaatctggt tttttgaatt
     2581 tggtagaaag ttaacctgtg tgaaataata tttaaaacca taaggttaag tgtagatttc
     2641 tgttcaggaa ctcccaatgg ttgaatttca tgattgtgtt tttatca
//
LOCUS       XM_071831092             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cell number regulator
            10-like (LOC139840851), mRNA.
ACCESSION   XM_071831092
VERSION     XM_071831092.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139840851"
                     /note="cell number regulator 10-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840851"
     CDS             1..570
                     /gene="LOC139840851"
                     /codon_start=1
                     /product="cell number regulator 10-like"
                     /protein_id="XP_071687193.1"
                     /db_xref="GeneID:139840851"
                     /translation="MYHSSNKNGYMKLSANANLPSSKAEHDAYVEHENTDPWSSGLCD
                     CFSDVELCCLTCWLPYVTFGRIAEAVDDGNTCNAFFASCSKLFHEFDPLKGPCVLSGA
                     IHALLTYFTGYGWKYSCAYRSKMRIKYKLDGSPCQDCLIHSCCMTCALCQEYRELQFR
                     GVIVSQHEDDDQKNIGIEAVPVAPKGMIR"
     misc_feature    112..468
                     /gene="LOC139840851"
                     /note="PLAC8 family; Region: PLAC8; pfam04749"
                     /db_xref="CDD:461417"
ORIGIN      
        1 atgtatcatt cttcaaacaa aaatggctac atgaaacttt cggcaaatgc aaatctacca
       61 tcttcaaaag ccgaacatga tgcatatgta gaacatgaaa acactgatcc ttggtcctct
      121 ggcttgtgtg actgtttctc cgacgtcgag ctttgttgct taacatgttg gctaccttat
      181 gttacttttg ggcgcattgc agaggccgtt gacgatggca atacatgtaa cgcatttttc
      241 gcttcatgtt ccaaactatt tcatgagttt gatccactaa aaggaccttg cgttcttagt
      301 ggagcgattc atgcattatt aacgtatttt acggggtatg ggtggaagta ttcatgcgcg
      361 tatcgctcaa aaatgaggat taagtataag ttagatggca gcccttgcca ggactgtttg
      421 attcattcat gttgcatgac atgtgcttta tgtcaagagt accgtgagct tcaatttcgc
      481 ggtgtcattg tttctcaaca tgaagatgat gaccagaaga atattggaat agaggctgtg
      541 ccagtggctc ctaagggaat gatccgttaa
//
LOCUS       XM_071831094             687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139840852), mRNA.
ACCESSION   XM_071831094
VERSION     XM_071831094.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..687
                     /gene="LOC139840852"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139840852"
     CDS             1..687
                     /gene="LOC139840852"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687195.1"
                     /db_xref="GeneID:139840852"
                     /translation="MEDDVELVDKGQYQRIVEKLIYIAHTRPDIAHAVGVVSQFMHHP
                     QVHHLKAAMRIIRYLKKTPYDNLEIYDASWAGEKGDRRSTSGFFTIVGGNLVAWRSNK
                     QKVVSLSSAESEFRGIAKGMVEALRIKKLLTEIGFPPKETIQIFYDNEAAIAISENPV
                     QHDRTKHVEIDRHFIREKLDGEIISLPSIRSEDQLADILTKSVNGRLFSEVFGKLNIE
                     NPTIQLEVEC"
     misc_feature    211..615
                     /gene="LOC139840852"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(211..222,325..333,340..342,442..444,520..522,
                     601..603)
                     /gene="LOC139840852"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggaagatg atgttgagct agtagataaa ggacaatacc aaaggatagt ggaaaaactc
       61 atttatattg ctcacactcg accagatata gcacatgcag taggagttgt aagccaattt
      121 atgcatcacc cacaagttca tcatttgaaa gctgcaatga ggattatccg atatctaaag
      181 aagacaccat atgacaacct ggaaatttac gatgcaagtt gggctggaga aaaaggagat
      241 agaagatcta catcgggttt ctttacaata gtcggaggaa acttagttgc atggagaagc
      301 aataaacaaa aagttgtttc tctatcaagt gcagaatcag aatttagagg tatagcaaaa
      361 ggcatggtcg aagccttgag gataaagaaa cttttgacag aaattggatt cccgccaaaa
      421 gaaactattc aaatctttta tgacaatgaa gccgcaattg ccatctcgga gaaccctgtt
      481 caacatgacc gaactaaaca tgttgaaatt gatcgacact ttatcagaga gaagttagat
      541 ggtgaaatca tttctctacc atcaatcaga tcagaagatc agctagccga catcctcacc
      601 aaatcagtca acggaagact ctttagcgaa gttttcggca agttgaacat tgaaaacccc
      661 actattcaac ttgaggtaga gtgttag
//
LOCUS       XM_071831095            1224 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840853), mRNA.
ACCESSION   XM_071831095
VERSION     XM_071831095.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1224
                     /gene="LOC139840853"
                     /note="uncharacterized LOC139840853; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840853"
     CDS             1..1224
                     /gene="LOC139840853"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687196.1"
                     /db_xref="GeneID:139840853"
                     /translation="MDAFISKMRKIVEVQNKSIGALAKEIGNVVESKGNWEPSTIPSY
                     TVLNPNHKEQGKGHSVNMVGTLRSGKKHDNKVGEKEVVQQESSEVPIVLDEDEVSEND
                     NHGKGVKNKEPIVNETEKLETESKTVPFPKALESPNQFPYGKMGPQPEDMWETFKKVK
                     INFPLLDAIRQVPSYTKFLKDLCTQKRKQRATLPKKVELTEHLSAVVSGTLPPKFKDP
                     GTPLIAVTIGNVNVKKALLDLVTSINILPFCLVDLFELGLMKRTDIIIQLADQSIKTP
                     RGILEDLIVKVEDFYYPVDFVVMDIESRNRDAQPTIILGRPFLATINAHINCRMGSMD
                     ISFGNRKMRINIFNSLHAPNVHECYQVDVIDELVEKHTSHLITNDPVEVFCLGDEEDV
                     ECEEVKAVELAIASM"
     misc_feature    667..960
                     /gene="LOC139840853"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(712..714,718..720,724..726,796..804,937..939)
                     /gene="LOC139840853"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    712..720
                     /gene="LOC139840853"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    712..714
                     /gene="LOC139840853"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(796..807,817..828)
                     /gene="LOC139840853"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggacgcgt ttatctccaa aatgcgtaaa atagtggaag tgcaaaacaa gtcaattggt
       61 gcgttggcta aggagattgg taatgtagta gaaagtaaag ggaattggga gccgagtaca
      121 attccaagct acacggttct aaatccgaat cataaggaac aaggaaaagg gcatagtgtt
      181 aatatggtag gcaccttgcg aagtggaaag aagcatgaca ataaggttgg tgaaaaagag
      241 gtagtgcaac aagagtcaag tgaggttcct attgtgcttg atgaggatga ggtaagtgaa
      301 aatgataacc atggaaaggg ggtgaaaaat aaggaaccaa tcgttaatga gaccgagaaa
      361 ttggagacgg aatcaaaaac cgtcccattt cccaaggcct tagagtcccc aaaccaattc
      421 ccttatggga agatgggacc acaaccggag gacatgtggg aaacatttaa aaaggttaag
      481 attaattttc cccttctcga tgctattagg caagtcccgt cttatactaa atttttgaag
      541 gacctttgca ctcaaaagag gaagcaaagg gcgaccttac caaaaaaggt ggagctaacc
      601 gagcacctaa gtgcggttgt ttcaggaaca cttccaccta aatttaagga cccggggacc
      661 ccattgatag cggttactat aggaaacgtg aatgtgaaaa aggcgttatt ggacctagta
      721 actagcatca atattttacc tttttgtcta gttgacctat ttgaattggg tttaatgaaa
      781 agaaccgaca taattattca actagcagac caatcaatca aaacacctag ggggatatta
      841 gaagatttga tagtaaaagt ggaggatttc tattaccctg ttgactttgt tgtgatggat
      901 attgaatcta ggaatagaga tgcccagccc actataatct tggggcgccc tttcttggcc
      961 accataaatg cccacattaa ttgtcgaatg ggttccatgg acatatcatt cgggaatcgc
     1021 aagatgagga ttaatatctt taattctctt cacgccccaa atgtccatga atgctatcag
     1081 gtagatgtga ttgatgaact agtggaaaaa catacttctc acctaataac caatgacccg
     1141 gtagaagtat tttgcttagg tgatgaagag gatgttgaat gtgaagaggt taaggcagtc
     1201 gaattagcta tagcaagtat gtga
//
LOCUS       XM_071831096            1323 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840854), mRNA.
ACCESSION   XM_071831096
VERSION     XM_071831096.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1323
                     /gene="LOC139840854"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840854"
     CDS             1..1323
                     /gene="LOC139840854"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687197.1"
                     /db_xref="GeneID:139840854"
                     /translation="MNNKQLELDLYTIVAHLSPSIRSHEGVESISCVRMIELCMSHSN
                     FHNFADTSLKYKARLVANGRSQQIGIDCDETFSPIVKSATIRTVLSLAASRHWPIHQL
                     DVKNAFLHGTLSVTIYVHQPPGFRDPSRPDHVCLLQKSLYGLKQAPRAWFQRFAGYAQ
                     RVGFQHGRCDTSLFIYKHGADTAYLLLYVDDIILTASSTVFLHRIITSLHQVFSMNDL
                     GPLNYFLGISVTRTPAGMFLSQKKYTYEIIERADMVGCNSSRTPIDIGTKLTIAGPPV
                     KDPTLYRNLAGALQYLTFTRPDISYAVQQICLFMHDPREPHMAALRRIIRYIQGTLDL
                     GLQLFSSSTCSLVAYSDADWAGCPSTRRSTSGYCVFLGNNLLSWSSKRQQTPSRSSAE
                     AEYRGVTNAVVETCWIRNLLRELHCPLSSATLVYCDNVSAVYMSGNPV"
     misc_feature    160..789
                     /gene="LOC139840854"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    1039..>1320
                     /gene="LOC139840854"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(1051..1062,1165..1173,1180..1182,1282..1284)
                     /gene="LOC139840854"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaataaca aacagctcga actcgattta tacacgattg ttgcccacct atccccctcc
       61 atacgatcgc atgaaggtgt agagagtata tcatgcgttc gcatgattga actatgcatg
      121 tcacattcga acttccataa ttttgccgac acttcactta agtataaggc tcgacttgtc
      181 gctaatggtc gaagccagca gattggtatt gattgtgatg agactttcag cccgattgta
      241 aaatcggcca ctattaggac tgtactcagt cttgctgcat ctcgacactg gcccattcat
      301 cagcttgatg tcaagaatgc atttcttcac ggtactctct ctgtgaccat ctacgtgcat
      361 cagccccctg gtttccgcga ccctagtcgt cccgatcatg tctgcctttt gcagaaatct
      421 ttatacggat tgaaacaagc tcctcgagct tggtttcagc gatttgccgg gtatgctcag
      481 cgtgttggat tccagcacgg tagatgtgac acctctttgt tcatctacaa gcacggcgcg
      541 gacacagcct atttgttact atatgtggac gacatcatct tgactgcctc gtctacagta
      601 tttcttcatc ggattatcac ctctttacat caggtgtttt ccatgaatga tcttggcccg
      661 ttaaattatt ttcttggcat ttctgttact cgtactcctg ctggtatgtt tctctctcag
      721 aagaagtaca catatgaaat cattgaacgt gcagacatgg ttggttgtaa ttctagtcgc
      781 acaccgatcg atattggcac caaactgacc attgctggtc ccccagttaa ggatcccact
      841 ttatatcgca accttgctgg tgctctccag tatctcactt ttaccaggcc cgacatctct
      901 tatgctgtcc aacagatctg cttgtttatg catgatcctc gagagcctca tatggctgct
      961 ctccgaagga tcattcgcta tatccagggc actctggatc ttggtctaca gttgttttca
     1021 tctagcactt gctcattggt tgcttattct gatgctgatt gggctggttg tccctctact
     1081 cgccgctcta catctggata ctgtgtattt ttgggtaata atcttctatc ttggtcctct
     1141 aaacggcaac agactccgtc acgctccagt gccgaagctg aataccgtgg tgtcaccaac
     1201 gccgttgtag agacatgctg gattcgtaat cttctacgcg agctccattg tccgctttca
     1261 tctgctactc ttgtctattg tgacaacgtt agtgctgttt acatgtctgg caacccggtg
     1321 taa
//
LOCUS       XM_071831097             426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840855), mRNA.
ACCESSION   XM_071831097
VERSION     XM_071831097.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..426
                     /gene="LOC139840855"
                     /note="uncharacterized LOC139840855; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840855"
     CDS             1..426
                     /gene="LOC139840855"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687198.1"
                     /db_xref="GeneID:139840855"
                     /translation="MPIPSSDVVLGMNWLKDHKASIKCHRMIISFLVTSGKRVVACSD
                     RIGFCCPLLSMMKAQKSSAKGCDSFLVYVTVVKKEDKVVSDIFVVSEYPEVFPDELLG
                     LPPIRKVEYKIELVPGATSVAKALYRLALSEIREMMPQI"
     misc_feature    <1..93
                     /gene="LOC139840855"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atgcctatac caagctctga tgtagtgtta ggcatgaatt ggcttaagga ccataaggcc
       61 agtattaagt gccataggat gattatctct tttcttgtga ctagtgggaa acgggtagtg
      121 gcttgcagtg atcggatcgg gttctgttgt ccgttattgt cgatgatgaa agctcagaaa
      181 tcttcggcca agggatgtga ttctttctta gtttatgtga ccgttgtaaa gaaggaagat
      241 aaggtagtgt ccgatatttt cgtagtgtct gaatatccgg aagtgttccc cgatgaattg
      301 ttaggcttac cgccgatcag gaaagttgaa tataagatcg aattagtgcc aggggctacg
      361 tcggttgcca aagctctgta tagattagct ctttcagaaa ttcgtgaaat gatgccccaa
      421 atttaa
//
LOCUS       XM_071831098             702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides FAS1 domain-containing
            protein SELMODRAFT_448915-like (LOC139840856), mRNA.
ACCESSION   XM_071831098
VERSION     XM_071831098.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139840856"
                     /note="FAS1 domain-containing protein
                     SELMODRAFT_448915-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840856"
     CDS             1..702
                     /gene="LOC139840856"
                     /codon_start=1
                     /product="FAS1 domain-containing protein
                     SELMODRAFT_448915-like"
                     /protein_id="XP_071687199.1"
                     /db_xref="GeneID:139840856"
                     /translation="MANYVKIYVSVLIITFMISSMAYAVSNITRNNDIEVAIEEMERA
                     NYFTFVMLINMVPSDLFQGGVTFLVPSDESLSRITMPPNNVTDLLLRHSIPSPLLFDH
                     LLHLPTNSMLPTSNPELMVKVFNSGRMGLFLGNVRIVSPNVCTHGDSVRCHGIDRVLN
                     VDDEQYGPTSSISCPRIVAPIPAPAPSLAPPGLVPTFDPPQSETSSGGTPHVGLELAF
                     MSYLWVLYSISVSLV"
     misc_feature    196..477
                     /gene="LOC139840856"
                     /note="Four repeated domains in the Fasciclin I family of
                     proteins, present in many other contexts; Region: FAS1;
                     smart00554"
                     /db_xref="CDD:214719"
ORIGIN      
        1 atggcgaatt atgtcaaaat atatgtttct gttcttatca taaccttcat gatctcatca
       61 atggcttacg ccgttagtaa tatcacacga aacaatgaca ttgaagtagc aattgaagaa
      121 atggagagag ccaattactt cacgttcgtc atgcttataa acatggttcc gtctgatttg
      181 tttcaaggag gtgtcacatt tttggttccg agtgatgaat cactttcaag aattacgatg
      241 cctccaaata atgtaacgga tcttttgctt cgccattcaa ttccatcccc tttgcttttc
      301 gatcatcttc ttcatttgcc cacaaatagc atgcttccta catccaaccc tgagttgatg
      361 gttaaggttt tcaatagtgg tagaatgggt ttgttccttg gcaacgttag aatcgttagt
      421 cctaatgtat gcacacatgg cgactcggtg aggtgtcatg gtatagatcg tgttcttaat
      481 gtagacgatg agcaatatgg acctacttca tcgattagtt gtcctagaat tgtagctccg
      541 attccagcac ccgcaccatc tttagcacct cctggtttgg ttcctacatt cgatccaccc
      601 caatctgaaa cttcaagcgg tggaacaccg catgtggggt tagaattggc gtttatgtcg
      661 tatttgtggg tattatatag tatatcggtg agcttggttt ag
//
LOCUS       XM_071831100            1668 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840858), mRNA.
ACCESSION   XM_071831100
VERSION     XM_071831100.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1668
                     /gene="LOC139840858"
                     /note="uncharacterized LOC139840858; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840858"
     CDS             1..1668
                     /gene="LOC139840858"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687201.1"
                     /db_xref="GeneID:139840858"
                     /translation="MGDSSQTQHNQIAELTSQLAKLFQTNLESQSQRLSDSLKINVSL
                     NNSNFALWSRMIKVAIGGKSDALLNHLTEDPTDSKNQKWIQEDLVVFSWLIQNIEPQI
                     ASNLTQFPTAKALWNALVTTYSSGKDKLQTFDLYVKANNIKQEGKSVEELWLKLQGIW
                     GEIEMRDPNPMEHPNDIIKYNNIRSKQKLFQFLNALDQKHDNIKRELLRIEPLPSVEA
                     AYAAIRKENAHQTIFGTRTDIPTHSGIASGLVAPASRSKESDGHGLISKNHRRSDYSS
                     SSRDRDNLKCDECGMKRHTKEQCFKVIGYPEWWNNGHKKGKAAIVTPVAATGGNQQAN
                     NSGTTTKAGFGLLTETNAGHQNGEIIGRGTECDGLYYVDEVTQDSNVLLAHGTPDRQA
                     WLWHRRLGHPSSSYLSILFPNLFSSNKTLQCETCILAKSHQNSYKTSNTKTERPFALV
                     HSDVWGPARVNGGHNFRYFLLFIDDCTRMTWTFFKKNKSEVFDKFTMFFNMIQTQFKS
                     TIQILRSDNGGEFFNSQMSLFCEKHGIIHQTTCPHTPQQNGVAERKN"
     misc_feature    1102..1293
                     /gene="LOC139840858"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    <1324..1659
                     /gene="LOC139840858"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgggtgaca gcagccaaac tcaacacaat caaattgctg aattaaccag ccaattggct
       61 aagttatttc aaacaaacct ggaatctcaa tcacaaaggc tttctgattc attgaagatc
      121 aatgttagcc tcaacaattc aaactttgct ctttggtcta ggatgatcaa ggttgcaata
      181 ggaggtaaat cagatgccct cctcaatcat ctcactgaag atccaacaga cagtaagaac
      241 cagaaatgga tccaagaaga ccttgtggtt ttctcatggc ttattcaaaa tattgagcca
      301 cagattgcaa gcaacttaac tcaatttcca acagcaaaag ctctctggaa tgcccttgtt
      361 acaacctata gttcaggaaa agataagctg cagaccttcg acctctatgt aaaagcaaac
      421 aacatcaaac aagaaggtaa gtcagtagag gaactatggc ttaaattaca gggtatttgg
      481 ggggaaattg agatgaggga tccaaatccc atggaacatc ccaatgatat tatcaaatac
      541 aataacattc ggtctaaaca aaaactattt cagtttttaa atgcattaga tcagaaacat
      601 gataatatca aaagagaact attgagaatc gaaccattac catctgttga agcagcatat
      661 gctgccattc gtaaagagaa tgcccaccaa accatctttg gtactcgaac cgatattcct
      721 acccattccg gcatcgcttc aggccttgtt gctccggcat caagatcaaa agagtctgat
      781 ggccatggcc ttatatctaa aaatcaccgc cggtcagact attcgtcatc atcccgggat
      841 cgagacaatc tgaaatgcga cgaatgtggc atgaaaaggc atacgaagga gcaatgtttc
      901 aaggtcatag gataccctga gtggtggaac aacggccata aaaaaggaaa agctgcaatt
      961 gtaacaccgg tggcggctac cggaggtaac caacaggcca acaactccgg caccaccacc
     1021 aaagcaggtt tcggattact cactgagaca aatgcaggac atcagaacgg ggagataatt
     1081 ggtcgtggta ctgaatgtga tgggttatac tatgttgatg aggttactca agacagtaat
     1141 gttctactag ctcacgggac ccctgacaga caagcttggt tatggcatag acgtcttggt
     1201 catccttctt ctagctattt aagtatttta tttccgaatt tgttttcttc aaataaaaca
     1261 cttcagtgtg aaacatgtat tctggccaaa agccaccaaa actcttataa aacgagtaat
     1321 acaaaaactg aacgtccttt tgctttagtt cattctgatg tatggggacc tgcgagggta
     1381 aatgggggcc ataactttcg atattttctg ttatttatcg atgattgtac tcgtatgacg
     1441 tggacatttt ttaaaaaaaa caaatctgag gtctttgaca aattcaccat gttttttaac
     1501 atgattcaaa ctcaatttaa aagtacaata caaattcttc gatccgacaa tggtggtgaa
     1561 tttttcaact cccaaatgag tcttttttgt gaaaaacatg gcattattca tcaaactacg
     1621 tgtccacata ctcctcaaca aaatggggtg gcagaaagga aaaattga
//
LOCUS       XM_071831101            1224 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein SKIP19-like
            (LOC139840859), mRNA.
ACCESSION   XM_071831101
VERSION     XM_071831101.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1224
                     /gene="LOC139840859"
                     /note="F-box protein SKIP19-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840859"
     CDS             1..1224
                     /gene="LOC139840859"
                     /codon_start=1
                     /product="F-box protein SKIP19-like"
                     /protein_id="XP_071687202.1"
                     /db_xref="GeneID:139840859"
                     /translation="MKSRQRGDSDSAKLTKASTSKSNRRKRKLTDFQLEPAPEHNPRE
                     TMKADQANKVTNASTLKSNRRKGKKSKFVSKPKRIWQVKNPTVNWLELPEDLTANILQ
                     RIGVFDILQNAEKVCTTWRKICKDPCMWRVISMDNQGELRDRALRRPLCIKICKLVAD
                     RSQGQLVDLSIHDFGRYELLRDISDRSSQLKRLQLIRCRGGMYTHWGVFLRKFPLLEE
                     ISTEYTCLCDKDFEDVGRYCPLLKTFKLNAVFPILADKEDDDDANELAIIIAKNLPNL
                     SHLELIGNTMTNNGLQAILDGCTHLESLDIRHCFYLDLKKDEIGKRCLERIKHVKLPN
                     DSLEEGGICIFYVGDYHYDKLMEPSSDVSCESGISFDDSEYDDYYYDYGSDDGSINTY
                     DPQECNDYVNLYYSR"
     misc_feature    262..399
                     /gene="LOC139840859"
                     /note="F-box domain found in Arabidopsis thaliana
                     SKP1-interacting partner 19 (AtSKIP19) and similar
                     proteins; Region: F-box_AtSKIP19-like; cd22164"
                     /db_xref="CDD:438935"
     misc_feature    order(274..276,286..288,295..300,307..312,322..324,
                     328..333,346..354,358..360)
                     /gene="LOC139840859"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438935"
     misc_feature    568..645
                     /gene="LOC139840859"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    646..720
                     /gene="LOC139840859"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    721..825
                     /gene="LOC139840859"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    826..900
                     /gene="LOC139840859"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 atgaaaagcc gacaaagagg tgatagtgat agtgctaaac tgacaaaggc atcaacgtca
       61 aaatcaaata gacgtaaacg aaaacttact gacttccaat tggagccagc tcccgaacat
      121 aatcccagag aaacgatgaa agctgaccaa gctaataaag tgacaaatgc atcaacatta
      181 aaatcgaatc gtcgaaaagg aaagaaatcc aagtttgttt caaaacccaa acggatttgg
      241 caggtgaaga atccaactgt aaattggtta gagctcccag aagatttaac agccaatata
      301 ctacaaagaa ttggtgtgtt tgatatactt caaaatgctg agaaagtttg cacaacttgg
      361 cgaaaaattt gcaaggaccc ttgtatgtgg agggttatat ctatggacaa ccaaggtgaa
      421 ttgagggatc gggcattacg taggccatta tgtataaaga tatgtaaact tgttgctgat
      481 agaagccaag gccaattggt tgatctctct atccatgatt ttggtagata cgagcttctt
      541 cgagatattt cggacagatc aagccagctt aaacgtctac aactcatacg ttgccgaggt
      601 ggaatgtaca cacactgggg tgtttttctt agaaaatttc cattattgga ggaaatcagt
      661 accgagtata catgtctttg tgataaagat tttgaagatg ttggacgtta ttgtcccttg
      721 ctaaaaacat tcaaactgaa tgcagtattc cctatacttg ccgataaaga agatgatgat
      781 gatgcgaacg aacttgccat aattattgct aaaaatttac ctaatttaag ccacctcgaa
      841 ctcatcggaa acaccatgac caataatggg ttgcaggcga ttttggatgg ttgtactcat
      901 cttgaatccc ttgacattcg ccattgtttc tacctcgatc taaaaaaaga tgaaattgga
      961 aaaagatgtt tagaaaggat taaacatgta aaacttccta atgattcact ggaagaaggg
     1021 ggtatatgca tcttttatgt tggtgattat cattatgata agctgatgga gccaagtagt
     1081 gatgtttctt gtgaatctgg gatatctttt gatgattctg agtatgatga ttattattat
     1141 gattatggtt ctgatgatgg cagtatcaat acttatgacc ctcaggaatg caatgactat
     1201 gtgaacttat actactcgcg ttaa
//
LOCUS       XM_071831102            1675 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor IIA large subunit-like (LOC139840860), transcript variant
            X1, mRNA.
ACCESSION   XM_071831102
VERSION     XM_071831102.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1675
                     /gene="LOC139840860"
                     /note="transcription initiation factor IIA large
                     subunit-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139840860"
     CDS             149..1387
                     /gene="LOC139840860"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071687203.1"
                     /db_xref="GeneID:139840860"
                     /translation="MAGSTSTSGVYIQVIEDVINKVRDEFINNGGPGEGVLSELQGLW
                     ELKMMQAGAIVGPIDRSAGVNSMVPGAGSNTVHDLNVPYEGADEYETPTADMLFPPTP
                     MQTPLPGQTPLPGTAPTPLPGTMDNSYNIATGGTPITPSDYSSVNENGAADKVGRPST
                     FMQPPSPWLNQRPNLDVNIGKISFSADIIYMHDLNVLFSKLDIVAAYVEGREDPERVA
                     ASQPTTQDFFLLSGKRKRDEFPPQYRPGGFIPQQDGAADVIADTFEVGQSSNPQHGHG
                     LALSSRIPQLDGPIPDPYDESLSTPNIYNYQGVVNEDYNVANTPAPQELQAPTPAMVN
                     QNDLLDDDDEEPLNENDDDDDLDDVDQGEELNTHHLVLAQFDKVTRAKSRWRCTLKDG
                     IMHINNKDVLFNKATGEFDF"
     misc_feature    176..1384
                     /gene="LOC139840860"
                     /note="Transcription factor IIA, alpha/beta subunit;
                     Region: TFIIA; pfam03153"
                     /db_xref="CDD:460829"
     misc_feature    <1247..1384
                     /gene="LOC139840860"
                     /note="Precursor of TFIIA alpha and beta subunits and
                     similar proteins; Region: TFIIA_alpha_beta_like; cd07976"
                     /db_xref="CDD:199899"
     misc_feature    order(1277..1279,1286..1288,1292..1294)
                     /gene="LOC139840860"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:199899"
     misc_feature    order(1286..1288,1382..1384)
                     /gene="LOC139840860"
                     /note="TBP interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:199899"
ORIGIN      
        1 cgtctttatt cctttttctg ctctgctatc cccccaatct caatcgttgt acacttccaa
       61 gccctaatta aaatcttcca tcaattcacc ttctcaattc ctaaattagg gtttctattt
      121 cactcctaaa gttttaccga tcatcgtaat ggccggttcc acctccacca gcggtgttta
      181 tatccaagta attgaagacg tcatcaacaa agttcgtgac gaatttatca acaatggtgg
      241 tccaggtgaa ggcgttctca gcgaacttca aggattatgg gagttgaaga tgatgcaagc
      301 tggggcgata gttggtccta ttgatagatc tgctggggta aactcgatgg tgcctggggc
      361 tggttcaaac acggttcatg atctcaatgt gccctacgaa ggggcagatg agtatgagac
      421 tcctactgct gatatgctat tccctcctac tccaatgcaa acgcctttgc ctggccaaac
      481 accactaccg gggactgctc ctacaccttt accggggaca atggacaatt catacaacat
      541 agctactgga ggtactccca ttacgccaag tgattattcc tctgtaaacg agaatggagc
      601 tgcagacaaa gttgggcggc ctagcacatt catgcaacca ccatctccat ggttgaacca
      661 aaggcctaat ctcgatgtga atatcggtaa aatctctttc agtgctgata ttatatacat
      721 gcatgattta aatgtgctat tttctaaact ggatattgtt gcagcctacg tggaaggccg
      781 tgaagatcct gaaagagtag cagcaagtca accaacaacc caggatttct ttcttttatc
      841 tggaaagcgt aagcgggatg agtttcctcc tcaatatcgt ccaggtggat ttattcctca
      901 gcaagatgga gctgcagatg tgatagctga tacatttgag gttggtcaaa gcagcaatcc
      961 tcaacatggt catggacttg cgctgtcttc taggattcct caactggatg gacctattcc
     1021 tgatccctat gatgaatcac tttctacacc aaatatatac aactatcaag gagttgtaaa
     1081 tgaagactat aatgtagcaa acaccccagc tccacaagag ctacaagcac caactcctgc
     1141 tatggttaat caaaatgatc ttttagatga tgatgatgaa gagcctttga atgaaaatga
     1201 tgacgatgat gatcttgatg atgtggacca aggcgaggag ctaaatactc atcatttggt
     1261 tttggctcag ttcgacaagg tgactcgtgc aaagagcagg tggaggtgca ctctcaagga
     1321 tggcattatg catataaaca acaaagatgt tctgttcaac aaggcaactg gggagttcga
     1381 cttctgatta tgggagagat ctgagcacta gtcaaccaag ggcgtagagc tatcatcgga
     1441 taattaaagt agtgatcgtc tcttttaagt gaagaatctg aactcaattg acgtaattga
     1501 tgtttatgat gtgaaaaggc ctacctgatg tatataaaga tgaaagagtt ttttgtttgg
     1561 ccctagtatt tattggctat ctttagtccc atgaaaaaac acacatgtat ttcatgggac
     1621 aagtaattca ggttataccc ttcgggtttt ggtgaacctt ttacattaaa ctgca
//
LOCUS       XM_071831103            1597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor IIA large subunit-like (LOC139840860), transcript variant
            X2, mRNA.
ACCESSION   XM_071831103
VERSION     XM_071831103.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1597
                     /gene="LOC139840860"
                     /note="transcription initiation factor IIA large
                     subunit-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins"
                     /db_xref="GeneID:139840860"
     CDS             149..1309
                     /gene="LOC139840860"
                     /codon_start=1
                     /product="transcription initiation factor IIA large
                     subunit-like isoform X2"
                     /protein_id="XP_071687204.1"
                     /db_xref="GeneID:139840860"
                     /translation="MAGSTSTSGVYIQVIEDVINKVRDEFINNGGPGEGVLSELQGLW
                     ELKMMQAGAIVGPIDRSAGVNSMVPGAGSNTVHDLNVPYEGADEYETPTADMLFPPTP
                     MQTPLPGQTPLPGTAPTPLPGTMDNSYNIATGGTPITPSDYSSVNENGAADKVGRPST
                     FMQPPSPWLNQRPNLDVNIAYVEGREDPERVAASQPTTQDFFLLSGKRKRDEFPPQYR
                     PGGFIPQQDGAADVIADTFEVGQSSNPQHGHGLALSSRIPQLDGPIPDPYDESLSTPN
                     IYNYQGVVNEDYNVANTPAPQELQAPTPAMVNQNDLLDDDDEEPLNENDDDDDLDDVD
                     QGEELNTHHLVLAQFDKVTRAKSRWRCTLKDGIMHINNKDVLFNKATGEFDF"
     misc_feature    176..1306
                     /gene="LOC139840860"
                     /note="Transcription factor IIA, alpha/beta subunit;
                     Region: TFIIA; pfam03153"
                     /db_xref="CDD:460829"
ORIGIN      
        1 cgtctttatt cctttttctg ctctgctatc cccccaatct caatcgttgt acacttccaa
       61 gccctaatta aaatcttcca tcaattcacc ttctcaattc ctaaattagg gtttctattt
      121 cactcctaaa gttttaccga tcatcgtaat ggccggttcc acctccacca gcggtgttta
      181 tatccaagta attgaagacg tcatcaacaa agttcgtgac gaatttatca acaatggtgg
      241 tccaggtgaa ggcgttctca gcgaacttca aggattatgg gagttgaaga tgatgcaagc
      301 tggggcgata gttggtccta ttgatagatc tgctggggta aactcgatgg tgcctggggc
      361 tggttcaaac acggttcatg atctcaatgt gccctacgaa ggggcagatg agtatgagac
      421 tcctactgct gatatgctat tccctcctac tccaatgcaa acgcctttgc ctggccaaac
      481 accactaccg gggactgctc ctacaccttt accggggaca atggacaatt catacaacat
      541 agctactgga ggtactccca ttacgccaag tgattattcc tctgtaaacg agaatggagc
      601 tgcagacaaa gttgggcggc ctagcacatt catgcaacca ccatctccat ggttgaacca
      661 aaggcctaat ctcgatgtga atatcgccta cgtggaaggc cgtgaagatc ctgaaagagt
      721 agcagcaagt caaccaacaa cccaggattt ctttctttta tctggaaagc gtaagcggga
      781 tgagtttcct cctcaatatc gtccaggtgg atttattcct cagcaagatg gagctgcaga
      841 tgtgatagct gatacatttg aggttggtca aagcagcaat cctcaacatg gtcatggact
      901 tgcgctgtct tctaggattc ctcaactgga tggacctatt cctgatccct atgatgaatc
      961 actttctaca ccaaatatat acaactatca aggagttgta aatgaagact ataatgtagc
     1021 aaacacccca gctccacaag agctacaagc accaactcct gctatggtta atcaaaatga
     1081 tcttttagat gatgatgatg aagagccttt gaatgaaaat gatgacgatg atgatcttga
     1141 tgatgtggac caaggcgagg agctaaatac tcatcatttg gttttggctc agttcgacaa
     1201 ggtgactcgt gcaaagagca ggtggaggtg cactctcaag gatggcatta tgcatataaa
     1261 caacaaagat gttctgttca acaaggcaac tggggagttc gacttctgat tatgggagag
     1321 atctgagcac tagtcaacca agggcgtaga gctatcatcg gataattaaa gtagtgatcg
     1381 tctcttttaa gtgaagaatc tgaactcaat tgacgtaatt gatgtttatg atgtgaaaag
     1441 gcctacctga tgtatataaa gatgaaagag ttttttgttt ggccctagta tttattggct
     1501 atctttagtc ccatgaaaaa acacacatgt atttcatggg acaagtaatt caggttatac
     1561 ccttcgggtt ttggtgaacc ttttacatta aactgca
//
LOCUS       XM_071831104             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840861), mRNA.
ACCESSION   XM_071831104
VERSION     XM_071831104.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139840861"
                     /note="uncharacterized LOC139840861; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840861"
     CDS             1..903
                     /gene="LOC139840861"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687205.1"
                     /db_xref="GeneID:139840861"
                     /translation="MNGTFHKSLKNPNCDVLKKLDRVLVNEEFTSKFGRAHAIFHPYL
                     ISDHSPAVLVIPDGIVCKPKSFRFMNYIADKPEFIPLVENVWKKVVNGVPMFKVVQKL
                     KALKKDLNFLNWQNGNIFSKVKDLKQKLKVAQAEVDDNPFDKTVKAEAVKLLNEYRDA
                     CKDEMKILKQKVRVKWLEDGDKNSKYFHSILKSRKSKSRVESICNDHGQRFFGGEVAD
                     QIVEHFKKNLGSSSNTQPVEDLGDIFTKVLSAEEANSMVVEVTNAEIKEALFDIDSNK
                     ASGPDGYTARFFKKAWPVVEMIYV"
ORIGIN      
        1 atgaacggga catttcataa atctctgaaa aaccctaatt gtgatgtgtt aaaaaagctg
       61 gatagggttt tagttaatga agagttcaca agtaaatttg gtagagcaca tgctatattc
      121 catccatact taatttctga ccacagccct gcagtcttgg tgattcctga tggtattgtt
      181 tgtaaaccta aatcctttag gtttatgaac tacattgcag ataagcctga attcattcct
      241 ttggttgaaa atgtatggaa gaaagtagtc aatggagttc ctatgttcaa agtggttcaa
      301 aaacttaaag ctttgaaaaa ggatttgaac tttcttaact ggcagaatgg taatattttc
      361 tctaaagtta aagatcttaa gcaaaaactg aaagttgctc aggctgaagt agatgataat
      421 ccttttgata aaactgttaa agctgaagct gttaagctat tgaatgaata tagagatgct
      481 tgtaaagatg aaatgaagat attaaaacaa aaagttcgtg taaaatggct ggaggatgga
      541 gataaaaatt caaaatattt tcatagcatc cttaagtcta ggaagagtaa aagcagagtt
      601 gagagtattt gtaatgatca tggccagagg ttttttgggg gtgaagttgc agatcaaatt
      661 gtagaacatt tcaaaaaaaa tttgggaagc tcaagcaata cacaacctgt ggaggatttg
      721 ggagatatat tcactaaagt tttaagtgca gaagaagcta actccatggt ggttgaggtg
      781 accaatgctg aaattaaaga agctcttttt gatattgaca gtaataaagc ttcaggccca
      841 gatggctata ctgctagatt ctttaaaaaa gcttggccag ttgtggagat gatatatgtt
      901 tag
//
LOCUS       XM_071831105             753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840862), mRNA.
ACCESSION   XM_071831105
VERSION     XM_071831105.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..753
                     /gene="LOC139840862"
                     /note="uncharacterized LOC139840862; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840862"
     CDS             1..753
                     /gene="LOC139840862"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687206.1"
                     /db_xref="GeneID:139840862"
                     /translation="MQTHVHKDNEGTYWWITSENKIKPYLTGQVWEDLRSNAANVGWC
                     DVIWFPQYTPKHAFICWLAVQQRLTTQDRLKVSYPNEVFICSLCGKHEDSHPHLFFKC
                     EFSSQVWENTKKMLVYKGLHNDLGLIVNDFARYPARKDIRNILNKIAVAATVYYVWME
                     RNKIQFLKLKKSVDAVSQEVKDFIRVKLTSLKVKSSKNIGMIAGMCNLKVVGCSLQLD
                     FSMCIGDVFLWVCCSGFVFPSLWVRIFPAYVL"
     misc_feature    73..324
                     /gene="LOC139840862"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcaaacac atgtgcataa agataatgag ggtacatact ggtggattac tagtgaaaat
       61 aaaataaaac cctacttaac tggtcaagtt tgggaagatt taaggagtaa tgctgcaaat
      121 gttgggtggt gtgatgtcat ttggtttcca caatatacac caaagcatgc atttatatgc
      181 tggcttgctg tgcagcagag attgacaact caagataggt taaaagtgtc gtaccctaat
      241 gaagtgttta tttgcagcct atgtggaaag catgaggatt cccatccaca tttgtttttt
      301 aaatgtgagt tctcatctca agtgtgggaa aacacaaaga aaatgcttgt ttataagggt
      361 ctgcataatg atttgggttt aattgtgaat gattttgcaa gatatcctgc tagaaaggat
      421 attaggaata tactgaataa aattgcagtt gctgccactg tatactatgt atggatggaa
      481 aggaataaga tacagttttt gaagttgaag aaatctgtgg atgcagtaag tcaggaggtg
      541 aaggatttta ttcgggttaa gttgacttcc ctgaaggtca agagtagtaa gaatattggt
      601 atgatagctg gtatgtgtaa tttgaaggtg gttggttgta gtttgcagtt ggattttagt
      661 atgtgtattg gagatgtatt tctttgggtg tgttgtagtg ggtttgtatt tccaagttta
      721 tgggttagga tattccctgc ctatgttctg taa
//
LOCUS       XM_071831106            1032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840864), mRNA.
ACCESSION   XM_071831106
VERSION     XM_071831106.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1032
                     /gene="LOC139840864"
                     /note="uncharacterized LOC139840864; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840864"
     CDS             1..1032
                     /gene="LOC139840864"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687207.1"
                     /db_xref="GeneID:139840864"
                     /translation="MWDSLNSILNISGVSWVICGDFNEVRNSSERLNCQFIENRAKMF
                     NEFINQNMLVDIPMGGRKFTRVSDDGVKMRKLDRFLVLGDFLNLWSGLKVIALDRLKS
                     DHCPIMLSDGEVNFGPKPFKVFDDWFHVEDVDQVIAESWSAPLEGNRKDCVFRNKLKR
                     LKEALKIWSQTHFGNLDVEIENAKREATNLELKAESGSLDSVEYENWMKSRKLWLDKE
                     KIKCRMLKQKARVRWMIEGDENSKYFHNSLRRNYNKTNIRGVSVNGAWCVDPVTIKEA
                     AASHFQTLFSEVGNERPSLDGLSYMSISEQEATDLELPFSEAEVRESVNCCGSSKAPG
                     PDGFNLGFF"
     misc_feature    <49..330
                     /gene="LOC139840864"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgtgggact cgcttaacag catcctaaat attagcgggg tttcgtgggt gatttgtggt
       61 gatttcaacg aggttaggaa tagttccgaa agattaaatt gtcaattcat tgagaatcga
      121 gctaagatgt ttaatgagtt tattaatcaa aacatgctag tggatattcc gatgggtggg
      181 agaaaattta ctagggttag tgacgacggg gtcaagatga ggaaattgga cagatttctt
      241 gttttggggg attttcttaa cttgtggtcg ggcttgaaag tgattgcttt agatagattg
      301 aagtcggatc attgtcctat tatgctttca gatggggaag ttaattttgg tcctaaacct
      361 tttaaagtct tcgacgattg gtttcatgtg gaagatgttg atcaagtcat cgccgaatct
      421 tggtcagccc cgttagaagg aaaccggaaa gattgtgttt ttcgtaataa attgaaaaga
      481 ttgaaagagg ccctcaaaat ttggagccaa actcacttcg gtaacttgga tgtcgaaatt
      541 gaaaatgcaa aacgtgaggc tacgaacctc gaacttaagg cagaatcggg gagtcttgat
      601 tcagttgaat atgagaattg gatgaagtcg aggaagcttt ggttagacaa ggaaaaaata
      661 aaatgtagga tgttgaaaca aaaggcacgg gtgcggtgga tgatagaagg tgatgaaaac
      721 tccaagtatt ttcataactc gttacgtaga aactacaaca aaaccaacat tcgaggtgtt
      781 tcggtaaatg gtgcatggtg tgtagatccg gtcacgatca aagaggcagc agcctctcat
      841 tttcaaacat tatttagtga ggtaggtaat gagcgaccaa gcttggatgg tttgtcgtac
      901 atgtcgattt ctgaacagga agcaactgac cttgagttgc cattttctga ggccgaagtt
      961 agagagtcgg ttaattgttg tggcagctcg aaagcccccg ggccggatgg ttttaacttg
     1021 ggattttttt aa
//
LOCUS       XM_071831107             459 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kirola-like (LOC139840865),
            mRNA.
ACCESSION   XM_071831107
VERSION     XM_071831107.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..459
                     /gene="LOC139840865"
                     /note="kirola-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139840865"
     CDS             1..459
                     /gene="LOC139840865"
                     /codon_start=1
                     /product="kirola-like"
                     /protein_id="XP_071687208.1"
                     /db_xref="GeneID:139840865"
                     /translation="MALSGIQTKQIMVKSDGDVMYEIFRYRPHHIADMSPKYIKGVDL
                     HDGHEWGTVGSIITWTFLHEGKPKVAKEKFEAVDDEKKSLCYKVIGGDILEAYKTFLI
                     TVHVDTNGEENVVTWTFNYEKLNESVPNPDSLMDFLVSMTKDIETHLLKD"
     misc_feature    4..456
                     /gene="LOC139840865"
                     /note="Pathogenesis-related protein Bet v I family;
                     Region: Bet_v_1; smart01037"
                     /db_xref="CDD:198105"
     misc_feature    order(31..33,70..75,82..84,94..96,115..117,175..177,
                     181..186,199..201,208..210,214..216,250..252,256..258,
                     262..264,274..279,298..300,304..306,310..312,343..345,
                     349..351,355..357,361..363,397..402,406..411,418..423,
                     427..435)
                     /gene="LOC139840865"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     misc_feature    order(139..141,148..171)
                     /gene="LOC139840865"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
ORIGIN      
        1 atggctctaa gtggaattca aactaagcaa ataatggtca agtctgatgg agatgtgatg
       61 tatgaaatat tccgatatcg gccacatcac atagccgata tgagccccaa gtacataaaa
      121 ggtgttgatc ttcacgatgg tcatgaatgg ggtactgttg gatcaatcat cacctggacc
      181 tttcttcatg aagggaagcc aaaagtggcc aaagaaaaat ttgaagcagt tgacgacgag
      241 aaaaagtcat tgtgctacaa ggtaatcggg ggcgatatat tggaagctta caagacgttt
      301 ttgatcacgg ttcatgttga cacgaatgga gaagagaacg ttgttacgtg gacttttaac
      361 tacgagaagc tcaatgagag tgtcccaaat ccagatagtt taatggattt ccttgtcagc
      421 atgactaaag atatcgagac ccacctcctc aaagactga
//
LOCUS       XM_071831108             876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840866), mRNA.
ACCESSION   XM_071831108
VERSION     XM_071831108.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..876
                     /gene="LOC139840866"
                     /note="uncharacterized LOC139840866; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840866"
     CDS             1..876
                     /gene="LOC139840866"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687209.1"
                     /db_xref="GeneID:139840866"
                     /translation="MDAYLKIFDDDSSDDELLLGVMGSCAEELDQEAGEGSSQALPQP
                     PRARIYIPRDREGAAERLHRDYFAESPTYPDSKFKRRYRMQPQLFERIISGRVMTVTD
                     LYEQEYLRKPTACDIQRIYERHETRHVLGGCLEASIACIGNGRIVPLHGKNWTTLIKA
                     YQSPTDEPCAKVTRFQESARKDVERTFGVLQGRFNILRVPGRAWRAKKMHRILCCCVL
                     LHNIIQEDNGFAITSLDEEYLKEPENRTVFVRNRNTSRDSREKEIRDKDVHNALRANL
                     TEHIWNLPPNYRRTI"
     misc_feature    <460..684
                     /gene="LOC139840866"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggatgcct atttaaaaat cttcgacgat gattcttcag acgatgaatt gttattaggt
       61 gttatgggtt cgtgcgccga agagctagac caagaagctg gtgagggctc aagtcaggca
      121 cttccacaac ctccacgagc ccgaatctat attcctaggg atcgcgaagg tgcagctgaa
      181 cgtctacaca gagactattt tgctgaatct cctacttatc ccgatagcaa atttaaaaga
      241 cgttatcgaa tgcaaccaca attattcgag cgtatcatat caggacgggt tatgacagtt
      301 actgatttgt acgaacaaga atatctacgt aaaccaactg catgtgatat tcaacgaata
      361 tatgaaaggc acgaaacaag gcatgtttta gggggatgct tggaagcatc aattgcatgc
      421 attgggaatg gaagaattgt tccgttgcat ggcaagaatt ggactacact tatcaaagca
      481 tatcaatccc caaccgacga gccatgtgca aaggttacac gttttcaaga aagtgcacga
      541 aaagatgttg agcgaacatt tggtgtcctt caaggtagat tcaatatatt acgtgtgcct
      601 ggacgagctt ggagagctaa aaaaatgcac cgcatattat gttgttgtgt tctattgcac
      661 aatataatcc aagaggataa tggttttgct ataacgtcac ttgacgaaga gtatctaaaa
      721 gagccagaaa accgaaccgt ttttgttagg aatcgaaata cttctcgaga ttcacgcgaa
      781 aaggaaattc gcgacaaaga tgtgcataat gcacttcgtg cgaacttaac cgagcatatt
      841 tggaatcttc caccaaacta ccgtcgtact atttaa
//
LOCUS       XM_071831109             453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 18.2 kDa class I heat shock
            protein-like (LOC139840867), mRNA.
ACCESSION   XM_071831109
VERSION     XM_071831109.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..453
                     /gene="LOC139840867"
                     /note="18.2 kDa class I heat shock protein-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 74 Proteins"
                     /db_xref="GeneID:139840867"
     CDS             1..453
                     /gene="LOC139840867"
                     /codon_start=1
                     /product="18.2 kDa class I heat shock protein-like"
                     /protein_id="XP_071687210.1"
                     /db_xref="GeneID:139840867"
                     /translation="MSIVPSLFGGRRNSIFDPFSLDVWDPFTDFQNLPSETSALVNAR
                     VDWKETPEAHVFKADLPGIKKEEVKVEVEDGKVLNISGERNIEKEDKNDKWHRVERSS
                     GKFTRRFVLPENAKMDQVKAAMENGVLTITVPKDEVKKPEVKCIDISG"
     misc_feature    130..405
                     /gene="LOC139840867"
                     /note="Alpha crystallin domain (ACD) found in
                     Saccharomyces cerevisiae (Sc) small heat shock protein
                     (Hsp)26 and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally active as...;
                     Region: ACD_ScHsp26_like; cd06472"
                     /db_xref="CDD:107229"
     misc_feature    order(130..150,169..171,175..177,181..186,250..252,
                     265..267,274..300,304..306,319..321,376..384)
                     /gene="LOC139840867"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:107229"
ORIGIN      
        1 atgtcgattg ttccaagctt atttgggggc cgaagaaaca gcattttcga cccgttttca
       61 cttgacgttt gggatccatt cacagacttt cagaatcttc catctgaaac atctgcatta
      121 gtaaatgcac gtgttgattg gaaagaaaca ccagaagctc acgtgttcaa ggccgatctt
      181 cccgggatta aaaaagaaga ggttaaagtt gaagttgaag atggaaaggt gttaaacata
      241 agcggtgaga gaaacatcga gaaagaagac aagaatgata aatggcatcg tgttgaacga
      301 agcagcggaa agttcacaag gaggtttgtg ttgccagaaa atgcgaaaat ggatcaggtc
      361 aaagcggcta tggaaaacgg agtgctaacc attactgtgc cgaaagacga agttaagaaa
      421 cctgaagtga agtgtattga tatatctggt tga
//
LOCUS       XM_071831110            1656 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840868), mRNA.
ACCESSION   XM_071831110
VERSION     XM_071831110.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1656
                     /gene="LOC139840868"
                     /note="uncharacterized LOC139840868; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840868"
     CDS             1..1356
                     /gene="LOC139840868"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687211.1"
                     /db_xref="GeneID:139840868"
                     /translation="MAAHSPWRLQLQWEKSALPKNKSLNIRVHSIIYTHRKRCSFTSY
                     TTSCCTSRPNNNAVSKSDKQLTIVKVSVNDEVSVTETKQLPNNKLINLNYKPLFGWPK
                     SFIVSKKVRGIILMNLITLLYASNIPVLKKVEAIADPAAFTVVRFAIAAIPFLPSVLR
                     SRGDVRTFNSGIELGLWASLGYLMQALALLTSDAGRASFIAMFTVIVVPLIDGMLGAV
                     IPARTWFGALMSIIGVGMLESSGSPPCVGDFLNFLSALFFGIHMLRTEHISRKTNKED
                     FLAVLGYEVCVVAFSSIIWYLIGGTIDGSLEYHPSSWKWASFLKWIVNFPWIPALYTG
                     VFTTGLCLWIEMAAMRDVSATETAIIYGLEPVWGAGFAWFLLGERWGVFGWFGAALVL
                     GGSLMVQIVGASSPSSYVESDDSRNEEDSTTLVSNTENEIFASPVLVGSKKDVSDLLN
                     K"
     misc_feature    325..1197
                     /gene="LOC139840868"
                     /note="Permease of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism, Amino
                     acid transport and metabolism, General function prediction
                     only]; Region: RhaT; COG0697"
                     /db_xref="CDD:440461"
ORIGIN      
        1 atggctgccc actcaccatg gagattgcaa ttgcaatggg agaaatcagc attaccaaaa
       61 aacaaatcat taaacatacg cgttcattct atcatctaca ctcacagaaa acgttgttct
      121 ttcacctcct acacgacgtc gtgttgtact tccagaccta ataataatgc tgtaagtaaa
      181 tccgataaac aacttacgat tgtaaaagtt tcagtaaacg acgaagtttc ggtaactgaa
      241 acaaagcaat taccgaacaa caagttgatt aatctcaact acaagccgtt atttggatgg
      301 ccgaagagtt ttattgtatc gaagaaagtt cggggcatca ttttgatgaa ccttatcact
      361 ttactttacg ctagtaacat accagtgctg aaaaaggtgg aggccattgc ggaccccgcg
      421 gctttcactg tcgttagatt tgctattgcc gccataccat ttctcccgtc tgttttgaga
      481 tctcggggtg acgttcgaac gttcaattca ggaattgagt tagggttatg ggctagttta
      541 ggctatctaa tgcaagctct cgcactgctg acttctgatg ctgggcgcgc gtcctttatt
      601 gccatgttta ctgtaattgt ggttccgttg attgatggta tgctaggagc cgtgattcca
      661 gcccgtactt ggtttggagc tcttatgtcc attattgggg ttggcatgct tgaatctagt
      721 ggctcacctc catgtgttgg agattttttg aactttttaa gcgcgttatt ctttggtata
      781 cacatgctta gaactgaaca tatatctagg aaaacaaaca aagaggactt cttagcagtc
      841 cttggatacg aggtgtgtgt tgttgctttc tcatctatta tatggtattt gattggaggc
      901 acgattgatg gtagccttga atatcatcca tcgtcttgga aatgggcaag tttcttgaag
      961 tggattgtga atttcccttg gataccggct ttatataccg gtgtgtttac gactggacta
     1021 tgcttgtgga tagagatggc agcaatgcgt gatgtatcag caacagaaac tgcaattatt
     1081 tatggactgg agccagtttg gggtgctggt tttgcatggt ttctgttagg tgaaaggtgg
     1141 ggtgtttttg gatggtttgg ggctgctctt gttctaggtg gaagtttgat ggtgcagata
     1201 gttggggctt catccccgag ttcatatgta gaaagtgatg attctcgtaa tgaagaagat
     1261 tctactacac tcgtttcaaa tacggaaaac gaaatttttg cttctccagt tcttgtcggt
     1321 tccaaaaaag acgtatccga tcttttaaac aagtaattct aaaccaagtg tcattacata
     1381 catgtgatca aggttgtcaa gatcgaggtc gtaatcagga tcattttcat cttcatatga
     1441 ttggatcaca agatcctact agtgtaccat caacggtcaa gattcaaggt tttaacttga
     1501 tagtgaaata cagttcagag agaataagat cactaaattt agttgtaaaa gttgcagact
     1561 tgatgaacat tacctagcta ctcatccatt tgttctcatt tcttgataaa cgatattagt
     1621 acattcacgg cttataaatt aattcaagtg agaaaa
//
LOCUS       XM_071831111             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840869), mRNA.
ACCESSION   XM_071831111
VERSION     XM_071831111.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139840869"
                     /note="uncharacterized LOC139840869; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840869"
     CDS             1..606
                     /gene="LOC139840869"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687212.1"
                     /db_xref="GeneID:139840869"
                     /translation="MIQGFELGFGNRDRWRWSAASDDTYTVKKMCSIMEQQVFAHITD
                     SDGILRNHFLPKKIEIFAWRVIKRKMPVRSELDKRGIDLHSVRCPLCDDDVESIEHCF
                     IFCKSSMEIWERVHNWWGLGAFTNLSLNEILRGNTAAYTTCEGKLIWQAIEWVCAYFI
                     WKNRNNKVFHGKSWCSPVALNEIQIKSFEWISVRAKKKKLD"
     misc_feature    73..315
                     /gene="LOC139840869"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgatacagg gattcgagtt agggtttgga aatcgtgaca ggtggagatg gtctgcagca
       61 agcgacgaca cttatacagt gaaaaaaatg tgctccatca tggagcagca ggttttcgca
      121 cacatcactg attcggatgg cattcttcgc aatcattttc tacctaaaaa aattgaaatc
      181 ttcgcgtggc gtgtaattaa aagaaagatg ccggttagat cagaactaga caaaaggggg
      241 atagatttgc attcggtaag atgtcctctt tgcgacgatg acgtggaatc tattgagcat
      301 tgctttattt tctgtaaatc ctcgatggaa atttgggaac gggtacataa ctggtggggt
      361 cttggcgcgt tcacaaacct aagtctgaac gaaatcctga ggggtaatac tgctgcttat
      421 actacttgtg aagggaagct tatctggcaa gcgatcgagt gggtttgtgc gtatttcatt
      481 tggaaaaacc ggaataataa ggtgttccat ggaaaatcat ggtgctcccc ggtggctcta
      541 aatgaaatac aaatcaaatc ctttgaatgg atctctgttc gtgcaaagaa aaagaagctc
      601 gattga
//
LOCUS       XM_071831112             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840871), mRNA.
ACCESSION   XM_071831112
VERSION     XM_071831112.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139840871"
                     /note="uncharacterized LOC139840871; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840871"
     CDS             1..783
                     /gene="LOC139840871"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687213.1"
                     /db_xref="GeneID:139840871"
                     /translation="MDGDQVPSTPKERDPGKRQPIWKYPPNQKEQVRRDYLSVGPFQV
                     RLNVYPGKGIEKHTRGFQYSWFGIFQNWLENSPTTDSAYCFICYLFSDKPNVRNGSNA
                     FTVKGFNKCKKVNNGNNCPFLKHIGSSQHKDALISCENLLNQKAHIQNVIEKRSAEGV
                     LKNRIRLKASVNVTRWLTFQAYAFRGNDETAESNNRGNFIELLKLLASYNDDVAKVVL
                     ENAPYNSKFTSGDIQKEILSIITSKVRKHIQNEVGDSYFCVM"
     misc_feature    304..>780
                     /gene="LOC139840871"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atggatggag atcaagttcc atccactcca aaagaaagag atcccggaaa aagacaacca
       61 atttggaagt acccaccgaa tcagaaagaa caagtaagac gggattattt aagcgtcgga
      121 ccttttcaag ttcgtttgaa tgtgtatcct ggcaaaggta tagagaaaca cactcgtgga
      181 ttccaatact catggttcgg tatttttcag aattggttag agaattctcc gacaacagat
      241 tctgcatatt gtttcatttg ttacttattc agtgacaaac caaatgttcg aaatggttca
      301 aatgctttta ccgttaaagg attcaacaag tgtaaaaaag ttaataatgg gaataattgt
      361 ccttttttaa agcatattgg tagttcccaa cataaagatg cccttatatc ttgtgagaat
      421 ctgttgaacc agaaagcgca cattcaaaat gtcattgaaa agagaagtgc cgagggtgtt
      481 ttgaagaacc gtatacgatt gaaagcttcg gtgaatgtaa ctcgttggtt gacattccaa
      541 gcttatgctt ttcgagggaa tgatgaaaca gctgaatcaa ataatcgtgg taattttatc
      601 gagttgttaa aacttctagc ttcatataat gatgatgttg cgaaagtcgt gctagagaat
      661 gctccttata actcaaagtt tacttcaggt gatattcaaa aagaaatatt gagtattatt
      721 acaagtaagg ttcgaaaaca cattcagaat gaagttggtg attcttactt ttgtgttatg
      781 tga
//
LOCUS       XM_071831113             807 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840872), mRNA.
ACCESSION   XM_071831113
VERSION     XM_071831113.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..807
                     /gene="LOC139840872"
                     /note="uncharacterized LOC139840872; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840872"
     CDS             1..807
                     /gene="LOC139840872"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687214.1"
                     /db_xref="GeneID:139840872"
                     /translation="MVDEARDEAKREQMAIVIRFIDKDGIIRERFLDLVHVTDTSAIT
                     LKANLWNRLLQYEFDTSKIRGQGYDGASNMRGEWNGLQALVIKECPYAYYVHCFAHRL
                     QLALVATSREVIPVHQFFNRLSCIINVICASSKRHDELQKSKALEIKHLLELGEIKSG
                     KGANQVGTLNRADDTRWGSHFRSVCSLLKMFDATRVVLEGIIDDSSSYSQRADAAEAY
                     NYLVGKRHHFTGEANAFGVRSPGTATINLHISSTKKTTTATLCRLVFSLV"
     misc_feature    <1..240
                     /gene="LOC139840872"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atggtagatg aggcacgaga tgaggctaag cgggaacaaa tggccatagt cataagattt
       61 attgataaag atggaataat aagggaaaga tttttagatt tggttcatgt tacggacaca
      121 tcggcaatta ctcttaaagc aaatttgtgg aatagactat tgcaatatga gtttgatact
      181 agtaaaattc gtggtcaagg ttatgatggt gctagtaaca tgagagggga atggaacggg
      241 ttacaagcac ttgttattaa agaatgtccg tatgcatact atgttcattg tttcgctcat
      301 agattacaac ttgccctggt tgctacttca agagaagtta ttccagtgca tcaatttttc
      361 aatagattga gttgtattat taatgtgata tgtgcttcta gtaagcgtca tgatgagctg
      421 caaaagtcta aggcattaga gattaagcat ttgttggaac ttggtgaaat taaatccggt
      481 aagggggcaa atcaagttgg gaccttaaat cgagcagatg atacgcgttg gggttctcac
      541 tttcgttccg tttgtagctt acttaagatg tttgatgcta ctcgtgtagt tttggagggt
      601 ataattgatg acagttctag ttactctcaa cgtgctgatg cagctgaggc ttataattat
      661 ttggtcggga aacgccatca ctttaccgga gaagcgaacg cctttggagt tcgatcgccg
      721 gggaccgcca ctatcaactt acacattagc tcaacgaaga agaccacaac cgctactctc
      781 tgccgactcg tgtttagctt agtttag
//
LOCUS       XM_071831116             309 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840873), mRNA.
ACCESSION   XM_071831116
VERSION     XM_071831116.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..309
                     /gene="LOC139840873"
                     /note="uncharacterized LOC139840873; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840873"
     CDS             1..309
                     /gene="LOC139840873"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687217.1"
                     /db_xref="GeneID:139840873"
                     /translation="MPPKLGDPGHFVIPCNMGGSEVYDALVDLGASVNLMPYSIYKKL
                     NLGELKPTWMVLKMGNQTFDTPIGIAEYLMVKVDKLTFPADFVILEMLKDEHVPIILG
                     "
     misc_feature    37..306
                     /gene="LOC139840873"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(82..84,88..90,94..96,166..174,298..300)
                     /gene="LOC139840873"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    82..90
                     /gene="LOC139840873"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    82..84
                     /gene="LOC139840873"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(166..177,187..198)
                     /gene="LOC139840873"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcctccca aattgggtga tccgggtcat tttgtaatcc catgcaatat gggagggtcg
       61 gaagtatatg atgcacttgt cgacttgggg gctagtgtaa atcttatgcc ctattcaatt
      121 tataaaaagt taaatcttgg ggaactaaag ccgacctgga tggttttaaa aatgggaaac
      181 caaacgtttg atacaccaat cggcatagcc gaatacctta tggtaaaagt tgataaattg
      241 acctttccgg ccgatttcgt gatcctcgaa atgctcaagg atgaacatgt cccaataatt
      301 ttgggatga
//
LOCUS       XM_071831117            1800 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840874), mRNA.
ACCESSION   XM_071831117
VERSION     XM_071831117.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1800
                     /gene="LOC139840874"
                     /note="uncharacterized LOC139840874; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840874"
     CDS             1..1800
                     /gene="LOC139840874"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687218.1"
                     /db_xref="GeneID:139840874"
                     /translation="MDRSSSSSSSLSISCESSYTSSPVECDDVSTGTQESQNEEISCE
                     KNINEDTCELDVHTPENHRDSDYCDQNIETVSHDNVHVQDNCSKSMHCDDNIEEPTIG
                     MSLMDEETRYAIVSCHRAGKSQSKTQNTLNPRPVTKTNCGARVNAKRGAENKWYVSKV
                     QLKHNHSFSPSKGRFYRCNRVVNSRVRRQLEIFQRAGVRMNKGFNSLVVENGGYENIP
                     FTEKDCRNYIDKVKRLKFGEGDAEAIQSYFMKVQSTYHNFFYAWELDDENRLKSLFWA
                     DGRSRTAYEEFGDVVDGFQWDRAEKENIEDFNSYNSWYPPVTRYAMEEQTKRFFTNAK
                     FKEFRSELTGKMYCKISSSEVKEDYLEYEVIEDINVEGTIIKKPFIVWLNKKDSDEKC
                     EVKCVCRLFESRGMLCRHAITVLIDNNVYSLPNRYILNRWRKDVKRRHTKVKVSYSDW
                     DGSEVGTRYNKMCTAFSEVADLASEFEEKCSLVLNKVNELKREVIDGKSSCSTFVCTQ
                     ESSPSNKDNVKIRDPLPVRGKGRPPNNRLKFTSEKIITKMQKKNKNMQDSDHREGVCG
                     ANDKVRKRSKNDKEKVFVELILEYPNISQFFSP"
     misc_feature    355..1638
                     /gene="LOC139840874"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggatcgat cttcatcatc gtcttcttca ttaagcatat cgtgtgaatc atcgtatacc
       61 tcttctcctg tagaatgtga cgacgtatca acaggtactc aagaatctca gaatgaagaa
      121 attagttgtg agaaaaacat aaatgaagat acatgtgaat tagatgtcca tactccagaa
      181 aaccaccggg atagtgatta ttgtgatcaa aatattgaaa ctgtaagtca tgataatgta
      241 catgttcaag ataattgttc taaaagtatg cattgtgatg ataatattga agaaccaact
      301 attggcatgt ctcttatgga tgaagagaca agatatgcta tcgtttcttg tcatcgggct
      361 ggaaagtcac aatcgaaaac acaaaatact ttgaatcccc gccctgttac aaaaacaaat
      421 tgtggtgcta gagttaatgc aaaacgcggt gctgaaaata agtggtatgt ttcaaaagtt
      481 caactcaaac ataatcactc atttagtccg agcaaaggac gattttatcg atgtaataga
      541 gtcgtaaatt cccgtgtacg aagacaactt gaaatatttc aaagagcagg tgtacgaatg
      601 aataaaggtt ttaattcgtt ggtcgtggag aatggaggtt atgaaaatat tccatttaca
      661 gaaaaagatt gtcgcaatta tattgataaa gttaaacggt taaagtttgg ggaaggggat
      721 gccgaagcaa ttcaaagtta tttcatgaaa gttcaatcta catatcataa ttttttttac
      781 gcatgggaat tggatgatga aaatcgatta aagagtttgt tttgggcaga tggaaggagt
      841 aggacagctt atgaagaatt tggggacgtt gttgatggtt tccagtggga cagggctgaa
      901 aaagaaaaca tagaagattt caattcttac aattcgtggt atccaccagt cacccgttat
      961 gccatggaag aacaaacgaa acgctttttt acaaatgcta agtttaaaga gtttcggagt
     1021 gagctaacgg gaaaaatgta ttgcaagatt agttcatcag aagtcaaaga agattattta
     1081 gagtatgaag tcatcgagga tattaatgtt gaaggaacta taataaagaa gccatttatc
     1141 gtgtggctca ataagaaaga ttctgatgaa aaatgtgaag ttaaatgtgt ttgtcgtttg
     1201 tttgagtctc ggggaatgtt gtgtaggcat gcaattacgg tactcatcga taataacgta
     1261 tattccttgc ctaatcggta catcctaaat agatggagga aagatgttaa acgaaggcat
     1321 actaaagtta aagtaagtta tagtgattgg gatggttcgg aagttgggac tcgatataat
     1381 aaaatgtgta ctgctttctc tgaagtggcg gatttagcat ccgagtttga agaaaagtgt
     1441 agtcttgtac ttaacaaagt aaacgaatta aagagagaag ttatagatgg aaaaagtagt
     1501 tgtagtacct tcgtgtgtac acaagaatct agtccttcta acaaggataa cgttaagatt
     1561 cgtgatcctt tgccggtacg gggaaaaggt cgtcctccaa ataataggct caagttcacg
     1621 tctgagaaaa tcattaccaa aatgcagaaa aagaataaga atatgcaaga ttctgatcat
     1681 agagaaggtg tttgtggcgc taatgataaa gtgaggaaac gttcaaagaa tgataaagag
     1741 aaggtgtttg tggagctaat cttagaatat ccaaacatat ctcaattttt ctctccataa
//
LOCUS       XM_071831118             510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840875), mRNA.
ACCESSION   XM_071831118
VERSION     XM_071831118.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..510
                     /gene="LOC139840875"
                     /note="uncharacterized LOC139840875; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840875"
     CDS             1..510
                     /gene="LOC139840875"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687219.1"
                     /db_xref="GeneID:139840875"
                     /translation="MAESVGQVAKFKRLYGQVEEEKEDDVGKKGKGYGYDKHNLINEI
                     NLHKSLIFGVDVDSTKVSRLASVLGCSSANFPFTFIGILVGQNMHRKEDWKGVIYKVT
                     IPLASWKANLLFSGGRLTLGKSVLGAIGTHTMSLFQAPKKVIQIIESLHSKFFWGAKD
                     NERKIHWVN"
ORIGIN      
        1 atggccgaaa gtgttggtca ggttgctaag ttcaagcgtc tatatggaca agtggaagag
       61 gagaaagaag atgatgtagg taaaaaggga aagggatatg gatatgacaa gcacaaccta
      121 atcaatgaaa ttaacttaca caagtctttg atttttggag tggatgttga ctcaactaag
      181 gttagtcgtt tagcaagtgt tcttggttgc tcttccgcta actttccttt cacattcata
      241 ggcattctgg ttggccaaaa tatgcataga aaagaggatt ggaaaggtgt catctacaaa
      301 gtaacgatcc cccttgcatc ttggaaagca aacctcctct tctccggcgg tagactaact
      361 ttaggtaaat ccgtgttggg tgctattggt acccatacta tgtcgctttt tcaagctccc
      421 aagaaagtca ttcaaattat cgaatcgctt cattccaaat ttttttgggg agctaaagat
      481 aatgaaagga aaatccattg ggtgaactga
//
LOCUS       XM_071831120             444 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840877), mRNA.
ACCESSION   XM_071831120
VERSION     XM_071831120.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..444
                     /gene="LOC139840877"
                     /note="uncharacterized LOC139840877; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840877"
     CDS             1..444
                     /gene="LOC139840877"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687221.1"
                     /db_xref="GeneID:139840877"
                     /translation="MRIPVRVELDKRGIDLHSVRCPVCDDDLESVDHSLINCKFARDV
                     WSRVHKWWNFSSSSVLNVEVIEGKCGHSSSAIGQKIWQAVVWVCAYYLWKNHNLKVFR
                     NESWSASVLVSEIQVKAFEWISSRIKGKSIDWSNWLVNPQVFLNL"
     misc_feature    <4..132
                     /gene="LOC139840877"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagaattc cggttcgggt tgagcttgat aaaaggggta tcgatttaca tagtgtccga
       61 tgccccgttt gtgatgacga tcttgaatcg gttgatcact cacttatcaa ttgcaagttt
      121 gctcgtgatg tttggtctcg tgttcataag tggtggaatt ttagttcatc ttccgtctta
      181 aatgtggagg ttatcgaagg aaagtgtggt cactcctcat ccgctattgg tcaaaaaata
      241 tggcaagccg tggtttgggt gtgcgcctac tatttgtgga aaaatcataa tttgaaggtc
      301 tttcgtaatg aatcttggag tgcttcggtt ctagtgagtg agatccaagt taaagcgttc
      361 gagtggatct cgagtcgaat taaaggaaaa tctatcgatt ggtcgaattg gcttgtaaat
      421 cctcaagttt ttttaaattt atag
//
LOCUS       XM_071831121            1302 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840878), mRNA.
ACCESSION   XM_071831121
VERSION     XM_071831121.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1302
                     /gene="LOC139840878"
                     /note="uncharacterized LOC139840878; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840878"
     CDS             1..1302
                     /gene="LOC139840878"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687222.1"
                     /db_xref="GeneID:139840878"
                     /translation="MELGPVANQYCNSLNTYTVPYLVDAIESVLDHNIPTTTDDSSST
                     TTPVTPTQPPALPANWDRLDSIVLQWIYGTISLDLLRTVYKEDSTAQQAWDCLKGIFH
                     DNRNSRAVHLQHQFTNTRIENFPDASAYCQELKLLADQLGNVGPAIEEDILVLQLITG
                     LNDSGRGSYRGGNNRGRNNRGRGRGNQSFHSGNTQFQNQGFNSGQNQLQKPPWTYGPW
                     AWTNAQWAPPCPFPATPWTCPTTNQPGLLGPRPTANYASSVSSQPTDLEAAMHTMTLN
                     PPDDNWYLDTGTMSYMTNNQGNLLFYYPSTMTKHIIVGNGHGLPIHGFGHTCLNLPPS
                     DNLHLKNVLHSPPLIKNLISGHRLAIDNDISIDFEPFGFTVKEFSKGTPIARYNSTDD
                     LYPFHPSLMRPIQNKTFAFSASSSDLWHHRLGHPGLHLQCY"
     misc_feature    208..>492
                     /gene="LOC139840878"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    1174..>1284
                     /gene="LOC139840878"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
ORIGIN      
        1 atggaactcg gtccagttgc aaaccaatat tgtaattccc ttaacacata cacagtccca
       61 tatctagttg atgcaataga gtcagttctc gaccacaaca ttcccaccac cactgatgat
      121 tcctcctcca ccacaactcc cgttacaccc actcaaccac ctgcactacc agcaaattgg
      181 gatcgattag attccatcgt tctccaatgg atttatggaa cgatctccct tgatctcctt
      241 cgtaccgtat acaaagaaga ttccacggct caacaagctt gggattgttt gaaaggaatt
      301 tttcatgaca accgaaactc tcgtgctgtt caccttcaac accaattcac aaacactcgt
      361 atcgaaaatt ttccagacgc atctgcctat tgtcaggaac tcaaattatt agccgatcaa
      421 ttgggtaatg tcggaccggc tatcgaagaa gacatattgg tattgcaatt gatcactggc
      481 ctcaatgact cgggtagggg gtcttatcgt ggtgggaaca atcggggcag aaataatcga
      541 gggcgtggaa gaggtaatca aagctttcat tcgggtaaca ctcaatttca gaatcagggt
      601 tttaattcag gtcaaaatca acttcagaag ccaccatgga cttacggacc ttgggcctgg
      661 actaatgcac aatgggctcc tccttgcccc tttccagcca caccatggac ttgcccaaca
      721 actaatcagc ctggattatt gggccctcgg cccactgcta actacgcaag ttcagtttca
      781 tctcagccca ctgatttgga agctgctatg cacactatga ccttaaaccc gcccgatgat
      841 aattggtatt tggacacggg taccatgtct tacatgacca ataaccaagg taatctctta
      901 ttttattacc cttcaacaat gactaaacat attattgtag gaaatggtca cggtttgcca
      961 atacatgggt tcggtcacac ttgcttaaac cttccaccct cggacaactt acacttaaaa
     1021 aatgtcctac actcacctcc tttaattaaa aacttaattt ctggtcatcg ccttgctatt
     1081 gataatgata tatctattga ctttgaacct tttggtttca ctgtgaagga attttcgaag
     1141 gggaccccaa tagctcggta taatagcacc gacgatctct atccatttca tccatcattg
     1201 atgcgtccaa ttcaaaataa gacttttgct ttttcagctt catcatcaga tttgtggcat
     1261 caccggctag gtcatccggg tttacatctt caatgctatt ag
//
LOCUS       XM_071831122             932 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar-sorting protein
            BRO1-like (LOC139840879), mRNA.
ACCESSION   XM_071831122
VERSION     XM_071831122.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..932
                     /gene="LOC139840879"
                     /note="vacuolar-sorting protein BRO1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139840879"
     CDS             159..932
                     /gene="LOC139840879"
                     /codon_start=1
                     /product="vacuolar-sorting protein BRO1-like"
                     /protein_id="XP_071687223.1"
                     /db_xref="GeneID:139840879"
                     /translation="MASPSSATNIMLSINEKKTVTIDLYRPLRNYIVANYSERQAQTL
                     EDDLETLKQLRISIERSTTDSLTSRRDLYQSYFKALTAVESRFPISSDKDHVNSVTFT
                     WYDSFKTRNKASQQNIHLEKATVLFNLGAVYNQIGLGFDRSTVEGRRQAVQSFTAAAG
                     AFAYLRDNEAAKASVGNSVTVDVSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCA
                     KISRQAGLYYEEAVSALNVAPLSQHFDKTWTSHIWREAS"
     misc_feature    189..>914
                     /gene="LOC139840879"
                     /note="Protein-interacting Bro1-like domain of mammalian
                     Alix and related domains; Region: BRO1_Alix_like; cl14649"
                     /db_xref="CDD:472700"
ORIGIN      
        1 aaaatataaa aaaaaatctt taaagtgttc acaatatctc cttcattttg ccaggtaatc
       61 atcgtccact tccgatcgca caaatcataa tcaatcaatc gtattcataa actgccatta
      121 actacctgat aatcaccgtc aactaactca ccaaacagat ggcatctccg tcatcggcga
      181 cgaacatcat gctctcaatc aacgagaaaa aaaccgtcac aatcgatctc taccgtccgc
      241 ttcgtaacta catagtcgcc aattactccg aacgccaagc tcaaacccta gaagacgatc
      301 tcgaaaccct aaaacaactc cgaatcagca tcgaacgatc aacaaccgat tccctcactt
      361 cacggcgtga cctctatcaa tcttacttca aagccttaac agctgttgaa tctaggtttc
      421 cgatttcatc cgataaggat cacgtgaatt ctgttacgtt cacgtggtac gattcgttta
      481 aaaccagaaa caaagcgtct caacagaata tacatttaga gaaggctact gttttgttta
      541 atttaggtgc ggtgtataat cagatagggt taggttttga ccggtcaacg gtggaaggac
      601 gaaggcaggc ggtgcagtcg tttactgctg cagctggtgc ttttgcttat ttgagagata
      661 atgaggcggc gaaggcttcg gttgggaatt cggttacagt tgatgtttca gttgagtgtg
      721 cagggatgct ggagaggctg atgcttgctc aagcacagga gtgtgtgttt gagaacacaa
      781 ttgctaaagg aagcactcct ggcgtttgtg ctaagatttc tagacaggct ggactgtact
      841 atgaagaagc tgtatctgca ctaaatgtcg cacctctgag tcagcacttt gacaagacat
      901 ggacgtcaca tatttggcga gaggcttcgt aa
//
LOCUS       XM_071831123            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GDSL esterase/lipase 6
            (LOC139840880), mRNA.
ACCESSION   XM_071831123
VERSION     XM_071831123.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139840880"
                     /note="GDSL esterase/lipase 6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 47
                     Proteins"
                     /db_xref="GeneID:139840880"
     CDS             1..1116
                     /gene="LOC139840880"
                     /codon_start=1
                     /product="GDSL esterase/lipase 6"
                     /protein_id="XP_071687224.1"
                     /db_xref="GeneID:139840880"
                     /translation="MGKLPYLILFLSILFVDLASANQYLKSIFVFGDSQFDAGTNRLL
                     KHCKLQANFTPYGSTFFHHPTGRFTNGRTVADFISQYMGINFQKPYEEVHREIQHGKV
                     KSFPSNGLNFASAGSGLLPNTSQEAGVTSIQGQLQQFLSLIKRRIHLQKKKHVYLEKN
                     QIVNSIYLIAAGGNDIFTYFLLPNTPPITQEAFAHVLLKEVSIVIRKLYMVGARRFVI
                     FPVGPIGCIPGRVLIKSAPTHKCSGRMNRLAKYYNAGLARLVTVLPRIYPGAIVVYGA
                     TYSTTQKYRANPKQYGFANVTEACCGGGPLNGLLQCGLRGYKMCKKPNEYFFWDYFHP
                     TERTYGLLSKGLWAGGRRQIWPINIQTLATNKTLQPH"
     misc_feature    79..1047
                     /gene="LOC139840880"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; Region:
                     SGNH_plant_lipase_like; cd01837"
                     /db_xref="CDD:238875"
     misc_feature    order(100..102,346..348,520..522,988..990,997..999)
                     /gene="LOC139840880"
                     /note="active site"
                     /db_xref="CDD:238875"
     misc_feature    order(100..102,988..990,997..999)
                     /gene="LOC139840880"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     misc_feature    order(100..102,346..348,520..522)
                     /gene="LOC139840880"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
ORIGIN      
        1 atggggaaat tgccatatct catcctcttc ctcagtatac tctttgtaga tttagcatca
       61 gccaaccaat accttaagtc gattttcgtg tttggggact ctcagtttga tgcgggtacc
      121 aaccgtttac tcaagcattg taaactacaa gccaacttta caccttatgg ttcgaccttc
      181 tttcaccatc caaccggaag gttcaccaat ggtcgaaccg tcgcagattt catttcacaa
      241 tatatgggaa ttaatttcca aaaaccatac gaagaagttc atcgagagat tcaacatggc
      301 aaggtaaaaa gttttccgtc caacggactc aactttgcta gtgcaggaag tggacttttg
      361 ccgaatacaa gccaggaagc aggggtgaca tcaattcaag gccagttaca acaattccta
      421 agcctaataa agcgacggat ccatttacaa aagaagaagc acgtatattt ggaaaagaat
      481 caaattgtta actcgatata tcttatagct gcgggtggaa atgacatttt tacttatttc
      541 ttgttaccaa acacaccacc tattactcaa gaagcgtttg cacatgtttt gctgaaagaa
      601 gtatccatcg ttattagaaa actctacatg gttggggctc gtaggttcgt catattccct
      661 gtgggtccca ttgggtgcat tccggggcga gtcctcataa agagtgcacc aacgcataaa
      721 tgctcaggaa gaatgaaccg cttggctaaa tattacaatg ctggtttggc tcgtttagta
      781 accgttttac ctagaattta tcctggtgca atcgttgttt atggtgccac ttatagcact
      841 acacaaaagt atcgtgctaa cccaaaacag tatggttttg cgaatgtgac tgaagcatgt
      901 tgtggaggtg ggcccctaaa tggattgttg caatgtgggt tacgtggcta caagatgtgc
      961 aagaaaccaa atgaatactt cttttgggac tattttcatc caactgagcg tacttatggg
     1021 cttctctcga aaggattatg ggctggaggc agaagacaaa tatggcccat taatatccag
     1081 actttggcta ccaacaagac cttacagcca cattga
//
LOCUS       XM_071831124             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840881), mRNA.
ACCESSION   XM_071831124
VERSION     XM_071831124.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139840881"
                     /note="uncharacterized LOC139840881; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840881"
     CDS             1..501
                     /gene="LOC139840881"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687225.1"
                     /db_xref="GeneID:139840881"
                     /translation="MGNYISSCTTFTIISPKIKTNKAARVIFPTGEIRQFQDSIKAAE
                     IMLDCPNFFLVNSQSLNINKRFSPLSADQDLEPGNVYIMFPMRRVNSMITPADMAVFW
                     MSANNAPKRISGKISPELTTVATNEEEQPRLLVVDVCEFSHRLAVSRSKKPGLGTINE
                     EPIRSK"
     misc_feature    1..480
                     /gene="LOC139840881"
                     /note="PADRE domain; Region: PADRE; pfam14009"
                     /db_xref="CDD:464065"
ORIGIN      
        1 atgggaaact atatttcatc ttgtacaact tttacaataa tctcaccaaa aataaaaacc
       61 aacaaagcag ctagagttat tttcccaaca ggcgaaattc gacagtttca agattctatc
      121 aaagcggccg agatcatgct cgactgtcct aattttttcc tagtcaactc acaatcgttg
      181 aacatcaaca aacgtttttc gcctctttca gccgaccaag atttggaacc aggaaatgtt
      241 tatattatgt ttccgatgag acgagttaat tcaatgatca caccagctga tatggctgtt
      301 ttttggatgt ctgctaataa tgcgcctaaa cgaatttcag gaaaaatatc tcctgaatta
      361 acaacagttg caacgaatga agaggaacaa ccaaggttgt tggtggttga tgtttgcgag
      421 tttagtcata ggttagcggt ttctagatcg aagaagcctg gtttgggtac gattaatgag
      481 gagccgattc gaagcaaata g
//
LOCUS       XM_071831125            1695 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides berberine bridge enzyme-like
            21 (LOC139840883), mRNA.
ACCESSION   XM_071831125
VERSION     XM_071831125.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1695
                     /gene="LOC139840883"
                     /note="berberine bridge enzyme-like 21; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139840883"
     CDS             1..1695
                     /gene="LOC139840883"
                     /codon_start=1
                     /product="berberine bridge enzyme-like 21"
                     /protein_id="XP_071687226.1"
                     /db_xref="GeneID:139840883"
                     /translation="MSWIMLLSLIFFVCSFSISNGAGPSSAPKGPGPSAPKARPGSTP
                     SAPKGPGSSDPNSIYKSFLECLSTQSPQRDPTVSSIVYSPTVNSTAYTKTLEDHIKNR
                     RYNTTTTQKPVFIVAPTKEPHVQATVLCAKKLGVQIKIRSGGHDYDAVSYVSSEKTFI
                     ILDMFNLRAIDVNIATETAVAQAGALLGELYYRIWEKSKVHGFPAGACMTLGVGGHIS
                     GGGYGTMMRKYGLSVDHVINAKIVDVNGKIMDRKAMGDDLFWAIRGASGSSFGVILSF
                     TIKLVSVPKITTIFKVDKTLEQNATDIAVKWQSIMPTIDPDLFIRVMVQSITEKAKKS
                     VRVTFMALFLGDSNRLLGLMSKTLPELGLKKEECSEVSWLQATLFWANMDYNKTKPET
                     LLDRLPDRAKYIKRGSDYVQTPIPKQGWTAIFNKLMELDKVGLALNPYGGKMSEIPAN
                     ATPFPHRAGNLFKIQYSLNWEDPKSTEMYLNQAKGMYEFMATYVSKNPRGAFLNYRDF
                     DIGVNTGDGYNSGKVYGEKYFKGNFERLVKIKTTVVDPDNFFRNEQSIPTQRKPKP"
     misc_feature    304..>855
                     /gene="LOC139840883"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; Region: GlcD;
                     COG0277"
                     /db_xref="CDD:440046"
     misc_feature    1501..1671
                     /gene="LOC139840883"
                     /note="Berberine and berberine like; Region: BBE;
                     pfam08031"
                     /db_xref="CDD:369658"
ORIGIN      
        1 atgtcctgga ttatgctttt gtcactaata tttttcgttt gctcattttc tatctcaaat
       61 ggagccggac cttcgtctgc tcctaaggga cctggaccct cagctccaaa ggcgagaccg
      121 gggtccacac cctcagcccc aaagggtcca ggttcctctg atcctaattc aatttataag
      181 tcctttctcg aatgcctctc aacacaatca cctcaacgtg acccaacggt gtcctccata
      241 gtttatagcc ctaccgtcaa ctccacggcc tacacaaaaa ccttagaaga tcacatcaaa
      301 aatcgccgtt acaacaccac taccacacaa aaaccagtat tcattgtcgc tccaaccaaa
      361 gaaccgcatg ttcaagccac cgtgttgtgc gccaaaaaac ttggcgtcca gataaaaatt
      421 cgtagtggcg gtcacgatta tgatgcagtc tcgtacgtct catccgagaa aaccttcatc
      481 atactagaca tgtttaattt acgtgcgatc gatgttaata ttgccacaga aaccgcagtt
      541 gcccaagctg gagccttgtt aggcgaatta tattaccgaa tatgggaaaa aagtaaagta
      601 catggattcc cggccggagc atgcatgaca cttggcgttg ggggacatat aagcggcgga
      661 ggttatggca ccatgatgcg aaaatatggg ttatcagttg atcatgtgat caatgctaaa
      721 atagttgatg ttaatggtaa gattatggat cgaaaagcaa tgggtgatga tcttttttgg
      781 gccattcgtg gggcgagtgg tagtagtttc ggcgtcatat tatcattcac tataaaatta
      841 gtttcggtac caaaaattac cactattttt aaggtagata aaacgttaga acaaaacgcg
      901 acggacattg ctgttaaatg gcagtcgata atgcctacca tcgaccccga tttatttatt
      961 agagttatgg tgcaatcgat tacagaaaag gccaagaaat cggttcgagt aacatttatg
     1021 gccctttttc taggggattc aaacagatta ttaggtttga tgagcaaaac attaccagaa
     1081 ttaggtttaa aaaaagaaga gtgttcagaa gtaagttggc ttcaagccac tctgttttgg
     1141 gccaacatgg attacaataa aacgaagccg gaaacacttc tagaccgact cccggacaga
     1201 gcgaaataca taaaacgagg atcggactat gtacaaacac cgataccaaa acaaggttgg
     1261 actgctatat tcaataagtt gatggaacta gataaagttg gactagcttt gaacccgtac
     1321 ggtgggaaaa tgagcgaaat tcctgcgaat gcaacgccat ttccgcatcg tgcagggaac
     1381 ttgtttaaga ttcaatattc gttgaattgg gaggatccaa aatcgactga aatgtatttg
     1441 aatcaagcga agggtatgta tgaatttatg gcgacttatg tatcgaagaa tccaagaggt
     1501 gcatttctta attatagaga ttttgatatt ggtgtgaata cgggggatgg ttataattca
     1561 gggaaggttt atggtgagaa atattttaaa gggaactttg agagattagt gaagattaag
     1621 actactgttg ttgatcctga taatttcttt aggaatgaac aaagtattcc tactcaaaga
     1681 aaaccaaaac catga
//
LOCUS       XM_071831126             312 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840884), mRNA.
ACCESSION   XM_071831126
VERSION     XM_071831126.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..312
                     /gene="LOC139840884"
                     /note="uncharacterized LOC139840884; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840884"
     CDS             1..312
                     /gene="LOC139840884"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687227.1"
                     /db_xref="GeneID:139840884"
                     /translation="MAFKKDGQMVDENMIVLRERIRKIEAETECDNQYPDNWMEWEKT
                     YVYNGGYHSDVYEAVAFLQRFFMDNRPSVVLGLVVFFALGGSIGMITVLQWLINSVHG
                     N"
ORIGIN      
        1 atggcgttca agaaagatgg acaaatggtt gatgaaaaca tgattgtttt acgcgaaagg
       61 attcgtaaga tagaggctga aaccgaatgc gataatcagt atcctgataa ttggatggaa
      121 tgggaaaaaa catatgttta caatggtggg tatcattctg atgtttatga ggcggttgcg
      181 tttttacaaa ggttttttat ggacaacagg ccgagtgtgg tgttgggact ggtggtgttt
      241 ttcgcattgg gtggttcgat tgggatgatc acagttttgc agtggctgat aaattcggtt
      301 catggaaact aa
//
LOCUS       XM_071831127             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 8-like (LOC139840885), mRNA.
ACCESSION   XM_071831127
VERSION     XM_071831127.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139840885"
                     /note="protein FAR1-RELATED SEQUENCE 8-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840885"
     CDS             1..570
                     /gene="LOC139840885"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 8-like"
                     /protein_id="XP_071687228.1"
                     /db_xref="GeneID:139840885"
                     /translation="MGTRRGKQTKEFVLGRCKAAYEEFGDIVTFDTTYLTNKYEMPMA
                     PFVGVNHHGQSILFGCGLISNEDVRTFTWIFRTWLSCMSGRAPNAIITDQDQEMKNSI
                     EIVFPGIRHRYMCLWHITKKIPEKLGKLKKYKLIKYKLKKNLYGSLTPSEFEAAWKTT
                     LKQFVEQYENAMKDRVEKENIEDFNSYNS"
     misc_feature    79..366
                     /gene="LOC139840885"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgggaacta gacgaggaaa acagactaaa gagtttgttt tgggcaggtg taaggcagct
       61 tatgaggaat ttggggacat tgtgacattt gatacaacat acttgacaaa taagtatgag
      121 atgccaatgg ctcctttcgt aggggtaaat catcatggac aatcaatatt atttggttgt
      181 ggattgatat caaatgaaga tgttagaaca tttacatgga tctttcgaac ttggctatcg
      241 tgtatgtcgg gacgtgctcc taatgccatt attactgacc aagatcaaga aatgaaaaat
      301 tcaattgaaa ttgtatttcc tggtatacgc cacaggtaca tgtgtttgtg gcatatcacg
      361 aaaaagattc ctgaaaaatt gggcaaatta aaaaaataca aattaatcaa gtacaagctt
      421 aaaaagaatt tgtatggttc tttgactcct agtgaatttg aagctgcctg gaaaactaca
      481 ctaaagcaat ttgtggaaca atatgaaaat gcaatgaagg atagggttga gaaagagaac
      541 atagaagatt ttaattctta caattcatag
//
LOCUS       XM_071831128             420 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840886), mRNA.
ACCESSION   XM_071831128
VERSION     XM_071831128.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..420
                     /gene="LOC139840886"
                     /note="uncharacterized LOC139840886; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840886"
     CDS             1..420
                     /gene="LOC139840886"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687229.1"
                     /db_xref="GeneID:139840886"
                     /translation="MYADPRRCLVNFEVGDCVYLKVSPWKGVIRFGKRGKLAPRYIGP
                     FKIIQRVNDQTVVLGLPAELAGIHNTFNVCYLRKCKVDDETQLVPLSDLRVDLNQKLV
                     EEPVRIVDRKFRGKKRALEHQLVILGRTRQFCAAAAR"
ORIGIN      
        1 atgtatgccg atccacgtag atgtctggta aactttgagg tcggggattg tgtatacttg
       61 aaagtatcac cttggaaggg agttattagg tttggtaagc ggggtaagtt agctccaaga
      121 tacattgggc cgttcaagat tattcagagg gttaatgatc aaacggttgt attagggctt
      181 ccagcagagt tagcagggat acataacact tttaatgtgt gttaccttag gaagtgtaaa
      241 gtcgatgacg aaacacaact ggttccgttg agtgatttga gggtcgactt aaatcaaaag
      301 ttagttgaag aaccggttag gatagtcgat agaaagttta gaggtaagaa acgagctcta
      361 gagcaccaat tggtgatttt aggtcgaacc cgtcagtttt gtgctgctgc tgcacgatga
//
LOCUS       XM_071831129             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840887), mRNA.
ACCESSION   XM_071831129
VERSION     XM_071831129.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139840887"
                     /note="uncharacterized LOC139840887; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840887"
     CDS             1..813
                     /gene="LOC139840887"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687230.1"
                     /db_xref="GeneID:139840887"
                     /translation="MSEDGAVWQWRRTPIGSAAGDLVELNNLLSSFRFDRSLKDAWMW
                     SMSSDGMFKVKILASIIDQHILPSSSSQQSTLSNSLVPKKVKIFVWRALLRRLPVRTE
                     LDKRGIDLDSVLCQVCDDVVKTVDHSTIFFNQALEIWGQVFKWWDKWSFSTFSVRELF
                     EFNGSSSMLSFGKKVWQAMLWISAYLIWKNRNNKVFQSKCWNSPVALNEIQIISFERI
                     SNIWIEREKVRVAFMVTQSEFVSQFRLRRDATFASPCSCIVYYNFVLVSDVE"
     misc_feature    <241..396
                     /gene="LOC139840887"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtcagaag atggtgcagt ttggcaatgg aggcgcacac caataggcag cgcagcaggt
       61 gatcttgtcg agttgaacaa tctgttatca tcattcaggt ttgatcgcag cctcaaagac
      121 gcatggatgt ggtccatgtc atcagatggc atgtttaagg tgaagatact tgcttctata
      181 attgatcaac atattcttcc ttctagttct tcgcaacaga gcactcttag caatagtctc
      241 gtccctaaaa aagtcaagat cttcgtgtgg cgagctttgt tgaggagatt acccgtaaga
      301 actgaattag ataaaagagg gatagatctc gatagtgttc tttgccaggt atgtgacgat
      361 gtcgtgaaaa ctgttgatca ctcaactatt ttttttaacc aagctttaga gatttggggc
      421 caagttttta aatggtggga taaatggagc ttctctactt tcagtgttcg tgaattgttc
      481 gaatttaatg gttcgagttc aatgttgagt tttggaaaga aagtgtggca agctatgtta
      541 tggataagtg catacctcat ttggaagaac cgtaacaata aggtatttca aagcaaatgt
      601 tggaatagtc cggtagctct caacgagatt caaatcattt cttttgaaag gatttccaat
      661 atatggatcg agagggaaaa agttcgagtg gcattcatgg ttacacaatc cgagttcgta
      721 tctcagttcc ggctaagaag agatgcaacc tttgcatctc cctgttcttg tattgtgtat
      781 tacaatttcg tgttagttag cgatgtagag tag
//
LOCUS       XM_071831130            1656 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840888), mRNA.
ACCESSION   XM_071831130
VERSION     XM_071831130.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1656
                     /gene="LOC139840888"
                     /note="uncharacterized LOC139840888; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840888"
     CDS             1..1656
                     /gene="LOC139840888"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687231.1"
                     /db_xref="GeneID:139840888"
                     /translation="MGNSDMGPAFVCCQGVMEPRRSVTMPTKCHLEALWGVMILSFNI
                     RGFGKDDESESKKPKIGKSCGLMMIWDPTAFDVSEAINKPFIQAIKGRWQCKQKDTIV
                     INVYGPHKDNDKKRFWKILESVTDLPDVEWVIDGDFNEVCFQQERQNCYMFSERKTLD
                     HYPILLRDKNEDVGPKPFKVFNVWLENKKADNIVVEAWNKPVGGSRPDCILRNKLKNF
                     KEVLRVWSKTKYGVIDEEIESWKHKAESLESKAENNNISESERLERMNARNKWFKREK
                     EKCDMLRPKSRQKWCAEGGETTSYFHSSIRRKNNKSNIRGLHINGIWEENPNEIKKAI
                     FDHFQNCFKLHQSSKPRLETLNNFQFQKLNTCDAENLETPFLEEDIWNAIKDCDSNKS
                     LGPDGFNMYFFKCFYWLIKDDLQSDPLVWENGSKGCNASFFTLILKTNEILKLGDYRP
                     ISLIVSYYKIVSKILTHRVQKVISKIIGYEQSAFIKGRYILDSILVENEVIDATKKNK
                     TKGLIFKADFQKTFDSIHWEFLFKIMENMGFGKKNGSSGLKHA"
     misc_feature    1300..>1602
                     /gene="LOC139840888"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgggaaaca gtgatatggg acccgcattt gtctgttgtc aaggggtgat ggaaccaaga
       61 cgttcagtca caatgcctac aaaatgtcat ttagaggctt tgtggggcgt tatgatcctc
      121 tcctttaata tacgtggttt tggtaaagat gatgagtccg aaagcaagaa acctaaaatt
      181 ggaaaatcat gcggtctcat gatgatttgg gaccctactg cattcgatgt cagtgaagcg
      241 attaataaac ccttcatcca agcaatcaaa ggaagatggc aatgtaaaca aaaagataca
      301 atagtcataa acgtttatgg tccgcacaaa gataatgaca agaaaaggtt ttggaaaatc
      361 cttgaatcag taacagattt accggatgtg gaatgggtga tcgatggcga ttttaatgaa
      421 gtgtgtttcc aacaagaacg acaaaattgt tacatgttta gtgaaagaaa aacactagac
      481 cactacccaa tcctcttaag agacaagaat gaagacgttg gtccgaaacc atttaaagtc
      541 ttcaatgttt ggttggaaaa caagaaagca gacaatattg tagttgaagc ctggaataaa
      601 ccggttggtg gatcacgacc cgattgcata ctgagaaaca agttgaaaaa tttcaaagaa
      661 gtacttaggg tgtggagcaa aacaaaatat ggtgtgatag atgaggaaat tgaatcgtgg
      721 aaacataagg cagaatcgtt agaatcaaaa gcagaaaata acaacataag cgaaagtgag
      781 agattggaga ggatgaatgc aagaaacaaa tggttcaaaa gggaaaaaga aaaatgtgat
      841 atgctaagac cgaaatcaag gcaaaaatgg tgtgcggaag ggggcgagac cacctcatat
      901 ttccattcat caatccgaag aaagaacaac aaatccaaca taagaggttt gcatataaat
      961 gggatatggg aagaaaatcc aaatgaaata aaaaaggcca tcttcgatca ttttcaaaac
     1021 tgtttcaaac tacatcagtc atcaaaacca cgccttgaaa ccctcaacaa tttccagttt
     1081 cagaaactta atacatgcga tgctgagaat ctagaaacac ccttccttga agaagacatt
     1141 tggaatgcta tcaaagattg tgattctaat aaatcgctgg gaccggatgg attcaatatg
     1201 tacttcttta agtgttttta ttggctcata aaggatgatc tacaaagcga tccattggtt
     1261 tgggaaaatg gatcaaaagg ttgtaatgct tccttcttta ctctaattct taaaacaaac
     1321 gaaatattga agcttggtga ctatagacca ataagcctca tagtaagcta ctacaaaatc
     1381 gtatccaaga ttcttaccca tcgtgtccaa aaagtaatta gcaaaatcat tggctatgag
     1441 caaagtgctt ttattaaagg gcgatacatc cttgatagca tactagtgga aaatgaggtt
     1501 attgatgcaa caaagaaaaa caagacgaaa gggttgattt tcaaagccga cttccaaaaa
     1561 actttcgata gtattcattg ggaattctta ttcaagataa tggaaaacat gggttttggc
     1621 aaaaaaaatg gatcaagtgg attgaaacat gcttga
//
LOCUS       XM_071831131            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139840889), mRNA.
ACCESSION   XM_071831131
VERSION     XM_071831131.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139840889"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139840889"
     CDS             1..1038
                     /gene="LOC139840889"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071687232.1"
                     /db_xref="GeneID:139840889"
                     /translation="MSQSLLEKMIKCILSYSTCPDAPKWFAYFQQRPDARGVLGVSSI
                     LKVTSAIRQLAYGDSPDLFDEYLQISERTSRESLQNFTRCIIDLYANVYMREPTEDDI
                     HRLYHKHEELHGFPGMLGSIDCMHWAWGKCPNVWKGHFTRGDHDYPTIMLEAVASYDN
                     WIWHAYFGMVGSNNDLNVLNASPLFDSLLTDTAPQFPYEIGDVDFDRGYYLADGIYPS
                     WASFVKGFSSVVDAKRKYFTKKQSAARKDVERIFGILQGRWGILRQPARAYSVNKIKR
                     IMYGCIILHNMIIEDNGFNIAENKSYYLPVNNLQGSTWSERCDVYAEKTKELRDKDEH
                     EYLRHTLVSHR"
     misc_feature    277..879
                     /gene="LOC139840889"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcacaaa gtcttcttga aaaaatgatt aaatgtatac tttcttactc tacttgtcct
       61 gatgcaccaa agtggtttgc ttattttcaa caacgtcccg atgcacgtgg tgttcttgga
      121 gtatcttcta ttttaaaagt cacatctgcc attcgtcaac tagcatacgg tgattcaccg
      181 gatttatttg acgaatattt acaaatttca gagagaacat cacgtgagtc tttgcaaaat
      241 tttacaagat gtattataga cttgtatgct aatgtataca tgagagaacc gaccgaggac
      301 gatatacatc ggttgtatca taaacatgaa gaacttcacg gctttcctgg aatgcttgga
      361 agcatcgatt gtatgcattg ggcttgggga aaatgtccaa atgtatggaa agggcatttc
      421 acccgaggcg atcacgatta cccgacaatc atgttggaag ccgttgcatc gtatgacaat
      481 tggatttggc atgcatattt tggaatggtc ggttcgaaca atgatttgaa tgtccttaat
      541 gcatctccat tgtttgatag tttgctaact gacacagctc ctcaatttcc atacgaaatt
      601 ggggacgttg attttgatcg aggctactat cttgccgatg ggatttaccc ttcgtgggct
      661 tctttcgtta agggattctc aagtgttgtt gacgcaaaaa ggaaatactt tacaaagaaa
      721 caatctgcag ctcgtaaaga cgttgagagg atatttggaa ttttgcaagg tcgttggggt
      781 attttaagac aacctgctag ggcatatagc gtaaacaaaa tcaaaagaat catgtatggt
      841 tgcatcatat tgcacaacat gataattgaa gacaatggtt ttaacatcgc tgaaaataaa
      901 tcttactact tgcctgtcaa caacctacaa ggatcaactt ggtccgaaag gtgtgatgta
      961 tatgccgaga agacaaaaga gctacgtgac aaagacgagc atgagtatct tcgacatact
     1021 ctagtttcgc atcgatag
//
LOCUS       XM_071831132            1128 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840891), mRNA.
ACCESSION   XM_071831132
VERSION     XM_071831132.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1128
                     /gene="LOC139840891"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840891"
     CDS             1..1128
                     /gene="LOC139840891"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687233.1"
                     /db_xref="GeneID:139840891"
                     /translation="MTEEYNALINNSTWTLALRPSNTNIVRSMWLFKHKYNADGTLNS
                     QQVGIDCDETFSPVDKPATIRTVLSLAISRYWPVHQLDVKNIFLHGNLSETIYMHQPP
                     GFRDPSHPDHCLSNRHGTYTAYLLLYVDDIILTASSTTFLQRVISSLHKEFSMTDLGP
                     LNYFLGISVTRTSSERADMLGCHPYRTPVETSAKLTASGPTVSDHTLYRSLAGAPQYL
                     TFTGHDISYAVQQVCLFMHDPREAHLSALKRILRYIQGTLILGLQLLASPTTSLVAYS
                     DAGWAGCHSTRRSTSRYCVFLGNNLLSWSSKRQHIPSRSSAETEYRGVANAVAETCWL
                     RNLLRELHSPLFSATIVYCDNVSAVYMSGNPVSIREQSTLR"
     misc_feature    31..570
                     /gene="LOC139840891"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    817..>1101
                     /gene="LOC139840891"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(829..840,943..951,958..960,1060..1062)
                     /gene="LOC139840891"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaccgagg aatataatgc tttaattaat aatagtactt ggactcttgc gttgcgaccc
       61 tcgaacacga acattgttcg ctccatgtgg ttgttcaagc acaaatacaa tgcagatggg
      121 actttaaaca gtcaacaggt tggtattgat tgtgatgaga ccttcagtcc ggtggataaa
      181 ccggccacta ttcggacagt tctcagttta gctatttctc gatattggcc cgttcatcag
      241 ctagatgtca agaacatttt tcttcatggt aacttatctg aaactatcta catgcatcag
      301 ccaccaggtt tccgtgatcc ctctcatcca gatcattgtt tatctaacag acatggtaca
      361 tacactgcat accttttact atatgttgat gacatcattt taactgcttc atccacgacc
      421 tttctacaac gtgttatttc ctccttacac aaggagtttt ctatgacgga tcttggacct
      481 ttgaactatt ttttgggtat ctctgttaca cgcacctcta gcgagcgtgc cgatatgctt
      541 ggatgtcatc catataggac acctgttgaa acaagtgcca aacttacagc tagtggccca
      601 acggtctctg atcacacttt ataccgtagt ctagcaggtg ctcctcagta tctcactttc
      661 acgggccatg atatttcata cgcagttcag caggtttgtt tgtttatgca tgatccacga
      721 gaggctcacc tttctgcctt aaaacggatt cttcggtaca ttcagggtac actcattctc
      781 ggccttcagc ttcttgcttc acctaccact tctctagtgg catattcaga tgctggttgg
      841 gctggttgcc actcaacccg tcgttctaca tccaggtact gtgttttctt aggtaacaat
      901 cttctctcgt ggtcctccaa gcgtcaacac attccgtccc gctcgagtgc tgagacagaa
      961 tatcgaggtg tggctaatgc agttgcagag acttgttggc ttcgcaacct tcttcgagag
     1021 cttcatagtc ctctattttc agctaccatt gtttactgtg ataatgttag tgcagtttat
     1081 atgtccggga acccggttag catcagagaa caaagcacat tgagatag
//
LOCUS       XM_071831133            2247 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RUN1-like (LOC139840892), mRNA.
ACCESSION   XM_071831133
VERSION     XM_071831133.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2247
                     /gene="LOC139840892"
                     /note="disease resistance protein RUN1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 47 Proteins"
                     /db_xref="GeneID:139840892"
     CDS             1..2247
                     /gene="LOC139840892"
                     /codon_start=1
                     /product="disease resistance protein RUN1-like"
                     /protein_id="XP_071687234.1"
                     /db_xref="GeneID:139840892"
                     /translation="MAPLRANGSRYDVFLSFRGEDTRYGFTDHLNEALKLAGTLTFRD
                     SDDAERGEKLKSEIEKEIKSSDASIIVLSANYAISTWCLDELSLILDQRRDCNHFVLP
                     VFYHVDPSDVGNHRGSFMIEVKPSERWTEDNVNKWKAALTEVSSVIGMPVDGYNTFNI
                     AFLFCRIISFVCYMPETKFIKEVVNKVYNRLDRKQFFIPPNLTGMDARYKEILNCWLT
                     TQSSEAEILIINGMPGSGKSTLAQYIVYTYGQHYESSSIVENIGGRCENSRETVKLQQ
                     QLCSDISRGKHRKIHTVCQGTAEIEMLLAMTKVLVVLDDIVEEHQLDDFIGYGNINKE
                     SKIIITTKVDTSSWFMSTYRRFQEYKMKLLSDDESLELFSLHAFRSKRPKDGYQELAQ
                     QVVQYCDGNPLALRVLGSSLSQKNSVALWESELSLDLLPDLERELLLHIACFFVAEDV
                     DYVVKILEPDYSAKSRIETLIKRSFLYVTSENKIMMHRLLQTMGRTFVDRESSTVAKR
                     SRVWRNKDSYNMIRRKESSRTVGLALDIQMLMKENGFGTRELKELDYPTHSSGFHGSI
                     CFQIYMLDNRSRRDDLLGFQMLFNGNQMDELKLLKLGFVKFNGLYEDISVHLRWLCWV
                     GFSESMIHTEIFMGNMVALDLSYSCLKEFEPPTVLHTLKILNLKESHSLLKIHNIHQI
                     PNLENLILKNCRNLFHICGAIGNLEKLAVLNMTGCLKLNKMEQERQRRKMDLTLTSFE
                     LLKNVPND"
     misc_feature    31..>2160
                     /gene="LOC139840892"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
ORIGIN      
        1 atggctcctc taagggctaa tggtagtagg tatgatgtat ttctaagctt tagaggcgaa
       61 gatactcgtt acggttttac cgatcatctt aatgaagcct taaagctagc agggactttg
      121 acattcagag atagtgatga tgccgaaaga ggtgaaaaat tgaagtcaga aattgagaaa
      181 gaaatcaaat catctgatgc ttcaataatt gtgttgtctg caaactatgc aatttcaact
      241 tggtgccttg atgaactttc attgatcctt gaccaaagaa gagattgcaa tcatttcgtt
      301 ttacccgttt tttatcatgt ggatccttca gatgttggta accacagagg aagtttcatg
      361 attgaagtta agccctctga acggtggacc gaagataatg tcaataagtg gaaggccgcc
      421 cttactgagg tttccagtgt gattggcatg cctgttgatg ggtacaatac ttttaatatt
      481 gcatttcttt tttgtagaat aatttccttt gtgtgttaca tgcccgaaac aaaatttata
      541 aaggaggttg tcaacaaagt atacaataga cttgatcgca aacagttttt tattccaccc
      601 aatttaacag ggatggatgc ccgatataaa gagatactaa attgctggtt aacaacacaa
      661 tcatctgaag ccgaaatttt aataataaat ggcatgccag gaagtggcaa gtcaacgttg
      721 gctcagtaca tcgtgtatac ttacggtcag cattacgaaa gcagtagcat tgttgaaaac
      781 attggaggta gatgtgaaaa ctcacgtgaa acggttaaac tccaacaaca gctttgcagt
      841 gacatttcaa gaggcaagca cagaaaaata catactgttt gtcagggtac tgctgagatc
      901 gaaatgctat tggcaatgac aaaagtactt gtggttttgg atgatattgt tgaagagcat
      961 caattggatg attttattgg atacggtaat attaacaaag aaagcaagat tataataacc
     1021 acgaaagttg atacaagtag ttggtttatg tccacatata ggaggtttca agagtacaaa
     1081 atgaaattac tgagtgatga tgaatcatta gagcttttta gtcttcacgc tttccggtct
     1141 aaacgtccaa aagacggtta ccaagagctt gcacaacaag tggtacagta ttgtgatgga
     1201 aatccgctgg ctcttagagt gttaggatcc tcgttgtctc aaaaaaacag tgtcgcatta
     1261 tgggaaagcg aattgagtct tgatttgtta ccagacttgg agagagagtt gcttttgcat
     1321 atcgcttgtt tctttgttgc cgaagatgtg gattatgttg ttaaaatatt ggagcctgat
     1381 tactctgcca agtctagaat cgaaactcta attaaaagat catttttgta tgttacatca
     1441 gaaaataaaa taatgatgca tagattgctt caaactatgg ggagaacctt tgtggataga
     1501 gaatcatcaa cagttgccaa acgtagcaga gtttggcgta acaaggactc ttataatatg
     1561 ataagaagaa aagagagttc aaggaccgta ggtctagcac ttgatattca aatgctgatg
     1621 aaagagaatg gtttcggtac cagagagtta aaagagcttg attatcccac tcattcttct
     1681 ggttttcatg gttctatttg tttccaaata tacatgttag ataacaggtc aaggagagat
     1741 gatctattag gatttcagat gcttttcaat ggaaatcaaa tggatgaact gaaattgctc
     1801 aagctcggtt ttgtgaaatt caacggattg tatgaggaca tatctgtaca tttaagatgg
     1861 ctctgctggg ttggatttag cgaaagtatg atccatactg agatattcat gggcaacatg
     1921 gttgctttag atttgagcta tagttgcttg aaagaatttg aaccacccac ggttcttcat
     1981 acacttaaga ttcttaatct aaaggagtcg cacagtctct taaaaatcca caacattcac
     2041 cagatcccta atcttgagaa tttgattctc aagaactgtc gcaatctgtt tcatatttgt
     2101 ggggccattg gtaaccttga aaaacttgct gttttgaaca tgacagggtg tttaaagctg
     2161 aacaagatgg agcaagaaag gcaaaggaga aagatggatc ttacattgac ttcttttgag
     2221 cttttaaaga atgtgccaaa tgattaa
//
LOCUS       XM_071831135             621 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At2g39510-like (LOC139840894), mRNA.
ACCESSION   XM_071831135
VERSION     XM_071831135.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..621
                     /gene="LOC139840894"
                     /note="WAT1-related protein At2g39510-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139840894"
     CDS             1..621
                     /gene="LOC139840894"
                     /codon_start=1
                     /product="WAT1-related protein At2g39510-like"
                     /protein_id="XP_071687236.1"
                     /db_xref="GeneID:139840894"
                     /translation="MTISIFIKIMVLGLLEPVIYQNLYYSGMNLTTVTFATAMCNIVP
                     AITFVMAWILRLEKVKMESLHSQGKIIGTLVTVGGAMIMTLITGPVIQFPWTYQHTIH
                     QQSSVNTKSSHDQIKGSLMITAGCFSWASFVIVQGTNEGLHQGYCVVPSAKRFLLTYI
                     VIFKWNVLIFTGNKSSRNELLRSLIRARISGSWIDPYWFNGSNGSS"
     misc_feature    <1..>402
                     /gene="LOC139840894"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
ORIGIN      
        1 atgactattt ccatcttcat caagattatg gttctgggac tactagagcc tgtgatatac
       61 cagaatttgt actattctgg aatgaattta acaacggtaa cctttgcaac ggctatgtgt
      121 aacatcgtcc ctgccattac ttttgttatg gcttggatct taagacttga gaaggtgaag
      181 atggagagtt tacatagcca agggaagatc ataggtacat tagtgacggt tgggggagcg
      241 atgataatga cactaataac gggccccgtg attcaatttc catggacata tcagcatacg
      301 attcatcaac aatcttcggt taacaccaaa agttctcatg atcagattaa gggatctctc
      361 atgattactg ctggttgctt ttcttgggct agctttgtca tagtccaagg gactaatgaa
      421 ggtctacatc aaggttactg tgtggtgcca agtgcaaaaa gattccttct tacttatata
      481 gttatattca agtggaatgt tttgatattc acgggaaaca aaagcagcag aaacgaactt
      541 ctacgttctt tgatacgagc aaggataagt ggctcatgga tcgatccata ttggtttaat
      601 gggtcaaatg gtagcagttg a
//
LOCUS       XM_071831136             552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840895), mRNA.
ACCESSION   XM_071831136
VERSION     XM_071831136.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..552
                     /gene="LOC139840895"
                     /note="uncharacterized LOC139840895; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840895"
     CDS             1..552
                     /gene="LOC139840895"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687237.1"
                     /db_xref="GeneID:139840895"
                     /translation="MVKDCSVLVDKVILPRAVNSIESLRNGLVPKKVEVFIWRARLGR
                     IPVRFELDKRGIDLNSVRCPICDGDIETVEHILFSCQMAKDIWAKVLKWWGYNSALFG
                     YEDIFNGTFGYVAHDHKRNQWQAVCWVVCYIIWKNRNAKVFKNKLETVPSLFSEVQVL
                     SYDWISRRCKGHIMDWLQWFSQP"
     misc_feature    <85..258
                     /gene="LOC139840895"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtcaagg actgttcggt tctagtggac aaagtcatcc taccacgtgc ggttaattca
       61 attgagtcgt tgcgaaatgg tttggttcca aaaaaagtag aggtgtttat ttggcgggcg
      121 agattaggtc gtataccggt aaggttcgag ttagataaac ggggcatcga tttgaacagc
      181 gtgagatgtc cgatttgtga tggtgacatt gagacggtgg aacatatact tttttcttgt
      241 caaatggcca aagacatatg ggcgaaagtc cttaaatggt gggggtataa ttcggcttta
      301 ttcgggtatg aggatatttt taatggtacc ttcggctacg tagcacatga tcacaaaagg
      361 aaccaatggc aagcggtttg ttgggtggtt tgttacatta tatggaagaa tcgaaatgca
      421 aaggtgttca agaataagct cgagacggtc ccatctttat ttagcgaggt tcaagttctt
      481 tcatacgatt ggatttcacg acgttgcaag ggtcatatta tggattggct tcaatggttc
      541 tcacaacctt ag
//
LOCUS       XM_071831137            1311 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139840896), mRNA.
ACCESSION   XM_071831137
VERSION     XM_071831137.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1311
                     /gene="LOC139840896"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840896"
     CDS             1..1311
                     /gene="LOC139840896"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071687238.1"
                     /db_xref="GeneID:139840896"
                     /translation="MEKTFKMLQFLIDDDSDDEKIVNFVSSLAEEEVEGEASSSRVPR
                     TRVYIPRDRESAADRLFNDYFADSPVYPENKFKRRFRMSRQLFLRIVEGISNFNSSDI
                     PEYFMYFRERPDAAGRQSLTILQKCTAAIRQMAYGTTPDMFDEYIKIGEKTAALCLDY
                     FCKCVFHLFAREYLRKPTAEDIARLYNFHAQKHGLPGMLGSIDCMHWEWKNCPVAWQG
                     QYTRGDQKGPSIMLEAVASQDLWIWHGFFGMAGANNDINVLNASPLFNSIKDGTAPPS
                     PFDVNGHHYDRGYYLGDGIYLDWAMLVKAPHSPIDEPQKKIKRFQESARKDIECAFGV
                     LQGRFAMLKTPARSLDFNKIRRHMYACLVLHNMIQENNGFVIGRREERMIERNPPRRL
                     QRDLRDRDARVKEIRDRQVHRKLEADLTEHVWNLSPYFRTANDE"
     misc_feature    514..1119
                     /gene="LOC139840896"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggagaaaa cgttcaagat gctccagttt ttaattgatg acgattcgga tgatgaaaaa
       61 attgttaact ttgttagtag tttggccgaa gaagaagtgg agggagaagc tagtagttcg
      121 cgagtccctc gaacccgagt ttatattcca agggatcgtg aaagtgcggc tgacaggtta
      181 ttcaatgatt attttgcgga ttcaccagtg tatccggaaa acaaattcaa acgacgtttt
      241 cgaatgagtc gtcaattatt tctccgaata gtcgaaggta tatctaactt taatagtagt
      301 gatattcccg aatattttat gtattttaga gaacgtcccg atgccgctgg tcgtcaaagt
      361 ttgacaatat tacaaaagtg taccgcggcc atacgtcaaa tggcgtatgg aactacacct
      421 gatatgtttg acgaatacat aaaaattggt gagaaaactg ctgctttatg tttagattat
      481 ttttgtaaat gcgtatttca tttgtttgcg agagaatatt tgagaaagcc aacagccgaa
      541 gatattgctc ggctatataa ttttcacgcc caaaaacatg gtttacccgg tatgcttggt
      601 agtattgatt gtatgcactg ggagtggaag aattgtcctg ttgcatggca aggacaatat
      661 actagaggtg atcaaaaggg accatccatt atgcttgaag cagtcgcatc tcaagatttg
      721 tggatatggc atggattctt tggtatggca ggtgcaaaca acgacattaa cgttttaaat
      781 gcctcaccgt tgttcaacag tataaaggac ggcaccgctc ctccttcacc atttgatgta
      841 aatgggcatc actacgatag agggtattac ctaggtgatg gtatatacct tgattgggct
      901 atgttggtca aagcacctca ttctcctatt gacgaaccgc aaaaaaaaat taaacggttt
      961 caagaaagtg ccagaaaaga tattgagtgt gcatttggag tattacaggg tagatttgca
     1021 atgttaaaaa caccggcaag atctttggac ttcaacaaaa ttagaagaca tatgtatgcc
     1081 tgtctcgtat tacataacat gattcaagaa aataacggat ttgttatagg taggagagaa
     1141 gaaagaatga tagaaaggaa cccaccacga cggttacaaa gggatttgag ggatcgagat
     1201 gcaagggtta aggaaataag agataggcaa gttcacagaa agttagaagc agatttaacc
     1261 gagcacgttt ggaacttatc cccttacttt cgtactgcta atgatgagta g
//
LOCUS       XM_071831138            1773 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840897), mRNA.
ACCESSION   XM_071831138
VERSION     XM_071831138.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1773
                     /gene="LOC139840897"
                     /note="uncharacterized LOC139840897; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840897"
     CDS             495..1598
                     /gene="LOC139840897"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687239.1"
                     /db_xref="GeneID:139840897"
                     /translation="MLGAGLQFGRSRGGEDRFYNPAKARSNRKNQDNLRRAQSDVTPA
                     QSTPASVPEELENRVVMPSKTSPVESPVPSPVCNLERFLDSIRPSVPAQYPSKRAMKG
                     WRMHDERQPYFVLGDLWESFKEWSAYGAGVPIILNDSDSVVQYYVPYLSGIQLYMDPL
                     KSSAKSRQHSEDSDVDSYRDSSSDASSDYELPKSDINYQHAFQDEGESARLQSCLLFE
                     YLERNQPWGREPLTDKILDLAICFPELKTVSSCDLLPSSWLSVAWYPIYRIPMGPTLK
                     DLDACFLTFHALHTPVEGNQCEHPPVVMHPVDTDSPPKISLPVFGLASYKLKAPLWIN
                     NERTLLSPLLQAADNWLATLQVNHPDFLFFSRR"
     misc_feature    723..1586
                     /gene="LOC139840897"
                     /note="Protein of unknown function (DUF789); Region:
                     DUF789; pfam05623"
                     /db_xref="CDD:461695"
     polyA_site      1773
                     /gene="LOC139840897"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacccatcca tccatccatc cattttcttc agacactgat gattttaatc taaattcttc
       61 attcccaatc actttcattt cccccattcc gattcccctt ctcaattccc attcccttca
      121 ccgcatcaca ttcacaattt caaactcaat ctcaatcatc cacccacaat caatttcgtt
      181 tccaattatt catcatttca tcatccgtaa attttgattt ccccaatcta tcaagttata
      241 attagggttt ttcaaatcct ccaaccgatt aatcgatatt agctcaccgt tgttatgcga
      301 taaatcatcg tcaaataacg cgttgtcttg ttagccttag ggtttgtgtt tcgattcttc
      361 agtttagact aaaagttgaa tcaaaatcat cttagagaat ataagtttgt cgaaattaat
      421 cgtgtttgat taggtttacg aatcttaatt tggatttatt aatttaggag ttgtaattta
      481 gggttttaca gaagatgtta ggagctggat tacagtttgg acggagtcgt ggtggagaag
      541 ataggtttta taatccggcg aaagctagaa gtaatcgtaa aaatcaggat aatcttcgaa
      601 gagctcaaag tgacgtcact ccggctcaat ctacgccggc gtccgtccct gaggagctgg
      661 agaatagagt tgtgatgccg tcgaagacgt cacctgttga atctccggtt ccgtctccgg
      721 tttgtaatct ggaacggttt ttggattcga ttaggccttc tgttcctgct cagtatcctt
      781 ctaagagagc tatgaaaggg tggaggatgc atgatgaacg tcaaccgtat tttgtgctcg
      841 gtgatctgtg ggagtctttt aaagagtgga gtgcttatgg tgctggagtt cctataatat
      901 tgaatgattc tgatagtgtg gttcagtatt atgtacctta cttgtctggt attcagttat
      961 acatggaccc tttgaagtca tcagcaaaat ccaggcaaca tagcgaggac agtgatgttg
     1021 actcatacag ggactcaagt agtgatgcaa gtagtgatta tgagctgcca aagagtgata
     1081 taaattacca acatgccttt caagacgagg gtgaatctgc aaggcttcaa agttgtctct
     1141 tatttgagta tctggagcgc aatcaaccat ggggccggga acctttgact gataagatac
     1201 ttgatcttgc tatctgcttc cctgaattga aaactgttag cagttgtgac ttgctacctt
     1261 ctagttggtt atcagtggca tggtatccaa tttataggat tccaatgggg ccaacattga
     1321 aagatctcga tgcttgcttt ctcacatttc atgctcttca tacacctgta gaaggcaatc
     1381 aatgtgagca tccacccgtt gtgatgcatc ctgttgacac agatagcccc ccgaaaattt
     1441 cgttacctgt gtttggtctt gcttcatata agttaaaagc accattgtgg atcaacaatg
     1501 aacgcacgtt gctgagtcct cttttgcagg cggctgacaa ttggctggca acccttcagg
     1561 tcaatcaccc agattttctt ttcttttccc gtagatgatg atgatgatga taatggtatt
     1621 tttgaatttg ccgtaactct aaattattct agtatgtatc gtgcccattg tggtggcaag
     1681 ttaacgtttt taactacaat atcaagtggg agacaggaaa aaaaaagatg gcaataaggg
     1741 ttagagatgc agtattagat ataaatatag aga
//
LOCUS       XM_071831139            1047 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840898), mRNA.
ACCESSION   XM_071831139
VERSION     XM_071831139.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1047
                     /gene="LOC139840898"
                     /note="uncharacterized LOC139840898; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840898"
     CDS             1..1047
                     /gene="LOC139840898"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687240.1"
                     /db_xref="GeneID:139840898"
                     /translation="MNALMRTSSLSESENAFFSKCKNKCSTLVDFYSRFEAAMERQRH
                     TNRLLEYEMENKLVKLATTQRIEKHARDTYTPSVFLLVQDEICRSSSSCYQTNSRVEG
                     DKLICVIQEKFPEPRPKWDYHVEFNEKTFECDCSCLLFVREGRLCRHVFVVYYINEVH
                     AIPDQYILKRWSKGASEVFNSIASELNPFVSSYRVKKELLNKFRKALFFLKDDTEKLE
                     LLRDKFDVFISEFFNQDDDTAPSRFAAIEQLYGFPMPALANVHGPKGVRNKGERSNKG
                     ESSNKRYLHAVERNGKKRRACKKCGILGHNRRGCDKRNAGKQKMKLVDEDDEYDEDYD
                     SMYEQHEEVGESQD"
     misc_feature    <7..>525
                     /gene="LOC139840898"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgaatgctt tgatgagaac ttcttcactt tcagagagtg agaatgcatt tttcagtaaa
       61 tgcaagaata aatgttctac tttagttgat ttttattcaa ggtttgaggc ggcaatggaa
      121 aggcaaagac atactaatcg tcttcttgaa tatgaaatgg agaacaaatt ggttaaactt
      181 gcaacaactc agcgcattga gaaacatgct agggatacat atacccctag tgttttttta
      241 cttgttcaag atgaaatctg cagatcttcc tcttcatgct atcaaacaaa ttctagagtt
      301 gaaggagata agctaatttg tgtaattcaa gaaaagtttc ctgaaccacg tcctaagtgg
      361 gattaccatg ttgaatttaa tgagaagaca tttgaatgtg attgctcgtg tttgttattt
      421 gtacgtgaag gacgtttgtg tcgtcatgtt ttcgttgttt attatataaa tgaagttcat
      481 gctattcctg atcaatatat tctgaagaga tggtcaaagg gagcgtctga agtattcaat
      541 tccatagctt ctgagttaaa tccgtttgtt tcatcttata gggttaagaa agagttgctc
      601 aataaattta gaaaagcact ctttttcttg aaggatgata ctgaaaaact tgagctatta
      661 agagacaagt ttgatgtgtt tattagtgaa ttttttaatc aggatgatga tacagcgcct
      721 tctagatttg ctgcaattga gcagttgtat ggtttcccta tgcctgctct tgctaatgtt
      781 catggtccaa agggcgtgcg taacaaaggt gagagaagta acaaaggtga gagtagtaac
      841 aagagatact tacatgctgt tgagagaaat ggtaagaaga gaagggcatg caaaaaatgt
      901 ggtattcttg gtcataatag gagaggttgt gacaaaagaa acgctggtaa acaaaagatg
      961 aagcttgttg atgaagatga tgaatatgat gaagactatg actcgatgta tgaacaacat
     1021 gaagaagttg gtgaatctca agattga
//
LOCUS       XM_071831140             558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139840899), mRNA.
ACCESSION   XM_071831140
VERSION     XM_071831140.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..558
                     /gene="LOC139840899"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840899"
     CDS             1..558
                     /gene="LOC139840899"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071687241.1"
                     /db_xref="GeneID:139840899"
                     /translation="MLFDLNTKTNVGATTAYNIISDLNGGFSLVGPSSVDFQNFRLDM
                     NRYVGESDAHIFIENILRKQEVLPNFTCEYKCSNDGTLLGVFWSDYVSKVNYQEFGDI
                     VSFDETYKTNKDKMVFVTLTGIDNHKKLVCFGAALLTGESIELFNWFLDCFLKTFGNE
                     PSLVVTDHDPAMKEAIDLKFKHTKH"
     misc_feature    <154..>555
                     /gene="LOC139840899"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgttgtttg atttaaatac taaaactaat gttggtgcta ctacagctta taacattatc
       61 tcagatctta atggtggttt tagtctggtt ggtccttctt ctgttgattt tcaaaacttt
      121 aggcttgaca tgaatcggta tgtaggtgaa agtgatgcac acatttttat agagaatatt
      181 cttcgaaagc aagaagtttt accaaacttc acttgcgagt ataaatgtag taatgatggt
      241 actttacttg gagtattctg gtctgattat gtctctaaag ttaattatca agagtttggt
      301 gatatcgtgt cttttgatga aacttacaag acaaacaagg acaagatggt gtttgttact
      361 cttactggaa ttgataatca taagaaactt gtgtgttttg gtgctgctct acttactggt
      421 gaaagtattg aattgtttaa ctggtttcta gactgtttct tgaaaacttt tgggaatgaa
      481 ccttcattag ttgttaccga tcatgatcct gcaatgaaag aggctattga tttgaaattt
      541 aaacatacaa aacactga
//
LOCUS       XM_071831141             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840900), mRNA.
ACCESSION   XM_071831141
VERSION     XM_071831141.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139840900"
                     /note="uncharacterized LOC139840900; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840900"
     CDS             1..585
                     /gene="LOC139840900"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687242.1"
                     /db_xref="GeneID:139840900"
                     /translation="MASSSTAPAIPTFNGLHYHIWAVKMKTYLKSQGLWKVVETNEDP
                     PALRANPTVAQLRNYEEELLKKDKTLTCLHSGLADQIFTSIMELDTPKAMWDKIQDTY
                     EGSDRVKAVRLLTLRREFELLKMNDDELVKDYSSRIMDVVNQIRLHGDKISDQKVVEK
                     IMISVPQKFETKISAIEESCDISMLTVSELTSKL"
     misc_feature    37..117
                     /gene="LOC139840900"
                     /note="Domain of unknown function (DUF4219); Region:
                     DUF4219; pfam13961"
                     /db_xref="CDD:433608"
     misc_feature    226..582
                     /gene="LOC139840900"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggcatcta gttcaactgc tccagcaatt ccaacattta atgggttgca ctatcacatt
       61 tgggcagtaa agatgaagac atatttgaag tctcaaggtt tatggaaggt tgtagagact
      121 aatgaagatc ctccagcact cagagcaaac ccaactgttg ctcaactaag aaattatgaa
      181 gaagagttgc tgaagaaaga taagacactt acctgtttac attcaggact tgctgatcaa
      241 attttcacct caataatgga gttggacaca ccaaaagcca tgtgggataa aatccaagat
      301 acctatgaag gttctgatag agtaaaagct gtcagattat tgactctcag acgagagttt
      361 gaattgttga aaatgaacga tgatgaactc gtgaaagatt attcatcccg aataatggat
      421 gttgttaatc aaattagact tcatggtgac aagatttcag accagaaagt ggtggagaag
      481 ataatgataa gtgtccctca aaagtttgaa accaaaattt ccgcaataga agaatcttgt
      541 gatattagca tgcttacggt ttctgaacta accagtaagc tttaa
//
LOCUS       XM_071831142             327 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840901), mRNA.
ACCESSION   XM_071831142
VERSION     XM_071831142.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..327
                     /gene="LOC139840901"
                     /note="uncharacterized LOC139840901; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840901"
     CDS             1..327
                     /gene="LOC139840901"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687243.1"
                     /db_xref="GeneID:139840901"
                     /translation="MDLWNRIFAWWKIGNFSNLSGNEILRGNGPAQLTSQGKLVWQAV
                     EWVTAYYIWKNRNNMVFRGKMWNVPVTFNEIHAKSFEWISQRSKSKRKLQWLEWITNP
                     SIYLNM"
ORIGIN      
        1 atggatcttt ggaaccgtat ctttgcttgg tggaaaatcg gtaacttctc aaatctaagt
       61 ggtaatgaaa ttcttcgagg taatggaccg gctcaattga caagtcaagg aaagctcgtg
      121 tggcaagcgg ttgaatgggt gaccgcgtac tatatttgga aaaatagaaa taatatggta
      181 tttcgtggca agatgtggaa cgtcccggtg acttttaacg aaattcatgc caaatctttc
      241 gaatggattt cgcaaagatc aaagtcaaaa cgcaagcttc aatggcttga gtggataact
      301 aacccatcga tttatcttaa catgtaa
//
LOCUS       XM_071831143            1472 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein BCCIP homolog
            (LOC139840902), mRNA.
ACCESSION   XM_071831143
VERSION     XM_071831143.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1472
                     /gene="LOC139840902"
                     /note="protein BCCIP homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840902"
     CDS             142..1149
                     /gene="LOC139840902"
                     /codon_start=1
                     /product="protein BCCIP homolog"
                     /protein_id="XP_071687244.1"
                     /db_xref="GeneID:139840902"
                     /translation="MPRRPTRRGSLQKPQPGLSRLARLTALVTSARKGKKQNVKSTQH
                     KKVPHNPTCSKSEKRVMKEEKKESSSSSDIDNSSSDDDHSSSSDGVVQADFAFFDPKP
                     DDFHGVKVLLQSYLDDKEWDLSSFVDLILQQTTVGTVIKIEDDEDNCVYGFVSALNLQ
                     RYKDCKCMMEVEEFLLTICPDNEIKDKLKSHFGEESANVGLLISQRVVNLPPQLLPPL
                     YDGLFDEISWATEDEPTKELRKSFCFKYYIMVSKIYKRKNGDQKKKGSSSNEEAIIYL
                     KAEDEIFHNLSAWSFSFPLRTHQVTTNELKGYRAMGLVMAVEATSVSNFRQQLRSLIE
                     D"
     misc_feature    409..990
                     /gene="LOC139840902"
                     /note="Region: BCCIP; pfam13862"
                     /db_xref="CDD:464002"
ORIGIN      
        1 aaattctttc actgcccacc ctcgtcggta attgtaattt cagctgccct gccgcccgcc
       61 gcccatcgcc gccaccagtg aattgtcccg tctcgttagc cacaaataac tccgcttttg
      121 taggttatct ctaaattcat aatgccacga agaccaacta gaagaggctc tttacagaag
      181 ccgcaaccag gtttgtctcg tttagcccgt ttgacggcct tagttacctc cgctcgcaag
      241 ggaaaaaagc agaatgtcaa atcaacacaa cataaaaaag ttccccacaa ccctacatgt
      301 agcaaaagcg aaaagcgtgt tatgaaagaa gagaaaaaag agtcttcatc gtcttctgac
      361 attgacaatt catcttctga cgatgaccat tcatcttcct ctgatggagt tgttcaagca
      421 gattttgctt tctttgatcc aaagcctgat gatttccatg gagtgaaggt tttattgcag
      481 agctaccttg atgataaaga atgggatctg agcagttttg tagacttgat tttgcagcaa
      541 acgactgtgg gaactgttat taagattgaa gatgatgaag ataattgtgt ttacggcttt
      601 gtttctgctt tgaatttgca aagatataag gactgtaaat gcatgatgga agtggaagag
      661 ttcctattaa caatttgtcc agataatgaa ataaaagata aattgaaatc acattttgga
      721 gaggaatccg caaatgtggg tcttttgatc tcgcaacgtg tcgtgaatct gccacctcag
      781 cttctacctc ccttgtatga tggtttgttt gatgaaatct cctgggctac agaagacgag
      841 ccaacaaagg agctgaggaa gtcattctgc tttaaatatt atatcatggt cagcaaaatt
      901 tacaagcgta agaacggaga ccagaaaaag aagggtagca gctctaatga agaagctatt
      961 atttacttaa aggcagaaga tgaaatattt cataatctca gtgcatggtc ctttagcttt
     1021 cctttgcgca cacaccaggt caccaccaat gagctaaaag ggtatcgtgc aatgggttta
     1081 gtcatggccg ttgaagcgac cagtgtctca aatttccgac agcagttgcg ttcattaatt
     1141 gaagattaga gtcagagagt ttcctataaa tgtcacaaaa atctgatgat ggttattcgc
     1201 cctgctttac ttgcttgagt aagtcatata gtatagggcg catgcgtgaa ttttgttttc
     1261 ctgatcattt tgttggacct gaaatacata attatgattt ataaccttaa tttgtggttg
     1321 acatcgtaca ccgacagcat agctgttgat atttctctga ttagaggtgg ccaattgaga
     1381 taagttcgct cggtgggtag tgtattaggt caaagtgggc agtatgagtt gaaataggct
     1441 tgggtagaaa caggctacat tagtagtaat ga
//
LOCUS       XM_071831144            1050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840903), mRNA.
ACCESSION   XM_071831144
VERSION     XM_071831144.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1050
                     /gene="LOC139840903"
                     /note="uncharacterized LOC139840903; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840903"
     CDS             1..1050
                     /gene="LOC139840903"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687245.1"
                     /db_xref="GeneID:139840903"
                     /translation="MTIYETSDLVKLNQTFKNKEDFLMQLRTKCVTEGFQIKPKYSNK
                     SRCIQDSNNFQVRKLNDLHTCSNTQILPNNKHATKKVLGNILKETCSFVNYARPVIIV
                     DGAHLKSRYLGTNLIAVAMDANNGILPLAYGIGAGETTDHWTWFFGNLRDSLQSSGCC
                     IVNLTIISDRAPAIAAGISNVFPEVFHALCARHLLGNLKSVSKRVKSYEWHYWKMCKA
                     YRKSDFDHHYGILARRIPDSARTFTTVGFNRWSRHHADRVRYAYLTSNSAESMNALSV
                     HVRKLPITMLLEFFRASVQQWFWEHRNTADGLTTSVTPYAERKLGKRNRKSISWTVKP
                     ISQVKFEVLDMKKRR"
     misc_feature    295..591
                     /gene="LOC139840903"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgacaatat atgaaacctc agatctagtt aaattgaatc agactttcaa aaacaaggaa
       61 gattttctta tgcaattacg tacaaagtgt gttactgaag ggttccagat aaaaccaaag
      121 tactcaaaca agtcaaggtg tatacaagat agcaacaact ttcaagtacg gaagttgaat
      181 gatctacaca cgtgctcaaa tacccaaatt cttccgaaca ataagcatgc caccaagaag
      241 gtcctaggta atatactgaa agagacatgt tcgtttgtta actatgcacg accagtaatc
      301 atagtcgatg gggctcattt aaaaagtcgt tacttgggga ctaacttgat tgctgtcgct
      361 atggatgcta acaatggaat ccttccatta gcctacggta ttggagcagg agagaccacc
      421 gatcattgga catggttttt tggtaatcta agagactctc tacagtcttc ggggtgttgt
      481 attgttaatc ttaccattat atctgacagg gcacctgcaa tagctgctgg catatcaaac
      541 gtatttcccg aagtatttca tgcactatgt gctagacatt tgttgggaaa cctcaaaagt
      601 gtgtctaaaa gggttaaaag ttacgagtgg cactactgga aaatgtgcaa agcgtataga
      661 aaatctgatt ttgatcacca ctatggtata ctagcacgac gtatcccaga cagtgcacgt
      721 acattcacta ctgttgggtt caacagatgg tctagacatc atgcagatcg tgttcggtat
      781 gcttacctaa cttctaatag tgcagagtca atgaacgcac tgtcagttca tgtgaggaaa
      841 ctcccgatta caatgcttct tgaattcttt agagcttcag ttcaacaatg gttttgggaa
      901 caccgaaaca ctgccgatgg tttaacaacc tctgtcacac catatgcaga gcgtaagctt
      961 ggtaaaagaa atcgtaagtc tattagttgg actgtcaaac cgatatcaca agttaagttt
     1021 gaggtattgg atatgaaaaa aaggcggtaa
//
LOCUS       XM_071831145             827 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840904), mRNA.
ACCESSION   XM_071831145
VERSION     XM_071831145.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..827
                     /gene="LOC139840904"
                     /note="uncharacterized LOC139840904; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840904"
     CDS             81..827
                     /gene="LOC139840904"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687246.1"
                     /db_xref="GeneID:139840904"
                     /translation="MLEKSKALINSTVASSSKLTTQLNPSKCNNTNSHESTGDSQLHF
                     WPPSTAVVDGLVLKFKAKVGDTESNWEKIILNFKKELDAEEEKQLKAPSSSDVDTIAA
                     AGSGDKSRAIFSVPLSRREMEKDFEDMGERRLPRKPKKRPKSVQNQLDTLFPGLWLTE
                     IHADLYRVSETKKVAIVCPITSELMHLGWIQTYGIKDVNVFTCLAKMKKDMIKKFKTR
                     LREYGEESFVGCAMEEKDERDGSGLDLDVV"
     misc_feature    429..578
                     /gene="LOC139840904"
                     /note="Protein of unknown function (DUF1639); Region:
                     DUF1639; pfam07797"
                     /db_xref="CDD:400240"
ORIGIN      
        1 gtggaaaacc tagctggaaa aatctggcac aaaattcaca attcaattca attcaattga
       61 cgctaacaat aacaataaca atgctcgaga aatcaaaagc actaatcaat tccaccgttg
      121 cttcatcttc aaaactcaca actcaattaa atccatcaaa atgcaataac acgaattcgc
      181 atgaatccac tggcgattca caattacact tctggccacc atctaccgct gttgttgacg
      241 gtctagtact taaattcaag gctaaagttg gagatactga atcaaattgg gagaaaataa
      301 tactaaattt taaaaaagag cttgatgcag aggaagaaaa acaattaaaa gctccgtcat
      361 cttccgatgt agatactatc gccgctgccg gttccggaga caaaagtagg gcaatatttt
      421 ccgttccgct ttcacggcga gaaatggaga aggatttcga agatatggga gaacggcgac
      481 tgcctcgtaa acctaaaaaa cgacctaaaa gtgttcagaa tcaattggat actctgtttc
      541 ctggtctgtg gttgacggag atacatgctg atctatatag agtatccgag accaagaagg
      601 tagctattgt atgcccaatc acgtctgagt taatgcattt gggttggata cagacatatg
      661 gaattaagga tgttaatgtg ttcacttgtt tggcaaaaat gaaaaaagat atgatcaaaa
      721 aattcaaaac tcggttacgt gaatatggtg aggaaagctt cgttggttgt gctatggagg
      781 agaaagatga gcgtgatggg tccgggttag atttggatgt cgtgtga
//
LOCUS       XM_071831146            2117 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides very-long-chain aldehyde
            decarbonylase CER3-like (LOC139840905), mRNA.
ACCESSION   XM_071831146
VERSION     XM_071831146.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2117
                     /gene="LOC139840905"
                     /note="very-long-chain aldehyde decarbonylase CER3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 Proteins"
                     /db_xref="GeneID:139840905"
     CDS             97..2025
                     /gene="LOC139840905"
                     /codon_start=1
                     /product="very-long-chain aldehyde decarbonylase
                     CER3-like"
                     /protein_id="XP_071687247.1"
                     /db_xref="GeneID:139840905"
                     /translation="MDTQKENIDEICLENVKVCSSGKMGAPLFGWPWENLGSYKYLLF
                     GPLVVELIYSSVYEKRRMEYSWRFHILLLSSLRGLVHQLWSSFDNMLFLNRNTRLSNK
                     GVDFDQIDKEWHWDNFIILQAIVASIILLINPTMTNLPIWKATGIIFCMIFHIGLSEP
                     LYYWLHRFLHTSYFFQHYHWLHHNSKVNHPYTAGHATFLEHLLLYVIIGVPIVGTTLL
                     GHGSIVTFYGYILAFDFLRCMGHTNVEVVPHHIFDTMPILKYIIYTPTYHLIHHKDMK
                     TNFCLFLPLFDVLGKTMNESSWDLHKEILRKKAKAPEFVFLAHGVDIMSSMHVPFVFR
                     SLSSLPFATELIMFPMWPFSLLVVLIMWAKSKPFLLTFCHLRGRLLQSWIVPRFGFMY
                     FLPFAKDGINNQIEEAILVADKIGVKVLSLAALNKNEALNGGGKLFVMKLPDLNVRVV
                     HGNTLTAAVILNEIHKDVKEVFLTGATSKLGRAIAIYLARRKVRVLMLTKSKERFSSI
                     QKEVPLENQNLLVQVTKYQAAKLCKTWILGKWTTPNAQKWAPPGTHFHQFVVPPVFEF
                     RTDCTYSKLAAMKLPDDVQGLGACEYTMERGVVHACHAGGIVHLLEGWKHHEVGPINV
                     DRIDLVWEAALRHGFKPV"
     misc_feature    187..2022
                     /gene="LOC139840905"
                     /note="fatty aldehyde decarbonylase; Region: PLN02869"
                     /db_xref="CDD:166510"
ORIGIN      
        1 cctcttcatt acatgattga tacctttaac tgctatattc ctcatttgtt ctccaagaac
       61 accaacaagt atttgaaggc ttttagagag aaataaatgg atactcaaaa agaaaatatt
      121 gatgaaatat gtttggaaaa tgtaaaagtt tgttcatcag ggaaaatggg agctccattg
      181 tttggttggc catgggagaa cttaggcagt tacaaatact tgttgtttgg gccacttgtg
      241 gttgagttga tatattcaag tgtttacgag aaaaggcgaa tggagtatag ttggcgtttt
      301 catattctac tcttgtcgtc gctaagagga cttgtgcatc aattatggag ttcgttcgat
      361 aacatgcttt ttcttaatcg aaatactcga ttatctaaca aaggagttga ttttgatcaa
      421 attgacaaag aatggcattg ggacaatttc atcatacttc aagcaattgt agcttcaata
      481 atcttattga tcaaccctac aatgaccaat cttcctattt ggaaagcaac agggattatt
      541 ttttgcatga ttttccatat tgggctatcg gaacctttat attattggct ccatagattc
      601 ttacatacat catatttctt ccaacattat cactggctac atcataattc taaagtgaac
      661 catccatata cagctggaca tgcaacattc ttggagcatt tattacttta tgtaataata
      721 ggagttccaa ttgttgggac tacattgctt ggacatggtt cgatcgtcac gttctacgga
      781 tatattttgg cattcgattt cctaagatgt atggggcaca ctaatgtgga ggttgtccct
      841 catcacattt tcgataccat gccaattctc aaatatatca tttatacgcc tacgtaccat
      901 ttaatacacc ataaagacat gaagactaat ttctgcctct ttctgccact ttttgatgtt
      961 ttggggaaga ccatgaatga aagttcttgg gatcttcata aagaaatact ccgcaagaaa
     1021 gctaaagcac cagaatttgt gtttttagca catggagttg atattatgtc atcaatgcat
     1081 gttccatttg tttttagatc attaagctca ttaccctttg ccacagaact tatcatgttc
     1141 ccaatgtggc ctttttcttt attggtggtt ttgatcatgt gggctaaatc taagcctttc
     1201 ttactcacat tttgccatct aagaggaaga ctacttcaaa gttggattgt acctagattt
     1261 ggtttcatgt attttttacc atttgcgaaa gacgggataa ataatcaaat tgaagaagct
     1321 atactagtgg ctgataagat aggtgtcaag gtccttagtc tcgctgcctt gaacaagaac
     1381 gaagctttga atggaggtgg gaaactattt gtgatgaaac ttccggatct taatgttcgt
     1441 gtagttcacg gaaacacatt gactgcagcc gttattctta acgagattca taaagatgta
     1501 aaagaggtgt tcctaacggg agctacttcg aagcttggaa gagccattgc catttactta
     1561 gctcgtcgca aagttagagt cttgatgctt actaaatcca aagaacgatt ttcgagcata
     1621 caaaaagaag ttccacttga aaatcaaaat ttactggttc aagtgaccaa atatcaagca
     1681 gctaaacttt gcaagacgtg gattctaggc aaatggacta caccaaatgc gcaaaaatgg
     1741 gcaccaccag gaactcattt ccatcagttt gtggttccac cagtatttga gttccgaact
     1801 gattgcacgt atagtaagct agcagccatg aagcttcctg atgatgtcca agggttagga
     1861 gcatgcgagt atacaatgga aaggggggtg gttcatgctt gtcacgcggg tggaatcgtt
     1921 catcttcttg aaggttggaa acatcatgaa gttggcccga tcaacgttga tcggattgat
     1981 ttggtttggg aggctgctct aaggcatggg ttcaagccgg tttaaatgtt tctccatttg
     2041 gaaacgttta tgttctcata ggacagtatg acacttcaac aaaggatttc aagttaacct
     2101 caatggagta gtgtaac
//
LOCUS       XM_071831147             810 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840906), mRNA.
ACCESSION   XM_071831147
VERSION     XM_071831147.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..810
                     /gene="LOC139840906"
                     /note="uncharacterized LOC139840906; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139840906"
     CDS             1..810
                     /gene="LOC139840906"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687248.1"
                     /db_xref="GeneID:139840906"
                     /translation="MLREYEIGSDMEDKDDPTLVLNGNDNDRVEKEEINNVRLLLLLT
                     FFTKTGNLIERSQKKRKMKLQNFCLCITDLYEREYLRKPTTHDIQRLYAPHEAKHGFR
                     GILGSIDCRHWEWKTCVVAWQGQFTNGHKKLSLILEVNDTPPPATFTVNSREYTYSYY
                     LTDGTYPDWATLIKAFSSPTDEPYTDVTQKMSRILYACVLLHNMIQEDNGFAITSLDE
                     EYLRDPDNQPAFVRNQNSDHATRAREIRDRDVHNQLRTDLIEDIWNLPPNF"
     misc_feature    232..630
                     /gene="LOC139840906"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgttacgtg aatacgagat tggttccgat atggaggata aagatgatcc cacgttagtt
       61 ttgaatggaa atgataatga ccgtgtggag aaggaagaaa tcaacaatgt gaggttgctg
      121 cttctactga cgttcttcac aaaaaccgga aacttaatag aaagaagtca aaagaaaaga
      181 aaaatgaagc ttcaaaactt ttgtttgtgt attactgact tgtatgaaag agagtatcta
      241 cgaaaaccaa caacacacga tattcagcga ttatacgcac cgcacgaagc aaaacatggt
      301 tttagaggga tacttggaag catcgattgc aggcactggg aatggaagac ttgtgttgtt
      361 gcatggcaag gtcaattcac aaatggtcat aaaaaactgt ctcttatact cgaagttaac
      421 gatacacctc cacctgcaac atttaccgta aatagtcgtg agtacacata cagttattat
      481 ctcactgacg gtacttaccc agattgggct acacttatta aggcattttc atccccaact
      541 gatgagcctt acacggatgt tacacaaaaa atgtctcgca tcttatacgc ttgtgtacta
      601 ttgcacaata tgatccaaga ggataacggt tttgctataa cttcactcga cgaagagtat
      661 ctaagagatc cagataacca acctgctttt gttaggaatc aaaatagtga tcatgcaaca
      721 cgagctaggg aaatacgcga cagagatgtg cataatcaac ttcggacaga cttaatcgag
      781 gatatatgga atcttccacc aaatttctga
//
LOCUS       XM_071831148            1416 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840907), mRNA.
ACCESSION   XM_071831148
VERSION     XM_071831148.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1416
                     /gene="LOC139840907"
                     /note="uncharacterized LOC139840907; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840907"
     CDS             1..1416
                     /gene="LOC139840907"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687249.1"
                     /db_xref="GeneID:139840907"
                     /translation="MNQLDYQNLLYLHPSEGPGSLAVQEKLTGAQNYRSWRRSIEIAL
                     STKRKSGFITGTVTRPVDDEVRAEQWDTCNDMVISWLMSSVSDPIAKSIMFIGTSVEI
                     WRQLEKHFALSNGSRKYKLHRETYSMEQQGIVINEYYTKMKCIWEELDSMNQLPRVTN
                     LTPEIRAFLAAYNQQKEEQHLFQFLNGLDEQFSSLRSQLLLMTPLPSVESACSMLQQE
                     ESQREMFSSFETTALYSKNSQPAKTVQPVQSGQPDKCATCGHKWHSPDKCWERIGYPV
                     WHYKYKQQERAKQASFGKVKPGQGKRTAANVQGGNIVFTTEQFEQLLKCLPPLAQKDT
                     QSNDDSDNEIDHHFAAGISSTNLSKLNVWILDTGATDHITPMSKCLSNSKSLFWKPKI
                     KLPNVDSSVISHIGTVKLDNGMGLKDVLVVPDFKFSLLSVPKLTKDKSCDVIFFSQFC
                     VIQDLVTKKVMGLGKRRNDLY"
     misc_feature    37..180
                     /gene="LOC139840907"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    235..666
                     /gene="LOC139840907"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgaatcaac tcgattacca gaatctgttg tacttgcatc catcggaagg tccaggttca
       61 cttgctgttc aggagaagct aacaggagca cagaactatc gctcatggag aagatccata
      121 gaaattgcat tgtctactaa gagaaagtca ggttttatca ctggaactgt tactcgacct
      181 gttgatgatg aagttcgtgc tgaacaatgg gacacctgta acgatatggt gataagctgg
      241 ctcatgagct ctgtgtctga tcctattgct aaatctatca tgttcattgg aacatctgtt
      301 gagatctgga gacagcttga aaaacacttt gctctaagca atggatctag gaagtataag
      361 cttcatagag agacctattc tatggaacaa caaggtatag tgattaatga gtattataca
      421 aaaatgaagt gtatttggga agagttagac tctatgaatc aattgcctag ggttactaac
      481 ttgacacctg agataagggc ttttcttgct gcttacaatc agcaaaagga agagcagcat
      541 ttatttcagt tcttgaatgg tctagatgaa caatttagtt cattaaggag tcaattactg
      601 ctaatgactc ctttgcctag tgttgaaagt gcttgttcca tgctgcaaca agaggaatca
      661 caacgtgaga tgttttcaag ctttgaaacc actgcacttt atagtaagaa tagtcagcct
      721 gctaagactg ttcaacctgt tcaatctggt caaccagata aatgtgcaac ttgtggacat
      781 aaatggcatt ctccagataa gtgttgggaa agaattggtt atcctgtgtg gcattataag
      841 tataagcaac aagaaagggc aaaacaagca agttttggta aagttaaacc tggtcaaggc
      901 aaaaggactg cagctaatgt tcaagggggt aacattgtgt ttactacaga gcaatttgag
      961 cagttactaa aatgtcttcc acctttggca caaaaggata ctcaaagcaa tgatgattct
     1021 gataatgaaa ttgatcatca ctttgctgca ggtatatcct ctactaattt gtcaaaattg
     1081 aatgtgtgga tacttgatac tggtgctact gatcacatta caccaatgtc aaaatgtctt
     1141 agtaattcta aatctttgtt ctggaaacca aagattaaat taccaaatgt agattcatct
     1201 gttatatctc acataggaac tgttaagctt gataatggaa tgggattaaa agatgtattg
     1261 gtggtacctg atttcaaatt tagtctgcta tctgtaccaa agttgactaa ggacaaatct
     1321 tgtgatgtta ttttcttttc acaattttgt gtcattcagg acttggtgac aaagaaggtc
     1381 atgggattgg gtaaaagaag gaatgatctc tactaa
//
LOCUS       XM_071831149             681 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840908), mRNA.
ACCESSION   XM_071831149
VERSION     XM_071831149.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..681
                     /gene="LOC139840908"
                     /note="uncharacterized LOC139840908; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840908"
     CDS             1..681
                     /gene="LOC139840908"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687250.1"
                     /db_xref="GeneID:139840908"
                     /translation="MDFLALSIDLLFDSTSSEEEEEIQPRTRFQRQPRRFLNRDREAA
                     GQLLWNDYFCENPTFPDDIFKRRFRMRKVLFLRIKDGILQHSYTPNAPDHFTFFQQRP
                     DALGRLGFSTIQKITCASRQLSYGMTADIFDEYIKMAEKTGYVTLNNFCKCIIDLYGR
                     KYLRKPNATDLARLYSAHEEKHGFKGMLGSIDCMHWAWKNCPVAWKSQYTRGDHGHPT
                     IMLEAVAS"
     misc_feature    481..>678
                     /gene="LOC139840908"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggattttt tagccttaag tatcgatttg ttattcgatt caacgtcgtc cgaagaagag
       61 gaagaaattc aaccaagaac tcgttttcaa agacaaccac gacgtttttt aaatagagat
      121 cgtgaagcag cgggtcaatt attgtggaac gattactttt gtgaaaatcc gacgtttcca
      181 gacgacattt tcaagagacg atttcggatg cgtaaagttt tatttctccg tatcaaagac
      241 ggtattcttc aacactctta tactcctaat gcccccgatc attttacttt tttccaacaa
      301 cgtccggatg cacttggacg tcttggtttc tcaactattc aaaaaataac ttgcgcgtca
      361 cggcaattgt cgtatgggat gaccgcggat atatttgatg aatatattaa aatggcggaa
      421 aaaacgggtt atgttacttt aaataatttt tgcaagtgta taattgactt atatgggagg
      481 aaatatttga ggaaacctaa tgcaactgac cttgctcggt tgtactcggc gcacgaggag
      541 aaacatggtt ttaagggaat gttgggtagt attgactgta tgcattgggc atggaaaaat
      601 tgtcccgttg catggaaaag tcaatatacg agaggtgatc acggtcaccc gacgatcatg
      661 cttgaagcgg ttgcttcata a
//
LOCUS       XM_071831150             600 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840909), mRNA.
ACCESSION   XM_071831150
VERSION     XM_071831150.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..600
                     /gene="LOC139840909"
                     /note="uncharacterized LOC139840909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840909"
     CDS             1..600
                     /gene="LOC139840909"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687251.1"
                     /db_xref="GeneID:139840909"
                     /translation="MWIWHAFFGMAGSNNDINVLNHSPLFDSLRKDRAAPSPFEVNGN
                     QYPFCYYLADGIYPDWTTLIKGYTTPIEEPRKKFTKFQASARKDVERTFGVLQGRFAI
                     LKTPARVMSVNKMRRIMYSCIVMHNMIQEDNGFALSTWEQEWLDKPENRPRRNIRRRV
                     KDRRSREKEIRDRDVHDQLREDLTAHIWNLPPNFRSMHN"
     misc_feature    <1..402
                     /gene="LOC139840909"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtggatat ggcatgcgtt ttttgggatg gcgggttcaa acaatgacat taatgtgtta
       61 aatcattctc cgttgtttga ttcccttcgt aaggatagag ccgcaccttc accgtttgaa
      121 gtaaacggaa accagtatcc cttttgttac tacttggcgg acgggatata tcccgattgg
      181 acaacactaa taaaagggta tacgactcct attgaagagc ctagaaaaaa atttactaaa
      241 tttcaagcga gtgctagaaa ggatgttgag cgtacatttg gtgttttaca aggtcggttt
      301 gcgattttaa aaacaccggc acgagttatg agtgttaata agatgagaag gataatgtat
      361 agttgtattg ttatgcacaa catgatacaa gaagataacg ggtttgcgtt aagtacttgg
      421 gaacaagaat ggttagataa acccgaaaac cggcctcgtc gcaatattcg gagaagggtc
      481 aaagatcgtc gatcacgaga gaaagagatt cgcgatcgag acgtgcacga tcaacttcgt
      541 gaagatttaa cggctcatat ttggaacctc ccgccaaact ttcgatcgat gcataactag
//
LOCUS       XM_071831151             765 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840910), mRNA.
ACCESSION   XM_071831151
VERSION     XM_071831151.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..765
                     /gene="LOC139840910"
                     /note="uncharacterized LOC139840910; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840910"
     CDS             1..765
                     /gene="LOC139840910"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687252.1"
                     /db_xref="GeneID:139840910"
                     /translation="MAVDVCSTSEDPICPRISFSHELDDPSSDSLDPTRSDRFQLSPS
                     FDFSFCTTSSPTPADELFSNGQILPTQIKTPQNIQILDPITNLSKSPNSIARKKRLKE
                     FIFRKDQEQEHEQEKSASKSFWQFTRSVSLNCDSNKGTKGLLRSLSIKSLSRSHSTGS
                     ALNPKRDPVSKVVEKSKESMFLRRCTSLNQPPPSSTHVYYSYRNSNNSKSSRGGITII
                     PILNVPPAYNISKGTINFFGFGSLFCNGKVKRKTKL"
ORIGIN      
        1 atggctgttg atgtttgctc aacttctgaa gatcccatat gcccaagaat ctcattctct
       61 catgaactcg atgacccatc atctgattca cttgacccga cccgatcaga ccgattccaa
      121 ttatcaccat cttttgattt ctctttttgc accacttcta gtccaacacc agctgatgaa
      181 ctcttttcaa atggccaaat cctccctacc caaatcaaga ccccacaaaa tattcaaatc
      241 ctcgatccaa taacgaactt atcaaaaagc ccgaattcga tagcccgcaa gaaaaggctc
      301 aaagagttca tatttcgtaa agatcaagaa caagaacatg aacaagagaa gagtgcatca
      361 aaatcatttt ggcaatttac acgaagtgtg agtcttaatt gtgacagtaa taaagggaca
      421 aaagggttgc ttagatcatt atcaattaaa agtttatcac gaagtcattc aaccgggtca
      481 gctttgaacc cgaagagaga tccggtctca aaagtggtgg agaagtcaaa ggagtcgatg
      541 tttttaagaa gatgtacgag tttaaatcaa ccaccaccat cttcgactca tgtttactat
      601 agttatcgga attctaataa ttcaaagagt agcagaggtg ggataacaat tattccaatt
      661 ctgaacgttc ctccggctta taatatttca aaggggacta taaatttttt cggatttggt
      721 tcactttttt gtaatgggaa agttaaaagg aaaacaaaat tatag
//
LOCUS       XM_071831152             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840911), mRNA.
ACCESSION   XM_071831152
VERSION     XM_071831152.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139840911"
                     /note="uncharacterized LOC139840911; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840911"
     CDS             1..750
                     /gene="LOC139840911"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687253.1"
                     /db_xref="GeneID:139840911"
                     /translation="MLLLSLNIRTFGSSNDSKIREFKRLIRKIKPSFIALQETKLHRV
                     NEFWVRGIWGSNYCQILQKEMVGKSGGQLIIWDSTLFIATDSYICDHFIGVRGKWASN
                     GAPCIFINVYGPHNDPDKIRMWDSLSAFIKKYEDEACVVCGDFNEVRNQDERLNCDFN
                     ASRARKFNDFITGNNLIDLPMGGRKFTRVSDDGLKFSKLDRFLINDHFNLMWSILSVI
                     ALERSLSDHCPIILKDIEKNFGPKPTRVFDE"
     misc_feature    7..699
                     /gene="LOC139840911"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,112..114,334..336,430..432,436..438,598..600,
                     676..681)
                     /gene="LOC139840911"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(112..114,676..678)
                     /gene="LOC139840911"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(334..336,436..438,679..681)
                     /gene="LOC139840911"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgttactgc tatcactaaa cataagaact tttgggtctt caaatgatag taaaatcagg
       61 gaattcaaga ggctaattcg taagattaaa ccgtctttca ttgcgttaca agaaacaaaa
      121 ttacatcggg ttaatgaatt ttgggttcgt gggatatggg ggtcaaacta ctgtcaaatt
      181 ttacaaaaag aaatggtggg taaatctggg ggtcaactta tcatttggga ttctactctc
      241 tttattgcca ctgattctta tatttgtgat cattttattg gtgtgcgagg taaatgggcc
      301 agcaatggtg ctccatgtat attcatcaat gtatatggac cccataatga cccggataag
      361 attcgtatgt gggactctct ttcagcgttt atcaaaaaat atgaagatga agcttgtgtt
      421 gtttgtggag attttaatga ggttcgcaat caagatgaaa gacttaactg tgattttaat
      481 gcaagcaggg ctagaaagtt taatgatttc ataacgggta acaatttgat tgatctacct
      541 atgggcggta ggaaatttac tcgggttagt gatgatggat tgaaatttag caaacttgac
      601 aggtttctca taaatgatca ttttaacctc atgtggagta tcctgtcggt cattgctctg
      661 gagaggagtc tgtccgacca ctgccctatt attctgaaag atattgagaa aaactttggt
      721 cctaaaccta ccagagtctt cgatgaatga
//
LOCUS       XM_071831153            1929 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamine--tRNA ligase-like
            (LOC139840914), mRNA.
ACCESSION   XM_071831153
VERSION     XM_071831153.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1929
                     /gene="LOC139840914"
                     /note="glutamine--tRNA ligase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840914"
     CDS             1..1929
                     /gene="LOC139840914"
                     /codon_start=1
                     /product="glutamine--tRNA ligase-like"
                     /protein_id="XP_071687254.1"
                     /db_xref="GeneID:139840914"
                     /translation="MASEEEFNPYSLFPSPEDNYKVHTEVSFSDGRVLRACNSEEQLE
                     KHLKATEGKVVTRFAPEPNGYLHIGHAKAMFVNFGLAKERSGDYFLRFDDTNPEAEKK
                     EYFDHIKEIVDWMGWKPCMITYTSDYYQELYDLAVELINRGHAYVDHQTGDEIKEYRE
                     KKMNSPWRDRPISESLKLFDDMKRGLIEEGEATLRMKQDTQSNNGNMYDLIAYRIKFT
                     THPRTGDKWCIYPSYDFSHCIVDSLENITHSLCTLEFETRRASYYWLLDALGLYQPYV
                     WEYSRLNITYNVMSKRKLNRLVIENYVDGWDDPRLMTLAGLRRRGVTSTAISTFLKEI
                     GITRSDGTMIQMERLEHHVREELNKTASRTMVVLHPLKVVITNLEPSSVIHLDAKKWP
                     NTPVDDASSYYKVPFTSVVYIEQTDFRLEDSKDYYGLAPGKTVILRYAFPIKCTEVVL
                     SEDKQSVVEIHAEYDPFKTRTTKPRVIHWVAEPSPGVDPPKVEVRLFEKLFLSENPGE
                     LENWVDDLNPKSKVIIPCAYAVPSLRNAEVDDKFQFERLGYFVADKDSTPEKLIFNRT
                     LTIKDGYAKPGTRTRISTSKSNEKKKGKSKKSAEGDSLTLPDLSSVDVEGKVSVTVEK
                     LGRFMDSVEEVVGYSGGK"
     misc_feature    <7..1731
                     /gene="LOC139840914"
                     /note="glutamine-tRNA ligase; Region: PLN02859"
                     /db_xref="CDD:178450"
ORIGIN      
        1 atggcatctg aagaagaatt caatccttat tcactattcc cttcaccaga ggataattat
       61 aaggtgcaca ctgaagttag tttcagtgat ggacgagttt tgcgagcttg caattcggaa
      121 gaacaactag aaaagcatct caaggcaact gaagggaaag ttgttacccg ttttgcacca
      181 gaacctaatg gttatcttca tattggtcat gccaaggcta tgtttgttaa ctttggcctt
      241 gcaaaagaga gaagtggtga ctacttcctg aggtttgacg atactaatcc tgaagccgag
      301 aaaaaagaat attttgatca tattaaagaa attgtggatt ggatggggtg gaagccttgt
      361 atgattactt atactagtga ttattatcaa gaactatatg atttagcagt ggagctcatt
      421 aacaggggtc atgcttatgt tgatcaccag actggggacg agataaaaga gtatagagag
      481 aaaaagatga acagtccatg gagggatcgg ccgatatcgg aatcacttaa actttttgat
      541 gatatgaaac gaggtttgat tgaggaagga gaagctacgc ttagaatgaa acaagatacg
      601 cagagtaaca atggtaatat gtatgacctc attgcatatc gaataaagtt tactactcat
      661 ccgcgtactg gagacaagtg gtgcatctac ccaagttatg atttttcaca ctgcattgtc
      721 gattctcttg aaaatatcac acattctctt tgcacacttg aatttgagac acggcgtgct
      781 tcatactact ggttgctgga tgcacttggc ctttaccagc cttatgtgtg ggaatattcg
      841 cgcttgaata tcacctacaa tgtcatgtca aaacgtaagt taaatcgcct tgtgattgag
      901 aattatgtgg acggatggga tgatcctcgc ttgatgacat tagcggggtt gcggcgcagg
      961 ggtgtcacgt cgacagcaat aagcactttt cttaaagaaa ttggtattac tagaagtgat
     1021 ggcaccatga tacaaatgga acgcctcgag catcacgtac gggaagaact aaataaaaca
     1081 gcttctcgca cgatggttgt gttacatcca cttaaggttg ttattaccaa tcttgagccc
     1141 agttcggtga tacaccttga tgcgaagaaa tggcctaata ccccggttga tgatgcgtca
     1201 tcttactaca aggttccatt tacaagtgtt gtttatatcg agcaaactga ctttagattg
     1261 gaagattcga aagattacta tgggcttgct cctgggaaaa ctgtcatact cagatatgca
     1321 tttcctatta agtgtactga agttgttctt tctgaagaca aacagagtgt tgttgaaatt
     1381 catgctgagt atgatccttt caagacacgt acaacgaaac caagggttat tcattgggtt
     1441 gcagaacctt ctcctggggt tgacccaccg aaggtggaag ttagactatt tgaaaaactg
     1501 tttctttctg agaatcctgg agaactcgaa aactgggttg atgatttaaa cccaaagtct
     1561 aaagtgataa tcccgtgtgc gtatgctgta ccgtcccttc gaaatgctga ggttgatgac
     1621 aaattccagt tcgaaaggct cggttatttt gtggctgata aggattcaac acccgagaag
     1681 ctcatcttta accggactct tactattaag gatggttatg caaagcctgg aactaggact
     1741 cgcatctcca cttctaaatc taatgagaag aagaagggca agtctaagaa gtcggcggaa
     1801 ggtgactctt tgactcttcc cgatttgtcg tcagttgatg ttgagggtaa ggttagtgta
     1861 actgtggaga agcttggtag gttcatggat agtgtcgaag aagttgtcgg ctactcgggt
     1921 ggaaagtga
//
LOCUS       XM_071831154             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            JAGGED-like (LOC139840915), mRNA.
ACCESSION   XM_071831154
VERSION     XM_071831154.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139840915"
                     /note="zinc finger protein JAGGED-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139840915"
     CDS             1..570
                     /gene="LOC139840915"
                     /codon_start=1
                     /product="zinc finger protein JAGGED-like"
                     /protein_id="XP_071687255.1"
                     /db_xref="GeneID:139840915"
                     /translation="MVFRRSPLDLNNLPDDHFFRDHNNQNKQPLDHDSSSAVSGIYRR
                     KKNGAKDEKGKVYECRFCSLKFGKSQALGGHMNRHRQERETETLNQARQLVFSANNLV
                     PQRPHHLGGQPSVHGSYHYPAAGFNMSPTNVYPSRLYSGNSTTIPPPPPATYSSQYPH
                     SLNDYFVNPQLGFQNLNCAAVPIPDNSFN"
     misc_feature    166..246
                     /gene="LOC139840915"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 atggttttca ggagaagccc actggacctc aacaatttac cagatgatca tttctttagg
       61 gaccataaca accaaaacaa acaaccactt gatcatgact catcttctgc tgtttcaggg
      121 atctacagaa gaaagaaaaa cggcgcaaaa gatgaaaagg ggaaggttta tgagtgtagg
      181 ttttgttctc tcaagtttgg caaatctcaa gctcttggag gacacatgaa ccgccatcgc
      241 caagaaaggg agacagaaac acttaaccaa gctcgtcaac tggttttcag tgctaataat
      301 ttggtacccc aacgccctca ccatttaggt ggacaaccaa gtgtgcatgg aagctatcat
      361 tatccagctg caggctttaa catgagtcct actaatgttt atccttcaag actttattcc
      421 ggcaattcaa ccaccatccc accaccacca cctgccacct attcatctca atatccacat
      481 tcactaaatg actactttgt taacccacaa ctcggctttc agaacttgaa ttgtgctgcc
      541 gtcccaatac ccgataattc tttcaactag
//
LOCUS       XM_071831156            1376 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840916), mRNA.
ACCESSION   XM_071831156
VERSION     XM_071831156.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 44% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1376
                     /gene="LOC139840916"
                     /note="uncharacterized LOC139840916; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840916"
     CDS             1..1362
                     /gene="LOC139840916"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687257.1"
                     /db_xref="GeneID:139840916"
                     /translation="MELIGTVCSQNVDAWEWVISDDGNFQKWEWTRDKIDTRDVSALA
                     SLAMELIGTVCSQNVDAWEWVISDDGNFQIEQNPPSHNIFAWRVKSDLLPSIINVSSR
                     RVELEDLSCAICGYNTKSISYVLFECSIAQDLWRAIRRWLDISIPSFNNWIEWEAWFD
                     AWNVNKDTKDMTWIRSRSKCNIRWISSRSKCNIIWNLWLAKPLRNNNPLDLNNFPDDN
                     FNNSRDHGKQTLDDSSSSASPGIYRKKKNGAKQDESGKVYECRFCSLKFCKSQALGGH
                     MNRHRQERETETLNRARQLVFSNDNLLPQLPHQLGGQSMVHGGFHHSTMGSAVYPTRL
                     FSGTSTTVLPPPPPQQTPPNMYTSSASRVNNNNHPYSSQYPINDYFVGHVCSTPNPPP
                     PPFSLQNITGTSVPPPLPESSTNYTCIGAPVGQSFTFAAGSNTGTIDMTPSLVNRYHQ
                     DGF"
     misc_feature    <232..402
                     /gene="LOC139840916"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
     misc_feature    769..849
                     /gene="LOC139840916"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 atggaactga ttggtactgt ttgtagccaa aatgtcgatg catgggaatg ggttattagc
       61 gacgacggta actttcagaa atgggaatgg actcgtgata aaattgacac tagagacgtt
      121 agtgctttag cgtctttagc catggaactg attggtactg tttgtagcca aaatgtcgat
      181 gcatgggaat gggttattag cgacgacggt aactttcaga tagagcaaaa tcctccctcg
      241 cacaacatat ttgcttggag agtgaaatcg gatctattgc cgtctataat taatgtctca
      301 tctagaaggg tggagctaga agatttgagt tgtgccatat gcggttataa tacaaaatct
      361 attagttacg ttcttttcga gtgctccatt gcgcaagatc tatggagagc tatacgtaga
      421 tggctggata tttcgatacc atcattcaac aattggatcg agtgggaagc ttggttcgac
      481 gcttggaacg tgaataagga tacgaaagac atgacgtgga ttcgtagcag aagcaaatgt
      541 aatattaggt ggattagtag cagaagcaaa tgtaatatta tttggaattt gtggcttgca
      601 aagcctttga gaaacaacaa cccacttgac ctcaacaatt ttccagatga taattttaac
      661 aacagtagag atcatggcaa acaaacactt gatgactctt cttcttcagc ttctccagga
      721 atctatagga aaaagaaaaa cggcgcaaag caggatgaaa gtgggaaggt gtatgagtgt
      781 aggttttgtt cccttaaatt ttgcaagtca caagctcttg ggggacacat gaatcgccat
      841 cgccaagaaa gggagacgga gacactaaat cgagctcgtc agttggtttt tagcaacgat
      901 aaccttctac cgcaactccc tcaccaacta ggtggacaat caatggtaca tggaggattt
      961 catcattcaa caatgggaag tgcagtttat cccacaagac tcttctccgg tacttcgaca
     1021 accgttttac caccaccacc accgcaacaa acgccgccaa atatgtacac ttcatcggca
     1081 tcacgagtta acaacaacaa ccacccttac tcatcacaat atccgataaa cgactacttt
     1141 gtaggacatg tttgttccac ccccaatcca ccaccaccac cttttagcct acaaaatata
     1201 accggaacaa gcgtcccacc accactacca gaaagtagta ctaattacac atgcattggt
     1261 gcacctgttg gacaaagttt cacatttgct gcaggaagta atactggtac tatagacatg
     1321 acaccatctc tagtcaatcg atatcatcaa gatggcttct agtcaattag ttaatt
//
LOCUS       XM_071831157             417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840918), mRNA.
ACCESSION   XM_071831157
VERSION     XM_071831157.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139840918"
                     /note="uncharacterized LOC139840918; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840918"
     CDS             1..417
                     /gene="LOC139840918"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687258.1"
                     /db_xref="GeneID:139840918"
                     /translation="MVDLTGRSSSLSQYSIFIMANKYGKIYTVTSISHLIPVRLYLTK
                     LNYAHWKTLFTTHCSGFDVLMFILGTSTVEEKETPEWIKADAVVLTWIFNTISESLLE
                     RVLNSEPSSSNAAWTFLEKLFKENKLSKTMELNAEL"
ORIGIN      
        1 atggtcgatc tcactggtcg atcttcttct ctatcccaat attcaatctt catcatggcc
       61 aacaaatatg gtaagatcta caccgtaaca tccatctcac accttattcc ggttagacta
      121 tatcttacaa aattaaacta tgctcattgg aaaacccttt ttacaacaca ctgttcaggg
      181 ttcgatgtcc ttatgttcat ccttggtacc tctactgtcg aagaaaaaga aactccagaa
      241 tggattaaag ctgatgcagt tgttctcacc tggatattca acaccatatc cgaatcgttg
      301 cttgaacgag tccttaattc tgaaccatct tcatcaaatg cagcctggac ttttcttgag
      361 aagcttttca aggaaaacaa actctcaaaa acgatggaac taaatgcaga actatga
//
LOCUS       XM_071831158            2115 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840919), mRNA.
ACCESSION   XM_071831158
VERSION     XM_071831158.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2115
                     /gene="LOC139840919"
                     /note="uncharacterized LOC139840919; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840919"
     CDS             1..2115
                     /gene="LOC139840919"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687259.1"
                     /db_xref="GeneID:139840919"
                     /translation="MIKVAIGGKSKNLLNHLVSNSPEKDDSKFEQWEQEDLIVFSWLI
                     QNIEPSIASNLTEFATAKLLWDALVTTYSSGKDKLQNFDLHVKANDIKQKDKSLEDLW
                     ITLQGIWGEIDRRDLNPMKCSTDIVMYNQIRAEQKLFQFLNARNKQYDQTKRELLRWD
                     PLPSTEEAYAAVRKEMAHQQILSGIDITPNQGRIGSGLATTEGVGPNTRDHRSSRGPP
                     PRTTYGSASSHIDKSKLVCTKCGKQRHTREQCFEIKGYPEWWTKPGKVAAATAEPPPA
                     TTDREPNLGFGGVAATTNEQGMFLRPFSSPFQNCSSNKIRDKLNLGNRERIHEINLGI
                     HMNLKNGRDKHAYIGNTKEVTCTDQSQTRIESKETVGLDGHKSHSGPVSGLDIRNKFI
                     EKDRPDRSKKISLGNSRHYIGPVKKDRQKEKYKTCLEKSKLIIPCQNSFSALSKKQDD
                     EMSRSEANIVSENFKTNSWILDCGATDTMTFDKNDIVFKTKPKRNKIQTANGELINVK
                     GGGTIEISPTIKLPNCLYIPALSHKLLSVSHVTKELNCKVLMYPTFCILQDIRTGTVI
                     GRGTEKKGLYYIDEFSQRGTVLLAHGTPTREAWLWHRRLGHPSVGYLRFLFPSLFPSN
                     VNLCCETCILAKSHRSTFKPSNIRKNVPFALIHSDVWGPAPINGGKNFRYFVTFIDDC
                     TRMTWIYFLTHKSDVYEKLSLL"
     misc_feature    1720..1911
                     /gene="LOC139840919"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1954..>2088
                     /gene="LOC139840919"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgatcaagg tggctatagg aggaaagtct aaaaacctcc taaaccacct cgtatcaaac
       61 tcacctgaaa aagacgattc aaaattcgaa caatgggagc aagaagacct cattgttttt
      121 tcatggctaa tccaaaatat agagccaagt attgcaagca acttaaccga atttgctacg
      181 gctaagttgt tgtgggatgc tcttgtaacc acatatagca gtggtaaaga caaactccag
      241 aattttgact tacatgttaa ggctaacgac atcaagcaaa aagataagtc acttgaggat
      301 ctatggatca cattacaagg aatctggggc gagatcgata gaagagacct gaatcccatg
      361 aagtgttcca cagatatcgt aatgtacaat caaattagag ctgaacaaaa attgtttcaa
      421 tttcttaatg ctcgtaacaa acaatacgat cagaccaaac gtgagttact ccggtgggat
      481 cctctaccat ctacagagga ggcttatgcg gctgtacgaa aggagatggc tcaccaacag
      541 attctgagtg gcatcgacat cacaccaaat caaggtagaa tcggaagtgg attagccaca
      601 acagaagggg ttgggccgaa cacaagagac caccgcagta gccgtggacc accaccaaga
      661 accacctatg ggtcagcatc atctcatatt gataaatcga aattagtttg caccaagtgt
      721 ggaaaacaaa ggcataccag ggagcaatgt tttgagatta aaggttaccc ggaatggtgg
      781 actaaaccgg gaaaggtagc ggcggcaacg gcggagccac caccagccac cactgatcga
      841 gaacccaatt tagggttcgg aggagtcgca gcaaccacca acgaacaagg tatgtttctc
      901 agacctttct catctccttt tcaaaattgt agctccaata agataagaga caaattgaat
      961 ttgggaaata gagaaagaat tcatgagatt aacttgggaa ttcatatgaa tctgaaaaat
     1021 ggtagagaca aacatgcgta catagggaat accaaagagg taacatgtac tgatcaaagt
     1081 cagactagga tagaatctaa ggaaacggtt gggcttgatg gacataagtc tcatagtggg
     1141 cctgttagtg ggcttgatat aagaaataag tttattgaga aagacaggcc tgatagaagt
     1201 aagaaaatta gcctaggaaa ctctagacat tatattgggc ctgttaagaa ggatagacaa
     1261 aaggaaaaat ataaaacgtg cctagaaaaa tctaaactta ttattccttg tcaaaatagt
     1321 ttctcggcct tgtcaaagaa acaagacgat gagatgtccc ggtccgaggc aaatatagtc
     1381 tctgaaaatt ttaaaactaa ttcatggata cttgattgtg gggccacgga cacaatgacc
     1441 tttgataaaa atgatattgt ttttaaaact aaaccgaaaa ggaataaaat tcaaactgct
     1501 aacggtgaac ttattaatgt taaaggtggt ggaactatcg aaatttcacc aacgattaaa
     1561 ttacctaatt gtctatatat tccagctttg tctcataagc tgttatcggt aagtcatgta
     1621 acaaaagaat taaactgtaa agtcctcatg tatccaacat tctgcatctt gcaggatatt
     1681 cggacgggga cggtgattgg gcgtggcact gaaaaaaaag ggctatatta tattgacgaa
     1741 ttttctcaac ggggtactgt gttgcttgct cacggaacac ccacgagaga agcttggtta
     1801 tggcatcgaa gactgggaca tccttcagtc ggatatctac gttttttatt tcctagttta
     1861 tttccttcta atgttaactt atgttgtgaa acttgtattt tggcgaaaag ccatcgtagt
     1921 acctttaaac cttctaatat tcggaagaat gtaccttttg ctttaattca ttctgatgtt
     1981 tggggaccgg ctccgattaa tggggggaaa aactttagat actttgttac ttttattgat
     2041 gattgtactc ggatgacatg gatctatttt ttaacacaca aatccgacgt ttatgaaaaa
     2101 ttgtctcttt tataa
//
LOCUS       XM_071831159            1173 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840920), mRNA.
ACCESSION   XM_071831159
VERSION     XM_071831159.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1173
                     /gene="LOC139840920"
                     /note="uncharacterized LOC139840920; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840920"
     CDS             1..1173
                     /gene="LOC139840920"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687260.1"
                     /db_xref="GeneID:139840920"
                     /translation="MKLNPKKCSFGVEEGKFLGYYITRKGIQANLEKIDRLNQLQTPA
                     TKKYMQSLNEKLASLSRFVSRGAEKKLPFFKILKGCLGKKKIVWNEEAEKAFVEMKEY
                     IAKLPTLTSPEEGETLFIYLAASKECISTVLVTERERVQVLSKAEKSGRMAKWAIELG
                     EHDIEFRVRHAIKGKVPVDFIAKIDSIDEEDTKNSTQVITPRIESEEWKLYTDVASSS
                     DGSGAGLMLVNSEGKEFTYELRFEFATTNYEAEYEALLAGLRMVKELKIPHLRAFIDS
                     QLVANQIMGTFEARQPTIQQYLTKAKELSESFKSFDIEHVRRSQNKKADALSKLASLT
                     FEHLAKEVLVEVLEKKSILEEEVNDLVQEDEVTSMTPLQVYLETGKLPEDKTNQGR"
     misc_feature    <1..66
                     /gene="LOC139840920"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    262..>444
                     /gene="LOC139840920"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    622..996
                     /gene="LOC139840920"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(637..648,736..744,751..753,823..825,943..945,
                     985..987)
                     /gene="LOC139840920"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgaaactaa acccaaagaa atgttccttc ggagttgagg aagggaaatt tcttgggtat
       61 tatatcacca gaaagggaat ccaagcaaat ctagaaaaga tagacaggct caatcaactc
      121 caaaccccag caactaaaaa atacatgcag agtttgaatg agaaattggc atcactcagc
      181 aggttcgtat caaggggagc agaaaagaaa ctacccttct tcaaaatctt gaaaggatgc
      241 ttggggaaga agaaaattgt ttggaacgaa gaggctgaga aggcattcgt cgaaatgaag
      301 gagtacattg ccaagctccc taccttgact tcacccgaag aaggagaaac actcttcata
      361 tacttggctg cttcgaaaga gtgcattagc acagtattgg tcaccgaacg agaaagagtg
      421 caagtactct cgaaagctga aaaatcgggg agaatggcca aatgggccat tgagctaggt
      481 gaacatgaca ttgagttcag agttaggcac gcaatcaaag gaaaagttcc ggtagacttc
      541 atcgctaaaa tagatagcat tgatgaagaa gatacaaaga actccactca agtcattacc
      601 ccgaggattg aaagtgaaga atggaagttg tacaccgatg ttgcgtcgag ttctgatgga
      661 tcaggtgctg gtctgatgtt agtaaactcc gaaggaaaag agtttactta tgaactccgt
      721 tttgaattcg caacaaccaa ttacgaagct gagtacgaag cgctactcgc aggactgaga
      781 atggtgaagg aattaaagat cccccacctt cgcgctttca tcgactcaca actagtggct
      841 aaccaaatca tgggcacttt tgaagcaagg caacccacca tccaacagta cttgacaaaa
      901 gcgaaggaac tgagtgaaag cttcaaaagt tttgacatcg aacatgtccg acgaagtcaa
      961 aataagaagg cagacgcact gagcaaactc gcttcgttga catttgagca tcttgcaaaa
     1021 gaagtattgg tggaggtgct agaaaagaaa tcgatcctag aagaagaagt caatgacctc
     1081 gtacaagaag acgaggtaac atcgatgact ccactgcaag tatatcttga aacaggaaaa
     1141 ttaccagagg ataaaacgaa tcaaggaaga taa
//
LOCUS       XM_071831160             753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840921), mRNA.
ACCESSION   XM_071831160
VERSION     XM_071831160.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..753
                     /gene="LOC139840921"
                     /note="uncharacterized LOC139840921; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840921"
     CDS             1..753
                     /gene="LOC139840921"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687261.1"
                     /db_xref="GeneID:139840921"
                     /translation="MDLEDLLNSQSESGESVTDSDSAESDFDEDLIQDGYNALNLLDS
                     LDAMDEEPTIMLEAVASYDMLIWHVFFGPAGSNNDINVLNESDLFEDLLDGRALEVRY
                     TINGHKFTKGYYLVDDIYPKWATLVKSFKCSIEPKNLKFKSFQEAARKDVERAFGVLQ
                     GRWAILKYPTRPFSINKIRRIMYTCVILHNMITEDNVRNICGLEEDYLRNRENMTRRT
                     WAERVQLQDWVVREMRDRRAHHILRNSLIEHI"
     misc_feature    <154..585
                     /gene="LOC139840921"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggatttgg aagatttatt aaattctcaa agcgagagcg gggagagcgt gacagatagt
       61 gatagcgcag agtccgattt cgatgaagat ttaattcaag acggttacaa cgcgcttaac
      121 ttactcgatt cgcttgatgc aatggacgaa gaaccaacaa taatgctcga ggcggttgcg
      181 tcctacgata tgttgatttg gcacgttttc tttggtccag cgggttcgaa caatgatatt
      241 aatgttctta atgaatcgga tttgttcgaa gatttattgg atggtcgagc tctggaggtc
      301 cgttacacta tcaacgggca caaatttact aaagggtatt acttggtaga tgacatatac
      361 ccaaaatggg caacacttgt caagtcgttt aaatgttcga ttgaaccaaa aaatttaaag
      421 tttaaaagtt ttcaagaagc cgcaagaaag gacgtggaac gagctttcgg tgttcttcaa
      481 ggtcgttggg caatactaaa atacccaaca agacctttta gtatcaataa aatacgtcga
      541 atcatgtaca cttgtgttat acttcacaac atgatcaccg aagacaacgt gcgcaacata
      601 tgcggcctcg aagaggatta tctccgaaat cgagaaaaca tgacgcgacg tacttgggcc
      661 gagagagttc agctccaaga ttgggtggtt cgagagatgc gagatcgaag agcgcatcat
      721 atccttcgca acagtttgat cgaacacatt tga
//
LOCUS       XM_071831161             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840922), mRNA.
ACCESSION   XM_071831161
VERSION     XM_071831161.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139840922"
                     /note="uncharacterized LOC139840922; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840922"
     CDS             1..576
                     /gene="LOC139840922"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687262.1"
                     /db_xref="GeneID:139840922"
                     /translation="MKAHIANLPSLTSPKIGETLYLYLATFKECISAVLVVERERVHV
                     LIYFVSRVLHGAEVNYPELEKLTLALVHTARKLRRYFQAHPVIVLTNKQIKQVLMKPE
                     KSGRMAKWAIELGEHDIDFQARHSIKAQVLADFMAETTMTNEKSNSTFAQIITPSVET
                     EEWKLFTDGASSSDGSRAGLMLINPEGQEFT"
     misc_feature    49..348
                     /gene="LOC139840922"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
ORIGIN      
        1 atgaaggcac acatagctaa tctgccaagc cttacgtctc caaagatagg ggaaacactc
       61 tatctctacc tagcaacgtt caaggaatgc atcagcgcgg tactagtagt agaacgagaa
      121 agggtacatg tcctcatata ctttgtaagt cgggttctac acggtgcgga agttaactac
      181 ccagagcttg aaaagctcac actcgcctta gttcacactg ccaggaaact acgaaggtac
      241 tttcaagctc atcctgtcat tgtgttaact aacaagcaaa tcaagcaggt acttatgaag
      301 ccagaaaagt cgggtcgaat ggccaaatgg gccatagaac tcggggaaca tgacattgat
      361 ttccaagctc gtcattcaat caaggcccaa gtgctagcag acttcatggc agaaacaaca
      421 atgacaaacg aaaagagtaa ctccaccttc gcacaaatta tcactccgtc tgtcgaaacg
      481 gaggaatgga aattgttcac tgacggagct tctagctctg atggctcaag ggcagggctt
      541 atgttaatta acccagaggg acaggagttc acataa
//
LOCUS       XM_071831162             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides golgin candidate 6-like
            (LOC139840923), transcript variant X1, mRNA.
ACCESSION   XM_071831162
VERSION     XM_071831162.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139840923"
                     /note="golgin candidate 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840923"
     CDS             152..661
                     /gene="LOC139840923"
                     /codon_start=1
                     /product="golgin candidate 6-like isoform X1"
                     /protein_id="XP_071687263.1"
                     /db_xref="GeneID:139840923"
                     /translation="MIGISHILYCSQHEILSFSGFPVLLGILNERDDVEMIRGALETL
                     VSALTPIARAKLPPNEVQPTLMHTDLLSSEGQSISLLLSLLSRFLKGEDDFYIRYYTL
                     QLLTALLTNSPIRLQEVILIVPYGITQLYMLMDREVIRNEALFQSVTPASWMMLLLPQ
                     FEVVWRCSH"
     polyA_site      846
                     /gene="LOC139840923"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaaaaggta tattgatgaa aataacctaa cgagctaggc acatgttaat gtttaacatt
       61 atttttctat gatggagctt caatctgttg ttgctgaaag tcatgctgcc catcttgctt
      121 ttggagaaat gggtcaatac attatttttt tatgataggt atctcacaca ttttatactg
      181 ttcacaacat gaaatcttgt ctttttcagg ttttcctgta ctgttgggca tcttaaatga
      241 acgtgatgat gttgaaatga ttcgaggggc tttagagaca cttgtaagtg cgttaacacc
      301 aattgctcgt gcaaaattgc ctccaaatga ggttcaacca actttgatgc acactgatct
      361 attatcaagt gaagggcaaa gcatttcact acttttaagc ttattgtcaa gatttttaaa
      421 gggagaggat gacttttaca ttagatatta tacacttcaa cttttaactg cccttttaac
      481 gaattctccc attagattac aggaagtcat tcttattgtc ccgtatggta taactcaact
      541 gtacatgctt atggaccgag aggttataag aaatgaagcc ttatttcagt cggttacccc
      601 tgcatcatgg atgatgctac tcttgcccca attcgaggtt gtttggagat gttctcatta
      661 aaacatcatt gtacaataag acttttttct ataatttaat cacatgtact tagcaaaatg
      721 tcatatctga tgcgtttgtt ctgtgctttt gttgatgaac acgcattgta tgtgattgta
      781 taatgagcaa aaatcatata tattgttcat tgtgaattac cattattgaa gtagttaaat
      841 attcaa
//
LOCUS       XM_071831163            1302 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides golgin candidate 6-like
            (LOC139840923), transcript variant X2, mRNA.
ACCESSION   XM_071831163
VERSION     XM_071831163.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1302
                     /gene="LOC139840923"
                     /note="golgin candidate 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840923"
     CDS             635..1117
                     /gene="LOC139840923"
                     /codon_start=1
                     /product="golgin candidate 6-like isoform X2"
                     /protein_id="XP_071687264.1"
                     /db_xref="GeneID:139840923"
                     /translation="MDLVSGYNLQGFPVLLGILNERDDVEMIRGALETLVSALTPIAR
                     AKLPPNEVQPTLMHTDLLSSEGQSISLLLSLLSRFLKGEDDFYIRYYTLQLLTALLTN
                     SPIRLQEVILIVPYGITQLYMLMDREVIRNEALFQSVTPASWMMLLLPQFEVVWRCSH
                     "
     polyA_site      1302
                     /gene="LOC139840923"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attgctagct gattaaaaaa aaacccaaat acgaaccgtt gtaacccttg attcaatcac
       61 cttcatcaaa taaccttctt tcacaaccgc tgtaatttct ttcctatcat ctacgattaa
      121 ccatcaatac atccaaaatc aatcgctata gaacaatcat gatgtatcat tatgttttgt
      181 aaatcgggtt tttgatcaat agttaataat gaagaagatg gatttgatgt ctgtctcatg
      241 tctggttaca acttacaagg ttaaagttga tccagcaaaa ccagcatctc tttcatggaa
      301 gaggaaattg aacactaaag aaagtgtgat tttagagctt ggtataaagt caaagatgtg
      361 cttgatattt tgggcattaa aattattcct tccttacatc aatgaatttc tccaaaagat
      421 gaaagctttg tttttaggtg atcctagtat tacaacggta gacatatctc tagcattgtt
      481 tgggatgacc aggccactca attagttcag tttgtgtcta gtagcctttt ggatgcaaaa
      541 ccgattggta ttcccaacca taatgcaaaa ctgtctaaat ggcgtggtat gtaaatcata
      601 ttaggttttt gatcaatagt taaaaataaa gaagatggat ttggtgtctg gttacaactt
      661 acaaggtttt cctgtactgt tgggcatctt aaatgaacgt gatgatgttg aaatgattcg
      721 aggggcttta gagacacttg taagtgcgtt aacaccaatt gctcgtgcaa aattgcctcc
      781 aaatgaggtt caaccaactt tgatgcacac tgatctatta tcaagtgaag ggcaaagcat
      841 ttcactactt ttaagcttat tgtcaagatt tttaaaggga gaggatgact tttacattag
      901 atattataca cttcaacttt taactgccct tttaacgaat tctcccatta gattacagga
      961 agtcattctt attgtcccgt atggtataac tcaactgtac atgcttatgg accgagaggt
     1021 tataagaaat gaagccttat ttcagtcggt tacccctgca tcatggatga tgctactctt
     1081 gccccaattc gaggttgttt ggagatgttc tcattaaaac atcattgtac aataagactt
     1141 ttttctataa tttaatcaca tgtacttagc aaaatgtcat atctgatgcg tttgttctgt
     1201 gcttttgttg atgaacacgc attgtatgtg attgtataat gagcaaaaat catatatatt
     1261 gttcattgtg aattaccatt attgaagtag ttaaatattc aa
//
LOCUS       XM_071831164            1278 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840924), mRNA.
ACCESSION   XM_071831164
VERSION     XM_071831164.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1278
                     /gene="LOC139840924"
                     /note="uncharacterized LOC139840924; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840924"
     CDS             1..1278
                     /gene="LOC139840924"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687265.1"
                     /db_xref="GeneID:139840924"
                     /translation="MSRWDMAVACHAFSYVLKSDARIWFDSLAKDSISSFEDVKRIFR
                     SKFSQQKKHKKNHVAAHSIKQKDNEASRAFLGQYTDETQQIPGLPESQRISGLLYGCR
                     TRALVEHLSRDLPDTYEALLDKAYVWLDVKDTANSFIYEESQGFKRKEKASHQEDKSG
                     RKNERNRFSPTEEKTPPAVEKLRTYKRERKSGVIDWEEISFLALDTITPSDKPVTVNG
                     RIFEREVHRVYLDSGSACDIMYEHFFDQLSPSIKARLSPPRVPLVGFSGERCWPIGEI
                     DLDFTIREPPLSRTETLDFVLVRSTSQHKILLGRVAMMKMGIIVYTVHQLVKFYTPEG
                     IGTLASTYDREIVIMAIKEMEERPGECILKTREKDPSEEKISINPLFPEQQVTIGGSL
                     PTEMKRRLRKLLQDNIDIFAWEYGDMTSILLNA"
     misc_feature    646..930
                     /gene="LOC139840924"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(691..693,697..699,703..705,784..792,919..921)
                     /gene="LOC139840924"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    691..699
                     /gene="LOC139840924"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    691..693
                     /gene="LOC139840924"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(784..795,805..816)
                     /gene="LOC139840924"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgtcgagat gggacatggc tgtagcttgc catgcatttt catatgtgct taaaagcgac
       61 gcaaggatct ggttcgactc tttggcgaag gattccatct cgagtttcga ggacgttaaa
      121 cgaattttta ggtcaaaatt cagtcaacaa aagaaacaca agaagaatca cgttgctgcc
      181 cacagtatca agcaaaagga taacgaagct tcaagagctt ttcttggcca gtatacggac
      241 gagacccaac agatcccagg actcccagag tcacaaagaa tctcgggact cttatacggc
      301 tgtaggaccc gagcgttggt ggagcatctt agccgagatc tccccgacac ttacgaagct
      361 ttgctagaca aggcgtatgt ttggttagac gtgaaagaca ctgccaatag cttcatatac
      421 gaagaatctc agggctttaa acgaaaggag aaagcaagtc accaagaaga taagtccgga
      481 agaaagaacg agcggaacag attctcccct acagaagaga aaacacctcc agccgtcgag
      541 aagctaagaa cctacaaaag ggagagaaag agtggggtaa tagattggga agagatctcc
      601 ttcctagcac tcgataccat cactccctcc gataaacctg ttacagtcaa tggacgaatc
      661 ttcgagagag aagtgcaccg agtttactta gatagcggca gcgcatgcga catcatgtac
      721 gaacatttct tcgatcaact tagcccttcc atcaaagctc gcctaagtcc accgagggta
      781 cctctagtcg gattctccgg agaaagatgc tggcctatcg gagagataga ccttgatttc
      841 accatcagag agccaccatt atccaggacc gaaacacttg acttcgtatt agtccggtct
      901 acctcacagc ataagatttt gctaggaaga gtagccatga tgaaaatggg aataattgta
      961 tatactgtac accaattggt gaagttctac acacccgaag ggatcggtac cctagcttca
     1021 acttatgatc gggagatagt gatcatggct atcaaggaga tggaggaaag gccaggggaa
     1081 tgtatcctca aaactagaga gaaagatcca agtgaagaga aaatctccat caatcctctg
     1141 ttccccgagc aacaagtaac tatcggaggt tccctaccta cggaaatgaa gaggaggctt
     1201 cgtaagttgc tacaggacaa cattgatatc ttcgcttggg aatacggaga tatgaccagc
     1261 attctcttga acgcttag
//
LOCUS       XM_071831166             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840926), mRNA.
ACCESSION   XM_071831166
VERSION     XM_071831166.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139840926"
                     /note="uncharacterized LOC139840926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840926"
     CDS             1..501
                     /gene="LOC139840926"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687267.1"
                     /db_xref="GeneID:139840926"
                     /translation="MKTLLRELPTLNAPIAGETLMLYLATSKEAISSVLVADRGQVQM
                     PVYFVSKALSGSEVNYPPIEKQVYALVLYKLEVSGEVEALAKGTTIGHDESQIWELYT
                     DGAYGPECTGAELVLTGPDGEEHTYALRFTFAATNNESEYEALLSEMRIVQQLEINHL
                     DAYVDS"
     misc_feature    4..213
                     /gene="LOC139840926"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    292..>498
                     /gene="LOC139840926"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    order(307..318,409..414,421..423,493..495)
                     /gene="LOC139840926"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgaagacgc tcctaaggga gctgcctacg ttgaatgcgc ctatagcggg ggagacgttg
       61 atgttgtatc ttgcgacttc aaaggaggct attagttccg ttctcgtcgc agataggggg
      121 caggtacaaa tgcctgtgta ttttgtcagc aaagcactta gtggcagcga ggttaactac
      181 ccacccattg aaaaacaggt gtatgcgcta gtgttgtaca agcttgaggt ttcgggagaa
      241 gtagaggcac tcgcgaaagg taccacaata ggtcatgatg agagtcagat atgggaatta
      301 tatacagatg gtgcttatgg acccgaatgc acgggcgccg aattggtcct cacaggtcct
      361 gatggagagg agcacactta tgcactccga ttcacatttg cagcgactaa caacgagtct
      421 gagtatgaag cattactatc cgagatgcgt atagtgcaac aacttgaaat aaatcacttg
      481 gacgcatatg tggactcata g
//
LOCUS       XM_071831167             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840927), mRNA.
ACCESSION   XM_071831167
VERSION     XM_071831167.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139840927"
                     /note="uncharacterized LOC139840927; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840927"
     CDS             1..606
                     /gene="LOC139840927"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687268.1"
                     /db_xref="GeneID:139840927"
                     /translation="MKETDKMEKLTDLYIKEIVSRHGVPISIISDRDSRYTSKFWQSL
                     QKALGTRLDMSTAYHPQTDGQISPWKGVIRIGKRGKLSPRYVGPFEVIERIGPVAYRL
                     KQPHEVIGIHNAFHVLNLMKCLSDENLVIPLEELSIDDKLHFVEEPVEVLDREVKKLK
                     HSRIPIVKVRWNARRGLEFMWEREDHIRQKYPYLFDNQSTS"
     misc_feature    <46..180
                     /gene="LOC139840927"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgaaagaaa ccgacaaaat ggaaaaattg acagatttgt atatcaagga gattgtctct
       61 aggcatggag ttccaatttc tattatctct gaccgagata gcagatatac ttcaaaattt
      121 tggcaatctt tgcaaaaagc tctaggtact cgtttggaca tgagtacggc ttatcatccc
      181 caaaccgatg ggcagatttc tccatggaaa ggagtaataa ggattgggaa gcgaggaaag
      241 ctgagcccaa gatatgtagg accttttgag gttattgaaa ggattggtcc agttgcatat
      301 agattgaaac aaccacatga ggttattggt attcataatg ctttccatgt tttgaacttg
      361 atgaaatgtt tgtcggatga gaatttagta attcctttgg aagaactaag tatcgatgac
      421 aagttgcatt ttgttgagga gccagtagag gtattggatc gtgaggtgaa aaagctgaag
      481 catagtagaa tcccaattgt taaagttcgt tggaatgccc ggagaggtct agagttcatg
      541 tgggaacgtg aggaccatat aaggcagaaa tatccctatt tgttcgataa tcagagtacc
      601 tcctaa
//
LOCUS       XM_071831168             310 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840928), mRNA.
ACCESSION   XM_071831168
VERSION     XM_071831168.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..310
                     /gene="LOC139840928"
                     /note="uncharacterized LOC139840928; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840928"
     CDS             1..285
                     /gene="LOC139840928"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687269.1"
                     /db_xref="GeneID:139840928"
                     /translation="MDGQICCMVMRINLDCNACCRKMRRNILNMKEIEKHLIEKQQNR
                     VSVCGRFKPADVAIKLRKKMNRRVEILEIEEMATRYDIEQEAPIVNHYKY"
ORIGIN      
        1 atggatggac agatatgttg catggtgatg aggattaacc ttgattgtaa cgcatgttgc
       61 agaaagatga ggagaaacat tttaaatatg aaagagatag agaagcactt gatagaaaaa
      121 caacaaaaca gggttagcgt atgtgggagg tttaaacccg cggatgttgc tataaaacta
      181 agaaagaaaa tgaatcggcg agttgaaatt cttgaaatcg aagagatggc cactcgctat
      241 gacatagaac aagaagcgcc aatcgtaaat cactacaagt attgaaggtc ccaactttat
      301 acggcataaa
//
LOCUS       XM_071831169            1899 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840930), mRNA.
ACCESSION   XM_071831169
VERSION     XM_071831169.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1899
                     /gene="LOC139840930"
                     /note="uncharacterized LOC139840930; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840930"
     CDS             1..1899
                     /gene="LOC139840930"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687270.1"
                     /db_xref="GeneID:139840930"
                     /translation="MKSRCSLKVNIDATLSYVHLRSCSHSLGEGSSRGARGGSRVVTP
                     GRIRVGSWNVGTLTGKSIELVDTFLKCNVDIMCVQETRWKGQEAVDINNYRLWYSGSR
                     TARNGVGIFLGPTHKDHVVDVGRFSDRIMSVTLIINEETFTVISAYAPHVGLGEADKK
                     SFWELLDEVVRGCPADHPLSIGGDLNGHIGTEVEGYRGAHGGFGFGVRNEEGRSILEF
                     AIAHDLFVANSFFKKRDAQLATYHSGGHSTQIDFFLLRKGDLRTCKDCKVLPTLTCSS
                     QHRLLVMDLGTHGRVNRRARAIQPRILWKNLNGAKAETFRANVVERVGAETKNVDFID
                     ADQMWNSLASTIRGVAKESLGVAVGTSRAQKGCRESWWLSDEVQTKVALKQARFRELT
                     SFRGGTLVERYSIENSYREAKREAKIAVTHAKDKAYEELYKRLYSKEGANDIYRIAKA
                     RERRRRDIDNIKYIKDETGQTIVKEDKIRKRWEEYFSSLFDGGRSGNGEPHDYDMAPH
                     YQNNCFCTRINQEEVRSALQKMGRNKVVGPDQIPIEAWRCLGDDGVRWLTNLFNTTFR
                     STKMPMEWRLSEVIPIYKNKGDAQTCSNYRGIKLLSHTMKLWERVIETRLRRETKVSE
                     NQFGFMPG"
     misc_feature    145..855
                     /gene="LOC139840930"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(157..159,238..240,442..444,550..552,556..558,
                     751..753,829..834)
                     /gene="LOC139840930"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(238..240,829..831)
                     /gene="LOC139840930"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(442..444,556..558,832..834)
                     /gene="LOC139840930"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    1729..>1896
                     /gene="LOC139840930"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgaagtcac gttgtagtct aaaagttaat atagacgcta cactttctta tgttcacttg
       61 aggtcatgtt ctcatagttt aggggagggt agctctagag gggctagggg agggagtaga
      121 gtagtaaccc ctggtaggat tagagtggga agttggaatg taggaacttt gacgggcaaa
      181 agtattgagc tagttgatac atttcttaag tgtaatgtgg atataatgtg cgttcaagag
      241 actagatgga agggacagga ggcggtggac attaataact acaggttgtg gtactcgggc
      301 tccaggacag ctcgaaatgg agtaggaatc tttttaggtc caacacataa ggatcatgtt
      361 gttgatgtag gtaggtttag cgataggatt atgtcggtta cgttaataat taatgaggag
      421 acgttcacgg tcattagtgc ttacgcaccc cacgtaggtt taggagaagc ggataagaag
      481 agtttttggg aattgttaga tgaggttgta agggggtgtc cagctgacca tcctttgagt
      541 atagggggcg accttaatgg gcatatagga acggaggtag agggatatag gggagcccac
      601 gggggctttg ggtttggggt cagaaatgaa gaagggcgat caattctaga gttcgccatt
      661 gcccatgatc tatttgtagc aaactctttc ttcaaaaaga gggacgctca gttagccact
      721 tatcatagtg ggggtcatag tacccagatc gactttttcc ttcttcgaaa gggtgacctc
      781 aggacctgca aggattgtaa ggtcctccca accttgactt gttcatccca gcatagactg
      841 ttggtcatgg atttaggtac ccatggacgg gtaaacagga gggcgagagc gatacaacct
      901 agaatcctct ggaagaactt aaacggagcg aaggcggaga cttttagagc taatgttgtt
      961 gaaagagtgg gtgctgaaac gaaaaatgta gactttattg atgcagacca gatgtggaac
     1021 agcctagcgt ccaccattag aggagtggcc aaagaatcct tgggagtggc agttggtacg
     1081 tcgagagccc aaaagggttg tagagaatca tggtggctta gtgacgaggt ccaaactaaa
     1141 gtcgcactta aacaggcgag gtttcgggag cttacctcct ttagaggggg tacacttgta
     1201 gaaagatata gcatagaaaa tagttataga gaagccaaaa gagaagcaaa gatcgccgtt
     1261 acgcatgcaa aagataaagc atacgaagaa ttatataaga gattatactc taaagaggga
     1321 gcaaacgaca tctacaggat agccaaagct agggagcgtc ggagaagaga catagataac
     1381 attaaatata tcaaagatga aactggtcaa accatagtga aggaagacaa aattaggaaa
     1441 cgatgggaag aatatttctc ttccctgttc gatgggggaa ggtcgggtaa tggagaaccc
     1501 catgattatg atatggcccc acactatcaa aacaactgtt tttgcacgag gatcaaccaa
     1561 gaggaagtta gatcggcctt acagaagatg gggagaaata aagtagtagg accagaccaa
     1621 atccccatag aggcgtggcg gtgcttaggc gatgatggag ttaggtggtt gacaaatctt
     1681 ttcaacacga cgtttagaag cacaaaaatg ccaatggagt ggagactgag tgaggtcatt
     1741 cccatttaca agaacaaagg ggatgcgcag acatgtagca actatagagg tataaagtta
     1801 cttagccata ccatgaaact atgggagaga gtgattgaga ctaggcttag acgcgagact
     1861 aaggtgtcag agaaccaatt tggtttcatg ccaggatga
//
LOCUS       XM_071831170             537 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840931), mRNA.
ACCESSION   XM_071831170
VERSION     XM_071831170.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..537
                     /gene="LOC139840931"
                     /note="uncharacterized LOC139840931; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840931"
     CDS             1..537
                     /gene="LOC139840931"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687271.1"
                     /db_xref="GeneID:139840931"
                     /translation="MMRNGLWEWNWARDIGTTNHDIMLELTSYIGEVSFQNRKVHGSG
                     ASEMTVFSSKFTGSHINEVILPISDKVMRWLKLIPRKVNIFIWKLSWDRGSILSRRGM
                     EIQRIGRLLCDRWVEPIDHVLFSCSIASALWLIVQIWLNLHFPVFDSWFSCMVWFDAP
                     HLPLKSKDVIYVIPAAFL"
     misc_feature    <220..396
                     /gene="LOC139840931"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgatgcgaa atgggttgtg ggaatggaat tgggctcgtg atattggcac aacaaatcat
       61 gacattatgc ttgagttaac atcgtatatc ggtgaggtgt cctttcaaaa tcgcaaggta
      121 catgggagtg gagcatcgga aatgacagtg ttttcaagta aattcacagg ttctcacatc
      181 aacgaggtga tccttcctat ttctgacaag gtcatgagat ggttaaagtt gatccctcga
      241 aaggtcaaca tttttatttg gaagctaagt tgggatcgag gctcaatttt atcaagacgg
      301 ggcatggaaa ttcaaagaat cggccgtctc ttatgcgatc gttgggttga acctattgac
      361 catgttttgt tttcttgttc gatagcttcg gctctttggc tcatagtaca gatttggtta
      421 aacttgcact ttccggtgtt cgactcatgg ttctcgtgta tggtctggtt cgacgcgccg
      481 catcttccat tgaaatcgaa ggatgtcata tatgtcatac ccgctgcttt tttatga
//
LOCUS       XM_071831173             609 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840932), mRNA.
ACCESSION   XM_071831173
VERSION     XM_071831173.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..609
                     /gene="LOC139840932"
                     /note="uncharacterized LOC139840932; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840932"
     CDS             1..609
                     /gene="LOC139840932"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687274.1"
                     /db_xref="GeneID:139840932"
                     /translation="MSSHIWGILVHKQSLWVKWIHTYKLDGRSIWDVSNKATDSFSWR
                     KVLSIRPLVRSYFITKIGDSLITNAWFDNWSCMGPLYALISRRDICRAGFSDRSLVVD
                     LVDHNTLGWPPDWLQKYPSLGDINCPVINDSHDSTSIPRHAFMLWLAIKKKLKTQDRL
                     HEWEKQVGVQLGHVSPVLTLSTHSAVPGSPLEPGETLSPISP"
     misc_feature    <415..>489
                     /gene="LOC139840932"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtcttctc atatttgggg gattttggtt cataaacaat cgttatgggt gaagtggatt
       61 cacacttaca agttggatgg gaggagtata tgggatgtta gtaataaagc tactgatagt
      121 tttagttgga gaaaagtgtt aagcattcgc cctctagttc gaagttattt cattacaaaa
      181 attggggata gtttgataac aaatgcatgg tttgataatt ggtcttgtat gggtccttta
      241 tatgctctta tctctcgaag ggatatatgc agagcgggtt tttcggacag gtcgttggtg
      301 gttgatttag tcgatcataa cactttgggt tggcccccgg attggctgca aaaatacccg
      361 tcgctaggag atataaactg tcctgttatt aatgattcgc atgattctac gagtattcca
      421 agacacgcgt ttatgttatg gctcgctatt aagaaaaagc taaagacgca agatcgctta
      481 catgagtggg agaaacaggt tggggtccaa ttgggacatg ttagccctgt gttaactttg
      541 tcaacccatt cagcggtccc cggtagccca ctggagcctg gcgaaacact atcacccatt
      601 tctccatag
//
LOCUS       XM_071831174             681 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139840933), mRNA.
ACCESSION   XM_071831174
VERSION     XM_071831174.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..681
                     /gene="LOC139840933"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139840933"
     CDS             1..681
                     /gene="LOC139840933"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687275.1"
                     /db_xref="GeneID:139840933"
                     /translation="MKNVPYASAVGSLMYAMMCTRSDICFAVGMVSRYQSNPGLTHWK
                     AVKRILRYLKGTSHYSLCYEGNDLQMRGYTDADWGRDMDERKSTSGFVFLLNKGAISW
                     SSKKQSCIALSTMEVEFVAFSAAAQEVVWLSRFLSSLGVVGNTIDRALIYSDNEAAIA
                     YSKDPKFHCKTKHIDIKYNYVKDKIATKKVSMEYISTHDMVADPLTKPIPRDAFVKHV
                     RSQGLRRL"
     misc_feature    211..636
                     /gene="LOC139840933"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(223..234,337..345,352..354,460..462,538..540,
                     619..621)
                     /gene="LOC139840933"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaaaatg ttccttatgc tagtgcggtt ggaagtctca tgtatgctat gatgtgtacg
       61 agatcggata tctgctttgc tgttggcatg gtaagccgat accaatccaa tccaggttta
      121 acccattgga aagccgtaaa aaggatacta aggtatctta agggtactag tcattactct
      181 ttgtgctacg aaggaaatga tcttcaaatg agaggctata ctgatgctga ttggggaaga
      241 gatatggatg aaagaaaatc cacctctggc tttgtttttc tattaaacaa aggtgctata
      301 tcttggagta gcaagaaaca atcatgtata gcattgtcta caatggaagt tgaatttgtg
      361 gcattttcag ctgctgcaca agaagttgtg tggcttagtc gatttttgag tagtttgggg
      421 gttgttggca ataccattga tcgagcattg atatactctg ataatgaggc tgccattgca
      481 tattcaaaag accccaagtt tcattgtaaa acaaagcaca ttgacataaa gtacaattat
      541 gtgaaggaca agattgcaac aaagaaagta agtatggagt acatatctac gcatgatatg
      601 gtagcagatc ctctgacaaa acccatacct agagatgcat ttgttaagca tgttaggtct
      661 caaggattgc gtagattgtg a
//
LOCUS       XM_071831175            1012 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840935), mRNA.
ACCESSION   XM_071831175
VERSION     XM_071831175.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1012
                     /gene="LOC139840935"
                     /note="uncharacterized LOC139840935; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840935"
     CDS             536..1012
                     /gene="LOC139840935"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687276.1"
                     /db_xref="GeneID:139840935"
                     /translation="MPDDIMKFMTNGWLDISIITWFSMTCFTYQKRLTTPKRCVFLNP
                     NRISQGICSEGPEEVTAYIKKIMTQDRDKYYILPYHQLNHWSLFIIYPSKKYGYILDS
                     LKGTKVAQDYLLSGLVDEAIGRCLWDLPPCQQQRSGWECGYYVMKWIHRFILYEQH"
     misc_feature    542..1000
                     /gene="LOC139840935"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 actaagtgct atttattgcg cccttatggg gagaaaaaga ttcgcatggc tatagggatg
       61 gtgcaaccaa tcatggtaga gggaatggag ttatatgatg ctcatgtaat tgttttagtg
      121 gacaccgtgt atcctaaata tgaagacttt gatttgtccg agccaccgcc gccccatact
      181 agtatgactc tagttcaagc taagggtagt ttaattcaat ggccaaagaa gtacattgaa
      241 atctatacgc cttcttctct acctcaaaat gaagaaagga gcaagtttca aaatgaggca
      301 acttcatcta gaaaagaaca agcatcgtta ccgaagaagt caactttaaa aaaggtttca
      361 aatgaagtca tgtgtgcgca tactatctac cataatataa ttaagaagcg acccccaaac
      421 gtgaaaagac tatataggtt atggatgaga agagagagtc cactaacaat cgggcaaaca
      481 tttaaatgtt gataaagaag tctttggcta tgagaaaaat ccctttttta taatcatgcc
      541 tgacgatatc atgaagttta tgacaaatgg atggcttgat atatccatca tcacttggtt
      601 ctcaatgact tgctttacat atcaaaagcg attaaccaca cctaagagat gcgtgttttt
      661 aaatccaaat cggatctcgc aaggtatatg tagtgaggga cccgaggaag taaccgctta
      721 tatcaagaaa ataatgaccc aagatcgcga caaatattac atattacctt atcatcaatt
      781 aaatcattgg agcctgttta tcatatatcc cagcaagaaa tatggctaca ttttggattc
      841 acttaaggga actaaggttg ctcaggatta tctattaagc ggacttgtgg atgaggctat
      901 tggacgttgt ttgtgggatt tacctccgtg tcaacaacaa agaagcggtt gggagtgcgg
      961 gtattacgtt atgaaatgga tccatcgatt tatcctatat gagcaacatt ag
//
LOCUS       XM_071831177             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840936), mRNA.
ACCESSION   XM_071831177
VERSION     XM_071831177.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139840936"
                     /note="uncharacterized LOC139840936; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840936"
     CDS             1..750
                     /gene="LOC139840936"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687278.1"
                     /db_xref="GeneID:139840936"
                     /translation="MSLMTGSSSNSGNQESKVKNIETTESPKFSVDEIEVEEEVKPSP
                     KLKVYKPPIPYPRVIPSEQPKGTVCKYAQLWEIFEALMAKKGEHEQASSAFLEAECAA
                     ILKKSDMPPKLRASINLMSLSVYTQLGLNELKSTNTGVRLINQSISKPIGIAENLVVK
                     IGELEFPADFVVVDMPEDKVVPIVLGIPFLATMGALTDWRTCKLILRDRGKTLSFQTK
                     FSVKRPPTPVDYVNVLTSETDNVKTKTSRKP"
     misc_feature    343..573
                     /gene="LOC139840936"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(418..429,439..450)
                     /gene="LOC139840936"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgagtttga tgacggggag ttcttctaat tcgggtaatc aagagtcgaa agtgaagaat
       61 attgagacta ccgagtctcc taagtttagt gttgatgaga ttgaagtgga agaagaggtg
      121 aaaccttcac ctaaattgaa agtttacaag ccgcctattc catatccgag agttattcca
      181 tccgagcaac caaagggcac tgtttgtaag tatgcccaat tatgggaaat ttttgaggct
      241 ttaatggcga agaagggtga gcatgagcag gcatcctcag cgtttcttga agcagaatgt
      301 gctgctattt tgaaaaagag tgatatgcca ccaaagttac gtgcgagtat caatcttatg
      361 tccttatctg tttatacaca attgggtttg aatgagctta agtctactaa tactggagtt
      421 agattgatta accagtcgat tagtaaaccc atagggattg ctgaaaattt ggtggttaag
      481 ataggtgaat tagagttccc agcggacttt gtggttgttg atatgcctga agataaggtt
      541 gtacccattg ttttaggtat accattttta gcaaccatgg gtgcattaac tgactggaga
      601 acttgtaagt tgattttaag ggatagaggt aaaactttga gttttcaaac aaagtttagt
      661 gttaaacgac cacccacacc cgttgattat gtgaatgtgc ttactagtga aactgataat
      721 gttaaaacta agactagtag aaagccttag
//
LOCUS       XM_071831178             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840937), mRNA.
ACCESSION   XM_071831178
VERSION     XM_071831178.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139840937"
                     /note="uncharacterized LOC139840937; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840937"
     CDS             1..750
                     /gene="LOC139840937"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687279.1"
                     /db_xref="GeneID:139840937"
                     /translation="MSLMTGSSSNSGNQESKVKNIETTESPKFSVDEIEVEEEVKPSP
                     KLKVYKPPIPYPRVIPSEQPKGTVCKYAQLWEIFEALMAKKGEHEQASSAFLEAECAA
                     ILKKSDMPPKLRASINLMSLSVYTQLGLNELKSTNTGVRLINQSISKPIGIAENLVVK
                     IGELEFPADFVVVDMPEDKVVPIVLGIPFLATMGALTDWRTCKLILRDRGKTLSFQTK
                     FSVKRPPTPVDYVNVLTSETDNVKTKTSRKP"
     misc_feature    343..573
                     /gene="LOC139840937"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(418..429,439..450)
                     /gene="LOC139840937"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgagtttga tgacggggag ttcttctaat tcgggtaatc aagagtcgaa agtgaagaat
       61 attgagacta ccgagtctcc taagtttagt gttgatgaga ttgaagtgga agaagaggtg
      121 aaaccttcac ctaaattgaa agtttacaag ccgcctattc catatccgag agttattcca
      181 tccgagcaac caaagggcac tgtttgtaag tatgcccaat tatgggaaat ttttgaggct
      241 ttaatggcga agaagggtga gcatgagcag gcatcctcag cgtttcttga agcagaatgt
      301 gctgctattt tgaaaaagag tgatatgcca ccaaagttac gtgcgagtat caatcttatg
      361 tccttatctg tttatacaca attgggtttg aatgagctta agtctactaa tactggagtt
      421 agattgatta accagtcgat tagtaaaccc atagggattg ctgaaaattt ggtggttaag
      481 ataggtgaat tagagttccc agcggacttt gtggttgttg atatgcctga agataaggtt
      541 gtacccattg ttttaggtat accattttta gcaaccatgg gtgcattaac tgactggaga
      601 acttgtaagt tgattttaag ggatagaggt aaaactttga gttttcaaac aaagtttagt
      661 gttaaacgac cacccacacc cgttgattat gtgaatgtgc ttactagtga aactgataat
      721 gttaaaacta agactagtag aaagccttag
//
LOCUS       XM_071831179             714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840938), mRNA.
ACCESSION   XM_071831179
VERSION     XM_071831179.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139840938"
                     /note="uncharacterized LOC139840938; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840938"
     CDS             1..714
                     /gene="LOC139840938"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687280.1"
                     /db_xref="GeneID:139840938"
                     /translation="MGCWRRTPTGRANGELETLTSLISTFHLDHNAADIWKWSLDSDG
                     LFMVKSLASEIDDRILGSNSFSVSTIRNNLAPKKLEISAWRALHKRLPVRLELDKRGI
                     GLHSVRCPLCDDDLKSVDHSIIFCQQSLDIWERVFKWWDVGPFSSFSVNEVLGMVNNP
                     SMSKFGGMLWLAVRWVSAYIIWKNRNNKVFNGKCWNTPMVFNEIQIKSFEWLSPRAKG
                     RKLEWLTWLSNPYTFLTAP"
     misc_feature    <214..396
                     /gene="LOC139840938"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggctgct ggcgtcgaac tcctacaggt agggcaaatg gtgagttgga aacactcaca
       61 agtctgattt ctacctttca cctcgatcac aatgcagcag atatttggaa atggtccttg
      121 gacagtgacg gtctgtttat ggtaaaatca ttggcatcag aaatcgatga taggatacta
      181 gggtcaaaca gcttttcggt aagcacgatt agaaacaact tagctccgaa aaagcttgaa
      241 atctctgcgt ggcgggcatt gcacaagaga ttacccgtta gacttgaatt ggacaaacgg
      301 gggatcggtc tccatagtgt tagatgcccg ttatgcgacg acgatttgaa atccgtggat
      361 cactctatta ttttttgcca acaatctctc gacatttggg agagggtatt taaatggtgg
      421 gacgtgggtc ccttctcgag cttcagtgtc aacgaggtgc ttggtatggt aaacaaccca
      481 agtatgtcca aattcggggg gatgctttgg ttagccgtaa ggtgggttag tgcttacatc
      541 atttggaaaa accgtaacaa caaggttttt aacgggaaat gttggaacac tccgatggtc
      601 ttcaatgaaa ttcaaatcaa gtcgttcgag tggctttctc caagagcgaa aggtagaaaa
      661 ctcgagtggc taacgtggct ttcgaaccca tatacttttc tcacagcccc gtag
//
LOCUS       XM_071831180            1239 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840939), mRNA.
ACCESSION   XM_071831180
VERSION     XM_071831180.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1239
                     /gene="LOC139840939"
                     /note="uncharacterized LOC139840939; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840939"
     CDS             1..1239
                     /gene="LOC139840939"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687281.1"
                     /db_xref="GeneID:139840939"
                     /translation="MDYMFSSTNNEYHENNINSSQQDDQPPLFLQFPSPFLDHEMDTP
                     TILPNFHHHNHLPTNETSNTNKTLKPKCVRKKRCAGKKDRHSKIHTAQGLRDRRMRLS
                     VHTARKFFDLNDMLGFDKASKTIEWLFSKSQKAIDEITETLQPDDAIQTISKENDGFE
                     SPLSACENESAIEIADSAEKDENLDQIDDESSRKLLLMESYNPLVRESRSEARARARE
                     RTIIKNLEKPKNFFQQDPSNVEFNESRLGFPKNIDNPNIEDQSSSSSSCYPLEYSNTY
                     HFLKQLHLDNNNTYMGNITTISSTNYSVFDYNKTIAEPPPPGWLNSRNTFFGFLGGWD
                     DSQNSRTHESNDEIATNITRMDRMNGEIHNTGSTSRYASRNKAGFCYNSDHDHDELQI
                     LGCLRSPKLSARTSGDRIHG"
     misc_feature    235..672
                     /gene="LOC139840939"
                     /note="TCP family transcription factor; Region: TCP;
                     pfam03634"
                     /db_xref="CDD:460998"
ORIGIN      
        1 atggattata tgttttcttc aacaaacaat gaatatcatg aaaacaacat caattcaagc
       61 caacaagatg atcaaccacc tttgttcttg cagtttcctt caccttttct tgatcatgaa
      121 atggatactc ctacaatcct cccaaacttc catcaccata atcatcttcc cacaaatgaa
      181 acaagcaata caaacaagac gttgaaaccg aagtgtgtaa ggaagaaaag atgtgccggt
      241 aagaaagata ggcatagtaa aattcatacg gctcaagggc ttagagatag gaggatgaga
      301 ttgtccgttc atacggctcg caagtttttt gatctcaatg atatgttagg gtttgataaa
      361 gctagcaaaa ccattgaatg gttgttttcc aagtcccaaa aggcgattga tgagatcact
      421 gaaacgttgc aaccagacga cgctatccaa acaataagta aagaaaatga tgggtttgaa
      481 tcacctttat ctgcttgtga aaatgaatcc gcaatagaga tcgcggattc tgcagaaaag
      541 gatgagaatt tggaccagat cgacgatgaa agttcaagaa aattactatt aatggaaagt
      601 tataatcctt tggtgagaga atcaaggagt gaagcgagag caagagcacg cgaaagaacg
      661 attatcaaga atctagagaa accaaagaat ttttttcaac aagatcctag taacgttgaa
      721 ttcaatgaat cgcgattagg gtttccaaaa aatattgata atcctaacat agaagatcaa
      781 tcatcatcat catcatcatg ttatcctctt gagtattcaa acacttatca ttttcttaag
      841 caacttcact tggataataa taatacttat atggggaata taactaccat ctcatccacg
      901 aattactccg tatttgatta caacaaaact attgccgaac caccaccacc tggctggttg
      961 aattcgagaa acacgttttt tggattcctt ggaggttggg atgattccca gaattcaaga
     1021 acacatgaat ccaatgatga aatcgcgaca aatattacac gaatggacag aatgaatggg
     1081 gagattcata acacaggttc aacttctagg tatgcaagca ggaataaggc cggtttttgt
     1141 tataattcgg atcatgatca tgatgaactc cagattttag gatgtttaag atcacccaaa
     1201 ctaagtgcta gaacctctgg agatcgaatt cacggctag
//
LOCUS       XM_071831181            1002 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840941), mRNA.
ACCESSION   XM_071831181
VERSION     XM_071831181.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1002
                     /gene="LOC139840941"
                     /note="uncharacterized LOC139840941; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139840941"
     CDS             1..1002
                     /gene="LOC139840941"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687282.1"
                     /db_xref="GeneID:139840941"
                     /translation="MYQDHEIMRSSHEEEEDPLFLNFPSPFFDKIATIPILENKHTHQ
                     QQKQPLTISEPSPLLPETKRVNKKSRERHSKIYTAQGFRGRRMRLSLHIARKFFDLQD
                     LLGFDKASKTIEWLFCKSNKAIKEVTQNFNPEQTNYPSSSEEIKDEIKVATNKLPNNS
                     ESRKQIRNNYLIKETRDQARARARDRTKKRLMNKELEKSNQCFRGNPKDEFQKLGLLG
                     YLVSPNNQNILEELGYINSPSDQPLQQQSSTSSSSSFSFKQYSSTNHLLQDHLQSAII
                     DANSFGEWDTNSFITDYFNYGVMQPNIGGHMTAGGIYEQDPSSLFMSTTNISQNQGK"
     misc_feature    208..579
                     /gene="LOC139840941"
                     /note="TCP family transcription factor; Region: TCP;
                     pfam03634"
                     /db_xref="CDD:460998"
ORIGIN      
        1 atgtatcaag atcatgaaat aatgagatca agtcatgaag aagaagaaga ccctttgttt
       61 ttgaactttc cttcaccttt ctttgataag attgctacta ttccgatact cgaaaacaaa
      121 catacacacc aacaacagaa acaaccctta accataagtg agccttcacc tttactccct
      181 gaaacgaaac gtgtaaacaa aaaaagtaga gaaaggcaca gcaagatcta tacagctcaa
      241 ggttttagag gtaggagaat gaggttatcg cttcatattg ctcgaaagtt tttcgatctt
      301 caagatttgt tagggtttga caaagcaagt aagactattg aatggctttt ttgcaagtcc
      361 aataaagcca tcaaagaggt tactcaaaac ttcaatccag aacaaactaa ttacccaagt
      421 tcaagtgaag agatcaagga tgagattaaa gttgctacaa acaaattacc gaataactcg
      481 gaatcgagga agcaaattcg gaacaattat ttgataaaag agacaaggga tcaagcgaga
      541 gcaagagcgc gggacagaac taagaaaaga ctaatgaaca aggagcttga gaaatcaaat
      601 caatgtttta gaggaaaccc taaagatgaa tttcaaaaat tagggttatt agggtactta
      661 gtgagcccta ataatcagaa tattttagag gaattagggt acattaatag tccatctgat
      721 caaccattac aacaacaatc atcaacatca tcatcatcaa gtttctcctt taaacaatat
      781 tctagtacta atcatttact tcaagatcac ctgcaatcag ctatcattga tgctaatagt
      841 tttggagaat gggatactaa cagttttata actgattact tcaactatgg agttatgcag
      901 ccaaacattg gtggtcatat gacagctggt ggaatttatg aacaagaccc cagctcatta
      961 ttcatgtcca ccaccaacat tagtcaaaat caagggaagt aa
//
LOCUS       XM_071831182            2592 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840942), mRNA.
ACCESSION   XM_071831182
VERSION     XM_071831182.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 45% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2592
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2592
                     /gene="LOC139840942"
                     /note="uncharacterized LOC139840942; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840942"
     CDS             1..2592
                     /gene="LOC139840942"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687283.1"
                     /db_xref="GeneID:139840942"
                     /translation="MHTVRYKPPLSLSYNHSSYLFEDTFERNPLLITSTISSKCCCCC
                     YYYDNISVYNRLGEVNPSYLSKGFSQSTLIKWSNSKRFYGFLPFSNLNRSSYNEKFGA
                     FKEIKKHKQRGFWYDREKQFLSSMSDDYANDVEVMISLLTNEMDLEYVDVKDRKKISK
                     EKKKVGSEVVKRDFKRHKGEKIPALTKSENLDLSRDSSSGEELEVKYDSYVNDVEVML
                     SLLTNEMDLESADVKDRKKINKERKKVGSRVVKGDFKRDKVEKIQALSKSENLDLTKG
                     ENFEVKCDGYVGKTSSSQYIKDSQKDCKTCNDKEFVQEKDEVLEKKDVVKAVYEESVG
                     VRQDWRKKSEKKLNEEFCQHEPNIVIDPCRHYNYEVEKVSDESGSRTKYKRFEEMSNN
                     DKSVIESKKKLIMDMETSKMHEPDMRGTYSLSESRIKSLKEKSTEVNDQIKKDNVEDI
                     DTISDMKVAEVVGGSRSSSGSGPKGPSDEMWHVTDTSTQDPYETDTPDNVSDLSEHGE
                     PVKTSGRSLWTVIGDVVRLHWKSPMSGSHTPNSGDAKGSSYMSASSETWFTSHDSNDE
                     NKKKKSIKGASSPYNNVGPSRSSSLTIIKESSPKIKRTSEVEETYKSVNDSMNGELKK
                     RKVVHKAEEICKDNFDEWEKAYNFEANQRKIDEMFMKEALLEAKKAADVWEVPVGAVL
                     VKDGQIITRGHNLVEELRDSTAHAELICIRKASTNLQTWRLLDTTLYVTLEPCPMCAG
                     AILQARIDRVVWGAPNKLLGADGSWIRLLSDSNGASGSMETDMPPAPAHPFHPHISVT
                     RGVLAVECAEVMQNFFRLRRSKKTGPTPAPEPLTPPSVTISHHDNPHHSNFLSKIHDA
                     FKIIFCL"
     misc_feature    1966..2445
                     /gene="LOC139840942"
                     /note="tRNA(Arg) A34 adenosine deaminase TadA
                     [Translation, ribosomal structure and biogenesis]; Region:
                     TadA; COG0590"
                     /db_xref="CDD:440355"
ORIGIN      
        1 atgcacactg ttaggtataa accaccatta tctttatcat acaatcattc ttcatacttg
       61 tttgaggata catttgaaag aaatccatta ttaattacct caacaataag ctccaaatgt
      121 tgttgttgct gttattatta tgataatatt tcagtgtata atagattggg tgaggtaaac
      181 cctagctatt taagtaaagg gtttagtcag tcaaccttaa ttaagtggtc taacagtaaa
      241 agattttatg ggtttttgcc tttttcaaat ctcaatagaa gtagttacaa tgaaaagttt
      301 ggtgctttta aggaaataaa gaaacataag caaaggggct tttggtatga tagggaaaag
      361 cagtttttga gtagtatgag tgatgattat gctaatgatg tggaagttat gattagttta
      421 ttaactaatg aaatggattt ggagtatgtt gatgtaaagg atagaaaaaa gattagtaaa
      481 gaaaagaaaa aagtaggttc tgaggttgtg aaaagggact ttaagcgcca taaaggtgaa
      541 aagattccgg ctttgacgaa aagtgagaat cttgatttga gtagagatag ttcttctggt
      601 gaagaattag aggtcaaata tgatagttat gttaatgatg tggaagttat gcttagttta
      661 ttgactaatg aaatggattt ggagtctgct gatgttaagg atagaaaaaa gatcaataaa
      721 gaaaggaaaa aagtaggttc tagggttgtg aaaggggatt ttaaacgcga taaagtcgaa
      781 aagatccaag ctttatcaaa gagtgagaat cttgatttaa caaaaggcga aaattttgag
      841 gtcaaatgtg atggttatgt gggcaaaaca tcttcaagcc agtatataaa agattcgcaa
      901 aaagattgta aaacttgtaa tgacaaagaa tttgtgcaag aaaaagatga agtgttggag
      961 aaaaaggatg ttgtaaaggc agtttatgaa gaatcggttg gtgtacgcca agattggaga
     1021 aagaaatcag aaaagaagct gaatgaagag ttttgccaac atgaacctaa cattgttatt
     1081 gacccgtgta ggcattataa ttatgaggtt gaaaaagtaa gtgatgaatc gggttcaaga
     1141 acgaaatata aacgatttga agaaatgtca aacaatgata aaagtgttat tgaatcaaaa
     1201 aagaagttaa taatggatat ggaaacgtcg aaaatgcatg aacctgacat gagaggtacc
     1261 tattcattgt ctgaaagtag aatcaagagc ttaaaagaaa agtcaacaga agtcaatgat
     1321 cagattaaaa aagacaatgt agaagatatt gatacgattt cggatatgaa agtagctgaa
     1381 gtggttggtg gctcgagaag ctcatctggg tctggaccga agggaccatc tgacgagatg
     1441 tggcacgtga ctgacacatc tactcaagac ccgtatgaaa cggacacacc agacaacgtg
     1501 tctgatttaa gtgaacatgg tgaaccggtc aagactagtg gcaggtcctt gtggaccgtt
     1561 ataggtgacg tggttcggtt gcactggaaa tctccgatgt ctgggtccca cactccaaac
     1621 tctggtgatg caaagggttc atcttatatg tctgctagta gcgaaacatg gtttactagt
     1681 cacgattcga atgatgagaa caagaaaaag aaaagtataa aaggcgccag ttcaccgtat
     1741 aataatgtgg gaccttctcg aagcagttcg ttaactataa ttaaagaatc atctccaaaa
     1801 atcaagagaa cttcagaggt tgaggaaacc tataaatcgg tgaatgattc gatgaatgga
     1861 gagctaaaaa agaggaaagt tgtacataaa gctgaagaaa tatgtaaaga taactttgat
     1921 gaatgggaaa aagcgtataa ttttgaagcg aatcagcgaa aaattgatga aatgtttatg
     1981 aaggaagcac ttttggaagc taaaaaagct gctgatgtgt gggaggtgcc tgtaggagct
     2041 gttcttgtga aggatggtca aataataact cgcggtcata atctggtaga agaattacgg
     2101 gactcaactg cgcacgctga gttgatttgt attcgtaagg cctcaaccaa tttacaaaca
     2161 tggagacttt tggatactac tctttatgta acacttgaac catgtccaat gtgtgctgga
     2221 gctattcttc aagccagaat cgacagggtt gtatggggtg ccccgaataa gctgttaggc
     2281 gcagatggca gttggatcag actgttatct gatagtaatg gcgcaagtgg ttcgatggag
     2341 acagacatgc cgcctgcacc tgcacatccg ttccacccac acatttcggt aacgagagga
     2401 gtgttggcgg ttgaatgtgc tgaagttatg cagaactttt tccggctaag aagaagcaag
     2461 aaaacgggac ccacacccgc accagagccg ctaactcctc catctgttac catttcacat
     2521 catgataatc ctcatcattc caacttctta tctaagattc atgatgcctt caagatcatt
     2581 ttttgtttat ag
//
LOCUS       XM_071831184            1014 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840943), mRNA.
ACCESSION   XM_071831184
VERSION     XM_071831184.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1014
                     /gene="LOC139840943"
                     /note="uncharacterized LOC139840943; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840943"
     CDS             1..1014
                     /gene="LOC139840943"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687285.1"
                     /db_xref="GeneID:139840943"
                     /translation="MKVLSLNVRGFAVKGKFGWVRNICARENPWVAAFLETKCAKVDD
                     RWVNALWGGDNFGYVQKEVIGKSGGLLVIWDSSVFDIIDCVGGINFLAIRGKWVSSGM
                     ESIIVNVYGPHSDRDKKVFWESLENLVGSINTSWLLVGDFNEVRSSDDRLNSQFHQYR
                     ADRFNEFITINALIDIDINGRKYTGISDDGLKFSKIDRFLVNNSFLRLWEDLSVNALD
                     RHLSDHCPLVLRDKLIDYGPKPFKVFDEWLNCEGIDKIILDAWGQPIRGSRKDYIFRD
                     KLKNVKFALKEWSIKEFGGLDLEIYALKREAMEWELNDESNVITDSDRERWLECRRRW
                     VEK"
     misc_feature    7..690
                     /gene="LOC139840943"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,106..108,328..330,421..423,427..429,589..591,
                     667..672)
                     /gene="LOC139840943"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(106..108,667..669)
                     /gene="LOC139840943"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(328..330,427..429,670..672)
                     /gene="LOC139840943"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaaggtcc tttctttgaa cgttcgaggt ttcgcggtta aaggcaaatt cgggtgggtt
       61 agaaatattt gtgctagaga gaatccttgg gttgcggctt tcctggaaac taaatgtgct
      121 aaggttgatg atagatgggt aaatgctcta tggggtgggg ataactttgg ttatgtccaa
      181 aaagaagtga ttggtaaatc gggtggcctt ttagttattt gggattctag tgtcttcgat
      241 attatcgatt gtgttggggg tataaacttc ttggccatta gaggtaaatg ggtgagttca
      301 ggaatggagt ccattattgt caatgtttat ggccctcata gtgatcggga taaaaaagta
      361 ttttgggagt ctcttgaaaa tcttgttggt agtattaata cttcttggct tcttgttgga
      421 gacttcaatg aggttagaag ttcggatgat cgtcttaatt cacaatttca tcaatatagg
      481 gcggataggt tcaacgagtt cattacaata aatgctttaa ttgatataga tatcaatgga
      541 aggaaataca ctgggattag cgatgatggg ttgaagttta gcaagattga tagattcttg
      601 gttaataata gtttccttcg tctttgggaa gatctttcgg taaatgcact agatagacat
      661 ctttcggatc attgtccttt ggtgttaaga gataagttga ttgattacgg gccaaaacct
      721 ttcaaagtct ttgacgaatg gttaaattgc gaagggatag acaagattat attggatgct
      781 tggggtcaac ctattcgggg atcgagaaaa gattatatct ttagggataa acttaaaaat
      841 gtgaagttcg cgctaaaaga atggagtatt aaagaatttg ggggactaga tttagaaatt
      901 tatgccctta aaagagaagc aatggagtgg gagttaaacg atgaatcaaa tgttatcacg
      961 gattcggatc gggaaaggtg gttggagtgt agacgacgtt gggttgagaa gtaa
//
LOCUS       XM_071831185            1017 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840944), mRNA.
ACCESSION   XM_071831185
VERSION     XM_071831185.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1017
                     /gene="LOC139840944"
                     /note="uncharacterized LOC139840944; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840944"
     CDS             1..1017
                     /gene="LOC139840944"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687286.1"
                     /db_xref="GeneID:139840944"
                     /translation="MPKEILATEAVCKDFDPPVPMSKYGNREKSKFCDFHDDYGHETN
                     ECRHLIEKVVAELKKGRLQHLKKGGKASRTVRAKLIALSTALSGFSSESAWPIGIFEL
                     ELELVDNDNKELVRGTTVEFAVVRSYSKYNALLGRTTLQRLAAIPSTVHGLIKFPTPL
                     GIEIIRSEKQDASVVAVEHAEKQPSEEEQIGGGLSDETKFKLRNILASNTDVFAWKEA
                     DMTRVPREIAEHRLNVNPSLTPIRQKKRGMAPEKSEWLKAEVDKLVKANILREVRWLR
                     SADDEDKAAFHTSQGIYCYIKMSFGLKNTRATYQRVIDEAFKSQIRRNLEAYVDDVVI
                     KSTT"
     misc_feature    <835..>1014
                     /gene="LOC139840944"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    901..903
                     /gene="LOC139840944"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238185"
ORIGIN      
        1 atgccaaaag aaattttggc tacagaggca gtgtgcaaag atttcgatcc cccggtccct
       61 atgtcaaaat atgggaatag ggaaaaaagc aagttttgtg actttcatga cgactacggt
      121 catgaaacaa atgaatgtcg gcatctaatc gaaaaagtag ttgccgaact taaaaaagga
      181 agactgcaac acttgaaaaa aggcggaaaa gcatcaagaa cagttcgggc taagttaata
      241 gctctcagca ccgcattgtc aggtttttct agcgaatccg catggccgat tgggatcttc
      301 gagctagaat tagagttagt agataatgat aataaggaat tagtaagagg tacgacagta
      361 gagtttgctg tagtacgatc ttactcaaaa tataacgcac tcttgggacg cacaacatta
      421 cagcggttgg cggcgatccc ttccacagtg cacggtctca taaaattccc aactccatta
      481 gggatcgaga taataaggtc agaaaagcag gatgcaagtg tagtggctgt agaacatgca
      541 gagaaacagc caagcgaaga agaacagatc ggtggaggat tatctgatga aacaaagttt
      601 aagcttcgta acatattagc ttccaatacg gatgttttcg catggaaaga agcggatatg
      661 accagggtac cgagagaaat agctgagcat aggcttaatg taaatccaag tttaacgcct
      721 atacgccaaa agaaacgcgg tatggcacca gagaaaagtg aatggttaaa agcggaagtc
      781 gacaaattgg tcaaagcaaa catattacga gaagtacgat ggctgcggtc tgcggatgat
      841 gaggacaaag ctgcctttca cacaagccaa ggcatctatt gttatataaa gatgtcgttt
      901 ggtttaaaga acaccagagc aacataccaa cgcgtaatag acgaagcttt taagagtcaa
      961 attcgtagaa atttagaggc atacgtggac gacgtggtta taaaaagcac aacatag
//
LOCUS       XM_071831186            1779 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840945), mRNA.
ACCESSION   XM_071831186
VERSION     XM_071831186.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1779
                     /gene="LOC139840945"
                     /note="uncharacterized LOC139840945; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139840945"
     CDS             1..1779
                     /gene="LOC139840945"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687287.1"
                     /db_xref="GeneID:139840945"
                     /translation="MKLNPSKCSFGEEEGKFLGHIITERGIRANPKKIEAIESMLSPR
                     SKKGVQSLTGVAHDDCAYCRGNTNTLLSGIKRSNKFSIDSKQGTARRLRRYFQTHPIM
                     VLTDQPIKQVLYKPKNSSRMAKWAIELGEHEISFSPRSAVKGQVLADYLAETARDIKI
                     SHESKEIPPSPEQLWKMHTDGACSPEGTGAGIVLKSPEGEEYTFALRFSFPVTNNEAE
                     YEALLSGMRLAKYLEVKELSVYVNSQLVANQFNGIFEAHDESMQKYLKLVQELAVDFD
                     LFQITQVSRTMNKKADALSKLAALTFSHFKKEIWVEEVKVKSIDTDGVSAAVEEDEPS
                     WITPIVEFLNTGTLPIDSTEARKIKMKAPMYLLDKGILYRKSFLGPHLRCLNPTQAES
                     IIREVHEGMCALHSGHKTVASKIMRLGYYWPSMYRDAAEGWIDELPNVLWAHRTTPKG
                     VTNETPFSLVYGSEAVIPAKINVPTMHILSFDESSNSEKLRENLNLVEERGEMAAIKE
                     AINKQRITGYYNKRVQPLSFQLDNLVWQKNEASRAEDTSKLGPKWEGPYKVIGVSDTG
                     AYRLASLDGKATKRTWHAQTLKRCYI"
     misc_feature    <1..66
                     /gene="LOC139840945"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    <268..453
                     /gene="LOC139840945"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    523..897
                     /gene="LOC139840945"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(538..549,637..645,652..654,724..726,844..846,
                     886..888)
                     /gene="LOC139840945"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    1153..>1284
                     /gene="LOC139840945"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgaagctga acccgtcgaa gtgtagcttt ggagaagaag aagggaagtt tctcggtcat
       61 atcattactg aacgcggaat acgcgcaaat ccaaagaaaa tagaagctat cgaaagcatg
      121 ctgtcacctc gaagtaagaa gggtgtgcaa agtttgacgg gagttgccca cgatgactgc
      181 gcctactgca ggggaaacac taatacttta cttagcggca tcaaaagaag caataagttc
      241 agtattgata gcaaacaggg gacagctaga cgcttaagga gatatttcca aacgcatcca
      301 ataatggtcc taacggacca accaataaag caggtgctat acaaaccaaa aaattctagt
      361 cgcatggcca aatgggctat tgaattaggt gagcacgaga taagcttctc accaagaagt
      421 gcggtaaaag ggcaagtcct agcagattat ctggctgaaa cagccagaga cattaaaatc
      481 tcgcatgagt caaaagaaat accgccttca cccgaacaac tgtggaaaat gcacacagat
      541 ggggcttgta gtccagaagg cacaggggca ggaatagtcc taaaaagtcc agaaggagaa
      601 gaatacacct tcgcgctgcg ttttagcttc cctgtaacaa ataatgaagc tgagtatgaa
      661 gcactattat ctggaatgcg attagcaaaa tacttggagg taaaagagtt gtcagtatat
      721 gttaattcac agctagttgc aaatcaattc aatgggatat tcgaagcaca tgatgaatcg
      781 atgcaaaagt acctgaaact tgtgcaagaa ctcgcggtag attttgattt atttcagata
      841 acacaagttt caaggacaat gaacaaaaag gcggatgcgc tgagtaagct ggccgcctta
      901 acattcagcc atttcaagaa agaaatttgg gttgaggaag tgaaagttaa atccattgat
      961 acagatggtg tatctgccgc agttgaagaa gatgagccaa gttggataac accgatagtg
     1021 gaatttttga acactggtac attgccaata gattcaacag aggcaagaaa gataaaaatg
     1081 aaagcaccaa tgtatttgct agacaaaggc attctataca ggaagtcctt tttgggacct
     1141 catttgcggt gtcttaatcc aactcaagca gagtcaatca tacgagaagt gcacgaggga
     1201 atgtgcgctt tgcattcagg gcacaaaaca gttgcgtcca aaataatgcg gctcggatac
     1261 tattggccgt caatgtacag agatgccgcg gagggttgga tagatgagct accaaatgtg
     1321 ttgtgggcac accgcacaac cccaaaaggc gtaacaaatg aaacaccttt cagtttggtg
     1381 tacgggtccg aggcagtaat acctgcgaaa ataaatgtgc caacgatgca catattatcc
     1441 ttcgatgaaa gtagcaatag cgaaaaactg cgtgaaaatc taaatttggt tgaagagcgc
     1501 ggggaaatgg cggctataaa agaagcaatc aacaagcaaa gaatcacagg ctactataat
     1561 aaacgcgtac aaccattatc tttccagctg gataatttgg tatggcaaaa gaatgaagca
     1621 agcagggctg aggatacgag taaactcgga ccaaaatggg aaggaccata taaggttatt
     1681 ggcgtaagcg atacaggggc gtatcggtta gcaagtttag atggaaaagc aacaaaacgc
     1741 acctggcatg cacaaacact taaacggtgc tacatatga
//
LOCUS       XM_071831187            2037 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840946), mRNA.
ACCESSION   XM_071831187
VERSION     XM_071831187.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2037
                     /gene="LOC139840946"
                     /note="uncharacterized LOC139840946; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840946"
     CDS             1..2037
                     /gene="LOC139840946"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687288.1"
                     /db_xref="GeneID:139840946"
                     /translation="MGEENAITLINKLDFGDPLYLHPIGFVDGTCVKNANDEVLSKQW
                     DRCNSVVLSWLLGSIADELYAGLIFSENASTVWTEQKETYDKIDGSIIFNLHFNISTL
                     KQGNSSMSEYYHKLNSLWKQYDAMANLKQCTCEVADQTVKHNSMLKLMQFLMGLNYCY
                     MHVKSNLLLRDPLPDVKTAYSMLSREESHRGLSTTDNKPQTSVFMSQVESNVSTSNNV
                     VNDNNVQRRSNQNNFSSGNNSNNFTNNRTLNSNYKCTKCNKIGHTIDRCYKIVGYPPG
                     WKEKIYVNKFNSKNAANHSSVSDSSGSGSGNNNLTNEQMMKLLSLINEKSGPEIATEN
                     IAGTVLSNSKKFNENFHKIFNPKTNLSKTENKGWIIDFGASQHMSESDNGLNNIIDVS
                     HLNFSTHVWDLRLGIIVGTGDVFDGLYVFNVSSHENDNTYLSANKCYLSNNLWHNRLG
                     HPSENVLKKLKGKIDLSNKDINCEPCDVCHKAKQTRETFNDSDHKSVAVGDLVHINLW
                     GPFRVQSREGFKYFLTIIDDYSRAVWTYLIKSKDEVFSHIKSFVFFLETQFESKVKII
                     RPDNGTEFVNNQMDDFIKDKGILHQTSCVYTPQQNGIVERKHRHLLNVSRALMFQGGL
                     PLNMWSDCILTTCYLINRTPSSILSGCSPYELLFKKSPKICGVVVCVMLLIKTC"
     misc_feature    1249..1452
                     /gene="LOC139840946"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1486..1794
                     /gene="LOC139840946"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgggggaag aaaacgcgat tactcttata aataagcttg actttggtga ccctttgtat
       61 ttgcacccta ttggttttgt ggatggtact tgtgttaaaa atgctaatga tgaagttttg
      121 tctaagcaat gggatagatg taattctgta gttctttcat ggttacttgg ttctattgct
      181 gatgagttgt atgctggttt aatcttctct gaaaatgcta gcactgtgtg gactgaacaa
      241 aaggaaactt atgataaaat agatgggtct attatcttta acttacactt taatattagc
      301 acattgaaac aaggaaatag ctctatgtct gaatattatc ataagctgaa ctctctgtgg
      361 aaacaatatg atgccatggc taatctgaaa caatgtactt gtgaagttgc tgatcaaact
      421 gtcaaacata atagtatgct taagttgatg caattcttga tgggtctaaa ttattgttac
      481 atgcatgtta aaagtaatct gctattaagg gacccattac ctgatgttaa aactgcttac
      541 tctatgctat ctagagaaga gtcacataga gggttgtcca ctactgataa taaacctcaa
      601 acatctgttt tcatgtccca agttgagtca aatgtgtcaa cttcaaacaa tgttgtgaat
      661 gataacaatg ttcaaagaag gtcaaaccaa aataattttt ccagtgggaa taactcaaac
      721 aacttcacta ataacaggac tctcaactct aattacaagt gcacaaagtg caacaaaatt
      781 gggcatacta ttgacagatg ttataaaatt gtgggatatc cacctgggtg gaaagaaaag
      841 atctatgtga acaaattcaa tagtaaaaat gctgctaatc atagctctgt gagtgatagt
      901 tctgggtcag gatctggaaa taacaatttg acaaatgaac aaatgatgaa gttgttgagt
      961 ctaattaatg agaagtctgg tcctgagatt gcaactgaga atattgcagg tactgtttta
     1021 agcaatagca aaaaatttaa tgagaatttt cacaaaattt tcaaccctaa aactaatctt
     1081 tcaaaaactg agaataaggg ttggattatt gattttggtg cctctcaaca catgtctgag
     1141 tctgataatg ggttgaataa tattattgat gtctctcatt taaacttctc aacacatgtc
     1201 tgggacttga ggctagggat aattgtaggg actggtgatg tttttgatgg tctctatgtg
     1261 tttaatgtaa gtagtcatga aaatgataat acctatttat ctgctaataa atgctacttg
     1321 tccaacaact tatggcataa cagacttggt catccttctg aaaatgtttt aaagaaactt
     1381 aaaggaaaaa ttgacctttc aaataaggac attaactgtg aaccttgtga tgtttgtcac
     1441 aaggcaaagc aaactagaga aacttttaat gatagtgacc ataagtctgt tgctgtgggt
     1501 gaccttgttc acattaacct ttggggacca tttagggttc aaagcaggga agggttcaaa
     1561 tatttcttaa ctattattga tgactattca agggctgtct ggacatactt aatcaaatct
     1621 aaagatgaag ttttcagtca cataaagtct tttgtcttct ttcttgaaac acaatttgag
     1681 tcaaaagtca aaatcataag gcctgataat gggactgagt ttgttaataa tcaaatggat
     1741 gactttatta aagacaaagg gattttacat caaacatcat gtgtctatac tccccaacag
     1801 aatgggattg tggagagaaa acacagacat cttttaaatg tgtccagagc ccttatgttc
     1861 cagggtggtt tacccttaaa tatgtggagt gattgtatat tgactacttg ctacttgata
     1921 aacaggacac catcttccat tctctctggc tgctctcctt atgaactttt gtttaaaaaa
     1981 tctcctaaaa tatgtggagt ggttgtctgt gttatgctac ttattaaaac atgttga
//
LOCUS       XM_071831188            1155 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840947), mRNA.
ACCESSION   XM_071831188
VERSION     XM_071831188.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139840947"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840947"
     CDS             1..1155
                     /gene="LOC139840947"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687289.1"
                     /db_xref="GeneID:139840947"
                     /translation="MHFKLNALIENGFTQSVSDNSLYVKDSGDTFIALLVYVDDIVIT
                     GNSNGEIDKVKQFLKTKFQIKDLRELKYFLGIEVLKNEKGMCISQRKYCLDLLDEYGL
                     LGCKPASTPIKPNLSVLSEPSEKDPLLTNLTEYQQLVGKLIYLTLTRPDISFSVQVLS
                     QFMHAPLQSHFNLALRVLRYLKGSPGKGVQFVKSNNWSLNAYCDADYGKCKVDRKSVT
                     GYLVYFCGSLVSWKSKKQATTVRSSTEAEYRAMASTACEIVWVKNLLQELGVNVDLPV
                     DLFCDNNSAIKLAANPIFHDRTKHFEIDVHYIRQKVSSGLIKTVKVKSESQLVDILTK
                     GVSVTQHGYLASKLGLISKMSLWGDVKFITLSNSFLVFSCSHCILLLIFV"
     misc_feature    <22..336
                     /gene="LOC139840947"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    601..1011
                     /gene="LOC139840947"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(610..621,724..732,739..741,841..843,919..921,
                     1000..1002)
                     /gene="LOC139840947"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcacttca aacttaatgc tcttattgaa aatggcttta ctcaaagtgt gtctgataat
       61 tctttgtatg tcaaggatag tggtgatact ttcattgcct tacttgtata tgtggatgat
      121 attgttatca ctggtaatag taatggtgaa attgataagg tgaaacaatt tttgaaaact
      181 aaatttcaaa tcaaagattt acgagaactc aaatactttc ttggaattga agttttgaaa
      241 aatgaaaaag gtatgtgcat ttcacaaaga aaatactgcc ttgatcttct tgatgagtat
      301 ggtcttctgg gctgcaaacc tgctagcact cccattaaac ctaatctaag tgttttaagt
      361 gaaccaagtg aaaaggatcc cttgttgacc aacttaactg agtatcaaca gcttgttgga
      421 aagctcattt acctaactct taccagacct gatatatcct tttctgtgca agttcttagt
      481 cagtttatgc atgctcctct acagtctcac tttaatcttg ccttgagagt cctgagatac
      541 ctaaagggct ctcctggtaa gggtgttcaa tttgttaaaa gcaataactg gtctttaaat
      601 gcctattgtg atgctgacta tggtaagtgt aaggttgata gaaaatctgt gactggatac
      661 ttggtttatt tttgtggatc cttagtatct tggaagagta aaaaacaagc tacaactgtc
      721 aggtcctcca ctgaggctga atatagggcc atggcaagca cagcttgtga aattgtttgg
      781 gtcaaaaacc tcttacaaga acttggggtt aatgttgact taccagttga cctgttttgt
      841 gataataatt cagctattaa gttggctgct aatcctattt ttcatgatag aactaaacat
      901 tttgaaattg atgtgcatta tattagacaa aaggtttcaa gtggtttaat caaaactgtc
      961 aaagtcaaat ctgaaagtca actggttgac attttaacca aaggggttag tgtgacccaa
     1021 catggctact tggctagcaa acttggactt atatcaaaaa tgagtttgtg gggggatgtt
     1081 aaatttatca ctttatcaaa ctcctttttg gtcttttctt gttctcattg tattttgctc
     1141 ttgatctttg tgtag
//
LOCUS       XM_071831189             321 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable calcium-binding
            protein CML16 (LOC139840949), mRNA.
ACCESSION   XM_071831189
VERSION     XM_071831189.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..321
                     /gene="LOC139840949"
                     /note="probable calcium-binding protein CML16; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139840949"
     CDS             1..321
                     /gene="LOC139840949"
                     /codon_start=1
                     /product="probable calcium-binding protein CML16"
                     /protein_id="XP_071687290.1"
                     /db_xref="GeneID:139840949"
                     /translation="MYANGNRSIDFKELLNAILLDYINEVFNNDDQLMKMFCMFNKDG
                     DGFITPVELASQMVKMGHPLTSRELIDLVHDIDTNGDGINRFHEFTAVLGMAISEFFE
                     IKAS"
     misc_feature    <7..279
                     /gene="LOC139840949"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
ORIGIN      
        1 atgtatgcta atggaaacag atctattgat tttaaagaat tgttgaatgc catcttgctt
       61 gattacatca atgaggtttt caacaatgat gaccaactca tgaagatgtt ttgcatgttc
      121 aacaaagatg gtgatggttt catcacccct gtcgaactgg ctagccaaat ggttaaaatg
      181 ggtcacccat tgacctctcg tgaacttatt gatctcgtgc atgatatcga cacaaatggt
      241 gatggcatca atagatttca tgaatttaca gcggttttag gcatggccat atcagaattc
      301 tttgaaataa aagcgtccta a
//
LOCUS       XM_071831190            1570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            phosphatase PP1 isozyme 2-like (LOC139840950), mRNA.
ACCESSION   XM_071831190
VERSION     XM_071831190.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1570
                     /gene="LOC139840950"
                     /note="serine/threonine-protein phosphatase PP1 isozyme
                     2-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 68 Proteins"
                     /db_xref="GeneID:139840950"
     CDS             293..1222
                     /gene="LOC139840950"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase PP1 isozyme
                     2-like"
                     /protein_id="XP_071687291.1"
                     /db_xref="GeneID:139840950"
                     /translation="MAQNGQGIEPALLDDIINRLLEFRLERTVRQVQLSESEIRQLCT
                     VSREIFLQQPNLLELEAPIKLCGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGK
                     QSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCF
                     NCLPAAALIDGKILCMHGGLSPDLTNLDQIRNLSRPTDVPDSGLLCDLLWSDPSRDVK
                     GWGMSDRGVSYTFGAEKVAEFLMQHDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNY
                     CGEFDNAGAMMSVDESLMCSFQILKPARKPRFL"
     misc_feature    329..1198
                     /gene="LOC139840950"
                     /note="PP1, PPKL (PP1 and kelch-like) enzymes, and related
                     proteins, metallophosphatase domain; Region: MPP_PP1_PPKL;
                     cd07414"
                     /db_xref="CDD:277359"
     misc_feature    order(494..496,500..502,578..580,590..592,674..679,
                     689..694,704..706,821..823,887..895,920..922,962..970,
                     1046..1048,1118..1132)
                     /gene="LOC139840950"
                     /note="active site"
                     /db_xref="CDD:277359"
     misc_feature    order(494..496,500..502,578..580,674..676,821..823,
                     1046..1048)
                     /gene="LOC139840950"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:277359"
     misc_feature    order(590..592,689..694,704..706,887..895,920..922,
                     962..970,1118..1132)
                     /gene="LOC139840950"
                     /note="natural toxin binding site [chemical binding];
                     other site"
                     /db_xref="CDD:277359"
     misc_feature    order(839..841,845..847,896..898,911..913,950..952,
                     977..979,1001..1006,1010..1018,1022..1030,1073..1075,
                     1085..1087,1166..1171,1175..1177,1181..1183,1187..1189)
                     /gene="LOC139840950"
                     /note="MYPT1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:277359"
ORIGIN      
        1 tttaatcaga agaatataga atatcaattt ttcacaatat caacatcacc gccagtgata
       61 catcgttagc cccccatcgg agttgcagtt tattttcttt ttctttctta caaatgtagc
      121 tttttgttat taaatccatt ttatcttcat tatatttaaa tttatcattt tattaacata
      181 ttcatcgatt attggaacac atttgtgcta tatcggttaa tttatacgtc attgagaaac
      241 tactggttct ttcagatatt ttaaacctag attttgggga tttttatcat agatggctca
      301 aaatggtcag gggattgagc cggcgttact tgatgatata attaaccggt tattggagtt
      361 ccggctggag cgaaccgtcc ggcaggttca gctatcggaa tcggagatcc ggcaactttg
      421 taccgtttca cgtgaaattt tccttcaaca acctaatttg ttagagcttg aagctccgat
      481 taagctatgc ggtgacattc atgggcaata tggtgatttg ttgaggcttt ttgaatacgg
      541 agggtttcct cccgaagcaa attatctgtt tttaggtgac tatgtggatc ggggcaaaca
      601 aagtctcgag acaatatgct tactgcttgc ctacaaaatt aaatatcccg aaaacttctt
      661 ccttttgaga ggaaaccacg aatgtgcttc tatcaaccgg atatacggtt tctatgatga
      721 atgtaaacgt cgatttaacg ttagactttg gaaaacattt accgattgct tcaactgtct
      781 tccagctgct gctttaatcg atggcaaaat tctttgcatg cacgggggtt tgtctcctga
      841 tctaacaaat ttagatcaga taagaaattt gtctcgtcct actgatgttc ccgactcggg
      901 tttgctttgc gatttgcttt ggtctgatcc tagtcgagat gtgaaaggct ggggaatgag
      961 tgatcgtggg gtgtcgtata cgtttggtgc tgaaaaggtg gctgagtttt tgatgcagca
     1021 tgatatggat ctcgtgtgcc gtgcccatca ggttgttgaa gatgggtatg aattctttgc
     1081 cgataggcag cttgttacga tattctcggc accaaattat tgtggtgaat ttgataatgc
     1141 aggtgcaatg atgagtgttg atgaaagctt aatgtgttct ttccaaattc tgaaaccagc
     1201 taggaaacca aggtttttat gaagaattgg tgacccagaa gcttataaga aaccctcaaa
     1261 tgctgccctc cctaaaatga ttgtgatgta gcacactgct gttttaattt tctgtcagaa
     1321 acactgttca ttcaagtctt gcttctgctg ctgctgctgc tttaagatgg tagtttcatg
     1381 ctgctatgga agattggtgg acggcttctt taaattcaga tgatcaactg tcaaattttt
     1441 taaaattatg tttgtatccc aatttacaac aaggtaaaat tacattcagt gttattaatt
     1501 gtgataacac catggttggt ggttgttcac acattaagat tcctaatcaa caattctaat
     1561 tgaccccgtt
//
LOCUS       XM_071831192             426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840951), mRNA.
ACCESSION   XM_071831192
VERSION     XM_071831192.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..426
                     /gene="LOC139840951"
                     /note="uncharacterized LOC139840951; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840951"
     CDS             1..426
                     /gene="LOC139840951"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687293.1"
                     /db_xref="GeneID:139840951"
                     /translation="MVMPGLYLCLEINVMLCFDCGANRPFVSTTFCAKLNVPVSVINE
                     PLSVEVGDGRTIPVAKCVSEITIDIEGSLFLVTCLVMPIPSSDAVLGMNWLSDHKATY
                     VIDVNKEEKVVSDISVVSEYPEVFPEESSGLPSIREVNI"
     misc_feature    31..285
                     /gene="LOC139840951"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(55..57,61..63,67..69,142..150,265..267)
                     /gene="LOC139840951"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    55..63
                     /gene="LOC139840951"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    55..57
                     /gene="LOC139840951"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(142..153,163..174)
                     /gene="LOC139840951"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggtgatgc ctggactata tttgtgtcta gagattaatg tgatgttgtg ctttgactgt
       61 ggagcaaatc gcccgtttgt gtcaactaca ttttgtgcta agttaaatgt gcctgttagt
      121 gtaataaatg aacccttaag tgtcgaagtg ggtgacggta ggactattcc agtcgcaaag
      181 tgtgtgtctg aaattactat tgacatagag ggtagtcttt tccttgtgac ttgtctagtg
      241 atgcctatac caagctctga tgcagtgtta ggcatgaact ggcttagtga ccataaggcc
      301 acttatgtga tcgatgtaaa taaggaagag aaggtagtgt ctgatatttc tgtagtgtct
      361 gaatatccag aagtgttccc cgaggaatcg tcaggcttac catcgatcag ggaagttaat
      421 atatga
//
LOCUS       XM_071831193             855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840952), mRNA.
ACCESSION   XM_071831193
VERSION     XM_071831193.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..855
                     /gene="LOC139840952"
                     /note="uncharacterized LOC139840952; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840952"
     CDS             1..855
                     /gene="LOC139840952"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687294.1"
                     /db_xref="GeneID:139840952"
                     /translation="MTIYETSDLVKLNQTFENKEDFLMQLRTKCGTEGFQIKPKYSDK
                     SRYTATCISPNCSWQITARCIQDSNNFQVRKLNDLHTCSNTQILPNNKHATKKVLGNI
                     LKEVMKQEGRVYRPNDIRTDMSARFKISLSYHQAWKAKCYAIEMLRGSLEDSFQILPN
                     YLYNLRLSNPVIIVDGAHLKSHYLGTNLIAVAMDANNGILPLAYGIGAGETTNHWTWF
                     YGNLRDSLQSSGCCIVNLTIISDRAPAIAAGISNVFPEVFHALCARHLLGNLKSVSKR
                     VKSYEWHY"
     misc_feature    22..219
                     /gene="LOC139840952"
                     /note="MuDR family transposase; Region: DBD_Tnp_Mut;
                     pfam03108"
                     /db_xref="CDD:427142"
     misc_feature    511..807
                     /gene="LOC139840952"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgacaatat atgaaacctc ggatctagtt aaattgaatc agactttcga aaacaaggaa
       61 gattttctta tgcaattacg tacaaagtgt ggtactgaag ggttccagat aaaaccaaag
      121 tactcagaca agtcaaggta tacagctaca tgcatatcac caaattgttc atggcaaatt
      181 actgctaggt gtatacaaga tagcaacaac tttcaagtac ggaagttgaa tgatctacac
      241 acgtgctcaa atacccaaat tcttccgaac aataagcatg ccaccaagaa ggtcctaggg
      301 aatatactga aagaggtgat gaaacaagaa ggtcgtgtct atcgaccgaa tgatataagg
      361 actgatatgt cggcgcgatt taaaataagt ctatcatacc accaagcatg gaaagccaaa
      421 tgttacgcaa ttgagatgtt gaggggtagt cttgaagatt cctttcaaat actacctaat
      481 tatctatata atcttagatt gtctaaccca gtaatcatag tcgatggggc tcatttaaaa
      541 agtcattact tggggactaa cttgattgct gtcgctatgg atgctaacaa tggaatcctt
      601 ccattagcct acggtattgg agcaggagag accaccaatc attggacatg gttttatggt
      661 aatctaagag actctctaca gtcttcggga tgttgtattg ttaatcttac cattatatct
      721 gatagggcac ctgcaatagc tgctggcata tcaaacgtat ttccagaagt atttcatgca
      781 ctatgtgcta gacatttgtt gggaaacctc aaaagtgtgt ctaaaagggt taaaagttac
      841 gagtggcact actag
//
LOCUS       XM_071831194             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides basic leucine zipper 43-like
            (LOC139840953), mRNA.
ACCESSION   XM_071831194
VERSION     XM_071831194.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139840953"
                     /note="basic leucine zipper 43-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840953"
     CDS             1..603
                     /gene="LOC139840953"
                     /codon_start=1
                     /product="basic leucine zipper 43-like"
                     /protein_id="XP_071687295.1"
                     /db_xref="GeneID:139840953"
                     /translation="MMQETYYLHQGNEYFPSNIIAIQSNISCSIDFETTIMPYNHHQP
                     QLSNNSSTSDEPNDQGCISIINERKYRRMVSNRESARRSRLRKQRQLEELCSQVKRLV
                     NENHGLLVKVNQLSESHERIIEENRKLKNERLELRKLLSDAQLDNTYTTLGDLADDGD
                     HVDGGDGRSSWKGDDGGERNFTMVVVEVDISCRSLIILLN"
     misc_feature    205..357
                     /gene="LOC139840953"
                     /note="Basic leucine zipper (bZIP) domain of Plant G-box
                     binding factor 1 (GBF1)-like transcription factors: a
                     DNA-binding and dimerization domain; Region:
                     bZIP_plant_GBF1; cd14702"
                     /db_xref="CDD:269850"
     misc_feature    205..357
                     /gene="LOC139840953"
                     /note="coiled coil [structural motif]; Region: coiled
                     coil"
                     /db_xref="CDD:269850"
     misc_feature    order(214..219,223..231,235..252,256..264)
                     /gene="LOC139840953"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269850"
     misc_feature    order(259..261,268..273,280..285,289..294,301..306,
                     310..315,322..327,331..336,343..348,352..357)
                     /gene="LOC139840953"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:269850"
ORIGIN      
        1 atgatgcaag aaacatatta cttacatcaa ggaaatgaat attttccttc aaacattatt
       61 gcaatccaat ccaacatttc ttgtagtatc gactttgaaa caaccattat gccgtataac
      121 catcatcaac ctcaattatc aaacaactcg agtacttctg atgaacctaa tgatcaaggc
      181 tgcataagca tcatcaatga gagaaagtat aggcggatgg tgtcaaaccg ggagtccgct
      241 aggaggtcaa ggttaaggaa acaaagacag cttgaggaac tttgttccca agtgaagcgg
      301 ctcgtgaacg agaaccatgg gctcttggta aaagttaacc agctctccga gtcccatgaa
      361 cgaattattg aagaaaatcg taagttaaag aatgaaaggt tggagctaag gaaattgctt
      421 agtgatgctc aacttgataa cacatatact actttaggag atcttgctga tgatggtgat
      481 catgttgatg gtggtgatgg acggagttcg tggaagggcg atgatggcgg tgaacggaat
      541 ttcacgatgg tggtggtgga ggtcgatatt agttgtagat ctctcatcat tttgcttaac
      601 taa
//
LOCUS       XM_071831195            1245 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840954), mRNA.
ACCESSION   XM_071831195
VERSION     XM_071831195.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1245
                     /gene="LOC139840954"
                     /note="uncharacterized LOC139840954; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840954"
     CDS             1..1245
                     /gene="LOC139840954"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687296.1"
                     /db_xref="GeneID:139840954"
                     /translation="MDVNLITVATSIQAIQCQIVGVHSALNCFISFIYAANHYSQRRV
                     LWRELDMHKGFVCDNPWVVMGDVNASLSIDDTSSGSSKSTIAMSEFKECVDNIQVTDI
                     NHSDFKYTWNQRPKSDTGILKKIDRVEGHHMSAVVKRMRSLKKRLRVLAWEKGNLHTN
                     VVELRGNLNKAQLHLDKNPHDVQARERVSNVLKQFNESVLEEQRFLKQKENFEWLRVG
                     DNNSSYFYKTVKGRINRSRVNSIRNQDDIWMEGEDVARTFVDHYKQFLGQEKQCNNIR
                     NVDQLFTNHLSREQADHMIRQVSDQEVKNAMFDIGDNKSPGPDGYSSVFFKEAWDIVG
                     EDVTKAVKQFFTNDQLLMEINHTILSLLLKVQSTSKINDYRPISCCNTIYKCISKVIV
                     NRISGCLKDIVGENQSAFISGR"
     misc_feature    1066..>1242
                     /gene="LOC139840954"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggatgtaa atctcattac agtagctact tctatacaag caattcaatg ccaaattgtt
       61 ggtgtgcatt ctgctttaaa ttgttttatt tccttcattt atgcagctaa ccattattct
      121 caaaggaggg tgttgtggag agaattggat atgcataaag gttttgtatg cgataatcct
      181 tgggttgtca tgggggatgt caatgcatca ctgagtattg atgacacatc ttccggatca
      241 tcgaaatcta ccattgctat gagtgaattt aaggagtgtg tggataatat tcaagtcacg
      301 gatattaacc actcagactt taaatacacg tggaatcaac gccctaaatc cgatacgggt
      361 attctaaaga aaattgacag agttgaaggt catcatatgt ctgctgttgt taaacgaatg
      421 agaagcctaa aaaaacgttt gcgtgttcta gcatgggaga aaggaaactt acataccaat
      481 gtcgtcgaac tgcgtggtaa cctgaataag gctcaactcc acctggataa aaatcctcat
      541 gatgtgcaag ctagggaaag ggtaagtaat gttcttaaac aatttaatga atccgttctt
      601 gaggaacaac ggtttttgaa gcaaaaagaa aattttgaat ggcttagagt tggtgacaac
      661 aactcgagct atttttataa aactgttaaa ggaaggatta acaggagtcg tgttaattcg
      721 attcgaaacc aagatgacat atggatggaa ggggaagatg tggctcgcac ttttgtggat
      781 cactacaaac aattcttggg tcaggagaaa caatgtaata atattagaaa tgttgatcag
      841 ttgtttacca accatctttc tcgggaacag gcagatcata tgatacggca ggttagtgac
      901 caagaagtga agaatgcaat gtttgatatt ggcgataata aatcaccagg tcccgatggt
      961 tactcttcgg tatttttcaa ggaggcgtgg gatatagttg gggaagatgt aacgaaagca
     1021 gtcaaacaat ttttcacaaa tgatcagctg ctgatggaga ttaatcatac aatcttatct
     1081 ttactcctaa aagtccaatc tactagcaag attaatgatt ataggcccat atcttgttgc
     1141 aacactattt acaagtgtat aagcaaggta atcgtgaacc gtatcagtgg ttgtttaaaa
     1201 gatattgttg gtgaaaatca atctgctttc atctcgggaa gatga
//
LOCUS       XM_071831196            2568 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840955), mRNA.
ACCESSION   XM_071831196
VERSION     XM_071831196.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2568
                     /gene="LOC139840955"
                     /note="uncharacterized LOC139840955; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840955"
     CDS             1..2568
                     /gene="LOC139840955"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687297.1"
                     /db_xref="GeneID:139840955"
                     /translation="MPWLLCGDLNEVRFQSDRFNSEFNPNWAMRFNDFINNLRLIDIP
                     LGGKRFTRVCDNGIKFSKLDRFLISEDFNHLWPDLHATVLDRRNSDHAPIVLKNGHFD
                     FGPKPTKVFNEWLKIEGVDDIIEKAWIIPVQGSRPDCIMRNKLKNVKLELKKCSSIFN
                     NLEEQIMNHSKAANRWEIKAESRLLSDIERDEWMNERKQWFEKEKIHINMMKQKARVR
                     WNLEGDENSRYFHNFVKRRFSKNSIHGIQVNGVWNCNPQSIKDEVYSFFANNFRRTDF
                     EYGSFDFQCTRILDEDNRLLEAKFSEVEIWKAIQNCCSSKAPGPDGFNMKFFKKFWWL
                     LNDDIIRIFDWFWNRMEISKGCNASFITLIPKTDNPLSLTDYRPISLIGSMVWRKWIK
                     WIRACLSSATISVLVNGSPTLEFKPEKGVRQGDPISPFLFNIAAEGLNLLTKRAIECG
                     EIKGISVGRNKVTNGDGNDGGVSRGLFVVIKQRDEVDGCFVDGSSSGWTNWFMVVVSR
                     KQQSIGDDGMVDMGGFMGLCNALQLKSNECDDGLMKKQLGATTWGNIIKVDSVIDSNG
                     IDFTTSFVKEIENGHSILFWHDHWLGNCKLKEAFYRLCMLDRNKQAFVGDRIKQADDG
                     SGKLDFSWEWDRPISGRTGADLRNLESLLASVELGNQTNGAWKWNLEADGVFRTKSLS
                     LTIDKKRLQSAVANATLRNKSIPQKVGVFVWRALQKRIPVRVELDKRGIDLDSILCPL
                     CKSDIESVDHILVQCSLVKELWNQFFKWWNVDSSLAISLQLVFDDSSHLTASTNIGKV
                     IWQGANSWNTASILANVHATSFGWISKRLKKSKLIWSQWLINPASFVSGSCNSSGIG"
     misc_feature    1072..>1371
                     /gene="LOC139840955"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1270..1272
                     /gene="LOC139840955"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    <2101..2283
                     /gene="LOC139840955"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgccgtggc ttttatgcgg ggatttgaac gaggttcgtt ttcaatccga tagatttaat
       61 tctgagttta atccaaactg ggctatgcga ttcaatgatt tcattaataa tttgcgtctg
      121 atcgatattc cacttggtgg aaaaaggttt acaagggttt gcgataacgg aattaagttt
      181 agtaagttag acaggttctt aatctctgag gatttcaacc atttgtggcc tgacctgcat
      241 gccactgttc tggatagacg taactccgat catgctccta ttgttcttaa gaatggtcat
      301 ttcgacttcg gcccgaaacc tactaaggtt tttaatgagt ggctaaaaat cgagggagta
      361 gatgatatca ttgaaaaggc gtggattatc cccgttcaag gatcaaggcc tgactgtata
      421 atgagaaaca aacttaaaaa tgtgaaattg gaattaaaaa agtgcagctc catttttaac
      481 aatctcgaag agcaaatcat gaatcactcc aaggctgcaa acaggtggga aatcaaagca
      541 gagtctagat tgttaagcga tattgaaaga gatgagtgga tgaatgaaag aaaacaatgg
      601 ttcgaaaaag aaaagattca cattaacatg atgaaacaga aggccagagt tcgatggaat
      661 ttagaagggg atgagaattc gagatatttc cacaattttg tcaaacggag atttagcaag
      721 aactcaattc atggtatcca agttaatggc gtttggaact gtaatcctca atccatcaaa
      781 gacgaagtct attccttctt tgcaaataac ttcagaagga cggacttcga atatggatcc
      841 tttgatttcc aatgcactcg aattttggat gaagataaca gactactaga agcaaaattt
      901 tcggaagtgg agatatggaa agcgattcaa aactgttgta gttcaaaagc gcccgggcca
      961 gacgggttca acatgaagtt tttcaagaag ttttggtggc ttttgaatga tgacatcatt
     1021 aggattttcg attggttttg gaaccgaatg gaaatctcga aagggtgcaa cgcgtccttt
     1081 atcactttaa ttccaaagac tgacaaccct cttagtctaa ctgattatag acctataagt
     1141 ctaattggga gcatggtttg gagaaaatgg atcaaatgga ttagagcatg tctttcatcc
     1201 gctactattt ctgttcttgt aaacggatct ccaacactcg agttcaaacc ggagaaaggg
     1261 gtgagacaag gcgacccaat ctcgccattt cttttcaata tagcagcaga gggcctgaat
     1321 ttacttacta agcgagctat cgagtgcgga gaaataaaag gcatttcagt gggaagaaac
     1381 aaggtgacca atggggatgg caacgatggt ggtgttagta gagggttgtt cgtggtgatc
     1441 aaacaacgag atgaagttga cgggtgtttc gtggatggta gtagcagtgg ttggacgaat
     1501 tggtttatgg tggttgtgag ccggaagcaa caaagtatag gtgacgatgg gatggttgat
     1561 atgggtggct tcatgggttt atgtaatgca ttacaactta aatcaaacga gtgtgatgat
     1621 ggtttaatga agaaacagct tggagcaaca acttggggca acataatcaa agtggattct
     1681 gtaattgact cgaatggtat tgactttacg acttctttcg tcaaggaaat tgagaatggc
     1741 cattcaatcc tcttctggca tgatcattgg cttggaaatt gcaagcttaa agaagcattt
     1801 tacagattat gtatgttaga ccgcaacaaa caggcattcg tcggagatag aatcaagcag
     1861 gctgatgatg gttcggggaa actggatttt tcatgggagt gggacaggcc cattagtgga
     1921 aggacggggg cagatcttcg aaatctggaa tctttattag cttctgtcga gctaggaaat
     1981 caaacgaatg gcgcctggaa atggaatctc gaagctgatg gggtctttcg aacaaaatca
     2041 ctatccttaa ccatcgacaa aaaacgttta caatccgctg tggcaaatgc aactctccga
     2101 aataaatcta tccctcaaaa ggtgggagtc ttcgtatgga gggcccttca aaagagaatc
     2161 ccggttcgtg tggaacttga taaacgtggc atcgacttag attcaattct ttgtccatta
     2221 tgcaaaagcg atattgaatc ggtggatcac attttggtgc aatgctctct agttaaggaa
     2281 ttgtggaacc agttcttcaa atggtggaat gtggactcat ctctagcaat ctcattacaa
     2341 ttggtttttg atgactcttc ccaccttacg gcatccacca acattggtaa ggtcatatgg
     2401 caaggagcaa attcgtggaa cacggcttca atcttggcta atgtgcatgc tactagcttt
     2461 gggtggatct ctaaacggct caaaaaatcc aagctaattt ggagtcaatg gcttataaac
     2521 ccagcctctt tcgtttcggg ttcatgtaat agctcgggaa taggttaa
//
LOCUS       XM_071831197            2277 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840956), mRNA.
ACCESSION   XM_071831197
VERSION     XM_071831197.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2277
                     /gene="LOC139840956"
                     /note="uncharacterized LOC139840956; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139840956"
     CDS             1..2277
                     /gene="LOC139840956"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687298.1"
                     /db_xref="GeneID:139840956"
                     /translation="MAGASTDQSTNSTAAMNELKRKSGDVGWDYAILTDKNNLQKVKC
                     TLCGKVMSGGIHRLKQHVAQVTGNVASCSKATQEDIAKCQKAINDIGAKKKVKKDHDV
                     SVRMEVRNDMTSPIDLDESEEFEGSKPQRSYGPIDRFTTFDKGKSKQTNLDSVMRKES
                     ADRLDAYIARWAYQHAVPFNAVDNDEFVCILEAAGHHGPNGKPPSRYHLGEPLLKKEV
                     DRTKTRMKRYEDDWKISGCSIMTDAWSDRNRRSIMNLCANSSLGTVFLTSKECSDEAH
                     TSDYIYKYIEMCIEKLGPENVVQVMTDNAANNMGAAKLLKVKRPTIFWTCCSAHTINL
                     MLEGIGGKKGFKKTLEEARKITVFIYSHHMSLALMRKYTNKRNIVRPGVTRFASSFLT
                     LQSLLEKKTQLRHMFLTEKWEKCSLAKTKKGTDVKSLVMDDKTWAGVARCLSVFEPLV
                     KVLRMVDADWKPSMGFLHGELKKAQQQIREVFNNNYEKYKAIMEVISTKMEGRLDTCL
                     HLAAYFLNPFYLYNDVSILLDERANDAVVEVVEQMYPEDHEMQDTICNLELPIYRSKE
                     GKFGRTVAIKGCEVNDSKFNPASWWASYGASTPNLRKVAIRILSLTTASSGCERNWST
                     FEAIHTKKRNRLEAEKVNSLVYVQFNANLMKKNERRKERAGRDVLVSHDDVATEAQDW
                     IIDEGLTYELISEATGLKGANEPRRSSRRPRELFEEFDSASEEELEVDEDIEYESDGV
                     EIREQHYEHDKEFDIDED"
     misc_feature    610..1065
                     /gene="LOC139840956"
                     /note="Protein of unknown function (DUF 659); Region:
                     DUF659; pfam04937"
                     /db_xref="CDD:461492"
     misc_feature    1744..1950
                     /gene="LOC139840956"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggcaggag cgtctacgga tcaatcaacg aattctactg ctgctatgaa tgaactcaag
       61 aggaaatcgg gtgatgttgg ttgggattac gcaattttga ctgacaagaa taatttacaa
      121 aaagtgaaat gcacgctttg cggcaaggtt atgtcgggtg gtattcatag attgaaacag
      181 catgttgctc aggtaacagg aaatgtcgca tcatgctcta aagccaccca agaggatata
      241 gcaaaatgtc aaaaagctat taatgatatt ggtgctaaaa agaaagttaa aaaagatcat
      301 gatgtatctg tgagaatgga ggtaaggaat gatatgacaa gccccattga ccttgatgag
      361 agtgaagaat ttgaaggatc gaagccacaa cgttcttacg gtcccattga taggtttaca
      421 acttttgata aaggaaagag taaacaaacc aatcttgata gcgttatgag aaaagaaagt
      481 gcggatcgtt tagatgctta tattgctagg tgggcttatc agcatgcggt tccgtttaat
      541 gcggttgata atgatgaatt cgtatgtata ttagaggcgg ccggtcatca tggacctaat
      601 ggtaaacctc catcaagata ccacttagga gaacctctat taaagaaaga ggttgataga
      661 acaaaaaccc gcatgaaaag gtatgaagat gattggaaaa taagtggatg ctccattatg
      721 acggatgcat ggtccgatag aaacagaagg agcatcatga acttatgtgc taattcgagt
      781 ttgggtaccg tgttcttgac ttcaaaagag tgttcggatg aagctcacac aagcgattac
      841 atatacaaat atattgagat gtgcatcgaa aaacttggtc ccgaaaatgt ggttcaagtt
      901 atgaccgaca atgccgctaa taatatggga gcggcaaagt tgttgaaggt gaaacgacca
      961 acaatatttt ggacatgttg ttcggcgcac acaattaacc ttatgcttga aggtattggg
     1021 gggaaaaaag gcttcaaaaa gacactagaa gaagcaagaa aaataacggt gttcatctat
     1081 tcccatcata tgtcattggc tttaatgcgg aaatacacca acaagaggaa tattgtaaga
     1141 ccgggagtta caagatttgc ttcctcattt cttactttgc aaagtctact tgaaaagaag
     1201 acacaactaa gacacatgtt tttgactgag aaatgggaaa agtgtagctt agcaaagaca
     1261 aagaaaggga cggacgttaa atctttggtg atggacgaca aaacttgggc cggtgtggca
     1321 agatgcttaa gtgtttttga acctttagtc aaagtcttaa ggatggtaga tgccgattgg
     1381 aagccttcca tgggtttctt acatggtgag cttaagaagg cacaacaaca aattagagaa
     1441 gttttcaaca ataattacga aaaatataag gccatcatgg aagtcatatc aactaagatg
     1501 gaaggtagac ttgatacatg cctacacttg gcggcttatt ttttgaaccc gttttatctt
     1561 tataacgatg taagtatcct acttgatgaa cgtgcgaatg atgcggttgt tgaagttgtt
     1621 gagcaaatgt atcctgaaga tcatgagatg caagatacaa tatgtaattt ggagttgcca
     1681 atttacagga gtaaagaagg gaagtttggt cggacagttg caattaaagg atgtgaggtg
     1741 aacgattcta aatttaatcc agcgagttgg tgggcaagct atggtgcctc aactcctaat
     1801 ttgagaaaag ttgcaattag gatactttct ttaaccaccg cctcatcggg ttgtgaaaga
     1861 aactggagca cattcgaagc gatccatacg aaaaagagaa ataggctcga ggcagaaaaa
     1921 gtgaacagtc ttgtctatgt tcaattcaat gctaatttaa tgaaaaaaaa tgaaagaaga
     1981 aaggaacgag cagggcgtga tgtacttgta tcgcatgatg atgttgcaac tgaggcgcaa
     2041 gattggatta ttgatgaagg attgacttac gagttgatta gtgaggctac aggtttgaag
     2101 ggagctaacg aacctcgaag aagtagtaga cgaccgcgag aacttttcga agaattcgac
     2161 tcggcgagtg aggaggaact cgaagtagat gaagatattg agtatgagtc agatggagtt
     2221 gaaattcgtg aacaacatta tgaacatgat aaggaattcg atattgatga agattga
//
LOCUS       XM_071831198            1501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840957), mRNA.
ACCESSION   XM_071831198
VERSION     XM_071831198.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1501
                     /gene="LOC139840957"
                     /note="uncharacterized LOC139840957; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139840957"
     CDS             1..1386
                     /gene="LOC139840957"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687299.1"
                     /db_xref="GeneID:139840957"
                     /translation="MDEQRHDLSSVIPWVWVSEALANLKEVDVTTLINVFIRSPKITN
                     GVGSNAREIVSFRILERLFESDTRPLKPVQRAQSSGASFDFSKSCEDVLHHILAEMNE
                     PNIWDESEKSKWHAKPFIAYKRSCFSNSDLRRIKDTLVGGKPSYLTSLKQMVTSLHLN
                     IDGTKVHDVNGATSSNNQDKISCTDDTSIEENSNGEEEFVEPISEYRPRNDEEWYHVE
                     LNDISTKKHMFFSSICKNNEGFSHWKETNICMKCNKGGTLLVCSSNACSFVIHASCLV
                     SISALANESTAKFYCPFCRHSQAIASYWRAKRNASLARNDIAFFNCSSLKNIPERSHK
                     STDGRVDFRIINGVLNPDLGNRYYESSGSEGCSEEGQEQTDHTDYSIRPRMQIINPCT
                     NLYVPQRRRVPVPWTQSEEETLKKWVDKFTGDGFIPWRKILDLGSSKFQRGRTPGDLK
                     DKWRNMSRSSN"
     misc_feature    742..888
                     /gene="LOC139840957"
                     /note="PHD finger superfamily; Region: PHD_SF; cl22851"
                     /db_xref="CDD:473978"
     misc_feature    order(742..744,772..783,799..801,865..867)
                     /gene="LOC139840957"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276966"
     misc_feature    1210..1374
                     /gene="LOC139840957"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; Region: SANT_TRF;
                     cd11660"
                     /db_xref="CDD:212558"
     misc_feature    order(1210..1218,1273..1275,1285..1290,1330..1332,
                     1336..1344,1348..1356,1360..1365)
                     /gene="LOC139840957"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
ORIGIN      
        1 atggacgaac aacgtcatga tctttcttca gtcattccat gggtttgggt cagtgaagca
       61 cttgcaaact taaaggaagt agatgtaact acgttgatta acgtgttcat taggtctccc
      121 aaaatcacaa atggtgttgg aagtaatgca agggaaatag tctcatttag aatcttagaa
      181 cggttgtttg aatcagatac tcgaccccta aaacctgttc aacgtgccca aagttctgga
      241 gctagttttg acttttcaaa aagctgcgag gatgtgcttc accacatatt ggcagagatg
      301 aacgagccga atatatggga tgaatcagaa aagtcaaaat ggcatgctaa gcccttcatt
      361 gcgtataaaa gatcttgctt ttccaattcc gatttaagac ggattaagga tacactcgtt
      421 ggaggaaaac cgtcatatct gacgtcttta aagcaaatgg tcacatctct acatttgaat
      481 atagatggaa ctaaagttca tgatgttaac ggtgctactt ctagtaataa tcaagataaa
      541 atttcttgca ccgatgatac atctattgag gaaaatagta atggcgaaga agaatttgtt
      601 gagccgatta gcgaatatag accacgtaat gacgaggaat ggtatcacgt agagttaaat
      661 gatatttcca ctaaaaaaca catgtttttt agttcaatat gcaagaacaa cgaaggtttt
      721 agtcattgga aagagacaaa catctgtatg aagtgtaata agggtggcac gctgttggtt
      781 tgcagttcta atgcctgctc gtttgtcatt cacgccagct gcttagtgtc gatttcagcc
      841 ttggccaacg agtcaacagc aaagttttat tgcccgtttt gtagacattc tcaggcgatt
      901 gcaagctact ggcgagctaa gagaaatgcc tctttggcaa ggaatgatat tgcctttttt
      961 aactgctcgt cactgaaaaa tatacccgaa aggtcccaca agagtactga tggtcgtgtt
     1021 gactttcgta ttataaatgg tgttttgaat cccgatttag gtaaccggta ttatgaaagt
     1081 agtggtagtg agggatgcag tgaagaaggt caagaacaaa cagatcacac tgattactca
     1141 attagacccc gaatgcaaat tatcaatcca tgcacgaatt tatatgtacc acaaagaaga
     1201 cgagtaccag tcccttggac acaaagtgag gaagagacac taaagaaatg ggtggacaag
     1261 tttactggcg atggtttcat tccttggcgt aaaatattgg atctcgggtc ttcgaaattt
     1321 caaaggggcc gtacacctgg cgaccttaaa gataagtgga ggaacatgag tagaagctca
     1381 aattgaagct ttattttcgg tatgcaattc atctttcacg tggctttaca ctgagccgtt
     1441 gataatttta aggagatggc aacttagatt ggtatatttc acttgaatat ggttgtaatt
     1501 t
//
LOCUS       XM_071831199            1593 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840959), mRNA.
ACCESSION   XM_071831199
VERSION     XM_071831199.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1593
                     /gene="LOC139840959"
                     /note="uncharacterized LOC139840959; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840959"
     CDS             1..1593
                     /gene="LOC139840959"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687300.1"
                     /db_xref="GeneID:139840959"
                     /translation="MAHKRKGMSEEEVENKINQTITNLLPNIVAQAIDAMRKQGGETF
                     KHEEEDEYKEDRTVMGDAIHVWLERFQKQRPLSFSTAKRFWVPLAVYKLEGDAQCWWI
                     ALRQEKGGIEFENSLYWVDFKELFFRQYFSEAEKEAVIREYANIKQGNDESINDFTKR
                     FLRLVGLIGAVAGSAEDQSRKYKWAVHGCYHSKMINLKCFDVAEAADYARNLEMERAK
                     YLATKNDDGKNKRVKIAQPLRFVPPPTSKYGQQSGNQGYCGQQRGNGSGGVNANAPCG
                     TCGKNHLGRVCYRSAGSCFACGEVGHLAKDCKNPKPGFVPRVPAPAPGGRVFAMTAAQ
                     AVDVSGTITGHVFVHHRALLVLFDSGSTHSIVSIKSSKYLKVSPTWLPTPLSISTPMG
                     SIEIIDRVFRNCRLEFNDCMFPANLFPMTMHDFDIILGMDWLSRHHATIDCYSKSILF
                     GYHSILDCVFNGDLPVKSIKVISALKAQKLISHGCVGYLTLIQNLSIESPSLENFESF
                     PMYFLTNCGACLQFVKLNFRLI"
     misc_feature    262..546
                     /gene="LOC139840959"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    817..>951
                     /gene="LOC139840959"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    973..1353
                     /gene="LOC139840959"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1072..1074,1078..1080,1084..1086,1159..1167,
                     1282..1284)
                     /gene="LOC139840959"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1072..1080
                     /gene="LOC139840959"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1072..1074
                     /gene="LOC139840959"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1159..1170,1180..1191)
                     /gene="LOC139840959"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggcacata aaagaaaagg aatgtctgag gaagaagtag aaaacaagat taaccaaact
       61 atcacgaatt tgttacccaa cattgtagct caagctattg acgccatgcg taagcaaggt
      121 ggcgagactt ttaagcatga agaagaggat gaatataagg aggatagaac tgtaatggga
      181 gatgctattc atgtttggct agaacggttt caaaaacaac gtcctttgtc attcagtact
      241 gctaagagat tttgggtccc attggctgtt tataagctag agggggatgc tcagtgttgg
      301 tggatcgctt tgagacaaga gaaagggggt atcgaatttg agaattcatt atattgggtt
      361 gatttcaagg agttgttttt ccgtcagtac ttttctgagg cggagaaaga ggctgtgatt
      421 cgggagtatg cgaatattaa gcaagggaat gatgagtcta ttaatgattt cactaagagg
      481 tttttgaggc ttgtgggttt gattggggct gtggctgggt ctgctgagga ccaatctcgt
      541 aagtacaaat gggctgttca tgggtgctac cactctaaaa tgattaatct gaaatgtttc
      601 gatgtcgctg aggcagccga ttatgctcgg aatttggaga tggagcgagc caagtatttg
      661 gctactaaaa atgatgatgg taaaaacaag agggttaaga ttgcacaacc actacgattt
      721 gtgcctccgc cgactagcaa atatggtcag caatctggca accaagggta ttgtgggcag
      781 caaaggggta atggaagtgg tggtgttaat gccaatgcac catgtgggac ttgtggaaag
      841 aatcatctgg ggagagtttg ttatcgtagt gcgggttcat gttttgcatg tggagaggtt
      901 ggccacttag ctaaggattg caagaatcct aaacctgggt ttgttccgag ggttccggcg
      961 ccagctcctg gtggacgcgt ctttgctatg actgctgctc aggctgttga cgtgtcaggt
     1021 actattactg gtcatgtatt tgtacaccat cgtgccctct tagttctgtt tgattctggc
     1081 tctacgcact cgattgtatc tattaagagc tcgaaatatt tgaaagtgtc tccaacttgg
     1141 ttgcctactc ctttgtcgat ctccacccca atgggtagta ttgaaattat agatcgtgtg
     1201 tttcgaaact gccgtttgga attcaatgac tgcatgtttc ccgcaaatct ctttcctatg
     1261 accatgcatg actttgacat tattcttggc atggattggt tatctcgcca tcacgcgact
     1321 atcgattgtt attctaagag cattttgttt ggatatcatt ctatactcga ttgtgtcttt
     1381 aatggtgatc ttcctgtaaa atctattaag gttatctcag cgcttaaggc gcaaaagctc
     1441 atttcacatg gttgtgttgg ttatttaact ttgattcaga atttgtctat cgagagtcct
     1501 tcgcttgaaa atttcgagag tttcccgatg tatttcctga cgaattgcgg ggcttgcctc
     1561 cagttcgtga agttgaattt tcgattgatc tga
//
LOCUS       XM_071831200            2157 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840960), mRNA.
ACCESSION   XM_071831200
VERSION     XM_071831200.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2157
                     /gene="LOC139840960"
                     /note="uncharacterized LOC139840960; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840960"
     CDS             1..2157
                     /gene="LOC139840960"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687301.1"
                     /db_xref="GeneID:139840960"
                     /translation="MKMTPQMTIDEVVEKYMDNLRFVQQWVPDESSRIQHFVNVILPE
                     YRTFVRTATSLSQAIVLAKMAKSDVKDTRSRIFGNVVNQGGQTFSQSGSNFKKSGGFQ
                     SKGKSGQNSSGSGFGRGDWCSNCKSSHKGQCLEATRRCIRCGVIGHDPQGQVCVRHQP
                     EGLLPRVGRRGRSLHQQRLGLFRLLPIPSFDVVLGINWMSLHKAHIKCDKKIVTFRLT
                     ARTGVVARGERGGFSFQLISMMKAKKSLAKGCESFMAYVINTKKKKKTVSDILVVSEF
                     PKVFPDELPGLPPVREVEYKIELMPGTTPITKAPYRLAPSEIAEMMSQIQELLDCGFI
                     RPSSSPWGALVLFVKKKDEVEHAEHLRQVLNLLKREQLFANFSKCEFWLREVQFLGHA
                     IFAEDLSRISRKIAGSLTKLTRKDIAFRWNDEQEKAFQTLKQLLCQAPMLALPKGSND
                     FVVYCDVSIARSQEFTVYKELNSQSRWQELIKDYNCEIKYHPGKANVVADALSRKKSS
                     ENVKFLRLSITSDLIDQLKTVQVVALEDEHVKSELMTKRKFDLDDDSSGLKTFHDRMW
                     VPMLRDLRDLILTEAHKSRLTVQPGPKIVQMTAEKVAIAREKLKAARDRQKMYADPRR
                     RPVTFSVGDHVYLKVSPWKGVIRFGKRVVLDLPPELAGIHNTFNVCYLRKRKVEDEMQ
                     LLPLKDLKVDLSKKLVEEPIRIVDRNQGGVGNEGRV"
     misc_feature    <550..645
                     /gene="LOC139840960"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    <919..1173
                     /gene="LOC139840960"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    934..936
                     /gene="LOC139840960"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238185"
     misc_feature    1261..>1374
                     /gene="LOC139840960"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    <1384..1515
                     /gene="LOC139840960"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgaagatga cacctcaaat gacaattgat gaggtagtgg agaagtacat ggataatcta
       61 aggtttgtgc aacagtgggt gccagatgaa tcatctcgga ttcaacattt tgtgaacgtg
      121 attttaccag agtacagaac cttcgtgaga acagctacat cattatctca ggctattgtg
      181 ctagccaaga tggcgaaaag tgatgtcaag gatactagaa gtaggatttt tggtaatgtg
      241 gtgaatcaag gtggacaaac gttcagtcag tcgggatcta acttcaagaa gtcaggtggg
      301 tttcaatcaa agggtaaaag tggccagaat agttctgggt caggatttgg tagaggggat
      361 tggtgcagca attgtaaatc ttcgcataaa ggtcagtgtt tagaagcaac taggcggtgt
      421 ataagatgtg gtgttattgg tcacgatccg cagggtcagg tgtgcgttcg gcatcagccg
      481 gagggtctac tgcctagagt gggcagaaga ggaagaagcc tccatcagca gaggctaggg
      541 cttttcagat tgctgcctat ccctagtttt gacgtagtgt tagggataaa ctggatgagt
      601 ctacataagg cccacattaa gtgtgataag aagattgtga ccttccgttt gaccgctaga
      661 accggtgttg tagcccgtgg ggaacggggt gggttcagtt ttcagttgat ttcaatgatg
      721 aaggcgaaga agtcacttgc taagggatgt gaatccttca tggcctatgt tatcaatact
      781 aaaaaaaaga agaaaacggt ctccgatatt ttagtggttt ctgaattccc gaaggtgttt
      841 ccagatgagt taccaggtct acctccagta agggaagtag aatataagat tgagttaatg
      901 ccaggaacta ctccaattac gaaagctcca taccgtttag ctccatccga gattgccgag
      961 atgatgtctc agattcaaga actgttagat tgtgggttta ttcgaccgag ttcgtctccg
     1021 tggggtgctc ttgtattgtt tgtgaaaaag aaagatgagg ttgagcatgc tgagcatttg
     1081 agacaggttt tgaatctgtt gaaacgagaa caactgtttg ctaatttttc aaagtgtgag
     1141 ttctggttgc gagaggttca gtttttgggt catgctatct ttgctgagga tttatcaagg
     1201 atttctcgaa aaatagcggg ttcgttgact aaattgactc gaaaagacat agcctttcga
     1261 tggaatgatg aacaagaaaa ggcttttcag acgttgaaac aattgttgtg tcaggcacca
     1321 atgttagcct taccaaaggg ttcaaatgat tttgtggtat actgtgacgt ttcaattgcc
     1381 agatcacaag agtttacagt atataaagaa ttaaatagtc aaagtcggtg gcaagaattg
     1441 attaaggatt ataattgtga aattaaatac catccgggta aagcaaacgt cgttgcagat
     1501 gctttaagtc gcaaaaagtc tagtgagaat gttaaattcc tgcgtttgag tataacttca
     1561 gatttaatcg accaattgaa aactgttcaa gtcgttgctt tggaagatga acatgttaaa
     1621 tctgaactta tgactaaacg aaaatttgac ctagacgatg actcaagtgg acttaagacc
     1681 tttcatgacc gtatgtgggt gcctatgctc agagacttaa gggatttaat cttgacagaa
     1741 gcgcataaat ctagactgac agtccaacca ggtccgaaaa ttgttcaaat gactgccgaa
     1801 aaggttgcta ttgcgcgaga aaaattgaaa gccgctagag acaggcagaa aatgtatgct
     1861 gacccacgta gacgtccagt aacctttagt gtaggtgatc atgtgtatct aaaagtttca
     1921 ccgtggaaag gggttatcag atttggtaaa cgggtggttt tggatctacc gccagaatta
     1981 gccggtattc ataatacttt taatgtgtgt tatctacgta aacgtaaggt agaagatgag
     2041 atgcaacttt taccgttaaa agatttaaag gttgatttga gtaagaagtt ggtggaagag
     2101 ccgattcgta tagttgatcg taatcaaggg ggtgttggga acgaaggaag agtgtag
//
LOCUS       XM_071831202            2238 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides PHD finger protein
            At2g01810-like (LOC139840961), mRNA.
ACCESSION   XM_071831202
VERSION     XM_071831202.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2238
                     /gene="LOC139840961"
                     /note="PHD finger protein At2g01810-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 Proteins"
                     /db_xref="GeneID:139840961"
     CDS             1..2238
                     /gene="LOC139840961"
                     /codon_start=1
                     /product="PHD finger protein At2g01810-like"
                     /protein_id="XP_071687303.1"
                     /db_xref="GeneID:139840961"
                     /translation="MATLEACNQNNISKKRKQRIFEFKSFGKSLIAYSGAFRDNVRLF
                     LDEFGERIDGKQSVWSTLLLCESNGAVFPIYIVEESIDDSSVRPFCFHCKSVGWGHHF
                     VCKRRYRFLILPYGDKQSLKDYYDHKNNLELDDSLILHGLIHCNGFGHLISVNNLELA
                     SSVSLTQSDVMNLWDCICNSLRTRKVSVADVKLDKSMELRLLNGVAYKSSWFGNWGYK
                     FGNGSFGVTEAKYRGAVEFLAELDLDKIIVDFKNSRHGRKIEVLVGKYRRLSETRLIT
                     LSDILQCLLEFKRAEEIERRILGRSRKLPKVEHLTFDDKSQNLKCFDEFLASLMKADC
                     RWPEKQIEQLIVVIVKLLKKKMNVMPKHELKESAREYVRDIGLIDFVLKSISVLTYEN
                     YIIRSVVNSLTNVVEFQIHEMGKDSKKMKSVSSLCKLEPRWPKQRLEKTAKVIANILK
                     EHKVFSNGRNRPMLRKDLRDMASKFVGDTGLIDFVLKSVDNLVVGKHIVTRRKNPITR
                     LTEFDIRDKKGDEFSVEEEGDACGDLLFLYKNVLLGYPCWNSVSQAIRVVLNGKYFVK
                     EWEFGVKSDNLMTVTCRVLPSFEELETELTRPLPPGEMVMVPPWMTIGKLREVAQCAF
                     RDTYCIMDRFVVNQIGGLKGIRDEVVLSCAVEAGAQVWVRGCELDLDTGLRYEGGDGY
                     AMESKVDCVCGAHVDDGERMVACDECHVWRHTKCSGIEDDEAAPDYFVCGGCDSKSKS
                     ELLSQ"
     misc_feature    2065..2202
                     /gene="LOC139840961"
                     /note="PHD finger found in Arabidopsis thaliana PHD finger
                     protein MALE MEIOCYTE DEATH 1 (MMD1), PHD finger protein
                     MALE STERILITY 1 (MS1), and similar proteins; Region:
                     PHD_MMD1_like; cd15556"
                     /db_xref="CDD:277031"
     misc_feature    order(2065..2067,2101..2115,2125..2127,2185..2187)
                     /gene="LOC139840961"
                     /note="putative histone H3 binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:277031"
ORIGIN      
        1 atggcgacac tcgaagcttg caaccaaaac aatatcagta aaaagagaaa acagcgaatt
       61 tttgagttta aaagcttcgg taaatcgtta attgcttatt caggtgcgtt tcgtgataac
      121 gttcggttgt ttctggatga atttggcgag cggattgatg gaaaacagag tgtgtggtca
      181 actctgctgt tgtgtgaatc aaacggtgcc gtttttccta tttatatcgt tgaagagtcc
      241 attgatgata gttctgttcg tccgttctgc tttcactgca aatcagtcgg atgggggcat
      301 catttcgtgt gtaaaagaag ataccggttt ctgattctac cgtacggtga taaacaatca
      361 ttgaaggatt attatgatca taagaacaat ttggagcttg atgattcact aattttacat
      421 ggattgattc actgtaatgg ctttggtcat ctaatttctg tcaataactt agaattagca
      481 tcttcagttt cactcactca atcagatgtc atgaatctgt gggactgcat ttgcaattca
      541 cttagaacta ggaaggtatc agtggctgat gttaagttag ataaatcaat ggaactaagg
      601 ttattaaatg gagtcgctta caagagttca tggtttggga attggggata taaatttggg
      661 aatggaagtt ttggtgttac agaggctaaa tacaggggag ctgtagagtt tttagcagaa
      721 ctagaccttg ataagattat tgttgacttt aagaacagtc gccatgggag gaaaattgaa
      781 gttctagttg gtaaatatcg aagattaagt gaaactcgat tgattacctt gagtgatatt
      841 ctacagtgtt tgcttgaatt taagagagct gaagagatcg agaggcgaat tttgggacga
      901 tcgaggaagt tacctaaggt tgaacatctt acatttgatg acaaaagtca aaatttgaag
      961 tgttttgatg agtttttggc ttctcttatg aaggcagatt gtaggtggcc tgaaaagcag
     1021 attgaacagt tgattgtagt gattgtgaag ttactgaaaa agaagatgaa tgtaatgccg
     1081 aaacatgaac tgaaggagag tgccagagag tatgtcaggg atatagggtt gattgatttt
     1141 gtgttgaagt cgattagtgt actgacttat gagaattaca ttattcgtag cgtggttaac
     1201 tcgttgacaa atgtggttga gtttcagatt catgaaatgg gaaaggattc gaagaagatg
     1261 aagtcggtgt cctcattgtg taaattggag cccaggtggc ctaagcagag gctcgaaaag
     1321 acggctaaag tgattgcaaa tatcttgaaa gagcataagg tttttagtaa tggaagaaat
     1381 agaccaatgc tgcgtaaaga tttgagagat atggctagca agtttgttgg ggacacaggt
     1441 ttgattgatt ttgtattgaa atcggttgat aatttggtag ttgggaaaca cattgttact
     1501 agaagaaaaa acccgataac ccgattaaca gaattcgata tccgagataa aaaaggtgat
     1561 gaatttagtg ttgaagaaga gggagatgct tgtggagatc tgttgttctt gtataaaaat
     1621 gtcctattgg gttacccgtg ttggaactca gtgagtcaag caatccgagt tgtgctaaac
     1681 ggtaaatatt tcgttaagga atgggaattt ggggtaaaaa gtgataattt aatgacagta
     1741 acctgcaggg ttttaccgag ttttgaagag ctggaaactg agctgactag gccgctgcca
     1801 cctggcgaga tggtaatggt gccaccgtgg atgacaattg gaaaactaag ggaagtggca
     1861 cagtgtgcat ttagggatac ttattgtatc atggataggt ttgttgtgaa ccagattggt
     1921 gggttaaagg ggatacggga cgaggtggtg ttatcgtgcg ctgtagaggc aggtgcgcag
     1981 gtttgggtta gagggtgtga gttggacttg gatactgggc tgaggtatga aggtggtgat
     2041 ggatacgcaa tggaatcaaa ggtggattgt gtttgtgggg cccatgttga tgatggagaa
     2101 agaatggttg cgtgtgatga atgccacgtg tggagacata ccaaatgtag cggtatagag
     2161 gatgatgaag ctgcacctga ttattttgtt tgtggtggtt gtgattcgaa gagcaagagt
     2221 gaactgttaa gccagtag
//
LOCUS       XM_071831203            3276 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840962), mRNA.
ACCESSION   XM_071831203
VERSION     XM_071831203.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3276
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3276
                     /gene="LOC139840962"
                     /note="uncharacterized LOC139840962; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840962"
     CDS             1..3276
                     /gene="LOC139840962"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687304.1"
                     /db_xref="GeneID:139840962"
                     /translation="MSKEDSSSQTQTSNHDLATQLSNLLKNSFQSQPTHSKLSDSLKI
                     NLVLNSQNYALWARMIKVAIGGKLKSLLNHLTTDSPENEDDQWEQDDLVVFSWLIQNI
                     EPNLASNLTEFPTTKALWEALVVTYSSGKDKLQTFDLHVKANELKQENMLIEDLWIKL
                     QGIWGEIERRDPNPMKCSADIQAYNQIRAEQKLFQFLNALDQNHDQIKRELLRLNPLP
                     TVEEAYATVRKEKAHQQILGNNTQPSKQDIGSGLVAAEGAGLSMKPHRNPQQSKPNYT
                     SGNSRMDKNKLKCSKCGKTRHTREQCFEIVGFPEWWPGGPKKSGKAVAATVTEPPPTT
                     TEPELGFGGVAAHKTEQGKFLRAFSSLFTGYSSNKICHETNLGQRKPNRDVYLENRVY
                     HEPYLGKGEEEHACNLGNNERNIPVRKDNHAYSIGKVNDPVNRSRKDTGNSNSRIKGS
                     IKISGLNRKHGLYNTSGCKKEINTRIKGVPELRVGPERNRNRPNLFNKIKTQPKRPES
                     VISCHNSYSILNRIKNDEMSQSEANIVSENFKTKSWILDCGATDTMTFDKNDIVFKTK
                     PKKNKIQTANGEIIQVKSGGTIEISPTIKLPNCLYIPALSHKLLSDIRTGLVIGRGTE
                     KGGLYYIDEVSQQEKGIIHQTTCAHTPEQNGVAEQKNRILLEMTRALIIESKVPKSFW
                     PEALATATYLINRLPTKVLGTKTPRDVLSQFFTLPSSLNLEPRIFGCSVFVHIPKHER
                     TKLDPCAEKCVMVGYGVNQKGYRCYNPKRRNIITTMNCDFIETEYFYNNTQLTSEGEN
                     ENNDTLSWMTWVPPQIQNPEPMNSTPNPEPIQNSEPIQNPTPDHEPTQNYEPTETTPL
                     NHETTETSSTNEHQTQEEQIDSNPDETTQRYVLPQRINRGVPPKRYSPEKEAQRSRYP
                     MANIVQGNLSKEAQQFNSAIYSENIPTSIEQALKSKNWRKAIEVEMKALNDNDTWEKC
                     VIPQGKKPVGCRWVFTIKHKSDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTI
                     RVLFSVTANEDWPLHQFDVKNAFLHGELKEEVYMEAPPGFAENFKNREKQGWLIAKQP
                     ILL"
     misc_feature    <2356..>2550
                     /gene="LOC139840962"
                     /note="AIDA-I family autotransporter YfaL; Region:
                     PRK09752"
                     /db_xref="CDD:182059"
     misc_feature    2896..>3258
                     /gene="LOC139840962"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgtctaaag aagacagtag cagccaaacc caaaccagca atcacgattt agccacacaa
       61 ctaagcaatc tgttgaaaaa tagctttcaa tcccaaccca cccattccaa attatctgat
      121 agcttgaaaa tcaatcttgt ccttaatagt caaaattatg cactatgggc aagaatgata
      181 aaagttgcaa ttggagggaa attaaaatcc ctcttgaacc acttaaccac tgattcacca
      241 gaaaatgaag atgatcagtg ggaacaagac gacttagtcg ttttttcatg gcttattcaa
      301 aatattgaac ctaaccttgc aagcaaccta accgaattcc ccacaacaaa agctttatgg
      361 gaagctttgg tggttactta cagcagcggt aaggataaac tccaaacctt cgatctacat
      421 gttaaagcca acgaattaaa acaagaaaac atgttaatcg aagacctttg gatcaaatta
      481 caaggcatat ggggtgaaat cgagaggaga gatccaaacc caatgaaatg ctcagcagac
      541 atccaagcct acaatcaaat acgagctgag caaaagctct ttcaattcct caatgctctt
      601 gaccaaaatc atgaccaaat caaaagggag ttgcttcgat taaatccttt accaacggtg
      661 gaagaagctt acgccaccgt acgtaaggaa aaagctcacc aacaaatcct tggtaacaat
      721 actcaaccct caaaacaaga tattggttca gggttagttg ctgccgaagg agctgggtta
      781 agcatgaagc cacatcgaaa tccccaacaa tcaaagccaa attacacctc tggtaattca
      841 agaatggaca aaaacaagct caagtgctct aaatgtggca agacacgaca cacaagagag
      901 caatgcttcg agattgtggg gtttccagaa tggtggcctg gtggaccaaa gaaatccggc
      961 aaggcagtgg cggcaacggt aacagaacca ccaccaacca ccaccgagcc agaattaggg
     1021 tttgggggag tggcagctca caaaaccgaa caaggtaagt ttcttcgtgc cttttcctct
     1081 ttatttactg gttatagctc aaataagata tgtcatgaga caaatctagg gcagagaaaa
     1141 cccaatcgag atgtttatct agaaaatagg gtttatcacg agccatatct gggaaaggga
     1201 gaagaagagc acgcttgtaa cctagggaat aatgaaagaa acatacctgt tagaaaagat
     1261 aaccacgcgt atagcatagg gaaggtaaac gatccagtaa atagatctag aaaggatacg
     1321 ggtaatagta acagtaggat aaaaggatcc attaaaatta gtgggcttaa tagaaaacat
     1381 gggctctata atactagtgg ctgtaaaaag gaaataaata ctagaataaa gggtgtgcca
     1441 gaattaagag ttgggccaga aaggaatagg aataggccta atttatttaa taaaattaaa
     1501 acacaaccaa aaaggcccga atctgttatt tcttgccata atagttattc catcttgaat
     1561 aggataaaaa atgatgaaat gtcccaatcc gaagcaaata tagtctcgga aaattttaaa
     1621 actaagtcat ggatacttga ttgtggggca acggatacta tgacttttga taagaacgat
     1681 attgttttta aaactaaacc taaaaagaac aaaattcaaa ctgctaatgg tgaaattatt
     1741 caagtcaaga gtggtggaac tattgaaatt tcaccaacga ttaaattacc taattgtcta
     1801 tatataccag ctttgtctca taagctgtta tcggatatcc ggacgggact agtaattgga
     1861 cgtggcactg aaaagggggg actatattat attgacgaag tttcccaaca ggaaaaaggg
     1921 attattcatc aaacaacatg tgctcatacc ccggaacaaa atggtgttgc cgaacagaaa
     1981 aatcgaatac ttctcgaaat gactagagcc ttaataattg aatctaaggt tccgaaaagt
     2041 ttttggcctg aagcacttgc tactgcaact tatcttataa atcggttacc cactaaggtt
     2101 ttgggcacaa aaacccctcg ggatgtgcta tctcaatttt ttactctccc gtcctcactt
     2161 aatcttgaac ctcgaatttt tgggtgctcg gtctttgttc acattccaaa acatgagcgt
     2221 acaaaactcg atccatgtgc cgagaagtgt gtcatggtag gttatggtgt caaccaaaaa
     2281 ggatatcgat gttataaccc caaaagacgg aatatcatta ctacaatgaa ctgtgatttt
     2341 attgaaaccg aatactttta caacaacacc caactcacga gtgaggggga gaatgaaaat
     2401 aatgacactc tgagttggat gacatgggta cctcctcaaa ttcaaaatcc cgaaccaatg
     2461 aactcaacac caaaccccga gccaatacaa aactccgaac caatacaaaa cccgacacca
     2521 gaccatgagc caacacaaaa ctatgaacct accgaaacta ccccactaaa tcatgaaacc
     2581 actgaaacct cctcgactaa tgaacatcaa actcaagagg aacaaattga ctcgaatccc
     2641 gatgaaacca cccaacgata tgttctacct caaagaatca atagaggtgt cccaccaaaa
     2701 cgatactctc cagaaaaaga agctcaaaga tctagatatc ctatggctaa tatagtacaa
     2761 ggaaatctat caaaggaagc acaacaattt aattccgcaa tttactctga aaatattcca
     2821 acttccattg aacaagctct aaaatcaaaa aactggagaa aagcaataga agttgaaatg
     2881 aaagctttga atgataatga cacatgggaa aaatgtgtca tacctcaagg aaagaaacca
     2941 gtgggatgtc gatgggtatt tacgataaaa cacaaatcgg atggtaccat tgaaagatat
     3001 aaagctcgac tggttgctaa aggatatact cagacatatg ggatagatta ttccgagact
     3061 ttctcaccgg ttgcaaaaat tgacactatc agagtcctct tctcagtcac tgcaaatgag
     3121 gattggccat tacatcaatt tgatgtaaaa aatgcattcc tacacggcga attaaaggaa
     3181 gaagtctata tggaagcacc accaggattt gccgaaaact tcaaaaacag ggaaaaacag
     3241 ggatggttga ttgcaaaaca gccgatactc ctatga
//
LOCUS       XM_071831204            1344 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides type IV inositol
            polyphosphate 5-phosphatase 9-like (LOC139840963), mRNA.
ACCESSION   XM_071831204
VERSION     XM_071831204.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1344
                     /gene="LOC139840963"
                     /note="type IV inositol polyphosphate 5-phosphatase
                     9-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139840963"
     CDS             1..1344
                     /gene="LOC139840963"
                     /codon_start=1
                     /product="type IV inositol polyphosphate 5-phosphatase
                     9-like"
                     /protein_id="XP_071687305.1"
                     /db_xref="GeneID:139840963"
                     /translation="MRKEVMWPRLVASKILNKSVSDNVVADFPTSPESFHQFQTSDTE
                     EGGPVILHEIDTAKTFKIFVSTWNVGGVTPTDNLNIDDLLDTDNTRCDIYVVGFQEVV
                     TLKASNVVGLEKKKISSKWNSLIRKTLNKQSRSEVSNLKTGNSKLQQEFVCVVSKRMV
                     GLLLSVWAKSDVHQQIRNPDISSVGCGIMGCLGNKGSVSARFELQDTSFCFVCSHLAS
                     GGGEGDEQNRNSDAVNIFSRTSFPTTNGSSIHLPKRILDHDRVVLFGDLNYRISLPDK
                     ETRSLVNQKDWKTLVKHDQLRVELKDGQFGSWHEGDIDFAPTYKYLPNSDEYFCKNDD
                     AKRSPSWCDRVIWRGEGLKQILYERSESKLSDHRPVKAIFSTQVKASESGYRKFYYSN
                     GLGRIPTGLGFTSDEEYSTSDKLSFKFRHKIISLSYSCVWMDGYGPLSDLMGVAN"
     misc_feature    4..1137
                     /gene="LOC139840963"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(202..204,298..300,643..645,796..798,802..804,
                     1027..1029,1096..1101)
                     /gene="LOC139840963"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(298..300,1096..1098)
                     /gene="LOC139840963"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(643..645,802..804,1099..1101)
                     /gene="LOC139840963"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgcgaaaag aagttatgtg gccaagattg gtagcaagta agatactaaa caagtctgtg
       61 agtgataacg ttgtggccga ttttcctaca agcccggaat cttttcacca atttcagaca
      121 tcggatactg aagagggtgg accagtgata ttgcacgaaa tcgatactgc aaaaaccttc
      181 aaaattttcg ttagtacatg gaatgttgga ggggtaactc ctacggataa tttgaatatc
      241 gacgatttgt tggatacaga caacacgcgt tgtgatatat atgttgtcgg gtttcaagaa
      301 gtggtaactc taaaagcttc aaatgttgtt ggtctggaaa agaaaaaaat ttcgagcaaa
      361 tggaattcgt tgatcagaaa aacactaaac aagcaatcga gaagtgaagt tagcaattta
      421 aagactggaa atagtaaatt gcaacaagag tttgtgtgtg ttgtgagtaa acgaatggtt
      481 ggtttgttgt tatccgtttg ggctaaaagt gatgtacatc aacaaatccg aaaccccgac
      541 atctctagcg taggctgtgg catcatgggt tgcttaggaa acaagggatc agtttcagct
      601 cgtttcgagt tacaagacac gagcttttgc tttgtatgta gtcatctagc gtccggaggg
      661 ggagaaggcg atgaacaaaa tcgaaactca gacgctgtta acatattttc gcgtacaagt
      721 ttcccaacaa ctaatggttc ttcaattcac ctgcctaaaa ggattctaga ccatgatcgg
      781 gtggtgttgt ttggagactt gaattaccgg atttctttac ccgacaagga aacaagatca
      841 ttggtaaatc aaaaagattg gaaaacactt gtcaaacatg atcagttgcg agtggagctc
      901 aaggatggtc aattcggatc atggcatgaa ggagacatcg atttcgctcc aacctacaag
      961 tatcttccaa attccgatga atatttttgc aaaaacgatg atgcaaaacg ttcaccctcg
     1021 tggtgtgata gggtaatatg gagaggggag ggactaaagc aaatattata cgaaagaagt
     1081 gaatccaagt tgtcggatca tagacccgta aaggccatat tctctactca agttaaagcc
     1141 tcggaatcgg gataccgaaa gttttactat tcgaatgggt tgggtcgaat tccaacgggc
     1201 ttaggattca catcggatga agagtattct actagtgaca aattgagctt caaatttagg
     1261 cataaaataa tatctttgtc gtattcatgt gtatggatgg acggatatgg gcccttatca
     1321 gatttaatgg gtgtagccaa ctaa
//
LOCUS       XM_071831205            2145 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840965), mRNA.
ACCESSION   XM_071831205
VERSION     XM_071831205.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2145
                     /gene="LOC139840965"
                     /note="uncharacterized LOC139840965; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840965"
     CDS             1..2145
                     /gene="LOC139840965"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687306.1"
                     /db_xref="GeneID:139840965"
                     /translation="MSTEAAASMRWHEEGRTKDGLLRHPVDSLAWQTFDHKYPEFAKE
                     SRPSAPGNNIDVYLEPLVDELKLLWDHRVETYDSSTNNNFQMRTGMVWTISNFPAYAN
                     LSGWSTKGKLACPSCHKRTKWIRLRRSRKFVFMGHRRLLSKRHAYRKDKNSFDGTKEL
                     ETKPTFLTGSDVLNELNGIDEFKFGKLVKDNPVLPYNWKKRSIFFKLPYWKDNLIQHN
                     LDVMHIEKNVCDSVIGTLMNLDGKTKDHINGRYDLEEMGIRKKLHPEVLENNKVYLPP
                     ACFSMNKKEKDRFCRMLKAVKVPDGYSANISRCVQLNPPKIGGLKSHDNHILMQQLLP
                     ICIRNSLPKHVRSVVIKLCRYYRRLCCKVLDPTELVQMENDIGKILYDMERIFPPSFF
                     DVMVHLSVHLAYEARIGGIVHYRWMYPIERYLATLKSYVRNRSKPEGSISEGYLADEC
                     LKSRNYDDGGKEDGLPIFSMPGRPIGARKMALLSLDHLAKAHSYVLFNCSELESFRTE
                     HLSILQRENKKEHQHLIQRMHSNKFEKWFGKHVRKLHKQGVDGISEDLRHLANGPSEY
                     TEKKRKTQNNGVMLEATTNSFSSVRDKNPIFGSVTYYGVLKEIIELQYGADKKVVLFR
                     CDWISNGSSQKEDENGFTMLNFRRLKEDKEPFILASQAQQVFYVKDCVHKGWKVVIKT
                     KPRDSYEMDALTFLDDVETHMQSETGMGPQID"
     misc_feature    55..531
                     /gene="LOC139840965"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1075..1353
                     /gene="LOC139840965"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    1828..2037
                     /gene="LOC139840965"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgtcaactg aagctgctgc ctccatgaga tggcacgaag agggtcgcac gaaagatggt
       61 ttactgagac atccggtaga ttcactagct tggcaaacat ttgatcataa atatcctgaa
      121 tttgcaaagg aatcacgacc atctgcgcca gggaataata tagacgtata tttggaacct
      181 ctagtggatg agctaaagtt gttgtgggat catagagtag agacatatga ttcatcaaca
      241 aacaataact ttcaaatgcg tactggtatg gtatggacaa taagtaactt tccggcgtat
      301 gccaacttat ctggatggag cactaaaggt aaacttgcat gtccatcctg ccataagcgt
      361 acaaaatgga ttcggttgag acgtagtagg aaatttgttt ttatgggaca tcgtcgattg
      421 ttgtcaaaga gacatgcgta tcggaaggat aaaaattcgt ttgatggcac gaaagagttg
      481 gagactaaac caactttctt gacaggttca gacgttctca atgagctaaa tggtattgat
      541 gaatttaaat ttgggaaact agtcaaggac aacccagtat tgccgtataa ttggaagaag
      601 agaagtatat tcttcaaatt accgtactgg aaagacaact tgatacaaca taatctagat
      661 gtaatgcata ttgagaaaaa tgtatgtgat agtgtcattg gaacattaat gaatttagat
      721 ggaaagacaa aagatcatat aaatgggcgt tatgatttag aagaaatggg aattcgaaag
      781 aaactacatc ccgaagttct agaaaacaac aaagtatatt tgccacctgc gtgtttctca
      841 atgaataaaa aagaaaaaga tagattttgt cggatgctta aagcagtgaa agttccagat
      901 ggttattcag ctaatatttc aagatgcgtt caactcaacc ctccaaaaat tggtggccta
      961 aaaagtcacg acaatcatat tttgatgcaa cagttgcttc caatttgcat acgaaatagt
     1021 ctacctaagc atgtccgctc tgttgtgatc aagttgtgtc gttactatag acgcttatgc
     1081 tgtaaagttc tcgatccaac tgaattggtt caaatggaaa atgatattgg aaaaatactt
     1141 tacgatatgg agaggatttt tccaccgtcg ttctttgacg taatggttca tctttctgtt
     1201 caccttgctt atgaggctag aattggagga atagtgcatt atcgttggat gtatccaatt
     1261 gagaggtatt tagccacatt aaaatcttat gtgcgaaaca ggagtaaacc tgagggttca
     1321 atatcggaag gatatctagc tgatgagtgt ttgaaaagta gaaactatga tgacggtggt
     1381 aaggaggatg gtctaccaat attttctatg ccgggtcgac ccattggtgc tagaaaaatg
     1441 gctttactat ctctagatca tttggctaaa gcacattcat atgtgttgtt caattgtagt
     1501 gaactggaat cctttagaac agaacatctg agtattcttc agcgtgaaaa taagaaagaa
     1561 catcagcatt tgatacagcg tatgcacagt aataaattcg agaaatggtt tgggaaacat
     1621 gttcgtaagc tgcataaaca aggtgtagac ggaatatcag aagatctaag gcatttggca
     1681 aatggcccat ctgagtatac agagaagaaa aggaaaacgc agaataatgg agtaatgctc
     1741 gaggcaacaa caaatagctt ctcaagtgtt agagataaaa atcctatctt tgggtccgta
     1801 acatattacg gggttttaaa agaaatcatt gagctacagt atggtgctga caaaaaagta
     1861 gtcttgttcc gatgtgactg gatctcaaat ggttcaagtc aaaaggaaga tgaaaatggg
     1921 tttacaatgc tcaattttcg tcgattgaag gaagataaag agccgttcat actagcaagt
     1981 caagcacaac aagtgtttta tgttaaagat tgtgttcaca aaggatggaa agttgttatc
     2041 aagacaaagc ctagagattc ttatgaaatg gatgcactaa catttcttga tgacgtggaa
     2101 acacacatgc agagcgaaac aggtatgggt cctcaaattg attaa
//
LOCUS       XM_071831207             690 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CASP-like protein 4D1
            (LOC139840966), mRNA.
ACCESSION   XM_071831207
VERSION     XM_071831207.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 49% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..690
                     /gene="LOC139840966"
                     /note="CASP-like protein 4D1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840966"
     CDS             1..690
                     /gene="LOC139840966"
                     /codon_start=1
                     /product="CASP-like protein 4D1"
                     /protein_id="XP_071687308.1"
                     /db_xref="GeneID:139840966"
                     /translation="MARPDQQPESQNDVPPHAQTQIQLSETQTDDHSQVVILNHTESQ
                     TTSHDQTRISRAQVLAIVSLTIRVATWLCLLASLIILASNTSTINANAKLEFNSIYAY
                     RYMMSAIVIGFAYTSVQVLFEIYQVTIGKNIVTNIHFPKIIFYGDKFLLCMLATGVGA
                     AFGATLDLKKNIDALDDALAPLGFRSLSRLRTKLDNFYNMAYVSAGFLLIAFLCSIVS
                     SILSSLALLKR"
     misc_feature    175..642
                     /gene="LOC139840966"
                     /note="Casparian strip membrane protein domain; Region:
                     CASP_dom; pfam04535"
                     /db_xref="CDD:367980"
ORIGIN      
        1 atggcacgac ctgatcagca gcctgagtct caaaacgatg ttccacctca tgctcaaact
       61 caaattcagc tttctgagac tcaaacggat gatcatagtc aggttgtaat tctcaatcac
      121 accgagtccc aaacaacgtc tcatgatcag actcgtataa gtagagcgca agtgttggcg
      181 attgtgtcgt taactatcag agtagctact tggctttgcc tattggcgtc acttataatt
      241 ctggcttcca acacttctac aattaacgca aacgccaaac ttgagttcaa cagtatctat
      301 gcttatcggt acatgatgtc cgcaattgtg ataggttttg catacacgag tgttcaagtc
      361 ctctttgaaa tctatcaagt aaccattggc aagaatattg taaccaacat tcattttcca
      421 aaaatcatct tttatggcga caagttttta ttgtgtatgc tagctactgg tgttggtgca
      481 gcttttggtg caacgttaga tttgaagaaa aatattgacg ctcttgatga tgctctagca
      541 cctctaggtt ttagaagtct ttctcgactt cgaacgaagc ttgataactt ctacaatatg
      601 gcttatgttt cagctggatt ccttcttatt gcattcttat gctcaatagt ttcttccatt
      661 ctatcttcat tggcccttct gaagagatga
//
LOCUS       XM_071831208            1020 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840967), mRNA.
ACCESSION   XM_071831208
VERSION     XM_071831208.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1020
                     /gene="LOC139840967"
                     /note="uncharacterized LOC139840967; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840967"
     CDS             1..1020
                     /gene="LOC139840967"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687309.1"
                     /db_xref="GeneID:139840967"
                     /translation="MKSVTRRDQSSKGPIRSTCSSCANSSKGNSKAPSRNTKKSKLNS
                     KRQVSNSCNSSSFSVSNEGIRDFGQQLDLKGFGVGKDSELGWFKNVCRTEKPNIVVLQ
                     ETKMHIVDLNWIHALWGNHNCNFVQKEMVGKSGGQLIIWDTNCFDITNSFISDFCIGI
                     RGLWRNSGKEFNVINVYGPHDDRKKVECWNFLHNKVTADSNQSWIVCGDVNEVRTESE
                     RVNCQFIESWAKRFNEFIESSKLIDIPLGGRLFTRISDDGLKFRKLDRFLINDSFHNL
                     WKNLSVVALDRGKSDHCPIILKEDDRNFGPKPIKVFDEWLDMEGVWQIINYVWEEVVH
                     GWIVA"
     misc_feature    262..894
                     /gene="LOC139840967"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(307..309,529..531,625..627,631..633,793..795,
                     871..876)
                     /gene="LOC139840967"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(307..309,871..873)
                     /gene="LOC139840967"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(529..531,631..633,874..876)
                     /gene="LOC139840967"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaaatcgg ttacaagaag agatcaatca tctaaaggac ccattagatc cacttgttct
       61 tcatgtgcga attcttcaaa gggtaatagt aaagcaccat cgagaaacac caagaaatcg
      121 aaattgaact ccaaaaggca agtttcaaat tcctgtaatt cctcttcttt ttctgtttcg
      181 aatgaaggga ttagagattt tggacagcaa ctagatttaa aaggattcgg ggtcgggaaa
      241 gatagcgaat taggttggtt taaaaatgtc tgtaggactg aaaaacctaa tattgttgtt
      301 ttacaagaaa ccaaaatgca tattgtagac ttaaattgga ttcatgctct ttggggaaat
      361 cataactgta attttgtaca aaaggaaatg gttgggaaat cgggcggtca attgataatt
      421 tgggatacaa actgtttcga tattactaat tcgtttattt ctgatttctg tattggaatt
      481 cgtggattat ggaggaactc tggaaaagaa ttcaatgtaa tcaatgtcta tggaccacat
      541 gatgatcgta aaaaggtaga gtgctggaac ttcttgcata acaaagtaac ggccgattct
      601 aatcaatcat ggatagtatg tggggacgtt aatgaggtcc gtaccgaaag tgagagagtc
      661 aactgtcaat ttatcgaaag ttgggcgaaa aggtttaacg aattcattga atcctccaaa
      721 ttaatcgaca tccctcttgg tggtagatta ttcacacgga taagcgatga tggactcaag
      781 tttagaaaat tggatcgttt cctaattaat gattcttttc ataatctatg gaaaaatctt
      841 tcggtggttg cactcgatcg tggtaaatcg gatcattgtc ctatcattct caaagaagat
      901 gataggaatt ttggcccgaa accaatcaaa gtttttgacg aatggcttga tatggaggga
      961 gtttggcaaa tcataaacta tgtttgggag gaggtggtac acggatggat tgttgcttga
//
LOCUS       XM_071831209             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840968), mRNA.
ACCESSION   XM_071831209
VERSION     XM_071831209.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139840968"
                     /note="uncharacterized LOC139840968; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139840968"
     CDS             1..846
                     /gene="LOC139840968"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687310.1"
                     /db_xref="GeneID:139840968"
                     /translation="MCVGTEPQDCSFKSNMCWNCHKEGHRSVECRAARKSYSRAGSGS
                     GVRAMSAGGSSASFVGQKRKNPPPPEARAFQMLVDTATDTDDVITGMFLVNSVPARVL
                     FDCGSNRSFVSTTFCAKLNVPVSVLNEPLSVEVVDGRTVLVPNCVSGITIDIEGSFFP
                     VTCLVMPIPRFDVVLGIIWLSDHKADIKCDRKVIYFPVAAGKWVVARGDRGGFRCPLL
                     SVMKAKKSLAKGCDSFLAYVIDVKKEKKVVFDIPVGSEYPEVFLDELPGLPSIREVEY
                     NIRSS"
     misc_feature    211..606
                     /gene="LOC139840968"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(310..312,316..318,322..324,397..405,520..522)
                     /gene="LOC139840968"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    310..318
                     /gene="LOC139840968"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    310..312
                     /gene="LOC139840968"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(397..408,418..429)
                     /gene="LOC139840968"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgtgtgttg gaactgagcc tcaagattgt tcatttaaga gtaatatgtg ttggaactgc
       61 cataaagagg gtcacagatc tgtagagtgt cgagctgcaa gaaagagtta ttccagggca
      121 gggtccgggt caggggtacg tgctatgtca gctgggggat catctgcttc ctttgtgggg
      181 cagaagcgca agaatcctcc accacctgaa gctagagcct ttcagatgtt agtagacact
      241 gccactgata ctgatgatgt aatcaccggt atgttcttag taaattctgt gccggctcgt
      301 gtactatttg actgtggatc aaatcgctcg tttgtgtcaa ctacattttg tgctaagtta
      361 aatgtgcctg ttagtgtatt aaatgaaccc ttaagtgtcg aagtggttga cggtagaaca
      421 gttctagtcc caaattgtgt gtctggaatt actattgaca tagagggtag ttttttccct
      481 gtgacttgtt tagtgatgcc tataccaaga tttgatgtag tgttaggcat aatttggctt
      541 agtgaccata aggccgatat taagtgcgat aggaaagtta tctatttccc ggtggccgct
      601 ggaaaatggg tagtggctcg tggtgatcgt ggcgggtttc gttgtccact attgtcagtg
      661 atgaaagcta agaaatcttt ggccaagggc tgtgattctt tcttagccta tgtgatcgat
      721 gtgaagaagg aaaagaaggt ggtgttcgat attcccgtgg ggtctgaata tccagaagtg
      781 ttcctagatg aattgccagg cttaccgtcg atcagggaag ttgaatataa tataagatcg
      841 agttag
//
LOCUS       XM_071831210            1125 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840971), mRNA.
ACCESSION   XM_071831210
VERSION     XM_071831210.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1125
                     /gene="LOC139840971"
                     /note="uncharacterized LOC139840971; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840971"
     CDS             1..1125
                     /gene="LOC139840971"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687311.1"
                     /db_xref="GeneID:139840971"
                     /translation="MEGTNGNNGGMINGMERLVGNNYKYWKMCMEAYLQGQYLWELVV
                     GSDAIIPVETLEQGESRRKWKIKCGKALFALRTSISKEFIEHVRDLNSPKEVWDTLEK
                     LFTKKNTARLQFLENELAISRQEEIDTNDKISESRLRRYLIRGLKKEYVPFITSIHGW
                     ATQHSVEELENLLSNQEAFAKQMVKGFENDACGKVGHIKSYCRSKVTKANVACSSNDD
                     DEVKWEQCFTVDTVVKKNQWIIDSGCSHHVTGDGTLLHDVRDHNQNRVVITAYNSTHP
                     VKNEGNAIIDVNHNTFTLEDVYLVPKLTKNLVSVPQITESGKHGLFGPTDVKVLENVK
                     EIVGDVLFTGEKKGSLFVLSAGEAYVKKTSQTDNGAIWHA"
     misc_feature    52..129
                     /gene="LOC139840971"
                     /note="Domain of unknown function (DUF4219); Region:
                     DUF4219; pfam13961"
                     /db_xref="CDD:433608"
     misc_feature    220..546
                     /gene="LOC139840971"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggaaggca caaatggtaa caatggtggt atgatcaatg gcatggaaag acttgtaggt
       61 aacaactata agtattggaa gatgtgtatg gaggcttatc tccaaggtca atatctatgg
      121 gaacttgtgg tcggaagcga tgccataatt cccgtagaaa ctcttgagca aggcgagtca
      181 cgaagaaaat ggaagattaa gtgtgggaag gctctctttg cgttgaggac atcaattagc
      241 aaagagttca tagaacacgt tcgtgatctt aactcgccaa aggaggtttg ggatactctt
      301 gagaaactct ttaccaagaa gaataccgca aggttgcaat tcttggaaaa tgagttagca
      361 atctcaagac aagaagagat tgatacaaac gataaaatta gtgaatctcg gttgcgaaga
      421 tatttaattc gtgggttgaa gaaagagtat gttccattca taacctctat acatgggtgg
      481 gctactcaac attcggttga agaattggag aatttactct ctaatcaaga agcttttgcc
      541 aaacaaatgg tcaaaggatt tgaaaatgat gcgtgcggga aggttggtca catcaagagt
      601 tattgtcgtt ctaaagtcac aaaagcaaac gtggcttgtt caagcaacga tgatgatgaa
      661 gtcaaatggg agcaatgttt taccgttgat acggttgtta agaaaaatca atggattatt
      721 gattcgggtt gctctcatca tgtgaccggt gatggaactc ttcttcatga tgttagagat
      781 cacaatcaaa atcgagttgt aatcacggcc tacaactcaa ctcatccggt taaaaatgaa
      841 ggtaatgcta ttattgatgt taatcataat acttttactt tggaagatgt ttatcttgtt
      901 cctaaattga ccaagaatct agtttcggta cctcaaatta ccgaatccgg gaagcatggt
      961 ctttttggtc caacggatgt gaaagtcctt gaaaatgtca aggagattgt gggtgatgtt
     1021 cttttcacgg gagaaaagaa aggttctttg tttgtgttgt ccgcaggtga agcttatgtg
     1081 aagaaaacaa gccaaaccga caacggagct atttggcatg catga
//
LOCUS       XM_071831211             321 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00820-like (LOC139840972), mRNA.
ACCESSION   XM_071831211
VERSION     XM_071831211.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..321
                     /gene="LOC139840972"
                     /note="uncharacterized mitochondrial protein
                     AtMg00820-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139840972"
     CDS             1..321
                     /gene="LOC139840972"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00820-like"
                     /protein_id="XP_071687312.1"
                     /db_xref="GeneID:139840972"
                     /translation="MYPPIRKKPVGCHWVFTIKHKADGTIERYKARLVAKGYTQTYGV
                     DYSETFSSVVKIDTIRVLFSIAANKDWPLLSSKKRFTWKDHPDSPQALENGKFVDLKN
                     LCIG"
     misc_feature    10..>219
                     /gene="LOC139840972"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgtatcctc ccataagaaa gaagccagta ggatgccact gggtctttac aataaaacat
       61 aaagcagatg gaaccattga aagatataaa gctcgactcg tagcaaaggg atacactcag
      121 acttatgggg ttgattactc agaaactttc tcttcggtag tcaaaatcga cactatcaga
      181 gttctcttct caattgctgc aaataaagat tggcctctac taagctcaaa gaagagattt
      241 acatggaagg accatcccga ttcaccacaa gctttagaga atgggaagtt tgtcgactta
      301 aaaaatcttt gtatcggcta a
//
LOCUS       XM_071831212            1370 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840973), mRNA.
ACCESSION   XM_071831212
VERSION     XM_071831212.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 57% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1370
                     /gene="LOC139840973"
                     /note="uncharacterized LOC139840973; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139840973"
     CDS             63..1370
                     /gene="LOC139840973"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687313.1"
                     /db_xref="GeneID:139840973"
                     /translation="MLNFNRNSKEESDQEVMKHMCKFCNKCYPCGRSLGGHMRSHVIN
                     STDHQKMKLSSFENNGGTSIKNNNNNEVINGSSNSNDLGYELRKDPKKTPKAVINGTS
                     SSNDVAVLDKICKECGKGFQSWKALFGHMKCHSDKISNAKISNSNQDSWIGQSSNKNS
                     DAKIQQIKKSKSRKGATKSCIVTCDTTTAVTTTTNTTASSSVSMNANHASTSVVSDID
                     QEQEVEIAICLIMLSRDVGTWGNLIENGTKMKKLEKNGVHFDRLEKTTIRRDEFDGQM
                     KRKFECTTCNKSFHSFQALGGHKTSHKKLKECIDSKIAKISEPIFNLVGPSKNAMVLG
                     THECSICFRVFSSGQALGGHKRSHLTAEAKLNHQNMNMSENVDKPVNEIRCFLDLNMP
                     PDDCIEEKEQQETMMMNTSTTGSGYNTWYYNHESTLLGLISTS"
     misc_feature    399..473
                     /gene="LOC139840973"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
     misc_feature    900..974
                     /gene="LOC139840973"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
     misc_feature    1068..1136
                     /gene="LOC139840973"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 ctctctctct agagagagaa atcaagccaa gtttgtttat cttcatcatt attataaaaa
       61 gaatgttgaa ttttaaccga aattcaaaag aagaaagtga tcaagaagtg atgaaacata
      121 tgtgtaagtt ttgcaacaag tgctaccctt gtggcagatc attgggaggt cacatgaggt
      181 ctcacgtgat caactcaact gatcatcaga aaatgaagct ctcatctttt gagaacaatg
      241 gcggaacctc gataaagaac aacaataaca atgaagtcat taatggttct tcaaattcga
      301 atgatttggg ttatgaactt agaaaagatc ccaaaaagac tccaaaagca gtcattaatg
      361 gtacttcgag ctcaaatgat gttgctgttc ttgataagat ttgtaaggaa tgtgggaaag
      421 gttttcaatc atggaaggcc ttatttggac acatgaaatg tcactccgat aaaatatcga
      481 acgccaaaat ttcaaattca aatcaagatt cttggattgg acaatcaagt aataagaatt
      541 cggatgcgaa aattcagcaa ataaagaaat caaagtcaag aaaaggagca actaaaagtt
      601 gtatagttac ttgtgataca actactgctg ttaccacaac cacaaatact acagcttcat
      661 cttcggtatc catgaatgct aaccatgctt caacaagtgt tgtttctgat atcgatcaag
      721 aacaagaagt agagattgct atctgtttga tcatgctttc aagagatgta ggaacatggg
      781 gtaatctaat tgaaaatggt actaagatga agaaattaga aaaaaacgga gttcattttg
      841 atcgattaga aaaaactaca attcgtcgag atgaatttga tggtcaaatg aagagaaagt
      901 ttgagtgtac tacttgcaac aagagttttc attcttttca agcacttggt ggccataaaa
      961 caagtcacaa gaaattaaag gaatgtattg attcaaaaat cgcgaaaata agtgaaccca
     1021 ttttcaatct tgttggccct tcgaagaacg cgatggtttt aggaactcat gagtgctcaa
     1081 tttgctttag agttttttct tcaggacaag ctttgggagg tcacaagaga tcacatttga
     1141 cagcagaagc taaactgaat caccaaaaca tgaatatgag tgaaaatgtt gataaaccgg
     1201 ttaacgaaat ccgatgtttt cttgatctaa acatgccacc tgatgattgt atagaagaga
     1261 aagaacaaca agagacaatg atgatgaata caagtaccac agggtcaggg tacaatacat
     1321 ggtactacaa tcatgaatca acactacttg gtttgatatc aacaagttga
//
LOCUS       XM_071831213             978 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840975), mRNA.
ACCESSION   XM_071831213
VERSION     XM_071831213.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..978
                     /gene="LOC139840975"
                     /note="uncharacterized LOC139840975; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840975"
     CDS             1..978
                     /gene="LOC139840975"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687314.1"
                     /db_xref="GeneID:139840975"
                     /translation="MRSDSPHSSSLGTWTNIILAGKEIDEMNIPFSNSFVKTLGDGSS
                     TAFWKEVWIGSSKLCDKYPRLYMLECVQNAMVSDRLQICNATMTYNWNWIRTPCGRTM
                     GKLDSLTELLSGTSLSSETKDKWLWIMSGNERFTVKILSSIIDESLLAIGTNNYETIR
                     NNLVPKKLEIFTWRVIKKRILVKLELDKRGIDLHSVRCPLCDDDLETIDHALIFCKHS
                     LDVWNRIFKWWGLGNFSNLSTNEILRGIAPSQMSNLGRLIWQAVEWVCVYFIWKNRNN
                     RVFHGKMWNTPIALNEIQSKSFEWISHRSKGKKLDWFDWLNNPSVYLTI"
     misc_feature    <481..663
                     /gene="LOC139840975"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagaagtg actcacctca ctcctcatct cttggcactt ggactaacat tattttggca
       61 ggaaaggaaa ttgatgagat gaatattccc tttagcaatt ctttcgtgaa aacattgggc
      121 gatggatctt caacagcttt ttggaaagaa gtgtggattg gaagcagcaa actttgcgac
      181 aagtacccaa gattatatat gctggaatgt gtgcagaatg ctatggttag cgatcgactt
      241 cagatttgca acgcaactat gacgtacaac tggaactgga taagaactcc ttgcggcaga
      301 accatgggta aacttgattc attaactgaa ttgttgtcag gtacaagtct gagcagcgaa
      361 accaaagata aatggttgtg gatcatgtct ggaaatgagc gatttactgt gaaaatatta
      421 tcaagcatca tagacgagtc ccttctagca attggaacca ataattatga aacaatccga
      481 aacaacttgg taccaaaaaa gttggaaatt ttcacatgga gagttatcaa aaaacgcatt
      541 ctcgtcaaac tcgaactcga caaacggggc attgaccttc atagcgttag atgccctctt
      601 tgtgatgacg atttagagac cattgatcac gcattaatct tttgcaaaca ctccttggac
      661 gtgtggaacc gtatttttaa gtggtggggt ttgggcaatt tctcaaacct tagtactaac
      721 gaaattctac gtggtattgc tccatcccaa atgtcaaacc tcggaaggct aatttggcaa
      781 gccgtcgaat gggtttgtgt ttatttcatt tggaaaaatc gtaataatag ggttttccac
      841 ggtaaaatgt ggaatactcc gattgctcta aatgaaatac aatccaaatc cttcgaatgg
      901 atatcgcata gatcgaaagg aaagaaacta gattggttcg attggttaaa caacccgagt
      961 gtgtatctta caatttaa
//
LOCUS       XM_071831214            1146 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cyclic dof factor 1-like
            (LOC139840977), mRNA.
ACCESSION   XM_071831214
VERSION     XM_071831214.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1146
                     /gene="LOC139840977"
                     /note="cyclic dof factor 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840977"
     CDS             1..1122
                     /gene="LOC139840977"
                     /codon_start=1
                     /product="cyclic dof factor 1-like"
                     /protein_id="XP_071687315.1"
                     /db_xref="GeneID:139840977"
                     /translation="MEATGIRLFGKSISCQTKTNPTVTSTGECRHHEQQAAAYDIVHA
                     FQPDSTYNNQHLQQENQECESYQKEDAKPNTSITTEDNNSATTETEQDATNLQLKKPD
                     KLLPCPRCNSMDTKFCYYNNYNVKQPRHYCKSCQRYWTAGGTMRSMAVGSGRRKNKNP
                     TSQIDHNVLPRLVSFGSNLPRVDTAVSCTDKENVDECSSGSTITTSNSVVEKPQDENG
                     FRSHFVPCIPGVTWSYNPLNSANIPVPMSIYPSPYWNYIPWLPVSSSSSTQIDMDSFV
                     LGKRSRDGETVTLNGSEEPSRKKNSILTPKTLRIDDPDEAAKSSIWSTLGIMNENIST
                     RGMFKAFQPKDENIKQHLVLQANPAAFSRSLCFQERVYI"
     misc_feature    310..480
                     /gene="LOC139840977"
                     /note="Dof domain, zinc finger; Region: zf-Dof; pfam02701"
                     /db_xref="CDD:397014"
ORIGIN      
        1 atggaagcta ctggcatcag actgtttggc aagagcataa gctgccaaac gaaaactaat
       61 cctaccgtca cctccaccgg agaatgtcgt catcatgaac aacaggctgc agcttacgat
      121 atcgttcatg ccttccaacc ggatagcaca tacaataatc aacacttgca acaggagaat
      181 caagagtgtg agtcttatca gaaggaagac gcaaaaccta atacatctat cactactgaa
      241 gacaataatt ctgcaacaac tgaaacagaa caggatgcaa cgaatttgca acttaaaaag
      301 cccgataaac ttcttccgtg tcctcgttgt aatagcatgg acacaaaatt ctgttattat
      361 aacaattaca acgtcaagca gccacgtcat tattgtaaga gttgtcaacg gtactggact
      421 gcaggcggca ctatgagaag catggctgtt ggatcgggtc gccgaaaaaa caagaatcca
      481 acatctcaga ttgatcacaa tgtccttccc agactcgttt catttgggtc caatttacca
      541 cgtgttgata ctgcagtttc ttgtacagat aaagagaacg ttgacgaatg ctcaagtgga
      601 tctacaataa caacatctaa ttcagtagtc gagaaaccgc aagatgaaaa tggatttcgt
      661 tctcattttg taccttgtat accaggtgtt acttggtctt ataatccgtt gaattcagct
      721 aatattcctg ttccaatgtc aatataccct tcgccttatt ggaattatat tccttggtta
      781 cctgtatcat catcatcatc tacacaaatc gatatggact cgtttgtatt gggaaaacgt
      841 tcaagagacg gggaaacggt aacattaaat ggttctgaag agccatcgag aaagaaaaat
      901 tcgattttga ctccaaagac tcttagaatt gatgatcctg atgaagctgc aaagagttct
      961 atttggtcaa cacttggaat catgaacgaa aatattagta ctagagggat gtttaaggcc
     1021 tttcaaccaa aagatgaaaa tatcaagcaa catttagttt tgcaggcaaa tcctgctgcg
     1081 ttttctaggt cattatgctt tcaagaaaga gtgtatatat aatcgtttat cgatcttgag
     1141 ttgatc
//
LOCUS       XM_071831215             552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139840978), mRNA.
ACCESSION   XM_071831215
VERSION     XM_071831215.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..552
                     /gene="LOC139840978"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139840978"
     CDS             1..552
                     /gene="LOC139840978"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687316.1"
                     /db_xref="GeneID:139840978"
                     /translation="MYLTASRPDIMFATCLCARYQAQPNVNHMLAAKKIMRYLKGTPN
                     FGLWYPRKDGFDLTAFSDSNYGGCKRDFKSTSGCCQFLCSWLISWQCKKQTAVAQSTC
                     EAEYIAANPVNHSKTKHTGIKYHFIRDCYEKKLIDVLQIGTTTQRADLFTKVFDRPRF
                     LFLLNVLGVKDRAEVVSDKELLK"
     misc_feature    172..474
                     /gene="LOC139840978"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(184..195,298..306,313..315,376..378,457..459)
                     /gene="LOC139840978"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtatctta cagcgtctcg cccagatatc atgttcgcta cttgtttgtg tgctcggtat
       61 caggcacaac cgaatgtgaa tcatatgtta gcagcaaaga agatcatgcg ttatctaaag
      121 ggaactccaa actttggctt atggtatcct agaaaggatg ggttcgatct aacggctttt
      181 agtgattcta attatggggg ttgtaagaga gatttcaaat caacctcggg atgttgtcag
      241 tttctatgta gctggttgat aagttggcag tgtaagaaac aaacggcagt cgcacaatcg
      301 acgtgtgagg ctgaatatat tgcagcgaat cctgttaatc attctaagac caaacacaca
      361 gggatcaagt accatttcat tagggactgt tatgaaaaga aactaataga tgtcctacaa
      421 ataggtacga caacccaaag ggctgacttg tttacaaaag tgtttgatag acctcgtttc
      481 ctattcctat taaatgtgtt aggtgtgaaa gatagggcgg aagttgtgtc cgacaaggag
      541 ttattgaagt aa
//
LOCUS       XM_071831217             888 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139840979), mRNA.
ACCESSION   XM_071831217
VERSION     XM_071831217.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..888
                     /gene="LOC139840979"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139840979"
     CDS             1..888
                     /gene="LOC139840979"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687318.1"
                     /db_xref="GeneID:139840979"
                     /translation="MKDLGPLHSFLGISVVRTKQGLFLTQQAYAKDIINRSGISNCNS
                     VSTPVDTNGKLSSKQGRPYANITKYRSLAGALQYLTFTRPDISYAVQQVCLHMHDPKD
                     IHMDALKRIIRYLKGTTELGIHITRSHYKELISYTDADWGGCPDTRRSTSGYCVYYGD
                     NLISWSSKRQTTLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATLVFCDNIS
                     AIYLSGNPVQHQRTKHIELDIHFVREQVAKGQVRVLHVPTRYQIADIFTKDLPRLLFT
                     EFRSSLRIGKLDASTAGAY"
     misc_feature    <1..147
                     /gene="LOC139840979"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    406..816
                     /gene="LOC139840979"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(412..423,526..534,541..543,643..645,721..723,
                     802..804)
                     /gene="LOC139840979"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaagatt taggtccttt gcattctttt ttgggtattt cggtggttcg taccaaacag
       61 ggtctcttct tgactcaaca ggcatacgcg aaggatatta tcaatcgatc cggcatttca
      121 aattgcaatt ctgtctcaac accagtcgat actaatggga aattgagttc aaagcaaggt
      181 cgtccgtatg ccaacattac taaatatcga agtttagcag gtgctttgca ataccttacc
      241 ttcacgagac cggatatttc ctacgcggtt caacaagttt gtttacatat gcacgatccc
      301 aaagatatac acatggatgc tttgaaacgt attatccggt acttaaaagg gaccaccgag
      361 ctcggcattc atattactcg atctcactac aaggagctaa tctcctacac cgacgctgat
      421 tggggtggtt gtccggacac tcgaagatcc acctccggtt attgtgttta ctacggtgat
      481 aacctcattt catggtcttc taaacgtcag acaaccctat ctcgttctag tgccgaagct
      541 gagtatcgtg gtgtcgctaa cgtagtagcc gagtcatgtt ggctacgtaa tttgcttctt
      601 gagcttcatt gtccaatttc gaaagccacg ttggtctttt gtgacaacat tagcgcaatt
      661 tatttgtccg gaaatcccgt gcaacaccaa cgcaccaaac acattgaact ggatattcat
      721 tttgtccgag aacaggttgc caaaggtcaa gttcgcgttc tgcatgtgcc tactagatat
      781 cagattgctg acatttttac aaaggatctt ccacgtttgc tctttacgga atttcgttcc
      841 agccttcgca tcgggaaact cgacgcttcg actgcggggg cgtattag
//
LOCUS       XM_071831218            2405 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides wall-associated receptor
            kinase 2-like (LOC139840981), mRNA.
ACCESSION   XM_071831218
VERSION     XM_071831218.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2405
                     /gene="LOC139840981"
                     /note="wall-associated receptor kinase 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139840981"
     CDS             1..2349
                     /gene="LOC139840981"
                     /codon_start=1
                     /product="wall-associated receptor kinase 2-like"
                     /protein_id="XP_071687319.1"
                     /db_xref="GeneID:139840981"
                     /translation="MHRALFFLLFVYLPHLQSISPAAATTTNNVTLPGCPSKCGNVTV
                     PYPFGIVSPSSNSSCSIDPWFDITCNTSFNPPKAFLSADKFAYTGFGSSHRVEVLDIS
                     DEYIRVKNTVASKCYNQSGGVIDDNATGLVLSHSYFTLSELNKLITIGCDEYALVSPI
                     AGIEGKNFTSGCVTVCSNVQDVPIGSCSGMGCCSTSLPTGLTTYVAQVFTLNHHTRIW
                     SFDKCGYVFLGEQTAFTFQGPSDFTDPNFANRVVDTVPVVLDWVIGSATCNDYKNTPD
                     YYCQQNSVCVDFKGGNGGYRCSCQNGYQGNPYLTPGCLDIDECADPNNNPCNGTCTNL
                     PGSFNCSCPHGYEGDGLKNGRGCMPTNSKSPALKLSLGIGFGFLSIFIGMGWMYFSQQ
                     RRKVIKLREKYFLKNGGMLLKQQLDSNEDGSVNQSTKIFTTEELKKATNNFSEDRILG
                     RGGYGTVYKGILPNGNIVAIKKSKVMDESQIEQFINEVVILTQINHRNVVKLLGCCLE
                     SEVPLLVYECVSNGTLFDQIHRIGGAMAWLTWDHRLRIAIESAGALAYLHSAATKPII
                     HRDVKSANILLDDNLVTKISDFGASRLIPLDQAQVTTLVQGTLGYLDPEYFHTSQLTD
                     KSDVYSFGVVLLELLTGKKPLCIENGKVVRNLATFFLESLKENKLFQILDPRVVREGS
                     LEQLQAIGSLVKRCLNMNGYDRPSMKEVVMELERVRKLTKQPWVNQQGSHEGGNLIHA
                     SDQGENSDLYGDSMNPYTGSIELSSNYSSDQFRSLYPTNEPR"
     misc_feature    <835..915
                     /gene="LOC139840981"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; Region: EGF_CA; cd00054"
                     /db_xref="CDD:238011"
     misc_feature    943..1047
                     /gene="LOC139840981"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; Region: EGF_CA; cd00054"
                     /db_xref="CDD:238011"
     misc_feature    order(943..945,952..954,997..999)
                     /gene="LOC139840981"
                     /note="Ca2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238011"
     misc_feature    1345..2148
                     /gene="LOC139840981"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1345..1359,1369..1371,1405..1407,1411..1413,
                     1498..1500,1546..1557,1567..1569,1573..1575,1705..1707,
                     1711..1713,1717..1722,1726..1728,1759..1761,1768..1770,
                     1819..1830)
                     /gene="LOC139840981"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1345..1359,1369..1371,1405..1407,1411..1413,
                     1498..1500,1546..1557,1567..1569,1705..1707,1711..1713,
                     1717..1722,1726..1728,1759..1761)
                     /gene="LOC139840981"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1357..1359,1567..1569,1573..1575,1705..1707,
                     1711..1713,1717..1719,1768..1770,1819..1830)
                     /gene="LOC139840981"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1756..1779,1807..1830)
                     /gene="LOC139840981"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 atgcaccgtg cacttttctt cttgctattt gtatatctac cgcaccttca atcaatctca
       61 ccggcagccg caaccacgac caacaacgta acacttccgg gatgcccaag taaatgcggg
      121 aacgtgacag taccataccc gtttggtatc gtatctccat cttctaattc aagttgctcc
      181 attgatccat ggttcgacat cacgtgcaac acatcattca atcccccgaa agctttttta
      241 tcggctgaca aatttgcgta cactggattt ggtagttctc atcgggtgga ggtgttggat
      301 atatcggacg aatacatacg cgtaaaaaat acagtggctt ccaagtgcta caatcaaagt
      361 ggtggtgtga tagatgacaa cgccacggga ctagtgttgt cacactcgta tttcacgtta
      421 tcggaactga ataaacttat aacgattggg tgcgatgaat atgcgctcgt cagcccaatt
      481 gcagggatag agggcaagaa tttcactagt ggatgcgtta ctgtttgctc taatgttcaa
      541 gatgttccca tcggttcatg ttcaggtatg gggtgttgct caacaagctt gcccacaggt
      601 ctaactactt acgtagcaca agtattcaca ctgaaccatc acacacggat ctggtcgttt
      661 gataaatgtg ggtatgtttt tctgggagag caaactgcat ttacatttca gggcccttcc
      721 gattttacgg accctaattt tgccaatagg gtagttgaca ccgttccagt tgtgcttgat
      781 tgggtgattg ggagtgcaac ctgtaacgac tataaaaaca cacccgatta ttactgtcaa
      841 cagaatagcg tttgtgtaga ttttaaaggt ggcaatggag gctatagatg ctcttgccaa
      901 aatggttatc aaggaaatcc atatcttaca cctggttgtc tagatatcga tgagtgtgcg
      961 gatcctaaca acaatccgtg taacggaact tgtactaatc tgcctggaag ctttaattgt
     1021 tcgtgccctc atggatatga aggagatggg ttaaagaatg gaagaggttg catgcctaca
     1081 aattctaaat ctccggcact taagttgtct cttggaattg ggtttgggtt cttgtctata
     1141 tttataggaa tgggctggat gtatttcagc cagcagagaa gaaaagttat caaattaagg
     1201 gagaagtact tcttgaaaaa tggtggcatg ttgttgaaac aacaacttga ttccaatgaa
     1261 gacggtagcg ttaatcagtc taccaaaatt tttacaaccg aagagcttaa aaaagcgact
     1321 aacaactttt cggaagatag gattcttggt cgtggtggtt atgggacggt atataaaggg
     1381 atcttaccca atggaaatat cgtagctata aagaaatcaa aagttatgga tgagagtcaa
     1441 attgaacagt ttatcaacga ggttgtgatt ttgactcaaa ttaatcatcg caacgttgta
     1501 aagcttttag gttgttgttt ggagagtgag gtcccgttac tagtctacga atgtgtgtca
     1561 aacggtactc tatttgatca aattcatagg atcggtggtg caatggcttg gttaacttgg
     1621 gatcatcggt tgagaatagc gattgagtca gccggagcac ttgcttacct tcactcggcc
     1681 gctacaaagc ccataatcca tcgagatgtg aaatccgcca atattttatt agatgataac
     1741 ttagtcacca aaatttcgga ttttggggct tcaagattga taccgttgga ccaagcacaa
     1801 gtgactacat tggttcaagg gacgttagga tatttggatc cagaatactt tcatacgagt
     1861 cagttaactg ataagagtga cgtttatagt ttcggggttg tacttttgga gcttctaaca
     1921 ggtaagaaac cactatgcat agagaatggt aaagttgtaa gaaacttagc tacttttttc
     1981 cttgaatctt taaaagaaaa caagttgttt caaattcttg acccgagagt agtcagagag
     2041 ggttcgctcg agcaacttca agcgatcggt tcacttgtga aacgatgtct taatatgaac
     2101 ggctacgaca gaccatcaat gaaggaagta gttatggaac tagagcgggt aaggaaatta
     2161 acgaaacagc cgtgggttaa ccagcaaggt agtcacgagg gaggtaattt aatccacgcg
     2221 agcgatcagg gagaaaattc ggacctttat ggtgattcga tgaacccata tacgggctcg
     2281 atagagttat ctagcaacta cagttcggat caatttcgtt ctttataccc tactaatgaa
     2341 cctagatgat ttgccattgt gggctgcttg aaattgttat attttcttat atcttttatg
     2401 tacgt
//
LOCUS       XM_071831220             450 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840982), mRNA.
ACCESSION   XM_071831220
VERSION     XM_071831220.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..450
                     /gene="LOC139840982"
                     /note="uncharacterized LOC139840982; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840982"
     CDS             1..450
                     /gene="LOC139840982"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687321.1"
                     /db_xref="GeneID:139840982"
                     /translation="MDKAFKMLEFLVDDSDDEKIVSFVKSLTQEEVDGEASSSRVPRS
                     RIYIVRDREDAAIRLYNDNFAESPVFSDKYFKRRFRMSRELFLRIVEGISNFNSVVIP
                     DYFMYFQERPDATGRQSLTILQKCTAAIRQMAYGTTPDLFDEYIKLV"
ORIGIN      
        1 atggataaag ctttcaaaat gttagagttt cttgtggatg attcggatga cgaaaagatt
       61 gttagttttg ttaaaagtct aacgcaagaa gaagtcgatg gagaggcaag tagttctcga
      121 gtccctcgat cccggattta tattgttagg gatcgagaag atgcggctat aaggttatac
      181 aatgataatt ttgcggagtc accggtgttt tccgacaaat attttaaacg acgttttcga
      241 atgagtcgtg agttatttct tcgaattgtt gaaggtatat ctaattttaa tagtgttgtt
      301 attcctgatt attttatgta ttttcaggaa cggcccgatg caacgggccg tcaaagtttg
      361 acaattctcc aaaagtgcac agcggccata cgtcaaatgg cgtatggaac aactcctgat
      421 ttgtttgatg aatatataaa actagtttaa
//
LOCUS       XM_071831221            1956 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840983), mRNA.
ACCESSION   XM_071831221
VERSION     XM_071831221.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1956
                     /gene="LOC139840983"
                     /note="uncharacterized LOC139840983; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840983"
     CDS             1..1956
                     /gene="LOC139840983"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687322.1"
                     /db_xref="GeneID:139840983"
                     /translation="MGLQESKMMRLNLARLRSIWGNHNFDYAVSLSRGFSGGLISMWD
                     PNAFVKSNIWCDPNFLIVKGLWVRENIVTFMINVYAPQPLSDKIVLWNKLANFMENHT
                     GDYILFGDWNSVRREDERCGSEFLQQDADCFNNFIESSGLHEVPLGGMRYTWRNKPGN
                     KLSKLDRFFISNNVLVGVDDIKGVVLPRGFSDHSPIFLFQDNFDYGPTDPNLNIVAKL
                     RLLKVIIKDWIHTSRTSECLRLKEVTNLINDLDINIDSGNADEATVVTRNNLFKEKVD
                     LSKLNALDMLQKSRIKWDVEGDENSKFFHCSLKIKRGQQQIQGLMIDGNWVAVAEFNE
                     VRPHYILSNAEASFLEREFEDDEIKRAVWDCGCSKAPGPDGFSFRFIKHFWDILQHDI
                     CRDIRKFFANFSMPNGANSAFFSLIPKCFGDTWCRWIMGCLNSARTSVLVNGSPTREF
                     SIERGLRQGDPLSPFLFLIVMEGLHLTFQRAMEINFIRGVSVGANRIHLSHFLYADDD
                     IILSRWSRQDLKRILTILEIFYLVSGLRINVSKSQIFGVRVEEADLNMFAAITGCRAG
                     SFPNMYLGIPIGTKNLVSNWGTLVDKFRAKLSGWKASLISSGGRLTLLKSVMGSLGIY
                     LFSLFKCPETILKQLESFSARFFLGWL"
     misc_feature    1..594
                     /gene="LOC139840983"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(13..15,235..237,328..330,334..336,496..498,574..579)
                     /gene="LOC139840983"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(13..15,574..576)
                     /gene="LOC139840983"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(235..237,334..336,577..579)
                     /gene="LOC139840983"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    <1363..1731
                     /gene="LOC139840983"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1375..1377
                     /gene="LOC139840983"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggggttac aagaatctaa aatgatgcgt cttaatttgg ctcggttaag atctatttgg
       61 ggcaaccaca attttgatta tgcggtaagc ttatctcggg gcttttcagg aggtttaatt
      121 tctatgtggg atccaaatgc gtttgttaaa agtaacatct ggtgtgaccc taatttcctg
      181 attgttaaag gtttatgggt gcgtgagaat attgtcacat tcatgattaa tgtttacgct
      241 ccacaaccac tttcggacaa aatcgtcctg tggaataagt tggctaattt catggagaac
      301 catacgggtg attatattct tttcggtgac tggaattcag ttagaagaga agatgaacgt
      361 tgcgggtctg aatttttgca acaagatgcg gactgtttca ataattttat cgagtcttcg
      421 ggccttcatg aagtccctct cgggggcatg cgatacacgt ggagaaataa accgggtaat
      481 aaacttagta aacttgatcg attctttatt tccaataatg ttcttgtcgg tgtagacgat
      541 atcaaaggcg tggtgttacc tcgtggtttc tcggatcatt ctcctatttt tctttttcaa
      601 gacaactttg attatggtcc tactgatcca aatttaaaca ttgtggccaa gttaaggtta
      661 ttaaaagtca tcatcaaaga ttggattcat acttcacgta cttctgaatg tctaagactt
      721 aaagaggtaa ctaatttgat aaatgatctc gatataaata ttgactcagg caacgctgat
      781 gaggccactg ttgtgactcg taataatctt tttaaagaaa aagtcgattt atcgaagttg
      841 aatgctcttg acatgttgca aaaatcgaga attaaatggg acgtggaggg ggacgaaaac
      901 tcaaaatttt ttcattgctc tcttaaaatc aaacgtggtc aacaacaaat tcaaggtttg
      961 atgattgatg gtaactgggt agcggttgcc gagttcaatg aggttcgtcc tcattacatt
     1021 ctgtccaatg ccgaggccag ttttcttgaa agggagtttg aagacgatga aattaaacgg
     1081 gcagtttggg attgcgggtg ttcaaaagct ccgggtcctg atggtttttc ttttcgattc
     1141 atcaagcatt tttgggatat tctacaacac gatatttgta gagatattag aaagtttttt
     1201 gctaattttt ctatgcctaa tggtgctaac tcggctttct tttctcttat cccgaagtgt
     1261 tttggtgata cttggtgtag gtggattatg ggttgtctca attcggctag aacttccgtg
     1321 cttgttaatg ggtcgccaac cagggaattc agtatcgaaa gaggcctacg acaaggtgat
     1381 cctcttagtc cttttctttt tcttattgtt atggaaggtc ttcatttaac gtttcagcgg
     1441 gctatggaaa ttaattttat tcggggagtt tcggttgggg caaacagaat tcatctttct
     1501 cattttttgt atgcggatga cgatattatt ctttcccgtt ggagtagaca agatctgaaa
     1561 aggatcctta ctattctaga aattttctac ttggtctcgg gtttacggat aaatgtttca
     1621 aagtcgcaaa tatttggtgt cagagtcgaa gaggcagatc tcaatatgtt tgcggcgata
     1681 actggatgca gggcgggttc attcccgaat atgtatctag gtattcctat tggaactaag
     1741 aacttggttt cgaattgggg tactttggtg gacaaatttc gagctaaact ttctggttgg
     1801 aaggctagtt taatttcttc gggtggcaga ctgactcttc tcaaatccgt catgggtagt
     1861 ctcggtattt acctcttttc tctttttaaa tgcccagaaa ccatcctgaa acaattagag
     1921 tcatttagtg ctcgtttttt tttggggtgg ttgtaa
//
LOCUS       XM_071831222             951 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840984), mRNA.
ACCESSION   XM_071831222
VERSION     XM_071831222.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..951
                     /gene="LOC139840984"
                     /note="uncharacterized LOC139840984; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139840984"
     CDS             1..951
                     /gene="LOC139840984"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687323.1"
                     /db_xref="GeneID:139840984"
                     /translation="MWVSVIKSIHGNVFNKTEGNSVWTSIVRLCSKTVDDNLLPPNLI
                     CMDVGNGRSVKFWHDLWCGDSCLASRYNRLFHLDVNKNDSVADKWVNGDWQWVWSREE
                     IGSRNLALLNSLRHEINQVFICEREDKWVFSPASDGLFSVKKTRDIIDSRNLITSNTS
                     TVWFKFIPRKVNVFLWRFRLNALPLRWNLSAKGIEINSIVCPVCNNGVEDLSHLFFGC
                     SFALDIWYKSRLWMDCGFPSLHSWDDLFSWFGASSFTNGMKDKVIGIVVTILWALWRF
                     RNGIVFNESFSSRSSLFDVIRLLSFRWLKNRGHRVSNWNT"
     misc_feature    418..672
                     /gene="LOC139840984"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtgggttt cagttattaa gtcgattcat ggtaacgttt tcaataagac agaaggtaat
       61 tccgtttgga catcgattgt tcgcttatgt tctaaaactg tcgacgataa tttgttgcct
      121 cccaatctca tttgcatgga tgtgggaaat gggaggagtg tgaaattttg gcatgatctt
      181 tggtgcggtg attcatgttt agcttctcgg tataatcgtt tatttcatct agacgtaaat
      241 aaaaatgact cagtcgcaga taaatgggtt aatggagatt ggcaatgggt gtggtctaga
      301 gaagaaattg gtagtcgtaa tcttgcgcta ttaaattctc ttcgtcatga gatcaatcaa
      361 gtttttattt gcgaacggga agataaatgg gtgttttctc cagcgtcgga cggtttattc
      421 tcggtgaaga aaacacggga tattatagat agcagaaacc ttattacttc gaacacttct
      481 acggtttggt ttaaatttat cccccgaaaa gtgaatgttt ttttgtggag gtttagactg
      541 aatgctctcc ccttgcgttg gaatctctcc gcgaaaggta tagagattaa ttcgatcgtg
      601 tgtccggttt gtaacaacgg tgtggaggat ctttcgcatc tgttttttgg gtgttcgttt
      661 gccttggata tatggtataa gtctcgactt tggatggatt gtgggtttcc tagcttgcat
      721 tcgtgggacg atttattttc atggtttggt gcgtcttctt ttactaacgg gatgaaagac
      781 aaagttattg ggattgtggt caccatttta tgggctcttt ggcgattcag gaacggcatc
      841 gtgtttaacg aaagtttttc tagtagaagt agcctttttg atgttattag attactttct
      901 ttccgttggc ttaaaaacag aggtcataga gtttcaaatt ggaacacttg a
//
LOCUS       XM_071831223            1341 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840986), mRNA.
ACCESSION   XM_071831223
VERSION     XM_071831223.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1341
                     /gene="LOC139840986"
                     /note="uncharacterized LOC139840986; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139840986"
     CDS             1..1341
                     /gene="LOC139840986"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687324.1"
                     /db_xref="GeneID:139840986"
                     /translation="MVLSIRNTTTNRALEAIDVLDELSDNEEVEQIPRAPRRYLHRDR
                     QGRALALWNDYFSDNPTFPDDYFRILNFSQTPVPKYFSYFIQKRDATGLLGFNIVQKV
                     TSAIRQLAYAASADVFNEYLHMGEQTSYDCLNNFCKCIFHLYGPEYLRRPTAQDVQRL
                     TTKHAQIHGFLGMLGSIDCMHWRWRNCPARWKGHYTRGDHGYPSIMLEAVASYDGWFW
                     HAFFGTAGSNNDINVLNQSDLFSELLAGEAPPCTYTVNGCTFTKGYYLADGIYPEWSR
                     IVKSFKNSIDPKQKKFKRYQESARKDIERAFGILQGRWQIVQRPARPYYIRKIRRILL
                     SCVILNNMITEDNGRAFCGLEENYHLVRRPTRSFQERVEVHMRVDAEIREAGIHQLLK
                     HMLVEHIHNLPPNYRIRHDPTRNPNNQEDAGPSHIPDDEDEEDHQEDQEDDDEE"
     misc_feature    439..1044
                     /gene="LOC139840986"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggtattat cgatcagaaa tacgactacg aatcgagcac tcgaagccat tgacgtgcta
       61 gatgaattaa gtgataacga agaagtagaa caaataccac gggcacctag aagatattta
      121 catagagatc gtcagggtcg tgcattggct ttatggaatg attatttctc cgacaatccc
      181 acatttccgg acgattattt tcgtatattg aacttttctc aaactccggt tcctaaatat
      241 tttagttatt ttattcaaaa acgtgatgct accggattac ttggttttaa tattgttcaa
      301 aaagtaacat ccgccatacg tcaactagct tatgccgctt cggccgatgt ttttaatgag
      361 tatttgcata tgggtgaaca aacctcatat gattgtttaa acaatttttg caaatgtatt
      421 ttccacttgt acggtcccga atatttgaga cgaccaactg cacaagatgt gcaacgtttg
      481 accactaaac atgctcaaat acatggtttt ctggggatgt taggaagtat tgattgtatg
      541 cattggagat ggagaaattg tccggcacgt tggaagggtc attatacacg aggtgaccat
      601 ggttacccgt caattatgct tgaagcggta gcatcatatg atggatggtt ttggcatgcg
      661 ttttttggaa ctgccggatc aaacaatgat atcaacgtgc taaatcaatc cgacttgttt
      721 agtgagttat tagccggtga agcaccacca tgtacgtata cggttaacgg atgtacgttt
      781 actaagggtt attatttggc ggatggaatt tacccggaat ggtctagaat agttaagtcg
      841 ttcaaaaatt cgatagaccc gaaacaaaaa aaattcaaaa ggtatcaaga atcggcaaga
      901 aaagatattg aacgagcatt tggaatacta caaggccgat ggcaaattgt tcaacgtccg
      961 gcacgacctt attatatccg caaaattaga aggattttgt tgtcatgtgt gatattaaat
     1021 aatatgataa ccgaggacaa cggccgtgca ttttgtggac tcgaggagaa ttatcatctg
     1081 gttcgacgac ctacgagatc attccaagaa agggttgaag tgcatatgcg agtggacgcg
     1141 gaaataagag aagcgggcat tcatcaacta ctaaaacata tgcttgtaga acacatacat
     1201 aatcttccac caaattatcg catacgacat gatccaacaa gaaatccaaa caaccaagaa
     1261 gacgccggac cttcacacat tcccgatgac gaggatgaag aagatcacca agaagatcaa
     1321 gaagacgacg atgaagaata g
//
LOCUS       XM_071831224             855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840988), mRNA.
ACCESSION   XM_071831224
VERSION     XM_071831224.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..855
                     /gene="LOC139840988"
                     /note="uncharacterized LOC139840988; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139840988"
     CDS             1..855
                     /gene="LOC139840988"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687325.1"
                     /db_xref="GeneID:139840988"
                     /translation="MDQSRYWIQNQGTNCFKSQSFGDSWEEQAFAEDAAGPLGGCIWP
                     PRSYTCSFCRREFRSAQALGGHMNVHRRDRARLKQISSPKNNQVVEPNTSSLERCLLQ
                     NPNEICNPKFDDLDHPLFSSSSTRPNTVSILRPFTCSFGDKQQKSTKITPMLSFMSKF
                     DPQKRLHIDELGNQEKGCATQAIESNSITSKSDTYDHTEVRFADNLISLVKKRYETPI
                     FHENDDEHDGLIFKKRRIHDDVQSFFPNSTNIVIGDEIESVHVPLKRSPNSTLENLDL
                     ELRLGDRP"
     misc_feature    142..216
                     /gene="LOC139840988"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 atggatcaat caagatattg gatccaaaac caaggaacca attgttttaa atcgcaatct
       61 tttggagatt cgtgggaaga acaggcattc gcggaagatg cagccggccc acttggaggt
      121 tgtatatggc ctccaagatc ttatacttgt agcttttgta gaagggaatt tcggtcggct
      181 caagctcttg gcggtcacat gaacgttcat cggagagata gggctagact taagcagatt
      241 tcaagtccaa aaaataatca agttgttgaa cctaatacat ctagtttaga aagatgtctg
      301 ttacaaaacc ctaatgagat ttgtaaccct aaatttgatg acttggatca tcccctcttt
      361 tcatcttctt ctacaagacc taatacagtt tctattcttc gtccgttcac ttgttctttc
      421 ggtgacaaac aacaaaagag cacaaagatc acccctatgt tgtcattcat gtccaagttt
      481 gatcctcaaa agagacttca tatagatgaa ttaggtaacc aagaaaaggg ttgtgccaca
      541 caagctatcg agtcaaattc gattacttca aagagtgata cttacgatca taccgaggtt
      601 cgtttcgcag ataacttgat ttcacttgtt aaaaaaagat atgagacacc tatctttcat
      661 gaaaatgatg atgaacatga cggtttgatc ttcaagaaaa ggcgaataca tgatgatgtg
      721 cagtcttttt ttcctaatag tactaatatt gtaattggtg atgaaattga atcggttcat
      781 gtgcccctta aacgtagccc gaattctacg ttagagaatt tggatcttga gctgaggctt
      841 ggtgatcggc cttaa
//
LOCUS       XM_071831225            2568 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840989), mRNA.
ACCESSION   XM_071831225
VERSION     XM_071831225.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2568
                     /gene="LOC139840989"
                     /note="uncharacterized LOC139840989; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840989"
     CDS             1..2568
                     /gene="LOC139840989"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687326.1"
                     /db_xref="GeneID:139840989"
                     /translation="MFATITAPVMAGKSVPIFDGTDFTTWKLKLLWYLGSIHDKMERV
                     LTERPIIPGKWTEEVSNVDGTVVKPVEFIQTPRTQWAEQDAILYRLDSKIRSIIGNAI
                     SVPILRTVGHAETAKAMWDILLNDFEGVTVVKTQKKKNFVRLNENFTAEPKESLFDLH
                     SRFQVLVNDLEGAGVIKTKAEFCQKFVDALSETFEFIITSMVVSEKLDNYDLSGLFGI
                     FTNFEETKLKKINAKKIAKDPDVVLVATTKTNKELFSSYSTKAESDEESGDSSEDEEF
                     QMLEEQMALLTQRIEKKKFRPRKGKSPFDLKKATCFKCGKVGHIAVECSSKVDSSSDS
                     ETWDDEDSLSDEEEEDKCLMAVIEQEKSSSQFEADLKIAEKLNSQSNSDKSTAYKVQN
                     FIHYVDNEKISMFQYLLNKFKSCLDKNKRLKSELNDLKAIVKEKDLHISETEQCRIEL
                     AAYKSSFNKEIIRFDDEKRKIRERANKYEKICKSWCVSSKKNYDVIARQILADIKAVL
                     GVGFDLKNDTGIEKDPNRFKPVILHNTFLKVDGDKQYLTNAFVRPESGFIYSTETISG
                     SGVTDSNSESGSSDSKIDSIKQNDTMISEITHDSKSEKQKCFKVKAITKLKRRISKLC
                     KKLKDKPKVKTESDKPKSPEKNERKWFLDSGCSRHMTGCKEHLEGFVEEKGPSVRYGD
                     NSVGKTIGYRSVKAGGVTLKRVALVEGFMHNLLSVSQVADEEWLVRGLPQLSYKKDKV
                     CSACVKGKQIKAHFHSKTITTIDEPLHMLHMDLFGPMNIGSLSGKKYTLVIVDEYSRL
                     TWVIFLYAKSDAPEEIINLIKKEQVQKGKLAKQLKSDHGTEFKNATLVDFCKSVGIG"
     misc_feature    283..>603
                     /gene="LOC139840989"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    928..972
                     /gene="LOC139840989"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
     misc_feature    2293..2562
                     /gene="LOC139840989"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgtttgcta caattactgc tcctgtcatg gcaggaaaaa gtgttccaat ttttgatggt
       61 actgatttca caacctggaa actaaagtta ctttggtatc tgggttctat tcatgataaa
      121 atggaaagag ttctaactga aagaccaatt attccaggca aatggactga agaagtaagt
      181 aatgttgatg gtactgtggt caaacctgtt gagttcattc aaactccaag aactcagtgg
      241 gcagaacaag atgctattct ttatagatta gatagcaaaa tcagaagtat cattggcaat
      301 gcaatttctg ttcctatctt gagaacggta ggacatgctg aaactgcaaa agccatgtgg
      361 gatattctgc taaatgattt tgaaggggtc actgtggtta aaactcaaaa gaagaagaat
      421 tttgtaaggt tgaatgaaaa ttttactgct gaaccaaagg aatcattgtt tgatcttcat
      481 tcaagatttc aggtgttggt caatgatctg gaaggagctg gagttataaa gactaaagca
      541 gaattctgcc aaaagtttgt tgatgcactt tcagaaactt ttgaatttat catcacctca
      601 atggtagtaa gtgagaagtt ggataattat gatcttagtg ggttatttgg gatcttcaca
      661 aattttgagg aaaccaaatt gaagaaaatc aatgctaaga agatagccaa agatccagat
      721 gttgttttag ttgcaacaac caaaacaaac aaagaattat tttcaagcta ttctactaag
      781 gctgaatcag atgaagaaag tggtgactct tcagaggatg aagagtttca aatgcttgaa
      841 gaacagatgg ctcttcttac tcaaaggatt gaaaagaaaa agtttagacc taggaaagga
      901 aaaagtcctt ttgatcttaa gaaggctact tgttttaagt gtggaaaggt tggtcacatt
      961 gctgttgagt gttcgtctaa ggttgattct agttcagact ctgaaacttg ggatgatgaa
     1021 gattcattat ctgatgaaga agaagaagac aagtgtttga tggctgttat tgaacaggag
     1081 aagtcatcta gtcaatttga agctgatttg aaaattgctg agaaacttaa tagtcaatca
     1141 aatagtgata aatctactgc ctataaggta caaaatttta ttcactatgt tgataatgaa
     1201 aaaataagca tgtttcagta tttgttgaat aaatttaaat catgcctaga taaaaacaaa
     1261 aggttaaaat ctgaactaaa tgatcttaaa gccatagtta aagagaaaga tttacacata
     1321 agtgaaacag agcaatgtag aattgaattg gcagcataca aatctagttt taataaggag
     1381 attataagat ttgatgatga gaaaaggaaa attagagaaa gagcaaataa gtatgaaaaa
     1441 atttgtaaat cttggtgtgt atcatctaag aaaaattatg atgttatagc taggcaaata
     1501 cttgcagata ttaaggctgt gcttggtgta ggttttgatc ttaagaatga tactggaatt
     1561 gaaaaggatc caaatagatt taagcctgtg attttacata atacttttct taaggttgat
     1621 ggtgataagc aatacttaac aaatgctttt gttagaccag aatcaggatt catctatagc
     1681 actgagacta tatcaggatc tggagttaca gactcaaatt cagagtctgg atcatcagac
     1741 tctaaaatag actcaatcaa acaaaatgat actatgatct cagaaataac acatgattct
     1801 aaaagtgaaa aacaaaagtg ttttaaagtc aaagctatta ctaaactaaa aaggaggatt
     1861 tcaaaactct gcaaaaagct aaaagataaa cctaaagtca aaactgagtc agacaaaccc
     1921 aagagtcctg aaaaaaatga aagaaaatgg tttttagata gtggatgctc aagacacatg
     1981 acaggatgca aggagcatct tgaagggttt gtagaagaaa aaggtccctc tgttagatat
     2041 ggggataatt ctgttggtaa gactattggg tatcgatctg tcaaagctgg tggtgttact
     2101 ttaaaaagag ttgctcttgt agaaggattc atgcataatc tgttgagtgt gagtcaagtt
     2161 gctgatgaag aatggttggt aagagggctg ccacaactct cctacaagaa ggataaagtc
     2221 tgctctgctt gtgttaaggg taaacaaatc aaagctcatt ttcactctaa gactataact
     2281 acaattgatg aaccacttca tatgcttcat atggacctct ttggacctat gaacattggt
     2341 agtttgagtg gtaagaagta tactctggtg attgttgatg aatactccag gctcacatgg
     2401 gtaattttct tgtatgctaa aagtgatgca cctgaagaaa tcattaactt gattaagaag
     2461 gagcaggtac aaaaaggcaa gctggccaaa caattaaaaa gtgatcatgg aacagagttc
     2521 aagaatgcta ctcttgttga tttttgtaaa agtgttggta ttggttaa
//
LOCUS       XM_071831228            2790 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840990), mRNA.
ACCESSION   XM_071831228
VERSION     XM_071831228.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2790
                     /gene="LOC139840990"
                     /note="uncharacterized LOC139840990; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840990"
     CDS             1..2790
                     /gene="LOC139840990"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687329.1"
                     /db_xref="GeneID:139840990"
                     /translation="MHKRTVTLKWDHLDDVNDNDDDEFFESTNRLSVVVPLDMPLLEF
                     DEDNDDQEFNDARVSFSQNLASNSFKKPQNLASNAQYDMWMVAPGSITDRRRKLLQGM
                     GLTSNKDFARLPSTTSTKFNKAYTKRLVSTKPPDSTSQDTNKKETSPNLEESKKADRK
                     QSKRQQQAEVQPQTKVKPQPKPEPEQHPQPKHKLEVDTEPEPKPQPKDQDQEQDQAYD
                     SSLPLLLVRSRSDSDIETTSYNIKRRKQDMIGSISKQRLTRTSSELIRPSVGLSCRYA
                     NILRVSTANTKKPKNSLANNASNTNSHAQLDSFFVIKNLDTGKEFVVKDFNDEGMCNK
                     VSDLQTGKQLTMDEFEKTVGHSPVVKELMRRTSRKKNVNSKLAMTNSYVSKSFRYSKK
                     KGAALLKNLKGSMSGSKSDKEKEKDGRDQKPKEEPKSNEEQKPNDKNANSKWVKAKAH
                     GKPLKEFSALNVCQEIQAHDGSIWTMRFSFDGQYLASGGEDKVIHVWEVQECDVMSMQ
                     SGDEMGSSTTPDNRPPIPDNSTTAPEKKKKPKNNKNKSGIPDYVKVPESMFGLSENPV
                     CTFKGHQDDVLDLSWSRSQLLLSSSMDKTVRLWDVETKNCLKQFAHSDYVTCIQFNPT
                     DDDYFISGSLDKKIRMWSVPSRKVVDWSDLHDMITAVCYYPDGQGAIVGLHNGNCKPY
                     NTTDCKLEQKDQIELHTKPKAEPKKITGFQFSPSNASEMLVTSADSRVRIMDGPHVIE
                     KLIGYKNTSSQFSAQYSADGKYIFCASEDSQVYIWKHEKPKNSGGAKPKYVTTTSYEH
                     FPCTDVTVALPWHGTSKLNQLDNEPQSKRRSKKSGPLPTDNNVETKKSKLPPVPKKGT
                     NDNSEQTTNTDASVGESGDGSLQTDGGNNVAAAASSAQSTVWGLVIVTAGVGGEIKVY
                     QNVGLPVKVGYQTLF"
     misc_feature    <460..>639
                     /gene="LOC139840990"
                     /note="Procyclic acidic repetitive protein (PARP); Region:
                     Trypan_PARP; pfam05887"
                     /db_xref="CDD:368653"
     misc_feature    <514..1347
                     /gene="LOC139840990"
                     /note="MSCRAMM family adhesin clumping factor ClfB;
                     Region: MSCRAMM_ClfB; NF033845"
                     /db_xref="CDD:468203"
     misc_feature    1390..2328
                     /gene="LOC139840990"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cl29593"
                     /db_xref="CDD:475233"
     misc_feature    order(1405..1407,1459..1461,1471..1473,1489..1494,
                     1528..1530,1633..1635,1645..1647,1663..1668,1711..1716,
                     1762..1764,1777..1779,1795..1800,1834..1836,1888..1890,
                     1903..1905,1921..1926,1960..1965,2014..2016,2026..2028,
                     2044..2049,2089..2094,2170..2172,2179..2181,2197..2202,
                     2236..2241,2293..2295,2305..2307,2323..2328)
                     /gene="LOC139840990"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    1417..1539
                     /gene="LOC139840990"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1555..1833
                     /gene="LOC139840990"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1846..1950
                     /gene="LOC139840990"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1975..2103
                     /gene="LOC139840990"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2122..2229
                     /gene="LOC139840990"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    2251..2352
                     /gene="LOC139840990"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 atgcacaaaa gaacggtaac attaaaatgg gatcatttag atgatgtcaa tgacaacgac
       61 gatgacgaat tctttgaaag caccaaccgt ctctcggtcg ttgttcctct tgacatgcct
      121 ttacttgaat tcgacgaaga caatgatgac caagaattta acgacgcacg cgtgtctttt
      181 tcccaaaact tggcctcgaa ttcgttcaag aaacctcaaa acttggcctc caatgcacaa
      241 tatgacatgt ggatggttgc accggggtca attactgacc gaagaagaaa gcttctacaa
      301 ggcatggggt taactagcaa taaagatttc gctcggttac ctagtacaac tagcaccaaa
      361 tttaacaaag cgtataccaa aagattggtt tcgacaaaac ctcccgattc tacttctcaa
      421 gacacaaaca aaaaagaaac gtcaccgaat ttagaagaat ctaaaaaggc agatcggaaa
      481 caatctaaac gtcagcaaca agctgaggtt cagccgcaga ctaaagttaa gcctcagcct
      541 aaacccgagc cagagcagca tcctcaacct aaacataaac ttgaggttga tactgagcct
      601 gaacctaaac cacaacctaa ggatcaggat caggaacagg atcaggctta tgattcctcg
      661 ttgcctttat tgttggttcg ttctagatct gatagtgaca tagaaacaac ttcatataac
      721 ataaaacgtc gaaaacagga tatgattgga tctatatcaa aacaacgtct tactagaaca
      781 tcatctgaac taataagacc gtctgttgga ttatcgtgtc ggtatgccaa catacttaga
      841 gtttcaaccg ccaacactaa gaaaccaaaa aattcgttag cgaacaatgc cagtaatact
      901 aactcgcacg cacaattaga ttctttcttc gtgatcaaaa atctcgatac gggtaaggag
      961 tttgtagtta aagactttaa cgatgagggg atgtgtaata aagtgagtga tttacaaacc
     1021 ggaaagcaac tcacaatgga tgaatttgag aagaccgttg ggcattcgcc tgttgtgaag
     1081 gaactgatgc gtagaacgag ccgcaagaaa aacgttaaca gcaaattggc catgactaat
     1141 tcttatgtta gcaagagttt cagatatagt aagaagaaag gggctgcact tctgaaaaac
     1201 ttaaagggtt caatgagcgg atcgaaatca gataaagaaa aggaaaagga tggcagagat
     1261 caaaaaccca aagaagaacc gaaaagcaat gaagaacaga aacctaatga caaaaacgca
     1321 aattcaaaat gggtgaaagc taaagcgcat ggaaagccgt taaaggaatt ttcagcgttg
     1381 aatgtatgtc aagagatcca ggctcacgat ggatcgattt ggaccatgag atttagtttc
     1441 gacggtcaat atttggcgtc aggtggtgag gacaaagtta ttcatgtttg ggaagtgcaa
     1501 gaatgtgatg tcatgtcgat gcagtcagga gatgaaatgg gttcaagtac tactcctgat
     1561 aataggccac caatacctga taattcaaca acggcccctg aaaagaagaa aaaaccgaag
     1621 aacaataaaa ataaatcagg gattcctgat tatgttaaag tgcccgaaag tatgtttggg
     1681 ttatcggaaa accccgtttg cacattcaaa ggtcatcaag atgatgtctt ggacctatct
     1741 tggtcaagat ctcagctcct gctttcgtca tccatggaca aaactgtaag gttatgggat
     1801 gttgaaacca agaactgttt gaaacagttt gcacacagtg attacgtgac ttgtatacag
     1861 ttcaatccaa cagatgacga ttacttcata agcggttcgt tagataaaaa gattagaatg
     1921 tggagtgtac cgagtcgaaa agtagtggat tggagtgatc ttcatgacat gataactgct
     1981 gtatgctatt atcctgatgg ccagggtgcc attgttggat tacacaacgg aaattgtaag
     2041 ccgtataata ctacagattg caaactcgag caaaaggatc aaattgagtt gcatactaaa
     2101 ccgaaagcag agccaaaaaa gattacaggt ttccagtttt ctccatcaaa cgcatctgaa
     2161 atgttagtta cgtctgctga ttcacgtgta agaatcatgg atggacccca tgtcatcgaa
     2221 aaactcatag gttacaaaaa tacaagcagt caattttcag ctcaatatag tgcagacggg
     2281 aagtacatat tttgtgctag tgaagattca caagtataca tttggaagca tgaaaaacct
     2341 aaaaatagtg gtggtgctaa gccaaaatat gtaaccacta cttcttatga acacttccca
     2401 tgcaccgatg ttaccgttgc actaccatgg catggaacca gcaaacttaa ccagttagac
     2461 aatgaaccac aatccaaacg acgctctaaa aagtcgggcc cgctacctac agacaacaac
     2521 gtggaaacta aaaaatcaaa gttgccgcca gttcctaaaa aaggtacaaa tgacaattca
     2581 gagcaaacta ctaacaccga cgcaagtgtt ggtgagtctg gtgatggttc gttgcagaca
     2641 gatggtggta ataatgttgc ggcggccgcc agcagtgcac aatcgacagt gtgggggttg
     2701 gtgattgtga cggcaggggt gggtggtgag attaaggttt atcagaatgt tgggttgcct
     2761 gttaaggttg ggtatcaaac tctgttttaa
//
LOCUS       XM_071831229             513 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840991), mRNA.
ACCESSION   XM_071831229
VERSION     XM_071831229.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..513
                     /gene="LOC139840991"
                     /note="uncharacterized LOC139840991; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840991"
     CDS             1..513
                     /gene="LOC139840991"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687330.1"
                     /db_xref="GeneID:139840991"
                     /translation="MAFLDLEKAYDSVPRELIWKILNGRVLDELSQRIQGSISWCLIL
                     ADDIVLVLESQDELNRRLEQWRNTLEQNGLRISRLKSEYLRCDYRRIEEDHNDTVDIR
                     IGDQVLHPQDSFRYLGSMLHKSGRINEDVTHRIRVGWLKWRAAKGLLHLTEFMVLSGR
                     GSLGSSLSAL"
     misc_feature    <1..363
                     /gene="LOC139840991"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(13..30,130..132,136..141,349..354)
                     /gene="LOC139840991"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(13..30,136..138)
                     /gene="LOC139840991"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggctttct tagacttgga aaaagcttat gatagtgtcc cacgggagtt gatttggaag
       61 atccttaatg gtagagtctt agacgagcta tctcaaagga tacaagggag tatctcttgg
      121 tgcttgattt tagccgatga tatagtttta gtattggaat cccaggatga gctaaacaga
      181 aggctagagc aatggaggaa taccctggaa caaaatggac ttcggattag tagacttaaa
      241 tcggagtatc ttagatgtga ctacaggagg attgaagaag atcacaatga tacagtggat
      301 attcgtattg gggatcaggt cttacatcca caggattcct ttagatactt aggatcaatg
      361 ctacacaaat cgggaaggat aaatgaggat gtgacccacc gtataagggt aggatggttg
      421 aagtggagag ctgcgaaagg gttacttcac ttaacagaat tcatggttct ttctggtcgg
      481 gggtctttag gaagcagcct ctctgccctc tag
//
LOCUS       XM_071831230            1113 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative cyclin-D7-1
            (LOC139840992), mRNA.
ACCESSION   XM_071831230
VERSION     XM_071831230.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1113
                     /gene="LOC139840992"
                     /note="putative cyclin-D7-1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139840992"
     CDS             1..1113
                     /gene="LOC139840992"
                     /codon_start=1
                     /product="putative cyclin-D7-1"
                     /protein_id="XP_071687331.1"
                     /db_xref="GeneID:139840992"
                     /translation="MAHLITPCNVLNNHKNGFSMDDTNDQFLMCDEVWDMSPVTSYGS
                     YNDAYEYDHHMHRKNNHIDDNSIHPITKHEVEHWFDTCLRKELKYMAGSEFVNILESN
                     RFVSNCRMKAFQWFIQSQRRFNCCMGTVFKGMNYLDRFIDSNQCNGWSNWMMELLSLG
                     CLSIALKFGETCPPSLHEIQDGLEYNYEPRLVQKMEMKILKVLRWELNSITPHTYVEL
                     INWELKSILKPLVLDDLSSRFNDVVLASSLDVKMLRYRPSVIAMSGLKCVVVKDQEYC
                     LSHITSFIPTGQEKNLQSCYKTMQEILVRSHKLEANGNPSSPDTVLAKEPVTIREQQV
                     DLCFIDGPATDMMNKLKRKRYGDQDEWVVNHKKCVN"
     misc_feature    322..615
                     /gene="LOC139840992"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
     misc_feature    628..897
                     /gene="LOC139840992"
                     /note="second cyclin box found in plant cyclin-delta
                     family; Region: CYCLIN_AtCycD-like_rpt2; cd20544"
                     /db_xref="CDD:410247"
ORIGIN      
        1 atggctcatt tgatcactcc atgcaatgtt cttaataatc ataaaaatgg tttcagtatg
       61 gatgatacta atgatcagtt tcttatgtgt gatgaagtgt gggacatgag tccagtaact
      121 tcttatggtt cttataatga tgcatatgaa tatgatcatc atatgcaccg aaaaaataat
      181 catatcgatg ataattcgat tcacccgatt acaaaacatg aagttgagca ctggttcgat
      241 acttgtttac gaaaagaact caagtatatg gcaggatcag aatttgtaaa tatccttgaa
      301 tcgaatcgtt ttgtttcaaa ttgtagaatg aaagccttcc agtggttcat ccaatctcaa
      361 aggaggttta attgttgtat gggaaccgtg tttaagggga tgaattatct tgatcgtttt
      421 atcgattcaa atcaatgcaa tggatggagt aattggatga tggagttgtt gtctttgggt
      481 tgtttatcta ttgctcttaa gtttggtgaa acttgtcctc catcattgca tgaaattcag
      541 gatggtttgg agtacaatta tgaaccaaga ttagttcaga aaatggaaat gaagatattg
      601 aaggttttaa gatgggaact taattctatt actcctcata cgtacgtcga attgatcaat
      661 tgggaattga aatccattct taaaccgctc gttcttgatg acttgagttc aaggtttaat
      721 gatgttgttc ttgcatcatc ccttgatgta aaaatgctta gatatagacc aagtgttatt
      781 gcgatgagcg gactcaaatg tgtcgttgtt aaagatcaag aatattgtct ttcccacatc
      841 actagtttca ttccaacagg tcaagaaaaa aatctacaat cttgctacaa aacgatgcaa
      901 gaaatcttgg ttcgatctca caaattagaa gcaaatggga acccttcgag tcctgatacg
      961 gtattagcca aggaaccagt gactatacgc gaacaacagg ttgatttatg ttttattgat
     1021 ggacctgcaa ctgatatgat gaataaactc aagaggaaga gatatggtga tcaagatgag
     1081 tgggttgtga accataagaa atgtgtcaat taa
//
LOCUS       XM_071831231             546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840994), mRNA.
ACCESSION   XM_071831231
VERSION     XM_071831231.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139840994"
                     /note="uncharacterized LOC139840994; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139840994"
     CDS             1..546
                     /gene="LOC139840994"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687332.1"
                     /db_xref="GeneID:139840994"
                     /translation="MKFSLLHLFFLPSLFFHGTTFGAIICEDLTNNNCSFAISSSGKR
                     CVLEDFQDTKGKVAYQCRTSEVMVENMAGYIETNECVRACGVNRNATGISSDALLDKH
                     SVVTLCSPACYQHCPNIVDLHFNLAIGEGVSLPDLCEQQRTNPDCSMIQLLSSNVPAD
                     GPVASYKHHRKFSVAPAPFSF"
     misc_feature    70..534
                     /gene="LOC139840994"
                     /note="PAR1 protein; Region: PAR1; pfam06521"
                     /db_xref="CDD:399493"
ORIGIN      
        1 atgaagtttt ctttgcttca tctctttttt cttccatctc tattctttca tggaaccacc
       61 tttggtgcga ttatatgcga agatctgact aacaacaact gttcgtttgc gatttcttca
      121 tctggaaaaa gatgtgtgtt ggaggatttt caagatacga aagggaaagt tgcgtatcaa
      181 tgtcgaacat cagaagttat ggtggaaaac atggcgggat acattgagac gaatgaatgt
      241 gttagggcgt gcggtgttaa caggaatgct acaggtattt catccgatgc gttgcttgat
      301 aaacactcag tcgtcactct ttgctcccct gcgtgttacc aacattgccc taacatcgtc
      361 gatcttcact tcaatttagc cattggtgaa ggcgtatcgt taccagatct atgtgagcaa
      421 cagcgaacta atcctgattg tagcatgatt caacttttaa gctcgaatgt tcctgcggat
      481 ggtccagtgg caagttacaa gcaccatcgc aagtttagtg tggccccagc cccattttct
      541 ttctag
//
LOCUS       XM_071831232            1437 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine carboxypeptidase-like
            45 (LOC139840995), partial mRNA.
ACCESSION   XM_071831232
VERSION     XM_071831232.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..1437
                     /gene="LOC139840995"
                     /note="serine carboxypeptidase-like 45; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139840995"
     CDS             <1..1437
                     /gene="LOC139840995"
                     /codon_start=1
                     /product="serine carboxypeptidase-like 45"
                     /protein_id="XP_071687333.1"
                     /db_xref="GeneID:139840995"
                     /translation="FNISIMSSGIWIHNTKLLYVIILMHAYLNVVKSNPDSDEVVSLP
                     GQPPVSFKQYAGYITVDEAKERSLFYYFVEAESDPSSKPLVLWFNGGPGCSSVGAGAF
                     MEHGPFKPSGNVLLKNDFSWNKEANMLYLEAPVGVGFSYTVEKTVVNDVTTAGDNLAF
                     LEKWLEKYPEYQNRDFYITGESYGGHYVPELATLVVHSKPKINLQGIAIGNPLLEFDT
                     DFNSRGEYLWSHGLISDASYDLLNKVCNFSTIRRQYNFKSLTPTCSHVDDHALNEIGE
                     FVNYYDVTLDVCLSTVLSQSQVLKHNQHLDKKVDVCVEEETVKYLNREDVQTALHARL
                     EGVNKWTICSETVNYDMKSMEEPMTPVLVSLLNSGIKIFIYSGDQDSVLPLTGTRVVV
                     NGVANQLGLKPTLPYRAWFSGNQVGGWTQVFGDVLSFATIRGAAHEAPFSQPERSLAL
                     FRGMLSGKPLPSAEEVDLKTKTNPSSLD"
     misc_feature    130..1371
                     /gene="LOC139840995"
                     /note="Serine carboxypeptidase; Region: Peptidase_S10;
                     pfam00450"
                     /db_xref="CDD:459815"
ORIGIN      
        1 ttcaacatct caatcatgtc atctgggata tggatccaca atacaaaact attgtacgta
       61 ataattttaa tgcatgcata tttgaatgtg gtgaaatcca atccagattc tgatgaggtt
      121 gtttcgttac ccggtcaacc gcctgttagt ttcaaacaat atgcaggtta cataaccgtt
      181 gatgaagcca aagaaagatc tcttttctat tactttgttg aagccgaatc tgatccgtcg
      241 tccaaaccac ttgttctttg gtttaatgga gggcctggtt gttcctctgt tggagcaggg
      301 gcttttatgg aacatggtcc atttaaacca agtggcaatg ttttgttgaa aaatgatttt
      361 agttggaata aagaggcaaa tatgttgtat ttggaagcac cggtaggagt tggattctct
      421 tatactgttg aaaaaacagt tgtgaatgat gtcactacag ccggcgacaa tcttgctttt
      481 cttgagaaat ggttggaaaa atatccggag taccaaaata gagacttcta cattactggc
      541 gaaagttatg gaggacatta tgtccctgaa ttggcaactc ttgtagttca ctcaaaaccc
      601 aagatcaatc tccagggaat cgctataggt aatccacttt tggaattcga tacggatttt
      661 aattcaagag gagagtatct ttggtctcat gggttgattt cggatgctag ttatgacttg
      721 ttgaataaag tatgcaactt ttcaactatt agaagacaat acaatttcaa gtctctcacc
      781 cctacttgct ctcatgttga tgatcacgct ttaaacgaga ttggtgaatt cgtgaactat
      841 tatgatgtca ctctcgacgt ctgtttgtca actgttctct cacaatcaca agttctcaaa
      901 cataatcaac atctagataa aaaggtagac gtttgtgtgg aggaagaaac agtgaaatac
      961 ttgaaccgag aagatgttca aactgctctt catgctcgcc ttgagggtgt caacaaatgg
     1021 accatttgta gcgagactgt taactatgat atgaagagta tggaagaacc aatgactcct
     1081 gtattggtct cccttcttaa ctctggcatt aagattttta tttacagtgg tgatcaagat
     1141 tcggtcctac ctttgaccgg gacacgagta gtggtcaatg gtgtggctaa tcagttagga
     1201 ctgaaaccaa ctctaccgta cagggcatgg ttcagtggca accaggttgg tggatggaca
     1261 caagtgtttg gtgatgtttt atctttcgca acgattagag gggcagcaca cgaagctcca
     1321 ttttcgcaac cagaacgttc gcttgctctt ttcagaggaa tgctgagcgg aaaaccgttg
     1381 ccgtcagctg aagaagtcga tctaaagacc aaaaccaatc cttcttcatt agactaa
//
LOCUS       XM_071831234             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139840996), mRNA.
ACCESSION   XM_071831234
VERSION     XM_071831234.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139840996"
                     /note="uncharacterized LOC139840996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139840996"
     CDS             1..846
                     /gene="LOC139840996"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687335.1"
                     /db_xref="GeneID:139840996"
                     /translation="MGFGEKGRKWILTCLKSASVSVLVNGSPTHEFRLERRIRQGDPL
                     SPFLFIIASEGLNILTKQAVHSGLFRGTSIVKTGQNFGKSFIRVIGNGGDTSFWEDAW
                     LTDQPLKLTFARLYHMERNQAAKVQDRITWAANEPQILWDWIREFQGRAHADLLTLMN
                     LLFSYVKQDRTLDAWYWNLSSNGIFTTKKLSRLIDDITILDNRSRTETMKNNLVPLKL
                     EVFIWRTMRRRLPTKTELDKRGIDLDSVRCPLCDDDVESIDHSLFLCRHSYEVWDRVF
                     KWWGF"
     misc_feature    <88..>189
                     /gene="LOC139840996"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    121..123
                     /gene="LOC139840996"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    <631..813
                     /gene="LOC139840996"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggggtttg gcgaaaaagg gcgaaagtgg atattaactt gtcttaagtc ggcttcggta
       61 tccgttcttg taaatggctc cccaacacat gaatttaggc ttgaaagaag aattcgacaa
      121 ggggatcctc tatctccttt tctctttatc atagcgtcag aaggattgaa tattctcaca
      181 aaacaagccg tacatagtgg tctttttaga ggtacgagca ttgtcaaaac agggcagaat
      241 tttgggaaat cgtttatcag agtaattggc aatggaggtg ataccagctt ttgggaagac
      301 gcgtggctta cagaccaacc attgaaactg actttcgcta gattatacca tatggaacgc
      361 aatcaagcag ccaaggtcca ggatcgaatt acctgggctg caaacgaacc gcaaattttg
      421 tgggactgga ttcgagaatt tcaaggacgt gcacatgctg atttattaac actaatgaat
      481 cttttgtttt cttatgttaa acaggacagg acccttgatg cgtggtattg gaatctatca
      541 tcgaatggca tttttacaac caagaaacta tcgagactaa tagacgacat cactattttg
      601 gataatagat cgagaactga aactatgaaa aacaatttgg taccattgaa gcttgaagtg
      661 tttatatgga gaactatgcg aagaaggcta cctacaaaga ctgaacttga caaacgtgga
      721 attgacttag actccgtaag gtgcccgcta tgtgatgatg atgtggaatc aattgatcac
      781 tcattgttcc tttgtcggca ttcttacgaa gtttgggacc gagttttcaa atggtgggga
      841 ttttga
//
LOCUS       XM_071831235             408 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutathione S-transferase
            T3-like (LOC139840997), mRNA.
ACCESSION   XM_071831235
VERSION     XM_071831235.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..408
                     /gene="LOC139840997"
                     /note="glutathione S-transferase T3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139840997"
     CDS             1..408
                     /gene="LOC139840997"
                     /codon_start=1
                     /product="glutathione S-transferase T3-like"
                     /protein_id="XP_071687336.1"
                     /db_xref="GeneID:139840997"
                     /translation="MKIEVSKEGLSQRNQTKWLSLKEAWLAQCWVDASEDSCKGNSQK
                     YVLLWATIYNKFNNNPNGWQRGDDQLSSKWRNINQACGAFQGAYNKAKRNWRSGDNDQ
                     GVEDQAHQIYANNNKGKRFIMMDVWRVLSNKSK"
ORIGIN      
        1 atgaagatag aagtttcaaa ggaaggtcta agtcaaagaa atcaaacaaa atggttgagt
       61 ctaaaagaag cgtggttggc tcaatgttgg gtcgatgcgt cggaggattc ttgcaaggga
      121 aattcacaaa aatatgtatt gttgtgggct acaatttaca acaaattcaa caacaaccca
      181 aatggatggc aaagaggtga cgaccaattg tcgtcaaagt ggcgtaacat caaccaagcg
      241 tgtggtgcgt ttcaaggtgc ttacaacaaa gccaaacgca attggagaag cggtgacaac
      301 gatcaaggtg tcgaagacca agcacatcaa atctatgcaa ataataacaa agggaaaagg
      361 tttatcatga tggatgtttg gcgtgtattg agtaacaagt caaagtga
//
LOCUS       XM_071831236            1200 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative mannan
            endo-1,4-beta-mannosidase 9 (LOC139840999), mRNA.
ACCESSION   XM_071831236
VERSION     XM_071831236.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1200
                     /gene="LOC139840999"
                     /note="putative mannan endo-1,4-beta-mannosidase 9;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 12 Proteins"
                     /db_xref="GeneID:139840999"
     CDS             1..1200
                     /gene="LOC139840999"
                     /codon_start=1
                     /product="putative mannan endo-1,4-beta-mannosidase 9"
                     /protein_id="XP_071687337.1"
                     /db_xref="GeneID:139840999"
                     /translation="MSENGGLNCDCNTESYPSIVKGGYVETSEQSFVINGKPLYFNGF
                     NAYWLMCMAADPSSKSKVTDAFEQASKLGMNVVRTWAFSDGGNKPLQTSPGVYNENMF
                     KALDFVISEAKKHGLHLILSLVNNWDDFGGKKQYCQWAKDEGQYLSSDDDFFSNDVTR
                     GYYKNHVKSILKRHNTITGVAYKDDPTIFAWELMNEPRCQSDLSGKTLEDWIVEMAAE
                     VKSIDNKHLLECGHEGFFGESIPDMKQYNPGYEVGTDFASNNLDKNVDFATIHIYPDQ
                     WVSGGSAEDQAEFVEKWIESHIEVCKTILKKPLLIAEFGKSSWSSGYTVEARDEYFEK
                     IFNMAYESASKDGSCSGTTFWQVFGEGMDNWGDGYQVVLEQSPSTAAIIGKQSQKIAS
                     LNSPLEM"
     misc_feature    100..1101
                     /gene="LOC139840999"
                     /note="Endo-1,4-beta-mannosidase [Carbohydrate transport
                     and metabolism]; Region: COG3934"
                     /db_xref="CDD:443135"
ORIGIN      
        1 atgtcggaaa atggtggcct caactgtgat tgcaacactg aaagctaccc atcgatcgtt
       61 aagggtggtt atgtagagac atctgaacag agtttcgtga ttaatggcaa gccgttgtac
      121 tttaacggct ttaatgcata ctggttaatg tgtatggctg ctgatccatc ttcgaaaagt
      181 aaggttaccg atgcttttga acaagcttca aaacttggta tgaacgtcgt tagaacttgg
      241 gcgtttagtg atggcggcaa caaaccgttg caaacctctc ctggtgttta caatgagaat
      301 atgtttaagg cattggattt tgtgatatca gaagctaaaa aacatggttt acacttgatt
      361 ctgagcttgg ttaataactg ggatgatttt ggaggtaaga aacaatattg tcaatgggct
      421 aaagatgaag gtcaatactt gagtagtgat gatgatttct tttctaatga tgtcactaga
      481 ggatactaca agaatcatgt taagagcatc cttaagaggc acaacacaat tactggtgtt
      541 gcgtacaagg atgatcccac tattttcgca tgggagctca tgaacgaacc ccgttgccag
      601 tctgatctat ctggaaaaac acttgaggat tggatagtgg aaatggctgc ggaagtgaaa
      661 tccatagaca acaaacatct tcttgaatgt ggtcatgaag gcttttttgg tgaatcgatt
      721 cccgatatga aacaatataa tccaggttat gaagttggga ctgattttgc ttcaaacaac
      781 ctcgacaaaa atgtcgattt tgctacaatc catatctatc ctgaccaatg ggtatcagga
      841 ggaagtgcag aagatcaagc tgaatttgtg gagaaatgga tcgagtccca tattgaggtt
      901 tgcaaaacaa tcttgaaaaa acctttattg attgctgaat ttggaaaatc gtcatggtct
      961 tcgggttaca ctgtggaagc aagagatgaa tacttcgaaa agatcttcaa tatggcttac
     1021 gaaagtgcaa gtaaagatgg ttcttgttcg ggtacaacgt tttggcaagt ttttggagaa
     1081 ggaatggata actggggtga cggttaccaa gttgtgttgg agcaaagccc gtcgactgct
     1141 gctataattg gcaagcagtc gcagaagatt gcttcactca actcgcccct agaaatgtaa
//
LOCUS       XM_071831238            3330 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841000), mRNA.
ACCESSION   XM_071831238
VERSION     XM_071831238.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3330
                     /gene="LOC139841000"
                     /note="uncharacterized LOC139841000; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841000"
     CDS             1..3330
                     /gene="LOC139841000"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687339.1"
                     /db_xref="GeneID:139841000"
                     /translation="MWQPPTTETKKKCTFKQFLECKPPEYVGSSNQLKPLIGYMRLLK
                     KKAMGWWDSITSQMSKEMLNQVTWEQFAAKVCEQYCTPYEISRMKREFMNLKMTRQMT
                     IDEVIEKFTDKLRFVQQWLPDEQSKIDQFVEMILPEYRSLVRMAPSLPQAFAIAKMVE
                     GDTKAAKDSQNEMVMQPKQTSSQGSFKSKKSHGGQQKGRFSQSGSSSNQRVWCNGCKS
                     THAGPWHRSVDCPSARKMSSGVGAGVRTTSVGGSSASSTGQKCKTPPRPEARAFQMSV
                     DAATTADDAITGMFLVNSTPARVLFDCEANRSFMATRFYDKLNLPVSMLPESLEVEVA
                     SGKTVPVTTSMSGLSIEIDRSVFPVTCLVMPIPSFDVVLGMNWLSRHKASINCDKKII
                     YFPLADGTCAVARGERGGFNCPLISMMKAKKLLAKGCDSFLAYVIDAKKEKKTVADIP
                     VVRDFPEVFPDELLGLPPVREVEYRIDLMPGSTPVAKAPYRLAPSEIRDMMTQIQDLL
                     DRGFIRPSSSPWVAPFLGHVICQEGIKVDPSKIEAVMKWNAPKTLTEIKSFLGLAGYY
                     RRFIKDFSKIAGPLTKLTRKDVSFQWGDEQEKAFQTLKQLLCQAPILALPKGTDDFMV
                     YCDASYVGLDCVLMQREKLIAYASRQLKTHEKNYPVHDLEMAAVVFALKLWRHYLYGT
                     HCVICTDHKSLQYIFSQKELNMRQRRWQELIKEYDCEIRYHPGKENVVADALSQKGSI
                     DNVKFMRIEIVSDLIERLKMTQLEALRDEHLKSELLVKRKKDLIDDSRGLKTFNNRIW
                     VPLLGELRELIMNEKDIAHFVEKCHICAQVKAEHQNPYRSLRQLEIPKWKWEHITMDF
                     VTKLPRTQKGHDMIWVIVDRLTKSAHFLPASETTSLSKLAQLYINEVVVWHGIPLSIV
                     SDRDSRFLSNFWQSLQQNLGPEIVQQTADKVAIAREKLKAARDRQKMYADPRRRPVTF
                     SVGERVYLKVSPWKGVIRFGKRGKLAPRYIGSFNIRQILNDQTVVLDLPAELAVIHDT
                     FNICYLRKCKVENESEILPLQDLKVDMNKNLVKEPVRVVDRKVTRLRKKQIPMWGMRF
                     PHYEETPIEYILIDYKDQDKA"
     misc_feature    148..399
                     /gene="LOC139841000"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    805..1197
                     /gene="LOC139841000"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(904..906,910..912,916..918,991..999,1114..1116)
                     /gene="LOC139841000"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    904..912
                     /gene="LOC139841000"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    904..906
                     /gene="LOC139841000"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(991..1002,1012..1023)
                     /gene="LOC139841000"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1870..2205
                     /gene="LOC139841000"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty3; cd09274"
                     /db_xref="CDD:260006"
     misc_feature    order(1879..1890,1975..1983,1990..1992,2065..2067,
                     2164..2166)
                     /gene="LOC139841000"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260006"
ORIGIN      
        1 atgtggcagc caccaacaac tgaaacaaag aaaaagtgca cttttaagca attccttgaa
       61 tgcaaacctc cagagtatgt cggtagttct aatcaactga aacctttgat tggttacatg
      121 agattgttga aaaagaaagc aatgggttgg tgggattcaa taacttctca gatgtcaaag
      181 gaaatgttga accaggtgac ttgggaacaa tttgcagcta aggtgtgcga acagtattgc
      241 actccttatg agatctcaag aatgaagcgg gaatttatga atctaaagat gaccagacag
      301 atgacaattg acgaagtgat cgagaagttc actgacaagc ttcgctttgt acaacaatgg
      361 cttcctgatg aacaatctaa gattgatcag tttgtggaaa tgatcttgcc agaatacaga
      421 tcattggtaa gaatggcacc ttcgttacct caagcctttg ccatagccaa aatggtggaa
      481 ggagatacca aggcggccaa agatagtcaa aatgaaatgg tgatgcagcc caaacagaca
      541 tcaagtcaag gtagtttcaa atcaaagaag tctcatggtg gtcaacagaa aggaagattt
      601 tcccaaagtg gtagtagttc gaaccagagg gtgtggtgca atggttgtaa atcgactcat
      661 gcgggtcctt ggcacagatc agttgattgt ccatctgcaa ggaagatgag ttctggggta
      721 ggggcaggag taaggacaac gtcagtcggg ggatcttcgg cttcgtcaac tggacagaag
      781 tgtaagactc ctccaagacc tgaagcaaga gccttccaga tgtcggtaga cgcagctact
      841 actgccgacg atgctatcac cggtatgttt ttggttaact ctacacctgc tcgtgtattg
      901 tttgattgcg aagccaatcg ttcttttatg gctactagat tctatgataa gttaaacttg
      961 cctgtttcta tgttacctga atcgttagaa gtggaagtag ccagtggtaa gactgttcca
     1021 gtcacaacat ctatgtctgg attaagtata gaaatagata ggagtgtatt tccggtgact
     1081 tgcttagtga tgcccatacc tagttttgat gtagttcttg gtatgaattg gttaagtcgc
     1141 cataaggcaa gtataaattg tgataagaaa ataatttatt ttcctttggc cgatgggaca
     1201 tgtgctgtgg cccgaggtga acggggcggg tttaattgtc cgttaatttc aatgatgaaa
     1261 gctaagaaat tgttagccaa gggatgtgat tcgtttctag catatgtaat tgatgctaag
     1321 aaagagaaaa agacggtagc tgatattcca gtagtgcgcg acttcccaga agtatttcca
     1381 gatgaattac tgggtttgcc gccagttagg gaagtagaat acagaattga cttgatgcca
     1441 ggatctacac cagtggctaa agctccttat aggttagctc cgtccgagat tcgtgacatg
     1501 atgacgcaaa ttcaagattt gctagatcgt gggtttatac gaccgagttc atcaccatgg
     1561 gttgctccct ttctgggtca tgttatttgt caagaaggta tcaaagtgga tccatccaaa
     1621 atagaagcgg taatgaaatg gaatgcaccg aaaactctga ctgaaattaa gagttttctg
     1681 ggtttagcag ggtattaccg tagatttatc aaggatttct ctaagattgc tggtccatta
     1741 acaaagttaa ctagaaaaga tgtatctttt caatggggtg atgaacagga gaaagcattt
     1801 caaacattga agcagctatt gtgtcaagct ccgatattag cgctacccaa gggtactgat
     1861 gattttatgg tatattgtga tgcgtcatat gtgggtttgg attgtgtgtt aatgcagcga
     1921 gagaagctta ttgcgtatgc ttcgcggcag ttgaaaactc atgaaaagaa ttatccagta
     1981 catgacttag aaatggcagc agtggttttt gctttgaagc tatggagaca ttatttatac
     2041 ggtacgcact gcgttatttg tacagatcac aagagtttac agtatatctt ttctcagaaa
     2101 gagttgaata tgcggcagag acggtggcaa gaattaataa aagaatatga ttgtgaaatc
     2161 cgctaccatc cgggtaagga aaatgttgtc gctgatgctt taagccaaaa aggatccatt
     2221 gacaatgtga aatttatgcg aattgaaatt gtatcggatc tgattgagcg attaaagatg
     2281 acgcagttag aagccttgag ggatgaacat ttaaaatctg agcttttagt taagagaaaa
     2341 aaggatttaa ttgacgattc tcgtggatta aaaactttca acaatcgaat atgggttcct
     2401 ttactcggag aattgaggga attaattatg aatgagaaag acatcgcgca ttttgtggaa
     2461 aaatgtcata tttgcgccca agttaaagct gaacatcaaa acccctatag atcattacgt
     2521 caattagaaa ttccaaaatg gaaatgggaa catataacaa tggattttgt aactaagtta
     2581 ccccgaactc agaagggaca tgatatgatc tgggtgattg ttgatcgatt aaccaagagc
     2641 gcacactttt tgcctgctag tgaaacgaca tcgttgagta aattggctca gctgtacata
     2701 aatgaagttg tagtttggca tgggatacca ttatctattg tgtcagatag ggattcgaga
     2761 tttttatcta acttctggca gagtttacaa caaaatttgg gtcctgaaat tgtacaacaa
     2821 accgctgata aagttgcaat agctcgagag aagttaaaag ctgctagaga tagacagaaa
     2881 atgtacgcag atcctcgtag acgaccagtg acattttctg tgggtgaacg tgtgtacctg
     2941 aaggtatcgc cgtggaaagg tgtaattcgt tttggtaaac gcggaaaatt agctccaagg
     3001 tatataggtt catttaacat caggcagata ttgaacgatc aaaccgtggt tctggatctt
     3061 cctgcagagt tagctgttat tcacgataca tttaacatat gttatcttcg taagtgcaag
     3121 gtagaaaacg aaagtgagat tctgccattg caggacttaa aagttgacat gaataaaaat
     3181 ttagttaaag aaccagtcag ggttgttgac agaaaggtta cgaggttacg taagaaacag
     3241 ataccaatgt ggggaatgag gtttcctcac tatgaagaaa ccccaattga atatatactc
     3301 attgattaca aggatcaaga taaggcttga
//
LOCUS       XM_071831239            1227 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At2g26850-like
            (LOC139841001), mRNA.
ACCESSION   XM_071831239
VERSION     XM_071831239.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1227
                     /gene="LOC139841001"
                     /note="F-box protein At2g26850-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139841001"
     CDS             1..999
                     /gene="LOC139841001"
                     /codon_start=1
                     /product="F-box protein At2g26850-like"
                     /protein_id="XP_071687340.1"
                     /db_xref="GeneID:139841001"
                     /translation="MISHKFYSIKNGVISSKIETLEEKYDFCLLDLPDLPLECILEKL
                     SPTGLVKMSGVCKSLRTMCTQDLLWEKHLNKKWGKFLIGDSVYKEWHAYIDNKKKQKL
                     KDCSNGKGYFGFFTTIFWWKKNVKLNNTCICLPVDSIMSWYLSLENGNFSFPAQVYNR
                     ENGNVGFLLSCYDAKVSYDSQTDSFKARYSAHGRPTTEENIKWERLRSPIVDASPYDL
                     YVSDCLNDLKPGDHFEIQWRKSKEFPYGWWYGVVAHLESCDGNKLYCQCHRSDTVILE
                     FKQYSRGSRWREVMIDRKDHREVGNETEGFYAGIRKLYNHNEISMWKGLWPTQPLD"
     misc_feature    <118..228
                     /gene="LOC139841001"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
ORIGIN      
        1 atgatatccc acaaatttta ttcaataaaa aatggtgtca tcagttcaaa aattgaaact
       61 ttagaagaaa aatatgattt ttgtttattg gatttgcctg atttgccctt ggaatgcatt
      121 cttgaaaagc tttcacctac tgggttggtt aagatgtctg gggtatgtaa atccttgagg
      181 actatgtgta cacaagacct tttatgggaa aaacatttga acaagaaatg gggtaaattc
      241 ttgataggtg actctgtata taaggaatgg catgcataca ttgacaacaa aaagaagcaa
      301 aagcttaaag attgctcaaa tggaaaaggg tattttgggt tttttactac catcttttgg
      361 tggaagaaaa atgtgaaatt gaacaacacg tgtatatgtt tgcctgttga ttcaatcatg
      421 tcttggtatc tttcacttga aaatggcaat ttttcattcc cagctcaagt ttacaacaga
      481 gagaatggaa atgttgggtt cttgctgtca tgttatgatg caaaagttag ttatgattca
      541 cagaccgata gtttcaaggc caggtactcg gcacatggta ggccaacaac agaggaaaat
      601 attaaatggg aaaggcttag atcaccaata gtcgatgcat caccatatga tctttatgtt
      661 tcggattgtt tgaatgattt gaaaccagga gaccactttg agattcagtg gaggaaatct
      721 aaagagtttc catatggttg gtggtatggt gttgttgccc acttggaatc atgcgatgga
      781 aacaagcttt attgccaatg tcatcgtagt gacacggtga tattggagtt caagcagtac
      841 agtcgagggt caagatggag ggaagtaatg atagaccgaa aggatcatcg agaagtaggc
      901 aatgaaactg aggggtttta tgcaggcatc aggaaactgt acaatcacaa tgaaatctcg
      961 atgtggaagg gtctttggcc gactcaaccg ttagactaat atgtaagtaa acggggttcg
     1021 gttagattta atctgtaacc cattagtgtg tcaactggct tcctcctttt caaatgtaaa
     1081 tataaggtta aggtacatga ttagtaggtt cctagagatg atacatctgg catcatatat
     1141 tgttgctcga ggcgcaaagt tgtaaaagtg tatgtaacaa atagaaagat ggtccagctg
     1201 tacaaaacgc ttaggctgat gtgtatt
//
LOCUS       XM_071831240             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841002), mRNA.
ACCESSION   XM_071831240
VERSION     XM_071831240.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139841002"
                     /note="uncharacterized LOC139841002; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841002"
     CDS             1..606
                     /gene="LOC139841002"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687341.1"
                     /db_xref="GeneID:139841002"
                     /translation="MSVEKATETDDVIISMFLINSIPARILFDYGANKSFMSLDFCAK
                     LNLPATVLPEPVRLEVGDGKITCHNVCDWADGTSVIARGERGGYNFPLISMMKAKKSL
                     SKGCESFLAYVVDGKKEKKSIADILVVSEFPEVFPDELPGLPPIREVEYKIELVPGAT
                     PVAKAPYHLAPSEIHEMMSQIQELLDRGFIRPSSTPRGAPE"
     misc_feature    1..>213
                     /gene="LOC139841002"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(85..87,91..93,97..99,172..180)
                     /gene="LOC139841002"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..93
                     /gene="LOC139841002"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..87
                     /gene="LOC139841002"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(172..183,190..201)
                     /gene="LOC139841002"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgtcagttg agaaggctac tgaaactgac gatgtgatca tcagtatgtt tttaatcaac
       61 tcaatacctg ctcgtatatt gtttgattat ggtgcgaata agtcttttat gtcgttagac
      121 ttttgtgcta aattgaattt acctgctact gtgctgcctg aaccggttag attagaggta
      181 ggagatggaa agatcacatg tcacaacgtt tgtgactggg ctgacggaac cagtgttata
      241 gcccgagggg aacgaggtgg gtataatttt ccattgatat caatgatgaa agctaagaaa
      301 tccttatcca aagggtgtga atcgttccta gcttatgtag tagatggtaa gaaagaaaag
      361 aaatcaatag ccgatattct ggtagtttca gagtttccgg aagtgtttcc agacgagtta
      421 ccagggttac cgccgataag agaagtagag tataagattg aattggtgcc tggagccact
      481 ccagttgcca aagccccata tcatttagcg ccttcagaaa ttcatgagat gatgtcacaa
      541 attcaggagc tattggatcg tgggtttatt agaccgagtt ctactcctag gggtgcacca
      601 gaatag
//
LOCUS       XM_071831241             951 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841003), mRNA.
ACCESSION   XM_071831241
VERSION     XM_071831241.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..951
                     /gene="LOC139841003"
                     /note="uncharacterized LOC139841003; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841003"
     CDS             1..951
                     /gene="LOC139841003"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687342.1"
                     /db_xref="GeneID:139841003"
                     /translation="MWSSLANFVGSFDTDWVICGDFNEVRDESERKNCDFVDRRARWF
                     NEFINTSKLIEVPMGGKRFTRICDNGIIFGKLDRFLVSEKFWDTWGELSVLALERKLS
                     DHCPIVLRDAAIDFGPKPTKVFNEWLELEGSNKIISDCWNQPHHGLWLDCRFRNKLKS
                     VKIALKKWSQKKIGNIDNEVEVLAKKVAEWERMAEVRQLNDAERDEWLNTRRMWIEKD
                     KTRCSMAKQKSRVKWVMDGDENTKFFHSTLRRRYSKRNIRGLIINGVWNEDPIDIKHA
                     VFNHYVSLFKRQGMRRLKITDGCNQNLTNCISREQAAVLE"
     misc_feature    <49..327
                     /gene="LOC139841003"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgtggtcga gtcttgcgaa ttttgtaggt tctttcgata cggattgggt gatatgtggt
       61 gacttcaatg aagtgcgtga tgaatcggag agaaaaaatt gtgatttcgt ggatagaaga
      121 gcaaggtggt tcaatgagtt tatcaacaca tctaagctta tcgaggtccc catgggtggt
      181 aaaaggttca cccgtatatg tgataatggt ataatatttg gcaagttgga tagattcttg
      241 gtctcggaga aattttggga cacatggggg gaactctcgg ttcttgcgtt ggaacgtaaa
      301 ttatccgatc attgtccgat tgtacttcgt gatgcggcca ttgactttgg cccaaaacca
      361 acgaaagttt ttaatgaatg gctagaattg gaaggctcga acaaaattat ctcagattgt
      421 tggaaccaac ctcaccatgg actttggcta gactgcagat ttcggaacaa gctaaaaagt
      481 gtcaaaattg cactaaaaaa gtggagtcaa aaaaagattg gcaacattga caatgaggtt
      541 gaggttcttg caaagaaagt agccgaatgg gagcgaatgg ctgaagtcag acaattaaat
      601 gatgctgaaa gagacgaatg gctgaatact agacgtatgt ggattgaaaa ggacaagacc
      661 cgatgtagta tggcaaaaca aaaatcaagg gttaagtggg tcatggacgg ggatgaaaat
      721 accaagtttt ttcactccac cttgcgacga agatactcta aaaggaacat tcgtgggtta
      781 atcatcaatg gggtgtggaa tgaggacccg attgacatta aacatgctgt ctttaatcat
      841 tacgtgtcac tctttaaacg acaaggaatg cgacggctga agataaccga cgggtgtaat
      901 cagaacctga caaactgcat cagccgtgaa caggctgctg ttctcgaata g
//
LOCUS       XM_071831242             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841005), mRNA.
ACCESSION   XM_071831242
VERSION     XM_071831242.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139841005"
                     /note="uncharacterized LOC139841005; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841005"
     CDS             1..645
                     /gene="LOC139841005"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687343.1"
                     /db_xref="GeneID:139841005"
                     /translation="MAGEFAELISLMNSVVMVPDKIDSWRWTLSGNGIFITKILSDVI
                     TTKLLGAGTNCFETMRNDLVPKKVEVFVWRAKRRRLPVLSELNKRGIDLHSVRCPLCD
                     DDIETVDHFLFLCQDVLDIWAKVRNWWGLNGSSAFGIGDAFNGHSALQMTSLGAKIWQ
                     GVEWTCGYLIWKNRNQKVFKNKCWNPPVVLNEIQVKSFEWIAKRCRTKKIDWFT"
     misc_feature    <190..345
                     /gene="LOC139841005"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggctggtg agtttgctga gcttatcagt ttgatgaatt cggtggtgat ggtgccggac
       61 aaaatcgatt cgtggcgttg gacgttaagt ggtaatggta tttttataac taaaatcctt
      121 tctgatgtta ttacaacaaa actcctaggt gctggaacaa actgttttga aacaatgcgt
      181 aatgatttgg tacctaaaaa agttgaggtg ttcgtgtgga gggctaaacg gaggagatta
      241 cccgtgttgt cggaacttaa caaacgcggt atcgatcttc attcggttag atgccctctt
      301 tgtgatgatg atatagagac ggttgatcat ttccttttcc tatgtcaaga cgtgttagat
      361 atatgggcaa aagtgcgtaa ttggtggggt ttgaatgggt ctagtgcctt cggtattggt
      421 gatgccttta atggacattc ggcgcttcaa atgacttcat tgggtgcgaa gatttggcaa
      481 ggggtagagt ggacgtgcgg gtatctcatt tggaaaaatc ggaaccaaaa ggtttttaaa
      541 aacaaatgtt ggaatcctcc ggttgttcta aatgaaattc aagttaaaag ctttgagtgg
      601 atcgcgaaac gttgcaggac aaagaagatc gattggttta cttga
//
LOCUS       XM_071831243             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841006), mRNA.
ACCESSION   XM_071831243
VERSION     XM_071831243.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139841006"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841006"
     CDS             1..903
                     /gene="LOC139841006"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687344.1"
                     /db_xref="GeneID:139841006"
                     /translation="MSSFAREFSMKDLGDLNYFLGISVTRNTHGLFLSQEKYAEDIII
                     RAGMTTCKTVKTPVDTNGKISGTQGPSYSDPTEFRSLAGALQYLTFTRPDISYAVQQI
                     CLHMHDPKECHMQALRRIIRYVRGTLSHGLQLTRSSISSLVSYTDADWGGCPDTRRST
                     SGYCVFLGGNLVSWSAKRQPTVSRSSAEAEYRGVANVVSESCWLRNLLLELHCPVSKA
                     TIVFCDNVSAIFLSGNPVQHQRTKHIEMDIHFVREKVARGQVRVLHVPTQFQIADIFT
                     KGLPRALFEEFRNSLNVRSLSRSN"
     misc_feature    <13..174
                     /gene="LOC139841006"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    433..843
                     /gene="LOC139841006"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(439..450,553..561,568..570,670..672,748..750,
                     829..831)
                     /gene="LOC139841006"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtcctctt ttgcacgtga attttccatg aaagatttgg gggatcttaa ctactttctc
       61 gggatctcag tcactcgaaa tactcatggt ctatttttaa gtcaggaaaa gtatgcagag
      121 gacatcatca ttcgagctgg aatgacaact tgcaaaaccg ttaaaacgcc ggttgatacg
      181 aatggtaaaa tcagtggtac gcaaggtcca tcatattctg atccaaccga atttagaagt
      241 ctagctggcg ccttacaata cttgacgttt acgagacccg atatctccta tgcggttcaa
      301 caaatctgtc tccatatgca tgatccgaaa gagtgtcata tgcaagcttt acgtcgtatc
      361 attcgttatg tgcgtggtac tctctctcac ggcttacagc tcactcgaag ctccatctcc
      421 tccttagtct cttacacgga cgctgattgg ggtgggtgtc ctgatacacg tcgttcgaca
      481 tccggttatt gtgtttttct cgggggtaat ttagtatcgt ggtctgctaa acgccaacct
      541 actgtttccc gttctagtgc cgaagccgaa tatcgaggtg ttgcaaatgt tgtgtctgaa
      601 tcatgttggc tacgcaatct tttgttagaa ctccattgtc cggtgtccaa ggctactatt
      661 gttttttgtg ataatgttag tgcgattttt ctttccggca atccagtgca acatcaacga
      721 acgaagcata tagagatgga tattcacttt gttcgtgaaa aagtcgccag agggcaagta
      781 cgtgttcttc atgttccaac acagtttcaa attgcagaca tatttaccaa ggggttacct
      841 cgtgccttgt ttgaagaatt tcggaacagt ttaaacgtcc gctcgctctc ccgctcaaac
      901 tga
//
LOCUS       XM_071831244            5631 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841007), mRNA.
ACCESSION   XM_071831244
VERSION     XM_071831244.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5631
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5631
                     /gene="LOC139841007"
                     /note="uncharacterized LOC139841007; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139841007"
     CDS             1..5631
                     /gene="LOC139841007"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687345.1"
                     /db_xref="GeneID:139841007"
                     /translation="MATTDIASSSNSIPKGSFENVPLADLFNGPITFYSATAPTTDGR
                     TRVFCGLKLNETALQPAYILEPAQKKGKRQPQKHPFNMARPDITSSSTNIPKDSFQNV
                     SLADFLNGPLTFDSTTVPTADGRTRTFCGLKLNETPLRPGRFQNVSFPDLCSGPITFY
                     SEPFPTTDGRTRMFCGLKLNETTLEPGTPVSYYYQGPPAHKCRNCDATMWYAERNNKP
                     KHTRNPSFSMCCQSGKVLLPKLNEPPTLLKNLLDYNDPTGAKFREQIRIYNSMFSFTS
                     FGAKIDHSVNRGRGPYTFRISGQAYHKIGSLLPEGGRPKYAQLYFYDTQNEVKNRMSA
                     FVGDDSRTTIDETLTRNLIAMLDESSAVAQAFRMARDWSANNTMSDCGLRLLAKVTIS
                     RQYNTPNVAEVAALITGDFGHCNSTRDIIVQKKNNTPQRISELHQLYMALQYPLLFPY
                     GETGYHEEIPYHTNSGRRQTTRGHVTMREYYCYRIQQRESEGTTILRGGRLFQQYLVD
                     AYTAVEEQRLKWLRHHQNELRLDLYSNVCDAVTRGDTSATSIGKRIILPSSHTGSPRY
                     MVQNYQDAMALCREYDNPDLFITFTSNPRWPEVDTMISYIDGQKSADRPDIVARVFKM
                     KLDDLMADIMKKQIFGTCQAGIHIIEFQKRGLPHVHMLIWLISAHKCKTPAAIDDIIT
                     AEIPSEKDDPEGFRAVTEYMLHGPCGGVHMNAPCIIDRQCSKHFPKPYCTETTIDEEG
                     YANYRRRNNGVRFTKNNTPLDNSSVVPYNRYLLLKYNAHINVEWCNRSRAIKYLFKYL
                     NKGPDRATIVIQENLIPGDESSGDKVIDVDEIKNYLDCRYLSPCEAVWRLFSFDIHYS
                     KPSVIKLSYHLPNQQSITLHDSQKLPALLQRESIKETMFTQWFELNKQDEFARTLTYA
                     KIPTHYVWNQDAKIWSPRKLRTCIGRIVYSNPASGERYYLRMLLNIVKGPRCFEELRT
                     VNGVLHRTFKDACFAYGLVNDDKEWTEAISEAKIWATGSQLRELFVTMLLFCNISKPL
                     QLWESSWEALSDDILHKRRKLFNFPDLILTESQIKNYCLLELQALLNRNGKSLDDYPD
                     LPQPDPSMLTQMDNRLIREELNYNIKEMHLLHENLFRSLNPEQLTIYQRVIDAVTTKK
                     GGLFFLYGPGGTGKTFLYNTVLAKLRSERLIVLAVASSGIASLLLPGGRTAHSRFVIP
                     LELMENSTCGIKQKTHLAALIQEVSLIIWDEAPMTQRHAFEALDKTLRDILGAKDDAN
                     RFKLFGGMPILLGGDFRQILPVVTKGKRQEVVHACINRSDLWEHCELHTLSRIMRVNE
                     HTVDGQIDARKRTFNQWVLDIGEGKVPALCKDGEDEPTWIRIPAEFIVKSDKPPIEAI
                     VDTIFPNFISSQEDEDYLRERAILTPRNDDAAEINKHMFKKLQGAKMTFKSSDEICKG
                     STDNIDQHYSYPVEFLNKLNFPGVPPHKLKLKIGQPVMLLRNISPSTGMCNGTRLIIT
                     DFTKFVLHARIITGSHIGKMVIIPRIVLTSTEKKWPFVMQRIQFPVRPCYAMTINKSQ
                     GQSLKLVGLYLPKPVFSHGQLYVALSRVTDPDGLKIVMMDDRNPRLRVNRHNANYIRT
                     VTSFYIRSAPFEQPGKYPPPDHWSHLLMNTTMLQHNAQFMDLPCKFSFYSYVYSCIDP
                     GGFSPGFIQDSNPVRLSLGMFKGSGSFFFSTSVVYILYSILHFLTYNQPIIRKKKKKS
                     SNRSQERIEDLYQEIEREPVCRQFYVERIRRIMHICVILHNMITEENGRAMCDLEENY
                     RPARRPRRSIEKRVQAYIRANKELRDSTIHQLLRQKLIEHIWNLPENCRLRHVPQVGP
                     SGTTENDDQDEDEAEDEDDEENEDEDDECDEDDE"
     misc_feature    1441..1989
                     /gene="LOC139841007"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    3379..4488
                     /gene="LOC139841007"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(3466..3486,3700..3702)
                     /gene="LOC139841007"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
     misc_feature    <4630..4746
                     /gene="LOC139841007"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    4657..4659
                     /gene="LOC139841007"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggctacaa ctgatattgc atcatcttcc aacagtattc ccaaaggcag ttttgagaat
       61 gtaccccttg cagacttatt caatggccct ataacctttt actcagcaac tgcccctaca
      121 actgatggta gaaccagggt gttttgcggc ttgaagttaa atgaaacagc tctgcagcca
      181 gcctatatac ttgagcctgc ccaaaaaaaa ggcaagcgcc aaccccaaaa acatccattt
      241 aatatggcta gacctgatat tacatcatct tccaccaaca ttcccaaaga tagttttcag
      301 aatgtatccc ttgcagactt cctcaatggt cctttgacat ttgactcaac cactgtccct
      361 acagctgatg gtagaacacg gacgttttgt ggattgaagt taaatgaaac accccttagg
      421 ccaggccgtt ttcagaatgt ctcctttcca gacttatgca gtggtcctat aacattttac
      481 tcagaacctt ttcctacaac tgatggcaga acacggatgt tttgtggatt gaagttaaat
      541 gaaacaaccc tcgagccagg tacacccgtg tcttactatt accaaggacc tccagcccat
      601 aaatgccgta actgtgacgc tacgatgtgg tacgcagaaa ggaacaacaa acccaaacat
      661 acaagaaatc cgtccttctc aatgtgctgc caaagtggca aagtattgct accgaaatta
      721 aacgaacctc ccacattgtt aaaaaacctg cttgactaca acgaccccac gggcgcaaaa
      781 tttcgggaac aaataaggat ttataatagc atgttttctt tcacgtcgtt tggtgctaag
      841 atcgaccact ctgtcaaccg gggtcggggt ccttatacat ttcgtataag tggtcaagca
      901 taccataaaa tcggttcact tttaccagag ggtggccggc caaaatacgc acaattgtac
      961 ttttatgaca ctcaaaatga agtaaaaaac cgtatgtctg ctttcgttgg tgatgattcc
     1021 cgcacgacaa ttgatgaaac ccttacacgt aacttgattg ccatgctcga tgaatcgagc
     1081 gctgtcgcac aagcttttcg tatggcacgt gattggtcag ctaacaatac aatgtcagat
     1141 tgtgggctcc gtttactcgc aaaggttaca atctcgcgcc aatataacac gccaaacgtc
     1201 gctgaggtcg ctgcgttgat taccggggac tttggccact gtaactcaac aagggatatc
     1261 attgttcaaa aaaaaaataa caccccacag cgcatatctg aacttcacca gttatatatg
     1321 gcattgcaat acccattgct atttccctat ggtgaaaccg gttaccatga agagatcccg
     1381 tatcacacaa acagtggcag aaggcaaaca acccgtggcc acgttactat gcgagaatat
     1441 tactgttacc gaattcagca acgggaaagc gagggcacaa caattcttag aggaggtcgg
     1501 ttattccagc aatacttggt tgacgcgtac accgccgtag aagaacaaag gttgaagtgg
     1561 ctacgacatc accaaaatga acttcggctt gatttgtata gcaatgtttg tgacgctgtt
     1621 acaaggggag atacatcagc cacttcaatt gggaaacgca ttattctgcc gtcctcgcac
     1681 acaggcagcc cacggtacat ggttcaaaac taccaggatg caatggcttt atgccgggaa
     1741 tatgataacc ccgatttgtt tatcactttc acttccaacc cgcgctggcc cgaggtcgat
     1801 acgatgatct cctatatcga tgggcaaaaa tcagctgacc gacccgacat tgtcgctcga
     1861 gtattcaaga tgaaactaga cgacctcatg gctgacataa tgaaaaaaca aatttttggc
     1921 acatgccaag caggtattca tatcattgag ttccagaaac ggggcctgcc acatgtacac
     1981 atgttaatat ggttgatctc tgctcacaaa tgcaaaacac ccgctgctat tgatgacata
     2041 ataacagctg agattccatc tgagaaagat gatccggagg ggtttcgggc cgttactgaa
     2101 tacatgttac atggtccgtg cggtggcgtc catatgaacg ctccctgcat tattgatcga
     2161 caatgttcca agcattttcc gaagccgtat tgtacagaaa ctacaattga cgaggaagga
     2221 tatgctaact ataggcgacg aaacaatggc gtcaggttca ctaaaaacaa cacccccctt
     2281 gacaacagct ccgttgtccc ctacaacagg tacctgttac taaaatacaa tgcccatatc
     2341 aacgttgagt ggtgtaatcg atctcgggca ataaaatact tattcaaata tttaaacaag
     2401 ggccctgatc gagcaacaat tgtcatccaa gaaaatctaa ttccgggtga tgagtccagt
     2461 ggagacaagg ttattgatgt tgatgagata aaaaattatc tagattgccg ttatttatcc
     2521 ccctgcgagg ctgtttggag actgttttcg ttcgacatcc actactctaa accatccgtc
     2581 attaagctgt cataccacct gccaaatcag caatcgatca ctctccatga ctcacaaaaa
     2641 ctgcctgcac ttttacaaag ggaaagtatt aaagagacga tgttcaccca atggtttgaa
     2701 ttgaacaagc aagatgagtt tgcacgtacc ctgacttatg caaaaatccc tacacattat
     2761 gtatggaatc aagatgctaa aatatggagc ccgagaaaac ttagaacctg catcggtcgc
     2821 attgtctact caaaccctgc atcgggggaa cgttactacc tgcgtatgtt actaaatata
     2881 gttaagggcc cccggtgttt tgaagaacta cgtacagtga acggtgtttt gcaccgaacg
     2941 tttaaagacg cgtgctttgc atatgggtta gtaaatgacg acaaggaatg gaccgaggct
     3001 atctcagaag caaaaatatg ggctacgggt tcacagctac gtgagttatt tgttactatg
     3061 ttactctttt gtaacataag caaaccgctt caactatggg aatcaagttg ggaggctttg
     3121 tcagacgaca tcttgcataa aagaaggaaa ctatttaact tccctgatct aattctgaca
     3181 gaatcccaaa ttaaaaatta ttgtctgttg gaattacaag ccttattaaa tagaaatggc
     3241 aagtccctgg atgattaccc cgacctacca cagcccgatc catctatgct aacccaaatg
     3301 gacaaccgtt taattcggga ggagctaaac tacaatataa aagaaatgca cctgctccat
     3361 gaaaacctgt tccgttcact caatcccgaa caactaacga tatatcaacg ggttatagat
     3421 gcagttacta caaaaaaagg aggcctcttt ttcttatacg gtcccggggg gactggcaaa
     3481 acattcctgt ataataccgt tctcgcaaaa ctaagatcag aaaggctgat tgttctcgca
     3541 gttgcatcct caggtattgc atctctccta ttgcccggcg gccggactgc ccatagccga
     3601 tttgtgatcc ccctagaact tatggaaaac agtacatgtg gaattaaaca aaaaacacac
     3661 ctagcggcgc ttatccaaga ggttagctta attatttggg atgaggctcc catgacgcag
     3721 cgacacgctt tcgaagcgtt agataaaaca ttaagagata ttttaggagc taaagatgat
     3781 gcaaacaggt ttaagttatt cggcggaatg cctatcttat tgggcggcga cttcagacaa
     3841 atactccccg ttgttacaaa aggtaaaaga caagaggtcg tccacgcgtg catcaataga
     3901 tcagatttat gggagcattg cgagcttcat acactttcgc gtattatgcg ggtcaacgaa
     3961 cacacagtcg atggtcaaat tgatgcccgc aaacgcactt ttaaccaatg ggttctagat
     4021 ataggtgaag ggaaggtccc cgcattgtgt aaagatggag aggatgaacc aacctggata
     4081 cgcatccccg ctgaattcat tgtcaaatct gacaaacccc ccattgaggc aattgtagac
     4141 acaatattcc caaacttcat tagtagccaa gaagatgaag attatctgcg tgaaagggca
     4201 attttgaccc ctagaaatga cgatgctgct gaaatcaata aacatatgtt caaaaaattg
     4261 caaggtgcaa agatgacgtt taaaagctcg gatgaaattt gcaagggctc aaccgacaac
     4321 atcgaccaac actattcata cccggttgaa ttcttaaaca agctaaattt ccccggcgta
     4381 cccccacaca aactgaaact caaaattgga cagccagtca tgctactacg caatatcagc
     4441 cctagcacag ggatgtgtaa tggcacacgc ctcatcataa ccgactttac caagtttgtc
     4501 cttcacgctc gaatcatcac tggatcacat atagggaaaa tggtcataat ccctagaata
     4561 gtccttactt caacagaaaa aaaatggccc tttgtcatgc agcgaatcca gttcccagtg
     4621 cggccatgtt atgcgatgac gataaacaaa agtcaagggc aatcgttgaa attagtaggc
     4681 ctatacctcc ctaaacctgt attcagccac ggtcaattgt atgtagctct ctcacgcgta
     4741 accgaccccg atggcctgaa aatcgtgatg atggatgaca gaaacccgcg cctccgtgtt
     4801 aacaggcaca atgcaaatta tatccggacc gttacttcct tttacataag gtcagctcct
     4861 tttgaacagc caggaaagta cccaccgcct gatcattgga gtcacctact tatgaataca
     4921 acaatgctgc aacataatgc tcagttcatg gatcttcctt gcaaattttc attttacagt
     4981 tatgtttact catgtattga tccaggggga ttttctcccg gattcattca ggattcaaac
     5041 cctgttcgtc tgtccctcgg gatgtttaaa ggatcgggtt cctttttttt ttccacttcc
     5101 gttgtttaca ttctttattc aattcttcat tttttaacgt acaatcaacc aatcatcagg
     5161 aagaagaaga agaaatcgtc gaaccgatcc caagagcgca tagaagattt atatcaagag
     5221 atcgagaggg aaccggtatg ccgacaattc tatgttgaaa gaatccgaag aattatgcac
     5281 atttgtgtta tattacacaa tatgatcacc gaggaaaatg gaagggcaat gtgtgacctt
     5341 gaagaaaatt ataggcccgc tcgtcgtcca agaagatcca ttgagaaaag ggttcaagcg
     5401 tacattcgcg ctaataaaga attgcgagat tcgaccattc atcagcttct acgacaaaag
     5461 ctcatcgaac acatttggaa tcttccggaa aattgtcgtc ttcgacatgt accacaagtg
     5521 ggaccttccg gtacaaccga aaatgatgac caagacgaag acgaggccga agacgaagac
     5581 gacgaagaaa acgaagatga ggacgacgaa tgtgatgaag atgatgagta g
//
LOCUS       XM_071831245            1515 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides replication factor A protein
            1-like (LOC139841008), mRNA.
ACCESSION   XM_071831245
VERSION     XM_071831245.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1515
                     /gene="LOC139841008"
                     /note="replication factor A protein 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841008"
     CDS             1..1515
                     /gene="LOC139841008"
                     /codon_start=1
                     /product="replication factor A protein 1-like"
                     /protein_id="XP_071687346.1"
                     /db_xref="GeneID:139841008"
                     /translation="MASGKAKVASEVNTNAYAFLNELEIGKQSQVKLMICRSWDTHTV
                     YGRYLSTDFIASDEKGNIIQLTAKSNVAHHFIARLKDGVVYLLHGFDVIANRTEYRIM
                     KDNSLMIELTGSTFLRRQSTSDTTGFTRHPFNCIELEDLEPTMGKFVVDVVGYAVNIG
                     APDPHKAGSNTLEFDLANERGKAIRTTLWGSLGPAFLERQPSAPASYYILLSSVTVKQ
                     DAITLSSTSATLLIDDLQIPALSEFKQRVSAIETPVIVQPSAPGWQLPPPTEGTLREL
                     LDMTGDAFKCKVEIVNIRMKNFWYYNTCSVCQARKGLERRSGHHWCESCQANVPEPIT
                     RFRVICDVRDETAKTVIVLFDDTTETLTKSTAKALLAEVDEETCNTVLPNALANLLGT
                     TQLVLLKTASYYDQGPYESFNCIKVYVDELVPTEQPSPTDMKRPALPGSTSSSVVAPA
                     FSTPKAPKRAIEVPTPAKDLERSNRRKFVVTTDSEDEDPADEDSQPEKESVCSE"
     misc_feature    <109..1155
                     /gene="LOC139841008"
                     /note="replication factor-a protein 1 (rpa1); Region:
                     rpa1; TIGR00617"
                     /db_xref="CDD:273177"
ORIGIN      
        1 atggcatctg gtaaagctaa ggttgcatct gaggttaaca caaacgcata cgccttcctc
       61 aatgagttgg aaataggaaa acaatcgcag gtcaagctga tgatctgcag aagttgggac
      121 acacatacgg tttacgggag atatttgagc acggatttta ttgcctcaga cgaaaagggc
      181 aacatcattc agttgactgc caaaagcaat gttgcacatc acttcattgc ccgactaaag
      241 gacggtgttg tttacttgct gcatggcttt gatgtcatcg ccaaccgaac tgaatatcgt
      301 atcatgaagg acaacagcct catgatcgag ctcaccggct ccactttcct caggagacag
      361 tcaacttctg acaccacggg ctttacgcgc catcccttca attgtattga actcgaggac
      421 ttggagccta caatgggcaa atttgttgtc gatgtagttg gctatgctgt gaacattggt
      481 gcacccgatc cgcataaagc aggatccaac actcttgaat ttgatctggc taacgagagg
      541 ggtaaagcga tccgaactac actttggggc agtttggggc ccgccttcct ggagaggcag
      601 ccctccgcac ctgcatccta ctacattctc ttgagctcgg ttaccgtcaa acaggatgcg
      661 ataactctct caagcacgtc cgccacactt cttatagacg acctccaaat accagcactc
      721 agtgaattca agcagagagt aagtgccatt gaaacccccg tgattgttca accttctgct
      781 ccagggtggc agttgccgcc gccaactgag gggacacttc gtgagcttct agatatgaca
      841 ggggacgcat tcaaatgtaa ggttgaaatt gtcaacatcc ggatgaaaaa cttttggtac
      901 tacaatactt gcagtgtttg tcaagcaaga aagggtctcg aaaggagatc tggacaccac
      961 tggtgtgaat cgtgccaggc taatgttcct gaaccaatca ccaggttccg cgttatatgt
     1021 gacgttagag atgagacggc gaaaacggtt atcgtgctct tcgacgacac taccgagacg
     1081 ttgaccaaga gcactgcaaa ggctctacta gctgaagtcg atgaggaaac atgtaacact
     1141 gtgcttccga atgcacttgc aaacctgcta gggaccacac aattggtcct gttgaagacg
     1201 gcatcgtact atgatcaggg cccgtacgag agtttcaatt gtattaaggt ttatgtggac
     1261 gagctggttc ccacagagca gccctcccca actgacatga aaaggcctgc actaccaggg
     1321 tcaacgtcat cctcggtagt tgctcccgca ttttcaacgc ccaaagcacc aaagagggcc
     1381 atagaggtcc ctacaccagc aaaggatttg gagcgttcca atcggcgcaa gtttgttgtc
     1441 acgaccgact cggaggatga agaccctgct gatgaagata gccagcctga gaaggagtct
     1501 gtgtgctctg aatag
//
LOCUS       XM_071831246             873 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139841011), mRNA.
ACCESSION   XM_071831246
VERSION     XM_071831246.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..873
                     /gene="LOC139841011"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139841011"
     CDS             1..873
                     /gene="LOC139841011"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071687347.1"
                     /db_xref="GeneID:139841011"
                     /translation="MSSSTSCDCLKNYCKCIIHMFSREYLRKPTKEDIRRLHAKYLEM
                     HGFSGMLGSLDCMHWAWKNCLVEWQGNYHMGDHEGPTIILEVVVSYDMWIWHAFFGPA
                     GSNNDINVLNESNLFKDLLDGRAPEVRYTINGHEFTKGYYLVDGIYPEWATLVKSFKC
                     PIKPKNVKFKRFQEASRKDVERAFGILQVLWAILKHPARPFSINKIRRIMYTCVILHN
                     MITEDNERSICDFEEDYLRDRENIPRRTWTERVELQERVDREMRDKRAHHILRNNLIE
                     HIWTLPNDYIVRNN"
     misc_feature    70..684
                     /gene="LOC139841011"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagctcat caacgtcttg tgattgttta aagaattatt gtaaatgtat tattcatatg
       61 ttttcgcgag aatatttaag gaaaccaact aaagaagata ttcgtcgatt gcatgccaaa
      121 tatttggaga tgcacggttt ttcgggtatg ttaggtagtc tcgattgcat gcactgggct
      181 tggaaaaatt gtctagttga gtggcaaggg aattaccaca tgggtgatca cgaaggacca
      241 acaataattc ttgaggtggt tgtgtcctac gatatgtgga tttggcacgc tttctttggt
      301 ccagcgggtt cgaacaatga tattaatgtt cttaatgaat caaatttgtt caaagattta
      361 ttggatggtc gagctccgga ggtccgttac actatcaacg ggcacgaatt tacaaaaggg
      421 tattacttgg tagatggcat atacccagaa tgggcaacac ttgtcaagtc gtttaaatgt
      481 ccaattaagc caaaaaatgt aaagtttaaa cgttttcaag aagcaagtag aaaagacgtg
      541 gaacgagctt tcggtattct tcaagttctt tgggcaatac taaaacaccc agcaagacct
      601 tttagtatca ataaaatacg tcgaatcatg tacacttgtg ttatacttca caacatgatc
      661 accgaagaca acgagcgtag catatgcgac ttcgaagagg attatctccg cgatcgagaa
      721 aacataccgc gtcgtacttg gacagagaga gttgagctcc aagaacgggt ggatcgagag
      781 atgcgagata aaagagcgca tcatatcctt cgcaacaatt tgatcgaaca catttggaca
      841 ctcccgaatg attatattgt tcgaaacaat tag
//
LOCUS       XM_071831247             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841012), mRNA.
ACCESSION   XM_071831247
VERSION     XM_071831247.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139841012"
                     /note="uncharacterized LOC139841012; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841012"
     CDS             1..780
                     /gene="LOC139841012"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687348.1"
                     /db_xref="GeneID:139841012"
                     /translation="MAHKLNDKVLRRGNKTSLGEASDEVTKKADKGFCSIMCNQCSKH
                     GHIAKDCKVVIPNALPPAAGGGNGNGNGKSKNGGTQKVCYECGKHGHFRDMCPNKKKT
                     AENTRGRAFNINVRDAEEDPKLVTGMFSVNDLSVYVLFDSGADLIFVSNKFSPKIKTP
                     LTPLDRIYAVEVANGKVANGKSVYRKCNIKLADRDFEVDLVHIELGSFDVVIGMDWLF
                     ENRAEIVCYEKAVRITRVCILLYVKGKEWLSGYQVAHGLME"
     misc_feature    <55..297
                     /gene="LOC139841012"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    316..705
                     /gene="LOC139841012"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(421..423,427..429,433..435,508..516,631..633)
                     /gene="LOC139841012"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    421..429
                     /gene="LOC139841012"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    421..423
                     /gene="LOC139841012"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(508..519,529..540)
                     /gene="LOC139841012"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggcacata agttgaatga taaggtgttg agaaggggaa acaaaacctc gttgggggaa
       61 gctagtgatg aggtgactaa gaaagctgat aaaggttttt gttcgatcat gtgtaatcaa
      121 tgttcaaagc atgggcatat agctaaggat tgtaaagtag ttatcccaaa tgctttacct
      181 cctgctgcgg gtggtggaaa tggtaatggt aatggtaagt cgaagaatgg tggtactcaa
      241 aaagtttgtt atgagtgtgg taagcatgga cacttccgtg atatgtgtcc taataagaag
      301 aaaacagcgg agaacacgcg tggtagagcg ttcaatatta atgtcagaga tgcagaggaa
      361 gacccgaaac ttgttactgg tatgttttcg gtcaatgatt tgtcggttta tgtacttttt
      421 gattccggtg ctgatttaat ttttgtgtcc aataaattta gtcctaaaat caaaactccg
      481 ttaactcctt tagacagaat ttatgctgta gaggtagcta atggtaaggt agctaatggt
      541 aagagtgtat accgtaagtg taatattaaa ctggctgata gagactttga agtagactta
      601 gtgcatattg agcttggaag ttttgatgtt gttattggta tggattggtt attcgaaaat
      661 cgtgctgaaa ttgtctgtta tgagaaagcc gttcgtatta ctcgtgtgtg tatattgttg
      721 tatgttaagg gtaaggaatg gctaagtggt taccaagtgg ctcacgggtt aatggaataa
//
LOCUS       XM_071831249            1053 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein CPR1-like
            (LOC139841013), mRNA.
ACCESSION   XM_071831249
VERSION     XM_071831249.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1053
                     /gene="LOC139841013"
                     /note="F-box protein CPR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139841013"
     CDS             1..1053
                     /gene="LOC139841013"
                     /codon_start=1
                     /product="F-box protein CPR1-like"
                     /protein_id="XP_071687350.1"
                     /db_xref="GeneID:139841013"
                     /translation="MDVVELILARSDVEDVLRCKSVCKSWYNLISSDYFVKTHLNRSY
                     NNNREHGYLRIRLHWKFNNVADNKFRDCMIVGSCNGLVCIFTNFKDELLVTNPSTREV
                     RILPKPCIKYRGRVICGFGYDSATDDYKVVVGFNQSKHHMRFQVLSLKSNKWKLVGDN
                     DNLTYLSSFNDYNCGFLYDGALHWFMDDTTKNKKKTIILSFDICLEKFKEIVLPNDHT
                     EYVYDERDRLGMFEERLCIYRCSEFYDFNAIHRQTWVMKNDNCWELVPHDYEGNKNGA
                     ATTAYVLDFIPDNTWCLFYDYQGNIHLSWRNWYNITCPVFVKSLVSPYPFGKPTYKKN
                     NKRSRRLKADSSSHKQ"
     misc_feature    4..105
                     /gene="LOC139841013"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(7..9,16..21,28..33,43..45,49..54,64..72,76..78)
                     /gene="LOC139841013"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    223..>774
                     /gene="LOC139841013"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtgg ttgagcttat acttgcaaga tcggatgtag aagatgttct ccgatgcaag
       61 agtgtttgta agtcatggta taatttaata tcatctgatt attttgttaa aactcatctt
      121 aatcgtagtt acaataacaa tcgtgaacat ggatatttaa gaatccgatt acattggaag
      181 ttcaataatg tcgctgataa taagtttcgt gattgtatga ttgttggttc atgtaatggc
      241 cttgtttgca tctttactaa ttttaaagat gaattattag taactaatcc ttccactcga
      301 gaggttcgaa tacttccaaa gccttgtatt aagtacaggg gaagagtaat ttgtggtttc
      361 ggttatgatt ctgctacgga tgattacaag gttgttgtcg gctttaatca atcgaagcat
      421 catatgcgct ttcaagtgtt atctttaaaa tcaaataaat ggaaattagt tggagacaac
      481 gataatttaa cttatctttc tagttttaat gattataatt gtggtttttt atacgatggg
      541 gcgcttcatt ggtttatgga tgatactaca aaaaacaaga agaagacaat tattctttcg
      601 tttgatatat gtctagagaa atttaaagaa atcgtgttac ctaatgatca cacggaatat
      661 gtatatgatg aacgggatag actagggatg tttgaagaac gtctatgcat atatcgttgc
      721 agtgaattct atgatttcaa tgctattcac cgccaaacgt gggtgatgaa aaatgataat
      781 tgttgggaac tggtcccaca tgattacgaa ggtaataaga atggtgctgc cactactgca
      841 tacgtactcg atttcattcc agacaacact tggtgtttat tttatgatta tcaaggaaac
      901 atacatttgt cttggcggaa ttggtataat attacttgtc ctgtatttgt caagtcactt
      961 gtttctccat atccgtttgg gaaaccaacg tataagaaga ataacaagag gagtcgtcgt
     1021 ctaaaagcgg attctagctc tcataaacag taa
//
LOCUS       XM_071831250            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein CPR1-like
            (LOC139841014), mRNA.
ACCESSION   XM_071831250
VERSION     XM_071831250.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139841014"
                     /note="F-box protein CPR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841014"
     CDS             1..1116
                     /gene="LOC139841014"
                     /codon_start=1
                     /product="F-box protein CPR1-like"
                     /protein_id="XP_071687351.1"
                     /db_xref="GeneID:139841014"
                     /translation="MDVVELILARSDVEDVLRFKSICKSWYSLISSDYFVKAHLKRSY
                     NNSREHGSLRILLHWIINNVTNNKLRNCMMVGSCNGLVCVSTKFKHEFLVTNPCTKEV
                     RKLPMFPYKIGINVWGFVYDFLTDDYKVVVGRNESKHHIRFQVLSLKSDKWKFVGDGD
                     YLNYNTDANTRNPYCGILYDGALHWYMDVTKKKKKVILSFDLSLEKFQEIPLPNEMEY
                     KSDDRNVLGLFEERLCILRYCDAVASYTQIWVMKNYNCWQLLPPDYEGTKYGDAITAH
                     VLNLTPDNTWRLCDDDKGTIDLSWYRWYHMITYPIFVKSLVSTLKKKKKNNKRKRRKI
                     HMRRKDKRVTRKLKKEASSKVSPATSSVTSSSSSSSS"
     misc_feature    4..105
                     /gene="LOC139841014"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(7..9,16..21,28..33,43..45,49..54,64..72,76..78)
                     /gene="LOC139841014"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    223..>762
                     /gene="LOC139841014"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggacgtgg ttgagcttat acttgcaaga tcggatgtag aagatgttct tcgattcaag
       61 agtatttgta agtcatggta tagtttaata tcatctgatt attttgttaa agctcatctt
      121 aaacgtagtt ataataacag tcgtgaacat ggatctttaa gaatcctatt acattggata
      181 atcaataatg tcactaataa taagttgcgt aattgtatga tggttggttc ctgtaatggc
      241 cttgtttgcg tctctactaa atttaaacat gaatttttag taactaatcc ttgcactaaa
      301 gaggttagaa aactgccaat gtttccttac aaaatcggga tcaatgtatg gggttttgtt
      361 tatgattttt taaccgatga ttataaggtt gttgtggggc gtaatgaatc caaacatcat
      421 atacgctttc aagtgttatc tttaaaatca gataaatgga aattcgttgg agacggtgat
      481 tatttaaatt ataatacaga tgctaatact cgtaatcctt attgtggtat tttatacgat
      541 ggggcgcttc attggtatat ggatgttaca aagaagaaga agaaagttat tctttctttt
      601 gatttatctc tagaaaaatt ccaagaaatc cccttaccta atgaaatgga atataaaagt
      661 gatgatcgaa acgtactagg gttgtttgaa gaacgtctat gcatacttcg ttactgtgat
      721 gccgttgcca gttacaccca aatatgggtg atgaaaaact ataattgttg gcaactgctc
      781 ccacctgatt acgaaggcac taagtatggt gatgccatta ctgcacacgt actgaatttg
      841 actccagaca acacttggcg tttatgtgat gatgataaag gaactataga tctgtcttgg
      901 tacagatggt atcatatgat cacttatcct atttttgtca aatcacttgt ttctacctta
      961 aagaaaaaga agaagaataa caagagaaag aggaggaaga tacacatgag gaggaaggat
     1021 aagagagtta ctcggaagct aaagaaggaa gcctcttcta aagtctcacc tgccacgagt
     1081 tctgtgactt catcatcatc atcatcatcc tcttga
//
LOCUS       XM_071831251            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841015), mRNA.
ACCESSION   XM_071831251
VERSION     XM_071831251.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139841015"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139841015"
     CDS             1..1089
                     /gene="LOC139841015"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687352.1"
                     /db_xref="GeneID:139841015"
                     /translation="MDVVELILARSDVEDVVRCKSVCKSWYNLISSNYFVKAHLKRSY
                     DNNRQHGYLRILLKWGIIKLRNCMIVDSSNGLVINKLRNCMIVGSFNGLVCISDNEDE
                     LLLVTNPSTREVRKLPKPYIKYRGKVCCSGFGYDSLTNDYKVVAGFNISEHHMRFQVL
                     SLKSNEWEFIGDNNNLTYNCSSDDLNCGFSYDGALHWFVYDTKKEKKVILSFDLSLEK
                     FKEIPLPNDTDYVYDEIDRLGMFEEHLCIFRSYDIFAINRQIWVMKNYSCWELVPLDY
                     EGNKYGAAINAYTLDRFPDNTWRLCNDYQGNVDMSCQSWFYISYPIFVRSLVSPYPCG
                     KPKKNTNNKSEEVVLKWIIALMNGKADS"
     misc_feature    4..105
                     /gene="LOC139841015"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(4..12,19..24,31..33,64..72,76..78,85..87)
                     /gene="LOC139841015"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(7..9,16..21,28..33,43..45,49..54,64..72,76..78)
                     /gene="LOC139841015"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    259..>798
                     /gene="LOC139841015"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtgg ttgagcttat acttgcaaga tcggatgtag aagatgttgt tcgatgcaag
       61 agtgtttgta agtcatggta taatttaata tcatctaatt attttgttaa agctcatctt
      121 aaacgtagct acgataacaa tcgtcaacat ggatatttaa gaatcctgtt aaaatggggg
      181 atcattaaat tgcgtaattg tatgatcgtc gattccagta atggccttgt tatcaataaa
      241 ttgcgtaatt gtatgatcgt cggttccttt aacggccttg tttgcatctc tgataatgaa
      301 gatgaattat tattagtaac taatccttcc actcgagagg ttagaaaact gccaaagcct
      361 tatatcaagt acaggggaaa agtatgttgt tcgggttttg gttatgattc tttaactaat
      421 gattacaagg ttgttgccgg ctttaatata tccgagcatc atatgcgctt tcaagtgtta
      481 tctttaaaat caaatgaatg ggaatttatt ggagacaaca ataatttaac ttataattgt
      541 agttctgatg atttgaattg tggtttttca tacgatgggg cgcttcattg gtttgtgtat
      601 gatacaaaga aggagaagaa agttattctt tcgtttgatt tatctcttga gaaattcaaa
      661 gaaatcccct tacctaatga cacggactat gtgtatgatg aaatagacag actagggatg
      721 tttgaagaac atctatgcat atttcgttcc tatgatatct ttgctattaa ccgccaaata
      781 tgggtgatga aaaactatag ttgttgggaa ctggtcccac ttgattacga aggtaataag
      841 tatggtgctg ccattaatgc atacacactc gatcgctttc cagacaacac ttggcgttta
      901 tgtaatgatt atcaaggaaa tgtagatatg tcttgccaga gttggtttta tattagttac
      961 cctatatttg tcaggtcact tgtatctcca tatccatgcg ggaaaccaaa gaaaaatacg
     1021 aataacaaga gcgaggaagt cgtcttaaag tggattatag ctctcatgaa cggtaaagcg
     1081 gattcttaa
//
LOCUS       XM_071831252             966 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841016), mRNA.
ACCESSION   XM_071831252
VERSION     XM_071831252.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139841016"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139841016"
     CDS             1..966
                     /gene="LOC139841016"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687353.1"
                     /db_xref="GeneID:139841016"
                     /translation="MEVVLARLDVEDVVRCKSVCKSWYNLISSNDFVKAHLKHSYISN
                     REHGFLRIRLHWIPNNNAANLRNCLMVGSCNGLVCISPNPGEFLVTNPSTREVKNLPN
                     LGYNDNRRKVCCWGFGYDYTNDDYKVVVGFSESKDHVGFQVLSLISDKWIFDGDCHYL
                     TYNTNANPDASANDLLCGILYDGALHWFMDDTKKKKSVILSFDLSLEKFKEIPQPDDD
                     VYLCDNRTLLVTFEEHLCIVRSYYIHDRYYRYCQTIWVMRNYNCWQMLPHDYNGDMYA
                     ITAYTLDCFPDNTWRLCDYQKLNICYSITSPIFVKSLVSPYPCVD"
     misc_feature    1..96
                     /gene="LOC139841016"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(7..12,19..24,34..36,40..45,55..63,67..69)
                     /gene="LOC139841016"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    211..>780
                     /gene="LOC139841016"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggaggtgg tacttgcaag attggatgta gaagatgttg ttcgatgcaa gagtgtttgc
       61 aagtcctggt ataatttaat atcttctaat gattttgtta aagctcatct taaacacagt
      121 tacattagca accgtgaaca tggattttta agaatccgat tacattggat tcccaataat
      181 aatgctgcaa acttgcgcaa ttgcttgatg gttggttcgt gtaatggtct tgtttgcatc
      241 tctcctaatc caggtgaatt tttagtaact aatccttcca ctcgagaggt taaaaatctg
      301 ccgaatcttg gttacaatga caacaggaga aaagtatgtt gttggggttt tggttatgat
      361 tatactaatg atgattacaa ggttgttgtc ggctttagtg aatccaagga tcatgtgggc
      421 tttcaagtgt tatctttaat atcagataaa tggatatttg atggagactg ccattattta
      481 acttataata ctaatgctaa tcctgatgct agtgctaatg atcttctttg tggtatttta
      541 tacgatgggg cgcttcattg gtttatggat gatacaaaga agaagaagag cgtaattctt
      601 tcgtttgatt tatctctaga gaaattcaaa gaaatccccc aacctgatga tgatgtatat
      661 ttatgtgata atcgaacctt actagtgacg tttgaagaac atctatgcat agttcgttcc
      721 tattatatcc atgataggta ttatagatac tgccaaacga tatgggtgat gagaaactat
      781 aattgttggc aaatgctccc tcatgattac aatggtgaca tgtatgctat tactgcatac
      841 acactcgatt gctttccaga caacacttgg cgtttatgtg attatcagaa actaaacata
      901 tgttactcca ttacttcccc tatatttgtc aagtcacttg tatctcccta tccatgtgtg
      961 gattga
//
LOCUS       XM_071831253            1023 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841017), mRNA.
ACCESSION   XM_071831253
VERSION     XM_071831253.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1023
                     /gene="LOC139841017"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139841017"
     CDS             1..1023
                     /gene="LOC139841017"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687354.1"
                     /db_xref="GeneID:139841017"
                     /translation="MHFLSNNIKHNFRFIIIDVAENILARLDVEDVLRCKSVCKLWYN
                     LISSNYFVKAHLKHSYNNNREHGYLRIRLTWMINYNNVTNLHNYMIVGSCHGLVCISS
                     NNGELLVTNPSTREVRKLPMLPYKYRHNVCWGFGYDSLTDDYKIVVGLNESEHHMRFQ
                     VLSLKSNKWKFVGEGDYLTYNTNTNDSICGFLYDGALHWFMNDTKKKRKMIVSFDISS
                     EKFKEIPLLNDTKYVYDDRDRVGMFEERLCIYCSYYIDDSYCRKIWVMKNYNWWELVP
                     RDYEGNKYGAATTAYILDNILDKTWLLLHHHEGNEYLLSQSWYHITSPIFVKSLVSPN
                     NKKNIK"
     misc_feature    52..153
                     /gene="LOC139841017"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(55..57,64..69,76..81,91..93,97..102,112..120,
                     124..126)
                     /gene="LOC139841017"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    271..>807
                     /gene="LOC139841017"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgcattttc tatctaataa tataaagcac aattttcgtt tcattataat agatgtggct
       61 gagaatatac ttgcaagatt ggatgtagaa gatgttcttc gatgcaagag tgtttgtaag
      121 ttatggtata atttaatatc atctaattat tttgttaaag ctcatcttaa acatagctac
      181 aataacaatc gtgaacatgg atatttaaga atccgattaa cgtggatgat caattacaat
      241 aatgtcacta atttgcataa ttatatgata gttggttcat gtcatgggct tgtttgtatc
      301 tcttcaaata atggtgagtt attagtaact aatccttcca ctcgagaggt tagaaagcta
      361 ccaatgcttc cttacaagta caggcacaat gtatgttggg gttttggtta tgactctctc
      421 accgatgatt acaagattgt tgtcggactt aatgaatccg agcatcatat gcgctttcaa
      481 gtgttatctt taaaatcaaa taaatggaaa ttcgttggag aaggcgatta tttaacttat
      541 aatactaata ctaatgattc tatttgtggt tttttatacg atggggcgct tcattggttc
      601 atgaatgata caaagaagaa gaggaaaatg attgtttcgt ttgatatatc ttcagagaaa
      661 ttcaaagaaa tccccttact taatgacacg aaatatgtat atgatgatcg agacagagta
      721 gggatgtttg aagaacgtct atgcatatat tgttcctatt atatcgatga tagttactgc
      781 cgaaaaatat gggtgatgaa aaactataat tggtgggaac tggtcccacg tgattacgaa
      841 ggtaataagt atggtgctgc aactactgca tacatactcg ataacattct ggacaaaact
      901 tggcttttac ttcatcatca tgaaggaaac gaatatctgc tttcgcagag ttggtatcat
      961 attacttccc ctatatttgt gaagtcactt gtatctccaa ataataagaa gaatataaaa
     1021 tag
//
LOCUS       XM_071831254             786 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841019), mRNA.
ACCESSION   XM_071831254
VERSION     XM_071831254.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..786
                     /gene="LOC139841019"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139841019"
     CDS             1..786
                     /gene="LOC139841019"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687355.1"
                     /db_xref="GeneID:139841019"
                     /translation="MVGSCNGLVCISNFPDELLVTNPSTREVRKLPMIPHKIAINICW
                     GFGYDSTSDDYKVVAGFSESKHHMRFEVLSLKSNKWKFVGEGDYLTYNTNTNDSICGF
                     LYDGALHWFMNDTKKKRKMIVSFDISSENFKEIPLPNDKEYVYDKIDRLGMFEECLCI
                     FRCYYDHDSYSYCQRIWVMKNYNCWQLLPRDKYGDDTTAYILEFTPDNTWRLFYDHKG
                     NKHMFSQSWNNITSPIFVKSLVSPNKKKNNNRPELSKSGFYLS"
     misc_feature    4..>546
                     /gene="LOC139841019"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggttggtt catgtaatgg ccttgtttgc atctctaatt ttccagatga attattagta
       61 actaatcctt ccactcgaga ggttagaaaa ctgccaatga ttcctcacaa aatcgcgatc
      121 aatatatgtt ggggttttgg ttatgattct accagcgatg attacaaggt tgttgctggc
      181 tttagtgaat ccaagcatca tatgcgcttt gaagtgttat ctttaaaatc aaataaatgg
      241 aaattcgttg gagaaggcga ttatttaact tataatacta atactaatga ttctatttgt
      301 ggttttttat acgatggggc gcttcattgg ttcatgaatg atacaaagaa gaagaggaaa
      361 atgattgttt cgtttgatat atcttcagag aacttcaaag aaatcccctt acctaatgac
      421 aaggaatatg tgtatgataa aatagacaga ctagggatgt ttgaagaatg tctatgcata
      481 tttcgttgct attatgacca tgatagttat agttactgcc aaagaatatg ggtgatgaaa
      541 aactataatt gttggcaact cctcccacgt gataagtatg gtgatgacac tactgcatac
      601 atactcgaat tcactccaga caacacttgg cgtttatttt atgatcataa aggaaacaaa
      661 catatgtttt cacagagttg gaataatatt acttccccta tatttgtgaa gtcactggta
      721 tctccaaata aaaagaagaa taacaatagg ccggagttgt ctaaaagtgg attctacctc
      781 tcatga
//
LOCUS       XM_071831255             687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841020), mRNA.
ACCESSION   XM_071831255
VERSION     XM_071831255.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..687
                     /gene="LOC139841020"
                     /note="uncharacterized LOC139841020; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841020"
     CDS             1..687
                     /gene="LOC139841020"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687356.1"
                     /db_xref="GeneID:139841020"
                     /translation="MKHKDNVWKISKWIEGHICYGSVQSNNNHCLTSSIIATDIISYI
                     SQDIARIAIERLCGTWQSNLAEFPTYVDELVHTNPDTIVRWVFGPQVEYGVLTFKYVL
                     WAFGPAIMAYQQCIPILCIDETHLKGNYIGKMLTGVAKNANRQVLPVAFAVVDTESNE
                     SWAWFLEMVQTHVNVSNRDLCVISDRHVRILNEMANQQYGWHHRYCLCHIRSNLMTKF
                     NRNTELKKLC"
     misc_feature    352..639
                     /gene="LOC139841020"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgaaacata aggataatgt gtggaaaatt tcaaaatgga ttgagggaca catttgttat
       61 ggaagcgtgc aaagtaacaa caatcattgc ttaacctcca gtataattgc tactgatatt
      121 atatcttata ttagtcaaga tattgcgcgt attgcaatag aacgtttgtg tggaacttgg
      181 caaagcaact tggcagaatt tcccacatat gtcgatgaat tggttcacac caatccggat
      241 acaattgttc gatgggtgtt tggccctcaa gtagaatatg gtgtcctcac attcaaatat
      301 gtattatggg catttggccc tgctattatg gcgtaccaac aatgtattcc tatactttgt
      361 attgatgaga ctcatttgaa gggtaactac attggcaaga tgcttacagg ggtagccaaa
      421 aatgctaaca ggcaagttct gcccgttgca tttgcagtag ttgatactga atcgaacgaa
      481 agttgggctt ggtttttgga aatggtccaa acacatgtta atgtcagtaa cagagatttg
      541 tgtgttatat ctgatcgtca tgtacgtata cttaatgaga tggctaacca gcaatatggc
      601 tggcatcatc gttattgttt gtgccacatt cgtagtaact tgatgacaaa gtttaacaga
      661 aacaccgagt tgaagaagtt gtgttag
//
LOCUS       XM_071831257            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841021), mRNA.
ACCESSION   XM_071831257
VERSION     XM_071831257.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139841021"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139841021"
     CDS             1..1038
                     /gene="LOC139841021"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687358.1"
                     /db_xref="GeneID:139841021"
                     /translation="MDAVVEEILKRLHVDDVVRCKSVCKSWYNLISSNDFVKAHLKRN
                     YSSNREHGYLRIRLHPMINKYIELRNCMMVGSCNGLVCISTNTNNVPELLVTNPSTRE
                     VRQLPMAPYKYRGRLCWGFGYDSSTDDYKVVVGFEESMHHMRFQVLSLKSNQWKSLKP
                     NKWKFVEDCEYLTYNTTRNTYDRGFLYNGALHWFMDDTKKKKKVILSFDLTLKKFKEI
                     PLPNDMVDMYGHRNRLGLFEEHLCICEFNCYDYYAKHRQTWVMKSYNGWQLLPRDYEG
                     NKYGSVTRAYVLDFIPDNTWHLVFDHKRNKHMSSKSWLNVGAPIFVKSLVSPLMKKKN
                     NKSEESSKSEF"
     misc_feature    4..108
                     /gene="LOC139841021"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(7..15,22..27,34..36,67..75,79..81,88..90)
                     /gene="LOC139841021"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(10..12,19..24,31..36,46..48,52..57,67..75,79..81)
                     /gene="LOC139841021"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    220..>786
                     /gene="LOC139841021"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgctg tggttgagga gatacttaaa agattgcatg ttgatgatgt tgttcgatgc
       61 aagagtgttt gtaagtcatg gtataatcta atatcatcta atgattttgt taaagctcat
      121 cttaagcgta attacagtag caatcgtgaa catggatatt taagaatccg attacatcca
      181 atgatcaata agtacattga attgcgtaat tgtatgatgg ttggttcgtg taatgggctt
      241 gtttgcatct ctactaatac taataatgta cctgaattat tagtaaccaa tccttccact
      301 cgggaggtta gacaattgcc aatggctcct tacaagtata ggggaagatt atgttggggt
      361 tttggttatg attcttctac cgatgattac aaggttgttg tcggctttga ggaatccatg
      421 catcatatgc gctttcaagt gttatcttta aaatcaaatc aatggaaatc tttaaaacca
      481 aataaatgga aattcgttga agactgcgag tatttaactt acaatactac tcgtaatact
      541 tatgatcgtg gttttttgta caatggggcg cttcattggt ttatggatga tacaaagaag
      601 aagaagaaag ttattctttc ttttgattta actctaaaaa aattcaaaga aatcccctta
      661 cctaatgaca tggttgatat gtatggtcat cgaaacagac tagggttgtt tgaagaacat
      721 ctatgcatat gcgaattcaa ttgctatgat tattatgcta aacaccgcca aacatgggtg
      781 atgaaaagct ataatggttg gcaactgctc ccacgtgatt acgaaggtaa taagtatggt
      841 tctgtcactc gtgcatacgt actcgatttc ataccagata acacttggca tttagttttt
      901 gatcataaac gaaacaaaca tatgtcttcg aagagttggt taaatgttgg tgcccctata
      961 tttgtcaagt cactagtttc tcccttgatg aaaaagaaga ataacaagag cgaggagtcg
     1021 tctaaaagtg aattctag
//
LOCUS       XM_071831258             399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nascent
            polypeptide-associated complex subunit beta-like (LOC139841022),
            mRNA.
ACCESSION   XM_071831258
VERSION     XM_071831258.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..399
                     /gene="LOC139841022"
                     /note="nascent polypeptide-associated complex subunit
                     beta-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 35 Proteins"
                     /db_xref="GeneID:139841022"
     CDS             1..399
                     /gene="LOC139841022"
                     /codon_start=1
                     /product="nascent polypeptide-associated complex subunit
                     beta-like"
                     /protein_id="XP_071687359.1"
                     /db_xref="GeneID:139841022"
                     /translation="MFNKWKKVVHKTTTKDDKKLRSTLKRIGVNAIPTIEEVNIFKDE
                     FVIQFLNRKVQASIAANTWVVSDAPQTKKLQDILRSILNQLGPDNLDNLRKLAEQFQK
                     QTPASATVQDDDDEVPELVAGETFEEGQKS"
     misc_feature    16..300
                     /gene="LOC139841022"
                     /note="basal transcription factor BTF3; Region: NAC_BTF3;
                     cd22055"
                     /db_xref="CDD:409234"
     misc_feature    order(97..126,139..141,145..147,181..201,205..207,
                     247..255)
                     /gene="LOC139841022"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:409234"
ORIGIN      
        1 atgttcaata aatggaagaa ggtcgtgcat aaaacaacaa ccaaggacga taagaagctg
       61 cgaagcactt taaagagaat aggtgtaaat gcaattccaa caattgagga agttaacatt
      121 ttcaaagatg aatttgtcat ccagttttta aaccgtaaag ttcaagcttc tattgctgcc
      181 aacacttggg ttgttagtga tgctccccaa acaaagaaat tgcaagatat tctccgcagc
      241 attctgaacc aactgggacc agataattta gataacttga gaaagttagc agaacagttt
      301 cagaaacaga caccggcgtc tgcaactgta caagatgatg atgatgaagt cccagaactc
      361 gttgcaggtg agacttttga agaaggtcaa aaatcatag
//
LOCUS       XM_071831259             663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841023), mRNA.
ACCESSION   XM_071831259
VERSION     XM_071831259.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..663
                     /gene="LOC139841023"
                     /note="uncharacterized LOC139841023; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841023"
     CDS             1..663
                     /gene="LOC139841023"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687360.1"
                     /db_xref="GeneID:139841023"
                     /translation="MRKGLEVAITQVYPNIEHRECIRHLYSNFKRHFRGDFFTSNLWA
                     AARTYRPSEHDILLKEIFDEREAAITYLNQNHKRIWSRSKFGTISKCDYITNNISKVF
                     NSWIGDLRCQPVLQLLDAIREKFMNLGEYEVLRSSDNRAEVKFKGRQWEVVLNERTCT
                     CRVWQVKGLPCKHAAAFIGSIRDNNWDKHVDQYFTIEKYKEAYALDISPMPGKDEWDR
                     EG"
     misc_feature    448..528
                     /gene="LOC139841023"
                     /note="SWIM zinc finger; Region: SWIM; pfam04434"
                     /db_xref="CDD:309540"
ORIGIN      
        1 atgcgaaaag gattagaagt agcaatcaca caagtttatc ctaacattga gcatagagaa
       61 tgtatcaggc acttgtatag taatttcaag agacactttc gtggtgactt ctttacctct
      121 aacttgtggg cagctgcacg aacctatcgt cctagtgagc atgacatact actaaaggaa
      181 atctttgatg aacgagaagc ggcaattaca tatctaaatc agaaccataa gaggatatgg
      241 agtcgaagca agtttggcac aatatctaag tgtgattaca ttactaataa tatttctaaa
      301 gtttttaatt cttggatagg tgacttgcgt tgtcaaccag tccttcaact actagatgcc
      361 attagagaaa agtttatgaa cttgggtgaa tatgaggttc ttagaagtag cgataaccga
      421 gctgaagtga aattcaaggg aagacaatgg gaggttgtac taaatgagcg aacatgcact
      481 tgtcgagttt ggcaggtgaa gggtcttcca tgtaaacatg cagcagcttt cattggtagc
      541 ataagggata ataattggga taaacatgtt gatcaatatt ttacaattga gaagtataaa
      601 gaggcttatg ctttagatat ttctccgatg ccgggaaaag atgaatggga tagagaagga
      661 tga
//
LOCUS       XM_071831260            1026 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841024), mRNA.
ACCESSION   XM_071831260
VERSION     XM_071831260.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1026
                     /gene="LOC139841024"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139841024"
     CDS             1..1026
                     /gene="LOC139841024"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687361.1"
                     /db_xref="GeneID:139841024"
                     /translation="MDVMIEEILARLDVKDALRCKSVCKSWYNLISSDYFVNAHLKRS
                     YNYNREHGYIRIRLHCKNNNVTKFRDCMMVGSCDGLVCISPGKGELLLTNPSTREVSR
                     KLPKLPMLPYNDRRKVCWGFGYDSLKDDYKVVAGFNISEHHMCFQVLSLKSNKWKFIG
                     DGDYLTYNTNTYYSNSRGVSYHGALHWFMNDTEKKKTIILSFDLSLEKFKEIQLRKDT
                     EYVYDEIDRRGIFEERLCIFRNYYFLESYYYPIWVMKNCNCWQLRDYEGNKHDVAPRA
                     YKLHCSLDNNWRLCDDDKGNVDLSWLSLYNITYPIFVNSLASPYPCGKPKKNTNNKSE
                     ESPKSGF"
     misc_feature    4..108
                     /gene="LOC139841024"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(10..12,19..24,31..36,46..48,52..57,67..75,79..81)
                     /gene="LOC139841024"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    220..>768
                     /gene="LOC139841024"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtta tgatcgagga aatacttgca agattggatg taaaagatgc tctccgatgc
       61 aagagtgttt gtaagtcatg gtataattta atatcatctg attattttgt taatgctcat
      121 cttaaacgta gctacaatta caatcgtgaa catggatata taagaatccg attacattgc
      181 aagaacaata acgtcactaa attccgtgat tgtatgatgg ttggatcatg tgatggtctt
      241 gtttgcatct ctcccggtaa aggtgagtta ttactaacta atccttccac tagagaggtt
      301 agcagaaaac tgccaaaact gccaatgctc ccttacaatg accggagaaa agtatgttgg
      361 ggttttggtt atgattcttt aaaggatgat tacaaggttg ttgccggctt taatatatcc
      421 gagcatcata tgtgctttca agtgttatct ttaaaatcaa ataaatggaa attcattggg
      481 gatggcgatt atttaactta taatactaat acttattatt ctaatagtcg tggtgtttca
      541 taccatgggg cgcttcattg gtttatgaat gatacagaga agaagaagac aattattctt
      601 tcatttgatt tatctctaga gaaattcaaa gaaattcagt tacgtaaaga cacagaatat
      661 gtgtatgatg aaatagatag acgagggata tttgaagaac gtctatgcat atttcgtaac
      721 tattatttcc ttgaaagtta ctattatcca atatgggtga tgaaaaactg taattgttgg
      781 caactgcgtg attacgaagg taataagcat gatgttgccc ctcgtgcata caaactccat
      841 tgctctctag acaacaattg gcgtttatgt gatgatgata aaggaaatgt agatctgtct
      901 tggctgagtt tgtataatat tacttaccct atttttgtca actcacttgc ttctccatat
      961 ccctgtggga aaccaaagaa aaatacgaat aacaagagcg aggagtcacc caaaagtgga
     1021 ttctag
//
LOCUS       XM_071831261             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841025), mRNA.
ACCESSION   XM_071831261
VERSION     XM_071831261.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139841025"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 46 Proteins"
                     /db_xref="GeneID:139841025"
     CDS             1..861
                     /gene="LOC139841025"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687362.1"
                     /db_xref="GeneID:139841025"
                     /translation="MDDDGVVEKILARLDVEDVLRCKSVCKSWYNLISSDYFVKANLK
                     RSYNNNREHGYIRIRLRLLRWTINIITKLRDYCMVTGSCNSLVCISSFGDELLVTNLC
                     TREVRKLPMPPYKCRGRVCWGFGYDSSTDDYKLVVCFEESNHHIRFQVVSLKSNKWKS
                     LKPNKWKFVEHRDYLTYNTNSNTYACGFIYNGALHWFLDDTKKKRKMIVSFDLCLEKF
                     KEIPLPNDTEYVRNNQDRLGMLEERLCICIFRAHHQTWVMKNCNGWQLLPPDYQGNKY
                     GAVTPAYKLD"
     misc_feature    10..114
                     /gene="LOC139841025"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(16..18,25..30,37..42,52..54,58..63,73..81,85..87)
                     /gene="LOC139841025"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    241..>780
                     /gene="LOC139841025"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgatg atggtgtggt tgaaaagata cttgcaagat tggatgtaga agatgttctt
       61 cggtgcaaga gtgtttgtaa gtcatggtat aatttaatat catctgatta ttttgtaaaa
      121 gctaatctta aacggagcta caataacaat cgtgaacatg gatatataag aatcagatta
      181 cgtcttttac gttggacgat taatattatc actaaattgc gtgattattg tatggtgacg
      241 ggttcctgta atagccttgt ttgcatctct tcttttggag atgaattatt agtaactaat
      301 ctttgtacta gagaggttag aaaattgcca atgcctcctt acaagtgcag gggaagagta
      361 tgttggggtt ttggttatga ttcttctact gatgattaca agcttgttgt ctgctttgag
      421 gaatccaatc atcatatacg ctttcaagtg gtatctttaa aatcaaataa atggaaatct
      481 ttgaaaccaa ataaatggaa attcgttgaa caccgggatt atttaactta caatactaat
      541 agtaatactt atgcttgtgg ttttatatac aatggggctc ttcattggtt cctggatgat
      601 acaaagaaga agagaaaaat gattgtttcg tttgatttat gtctagagaa attcaaagaa
      661 atacccttac ctaatgacac ggaatatgta aggaataatc aagacagact agggatgttg
      721 gaagaacgtc tttgcatatg catattccgt gctcaccacc aaacatgggt gatgaaaaac
      781 tgtaatggtt ggcaactgct cccacctgat taccaaggta ataagtatgg tgctgtcacg
      841 cctgcataca aactcgatta g
//
LOCUS       XM_071831262             978 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841026), mRNA.
ACCESSION   XM_071831262
VERSION     XM_071831262.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..978
                     /gene="LOC139841026"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139841026"
     CDS             1..978
                     /gene="LOC139841026"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687363.1"
                     /db_xref="GeneID:139841026"
                     /translation="MDVVVEIVARLDVEDVIRCKSVCKSWYDLISSDYFVKTHLKRSY
                     NNNRKHGYIRIRLHWMINNVTKLRGCTMVGSCDGLVCISPDKGEFLITNPSTREVRKL
                     PMIPYTVRERMCWGFGYDPSTDDYKVVVGFNESEHHMRFHVLYLKSNKWKFIGDCDYF
                     TYSNCGVLYDGALHWFMDDTEKKTIIISFDLSLEKFKQIPLPKDTEYVYDEIDGLGMF
                     EERLCIFRSYYFLDRYYTTIWVMKNYNCWQLLPRDYEGNKYAAATSAYKLNCFPDNTW
                     RLCDDNKGNVDLSWQSWYNFTYPIFVNSLVSPLKKKKNNWSEESSKSGF"
     misc_feature    4..105
                     /gene="LOC139841026"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(7..9,16..21,28..33,43..45,49..54,64..72,76..78)
                     /gene="LOC139841026"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    217..>732
                     /gene="LOC139841026"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtgg ttgtggagat agttgcaaga ttggatgtag aagatgttat tcgatgcaag
       61 agtgtttgta aatcatggta tgatttaata tcgtctgatt attttgttaa aactcatctt
      121 aaacgtagct acaataacaa tcgtaaacat ggatatataa gaatccgatt acattggatg
      181 atcaataatg tcactaaatt gcgtggttgt actatggtcg gatcctgtga tggtcttgtt
      241 tgcatctctc ctgataaagg tgagttttta ataactaatc cttccactcg agaggttaga
      301 aaactgccaa tgattcctta tacggtcagg gaaagaatgt gttggggttt tggttatgat
      361 ccttctactg atgattacaa ggttgttgtt ggctttaatg agtccgagca tcatatgcgc
      421 tttcatgtgt tatatttgaa atcaaataaa tggaaattca ttggggattg cgattatttt
      481 acttattcta attgtggcgt tttatatgat ggggcgcttc attggtttat ggatgataca
      541 gagaagaaga caattattat ttcgttcgat ttatctctag agaaattcaa acaaattccc
      601 ttacctaaag acacggaata tgtgtatgat gagatagacg gactagggat gtttgaagaa
      661 cgtctatgca tatttcgctc ctattatttc cttgatagat actacacaac aatatgggtg
      721 atgaaaaact ataattgttg gcaactgctc ccacgtgatt acgaaggtaa taagtatgct
      781 gctgccacta gtgcgtacaa actcaattgc tttccggaca acacttggcg tttatgtgat
      841 gataataaag gaaatgtaga tttgtcttgg caaagttggt ataattttac ttaccctata
      901 tttgtcaact cacttgtttc tcccttaaag aaaaagaaga ataactggag cgaggagtcg
      961 tccaaaagtg ggttctag
//
LOCUS       XM_071831263            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein CPR1-like
            (LOC139841027), mRNA.
ACCESSION   XM_071831263
VERSION     XM_071831263.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139841027"
                     /note="F-box protein CPR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139841027"
     CDS             1..1038
                     /gene="LOC139841027"
                     /codon_start=1
                     /product="F-box protein CPR1-like"
                     /protein_id="XP_071687364.1"
                     /db_xref="GeneID:139841027"
                     /translation="MDDDGVVEKILARLDVEDVLRCKSVCKSWYNLISSDYFVKAHLK
                     RTYNNNREHGYIRIRLRLLRWTINNITKLHDYCLMAGSCNGLVCISSFGDELAVTNPC
                     TREVRKLPMPPYKCRGRVCWGFGYDSSTDDYKLVVGFEESKYHMRFQVLSLKSNQWKS
                     LKPNKWKFAEDLDYLTYNTNTNTNTYACGLLYDRALHWFMDDTKKKRKMIVSFDLCLE
                     KFKEIPLPNDTEYVWNNQDRLGMFEERLCICIFRAHHQTWVMKNCNGWQLLPPDYQGN
                     KYGAVTPAYKLDLTRDNTWGLCDDDKGNIDLSWKCNWLNVTAPIFVKSLVSPLMKKKN
                     NKNEETSTSGF"
     misc_feature    10..114
                     /gene="LOC139841027"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(16..18,25..30,37..42,52..54,58..63,73..81,85..87)
                     /gene="LOC139841027"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    241..>786
                     /gene="LOC139841027"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgatg atggtgtggt tgaaaagata cttgcaagat tggatgtaga agatgttctt
       61 cggtgcaaga gtgtttgtaa gtcatggtat aatttaatat catctgatta ttttgttaaa
      121 gctcatctta aacgtaccta caataacaat cgtgaacatg gatatataag aatcagatta
      181 cgtcttttac gttggacgat taataatatc actaaattgc atgattattg tttgatggcc
      241 ggttcctgta atggccttgt ttgcatctct tcttttggag atgaattagc tgtaactaat
      301 ccttgtacta gagaggttag aaaattgcca atgcctcctt acaagtgcag gggaagagta
      361 tgttggggtt ttggttatga ttcttctacc gatgattaca agcttgttgt cggctttgag
      421 gaatccaagt atcatatgcg ctttcaagtg ttatctttaa aatcaaatca atggaaatct
      481 ttaaaaccaa ataaatggaa attcgctgaa gacctggatt atttaactta caatactaat
      541 actaatacta atacttatgc ttgtggtctt ttatacgata gggcgcttca ttggttcatg
      601 gatgatacaa agaagaagag aaaaatgatt gtttcgtttg atttatgtct tgagaaattt
      661 aaagaaatcc ccttacctaa tgacaccgaa tatgtatgga ataatcaaga cagactaggg
      721 atgtttgaag aacgtctatg catatgcata ttccgtgctc accaccaaac atgggtgatg
      781 aaaaactgta atggttggca actgctccca cctgattacc aaggtaataa gtatggtgct
      841 gtcacacctg catacaaact cgatttgact cgagacaaca cttggggttt atgtgatgat
      901 gataaaggta acatagatct atcttggaag tgtaattggt taaacgttac tgcccctata
      961 tttgtcaagt cattagtttc acccttgatg aaaaagaaga ataacaagaa cgaggagaca
     1021 tctacaagtg gattctag
//
LOCUS       XM_071831264             483 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At3g16210 (LOC139841028), mRNA.
ACCESSION   XM_071831264
VERSION     XM_071831264.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..483
                     /gene="LOC139841028"
                     /note="putative F-box protein At3g16210; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139841028"
     CDS             1..483
                     /gene="LOC139841028"
                     /codon_start=1
                     /product="putative F-box protein At3g16210"
                     /protein_id="XP_071687365.1"
                     /db_xref="GeneID:139841028"
                     /translation="MDVVVEIVARLDVEDVIRCKSVCKSWYNLISSDYFVKTHLKRSY
                     NNNRKHGYIRIRLHWMINNVTKLRGCTMVGSCDGLVCISPDKGEFLITNPSTREVRKL
                     PMIPYRVRERMCWGFGYDPFTDDYKVVVGFNESEHHMCFHVLSLKSNKNGNSLGIAII
                     "
     misc_feature    4..105
                     /gene="LOC139841028"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(7..9,16..21,28..33,43..45,49..54,64..72,76..78)
                     /gene="LOC139841028"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    217..>450
                     /gene="LOC139841028"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtgg ttgtggagat agttgcaaga ttggatgtag aagatgttat tcgatgcaag
       61 agtgtttgta agtcatggta taatttaata tcgtctgatt attttgttaa aactcatctt
      121 aaacgtagct acaataacaa tcgtaaacat ggatatataa gaatccgatt acattggatg
      181 atcaataatg tcactaaatt gcgtggttgt actatggttg gatcctgtga tggtcttgtt
      241 tgcatctctc ctgataaagg tgagttttta ataactaatc cttccactcg agaggttaga
      301 aaactgccaa tgattcctta tagggtcagg gaaagaatgt gttggggttt tggttatgat
      361 ccttttactg atgattacaa ggttgttgtt ggctttaatg agtctgagca tcatatgtgc
      421 tttcatgtgt tatctttgaa atcaaataaa aatggaaatt cattggggat tgcgattatt
      481 taa
//
LOCUS       XM_071831265             483 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At3g16210 (LOC139841029), mRNA.
ACCESSION   XM_071831265
VERSION     XM_071831265.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..483
                     /gene="LOC139841029"
                     /note="putative F-box protein At3g16210; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139841029"
     CDS             1..483
                     /gene="LOC139841029"
                     /codon_start=1
                     /product="putative F-box protein At3g16210"
                     /protein_id="XP_071687366.1"
                     /db_xref="GeneID:139841029"
                     /translation="MDVVVEIVARLDVEDVIRCKSVCKSWYNLISSDYFVKTHLKRSY
                     NNNRKHGYIRIRLHWMINNVTKLRGCTMVGSCDGLVCISPDKGEFLITNPSTREVRKL
                     PMIPYRVRERMCWGFGYDPFTDDYKVVVGFNESEHHMCFHVLSLKSNKNGNSLGIAII
                     "
     misc_feature    4..105
                     /gene="LOC139841029"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(7..9,16..21,28..33,43..45,49..54,64..72,76..78)
                     /gene="LOC139841029"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    217..>450
                     /gene="LOC139841029"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtgg ttgtggagat agttgcaaga ttggatgtag aagatgttat tcgatgcaag
       61 agtgtttgta agtcatggta taatttaata tcgtctgatt attttgttaa aactcatctt
      121 aaacgtagct acaataacaa tcgtaaacat ggatatataa gaatccgatt acattggatg
      181 atcaataatg tcactaaatt gcgtggttgt actatggttg gatcctgtga tggtcttgtt
      241 tgcatctctc ctgataaagg tgagttttta ataactaatc cttccactcg agaggttaga
      301 aaactgccaa tgattcctta tagggtcagg gaaagaatgt gttggggttt tggttatgat
      361 ccttttactg atgattacaa ggttgttgtt ggctttaatg agtctgagca tcatatgtgc
      421 tttcatgtgt tatctttgaa atcaaataaa aatggaaatt cattggggat tgcgattatt
      481 taa
//
LOCUS       XM_071831266             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841030), mRNA.
ACCESSION   XM_071831266
VERSION     XM_071831266.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139841030"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841030"
     CDS             1..591
                     /gene="LOC139841030"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687367.1"
                     /db_xref="GeneID:139841030"
                     /translation="MPPYKCRGRVCWGFGYDSSTDDYKLVVCFEESNHHIRFQVVSLK
                     SNKWKSLKPNKWKFVEHRDYLTYNTNTNTYACGFIYNGVLHWFLDDTKKKRKMIVSFD
                     LCLEKFKEIPLPNDTEYVRNNQDRLGMFEERLCICIFCAHHQTWVMKNCNGWQLLPPD
                     YQGNKYGAVTPAYKLDLTRDNTWGLCDDDKGNIDLS"
     misc_feature    19..>450
                     /gene="LOC139841030"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgcctcctt acaagtgcag gggaagagta tgttggggtt ttggttatga ttcttctact
       61 gatgattaca agcttgttgt ctgctttgag gaatccaatc atcatatacg ctttcaagtg
      121 gtatctttaa aatcaaataa atggaaatct ttgaaaccaa ataaatggaa attcgttgaa
      181 caccgggatt atttaactta caatactaat actaatactt atgcttgtgg ttttatatat
      241 aatggggtgc ttcattggtt cctggatgat acaaagaaga agagaaaaat gattgtttcg
      301 tttgatttat gtctagagaa attcaaagaa atacccttac ctaatgacac ggaatatgta
      361 aggaataatc aagacagact agggatgttt gaagaacgtc tatgcatatg catattctgt
      421 gctcaccacc aaacatgggt gatgaaaaac tgtaatggtt ggcaactgct cccacctgat
      481 taccaaggta ataagtatgg tgctgtcacg cctgcataca aactcgattt gactcgagac
      541 aacacttggg gtttatgtga tgatgataaa ggtaacatag atctgtcttg a
//
LOCUS       XM_071831267             651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841031), mRNA.
ACCESSION   XM_071831267
VERSION     XM_071831267.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139841031"
                     /note="uncharacterized LOC139841031; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841031"
     CDS             1..651
                     /gene="LOC139841031"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687368.1"
                     /db_xref="GeneID:139841031"
                     /translation="MPVICDPEQLPAPSPELWELYTDGAASSEGAGAGLILTGPHQEE
                     HTYALWFNFKVTNNEAEYEALLAGMRIARELGVKKLQAYVDSQLVANHINGTFNANDK
                     SMQSYLALVHSLADTFIDFRISQITRSQNKHVDVLSKLAALTFNHLEKKILVEQVFKK
                     STEPEVTVAYVEEEEATWMTDIIEFLRMGSLPENEREATKIRVKAPNYELRGQILY"
     misc_feature    52..426
                     /gene="LOC139841031"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(67..78,166..174,181..183,253..255,373..375,415..417)
                     /gene="LOC139841031"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgccagtaa tctgcgaccc tgaacaactc cctgcacctt ctcccgaact atgggagctc
       61 tataccgatg gcgcagcaag ttctgaaggc gctggtgcag gtctaatcct cacgggtcca
      121 catcaggaag agcatacata cgcgctgtgg ttcaacttca aggtgacaaa caatgaggca
      181 gaatatgagg cactactggc tggaatgcgc atagcccgag agttaggagt aaaaaagcta
      241 caagcctatg tggattcaca attagtcgct aatcatataa atggtacgtt caatgccaac
      301 gacaaatcta tgcaatcata cctggctctg gtccattctc tagcggatac attcatcgac
      361 ttcaggatca gtcaaatcac taggagccag aataaacatg tggatgtact cagtaagttg
      421 gcagctctca ccttcaacca tctggaaaag aagatattag tagagcaagt tttcaagaaa
      481 tccactgagc ccgaggtaac ggttgcatac gtcgaagagg aagaagcaac ctggatgacg
      541 gacatcatag aattcctgcg aatggggtcc ttacccgaaa acgaaaggga agcaacgaag
      601 atcagggtga aagcgccaaa ttacgaactg cgaggacaaa tcttatattg a
//
LOCUS       XM_071831268             561 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841032), mRNA.
ACCESSION   XM_071831268
VERSION     XM_071831268.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..561
                     /gene="LOC139841032"
                     /note="uncharacterized LOC139841032; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841032"
     CDS             1..561
                     /gene="LOC139841032"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687369.1"
                     /db_xref="GeneID:139841032"
                     /translation="MLRYIPNNQVVFIVNVYAPHLEHKKQLVWAHLDSMANNWPGPLC
                     FLGDFNSVCSPEERFRESIDQNSIDSFNTFIFQANLIDQTLSNDDFTWEGPLGKFSRI
                     DRVFINNKWVLLWPDAILQSSNPDRSNHKPLIWAKVLACWGPKPFRFNNTWFEKVGFI
                     QFCDNLWNEYIVDGWAAFRVNKKLRL"
     misc_feature    <1..336
                     /gene="LOC139841032"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgttaaggt acattcctaa caatcaagtt gtgttcatag tcaatgttta cgcccctcac
       61 ctcgagcaca agaaacaact cgtttgggca catttagata gtatggcaaa caattggccg
      121 ggccctttgt gttttttggg cgatttcaac tcggtttgtt cacccgaaga aagatttcgt
      181 gagtcaatcg atcaaaatag cattgattct tttaacactt ttattttcca agccaatctc
      241 attgatcaaa ccttatccaa cgatgatttc acatgggagg ggccactagg taaattctca
      301 cgcatcgata gagtttttat caacaacaag tgggttcttt tatggcccga tgcaatcctt
      361 caatccagta accctgaccg atccaatcat aaaccgttga tttgggccaa agtgttggct
      421 tgttgggggc ctaaaccctt ccgtttcaat aatacttggt ttgaaaaggt tggattcata
      481 cagttctgtg ataatctgtg gaatgaatac attgttgatg ggtgggctgc gtttagggtt
      541 aacaaaaagt tacgactgta a
//
LOCUS       XM_071831269             396 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg01250-like (LOC139841033), mRNA.
ACCESSION   XM_071831269
VERSION     XM_071831269.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..396
                     /gene="LOC139841033"
                     /note="uncharacterized mitochondrial protein
                     AtMg01250-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841033"
     CDS             1..396
                     /gene="LOC139841033"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg01250-like"
                     /protein_id="XP_071687370.1"
                     /db_xref="GeneID:139841033"
                     /translation="MVNWIMKCVSTTSFSLNVNRELHGFFQGKRGLRQGDPLSLYLFT
                     IVMEVLTLMLKREVSESELFKYHLKCDKLEIVNLCFADDLFLLSCTYKESVMVIANAL
                     EEFKLCSGLVPTLPKSTVFLANCSIATKN"
     misc_feature    <67..378
                     /gene="LOC139841033"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    103..105
                     /gene="LOC139841033"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggttaact ggattatgaa gtgtgtctca acgacatcgt tttctttgaa tgttaataga
       61 gagcttcacg ggttcttcca aggtaaaagg ggtttacgtc agggggatcc attgtctctg
      121 taccttttca ctattgttat ggaagtcttg actcttatgc ttaaaagaga agttagcgag
      181 tcagagttgt ttaaatatca tttgaagtgt gataaattgg aaattgttaa tctttgcttc
      241 gcagatgatt tatttttgtt atcgtgtact tataaagaat cggttatggt tattgctaat
      301 gctcttgaag aatttaaatt gtgttcaggt cttgtcccta ccttgccgaa aagtacagtg
      361 ttcctagcca actgttcgat tgctactaaa aattaa
//
LOCUS       XM_071831270            1878 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841035), mRNA.
ACCESSION   XM_071831270
VERSION     XM_071831270.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1878
                     /gene="LOC139841035"
                     /note="uncharacterized LOC139841035; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841035"
     CDS             1..1878
                     /gene="LOC139841035"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687371.1"
                     /db_xref="GeneID:139841035"
                     /translation="MTGININDDWESDPEKIKEAGFESFSNRFKKTEGCRTKYWSSSF
                     TKLSEDDNNSLCCTFEKEEIKQAVDFKKAFDCVCWDFLNDVMDLMNFSPKWRKWIFGC
                     LSSGRSSVLIRGSPTKEFSLEKGLRQGDPLSPFLFLIVCEALSVMLNDATRLGFYMGV
                     SVGKDAVHLSHLQIADDVLFFGDWSRGNIANLMDIISWFGMASELRINWSKSNFFSLG
                     IPQSAISDVAHAYNCSAGTLPFVYLGLPVGRNMNKISSWDVIINKFMGKLIPWKAKLL
                     SIGGRLTLIKSVLTNIPLYFMSLFRAPTNVINKLEAIRSIGSLKVKNLNLLAKWWWHL
                     KREKDVLWAKIIKSIYGSNGGLSDNSIACSSSIWNSVVKSGSVIDKAGVPFTTSIICK
                     LENGQNTMFWHDVWIPDSLQPLKDLFPRLYALDSDRGVSVANRTVNATDGLKGNWNWR
                     NNIRGRTHDELANLDDILALCSSTSTNDDCWSWRLSSKGIFKVHILSALIDNELMGCD
                     SRPIIVYSWPTCIPQKINIFAWRLLHNALATRTNLEKRGVTITSSQCPFCDGNQEVID
                     HIFVDCKFIVPLWRNVISWWQIKDSIPNGLNNAMSVASYRFDSGNASIFFLRQGSFSC
                     G"
     misc_feature    <202..741
                     /gene="LOC139841035"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(205..222,382..387,520..522,526..531,727..732)
                     /gene="LOC139841035"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(205..222,382..384,526..528)
                     /gene="LOC139841035"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    385..387
                     /gene="LOC139841035"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    <1549..1722
                     /gene="LOC139841035"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgactggta taaatattaa tgacgattgg gagtctgatc ctgaaaagat aaaggaagct
       61 ggttttgaat ccttttcaaa ccggttcaaa aagacagaag gttgtcgcac taaatattgg
      121 agcagttcct ttaccaaact atcggaggat gataataatt ccctctgttg tacgttcgag
      181 aaagaggaaa ttaaacaagc ggtagatttc aaaaaggcgt ttgactgcgt ctgctgggat
      241 tttttaaatg atgttatgga tcttatgaat ttctctccga aatggaggaa gtggattttt
      301 ggttgtttat cgtctggaag atcgtctgtt cttattcgtg gcagccctac aaaggagttt
      361 tctttagaga agggtttaag gcaaggcgat ccactctcac cttttttgtt tcttattgta
      421 tgcgaagcat tgagtgtaat gctcaacgat gctacgaggc tggggtttta catgggagtt
      481 tcggttggta aagacgcggt tcacctatca catcttcaaa ttgctgatga tgtcttattc
      541 tttggagatt ggtctcgtgg gaatatagct aatttaatgg atatcatttc atggtttggc
      601 atggcttccg agcttcgtat taattggtca aaaagtaatt tttttagcct gggtattcca
      661 caatctgcca tttctgatgt tgcgcatgct tataactgct cagcgggcac tctcccattt
      721 gtctacttgg gtttaccggt gggcagaaat atgaataaaa tttcttcttg ggatgtaatc
      781 atcaataaat ttatgggaaa gttgatccca tggaaggcga agttattgtc aatcggtggt
      841 aggctcaccc taataaaatc ggtgctaacc aatattccat tatattttat gtcattattt
      901 agagctccaa ccaatgtgat taataagtta gaggccattc gaagtattgg ttctctaaag
      961 gtaaaaaatt tgaaccttct agcaaaatgg tggtggcact taaaacgaga aaaggacgtg
     1021 ctatgggcga agatcataaa gtctatctat ggatcgaatg gaggtctgag tgataattct
     1081 attgcctgct cttcttcaat atggaattcg gttgtcaaga gcggctcggt tattgataaa
     1141 gctggtgttc ccttcactac ctccattatt tgtaagctcg aaaatggtca gaatacaatg
     1201 ttttggcacg acgtttggat cccagattcg ttacaacccc tgaaagattt atttcctagg
     1261 ttgtacgcgc ttgatagtga tcgtggtgtg agtgttgcca atcgaacggt taatgcgact
     1321 gatgggttaa aaggaaattg gaattggcgt aataatatcc ggggtagaac tcatgatgaa
     1381 cttgctaacc ttgatgatat cttggcttta tgttcttcaa catccacaaa tgatgactgt
     1441 tggtcatgga gactaagttc taaaggtatt ttcaaggttc atattctttc agctttaatt
     1501 gacaatgaat tgatgggttg tgattcccgt cctatcattg tgtattcatg gccaacgtgt
     1561 attcctcaaa agattaatat ctttgcttgg cgattattgc ataatgcttt ggctactcgt
     1621 actaacctag aaaaaagagg ggtgaccatc acatcatctc agtgtccgtt ttgtgatggg
     1681 aaccaggaag ttatcgatca catctttgtg gactgcaagt tcattgttcc gctttggaga
     1741 aacgttatat catggtggca aattaaagat tcgataccga atggtttaaa caatgctatg
     1801 agcgttgcta gttaccgttt cgattctggt aatgctagta tatttttttt gcgacaagga
     1861 tcgttctcat gtggctga
//
LOCUS       XM_071831272            1888 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139841037), mRNA.
ACCESSION   XM_071831272
VERSION     XM_071831272.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 64% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1888
                     /gene="LOC139841037"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139841037"
     CDS             1..1815
                     /gene="LOC139841037"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071687373.1"
                     /db_xref="GeneID:139841037"
                     /translation="MEEEYEAMEPEKEPIEVEYEISDEEIIDNATGIDTPIVGTTCKK
                     ETPGGSLYYAPIVDESLLPVVGKNYGTLEECEKMYRLYTFHACFDIRKSTQKTTKSGL
                     VKQKYYLCNRGGVPMQVNFDTLQSSKKPIRKSNMECTGCRARVKFDWVYGTNTFILSD
                     FQEHHNHELLPQEYRHLSKAERQMKYAEQLFVYHSSVSNIGPTKAYEVYSNMKGSEKN
                     VHGTVTDFRNWRRDLNVFINASDSQMLVNKMEEQKKYVPGFSFEYKLEKSQLHSIFWA
                     DEVAKCNYKEFSDIISFDATYRTNRYNMKFVPFTGIDNHHRCVTVAARLIRDETAESY
                     TWLLTCFMKTFGKEPNMIVRDQDKSMAIAIKAVFKTAKHRLCMWHIMRKVPSKIQEAI
                     PTIEDEVEKDFKNRLNKLVWNMYIEPNVFEERWEKLMHDFSLKNDSWFKHMFDIRSTW
                     IPAYFIDTEMFGLMRTTSRSESENAFFSNFTRSAANLLTFMDGFESAMLKQRSKQESL
                     DAQTIKKNPKLLTQLKIEKHALKVYTHAIFAIVQKEIYEALYSCLLDKMDKEEETEIY
                     VGKEEKEKTKEGSNEEKQFFHYKTLFLGFKEQEHRRNP"
     misc_feature    172..>1695
                     /gene="LOC139841037"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggaagaag aatacgaagc aatggagcca gaaaaagaac caattgaagt agaatacgag
       61 atcagtgatg aagaaattat agataacgct acaggtatag atacaccaat agtaggtaca
      121 acatgtaaaa aagaaacacc aggtggttca ttgtattatg caccaatcgt tgatgagagt
      181 ttactaccag ttgttggaaa aaattatgga acacttgaag agtgtgaaaa aatgtatagg
      241 ttatacacgt ttcatgcatg ttttgacata cgaaagtcaa ctcaaaagac tacaaaatct
      301 gggttggtga agcagaaata ttacttgtgc aatagaggtg gtgtgccaat gcaagtgaac
      361 tttgacacat tgcaaagtag taaaaagcca attaggaaaa gcaacatgga atgcaccgga
      421 tgtagggcta gggttaaatt cgattgggtg tatggaacta atacgtttat actgtccgac
      481 tttcaagaac accataatca tgagttgcta ccccaagagt atcgacattt aagtaaagcg
      541 gaaagacaga tgaagtatgc agagcagttg tttgtatacc attcgtcagt gtcaaatatt
      601 ggtccaacaa aagcatacga agtttatagc aatatgaaag ggtctgagaa aaatgtgcat
      661 gggactgtaa ctgatttcag aaactggaga cgagatttga atgtttttat caatgcaagt
      721 gattctcaaa tgctcgttaa caaaatggaa gaacagaaga aatatgttcc tggtttttca
      781 tttgagtaca agcttgaaaa aagtcaacta cattcaattt tctgggccga tgaagttgca
      841 aaatgcaact acaaggagtt tagtgacata atctcatttg atgcaacgta tagaacgaac
      901 aggtacaaca tgaaatttgt accatttact ggcatagata accaccatag gtgtgtcact
      961 gttgctgcga gattgatcag ggatgaaaca gccgagagtt acacatggct tcttacatgt
     1021 ttcatgaaga cattcgggaa agagccaaac atgatagtga gagatcagga caaatcaatg
     1081 gcgatagcga taaaagcagt ttttaagacg gcaaaacata gactatgcat gtggcacatt
     1141 atgcgaaagg tgccatcaaa gattcaagaa gcaattccta ctattgaaga tgaagtagaa
     1201 aaagacttca agaatagact taataagctt gtttggaata tgtatatcga accaaatgtt
     1261 tttgaagaaa gatgggaaaa gttgatgcac gatttctcat tgaaaaatga tagttggttc
     1321 aaacatatgt ttgatattag atcaacttgg ataccagcat attttatcga cactgaaatg
     1381 tttggtttga tgcgaactac ttcaagatct gagagtgaga atgctttttt ttcaaacttt
     1441 acaagatctg cagcaaatct gttaactttt atggacggct ttgaatctgc aatgttaaaa
     1501 cagaggtcaa agcaagaatc tttggatgca cagacaatca agaaaaatcc aaaattgtta
     1561 actcagctga aaattgaaaa gcatgcatta aaggtttaca cacatgctat ttttgcaatc
     1621 gttcaaaaag agatttatga agcattgtat agctgtttat tggataaaat ggacaaggag
     1681 gaagaaacgg aaatctatgt tggtaaagag gaaaaagaga agacaaaaga gggttcgaat
     1741 gaagaaaaac agttcttcca ttacaagaca ctgtttttgg gttttaaaga acaagaacat
     1801 agaagaaatc cctgaaaaat acataatgag acgttggaga agggacataa taccacccga
     1861 gttaagatca aggagaaata gatatggc
//
LOCUS       XM_071831273             453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841038), mRNA.
ACCESSION   XM_071831273
VERSION     XM_071831273.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..453
                     /gene="LOC139841038"
                     /note="uncharacterized LOC139841038; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139841038"
     CDS             1..453
                     /gene="LOC139841038"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687374.1"
                     /db_xref="GeneID:139841038"
                     /translation="MLHKLGRIDEDVSHRIKVGWVKWRAATGVLCDRKIPLNLKGKFY
                     KVAIRPVMLYGSECWPMTKAQKRRIEVAEMRMLRWTCDKTILDMIPNRVFRENLKVSN
                     IIDKLREERLRWFVHVRRRPLTAPVRRVKALTVDGVRRRGRPTHRWGG"
ORIGIN      
        1 atgctccaca aattggggag gatagatgaa gacgtgtcac accgtattaa agtagggtgg
       61 gtgaagtgga gagcagcgac tggagtctta tgcgacagga agattcccct aaacctgaaa
      121 gggaaattct acaaggtggc aattagacct gtcatgcttt acggatcaga gtgttggcca
      181 atgacgaagg cgcaaaagag aaggattgag gtggcagaga tgagaatgct taggtggaca
      241 tgcgataaaa cgatattgga tatgattcca aatagagttt ttagggaaaa cctgaaagtt
      301 agtaacatca ttgacaagct aagagaagaa cggcttcgat ggtttgtaca tgtgaggagg
      361 cgacctctta ctgcacctgt taggagagtc aaggcactta cagttgacgg tgtaaggaga
      421 aggggtagac ctacacatag gtggggagga tag
//
LOCUS       XM_071831274             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841039), mRNA.
ACCESSION   XM_071831274
VERSION     XM_071831274.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139841039"
                     /note="uncharacterized LOC139841039; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841039"
     CDS             1..606
                     /gene="LOC139841039"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687375.1"
                     /db_xref="GeneID:139841039"
                     /translation="MEAIGPTIFSDVNDYWQCRLLLNGVFSVSSLRKLIDASPMGSWP
                     THWCKVVPSNINFFIWRARLNRLPDKCNLIDKGVSMQDVLCSACNAHGEDLPHIFFNC
                     DTASQVWNNIAAWIDLTIPVWNSVNDIWQWIMTSSMPPTKMIVLEVICYSTLWPLWCF
                     RNACIFDLSSFKKCHILDFIVSSSFDWLSSRYKKANLNWNI"
     misc_feature    76..324
                     /gene="LOC139841039"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaggcta tcggtcctac aattttttca gatgttaacg actattggca atgtcgtctt
       61 ctactgaatg gcgtgttctc tgtttcaagt ttacgcaaac tgattgatgc ttctcctatg
      121 ggtagttggc caactcattg gtgtaaagta gtgccctcta atatcaactt tttcatttgg
      181 cgtgcaaggt tgaatagatt accggataaa tgtaacttga ttgataaagg agtctctatg
      241 caggatgtgt tatgctcggc ttgtaatgct cacggtgaag atttacctca catttttttc
      301 aattgcgata ctgcttctca ggtatggaat aatattgctg cttggattga tctaactatt
      361 cctgtttgga actctgttaa tgacatatgg caatggatca tgacgtcttc tatgcctcct
      421 actaagatga tcgtattgga agtcatttgt tattctactc tatggcctct ttggtgcttc
      481 agaaatgctt gcatctttga tctgtcaagt tttaaaaaat gtcatatttt agatttcatt
      541 gtatcttcct cttttgattg gctctcttct cgttataaga aggcaaatct taattggaat
      601 atttag
//
LOCUS       XM_071831275             594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 17.3 kDa class I heat shock
            protein-like (LOC139841040), mRNA.
ACCESSION   XM_071831275
VERSION     XM_071831275.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..594
                     /gene="LOC139841040"
                     /note="17.3 kDa class I heat shock protein-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 88 Proteins"
                     /db_xref="GeneID:139841040"
     CDS             48..506
                     /gene="LOC139841040"
                     /codon_start=1
                     /product="17.3 kDa class I heat shock protein-like"
                     /protein_id="XP_071687376.1"
                     /db_xref="GeneID:139841040"
                     /translation="MSIVPRLFSGRRSSIFDPFSLDIWDPFKDFQIPSSSSEASALVN
                     TRVDWKETPEAHVFKADLPGIKKEEVKVEVEDGNVLQISGERNFEKEDKNDKWHRVER
                     SSGKFTRRFRLPENTKMDHIKAAMENGVLTITVPKNEVKKPDVKSIDISG"
     misc_feature    183..458
                     /gene="LOC139841040"
                     /note="Alpha crystallin domain (ACD) found in
                     Saccharomyces cerevisiae (Sc) small heat shock protein
                     (Hsp)26 and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally active as...;
                     Region: ACD_ScHsp26_like; cd06472"
                     /db_xref="CDD:107229"
     misc_feature    order(183..203,222..224,228..230,234..239,303..305,
                     318..320,327..353,357..359,372..374,429..437)
                     /gene="LOC139841040"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:107229"
ORIGIN      
        1 aatcaagtta acttttctct agcacaaacc atcttattaa tcaaacaatg tcaatcgttc
       61 caaggttatt cagtggccga cgaagcagca ttttcgaccc attttctctc gacatttggg
      121 atccattcaa agacttccag attccatcgt catcatccga agcatctgca ttggtaaaca
      181 cccgcgtgga ctggaaagaa acgcccgaag ctcacgtgtt taaggccgat cttcccggga
      241 ttaaaaaaga agaggtcaaa gttgaagttg aagacgggaa tgtgttacaa ataagcggtg
      301 agaggaactt cgaaaaagaa gataagaatg ataaatggca tcgtgttgaa cgaagcagcg
      361 gaaagttcac aaggaggttt aggctgccgg agaacacgaa aatggatcat atcaaagcgg
      421 ctatggaaaa cggagtgctg acaattactg tgccgaaaaa cgaagttaaa aaacctgatg
      481 tgaagtcaat tgatatctct ggttaaataa atctaccaat ttacacatat catcaagtcc
      541 atgagtatct gagtgtttaa tatgtgtttg tgtgatgtcc ttttgtgttt tact
//
LOCUS       XM_071831276             786 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841041), mRNA.
ACCESSION   XM_071831276
VERSION     XM_071831276.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..786
                     /gene="LOC139841041"
                     /note="uncharacterized LOC139841041; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841041"
     CDS             1..786
                     /gene="LOC139841041"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687377.1"
                     /db_xref="GeneID:139841041"
                     /translation="MNILSVNIGGGASFSCKQSWIRGLCNEFKINVLGIQETKLTKMD
                     LFIARAFWGNNSFDVACSVARGRSGGLLTLWDPSSFIKSQVFSYENVLFIKGSRPSSE
                     NRCYIANVYAPQDRASKIRLWNLIYDFMVNNSGDYFIFGDFNSVRGAHERFGLSFCPL
                     SANDFNEFIISSCLIDFPLGGRNFTRTSKSCDSWARLDRFRLSNNAINSCPNLVGRIL
                     PNLWSDHCPIVLYSDRLNYGPSPFKLFASWFLLEGFAKVVNDA"
     misc_feature    61..690
                     /gene="LOC139841041"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(109..111,331..333,424..426,430..432,592..594,
                     670..675)
                     /gene="LOC139841041"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(109..111,670..672)
                     /gene="LOC139841041"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(331..333,430..432,673..675)
                     /gene="LOC139841041"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaatatct tgtccgttaa tattggtgga ggagcgagtt tcagttgtaa gcaatcttgg
       61 attcgtggtc tttgtaatga gtttaagatc aacgttttgg gtattcaaga aacgaagtta
      121 actaagatgg acctgtttat cgctcgtgca ttctggggta ataattcatt tgatgtagct
      181 tgctcggttg ctcgtggaag atcagggggt ttactcactc tttgggaccc ttctagtttc
      241 attaaatctc aagtattttc gtatgaaaat gtgctattta ttaaaggttc tcgtcctagt
      301 tcggaaaatc gttgctacat tgccaatgtt tatgctcctc aggatcgagc ttctaaaatt
      361 aggttatgga atcttatcta tgatttcatg gttaataata gtggagacta tttcatcttt
      421 ggtgacttta actctgttcg aggtgctcat gaaagatttg gattatcctt ttgtcccctt
      481 tcagctaacg attttaatga attcatcatt tcctcttgtc ttattgattt tcccttgggt
      541 ggtaggaact ttacaagaac aagtaagtct tgtgacagtt gggcaagatt ggatcgtttt
      601 cgtctttcta acaatgcaat taattcatgt ccgaatttag ttgggcgtat tctaccaaac
      661 ttatggtcgg atcactgccc cattgtcctc tatagtgatc gtttgaacta tgggccatca
      721 ccttttaagc tatttgcttc ttggtttttg ttggaaggtt ttgctaaggt tgttaatgat
      781 gcttag
//
LOCUS       XM_071831277             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841042), mRNA.
ACCESSION   XM_071831277
VERSION     XM_071831277.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139841042"
                     /note="uncharacterized LOC139841042; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841042"
     CDS             1..783
                     /gene="LOC139841042"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687378.1"
                     /db_xref="GeneID:139841042"
                     /translation="MGYSGGDAYSSVTLINKLNFGDPLYLHPSDTTSGTPIISIKLKG
                     TENYNIWSTSMILALGTINKLGFINGTCVKSTTDDVLSAQWDRCNTVVLSWILATLTE
                     EVYSGQIFNSLALNVWNDLKETYDKKDGSIIFNLHHKINSLKQNDSPLSEYYHNLNSL
                     WKQYDSMVSSPPYTCGAPYIIDGINRRQKCSKVFNQTENKDIVAVARDRKETEMGIRS
                     CSNRKFDGGSLKRVFDKKKKKMIEGYDSRWLLEINQWWLSCG"
     misc_feature    79..222
                     /gene="LOC139841042"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    349..>501
                     /gene="LOC139841042"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgggatata gtggaggtga tgcttactca tctgtaacct taatcaataa acttaatttt
       61 ggtgaccctt tatatcttca tccaagtgat acaacttctg gtacaccaat tatttctata
      121 aaacttaaag gcacggaaaa ctacaatatt tggagtacat caatgattct tgcattaggt
      181 actataaata aacttggttt tattaatgga acatgtgtta aaagtacaac agatgatgta
      241 ttgagtgctc aatgggatag gtgtaacaca gttgtattgt cttggatttt ggcaactttg
      301 actgaagagg tttattcagg tcaaattttt aatagtcttg ctttaaatgt gtggaatgat
      361 ttgaaggaaa cttatgataa aaaagatggg tctattattt tcaatttgca tcacaagatc
      421 aactcattaa aacaaaatga tagtccccta tctgaatatt atcataacct taatagcttg
      481 tggaaacaat atgattctat ggtgtcctca ccaccctata cttgtggtgc gccttacatc
      541 atagatggta taaatcgaag acagaagtgc agcaaagtat tcaatcaaac agaaaacaaa
      601 gacatagttg cagtagctcg cgatagaaag gaaacagaaa tgggaataag aagctgtagc
      661 aacaggaagt tcgatggtgg aagtttaaag agggtgttcg acaagaaaaa gaaaaagatg
      721 atagaaggtt atgactctcg atggttattg gagattaatc aatggtggtt gtcgtgtggt
      781 tga
//
LOCUS       XM_071831278            1483 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UPF0481 protein
            At3g47200-like (LOC139841044), mRNA.
ACCESSION   XM_071831278
VERSION     XM_071831278.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1483
                     /gene="LOC139841044"
                     /note="UPF0481 protein At3g47200-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841044"
     CDS             1..1332
                     /gene="LOC139841044"
                     /codon_start=1
                     /product="UPF0481 protein At3g47200-like"
                     /protein_id="XP_071687379.1"
                     /db_xref="GeneID:139841044"
                     /translation="MSVEDDKPHSEELQDGAWVESIAKARAPSSANVRAHRVPSMVKE
                     IHDYEKYYVPKVVSIGPYHFGNKKLELVQNLKPIFTMKLLLNDKETLKFLYDKLGEPN
                     MVQQLRNFYEEGSTGRFSDKLFTRIMLIDACFILYYIRNIFGVKYDDCEELQSHQIVY
                     VYHDLFLLENQVPFKVLQEVMNVLPQECVKIEEFISGNILSCERINKKWFDLNNIDHL
                     LHLLHCSLTKRGEDPNRKLEPPIKYTFRNVNELADVGIQFKKSVTNSLSHIEFFRSSW
                     WRFSASVKIPSITVDDSTKPMLLNLLAFEMCSHNAHGSWVTSYICFLDSLIDHPEDVK
                     TLRKAGVLDTLESDDDVTKLFNDIGIDLVPNNLAYVEAKNKIQKHYESWRNTSFSQFK
                     HEYVKSPWSFVALLGALLALALSGVQTYYTIWSPKGECDDLCMFLKMNHHL"
     misc_feature    106..1209
                     /gene="LOC139841044"
                     /note="Plant protein of unknown function; Region: DUF247;
                     pfam03140"
                     /db_xref="CDD:460823"
ORIGIN      
        1 atgagtgtag aagatgataa accacatagt gaagagctac aagatggagc atgggtcgag
       61 tcgattgcca aggccagagc cccatcatca gcaaacgtac gagcccatag agtcccatca
      121 atggtgaaag agatacatga ctatgaaaag tactatgttc cgaaggtcgt ttccattgga
      181 ccataccatt ttggcaacaa gaaacttgag ttggttcaga acctcaagcc tatttttaca
      241 atgaagcttc ttctgaatga caaggagacc ctcaagttct tatacgataa gcttggtgaa
      301 ccaaatatgg tgcaacaatt aagaaacttc tatgaagagg ggtcaacagg ccggttctcc
      361 gataagttat tcactaggat aatgttgatt gatgcttgtt ttattttgta ttatattcga
      421 aacatctttg gagtaaaata cgacgattgt gaagagttac aaagccatca aattgtgtat
      481 gtctatcatg atttgttctt gctcgaaaac caagttccat tcaaagtact acaggaggtg
      541 atgaatgtgc tacctcaaga atgtgttaag attgaagaat tcattagtgg caatatatta
      601 tcatgtgaaa gaataaataa gaagtggttt gacttgaata acattgatca tcttctccat
      661 cttcttcatt gtagtcttac caaaagaggc gaagatccga acagaaaatt agaaccaccc
      721 attaagtata cttttcgaaa tgttaacgag cttgcagatg tagggattca attcaagaaa
      781 agtgtgacta attctttgtc tcacattgag ttctttcgaa gcagttggtg gcgcttttca
      841 gcgagtgtca aaatcccttc cattacggta gacgattcca ccaagcccat gttgttaaac
      901 ctactagcct ttgaaatgtg ctcgcataat gcacatggtt catgggttac ctcctacata
      961 tgttttcttg attctttaat tgatcaccct gaagatgtta agactcttcg aaaagccggg
     1021 gtgcttgaca ccctagagag cgatgatgat gttacgaaac ttttcaatga tatagggatt
     1081 gatttagtgc caaacaattt agcttatgtt gaagctaaga ataagataca aaagcactat
     1141 gaaagctgga ggaacacaag tttttctcaa ttcaaacatg agtatgtgaa aagcccatgg
     1201 tcatttgttg cacttcttgg agctttgctg gctcttgctc ttagtggtgt tcaaacatac
     1261 tacactatat ggagtcctaa aggtgagtgt gatgatcttt gcatgttttt gaagatgaac
     1321 catcacttat aagatcttca tttcatattg cattgttttt ttatttgttt gtgtgttgtg
     1381 tttacaaaag agtgcttgca tgtgtgttgt gtattttaat ttctaataag tcttatatat
     1441 ggtgagcagc attgtctatt ttgtagtatg aactatttat tgt
//
LOCUS       XM_071831279            1392 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841045), mRNA.
ACCESSION   XM_071831279
VERSION     XM_071831279.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1392
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1392
                     /gene="LOC139841045"
                     /note="uncharacterized LOC139841045; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841045"
     CDS             1..1392
                     /gene="LOC139841045"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687380.1"
                     /db_xref="GeneID:139841045"
                     /translation="MLLDLSAKNKVGFVKGTLLKNDDNEVLAAQWDKCNSVVLSWLLS
                     SISEELYSGQIFSATASVVWSELKETYDKVDGSITFNLHQKISSIKQNGSSLSEYYHK
                     LNTLWKQYDEMVKLPECVCTAAPEFLQHNKVLKLMQFLMVLDDVYMSIRSNIFLKDPL
                     PDVKSVFAILSREELHKWVSRVGTSKSQNSAFVAQTNDNSWSNRNSKLVILEGKEVLI
                     GVLTLILNALNATNLDTPLIGVLKFSTTSSSNIGSTNSCISVPMSLSSEQMMKLLSML
                     NEKGPQTSESVSNMSDSGANQYMTISEQGLDNVVDVSELNLQVSHPNGTKVKVKKIGN
                     LRLNKDIILTDMLIIPGYCDLKTRTTYIHDLKTTTTLGTGSVNGGMYSFDYYKGEPLM
                     WNSVYACNFESVILGHPSSPVLNILKHKLNLDKIVEDIPCETFLKAKHVKDHFPLSDH
                     VTKELGELIHMNL"
     misc_feature    115..342
                     /gene="LOC139841045"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atgcttctgg atttatcagc taaaaacaaa gtaggttttg ttaaaggaac cttgttaaaa
       61 aatgatgata atgaagttct tgctgcccaa tgggataagt gtaattctgt tgtcttgtct
      121 tggttattaa gctctatatc tgaggaatta tactctggac aaatattctc tgctactgct
      181 tctgttgttt ggtctgaatt aaaggaaaca tatgataagg tagatggatc tataaccttt
      241 aatttgcatc aaaaaattag ctctataaag caaaatggta gtagtttgtc agaatattat
      301 cataaactaa acaccttgtg gaaacaatat gatgaaatgg ttaaacttcc tgagtgtgtt
      361 tgtactgctg cccctgaatt tctacaacat aacaaagtct taaaattgat gcaatttctt
      421 atggtacttg atgatgttta catgtctatt agaagtaata ttttccttaa agatcctttg
      481 cctgatgtta agtctgtatt tgccattctt tcaagagaag aattacacaa gtgggtttct
      541 agggttggta catctaagtc tcaaaactct gcctttgttg ctcaaactaa tgataactca
      601 tggtcaaaca gaaatagtaa actggtaata ttggagggga aagaagtttt aataggggtc
      661 ctaaccctaa tcttaaatgc actaaatgca acaaacttgg acacaccatt gattggtgtt
      721 ttgaaatttt ccactacatc ctcttctaat attggttcta ctaactcttg tatttctgtt
      781 cccatgtctt tgagtagtga acaaatgatg aagcttttaa gcatgcttaa tgaaaagggc
      841 cctcaaacct ctgaatctgt ctctaatatg tcagactctg gggctaatca atatatgact
      901 atctctgaac aaggtcttga taatgttgtt gatgtgtctg aattaaacct acaagtctca
      961 catcctaatg gtactaaagt taaggttaaa aaaattggaa acctaagatt aaataaggac
     1021 attattctaa ctgatatgtt aattatccct ggatattgtg atttgaaaac aagaactacc
     1081 tacattcacg atttgaaaac aacaactacc ctggggactg gtagtgtgaa tggtggcatg
     1141 tattcctttg actattataa aggtgaacct cttatgtgga actctgtgta tgcttgtaat
     1201 tttgaatctg ttatattagg gcacccctct agtcctgtcc ttaacattct taaacataaa
     1261 ctaaatcttg ataaaattgt tgaagatata ccttgtgaaa ctttcttaaa agctaaacat
     1321 gttaaagacc attttccctt aagtgatcat gtgactaaag aactcggtga acttattcat
     1381 atgaatttgt ag
//
LOCUS       XM_071831280            3306 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841046), mRNA.
ACCESSION   XM_071831280
VERSION     XM_071831280.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3306
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3306
                     /gene="LOC139841046"
                     /note="uncharacterized LOC139841046; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841046"
     CDS             1..3306
                     /gene="LOC139841046"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687381.1"
                     /db_xref="GeneID:139841046"
                     /translation="MKKLKPSRKEEAGGRKEVPDGCQNIFRWKANKRRRLGLACNVSQ
                     VQEVCEICGDPSHFAYGCRNGIPPVNQHIVEEQVNEVQGRRYDPYFNTYNPGWRNHPN
                     FSWSNNNAMNANQGNQLRPQNNFQNQDNFQNEGNYQRNYQNPYPNNRNQNQNNYQNQG
                     QNQNQNQNSTSTNKPSSSDAKMDAFIFEMRKMIEVQNKSIGALAKEIGNVVESKGNRG
                     PGTIPSYAVLNLNHKDQGKGHSINIVGTLRSGKKYDNKVGEKEVVQPEPSKSPIVLDE
                     EEVSEVDDQGEGVKNKDPIVNETGKLETESKSVPFPKALESPNQFPYGKKGTTTRGHD
                     LCTQKRKQRATLPKKVELTEHLSAVVSGTLPPKFKDPGTPLIAVTVGNVNVKKALLDL
                     GASINILPFCLVDRFELGLMKRTDIIIQLADQSIKMPRGILEDVIVKVEDFYYPVDFV
                     VMDIEPRNRDAQPTIILGRPFLATINAHINFRTGTDGTLPVIIASNLTSVQEKALMEV
                     LHKYKAAVGWTIADLKGISPSVCMHRIVTDPEVKPAHDTQRRLNPNMQEVVKKEVLKW
                     LDAGIIFPISDSQWVSPTQTVPKKAGITVMETEEGEKITTRPVMGWRVCIDYRKLNAA
                     TSKDHFPLPFIDQIIEKLSDAPFDFNDQCKEAFNTLKHKLNEAPILQSPDWTKPFEIM
                     CDAGDFTAGAVLGQRVDRKPVVIYYASKTFSDAQVNYTTTEKELLAVVFALDKFRSYL
                     WGSKVVVFSDHSALRHLLEKKESKPRLISWILLLQEFDLEIRDKKGIENVVADHLPRI
                     PPPPFDPTKPIQENFLDECLFSVVQDPVLCRIGPDQIIRRCVAEDEHKDILAHCHTFA
                     CGGHYGVKKTGYKVLDSGFFWPTIFKDAYFMGPFPPSFGFEYILVPVDYVFKWVEAEA
                     TRTNDHKVVLKFVKKNIFCRHGVPKAIISDGEKTVNLNRKDWSLRLDDALWAYRTAYK
                     TPIGTSPYQLVYGKVNMNMNMDEAGKARKLDLSTLDELRGDAYESSKIYKEKTKAFHD
                     KQIVRRTFEVGQSVWLFNSRLKLFAGKLRSKWNGPYVVTKVTPYGAIEIKDPKGGEPF
                     LVNGQRLKIASGL"
     misc_feature    1126..1419
                     /gene="LOC139841046"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1171..1173,1177..1179,1183..1185,1255..1263,
                     1396..1398)
                     /gene="LOC139841046"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1171..1179
                     /gene="LOC139841046"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1171..1173
                     /gene="LOC139841046"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1255..1266,1276..1287)
                     /gene="LOC139841046"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1708..>1977
                     /gene="LOC139841046"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    2038..2385
                     /gene="LOC139841046"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty3; cd09274"
                     /db_xref="CDD:260006"
     misc_feature    order(2050..2061,2158..2166,2173..2175,2248..2250,
                     2347..2349)
                     /gene="LOC139841046"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260006"
     misc_feature    2524..>2649
                     /gene="LOC139841046"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgaaaaaac tgaagcccag ccgtaaggag gaggctgggg ggcgcaagga ggtgcctgat
       61 gggtgccaaa atatcttcag gtggaaagct aacaaaagga ggcggctggg tcttgcttgt
      121 aatgtttcgc aagttcagga agtatgtgag atttgtggag atccttctca ctttgcatat
      181 ggatgtagaa atgggattcc accggtaaat cagcacatag tagaagaaca agttaacgag
      241 gttcagggac ggagatatga tccatacttc aacacgtata atccggggtg gagaaatcat
      301 cctaatttca gttggagcaa taacaatgct atgaatgcta accaagggaa ccaacttaga
      361 ccacaaaaca actttcaaaa ccaggataac tttcagaacg aaggcaacta ccaaagaaac
      421 tatcaaaatc cttatcccaa caaccgaaac caaaaccaaa acaattatca aaaccaaggc
      481 caaaaccaaa accaaaatca aaacagtact tcaactaata agccatctag ctcggatgct
      541 aagatggatg cgttcatctt cgaaatgcga aaaatgatag aagtgcaaaa taagtcgatt
      601 ggtgcattgg ctaaggagat cggtaatgta gtggaaagta agggaaatag gggaccaggt
      661 acaattccaa gctacgcagt tctaaatcta aatcataagg atcagggaaa agggcatagc
      721 attaacattg taggtacctt gagaagcgga aagaagtatg acaataaggt aggtgaaaaa
      781 gaggtagtgc aaccagagcc aagtaagtct cctattgttc ttgatgagga agaggtaagt
      841 gaagtcgatg accaaggaga aggggtgaaa aataaggacc caattgttaa tgagaccggg
      901 aaactggaga cggaatcaaa atccgtccca tttcccaagg ccttagagtc cccaaaccag
      961 ttcccttatg ggaaaaaagg gaccacaacc agaggacatg acctttgcac tcaaaagagg
     1021 aagcaaaggg cgactttacc caaaaaggtg gagctaaccg agcacctaag tgcagttgtt
     1081 tcgggtacac ttccacctaa gtttaaggac ccagggaccc cgttgatagc tgtgactgta
     1141 ggaaacgtga atgtgaaaaa ggcattattg gacctaggag ctagcattaa tattttacct
     1201 ttttgtctag ttgaccgatt tgaattgggt ttaatgaaaa gaactgacat aattattcag
     1261 ctagcggacc agtcaatcaa aatgcctagg gggatattag aagatgtgat agtaaaagtg
     1321 gaggatttct attacccagt tgactttgtt gttatggata ttgaacctag gaatagagat
     1381 gcccaaccca ctataatttt gggacgcccg ttcttggcca ccattaatgc tcacattaat
     1441 tttcgaacgg gtactgacgg tactttgcca gttattattg cttcaaattt gacaagtgtg
     1501 caggaaaaag ccttgatgga agtgcttcat aagtacaagg ctgcagtagg gtggacgata
     1561 gctgatttga aagggataag tccctcagtg tgtatgcata ggatagttac agatccggag
     1621 gttaaacctg ctcatgatac gcaacgcagg ttaaacccga atatgcagga agttgtaaag
     1681 aaggaagttc tcaagtggtt agatgcaggg attattttcc ctatttcaga tagtcagtgg
     1741 gtaagcccca cgcaaacagt gccaaagaaa gctgggataa cagtaatgga aactgaggaa
     1801 ggtgaaaaga tcacaacccg tcccgtgatg ggttggcggg tatgtattga ttacaggaag
     1861 ctgaatgctg cgacttcaaa agatcacttt cccttgcctt ttattgatca aatcatcgaa
     1921 aagttgtcag acgcaccttt tgactttaat gaccaatgta aggaggcctt taacaccctt
     1981 aagcataagt tgaacgaagc acccattttg caatcacccg attggaccaa accatttgaa
     2041 attatgtgcg acgctggtga ttttacggct ggggctgttt tgggtcaaag agttgatagg
     2101 aaaccggttg ttatctatta tgctagtaag acattctcgg atgcccaggt gaactatacc
     2161 acaaccgaga aagaattatt agcagtagtg tttgccttag acaaatttag atcgtatttg
     2221 tgggggtcta aggtagttgt cttttcagac catagtgccc taaggcactt gcttgagaag
     2281 aaagagtcta agcctagatt gattagctgg attttgttgc tacaagagtt tgatttggaa
     2341 ataagggata aaaagggtat agagaatgtg gtagccgacc atttacctag gatacccccg
     2401 ccaccgtttg accctactaa accgatccag gagaatttcc tggatgagtg tttgtttagt
     2461 gttgtacagg acccagttct ttgccgaatt ggacccgatc aaatcataag aagatgtgtg
     2521 gcggaagatg agcataagga cattctagct cattgtcata cttttgcatg tggaggacac
     2581 tacggagtca agaaaaccgg gtacaaagta ctcgactcag gtttcttttg gcctactatt
     2641 tttaaagacg catattttat gggacccttt ccaccttctt ttgggtttga gtatatacta
     2701 gtacccgttg attatgtctt caagtgggtg gaggctgaag ctactcggac caatgaccac
     2761 aaagttgtcc taaagtttgt taagaaaaat attttttgtc gtcatggtgt acctaaggcc
     2821 ataattagtg atggagaaaa aaccgtaaat cttaatcgca aagattggtc tttaagacta
     2881 gacgatgcgc tttgggctta ccggacagct tataaaaccc ctattggtac ttcaccttat
     2941 caacttgttt atgggaaggt gaacatgaac atgaacatgg atgaggcagg aaaagcaaga
     3001 aagttagacc tatcgacgct ggatgagttg agaggcgatg cttatgaaag ttcaaaaatt
     3061 tacaaagaga aaacgaaagc atttcatgat aagcaaatcg taaggcggac gtttgaagtg
     3121 gggcaaagtg tgtggttgtt taattcaagg ctaaagttat ttgcgggtaa gttgagaagt
     3181 aagtggaatg gtccctatgt ggttaccaag gttactccgt atggggcaat tgaaataaaa
     3241 gatccaaaag gtggggaacc gttcttagtt aatgggcaac gattgaaaat tgcttccggt
     3301 ttgtag
//
LOCUS       XM_071831282            1347 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UPF0481 protein
            At3g47200-like (LOC139841047), mRNA.
ACCESSION   XM_071831282
VERSION     XM_071831282.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1347
                     /gene="LOC139841047"
                     /note="UPF0481 protein At3g47200-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139841047"
     CDS             1..1347
                     /gene="LOC139841047"
                     /codon_start=1
                     /product="UPF0481 protein At3g47200-like"
                     /protein_id="XP_071687383.1"
                     /db_xref="GeneID:139841047"
                     /translation="MTEGIRSIEATDENTHEEWLGSILKTKSPPSSTTQIHKVPMILK
                     EHQNHGKYYVPKVVSLGPYHYGNANLESVHNFKLLFTNKLMKEDMDSIQGLFNKLFEM
                     VHILRGYYEDKGNLFSDDEFIRMMLLDGCFILYFIKHIYFPAETAFLGMKSHQIMFVQ
                     QDMFLLENQIPYKVLVEVMKFVPADDWDFKIRRIIDDNILAPERRDNTRNHPHKNLLT
                     KEIPDNTNHLLELLQTRLTKVKTCIAGKYDRYTFRNVNELLEVGIRFTPSKIRSLAHI
                     NFTKHGFCANVELPPITIDDSTRPLLLNLIAYEMCSNDTQLSWVTSYICLLDSLIDHS
                     EDVKILRKAGILDNRLGSDDEVAQLFNEIGTDLVPNNLAFSLARSEIQKHYESKRNTW
                     MSQLKHEYIKTPWAFVALLVGLVGLFLSSVQTYFSVWGGKNHCDSFCLALKMNHRH"
     misc_feature    106..1227
                     /gene="LOC139841047"
                     /note="Plant protein of unknown function; Region: DUF247;
                     pfam03140"
                     /db_xref="CDD:460823"
ORIGIN      
        1 atgacggagg gtattcgaag cattgaagcg accgatgaaa acacccatga agaatggcta
       61 ggttcgatat tgaaaaccaa gtcgccgcct tcttctacaa cgcaaataca caaagtgccg
      121 atgatcttga aagagcatca gaatcacggc aaatattatg ttccgaaagt agtctctctt
      181 ggtccatacc attatggtaa cgcgaacctt gaatcggtcc ataacttcaa gcttcttttc
      241 acaaacaagc tcatgaaaga ggacatggac tcaattcagg gtttgtttaa caaacttttt
      301 gaaatggttc atatactacg agggtactat gaagacaaag gtaacctctt ttcagacgac
      361 gagttcatta ggatgatgtt gctcgacggt tgttttatat tgtatttcat taaacatata
      421 tattttccgg ccgaaactgc ttttttgggg atgaaaagcc accaaattat gtttgttcaa
      481 caagatatgt tcttgttaga gaaccaaatt ccatacaaag tacttgttga agtgatgaag
      541 tttgtaccag ccgacgattg ggatttcaag atcagacgga tcatcgatga caatatttta
      601 gcaccagaac gacgtgataa tacgcgtaat catcctcata aaaatttgtt aaccaaagaa
      661 atcccagata acacaaatca tcttcttgag cttttacaaa caaggcttac aaaagtcaaa
      721 acctgcattg caggaaagta tgacaggtat acttttcgta atgtaaacga gcttctagaa
      781 gtaggcattc gttttacgcc aagtaaaatt aggtctttag cgcatatcaa cttcacaaaa
      841 cacggatttt gtgcaaatgt tgaacttcct ccaatcacta tcgacgattc caccaggccg
      901 ttgttgctga atttgatagc atacgaaatg tgttcaaacg acacacaact ttcttgggtg
      961 acgtcataca tttgtcttct tgattctttg attgatcact ctgaggacgt taaaatactt
     1021 cgaaaagcgg ggattcttga taatcgctta ggaagtgatg atgaagttgc gcaattgttt
     1081 aacgaaatag ggacagatct ggtgcctaat aatttggcgt tttcgcttgc gagatctgaa
     1141 attcagaagc attatgagag caaaaggaat acatggatga gccaattgaa gcatgagtat
     1201 attaagactc catgggcatt tgtagctctt ttagttggac ttgtgggtct gtttcttagt
     1261 agtgttcaaa cttactttag tgtttggggt ggcaaaaacc attgtgatag tttttgtcta
     1321 gcattaaaga tgaatcatcg ccattaa
//
LOCUS       XM_071831283            1296 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative UPF0481 protein
            At3g02645 (LOC139841048), mRNA.
ACCESSION   XM_071831283
VERSION     XM_071831283.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1296
                     /gene="LOC139841048"
                     /note="putative UPF0481 protein At3g02645; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139841048"
     CDS             1..1296
                     /gene="LOC139841048"
                     /codon_start=1
                     /product="putative UPF0481 protein At3g02645"
                     /protein_id="XP_071687384.1"
                     /db_xref="GeneID:139841048"
                     /translation="MAEVIRTIEDPHEEWLYSILRPKSPPYSSTMQINKVPIILKEHQ
                     DHAKYYIPKVVSLGPYHYGNTNLEPVQNFKLLFTNKLLKGNTVSILSLFSNLAEMVHT
                     LRGCYEGEANNIFSDDEFTRMMLLDGCFILYFINNIYFPTETVFLGMKSHQIRYVQQD
                     MFLLENQIPYRVLIEVMKFEPAVHWDFKIRRFVDDRILAPELPREKRRHHKDFLSDEI
                     PDNTNHLLELLQTRLTKFKTFVERKTDRSTFRNVTDLQEVGISFVPSRTRSLAHIKFT
                     KYGFCGNLQLPPITVDDCTKAMLLNLIAYEMWFDNTQIPWVTSYICLLDSLIDHSEDV
                     KILRKAGIIDNWLGSDDEVAQMFNEIGTGLVPNSLAFSGTKSEIQMHYKSKRNTWMSQ
                     LNREYIKTPWAFVALLVGLLGLFFSSVQTYFSVWGGQRL"
     misc_feature    97..1212
                     /gene="LOC139841048"
                     /note="Plant protein of unknown function; Region: DUF247;
                     pfam03140"
                     /db_xref="CDD:460823"
ORIGIN      
        1 atggcggagg ttattcgaac cattgaagac ccacatgaag aatggctata ttcgatactg
       61 agacccaagt cgccacctta ttcttctacc atgcaaatta acaaagttcc gataatattg
      121 aaagagcatc aggatcatgc aaagtattat atcccgaaag tagtatctct tggtccgtac
      181 cattacggta acacgaacct tgaaccagtc cagaacttta agcttctttt cactaacaag
      241 cttctgaaag ggaacacggt gtcgattctg agtttgttta gcaatcttgc tgaaatggtt
      301 catacgctac gagggtgtta cgaaggcgaa gctaataata tcttttcaga cgacgagttc
      361 actaggatga tgttgctcga cggttgtttt attttgtact tcattaataa tatatatttt
      421 cctactgaaa ctgttttttt ggggatgaaa agtcaccaga ttaggtatgt tcaacaagat
      481 atgttcttgt tagagaacca aatcccctac agagttctga ttgaagtgat gaagtttgaa
      541 ccagccgtgc attgggattt taaaatcaga cgattcgtcg atgacaggat tttagcacca
      601 gaactaccaa gagaaaaacg acgtcatcat aaagattttt taagtgatga aatcccagat
      661 aacacaaatc atcttctcga gcttttacaa accaggctta caaaattcaa aaccttcgtt
      721 gaaaggaaaa ctgacaggtc tacttttcgt aatgtaaccg atcttcaaga agtagggatt
      781 agtttcgtac caagtagaac taggtcttta gcacatatca agttcacaaa atacggattt
      841 tgtggaaatt tacaacttcc tcccatcact gtcgatgatt gcaccaaggc gatgttgctg
      901 aacttgatag catacgaaat gtggtttgac aacacacaaa ttccttgggt gacttcatac
      961 atttgtcttc ttgattctct aattgatcac tctgaggatg ttaaaatact tcgaaaagca
     1021 gggattattg acaactggct aggaagtgat gatgaagttg cacaaatgtt taacgaaata
     1081 gggacaggcc ttgtgcctaa tagtttagca ttttcaggta caaaatctga aattcagatg
     1141 cattataaga gcaaaaggaa tacatggatg agccaactga atcgtgagta tatcaagact
     1201 ccatgggcat ttgtagctct tttagttgga cttttgggtc tcttttttag tagtgttcaa
     1261 acttacttca gtgtttgggg tggccagaga ttataa
//
LOCUS       XM_071831284            1032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841049), mRNA.
ACCESSION   XM_071831284
VERSION     XM_071831284.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1032
                     /gene="LOC139841049"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 36 Proteins"
                     /db_xref="GeneID:139841049"
     CDS             1..1032
                     /gene="LOC139841049"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687385.1"
                     /db_xref="GeneID:139841049"
                     /translation="MAVFFHDDIVLRILVHLPTRSLVRFQCVSKHWNRLIKYPYIMKF
                     RSPKLFALPIDKSLHLIDAASNSIVNSCCPTEDVCDWGQYERVYAIGAFNGIVVLSLE
                     DIRSLILYNPLTYEYKKLNPPPDNNVRQIPYGYGFGYGATPDDLKIVTLKHDHICQVF
                     SIKKNTSWNILVPYQRNTRFLDKVGTFLNGFLHWINYETDVLHVLNLKNMMFWNRVVP
                     FETRDNTVLGTIDGCLCLLNRRFECNELEMWVMKEYGWAKTFTFEIPRPKDINGLYRF
                     YCKPLSIMDSGQILLGDYYDQLILYDILNKSYRSLNVSLGKKLEDYWRRINCVEYVET
                     LISPSEICV"
     misc_feature    10..120
                     /gene="LOC139841049"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(13..18,22..30,37..42,49..51,82..90,94..96,103..105)
                     /gene="LOC139841049"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(13..15,25..27,34..39,46..51,61..63,67..72,82..90,
                     94..96)
                     /gene="LOC139841049"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    316..873
                     /gene="LOC139841049"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggctgtct tttttcacga tgatattgtt ctcagaatac ttgttcatct tccgacaaga
       61 tccttagtac ggttccaatg cgtatcgaaa cattggaacc gtttgattaa atatccttac
      121 atcatgaagt ttagatcacc caaactcttc gctctgccca tagacaaatc tttacatctc
      181 attgacgccg cgtctaattc catagtcaat agttgttgtc ctactgaaga cgtatgtgat
      241 tggggccaat atgaacgagt ttacgctatt ggagcattca atgggattgt cgttttaagt
      301 ttagaagata ttagaagttt aatcctgtac aacccgttaa catacgagta caagaaactt
      361 aatcctccac cggataataa tgttcgacag atcccatatg gatatggatt cgggtacggt
      421 gcaaccccgg atgacctaaa gattgttacg cttaaacatg atcatatttg tcaagttttt
      481 agtataaaaa agaatacttc gtggaacata ttagtaccat accaaaggaa cactcgtttt
      541 ttagataaag tgggtacgtt tttaaatgga tttctacatt ggatcaacta tgaaaccgac
      601 gtcttacacg tactgaatct taaaaatatg atgttttgga atagagttgt gccatttgag
      661 acaagagaca atactgtttt aggtactata gatggatgtc tttgtttgct taaccggagg
      721 tttgaatgta atgagttgga gatgtgggtt atgaaagaat acggatgggc taaaacattc
      781 accttcgaaa tacctcgtcc aaaagacatt aatggtttat accgcttcta ctgtaaacct
      841 ctttcgataa tggatagcgg acaaattctt ttgggtgatt actatgatca acttatttta
      901 tatgacattc tcaataaatc atatagaagt ttaaacgtgt cgttggggaa gaagttagag
      961 gattattgga gacggattaa ttgcgtggag tatgtggaga ctctgatttc accttcagaa
     1021 atatgtgttt aa
//
LOCUS       XM_071831285            1260 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841050), mRNA.
ACCESSION   XM_071831285
VERSION     XM_071831285.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1260
                     /gene="LOC139841050"
                     /note="uncharacterized LOC139841050; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841050"
     CDS             1..1260
                     /gene="LOC139841050"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687386.1"
                     /db_xref="GeneID:139841050"
                     /translation="MADVGSSMGLDVKACDEAKSKIMHFDLLRVKSLWGNYRFDFSCI
                     LGSWNHHDGVYYMINVYTPQDAAPKASLWLVIFDFVLNHMGYFMIFGDFNVVRFEVER
                     SGSEFLLSVENDFNSFIDNANLVDVPLGGRAFTWMSTPGSKLSKLDRFLLSDDCVDVL
                     HDVHVMVLDTGCFDHNLLLLHIQKLDYGHYLLDSFHPGYFVMVLMRRSSEVSCLQEIY
                     LLLSSLELRIDYGTDSNEDKSNRAALLLEMQSLENLHDLYIMQKARDKWIKDGDDNTK
                     YFHDVLKFKRRTQSVNDDSYPHLTDATSLTDSDRAFFGECLSMHEVKVAMWDCGGDKT
                     PGSDGYPFFFFKHYWDLVKDDVYNLVNIKDFRPISLIGSFYKIVAKILVNRLCSVIHR
                     VISCEQSAFIRGRQILNGPLMLSEIID"
     misc_feature    <172..546
                     /gene="LOC139841050"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(181..183,280..282,523..525)
                     /gene="LOC139841050"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    1081..>1257
                     /gene="LOC139841050"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggcggatg ttggatcaag tatgggattg gatgtcaagg cttgtgatga ggctaaatca
       61 aagataatgc attttgatct gttgcgtgtt aagtccttat ggggaaatta tcgatttgat
      121 ttttcatgca tcctagggtc atggaatcat catgatgggg tttattatat gattaatgtg
      181 tacacacctc aagatgcagc tcctaaggct tctctttggc tcgttatttt tgattttgtt
      241 cttaatcaca tgggctattt catgatcttc ggtgatttta atgttgttag attcgaggtg
      301 gaaagatctg gatcggaatt tttgttgtca gtagagaatg acttcaactc ttttattgat
      361 aatgccaatt tagtagatgt accactaggt ggtcgtgctt tcacttggat gagtacacct
      421 ggttctaaat taagtaaact tgatcgtttc cttctctcag atgattgtgt cgatgttctt
      481 catgatgtac atgtaatggt acttgatacg ggatgttttg atcataatct attacttctc
      541 catatccaaa agttggacta tggccattac cttttagatt ctttccatcc tggctacttc
      601 gtaatggtat tgatgagaag gtcttctgaa gtgtcatgcc tacaagaaat ttacctcctt
      661 ttatcttctt tggagcttcg aattgattat ggtacggatt caaacgagga taaatcaaat
      721 cgtgcagctc tcctattaga aatgcagtct cttgaaaatc tgcacgacct ctatatcatg
      781 caaaaagcac gtgataaatg gattaaagat ggtgacgata acaccaaata cttccatgat
      841 gttctgaaat tcaaacgtcg tactcaatca gtaaatgacg atagttatcc acacctcacg
      901 gatgctacga gtcttactga ttctgatcga gctttttttg gagagtgtct ttcgatgcat
      961 gaggttaaag ttgctatgtg ggattgtggt ggggataaga caccaggttc ggatggttat
     1021 cctttcttct tcttcaaaca ttattgggat cttgtaaagg atgatgtgta taatctggtt
     1081 aatattaaag actttcgccc tatctctttg attggttcat tctacaaaat tgtggccaag
     1141 attcttgtaa atcgactttg ttctgttata catcgggtta tcagttgtga gcaatctgct
     1201 tttattagag gtcgtcaaat tcttaatggt ccacttatgc ttagtgaaat cattgactag
//
LOCUS       XM_071831286             486 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841053), mRNA.
ACCESSION   XM_071831286
VERSION     XM_071831286.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..486
                     /gene="LOC139841053"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139841053"
     CDS             1..486
                     /gene="LOC139841053"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687387.1"
                     /db_xref="GeneID:139841053"
                     /translation="MEIVGHDYNLPYNTRLGTLPGVLYDGALHWFLYDTKKKIVILSF
                     DLSLEEFKEIPLPDDTKYVCDDYDILEMFEECLCIYGSYDYDIRVMRNYGRWQLLPHD
                     DEGYKYVVAAITCTLHRFPDNTWRFCDYDHGKEDVFKQSWFNSSFPVLVKSLVSPYLH
                     E"
     misc_feature    <61..>282
                     /gene="LOC139841053"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggaaatcg ttggacacga ttacaattta ccttataata ctcgactagg aactcttcct
       61 ggtgttttat acgatggggc gcttcattgg tttctgtatg atacgaagaa gaagatagtt
      121 attctttcgt ttgatttatc tttagaggaa tttaaagaaa tccccctacc tgatgacaca
      181 aaatatgtat gtgatgatta cgacatactg gagatgtttg aagaatgttt atgcatatat
      241 ggttcctatg attacgacat acgggtgatg agaaactatg gtcgttggca actgctccca
      301 catgatgacg aaggttataa gtatgttgta gccgctatta catgcacact ccatcgcttt
      361 ccagacaaca cttggcgttt ttgtgattac gatcatggaa aagaagatgt gtttaagcag
      421 agttggttta attcttcttt tcctgtatta gtcaagtccc ttgtatctcc ttatctccat
      481 gagtaa
//
LOCUS       XM_071831287            1524 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycosyltransferase-like
            At2g41451 (LOC139841054), mRNA.
ACCESSION   XM_071831287
VERSION     XM_071831287.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1524
                     /gene="LOC139841054"
                     /note="glycosyltransferase-like At2g41451; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139841054"
     CDS             1..1524
                     /gene="LOC139841054"
                     /codon_start=1
                     /product="glycosyltransferase-like At2g41451"
                     /protein_id="XP_071687388.1"
                     /db_xref="GeneID:139841054"
                     /translation="MAGLYSSIKLSPSSSSLSQSSQVFTPRILFLLSLLLSLTAFAFI
                     VQWHGKIGDPLYRWPSLNRLEIMGMNTTTTHTSSNCMETLGQSQSIFFPYFRKWNFSY
                     KSDVKPKICITSSTSAGLEQILPWILYHKVIGVTNFILFVEEKAASSGVSKVIESIPE
                     VKLVHRTKELEDEQAKSRMWNETYMARYFNKPCNYELFVKQYLNTEMAIVMAREAGME
                     WIIHLDTDELIHPAGTRGYSLTQLLSDVPENVDMVVFPNYESCVERDDVNEPFTEVSM
                     FKKNYDHLTEESYTRNYKESVRGNPGYFLTYSNGKSAARIQPHLRPNGAHRWYNYMKQ
                     PNEITFDEAAILHYTYAKFSDLTSRRDRCGCKPTIEGVTKCFFLDFDRAAFIIASSVT
                     EEDMLNWYREHVVWMDKDLNNKLLKEGILTRKYAPMVILQELKESGVYSSLIESVQAS
                     LSKDEFMSSNEIQVSNSSRRIGTEESGIYVRNNLRADNIDLVAMPPLPAPVIDFIKS"
ORIGIN      
        1 atggcgggtc tttattcgtc aatcaaactt agtccatctt catcatcatt atctcaatct
       61 tctcaagttt tcactccaag aatcttattt ttgctatctc ttcttctctc gctaacagca
      121 tttgcattca tcgttcaatg gcatggcaaa attggtgacc cgttatacag atggccgtct
      181 ttaaaccgcc ttgaaattat gggtatgaat accaccacca cgcacacatc ttcgaattgc
      241 atggagactt tgggacaaag ccagtctata ttctttcctt atttcagaaa atggaatttt
      301 agttacaaat ctgatgttaa acctaagata tgcattactt caagcacttc agctgggtta
      361 gagcaaatac taccatggat tttatatcat aaagttattg gtgttacaaa tttcattttg
      421 tttgtggaag aaaaagccgc aagctcgggc gtatccaaag ttatagaatc cattcctgag
      481 gtgaaacttg tacatagaac gaaagaactc gaggatgaac aagcaaagag ccggatgtgg
      541 aatgagactt atatggcaag atacttcaac aaaccgtgca actatgaatt atttgtcaag
      601 cagtatctta atacggaaat ggctattgtt atggccaggg aagctggtat ggagtggata
      661 attcatctgg atacagacga attaattcat cccgctggta ctcgtggata ctctcttaca
      721 cagcttttat cagacgttcc tgaaaatgtt gatatggttg tgtttccaaa ctatgagagc
      781 tgtgttgaac gagacgacgt aaacgaacct ttcactgagg tctcaatgtt taaaaaaaat
      841 tatgaccatc ttacggaaga atcgtacact aggaattaca aagaatcggt tcgtggtaat
      901 ccaggatact ttttgacata ttcaaatggg aagtcggctg ctcgtatcca accacattta
      961 cgtcctaatg gtgcacatag gtggtataac tatatgaagc aaccaaacga aataacattt
     1021 gacgaggctg caattcttca ttacacatat gccaagtttt cggatttgac atcaaggcgt
     1081 gatcgatgtg gctgcaagcc tacaatagaa ggggttacaa aatgcttctt tttggatttt
     1141 gatagagctg cttttataat agcatcaagc gtaacagagg aggatatgct aaactggtac
     1201 cgcgaacatg ttgtgtggat ggacaaggat ctaaataata aacttctaaa agaaggaatt
     1261 ttaacccgca aatatgctcc tatggtgatt ttgcaagaat taaaggagtc tggtgtttac
     1321 agttctctga ttgagtccgt acaggcaagt ctatctaagg acgaattcat gtcatcaaat
     1381 gaaatacaag ttagtaattc ttccaggaga attggtacag aagaatccgg tatatatgtt
     1441 aggaataatt tacgagcgga taatattgat ttagtagcaa tgccaccact ccctgctccg
     1501 gtaattgatt ttataaaaag ttag
//
LOCUS       XM_071831288            1524 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glycosyltransferase-like
            At2g41451 (LOC139841055), mRNA.
ACCESSION   XM_071831288
VERSION     XM_071831288.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1524
                     /gene="LOC139841055"
                     /note="glycosyltransferase-like At2g41451; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139841055"
     CDS             1..1524
                     /gene="LOC139841055"
                     /codon_start=1
                     /product="glycosyltransferase-like At2g41451"
                     /protein_id="XP_071687389.1"
                     /db_xref="GeneID:139841055"
                     /translation="MAGLYSSIKLSPSSSSLSQSSQVFTPRILFLLSLLLSLTAFAFI
                     VQRHGKIGDQLYRWPSLNRLEYMGMNTTTTHTSSNCIETLGQSQSISFPYFREWNFSY
                     KSDVKPKICITSSTSAGLEQILPWIFYHKVIGATSFILFVEGKAATASVSKVIESIPE
                     VKLVHRTKELEEEQEKSRMWNETYMARYFYKPCNYELFVKQYLNTEMAIVMAREASME
                     WIIHLDTDELIHPAGTRGYSLTQLLSDVPENVDMVVFPNYESCVERDDIKEPFTEVSM
                     FKKNYDHLTEESYSRNYKESVRGNPGYFLTYSNGKSAARIQPHLRPNGAHRWYNYMKQ
                     PNQITLDEAAILHYTYAKFSDLTSRRDRCGCKPTIEGVTKFFFLDFDRAAFIIASSVT
                     EEDMLNWYREHVVWMDKDLNNKLLKEGILTRIYAPMVILQDLKESGVYSSLIESVQAS
                     LSKDAFMSLNEIQVSKSSRRIGTEESGISVRNNLRADNIDLVAMPPLPAPVIDFIKS"
ORIGIN      
        1 atggcgggtc tttattcgtc tatcaaactt agtccatctt catcatcatt atctcaatct
       61 tctcaagttt tcactccaag aatcttattt ttgctatctc ttcttctctc gctaacagca
      121 ttcgcattca tcgttcaacg gcatggcaaa attggtgacc agttatacag atggccgtct
      181 ttaaaccgcc ttgaatatat gggtatgaat accaccacca cacacacatc ttccaattgc
      241 atcgagactt tgggacaaag ccagtctata tcctttcctt atttcagaga atggaatttc
      301 agttacaaat ctgatgttaa acctaagata tgcattactt caagcacttc agccgggtta
      361 gagcaaatac taccatggat tttctatcat aaagttattg gtgctacaag tttcattctg
      421 tttgtggaag gaaaagccgc aaccgcaagt gtatctaaag ttatagaatc cattcctgag
      481 gtgaaacttg tacataggac gaaagaactc gaggaagaac aagaaaagag ccggatgtgg
      541 aatgagactt atatggcaag atacttctac aaaccgtgca attatgaatt atttgtcaag
      601 cagtatctta atacggaaat ggctattgtt atggccaggg aagctagtat ggagtggatt
      661 attcatctcg atacagacga gttaattcat cctgctggca ctcgaggata ctctcttaca
      721 cagcttttat cagacgttcc tgaaaatgtt gatatggttg tgtttccaaa ctatgagagc
      781 tgtgttgaac gagacgacat aaaggaacct ttcactgagg tctcaatgtt taaaaagaat
      841 tatgaccatc ttacggaaga atcgtactct aggaattaca aagaatcagt tcgtggtaat
      901 ccgggatact ttttgacata ttcaaatggg aagtcggctg ctcgtatcca accacattta
      961 cgtcctaatg gtgcacatag gtggtataac tatatgaagc aaccaaacca aataacatta
     1021 gacgaggctg caattctaca ttacacctat gcaaagtttt cggatttgac atcaaggcgt
     1081 gatcgatgtg gctgcaagcc tacaatagaa ggtgttacaa aattcttctt tttggatttt
     1141 gatagagctg cttttataat agcatcaagt gtaacagagg aggatatgct aaactggtac
     1201 cgcgaacatg ttgtgtggat ggacaaagat ctaaataata aacttttaaa agaaggaatc
     1261 ttaacccgca tatatgctcc tatggtgatt ttgcaagatt tgaaggagtc tggtgtctac
     1321 agttctctga ttgagtccgt ccaggcaagt ctatctaagg acgcattcat gtcattaaat
     1381 gaaatacaag ttagtaaatc atccaggaga attggtacag aagaatcggg tatttctgtt
     1441 aggaataatt tacgagcgga taatattgat ttagtagcaa tgccaccact ccctgctccg
     1501 gtaattgatt ttataaaaag ttag
//
LOCUS       XM_071831289            2352 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841056), mRNA.
ACCESSION   XM_071831289
VERSION     XM_071831289.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2352
                     /gene="LOC139841056"
                     /note="uncharacterized LOC139841056; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841056"
     CDS             1..2352
                     /gene="LOC139841056"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687390.1"
                     /db_xref="GeneID:139841056"
                     /translation="MSRLELYRLKSMWGNFHFDYALSMARGFSGGLISLWDPNAFVKE
                     NMWCDNNFVIVKGRWIREDIVVFMGNIYAPQSIQDKLALWNKLTDFMANNVGEYIIFG
                     DWNVVRVASERSGTDLSGPHHITVKLRALKVKLREWITQSRKEEKAQLTELVDNINEL
                     DCLIDSGLASNNQIDERNSLFQKKEDINKFATLDSLQKARIKWDIEGDENSNHKFDAV
                     NSGVQFNIANPLVTLSPEDNLFLEREFDDVEIKLAVWDCPLCATIFLLFFASGSMPNG
                     ANSALFTMIPKVKNPTLVTDFRPISLIGRQILDSQLMLSEIIKWHEKNNRKMLLFKVD
                     FEKAFDLSARTSVLVNGSPTREFPIKRDLRQGDPLSPFLFMIVMEGLHLALNKAKESN
                     FIRGICFGSNALCLSHFIYADDVIIMSEWRTRELGNIIQLLNVFYLVSGLKINVAKSH
                     VYGIGVSPQIVNMVAGYFGCSVGSFPTTYLGIPIGSNMKLVSSWDDLIGKFNNRLASW
                     KARLLSSGGRLTLIKSVLGSVGIYFMSLFVFPVTVINKIEAIIMRFFWGSNNSKRKMA
                     WVKWDNALASYEKGGLNICSLKAFNLALILKWRGRYFNSTNDMWVKVIKAIHGDCFEK
                     VNGSSPWANIVSTCCKLTTDNIIPQNLFYWHVGNGQKNAFWSDPWCGLVLLRDRFNRL
                     YHIDVNKEDKVADKRVNDSWNWSWARENIGSRNLAALDLLTCEFESMLFSDREDYWKC
                     SLDGDGSYTVKNSRNHIDKVTLPSHPIETSWLKTLPKKVNVFL"
     misc_feature    <94..>321
                     /gene="LOC139841056"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    847..1452
                     /gene="LOC139841056"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1000..1017,1093..1098,1231..1233,1237..1242,
                     1438..1443)
                     /gene="LOC139841056"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1000..1017,1093..1095,1237..1239)
                     /gene="LOC139841056"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1096..1098
                     /gene="LOC139841056"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgtctagat tagaattgta tcgtttaaag tcgatgtggg gtaattttca ttttgattac
       61 gctttatcca tggctcgggg tttttcagga ggtttaatct ccttgtggga cccaaacgct
      121 tttgttaagg aaaatatgtg gtgcgataac aactttgtta tagttaaagg tcgatggatt
      181 agggaagata ttgttgtttt catgggtaat atatacgccc ctcaaagcat tcaagataaa
      241 cttgccttat ggaataagtt aacggatttt atggccaaca atgttggtga gtacataata
      301 ttcggagatt ggaatgtggt tcgggttgct agtgaaagaa gtggcacaga tttatccggg
      361 ccccatcata tcactgttaa attaagagcg ctcaaagtga aacttaggga atggattacg
      421 caatctagga aggaagaaaa agctcagtta acagagttag ttgataatat taatgagttg
      481 gattgtttaa ttgattcggg cctggcttca aacaatcaaa ttgatgagcg taacagtttg
      541 tttcaaaaga aggaagatat taacaaattt gctactcttg attctttaca aaaagctcgt
      601 attaagtggg atattgaagg tgatgagaac tctaatcaca agtttgatgc ggtgaattct
      661 ggtgttcaat tcaacattgc taatccgtta gtcacactta gcccagaaga caatttgttc
      721 cttgaaagag agttcgatga cgtcgagatt aagttggcgg tttgggattg tccgttatgt
      781 gcaacgatat tcttgctttt ttttgcctcg gggtcgatgc ctaatggggc aaactcagct
      841 ctctttacta tgattccaaa agtcaaaaac ccgactcttg taacggactt taggcctatt
      901 tctctaatag gaaggcaaat ccttgatagc caactgatgt taagtgagat aattaaatgg
      961 cacgagaaaa acaatcgtaa gatgctgctc ttcaaagtcg attttgagaa agctttcgat
     1021 ttgtctgcta gaacttcggt tcttgtaaac gggagcccta ctcgtgaatt tcccattaaa
     1081 agagatcttc gtcaaggaga tcctcttagc ccttttttgt tcatgatcgt aatggagggc
     1141 cttcatttgg ctcttaataa agccaaagaa tctaatttca ttcgtggcat ttgttttgga
     1201 tcaaatgcgt tatgcttgtc tcactttatt tatgctgacg atgtcatcat tatgtcggaa
     1261 tggaggacgc gcgaattagg taacattatc caacttctta atgttttcta tttggtttcg
     1321 ggccttaaaa taaatgttgc taagtcccat gtttatggca ttggcgtttc tcctcaaatc
     1381 gttaacatgg tggctgggta ttttggttgt agcgtgggct cttttccaac cacatatctt
     1441 ggtattccga ttggatctaa tatgaaactt gtttcgagtt gggatgatct tattggtaaa
     1501 tttaataatc gtcttgcttc atggaaagcg cgtctattat cgtcgggtgg tagactcact
     1561 cttattaaat cggttttggg gagcgtggga atttacttta tgtctctttt cgttttcccg
     1621 gttacggtta ttaataagat tgaagcaatc ataatgagat ttttttgggg ttccaacaac
     1681 tctaaacgaa aaatggcgtg ggtaaaatgg gataatgcac ttgcttctta cgaaaaaggt
     1741 ggacttaata tttgtagctt aaaagctttt aatcttgctt taatccttaa gtggagaggg
     1801 cgctacttta attctacgaa tgacatgtgg gttaaagtta ttaaagctat tcatggagat
     1861 tgttttgaaa aggtgaacgg aagtagtcca tgggctaata tagtgtcgac atgttgtaaa
     1921 cttactactg ataatattat tcctcaaaac cttttttact ggcacgttgg taacggccaa
     1981 aaaaatgcat tttggtccga cccctggtgt ggtcttgttc tgcttcgaga tcgatttaat
     2041 agattatatc atattgatgt gaataaagaa gataaagttg ctgataaacg ggttaatgat
     2101 tcttggaatt ggtcttgggc tcgtgagaac atagggtcaa gaaaccttgc cgcgcttgac
     2161 ttactcacat gtgaattcga aagtatgcta ttttcggata gagaagatta ttggaaatgc
     2221 tctcttgatg gagatggcag ttacacggtt aaaaattcac ggaatcatat tgataaagtt
     2281 actcttcctt ctcatccaat agagacttca tggttaaaaa cattaccgaa gaaggttaac
     2341 gtttttttgt ga
//
LOCUS       XM_071831290             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841057), mRNA.
ACCESSION   XM_071831290
VERSION     XM_071831290.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139841057"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841057"
     CDS             1..783
                     /gene="LOC139841057"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687391.1"
                     /db_xref="GeneID:139841057"
                     /translation="MMIGSCNGLVCISPFVDELLVTNPSTREVRKLPMLPFCRGNLCW
                     GFGYDSITDDYKVVAGINESEHLMRFQVLSLKSSQWKFVGDGNYLTYNAQGCFPRPGV
                     LHDGALHWFMYDTKKKKKKKKKKMVILSFDLSLEKFKEIPQPDDTIYLCDHLNVLGTF
                     QKYLCVFRTYDILTDHCNTWLMKNYNCWQLIPCDDYEGNKYGAAATVYILDFIPENTW
                     HLCDDDDKGYVDMLWQRWYHIGTPIFVKSLASLGNKRKRKLR"
     misc_feature    7..>555
                     /gene="LOC139841057"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgatgattg gttcctgtaa tggccttgtt tgcatctctc cttttgtaga tgaattatta
       61 gtaactaatc cctccactcg tgaggttaga aaactgccaa tgcttccttt ttgtagggga
      121 aatttatgtt ggggttttgg ttatgattct atcaccgatg attacaaggt tgttgccggc
      181 atcaatgaat ctgagcatct tatgcgcttt caagtgttat ctttaaaatc aagtcaatgg
      241 aaattcgttg gagatggcaa ctatttaact tataatgctc aaggttgttt tcctcgtcct
      301 ggtgttttac atgatggggc gcttcattgg tttatgtatg atacaaagaa gaagaagaag
      361 aagaagaaga agaagatggt tattctttct tttgatttat ctcttgagaa attcaaagag
      421 atcccccaac ctgatgatac aatatattta tgtgatcatc ttaacgtact agggacgttt
      481 caaaaatatc tgtgcgtatt ccgtacctat gatattctta ctgatcactg caacacatgg
      541 ttgatgaaaa actacaattg ttggcaactg atcccatgtg atgattacga aggtaacaag
      601 tatggtgctg ccgctactgt atacatactc gatttcattc cagaaaacac ttggcattta
      661 tgtgatgatg atgataaagg atatgtagat atgctatggc agagatggta tcatattggt
      721 acccctatat ttgtcaagtc acttgcatct ctgggaaaca aaagaaaaag aaaattaaga
      781 tga
//
LOCUS       XM_071831291             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841058), mRNA.
ACCESSION   XM_071831291
VERSION     XM_071831291.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139841058"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841058"
     CDS             1..780
                     /gene="LOC139841058"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687392.1"
                     /db_xref="GeneID:139841058"
                     /translation="MMIGSCNGLVCISPFVDELLVTNPSTREVRKLPMLPFCRGNLCW
                     GFGYDSITDDYKVVAGINESEHLMRFQVLSLKSSQWKFVGDGNYLTYNAQGCFPRPGV
                     LHDGALHWFMYDTKKKKKKKKKMVILSFDLSLEKFKEIPQPDDTIYLCDHLNVLGTFQ
                     KYLCVFRTYDILTDHCNTWLMKNYNCWQLIPCDDYEGNKYGAAATVYILDFIPENTWH
                     LCDDDDKGYVDMLWQRWYHIGTPIFVKSLASLGNKRKRKLR"
     misc_feature    7..>552
                     /gene="LOC139841058"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgatgattg gttcctgtaa tggccttgtt tgcatctctc cttttgtaga tgaattatta
       61 gtaactaatc cctccactcg tgaggttaga aaactgccaa tgcttccttt ttgtagggga
      121 aatttatgtt ggggttttgg ttatgattct atcaccgatg attacaaggt tgttgccggc
      181 atcaatgaat ctgagcatct tatgcgcttt caagtgttat ctttaaaatc aagtcaatgg
      241 aaattcgttg gagatggcaa ctatttaact tataatgctc aaggttgttt tcctcgtcct
      301 ggtgttttac atgatggggc gcttcattgg tttatgtatg atacaaagaa gaagaagaag
      361 aagaagaaga agatggttat tctttctttt gatttatctc ttgagaaatt caaagagatc
      421 ccccaacctg atgatacaat atatttatgt gatcatctta acgtactagg gacgtttcaa
      481 aaatatctgt gcgtattccg tacctatgat attcttactg atcactgcaa cacatggttg
      541 atgaaaaact acaattgttg gcaactgatc ccatgtgatg attacgaagg taacaagtat
      601 ggtgctgccg ctactgtata catactcgat ttcattccag aaaacacttg gcatttatgt
      661 gatgatgatg ataaaggata tgtagatatg ctatggcaga gatggtatca tattggtacc
      721 cctatatttg tcaagtcact tgcatctctg ggaaacaaaa gaaaaagaaa attaagatga
//
LOCUS       XM_071831292             705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841059), mRNA.
ACCESSION   XM_071831292
VERSION     XM_071831292.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..705
                     /gene="LOC139841059"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841059"
     CDS             1..705
                     /gene="LOC139841059"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687393.1"
                     /db_xref="GeneID:139841059"
                     /translation="MTFRKKIWGFGYDSTTDDYKVVVGFNEDSNSMLHMIFLVLSLKS
                     NKWKVVRDGPNYLTYEAHGHIRDLPGVLFDGALHWLVDDTNEEKKVILSFDLSLEECK
                     EIPQPDDDSYSCDDRTILRMFDQCLCISGFYDIHSNNDNNCGIWVMKNYNSSQLVLPS
                     DDYRCKKYGADATTAYPLDIFPDNTWRFNNDDDDDNLSWRSWFDTLFPRLSISDVGVD
                     NGFDLLSLSLSNLVKV"
     misc_feature    16..>453
                     /gene="LOC139841059"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgaccttca ggaaaaaaat ttggggtttt ggttatgatt ctaccaccga tgattacaag
       61 gttgttgtcg gctttaatga agattccaat tccatgcttc atatgatctt tctagtgtta
      121 tctttaaaat caaataaatg gaaggtcgtt agagacggcc ccaattattt aacttatgaa
      181 gctcatggcc atattcgcga tcttcctggt gttttatttg atggggcgct tcattggctt
      241 gtggatgata caaacgagga gaagaaagtt attctttcgt ttgatttatc tttagaggaa
      301 tgtaaagaaa tcccccaacc tgatgatgat agttattcat gtgatgatcg aaccatacta
      361 agaatgtttg atcaatgtct atgcatatct ggtttctatg atattcattc aaataatgat
      421 aataactgcg ggatatgggt gatgaaaaat tacaattctt cgcaactggt gcttccaagt
      481 gatgattacc ggtgtaaaaa gtatggtgct gatgccacga ctgcataccc actggatatc
      541 tttccagaca acacttggcg ttttaataat gatgatgatg atgataatct gtcatggcgg
      601 agttggtttg atacactttt tccacgacta tctataagtg atgtaggtgt agataatggt
      661 ttcgacttgt taagcttgtc gcttagtaat cttgtaaaag tctaa
//
LOCUS       XM_071831293             999 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein CPR1-like
            (LOC139841060), mRNA.
ACCESSION   XM_071831293
VERSION     XM_071831293.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..999
                     /gene="LOC139841060"
                     /note="F-box protein CPR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     Proteins"
                     /db_xref="GeneID:139841060"
     CDS             1..999
                     /gene="LOC139841060"
                     /codon_start=1
                     /product="F-box protein CPR1-like"
                     /protein_id="XP_071687394.1"
                     /db_xref="GeneID:139841060"
                     /translation="MDVIEEILERLDPEDLLRCKSVCKSWYNLISSDSFVKAHLKRSY
                     ISNREHRFFRIHIDWNSSYITENNNKLWRNFMMVGSCDGLVCISRFEEELLVANPSTR
                     EVIKLPKVPYSNWRCWGFGYDSLTDDFKVVVGFNESKHHMRFQLLSLKSNQWKFAGEG
                     DCLSYRTCSFYPYRPYPYPGVLYDGALHWFMYDTKKKKKKKKKKKIVILSFDISLEEF
                     KEIPQPDDDSYSCDDRTRLEIFDECLCIYNSYDIHTNHRQIWVMKNYNCWQLIPSDYA
                     REKFDDITGLALHINRDNTLHLYVDPRYGKFSFHIVFPIFVKSLVSPKIKKKYQYE"
     misc_feature    4..105
                     /gene="LOC139841060"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(7..9,16..21,28..33,43..45,49..54,64..72,76..78)
                     /gene="LOC139841060"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    232..>795
                     /gene="LOC139841060"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtaa ttgaagagat tcttgaaaga ttggatccag aagatcttct ccgatgcaag
       61 agcgtttgta agtcatggta taatttgata tcatctgatt cttttgttaa agctcatctt
      121 aaacgtagtt acattagcaa tcgtgaacat cgatttttta gaattcatat agattggaat
      181 agctcttata ttactgaaaa taataataaa ttatggcgta attttatgat ggttggttcc
      241 tgtgatggcc ttgtttgcat ctctcgtttt gaagaagaat tattagtagc taatccctcc
      301 actcgagagg ttataaagct gccaaaggtt ccgtacagta attggagatg ttggggattt
      361 ggttatgatt ctttaaccga tgattttaag gttgttgtcg ggtttaatga gtccaaacat
      421 catatgcgct ttcaattgtt atctttaaaa tcaaatcaat ggaaattcgc tggagaaggc
      481 gattgtttaa gttatagaac atgttctttt tatccttatc gtccttatcc ttatcctggt
      541 gttttatacg atggggcgct tcattggttt atgtatgata ctaagaagaa gaagaagaag
      601 aagaaaaaga agaagatagt tattctatct tttgatatat ctctggagga atttaaagaa
      661 atcccccaac ctgatgatga cagttattca tgtgatgatc gaaccagatt agagatattt
      721 gatgaatgtc tttgcatata taattcatat gatattcata ctaatcaccg ccagatatgg
      781 gtgatgaaaa actacaattg ttggcaactg atcccaagtg attacgcacg tgaaaaattt
      841 gatgacatta ctggattggc actccatatc aatcgagaca acactttgca tttatatgtt
      901 gatcctcggt atggcaagtt tagttttcat attgtttttc ctatatttgt caagtccctt
      961 gtatctccaa agataaaaaa aaaatatcaa tacgagtag
//
LOCUS       XM_071831294            1041 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841061), mRNA.
ACCESSION   XM_071831294
VERSION     XM_071831294.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1041
                     /gene="LOC139841061"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139841061"
     CDS             1..1041
                     /gene="LOC139841061"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687395.1"
                     /db_xref="GeneID:139841061"
                     /translation="MDVLEEVFARLDVRDVISMDVVEEVLARLDVRDVLRYKSVCKSW
                     YNLISSIYFVKAHLKHSYNSNRQYGYLRIRLDANFSKIPHDYEWCSFKTVGSFNGLVC
                     ICSNNGLFLVINPSTREVRNLPMMAYNDRRKLCWGFGYDSSTDDYKVVVGFNGSKHHI
                     RFQVFSLKSTKWKIIGDDYYYLTYNTKTNDPICGFLHAGALHWFMYDTKKNKRVIFSF
                     DLSLEKLKEIPQPDDPEYVCDNQNILGTFEERLCIFHDVHANPRQTWVMEMYDSWQLL
                     PHDYEGHADYSKDYTIGALVFVKSLVSPYPCGKPNNKKNSKRNRRKNKACFNYRLSLK
                     FYLMLYVILLDE"
     misc_feature    58..159
                     /gene="LOC139841061"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(61..63,70..75,82..87,97..99,103..108,118..126,
                     130..132)
                     /gene="LOC139841061"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    280..>804
                     /gene="LOC139841061"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtgc ttgaggaggt atttgcaaga ttggatgtac gagatgtcat ttcaatggat
       61 gtggttgagg aggtacttgc aagattggat gtacgagatg ttctccgata caagagtgtt
      121 tgtaagtcat ggtataattt aatatcatct atttattttg ttaaagctca tcttaaacat
      181 agttacaata gcaatcgtca atatggatat ttaagaatcc gattagatgc gaatttcagt
      241 aagatacctc atgattatga atggtgtagt tttaagacgg ttggttcctt taatggcctt
      301 gtttgcatct gctctaataa tggtttgttt ttagtaatta atccttccac tcgagaggtt
      361 agaaacctgc caatgatggc ttacaatgac aggagaaaat tatgttgggg tttcggttat
      421 gattcttcaa ccgatgatta caaggttgtt gtcggcttta atggatccaa gcatcatata
      481 cgttttcaag tgttttcttt aaaatcaacc aaatggaaaa tcattggaga cgattattat
      541 tatttaactt ataatactaa aactaatgat cctatttgtg gttttttaca cgccggggcg
      601 cttcattggt ttatgtatga tacgaagaag aataagagag ttattttttc gtttgattta
      661 tctctagaga aattaaaaga aatcccccaa cccgatgacc cggaatatgt atgtgataat
      721 caaaacatac tagggacgtt tgaagaacgt ctatgcatat tccatgatgt tcatgctaat
      781 ccccgacaaa catgggtgat ggaaatgtac gacagttggc aactgctccc acatgattac
      841 gaaggacatg ccgattattc taaagattat actattggtg cccttgtatt tgtcaagtca
      901 cttgtatctc catatccctg tgggaaacca aataataaga agaatagcaa gagaaatagg
      961 aggaagaata aggcatgttt taactacagg ctgtcactta agttttatct tatgttatat
     1021 gttatactat tagacgaata g
//
LOCUS       XM_071831295            2298 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841062), mRNA.
ACCESSION   XM_071831295
VERSION     XM_071831295.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2298
                     /gene="LOC139841062"
                     /note="uncharacterized LOC139841062; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841062"
     CDS             1..2298
                     /gene="LOC139841062"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687396.1"
                     /db_xref="GeneID:139841062"
                     /translation="MSYADSSQTQSSQISELTSQLAKLIQSNMESQAHRLPDSLKINL
                     NLNNTNFSLWSRMMKVAIGGKSDALLNHLTNDPPAITDNKWNQKDLVVFSWIIQNIEP
                     QIASNLTQFPTTKTLWNALITTYSSGKDKLQTFDLHVRANNIRQEGKSLEELWLNMQG
                     IWGEIKMRDPNPMECHNDIVKYNNLRSEQKLFQFLNALDHKHDNIKREILRLDPLPVE
                     SAYAAIQKEIAHRTIFGTKTETPNHSDIGTGLVTSRTKEHEGTNLISRNQRRSDHSQS
                     SSQDKDKLVCSECGMKRHTREQCFRVIGFSEWWNDGHKKGKVAMVTATAATGCNPEAS
                     NSGTTTTGGFGLLAVEQPSSGGDTTTFDKTDICFQSKPNKDKIKTENGGVIQVKGGGM
                     DIRTGEIIGRGTERDGLYYVDEFTRDGTIMLAHGTPDRIILLSVKLVSWQKAIKTLFK
                     PSNTKIEHPFALVHSDVWGPARVNGETEYFYGTKHTSQGETEPNDSVSCLDVPSSVEV
                     AHSTKPHSTSSVSTTNENLPHTEVSAESLETNTSDLENEDVLAQENLTGQHESESKTE
                     PEPEQPSEPEHSSEPEQLSESEPSPETEQPSEPEQQTEQQYILPPRINRGVPPKRFSP
                     EKEPCRSRYPVANIANGNLSPEAKQFTSALYSENIPNSVEQALKSPNWRKAMEEEMRA
                     LQENKTWEKCSLPKSKKPVGYRWVFIIKHKAGGTIERYNARLVAKGYTQTYGIDYSET
                     FSPVAKIDTIRVLFSVAANKDWPLH"
     misc_feature    <1543..2112
                     /gene="LOC139841062"
                     /note="Neuroendocrine-specific golgi protein P55 (NESP55);
                     Region: NESP55; pfam06390"
                     /db_xref="CDD:115071"
     misc_feature    2056..>2295
                     /gene="LOC139841062"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgtcatatg ctgacagcag ccaaactcaa agcagccaaa tcagtgaact aacgagccaa
       61 ttggcaaagt taattcaatc caacatggaa tcacaagcac acaggcttcc agattcctta
      121 aaaatcaatt tgaacctcaa caacacaaat ttctctttgt ggtcaaggat gatgaaggtt
      181 gcaattggag gcaagtccga tgccttactc aatcatctta caaatgatcc accagcaatc
      241 acagataaca aatggaacca aaaagacctg gtcgtgtttt cttggattat tcagaatata
      301 gagccacaaa ttgcaagcaa cttgactcaa tttccaacaa caaaaacctt gtggaatgca
      361 ctcatcacaa catacagttc aggcaaggac aagctgcaaa ctttcgacct acatgtcagg
      421 gcaaacaaca tcagacaaga aggtaagtcg ttagaagaat tatggttgaa tatgcaaggg
      481 atttggggag aaatcaaaat gagagatcca aaccctatgg aatgccataa tgatattgtc
      541 aaatacaata atcttagatc agagcaaaaa ctatttcaat ttttgaatgc tcttgatcac
      601 aaacacgaca atatcaaaag ggagattctt aggttagatc cattacctgt tgaaagtgca
      661 tacgctgcaa tccaaaaaga aattgcacat cgaactatat ttggcacaaa aaccgaaaca
      721 cccaaccact ctgatatcgg aactggtctg gtaacatcaa gaaccaaaga acacgaaggc
      781 actaacctta tttcaagaaa ccaacgccgt tctgatcatt cacaatcatc ctcccaagac
      841 aaagataaac tggtatgtag tgagtgtggg atgaaaagac acacaagaga acagtgtttc
      901 agggtgattg gattttcgga gtggtggaat gatggtcata agaaaggcaa ggttgcaatg
      961 gtaacagcaa cggcagcaac cggatgtaac cctgaggcca gcaactccgg taccactacc
     1021 acaggtggat tcggcctact tgcagtagaa caaccatcat ctggtggaga caccacaacg
     1081 tttgataaaa ctgatatttg ttttcaatca aaaccaaaca aagataaaat taaaacggaa
     1141 aatggtgggg ttatccaagt taagggagga ggaatggaca tcagaacggg ggagataatt
     1201 ggtcgtggta ctgaacgtga tggtttgtac tatgtggatg aatttactcg agatggtact
     1261 attatgttag ctcatgggac tcccgataga ataatactct tgagtgtgaa acttgtatct
     1321 tggcaaaaag ccatcaaaac tctttttaaa ccgagtaata caaaaattga acatccattt
     1381 gctttagttc attctgatgt ctggggaccc gcaagggtta atggggaaac cgagtatttc
     1441 tatggtacta aacacacaag tcagggggag actgaaccaa atgactctgt gagttgctta
     1501 gatgtaccgt catcggtaga agtagctcat agtaccaaac cacatagcac ttcatccgtc
     1561 agtactacaa atgagaatct tccccatacg gaggtaagtg cagaatctct tgaaactaat
     1621 acttctgacc ttgaaaatga ggatgtgtta gcacaggaaa atttaacagg tcaacatgaa
     1681 tctgaatcaa aaactgaacc tgaacctgaa caaccatcag aacctgaaca ttcatcagaa
     1741 ccagaacaac tatcagaatc agaaccatca cctgaaaccg aacaaccatc agaacctgaa
     1801 caacaaactg aacaacaata catccttcct ccgagaataa accgaggagt cccaccaaaa
     1861 aggttctctc ctgaaaaaga accatgtaga tcaagatacc ccgtggcaaa cattgcaaac
     1921 ggaaatctct caccagaagc taaacaattc acttccgcat tatactctga aaatattcca
     1981 aactcggtag aacaagccct aaaatcaccc aactggagaa aagcaatgga agaggaaatg
     2041 agagctcttc aagaaaacaa gacatgggaa aaatgttccc ttccaaaatc aaagaaacca
     2101 gttggatacc gatgggtatt tataatcaaa cataaagctg gtggtactat cgaaagatac
     2161 aatgctcgac ttgttgccaa aggatacact caaacctatg ggattgatta ctctgagact
     2221 ttttctccag tagccaagat cgacaccatc agagtccttt tctcagttgc tgcaaacaag
     2281 gattggccac tccattaa
//
LOCUS       XM_071831296             318 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable F-box protein
            At3g25550 (LOC139841063), mRNA.
ACCESSION   XM_071831296
VERSION     XM_071831296.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..318
                     /gene="LOC139841063"
                     /note="probable F-box protein At3g25550; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841063"
     CDS             1..318
                     /gene="LOC139841063"
                     /codon_start=1
                     /product="probable F-box protein At3g25550"
                     /protein_id="XP_071687397.1"
                     /db_xref="GeneID:139841063"
                     /translation="MNDVLEEILARLDVKDVVRCKSVCKSWYDLISSTYFVKSHLKHS
                     YIKKHEHGYLRVAFRGGFSLVGSCDGLVCISSNDDDQLLLTNPSTREVRKLPMPRIKY
                     RGK"
     misc_feature    7..108
                     /gene="LOC139841063"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(10..12,19..24,31..36,46..48,52..57,67..75,79..81)
                     /gene="LOC139841063"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    193..>294
                     /gene="LOC139841063"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgaatgatg tgcttgagga gatacttgca agattggatg tgaaagatgt tgttcgatgc
       61 aagagtgttt gtaagtcatg gtatgattta atatcatcta cttattttgt taaatctcat
      121 cttaaacata gctacataaa gaaacatgag catggatatt taagagttgc ttttcgcgga
      181 ggatttagtc tggttggttc atgtgatggg cttgtttgca tctcttctaa tgatgatgat
      241 cagttattac taactaatcc ttccactcga gaggttagaa aactgccaat gcctcgtatc
      301 aagtacaggg gaaaatga
//
LOCUS       XM_071831297             984 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841065), mRNA.
ACCESSION   XM_071831297
VERSION     XM_071831297.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..984
                     /gene="LOC139841065"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139841065"
     CDS             1..984
                     /gene="LOC139841065"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687398.1"
                     /db_xref="GeneID:139841065"
                     /translation="MNDVLEEILSRLDVEDVLRCKCVCKSWYNLISSSYFVKAHLERS
                     YNKKREHGCFRVFLRLDDFSHVGSCDGLVCIYPIRGEFVVTNPSTREVRKLPRTSMKY
                     REKVCWGFGYDSSTDDYKVVIGYNQSEHHTCFKVLSLKSNKWKFIGDDHYSSPFNYHH
                     GILYDGALHWFVDDTKKKKRIILSFDLSLEKFKEIPKPDDTKYVCDNRNRLGMFEERL
                     CIYRSYSMYNRCYQTIWVMKNYNCWQLLPPDYEGNKCGAATTACALERFPDNTWRLCG
                     YGKGYVSLWKSWYYVTSPIFVKSLVSPYLCEQPNIQKNNKRKRKAYIQGER"
     misc_feature    7..108
                     /gene="LOC139841065"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(10..12,19..24,31..36,46..48,52..57,67..75,79..81)
                     /gene="LOC139841065"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    196..>720
                     /gene="LOC139841065"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgaatgatg tgcttgagga gatactttca agattggatg tggaagatgt tcttcgatgc
       61 aagtgtgttt gtaagtcatg gtataattta atatcatcta gttattttgt taaagctcat
      121 cttgaacgta gctacaataa gaaacgtgaa catggatgtt ttagagtttt tttacgcctc
      181 gatgatttta gtcatgttgg ttcatgtgat gggcttgttt gcatctatcc tattaggggt
      241 gagtttgtag taactaatcc ttccactcga gaggttagaa aactaccaag aactagtatg
      301 aagtacaggg aaaaagtatg ttggggtttt ggttacgatt cttctaccga cgattacaag
      361 gttgttatag gctataatca atccgagcat catacgtgct ttaaagtgtt atctctaaaa
      421 tcaaataaat ggaaattcat tggagacgac cattattctt ctccctttaa ttatcatcat
      481 ggtattttat acgacggggc gctgcattgg tttgtggatg ataccaagaa gaagaagaga
      541 attattcttt cttttgattt atctctggag aaattcaaag aaatccccaa acctgatgac
      601 acaaaatatg tatgtgataa tcgaaacaga ctagggatgt ttgaagaacg tttatgcata
      661 tatcgttcct atagtatgta taatcgttgc taccaaacaa tatgggtgat gaaaaactat
      721 aattgttggc aactgctccc acctgattac gaaggtaata agtgtggtgc tgccactact
      781 gcatgcgcac ttgaacgctt tccagataac acttggcgtt tatgtggata tggtaaagga
      841 tatgtatctc tgtggaagag ttggtattat gttacttctc ctatatttgt caagtcactt
      901 gtatctccat atctctgtga gcaaccaaac atacagaaga ataacaagag gaagaggaag
      961 gcatatatac aaggggaacg ataa
//
LOCUS       XM_071831298             633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841066), mRNA.
ACCESSION   XM_071831298
VERSION     XM_071831298.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..633
                     /gene="LOC139841066"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841066"
     CDS             1..633
                     /gene="LOC139841066"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687399.1"
                     /db_xref="GeneID:139841066"
                     /translation="MTCTRLDIANAVGKLSRFTSNPGSHHWQAMNRVFKYLKRTKDFG
                     ITYTGFPSILEGYSDASWITNMEDHSLTTGWIFLLGGGAISWASKKQTCITNSIMESE
                     FVALVAAGNEAEWLRNLVNEIPLWTKPIPPIGMHCDSASKVAKAYSHMYNGKSRHLGV
                     RHSMIRELITNGVISIDFVRSEQNLADPLTKGLARDSVHKSSIGVGLKSI"
     misc_feature    163..588
                     /gene="LOC139841066"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(175..186,289..297,304..306,412..414,490..492,
                     571..573)
                     /gene="LOC139841066"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgacttgca ctagactgga tattgccaat gcggtgggta aattgagtag atttactagt
       61 aacccgggtt ctcaccattg gcaagctatg aatagagtat ttaagtattt gaagcgaacc
      121 aaggactttg gtatcacata taccggcttt ccttctattt tagaaggtta ttcggatgca
      181 agttggataa ccaatatgga agatcattct ttaactactg gttggatatt cctacttggt
      241 ggaggggcaa tttcatgggc ttccaagaag caaacatgta ttacaaattc gataatggag
      301 tcggaatttg ttgcattggt tgcggcgggt aatgaagccg agtggttaag gaatttggta
      361 aatgaaattc ctttgtggac aaagcccatt cctcccattg gtatgcattg tgatagtgct
      421 tcaaaggtgg ctaaggcata tagtcacatg tataatggta agtctagaca cttgggtgtt
      481 agacattcca tgatacgtga attaatcaca aatggagtga tctccattga ttttgtaaga
      541 tcggaacaaa atctagcgga tcccttgacc aagggactag ccagagactc ggtgcacaag
      601 tcgtctattg gtgtgggatt gaagtccatc taa
//
LOCUS       XM_071831300            1164 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g23880-like (LOC139841067), mRNA.
ACCESSION   XM_071831300
VERSION     XM_071831300.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1164
                     /gene="LOC139841067"
                     /note="F-box/kelch-repeat protein At3g23880-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841067"
     CDS             1..1164
                     /gene="LOC139841067"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g23880-like"
                     /protein_id="XP_071687401.1"
                     /db_xref="GeneID:139841067"
                     /translation="MDVVREILSRLDVLDVLRCKSICKSWYNLISTNCVVKAHLKHSY
                     IFVVEDILARLDVKDVSRCKCICKLWYKLISSNYFAKAHLKSSYNNNREHGYLRIQLH
                     RMINNYTELPYCMMVGSCDGLVCISPIDGKLLVTNPSTREVRKLPNLPYNSRFNVCWG
                     FGYDFSTDDYKVVVGFNESEHHMRFQVLSLKSNQWKIIGEIDTLTYYTLIPGSGVLYD
                     GALHWLVYDTKEKKTVLLSFDLSLEKFKEIPQPCDYPNTLGTFEECLCIVGPYNSISN
                     SRDTWVMNKYGCWQMLPCDYKGDKYADATTVYLLHVVKDHTWRLRYGDKENVDMSWQR
                     LGIYGTPIQNLFSGGHEDKKAGSSTAVNVSSSKGLFQRLYWRTVDKSHLHRAL"
     misc_feature    4..99
                     /gene="LOC139841067"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(4..12,19..24,31..33,64..72,76..78,85..87)
                     /gene="LOC139841067"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(7..9,16..21,28..33,43..45,49..54,64..72,76..78)
                     /gene="LOC139841067"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    139..237
                     /gene="LOC139841067"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(139..141,148..153,160..165,175..177,181..186,
                     196..204,208..210)
                     /gene="LOC139841067"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    349..>861
                     /gene="LOC139841067"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggatgtgg ttcgggagat actttcaaga ttggatgtgc tagatgtcct ccgatgcaag
       61 agcatatgta aatcatggta taatttaata tcaactaatt gcgtcgttaa agctcatctc
      121 aaacatagtt acatatttgt ggttgaggat atacttgcaa gattggatgt aaaagatgtt
      181 tctcgatgca agtgtatttg taagttatgg tataagttaa tatcatctaa ttattttgct
      241 aaagctcatc ttaaaagtag ctataataac aatcgcgaac atggatattt aagaatccaa
      301 ttacatcgga tgatcaataa ttacactgaa ttgccttatt gtatgatggt tggctcatgt
      361 gatgggcttg tttgcatctc tcctattgat ggcaagttat tagtaactaa tccttccact
      421 cgagaggtta gaaaactgcc aaaccttcct tacaatagca ggttcaatgt gtgttggggt
      481 tttggttatg atttttctac cgatgattac aaggttgttg tcggatttaa tgaatctgag
      541 catcatatgc gctttcaagt attatcttta aaatcaaatc aatggaaaat cattggagaa
      601 atagatactt taacttatta tactcttatt cctggtagtg gtgttttata cgatggggcg
      661 cttcattggc ttgtgtatga tacaaaggag aagaagacag ttcttctttc atttgattta
      721 tctctagaga aattcaaaga aattccccaa ccatgtgatt atccaaacac actagggaca
      781 tttgaagaat gtttatgcat agttggtcca tataattcta tctctaatag ccgtgacaca
      841 tgggtgatga ataaatacgg ttgttggcaa atgctcccat gtgattacaa aggtgataag
      901 tatgctgatg ccactactgt ttacttactc catgttgtta aagatcacac ttggcgttta
      961 cgttatggtg ataaagaaaa tgtagatatg tcttggcaga gacttggaat atacgggact
     1021 cctattcaaa atttgttctc gggtggtcat gaagataaga aggccggttc ttcgactgcg
     1081 gttaatgtgt cgtcgagcaa aggtcttttt caaagattgt attggcggac cgtggacaaa
     1141 tcccaccttc atcgggcact ttga
//
LOCUS       XM_071831301             411 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841068), mRNA.
ACCESSION   XM_071831301
VERSION     XM_071831301.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..411
                     /gene="LOC139841068"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139841068"
     CDS             1..411
                     /gene="LOC139841068"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687402.1"
                     /db_xref="GeneID:139841068"
                     /translation="MEDEQIAKNPLSVNHGITPENTGPKVNPTLYRAIIGSLMYLTAS
                     RPDIMFATCLCARYQAQPNVNHMLAAKKIMRYLKGTPCLGIWYPRKNGVDLTEFSDSD
                     YAGCKRDFKSTSDGYQFLGSRLVSWQCKKQTTVV"
     misc_feature    292..>405
                     /gene="LOC139841068"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggaagatg aacaaattgc caagaatcct ctgtcagtga atcacgggat tacaccagaa
       61 aatacagggc caaaagtcaa tccaacccta tacagggcta ttattggttc tttaatgtat
      121 cttacggcgt ctcgcccaga tatcatgttt gcaacttgtt tgtgcgctcg ttatcaggca
      181 caaccgaatg tgaatcatat gttagcagct aagaagatca tgcgttatct gaagggaact
      241 ccatgtttgg gcatatggta tccaagaaag aatggggttg atctaacgga atttagtgat
      301 tctgattatg cgggttgtaa gagagacttc aaatcaacct cggatggtta tcagtttcta
      361 ggtagcaggt tggtaagctg gcagtgtaag aaacaaacga cagtcgtata a
//
LOCUS       XM_071831302            1230 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841069), mRNA.
ACCESSION   XM_071831302
VERSION     XM_071831302.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1230
                     /gene="LOC139841069"
                     /note="uncharacterized LOC139841069; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841069"
     CDS             1..1230
                     /gene="LOC139841069"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687403.1"
                     /db_xref="GeneID:139841069"
                     /translation="MDKTFKMLEFIIDDDSDDEKIYNFVSSLADEDVEGEATSSRVPR
                     PRTYIPRDREDAALRLYNDYFSETPNYTEKNFKRRYRMSRELFLRIIEGISNFNSSDI
                     PDYFMFFRERPDATGHQSLTILQKCTVAIRQMAYGTTPDLHDEYVKIGEKTAALCLDN
                     FCRCVFHLFARQYLRKPTAEDIARLYNFHAQKHGLPGMLGSIDCMHWEWKNCPIAWQG
                     QYTRGANNDINVLNYSPLFNTIKNETVPPSPFDVNGHHYERGYYLGDGIYPDWAMLVK
                     APHSPTDEPRKKIKRFQESARKDIERAFGVLQGRFQMLKTLARSMDFNKIRRHMYACI
                     ILHNMIQENNGFVIGKKEERMIQRNPPRRLHRDLRDRDAMVKEIRDKQVHKQLEADLT
                     EHVWNLSPYFRTANIIE"
     misc_feature    514..1035
                     /gene="LOC139841069"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataaaa cattcaaaat gctcgagttt attattgatg acgattcgga tgatgaaaaa
       61 atatataatt ttgttagtag tttggcggac gaagatgtcg agggagaagc tacaagttca
      121 cgagtccctc gcccccgtac ctatattcca agggatcgcg aagatgcggc actgaggtta
      181 tacaacgatt atttttctga aactccaaat tatacggaaa agaactttaa acgacgttat
      241 cgaatgagtc gtgaattatt tctccgtatc atcgaaggta tatcaaactt taatagtagc
      301 gatattcccg attattttat gttttttagg gaacgtcccg atgctactgg tcatcaaagt
      361 ttgacgatac ttcaaaaatg cacggtggcc atacgtcaaa tggcgtatgg aactacacct
      421 gatttacatg acgaatacgt aaaaattggt gagaaaacag ctgctttatg tttagataat
      481 ttttgtagat gcgtgtttca tttgtttgct agacagtact tgagaaaacc aacagccgaa
      541 gatattgctc ggctttataa ttttcatgcc caaaaacatg gtttaccggg tatgcttggt
      601 agtattgatt gtatgcattg ggagtggaag aattgtccaa ttgcgtggca aggtcaatat
      661 actagaggtg cgaacaacga cattaacgtt ttaaattatt caccattgtt caacactatt
      721 aaaaatgaaa ctgttccacc ttcaccattc gatgttaacg ggcatcacta cgaaagaggt
      781 tattacctag gtgatggtat ataccccgat tgggcaatgt tggtcaaagc tccccattct
      841 ccaactgacg aaccgcgaaa aaaaattaaa aggtttcaag aaagtgcaag aaaagatatt
      901 gagcgtgcat ttggagtatt acagggtaga tttcaaatgt taaaaactct ggcgagatct
      961 atggacttca acaaaataag aagacatatg tatgcgtgta tcatattaca taacatgatt
     1021 caagaaaata acgggtttgt tattgggaag aaagaagaaa gaatgataca acggaaccca
     1081 ccacgacggt tacacaggga tttgagggat cgagatgcaa tggttaagga aataagagat
     1141 aagcaagttc acaaacagtt agaggcagat ttaaccgagc acgtttggaa cttatcacct
     1201 tactttcgta ccgctaatat tattgagtaa
//
LOCUS       XM_071831303            1026 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytosolic sulfotransferase
            13-like (LOC139841070), mRNA.
ACCESSION   XM_071831303
VERSION     XM_071831303.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1026
                     /gene="LOC139841070"
                     /note="cytosolic sulfotransferase 13-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841070"
     CDS             1..1026
                     /gene="LOC139841070"
                     /codon_start=1
                     /product="cytosolic sulfotransferase 13-like"
                     /protein_id="XP_071687404.1"
                     /db_xref="GeneID:139841070"
                     /translation="MSIDDTSTLSSSNKPREQDHEHENALISNLVDRYKDKLTTFPIE
                     KGCVFGSLYMYQGFWYLSQHKLSIETLFALHETFIARPNDVYVATLPKSGTTWLKAIV
                     FSTVNRSRYKYNCLATHPLRVSNPHKCCPFIETEFYESAPTYNDTHSPRIFGTHTPYT
                     SLPRSIIDSGCRIIYMCRNPKDVLVSLFHFSDKVREQSGDLMKINDAFELFSKGVMPY
                     GPYWDHVKEYNSASLERPTKVLFLTYENMKKDTANGVKRIAEFLGYPFTDEEVDQGSI
                     EEIVKLCSFESLKEVDQKGNYHGVPNGSYFREGKVGDWTNHLTNEMCMILDQITKEKF
                     NGLDILC"
     misc_feature    13..1020
                     /gene="LOC139841070"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_1;
                     cl21551"
                     /db_xref="CDD:473908"
ORIGIN      
        1 atgtcgattg atgatacttc cactctgtca tcttctaata aacctcgtga acaagatcat
       61 gaacatgaaa acgcgcttat atcaaacctt gttgatcgat acaaggataa gttaacgacg
      121 tttcccatcg aaaaaggttg tgtgtttgga agcctataca tgtatcaagg cttttggtat
      181 ctttcacaac acaaactctc cattgaaact ttgttcgctt tgcacgaaac ttttatcgct
      241 cgaccaaatg atgtctacgt agccacattg cctaaatccg gaacaacatg gctgaaggcg
      301 attgtgtttt ctacggttaa ccgaagtagg tacaaataca actgtcttgc aactcatcca
      361 ttacgtgtat ctaaccctca taaatgttgt ccttttattg aaaccgaatt ttatgaaagt
      421 gcacctactt ataatgatac acattcgcca cgcatttttg gtactcatac tccttacact
      481 tctttgcctc gatccattat tgattccggt tgtcgcataa tttacatgtg tagaaaccct
      541 aaagacgttt tggtctcttt atttcacttt tcagacaaag tgagagaaca atcgggtgat
      601 ctcatgaaaa taaatgatgc attcgagttg tttagtaaag gtgtcatgcc gtacgggccg
      661 tattgggatc atgtgaaaga gtataatagt gctagcttag aacgccctac aaaggtttta
      721 tttttaacat acgagaacat gaaaaaggac actgcaaacg gtgtaaaacg tatagccgag
      781 ttcttgggct acccttttac agatgaagaa gtggatcaag gttcgattga agagattgtg
      841 aagttgtgta gttttgaaag tttaaaagag gttgatcaga agggaaatta tcatggtgtc
      901 cctaatggtt cttattttag agaaggtaaa gttggagatt ggactaatca tcttactaat
      961 gaaatgtgca tgattttgga tcaaatcaca aaagaaaagt ttaatggttt ggatatttta
     1021 tgttaa
//
LOCUS       XM_071831304            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytosolic sulfotransferase
            13-like (LOC139841071), mRNA.
ACCESSION   XM_071831304
VERSION     XM_071831304.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139841071"
                     /note="cytosolic sulfotransferase 13-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139841071"
     CDS             1..1035
                     /gene="LOC139841071"
                     /codon_start=1
                     /product="cytosolic sulfotransferase 13-like"
                     /protein_id="XP_071687405.1"
                     /db_xref="GeneID:139841071"
                     /translation="MSIPISSQPSPRKSNNEDNQEMANLSLIFDKYKDKLITLPKEKG
                     WISENLYLYQGFWHQSKRRISAETVMAVQDGFKARQTDIYLATLPKSGTTWLKALVFA
                     IVRRNELQTNCKTSCVSTHPLLSSNPHKCVPFVESVILRNTPTYDDQYSSRLFATHIP
                     YTSLPQTILDSGCRVVYLCRNPKDVLVSMFHFANILRDKTRTLMTIEEAFELFSKGVM
                     PLGPYWDHVKGYHKASLEHKHKVMFLTYEGMKMDTMNNVKRLAMFLGYPFTEEEEAKG
                     AVEEIVNLCSFDNLSEVNKVGNLHEGIPNNAFFREGKVGDWSNHLKDEMSQILNQITN
                     EKFLGLDISF"
     misc_feature    4..1017
                     /gene="LOC139841071"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_1;
                     cl21551"
                     /db_xref="CDD:473908"
ORIGIN      
        1 atgtcgattc ctatatcttc tcaaccctct ccaagaaaat ctaacaatga agataatcaa
       61 gaaatggcga atctgtctct cattttcgat aaatacaaag ataaattgat aacgctgcca
      121 aaagagaaag gttggatatc cgaaaatcta tacttgtacc aaggcttttg gcatcagtct
      181 aagcgtcgaa tctcagctga gaccgtgatg gctgtgcaag atggttttaa agctcgtcaa
      241 accgatatct acttagccac attaccaaaa tccgggacaa cttggctcaa ggcgctcgtt
      301 tttgctatag tacgtagaaa tgagttacaa accaactgta aaacaagttg tgtttcaact
      361 caccctctgc ttagttctaa tcctcataaa tgtgtaccct tcgttgaatc cgtaattctt
      421 agaaacacac caacttatga tgatcaatat tcgtcacgtc tctttgcaac acatatacct
      481 tacacttcgt tacctcaaac aattcttgat tctggttgtc gcgtagttta tttatgtagg
      541 aaccctaaag acgttttggt ctctatgttt cactttgcga acatattgag agacaaaacg
      601 cgtactctaa tgacaattga agaggccttc gagttattta gtaaaggggt gatgccatta
      661 gggccatatt gggaccatgt gaaaggttac cataaggcta gtttagaaca caaacacaag
      721 gttatgtttt taacatatga aggtatgaaa atggacacca tgaataatgt taagcgactc
      781 gcaatgttct tgggataccc ttttactgag gaagaagagg ctaaaggtgc ggtggaagaa
      841 attgttaatc tatgtagttt tgacaactta agtgaggtta ataaggttgg aaatttacat
      901 gaaggcatac cgaataacgc gttttttaga gaagggaaag ttggggattg gagtaatcat
      961 ctcaaggatg aaatgagcca gattttaaac caaattacaa atgaaaagtt cctaggtttg
     1021 gatatctctt tctag
//
LOCUS       XM_071831305             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841073), mRNA.
ACCESSION   XM_071831305
VERSION     XM_071831305.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139841073"
                     /note="uncharacterized LOC139841073; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841073"
     CDS             1..498
                     /gene="LOC139841073"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687406.1"
                     /db_xref="GeneID:139841073"
                     /translation="MSSTSSSNEEYLMEVLDIIDNEALESENETESSNKRRYIDREHE
                     AAHLRLITYYFVAAYGDTPDLFDEYLQMSERTCCESLMNFCKCIIDLYKDEYMREPTT
                     NDIKRLYGAHEDIHGLPGMMESIDCMHWEWEKCLVAWKCQFTRGDHKVPTIMLEVVAS
                     YDNWI"
     misc_feature    280..>495
                     /gene="LOC139841073"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcttcaa catcatcgtc taacgaagag tatttaatgg aagtgctcga tataatagac
       61 aacgaggcgt tagaaagtga aaatgagacg gaaagttcaa acaaacgtcg ttacatagac
      121 cgtgaacatg aagccgcaca tttacgtctt attacctact attttgttgc agcttatggt
      181 gatacacccg atctttttga cgagtacttg caaatgtcag aacgaacatg ttgtgaatcg
      241 ctaatgaact tctgtaagtg tattattgat ttatataaag atgaatatat gcgagagcct
      301 accactaatg atatcaaacg attgtatggg gctcacgaag atattcacgg tttacctgga
      361 atgatggaaa gcatagattg tatgcattgg gagtgggaaa aatgtctcgt tgcatggaaa
      421 tgtcaattta ctcgaggcga tcacaaagtt ccaactatta tgctagaagt cgtagcctca
      481 tatgataact ggatttga
//
LOCUS       XM_071831306            1060 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides PLASMODESMATA
            CALLOSE-BINDING PROTEIN 1-like (LOC139841074), mRNA.
ACCESSION   XM_071831306
VERSION     XM_071831306.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1060
                     /gene="LOC139841074"
                     /note="PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139841074"
     CDS             162..782
                     /gene="LOC139841074"
                     /codon_start=1
                     /product="PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like"
                     /protein_id="XP_071687407.1"
                     /db_xref="GeneID:139841074"
                     /translation="MVVFALSIVIFLAMTGYSSAAYCVCNSAQSDSVLQKNIDYACGN
                     GADCAQILQNGACFNPNTVKDHCNYAVNSYYQRKGQIQGSCDFSGTATVSQTAPAGAT
                     SACYSGSPGSTTPTTSSPPGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTNTGTGT
                     GTGTGLTPSFGLGPSGTTDNSRAESSNSLTLLTLSVQGLILLLSLM"
     misc_feature    225..467
                     /gene="LOC139841074"
                     /note="Possibly involved in carbohydrate binding; Region:
                     X8; smart00768"
                     /db_xref="CDD:197867"
ORIGIN      
        1 cccttcaact tcgtcctctg tttcttgtcc actctagaga aaatagaata aaataaaata
       61 aaatctttcc actctctctc accatctctg caattttttg ctccttttaa caccaaattc
      121 tgtcataatt aagcaacaat ccaacgcatc tggttacaaa catggttgtt tttgcacttt
      181 ccattgtgat tttcttggcc atgaccggtt attcaagtgc agcatattgt gtctgtaact
      241 ctgcacagag tgactcagtt cttcaaaaga acatagatta tgcatgtgga aatggagctg
      301 attgtgctca aatccttcaa aatggtgctt gtttcaaccc aaatactgtt aaagatcact
      361 gcaattatgc tgttaacagc tattatcaaa ggaagggtca gatacaagga agctgtgatt
      421 tttcaggcac agctacagtc agccaaacag ccccagctgg tgcaacttct gcttgttatt
      481 ctgggagccc aggctcaaca acgccgacca cctcatcacc acccgggact ggcaccggca
      541 ctgggaccgg caccggcaca ggcaccggca caggcactgg aacaggaacc ggcactggag
      601 gaaccgggac tggaacgggt actaacacgg gtacaggcac aggaacaggt accgggttga
      661 cgccatcgtt tggtcttggt ccaagtggca cgacagataa cagtagggcc gagtcttcta
      721 actcattgac tttactaact ctttcggttc agggcttgat cttattgttg agtttgatgt
      781 aatgatgagg gtacattatg ttgtgtggtt atgattaatc catgagtcgg gatgtaattt
      841 acgcggtggt caggttgtac tttgtagtag ggaatcgaat attggttgta atccatgata
      901 gggtattttt tttattcgtc tatcttttgt ttgtggagaa tatgtgcctt ttaaaacgag
      961 gctgccaaat atgttcttga tgacttttag aagttttcat ctttttattt gtatctaaag
     1021 gtcacctttt taaatttgtt tagattctat gaccactttt
//
LOCUS       XM_071831307            1602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841075), mRNA.
ACCESSION   XM_071831307
VERSION     XM_071831307.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139841075"
                     /note="uncharacterized LOC139841075; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841075"
     CDS             1..1602
                     /gene="LOC139841075"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687408.1"
                     /db_xref="GeneID:139841075"
                     /translation="MIIVNVYGPHNYIKKKEMWNSLEKLLEFDNDNWVLCGDFNEVRN
                     EDERRNCIFNARRATIFNTFMNNSKLIEVPLEGKRFTRIWDNGRRFSKLDRFLVSEHF
                     LLRWGDLYVSALNRKDTDHCPLVLRNKWIDFGPKRTRVFDVWLDHKEADKIISKTWDK
                     SVEGNRADLIFCRKLKATRFALPSKSTFGKIDSESEEYRKEAAIWESRAESSDLEESD
                     RSKWMDVMGKRLKKEAEKRNMMKQKARVKWATDGEENSKFFHAYIRRRTCKNNIHGLN
                     INGKWEEDPGETSHGCNTSFVSLIPKKQDSVELGDYRPISLIGGYYKIIAKLLSNRLR
                     KVVPNLVGDEQTAFLRGKSILDGVLILNEAVDESKRCKAKTFLFKADFSKAFDSLKWK
                     FLFDIMRLMGFGSRWIKWIFSCLRYASISVLVNGSPTKEFKLEKGVRQGDPLSPFLFI
                     LASEGLNMIIKNASNDGLFEGVDIGKDKVRLTHLQYADDTIFIGEWRRRNIHNVMLIL
                     KSFEELSGLELMPLNAVYSGWASHP"
     misc_feature    <1..381
                     /gene="LOC139841075"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,118..120,361..363)
                     /gene="LOC139841075"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    880..1557
                     /gene="LOC139841075"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1323,1456..1458,1462..1467)
                     /gene="LOC139841075"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1320,1462..1464)
                     /gene="LOC139841075"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1321..1323
                     /gene="LOC139841075"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgattatag ttaacgtata tggtccacac aactatataa agaagaaaga gatgtggaat
       61 tcgttagaaa aattactcga gtttgacaac gataattggg tactgtgtgg agatttcaac
      121 gaggttagga atgaagatga acggcgtaat tgtattttca atgctagaag agctacaata
      181 tttaatacat ttatgaacaa ttcgaaactc attgaggtgc cattagaggg taagagattt
      241 actagaattt gggataacgg acgtaggttc agcaaattgg atcggtttct agtatcagaa
      301 cattttttgc ttcggtgggg tgacttatac gtttcagctc ttaatcgcaa ggacaccgat
      361 cactgcccac ttgtattgcg aaataaatgg attgattttg gtcctaagcg caccagggta
      421 ttcgatgtct ggcttgacca taaagaggct gataaaatca tatccaaaac ttgggataaa
      481 tctgtagaag gcaatagggc ggacttgatt ttctgcagga aattgaaagc tactagattt
      541 gctttaccga gtaaatctac ttttggtaaa attgattcag aaagtgagga atacagaaaa
      601 gaagcagcta tatgggaatc gagagctgaa tcttcggatt tagaagagtc tgatcggtca
      661 aagtggatgg acgtgatggg aaaaaggttg aaaaaggaag ctgaaaaacg gaatatgatg
      721 aaacaaaagg cacgggtcaa atgggcaacc gacggggaag aaaattccaa gttttttcat
      781 gcttatatta gaagacgcac ctgcaaaaat aatattcatg gtttgaatat caatggcaaa
      841 tgggaagaag atcctggtga aacatctcat ggatgcaaca cctcatttgt ttcgttaatt
      901 cctaaaaaac aggattcggt ggagctcgga gattatcgcc cgataagttt aataggcgga
      961 tattacaaga ttattgccaa acttctatcc aatcgcctaa gaaaggttgt accaaatctg
     1021 gtgggagacg agcaaacagc gtttctaaga ggtaaatcaa ttttagatgg agttttaatt
     1081 cttaacgagg ccgttgatga atcaaaaaga tgcaaggcga agacttttct tttcaaagca
     1141 gatttctcta aagcttttga ctctcttaag tggaagttcc tattcgatat tatgcgtctt
     1201 atgggtttcg ggtcccggtg gatcaaatgg atcttttctt gtttacgata tgcctctata
     1261 tccgttctag tgaatggatc tcctacaaaa gagttcaaat tggaaaaggg agttaggcag
     1321 ggcgacccgc tctcgccttt tctctttata cttgcaagtg aggggttaaa catgattata
     1381 aagaatgcat ccaatgatgg gctgttcgaa ggagtagata tcggcaaaga caaagtccgt
     1441 ctcactcatc ttcaatacgc ggacgatacg atttttattg gtgagtggag aaggagaaat
     1501 attcataatg ttatgcttat tcttaaaagt tttgaagaat tgtctgggtt agaattaatg
     1561 ccgctaaatg ctgtctattc gggttgggcg tctcatcctt ag
//
LOCUS       XM_071831309            1602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841076), mRNA.
ACCESSION   XM_071831309
VERSION     XM_071831309.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139841076"
                     /note="uncharacterized LOC139841076; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841076"
     CDS             1..1602
                     /gene="LOC139841076"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687410.1"
                     /db_xref="GeneID:139841076"
                     /translation="MIIVNVYGPHNYIKKKEMWNSLEKLLEFDNDNWVLCGDFNEVRN
                     EDERRNCIFNARRATIFNTFMNNSKLIELPLEGKRFTRIWDNGRRFSKLDRFLVSEHF
                     LLRWGDLYVSALNRKDTDHCPLVLRNKWIDFGPKRTRVFDVWLDHKEADKIISKTWDK
                     SVEGNRADLIFCRKLKATRFALPSKSTFGKIDSESEEYRKEAAIWESRAESSDLEESD
                     RSKWMDVMGKRLKKEAEKRNMMKQKARVKWATDGEENSKFFHAYIRRRTCKNNIHGLN
                     INGKWEEDPGETSHGCNTSFVSLIPKKQDSVELGDYRPISLIGGYYKIIAKLLSNRLR
                     KVVPNLVGDEQTAFLRGKSILDGVLILNEAVDESKRCKAKTFLFKADFSKAFDSLKWK
                     FLFDIMRLMGFGSRWIKWIFSCLRYASISVLVNGSPTKEFKLEKGVRQGDPLSPFLFI
                     LASEGLNMIIKNASNDGLFEGVDIGKDKVRLTHLQYADDTIFIGEWRRRNIHNVMLIL
                     KSFEELSGLELMPLNAVYSGWASHP"
     misc_feature    <1..381
                     /gene="LOC139841076"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,118..120,361..363)
                     /gene="LOC139841076"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    880..1557
                     /gene="LOC139841076"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1323,1456..1458,1462..1467)
                     /gene="LOC139841076"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1320,1462..1464)
                     /gene="LOC139841076"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1321..1323
                     /gene="LOC139841076"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgattatag ttaacgtata tggtccacac aactatataa agaagaaaga gatgtggaat
       61 tcgttagaaa aattactcga gtttgacaac gataattggg tactgtgtgg agatttcaac
      121 gaggttagga atgaagatga acggcgtaat tgtattttca atgctagaag agctacaata
      181 tttaatacat ttatgaacaa ttcgaaactc attgagttgc cattagaggg taagagattt
      241 actagaattt gggataacgg acgtaggttc agcaaattgg atcggtttct agtatcagaa
      301 cattttttgc ttcggtgggg tgacttatac gtttcagctc ttaatcgcaa ggacaccgat
      361 cactgcccac ttgtattgcg aaataaatgg attgattttg gtcctaagcg caccagggta
      421 ttcgatgtct ggcttgacca taaagaggct gataaaatca tatccaaaac ttgggataaa
      481 tctgtagaag gcaatagggc ggacttgatt ttctgcagga aattgaaagc tactagattt
      541 gctttaccga gtaaatctac ttttggtaaa attgattcag aaagtgagga atacagaaaa
      601 gaagcagcta tatgggaatc gagagctgaa tcttcggatt tagaagagtc tgatcggtca
      661 aagtggatgg acgtgatggg aaaaaggttg aaaaaggaag ctgaaaaacg gaatatgatg
      721 aaacaaaagg cacgggtcaa atgggcaacc gacggggaag aaaattccaa gttttttcat
      781 gcttatatta gaagacgcac ctgcaaaaat aatattcatg gtttgaatat caatggcaaa
      841 tgggaagaag atcctggtga aacatctcat ggatgcaaca cctcatttgt ttcgttaatt
      901 cctaaaaaac aggattcggt ggagctcgga gattatcgcc cgataagttt aataggcgga
      961 tattacaaga ttattgccaa acttctatcc aatcgcctaa gaaaggttgt accaaatctg
     1021 gtgggagacg agcaaacagc gtttctaaga ggtaaatcaa ttttagatgg agttttaatt
     1081 cttaacgagg ccgttgatga atcaaaaaga tgcaaggcga agacttttct tttcaaagca
     1141 gatttctcta aagcttttga ctctcttaag tggaagttcc tattcgatat tatgcgtctt
     1201 atgggtttcg ggtcccggtg gatcaaatgg atcttttctt gtttacgata tgcctctata
     1261 tccgttctag tgaatggatc tcctacaaaa gagttcaaat tggaaaaggg agttaggcag
     1321 ggcgacccgc tctcgccttt tctctttata cttgcaagtg aggggttaaa catgattata
     1381 aagaatgcat ccaatgatgg gctgttcgaa ggagtagata tcggcaaaga caaagtccgt
     1441 ctcactcatc ttcaatacgc tgacgatacg atttttattg gtgagtggag aaggagaaat
     1501 attcataatg ttatgcttat tcttaaaagt tttgaagaat tgtctgggtt agaattaatg
     1561 ccgctaaatg ctgtctattc gggttgggcg tctcatcctt ag
//
LOCUS       XM_071831310            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytosolic sulfotransferase
            13-like (LOC139841077), mRNA.
ACCESSION   XM_071831310
VERSION     XM_071831310.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139841077"
                     /note="cytosolic sulfotransferase 13-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139841077"
     CDS             1..1035
                     /gene="LOC139841077"
                     /codon_start=1
                     /product="cytosolic sulfotransferase 13-like"
                     /protein_id="XP_071687411.1"
                     /db_xref="GeneID:139841077"
                     /translation="MSIPISSQPSPRKSNNEDNQEMANLSLIFDKYKDKLITLPKEKG
                     WISENLYLYQGFWHQSKRRISAETVMAVQDGFKARQTDIYLATLPKSGTTWLKALVFA
                     IVRRNELQTNCKTSCVSTHPLLSSNPHKCVPFVESVILRNTPTYDDQYSPRLFATHIP
                     YTSLPQTILDSGCRVVYLCRNPKDVLVSMFHFANILRDKTRTLMTIEEAFELFSKGVM
                     PLGPYWDHVKGYHKASLEHKHKVMFLTYEGMKMDTMNNVKRLAMFLGYPFTEEEEAKG
                     AVEEIVNLCSFDNLSEVNKVGNLHEGIPNNAFFREGKVGDWSNHLKDEMSQILNQITN
                     EKFLGLDISF"
     misc_feature    4..1017
                     /gene="LOC139841077"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_1;
                     cl21551"
                     /db_xref="CDD:473908"
ORIGIN      
        1 atgtcgattc ctatatcttc tcaaccctct ccaagaaaat ctaacaatga agataatcaa
       61 gaaatggcga atctgtctct cattttcgat aaatacaaag ataaattgat aacgctgcca
      121 aaagagaaag gttggatatc cgaaaatcta tacttgtacc aaggcttttg gcatcagtct
      181 aagcgtcgaa tctcagctga gaccgtgatg gctgtgcaag atggttttaa agctcgtcaa
      241 accgatatct acttagccac attaccaaaa tccgggacaa cttggctcaa ggcgctcgtt
      301 tttgctatag tacgtagaaa tgagttacaa accaactgta aaacaagttg tgtttcaact
      361 caccctctgc ttagttctaa tcctcataaa tgtgtaccct tcgttgaatc cgtaattctt
      421 agaaacacac caacttatga tgatcaatat tcgccacgtc tctttgcaac acatatacct
      481 tacacttcgt tacctcaaac aattcttgat tctggttgtc gcgtagttta tttatgtagg
      541 aaccctaaag acgttttggt ctctatgttt cactttgcga acatattgag agacaaaacg
      601 cgtactctaa tgacaattga agaggccttc gagttattta gtaaaggggt gatgccatta
      661 gggccatatt gggaccatgt gaaaggttac cataaggcta gtttagaaca caaacacaag
      721 gttatgtttt taacatatga aggtatgaaa atggacacca tgaataatgt taagcgactc
      781 gcaatgttct tgggataccc ttttactgag gaagaagagg ctaaaggtgc ggtggaagaa
      841 attgttaatc tatgtagttt tgacaactta agtgaggtta ataaggttgg aaatttacat
      901 gaaggcatac cgaataacgc gttttttaga gaagggaaag ttggggattg gagtaatcat
      961 ctcaaggatg aaatgagcca gattttaaac caaattacaa atgaaaagtt cctaggtttg
     1021 gatatctctt tctag
//
LOCUS       XM_071831311             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841078), mRNA.
ACCESSION   XM_071831311
VERSION     XM_071831311.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139841078"
                     /note="uncharacterized LOC139841078; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841078"
     CDS             1..498
                     /gene="LOC139841078"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687412.1"
                     /db_xref="GeneID:139841078"
                     /translation="MSSTSSSNEEYLMEVLDIIDNEALESENETESSNKRRYIDREHE
                     AAHLRLITYYFVAAYGDTPDLFDEYLQMSERTCRESLMNFCKCIIDLYKDEYMREPTT
                     NDIKRLYGAHEDIHGLPGMMESIDCMHWEWEKCLVAWKCQFTRGDHKVPTIMLEVVAS
                     YDNWI"
     misc_feature    280..>495
                     /gene="LOC139841078"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcttcaa catcatcgtc taacgaagag tatttaatgg aagtgctcga tataatagac
       61 aacgaggcgt tagaaagtga aaatgagacg gaaagttcaa acaaacgtcg ttacatagac
      121 cgtgaacatg aagccgcaca tttacgtctt attacctact attttgttgc agcttatggt
      181 gatacacctg atctttttga cgagtacttg caaatgtcag aacgaacatg tcgtgaatcg
      241 ctaatgaact tctgtaagtg tattattgat ttatataaag atgaatatat gcgagagcct
      301 accactaatg atatcaaacg attgtatggg gctcacgaag atattcacgg tttacctgga
      361 atgatggaaa gcatagattg tatgcattgg gagtgggaaa aatgtctcgt tgcatggaaa
      421 tgtcaattta ctcgaggcga tcacaaagtt ccaactatta tgctagaagt cgtagcctca
      481 tatgataact ggatttga
//
LOCUS       XM_071831312            1602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841079), mRNA.
ACCESSION   XM_071831312
VERSION     XM_071831312.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139841079"
                     /note="uncharacterized LOC139841079; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841079"
     CDS             1..1602
                     /gene="LOC139841079"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687413.1"
                     /db_xref="GeneID:139841079"
                     /translation="MIIVNVYGPHNYIKKKEMWNSLEKLLEFDNDNWVLCGDFNEVRN
                     EDERRNCIFNARRATIFNTFMNNSKLIEVPLEGKRFTRIWDNGRRFSKLDRFLVSEHF
                     LLRWGDLYVSALNRKDTDHCPLVLRNKWIDFGPKRTRVFDVWLDHKEADKIISKTWDK
                     SVEGNRADLIFCRKLKATRFALPSKSTFGKIDSESEEYRKEAAIWESRAESSDLEESD
                     RSKWMDVMGKRLKKEAEKRNMMKQKARVKWATDGEENSKFFHAYIRRRTCKNNIHGLN
                     INGKWEEDPGETSHGCNTSFVSLIPKKQDSVELGDYRPISLIGGYYKIIAKLLSNRLR
                     KVVPNLVGDEQTAFLRGKSILDGVLILNEAVDESKRCKAKTFLFKADFSKAFDSLKWK
                     FLFDIMRLMGFGSRWIKWIFSCLRYASISVLVNGSPTKEFKLEKGVRQGDPLSPFLFI
                     LASEGLNMIIKNASNDGLFEGVDIGKDKVRLTHLQYADDTIFIGEWRRRNIHNVMLIL
                     KSFEELSGLELMPLNAVYSGWASHP"
     misc_feature    <1..381
                     /gene="LOC139841079"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,118..120,361..363)
                     /gene="LOC139841079"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    880..1557
                     /gene="LOC139841079"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1323,1456..1458,1462..1467)
                     /gene="LOC139841079"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1320,1462..1464)
                     /gene="LOC139841079"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1321..1323
                     /gene="LOC139841079"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgattatag ttaacgtata tggtccacac aactatataa agaagaaaga gatgtggaat
       61 tcgttagaaa aattactcga gtttgacaac gataattggg tactgtgtgg agatttcaac
      121 gaggttagga atgaagatga acggcgtaat tgtattttca atgctagaag agctacaata
      181 tttaatacat ttatgaacaa ttcgaaactc attgaggtgc cattagaggg taagagattt
      241 actagaattt gggataacgg acgtaggttc agcaaattgg atcggtttct agtatcagaa
      301 cattttttgc ttcggtgggg tgacttatac gtttcagctc ttaatcgcaa ggacaccgat
      361 cactgcccac ttgtattgcg aaataaatgg attgattttg gtcctaagcg caccagggta
      421 ttcgatgtct ggcttgacca taaagaggct gataaaatca tatccaaaac ttgggataaa
      481 tctgtagaag gcaatagggc ggacttgatt ttctgcagga aattgaaagc tactagattt
      541 gctttaccga gtaaatctac ttttggtaaa attgattcag aaagtgagga atacagaaaa
      601 gaagcagcta tatgggaatc gagagctgaa tcttcggatt tagaagagtc tgatcggtca
      661 aagtggatgg acgtgatggg aaaaaggttg aaaaaggaag ctgaaaaacg gaatatgatg
      721 aaacaaaagg cacgggtcaa atgggcaacc gacggggaag aaaattccaa gttttttcat
      781 gcttatatta gaagacgcac ctgcaaaaat aatattcatg gtttgaatat caatggcaaa
      841 tgggaagaag atcctggtga aacatctcat ggatgcaaca cctcatttgt ttcgttaatt
      901 cctaaaaaac aggattcggt ggagctcgga gattatcgcc cgataagttt aataggcgga
      961 tattacaaga ttattgccaa acttctatcc aatcgcctaa gaaaggttgt accaaatctg
     1021 gtgggagacg agcaaacagc atttctaaga ggtaaatcaa ttttagatgg agttttaatt
     1081 cttaacgagg ccgttgatga atcaaaaaga tgcaaggcga agacttttct tttcaaagca
     1141 gatttctcta aagcttttga ctctcttaag tggaagttcc tattcgatat tatgcgtctt
     1201 atgggtttcg ggtcccggtg gatcaaatgg atcttttctt gtttacgata tgcctctata
     1261 tccgttctag tgaatggatc tcctacaaaa gagttcaaat tggaaaaggg agttaggcag
     1321 ggcgacccgc tctcgccttt tctctttata cttgcaagtg aggggttaaa catgattata
     1381 aagaatgcat ccaatgatgg gctgttcgaa ggagtagata tcggcaaaga caaagtccgt
     1441 ctcactcatc ttcaatacgc ggacgatacg atttttattg gtgagtggag aaggagaaat
     1501 attcataatg ttatgcttat tcttaaaagt tttgaagaat tgtctgggtt agaattaatg
     1561 ccgctaaatg ctgtctattc gggttgggcg tctcatcctt ag
//
LOCUS       XM_071831313            1602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841080), mRNA.
ACCESSION   XM_071831313
VERSION     XM_071831313.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139841080"
                     /note="uncharacterized LOC139841080; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841080"
     CDS             1..1602
                     /gene="LOC139841080"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687414.1"
                     /db_xref="GeneID:139841080"
                     /translation="MIIVNVYGPHNYIKKKEMWNSLEKLLEFDNDNWVLCGDFNEVRN
                     EDERCNCIFNARRATIFNTFMNNSKLIEVPLEGKRFTRIWDNGRRFSKLDRFLVSEHF
                     LLRWGDLYVSALNRKDTDHCPLVLRNKWIDFGPKRTRVFDVWLDHKEADKIISKTWDK
                     SVEGNRADLIFCRKLKATRFALPSKSTFGKIDSESEEYRKEAAIWESRAESSDLEESD
                     RSKWMDVMGKRLKKEAEKRNMMKQKARVKWATDGEENSKFFHAYIRRRTCKNNIHGLN
                     INGKWEEDPGETSHGCNTSFVSLIPKKQDSVELGDYRPISLIGGYYKIIAKLLSNRLR
                     KVVPNLVGDEQTAFLRGKSILDGVLILNEAVDESKRCKAKTFLFKVDFSKAFDSLKWK
                     FLFDIMRLMGFGSRWIKWIFSCLRYASISVLVNGSPTKEFKLEKGVRQGDPLSPFLFI
                     LASEGLNMIIKNASNDGLFEGVDIGKDKVRLTHLQYADDTIFIGEWRRRNIHNVMLIL
                     KSFEELSGLELMPLNAVYSGWASHP"
     misc_feature    <1..381
                     /gene="LOC139841080"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,118..120,361..363)
                     /gene="LOC139841080"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    880..1557
                     /gene="LOC139841080"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1323,1456..1458,1462..1467)
                     /gene="LOC139841080"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1320,1462..1464)
                     /gene="LOC139841080"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1321..1323
                     /gene="LOC139841080"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgattatag ttaacgtata tggtccacac aactatataa agaagaaaga gatgtggaat
       61 tcgttagaaa aattactcga gtttgacaac gataattggg tactgtgtgg agatttcaac
      121 gaggttagga atgaagatga acggtgtaat tgtattttca atgctagaag agctacaata
      181 tttaatacat ttatgaacaa ttcgaaactc attgaggtgc cattagaggg taagagattt
      241 actagaattt gggataacgg acgtaggttc agcaaattgg atcggtttct agtatcagaa
      301 cattttttgc ttcggtgggg tgacttatac gtttcagctc ttaatcgcaa ggacaccgat
      361 cactgcccac ttgtattgcg aaataaatgg attgattttg gtcctaagcg caccagggta
      421 ttcgatgtct ggcttgacca taaagaggct gataaaatca tatccaaaac ttgggataaa
      481 tctgtagaag gcaatagggc ggacttgatt ttctgcagga aattgaaagc tactagattt
      541 gctttaccga gtaaatctac ttttggtaaa attgattcag aaagtgagga atacagaaaa
      601 gaagcagcta tatgggaatc gagagctgaa tcttcggatt tagaagagtc tgatcggtca
      661 aagtggatgg acgtgatggg aaaaaggttg aaaaaggaag ctgaaaaacg gaatatgatg
      721 aaacaaaagg cacgggtcaa atgggcaacc gacggggaag aaaattccaa gttttttcat
      781 gcttatatta gaagacgcac ctgcaaaaat aatattcatg gtttgaatat caatggcaaa
      841 tgggaagaag atcctggtga aacatctcat ggatgcaaca cctcatttgt ttcgttaatt
      901 cctaaaaaac aggattcggt ggagctcgga gattatcgcc cgataagttt aataggcgga
      961 tattacaaga ttattgccaa acttctatcc aatcgcctaa gaaaggttgt accaaatctg
     1021 gtgggagacg agcaaacagc gtttctaaga ggtaaatcaa ttttagatgg agttttaatt
     1081 cttaacgagg ccgttgatga atcaaaaaga tgcaaggcga agacttttct tttcaaagta
     1141 gatttctcta aagcttttga ctctcttaag tggaagttcc tattcgatat tatgcgtctt
     1201 atgggtttcg ggtcccggtg gatcaaatgg atcttttctt gtttacgata tgcctctata
     1261 tccgttctag tgaatggatc tcctacaaaa gagttcaaat tggaaaaggg agttaggcag
     1321 ggcgacccgc tctcgccttt tctctttata cttgcaagtg aggggttaaa catgattata
     1381 aagaatgcat ccaatgatgg gctgttcgaa ggagtagata tcggcaaaga caaagtccgt
     1441 ctcactcatc ttcaatacgc ggacgatacg atttttattg gtgagtggag aaggagaaat
     1501 attcataatg ttatgcttat tcttaaaagt tttgaagaat tgtctgggtt agaattaatg
     1561 ccgctaaatg ctgtctattc gggttgggcg tctcatcctt ag
//
LOCUS       XM_071831314            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytosolic sulfotransferase
            13-like (LOC139841081), mRNA.
ACCESSION   XM_071831314
VERSION     XM_071831314.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139841081"
                     /note="cytosolic sulfotransferase 13-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139841081"
     CDS             1..1035
                     /gene="LOC139841081"
                     /codon_start=1
                     /product="cytosolic sulfotransferase 13-like"
                     /protein_id="XP_071687415.1"
                     /db_xref="GeneID:139841081"
                     /translation="MSIPISSQPSPRKSNNEDNQEMANLSLIFDKYKDKLITLPKEKG
                     WISENLYLYQGFWHQSKRRISAETVMAVQDGFKARQTDIYLATLPKSGTTWLKALVFA
                     IVRRNELQTNCKTSCVSTHPLLSSNPHKCVPFVESVILRNTPTYDDQYSSRLFATHIP
                     YTSLPQTILDSGCRVVYLCRNPKDVLVSMFHFANILRDKTRTLMTIEEAFELFSKGVM
                     PLGPYWDHVKGYHKASLEHKHKVMFLTYEGMKMDTMNNVKRLAMFLGYPFTEEEEAKG
                     AVEEIVNLCSFDNLSEVNKVGNLHEGIPNNAFFREGKVGDWSNHLKDEMSQILNQITN
                     EKFLGLDISF"
     misc_feature    4..1017
                     /gene="LOC139841081"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_1;
                     cl21551"
                     /db_xref="CDD:473908"
ORIGIN      
        1 atgtcgattc ctatatcttc tcaaccctct ccaagaaaat ctaacaatga agataatcaa
       61 gaaatggcga atctgtctct cattttcgat aaatacaaag ataaattgat aacgctgcca
      121 aaagagaaag gttggatatc cgaaaatcta tacttgtacc aaggcttttg gcatcagtct
      181 aagcgtcgaa tctcagctga gaccgtgatg gctgtgcaag atggttttaa agctcgtcaa
      241 accgatatct acttagccac attaccaaaa tccgggacaa cttggctcaa ggcgctcgtt
      301 tttgctatag tacgtagaaa tgagttacaa accaactgta aaacaagttg tgtttcaact
      361 caccctctgc ttagttctaa tcctcataaa tgtgtaccct tcgttgaatc cgtaattctt
      421 agaaacacac caacttatga tgatcaatat tcgtcacgtc tctttgcaac acatatacct
      481 tacacttcgt tacctcaaac aattcttgat tctggttgtc gcgtagttta tttatgtagg
      541 aaccctaaag acgttttggt ctctatgttt cactttgcga acatattgag agacaaaacg
      601 cgtactctaa tgacaattga agaggccttc gagttattta gtaaaggggt gatgccatta
      661 gggccatatt gggaccatgt gaaaggttac cataaggcta gtttagaaca caaacacaag
      721 gttatgtttt taacatatga aggtatgaaa atggacacca tgaataatgt taagcgactc
      781 gcaatgttct tgggataccc ttttactgag gaagaagagg ctaaaggtgc ggtggaagaa
      841 attgttaatc tatgtagttt tgacaactta agtgaggtta ataaggttgg aaatttacat
      901 gaaggcatac cgaataacgc gttttttaga gaagggaaag ttggggattg gagtaatcat
      961 ctcaaggatg aaatgagcca gattttaaac caaattacaa atgaaaagtt cctaggtttg
     1021 gatatctctt tctag
//
LOCUS       XM_071831315             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841082), mRNA.
ACCESSION   XM_071831315
VERSION     XM_071831315.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139841082"
                     /note="uncharacterized LOC139841082; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841082"
     CDS             1..498
                     /gene="LOC139841082"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687416.1"
                     /db_xref="GeneID:139841082"
                     /translation="MSSTSSSNEEYLMEVLDIIDNEALESENETESSNKRRYIDREHE
                     AAHLRLITYYFVAAYGDTPDLFDEYLQMSERTCRESLMNFCKCIIDLYKDEYMREPTT
                     NDIKRLYGAHEDIHGLPGMMESIDCMHWEWEKCLVAWKCQFTRGDHKVPTIMLEVVAS
                     YDNWI"
     misc_feature    280..>495
                     /gene="LOC139841082"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcttcaa catcatcgtc taacgaagag tatttaatgg aagtgctcga tataatagac
       61 aacgaggcgt tagaaagtga aaatgagacg gaaagttcaa acaaacgtcg ttacatagac
      121 cgtgaacatg aagccgcaca tttacgtctt attacctact attttgttgc agcttatggt
      181 gatacacccg atctttttga cgagtacttg caaatgtcgg aacgaacatg tcgtgaatcg
      241 ctaatgaact tctgtaagtg tattattgat ttatataaag atgaatatat gcgagagcct
      301 accactaatg atatcaaacg attgtatggg gctcacgaag atattcacgg tttacctgga
      361 atgatggaaa gcatagattg tatgcattgg gagtgggaaa aatgtctcgt tgcatggaaa
      421 tgtcaattta ctcgaggcga tcacaaagtt ccaactatta tgctagaagt cgtagcctca
      481 tatgataact ggatttga
//
LOCUS       XM_071831316            1602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841084), mRNA.
ACCESSION   XM_071831316
VERSION     XM_071831316.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139841084"
                     /note="uncharacterized LOC139841084; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841084"
     CDS             1..1602
                     /gene="LOC139841084"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687417.1"
                     /db_xref="GeneID:139841084"
                     /translation="MIIVNVYGPHNYIKKKEMCNSLEKLLEFDNDNWVLCGDFNEVRN
                     EDERRNCIFNARRATRFNTFINNSKLIEVPLEGKRFTRIWDNGRRFSKLDRFLVSEHF
                     LLRWGDLYVSALNRKDTDHCPLVLRNKWIDFGPKPTRVFDVWLDHKEADKIISETWDK
                     SVEGNRADLIFCRKLKATRFALPSKSTFGKIDSESEEYRKEAAIWESRAESSDLEESD
                     RSKWMDVMGKRLKKEAEKRNMMKQKARVKWATDGEENSKFFHAYIRRRTCKNNIHGLN
                     INGKWEEDPGETSHGCNASFVSLIPKKQDSVELGDYRPISLIGGYYKIIAKLLSNRLR
                     KVVPNLVGDEQTAFLRGKSILDGVLILNEAVDESKRCKAKTFLFKADFSKAFDSLKWK
                     FLFDIMRLMGFGSRWIKWIFSCLRYASISVLVNGSPTKEFKLEKGVRQGDPLSPFLFI
                     LASEGLNIIIKNASNDGLFEGVDIGKDKVRLTHLQYTDDTIFIGEWRRRNIQNVMLIL
                     KSFEELSWLELMPLNAVYSGWASHP"
     misc_feature    <1..381
                     /gene="LOC139841084"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,118..120,361..363)
                     /gene="LOC139841084"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    880..>1545
                     /gene="LOC139841084"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1323,1456..1458,1462..1467)
                     /gene="LOC139841084"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1141..1158,1318..1320,1462..1464)
                     /gene="LOC139841084"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1321..1323
                     /gene="LOC139841084"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgattatag ttaacgtata tggtccacac aactatataa agaagaaaga gatgtgtaat
       61 tcgttagaaa aattactcga gtttgacaac gataattggg tactgtgtgg agatttcaac
      121 gaggttagga atgaagatga acggcgtaat tgtattttca atgctagaag agctacaaga
      181 tttaatacat ttatcaacaa ttcgaaactc attgaggtgc cattagaggg taagagattt
      241 actagaattt gggataacgg acgtaggttc agcaaattgg atcggtttct agtatcagaa
      301 cattttttgc ttcggtgggg tgacttatat gtttcagctc ttaatcgcaa ggacaccgat
      361 cactgcccac ttgtattgcg aaataaatgg attgattttg gtcctaagcc caccagggta
      421 ttcgatgtct ggcttgacca taaagaggct gataaaatca tatccgaaac ttgggataaa
      481 tctgtagaag gcaatagggc ggacttgatt ttctgcagga aattgaaagc tactagattt
      541 gctttaccga gtaaatctac ttttggtaaa attgattcag aaagtgagga atacagaaaa
      601 gaagcagcta tatgggaatc gagagctgaa tcttcggatt tagaagagtc tgatcggtca
      661 aagtggatgg acgtgatggg aaaaaggttg aaaaaggaag ctgaaaaacg gaatatgatg
      721 aaacaaaagg cacgggtcaa atgggcaacc gacggggaag aaaattccaa gttttttcat
      781 gcttatatta gaagacgcac ctgcaaaaat aatattcatg gtttgaatat caatggcaaa
      841 tgggaagaag atcctggtga aacatctcat ggatgcaacg cctcatttgt ttcgttaatt
      901 cctaaaaaac aggattcagt ggagctcgga gattatcgcc cgataagttt aataggcgga
      961 tattacaaga ttattgccaa acttctatcc aatcgcctaa gaaaggttgt accaaatctg
     1021 gtgggagacg agcaaacagc gtttctaaga ggtaaatcga ttttagatgg agttttaatt
     1081 cttaacgagg ccgttgatga atcaaaaaga tgcaaggcga agacttttct tttcaaagca
     1141 gatttctcta aagcttttga ctctcttaag tggaagttcc tattcgatat tatgcgtctt
     1201 atgggtttcg ggtcccggtg gatcaaatgg atcttttctt gtttacgata tgcctctata
     1261 tccgttctag tgaatggatc tcctacaaaa gagttcaaat tggaaaaggg agttaggcag
     1321 ggcgacccgc tctcgccttt tctctttata cttgcaagtg aggggttaaa cataattata
     1381 aagaatgcat ccaatgatgg gctgttcgaa ggagtagata tcggcaaaga caaagtccgt
     1441 ctcactcatc ttcaatacac ggacgatacg atttttattg gtgagtggag aaggagaaat
     1501 attcagaatg ttatgcttat tcttaaaagt tttgaagaat tgtcttggtt agaattaatg
     1561 ccgctaaatg ctgtctattc gggttgggcg tctcatcctt ag
//
LOCUS       XM_071831318             810 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841085), mRNA.
ACCESSION   XM_071831318
VERSION     XM_071831318.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..810
                     /gene="LOC139841085"
                     /note="uncharacterized LOC139841085; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841085"
     CDS             1..810
                     /gene="LOC139841085"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687419.1"
                     /db_xref="GeneID:139841085"
                     /translation="MGFLMISLTSWNIKGLNRTPKQNEVVEVVSGNKLCICAILESHV
                     SISKLNSICGVVFPSWNWTSNNSVCSRGTRIIIGWDPGIVNLMVIALSDQAIHCKVRT
                     SNGFVGDSPGVVMGDFNASLNVGDASGGPAKSTIAMHEFKECMDNLCMSDVNYSGLQI
                     TWNQRPNADTGILKKIDRILTNDRFIDIYTDAFEIFQPYRISDHAPAVLKIPIVHVSK
                     PKPFKFSNFVTEQNDFLDTVAAGWNVDVHGYSMFKVVKKLRALKKSMRKLM"
     misc_feature    22..633
                     /gene="LOC139841085"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(34..36,121..123,349..351,355..357,529..531,607..612)
                     /gene="LOC139841085"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(121..123,607..609)
                     /gene="LOC139841085"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atggggtttc taatgattag tctcacatcc tggaatatta agggtttgaa ccgcacccct
       61 aaacaaaatg aagttgtcga agtcgtctct ggtaacaagt tatgtatttg tgcgattctt
      121 gaatctcatg tttctatttc taaactaaat agtatttgtg gagttgtgtt tccttcatgg
      181 aactggacat caaataatag tgtatgcagt cgtggtactc gtattattat cggttgggac
      241 ccgggtattg ttaatctcat ggttatcgct ttatcagatc aagctattca ctgcaaagtg
      301 cgaacaagca atgggtttgt tggagatagt cccggggttg taatgggaga ttttaatgct
      361 tctttaaatg tgggagatgc atctggtggg cctgcaaaga gcactatagc tatgcacgag
      421 ttcaaggaat gtatggacaa cctttgcatg tctgatgtta actattctgg tttacagatt
      481 acttggaacc agaggcctaa tgcggatact ggaattttaa aaaagataga cagaattctt
      541 actaatgata gattcataga catttataca gatgcgtttg aaattttcca gccctacagg
      601 atatcagatc atgcccctgc ggttttgaaa attccaattg ttcatgtaag caaaccaaaa
      661 ccattcaagt ttagtaactt tgtgactgag cagaatgact ttttggacac agttgcagcg
      721 ggttggaatg tagatgtcca tgggtactct atgtttaaag tggttaagaa actgcgcgcg
      781 cttaagaaat caatgcgtaa gttgatgtag
//
LOCUS       XM_071831319            1135 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841086), mRNA.
ACCESSION   XM_071831319
VERSION     XM_071831319.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1135
                     /gene="LOC139841086"
                     /note="uncharacterized LOC139841086; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841086"
     CDS             124..1125
                     /gene="LOC139841086"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687420.1"
                     /db_xref="GeneID:139841086"
                     /translation="MGKLLKKQRFCPIEAKDWREVKRLCGALLMEDIRGKFSLPEREN
                     VDRVMFLILGDKYRARKYKVKDKLFKSVIEKLKLRDADNIGIDHAQEIHYTEEQILEG
                     LDLVYIPPNIIEYQWNKYKDYLRPSELKKFSEQGKKARGEKLHTHTTGARSHARIRHE
                     FMLKNSREPCPFEFFDIAYKTKEGTYVEDISKDFMDMANKEVKKKILNLDESESVDSH
                     KRSTIEREVVMELIGPDKPGRARFHGKGVTKSQVTDLSYDLRRIRGESSTNFNVGTLL
                     VQLESQRQQMESQNKRIEFQNQKIESQDKQMTCMQHTIDDFRGELQLFRRVFQDSYC"
     misc_feature    463..867
                     /gene="LOC139841086"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
ORIGIN      
        1 ttaggaaaca aactatgacg acaaaagatg tagttaagct aaaaaacggg tgaaaaggtg
       61 ttggttcatc ttaatggatt tgatcagcca attaggccag cagggtcact atacactaga
      121 tacatgggaa aacttttaaa aaaacaacgg ttttgcccta ttgaggctaa agattggcgt
      181 gaagttaaaa ggttatgtgg tgctttgctt atggaagaca ttcgggggaa attctcatta
      241 cccgagagag agaatgttga tagagttatg tttttaatac tcggtgataa atatagggct
      301 cgaaagtata aagtgaaaga taagttgttc aagtcagtca tagagaaatt gaaactaaga
      361 gatgctgata atatcgggat tgatcatgca caagagatac attacactga agagcaaatt
      421 cttgaagggc ttgacttggt atacatacct cccaacatta ttgaatacca gtggaacaaa
      481 tataaggatt atcttagacc atccgagtta aagaaatttt ctgaacaagg gaaaaaggca
      541 agaggcgaga aacttcatac tcatacaact ggtgctcgta gccatgctcg aataagacac
      601 gaatttatgt tgaaaaacag tagagaaccc tgcccctttg agttttttga tattgcttac
      661 aaaactaaag aaggaacata tgttgaagac atatctaaag atttcatgga tatggcaaat
      721 aaggaagtga agaaaaagat tttaaacctt gatgagtcag agagtgttga ttctcacaag
      781 aggtcaacaa ttgagagaga agttgtaatg gagcttatcg gtccagataa gcctggaagg
      841 gctcgatttc acggtaaagg agtaacaaaa tcacaagtaa cggatcttag ttacgaccta
      901 agaagaatta gaggagaaag ctctacaaat tttaacgttg gaacattatt agtgcaactc
      961 gaatctcaaa gacaacaaat ggaatctcag aacaagcgaa tagagtttca aaatcagaaa
     1021 atcgagtctc aagacaaaca aatgacgtgt atgcagcata ctattgatga ttttagagga
     1081 gagctccaat tatttcgaag agtatttcaa gattcctatt gctgaagtga aaata
//
LOCUS       XM_071831320             852 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841087), mRNA.
ACCESSION   XM_071831320
VERSION     XM_071831320.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..852
                     /gene="LOC139841087"
                     /note="uncharacterized LOC139841087; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841087"
     CDS             1..852
                     /gene="LOC139841087"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687421.1"
                     /db_xref="GeneID:139841087"
                     /translation="MKIPSHLIYYEGKDDPDDFLSIFEGAARMAKWDIPVACHAFSYM
                     LKGDVRVWFDSLPKDSVASFDDLKRQFRSKFSQQKRHKKNHVAAHGIKQKDSEGSRAF
                     LIRYTNETQKIPNLPESQRISGLLYGSRVRPLIEHLSRDLPSTYEALLEKAYIWLDAK
                     ETAGNFVLDDAPMNRRKEKSERTDDKHGRKEDKGRLHPYRRETEAVILGALIKTPKEI
                     LATEKAANKFKAPGKMSNRGRNRDMTKFCDFHNDFGHDTDECFNLKTAIEEAIKSGKL
                     SHLIKGI"
     misc_feature    121..357
                     /gene="LOC139841087"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atgaaaatcc cctcacacct aatttactac gaaggaaagg acgacccgga tgatttcctt
       61 agtatattcg agggtgcagc acgaatggcc aaatgggaca tacccgtagc atgtcacgca
      121 ttctcttaca tgttaaaggg ggatgtcagg gtatggtttg actccctacc aaaagactct
      181 gtagctagct tcgatgacct aaaacggcaa tttaggtcta agtttagtca gcaaaagcga
      241 cacaaaaaga atcatgtggc cgctcatgga ataaagcaga aggatagcga aggttctaga
      301 gccttcctca ttaggtatac caacgaaact caaaaaattc ccaacctacc agaatcccaa
      361 agaatatctg ggttgcttta cggatctagg gtcagacctc tcattgaaca ccttagccga
      421 gacctaccaa gcacttatga agctttgtta gaaaaggcat atatatggtt agatgctaag
      481 gaaacagcag gtaacttcgt cctagacgat gctcccatga ataggcgaaa ggagaaatca
      541 gaaagaacag atgataaaca tggtaggaaa gaggataaag ggagattaca cccttaccga
      601 agagaaaccg aagctgtgat cctgggggcg ttaataaaaa cccccaagga aatcctagca
      661 acagaaaaag cagccaacaa gttcaaagcc cctggaaaga tgtccaacag ggggagaaat
      721 agagacatga ctaagttttg tgacttccac aatgattttg ggcacgatac ggatgaatgc
      781 ttcaacctca aaacagccat tgaggaggct attaagtcgg gcaaattgtc ccacctcata
      841 aaaggaatct ga
//
LOCUS       XM_071831321             942 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841088), mRNA.
ACCESSION   XM_071831321
VERSION     XM_071831321.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..942
                     /gene="LOC139841088"
                     /note="uncharacterized LOC139841088; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841088"
     CDS             1..942
                     /gene="LOC139841088"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687422.1"
                     /db_xref="GeneID:139841088"
                     /translation="MKEYIAKLPTLTSPEEGETLFIYLAASKECISTVLVTERERTQV
                     PIYFISRVLQGAELNYPELEKLTLALVHTARKLQRYFQAHQIVVLTNKPIRHVLSKPE
                     KSGRMAKWGIKLGEHDIEFRVRHAIKGQVLADFIAETYNVNEEDTKNSTQVITLKVEN
                     EEWKLYTDGASSSDGSGAGLMLVNPEGKEFTYALRFEFATTKNEAEYEALLAGLRMAK
                     ELKILHLRAFVNSQLVSNQIKGTFEAKQPTIQQYLSKAKELIESFKSFEIEHVRRSQN
                     KKADVLSKLASLTFEHLAKEVLVEVLEKKSILEEEVC"
     misc_feature    49..348
                     /gene="LOC139841088"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    487..861
                     /gene="LOC139841088"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(502..513,601..609,616..618,688..690,808..810,
                     850..852)
                     /gene="LOC139841088"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgaaggagt acatcgccaa actccccacc ttaacctcac ccgaagaagg agaaacactc
       61 ttcatatact tggctgcttc gaaagaatgc attagcacag tattggttac tgaacgagag
      121 agaacgcaag tgccaatata cttcattagt cgagtacttc aaggagcaga gctgaattat
      181 ccagaacttg agaaactcac tctagcactc gtccatacag ctaggaaact ccaaagatac
      241 ttccaagcac atcaaatagt ggtacttacc aacaaaccaa tcaggcatgt actctcaaaa
      301 cctgaaaaat cggggagaat ggccaaatgg ggcattaagt taggggagca tgacatcgag
      361 ttccgggtca ggcatgcaat caaaggacaa gttctagcag atttcatcgc cgaaacatat
      421 aatgttaatg aagaagacac gaagaactca acccaagtta ttaccctaaa ggtcgaaaat
      481 gaagaatgga agttgtacac cgatggtgcg tcaagctctg atggatcagg tgctggtcta
      541 atgttggtaa atcccgaagg aaaagagttc acttatgcac ttcgtttcga atttgcaaca
      601 accaaaaacg aagcagagta cgaagctcta ctagcaggat tgagaatggc taaggaatta
      661 aaaatccttc atctccgagc cttcgtcaac tcacaactag tgtctaacca gatcaagggc
      721 actttcgaag caaaacaacc caccatccaa cagtacttgt caaaggcaaa agaactaatt
      781 gaaagcttta aaagttttga aatcgaacac gtccgaagaa gtcaaaataa gaaggcagac
      841 gtactaagta aacttgcttc gctgacattt gagcatcttg caaaggaagt cttggtggag
      901 gtactagaaa agaaatcaat cttagaagaa gaagtttgtt ga
//
LOCUS       XM_071831322             702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841090), mRNA.
ACCESSION   XM_071831322
VERSION     XM_071831322.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139841090"
                     /note="uncharacterized LOC139841090; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841090"
     CDS             1..702
                     /gene="LOC139841090"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687423.1"
                     /db_xref="GeneID:139841090"
                     /translation="MAKKGYVEQVSTAFLKKECDGILKKCNLPPKMGDPGPFLIPSNV
                     NGSEMLTSLADSGAIINFMPYFVYKRLGLGDLSPTTMGVKLIDQSINSSVGIDEDLII
                     KVGDMEFPIDFVIVDIKEDPVVPLVLGRPFLATAGSFFDFRTEKLTLQDKGKCMSIRT
                     KRVKAPLIPLTTPQIVASVQCITSTRQIGSPTKGSWVLTKGIQGKTKDQNYITDKTMR
                     KLFGRVHRASSKKDV"
     misc_feature    157..402
                     /gene="LOC139841090"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(163..165,169..171,175..177,247..255,379..381)
                     /gene="LOC139841090"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    163..171
                     /gene="LOC139841090"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    163..165
                     /gene="LOC139841090"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(247..258,268..279)
                     /gene="LOC139841090"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggccaaaa agggatatgt tgaacaagtg tccaccgctt tcttaaaaaa ggagtgtgat
       61 ggcattttaa agaaatgtaa cctaccaccg aaaatgggtg atcccggacc tttccttata
      121 ccaagtaatg tgaatgggtc ggagatgctt acatctttag ccgactcagg ggcgattatc
      181 aacttcatgc cctacttcgt ttacaaaagg ttaggcctag gtgatctttc acctaccaca
      241 atgggagtta aactaattga tcaatcaatt aactctagtg tgggtattga cgaggattta
      301 attattaagg ttggggacat ggaattcccc attgactttg ttattgttga tataaaggaa
      361 gacccggttg tacctcttgt tttgggaaga ccattcttag caactgcggg ttctttcttc
      421 gattttagaa ccgagaaact gacccttcag gataaaggga agtgcatgag cataagaaca
      481 aaacgtgtta aggcaccatt aataccattg actacaccac aaattgttgc tagtgtgcaa
      541 tgcatcacaa gcacacggca aattggttca ccaacaaaag gtagttgggt tttgaccaag
      601 ggaattcaag gtaaaaccaa ggatcaaaac tacattactg acaagaccat gagaaaatta
      661 tttgggcggg tgcatagggc ttcatccaag aaggatgtgt ag
//
LOCUS       XM_071831323             513 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841091), mRNA.
ACCESSION   XM_071831323
VERSION     XM_071831323.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..513
                     /gene="LOC139841091"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139841091"
     CDS             1..513
                     /gene="LOC139841091"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687424.1"
                     /db_xref="GeneID:139841091"
                     /translation="MEPEGRGRRSTTSITRRFFDDPLACESWELTLHIFYYMWTTWSK
                     FSTAFLQQSITSLHREFSMTDLELMNYFLGIPVTRNSSGMFLSQKKYDAYILECADMT
                     GCQSSMTLVETCSKVLATGPFVADPNLYRSLACALQYITFTRLDIAYVVQQICLFMHD
                     PREQHFFALK"
     misc_feature    <169..336
                     /gene="LOC139841091"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atggaacccg agggtcgtgg gcgcagatcc actacatcca tcacccgcag attttttgat
       61 gatccattag cctgcgaatc ttgggagctg acactgcata tcttttacta tatgtggacg
      121 acatggtcaa aattctcgac agcttttctt cagcagtcca ttacatcttt gcatcgtgag
      181 ttctctatga ctgatcttga actaatgaac tactttttgg gcattccagt tacacgtaac
      241 tcttctggga tgttcttgtc tcagaagaag tatgacgcat acattcttga gtgtgctgat
      301 atgactggct gtcaatcgag catgacccta gtcgaaacct gctccaaagt tttagccacg
      361 ggtccctttg ttgcagaccc gaatctgtat cgcagccttg cttgtgctct tcagtacatt
      421 acattcacac gcctagatat tgcttatgtc gttcagcaaa tatgtctttt tatgcatgat
      481 ccacgagagc aacacttttt cgccctaaag tag
//
LOCUS       XM_071831324            1032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytosolic sulfotransferase
            13-like (LOC139841092), mRNA.
ACCESSION   XM_071831324
VERSION     XM_071831324.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1032
                     /gene="LOC139841092"
                     /note="cytosolic sulfotransferase 13-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139841092"
     CDS             1..1032
                     /gene="LOC139841092"
                     /codon_start=1
                     /product="cytosolic sulfotransferase 13-like"
                     /protein_id="XP_071687425.1"
                     /db_xref="GeneID:139841092"
                     /translation="MSSATPSQSSERCLESLKVANLSLILDRYMDTYNTFPKEKFYMN
                     EDLYLYQGFWYRSGGLVLHGFISIGTVMAAQETFQANPYDIYLATLPKSGTTWLKALA
                     FAIVNRTKYKTNSLSTHPLLISNPHDCLPFIEHEVLRTRPTYADLSDAHLFATHIPYP
                     SLPKSIIDSGCRVVIYICRNPKGVLISWFHFINKLIEKSYGSLIIEEVFERFCKGMTP
                     CGPYWDHVKSYYKASLEHPTRIMFLTYENMINDSENNVKRLAEFLGYPFTEEEKANGV
                     LQEIVKLCSFENLSEVNKNGKTCGGVPKNAFFRQGKVGDWSNYLTDEMSNVIDQITLE
                     KFNGFDITF"
     misc_feature    82..1014
                     /gene="LOC139841092"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_1;
                     cl21551"
                     /db_xref="CDD:473908"
ORIGIN      
        1 atgtcaagcg ctacaccttc tcaaagtagt gaacgttgtc tagaatctct caaagttgcc
       61 aatttgtctc taatccttga tagatacatg gatacataca acacttttcc aaaggagaaa
      121 ttttatatga atgaagactt gtacctttac caaggttttt ggtatcgttc aggcggattg
      181 gtgttacacg gatttatatc aattggaacc gtgatggccg cacaagaaac tttccaagct
      241 aacccatatg atatttactt agccacacta ccaaaatcag gcaccacatg gcttaaggcc
      301 cttgcatttg ctattgtgaa tcgaaccaag tacaaaacca actctctttc aactcacccc
      361 ttactcatct ctaatccaca tgattgttta cctttcattg aacatgaagt actacgaaca
      421 aggcctactt acgccgattt gagcgatgca catctctttg ccactcatat accttaccct
      481 tcattgccta aatccattat cgattctggt tgtcgcgtag ttatttatat ctgtagaaac
      541 cctaaaggtg ttttaatttc ctggtttcac tttattaata agttgataga aaagtcttat
      601 ggttcactta taattgaaga ggtgtttgag aggttttgca aaggtatgac accgtgcggg
      661 ccttactggg atcatgtgaa aagttactac aaagcaagtt tagaacatcc aactaggatt
      721 atgtttttaa catatgagaa catgataaat gattctgaaa ataatgtaaa acgtctagca
      781 gagttcttgg gctatccttt tacagaggaa gaaaaagcta atggtgtgtt gcaagagatt
      841 gtgaagctat gcagctttga aaatctaagt gaggttaaca agaatggaaa gacatgtggg
      901 ggcgtaccta aaaatgcttt ttttagacag ggaaaagttg gagattggag taactatctc
      961 accgatgaaa tgagtaatgt tatagaccaa attaccctcg aaaagtttaa tggttttgat
     1021 atcacattct aa
//
LOCUS       XM_071831326             519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841093), mRNA.
ACCESSION   XM_071831326
VERSION     XM_071831326.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..519
                     /gene="LOC139841093"
                     /note="uncharacterized LOC139841093; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841093"
     CDS             1..519
                     /gene="LOC139841093"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687427.1"
                     /db_xref="GeneID:139841093"
                     /translation="MHTDGACGPEGAGAGIVLKSPEGEEYTFALRFSFPVTNNEAEYE
                     ALLSGMRVAKYLEIRELSVYVDSQLVANQFNGIFEAHNESMQKYLKLLQELAADALSK
                     LAALTFSHFKKEIWVVEVKVKSIEEDSVSAAVEEEEQSWMTPIIEFLTKGTLPIDSSK
                     ARKIKIKAPMYL"
     misc_feature    1..315
                     /gene="LOC139841093"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(10..21,109..117,124..126,196..198,304..306)
                     /gene="LOC139841093"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgcacacag acggggcttg tggcccagaa ggcgcagggg caggaatagt cctaaaaagt
       61 ccagaaggag aggaatatac cttcgcactg cgattcagct tccctgtcac aaataatgaa
      121 gctgaatatg aagcgttgtt atctgggatg cgggtagcaa aatatttgga gattagagaa
      181 ctgtcagtat atgttgattc gcagttagtt gcaaatcaat ttaacggaat attcgaagca
      241 cacaatgaat caatgcaaaa atacttaaag cttctgcaag agctagcagc ggatgcgcta
      301 agtaagttag ctgcattaac attcagtcat tttaagaaag aaatttgggt tgtggaagtt
      361 aaagtaaaat ctattgaaga agacagtgtt tcggctgcag ttgaagaaga ggagcaaagt
      421 tggatgacac caataataga atttctaacc aaaggtacat tgccgataga ttcaagtaaa
      481 gcaagaaaga ttaagataaa agcaccaatg tatctgtaa
//
LOCUS       XM_071831327             519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841094), mRNA.
ACCESSION   XM_071831327
VERSION     XM_071831327.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..519
                     /gene="LOC139841094"
                     /note="uncharacterized LOC139841094; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841094"
     CDS             1..519
                     /gene="LOC139841094"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687428.1"
                     /db_xref="GeneID:139841094"
                     /translation="MHTDGACGPEGAGAGIVLKSPEGEEYTFALRFSFPVTNNEAEYE
                     ALLSGMRVAKYLEIRELSVYVDSQLVANQFNGIFEAHNESMQKYLKLLQELAADALSK
                     LAALTFSHFKKEIWVVEVKVKSIEEDSVSAAVEEEEQSWMTPIIEFLTKGTLPIDSSK
                     ARKIKIKAPMYL"
     misc_feature    1..315
                     /gene="LOC139841094"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(10..21,109..117,124..126,196..198,304..306)
                     /gene="LOC139841094"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgcacacag acggggcttg tggcccagaa ggcgcagggg caggaatagt cctaaaaagt
       61 ccagaaggag aggaatatac cttcgcactg cgattcagct tccctgtcac aaataatgaa
      121 gctgaatatg aagcgttgtt atctgggatg cgggtagcaa aatatttgga gattagagaa
      181 ctgtcagtat atgttgattc gcagttagtt gcaaatcaat ttaacggaat attcgaagca
      241 cacaatgaat caatgcaaaa atacttaaag cttctgcaag agctagcagc ggatgcgcta
      301 agtaagttag ctgcattaac attcagtcat tttaagaaag aaatttgggt tgtggaagtt
      361 aaagtaaaat ctattgaaga agacagtgtt tcggctgcag ttgaagaaga ggagcaaagt
      421 tggatgacac caataataga atttctaacc aaaggtacat tgccgataga ttcaagtaaa
      481 gcaagaaaga ttaagataaa agcaccaatg tatctgtaa
//
LOCUS       XM_071831328            1017 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytosolic sulfotransferase
            13-like (LOC139841095), mRNA.
ACCESSION   XM_071831328
VERSION     XM_071831328.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1017
                     /gene="LOC139841095"
                     /note="cytosolic sulfotransferase 13-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139841095"
     CDS             1..1017
                     /gene="LOC139841095"
                     /codon_start=1
                     /product="cytosolic sulfotransferase 13-like"
                     /protein_id="XP_071687429.1"
                     /db_xref="GeneID:139841095"
                     /translation="MSIPTPFHTEPSLDDPKVEKANLTLLQDKYKDRYTTFSKEKLYA
                     NEDVYLYQGFWYRSKGLVSLPTLLAAQETFQANPNDIYLATLPKSGTTWLKALTFAIV
                     NRTKYKNNSLLAHPLLISNPHDCLPHIENEVLRTRPTYVDLSSPRLFATHIPYPLLPR
                     STIDYGCRIVYMCRNPKDVLISLFHFVNKLVEKYYGQLTIEEVFERFSKGITPCGPYW
                     DHVKSYYEASLEHPTRILFLTYENMMNNTENNVKHLAEFLGYPFTKDEQDNGVVQEIV
                     KLCSFENLSEVNKHGNVRDGPEKNTFFRKGKVGDSSNYLTSEMSAILDQITKEKFHGL
                     NISF"
     misc_feature    25..999
                     /gene="LOC139841095"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_1;
                     cl21551"
                     /db_xref="CDD:473908"
ORIGIN      
        1 atgtcaatcc caactccctt ccatactgaa ccttctttag atgatcctaa agtcgaaaag
       61 gccaatttaa ctctacttca agataaatat aaagatagat acacaacttt ttcgaaggag
      121 aagctatatg cgaatgaaga tgtatacctt taccaaggct tttggtatcg ttcaaaaggc
      181 ttagtatcac ttccaacact attggccgca caagaaactt tccaagctaa tccaaacgat
      241 atttacttgg ccacacttcc aaaatcaggc acaacatggc tcaaggccct tacattcgct
      301 attgtgaatc gaaccaagta caaaaacaac tctcttttag ctcatccctt actcatctct
      361 aatccacatg attgcttgcc tcatattgaa aatgaagtat taagaacaag gcctacttat
      421 gtcgatttga gctctccgcg tctctttgcc actcatattc cttacccttt attgcctcgg
      481 tccactattg attatggttg tcgcatagtt tatatgtgta gaaaccctaa agatgtctta
      541 atttcattgt ttcactttgt taataagttg gtagaaaaat attatggtca acttacaatt
      601 gaggaggtgt ttgagagatt tagcaaaggt atcacaccat gcggacctta ttgggatcat
      661 gtgaaaagtt actacgaagc tagtttagaa catccgacta ggattctatt tttaacatac
      721 gagaacatga tgaacaatac agaaaataac gtgaaacatc tagcggagtt cttggggtat
      781 ccttttacga aggacgaaca agataatggc gtggtgcaag agattgtgaa gctatgtagt
      841 tttgaaaact taagtgaggt taacaagcat gggaatgttc gcgacggccc agaaaagaac
      901 actttcttta gaaagggaaa agttggagat tcgagtaact atctcacaag tgaaatgagt
      961 gcaattttag atcaaattac caaagaaaaa tttcatggtt tgaatatctc attctaa
//
LOCUS       XM_071831329            1356 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841096), mRNA.
ACCESSION   XM_071831329
VERSION     XM_071831329.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1356
                     /gene="LOC139841096"
                     /note="uncharacterized LOC139841096; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841096"
     CDS             1..1356
                     /gene="LOC139841096"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687430.1"
                     /db_xref="GeneID:139841096"
                     /translation="MGIFLVFFPEEKHFNSSTPSSTTSSFKSPTINSILKRTNSSHIF
                     TRTQSTISICALLIFVTLILFTFSSFEPNNDFITTHRRFLTQKDHGFHTQTKPSSNLP
                     ALQGLGTLYTRGTSLMKQLVICHVTEHVTKKELKLFMKTFHRSGLASKSDLLFIFDWI
                     KTIDSFDDIIREENDVFLKVVEKYKQELDNGSKVVDFLGSFDPTLFVKPGSEPDKGEP
                     IWGRRAKGYNSSFGNGDLTELTRMNYGSVVGFGIGELDPENSLSGFMDHASMSLRRWA
                     SYPMILGRVRRKFKKIILVDVKEVVLLGDPFSRVKTHSPESIFLFSKSSRRSNKAHRK
                     VINPAVVFGGERGVRRLSAAILTEIVRSTTRQHQSKKNSITESGILSQLVGNDILQKS
                     INFVVSTESIPELPSSHGGMEIANQTVLIRRGNSNLDIGEVIMKHICSFSVDASVYTD
                     C"
ORIGIN      
        1 atgggtatat ttttagtatt tttcccagaa gaaaaacact ttaattcttc caccccatca
       61 tcaacaacat cgtcatttaa atcaccaaca ataaattcca tattaaaacg tacaaattca
      121 agtcacattt tcaccaggac acaatccaca atttccattt gtgcactttt aatatttgta
      181 acacttattt tattcacatt ttcatcattt gaaccaaaca atgatttcat cacaacacat
      241 agaagatttc tcacacagaa agaccatggt tttcacacac aaacaaaacc cagttcaaat
      301 ttaccagctt tacaagggtt aggaactttg tacacacgtg gcactagtct catgaagcag
      361 cttgtcatat gtcacgtgac tgagcacgtg accaagaaag aactgaaatt gttcatgaag
      421 acgtttcatc gatcagggtt agcttcaaaa tcggatcttt tgtttatatt tgattggatt
      481 aaaaccatag attcatttga tgatataatt cgtgaagaaa atgatgtctt tttgaaagtt
      541 gttgaaaaat ataagcaaga attggataat gggagtaaag ttgttgactt tctggggagt
      601 tttgacccga ccctgtttgt taaacccggt tcggaaccgg ataaaggaga acccatctgg
      661 ggtcggagag ctaaagggta taattcgagt tttggtaatg gtgatttgac tgagttgaca
      721 cggatgaatt acgggtcagt ggttggtttt ggaattggtg aacttgaccc ggaaaattca
      781 ttatccgggt ttatggatca tgcttcaatg agtttaagaa gatgggcttc ttacccgatg
      841 atcttgggtc gggttcgccg gaaatttaag aaaataattc ttgttgatgt taaagaagtt
      901 gtactactcg gcgacccatt tagccgagtc aagactcact caccggagtc aatcttttta
      961 ttttcaaaaa gcagccggag aagtaacaag gcccacagga aagttatcaa tccggcggtg
     1021 gttttcggcg gcgaacgggg tgtccgacgg ttatccgccg ccatattgac ggagattgtc
     1081 cggtctacta cacgtcagca ccaaagcaaa aagaattcaa ttaccgagtc gggtatactg
     1141 agtcaactcg tgggtaatga tattttgcaa aaaagtataa attttgtggt gtcaaccgag
     1201 tcaataccgg aactaccgag ttcacacggt ggaatggaaa tagcaaatca gacagtttta
     1261 atacggcgtg gaaatagtaa tttagatatt ggtgaagtaa ttatgaagca tatttgttca
     1321 ttttcggtag acgcctcggt ctacacggat tgttga
//
LOCUS       XM_071831330             615 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841097), mRNA.
ACCESSION   XM_071831330
VERSION     XM_071831330.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..615
                     /gene="LOC139841097"
                     /note="uncharacterized LOC139841097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841097"
     CDS             1..615
                     /gene="LOC139841097"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687431.1"
                     /db_xref="GeneID:139841097"
                     /translation="MAPKPENAKKENWTQEMVLELFGWEGSAHDTRVFMHSIQNKSMN
                     FPQPPEGRYYLVDKGYPDRKGYLVPYPKTRYHQSQFQKEPPNNMQEAFNRSHSSLRSY
                     IERSFGILKKRFHILSEMPRFSVQTQIDVITATFALHNYIRTNSQEDIIFAIIDEHPN
                     YIPRDELNDVNNHDIRTEGLFEGRRNEMKQVRNNIATSIWNDRH"
     misc_feature    <67..420
                     /gene="LOC139841097"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 atggctccta aaccagagaa tgctaagaaa gaaaactgga cacaagaaat ggttttggaa
       61 ttgttcggat gggagggatc agcacatgac acacgtgttt ttatgcactc aatccaaaat
      121 aagtcaatga acttcccgca accacctgaa ggtagatatt atttggttga taaaggatac
      181 ccggacagaa agggatacct tgttccatat ccaaagacaa gataccatca atctcaattt
      241 caaaaagagc ccccaaataa tatgcaagaa gcattcaacc gttcacattc atctctacga
      301 agttatattg agaggtcatt cggaattttg aagaaacggt ttcacatact tagtgaaatg
      361 ccaaggttta gtgtgcaaac acaaattgat gttatcacgg ctacatttgc attgcataac
      421 tacattcgta ctaatagtca agaagatatc atatttgcaa taatcgatga acatccaaat
      481 tacataccac gagatgagct taatgatgtt aataatcatg acatacgcac cgaaggacta
      541 tttgaaggaa gaaggaatga gatgaaacaa gttcgtaaca atattgctac ttcaatatgg
      601 aatgatcgtc attaa
//
LOCUS       XM_071831331            1434 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841098), mRNA.
ACCESSION   XM_071831331
VERSION     XM_071831331.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1434
                     /gene="LOC139841098"
                     /note="uncharacterized LOC139841098; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841098"
     CDS             1..1434
                     /gene="LOC139841098"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687432.1"
                     /db_xref="GeneID:139841098"
                     /translation="MIQLLMGLSRHTTSIQQEMFIQRAFTMYTIYIDDDMCFNRSLSD
                     NETERPSPMHIRRGIRERKPTGVLRSPFTTPGYRKPIEKLSKDVIEKVESMNAVNLGT
                     EEDQGQQQINEDVVPMDTDAATEVSVDKQPVKVSKRKRKEQDWATEEEIWGMIDRFIN
                     DQGTLQPPPPNAWRDGRKHAGPAKDPKTMIESKQETRCMFIFQNEQFIFINQDFWLRL
                     LALRHSGYLDNLHIDGWATFLLRYRQRFLPRASQVYATPEFPAEVLKASSRWTIMPLG
                     FMNMFERFKTYFDNTQKEVGTQEESTTDGEGIIGQNPPDYMYLIGLGDGSVDLYPSWA
                     DCDQVLIPLHFWKEEHFLLLQLKLEEMKVFVYDSLPGHVSEKKLDEVFKILGDNLPVY
                     LKAIDYFNKTQDSQIVGYYENKESVELMIEPGPRIIYGREEVDNIGDAKKAAEQYRNR
                     MARTFFRARFDTQEPPPPTPPVEIQVD"
ORIGIN      
        1 atgatccagt tgttgatggg tctgagcaga cacaccacaa gcattcaaca ggagatgttc
       61 atacagaggg ccttcacgat gtacacaatt tacatcgatg atgatatgtg tttcaatcga
      121 tctttgtctg ataatgagac tgaaaggcca tctccaatgc acattcgacg tggaatcaga
      181 gaaagaaagc caactggtgt attaaggtcc ccattcacaa cacctgggta cagaaaaccc
      241 attgagaagt tgtcaaaaga tgtgattgag aaagtggaaa gcatgaatgc tgtaaactta
      301 gggactgaag aagatcaagg tcaacaacaa attaatgagg atgtggtacc catggacaca
      361 gatgcagcaa cagaggttag tgttgataag cagcctgtta aagtgagtaa gagaaaaaga
      421 aaggaacaag actgggctac tgaggaagaa atttggggga tgattgacag gtttataaat
      481 gatcaaggaa ctctccaacc accgccacct aatgcctgga gagatggtag aaagcatgca
      541 ggtccagcaa aagatccaaa gacaatgatt gagagcaagc aagagacgcg ttgcatgttc
      601 atctttcaaa atgagcaatt catttttata aatcaagact tttggcttcg attactggca
      661 ttaaggcatt ctggttattt ggataacttg cacattgacg gctgggctac atttctgttg
      721 agatatcgtc agagatttct cccccgagcc agtcaagttt atgccactcc tgagtttcca
      781 gctgaggtgc ttaaggctag ttctagatgg actattatgc cactgggatt catgaacatg
      841 tttgagaggt tcaaaactta ttttgacaat actcagaagg aggtgggcac acaggaggaa
      901 tctacaacag atggagaggg aattattggc caaaatcctc cagattacat gtacttaatt
      961 ggacttggag acggcagtgt tgacctatat ccatcttggg ctgactgtga tcaggtcttg
     1021 atcccattac atttttggaa agaagaacat ttcctgctgc ttcagttgaa gttagaagaa
     1081 atgaaggttt ttgtgtacga cagtttaccc ggacatgtca gtgaaaaaaa acttgacgaa
     1141 gttttcaaga ttttgggtga caacttacca gtgtacttga aggcgattga ctattttaac
     1201 aagacgcaag actcccaaat tgttggatac tatgaaaata aagagagtgt ggagttgatg
     1261 attgaacctg gtcccaggat tatttatgga agggaggagg ttgacaacat tggagatgct
     1321 aaaaaggctg cagagcagta tagaaacaga atggcaagaa cgttttttcg tgcacgtttt
     1381 gatacacaag aaccgccgcc accaactcca ccagtagaga ttcaggttga ttga
//
LOCUS       XM_071831332             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NDR1/HIN1-like protein 2
            (LOC139841099), mRNA.
ACCESSION   XM_071831332
VERSION     XM_071831332.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139841099"
                     /note="NDR1/HIN1-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139841099"
     CDS             1..591
                     /gene="LOC139841099"
                     /codon_start=1
                     /product="NDR1/HIN1-like protein 2"
                     /protein_id="XP_071687433.1"
                     /db_xref="GeneID:139841099"
                     /translation="MAEKLERVRWREGYRVRGKRKRDGCGFMVVVVTRRKEVICAVIT
                     TNNTPEVDVNDVTLTRFMLSPTKNKLYYYVAANMTFRNPYSNYVGIYFDIIDVDLMYQ
                     GQRLGTKEMPDVFYLPPNEEKSVMNVVLRGEHVLQLINGDEKLVYASENKSGVYKIGV
                     KARIVMRSRVMWVNTEKHTYKIICDNLEVPLTSGQV"
     misc_feature    241..489
                     /gene="LOC139841099"
                     /note="Late embryogenesis abundant protein; Region: LEA_2;
                     pfam03168"
                     /db_xref="CDD:427176"
ORIGIN      
        1 atggcagaga aactagagag agtgagatgg agagagggat atagagtgag agggaagaga
       61 aaacgtgatg gttgcgggtt tatggtggtg gttgtcacga gaagaaagga ggtgatctgc
      121 gcagtgatca caaccaataa caccccagaa gttgacgtca atgacgtcac actcactcga
      181 ttcatgttgt cgccaacaaa aaacaagttg tactattacg ttgcggcaaa catgacgttt
      241 agaaaccctt acagcaatta cgtgggtatt tattttgata tcattgatgt cgacttgatg
      301 tatcaaggcc agcgattggg gacaaaagag atgcccgatg tgttttattt accgcctaac
      361 gaggagaaaa gtgttatgaa tgtggtatta agaggcgaac atgtattgca attgattaat
      421 ggcgatgaaa agttggttta tgcatcggaa aataaaagtg gtgtttataa gattggtgtg
      481 aaggcaagaa ttgtgatgag gtctagagtc atgtgggtga acaccgagaa acatacatat
      541 aagattatat gtgataattt agaggttcca ttaacttccg gtcaagttta a
//
LOCUS       XM_071831333            1737 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841100), mRNA.
ACCESSION   XM_071831333
VERSION     XM_071831333.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1737
                     /gene="LOC139841100"
                     /note="uncharacterized LOC139841100; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841100"
     CDS             1..1737
                     /gene="LOC139841100"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687434.1"
                     /db_xref="GeneID:139841100"
                     /translation="MGADPKPPHSATLMRKPNNPVRRIIQEHGVYDHSSNSGRSLKHN
                     PESIRHPQLPNLNYAAKRVIPACVWYLDSGCSRHMTGDKSMLTNYVNKFLGTVRFGND
                     EIATIEGYGDYVFNGVTIKRVSYVRGLGCCLFSVSQFCDSDLRVIFERSMCCVQTMEG
                     DNLLEGKRESTLYSLAMKNMSSDLQALCLVSKASSETSWLWHHRMSHLHSQNLNKLVS
                     NNLVDGVPLISFDSTHAGITHQSSAARTPQQNGVVERRNRTLVESARTMLVYSKLPPS
                     LWAEAVNTACFTQNRSIVNRRFEKIPYELLFNHRPNVKFFRIFGCVCYVLNDKDNLGK
                     FNVRGDEAIFIGYSQDRVAYRVYNRRTRIIKESTNVKFDEMSGMVLGHNCSRPGLNSD
                     PHFRHVPLATSDDLNSSEFLLQDDLDTGVSSSNNTPISNSHPSAVESSPLESSEDTPS
                     NEIDTRSLDAATPPILSTEQNADTLVPLWEENATYPTDNTALSRSSSSSHIVTSLNDG
                     STSPLLHSTKWTADHPIHQIIGDPDAPVRTRKASNNECLFAAFLSTIEPKTAFEALQD
                     PDWSIAMQEEIH"
     misc_feature    514..690
                     /gene="LOC139841100"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    706..>861
                     /gene="LOC139841100"
                     /note="Integrase core domain; Region: rve_3; cl22978"
                     /db_xref="CDD:451473"
ORIGIN      
        1 atgggtgctg atcccaaacc accacattcc gcaaccttga tgagaaagcc aaacaaccct
       61 gttcgaagaa taatccaaga acatggtgtg tatgaccact caagcaacag tggtagatcc
      121 ttgaaacaca accccgaatc catcagacat ccgcaactac caaatctcaa ctatgctgca
      181 aagcgggtta tcccagcatg tgtttggtat ctggattctg gttgttccag acacatgact
      241 ggtgataaat caatgttgac aaactatgtc aacaagttcc taggtacagt tcgctttgga
      301 aatgatgaaa ttgcaaccat cgaagggtat ggtgattatg tgttcaatgg tgtaaccatc
      361 aaacgcgtgt cctatgttcg aggccttggg tgctgtctct tcagtgttag tcaattctgt
      421 gacagtgatc tccgcgtgat ctttgaaagg tccatgtgct gtgttcaaac catggaggga
      481 gacaatttac tcgaaggaaa acgtgaatcc actctttatt ctcttgccat gaaaaacatg
      541 tcttctgatc tacaagcact ctgtctggtt tccaaagctt cctctgaaac ctcatggttg
      601 tggcatcacc ggatgtcaca tcttcactct cagaacctca acaaacttgt ttccaataat
      661 cttgttgacg gtgttccact catctcattt gattccacac acgccggtat cacccatcaa
      721 tcctctgccg ctcgtactcc acaacaaaat ggcgtagttg aaagacgaaa tcgtactctt
      781 gttgaatccg caagaacaat gcttgtttat tccaaattac ctccgtccct ttgggctgag
      841 gctgttaaca ctgcatgctt cacccaaaat cggtccattg ttaatcgtcg gtttgaaaaa
      901 attccatatg aacttctttt caatcatcga cccaacgtga agttctttcg catatttgga
      961 tgtgtgtgct atgttctaaa tgacaaggac aaccttggaa agtttaatgt tcgcggtgat
     1021 gaagcaatat ttattggcta ctctcaagat cgtgtggcat atcgtgttta taatcgtcga
     1081 actcgaatca ttaaagaaag caccaatgtc aagtttgatg agatgtctgg aatggtgctt
     1141 ggtcataact gctctcgccc tggactcaat tctgatcctc acttccgaca tgttccactg
     1201 gccacctctg atgatcttaa ttcctccgaa tttcttcttc aagatgacct tgacactgga
     1261 gtgtcttcct caaacaacac tcccatttcc aactctcatc cttcagctgt tgaatcgtct
     1321 cctctcgaat ctagtgaaga tactccttca aatgaaatag atactaggtc tttagacgct
     1381 gcaactcctc ccatactttc cactgaacaa aatgcagata cccttgttcc tctgtgggaa
     1441 gaaaatgcca cctaccctac tgacaacact gcactttcta gatcctcatc ttcttcacat
     1501 atcgtcacct ctcttaatga tggatctact tcacctcttc tacattccac gaaatggact
     1561 gcggatcatc caattcatca aatcattggt gatccagacg ctcctgtccg cactcgcaag
     1621 gcttccaaca atgaatgcct cttcgctgcc tttctgagca cgatcgaacc taaaactgcc
     1681 tttgaggccc tccaagatcc cgactggtct atagccatgc aagaagaaat tcattaa
//
LOCUS       XM_071831334            1338 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841101), mRNA.
ACCESSION   XM_071831334
VERSION     XM_071831334.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1338
                     /gene="LOC139841101"
                     /note="uncharacterized LOC139841101; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841101"
     CDS             1..1338
                     /gene="LOC139841101"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687435.1"
                     /db_xref="GeneID:139841101"
                     /translation="MLSMKIISFNIRGFRVGNSIEKIGWVRNLLSKERPSFIALQETR
                     LKQVNLSWINALCGFSNCNFVQKERVGFAGGQLIIWDTDQFDASDTIVFDCVLGVHGV
                     WKATNSPVNFLNIHGPHDDAGKVRLWESLSKILGVEDEAWILCGDFNEVREEVDRLNC
                     EFIEYLAKRFNDFISNNQLMEIPLGGRNFTRISDDGLKFSKIDRFLCTEKFFSLWKDV
                     SAVTLERKISDHCPIMLKDEGKNFGPKPFKIFDAWLDEVGIEDVICKAWEIPVPNINR
                     KDCMFRNRLKNVKNALRDWSSNRFGGLDAEIEALKLLSMNYELKAENNGLNDNERKAW
                     IDCRKKWIDKDKVKSCMLKQKARVKWCLEGDENTSYFHSIINRNNNRNNMRGLIINGV
                     WNESPTEIKEEVFKHFKHVFEECNGERPSMEDLSYPSLSLDDANALELPFEEK"
     misc_feature    16..705
                     /gene="LOC139841101"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(28..30,124..126,346..348,439..441,445..447,607..609,
                     685..690)
                     /gene="LOC139841101"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197305"
     misc_feature    order(124..126,685..687)
                     /gene="LOC139841101"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197305"
     misc_feature    order(346..348,445..447,688..690)
                     /gene="LOC139841101"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197305"
ORIGIN      
        1 atgttatcaa tgaagattat ctcgttcaat ataaggggtt ttcgtgtcgg gaattcaatc
       61 gaaaaaattg gttgggttcg taacctactg agtaaggaaa ggcctagttt tattgcacta
      121 caggaaacta ggttgaaaca ggttaatctc tcttggatta atgctttatg tggcttctcg
      181 aactgtaatt tcgtacagaa agaacgtgtc ggttttgcag gtggacaatt gatcatctgg
      241 gacactgatc agtttgatgc ttctgatact attgtgttcg attgtgtctt gggtgttcat
      301 ggtgtttgga aggctaccaa ctccccggta aacttcctaa acatccacgg cccgcacgat
      361 gacgcaggta aagtcaggct atgggaatct ctttctaaaa ttctgggggt tgaagatgaa
      421 gcatggatat tgtgcggtga ttttaacgag gtcagggaag aggtggatag actcaattgt
      481 gaattcatag agtatcttgc taagcgtttc aatgacttta tctcaaacaa tcagttgatg
      541 gaaattccat taggcggcag gaactttacc agaatcagtg atgatgggtt aaaattcagt
      601 aagattgacc gattcttgtg taccgaaaag ttcttcagct tgtggaagga tgtctcggcg
      661 gtgacactag aaagaaaaat ctcggaccat tgcccgatca tgcttaaaga tgaaggtaaa
      721 aatttcggcc ctaaaccatt caagattttt gatgcgtggc ttgatgaagt aggtattgag
      781 gatgtcattt gcaaagcttg ggaaatcccg gtacctaaca ttaacaggaa ggattgtatg
      841 tttcgaaata gattaaaaaa tgtcaagaat gccttaaggg attggagctc aaataggttc
      901 ggagggcttg atgctgagat tgaggccttg aaattgttgt caatgaacta tgagctaaaa
      961 gcagaaaata atgggttgaa cgacaatgaa agaaaggcct ggatagattg taggaagaag
     1021 tggattgata aagataaagt aaaatcgtgt atgctaaaac aaaaagcgcg tgtcaagtgg
     1081 tgtctcgagg gggatgaaaa tacgagttat ttccattcca ttataaaccg aaacaataac
     1141 aggaacaaca tgaggggctt aatcattaat ggtgtttgga atgaatcgcc aaccgaaatt
     1201 aaagaggaag tctttaagca cttcaaacat gtttttgagg aatgtaatgg tgaaaggccg
     1261 agcatggaag atctaagcta cccatcactg tccttggatg atgcaaatgc tcttgaactt
     1321 ccttttgaag agaaataa
//
LOCUS       XM_071831335            1353 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841102), mRNA.
ACCESSION   XM_071831335
VERSION     XM_071831335.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1353
                     /gene="LOC139841102"
                     /note="uncharacterized LOC139841102; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841102"
     CDS             1..1353
                     /gene="LOC139841102"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687436.1"
                     /db_xref="GeneID:139841102"
                     /translation="MGSQLCPYPTMQWPKQQQFNVNGQPGLLGPRPQAYSYAPSTSLS
                     TPTDIVSAMYTMSLNPLEDINWYMDTGAPSHMTGLQGFFEGDHHSSGGIDFSRSHGYL
                     RSFPSSSGAGRFVGSRSDNRLAKPVRIRAGSWNVGTLTGKRYELVETLRKRKDDILCV
                     QETRWKGRGAVKIKDYKLWFSGSRVARNGVGILIGPPYNENVVDVSRRGDRIMSVRLV
                     IQEVTYTVISAYAPHVGLGAAEKRHFWESLNEVVRMCPPDHRLLIGGDLNGHIGTNAE
                     GYQGAHGGFGYGVRNEEGLSILDFTVAHDLVVANSFFKKTNAQLATFHSGGHFTQIDY
                     LLLFKGDLRTRGDCKALTDLTCSSQHRLLVMDLVLRRWVTKSVRPVQPKILWKKLNGE
                     KAETFKTLVIERVEAELEMSSHNEADQMWTFLASTIREAAKEALGVAVGTLRGHRSDR
                     "
     misc_feature    394..1101
                     /gene="LOC139841102"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(403..405,484..486,688..690,796..798,802..804,
                     997..999,1075..1080)
                     /gene="LOC139841102"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(484..486,1075..1077)
                     /gene="LOC139841102"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(688..690,802..804,1078..1080)
                     /gene="LOC139841102"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atgggctccc agttatgtcc gtatcccact atgcagtggc ccaaacaaca acagtttaat
       61 gttaatgggc agcctggact tcttggccca cgaccacagg cctactcata tgcaccttct
      121 acatctttgt ccactccaac agatattgta tccgcgatgt atactatgag tctaaatcca
      181 ctggaagaca tcaattggta tatggatacg ggtgcaccat cacatatgac gggtttgcaa
      241 ggattttttg aaggggacca ccattcttcg ggagggattg actttagtcg ttctcatggt
      301 tacttgaggt catttccttc gagctcaggg gcgggcaggt ttgtaggatc tagaagcgac
      361 aataggttag cgaagccggt taggattaga gcaggtagtt ggaatgtggg tactttgacc
      421 ggcaaacgtt atgaactagt ggaaacttta cgtaaacgga aagatgacat tttgtgtgtc
      481 caagagacta ggtggaaggg tcgaggggcg gttaagatca aggactacaa gctgtggttc
      541 tcgggatcga gagtagctag aaacggtgtt ggaattttaa ttggcccacc ctataacgag
      601 aatgtcgtgg atgtgagtag acggggcgat aggattatgt cggttaggtt agtaatccag
      661 gaggtgacct acacagtcat tagcgcttac gctccgcatg tgggccttgg cgcagctgaa
      721 aagagacact tctgggaatc gttaaacgag gtagtgagga tgtgccctcc ggaccatcga
      781 ttactaattg ggggggatct aaatggtcat ataggaacga atgccgaggg ttatcagggt
      841 gcccatgggg gctttgggta cggagtaaga aatgaggaag ggctctctat tctcgatttt
      901 acggttgctc acgatttggt tgttgcgaat tcgttcttca agaagacgaa tgctcagcta
      961 gcaacttttc atagcggggg tcattttacc cagattgact atttgctact tttcaaaggg
     1021 gatcttagga cacgtgggga ctgtaaggcc ctgacggact taacgtgctc ctcccagcac
     1081 agattgttgg tcatggattt ggttctccgg agatgggtca ccaagagcgt aaggcccgtc
     1141 caacctaaaa tcctatggaa gaagttgaac ggagagaagg cagagacttt taaaactttg
     1201 gttattgaaa gagtcgaggc agaattggaa atgtcatctc ataatgaggc ggaccagatg
     1261 tggacttttc tggcatccac cattagagag gcagctaagg aagccttagg tgtggcagta
     1321 ggaacattga gaggacatag gtcggataga taa
//
LOCUS       XM_071831336             444 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841103), mRNA.
ACCESSION   XM_071831336
VERSION     XM_071831336.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..444
                     /gene="LOC139841103"
                     /note="uncharacterized LOC139841103; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841103"
     CDS             1..444
                     /gene="LOC139841103"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687437.1"
                     /db_xref="GeneID:139841103"
                     /translation="MSEYKIHPTCTVTNIRNYIPIILEMENGQYDSWVELFTIHCRAY
                     MDIDHIIPKDTSSIASDTTSDTTPAITDSTDNWDRLDAIVLTWIYGTISKDNRHTHLV
                     HLQHKFNNIKIDDFPNASAYCQELKSIVDQLSNVDPDIDDDRLVL"
     misc_feature    211..>438
                     /gene="LOC139841103"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcagaat acaaaataca cccaacttgc actgtcacca acattcgcaa ttatatccct
       61 ataatcctag agatggaaaa cggccaatat gactcttggg tcgaactgtt tacaatccac
      121 tgtcgagctt atatggacat tgatcatata attcccaaag atacttcatc catagcctct
      181 gacacaactt ctgatacaac acctgctatc actgattcaa ccgataattg ggatcgtttg
      241 gatgctattg tcctcacatg gatctacggt actatttcca aagacaatcg tcatacccat
      301 ctcgttcacc tgcaacacaa atttaataac atcaaaattg atgatttccc taatgcctcg
      361 gcatattgtc aggaattaaa atcaattgtc gatcaactgt cgaatgttga tcctgacata
      421 gacgatgacc gtttggtttt ataa
//
LOCUS       XM_071831337            2292 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841104), mRNA.
ACCESSION   XM_071831337
VERSION     XM_071831337.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2292
                     /gene="LOC139841104"
                     /note="uncharacterized LOC139841104; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841104"
     CDS             1..2292
                     /gene="LOC139841104"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687438.1"
                     /db_xref="GeneID:139841104"
                     /translation="MVDTLRSGKKYDNKVSEKEVVQQESSKSPIVLDEEEVSEVDDQG
                     KGVKNKDPIVNETGKSETESKPVPFPKALESPNQFPYGKKGPQPEDMWETFKQVKINL
                     PLLDAIRQVSSYAKFLKDLCTQKRKQRATLPKKVELTENLSAVVSGTLPPKFKDPGTP
                     LIAVTVGNVNVKKVLLDLGASINILPFCLVDHFELGLMKRTDIIIQLADQSVKTPRGI
                     LEDVIVKVEDFYYPVDFVVMDIEPRNRDAQPTIILGCPFLTTINAHINCRTGAMDISF
                     SNRKMRINIFNSLHTPNVHECYRIDVVDELVEKHTSHLITNDPIEVFCLGDEEDVECE
                     EVKAVELPVASTMDARLPPWTHKYEPLPKSIDTNTRPSLESPPTLELKPLPSHLKYAF
                     LGTDGTLPVIIASNLTGVKEKALMEVLHKYKAAVGWTIADLKGISPSVCMCRIFTDPE
                     VKPAHDTQRRLNPNLQEVVKKEVLKWLDAGIIFPISDSQWVSPTQTVPKKAEITVMET
                     EEGEKITTRPVTGWRVCIDYRKLNAVTSKDHFPLPFIDQIIEKLSGQKFYCFLDGYSG
                     YNQIPIHPNDQEKMTFTCPYGTYAFRRMPFGLCNAPATFQRCMMSIFSELIGESLEIF
                     MDDFSIFGKSFESCLNMLEKVLKRCTETNLVLSWEKSHFMVREGVVLGHIVSERGFEV
                     DRAKVQLIATLPPPTNVKGVRSFLGHAGFYRRFIKDFSVISKQLCNLLLKDAPFDFDV
                     QCKEAFNTLKRKLTEAPILQSPD"
     misc_feature    484..777
                     /gene="LOC139841104"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(529..531,535..537,541..543,613..621,754..756)
                     /gene="LOC139841104"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    529..537
                     /gene="LOC139841104"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    529..531
                     /gene="LOC139841104"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(613..624,634..645)
                     /gene="LOC139841104"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1438..2025
                     /gene="LOC139841104"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(1684..1701,1786..1791,1870..1872,1876..1881,
                     2011..2016)
                     /gene="LOC139841104"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(1684..1701,1786..1788,1876..1878)
                     /gene="LOC139841104"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    1789..1791
                     /gene="LOC139841104"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    2221..>2289
                     /gene="LOC139841104"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atggtagata ccttgagaag tggaaagaag tatgacaaca aggttagtga aaaagaggta
       61 gtgcaacaag agtcaagtaa gtctcctatc gttcttgatg aggaagaggt aagtgaagtt
      121 gatgaccagg gaaaaggggt gaaaaataag gacccaattg ttaatgagac cgggaaatcg
      181 gagacggaat caaaacccgt cccatttccc aaggccttag agtctccaaa ccaattccct
      241 tatgggaaaa agggaccaca accagaggac atgtgggaaa cgtttaaaca ggttaagata
      301 aatttacccc tcctcgatgc tattaggcaa gtctcgtctt atgctaaatt tttaaaggat
      361 ctttgcactc aaaagaggaa gcaaagggcg actttaccca aaaaggtgga gttaaccgag
      421 aaccttagtg cggttgtttc gggtacactt ccacctaagt ttaaggaccc agggacccca
      481 ttgatagctg tgacagtagg aaacgtgaat gtgaaaaagg tgttattgga cctaggagct
      541 agcattaata tcttaccttt ttgtttagtt gaccattttg aattgggtct aatgaaaaga
      601 actgacataa ttattcaact agcggaccag tcagtcaaaa ctcctagggg gatattagaa
      661 gatgtgatag taaaagtgga ggatttctat tacccagttg actttgttgt tatggatatt
      721 gaacctagga atagagatgc ccaacccact ataatcttgg gatgcccatt tttgaccacc
      781 attaatgctc acattaattg tcgaacggga gctatggaca tatctttcag taatcgcaag
      841 atgaggatta atatctttaa ttctcttcat acaccgaatg tccatgaatg ctatcggata
      901 gatgtggttg atgaattagt ggaaaaacat acttctcacc taataaccaa tgacccaata
      961 gaagtatttt gcttaggtga tgaagaggat gttgaatgtg aagaggttaa ggcagtcgaa
     1021 ttaccagtag caagtacaat ggatgctagg ttgccaccgt ggactcataa atatgagcca
     1081 ctacctaaat ccattgatac taatacgaga ccttcactag agtcaccacc gactcttgag
     1141 ttaaaaccct taccttctca tttgaagtat gcatttttag gtactgatgg cactttgcca
     1201 gttattattg cttcaaattt gacaggtgtg aaggaaaaag ctttaatgga agtgcttcat
     1261 aagtacaagg ctgcagtagg gtggacaata gctgatttga aagggataag tccctcagtg
     1321 tgtatgtgta ggatatttac agatccggag gttaaacctg ctcatgatac gcaacgcagg
     1381 ttgaacccga atttgcagga agttgtaaag aaggaagttc tcaagtggtt agacgcaggg
     1441 attattttcc ctatttcaga cagtcagtgg gtaagtccca cacaaacagt gccaaagaaa
     1501 gctgagataa cggtaatgga aaccgaagaa ggtgaaaaga tcacaacccg tcccgtgacg
     1561 ggttggcggg tatgtattga ttacaggaag ctaaatgctg tgacttcaaa ggatcacttt
     1621 cccttgcctt ttattgatca aatcattgaa aagttgtcag gtcagaaatt ttattgtttc
     1681 ttagatgggt attcgggata taaccaaata cctattcacc ctaatgacca agaaaaaatg
     1741 acttttacgt gtccttatgg aacttatgct tttaggcgaa tgccttttgg tctatgtaat
     1801 gcaccggcta cttttcaaag gtgtatgatg agtattttct cagagttaat aggcgagtcg
     1861 ttagaaatct ttatggatga tttttcaata tttggcaagt cttttgagtc gtgtttgaat
     1921 atgttggaaa aagttttaaa gaggtgtacc gagactaacc ttgtccttag ttgggaaaag
     1981 agccacttta tggttcggga aggggtggtt ttgggacaca ttgtgtctga gcggggattt
     2041 gaagtagata gagcaaaagt tcaacttatt gctacattac ctccaccgac caatgttaag
     2101 ggggtaagat catttttggg acatgcggga ttctatcgta ggtttatcaa agattttagc
     2161 gttatttcta aacaattgtg taatttgtta ttaaaagacg caccttttga ctttgatgtc
     2221 caatgtaagg aggcctttaa cacccttaag cgtaagttga ccgaagcacc cattttgcaa
     2281 tcacccgatt ag
//
LOCUS       XM_071831338             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor protein kinase-like
            protein ZAR1 (LOC139841105), mRNA.
ACCESSION   XM_071831338
VERSION     XM_071831338.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139841105"
                     /note="receptor protein kinase-like protein ZAR1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841105"
     CDS             1..720
                     /gene="LOC139841105"
                     /codon_start=1
                     /product="receptor protein kinase-like protein ZAR1"
                     /protein_id="XP_071687439.1"
                     /db_xref="GeneID:139841105"
                     /translation="MNHVICLKVTPSQLQMRIGPLMHIYIGGPANPLPPLSWASRLKI
                     AQGTARGLAHIHECSTRKHVHGNIKSSKILLDDDLQPFISGFGLNRLVAATISKSTSR
                     KLSNSSQLTITSSISSSSSSSDVHYVAPEVRILGHKVSPKCDVYSFGIVLLEMLTGRA
                     PDGDGLDNNGKGLESFVRKVFREERPLSEIIGPVLLQEVRAKKQVLASFYIALNCTEL
                     DPEVRQKMRMVSDSLDRIKLQ"
     misc_feature    <94..708
                     /gene="LOC139841105"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgaatcatg tgatctgttt gaaagtgact ccatcacaac tgcaaatgag gataggacca
       61 ctcatgcaca tttatatagg tgggcccgca aacccgttgc caccgttatc atgggcctca
      121 aggttaaaga ttgctcaagg taccgcaagg ggtctagctc atatccacga atgcagcact
      181 cgaaaacacg ttcacgggaa cataaaatca tcaaaaatcc ttcttgatga tgacttgcag
      241 cccttcatat ctgggttcgg gctcaaccgt ctagttgcag ccaccatctc aaaatccaca
      301 tctcgaaagc ttagcaactc tagccaacta acaatcacga gctctataag ctcatcgtct
      361 tcatcgtcag acgtgcatta cgtggctcca gaggtgcgga ttttgggcca caaagttagc
      421 ccaaaatgtg atgtctactc ttttgggatt gtattgttgg aaatgttaac gggccgggct
      481 cctgatgggg atgggctcga taacaatggg aaagggctag agagttttgt gaggaaggtg
      541 tttagagagg aaaggccgct gtcagagatt attggccctg tgcttttgca agaggttcgt
      601 gccaagaaac aagtcttggc ttcattttat attgcgctta attgcaccga gcttgacccc
      661 gaggttcgac agaagatgcg aatggtctct gatagtcttg accgtatcaa attgcagtga
//
LOCUS       XM_071831339            2055 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841106), mRNA.
ACCESSION   XM_071831339
VERSION     XM_071831339.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2055
                     /gene="LOC139841106"
                     /note="uncharacterized LOC139841106; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841106"
     CDS             1..2055
                     /gene="LOC139841106"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687440.1"
                     /db_xref="GeneID:139841106"
                     /translation="MEKQVQCQDSEQVVAVDEYDYDKPLELILTHENLMTYLLPLNLI
                     SKEHSNYAPERPKWENLKHLKIRLSDIIFATDSFSKANLLWTEGHHQVYKAELEHFDQ
                     ETFTLVEENNKSEVTKRRTTHHNIVTLLGFCDEDFELILVFENTSNKLSSYLKDTEKP
                     ILTWAECLRICLDVAYGLRYLHYGMEAQKVIIHRDISSDTIALDGNLGAQIAKFGKSV
                     FLPSYLDDHTLYPDTIIGCFGYGYPEYMNIGKLNRESNVYSFGVILYEILCGKVIDLS
                     HYTENEEEWVHEVRRCFHDGTIKDMVDPIIKEESGDIFALSKGPNKNSMDAFLKIVDA
                     CLVEIQDKRPTINVVIEELEKALMFQAKQNETNKIHLINSFRSKQQRHPQVSLEDIEL
                     ATKNFHVENCVGGGGFGKVYKGKIPHSDNIIVAKQLDTTGGQGDKQFRNELQILVNYK
                     HDNIISLVDYCDEKDAKIIVYEYAIRGSLDRHLNDSHLTWTKRLSICIDVASALDFLH
                     GGDKTLATVIHRDIKPDNILLTGDWKAKLGDFGLSLTSAINNETDFVIDHACGTEGYV
                     DPLYMKSRFLTKESDIYLFGVVLFEILCGRSTFDCKRQEHVHLSVFIKDVFEKGKGDH
                     DEIVFEKIKKEIIPEALSVFQMIAYQCLNENSEKRPKAKEVVQQLKKALELQISYHTF
                     SY"
     misc_feature    274..1065
                     /gene="LOC139841106"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1207..2013
                     /gene="LOC139841106"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1207..1218,1225..1227,1231..1233,1270..1272,
                     1276..1278,1363..1365,1411..1422,1561..1563,1573..1578,
                     1582..1584,1612..1617)
                     /gene="LOC139841106"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggagaagc aagtacaatg ccaagattct gaacaagttg ttgctgttga tgaatatgat
       61 tatgataaac cattagaatt gatattgaca catgaaaatc ttatgactta tctgttgccg
      121 ttgaatttga tatcaaagga acattcaaat tatgcacctg aaaggcctaa atgggagaat
      181 ctgaagcacc taaaaattcg actcagtgat atcatatttg ccaccgatag cttttcaaag
      241 gcaaaccttc tttggactga aggtcaccat caggtataca aagcagaact tgagcatttc
      301 gatcaagaaa cttttacctt agtagaagag aacaataaaa gcgaagtaac taagagacgc
      361 accactcatc ataacatagt tactctactt ggattttgtg atgaagattt cgagttgatc
      421 cttgtttttg agaatactag taataaactt tctagttatc tgaaggacac tgagaaacct
      481 attcttactt gggcagaatg tttgagaata tgtcttgatg tagcatatgg attaaggtac
      541 ctacactacg ggatggaagc ccaaaaggtg ataattcatc gtgatataag tagcgacaca
      601 attgctttag atgggaattt gggggcacaa attgccaagt ttggtaagtc ggtatttctt
      661 ccttcgtatc tagatgacca tactctttat cccgatacga ttattggttg ttttggttac
      721 ggatatccgg aatatatgaa cattggtaag ttaaatagag aatcgaatgt atatagtttc
      781 ggagtaattt tgtatgaaat tttatgtggt aaagtaatcg atctatcaca ctatacggag
      841 aatgaggaag agtgggtaca tgaggtgcga agatgcttcc atgacggaac tataaaggat
      901 atggttgatc ctataattaa ggaggaaagt ggtgacattt ttgccctgag taaaggacca
      961 aacaaaaatt caatggacgc atttttgaaa atagtagatg cgtgtttggt agaaattcaa
     1021 gacaaacggc caacaataaa tgttgttatc gaggagctcg agaaagcctt aatgtttcaa
     1081 gcgaagcaaa atgagacaaa caaaatacat ttaataaatt cttttagaag taaacaacaa
     1141 agacaccctc aggtttcact tgaagacata gaattagcaa ccaaaaattt ccatgttgaa
     1201 aattgtgttg gtggaggagg gtttgggaaa gtttataaag gaaaaattcc acatagtgat
     1261 aacataattg ttgcaaaaca attggatacg acaggtggtc aaggggataa gcaatttcgg
     1321 aatgagctcc aaattcttgt taactataag catgacaata tcattagtct tgtagactat
     1381 tgtgatgaaa aagatgcaaa aatcattgtc tatgagtatg caataagagg aagtcttgat
     1441 aggcacttga atgatagtca tcttacttgg acgaaacgac ttagcatatg cattgatgtt
     1501 gcatccgcat tggattttct tcatgggggt gacaaaacac tagcaacggt tatacataga
     1561 gacatcaaac ccgataacat tttgctaacc ggtgactgga aagcaaaact tggtgatttt
     1621 ggactttcct tgacaagtgc aataaataat gaaaccgact tcgtcattga tcatgcgtgt
     1681 gggacagagg gctatgtgga tccactttac atgaaatcgc gtttcttaac caaagaatct
     1741 gatatatatt tgtttggtgt agttttattt gaaatcttgt gtggaagatc aacgttcgat
     1801 tgcaaaagac aggaacatgt gcatctatca gttttcatta aagacgtatt tgaaaaagga
     1861 aaaggagatc atgatgaaat tgtatttgag aaaattaaaa aagagattat ccctgaagca
     1921 ttgagtgtat tccaaatgat agcctaccag tgcttaaatg agaacagcga aaaacgacca
     1981 aaagcaaaag aagttgtgca acaacttaag aaggctttgg aattgcagat aagttatcat
     2041 accttttctt attag
//
LOCUS       XM_071831340             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            ANXUR2 (LOC139841107), mRNA.
ACCESSION   XM_071831340
VERSION     XM_071831340.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139841107"
                     /note="receptor-like protein kinase ANXUR2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139841107"
     CDS             1..567
                     /gene="LOC139841107"
                     /codon_start=1
                     /product="receptor-like protein kinase ANXUR2"
                     /protein_id="XP_071687441.1"
                     /db_xref="GeneID:139841107"
                     /translation="MEDQKTVIYRFFSTISIALDENFGAKIVDFGKSIFLPPNHDIHY
                     FGTIFGSTMYTDPEYLFYGTLKRESDVYAFGVVLFEIFCGRLAIDKMYLSDVGLAYVA
                     RRCFRKGTIMEMIDPRIKEEGPNKDSIDTFLKIAYWCLAETQDQRPTMKDVVKELEKA
                     FPLQRGLRMYIFDLLGSLLRGLEFKLDH"
     misc_feature    <49..477
                     /gene="LOC139841107"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atggaagacc aaaagacggt gatatatcgt tttttctcta caatatcaat tgcgttagat
       61 gagaattttg gggcaaagat tgtcgacttt ggaaaatcga tcttccttcc accaaaccac
      121 gatattcatt atttcggtac aatttttggc tctacaatgt acactgatcc agaatatctt
      181 ttctatggta cattaaaaag agaatcagat gtatatgctt ttggagtagt tttgttcgaa
      241 attttctgtg gaaggctagc tatcgataaa atgtacttgt cggatgttgg actggcatat
      301 gtggcacgtc gatgcttccg caaaggaacg ataatggaaa tgatagatcc tcgaattaag
      361 gaagaaggac ccaacaaaga ttctatagac acatttttga aaattgcata ttggtgttta
      421 gctgaaaccc aagaccaacg tccaacaatg aaagacgtcg ttaaagagct tgagaaagca
      481 ttcccacttc aacgtgggtt gcgaatgtat atcttcgatc ttcttggttc tttgcttaga
      541 ggacttgaat ttaaactgga tcactga
//
LOCUS       XM_071831341             759 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL25 (LOC139841108), mRNA.
ACCESSION   XM_071831341
VERSION     XM_071831341.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..759
                     /gene="LOC139841108"
                     /note="probable serine/threonine-protein kinase PBL25;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139841108"
     CDS             1..759
                     /gene="LOC139841108"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL25"
                     /protein_id="XP_071687442.1"
                     /db_xref="GeneID:139841108"
                     /translation="MVRMATMLSQAFVMAKMVEDDVRAARNRMEGYVMPQQDQENNKD
                     ALKISLENIQLATENFHDKNFVGGGGFGKVYKGKLPHSDNTIVAKRLDTKGGQGEKQF
                     RNELQIRFNFKHDNIISLVGYCDEKDAKIIVYEYAIRGSLDGHLKDSHLTWMKRLNIC
                     IDIATALDFLHGGDETLATVIHRDIKPDKILLSSDWKAKLGDFGLSLTSVINNETDFV
                     IDHACGTEGYVDPLYMKSRFLTKESDIYCWCGFI"
     misc_feature    244..>741
                     /gene="LOC139841108"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atggttagga tggcgacgat gttatcacaa gcattcgtta tggccaagat ggtggaagat
       61 gatgtcagag ccgcaagaaa cagaatggaa ggttatgtga tgccacaaca agatcaagaa
      121 aacaacaaag atgccctcaa gatttcactt gaaaacatac aattagccac agaaaacttc
      181 catgataaaa attttgttgg aggaggaggg tttgggaaag tttataaagg aaaacttcca
      241 catagtgata atacaattgt tgcaaaacga ttggatacaa agggtggtca aggggagaag
      301 caatttcgga atgagcttca aattcgtttt aactttaagc atgataatat cattagtctt
      361 gtaggctatt gtgatgaaaa agatgcaaaa atcattgtct atgagtacgc aataagagga
      421 agtcttgatg ggcacttgaa agatagtcat cttacttgga tgaaacgact taacatatgc
      481 attgatattg cgactgcatt ggatttcctt catgggggag acgaaacact agcaacggtt
      541 atacatagag acatcaaacc tgataaaatt ttgctatcca gtgactggaa agcaaaactt
      601 ggtgattttg gactttcctt gacaagtgta ataaataatg aaaccgactt cgtcattgat
      661 catgcgtgtg ggacagaggg ctatgtggat ccactttaca tgaaatcacg tttcttaacc
      721 aaagaatctg atatatattg ttggtgtggt tttatttga
//
LOCUS       XM_071831342            1647 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841109), mRNA.
ACCESSION   XM_071831342
VERSION     XM_071831342.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1647
                     /gene="LOC139841109"
                     /note="uncharacterized LOC139841109; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841109"
     CDS             1..1647
                     /gene="LOC139841109"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687443.1"
                     /db_xref="GeneID:139841109"
                     /translation="MEEGHFLGFMITPRGIKENLNKIQAIEYMLSPRSKKGVQSLNGK
                     LATLKGCLSKKDFIWTDEVERAFQDVKAFLKELPALTAPIPGETLTVYLAASSEAISS
                     VLITDRGKTQMPVYFVSKVLQNGELTAYVDSQLVASQLNGSFEARDTSMQKYQELTKA
                     LTNTFAAFEIKQIPRNRNKKADALRKLASLLYDHFTKKVMVEVLERKSTEEDTLMAKI
                     TTEEECWMTPFIKYLTDGTLPEDKLQAHRIRMRAPMYYFKNGILYRKSFIEPYLRCVG
                     PTQAKEIIREMHEGACSMHSGYRMIFSRIKRMGYFWPHMYQDTYDLIVNCETCQIHAP
                     INRSPRRNMIPIHAAWPFCKWGIDFVGPFPRGVGNVKFLVVAIDYFTKWIEAKPLSTI
                     TGRKILIFVWEDIICHFDLPREIANGQVEVTNRDIVADIKARLEFDEQQNDDALRENL
                     DALEEWRTIAHTRQAKKKQQIANHYDKKVKPLDFQLKDLVLRNNEASRQQDVRKLGPR
                     WEGPYRVIGITEYGAYHLETPDGVPIQRPWHAFHLKKYHV"
     misc_feature    175..>378
                     /gene="LOC139841109"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    <364..567
                     /gene="LOC139841109"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    823..1002
                     /gene="LOC139841109"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggaagaag gtcatttctt gggtttcatg atcactccga gaggaatcaa agaaaacctg
       61 aataaaattc aagcaatcga atatatgctg tcacccagga gtaaaaaggg cgtgcaaagc
      121 ctaaacggga aactagcgac gttaaagggt tgcctgagca aaaaagattt catatggacg
      181 gatgaggtcg agagggcctt ccaggatgtg aaggcattct taaaagagct gccggcatta
      241 acggcaccta taccaggtga aaccctcacg gtgtaccttg ccgcctcctc tgaggcaatc
      301 agctcagtcc taattaccga caggggtaaa actcaaatgc cggtgtactt tgtaagcaaa
      361 gtattgcaaa acggggaact cacggcttat gtcgactcgc aactagtagc aagtcagcta
      421 aatggcagct tcgaagcaag agatacatcg atgcaaaaat accaagaact tacgaaggca
      481 ctaaccaaca cctttgcggc atttgaaata aaacaaatac cccgaaatcg taacaagaaa
      541 gcggatgctc tgagaaagct tgcctctttg ctgtacgatc actttaccaa aaaggttatg
      601 gttgaagttc tggaaagaaa gtcaactgaa gaggataccc tcatggcgaa aatcacaaca
      661 gaagaagaat gttggatgac acccttcata aaatacctta ctgacggaac cctcccggag
      721 gacaaattac aagcccacag gatacgaatg cgggcaccaa tgtattattt caaaaacggc
      781 atcctgtaca ggaaatcgtt catagaacct tacttacgat gcgttggtcc gacacaggcc
      841 aaagagataa tacgagaaat gcacgaggga gcctgctcaa tgcactccgg ctaccgaatg
      901 atatttagca ggatcaagag aatgggttat ttctggccac acatgtatca ggatacgtat
      961 gacctgatcg taaactgcga aacatgtcaa atacacgctc ccatcaacag atctcctcgt
     1021 cggaacatga ttccaataca cgccgcttgg ccattctgca aatgggggat cgatttcgtc
     1081 ggcccattcc cacgaggtgt cggtaatgtt aaattcctag tagtcgcaat cgactacttt
     1141 actaagtgga ttgaggcgaa accgttaagc acgattacag gaaggaaaat cttaatcttt
     1201 gtgtgggagg acattatttg tcatttcgac ttaccacgag agatagccaa cggacaagtc
     1261 gaggtcacta acagagacat cgtcgccgac atcaaagcaa gactagaatt cgatgaacaa
     1321 caaaacgatg atgcattacg agaaaattta gatgctctgg aagaatggag aacaatagcg
     1381 catacccggc aagccaaaaa gaagcaacaa atcgcaaacc actatgacaa aaaagttaaa
     1441 ccactggact ttcaattaaa agatttggtt ttgcgcaaca acgaggccag ccgacagcaa
     1501 gacgtcagaa aattaggccc cagatgggag ggaccctaca gggttatcgg cataactgag
     1561 tatggtgcat accacctgga gacaccagat ggagttccga tacaacgccc ttggcatgcc
     1621 ttccatttaa agaaatatca cgtgtaa
//
LOCUS       XM_071831343            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At2g23200 (LOC139841110), mRNA.
ACCESSION   XM_071831343
VERSION     XM_071831343.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139841110"
                     /note="probable receptor-like protein kinase At2g23200;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 30 Proteins"
                     /db_xref="GeneID:139841110"
     CDS             1..1116
                     /gene="LOC139841110"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At2g23200"
                     /protein_id="XP_071687444.1"
                     /db_xref="GeneID:139841110"
                     /translation="MDLKGDTKSPITKFGQLHIPLEDVLKATNNFDDQNVIGRGELGK
                     VYQGRLLQSGKLVKIDARRFYSKHKHGIEFLREISALSSLEHDNIVSIIGFCDEQNEK
                     VIIYKREAKGNLEMHLSKPNVRWIQRLRISIGSARALCYIHNERSLMHLNINSSTILL
                     NNKFELKLSGFEYSIRHSVHRMNDVHEVHLTAAIGTTGYIDPEIVKTGGVTHKSDIYS
                     FGVVLLELLSARKAFIRNDDDDRFLVARAKLNSEDSDIKDLVPSNRYEQIGYESGNIF
                     TSVARYCLKEERIQRPDMKYIVGKLEKALELQLPYEISIVRPYSLFFFFSAIIIISVS
                     SLLTIILVDNKELSRDAVDINMFKCGWRNWIKMGSVF"
     misc_feature    109..909
                     /gene="LOC139841110"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(109..120,127..129,133..135,268..270,316..327,
                     454..456,466..471,475..477,505..510)
                     /gene="LOC139841110"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggatctaa aaggagatac gaaatctcca atcacgaagt ttggtcagtt acatatccca
       61 cttgaagacg tattgaaagc caccaacaac tttgatgatc aaaatgtgat cgggcgtggc
      121 gaactgggta aagtttatca aggacggctt ttgcaatcag ggaagttggt aaaaatcgat
      181 gctcgcagat tttacagtaa gcataaacat ggcatcgagt tcttgagaga gatttctgca
      241 ctttctagtc tcgagcatga taacatagtc tctattatcg ggttttgtga tgaacaaaac
      301 gagaaggtca tcatatacaa acgtgaggcc aagggaaacc tcgagatgca tctaagcaaa
      361 ccaaatgtta ggtggattca aaggcttagg ataagtattg gtagtgcgcg tgctttatgt
      421 tacatccata atgagagaag tctcatgcat cttaatatca acagctctac aatattgtta
      481 aataataagt ttgagctcaa gttatctgga tttgaatatt ctatcagaca ttcagtacat
      541 cgaatgaatg atgtgcatga agtgcattta acagccgcta ttggaacaac agggtatatt
      601 gaccctgaaa ttgtgaagac tggtggtgtg acccacaagt ctgacattta ctcattcggt
      661 gttgttttat tggaattatt atctgcgagg aaagcgttta tacgaaatga tgatgatgat
      721 aggtttttag ttgcacgggc caaactgaac tctgaagata gtgatattaa ggatttagta
      781 ccatctaacc gatatgagca aataggttat gaatcaggca acatcttcac atcagttgca
      841 agatattgct taaaggaaga gcgaatacaa cgcccagata tgaagtatat tgtcggcaaa
      901 cttgagaagg cattagaact tcagctgcca tatgaaattt caattgtaag accctactct
      961 ttattttttt ttttctctgc tatcatcatt atatctgtta gttcactttt gaccattatt
     1021 ttagttgata ataaggaatt gtcccgagat gcagttgaca taaatatgtt taaatgtggt
     1081 tggagaaact ggattaagat gggttccgta ttttaa
//
LOCUS       XM_071831344            1554 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tubulin beta-2 chain-like
            (LOC139841111), mRNA.
ACCESSION   XM_071831344
VERSION     XM_071831344.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1554
                     /gene="LOC139841111"
                     /note="tubulin beta-2 chain-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 78
                     Proteins"
                     /db_xref="GeneID:139841111"
     CDS             60..1397
                     /gene="LOC139841111"
                     /codon_start=1
                     /product="tubulin beta-2 chain-like"
                     /protein_id="XP_071687445.1"
                     /db_xref="GeneID:139841111"
                     /translation="MREILHIQGGQCGNQIGAKFWEVVCAEHGIDVTGKYTGDSELQL
                     ERINVYYNEASGGRFVPRAVLMDLEPGTMDSLRSGAYGQIFRPDNFVFGQSGAGNNWA
                     KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP
                     DRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT
                     TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR
                     GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAIYRGKMSTKEVDEQMLNVQ
                     NKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK
                     AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEEEEEYDEA"
     misc_feature    60..1382
                     /gene="LOC139841111"
                     /note="tubulin beta chain; Provisional; Region: PLN00220"
                     /db_xref="CDD:215107"
     polyA_site      1554
                     /gene="LOC139841111"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttctcacac acaaattcac acacaaatca ccgattaatt tctataacct cttacgaaaa
       61 tgagagaaat cttacatatt caaggaggac agtgcggaaa ccagatcgga gcaaagtttt
      121 gggaggtagt gtgtgcggaa cacggaatcg acgtcaccgg aaagtacacc ggagattcag
      181 agttacagct cgagagaatc aacgtttatt acaatgaagc gagtggtgga aggtttgttc
      241 cacgcgccgt gcttatggat ctcgagccag gaacgatgga cagtctcaga tctggagcgt
      301 acggacagat cttcaggcct gataactttg tttttggtca atctggtgct ggtaataatt
      361 gggcgaaagg acattatact gaaggtgctg agttgattga ttcagttttg gatgttgtta
      421 ggaaggaagc tgagaactgt gattgcttac aaggatttca ggtgtgccat tctcttggag
      481 gtggaacggg atccgggatg ggtacccttt tgatctcaaa gatcagggaa gagtatcctg
      541 accgtatgat gatgaccttc tctgtattcc catcaccaaa ggtgtctgac actgttgtgg
      601 agccctacaa tgccaccttg tctgtccacc aacttgttga aaatgctgat gagtgtatgg
      661 ttcttgataa tgaagctttg tatgatattt gcttcagaac actcaaactg actaccccaa
      721 gttttggtga cctaaatcat ctcatatctg caaccatgtc tggagtgact tgctgtctaa
      781 ggtttcctgg gcaactcaac tccgatctaa gaaagcttgc tgtgaatctt atcccattcc
      841 cgcgtctcca ctttttcatg gttggttttg ctcctctcac ttcacgtggc tcccagcagt
      901 accgtgctct gactgtacct gagctcaccc aacaaatgtg ggatgccaag aacatgatgt
      961 gtgctgctga cccacgacac gggcgatact tgaccgcatc agccatctac cgtggtaaaa
     1021 tgagcaccaa agaagttgat gagcagatgc ttaacgtcca gaacaagaac tcgtcttact
     1081 ttgttgagtg gatcccaaac aatgttaagt ccactgtttg tgacatccca ccaactggtt
     1141 tgaaaatggc atctactttc attggaaact cgacctccat tcaagagatg ttcaggcgag
     1201 tgagtgagca gtttactgct atgttcaggc gaaaggcttt tctgcattgg tacaccggtg
     1261 agggtatgga cgaaatggag tttacagagg cggagagcaa catgaatgat ttggtttcgg
     1321 agtatcagca atatcaggat gctacagctg atgaggaggg agagtatgag gaggaagagg
     1381 agtatgatga ggcctaagaa agtaatgatt acttgttatt ggtacaacct atggttgtaa
     1441 tctcagctgc tgccttttta taaacttgtt tagtgtatta ggtattttat gattttaaga
     1501 ttccgttgta ctttgtctat ttggattaca agcaatattt cctttttgtt gatc
//
LOCUS       XM_071831345             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841112), mRNA.
ACCESSION   XM_071831345
VERSION     XM_071831345.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139841112"
                     /note="uncharacterized LOC139841112; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841112"
     CDS             1..846
                     /gene="LOC139841112"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687446.1"
                     /db_xref="GeneID:139841112"
                     /translation="MRDTRKFCDFHNDFGHETDDCIQLRQAIKEAVRFGKLSHLVKGI
                     RNPMVPKQEAKPEEKRLNADNAILTVTECLAVEKLRTYKRERKSGVIYWEEISFTALD
                     TVTPSDKPVTINGRIFEREVHRVYLDGGSACDIMYEHCFDQLSPSIKALLSPPRVPLI
                     GFSGERCWPIGEVDLDFTIGEPPLSRTKTLDFVVVRSTSQHNILLGRVAILKTGIIVS
                     TVHQLVKFYTPEGIGTLASTYHREKVIMAIREMEERPGECILETREEDPSEEKISINP
                     LFPEQ"
     misc_feature    331..621
                     /gene="LOC139841112"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(382..384,388..390,394..396,475..483,610..612)
                     /gene="LOC139841112"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    382..390
                     /gene="LOC139841112"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    382..384
                     /gene="LOC139841112"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(475..486,496..507)
                     /gene="LOC139841112"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgagggata cacgcaaatt ttgtgacttt cacaatgact tcgggcacga aacagacgac
       61 tgtatacaat tgaggcaggc cataaaggag gcagtcagat ttgggaaatt gtcacatcta
      121 gtaaaaggca tacgcaaccc gatggtacct aagcaagagg ccaagcccga agaaaaaagg
      181 ctaaatgcag acaacgccat attgacggtc acagaatgct tagccgttga gaagctaaga
      241 acctacaaaa gggagagaaa gagtggagta atatattggg aagagatctc cttcacagca
      301 cttgataccg tcactccctc cgacaaacct gttacaatca acggacgtat ctttgagaga
      361 gaagtgcatc gagtttactt agatggcggc agtgcatgcg acatcatgta cgagcattgc
      421 ttcgatcaac ttagcccttc catcaaagct ctcctaagcc caccaagggt acctctaatc
      481 ggattctctg gagaaagatg ttggcctatc ggagaggtag accttgattt caccatcgga
      541 gagccaccat tgtctaggac caaaacactt gacttcgtag tagtccggtc cacctcacaa
      601 cataacattt tgctagggag ggtagcaata ttgaaaacgg gaataattgt ttccactgta
      661 caccaattgg tgaagttcta tacacccgaa gggattggta ccctagcttc aacttatcat
      721 cgggagaaag taatcatggc tatcagggaa atggaggaaa ggccagggga atgtatcctt
      781 gagactagag aggaagatcc aagtgaagag aaaatctcca tcaatcctct gttccctgag
      841 caataa
//
LOCUS       XM_071831346            1152 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841113), mRNA.
ACCESSION   XM_071831346
VERSION     XM_071831346.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1152
                     /gene="LOC139841113"
                     /note="uncharacterized LOC139841113; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841113"
     CDS             1..1152
                     /gene="LOC139841113"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687447.1"
                     /db_xref="GeneID:139841113"
                     /translation="MVRPRAPATPTYTLTAEQFQQLLAATRGRGAAQAPPHNVTCSYK
                     NFMDCKPTSYNETEGPIELIRWFEKLESVFRISNCLEADHVKYATHTLSGSALTWWNA
                     HCQTVGIDVANATPWDTVKRMMTDKYCPRNQVQKLEAEFYGHVVKNDDIESYNHRFLE
                     LASLCPSMVTPLYKMIEKYVEGLPSDIQGNVISAGKETIEGAMLLAQDLVMAARRKKA
                     ISKPTESNSPTQNSGKKPADGKPRCNRCDKNHYGRCMVPCTNCKKTGHLAKNCRLPAA
                     TASVAKAYFPTCYGCGGKGHIKPNYPKKKTDASNAKGGAFVMTTEEAPDDDEVITADK
                     HFKIDLLPVELGSFDVVVGMDWLSPIKAGIMCFDKTINTPLENDETLII"
     misc_feature    256..549
                     /gene="LOC139841113"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <706..912
                     /gene="LOC139841113"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    <988..1113
                     /gene="LOC139841113"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atggttcgac cacgagctcc agctactcca acttatacct taactgcaga acaattccag
       61 cagctactcg ctgcaactcg aggcagaggt gctgctcaag ctccgcccca caatgttact
      121 tgctcttaca aaaattttat ggattgcaag cctacatctt acaatgaaac tgaaggacca
      181 atcgaattga ttcgttggtt cgagaaactt gaatccgtgt ttcgtatcag caactgttta
      241 gaagctgatc atgttaagta tgccacccac accctttctg ggagtgctct gacctggtgg
      301 aatgcccatt gccaaactgt agggattgat gttgctaacg ctactccatg ggataccgtc
      361 aaaagaatga tgaccgataa gtactgtcct aggaatcagg tccagaaatt ggaggccgaa
      421 ttctatggac acgtggtaaa gaatgacgac atagagtcat ataatcatcg ttttctggaa
      481 ctagcatcct tgtgtccatc tatggtcacc cccttataca agatgataga aaagtatgtt
      541 gagggtctac cttctgatat ccaggggaat gttatatctg ctggtaagga aactattgag
      601 ggtgctatgc tgttagccca agatttagtt atggctgcta gaagaaagaa ggcaattagt
      661 aaaccaactg agagtaatag tcccacccag aactcaggta agaagccagc tgatgggaaa
      721 cctagatgta accgatgtga taaaaaccac tatgggagat gtatggtacc gtgcaccaac
      781 tgcaagaaaa caggtcatct tgccaaaaac tgtagacttc ctgctgctac agcttctgtc
      841 gcaaaggcct atttccctac ctgctatggt tgtgggggaa aaggtcatat caagcctaac
      901 tatccaaaga agaaaactga tgctagtaat gctaaaggcg gggcttttgt catgactact
      961 gaagaagccc ctgatgatga tgaagtgata acggccgaca aacactttaa gatagactta
     1021 ttgccagtcg agttgggaag ctttgatgta gttgtaggga tggattggtt atccccaata
     1081 aaggcgggaa ttatgtgctt tgataaaacc attaacactc cccttgagaa tgatgaaacc
     1141 ttaatcattt aa
//
LOCUS       XM_071831347            4970 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841114), mRNA.
ACCESSION   XM_071831347
VERSION     XM_071831347.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4970
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4970
                     /gene="LOC139841114"
                     /note="uncharacterized LOC139841114; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841114"
     CDS             165..4970
                     /gene="LOC139841114"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687448.1"
                     /db_xref="GeneID:139841114"
                     /translation="MDLKRDMKSAITKFSHLRIPLEDVLEATNNFDDKNVIGHGDLGK
                     VYKGKLLQSGKWVKIAARRLDSKHKRGIEFWTEISALSSLKHEYIVSIIGFCDENGEK
                     VIVNKHDAKRSLVMYLSNPTLSWIQRLRISIGVARALCYIHNEGSLIHLNINSSTILL
                     DDKFEPKLSGFEYSIRPSVHRMDDVLLTDAIGTTGYIDPEIVKTGGVTHKSDIYSFGV
                     VLLELLCGRKAFIPNNDDKFLVSLAKLRYQEDKLYNLTLTSLLNQMDRESRQIFSSAA
                     MSCVEDDRVQRPDMKYIVGQLEKALELQLPYETITRPNLKQLTSQLSHLKIRLADILL
                     ATNNFSDAYHIISTEFYDVYRAEIGQWDKHNRSSSTVTIKRMRHQEDYDDVFGNEIEI
                     LATCKHPNIVTLLGFCNEDLEKILIIENACFNGYVDEYLSNERDKSMLTWERRLKICL
                     DVAYGLKYIHYEMEDQKTVINRFLSTSVIALDENFSAKMVDFGKSVFLPPNQDDHYLG
                     TISGAPNHEDPEYSESGRLKRESDVYAFGVALFEMLCGRLASDKMYMMESKVGLADVA
                     RRCFVQGTIMEIIDPIIKEESDDNNFILTKGPNKDSIDTFVKIAYRCLAETQDQRPTM
                     RVVVEELEKALSYQENSKDQLKISLEDIQLATKNFHDKHVLGRGRFGKVYKGKLPQTD
                     NTIVAKRLDTKGGQGEKQFWNELQILFEYKHDNIINLVGYCDEEDAKIIVYEYAPRGS
                     LDRYLSDARLNWMKRLQICIDVATALDFLHGGDEKVATVIHRDIKPDNILLTGDWNAK
                     LSNFGLSFTSAINNKSDFVIDHMCGTEGYVDPLYLKSGFLTKESDIYSFGVVLFEILY
                     GRSTFFFKKMEGVHLPIFIKDIFEKGEHDAIVFEEIKEHIMPEALNLFQMIAYRCLNE
                     NKEERPKAKEVVKQLKKALELQFQVRRLEKLKIPLEKIKASTNNFSKECFIGRNNFGN
                     EYKGEPSHYQGSAVIISRRESQKVEENLKFLAMISALSNYEHENIATLVGYCDDSGEK
                     IVVFKHVENGSLDKYIGRTRLTWTQLIQICVGVARGVEYLHRNVDPKFTVVHRNLSSS
                     IILLDEKWEPKITGLWLSRLDPSSPYLVTNNVVGGGSLGYLDPKYMTTGILTQKSDTY
                     SFGIILLEILCCRMALEERIGETLSFLGPLAIRHYENEKLDELIDPILRKQMDPNSFN
                     AFKQIAFECLNKERRKRPSMGVILKALEKALEFQRKMNEAQPFHVVGGDGGSDGGDGA
                     RSGGGGGAGINDASGGASCSDVGGGDGTGGNGGGGGDGVGGAGGGGGAGINDASGGAT
                     CSDVGGGDGTGGNGGGGGGGGGGGGGGGSGGGSGGGGGDGGGGGDSGADDEQCDDNSF
                     KIEKFKHLNVSLKEILVATDNFNAKGVIGEGGFGLVYRAELFHVDVREYVGKNESHEL
                     SHGGYRRKQSVVALKRLNSKYGQGRPQFEKEIKVLSRLNHQNLIVLLGFCDEKGEMIL
                     IYEYASKKSFNNYIQREHNLTWSQRLQICIDTAQGLNYLHKHHIIHRDMKTHNILLGG
                     NWNGMIGDLGLSITHNNSDSPLKVDPAGTEGYVDPTYFFQHILTKQSDI"
     misc_feature    273..1061
                     /gene="LOC139841114"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(273..284,291..293,297..299,342..344,348..350,
                     432..434,480..491,618..620,630..635,639..641,669..674)
                     /gene="LOC139841114"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1203..2063
                     /gene="LOC139841114"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1203..1208,1215..1217,1221..1223,1278..1280,
                     1284..1286,1368..1370,1416..1421,1431..1433,1581..1583,
                     1593..1598,1602..1604,1632..1637)
                     /gene="LOC139841114"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2157..2957
                     /gene="LOC139841114"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2157..2168,2175..2177,2181..2183,2223..2225,
                     2226..2228,2313..2315,2361..2372,2511..2513,2523..2528,
                     2532..2534,2562..2567)
                     /gene="LOC139841114"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    3057..3863
                     /gene="LOC139841114"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(3057..3068,3075..3077,3081..3083,3123..3125,
                     3129..3131,3216..3218,3264..3275,3414..3416,3426..3431,
                     3435..3437,3465..3470)
                     /gene="LOC139841114"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    4380..>4967
                     /gene="LOC139841114"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(4380..4391,4398..4400,4404..4406,4509..4511,
                     4515..4517,4602..4604,4650..4661,4788..4790,4800..4805,
                     4809..4811,4839..4844)
                     /gene="LOC139841114"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 cacatactct caaagtcaaa ggcaagatta acatcaatta tagggttcca tccccaaatc
       61 gaccaggaat tttcatttta tgcaataaat attttttatg cgagactcaa tgaagtttgc
      121 aaagaatcag gttcaatgaa gttcgtatca ccagaaacag atagatggat ctaaaaagag
      181 atatgaaatc tgcaatcacg aagtttagtc acttacggat cccacttgaa gacgtactag
      241 aagccaccaa caactttgat gataaaaatg tcatcggcca tggtgatttg ggcaaggtat
      301 ataaagggaa gctcttgcag tccgggaaat gggtcaagat tgctgcacgt agattagaca
      361 gtaagcataa gcgaggcatc gagttctgga cagagatttc tgctctttcc agtctcaagc
      421 atgaatacat tgtctctatt atcggatttt gtgatgaaaa tggtgagaag gtgatcgtaa
      481 acaagcatga tgccaagaga agcctcgtga tgtatctaag caatccaacc ctctcatgga
      541 ttcaaaggct taggataagc atcggtgttg cgcgtgcttt atgttacatc cataatgagg
      601 gaagcctcat acatcttaat atcaacagct cgacgatatt gttagatgat aagtttgagc
      661 ccaagttatc aggatttgaa tattctatca gaccttcagt acatcgaatg gatgatgttc
      721 ttttaacaga cgctattgga acaacagggt atatcgaccc tgaaattgtg aagactggtg
      781 gagtgaccca caagtccgac atctactcat ttggtgttgt tttattggaa ttattgtgtg
      841 ggaggaaagc gtttatacca aataatgatg ataagtttct agtttcactg gccaaattga
      901 gatatcaaga agataagtta tacaatttaa ccctaactag cttgctcaat caaatggatc
      961 gagaatcgcg ccaaatcttc tcatcagcag caatgagttg cgtggaggat gaccgagtac
     1021 aacgcccaga tatgaagtat attgtcggcc aacttgagaa ggcattggaa cttcaactgc
     1081 catatgaaac tataactaga cccaacttga aacagttgac atctcaactc agtcacttga
     1141 agattaggct tgctgatata ttattggcca ccaataactt ttctgacgca taccacatca
     1201 tatcaactga gttttacgat gtatacagag cagaaattgg gcaatgggat aaacacaatc
     1261 gttcttccag taccgtcact ataaaacgca tgcgccatca agaagattat gatgatgtat
     1321 tcggtaacga aattgaaatt cttgcaactt gtaaacatcc caacatagtc actctacttg
     1381 gattttgtaa tgaagatctc gagaagatcc ttattattga gaatgcttgt tttaatggat
     1441 acgttgatga atatctgtca aacgaaagag acaaatccat gcttacttgg gaaagacgtt
     1501 tgaaaatatg ccttgatgtt gcatacggat tgaaatacat acactatgag atggaagacc
     1561 aaaagacggt gataaatcga ttcttatcta catccgtaat tgccttagat gagaattttt
     1621 cggcaaagat ggttgacttt gggaaatcgg tcttccttcc tccgaaccaa gatgatcatt
     1681 atcttggtac aatttcggga gctccaaatc acgaagatcc agaatatagt gagagtggta
     1741 ggttaaaaag agaatcagat gtatatgctt tcggagtagc tttgttcgaa atgttatgtg
     1801 gtaggttagc cagcgataaa atgtacatga tggagagtaa agttgggctg gctgatgtag
     1861 cacgtcgatg cttcgttcag ggaacaataa tggaaattat agatcctata attaaggaag
     1921 agagtgatga caacaatttt attctaacta aaggacccaa caaagattct atagacacat
     1981 ttgtgaaaat tgcgtatcgt tgtttagctg aaactcaaga ccaacgtcca acaatgagag
     2041 tcgtcgtcga agagcttgag aaagcattgt cgtatcaaga aaacagcaaa gaccaactca
     2101 agatttcact cgaagacatt caactagcca caaaaaactt ccatgataaa catgttttag
     2161 gcagaggaag gtttgggaaa gtttataaag gaaaacttcc acaaactgat aacacaattg
     2221 ttgcaaaacg gttggatacg aagggtggtc aaggggagaa gcaattttgg aatgagctcc
     2281 aaattctttt tgagtataag cacgataata tcatcaatct tgtaggctat tgtgatgaag
     2341 aagatgcaaa aattattgtt tatgagtatg cgcccagagg aagtcttgat aggtatttga
     2401 gcgatgctcg tcttaattgg atgaaaagac ttcaaatatg tattgatgtt gcaaccgcat
     2461 tggattttct tcacggggga gacgaaaaag tagcaacagt tatacataga gacatcaaac
     2521 ccgataacat tttgctaacc ggtgactgga atgcaaaact tagtaatttt ggactttcct
     2581 ttacaagtgc aataaataac aaaagtgatt tcgtcattga tcatatgtgc gggacagagg
     2641 gctacgtgga tccactttac ttgaaatctg gtttcttaac caaagaatct gatatatatt
     2701 cgtttggtgt ggttttattt gaaatcttgt atggaagatc aacattcttt ttcaaaaaga
     2761 tggaaggcgt gcatctaccc attttcatta aagacatatt tgaaaaagga gaacatgatg
     2821 caattgtatt tgaggaaata aaagaacata tcatgccgga agcattgaat ctatttcaaa
     2881 tgatagccta ccgatgctta aatgaaaata aagaagaacg accaaaagca aaagaagttg
     2941 taaaacaact taagaaggcg ttggaattgc aatttcaggt tagaaggcta gaaaagttaa
     3001 aaatccccct ggaaaagatt aaagcgtcca ctaacaactt ttctaaagaa tgcttcatcg
     3061 gaaggaataa ttttgggaat gagtataaag gtgaaccctc acactaccaa gggagtgctg
     3121 tcataataag tcgacgggag agtcaaaaag ttgaagaaaa ccttaagttt ctagcaatga
     3181 tatctgcgct ttctaattat gagcatgaaa atattgcaac tcttgttggc tattgtgacg
     3241 atagtggtga gaaaattgtt gttttcaagc atgtggaaaa cggaagtcta gacaaataca
     3301 taggtagaac gagactcaca tggacgcaac tcatccaaat atgtgttggt gttgctcgtg
     3361 gtgtcgaata tcttcatcgt aatgttgacc ccaaattcac agtggttcat cgtaatctta
     3421 gcagttcaat tattctatta gatgagaaat gggagccaaa gataactggt ttatggcttt
     3481 ccagattgga tccgtcaagc ccttatttag tcactaataa tgttgttggt ggtggttcgt
     3541 taggctatct tgatccaaaa tacatgacta ctggtattct aacacaaaag tctgatacgt
     3601 attcctttgg gattatatta ttagaaatct tatgttgtag aatggcatta gaagagcgca
     3661 tcggagaaac actcagtttt cttggcccac ttgccattag gcattacgag aatgaaaagc
     3721 tggatgagtt aatagatccc attctaagga aacaaatgga tccaaattcg tttaacgcgt
     3781 tcaaacaaat tgcatttgag tgcttgaaca aagaaagaag aaaacgccca agcatgggtg
     3841 tcattctgaa agcacttgag aaggcgttgg agtttcaacg aaaaatgaat gaggctcaac
     3901 catttcacgt tgtcggtggt gatggtggta gtgatggtgg cgatggagcc cgaagtggtg
     3961 gtggcggtgg ggctggtatt aatgatgcta gtggtggtgc tagttgcagt gacgttggtg
     4021 gtggggatgg cactggtggt aatggaggag gaggcggtga cggtgttggt ggtgccggtg
     4081 gtggcggtgg ggctggtatt aatgatgcta gtggtggtgc tacttgcagt gacgttggtg
     4141 gtggggatgg cactggtggt aatggaggag gcggtggtgg tggcggcggt ggtggtggcg
     4201 gtggcggcag tggcggtggc agcggtggtg gtggcgggga tggaggtggt ggtggtgata
     4261 gtggggctga tgatgaacaa tgtgatgata acagtttcaa gatagaaaaa ttcaaacact
     4321 tgaatgtttc tcttaaagag atccttgtag ctactgataa tttcaatgct aagggagtaa
     4381 ttggagaagg tggctttgga ctagtctaca gagcagaact tttccatgtt gatgtaaggg
     4441 agtatgttgg aaaaaatgaa tctcatgaac tctcacatgg tggctaccga agaaaacaaa
     4501 gtgttgttgc tcttaagcgg ttaaacagca aatatggtca aggacgacca caattcgaga
     4561 aggagattaa agttctatct cgattaaatc atcaaaattt aatcgttctt cttggttttt
     4621 gtgatgaaaa aggtgaaatg atactcattt acgagtacgc ctcgaagaaa agctttaata
     4681 actacattca aagagaacac aatctaacct ggtcacaacg tcttcaaatt tgtattgaca
     4741 cggcccaagg tttaaattat cttcacaagc accacataat acatcgtgat atgaagaccc
     4801 ataacattct attgggtgga aattggaatg gtatgatagg cgacttgggg ttgtctatta
     4861 ctcataataa ttcagactct ccactaaagg ttgaccctgc aggcaccgaa ggttatgttg
     4921 atccaacata ttttttccaa catatattga ccaaacagtc tgatatatga
//
LOCUS       XM_071831348             597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841115), mRNA.
ACCESSION   XM_071831348
VERSION     XM_071831348.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..597
                     /gene="LOC139841115"
                     /note="uncharacterized LOC139841115; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841115"
     CDS             1..597
                     /gene="LOC139841115"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687449.1"
                     /db_xref="GeneID:139841115"
                     /translation="MAPSGKYDKIYTVTSVLHLILIKLHQFIEGSSSSDPPDEETSKA
                     DAVVLGWIFLTISETLLERLLNSQPKTAFAAWEFLKKIFQDNKRSKIVELTVELRSLN
                     IGDLTAEQYFRKVESLDVLLTNLGSKIDEDELVTYAINGLNKRFPHSHHIILHSNPFP
                     SFNTVRSMITLEEMQVSRKSRNNVDALGTPYAHTVLVA"
     misc_feature    145..537
                     /gene="LOC139841115"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggctcctt ccggcaaata tgataaaatc tacacagtca catcggttct tcatctaata
       61 ctgatcaaac tccaccaatt tattgaaggt tcatcctcat ccgatccacc tgatgaagaa
      121 acaagcaagg ccgacgctgt cgtgttgggg tggattttct tgactatttc agaaaccctt
      181 ctagaacgac tgttaaattc gcagcctaaa actgccttcg ctgcttggga atttctaaag
      241 aaaatatttc aagacaacaa gcgctcaaag attgttgaac ttacagtaga attacggtcc
      301 ctcaacatcg gcgatctaac cgcagaacaa tattttcgaa aggtagaatc cttagatgtg
      361 ttgctaacta acctcggttc caaaattgat gaagacgagt tagtcacata tgcgatcaac
      421 gggctaaaca agcggtttcc acactcccat cacatcatcc tacatagcaa tccatttcca
      481 agtttcaata cagttcggtc tatgatcacc cttgaggaga tgcaagtctc acgcaaaagc
      541 agaaacaatg tcgatgcctt gggcacccca tatgctcata ctgttcttgt tgcataa
//
LOCUS       XM_071831349            2082 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841116), mRNA.
ACCESSION   XM_071831349
VERSION     XM_071831349.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2082
                     /gene="LOC139841116"
                     /note="uncharacterized LOC139841116; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841116"
     CDS             1..2082
                     /gene="LOC139841116"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687450.1"
                     /db_xref="GeneID:139841116"
                     /translation="MSSEVVSSVHLLVYKFSLSIPNHLMLSVNRKIVLSSVEDEAVFE
                     AFDEGYFGIGRGVCDLGVIVREEIKHTSEENILKHLKIQRSAIFLATSNFNKAYISRL
                     GDDHREYLAELEYFDQENSAYVDENNRSEPPKKRTLVKIKRLFNIRHGQEREDQERKD
                     LFTKEILVLSTCKHPNILNLLGFCDDDSEMIIVYENKISEYLDTYLMNKEKPNFTWAK
                     RLRICLDVAYGLEYLHYGVDQAIIIHRDIRCGTIILDENLGARIANLCKCVYLLPYRD
                     ENNLYLDTLIGSYGYMDPEYRKMKMRKLKRESDIYSFGVVMCELFCGKLADESDFTES
                     GLAYELRRCFHEGTVTNMVDPIIKEESSGNFTLNRGPNTNSLDAFLKITVACLEETQD
                     KRPTIKVVIEELKKALKFQENNQEALRISLNEIQLATNNFHDNNCVGGGGFGKVYIGK
                     LPLSDYTVVAKRLDTTGGQGDKQFRNELQILFEYKHDNIISLVGYCDEKDTKVIVYEY
                     AIRGSLDRYLNDSRLTWIKRLKICIDVATALDFLHRGTRTLATVIHRDIKPDNILLTR
                     DWNAKLADFGLSLISAINNETDFVFNHACGTEGYVDPLYLKSRFLTKKSDIYSFGVVL
                     FEILCGRSTFQVRKEKGVYVPIFIKDRFEKGKGKHDDVVFEEIKEQIMPEALSVFHTI
                     AYRCLNQKRED"
     misc_feature    409..1218
                     /gene="LOC139841116"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1312..2079
                     /gene="LOC139841116"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1312..1323,1330..1332,1336..1338,1375..1377,
                     1381..1383,1468..1470,1516..1527,1666..1668,1678..1683,
                     1687..1689,1717..1722)
                     /gene="LOC139841116"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgtcttccg aagttgtatc ctcagttcat cttctagttt acaaattttc tctttcaatt
       61 ccaaatcatt tgatgctttc ggtaaatcgg aagattgttc tctcatccgt tgaagatgaa
      121 gctgtgtttg aagcttttga tgaaggttat tttggaattg ggagaggtgt gtgtgatctt
      181 ggtgtaattg tgagggaaga gattaaacac actagtgagg aaaatatctt gaagcatctt
      241 aaaattcaac gcagtgctat attcttggcc acctctaact tcaataaggc atacatttct
      301 aggttgggag atgaccatcg ggaatactta gcagaactcg agtattttga tcaagaaaat
      361 tcagcctacg tagatgaaaa caatagaagc gaaccaccca agaaacgcac ccttgtaaaa
      421 ataaaacgcc tcttcaatat tagacacggc caagaaagag aagatcagga aagaaaagac
      481 ttattcacta aggaaattct agtgcttagc acttgtaagc atcctaacat actgaatcta
      541 cttggatttt gtgatgatga ttccgagatg ataatcgttt atgagaataa aatatcagaa
      601 taccttgata cttatttaat gaataaggag aagcctaatt ttacgtgggc aaaacggttg
      661 agaatatgtc ttgatgttgc atatggattg gagtacttac actacggtgt agaccaagct
      721 attataatac atcgtgatat aagatgtggc acaattattt tagatgagaa tttgggggca
      781 cgaattgcta acctttgtaa atgcgtttac cttcttcctt atcgagatga aaataatctt
      841 tatctcgata ctcttattgg tagttacggt tacatggatc cagaatatcg gaagatgaag
      901 atgcgtaagt taaaaagaga atctgatata tacagttttg gagtagttat gtgtgaactt
      961 ttttgtggta aattagccga tgaatcagac tttacggaga gtgggttggc atacgagcta
     1021 cgaagatgct tccatgaggg aactgtgacg aatatggtag atcctattat taaggaagaa
     1081 agcagtggca actttaccct gaatagagga cccaacacaa attctttgga tgcatttctg
     1141 aaaatcacgg ttgcgtgttt ggaagaaact caagataaac gtccaacaat aaaagttgtc
     1201 attgaggagc tcaaaaaagc cttaaagttt caagaaaaca accaagaagc tctcaggatt
     1261 tcacttaacg aaatacaatt agccactaac aactttcatg ataacaattg tgttggcgga
     1321 ggagggtttg ggaaagttta tatagggaaa cttccactta gtgattacac agttgttgca
     1381 aaacgattgg atacgacggg tggtcaaggg gataaacaat ttcggaatga gctccaaatt
     1441 ctttttgagt ataagcatga taatatcatt agtcttgtag gctattgtga tgaaaaagat
     1501 acgaaggtta ttgtttatga gtatgcaata agaggaagtc ttgataggta cttgaatgat
     1561 agtcgtctta cttggataaa acgacttaag atatgcattg atgttgcaac cgcattagat
     1621 ttccttcata gaggaaccag gacactagca acagttatac atagggatat caaacctgat
     1681 aacattttgc taactagaga ctggaatgca aaacttgctg attttggact ttccttgata
     1741 agtgcaataa ataatgaaac tgacttcgtc tttaatcatg cgtgcggcac agagggctac
     1801 gtagatccac tttacttgaa atcgcgtttc ttaaccaaaa aatctgatat atattcgttt
     1861 ggtgtcgttt tatttgagat cttgtgtgga agatcaacgt tccaggtccg caaggagaaa
     1921 ggtgtgtatg taccaatttt cattaaagac agatttgaga aaggaaaagg aaaacacgat
     1981 gacgtggtat ttgaggaaat aaaagaacag atcatgccgg aagcattgag tgtatttcac
     2041 acgattgctt atcgatgctt aaatcagaaa agagaagatt ga
//
LOCUS       XM_071831350             474 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841117), mRNA.
ACCESSION   XM_071831350
VERSION     XM_071831350.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..474
                     /gene="LOC139841117"
                     /note="uncharacterized LOC139841117; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841117"
     CDS             1..474
                     /gene="LOC139841117"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687451.1"
                     /db_xref="GeneID:139841117"
                     /translation="MAKDRKLRIERFDRKDFGDLCFFAEKVLSPYTLSNILNKVMLGS
                     SSSGNITLLNKFLPQSLGVFVWRSMRGRLPVRLELDKRGVDLNSVRCPVCDNAPESVE
                     HIILECNLSIEIWSRVRDWWNIPSSSVYTDCKMAFNVEDSRGWKQNGHLIWQAVR"
     misc_feature    <160..342
                     /gene="LOC139841117"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcgaaag acaggaaact taggatcgaa cggtttgata gaaaagactt cggcgattta
       61 tgctttttcg ccgaaaaagt gttatcacca tacaccttgt ctaatattct caataaggta
      121 atgctcggga gctcgagttc tggtaacatc acccttttaa ataagttcct tccacaatca
      181 ttgggagtgt ttgtttggag atcaatgcgt ggaaggttac cggtgaggct cgaattagac
      241 aaaaggggcg ttgacctcaa ttcggttcgt tgtccggttt gcgataatgc cccggaatct
      301 gttgagcata tcattttgga atgtaacttg tcgatagaaa tttggtcacg ggttcgggat
      361 tggtggaata ttccttccag ttcagtttac acagattgca aaatggcttt taatgtggaa
      421 gatagtcgtg gttggaagca aaatggtcat ttgatttggc aagcggttcg atag
//
LOCUS       XM_071831351            1863 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841118), mRNA.
ACCESSION   XM_071831351
VERSION     XM_071831351.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1863
                     /gene="LOC139841118"
                     /note="uncharacterized LOC139841118; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841118"
     CDS             1..1863
                     /gene="LOC139841118"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687452.1"
                     /db_xref="GeneID:139841118"
                     /translation="MNPFMTSKGHGQTAAGREDNAVFFACYFDVYLHVLVPKSQGTSI
                     WSFSDEKQVKVIIYKHEAAKGSLVMYLSSPKVTWIQRLRISLGIARALSYIHCEDGRS
                     YSVIHRNINSSTILLDGKFEPKLSEFEYSVNHSVLRMDDVLFSEAIGTTGYIDPEIVK
                     TGGVTHKSDIYSFGVVLLELLCGRKACLPNEKDNFLVSLAKSKFGKIKFYTLMLPGII
                     KEVSRRSIDTFSPAVKSCLMDERLQRPNMKYIVQQLEKAMELQLPYESVTRPSLEHLT
                     SQLSHLKFRMDDMSVPRYNGRVKKAKFYDIYRAYKENIEGDETECLKRSTTVFLKRLR
                     PEEDNLEVVFGMRPKQDMLGDELFRTDIEMLATCKHPNIVTLLGFCVEDLEKMFIIEE
                     ASKGFLSEYLTNDRDKSILTWEKRLKICLDVAYGLKYLHHDMEDQKVVINGCISSDSI
                     ALYENFGAKIVDFGLSIFLPPNQDQDDRCLCAFSGPPHYLDPEYSEMGRLKRESDVYS
                     FGLVLFEILFGQQHYEPIYKTIFNSEDGVANAARRGFLEGTIMDMIDPIIKEEGDDNK
                     ESIDTFVKTAYWCLAKTQDERPTMKFVVKELEKAFSFQVSLKYPFLSLINTDSL"
     misc_feature    127..768
                     /gene="LOC139841118"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    907..1797
                     /gene="LOC139841118"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgaatccct ttatgacctc caaaggtcac ggccaaacag cagcaggaag ggaggataat
       61 gcagtttttt ttgcttgtta ttttgatgtg tacttgcatg tgttagttcc aaagagtcaa
      121 ggaacatcta tatggagttt ctctgatgaa aaacaggtga aggtcatcat atacaagcat
      181 gaggcggcaa agggaagtct cgttatgtat ctgagcagcc caaaggttac atggattcaa
      241 aggctgagga ttagtcttgg tattgcacgt gctttaagtt acatccattg tgaggacggg
      301 cgtagttact ctgtaataca tcgtaatatc aatagctcca caatattatt agatggtaag
      361 tttgaaccca agttatctga atttgaatat tccgtcaacc attctgtact tcgaatggat
      421 gatgttctct tttcagaagc tattggaaca acaggttata tagacccaga aattgtgaag
      481 acgggtggtg tgactcacaa gtcggacatc tactcatttg gtgttgtttt attggaatta
      541 ttatgcggga ggaaagcgtg tttaccaaat gagaaagata actttctagt ttcactggcc
      601 aaatccaaat ttgggaaaat aaaattttac actttaatgc tacctggtat aataaaggaa
      661 gtaagtcgta gatcaattga caccttctca ccagcagtaa aatcttgctt aatggatgag
      721 cgactacaac gcccaaatat gaagtatatc gtccagcaac ttgagaaggc aatggaactt
      781 cagctgccat atgaaagtgt aactagaccg agcttggaac acttgacatc tcaactcagt
      841 catttgaagt ttaggatgga tgatatgagt gtgccaagat ataatggccg cgtcaaaaaa
      901 gctaagttct atgacatata cagagcatac aaagaaaata ttgagggtga tgaaactgaa
      961 tgtctcaaga gaagtaccac tgtctttcta aaacgcctgc gccctgaaga agacaattta
     1021 gaagtggtat tcggcatgcg ccctaaacaa gacatgttag gagatgaact atttcgtaca
     1081 gacattgaaa tgcttgcaac ttgtaaacat cccaacatag tcactctact tggattttgt
     1141 gttgaagatc tcgagaagat gtttatcatt gaggaagctt ctaagggatt cctatctgaa
     1201 tatttgacga acgacagaga caagtctatt cttacttggg aaaagcgttt gaaaatatgt
     1261 cttgatgttg cctacggatt gaaataccta catcatgata tggaagacca aaaggttgtg
     1321 ataaatggtt gtatctcttc agactcaatt gccttatatg agaattttgg ggcaaagatt
     1381 gttgactttg ggctatcgat tttccttcct ccaaaccaag accaagatga tcgttgcctt
     1441 tgtgcattta gcggccctcc acattacctt gatccagaat atagtgaaat gggtaggttg
     1501 aaaagagaat ctgatgtata tagttttgga ttagtattgt tcgaaattct attcggacaa
     1561 caacattacg aaccaatata caagacaatt tttaatagtg aagatggggt ggcaaatgcc
     1621 gcacgtcgag gcttccttga gggaacaata atggatatga tagatcctat cattaaggaa
     1681 gaaggtgatg ataacaaaga atctatagac acatttgtga aaactgcata ttggtgtttg
     1741 gctaaaactc aagacgaacg tccaacgatg aaattcgttg tcaaagagct tgagaaagca
     1801 ttctcgtttc aagtaagtct aaaatatcca tttttgtctt taatcaatac tgattcatta
     1861 taa
//
LOCUS       XM_071831352            1578 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841119), mRNA.
ACCESSION   XM_071831352
VERSION     XM_071831352.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1578
                     /gene="LOC139841119"
                     /note="uncharacterized LOC139841119; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841119"
     CDS             1..1578
                     /gene="LOC139841119"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687453.1"
                     /db_xref="GeneID:139841119"
                     /translation="MDPSLKQLLNEYKDVFEVPKSSPPKRSCDHKIVSKEGTKPIKIR
                     SYKHPPSQKDDVEAMVKELLERHVISAQGVATDPSKVIAIVEWPLPKTLKQLRGFLGL
                     TAYYRRFIKGYAIFSQPLTRLLSKDSFKYFKIVNDHVSLKYLSHQRLSTPTQLKWLSK
                     LIGFNYEINYKTGSDNGGKLVVGLDEPSRLSIIKHFHDDANGGHSCVSSTVQKVTTCF
                     YWKKMKSHVKQYVRECQACQSFKSDLSPYPRLLHPLPIPTRVWIDITMDFIEGLSNSN
                     GKSVIFVVVDRCHFMTLSHPFKAATVALYFLNNVYKLHGLPERIISDRDKIFLSTFWK
                     EMFKMLKVTLQLSTTYHPQTDGKTEVPPPTPIIYHSGESRVDLVDRSLSAREAVITVL
                     KFHLKRAQDRMRSLADSKRTDRELALHSWVYVKLQPHRQIIEKIGQVAYKLELPSTSQ
                     IQLVFHLSQLKDYKGGPITTMGTLPAVDGQGVITPVPTKILDRKLQKKHNRPVVYGLI
                     QWQRGSIEDVMWVPLAE"
     misc_feature    <394..528
                     /gene="LOC139841119"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    550..726
                     /gene="LOC139841119"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    769..1056
                     /gene="LOC139841119"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atggacccaa gtttgaagca attgcttaat gaatataaag atgtgtttga agtgccaaag
       61 tcatcaccac caaagagaag ttgtgaccac aagattgtgt caaaagaagg cacaaaaccg
      121 ataaaaatta ggtcatacaa acatccacct tcacaaaaag atgatgtgga agcaatggtt
      181 aaagaacttt tggagagaca tgttatatca gcacaagggg ttgctactga tccatctaag
      241 gtgatagcta ttgttgaatg gccattacct aaaacattga agcagctgcg tgggtttcta
      301 gggctaactg catactatag aaggtttatc aaaggatatg caatatttag tcaacctttg
      361 actaggttac taagcaaaga ttctttcaag tactttaaga ttgttaatga tcatgtgagt
      421 ttgaagtacc tgtcacatca aagattatcc acaccaaccc agttgaaatg gctttcaaag
      481 ttgattggct ttaattatga gattaactat aaaacgggca gtgataatgg gggtaaacta
      541 gtggtgggat tagatgagcc atcgagattg agtattataa aacacttcca tgatgatgct
      601 aatggtggac actcatgtgt atcatcaact gttcagaagg ttactacttg tttttattgg
      661 aaaaagatga aaagtcatgt caagcagtat gttagagaat gtcaagcttg tcaaagtttc
      721 aaatcagact taagtcctta ccctagacta ttgcatcctt tgccgattcc aacaagagtt
      781 tggatagata ttacaatgga cttcattgaa gggctatcaa attccaatgg taagtctgta
      841 atctttgtgg tggttgacag gtgccatttc atgactttga gtcatccatt taaagctgca
      901 accgtggctc tgtatttctt aaacaatgtg tacaaactac atggactgcc agaaagaatt
      961 ataagtgaca gggataaaat ctttttaagt actttttgga aagaaatgtt caaaatgctt
     1021 aaggtcactc tgcaattatc cacaacctat caccctcaaa cagatggaaa aactgaagtg
     1081 ccaccaccta ctccaatcat ctatcacagt ggtgaaagta gggtggactt ggtagataga
     1141 tcattgtctg caagagaagc tgttattaca gttttaaagt ttcacttgaa aagagctcag
     1201 gacagaatga ggagtttggc agactcaaaa agaacagata gggagttggc attgcattca
     1261 tgggtctatg tcaaattaca gccacatcgg cagataattg agaagattgg tcaagttgct
     1321 tataagctag agctgccgag taccagtcaa atccaactag tttttcattt gtcacaattg
     1381 aaagattata aaggaggtcc aatcactaca atgggaactt taccagcagt ggatggacaa
     1441 ggggttatta caccggtacc aactaaaatt ttggatcgaa aattacagaa gaagcataat
     1501 cgaccggtgg tgtatgggtt aattcaatgg cagcgaggat cgattgaaga tgtaatgtgg
     1561 gtacctttgg cagaatag
//
LOCUS       XM_071831353             528 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841120), mRNA.
ACCESSION   XM_071831353
VERSION     XM_071831353.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..528
                     /gene="LOC139841120"
                     /note="uncharacterized LOC139841120; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841120"
     CDS             1..528
                     /gene="LOC139841120"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687454.1"
                     /db_xref="GeneID:139841120"
                     /translation="MRLSKPHLTVPQKQRILEFSSWILSVGNGELGTPDIDDPTNTRW
                     VHILDRFCIPDNENGLANLISFIYLHETLQKPTASELQQKAIVCPKNDAVDSINKLVV
                     DMVEGSVITYSSSDSATPHGNDGGESEMLYPAEYLNTLNYPGLPPHLLELKIGIPAIL
                     LRNINIAGAYATALE"
     misc_feature    <1..495
                     /gene="LOC139841120"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atgcgtcttt cgaaaccaca tctgacagtc ccacaaaaac aaagaatttt agagttctca
       61 agttggatcc tcagtgttgg aaacggtgag ttagggacac ccgatataga tgatccaact
      121 aatacccggt gggttcatat tctcgacaga ttttgcattc cagataacga aaatgggctc
      181 gcaaatctta tatctttcat atacctacat gaaaccctac aaaaaccaac cgcctcagaa
      241 cttcaacaaa aagccatagt ctgcccaaaa aacgatgcgg tagactctat aaacaaactt
      301 gtagtagaca tggtggaagg gtcggttata acttacagca gctccgatag cgcaacacct
      361 catggcaacg atggcgggga atcagagatg ttgtatcctg cagaatactt gaacacactt
      421 aactacccgg gcctaccacc acatctatta gaattaaaaa taggcatccc tgctatttta
      481 ctgcggaaca ttaatattgc aggggcttat gcaacggcac tagaatga
//
LOCUS       XM_071831354            1269 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841121), mRNA.
ACCESSION   XM_071831354
VERSION     XM_071831354.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1269
                     /gene="LOC139841121"
                     /note="uncharacterized LOC139841121; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841121"
     CDS             1..1269
                     /gene="LOC139841121"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687455.1"
                     /db_xref="GeneID:139841121"
                     /translation="MTFQAHINVEFCGATMLIKYLFKYISKGTDRVAARISRPVDSKS
                     QRTPQLSQPVDEIQNFIDALFICPHEACWRILNFPIHYRDPAVQILAVHLEIMQLLKF
                     HERQPLQSIVENAKKKKKKKKQPSLNGSTIMHRLLSVVTSHTLTSRPNSCGTTQIKVG
                     GGCRSFEDIRTVNEIVHQTYRCACEAIGLLGDDKEWAVVLQECSVSATCSELRSLFAH
                     ILAYCDVTNPLALSNEHWKLISDDIPLRASKSLNIPNLHINDEELRNYVLYEIEIQLN
                     QCSKSISDCGLPGLPPNLLLDLANRLIMEERNYDRQSLNNELIELEGKMNAKQREIYE
                     LVTSASYNHKSELTFVYGHGGTVKTFLWKAIITALRARGKIVLAVASSGIASLLLPSG
                     RTAHSRFKLLLVLTDETMCNIKKTLKWRGC"
     misc_feature    973..>1245
                     /gene="LOC139841121"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    1060..1080
                     /gene="LOC139841121"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgacgttcc aagcgcatat aaatgttgag ttttgcggcg ctacaatgct aatcaagtat
       61 ctattcaagt atatttcaaa gggcacagat cgtgtcgccg ctcgtatttc aaggcctgtc
      121 gatagcaaaa gccaacgtac acctcaactt tctcaaccag ttgatgaaat acaaaacttc
      181 attgacgccc tatttatttg cccacacgag gcttgctggc gcattctgaa tttcccgatc
      241 cattaccgtg acccagcggt ccaaatccta gccgtacacc tagaaattat gcaacttctt
      301 aaatttcacg aacgacaacc ccttcaatct attgtcgaaa atgccaaaaa aaaaaaaaaa
      361 aaaaaaaaac aaccctcact gaatggctcc actataatgc atcgtcttct gtcggtagtc
      421 acctcacata ccttgacttc ccgtccgaat tcttgtggta caacgcaaat aaaagttgga
      481 ggcggctgcc gtagctttga agacatacga acggtcaacg agatcgttca ccaaacatac
      541 cggtgcgctt gtgaggctat tggtctcctt ggtgatgata aagaatgggc ggtcgtgcta
      601 caagaatgtt cggtatcagc cacctgttcc gaactacggt cacttttcgc acatatctta
      661 gcatactgtg atgtgacgaa cccgctagcg ctatcgaatg aacattggaa attaatttct
      721 gatgatatac ctttacgggc ttctaagtct ttaaacatcc caaatttaca tataaacgac
      781 gaagaactcc gcaattatgt tctttatgag atcgaaatac agttgaacca atgttcaaag
      841 tccatttccg actgcggttt accaggctta ccaccgaatc tgttgttaga tctcgccaac
      901 cggttaatta tggaagagag gaactatgat cgtcaatctc taaacaatga actaattgag
      961 ctggagggta aaatgaatgc aaagcagagg gaaatatacg agctcgtaac atcagcatcg
     1021 tataatcata aaagcgaatt aactttcgtt tacggtcatg gcggcacggt taaaacattt
     1081 ctatggaaag ccataataac ggctttacga gcaaggggca aaattgtgct agctgttgcg
     1141 tcatccggaa tcgcatccct tctgctgccc tcagggagga ccgcacactc ccgttttaag
     1201 cttctgttgg tactgactga tgaaacaatg tgtaacataa aaaaaacact caaatggcga
     1261 ggctgttag
//
LOCUS       XM_071831355            1284 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841122), mRNA.
ACCESSION   XM_071831355
VERSION     XM_071831355.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1284
                     /gene="LOC139841122"
                     /note="uncharacterized LOC139841122; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841122"
     CDS             1..1284
                     /gene="LOC139841122"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687456.1"
                     /db_xref="GeneID:139841122"
                     /translation="MVDIPASEWRGSSSLNFIPFNDLITCKLAECVTADIIGRITYIS
                     PEKAYGDSGEESSKYITLELKDLEGANLSCTLWSKYKDDFLAKREKVGDNECVILLIQ
                     FGRTKKFDEQLTVRLDWTFTRILINPNCVEANDFIKSILETHANSEATESLAPSSEPA
                     EDPVEAWFKHTKSIECVDLPFCDPGVYVVHAKIISVLPDDPWWYIGCKKHHKKASPEV
                     ENIDLTLDVDAQLALPRKCVKCVSNPSVALRYKVSVRIEDLTDTATVTLFETQVCKFV
                     TKSAYELQISLPNCHDFPDDLDVLIGNKLLFKLDVSNYNVTSVNPNYTVKDAMSEAEF
                     VDKYKTKLEAHKAMNDDRTENSHDAKPTPSVCTNSQKCGSTQTSVPLEVGSNTSYTPP
                     KKIIKQEPSGSPVSAKSTTSKAKRNLNANAVPLNI"
     misc_feature    103..417
                     /gene="LOC139841122"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(103..105,289..291,295..297,301..303,364..366)
                     /gene="LOC139841122"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(118..126,181..192,196..198,217..225,229..231,
                     286..288,313..321,340..348)
                     /gene="LOC139841122"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
     misc_feature    550..1026
                     /gene="LOC139841122"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(562..564,910..912,916..918,922..924,991..993)
                     /gene="LOC139841122"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(577..585,757..768,772..774,790..798,802..804,
                     907..909,928..936,964..972)
                     /gene="LOC139841122"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggttgata ttcctgcttc tgaatggcgt ggcagttcta gtttgaactt cataccattc
       61 aatgatctta ttacttgcaa acttgcagaa tgtgtaactg cagatataat tggtagaatt
      121 acatacataa gtccagaaaa ggcctatggt gattctggag aggaatcatc taagtatatt
      181 actcttgagt tgaaagactt ggagggtgct aatctaagct gtactttgtg gtccaagtat
      241 aaagatgatt ttttagcaaa gagagaaaaa gttggtgata atgaatgtgt tattttgctt
      301 attcaatttg gaaggacaaa gaagtttgat gaacaactaa ctgttcgttt agattggaca
      361 ttcacacgaa ttctcattaa cccaaactgt gtagaagcca atgactttat aaagagcatt
      421 ttggagactc atgcaaactc tgaagcaaca gaatctttgg caccgtcctc tgaaccagct
      481 gaggatccgg ttgaagcttg gtttaagcac actaaatcta tagaatgtgt tgatttacct
      541 ttttgtgatc ctggtgtata tgtcgtgcac gcaaaaatca tttctgtgct cccagatgat
      601 ccatggtggt acattggttg caagaaacat cacaagaagg ccagccctga agttgaaaat
      661 atcgacttaa ctttggatgt cgatgcacag ttagctctac ctagaaagtg tgtaaagtgt
      721 gtttcaaatc caagtgtggc acttaggtac aaagtgagtg ttcgtattga agacttgacc
      781 gacacagcca ccgttacttt gtttgagact caagtttgta aatttgttac taagtcagca
      841 tatgagctac aaatatcttt accgaattgc cacgattttc cagatgattt ggatgttctt
      901 attggtaaca agcttttgtt caagttggat gtgtccaact acaacgtaac tagcgtaaat
      961 ccaaactata ctgtgaagga tgcaatgtca gaagctgagt ttgtggataa atataagact
     1021 aaacttgaag ctcataaggc tatgaatgat gacaggacgg aaaatagtca tgatgcaaaa
     1081 cctactcctt ctgtatgcac taattctcaa aagtgtggtt ccactcaaac atctgttccg
     1141 cttgaggttg gatctaacac aagctacacc ccacctaaga agattatcaa acaagaacca
     1201 agtggtagcc ctgtttctgc gaagtctaca acaagcaagg caaagaggaa tctcaatgct
     1261 aatgcagttc cgttgaacat ttag
//
LOCUS       XM_071831356             426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841123), mRNA.
ACCESSION   XM_071831356
VERSION     XM_071831356.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..426
                     /gene="LOC139841123"
                     /note="uncharacterized LOC139841123; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841123"
     CDS             1..426
                     /gene="LOC139841123"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687457.1"
                     /db_xref="GeneID:139841123"
                     /translation="MLLRNVDKSKGLCNGTRLIVERLADNNIEARIITGHCFGQLTYI
                     PRMIVEPTDKNIAIKFRRRQFPDNVCFAMTINKSQGQSLSNVGLYIRKPVFTHGQHYV
                     AVSRVTSKKGLKVLILDEDGNVSHTTRNVVYKEVLQSIK"
     misc_feature    <1..363
                     /gene="LOC139841123"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; Region: RecD; COG0507"
                     /db_xref="CDD:440273"
ORIGIN      
        1 atgttgctac gtaacgttga caagtcaaag ggcttgtgta atggtacaag gttaatagtt
       61 gaaaggcttg cagataataa tattgaagca agaataataa ctggtcactg ttttggccaa
      121 ttaacctaca ttccaagaat gattgtagaa cctacagaca agaatattgc aatcaaattc
      181 cgtaggcgtc agtttccaga taatgtttgc tttgcgatga cgataaacaa aagtcaagga
      241 caatcactct caaatgttgg cttatatata cgaaaaccgg tcttcactca cggtcaacat
      301 tatgttgcag tgtctcgtgt tacaagcaag aaaggactga aggtgcttat attggatgag
      361 gatggaaacg tttcacacac gacgaggaat gtggtataca aagaagtgtt acagtctatc
      421 aaatag
//
LOCUS       XM_071831357            3429 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841124), mRNA.
ACCESSION   XM_071831357
VERSION     XM_071831357.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3429
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3429
                     /gene="LOC139841124"
                     /note="uncharacterized LOC139841124; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139841124"
     CDS             1..3429
                     /gene="LOC139841124"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687458.1"
                     /db_xref="GeneID:139841124"
                     /translation="MPPPNTEEFDMFNYGVENVCKIKEGDHPFEISVVASSDSDGEKD
                     GDEDEEDQYEEEKQDLFWNMPPLLSQQEQEPEFTTQTPTTYRVSDLINVRQTFLNKAE
                     FINTLFTKCLEENFQIKPVKTDKSRYTANCVLPNCEWKISAYKIRNTENFMQEGLGGG
                     GDDEGGESCSSNGRGFAFMLALLRIAFVTLFACLRSRMKVSSDSPRNSSSNPYSIEFG
                     TVDELQGLLDSVNPLVQMFRMARGRYEFNQAEPIRIKLIGRTDKDGRTYNLPTADEVE
                     ALIVGDIDGTNDKRDIILEKKVDEVSLILLSRKLLQQFIVDAYTMVENTSLNYLRNNQ
                     KILRVSSLTHLYDAQDSGSSEVSDIGNRVVLPSSFTGGARYMRENYLDAMAIVRAFGH
                     PDLFITFTCNPKWPEILRFLTEDDLKPEDRPDIITGVYKIKLDQLIALLKDEYLFGKS
                     LGVVAVIEFQKRGLPHCHLCLFMDKEGRVPTSADIDKIICAEIPDKEEDQDLYSIVAD
                     FMMHGPCGTDHPTCPCMIKYKCSKYFPKEFSNETHFDGQGFPVYKRRDDGHFIMKGDT
                     PLDNRNVVAYNKQLSKQFQSHINVEWCNQIGSIKYLFKYINKGPDRISVRIENSDGGK
                     SNQKEKQGKDEIADYYSCRYISACEAARRLFNFPTIYRTPAVYRLSFHLPNHEPIYYD
                     GDEDFESVLSKPTVGASQFIEWMNCNKIDQHARQYTYLEFPRYYVWNSGPRHWTRRRS
                     QLVVARIHFVPLKSGETYYLRILLNKVKGPTCFEDIRTVNGILYDTFKEACYALGLLD
                     DDREYVASIKETHAWASGEFCRSLFVSLITTDSLSFPDCVWNATCDLVSDDLHHECPP
                     HVSTTGSTLKNIPNMPFPDYEFINYTCNMLIHDEMAYDRETLEQDLERYLSTMTVEQR
                     SVYDQIIDVVSVDAGGLFFLFAIPINVLEDSFCNIQPDSELAALLNKAKLIIWDEAPM
                     MHRHCYEAFDRTMRDIIKSANKKMPFGGKVVVFGGDFRQILPVVHKGNRAEIVNASLH
                     SSDLWHHYWILKIGEGKINLPNDGEADIIFPDEVLIPSHDNHIQNIVDSIYPSLHSDL
                     GDPNFFQNKAILAPTNKEVDSINDAVLASIDEEKRVYYSSDSLSPDEVDDLFAQ"
     misc_feature    277..459
                     /gene="LOC139841124"
                     /note="MuDR family transposase; Region: DBD_Tnp_Mut;
                     pfam03108"
                     /db_xref="CDD:427142"
     misc_feature    910..1407
                     /gene="LOC139841124"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    2725..3411
                     /gene="LOC139841124"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atgccacctc caaacactga agagtttgat atgtttaact atggtgttga aaacgtatgt
       61 aaaattaaag aaggagacca cccgtttgag atatctgttg tcgcatctag tgattcagat
      121 ggagaaaaag atggagacga agacgaagaa gatcaatatg aagaagaaaa gcaagattta
      181 ttctggaata tgccacctct attgagtcag caagagcaag agcctgaatt tacgactcaa
      241 acacctacca cgtatagggt atcagattta attaatgttc gtcaaacttt tttgaacaag
      301 gccgagttca taaacactct atttacaaaa tgtcttgaag aaaacttcca aattaagcct
      361 gtaaagacgg acaaatctcg atacaccgct aattgtgtgt taccaaactg tgaatggaaa
      421 attagtgctt acaaaatacg gaacactgaa aactttatgc aagaggggtt aggtggtggt
      481 ggagatgatg aaggaggaga atcttgtagt agtaatggaa gagggtttgc gtttatgctt
      541 gcgttgttgc gaatcgcctt tgtgacttta tttgcgtgtt tgcgaagtcg gatgaaagtg
      601 tcgagtgaca gtccgaggaa tagcagttca aacccatatt ctattgaatt tggtactgtc
      661 gatgaactac aagggttatt agattctgta aatcctttag ttcaaatgtt ccgtatggct
      721 agaggtaggt atgaatttaa ccaagcagaa cccatacgca tcaaattaat tggacggaca
      781 gataaagatg gtagaacgta taatcttccg actgccgatg aagttgaagc tcttatagtc
      841 ggcgatatag atggaactaa tgacaagaga gacattatat tggaaaaaaa ggtcgatgaa
      901 gtttctctga ttctgttgtc tcggaaattg ttgcagcaat ttatagtgga tgcctacact
      961 atggtggaga acactagctt gaactaccta cgtaataatc aaaaaattct acgtgtctca
     1021 tctctcacac acctttatga tgctcaagat tctggtagta gcgaggtttc tgacattggt
     1081 aatcgtgttg tattaccatc ttccttcact ggaggagcca gatatatgcg ggaaaattat
     1141 ttggacgcaa tggctattgt tcgagcattt ggacaccccg atttatttat aacattcacg
     1201 tgcaatccaa aatggcccga aattctcaga tttttaaccg aagatgatct aaaacctgag
     1261 gataggcctg acataattac cggggtgtat aagattaagt tagatcaact aatagctctt
     1321 ttgaaggatg aatacctttt tggtaaatct ttgggagttg tggctgtcat agaatttcag
     1381 aagcgtggac ttcctcattg ccatctgtgt ttatttatgg ataaagaagg tcgggttcca
     1441 acttctgcag atatagacaa gattatttgt gctgaaattc cggacaaaga agaagatcaa
     1501 gatttatatt caattgtggc agatttcatg atgcatggtc catgtggaac agatcaccct
     1561 acatgtccat gtatgataaa atataagtgt tctaagtatt ttccaaagga gttttccaac
     1621 gaaactcact ttgatggtca aggtttccca gtgtataaac ggcgtgatga tggtcatttt
     1681 attatgaaag gagatactcc actcgacaac aggaacgtcg ttgcctacaa taagcaacta
     1741 tcgaaacagt ttcaatcaca catcaatgtt gaatggtgca accaaattgg ctcgattaaa
     1801 taccttttta aatacataaa taaagggccc gacagaatat ctgtgcgaat agaaaattca
     1861 gatggcggaa aatcaaacca aaaggaaaag caaggaaaag atgagattgc agactattac
     1921 agttgtcgtt acatttcagc ttgtgaggcg gcccgacgat tattcaattt tccaactata
     1981 taccgaacac ctgcagtcta tcgactttcc tttcacttac ctaatcatga gcccatttat
     2041 tatgacggcg atgaagattt tgaatctgta ctttcaaagc ctacggttgg agcttctcag
     2101 tttattgaat ggatgaactg taataaaata gatcagcatg ctcgacagta tacatacttg
     2161 gaatttccaa gatattatgt ctggaattca ggcccgagac actggacaag acgtagatca
     2221 cagcttgttg ttgctagaat acacttcgtt cctctgaagt ctggtgaaac gtattatctg
     2281 aggatacttc tgaacaaagt caagggaccc acttgctttg aggatattag gacagtcaac
     2341 ggcatactat atgatacttt taaggaggca tgctacgccc tgggactttt agacgatgat
     2401 cgggaatatg ttgcatctat taaagagaca catgcttggg catccggaga attttgtcga
     2461 tctttgtttg tgtctttgat aacaaccgat agtctatcct tccctgactg tgtttggaat
     2521 gcaacttgtg atctagtttc tgacgaccta catcatgaat gtcctcctca tgtatcaact
     2581 accgggagta ctctaaagaa tatccctaat atgccttttc ctgattacga gttcataaat
     2641 tatacgtgca atatgcttat tcatgatgag atggcttatg atagggaaac acttgaacaa
     2701 gatctagaaa gatatctgtc tacaatgacg gttgagcaaa ggtcagtata cgatcagatt
     2761 attgatgttg tttcagttga tgcgggtggc ctattcttcc tgtttgctat acctattaat
     2821 gttctggaag attctttttg taatatacaa ccggatagtg aattagctgc attattgaac
     2881 aaggcaaaat taatcatatg ggatgaagct cccatgatgc acagacactg ttatgaagct
     2941 tttgatcgca ctatgcggga cataatcaag tcagcgaata agaaaatgcc gtttggtggt
     3001 aaagtcgtgg tgttcggtgg agatttcagg cagatccttc cagttgtaca taaaggaaac
     3061 agagcagaaa tagtaaatgc ttcgctgcat tcatctgact tgtggcatca ttattggatt
     3121 ttgaaaattg gtgaaggaaa gattaatctt ccgaatgatg gagaagctga cattattttt
     3181 cccgatgaag tattaattcc ttcacatgac aatcatatac agaacattgt ggattctatt
     3241 tatcctagcc ttcacagcga tcttggtgat cccaattttt ttcaaaacaa agccatactt
     3301 gctccaacaa ataaggaagt tgattctatt aatgatgctg tgttggcctc cattgatgaa
     3361 gaaaaaagag tctactacag ttcggacagc ctaagtccag acgaagttga tgatttattt
     3421 gcacaataa
//
LOCUS       XM_071831358             642 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841125), mRNA.
ACCESSION   XM_071831358
VERSION     XM_071831358.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..642
                     /gene="LOC139841125"
                     /note="uncharacterized LOC139841125; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841125"
     CDS             1..642
                     /gene="LOC139841125"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687459.1"
                     /db_xref="GeneID:139841125"
                     /translation="MAAVFEPTPLNLLTIDVNGAVVRVKVFVTWKKTYFNNPNSAMSL
                     EMILVDAQGNKIRASVPKRWISFYEPTFVEGKYLELSNFGVVDSDDKVKLIPNALKIS
                     IFRSTTITVCPLFDIATEGFSPVHFQELLEWRFSKDAVFVVLQLGALWAHHATRVFEY
                     VSARKNDIDSIVLLMHNCKLREWQGVPQVSNQLWGCRVYINDDIPAINRFKAE"
     misc_feature    64..327
                     /gene="LOC139841125"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(76..84,133..144,148..150,169..177,181..183,226..228,
                     250..258,298..306)
                     /gene="LOC139841125"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
     misc_feature    order(229..231,235..237,241..243,322..324)
                     /gene="LOC139841125"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239926"
ORIGIN      
        1 atggctgcag tttttgaacc tactcctttg aacttattga caattgatgt taatggtgct
       61 gttgttaggg ttaaggtttt tgtcacatgg aaaaaaacct atttcaataa ccccaactca
      121 gcaatgtcat tggagatgat tctagtcgat gctcagggca ataaaattcg agcttctgta
      181 ccgaagaggt ggatttcgtt ttatgagccg actttcgttg agggcaagta tctggaattg
      241 tccaactttg gggttgttga ctctgatgat aaggtgaagt taatacctaa tgcacttaag
      301 ataagcatct ttagatcgac tactattact gtgtgtcctt tgttcgacat tgcaaccgag
      361 ggcttcagcc cggttcattt tcaagagctg ttggagtgga gattttcaaa agatgcagta
      421 tttgtggtat tgcaattagg tgccttatgg gctcaccatg caactagagt ttttgagtac
      481 gtgtctgcta gaaagaatga tatcgactcc attgttctac ttatgcacaa ttgtaaatta
      541 agagagtggc aaggtgttcc acaagtgagt aaccagctct ggggttgtcg tgtgtatatt
      601 aacgatgata tacctgctat caaccgcttt aaggctgagt aa
//
LOCUS       XM_071831359            1284 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841126), mRNA.
ACCESSION   XM_071831359
VERSION     XM_071831359.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1284
                     /gene="LOC139841126"
                     /note="uncharacterized LOC139841126; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841126"
     CDS             1..1284
                     /gene="LOC139841126"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687460.1"
                     /db_xref="GeneID:139841126"
                     /translation="MVDIPASEWRGSSGFNFIPFNDLITCKLAEGVTADIIGRVTYIS
                     PEKAYGDSREESSKYITLELKDLEGANLSCTLWSKYKDDFLAKREKVGDNECVILLIQ
                     FGRTKKFDEQLTVHLDWTFTRILINPDCVEANDFIKSILETHANSEATESLAPSSEPA
                     EDPVEAWFKHTKSIECVDLPFCDPGVYVVHAKIISVLPDDPWWYIGCKKHHKKANPEV
                     ENIDLTLDVDAQLALPRKCVKCVSNPSVALRYKVSVRIENLTDTATVTLFETQVCKFI
                     TKSAYDLQISLPNGHDFPGDSDVLIGNKLLFKLDVSNYNVTSVNPNYTVKDAMSEAEF
                     VDKYKTKLEAHKAMNDDRTENSHDAKPTPSVCTNSQKCGSTQTSASLEVGSNTSYTPP
                     KKIIKQEPSGSPVSAKSTTSKAKRNLNANAVPLNI"
     misc_feature    103..417
                     /gene="LOC139841126"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(103..105,289..291,295..297,301..303,364..366)
                     /gene="LOC139841126"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(118..126,181..192,196..198,217..225,229..231,
                     286..288,313..321,340..348)
                     /gene="LOC139841126"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
     misc_feature    550..1026
                     /gene="LOC139841126"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(562..564,910..912,916..918,922..924,991..993)
                     /gene="LOC139841126"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(577..585,757..768,772..774,790..798,802..804,
                     907..909,928..936,964..972)
                     /gene="LOC139841126"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggttgata ttcctgcttc tgaatggcgt ggcagttctg gtttcaactt cataccattc
       61 aatgatctta ttacttgcaa acttgcagaa ggtgtaactg cagatataat tggtagagtt
      121 acatacataa gtccagaaaa ggcctatggt gattctcgag aggaatcatc caagtatatt
      181 actcttgagt tgaaagactt ggagggtgct aatctaagct gtactttgtg gtccaagtat
      241 aaagatgatt ttttagcaaa gagagaaaaa gttggtgata atgaatgtgt tattttgctt
      301 attcaatttg gaaggacaaa gaagtttgat gaacaactaa ctgttcattt agattggaca
      361 ttcacacgaa ttctcattaa cccagactgt gtagaagcca atgactttat aaagagcatt
      421 ttggagactc atgcaaactc tgaagcaacg gaatctttgg caccgtcctc tgaaccagct
      481 gaggatccgg ttgaagcttg gtttaagcac actaaatcta tagaatgtgt tgatttacct
      541 ttttgtgatc ctggtgtata tgtcgtgcac gcaaaaatta tttctgtgct cccagatgat
      601 ccatggtggt acattggttg caagaaacat cacaagaagg ccaaccctga agttgaaaat
      661 atcgacttaa ctttggatgt cgatgcacag ttagctctac ctagaaagtg tgtaaagtgt
      721 gtttcaaatc caagtgtggc acttaggtac aaagtgagtg ttcgtattga aaacttgacc
      781 gacacagcca ccgttacttt gtttgagact caagtttgta aatttattac taagtcagca
      841 tatgatctac aaatatcttt accgaatggc cacgattttc caggtgattc ggatgttctt
      901 attggtaaca agcttttgtt caagttggat gtgtccaact acaacgtgac tagcgtaaat
      961 ccaaactaca ctgtgaagga tgcaatgtca gaagctgagt ttgtggataa atataagact
     1021 aaacttgaag ctcataaggc tatgaatgat gacaggacgg aaaatagtca tgatgcaaaa
     1081 cctactcctt ctgtatgcac taattctcaa aagtgtggtt ccactcaaac atctgcttcg
     1141 cttgaggttg gatctaacac aagctacacc ccacctaaga agattatcaa acaagaacca
     1201 agtggtagcc ctgtttctgc gaagtctaca acaagcaagg caaagaggaa tctcaatgct
     1261 aatgcagttc cgttgaacat ttag
//
LOCUS       XM_071831360             981 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent DNA helicase
            RRM3-like (LOC139841127), mRNA.
ACCESSION   XM_071831360
VERSION     XM_071831360.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..981
                     /gene="LOC139841127"
                     /note="ATP-dependent DNA helicase RRM3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841127"
     CDS             1..981
                     /gene="LOC139841127"
                     /codon_start=1
                     /product="ATP-dependent DNA helicase RRM3-like"
                     /protein_id="XP_071687461.1"
                     /db_xref="GeneID:139841127"
                     /translation="MPFPDYEFINYTYNMLIHDEMAYDRETLEQDLERYLSTMTIEQR
                     SVYDQIIDVVSVDAAAVHARGDIVINVASSGIAALLLTDGRTTHSRFAIPINVLEDSF
                     CNIQPDSELAALLNKAKLIIWDEAPMMHRHCFEAFDRTMRDIIKSANKKMPFGGKFVV
                     FGGDFRQILPVVHKRNRAEIVNASLHSSDLWHHCKVLTLTKNMRLNGGENELEKKEIS
                     DFADWILKIGEGKINLPNDGEADIIFPDEVLIPSHDNHIQNIVDSIYPSLHSDLGDPN
                     FFQNKAILAPTNEEVDSINDAVLASIDEEERVYYSSDSLSPDEVDDLFAQ"
     misc_feature    115..963
                     /gene="LOC139841127"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
ORIGIN      
        1 atgccttttc ctgattacga gttcataaat tatacgtaca atatgcttat tcatgatgag
       61 atggcttatg atagggaaac acttgaacaa gatctagaaa gatatctgtc tacaatgacg
      121 attgagcaaa ggtcagtata cgatcagatt attgatgttg tttcagttga tgcggccgcc
      181 gttcatgctc gtggtgatat agttattaac gtcgcatcaa gcggtatagc tgctttattg
      241 ttaaccgacg gtaggactac acattctagg tttgctatac ctattaatgt tctggaagat
      301 tctttttgta atatacaacc ggatagtgaa ttagctgcat tattgaacaa ggcaaaatta
      361 atcatatggg atgaagctcc catgatgcac agacactgtt ttgaagcttt tgatcgcact
      421 atgcgggaca taatcaagtc agcgaataag aaaatgccgt ttggtggtaa attcgtggtg
      481 ttcggtggag atttcaggca gatccttcca gttgtacata aaagaaatag agcagaaata
      541 gtaaatgctt cgctgcattc atctgacttg tggcatcatt gtaaggtact tacactaact
      601 aaaaatatgc gcttgaatgg tggcgagaat gaattggaaa aaaaagagat tagtgacttt
      661 gcagattgga ttttgaaaat tggtgaagga aagattaatc ttccgaatga tggagaagct
      721 gacattattt ttcccgatga agtattaatt ccttcacatg acaatcatat acagaacatt
      781 gtggattcta tttatcctag ccttcacagc gatcttggtg atcccaattt ttttcaaaac
      841 aaagccatac ttgctccaac aaatgaggaa gttgattcta ttaatgatgc tgtgttagcc
      901 tccattgatg aagaagaaag agtctactac agttcggaca gcctaagtcc agacgaagtt
      961 gatgatttat ttgcacaata a
//
LOCUS       XM_071831361            1635 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841128), mRNA.
ACCESSION   XM_071831361
VERSION     XM_071831361.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1635
                     /gene="LOC139841128"
                     /note="uncharacterized LOC139841128; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841128"
     CDS             1..1635
                     /gene="LOC139841128"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687462.1"
                     /db_xref="GeneID:139841128"
                     /translation="MAENTSLNYLRNNQKILRVSSLTHLYDAQDSGSSEVSNIGNRVV
                     LPSSFTGGARYMRENYLDAMAIVRAFGHPDLFITFTCNPKWPEILRFLTEDDLKPEDR
                     PDIITGDEYLFGKSLGVVAVIEFQKRGLPHCHLCLFMDKEGRVPTSADIDKIICAEIP
                     DKEEDPDLYSIVADFIMHGPCGTDHPTCPCMIKYKCSKYFPKEFSNETHFDGQGFPVY
                     KRRDDGHFIMKGDTPLDNRNVVAYKKQLSKQFQSHINVEWCNQIGSIKYLFKYINKGP
                     DRISVRIENSDGGKSIQKKKQGKDEIADYYSCRYISACEAARRLFNFPTIYLTPAVYR
                     LSFHLPNHEPIYYDGEEDFESVLSKPTVGASQFIEWMNCNKIDQHARQYTYLEFPRYY
                     VWNSGPRHWTRRKSQLVVARIHFVPPKSGETYYLRILLNKVKGPTCFEDIRTVNGILY
                     DTFKEACYTLGLLDDDREYVASIKDTHAWASGEFCRSLFVSLITTDSLSFPDCVWNET
                     CDLLSDDLHHECPPHVSTTDEAELKKVLYNLVLSKI"
     misc_feature    1..405
                     /gene="LOC139841128"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atggcggaga acactagctt gaactaccta cgtaataatc aaaaaattct acgtgtctca
       61 tctctcacac acctttatga tgctcaagat tctggtagta gcgaggtttc taacatcggt
      121 aatcgtgttg tattaccatc ttccttcact ggaggagcca gatatatgcg ggaaaattat
      181 ttggacgcaa tggctattgt gcgagcattt ggacaccccg atttatttat aacattcacg
      241 tgcaatccaa aatggcccga aattctcaga tttttaaccg aagatgatct aaaacctgag
      301 gataggcctg acataattac cggggatgaa tacctttttg gtaaatcttt gggagttgtg
      361 gctgtcatag aatttcagaa gcgtggactt cctcattgcc atctgtgttt atttatggat
      421 aaagaaggtc gggttccaac ttctgcagat atagacaaga ttatttgtgc tgaaattccg
      481 gacaaagaag aagatccaga tttatattca attgtggcag atttcataat gcatggtcca
      541 tgtggaacag atcaccctac atgtccatgt atgataaaat ataagtgttc taagtatttt
      601 ccaaaggagt tttccaacga aactcacttt gatggtcaag gtttcccagt gtataaacgg
      661 cgtgatgatg gtcattttat tatgaaagga gatactccac tcgacaacag gaacgtcgtt
      721 gcctacaaaa agcaactatc aaaacagttt caatcacaca tcaatgttga atggtgcaac
      781 caaattggct cgattaaata cctttttaaa tacataaata aagggcccga cagaatatct
      841 gtgcgaatag aaaattcaga tggcggaaaa tcaatccaaa agaaaaagca aggaaaagat
      901 gagattgcag actattacag ttgtcgttac atttcagctt gtgaggcggc ccggcgatta
      961 ttcaattttc caactatata cctaacacct gcagtctatc gactttcctt tcacttacct
     1021 aatcatgagc ccatttatta tgacggtgaa gaagattttg aatctgtact ttcaaagcct
     1081 acggttggag cttctcagtt tattgaatgg atgaactgta ataaaataga tcagcatgct
     1141 cgacagtata catacttgga atttccaaga tattatgtct ggaattcagg cccgagacac
     1201 tggacaagac gtaaatcaca gctggttgtt gctagaatac acttcgttcc tccgaagtct
     1261 ggtgaaacgt attatctgag gatacttctg aacaaagtca agggacccac ttgctttgag
     1321 gatattagga cagtcaacgg catactatac gatactttta aggaggcatg ctacaccctg
     1381 ggacttttag acgatgatcg ggaatatgtt gcatctatta aagacacaca tgcttgggca
     1441 tccggagaat tttgtcgatc tttgtttgtg tctttgataa caaccgatag tctatccttc
     1501 cctgactgtg tttggaatga aacttgtgat ctactttctg acgacctaca tcatgaatgt
     1561 cctcctcatg tatcaactac cgatgaagct gaactgaaga aggttttgta caacctcgtg
     1621 ctatcgaaga tttaa
//
LOCUS       XM_071831362            1839 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841129), mRNA.
ACCESSION   XM_071831362
VERSION     XM_071831362.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1839
                     /gene="LOC139841129"
                     /note="uncharacterized LOC139841129; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841129"
     CDS             1..1839
                     /gene="LOC139841129"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687463.1"
                     /db_xref="GeneID:139841129"
                     /translation="MAAVVEPTPLNLLTIDVNGAVVRVKGNKIRASVPKRWISFYEPT
                     FVEGKYLELSNFGVVDCDDKLKLIPNALKISIFRSTTITVCPLFDIATEGFSLVHFQK
                     LLEWRFSKDAVFDVLGALVEMKPMRIKRENGVDNKSLEFTLKDNSGIAIRCALWAHHA
                     TRVFECVSARKNDIDSIVLLMHNCKLREWQEGVSLQSTLGDIQTQTLLEMAIENFNKP
                     EAKNCQEVGDVHEVSLRGRVSNFCDEEAWYTYACNVCHKKVEAIWCIDTTSTKYNCVN
                     CGDVNDVSPRIRVTIEVEDTSGSCSLVVFDTQLSKMMKKSVNWLKMLAECSVDAHVIP
                     NELKELLYKPFVWMIRITDFNLKYNYPGYTVDNVTDDMEVFEAIDTKLKSGATVHTNA
                     STSADITPVKFTKRKPTACKELNEMDEVNKYVLRGKISGVATEDGWISFTCQKCKTMA
                     GPKYGHKSVADGFECSTCGVITGVVQKIRTALEIEDETGRCNLGLFDDSLATLLKLTV
                     EQLQDLAENAVNPTTVPNELNAVLGKQYVFSVRVTDCNIQLNYRGYTVLNLSDSEEEI
                     ALKTPSTSSSTKRKTDHGPDDDEGDTLTGGTGAGIAALKIPRMDDL"
     misc_feature    <73..246
                     /gene="LOC139841129"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(148..150,154..156,160..162,241..243)
                     /gene="LOC139841129"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    343..>600
                     /gene="LOC139841129"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(343..345,529..531,535..537,541..543)
                     /gene="LOC139841129"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(358..366,418..429,433..435,454..462,466..468,
                     520..522,553..561,580..588)
                     /gene="LOC139841129"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
     misc_feature    694..1113
                     /gene="LOC139841129"
                     /note="A subfamily of OB folds corresponding to the
                     C-terminal OB fold, the ssDNA-binding domain (DBD)-C, of
                     human RPA1 (also called RPA70). RPA1 is the large subunit
                     of Replication protein A (RPA). RPA is a nuclear
                     ssDNA-binding protein (SSB) which appears to...; Region:
                     RPA1_DBD_C; cd04476"
                     /db_xref="CDD:239922"
     misc_feature    order(697..699,1030..1032,1036..1038,1042..1044,
                     1105..1107)
                     /gene="LOC139841129"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239922"
     misc_feature    order(712..720,868..879,883..885,901..909,913..915,
                     1027..1029,1048..1056,1084..1092)
                     /gene="LOC139841129"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239922"
     misc_feature    order(715..717,883..888,1012..1017,1021..1029)
                     /gene="LOC139841129"
                     /note="RPA1 DBD-C/RPA2 DBD-D interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:239922"
     misc_feature    order(754..756,763..765,820..822,829..831)
                     /gene="LOC139841129"
                     /note="Zinc binding site [ion binding]; other site"
                     /db_xref="CDD:239922"
     misc_feature    1234..1674
                     /gene="LOC139841129"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(1270..1272,1603..1605,1609..1611,1615..1617)
                     /gene="LOC139841129"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(1285..1293,1441..1452,1456..1458,1474..1482,
                     1486..1488,1600..1602,1621..1629,1657..1665)
                     /gene="LOC139841129"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggctgcag ttgttgaacc tactcctttg aacttattga caattgatgt taatggtgct
       61 gttgttaggg ttaagggcaa taaaattcga gcttctgtac cgaagaggtg gatttcgttt
      121 tatgagccga ctttcgttga gggcaagtat ctggaattgt ccaactttgg ggttgttgac
      181 tgtgatgata agttgaagtt aatacctaat gcacttaaga taagcatctt tagatcgact
      241 actattactg tgtgtccttt gttcgacatt gcaaccgagg gcttcagcct agttcatttt
      301 caaaagctgt tggagtggag attttcaaaa gatgcggttt ttgatgttct tggtgcattg
      361 gttgaaatga aaccaatgcg tatcaaacgt gagaatggag ttgataacaa gtctttggag
      421 tttactctga aagataacag tggtattgca attaggtgtg ccttatgggc tcaccatgca
      481 actagagttt ttgagtgcgt gtctgctaga aagaatgata tcgactccat tgttctactt
      541 atgcacaatt gtaaattaag agagtggcaa gagggagtca gcttacaatc tactcttggt
      601 gatattcaaa cccaaacctt actcgaaatg gcaattgaaa acttcaacaa acctgaggca
      661 aaaaactgtc aggaggttgg agatgttcat gaggttagtt tgaggggtcg agtatcaaac
      721 ttttgtgatg aagaagcttg gtacacgtac gcttgcaacg tgtgtcataa aaaagttgaa
      781 gcaatttggt gtattgacac aacttcaact aaatataatt gtgtgaattg tggtgatgtg
      841 aatgacgttt ctccaagaat cagagttact attgaagttg aagacacatc tggatcatgt
      901 tcattggtgg tatttgatac acaattgtcg aaaatgatga agaaaagtgt gaattggcta
      961 aaaatgttag ctgaatgttc tgttgatgcg catgttattc ctaacgagtt aaaggaatta
     1021 ctgtacaagc ccttcgtgtg gatgatacga atcactgact tcaatctaaa atacaattat
     1081 ccgggctata cggttgataa tgtaactgat gatatggaag tctttgaagc tattgatact
     1141 aagttgaaat ctggagctac tgtgcacacc aatgcttcca cttcagcgga tatcacacct
     1201 gttaagttta ccaagcgtaa accaacagct tgcaaagaat tgaacgagat ggatgaggta
     1261 aacaaatatg ttttgagagg taaaattagt ggggttgcaa ctgaggatgg gtggatttcc
     1321 ttcacttgcc aaaagtgcaa gacaatggct ggaccaaagt acggtcataa gtctgtggct
     1381 gatggatttg aatgtagcac atgtggtgtt attacgggcg ttgttcaaaa aatacgcacg
     1441 gctcttgaaa ttgaggatga gactggtcgc tgtaacttag ggctatttga tgattcacta
     1501 gcaaccttgc tgaaactaac tgttgaacaa ctacaagatt tggctgaaaa tgcagtgaat
     1561 cctaccactg taccaaatga gcttaatgca gttttgggga agcagtatgt cttttcggtc
     1621 cgtgttactg actgcaacat tcaattgaac tatcgtggtt atactgtgtt aaacttatca
     1681 gactctgaag aggaaattgc attgaaaact ccaagcacaa gtagttcaac caaacggaag
     1741 actgaccatg gacctgatga tgatgaaggt gataccctaa ctggtggcac tggtgcagga
     1801 attgcagcct taaaaatacc acgcatggat gatctttga
//
LOCUS       XM_071831363            1215 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841130), mRNA.
ACCESSION   XM_071831363
VERSION     XM_071831363.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1215
                     /gene="LOC139841130"
                     /note="uncharacterized LOC139841130; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841130"
     CDS             1..1215
                     /gene="LOC139841130"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687464.1"
                     /db_xref="GeneID:139841130"
                     /translation="MVDIPASEWRGSSGFNFIPFNDLITCKLAEGVTADIIGRVTYIS
                     PEKAYGDSGEESSKYITLELKDLEGANLSCTLWSKYKDDFFSKESKKQLTVRLDWTFT
                     RILINPNCVEANDFIKSILETHANSEATESLAPSSEPAEDPVEAWFKHTKSIECVDLP
                     FCDPGVYVVHVKIISVLPDDPWWYIGCKKHHKKASPEVENIDLTLDVDAQLALPRKCV
                     SNPSVALRYKVSVRIEDLTDTATVTLFETQVCKFVTKSAYELQISLPNGHDFPDDLDV
                     LIRNKLLFKLDVSNYNVTSVNPNYTVKDAMSEAEFVDKYKTKLEAHKAMNDDRTENSH
                     DAKPTPSVCTNSQKCGSTQTSASLEVGSNTSYTPPKKIIKQEPSGSPVSAKSTTSKAK
                     RNLNANAVPLNI"
     misc_feature    103..357
                     /gene="LOC139841130"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    490..957
                     /gene="LOC139841130"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(502..504,841..843,847..849,853..855,922..924)
                     /gene="LOC139841130"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(517..525,688..699,703..705,721..729,733..735,
                     838..840,859..867,895..903)
                     /gene="LOC139841130"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggttgata ttcctgcttc tgaatggcgt ggcagttctg gttttaactt cataccattc
       61 aatgatctta ttacttgcaa acttgcagaa ggtgtaactg cagatataat tggtagagtt
      121 acatacataa gtccagaaaa ggcctatggt gattctggag aggaatcatc caagtatatt
      181 actcttgagt tgaaagactt ggagggtgct aatctaagct gtactttgtg gtccaagtat
      241 aaagatgatt tttttagcaa agagagtaaa aaacaactaa ctgttcgttt agattggaca
      301 ttcacacgaa ttctcattaa cccaaactgt gtagaagcca atgactttat aaagagcatt
      361 ttggagactc atgcaaactc tgaagcaacg gaatctttgg caccgtcctc tgaaccagct
      421 gaggatccgg ttgaagcttg gtttaagcac actaaatcta tagaatgtgt tgatttacct
      481 ttttgtgatc ctggtgtata tgtcgtgcac gtaaaaatca tttctgtgct cccagatgat
      541 ccatggtggt acattggttg caagaaacat cacaagaagg ccagccctga agttgaaaat
      601 atcgacttaa ctttggatgt cgatgcacag ttagctctac ctagaaagtg tgtttcaaat
      661 ccaagtgtgg cacttaggta caaagtgagt gttcgtattg aagacttgac cgacacagcc
      721 accgttactt tgtttgagac tcaagtttgt aaatttgtta ctaagtcagc atatgagcta
      781 caaatatctt taccgaatgg ccacgatttt ccagatgatt tggatgttct tattcgtaac
      841 aagcttttgt tcaagttgga tgtgtccaac tacaacgtaa ctagcgtaaa tccaaactac
      901 actgtgaagg atgcaatgtc agaagctgag tttgtggata aatataagac taaacttgaa
      961 gctcataagg ctatgaatga tgacaggacg gaaaatagtc atgatgcaaa acctactcct
     1021 tctgtatgca ctaattctca aaagtgtggt tccactcaaa catctgcttc gcttgaggtt
     1081 ggatctaaca caagctacac cccacctaag aagattatca aacaagaacc aagtggtagc
     1141 cctgtttctg cgaagtctac aacaagcaag gcaaagagga atctcaatgc taatgcagtt
     1201 ccgttgaaca tttag
//
LOCUS       XM_071831364            1251 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841131), mRNA.
ACCESSION   XM_071831364
VERSION     XM_071831364.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1251
                     /gene="LOC139841131"
                     /note="uncharacterized LOC139841131; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841131"
     CDS             1..1251
                     /gene="LOC139841131"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687465.1"
                     /db_xref="GeneID:139841131"
                     /translation="MPFPNYEFINYTCNMLIHDEMAYDRETLEQDLERYLSTMTVEQR
                     SVYDQIIDAVSVDASGLFFLYGYGGTGKTYVWKTLAAAVRARGDIVINVVSSGIAALL
                     LTGGRTAHSRFAIPINVLEDSFCNIQPDSELAALLNKEKLIIWDEAPMMHIHCFEAFD
                     RTMRDIIKSANKKLPFGGKVVVFGGDFRQILPVIHKGNRAEIVNASLHSSDLWHHCKV
                     LTLTKNMRLNGGENGLGKKDISDFADWILKIGEGRINLSNDGEADIIFPDEILIPSHD
                     NHIQNIVDSIYPSLYSDLGDPNFFQNKAILAPTNEEVDSINDDVLASIDEEERVYYSL
                     DSLSPDEVDDLFVQSLYSPEILNGLKVPGVPNHRLVLKKGVPIMLLRNVDQSKGLCNG
                     TRLIVERLADNNIEARIITGHCFG"
     misc_feature    115..1200
                     /gene="LOC139841131"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(202..222,436..438)
                     /gene="LOC139841131"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgccttttc ctaattacga gttcataaat tatacgtgca atatgcttat tcatgatgag
       61 atggcttatg atagggaaac acttgaacaa gatctagaaa gatatctgtc tacaatgacg
      121 gttgagcaaa ggtcagtata cgatcagatt atagatgctg tttcagttga tgcgagtggc
      181 ctattcttcc tgtacggtta tggaggaact ggaaagactt atgtttggaa aacacttgca
      241 gccgccgttc gtgctcgtgg tgatatagtt attaacgtcg tatcaagcgg tatagctgct
      301 ttattgttaa ctggcggtag gactgcacat tctaggtttg ctatacctat taatgttctg
      361 gaagattctt tttgtaatat acaaccggat agtgaattag ctgcattatt gaacaaggaa
      421 aaattaatca tatgggatga agctcccatg atgcacatac actgttttga agcttttgat
      481 cgcactatgc gggacataat caagtcagcg aataagaaat tgccgtttgg tggtaaagtc
      541 gtggtgttcg gtggagattt caggcagatc cttccagtta tacataaagg aaacagagca
      601 gaaatagtaa atgcttcgct gcattcatct gacttgtggc atcattgtaa ggtacttaca
      661 ctaactaaaa atatgcgctt gaatggtggt gagaatggat tgggaaaaaa agatattagt
      721 gactttgcag attggatttt gaaaattggt gaaggaagga ttaatctttc aaatgatgga
      781 gaagctgaca ttatttttcc cgatgagata ttaattccat cacatgataa tcatatacag
      841 aacattgtgg attctattta tcctagcctt tacagcgatc ttggtgatcc caattttttt
      901 caaaacaaag ccatacttgc tccaacaaat gaggaagttg attctattaa tgatgatgtg
      961 ttggcctcca ttgatgaaga agaaagagtc tactacagtt tagacagcct aagtccagac
     1021 gaagttgatg atttatttgt acaatcattg tattcaccag aaattttaaa tggtttgaaa
     1081 gtaccaggtg ttcccaatca caggcttgtt ttgaagaagg gagtgcctat aatgttgcta
     1141 cgtaacgttg accagtcaaa gggcttgtgt aatggtacaa ggttaatagt tgaaaggctt
     1201 gcagataata atattgaagc aagaataata actggtcact gttttggcta a
//
LOCUS       XM_071831365            1242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841133), mRNA.
ACCESSION   XM_071831365
VERSION     XM_071831365.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1242
                     /gene="LOC139841133"
                     /note="uncharacterized LOC139841133; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841133"
     CDS             1..1242
                     /gene="LOC139841133"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687466.1"
                     /db_xref="GeneID:139841133"
                     /translation="MVDIPASEWRGSSGFNFIPFNDLITCKLAEGVTADIIGRVTYIS
                     PEKAYGDSGEESSKYITLELKDLDIKMIFLAKRVKVGDNECVILLIQFGRTKKFDEQL
                     TVRLDWTFTRILINPNCVEANDFIKSILETHANSEATESLAPSSEPAEDPVEAWFKHT
                     KSIECVDLPFCDPGVYVVHVKIISVLPDDPWWYIGCKKHHKKASPEVENIDLTLDVDA
                     QLALPRKCVSNPSVALRYKVSVRIEDLTDTATVTLFETQVCKFVTKSAYELQISLPNG
                     HDFPDDLDVLIRNKLLFKLDVSNYNVTSVNPNYTVKDAMSEAEFVDKYKTKLEAHKAM
                     NDDRTENSHDAKPTPSVCTNSQKCGSTQTSASLEVGSNTSYTPPKKIIKQEPSGSPVS
                     AKSTTSKAKRNLNANAVPLNI"
     misc_feature    103..384
                     /gene="LOC139841133"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(103..105,256..258,262..264,268..270,331..333)
                     /gene="LOC139841133"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    517..984
                     /gene="LOC139841133"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(529..531,868..870,874..876,880..882,949..951)
                     /gene="LOC139841133"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(544..552,715..726,730..732,748..756,760..762,
                     865..867,886..894,922..930)
                     /gene="LOC139841133"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggttgata ttcctgcttc tgaatggcgt ggcagttctg gttttaactt cataccattc
       61 aatgatctta ttacttgcaa acttgcagaa ggtgtaactg cagatataat tggtagagtt
      121 acatacataa gtccagaaaa ggcctatggt gattctggag aggaatcatc caagtatatt
      181 actcttgagt tgaaagactt ggatataaag atgatttttt tagcaaagag agtaaaagtt
      241 ggtgataatg aatgtgttat tttgcttatt caatttggaa ggacaaagaa gtttgatgaa
      301 caactaactg ttcgtttaga ttggacattc acacgaattc tcattaaccc aaactgtgta
      361 gaagccaatg actttataaa gagcattttg gagactcatg caaactctga agcaacggaa
      421 tctttggcac cgtcctctga accagctgag gatccggttg aagcttggtt taagcacact
      481 aaatctatag aatgtgttga tttacctttt tgtgatcctg gtgtatatgt cgtgcacgta
      541 aaaatcattt ctgtgctccc agatgatcca tggtggtaca ttggttgcaa gaaacatcac
      601 aagaaggcca gccctgaagt tgaaaatatc gacttaactt tggatgtcga tgcacagtta
      661 gctctaccta gaaagtgtgt ttcaaatcca agtgtggcac ttaggtacaa agtgagtgtt
      721 cgtattgaag acttgaccga cacagccacc gttactttgt ttgagactca agtttgtaaa
      781 tttgttacta agtcagcata tgagctacaa atatctttac cgaatggcca cgattttcca
      841 gatgatttgg atgttcttat tcgtaacaag cttttgttca agttggatgt gtccaactac
      901 aacgtaacta gcgtaaatcc aaactacact gtgaaggatg caatgtcaga agctgagttt
      961 gtggataaat ataagactaa acttgaagct cataaggcta tgaatgatga caggacggaa
     1021 aatagtcatg atgcaaaacc tactccttct gtatgcacta attctcaaaa gtgtggttcc
     1081 actcaaacat ctgcttcgct tgaggttgga tctaacacaa gctacacccc acctaagaag
     1141 attatcaaac aagaaccaag tggtagccct gtttctgcga agtctacaac aagcaaggca
     1201 aagaggaatc tcaatgctaa tgcagttccg ttgaacattt ag
//
LOCUS       XM_071831366            1251 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841134), mRNA.
ACCESSION   XM_071831366
VERSION     XM_071831366.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1251
                     /gene="LOC139841134"
                     /note="uncharacterized LOC139841134; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841134"
     CDS             1..1251
                     /gene="LOC139841134"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687467.1"
                     /db_xref="GeneID:139841134"
                     /translation="MPFPNYEFINYTCNMLIHDEMAYDRETLEQDLERYLSTMTVEQR
                     SVYDQIIDAVSVDAGGLFFLYGYGGTGKTYVWKTLAAAVRARGDIVINVVSSGIAALL
                     LTGGRTAHSRFAIPINVLEDSFCNIQPDSELAALLNKEKLIIWDEAPMMHIHCFEAFD
                     RTMRDIIKSANKKLPFGGKVVVFGGDFRQILPVIHKGNRAEIVNASLHSSDLWHHCKV
                     LTLTKNMRLNGGENGLGKKDISDFADWILKIGEGRINLSNDGEADIIFPDEILIPSHD
                     NHIQNIVDSIYPSLHSDLGDPHFFQNKAILAPTNEEVDSINDDVLASIDEEERVYYSL
                     DSLSPDEVDDLFVQSLYSPEILNGLKVPGVPNHRLVLKKGVPIMLLRNVDQSKGLCNG
                     TRLIVERLADNNIEARIITGHCFG"
     misc_feature    115..1200
                     /gene="LOC139841134"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(202..222,436..438)
                     /gene="LOC139841134"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgccttttc ctaattacga gttcataaat tatacgtgca atatgcttat tcatgatgag
       61 atggcttatg atagggaaac acttgaacaa gatctagaaa gatatctgtc tacaatgacg
      121 gttgagcaaa ggtcagtata cgatcagatt attgatgctg tttcagttga tgcgggtggc
      181 ctattcttcc tgtacggtta tggaggaact ggaaagactt atgtttggaa aacacttgca
      241 gccgccgttc gtgctcgtgg tgatatagtt attaacgtcg tatcaagcgg tatagctgct
      301 ttattgttaa ctggcggtag gactgcacat tctaggtttg ctatacctat taatgttctg
      361 gaagattctt tttgtaatat acaaccggat agtgaattag ctgcattatt gaacaaggaa
      421 aaattaatca tatgggatga agctcccatg atgcacatac actgttttga agcttttgat
      481 cgcactatgc gggacataat caagtcagcg aataagaaat tgccgtttgg tggtaaagtc
      541 gtggtgttcg gtggagattt caggcagatc cttccagtta tacataaagg aaacagagca
      601 gaaatagtaa atgcttcgct gcattcatct gacttgtggc atcattgtaa ggtacttaca
      661 ctaactaaaa atatgcgctt gaatggtggc gagaatggat tgggaaaaaa agatattagt
      721 gactttgcag attggatttt gaaaattggt gaaggaagga ttaatctttc aaatgatgga
      781 gaagctgaca ttatttttcc cgatgagata ttaattccat cacatgataa tcatatacag
      841 aacattgtgg attctattta tcctagcctt cacagcgatc ttggtgatcc ccattttttt
      901 caaaacaaag ccatacttgc tccaacaaat gaggaagttg attctattaa tgatgatgtg
      961 ttggcctcca ttgatgaaga agaaagagtc tactacagtt tagacagcct aagtccagac
     1021 gaagttgatg atttatttgt acaatcattg tattcaccag aaattttaaa tggtttgaaa
     1081 gtaccaggtg ttcccaatca caggcttgtt ttgaagaagg gagtgcctat aatgttgcta
     1141 cgtaacgttg accagtcaaa gggcttgtgt aatggtacaa ggttaatagt tgaaaggctt
     1201 gcagataata atattgaagc aagaataata actggtcact gttttggcta a
//
LOCUS       XM_071831367             741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides replication protein A 70 kDa
            DNA-binding subunit A-like (LOC139841135), mRNA.
ACCESSION   XM_071831367
VERSION     XM_071831367.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..741
                     /gene="LOC139841135"
                     /note="replication protein A 70 kDa DNA-binding subunit
                     A-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 20 Proteins"
                     /db_xref="GeneID:139841135"
     CDS             1..741
                     /gene="LOC139841135"
                     /codon_start=1
                     /product="replication protein A 70 kDa DNA-binding subunit
                     A-like"
                     /protein_id="XP_071687468.1"
                     /db_xref="GeneID:139841135"
                     /translation="MAAVVEPTPLNLLTIDVNGAVVRVKVFVTWKKTYFNNPNSAMSL
                     EMILVDAQDNKIRASVRKRWISFYEPTFVEGKYLELSNFGVVDCDDKVKLIPNALKIS
                     IFRSTTITVCPLFDIATEGFSPVHFQELLEWRFSKDAVFDVLGALVEMKPMRIKHENG
                     VDNKSLEFTLKDNSGIAIRCALWAHHATRVFEYVSARKNDIDSIVLLMHNCKLREWQG
                     VPQVSNQLWGCRVYINDDIPAINRFKAE"
     misc_feature    64..327
                     /gene="LOC139841135"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(76..84,133..144,148..150,169..177,181..183,226..228,
                     250..258,298..306)
                     /gene="LOC139841135"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
     misc_feature    order(229..231,235..237,241..243,322..324)
                     /gene="LOC139841135"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239926"
     misc_feature    424..732
                     /gene="LOC139841135"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(424..426,607..609,613..615,619..621,685..687)
                     /gene="LOC139841135"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(439..447,499..510,514..516,535..543,547..549,
                     604..606,634..642,661..669)
                     /gene="LOC139841135"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
ORIGIN      
        1 atggctgcag ttgttgaacc tactcctttg aacttattga caattgatgt taatggtgct
       61 gttgttaggg ttaaggtttt tgtcacatgg aaaaaaacct atttcaataa ccccaactca
      121 gcaatgtcat tggagatgat tctagtcgat gctcaggaca ataaaattcg agcttctgta
      181 cggaagaggt ggatttcgtt ttatgagccg actttcgttg agggcaagta tctggaattg
      241 tccaactttg gggttgttga ctgtgatgat aaggtgaagt taatacctaa tgcacttaag
      301 ataagcatct ttagatcgac tactattact gtgtgtcctt tgttcgacat tgcaaccgag
      361 ggcttcagcc cggttcattt tcaagagctg ttggagtgga gattttcaaa agatgcagtt
      421 tttgatgttc ttggtgcatt ggttgaaatg aaaccaatgc gtatcaaaca tgagaatgga
      481 gttgataaca agtctttgga gtttactctg aaagataaca gtggtattgc aattaggtgt
      541 gccttatggg ctcaccatgc aactagagtt tttgagtacg tgtctgctag aaagaatgat
      601 atagactcca ttgttctact tatgcacaat tgtaaattaa gagagtggca aggtgttcca
      661 caagtgagta accagctctg gggttgtcgt gtgtatatta acgatgatat acctgctatc
      721 aaccgcttta aggctgagta a
//
LOCUS       XM_071831369            1140 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like
            serine/threonine-protein kinase At1g78530 (LOC139841136), mRNA.
ACCESSION   XM_071831369
VERSION     XM_071831369.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1140
                     /gene="LOC139841136"
                     /note="receptor-like serine/threonine-protein kinase
                     At1g78530; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 25 Proteins"
                     /db_xref="GeneID:139841136"
     CDS             1..1140
                     /gene="LOC139841136"
                     /codon_start=1
                     /product="receptor-like serine/threonine-protein kinase
                     At1g78530"
                     /protein_id="XP_071687470.1"
                     /db_xref="GeneID:139841136"
                     /translation="MGEMEKDLRVNLEHSVSQLSHLKTRLADITLATDNFSDEYSIFE
                     TMYYDIYRAEMELWDKENFDSIKEKNRSDERSERRTTVFIKRLRPREDEHGEKVFFTD
                     IIMLATCKHHNIVTLHGFCDEGQEKILIVEDASNEYLVSYLDNKKDKSNLTWEKRLRI
                     CLDIAYGLKYLHYEMEDHKTVINRDISTFSITLDHNFRAKIADFGRSVFLPPNLDTLQ
                     FLYVRKTFPLYIDPEFNKSAKLRRESDVYSFGVVLFEILSGRLANDEMYMTDNKDGLA
                     YVAHRSFLKGTITEKVDPIIMESGDKNFLTTKGPNKDSIDTFTKIAFWCLAKTQEPRP
                     TVKVVVEELEKALTFQEQVKCQDSDQVVESIELKLTDDDPLKVCG"
     misc_feature    130..1035
                     /gene="LOC139841136"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(130..135,142..144,148..150,247..249,253..255,
                     343..345,391..402,553..555,565..570,574..576,604..609)
                     /gene="LOC139841136"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgggcgaaa tggagaagga tttaagagta aacttggaac actcggtgtc tcaactcagt
       61 cacttaaaga ccagacttgc tgatataact ctagctaccg ataacttttc tgacgagtac
      121 agcatctttg aaaccatgta ctatgacata tatagagcag aaatggaact ttgggataaa
      181 gaaaattttg actctataaa agagaagaac agaagtgatg aacgttccga gagacgcacc
      241 actgtattta taaaacgctt gcgccctaga gaagacgaac atggagaaaa agtattcttt
      301 acagatatta taatgcttgc aacttgtaag catcacaaca tagtcacttt acatggattt
      361 tgtgatgaag gtcaggagaa gatccttatt gttgaggatg cttctaacga ataccttgtt
      421 agttatttgg ataacaaaaa agataaatct aatctaactt gggaaaaacg gttgagaata
      481 tgtcttgata ttgcatatgg attgaagtac ttacattatg agatggaaga ccataagacg
      541 gtgataaacc gtgatatctc tacattctca attacgttag atcataattt tcgagctaag
      601 atcgctgact ttgggagatc ggtcttcctt cctccgaacc tagacactct tcaattcttg
      661 tatgttcgta aaacgtttcc actatacatt gatccggaat ttaataaaag tgccaagtta
      721 agaagagaat cagacgtata ttctttcgga gtagttttgt ttgaaatttt aagtggaagg
      781 ttagccaacg atgaaatgta catgacggat aataaagacg ggctggcata tgtggcacac
      841 cgaagcttcc ttaagggaac aataacggaa aaagtagacc ctataattat ggaaagtggt
      901 gataaaaact ttcttacaac taaaggaccc aacaaagatt ctatagacac gtttacaaaa
      961 attgcatttt ggtgtttggc taaaactcaa gaaccacgtc caacagtgaa agtcgtcgta
     1021 gaagagcttg agaaagctct cacgtttcaa gagcaagtca aatgccaaga ttctgaccaa
     1081 gttgtcgaat ctatagaact gaaattgaca gatgatgatc ctttgaaagt ctgtgggtga
//
LOCUS       XM_071831370            1434 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841138), mRNA.
ACCESSION   XM_071831370
VERSION     XM_071831370.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1434
                     /gene="LOC139841138"
                     /note="uncharacterized LOC139841138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841138"
     CDS             1..1434
                     /gene="LOC139841138"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687471.1"
                     /db_xref="GeneID:139841138"
                     /translation="MDNSRYGSWAELFKIHCTAFDVIDHIIPSKSSSSSTSETDSASP
                     PTNQNPALWSRLDAIVLQWIYGTISGELIQIVLTPGHTAQQTWERLKSLFHDNEHSRS
                     VQLQQHFSNIRLDNFTNVSSYCQELKNTADQLSNVGDKVKEDRLVLQLISGLNESYRA
                     IGTLLSFTKPLPSFYDARSMLILEEQRNKTMAAQSSANAGTALTASSAPNNMQLNTGN
                     NHNRNNNNNNNNNYRGRGNFRGSINRGRGSYGSGRGRSNSGRNNNQGNYSGPQQKNWA
                     HSGPFTYGSWVWQSPNWAASPPPCPYPATSQWPKPMNSPSQTGILGPRPDSAYVQSIC
                     STPTATNIEAAMHTMSLNPPDENWYLDTGGTSHMAGSQGNLTTYYPSYVNKRIIVGNG
                     HDIPISGYGHSSLNINPNRPLFLSNILHAPKLIKNLISVRKLSADNCVSVEFDPFGFT
                     VKEFSTGIHLMRCNSTDELYPLNPTKL"
     misc_feature    187..567
                     /gene="LOC139841138"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggataaca gtcgttacgg gtcttgggcc gaattgttta aaattcactg cactgctttt
       61 gatgtcatcg atcatattat cccctctaaa tcatcctctt cctccacatc cgaaactgat
      121 tctgcttctc ctccaactaa tcaaaatcca gctttatggt ctcgactaga tgccattgtc
      181 cttcaatgga tatatggcac gatctcgggt gaacttattc aaatagtttt aacccctggt
      241 cacactgctc aacaaacctg ggaaagatta aaaagccttt ttcatgacaa cgagcactca
      301 cgatccgtcc aactacaaca acatttttcc aacattcgac ttgacaattt taccaacgtc
      361 tcctcctatt gccaagaact caaaaacaca gctgatcaac tatcaaatgt aggagataaa
      421 gttaaggaag atcgactggt cttacaatta atctccggct taaacgaaag ttatcgtgca
      481 atcggtactc ttctgtcttt taccaaaccg ctaccttcat tttatgatgc tcgttctatg
      541 ctgattttag aagaacaacg taacaaaaca atggccgcac aatcgtcagc aaacgctggt
      601 accgcactta cagcatcatc cgcacccaat aatatgcaat tgaacactgg taataatcac
      661 aatcgcaaca acaacaacaa caacaacaac aactatagag gcaggggtaa ttttcgtggc
      721 tccatcaacc gagggcgtgg tagttatggc agtggcaggg gtcgatcgaa ttctggcaga
      781 aacaataacc agggcaacta ttccggccca caacaaaaga attgggctca ttctgggcct
      841 tttacttacg ggtcatgggt ttggcaatcc cccaattggg ctgcaagccc accaccatgt
      901 ccttacccag ccacctctca atggcccaag cctatgaatt ctccatctca gaccggtata
      961 ttgggtcctc ggcccgatag tgcttatgtg caatctattt gttctacacc aactgctacc
     1021 aacattgaag ccgctatgca cactatgagt ctaaatcccc ccgatgaaaa ttggtaccta
     1081 gacactggag ggacttcaca tatggcgggt tctcaaggta acctcacgac ttattatccc
     1141 tcatatgtta ataagcgtat tattgttggt aatggtcacg acattccaat tagtggttat
     1201 ggacactcat ccctaaatat caacccaaac cgacctctct ttttatccaa tatattacat
     1261 gctccaaaat taattaaaaa ccttatctct gtccgtaaac tttctgctga taattgtgta
     1321 tctgttgaat ttgacccgtt tggttttact gtgaaggaat tttcgacggg aatccaccta
     1381 atgcggtgta atagcactga cgagctatat cctcttaacc ctactaagct gtaa
//
LOCUS       XM_071831372            2325 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841139), mRNA.
ACCESSION   XM_071831372
VERSION     XM_071831372.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2325
                     /gene="LOC139841139"
                     /note="uncharacterized LOC139841139; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841139"
     CDS             1..2325
                     /gene="LOC139841139"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687473.1"
                     /db_xref="GeneID:139841139"
                     /translation="MAEHDSQTQLITELTSQLARILQTNNENQSQRHPDSLKISVTLN
                     NSNYSLWSRMIKVAIGGKSEALLNHLTEDPPETNNQKWNQEDLVVFSWIIQNIEPQIA
                     SNLTQFTTAKTLWNALITTYSSGKDKLQTFDLHVKANNIRQEGKSTEELWLKLQGIWG
                     EIEIRDPNPMEHPNDIVKYNNIRSEQKLFQFLNALDYKHDNIKRELLRIDPLPTVEGA
                     YAAIRKENAHQYIFNNKTDVLTQSGIATGLVAPASKSKDFDSHGLLSRNQRRSDYTSS
                     SRDKDNLECTKCGMKRHTREQCFKVIGYPDWWADRHRKGKTSMVTTATTKGKQEDNET
                     GTTTQGGFGLFTAEPPSSSSSSSSGEGNRGLGLGIKSLKIIPNKLNKVGGDKYVDEYD
                     GLGVSVTNSTPTTEFNSPNLFIDTNSPCNNIVGNKQIKPFFNKTKDFKIKNNVSSINI
                     VSNKTKSNEWIIDCGATDTMTFNKNDIIINTKPNKTKIKTANGGIIQVKGGGTVEISP
                     NLNLKNCLYVPDLSHKLLSISHVTKELNCTVLLHPTFCILQDIRTGEIIGRGTERDGL
                     YYVDEVTKDGRIMLAHGTPDRQAWLWHRRLGHPSAGYLHILFPNLFSSNNSIECETCI
                     LAKSHQNSFKTSNTKTERPFALVHSDVWGPARVNGGHSFRYFLLFIDDCTRMTWTYFL
                     TNKSEVFDKFTTFSNMVQTQFQSKIQVLRSDNGGEFVNSQMKLFCEERGIIHQTTCPH
                     TPQQNRVAERKNRILLEITRALMIESNVPRSFWP"
     misc_feature    85..225
                     /gene="LOC139841139"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    1693..1884
                     /gene="LOC139841139"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1927..2226
                     /gene="LOC139841139"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atggcagaac atgacagcca aactcaactc attacagaat taactagcca attggctaga
       61 attctccaaa ccaacaatga aaatcaatca caaaggcatc ctgattcttt aaaaatcagt
      121 gttaccctta acaactcaaa ttattcatta tggtctcgta tgatcaaggt tgccatcgga
      181 ggtaaatccg aggccctcct caatcattta accgaagatc caccagaaac caacaaccag
      241 aagtggaacc aggaagactt ggtggtattt tcatggatta ttcaaaacat agagccacaa
      301 attgcaagca atctgaccca gtttacaaca gcaaaaacct tatggaatgc cctcatcaca
      361 acctacagtt ctggtaaaga caaactccaa acctttgatt tacatgttaa agccaacaat
      421 atcaggcaag aaggtaaatc aactgaagaa ctgtggttga aattacaagg aatctggggt
      481 gaaatcgaaa taagggatcc aaatcccatg gaacatccga atgatattgt caaatataat
      541 aatatcaggt cagaacaaaa gcttttccaa ttcttaaatg ctttagatta taaacatgac
      601 aatatcaaac gtgagctact aagaatcgat cccttaccca ctgtcgaagg ggcttatgct
      661 gccattcgaa aagaaaatgc acaccaatat atatttaaca ataaaacaga tgtccttacc
      721 caatccggca tcgccactgg cttggtagca ccggcatcaa aatccaagga tttcgacagc
      781 catggtttgc tatcaagaaa tcagcgtcgg tcagactaca cgtcatcatc ccgagataaa
      841 gacaaccttg aatgtacaaa gtgtggtatg aaacgacata ccagagaaca atgcttcaag
      901 gttattggat atcccgattg gtgggctgat agacacagaa agggaaaaac ctcgatggta
      961 acgacggcta caaccaaggg aaaacaggag gataacgaaa ccggcaccac cactcaaggt
     1021 ggtttcggtt tattcacagc cgagccacca tcatcatcat catcatcatc atccggtgaa
     1081 ggtaacaggg gattgggatt agggattaaa tccctaaaaa tcatacccaa caaattgaat
     1141 aaagtgggtg gggataaata tgtcgatgag tatgatgggt taggagtgtc ggtcacgaac
     1201 tcaacaccca ccaccgaatt taattcccca aatttattta ttgacacaaa tagtccctgt
     1261 aataatatag ttggtaataa acaaataaaa ccttttttca ataaaactaa agattttaaa
     1321 attaaaaata acgtttcgtc aattaacatt gtttcaaata aaacaaaaag taatgagtgg
     1381 attatcgatt gtggtgccac cgatactatg acttttaata aaaatgatat tattataaat
     1441 acgaaaccaa acaaaaccaa aattaaaacc gctaatggcg gtattataca agtcaagggc
     1501 gggggaacag ttgaaatctc accaaattta aatttaaaaa actgccttta tgttcccgat
     1561 ctctcccata aattactgtc tattagtcac gtgacaaaag aacttaattg taccgtctta
     1621 ttacacccta cattctgtat cttacaggac atcagaacgg gggagataat tgggcgtggt
     1681 actgaacggg atggtctgta ttatgtggat gaggtcacta aagatggtag gatcatgcta
     1741 gctcacggga ctcccgatag acaagcatgg ttgtggcata gacgtcttgg tcatccgtct
     1801 gctggatatt tgcacatttt atttcctaat ttattttctt caaataatag tattgagtgt
     1861 gaaacttgta ttttggccaa aagccatcaa aactcgttta aaactagtaa tacaaagact
     1921 gaacgtccct ttgctttagt tcactccgat gtatggggac ccgcaagggt taatggaggg
     1981 cacagttttc gatattttct tttatttatt gatgactgta ctcgtatgac ttggacatat
     2041 tttttaacta acaaatccga ggtgtttgat aaatttacta ctttttccaa catggttcaa
     2101 acacaattcc aaagtaaaat acaggtttta agatccgata atggtggtga atttgtcaac
     2161 agtcaaatga aacttttttg tgaagaaagg ggtattattc atcaaactac gtgtccacac
     2221 acacctcaac aaaacagggt agctgaaagg aaaaatcgta ttttattaga aataacccgt
     2281 gctttaatga ttgaatctaa tgttccaagg tctttttggc cttaa
//
LOCUS       XM_071831373            1242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841140), mRNA.
ACCESSION   XM_071831373
VERSION     XM_071831373.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1242
                     /gene="LOC139841140"
                     /note="uncharacterized LOC139841140; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841140"
     CDS             1..1242
                     /gene="LOC139841140"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687474.1"
                     /db_xref="GeneID:139841140"
                     /translation="MTIDKRWTTIRHSFNPDFIIGLNAFIERCKNYLDSHGKCSCPCK
                     HCGNTVFLKPKHIKDHIIKNGFEPSYTIWRHHGELPQPPEVHNTMDPLRNLLHDIQLE
                     EVPNFEEEGPNDDETMNDMTATGLEDLIDSTQTELYPGSKLSLLEFLAKLTHIKVLNE
                     WTITSFDQLLELLIQSHHLNNTIPKSFYETKKWMRKIGLGYQAIHACKNDYCLFYKEY
                     QDLENCPICNESRWKDERIMGKKVPNKVLRYFPITPRLKRLYSSRYTAKDMTWHATGQ
                     CNEEGKMRHPVDGRAWKEIDKRYLDFTREHRNVRLGLAADGFNPFGNMNNPYNMWPVI
                     LTTYNTPSWICMKESSLMSTLLISGPKSPGKDVDVYLRPLVDELKILWSEGVVTHDSV
                     TNTYFQMKSNAYLDHKRLSCP"
     misc_feature    13..234
                     /gene="LOC139841140"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    838..>1200
                     /gene="LOC139841140"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atgacgattg ataagaggtg gactactata cgacattcat ttaatcctga ctttatcatt
       61 ggtcttaatg catttattga gaggtgtaaa aactatttgg attcgcacgg taagtgtagt
      121 tgcccatgta aacattgtgg taatacggtt tttcttaaac ctaaacatat aaaagaccat
      181 ataattaaaa atgggtttga accctcttat actatttggc gacatcacgg tgaactacca
      241 caaccacccg aagtacacaa cacaatggac cctctaagaa atttattgca cgatattcag
      301 ttagaggaag ttcctaattt tgaggaggaa ggtccgaatg atgatgagac tatgaatgac
      361 atgactgcaa ctggtcttga ggatttaatt gactccaccc aaaccgagct atatcccggt
      421 agcaagttgt ccttattaga gtttttagcc aagttaacac acattaaggt cttgaacgaa
      481 tggacgatta cttcattcga ccaattgtta gaattactca tacaatcaca tcacctaaat
      541 aacacaattc cgaaatcatt ttacgaaact aagaagtgga tgagaaagat cggtttaggg
      601 tatcaagcga tacatgcttg taagaatgat tattgtttgt tttataaaga ataccaggat
      661 ttggaaaact gtccaatatg taacgagagt agatggaaag atgaacgcat aatggggaaa
      721 aaagttccta ataaagtttt gcgttatttt ccaataactc caagactaaa acgtttgtac
      781 agttccagat acactgcaaa ggatatgact tggcatgcta ctgggcagtg caacgaagag
      841 ggtaagatgc gtcatccggt agatggtcga gcttggaaag aaattgataa aagatatctg
      901 gattttacac gtgaacacag aaacgttcga ctagggttgg ctgctgatgg tttcaatcca
      961 ttcggcaaca tgaataatcc ttacaacatg tggccagtaa tattgacaac atacaacacg
     1021 ccgtcgtgga tatgtatgaa agaaagttct ctcatgtcga ctctattaat ttctggtcct
     1081 aaatcacctg gaaaagatgt tgatgtttac ttgaggcctt tagttgatga actgaagatt
     1141 ttatggtccg aaggggttgt tacacatgac tcagttacaa acacgtattt tcaaatgaaa
     1201 agcaatgctt atttggacca taaacgatta tcctgcccgt ag
//
LOCUS       XM_071831374             942 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139841141), mRNA.
ACCESSION   XM_071831374
VERSION     XM_071831374.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..942
                     /gene="LOC139841141"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins"
                     /db_xref="GeneID:139841141"
     CDS             1..942
                     /gene="LOC139841141"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071687475.1"
                     /db_xref="GeneID:139841141"
                     /translation="MASTITEFIHLLIPLEDVLEATNHFDDKNVIGHGGLGKVYKGKL
                     LRSGKWVNIAARRLDHKHKRGIEFWTEISALSSLKHENIVSIIGFCDEKGEKVIINKH
                     EAKRSLVMYLSNPILSWVQRLKICVGVACALSYIHYENGRSYLVIHRNINSSTILLDK
                     NFEPKLSGFEYSINHSVQRMDQVLFSEAIGTTGYMDPSIQKTGGVTHKSDVYSFGVVL
                     WEVLCGRKAFIPNGNDRFLAPLARFHYEDNTVNAIMLNCLVQSQLSLASVHTFTSLAY
                     SCLNDERVLRPDMNHIVYELEKALELQLPYEIYFVRY"
     misc_feature    91..894
                     /gene="LOC139841141"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(91..102,109..111,115..117,160..162,166..168,
                     250..252,298..309,448..450,460..465,469..471,499..504)
                     /gene="LOC139841141"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggcatcta caatcacaga gtttattcac ttactaatcc cacttgaaga cgttctagaa
       61 gccaccaatc actttgatga taaaaatgtc atcggccatg gtgggttggg caaggtttat
      121 aaaggtaagc tcttgcgatc tgggaaatgg gtaaatattg ctgcacggag attagaccat
      181 aagcataagc gaggcatcga gttctggaca gagatttctg cactttctag tctcaaacat
      241 gaaaacatag tctctattat cgggttttgc gatgaaaaag gggagaaggt gatcataaac
      301 aaacatgagg ccaagagaag tctcgtgatg tatctaagca atccaatcct ctcatgggtt
      361 caaagattga agatatgtgt tggtgttgcg tgtgccttaa gttacatcca ttatgagaat
      421 ggacggagtt acttagtaat acatcgtaac atcaacagct ctacaatact gttagataaa
      481 aattttgagc caaagttatc cgggttcgaa tattccataa accattcagt acaacgaatg
      541 gatcaggttc tcttctcgga agctattggc acaacagggt atatggaccc atcaattcaa
      601 aagactggag gtgtgaccca caaatcagac gtctactcat ttggtgttgt tttatgggaa
      661 gtattatgcg gtagaaaagc gtttatacca aatgggaatg ataggtttct agctccacta
      721 gctagatttc actacgaaga caatacagta aatgctataa tgctaaattg cctagtacag
      781 agtcaattat ccctagcatc agttcacacc ttcacatcat tagcatattc ttgcttaaat
      841 gatgagcgag tacttcgccc ggatatgaat catatcgtgt acgaacttga gaaagctttg
      901 gaacttcagc tgccatatga aatttatttt gtgagatact aa
//
LOCUS       XM_071831375             966 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            ANXUR2 (LOC139841142), mRNA.
ACCESSION   XM_071831375
VERSION     XM_071831375.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139841142"
                     /note="receptor-like protein kinase ANXUR2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139841142"
     CDS             1..966
                     /gene="LOC139841142"
                     /codon_start=1
                     /product="receptor-like protein kinase ANXUR2"
                     /protein_id="XP_071687476.1"
                     /db_xref="GeneID:139841142"
                     /translation="MLATDNFSATYHIGGTTYYELYKAELGLDKENVASLEEKNNSEL
                     SKTRTTAVIKRVFPREARRGDVFTTELEMLTICKHRNIVTLLGVCDEGSEMILVVEHA
                     SNGYLDEYLFNIKYRPILSWAKRLKICLDVGHALNYLHYEMENQKTIINCDIRSGTIA
                     LDENWGAKIVDFGFSIFLPPNLDALHLNCILGHECSIDPEYEDTGKLKRESDVYSFGV
                     VLFEILCGRVANDDEFTRESDKGLAFVIRRCFHEGTLKEMIDPIIKNECTNKDSLDVF
                     IKIAYQCLAKTQDQRPTMKVVIKELEKALTLQVSQDTFCLYSFST"
     misc_feature    37..909
                     /gene="LOC139841142"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(37..48,55..57,61..63,154..156,160..162,247..249,
                     295..306,457..459,469..474,478..480,508..513)
                     /gene="LOC139841142"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgttggcca cggataactt ttctgcaaca taccacattg ggggtactac atactacgag
       61 ttgtacaaag cagaacttgg tttggacaaa gaaaatgttg cctcactaga agaaaagaat
      121 aatagtgaac tatccaagac acgtaccact gcagttataa aacgtgtctt ccctagagaa
      181 gccagacgag gagacgtatt cactacagaa ctggaaatgc ttactatttg taagcatcgc
      241 aacatagtca ccctacttgg agtttgtgac gaaggttctg agatgatcct cgttgttgag
      301 catgcttcga atgggtacct tgatgagtat ttgtttaata tcaaatatag gcctattctt
      361 tcttgggcaa aacgtttgaa aatatgcctt gatgttggac atgctttaaa ttatctacat
      421 tatgagatgg aaaatcaaaa gacgattata aactgcgata taaggagcgg cacaattgct
      481 ttggatgaga attggggtgc aaagattgtt gactttggtt tctctatatt ccttcctcca
      541 aatctagatg ctcttcatct caattgtatc cttggccatg aatgttctat agatccagaa
      601 tatgaggata caggcaagtt aaaacgagaa tcggatgtat atagttttgg agtagttttg
      661 tttgaaattt tatgtgggag ggtagccaat gacgatgaat ttaccaggga gagtgacaaa
      721 ggactggcat ttgttataag gcgatgcttc catgagggaa cactaaagga aatgatagat
      781 cctataatta agaatgagtg taccaacaaa gattctctag acgtattcat aaaaattgca
      841 tatcagtgtc tcgcaaaaac tcaagaccaa cgtccaacaa tgaaagtcgt cattaaagag
      901 cttgagaaag cattaacgtt gcaagtaagt caagatactt tttgtcttta ttcatttagt
      961 acataa
//
LOCUS       XM_071831376            2118 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841143), mRNA.
ACCESSION   XM_071831376
VERSION     XM_071831376.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2118
                     /gene="LOC139841143"
                     /note="uncharacterized LOC139841143; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841143"
     CDS             1..2118
                     /gene="LOC139841143"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687477.1"
                     /db_xref="GeneID:139841143"
                     /translation="MRCLGDNLGHYMEDQVQSQELDEVVEEFWKSVEPTNENLMLKES
                     AVVRYSWDNSKDHPYAYLTIRRSDIILATDYFSKAHHIGKHGSYDLYKARLEVFDLDK
                     FSSEEEKNKGEVAKRLTTVCLKCIHDRDEDAEKLFRHSFLMHVSCKHRNIGNLLGLCD
                     EGSEMILVLEYPSNGYLYDYLKNIEDRLILTWAQRLRICFDIAYGVKYLHYEIGEQKA
                     IIHGDLRSKCIGLDENWGAKILDNGFAIYRPNEDGDGVHYNSPFSPTSYRDPEFSRTG
                     TLKRESDVYSLGVIMFEILCGRIADDRIYKKGSDTGLAFVARRCFDEGRIHEIVDPVV
                     KNGSGENKFSLNRGPNKRSLDAFLEVSYKCLEEIQDQRPTIVYVVEELEKALYFQENN
                     DDGDLRITLDDIKLATENFNVSNCVGGGGFGNVYKGKLPQCDDTIVAKKLDTRGGQGE
                     QQFRIELQILFEYKHKNIIGLVGYCDQEDAKVIVYEYAPRGSLDRYLSDARLNWIKRL
                     QICIDVATALDFLHRGIGKPGTVIHRDIKTANILLTGEWKAKLADFGLSLISTIHKET
                     DYVINRACGTPGYVDPLYLKSGFLTKESDIYSFGVVLFEMLCGRSTFETHKREGMYLP
                     SFIKHSFENEKRDEVVFEKIKAQIMPKALTAFRKIAYRCLRDDREKRPQAKEVVKQLK
                     KAMRFQQDNFIDKEMIQRELQYE"
     misc_feature    244..1152
                     /gene="LOC139841143"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(244..255,262..264,268..270,364..366,370..372,
                     457..459,505..516,667..669,679..684,688..690,718..723)
                     /gene="LOC139841143"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1249..2049
                     /gene="LOC139841143"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1249..1260,1267..1269,1273..1275,1315..1317,
                     1318..1320,1405..1407,1453..1464,1603..1605,1615..1620,
                     1624..1626,1654..1659)
                     /gene="LOC139841143"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgcgttgtt tgggtgacaa ccttggacat tatatggagg atcaagtaca atcccaagag
       61 ctcgatgaag ttgtcgaaga attttggaaa tcggtagaac caacaaatga aaatcttatg
      121 ttaaaggaaa gtgcagttgt acgttattct tgggataata gtaaggatca tccctatgca
      181 tacctcacta ttcgacggag tgatataatt ttggccaccg attacttttc taaggcacat
      241 catattggga agcatggaag ctatgacttg tataaagcta gacttgaggt ttttgatcta
      301 gataaatttt cctcagaaga agagaagaat aaaggtgaag tagcaaaaag actcactact
      361 gtgtgtttga aatgcatcca tgatagagat gaggatgcag aaaaactatt tcgtcacagt
      421 tttctcatgc atgtaagttg taaacatcga aatataggga atttacttgg attgtgtgat
      481 gaaggttccg aaatgatcct cgttttggag tatccttcta acggctatct ttatgattat
      541 ttgaaaaaca tcgaagatag gcttattctt acttgggcac aacgtttgag aatatgtttt
      601 gatattgcat atggagtaaa gtacctacac tatgaaatcg gagaacaaaa ggctataata
      661 cacggtgatt taaggagtaa atgcattggg ttggatgaga attggggagc aaagattctt
      721 gacaatggtt tcgcgatata ccgtccgaat gaagatggtg acggtgtaca ttataatagt
      781 ccttttagcc ctactagtta cagggatcca gaatttagta ggacgggtac gttgaaaaga
      841 gaatcagatg tatacagttt aggagtaatt atgtttgaaa ttctgtgtgg gaggatagcc
      901 gatgatcgca tatacaaaaa ggggagtgac actgggctgg catttgtggc aagaagatgc
      961 tttgatgaag gaagaataca tgaaatcgtt gatcctgtcg ttaagaatgg aagcggtgag
     1021 aacaaatttt ctctaaatag aggacccaac aaaaggtctc tcgatgcttt tttggaagtt
     1081 tcatacaagt gtttggaaga aattcaagat caacgtccaa caatagtata tgttgtagag
     1141 gagctcgaga aagccttata ttttcaagaa aacaacgatg acggcgacct caggattaca
     1201 cttgatgata taaagttggc cactgaaaac ttcaatgtta gcaattgtgt tggtggagga
     1261 ggatttggaa atgtttataa aggaaaactt ccacaatgtg atgatacaat tgttgcaaag
     1321 aaattggata caagaggtgg tcaaggggaa caacaatttc gcattgagct ccaaattctt
     1381 tttgagtata agcacaaaaa tatcatcggt cttgtaggct attgtgatca agaagatgca
     1441 aaagtcattg tttatgagta tgcgcctaga ggaagtcttg ataggtattt gagcgatgct
     1501 cgtcttaatt ggataaaaag acttcaaata tgtattgatg ttgcaaccgc attggatttt
     1561 cttcatagag gtatcggaaa accaggaacg gtgatacata gggacatcaa aaccgctaat
     1621 atcttgctaa ccggtgagtg gaaggcaaaa ctcgctgatt ttgggctttc cttgataagt
     1681 acaatacata aggaaactga ctacgttatc aatcgtgcgt gtggcacacc gggctacgtg
     1741 gatccacttt acttaaaatc aggcttctta accaaagaat ccgatatata ttcatttggt
     1801 gttgttttat ttgagatgtt gtgtggaaga tcaacgtttg agacccacaa acgggaaggt
     1861 atgtatctac caagcttcat caaacatagc tttgaaaatg aaaaacgtga cgaggtggta
     1921 tttgagaaaa taaaagcaca gatcatgccg aaagcattga ctgcattccg aaaaattgcg
     1981 tatcggtgct tacgtgatga tagagaaaaa cgaccccaag caaaagaagt tgtaaaacaa
     2041 cttaagaagg caatgagatt tcaacaagat aattttattg ataaggaaat gatacaaaga
     2101 gaattacaat atgagtaa
//
LOCUS       XM_071831377             528 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841144), mRNA.
ACCESSION   XM_071831377
VERSION     XM_071831377.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..528
                     /gene="LOC139841144"
                     /note="uncharacterized LOC139841144; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841144"
     CDS             1..528
                     /gene="LOC139841144"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687478.1"
                     /db_xref="GeneID:139841144"
                     /translation="MTSNAIQSVNNMTIRSILEKEKLNGNKFIDWYRNLQIVLKSERK
                     LHHLENPLPEAPPETANATVRNAYTKQYNEQLEVACLMLASMTSELQRNLIDYNEYDM
                     IEELKTMFQQQAEQELFETVKAFHACKHELGQPVSQYVLKMKDYLDQLERLAWEKLFL
                     GYMQCLSKLKRGYQR"
ORIGIN      
        1 atgacatcaa acgcaattca atccgtaaac aacatgacca taaggtcaat ccttgagaag
       61 gaaaaattga atggtaacaa attcattgac tggtatcgaa accttcagat tgtcttaaag
      121 tctgaaagga agttgcacca tctggaaaat cctttacctg aagccccacc tgaaactgct
      181 aatgctactg ttcgtaatgc ttatactaag cagtataacg aacaacttga agtggcatgt
      241 cttatgcttg ctagcatgac ctctgagctc caaaggaact taatagacta caatgaatat
      301 gacatgatcg aggaactcaa gacgatgttc caacaacagg cagaacaaga attgtttgaa
      361 actgtgaaag cgtttcacgc ttgcaaacat gagttggggc agccagttag ccaatatgtc
      421 ttgaagatga aagactatct ggatcaattg gagcgcctag catgggaaaa actattcctg
      481 ggctacatgc aatgcttaag caagctgaaa aggggctacc aaagatga
//
LOCUS       XM_071831378             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At5g59700 (LOC139841145), mRNA.
ACCESSION   XM_071831378
VERSION     XM_071831378.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139841145"
                     /note="probable receptor-like protein kinase At5g59700;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 31 Proteins"
                     /db_xref="GeneID:139841145"
     CDS             1..780
                     /gene="LOC139841145"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At5g59700"
                     /protein_id="XP_071687479.1"
                     /db_xref="GeneID:139841145"
                     /translation="MASTITEFSHLQMPLEDILEATNHFDDKNVIGHGGLGKVYKGKL
                     LRFGKLVNIAARRLDTKHKRGIEFWTEISAISNEKVIINKHEAKRSLVMYLSNPTLSW
                     VQRLKICVGVARALSYIHYENGRSYSVLFSEAIGTTGYMDLTIQKTGGVTYKSDIYSF
                     GVVLWEVLCGRKAFMPNCFNRLLVPLAKFHFEASTVNAIMLTWLLQNRLSLDSVQIFT
                     SVAYSCLKDERVLRPDMNNIVYELEKALEFQLPYEIYIVRY"
     misc_feature    91..732
                     /gene="LOC139841145"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atggcatcta caatcacgga gtttagtcac ttacaaatgc cacttgaaga cattctagaa
       61 gccaccaatc actttgatga taaaaatgtc atcggccatg gtgggttggg caaggtttat
      121 aaaggaaagc tcttacgatt cgggaaattg gtaaatattg ctgcaaggag attagacact
      181 aagcataagc gaggcatcga gttctggaca gagatatctg ctatttccaa tgagaaggtg
      241 atcattaaca aacatgaggc caagagaagt ctcgttatgt atctaagcaa tccaaccctc
      301 tcatgggttc aaagattgaa gatttgtgtt ggagttgcgc gtgcattaag ttacatccat
      361 tatgagaatg gacggagtta ctcggttctc ttctcagaag ctattggcac aacagggtat
      421 atggacctta caattcaaaa gactggaggt gttacctaca agtcagacat ctactcattt
      481 ggtgttgttt tatgggaagt attatgtggg agaaaagcgt ttatgcctaa ttgttttaat
      541 aggttgctag ttccactagc caaatttcac tttgaagcca gtacagtaaa tgccataatg
      601 ctaacttggt tactacagaa ccgattgtcc ctggactcag tccagatctt cacatcagta
      661 gcttattcct gcttaaaaga tgagagagta cttcgcccgg atatgaacaa tattgtctat
      721 gaacttgaaa aagcattaga atttcagctg ccatatgaaa tttatattgt gagatactga
//
LOCUS       XM_071831379            1263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841146), mRNA.
ACCESSION   XM_071831379
VERSION     XM_071831379.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1263
                     /gene="LOC139841146"
                     /note="uncharacterized LOC139841146; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841146"
     CDS             1..1263
                     /gene="LOC139841146"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687480.1"
                     /db_xref="GeneID:139841146"
                     /translation="MALEDLLISESESETDSDSAESDSDEDLIQECYNTLNLLDSLNA
                     MDEEDEARNSRTIIRRRRLHRDRIDTGNRLFRDYFSDNPTFPGDYFRNRFRMSKSLFM
                     RIGHAILTYNSQPRPDYFKFFDQRYNSTAQLGFNIFQKCTSVIRQLAYGIAPDAFDEY
                     LHMGASTSRDCLKNYCKCIIHMFSREYLRKPTEGEVRRLHAKHLEMHGFPGMLGSLDC
                     MHWSWKNCPVAWQGHYHRGDHEGPTIMLEVVASYDMWIWHAFFGPAGSNNDINVLNES
                     DLFEDLLDGRAPEVRYTINTHKFTKGYYLVDGIHPEWATLVKSFKCPLEPKNVKFKRF
                     QEAARKDVERAFGVLQGRWAILKHPARPFSINKIRRIMYTCVILHNMITEDNERNICD
                     LEEDYLRERENMPRRTWTERIALQDRVD"
     misc_feature    556..1170
                     /gene="LOC139841146"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
     misc_feature    1120..>1233
                     /gene="LOC139841146"
                     /note="Eukaryotic glutathione synthase; Region:
                     GSH_synthase; pfam03199"
                     /db_xref="CDD:460845"
ORIGIN      
        1 atggctttgg aagatttatt aatttctgag agcgaaagcg agacggatag tgatagcgca
       61 gagtccgatt ctgatgaaga tttaattcaa gaatgttaca acacgcttaa cttactcgat
      121 tcgcttaatg caatggacga agaagatgag gctagaaatt ctcgtacaat tattagaaga
      181 cgccggttac atagagatcg tattgatacg ggtaatcgtt tgtttcgcga ctatttctca
      241 gataatccaa catttcctgg tgattatttt cgaaatcgat ttcgaatgag taagtcattg
      301 tttatgcgta ttggtcatgc tattctaacg tataattctc aaccgagacc cgattatttt
      361 aaattttttg atcaacgata caattcaacc gctcaactcg gtttcaatat ttttcaaaag
      421 tgtacatcgg tcatacgtca attggcgtat ggcattgcgc ctgatgcatt cgatgagtat
      481 ttacacatgg gcgcatcaac gtctcgagat tgtttaaaaa attattgcaa atgtattatt
      541 catatgtttt cgcgagagta tttaaggaaa ccaactgaag gagaagttcg tcgattgcat
      601 gccaaacatt tggagatgca cgggtttccg ggtatgttag gtagtctcga ttgcatgcac
      661 tggtcttgga aaaattgtcc tgttgcgtgg caagggcatt accacagggg tgatcacgaa
      721 ggaccaacaa taatgctcga ggtggttgcg tcctacgata tgtggatttg gcacgctttc
      781 tttggtccag cgggttcgaa caatgatatt aatgttctta atgaatcgga tttgttcgaa
      841 gatttattag atggtcgagc tcctgaggtc cgttacacta tcaacacgca caaatttact
      901 aaagggtatt acttggtaga tggcatacac ccagaatggg caacacttgt caagtcgttt
      961 aaatgtccac ttgagccaaa aaatgtaaag tttaaacgtt ttcaagaagc cgcgagaaaa
     1021 gacgttgaac gagctttcgg tgttcttcaa ggtcgttggg caatactaaa acacccagca
     1081 agacctttta gtatcaataa aatacgtcga atcatgtaca cttgtgttat acttcacaac
     1141 atgatcaccg aagacaacga gcgcaacata tgcgacctcg aagaggatta tctccgcgaa
     1201 cgagaaaaca tgccgcgacg tacttggacg gagagaattg cgctccaaga tcgggtggat
     1261 tga
//
LOCUS       XM_071831380             393 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841148), mRNA.
ACCESSION   XM_071831380
VERSION     XM_071831380.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..393
                     /gene="LOC139841148"
                     /note="uncharacterized LOC139841148; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841148"
     CDS             1..393
                     /gene="LOC139841148"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687481.1"
                     /db_xref="GeneID:139841148"
                     /translation="MPPYEMLYGRKCRTPICWGEVGQKEVGGIEVVLQTNQKIEMICP
                     ASKRHTIDKNLAYWLDLPDELAGIHNTFHVSYLRKCLADDSMWVPLNEITLKNKLEYV
                     EESVAILDEEVKEIRNKRNRTYKVQWRH"
ORIGIN      
        1 atgccgccat acgaaatgct ctatggaagg aaatgtcgaa ccccgatatg ttggggtgag
       61 gtgggtcaaa aggaagttgg tggtatcgag gtggttcttc aaacgaacca aaagatagag
      121 atgatttgtc ccgcctcaaa gcggcacacg atcgacaaaa atcttgccta ttggttagat
      181 ttacccgatg aacttgcggg aatccataac acatttcatg tttcctatct tcgcaagtgc
      241 cttgcggatg actcgatgtg ggtaccatta aatgagatca ctctaaaaaa caaattagag
      301 tatgtggaag agtcggttgc gattcttgat gaagaggtta aagagattcg gaataagaga
      361 aatcggactt ataaggtgca atggcgtcac tga
//
LOCUS       XM_071831381             435 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841149), mRNA.
ACCESSION   XM_071831381
VERSION     XM_071831381.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..435
                     /gene="LOC139841149"
                     /note="uncharacterized LOC139841149; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841149"
     CDS             1..435
                     /gene="LOC139841149"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687482.1"
                     /db_xref="GeneID:139841149"
                     /translation="MASDLTTLQPINHILHSVPIKLELETSQYNSWSELFRTYCKAHD
                     VLAHLTSETIPVSSSSKAVEITQETWDRHDAIVLQWIYATLLTELLKTILEKDLTAKK
                     AWDRLKILFHDNQHSRALALMNQFTNCKLDNYPNISAYCHMN"
ORIGIN      
        1 atggcatccg atttaaccac acttcagccc atcaatcaca ttcttcactc tgtccctatc
       61 aaattagaac tagaaacaag tcaatacaat tcatggagcg aattatttcg cacctactgt
      121 aaagcacacg atgttcttgc tcacctcacc tctgaaacca ttcccgtgtc ttcttcctcc
      181 aaagcagtcg agatcacaca agaaacatgg gatcgtcacg atgccattgt tcttcaatgg
      241 atttatgcca ctctcttaac cgaattactc aaaacaattc tagaaaaaga tctcactgca
      301 aagaaagcct gggatcgact aaaaatcttg ttccatgata accaacactc acgagcctta
      361 gccttaatga accaatttac caattgcaaa cttgataatt atcctaatat ctccgcctat
      421 tgccacatga attga
//
LOCUS       XM_071831382            1323 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841150), mRNA.
ACCESSION   XM_071831382
VERSION     XM_071831382.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1323
                     /gene="LOC139841150"
                     /note="uncharacterized LOC139841150; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841150"
     CDS             1..1323
                     /gene="LOC139841150"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687483.1"
                     /db_xref="GeneID:139841150"
                     /translation="MACNFTMIQRITLRNSFVNIRFKLLSFEVMSKKKFDSGLPFLDL
                     IVCDEEGSRIGITIKNVLMSRYEPLLKVQNNYLLRNASVISNLFKGKSKHWEHPCKLM
                     LTQRSTVVNVPANEWRVSSGFKFIPFNDLITCKLEEGVTAEQLTVRSDWTFTRILINH
                     DCEEGNDFIKSILETHANSETTESLAPSSEPAEDPVEAWFKYTTSVDYFDLPFCEPGM
                     YVVHAKIISVLSDDPWWYIGCKKHHKKANPEVTDVDLTLDVDSKYKVSVCIEDLTDTT
                     TVTLFKTQVCKYVTKSAYQLQKSLLDSQDFPDDLDVLIGNKLVFKLDVSNYNLTSVNP
                     NYTVKDVMSEVAYVEKFKTKLEAHKALNEAGKKISHDAKGTPSGCSSWPKCDSTQTSG
                     PVEVGTSTGYTPTKKIIKQEPSGSPVSVKSTTTKAKRNLNPNVVPLKI"
     misc_feature    58..330
                     /gene="LOC139841150"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(70..78,127..138,142..144,163..171,175..177,220..222,
                     244..252,298..306)
                     /gene="LOC139841150"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(223..225,229..231,235..237,325..327)
                     /gene="LOC139841150"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    646..1068
                     /gene="LOC139841150"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(658..660,949..951,955..957,961..963,1027..1029)
                     /gene="LOC139841150"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(673..681,796..807,811..813,829..837,841..843,
                     946..948,967..975,1003..1011)
                     /gene="LOC139841150"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggcatgca atttcactat gattcaaaga atcacactaa gaaactcatt tgtcaacatt
       61 cgatttaagc ttttgagttt tgaagttatg tccaagaaaa agtttgattc tggcttgccc
      121 tttcttgatt tgatcgtatg tgatgaagag ggctcaagaa ttggcattac gattaaaaat
      181 gttttgatgt caagatatga acctcttttg aaagtgcaaa acaattattt gctgaggaat
      241 gcatctgtaa taagtaatct gttcaaagga aagtcaaagc attgggaaca tccctgcaaa
      301 ttgatgctaa cccagaggtc aactgtggtt aatgttcctg ctaatgaatg gcgtgtcagt
      361 tctggtttca aattcatacc cttcaatgat cttattactt gcaaacttga agaaggtgta
      421 actgcagaac aactaactgt gcgttcagat tggacattca caagaattct gattaaccac
      481 gactgtgaag aaggcaatga ctttataaag agcattttgg agactcatgc aaactctgaa
      541 acaaccgagt ctttggcacc atcctctgaa ccagctgagg atccagttga agcttggttt
      601 aagtacacta catctgtaga ctattttgac ttaccatttt gtgagcctgg tatgtatgtc
      661 gtgcacgcaa aaatcatttc tgtgctttca gatgatccat ggtggtacat tggttgcaag
      721 aaacatcaca agaaggccaa ccctgaagtt actgacgtcg acttaacgct ggatgtcgat
      781 tcaaagtaca aagtgagtgt atgtattgaa gacttgaccg acacaaccac cgttactttg
      841 tttaagactc aagtttgtaa atatgttact aagtcagcat atcagctaca gaaatcttta
      901 ctggatagcc aggattttcc agatgatttg gatgttctta ttggtaacaa gctcgtgttc
      961 aagttggatg tgtccaacta caacctaact agcgtaaatc caaactatac tgtgaaggat
     1021 gtaatgtcag aagttgcgta tgtggaaaaa tttaagacta aacttgaagc tcataaggct
     1081 ttgaatgaag cagggaagaa aattagtcat gatgcaaaag gtactccatc tggatgctca
     1141 agttggccaa agtgtgattc tactcagaca tctggtccag ttgaggttgg aacaagtaca
     1201 ggctacacac caaccaagaa gattattaaa caagaaccaa gtggaagccc tgtttctgtg
     1261 aagtctacaa caaccaaggc aaagaggaat ctcaatccta atgtggttcc cttgaagatt
     1321 tag
//
LOCUS       XM_071831383            1755 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841151), mRNA.
ACCESSION   XM_071831383
VERSION     XM_071831383.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1755
                     /gene="LOC139841151"
                     /note="uncharacterized LOC139841151; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139841151"
     CDS             1..1755
                     /gene="LOC139841151"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687484.1"
                     /db_xref="GeneID:139841151"
                     /translation="MYRRATDFFEQNNEPNFKIKLIARRSGDGRNYNFPTVDEVAALI
                     VGDIDLNFDKRDIIVDSLKEGLQHISELHPQYLALQYPLLFAHAEDGYRLDIYHRDVD
                     ENTRRLKKHVTMREFLLISYKKENLQLLSIYHASYINNCWLMLTPWSNLKECITSGKN
                     KTYLEPTLLQTLLKRLSPSYGYPDLFITFTCNSKWPEIRRALEGTGFNPEDKPAYQAR
                     MFKIKFDRLMEAIKNSLFGRVKADLYTIEFQKRGLPHAHICIFLDERDKLPKLEDVDK
                     FISAEIPDKDADLELYQLVSDLMIHDCTTVDKEDYPIFKCRDNDGKVRKYLFKYINKD
                     NDRVTAGVCDEVTDEIKEYYDCRYVSSCEPVWRMLSFDIHNRNPIVIRLAFHLPDQHS
                     VIFDEDDLIENLLDSESVNRSQFLEWMNMNRANEDARHLSYLYFPTKFVWNKETKLWS
                     PRKVFTDTIGRIHHVSLQTGELFYLGILLNKVKGLTSYEDIQTVNGQLCPTFKDACYE
                     MGLLDDDQEYINGIKEADSWGGGHFVWNLFCQLLKSESLSRPKVVFDEAFEYLSIDII
                     HHRLSDIQPTHEMLKNLT"
     misc_feature    <538..774
                     /gene="LOC139841151"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgtatagaa gggcaacaga tttttttgaa caaaataatg aacctaactt taaaatcaag
       61 ctaatagctc gcagaagcgg tgacggacgt aactacaact ttccaacagt tgatgaagtt
      121 gctgcactaa tagttggaga tattgattta aactttgata agagggacat aattgtagat
      181 agtcttaaag aaggactaca acatattagc gaattacatc cccaatattt agctcttcaa
      241 tatcctcttt tgttcgcaca tgctgaagat ggatatcgtc ttgatattta ccaccgtgat
      301 gttgatgaaa acacaagaag gttaaagaaa catgttacaa tgcgtgaatt tttgcttata
      361 agttataaga aagaaaatct ccaactcttg tccatctatc acgcaagtta catcaacaat
      421 tgttggttga tgcttacacc atggtcgaat ctgaaagaat gtattacatc cggaaaaaac
      481 aaaacatact tagagccgac acttttgcaa accttactga agcgactctc accgagttat
      541 ggttatcctg atctcttcat tacttttaca tgtaattcta agtggccaga gattaggaga
      601 gccttagaag gtactggatt taatcctgaa gataaaccag catatcaagc aaggatgttt
      661 aagatcaaat ttgatcgact aatggaagct ataaaaaata gtctgtttgg aagggttaaa
      721 gctgaccttt acaccataga gttccaaaaa agaggtttgc ctcatgcaca tatctgtatt
      781 ttccttgatg aaagagacaa actacctaag ctagaagatg tcgataagtt catttctgca
      841 gaaatacctg acaaggatgc tgacctagaa ctttaccaac ttgtgtcgga tttaatgatt
      901 cacgactgta caactgttga taaagaagat tatccaattt tcaaatgtag agacaacgac
      961 gggaaggtta gaaaatatct atttaaatac atcaataaag acaatgatag ggtcactgct
     1021 ggtgtttgcg atgaagtgac tgatgaaatc aaagaatact atgactgcag atatgtatca
     1081 tcatgcgaac cagtatggcg tatgttatct tttgatatac acaatagaaa tccaatagtt
     1141 atacgccttg cctttcactt accagatcaa cattcagtta tctttgatga agacgattta
     1201 atagaaaacc ttttagactc tgaatctgta aatagatctc aattccttga atggatgaac
     1261 atgaatcgag ccaacgaaga tgcaagacat ctatcgtatc tttactttcc aacaaaattt
     1321 gtgtggaata aggaaacaaa actttggtct ccaagaaaag ttttcaccga cacaattggc
     1381 cgtatacatc acgtatctct tcaaaccggt gaactatttt atctaggtat tttgttgaat
     1441 aaagttaaag gcctcacttc atatgaagat attcagactg ttaatggtca actgtgtcct
     1501 acatttaaag atgcatgtta tgaaatgggt ttattagacg acgatcagga atacatcaat
     1561 ggtataaaag aggcagatag ttggggtggt ggtcactttg tttggaactt attctgtcag
     1621 ttacttaaat cagagagcct aagtagacca aaagttgttt ttgatgaagc ttttgaatac
     1681 ttatctattg acattattca ccatcgcctt tcagacatcc aacctaccca tgaaatgttg
     1741 aagaacctta catga
//
LOCUS       XM_071831384             633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent DNA helicase
            RRM3-like (LOC139841152), mRNA.
ACCESSION   XM_071831384
VERSION     XM_071831384.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..633
                     /gene="LOC139841152"
                     /note="ATP-dependent DNA helicase RRM3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841152"
     CDS             1..633
                     /gene="LOC139841152"
                     /codon_start=1
                     /product="ATP-dependent DNA helicase RRM3-like"
                     /protein_id="XP_071687485.1"
                     /db_xref="GeneID:139841152"
                     /translation="MNETEKLLHRNGKSLKNYPSMPYPSSTVLNLSDSPFIIDELSYN
                     MSELEIQHAELISRLNTDQKKAYDTIVSAVTADKGGAFFVYGSGGTGKTFLWNTLSAA
                     LRSRSQIMLNVASRGIFALLFPGRRTAHSHFGIPIDPKDESYFRIQPNSHLAELIRKT
                     KLIIWDEAPMVNGLCVETLDRSLQDIFWPINSNSMDTPFGGKVIVFGGDL"
     misc_feature    175..>627
                     /gene="LOC139841152"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(262..282,496..498)
                     /gene="LOC139841152"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgaatgaaa ctgaaaaact acttcaccgc aatggtaaat ctttaaagaa ttatccttca
       61 atgccttatc cgtcttcaac agtgcttaat ttgtcagata gtccatttat tatagatgaa
      121 ttgtcatata atatgtctga actagaaata caacatgctg aattaatcag tagactaaac
      181 actgatcaaa aaaaggcata cgatactatc gtaagtgctg ttacagcaga taaaggcgga
      241 gcattttttg tatatggttc gggtggtaca ggaaaaactt ttttatggaa tacattgtca
      301 gctgcattga gaagtagaag tcaaattatg ttgaatgttg cttccagagg aattttcgct
      361 ttgttatttc ctggtagaag aactgctcat tcgcatttcg gaattcctat agatccaaag
      421 gacgaatcat actttaggat tcagcctaat agtcatttgg cagaattgat tagaaaaact
      481 aaactgatta tctgggatga agctccaatg gttaacgggc tatgcgttga aacactagat
      541 cggtcgttac aagatatttt ttggccaatt aatagtaaca gcatggatac tccatttgga
      601 ggtaaagtta tagtgtttgg tggtgattta tga
//
LOCUS       XM_071831385             369 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841153), mRNA.
ACCESSION   XM_071831385
VERSION     XM_071831385.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..369
                     /gene="LOC139841153"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841153"
     CDS             1..369
                     /gene="LOC139841153"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687486.1"
                     /db_xref="GeneID:139841153"
                     /translation="MVGSLMYLTVSRPDITLVVMVCARFQSNPKKSHSKAVVRIFHYL
                     KGTPNLGVWYPQGSDFYLTAYTDADDGGFHVDRKSTSGSIQMLGNRLVSWSSKKQNCV
                     SLSTADSEYITVAHGCSQVL"
     misc_feature    187..>366
                     /gene="LOC139841153"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggttggtt ctttaatgta cttaactgtg agcaggccgg acattacact tgttgtaatg
       61 gtctgtgctc gcttccagtc aaaccctaag aaatcacact ccaaagcagt ggttagaatt
      121 tttcattacc ttaaaggtac acctaacctt ggagtctggt atcctcaagg atctgatttc
      181 tatctcactg cttacacaga tgctgatgat ggcggtttcc atgttgatag gaaaagcaca
      241 tctggatcaa ttcagatgtt gggaaataga ctagtcagtt ggtcatccaa aaagcagaac
      301 tgtgtgtcct tatcaacagc tgactctgag tatattactg tagctcacgg ttgttcacaa
      361 gttttgtga
//
LOCUS       XM_071831386            4858 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ESSENTIAL FOR
            POTEXVIRUS ACCUMULATION 1-like (LOC139841155), mRNA.
ACCESSION   XM_071831386
VERSION     XM_071831386.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4858
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4858
                     /gene="LOC139841155"
                     /note="protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841155"
     CDS             70..4614
                     /gene="LOC139841155"
                     /codon_start=1
                     /product="protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION
                     1-like"
                     /protein_id="XP_071687487.1"
                     /db_xref="GeneID:139841155"
                     /translation="MANKTELLDSPHHDQISKDGQGSDSSIPLSPQWLLPKPEENKTR
                     TVSGEMHSSAFSAFANRHVPVKSQGNLDPVNDTQKKKDVFRPSVLDNRDRWRDEERET
                     NSSARKDRWGEGDKEPGDTRKVDRWTENSSGRYRAPSERLGDAGNKDHNNDQLRENKW
                     TTRWGRDNKEMDKMDSPRDKWVDSGKDDLDTGHPRPWRSSSALNRGKVEQPSYQSPVS
                     NKVSPMVGHGRGRGENHNPVFSIGRGRGAVEGNSLNNKFNEESSHVRYSREKLIDVYK
                     MTDTRNGERVVLVPSLTQEDPLEPLALISPNPEELFILKGIDQGDILSSGVITKDGSF
                     GRNTGDVQSNRTKLGSKEDLQLAEDSYKDGSADRFKEAEYGVSHARNNEWSGNSVNPA
                     ATWRPQLQKDTTNERSGNSVNPYSKGEGPVMIRQPSGYLDREQDTRIQTVSQPSPEDL
                     VLFYKDPQGLVQGPFTGVDIIGWFEAGYFGIDLLVRLANTPHDSPWSLLGDVMPHLRA
                     KVRPPPGFTAAKQSEVNDRSGQLGSTGLGNNNTIMKNEQVLQHGSITDAEKRFLESLM
                     SNNMGGGGSLEKLSLSEGTTQGYFGNSNSVLPLGTESSDNLYQLAQRVQLERQKSTSN
                     PYSFWSGRDTTSVGPTSNILQNPTVQQSNMSRPSNVPNPEFMSILQGLSERPTSAVNG
                     PVTTWSNLPVQAGLDPHQASLGSHQRPQPQNQYSPLIQDKFLVSGLSQEPQLLNLLQQ
                     QQQYMLQMNPQATIPTQQLSILDDYFLLKQQQQKQELQQQQLLRQQLLSQMHNEPHSQ
                     QHLVNQSYGQIQSLDHLGFQPASHEVFPMGSQNVLPNIQDPVTTNFLNIPPILPQAEN
                     LADKSEISVQLPHQMVENDDGVHKRDADDSCLKEQTLNVGLKTDENTTLVTSHDASIS
                     IPVVQIVSPSAVQKVESATSNEVKSIEPCEVNKPSEKKSKKQKSKLKSADMAKTTSKT
                     QQPNKLDTEVGKVNDHESEVQSVQQEKERVVTIHPDTVSDDVIQISEKKNEDTSSYTV
                     QRAWKPAPGFKPKSLLEIQQEEQRRAHVYAQSQLEASVADISTSLGSMNVSNPWASAV
                     GNSDPKVNKMDPASSHTSVTQESLDLKSKKSPLHDLLTEEVMEKPNERESASFQPDSI
                     DDDNFIEAKGSKKSRKKSAKSKAAAGLKPSVPENPVSSSPNEKVKNSRVAAPHDKDLL
                     TAAPAGPSLGDFVVWKGDNATPSPAPAWSTDSGKLTARSSLRDILKEQDKKVASNQRQ
                     TPVPAPQKSVSVQSSRGNVAKTASPMHNTSHGSTQTKSRVDDDLFWGPVDHPKQETNQ
                     SDFPQLANQGSWSKKTPVKGISGSLSRAADTSLASSKGKNEVSSKHSEAMDFKDWCES
                     ECIRLIGSKDTSFLEYCLKQSRSEAEILLKQNLGSYDRNHEFIDKFLNYKDFMPSDVL
                     DLAFQSQNNNSKVSRDANHVNEGSRGPNPNISNADGGAAIKVSGKKKGKKGKKISSEV
                     LGFNVVSNRIMMGEIETVED"
     misc_feature    1414..1587
                     /gene="LOC139841155"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; Region: GYF;
                     cd00072"
                     /db_xref="CDD:238027"
     misc_feature    1456..1506
                     /gene="LOC139841155"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     misc_feature    order(1486..1488,1501..1506)
                     /gene="LOC139841155"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     polyA_site      4858
                     /gene="LOC139841155"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacacacatt cgtatacaca caagctcaaa accctagctg tctccgacct cttaatcgtc
       61 ttcgcatcaa tggctaacaa aaccgaattg cttgattctc cgcatcacga tcagatctct
      121 aaagatgggc aaggttctga cagttcaatt ccgctttcac cacagtggct tctaccgaaa
      181 cccgaggaga ataagactag aactgtatct ggggaaatgc attcaagtgc cttttcagct
      241 tttgccaatc gtcatgttcc tgtgaaatca caaggaaacc ttgacccggt caatgatacc
      301 cagaagaaga aggacgtctt tcgtccttcc gtactcgaca accgtgacag gtggcgtgac
      361 gaggaacgag agacgaattc ctctgctcgt aaggacaggt ggggtgaggg cgataaagag
      421 cccggggaca cccgtaaggt ggatcgttgg actgaaaatt cttctggaag ataccgtgca
      481 ccatctgaaa gattgggtga tgcaggaaac aaggatcata acaatgacca gcttcgtgag
      541 aacaaatgga ctacccggtg gggccgtgac aataaggaaa tggataaaat ggatagtccg
      601 cgtgacaagt gggttgattc tggaaaagat gatttggata cgggtcatcc acgcccatgg
      661 aggtctagtt ctgctcttaa ccgaggaaaa gtcgagcagc cttcttatca aagtccagta
      721 tccaataagg tttcacctat ggtgggccat ggtcgaggac gtggtgaaaa tcataatcca
      781 gtgttttcaa ttggtagggg aaggggtgca gttgaaggga attcgttgaa taataaattt
      841 aatgaagaat cttctcatgt gagatatagc agggaaaagc tgattgacgt ttacaagatg
      901 actgatacga gaaatggtga aagggtagtg ttagtgccgt ctcttacaca ggaagatccg
      961 ttagagcctc ttgcacttat ttcacctaat cctgaggaat tgtttatatt aaagggcatt
     1021 gatcaagggg acatcctaag tagtggtgtc attacaaaag atggatcttt tgggcgtaac
     1081 acgggcgatg ttcagtcaaa tagaaccaag cttggtagta aagaagatct acagcttgct
     1141 gaagacagct ataaagacgg gtccgctgat cgtttcaaag aagcagaata tggtgtttcg
     1201 catgcaagga ataatgaatg gagtggcaat tctgtaaatc ctgcagcaac ttggcggcct
     1261 cagcttcaaa aggatactac taatgaacgt agtggcaatt ctgtaaatcc atactcgaaa
     1321 ggagagggac cagttatgat aaggcagcca tctggatatt tagacaggga acaagataca
     1381 aggatacaga cagtttcgca gccttctcct gaagaccttg ttctgttcta caaagatcca
     1441 cagggtttag ttcaaggtcc ttttactggc gttgatataa ttggttggtt tgaggctggt
     1501 tattttggga tagatttatt agttcgtctt gcaaatacac cacatgactc accttggagt
     1561 ttacttggtg atgtcatgcc ccatctgcgt gccaaggtta gaccaccacc tggtttcact
     1621 gcagcaaaac aaagtgaagt taatgatcgg tctggtcagt taggttccac tggcttgggt
     1681 aataataata ccatcatgaa aaatgaacaa gtattgcagc atggttcgat tacagatgca
     1741 gagaagaggt ttcttgaatc gttgatgtct aataacatgg gtggtggtgg ctcgctggag
     1801 aagttaagtt tgtctgaagg tactacacag gggtattttg gtaactcaaa ctcagttcta
     1861 cctttaggaa cagaaagcag tgataaccta taccagttag cccagcgggt acagcttgaa
     1921 aggcaaaagt caacctccaa tccttattct ttttggtctg ggagagacac gacatctgtg
     1981 ggccccacat ctaatattct tcaaaatcca accgttcaac aatcaaacat gtcacgtccc
     2041 tcaaatgtcc cgaatcccga gttcatgtca attcttcagg gtttatctga acggcctact
     2101 tctgcagtca atggtccagt tacaacttgg tcaaacctcc cggttcaggc tggtcttgac
     2161 ccgcatcaag catcccttgg aagccaccaa agacctcaac cacagaatca atatagtcca
     2221 ttaatccagg ataagtttct tgtttctggc ctttctcaag aaccacaatt actaaatctg
     2281 ttgcaacaac aacaacaata catgttacaa atgaacccac aggcaacaat acctacgcaa
     2341 cagctgtcaa tattagacga ttacttcttg cttaaacagc aacagcaaaa gcaggagttg
     2401 cagcagcaac agttattgag acagcaacta ctttcccaga tgcataatga accacattct
     2461 cagcaacatt tagtcaatca atcttatgga cagattcagt cgttggatca tctcgggttc
     2521 caacctgcat cacacgaggt gttccccatg ggatcacaaa atgtgctacc caatattcag
     2581 gatccggtaa ctacaaactt cttgaatatt cctccgattc tgccacaagc tgaaaacctt
     2641 gccgataaat ctgaaatttc agtacagtta ccccatcaaa tggtggaaaa tgatgatggt
     2701 gttcataaga gagatgctga tgacagttgc ttaaaggaac agactttaaa cgttggtctg
     2761 aaaactgatg aaaatactac attggtaaca tctcatgatg cttcgatatc tattcctgta
     2821 gtccaaattg tatctccatc agctgtgcaa aaggttgaaa gtgcaacatc taatgaggtg
     2881 aagagtattg aaccatgtga ggtcaataaa ccttctgaaa agaagtcaaa gaaacagaag
     2941 tccaagttga aatccgctga catggcaaaa acaacatcta aaacacaaca gccaaacaag
     3001 ttagatactg aagtaggtaa agtcaatgat catgagtctg aagtgcaaag tgttcagcaa
     3061 gaaaaggaac gtgtagtcac aatacatcct gacactgtat ctgatgatgt cattcaaatt
     3121 tccgagaaga agaatgaaga caccagttca tatacagttc aacgagcctg gaaacctgca
     3181 cctggtttta agccaaaatc gttacttgaa attcagcaag aagagcagcg gagggcacat
     3241 gtgtatgcgc agtcacagtt agaagctagt gttgctgata tttcaacatc tttaggttcg
     3301 atgaatgtgt ccaacccgtg ggccagtgct gttggaaatt cagatcccaa ggtaaataag
     3361 atggaccccg caagttctca tacaagtgtc actcaggaat ctttggatct taaaagcaaa
     3421 aagagcccgt tgcatgatct tttgactgaa gaagtcatgg aaaaacctaa tgaaagagag
     3481 tctgcaagtt ttcaaccaga ttcgattgac gatgacaact ttatcgaggc taaaggaagt
     3541 aaaaagagcc gtaagaagtc tgcaaaatct aaggctgctg ctggactcaa gccttcagtg
     3601 cctgaaaatc ctgttagttc aagtccaaac gagaaagtaa aaaattcacg tgtggcggca
     3661 ccacatgata aggatctatt gacagccgct ccggctggtc cgtcactcgg agattttgtt
     3721 gtctggaaag gtgacaatgc taccccttca cctgctcccg cttggtcaac tgattcagga
     3781 aaacttactg ctcgctcatc tttgagagac attttgaaag aacaagataa aaaggttgca
     3841 tccaatcagc gtcaaacacc tgtcccagct cctcaaaaat ctgtatcggt tcagtcttcc
     3901 cgtggaaatg ttgcgaagac tgcgtctcct atgcataata cgtctcacgg ttctactcaa
     3961 acaaaaagca gagtagatga cgatttgttt tggggtcccg tggatcatcc aaagcaagaa
     4021 actaaccaat cagattttcc tcaacttgca aaccagggta gttggtcaaa gaagactcct
     4081 gtaaaaggaa tttctggatc attaagccgg gctgctgata catcccttgc ctcgtccaag
     4141 ggcaaaaatg aagtgtcatc taaacattca gaggcaatgg actttaaaga ttggtgcgaa
     4201 agcgagtgca tcaggctgat tggatcaaaa gatacaagct tcttggaata ttgtttaaag
     4261 caatctagat cagaagcaga gatactacta aagcagaacc ttggatcata cgaccgcaat
     4321 cacgagttca tcgacaagtt ccttaactac aaagatttca tgccttctga cgtcctcgat
     4381 cttgccttcc aaagtcaaaa caacaactca aaggtttcca gagatgcaaa tcatgtcaat
     4441 gaaggatccc gaggtcccaa tcctaatatc agcaatgcag atggtggggc tgccatcaag
     4501 gtcagtggga agaagaaagg caaaaaaggg aaaaagatta gctcagaagt tttaggtttt
     4561 aatgttgtta gcaacaggat catgatggga gagattgaga ccgttgaaga ctgaaggctt
     4621 gtttctatgt tatagttgta aatacttgaa tacttgtatt ttgattttat taagatttca
     4681 aagagtagag ttgactgtag atggtttcaa gtttaggagc agacaacaaa ccgcagttat
     4741 gtgatgtttg gctctatcaa ttttgtgaac ttagatttaa cccaaaagca aagttggctg
     4801 gggagatctt acttttgcca tattatattg gtaacaatca tcaagttctt tgctttca
//
LOCUS       XM_071831387             732 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841156), mRNA.
ACCESSION   XM_071831387
VERSION     XM_071831387.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..732
                     /gene="LOC139841156"
                     /note="uncharacterized LOC139841156; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841156"
     CDS             1..732
                     /gene="LOC139841156"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687488.1"
                     /db_xref="GeneID:139841156"
                     /translation="MALMTTHIWRILKCPQSLWVQWIHTYRLKGKNFWDILCVAGASV
                     GWRKILAIRHVVRDRFIYELSNGLETSAWFDIWSDIGPLADVLSSHVIHAAGFILNLK
                     VRNIVVEDYGDVIKWKDVHGDLKSFSVSSVWNAIRTRAPVVSWYNMVCDMLQACDSWK
                     DVVLKLHSVASRKSVEIIVTKLIFGASVYVIWQERNARLFQKKSRTYDKVFEAIYSTI
                     RWKIMSIKWKNSLHVRNMKAIWKIH"
ORIGIN      
        1 atggcattga tgaccactca catttggcgt atcttgaaat gtcctcaatc attatgggtt
       61 caatggattc acacttatcg tttaaaagga aagaattttt gggatatatt gtgtgtagcc
      121 ggtgctagtg ttgggtggcg caagatatta gctattcgtc atgtggttcg cgatcgtttt
      181 atctatgaac tcagtaatgg tttagaaacg tcagcgtggt ttgatatttg gagtgacatc
      241 ggtccgcttg ctgatgtgct ttcaagtcac gttattcatg ctgcaggttt cattttaaac
      301 ttgaaagtga ggaatattgt ggttgaagat tatggcgatg ttattaaatg gaaggacgtt
      361 catggtgatt tgaaatcgtt ctcggttagt tcagtttgga acgccattcg cactagagct
      421 ccggttgtca gttggtacaa tatggtttgt gatatgctgc aagcctgcga ttcttggaaa
      481 gatgttgttc ttaaattgca ttctgttgca tctaggaaat ccgtagagat tattgtcaca
      541 aagcttattt ttggcgcttc agtttacgtt atttggcaag agcgcaatgc gaggttgttt
      601 caaaagaaat cgagaacata tgacaaagta tttgaagcca tatactcaac gattcgatgg
      661 aagatcatgt ctatcaagtg gaagaattcc ttacatgtta ggaatatgaa agctatttgg
      721 aaaatccatt aa
//
LOCUS       XM_071831389             534 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841157), mRNA.
ACCESSION   XM_071831389
VERSION     XM_071831389.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..534
                     /gene="LOC139841157"
                     /note="uncharacterized LOC139841157; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841157"
     CDS             1..534
                     /gene="LOC139841157"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687490.1"
                     /db_xref="GeneID:139841157"
                     /translation="MANGEIVHVKSSGTIEISPNIKLPNCLYILALSHKLLLDIRTGL
                     LIGHGTEKGGLYYVDEVSQQGEQNSQTHDTPPDNNLTSAKTTERYVLPQRVNRGIPPK
                     RYYPEKEDQRSRYPIANIAQGNLFSKAQKFNSALYSEEVPTTIDQAMKSGKWRKAMEE
                     EIEALKKNDTWDKCVIP"
ORIGIN      
        1 atggctaacg gggaaattgt tcatgttaaa agtagtggta ctatcgaaat ttcaccaaat
       61 attaaactac ctaattgtct atatattcta gctttatctc ataagctgtt attggacatc
      121 cggacaggac tattgattgg acatggcact gaaaagggag ggttatacta tgttgacgag
      181 gtttctcaac aaggagaaca aaatagtcaa acccacgata caccacccga taacaatcta
      241 acttctgcta aaaccacaga aagatatgtg ctaccacaaa gggtaaatag aggtattccg
      301 ccaaaacgat actatccaga aaaagaagat caaagatcaa ggtatcctat tgctaatata
      361 gcacaaggaa acctatttag taaagctcaa aaattcaact ctgccttata ttctgaagag
      421 gttccaacaa ccattgatca agctatgaaa tctggaaaat ggaggaaggc tatggaagaa
      481 gaaatagaag ctctcaagaa aaatgacaca tgggacaaat gtgttatacc ataa
//
LOCUS       XM_071831390            2235 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841158), mRNA.
ACCESSION   XM_071831390
VERSION     XM_071831390.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2235
                     /gene="LOC139841158"
                     /note="uncharacterized LOC139841158; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841158"
     CDS             1..2235
                     /gene="LOC139841158"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687491.1"
                     /db_xref="GeneID:139841158"
                     /translation="MTGDDDELLLIWVEFNTTSLSCHKPSTLWLRCEQRQGYSFGLEI
                     SHLIMTVDAFGFWPRCGVHYIKGCELGLLFTEDVKHFPGTGVPLLYQKYRSWSDFCGV
                     FQQAVEVPLLESKASLLGLQKRWAGRPRGVRGGCRVATIGRIRVGSWNIGTLTGKRIE
                     LVDTFLKSKVDIVCVQETRWKGEEAIEIQDYKLWYSGSRIARNGVGIFLGKLHKDNVV
                     DVGRFSDRIMSVSLIIKEETFTVISAYAPHAGLGDAEKKSFWELLDEVVRGCPADHRL
                     IIGGDLNGHIGVEAEGYEGAHGGFGFGPRNEEGRSILEFAIAHELVVANSFFKKRDAQ
                     LATFHSGGRSTQIDFLLLRKGELRTCKDCKVLPALTCSSQHRLLVMDLVTRGRVGRRA
                     RAVQPRILWKNLFGANAETFRAIVVNRLSVEEDYVAPTDADQIWNRMASTIRDVAKET
                     LGVAIGTSRAHKSRRESWWLSDDVQSKVALKQTRVEERYKEAKREAKKAVAIAKDKAY
                     EDLYRKLDSKEGANDIYRIAKARERGRRDLGNIKYIKDVAGQSIVREDLIRKRWEEYF
                     ASLFGRGRPERNGEPHEVQEFQNNCFCTRINQEEVRLALRNMGRNKAVGPDQIPIEAW
                     KCLGGDGLWERVIETRLRRETKVSENQFGFMPGRSSIESIHIVRSLMENQAGEGWRLS
                     IGPVEVKVRMRSTEPEEVGLSPTLIVSMFVIMIACLVLNLGMLDKFHSLSRVLIPHIS
                     PLQV"
     misc_feature    436..1146
                     /gene="LOC139841158"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(448..450,529..531,733..735,841..843,847..849,
                     1042..1044,1120..1125)
                     /gene="LOC139841158"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(529..531,1120..1122)
                     /gene="LOC139841158"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(733..735,847..849,1123..1125)
                     /gene="LOC139841158"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    1894..>2049
                     /gene="LOC139841158"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgactggcg atgatgatga actcttgtta atctgggtcg aattcaatac aacttcccta
       61 agttgtcaca aaccttctac tctatggctc cggtgtgaac aaagacaagg gtattcgttt
      121 ggattagaga tctcacacct cattatgaca gtggacgctt ttggattttg gcctaggtgt
      181 ggggtacatt acattaaggg ttgcgagctt ggtctattat tcaccgaaga cgttaagcat
      241 ttcccaggta caggagtgcc gcttttgtat caaaagtatc gctcctggtc agacttttgt
      301 ggagtttttc aacaggcggt agaagtgcca ctcctggagt caaaagcgtc gcttctgggt
      361 cttcaaaagc gctgggcggg taggcctaga ggggttagag gaggttgtag ggtagccacc
      421 attggtagga ttagagtggg tagttggaat ataggaacct tgactggtaa gaggattgag
      481 ctcgttgata cctttcttaa gagtaaggta gacatagtgt gtgttcaaga gactagatgg
      541 aagggtgaag aggcgataga gattcaggac tataagttgt ggtactcggg ttctaggata
      601 gcacgaaacg gggtaggtat ctttttagga aaactacata aagataacgt tgttgacgtg
      661 ggcaggttta gcgataggat tatgtcggtt agtttaatta ttaaggagga gactttcacg
      721 gtcattagtg catacgcacc tcatgcgggt ttaggtgatg cggaaaagaa gagtttttgg
      781 gaattgttag atgaggtggt gagggggtgc ccagccgacc atcgactgat tataggtggt
      841 gatctgaatg gacatatagg agtggaggca gaaggttatg agggagccca tggtggcttt
      901 gggtttggtc ctagaaatga agaggggcgc tcaattcttg agtttgccat tgcccacgag
      961 ttggtggtag caaactcttt cttcaagaag agggatgctc agttagccac attccatagc
     1021 gggggtcgca gcacccaaat tgactttttg cttcttcgta aaggggaact taggacatgt
     1081 aaggactgta aggtccttcc agctttgacg tgctcctccc agcacagatt gctggtcatg
     1141 gacctagtca ctaggggaag agttggcagg agggctaggg ctgtacaacc tagaatcctt
     1201 tggaagaacc tctttggagc gaatgcggag acttttagag cgattgttgt taatagattg
     1261 agtgtagaag aggattacgt tgcccctacg gacgcagacc agatatggaa tcgcatggcg
     1321 tccactatca gagatgtggc aaaagagacc ttaggagtgg ctatagggac atcgagagcc
     1381 cataagagta gaagagagtc gtggtggctt agtgacgatg tccaatcgaa agtcgcgtta
     1441 aagcagacga gggtagaaga aagatataaa gaagctaaaa gagaagctaa gaaggccgta
     1501 gcaattgcaa aagacaaagc atatgaagac ttgtatagaa aactagactc taaagaggga
     1561 gctaatgaca tatataggat agccaaagct agggagcgag gaaggaggga cttaggtaac
     1621 atcaaatata tcaaggatgt agcagggcaa agtatagtga gagaagacct tattaggaaa
     1681 agatgggaag aatattttgc atcccttttc ggtaggggaa gaccagagcg gaacggtgaa
     1741 ccccacgagg ttcaggagtt tcaaaacaac tgtttctgca cgaggattaa tcaggaggaa
     1801 gttagattgg ccctacgaaa tatggggaga aacaaagcag taggaccaga ccaaattccg
     1861 attgaggcgt ggaagtgcct aggaggtgac gggctttggg aaagagtgat cgagacgagg
     1921 ctcagacgcg agacaaaggt ttcagagaac caattcggct tcatgccagg acgctcatcg
     1981 attgaatcga ttcacatagt tagaagcctt atggagaacc aggccggaga agggtggaga
     2041 ctctcaatcg ggcctgtaga ggttaaagtc cgtatgaggt caaccgagcc tgaggaggtt
     2101 ggtctaagtc ctacattgat tgttagtatg tttgtgataa tgattgcatg tttggtgctt
     2161 aatcttggta tgttagataa gttccattca cttagccgag tgctaatccc ccacatttca
     2221 cccttgcagg tttaa
//
LOCUS       XM_071831391             756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841159), mRNA.
ACCESSION   XM_071831391
VERSION     XM_071831391.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..756
                     /gene="LOC139841159"
                     /note="uncharacterized LOC139841159; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841159"
     CDS             1..756
                     /gene="LOC139841159"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687492.1"
                     /db_xref="GeneID:139841159"
                     /translation="MFNTNPSDAPVVIEARIANCVVGGIYTDTGAGADIMYEHCFGSI
                     VLEVVLGKIPFKRIAHIEFLVVKANSQYNVILGRSAMMTFGAVTSTVQGMIKFPTPAG
                     IATLYAERRRAIECVQIHKTTVNPIIHEDGSVSPNPEFPDQKIIIGNTIAKETKEKLY
                     KILATNLDVFAWQDYDMTGAPRHIAEHKLGVNPNIPPVYQKKRDMAPDRTKFLRDEVK
                     KLVEAGILREVKYQTWVANPVMVRKPDNSWRCV"
ORIGIN      
        1 atgtttaata ctaatccatc tgatgctcct gtagtgattg aagctcgaat agcaaattgt
       61 gttgttggtg gaatatatac tgatacagga gcaggagcag atatcatgta tgagcattgt
      121 tttggaagca tagtcttaga agtagtattg ggaaaaatac catttaaaag aatagctcat
      181 atcgagtttt tagttgtcaa agcaaattca cagtataatg tcattttagg acgatcagct
      241 atgatgacat ttggagctgt gacgtcaacg gtacaaggaa tgataaaatt tcccacaccg
      301 gctggcatcg ccacgctata cgctgaacgg agaagagcaa tagaatgtgt acaaatacac
      361 aaaacaactg ttaatccaat tattcatgaa gatgggtcag tatcaccaaa tccagagttt
      421 ccagatcaga aaatcattat tggaaacaca atagcaaaag aaacaaagga aaagctttac
      481 aaaattttag caaccaattt agacgttttt gcgtggcaag attatgatat gactggagca
      541 ccacgtcata tagctgaaca taagcttggt gtgaatccaa atatcccacc agtatatcaa
      601 aagaaaagag atatggctcc cgatcgaaca aaatttctca gggacgaagt taaaaaatta
      661 gtggaggctg ggatattaag ggaagtaaaa taccagacat gggtagcaaa tccagtgatg
      721 gttagaaaac cagataactc atggagatgt gtatag
//
LOCUS       XM_071831392             921 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841160), mRNA.
ACCESSION   XM_071831392
VERSION     XM_071831392.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..921
                     /gene="LOC139841160"
                     /note="uncharacterized LOC139841160; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841160"
     CDS             1..921
                     /gene="LOC139841160"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687493.1"
                     /db_xref="GeneID:139841160"
                     /translation="MPDTEFDILVEELSVHNQKNSSVGLIIQGFEFQPSNMMQHDIID
                     MDNDDEEYWEKKLPDECQHFIKLSDEPLKYTTKKELYLLLCEGFLGHHGETRLWFFIR
                     KSARGMCSMLPANDILEQNYSDITLNTHAISGSRFHEVLKVTRTPQLNFKCSLEPLMF
                     ASHNIYACYFVFKFQHNQTLPGKSRILKSRCIIDGIDQGVISVDMNLYPFNIPTIKQK
                     NDDGSDRSSNTLNTPTCDIVEIQEDYIYDESSMIIERKDGWMEFMLCKPLHLLQDHKS
                     LRVELFEKTDETFSGMVIEGIEFRPFSYGG"
ORIGIN      
        1 atgcctgata ctgagtttga cattctagtt gaagaattgt cagtccataa tcaaaagaac
       61 tcttcagttg gtctcataat tcaaggattt gaatttcagc cttcaaatat gatgcagcat
      121 gatatcatag atatggataa tgatgacgag gaatactggg agaaaaagtt gccagatgaa
      181 tgtcaacatt ttattaagtt atctgacgag cctttgaaat acaccacaaa aaaggagctc
      241 tacctcctcc tttgtgaggg tttccttggt catcacggcg aaactcgatt gtggtttttc
      301 atccgcaaat cagcccgggg gatgtgttcc atgctaccag ctaacgatat cctcgaacag
      361 aattactcgg atataacttt aaatacacac gccatatctg gatccaggtt ccatgaggta
      421 ctaaaagtaa cacgcactcc acaacttaat ttcaagtgta gccttgagcc actcatgttt
      481 gcatctcaca atatctatgc atgctatttc gtatttaaat tccaacacaa ccaaactctg
      541 ccaggcaaaa gtagaatctt aaagtcacgt tgcattatag atggcattga tcaaggtgta
      601 atttcagtag atatgaattt gtatccattc aatataccaa caattaagca aaaaaatgac
      661 gatggatcag acaggtcgtc aaatacgcta aatacaccga catgtgatat tgttgagatt
      721 caagaagatt acatatatga tgaatctagt atgattattg aaagaaagga cggttggatg
      781 gagtttatgt tgtgcaaacc gttacatctg ttacaagatc acaagtcact ccgtgtagaa
      841 ttattcgaaa aaacagatga aactttcagc ggaatggtta tagaaggcat tgagtttaga
      901 ccattttctt atggtggctg a
//
LOCUS       XM_071831393             996 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139841161), mRNA.
ACCESSION   XM_071831393
VERSION     XM_071831393.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..996
                     /gene="LOC139841161"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841161"
     CDS             1..996
                     /gene="LOC139841161"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071687494.1"
                     /db_xref="GeneID:139841161"
                     /translation="MSSSLKEFEHLRIPLKNIKSATNNFGECNCIGRGGFGKVYQGKL
                     VISKKLTMVAMKRLDTKLGQGPPEFWREIMLLSTYKHENLVSLLGFCDEKGESILVYE
                     FLSNKSLDLYLSSPDLSWNQRLRICIGAARGLQYLHAPVEGSQHRVLHRDIKSANILL
                     DHNWNPKIADFGLSKFGLANQQVTYQFSTPVGTMGYCDPLYIHTGLLTKESDVYSFGV
                     VLFEVLCGRQCVQIINGGSGPNFLTVVARKCYEENTLGTIISTSLKEKISTGCLERFS
                     KIAYQCLQLERTQRPSLTKILRELQIALEYQVSFILRQILSNIKLLQVITDLLLQ"
     misc_feature    91..903
                     /gene="LOC139841161"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(91..102,109..111,115..117,160..162,166..168,
                     253..255,301..312,454..456,466..471,475..477,505..510)
                     /gene="LOC139841161"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgtcttctt ccttaaaaga gtttgaacat ctccgaattc cactcaaaaa tataaaatca
       61 gccaccaaca actttggtga atgcaattgt atcggccgtg gtggctttgg gaaggtttac
      121 cagggaaaac ttgtaatatc caagaagctt accatggttg caatgaagcg cttagatact
      181 aaacttggac aaggcccacc tgagttttgg agagaaatta tgttgctttc aacttataaa
      241 catgaaaatc tggtctctct tttaggtttt tgtgatgaga aaggtgaaag tatccttgtg
      301 tacgagtttc tatctaacaa aagccttgat ttatatttaa gtagccctga tctttcttgg
      361 aatcaacgtc ttcgtatatg tattggtgcc gcacgaggac tccaatacct tcatgctcct
      421 gttgagggga gtcaacacag agtcttgcac cgtgatatca agagtgcaaa catactttta
      481 gatcacaact ggaatccaaa aattgcagat tttggtttgt caaaatttgg ccttgcaaat
      541 cagcaagtca cttatcagtt ttctacgcct gtaggtacaa tgggttattg tgatccttta
      601 tacattcaca caggcttatt gacaaaagaa tcagatgtat attcgttcgg tgttgttttg
      661 tttgaagttc tttgcggaag acaatgtgtg cagataataa acggaggtag tggtcccaac
      721 tttttgacag tagtggcacg aaagtgctat gaagagaata cactaggtac tatcattagt
      781 actagcctta aagagaaaat ttcaacgggg tgtttggaaa ggttctcaaa aattgcgtac
      841 caatgtttac aacttgaacg cacacaacga ccatcactga ccaaaatatt gagagaactt
      901 caaatcgctt tggaatacca agtaagtttt attcttagac agatattgtc aaacataaaa
      961 ttacttcagg tcattactga tttattactc caataa
//
LOCUS       XM_071831394             873 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            FERONIA (LOC139841162), mRNA.
ACCESSION   XM_071831394
VERSION     XM_071831394.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..873
                     /gene="LOC139841162"
                     /note="receptor-like protein kinase FERONIA; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139841162"
     CDS             172..873
                     /gene="LOC139841162"
                     /codon_start=1
                     /product="receptor-like protein kinase FERONIA"
                     /protein_id="XP_071687495.1"
                     /db_xref="GeneID:139841162"
                     /translation="MVAMKRLDTKLGQGTPEFLKEVMFLSTYKHENLVTLLGFCDEKG
                     ESILVYEFLSNKSLDLHLSSTYLSWSQRLRICIGAAKGLQYLHTPGEGSQHRVLHRDM
                     KSANILLDHNWNPKISDFGLSKFGLANQPITYQYTAAVVLCGRQAIQVIKGVDGLNPL
                     TVAARKCYKENTLSTIISASVKGKISFDCLERFSKIAYQCTQPERTQRPLMTEIVNEL
                     QIALEYQVLDHCYAF"
     misc_feature    175..825
                     /gene="LOC139841162"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 aattcctaac atcacaataa tgtcttctcc cttaaaagag ttcaaacatc tccgaattca
       61 ctccaagata taaaatcagc aaccaataac tttcgagaaa gcaattatat cggcagaggc
      121 ggttttggga ccgtttacaa aggggaactt gtcatatccg acaagcttac catggttgca
      181 atgaagcgat tagatactaa acttgggcaa ggcacccctg agtttttgaa agaagtcatg
      241 tttctttcaa cttacaaaca tgaaaatctt gtcactctct taggtttttg tgatgagaaa
      301 ggtgaaagta tccttgtgta cgagtttcta tccaacaaaa gtcttgattt acatttaagt
      361 agcacttatc tgtcttggag tcaacgtctt cgtatatgta ttggggctgc aaaaggacta
      421 caataccttc atactcctgg agaggggagt caacacagag tcttgcaccg tgacatgaag
      481 agtgcaaaca tacttttgga ccacaattgg aatccaaaaa tttcagactt tggtttatct
      541 aaatttggcc ttgcaaatca gccaatcact tatcagtata ctgcggctgt agttctttgt
      601 ggaagacaag ctattcaagt aataaaagga gttgacggtc tcaatccttt gacagtagcg
      661 gcacgaaagt gctataaaga gaatacacta agtactatca ttagtgctag tgtaaaaggg
      721 aaaatttcat ttgattgttt ggaaaggttc tcaaaaattg catatcaatg tacacaacca
      781 gaacgcacac aacgaccgtt aatgactgaa attgtgaatg aacttcaaat tgctttggaa
      841 taccaagttt tggaccactg ctacgcattt tga
//
LOCUS       XM_071831395             984 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139841163), mRNA.
ACCESSION   XM_071831395
VERSION     XM_071831395.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..984
                     /gene="LOC139841163"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841163"
     CDS             1..984
                     /gene="LOC139841163"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071687496.1"
                     /db_xref="GeneID:139841163"
                     /translation="MDKAFKMFNFLIDDSDDEKIATFVNSLWEEEEEEVEGEAIQATV
                     SNESSIVAPYHRRERPDCTGRQSLTIYKKCTAAIRQMAYGTTPDMFDEYIKICEKTAA
                     QCLENFCQYVFHLFAREYLRKPTADDITLLYNFHSKKHGLLGMLGSIDCMHWEWKNCP
                     VAWQGQYTRGDQKGPSVMLEAVASQDLWIWHAFFGMAGSNNDINVLNMSPLFNTIKDG
                     TARPSPFEVNGHHYERGYYLGDGIYPDWAMLVKAPHNPIDEPRKKFKRFQESAGKDIE
                     RAFGVLQGRFAMLKTPARTLDFNKIRRHMYACIVLHNMIQENNGFVITHRE"
     misc_feature    355..960
                     /gene="LOC139841163"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataagg ccttcaaaat gtttaacttt ttaattgatg attcggatga tgaaaaaatt
       61 gctacgttcg ttaacagttt atgggaagaa gaggaagaag aagtagaagg agaggcgatt
      121 caagcgacgg tttcgaatga gtcgtcaatt gttgctccgt atcatcgaag ggagcgtccc
      181 gattgtactg gaagacaaag tttgacaata tacaaaaagt gtacggcggc catacgccaa
      241 atggcgtatg gaaccacacc tgatatgttt gacgaatata taaaaatttg tgagaaaact
      301 gctgcccaat gtctagaaaa cttttgtcaa tacgtatttc atttgtttgc aagagagtat
      361 ttgcgtaaac caaccgccga tgatattact ctgctttata attttcattc aaaaaaacat
      421 ggtttactgg gtatgcttgg tagtattgat tgtatgcatt gggagtggaa aaattgccct
      481 gttgcgtggc aagggcaata tactcgaggt gatcaaaaag gcccgtctgt tatgctcgag
      541 gcagtagcct ctcaagattt gtggatatgg catgcatttt ttggtatggc gggttcaaac
      601 aacgacatta atgttttaaa tatgtcccca ttattcaaca ccataaaaga tggcactgct
      661 cgaccttcac catttgaagt aaacgggcat cactatgaga gagggtatta tttaggtgat
      721 ggtatatacc cagattgggc tatgttggta aaagctcccc acaacccaat tgacgaacca
      781 cgcaaaaaat ttaaaaggtt tcaagaaagt gcagggaaag atattgagcg tgcatttggg
      841 gtacttcaag gtagatttgc aatgttaaaa actccggcga gaactttaga cttcaacaaa
      901 attagaagac atatgtacgc ttgtattgtc ttacataaca tgattcaaga aaacaatggt
      961 tttgtgataa ctcaccgaga gtaa
//
LOCUS       XM_071831396             453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841164), mRNA.
ACCESSION   XM_071831396
VERSION     XM_071831396.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..453
                     /gene="LOC139841164"
                     /note="uncharacterized LOC139841164; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841164"
     CDS             1..453
                     /gene="LOC139841164"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687497.1"
                     /db_xref="GeneID:139841164"
                     /translation="MGRLQVRVELDKRDIDLNSLRCPIYDDDIETVEHILIKCSLAKD
                     LWNRVYRWWNLGQVMDCNIGERFKGIQTAGVANTPSKLWQAIELICGYLIWQNRNNTI
                     FRKKKGNGPVLLNELQIKSFEWISSRSKKLKLDWNQWLLNPSSFDDHG"
     misc_feature    <4..135
                     /gene="LOC139841164"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggtagat tacaggtgag agtcgaactg gataagcggg atatcgacct taattcgtta
       61 agatgtccga tttatgatga tgatattgaa actgtcgagc acatactaat taagtgctca
      121 cttgcaaaag acctatggaa tcgtgtgtat cgttggtgga atctaggtca agtgatggat
      181 tgtaacattg gtgaaaggtt caaaggaatt caaaccgccg gcgtagcaaa cacaccatca
      241 aaactatggc aagcaatcga gttgatatgt ggttacttga tttggcaaaa tagaaataac
      301 acaatttttc ggaagaagaa aggaaatggt ccggtgctac ttaatgagct acaaataaaa
      361 tcatttgaat ggatatcgag tcggtcgaag aagctaaagt tagattggaa tcaatggctt
      421 cttaatcctt catcgtttga cgatcacggc tga
//
LOCUS       XM_071831397             955 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nudix hydrolase 23,
            chloroplastic-like (LOC139841165), mRNA.
ACCESSION   XM_071831397
VERSION     XM_071831397.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..955
                     /gene="LOC139841165"
                     /note="nudix hydrolase 23, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139841165"
     CDS             1..858
                     /gene="LOC139841165"
                     /codon_start=1
                     /product="nudix hydrolase 23, chloroplastic-like"
                     /protein_id="XP_071687498.1"
                     /db_xref="GeneID:139841165"
                     /translation="MLRSIHYLGSSLFYQRSKLFHRNHHPLISISAKSSLSLRRPPPL
                     LLTTSRTPRCFRQFRSSSIRSESNTDVTSSSSSPSSPTFKSTGKKINFCQLCGGPTKH
                     EIPDNEEKERAICTLCGKISYENPKMVVGCLIEHDNKILLCKRNIQPSFGLWTLPAGY
                     LEIGESASEGAIRETWEEAGAKVKVISPFAQLDIPLIGHTYIIFLAKLIMPHFSPGPE
                     SLECRLFALEDIPYESLSFSSMLITLNLYNEDIKVGRPKFHYVNVNKRPGTGPSEIHA
                     YTLDYHLRT"
     misc_feature    271..363
                     /gene="LOC139841165"
                     /note="Nudix N-terminal; Region: Nudix_N_2; pfam14803"
                     /db_xref="CDD:464323"
     misc_feature    376..741
                     /gene="LOC139841165"
                     /note="uncharacterized NUDIX hydrolase subfamily; Region:
                     NUDIX_Hydrolase; cd04511"
                     /db_xref="CDD:467545"
ORIGIN      
        1 atgcttagga gcatacatta tctgggttct tctttattct atcaaagatc aaaacttttt
       61 catagaaatc atcatccatt aatttcaatt tctgcaaaat catcattatc tttaagaaga
      121 ccaccacccc ttttattaac aacttcaaga acacctcgtt gctttcgtca atttcgatca
      181 tcttctattc gttctgaatc aaacacagat gtaacatcat catcatcctc accctcatct
      241 cccactttta aatcaactgg aaaaaaaata aatttctgtc aattgtgtgg tgggcccaca
      301 aagcacgaaa taccggataa tgaggagaaa gagcgagcta tttgcaccct ttgtggaaaa
      361 atttcatacg agaatccaaa aatggtggta ggttgcttaa ttgagcatga taacaagatc
      421 ttgctatgta agcgaaatat ccaaccatct tttggccttt ggacacttcc ggctggttac
      481 ttggagattg gggaatcggc ttcagaagga gcgattaggg aaacgtggga agaagcaggg
      541 gctaaagtga aagttatttc ccctttcgct caattagaca tccctctcat aggccatact
      601 tatattattt tcttggcaaa gttaataatg ccgcactttt caccgggccc cgaatcctta
      661 gagtgtcgac tttttgcact tgaagacatc ccttatgaat ctctttcctt ttcatcaatg
      721 ctcattacct taaatctgta caatgaggac attaaggttg gacgaccaaa atttcactac
      781 gtgaacgtca acaagaggcc tgggacgggt ccatcagaaa ttcatgcata tactcttgac
      841 tatcatctgc gaacgtgacc agaagggcac aagttgagat agtgaaccat ttcattttgg
      901 aaaatgtgac tcatagtttt agctttgtga caatacgcaa actatccctg atgta
//
LOCUS       XM_071831398             495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841166), mRNA.
ACCESSION   XM_071831398
VERSION     XM_071831398.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139841166"
                     /note="uncharacterized LOC139841166; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841166"
     CDS             1..495
                     /gene="LOC139841166"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687499.1"
                     /db_xref="GeneID:139841166"
                     /translation="MVQPFFVTNKLFDYIDGTIPRPPKNVPSSEKDEETQSQTPNPNY
                     INWVSNDAHIRMLLISTISEASFQHVQGETSRDLWLSLERAYTPHTSSREYTLKTQLL
                     RLQMKPDETTADYLTRTQEYDVALANIGEKMKEKDLVMLVISGLREEYNGLKSSLLGK
                     APYL"
     misc_feature    169..>465
                     /gene="LOC139841166"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggttcaac cgttcttcgt caccaacaaa ttatttgact atattgatgg cacaatccct
       61 cgtccaccta aaaatgtccc atcatcagaa aaagatgaag aaacacagtc tcaaacgcca
      121 aaccccaatt acattaattg ggtctctaat gatgctcata taagaatgct cctcatttct
      181 accatctctg aagcatcatt ccaacatgtt caaggagaaa cgtctcgtga tctctggttg
      241 tcccttgagc gtgcctacac tcctcacact tcctctcgag aatacacttt gaaaacccaa
      301 cttctcagac tacagatgaa gccagatgaa acaaccgcag actacctaac aaggactcaa
      361 gaatacgatg ttgcgctcgc taacataggt gaaaagatga aagaaaaaga tttggtgatg
      421 ctagttatat caggactacg agaggaatac aacggtttaa aatcaagcct tctgggcaaa
      481 gccccctact tgtag
//
LOCUS       XM_071831400             597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 23 kDa jasmonate-induced
            protein-like (LOC139841169), mRNA.
ACCESSION   XM_071831400
VERSION     XM_071831400.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..597
                     /gene="LOC139841169"
                     /note="23 kDa jasmonate-induced protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841169"
     CDS             1..597
                     /gene="LOC139841169"
                     /codon_start=1
                     /product="23 kDa jasmonate-induced protein-like"
                     /protein_id="XP_071687501.1"
                     /db_xref="GeneID:139841169"
                     /translation="MSTPKNVFGEPVTEGSRLERARNALNNPNEGGKHDAALAFIRDA
                     KKESGDGVSTLCIFYNASGVSLLFAQQDSSYGKFYTSVPDRVQNGQWGAFLHTKKSAE
                     ASGSVGLVVYRFRLNDADHAKLFFSWETPWGLYKNKAYCDVVDDNANINPSDIYGKMY
                     EKDAKQYSVTKDGMYANAKIEYGTSPLYEAKLTMEDAA"
ORIGIN      
        1 atgagtactc ctaagaacgt gttcggtgag cctgtgacgg aaggatctcg cctggagagg
       61 gcacgcaacg ctctaaacaa tccaaatgaa ggtggcaagc atgacgcagc acttgctttt
      121 atcagggatg caaaaaaaga atctggtgat ggtgtttcaa cattatgcat cttttataat
      181 gcttccggtg tgtccttgct ttttgctcag caagattctt cgtatggaaa attctatact
      241 tcggttccgg atagagtcca gaatgggcag tggggtgcgt ttttgcatac caaaaagtct
      301 gctgaagctt ctggctcggt tgggttagta gtatatcgtt tcaggttaaa cgatgctgat
      361 catgccaaac tgttcttttc ttgggagacc ccttggggcc tatataaaaa taaagcctac
      421 tgtgatgtcg tggatgataa tgcgaatatt aaccctagcg atatctatgg caagatgtac
      481 gaaaaagacg caaaacaata ttctgttacg aaggatggaa tgtatgcgaa tgcaaaaatt
      541 gagtacggca cctcaccttt gtatgaagcg aaactcacta tggaagacgc agcctag
//
LOCUS       XM_071831401             536 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit DAD1-like (LOC139841170), mRNA.
ACCESSION   XM_071831401
VERSION     XM_071831401.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..536
                     /gene="LOC139841170"
                     /note="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit DAD1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 29 Proteins"
                     /db_xref="GeneID:139841170"
     CDS             1..348
                     /gene="LOC139841170"
                     /codon_start=1
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit DAD1-like"
                     /protein_id="XP_071687502.1"
                     /db_xref="GeneID:139841170"
                     /translation="MFRRSECGRLIAFGVEVAPPLASFLCSKIIDLYVVFAVSTALIQ
                     VAYMAIVGSFPFNSFFSGVLSCVGTAVLAVCLRIQVNKENKEFKDLPPERAFANFVLC
                     NLVLHLVIMNFLG"
     misc_feature    82..345
                     /gene="LOC139841170"
                     /note="DAD family; Region: DAD; pfam02109"
                     /db_xref="CDD:460448"
     polyA_site      536
                     /gene="LOC139841170"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgtttcgcc ggagtgaatg tgggcgattg attgcttttg gggttgaggt ggctccacct
       61 ctggcgagct tcctttgttc aaagatcata gatctttacg tcgtttttgc tgtatctaca
      121 gctctaattc aggtggctta tatggccata gttggatcgt tcccattcaa ctcttttttc
      181 tcgggcgtgc tttcttgtgt agggacagct gtcctagctg tttgtcttcg tattcaagtc
      241 aacaaagaaa acaaggaatt caaggattta cctccagagc gtgcttttgc aaattttgtt
      301 ttatgcaatt tggtgctgca tttggtgatt atgaatttcc ttggataaac cgcatcttta
      361 gacagatatg ctatatgaat gcattgagat aaggaagtaa gaatagatct gtggttttgc
      421 ttggtaatgc tgagacttga tatctgtact ggcagtagga taattatatt gaccctttac
      481 aacttcaatt aataaattgg tttggtaatt gcaataacat atactccttt ggttca
//
LOCUS       XM_071831402            1137 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent DNA helicase
            PIF1-like (LOC139841171), mRNA.
ACCESSION   XM_071831402
VERSION     XM_071831402.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1137
                     /gene="LOC139841171"
                     /note="ATP-dependent DNA helicase PIF1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139841171"
     CDS             1..1137
                     /gene="LOC139841171"
                     /codon_start=1
                     /product="ATP-dependent DNA helicase PIF1-like"
                     /protein_id="XP_071687503.1"
                     /db_xref="GeneID:139841171"
                     /translation="MVNRRCVEALDRSLHDICRTVNPNSNETPFGGKVVVFGGDFRQV
                     VPVITRGKREDIVDASLNSSYIWDHVTVLKFTVNMRLSNASLNNSDEDYQDNLSDIRK
                     FVDWLLDVSNGNVNPSEDGISEIEMPEDILVKDIHNPFGSIINVIYHDFLDNLGNPTY
                     YEQRAILAPTHEVVNIINDRMMQFLEGEERSYLSSYSICQSERDSHFNSELYTTEYLN
                     SINIGGIPKHDLQLKVGVPVMLLRNIDQAGGLCNDTRLQIVELKDKVIKAKILTRTHV
                     GTITAIQRMLMVPSDKRIPFRFQRRQYPISVCFAMTINKSQGQSLAHVGLFLPKPVFS
                     HGQLYVALSRVTSKKGLKVSILNKDNQFSDITNNVVFKEVLQHL"
     misc_feature    <1..783
                     /gene="LOC139841171"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    769..1053
                     /gene="LOC139841171"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    order(817..828,934..936,940..945)
                     /gene="LOC139841171"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350196"
     misc_feature    952..954
                     /gene="LOC139841171"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggtaaatc gcaggtgtgt agaagcgtta gatcgctcat tacatgacat ttgtcgaaca
       61 gttaatccta atagtaatga aactccattc ggaggaaaag tcgtggtttt cggaggggat
      121 tttagacaag tggtacccgt tattactcgt ggaaaaagag aggatatcgt ggatgcttca
      181 cttaattctt catacatatg ggatcatgtt actgttttaa aatttacagt taacatgaga
      241 ctatctaacg cttctttaaa taattctgat gaagattacc aagacaattt gtccgatatt
      301 cgtaagtttg tagattggtt gttagacgtc agtaatggta atgtcaaccc aagtgaagac
      361 gggatttcag agatagaaat gcctgaagac attttagtga aagacataca caatcctttc
      421 ggttctatta ttaatgttat ttatcatgat tttctcgata accttggtaa tcccacttac
      481 tacgaacaac gtgcaatcct tgctccaact cacgaagtgg taaacatcat taatgatcgt
      541 atgatgcagt ttctcgaagg tgaagaaaga tcatatttaa gctcctatag catttgccaa
      601 tctgaacgag actcacattt caatagtgag ctatacacaa ccgagtatct taatagcatt
      661 aacataggtg gtataccaaa gcatgatcta caactgaagg taggagtacc agttatgctt
      721 cttaggaata tagatcaggc tggtggtttg tgcaatgata cacggttgca aatcgttgag
      781 cttaaagata aagtcataaa ggcaaaaatt ttgactagaa ctcatgttgg tacaattaca
      841 gctattcagc gaatgttaat ggttccttca gataagcgaa ttccattcag attccagaga
      901 agacaatacc ctatctctgt ttgctttgca atgactatta ataaaagtca gggacaatca
      961 ttagcacatg taggattatt tcttccaaaa cctgttttca gtcacgggca actgtatgta
     1021 gctctatcta gagttacttc taagaaaggg ctaaaggttt ccattttgaa caaagacaac
     1081 caattttccg acataactaa taatgttgtg ttcaaagaag tattacaaca tctatag
//
LOCUS       XM_071831403            1446 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841172), mRNA.
ACCESSION   XM_071831403
VERSION     XM_071831403.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1446
                     /gene="LOC139841172"
                     /note="uncharacterized LOC139841172; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841172"
     CDS             1..1446
                     /gene="LOC139841172"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687504.1"
                     /db_xref="GeneID:139841172"
                     /translation="MASNHMLIIKQINPKRVFVNLRVKLLSMETMSNINFDQGPEFRD
                     LIVSDEEGDRIGVPIKNFYKPKYEALLKIQHNYNIRNAFVGTNPFKGRMTHYNHESKL
                     NINHKTSVLPLPESEWNGENGFKFILFDEILDENKTVEHVTADVIGRVSNYSLEKQYR
                     DGDDLQSKYIVIELKDLNDNLLSCTLWGTFIREFQKRLKEASDQDCVILIVQFGRTKK
                     HCDMIVRSDWNFTQVSLNADVEPDSQTSLAPTLTPPGKQVDGWFNQVTCVGCNELPIC
                     GPGLHAIQAQIIVVLPDDEWSYIGCRKCHRIAKLTKPVVDLTLDIDALMLVKRRCNSA
                     RCHDNPQVCVRYKVNVRVEDTTDESNRTESLTLFETQVEVSEYNLKQSNPIFTVKDAS
                     EDEAFVEKFVEEYKKEKTNNSAKLKLLDDLIESSSTKCGSSNGSDDTPTVDLSNTIEY
                     TPPKKVVKQEGRESPLSVKSTTSMVQKNLNP"
     misc_feature    61..330
                     /gene="LOC139841172"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(73..81,121..123,133..141,145..147,166..174,178..180,
                     223..225,247..255,301..309)
                     /gene="LOC139841172"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(226..228,232..234,238..240,325..327)
                     /gene="LOC139841172"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    433..720
                     /gene="LOC139841172"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(433..435,619..621,625..627,631..633,691..693)
                     /gene="LOC139841172"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(448..456,511..522,526..528,547..555,559..561,
                     616..618,643..651,667..675)
                     /gene="LOC139841172"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
ORIGIN      
        1 atggcatcta atcacatgct tataatcaag caaatcaatc ctaaaagagt ttttgttaat
       61 ctcagggtca agctattgtc catggaaaca atgtcgaaca taaatttcga tcagggtcct
      121 gaatttcgag acctgatagt ttctgatgag gagggtgata ggataggtgt tccaatcaag
      181 aatttctata agcctaagta tgaggcttta ctaaaaatac aacataacta taatattagg
      241 aacgcttttg ttggtactaa tccttttaaa ggaaggatga ctcattataa tcatgaatct
      301 aaattgaata tcaatcacaa aacatctgtg ttgccacttc cagaaagtga atggaacggt
      361 gaaaatggtt tcaaattcat tctgtttgat gaaatacttg atgaaaacaa aacagtggag
      421 catgtgactg cagatgtcat tggtagggtc tcaaattaca gtttagagaa gcagtatcgt
      481 gatggtgatg atctgcaatc aaaatatatt gtgatcgagt tgaaggatct aaatgataat
      541 cttctatcct gcactttgtg gggaaccttc ataagggaat ttcaaaaacg gttgaaggaa
      601 gcatccgatc aagactgtgt catactaatc gtccagtttg gcagaacaaa aaagcactgc
      661 gatatgattg tacgttctga ttggaacttc actcaagtgt cattgaatgc tgatgttgaa
      721 cctgactcgc aaacatcatt ggcacccaca ctcactccac caggaaagca agttgatggg
      781 tggtttaatc aagttacttg tgtaggctgt aatgagttac ctatatgcgg ccctggtctt
      841 catgctattc aagcacagat tattgttgtg ctccccgatg atgaatggtc gtatattgga
      901 tgtcgaaagt gccatcgaat tgctaaacta accaaacctg ttgtggacct aacacttgat
      961 attgatgcac tcatgttagt caagcgtagg tgtaatagtg ctagatgcca tgataatcca
     1021 caagtttgtg tcaggtacaa ggttaatgtt cgtgtagaag atacaactga tgaatcaaat
     1081 agaacggaat ccttgacact gtttgagacg caagttgaag ttagcgaata taatctcaaa
     1141 cagtctaatc ccatctttac tgtcaaggat gcaagtgagg atgaagcgtt tgtggaaaag
     1201 tttgttgaag aatataaaaa agagaagaca aataattctg ctaagctcaa acttttagat
     1261 gatttgattg agtcatcttc aaccaagtgt ggttcttcta atggatctga tgatactcca
     1321 acggttgatc tttcaaacac tatcgaatat acaccaccaa aaaaggttgt caagcaagag
     1381 ggcagagaaa gtccgctgtc agtgaagtca accacttcta tggtccagaa aaatctcaac
     1441 ccatag
//
LOCUS       XM_071831404             786 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAC domain-containing
            protein 90-like (LOC139841173), mRNA.
ACCESSION   XM_071831404
VERSION     XM_071831404.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..786
                     /gene="LOC139841173"
                     /note="NAC domain-containing protein 90-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139841173"
     CDS             1..786
                     /gene="LOC139841173"
                     /codon_start=1
                     /product="NAC domain-containing protein 90-like"
                     /protein_id="XP_071687505.1"
                     /db_xref="GeneID:139841173"
                     /translation="MEEEMGVIVPGFRFYPTEEELLTFYLKNKIKGQNALLLQHIDRV
                     IPQLHVYDYYPWDLPQYAGERCQGDPEQWFFFIPRQEKEARGGRPSRLTRTGYWKATG
                     SPTIVYSSTNRVIGVKRTMVFYNGRAPTGTKTKWKMNEYKAFQEQTSTNTNQKPELME
                     EVSLCRVYVKSNNLRAFDRRPSGVNINEQVRIPETLHNNENQATTSTASIHTPIIEMG
                     TTSISDDHSYNSSDDQTVNHSHSTMESTDDQPLWDWDELDQWF"
     misc_feature    28..423
                     /gene="LOC139841173"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
ORIGIN      
        1 atggaggaag aaatgggcgt gatcgtaccg ggatttagat tctacccaac agaagaagag
       61 ttgttaactt tctatttaaa gaacaagatc aaaggccaga acgccttact cctacaacat
      121 atcgatcgag tcatacctca acttcatgtt tacgattact atccgtggga tctacctcaa
      181 tatgcaggag agcgttgtca aggagatcca gaacaatggt tctttttcat tcctagacaa
      241 gagaaagaag caagaggagg acgaccatct cgtctcacga gaaccggcta ttggaaggcc
      301 accgggtctc caaccattgt ttactcgtct actaatcgag tcatcggggt caagagaacc
      361 atggttttct acaatggtag agctcctact ggaacaaaga caaaatggaa gatgaatgaa
      421 tacaaggctt ttcaagaaca aacctccaca aacactaacc aaaaacctga gttaatggaa
      481 gaggtaagtt tgtgtcgagt atacgtgaaa tcgaataact tgagggcgtt cgacagaaga
      541 ccatcaggag tgaacataaa cgagcaagta cgaattccgg aaacccttca taacaatgaa
      601 aatcaagcaa caacatcaac tgcttctata catacaccga taatagagat ggggacaaca
      661 agcatatctg atgatcatag ctataactcg tcagatgacc aaactgttaa tcattcccat
      721 tctacaatgg agagtactga tgatcaacct ttgtgggatt gggatgaact tgatcaatgg
      781 ttctaa
//
LOCUS       XR_011757395            3098 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841174), transcript variant X1, ncRNA.
ACCESSION   XR_011757395
VERSION     XR_011757395.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3098
                     /gene="LOC139841174"
                     /note="uncharacterized LOC139841174; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841174"
     ncRNA           1..3098
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841174"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139841174"
ORIGIN      
        1 tcaataattc agttgttcca aatcaacata ttgaagtcgg tcaataattt gtaactgaat
       61 ttgttagggt taaattctag cacatttgga gaaaagtgta tgaattagca gtattatgtg
      121 aataaagatt tgcctcaagt gatcattggg tatgggtcgt taagttcagg ttcaatgagc
      181 agctcaccaa aaatcatcgt ataactgttt tggttcttaa gcttgctcta tatggtgatg
      241 cagggtaaag acttctacac gaaaggcatc ttttacataa atttgttgaa gtctcatcat
      301 aagactgtta cattgctttc cctgagcatt tcagttactt ttgtcttagt gaacactctt
      361 aatttgaagt tgaccgctgg tgatttcagt aaggttgttc tctaggtgaa ctgattccat
      421 taagactttg ttgttgttgc tgatagggat cctgtaaata tatacggcca atggtcgggt
      481 tgggtaacag ctcataagtg ggtgattggt gtgatgttat gaattgcatt cttatgctaa
      541 atttatggtg tttttacagt agtgaacttg tgatataagt tctatgtgga aatatagatc
      601 tatgttatag aagttttgct ttaaatgatt tttattgatg atagttattt gttaatattt
      661 tatgccaggt acttctttta aaacttatat cacaagttca ctactgccat ttctataata
      721 gattcaatgg ttcttattca tattgctagg gtatacctaa gtatttgttt tatatgattt
      781 ggttaacgtt cgtgttattt gccagtgaga tatgaagatt gaggacacgg agccctgcac
      841 tacggctaaa tatatattat tttagttata cgaatgtgtt taacatgtta ttatggttga
      901 ctttatgtca atgatataac tcaatttact aattgtatta gttattttgc agtcatatct
      961 gctgcaggcg agacctaaat ccatagttgg cacccctcca tacattgctt ctgaggttct
     1021 tcttcgttaa taatatgatg gaagggtaca acatttcgac tattatattc agattcaatc
     1081 gtatcttgca attatatcac cgattgtgta taagattttt aattcggagg acatgtggtc
     1141 ttgtgaagta acgctttacg tgatgcccgt gggagcatat atcctttaaa gatgaagaaa
     1201 atcccaagaa ctataggaag acgatcaaag ttactaacct ttttactttc tctattataa
     1261 catgtccatt gcctttatga cactgtttac cctccccaca atgatggctc tgttgtcttg
     1321 gggagggttg cattgcttct tcttcagagt cttcttggtc atcaataaaa catgtcccta
     1381 atagaactga tcttattttt ggaccattta cttgccttat ctttttcagc acattatgtc
     1441 tgtccattta cttgccttat cttttcagca cattcagttt cacggatatt tgttgctgca
     1501 gcttcagttt cactcataat atcaagactg tctacctctt tcactggtag tgtgcaatgc
     1561 aataaggttg cagatatggt ggatttacta caccaataac atgtcatgta agatggcgag
     1621 ggttaccttc attgtcttta atatttaggg ctgctggtgt taaatgtgat acatgtttgg
     1681 agctcttctt tgtgttatac tagttcatat tcgtgaccat ttatagcaca tcggggatat
     1741 gcaacttatt gtttttgttg ttgaatcact cgaagaaaaa caagaatggc tacatcatgg
     1801 aggtaattta agtgttgctt atttaccatt tttatccact ttgtgcgtct tgcttgagat
     1861 ttttaatttg gcagctaaca cctaaaacat tagctgatgt gataggtggt acactaaatc
     1921 cagtggtgtg aaagttcaga tgtgtaacta ttatcacaat ataatatgtt acatctaact
     1981 aagaaatcct cctattacat agaaatggat gtgaaagttc atatgtgtat ctagccattt
     2041 tatagagatg gaggggttca attgccgatg gagatgtcca atccttgtaa ataataacgg
     2101 gaattgacga taaagttcat atcagatgtc aatggtaccg ggtaagtcca ctacgtagag
     2161 tattatattt attgcctttt ctgcttaatc tgatgtttta gattgcggca actatttttt
     2221 attatgtagc acttgggatg aatgtgtact gacaaaggat acaatacata ctctaacagt
     2281 tgaaagtgct tcaggttata ctataatcgt taaagtaacg aaattacata gtactgggta
     2341 tgactgctac ttctgcagcc taaaggtaat atgtatcaga ttttgatatg gggaaataat
     2401 tgtgtaaaaa aagtgtagat tggcagggac accttaaccc tgtgttgcct ttggcaaccc
     2461 accaagccaa ccccgtaata gccggatgcc tgtaaatcac ctccaccgaa taccccatga
     2521 gtggcaagca cgagcctaac ccgaaggcat actccgaggg aattgctccc cccgggactc
     2581 gaacctgcgc cattttgtgt aaagcttcca aacatggggc cccagcttca aagggacggg
     2641 taccgttgaa gcactgcttc tttggtatat ggggaaataa ttatcctatg cttatactcc
     2701 ttgtgaaatt cataagtggt aaaggttcat caccaatgtc gtaactactc taaaaatacc
     2761 atatgtcgat aattgtatgc tatatttatt agtatagtgt ttcacaaata cacaactcaa
     2821 atatgggttc atttgaatct actaactgct ggaatacgag tctatgtttg taaacatagt
     2881 atctacaacc atagaaactt attttttttg ttggcataat attaaaccaa agcaccctct
     2941 taattttatg tttcatcatg atccattaat agttatgtca gttttttgtt attctgtgat
     3001 caacacggag taatttaatt ttttaatata tacatgggtt tcaaatctgt aagtttaata
     3061 ttttgtttgt cgttaagggt tcaatttcat attttgtc
//
LOCUS       XR_011757396            2995 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841174), transcript variant X2, ncRNA.
ACCESSION   XR_011757396
VERSION     XR_011757396.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2995
                     /gene="LOC139841174"
                     /note="uncharacterized LOC139841174; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841174"
     ncRNA           1..2995
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841174"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139841174"
ORIGIN      
        1 tcaataattc agttgttcca aatcaacata ttgaagtcgg tcaataattt gtaactgaat
       61 ttgttagggt taaattctag cacatttgga gaaaagtgta tgaattagca gtattatgtg
      121 aataaagatt tgcctcaagt gatcattggg tatgggtcgt taagttcagg ttcaatgagc
      181 agctcaccaa aaatcatcgt ataactgttt tggttcttaa gcttgctcta tatggtgatg
      241 cagggtaaag acttctacac gaaaggcatc ttttacataa atttgttgaa gtctcatcat
      301 aagactgtta cattgctttc cctgagcatt tcagttactt ttgtcttagt gaacactctt
      361 aatttgaagt tgaccgctgg tgatttcagt aaggttgttc tctaggtgaa ctgattccat
      421 taagactttg ttgttgttgc tgatagggat cctgtaaata tatacggcca atggtcgggt
      481 tgggtaacag ctcataagtg ggtgattggt gtgatgttat gaattgcatt cttatgctaa
      541 atttatggtg tttttacagt agtgaacttg tgatataagt tctatgtgga aatatagatc
      601 tatgttatag aagttttgct ttaaatgatt tttattgatg atagttattt gttaatattt
      661 tatgccaggt acttctttta aaacttatat cacaagttca ctactgccat ttctataata
      721 gattcaatgg ttcttattca tattgctagg gtatacctaa gtatttgttt tatatgattt
      781 ggttaacgtt cgtgttattt gccagtgaga tatgaagatt gaggacacgg agccctgcac
      841 tacggctaaa tatatattat tttagttata cgaatgtgtt taacatgtta ttatggttga
      901 ctttatgtca atgatataac tcaatttact aattgtatta gttattttgc agtcatatct
      961 gctgcaggcg agacctaaat ccatagttgg cacccctcca tacattgctt ctgaggttct
     1021 tcttcgttaa taatatgatg gaagggtaca acatttcgac tattatattc agattcaatc
     1081 gtatcttgca attatatcac cgattgtgta taagattttt aattcggagg acatgtggtc
     1141 ttgtgaagta acgctttacg tgatgcccgt gggagcatat atcctttaaa gatgaagaaa
     1201 atcccaagaa ctataggaag acgatcaaag ttactaacct ttttactttc tctattataa
     1261 catgtccatt gcctttatga cactgtttac cctccccaca atgatggctc tgttgtcttg
     1321 gggagggttg cattgcttct tcttcagagt cttcttggtc atcaataaaa catgtcccta
     1381 atagaactga tcttattttt ggaccattta cttgccttat ctttttcagc acattatgtc
     1441 tgtccattta cttgccttat cttttcagca cattcagttt cacggatatt tgttgctgca
     1501 gcttcagttt cactcataat atcaagactg tctacctctt tcactggtag tgtgcaatgc
     1561 aataaggttg cagatatggt ggatttacta caccaataac atgtcatgta agatggcgag
     1621 ggttaccttc attgtcttta atatttaggg ctgctggtgt taaatgtgat acatgtttgg
     1681 agctcttctt tgtgttatac tagttcatat tcgtgaccat ttatagcaca tcggggatat
     1741 gcaacttatt gtttttgttg ttgaatcact cgaagaaaaa caagaatggc tacatcatgg
     1801 aggtggtaca ctaaatccag tggtgtgaaa gttcagatgt gtaactatta tcacaatata
     1861 atatgttaca tctaactaag aaatcctcct attacataga aatggatgtg aaagttcata
     1921 tgtgtatcta gccattttat agagatggag gggttcaatt gccgatggag atgtccaatc
     1981 cttgtaaata ataacgggaa ttgacgataa agttcatatc agatgtcaat ggtaccgggt
     2041 aagtccacta cgtagagtat tatatttatt gccttttctg cttaatctga tgttttagat
     2101 tgcggcaact attttttatt atgtagcact tgggatgaat gtgtactgac aaaggataca
     2161 atacatactc taacagttga aagtgcttca ggttatacta taatcgttaa agtaacgaaa
     2221 ttacatagta ctgggtatga ctgctacttc tgcagcctaa aggtaatatg tatcagattt
     2281 tgatatgggg aaataattgt gtaaaaaaag tgtagattgg cagggacacc ttaaccctgt
     2341 gttgcctttg gcaacccacc aagccaaccc cgtaatagcc ggatgcctgt aaatcacctc
     2401 caccgaatac cccatgagtg gcaagcacga gcctaacccg aaggcatact ccgagggaat
     2461 tgctcccccc gggactcgaa cctgcgccat tttgtgtaaa gcttccaaac atggggcccc
     2521 agcttcaaag ggacgggtac cgttgaagca ctgcttcttt ggtatatggg gaaataatta
     2581 tcctatgctt atactccttg tgaaattcat aagtggtaaa ggttcatcac caatgtcgta
     2641 actactctaa aaataccata tgtcgataat tgtatgctat atttattagt atagtgtttc
     2701 acaaatacac aactcaaata tgggttcatt tgaatctact aactgctgga atacgagtct
     2761 atgtttgtaa acatagtatc tacaaccata gaaacttatt ttttttgttg gcataatatt
     2821 aaaccaaagc accctcttaa ttttatgttt catcatgatc cattaatagt tatgtcagtt
     2881 ttttgttatt ctgtgatcaa cacggagtaa tttaattttt taatatatac atgggtttca
     2941 aatctgtaag tttaatattt tgtttgtcgt taagggttca atttcatatt ttgtc
//
LOCUS       XR_011757397            2859 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841174), transcript variant X3, ncRNA.
ACCESSION   XR_011757397
VERSION     XR_011757397.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2859
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2859
                     /gene="LOC139841174"
                     /note="uncharacterized LOC139841174; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841174"
     ncRNA           1..2859
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841174"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139841174"
ORIGIN      
        1 tcaataattc agttgttcca aatcaacata ttgaagtcgg tcaataattt gtaactgaat
       61 ttgttagggt taaattctag cacatttgga gaaaagtgta tgaattagca gtattatgtg
      121 aataaagatt tgcctcaagt gatcattggg tatgggtcgt taagttcagg ttcaatgagc
      181 agctcaccaa aaatcatcgt ataactgttt tggttcttaa gcttgctcta tatggtgatg
      241 cagggtaaag acttctacac gaaaggcatc ttttacataa atttgttgaa gtctcatcat
      301 aagactgtta cattgctttc cctgagcatt tcagttactt ttgtcttagt gaacactctt
      361 aatttgaagt tgaccgctgg tgatttcagt aaggttgttc tctaggtgaa ctgattccat
      421 taagactttg ttgttgttgc tgatagggat cctgtaaata tatacggcca atggtcgggt
      481 tgggtaacag ctcataagtg ggtgattggt gtgatgttat gaattgcatt cttatgctaa
      541 atttatggtg tttttacagt agtgaacttg tgatataagt tctatgtgga aatatagatc
      601 tatgttatag aagttttgct ttaaatgatt tttattgatg atagttattt gttaatattt
      661 tatgccaggt acttctttta aaacttatat cacaagttca ctactgccat ttctataata
      721 gattcaatgg ttcttattca tattgctagg gtatacctaa gtatttgttt tatatgattt
      781 ggttaacgtt cgtgttattt gccagtgaga tatgaagatt gaggacacgg agccctgcac
      841 tacggctaaa tatatattat tttagttata cgaatgtgtt taacatgtta ttatggttga
      901 ctttatgtca atgatataac tcaatttact aattgtatta gttattttgc agtcatatct
      961 gctgcaggcg agacctaaat ccatagttgg cacccctcca tacattgctt ctgaggttct
     1021 tcttcgttaa taatatgatg gaagggtaca acatttcgac tattatattc agattcaatc
     1081 gtatcttgca attatatcac cgattgtgta taagattttt aattcggagg acatgtggtc
     1141 ttgtgaagta acgctttacg tgatgcccgt gggagcatat atcctttaaa gatgaagaaa
     1201 atcccaagaa ctataggaag acgatcaaac acattcagtt tcacggatat ttgttgctgc
     1261 agcttcagtt tcactcataa tatcaagact gtctacctct ttcactggta gtgtgcaatg
     1321 caataaggtt gcagatatgg tggatttact acaccaataa catgtcatgt aagatggcga
     1381 gggttacctt cattgtcttt aatatttagg gctgctggtg ttaaatgtga tacatgtttg
     1441 gagctcttct ttgtgttata ctagttcata ttcgtgacca tttatagcac atcggggata
     1501 tgcaacttat tgtttttgtt gttgaatcac tcgaagaaaa acaagaatgg ctacatcatg
     1561 gaggtaattt aagtgttgct tatttaccat ttttatccac tttgtgcgtc ttgcttgaga
     1621 tttttaattt ggcagctaac acctaaaaca ttagctgatg tgataggtgg tacactaaat
     1681 ccagtggtgt gaaagttcag atgtgtaact attatcacaa tataatatgt tacatctaac
     1741 taagaaatcc tcctattaca tagaaatgga tgtgaaagtt catatgtgta tctagccatt
     1801 ttatagagat ggaggggttc aattgccgat ggagatgtcc aatccttgta aataataacg
     1861 ggaattgacg ataaagttca tatcagatgt caatggtacc gggtaagtcc actacgtaga
     1921 gtattatatt tattgccttt tctgcttaat ctgatgtttt agattgcggc aactattttt
     1981 tattatgtag cacttgggat gaatgtgtac tgacaaagga tacaatacat actctaacag
     2041 ttgaaagtgc ttcaggttat actataatcg ttaaagtaac gaaattacat agtactgggt
     2101 atgactgcta cttctgcagc ctaaaggtaa tatgtatcag attttgatat ggggaaataa
     2161 ttgtgtaaaa aaagtgtaga ttggcaggga caccttaacc ctgtgttgcc tttggcaacc
     2221 caccaagcca accccgtaat agccggatgc ctgtaaatca cctccaccga ataccccatg
     2281 agtggcaagc acgagcctaa cccgaaggca tactccgagg gaattgctcc ccccgggact
     2341 cgaacctgcg ccattttgtg taaagcttcc aaacatgggg ccccagcttc aaagggacgg
     2401 gtaccgttga agcactgctt ctttggtata tggggaaata attatcctat gcttatactc
     2461 cttgtgaaat tcataagtgg taaaggttca tcaccaatgt cgtaactact ctaaaaatac
     2521 catatgtcga taattgtatg ctatatttat tagtatagtg tttcacaaat acacaactca
     2581 aatatgggtt catttgaatc tactaactgc tggaatacga gtctatgttt gtaaacatag
     2641 tatctacaac catagaaact tatttttttt gttggcataa tattaaacca aagcaccctc
     2701 ttaattttat gtttcatcat gatccattaa tagttatgtc agttttttgt tattctgtga
     2761 tcaacacgga gtaatttaat tttttaatat atacatgggt ttcaaatctg taagtttaat
     2821 attttgtttg tcgttaaggg ttcaatttca tattttgtc
//
LOCUS       XR_011757398             874 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841175), ncRNA.
ACCESSION   XR_011757398
VERSION     XR_011757398.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..874
                     /gene="LOC139841175"
                     /note="uncharacterized LOC139841175; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841175"
     ncRNA           1..874
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841175"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139841175"
ORIGIN      
        1 gttccattcc atcgactaaa aataatcccc aagaacccta gctatatcga tcaatttcaa
       61 agaagctata ttatataaat tcataataca gtaccttcaa tacactttcg tcaatttgtt
      121 caaacgacat aaaccctaat tttttgatta ttatgcttga tatttgtgtc aatcggtatt
      181 tacgtttcca attcgtcttc aactcagaac gtgttcaatc gacaaggttg cagacaatca
      241 ttttatccaa taatgattag ctccctcgca ttcaatttcg ttcaatcgaa acaattcgtt
      301 aaccattatg gattctcaat acgttgattt atggatattg tcctatgtca tcagaaggtg
      361 gactgttgca tacaagcata aaaagcagat tcatagtaaa gttgtcatta agaaaacagt
      421 tttgcacaac aaaatatcat tcaaaaaatg gatgacgctt gagaattcat acctctaaac
      481 ctgctcaaca atcaagtcac acctgaaact caagtgcgtg ttaaggtgtt tgttacttgg
      541 aaaaagacat acttcaaaat ccactttcag atatatgtgc acaaaccagg tgattataaa
      601 tagtaattat tcatcaaatt cttataattt cttgtaattt gaccaagtga aaatttcaac
      661 gattgaatat aaatagtaaa cttcttatta ggaatttgtt cataatattt ttttatcgat
      721 tgcaaacaaa tggtaaactc ctttttgaaa tcaacatagt taaaagtgag gtttgtgtag
      781 gtcttgatct tggatagaag attgaactac tggtcgataa aactgacaac ctttgttatc
      841 gggtttgcct aatcgtcttt tcatttatgt gtta
//
LOCUS       XM_071831405            2467 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841177), transcript variant X1, mRNA.
ACCESSION   XM_071831405
VERSION     XM_071831405.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2467
                     /gene="LOC139841177"
                     /note="uncharacterized LOC139841177; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841177"
     CDS             222..2105
                     /gene="LOC139841177"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071687506.1"
                     /db_xref="GeneID:139841177"
                     /translation="MPLAKLLGASTQDTMKVDEGNDSLDTFIRQAVGKEPLFSLSRTS
                     DNPVQWIQFLHQLDQQDIPGWPLLAPKVQMHKCDKCAREFCSPMNYRRHTRVHRRSLK
                     FHKDPQNYRDLLGAFWDKLSYDETKELMSFKDVKLEEVPGSSIVMNITANLRKSAFLS
                     LPQVYVKAGSALVDIIQDRPTRLPITSQELFSILDDASEGTFLCAGTAESLQKYVFDG
                     EAGKIGLEMKNLIACTSFLVEQKLVKACLVDKDAEALRCQKLLFEEEEAAQKRQAELL
                     ERKRQRKLRQKEQRIRDQLKVDAYPASTEASSPQSSIEVDSSTPDENLSLPVEPTKLS
                     NSENNIDIEAQGGSTSDHSDYAIRQKPEYQMVHKNGFKHYVARWQPSNSVKSRRNNYH
                     VDHSLKRVHAHKQREQRGVGGSKVWTKKPKSENGGGGIERLRVHNDAINQTDQNNGQL
                     MIGSISVTLRNSLGEPHKVNSLVVIQENGDTCQLAETTSREVLATMSNHDSCELNVND
                     ENANNSCSQMEDKEKQERVPISVHDAKAFLAQRWKEAASGEHVMLLLSSCEPPIRPDA
                     HNNHYPSERVILGNAENRLVNTGVVISHTHGNGNGNVKPQFRTKPEKGMKIKYIPKQR
                     PTN"
     misc_feature    444..512
                     /gene="LOC139841177"
                     /note="Zinc finger, C2H2 type; Region: zf-C2H2; pfam00096"
                     /db_xref="CDD:395048"
ORIGIN      
        1 catcaatcat caccagctac atacatatac acataaatat tacatatata catatataca
       61 tacacaataa cataaaacat ttgtcaatta ttttcttttg ttttccaaca tacttattgc
      121 cgcctgttcg gcgccggaaa atatctacga tctcgagcga tctcaactcc accacacaca
      181 cactggtttt ttagtggaaa acattgaaga ttttagtata gatgcctcta gcaaaacttt
      241 taggtgccag tactcaagac acaatgaaag tagacgaagg aaatgattcg ttggatactt
      301 ttattcgaca agcagttggt aaggaaccct tgttttcgct ctcaagaaca agtgacaatc
      361 ctgtgcagtg gatacagttt cttcatcagc tggatcaaca agatatccca ggttggcccc
      421 tgcttgctcc gaaagttcag atgcataaat gcgataagtg tgctcgtgag ttctgttcgc
      481 ctatgaacta tcggagacat acacgggtgc atcgccgatc tctgaaattt cataaggatc
      541 ctcaaaatta tcgtgattta ctaggtgcat tttgggataa gctctcatat gatgaaacta
      601 aggaattaat gtcttttaag gatgttaaac tggaggaagt tccaggctca tccatagtta
      661 tgaatattac agcaaatctc aggaaatcag cttttctatc tcttccacaa gtttatgtga
      721 aggccggttc ggctcttgtg gatattatcc aagatagacc tacaaggctt ccaattactt
      781 cccaggaatt gtttagcata ctagatgatg ccagtgaggg aacgtttcta tgtgctggaa
      841 ctgctgaatc attgcaaaaa tatgtttttg atggggaagc cgggaagatc ggtcttgaga
      901 tgaaaaactt aattgcttgt accagctttc ttgttgaaca gaaattggta aaggcatgcc
      961 ttgtagacaa agatgctgaa gcattaagat gccagaagtt gcttttcgaa gaggaggaag
     1021 ctgctcagaa aaggcaagct gagttgttgg aaagaaaaag acaacgaaag cttcggcaaa
     1081 aggaacaaag aatacgggac cagctaaagg tagatgctta tcccgcttca accgaagctt
     1141 cgagtcctca gtcatctatc gaggttgatt cttctacacc ggacgaaaat ttatccctgc
     1201 ctgtggagcc cactaaacta tcaaacagtg agaacaacat tgatattgaa gctcaaggtg
     1261 ggtccaccag tgatcattca gattacgcta ttagacagaa acccgagtac caaatggttc
     1321 ataagaatgg ttttaagcat tatgtggctc gatggcagcc gtcaaattca gtaaaaagta
     1381 gacgaaacaa ttatcatgtg gatcatagtc tgaaacgggt acatgcacac aagcagaggg
     1441 aacaaagggg ggttggtggt agtaaagtat ggaccaaaaa acctaaatct gaaaacggtg
     1501 gtggtggaat tgaaaggttg agagtacata acgatgcgat taatcaaacg gatcagaaca
     1561 atggtcagtt gatgattggt tccatatctg tgacgttgcg aaacagttta ggtgagccac
     1621 ataaggtcaa tagtctcgtt gtaattcaag aaaatggtga cacgtgtcag ctggctgaga
     1681 ccaccagtag ggaagtattg gctaccatga gcaatcatga ttcgtgcgag ttgaatgtaa
     1741 atgacgagaa tgcaaataat tcttgttcac aaatggaaga taaggagaag caagagcgag
     1801 ttccaatttc tgttcatgat gcaaaagcgt tcctcgcaca aagatggaaa gaggcagcct
     1861 cgggggaaca tgtaatgttg cttctatctt catgcgaacc gcctattcgg cctgatgcac
     1921 ataacaatca ttatccatcg gagcgtgtca ttcttggtaa cgcagagaat cgattggtaa
     1981 acacaggtgt ggtcatatcg catacacatg gaaatggaaa tggaaatgtt aaacctcaat
     2041 ttagaacgaa acctgagaaa ggaatgaaga taaagtatat tccgaaacaa agacccacta
     2101 attaggaggt aagaaagcaa aacgcaaaac gaacaagatc ccatcttttt gccaagtggt
     2161 tcgagtttga gtctcttcaa atacagagta tgagttggtt gatagtattt tttatccaaa
     2221 aactgaaaaa tacctcgcga tgtgcagttt tattcatagc aagggattcc agtttactgg
     2281 tgggtatcag agaaacaatt ttatttttat ttttttgggg tcaagagcca tggatttttc
     2341 tcacaatttg tggtttagag gggaggcatt agtttgaaat actattgaat tagattagac
     2401 tttatttatt tatttattta tttttggtgt ttatgtgcgt ttaattcatt gtttgctaga
     2461 aaaaaaa
//
LOCUS       XM_071831406            1943 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841177), transcript variant X2, mRNA.
ACCESSION   XM_071831406
VERSION     XM_071831406.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1943
                     /gene="LOC139841177"
                     /note="uncharacterized LOC139841177; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841177"
     CDS             64..1581
                     /gene="LOC139841177"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071687507.1"
                     /db_xref="GeneID:139841177"
                     /translation="MSSRSSWSNSRKSRKAEVPGSSIVMNITANLRKSAFLSLPQVYV
                     KAGSALVDIIQDRPTRLPITSQELFSILDDASEGTFLCAGTAESLQKYVFDGEAGKIG
                     LEMKNLIACTSFLVEQKLVKACLVDKDAEALRCQKLLFEEEEAAQKRQAELLERKRQR
                     KLRQKEQRIRDQLKVDAYPASTEASSPQSSIEVDSSTPDENLSLPVEPTKLSNSENNI
                     DIEAQGGSTSDHSDYAIRQKPEYQMVHKNGFKHYVARWQPSNSVKSRRNNYHVDHSLK
                     RVHAHKQREQRGVGGSKVWTKKPKSENGGGGIERLRVHNDAINQTDQNNGQLMIGSIS
                     VTLRNSLGEPHKVNSLVVIQENGDTCQLAETTSREVLATMSNHDSCELNVNDENANNS
                     CSQMEDKEKQERVPISVHDAKAFLAQRWKEAASGEHVMLLLSSCEPPIRPDAHNNHYP
                     SERVILGNAENRLVNTGVVISHTHGNGNGNVKPQFRTKPEKGMKIKYIPKQRPTN"
ORIGIN      
        1 tttatcgttg gaagttttag agtgtcaatg tttcatactt taaaacatac ctgaaaatga
       61 aacatgtcaa gtagatcaag ctggtcaaat tcgaggaagt cacgcaaagc ggaagttcca
      121 ggctcatcca tagttatgaa tattacagca aatctcagga aatcagcttt tctatctctt
      181 ccacaagttt atgtgaaggc cggttcggct cttgtggata ttatccaaga tagacctaca
      241 aggcttccaa ttacttccca ggaattgttt agcatactag atgatgccag tgagggaacg
      301 tttctatgtg ctggaactgc tgaatcattg caaaaatatg tttttgatgg ggaagccggg
      361 aagatcggtc ttgagatgaa aaacttaatt gcttgtacca gctttcttgt tgaacagaaa
      421 ttggtaaagg catgccttgt agacaaagat gctgaagcat taagatgcca gaagttgctt
      481 ttcgaagagg aggaagctgc tcagaaaagg caagctgagt tgttggaaag aaaaagacaa
      541 cgaaagcttc ggcaaaagga acaaagaata cgggaccagc taaaggtaga tgcttatccc
      601 gcttcaaccg aagcttcgag tcctcagtca tctatcgagg ttgattcttc tacaccggac
      661 gaaaatttat ccctgcctgt ggagcccact aaactatcaa acagtgagaa caacattgat
      721 attgaagctc aaggtgggtc caccagtgat cattcagatt acgctattag acagaaaccc
      781 gagtaccaaa tggttcataa gaatggtttt aagcattatg tggctcgatg gcagccgtca
      841 aattcagtaa aaagtagacg aaacaattat catgtggatc atagtctgaa acgggtacat
      901 gcacacaagc agagggaaca aaggggggtt ggtggtagta aagtatggac caaaaaacct
      961 aaatctgaaa acggtggtgg tggaattgaa aggttgagag tacataacga tgcgattaat
     1021 caaacggatc agaacaatgg tcagttgatg attggttcca tatctgtgac gttgcgaaac
     1081 agtttaggtg agccacataa ggtcaatagt ctcgttgtaa ttcaagaaaa tggtgacacg
     1141 tgtcagctgg ctgagaccac cagtagggaa gtattggcta ccatgagcaa tcatgattcg
     1201 tgcgagttga atgtaaatga cgagaatgca aataattctt gttcacaaat ggaagataag
     1261 gagaagcaag agcgagttcc aatttctgtt catgatgcaa aagcgttcct cgcacaaaga
     1321 tggaaagagg cagcctcggg ggaacatgta atgttgcttc tatcttcatg cgaaccgcct
     1381 attcggcctg atgcacataa caatcattat ccatcggagc gtgtcattct tggtaacgca
     1441 gagaatcgat tggtaaacac aggtgtggtc atatcgcata cacatggaaa tggaaatgga
     1501 aatgttaaac ctcaatttag aacgaaacct gagaaaggaa tgaagataaa gtatattccg
     1561 aaacaaagac ccactaatta ggaggtaaga aagcaaaacg caaaacgaac aagatcccat
     1621 ctttttgcca agtggttcga gtttgagtct cttcaaatac agagtatgag ttggttgata
     1681 gtatttttta tccaaaaact gaaaaatacc tcgcgatgtg cagttttatt catagcaagg
     1741 gattccagtt tactggtggg tatcagagaa acaattttat ttttattttt ttggggtcaa
     1801 gagccatgga tttttctcac aatttgtggt ttagagggga ggcattagtt tgaaatacta
     1861 ttgaattaga ttagacttta tttatttatt tatttatttt tggtgtttat gtgcgtttaa
     1921 ttcattgttt gctagaaaaa aaa
//
LOCUS       XM_071831407             618 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841178), mRNA.
ACCESSION   XM_071831407
VERSION     XM_071831407.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..618
                     /gene="LOC139841178"
                     /note="uncharacterized LOC139841178; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841178"
     CDS             1..618
                     /gene="LOC139841178"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687508.1"
                     /db_xref="GeneID:139841178"
                     /translation="MSPSCNCTVDGLHFTRGYYLTDRIYPEWSTLVKSFKNTNDPKAK
                     KFKRFQESARKDIERAFGILQGRFSIIKNPARQFYISKIQIIMYTCVLLHNMITEDNG
                     RAFCGLGEYYPPTRRPRHLDFHERVELHMRMDKELRDKGNHHFLRDNLIEHIWNLPLN
                     HRIRYDPSSGPSNIPEHVTNQPLDEEEADEEDENDEVEEEYGDED"
     misc_feature    <4..306
                     /gene="LOC139841178"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcacctt catgtaactg tactgttgat ggattgcatt ttactagagg ttattatttg
       61 acagatagga tttatccgga atggtcaact cttgttaaat cattcaaaaa taccaatgat
      121 ccaaaagcaa agaaatttaa aagattccaa gagtctgcaa gaaaagatat tgaacgagct
      181 tttggtatac ttcaaggtcg attctcaatt attaaaaatc cagcacggca attctacata
      241 agcaaaattc aaataattat gtatacttgt gtgttgttac ataatatgat aaccgaagac
      301 aatggtcgtg cattttgtgg tctcggagaa tattatcctc caacgcgtcg tcctcgacat
      361 ttagacttcc atgaacgggt tgaactacat atgcgaatgg ataaagaact aagggataaa
      421 ggcaatcatc attttcttcg agataatctt attgaacaca tttggaatct tccactaaac
      481 caccgtattc gctatgatcc aagttcggga ccttcaaaca ttcctgaaca tgtgactaac
      541 caaccattag atgaggaaga agccgatgaa gaagatgaaa atgatgaggt cgaagaagag
      601 tatggagatg aagactag
//
LOCUS       XM_071831408             624 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841179), mRNA.
ACCESSION   XM_071831408
VERSION     XM_071831408.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..624
                     /gene="LOC139841179"
                     /note="uncharacterized LOC139841179; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841179"
     CDS             1..624
                     /gene="LOC139841179"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687509.1"
                     /db_xref="GeneID:139841179"
                     /translation="MDRNNENYEEALALASAYNPMQVLDVIDFLEEEDEAEGEVVSIP
                     RAPKRHFPRDREGKARQLFNDYFSDNPTFPLDRRDATGLYGFNIFQNCTSAIRQLAYG
                     VAPDAFDEYLHMGESTYYLCLENFCKSVLHLYSVEYMRRPNGHNVQRLISKHEDIHGL
                     PGMLGSIDCMHWGWKNCPFGWKGQFTRGDHGYPKIMLEAVASYDTWI"
     misc_feature    409..>621
                     /gene="LOC139841179"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggatcgaa ataacgaaaa ttatgaagag gcgttagcac ttgcaagtgc atataatcca
       61 atgcaagtac tcgatgtaat tgatttttta gaagaagaag atgaagccga aggtgaagtt
      121 gtatcgatac ctagagctcc taaaagacac tttcctagag atcgagaagg aaaagctaga
      181 caactattca acgattattt ttccgacaac cctactttcc cgctcgatag acgagatgca
      241 accggtttat acggttttaa cattttccaa aattgtacgt ccgctataag acaattagcg
      301 tacggtgttg cacccgatgc ttttgatgaa tacttacaca tgggtgaatc aacttattat
      361 ttatgtttgg aaaacttttg caagagtgtt ttacacttat attcagtcga gtacatgaga
      421 aggccaaatg ggcataatgt tcaacgttta atttctaaac atgaagatat acatggtctt
      481 ccgggtatgt tagggagcat cgattgtatg cattggggtt ggaaaaattg tccatttggt
      541 tggaaagggc aatttacacg aggtgatcat ggttacccaa aaatcatgtt agaggcagtt
      601 gcctcgtatg atacatggat ttga
//
LOCUS       XM_071831409            1672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-rich interactive
            domain-containing protein 1-like (LOC139841182), transcript variant
            X1, mRNA.
ACCESSION   XM_071831409
VERSION     XM_071831409.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1672
                     /gene="LOC139841182"
                     /note="AT-rich interactive domain-containing protein
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139841182"
     CDS             276..965
                     /gene="LOC139841182"
                     /codon_start=1
                     /product="AT-rich interactive domain-containing protein
                     1-like"
                     /protein_id="XP_071687510.1"
                     /db_xref="GeneID:139841182"
                     /translation="MDRFNYINDDNLKLAIPIGPRFQADVPEWRGPPQKSYPKVAFTE
                     TDSSKWLGTVIWSMKDPTQESETGVIGKGRSDTCDCAAPGSILCVKRHIVNKSAHLQL
                     YLGPAFQIWKFDQMGEAVAKLWKQQEQHRLTNIMIKNPFSEGKDFITTALKCFPTKSK
                     KEIISYYFNVYVPRRMSIQTRSGCRAIDTDDEEEKLKSSLKRPRKRARSDGTKVHSSK
                     IVGSKYLIGRR"
     misc_feature    321..>446
                     /gene="LOC139841182"
                     /note="ELM2 domain; Region: ELM2; pfam01448"
                     /db_xref="CDD:460214"
ORIGIN      
        1 agcaagcagc cgtcattcag atcttcatca tcatattgcc aaattattct ttctatatgt
       61 tactacgtat ataatagatc cacggataca gaattataac cagagatcaa agataccaat
      121 tattggctgg acggagttct tttgggattt agttatttaa accttttatc tcaaaatacc
      181 gacgaagaat cattcacacc accttgcttc agtttgtgac actatcgtaa ggtgttacaa
      241 aaaatttcaa cttattcacc ataaagtcag cttcaatgga ccggtttaac tacatcaatg
      301 atgataattt aaaattagca atcccgatcg gaccacgttt ccaagctgat gtaccggagt
      361 ggcggggccc tcctcaaaaa agttatccca aagttgcatt tactgaaaca gattcttcaa
      421 aatggttggg tactgtgata tggtcgatga aagacccgac ccaagaaagt gaaacgggtg
      481 tcataggaaa agggagatct gatacttgcg attgcgccgc tcctggatct atcttatgtg
      541 tcaagcggca catcgttaat aaatcagcac acctgcagtt atacttggga cccgctttcc
      601 agatttggaa gtttgaccaa atgggagaag cggttgccaa gttatggaag cagcaagaac
      661 agcataggct gacaaacatt atgataaaaa atccattttc ggaaggcaaa gatttcatta
      721 caacggctct aaaatgtttc cctacaaagt caaagaagga gataatcagc tattacttca
      781 acgtatatgt tcctagacga atgagtatac aaacaagatc agggtgtagg gctatagata
      841 cggatgatga agaagagaag ttaaagagtt ctttgaaacg acctagaaaa agggctcggt
      901 ctgatggtac gaaggtgcat agttctaaaa ttgtcggttc caagtacttg atcggaagaa
      961 gatgactaca tccgtttggt gagatcggtt acatggagtg caactcggat cttgctgcac
     1021 acttgtttaa agctcctttg atggtaacgt tttcttctta tctacccttt taaaactctt
     1081 tatctctctc taggatcata taataggcga catcaacgtt agctttgaat ttgatggagt
     1141 tatgcctaat actttctttt gcttttccta tatccatcat ggaattgttt tttgtttttt
     1201 gtttttattt ttttattttc aaaaaacaaa aatatataaa aaaggatcgc ttcatcatgg
     1261 ggtcttatac atggttttgg ggttacaaat acttcttcac ttgctcataa agttgagcaa
     1321 ccttaaacta ttttggtggg gtatggctag ggttatgcat ggtacaggac tgaaccaaac
     1381 taactcggtt cagtttcgta ccgagtctca aattatagga gaaagtcgta ccgaggacta
     1441 gaccatataa tatcggttcg gtcaagttcc ataagtatcg gttcgggtcc gtggaatgaa
     1501 ccgtcccaat ttattgttcg atggttaatt acagttgttg caaaatataa agtttcgatt
     1561 tcaaaatgta gaatttgacc acaacatata gattattgtg atgttttggc actatgtatg
     1621 tgtgcagggg cgtttttatt tgggggcaag ggggcacccg cgcccagtgg at
//
LOCUS       XM_071831410            2010 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-rich interactive
            domain-containing protein 1-like (LOC139841182), transcript variant
            X2, mRNA.
ACCESSION   XM_071831410
VERSION     XM_071831410.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2010
                     /gene="LOC139841182"
                     /note="AT-rich interactive domain-containing protein
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139841182"
     CDS             614..1303
                     /gene="LOC139841182"
                     /codon_start=1
                     /product="AT-rich interactive domain-containing protein
                     1-like"
                     /protein_id="XP_071687511.1"
                     /db_xref="GeneID:139841182"
                     /translation="MDRFNYINDDNLKLAIPIGPRFQADVPEWRGPPQKSYPKVAFTE
                     TDSSKWLGTVIWSMKDPTQESETGVIGKGRSDTCDCAAPGSILCVKRHIVNKSAHLQL
                     YLGPAFQIWKFDQMGEAVAKLWKQQEQHRLTNIMIKNPFSEGKDFITTALKCFPTKSK
                     KEIISYYFNVYVPRRMSIQTRSGCRAIDTDDEEEKLKSSLKRPRKRARSDGTKVHSSK
                     IVGSKYLIGRR"
     misc_feature    659..>784
                     /gene="LOC139841182"
                     /note="ELM2 domain; Region: ELM2; pfam01448"
                     /db_xref="CDD:460214"
ORIGIN      
        1 agcaagcagc cgtcattcag atcttcatca tcatattgcc aaattattct ttctatatgt
       61 tactacgtat ataatagatc cacggataca gaattataac cagagatcaa agataccaat
      121 tattggctgg acggagttct tttgggattt agttatttaa accttttatc tcaagataat
      181 gacgtggcgt caatgtgtgg cttctacatg gcgatgatgt ggctgccact cgtaccgcct
      241 ctaaagtcga gagggaaaca acccagattg tacgttatta actttcaaga gtgtctcttg
      301 tccggctcga tatgagcaag gtaggctcaa ttttacacat tttcaaacac gttatcgttc
      361 gggccctaga tcattcgggc catttgccct ataaacattg tcacattggc taatagtttc
      421 tcctccttga caaaaacatc acttcttttt ctcttgtctt cactatcctt caatttgtca
      481 ccagatcact caataaattc aatatatttc agaataccga cgaagaatca ttcacaccac
      541 cttgcttcag tttgtgacac tatcgtaagg tgttacaaaa aatttcaact tattcaccat
      601 aaagtcagct tcaatggacc ggtttaacta catcaatgat gataatttaa aattagcaat
      661 cccgatcgga ccacgtttcc aagctgatgt accggagtgg cggggccctc ctcaaaaaag
      721 ttatcccaaa gttgcattta ctgaaacaga ttcttcaaaa tggttgggta ctgtgatatg
      781 gtcgatgaaa gacccgaccc aagaaagtga aacgggtgtc ataggaaaag ggagatctga
      841 tacttgcgat tgcgccgctc ctggatctat cttatgtgtc aagcggcaca tcgttaataa
      901 atcagcacac ctgcagttat acttgggacc cgctttccag atttggaagt ttgaccaaat
      961 gggagaagcg gttgccaagt tatggaagca gcaagaacag cataggctga caaacattat
     1021 gataaaaaat ccattttcgg aaggcaaaga tttcattaca acggctctaa aatgtttccc
     1081 tacaaagtca aagaaggaga taatcagcta ttacttcaac gtatatgttc ctagacgaat
     1141 gagtatacaa acaagatcag ggtgtagggc tatagatacg gatgatgaag aagagaagtt
     1201 aaagagttct ttgaaacgac ctagaaaaag ggctcggtct gatggtacga aggtgcatag
     1261 ttctaaaatt gtcggttcca agtacttgat cggaagaaga tgactacatc cgtttggtga
     1321 gatcggttac atggagtgca actcggatct tgctgcacac ttgtttaaag ctcctttgat
     1381 ggtaacgttt tcttcttatc taccctttta aaactcttta tctctctcta ggatcatata
     1441 ataggcgaca tcaacgttag ctttgaattt gatggagtta tgcctaatac tttcttttgc
     1501 ttttcctata tccatcatgg aattgttttt tgttttttgt ttttattttt ttattttcaa
     1561 aaaacaaaaa tatataaaaa aggatcgctt catcatgggg tcttatacat ggttttgggg
     1621 ttacaaatac ttcttcactt gctcataaag ttgagcaacc ttaaactatt ttggtggggt
     1681 atggctaggg ttatgcatgg tacaggactg aaccaaacta actcggttca gtttcgtacc
     1741 gagtctcaaa ttataggaga aagtcgtacc gaggactaga ccatataata tcggttcggt
     1801 caagttccat aagtatcggt tcgggtccgt ggaatgaacc gtcccaattt attgttcgat
     1861 ggttaattac agttgttgca aaatataaag tttcgatttc aaaatgtaga atttgaccac
     1921 aacatataga ttattgtgat gttttggcac tatgtatgtg tgcaggggcg tttttatttg
     1981 ggggcaaggg ggcacccgcg cccagtggat
//
LOCUS       XM_071831411            1818 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-rich interactive
            domain-containing protein 1-like (LOC139841182), transcript variant
            X3, mRNA.
ACCESSION   XM_071831411
VERSION     XM_071831411.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1818
                     /gene="LOC139841182"
                     /note="AT-rich interactive domain-containing protein
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139841182"
     CDS             422..1111
                     /gene="LOC139841182"
                     /codon_start=1
                     /product="AT-rich interactive domain-containing protein
                     1-like"
                     /protein_id="XP_071687512.1"
                     /db_xref="GeneID:139841182"
                     /translation="MDRFNYINDDNLKLAIPIGPRFQADVPEWRGPPQKSYPKVAFTE
                     TDSSKWLGTVIWSMKDPTQESETGVIGKGRSDTCDCAAPGSILCVKRHIVNKSAHLQL
                     YLGPAFQIWKFDQMGEAVAKLWKQQEQHRLTNIMIKNPFSEGKDFITTALKCFPTKSK
                     KEIISYYFNVYVPRRMSIQTRSGCRAIDTDDEEEKLKSSLKRPRKRARSDGTKVHSSK
                     IVGSKYLIGRR"
     misc_feature    467..>592
                     /gene="LOC139841182"
                     /note="ELM2 domain; Region: ELM2; pfam01448"
                     /db_xref="CDD:460214"
ORIGIN      
        1 agcaagcagc cgtcattcag atcttcatca tcatattgcc aaattattct ttctatatgt
       61 tactacgtat ataatagatc cacggataca gaattataac cagagatcaa agataccaat
      121 tattggctgg acggagttct tttgggattt agttatttaa accttttatc tcaagataat
      181 gacgtggcgt caatgtgtgg cttctacatg gcgatgatgt ggctgccact cgtaccgcct
      241 ctaaagtcga gagggaaaca acccagattg tacgttatta actttcaaga gtgtctcttg
      301 tccggctcga tatgagcaag aataccgacg aagaatcatt cacaccacct tgcttcagtt
      361 tgtgacacta tcgtaaggtg ttacaaaaaa tttcaactta ttcaccataa agtcagcttc
      421 aatggaccgg tttaactaca tcaatgatga taatttaaaa ttagcaatcc cgatcggacc
      481 acgtttccaa gctgatgtac cggagtggcg gggccctcct caaaaaagtt atcccaaagt
      541 tgcatttact gaaacagatt cttcaaaatg gttgggtact gtgatatggt cgatgaaaga
      601 cccgacccaa gaaagtgaaa cgggtgtcat aggaaaaggg agatctgata cttgcgattg
      661 cgccgctcct ggatctatct tatgtgtcaa gcggcacatc gttaataaat cagcacacct
      721 gcagttatac ttgggacccg ctttccagat ttggaagttt gaccaaatgg gagaagcggt
      781 tgccaagtta tggaagcagc aagaacagca taggctgaca aacattatga taaaaaatcc
      841 attttcggaa ggcaaagatt tcattacaac ggctctaaaa tgtttcccta caaagtcaaa
      901 gaaggagata atcagctatt acttcaacgt atatgttcct agacgaatga gtatacaaac
      961 aagatcaggg tgtagggcta tagatacgga tgatgaagaa gagaagttaa agagttcttt
     1021 gaaacgacct agaaaaaggg ctcggtctga tggtacgaag gtgcatagtt ctaaaattgt
     1081 cggttccaag tacttgatcg gaagaagatg actacatccg tttggtgaga tcggttacat
     1141 ggagtgcaac tcggatcttg ctgcacactt gtttaaagct cctttgatgg taacgttttc
     1201 ttcttatcta cccttttaaa actctttatc tctctctagg atcatataat aggcgacatc
     1261 aacgttagct ttgaatttga tggagttatg cctaatactt tcttttgctt ttcctatatc
     1321 catcatggaa ttgttttttg ttttttgttt ttattttttt attttcaaaa aacaaaaata
     1381 tataaaaaag gatcgcttca tcatggggtc ttatacatgg ttttggggtt acaaatactt
     1441 cttcacttgc tcataaagtt gagcaacctt aaactatttt ggtggggtat ggctagggtt
     1501 atgcatggta caggactgaa ccaaactaac tcggttcagt ttcgtaccga gtctcaaatt
     1561 ataggagaaa gtcgtaccga ggactagacc atataatatc ggttcggtca agttccataa
     1621 gtatcggttc gggtccgtgg aatgaaccgt cccaatttat tgttcgatgg ttaattacag
     1681 ttgttgcaaa atataaagtt tcgatttcaa aatgtagaat ttgaccacaa catatagatt
     1741 attgtgatgt tttggcacta tgtatgtgtg caggggcgtt tttatttggg ggcaaggggg
     1801 cacccgcgcc cagtggat
//
LOCUS       XR_011757399            1125 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-rich interactive
            domain-containing protein 1-like (LOC139841182), transcript variant
            X4, misc_RNA.
ACCESSION   XR_011757399
VERSION     XR_011757399.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1125
                     /gene="LOC139841182"
                     /note="AT-rich interactive domain-containing protein
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139841182"
     misc_RNA        1..1125
                     /gene="LOC139841182"
                     /product="AT-rich interactive domain-containing protein
                     1-like, transcript variant X4"
                     /db_xref="GeneID:139841182"
ORIGIN      
        1 agcaagcagc cgtcattcag atcttcatca tcatattgcc aaattattct ttctatatgt
       61 tactacgtat ataatagatc cacggataca gaattataac cagagatcaa agataccaat
      121 tattggctgg acggagttct tttgggattt agttatttaa accttttatc tcaaaatacc
      181 gacgaagaat cattcacacc accttgcttc agtttgtgac actatcgtaa ggtgttacaa
      241 aaaatttcaa cttattcacc ataaagtcag cttcaatgga ccggtttaac tacatcaatg
      301 atgataattt aaaattagca atcccgatcg gaccacgttt ccaagctgat gtaccggagt
      361 ggcggggccc tcctcaaaaa agttatccca aagttgcatt tactgaaaca gattcttcaa
      421 aatggttggg tactgtgata tggtcgatga aagacccgac ccaagaaagt gaaacgggtg
      481 tcataggaaa agggagatct gatacttgcg attgcgccgc tcctggatct atcttatgtg
      541 tcaagcggca catcgttaat aaatcagcac acctgcagtt atacttggga cccgctttcc
      601 agatttggaa gtttgaccaa atgggagaag cggttgccaa gttatggaag cagcaagaac
      661 agcataggct gacaaacatt atgataaaaa atccattttc ggaaggcaaa gatttcatta
      721 caacggctct aaaatgtttc cctacaaagt caaagaagga gataatcagc tattacttca
      781 acgtatatgt tcctagacga atgagtatac aaacaagatc agggtgtagg gctatagata
      841 cggatgatga agaagagaag ttaaagagtt ctttgaaacg acctagaaaa agggctcggt
      901 ctgatggtac gaaggtgcat agttctaaaa ttgtcggttc caagtacttg atcggaagaa
      961 gatgactaca tccgtttggt gagatcggtt acatggagtg caactcggat cttgctgcac
     1021 acttgtttaa agctcctttg atggttgtta gcttatcttg taggatgttt tgggagaaga
     1081 cggcatgttg atgttatgtt tgtcatgaag tcaactctga tatga
//
LOCUS       XM_071831413            1159 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-rich interactive
            domain-containing protein 1-like (LOC139841183), transcript variant
            X1, mRNA.
ACCESSION   XM_071831413
VERSION     XM_071831413.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1159
                     /gene="LOC139841183"
                     /note="AT-rich interactive domain-containing protein
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139841183"
     CDS             242..913
                     /gene="LOC139841183"
                     /codon_start=1
                     /product="AT-rich interactive domain-containing protein
                     1-like"
                     /protein_id="XP_071687514.1"
                     /db_xref="GeneID:139841183"
                     /translation="MKSATMDWFNYINDDNSKLAIPIGPRFQADVPEWRGPPRALTET
                     DSSKWVDTVIWSMKDSTLESVKGGIGKGRPDTCDCATPGSILCVKRHIDNKSADLRIY
                     LGPAFQIWKFDQMGEAVAKSWKQQEQQRLTNIMIKNPFSEGKDFITTALKCFPTKSKK
                     EIISYYFNVYVPRRMSIQTRSGCRAVDTDDEEVKLKSSLKRPRKRVRSDGTTVHSSKY
                     LIGRR"
     misc_feature    302..430
                     /gene="LOC139841183"
                     /note="ELM2 domain; Region: ELM2; pfam01448"
                     /db_xref="CDD:460214"
ORIGIN      
        1 cgtcaccggc aagaagccag catccagatc ttcatcatat ctttgccaaa atattctttt
       61 tatatgtttt ataataacct atgatcaaag aagaccaatt ataggttgga gagagttcta
      121 ttggggattc actgatttaa acctttcatc tcaaaatact gacgaagaat cattcacgat
      181 accttgcttc cgtttgtaaa acactgtcat aaggtgttac aaatttctga aggtattcac
      241 catgaagtca gctacaatgg actggtttaa ctacattaat gatgataatt caaaattagc
      301 aatcccaatt ggaccacgtt ttcaagctga tgtaccggag tggcggggcc cacctcgtgc
      361 acttactgaa acagattctt caaaatgggt ggatactgtg atatggtcaa tgaaagactc
      421 gaccctagaa agtgtgaagg gtggcatagg aaaagggaga cctgatacgt gcgattgcgc
      481 cactcccgga tccatcctat gtgtcaagcg gcacatcgat aataaatcag cagatctgcg
      541 gatatacttg ggacccgctt tccagatttg gaagtttgac caaatgggag aagcggttgc
      601 caagtcatgg aagcagcaag agcagcagag gctgacaaac attatgataa aaaatccgtt
      661 ttcggaaggc aaagatttca ttacaactgc tctaaaatgt ttccctacaa agtcaaagaa
      721 ggagataatc agctattact tcaacgtata tgttcctaga cgaatgagta tacaaacaag
      781 atcagggtgt agggctgtag atacggatga tgaagaagtg aagttaaaaa gttctttgaa
      841 acgacctaga aagagggttc ggtccgatgg tacaaccgtg catagttcta agtacttgat
      901 cggaagaaga tgactacatc cgtttggtga gatcggttac atggaatgca acccggattt
      961 tgctgcacac ttgtttaagg ctcctttgat ggtaacgttt tcttcttatc tacccctttt
     1021 taaaactcta aatatctctc tagaatcata taataggttt tgcagcacac tcgtttctca
     1081 ttttactttc ttttgctttt cctatatcca tcatggaatt gttttttttt cttgaaaaac
     1141 aaaaatatat ataaaaaaa
//
LOCUS       XR_011757400            1140 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AT-rich interactive
            domain-containing protein 1-like (LOC139841183), transcript variant
            X2, misc_RNA.
ACCESSION   XR_011757400
VERSION     XR_011757400.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1140
                     /gene="LOC139841183"
                     /note="AT-rich interactive domain-containing protein
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:139841183"
     misc_RNA        1..1140
                     /gene="LOC139841183"
                     /product="AT-rich interactive domain-containing protein
                     1-like, transcript variant X2"
                     /db_xref="GeneID:139841183"
ORIGIN      
        1 cgtcaccggc aagaagccag catccagatc ttcatcatat ctttgccaaa atattctttt
       61 tatatgtttt ataataacct atgatcaaag aagaccaatt ataggttgga gagagttcta
      121 ttggggattc actgatttaa acctttcatc tcaaaatact gacgaagaat cattcacgat
      181 accttgcttc cgtttgtaaa acactgtcat aaggtgttac aaatttctga aggtattcac
      241 catgaagtca gctacaatgg actggtttaa ctacattaat gatgataatt caaaattagc
      301 aatcccaatt ggaccacgtt ttcaagctga tgtaccggag tggcggggcc cacctcgtgc
      361 acttactgaa acagattctt caaaatgggt ggatactgtg atatggtcaa tgaaagactc
      421 gaccctagaa agtgtgaagg gtggcatagg aaaagggaga cctgatacgt gcgattgcgc
      481 cactcccgga tccatcctat gtgtcaagcg gcacatcgat aataaatcag cagatctgcg
      541 gatatacttg ggacccgctt tccagatttg gaagtttgac caaatgggag aagcggttgc
      601 caagtcatgg aagcagcaag agcagcagag gctgacaaac attatgataa aaaatccgtt
      661 ttcggaaggc aaagatttca ttacaactgc tctaaaatgt ttccctacaa agtcaaagaa
      721 ggagataatc agctattact tcaacgtata tgttcctaga cgaatgagta tacaaacaag
      781 atcagggtgt agggctgtag atacggatga tgaagaagtg aagttaaaaa gttctttgaa
      841 acgacctaga aagagggttc ggtccgatgg tacaaccgtg catagttcta agtacttgat
      901 cggaagaaga tgactacatc cgtttggtga gatcggttac atggaatgca acccggattt
      961 tgctgcacac ttgtttaagg ctcctttgat ggtatgaaag aaatcttccg ctgtgcattt
     1021 gctcatatta gagatattac ttggagtcat tcatgacata tttcaaaaga cgttgcattc
     1081 gagtcgttga gttcatcaag attattatta agtcatttat agttggatag actatgaaat
//
LOCUS       XM_071831414             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841184), mRNA.
ACCESSION   XM_071831414
VERSION     XM_071831414.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139841184"
                     /note="uncharacterized LOC139841184; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841184"
     CDS             1..645
                     /gene="LOC139841184"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687515.1"
                     /db_xref="GeneID:139841184"
                     /translation="MHWVRWNQVLSSFDYGRLQVGSLPAFNRLLFIKRIWRFFNESSR
                     MWSSVVKAIHGSKAGIDGTSLSGMSTLCHIVKLYWKLKQDELLPANAMRVRAGNELNT
                     KLWSDNWLGYNCLNCKYSRLYHIEVHKDVIIFDRVYPDGWKWVWSRANIGPRNSTIKI
                     ESTDHIFLGCDMAREVWHRLMVWMDVHWVDVPYWCELVTSFDSWQSSTEIKNSC"
ORIGIN      
        1 atgcattggg ttagatggaa tcaagtgctt agttcttttg attatggacg tcttcaagtg
       61 ggaagtttac ctgcgtttaa tcgattgctt tttataaagc ggatttggag attttttaat
      121 gagtcgtcta ggatgtggtc ttcggtggtt aaagctattc acggctcaaa agcagggatc
      181 gatggtacat ctttaagtgg tatgagtaca ttgtgtcata ttgtgaaatt atattggaag
      241 cttaagcaag atgagctact gcctgcaaat gccatgcgcg tgagagcagg aaacgagttg
      301 aatactaaac tttggtcaga taattggctc gggtacaact gtttgaattg taaatatagt
      361 aggctatatc atatagaagt tcataaagat gttatcatat tcgatcgggt atatccggat
      421 ggttggaaat gggtgtggag tcgtgcaaac ataggaccac gtaattcgac tataaaaata
      481 gaatctacgg atcacatatt tttgggttgc gacatggcta gagaggtgtg gcatagactt
      541 atggtgtgga tggatgtcca ttgggtggat gttccttact ggtgtgaatt ggtcacctcg
      601 tttgattctt ggcaatcatc gaccgagatc aagaacagct gctag
//
LOCUS       XM_071831415             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cell division protein FtsZ
            homolog 2-2, chloroplastic-like (LOC139841186), mRNA.
ACCESSION   XM_071831415
VERSION     XM_071831415.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139841186"
                     /note="cell division protein FtsZ homolog 2-2,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:139841186"
     CDS             1..498
                     /gene="LOC139841186"
                     /codon_start=1
                     /product="cell division protein FtsZ homolog 2-2,
                     chloroplastic-like"
                     /protein_id="XP_071687516.1"
                     /db_xref="GeneID:139841186"
                     /translation="MTFLKLRVFLSENNRIGMEGAGMGGGTGTGAAPVIAGVAKSMGI
                     LTVGIVMTPFSFEGRRRAVQAQEGIACLRENVDMLIVIPNDKLLTAISPSTPVTEAFN
                     LADDILRQGVRGISYVITIPGLVNVDFVDIRAIMANVCSSLMGIGTATGKTRARDAAF
                     NAILI"
     misc_feature    <85..>489
                     /gene="LOC139841186"
                     /note="Cell division GTPase FtsZ [Cell cycle control, cell
                     division, chromosome partitioning]; Region: FtsZ; COG0206"
                     /db_xref="CDD:439976"
ORIGIN      
        1 atgacatttc ttaaattgcg tgttttttta tctgagaaca atagaattgg gatggaggga
       61 gctggaatgg gtggaggaac cggtacaggt gcagcacctg tgattgcagg agtagcaaag
      121 tcaatgggta tattgactgt tggaatcgtg atgaccccgt tttcatttga gggccgacgg
      181 agagcggttc aagcacaaga aggaattgcg tgtttaagag aaaacgtgga catgttgatt
      241 gttattccaa atgataagtt attgactgca atatctccgt caactcctgt aaccgaagct
      301 tttaatttag ctgatgatat tcttcgacaa ggtgttcgtg gcatctcata tgtaattacg
      361 ataccgggtt tggttaatgt ggattttgtt gatattcgag cgattatggc gaatgtatgc
      421 tcgtcattaa tggggatagg aactgcaact gggaagacga gggcaagaga tgctgcattt
      481 aacgcgattc tgatttaa
//
LOCUS       XM_071831416             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841188), mRNA.
ACCESSION   XM_071831416
VERSION     XM_071831416.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139841188"
                     /note="uncharacterized LOC139841188; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841188"
     CDS             1..636
                     /gene="LOC139841188"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687517.1"
                     /db_xref="GeneID:139841188"
                     /translation="MLDDDDDDDDDAQRIIRRRRLNRDRISTENHLFNDYFSDNPTFS
                     GDYFRKRYRMSRSLFLRIAYAITNYTAEPLPGYFKFFEQRYDCTHRLGFNNYQKCTSA
                     IRQLAYGIAPDAFDEYLHMGRQTSSDCLENCCKCIVYLISTQYLRKPTGDEVRRLHAK
                     HSEMNGFPGMLGSLDCMHWAWKNYPVVWQGHYTRTIHEGPTIFLEAVASYD"
     misc_feature    430..>633
                     /gene="LOC139841188"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgttggatg atgatgatga tgatgatgat gatgctcaga gaattattag gagacgtcgg
       61 ttgaatagag atcgaatttc taccgaaaat catttgttca acgactactt ttctgacaac
      121 ccaacttttt caggagatta tttcaggaaa cgctaccgaa tgagcaggtc cttatttctc
      181 cgtattgctt atgctattac aaattacact gctgaaccat tacctggtta ttttaaattc
      241 tttgaacaac gttatgattg tacacaccga cttggtttta ataattatca aaaatgtaca
      301 tcggccatac gtcaattggc atacggaatt gcacctgatg catttgatga atatttacat
      361 atgggccgac aaacctcatc tgattgttta gagaattgtt gtaaatgtat tgtgtatctg
      421 atttcgactc agtatttaag gaaacctact ggagatgaag ttcgccgatt gcatgctaaa
      481 cactccgaaa tgaatggttt tcccggcatg ttaggtagtc tcgattgcat gcattgggcg
      541 tggaaaaatt atccggtggt gtggcagggt cattacacga ggacaattca cgaagggcca
      601 acaatatttc tcgaggcggt tgcatcgtac gattaa
//
LOCUS       XR_011757401            1136 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841189), transcript variant X1, ncRNA.
ACCESSION   XR_011757401
VERSION     XR_011757401.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1136
                     /gene="LOC139841189"
                     /note="uncharacterized LOC139841189; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841189"
     ncRNA           1..1136
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841189"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139841189"
ORIGIN      
        1 cctctctccc tttaccctct ctcttcagtg ctcctacaac cacaccatta acaccgccga
       61 ttgtggcctc cggcgcccgt gacaaacctc gccaccacag cagatttaat cgctgcaatt
      121 ttacgcacag aacggtacta attttgtata atattgccga tatacataaa ctcgtcggga
      181 cgttttccgg ttagggtttt tcgatttttg gcgacctttt atatattact gagtaataag
      241 tagcgtgctt aaacagggtt atcatatttc gctttttctt tagtccagca aattgaataa
      301 gctgcgtaag ttatgtgcta tttccttttt ttgtataatt atcatagttt tggattgtgt
      361 aattatatgt tttttgttat aggatcacca caacatttcg atttcgtgcc tattggtatg
      421 tctgtttgtt ttaagtttat tgttgtttgg atgcattttt atgatcgtac tgttcttgat
      481 tgtttgtatt tgttatttta tggtgcttat gtgattgaaa gtatttaagg tatgtgttgt
      541 ttctattttc cgtatttcaa tttttttgct gatgttgttg ttgttgatga tgtttttttt
      601 gcttttgttt tcatggttaa ataatgatga tgatgatgat gatgatggtg tactgtttta
      661 aatgtatcaa atactgtata tgtggtgttt gctcatactg tattgtaagc cacacattaa
      721 tcgcttaaaa agttgaagga aatgcccaca agaatcgacg aagggaacgt gctgatcaat
      781 taagagctcg agttgttgat gatgtaaaga gactaaaaga gattgaatgc tgatcaaatt
      841 gtgaaacact gacacggata cgagtgtagc agctgttttt gcgagttggc tcttattctt
      901 atgcttatgc ttatgttgta ctatggtttg gaaactcaga taactacacc ggttttggcc
      961 agggcttaga tcggtttggc tttgctattt ttttaaatat gtatgcagaa taaataatga
     1021 ataggtcgga tttagtagtt tgtatctatg tgtggaaatg acaagcttca ttttgaatgt
     1081 aaactcactg ggctcaatgg ttgtacattg taatcttatc tcaactatca ttttag
//
LOCUS       XR_011757402            1059 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841189), transcript variant X2, ncRNA.
ACCESSION   XR_011757402
VERSION     XR_011757402.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1059
                     /gene="LOC139841189"
                     /note="uncharacterized LOC139841189; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841189"
     ncRNA           1..1059
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841189"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139841189"
ORIGIN      
        1 cctctctccc tttaccctct ctcttcagtg ctcctacaac cacaccatta acaccgccga
       61 ttgtggcctc cggcgcccgt gacaaacctc gccaccacag cagatttaat cgctgcaatt
      121 ttacgcacag aacggtacta attttgtata atattgccga tatacataaa ctcgtcggga
      181 cgttttccgg ttagggtttt tcgatttttg gcgacctttt atatattact gagtaataag
      241 tagcgtgctt aaacagggtt atcatatttc gctttttctt tagtccagca aattgaataa
      301 gctgcgatca ccacaacatt tcgatttcgt gcctattggt atgtctgttt gttttaagtt
      361 tattgttgtt tggatgcatt tttatgatcg tactgttctt gattgtttgt atttgttatt
      421 ttatggtgct tatgtgattg aaagtattta aggtatgtgt tgtttctatt ttccgtattt
      481 caattttttt gctgatgttg ttgttgttga tgatgttttt tttgcttttg ttttcatggt
      541 taaataatga tgatgatgat gatgatgatg gtgtactgtt ttaaatgtat caaatactgt
      601 atatgtggtg tttgctcata ctgtattgta agccacacat taatcgctta aaaagttgaa
      661 ggaaatgccc acaagaatcg acgaagggaa cgtgctgatc aattaagagc tcgagttgtt
      721 gatgatgtaa agagactaaa agagattgaa tgctgatcaa attgtgaaac actgacacgg
      781 atacgagtgt agcagctgtt tttgcgagtt ggctcttatt cttatgctta tgcttatgtt
      841 gtactatggt ttggaaactc agataactac accggttttg gccagggctt agatcggttt
      901 ggctttgcta tttttttaaa tatgtatgca gaataaataa tgaataggtc ggatttagta
      961 gtttgtatct atgtgtggaa atgacaagct tcattttgaa tgtaaactca ctgggctcaa
     1021 tggttgtaca ttgtaatctt atctcaacta tcattttag
//
LOCUS       XR_011757403             692 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841189), transcript variant X3, ncRNA.
ACCESSION   XR_011757403
VERSION     XR_011757403.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..692
                     /gene="LOC139841189"
                     /note="uncharacterized LOC139841189; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841189"
     ncRNA           1..692
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841189"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139841189"
ORIGIN      
        1 cctctctccc tttaccctct ctcttcagtg ctcctacaac cacaccatta acaccgccga
       61 ttgtggcctc cggcgcccgt gacaaacctc gccaccacag cagatttaat cgctgcaatt
      121 ttacgcacag aacggtacta attttgtata atattgccga tatacataaa ctcgtcggga
      181 cgttttccgg ttagggtttt tcgatttttg gcgacctttt atatattact gagtaataag
      241 tagcgtgctt aaacagtatt gtaagccaca cattaatcgc ttaaaaagtt gaaggaaatg
      301 cccacaagaa tcgacgaagg gaacgtgctg atcaattaag agctcgagtt gttgatgatg
      361 taaagagact aaaagagatt gaatgctgat caaattgtga aacactgaca cggatacgag
      421 tgtagcagct gtttttgcga gttggctctt attcttatgc ttatgcttat gttgtactat
      481 ggtttggaaa ctcagataac tacaccggtt ttggccaggg cttagatcgg tttggctttg
      541 ctattttttt aaatatgtat gcagaataaa taatgaatag gtcggattta gtagtttgta
      601 tctatgtgtg gaaatgacaa gcttcatttt gaatgtaaac tcactgggct caatggttgt
      661 acattgtaat cttatctcaa ctatcatttt ag
//
LOCUS       XR_011757404             728 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841189), transcript variant X4, ncRNA.
ACCESSION   XR_011757404
VERSION     XR_011757404.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..728
                     /gene="LOC139841189"
                     /note="uncharacterized LOC139841189; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841189"
     ncRNA           1..728
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841189"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139841189"
ORIGIN      
        1 cttttgtttt ttgaaaataa aaaactttta tttcatatat actcaatata tttacatggt
       61 atatatatac atctacatct tcacattgtt ttctctatta ttttttaaat tggatatctt
      121 ttaactaaag gtgacaaatt gggtgggtcg gttaattgtt tatttttact atggattata
      181 gaatctcaaa attgtggtgg caggatagca taatctgaat ttagttccct cttcactaag
      241 tgagaatgtg aaacccaagt tgctaaagtg aaagaccata tataagttaa attattgtaa
      301 gccacacatt aatcgcttaa aaagttgaag gaaatgccca caagaatcga cgaagggaac
      361 gtgctgatca attaagagct cgagttgttg atgatgtaaa gagactaaaa gagattgaat
      421 gctgatcaaa ttgtgaaaca ctgacacgga tacgagtgta gcagctgttt ttgcgagttg
      481 gctcttattc ttatgcttat gcttatgttg tactatggtt tggaaactca gataactaca
      541 ccggttttgg ccagggctta gatcggtttg gctttgctat ttttttaaat atgtatgcag
      601 aataaataat gaataggtcg gatttagtag tttgtatcta tgtgtggaaa tgacaagctt
      661 cattttgaat gtaaactcac tgggctcaat ggttgtacat tgtaatctta tctcaactat
      721 cattttag
//
LOCUS       XM_071831418             972 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841190), mRNA.
ACCESSION   XM_071831418
VERSION     XM_071831418.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..972
                     /gene="LOC139841190"
                     /note="uncharacterized LOC139841190; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841190"
     CDS             1..972
                     /gene="LOC139841190"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687519.1"
                     /db_xref="GeneID:139841190"
                     /translation="MSIYGGSGHIIAGGSHCVSSSNSLWLDIVKTDHKVDELGINFSR
                     SMVKTIGNGCSTRFWHDHWLGNEPLKSAYTRLFRLEQDKDVMIYNRVLRQTPSVVSDA
                     GWVQDPYGQTRCELTEINNLLQALTFDSSNEDSWRWTLCGNGVFNTKVLTELIFSKMF
                     QTNAPTNCETLRNNFIPKKVEIFIWWAKRKRLPSFLELDMRGIDLHSIRCPLCVDELE
                     SVEHSLLSCKLAKIIWDKVYSWWDKQNVLHQTFEDIYNNNDMNSEVGAKVWQAVKWVC
                     TYLIWRNRNQKVFKLSSWTPPNALRLALYACELITVAIFAAFYVCFS"
     misc_feature    <517..699
                     /gene="LOC139841190"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagcattt atggggggtc aggacatatt attgcgggtg ggtctcattg tgtttctagc
       61 tctaatagtt tatggctaga tattgttaaa acagatcaca aagtggacga gcttggaatt
      121 aacttttcaa gatcaatggt gaaaacaatc ggaaatggct gtagcactag gttctggcat
      181 gaccactggc tcggtaacga gcctctaaaa tctgcgtata ccagattatt tcggctggaa
      241 caagataagg atgtcatgat ctataatcga gttcttcggc agaccccttc ggtggtttct
      301 gatgcaggtt gggttcaaga tccatatggg caaactagat gcgagttaac agagataaat
      361 aacttactac aagctttgac tttcgactca tcgaatgaag actcgtggag atggacgcta
      421 tgcggtaatg gtgtttttaa tacaaaggtt ctcactgaac ttatcttctc gaaaatgttt
      481 caaactaatg ctcctacaaa ttgtgaaact ttgagaaaca atttcatccc gaagaaagtt
      541 gaaatcttca tatggtgggc aaaacggaaa aggcttccct cattcttgga acttgacatg
      601 aggggtattg accttcactc catccgttgc cctctatgtg ttgatgaatt ggaatcggtg
      661 gaacattctt tactctcgtg taaacttgca aaaattattt gggacaaggt gtactcgtgg
      721 tgggacaaac aaaatgtgct tcatcaaacg tttgaggaca tctacaacaa caatgatatg
      781 aactccgaag tcggtgcgaa ggtttggcaa gcggtcaagt gggtatgcac gtatcttatt
      841 tggagaaatc ggaaccaaaa ggtgtttaaa ctctcgagtt ggactcctcc gaatgcttta
      901 agactagccc tttacgcttg cgagttgatc acggttgcaa tctttgcagc cttctatgtt
      961 tgtttttcat ga
//
LOCUS       XM_071831419             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WUSCHEL-related homeobox
            4-like (LOC139841191), mRNA.
ACCESSION   XM_071831419
VERSION     XM_071831419.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139841191"
                     /note="WUSCHEL-related homeobox 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841191"
     CDS             1..588
                     /gene="LOC139841191"
                     /codon_start=1
                     /product="WUSCHEL-related homeobox 4-like"
                     /protein_id="XP_071687520.1"
                     /db_xref="GeneID:139841191"
                     /translation="MTSAPMPVQTTVKGGNSGGGGGGTRWCPTPEQVMLLEGMYRNGL
                     KTPTATQIQQITARLSIYGKIQGKNVFYWFQNHKARDRQKLRKKLMALYQQHRIYPTY
                     DHQFLPPLHQVNEVEDASNCKPIINNWKVDLPSNQISSCRNMCDCPLMSIMMMDHNHG
                     STTQCTRVPPKTLQLFPITTTNLKQDDESTITSKS"
     misc_feature    70..249
                     /gene="LOC139841191"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      
        1 atgacatctg cgcccatgcc cgtgcaaaca accgttaagg gcggcaatag cggtggtggc
       61 ggtggtggaa caagatggtg tccaacacca gagcaagtga tgctattaga aggaatgtat
      121 agaaatggcc taaaaacacc aacggcaact caaatacagc aaatcactgc aaggttatca
      181 atttatggaa aaattcaagg aaaaaatgtg ttttattggt ttcaaaatca taaagctcgt
      241 gatagacaaa agcttagaaa gaaattaatg gctttgtacc aacaacatcg catttacccg
      301 acttatgatc atcaatttct tcctcctctt catcaggtta atgaagttga agatgcatca
      361 aattgtaaac caattatcaa caattggaag gtggacctcc catctaatca gatcagttca
      421 tgcagaaaca tgtgtgattg tccacttatg tcaataatga tgatggatca taaccatggt
      481 tcaactacac aatgcacaag agtaccacca aaaaccttgc agctcttccc aatcaccaca
      541 acaaatctca aacaagatga tgagtccacc atcacctcaa aatcataa
//
LOCUS       XM_071831420            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841192), mRNA.
ACCESSION   XM_071831420
VERSION     XM_071831420.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139841192"
                     /note="uncharacterized LOC139841192; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841192"
     CDS             1..1089
                     /gene="LOC139841192"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687521.1"
                     /db_xref="GeneID:139841192"
                     /translation="MAKWAIELGEHEISFPPRSAVKGQVLVDYLAEIAGDIEVSHESK
                     EIHTDGACGPEGAGAGIVLKSPEGEKYTFAMRFSFPVTNNEAEYEALLSGMRVAKYLE
                     VKELLVYVDSQLVANQFNGIFEAHDESMQKYLKLVQELAFDFDLFLITQVSRTLNKKA
                     NALSKLAALTFSHFKKEIWVEEVKVKSIEEDSVSAAVEEEEQSWMTPIIEFLTKGTLP
                     IDSSEVRKIKMKAPMYLLDKGILYRKSFLGPHLRCLNPTQAESIIREVHEGMCTLHSG
                     HKTVASKIMRLGYYWQSMYKDAAEVIRKFQSYQLHAPVSKAPRHPMIPVASPWPFCKW
                     AIDIVGPFPAGPGGVKFLVVAIDYFTKW"
     misc_feature    133..504
                     /gene="LOC139841192"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(145..156,244..252,259..261,331..333,451..453,
                     493..495)
                     /gene="LOC139841192"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    760..939
                     /gene="LOC139841192"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggccaaat gggctattga attgggagag catgaaataa gcttcccacc acgaagtgcg
       61 gtaaaagggc aagtcctagt agattatctg gctgaaatag ccggagatat cgaagtctcg
      121 catgaatcaa aagaaataca cacagacggg gcttgtggcc cagaaggcgc aggggcagga
      181 atagtcctaa aaagtccaga aggagagaaa tataccttcg caatgcgatt cagcttccct
      241 gtcacaaata atgaagctga atatgaagca ttgttatctg ggatgcgggt agcaaaatat
      301 ctggaggtta aagaactgtt agtatatgtt gattcgcagt tagttgcaaa ccaatttaac
      361 ggaatattcg aagcacacga tgaatcaatg caaaaatact taaagcttgt gcaagagcta
      421 gcatttgact tcgatttatt cctgataact caggtttcga ggacgctaaa taaaaaggcg
      481 aatgcgctaa gtaagttagc tgcattaaca ttcagtcatt ttaagaaaga aatttgggtt
      541 gaggaagtta aagtaaaatc tattgaagaa gacagtgttt cagctgcagt tgaagaagag
      601 gagcagagtt ggatgacacc aataatagaa tttttaacca aaggtacatt gccgattgat
      661 tcaagcgaag taagaaagat taagatgaaa gcaccaatgt atctgttaga caagggaatt
      721 ctgtatagaa agtcttttct gggacctcat ttgcggtgcc ttaatccaac tcaagcggag
      781 tcaatcatac gggaagtaca cgagggaatg tgcactctgc attcgggaca caaaacagtt
      841 gcatccaaaa taatgcggct cggatattat tggcagtcaa tgtacaaaga tgccgcagag
      901 gtaatacgca agtttcaatc gtatcaactt cacgcaccgg taagcaaggc tccgcgacat
      961 cctatgatac cggtcgcgtc tccatggccg ttctgcaaat gggcaatcga catagtgggg
     1021 ccattccccg caggaccagg gggtgtaaaa tttctagtag tggccattga ttatttcacg
     1081 aaatggtag
//
LOCUS       XM_071831421             870 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841193), mRNA.
ACCESSION   XM_071831421
VERSION     XM_071831421.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..870
                     /gene="LOC139841193"
                     /note="uncharacterized LOC139841193; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841193"
     CDS             1..870
                     /gene="LOC139841193"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687522.1"
                     /db_xref="GeneID:139841193"
                     /translation="MVTSGQTNQRRKLEVSEEWENTPIIFPAIAQEPSDAPITIKGRV
                     KSCGYIIKRLHVDTGCGVDIMYEHCFRLLPGAVRAKLVAPNTALSGFSGESVWPIGII
                     ELELELVDDDNKELVRSTIVEFAVVRSYSKYNALLGRTSLQKLAAIPSTVHGLIKFPT
                     PLGIATIWSKKQDASIAAVEQAEQQPSEAEQIRSYMIIANPRHPVQKIKIGRGLCDET
                     KFKLLNILASNTDVFEWNEADMTGVPREIAEHKLNANPSLTPVRQKKRGMAPERSEWL
                     KAEVDKLVKANIL"
ORIGIN      
        1 atggtaacca gcggacagac aaatcagagg cgcaagttag aggtatctga ggaatgggaa
       61 aacactccca tcatattccc ggccatagca caggaaccct cggatgcgcc catcacaatt
      121 aaagggcgtg tcaaaagctg tgggtacatc atcaagcgat tgcatgtaga caccggttgc
      181 ggtgttgata taatgtacga gcactgtttt cgcttgctgc caggggctgt gagagccaag
      241 ctagtggctc ctaacactgc gttatcagga ttttctgggg agtccgtatg gccaatcggg
      301 atcatcgaat tagagttgga gctggtggac gatgataata aggagttagt gagaagcacg
      361 atagtagaat ttgccgtcgt aaggtcttac tcaaaataca acgcgctttt agggcgcacg
      421 agtttgcaaa aattagcagc catcccttcc acggtacacg gccttatcaa gttcccaaca
      481 ccgttaggaa ttgcaacgat atggtcaaaa aagcaagatg caagcattgc ggccgtagaa
      541 caagcagaac aacagccgag tgaggcagag caaattcgaa gctacatgat catcgcaaac
      601 ccgcgacatc cagtacagaa aattaaaatt ggcagaggat tgtgtgatga gacaaagttt
      661 aagcttctta atatattagc ttctaatacg gacgtcttcg aatggaatga agctgacatg
      721 acgggcgtac caagggaaat tgctgagcac aagcttaacg caaatcctag tctgacacca
      781 gtacgacaaa agaaacgagg catggctcct gaaagaagtg aatggttgaa ggcagaagtc
      841 gataagttgg tcaaagcaaa catcttgtga
//
LOCUS       XM_071831422            3097 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calmodulin-interacting
            protein 111-like (LOC139841194), mRNA.
ACCESSION   XM_071831422
VERSION     XM_071831422.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3097
                     /gene="LOC139841194"
                     /note="calmodulin-interacting protein 111-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139841194"
     CDS             78..2942
                     /gene="LOC139841194"
                     /codon_start=1
                     /product="calmodulin-interacting protein 111-like"
                     /protein_id="XP_071687523.1"
                     /db_xref="GeneID:139841194"
                     /translation="MPSKKKSSKSKANSNSDATTPSPLGNSSSYSNLNSNNNHEDGEQ
                     SLLCSLETVSTIYPSFIGASALICSLIEDSNIAIDSKGCKVWVSESALIASSITPGSI
                     VSVSLASLRKDVPGYPLSSLMDECGRHYGVNENMAKEIGNYFVLATVFPSLKVSKNGV
                     RLSSSLSSALGYPVSGRIVFVYPVNQRNKSISIDKCQDLHLSLISSKSSISIKSSKMS
                     HVDLLSENGNISSPKTPSMTRSKFSSPCSSQPTSPRYRETQSNSFDSVVDSFNIKEVL
                     EDEIGRKLLQTCTLSFLYSRYLLCGNLVVIPILSELCLFKVVSAEKVSGNENNVGLFM
                     QSPDQSSIGNAFLVDHGTKVHLFFEKTDFDLCSEDSVDSIVVDIPKLGGLLKEYTVLK
                     DIIVSSTIKNRLSSMGLRPTKGVLLHGPPGTGKTSLARLCANDAGVNLFSVNGPEIIS
                     QFYGESEQALHEVFDSASRAPPAVVFIDELDAIAPSRKDGGEELSGRIVATLLNLMDG
                     ISRTESLLVIAATNRPDSIEPALRRPGRLDREIEIGVPSPSQRYDILLALLNEKEHRL
                     SDMEIHHLAMTTHGFVGADLASLCNEAAFICLRRFIGKINDNQNLNSCSDDMDLHLKD
                     NSKGSSLSNSGVNVESIETDPMGGSLSVTIEDFEKARIKVRPSAMREVILEVPKVSWK
                     DVGGQEEVKMQLMEAVEWPQKHQDAFRRIGTRPPTGVLLFGPPGCSKTLLTRAVASEA
                     KLNFLAVKGPELFSKWVGESEKAVKSLFAKARANAPSIVFFDELDGLASIRGKENDGV
                     SVADRVMSQLLVELDGLNQRVNVTVIAATNRPDKIDSALLRPGRFDRLVYVGPPNEKD
                     RKEIFRIHLRKMSCSSDVCFEELAHLSEGCTGADISLICREAAVAAIEEKHDAAEVRM
                     EHIRSAIEQMQPSDVESYEDLTRKFQRLVSVATPENDSSP"
     misc_feature    <1296..2903
                     /gene="LOC139841194"
                     /note="AAA family ATPase, CDC48 subfamily; Region: CDC48;
                     TIGR01243"
                     /db_xref="CDD:273521"
ORIGIN      
        1 accagaaccc ctactgggtt taacaaaatc taaaacccta aaccgccaaa ttccttttaa
       61 cgattctgct tgaaacaatg ccttcaaaga aaaaatcatc aaaatcaaag gcgaattcca
      121 attcagatgc aacaacacca tctccacttg gtaattcatc ttcatattca aatctaaact
      181 ctaataacaa tcatgaagat ggtgaacaat cattattgtg ctcacttgaa acagtttcca
      241 ccatatatcc gtcgttcatc ggtgcttctg ctttaatctg tagtttaatt gaagattcta
      301 atattgcaat tgattcgaaa ggatgtaaag tttgggtctc agaatctgct ctgattgctt
      361 cttcaatcac tcctggttcc attgtttctg tttcacttgc ttcgttaaga aaagatgtac
      421 caggttaccc tcttagctca ttaatggatg aatgtggcag gcattatggg gtcaatgaga
      481 acatggctaa agaaataggg aattactttg ttctagctac agtttttcca tctttaaagg
      541 tttcaaaaaa tggtgtgcgg ttatcttcga gcctatcatc tgcattgggt tatccagttt
      601 ccggcaggat agttttcgtg tatcctgtca atcaaaggaa taaatccatt tcaatagaca
      661 agtgtcaaga cctacattta tctttaattt cttcaaagag ttcaattagc attaaaagta
      721 gtaaaatgtc tcacgttgat cttttatctg aaaatggaaa catttcatct ccaaagacac
      781 catcaatgac tcgatcgaag ttcagctctc cctgttctag ccagccaact tcaccaagat
      841 atagagaaac acagtcaaac tcgtttgact cagtagttga ctcgtttaat ataaaagagg
      901 ttttggagga tgaaatagga aggaagcttc ttcagacttg tactctgtcg ttcttatatt
      961 cccgttatct gctttgcgga aaccttgttg taattccaat actttcagag ctttgtcttt
     1021 tcaaggtcgt cagtgcagaa aaagtatcgg gaaatgaaaa taatgttggt ttgtttatgc
     1081 aatcaccaga tcaatctagt attggtaatg cttttctggt agaccatgga acaaaagttc
     1141 atttattttt tgagaaaacc gattttgatc tatgtagtga ggatagcgta gatagcatag
     1201 tagttgatat ccctaaattg ggtggcttgt taaaggagta tacagttttg aaggatatta
     1261 ttgtttcatc aacaattaag aacagacttt caagtatggg tttacgtcca acaaaaggag
     1321 tgctacttca tggtccacca ggcacaggga agacttcttt ggctcgattg tgtgctaatg
     1381 atgctggcgt taatctcttc tctgtaaatg gaccagaaat tatcagtcaa ttttatggtg
     1441 aaagtgaaca agcattgcat gaagtattcg attcagctag cagagctcca cctgctgtgg
     1501 tattcataga tgagctggat gccattgcac catcacgaaa agatggtggt gaagaactat
     1561 ctggaagaat cgttgcaaca ctactaaatt taatggatgg aattagtaga accgaaagtc
     1621 tacttgttat tgctgcaacc aatagacccg acagtattga gccagcactt agacgccctg
     1681 gtagactcga cagggaaatc gaaataggtg tgccatctcc cagtcaacgt tatgatatat
     1741 tacttgctct gctcaacgaa aaagaacacc gtctttcaga tatggaaatt catcatttgg
     1801 ctatgacaac tcacgggttt gtgggtgctg atctggcatc cctctgcaat gaagctgcct
     1861 ttatttgtct taggcgcttc attggcaaga tcaacgataa tcagaacctt aattcatgtt
     1921 cagatgatat ggacttgcat ctgaaagata attcaaaggg ttcgtcttta tcaaattcag
     1981 gggtcaatgt agaaagtatt gaaactgatc caatgggggg aagtttaagt gtcactattg
     2041 aagattttga gaaggcgaga attaaagtga gaccaagcgc catgagagag gtgatacttg
     2101 aggtaccaaa agttagttgg aaagacgttg gtggtcaaga ggaggttaaa atgcagttaa
     2161 tggaagctgt agagtggcct caaaagcacc aggatgcgtt caggcgtatc ggaactcggc
     2221 ccccaacagg agtcttatta tttggtcccc ctgggtgcag caaaaccctt ctgacccgtg
     2281 cagtcgcatc tgaagccaaa ctcaattttc ttgctgtgaa gggcccagaa cttttcagta
     2341 aatgggttgg tgaatcagag aaggctgtaa agtctctgtt tgcaaaggca cgggctaatg
     2401 ccccttcgat tgtgtttttt gatgagttag atggtcttgc tagtattcga ggaaaggaaa
     2461 acgatggggt ttcggttgct gatcgtgtta tgagtcaact tcttgttgaa ttagacggtt
     2521 tgaaccagag agttaatgtc actgttattg ctgcaacaaa ccgaccagat aagatcgact
     2581 ccgccctttt gaggccagga cgttttgata ggctcgtgta tgtgggccca ccaaatgaaa
     2641 aagaccgtaa agagattttt cgtatccatt tgcgtaaaat gtcttgtagc tctgatgtat
     2701 gttttgagga gttggctcat ctttctgaag gttgtactgg ggctgacatt tctctaatat
     2761 gtcgtgaagc ggctgttgct gctatcgagg agaaacatga tgcagcggaa gtaagaatgg
     2821 agcatataag atctgcaatc gaacaaatgc agccatcaga tgtagagtct tatgaggact
     2881 tgacaagaaa atttcaaaga cttgtgtcgg ttgctacgcc agaaaatgat tcgagtccgt
     2941 gaaacatctt taagatgatt aagcacagta tctaaacggt aattccctta attaaacact
     3001 tattgtttta cctatcaagg tatctatact tacagctaat gtatatatgg tgaatgagta
     3061 ctgcatttgt ggggtattat ggtaaaaggg atcgtca
//
LOCUS       XM_071831423             507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841195), mRNA.
ACCESSION   XM_071831423
VERSION     XM_071831423.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..507
                     /gene="LOC139841195"
                     /note="uncharacterized LOC139841195; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841195"
     CDS             1..507
                     /gene="LOC139841195"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687524.1"
                     /db_xref="GeneID:139841195"
                     /translation="MESFKAANRDYNPKDIRDDVGNRFRVSISYNQAWRAKCHAIEML
                     RGSMDDSFRMLPIYLHNIKIHNPGSMTNVVTDNENRFVMCYMSFGAVIRSFVQNVRPI
                     IIVDGAHLKAGYLGTNLVAVAMDANNGILPLAYGIGEGETNEVWSWFFGNLRDHLESC
                     EVLGSQTL"
     misc_feature    304..>477
                     /gene="LOC139841195"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atggaatcgt tcaaagctgc aaatcgagac tataatccaa aagatatacg tgatgatgtt
       61 ggcaaccgtt ttcgggtgag catttcttac aatcaagcat ggagagccaa gtgtcatgca
      121 atagagatgc ttcgtggcag tatggatgac tcgttccgaa tgcttcccat ttatcttcat
      181 aacattaaga ttcataaccc aggaagcatg acaaatgtgg tgactgacaa tgaaaataga
      241 ttcgtgatgt gttacatgtc ctttggcgca gttattcgat catttgtcca aaatgttcgc
      301 cctattatca tcgttgatgg tgcacatttg aaagctggat acttgggtac aaatttagtc
      361 gctgttgcaa tggatgccaa taacggaatt ttgccattgg cttatggaat tggtgaaggc
      421 gagacaaacg aggtttggtc atggtttttt ggcaatctaa gagatcattt agagagttgt
      481 gaagttttag gtagtcagac actgtaa
//
LOCUS       XM_071831424             534 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841196), mRNA.
ACCESSION   XM_071831424
VERSION     XM_071831424.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..534
                     /gene="LOC139841196"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139841196"
     CDS             1..534
                     /gene="LOC139841196"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687525.1"
                     /db_xref="GeneID:139841196"
                     /translation="MKIPQGFSKEGETRVCRLKKSIYGLKQASRNWYHKFTQALIALG
                     FCRSEADHSLFMPSAFPIEQIINLIDVKVLQKNDAKSYRRLVGHLLYLQATRPDITYS
                     VNILSQFADDPRQPHLDAVHRVLRYLKTIVVQGVSLPRDGGFDLSAYCDFDWLGCPYT
                     RKSRTEYILLLGGAPIS"
     misc_feature    <1..>165
                     /gene="LOC139841196"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    442..>531
                     /gene="LOC139841196"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgaagattc cgcaaggatt ttccaaagaa ggagaaacac gtgtgtgtcg attaaagaag
       61 tcaatctatg gcttgaaaca agcttcacga aattggtatc acaaatttac acaagcgctc
      121 attgctcttg gtttttgtcg atctgaggcg gatcattctt tgttcatgcc tagtgctttt
      181 cccattgagc aaatcataaa cttgatagat gtgaaagttc tccaaaaaaa tgatgctaag
      241 agttatcgtc gtttggttgg tcacttacta tatttgcaag caacacgacc cgatatcacg
      301 tactcagtta atattctttc acaatttgcc gatgatccta gacaacctca cctggatgcg
      361 gttcataggg tgcttcgtta tttaaaaaca atagtagttc aaggggtttc attgccacgt
      421 gatggtggtt ttgatctctc ggcttattgt gatttcgatt ggcttggttg cccctacacc
      481 cggaaatctc gaaccgaata tatacttctc cttggtggag ctccaatctc ttag
//
LOCUS       XM_071831425             339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841197), mRNA.
ACCESSION   XM_071831425
VERSION     XM_071831425.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..339
                     /gene="LOC139841197"
                     /note="uncharacterized LOC139841197; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841197"
     CDS             1..339
                     /gene="LOC139841197"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687526.1"
                     /db_xref="GeneID:139841197"
                     /translation="MEKDIRSSVKYANTAYEIWNDLKERFAKESAPRAYGLKQTLSTT
                     HQNGTTVPVYYTKLRSLWDEIDCALEVSRFSCSGCKCDIGKKISNLKDKERLYEFLMR
                     LDAQFSVIKT"
     misc_feature    25..>336
                     /gene="LOC139841197"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggagaagg atatacggtc cagtgttaaa tatgctaaca ccgcgtacga aatctggaat
       61 gatttaaaag agcgctttgc caaagaaagt gcaccaagag catacggact aaaacaaact
      121 ctctcaacta ctcatcaaaa cggcaccacg gtgcctgttt attatacaaa acttcgcagc
      181 ttgtgggatg agattgattg tgcactagag gtttcaaggt tttcttgcag cggatgtaaa
      241 tgtgatatag ggaagaaaat cagcaacttg aaagataaag aaagacttta tgaattccta
      301 atgaggcttg atgctcagtt ctccgtcatc aaaacatag
//
LOCUS       XM_071831426             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841198), mRNA.
ACCESSION   XM_071831426
VERSION     XM_071831426.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139841198"
                     /note="uncharacterized LOC139841198; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841198"
     CDS             1..441
                     /gene="LOC139841198"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687527.1"
                     /db_xref="GeneID:139841198"
                     /translation="MATACMSTCIANDARVPVRASYVNLYKCPDSDREFVRSVSKNSQ
                     GESQGHPRVVDSISCRQLYLRSYTFSRKESLNERTMNCIGRVKEKASIRGKETESTNS
                     GRRRRRRRKKKCTVIMKAKEGSYNALVSIFRRLLSCTTKVDVVD"
ORIGIN      
        1 atggcaactg cttgcatgtc aacatgcata gcgaacgatg cccgtgtccc ggttcgtgca
       61 tcatatgtta acctctacaa atgtcctgat tctgaccgtg aattcgttcg gtcagttagt
      121 aaaaatagcc aaggagaaag ccaaggacac cctcgtgttg tcgatagtat ttcatgtagg
      181 caactttacc ttcgaagcta cactttttcg agaaaagaaa gtttgaatga aagaactatg
      241 aattgtattg gacgagttaa agaaaaagcg tccattcgcg gtaaagaaac agagtccacg
      301 aatagtggac ggaggaggag gagaagaagg aagaagaagt gtaccgtgat aatgaaggcg
      361 aaagaaggtt cgtataatgc attggtttcg atctttcgta ggttgctttc atgtactaca
      421 aaggttgatg ttgtggatta a
//
LOCUS       XM_071831427             885 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841199), mRNA.
ACCESSION   XM_071831427
VERSION     XM_071831427.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..885
                     /gene="LOC139841199"
                     /note="uncharacterized LOC139841199; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841199"
     CDS             1..885
                     /gene="LOC139841199"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687528.1"
                     /db_xref="GeneID:139841199"
                     /translation="MSVGGSFASSTGQKRKNPPPPEARAFQMSVDTATETDDAITGMF
                     LINSSPARVLFDCRANCSFMSVTLCDKLKFPINVLSEPLRIEVGDGRTVPVTTSVSGV
                     TIEIDGNEFPITCLVMPIPSFDVVLGMDWLGRHKASIKCDKKIIHFPLADGTRAVARG
                     DRGRFNCPLISTMKAKKSLAKGCDSFLAYVIDAQKEKKSVSDIPIVSEFPEVFPDELP
                     GLPPVRELEYKIELLPGFTTVAKAPYRLVPSEIRDMMSQIQELLDGGFIRPSSSPWGA
                     PVLFVKNKDGTLRMCIDY"
     misc_feature    67..459
                     /gene="LOC139841199"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(166..168,172..174,178..180,253..261,376..378)
                     /gene="LOC139841199"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    166..174
                     /gene="LOC139841199"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    166..168
                     /gene="LOC139841199"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(253..264,274..285)
                     /gene="LOC139841199"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    793..>882
                     /gene="LOC139841199"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtcagtcg gaggatcatt tgcttcttca acgggacaga agcgaaagaa tcctccacca
       61 cctgaagcaa gagccttcca aatgtcagtt gatacagcta ctgaaaccga cgatgcgatt
      121 accggtatgt ttctgataaa ttcttcgccg gctcgtgtgt tatttgattg tagagcaaat
      181 tgctctttta tgtctgttac actatgtgat aagttgaaat ttcctatcaa cgtattatct
      241 gaacctttaa gaatagaagt gggtgatggt agaacggttc cagtcacaac ctctgtgtct
      301 ggagtaacca ttgaaataga tgggaatgaa tttcctataa cttgtcttgt tatgcctata
      361 ccgagctttg atgtcgtatt aggtatggat tggttaggcc gccataaggc aagcataaaa
      421 tgtgataaga aaataattca ttttcctttg gccgatggga cacgggctgt ggcccgaggt
      481 gaccggggca ggtttaattg tccattgatt tcgacgatga aagctaagaa atcgttagcc
      541 aaggggtgtg attcgtttct agcatatgta atcgacgcac agaaagagaa gaaatccgtg
      601 tccgatatac cgatagtgtc cgaattccca gaagtcttcc cagatgaatt gccgggttta
      661 ccgccagtta gggaattaga atataaaatc gagttgttgc cgggattcac aacagttgct
      721 aaagctccgt atcgattagt accatccgag attcgtgata tgatgtcgca aattcaggag
      781 ttgctagatg gtgggtttat tcgaccaagt tcttcgccat ggggtgctcc agtgttgttc
      841 gtgaaaaaca aagacggaac tctccgtatg tgcattgatt actga
//
LOCUS       XM_071831428            1188 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841200), mRNA.
ACCESSION   XM_071831428
VERSION     XM_071831428.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1188
                     /gene="LOC139841200"
                     /note="uncharacterized LOC139841200; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139841200"
     CDS             1..1188
                     /gene="LOC139841200"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687529.1"
                     /db_xref="GeneID:139841200"
                     /translation="MDESPRVNDALNSGELNLDSLVRDPGLRPSFMDYSTNQHDEIRI
                     AYIKYGPYQLCKSKYPQSLSGSSGHIEHVIEKQTTQEIIDNRLRVRTFVEMIKWLTMQ
                     ACALRGHDERPDSKNQGNFLELLKLIASYNKEVEKVILQNAPQNARYTSPDVQKEILQ
                     IFARNVQQSICDKKKEQMAIDVRFIDREGYVKERFLDLVHLQLALVAASKDMVEVHKF
                     FKNLNFIVNVIDSSSKRHDQLQDAQVSEIAHLAEIRELESGKGVNQIQSLQRPRDTRW
                     SSHYRSIWSLLKLYGPAIVVLLEIAINGSTPSQKGDATFDLTELLSFDFVIVIHLMKK
                     IMKTTEKLCQSLQRKSHDIVNALSLISTTKLLIQNLRDQGCQSLLEKVVVFVDIIALK
                     LLK"
     misc_feature    208..669
                     /gene="LOC139841200"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atggatgaat cccctagagt aaatgatgct ttaaattcag gagagttaaa tttagattca
       61 ttagttcgag atcctggctt acgaccttca ttcatggatt attcaactaa ccaacatgac
      121 gagatcagaa tagcatatat taaatatgga ccttatcagc tttgtaagtc aaagtatcct
      181 caaagtttga gtggctcaag tggtcatata gagcatgtga ttgagaaaca aacaactcaa
      241 gagatcattg ataataggct tcgtgttaga acttttgttg agatgattaa atggctcaca
      301 atgcaagctt gtgctcttag aggtcatgat gagcggcccg attcaaaaaa tcaaggaaac
      361 ttccttgaat tgttaaagtt aattgcttct tataataaag aggttgaaaa agttattctg
      421 caaaatgctc ctcaaaatgc caggtatact tctccagatg tgcaaaaaga aattttgcaa
      481 atatttgcta gaaatgtgca acaatcgatt tgtgataaaa aaaaagagca aatggcaatt
      541 gatgtgagat ttatagatcg agaagggtat gttaaagaga gatttttaga cttggttcat
      601 ttgcaattag ctttagttgc agcatctaaa gatatggttg aggtgcacaa atttttcaag
      661 aaccttaact ttattgttaa tgtcattgat tcttcttcta agcgtcacga tcagttacaa
      721 gatgctcagg ttagtgaaat tgcacatttg gctgaaatta gagagcttga gagtggcaaa
      781 ggagtaaatc aaatccaaag tttgcaaaga cctagagata caagatggag ttcacattat
      841 cgatccatat ggagcttgtt gaaattgtat ggtcccgcca ttgtagtgct acttgaaatt
      901 gctattaacg ggtctactcc ttctcaaaaa ggtgatgcta cttttgatct taccgaatta
      961 ttgtcatttg attttgtcat tgttatacat ttgatgaaga agataatgaa aacaaccgaa
     1021 aagctttgtc aatctttaca acgtaaatct catgatatag ttaatgcttt gagtttaatt
     1081 tccacaacaa aattattgat tcaaaatcta agggatcaag gatgtcagtc acttttggaa
     1141 aaagttgttg tttttgtgga tataatagca ttgaagttac taaaatga
//
LOCUS       XM_071831429            1014 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841201), mRNA.
ACCESSION   XM_071831429
VERSION     XM_071831429.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1014
                     /gene="LOC139841201"
                     /note="uncharacterized LOC139841201; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841201"
     CDS             1..1014
                     /gene="LOC139841201"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687530.1"
                     /db_xref="GeneID:139841201"
                     /translation="MTRKRTMFDFFKPTNIDDHQSQQEVYNVREDVAKNLQSHVGDDY
                     IMDESPRVESPIEHVIEKQTTQEIIDNRLRVRTSVEMIKWLTMQACALRGHDERPDSK
                     NQGTFHELLKLIASYNKEVEKVVLQNAPQNAPQNSRYTSPDVQKEILQIFARNVQQSI
                     RDKKKRTNDIRGQGYDGASNMHGEWNGLQALIFKECPYAYYIHYFVHQLQLALVATSK
                     DMVEVHKFFKNINFIVNVIDSSSKRHDQLQDAQVSEIAHLAEIGELESGKGANQIQML
                     PEIAINGSTPSQRGYATFAFTELLSFDFVIVIHLMKKIMKTIDKLCQSLQRKSKDIVN
                     ALS"
     misc_feature    133..561
                     /gene="LOC139841201"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atgactcgaa aaagaacaat gtttgatttc tttaaaccaa caaatattga tgatcaccaa
       61 tcacaacaag aagtatataa tgttagggaa gatgttgcta aaaacttaca atcacatgtt
      121 ggtgatgatt atattatgga tgaatcccct agagttgaaa gccctataga gcatgtgatt
      181 gagaaacaaa caactcaaga gatcattgat aataggcttc gtgttagaac ttctgttgag
      241 atgattaaat ggctcacaat gcaagcttgt gctcttagag gtcatgatga gcggcccgat
      301 tcaaaaaatc aaggaacctt ccatgaattg ttaaagttaa ttgcttctta taataaagag
      361 gttgaaaaag ttgtgctgca aaatgctcct caaaatgctc ctcaaaattc caggtatact
      421 tctccagatg tgcaaaaaga aattttgcaa atatttgcta gaaatgtgca acaatcgatt
      481 cgtgataaaa aaaaaagaac aaatgatatt cgaggtcaag gatatgatgg agctagtaac
      541 atgcatggag aatggaacgg gttacaagct ttaatattta aggaatgccc ttatgcttat
      601 tatattcatt attttgtgca tcagttgcaa ttagctttag ttgcaacatc taaagatatg
      661 gttgaggtgc acaaattttt caagaacatt aactttattg ttaatgtcat tgattcttct
      721 tctaagcgtc acgatcagtt acaagatgct caggttagtg aaattgcaca tttggctgaa
      781 attggagagc ttgagagtgg caaaggagca aatcaaatcc aaatgctacc tgaaattgct
      841 attaacgggt ctactccttc tcaaagaggt tatgctactt ttgcttttac cgaattattg
      901 tcatttgatt ttgtcattgt tatacatttg atgaagaaga taatgaaaac aatcgacaag
      961 ctttgtcaat ctttacaacg taaatctaaa gatatagtta atgctttaag ttaa
//
LOCUS       XM_071831430            1302 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139841202), mRNA.
ACCESSION   XM_071831430
VERSION     XM_071831430.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1302
                     /gene="LOC139841202"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841202"
     CDS             1..1302
                     /gene="LOC139841202"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071687531.1"
                     /db_xref="GeneID:139841202"
                     /translation="MASSSNYSAVDSVSSMSINHPVSPNVSGIDIGDSSDVLNASPVI
                     DEYNHILSSVEHRTPNGSRLWFPVVPDALKPVLILYAEFAGFDVKKASFNRLADGTIN
                     YVVFRCIRSGVPKRLAVNTLVNEPCVVSNHVDISKRNSSVISNHAEAVNNKSKRQSRK
                     GKEVVDNQVNDEHSSNKAPKFANRKSLTIKCGCEASLRCKYENGKIFIFKFFEGHNHK
                     LVSEADKNSLNKKRKMQYFDMNFVQDLASKSNIGSMLAHHINCDISGGYDMVGPTNVD
                     YKNFRRDLLRHIGETDAHIVIENLLRKKEVLPDFTCEYRCDEEGCLTGVFWADQLSKM
                     NYKEFGDTVSFDATYGTNRYNMRFVPITGIDNHKKLVIFGAALLSRETIDSYKWFIDC
                     FLKTFYNEPGLVTTDQDPAVLEAVDEKFKTAKHRLCWLCFV"
     misc_feature    472..>1287
                     /gene="LOC139841202"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggcttcct catccaatta ttctgcagtt gattcagttt cttcgatgag tattaatcat
       61 cctgtatctc ctaatgtttc tggaatcgat atcggtgatt catctgatgt tctgaatgct
      121 tcccctgtta ttgatgaata taatcatata ctgagttcag ttgagcatcg aactccaaat
      181 ggttctaggt tatggtttcc agtagttcct gatgcattaa agcctgtgtt gattctttat
      241 gctgaatttg ctggatttga tgtcaagaaa gcttcattta ataggttggc tgatggtact
      301 atcaattacg ttgtgttcag gtgtattagg tcgggtgttc ctaaaagatt agctgttaat
      361 actcttgtta atgaaccctg tgttgtttct aatcatgttg atatatcgaa aaggaattca
      421 agtgttattt ctaatcatgc agaggctgtg aacaataaat cgaaacgcca atctaggaaa
      481 ggtaaagaag ttgttgataa tcaggttaat gatgaacatt cttccaataa agctcctaaa
      541 tttgctaacc gtaagtcttt aacaattaag tgtggttgtg aggctagtct aaggtgtaaa
      601 tatgaaaatg gtaagatatt cattttcaag ttttttgagg ggcacaatca taagcttgtt
      661 tctgaagctg ataagaattc actgaacaag aagagaaaga tgcagtattt tgatatgaac
      721 tttgttcagg atcttgcttc gaagtctaat attggctcta tgcttgctca tcatattaac
      781 tgtgatatta gtggtggtta tgatatggtt ggtcctacta atgtagatta caaaaatttt
      841 aggcgtgatt tgctaaggca tattggtgaa actgatgctc acattgtcat tgaaaatctg
      901 cttaggaaga aggaggtttt acctgatttt acttgcgagt atagatgtga tgaagaaggt
      961 tgtttaactg gtgttttttg ggctgatcag ttgtctaaaa tgaattacaa agaatttggt
     1021 gacactgtgt catttgatgc aacatatggt accaataggt acaatatgag atttgttcct
     1081 atcactggta ttgataatca caagaagctt gttatttttg gtgctgcatt gctatcgcgt
     1141 gaaactattg attcgtacaa atggtttatt gactgttttc taaaaacttt ttataatgaa
     1201 cctggtttgg ttactactga tcaagaccct gcagtattgg aagcggtgga tgagaagttc
     1261 aaaactgcca aacacagatt atgttggtta tgttttgtat aa
//
LOCUS       XM_071831431            1800 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            EXO70H1-like (LOC139841203), mRNA.
ACCESSION   XM_071831431
VERSION     XM_071831431.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1800
                     /gene="LOC139841203"
                     /note="exocyst complex component EXO70H1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139841203"
     CDS             49..1800
                     /gene="LOC139841203"
                     /codon_start=1
                     /product="exocyst complex component EXO70H1-like"
                     /protein_id="XP_071687532.1"
                     /db_xref="GeneID:139841203"
                     /translation="MEEDLLYAEQIINKWDLNSPLYTKQDSLFTGDKYEARQFVKSVK
                     NLQSAMHYFVSESASSNKLIAAQKLMQVAMKRLEKEFYHILSTNKNVLNSESISVTNR
                     SSRARSNVSDDDDDDDDDDDATEEDDRVSIPRSSNSDGQRVSVSEIVMADLQLIADCM
                     ISSGYGKECVKIYKIIRKSIVDETLYNLGVERYSFNKITKLDWDTLEPKIKTWLHAEK
                     VAVESLFYSERILCDYVFSSSDKIRESCFSDICKDRATSLFEFPELVAKSKKSMERMF
                     RTLDMYNAISDQWNDIEMMFSFESTVIVRTQAVTSLGKLGDAVRAMLTDFETAIQKET
                     LKNPVNGGIHPLTRYVMNYLVFLSDYSPALNDIVADWPLNVESPLPESYFSSTSSDES
                     SAISSRFAWLVLVLLCKVDAGAELYKDVAQSYLFLVNNLNYVVSKVNSSNLGMLIGDD
                     WIEKHEQKVKQYATNYERIAWSKVIASLPDDPTVENLPIETARDCFRRFNLEFNELYR
                     KQSTWIISDSKFRDEIKISIAKKIVPSYRAFYENYRGLFRGGDSVVRFAPADLGNYLS
                     NLFHGNFFFFFFFLKSK"
     misc_feature    679..1749
                     /gene="LOC139841203"
                     /note="Exo70 exocyst complex subunit; Region: Exo70;
                     pfam03081"
                     /db_xref="CDD:460798"
ORIGIN      
        1 ccaagtccga ttacaacgcc tcatcgtcaa acattttccg cttcactcat ggaagaagat
       61 ttgctatacg ccgaacaaat catcaacaaa tgggacctta actctccgct ttacacaaaa
      121 caagactcgt tgttcaccgg agacaaatac gaagctcgac agtttgttaa atcggttaaa
      181 aacctgcaat ccgcaatgca ttatttcgtt tccgaaagtg cgagctcgaa taaactcatt
      241 gctgctcaaa agttgatgca agttgccatg aagaggttag aaaaggagtt ttaccacatt
      301 ttatcaacaa ataaaaacgt tctgaactca gaatcgattt cagttactaa ccgttcgtct
      361 agagcgagat ctaatgtttc tgatgatgat gatgatgatg atgatgatga tgatgctaca
      421 gaagaagatg atcgagtttc gattcctcgg tctagtaact ctgatggcca acgtgtttcg
      481 gtttccgaaa tcgttatggc ggatctacaa ctgattgcag attgtatgat ttcttctgga
      541 tatggaaaag aatgtgtaaa aatttacaaa atcatcagga aatcaattgt cgatgagacg
      601 ttgtataatc tcggtgtcga gagatacagt tttaacaaaa tcaccaaatt agattgggac
      661 acactggaac ctaaaatcaa gacgtggtta cacgctgaaa aagtcgcagt ggaatcgtta
      721 ttttatagcg aacgaatcct ctgcgactac gtgttttcat cgtctgataa gatccgagaa
      781 tcgtgcttct cggatatttg taaagatcgc gctacaagtt tattcgagtt tccagaactc
      841 gtagcgaaat cgaagaaatc gatggagaga atgtttcgta cattagatat gtacaacgcg
      901 atttcagatc aatggaacga catcgaaatg atgttttcgt tcgaatcaac ggtaattgtt
      961 cgaacgcaag cggttacatc gctcggaaaa ctaggtgatg cggttcgagc tatgttaaca
     1021 gatttcgaaa ccgcaataca aaaagaaacg ttgaagaatc cggttaacgg aggaattcat
     1081 ccgttaacgc gttacgttat gaattattta gtgttcttaa gcgattatag tccggcgttg
     1141 aatgatattg tagcggactg gccgttaaat gttgaatcgc ctttgccgga atcgtacttt
     1201 tcgtccacgt catcggatga atcgtcggcg atttcgtctc gattcgcgtg gctcgtgctt
     1261 gttttgttgt gtaaagttga cgccggagct gaactttata aagacgtagc gcaatcgtac
     1321 ttatttctcg taaataatct aaactacgtc gtttcgaagg ttaacagctc taatttaggg
     1381 atgctaatcg gagacgattg gatcgagaaa cacgagcaga aagtgaagca atacgcgaca
     1441 aattacgagc gaatagcgtg gagtaaagtg atcgcgtcgt tacctgatga tccaacggtc
     1501 gagaatttac cgatcgaaac ggctcgggat tgttttagga ggtttaatct agagtttaac
     1561 gagttgtaca gaaaacagtc gacgtggatt atatccgatt caaaatttcg agacgaaatc
     1621 aagatttcga ttgcgaagaa gattgtgccg agttatagag cgttttacga gaattatcga
     1681 ggtttgttta gaggtggtga ttcggttgtt agatttgcgc ctgctgattt ggggaattat
     1741 ttgtcgaatt tgtttcatgg aaattttttt tttttttttt tttttttgaa aagcaagtaa
//
LOCUS       XM_071831432            1056 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841204), mRNA.
ACCESSION   XM_071831432
VERSION     XM_071831432.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1056
                     /gene="LOC139841204"
                     /note="uncharacterized LOC139841204; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841204"
     CDS             1..1056
                     /gene="LOC139841204"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687533.1"
                     /db_xref="GeneID:139841204"
                     /translation="MKAISLNIRSFKVGGKVDVVGWVRRLIVKEKPSFMALQETKLHL
                     VDLNWIQSLWGSGNCNFIQKEMVGKSGGQLLIWDTIEFEAIDVINADFFMGVKGVWKS
                     SGVSFNIVNVYGPHDDNNKKSLWNSLHNLIDASDEAWLLCGDFNEVRNQNERLNCDFI
                     DHRARLFNDFITINSLIEIPLGGRNFTRVSDDGTKFSKIDCFLVNQSFVNLWKDLTAI
                     ALDRQHSDHCPIVLKDEDRNFGPKPFKIFDAWLDDEEIESVIRDAWVLPVENNARKDC
                     VFRNKLKNVKNALRTWSNGKYKNLDVEIENLRSVAMEFELQAENGPLIRPDLDLWRET
                     RKKWADKERTKELIDFK"
     misc_feature    10..699
                     /gene="LOC139841204"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,115..117,337..339,430..432,436..438,598..600,
                     676..681)
                     /gene="LOC139841204"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(115..117,676..678)
                     /gene="LOC139841204"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(337..339,436..438,679..681)
                     /gene="LOC139841204"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaaggcta tatctttaaa cattagaagt tttaaagtcg ggggaaaggt tgacgttgtt
       61 gggtgggtta ggcgcttaat tgttaaagaa aaaccttcct ttatggcgtt acaagaaaca
      121 aagttacacc ttgtggactt gaactggatt caatctttat gggggtcggg taattgtaat
      181 ttcatccaaa aggaaatggt gggaaaatcg ggtggccaat tgcttatttg ggatacaatt
      241 gaatttgaag cgatcgatgt gattaatgct gattttttca tgggcgttaa aggggtttgg
      301 aaaagttcgg gtgttagttt taatattgtt aacgtgtatg gtccgcacga tgacaataat
      361 aaaaagagtc tgtggaactc cctccacaac ttaattgatg ctagtgatga agcttggttg
      421 ctctgtggtg acttcaatga agtgaggaat caaaatgaaa gattgaattg tgatttcatt
      481 gatcatagag ctagactttt taatgatttt attacaataa atagtttgat cgaaatccct
      541 cttggaggcc gtaatttcac tcgggttagt gacgatggta ctaaatttag taaaattgat
      601 tgttttcttg ttaaccaaag ttttgtcaat ttgtggaaag atctcacggc tatagcgtta
      661 gataggcaac attctgatca ctgcccgatt gttttaaaag acgaagatag gaatttcgga
      721 cctaaaccgt tcaagatttt tgatgcttgg ttagatgatg aagaaattga gtcggttatt
      781 cgtgatgcat gggttttacc ggttgaaaat aatgctcgta aagattgtgt gtttcggaat
      841 aaactcaaaa atgtaaaaaa tgctttaaga acgtggagta atggcaaata caaaaactta
      901 gatgtcgaaa tcgaaaatct cagatcagtg gcaatggaat ttgaacttca agctgaaaat
      961 gggcctctta tcaggcctga tttagatcta tggagagaga cgcgaaaaaa atgggctgat
     1021 aaagaaagaa ctaaagagtt gatagacttt aaatga
//
LOCUS       XM_071831433            1155 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutelin type-D 1-like
            (LOC139841205), mRNA.
ACCESSION   XM_071831433
VERSION     XM_071831433.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139841205"
                     /note="glutelin type-D 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841205"
     CDS             85..1155
                     /gene="LOC139841205"
                     /codon_start=1
                     /product="glutelin type-D 1-like"
                     /protein_id="XP_071687534.1"
                     /db_xref="GeneID:139841205"
                     /translation="MELDLSPKLAKQLYGGAGGSYHAWCPNDLPMLKQGNIGAGKLFL
                     EKNGLALPRYSDSAKVAYVLQGSGVAGIVLPEKEEKVLAIKTGDAIALPFGVVTWWYN
                     KDDTELQVLFLGDTKTAHKPGSFTDFFLTGSNGIFTGFSTEFVCRAWDIDEATAKSLV
                     GNQKDNGIIKIDSSVKMPEPNKDHRNGMALNCLEAPLDVDIKGGGRVVVLNTKNLPLV
                     GEVGLGADLVRLDGNAMCSPGFSCDSALQVTYIVRGSGRAQIVGVDGKRVLETTVKAG
                     NLFIVPRFFVVSKISDNDGLEWFSIITTPNPIFTHMAGRTSVWKALSPEVLQASFNVT
                     PEVEKTFRSKRMNSEIFFAPTK"
     misc_feature    91..600
                     /gene="LOC139841205"
                     /note="11S legumin seed storage globulin, N-terminal cupin
                     domain; Region: cupin_11S_legumin_N; cd02242"
                     /db_xref="CDD:380369"
     misc_feature    order(91..108,154..156,175..180,184..189,193..195,
                     199..201,205..207,235..240,244..252,256..264,268..270,
                     274..276,292..294,298..309,316..324,328..333,337..339,
                     343..363,379..381,415..417,421..423,427..429,442..450,
                     454..456,460..462,490..507,514..516,523..537,547..549,
                     556..561,595..597)
                     /gene="LOC139841205"
                     /note="intramolecular domain interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:380369"
     misc_feature    order(184..186,235..240,244..252,301..303,307..309,
                     316..321,379..381,442..450,454..456,460..462,490..495,
                     499..507,514..516,523..537,547..549,556..561)
                     /gene="LOC139841205"
                     /note="hexamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:380369"
     misc_feature    676..1140
                     /gene="LOC139841205"
                     /note="11S legumin seed storage globulin, C-terminal cupin
                     domain; Region: cupin_11S_legumin_C; cd02243"
                     /db_xref="CDD:380370"
     misc_feature    order(676..693,700..702,709..711,715..720,730..732,
                     739..741,775..777,1000..1002,1006..1011,1132..1134)
                     /gene="LOC139841205"
                     /note="hexamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:380370"
     misc_feature    order(757..759,763..765,796..798,802..807,820..828,
                     832..834,838..840,856..858,895..900,913..930,946..948,
                     979..981,985..987)
                     /gene="LOC139841205"
                     /note="intramolecular domain interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:380370"
     misc_feature    order(787..789,796..798,802..804,817..822,853..855,
                     859..861,865..870,877..879,883..885,928..933,937..942,
                     946..948,952..954,991..993,1006..1011,1018..1023,
                     1036..1047,1051..1062,1069..1077,1081..1083,1093..1095,
                     1102..1110,1114..1116,1138..1140)
                     /gene="LOC139841205"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:380370"
ORIGIN      
        1 ctcattcaac atcattcgca atcaaaaaaa tccccaaatt tcttcattca atcattaaat
       61 aatcaatcaa tttcaatcaa acaaatggag ctcgatttat caccaaaact agctaagcaa
      121 ttgtacggag gtgctggtgg atcgtatcat gcatggtgcc ctaatgatct tccgatgctt
      181 aaacaaggta acatcggcgc cggaaaattg tttctcgaga agaacggttt agctctcccg
      241 aggtactctg attctgctaa agttgcttac gttcttcaag ggagtggagt tgctggaatc
      301 gttctgcctg agaaagaaga aaaggtccta gcaatcaaaa ctggtgatgc cattgctctc
      361 ccattcggtg ttgtcacatg gtggtacaac aaagatgata ccgagcttca agtccttttc
      421 ttgggtgaca ccaaaaccgc ccacaaacca ggctcgttca ccgacttctt cctaactggc
      481 tccaacggca tcttcaccgg tttctcaaca gaattcgtat gccgtgcttg ggacatagat
      541 gaagccaccg ctaaatcact cgttggcaac caaaaagaca acggaatcat taaaattgat
      601 tccagtgtta aaatgcctga acctaacaag gaccatagaa acgggatggc gttgaactgt
      661 ttggaagcac cgttggacgt tgacattaaa ggtggtggtc gagttgttgt gttgaacaca
      721 aagaacttgc ctttggttgg tgaagttggt ttgggtgctg atctggttcg gttagatggt
      781 aacgctatgt gctcgcctgg gttctcgtgt gactctgctc tacaagtgac gtacattgtt
      841 cgtggcagtg gacgtgcgca gatcgttggt gttgatggca aacgtgttct tgaaacgact
      901 gtaaaggctg ggaacctttt cattgttcct aggttctttg ttgtttcaaa gatctctgat
      961 aatgatggtt tggagtggtt ctccatcatc actactccaa acccgatatt cactcatatg
     1021 gctggaagga catctgtatg gaaggcgttg tctcctgaag tgttgcaggc ttctttcaat
     1081 gtgacccctg aagtggagaa gacgtttcgt tcaaagagga tgaacagtga gatcttcttt
     1141 gctccaacaa aatga
//
LOCUS       XM_071831434             801 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841206), mRNA.
ACCESSION   XM_071831434
VERSION     XM_071831434.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..801
                     /gene="LOC139841206"
                     /note="uncharacterized LOC139841206; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841206"
     CDS             1..801
                     /gene="LOC139841206"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687535.1"
                     /db_xref="GeneID:139841206"
                     /translation="MAKDDDSGPSIDATQISKLDFGDPLYLHASDISSTPLITFKLKG
                     TENYKSWAYAMELALQTKNKMGFITGDFKKNETDVVLGNQWEKCNAVVLSWILGSVSG
                     ELYNGQIYSKIAKNVWDELKETYDKVDGSVLFNLYQKINLITQNGTPVSEYYHKLNSL
                     WKQYDTFVQLPACALTASKEFNDHTNLIKLMQFLMGLDDVYLPIRSNILMRDPLPSVK
                     TAFSIISREESHRGTHLLEKKSTSETSAFYSSNFKPKIVNSGNNQICA"
     misc_feature    82..222
                     /gene="LOC139841206"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    277..693
                     /gene="LOC139841206"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggctaaag atgatgattc tggtccaagt attgatgcta ctcaaatcag taaattggac
       61 tttggtgacc cactttattt gcatgctagt gacattagta gtacaccctt gattactttc
      121 aaattaaagg gtacagaaaa ctataaatca tgggcttatg ctatggaatt agcacttcaa
      181 accaaaaata aaatgggttt tattactggt gattttaaaa agaatgaaac tgatgttgtt
      241 ttgggtaatc aatgggaaaa gtgtaatgct gttgttcttt cttggattct tggatctgtg
      301 tctggtgaat tatataatgg tcaaatctac tctaaaattg ctaagaatgt ctgggatgaa
      361 ttgaaggaga catatgataa agtagatggt tctgttcttt ttaatctata tcaaaagatt
      421 aatttaatta ctcagaatgg aactcctgtt tcagaatatt atcacaaatt aaattctcta
      481 tggaaacaat atgacacctt tgttcaatta cctgcttgtg ccctcacagc atctaaagaa
      541 ttcaatgatc atacaaactt gataaagcta atgcaatttc taatgggatt ggatgatgtt
      601 tatcttccta taagaagtaa tatcttaatg agggatcctt tgccctctgt taaaactgct
      661 ttctctatta tctctagaga agaatcacat agaggtacac atcttttaga aaagaagagc
      721 actagtgaaa catctgcttt ttattctagc aatttcaaac ctaaaattgt taactctggt
      781 aataatcaaa tatgtgctta a
//
LOCUS       XM_071831435            1146 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139841207), mRNA.
ACCESSION   XM_071831435
VERSION     XM_071831435.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1146
                     /gene="LOC139841207"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139841207"
     CDS             1..1146
                     /gene="LOC139841207"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071687536.1"
                     /db_xref="GeneID:139841207"
                     /translation="MGPKRNSNKGKAIMEYDDNSPRPRLVGSRVTFSKQIHVRVSPPS
                     TNVDNFKALFKVTRVTFNYICSIVQQYIISQDVEFKFLDETRMSIKDQIAIALRRLCS
                     IELTTEISDFFGTKPQTVLNVTWLFVVALGLQGEKHLSWSSNMGHTITSFQKIGGLIN
                     CCGAIATTNLKTYPHIKNDIAWLDPASNSSVLLQAVVGPDMRFLDIFMGVPGSMTSDT
                     LLKRSKFYKLVESKEILNGQEIELDEKATIREYVVGDSGFQLLPWLITPYNDVNLSNN
                     QIEFNKRHRATRSVARRALNKLKEVWGAIDGGKWIPGYDRIQRIILACCILHNIVIDR
                     MEGDSVLNESMMSSGFDLAFQVEKSVFPDDEEAVKMRDNLCLYLNED"
     misc_feature    559..987
                     /gene="LOC139841207"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 atgggcccca aaagaaactc aaacaaaggt aaggcaatta tggaatacga tgacaactct
       61 cctcgaccac gcttggttgg ttcaagggtt accttctcaa agcaaataca tgttcgtgta
      121 tctcctccat caacaaacgt ggacaatttt aaagcgcttt tcaaagtcac aagagtgaca
      181 tttaattaca tatgctccat cgtacaacaa tacataattt cccaagatgt agaatttaag
      241 tttctagacg aaacacggat gtcaataaaa gatcaaatag caatcgctct aagaaggcta
      301 tgttcgattg agttaactac tgagatatca gacttctttg gtacgaaacc acagaccgtg
      361 cttaacgtca cttggttgtt cgtggtggcg ttggggttac aaggtgagaa acatctttca
      421 tggtcatcta atatgggcca cacaattaca agcttccaaa aaattggagg cctgataaat
      481 tgttgcgggg ccatagctac tacaaatcta aaaacttacc cacatattaa gaatgatatt
      541 gcatggctag accccgcaag caacagtagt gtattgttgc aagctgtggt gggccccgat
      601 atgcggtttc ttgacatatt tatgggcgta ccggggagta tgactagtga cacccttctt
      661 aagcgatcca aattctacaa gttggtagaa tcaaaagaga tattgaatgg acaagaaatt
      721 gaactcgatg agaaagcaac tattagagag tacgtagtcg gagactcggg ttttcaacta
      781 ttaccatggt tgataactcc atacaacgat gtgaatttga gtaataacca aatcgagttt
      841 aacaagcgac atcgggcaac tagatcggtt gccagacgag cgcttaacaa attaaaagag
      901 gtttgggggg cgattgatgg tggcaagtgg atccctggat atgataggat acagagaatc
      961 atactcgcgt gttgtattct tcataatatc gttattgatc gtatggaagg agattcggtg
     1021 ctcaatgagt caatgatgtc aagtgggttc gatcttgcgt ttcaggtgga gaaaagtgtg
     1081 tttccagatg atgaagaggc tgtaaagatg agagataatc tttgtctcta cttaaacgaa
     1141 gattaa
//
LOCUS       XM_071831436            1146 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139841208), mRNA.
ACCESSION   XM_071831436
VERSION     XM_071831436.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1146
                     /gene="LOC139841208"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139841208"
     CDS             1..1146
                     /gene="LOC139841208"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071687537.1"
                     /db_xref="GeneID:139841208"
                     /translation="MGPKRNSNKGKAIMEYDDNSPRPRLVGSRVTFSKQIHVRVSPPS
                     TNVDNFKALFKVTRVTFNYICSIVQQYIISQDVEFKFLDETRMSIKDQIAIALRRLCS
                     IELTTEISDFFGTKPQTVLNVTWLFVVALGLQGEKHLSWSSNMGHTITSFQKIGGLIN
                     CCGAIATTNLKTYPHIKNDIAWLDPASNSSVLLQAVVGPDMRFLDIFMGVPGSMTSDT
                     LLKRSKFYKLVESKEILNGQEIELDEKATIREYVVGDSGFQLLPWLITPYNDVNLSNN
                     QIEFNKRHRATRSVARRALNKLKEVWGAIDGGKWIPGYDRIQRIILACCILHNIVIDR
                     MEGDSVLNESMMSSGFDLAFQVEKSVFPDDEEAVKMRDNLCLYLNED"
     misc_feature    559..987
                     /gene="LOC139841208"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 atgggcccca aaagaaactc aaacaaaggt aaggcaatta tggaatacga tgacaactct
       61 cctcgaccac gcttggttgg ttcaagggtt accttctcaa agcaaataca tgttcgtgta
      121 tctcctccat caacaaacgt ggacaatttt aaagcgcttt tcaaagtcac aagagtgaca
      181 tttaattaca tatgctccat cgtacaacaa tacataattt cccaagatgt agaatttaag
      241 tttctagacg aaacacggat gtcaataaaa gatcaaatag caatcgctct aagaaggcta
      301 tgttcgattg agttaactac tgagatatca gacttctttg gtacgaaacc acagaccgtg
      361 cttaacgtca cttggttgtt cgtggtggcg ttggggttac aaggtgagaa acatctttca
      421 tggtcatcta atatgggcca cacaattaca agcttccaaa aaattggagg cctgataaat
      481 tgttgcgggg ccatagctac tacaaatcta aaaacttacc cacatattaa gaatgatatt
      541 gcatggctag accccgcaag caacagtagt gtattgttgc aagctgtggt gggccccgat
      601 atgcggtttc ttgacatatt tatgggcgta ccggggagta tgactagtga cacccttctt
      661 aagcgatcca aattctacaa gttggtagaa tcaaaagaga tattgaatgg acaagaaatt
      721 gaactcgatg agaaagcaac tattagagag tacgtagtcg gagactcggg ttttcaacta
      781 ttaccatggt tgataactcc atacaacgat gtgaatttga gtaataacca aatcgagttt
      841 aacaagcgac atcgggcaac tagatcggtt gccagacgag cgcttaacaa attaaaagag
      901 gtttgggggg cgattgatgg tggcaagtgg atccctggat atgataggat acagagaatc
      961 atactcgcgt gttgtattct tcataatatc gttattgatc gtatggaagg agattcggtg
     1021 ctcaatgagt caatgatgtc aagtgggttc gatcttgcgt ttcaggtgga gaaaagtgtg
     1081 tttccagatg atgaagaggc tgtaaagatg agagataatc tttgtctcta cttaaacgaa
     1141 gattaa
//
LOCUS       XM_071831437            1224 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841209), mRNA.
ACCESSION   XM_071831437
VERSION     XM_071831437.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1224
                     /gene="LOC139841209"
                     /note="uncharacterized LOC139841209; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841209"
     CDS             1..1224
                     /gene="LOC139841209"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687538.1"
                     /db_xref="GeneID:139841209"
                     /translation="MVWELIIVKSRLWQNNSGVILIHCHLFILDYQLGQINKISGWEP
                     VIRKFTKRLSDWKTRMMLIGGRLTLVKSVLNSLPLYFFSLFRAPSCVIKKLESVRRNF
                     FWAGSGNDSNISWVKWEEVLLPYGEGGLNLGSLKRKNLALIGKWWWRFLTEPTTLWVK
                     VISSIYGPSGGFDLDRKYKLITCNSTWANIIKAGEHIDSIGVSFKDSFSTSIGDGCNT
                     RFWSDNWVGSSTLKNRFGRLFRLDQDPNAMVKDRINRNGCGLWEWICDPARQTRGQFQ
                     ELCDLIAVEVFVWRTRKKRIPSLIELDKRGIDLHTVRCLLCDDDVESVDHAILFYKHA
                     FDVWSKVFDWWGLNMAPSLSINEMFTASPSIAMSEVGSMVWQAMIWTCVYLIWWNRNQ
                     KVYNNKCWTPPVALC"
     misc_feature    <850..978
                     /gene="LOC139841209"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtgtggg agttaataat tgtgaagtcg agactatggc aaaacaattc gggtgtgatt
       61 ttgatacatt gccatttgtt tatcttggat taccaattgg gtcaaataaa taaaataagt
      121 ggttgggaac cggttatcag aaagttcaca aaaaggcttt ctgattggaa aacacgtatg
      181 atgttgattg gtggacgcct aactcttgtt aaatcggtgc taaatagtct tccgttgtac
      241 ttcttctcac tcttccgtgc cccgtcgtgc gtgatcaaaa aactcgagag cgtgagacgt
      301 aatttttttt gggcggggtc ggggaatgac tcaaacattt cttgggtcaa atgggaggag
      361 gttcttttac catacgggga gggcgggtta aacttgggct ctttaaaaag aaaaaatttg
      421 gctttgatcg gcaaatggtg gtggaggttt ttaaccgaac ccaccactct gtgggtcaaa
      481 gttatttcga gcatttatgg cccctcgggt gggtttgatt tggaccgaaa atataaactt
      541 attacatgta actctacttg ggcaaatatt attaaagcag gtgaacatat tgactctatt
      601 ggtgtttcgt ttaaagactc tttcagtaca tcaatcggcg acgggtgcaa cacaaggttc
      661 tggtcagaca attgggtggg ctcgtccacc ctcaaaaaca ggttcggaag actttttcgg
      721 cttgatcaag accctaatgc gatggttaaa gacagaatca accggaatgg ctgcggactg
      781 tgggaatgga tctgtgatcc tgcacgtcaa acgagaggtc agtttcaaga gctatgcgat
      841 ttgattgcgg tggaagtctt tgtttggcgt acgagaaaga aaagaatccc ttcacttata
      901 gaattggata agcgtggaat cgatttacac accgttcgtt gcctactttg tgacgacgat
      961 gtggaatcgg ttgatcacgc catcctattt tataagcacg cgtttgatgt ttggtctaaa
     1021 gtatttgatt ggtggggctt gaatatggct ccgtctctaa gtattaatga aatgttcacg
     1081 gcttctccaa gtattgcgat gtcggaagtt ggttctatgg tgtggcaagc tatgatttgg
     1141 acatgcgtgt atctcatatg gtggaatcgg aatcaaaaag tctacaacaa caaatgttgg
     1201 acacctccag ttgctctatg ttaa
//
LOCUS       XM_071831438             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841210), mRNA.
ACCESSION   XM_071831438
VERSION     XM_071831438.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139841210"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841210"
     CDS             1..567
                     /gene="LOC139841210"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687539.1"
                     /db_xref="GeneID:139841210"
                     /translation="MTGCKPVSTHVEQNLSVACEPSVNEKLVANITEYQKLVRRLIYI
                     TLSKPDISFVVHVLSQYMHSPLQSHSDLAFRVLSYLKGADGKGIQFVKDNGFSLNAYC
                     DSDWGDKNKEKNSEGCLMLAIAVELLVSIAWLCPLLLEPPLAKFRSRSEFRLVGFISR
                     SSTSISWVGLGPMDYCLLSIVRNDEFVA"
ORIGIN      
        1 atgactggtt gcaaacctgt tagtactcat gtggaacaaa atctttctgt tgcatgtgaa
       61 ccaagtgtta atgaaaaact tgttgctaat atcactgagt atcagaaatt agttagaagg
      121 ttaatttata ttactcttag caagcctgat atctcctttg ttgttcatgt tttgagtcag
      181 tatatgcact ctcctttaca gtctcattct gatttagctt ttagagtgct tagctattta
      241 aagggggctg atggtaaagg gattcagttt gttaaagata atggatttag tctcaatgct
      301 tattgtgatt ctgactgggg cgacaagaac aaggaaaaaa actcagaagg ttgccttatg
      361 ttagctatag cagttgagtt gcttgtatct attgcctggt tgtgcccttt gctgttagaa
      421 cctccattgg ctaagttccg ctcaagaagt gaatttcgat tggttgggtt catctcaagg
      481 agttcgacct caattagttg ggttgggttg ggtcctatgg actattgtct gttgagtata
      541 gttcgaaatg atgaatttgt tgcgtga
//
LOCUS       XM_071831439            1598 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841211), transcript variant X1, mRNA.
ACCESSION   XM_071831439
VERSION     XM_071831439.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1598
                     /gene="LOC139841211"
                     /note="uncharacterized LOC139841211; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841211"
     CDS             103..1341
                     /gene="LOC139841211"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071687540.1"
                     /db_xref="GeneID:139841211"
                     /translation="MFNLVTKLSTRVRCCSRSPSAVRLFSTTNKHHDQFNPNPVALQM
                     IDYAFSLSRSNKSDESYGQGLLVLEQCESNQHDANNKGLVLLAISTLLTERGKLVESI
                     EKLNTFNDLKVSSFPLRVAATEALSGLHLELEEDDTSSVIADVCLNDLDAIKLELGVG
                     FGSLDARARALKGLIELVRGNVDSSQSCFDGVKDNLGTGNDALSYAEFLHTTRDFSTA
                     KQLYQKVIKEIPETNNFTDPYNLAAGNMAWEDIRLAATCALGQLESHMGKFGDAEETL
                     TKALTMTEDRFGSKHPKIGIILTCIALMFRHKATMERSSSLMVQEGLYRRALELLKAP
                     QLETEAVEEAKVYKKDIIALARGGYAETLCVQQNRKATGEQMKSWAQAAWNNRRLSLA
                     DALDVSSNVPIIDVRISRAL"
ORIGIN      
        1 cgtagctagt tcgagttgca ccgtatcggc aacttgagtg ctgaagtctg aaaccctcga
       61 acctgagttt gctacctgcg acccgacacc aacgaaccaa cgatgtttaa cctcgtaacc
      121 aaactgtcaa cacgagtcag gtgttgttcc cgctcaccgt cggctgtccg attattctca
      181 accaccaaca aacaccatga ccagtttaac cctaatccgg ttgctcttca aatgatcgat
      241 tatgcatttt ctctttccag gtctaacaaa tcagatgaat catatggcca aggtttatta
      301 gtcctagaac aatgtgaatc aaatcaacat gatgctaata ataagggttt agttcttctt
      361 gcaatttcca cccttttaac tgaaagagga aagttggttg aatctattga gaagctgaat
      421 acatttaacg acttgaaagt ttcatctttt cctctaagag tggcggctac cgaagcactt
      481 tcaggacttc atttagaatt agaagaggat gatacttctt cagtgatagc agatgtctgc
      541 ttgaatgatt tagatgccat taaactggaa cttggagttg gatttgggtc attagatgct
      601 cgtgctagag cgttgaaagg cttgatagag cttgtgcggg gcaatgtaga ttcatcccaa
      661 tcttgttttg atggagttaa agataacttg ggcactggga atgatgcctt gtcgtatgct
      721 gagttcctgc acacaacacg ggatttctca actgcaaagc aattatatca gaaagtaata
      781 aaagaaatac ccgaaactaa taattttact gatccgtata acttggctgc tggtaatatg
      841 gcatgggagg acattcgttt ggccgccacc tgtgctttag gacaacttga gtcacacatg
      901 gggaaatttg gcgatgcaga agagaccctg actaaggcac taacaatgac tgaagatcgt
      961 tttggttcta aacatccaaa gattgggata atattaactt gcattgctct tatgtttcgg
     1021 cacaaagcaa caatggagcg ttctagttcc ctaatggtcc aagagggact atatagacga
     1081 gcactagaat tactaaaagc tcctcagttg gaaactgaag cagttgaaga agctaaagtg
     1141 tataaaaagg acataattgc ccttgcaaga ggtggttatg ctgaaacact ctgtgttcaa
     1201 cagaaccgta aagctacagg ggagcaaatg aaaagttggg cacaggctgc atggaataat
     1261 cgaagactct cgttagcaga tgcactcgac gtatcttcca acgtcccaat catagatgtt
     1321 cgaattagca gggcgctgta gattatttca tctgatgtct tacgttatag ttttgaccga
     1381 ggtaataaaa tcatactgca accgttgaaa gagtgagtgt aatctacagt ttgggcacat
     1441 gtggtgcatt gtatagcagg acgagcaata agatattaac ttgtttagta gaagatgaat
     1501 agttgcttgt gtaatctata aactcttgta ctgtacactt atacacatta gatctctaat
     1561 gactctggat tgggagaaag ctaaaaaaaa aaaaaaaa
//
LOCUS       XM_071831440            1594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841211), transcript variant X2, mRNA.
ACCESSION   XM_071831440
VERSION     XM_071831440.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1594
                     /gene="LOC139841211"
                     /note="uncharacterized LOC139841211; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841211"
     CDS             103..1338
                     /gene="LOC139841211"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071687541.1"
                     /db_xref="GeneID:139841211"
                     /translation="MFNLVTKLSTRVRCCSRSPSAVRLFSTTNKHHDQFNPNPVALQM
                     IDYAFSLSRSNKSDESYGQGLLVLEQCESNQHDANNKGLVLLAISTLLTERGKLVESI
                     EKLNTFNDLKVSSFPLRVAATEALSGLHLELEEDDTSSVIADVCLNDLDAIKLELGVG
                     FGSLDARARALKGLIELVRGNVDSSQSCFDGVKDNLGTGNDALSYAEFLHTTRDFSTA
                     KQLYQKVIKEIPETNNFTDPYNLAAGNMAWEDIRLAATCALGQLESHMGKFGDAEETL
                     TKALTMTEDRFGSKHPKIGIILTCIALMFRHKATMERSSSLMVQEGLYRRALELLKAP
                     QLETEVEEAKVYKKDIIALARGGYAETLCVQQNRKATGEQMKSWAQAAWNNRRLSLAD
                     ALDVSSNVPIIDVRISRAL"
ORIGIN      
        1 cgtagctagt tcgagttgca ccgtatcggc aacttgagtg ctgaagtctg aaaccctcga
       61 acctgagttt gctacctgcg acccgacacc aacgaaccaa cgatgtttaa cctcgtaacc
      121 aaactgtcaa cacgagtcag gtgttgttcc cgctcaccgt cggctgtccg attattctca
      181 accaccaaca aacaccatga ccagtttaac cctaatccgg ttgctcttca aatgatcgat
      241 tatgcatttt ctctttccag gtctaacaaa tcagatgaat catatggcca aggtttatta
      301 gtcctagaac aatgtgaatc aaatcaacat gatgctaata ataagggttt agttcttctt
      361 gcaatttcca cccttttaac tgaaagagga aagttggttg aatctattga gaagctgaat
      421 acatttaacg acttgaaagt ttcatctttt cctctaagag tggcggctac cgaagcactt
      481 tcaggacttc atttagaatt agaagaggat gatacttctt cagtgatagc agatgtctgc
      541 ttgaatgatt tagatgccat taaactggaa cttggagttg gatttgggtc attagatgct
      601 cgtgctagag cgttgaaagg cttgatagag cttgtgcggg gcaatgtaga ttcatcccaa
      661 tcttgttttg atggagttaa agataacttg ggcactggga atgatgcctt gtcgtatgct
      721 gagttcctgc acacaacacg ggatttctca actgcaaagc aattatatca gaaagtaata
      781 aaagaaatac ccgaaactaa taattttact gatccgtata acttggctgc tggtaatatg
      841 gcatgggagg acattcgttt ggccgccacc tgtgctttag gacaacttga gtcacacatg
      901 gggaaatttg gcgatgcaga agagaccctg actaaggcac taacaatgac tgaagatcgt
      961 tttggttcta aacatccaaa gattgggata atattaactt gcattgctct tatgtttcgg
     1021 cacaaagcaa caatggagcg ttctagttcc ctaatggtcc aagagggact atatagacga
     1081 gcactagaat tactaaaagc tcctcagttg gaaactgaag ttgaagaagc taaagtgtat
     1141 aaaaaggaca taattgccct tgcaagaggt ggttatgctg aaacactctg tgttcaacag
     1201 aaccgtaaag ctacagggga gcaaatgaaa agttgggcac aggctgcatg gaataatcga
     1261 agactctcgt tagcagatgc actcgacgta tcttccaacg tcccaatcat agatgttcga
     1321 attagcaggg cgctgtagat tatttcatct gatgtcttac gttatagttt tgaccgaggt
     1381 aataaaatca tactgcaacc gttgaaagag tgagtgtaat ctacagtttg ggcacatgtg
     1441 gtgcattgta tagcaggacg agcaataaga tattaacttg tttagtagaa gatgaatagt
     1501 tgcttgtgta atctataaac tcttgtactg tacacttata cacattagat ctctaatgac
     1561 tctggattgg gagaaagcta aaaaaaaaaa aaaa
//
LOCUS       XM_071831441             546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841212), mRNA.
ACCESSION   XM_071831441
VERSION     XM_071831441.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139841212"
                     /note="uncharacterized LOC139841212; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841212"
     CDS             1..546
                     /gene="LOC139841212"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687542.1"
                     /db_xref="GeneID:139841212"
                     /translation="MCTLHSGHKTVASKIKWLGYYWPLMYRDAAEGWIDELPNVLWAH
                     RTTPKGATNETPFSLVYGSEAVILAKINLPTMHILSFDESSNSKELRENLNLVKERRE
                     MAPIKEAINKQRIASYYNKRVQPLSFQLDDLVWQKNEARRAEDTGKLGSKWEGPYKVI
                     GISDTGAYRLASLDGNAIKRT"
ORIGIN      
        1 atgtgcactt tgcattcagg gcacaaaaca gtcgcgtcca aaataaagtg gctcggatac
       61 tattggccgt taatgtacag agatgccgca gagggttgga tagatgagct accaaatgtg
      121 ttgtgggcac accgtacaac cccaaaaggc gcaactaatg aaacaccttt cagtttggtg
      181 tatgggtccg aggcagtaat acttgcgaaa ataaatctgc caacgatgca catattatcc
      241 ttcgatgaaa gtagcaatag caaagaactg cgtgaaaatc taaatttagt taaagaacgc
      301 agggaaatgg cacctataaa agaagcaatc aacaagcaaa gaatcgcaag ctactataat
      361 aaacgcgtac aaccattatc gttccagctg gatgatttgg tatggcaaaa gaatgaagca
      421 agaagagctg aggatacggg taaactcgga tcaaaatggg aaggaccata taaggttatt
      481 ggcataagcg atacaggggc gtatcggtta gcaagtttag atggaaatgc aataaaacgc
      541 acctag
//
LOCUS       XM_071831442             429 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYB48-like (LOC139841213), mRNA.
ACCESSION   XM_071831442
VERSION     XM_071831442.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..429
                     /gene="LOC139841213"
                     /note="transcription factor MYB48-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139841213"
     CDS             1..429
                     /gene="LOC139841213"
                     /codon_start=1
                     /product="transcription factor MYB48-like"
                     /protein_id="XP_071687543.1"
                     /db_xref="GeneID:139841213"
                     /translation="MQMVKNYWRTRMRKKPQENKKCSSPSTSFSNTSSSSTCTNDPSV
                     DSMPMDETKERSFYDTGGIEMVLCGISRSNNNRNTMMKHDKFNNEELEGIYSMDEIWK
                     EIDMLENEGLKPVFDSYSNGVTTQIWDYSFSTSSFWMKDD"
ORIGIN      
        1 atgcagatgg tcaagaatta ctggagaact cgcatgagaa agaaaccaca agaaaacaaa
       61 aaatgttcat ctccatcaac atcattctca aatacctcat catcatcaac ttgtactaat
      121 gacccatccg ttgattcaat gcccatggat gagactaaag aacgaagctt ttacgatact
      181 ggtggaattg aaatggtttt atgtggaata agcagaagta acaataatag gaataccatg
      241 atgaaacatg ataaatttaa taacgaagaa ctagaaggga tttattctat ggatgagata
      301 tggaaagaaa tagatatgtt agaaaatgaa ggtcttaaac cggtctttga tagttatagt
      361 aatggtgtga caactcaaat atgggattac tcatttagta cgagtagttt ttggatgaag
      421 gatgattga
//
LOCUS       XM_071831443             438 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            ZAT11-like (LOC139841214), mRNA.
ACCESSION   XM_071831443
VERSION     XM_071831443.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..438
                     /gene="LOC139841214"
                     /note="zinc finger protein ZAT11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139841214"
     CDS             1..438
                     /gene="LOC139841214"
                     /codon_start=1
                     /product="zinc finger protein ZAT11-like"
                     /protein_id="XP_071687544.1"
                     /db_xref="GeneID:139841214"
                     /translation="MTVKRLLNSDTEIETMAMANCVMILSRVGKSSNTISKRDRLFHC
                     KTCNRPFQSFQELGGRCASHKRPKINDYVSLSPAKPKTHECSICGQEFAIGQALGGHM
                     RRHRDDVTKKVEVNKGSERSLFLDLDLNLTPNENGLKLWPIIT"
     misc_feature    124..201
                     /gene="LOC139841214"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
     misc_feature    247..321
                     /gene="LOC139841214"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 atgacagtga agagattgtt aaacagtgat actgaaatcg agaccatggc aatggccaac
       61 tgcgtaatga tattatctcg tgttggtaaa tcaagtaata caatttcaaa acgagaccga
      121 ttatttcatt gcaagacgtg taacaggcca tttcagtcgt ttcaagaact tggtggtcgt
      181 tgtgctagtc ataaacgacc aaaaataaat gattatgtaa gtttatcacc agcaaaacct
      241 aaaacgcacg agtgttcgat ttgtggacaa gagtttgcta taggacaagc gttaggtggt
      301 catatgagac gacatcgcga tgatgtaacg aaaaaggtgg aagtgaataa gggaagtgaa
      361 agaagtttgt ttttggattt agatttgaat ttgacgccta atgagaatgg cttgaagttg
      421 tggccgatta ttacttag
//
LOCUS       XM_071831444             456 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            ZAT11-like (LOC139841215), mRNA.
ACCESSION   XM_071831444
VERSION     XM_071831444.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..456
                     /gene="LOC139841215"
                     /note="zinc finger protein ZAT11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139841215"
     CDS             1..456
                     /gene="LOC139841215"
                     /codon_start=1
                     /product="zinc finger protein ZAT11-like"
                     /protein_id="XP_071687545.1"
                     /db_xref="GeneID:139841215"
                     /translation="MTVKRGWEDNTEVENLAMANCLMLLSKVGLSGGRVYNCKTCNKE
                     FKSFQALGGHRASHKRPKMMNCNEVESLPKPKIHECSICGLEFAIGQALGGHMRRHRD
                     GGNEKNIPVKVGRVTPMVPKKGLCLDLNLTPLENYRNLCSTSIKTVLAI"
     misc_feature    103..183
                     /gene="LOC139841215"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
     misc_feature    229..306
                     /gene="LOC139841215"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 atgactgtga agagaggttg ggaagacaat acagaagtcg aaaatctagc aatggcgaat
       61 tgtttgatgc tactatcaaa agtgggacta tcgggtggtc gagtttacaa ttgcaaaaca
      121 tgtaacaaag agtttaaatc atttcaagct ttaggtggtc atcgtgcaag tcataaacgt
      181 ccgaaaatga tgaattgtaa tgaggtcgaa tcactaccta aaccaaagat acacgagtgt
      241 tcgatttgtg ggttagagtt tgcgattgga caagcgttgg gtggtcatat gaggcgacat
      301 cgcgatggtg ggaatgagaa aaatattccg gtcaaggtgg gacgggttac gcccatggtc
      361 cccaaaaaag ggttgtgttt agatttgaac ttgacacctt tggagaatta taggaattta
      421 tgtagtacta gcattaaaac agttttagct atatga
//
LOCUS       XM_071831445             360 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841216), mRNA.
ACCESSION   XM_071831445
VERSION     XM_071831445.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..360
                     /gene="LOC139841216"
                     /note="uncharacterized LOC139841216; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841216"
     CDS             1..360
                     /gene="LOC139841216"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687546.1"
                     /db_xref="GeneID:139841216"
                     /translation="MYADPRRHPVTFNVGERVYLKVSPWKGVIRFGKRGKLAPRYVEP
                     FPISEILNDQTVVLDLPSELDGIHNTFNVCYLRKSKVDDETQIVPLVDLKVDLSNKLV
                     EEPIRVVDRKITKLRKK"
ORIGIN      
        1 atgtatgcag atccgcgtag acatccggta acttttaatg ttggtgagcg tgtgtatctt
       61 aaggtttctc cgtggaaagg ggttatcaga tttggtaaac gtggtaagct tgcgccaaga
      121 tatgttgaac cgtttccaat tagtgagatt ctgaatgacc agacagttgt gttagatctt
      181 ccttctgagt tagatggtat tcataatacc ttcaatgtgt gttatttgcg taagtctaaa
      241 gtcgatgatg agacacagat cgtaccgcta gtagatttga aagttgattt gagtaacaaa
      301 ctggttgagg aaccgattcg agtagtcgat agaaagatta ctaagttaag aaagaaataa
//
LOCUS       XM_071831446             690 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WUSCHEL-related homeobox
            2-like (LOC139841217), mRNA.
ACCESSION   XM_071831446
VERSION     XM_071831446.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..690
                     /gene="LOC139841217"
                     /note="WUSCHEL-related homeobox 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841217"
     CDS             1..690
                     /gene="LOC139841217"
                     /codon_start=1
                     /product="WUSCHEL-related homeobox 2-like"
                     /protein_id="XP_071687547.1"
                     /db_xref="GeneID:139841217"
                     /translation="MAGEVPAGAAAPCRWNPTKEQINMLENLYKQGMRTPTAEKIQDI
                     TTRLQTYGHIEGKNVFYWFQNHKARQRQKQKQDHMSCVHQYLHNYHHNFNHPLPPVVF
                     PVAHHQNVLYGQYYMPQNELGFYTQFPKMLMPNPATTKRRSHRTFKHKVSTGAGNLAG
                     GNIPIKSKIVNGQNLGHSETLDLFPLHPTGILQQKEVTSNNIDAIDLSACTSGSSECS
                     QDQLYFDFFSS"
     misc_feature    40..216
                     /gene="LOC139841217"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      
        1 atggccggag aagttcctgc cggagccgct gcaccgtgcc ggtggaaccc aactaaagaa
       61 caaataaata tgttggagaa tttgtataaa caaggtatga gaacaccaac tgctgaaaaa
      121 attcaagata taacaacaag gttacaaact tatggacata ttgaagggaa aaatgtattt
      181 tattggtttc aaaatcataa agcgagacaa agacaaaaac aaaaacaaga tcatatgtct
      241 tgtgttcatc aatatttgca caattatcat cacaacttca accaccccct gccgccggtg
      301 gtttttccgg tagctcatca tcaaaatgtt ttatatggcc aatattatat gccacaaaat
      361 gagctagggt tctacactca attcccaaag atgctaatgc ctaatcctgc caccaccaag
      421 agaagatcac accgaacttt caaacacaag gtctccactg gtgccggaaa tttagcagga
      481 ggtaatatcc cgatcaagtc aaagatagtc aacggtcaaa acttaggtca ttcagaaact
      541 ttggatcttt tcccacttca tcctactgga attttgcaac aaaaagaagt cacttcaaac
      601 aatatagatg ctattgattt gagtgcttgt acatcgggct cttcggaatg ttctcaagat
      661 caactctatt ttgacttttt ctctagttaa
//
LOCUS       XM_071831447            2673 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841218), mRNA.
ACCESSION   XM_071831447
VERSION     XM_071831447.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2673
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2673
                     /gene="LOC139841218"
                     /note="uncharacterized LOC139841218; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841218"
     CDS             1..2673
                     /gene="LOC139841218"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687548.1"
                     /db_xref="GeneID:139841218"
                     /translation="MGFGVGKESKVGWFKGLCRSVKPNFVMLQETKLHTVDLNWVRGL
                     RGNNNCNFIQKEMVRKSGGQLIIWDVDCFDMTNSFIHDHCIGIRVALERGKSDHCPII
                     LKNDVRNFRPKPIKVFDDWLDIEGVEECIKEVWAKEVGGGSRLDCRLRNKLKKAKVTL
                     KSKSSQKFGNLEDEIELFRSMANAFELRAKVGQLNDDERVEWLNVRKEWFQREKIKSN
                     MLKQKARVRWVLEGDENTSEEAYGLELAIEESEIVEAINDYGSEKAPGLDGFNLRFFK
                     KFWDVIKGDVINAISWFWEKGEFSKGCNASFVTLIPKKNDPITLGDYRPISLISSFYK
                     IVAKILSNQLQKVIPRLVGSEQSAFLRERYILDGVLVANETIEYLKSNRKKGLIFKVD
                     FEKAFDSLNWDFLLEVMRCMGFGERWCKWIHAGLKSASISILIDGSPTREFNLGRGVR
                     QGDPLSPFLFILAAEGLNILTKTAVSRGLFNGVEVGRDKVLLLHLQYADDTMFLGEWS
                     KVNALNFNKSCLYGVGVNAGEIESLVRRMGCQADKFPFIYLGLPIGAKMKKVKDWDPV
                     ILKIKKRLSEWKMRSMSFGGRLVLLKSVLNSLPLYYFMLFRAPPCVLKILESVRRSQI
                     EGLNIPFLSSFKRSIGDGSSTEFWNEVWCGSESFKNMFPRLYRLETNKNIVIFGRIKQ
                     WQQHDMGSGQSSGNSGPTGQHHFREQAISLGDYSEAEGEGDSAGQSNITRHSREGQPC
                     GGLDNSGSSLIRFEWEWSREPTGRTAGSGSHSAQETLRNNLMPKKIEDFIWRVLEKIL
                     PVRIELDKKGIDLHSIRCPICDDGLESIDHALFECKFSSDVWTRVLKWWNSNTNINSP
                     DLLRGKSSHNMSSLGSKIWQAVEWICAYFDMEES"
     misc_feature    913..1659
                     /gene="LOC139841218"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1174..1191,1351..1356,1489..1491,1495..1500,
                     1645..1650)
                     /gene="LOC139841218"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1174..1191,1351..1353,1495..1497)
                     /gene="LOC139841218"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1354..1356
                     /gene="LOC139841218"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <2335..2517
                     /gene="LOC139841218"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggttttg gggtgggaaa ggaaagtaaa gttggttggt ttaaagggtt gtgtcgtagt
       61 gtaaagccta attttgtgat gcttcaagaa acgaaattgc acactgtcga tctaaattgg
      121 gttcgtggtc tacggggtaa caataactgt aactttattc aaaaagagat ggtcaggaag
      181 tcagggggtc aactaatcat atgggatgtt gattgtttcg atatgactaa ctcatttatt
      241 catgatcatt gtattgggat tcgagttgca ttagaacgag ggaagtcaga ccattgcccg
      301 atcattttaa agaacgatgt cagaaacttt aggccgaaac cgattaaggt gtttgatgac
      361 tggctagata tcgaaggtgt cgaggaatgt ataaaagaag tttgggctaa agaagttggt
      421 ggtggctcac gtttagattg tcgtttaagg aataagctta aaaaagccaa agttacttta
      481 aagtcaaaga gttcacaaaa atttggcaat ttagaggatg agattgagtt atttagatcg
      541 atggctaatg cgtttgaact ccgggctaaa gtggggcaat taaatgatga cgaaagagtt
      601 gagtggttga atgttaggaa ggaatggttc caaagggaga aaatcaaaag caacatgttg
      661 aaacaaaagg cgagagttcg ttgggtactc gaaggtgatg agaatactag tgaagaggct
      721 tacgggctag agttagctat cgaggagtca gagattgtag aggcaattaa tgattacggt
      781 agcgaaaaag ccccgggtct ggatggtttc aacttaagat tttttaagaa gttttgggat
      841 gtgattaaag gtgatgtgat aaacgctatc tcgtggtttt gggaaaaggg agaattttcg
      901 aaaggttgta atgcctcgtt tgttaccttg attcctaaaa agaatgatcc catcacactt
      961 ggtgactata gacctataag cctaattagt agcttttata aaatagttgc caaaatcctt
     1021 tctaatcagt tacagaaggt aattcctagg ctagttggtt cggaacaaag tgcattctta
     1081 agagaaaggt acattcttga tggcgttctt gttgcaaacg aaactattga atacttgaaa
     1141 tcaaatagga agaaagggct tatatttaag gttgatttcg aaaaggcttt tgatagtttg
     1201 aattgggatt tcctcctaga agtcatgaga tgtatgggat ttggtgagag atggtgtaag
     1261 tggatccacg ctggtttgaa atcggctagt atctccattc ttatcgacgg atctccaacc
     1321 cgtgagttca atctcgggcg aggtgttcga caaggagatc cgctatctcc ctttcttttc
     1381 attcttgctg cggaaggtct taatatactc accaaaactg cggtatctag gggtctattt
     1441 aatggggtgg aagtaggtag agataaggtt ttacttttgc atttgcaata tgcagatgac
     1501 acgatgtttc ttggtgaatg gtctaaagtt aatgcactta atttcaacaa gagttgtctt
     1561 tatggagtgg gtgtcaatgc gggtgaaatt gagagtctag ttagacgaat gggatgccaa
     1621 gccgacaaat tcccatttat ttatttagga ttgcctatcg gtgccaaaat gaagaaagta
     1681 aaagattggg atccggtaat cttaaagatt aagaagagac tttcggaatg gaaaatgcgt
     1741 tcgatgtcct ttggtggacg gttggttctc ctaaaatcgg tgctcaatag tcttccattg
     1801 tattatttca tgctcttccg tgctccacct tgtgtgctta aaatccttga gagtgtgaga
     1861 cgttctcaaa ttgaaggcct aaatatccct ttcttaagtt cgttcaagag atcgatagga
     1921 gacggtagct ctacggaatt ttggaacgaa gtttggtgcg gttcggagag tttcaaaaac
     1981 atgtttccca ggttgtacag gcttgaaaca aacaagaata ttgtgatttt tgggcggata
     2041 aaacagtggc agcagcatga tatgggttcg ggtcagtcaa gtggcaattc gggtccaaca
     2101 ggtcagcacc attttcgtga acaggctatt agtttaggtg attattcgga ggcagagggc
     2161 gaaggagatt cagctggtca gtctaatatt actcgtcata gccgagaagg tcagccttgt
     2221 ggaggtttgg ataattcggg ttcgtcactt attcgcttcg aatgggaatg gtcaagagaa
     2281 cccacagggc gtacagcggg cagcgggtct cattcggcac aagagacatt aagaaacaat
     2341 ctcatgccaa agaaaatcga ggactttata tggagggtat tggaaaaaat attaccggtt
     2401 cggatcgaac ttgacaaaaa aggcattgac ttacatagta ttcggtgtcc catttgcgat
     2461 gacggtcttg aatcgattga tcatgcctta ttcgaatgca agttttcatc ggatgtgtgg
     2521 actcgtgttc tcaaatggtg gaactccaac accaacataa actctcccga tttacttcgg
     2581 ggaaaatctt ctcacaatat gtcctcactt ggctcaaaaa tttggcaagc cgtggagtgg
     2641 atatgcgctt atttcgatat ggaggaatcg taa
//
LOCUS       XM_071831448             435 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841219), mRNA.
ACCESSION   XM_071831448
VERSION     XM_071831448.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..435
                     /gene="LOC139841219"
                     /note="uncharacterized LOC139841219; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841219"
     CDS             1..435
                     /gene="LOC139841219"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687549.1"
                     /db_xref="GeneID:139841219"
                     /translation="MQVDVDDWIICGDFNEVRQKSERKNCEFIEYRAKMFNDFIDTSH
                     LIEIPMGGMKFTRISDDGLKYSKLNRFLVSESGLASWDGITVCTLDREYSDHCPIMLK
                     NSANDFGPRPTRIFNNWFEDGKSDEVIKATWGVNIRNPRADC"
     misc_feature    <16..303
                     /gene="LOC139841219"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgcaggttg acgttgacga ttggattatt tgtggtgatt ttaatgaagt gaggcaaaaa
       61 tcggaaagga aaaattgcga atttattgaa tacagggcta aaatgtttaa cgacttcatt
      121 gatacatctc accttattga aatccctatg gggggtatga aatttacaag gataagcgat
      181 gacggtctaa agtatagcaa acttaacagg ttcttagttt cagaatcagg gttagcttca
      241 tgggatggaa taactgtgtg tactcttgat agagaatact ctgatcattg ccccatcatg
      301 ttgaagaatt cggctaatga ctttggaccg agacccacta gaatttttaa caactggttc
      361 gaggatggta aaagtgatga ggtaataaaa gctacgtggg gagttaatat tagaaatccg
      421 agggctgact gttga
//
LOCUS       XM_071831449             639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 17.5 kDa class I heat shock
            protein-like (LOC139841220), mRNA.
ACCESSION   XM_071831449
VERSION     XM_071831449.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..639
                     /gene="LOC139841220"
                     /note="17.5 kDa class I heat shock protein-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 84 Proteins"
                     /db_xref="GeneID:139841220"
     CDS             1..639
                     /gene="LOC139841220"
                     /codon_start=1
                     /product="17.5 kDa class I heat shock protein-like"
                     /protein_id="XP_071687550.1"
                     /db_xref="GeneID:139841220"
                     /translation="MSIIPSFFRGSNVFDPFSLDAWDPQDVFLTRVDWKETPEAYVFK
                     ADLPGLKKEDVKVEMEDDRVLQISGERSRENDDKNDKWHRVERSSGKFLRRLWLPENA
                     KVDDVKAGMENGVLTVIVPKHEVKKPEVKAHYKKKALPGRHLGTIFRPRKSSRTTHRP
                     ECVVPKGSSRNVFPDGIFFPRRKVGPTLTFNACLRGRFFRTTLGDDISSQKK"
     misc_feature    91..366
                     /gene="LOC139841220"
                     /note="Alpha crystallin domain (ACD) found in
                     Saccharomyces cerevisiae (Sc) small heat shock protein
                     (Hsp)26 and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally active as...;
                     Region: ACD_ScHsp26_like; cd06472"
                     /db_xref="CDD:107229"
     misc_feature    order(91..111,130..132,136..138,142..147,211..213,
                     226..228,235..261,265..267,280..282,337..345)
                     /gene="LOC139841220"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:107229"
ORIGIN      
        1 atgtcgatca ttccaagctt ctttcgtgga tcaaatgtat ttgatccttt ctctttagac
       61 gcatgggacc cacaagatgt tttcttgacc cgagtcgact ggaaggaaac accagaagct
      121 tacgttttca aggcggatct tccgggacta aagaaggagg atgtgaaggt tgaaatggaa
      181 gatgataggg ttttacaaat aagtggggag agaagtcgag aaaatgacga taagaacgat
      241 aaatggcacc gtgttgagcg aagctcgggg aagtttttaa gaaggctttg gttgcccgaa
      301 aatgctaaag ttgatgatgt gaaagctgga atggagaatg gtgttttgac tgtgatagtg
      361 ccaaagcatg aggtgaagaa acctgaggtc aaagctcact acaagaaaaa agctcttccc
      421 ggacgacact tggggacgat ttttcgtcca agaaagtctt cccggacgac acatcgtccg
      481 gaatgcgtcg tcccgaaagg ttcgtcccgg aatgtttttc cggacggcat tttttttccc
      541 agacggaagg tggggcccac attgactttc aacgcttgcc ttcgtggacg cttttttcgg
      601 acgacacttg gggacgatat atcgtctcaa aagaaataa
//
LOCUS       XM_071831450             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841222), mRNA.
ACCESSION   XM_071831450
VERSION     XM_071831450.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139841222"
                     /note="uncharacterized LOC139841222; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841222"
     CDS             1..660
                     /gene="LOC139841222"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687551.1"
                     /db_xref="GeneID:139841222"
                     /translation="MFNDFIDKANLIEIPLGGMKFTRISDDGLKYSKLDRFLVSETCY
                     SSWEGITACTLDRDYSDHCPIVLKDSENDFGPKPTRIFNNWFEDEKSGDLIKEAWGTI
                     IRNSRADCVFRDKLKNVKVMLKEKCNPKFNSLNVEIDTLHKEISSWENLIGTRDLSDA
                     EIASWLESRKKWSLKDKEKAAILKKKARIKWVIDGDENSKYFHSCIKRRQIKITLGAS
                     I"
     misc_feature    <4..201
                     /gene="LOC139841222"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgttcaatg attttataga taaggcgaat cttattgaaa tcccactggg aggcatgaag
       61 tttacaagga tcagcgacga cggattaaaa tatagtaaac ttgacaggtt cttggtctca
      121 gaaacatgtt attcatcgtg ggagggaatt accgcgtgca ctcttgatag agattactct
      181 gaccactgcc ccatcgtttt gaaagactcg gaaaatgatt tcggcccgaa acctacaagg
      241 atctttaaca attggtttga ggacgagaaa agtggtgatt tgatcaaaga agcgtggggt
      301 actatcatcc gaaattcaag ggcggattgt gtatttcgtg acaagctaaa gaatgtcaaa
      361 gtgatgttga aggaaaagtg caacccaaaa ttcaatagtt taaacgttga aatcgatact
      421 cttcacaaag aaatttcctc atgggaaaac ctcattggta ctcgtgacct ctcggatgca
      481 gagattgctt cgtggttaga atcgaggaaa aagtggtctc ttaaagataa agaaaaagcg
      541 gccatattaa agaaaaaagc taggatcaaa tgggtaatcg atggggatga aaacagcaag
      601 tattttcact cgtgtattaa aagaaggcaa ataaaaataa cattaggggc atcaatttaa
//
LOCUS       XM_071831451             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841223), mRNA.
ACCESSION   XM_071831451
VERSION     XM_071831451.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139841223"
                     /note="uncharacterized LOC139841223; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841223"
     CDS             1..441
                     /gene="LOC139841223"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687552.1"
                     /db_xref="GeneID:139841223"
                     /translation="MPVLTELDKRGIDLDTVRCPLCDDDVETIDHSMIFCRHSMEIWE
                     RVYKWWGLGSVTNLSVNEAFQGKCNRTLSFVGSQIWQALEWTCGYLIWKNRNRKVLSN
                     SSWNGLGGLMEIQLLSFDWISSRCKHKNIDWLQWISNPLLYCID"
     misc_feature    <4..126
                     /gene="LOC139841223"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgccggtcc ttaccgaact cgataaaaga ggtattgact tggataccgt tcgatgccct
       61 ttatgtgatg atgacgtgga aacaattgat cactcgatga ttttttgtcg acattcgatg
      121 gagatttggg aaagggttta taaatggtgg ggtttaggtt cggtgacaaa tcttagtgtc
      181 aacgaggcct tccaaggtaa atgcaatcga acactttcat tcgtggggtc tcaaatttgg
      241 caagctctcg agtggacatg cggttacttg atttggaaaa accgcaatcg aaaggtgtta
      301 tcaaattcta gttggaacgg tctgggcggt ttaatggaaa tacaactact ctcattcgat
      361 tggatctcct cgcgttgcaa gcataaaaat attgattggc ttcaatggat ttctaatcct
      421 cttctctatt gtatagatta g
//
LOCUS       XM_071831452             984 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841224), mRNA.
ACCESSION   XM_071831452
VERSION     XM_071831452.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..984
                     /gene="LOC139841224"
                     /note="uncharacterized LOC139841224; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841224"
     CDS             1..984
                     /gene="LOC139841224"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687553.1"
                     /db_xref="GeneID:139841224"
                     /translation="MKKGKNSIQEGSFDSKSNNSSKTDLPDHVPRRAKNSKSRNTSSS
                     LFDKQNEFSENSVGLGEFAKQIGLDWEEGQPDVIALQETKCNMVDRNWVNMLWGSDGF
                     DFIQKGKIGNSGGSLLVSDTNEFSAKQAFIEEFYIAVRGKWKGRVETSYIVNIYVPHN
                     DTNKLKMWASLEIFLGVIDAAWILCGDFNEVRNESERKNCEFNERGAEWFNDFINHSN
                     LIEVPMGGKRFTRICDNGIKFNKLDRFLISEKVSIMWNELLVLALDQKLSEHYPIVLR
                     DRSIDFGPKPTKIFDKWLDVEGSDVIITNAWNKEVQGHRLDCKFRDKNEKY"
     misc_feature    205..750
                     /gene="LOC139841224"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgaagaagg gaaagaattc catccaggag ggctctttcg attctaaatc taataactcg
       61 agtaagactg atcttcctga ccatgtccca aggcgtgcaa aaaattcaaa atccagaaac
      121 acctcctcaa gtttattcga caaacagaat gaattttcag agaacagtgt gggattaggt
      181 gaattcgcaa agcaaatcgg tctcgattgg gaagaagggc agccggatgt cattgcacta
      241 caagaaacta aatgcaatat ggttgatagg aattgggtta acatgttatg ggggtcggat
      301 gggtttgatt ttattcaaaa gggaaagata ggcaattcgg gcgggtcact tttagtttcg
      361 gacaccaatg agttttcagc gaaacaagcg tttattgagg aattttacat tgcggttaga
      421 gggaaatgga aagggcgagt cgagacttct tatattgtta atatttacgt gcctcacaat
      481 gatactaata aattaaaaat gtgggcgagt cttgaaattt ttttaggtgt tatcgatgcg
      541 gcttggatcc tttgtgggga ttttaatgaa gttcgtaatg aatcggaaag aaaaaattgt
      601 gagtttaatg aaagaggggc ggagtggttt aatgacttta ttaatcactc caacttaatc
      661 gaggttccaa tgggaggtaa gaggtttacg cggatttgtg acaatggaat caagtttaac
      721 aaacttgaca gattcttaat ttcggaaaaa gtaagcatta tgtggaatga attattggtc
      781 ctagctttag atcaaaaatt gtcggaacat tatccgatag tccttcgaga tagatcaata
      841 gacttcggcc cgaaacctac taaaatcttt gacaaatggt tagatgtgga agggtctgat
      901 gtgatcatta ccaatgcgtg gaataaagag gtacaagggc ataggttaga ttgcaaattt
      961 agagacaaaa atgaaaaata ttaa
//
LOCUS       XM_071831453             594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841225), mRNA.
ACCESSION   XM_071831453
VERSION     XM_071831453.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..594
                     /gene="LOC139841225"
                     /note="uncharacterized LOC139841225; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841225"
     CDS             1..594
                     /gene="LOC139841225"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687554.1"
                     /db_xref="GeneID:139841225"
                     /translation="MGDPGPFLIPCNVNGSEMLTSLADSGASINYFMPYSVYKRLGLG
                     DLSPTTMGVKLIDQSINSSMGIAEDLIVKVGDMEFPIDFFIVDIKEDPVVPLVLGRPF
                     LASACSFFDFRTGKLSLRDKGKCMSIKTKRVKKPSMPMTRPQVVASMHCVTSIRQVGS
                     PIKGSGRLTKGIQGKAKTQNDVVDKSMRKLFGRVNRV"
     misc_feature    25..312
                     /gene="LOC139841225"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(70..72,76..78,82..84,157..165,289..291)
                     /gene="LOC139841225"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    70..78
                     /gene="LOC139841225"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    70..72
                     /gene="LOC139841225"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(157..168,178..189)
                     /gene="LOC139841225"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgggtgatc ccggaccttt ccttatccca tgcaatgtaa acggttcaga gatgctcaca
       61 tctttagccg attcgggagc aagtatcaac tacttcatgc cctattctgt ttacaaaagg
      121 ctaggcctag gtgatctttc acctactaca atgggagtta aattaattga tcaatcaatt
      181 aactctagta tggggatcgc cgaagactta attgttaaag tgggggacat ggaatttccc
      241 attgactttt ttatagttga tataaaggaa gacccggttg taccccttgt tttgggaagg
      301 ccatttttgg catccgcgtg ctctttcttc gactttagga ccgggaaatt gagtcttcgg
      361 gataaaggga aatgcatgag cataaaaacc aaacgtgtta aaaaaccatc aatgcccatg
      421 accagaccac aagttgttgc tagcatgcac tgcgttacaa gcataaggca agtaggttca
      481 ccaattaaag gtagtgggag attaaccaag ggaattcaag gtaaagccaa aactcaaaac
      541 gacgttgttg acaagtctat gcgaaagtta tttgggcggg tgaatcgggt gtag
//
LOCUS       XM_071831454             489 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841226), mRNA.
ACCESSION   XM_071831454
VERSION     XM_071831454.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..489
                     /gene="LOC139841226"
                     /note="uncharacterized LOC139841226; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841226"
     CDS             1..489
                     /gene="LOC139841226"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687555.1"
                     /db_xref="GeneID:139841226"
                     /translation="MGDSGPFLIPCKVNGSEMFTSLADSGASINFMPYSIYQRLGLGN
                     LLPTKMGVNLIDQSISPSVGIAEDPIVKVGEMEFPTDFVIVDIKEDPVVPLVLGRLFL
                     ATTDSFFDFRTGKLTLRDKDKCMNIRSKYTKLPPTPITTPQVVASVERTTSTTLVGSP
                     QS"
     misc_feature    25..309
                     /gene="LOC139841226"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(70..72,76..78,82..84,154..162,286..288)
                     /gene="LOC139841226"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    70..78
                     /gene="LOC139841226"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    70..72
                     /gene="LOC139841226"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(154..165,175..186)
                     /gene="LOC139841226"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgggcgatt ctgggccttt cctcatccca tgcaaagtga acgggtcgga gatgtttaca
       61 tctttagccg actcgggtgc tagtatcaac tttatgccct attctattta tcaaaggttg
      121 ggcctaggta accttttgcc cactaaaatg ggagtaaact taattgacca atccattagc
      181 cctagtgtgg ggatcgccga agacccaatt gtgaaagtag gggaaatgga atttccgacc
      241 gattttgtga ttgttgatat aaaggaagac ccagttgtgc cccttgtttt gggaagacta
      301 tttttggcaa ccacggattc tttctttgac tttagaaccg ggaagttaac tctaagagac
      361 aaagacaagt gcatgaacat tcgtagcaaa tatactaaat tgccaccaac gcccataacc
      421 acaccacaag ttgttgctag tgtggaacgc actacaagca caactctagt tggttcacca
      481 cagagttga
//
LOCUS       XM_071831455             789 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841227), mRNA.
ACCESSION   XM_071831455
VERSION     XM_071831455.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..789
                     /gene="LOC139841227"
                     /note="uncharacterized LOC139841227; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139841227"
     CDS             1..789
                     /gene="LOC139841227"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687556.1"
                     /db_xref="GeneID:139841227"
                     /translation="MGLVRMPANNRLHSSAALQTHGIWQSAIRYDPHAPNKEDSKKSA
                     QPQSSNAEPKGENAYARFQGLLALARITGSNADEARGSCKKCGCVGHLTFQCRNFLSI
                     KEDKDKDPEAIQAYVNAGLAKLKGNGKRINESESSDSDYDSEIERAIALKYGKKLSSK
                     SKSIRKKKDDDSDELDYEKKKRMGRSKKRRGRKKTKEKRRRKDESSDEDRSRRRKSRK
                     EKRRRRSHRYSDYSDGSENDIVRRHRRKSNKSQRRSDGITLYSN"
     misc_feature    235..>294
                     /gene="LOC139841227"
                     /note="Zinc knuckle; Region: zf-CCHC_3; pfam13917"
                     /db_xref="CDD:404753"
ORIGIN      
        1 atgggcttgg ttcgtatgcc agctaacaat cggttgcaca gtagtgctgc cttgcaaact
       61 catggtatat ggcaaagtgc gattcgatat gaccctcatg cccctaacaa agaagatagc
      121 aaaaaatccg cccagcctca atcttcaaac gcagaaccca agggagaaaa cgcttacgct
      181 agatttcaag ggttgcttgc acttgcacga attacagggt ccaatgctga cgaggcacgt
      241 gggtcctgca agaaatgtgg ttgtgtgggt catttgacat ttcagtgtag aaatttcttg
      301 agcatcaaag aagataaaga caaggatcca gaagctattc aggcttatgt taatgcaggg
      361 ttagcaaaac ttaaagggaa cgggaagaga ataaatgaga gtgagagttc ggattcggat
      421 tatgattcgg agattgaacg ggctattgct ttaaaatatg ggaagaagct gagtagtaaa
      481 tcgaagtcta taagaaagaa gaaagatgat gattcagatg agttggatta cgagaagaag
      541 aaaagaatgg gtaggtctaa gaaacgaaga ggtaggaaaa agacgaaaga aaaaaggagg
      601 agaaaggatg agtcatcgga tgaggatcga tcgcgtcgga ggaagagtag gaaggagaaa
      661 aggaggagga ggagtcatag gtattcggat tattcggatg gttctgaaaa cgacatagtt
      721 agaagacata ggaggaagag taataagagt caacgaaggt ctgatggtat tacattatat
      781 agcaattaa
//
LOCUS       XM_071831456            2700 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides PKS-NRPS hybrid synthetase
            cheA-like (LOC139841228), mRNA.
ACCESSION   XM_071831456
VERSION     XM_071831456.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2700
                     /gene="LOC139841228"
                     /note="PKS-NRPS hybrid synthetase cheA-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841228"
     CDS             1..2700
                     /gene="LOC139841228"
                     /codon_start=1
                     /product="PKS-NRPS hybrid synthetase cheA-like"
                     /protein_id="XP_071687557.1"
                     /db_xref="GeneID:139841228"
                     /translation="MAADSGRVVVVVVVVVVRRRQMSIEGDEFFMRTPEFATNQMFGS
                     REELIDWIQTLAKSLGIVVVMRRSNKRASGFVYKSTLICDRGREYTGLNSSRATGTKR
                     INCPFELEGLYFEQYNSWMLKVICDEHNHQPIRYMEGHPYAQRLSDDEFSLVAELFRM
                     NMMPRDILSVIKQHYPNNVSSLSTIYNAIKKIRMMETGGKSPMQVLMSILLMSILHSS
                     GYTYYYTTGTSNELENLFFIHPISFNIWRAYPHVLIIDATYKTNRYKMPFVEIVGVTS
                     TSKTFCIAFAFIHDETTVRYEWVLNCLKLTLGECMLPRVRVTDREMALINACREVFPD
                     AARLLCRWHIRHNIIDKWKRSFKRKDDWTAFYDLWTLLEGSSTLKTYTGYYKQLESFL
                     KRLNLTRILEYLNKTWLDKFKKMFVSVWIDQHLLFENTTTNRVESQHAKLKRYLKSSN
                     SSIDRFVCCIDRIVQSQDTAIKRSLQKSISVRIHNYNLQCFTHLLGNISHKALKKMLE
                     DRERFKDHNDDCDCRLRTSCGLPCACEILTKLDISPSIFKPDDDVRCDSELRQFAENF
                     NNQSKAVKRSLLQKLKDIIYPGKTDTQEPRVKKNTRGRPPMKKNQQKRHADYVHQDSR
                     RYSCSDMPNFIVRDSIKDPARDSSYSINLNEEPEIDLNEEPEIDLNEKPEIDLNEVPY
                     EFSSSYIFNQNEMPRMHNSYMFNGIPKLFHQYIKNIYNVEGDGNCGYRAFAVSLMGNE
                     RYYENIRYEMKEELRNNLEFYKRMFDREIKSLKASLCYVGSPCPPEYWMMMPYAGILI
                     ANRFGVIVYSLSMSESSTIFPFWMGPEEFQEIRVLTIALVNCENHYVTVELQGDYPMP
                     PVTGYFHDRYINNSAARWKEVYKERFEQFIRFNRREAGFVDLK"
     misc_feature    124..396
                     /gene="LOC139841228"
                     /note="Transcription factor AFT; Region: AFT; pfam08731"
                     /db_xref="CDD:400877"
     misc_feature    <694..>1401
                     /gene="LOC139841228"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
     misc_feature    754..1041
                     /gene="LOC139841228"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    2152..2532
                     /gene="LOC139841228"
                     /note="OTU (ovarian tumor) domain family; Region: OTU;
                     cd22744"
                     /db_xref="CDD:438581"
     misc_feature    order(2179..2181,2302..2304,2311..2313,2332..2343,
                     2449..2451,2464..2466,2509..2511,2524..2532)
                     /gene="LOC139841228"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:438581"
ORIGIN      
        1 atggcggcgg atagtggtag agtggtggtg gtggtggtgg tggtggtggt gaggcggcgt
       61 cagatgtcga ttgaaggaga cgagtttttt atgaggacac ccgaatttgc cactaatcag
      121 atgttcggtt ctcgtgaaga attgatagat tggatacaaa ctttggctaa atcgcttggt
      181 attgtcgttg tcatgagaag gtctaataaa agagcatcag gttttgtgta taagagtaca
      241 ctaatatgtg accgtggtag ggaatataca gggttaaatt caagtagagc taccgggaca
      301 aaaagaatta attgtccctt tgaattagaa ggattatatt ttgaacaata taattcatgg
      361 atgttaaagg tgatatgtga tgagcataac catcaaccaa tacggtatat ggaaggtcat
      421 ccatatgcac aaagactttc cgatgatgaa tttagtttgg ttgcggagtt atttaggatg
      481 aatatgatgc cacgagatat tttatcagtt attaagcaac attatccaaa taacgtgtct
      541 tcgttgagta ctatttacaa cgcaatcaaa aaaattcgca tgatggagac aggaggcaaa
      601 tctcccatgc aagttcttat gtctattctt cttatgtcta ttcttcattc tagtggttat
      661 acttattact ataccacagg tacatcaaat gagttagaaa atttattctt cattcatcca
      721 atatcattca atatttggcg tgcatatcca cacgtgttga tcatagacgc gacgtacaaa
      781 actaaccgtt ataagatgcc tttcgttgaa attgttggtg taacttcaac cagcaaaaca
      841 ttttgtatag cttttgcctt cattcatgat gaaacgacgg ttagatacga atgggtcttg
      901 aactgtttaa agttaaccct aggcgagtgc atgctcccac gtgttagagt tacagataga
      961 gagatggcat taataaatgc atgcagagaa gtttttccgg atgctgcccg attactttgt
     1021 agatggcaca ttcgtcacaa tataattgat aagtggaagc gatcttttaa aagaaaagat
     1081 gattggactg cattttatga cttatggacg ttactcgagg gttcttcaac gctgaaaact
     1141 tacaccggat attacaagca acttgagtca tttctaaaac gcttaaatct tacacgtatt
     1201 ttagaatatt tgaataaaac ttggctagac aaattcaaga aaatgtttgt atctgtctgg
     1261 attgatcaac atctcctctt tgaaaatacg acaaccaaca gagttgagag tcagcacgcc
     1321 aaattaaaaa gatatttgaa gagttcaaac tcgagtatag atagatttgt atgttgtatt
     1381 gacagaattg tgcagtcgca agatacagct atcaaacgta gtttgcaaaa gagcataagt
     1441 gttcgcattc ataactataa cctacagtgc ttcacacatt tgctcggtaa tatttcacat
     1501 aaagctttga aaaaaatgct tgaagaccgt gaacgattta aggatcacaa tgatgattgt
     1561 gattgtcgac ttcggacctc ttgtggactg ccatgtgctt gcgaaatttt aacgaagctg
     1621 gatatttcac catcaatttt taaaccagat gatgatgtta ggtgtgatag tgaactccgg
     1681 cagtttgctg aaaactttaa caaccaatca aaagctgtaa aaagaagttt gttgcaaaag
     1741 ttaaaggata taatctatcc aggtaaaaca gacactcaag aacctcgagt taaaaagaat
     1801 acacgtggcc gaccgccaat gaagaaaaac caacaaaaga ggcatgccga ttatgttcac
     1861 caagattctc gtagatacag ttgttcagac atgcccaatt ttattgtgcg agattcgatt
     1921 aaggatccag caagggatag ttcgtacagt ataaacttaa acgaggaacc agagattgat
     1981 ttaaatgagg aaccggagat agatttaaat gagaaaccag agatagactt aaacgaggtt
     2041 ccgtatgagt tctcgagttc gtacatcttc aaccagaatg aaatgccaag aatgcataat
     2101 tcttatatgt tcaatggtat tccaaaatta tttcaccagt acataaagaa tatatataat
     2161 gttgaaggtg atggaaattg tggatatcgg gcattcgccg tttccctcat gggaaatgaa
     2221 cgatattatg agaatattcg gtatgaaatg aaagaagagc tgcggaataa cctcgaattc
     2281 tacaaaagaa tgtttgacag agaaataaag tcgttgaaag cttctctatg ttacgttgga
     2341 tctccttgtc cacctgaata ttggatgatg atgccctatg caggtatact gatagccaat
     2401 aggtttggtg taatcgtcta ctcattgagc atgtcagaaa gttcaaccat tttcccgttt
     2461 tggatgggtc cagaagagtt tcaagaaata agagttctta caattgccct agtaaattgt
     2521 gagaatcatt atgttacggt ggaattacaa ggagattacc ctatgcctcc ggttacaggt
     2581 tactttcatg atcgctatat taacaattct gcagctagat ggaaagaagt ttataaggag
     2641 cgctttgaac aatttatccg atttaatcgt cgtgaagctg gttttgtcga tttaaaatga
//
LOCUS       XM_071831457             432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841229), mRNA.
ACCESSION   XM_071831457
VERSION     XM_071831457.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..432
                     /gene="LOC139841229"
                     /note="uncharacterized LOC139841229; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841229"
     CDS             1..432
                     /gene="LOC139841229"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687558.1"
                     /db_xref="GeneID:139841229"
                     /translation="MLASNIDLEFDWVKVVWNKYVPSKIAFFHWLAIHGGVPVKEVLH
                     SRHCLPNGLDVTPSSILEFSYDWSNGMGIKASRFWSLIGPASIWAIWIARNDALFNGI
                     YTCWAGVIKCIKFKVFQWLVNAKICESYQFYSWESQPWLLI"
     misc_feature    25..>141
                     /gene="LOC139841229"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcttgcct cgaatatcga tttagagttt gattgggtaa aagttgtgtg gaataaatat
       61 gttccatcaa agattgcttt ttttcattgg cttgcaattc atggtggtgt cccggtgaaa
      121 gaagttcttc attctagaca ttgtttgcca aacgggttag acgtgactcc ttcctcgatt
      181 ttggagttct catatgattg gagtaatggt atgggtatta aagcatcgag gttttggagt
      241 ttaattggcc cagcttctat atgggcaatt tggatcgcaa ggaacgatgc cttgtttaat
      301 ggaatatata cttgttgggc cggagtaatc aaatgtatta agttcaaggt atttcagtgg
      361 ctagttaatg ccaagatttg tgaaagctat caattctaca gttgggaaag tcaaccgtgg
      421 cttctgatat aa
//
LOCUS       XM_071831458            1347 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841230), mRNA.
ACCESSION   XM_071831458
VERSION     XM_071831458.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1347
                     /gene="LOC139841230"
                     /note="uncharacterized LOC139841230; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841230"
     CDS             1..1347
                     /gene="LOC139841230"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687559.1"
                     /db_xref="GeneID:139841230"
                     /translation="MTGELEVIHERTQLKPLQHEIQNLYTDGASCIEGAGAGLVLTSP
                     SGEEHTYPLHFNFDVTNNEAEYEALLAGLNMAHKMNVLQLRAYVDSQFVANQFNGSFE
                     AHELSMQKYLKLVQEAAERFEFFELTQVSRSQNKKADALTIEEVQPNWMDPIVNYLSN
                     NTLPEGKKKARLVRERSPMYVIENDMLYRKSYLRPLMRCVGPAEAATIIEEVHSGSCA
                     LHSGYKTFATFSIPRELVSDNGAQIAKDPFLSWCVELNIIQKFTSVAHSQANGLCEVT
                     NRYIVSGIRKRLNEKRNGWVDELSNVLWAHRTTFKKSTGETPFSLVYGSEAMIPAKVF
                     VPMHRVANFDESANANDICENLNFIEERRLMAAIREANNKQQIAKYYNKKVRALAFDV
                     DEWVLQNNEASRAEKLGNLGPNWEGPYQIVGINAAGSYKLQDIEGVTYLMRGMLLC"
     misc_feature    70..423
                     /gene="LOC139841230"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(79..90,178..186,193..195,265..267,385..387)
                     /gene="LOC139841230"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgacgggtg aacttgaagt aatccatgaa agaacacaac taaagcctct tcaacatgaa
       61 atccagaact tgtatacaga tggagcatcg tgtattgaag gtgcgggtgc aggattagta
      121 ttaacaagcc caagtggtga agagcataca tacccgttgc attttaattt tgatgtaaca
      181 aataatgagg ctgaatatga agcactgctc gcgggattaa acatggcaca caaaatgaat
      241 gttttacagt tacgcgcata tgtagattca cagtttgtag caaatcaatt taatggctca
      301 tttgaagctc acgagttgtc catgcaaaaa tacttgaagc tagtgcagga agctgcggag
      361 agatttgaat ttttcgaatt aacacaagta tcaagaagtc aaaataaaaa ggcggacgcg
      421 ctgactatag aagaagttca accaaattgg atggatccta tagtgaatta tttgagcaac
      481 aatacattac cagaaggcaa gaaaaaagct cgattggtgc gagaaagatc ccctatgtat
      541 gtgattgaaa acgatatgtt atatcgcaaa tcatatttga gaccattaat gaggtgcgtg
      601 ggacccgcag aagctgcaac aattattgag gaggtgcata gtggatcttg tgctcttcat
      661 tcaggctaca aaacttttgc gacatttagc atcccacgag aacttgtaag tgataatggg
      721 gcgcagattg caaaggaccc atttctaagc tggtgtgtgg aattgaatat aatccaaaaa
      781 ttcacatcag ttgcacattc gcaagcaaat gggctatgcg aagtaactaa ccgctatatt
      841 gtcagcggaa ttcgaaagcg tttgaatgaa aagcgaaatg gatgggttga tgaactatca
      901 aatgtgttat gggctcatcg cacaactttc aagaaaagta caggcgaaac accttttagc
      961 cttgtgtatg gttcagaggc aatgattccc gcaaaagtct ttgtcccgat gcatagagtt
     1021 gctaactttg atgaaagtgc gaatgcaaat gacatttgtg aaaacttaaa tttcattgag
     1081 gaacgcaggc ttatggccgc aataagagag gcaaacaata agcaacaaat tgccaagtat
     1141 tacaacaaga aagtgcgcgc gttagccttt gatgttgacg agtgggtctt gcaaaataat
     1201 gaagcaagtc gtgctgaaaa acttggaaat ttgggaccta attgggaggg accataccaa
     1261 atagtgggaa tcaatgcggc aggctcttat aaactccaag acattgaggg cgtcacatac
     1321 ctaatgcgtg gcatgctact ttgttga
//
LOCUS       XM_071831459             579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841231), mRNA.
ACCESSION   XM_071831459
VERSION     XM_071831459.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..579
                     /gene="LOC139841231"
                     /note="uncharacterized LOC139841231; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841231"
     CDS             1..579
                     /gene="LOC139841231"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687560.1"
                     /db_xref="GeneID:139841231"
                     /translation="MSLLNEHYISALTPTAIANCISSIQHLNGTNFASWKDQIKISLG
                     IIELNYALRFDQPAPLSDKSTVEQKRTYDMWKRSNCMSLMIMKNSISPAIRGAISDSK
                     NAKEFLEFVKGQFKGSSESHASTLILKMLTTKYDGVSGVREHIMMMNVMASKLKGMDM
                     EISEGFLVHFIMTSLSSQFGPFKINYNTQKEK"
     misc_feature    253..>549
                     /gene="LOC139841231"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcactcc ttaatgagca ttacatttca gctttgacac ccactgctat tgcaaattgt
       61 atttccagca ttcaacattt aaatggaact aattttgcat cgtggaaaga tcaaattaaa
      121 atttctctcg gcataattga attgaactat gctttaagat ttgatcaacc cgcacctctt
      181 agcgacaaaa gtacggttga acaaaagagg acttatgata tgtggaaaag atcaaattgc
      241 atgtccctaa tgataatgaa gaattctata tcgcccgcta ttcgaggagc catttccgac
      301 tccaaaaatg ctaaagaatt cttagaattt gtcaagggac aatttaaggg ctcatctgaa
      361 tctcatgcga gtacccttat tcttaagatg cttaccacaa agtatgatgg tgttagtgga
      421 gtacgtgagc acatcatgat gatgaatgtc atggcctcaa aactaaaggg catggacatg
      481 gaaatatctg aaggttttct cgttcatttc attatgacat ctctctcatc tcagtttggt
      541 ccttttaaga tcaactataa cactcaaaag gagaaatag
//
LOCUS       XM_071831460             345 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841232), mRNA.
ACCESSION   XM_071831460
VERSION     XM_071831460.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..345
                     /gene="LOC139841232"
                     /note="uncharacterized LOC139841232; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841232"
     CDS             1..345
                     /gene="LOC139841232"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687561.1"
                     /db_xref="GeneID:139841232"
                     /translation="MYTDTGSEVDVLYAHCLSQLPKYVGRKMRHSNAIISGFASSTEE
                     PIGRLKATVTVGTQPYLRSEVIDFYVVKSVTATNVILGRNFFRKFSAITSTTHGLLKF
                     PTRKGVATVEST"
     misc_feature    10..261
                     /gene="LOC139841232"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(10..12,16..18,22..24,103..111,238..240)
                     /gene="LOC139841232"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    10..18
                     /gene="LOC139841232"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    10..12
                     /gene="LOC139841232"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(103..114,124..135)
                     /gene="LOC139841232"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgtacactg acaccgggag tgaggttgat gtcttgtacg cccattgcct ttcccaactc
       61 ccaaaatatg tcggtagaaa aatgagacac tccaacgcca ttatctctgg atttgcgagc
      121 tctactgaag aacctatagg aagactcaaa gcaacggtga cggtaggcac acagccctac
      181 ctccgtagtg aggtcattga cttttatgtt gtcaaatctg tgaccgctac gaatgtgatc
      241 ttgggaagaa acttcttcag aaagtttagc gccataacct ccactactca cggcttgctt
      301 aaatttccaa cccggaaagg tgtggctaca gtcgaatcga cctaa
//
LOCUS       XM_071831461             693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841233), mRNA.
ACCESSION   XM_071831461
VERSION     XM_071831461.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..693
                     /gene="LOC139841233"
                     /note="uncharacterized LOC139841233; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841233"
     CDS             1..693
                     /gene="LOC139841233"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687562.1"
                     /db_xref="GeneID:139841233"
                     /translation="MLVDEEKNFGPKPFRIFDVWFEEDGLEDIVANSWNLPVPSINRK
                     YYEFRNRFKNVKGALKEWSRNKFGGLDGEIEALKVMAHTYEEKVDNNLLNDTERHEWL
                     ECRKKWLEKEKVKTCMMKQKSRIKWILEGDENTKFFHSIINRNNIKNNLRGLYINGIW
                     QDSPDVIKTEAFNHFSRIFKELEVERPSMEELTYPCLSANEASALELPFSEIEIKEAV
                     FNCGSNKAPGPD"
ORIGIN      
        1 atgttagtgg atgaagagaa aaactttggc ccaaaaccgt tcaggatctt tgatgtttgg
       61 ttcgaggaag atggtttgga agacattgtt gccaattcgt ggaacttacc agtacctagt
      121 atcaacagga aatattatga gttccgaaac cgttttaaaa atgtgaaggg tgcattaaag
      181 gaatggagta ggaataagtt cggggggttg gatggagaga ttgaagcact taaagttatg
      241 gctcacacat atgaagagaa ggtggataat aatctcctta atgacaccga aaggcatgag
      301 tggttggaat gtaggaaaaa gtggttggaa aaggaaaaag tgaagacgtg tatgatgaaa
      361 caaaaatcgc gcatcaaatg gattttggaa ggagatgaaa acacaaagtt ctttcactca
      421 attatcaata ggaataatat caagaacaac ttgcggggat tgtacataaa tggcatttgg
      481 caggattctc ctgatgtcat taaaaccgaa gccttcaacc atttttctcg cattttcaaa
      541 gagctagagg tagaaagacc ttccatggaa gagttaactt acccatgctt atctgctaac
      601 gaggcttcag ctttggaact cccatttagt gaaattgaga ttaaagaggc ggttttcaat
      661 tgcgggagca ataaagctcc cggtccagac tga
//
LOCUS       XM_071831462             471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 17.3 kDa class I heat shock
            protein-like (LOC139841234), mRNA.
ACCESSION   XM_071831462
VERSION     XM_071831462.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..471
                     /gene="LOC139841234"
                     /note="17.3 kDa class I heat shock protein-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 86 Proteins"
                     /db_xref="GeneID:139841234"
     CDS             1..471
                     /gene="LOC139841234"
                     /codon_start=1
                     /product="17.3 kDa class I heat shock protein-like"
                     /protein_id="XP_071687563.1"
                     /db_xref="GeneID:139841234"
                     /translation="MSIVPSLFNGRRSSIFDPFSLDIWDPFKDFQIPPSSSETSALVN
                     TRVDWKETPEAHVFKADLPGIKKEEIKVEVEDGNVLQISGERNVEKEDKNDKWHRVER
                     SSGKFTRRFRLPENTNMDQIKAAMENGVLTITVPKQEVKKPNVKSIDIFGPLVR"
     misc_feature    136..411
                     /gene="LOC139841234"
                     /note="Alpha crystallin domain (ACD) found in
                     Saccharomyces cerevisiae (Sc) small heat shock protein
                     (Hsp)26 and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally active as...;
                     Region: ACD_ScHsp26_like; cd06472"
                     /db_xref="CDD:107229"
     misc_feature    order(136..156,175..177,181..183,187..192,256..258,
                     271..273,280..306,310..312,325..327,382..390)
                     /gene="LOC139841234"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:107229"
ORIGIN      
        1 atgtcgattg ttccaagctt attcaatggc cgacgaagca gcattttcga cccattttct
       61 ctcgacattt gggatccatt caaagatttc cagattccac catcatcatc tgaaacatct
      121 gcattggtaa acacacgtgt ggattggaaa gaaacaccag aagctcacgt gtttaaggcc
      181 gatcttcccg ggattaaaaa agaagagatc aaagttgaag ttgaagatgg gaatgtgtta
      241 caaataagcg gtgagagaaa cgtcgaaaaa gaagacaaga atgataaatg gcatcgtgtt
      301 gaacgtagca gcggaaagtt cacaaggagg tttaggttgc cggaaaacac gaacatggat
      361 cagatcaaag cggctatgga aaacggggtg ctaacgatta ctgtgccaaa acaggaagtg
      421 aagaaaccca atgtgaagtc tattgatatc tttggacctc tggttagata a
//
LOCUS       XM_071831463            1461 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841236), mRNA.
ACCESSION   XM_071831463
VERSION     XM_071831463.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1461
                     /gene="LOC139841236"
                     /note="uncharacterized LOC139841236; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841236"
     CDS             1..1461
                     /gene="LOC139841236"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687564.1"
                     /db_xref="GeneID:139841236"
                     /translation="MVSCFHGFRGFCVVLVLSVISSISLLYWSHSSVSFYFREQRLDL
                     GTGMGMVLSPNRPIDLLTFPMAWNHLSFSSNPPQQLLKIALFVKKWPDRNHAGGLERH
                     ALTLNLALAKRGHELHIFTASSSNFSFPKYPFENLHFHLSKPTIAGYLDQALVWNQLQ
                     AQNTTERPFDVVHTESVSLMHTRSKNVTNLAVSWHGIAYESIHSDIIQELLRAPNETK
                     SNQLTERNIKVVEEIKFFKKYAHHVATSDHVGDILKRIYMIPDNRVHVILNGVDEDVF
                     KPDYEKGQDFRSNFGISPSKSLIIGMAGRLVKDKGHPLMFEALKQIFTENSTLKETVM
                     VLVAGDGPWGARYKDLGPNLLVLGPLQPTQLAKFYKAIDIFVNPTLRAQGLDHTLLEA
                     VLTGKPLMATKLASITGSVIIGNEHGYTFSPTVESLKKCIYEVWEDGRGVLEQKGKVA
                     RERGIKLFTATKMADAYERLFLCISNGKKNQDYCKY"
     misc_feature    244..1413
                     /gene="LOC139841236"
                     /note="phosphatidyl-myo-inositol mannosyltransferase;
                     Region: GT4_PimA-like; cd03801"
                     /db_xref="CDD:340831"
ORIGIN      
        1 atggtgtcct gttttcatgg ttttcgcggt ttctgcgttg ttttagtcct ctcggttata
       61 tcatctatct ctttactcta ctggtcccac tcatcggttt ctttttactt tcgagaacaa
      121 cgattggatc ttggaacagg aatgggaatg gtattgagcc cgaaccgccc aattgatctc
      181 ttaacgttcc caatggcatg gaaccatctt tcgttttctt ccaacccgcc tcaacaacta
      241 ctaaaaatcg cactttttgt caagaaatgg cccgatagga accacgcagg cgggctagag
      301 cgacacgctt tgacactcaa ccttgcttta gctaaaagag gtcatgagct tcacatattt
      361 accgcttcct cttctaactt ttcgttccca aaataccctt tcgagaattt acatttccat
      421 ctttcaaaac cgactattgc cggttatctt gaccaagcac ttgtttggaa ccaattgcaa
      481 gctcaaaaca ccacggagag accctttgat gtggttcaca ccgaaagtgt aagcctaatg
      541 catactcgat caaaaaacgt tacaaatttg gcggtttctt ggcatgggat tgcgtacgag
      601 tcgatacatt ctgatatcat tcaagagctc ctacgagcac caaacgaaac caagtctaac
      661 cagttgaccg aaagaaatat aaaagtagtc gaagagataa aattcttcaa aaaatacgca
      721 caccatgttg cgacaagcga tcacgttgga gacatactta aaaggattta catgattccg
      781 gataatcgag ttcatgttat actcaatggt gtcgacgaag atgttttcaa gccagattac
      841 gaaaaaggtc aagactttag gtcaaacttt ggaatctcgc cgtcgaaatc attgattata
      901 ggaatggcag gtagactcgt taaggataaa gggcacccgt taatgttcga agctctaaaa
      961 caaatattta ccgaaaattc aacgcttaag gaaaccgtaa tggttttagt agccggagat
     1021 ggtccatggg gtgctagata caaggatctc ggaccaaact tgctcgtttt gggtccatta
     1081 caaccgactc aactcgctaa attctacaaa gcgattgaca tttttgtgaa cccgactcta
     1141 cgagcacaag gtttggatca cacgttactg gaagcggttc ttacggggaa accgttgatg
     1201 gctacaaagc ttgctagcat tactgggtcg gtgatcatcg ggaacgaaca cgggtacacg
     1261 ttttcgccga ccgtcgaatc gctaaaaaaa tgtatttatg aggtttggga agatgggaga
     1321 ggagtattgg aacagaaagg taaagttgct agagaaaggg gtataaaact ttttactgca
     1381 acaaaaatgg cagatgcata tgaaagacta tttctatgca tctcaaatgg taaaaagaat
     1441 caagattact gcaaatatta g
//
LOCUS       XM_071831465             468 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides copper transporter 6-like
            (LOC139841237), mRNA.
ACCESSION   XM_071831465
VERSION     XM_071831465.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..468
                     /gene="LOC139841237"
                     /note="copper transporter 6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139841237"
     CDS             1..468
                     /gene="LOC139841237"
                     /codon_start=1
                     /product="copper transporter 6-like"
                     /protein_id="XP_071687566.1"
                     /db_xref="GeneID:139841237"
                     /translation="MDNNGMAMNDDGTMGGMSPSTPMSMNDTDSMGMGMDNMMTHMTF
                     YWGKNAWILFQGWPGSSTGMYILALIFVFLLAIIIEWLTHNNLTPTKSNRIMRTMIHT
                     LRVVFSYLVMLSVMSFNIGVFVMAVAGHAIGFYLFRVLKKSIEKDSEVTSMAC"
     misc_feature    124..411
                     /gene="LOC139841237"
                     /note="Ctr copper transporter family; Region: Ctr;
                     pfam04145"
                     /db_xref="CDD:461194"
ORIGIN      
        1 atggacaata acgggatggc catgaacgac gacggaacaa tgggaggaat gtcgccatca
       61 acacccatgt cgatgaacga taccgattca atgggaatgg gaatggataa catgatgaca
      121 catatgacgt tttattgggg taaaaatgct tggattttgt ttcaaggttg gcctggaagt
      181 agtacaggaa tgtacatttt agcacttatt ttcgtgttct tacttgcgat aattatagaa
      241 tggttaactc ataataatct tactccaacg aaatcaaacc gaattatgag gacaatgata
      301 catacattgc gtgtggtgtt ttcgtatttg gtgatgttat cggtgatgtc attcaacatt
      361 ggtgtatttg tgatggcggt tgcgggccat gccatcgggt tctatttgtt tcgagttctc
      421 aagaaatcga ttgagaaaga ttcggaggtg acttcgatgg cttgttag
//
LOCUS       XM_071831466             868 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841239), mRNA.
ACCESSION   XM_071831466
VERSION     XM_071831466.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 44% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..868
                     /gene="LOC139841239"
                     /note="uncharacterized LOC139841239; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841239"
     CDS             1..783
                     /gene="LOC139841239"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687567.1"
                     /db_xref="GeneID:139841239"
                     /translation="MSSTYDNFITIQPPSAGTLPHPPRRRRRRPRSGRRRRPSHVEPA
                     AATTDGVGGSSFRLSDSDAQSSARLDSSVAGDECGSSGIFSYNHSRIESSSDEIDLES
                     GELEMKVHFLGKNDKQCRICHLNFEVNGGGGGGDSSVDYDGDDGGGGDGGGPIELGCS
                     CKGDLGTAHKQCAETWFKIKGNMTCEICGAIAQNVGGDQTNETSNTNNDTEPVDRSAT
                     APRVGPTEARSFWQGRRIMNVLLGFMVLAFIVSWLFHFKVLP"
     misc_feature    352..567
                     /gene="LOC139841239"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     Region: RINGv; smart00744"
                     /db_xref="CDD:128983"
     misc_feature    order(355..357,364..366,481..483,496..498,505..507,
                     514..516,553..555,562..564)
                     /gene="LOC139841239"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438111"
ORIGIN      
        1 atgtcttcaa catacgacaa tttcattacc atccaaccac cttctgccgg aactttacct
       61 catccacctc gccggagacg tcgccgtcct cgttctggcc gtcgccggcg cccttctcat
      121 gtcgaaccag ctgccgcaac tacagacggc gtcggcggca gtagctttag actatccgat
      181 tccgacgcgc agtcgtcggc gcgtcttgat tcgtcagttg ccggagatga atgtggatct
      241 tctggaatct tctcgtataa tcatagtcgt attgaatctt cctccgatga aattgatttg
      301 gagagtggtg aattggaaat gaaagtgcat tttttaggga agaatgataa gcagtgtaga
      361 atttgtcatt tgaattttga agttaacggt ggtggtggtg gtggtgattc gtcggttgat
      421 tacgacggtg atgacggcgg aggtggtgac ggtggtggcc cgattgagtt agggtgtagt
      481 tgtaaagggg atctgggaac tgctcataaa caatgtgctg aaacttggtt taaaatcaaa
      541 ggaaatatga cttgcgagat atgtggtgcc atagcgcaaa atgtcggtgg ggatcagaca
      601 aatgagacaa gcaacaccaa caatgatact gagccagtgg atcgatcagc cactgcaccc
      661 agggtgggtc ctaccgaggc acgttcgttt tggcagggtc gcagaatcat gaatgtcttg
      721 ctgggtttca tggtacttgc atttatcgtt tcttggctct ttcactttaa agtgttgcct
      781 taattcatgt catttgcaga gggaggaaag tgttgtgttg agaggctata tatgtttctc
      841 tgtgtttgta tgaattggat gttggatc
//
LOCUS       XM_071831467             960 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841240), mRNA.
ACCESSION   XM_071831467
VERSION     XM_071831467.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..960
                     /gene="LOC139841240"
                     /note="uncharacterized LOC139841240; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841240"
     CDS             1..960
                     /gene="LOC139841240"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687568.1"
                     /db_xref="GeneID:139841240"
                     /translation="MDSTWMSLCRSSPAYEKGLDKFIECIFSKKGKDGHIYCPCKYCG
                     NHKRVDRVQAKTHLLCDGFFKGYKIPNVYFKPDDTPTFEDADEDDMQALAQCVFNVFE
                     DEDEDKDDIHQIENQTVPNLNAEKFNKVLEDAKKELYPGCKFSVLSFIVRLFHSKCDG
                     KCNEKGFNMILDTMREAFPHAAIPKSLYELRKIIRDLGQGYEKIDACQNDCTLYWKEN
                     KDKIKCDVCQTSRYKQINNDSENESTTEANNDGDYKAKKVGAKVLRYFPLIPRLQRLF
                     MSPKTAWSMRWNEESRTKDGRLRHPADSPAWKTFDYENKEFAK"
     misc_feature    10..204
                     /gene="LOC139841240"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    883..>957
                     /gene="LOC139841240"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atggactcga cttggatgtc cttgtgtaga tcttcccctg catacgaaaa aggacttgac
       61 aaatttatag aatgtatttt ctctaaaaag ggaaaagatg gtcatatata ttgtccgtgc
      121 aaatattgcg gtaatcacaa acgggttgat cgggtccagg ctaaaacaca tttgctatgt
      181 gacgggtttt tcaaaggtta taaaattcca aatgtgtatt tcaaaccgga tgatacacca
      241 acgtttgaag atgctgatga agatgatatg caagcattgg cccaatgcgt cttcaatgtg
      301 tttgaagatg aagatgaaga taaagatgat atccatcaaa ttgaaaatca gactgtacca
      361 aacttaaatg ctgaaaagtt taataaagta ttggaagatg caaagaaaga attatatccc
      421 ggctgtaagt tctctgttct ttcgttcatt gttagactct tccattcaaa atgtgatgga
      481 aaatgtaatg aaaaaggatt caacatgatt cttgacacaa tgagggaagc cttccctcat
      541 gctgccatac cgaagtcatt gtatgaatta aggaagataa taagagattt gggtcaaggt
      601 tatgagaaaa ttgatgcttg tcaaaatgat tgtacgttgt actggaaaga aaacaaggac
      661 aaaattaagt gtgacgtatg tcagacctca agatataaac aaattaataa tgattctgaa
      721 aatgagtcaa ccacagaagc taataatgat ggtgattata aagctaagaa ggttggagca
      781 aaagtgttgc gttattttcc actcatacca cgcttgcaaa gattgtttat gtctcctaaa
      841 acggcctggt cgatgagatg gaatgaagag agtcgtacga aagatggtag attaagacat
      901 cccgcagatt caccagcctg gaaaacattc gattatgaga ataaggaatt tgctaaataa
//
LOCUS       XM_071831468             663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841241), mRNA.
ACCESSION   XM_071831468
VERSION     XM_071831468.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..663
                     /gene="LOC139841241"
                     /note="uncharacterized LOC139841241; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841241"
     CDS             1..663
                     /gene="LOC139841241"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687569.1"
                     /db_xref="GeneID:139841241"
                     /translation="MFKECYKIGEGEAARVFEKMKDLTEKLGDGATNAPGPDDVFATL
                     MGKAKNGTAEMYGLGVRANHLWGAGPSRLSVSKANAQLMSRNAQLEEENARLKAEKNN
                     GPGAQNDGSRVHANGSGDHHLWVDKEVYVKSINFEKVEIGKLRSVDPNTVLNGTELGH
                     GWCEVHVQVAIKKDEALFRPYDYLKCIHDVSGRSIAWPAQLIEDAFIGTTKVSHYIST
                     LF"
     misc_feature    382..567
                     /gene="LOC139841241"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
ORIGIN      
        1 atgtttaagg aatgttacaa aatcggtgaa ggtgaagctg ctcgtgtctt tgaaaaaatg
       61 aaagacctaa ccgagaaact cggtgatggt gcaactaatg cacctggacc agatgatgtt
      121 tttgccacgt taatgggtaa agctaaaaat ggtactgcag aaatgtacgg acttggtgtt
      181 cgcgccaatc atttgtgggg tgcaggacct agtcgattat ctgttagcaa agcaaatgct
      241 cagctgatgt ctagaaatgc acaacttgaa gaagaaaatg caaggttaaa agccgagaag
      301 aacaatggtc cgggtgctca gaatgatggt tcgcgtgttc atgctaatgg ttcgggtgat
      361 caccatttat gggtcgataa ggaagtttat gtaaaaagca ttaactttga gaaggtagaa
      421 ataggaaagt tgaggagcgt tgatccaaat acggttctta atggaacaga acttggacat
      481 ggttggtgtg aggtccatgt tcaggtggcc attaaaaaag atgaagcttt gtttaggcca
      541 tatgattatt tgaaatgcat tcatgacgtc agtggtaggt ctattgcttg gcctgctcag
      601 ttaatcgagg acgcttttat tggtactacc aaagtttctc attatattag tacacttttt
      661 tga
//
LOCUS       XM_071831469             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides conserved oligomeric Golgi
            complex subunit 4-like (LOC139841242), mRNA.
ACCESSION   XM_071831469
VERSION     XM_071831469.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139841242"
                     /note="conserved oligomeric Golgi complex subunit 4-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139841242"
     CDS             1..591
                     /gene="LOC139841242"
                     /codon_start=1
                     /product="conserved oligomeric Golgi complex subunit
                     4-like"
                     /protein_id="XP_071687570.1"
                     /db_xref="GeneID:139841242"
                     /translation="MGRREYFFFCSNVSGKVRELDLAQSHVNDTLQRTDTIVEKSNCI
                     DGVQKALESDDFESAANYVKTFLEINGICKDSGSDQREMFSAKKQLETIVRRRLSTVV
                     DQRDHAMVLRFISLYSPLALNGEGSQVYFSYLKKVISIRSKVEFEQLVELMEQNRNSV
                     YFVTCLTNLFEDIVMTINSCMTNLFKDIVVEDNRST"
     misc_feature    253..>534
                     /gene="LOC139841242"
                     /note="COG4 transport protein; Region: COG4; cl07072"
                     /db_xref="CDD:471588"
ORIGIN      
        1 atgggacgga gggagtactt ttttttttgt tctaatgtat ctggtaaggt tcgagaactc
       61 gatttagctc aatctcatgt taatgatact ttacagcgta ctgatacgat tgttgagaag
      121 tctaattgta ttgatggtgt acaaaaggct ttagagagtg acgattttga atctgctgct
      181 aattatgtta aaacatttct tgaaatcaat ggtatatgta aggattctgg ttcagatcag
      241 agagagatgt ttagtgctaa gaaacaactg gaaaccattg ttagacggag gttatcgact
      301 gttgtggatc agcgagatca tgctatggtt ttaaggttta ttagtcttta ttcgccacta
      361 gcattgaatg gagaaggatc gcaggtgtat tttagttatc tgaagaaggt gatatcgatt
      421 agatctaaag tcgagtttga gcaattggtg gagctcatgg agcaaaatcg taactcggtt
      481 tattttgtca cttgtttgac taatttgttt gaggatattg tgatgacaat taattcttgc
      541 atgactaatt tgtttaagga tattgtggtg gaggataatc gttcaacttg a
//
LOCUS       XM_071831470            1695 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841243), mRNA.
ACCESSION   XM_071831470
VERSION     XM_071831470.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1695
                     /gene="LOC139841243"
                     /note="uncharacterized LOC139841243; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841243"
     CDS             1..1695
                     /gene="LOC139841243"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687571.1"
                     /db_xref="GeneID:139841243"
                     /translation="MKRRSRKDQEFTHPFSDSKKHVHGVYKRRKERVLRKFFMVLPFC
                     LEEMNPNGQPIHNDEGNPIGYGPPVNQEQQNDPNNTPMWNTRLAAPTVVPPAITKPPI
                     GADNWKVEGNFFTMIKDMFFHGLIEENPFEHIQHFNDICDIYKTKDVTDDAFKLRAFP
                     FTLQGDAKAWLRNLPPDSIRTFQDLTDAFINHFFSPSKVEQLRMKINGFTQRGDESFQ
                     QSQPSKSLEEIMKNYIKKVETTEAFLLKENRFLKQRLKHQQASFQNLESTVGRLSNQV
                     AERPHDTLPSNRQVNPSNNYNNTRQHNQNQQNNNTRVIPIESTNQNPNHPNRNENVNA
                     ITTRSGLTTQGIEDPHPHPFIIHEPLPSFIEEETEVGEEKGKEKVNSTEGTGNDETGK
                     KKGNVPLKATRPVPYPKALKKDKLAAQYKKFQDMMKNISINLPIIDVHKGMPNYGRFI
                     KELISQRGKYHDETSFFIEEECNKILESRLRIPKKLGDPGKFVFPCKFGESEVFNALA
                     DLGASINLMPHLLYERLGLGPLNLTRIRIRLANHSFDTAIGIAEDILLALTPWCSL"
     misc_feature    469..>657
                     /gene="LOC139841243"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1480..>1662
                     /gene="LOC139841243"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1525..1527,1531..1533,1537..1539,1609..1617)
                     /gene="LOC139841243"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    1525..1533
                     /gene="LOC139841243"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    1525..1527
                     /gene="LOC139841243"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(1609..1620,1630..1641)
                     /gene="LOC139841243"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgaaaagga gatcccgaaa ggatcaagag tttacacatc cattctccga ttcgaaaaaa
       61 cacgtgcacg gggtttacaa gcgtaggaaa gagagggtat taaggaaatt ttttatggtt
      121 ttgccatttt gtttagaaga gatgaatcct aacggtcaac caattcacaa tgatgagggt
      181 aatccaattg gttatggtcc accggttaat caagagcaac aaaatgatcc aaacaacaca
      241 ccgatgtgga acactagatt ggcggcacct acggtggtac ctccggctat tacaaaacca
      301 ccaattggag ccgataattg gaaggttgag ggaaacttct tcacaatgat caaagatatg
      361 ttcttccatg ggttaataga agaaaatcct ttcgagcaca ttcaacactt taacgatatc
      421 tgtgatatct acaaaaccaa agatgttacc gatgatgctt ttaagttaag ggcattcccc
      481 tttacacttc aaggagatgc gaaagcttgg ctaaggaatt taccacccga ttctattagg
      541 acttttcaag atttaaccga cgcgtttatc aatcacttct tttcaccatc aaaggtggaa
      601 caacttagaa tgaaaattaa tggattcacc caacggggtg atgagtcttt tcaacaatcc
      661 caaccttcga agagcctaga ggaaatcatg aaaaattata tcaagaaggt ggaaacaacc
      721 gaagcattct tattaaagga gaataggttc ttgaagcaac gattaaagca ccaacaagca
      781 tcatttcaaa acctagaaag taccgttgga agactttcaa accaagttgc cgaaagacct
      841 cacgacacct taccttcaaa cagacaagtt aacccgagca acaattacaa caatactcga
      901 caacacaacc aaaatcaaca aaacaacaac acaagagtga ttcctatcga aagcaccaac
      961 caaaacccta accacccaaa ccgaaatgaa aatgtcaatg ccataaccac tcgaagcggt
     1021 ctaaccactc aaggaattga agatccccat ccacatccct ttatcatcca tgaaccacta
     1081 ccaagtttta ttgaagagga aaccgaggtt ggtgaggaga agggtaaaga aaaggtgaac
     1141 tcaaccgagg gtacgggtaa tgatgaaacg ggtaagaaaa agggtaatgt gcctttgaag
     1201 gctacacgac cggtgccata tccgaaagct ttaaagaagg acaagttggc ggctcaatac
     1261 aaaaagtttc aagatatgat gaaaaacata tcgattaact tgccaatcat agatgttcat
     1321 aaaggaatgc caaactatgg ccggttcatc aaggagctaa tatctcaaag gggtaaatat
     1381 catgatgaaa catctttctt tattgaagaa gagtgcaata agattcttga atcaaggcta
     1441 aggattccta aaaagttagg agatccggga aaatttgttt tcccttgtaa gttcggtgaa
     1501 tcggaagtat tcaatgcact agccgatttg ggtgcaagca ttaacctaat gccccattta
     1561 ctttacgaga gacttggact tggacctctt aatctgaccc gaattaggat aagattggcc
     1621 aaccattcat ttgacaccgc tattggcatc gccgaggaca tcttgttagc attgacacct
     1681 tggtgttccc tgtag
//
LOCUS       XM_071831471             693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841244), mRNA.
ACCESSION   XM_071831471
VERSION     XM_071831471.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..693
                     /gene="LOC139841244"
                     /note="uncharacterized LOC139841244; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841244"
     CDS             1..693
                     /gene="LOC139841244"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687572.1"
                     /db_xref="GeneID:139841244"
                     /translation="MRQGYYWQTIYIDTIEIIKACDAGQWHGTVQRLPKYDLISVSSA
                     WPFCKWAIDIVGPFPRSVGNAKYGLSNEIVSDNDKQFADNPFKSWCEELNIKQTFTFV
                     AHPQANGQVEVTNKEIVAGIKARLGLSQTKWVDEVPYVLWAHCTTPKWSMGKTPFSLV
                     YGTEAVIPAEICVSTQRVLAFDIENNSSILRENLNLLEERRIMAAIRQADAKQRMAKY
                     YNKRVIYVQFKD"
     misc_feature    <193..336
                     /gene="LOC139841244"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgcgacaag gatattattg gcaaacaatt tacatagata caatagagat aattaaagca
       61 tgtgatgccg gtcagtggca cggaaccgtc cagcgtttac ccaaatatga tttaatctca
      121 gtatcgtctg catggccatt ttgtaagtgg gcaattgaca tagtaggacc atttccacgg
      181 agtgttggaa atgcaaaata tggtttatca aacgaaattg taagtgataa tgataaacag
      241 tttgcagata atccgttcaa aagttggtgt gaagaattaa acatcaaaca aacatttacc
      301 tttgttgctc acccacaagc caatggccaa gttgaggtaa caaataagga aattgtagcc
      361 ggtataaagg ctaggttggg tttgagtcag actaaatggg tagatgaagt accatatgtt
      421 ttgtgggctc actgtacaac gccaaaatgg agcatgggta aaacaccgtt cagcttggta
      481 tatggcactg aggcagtaat accagctgag atctgtgttt cgacacaaag agttttggca
      541 tttgatatag aaaataattc atctatcttg cgtgaaaact tgaatttatt ggaagagagg
      601 cgaatcatgg ccgccatccg tcaagcagat gctaagcagc gaatggcaaa atattataac
      661 aagcgagtca tatatgtgca attcaaagat tga
//
LOCUS       XM_071831472             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841245), mRNA.
ACCESSION   XM_071831472
VERSION     XM_071831472.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139841245"
                     /note="uncharacterized LOC139841245; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841245"
     CDS             1..636
                     /gene="LOC139841245"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687573.1"
                     /db_xref="GeneID:139841245"
                     /translation="MIGAYQPEGEEHTYALKFCFYASNNEAEYEALLFGLRIASEMGI
                     RHFRAYVDSQIVAQQVNGAFEEKDISMKRYLQLVEKILKFFETLEVLQISRNKNTKAD
                     VLSKLATLTFDHLHKKVLVEVLKDKSIDEKVVVATVEEGGPCWMTPYVKYLKDGTLPG
                     DVTEARRIKVSAPFYVLENGVIYRKSFNGPNLRCLAPQKAIDVVKEMHEGL"
     misc_feature    4..324
                     /gene="LOC139841245"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgattggtg cttaccagcc cgaaggggaa gaacatacat atgcactaaa gttttgtttt
       61 tatgcatcta ataacgaagc agagtatgag gcattgcttt tcggcctccg catagcgtct
      121 gagatgggaa taaggcattt tcgtgcatat gtagattctc agattgtagc acaacaagtt
      181 aatggagcat ttgaagaaaa ggatatctca atgaaaagat atttgcaatt ggttgaaaag
      241 attttaaaat tttttgaaac tttggaggtt ttgcaaatat caagaaataa gaatacaaag
      301 gcagatgttt tgagcaaatt agcaacacta acatttgacc acttgcataa gaaagttttg
      361 gtggaagttt tgaaggataa atcaattgat gaaaaagtgg tagtagcaac agttgaagaa
      421 ggaggaccgt gttggatgac tccctatgtg aaatatttga aagatggaac actgccaggt
      481 gatgtcacag aagcaagacg gataaaggta agtgctccgt tttacgtctt ggaaaatggt
      541 gtgatttata gaaaatcttt caatggtcca aatttgaggt gtttagcacc acagaaagca
      601 atagatgtgg tgaaagagat gcatgaaggt ttgtaa
//
LOCUS       XM_071831474            1741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            DIVARICATA-like (LOC139841246), mRNA.
ACCESSION   XM_071831474
VERSION     XM_071831474.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1741
                     /gene="LOC139841246"
                     /note="transcription factor DIVARICATA-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:139841246"
     CDS             676..1572
                     /gene="LOC139841246"
                     /codon_start=1
                     /product="transcription factor DIVARICATA-like"
                     /protein_id="XP_071687575.1"
                     /db_xref="GeneID:139841246"
                     /translation="MKWEEDIMSNSSSWMIEDSLKSTIWTPIENKLFENALAKFDKDT
                     PDRWHRVEEMVPGKTVSDVMRQYKELVDDVSSIEAGFSPKYRYNNSNSSNCGITLESG
                     NNQWFDRCIYPPYGGVGEKRSPAVVAACRPVEQERKKGVPWTEEEHKLFLLGLKKYGK
                     GDWRNISRNYVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNVIENQTPLL
                     KNKRTQPEQCKFQWNHPNGDGDGGGVGAVTNQTNGNIFMPSHYRSNVGLKMGGGGGLH
                     DLYGAPQSMVVQMQPAVHYPDG"
     misc_feature    748..888
                     /gene="LOC139841246"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cd00167"
                     /db_xref="CDD:238096"
     misc_feature    order(748..750,847..852,856..861,865..873,877..885)
                     /gene="LOC139841246"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     misc_feature    1087..1245
                     /gene="LOC139841246"
                     /note="myb-like DNA-binding domain, SHAQKYF class; Region:
                     myb_SHAQKYF; TIGR01557"
                     /db_xref="CDD:130620"
     misc_feature    order(1102..1104,1195..1200,1204..1209,1213..1221,
                     1225..1233)
                     /gene="LOC139841246"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
ORIGIN      
        1 aacagcacta tcccctttcc aaaattaggt gtccaacagt tctatgcttt ccaattttgg
       61 aaactatgta attaactggt tcagatcctg ttgtgtatct aaggatttaa ttgttcatca
      121 atataaattt gggaattata ttggtttgat ttttaaaagt ggggttttaa agattcctta
      181 ggtagttggg tggttgccca tggtaaacag aaaaactaaa gctattctga ttccttttac
      241 aaaaatagtt tcttgattga tttaacccct catcatattt ctgttataaa acacccttac
      301 atttgctacc ttgctccaag tttcatcctt tttcccctca aaacccaata aagatttgaa
      361 atttattact gggttttatt ataaatccaa tttcataaca ctcttacaat tgctcccctg
      421 ctccaaattc catattttgt cactcaaacc cttcaaagtt tagactttgc tttctgggtt
      481 ttattggaaa ctacttatat tgaagtgggt gttacaaata ttgcatcttg attgattcaa
      541 ctatcatatt tctgttatca gttatcctca catttcttcc cctgtttcta ccctgctcca
      601 aaatttcatc tttgttcact tggactctta aagtattaat tctgttaatt ggattcttat
      661 ttgatttaag ttttgatgaa gtgggaagaa gatatcatgt caaattcatc aagttggatg
      721 attgaagata gtttaaaaag cacaatttgg actcctattg agaacaaatt atttgaaaat
      781 gctcttgcga aattcgataa agacactcct gatcggtggc atagggtgga agaaatggtt
      841 ccgggaaaaa cagtgagtga tgtaatgcgg caatataagg aattagtaga tgacgtcagc
      901 agtattgagg cagggttttc tccaaagtac agatataata acagcaatag tagcaattgt
      961 gggattacat tagaatcggg taataatcaa tggtttgatc ggtgtatata tccgccgtat
     1021 ggtggcgtcg gagagaagcg gtcgccggca gtagtggctg catgccgccc tgttgaacaa
     1081 gaaaggaaaa aaggcgttcc ttggacagaa gaagagcata aattgtttct tttggggtta
     1141 aagaagtatg gaaaaggaga ttggagaaat atatcaagaa attatgttgt tacaagaaca
     1201 ccaacacaag ttgctagcca tgctcaaaag tatttcattc gacagctttc ggggggtaaa
     1261 gataaaagaa gagcaagtat tcatgatata actacagtca atgttatcga aaatcaaacc
     1321 cctttgttga aaaataaaag aacacagccc gaacaatgta aatttcagtg gaatcatccc
     1381 aatggtgatg gtgatggtgg cggtgttggg gcggtaacca accaaacgaa tggtaacatt
     1441 ttcatgcctt ctcattatag aagtaatgta gggttaaaaa tgggcggtgg tggtggttta
     1501 catgatttgt atggcgcacc tcagagtatg gttgttcaga tgcaacccgc ggtgcattac
     1561 cctgatggat gaatcaatga agctgtttta acgcctttag tgctttcgat agtgattgat
     1621 ttctttttgg tttgatttga gcagtttttt agatgttttt tatggtgttt tggtgtctat
     1681 cttgtggtgt ttatctataa tgtgaatata caataattgt ttagtcaggt tttttttttt
     1741 t
//
LOCUS       XM_071831475            1770 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            8.1-like (LOC139841247), mRNA.
ACCESSION   XM_071831475
VERSION     XM_071831475.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1770
                     /gene="LOC139841247"
                     /note="protein NRT1/ PTR FAMILY 8.1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139841247"
     CDS             1..1770
                     /gene="LOC139841247"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 8.1-like"
                     /protein_id="XP_071687576.1"
                     /db_xref="GeneID:139841247"
                     /translation="MPEIVFRNIPINVQEDTYTKDGTIDYQNNPADKRITGTWKACPY
                     ILGNECCERFAFYGVIRNLSPYFETRLDQHHATASKTVLNWSRTCYLTPLIGAFFADA
                     YIGRYWIIFIFSIIYVLGMSLLTISASVPGLKPSCKSKGNCKATSADIEIAYVALYLV
                     ALATGGIKSCVSTYGADQFDEADEVENKRKSSFFNWFYFASSIGALLTTSIQAVIQDR
                     GWGWKFGLPAVAMSIAVGSFYSGTHLYRYQKPSGSPFTRIFQVIVASWRKRGVHLPID
                     KSNLYETRDAKSTIVGSRKIEHTKDFSFLDKAAVELQSDQFKTSIDPWRLCTVTQVEE
                     FKSIIKLLPIWATTIIFSTVYRQMSDLFILQGSKMDLTVIKFKIQQPETIRIFDILSV
                     LFWIPVYDRVIVPYTRKYTGHKAGITQLQRIGIGLLISIYAILSAGVLEIFRLRIIRR
                     NNYYDLKNIPMSVFWQVPQYFLIGCAEVFTFIGHIEFFYDQAPDSMRSLCSALSLSTV
                     SFGSYLSSLLVTIVRRITTKGGKPGWIPDDDNLNHVSLQNFFWLLSLLSLINLGAYLL
                     VARWYTYKRAVGAHLTGGFNLRA"
     misc_feature    115..1716
                     /gene="LOC139841247"
                     /note="Major Facilitator Superfamily; Region: MFS;
                     cl28910"
                     /db_xref="CDD:475125"
     misc_feature    order(154..159,166..171,178..180,277..279,490..495,
                     499..507,514..516,592..594,601..606,613..615,1042..1044,
                     1051..1056,1063..1071,1078..1080,1174..1176,1186..1188,
                     1426..1431,1441..1443,1453..1455,1501..1503,1510..1515,
                     1522..1527,1534..1536)
                     /gene="LOC139841247"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:349949"
ORIGIN      
        1 atgcctgaaa tagtctttag aaacataccg attaacgtac aagaagatac atacactaaa
       61 gatggcacaa ttgattacca aaacaatcct gctgacaaga ggattacagg aacctggaag
      121 gcctgtcctt atattctcgg aaatgagtgc tgtgaaagat ttgcatttta tggagtgata
      181 agaaatctat ctccttattt tgagactaga cttgatcaac atcacgctac tgcgtctaaa
      241 accgtcttga attggtctcg aacgtgttat ctcacgccat tgattggggc tttttttgct
      301 gatgcctata taggcagata ttggatcatt ttcattttct ccatcatcta tgtcttagga
      361 atgtctttat tgacgatatc tgcatccgta ccaggattaa aaccatcatg taagtcaaaa
      421 gggaattgca aagctaccag tgcagacatt gagattgcat acgtggcact ttatcttgtg
      481 gcccttgcca cgggagggat caaatcatgt gtctcaacct acggtgcgga tcaatttgat
      541 gaagctgatg aggttgagaa caaacgcaag agttctttct tcaattggtt ctatttcgca
      601 agcagtatcg gtgcattact tactacatca attcaagctg tgatccaaga tagaggttgg
      661 ggttggaagt ttggtctacc agctgtggcc atgtcgattg cggttggatc gttctactca
      721 ggaactcatt tgtaccggta tcaaaaaccg agtggaagcc catttactcg gatttttcag
      781 gtcattgtgg cttcttggag gaaacgtggg gtccatttgc ctatcgacaa gtcgaatttg
      841 tatgaaacca gagacgccaa gtctactatc gttggaagtc gcaagattga gcataccaaa
      901 gattttagtt tcttggacaa ggcagctgta gagttacaat cagatcaatt taaaacatcc
      961 atcgatccat ggcgtctgtg caccgtgacc caagtagaag aattcaaatc catcatcaaa
     1021 ctgcttccga tatgggcaac aactatcatc ttcagcacag tctaccgtca aatgagcgat
     1081 ctgttcatac tacaaggttc taaaatggac ctcacagtaa taaaattcaa gatccagcaa
     1141 cctgaaacga ttagaatctt cgatatcctt agtgtacttt tctggatccc ggtttacgac
     1201 agggtcattg taccatatac ccgaaaatat acaggccaca aagcgggcat cacgcagctc
     1261 caaagaatag gcatcggttt attaatctct atttacgcaa tactgtcagc cggagtttta
     1321 gaaatcttta ggctcagaat tattagaaga aacaattact acgatttaaa gaatattccc
     1381 atgtcggttt tctggcaggt cccgcagtat ttcttgattg gttgtgcgga agtttttacg
     1441 ttcattggac atattgagtt cttttacgat caagctcctg attctatgag gagtttgtgt
     1501 tctgcgttat cgctatcaac agtttctttt gggagttatt tgagttcgtt acttgtgacg
     1561 attgtaagaa ggattactac taaaggaggt aaaccgggtt ggatacctga tgatgataat
     1621 ttaaatcacg tgtcgttgca aaatttcttc tggcttttga gtttattgag tttgataaat
     1681 cttggagctt atcttcttgt ggctaggtgg tacacttata aacgagctgt cggggctcat
     1741 ttaactggtg gttttaactt gagggcttag
//
LOCUS       XM_071831476             396 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841248), mRNA.
ACCESSION   XM_071831476
VERSION     XM_071831476.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..396
                     /gene="LOC139841248"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139841248"
     CDS             1..396
                     /gene="LOC139841248"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687577.1"
                     /db_xref="GeneID:139841248"
                     /translation="MENSKRMATPMATNVKLTLEGEGEPFDSTKYRGMIGYLLYLTAS
                     RPDIMFSVCLCARFQENPKTSHVEAVKRIFRYLKGTMHLGLRYPKFTGIDIMCFADSD
                     HGGSMIDRISTSGVSAFVGLCLTSWFSKK"
     misc_feature    286..>393
                     /gene="LOC139841248"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggagaact cgaaacgaat ggcgactccg atggcaacaa atgtgaaact tactttagaa
       61 ggagaaggag aaccatttga tagtactaaa tataggggaa tgattggata ccttctttat
      121 ttaacggcaa gtcggcccga catcatgttt agcgtgtgct tatgtgcaag atttcaagag
      181 aatccaaaga cgtcgcacgt agaggccgtt aaaagaatct ttagatactt aaaaggaaca
      241 atgcatcttg ggttacggta tccaaagttt accgggattg atattatgtg ctttgcggat
      301 tccgatcatg gtggatcaat gattgataga ataagcacaa gtggagtatc cgcgttcgtg
      361 gggctttgct taacgtcatg gttctcaaag aagtaa
//
LOCUS       XM_071831477            1026 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841250), mRNA.
ACCESSION   XM_071831477
VERSION     XM_071831477.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1026
                     /gene="LOC139841250"
                     /note="uncharacterized LOC139841250; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841250"
     CDS             1..1026
                     /gene="LOC139841250"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687578.1"
                     /db_xref="GeneID:139841250"
                     /translation="MGKKKGNEPLKATRPVPYPKALKKDKLAAQYKKFQEMMKNVSVN
                     LPITDVVKGMPNYGRFIKELISQRGKYHDETSFFIEEECNKILVSRPRIPKKLGDLEK
                     FVFPCKFGQSEVFNALADLGASINLMPHSLYERLGLGPLKPTWIRIRLANHSFDTAIG
                     ITEDILVSIDTLVFPVDFVIMEMKEDLQVPLILGRPFLATADTIILVQCNQLNIGVNL
                     EADFRELMNVNVEEFEIENETTREESFESIPHEDRFLKMRPPTLELKELLEYLVYAYL
                     KEENQLPVIISSRLTHNQKTRLVSLLKSHHSAIAWKTTDIPGINPSYCTHKILMEENF
                     KPVVQRQ"
     misc_feature    313..597
                     /gene="LOC139841250"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(358..360,364..366,370..372,442..450,574..576)
                     /gene="LOC139841250"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    358..366
                     /gene="LOC139841250"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    358..360
                     /gene="LOC139841250"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(442..453,463..474)
                     /gene="LOC139841250"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgggtaaga aaaagggtaa tgagcctttg aaggctacaa gacctgtgcc gtatccaaaa
       61 gctttaaaga aggataagtt ggcagctcaa tacaaaaagt ttcaagaaat gatgaaaaat
      121 gtctcggtca acctaccaat caccgatgtg gttaaaggaa tgccaaacta tggtcgattc
      181 atcaaggaac taatttctca aaggggcaaa tatcatgacg aaacctcttt ctttattgaa
      241 gaggaatgca acaagattct tgtatcaagg ccaaggattc caaaaaagtt aggagatctg
      301 gaaaaatttg ttttcccttg taagttcggt caatcggaag tgttcaatgc acttgccgac
      361 ttgggtgcaa gtattaacct aatgccccat tcactttacg agagacttgg ccttggacct
      421 cttaaaccga cctggattag gataagattg gccaaccatt cgtttgatac cgctattggc
      481 atcaccgagg acatcttggt tagcattgac accttggtgt tcccggttga ttttgttatt
      541 atggagatga aggaggacct tcaagtcccc ctcatcttag gaagaccatt tttggcaacc
      601 gctgacacca tcatcttggt acaatgcaac caactcaaca ttggagttaa tttagaggcg
      661 gattttaggg aattgatgaa tgttaatgtt gaagaatttg aaattgaaaa tgaaaccact
      721 cgggaagagt catttgaatc tatccctcat gaagatagat ttttgaaaat gagaccaccc
      781 actcttgagc ttaaagagct cctcgagtat cttgtatatg cttatcttaa ggaagaaaac
      841 caactaccgg tgattatctc ctcgagactc acccacaacc aaaagacacg acttgtttca
      901 ctacttaagt cccatcactc ggccatagca tggaaaacca cagacatccc ggggattaat
      961 ccatcatatt gcacacacaa aatcctcatg gaagagaatt ttaaaccggt tgtccaaaga
     1021 caatga
//
LOCUS       XM_071831478             990 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL4c-like (LOC139841251), mRNA.
ACCESSION   XM_071831478
VERSION     XM_071831478.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..990
                     /gene="LOC139841251"
                     /note="large ribosomal subunit protein uL4c-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139841251"
     CDS             1..990
                     /gene="LOC139841251"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL4c-like"
                     /protein_id="XP_071687579.1"
                     /db_xref="GeneID:139841251"
                     /translation="MASFLKSSFLSSTIFSNHSPSVFIKPPNPTRFPKSTTTVIRSEL
                     ATLPILSFDGTKIDETSLNLKSAHPDTARAVVHRGITTDLNNKRRGTASTLTRAKVRG
                     GGKKPFPQKKLDRARHGSQLTLLRPGGGVVFEPKPRDWSVKINKKEKRLVISTALAST
                     VVNRIVVEEFGEKFEKPKTKEFIEVLKRWGIDPKEKSMFFITLFMLNVDDNVALSSRN
                     TETLRMLTPRTLNLFNVLNADKLVFTQGLDYLNDVHGDDDVDVFEDEDEDEEAKLGFF
                     SPGAKKNLNRSNFFGQNLKILGQKLEILGQNLKILRQQLKNLGQNLKVLRQNL"
     misc_feature    133..738
                     /gene="LOC139841251"
                     /note="Ribosomal protein L4 [Translation, ribosomal
                     structure and biogenesis]; Region: RplD; COG0088"
                     /db_xref="CDD:439858"
ORIGIN      
        1 atggcgtctt tcttgaaatc ctccttcctt tcatccacca ttttttccaa tcattcaccc
       61 tccgttttca tcaaaccccc aaacccgacc cgtttcccaa agtccaccac caccgtaatc
      121 cggtccgagc tggcaacact cccaattctc tcattcgacg gcacaaaaat tgacgaaacc
      181 tccctcaacc ttaaatcagc ccacccagat accgcacgtg ctgtcgtcca ccgtggcata
      241 actaccgact taaacaacaa acgtagaggt acagcctcaa ctctcacacg tgctaaagtt
      301 cgtggtggtg gtaaaaaacc attcccacaa aagaaactcg atcgggccag acatgggtcc
      361 caactgaccc tactcaggcc cggcggagga gttgtgttcg aaccaaaacc tcgcgattgg
      421 tccgttaaaa tcaataaaaa ggaaaaaaga ttagtcattt cgactgcgtt agcgagtaca
      481 gtggttaata ggattgtggt ggaggaattt ggggagaaat ttgagaaacc gaaaacaaaa
      541 gagtttattg aggttttaaa aagatggggg attgatccga aagagaaatc aatgtttttt
      601 atcaccctct ttatgttgaa tgttgatgat aatgtggcac tatctagtag gaacactgag
      661 actttgagaa tgttgacacc taggactttg aatttgttta atgttttgaa tgctgataag
      721 ttggtgttta cccaagggtt ggattatttg aatgatgtcc atggagatga tgatgtggat
      781 gtattcgaag atgaagatga agatgaagag gcgaaacttg gatttttttc accgggggca
      841 aaaaaaaatt taaaccgtag caattttttt ggacaaaatt tgaagatttt ggggcaaaag
      901 ttggagattt tggggcaaaa tttgaagatt ttgaggcaac agttgaagaa tttggggcaa
      961 aatttgaagg ttttgaggca aaatttgtag
//
LOCUS       XM_071831480             639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841252), mRNA.
ACCESSION   XM_071831480
VERSION     XM_071831480.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..639
                     /gene="LOC139841252"
                     /note="uncharacterized LOC139841252; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841252"
     CDS             1..639
                     /gene="LOC139841252"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687581.1"
                     /db_xref="GeneID:139841252"
                     /translation="MGIKALKVSVDSQLVSNQMNGTFEARDPAMQKYLKLAEDMAKKF
                     ERFSITQVPRSMNKKADALSKLATSMFSHFTKDIWVEVLSQKSTDVVQEVAPIDEVDT
                     WMSPIIMYLKHGTLPIDGVAARKIRMKAPSYTLRDGIMFKKSFTALLLRCVGPNEAET
                     IIREVHEGTCGMHAGFRTVMGKIMRLGYFWQSMYRDTEEIIKAFASCQRHTP"
     misc_feature    <1..201
                     /gene="LOC139841252"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    457..630
                     /gene="LOC139841252"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggggataa aagccctcaa agtctcggtt gattctcagc ttgtatcgaa tcaaatgaat
       61 gggacgtttg aagctaggga tccagctatg cagaaatatc taaagttggc agaagacatg
      121 gccaaaaaat ttgaacgttt ctcaatcaca caagtgccac ggtctatgaa caagaaggcc
      181 gatgcgctaa gtaaacttgc cacaagcatg ttcagccact tcaccaagga catttgggtg
      241 gaagtcctaa gtcaaaaatc tactgacgtg gtacaggaag tcgctcccat tgatgaggtt
      301 gatacatgga tgagtccaat catcatgtat ctcaagcacg gtacgctacc aattgatggg
      361 gtggcggcaa ggaaaattcg aatgaaagca ccctcgtaca cgctaaggga tggtatcatg
      421 tttaaaaaat cttttaccgc actgttatta agatgcgtcg gtccaaatga ggcggaaaca
      481 atcataaggg aagtacatga ggggacttgt ggtatgcacg cagggttcag aaccgttatg
      541 ggaaagataa tgcggttggg gtatttttgg cagtcgatgt atcgtgacac agaagagatt
      601 atcaaagcgt tcgcttcgtg ccaacgtcac actccataa
//
LOCUS       XM_071831481             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841253), mRNA.
ACCESSION   XM_071831481
VERSION     XM_071831481.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139841253"
                     /note="uncharacterized LOC139841253; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139841253"
     CDS             1..498
                     /gene="LOC139841253"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687582.1"
                     /db_xref="GeneID:139841253"
                     /translation="MDILCVQETRWKGQGAARIDDYKLWFSGSRVARNGVGIVIGPTY
                     NEYVVDVGRRSDRIMSVRLVIQEVTYTVICAYAPHVGRGDAEKRHFWESLDEVVRMFP
                     PDHRLLIGGDLNGHIGTDVEGYAGVHGGFGYGVRNEEGLSILEFAVTHDLAVVNSFSR
                     REMLS"
     misc_feature    4..>420
                     /gene="LOC139841253"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atggacattt tgtgcgtcca agagactaga tggaaaggtc aaggggcggc taggatcgat
       61 gactacaagt tgtggttctc gggatcgaga gtagctagga atggggttgg aatcgttatt
      121 ggtccaacct ataacgagta tgttgtagat gtgggtagaa ggagcgacag gattatgtca
      181 gttcggttgg taattcagga ggtgacttac acggtcattt gcgcttacgc accccatgtg
      241 ggccgtggag atgctgaaaa gagacacttc tgggaatcgt tagacgaggt tgtgaggatg
      301 ttccctccgg accatcggtt acttattggt ggagatctca atggccatat aggaactgat
      361 gtggagggat atgcgggagt ccatggaggt tttgggtacg gagttagaaa tgaggaagga
      421 ctctctattc tcgaatttgc tgttacccac gatttggcag ttgtgaattc tttttcaaga
      481 agagagatgc tcagttag
//
LOCUS       XM_071831482            1671 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841254), mRNA.
ACCESSION   XM_071831482
VERSION     XM_071831482.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1671
                     /gene="LOC139841254"
                     /note="uncharacterized LOC139841254; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841254"
     CDS             1..1671
                     /gene="LOC139841254"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687583.1"
                     /db_xref="GeneID:139841254"
                     /translation="MDLVLQRRATKRVRQVQSKILWKKLNGEKAETFKTSVVDRVDAG
                     LETVSNDDADQMWNCLSTTIREVAKETLGVAVGTFRGHRAVRESWWFSDEVQSKVALK
                     QRRFRELITYGERTPTDRIRAEDSYKEAKREAKKAVALAKEKAYEDLYKKLDSKEGAN
                     DIYRIAKARERRRRDLDNIKFIKNDTGHTLVKEDEIRKRWEEYFLSLFVGGSPECHED
                     LQDPDIEQSQNNMDCERISQDEVRLALRKMGRNKSVGPDQIPIEAWRCLGDAGVRWLT
                     CLFNKTFQSSKMPMEWRLSETITIYKNKGDAQCCGAKSCVRTPVGNTEVFPIEVDLHQ
                     GSVLSPFLFALILDELSQGIQEGIPWCLIFADDIVLISDSKEELNRRLEQWRVALESN
                     GLHISRQKTEYLSCNFDRNDDEQGDGVNICIGDQILQPQTSFRYLGSMLHKSGRIDKD
                     VSHCIQVGWVKWRAATGVLCDKKIPLKLKGKFFKVAIRPAMLYGSKCWPMTKVYVSRF
                     ICFVVLGCLYVVIHVYCSSVVTSLEISCASHYCLAHHLSFCPELRPTV"
     misc_feature    <994..1323
                     /gene="LOC139841254"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1003..1005
                     /gene="LOC139841254"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggacttgg ttctccagag acgggccacc aagcgtgtta gacaagtcca atctaagatc
       61 ttgtggaaga agttaaacgg agagaaagct gagaccttta aaacatcggt tgtagataga
      121 gtggatgcag gattggaaac ggtatccaat gatgacgcgg accagatgtg gaactgtcta
      181 tcgaccacca ttagagaggt agccaaggaa accctaggtg tggctgtagg tacttttaga
      241 ggccatagag ctgttagaga atcatggtgg ttcagcgacg aggttcaaag caaagttgcg
      301 cttaagcaac gaaggtttag ggagctcatc acttatgggg agaggactcc gacggataga
      361 attagggctg aagatagtta taaagaagcc aaaagagaag ctaagaaggc tgtagcccta
      421 gcaaaagaaa aggcttatga agatctgtat aagaaactgg actccaaaga gggagctaat
      481 gatatttaca ggatagccaa agctagggag cgaaggcgta gggatcttga taacatcaag
      541 tttatcaaaa atgatactgg tcatacttta gtaaaggaag acgaaattag gaaaagatgg
      601 gaagagtatt tcttatctct cttcgttggg ggaagtccag agtgccatga ggacttacaa
      661 gaccctgata tagaacaatc ccagaacaac atggattgcg agaggattag ccaagatgaa
      721 gttagattgg cactacgaaa gatggggaga aataaatcag taggaccaga tcagatacct
      781 attgaggcgt ggaggtgcct tggcgatgct ggtgttaggt ggctaacttg cctatttaac
      841 aagacgtttc aaagctctaa aatgcccatg gaatggagac tgagcgagac tattaccatc
      901 tataagaata agggggatgc tcaatgttgc ggggcgaagt cttgtgttcg aacgccggtg
      961 ggaaatactg aagtttttcc aatagaagta gacctgcacc agggatcggt ccttagccct
     1021 tttctttttg ctttgatcct tgatgagctc tctcaaggga tacaagaggg catcccttgg
     1081 tgcttgatct ttgccgatga tattgtgctt atttcggatt ctaaggagga gcttaataga
     1141 agactagaac aatggagggt ggccttagaa agtaatggac tacacattag tagacaaaag
     1201 acggaatatc ttagttgcaa ttttgatagg aatgatgatg aacaaggtga tggagtgaac
     1261 atctgcattg gagaccagat cttgcaacca caaacttcgt ttagatacct aggctcgatg
     1321 ctccacaaat cggggaggat agataaagac gtgtcgcact gtatacaagt agggtgggtg
     1381 aagtggagag cagcgactgg agtcttatgc gacaagaaga tccccctaaa gctgaaagga
     1441 aaattcttca aggtggcaat tagacctgcc atgttatatg gatcaaagtg ttggccaatg
     1501 acgaaggtct atgtatctag gtttatatgt tttgttgttc ttggttgttt gtatgtggtc
     1561 atacatgttt attgttcttc tgttgtaact tctctcgaaa tttcttgtgc ttcgcactac
     1621 tgtcttgcgc accatctctc gttctgtcct gagcttcgcc ctactgtcta a
//
LOCUS       XM_071831483             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841255), mRNA.
ACCESSION   XM_071831483
VERSION     XM_071831483.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139841255"
                     /note="uncharacterized LOC139841255; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841255"
     CDS             1..903
                     /gene="LOC139841255"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687584.1"
                     /db_xref="GeneID:139841255"
                     /translation="MAPSALKNHSTLGSKTDNNHKVTPVEANMIHKWQAGQRRKAETL
                     EDWKQELITFPSLFNTNPSDAPVVIEARIENCIVREIYTDTGAGADIMYEHCFVQLPE
                     TVKETMKDTLVPLVSFANDPSWSEGSILLEVVLGKSPYKRTTHIEFLVVKANSQYNVI
                     LGRSAMMTFGAVTSTIHEMMKFPTPARIATFYAERRRAIECVQINRTTVKPIIHDDGS
                     VSPNPAFTYQKIIIENTLTKEIKEKLYNILAANLDVFAWKVSYITGVPRHIAEHKLNV
                     NPNISPVCQKKRGMAPERNKFLKE"
ORIGIN      
        1 atggcgccat ccgctttaaa gaatcactca actctcggga gcaagacaga caacaatcat
       61 aaggtaaccc ccgtcgaagc caatatgata cataagtggc aagccgggca gcggagaaaa
      121 gcagaaactt tggaagactg gaagcaagag ttaattactt tcccttcttt gtttaacact
      181 aatccgtctg atgctccagt agttattgaa gctagaattg aaaattgtat tgttagagaa
      241 atatacacgg atactggagc gggagcagat atcatgtatg agcattgttt tgtgcaatta
      301 ccggaaacag taaaagagac aatgaaagac acacttgttc ctttggtgag ttttgccaat
      361 gatccatcat ggtcagaagg cagcatactc ttagaagtag tattgggaaa atcaccatat
      421 aaaagaacaa ctcatattga atttcttgta gtgaaagcga attcacaata caatgtcatt
      481 ttgggacgat ctgcaatgat gacttttgga gctgtcacat caacaataca tgaaatgatg
      541 aagtttccca caccagctag gatagcaacg ttttacgctg aacggagaag agcaattgaa
      601 tgcgtgcaaa taaatcgaac aactgttaaa ccaatcattc atgatgatgg atcagtttca
      661 ccaaatccag cattcacata ccaaaaaatc attattgaaa acacattaac aaaagaaata
      721 aaagaaaagc tttataatat tttagcagca aacttagatg tttttgcatg gaaagtttct
      781 tatataactg gagtaccacg acacattgct gaacataagc ttaatgtgaa tccgaatatt
      841 tcacccgttt gtcaaaagaa aaggggcatg gctccagaac ggaacaagtt ccttaaagaa
      901 tag
//
LOCUS       XM_071831484             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841257), mRNA.
ACCESSION   XM_071831484
VERSION     XM_071831484.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139841257"
                     /note="uncharacterized LOC139841257; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841257"
     CDS             1..525
                     /gene="LOC139841257"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687585.1"
                     /db_xref="GeneID:139841257"
                     /translation="MWRPTTCQGYGQEKVPWFSDFTNYLALNVLQKGLSYQQKKKFFN
                     DLRYYFWEEPHLFRIGADQVIRRCVYGQEARETLMSCHSGPTGGHFRPNHTTKKVFDS
                     GFYWPTIFKDAHELVKRLNYVSKWAEAKALLTNDVRVVVKFLKGLFARFGVPKALISD
                     RGTHFSHSLMERVI"
ORIGIN      
        1 atgtggcggc cgaccacttg tcaaggttat gggcaagaaa aagtcccatg gttctccgat
       61 tttactaact acttggcctt aaatgtttta caaaaaggtt tatcatacca acaaaagaaa
      121 aagtttttca acgatttacg gtattacttt tgggaagaac cacacttgtt tcgcattggg
      181 gcagatcaag taattcggag atgtgtttat gggcaagaag cccgtgagac tttaatgagt
      241 tgtcatagtg gacctacggg agggcatttt agaccgaatc acaccactaa gaaggtgttc
      301 gattctggtt tctattggcc cactatcttc aaggatgcac atgagttggt taagcgatta
      361 aattatgttt caaaatgggc cgaggccaaa gccttgctaa ccaatgatgt gagagtagtt
      421 gttaagtttt taaaagggtt gtttgctagg tttggtgtgc caaaagcgtt gatctcggat
      481 cgagggacac atttttctca tagtcttatg gagagagtca tatag
//
LOCUS       XM_071831485            1155 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841258), mRNA.
ACCESSION   XM_071831485
VERSION     XM_071831485.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139841258"
                     /note="uncharacterized LOC139841258; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841258"
     CDS             1..1155
                     /gene="LOC139841258"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687586.1"
                     /db_xref="GeneID:139841258"
                     /translation="MKLKAAFLIKSVAPHLSQKRRSCVKSGTPVAVSAQIFRTIKGTR
                     LEETGVSKEKGKEKVNSTEGTGNDESAKKKCDESSKATRPVSYPKSLKKDKLAAQYKK
                     IQEMMKNVSVNLPITDVLKGMPNYGRFIKELISQRGKYHDETSFFIEEECNKILASMP
                     QIPKKLGDPEKFVFPCKFGESKVFNALADLGASINLMPHSLYERLGLGPLKPTRIRIR
                     LANHSFNAAIGIAEDILVSIDTLVFPVDFVIMEMKEDLQVPLILGRPFLVTANTIILV
                     QRNQLNIRVGEESVTINIREAMKQPSNTDDDECYAFDHIDLYVHKELEKLLKDDFREL
                     MNVNVDEFESENETTREESFEFIPHEDRFRIKSSWEEPPTLELKELPEHL"
     misc_feature    520..804
                     /gene="LOC139841258"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(565..567,571..573,577..579,649..657,781..783)
                     /gene="LOC139841258"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    565..573
                     /gene="LOC139841258"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    565..567
                     /gene="LOC139841258"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(649..660,670..681)
                     /gene="LOC139841258"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaagctaa aagcggcgtt cctaattaaa agcgtcgctc ctcacttaag ccaaaagcgc
       61 cgctcctgtg tcaaaagcgg cactcctgtc gctgtttcag cccagatttt cagaactata
      121 aaaggaacaa gattagagga aaccggggtt agtaaggaga agggtaaaga aaaggtcaac
      181 tcaaccgagg gtacgggtaa tgatgaatcg gctaagaaaa agtgtgatga gtcttcaaag
      241 gctacgagac cggtgtcata tccaaaatct ttaaagaagg acaagttggc ggctcaatac
      301 aaaaagattc aagaaatgat gaaaaacgtc tcggttaact tgccgatcac cgatgtgctc
      361 aaaggaatgc caaactatgg tcggttcatc aaggagctaa tatctcaaag gggtaaatat
      421 catgacgaaa cgtctttctt tattgaagag gaatgcaata agattcttgc atcaatgcca
      481 cagattccta agaagttagg agatccggaa aaattcgttt tcccttgtaa atttggtgag
      541 tcgaaagtgt tcaatgcact tgccgatttg ggggcaagca ttaacttaat gccccactca
      601 ctttatgaga gactcggtct tggacctctt aaaccaacaa ggattaggat aaggttggct
      661 aatcattcat ttaacgccgc tattggtatc gccgaggaca tcttggttag cattgacacc
      721 ttggtgttcc cagttgattt tgttatcatg gagatgaagg aggaccttca agtccccctc
      781 atcttaggaa gaccattttt ggtaaccgcc aacaccatca tcttagtgca acgcaaccaa
      841 ctcaacatta gagttggtga agagagtgtg accatcaata tccgagaagc tatgaagcaa
      901 ccgagtaaca ccgatgatga tgagtgctat gcctttgacc acattgacct ttatgtgcat
      961 aaagaacttg aaaagctttt aaaggacgat tttagggaat tgatgaatgt taatgttgat
     1021 gagtttgaaa gtgaaaatga gaccactcgg gaagagtcat ttgagtttat ccctcatgaa
     1081 gatagatttc gaatcaagtc ttcatgggag gaacctccca ctctcgagct taaagagctc
     1141 cccgagcatc tttaa
//
LOCUS       XM_071831486             468 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841259), mRNA.
ACCESSION   XM_071831486
VERSION     XM_071831486.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..468
                     /gene="LOC139841259"
                     /note="uncharacterized LOC139841259; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841259"
     CDS             1..468
                     /gene="LOC139841259"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687587.1"
                     /db_xref="GeneID:139841259"
                     /translation="MPSPSWGWRKILHLRDIIREFMFHKVGNGRLTSIWFDSWMVIGP
                     LSFISTRDMHRAALSPDACVQDIIVNSGIAWTNYLLLKYPLLNDINVLVSEVEDVIVW
                     KVQDSSLKQFSIILSWNSIQPRATLVSWFSCVWFSQCIPRHAFCDLAYIGGSS"
ORIGIN      
        1 atgccttcgc ctagttgggg ttggcgaaag attttgcatc ttcgtgatat tattcgagag
       61 tttatgtttc acaaggttgg aaatggaaga ttaacctcta tttggtttga ctcgtggatg
      121 gttataggac ctctgtcgtt tatttctact cgtgatatgc acagagcagc tttgtcccct
      181 gatgcttgtg tccaggatat tattgtgaac tctggtatcg cttggacaaa ctacttacta
      241 ttgaaatatc ctcttcttaa tgatattaat gttcttgttt ccgaagtcga ggatgttatt
      301 gtttggaaag tgcaagatag ttcgttgaag caattctcaa taatcctatc ttggaattcc
      361 attcagccaa gagctactct ggtgtcgtgg ttttcgtgtg tgtggttctc gcagtgtatt
      421 cctagacatg cgttttgtga cttggcttat attgggggat cgtcttaa
//
LOCUS       XM_071831487            1527 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841260), mRNA.
ACCESSION   XM_071831487
VERSION     XM_071831487.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1527
                     /gene="LOC139841260"
                     /note="uncharacterized LOC139841260; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841260"
     CDS             1..1527
                     /gene="LOC139841260"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687588.1"
                     /db_xref="GeneID:139841260"
                     /translation="MDQIDRTKWMYDIGRTSTDYLKWLEEFINIAETDQLNKGSSVII
                     CPCKKCMNGKSFKDSTDIRNHLIINGFMRGYTCWSYHGESLTDHNPCSSDSNQLNEED
                     SYISDNDNFEAMFEDIEDNVDEKYHEKFEQLKFDSKKPLYNGCTKFSKLSAVIKLLNL
                     KANNGWSDTSFTSLLELLHKMLPEDNELPVSTYYAKKLMCPMGLEIQRIHACLNDCIL
                     YRNENENLHECKVCGASRYKHGKPTDEDSDENGPPAKVLWYFPIIPRLKRLFANAKTA
                     KVLRWHAEERKKDGKIRYVADSVQWRTIDNEFEDFGNEIRNIRLGLSSVGMNPFGDLS
                     SGHSTPKQPGNNIDVYLASLIDDLKLLWDTGVQVYDSYKKEYFQLWAMLFCTINNFPV
                     YSNLSGYTTKGKKACPVCEKNTHSIWLKNCRKPAFMGHRRELAVNHPYRSKKDLFDGT
                     VEKSVLPPRSDGKTFFKMVKKLKVVLGKIGNGPPKGMWKKNPYFGNYRIGSICASEIV
                     "
     misc_feature    22..249
                     /gene="LOC139841260"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    865..1410
                     /gene="LOC139841260"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atggatcaga ttgatcggac taaatggatg tacgacatag gacggactag caccgactat
       61 ctgaaatggc ttgaagaatt tataaacatt gcggagactg atcaattaaa taaaggaagc
      121 agtgtaatca tttgtccttg taaaaaatgt atgaatggga agtccttcaa ggattctacc
      181 gatatcagaa atcatcttat aataaacgga tttatgagag ggtacacgtg ttggtcttat
      241 cacggtgaat cattaaccga tcataaccca tgctcttcag attccaatca attaaacgaa
      301 gaagattcat acattagtga taacgataat tttgaggcca tgtttgagga tattgaggat
      361 aatgttgacg aaaagtatca tgagaaattt gaacaactta aatttgactc taaaaaaccg
      421 ttatacaacg gttgtacgaa attttcaaaa ctttctgccg tgataaaact gttaaatcta
      481 aaagcaaaca atggttggag tgacacaagt ttcactagct tgttagagtt gttgcataaa
      541 atgctccccg aagataatga gttgccggtt tcaacatact atgccaagaa attgatgtgc
      601 ccgatgggat tggaaataca aagaatacat gcatgtctaa atgattgtat actatacagg
      661 aatgaaaatg aaaaccttca tgagtgtaag gtatgtggtg catctaggta taaacatgga
      721 aaaccaaccg acgaagacag tgacgaaaat ggacctcctg caaaagtatt gtggtatttc
      781 cctatcatac caagattgaa gaggttattt gcgaatgcca aaactgcaaa agtattacgt
      841 tggcatgcgg aagagcgtaa aaaggatgga aaaataagat atgtggctga ttcagttcaa
      901 tggagaacta ttgataacga atttgaagac tttgggaatg agatacgaaa tattaggttg
      961 ggacttagtt cagttggaat gaatcctttt ggagatttga gtagcggtca tagcacccca
     1021 aaacaacctg gaaacaacat tgatgtttat ttggcatcgt tgattgatga cttaaagtta
     1081 ctatgggata ccggtgtaca agtctatgat tcatacaaga aagagtactt tcaactatgg
     1141 gcaatgcttt tttgcaccat taacaatttt ccagtgtata gtaatttgtc tggatatact
     1201 acgaaaggga aaaaggcatg tcctgtttgt gagaaaaata ctcactcgat atggttgaaa
     1261 aattgtagga aaccagcatt tatgggacat agaagagagc ttgctgtgaa tcacccttat
     1321 cgctccaaaa aagacttatt tgatggtact gtagagaaaa gtgttctacc gccacgatcg
     1381 gatggaaaaa cttttttcaa aatggttaag aagctaaaag ttgtgttggg aaaaatcggt
     1441 aatggtccgc cgaaagggat gtggaaaaaa aatccatatt ttgggaatta ccgtattgga
     1501 agcatttgcg catccgaaat tgtctag
//
LOCUS       XM_071831488             843 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841261), mRNA.
ACCESSION   XM_071831488
VERSION     XM_071831488.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..843
                     /gene="LOC139841261"
                     /note="uncharacterized LOC139841261; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841261"
     CDS             1..843
                     /gene="LOC139841261"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687589.1"
                     /db_xref="GeneID:139841261"
                     /translation="MVDGEIPRSSSLGTWGNIVFARSLMEDLQVPLKNSFIKSIVDGG
                     NTLFWQEHWIENEKLCKVFPRLFRLEESPNATIKDRVSKSSNGLSTTWNWSRSPTGRT
                     AGELDNLLEMLSAYSFNQSGSDVWKWSLSSKGEYTVKACSALLDQQVLGSAASNCGTL
                     HNPLVPKKVEIFVWRVLKNRIPVRIELDKRGMDLHSVRCPLCDDALESVDHSLILCKH
                     VRDIWTRVYKWWGVGNFSGVSLSSILDDSSPLASSSFGKMIWQALKWICTYLIWKYRN
                     NKVF"
     misc_feature    <484..666
                     /gene="LOC139841261"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtggatg gtgagattcc tcgctcttca tcattaggta catggggtaa cattgttttt
       61 gcaagatcac taatggaaga tttgcaagtg ccgctaaaaa attcttttat caaatcgata
      121 gtagatggcg gtaatacatt gttttggcaa gaacattgga ttgagaacga aaaactttgt
      181 aaagtgttcc cacgtttgtt tcgtcttgaa gaatctccaa atgcaacaat caaagataga
      241 gttagtaaga gtagtaacgg cttatctaca acatggaatt ggtcccgtag tcctaccgga
      301 agaactgcag gtgagctcga caacctactt gagatgctgt cagcctattc atttaatcag
      361 tctggttcag atgtttggaa atggagctta tcgtcaaaag gtgaatacac tgttaaggcc
      421 tgttcggctc ttctagatca gcaggtcctc gggtcagcag cttcaaattg tggtacgctc
      481 cataaccctc ttgtccctaa aaaagttgaa atattcgttt ggcgggtgtt aaaaaataga
      541 attcccgtta gaatagaatt ggacaaaagg ggtatggatc ttcatagcgt gaggtgccct
      601 ttatgtgatg atgcccttga gtcggtggat cactccctca tcctttgtaa acacgtacgt
      661 gacatttgga ctcgggttta taaatggtgg ggagtaggaa acttctcggg ggtatcctta
      721 tcgtccatac tagatgattc ttcacccttg gcatcttcga gttttgggaa aatgatttgg
      781 caagcgttaa aatggatatg cacctatctt atttggaaat accggaataa caaagttttt
      841 tag
//
LOCUS       XM_071831489             984 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841262), mRNA.
ACCESSION   XM_071831489
VERSION     XM_071831489.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 50% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..984
                     /gene="LOC139841262"
                     /note="uncharacterized LOC139841262; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841262"
     CDS             1..984
                     /gene="LOC139841262"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687590.1"
                     /db_xref="GeneID:139841262"
                     /translation="MWPYRRQSNNYDNDNNNNNNACTSPKIRRIPSNPDFNPHSLKNI
                     ETLISSDDRINSQLDTIVEEYHEPSSTFSPQIRSAPCMGPTKPSIFHRVHLANRFSRL
                     FTPRPRPEEILSESIKQDEISPKSNKSDDIFSSESNRSEQPENLDDVKNVVKPETFVT
                     PRPRINVPGGEKRVVVYMTSIRAVRPTFEACRTVRSILQGFRVPIDERDLCMDASFSD
                     EIKKIMRQMGQAGFGDKRITLPRVFIGGRYIGGADEVVELHEIGELKKFVSGLPAVTG
                     GVCESCGGFRFILCYECNGSHKCYIDDHGGFRTCLECNENGLIRCPSCSCS"
     misc_feature    517..963
                     /gene="LOC139841262"
                     /note="Glutaredoxin (GRX) family, GRX-like domain
                     containing protein subfamily; composed of uncharacterized
                     eukaryotic proteins containing a GRX-like domain having
                     only one conserved cysteine, aligning to the C-terminal
                     cysteine of the CXXC motif of GRXs. This...; Region:
                     GRX_GRX_like; cd03031"
                     /db_xref="CDD:239329"
     misc_feature    order(535..537,562..570,712..717)
                     /gene="LOC139841262"
                     /note="putative GSH binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:239329"
     misc_feature    571..573
                     /gene="LOC139841262"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239329"
ORIGIN      
        1 atgtggcctt accggagaca atccaacaat tacgataatg ataacaataa caacaacaac
       61 gcttgtacta gtccgaaaat tcgtagaata ccatccaacc ccgatttcaa tcctcattcg
      121 ctaaagaata ttgaaactct catatctagt gatgatcgaa taaattcaca attagataca
      181 atcgttgaag aatatcatga accgtcatca actttttccc cacaaattcg ttccgccccg
      241 tgcatgggcc ccacaaaacc ttccattttt caccgtgtcc acctggctaa ccgcttttcc
      301 cgccttttca ccccgaggcc aagaccagaa gaaattttat cagaatcaat taaacaagac
      361 gaaatctcac caaaatcaaa taaatcagac gatatattct catcagaatc gaatagatca
      421 gaacaacctg aaaatttgga cgatgttaaa aatgtggtga agcctgagac attcgttaca
      481 ccccgcccgc ggataaatgt cccgggagga gaaaaacgag tagtcgttta catgacaagc
      541 attcgtgcgg tccggcccac ttttgaagcg tgcaggaccg tacgatcaat tttacaagga
      601 tttcgtgtac ccattgacga acgagacttg tgtatggacg catcatttag tgatgaaata
      661 aaaaagataa tgcgccaaat gggtcaagca ggatttggtg acaaaaggat aacattacct
      721 agagtgttta taggtggccg gtacatcggt ggggccgatg aggtggttga gttgcatgaa
      781 attggtgaat tgaagaagtt tgtatccgga ttaccggctg tgaccggtgg agtttgtgaa
      841 agttgtggtg ggttccggtt tatattgtgt tatgaatgta atggaagcca taaatgttac
      901 atagatgatc atggtggatt tagaacatgt ttggagtgta atgaaaatgg tcttatcagg
      961 tgtccatctt gttcttgtag ttaa
//
LOCUS       XM_071831490             678 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841263), mRNA.
ACCESSION   XM_071831490
VERSION     XM_071831490.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..678
                     /gene="LOC139841263"
                     /note="uncharacterized LOC139841263; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841263"
     CDS             1..678
                     /gene="LOC139841263"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687591.1"
                     /db_xref="GeneID:139841263"
                     /translation="MNLQGVDWVIGGDFNEHYQFTRINDDGVKFSKLDRFLVSEGFLH
                     TWGDISTIALERKTLDHYPLVLRDKNNDFGPKPFRIFDIWLENKEVELVITTAWNKKV
                     VGNRPDCVFRNRLKNVKEALRVWSKKKYGTIDEEIDSWKKKADEYESKANLGPLTEED
                     RVEWMSVRNKWFQKENEKTEMLRQKARLKWIAEGDDNTSYFHASIKRRNLMIVHYTFL
                     VICKLEE"
ORIGIN      
        1 atgaatctgc aaggtgttga ttgggtcatc gggggtgatt tcaatgaaca ttatcaattt
       61 accagaatca atgatgatgg cgtgaagttt agtaagcttg atcgtttcct tgtatccgaa
      121 ggcttcctac atacctgggg cgatatctcc acaatcgcgc ttgagagaaa aacgttggat
      181 cattatccat tggtcctcag agataaaaat aacgactttg ggcctaaacc atttagaatc
      241 tttgacatat ggctcgaaaa taaagaagta gaacttgtta ttaccacggc ctggaataaa
      301 aaggtagtag gtaatcgtcc tgactgtgtg ttccgtaata ggttaaaaaa tgtcaaagaa
      361 gctcttaggg tttggagtaa gaaaaaatat gggaccattg atgaggagat agactcgtgg
      421 aaaaagaaag cagatgaata tgaatcgaaa gctaatttag gtccattaac agaggaggat
      481 cgggttgaat ggatgagtgt gagaaataaa tggttccaaa aagaaaatga aaaaacagag
      541 atgcttaggc aaaaggcacg attaaagtgg attgcggaag gtgatgataa tacttcttac
      601 tttcatgcct caattaagag aagaaatctc atgattgtgc actacacttt tctggtaatc
      661 tgtaaattag aggagtaa
//
LOCUS       XM_071831491             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841264), mRNA.
ACCESSION   XM_071831491
VERSION     XM_071831491.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139841264"
                     /note="uncharacterized LOC139841264; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841264"
     CDS             1..504
                     /gene="LOC139841264"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687592.1"
                     /db_xref="GeneID:139841264"
                     /translation="MCNNLIPQKIGIFIWRALLRRIPVRVELNKRGIDLASLRCPVCD
                     DDIETVDHILLNCSFAKDIWDRLYRWWNMGNLMHTNLEDLFKGINKATSSSSSKLWQA
                     VVWICGYLIWQNKNSTIFRNYKGNGPVLLNEIQIKAYEWISKRSNKFKLDWNQWLINP
                     SSFDDHG"
     misc_feature    <7..189
                     /gene="LOC139841264"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtgcaaca acttgatacc acaaaaaata ggtatcttta tttggcgagc attgttaaga
       61 aggatccccg ttcgtgtgga gctcaataag agaggcattg atctagcctc gttaagatgc
      121 cccgtttgtg atgacgacat tgaaacagtt gaccatattc ttctaaattg ctcatttgca
      181 aaggacattt gggatcgact ctatcgatgg tggaacatgg gtaatttgat gcacacaaat
      241 ttggaagatc tttttaaggg cataaacaaa gcgacttcat cctcatcttc aaagctttgg
      301 caagccgtcg tatggatttg cgggtatttg atatggcaaa ataagaactc aacaatattt
      361 cgaaattaca aaggaaatgg tccggtgctt ctcaatgaga ttcaaatcaa agcatatgaa
      421 tggatatcaa aacgctcgaa taagttcaag ctagattgga atcaatggct cataaacccc
      481 tcttctttcg atgatcacgg ctaa
//
LOCUS       XM_071831492             582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841265), mRNA.
ACCESSION   XM_071831492
VERSION     XM_071831492.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..582
                     /gene="LOC139841265"
                     /note="uncharacterized LOC139841265; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841265"
     CDS             1..582
                     /gene="LOC139841265"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687593.1"
                     /db_xref="GeneID:139841265"
                     /translation="MSKMIDDRLLQSYVSASETMNNNLVPKSLGIFAWRIKKKRIPVR
                     VKLDKRGLDLNTIRCPVCDDSLETVEHSMIFCKVARDTWDRVYKWWGLGNFNTFSVDE
                     ILNGDGINISSKDRKIWQAVEWVCGYLLWKNRNHKVFRNKDWTSAMIFNEVQIKSYEW
                     ISKRLKSKLIEWHQWLVNPSSYCCSSSPRTGVG"
     misc_feature    <91..240
                     /gene="LOC139841265"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtctaaaa tgattgatga caggctgctt caatcttatg taagtgcttc agaaaccatg
       61 aataataatc tagtacccaa atcattaggc atctttgcgt ggagaattaa aaagaaaaga
      121 attccggtac gagttaagct cgataaaagg ggtttagatc ttaacactat tcgatgcccg
      181 gtatgtgatg actccttgga aactgttgaa cattcaatga tcttttgcaa agtagcaaga
      241 gatacgtggg atagggtgta taaatggtgg ggacttggta acttcaacac atttagtgtc
      301 gacgagatcc ttaacggtga cggaatcaac atctcgagta aagataggaa gatatggcaa
      361 gccgtagaat gggtttgcgg gtatctacta tggaaaaatc gaaatcataa agtcttcagg
      421 aataaagatt ggacgagtgc aatgattttc aatgaggtcc aaatcaagag ctatgaatgg
      481 atttctaaaa ggcttaaatc gaagttaatc gagtggcatc aatggttggt taacccaagc
      541 tcttattgtt gttcgagtag tcctagaact ggagtgggct ga
//
LOCUS       XM_071831493            2367 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841266), mRNA.
ACCESSION   XM_071831493
VERSION     XM_071831493.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2367
                     /gene="LOC139841266"
                     /note="uncharacterized LOC139841266; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841266"
     CDS             1..2367
                     /gene="LOC139841266"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687594.1"
                     /db_xref="GeneID:139841266"
                     /translation="MGLSNEECLDNLLDDATSGPKQLHRSNHKVNDLSDNTKRLGSDG
                     FDQCNQAAISRKPRKSSLVENHSISIGSIWRRVGNWKASSRILHAKNIAKRIHNHPNF
                     KTKVQKTSSPKTNKKDNSFDVPIRNTSRASAISTRKANCRKSSSKNIGLEEFESLNSE
                     GFKREGKIGWFKGICAETYPEVVAIHETKCNSVTDAWIKDLDFNEIRGQEERKNCIFI
                     DRRASLFNNFIEKMQLIEVPLIGKRYTRTCDNGVKLSKLDRFLVSEQLANRWGELSAM
                     VFDRNLSDHCPVLLRANNVYFRPKPFKIFDTWLDHKDVDNIICNAWNITMDGNKPDII
                     FRKRLKNVKEELRAWSKKQFEKIDQDIETLKDAVKNWERLMEERDLDDNERELSLNTR
                     KLWLEKESEKSNMLKQKSREENPATIKEEVLSYFSNIFKEGNYERKKVASPVYNSITS
                     DDAHFLEQPFCEDEIWNAIIGCESSKPPAPDGFSFKFFKKYWELIKDDLMRAMCWFWE
                     KSEISHGCNASFLSLIPKKKDPQDLGDYRPISLIESDYKIIDKSAFISEKSILDGILI
                     LNEAIVDLKTRREKCFIFKVDFSKAFDSVNWEFLLDTMQSMRFGVKWWRWIESCLKSA
                     LVSILVNGSPTREFKLGRGIRQGDPLSPFLFLIVGEGLNFLTKVAINNGLYKGVKIGN
                     DSIPFSHLQYAVDTIFIGEWSTRNINNTMKLLKCYEEVSGLSINIAKCSLYGIGVLST
                     ASETMASLLNCKNGSFPLTYLGLPVGAKMKNVMEWDLVMKKFQKRFSE"
     misc_feature    <682..873
                     /gene="LOC139841266"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    1552..2295
                     /gene="LOC139841266"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1759..1776,1936..1941,2074..2076,2080..2085,
                     2281..2286)
                     /gene="LOC139841266"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1759..1776,1936..1938,2080..2082)
                     /gene="LOC139841266"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1939..1941
                     /gene="LOC139841266"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atggggcttt caaatgagga gtgtttggac aacttactgg atgatgcaac atcaggccca
       61 aaacaacttc atcgttcaaa tcataaggta aatgatctat cagataacac taagcggtta
      121 gggtctgatg gttttgatca atgcaatcaa gcagcaattt cgagaaaacc tcgcaaatct
      181 tcattggtcg aaaatcatag tatctcgatt ggctcgattt ggagaagggt gggcaattgg
      241 aaagcttcct cgagaatcct acacgctaaa aatattgcaa agcgaattca caaccacccg
      301 aatttcaaga caaaggtaca gaaaacttca tctccaaaga caaataagaa ggataacagt
      361 tttgatgttc caattagaaa tacttcgaga gcttcggcaa tcagtacacg gaaagccaac
      421 tgcaggaagt cgagctcaaa aaatattggt ttagaggagt ttgaatcatt gaatagtgaa
      481 gggttcaaga gggaagggaa gataggttgg tttaaaggaa tttgtgctga aacataccct
      541 gaagtggttg caatacatga gacgaaatgt aattcggtca cagacgcttg gataaaggat
      601 ctcgatttta acgagattag aggtcaagag gaaaggaaaa attgtatctt tatagatcga
      661 agagctagct tgttcaataa tttcatagag aagatgcagc tgattgaagt tcctttaata
      721 ggaaaacgat acacaagaac ttgtgataat ggtgtaaaac tcagcaagct tgatcgcttt
      781 ttagtgtcag aacaattagc caacagatgg ggggaattat cagctatggt tttcgatagg
      841 aatctatccg accactgtcc ggttcttttg cgtgctaata acgtttattt cagacctaaa
      901 cctttcaaaa tattcgatac gtggcttgat cataaggatg tggacaatat tatttgtaac
      961 gcatggaata taacgatgga tggaaataag cctgatatta ttttccgaaa gcggttgaaa
     1021 aatgttaaag aagagctacg ggcatggagt aaaaagcagt ttgaaaagat cgaccaagat
     1081 attgaaacac tcaaggatgc tgttaagaat tgggaaagat taatggagga acgtgacttg
     1141 gacgataatg aaagggagtt gtcattgaat actaggaagc tgtggctgga gaaagaaagt
     1201 gagaagagca acatgctaaa acaaaaatcg agagaagaga atccggccac aattaaggag
     1261 gaggttttgt catatttcag caacatattt aaggaaggaa actatgagag gaagaaagtg
     1321 gcaagtccag tttacaattc gatcacttct gatgatgcac actttctcga gcaacccttc
     1381 tgtgaggatg aaatatggaa tgctatcata ggatgtgaaa gctctaaacc tcccgcgcca
     1441 gacggtttca gttttaaatt ctttaaaaaa tactgggagt taataaaaga tgatcttatg
     1501 agggctatgt gttggttttg ggagaaaagc gaaatttctc acggttgtaa cgcttcgttc
     1561 ttatcgctta tccctaaaaa gaaagacccg caagatcttg gcgattatcg accgatcagc
     1621 ctaatcgaaa gcgactataa gattattgat aagagtgctt ttattagtga aaaatcgatt
     1681 ttggatggca ttctgatcct aaatgaagcc atagttgatt taaaaactcg acgggaaaaa
     1741 tgtttcatct tcaaagtaga tttttctaag gcttttgaca gtgtgaattg ggaatttctt
     1801 ttggacacga tgcaaagtat gagattcggg gtgaagtggt ggaggtggat tgagtcgtgc
     1861 ttaaagtcag ccttagtttc tattctcgtt aatggctcac ctactagaga attcaagctc
     1921 gggcgcggaa ttagacaagg tgatcctctc tccccatttt tatttctaat tgtaggagaa
     1981 ggattgaatt tccttacaaa ggtggctatt aacaatgggc tctacaaagg tgttaaaatt
     2041 ggtaatgatt cgattccatt ttcacatcta caatacgcag tcgatacgat ctttattgga
     2101 gagtggtcca cacgaaacat aaataacacc atgaaacttc tcaaatgtta cgaagaagtc
     2161 tcgggcttat caatcaacat cgctaagtgc agcctctatg gcattggggt cttgagcacc
     2221 gcttccgaga ctatggcttc tctcctaaac tgtaagaacg ggagctttcc tttaacgtat
     2281 ttaggtttac cggttggtgc aaaaatgaag aatgtaatgg agtgggattt ggtcatgaaa
     2341 aaatttcaaa aaagattttc agaatag
//
LOCUS       XM_071831494             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841268), mRNA.
ACCESSION   XM_071831494
VERSION     XM_071831494.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139841268"
                     /note="uncharacterized LOC139841268; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841268"
     CDS             1..645
                     /gene="LOC139841268"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687595.1"
                     /db_xref="GeneID:139841268"
                     /translation="MRNVGALNYDKRSSGYECGKPGHFRDTCPDKKKTAENVCGKAFN
                     INARDAEEDPKLVTGMCSVNDLSIYVLFDSGADLSFLSNKFSPKIKTPLTPLDIIYAV
                     EVANGKVLTAMTVYRKCNIRLADRDFEVDLVPIELGIFDVVIGMDWLSENRAEIVYYE
                     KAVRCHDILAHVVESDKEEKKIDDVRVVRDFSEVFPEDLPGLPVTTQPVIQPNT"
     misc_feature    118..489
                     /gene="LOC139841268"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(217..219,223..225,229..231,304..312,427..429)
                     /gene="LOC139841268"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    217..225
                     /gene="LOC139841268"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    217..219
                     /gene="LOC139841268"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(304..315,325..336)
                     /gene="LOC139841268"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgagaaacg tgggggctct aaattacgat aaacgtagta gtggttatga gtgtgggaag
       61 cctggacact ttcgtgatac gtgtcctgat aagaagaaaa cagctgagaa cgtgtgtggt
      121 aaagcgttca atattaatgc cagagatgca gaggaagacc caaaacttgt tactggtatg
      181 tgttcggtca atgatttatc gatttatgta ctttttgatt ccggggctga tttaagtttt
      241 ttgtccaata aatttagtcc taaaatcaaa actccgttaa ctcctttaga cataatttat
      301 gctgtagagg tagctaatgg taaggtgctt actgctatga ccgtgtaccg taagtgtaat
      361 attagactgg ctgatagaga ctttgaggta gacttagtgc cgattgagct aggaattttt
      421 gatgttgtta ttggtatgga ttggttatcc gagaatcgtg ccgaaatcgt ctattatgag
      481 aaagctgttc gctgtcatga tattctggcc catgtagtgg aatcagacaa agaagagaag
      541 aaaattgatg atgttcgtgt cgttagagat ttttctgaag tatttcccga ggatttacct
      601 ggacttcctg taacgaccca acccgttatt caaccgaata cgtga
//
LOCUS       XM_071831495             471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841270), mRNA.
ACCESSION   XM_071831495
VERSION     XM_071831495.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..471
                     /gene="LOC139841270"
                     /note="uncharacterized LOC139841270; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841270"
     CDS             1..471
                     /gene="LOC139841270"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687596.1"
                     /db_xref="GeneID:139841270"
                     /translation="MNRALKRILKRTVGHHGNTWAEKLDDALWAFRIAYKNPLETGRY
                     RKMQMNELAELRDQEYKTYYIYKERIKLLHDAKLIPTNFSPGDKVLLFKSCFKRFFGK
                     FKSRWIGPFTVIHVFPHGAVELEGPTNFKVNGHRLKVYLEDHTREEDPLSLEPP"
ORIGIN      
        1 atgaatagag cacttaaaag aattttgaaa cgtaccgtcg gccaccatgg aaatacgtgg
       61 gccgagaaac tagacgatgc tctatgggca tttcgtattg cctacaaaaa cccacttgag
      121 actggtagat atcgcaagat gcagatgaat gaactcgccg aattaagaga ccaagagtac
      181 aagacttatt acatctacaa ggaacgaatc aagcttttac acgatgcaaa actcatacct
      241 acaaatttct ctcctggaga taaagttcta cttttcaaat cgtgtttcaa aaggttcttt
      301 ggtaagttta aatcaagatg gattgggccg tttacagtga tacatgtctt tccacatgga
      361 gccgtagaat tagaaggacc tactaacttt aaagttaacg gacacagact taaagtttat
      421 ttagaagacc acaccaggga agaagaccct ctctcccttg agccaccatg a
//
LOCUS       XM_071831496             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841271), mRNA.
ACCESSION   XM_071831496
VERSION     XM_071831496.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139841271"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841271"
     CDS             1..783
                     /gene="LOC139841271"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687597.1"
                     /db_xref="GeneID:139841271"
                     /translation="MPVDAKSKQGANAGNPYSDPSYFRSLAKALQYLTFTRPDISYAV
                     QQICLHMHDPRDGHMASLKRILRYIQGTLHYVLHLHKSPAHTLISYTDADWAGCPDTR
                     RSTFGYCVYYGDNLISWSSKRQPTLSRSSAEAEYHGVANVVSESCWLRNLLLELHRPI
                     HKATIVYCDNVSAIFLSSNPIQHQRTKHIELDIHSVREKVTKGQVRVLRFYFKIFVPV
                     STSVFLPFRLRGTIRQHLIAKEYVLAKELVSFYKQYVSRTIV"
     misc_feature    268..621
                     /gene="LOC139841271"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(274..285,388..396,403..405,505..507,583..585)
                     /gene="LOC139841271"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgccagttg atgctaagtc gaaacaaggg gccaatgctg gaaacccata ttccgatcct
       61 tcttatttta gaagcttagc caaggctttg caatacttaa cttttactcg tcccgacata
      121 tcctacgcag ttcaacaaat atgccttcac atgcatgacc cacgcgatgg acacatggca
      181 tcattaaaac gtattcttcg gtacattcaa ggaactcttc attatgtctt acaccttcat
      241 aagtcgcctg cacacacact tatttcctac actgacgctg attgggccgg gtgtccagac
      301 acacgtcgtt ctacttttgg atattgtgtc tattatggtg acaatcttat ttcatggtca
      361 tccaagcgac aacccactct atcccgttct agtgccgaag ccgaatatca tggagttgca
      421 aatgttgtat cggaatcttg ttggctacgc aatttactac tcgagttaca tcgtcccatt
      481 cacaaagcta ctattgtgta ttgtgacaat gttagtgcta tttttctctc cagtaatcct
      541 attcaacatc agcgcactaa acatatcgaa ctcgacattc actctgtacg agaaaaggtc
      601 accaaaggtc aagtccgcgt gctacggttt tatttcaaga ttttcgtgcc agtctcaaca
      661 tctgtgttcc tcccgtttcg actgcggggg actattagac aacatttgat agccaaggaa
      721 tacgtattag ccaaggaact tgtttccttt tataaacaat atgtatctag aactattgta
      781 tag
//
LOCUS       XM_071831498             432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841272), mRNA.
ACCESSION   XM_071831498
VERSION     XM_071831498.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..432
                     /gene="LOC139841272"
                     /note="uncharacterized LOC139841272; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841272"
     CDS             1..432
                     /gene="LOC139841272"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687599.1"
                     /db_xref="GeneID:139841272"
                     /translation="MLKVSPWKSVERFGKRGQLSPRYVGPFEITERVGPVAYRLNLPQ
                     ELSEIHDTFHVSNLKKCLSGENLIIPLEEIQVDSKLHFVEEPVEIMDREVKHLKQSNM
                     PIVKVWWNACRGLEFTWESEDQMKQKYPQLFSNETNPANVH"
ORIGIN      
        1 atgctgaaag tatcaccttg gaaaagtgta gaacgttttg ggaaacgagg ccagttaagt
       61 ccaaggtacg ttggaccatt cgagatcact gaacgggttg gacccgtagc ttatagatta
      121 aatctacctc aagagcttag cgagattcat gatacgtttc acgtgtcaaa cttgaagaag
      181 tgcttgtcag gtgagaatct gataattcct ttggaagaga tacaagttga tagtaaactt
      241 cacttcgtgg aggaacctgt tgagatcatg gaccgtgagg ttaaacattt aaagcagagc
      301 aacatgccga ttgtgaaagt ttggtggaac gcatgcagag gactagagtt cacgtgggaa
      361 agtgaagacc agatgaagca aaagtatccg caactgtttt cgaacgagac aaatccagcg
      421 aacgtgcact aa
//
LOCUS       XM_071831499             711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gamma-interferon-responsive
            lysosomal thiol protein-like (LOC139841273), mRNA.
ACCESSION   XM_071831499
VERSION     XM_071831499.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..711
                     /gene="LOC139841273"
                     /note="gamma-interferon-responsive lysosomal thiol
                     protein-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139841273"
     CDS             1..711
                     /gene="LOC139841273"
                     /codon_start=1
                     /product="gamma-interferon-responsive lysosomal thiol
                     protein-like"
                     /protein_id="XP_071687600.1"
                     /db_xref="GeneID:139841273"
                     /translation="MQVTRLQSVTGLSYTVAMCNRTGTGCIRTLQKVKLTLYYEALCP
                     ASEEFVVNHLYKIFENGLISIIDLKFSPYGNAKISSNGTIVCQHGEWECLLNAVEACA
                     IHAWPHVSDHFMIIHCLESLCHEDKYAQWRTCFKKLNLNPKPVDDCQTSGLGHKLELE
                     YADEIKALKPPHKFVPWVVVNEQPLNEEYEDFMSYICKAYKGTNVPHACKGLTDPIVV
                     YKDNVKPLNRQVSFNEED"
     misc_feature    106..408
                     /gene="LOC139841273"
                     /note="Gamma interferon inducible lysosomal thiol
                     reductase (GILT); Region: GILT; pfam03227"
                     /db_xref="CDD:460853"
ORIGIN      
        1 atgcaggtta cacggttgca gagtgtaacc ggattgtctt atacggttgc aatgtgtaat
       61 cggacgggta caggatgtat ccgtacgctc caaaaagtga agctgacatt atactacgaa
      121 gcattgtgtc cagcaagtga agaattcgtg gttaatcatc tatacaagat ttttgaaaat
      181 ggtctgattt cgataattga tctcaaattt agtccctatg ggaacgctaa gattagttcg
      241 aatggcacca tcgtttgtca gcatggtgaa tgggagtgtt tgcttaatgc tgttgaggct
      301 tgtgcaattc atgcatggcc tcatgtgagt gaccacttta tgattatcca ttgtcttgaa
      361 agtttatgcc atgaagacaa gtacgcgcaa tggagaactt gttttaaaaa gttaaatttg
      421 aacccgaaac ctgttgacga ttgtcaaact agtggtcttg gacataagct tgagctagaa
      481 tacgcggacg aaataaaggc tcttaaacct cctcataagt ttgttccatg ggtcgtcgtt
      541 aatgaacaac cacttaacga agagtatgaa gatttcatga gctatatatg caaagcttat
      601 aaaggcacaa atgtgccaca tgcatgcaaa ggtttaactg accccattgt cgtttacaag
      661 gacaacgtga aacctttaaa tcgtcaagta agcttcaatg aagaagatta a
//
LOCUS       XM_071831500             792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gamma-interferon-responsive
            lysosomal thiol protein-like (LOC139841274), mRNA.
ACCESSION   XM_071831500
VERSION     XM_071831500.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..792
                     /gene="LOC139841274"
                     /note="gamma-interferon-responsive lysosomal thiol
                     protein-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139841274"
     CDS             1..792
                     /gene="LOC139841274"
                     /codon_start=1
                     /product="gamma-interferon-responsive lysosomal thiol
                     protein-like"
                     /protein_id="XP_071687601.1"
                     /db_xref="GeneID:139841274"
                     /translation="MFRSNLLLVIVIVSLAANLSTSVSLLSSNEQKVKLALYCEALCP
                     TSASFIINYLYKIIENGLISIVDLELSPYGNAKISANGTIVCQLGEWECMLNTVEACA
                     IQTWPSVSDHFPFVYCIEKLAYENKYTEWETCFEKLNLDPKPVADCYGSGFGYELELQ
                     YAQETKMLQPAHTYVPWGVVDGQPLYDDFTEFISYICKAYKGSNVPNACLDVSHPIGA
                     PKNAKPRNDECYKDEENAKSRSTLLEIILAIVASWMPNVGTADSM"
     misc_feature    106..408
                     /gene="LOC139841274"
                     /note="Gamma interferon inducible lysosomal thiol
                     reductase (GILT); Region: GILT; pfam03227"
                     /db_xref="CDD:460853"
ORIGIN      
        1 atgttccgat caaatttgct actagtaatt gtaatcgtgt cgttagctgc aaatctctcc
       61 acctcggtat cgttgttgtc atcgaacgag caaaaagtga agttggcgtt atattgtgaa
      121 gctttgtgtc cgacttctgc gagtttcata atcaactatt tgtataagat tattgaaaat
      181 ggactaattt cgatagttga tcttgagctt agtccttatg gaaatgcaaa gataagtgcc
      241 aatggcacca ttgtttgcca gcttggtgaa tgggagtgta tgcttaatac tgttgaggcc
      301 tgtgcaattc aaacctggcc atctgtaagt gaccacttcc catttgtgta ttgcatcgaa
      361 aaactggctt atgaaaacaa gtatacagaa tgggaaacgt gttttgagaa gctaaatttg
      421 gacccaaaac ctgttgcaga ttgttatggt agtggttttg gatatgagct tgagctacaa
      481 tatgcacaag aaacaaaaat gctacaacct gctcatactt atgttccatg gggggttgtt
      541 gatggacaac cgctttacga tgatttcaca gaattcataa gctacatatg taaagcttat
      601 aaaggctcga atgtgcctaa tgcgtgcctc gatgtatctc accccattgg tgctccaaag
      661 aacgcaaaac ctaggaatga tgagtgttac aaagatgaag aaaacgcgaa gtcaaggtca
      721 acccttttgg aaatcatctt agcaatagta gcttcttgga tgcccaatgt tggcacggca
      781 gattccatgt aa
//
LOCUS       XM_071831501             450 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841275), mRNA.
ACCESSION   XM_071831501
VERSION     XM_071831501.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..450
                     /gene="LOC139841275"
                     /note="uncharacterized LOC139841275; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841275"
     CDS             1..450
                     /gene="LOC139841275"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687602.1"
                     /db_xref="GeneID:139841275"
                     /translation="MGNSLRCCLSCLIPCGALDLIRIVHLNGYVEEITRPVTAGEVLK
                     NHPNYVLSKPTSQGVVRRILILSNSSELKRGSIYFLIPASSVPENKRKPRNKENVVKI
                     KTVTGDQLCVSGGVVVEKKVARRKARRSVDSGGGDWQPHLESIFEEQ"
     misc_feature    1..441
                     /gene="LOC139841275"
                     /note="PADRE domain; Region: PADRE; pfam14009"
                     /db_xref="CDD:464065"
ORIGIN      
        1 atgggaaata gtctaagatg ttgtttatca tgtctaattc catgtggagc actggatttg
       61 atccgaattg ttcatttaaa tggctacgtt gaagagatca cacgtccggt tacagcaggc
      121 gaggttttaa aaaaccaccc gaattatgta ctaagtaaac caacatcaca aggtgtagtt
      181 aggcggattc ttattttatc aaatagttct gaattaaaaa gaggtagtat ttatttttta
      241 atcccggctt cttctgttcc tgagaacaaa agaaaaccga gaaataaaga aaatgtggtg
      301 aaaattaaga cggtgacggg tgatcaattg tgtgtttctg gcggtgttgt ggtggagaaa
      361 aaggtagctc gtcggaaagc tcgccggagt gttgatagtg gtggtggtga ttggcaacct
      421 catcttgaaa gcatctttga agaacaataa
//
LOCUS       XM_071831502             495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides wound-induced protein 1-like
            (LOC139841276), mRNA.
ACCESSION   XM_071831502
VERSION     XM_071831502.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139841276"
                     /note="wound-induced protein 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841276"
     CDS             1..495
                     /gene="LOC139841276"
                     /codon_start=1
                     /product="wound-induced protein 1-like"
                     /protein_id="XP_071687603.1"
                     /db_xref="GeneID:139841276"
                     /translation="MTNQHNQEEGNRNMVQNFYKALASNDATTIHHLLAPNIEWWFHG
                     PPSCNRLMALLSGCTTTTTANNEDNYISFNPISVVSIGSMVVAEGYHFLASHKVIWVH
                     AWTINEGAITQVREYFNTSVTVTRFAKSTSVHVGSQGFNKCQCVWQSKLTDNASMPGL
                     LLAV"
     misc_feature    217..492
                     /gene="LOC139841276"
                     /note="Wound-induced protein WI12; Region: WI12; cl42057"
                     /db_xref="CDD:477929"
ORIGIN      
        1 atgactaatc aacataacca agaagaaggc aaccgaaata tggtacaaaa cttctacaaa
       61 gcattagctt ccaacgatgc caccaccatc catcatctcc tggctcccaa catcgaatgg
      121 tggtttcacg gtcctccatc atgcaaccgc cttatggcgt tgctctccgg ctgtaccacc
      181 acaaccaccg ctaataacga agataattac atttctttta acccaatctc cgttgtttcg
      241 attgggtcaa tggtggtggc tgaaggctac cattttctcg cgagccataa agtcatttgg
      301 gtgcatgcgt ggacgatcaa tgaaggggct ataactcagg tgagagaata cttcaatact
      361 tcggttacgg tcacccgttt tgccaagtca acaagtgtcc acgtgggatc acaggggttt
      421 aacaagtgtc agtgtgtgtg gcagagtaaa ctcactgata atgcatctat gcctggtctt
      481 cttcttgcgg tttaa
//
LOCUS       XM_071831503             819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841278), mRNA.
ACCESSION   XM_071831503
VERSION     XM_071831503.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..819
                     /gene="LOC139841278"
                     /note="uncharacterized LOC139841278; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841278"
     CDS             1..819
                     /gene="LOC139841278"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687604.1"
                     /db_xref="GeneID:139841278"
                     /translation="MEEVSRDFPPPKPMKPRFEVDQSQYCIFHEDKGHDVDDYQELKK
                     IIIERLKLGEFNPLKPSNKGGSTTRKFAWKKGKDKAPEKHIHMIQMWHSGHVRKAKAL
                     EEWECAPITFPAFWKVCPKNLPLTVTAKLGRCRVSRIYIDTDSAVDVIYTHYFLQLPQ
                     DVWDKVKPSLHPVAGFTGETTWPLGCLSIEVKLGDDHRSCTVQLTFVVVRSQSKYNVI
                     LGRTTLQELGAIPSTVHGMLKFPTMAGVVTLFSDRAPVCAEVSQPVIQTTPIKQ"
     misc_feature    421..675
                     /gene="LOC139841278"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(424..426,430..432,436..438,517..525,652..654)
                     /gene="LOC139841278"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    424..432
                     /gene="LOC139841278"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    424..426
                     /gene="LOC139841278"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(517..528,538..549)
                     /gene="LOC139841278"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggaagaag taagcagaga tttcccgcca cccaaaccca tgaagccacg cttcgaggta
       61 gaccaaagcc aatactgcat tttccacgag gataagggac atgacgtcga cgactaccag
      121 gaactgaaga agattatcat tgaacgactt aagctagggg agtttaaccc tttgaaacct
      181 tcaaacaaag gaggttccac aactagaaag tttgcatgga aaaaaggtaa agataaagca
      241 cctgaaaaac acattcacat gatacaaatg tggcattcag gtcacgttag gaaagccaaa
      301 gcgctagaag aatgggaatg tgcaccaatc acgttcccag cattttggaa agtctgtccg
      361 aagaacttac ctttaacagt cactgctaag ctcggacgct gtcgcgtatc acgaatctac
      421 attgatacgg atagcgctgt agatgttatc tacacacatt attttttgca gttaccacag
      481 gacgtgtggg ataaggttaa accgtcgttg caccccgtcg cgggatttac aggtgaaaca
      541 acttggcctt tgggatgttt aagtattgag gtaaagttag gagatgatca ccggtcttgt
      601 accgtacagc tgacgtttgt ggtggttcgt agccaatcca agtacaacgt gattctagga
      661 cgaacaacgt tacaagagtt gggcgccata ccttctacgg ttcatggaat gttgaaattc
      721 cccaccatgg caggcgttgt aactttattt tcggatcgcg ccccagtttg cgctgaggtt
      781 agtcaacctg ttattcagac gacacccata aaacagtag
//
LOCUS       XM_071831504             801 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At4g26485-like (LOC139841279), mRNA.
ACCESSION   XM_071831504
VERSION     XM_071831504.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 74% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..801
                     /gene="LOC139841279"
                     /note="uncharacterized protein At4g26485-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139841279"
     CDS             1..801
                     /gene="LOC139841279"
                     /codon_start=1
                     /product="uncharacterized protein At4g26485-like"
                     /protein_id="XP_071687605.1"
                     /db_xref="GeneID:139841279"
                     /translation="MAYQLFIIPSATPGCSIYVVIDGGAPKMRVGLTPDAPRLLSCRA
                     VFQTQALSASSHGEGQSILLVGEADFSFSMCVAKSLGQGQNITATSLNTKDEWEKMFS
                     KAKPNIQVLKRLTATVIPRVDATKMAQHPGFKAPNVNATKPTLLKFQRIVFNFPHAGF
                     VKGSNEADEDMISRHQELVSGFLKNAYEMLTEDGEVHVRHHSAEPFKRWKVVDLAKKV
                     GLHFREQKPFNLAAYPHYTPKKGAGNDPDGPLTLHKPSLFRFDQLDQA"
     misc_feature    187..720
                     /gene="LOC139841279"
                     /note="rRNA (uridine-N3-)-methyltransferase BTM5-like;
                     Region: BMT5-like; pfam10354"
                     /db_xref="CDD:463056"
ORIGIN      
        1 atggcgtacc aattgtttat cattccatcc gccacaccag gttgttcaat ttatgtcgtc
       61 atagatggcg gagcgcctaa gatgagggtt ggattaactc ctgacgcgcc ccgtctttta
      121 tcttgccggg ctgttttcca aactcaggcg ttgtccgcgt cgagtcatgg tgagggccaa
      181 agcatactcc tcgttgggga ggcggacttt agttttagca tgtgcgtggc taaaagtctc
      241 gggcaaggtc aaaatatcac ggcaacctca ttgaacacca aagatgagtg ggagaaaatg
      301 ttctccaagg caaaaccaaa catacaagtg ttaaagaggc ttacggcgac tgtgattcct
      361 cgcgtggatg cgactaagat ggcacaacac ccaggtttta aggcacccaa cgtcaatgcc
      421 actaaaccca cactgctcaa gtttcagagg atcgttttta attttcctca tgcggggttc
      481 gttaagggtt caaacgaggc ggatgaagac atgattagcc gccaccaaga acttgtgtca
      541 gggtttctta agaatgcata cgagatgcta acggaagatg gcgaggtcca tgtgaggcat
      601 cactctgctg aaccatttaa gcgttggaaa gtcgtcgatt tggcaaaaaa agtcgggcta
      661 catttccgag agcagaagcc ttttaatctc gcagcttacc cgcattacac accaaaaaaa
      721 ggagccggga atgatccgga cgggcctctg acacttcaca aacccagcct ttttaggttt
      781 gaccaacttg accaagcgtg a
//
LOCUS       XM_071831506            1665 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BTB/POZ domain and ankyrin
            repeat-containing protein NBCL-like (LOC139841280), mRNA.
ACCESSION   XM_071831506
VERSION     XM_071831506.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1665
                     /gene="LOC139841280"
                     /note="BTB/POZ domain and ankyrin repeat-containing
                     protein NBCL-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 26 Proteins"
                     /db_xref="GeneID:139841280"
     CDS             1..1530
                     /gene="LOC139841280"
                     /codon_start=1
                     /product="BTB/POZ domain and ankyrin repeat-containing
                     protein NBCL-like"
                     /protein_id="XP_071687607.1"
                     /db_xref="GeneID:139841280"
                     /translation="MSLEDSLRSLSLDYLNLLINGQGFSDVTFSVEGRIVHAHRCILA
                     ARSLLFRKFFCSGGTDSPTGSGSGSDPLGSRVGNMGMGPASPRNLTSSQQVVIPVNSV
                     GYEVFLLMLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVNLALDTLSAARSFG
                     VEQLVLLTQKQLAFMVEKASIEDVMKVLLASRKQDMHQLWTTCSHLVAKSGLPPEVLA
                     KHLPIDVVAKIEELRLKSSLARRSLMPHHHPHHHQDLSVAADLEDQKIRRMRRALDSS
                     DVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPVGKTPLH
                     IASEMVSPDMVAVLLDHHADPNVRSIEGITSIDILRTLTSDFLFKGAVPGLTHIEPNK
                     LRLCLELVQSAAMVISREEGNAAAAVAASNAQMYPHPQMNDSSSSNSSGNIGNLNLDS
                     RLVYLNLGAAQIGCNKMDHVGDNSQQNTHQDHHHQHHHRHGSSQGGCDTSMYHHSHHE
                     Y"
     misc_feature    22..528
                     /gene="LOC139841280"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in plant
                     regulatory proteins, NPR1-4, and similar proteins; Region:
                     BTB_POZ_NPR_plant; cd18310"
                     /db_xref="CDD:349619"
     misc_feature    631..810
                     /gene="LOC139841280"
                     /note="Domain of unknown function (DUF3420); Region:
                     DUF3420; pfam11900"
                     /db_xref="CDD:314729"
     misc_feature    <814..>1110
                     /gene="LOC139841280"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    877..978
                     /gene="LOC139841280"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    982..1074
                     /gene="LOC139841280"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 atgtctctag aagattcact aagatcttta tcacttgatt accttaattt actaatcaat
       61 ggtcaaggtt tcagtgatgt tactttcagt gttgagggta gaattgttca tgctcaccgt
      121 tgtattctag cagctagaag cttgttgttc cgcaagtttt tctgttccgg tgggacagat
      181 tctccaaccg ggtctgggtc tggatccgac ccgttagggt caagagttgg caatatgggt
      241 atgggacccg cttcaccaag aaacctaacg agttcacaac aagttgtaat acctgtgaat
      301 tcggttgggt acgaggtgtt cttgttaatg ttgcagtttt tgtacagtgg acaggtttca
      361 attgtacctc aaaaacatga accaagacct aactgtggtg agagaggatg ttggcataca
      421 cattgcacat cagccgttaa tcttgctctt gatacacttt cagccgctag atcttttgga
      481 gttgaacagc ttgtattact cacccagaag caattagcat tcatggtaga gaaagcttca
      541 attgaggatg tcatgaaggt tcttttagct tcaagaaaac aagacatgca tcaactgtgg
      601 acaacttgtt ctcacttagt tgcaaaatct ggtcttccac cagaagtttt agctaaacat
      661 cttccaattg atgttgtagc aaaaatcgaa gaacttcgcc tcaaatcgtc cttagctcgc
      721 cgttctttaa tgccacatca ccatccacat catcaccaag atctttctgt agccgctgat
      781 ctcgaagatc aaaagatccg acgaatgaga cgagctctcg attcgtctga tgttgagcta
      841 gttaagctca tggtaatggg tgaaggacta aatcttgatg aagcattagc attacattat
      901 gcagttgaga attgtagccg tgaagtggtg aaagcgttac tcgaattagg tgcagccgat
      961 gtgaattatc cggctggacc ggttggaaag accccacttc acatagcatc cgaaatggtg
     1021 tcaccggata tggttgcggt tttacttgat catcatgcag atcctaatgt tagatcaatt
     1081 gaagggatca catcaattga tatacttaga accctaactt ctgatttcct atttaaaggg
     1141 gctgtcccgg ggctaactca tatcgaaccg aataaactta ggctttgtct tgaactagtt
     1201 caatcagcag caatggtgat ttcaagagaa gaaggtaatg cagcagcagc agtagcagct
     1261 tcaaatgcac aaatgtatcc acatccacaa atgaatgata gtagtagttc aaatagtagt
     1321 gggaatatag ggaacttgaa tcttgattca aggttggttt atttgaatct tggagcagca
     1381 caaattggat gtaacaaaat ggatcatgtt ggtgataata gccaacaaaa cactcatcaa
     1441 gatcatcatc atcaacatca tcatagacat ggttcttctc aaggtggttg tgacacatca
     1501 atgtaccatc attctcatca tgagtattag gtcaactata actttatata atcatttctc
     1561 tagagtcacc tttataatat tttcatctat gaagtgggac acttgaagca caaatatata
     1621 tcagccaatt catgggtacg tattaatatc atctttcatc tataa
//
LOCUS       XM_071831507             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA N(6)-methyladenine
            demethylase ALKBH1D-like (LOC139841281), mRNA.
ACCESSION   XM_071831507
VERSION     XM_071831507.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139841281"
                     /note="DNA N(6)-methyladenine demethylase ALKBH1D-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139841281"
     CDS             1..783
                     /gene="LOC139841281"
                     /codon_start=1
                     /product="DNA N(6)-methyladenine demethylase ALKBH1D-like"
                     /protein_id="XP_071687608.1"
                     /db_xref="GeneID:139841281"
                     /translation="MKTMFKEASSYNPCDDNYHLDLINSNEKTTAYLCNKAKRFSLIR
                     NDKVQGNHERLGEFLEKGMILLKNYVSVSDQVEIVNTCQKFGMGPGGFYRPVTRAGRR
                     KNFQMMCFGRNWDPITRYDWKHRSDGSEAPPIPNQLMSLAVNSLLKAHDSYMPLMDPD
                     ICIVKFYTTTIGKLCLRQDRDESRSSLEGGLPVVSVTIGDSARFVYSYTGDMAHAKEI
                     LLQSGDVLIFGGESRLIHHGIKKIIPESAPFSLLQQTNLYHY"
     misc_feature    184..744
                     /gene="LOC139841281"
                     /note="2OG-Fe(II) oxygenase superfamily; Region:
                     2OG-FeII_Oxy_2; pfam13532"
                     /db_xref="CDD:433285"
ORIGIN      
        1 atgaaaacaa tgttcaagga ggcttcgtca tataatcctt gcgatgataa ttatcatctt
       61 gatttgatca actcaaatga aaagacaaca gcatatctat gtaataaagc aaaacgattc
      121 agtttaatcc gaaatgataa agtacaggga aatcatgaaa gattggggga gtttctcgaa
      181 aagggaatga ttcttttgaa gaactacgtc agcgtgagtg atcaggttga aattgtgaat
      241 acgtgtcaaa aatttggtat gggtcccggg ggtttctacc gacctgtaac cagagctgga
      301 cgcagaaaga actttcaaat gatgtgtttc ggtcggaatt gggacccgat aacaagatat
      361 gattggaaac accgaagtga cggttctgaa gcaccaccca ttcctaatca actcatgtca
      421 ttggctgtaa actcacttct aaaagcacat gattcttaca tgcctttaat ggacccggac
      481 atttgtatcg tcaaatttta tactaccacc attggaaaac tttgtcttcg tcaggatcgg
      541 gatgaaagcc gaagtagtct ggaaggagga ttgccggtag tttccgtcac cattggtgac
      601 tctgcaagat tcgtgtatag ttataccggt gacatggccc atgcgaagga gattttgttg
      661 caatcgggag acgtattgat attcggggga gagtctagac ttatacatca tgggatcaag
      721 aaaataatcc cagaatcagc tcctttctca ttgcttcaac aaaccaacct ctatcattat
      781 taa
//
LOCUS       XM_071831508            1296 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841282), mRNA.
ACCESSION   XM_071831508
VERSION     XM_071831508.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1296
                     /gene="LOC139841282"
                     /note="uncharacterized LOC139841282; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841282"
     CDS             1..1296
                     /gene="LOC139841282"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687609.1"
                     /db_xref="GeneID:139841282"
                     /translation="MRIARELGVKKLQAYVDSQLVANQINGTFDANEKSMQSYLALVH
                     SLADTFIDFRISQIPRRQNKQADVLSKLAVLTFNHLEKKILVEQVFRKSTEPEITVAS
                     VVEEEATWMTDIIEFLCIPTLRRAQGSHYDYRLDSQGILRVAFWVEDSHREDQAIRLH
                     APVSRAPQHPMIPITSPWPFCKWAIDIVGPFPKGAGNAEYLVVAIDFFTRWVEAKPLR
                     SITSNPFRSWCQDLNIKQRFTSVAYPQANGQCEVTNRDIMHTIKARLGMKRNGWVDEL
                     PKVLWAHKTTHKNNTGETPFSLAYGSEAVIPAEITVPTERVLSYSEGKNDERLRTNLN
                     YAEERKEMAAIRVAANKQRIAKYYDKRVRARTYKVGDLVWRDNQASRAQNTGKLGPNW
                     EGPYKVIGISNTGTYKLAELKGNPIKRTWHATALKKCYM"
     misc_feature    <1..219
                     /gene="LOC139841282"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    <547..891
                     /gene="LOC139841282"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgcgtatag cccgagagct aggggtaaag aagctgcaag cctatgtaga ttcacagcta
       61 gtcgccaatc agataaatgg cacatttgac gccaatgaaa aatctatgca atcatacctg
      121 gctctggtcc actctctagc cgatacattc attgacttca ggatcagtca aatccctagg
      181 aggcagaaca agcaggcgga tgtactcagt aaactggcgg tcctcacctt caatcatctg
      241 gaaaagaaga tattagtaga acaagtcttc aggaaatcca cagagccaga gataacggtt
      301 gcgtccgttg tagaagaaga agcgacttgg atgacagata tcatagaatt cctgtgcatc
      361 cctacgctgc gtagggccca aggaagccac tatgattatc gactagattc acaagggatt
      421 ttgcgggttg cattctgggt ggaggacagt caccgagagg atcaagcgat caggttgcac
      481 gcgcccgtta gcagggcgcc acaacaccct atgataccta tcacgtcacc gtggccattt
      541 tgcaaatggg ctattgacat agtgggacct ttcccaaagg gcgcgggaaa cgctgaatac
      601 ctagtggttg ctatcgactt cttcaccaga tgggtggaag caaaaccact gcgcagcatc
      661 accagcaacc cctttcgcag ctggtgtcag gatttaaata tcaaacaacg cttcacctct
      721 gtcgcgtacc ctcaagctaa tggtcaatgt gaggttacga atagggatat tatgcacacc
      781 atcaaagcaa ggttgggaat gaagcgcaac ggatgggtgg atgagttacc caaagtccta
      841 tgggcacaca aaacaacgca caagaataac acaggagaga caccattcag cttggcatac
      901 ggttcagagg cagtaatccc ggcggaaata acagttccaa cagaaagagt cttgtcgtac
      961 agcgagggaa aaaacgacga aaggttgcgc actaatctga attatgcgga ggagcgcaag
     1021 gaaatggcag caatccgagt agctgctaac aaacagcgca ttgcaaaata ttacgacaag
     1081 cgtgtaaggg caagaactta caaggtggga gatcttgtgt ggcgcgacaa ccaagcaagc
     1141 agggcccaaa acactgggaa gttagggcca aactgggaag gaccttacaa ggtcattggg
     1201 atcagtaaca ctggaactta caaactggca gagcttaagg gaaatccaat caagcggacc
     1261 tggcatgcta ccgcgcttaa aaaatgctac atgtaa
//
LOCUS       XM_071831509             951 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841283), mRNA.
ACCESSION   XM_071831509
VERSION     XM_071831509.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..951
                     /gene="LOC139841283"
                     /note="uncharacterized LOC139841283; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841283"
     CDS             1..951
                     /gene="LOC139841283"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687610.1"
                     /db_xref="GeneID:139841283"
                     /translation="MRQRRWQELIKDYDHEIRYHPGKANLVADALSRKKFTDNVKFMR
                     IEIVSDLIDLLKIAQLEALKDEHLKSEILVKRIVDLIDDSRGLKTLKLQENLGTRVNL
                     STTYHPQTDGQSECTIQTLEDTLRACVLEYGGSWDSHLPLIEFAYNNSYHSSIGMPPY
                     EMLYGRRCRMPTCWLESREKQFVGPEIVQLTAEKVAIAREKLKAARDRQNMYADPRRR
                     PVIFTVGEQILPLQDLKVDMNKKLVEEPVRIVDKKITKLQHKQIPMDASVRLRGVSGT
                     FWVHPCSCRVHPYGCRCNRAVADAPVRLQCRRFLENLFWP"
     misc_feature    <4..102
                     /gene="LOC139841283"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgcgtcaga gacggtggca agagctaatc aaggattatg atcatgaaat tcgttatcat
       61 ccaggaaagg caaatttagt tgcagatgct ttgagtcgaa agaaattcac tgacaatgta
      121 aaattcatgc gaattgagat tgtgtcagat ttgattgatc tattaaagat agcacaatta
      181 gaagccttga aggatgaaca tttgaaatct gagatattag taaagcgaat agtggattta
      241 attgacgatt ctcgtggatt aaagactttg aagttacagg agaatttggg tactcgagtt
      301 aatctcagca caacgtatca tcctcaaaca gacggtcaaa gtgaatgtac tattcagacg
      361 ttagaggata cgttaagagc ttgtgtatta gagtatggag gatcgtggga ttctcatcta
      421 cccttgattg aattcgctta caacaactcg tatcactcta gtattggcat gccgccctat
      481 gaaatgctgt atggtcgtcg atgtagaatg ccgacttgtt ggttagaatc tagagagaaa
      541 cagtttgtgg gtccagagat tgtacagtta actgcagaga aagtggcaat tgcacgtgag
      601 aaattgaaag ccgcaagaga tagacaaaat atgtacgccg atccgcgcag acggccagtt
      661 attttcaccg taggtgagca gattctacca ctgcaagatt tgaaagttga tatgaataag
      721 aagttagtgg aagagcctgt aagaattgta gacaagaaga ttactaagtt acagcataag
      781 cagataccga tggatgcatc cgtacggtta cggggtgtat ccgggacatt ttgggtgcat
      841 ccgtgcagtt gcagggtgca tccatacggt tgcaggtgca accgtgcggt tgcagatgct
      901 cccgtacggt tgcagtgtcg cagatttttg gaaaacttgt tttggccgta a
//
LOCUS       XM_071831510             723 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841284), mRNA.
ACCESSION   XM_071831510
VERSION     XM_071831510.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..723
                     /gene="LOC139841284"
                     /note="uncharacterized LOC139841284; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841284"
     CDS             1..723
                     /gene="LOC139841284"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687611.1"
                     /db_xref="GeneID:139841284"
                     /translation="MAKWAIELGEHEISFSPRSAVKGKVLADYLAETVGDIEVSHESK
                     EIPPPPEQLWEMHTDGACGPEGAGEGVVIKSPEGEEYTFAMRFSFPVTNNEAEYEALL
                     SGMRVAKYLEVKELSVYVDSQLVANQFNEIFEAHNESMQKYLKLVQELAVDFDLFQIT
                     QVSRTLNKKADALNSSEARKIKMKAPMYLLDKGILYRKSFLGPHLWCLNPTQAESIIR
                     EVHEGMCSSDITGRQCTEMPQG"
     misc_feature    160..519
                     /gene="LOC139841284"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(175..186,274..282,289..291,361..363,481..483)
                     /gene="LOC139841284"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggccaaat gggctattga attgggagag catgaaataa gcttctcacc acgaagtgcg
       61 gtaaaaggga aagtcctagc agattatcta gctgaaacag tcggagatat cgaagtctcg
      121 catgaatcaa aagaaatacc acctccgccc gaacagctgt gggaaatgca cacagacggg
      181 gcttgtggcc cagaaggcgc aggggaagga gtagtcataa aaagtccaga aggagaggaa
      241 tataccttcg caatgcgatt cagcttccct gtcacaaata atgaagctga atatgaagca
      301 ttgttatctg ggatgcgggt agcaaaatat ctggaggtta aagaactgtc agtatatgtt
      361 gattcgcagt tagttgcaaa ccaatttaac gaaatattcg aggcacacaa tgaatcaatg
      421 caaaaatact taaagcttgt gcaagagcta gcagttgact tcgatttatt ccagataact
      481 caggtttcga ggacgctgaa taaaaaggcg gatgcgctaa attcaagtga agcaagaaag
      541 attaagatga aagcaccaat gtatctatta gacaaaggaa ttctatatag aaagtctttt
      601 ctgggacctc atttgtggtg ccttaatcca actcaagcag agtcaatcat acgggaagta
      661 cacgagggaa tgtgcagctc ggatattact gggcgtcaat gtacagagat gccgcagggg
      721 taa
//
LOCUS       XM_071831511             702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841285), mRNA.
ACCESSION   XM_071831511
VERSION     XM_071831511.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139841285"
                     /note="uncharacterized LOC139841285; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841285"
     CDS             1..702
                     /gene="LOC139841285"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687612.1"
                     /db_xref="GeneID:139841285"
                     /translation="MSSSDEESLVNAMKNIFAYRNNVVIPREVEEQNEAQSSRRKGRY
                     IYRDRVEAHNRLMKDYFVQDPKYPPEYFKRRYRISQSLLEKIIEGILSYSTRPDAPEY
                     FTYFQQRPDARGVLGVSTILKVTSAIRQLTYGDSPDLFDEYLQISERTSRESLQNFTR
                     CIIDLYANVYMREPTEDDIRRFYHKHEELHGFPGMLGSIDCMYWAWGKCPNAWKGQFT
                     RGNHGYPTIMLEAVA"
     misc_feature    508..>699
                     /gene="LOC139841285"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagtagtt ccgacgaaga aagtttggtg aacgcgatga aaaatatttt tgcttatcga
       61 aataacgtgg taattcctag agaggtcgag gaacaaaatg aggctcaaag ctcaagacga
      121 aaaggtcgct acatttatcg tgatcgtgta gaagcgcaca atcgtttgat gaaagattac
      181 tttgttcaag atccgaagta tccccctgaa tatttcaaac ggcgttatcg aatatcacaa
      241 agtcttcttg aaaaaataat tgaaggtata ctttcttact ctactcgtcc cgatgcacca
      301 gagtatttta cttattttca acaacgtccc gatgcacgtg gtgttctcgg agtatctact
      361 attttaaaag tcacgtctgc cattcgtcaa ttaacatacg gtgattcacc ggatctattt
      421 gacgaatatt tacaaatttc agagagaaca tcacgtgagt ctttgcaaaa ttttacaaga
      481 tgtattatag atttgtatgc taatgtatac atgagagaac caaccgagga cgatatacgt
      541 cggttctatc ataaacatga agaacttcac ggctttcctg gaatgcttgg aagcattgat
      601 tgtatgtatt gggcttgggg aaaatgtcca aatgcatgga aagggcaatt cacacgaggc
      661 aatcacggtt acccgacaat catgttggaa gccgttgcat ag
//
LOCUS       XM_071831512             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841286), mRNA.
ACCESSION   XM_071831512
VERSION     XM_071831512.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139841286"
                     /note="uncharacterized LOC139841286; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841286"
     CDS             1..570
                     /gene="LOC139841286"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687613.1"
                     /db_xref="GeneID:139841286"
                     /translation="MAGSNNDLNVLNASPLFDSLLTDTAPQVPYEIGDIDFDRAYYLA
                     DGIYPSCASFVKGFSSVVDAKRKYFTKKQSAARKDVERTFGILQSRWGILRQPARGYS
                     VNTIERIMYGCLILHNMIIEDNGFNIAENKSYYLPVNNLQGSTWYKRCDVYAEKTKEL
                     RDKDEHEYLRHTLVSHLCHNRDDEIVNEL"
     misc_feature    <4..375
                     /gene="LOC139841286"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcaggtt cgaacaatga cttgaatgtc cttaatgcat ctccattgtt tgatagttta
       61 ctaactgaca cggctcctca agttccatac gaaattgggg acattgattt tgatcgagcc
      121 tactatcttg ccgatgggat ttacccttcg tgcgcttctt tcgttaaggg attctcaagt
      181 gttgttgatg caaaaaggaa atactttaca aagaaacaat ctgcagctcg taaagacgtt
      241 gagaggacat ttggaatttt gcaaagtcgt tggggtattt taagacaacc tgctagggga
      301 tatagcgtaa acacaatcga aagaattatg tatggttgcc tcatattgca caacatgata
      361 attgaagaca atggttttaa catcgctgaa aataaatctt actacttgcc tgtcaacaac
      421 ctacaaggat caacttggta caaaaggtgt gatgtatatg ccgagaagac aaaagaactg
      481 cgtgacaaag acgagcatga gtatcttcga catactcttg tttcacatct atgtcataat
      541 cgcgatgacg aaatagttaa cgaattgtaa
//
LOCUS       XM_071831513            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841287), mRNA.
ACCESSION   XM_071831513
VERSION     XM_071831513.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139841287"
                     /note="uncharacterized LOC139841287; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841287"
     CDS             1..1035
                     /gene="LOC139841287"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687614.1"
                     /db_xref="GeneID:139841287"
                     /translation="MRCIRPAEAEMIIEEVYSGSCALHSGYKTIASKVMRLDYFWPTL
                     YRDVAKIVKRCKSCQRHAPQNRKSRHDMIPVNLPWPFHKWAINIVGPFPAGAGNVRFG
                     IPHEIVSDIGAQISKDPFKSWCEELNSVQKFTSIVHPQANGLCEVTNRDIVSEIKKHL
                     NEKRTGWVDELSNVLWAHRTTFKKSTGETPFSLVYGSEAIIPTEIFVPTHRIANFDEN
                     ANDDALCENLNFVQERRLMAAIKEANNKQQIVKYYNKKVRALAFDVGEWVLCNNEANR
                     AENVGKLGPNWAGPYQIIAINTIGSYKLGDIAGRIIPNAWHATLLKRYYAYIVSCAMI
                     YTQRNSELLL"
     misc_feature    10..192
                     /gene="LOC139841287"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcgttgta ttaggcccgc agaggcagag atgatcattg aagaggttta tagcggttct
       61 tgtgcactgc attctggata taagactatt gcgtctaaag ttatgcggtt ggactacttt
      121 tggccaaccc tatatcgcga tgtggcaaaa atagtaaaaa ggtgcaaaag ttgtcaaagg
      181 catgcgccac agaacagaaa atcaaggcat gatatgattc cagtgaactt gccttggcca
      241 ttccataaat gggcaattaa tattgtaggg ccatttcctg cgggagcagg aaacgtgaga
      301 tttggcatac ctcatgaaat tgttagtgat attggtgcgc agatatcgaa agatccattt
      361 aaaagttggt gcgaagaatt aaacagcgtg caaaaattta catctattgt gcacccgcaa
      421 gccaatggat tgtgcgaagt aactaatcgc gatattgtta gcgaaattaa aaagcactta
      481 aatgaaaagc ggactggatg ggttgatgaa ctatccaatg tgttgtgggc acatcgcaca
      541 acatttaaga aaagtactgg cgaaacaccc tttagtcttg tgtatggctc ggaggcaata
      601 attcccacag aaatttttgt gccaacacat aggattgcca attttgatga aaatgcgaat
      661 gatgacgcat tatgtgaaaa tttaaatttt gtgcaggaac gcagattaat ggctgcaata
      721 aaagaagcga ataataagca acagattgtg aagtattata acaaaaaggt gcgtgcttta
      781 gcctttgatg tcggcgagtg ggtattatgc aacaatgaag caaaccgcgc agaaaatgtt
      841 ggtaaattgg gacccaattg ggcaggaccc taccaaataa tagcaataaa cacaattggt
      901 tcttacaagc tcggagacat cgccggaaga atcattccta atgcatggca cgctacgctg
      961 ttgaaaagat attacgcata cattgttagt tgcgcaatga tttacacgca gagaaattca
     1021 gaactgttgt tataa
//
LOCUS       XM_071831514            1932 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sodium-dependent phosphate
            transport protein 1, chloroplastic (LOC139841288), mRNA.
ACCESSION   XM_071831514
VERSION     XM_071831514.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1932
                     /gene="LOC139841288"
                     /note="sodium-dependent phosphate transport protein 1,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 20 Proteins"
                     /db_xref="GeneID:139841288"
     CDS             77..1663
                     /gene="LOC139841288"
                     /codon_start=1
                     /product="sodium-dependent phosphate transport protein 1,
                     chloroplastic"
                     /protein_id="XP_071687615.1"
                     /db_xref="GeneID:139841288"
                     /translation="MAGRSLPVSPHRPPDTPIHRKILSSDSNSKSNSNSNLKHFRLRF
                     DIVFNSSITRKNHKVWRIKSELKSEPYEISKSTTPGSFKFKDNKLGVSAVSKDETGNE
                     AVDINAVPWWEEFPKRWTIVILCFSAFLLCNMDRVNMSIAILPMSSEFHWNSTTVGLI
                     QSSFFWGYLLTQIAGGIWADTVGGKRVLAFGVIWWSVATVLTPIAAKLGLPFLLIVRA
                     FMGIGEGVAMPAMNNLLSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHSYGWP
                     SVFFSFGSLGTVWTALWLSKAYSSPSEDPELRPEEKKLIFRNRVSEEPVKTIPWGSIL
                     SKAPVWALITCHFCHNWGTFILLTWMPTYYNQVLGFNLTESGLFCVLPWLTMAFSANL
                     GGWIADTLVSKGWSVTTVRKVMQSVGFLGPAFFLSQLSHVDSPAMAVFCMACSQGSDA
                     FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGYILQHGSWDEVFDVAIG
                     LYLVGTVIWNLFSTGEKIID"
     misc_feature    440..1639
                     /gene="LOC139841288"
                     /note="Solute carrier family 17 member 9 and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; Region: MFS_SLC17A9_like; cd17380"
                     /db_xref="CDD:340938"
     misc_feature    order(470..475,482..487,494..496,590..592,746..751,
                     755..763,770..772,830..832,839..844,851..853,1112..1114,
                     1121..1126,1133..1141,1148..1150,1232..1234,1244..1246,
                     1415..1420,1430..1432,1442..1444,1490..1492,1499..1504,
                     1511..1516,1523..1525)
                     /gene="LOC139841288"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340938"
ORIGIN      
        1 aacaaatata atttatttat tttaattata tctatcatca caaaatcaat acaaacaagt
       61 ctcaactcaa tcaccaatgg ccggaagatc acttccagtc tctcctcacc ggccaccgga
      121 cacgccaatt caccggaaaa ttctcagttc cgattccaat tcgaagtcaa actcaaattc
      181 aaacttgaaa cactttagat taaggtttga tattgttttc aatagttcaa ttactcgtaa
      241 aaatcataag gtgtggagga ttaaatccga attaaaatca gaaccttacg agatttcaaa
      301 atcaactaca cctgggtcgt tcaaatttaa ggataataag ttaggagtta gtgctgtatc
      361 aaaagatgaa actggaaatg aagctgtgga tattaatgcg gttccatggt gggaggagtt
      421 tccgaaacga tggactattg ttatcttatg tttttcggct tttcttcttt gcaatatgga
      481 tagagtgaat atgagcattg ctatattacc aatgtcatca gagttccatt ggaattcaac
      541 aacagtcggt ttgatacaat cgtcgttttt ttggggatac cttctcactc agattgcagg
      601 aggaatttgg gcagacactg taggtgggaa gcgtgtttta gctttcggtg ttatatggtg
      661 gtctgtagct actgtactta ctccaattgc tgcaaagtta ggattaccgt tcctactcat
      721 agttcgtgcc tttatgggca taggcgaggg tgtggccatg cctgctatga ataatctctt
      781 gtcaaaatgg gttccagttt cagagagaag tagatcattg gctctggttt acagtggaat
      841 gtaccttggg tctgttaccg ggcttgcgtt ttcaccgttc ttaatacatt catatggatg
      901 gccttcggtc tttttctcgt ttggttcctt agggacagtg tggactgcct tatggttgag
      961 taaggcatac agttcacctt ctgaagatcc tgaacttcgt cctgaagaaa agaagctgat
     1021 attccgcaat agagtttctg aagaacccgt taaaactatt ccttggggat caatattgtc
     1081 aaaggcaccc gtatgggcgt tgataacgtg tcatttttgt cacaactggg gaacatttat
     1141 actcctcaca tggatgccta cctattataa ccaggttctg ggctttaatt taacagaatc
     1201 tgggcttttt tgtgtattgc cttggcttac gatggctttc tcggccaatc ttggaggctg
     1261 gatagctgac acacttgtaa gcaaaggttg gtctgtgacg acagttcgaa aggtaatgca
     1321 atcagttgga tttcttggac ctgcattttt cttatcgcaa ttaagccatg ttgactcgcc
     1381 tgctatggct gttttctgca tggcgtgtag tcagggttct gatgcatttt cacagtcggg
     1441 attatattca aatcatcaag atattgcccc tcgatattcc ggtgtgctgc ttggtttgtc
     1501 gaatactgcg ggagttttgg ctggcgtttt gggtactgca gctaccggtt acattttgca
     1561 acatggttct tgggacgagg tctttgatgt ggcaatcggg ctatatttgg ttggaactgt
     1621 gatatggaat cttttttcaa ctggcgagaa aataatcgac taaatcaaat caagtctgat
     1681 ttgtcaccta tgatgaggcg atttcaaatc gacaaatggg tgctggcaat tatcgaggct
     1741 agatagaaac attcttgtat attacaatca cctttatata tccacaacca tttcacaggt
     1801 ccaaagatat aaatatagga agattagaca cacatgttga tagactttgt gtactctata
     1861 atattaatag catgcagcat tatgaaatat tgccttatgt atgcaactgt ggcatatgta
     1921 atgttttgtt ct
//
LOCUS       XM_071831515             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841289), mRNA.
ACCESSION   XM_071831515
VERSION     XM_071831515.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139841289"
                     /note="uncharacterized LOC139841289; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841289"
     CDS             1..588
                     /gene="LOC139841289"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687616.1"
                     /db_xref="GeneID:139841289"
                     /translation="MDFKWIEEAEVAFQEMKKLLNELSTMTAPIAGETLILYLAASKE
                     AISSVLIANRGQVQMPVYFVSKALTGSELNYLAIEKLVLYKPENSGHMAKWAIEIGEH
                     EISFSLRSAVKGKVLADYLAETARDIEMSHESKEIPPPPEQLWEMHTDGACGPEGAGT
                     GIVLKSPEGEEYTFALRFSFPVTNNEAEYEALLSV"
     misc_feature    13..>249
                     /gene="LOC139841289"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    433..>579
                     /gene="LOC139841289"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggatttca agtggataga ggaagcagaa gttgcgtttc aagaaatgaa aaagctgtta
       61 aatgaattgt cgacgatgac tgcgccgatt gcaggagaga cgttaatact ttacttagcg
      121 gcatcaaaag aagcgataag ttcagtattg atagcaaaca gggggcaggt acaaatgccc
      181 gtatattttg ttagtaaagc tttaacagga agcgaactaa attaccttgc gatcgaaaaa
      241 ctggtgctat acaaaccaga aaattctggt cacatggcca aatgggctat tgaaataggt
      301 gagcacgaga taagcttctc actaagaagt gcggtaaaag ggaaagtcct agcagattat
      361 ctggccgaaa cagccagaga tattgaaatg tcgcatgaat caaaagaaat accacctccg
      421 cccgaacagc tatgggaaat gcacacagat ggggcttgtg gtccagaagg cgcagggacg
      481 ggaatagtcc tgaaaagtcc ggaaggagag gaatatacct ttgcgctacg ttttagcttc
      541 cctgtaacaa ataatgaagc tgagtatgaa gcattattat ctgtgtaa
//
LOCUS       XM_071831516             894 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841290), mRNA.
ACCESSION   XM_071831516
VERSION     XM_071831516.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..894
                     /gene="LOC139841290"
                     /note="uncharacterized LOC139841290; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841290"
     CDS             1..894
                     /gene="LOC139841290"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687617.1"
                     /db_xref="GeneID:139841290"
                     /translation="MRVAKYLEVKELSVYVDSQLVANQFNGIFEAHDESMQKYLKLVH
                     ELAVDFDIFQIMQVSRTLNKKADALSKLAALTSSHFKKENWVEEVNVKSIDTDGISAA
                     VEEDEPSWMTPIVEFLNTGTLPIDSTEVRKIKMKAPMYLLDKDILYRKSFLGPHLRCL
                     NPTQVESIIREVHEGMCALHSGHKTVASKIMRLGYYWPSMYKDVAEVEAKPLKTISGK
                     QIQNFVWENIVCRFGIPNEIVSENGTQFESNPFSDWCQELNIKQTFTSVVHPQANGQC
                     EVTNRDIVLAIKARLGLCQRG"
     misc_feature    <1..222
                     /gene="LOC139841290"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    478..>621
                     /gene="LOC139841290"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    <670..849
                     /gene="LOC139841290"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgcgagtag cgaaatactt ggaggtaaaa gagttatcag tatatgttga ttcacagtta
       61 gttgcaaatc aattcaatgg gatatttgaa gcacatgatg agtcaatgca aaagtatctg
      121 aaacttgtgc atgaacttgc ggtagacttc gacatattcc agataatgca ggtttcaaga
      181 acgttgaata aaaaggcgga tgcgctcagt aagctggctg ccttaacatc cagccatttc
      241 aaaaaagaaa attgggtcga ggaagtgaat gttaaatcca ttgatacaga cggcatatct
      301 gccgcagtcg aagaagatga accaagttgg atgacaccga tagtggaatt tttgaacact
      361 ggaacattgc caatagattc aacagaggta aggaaaatta aaatgaaagc accaatgtat
      421 ttgctagaca aagacatcct atatagaaaa tcttttttgg gacctcattt gcggtgtctt
      481 aatccaactc aagtagaatc aattatacga gaagtgcatg aagggatgtg cgctttacat
      541 tcagggcaca aaacagttgc ttccaaaata atgcggctgg ggtactattg gccgtcaatg
      601 tataaagatg tcgcggaggt agaagccaaa ccgctcaaaa caatttcagg caaacaaatc
      661 caaaattttg tatgggaaaa catcgtctgc cggtttggaa taccaaatga aatagtaagt
      721 gaaaatggta cacaatttga aagtaaccca ttcagtgatt ggtgtcaaga gctaaatata
      781 aagcaaacgt tcacatcagt tgtacacccc caggcaaacg gacaatgtga ggtaacaaat
      841 cgagatatcg tgttagctat caaggcaaga cttgggttgt gccaaagggg ttag
//
LOCUS       XM_071831517            1482 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841291), mRNA.
ACCESSION   XM_071831517
VERSION     XM_071831517.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1482
                     /gene="LOC139841291"
                     /note="uncharacterized LOC139841291; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 26
                     Proteins"
                     /db_xref="GeneID:139841291"
     CDS             1..1482
                     /gene="LOC139841291"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687618.1"
                     /db_xref="GeneID:139841291"
                     /translation="MAIVLRFVDANGVLTERFLDLVHVQDTSAITLKRSLWERLSHYE
                     FDTSKIRGQSYDGASNMRGEWKGLKALVLKDCPYAYYVHCFAHRLQLALVAASREVIP
                     IHQFFEKLTFIINMICASSKCHDELQKAKALETERLLELGEIETGKGANQVGTLRRAG
                     DTRWGFHFSSVCSLISMFNSTRVVHRGIIDDGSCSSQRGDADTAYGYTKSFEFVLILH
                     LMKKILGKTEFLSQALQKKSQDIINAMTLVTATKEYLNDLRNNGWDSLLERVKIFSEK
                     HEVDIPDLSAPYKSGRYHPRRQDNHVTFEHYYRVDVFISTLDTQLLELNNRFDDQAME
                     LLTLSSTLVPRKDSKLLNVDHLCSLVEKYYPVDFTEQERSRLKSELELFNIELGKNPK
                     LIGASTLTEVCRGLVETGKHENYNMLDRLIRLILTLPVLTATTERAFSGMKICKNRLR
                     NKMYDEFLADNLVVYIEREIAEKFNSESVIDEFKMLKGRRAEL"
     misc_feature    <1..201
                     /gene="LOC139841291"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    <1231..1410
                     /gene="LOC139841291"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggccatcg ttttaagatt cgtagatgca aatggggtgt taactgaaag gttcttggat
       61 ttggtgcacg ttcaagatac ttcagcaata actctaaaac gaagtttatg ggaacgactt
      121 tcacattatg agttcgatac tagtaaaatt cgaggtcaga gttatgatgg agctagtaac
      181 atgagagggg aatggaaagg attaaaagct cttgttctta aagattgtcc ttatgcatac
      241 tatgtccact gttttgctca cagattacaa cttgctttag ttgcagcctc gagagaagtt
      301 atcccaattc accagttctt cgaaaaacta acttttatca taaatatgat atgtgcttct
      361 agtaaatgtc atgatgaatt gcaaaaggca aaggctcttg aaactgaacg tttattggaa
      421 cttggtgaaa ttgaaacggg taaaggagct aaccaggttg ggaccttaag aagagcaggt
      481 gatactcgtt ggggtttcca tttttcttca gtttgcagtt tgatttcaat gtttaattct
      541 actcgtgttg ttcatagagg aataattgat gatggatctt gttcttctca acgtggagat
      601 gctgatacag cttatggtta cacaaaatca tttgagttcg tgttgatttt acacttaatg
      661 aagaagatat tgggaaagac tgaatttctt tcccaagctt tgcaaaagaa atctcaagat
      721 attatcaatg ccatgacgct agttacagca acaaaggagt atcttaatga tttaagaaat
      781 aacggatggg attctttact tgaacgagtg aaaatatttt cggagaaaca cgaagtagat
      841 attcctgatt tgagcgctcc atacaagtct ggtcgatatc accctcgtcg acaagataat
      901 catgttactt ttgaacatta ttatcgagta gatgtcttca ttagcacact tgacacacag
      961 ttgttagagc taaacaatag atttgacgat caagctatgg agttattaac tcttagctcc
     1021 actttagttc caagaaaaga ctcgaaattg ttaaatgttg atcatctttg ttctctagtt
     1081 gagaaatact atcctgtaga ttttacagag caagagagaa gccgattgaa atctgagttg
     1141 gagttgttta atattgagtt gggaaagaac ccgaagctaa ttggtgcatc aactcttact
     1201 gaagtatgta gaggtcttgt ggaaactggg aaacacgaga actataatat gctggatagg
     1261 ttaattcgac tgatcttaac gcttcccgtt ttaactgcta caaccgagag agcattttca
     1321 gggatgaaaa tatgcaagaa tcggcttcgc aacaagatgt acgatgaatt tctagcggat
     1381 aatttggtgg tttatattga aagagaaatt gctgaaaagt ttaattctga atctgtaatc
     1441 gatgaattta aaatgctcaa aggtcgtcga gccgaattgt aa
//
LOCUS       XM_071831518             948 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841292), mRNA.
ACCESSION   XM_071831518
VERSION     XM_071831518.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..948
                     /gene="LOC139841292"
                     /note="uncharacterized LOC139841292; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841292"
     CDS             1..948
                     /gene="LOC139841292"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687619.1"
                     /db_xref="GeneID:139841292"
                     /translation="MDKQKSITSFFKRTIDDTTKVDIQNSKRFKPSTSEHEQQQNEQV
                     PPVFESSRPNVGDVDSNSFERDPGMREQIWSYPVDKREQVRRFYLNQGPYQIRLDEYP
                     TKGTSTKPRRFRYAWFGKFSNWLEYSPTKDAAYCFLCYLFSDKPAVRKGDDAFIVKGF
                     DKWKKVNDGNRCAFLKHANSLQHKSALLSSENLLNQAGHIENVFEKQRLESKLNNRLR
                     LKASIDIVRWLTFQACAFRGHDESTNSSNRGNFLELLTLLASYNDDVAKVVLENAPYN
                     SKFTSGLIQKELLNIIANKVRKHIRCEVGDSYFCVMVDE"
     misc_feature    457..>945
                     /gene="LOC139841292"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atggataaac aaaaatctat tacctcattt ttcaagagaa ctatagatga tacaaccaaa
       61 gtcgatattc aaaatagtaa acgattcaaa ccttcaacaa gtgagcatga acaacaacaa
      121 aatgaacaag taccacctgt ttttgaatct tcaaggccga atgtaggcga tgtggactct
      181 aattcttttg aaagagatcc cggtatgcgt gaacaaatat ggagttaccc ggttgataaa
      241 cgggaacaag taagacggtt ttatctgaat caaggacctt atcagattcg tttggacgag
      301 tatcctacta aaggtacatc tactaagcct cgtagatttc gatacgcttg gtttggtaaa
      361 ttttctaatt ggttagaata ttctcctaca aaggatgccg cgtattgctt tctttgttac
      421 ttgtttagtg acaaacccgc tgtccgaaaa ggtgatgatg cttttattgt taaaggattt
      481 gataaatgga aaaaagttaa tgatggaaat agatgtgcat tccttaagca tgctaatagt
      541 ttacaacata aaagcgcctt attatctagc gaaaatttgt tgaatcaagc tggacatatt
      601 gaaaatgtct ttgagaagca acgtttagag tcgaaattaa ataaccgtct acgactgaaa
      661 gcttcaattg acattgttcg ttggttgaca tttcaagctt gtgcttttcg tgggcatgat
      721 gaatcgacta attcaagtaa tcgcggtaat tttcttgaac ttttgacgct tttagcttct
      781 tacaatgatg atgttgccaa ggttgtgttg gagaatgctc cttataattc aaagttcact
      841 tcgggattga ttcaaaaaga acttttaaat ataattgcca acaaagttcg aaaacatatt
      901 cgttgtgaag ttggcgattc ttacttttgt gtcatggttg atgagtag
//
LOCUS       XM_071831519             669 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841295), mRNA.
ACCESSION   XM_071831519
VERSION     XM_071831519.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..669
                     /gene="LOC139841295"
                     /note="uncharacterized LOC139841295; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139841295"
     CDS             1..669
                     /gene="LOC139841295"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687620.1"
                     /db_xref="GeneID:139841295"
                     /translation="MHWAWAKCPVAWRGQYMRGDHSHPTIMLEVVASYDNWIWHAYFG
                     VAGSNNDINVLNSSNLFNSMLNEEMPDVPYHINGVEYRRGYYLADDIYPTWAAFVKGF
                     SSVVDKKHSYFTKKHAEARKDVERTFGILQGRQPARSYEVNQMRRLMYTCIIIHNIII
                     EDNGYNLAENDWVVEPVQHIQRTWIERCDARARRTRELRDREVYEGLRSELVEHLWDL
                     RDDL"
     misc_feature    1..492
                     /gene="LOC139841295"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcactggg cttgggcaaa atgtccagtt gcatggagag gccaatatat gcgaggtgat
       61 cacagtcatc caactattat gcttgaagtc gtcgcctcgt atgataattg gatttggcat
      121 gcgtattttg gtgttgcagg atcaaacaac gatataaatg tgttaaacag tagtaatttg
      181 ttcaactcaa tgctcaatga ggaaatgcca gatgtgcctt atcatataaa cggtgttgag
      241 tacagaagag gatactattt agctgacgat atttatccaa catgggccgc atttgttaag
      301 ggattttcaa gtgtagttga caaaaaacat tcttacttta caaagaaaca cgcggaagct
      361 cgcaaagatg tagaaaggac ttttgggatt ctacaaggtc gtcaacccgc acgatcttac
      421 gaagtgaatc aaatgaggcg acttatgtat acatgcatca taatacacaa catcattatt
      481 gaagacaatg gatacaacct tgctgagaat gattgggttg ttgagccggt tcaacatata
      541 caacgtactt ggatcgagag atgcgacgct cgtgcaagaa gaacaaggga gttacgtgat
      601 agagaagtgt atgaaggctt acgatcagaa ttggttgaac atttgtggga tcttcgagac
      661 gacttatga
//
LOCUS       XM_071831520             372 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841296), mRNA.
ACCESSION   XM_071831520
VERSION     XM_071831520.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..372
                     /gene="LOC139841296"
                     /note="uncharacterized LOC139841296; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841296"
     CDS             1..372
                     /gene="LOC139841296"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687621.1"
                     /db_xref="GeneID:139841296"
                     /translation="MKDCPSVGKTTEPAKGRAFNINSSEARDDPKLVTGTFLLDNHRA
                     YVLFDSGADRSFVSKDFCHNIKKPVSSLENLYSIEIGNVNIMKADQIYRGYTFNLAGK
                     SFSIDLIPIKLGSFDLVVGMD"
     misc_feature    40..369
                     /gene="LOC139841296"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(145..147,151..153,157..159,232..240,355..357)
                     /gene="LOC139841296"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    145..153
                     /gene="LOC139841296"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    145..147
                     /gene="LOC139841296"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(232..243,253..264)
                     /gene="LOC139841296"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaaggatt gcccgagtgt ggggaagact actgagcctg cgaaaggacg agcattcaac
       61 atcaattcaa gtgaagcacg cgatgatccg aagctagtca cgggtacgtt cttactcgac
      121 aaccatcgtg cttatgtact ttttgattct ggtgctgata ggagttttgt gtctaaggat
      181 ttttgccata atattaagaa acctgtatcg tcattagaaa acttgtactc tatagaaata
      241 gggaacgtta atataatgaa agctgatcaa atttatcgtg gttatacttt taacttggct
      301 gggaaatctt ttagtattga tctgataccg attaagttgg gaagttttga ccttgtggtc
      361 ggaatggact ga
//
LOCUS       XM_071831521             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841297), mRNA.
ACCESSION   XM_071831521
VERSION     XM_071831521.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139841297"
                     /note="uncharacterized LOC139841297; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841297"
     CDS             1..804
                     /gene="LOC139841297"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687622.1"
                     /db_xref="GeneID:139841297"
                     /translation="MIALSLNIRGIRKDVKKDSVGLSGGMLLIWDSTIFKVDEAIEGE
                     FFIAVKGKVEGFDSEVAIVNVYGPHSMAKKIRFWDSLETLISDRKMPWLVCSDFNEVR
                     NQNDRFNSVFNSNWAQRFNYFIDKTCLIDISLGGKRFTRVCDNGIKFSKIDRFLISEE
                     FNYCWPMLTATVLERKHSDHAPIILRNGHTDFGPKPIRVFNEWLKIDGVDDIIKKSWN
                     DNGSGIRPDCIMRNKLKKVKFELKKLSSVFENLEEEIQKHSKATNDWKN"
     misc_feature    <136..558
                     /gene="LOC139841297"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(196..198,295..297,538..540)
                     /gene="LOC139841297"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgatagcac tttctttaaa tataagagga attaggaaag acgttaagaa ggattctgtt
       61 gggctctcag gcggtatgtt actgatatgg gattcaacaa ttttcaaggt agatgaagct
      121 atcgaaggcg aattttttat tgctgtcaaa ggcaaagtgg aaggatttga ttcggaagtg
      181 gctatagtaa acgtgtatgg tccccattct atggcgaaaa aaattcgttt ttgggatagt
      241 ctggaaacgc taatcagtga caggaagatg ccatggttag tatgcagcga ctttaatgag
      301 gttagaaatc aaaacgatcg gttcaattca gtttttaaca gtaattgggc acaaagattc
      361 aattatttta ttgacaaaac gtgcttaatc gacatttcgc ttgggggaaa aagatttact
      421 cgggtgtgcg ataatggtat aaagtttagt aagatcgaca ggtttttgat atcggaggag
      481 tttaattact gctggcctat gttaactgct accgttctcg aaagaaagca ttcggatcac
      541 gctccgataa ttctcagaaa cggacatacc gattttggtc caaaaccaat tagggttttc
      601 aacgaatggt taaaaatcga tggcgttgat gatataatta aaaagtcttg gaatgacaat
      661 gggtcgggaa taagaccaga ttgtataatg cggaataaat tgaagaaagt caagtttgaa
      721 ctcaagaaat taagttctgt atttgagaat ctagaggagg aaatacagaa gcactcaaag
      781 gcaacgaatg attggaaaaa ttag
//
LOCUS       XM_071831523            2013 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841298), mRNA.
ACCESSION   XM_071831523
VERSION     XM_071831523.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2013
                     /gene="LOC139841298"
                     /note="uncharacterized LOC139841298; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841298"
     CDS             1..2013
                     /gene="LOC139841298"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687624.1"
                     /db_xref="GeneID:139841298"
                     /translation="MRKEVQSLNGKLVALYRFLSKATERSLPFFKVLKDNVGRNFDWT
                     PEADHAFQEMKALIRTLPKLTAPVPGETLTIYLAAGTEAVSSVLVAERGGIQMPVYFV
                     SKVLQHDEVNYKPIKKLIFALVQTARRLRRYFQAHPMLVLTDSPIKQVLSKPEVVGRL
                     AKWAIELGEHEIHYAPRTAVKGQIMEVFMVEFKCAAPLAPVVEEVSNIITWELFTDEA
                     SSSEGAGAGLILIGPDGEEHTYALRFKFPASNNEAEYEALLSGLRMAEKMGIKCLKVS
                     VDSQLVANQMNGMFEARDPAMQNYLALAEEMANKFERFSITQVPRSLNKKADALSKLA
                     SSVFSHFTKDVLVEVLTQKSTDVVQEAAPVEEVETWMSPIVTYLKNRMLPFDGATPRK
                     IRMKAPVYMLRDGVMFKKSFTAPLLRCVGPSEAETIVREVHEGTCGMHAGFRTVVGKI
                     MRLGYFWPSMYRDTKEIIKAYASCQRYAPQIHMPAHELIPVMFAWPFYKWEIDLVGPF
                     PDGKHLVVAIDFFTKWVEAKPLKSITGIQIVNFVWEKIVCCFGIPHENVNGQVEVTNR
                     DIVAGIRARLDTDRKGWADELPQVLWAFRTTPKGSNRETPFSLIYGTEAVIPAEIVVP
                     TQRVVQFNDESNVISLKENLDLLEEMRNAAAIREASNKQKIAKYYN"
     misc_feature    205..507
                     /gene="LOC139841298"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    631..1008
                     /gene="LOC139841298"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(646..657,745..753,760..762,832..834,952..954,
                     994..996)
                     /gene="LOC139841298"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    1258..1440
                     /gene="LOC139841298"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgagaaagg aggtgcaaag tctgaacgga aagttggtag cgttgtacag attcctgtca
       61 aaggcgacag aacggtcact cccattcttc aaagtgttga aagacaacgt gggacggaac
      121 ttcgattgga ctcctgaagc ggatcatgct ttccaggaaa tgaaggcttt gataaggaca
      181 ttgccgaagt tgacggcacc agtaccgggc gaaactttga caatttactt agcggcgggc
      241 actgaggctg ttagctcggt gcttgtcgcg gagcgtggcg gcatacagat gccagtttat
      301 tttgtgagca aagtgctaca acatgacgaa gtcaactaca aaccgattaa gaagcttatt
      361 ttcgcgttgg tccaaaccgc aagacggttg agacggtact ttcaagcgca cccaatgctg
      421 gtgctaactg attcgcctat taaacaggta ttgagcaaac cagaggttgt aggcaggcta
      481 gccaagtggg caatcgaact gggtgaacat gaaatccatt acgccccccg taccgctgtc
      541 aaaggccaga ttatggaagt ttttatggtt gaattcaaat gcgccgcacc actagcgccg
      601 gtcgtcgaag aagtatcaaa tatcatcacg tgggaactat tcactgacga agcatcgagt
      661 tctgagggag cgggtgcagg tctaatttta attggccctg acggagagga acatacctac
      721 gcgttgcgtt tcaagttccc cgcctccaat aatgaagcgg aatatgaggc attgctgtct
      781 ggtttgagaa tggctgaaaa gatgggaata aaatgcctaa aggtttcagt tgattcccaa
      841 ctcgtggcga atcagatgaa cgggatgttt gaagctaggg atccggctat gcaaaattat
      901 ttggcattgg cagaagaaat ggccaacaaa ttcgagcgtt tctcaataac gcaagtgccg
      961 cgatccttga acaaaaaggc cgacgcactc agcaaactcg catcaagcgt gttcagccac
     1021 ttcaccaagg acgttttggt ggaggtcctt actcaaaaat ccactgacgt ggtacaggag
     1081 gcagcccctg tagaagaggt cgagacgtgg atgagtccaa tcgttacgta tctcaagaac
     1141 aggatgttgc cattcgacgg ggcaacgcca cgtaagattc gtatgaaagc acctgtgtac
     1201 atgttaaggg atggagttat gttcaagaaa tccttcacgg caccgctttt aaggtgtgtc
     1261 ggcccaagcg aggcggaaac aattgtaagg gaggtgcatg aagggacttg tggcatgcat
     1321 gcaggattta ggaccgttgt ggggaaaata atgcggctag ggtatttttg gccgtctatg
     1381 taccgtgaca cgaaagagat catcaaagct tatgcttcat gccaacgtta cgccccgcaa
     1441 attcacatgc cggcgcatga gctaattccc gtgatgtttg cttggccctt ttacaaatgg
     1501 gaaattgatt tagtaggccc cttcccggat ggaaaacact tggtcgttgc aattgacttt
     1561 ttcaccaagt gggttgaagc caaaccttta aagagcataa cgggtataca gattgtgaat
     1621 tttgtttggg agaaaatcgt gtgctgtttc ggaataccac acgaaaatgt aaatggacaa
     1681 gtcgaagtca ccaacaggga tatcgttgcc gggataaggg caaggttgga cacggacagg
     1741 aaaggttggg cagatgagct tccacaagta ttatgggcat tccgaaccac gccaaaagga
     1801 agcaatcgag aaacgccatt cagccttata tatggtaccg aggcggtgat acccgctgaa
     1861 attgttgtcc caacccaacg tgtagtgcaa ttcaatgatg agtccaacgt cattagcttg
     1921 aaagaaaatt tggacttgtt ggaggaaatg cgtaacgccg ccgctatcag ggaagcgtca
     1981 aacaaacaga aaattgccaa gtattacaat taa
//
LOCUS       XM_071831524             651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450 Tp4149-like
            (LOC139841299), mRNA.
ACCESSION   XM_071831524
VERSION     XM_071831524.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139841299"
                     /note="cytochrome P450 Tp4149-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 42
                     Proteins"
                     /db_xref="GeneID:139841299"
     CDS             1..651
                     /gene="LOC139841299"
                     /codon_start=1
                     /product="cytochrome P450 Tp4149-like"
                     /protein_id="XP_071687625.1"
                     /db_xref="GeneID:139841299"
                     /translation="MYDFGVITIPHRSIQKSSKKYGPIMMIQLGTVHTLVISSPEAAK
                     EIYKTHDLLFSSRPLLTIPNLLSYGSKEIVFSTYGEHWRQLKSLVVQNILSTSRVKSF
                     HHVRKEEINATIRIVGESCGRVIDLTELLLSHSSNIICRVAFGRIYSEIKAEKAAKEF
                     DEFIEGIVEEHVSKKGWGQFAQSNNVQDDILLDIQPDKTTDFTLDKDTLKAVILNI"
     misc_feature    58..>648
                     /gene="LOC139841299"
                     /note="cytochrome P450 (CYP) superfamily; Region:
                     cytochrome_P450; cl41757"
                     /db_xref="CDD:477761"
ORIGIN      
        1 atgtatgatt ttggcgttat caccatccct catcgctcta ttcaaaaatc gtccaaaaaa
       61 tacggtccga taatgatgat tcaacttgga accgtacaca ctcttgtgat atcttctcct
      121 gaagcggcta aagagatcta taaaacgcat gatttattat tttctagtcg acccctttta
      181 actatcccca acttactatc atatggatct aaggaaatag tattttcaac ttatggcgaa
      241 cattggaggc aattaaagag cctagtggtt caaaatattt taagcacttc acgagttaag
      301 tcatttcatc atgttagaaa agaagagatc aatgctacga ttcgtattgt tggagaaagt
      361 tgtggccgtg tgatcgactt gactgaatta cttctttcgc actcaagtaa tataatttgt
      421 agggttgcat ttgggaggat ttatagcgaa attaaagcgg aaaaagctgc taaagaattt
      481 gatgagttta ttgaaggtat tgttgaagaa catgttagta aaaaaggatg gggtcaattt
      541 gctcaaagta ataatgttca agacgacatt ttacttgata tccaaccaga taaaacaacc
      601 gattttaccc ttgacaaaga tacgcttaaa gctgttatat tgaatatttg a
//
LOCUS       XM_071831525             615 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841300), mRNA.
ACCESSION   XM_071831525
VERSION     XM_071831525.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..615
                     /gene="LOC139841300"
                     /note="uncharacterized LOC139841300; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841300"
     CDS             1..615
                     /gene="LOC139841300"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687626.1"
                     /db_xref="GeneID:139841300"
                     /translation="MTSGVGHGRGKSLVVGTINWSRIFSMTSEMFICLIVWTSGLHPW
                     LQMFVPRKVNVFLWRFRLDSLPVRWLISAKGIDIHSIVCPVCNNEVETRDHLFFGCTL
                     ALDLWRRLRMWLNCAMPNFSSWDTFIVWIEGVHLSNIQKKRVIAYMVTLLWAMWRYRN
                     GVVFNDVFCNRNSLFDLIRLLCFRWIKNRGHLVSNWNSWLAIPL"
     misc_feature    <145..318
                     /gene="LOC139841300"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgacgagtg gcgttggaca tggtcgaggg aagtcattgg tagtcggaac gatcaattgg
       61 tcacgaatct tctcaatgac atctgagatg ttcatttgtc taatcgtgtg gaccagtgga
      121 cttcaccctt ggcttcagat gtttgtgcca agaaaagtta atgtgtttct gtggagattt
      181 agactcgatt cattgccggt tcggtggctc atctcagcta aaggtatcga cattcattcg
      241 attgtatgcc cggtttgcaa caacgaggtg gaaactcgtg accatttatt tttcgggtgt
      301 actttggctt tagatctttg gcgtaggcta cggatgtggt tgaattgtgc tatgccgaat
      361 ttctcttcat gggacacgtt cattgtatgg atcgaaggag ttcatttatc taatattcag
      421 aagaaacgag tcattgctta tatggttaca ctcctgtggg cgatgtggcg ctatcggaat
      481 ggtgtcgttt tcaacgatgt tttttgtaat aggaatagtc tttttgattt aattagatta
      541 ttgtgttttc gttggattaa aaataggggc catctagtgt ccaattggaa ctcgtggctt
      601 gctattccgt tgtaa
//
LOCUS       XM_071831526            1044 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841301), mRNA.
ACCESSION   XM_071831526
VERSION     XM_071831526.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1044
                     /gene="LOC139841301"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841301"
     CDS             1..1044
                     /gene="LOC139841301"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687627.1"
                     /db_xref="GeneID:139841301"
                     /translation="MVHGLLYKARLVANGQSQQVGIDCDETFSPVLKPATIRTVLSLA
                     ASRHWPIHQLDVKNVFLHGTLSETVYMHQPPGFRDLTRPDHVCLLQKSIYGLKQAPRV
                     LFQRFAEYAQRIGFQHSRCDTSLFIYKHGTDTAYLLLYVDDIILTASSTAFLHRVITS
                     LHQEFSMTDLCPLNYFLGISVTCTPSGMFLSQKKYASEIIERADMVGCNSSRIPISIG
                     TKLTTAGSPVKDPTLYRSLAGALQYLTFTRHDISYAVQQICLFMHDPREPHMATLRRI
                     IRYVQGTLDLGLQLFSSSTCSLVAYSDADWAGCPSTRRSTSGHCVFLGNNLLSCSSKR
                     QHTQSRSSVEAEY"
     misc_feature    19..645
                     /gene="LOC139841301"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    895..>1041
                     /gene="LOC139841301"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggtacatg gactcttgta taaggctcga cttgtcgcta acggtcaaag tcaacaggtt
       61 ggtattgatt gtgatgagac tttcagccct gttttaaaac cggccactat taggactgta
      121 ctcagtcttg ctgcatctcg acactggcct attcatcagc tagatgtcaa gaatgtgttt
      181 ctccacggta ctctctctga gactgtctac atgcatcagc cccccggttt tcgtgacctt
      241 actcgtcctg atcatgtttg ccttctgcag aaatctatat acggactgaa gcaagctcct
      301 agagtactgt ttcagcgatt tgccgagtat gctcagcgta ttggattcca acacagtaga
      361 tgtgacacat ctttattcat ctacaagcac ggcacggaca cagcctattt gttattatat
      421 gtggacgaca tcatcttgac tgcctcgtct acagcctttc ttcatagggt tatcacctct
      481 ttacatcagg agttctccat gactgatctt tgtccgttaa attattttct tggcatttct
      541 gtcacttgta ctccttctgg tatgtttctc tctcaaaaga agtacgcatc tgagatcatt
      601 gagcgtgcag acatggttgg ttgtaattct agtcgcatac cgatcagtat tggcaccaaa
      661 ctaaccactg ctggttcccc agttaaggat cccactttat atcgcagcct tgccggtgct
      721 ctacaatatc tcacttttac caggcatgat atctcttatg ctgtccagca gatctgtttg
      781 tttatgcatg atcctcgaga gcctcacatg gctactcttc gaaggatcat tcgctatgtc
      841 cagggcactc ttgatcttgg tctacaacta ttttcatcta gcacttgctc attggttgct
      901 tattctgatg ctgactgggc tggttgtccc tctactcgcc gctctacatc tggacactgt
      961 gtatttttgg gtaataatct actatcttgt tcttctaaac ggcaacatac tcagtcacgc
     1021 tccagtgtcg aagctgaata ctga
//
LOCUS       XM_071831527             819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841303), mRNA.
ACCESSION   XM_071831527
VERSION     XM_071831527.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..819
                     /gene="LOC139841303"
                     /note="uncharacterized LOC139841303; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841303"
     CDS             1..819
                     /gene="LOC139841303"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687628.1"
                     /db_xref="GeneID:139841303"
                     /translation="MSPKPGETLYLYVATSKECISTVLVVERERVQVPINFVSRVLQG
                     AEANYPELEKLTLALVHTARKLRRYFQAHPIIVLNNKQIRQVLMKPEKSGRMAKWAIE
                     LGNKIIIPPVETKEWKLFTDGASSSDGSGAELMLINPEGQEFTYALRFEFNTTNNEAE
                     YEALLAGLRIAKEMKIEHLKAFVDSQLVVNHVLGIFEARQPTIKLYLSKVRELMESFR
                     SFTIEYLQAFVDSHLIESVALTSLSSSTSFSRHTTSPDFCFKQDRTRWLYIVER"
     misc_feature    13..309
                     /gene="LOC139841303"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    349..672
                     /gene="LOC139841303"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(364..375,463..471,478..480,550..552,670..672)
                     /gene="LOC139841303"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgtcgccga agccaggaga aacactctat ctctatgtag caacatccaa agaatgcatc
       61 agtacggtgt tagtagtaga gcgagaaagg gtacaggtcc caataaactt cgtaagccgg
      121 gttctacaag gtgcggaagc caactatcct gaactcgaaa agctcacgct tgctctagtc
      181 catacagcaa ggaaactacg gaggtacttt caagctcatc ctatcattgt gttaaataac
      241 aagcaaatta ggcaggtact catgaagcca gaaaagtcgg gaagaatggc caaatgggcc
      301 atagagctcg ggaacaagat tatcattccg cctgttgaaa caaaggaatg gaaattgttc
      361 accgacggag cctctagctc tgatggctca ggggcagagc tcatgttaat taacccagaa
      421 gggcaagagt ttacttatgc actgcgcttc gaattcaaca caaccaataa cgaagcagag
      481 tacgaagctc ttctcgccgg gctccgaata gcgaaagaga tgaaaatcga gcatttgaaa
      541 gcctttgtag attcccaact tgttgtgaac catgtcctag gtatcttcga ggcaagacaa
      601 cctaccataa aactctatct atcaaaggtc agggagctaa tggaaagctt cagaagcttc
      661 acaatcgagt atttgcaagc ctttgtagat tcccacctca ttgagagtgt tgcattgaca
      721 tccctaagct cttccacctc cttctctagg cacacgacat cgccagattt ctgcttcaaa
      781 caggacagga cgaggtggtt atacatagta gaacgataa
//
LOCUS       XM_071831528             666 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841304), mRNA.
ACCESSION   XM_071831528
VERSION     XM_071831528.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..666
                     /gene="LOC139841304"
                     /note="uncharacterized LOC139841304; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841304"
     CDS             1..666
                     /gene="LOC139841304"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687629.1"
                     /db_xref="GeneID:139841304"
                     /translation="MNLINQQLIDLDILIDAGDENSKFYHCSLKHKRGVQNIQGLMLD
                     GVWEVEPGTIKSKFYEFYKAKFDEHCSGATFSHVDPYYKLSVDEANFLEREVDDAEIK
                     RDVWDCGSSKAPVQNPVLITDFRPISLVSFFYKIVSKILTKRLLPFIDKLISPVQSAF
                     IAGRQILDGSMMLSEIISWFKKVNKKLLLFKVDFEKAFDSVNWEYLIFMLSSLGYGSI
                     EIG"
     misc_feature    349..>630
                     /gene="LOC139841304"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgaatttga tcaaccaaca acttattgat ctagatatct taattgatgc aggagatgaa
       61 aattcaaagt tttatcattg ctcgcttaaa cataaacgag gtgttcaaaa cattcagggt
      121 ttgatgctag acggagtttg ggaggtcgag cctggcacta ttaaaagtaa gttttatgag
      181 ttctacaaag ctaaatttga cgaacactgt tcgggtgcta ctttttctca cgttgatccg
      241 tattataagt tatcggttga tgaagctaat tttcttgaaa gagaggtcga tgatgcggaa
      301 ataaaacgtg atgtgtggga ttgtggtagt tcgaaagctc cagtgcaaaa ccctgttctt
      361 attaccgatt ttcgtcccat ctccttggtt agtttctttt ataagattgt ttcgaagatt
      421 cttaccaaaa ggttactccc gtttattgat aaattaatta gcccggttca gtcagcgttt
      481 attgcaggac gtcagatttt agatggctcg atgatgttat ctgagatcat ttcatggttc
      541 aagaaagtta ataaaaagtt attattgttc aaggtagatt ttgagaaagc attcgattcg
      601 gtcaactggg agtatctaat ctttatgtta tcctccttgg ggtatggctc gattgaaatt
      661 ggataa
//
LOCUS       XM_071831529             810 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841305), mRNA.
ACCESSION   XM_071831529
VERSION     XM_071831529.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..810
                     /gene="LOC139841305"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841305"
     CDS             1..810
                     /gene="LOC139841305"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687630.1"
                     /db_xref="GeneID:139841305"
                     /translation="MTGLGPLHYFLGIHATRTAYGMFLSQKQYASEIIDRAGLTSSHP
                     CRTPVEPGATLTCHRPPVKDPTTYRSLAGALQYLTFTRPDISYAGTTDLGLQLYASST
                     TALVAYSDADWAGNNLLSWSSKRQLTPSHSSAEAKYRGIANAVAETCWIRNLLRELQC
                     PLTSATLGQVQVLHVPSRYHFADIFTKGLPFALFDEFRSNLNVRRAPAPTVRGYFRIF
                     RIADSDTNNMNTPSGDRVVMAVGDSGGLSVCGIVVNTEEREVKRQYCPCEQ"
     misc_feature    <1..150
                     /gene="LOC139841305"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    316..570
                     /gene="LOC139841305"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(328..339,394..402,409..411,559..561)
                     /gene="LOC139841305"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgactggct tgggtccgct tcactacttt cttggtattc atgccactcg tacggcgtat
       61 ggaatgtttc tctcccagaa acagtacgcc tccgagatca ttgacagggc aggcctgact
      121 tcctctcatc cgtgcaggac accggttgaa cctggtgcca cgcttacttg tcataggcca
      181 cccgtcaagg acccgaccac ttatcgcagc cttgcaggtg cattacagta tcttaccttc
      241 accagaccag atatatccta tgccggcacc actgaccttg gacttcagct atatgcgtct
      301 tctaccaccg ctctggttgc ttactctgat gctgattggg caggcaacaa cctcctatca
      361 tggtcctcaa agcgccagct cacaccgtct cattctagtg ctgaggcgaa atatcgaggt
      421 attgccaatg cagttgcaga aacatgctgg attcgtaatc tgcttcgtga gcttcagtgt
      481 ccgctcactt cagctacttt gggacaggtc caggttcttc atgttccatc cagatatcat
      541 tttgcagaca tcttcacaaa gggcttaccg tttgctttat ttgatgaatt taggtccaat
      601 ttgaatgttc gccgtgctcc cgctccaact gtgaggggat attttcggat ttttcgaatt
      661 gcggattcgg atacgaataa tatgaacacc cctagtggtg atagagtggt gatggcagta
      721 ggggatagtg gaggattgag tgtttgtggc atagttgtaa atacggagga aagagaagta
      781 aaaagacagt attgcccttg tgaacagtga
//
LOCUS       XM_071831530             951 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841306), mRNA.
ACCESSION   XM_071831530
VERSION     XM_071831530.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..951
                     /gene="LOC139841306"
                     /note="uncharacterized LOC139841306; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841306"
     CDS             1..951
                     /gene="LOC139841306"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687631.1"
                     /db_xref="GeneID:139841306"
                     /translation="MNSLPLYHLLLIFLLIKSPFLKPQSLPNNITFSPRFLDSQLQDY
                     AFRSFVTHRTITGKIYGGNVASTLTGITVSAVRLRSGALIRKGYFGYKEFNIPVGVFL
                     TPYVTRVVLVYQNLGNWSKDYYPLPGYLFLTPVVGILAYNASYFPAKRLPELNLRSSE
                     NPIMIKFESFGVLANGVVPKCVSFDLFGEIEFDHVVNGSVCLTVKEGHFGVVVEESAP
                     APENGLEEPIAVGSGGGDVGNGGEWWVGGVVGGGVMAGTVVMVMVWVVRRWRLQRMEG
                     KMECAAEGGAPLSVAAVGNVMVPVAMQTRTKPILENEYVL"
     misc_feature    97..642
                     /gene="LOC139841306"
                     /note="Protein of unknown function (DUF1191); Region:
                     DUF1191; pfam06697"
                     /db_xref="CDD:461989"
ORIGIN      
        1 atgaattctt tacctctcta ccatttacta ctcatatttt tactcatcaa atccccgttt
       61 ctaaaacccc aatcacttcc taacaacatc acattttcac caagatttct tgattcacaa
      121 cttcaagact atgcatttag atcatttgtt acgcaccgaa caataaccgg aaaaatctac
      181 ggtggaaatg tcgcttctac cctcaccgga atcacagttt ccgcagttcg tcttagaagt
      241 ggtgcattga ttagaaaagg gtattttggg tataaagagt ttaatattcc cgttggtgtt
      301 tttttgactc cttatgttac aagggtagtt ttggtatacc aaaatttagg taattggtct
      361 aaggattatt acccattacc agggtattta tttttaacac cagtggtggg tatactagct
      421 tataatgcgt catattttcc ggcgaaaagg ttgccggagt tgaacctccg gtcatcggaa
      481 aatccaataa tgatcaagtt tgaatctttc ggtgttttag caaatggggt tgtgccaaaa
      541 tgtgtgtctt ttgatttatt tggtgagatt gagtttgatc atgtggtgaa tgggagtgtt
      601 tgtttgactg tgaaagaagg gcattttggg gtggttgttg aggagagtgc accggcgccg
      661 gaaaatggac tggaggagcc aattgcggtg ggtagtggtg gtggtgatgt tggtaatggg
      721 ggtgagtggt gggtgggtgg ggtggtagga ggtggggtca tggcggggac ggtggtgatg
      781 gtgatggtgt gggtggtgag aaggtggagg cttcaaagga tggagggaaa aatggaatgt
      841 gcggcggaag gtggtgctcc attgtcggtg gctgccgtgg ggaatgtgat ggtgccggtg
      901 gcaatgcaga ctaggactaa accaattttg gaaaatgaat atgtgttata a
//
LOCUS       XM_071831531             384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841307), mRNA.
ACCESSION   XM_071831531
VERSION     XM_071831531.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..384
                     /gene="LOC139841307"
                     /note="uncharacterized LOC139841307; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841307"
     CDS             1..384
                     /gene="LOC139841307"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687632.1"
                     /db_xref="GeneID:139841307"
                     /translation="MPWLLCGDFNEVRSQSERFNSVYNSCWANKFNEFIDKMGLIDIP
                     LGGKKFTRVCDNGIKFSKLDRFLISEEFNLCWPYLSATVLERKSSDHAPIILRNDSFD
                     YGPKPIRVFNEWLKIDGAADDVEST"
     misc_feature    <10..291
                     /gene="LOC139841307"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgccgtggc ttctatgcgg tgactttaac gaggttagat cacaatccga aagattcaac
       61 tctgtataca atagttgttg ggcaaataaa tttaatgagt tcattgacaa gatgggtctt
      121 atcgatatcc ccttaggggg aaagaagttc acccgtgtgt gtgataacgg aatcaaattc
      181 agcaaattgg acagattttt gatatctgaa gaattcaact tatgttggcc ttatttatct
      241 gctactgttc tcgaaaggaa atcctcagac cacgcgccaa ttatcttgcg caatgactct
      301 tttgactacg ggcccaagcc catcagggta tttaatgagt ggttaaaaat tgatggtgct
      361 gcagatgatg ttgagtctac atag
//
LOCUS       XM_071831532             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841308), mRNA.
ACCESSION   XM_071831532
VERSION     XM_071831532.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139841308"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139841308"
     CDS             1..585
                     /gene="LOC139841308"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687633.1"
                     /db_xref="GeneID:139841308"
                     /translation="MIDLGPLNYFLGITVTRTASGMFLSQKQYATEIIERAGMPTCHP
                     CRTTVKPGAKLTSHSPAVKDPTLYRSLAGALQYLTFTCPDISYAVQQICLFMHDPREQ
                     HMHALKRIIRYIQGTIDLGLQLYASSPTTLVAYFDADWAGFPTTRRSPSGYCLFLGNN
                     LLSWLSKRQLTPSRSSAEAEYRGVANAVAETCWV"
     misc_feature    <1..141
                     /gene="LOC139841308"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    397..>579
                     /gene="LOC139841308"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgatagatt tgggcccttt gaactatttt cttggtatta ctgtgactcg tactgcctcc
       61 ggaatgttct tatctcagaa acagtacgct accgagatta ttgagcgggc gggtatgccc
      121 acatgtcatc cttgcaggac cacagttaaa ccaggggcca aacttaccag tcacagccct
      181 gctgtgaaag acccaactct gtaccgcagc cttgcaggcg ctttacagta tctcacattt
      241 acttgtcctg acatctctta tgccgtacaa cagatttgcc tcttcatgca tgatcctcgc
      301 gagcagcata tgcatgccct caaacggatc attcgctata ttcagggcac tatcgatctt
      361 ggtctacagc tctatgcgtc ttctccgact acattggttg cttactttga tgctgactgg
      421 gctggcttcc caactactag acgctctcct tctggttatt gtctttttct cggcaacaac
      481 cttctatcat ggttgtccaa acgacaactc acgccctccc gttccagtgc agaggcagaa
      541 taccgtggag ttgccaatgc tgttgccgag acttgctggg tttga
//
LOCUS       XM_071831533             765 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841309), mRNA.
ACCESSION   XM_071831533
VERSION     XM_071831533.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..765
                     /gene="LOC139841309"
                     /note="uncharacterized LOC139841309; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841309"
     CDS             1..765
                     /gene="LOC139841309"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687634.1"
                     /db_xref="GeneID:139841309"
                     /translation="MQSNPNNKGPVRNEQVNAITTRSGLVINEETPKSPLVVSPVVSP
                     TILQVYKAPIPYHKALKKDKLANQYKKFLDMINQISINMPLAKVIKGMPNYGKFLKDL
                     ISSKGKYQEVSATFLNEACSPILQKQKMPPKLGDPGSFIIPCFLGDSVVYDALADLGE
                     NVNLMPYSLYLKLGLGDLKPTRMGIHLANHSFDTPIGIAEDLIVRVSHPCPNKEPLIF
                     PTNFVLLEMKEDTKMPIILGRPFLNTADAIIHVQQN"
     misc_feature    424..729
                     /gene="LOC139841309"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(469..471,475..477,481..483,553..561,706..708)
                     /gene="LOC139841309"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    469..477
                     /gene="LOC139841309"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    469..471
                     /gene="LOC139841309"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(553..564,574..585)
                     /gene="LOC139841309"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcagtcta atccgaacaa caagggaccg gttagaaatg agcaagtgaa tgccataacc
       61 acccgaagtg gtttggttat taatgaggag acaccgaagt ctcctcttgt cgtttctcct
      121 gttgtttctc ctactatttt acaggtgtac aaagcaccga ttccatatca taaagctcta
      181 aagaaagata agctggcaaa tcaatacaag aagttcttag acatgatcaa tcaaatcagc
      241 atcaacatgc cattggcaaa agtgataaaa ggaatgccca actacgggaa gtttctaaag
      301 gacctgatct cttcgaaagg taagtaccaa gaggtgtcgg ccacgttcct caatgaggca
      361 tgttcaccta ttttgcaaaa gcaaaagatg cctcctaaat tgggagaccc gggtagcttt
      421 atcatcccct gttttttggg agattcggta gtgtacgatg cactagccga tttaggggaa
      481 aatgttaatt taatgccgta ttcattatac ttgaaacttg gcctaggcga cttgaagccg
      541 actaggatgg gtatccattt ggccaaccac tctttcgaca ctcccatagg gatagccgaa
      601 gacttgatag taagagttag ccacccttgt ccaaacaagg aaccattaat ctttccgacc
      661 aattttgtat tgcttgaaat gaaagaggac actaaaatgc caatcattct aggtcgtccg
      721 ttcctaaaca ccgctgatgc tattatccat gttcaacaga actaa
//
LOCUS       XM_071831534             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841310), mRNA.
ACCESSION   XM_071831534
VERSION     XM_071831534.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139841310"
                     /note="uncharacterized LOC139841310; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841310"
     CDS             1..441
                     /gene="LOC139841310"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687635.1"
                     /db_xref="GeneID:139841310"
                     /translation="MSVRVELDKRGIDLHSLLCPLCDDDIETVEHSLIFYTHTREIWE
                     KVFNWWGLGNFSCYDIQQLLSGSGHASSSCFGRKIWQALKWICSYLIWQNRNSKVFHG
                     NSWISPVALCDIQIKSFGWISSRAKGKNLDWLTWLSNPISYINL"
ORIGIN      
        1 atgtcggtaa gagtcgaact tgataaaagg ggcatagatt tgcacagttt gctttgcccc
       61 ttgtgtgacg atgatatcga aacagtcgag cactctctta ttttctatac gcacacgcgg
      121 gagatttggg aaaaagtgtt caattggtgg ggtttgggaa atttttcttg ctacgacatt
      181 cagcagcttc taagtggcag tggacatgcc tcctcatcgt gctttggaag gaagatttgg
      241 caagctctaa agtggatttg ctcgtatttg atatggcaaa accggaatag caaagtgttt
      301 catggtaact cttggatctc tccggtggcg ttatgcgata tacaaatcaa gtccttcggg
      361 tggatctctt ctcgggcaaa aggaaaaaac ctcgattggc ttacgtggtt atctaatccc
      421 atctcttata tcaacttgta a
//
LOCUS       XM_071831535            1971 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides NAC domain-containing
            protein 78-like (LOC139841311), mRNA.
ACCESSION   XM_071831535
VERSION     XM_071831535.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1971
                     /gene="LOC139841311"
                     /note="NAC domain-containing protein 78-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841311"
     CDS             126..1754
                     /gene="LOC139841311"
                     /codon_start=1
                     /product="NAC domain-containing protein 78-like"
                     /protein_id="XP_071687636.1"
                     /db_xref="GeneID:139841311"
                     /translation="MASLIDPTPAPTSLAPGFRFHPTDEELVQYYLRRKVCGKPFRFD
                     AIADVDVYKFEPWDLPGLSRLRSRDLEWYFFSVLGKKSKHGSRPNRATEKGYWKTTGK
                     VRVVCYRSQQIGMKKILVYHSGRAPKGEKTNWVMHEYRLIDHELQNSGVVQNTFVLCR
                     ICQKCGSGPMNGEKYGAPFIDEEWEDDETVFVPEHEVCAKELPIDMDFCSDPFDVEQN
                     FYSAVEDGPLPPSIVCSINMNPADISTIVTSDPLNYLVGPSECEPQVNQNDGSTSLDL
                     PVQTGLDTESVNCVFMEEPSNNMNFDVDCLFDEPYYDATGDFSLDESLSFQAGNLKNV
                     VETDSGLDILDEYTSLLNPDFDNYFDPVGTENTLPDSSVPRENVNGGTHQLTNTSQPF
                     ERQNDNLAAANRGNQDQKTDTAHSYLKKASYMLGNISAPPAFASEFPTKYIDSAFQAS
                     NLLNVTSSMIRTGNVSFNGGAVDLSLRKHTQLNIVLSFGLGQQEVSYATSHQVVKPNP
                     MGSRSWFYCVFVSILVLSLSFKIGSLVCSRSFMS"
     misc_feature    171..548
                     /gene="LOC139841311"
                     /note="No apical meristem (NAM) protein; Region: NAM;
                     pfam02365"
                     /db_xref="CDD:460539"
ORIGIN      
        1 tccaacctca atgtcgaaac cctaactgaa acctcaaccc taattcgtaa ttcccctcct
       61 tttgtcacct aaattttcaa ctttttctta attacaacca aaaaacctag cttcattata
      121 cttttatggc atcattgatt gatccgacac cagcacctac atcacttgct cctggattca
      181 ggtttcatcc gaccgatgaa gagcttgtac agtactatct caggcgtaag gtttgtggta
      241 aaccgtttcg attcgatgcc attgctgatg ttgatgtata taaatttgag ccctgggatc
      301 ttccaggttt gtcaaggttg agaagtagag acttggaatg gtactttttt agtgtgcttg
      361 gtaagaaaag taagcatggt tcccggccaa atcgggctac tgagaagggt tactggaaga
      421 ctaccggaaa ggtccgagtt gtatgctata ggtctcaaca gattgggatg aagaaaattt
      481 tggtttatca tagtggccgg gccccaaaag gcgagaaaac aaactgggtt atgcatgaat
      541 atcggctcat tgatcatgag ctccaaaatt ctggagttgt gcagaacaca tttgtcctgt
      601 gtcgaatctg tcaaaaatgt ggttctggac ctatgaatgg tgaaaagtac ggggcaccat
      661 ttatcgatga ggagtgggaa gatgatgaga ctgtatttgt tcccgagcac gaagtttgtg
      721 ctaaggaatt acctattgat atggattttt gttcagatcc ttttgatgtt gagcagaatt
      781 tttactcagc agtagaagat ggtcctcttc ctccaagtat cgtttgcagt attaacatga
      841 accctgctga tatatcaaca atcgtgacta gtgaccctct aaattatttg gtgggtccaa
      901 gtgaatgtga acctcaggtt aaccaaaatg atggatcaac ctcacttgat ttgcctgtgc
      961 agactgggtt ggataccgag tctgtgaact gtgtatttat ggaagaacct agcaataaca
     1021 tgaattttga cgttgattgt ttgtttgatg aaccatatta tgatgctact ggtgacttct
     1081 cacttgatga aagcttaagt tttcaagctg gtaaccttaa aaatgttgtg gagacagatt
     1141 ctggccttga tatacttgat gagtatacct cgctcttgaa tccagatttt gacaactatt
     1201 ttgatccggt cggaaccgag aacactctcc ctgattcatc cgtacctcgt gagaacgtga
     1261 atggtggaac ccatcaattg accaatacaa gccagccatt tgaaagacag aacgacaatt
     1321 tggctgctgc aaatcgagga aatcaagatc aaaaaacaga tactgcacac tcgtatctca
     1381 aaaaggcaag ttacatgctg ggtaacattt ctgccccacc cgcatttgca tccgagttcc
     1441 ctacaaaata cattgattct gcttttcaag cttcaaattt gttgaatgtc acgtctagta
     1501 tgatccgtac cgggaatgtc tctttcaatg gtggtgccgt cgacttgtcg ctgcgcaagc
     1561 acactcaact caatatagtt ctgtcgtttg gattgggtca acaggaggtc agttatgcta
     1621 cctcacatca agttgtgaag cccaatccaa tggggtctcg aagttggttt tactgtgtgt
     1681 ttgtgtcgat tctggttctt tctttgagct tcaagattgg gagtctggta tgctctaggt
     1741 cattcatgag ctgaatgatc aaatctgact atagcaacaa aactaaaaag tgttcttgac
     1801 cagtgtaagc ttatttacct agattttcag taggtttttg aaaaagaatg gcttgttatt
     1861 ctagacttga gatgttgtat tgacaactac tccgtattaa accgagtcct agctatcaag
     1921 tatatagact aacaaacttg agtttgtgta tatttatatt ggtcgtgtta t
//
LOCUS       XM_071831536            4482 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841312), mRNA.
ACCESSION   XM_071831536
VERSION     XM_071831536.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 50% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4482
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4482
                     /gene="LOC139841312"
                     /note="uncharacterized LOC139841312; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841312"
     CDS             43..4482
                     /gene="LOC139841312"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687637.1"
                     /db_xref="GeneID:139841312"
                     /translation="MESWISKSIHSFITMAISDFYELNSNYRTRIVIHTRDSGGKPLQ
                     ALSAVLDLLNNIKVKAIIGPETYLEANLLAPVSDNSKVPIFTFAGSSSMDYPYLFQIK
                     EDESDLSKTITALVVSYKWKDIIYLYEDVHYWREMLSYLLESLQYKNIHVGHTSAVPA
                     SATDDQIIQELQIIKISQTSVVIVHMSSSLAYRVLLIAKSLGMVSEKNAWIVTYKSID
                     ILQTENNEIIESMEGIIGLRSYIPSSSKLLNLTARLHNEFSLREVNVLSVWAYDTIWA
                     LAESIERLGTKFSFNTTQIDSIILNELSRTKFKGLSGEFRLINGKLASNGFKIVNVKA
                     NVETGDSKITPKRRILQTVTNKTLKVGVLSRRVFNYFIDTHFNNQTNVTTATGFSVDV
                     FNACINGLPYEVPYELIPYADGTYDDLIKKVYDQEIDAILGDSTILENRSQYVDFTAT
                     YTDLGEIWDALQGCDSSKAPGPDGFNMKFLKKYWWLVKEDLTAALDWFWLHSEISKGC
                     NASFFTLIPKKSNPIGFNEYRPICLIGCYYKILTKLLSNRLAKIIHKIIGSEQTAFLK
                     GRNILDSVLIANEIIDELKRKKQKGLIFKVDFEKAFDCIEWDFLFNTMKSLGFGIKWI
                     SFIKACLSSSTISILINGSPTREFTPGRGIRQGDPISPFLFIIAAEGLNILVKRAITK
                     NQFRGIRVGHDEIVISHLQYADDTIFFGEWSKRNSKNIAKLLKCFENISGLKVNLKKS
                     SLYGIGVPKPEVEDMAKAIDCSAGSTPFTYLGLPIGVPSTKASSWHPIIEKFEKRLSD
                     WKAKTISYGGRLTLIKSVLSSLPLYYFSLFHAPTKVINSLEAIRRKFFWGGSESNNKI
                     NWIKWELILSPYDKGGLNIGSLFCKNISLLCKWWWRFHNEKTALWVKIISSIYGAGGG
                     ICTNDFSRKVSGRTIWNEIIKAGKIADNIGISFSSSINKCIGNGSNTKFWTDIWCGTE
                     PLNNLFRRLYMLDSNKNASVADRLTLSNTITHGSWAWTRTPTGRGLRELTELNNLISS
                     ISLTEAPDSWKWNLDPSGSFSTKMLSHILDNLKLATSHSSTPTPRNKFLPQKICIFIW
                     RVINGRIPTRSELDKRNIDLDSILCPICEAQIESIDHILFLCPKTTQIWSSILQWWKL
                     PNNLLTNFSDITSINQNLSSNQTGTLARINQNDMWIFLRPLDVDLWLSTICFAMLTGI
                     AIVAIESMHQGSLRSPTQQIGATFWFILMTLFFTQREKLASNLAKFVAFVWLSVVLIL
                     ISSYTATLASLLTVEQFEFASKGGTVGFHGGSFVSGVIVENYNFEDYRHRPYYSYEAY
                     ADALSKGGKHGGADAIVDEVPYIKMFLGRHSSDYAMLSSEPITSGFAFIFQKGSPLVR
                     DVSRQIAKIRENRTLERIEKEWFEKESSSSQDLPTNPKTLNFGRFRGLFLISGISSAF
                     ALMISVILSICAKLEIHNVISFVLQHNLLANLRHLLHRNVIRI"
     misc_feature    43..1038
                     /gene="LOC139841312"
                     /note="Type 1 periplasmic binding fold superfamily;
                     Region: Periplasmic_Binding_Protein_type1; cl10011"
                     /db_xref="CDD:471960"
     misc_feature    1108..>1407
                     /gene="LOC139841312"
                     /note="Type 2 periplasmic binding fold superfamily;
                     Region: Periplasmic_Binding_Protein_Type_2; cl21456"
                     /db_xref="CDD:473866"
     misc_feature    1582..2367
                     /gene="LOC139841312"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1831..1848,2008..2013,2146..2148,2152..2157,
                     2353..2358)
                     /gene="LOC139841312"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1831..1848,2008..2010,2152..2154)
                     /gene="LOC139841312"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    2011..2013
                     /gene="LOC139841312"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <3268..3450
                     /gene="LOC139841312"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
     misc_feature    3604..4338
                     /gene="LOC139841312"
                     /note="Ligand-gated ion channel; Region: Lig_chan;
                     pfam00060"
                     /db_xref="CDD:459656"
     misc_feature    <3880..4245
                     /gene="LOC139841312"
                     /note="Type 2 periplasmic binding fold superfamily;
                     Region: Periplasmic_Binding_Protein_Type_2; cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 ttgaatgacc aagttttagt tcgtgttgga atcgttcttg atatggagtc atggatctca
       61 aagtccattc acagcttcat aacaatggca atatctgatt tttatgaact caatagcaat
      121 tacagaacga ggatcgttat ccacacaagg gactctggtg gtaaaccgct acaagctcta
      181 tcagctgtgc ttgatctttt gaataacatt aaggtaaaag caatcatagg ccccgaaaca
      241 tatcttgaag caaacttatt ggcgccggtt tcagataatt ctaaagttcc tatatttacc
      301 ttcgcggggt cttcctccat ggattatcct tacttgtttc aaatcaaaga agacgaatca
      361 gatttgtcta aaaccattac cgctcttgtg gtatcataca aatggaaaga tataatatac
      421 ttatatgaag atgtccatta ttggcgggaa atgttgtcct atcttttaga atctttgcaa
      481 tacaaaaaca tccacgttgg tcacacaagc gcagttcctg catcggctac tgatgatcaa
      541 atcattcaag agttgcaaat tataaagatt agtcaaacaa gtgtagttat agtacatatg
      601 tcgtcttcat tagcttatag agttctctta attgcgaaaa gtttaggaat ggtgagtgag
      661 aaaaacgctt ggattgtaac gtacaaatcc attgatatcc tgcaaaccga gaataatgaa
      721 attatagagt caatggaagg aataataggt ttaaggtctt acattccatc atcgagcaag
      781 cttttaaact taacggcacg attgcacaat gaattttcat taagagaggt aaatgtgctt
      841 tccgtatggg catacgacac aatttgggca ctagcagagt ctattgagag actcgggact
      901 aaattctcat ttaataccac tcaaattgat tcgattattc taaatgagct ttcaagaaca
      961 aagtttaaag gtttaagtgg cgagtttcgt ttaattaatg gaaagttagc ttctaatgga
     1021 ttcaagattg taaacgtgaa agcgaatgta gagacaggag actctaaaat cactccgaag
     1081 cgtcggattt tgcaaactgt tactaataaa actttaaaag ttggtgtttt atcaagaaga
     1141 gtgtttaatt acttcataga tactcatttt aataaccaga caaatgtaac aacggccact
     1201 ggtttctctg tcgacgtgtt caatgcttgc attaatgggt taccgtatga agtaccatac
     1261 gagttaattc cgtatgctga tggaacttat gatgacctta taaagaaggt ttatgatcag
     1321 gagattgatg ctatattggg tgattcaacg attcttgaga acagatcgca atatgttgat
     1381 tttacggcaa cttacaccga tttaggagaa atatgggatg ccctacaagg atgcgacagc
     1441 tctaaagctc ccggccccga cggattcaac atgaaattcc ttaaaaaata ctggtggcta
     1501 gtaaaagagg acctaactgc ggctcttgac tggttttggt tgcattctga gatatccaag
     1561 ggttgcaacg catctttctt cacactcatt cctaaaaaat ctaatcctat aggatttaac
     1621 gaataccgac cgatatgcct catcggttgc tattacaaaa tcctcacaaa gcttctctct
     1681 aaccgtctcg caaaaataat ccataaaata ataggttccg aacaaacggc attcctaaaa
     1741 ggtcgcaaca tcctagatag tgtactcatt gccaacgaaa ttatagacga actaaaacgt
     1801 aagaaacaaa aaggtcttat ttttaaagta gactttgaaa aagcatttga ttgtatagaa
     1861 tgggacttcc tcttcaacac tatgaagagc ttaggcttcg gaatcaaatg gataagtttc
     1921 attaaagcat gtctctcctc ctccacaatc tctattctaa tcaacggttc ccccacacgt
     1981 gaattcaccc ccggtagggg catccgccaa ggtgatccaa tctccccatt cttgttcatc
     2041 attgcagccg aagggcttaa catcctcgtc aaacgtgcca tcacaaaaaa ccaattccga
     2101 ggtatccgcg tcggacatga cgagattgtt atttcccatc ttcaatatgc agatgacaca
     2161 atcttcttcg gcgaatggag caaacgaaac tctaaaaaca tcgctaaact gttaaaatgc
     2221 ttcgaaaaca tctctggctt aaaagttaac ctaaaaaaaa gtagcctcta cgggatcggg
     2281 gttcccaaac cggaagtgga agatatggcc aaggccatcg actgttcggc gggctctacc
     2341 ccattcacgt acctcgggtt acctattggt gtcccatcta ctaaagcatc atcatggcac
     2401 cccatcattg aaaaattcga aaaacgcctc tccgattgga aagccaaaac catatcctat
     2461 ggcggtcggc tcactttaat aaaatccgta ctttcaagcc taccactcta ttatttctcc
     2521 ctatttcacg cacctaccaa agtcattaac tctctagaag caattagaag aaaattcttt
     2581 tggggcgggt ccgaatcaaa caacaaaatt aattggataa agtgggaatt aatcttatca
     2641 ccatatgaca aaggagggct taacattgga tccttatttt gtaaaaacat ttctttactt
     2701 tgtaaatggt ggtggaggtt ccacaacgaa aaaaccgctt tatgggtaaa aataatctcg
     2761 agtatttacg gggcgggggg cgggatttgc actaacgatt tttctagaaa agtttcaggt
     2821 agaacaattt ggaacgagat cattaaagca gggaaaatcg cggacaacat cggaattagc
     2881 ttctcatcct cgatcaacaa atgcattgga aatggctcga acaccaaatt ctggaccgac
     2941 atttggtgtg gtacggaacc actcaacaac ctgttccgaa ggctatacat gctcgactca
     3001 aacaaaaacg cttcagtcgc ggaccgtctc acactctcca acacaatcac acacggttca
     3061 tgggcttgga ctcgtacacc taccggacgt ggacttcgcg agctaactga actaaacaat
     3121 ctcatatcat ccatctccct taccgaggcg ccggattcat ggaaatggaa cctcgaccct
     3181 tccggttcct tctctacaaa aatgctatct catatccttg ataacttaaa actcgcaact
     3241 tcacacagtt cgacaccaac acctagaaat aaattcttac cacaaaaaat ctgcattttc
     3301 atatggcgtg tcataaacgg tagaatacca actagatccg aactcgacaa aagaaatatc
     3361 gaccttgact caatattgtg cccaatttgc gaagcgcaaa tcgaatccat agatcatatc
     3421 ctctttctat gtccaaaaac cactcaaata tggagttcca ttctacaatg gtggaagctc
     3481 cccaacaact tactaactaa cttctccgac attacatcaa tcaaccaaaa cctctcctcc
     3541 aatcaaaccg gaacacttgc aagaatcaac caaaatgaca tgtggatctt cttgaggcca
     3601 cttgatgtgg atctttggct aagcaccatt tgttttgcca tgcttaccgg tatcgccatt
     3661 gtcgctattg agtcgatgca tcaagggtcc ttaagatcgc caactcagca gattggagca
     3721 accttttggt tcatattaat gaccttattt ttcactcaaa gagagaaact ggctagtaat
     3781 cttgcaaagt ttgtggcgtt tgtttggtta tcagtcgtac ttattctgat atcgagttac
     3841 actgcaacat tggcttcact actaaccgtt gaacagttcg agtttgcatc aaagggcgga
     3901 actgtaggat ttcatggagg ctcttttgta tcaggagtga ttgtagaaaa ctataacttt
     3961 gaggattata ggcatagacc ttactattca tacgaagcat atgcagacgc tttatcaaaa
     4021 ggtggaaaac atggtggtgc tgatgcaata gtcgatgaag tcccctacat taagatgttt
     4081 cttggacggc attcgtctga ttacgccatg ctgtcatctg aacctatcac ttctggtttt
     4141 gccttcattt ttcaaaaagg gtctcctttg gtaagggatg tgtcaaggca aattgctaaa
     4201 ataagggaaa atcgaactct cgaacgtatt gagaaggaat ggttcgagaa agagtcctcg
     4261 tcgtcccaag atcttccaac aaacccgaaa accttaaatt ttggaaggtt tcgaggcttg
     4321 tttcttatta gtgggatctc ttcggctttc gccctaatga tatcagtgat tttgtcaatt
     4381 tgtgcaaaat tagagattca taatgtcatt tctttcgtcc tgcagcataa tttgctggct
     4441 aatttgaggc atcttttgca tagaaatgtc attaggatat aa
//
LOCUS       XM_071831537             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841313), mRNA.
ACCESSION   XM_071831537
VERSION     XM_071831537.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139841313"
                     /note="uncharacterized LOC139841313; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841313"
     CDS             1..555
                     /gene="LOC139841313"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687638.1"
                     /db_xref="GeneID:139841313"
                     /translation="MVNDNPKIWQRKLDDALWAFRTAFKTPIGITLFLLVYRKVCHLL
                     VELEHRTYWALKNCNIDLEKAGESRMLQLNELDELRSDAYESSVLYKEKTKRWHDVRL
                     RDRKEFVPGDKVLVFNSHFKFSPEKLKSRWTGPYEVEREFPTGYVELIGNGNTFKVNG
                     HRLKLYFDGVVIDKYDDITLYPKS"
ORIGIN      
        1 atggttaatg ataatccgaa gatatggcaa cgcaaattag atgacgcgtt gtgggctttc
       61 cgaaccgctt tcaaaacgcc tattggaatc acactgtttc tacttgtata tagaaaagtg
      121 tgccatcttc tagttgaatt agaacataga acgtattggg cgttgaagaa ttgtaatata
      181 gatttagaaa aagcaggaga aagtagaatg ttgcaattga atgaattgga tgagttgagg
      241 tcggatgcat atgagagttc ggtcttgtat aaagagaaaa ctaaacggtg gcatgatgtc
      301 cgtttaagag ataggaagga atttgtcccg ggggataagg tccttgtttt taattcgcat
      361 tttaaatttt cccccgaaaa gttgaagtcc cgttggacgg gaccttatga ggtcgagaga
      421 gaatttccga caggttatgt tgagttaata gggaatggca atacgtttaa ggtgaatggt
      481 catcgtctaa aactctattt tgatggagtt gttattgaca agtatgatga catcaccctg
      541 tacccgaaaa gttaa
//
LOCUS       XM_071831538             690 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841314), mRNA.
ACCESSION   XM_071831538
VERSION     XM_071831538.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..690
                     /gene="LOC139841314"
                     /note="uncharacterized LOC139841314; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841314"
     CDS             1..690
                     /gene="LOC139841314"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687639.1"
                     /db_xref="GeneID:139841314"
                     /translation="MDHSALKYLFSKPDAKPRLLRWIFLLQEFDIEIRDKKGVENLAA
                     DHLSRLENPHLKVLHELSIHDDFPDEYLMKIDKVDEPWYVDIANYLVGKFLEKMWSHQ
                     KRKKFFSHLKHYFWKDPYLFPCCPDGIIRRCVSGEECTRILLKCHFGLTGGHFGPQIT
                     GKKVYEVGFYWPSILKDAHSICKSCDACQRAGKVTKHDEMPQQSIQVCEAFDIWGIDF
                     MGPFSKSHNYL"
     misc_feature    <4..150
                     /gene="LOC139841314"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    400..573
                     /gene="LOC139841314"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggaccatt ctgctttaaa gtacctcttc tcgaaaccgg atgccaaacc tcgattgctt
       61 agatggatct ttcttttgca agaattcgat atcgagatcc gagataaaaa gggtgtcgag
      121 aatcttgcgg ctgaccactt gtctagacta gagaatccac atctcaaagt ccttcatgag
      181 ttgagtattc acgatgattt tcccgatgag tatctcatga agatcgacaa ggtggacgag
      241 ccatggtatg ttgacattgc caattatctt gttgggaaat tcctagagaa aatgtggtca
      301 catcaaaaga ggaagaaatt tttcagtcac cttaagcact atttctggaa ggatccctat
      361 ctttttcctt gttgtccgga tggaatcatt cgaaggtgcg tttccggtga ggaatgcact
      421 cgtattttgt tgaagtgcca ttttggcctg acaggtgggc attttggtcc ccaaatcacg
      481 ggtaagaagg tgtatgaggt tggtttttat tggcctagta ttttgaagga tgcccattcc
      541 atttgtaaat catgtgacgc ttgtcaacgg gctggaaaag tcaccaaaca tgacgaaatg
      601 cctcaacaaa gcatccaagt atgtgaggcg tttgacattt ggggcattga ttttatgggc
      661 ccgttttcta aatcccataa ctatctctag
//
LOCUS       XM_071831539             411 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841315), mRNA.
ACCESSION   XM_071831539
VERSION     XM_071831539.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..411
                     /gene="LOC139841315"
                     /note="uncharacterized LOC139841315; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841315"
     CDS             1..411
                     /gene="LOC139841315"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687640.1"
                     /db_xref="GeneID:139841315"
                     /translation="MATHDREYVFFGDFNEVREEAERFGSLFNADEANVFIQFLGDTG
                     LLDVPLGGRRFTWINKSVSKMSRIDRVLVSSNVQNWFMDLKLVVLTKGWSDHLPLIFH
                     NAKLDFGPIPFKCFNSWLDNGDFISVVKEAVGSE"
     misc_feature    <34..306
                     /gene="LOC139841315"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atggcgactc atgatcggga atatgtgttt tttggcgatt ttaatgaagt cagggaagaa
       61 gcggaaaggt ttggatcctt atttaatgcc gatgaagcta atgtttttat tcaatttttg
      121 ggtgatacgg gtcttttaga tgtaccacta ggtggtagga gatttacgtg gattaacaaa
      181 tcggtttcta aaatgagccg cattgatcgg gtccttgtat catctaatgt gcaaaattgg
      241 ttcatggatc tcaagctagt cgttttaact aagggttggt cggatcatct acctttgata
      301 tttcataacg ctaagcttga ttttggaccg attcccttta aatgtttcaa ctcatggtta
      361 gataatggtg atttcattag tgttgtcaag gaggctgtcg gatcagaata a
//
LOCUS       XM_071831540             819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841316), mRNA.
ACCESSION   XM_071831540
VERSION     XM_071831540.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..819
                     /gene="LOC139841316"
                     /note="uncharacterized LOC139841316; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841316"
     CDS             1..819
                     /gene="LOC139841316"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687641.1"
                     /db_xref="GeneID:139841316"
                     /translation="MHWVRWDQVIAPLEYGGLGIGGLQAFNQALTLKWVWRFVKYPDS
                     KWAKIIRALYGEKAGLDGNILRGSSVWCSIVKLFYKVKSGGVIPNNILRVKIGNGRNT
                     RFWVDNWKRDGTLKDKYKRIYHLKRNKNCTIADRFVNIEWKWEWVREHISTRNSSMLS
                     SLMTDLYGIACNDDNDAWEWSICDDGYYKVNQTRSFIDNSYLHDAKINTRWCKLIPRK
                     VNIFAWRVMLNRLPTHLNLSTMGMVLDHLSCVLCGCHSESISHVLFECPIAQEL"
     misc_feature    <631..816
                     /gene="LOC139841316"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcattggg taaggtggga tcaagtaatt gcgcccttag agtatggcgg cttgggaatt
       61 ggtggattac aggcatttaa ccaagcactt actctcaaat gggtgtggcg gtttgttaag
      121 tacccggact caaagtgggc taagataatt cgtgctttat atggtgagaa agcgggtcta
      181 gatggtaaca tattacgtgg atctagtgtg tggtgttcca ttgttaaact tttttataaa
      241 gtaaaaagtg gtggtgtcat cccgaataat attcttcggg tcaagattgg taatggtcgt
      301 aacactaggt tttgggtgga caattggaaa agagatggaa ctctcaaaga taaatacaaa
      361 aggatttatc atttgaaaag aaacaaaaac tgcacgatag ccgatcgatt cgtaaacata
      421 gaatggaaat gggagtgggt acgggagcat attagcacaa gaaattcaag tatgttatca
      481 tccctaatga cagatctgta cggtattgct tgcaacgatg ataacgatgc atgggagtgg
      541 agtatttgtg atgatggtta ttataaggtt aatcaaacgc gatcattcat tgataatagt
      601 tatcttcatg atgccaaaat aaacactaga tggtgcaagc ttatcccacg aaaggtaaat
      661 atttttgctt ggagggttat gttaaatcga ttaccaacac atttgaattt atcgacaatg
      721 ggcatggtat tagatcatct gagctgtgtt ttatgcggtt gccattcgga atcgattagt
      781 cacgttctgt tcgagtgtcc tatcgcacaa gaactgtga
//
LOCUS       XM_071831541            1008 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841317), mRNA.
ACCESSION   XM_071831541
VERSION     XM_071831541.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1008
                     /gene="LOC139841317"
                     /note="uncharacterized LOC139841317; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841317"
     CDS             1..1008
                     /gene="LOC139841317"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687642.1"
                     /db_xref="GeneID:139841317"
                     /translation="MKLNPLKCSFGEEEGKFLGHIITECGIHANPKKIEAIENMPSPR
                     NKKEVQSLTERSLPFFGTLKNCLKKTDLKWTEEAEVAFQEMKKLLKELPTMTAPIAGE
                     TLILYLAASNEAITSEQMHVYFVSKALTGSELNYPAIEKLVLYKPKNFGRMAKWAIEL
                     GEHEIRFSPRSAVKGQFLADYLAETAGDIEVSYESKEIPPPPEQLWEMHTDGACGPEA
                     EYEALLSGMRVAKYLEVKELSVYVDSQLVANQFNGIFEAHDESMQKYLKLVQELAVDF
                     DLFRITQVSRTLNKKADALSKLEALTFSHFKKEIWVEEVKVKSIKEDSVSAAVEEEEQ
                     S"
     misc_feature    <1..66
                     /gene="LOC139841317"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    220..>432
                     /gene="LOC139841317"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    616..894
                     /gene="LOC139841317"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgaagctca acccgttgaa gtgcagtttt ggagaggaag aaggaaagtt tcttggtcat
       61 ataataactg agtgcgggat acatgcaaac ccaaagaaaa tagaggcaat cgagaatatg
      121 ccgtcaccaa gaaataaaaa agaagtacaa agtttaacgg agcgatcact cccctttttc
      181 gggacattga agaattgctt aaagaaaacg gatttaaagt ggacggagga agcagaagtg
      241 gcgtttcaag aaatgaaaaa gttgctgaaa gagctgccaa caatgactgc gccgattgcg
      301 ggagaaacgt tgatactata cttagcagca tcgaatgaag caataacttc agaacaaatg
      361 catgtatatt ttgttagcaa agctttaaca ggaagtgaat taaactatcc tgcaatcgaa
      421 aaactggtgc tatataaacc aaaaaatttt ggtcgcatgg ccaaatgggc tattgaattg
      481 ggagagcacg aaataagatt ctcaccacga agtgcggtaa aagggcaatt cctagcagat
      541 tatctggctg aaacagctgg agatatcgaa gtctcatatg aatcaaaaga aataccacct
      601 ccgcccgaac agctgtggga aatgcacaca gatggggctt gtggcccaga agctgaatat
      661 gaagcattgt tatctgggat gcgggtagca aaatatctgg aggttaaaga actgtcagta
      721 tatgttgatt cgcagttagt tgcaaaccaa tttaacggaa tattcgaagc acacgatgaa
      781 tcaatgcaaa aatacttaaa gcttgtgcaa gagctagcag ttgacttcga tttattccgg
      841 ataactcagg tttcgaggac actgaataaa aaggcggatg cgctaagtaa gttagaagca
      901 ttaacattca gtcattttaa gaaagaaatt tgggttgagg aagttaaagt aaaatctatt
      961 aaagaagaca gtgtttcggc tgcagttgaa gaagaggagc agagttga
//
LOCUS       XM_071831542             663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841318), mRNA.
ACCESSION   XM_071831542
VERSION     XM_071831542.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..663
                     /gene="LOC139841318"
                     /note="uncharacterized LOC139841318; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841318"
     CDS             1..663
                     /gene="LOC139841318"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687643.1"
                     /db_xref="GeneID:139841318"
                     /translation="MMLYPKNRKTSLKAVFLPEASPLTISEYFVHGLINTLYIDGRTL
                     DEIKEFPQMMQEAITRYKDNFAKDREIFLRMHSSYPIFNECLYLLVPAITIAQLGVSN
                     GNYPTRDEAPQITPVIDHLVTTLAGVYFSSSRIGNGQEQQKNIRINYVNKNILIYSNT
                     SEKIYEKGRSLVKTFEEPFETFTGLLASLPEEMKKLLCNQFSHAPRYSCEHCSDNSTT
                     MG"
ORIGIN      
        1 atgatgttat atcctaaaaa taggaaaact agccttaaag cagtttttct accagaagca
       61 tcaccattaa caatatcaga atactttgtc cacgggctaa tcaatactct ctatatcgat
      121 ggtcggacac ttgatgaaat taaagaattt cctcaaatga tgcaagaagc aattacccga
      181 tacaaagata acttcgcaaa agacagagaa atatttctca gaatgcattc aagctaccca
      241 atattcaacg agtgtctata cctactcgtt ccagcaatca ctatagcaca actcggagta
      301 agcaatggta attatccaac aagagatgaa gcacctcaaa taacacccgt tattgaccac
      361 ctggtaacaa ctttagcagg agtttacttt agctcctcga gaataggaaa tggccaagaa
      421 caacagaaaa acataagaat taattacgtt aacaaaaata tactaattta ttcaaacacc
      481 agcgagaaga tatacgaaaa aggtcgtagt ctagtcaaaa cctttgaaga accttttgaa
      541 acatttacag ggctactagc ttcacttcca gaagaaatga aaaagttact atgtaatcaa
      601 ttcagtcatg caccaagata cagttgcgaa cactgttcag acaacagtac aaccatgggt
      661 tag
//
LOCUS       XM_071831543            1062 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841319), mRNA.
ACCESSION   XM_071831543
VERSION     XM_071831543.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1062
                     /gene="LOC139841319"
                     /note="uncharacterized LOC139841319; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841319"
     CDS             1..1062
                     /gene="LOC139841319"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687644.1"
                     /db_xref="GeneID:139841319"
                     /translation="MSSSSSSSGDSFTKYTINVIENLSDEEEVNSRRYIRRNHYEAHD
                     RLMDDYFNEDCKYSADNFKRRFRMRRRVFLRIMNDILSYSANPLPYYFRWFHRRQDSR
                     GKWSISPHLKMTAALRQLAYGYTPDALDEYLQMYERVARESLHNFCRCIIDLYANVYL
                     REPTLHNIHHLYEGHERIHGFPGMLGSIDCMHWAWAKCPVAWRGQYMRGDHSHPTIML
                     EAVASYDNWIWHAYFGVAGSNNDINVLNTSDLFNSMLNEEMPDVPYEINGVHYSRGYY
                     LADGIYPTWAAFVKGFSSAVDEKRTYFTKKQASARKDVERTFGILQGRWHILQQPARA
                     YEVNIMRQHHYRRQWIQPC"
     misc_feature    475..1023
                     /gene="LOC139841319"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcgtctt cttcgagttc ttccggcgac tcgttcacga agtacacaat aaacgtaatt
       61 gaaaatttat ccgatgaaga agaagttaac tcacgtcgtt atatacgtcg aaatcattat
      121 gaagcacatg atcgtttgat ggacgattat tttaacgagg attgcaaata ttcggctgat
      181 aatttcaaaa gaagatttcg aatgcggcga cgtgtttttc ttaggattat gaatgatatt
      241 ctaagctact cagcaaatcc attgccgtat tattttagat ggtttcatcg aagacaagat
      301 tcacgtggta agtggagtat tagcccacat ttgaagatga cagccgcgct acgtcagcta
      361 gcatacggtt atacaccgga tgcgttggat gagtatcttc aaatgtacga acgagttgct
      421 cgggaatctc tacacaactt ttgtaggtgt atcattgatt tgtatgctaa cgtgtaccta
      481 agagagccta ctttgcacaa cattcatcat ttgtatgaag gtcatgaaag gattcatggt
      541 tttccgggca tgttgggtag tatagattgt atgcactggg catgggcaaa atgtccagtt
      601 gcgtggagag gacagtatat gcgaggtgat cacagtcacc caactattat gcttgaagcg
      661 gtcgcctcgt atgataattg gatttggcat gcgtattttg gtgtagcggg ttcaaacaac
      721 gatattaatg tgctaaacac tagtgatttg ttcaactcaa tgcttaatga ggaaatgccg
      781 gacgttcctt atgaaataaa cggggttcat tatagcaggg ggtattattt agctgacggt
      841 atttacccaa cttgggcggc ctttgttaag ggattttcaa gtgccgttga cgaaaaacgt
      901 acttacttta ctaagaaaca agcgagtgct cgcaaagatg ttgaaagaac gtttgggatc
      961 cttcaaggcc gttggcatat tcttcagcaa cccgcacgag cttacgaggt gaatataatg
     1021 agacaacatc attatcgaag acaatggata caaccttgct ga
//
LOCUS       XM_071831544            2808 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841320), mRNA.
ACCESSION   XM_071831544
VERSION     XM_071831544.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2808
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2808
                     /gene="LOC139841320"
                     /note="uncharacterized LOC139841320; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841320"
     CDS             1..2808
                     /gene="LOC139841320"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687645.1"
                     /db_xref="GeneID:139841320"
                     /translation="MLPVGNKLPLNLYETKAILKELSLPKKRYDACKNHCMLFYKQED
                     LSLTHYRYCNEPRYKFNKVPYLVLTYMPIGERLKRLYMSEKTTKEMTWHFDHNTKEDE
                     IRNVRLGLCTDGFSPNNSNSNPYSLWPVFLTIYNLPPWMCAKDSYVQLSLVIPGRKSP
                     GQNLDVFLQPLIDELKELWDDGIEVYDAYRKQNFTMRAILLWTVSDFPAYAMLSGWST
                     HGRLACPYCMGDTNAFRLNEGGKLCWFDCHRILLPERHPFRRDKKGFKKGISQLSTTI
                     PPELTGDEILSQVSNFPTVYEGEPYSAKNPKDSKFGKTHNWVKKSIFWEFPYWHSLLI
                     RHNLDVMHIEKNVFENLFNTVMDTPKTKDNIKARKDINLYCDRASLHLFKNNNNKVMK
                     PKAAYTLTKPQLKKVCEWLKKVKFPDGYASNIGGCVNVQECTFYSFKSHECHVFMQRL
                     LPIALKGMLPDAIWDAITELCTFFRVICSKVLHTEDLQKLEKSIVVTICKLEKFFPPG
                     FFDSMEHLIIHLTREAIRGGPVQYRCMYPYERKLGILKRTVRNKARVEGSIVETYIAN
                     ELSTYFSLHLNSKIPTRLNREPRNFATENSTSTNDSRLSIFKVPSRRLFEKGGIKRIL
                     TKAEQHKIHTYILLNTEEVHEYIWKFDEWIIEEEPNLEAAECDKRRERFCTMDITSPT
                     CFNEHLRDLAFSPLNEVKFHNGYFINGYKFHTLKQSSGRVTQNCGVCVKGACYDNQES
                     DYYGLIEEIIEVEYHNSLSHCVVVLFKCHWFDPVRGVRVDHKHKLVDVKTKSRGCVDD
                     PFILASQVEQVYYAPYPSMTRDLKDWSAVVKVKPRAIYQLEEHVSEVADDDEDDNGNN
                     DDIFYQENERIICPTSTNEDFGPIILEQGEAEEVPTGDLVNITNVETNEEEEDLYDDS
                     DSDEDIDDEDIDIYSSDHSAD"
     misc_feature    268..867
                     /gene="LOC139841320"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1429..1767
                     /gene="LOC139841320"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2248..2481
                     /gene="LOC139841320"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgttacctg ttggtaataa gctgccgttg aacttgtatg agaccaaagc gatcttgaag
       61 gaacttagtc ttccaaaaaa gaggtatgat gcttgcaaaa accattgcat gttattctat
      121 aaacaagaag atttgtcatt aacccactac cgatactgca atgaacctcg ttataaattc
      181 aataaggtcc cttatttggt attaacgtac atgccaattg gagagaggct taagaggttg
      241 tatatgtcag aaaagacgac caaagagatg acgtggcact tcgatcacaa tacaaaagag
      301 gatgagatac gaaatgttcg gcttgggttg tgcactgatg gttttagccc taataactca
      361 aattctaatc cttattcgtt atggcccgtg ttcctcacaa tttataactt acctccttgg
      421 atgtgcgcga aagactcgta cgttcagtta tctttggtta ttcctggaag aaagagtccc
      481 ggccaaaact tagatgtgtt tcttcaaccg ttaatagatg agttgaaaga gttatgggat
      541 gatggtattg aagtgtatga tgcttatcgt aaacaaaatt ttacgatgag agctatactt
      601 ttgtggacag ttagtgactt ccccgcttat gcaatgcttt cgggttggag cacacatggt
      661 agattggcct gcccttattg catgggtgac acaaatgcat ttcggttaaa tgagggaggg
      721 aagctatgtt ggtttgactg ccatcgaata ctattaccag aaagacaccc atttcggcgt
      781 gacaagaaag gattcaagaa aggaatttcc caattgtcaa ctactatacc accagaatta
      841 accggtgatg aaattttgag ccaagtgtca aactttccaa ccgtttatga aggtgaacca
      901 tactcagcaa agaatccaaa agactcaaaa tttggtaaaa cccataattg ggtaaagaaa
      961 agtatatttt gggagtttcc atattggcat tctttgttaa tccgacacaa ccttgatgta
     1021 atgcacatcg agaagaatgt ttttgaaaat ctgtttaaca ctgtcatgga cactccgaaa
     1081 acaaaggaca atatcaaggc gaggaaggat attaatttgt attgtgatcg ggcgagcttg
     1141 catcttttta aaaacaacaa taataaagtt atgaaaccaa aggcagcata cactctgacc
     1201 aaaccacaat taaagaaagt ttgtgaatgg ttaaagaagg tgaaatttcc tgatggctat
     1261 gcttcaaata ttgggggatg tgtaaatgtt caagagtgta ccttttatag tttcaagagt
     1321 cacgagtgtc acgtatttat gcaacggttg ttgcctattg ctttaaaagg gatgctgcct
     1381 gatgcaatat gggacgcaat cactgagttg tgcacattct ttcgtgtaat atgctcaaag
     1441 gtgttgcata ctgaggactt gcaaaaactt gaaaaaagta tcgttgtaac aatttgcaag
     1501 ttagaaaaat tctttccacc tggattcttc gactcaatgg aacaccttat tatccattta
     1561 acacgtgaag cgattcgtgg tggcccagtt caatatagat gcatgtatcc atatgagagg
     1621 aaattaggca tattgaaaag aacagttaga aataaggcaa gggttgaggg gtctattgtt
     1681 gaaacatata tcgcaaatga actttctaca tatttctcct tgcatcttaa ctcaaaaata
     1741 ccaactcgat tgaatcgcga gcctcgaaat tttgctacgg aaaattctac ttcaacgaac
     1801 gactctcgat taagcatatt taaagttccg tctcgaagat tattcgagaa gggtggaata
     1861 aagagaatat tgactaaagc tgagcaacat aagattcata cttatatctt gcttaacaca
     1921 gaagaggttc atgaatacat atggaagttt gatgagtgga ttattgaaga agaaccaaat
     1981 cttgaagctg cagagtgtga taaaagaaga gagagatttt gcacaatgga tataacctcc
     2041 ccaacatgct ttaatgaaca tttgagagat ttagcattca gtccattaaa tgaagttaaa
     2101 ttccataatg gatacttcat caatggttat aagtttcata ctctaaaaca atctagtggg
     2161 cgggttacac aaaattgcgg tgtgtgcgtt aaaggtgctt gttatgacaa ccaagaaagc
     2221 gactattatg ggttgataga agagatcata gaagttgaat accataatag tttatcacat
     2281 tgtgtggttg tgctattcaa atgccactgg ttcgatcccg ttcgaggggt aagggttgac
     2341 cataagcata agctagttga tgtcaaaacc aagtctcggg gatgtgttga tgacccattt
     2401 atcttagcat cacaggtaga acaagtgtat tatgcaccat atccttcaat gacaagagat
     2461 ttgaaagatt ggtcagccgt tgttaaagta aaacctaggg ctatttatca actggaagaa
     2521 catgttagtg aagtagctga tgatgatgaa gatgataatg gaaacaatga tgatattttc
     2581 taccaagaga atgagaggat aatatgtcca acaagtacta atgaggactt tggaccgatt
     2641 attctcgaac aaggagaagc agaagaagtt ccaacgggtg atcttgtgaa cattacaaat
     2701 gttgaaacta atgaggagga agaagattta tatgatgatt cagattcaga tgaggatatc
     2761 gatgacgaag atatagatat ttactcttct gatcattctg ctgattga
//
LOCUS       XM_071831545             918 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841321), mRNA.
ACCESSION   XM_071831545
VERSION     XM_071831545.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..918
                     /gene="LOC139841321"
                     /note="uncharacterized LOC139841321; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139841321"
     CDS             1..918
                     /gene="LOC139841321"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687646.1"
                     /db_xref="GeneID:139841321"
                     /translation="MTATLRQLAYCYTPDALDEYLQMSERVGRESLHNFYKYIIDLYA
                     NVYLGEPTLHNIQRLYEGHERIHGFPGMLGSIDCMHWVWAKCPVAWRGQYMRGDHSHL
                     IIMLKAVASYDNWIWHVYFGVAGLNNDINVLNTSDLFNSMLNEEMLDVPYHINGVQYR
                     RGYYLADGIYPTWTAFVKGFSSAVDEKRSYFTKKQASARKDVERAFGILQGRWHILQQ
                     PARSYEVNIMRQLIYTCIVIRNINIEDNGYNLAENDLVVEPVQHIQRTWIDRCDARAR
                     RTRELRDREAHEGLRSDLVEHLWDLPDDL"
     misc_feature    139..741
                     /gene="LOC139841321"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgacagcca cactacgtca gctagcatac tgttatacac cggatgcttt ggatgagtat
       61 ctgcaaatgt ctgaacgagt tggccgggaa tctctacaca acttttataa gtatatcatt
      121 gatttgtatg caaacgtcta cctaggagag cctacgttgc acaacattca acgtttgtat
      181 gaaggtcatg aaaggattca tggttttccg ggcatgttgg gtagtataga ttgtatgcac
      241 tgggtatggg caaaatgtcc agttgcgtgg agaggacaat atatgcgagg cgatcacagt
      301 cacttaatta ttatgcttaa agccgtcgcc tcgtatgata attggatttg gcatgtgtat
      361 tttggtgtgg cgggtttaaa caacgatata aatgtgctaa acactagtga tttgttcaac
      421 tcaatgctta acgaggaaat gctcgacgtc ccttatcata taaacggtgt tcagtacaga
      481 agagggtact atttagctga cggtatttac ccaacatgga cggcttttgt taagggattt
      541 tcaagtgccg ttgacgaaaa acgttcttac tttacaaaga aacaagcgag cgctcgcaaa
      601 gatgttgaaa gagcttttgg gatcctacaa ggtcgttggc atattcttca acaaccagcg
      661 cggtcttacg aggtgaatat aatgagacaa ctaatttaca cgtgcatcgt aatacgcaac
      721 atcaatatcg aagacaatgg ttacaacctt gctgagaatg atttggtagt tgagcccgtt
      781 caacatatac aacgtacttg gatcgatagg tgcgatgctc gtgcaagaag aacaagggag
      841 ttacgtgata gagaagcgca tgaaggctta cgatctgatt tggttgaaca tttgtgggat
      901 cttccagacg acttatga
//
LOCUS       XM_071831546             381 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ras-related protein
            RABA5c-like (LOC139841323), mRNA.
ACCESSION   XM_071831546
VERSION     XM_071831546.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..381
                     /gene="LOC139841323"
                     /note="ras-related protein RABA5c-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139841323"
     CDS             1..381
                     /gene="LOC139841323"
                     /codon_start=1
                     /product="ras-related protein RABA5c-like"
                     /protein_id="XP_071687647.1"
                     /db_xref="GeneID:139841323"
                     /translation="MGQAAGENGEEYLFKIVVIGDSAVAHCDTTMARMLVGNKSDLEH
                     IRAVSVEEGRSLAEEDKLFFIETSALDSTNVTMAFEVVIRAIYENIKRKVLISDDSSK
                     SEVSLNGVSLVRDENTKQSSCCST"
     misc_feature    <76..261
                     /gene="LOC139841323"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    112..123
                     /gene="LOC139841323"
                     /note="G4 box; other site"
                     /db_xref="CDD:206660"
     misc_feature    202..210
                     /gene="LOC139841323"
                     /note="G5 box; other site"
                     /db_xref="CDD:206660"
ORIGIN      
        1 atgggacaag cagcaggtga aaatggagaa gaatacttgt tcaaaatagt agtgattggt
       61 gattcagcag ttgctcactg cgatactact atggcaagaa tgttagtagg gaacaagagt
      121 gatctggagc atattagggc tgtgagcgtc gaagaaggca gaagtcttgc tgaagaagac
      181 aaacttttct ttatagaaac atctgcactc gattcaacaa atgttacaat ggcttttgag
      241 gttgttattc gtgcgattta tgaaaatatc aaacgaaaag tcttaatttc ggatgattcg
      301 tccaaatctg aagtgtcctt aaatggtgta agcctagtta gagacgaaaa cacaaagcaa
      361 agttcttgtt gttcaacatg a
//
LOCUS       XR_011757405            1259 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841324), transcript variant X1, ncRNA.
ACCESSION   XR_011757405
VERSION     XR_011757405.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1259
                     /gene="LOC139841324"
                     /note="uncharacterized LOC139841324; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841324"
     ncRNA           1..1259
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841324"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139841324"
ORIGIN      
        1 cgcttgaaag aaggatacag cagcctttta tcttggaaaa gtaattttat gcacgctata
       61 gatttgatgc tctacagtca aaaatcacat atttcaaata tctattgttt cttcatcttc
      121 ttctatcatt ttcaaattct cttaaatctt tgattcaatt gaaggcgctg gattaacaaa
      181 tcttttacaa atctgattac gatacgagca atcagaaaac ttattttgat ttcttgccct
      241 aattccgata aacacacgtt ctatgaggta ttgaaattga ttcatgctta tggaaatggt
      301 tcaaattagg gttcataatc aattgaattg gttcataaaa tacaaattag ggttcataat
      361 caattgaatt ggtaccagaa aattattgca gcgtctgcca tggtgttcaa tgtgcagata
      421 agaagatgag taatgactaa gtgatgaaga atttagagta ggtaaatatt taacagaagt
      481 ggataacaga attggagtga tgaaccggtc ttccttatca ggtagctttt gtttttcata
      541 tttttgctga tttataaatt ttattcatgc ttctattttc gtacattgtt tgtggttcac
      601 aatttttttc agtgattctt aaatccaaaa tattcttcaa aattatgttt gcaaggtata
      661 cgaggagaga ggctaaaaga aagagttatg ttgatgcatt gttgaactac actccttaaa
      721 gaatggtgaa attttaagca gttacataac acttcagcta aagaacttaa tcggtttttg
      781 ttacacttgg gctgttgtaa tatctttgta gatttggaga ttgaggacca atgccaaacg
      841 tgcaggcact tcaacaaagg ctgtttgtag aggcgttgtt gacacataga acaaatatac
      901 ggttataaaa aagttatcga tgtgcggcaa tttggaatgc taaacatatt tcatccaatc
      961 ttttgatcaa aattgagttc ctccaggaaa gcaaatgttt ggtttaggga tgggtaatgg
     1021 caaggaaatg gtggtgctgg tacaatttta acacttacaa gatttgtatg tccttatggt
     1081 gacagaagtg tttacttaag tatttttctt ttacagggta agatttttat tatcatgtca
     1141 tttttgactt atttagttgc attaaaaagt gtttatgata atgtatatat aaatataagt
     1201 gaatagactt aatggttttt ttctacttga tgatatatct gtatgtgcat tttgtaaag
//
LOCUS       XR_011757406            1238 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841324), transcript variant X2, ncRNA.
ACCESSION   XR_011757406
VERSION     XR_011757406.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1238
                     /gene="LOC139841324"
                     /note="uncharacterized LOC139841324; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841324"
     ncRNA           1..1238
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841324"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139841324"
ORIGIN      
        1 cgcttgaaag aaggatacag cagcctttta tcttggaaaa gtaattttat gcacgctata
       61 gatttgatgc tctacagtca aaaatcacat atttcaaata tctattgttt cttcatcttc
      121 ttctatcatt ttcaaattct cttaaatctt tgattcaatt gaaggcgctg gattaacaaa
      181 tcttttacaa atctgattac gatacgagca atcagaaaac ttattttgat ttcttgccct
      241 aattccgata aacacacgtt ctatgaggta ttgaaattga ttcatgctta tggaaatggt
      301 tcaaattagg gttcataatc aattgaattg gttcataaaa tacaaattag ggttcataat
      361 caattgaatt ggtaccagaa aattattgca gcgtctgcca tggtgttcaa tgtgcagata
      421 agaagatgag taatgactaa gtgatgaaga atttagagta ggtaaatatt taacagaagt
      481 ggataacaga attggagtga tgaaccggtc ttccttatca ggtagctttt gtttttcata
      541 tttttgctga tttataaatt ttattcatgc ttctattttc gtacattgtt tgtggttcac
      601 aatttttttc agtgattctt aaatccaaaa tattcttcaa aattatgttt gcaaggtata
      661 cgaggagaga ggctaaaaga aagagttatg ttgatgcatt gttgaactac actccttaaa
      721 gaatggtgaa attttaagca gttacataac acttcagcta aagaacttaa tcggtttttg
      781 ttacacttgg gctgttgtaa tatctttgta gatttggaga ttgaggacca atgccaaacg
      841 tgcaggcact tcaacaaagg ctgtttgtag aggcgttgtt gacacataga acaaatatac
      901 ggttataaaa aagttatcga tgtgcggcaa tttggaatgc taaacatatt tcatccaatc
      961 ttttgatcaa aattgagttc ctccagggat gggtaatggc aaggaaatgg tggtgctggt
     1021 acaattttaa cacttacaag atttgtatgt ccttatggtg acagaagtgt ttacttaagt
     1081 atttttcttt tacagggtaa gatttttatt atcatgtcat ttttgactta tttagttgca
     1141 ttaaaaagtg tttatgataa tgtatatata aatataagtg aatagactta atggtttttt
     1201 tctacttgat gatatatctg tatgtgcatt ttgtaaag
//
LOCUS       XR_011757407            1122 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841324), transcript variant X3, ncRNA.
ACCESSION   XR_011757407
VERSION     XR_011757407.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1122
                     /gene="LOC139841324"
                     /note="uncharacterized LOC139841324; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841324"
     ncRNA           1..1122
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841324"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139841324"
ORIGIN      
        1 ttgaaagaag gatacagcag ccttttatct tggaaaagta attttatgca cgctatagat
       61 ttgatgctct acagtcaaaa atcacatatt tcaaatatct attgtttctt catcttcttc
      121 tatcattttc aaattctctt aaatctttga ttcaattgaa ggcgctggat taacaaatct
      181 tttacaaatc tgattacgat acgagcaatc agaaaactta ttttgatttc ttgccctaat
      241 tccgataaac acacgttcta tgaggtattg aaattgattc atgcttatgg aaatggttca
      301 aattagggtt cataatcaat tgaattggtt cataaaatac aaattagggt tcataatcaa
      361 ttgaattggt accagaaaat tattgcagcg tctgccatgg tgttcaatgt gcagataaga
      421 agatgagtaa tgactaagtg atgaagaatt tagagtaggt aaatatttaa cagaagtgga
      481 taacagaatt ggagtgatga accggtcttc cttatcaggt atacgaggag agaggctaaa
      541 agaaagagtt atgttgatgc attgttgaac tacactcctt aaagaatggt gaaattttaa
      601 gcagttacat aacacttcag ctaaagaact taatcggttt ttgttacact tgggctgttg
      661 taatatcttt gtagatttgg agattgagga ccaatgccaa acgtgcaggc acttcaacaa
      721 aggctgtttg tagaggcgtt gttgacacat agaacaaata tacggttata aaaaagttat
      781 cgatgtgcgg caatttggaa tgctaaacat atttcatcca atcttttgat caaaattgag
      841 ttcctccagg aaagcaaatg tttggtttag ggatgggtaa tggcaaggaa atggtggtgc
      901 tggtacaatt ttaacactta caagatttgt atgtccttat ggtgacagaa gtgtttactt
      961 aagtattttt cttttacagg gtaagatttt tattatcatg tcatttttga cttatttagt
     1021 tgcattaaaa agtgtttatg ataatgtata tataaatata agtgaataga cttaatggtt
     1081 tttttctact tgatgatata tctgtatgtg cattttgtaa ag
//
LOCUS       XM_071831548             678 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841325), mRNA.
ACCESSION   XM_071831548
VERSION     XM_071831548.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..678
                     /gene="LOC139841325"
                     /note="uncharacterized LOC139841325; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841325"
     CDS             1..678
                     /gene="LOC139841325"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687649.1"
                     /db_xref="GeneID:139841325"
                     /translation="MDHDIQACSFKENVCWNCHKSGHRSVDCPSARKMSSGVGSGART
                     SSVGGSPASSTGQKRKNPPPPEARAFYISVDTATETDDVITGMFLINSSPARVLFDCG
                     ANRSFMSVTLCDKLKFPINVLSEPIRIEVGDGMDWLSRHKASIKCDKKIIYFPLADET
                     RVVARGERGRFNCPLISMMKAKKSLATGCDSFLAYVIDAKKEKKFVSDIPIVFEFPEV
                     FPDELSG"
     misc_feature    <43..>114
                     /gene="LOC139841325"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    199..477
                     /gene="LOC139841325"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(298..300,304..306,310..312,385..393)
                     /gene="LOC139841325"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    298..306
                     /gene="LOC139841325"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    298..300
                     /gene="LOC139841325"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggatcatg atattcaggc ttgctcattc aaagaaaatg tttgctggaa ttgccataaa
       61 tcagggcaca gatcagttga ttgtccatct gcgagaaaga tgagttctgg ggtagggtca
      121 ggagcaagga catcgtcagt cggaggatcc cctgcttctt caactggaca gaagcgaaag
      181 aatcctccac cacctgaagc aagagccttt tacatatcgg ttgatacagc tactgaaact
      241 gacgatgtga ttaccggtat gtttctaata aattcttcgc cggctcgtgt gttatttgat
      301 tgtggagcga atcgctcttt tatgtctgtt acattatgtg ataagttgaa atttcctatc
      361 aacgtattat ctgaacctat aagaatagaa gtgggtgatg gtatggattg gttaagccgc
      421 cataaagcaa gtataaaatg tgataagaaa ataatttatt ttcctttggc cgatgagaca
      481 cgtgttgtgg cccgaggtga acggggcagg tttaattgtc cgttaatttc aatgatgaaa
      541 gctaagaaat cgttagccac aggatgtgat tcgtttctag catatgtaat cgatgcaaag
      601 aaagagaaga aatttgtgtc cgatatcccg atagtgttcg aattcccaga agtatttcct
      661 gatgaattat cgggctaa
//
LOCUS       XM_071831549             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00860-like (LOC139841326), mRNA.
ACCESSION   XM_071831549
VERSION     XM_071831549.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139841326"
                     /note="uncharacterized mitochondrial protein
                     AtMg00860-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841326"
     CDS             1..555
                     /gene="LOC139841326"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00860-like"
                     /protein_id="XP_071687650.1"
                     /db_xref="GeneID:139841326"
                     /translation="MSQIQELLDRGFIRPSSSPWGALVFFMKKKDGTLHMCIAYRELN
                     KRTVKNKSAVFGSRYLPRGIKVDPSKIEAIMNWNSPKTLTEIKSLLGLAGYYRRFIKD
                     FSKIAGPLTKLTRKDVTFRWSDEQENAFQTLKRLFCQAPVLALLEGTEDFIVYCDASF
                     SRIGLCVNAVRESYCLCLKTVENS"
     misc_feature    31..>153
                     /gene="LOC139841326"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    364..>492
                     /gene="LOC139841326"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atgtcacaaa ttcaggagtt gctagatcgt gggtttattc gaccaagttc ttcgccatgg
       61 ggtgctctag tgtttttcat gaagaagaaa gacggaactc tccatatgtg cattgcttac
      121 cgagaactaa ataaaagaac agtgaagaac aaaagtgcag tttttgggtc acgttatctg
      181 ccaagaggta tcaaagtcga tccatctaaa atagaagcga taatgaattg gaattcaccg
      241 aagactctga cagagattaa gagtcttctg ggtttagccg gttactaccg aaggtttatt
      301 aaagatttct caaagatagc gggtccattg accaagttaa cccggaaaga tgtaactttt
      361 cgatggagcg atgaacaaga aaatgccttc cagacattga aacggttgtt ttgtcaagct
      421 ccagttttag cgttacttga gggtacagaa gattttattg tgtattgtga tgcgtcattt
      481 agccggattg ggttgtgtgt taatgcagtg agagaaagtt attgcctatg cctcaagaca
      541 gttgaaaact catga
//
LOCUS       XM_071831550            1138 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides enoyl-CoA delta isomerase 2,
            peroxisomal-like (LOC139841327), mRNA.
ACCESSION   XM_071831550
VERSION     XM_071831550.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1138
                     /gene="LOC139841327"
                     /note="enoyl-CoA delta isomerase 2, peroxisomal-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 13 Proteins"
                     /db_xref="GeneID:139841327"
     CDS             178..903
                     /gene="LOC139841327"
                     /codon_start=1
                     /product="enoyl-CoA delta isomerase 2, peroxisomal-like"
                     /protein_id="XP_071687651.1"
                     /db_xref="GeneID:139841327"
                     /translation="MCTLEKRGNIFFLTLTGADDHRLNPTLISSIRSSLSKVKSQSTR
                     GSVLITVAEGKFFSNGLDIAWAKSSSGGSPSEAVNLLRHMINLFKGVVADLISLPMPT
                     IAAVTGHAAAGGMLLAMSHDYVMMKRDRAVLYMSELDLGMTLPEFCIALVRSKASTPE
                     VMRDVLLRGMRVKADDAVAKGLIDSAHDSAEKAVEAAVRMGDELAKRNWDGEVYGEIR
                     KSLNPELINLLGLTSKELVKTRL"
     misc_feature    178..873
                     /gene="LOC139841327"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; Region:
                     crotonase-like; cl23717"
                     /db_xref="CDD:474030"
     misc_feature    order(238..240,241..243,340..342,352..366,502..504,
                     508..516,583..588,595..597)
                     /gene="LOC139841327"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:119339"
     misc_feature    order(358..360,514..516)
                     /gene="LOC139841327"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     misc_feature    order(454..456,478..480,541..552,589..600,616..618,
                     622..630,634..639,655..660,664..669,673..678,685..687,
                     718..720,727..729,787..789,796..798)
                     /gene="LOC139841327"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:119339"
     polyA_site      1138
                     /gene="LOC139841327"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggatgaattt gtagtttggt gactaataaa tcctagttat agtatgccgt ttatgactaa
       61 taacaaaatt gtgtattata tacttaagca ctactattat atcagcatat atatatatat
      121 attatccaat taaattgaaa ggaatcaaca ccacatatct aaattccgac cggcaacatg
      181 tgcacgctag aaaaacgcgg caacatcttc ttcttaacac taaccggcgc cgatgatcac
      241 cgtctaaatc caactctcat ctcctcaatc cgctcatctc tttccaaagt caaatctcag
      301 tcaactcgcg gcagcgtcct catcaccgtc gccgagggca aattcttctc caacggtttg
      361 gatatcgcct gggctaaatc atcctccggc ggatcccctt cggaagccgt caacctcctc
      421 cgtcacatga taaatctatt caaaggcgtc gtcgcagatc taatttcctt accgatgcca
      481 acgatcgcgg cggttactgg ccacgctgca gcaggcggaa tgttactcgc gatgagtcac
      541 gattacgtca tgatgaagcg tgatcgagct gtcttgtata tgagtgagct tgatttaggg
      601 atgacgttac cggagttttg catagcgtta gtaaggtcaa aggcgtcaac gccggaggtc
      661 atgcgagatg tattgttgcg tggtatgaga gtgaaagcgg atgatgcggt ggctaaaggt
      721 ttgattgatt cggcgcatga tagtgcggag aaggcagttg aggctgctgt acgcatgggt
      781 gatgaattgg ctaaacggaa ttgggacggt gaagtttacg gtgaaatacg gaagtcgtta
      841 aatccagagt taattaacct actcgggtta accagtaagg agcttgtgaa aactaggctt
      901 tagaaattat gaaggggtga atttgttgat ttggaaattt gtaaggtcgt gtttgttgtt
      961 taggtgtact tcttggggtg tagttgtatg gttattctaa tacgggatag ggttgttcgt
     1021 taaacagttt caacttccaa cctaaaattc atacaaattc aaactatagt aaaatatact
     1081 ccgtaataaa atataatgaa cgaatataaa tataatgaat tgtagtttat gttttatt
//
LOCUS       XM_071831551            1828 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable glucan
            endo-1,3-beta-glucosidase A6 (LOC139841329), mRNA.
ACCESSION   XM_071831551
VERSION     XM_071831551.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1828
                     /gene="LOC139841329"
                     /note="probable glucan endo-1,3-beta-glucosidase A6;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 Proteins"
                     /db_xref="GeneID:139841329"
     CDS             1..1680
                     /gene="LOC139841329"
                     /codon_start=1
                     /product="probable glucan endo-1,3-beta-glucosidase A6"
                     /protein_id="XP_071687652.1"
                     /db_xref="GeneID:139841329"
                     /translation="MVVLSCRWVYESVVRNDLGLIANDLVTSRAEVLSQSDPIAALGG
                     PIGIAQEVAPGSGTTPCVAQVSGDSNVHISSSPIVYNWDFRTGEVVMFWQVGGFIHVS
                     LVVVFVALLVSCSGAAIAAKPGVNYGQLGNNLPKPHKSAELIKTLKAGRVKIYDANPK
                     ILKSLQNTSIQVSIMVPNEIITSISTNQTIADQWVRSNVVKFYPKTKIRYILVGNEIL
                     SQPDNVTWYNLVPAMGRIRKSLVKYKLKKIKVGTPLAMDCLETSFPPSSGKFRSSVTG
                     SVIGPLLRFINRTKSFFFIDVYTYFAWIADPVNVKLGYALLEPNVTSYTDPVSGLVYN
                     NLLEQMLDALYFAMKRAGYPETRIFIAETGWPNGGDIDQIGGNIYNAAVYNRNVVKWL
                     TRKPAPGTPLKPGIVFPSFIFALYNENLKPGPGTERHFGLLYPNGTSIYEIDLSGKTL
                     EYPMKLPEPTNNVPYKGKIWCMVARGANTTALGGALSYACGQGNGTCDSIRPGGKCFK
                     PESLVWHANYAFSSYWAQFRKFGGSCYFNGLAVQTAKDPSFGSCKFPSVTL"
     misc_feature    370..1332
                     /gene="LOC139841329"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     Region: Glycosyl hydrolases; cl23725"
                     /db_xref="CDD:474034"
     misc_feature    1408..1662
                     /gene="LOC139841329"
                     /note="Possibly involved in carbohydrate binding; Region:
                     X8; smart00768"
                     /db_xref="CDD:197867"
ORIGIN      
        1 atggtggtgt tgagttgtcg atgggtttat gagagtgtcg ttcgcaatga tcttggtttg
       61 attgctaacg atttggtaac cagtcgagct gaggttttga gtcaatctga ccctattgct
      121 gcgttggggg gccctattgg cattgctcaa gaagttgctc cgggttcagg cacaactcca
      181 tgtgttgctc aagtatcggg agattctaat gtgcatattt cttcctcgcc tattgtttac
      241 aactgggatt tcagaacggg tgaagtcgtg atgttttggc aagtcggggg ctttattcat
      301 gtttcacttg ttgtggtgtt tgtagctctc ctagtttcat gttcaggtgc tgctatagca
      361 gccaagccgg gagtaaacta cgggcaactc ggaaacaatc ttccaaaacc acataaatcg
      421 gcggagttaa tcaaaaccct aaaagcgggt cgggtcaaaa tctacgacgc taaccctaaa
      481 atcctcaaat ccttacaaaa caccagcatt caagtatcca taatggtccc aaatgaaatc
      541 ataacatcaa tatccaccaa tcaaacaatc gcagaccaat gggtcagatc caacgttgtt
      601 aagttttacc cgaaaaccaa aatccgttac attcttgtcg gtaacgaaat cttatctcaa
      661 cccgacaatg tcacgtggta taacctcgta ccggccatgg gcaggataag gaaatcttta
      721 gttaaatata aattaaaaaa aattaaagtt ggtacacctt tagctatgga ttgtttggaa
      781 acttcgtttc caccctcgag cggaaaattc cgctcaagtg taacgggctc ggttattggc
      841 ccgttactcc ggtttattaa ccggactaaa tcatttttct ttattgatgt ttatacttat
      901 tttgcttgga tagctgaccc ggttaatgtt aaacttggtt acgctctact tgaaccgaat
      961 gttacgtctt acactgaccc ggtatccggt ttggtgtata ataatttgtt agaacaaatg
     1021 cttgatgctt tgtattttgc tatgaaacgg gctggatacc cggaaacccg tatatttatt
     1081 gcggaaacgg gctggcccaa tggaggcgat atcgaccaaa tcggagggaa tatttacaat
     1141 gccgcagtgt acaaccgtaa tgttgttaaa tggttgaccc ggaaacccgc accgggtacg
     1201 ccgttaaagc ccggtattgt atttccgtcg tttattttcg cgttgtataa cgagaactta
     1261 aaaccgggtc cgggtacgga gcggcatttt ggactgttgt acccgaacgg gacaagtatt
     1321 tacgagattg atttatctgg taagacgttg gagtatccga tgaagttgcc ggaaccgact
     1381 aataatgtgc cgtacaaagg gaagatttgg tgtatggtgg cgcgtggagc taatacgacg
     1441 gcgcttggtg gtgctctgtc ttatgcttgt gggcagggga atggtacttg tgactcgatc
     1501 cgacccggtg ggaagtgttt taaaccggag tcgttggttt ggcatgcgaa ttacgcgttt
     1561 agctcttatt gggctcaatt taggaaattt ggtgggtctt gttactttaa tgggcttgca
     1621 gtccaaacag ccaaagatcc aagtttcggt tcgtgcaaat tcccgagtgt tacattatga
     1681 ggattcaagt cggataggaa gaattcgacg ctagtagaat tgattttttg ttgtttaggg
     1741 aatactgaaa aattgaagaa cttgacatca gtaattttgg gcattttggc tattacatat
     1801 atgttcttta tttatatata tgtatcgt
//
LOCUS       XM_071831552            2135 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sodium/calcium exchanger
            NCL-like (LOC139841330), mRNA.
ACCESSION   XM_071831552
VERSION     XM_071831552.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2135
                     /gene="LOC139841330"
                     /note="sodium/calcium exchanger NCL-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841330"
     CDS             1..2112
                     /gene="LOC139841330"
                     /codon_start=1
                     /product="sodium/calcium exchanger NCL-like"
                     /protein_id="XP_071687653.1"
                     /db_xref="GeneID:139841330"
                     /translation="MTSVRFTLIVFTIIIGLQVKGRLIELKTYPTTSMISDGIHDDPD
                     DTNLHLADDSKLFISATLYGDETRCESMYGFLPCANTMQEGVFLMIMYTYLMMLGEEW
                     IHKGSEALFMLMGDKAFGASVFRVLMAMPRIVLVIVSAFMGTESAAQNQVAFGFGMYA
                     GSTVITLTFIWGFRIILSRDTLRGKGSTKKDEHQQHDESTKCLSLTQKLSILNDTGVN
                     IDKGTGDVASIMLLSLIPFATVELVGLTNTPGSILFALVLSGLFVLAYFAHQIGNPLL
                     AARTMAYLRQENLQGRFIDHVQKLAEKKLIDEQGNPDHEAFKNIFIKYDNDKDMCISH
                     TELEHLIDEVFGLNNKTISKEYAKAEILTHFDDDKSQKINVEEFEKGCTKWLQKWKND
                     ASTSASIWKKVEIIAVRNKRAEITHIDKIMPRIMNQLVLTQQQLVKDGKPNREKIEGM
                     FSNYDKDNNNEIQLEELSDFIRGIDFGVELDHNAVLDGIVKEFDHDGNLTIGKQEFID
                     GFVKWIEKAMNHDPSISEPQKAFDKFDKDSWREIDAPMPLEIPKAHILYVIFGVGIMY
                     LISGAFMQSVIQFSNAAHIPFRFTSFVMAPLAMNTRMVITALLNVGVPHATKNASLTF
                     SEMYNGLVMNNLLGLLTLLITVYVKQLSWIYSDEVLSIMIPCAMIGLFAFSRDTYPLW
                     ASISAMFLYPISIYIYYLMAP"
     misc_feature    847..1416
                     /gene="LOC139841330"
                     /note="EF-hand, calcium binding motif, found in the
                     hexa-EF hand proteins family; Region: EFh_HEF; cl23634"
                     /db_xref="CDD:355006"
     misc_feature    937..1029
                     /gene="LOC139841330"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320075"
     misc_feature    1078..1161
                     /gene="LOC139841330"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320075"
     misc_feature    1204..1278
                     /gene="LOC139841330"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320075"
     misc_feature    1330..1530
                     /gene="LOC139841330"
                     /note="EF-hand domain pair; Region: EF-hand_7; pfam13499"
                     /db_xref="CDD:463900"
     misc_feature    1336..1416
                     /gene="LOC139841330"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320075"
ORIGIN      
        1 atgacaagtg ttcgctttac tttgatcgtg tttacgataa ttattggctt gcaggtgaaa
       61 gggaggttga tagaactcaa aacatatcca acaacatcaa tgatctcaga tgggattcat
      121 gatgaccctg atgatactaa tcttcatttg gccgatgatt ctaaattatt tatttctgca
      181 acattatatg gtgatgagac gaggtgcgaa agtatgtacg ggttcttgcc atgtgcgaat
      241 acgatgcaag aaggtgtgtt cttgatgatt atgtatacgt atcttatgat gttgggggaa
      301 gaatggatac ataaaggaag tgaagctttg tttatgttga tgggcgataa ggcatttggt
      361 gctagtgttt ttcgggtgct tatggctatg cctagaatcg tcctagtcat cgtgtctgct
      421 tttatgggta cagaatctgc tgcccaaaat caagtggcat ttgggtttgg catgtatgca
      481 ggatcaaccg taatcactct cacattcata tggggatttc gaataatact tagtagagat
      541 actcttcgcg gaaagggatc aactaaaaaa gatgaacatc aacaacatga tgaatcaaca
      601 aaatgcttaa gccttacaca aaagctctcc attctgaatg atactggagt taatatcgat
      661 aaggggaccg gagatgtagc atctataatg cttctatcac tgattccctt tgccacagtt
      721 gaactagtag gtctaaccaa cactccgggc tcgattttgt ttgcactcgt gctatcaggc
      781 ctgtttgtac ttgcatactt tgctcatcag atagggaatc cattgcttgc tgccagaact
      841 atggcatact tgaggcaaga aaatttacaa gggcgcttta tcgaccatgt acagaagctt
      901 gcagaaaaga aacttattga tgagcaagga aaccctgatc atgaggcctt taaaaatata
      961 tttataaaat atgacaatga taaagacatg tgcatatcac atactgaatt ggaacatttg
     1021 atcgatgagg tattcggatt gaacaataag actatctcaa aggagtatgc gaaagcagag
     1081 attttgacac actttgacga tgacaaaagt caaaagatca atgtggaaga gtttgaaaag
     1141 gggtgcacta agtggctgca aaaatggaag aatgatgcat caacatctgc aagtatttgg
     1201 aaaaaggttg aaataatagc agttagaaac aagcgcgctg agatcacaca tattgataaa
     1261 atcatgccaa gaatcatgaa tcagttagtt cttacacaac agcaactagt gaaagatggt
     1321 aaacctaaca gagaaaagat agaagggatg ttttctaact acgacaaaga taataacaat
     1381 gaaatacaac tagaagagtt aagcgatttt attagaggca ttgatttcgg agtagaacta
     1441 gatcataacg cagtgttgga tggaatagta aaggaattcg accatgatgg taatcttaca
     1501 attgggaaac aagaatttat agatggattc gttaaatgga tcgaaaaagc catgaatcac
     1561 gatccaagca tctcagaacc gcaaaaagca ttcgataagt ttgataagga tagttggaga
     1621 gaaatcgacg ctcccatgcc gttggagata ccaaaagcac atattttgta tgttatattc
     1681 ggagttggta taatgtactt gatatcagga gcgtttatgc aaagtgtcat acaattttca
     1741 aatgcagctc acataccgtt tcgctttaca tcatttgtta tggctccact tgcaatgaac
     1801 actagaatgg taattacagc gctcctcaac gttggagtac cacacgctac gaagaacgct
     1861 tctttgacat tttcggagat gtacaatgga ttagtgatga ataaccttct aggtttgtta
     1921 acattgctca ttactgtata tgtcaaacaa ttatcttgga tatattccga tgaggtgcta
     1981 tcgatcatga taccttgcgc gatgattggc ttattcgcgt ttagccgtga cacctacccg
     2041 ttgtgggctt ccatctctgc gatgtttctg tacccgatct cgatctacat atattatctt
     2101 atggctcctt aaaagtattt atagatagat gtcaa
//
LOCUS       XM_071831554            1648 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841331), mRNA.
ACCESSION   XM_071831554
VERSION     XM_071831554.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1648
                     /gene="LOC139841331"
                     /note="uncharacterized LOC139841331; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841331"
     CDS             41..1648
                     /gene="LOC139841331"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687655.1"
                     /db_xref="GeneID:139841331"
                     /translation="MEVEEAMDGGLRTRTRKQYTSDVVPSVTNVENGDEQPSENSTYL
                     NIRDAVEDLDLNKIISAVQNNMMSENEEKQSAIASKEETKGKSKRLKDEEIVEEELVE
                     LEFEKAVAKLNTHTMQCPNCNHQITKVVLRRKLIKRPTQFTDVPIKEKEEQRDLLGCF
                     SCFSLFTSSDNGGFTRFPMFWNKPSVNEVSRPDQNEVVPSEDGNCFSIFRVFRREQIL
                     KKPPPQKVDQEYEQGNIGQADRQPSTTSDNIKYDNSKHPIKQGANGGSYVGGPSKPIN
                     HPSVYVRPQKQKEEKDDMQIDIDIIPEDSTEVPDHAPIQRRQDSTSFEILKSIVYGGL
                     MEVIASLSVVASAAAGDATTMNIIALALANLVGGVLVIGHNLWDLRDDCYKFSSQQSD
                     NQEPRNKYKELLGSVQHFPLHVFFAILSFLVFGIIPPLAYGYSFHETNDRDFTMLVVA
                     VASFVCVGLLAIFKAYIDRCNTFGGYIKTITYYLTTAVAVSGVSYAVGSLVTRLIEEL
                     GLFETNPGVAASLLPKVVGSNPFIAVY"
     misc_feature    1010..1546
                     /gene="LOC139841331"
                     /note="CCC1-related family of proteins; Region: CCC1_like;
                     cl00278"
                     /db_xref="CDD:469703"
ORIGIN      
        1 catatcaaaa gcttccaaca acatttaaga agctgcaaag atggaagtag aagaggcaat
       61 ggatggtgga ttgagaacaa gaacacgaaa gcaatacacg agtgacgttg ttcctagcgt
      121 gacaaatgta gaaaacggcg atgaacaacc atctgagaat agcacttatt taaacataag
      181 agacgcggtt gaagatcttg atcttaataa gattataagc gctgttcaga acaatatgat
      241 gagcgaaaat gaagaaaagc aaagtgctat tgctagcaaa gaagaaacta aaggaaaatc
      301 caaaagactc aaagatgaag aaattgtgga agaggaacta gttgagttag aattcgagaa
      361 ggcagtagct aaacttaaca cgcatacgat gcagtgccct aattgtaatc atcaaatcac
      421 caaagttgtt ctacgacgaa aattaatcaa gaggcctacg caatttactg acgtaccgat
      481 taaagaaaaa gaagagcaac gagatcttct tggatgcttc tcgtgcttta gtttgttcac
      541 atcatcagat aatggaggat tcacccggtt tcctatgttt tggaataagc catcggtgaa
      601 tgaagtatcg cgacctgatc aaaacgaagt cgtccccagt gaagatggaa attgtttcag
      661 catctttaga gtctttcgac gagaacagat tttaaaaaaa ccaccaccac aaaaagttga
      721 tcaagaatat gaacagggga atataggaca ggctgatcgc caaccttcaa cgacctccga
      781 caacatcaaa tacgataata gcaaacatcc cattaaacaa ggagcaaatg gtggatcata
      841 cgttggagga ccatctaaac cgattaatca tccgtctgtt tatgtgagac ctcaaaaaca
      901 aaaagaagaa aaagatgaca tgcaaattga tattgatatt ataccagagg actctactga
      961 agtcccagat cacgcaccta tacaaagaag acaggattca acatcttttg agatcttgaa
     1021 aagtatcgtt tatggtggtt taatggaggt gatcgcaagt ttaagtgttg tagcatctgc
     1081 tgctgctggt gatgccacta caatgaacat catagctcta gcgttggcga atctggttgg
     1141 tggggtcctt gtaattggcc ataatctttg ggacttaaga gacgactgct acaaattttc
     1201 tagtcaacaa tcggacaacc aagaaccgcg caacaagtac aaagagttac tcgggtcggt
     1261 tcaacatttc ccgttacacg tgttctttgc aatactatcg ttccttgtgt ttgggatcat
     1321 cccgcctttg gcctacggat actcgtttca cgagaccaac gatagggact tcaccatgtt
     1381 ggtggttgca gttgcatcgt ttgtatgtgt cggtttgtta gcaatattca aggcttacat
     1441 tgacagatgc aatacgtttg ggggttacat taagaccatt acgtactatt tgaccacagc
     1501 agttgcagtc tcgggtgttt cttacgcagt tgggagtcta gtaacgaggc ttattgaaga
     1561 gctaggtttg ttcgagacaa atccgggggt ggctgcatca cttttaccta aagttgtggg
     1621 gtcaaaccca tttattgcgg tctattaa
//
LOCUS       XM_071831555             579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841332), mRNA.
ACCESSION   XM_071831555
VERSION     XM_071831555.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..579
                     /gene="LOC139841332"
                     /note="uncharacterized LOC139841332; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841332"
     CDS             1..579
                     /gene="LOC139841332"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687656.1"
                     /db_xref="GeneID:139841332"
                     /translation="MSSRLFKRIINDIINYDVDPLPIHFEYFKQKTDALGRQGFTAIQ
                     KCTSVWHQLAYGTTVDMFDEYLQMAKGTSIICLNSFCKCVLELYVDEYLRKPTSSDIA
                     RLYSVHEGKHGFMGMLESIDCMHWKWKNCPTAWKGQYTSDHQGANNDVNVLNQSSLFD
                     DIKNGTASFAPFTVNINEYTNGYYLSDGIYSG"
     misc_feature    268..>570
                     /gene="LOC139841332"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagtagta gattatttaa gcgtatcatc aatgatataa tcaattacga tgtcgatcca
       61 ttaccaattc attttgaata ttttaaacaa aaaactgatg ctcttggtcg acaaggcttt
      121 actgcgatac aaaaatgtac atctgtttgg catcaattgg cctatggtac aaccgtggac
      181 atgtttgacg aatacttaca aatggctaaa ggtacatcaa ttatctgtct taatagcttt
      241 tgtaaatgtg ttttggaact atatgttgat gaatatttga ggaaaccaac gagtagcgac
      301 atagctcgtt tgtatagcgt gcacgaagga aaacatgggt ttatgggaat gcttgaaagc
      361 attgactgca tgcattggaa gtggaagaat tgtccaacgg cttggaaagg gcaatatact
      421 agtgatcatc aaggtgcaaa caacgatgtt aatgttttga atcaatcttc gttgtttgat
      481 gacatcaaga atggaactgc atcatttgct ccatttactg taaatataaa tgaatataca
      541 aatggttatt atttatcgga cggtatttat tcagggtag
//
LOCUS       XM_071831556            2787 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841333), mRNA.
ACCESSION   XM_071831556
VERSION     XM_071831556.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2787
                     /gene="LOC139841333"
                     /note="uncharacterized LOC139841333; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841333"
     CDS             1..2787
                     /gene="LOC139841333"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687657.1"
                     /db_xref="GeneID:139841333"
                     /translation="MQVKRLTGKDLHYKLLQSQGALSGQSVWPVIDVVNVLFMLFNSM
                     ADGAITMINNLDFGDPLSMLLALGTKNKLGFINGSLQRHATDVTLQNQWDRCNNVLKE
                     TYDKIDGSVICNLHHKMNSIKQNDSILSDYYHNLNSLWKQYDCMIAGPACTCGVACTC
                     PAGVFAKEQSKVQKLMQFLMGLNDCYVSVRSNILLRDPLPDVKSAYALLSREESHRNL
                     NSKENVVTKTQTSAFIAQTFNKDANPNNNNNSRFNNSRGPNQNLKCKKCNKLGHTIDR
                     CFEIVGYPPGFKKNFNNNNNYKPNQGYQNNFKSVSNNSTASKETSTSSPSLSFSNEQM
                     MKLLSLINDSPDTVNTQSNMVGTFFNCSVKFYLNFNKFFSASNLESKHVFKGWVIDSC
                     ANQHMTFSEKGLFNLVNISDLKLTVGHPNGTQALIKSIGNLKINNHITLFDVLVVPEY
                     CVSLMSVFKLSKDNKVSIRFDDKKCYIQDLMDLKIKGTGRQDGGLYLLDSSDDSSFTA
                     NNCVSNYHASCKLWHARLGHPSDQVLNVLKTKLSLKGDLNTEPCEIFHKAKQTRLPFP
                     LSEQKTTSLGEIIHLDLWGPFKIQSKEGFKYFLTIVDDYSRAIWIYMLKSKEDVHDNV
                     FSFVQLLENQFTKRIKIIRSDNGTEFLNNKMADFLKTKGIIHQTTCAYTPQQNGVVER
                     KHRHLLNVARALMFQGGLPLNMWSECVLTACYLINRTPTAVLNGKSPYELIFKTEPNL
                     SYIKFFGCLCFSTVLNPSDKFSSRSIKCILIGFSSVKKGYKLYNLDDKSVFFSRDVKF
                     YETVFPLRMKPVDEKQNDNDLYKMNFFYQIFLSTNDTSSPYDEERSNSDGLLIEITLG
                     LLLTFHLIELQLVVSGFIGSNINLVVKLKDIKLDLLLKNNWPLFQLDINNDFLYGDLK
                     EEVYMTLQDNGMKN"
     misc_feature    <184..243
                     /gene="LOC139841333"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    1480..1680
                     /gene="LOC139841333"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1726..2022
                     /gene="LOC139841333"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgcaggtta aaaggttaac tggaaaggat ttgcattaca agcttttaca aagtcaaggg
       61 gctctttctg gacaaagtgt ctggccagtg attgatgttg tgaatgtgtt atttatgctt
      121 tttaattcta tggctgatgg tgctattact atgattaata accttgattt tggggatcca
      181 ttgtctatgt tattggcttt aggtactaaa aataaacttg gttttattaa tggatcttta
      241 caaagacatg caacagatgt tactcttcaa aatcaatggg ataggtgtaa caatgttctt
      301 aaagagactt atgataagat agatggttct gttatttgta atctgcatca taagatgaat
      361 tctattaaac aaaatgatag tattttgtct gattattatc ataatttgaa tagtttgtgg
      421 aaacaatatg attgcatgat tgctggtcct gcttgtactt gtggtgttgc ttgtacttgt
      481 cctgctggtg tgtttgctaa agaacaaagt aaagttcaaa agttaatgca atttttaatg
      541 ggcttaaatg attgttatgt ttctgttaga agtaatattt tgttaaggga tcccttgcct
      601 gatgtgaaaa gtgcttatgc tctcttgtct agggaagaat cacataggaa tcttaattct
      661 aaagaaaatg tggtcactaa aactcaaaca tctgctttta ttgctcaaac ttttaataaa
      721 gatgctaatc ctaacaataa taacaactct agatttaaca atagtagagg acctaatcag
      781 aacttaaaat gtaaaaaatg caataaatta ggtcatacta ttgatagatg cttcgagatt
      841 gtaggatatc cacctgggtt taagaaaaac tttaataata acaataatta taaaccaaat
      901 caggggtatc aaaacaattt taaaagtgtt tctaataata gtactgcttc taaagaaact
      961 agtactagtt ctccttctct gtctttttca aatgaacaga tgatgaagct tctcagtctt
     1021 ataaatgatt cacctgatac tgttaatact caatctaata tggtaggtac ttttttcaat
     1081 tgtagtgtga aattttattt aaactttaat aaattcttta gtgcttccaa tcttgagtca
     1141 aaacatgttt ttaaaggatg ggtaattgat tcatgtgcaa atcaacacat gactttttct
     1201 gaaaaaggtt tatttaacct tgttaatatc tctgatctaa aattaactgt tggtcatcca
     1261 aatggaactc aagctttaat caaaagtatt ggaaatctga aaattaataa tcatataaca
     1321 ttgtttgatg ttcttgttgt gcctgaatat tgtgtcagtc ttatgtctgt ttttaaattg
     1381 tctaaagata ataaagttag tatcagattt gatgataaaa aatgctatat tcaggatttg
     1441 atggacttga aaataaaagg gactggtaga caagatggtg gattatattt gttagatagt
     1501 tctgatgatt cttcttttac ggctaataat tgtgtgagta attatcatgc ttcttgtaaa
     1561 ctttggcatg ctagacttgg tcatccttct gaccaagttc tcaatgttct taaaactaaa
     1621 ctttctttaa aaggtgatct aaatacagaa ccttgtgaaa tttttcataa ggctaaacaa
     1681 actaggttac cttttcctct aagtgaacaa aaaactacaa gccttggtga aataattcat
     1741 cttgatttgt ggggtccatt taaaattcag agtaaagaag gttttaaata tttcttaacc
     1801 attgttgatg attactctag ggctatttgg atctatatgc ttaaaagtaa agaagatgtg
     1861 catgataatg tgttcagttt tgttcaacta cttgaaaatc aatttactaa aaggattaaa
     1921 attattaggt ctgataatgg aactgaattt cttaacaata aaatggctga ttttttgaaa
     1981 actaaaggca ttattcatca aaccacttgt gcttacacac ctcaacaaaa tggggttgtt
     2041 gaaaggaaac ataggcactt gctaaatgta gcaagagcct taatgtttca aggaggatta
     2101 cctttaaata tgtggtctga atgtgttcta actgcttgtt atttgattaa taggactcct
     2161 actgctgtgc tgaatggaaa atctccgtat gaacttattt tcaaaactga acctaacctc
     2221 tcatatatta agttctttgg ttgcttgtgt ttttcaactg ttttgaatcc ttctgataaa
     2281 tttagtagca ggtctatcaa atgtattttg attggttttt ctagtgtcaa aaaaggttat
     2341 aaactttaca atttggatga taaaagtgtt tttttctcta gagatgtaaa attttatgaa
     2401 actgtttttc ctttaagaat gaaaccagtt gatgaaaaac aaaatgataa tgatttgtac
     2461 aaaatgaatt tcttttacca aatattttta agcaccaatg acacttcaag tccctatgat
     2521 gaagagaggt ctaatagtga tggtctctta atagaaataa cacttggatt attactgacc
     2581 ttccacctaa tagaactcca gttggtagta agcggattta taggatcaaa tataaatcta
     2641 gtggtgaaat tgaaagatat aaagctagac ttgttgctaa agaataattg gcctcttttt
     2701 caacttgata ttaataatga ttttctttat ggtgacttaa aagaagaagt ttatatgacg
     2761 ctccaagaca atggaatgaa aaattaa
//
LOCUS       XM_071831557            1119 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841334), mRNA.
ACCESSION   XM_071831557
VERSION     XM_071831557.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 39% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1119
                     /gene="LOC139841334"
                     /note="uncharacterized LOC139841334; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841334"
     CDS             190..1119
                     /gene="LOC139841334"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687658.1"
                     /db_xref="GeneID:139841334"
                     /translation="MYADRVDTAPKNSIKDRLNIGTLENSGRRRQVTGKRQRQDDDKW
                     EHDLYEQADPQVSNRRVGVLDLRSKLQNKGSLSGVRDLREKLSGLTNSQPAVTAPAKP
                     KMAPNSGPIRRSVVAKVPATETRKVASTGETVDSFLQDLGLEKYSITFQAEEVDMTAL
                     LHMTDEDLKAIGIPMGPRKKILLALEAKLVVFIYQWGLGRVHQVLLLFAAFLITFLSI
                     TIPIVSQPTKVEESDGSSTVNGEKFAHFHRIFSGFHGFPFPFPFPFPAGFPGFPPGWW
                     GRFPDRPGPGGYSGGHGKPKVHKFDESNKNSSP"
     misc_feature    589..747
                     /gene="LOC139841334"
                     /note="SAM (Sterile alpha motif); Region: SAM_superfamily;
                     cd09487"
                     /db_xref="CDD:188886"
ORIGIN      
        1 tgttaaataa tgacccgatt gaagcacctt taatttaatt cgattattaa ttgattttcc
       61 gaaccttatg ttcccccaat tttgagctac tgaacaattt ttatacaatc atcacatcac
      121 aggaggcttt agggttaggg ttttaacata tcctcctttt gttacgattc catttaattt
      181 tataaaagaa tgtacgccga tcgtgtggat actgccccta agaattcaat taaagaccgt
      241 cttaatatcg gaaccctaga aaactccggc cgccgtagac aagttaccgg caagaggcag
      301 aggcaagatg atgataaatg ggagcacgat ctctatgaac aagctgatcc acaagtatca
      361 aatcgaagag ttggtgtcct tgatctccgc tcgaagctcc aaaacaaggg atctttgtca
      421 ggtgtaagag acttgcgtga aaagctatcc ggtttaacaa attctcaacc agcagtaaca
      481 gctccggcaa agccaaaaat ggcaccaaat agtggtccta ttaggagaag tgttgtagct
      541 aaagtacctg caacagagac taggaaagtt gctagcactg gtgaaacagt ggacagcttc
      601 ttacaggatc tgggtcttga aaagtattcg attacatttc aagcagagga agtggatatg
      661 actgcccttt tacacatgac tgatgaagat ctaaaggcta taggaatacc aatgggtccg
      721 agaaaaaaga tcctcctggc attggaagct aaattagttg tttttatata tcaatgggga
      781 ttggggagag ttcatcaagt attgttattg tttgctgcat ttcttataac tttcttgagt
      841 attacgattc cgattgtaag tcaaccaaca aaggtcgaag agtctgatgg atcgagtacg
      901 gtaaacggtg agaaattcgc tcattttcac aggatctttt ctggttttca tgggtttcca
      961 ttcccattcc cattcccatt tccagcaggg tttcctggat tcccaccagg ttggtggggt
     1021 cgttttccgg accgtcctgg tcctggtggc tattcaggcg gtcatggtaa accaaaggtg
     1081 cacaaatttg acgaatctaa taaaaattca tctccgtga
//
LOCUS       XM_071831558             708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841335), mRNA.
ACCESSION   XM_071831558
VERSION     XM_071831558.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..708
                     /gene="LOC139841335"
                     /note="uncharacterized LOC139841335; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841335"
     CDS             1..708
                     /gene="LOC139841335"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687659.1"
                     /db_xref="GeneID:139841335"
                     /translation="MSESKRTINLYCPALSKVAQVVALDHQRLDLGAIARAFGLDPAT
                     VKLNGHFISRGVDLIASSVTWKSLVSFFSLRGLSTGVCGSQPLIVDGKLLKPGSKRVH
                     DSENAILNRRTKLEESNLSKKKKFNDLDINRGIGVSIPFSLKRKQDDLNSSLKKLKVD
                     NEQGMQIKAQLPCSFLGVNMKRNWEEETIVPVAWIPKIEDKLSNSLDALSGKDENFMV
                     FDDLYSDRYLSEVTSDL"
ORIGIN      
        1 atgtcggaat ccaaaagaac gataaaccta tattgcccgg cgctatcaaa ggttgcgcaa
       61 gtggttgcgc ttgaccatca acgacttgat ttaggtgcta ttgcccgcgc gtttggattg
      121 gaccctgcga cggtgaagtt aaacggccat tttattagta gaggtgttga tcttattgct
      181 tcctctgtta cctggaaatc tctagtttcg ttttttagct tacgtggact ttctaccgga
      241 gtttgtgggt cccaaccgtt gatcgttgat ggcaagttac ttaaacccgg ttctaaaaga
      301 gttcatgatt cagaaaatgc gattcttaac aggagaacta aacttgagga gtcaaacttg
      361 agcaagaaaa agaagttcaa tgatcttgat attaataggg gaattggtgt gagtattcca
      421 tttagcctga agagaaagca agatgatcta aattcttctt taaagaaatt aaaagtagac
      481 aatgaacaag gtatgcaaat caaagcacaa ctcccgtgca gttttctcgg cgtaaatatg
      541 aaacggaatt gggaagaaga gacgattgta cctgttgctt ggattccgaa aattgaagac
      601 aaactgagta attctcttga tgcattgtct gggaaggatg agaatttcat ggttttcgat
      661 gatctttaca gtgataggta cctttcagag gttacatctg atctatag
//
LOCUS       XM_071831559             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841336), mRNA.
ACCESSION   XM_071831559
VERSION     XM_071831559.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139841336"
                     /note="uncharacterized LOC139841336; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841336"
     CDS             1..576
                     /gene="LOC139841336"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687660.1"
                     /db_xref="GeneID:139841336"
                     /translation="MEDENIVDMIRYDQNSGTKKNWKTFNDKLCLKRAGKAWKSSVHI
                     PASDISMPKPNRMMVRHGSYRYASEDDMDELDGEATRQLGQIDRQRSTRLLPVETDPE
                     EDENNERRTEDKQGDEQQMSLLSLLSTDGSNYLDNGEQEEEEQVEEHEEDTGDCNVCS
                     KCKGKHKGEALGPCGHTFCKNCTKELHVSRA"
     misc_feature    466..570
                     /gene="LOC139841336"
                     /note="zinc-RING finger domain; Region: zf-RING_5;
                     pfam14634"
                     /db_xref="CDD:434085"
ORIGIN      
        1 atggaagacg aaaatatagt tgatatgatt cgatatgatc aaaattcagg aacaaagaaa
       61 aactggaaaa cgtttaatga caaactttgt ctcaaacggg ctggaaaagc atggaaatca
      121 tcggtccata tccctgcatc agatatatcc atgcctaaac caaatcgtat gatggtacga
      181 catggttctt ataggtatgc aagtgaagac gatatggacg agttagatgg tgaggcaact
      241 cgacaattgg gacagattga tagacaaaga agtactagat tactcccggt tgaaacggat
      301 ccagaagagg atgaaaacaa tgaaaggcga accgaggata aacaaggaga tgagcaacaa
      361 atgtcgttgt tatcgttgtt gagtacggat ggatctaatt atttggacaa tggtgaacaa
      421 gaagaagaag aacaagtaga ggaacatgaa gaggatacgg gagattgcaa tgtttgtagc
      481 aaatgcaaag ggaaacataa gggtgaagca ttaggaccat gtgggcacac attttgcaaa
      541 aattgtacta aggagcttca tgtctctaga gcctga
//
LOCUS       XM_071831560            2367 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ent-copalyl diphosphate
            synthase 1-like (LOC139841337), mRNA.
ACCESSION   XM_071831560
VERSION     XM_071831560.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2367
                     /gene="LOC139841337"
                     /note="ent-copalyl diphosphate synthase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139841337"
     CDS             1..2367
                     /gene="LOC139841337"
                     /codon_start=1
                     /product="ent-copalyl diphosphate synthase 1-like"
                     /protein_id="XP_071687661.1"
                     /db_xref="GeneID:139841337"
                     /translation="MYADPRRCPITFNVGDQVYLKVLPWKGVIKFGKREQHSDLPCLK
                     ERHSIEEYVKAIQLIFGSMDDGATTISAYDTAWVALIENVNGPSGGPQFPSSLQWIAN
                     NQLVDGSWGESSLFSACDRLLNTLACVVALTTWNVHADKCEKGMKFVYENLNKIRHEK
                     EEHFTSGFELGFTTLIELAQKLDIKMPYDSPILKKIHAIRDAKLKKIPKDIFYETPTI
                     FHYSLEGMKDLDWKKLLKLQAKNGSFVLSAAPTSMVYMQTKDQKCLAYLTTLVAKFNG
                     GVPNAYPVDMFERSWMVDRLQRLGIAHYFHSEIKDCVDHLYRYWDERGIGLGRNCNLP
                     DLDDTVMAFRVLRTYGYKVSPDVFQQFEKDRRYMCYQWQSTEAVTVMFNLYRVSQMSF
                     PEEKILDDTKKFSQKFLLEKQSTNELWDKWIVTKDLSGEVEYALNVPWYASLPRLETR
                     YYLEQYGGADDVWTGKVLYRMPNVSNNIYLEMAKLVYNHCQAIHQLEWSRIQKWYAHL
                     NIEDSSNMRLLWSYYLAASSIFEPERCNERVAWAKTSIILDVITSFFSEDSNIVMKEF
                     IDEFSNPQHHHKDEKRWHMVMNLLHETINQISSEAFIAHGVDILPYLHSAWKTWLSNQ
                     QKGVGSEAELIVRTITMSGGRWSLEEVLSHPQYQQISSITNDLCHKISNKDDTTLGFT
                     VESKMQELVQLVYCHSPNDLDPDLKMTFLTVAKTFYYRVNIDPKTINNHIHKVLFESE
                     RNKGEAPRAQAGWLDAACCHWRPAGREGGWGGRWYRWERSNKLNTIYG"
     misc_feature    103..2214
                     /gene="LOC139841337"
                     /note="ent-copalyl diphosphate synthase; Region: PLN02592"
                     /db_xref="CDD:215321"
ORIGIN      
        1 atgtatgctg atccgcgtag atgtccgata acatttaatg taggggatca agtgtatctg
       61 aaagttttac catggaaagg ggtgatcaag tttggtaagc gtgagcaaca tagtgatttg
      121 ccatgtctaa aagaacgaca ttcaattgag gagtatgtca aagcgattca attaattttt
      181 ggttcgatgg acgatggggc aacaactatc tcagcttacg acacagcttg ggtcgcgctt
      241 atagaaaatg tcaacggacc aagtggtggc cctcagttcc catcaagctt acaatggatt
      301 gcgaacaatc aactcgttga tggctcgtgg ggcgaatcgt cattgttttc tgcatgtgat
      361 aggcttctca atacgttggc ttgtgtggtc gcactaacta cttggaatgt tcatgccgat
      421 aaatgtgaaa aaggaatgaa atttgtgtac gaaaatttga acaagatcag acatgagaag
      481 gaagaacatt ttacatctgg attcgagtta gggttcacta cgctcatcga acttgcacaa
      541 aaactagata tcaaaatgcc atacgattcg cctatcttga aaaagattca tgcaatacga
      601 gacgcgaagc taaaaaagat accaaaggat atattttacg agacaccaac aatttttcat
      661 tatagcttgg aagggatgaa agatttagac tggaaaaagc ttctaaaact tcaagcaaaa
      721 aatggatctt ttgtgttatc tgcagcacca acaagcatgg tatacatgca aacaaaagat
      781 caaaaatgtc ttgcatattt gacaactctg gttgccaaat ttaacggagg agtcccaaat
      841 gcataccctg ttgacatgtt tgaacgaagt tggatggtag atcgtctaca acgccttgga
      901 attgcccact attttcattc tgagatcaag gattgtgtcg atcatcttta caggtattgg
      961 gatgaacggg gaatagggct tggtagaaat tgtaatttac cagatcttga tgacaccgtt
     1021 atggcttttc gagttttaag aacttacgga tataaagttt ctcctgatgt gtttcaacaa
     1081 tttgagaaag acagaagata tatgtgttat caatggcagt caactgaagc tgtaactgtg
     1141 atgttcaatt tatatcgagt ttcacaaatg agttttcctg aggagaagat cctggatgat
     1201 accaagaaat tttctcaaaa atttttgtta gaaaaacaat ccactaatga gctttgggat
     1261 aaatggatcg tcactaaaga cttgtcgggg gaggttgaat acgcactcaa tgtaccatgg
     1321 tatgctagct tacctcgact agagacacgg tattacttgg aacaatatgg tggtgccgat
     1381 gatgtttgga ccggaaaagt actttatagg atgccaaatg taagcaataa catatatctc
     1441 gagatggcta aattggttta caatcactgt caagcaattc atcagcttga gtggagccgt
     1501 attcaaaaat ggtatgcaca tctaaacatt gaagatagct caaacatgag acttttatgg
     1561 tcatattatc tagccgcgtc aagcatattc gagccagaaa gatgcaatga gcgagttgct
     1621 tgggctaaaa caagtataat tctcgatgtc attacatcct tcttttccga ggactcaaat
     1681 attgtcatga aagagttcat agatgaattc tcgaaccctc aacaccatca taaagatgaa
     1741 aaacgatggc acatggtgat gaacctactt catgaaacca tcaaccagat ctcatcagaa
     1801 gcattcatag ctcatggtgt agacatcctt ccgtacctcc atagcgcatg gaagacatgg
     1861 ttatccaacc aacaaaaagg agtgggcagt gaagccgaac tcatagttcg aactataacc
     1921 atgagcggcg gccgatggtc attagaagag gtgttatctc atcctcaata tcaacaaata
     1981 tcatctatca ctaatgacct ttgtcacaaa atctctaata aggacgacac tactttaggc
     2041 ttcactgtgg aatcaaaaat gcaggagcta gtgcaactcg tgtactgtca ctcacccaat
     2101 gatcttgatc ctgatttgaa gatgacattt ttaacggtag ccaaaacttt ctattatagg
     2161 gtgaacattg atccaaagac tataaacaac cacattcata aagtgttgtt tgaaagtgaa
     2221 aggaacaagg gcgaggcacc gagggcgcaa gcagggtggc ttgatgcggc ttgctgccat
     2281 tggcgccctg cagggcgtga gggagggtgg ggtggaagat ggtaccgatg ggagcgctct
     2341 aacaaactaa acacaatata cggataa
//
LOCUS       XM_071831561             711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841338), mRNA.
ACCESSION   XM_071831561
VERSION     XM_071831561.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..711
                     /gene="LOC139841338"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841338"
     CDS             1..711
                     /gene="LOC139841338"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687662.1"
                     /db_xref="GeneID:139841338"
                     /translation="MKLSSNAGAPVEDPTKYRSLAGALKYLTFTRPGISYAVQQVCLH
                     MHDLREPHMHALRHIIRYLQGTLHYGLQLYKSPSRRLVAYTDADWAGCPDTRRSTSGY
                     CVYLGDNLVSWSSKRQPTLSRSTAEVEYRGVANVVSDTCWIRNLSLELHCPIPKCTLV
                     FCENVLAIFLSENRVQHQRTKHIEMYIHFVREKVTRGEVSVMQVRIRINVGVKFTNGG
                     PGIKLGCMFYWAGRKSGV"
     misc_feature    244..630
                     /gene="LOC139841338"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(256..267,370..378,385..387,487..489,565..567)
                     /gene="LOC139841338"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaattaa gcagtaacgc aggagcgcca gttgaagatc ccactaaata ccgtagtttg
       61 gctggtgcgc taaagtacct cacttttact cgacctggca tctcctatgc agttcaacaa
      121 gtttgtcttc atatgcatga tctacgagaa cctcacatgc atgccttacg tcacatcatt
      181 cgttacttac aaggtacttt acattacggt ttacagttgt ataaatcccc tagtcggcgt
      241 cttgttgcgt atacagatgc ggattgggca ggctgccctg atacacgtcg ttctacatca
      301 ggctattgtg tttatcttgg cgataatttg gtttcttggt cttcgaaacg acaacctact
      361 ttgtctcgtt ctactgccga agtcgaatat cgtggcgtgg ctaacgttgt ttctgataca
      421 tgttggatta ggaatctctc gttggaatta cattgtccta ttccaaaatg tacgcttgtt
      481 ttctgtgaaa atgttttggc tatattctta tctgagaatc gtgttcaaca tcaacgcacg
      541 aagcatattg agatgtatat tcattttgtt cgcgaaaagg ttacccgtgg tgaggtcagt
      601 gtgatgcagg tgcgaataag aatcaacgtc ggagtcaagt ttacaaatgg aggtccagga
      661 atcaagttgg gctgcatgtt ctattgggct ggaagaaagt cgggtgttta a
//
LOCUS       XM_071831562             417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841339), mRNA.
ACCESSION   XM_071831562
VERSION     XM_071831562.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139841339"
                     /note="uncharacterized LOC139841339; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841339"
     CDS             1..417
                     /gene="LOC139841339"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687663.1"
                     /db_xref="GeneID:139841339"
                     /translation="MANGKFVKVDRIYKKCNLTLANKTFKVDLLPVELGSFDVVLGMD
                     WLSPMKVGIQCFDKTINIPLETGEILIIQGDKSGSKLNLISCIKTRKYLMKGCQAILA
                     HIKEVKPDERRIEDVPVIKDFSEVFPDELPGLPPQR"
     misc_feature    <34..180
                     /gene="LOC139841339"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atggccaacg gtaaatttgt aaaagttgac cggatctaca agaaatgtaa tctgactcta
       61 gccaataaaa ccttcaaggt tgacttattg cctgttgaac taggaagctt tgatgtagtc
      121 ttaggaatgg attggttatc cccgatgaaa gtgggtatcc agtgttttga taagacaatt
      181 aatattcctc tcgaaactgg tgaaattctt attatccaag gagataagag tggttccaaa
      241 cttaatctta tctcatgcat caaaacccga aagtacctta tgaaaggatg tcaagccatt
      301 ttggctcaca taaaggaagt caagccagat gaacggcgta ttgaagacgt tcctgttatt
      361 aaagactttt ctgaagtttt tcctgatgaa ctccctggtc ttccaccaca aagataa
//
LOCUS       XM_071831563             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841341), mRNA.
ACCESSION   XM_071831563
VERSION     XM_071831563.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139841341"
                     /note="uncharacterized LOC139841341; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841341"
     CDS             1..837
                     /gene="LOC139841341"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687664.1"
                     /db_xref="GeneID:139841341"
                     /translation="MRLKDRFKRLYRLESKPEVTVNERVVVEEGKWSFMWQWRRQLSG
                     RLLGEFSLLTAAVEGDSSLGTGPRLWKCKVSGKNVFCTNIIAKKLDELILQNDGSATE
                     TLRNNIIPQKVGIFIWRALRKRIPVRDELVKKGMILDSLNCPMCNEVVETVDHALLSC
                     KFAKDIWLGVYKWWGLSFPLNDNIDNILKGDGYIGSSGFKKKIWQVIVWTTGHFIWKN
                     RNQQTFKDDCWAPPRVISEIQIKTFEWIISRSRIKSIDWHQWLLHPSSLCFPQVNNRD
                     PG"
     misc_feature    <316..498
                     /gene="LOC139841341"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaggctta aagatagatt caaaaggtta tacagattag aatcgaagcc agaagtgacg
       61 gttaacgaaa gagtggttgt tgaggaagga aaatggtcgt tcatgtggca atggaggagg
      121 caactttcgg gcagattact aggggaattc tccctgttaa cagctgcagt cgaaggggac
      181 tcatcactcg gtaccggtcc tagattgtgg aagtgcaaag tctcgggtaa aaacgtcttt
      241 tgtaccaata ttatcgcaaa aaaacttgat gaattgattc tacaaaatga tgggtctgct
      301 accgaaacac tcaggaacaa cataatacct caaaaggtgg gaattttcat ttggcgagcc
      361 ttgagaaaaa ggattccggt tagggatgag ttagtcaaaa aaggtatgat ccttgactca
      421 ttaaattgtc ccatgtgtaa cgaagttgtt gagacggtcg atcatgccct attatcatgt
      481 aagttcgcaa aggatatttg gctaggtgtg tataagtggt ggggtttatc cttcccgttg
      541 aatgataaca tcgacaacat tcttaaaggg gacggttata ttgggtcctc cgggtttaaa
      601 aagaaaatat ggcaagtaat agtgtggacc acgggacatt tcatttggaa aaatagaaac
      661 caacaaacgt tcaaagatga ttgttgggca cctccgagag ttataagcga aattcagatc
      721 aagacttttg aatggatcat tagccgttcg aggattaaat cgattgattg gcaccaatgg
      781 cttctacatc cgagttcgtt gtgcttcccg caagtaaaca atagagatcc gggttga
//
LOCUS       XM_071831564            1305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841342), mRNA.
ACCESSION   XM_071831564
VERSION     XM_071831564.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1305
                     /gene="LOC139841342"
                     /note="uncharacterized LOC139841342; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841342"
     CDS             1..1305
                     /gene="LOC139841342"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687665.1"
                     /db_xref="GeneID:139841342"
                     /translation="MSNSDEESLVNAMKSIFAYRNNVVIRREVEEQNEAQSSRRKRRY
                     IHRDRVEAHNRLMKDYFVQDPKYPPEYFKRRYRMSQSLLEKIIEGIFSYSTRPNAPKW
                     FTYFQQRPDARGVLGVSTILKVTSAIHQLAYGDSPDLFDEYLQISERTSRESLQNFTR
                     CIIDLYGNVYMREPTEYDIRRLYHKHEELHGFPGMLGSIDCMHWAWGKCPNAWKGHFT
                     RGDHSYPTIMLEAVASYDNWIWHAYFGMIGSNNDLNVLNASPLFDSLLTDTAPQVPYE
                     IGDVDFDRGYYLADGIYPSWASFVKGFSSVVDAKRKYFTKKQSAARKDVERTFGILQG
                     RWGILRQPDRAYSVNKIKRIMYGCIILHNMIIEDNGFNIAENKSYYLPVNNLQGSTWY
                     ERCDVYADKTKELRDKDEHEYLRHTLVSHLWHNCDDEIVNEL"
     misc_feature    508..1110
                     /gene="LOC139841342"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagtaatt ccgacgaaga aagtttggtt aacgcaatga aaagtatatt tgcctatcga
       61 aataacgtgg taatacgtag agaggtcgag gaacaaaatg aggctcaaag ctcaagacga
      121 aaacgtcgct atattcatcg tgatcgtgta gaagcgcaca atcgtttgat gaaagattat
      181 tttgttcaag atccgaagta tccccctgaa tatttcaaac ggcgttatcg aatgtcacaa
      241 agtcttcttg aaaaaataat tgaaggtata ttttcttact ctactcgtcc caatgcacca
      301 aagtggttta cttattttca acaacgtccc gatgcacgtg gtgttctcgg agtatctact
      361 attttaaaag tcacttctgc cattcatcaa ctagcatatg gtgattcacc ggatctattt
      421 gacgaatatt tacaaatttc agagagaaca tcacgcgagt ctttgcaaaa ttttacaaga
      481 tgtattatag acttgtatgg taatgtatac atgagagaac cgaccgagta cgatatacgt
      541 cgtttgtatc ataaacatga agaacttcac ggctttcctg gaatgcttgg aagcattgat
      601 tgtatgcatt gggcttgggg taaatgtcca aatgcatgga aagggcattt cacccgaggc
      661 gatcacagtt acccgacaat catgttggaa gccgttgcat cgtatgacaa ttggatttgg
      721 catgcatatt ttggaatgat cggttcgaac aatgacttga atgtccttaa tgcatctcca
      781 ttgtttgata gtttactaac tgacacggct cctcaagttc catacgaaat tggggacgtt
      841 gatttcgatc gaggctacta tcttgccgat gggatttacc cttcgtgggc ttctttcgtt
      901 aagggattct caagtgttgt tgacgcaaaa aggaaatact ttacaaagaa acaatctgca
      961 gctcgtaaag acgttgagag gacatttgga attttgcaag gtcgttgggg tattttaaga
     1021 caacctgata gggcatatag cgtaaacaaa atcaaaagaa tcatgtatgg ttgcatcata
     1081 ttgcacaaca tgataattga agacaatggt tttaacatcg ctgaaaataa atcttactac
     1141 ttgcctgtca acaacctaca aggatcaact tggtacgaaa ggtgtgatgt atatgccgat
     1201 aagacaaaag agctgcgtga caaagacgag catgagtatc ttcgacatac tctagtttcg
     1261 catctatggc ataattgtga tgacgaaata gttaacgaat tgtaa
//
LOCUS       XM_071831565             540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841343), mRNA.
ACCESSION   XM_071831565
VERSION     XM_071831565.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..540
                     /gene="LOC139841343"
                     /note="uncharacterized LOC139841343; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841343"
     CDS             1..540
                     /gene="LOC139841343"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687666.1"
                     /db_xref="GeneID:139841343"
                     /translation="MEGQNIAHDEHKTAKSFPCQFCSKEFYSSQALGGHQNAHKKERT
                     AARKAKTTANVQQYNYSSCLLSQNQMMFAPTNQIGILDPSLYTARAANLCQFQGQQFG
                     SDRTGRFDYLMYYRANYMNQNPYNQFDRQDEHQSDLNCQRSIIGNENEPEHMFVNVMS
                     ESKGVKHKDTQKLDLSLHL"
     misc_feature    49..126
                     /gene="LOC139841343"
                     /note="C2H2-type zinc finger; Region: zf-C2H2_6;
                     pfam13912"
                     /db_xref="CDD:433576"
ORIGIN      
        1 atggaaggcc aaaatattgc ccacgatgaa cataaaactg caaagtcttt cccatgtcaa
       61 ttttgttcaa aagaatttta cagttctcaa gctttaggag gtcatcaaaa cgctcacaag
      121 aaagaaagaa cagcagcaag aaaagctaaa acgacagcta atgtgcagca atacaattat
      181 tctagttgtt tgctttcaca aaatcaaatg atgttcgctc ctacaaatca gattggaatt
      241 cttgatccat ctctttatac tgctcgtgca gctaatctgt gtcagtttca aggccaacaa
      301 tttggatctg atagaacggg ccgattcgat tatcttatgt attacagagc caattacatg
      361 aatcagaatc cttataatca gtttgatcga caggatgaac atcaaagtga cttgaattgt
      421 cagaggagca taattgggaa tgagaatgaa ccagaacata tgtttgtgaa tgtgatgagt
      481 gagagtaaag gtgtaaaaca taaagatacc caaaagctcg atctttcact ccatttataa
//
LOCUS       XM_071831566             351 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841344), mRNA.
ACCESSION   XM_071831566
VERSION     XM_071831566.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..351
                     /gene="LOC139841344"
                     /note="uncharacterized LOC139841344; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841344"
     CDS             1..351
                     /gene="LOC139841344"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687667.1"
                     /db_xref="GeneID:139841344"
                     /translation="MSDTEESSSVTLINKLDFRDPLYLHASDTSGTSLISIKLKGTEN
                     YSVWSRALTLALNTKNKKGFIDGTCERNTYADDEVLLNQWDRCNAVVLTWILTSISDE
                     LYLGQIFSNDASVV"
     misc_feature    73..210
                     /gene="LOC139841344"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
ORIGIN      
        1 atgtctgata cagaagaatc ttcttctgta actttaataa acaaacttga ttttcgagat
       61 ccactttatc ttcatgccag tgatacttct ggtacttcat tgatttccat aaaactgaaa
      121 ggcactgaaa actacagtgt ctggagtaga gctttaacac ttgctttaaa tacaaaaaat
      181 aaaaagggtt ttattgatgg aacttgtgaa agaaacacct atgctgatga tgaagttctt
      241 cttaatcaat gggatagatg taatgctgtt gtcttgacat ggattttaac ttctatatct
      301 gatgagttgt atttagggca aattttttca aatgatgctt ctgttgtgtg a
//
LOCUS       XM_071831567            1935 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841345), mRNA.
ACCESSION   XM_071831567
VERSION     XM_071831567.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1935
                     /gene="LOC139841345"
                     /note="uncharacterized LOC139841345; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841345"
     CDS             167..1636
                     /gene="LOC139841345"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687668.1"
                     /db_xref="GeneID:139841345"
                     /translation="MGVKVASGCLNWSQSSIVNSQTLAAISSPSSKRRSFTDVSLVCR
                     HIHRSNLFGTKLNRSRSCESLKLSKVQHSLKRTASANFDSEFLKEVDHESSIRFHLSD
                     DEKPSSSDNQESEIQNSSQFADRQSASWSRDMIPGSIERKANSLDLPFSLRIIQKKKQ
                     WEGGVKGAKDCTYSSIKKAFSTMVFIIRELQSYTLQMREVLYLEDLQEILIRVQKEMN
                     ASFVWLFQQVFSHTPILMVHVMILLANYSVYSMSNNVALAAPPLSSIVETESTVSMME
                     KQKDEKFDFSSIRTFFVDSGGINGGGGKPRPVTSGTDDGEESVSGQVNGVEEWGLWKS
                     MVVEAEKMDRMKGNEGIDRETMQRFVSPVMVKIEEDVDADDYLKTEIVYQMGLAKEPN
                     NPLLLANYAQFLYLFAHDHKRAETYFKRASEIEPKDAEALSKYASFLWQAKNDLWAAE
                     ETFLEAISADPNNSFYAASYAHFLWSNGAEDTCFPLESP"
     misc_feature    <1280..1570
                     /gene="LOC139841345"
                     /note="Cytochrome c-type biogenesis protein CcmH/NrfG
                     [Energy production and conversion, Posttranslational
                     modification, protein turnover, chaperones]; Region: NrfG;
                     COG4235"
                     /db_xref="CDD:443378"
     misc_feature    1343..1438
                     /gene="LOC139841345"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1451..1540
                     /gene="LOC139841345"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     polyA_site      1935
                     /gene="LOC139841345"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatattttct ttcatcttcc gttttcatcg tgaaagtata gctgtatatc agtatatatc
       61 cccccttcac acatctttca ttttgtaaac ccagaattca tatcgccaac aaaattaatt
      121 tctacgttga ggttttataa tatagaatta ttaaataaat tgttaaatgg gagtgaaggt
      181 ggcgagtggg tgtttaaatt ggtcacaatc atcgattgta aactcacaaa cgttagcagc
      241 aatttcttca ccttcatcaa aacgacgtag ttttaccgac gtttcgttag tttgtcgcca
      301 cattcatcgg tcgaatctat tcggtaccaa actcaataga tctcgatcgt gtgaaagctt
      361 aaagttatca aaggtacaac actctttgaa aagaaccgca agtgcgaatt ttgattcgga
      421 gtttttgaaa gaagttgatc atgaatcgtc aatcagattc catttatctg acgacgaaaa
      481 accctcgtcg tcagataatc aagaatctga gatccaaaat tcaagccagt tcgctgacag
      541 acaatcagcg agctggtcca gggatatgat ccccggaagc atagaacgaa aggcaaatag
      601 cttagatttg ccattttcgt tacggattat acaaaagaag aaacaatggg aaggaggagt
      661 taaaggagca aaggattgta cttatagttc aataaagaaa gcgttttcta cgatggtgtt
      721 tataattaga gaactacaaa gttacactct acaaatgaga gaggttttat acttggaaga
      781 tttacaagag attttaataa gggtacaaaa agaaatgaat gcttcttttg tttggttatt
      841 ccaacaagta ttctcacata ctccaatttt aatggtgcat gtgatgatac tattagcgaa
      901 ctatagcgtt tattcgatgt cgaataacgt tgcgctcgca gcaccaccac tttcttccat
      961 cgtggaaaca gaatctactg tttccatgat ggaaaaacag aaggatgaaa aatttgattt
     1021 ttcatcgatc agaacgtttt ttgttgattc cggaggaatt aatgggggtg gtgggaaacc
     1081 tcgaccggtc actagtggta cggatgatgg tgaggagtcg gtttcgggtc aagtgaacgg
     1141 agtcgaggaa tggggtttat ggaaatcgat ggttgtagaa gcagaaaaga tggatagaat
     1201 gaaagggaac gaaggtattg atcgtgaaac tatgcaaaga tttgtgtcac cagtgatggt
     1261 gaaaatagag gaggatgtgg atgctgatga ttacttgaaa acggaaattg tttatcaaat
     1321 gggtttagct aaagaaccca ataatccgct tcttttagct aattatgctc agtttctcta
     1381 cctgtttgcc catgatcaca aaagggcaga aacatacttc aaaagggcat cagaaattga
     1441 gccaaaagac gcggaagcac taagtaaata cgcaagtttt ttatggcagg caaaaaatga
     1501 cttatgggcc gcagaagaga cctttttaga agccatttct gctgatccta acaactcgtt
     1561 ttatgccgct tcttatgcac attttttatg gtctaatggt gccgaagata cttgtttccc
     1621 gctcgagtcg ccgtagaatg cgagctcgga tgaattttaa atatagatac ggatactgat
     1681 ggaagcagaa gaaagaaaat aaggttatgg catttggtca ttttgtagtt tagattggta
     1741 cggagtagtt cctttgttag agatggaatg gaatgtttaa gttcagagta atagtgtttt
     1801 gattatgtgc atattgtttt ggaagtgttg tatgctgctc tggatttagt tgtttctgtt
     1861 ctcggaaaga gatatcttaa aaagaatttt gtacgtatga tacaataaaa aattaggtga
     1921 tcgttttttt ttaaa
//
LOCUS       XM_071831568            1932 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841346), mRNA.
ACCESSION   XM_071831568
VERSION     XM_071831568.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1932
                     /gene="LOC139841346"
                     /note="uncharacterized LOC139841346; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841346"
     CDS             1..1932
                     /gene="LOC139841346"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687669.1"
                     /db_xref="GeneID:139841346"
                     /translation="MGDNVKRTFEVSATSEKFTREIATHPLPAVLTTPLMLGVYDGTT
                     DLEDFLQQFEHAVKTQHWDSSTACHMFPGQLQAVAREWFAKLPSLSISNYTDLRTKFV
                     QCFQNFKRTELTDLDAHNIKMMSRESLMNIISRFTMECQKIPDLPESQQISAYIMGIC
                     QTRHLSLVKSMRRKLPKTYVEAVKMVKDYVRSEEFVDAAVGDHSTMDQSDKDDKGNSK
                     GNKGSEYKGSGSGGNRGYEHFGHKSDHRNSYRPYERYAPKRLSVEEESLIKSLTKMSK
                     EILTTEEVSKDFSPPKPMQPHFTVDESKWCIFHEDKGHDVDDCRELKKVIVERLKLRE
                     LDHLKSSRVKVPGTKKFAWQRGKEKAPEKHIHMVQMWHAGHVRNAKVLKEWECAPITF
                     PAFWRVCPTDLPVTITATVGRYKVSRIYVDTGSVVDVLSEHCFLQLPQDVQDKLKPPL
                     HPVVGFTGETTWPLGRVSIDVTLEENKKRRTVALNFVVVRSQSKYNIIMGREALCELG
                     AIVSTVHGMMKFPTSLGVATVFSDRVPIVGQVERPLHQTAPIEQLGSVIINHSFPKKT
                     IQIGHTLSDATKSALCELLANNADVFAWKESDMTGVPRTIAEHCLNANPSMTPVRQKK
                     RGMAPERSIFLRNEVEKLV"
     misc_feature    205..477
                     /gene="LOC139841346"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1261..1515
                     /gene="LOC139841346"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1264..1266,1270..1272,1276..1278,1357..1365,
                     1492..1494)
                     /gene="LOC139841346"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    1264..1272
                     /gene="LOC139841346"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    1264..1266
                     /gene="LOC139841346"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(1357..1368,1378..1389)
                     /gene="LOC139841346"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgggagaca acgttaagag gacgttcgaa gtttccgcga cgtctgagaa gtttacccga
       61 gagatagcca cccatccgtt acccgccgtc cttactactc ccctcatgct aggggtatat
      121 gacggcacta cggatctgga ggacttcctg cagcaattcg aacacgctgt caagacgcag
      181 cattgggata gctcaacggc gtgccacatg ttcccgggac agctccaagc cgtcgcgaga
      241 gagtggtttg ccaaattacc ttccttgagc atatccaact acacggacct cagaactaag
      301 tttgtgcagt gtttccagaa ctttaaacgc accgaactga ctgacctaga tgcgcacaac
      361 atcaagatga tgtcgcgtga atccctaatg aatattattt ctcgcttcac aatggaatgc
      421 caaaaaattc cagatctgcc tgaatcgcag cagatatccg cgtacatcat gggaatctgc
      481 caaactcgtc atttgtcgtt ggtaaaatcg atgcggcgta agttaccaaa aacgtacgtt
      541 gaagctgtaa aaatggtaaa ggattatgta cgatccgagg agtttgtaga cgcggccgtt
      601 ggtgatcaca gtacaatgga ccagagcgat aaagacgaca agggaaacag caaaggtaat
      661 aagggtagcg agtataaagg tagtggtagc ggtggcaaca ggggctacga acatttcggt
      721 cataagtctg accaccgtaa cagctaccgt ccttatgaac ggtacgcacc taagaggttg
      781 tcggtagaag aggaaagttt gatcaagtca ttgacaaaaa tgtctaaaga aattttgaca
      841 acggaagagg taagtaaaga tttttcgcca ccaaagccga tgcagcccca ttttactgta
      901 gatgaaagta aatggtgtat ttttcacgaa gataaaggtc atgatgtgga cgactgcagg
      961 gaactaaaga aggtgatagt tgaacggctg aaattaaggg aacttgacca tctaaaatcg
     1021 tcgcgtgtca aagtccccgg gacgaagaaa tttgcctggc aacggggaaa agaaaaagct
     1081 ccagaaaagc acatccacat ggtacaaatg tggcacgcgg gtcacgttcg taacgcgaaa
     1141 gttttgaagg aatgggaatg tgcccctatc acgtttcctg cattttggag agtctgtcca
     1201 actgacctac ccgtaacgat aactgctaca gtaggacgat acaaggtctc gagaatttat
     1261 gtagatacag gaagcgtcgt tgacgtcttg tccgaacatt gcttcttaca gctaccacaa
     1321 gatgtgcagg acaaactaaa accaccactc catcccgtcg tgggtttcac aggcgaaacg
     1381 acttggcctc tgggtcgagt aagcattgat gttacgttag aggaaaataa gaaacggcga
     1441 acggtagctt taaactttgt ggttgtcaga agccagtcaa agtacaacat tatcatgggg
     1501 cgggaagcgt tgtgcgaatt gggcgcgata gtatcaactg tgcatggcat gatgaaattc
     1561 ccaacttcgt taggcgttgc aactgttttc tctgatcgag tcccgattgt aggccaggtc
     1621 gaacgaccgc tacatcagac ggcaccgatt gagcaattgg ggagcgttat catcaatcat
     1681 tcctttccta agaagacaat acagattgga cacacgctat ccgacgcaac aaaaagtgca
     1741 ttatgtgaac tcttggcgaa caacgctgac gtgtttgcat ggaaagagtc agacatgacg
     1801 ggagtacctc gtaccattgc agaacattgc ttaaatgcca acccaagtat gactccagta
     1861 aggcaaaaga aacggggcat ggctccggag cgtagcatct tcctaaggaa tgaagtggag
     1921 aagttggtat aa
//
LOCUS       XM_071831569            1431 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides monooxygenase 2-like
            (LOC139841347), mRNA.
ACCESSION   XM_071831569
VERSION     XM_071831569.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1431
                     /gene="LOC139841347"
                     /note="monooxygenase 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841347"
     CDS             58..1302
                     /gene="LOC139841347"
                     /codon_start=1
                     /product="monooxygenase 2-like"
                     /protein_id="XP_071687670.1"
                     /db_xref="GeneID:139841347"
                     /translation="MQDCNCYHNHEDVDIVIVGAGLAGLTTALALHRLGLRSQVLESS
                     ESLRITGFALTLWTNAWRALDAVGIGDSLRQKSTQITGFKMASSDSGLFSPGQPLDKD
                     GKFEGYESRCVRRKDLMETLVNELPQGTIRYSSKVVSIDTEDHFKLVHLADGSILKTK
                     VLIGCDGVNSMVAKWLGLATPVTIGRSAIRGLIDFPNGSGFDPMSYLYFEGGTRFGFR
                     PVDDTTVYWFCTFAPQVSSYEKELQENQVKMKQFVLSLVRKMPREAQDVVERTPLSNM
                     SYSILKIRLPWNVYFGNIVKHNVCVAGDALHPMTPDINQGGCSALEDAIVLGRSLGEA
                     FLSKSSETDNEIERIEKGLEKYGRERRWRSVGLISVAYCVGFIQQSRGKIMSYLRKIW
                     LSNYTSNALLKMSSYDYGDLCF"
     misc_feature    88..1146
                     /gene="LOC139841347"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion]; Region:
                     UbiH; COG0654"
                     /db_xref="CDD:440419"
ORIGIN      
        1 agcttatcat aatcataatc ataatcatac tcatacacat aattttagat ttcaaatatg
       61 caggattgta attgttatca caatcatgaa gatgtggata tagttattgt tggagctggt
      121 ttagctggtc tcaccacagc cctagccctt cacaggttgg gtttgaggag ccaggtttta
      181 gagtcatcag agagtttgcg aattaccgga tttgccctta cactatggac aaatgcttgg
      241 agagcgttag atgctgtagg aattggggat tcactcagac aaaaatcaac ccaaataaca
      301 ggtttcaaga tggcctcttc ggattcaggc cttttttcgc cagggcaacc acttgacaaa
      361 gatggaaaat tcgagggtta tgaaagccga tgtgttaggc gaaaagattt aatggaaaca
      421 ttagtgaacg agttacccca aggcaccatt agatactctt caaaggttgt gagcatcgat
      481 acagaagacc atttcaaatt ggtgcacctg gcagacgggt ctatactcaa aacaaaggtg
      541 ctgataggat gtgatggggt taattcgatg gtcgctaaat ggttgggtct tgcaacacca
      601 gtaactattg ggagatcagc tattcgcggt ttgattgact tcccaaatgg ctcaggtttt
      661 gatccaatgt cctatctgta ctttgaaggg ggcacacgct ttggatttcg tccagttgat
      721 gacacgacgg tatactggtt ttgcacgttt gcccctcaag tttcatccta cgaaaaggaa
      781 ttgcaagaaa accaagttaa aatgaaacag tttgtactga gcctagtccg caagatgcca
      841 cgagaagcgc aagatgtggt agaaagaacg ccgctaagca acatgtctta ttcgatattg
      901 aagataagat tgccttggaa tgtttacttt gggaacatag tgaaacacaa cgtttgtgta
      961 gcaggggacg cgcttcatcc tatgactccc gacataaacc aaggaggatg ttcggcctta
     1021 gaagatgcca tcgtgcttgg taggtccctc ggggaggcgt ttttgagtaa atcgagtgaa
     1081 acggataatg aaattgagag gattgaaaag ggtttggaga aatatggaag ggagaggaga
     1141 tggagaagtg ttggtctcat tagtgttgca tattgtgtgg ggtttataca acaaagtagg
     1201 gggaaaataa tgagttactt aaggaaaata tggttatcta attatacatc taatgctttg
     1261 ctaaagatgt ctagttatga ttatggtgat ctttgtttct aaattgaact gttttttagg
     1321 gacaagatag taatttcagt acttggccca cgacatgtta tgtaattctg ttggaaactt
     1381 attacttcat gattggcact tgcgtttttc gttatgatcg aatagattat g
//
LOCUS       XM_071831570            2367 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841348), mRNA.
ACCESSION   XM_071831570
VERSION     XM_071831570.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2367
                     /gene="LOC139841348"
                     /note="uncharacterized LOC139841348; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841348"
     CDS             1..2367
                     /gene="LOC139841348"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687671.1"
                     /db_xref="GeneID:139841348"
                     /translation="MGSGVVGKRTGVKFNIINVYDSHDVQSKQLFWDQLHNKILSDLN
                     EPWVVCGDFNKVRSEDERLNCQFIENRAKKFNEFINNTKLIDIPLGGRLFTRVSDDGI
                     KFSKLDRFLVNDSFHNLWSCLSVVALDRGNSDHCPIILKDDIKNFGPKPIKVFDDWLD
                     IEGIDQFINEVWIEDGGGGTRKDCLLRNKLKKTKRALKTKSSQKCGNLEGEIEVLKSI
                     ANALEQKLKMASSVRKKGSNGEFLKGCNASFVTLIPNKSDPVTLSDYCPISLIGSFYK
                     IIAKILSNRLRKVIPKLIGSEQSLFLKERYIFDGILIANESIEFLKNHKKQSLIFKVD
                     FEKAFDSLNWHFLLEVMSCMGLEDVDSLAIRMRCQSGKFPFIYLGLQIGSKMKKIGDW
                     SPVIEKFKKRLSEWKMRTLSFGGRLVLLKSVLNSLSLYYFTLFRAPPCVLKLLERNAI
                     ENCDVAFKNSFKKSIGDGKNTSFWKENWYGSNCFKEMFPRLYRLESNKDVMISDRIAK
                     VDVSVLSPATCGTVPGSFPATGHVSVPVPAATTGAGSSSSSGAAASICSQTHVQCSTN
                     ITGDGGPVSASSQPNVPAGRVVSKWDLANDGVFTVKKLSSLIDKHILGNPIGSKKTLR
                     NNLIPKKIEIFAWRTLKKRIPVRIELDIRGIDLHSVRCPVCDDDLESVDHFIVSCKFA
                     SDVWSRIYNWWKLGPCSCSNVDILEGNIAHASTSLGQKIWKAVVWVCAYYLWKNRNLK
                     VFHNESWCTPVLVSEIQVKSFEWITGRIKGKKIDWPNWLVNPHMFLNL"
     misc_feature    <31..423
                     /gene="LOC139841348"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(58..60,160..162,403..405)
                     /gene="LOC139841348"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    739..>1053
                     /gene="LOC139841348"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    1795..2055
                     /gene="LOC139841348"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggttcgg gtgttgtggg gaaacgcacg ggggttaaat ttaatatcat taatgtatat
       61 gactcgcatg atgttcaaag caagcagcta ttttgggatc aattacataa taaaattttg
      121 agtgatctca atgagccatg ggtagtatgc ggtgatttta acaaagttag atccgaagat
      181 gaacgactca attgccaatt tattgaaaac agagcgaaaa aattcaacga gttcatcaac
      241 aacactaagc ttattgatat tcctctaggt gggaggttgt tcacacgtgt tagtgatgat
      301 ggtatcaagt ttagcaagct tgatcgtttc ttagtaaatg atagttttca taacttgtgg
      361 agttgtcttt cggtggttgc tctcgatcgc ggtaattcgg atcattgtcc tattattctt
      421 aaagacgata ttaaaaattt tggtccaaaa ccaattaaag tgttcgatga ttggcttgat
      481 attgagggca ttgatcaatt cataaatgag gtttggatcg aagatggtgg tggggggact
      541 cgtaaagatt gtcttttaag aaacaagtta aagaagacca aacgcgcatt aaaaacaaaa
      601 agttctcaaa agtgtggcaa tttggagggt gaaattgaag tattgaaatc cattgcaaat
      661 gctcttgaac aaaagctgaa aatggcctcg tcagtgagga agaaaggaag caatggtgaa
      721 ttcttaaagg gatgcaatgc ctcctttgtt accttgattc caaataaaag tgatcccgtt
      781 actcttagtg attattgccc tattagtctc attggaagtt tttataagat cattgcaaaa
      841 atcctctcca atagactaag aaaagttatt ccaaagttaa ttggttcgga acaaagctta
      901 tttcttaaag aacgttatat ttttgatggt attttaatag ctaatgagtc tattgaattt
      961 ttgaaaaatc ataagaagca aagtttaatt ttcaaggtcg atttcgagaa agcctttgat
     1021 agtttaaatt ggcactttct tttggaggtt atgtcttgca tgggtttgga ggatgtagac
     1081 tcattggcta ttcgtatgag atgtcaatcc ggtaaattcc catttattta ccttggctta
     1141 caaattggat cgaagatgaa gaaaattggt gattggtctc cggtcataga aaaattcaaa
     1201 aaacgattat cggaatggaa aatgaggacg ttgtcctttg gtgggagatt agtccttctt
     1261 aaatcggtgc ttaatagtct ttcgttatac tacttcacgc tttttcgtgc cccgccttgt
     1321 gtgcttaaat tacttgagag aaatgccatt gaaaattgtg atgttgcttt caagaactcg
     1381 ttcaagaaat caattggaga tggcaagaac acttcatttt ggaaggaaaa ttggtatggc
     1441 tcaaattgtt ttaaagaaat gttcccgaga ttatataggc ttgaatcaaa taaagatgtc
     1501 atgataagtg accggattgc caaagttgat gtttcagtct tgtccccagc aacatgtggt
     1561 actgttccag gctcgtttcc agctacagga catgtttctg ttccagttcc agcagctaca
     1621 acaggtgcag gttcttcatc gtcatcaggt gctgcagcgt caatatgttc tcagacgcat
     1681 gttcaatgct cgaccaacat aacaggtgat ggtgggcccg tttcagcttc ttctcaacct
     1741 aatgttccag caggacgggt cgtctcaaaa tgggatctcg caaatgatgg ggttttcacg
     1801 gttaagaaat tgtcttctct cattgataaa catattcttg gaaatcctat tggttcgaaa
     1861 aaaacactac gaaataatct catccccaaa aagatcgaaa ttttcgcatg gagaacgttg
     1921 aaaaagagaa ttccggttcg gattgaactc gacataagag gcattgactt acatagtgtt
     1981 cggtgccccg tttgtgacga tgatcttgaa tcggtggatc atttcattgt ttcgtgtaag
     2041 tttgcttcag atgtttggtc tcgtatttat aattggtgga agcttggtcc ttgttcgtgc
     2101 tctaatgtcg atatccttga aggtaacata gcccatgcct caacttcgct tggtcaaaaa
     2161 atttggaaag ccgtggtttg ggtttgtgca tattacttgt ggaagaatcg caatttgaag
     2221 gtttttcata acgagtcgtg gtgtactccg gtcctagtga gtgaaattca agtgaaatct
     2281 ttcgaatgga ttacgggccg tattaaagga aagaaaatcg attggccaaa ttggcttgtt
     2341 aatcctcata tgttcctaaa tctttaa
//
LOCUS       XM_071831571            1158 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841349), mRNA.
ACCESSION   XM_071831571
VERSION     XM_071831571.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1158
                     /gene="LOC139841349"
                     /note="uncharacterized LOC139841349; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841349"
     CDS             1..1158
                     /gene="LOC139841349"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687672.1"
                     /db_xref="GeneID:139841349"
                     /translation="MKQKRQKKEIKNKEAFNAHELPHVKEKKPRKEKKVDCKWVVHIS
                     KFEGAQTWKVKTYHNKHNCLPARVNKNCTFTFLSKQILDQVTVNPKIPTKAIHHHLEL
                     TFELNISRMKAFRALDRVKKVIERELLGVDGAFMKQPATGQMLTAVGLECNNGLYPLA
                     YAIVEQENSSSWILWLCDARDKPIITALEYITEYLMKRIAKVVTHASKSDGPLTPTAT
                     KLFDLIMKEAHKCTVLWSSGNKYQVNGPHNNQVVVDLEERSCGCRKWEITNTWKQAYG
                     FTINPVNGRSLWTNSNVPNTLFPPKVVKSAGRPKNSKNIAMDEKDPIDNSGKLIRKGK
                     TVKCGKCGKYGHNKRRCGGEGNDGVNFEKKRKMPNEAITSGKKSKDILPKQ"
     misc_feature    382..>546
                     /gene="LOC139841349"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgaagcaaa aaagacaaaa aaaagaaata aaaaacaaag aagctttcaa tgcgcatgag
       61 ctaccacatg tgaaagagaa aaagccaaga aaagaaaaga aggttgactg taaatgggtg
      121 gttcatattt caaagtttga aggtgctcaa acatggaagg tgaaaacata tcataataaa
      181 cacaattgtt taccagctag ggttaacaaa aattgtactt tcacattcct ctcaaaacaa
      241 atacttgatc aagttacagt caatccaaag attcctacca aggctatcca ccatcattta
      301 gaattaactt ttgaactcaa catttcaagg atgaaagcct ttagagcact agacagggta
      361 aaaaaagtta ttgaaaggga attacttggt gttgatggag catttatgaa acaacctgca
      421 actggtcaaa tgttgactgc tgttggtctg gagtgcaata atggacttta cccattagct
      481 tatgctattg ttgaacaaga gaactcatct tcatggattt tgtggttatg tgatgctcga
      541 gataagccaa ttattactgc acttgagtat attacggagt acctaatgaa gaggattgca
      601 aaagttgtga cacatgcttc gaagtcagat ggacctctaa caccaactgc tacaaaactc
      661 tttgacttaa taatgaaaga agcccacaaa tgcactgttt tgtggagtag tggtaacaag
      721 tatcaagtga atggacctca taataaccag gtcgtagttg acttagagga gagatcttgt
      781 ggttgtagga aatgggaaat cacaaatact tggaagcagg cttatggttt taccattaat
      841 ccagtgaatg ggaggtcact atggactaat tcaaatgtcc ctaacacttt gtttccacca
      901 aaggttgtga agtctgctgg tagaccaaag aatagtaaga atatagcaat ggatgagaaa
      961 gatccgattg ataacagtgg aaaattaata aggaagggca aaacagttaa gtgtggcaaa
     1021 tgtggaaaat atggacataa caagagaagg tgtggaggtg aggggaatga tggtgttaac
     1081 ttcgagaaga aaagaaagat gcctaatgaa gctataacaa gtgggaagaa atcaaaagat
     1141 atattaccaa aacaataa
//
LOCUS       XM_071831572            1113 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841350), mRNA.
ACCESSION   XM_071831572
VERSION     XM_071831572.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1113
                     /gene="LOC139841350"
                     /note="uncharacterized LOC139841350; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841350"
     CDS             1..1113
                     /gene="LOC139841350"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687673.1"
                     /db_xref="GeneID:139841350"
                     /translation="MTIDKRWTTIRHTFNLDFIKGLNAFIERCKNNLNSHSKCSCPCK
                     HCGNKVFLKPKRIKAHITRYGFEPSYTIWRHHGELPQPPEVHNTTDPLRNFLHDIQLE
                     EVPNFEEEGPNDDETMNDTTATALDDLIDSTQTELYPGSKLSSLEFLAKLTHIKVLNK
                     WTNTSFDQLLELLIQSHPPNNMILKSFYETKKWTRKISLGYQAIHACKNDCCLFYKEY
                     QDLENCPLCNESRCKDERTTGKKVPNLVLRYFPITPRLKRLYSSRYTAKDMTWHATGQ
                     CNEEGKMRHPVDGRAWKEIDKRYPDFARENRNVRLGLAADGFNPFDNMNNPYSMWPVI
                     LTTYNTPPWICMKESSLMLTLLIPGPKSPGKDLMFT"
     misc_feature    13..234
                     /gene="LOC139841350"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    838..>1101
                     /gene="LOC139841350"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atgacgattg ataagaggtg gactactata cgacatacat ttaatcttga ctttattaaa
       61 ggtcttaatg catttattga gaggtgtaaa aacaatttga attcgcacag taagtgtagt
      121 tgcccatgta aacattgtgg taataaggtt tttcttaaac ctaaacgtat aaaagcccat
      181 ataactagat atgggtttga accctcttat accatatggc ggcatcacgg tgaactacca
      241 caaccacccg aagtacacaa cacaacggac cctctaagaa atttcttgca cgatattcag
      301 ttggaggaag ttcctaattt tgaggaggaa ggtccgaatg acgatgagac tatgaatgac
      361 acgaccgcaa ctgctcttga tgatttaatt gactctaccc aaaccgagct atatcccggt
      421 agcaagttgt cctcattaga gtttttagcc aagttaacac acattaaggt cttgaacaaa
      481 tggacgaata cttcattcga ccaattgtta gaattactca tacaatcaca tcccccaaat
      541 aacatgattc tgaaatcatt ttacgaaact aagaagtgga cgagaaagat cagtttaggg
      601 tatcaagcga tacatgcttg taagaatgat tgttgtttat tttataaaga ataccaggat
      661 ttggaaaact gtccattatg taatgagagt agatgtaaag atgaacgtac aacggggaaa
      721 aaagttccta atttagtttt gcgttatttt ccaataactc caagactaaa acgtttgtac
      781 agttccagat acactgcaaa ggatatgact tggcatgcta ctgggcagtg caatgaagag
      841 ggtaagatgc gtcatccggt agatggtcga gcttggaaag aaattgacaa aagatatccg
      901 gattttgcac gtgaaaacag aaacgttcga ctagggttgg ctgctgatgg tttcaatcca
      961 ttcgacaaca tgaataatcc ttacagcatg tggccagtca tattgacaac gtacaatacg
     1021 ccgccgtgga tatgtatgaa agaaagttct ctcatgttga ctctgttaat tcctggtcct
     1081 aaatcacctg gaaaagattt gatgtttact tga
//
LOCUS       XM_071831573            1305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841351), mRNA.
ACCESSION   XM_071831573
VERSION     XM_071831573.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1305
                     /gene="LOC139841351"
                     /note="uncharacterized LOC139841351; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841351"
     CDS             1..1305
                     /gene="LOC139841351"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687674.1"
                     /db_xref="GeneID:139841351"
                     /translation="MKAMLIWTINDYPAHSILFGWSGQGYKACPTCNEDTPAMRVKNK
                     IVFVSHRPNLESNHPYRESLEFNGKVDHTSKPRKFKVADIENQLTYLLPVGNPSKNHT
                     NVGEKRKRPPNCRHNWTKISIFRKLVYWKYLPLQHNLDVMHIEKNVLEAILDGFGSNF
                     RHKVNKENTNITNMKSHDCHIMMQRLLPVGINAFLDETISTPIMQLCAFFKQICAREL
                     MVADMLKAQKQLIKLLCILELIYPPAFFDIMIHLVMHLPEEAIYGGPVYMRWMYPIER
                     YMKKLKNYVYRRDLIVLTDMWTGQLGHVSFVCSTRYVNLSVKVCSNLWPGMFRINFTF
                     KAENPNMDMKTNFPSWFTNQIRKLRSVDGSKYSDELICLSEGPVGTTNHYSVCNVNGV
                     RFVVSNRDDRCTTQNNGIETLADAGARVSKYYGRLEDIVELH"
     misc_feature    <1..264
                     /gene="LOC139841351"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    637..>864
                     /gene="LOC139841351"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
ORIGIN      
        1 atgaaagcaa tgcttatttg gaccataaac gattatcctg cccatagtat tttgttcggt
       61 tggagtggcc aaggctataa agcatgccct acatgtaacg aggacactcc tgctatgcgt
      121 gtgaaaaaca aaattgtttt tgtcagtcac agaccgaacc ttgaatcaaa tcacccatac
      181 agagaaagct tagaattcaa tggtaaggtt gatcatacct ctaaacctag aaagttcaaa
      241 gtagctgata tcgaaaacca acttacatat ttgttgccag ttggtaatcc cagtaaaaat
      301 catacaaatg ttggtgaaaa aagaaaacgt ccccctaatt gtcgtcacaa ctggactaaa
      361 atttctattt ttcgaaaact tgtgtattgg aaatatcttc cactgcaaca caacttggat
      421 gtcatgcata ttgaaaagaa tgtgttggag gctattttgg atgggtttgg atcaaacttc
      481 aggcacaaag tgaacaagga aaataccaac attacgaaca tgaaatctca tgattgccat
      541 atcatgatgc aacgattatt accggtcgga attaacgcgt ttttggacga aaccatctct
      601 acaccaataa tgcagctatg cgcattcttt aagcaaattt gtgctcgaga gttaatggtg
      661 gcagacatgt tgaaagctca aaaacaattg attaaactgt tatgtattct cgagttaatt
      721 taccctcctg ctttttttga cataatgatt catttggtga tgcatttacc agaagaggct
      781 atatatggag ggcctgttta catgaggtgg atgtatccaa ttgagagata catgaaaaaa
      841 ctcaaaaatt atgtatacag acgagattta atcgtcctga cagatatgtg gacgggccaa
      901 ttaggtcatg taagtttcgt gtgttcaact cgttatgtaa atttatcagt aaaggtgtgt
      961 tcgaatctct ggcccgggat gttcaggata aacttcactt ttaaagcaga gaaccccaat
     1021 atggacatga aaacaaattt tcctagttgg ttcaccaacc agatacgtaa actacggtca
     1081 gttgacggat cgaagtatag cgatgaattg atctgtctat ctgaaggacc ggtgggtacc
     1141 acaaaccatt acagtgtctg caatgtgaat ggtgtcaggt ttgtggttag caatcgcgat
     1201 gatcgatgca caacacaaaa taatggaatt gaaacactcg cagatgccgg tgctcgtgtc
     1261 tctaagtatt atggtcggtt ggaagatatt gttgagttgc attaa
//
LOCUS       XM_071831574             915 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841352), mRNA.
ACCESSION   XM_071831574
VERSION     XM_071831574.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..915
                     /gene="LOC139841352"
                     /note="uncharacterized LOC139841352; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841352"
     CDS             1..915
                     /gene="LOC139841352"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687675.1"
                     /db_xref="GeneID:139841352"
                     /translation="MYFHLYGPEYLRRPTAQDVQRLTTKHAQIHGFPGMLGSIDCMHW
                     RWRNCPARWKGHYTRGDHGYPSIMLEAVASYDGWFWHAFFGTAGSNNDINVLNQSDLF
                     SELLAGEAPPCTYTVNGCTFAKGYYLADGIYPEWSTIVKSFKNPIDPKQKKFKRYQES
                     ARKDIERAFGILQGRLQIVQRPARPYYIRKIRRILLSCVILNNMIIEDNGRSFCGLEE
                     NYRPVRRAPRSFQERVEAHMRVDAEIRDEGIHQLLKHMLVEHIHNLPPNYRIRHDPTR
                     NPNNQDDAGPSHIPDDEDEEDQEDDDEE"
     misc_feature    25..630
                     /gene="LOC139841352"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtatttcc acttgtacgg tcccgaatat ttgagaagac caactgcaca agatgtgcaa
       61 cgtttgacca ctaaacatgc tcaaatacat ggttttccgg ggatgttagg aagtattgat
      121 tgtatgcatt ggagatggag aaattgtccg gcacgttgga agggtcatta tacacgaggt
      181 gaccatggtt acccttcaat tatgcttgaa gcggtagcat cgtatgatgg atggttttgg
      241 cacgcgtttt ttggaactgc cggatcaaac aatgatatca acgtactaaa tcaatccgat
      301 ttgtttagtg agttattagc cggtgaagca ccaccatgta cgtatacggt taacggatgt
      361 acgtttgcca agggttatta tttggcggat ggaatttacc cggaatggtc tacaatagtt
      421 aagtcattca aaaatccgat agacccgaaa caaaaaaaat tcaaaaggta tcaagaatcg
      481 gcaagaaaag atattgaacg agcatttgga atactacaag gccgattgca gattgttcaa
      541 cgtccggcac gaccgtatta tatccgcaaa attagaagga ttttgttatc atgtgtgata
      601 ttaaataata tgataatcga ggacaacggc cgttcatttt gtggactcga ggagaattat
      661 cgtccggttc gacgagcacc gagatcattc caagaaaggg ttgaagcgca tatgcgagtg
      721 gacgcggaaa taagagatga gggcattcat caactattaa aacatatgct tgtagaacac
      781 atacataatc ttccaccaaa ttatcgcata cgacatgatc ccacaagaaa tccaaacaac
      841 caagatgatg ccggaccttc acacattccc gatgacgagg atgaagaaga tcaagaagac
      901 gacgatgaag aatag
//
LOCUS       XM_071831575            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841353), mRNA.
ACCESSION   XM_071831575
VERSION     XM_071831575.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139841353"
                     /note="uncharacterized LOC139841353; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841353"
     CDS             1..1116
                     /gene="LOC139841353"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687676.1"
                     /db_xref="GeneID:139841353"
                     /translation="MAQNKTPSTSAVETKTYVFLSELELGKQSQVQPNADASTFTRHP
                     FNCIQIEDLQPTLGKFVVDPLWESARAILEFDLGNERGNTIRTTLWGDLGDSFLKRQP
                     AAPAYYYIILTSVSVKKGFNGILSLSSTSTTLIIDNAEVPTLIDFKERMSGIELPIAV
                     EPFAPGWQLPPPKDGTLRELLDMARKVKKKFVCKARKGFDRRFGQHWCESCNDNVPEP
                     ITRFRVICDVRDDIATMVMVLFDETAEAVTQTTAKALLAEVNAETCNTVLPNALTNLV
                     GTTRVVLLKATSYYDQGTYESFNCIKVYAPDSDPTNHPLPPTSKPTIPTKSSPSTVTL
                     APASSTPKGFVVTSDSDDESAIGEEDQNVNESVSPKN"
     misc_feature    <64..765
                     /gene="LOC139841353"
                     /note="replication factor-a protein 1 (rpa1); Region:
                     rpa1; TIGR00617"
                     /db_xref="CDD:273177"
     misc_feature    <577..921
                     /gene="LOC139841353"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(673..684,688..690,706..714,718..720,832..834,
                     853..861,889..897)
                     /gene="LOC139841353"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(835..837,841..843,847..849,910..912)
                     /gene="LOC139841353"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggctcaga acaagacacc atccacatct gctgttgaaa ccaaaacata tgtgtttctg
       61 agtgagcttg aattagggaa gcaatcccag gtgcagccaa atgctgatgc aagcacattc
      121 acccgacatc ccttcaactg tattcaaatc gaagacttgc aacctacttt gggaaaattt
      181 gttgtagacc ccctgtggga atctgccaga gcaatcctag agtttgacct gggaaatgaa
      241 cggggtaaca cgataaggac gacactatgg ggcgacttag gtgactcttt ccttaaaaga
      301 caacctgcag cccccgccta ttactacatc atcttgactt ctgtgtcggt gaaaaagggg
      361 ttcaacggta tcctctcact ctctagcacg tcaacaacgc ttattatcga caacgctgag
      421 gtccctaccc ttatcgactt caaggaaaga atgagtggca ttgaattgcc catagctgtc
      481 gagccttttg ctcctggttg gcaactcccg ccgccaaagg atggaactct tcgcgagctc
      541 ctggatatgg cgcgtaaagt gaaaaaaaaa ttcgtctgca aagcgaggaa gggatttgat
      601 aggaggtttg gccaacattg gtgcgaatcc tgtaatgaca acgtccccga accaatcacc
      661 aggttccgcg tcatatgcga tgtcagagac gatatagcca caatggtcat ggtcctcttt
      721 gatgagactg ctgaggctgt aacccaaacc actgcaaagg ctctgttagc tgaggtcaat
      781 gcggaaacct gtaacaccgt cttgcctaat gcactcacta acttggtagg caccacaaga
      841 gtggtcctgt tgaaagcaac gtcctactat gatcaaggca catatgagag tttcaactgt
      901 ataaaagtat atgcaccaga ctctgatcca acgaaccacc cccttccacc tacttcgaaa
      961 ccaactatac ctactaagtc ctctccatcg acagtcaccc ttgctccggc gtcctcgacc
     1021 cccaaagggt ttgtggttac aagcgactca gatgatgaaa gtgctattgg agaagaggac
     1081 cagaatgtga atgagagtgt gtcgcccaaa aattag
//
LOCUS       XM_071831576            3039 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841354), mRNA.
ACCESSION   XM_071831576
VERSION     XM_071831576.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3039
                     /gene="LOC139841354"
                     /note="uncharacterized LOC139841354; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139841354"
     CDS             1..3039
                     /gene="LOC139841354"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687677.1"
                     /db_xref="GeneID:139841354"
                     /translation="MALQYSLLFPYGETGYHEEIPYHSNSGRRQTNRDHVTMREFYCY
                     RIQQCESEATTILRGGQLFQQYLVDAYTAVEEQRLKWLRHHQNELRIDLYNNVCDVVT
                     RGDTSAASIGKRIILPSSHTGSPRYMVQNYQDVMALCREYDNPDLFITFTSNPRWPEI
                     DTMLCYIEGQRSTDRPEIVARVFKQKLDGLMTDIMKNQIFETNQADIYIIEFQKRGLP
                     HVHNLIWLTSAHKCRVPSDIDDLISAEIPSHINDSEGFRAVTEYMLHGPCGGTHTDAP
                     CIIDKQCSKHFPKPYYAEKTIDGEGYANYRRRNNGIKFKKNNTPLDNSFVVPYNQYLL
                     LKYNTHINVEWCNRSWAIKYLFKYLNKGPDRATIVIQENMVPSGGGTRVEDIFKVDEI
                     KNYLDCRYLSPCEAVCRLFSYDIHYSKPSVIKLSFHLPNQQSITLRDSQKLPALLKRE
                     SIKETMFTQWFELNKHDDFARTLTYAKLPKHYVWNQDAKMWTPRKLRTSIGRIVFLHP
                     TFKDACFAYGLALSDDTLRKKRKLFNFPDLILIDAQLKNYCLVEIQGILNKNGKSLDD
                     YPDLPQPDPSMLTQMDNRLIREELNYNIKDMHILHETLFSSLNPEQLAIHYQVMKKGG
                     LFFLYGPRGTGKTFLYTAVLAKLRAERMIVLAVASSGIFVFLFFGIASLLLPGGRTAH
                     SRFVIPLELMENSTCGIKQKTHLATLIQEVRLIIWDKAPMTQRFAFEALDKTLRDILG
                     AKDDANRSKLFGGMPILLGGDFRQILPVIPKGKRQDIIQACINRSDLWQYCQLHTLSR
                     IMRVNEYNSDGHHDTRKHAFNKWVLDVGEGKVQARRKDGEDEPTWIKIPDEYIVRSEK
                     SRIETIVDTIFPDYTVRQEDEEYLRERAILTPRNDDADQINKHMFKKLNGATMTFKSS
                     DEICKGSTDNIEQHHAYPINIWENKSAARPVSNPVVTCGSVTYSGLPSNFVSHPFLYV
                     QVALRLLSRYASQQQLASAMDPAVQKLHGNSNKSTSSPAL"
     misc_feature    124..672
                     /gene="LOC139841354"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    1822..2772
                     /gene="LOC139841354"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(1894..1914,2152..2154)
                     /gene="LOC139841354"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atggcactgc agtactcgtt actgtttccc tatggagaaa ccggctatca tgaagaaatc
       61 ccataccaca gtaatagtgg aaggcgacaa acaaaccgcg atcacgttac catgagagaa
      121 ttctattgtt atcgaatcca acaatgtgaa agtgaggcca ccactatcct taggggtgga
      181 caattattcc aacagtactt ggtggatgct tatacggctg tagaagaaca acggttaaag
      241 tggctgcggc accaccaaaa cgagctacgc attgacctat acaataatgt ctgtgatgta
      301 gtaaccaggg gcgacacatc ggctgcttct attggaaagc gcataatttt accgtcatcc
      361 cacacaggta gcccccgtta tatggtgcaa aactatcaag acgtgatggc tttgtgtcgg
      421 gaatacgaca acccagattt attcatcact tttacatcta accctagatg gcctgaaatc
      481 gacactatgc tctgctatat tgagggtcag cgatcaacgg accgcccaga aattgtagct
      541 agggttttca agcaaaaact agatggcttg atgactgata taatgaagaa ccaaatcttc
      601 gaaacaaacc aagcagatat atacatcatc gaatttcaaa aacgcggatt gcctcacgtg
      661 cataacttaa tatggttaac atctgctcac aagtgcagag taccgtctga cattgatgac
      721 cttatatcag cagaaatacc atcacatata aatgattccg aagggtttag ggctgtaacc
      781 gaatacatgt tacatgggcc ttgcggtgga acgcacacgg atgcaccttg cattattgac
      841 aaacagtgtt ctaaacattt cccgaaacca tactacgcag aaaaaacaat tgacggagaa
      901 ggatatgcta actataggcg ccgaaacaac gggatcaaat ttaaaaagaa caacacccca
      961 ctagataaca gttttgtggt tccatacaac caatacctac ttctaaaata caatacacat
     1021 ataaatgtag agtggtgtaa tagatcttgg gcaatcaaat atttatttaa atacttgaac
     1081 aagggcccgg accgcgcaac aattgtcata caagaaaaca tggtacccag cggtgggggt
     1141 actcgagtag aagacatatt taaggttgac gagataaaga attatttgga ttgtcgttat
     1201 ttatcgccat gtgaggccgt ttgcaggttg ttttcatacg acatccacta ctcgaaaccg
     1261 tcggtcataa aattgtcgtt tcacctgccg aatcagcaat cgatcacact ccgtgattca
     1321 caaaaactcc cggccctatt aaaaagggaa agtattaagg aaacaatgtt cacgcagtgg
     1381 tttgagctta acaaacatga tgactttgcc cgaacactta cgtacgccaa actccctaaa
     1441 cattacgtat ggaatcagga tgccaaaatg tggaccccga gaaagcttag aaccagcatt
     1501 ggtcgtatag ttttcttaca cccaaccttt aaggacgctt gctttgcata tggtttggcg
     1561 ttatcggacg acactcttcg taagaaaaga aaattattca acttccctga tctaatcctc
     1621 atcgacgcac aacttaagaa ttattgcttg gtcgaaatac agggcatatt aaataaaaat
     1681 ggaaaatcat tagatgatta ccctgacctc ccacaacccg acccatctat gcttacgcaa
     1741 atggacaacc ggctgattcg agaagagtta aactacaaca taaaagacat gcatatttta
     1801 catgaaaccc tcttcagttc tctcaaccca gaacaacttg ctattcatta ccaggttatg
     1861 aaaaaaggag ggcttttctt cttatatggt ccacgtggca ctggcaagac attcctatat
     1921 accgctgtac ttgcaaaatt acgagctgaa agaatgattg tccttgcggt cgcatcatcg
     1981 ggtatatttg tatttctctt tttcggtatc gcttcccttc tgttaccagg cggccgaaca
     2041 gcccatagtc gcttcgtgat ccctctcgaa ttgatggaaa atagtacgtg tggtataaaa
     2101 caaaaaacac acctggcaac ccttattcag gaagtcagat taatcatctg ggataaagcc
     2161 ccaatgactc aaaggtttgc tttcgaggca ttagacaaaa ccttgcgcga cattttgggc
     2221 gctaaggacg atgcaaacag gtcgaagcta tttgggggta tgcctatcct attaggggga
     2281 gacttccggc aaatcttacc cgtgatacca aaaggcaaga gacaagacat tattcaggca
     2341 tgcatcaata gatcggatct atggcaatac tgtcagctgc ataccctttc ccgcatcatg
     2401 cgcgtcaacg aatacaattc tgatggtcac catgataccc gaaaacacgc cttcaataaa
     2461 tgggtgctgg atgtaggaga aggtaaagtt caagcaaggc gtaaagatgg agaggacgaa
     2521 ccaacgtgga taaagattcc cgatgaatac attgtcagat ccgaaaaatc acgcattgaa
     2581 accattgttg acacaatatt cccagattac actgtaagac aagaagatga agaatatttg
     2641 cgtgaacgcg caatcttgac accccgaaat gatgacgctg accagattaa caaacacatg
     2701 ttcaagaaac tcaacggtgc aacaatgaca tttaaaagct ctgacgagat ttgcaagggt
     2761 tcaacagata acatcgagca acaccacgcc tacccgataa atatttggga gaataaaagt
     2821 gctgctagac ctgtgtctaa ccctgtggtg acctgtggct cggttactta ctctgggtta
     2881 ccaagtaatt ttgtttccca tccctttctt tatgttcagg ttgcattaag gctgttgtca
     2941 aggtatgctt cacagcagca gcttgcatca gctatggacc ctgctgtaca gaaattgcat
     3001 gggaactcca acaaatctac tagttcaccg gcactttag
//
LOCUS       XM_071831577            1080 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139841355), mRNA.
ACCESSION   XM_071831577
VERSION     XM_071831577.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1080
                     /gene="LOC139841355"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 29 Proteins"
                     /db_xref="GeneID:139841355"
     CDS             1..1080
                     /gene="LOC139841355"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071687678.1"
                     /db_xref="GeneID:139841355"
                     /translation="MASTITEFSHLHIPLEDVLEATNYFDGKNVIGRGGLGKVYKGKL
                     LRSGKWVNIAARRLDSNHKQRIEFMTEISVLSTLKHENIVSNIGFCDEKGEKVIINKH
                     EANRSLVMYLSNPTLSWVQRLKICVGVARALSYIHYVEGRSYSVIHRNINSSTILLDK
                     KFEPKLSGFEYSINHSVQRMDHVLFSEAIGTTGYMDPAIEKTRGVTHKSDIYSFGVVL
                     WEVLCGRKAFIPNGNDMFLAPLARFHYVDGGVNAIMLSSLLNNQMSLESLETFTSAAY
                     ACLSDERAERPDMKYIVNELEKALELQLPYETFFEKAGNRGVKIDMLGWEPELTELTE
                     RQSEEALVTNVTESEGGVREGTNQL"
     misc_feature    91..894
                     /gene="LOC139841355"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(91..102,109..111,115..117,160..162,166..168,
                     250..252,298..309,448..450,460..465,469..471,499..504)
                     /gene="LOC139841355"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggcatcta caattacaga gtttagtcac ttacatatcc cacttgaaga cgtcctagaa
       61 gccaccaact actttgatgg taaaaatgtc atcggccgtg gtgggttagg aaaggtttat
      121 aaaggaaagc tcttgcggtc tgggaagtgg gtgaatattg ctgcacggag attagatagt
      181 aatcataagc aaagaatcga gttcatgaca gaaatttctg tgctttctac tctaaagcat
      241 gaaaatatag tctctaatat cgggttttgt gatgaaaaag gtgagaaggt gatcataaac
      301 aagcatgagg ccaatagaag tctcgtgatg tatctaagca atccaaccct ctcatgggtt
      361 caaagattga agatatgtgt tggtgttgcg cgtgcattaa gttacatcca ttatgtggaa
      421 ggacggagtt actcagtgat acatcgtaac attaatagct ccacaatact tttagataaa
      481 aaatttgaac caaagttatc tggttttgaa tattcaatca accattcagt acaacgaatg
      541 gatcacgttc tcttttcaga agctattggc acaacagggt atatggaccc agcaattgaa
      601 aagactcgag gggtgactca caagtcagac atctactcgt ttggtgttgt tttatgggaa
      661 gtgttatgcg ggaggaaagc ctttattcca aatgggaatg atatgtttct agctccacta
      721 gccagatttc actatgtaga cggtggagta aatgctataa tgctatcttc cctactaaat
      781 aatcaaatgt ccctggaatc actcgagacc ttcacatctg cagcatatgc ttgcttaagt
      841 gatgagcgag cagaacgtcc ggatatgaag tatattgtta acgaacttga gaaagcattg
      901 gaactgcagc tgccatatga aacttttttt gaaaaagcag gtaatagagg tgttaaaatt
      961 gacatgttgg gttgggagcc tgaattaacg gagttaacgg agcgtcagtc agaagaagcg
     1021 ttagtcacta atgtgactga aagtgaagga ggcgtgaggg agggaaccaa ccaattatga
//
LOCUS       XM_071831578             414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841356), mRNA.
ACCESSION   XM_071831578
VERSION     XM_071831578.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..414
                     /gene="LOC139841356"
                     /note="uncharacterized LOC139841356; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841356"
     CDS             1..414
                     /gene="LOC139841356"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687679.1"
                     /db_xref="GeneID:139841356"
                     /translation="MKDWDVVDVNSLLCSLCKLQHDSHNHLFFECKFSLEVWERVKRL
                     IDFPSIGNKWKEIVQQFVPVAKRKVARVIVAKIVFAATVYFVWQEHNARLFRGESRNL
                     TQVFNIIFGTVRLKLMSVKFKESPHVHKLKMAWKI"
     misc_feature    <28..111
                     /gene="LOC139841356"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaaggact gggatgtagt agatgtgaat tcgttgcttt gctcgttatg taagttacaa
       61 catgattctc ataaccatct attttttgaa tgcaaatttt cattggaggt ctgggaaagg
      121 gtgaagcggc tcattgattt tccgagtatt gggaacaaat ggaaagagat tgttcaacag
      181 tttgtgccgg ttgccaaaag gaaagtggct cgagtcatag ttgccaaaat tgtgttcgca
      241 gcaacggtat attttgtatg gcaagaacat aatgcaaggt tgtttcgagg ggaatcacga
      301 aatttaaccc aggttttcaa catcatcttt ggaactgtga gattaaagtt gatgtcggtg
      361 aagtttaaag agtctcctca cgtgcacaag ttgaagatgg cttggaaaat ataa
//
LOCUS       XM_071831579            1968 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841357), mRNA.
ACCESSION   XM_071831579
VERSION     XM_071831579.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1968
                     /gene="LOC139841357"
                     /note="uncharacterized LOC139841357; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139841357"
     CDS             1..1968
                     /gene="LOC139841357"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687680.1"
                     /db_xref="GeneID:139841357"
                     /translation="MCKVVKKLRALKKPIRKLMWNKGNLHANVIQLRSELDTIQLQLD
                     SNLFSSEIRDLEIKKLKEYSDALWDEERFLKQKAKIEWLRVGDSNSNYFHKVVKARNN
                     RLRINAVTNSEGVLVEGNEVVEVFVSHYMDFLGDSKQCMRIVTTDLFQSKITHEMALD
                     MIKVVSDDEIKDAMFNIGDDKESGPDGYTSTFFKKACNIVGNEVCMAVKDFFLNGQLL
                     TEINHTILTLLPKVESPSKVNDYRPISFCNVIYKCISKIITSRITSALDAIISSNQSA
                     FVPGRRIMDNILITQEIMKNYHLNRDGFMYHPKCERQEIVNVCFADDLFIFARANREL
                     IQTIATALDEFKKCSGASKCLGVPLISTRLYQKDFKGLIDSMRMKIDDWKNKFLSFTR
                     RVQLIKSVLSSMQVYWSSVFILPDSVIKDMEKIMRGFLWCQGEMKKGKSKVKWSGVCL
                     PKEEGGLGIKSLKTWNIALMAYHIWSIITHKKSLWVKWIHTYRLNHRNFWVVDTVASS
                     SWAWWKILSIREDIRHLFVHVVGNGDDTSAWYDTWTDFGPLADVISSRDMHSANLHDR
                     SKVSDFLDHMGWNWPTQWTIKFPMLLNVPIPNRDESDKLFWKTHDGSLVEFSTKQAWE
                     SIHPHASKVWFGLLMRSRVIPLLLGYLLKRS"
     misc_feature    667..1062
                     /gene="LOC139841357"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtgcaagg tggtaaaaaa gttgagggct cttaaaaaac caattcgtaa attgatgtgg
       61 aacaaaggta atttacatgc taatgttatt cagttaagaa gcgagctgga cacgatccag
      121 ttgcaactgg attcaaacct gttctcaagc gaaattcgtg atttggagat caaaaaactt
      181 aaggaatata gtgatgcttt atgggacgaa gagagattcc ttaaacaaaa ggcgaaaata
      241 gaatggcttc gggtcgggga tagtaattca aattactttc acaaggttgt aaaggccaga
      301 aataatagat tgagaattaa tgccgtgacc aatagtgagg gtgtgctcgt ggaaggtaat
      361 gaggttgtag aagtttttgt ttcccattat atggattttc ttggtgatag taagcaatgc
      421 atgagaattg tgactactga tctttttcaa tccaaaatca cgcatgagat ggcattggat
      481 atgatcaaag tagtgtcgga tgatgagata aaagatgcca tgtttaatat tggggatgat
      541 aaggagtcgg gtccagatgg atatacgtct acatttttca aaaaagcatg caacattgtt
      601 ggtaatgagg tctgtatggc ggttaaagat tttttcttga atggtcagtt gcttacggag
      661 ataaatcata cgattttgac tcttttaccg aaagtggaat cgccgtcaaa ggtgaatgat
      721 tatcgcccga tctcgttttg taatgtgatc tacaagtgca ttagcaaaat tatcacgagt
      781 aggattacta gtgctttgga tgctattatt agtagtaacc aatccgcgtt tgttccgggg
      841 agacgaatta tggataatat attgattact caggaaatta tgaagaatta tcacttgaat
      901 agagatggtt ttatgtatca cccgaaatgt gagaggcaag agattgtcaa tgtatgtttc
      961 gcggacgact tattcatctt tgctcgggct aacagggaat tgattcagac cattgccaca
     1021 gctcttgatg aatttaagaa gtgttccgga gcgagtaagt gtttgggtgt ccctttgatt
     1081 tctactcgcc tatatcaaaa agatttcaag gggttgattg atagtatgcg tatgaagata
     1141 gatgattgga aaaacaaatt tttgtctttt acaaggcgtg tacaacttat caagtctgtt
     1201 ctgtcatcta tgcaagtata ttggtcctcg gtgttcattc ttcccgatag tgtcattaaa
     1261 gatatggaaa aaattatgcg tggtttttta tggtgtcaag gtgaaatgaa gaaaggaaaa
     1321 tccaaagtga aatggtcggg ggtgtgttta cctaaagagg aaggcggatt ggggattaaa
     1381 agtcttaaaa cgtggaatat tgcgttaatg gcttatcata tatggagcat cattactcat
     1441 aaaaagtcat tatgggtaaa atggatccat acctataggt tgaatcatcg aaacttttgg
     1501 gtggttgata ccgttgcttc atctagttgg gcatggtgga agattctaag cattcgtgaa
     1561 gacattcgtc atttattcgt gcatgtggta ggaaatggtg atgacacgtc tgcatggtat
     1621 gatacttgga cggacttcgg tcctctagct gatgttattt cctccaggga tatgcatagc
     1681 gctaatttac atgacagatc caaggtgtcg gattttcttg atcatatggg ctggaattgg
     1741 cctactcaat ggaccataaa attccctatg ttactaaatg ttccgattcc taacagagat
     1801 gagagtgata aattattttg gaagacacat gatggaagcc tagtagagtt ctctactaaa
     1861 caagcatggg aatctatcca tccacatgcg tcaaaagttt ggtttggttt gctaatgcga
     1921 tcccgcgtca ttcctttatt acttggttac ttgttaaaga gaagctaa
//
LOCUS       XM_071831580             963 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calmodulin-binding
            receptor-like cytoplasmic kinase 2 (LOC139841358), mRNA.
ACCESSION   XM_071831580
VERSION     XM_071831580.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..963
                     /gene="LOC139841358"
                     /note="calmodulin-binding receptor-like cytoplasmic kinase
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139841358"
     CDS             1..963
                     /gene="LOC139841358"
                     /codon_start=1
                     /product="calmodulin-binding receptor-like cytoplasmic
                     kinase 2"
                     /protein_id="XP_071687681.1"
                     /db_xref="GeneID:139841358"
                     /translation="MSQRNNLEHLKFQHSDLKIKLTDIMSATDNFSATNHIGGSETIL
                     VVEHASNGYLNDYLFNIKEKPFLTWAKRLKICLDIAHALKYLHHEMENQKTVINCDIR
                     SGTISLDENWRARIVDFGFSVFLPPNLDGDALHLNCILGHECYIDPEYDETGKLKRES
                     DVYSFGVVLFKILCGRVDNDPTYIKESDIGLAFVVRRCFYDETPMEMNQMIDPLIKDE
                     CANGYSLDIFMKVAYQCLAKNQEQRPNMEVIIKELEKALSFQEEHVQCLETDQVVDEF
                     GKSLLRHENPTLKENAVVNLCWDNSELVFTPNTEYVINISVGFK"
     misc_feature    <106..765
                     /gene="LOC139841358"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgtcacaga gaaacaactt ggagcacttg aaatttcaac atagtgactt gaagattaaa
       61 ctcactgaca taatgtcggc cactgataac ttttccgcaa caaatcacat cgggggttct
      121 gagacgattc tagttgttga gcatgcttct aacggatacc ttaatgatta tttgtttaac
      181 atcaaagaga agccttttct tacttgggca aaacgtttga aaatatgtct tgatattgca
      241 catgcattga aataccttca ccatgagatg gaaaatcaaa agacggttat aaactgtgat
      301 ataaggagcg gcacaatcag tttagatgag aattggcggg cgaggattgt cgactttgga
      361 ttctctgtat tccttcctcc taatcttgat ggtgatgctc tccatctcaa ttgtatcctt
      421 ggccacgaat gttatattga tccagaatat gatgagacgg gtaagttgaa acgagaatcg
      481 gatgtatata gttttggagt agttttgttc aaaatacttt gtgggagggt agataatgac
      541 cctacttata ttaaggagag tgatataggg ctggcatttg ttgtacggcg atgcttctat
      601 gatgaaacac caatggaaat gaatcaaatg atagatcctt tgattaagga tgaatgtgcc
      661 aacggatatt ctttagacat attcatgaaa gttgcatatc aatgtcttgc aaaaaatcaa
      721 gaacaacgtc cgaacatgga agtcatcatc aaagagcttg agaaagcatt atcgtttcaa
      781 gaggagcatg tacaatgcct ggaaaccgac caagttgtcg atgaatttgg gaaatcattg
      841 ctaagacatg aaaatcctac gttaaaggaa aatgcagttg taaatctttg ttgggataac
      901 agcgagttag ttttcacacc aaatactgag tatgtgataa atatatcggt aggttttaag
      961 tag
//
LOCUS       XM_071831581            1110 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At2g23200 (LOC139841359), mRNA.
ACCESSION   XM_071831581
VERSION     XM_071831581.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139841359"
                     /note="probable receptor-like protein kinase At2g23200;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 14 Proteins"
                     /db_xref="GeneID:139841359"
     CDS             1..1110
                     /gene="LOC139841359"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At2g23200"
                     /protein_id="XP_071687682.1"
                     /db_xref="GeneID:139841359"
                     /translation="MLQENISSHLSIRKSDILWATKNFSMEYHIGIEGYYNLYNAQLE
                     HFHQVTFSSVEEKNKSEPTKRVTNVLIKCIFYRGERSKRVFVRDAEVFTTCKHRNIVT
                     LLGLCDEGTEMILVFEYPSNGNLYDYLINIKESPILTWTQRLRICLDIAYGLKYLHYE
                     MENGKVIIHGDLKSKCIGLDENWGAKIVQFGLCEYLRPKDEDVVHFKNSFGANSYRDP
                     EFVTTRNLKRESDVYSLGVVMFEILCGRTADDHIYKKGSDTGLASVARRCFHEGRIQE
                     IIDPIVTNDIGENKFSLNRGPSKKSLAAFLDIAYRCLTEIQNQRPTIKVVVDELEKAL
                     YFQVSSHSKNLKPFFSSYFYYWWYLLLSTVVSLGF"
     misc_feature    199..996
                     /gene="LOC139841359"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgttgcagg aaaatatctc ttcgcaccta agtattcgaa agagtgatat attatgggcg
       61 accaaaaact tttctatgga atatcatatt gggattgaag gatactacaa cttgtacaac
      121 gcacaacttg agcattttca tcaagtaaca ttttcctcag tagaagagaa gaataaaagt
      181 gaaccaacta agagagtcac taatgtatta ataaaatgta ttttctatag aggtgagcga
      241 tcaaaaagag tatttgtaag agatgcggaa gtatttacaa cttgtaagca tcgcaacatt
      301 gtcactctac ttggattgtg tgacgaaggc accgaaatga tcctcgtttt tgagtatcct
      361 tcaaatggaa atctttatga ttatttgata aacatcaaag aaagccctat tcttacttgg
      421 acccaacgat tgagaatatg tcttgatatt gcgtatggat tgaagtacct tcactatgag
      481 atggaaaacg gaaaggtgat tatacatggt gatttaaaga gcaaatgcat tggtttggat
      541 gagaattggg gggccaagat tgttcaattt ggtctctgtg aataccttcg tccgaaagat
      601 gaggatgttg ttcatttcaa aaattctttt ggcgctaata gttacaggga tccagaattt
      661 gttacgacga gaaatttaaa acgagaatca gatgtataca gcttaggagt agttatgttc
      721 gagattctgt gtgggcggac agccgatgat cacatttaca aaaaggggag tgacactggg
      781 ctggcatctg tggcaagaag atgcttccat gaaggaagga tacaagaaat tatagatcct
      841 atagttacga atgacatcgg tgagaacaaa ttttccctta atagaggacc tagcaagaag
      901 tctctcgctg catttttgga tattgcttac aggtgtttga cagaaattca aaatcaacgc
      961 cctacaataa aagtcgttgt agatgaactg gagaaagcct tatattttca agtaagttca
     1021 cattctaaaa acttgaagcc atttttctca tcatatttct attactggtg gtatttatta
     1081 cttagtacag tcgtatcctt aggtttctag
//
LOCUS       XM_071831582             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL22 (LOC139841360), mRNA.
ACCESSION   XM_071831582
VERSION     XM_071831582.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139841360"
                     /note="probable serine/threonine-protein kinase PBL22;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139841360"
     CDS             1..606
                     /gene="LOC139841360"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL22"
                     /protein_id="XP_071687683.1"
                     /db_xref="GeneID:139841360"
                     /translation="MDSPTHRIPVTEGTQSSSGAFSLSFPPENDTIQVNNHLSISITN
                     QENNDDNLKITFKDLKLATENFHVSNCVGGGGFGNVYKGKLPQSDHMIVAKKLDTQGG
                     QGEQQFRNELQILFKYKHENIIGLVGYCDEENEKIIVYLYEPRGSLDRYLSDARLNWI
                     KRLNICIEVATALDFLHRGIGKQATVIHRDIKTANIMLTSD"
     misc_feature    214..>603
                     /gene="LOC139841360"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(214..225,232..234,238..240,277..279,283..285,
                     370..372,418..429,568..570,580..585,589..591)
                     /gene="LOC139841360"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggatagtc ccacccaccg aataccagta acagaaggta ctcagagttc tagtggagcc
       61 ttctctttat cttttccacc tgagaacgat acaatccaag tcaataatca tctttcaata
      121 tcgataacaa atcaggaaaa caatgacgac aacctcaaga ttacatttaa agatctaaaa
      181 ttggccacag aaaacttcca tgttagcaat tgtgttggtg gagggggatt tggaaatgtt
      241 tataaaggaa aacttccaca aagtgatcat atgattgttg cgaagaaatt ggatacacag
      301 ggtggtcaag gggaacaaca atttcgtaat gagctccaaa ttctttttaa gtataagcat
      361 gaaaatatca tcgggcttgt aggctattgt gatgaagaaa atgaaaaaat catcgtttat
      421 ctgtatgaac ctagaggaag tcttgatagg tatttgagtg atgctcgtct caattggata
      481 aaaagactta acatatgtat tgaagttgca accgcattgg attttcttca tagaggaatt
      541 ggaaaacaag caacggtgat acatagggat atcaaaaccg ctaacattat gctaactagc
      601 gattga
//
LOCUS       XM_071831583             759 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calmodulin-binding
            receptor-like cytoplasmic kinase 2 (LOC139841361), mRNA.
ACCESSION   XM_071831583
VERSION     XM_071831583.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..759
                     /gene="LOC139841361"
                     /note="calmodulin-binding receptor-like cytoplasmic kinase
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 26 Proteins"
                     /db_xref="GeneID:139841361"
     CDS             1..759
                     /gene="LOC139841361"
                     /codon_start=1
                     /product="calmodulin-binding receptor-like cytoplasmic
                     kinase 2"
                     /protein_id="XP_071687684.1"
                     /db_xref="GeneID:139841361"
                     /translation="MLTICKHQNIVTLLGFCVEGSETILVVEHASNGYLDDYLFNIKE
                     KPFLTWAKRLKICLDIAHALKYFHHEMENQKTIINCDIRSGTISLDENWQAKIVDFGF
                     SVFLPPNLDGDALHLNCILGHECYIDPEYDETGKLKRESDVYSFGVVLFEILCGRVAN
                     DPAYIKESDIGLAFVVRRCFYDETPMEMNQMIDPLIKDECANGYSLDIFMKDAYQCLA
                     KSQEQRPTMEVIIKELEKALSFQTLKENAVVNLC"
     misc_feature    1..708
                     /gene="LOC139841361"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgcttacaa tttgtaagca tcaaaacata gtcaccctac ttggattttg tgttgaaggt
       61 tctgagacga ttctagttgt tgagcatgct tctaacggat accttgatga ttatttgttt
      121 aacatcaaag agaagccttt tcttacttgg gcaaaacgtt tgaaaatatg tcttgatatt
      181 gcacatgcat tgaaatactt tcaccatgag atggaaaatc aaaagacgat tataaactgt
      241 gatataagga gcggcacaat cagtttagat gagaattggc aggcgaagat tgtcgacttt
      301 ggattctctg tattccttcc tcctaatctt gatggtgatg ctctccatct caattgtatc
      361 cttggccatg aatgttatat tgatccagaa tatgatgaga cgggtaagtt gaaacgagaa
      421 tcggatgtat atagttttgg agtagttttg ttcgaaatac tttgtgggag ggtagccaat
      481 gaccctgctt atattaagga gagtgatata gggctggcat ttgttgtacg gcgatgcttc
      541 tatgacgaaa caccaatgga aatgaatcaa atgatagatc ctttgattaa ggatgaatgt
      601 gccaacggat attctttaga catattcatg aaagatgcat atcaatgtct tgcgaaaagt
      661 caagaacaac gtccgaccat ggaagtcatc atcaaagagc ttgagaaagc attatcgttt
      721 caaacgttaa aggaaaatgc agttgtaaat ctttgttga
//
LOCUS       XM_071831584            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At5g61350 (LOC139841362), mRNA.
ACCESSION   XM_071831584
VERSION     XM_071831584.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139841362"
                     /note="probable receptor-like protein kinase At5g61350;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 16 Proteins"
                     /db_xref="GeneID:139841362"
     CDS             1..1035
                     /gene="LOC139841362"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At5g61350"
                     /protein_id="XP_071687685.1"
                     /db_xref="GeneID:139841362"
                     /translation="MEYHIGIEGYYNLYNAQLEHFHQVTFSSVEEKNKSEPTKRVTNV
                     LIKCIFYRGERSKRVFVRDAEVFTTCKHRNIVTLLGLCDEGTEMILVFEYPSNGNLYD
                     YLINIKESPILTWTQRLRICLDIAYGLKYLHYEMENGKVIIHGDLKSKCIGLDENWGA
                     KIVQFGLCEYLRPKDEDVVHFKNSFGANSYRDPEFVTTRNLKRESDVYSLGVVMFEIL
                     CGRTADDHIYKKGSDTGLASVARRCFHEGRIQEIIDPIVTNDIGENKFSLNRGPSKKS
                     LAAFLDIAYRCLTEIQNQRPTIKVVVDELEKALYFQVSSHSKNLKPFFSSYFYYWWYL
                     LLSTVVSLGF"
     misc_feature    124..921
                     /gene="LOC139841362"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atggaatatc atattgggat tgaaggatac tacaacttgt acaacgcaca acttgagcat
       61 tttcatcaag taacattttc ctcagtagaa gagaagaata aaagtgaacc aactaagaga
      121 gtcactaatg tattaataaa atgtattttc tatagaggtg agcgatcaaa aagagtattt
      181 gtaagagatg cggaagtatt tacaacttgt aagcatcgca acattgtcac tctacttgga
      241 ttgtgtgacg aaggcaccga aatgatcctc gtttttgagt atccttcaaa tggaaatctt
      301 tatgattatt tgataaacat caaagaaagc cctattctta cttggaccca acgattgaga
      361 atatgtcttg atattgcgta tggattgaag taccttcact atgagatgga aaacggaaag
      421 gtgattatac atggtgattt aaagagcaaa tgcattggtt tggatgagaa ttggggggcc
      481 aagattgttc aatttggtct ctgtgaatac cttcgtccga aagatgagga tgttgttcat
      541 ttcaaaaatt cttttggcgc taatagttac agggatccag aatttgttac gacgagaaat
      601 ttaaaacgag aatcagatgt atacagctta ggagtagtta tgttcgagat tctgtgtggg
      661 cggacagccg atgatcacat ttacaaaaag gggagtgaca ctgggctggc atctgtggca
      721 agaagatgct tccatgaagg aaggatacaa gaaattatag atcctatagt tacgaatgac
      781 atcggtgaga acaaattttc ccttaataga ggacctagca agaagtctct cgctgcattt
      841 ttggatattg cttacaggtg tttgacagaa attcaaaatc aacgccctac aataaaagtc
      901 gttgtagatg aactggagaa agccttatat tttcaagtaa gttcacattc taaaaacttg
      961 aagccatttt tctcatcata tttctattac tggtggtatt tattacttag tacagtcgta
     1021 tccttaggtt tctag
//
LOCUS       XM_071831585            1053 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At5g38990 (LOC139841363), mRNA.
ACCESSION   XM_071831585
VERSION     XM_071831585.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1053
                     /gene="LOC139841363"
                     /note="probable receptor-like protein kinase At5g38990;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 39 Proteins"
                     /db_xref="GeneID:139841363"
     CDS             1..1053
                     /gene="LOC139841363"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At5g38990"
                     /protein_id="XP_071687686.1"
                     /db_xref="GeneID:139841363"
                     /translation="MDSPTHRIPATEGTQSSSGAFSLSFSPENDTIQVNNHISVSITN
                     QENNDDYLEITFKDLKLATENFHFSNCVGGGGFGNVYKGKLPQSDHMIVAKKLDTRGG
                     QGEQQFRNELQILFDYKHENIIGLVGYCDEENEKIIVYLYEPRGSLDRYLSDARLNWI
                     KRLNICIDVATALDFLHRGIGKQATVIRRDIKTANIMLTSDWNAKLGDFGLSLMGAIH
                     KENDYVIDHACGTPGYVDPLYLISGFLTKESDIYSFGVVLFEILCGLSTYETHKREGT
                     YLPSFIKHNFENEKYDEVVFEKIKAHIMPKALATFRMIAYRCLHEDREKRPKAKEVVK
                     ELKKALRYQVSYHSFT"
     misc_feature    214..1014
                     /gene="LOC139841363"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(214..225,232..234,238..240,277..279,283..285,
                     370..372,418..429,568..570,580..585,589..591,619..624)
                     /gene="LOC139841363"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggatagtc ccacccaccg aataccagca acagaaggta ctcagagttc tagtggagcc
       61 ttctctttat ctttttcacc tgagaacgat acaatccaag tcaataatca tatttcagta
      121 tcgataacaa atcaggaaaa caatgacgac tacctcgaga ttacatttaa agatctaaaa
      181 ttggccacag aaaacttcca ttttagcaat tgtgttggtg gagggggatt tggaaatgtt
      241 tataaaggaa aacttccaca aagtgatcat atgattgttg cgaagaaatt ggatacacgg
      301 ggtggtcaag gggaacaaca atttcgcaat gagctccaaa ttctttttga ttataagcat
      361 gaaaatatca ttgggcttgt aggctattgt gatgaagaaa atgaaaaaat catcgtttat
      421 ctgtatgaac ctagaggaag tcttgatagg tatttgagtg atgctcgtct caattggata
      481 aaaagactta acatatgtat tgatgttgca accgcattgg attttcttca tagaggaatt
      541 ggaaaacaag caacggtgat acgtagggat atcaaaaccg ctaacattat gctaactagt
      601 gattggaatg caaaacttgg tgattttggg ctttccttga tgggtgcaat acacaaggaa
      661 aatgattacg tcatcgatca tgcatgtggg acaccaggct atgtggatcc actttactta
      721 atatcgggct tcttaacaaa agaatccgat atatattctt ttggtgtggt tttatttgaa
      781 atattgtgtg gcttatcaac gtatgagacc cacaaacgtg aaggtaccta tctaccgagt
      841 ttcattaaac acaactttga aaatgaaaaa tatgatgagg tagtgtttga gaaaataaaa
      901 gcacatatca tgccaaaagc attggctaca tttcgaatga ttgcctaccg gtgtctacat
      961 gaagataggg aaaagcggcc gaaagccaaa gaagttgtaa aagaacttaa gaaggcattg
     1021 agatatcaag taagttatca tagttttact tga
//
LOCUS       XM_071831586            1668 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841364), mRNA.
ACCESSION   XM_071831586
VERSION     XM_071831586.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1668
                     /gene="LOC139841364"
                     /note="uncharacterized LOC139841364; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841364"
     CDS             1..1668
                     /gene="LOC139841364"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687687.1"
                     /db_xref="GeneID:139841364"
                     /translation="MESVFHLSNCGEADKVKYVTGNLSGGALTWWTAYAGTVGWTPAL
                     AIPWETLKTMLAGKYFPRNQVQKFEVEFWVLRMKNLEVEEYNNRFLELAALCPSMVTP
                     ESKKIEKKFEPTQGASQNSNKKIGDITKNGYVGTKPQCKRCNKHHHGLCTAKCGRCKR
                     IGHSTENCRVTLPATNTTPTVPTCFGCGEKGHYRNNCPKNKTATTDTAKGRAFVMTVE
                     EAWNDDDVITGTFLVNNYYASVLFDTGANRSYVSIEFCTLFDEKPQTLDTKCLVEMAN
                     GKFVKVDRIYKECNLTLANKTFKVDLMPVELGSFDVVLGMDWLSPMKVGIQCFDTTIN
                     IPLETGEILVIQGDKGGSKLNLISCIKTRKYLMKGCQAILAHIKEVKPDERRIEDVPV
                     VKDFPEVFPDELLGLPPQRQTVQFLGHVVDSNGIHVDPAKITAIQNWETPKNAKHIQS
                     NNTNSPSQQLNSPLHINPSATAQTNPSPLIPPTRSMTTRSMSGIFKPKIPLNLSTSTF
                     ISPLPSNPKQALDDPNWYSAMTDEYRALIDNKTWILVPRKPNMNVIM"
     misc_feature    49..327
                     /gene="LOC139841364"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    463..>624
                     /gene="LOC139841364"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    622..999
                     /gene="LOC139841364"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(727..729,733..735,739..741,814..822,937..939)
                     /gene="LOC139841364"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    727..735
                     /gene="LOC139841364"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    727..729
                     /gene="LOC139841364"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(814..825,835..846)
                     /gene="LOC139841364"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggaatctg tgtttcatct gagtaattgc ggtgaagctg acaaggtcaa gtatgttact
       61 ggaaatctat ctggtggagc tctaacttgg tggactgctt atgctggtac agttggatgg
      121 actcctgccc tagccatacc ctgggaaaca ttaaaaacta tgctggctgg caagtatttt
      181 cccaggaatc aagttcagaa atttgaagtc gaattttggg tgttgagaat gaaaaatctt
      241 gaagttgagg aatacaacaa ccgatttctg gagctagctg ctctatgccc tagtatggtt
      301 actcctgaga gcaagaagat tgaaaaaaag tttgaaccta ctcaaggtgc aagccagaat
      361 tcaaacaaga agattggtga tattacaaaa aatggttatg ttggaacaaa gccgcaatgt
      421 aaacgctgta ataaacatca tcatgggttg tgcactgcta agtgcggaag gtgtaagagg
      481 attggtcact cgaccgagaa ttgtagagtt actctgcctg ctacaaatac aactccaacc
      541 gttcctactt gtttcggttg tggggaaaag gggcattaca ggaacaactg ccctaagaat
      601 aagactgcaa caactgatac tgctaaggga agagctttcg tcatgaccgt tgaagaagct
      661 tggaacgatg atgacgtcat cactggtacg tttcttgtca acaactacta tgcttctgtt
      721 ttattcgata ctggtgctaa tagaagctat gtgtctattg aattctgtac cttatttgac
      781 gagaaacctc aaaccttaga cactaagtgt cttgtagaaa tggccaacgg gaaatttgta
      841 aaagttgacc gaatctacaa ggaatgtaat ctgactctag ccaataaaac cttcaaggtt
      901 gacttaatgc ctgttgaact aggaagcttt gatgtagtct tagggatgga ttggttatcc
      961 ccaatgaaag tgggtatcca atgttttgat acgacaatta atattcctct cgaaactggt
     1021 gaaattcttg tcatccaagg agacaagggt ggttccaaac ttaatcttat ctcatgcatc
     1081 aaaacccgaa agtaccttat gaaaggatgt caagccattt tggctcacat aaaagaagtc
     1141 aagccagatg aacggcgtat tgaagacgtt cccgttgtta aagactttcc tgaagttttt
     1201 cctgatgaac tccttggtct tccaccacaa agacaaactg ttcagttttt gggacatgta
     1261 gttgacagca atgggataca tgttgaccct gcaaagatca cggctattca gaactgggaa
     1321 acacctaaga acgcgaaaca cattcagtcc aacaacacaa actctccatc tcaacaacta
     1381 aattctccat tgcacattaa tccttccgcc acagctcaaa caaatccatc tcctcttatt
     1441 cctccaactc gttctatgac tactaggagc atgtcaggta tatttaaacc gaaaattcct
     1501 ctcaatcttt ctacctctac atttatatcg cctctacctt ctaatcccaa acaagccctg
     1561 gacgacccta attggtactc tgctatgacc gacgaatacc gggcacttat tgataataaa
     1621 acatggatcc ttgtgccccg aaagcctaat atgaatgtta taatgtaa
//
LOCUS       XM_071831587             678 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841365), mRNA.
ACCESSION   XM_071831587
VERSION     XM_071831587.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..678
                     /gene="LOC139841365"
                     /note="uncharacterized LOC139841365; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841365"
     CDS             1..678
                     /gene="LOC139841365"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687688.1"
                     /db_xref="GeneID:139841365"
                     /translation="MQVPQGQNKKAGALSKLAALAFDHLHKDVWVELLTEKSINEKST
                     GAPIEEESLNWMTPLLKFLTEGELPADEKEARKICMKAPIYAFIEGVLYRKSYLGPSL
                     LCIGPNQAKEVLREVHEGSCALHSGGIKFLVVAIDYFTNSKGGGRGRRIRNFFWEDIV
                     CRFGIPNEIVSDNGTQFEGEPFWSWCQELNIKKSFTLVAHPQANGQCEITNRDIVRGI
                     KARPGLY"
     misc_feature    <463..666
                     /gene="LOC139841365"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgcaggtac ctcagggaca aaataagaaa gcaggtgcac tgagcaagtt ggccgccctc
       61 gcttttgatc atctgcacaa agatgtgtgg gttgaattgc taacagaaaa atctattaat
      121 gagaaatcaa ctggtgcgcc catcgaggag gaaagcctaa attggatgac accgttacta
      181 aaattcttaa ccgagggcga acttccagca gatgaaaaag aagcacgaaa gatttgcatg
      241 aaggccccca tttatgcatt cattgaaggt gttttatata gaaaatctta tctagggcct
      301 agcctgttgt gcattggacc taatcaagct aaagaggtgc ttcgagaagt tcacgagggt
      361 tcctgtgctc tgcattcagg aggaataaaa ttcttggtgg tggcaattga ttatttcacc
      421 aattcaaaag gtggaggcag aggtaggcgc attcgtaact tcttttggga agatattgtg
      481 tgcaggtttg gtatccctaa tgaaattgtc agcgataatg gtactcagtt cgaaggcgag
      541 cctttctgga gctggtgtca agagctgaat atcaagaagt catttacttt ggtcgctcac
      601 ccacaggcca atggccaatg tgaaataaca aaccgagata tcgtaagggg aataaaagcg
      661 cgcccgggct tgtactga
//
LOCUS       XM_071831588            2351 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like protease
            SBT1.2 (LOC139841367), mRNA.
ACCESSION   XM_071831588
VERSION     XM_071831588.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2351
                     /gene="LOC139841367"
                     /note="subtilisin-like protease SBT1.2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139841367"
     CDS             1..2310
                     /gene="LOC139841367"
                     /codon_start=1
                     /product="subtilisin-like protease SBT1.2"
                     /protein_id="XP_071687689.1"
                     /db_xref="GeneID:139841367"
                     /translation="MPLKNILVCTNIFILICFFPTQTLAHEPLKTYIIQLHPESMPGL
                     IFASKLHWHLSFLETIVNDPDARLLYSYRSAMEGFSAQLSEPEIELIRKMKHVVAIRL
                     DRVHKLHTTYSYKFLGLSPNAEGGAWVKSGFGRGSIIGVLDTGVWPESPSFDDQDMPR
                     VPKKWRGVCQQGENFNSSNCNKKLIGARFFSKGHRIASVSPTENEMSEYLSPRDSHGH
                     GTHTASTAAGSTVAMASVLGNGAGEARGMAPGAHIAIYKVCWFSGCYSSDILAGMDAA
                     IRDGVDVLSLSLGGFPIPLYDDSIAIGSYRAMEHKISVICAAGNNGPIENSVANVAPW
                     VTTVGASTLDRRFPAVVRIGNGKILYGESMFPGNFHHDIEKQLEIVYLSGGERGSNYC
                     FKGSLPRKKVQGKMVVCDRGINGRAEKGQIVKESGGAAMILANTEINMEEDSIDAHVL
                     PATLIGYSEAVQLKSYINSTMRPTGRIIFGGTVIGNSRGPSVAQFSSRGPSFMDPVIP
                     KPDMIAPGVNIVAAWPQNLGPSALPEDSRRVNFTVMSGTSMSCPHVGGLTALIRSAHP
                     KWSPAAIKSALMTTADITDHYGKPIIDGNKRAGILAMGAGQVNPEKAIEPGLIYDITP
                     NEYIIHLCTLGYTKSEIFIITHRNVSCHDLMSKNRGFGLNYPSISVIFKPGMSSKMIK
                     RRVTNVGEPKSVYVVKVVAPEGVKVRVRPRKLSFSRSNQSLSYRVWFILRKSAGSKRS
                     TFAEGQLTWMNFKDNKIKIRSPVLVTTHN"
     misc_feature    91..327
                     /gene="LOC139841367"
                     /note="Peptidase inhibitor I9; Region: Inhibitor_I9;
                     pfam05922"
                     /db_xref="CDD:428674"
     misc_feature    316..1746
                     /gene="LOC139841367"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; Region: Peptidases_S8_3; cd04852"
                     /db_xref="CDD:173795"
     misc_feature    order(427..429,652..654,805..807,862..864,958..960,
                     1642..1644)
                     /gene="LOC139841367"
                     /note="active site"
                     /db_xref="CDD:173795"
     misc_feature    order(427..429,652..654,1642..1644)
                     /gene="LOC139841367"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     misc_feature    1048..1431
                     /gene="LOC139841367"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     Region: PA_subtilisin_like; cd02120"
                     /db_xref="CDD:239035"
     misc_feature    1321..1329
                     /gene="LOC139841367"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]; other site"
                     /db_xref="CDD:239035"
     misc_feature    1987..2295
                     /gene="LOC139841367"
                     /note="Fibronectin type-III domain; Region: fn3_6;
                     pfam17766"
                     /db_xref="CDD:465493"
ORIGIN      
        1 atgccactca aaaacatcct tgtttgtacc aacattttca tacttatatg tttttttcca
       61 acccaaactt tagcccatga acccctcaaa acctacatta ttcaactcca ccccgaatca
      121 atgccgggct tgattttcgc ttccaagctc cattggcacc tctcgtttct tgaaacgatc
      181 gtaaacgacc ctgatgcacg tctactgtac tcatacaggt cagccatgga gggcttctcg
      241 gctcaactct ctgagcccga aatagagttg atacgtaaaa tgaaacacgt tgtggctata
      301 agactagacc gggtccataa actacatacg acttattctt acaagttctt ggggttaagc
      361 ccgaatgctg aaggtggtgc ttgggttaag tcagggtttg gtcgtgggtc gatcattgga
      421 gtacttgaca cgggtgtttg gcccgaaagc ccgagttttg atgatcaaga tatgccacgt
      481 gtaccaaaga aatggagagg ggtttgtcaa caaggtgaga attttaattc ttcgaattgt
      541 aataaaaagt tgattggtgc ccggtttttc agcaaaggtc atcgtatcgc ttcggtgtct
      601 ccaaccgaaa atgaaatgtc agagtatctg tcgcctcgtg actcacacgg acatgggacc
      661 cacacggcgt caactgcagc ggggtccacc gttgcgatgg cgagtgtgct tggtaatggt
      721 gcaggggaag ctagaggtat ggcaccagga gcccatattg ctatatataa agtttgttgg
      781 ttcagtggtt gttatagttc tgatatttta gcgggaatgg atgctgcgat tcgagacggt
      841 gttgacgttc tttcgttatc gcttggtggg ttcccaattc cactttatga cgatagcatt
      901 gcgattggta gttatcgggc tatggaacat aagatatcgg tcatatgtgc tgctggcaac
      961 aacgggccca tagaaaactc ggttgccaat gtggcaccat gggtcacaac cgttggtgcc
     1021 agcacacttg accggaggtt tccagctgtt gttcgtatcg ggaatggaaa gattctttac
     1081 ggggaatcta tgttccccgg gaacttccac cacgatatcg aaaaacagct ggaaatcgtt
     1141 tatttatccg gtggagaacg aggaagcaat tattgcttca agggctctct accaagaaaa
     1201 aaagtacaag gaaaaatggt ggtttgcgat cggggtatta acgggcgggc cgaaaaagga
     1261 caaatcgtta aagagtccgg tggggccgcc atgatcctag ccaacacgga gataaacatg
     1321 gaagaagact cgatcgatgc acatgtttta cccgccacat tgatcgggta ctcagaagcg
     1381 gttcaactaa aaagttacat caactctact atgcgaccca cgggccgcat aatattcggt
     1441 ggaactgtaa taggaaactc tagaggacca tcagtggctc agttttcatc acgcgggccc
     1501 agtttcatgg accccgtgat acctaaacca gatatgatag cgcccggtgt taacatagta
     1561 gccgcttggc cgcagaactt agggccttcg gcccttccgg aagattctag aagagtcaat
     1621 ttcacggtca tgtccggaac ttctatgtcg tgtcctcatg tgggcgggct aaccgctttg
     1681 atccggtctg ctcatccaaa atggagcccc gcagctataa aatcggctct tatgactact
     1741 gcagatataa cagaccatta tgggaagcca attatagatg gaaataaacg ggccgggatt
     1801 ttagctatgg gagcaggaca agtaaacccc gaaaaagcta tagaacctgg tttgatttac
     1861 gacattactc caaacgaata catcattcat ttgtgtacac tcgggtacac aaaatcggag
     1921 atctttatta ttactcatag gaacgtgagt tgtcacgatt tgatgagtaa gaacaggggg
     1981 ttcggcttga attacccttc gatttcggtg atatttaagc ccggaatgag tagtaagatg
     2041 atcaaaaggc gtgtgacgaa tgtgggtgag cctaagtctg tttacgtggt taaagtggtt
     2101 gcaccggaag gtgttaaagt gcgggtcaga ccaagaaagc tatcgttttc aaggtcgaat
     2161 cagagtttga gttatcgagt ttggttcatt ttgagaaaat cggcagggtc taaacggtct
     2221 acgtttgctg aaggacagtt gacttggatg aactttaagg ataacaaaat caagatcaga
     2281 agtcctgttt tagtcacaac tcataattaa atgtaggagc ttagaactaa tgatgtttgt
     2341 atttcattga a
//
LOCUS       XM_071831590            3248 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841368), mRNA.
ACCESSION   XM_071831590
VERSION     XM_071831590.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3248
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3248
                     /gene="LOC139841368"
                     /note="uncharacterized LOC139841368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139841368"
     CDS             1..3066
                     /gene="LOC139841368"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687691.1"
                     /db_xref="GeneID:139841368"
                     /translation="MSYKHKSQSQLFLFLFLFLFCCSLVFAKVVEVNDEASIMLLIKS
                     HLIDPLDQLKDWKITEEHNSHCNWTGIVCNSIGEIEKLDLSKRNLSGRISDEIQNLRS
                     LTSLNLCCNGFATPLPRSFSNLTKLQTVDLSQNYFVDSFPKGLGMAIGLTLLNASSNN
                     FSGDIPEDLANNTVLETLDLRGNFFVGSIPVSFRSLGKLKFLGLSGNNLTGPIPREIG
                     ELSSLESIILGYNEFSGAIPVEFGNLTSLKYLDLAYGNLGGSIPQELWNLKALEAMFL
                     YKNNLEGKIPSEIRKLTSLTQLDLSDNLLSGEIPAEISELKSLQLFNVMSNKLTGSVP
                     SGISKLSQLRVLELWNNSFSGSLPDDLGLNSPLEWVDLSSNSFTGRIPDSICHQGNLT
                     KLILFNNKFSGPIPTGLSTCNSLVRVRMQNNFISGVIPVGFGSLEKLQRLELANNNLT
                     GQIPNDISLSTSLSFIDFSRNQLQSSLPSSILLIPNLQNFLVSGNNLIGKIPNQFQDC
                     PSLSILDLSSNQFTGTVPSSIASCQKLVYLNLKSNQLTGEIPVPIAMMGTLAVLDLSS
                     NSLTGEIPESFGNSPALESLNVSYNRLQGPVPENGMLRTINPSDLVGNNGLCGNVLPP
                     CTGSTSHNSRHKRLHTRHMITGWVIGMSVVLAVLMAAFAGKTLYCKWYTNGGCFEKRF
                     EMGKGEWPWRLMSFQKLNFNSNDILNCVKESNVIGMGATGVVYKAEIARTNTIVAVKK
                     LWSTKNDIELGSSAGDFVGEVNVLGKLRHRNIVRLLGYLHNNTNAMIVYEYMSNGSLG
                     EALHGPGRLLVDWVLRYNIAVGVAQGLSYLHHDCYPPVIHRDVKPNNILLDGNLEARI
                     ADFGLARMMVKKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSYGVVLMELITGKHP
                     IEPEFGDSVDIVEWVRRKIRDNKPLTEVVDQNVGNCKHVEEEMLLVLRIALICTAKLP
                     KDRPSMRDVISMLEEARPRRKSSGNSNTVPTSNDKDKPVFSTSPVNDLL"
     misc_feature    100..2985
                     /gene="LOC139841368"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    238..306
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    307..378
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    379..450
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    451..522
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    523..594
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    595..666
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    667..738
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    739..810
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    811..882
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    883..954
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    955..1026
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1027..1098
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1099..1170
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1171..1242
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1243..1314
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1315..1386
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1387..1458
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1459..1530
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1531..1596
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1603..1674
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1675..1737
                     /gene="LOC139841368"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 atgtcatata aacataaatc tcaatctcaa ttgttcttat tcttgttctt gttcttgttc
       61 tgctgttctt tagtgtttgc aaaggtggtg gaagttaatg atgaagcttc gattatgtta
      121 ttgattaaat ctcatcttat tgatccttta gatcaactta aagattggaa gatcactgaa
      181 gaacacaatt cacattgtaa ttggactgga attgtgtgta attcaattgg agaaatcgaa
      241 aaacttgatc tttcgaaaag gaatttaagt gggcgaattt cggatgaaat tcaaaatctt
      301 cggagtctta cttcattaaa cttatgttgt aatgggttcg ctacaccgtt gcctagatca
      361 ttttcgaacc ttacgaagct tcaaacagtt gatttgagtc agaattattt tgttgactct
      421 tttcctaaag gtttaggaat ggcgatcggg ctgactttac ttaacgcctc gagtaacaac
      481 ttttcaggtg atattcccga ggatcttgcg aacaatacgg tgttagagac gttggattta
      541 cgaggtaact tcttcgtagg gtcaattccg gtgtcgttca ggagtttggg gaagttaaag
      601 tttctcgggc tttcggggaa taatctaacg ggcccgatac caagagaaat cggggagctt
      661 tcgtctttgg agagtattat tctcgggtat aacgagtttt cgggtgctat tccggtagag
      721 ttcgggaatt tgacgagttt gaagtatctt gatcttgcgt atgggaatct cgggggttca
      781 attccccagg agctctggaa tttaaaagcg ttggaagcaa tgttcttgta taagaacaat
      841 ctcgaaggaa agattccttc cgagattagg aagttgactt ctttgactca gctggatctc
      901 tcggataact tgttatccgg cgagatccca gctgagatat cagaattgaa gagcttacag
      961 ctcttcaatg tgatgtcaaa taaactcacg ggttcggttc cttcgggaat tagtaaactg
     1021 agtcaactca gagttctcga gttatggaac aattcctttt cggggtctct tcccgatgac
     1081 ctcgggttaa actcgcctct cgaatgggtt gatctatcat cgaattcttt cacaggacga
     1141 atccccgata gcatatgtca tcaaggtaat ctaacgaaac ttattctctt caataacaag
     1201 ttttcgggtc cgattccaac cggactatca acatgtaatt cgttagtacg cgttcgtatg
     1261 caaaacaact tcatttcggg tgtaattcca gtcggattcg gtagtcttga aaaacttcaa
     1321 cgactcgaac tagcaaacaa caacctaaca ggtcaaatcc cgaacgacat ttccttatcg
     1381 acttcccttt cgttcatcga tttctcccga aatcaactcc aatcgtcact tccatcttca
     1441 attctcttga tcccgaacct tcaaaacttt ctcgtttcgg gaaacaatct gatcgggaaa
     1501 atccccaatc aatttcaaga ctgtccttct ctttcgatcc tcgatctatc ttctaaccaa
     1561 ttcaccggga ccgttccctc tagtattgct tcctgccaaa agttagttta cttaaacctc
     1621 aaaagtaacc aactaaccgg cgaaatcccg gtgcccatcg ccatgatggg caccctcgcg
     1681 gttttagatc tttccagcaa ctccttaacc ggagaaatcc ccgaaagctt cgggaactcg
     1741 ccggctctgg agtcgttaaa cgtatcctac aaccgacttc aaggcccggt tcccgaaaac
     1801 gggatgctta gaacgataaa cccgagtgat ctagtcggaa acaatggtct atgcggtaac
     1861 gtactacctc cgtgcacagg cagcacgagt cacaattcac gacacaagcg tttgcacacg
     1921 agacacatga tcaccggctg ggtgatcggt atgtctgtcg tgttagccgt tttaatggca
     1981 gctttcgcag gtaaaacgtt gtactgtaaa tggtatacga atgggggttg tttcgaaaag
     2041 agattcgaga tgggaaaagg cgaatggccg tggcgtttaa tgtcatttca gaaactgaat
     2101 ttcaacagta acgatattct gaactgcgta aaagaatcaa atgtgattgg aatgggagct
     2161 actggagttg tttacaaagc tgaaatcgcg cgaacgaaca ctatcgtggc ggttaaaaag
     2221 ctatggagca ctaaaaacga catcgaattg ggaagcagtg cgggtgattt cgtcggtgaa
     2281 gttaacgtgt tggggaaact acgacatcga aacattgtta gattgttggg gtatcttcat
     2341 aataatacga atgcgatgat tgtttacgag tatatgagta atgggagttt aggcgaagca
     2401 ttacatgggc ctgggaggtt gttggttgat tgggttttga gatataatat tgctgttggt
     2461 gtcgctcaag ggctgtcgta tttacatcat gattgttacc cgccagtgat ccatcgtgat
     2521 gtgaagccga ataacatttt gttagacggg aacttggagg cccgaatcgc ggatttcggg
     2581 ctggctcgga tgatggtcaa gaaaaatgag accgtttcga tggttgctgg atcttatggt
     2641 tacatcgccc cggaatacgg atacacgtta aaggtcgatg aaaagagtga tatatacagt
     2701 tacggggtgg ttttaatgga actgataact ggaaaacatc cgatcgaacc tgaatttggt
     2761 gattcggttg acatagtaga atgggttcgg agaaaaatta gagataacaa accgttaacg
     2821 gaagtagtag atcaaaatgt aggaaactgc aaacatgtag aagaagagat gttgttagta
     2881 ctcagaatag cattaatttg tactgcaaag cttccgaaag atcgaccctc gatgagagat
     2941 gttataagca tgctcgagga agcgagaccg agaagaaaaa gtagcgggaa tagcaacaca
     3001 gtccccacaa gtaacgataa agataaacct gtttttagta cgtcgcctgt aaacgatttg
     3061 ctgtaaatgg gtttgaagaa acggaatggt actgagaaga atttgtgcag ctggagcgcg
     3121 attttctgtt aattatgtgt agttattatg catattttgt aagttttttt gttaattatg
     3181 tgtagaaaag tatgttgatt cttactgaaa ataatgtaat cataccacct cattcttata
     3241 agtaaatg
//
LOCUS       XM_071831591             601 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL14-like (LOC139841369), mRNA.
ACCESSION   XM_071831591
VERSION     XM_071831591.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..601
                     /gene="LOC139841369"
                     /note="large ribosomal subunit protein uL14-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139841369"
     CDS             110..601
                     /gene="LOC139841369"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL14-like"
                     /protein_id="XP_071687692.1"
                     /db_xref="GeneID:139841369"
                     /translation="MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKG
                     IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEGQI
                     FQVTYIIKLHLMLIFLCMRCYNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAAN
                     AIV"
     misc_feature    113..598
                     /gene="LOC139841369"
                     /note="60S ribosomal protein L23; Provisional; Region:
                     PTZ00054"
                     /db_xref="CDD:185418"
ORIGIN      
        1 gggcttagcc caaaacttta ttgaactcaa gcagagcttt cacaatacag ttatataaaa
       61 gcctagaaac cctaatttcc atcgcatcaa caaacaacgg cgatcaacaa tgtcgaaaag
      121 aggtcgcggt ggttccgccg ggaacaaatt tcgtatgtca ctcggtttac cggtggctgc
      181 gacggtgaat tgcgccgata acactggagc taagaatcta tacatcattt cagtgaaagg
      241 aatcaaagga agacttaatc gtcttccatc agcttgtgtt ggtgatatgg ttatggctac
      301 tgtgaaaaaa ggaaagcctg atcttaggaa gaaggttatg cctgctgtta ttgttcgtca
      361 acgtaaacct tggcgtcgaa aggacggtgt attcatgtac tttgaaggtc agatatttca
      421 agttacttat ataatcaaac tacatctcat gttgatcttt ttgtgtatga gatgctataa
      481 cgctggtgtc atcgtgaatc ctaaaggaga aatgaaagga tctgccatca ccggacctat
      541 tggtaaggag tgtgctgatc tgtggccaag gattgccagt gctgcaaatg ccattgttta
      601 g
//
LOCUS       XM_071831592            1797 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            5.2-like (LOC139841370), mRNA.
ACCESSION   XM_071831592
VERSION     XM_071831592.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1797
                     /gene="LOC139841370"
                     /note="protein NRT1/ PTR FAMILY 5.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139841370"
     CDS             1..1797
                     /gene="LOC139841370"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 5.2-like"
                     /protein_id="XP_071687693.1"
                     /db_xref="GeneID:139841370"
                     /translation="MVLERDSEIGPPREDFTQDGTIDLKGRPVLRPKTGRWNACYFML
                     GYEICERMAYYGIATNLVLYLTREMKEGTVTSSNSVTNWVGTVWMTPILGAYIADTYL
                     GRYWTFMVASVIYLLGMCLLTLVVTVPSLKPPSCGKNVSYLDCDKKPSSFQIGIFYCA
                     LYIIAFGAGGTKPNISTMGADQFDDFDPKERAQKLTFFNWWMFSIYFGTLFSGTFLVY
                     IQDNVGWELGYGIPTVGLVVAMAVFIVGTPRYRHKPPSGSPFTKMTKVLVATARNWKR
                     VVPDDPKELYELNMDKYDVPGKYIIGHSTSLRFLDRAAVRTEESVSEWKLCPVTQVEQ
                     TKQMLKMVPILLATFIPSTLIAQTHTLFIKQGVTLVPSMGPHFDIPPACLTVFVTISL
                     LISIVLYDRFFVPTIQKYTKNPRGITLLQRMAIGLVLHIIIMIIASIVERKRLSVAKD
                     HNIFKNDKNVPLSIFILLPQFALMGIADSFLEVAKLEFFYDQAPEGMKSLGTAYWTTG
                     IGVGYFLSGFILSTVADVTKRNGHKGWILDNLNDSRLDYYYAFFAILSFVNFLYFLVV
                     AKYFVYNVEVNGTENELQEDVGKVTEQGYITS"
     misc_feature    109..1716
                     /gene="LOC139841370"
                     /note="NRT1/PTR family (NPF), subfamily 5 of the Major
                     Facilitator Superfamily of transporters; Region: MFS_NPF5;
                     cd17417"
                     /db_xref="CDD:340975"
     misc_feature    order(148..153,160..165,172..174,271..273,502..507,
                     511..519,526..528,604..606,613..618,625..627,1042..1044,
                     1051..1056,1063..1071,1078..1080,1174..1176,1186..1188,
                     1429..1434,1444..1446,1456..1458,1504..1506,1513..1518,
                     1525..1530,1537..1539)
                     /gene="LOC139841370"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340975"
     misc_feature    <721..>1038
                     /gene="LOC139841370"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 atggttttag aaagagatag cgagattgga ccaccacgtg aagattttac acaagacgga
       61 actatagatc ttaagggaag acccgtgctg agaccgaaaa ctgggagatg gaacgcttgt
      121 tactttatgc taggatatga aatatgtgaa agaatggcat actatggaat agcaacaaat
      181 ctcgtgctgt acttaacacg agaaatgaag gaaggaacgg tgacatcatc aaatagcgtc
      241 acgaattggg ttggaaccgt gtggatgaca cctattttag gcgcatatat agccgataca
      301 tatcttgggc gatactggac ttttatggtt gcttctgtta tttacctttt gggaatgtgc
      361 ttgttgacgc ttgtggttac tgtaccatcg ttaaaaccac catcctgtgg taaaaacgta
      421 agctatctag attgcgataa aaaaccgtca tcttttcaga tcggtatctt ttattgtgca
      481 ttgtacatta tcgcgttcgg agcaggtgga accaaaccca atatttctac aatgggtgcg
      541 gaccagtttg acgatttcga cccaaaagaa cgagcccaaa aactcacctt ctttaactgg
      601 tggatgttta gcatatattt tggtactctt ttttcgggca cttttttggt gtacatacaa
      661 gataacgttg gatgggaact tgggtacggg attccaactg tcggtttagt ggtggcgatg
      721 gcggttttta tagttgggac gccgaggtac cgccataagc cgccatctgg gagcccgttt
      781 actaagatga caaaggtact agtagctaca gcaagaaact ggaaacgggt tgtacccgat
      841 gacccgaaag agctttacga attgaacatg gataagtatg atgtccccgg gaagtacata
      901 atcgggcatt cgacttcatt aaggtttctt gatcgagctg cggtaaggac tgaagaatcg
      961 gtttcagaat ggaaactgtg tccagtgacg caagtcgaac aaacaaaaca gatgctaaaa
     1021 atggtaccga tcttgttagc aacattcata cctagcacgt taatcgcaca aacgcacaca
     1081 cttttcatca aacaaggtgt aacattggtt ccgtccatgg gcccacattt cgacatcccc
     1141 cctgcatgtc ttacagtatt cgtaacaatc tctctcctaa tcagcattgt actctacgat
     1201 cgcttctttg ttccaacaat acaaaaatac accaagaacc caagaggcat cacgttacta
     1261 caacgaatgg caattgggct cgttctccat atcattatca tgatcattgc tagcatcgtt
     1321 gaacgaaaac gactaagtgt cgctaaagat cataacatat tcaaaaatga caaaaatgtc
     1381 ccccttagta ttttcattct tttacctcag ttcgcgttaa tggggatcgc ggatagtttt
     1441 ttagaagttg cgaagctcga gtttttttac gatcaagcac ccgaaggaat gaagagtctc
     1501 gggactgcgt attggacgac gggaataggt gtcgggtatt ttcttagcgg ttttatttta
     1561 tcgactgtgg ctgatgttac gaagaggaat gggcataaag gttggattct tgataactta
     1621 aacgactcac gtttggatta ttactacgcg ttttttgcta tcttgagctt tgtgaacttc
     1681 ttgtatttcc ttgtggttgc gaaatacttc gtttacaacg ttgaagtgaa tgggactgaa
     1741 aacgagttgc aagaagatgt tggaaaggtt actgaacaag gatacataac tagttga
//
LOCUS       XM_071831593             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841372), mRNA.
ACCESSION   XM_071831593
VERSION     XM_071831593.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139841372"
                     /note="uncharacterized LOC139841372; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841372"
     CDS             1..447
                     /gene="LOC139841372"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687694.1"
                     /db_xref="GeneID:139841372"
                     /translation="MNHTRRQKNRDETLDFLKPLTIPKLAKPFTPRTTAQAKPHKPPA
                     RLPPSDNKLLLAGYLAREFLTKGTLFGEPWNPARAEAVPVSAAANSADYRKPVSQKEK
                     PVEPKPGEKRKFESYNEVTGILMGNNGVHIPGIVNPTQLIRFLNLQ"
ORIGIN      
        1 atgaaccaca cgcgtagaca aaaaaacaga gatgaaacat tggacttcct caagccgtta
       61 acaataccga agctagccaa gccgttcaca cctcgaacta cggctcaagc caaaccgcat
      121 aagccgccgg ctcgactacc cccgagcgat aataaactac tacttgctgg ctacctggct
      181 cgtgagtttt taaccaaagg tacattgttc ggtgagccgt ggaacccggc tcgagccgag
      241 gctgtgccag tttcagctgc ggctaattca gcagattata gaaaaccggt tagccaaaag
      301 gaaaaaccgg ttgagccgaa gccaggggag aaaagaaagt ttgaaagcta caatgaagta
      361 acgggtattt tgatgggtaa caatggagtg catataccgg gcattgttaa cccgacccaa
      421 ctaatccgtt ttttgaattt acaataa
//
LOCUS       XM_071831594             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841373), mRNA.
ACCESSION   XM_071831594
VERSION     XM_071831594.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139841373"
                     /note="uncharacterized LOC139841373; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841373"
     CDS             1..447
                     /gene="LOC139841373"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687695.1"
                     /db_xref="GeneID:139841373"
                     /translation="MNHTRRQKNRDETLDFLKPLTIPKLAKPFTPRTTAQAKPHKPPA
                     RLPPSDNKLLLAGYLAREFLTKGTLFGEPWNPARAEAVPVSAAANSADYRKPVSQKEK
                     PVEPKPGEKRKFESYNEVTGILMGNNGVHIPGIVNPTQLIRFLNLQ"
ORIGIN      
        1 atgaaccaca cgcgtagaca aaaaaacaga gatgaaacat tggacttcct caagccgtta
       61 acaataccga agctagccaa gccgttcaca cctcgaacta cggctcaagc caaaccgcat
      121 aagccgccgg ctcgactacc cccgagcgat aataaactac tacttgctgg ctacctggct
      181 cgtgagtttt taaccaaagg tacattgttc ggtgagccgt ggaacccggc tcgagccgag
      241 gctgtgccag tttcagctgc ggctaattca gcagattata gaaaaccggt tagccaaaag
      301 gaaaaaccgg ttgagccgaa gccaggggag aaaagaaagt ttgaaagcta caatgaagta
      361 acgggtattt tgatgggtaa caatggagtg catataccgg gcattgttaa cccgacccaa
      421 ctaatccgtt ttttgaattt acaataa
//
LOCUS       XM_071831595             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841375), mRNA.
ACCESSION   XM_071831595
VERSION     XM_071831595.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139841375"
                     /note="uncharacterized LOC139841375; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841375"
     CDS             1..555
                     /gene="LOC139841375"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687696.1"
                     /db_xref="GeneID:139841375"
                     /translation="MNTHKVKGLFNSLRCISQVFADDQQKKQEIQIGAPTDVKHVAHI
                     GCDGTSEESPSWMKGFGTSSQRQATSSNVSEAPSDGPEWVSEDSGQKVSRRKRQEKQK
                     SRHRRHRSVENAPDPDSQTKSRQPRRNHTRGDEGRHSQDESLPEVPKKTREKKSKDRL
                     GRDSSRLSKSNADKVSSQAPDAVK"
     misc_feature    94..189
                     /gene="LOC139841375"
                     /note="P21-Rho-binding domain; Region: PBD; smart00285"
                     /db_xref="CDD:197628"
     misc_feature    253..>534
                     /gene="LOC139841375"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; Region: U2AF_lg; TIGR01642"
                     /db_xref="CDD:273727"
ORIGIN      
        1 atgaatactc ataaggtgaa aggtcttttt aacagcctca gatgtatatc tcaagttttc
       61 gcagatgatc aacagaaaaa acaagaaata cagatcggtg ctccaacaga cgtgaagcac
      121 gttgctcata tcggatgtga tggaacatcc gaagaatctc ctagttggat gaaggggttt
      181 ggtacatctt cacaacgtca agctacatca tcaaatgtat cggaagctcc aagtgatggc
      241 cctgaatggg tttctgaaga ttcaggccaa aaggtgtctc gtagaaaacg gcaagaaaag
      301 caaaaatcaa gacatcgacg tcatcgttca gtggaaaatg ctccggaccc tgattcacaa
      361 accaaatcaa ggcaaccgag acgaaaccac accaggggtg atgaggggcg acattcgcaa
      421 gacgagtccc taccagaagt cccaaaaaaa acccgggaaa agaaatcaaa ggacagattg
      481 ggtagggact catcaagatt gtcaaagtca aatgcagata aggttagttc gcaagcaccc
      541 gatgcagtta aataa
//
LOCUS       XM_071831596             546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841376), mRNA.
ACCESSION   XM_071831596
VERSION     XM_071831596.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139841376"
                     /note="uncharacterized LOC139841376; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841376"
     CDS             1..546
                     /gene="LOC139841376"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687697.1"
                     /db_xref="GeneID:139841376"
                     /translation="MVHNLTFSDWCQELNIKQTFTSIAHPQANGQCEVTNRDIVLGIK
                     ARLWLCRRGWIDELPNVPWAHRTTPKSATNETPFSLVYGSKAVIPAKINVPTMRIASF
                     DESINSEELRENLNLVEERREMTAIKEAINKQRIARYYNKRVQPLSVQLDNMVWWKNE
                     VSRVEDTGKLGPKWDHIRLLV"
     misc_feature    <19..156
                     /gene="LOC139841376"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atggtacaca atttgacatt cagtgattgg tgccaagagc taaatataaa gcaaacgttc
       61 acatcaattg cacaccccca agcaaacggc cagtgtgagg taacaaatcg agatatcgtg
      121 ttaggtatca aagcaagact ttggttgtgc cgaaggggtt ggatagatga actaccaaac
      181 gtgccgtggg cacaccgcac aaccccaaaa agcgcgacta atgaaacacc tttcagtttg
      241 gtgtatgggt ccaaggctgt aatacccgcg aagataaatg taccaaccat gcgcatagct
      301 tccttcgatg aaagtatcaa tagcgaagaa ctgcgtgaaa atctaaattt ggttgaagag
      361 cgcagggaaa tgacggcgat aaaagaagca atcaacaagc aaagaatcgc aagatactat
      421 aacaagcgcg tgcaaccatt atctgtccaa ttggataata tggtatggtg gaaaaatgaa
      481 gtaagcagag tggaagacac gggtaaactt ggacctaaat gggaccatat aaggttattg
      541 gtgtaa
//
LOCUS       XM_071831597             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841377), mRNA.
ACCESSION   XM_071831597
VERSION     XM_071831597.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139841377"
                     /note="uncharacterized LOC139841377; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841377"
     CDS             1..783
                     /gene="LOC139841377"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687698.1"
                     /db_xref="GeneID:139841377"
                     /translation="MAKWAIELGEHEITFLLRHSVKGQVIADFLVELPSDMIKQGETI
                     VTRRETDEFCELYTDGASSEEGAGIGLLLVSPNREAITYAIRLKFAALNNEAEYEALI
                     AGLGLAKSIDVRQLTAYVDSQLVASQLNGSFEARDTSMQKYLELTKALTNTFTVFEIK
                     QIPRNRNKKADALSKLASLLYDHFTKMVMLEVLERKSTEEDTLMATIMTEEECLMTPF
                     ITYLADGTLLEDKLQARRIRMRAPMYNFQNGILYRKSFTELA"
     misc_feature    160..534
                     /gene="LOC139841377"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(175..186,274..282,289..291,361..363,481..483,
                     523..525)
                     /gene="LOC139841377"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggcaaaat gggcaataga acttggcgag cacgaaatca ccttcctcct aagacattca
       61 gtaaagggcc aagtcatagc cgacttcttg gtagagctcc cgtctgacat gatcaaacaa
      121 ggagaaacca ttgttacaag aagggaaacg gacgaattct gcgaactata tacggatgga
      181 gcgtcaagtg aggagggagc cggcataggc ctactcctcg tttccccaaa cagagaagca
      241 ataacctacg ctatccggtt gaagttcgcc gccttaaaca acgaggccga gtacgaagca
      301 ctaatagccg gattaggctt ggcaaaaagt attgacgtac gacaacttac agcttatgtc
      361 gactcacaac tagtagcaag ccagttaaat ggcagctttg aagcaagaga tacatcgatg
      421 caaaaatacc tagagcttac gaaagcacta accaacacct tcacagtatt tgaaataaag
      481 caaatacccc gtaaccgtaa taagaaagca gatgctttga gcaagcttgc ctctctgctc
      541 tatgaccact tcaccaaaat ggttatgctt gaagtactgg aaagaaagtc aaccgaagag
      601 gatactctca tggcaacaat catgacggag gaagagtgtt tgatgacacc tttcataaca
      661 taccttgctg atggtaccct cctggaggac aaactacaag cccgcaggat acgaatgcgg
      721 gcaccaatgt acaactttca aaatggcatc ctgtatagga aatcattcac agagctagcg
      781 tag
//
LOCUS       XM_071831598             486 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841378), mRNA.
ACCESSION   XM_071831598
VERSION     XM_071831598.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..486
                     /gene="LOC139841378"
                     /note="uncharacterized LOC139841378; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841378"
     CDS             1..486
                     /gene="LOC139841378"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687699.1"
                     /db_xref="GeneID:139841378"
                     /translation="MELLTLSSTLVPRKKSKVLNIDHLCSLVEKYYPADFTEQERTRL
                     KSEMELFNIEMQNNSKLSGASTLVEVCRGLEKTEKHENYNMLDKLIRLILTLPVSTAT
                     TERAFSGMKLCKTRHSNKMSDDFLADNLLVYIEREIAEKFDSDSIIDDFKMLKGRRAE
                     L"
     misc_feature    <232..414
                     /gene="LOC139841378"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggagttat taactcttag ctccacttta gttcccagaa aaaaatcgaa agtgttaaat
       61 attgatcatc tttgttctct tgttgagaaa tactatcctg cagattttac agagcaagag
      121 aggacccggt tgaaatctga gatggagttg ttcaatattg agatgcaaaa taactcaaag
      181 cttagtggtg catcaactct tgttgaagta tgtagaggtc ttgagaaaac tgagaaacat
      241 gagaactata atatgctaga caagttgatt cgactgatct taacgcttcc tgtttcgact
      301 gccacaaccg agagagcatt ttctgggatg aaattatgca agacccggca tagcaataag
      361 atgtctgatg actttcttgc agataatttg ctggtttata ttgaaagaga aattgctgaa
      421 aagtttgatt cggattctat tatcgatgat tttaaaatgc ttaaaggtcg tcgagctgaa
      481 ttgtag
//
LOCUS       XM_071831599            1125 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841379), mRNA.
ACCESSION   XM_071831599
VERSION     XM_071831599.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1125
                     /gene="LOC139841379"
                     /note="uncharacterized LOC139841379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841379"
     CDS             1..1125
                     /gene="LOC139841379"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687700.1"
                     /db_xref="GeneID:139841379"
                     /translation="MSKFVDAYEDQLEFDTDNKGNDESEEKVNIDSTHTDGYLRSCPL
                     TLGVGRPTGVRRGSRVATLGRIRVGSWNLGTLTGKRIELVDTFLKSNVDIGCVQETRW
                     KGEGAVDIKDYRLWFSGSRIAQNGVGIFLGKLYKDNVVDMSRFSDRIMSISLIVKEET
                     FTVISAYAPHAGGDLNGHIGAEAEGYEGAHGGFGFGPRNEEGRSILKFAIAHELVVAN
                     SFFKKRDAQLATFHSGGRSTQIDFLSIHKGDLRTCRDCKVLPALTCSSHHRLLVIDLV
                     TRGRVGRRVRVVQPRILWKNLHGANTETFRTTVVDRLSIEGDNVLPTVVDQIWNRLAS
                     TIRDVAKEALGVAIGTSRAHKSSRESWCLSDDVQTKAALK"
     misc_feature    202..825
                     /gene="LOC139841379"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(214..216,295..297,499..501,520..522,526..528,
                     721..723,799..804)
                     /gene="LOC139841379"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(295..297,799..801)
                     /gene="LOC139841379"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(499..501,526..528,802..804)
                     /gene="LOC139841379"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtcgaaat tcgtggacgc atatgaggat caattggaat ttgatactga taataaagga
       61 aacgatgaat ccgaagaaaa ggttaatata gactctacac atactgatgg ttacttgagg
      121 tcatgtcctc ttactttagg ggtgggtagg cctacagggg ttagaagagg tagtagggta
      181 gccacccttg gtaggattag agtgggtagt tggaatttag gaaccttgac gggtaagagg
      241 attgagctcg ttgatacctt tcttaagagt aatgtggaca tagggtgcgt tcaagagact
      301 agatggaagg gtgaaggggc ggtagatatt aaggactata ggttgtggtt ctcgggttct
      361 aggatagcac agaacggggt aggtatcttt ttgggaaaac tatataagga taacgttgtt
      421 gacatgagta ggtttagtga taggattatg tcgattagtc taattgttaa ggaggagact
      481 ttcacggtca ttagtgcata cgcacctcat gcagggggcg atctgaacgg acacatagga
      541 gcggaggctg aaggttacga gggagcccat gggggctttg ggtttggtcc tagaaatgaa
      601 gaagggcgct caattcttaa gtttgccatt gcccacgagt tggttgtagc aaactctttc
      661 ttcaagaaga gggatgctca gttagccact tttcatagcg ggggtcgtag cacccagatt
      721 gactttctgt ccattcataa aggagatctt aggacatgta gggactgtaa ggtccttccc
      781 gccttaacgt gctcctccca tcatagattg ttggtcattg acctagtcac tcggggaaga
      841 gttggcagga gggtcagagt tgtgcaacct agaatccttt ggaagaatct acatggagcg
      901 aacacagaga cgtttagaac tactgttgtt gatagattga gtatagaagg ggataacgta
      961 ctccctactg ttgtagacca gatatggaac cgcttggcct ccaccatcag agatgtggca
     1021 aaagaggcct tgggggtggc aatagggaca tcgagagccc ataagagtag tagagaatcg
     1081 tggtgtctta gcgacgatgt acaaacgaaa gccgcgttaa agtag
//
LOCUS       XM_071831600             492 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841380), mRNA.
ACCESSION   XM_071831600
VERSION     XM_071831600.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..492
                     /gene="LOC139841380"
                     /note="uncharacterized LOC139841380; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841380"
     CDS             1..492
                     /gene="LOC139841380"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687701.1"
                     /db_xref="GeneID:139841380"
                     /translation="MRVKTIVREDLIRKRWEEYFASLFGRERPEQNGELHEVREYQNN
                     YFCMRINQEEVRSALRKMGRNKAVGPDQIPIEAWRCLEGDGVRWLTNLFNTTFRSIKM
                     PLEWRLSELWESVNETRLRRKTKVSENHFGFMPGSSSMEAIHIVISLIEKYRKKRTYT
                     WRS"
     misc_feature    331..>480
                     /gene="LOC139841380"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgcgggtca aaactatagt gagagaagac cttattagga aaagatggga agagtatttt
       61 gcatcccttt tcggtaggga aagacccgaa cagaacgggg aactccacga ggttcgtgag
      121 tatcaaaaca actatttttg catgaggatt aaccaagagg aggttagatc ggccctacga
      181 aagatgggga gaaacaaagc agtaggacca gaccaaattc cgattgaggc gtggaggtgc
      241 ctagaaggag atggggttag atggttgaca aaccttttca acacgacatt tagaagcata
      301 aagatgcctt tagaatggag actcagtgag ctttgggaga gtgtgaatga gacgaggctc
      361 cgacgcaaga caaaggtttc agagaaccat ttcggtttca tgccaggaag ctcgtcaatg
      421 gaggcgattc acatcgttat aagccttata gagaagtata ggaaaaaaag aacctacaca
      481 tggcgttctt ag
//
LOCUS       XM_071831601            1476 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides scarecrow-like protein 23
            (LOC139841381), mRNA.
ACCESSION   XM_071831601
VERSION     XM_071831601.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1476
                     /gene="LOC139841381"
                     /note="scarecrow-like protein 23; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841381"
     CDS             1..1476
                     /gene="LOC139841381"
                     /codon_start=1
                     /product="scarecrow-like protein 23"
                     /protein_id="XP_071687702.1"
                     /db_xref="GeneID:139841381"
                     /translation="MRAGLEVVQGALELIQPHEQWDYNNTIGGYATTATTQSSTMNGF
                     SDYGSKLPMNSERPNELSEWVEHVTKTLIEDLPESNPEESLQTHANVPTYGSVSPQMS
                     ETRPRKMARGNWSNEVQFGEQGNKGLNLIGLLFECAVAISVDNLGEAHRMVLELTQMA
                     SPYAPSCGERVVAYFAKAMASRVINSWLGFCSPLTNHKLIHGAFQVFNNISPFVKFAH
                     FTSNQAILEAFQHRDKVHIVDLDIMQGLQWPALFHILATRMEGPPHVRMTGMGTSMEL
                     LVETGKQLSNFAKRLGMSFEFHPVVKKLGDISDLSMLQIRRGDTLAIHWLQHSLYDAT
                     GTDWKTMRLLLELNPRIITLVEQDISHGGSFLDRFVGSLHYYSAIFDSLGAFLPNDDN
                     HRHRVEHSLIHREINNVLAVGGPGRSGDDKFKVWRSELGRNGFLQVPMSSNSLAQAQL
                     ILNMFPSTHGYRLAQVDGTLRLGWKETALYSASAWTCRVLR"
     misc_feature    388..1458
                     /gene="LOC139841381"
                     /note="GRAS domain family; Region: GRAS; pfam03514"
                     /db_xref="CDD:397536"
ORIGIN      
        1 atgagagcag gtttagaagt ggttcaaggt gcccttgaac tgatccaacc ccatgaacaa
       61 tgggactata ataacactat tggtggttat gcaactacgg ctacaactca atctagtact
      121 atgaatggtt ttagtgatta tggttcaaag ctacctatga actcggagag accgaatgag
      181 ttatcagaat gggttgaaca tgtcaccaag acgctcattg aagacttgcc ggaatccaac
      241 cctgaagaga gtttacaaac gcatgccaac gtgccaactt atggtagcgt ttcacctcaa
      301 atgagcgaaa caagaccacg aaagatggca agagggaatt ggtccaatga agttcaattt
      361 ggagaacaag gtaacaaagg gttgaatttg atagggcttt tgtttgagtg tgcggttgct
      421 atttcggttg ataacttagg tgaggctcat agaatggtgc ttgagttaac tcaaatggct
      481 tccccttatg caccatcttg tggtgaaaga gttgttgctt atttcgcaaa agccatggct
      541 agtagggtta taaactcatg gttaggattt tgctcacctt taactaacca taagctcatt
      601 cacggtgcat ttcaagtctt taataacatc tctccttttg tcaaattcgc tcactttacc
      661 tctaaccaag ccattctcga ggcttttcag caccgagaca aggtccacat agtggacctc
      721 gatatcatgc aaggattgca atggcccgca ctgtttcaca tcttagccac gcgaatggag
      781 ggcccaccac atgttagaat gaccggcatg ggtacttcca tggaacttct ggttgagacc
      841 ggcaaacaac tttcaaattt tgcaaaacgt cttgggatgt cattcgagtt tcaccccgtc
      901 gtaaaaaaac tcggagacat tagcgacctc tcgatgctac aaattcgaag aggggacaca
      961 ttagctatac attggctaca acattcactt tatgacgcaa caggaaccga ttggaagacc
     1021 atgagacttt tgctagaact taaccctaga attatcacct tagtcgaaca agacatatct
     1081 catggaggct cgttcttaga ccggtttgtt ggttctcttc attactactc cgctatattt
     1141 gattctcttg gggcattcct ccctaacgat gacaaccacc gccatcgtgt tgagcactct
     1201 ttgattcata gagagatcaa caacgtgctt gcggttggtg ggccagggag gagtggagat
     1261 gataaattta aggtttggag aagtgagctc ggacgaaacg gtttcttgca agtgccaatg
     1321 agtagtaact cattggcaca agcacaattg attctaaaca tgtttccatc aacacatggt
     1381 tataggcttg cccaagttga tgggacactt aggttaggtt ggaaagagac cgctttgtac
     1441 tctgcttctg cttggacttg tcgtgtttta agataa
//
LOCUS       XM_071831602            1434 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 11S globulin seed storage
            protein 1-like (LOC139841382), mRNA.
ACCESSION   XM_071831602
VERSION     XM_071831602.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1434
                     /gene="LOC139841382"
                     /note="11S globulin seed storage protein 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139841382"
     CDS             4..1434
                     /gene="LOC139841382"
                     /codon_start=1
                     /product="11S globulin seed storage protein 1-like"
                     /protein_id="XP_071687703.1"
                     /db_xref="GeneID:139841382"
                     /translation="MAKLFLSLSFLLLIHGCLARQYQHPLFQQNSECMIQRLDALEPV
                     ERVESQAGFTEFFDHNEQQLQCAGVEIIRHTIQPQGLLLPSYTNTPILFYVEQGRGIQ
                     GVMLPGCPETFEEPQQLQQFQGRRQGGSPMEDRHQKIHHFIQGDMVAIPTGAAHWLYN
                     DGQDELVIVALLDSTNAQNQLGNEHQRFFLAGNSGNSQQQQFQGRPRSWGRRRQQGIA
                     QQKGSNNIFQGFDVEIIAEAFNVDRETAEMLRCEEDQRGHIVMVERGLQVVSPTSREG
                     QQQEGRSGRGAANGFEETICSMKLRENIDEPSKADIYNPQAGRCTNLNSFKFPILQFL
                     KLSAERGVLYENAIVAPLWTMNAHNIIYVTSGNMRLQIVNDQGEEVFNDQLRERQLVV
                     VPQNFAVVKQAGQQGCKFIKFRTNDNAMINTLAGKNSAMRALPVDVISNAYQMSREEA
                     QRLKYSREETVLFSPQSMSSYGRKME"
     misc_feature    64..1398
                     /gene="LOC139841382"
                     /note="RmlC-like cupin superfamily; Region:
                     cupin_RmlC-like; cl40423"
                     /db_xref="CDD:477354"
     misc_feature    order(106..123,172..174,190..195,199..204,208..210,
                     214..216,220..222,250..255,259..267,271..279,283..285,
                     289..291,307..309,313..324,409..417,421..426,430..432,
                     436..456,472..474,508..510,514..516,520..522,541..549,
                     553..555,559..561,679..696,703..705,712..726,736..738,
                     745..750,787..789)
                     /gene="LOC139841382"
                     /note="intramolecular domain interface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:380369"
     misc_feature    order(199..201,250..255,259..267,316..318,322..324,
                     409..414,472..474,541..549,553..555,559..561,679..684,
                     688..696,703..705,712..726,736..738,745..750)
                     /gene="LOC139841382"
                     /note="hexamer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:380369"
ORIGIN      
        1 aacatggcta aactctttct ctctttgagc ttcttgctac tcatccatgg atgccttgct
       61 cgccagtatc agcatccatt gttccaacag aacagtgagt gtatgattca aagacttgat
      121 gctcttgaac cggttgaacg agttgaatca caagctggtt tcactgagtt ctttgatcac
      181 aatgaacaac agttacagtg tgccggtgtt gagataattc gtcataccat tcaacctcaa
      241 ggacttcttt tgccgtccta cacaaacact cccatccttt tctatgttga acaaggaagg
      301 ggtattcaag gagtgatgtt acctggttgc ccagagacat ttgaagaacc acaacaacta
      361 caacaattcc aaggacgacg tcaaggaggt agtccaatgg aggatcgcca ccagaagatt
      421 caccatttca ttcagggcga tatggtggca atccccaccg gagctgcaca ttggctttac
      481 aatgatggac aagatgaact tgttattgtt gctttacttg atagcaccaa tgctcaaaac
      541 caacttggca atgaacacca aagattcttc cttgccggaa actctggaaa ctcacaacaa
      601 caacaatttc aaggaagacc aagatcatgg ggaagaagac gtcaacaagg cattgcgcaa
      661 caaaagggtt ccaacaacat tttccaagga ttcgatgtcg agatcattgc cgaagccttt
      721 aatgttgacc gagaaacagc cgagatgctc cgatgtgaag aggaccagag aggacacatt
      781 gtcatggttg aaagaggtct tcaggttgtc agtccaacaa gccgtgaagg acaacaacaa
      841 gaggggcgtt cgggacgtgg tgcagccaat gggttcgagg aaactatctg ctccatgaag
      901 ctccgagaga acatcgatga accttcgaaa gccgatatct ataacccaca agctggaagg
      961 tgcacaaacc tcaacagctt caagttcccc attctgcagt ttttgaaact tagcgccgag
     1021 cgcggtgtcc tctacgagaa tgcaatagta gcaccactgt ggacaatgaa cgctcacaac
     1081 atcatctacg tgacaagtgg taacatgagg ttacagatag taaacgacca gggtgaagaa
     1141 gtgttcaacg accaactccg tgaacgacag ctcgtggtgg tcccacaaaa cttcgctgta
     1201 gtgaaacaag ctggtcaaca agggtgcaag tttattaaat ttagaaccaa cgacaacgca
     1261 atgatcaaca cgttggctgg aaagaactca gccatgaggg cgttgcctgt ggacgtaatc
     1321 tcaaacgcgt accagatgtc gagggaagaa gcacaaagac ttaagtacag tagagaagaa
     1381 actgtgttgt ttagcccaca atcaatgtcg tcatatggta ggaagatgga gtaa
//
LOCUS       XM_071831603            1593 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides inorganic phosphate
            transporter 1-4-like (LOC139841383), mRNA.
ACCESSION   XM_071831603
VERSION     XM_071831603.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1593
                     /gene="LOC139841383"
                     /note="inorganic phosphate transporter 1-4-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 59 Proteins"
                     /db_xref="GeneID:139841383"
     CDS             1..1593
                     /gene="LOC139841383"
                     /codon_start=1
                     /product="inorganic phosphate transporter 1-4-like"
                     /protein_id="XP_071687704.1"
                     /db_xref="GeneID:139841383"
                     /translation="MASSGNLQVFKALDGAKTQWYHFTAIVIAGMGFFTDAYDLFCIS
                     LVTKMLGRIYYHTPGSPKPGSLPPNVSAAVNGVALVGTLVGQLFFGWLGDKLGRKKVY
                     GITLMLMCLCSIASGLSFGSNPTMVMSTLCFFRFWLGFGIGGDYPLSATIMSEYSNKK
                     TRGGFIAAVFAMQGFGILGGGIFAIIISSVFDAKFKALSYEVDPIGSTVPEADYVWRI
                     ILMVGAVPAILTYYWRMKMPETARYTALVAKNANKAAEDMSKVLQMEIKPEQQKINQV
                     VEKSGNSFGLFTKEFLKRHGLHLLGTTTTWFLLDIAYYSQNLFQKDIFTAIGWIPAAK
                     KMNAIHEVYRIARAQTLIALCSTVPGYWFTVFLIDKIGRFKIQLLGFSMMTIFMFALA
                     IPYNHWTHPQNNIGFVLLYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASG
                     KLGAIVGAFGFLYLAQNQDPAKADAGYPAGIGVKNALIVLGVINFLGTLCTFLVPESN
                     GKSLEEMSRENEDEPTVVVSQV"
     misc_feature    34..1554
                     /gene="LOC139841383"
                     /note="phosphate:H+ symporter; Region: 2A0109; TIGR00887"
                     /db_xref="CDD:129965"
ORIGIN      
        1 atggcatcta gcggaaattt acaagttttt aaagcacttg atggtgcaaa aacgcaatgg
       61 tatcacttca ctgcaatagt aattgctgga atgggctttt ttactgatgc ttatgatctc
      121 ttttgcatct ctttggtcac taaaatgttg ggccggattt actaccacac accgggctcg
      181 cccaagcccg gaagtttgcc accaaacgtt tctgccgccg tgaacggagt tgcccttgtc
      241 ggaaccctag tcggccaatt gtttttcggg tggctcgggg ataagcttgg gaggaaaaag
      301 gtttatggca ttacattaat gcttatgtgt ctttgttcga ttgcttcggg cttgtcattc
      361 gggagtaacc caactatggt tatgtctact ctatgttttt tccggttttg gcttgggttt
      421 ggaatcggtg gtgattaccc gctatcggcg acaattatgt ccgagtattc gaataagaaa
      481 acccgaggag ggtttatagc ggctgtgttt gcaatgcaag ggtttgggat tttaggaggc
      541 ggtatttttg cgattattat ttcatcggtg ttcgatgcta aatttaaggc tctgagttac
      601 gaggttgatc cgattggttc aactgtccct gaggccgatt acgtgtggag aattattcta
      661 atggtgggag cggttcccgc aattttgact tattattggc ggatgaagat gcctgaaacg
      721 gctcgttaca ccgccttagt ggcgaaaaac gctaataagg cagctgagga catgtcgaaa
      781 gttttgcaaa tggagatcaa acccgagcaa caaaagatca atcaagtggt cgagaagtca
      841 ggtaacagtt tcgggctttt tactaaggag tttctaaaac gacatgggtt gcatttactc
      901 ggaacaacaa ccacgtggtt tttactcgac atcgcttatt atagtcagaa cttgttccaa
      961 aaggatatat ttaccgccat cgggtggatc ccagccgcaa aaaagatgaa cgcaattcac
     1021 gaggtgtaca gaatcgctag agcccaaaca ctcatcgcgt tgtgcagtac tgtacccgga
     1081 tactggttta ctgtgtttct tattgataaa atcgggcgct ttaaaattca actactcggg
     1141 ttttcaatga tgacaatctt tatgttcgcg ttagcaatcc cttacaacca ttggactcac
     1201 ccgcaaaaca acattgggtt cgtgttgtta tactcgttaa ctttcttctt cgctaacttc
     1261 gggccaaatg caaccacttt tgtggtccca gctgagattt ttccagcccg tttgcggtca
     1321 acttgtcatg gtatttcagc tgcttcggga aagttaggtg cgattgttgg tgctttcggg
     1381 ttcttatatt tggctcagaa tcaagatccg gctaaggcag atgcagggta ccctgctggt
     1441 attggtgtca aaaacgcact gattgttttg ggtgtgatca actttttggg aaccttgtgc
     1501 acgtttttgg tgcccgaatc gaatgggaag tctctcgagg agatgtctag agagaatgaa
     1561 gacgaaccca cagtagttgt ttcgcaagtt taa
//
LOCUS       XM_071831604             960 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841384), mRNA.
ACCESSION   XM_071831604
VERSION     XM_071831604.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..960
                     /gene="LOC139841384"
                     /note="uncharacterized LOC139841384; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841384"
     CDS             1..960
                     /gene="LOC139841384"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687705.1"
                     /db_xref="GeneID:139841384"
                     /translation="MKCVSSTSFSIAINGNIHGFFKGKRGLRQGNPLSPYLFTLVMEV
                     LSLMLQRKAWQIEGFTFHPGCENLKLINLCFADDLFLCAHADIVSVKVIFEALDEFKR
                     CSGLTPSIPKSTVFIIPDNVIKDIEKMLRGFLWCQSEMKRGKAKVKWDNVCRPKYEGG
                     LGYRTSEKVSDIFQNGAWSWLQDWENRVPELCNAVEWAHVIWFSQCIPRHAFMVWLLM
                     GERLKTQDKLKTWEVNHNNILVCSLCKQVEDTHAHLFFSCPYAASICRKGAHMVNMPN
                     WGMDWKLICNSLIPSAGRNKAKIVVAKIMFAAMVYYIWQERNA"
     misc_feature    <52..423
                     /gene="LOC139841384"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    88..90
                     /gene="LOC139841384"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    574..792
                     /gene="LOC139841384"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaaatgtg tttcctctac ttcattttct attgccatca atggtaacat tcatggtttt
       61 ttcaagggta agcgggggct gaggcagggt aatcctctat caccatactt gttcactctc
      121 gttatggaag ttctttctct catgcttcaa agaaaggcgt ggcaaattga ggggttcacg
      181 ttccatccgg ggtgcgaaaa cttgaaactt attaatttat gttttgctga cgatctcttt
      241 ttgtgtgccc atgcggacat tgtttcagtt aaagttattt ttgaagctct tgatgaattt
      301 aaaaggtgtt cgggtcttac gccaagtata ccgaaaagca cagtattcat tattccggat
      361 aatgttatta aagatatcga gaagatgtta cgaggttttc tatggtgtca aagcgagatg
      421 aagcgaggca aagctaaagt taaatgggac aatgtttgtc gtccaaagta tgaaggtggc
      481 ctaggttatc gaacaagtga aaaggtttct gatattttcc agaatggggc atggtcatgg
      541 ctgcaagatt gggagaatag agttcctgag ttatgcaatg ctgttgaatg ggctcacgtc
      601 atttggtttt cccaatgcat tccaagacac gcattcatgg tgtggcttct tatgggagaa
      661 cgcttgaaga ctcaagataa acttaaaact tgggaagtaa accacaataa tatccttgta
      721 tgctctcttt gtaaacaagt tgaagacaca catgcacacc ttttcttttc gtgcccatat
      781 gctgcctcta tatgtagaaa aggtgcgcac atggtaaata tgccgaattg gggtatggat
      841 tggaagctta tttgtaattc tttgattcct tcggcaggta gaaataaggc taagattgtg
      901 gttgcgaaaa tcatgtttgc ggctatggtt tactacattt ggcaagagcg taacgcatga
//
LOCUS       XM_071831605             843 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841385), mRNA.
ACCESSION   XM_071831605
VERSION     XM_071831605.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..843
                     /gene="LOC139841385"
                     /note="uncharacterized LOC139841385; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841385"
     CDS             1..843
                     /gene="LOC139841385"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687706.1"
                     /db_xref="GeneID:139841385"
                     /translation="MYEHCFRLLPGTVRAELVAPNTALSGFSGESVWPIGIIELELEL
                     VDDGNKELMRSTTVEFAVVRSYSKYNALLGRTTLQKLGAIPSTIHGLIKFPTPLGIAT
                     IRSEKKDASVAAVEHAEQQPSEAEQLRSCMIIANPCHPEQKIKIGGGLSDETKFKLRN
                     ILAANTDVFAWKEADMTGVPREIAKHKLNANPSLMPVRQKKRGMAPERSEWLKAEVDK
                     LVKANILREVRYQTWVANPVLVKKPDGSWRMCVDFTDINKACPKDNYPLPEIDWKVES
                     LAGF"
     misc_feature    670..>837
                     /gene="LOC139841385"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtacgagc actgcttccg cttgttgcca gggactgtac gagccgaact agtggctcca
       61 aacactgcat tatcaggatt ctccggcgag tccgtatggc caatcggaat catcgagtta
      121 gagctggaat tggtagatga tggcaataaa gagttaatga ggagcacgac ggtagaattt
      181 gccgtcgtaa ggtcatattc aaagtataat gcgcttttgg ggcgcacgac cttgcaaaaa
      241 ttaggggcaa tcccttccac gatacatggc cttatcaagt tcccaacacc attgggaatt
      301 gcaactatca ggtcagaaaa gaaagatgca agcgttgcag ctgttgaaca tgcagagcaa
      361 cagccgagtg aggcagagca acttagaagc tgcatgatca ttgcaaaccc atgtcatcca
      421 gagcagaaaa ttaaaattgg tggaggattg tctgatgaaa cgaagtttaa gcttcgtaat
      481 atattagccg ccaatacgga cgtatttgct tggaaagaag cagatatgac gggtgtacca
      541 agagaaattg ctaagcataa gcttaatgca aatcctagtc tgatgccggt gcgtcaaaag
      601 aaacgcggta tggcccccga aaggagtgaa tggctgaaag cagaagtcga caagttggtc
      661 aaagcaaaca ttctgcgaga agtaaggtac caaacgtggg tagcaaaccc ggtgctggta
      721 aaaaagcccg atgggtcctg gcgtatgtgt gttgacttca cggatatcaa taaagcatgc
      781 cctaaggata attatccgct gccagaaata gactggaagg ttgagtcttt agccggcttc
      841 taa
//
LOCUS       XM_071831606            1080 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841386), mRNA.
ACCESSION   XM_071831606
VERSION     XM_071831606.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1080
                     /gene="LOC139841386"
                     /note="uncharacterized LOC139841386; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841386"
     CDS             1..1080
                     /gene="LOC139841386"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687707.1"
                     /db_xref="GeneID:139841386"
                     /translation="MSNWFAVMQGQKAKQSFELAPTTEKFVPHIANHPFTVAPVLPLT
                     LGSYDGLSDPDGFLQKFEGTARTHSWGDAVASHMLPIVFQGVAREWFNNLPAQSITGF
                     ADLRSRFLLNFHNLRARKRTHVECHDIKQKLKERLGEIIDRYTKEVAKIQDLPESQKI
                     SGFIHCIDTDRHLSLWQRLRRRVPETFTEAIKETHDYMRAQEDIKQNCRGTSSNMDID
                     DDYYRVQGRGPESGKCYGGNGQLRGGTYHNDKYHKFNNNKGGGSQKFKSGHNENVALI
                     KDLTKTPKEILATEVVSKSFDPPMPLSKYGNRDKSKFCDFHDDYGHETNECRHLIERV
                     AAELKKGRLQHLKKSARSQGDKQKE"
     misc_feature    217..>393
                     /gene="LOC139841386"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atgagcaatt ggtttgcagt gatgcaaggg caaaaagcta agcaaagttt tgagttagcc
       61 cctacaacag aaaagtttgt accgcacatc gctaatcatc ccttcacagt cgcaccggtg
      121 ttgcccctaa cactcggaag ttatgatggg ctatcagatc cagatggttt tttgcaaaaa
      181 tttgaaggaa ccgcaagaac gcacagttgg ggtgatgcgg tagcatccca tatgctacca
      241 atagtatttc aaggagtggc aagagaatgg ttcaataatt tgccagccca aagcattacg
      301 ggttttgcag atttgcgctc aagattcttg ttaaattttc acaatttgcg tgcacgtaaa
      361 agaacgcatg tcgaatgtca cgacattaag caaaaattga aagaaaggtt gggggaaata
      421 atagacaggt atacaaaaga ggtggctaag atacaagatt taccggaaag ccagaagata
      481 tccggcttta ttcattgcat agatacggac agacacctgt ctttatggca acggttaagg
      541 agaagagtgc cagaaacttt cacggaagcc ataaaagaaa cgcatgatta catgcgggca
      601 caagaagata taaagcagaa ctgcagaggt acctcttcaa acatggacat cgatgatgat
      661 tattatcggg tgcagggaag aggtccggag tcaggtaaat gttatggcgg taacggacag
      721 ctcaggggtg gtacctatca caatgataag tatcacaagt tcaacaacaa taaaggggga
      781 ggaagccaga agtttaaaag cggtcacaat gaaaatgtgg cgttaataaa agacctcaca
      841 aaaacaccaa aagaaatttt ggccacagaa gtagtgagta agagcttcga ccccccaatg
      901 cctttgtcaa aatatggaaa cagagacaaa agcaagtttt gtgattttca cgatgattac
      961 ggtcatgaga ctaacgaatg tcggcactta attgaaagag tggctgctga actcaaaaaa
     1021 ggaaggctac aacacttgaa gaaaagtgca agatcgcagg gtgacaaaca aaaagaataa
//
LOCUS       XM_071831607             453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-responsive
            transcription factor ERF098-like (LOC139841387), mRNA.
ACCESSION   XM_071831607
VERSION     XM_071831607.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..453
                     /gene="LOC139841387"
                     /note="ethylene-responsive transcription factor
                     ERF098-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 17 Proteins"
                     /db_xref="GeneID:139841387"
     CDS             1..453
                     /gene="LOC139841387"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     ERF098-like"
                     /protein_id="XP_071687708.1"
                     /db_xref="GeneID:139841387"
                     /translation="MDNNQETCGSGERGRRENKYRGIRRRPWGRYAAEIRDPTRNGAR
                     SWLGTFDTAEEAAGAYDRAAYALRGHQAILNFPNDGHYRNVDPSTVTQSSSSSFSSSM
                     SPMSSSVSILSSRDSNETSEREPVIELEYLDDQLLEDLLGKDSSNKRN"
     misc_feature    55..237
                     /gene="LOC139841387"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(61..66,70..72,76..78,82..84,88..90,100..102,
                     106..108,130..132,136..138,145..147)
                     /gene="LOC139841387"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
ORIGIN      
        1 atggataata atcaagaaac ttgtggaagt ggagaaagag ggaggaggga aaacaagtac
       61 cgaggaattc gacgaaggcc gtggggccgg tatgcagctg agatacgtga tccaactaga
      121 aatggtgcac gttcgtggct tggaaccttc gatacagctg aggaagccgc tggggcttat
      181 gatagagcgg cgtatgcttt aagaggtcat caagccattc ttaatttccc aaatgatggt
      241 cattatcgaa atgttgaccc ttcgacggtt actcagtcgt cgagttctag tttttcttct
      301 tcaatgtccc ccatgtcatc gtcagtttcg atattgtcat ccagagatag taatgaaaca
      361 tccgaacgag agccggtgat cgagttggag tatttggatg atcagctatt ggaagatctt
      421 cttggcaagg attcttctaa taaaagaaat tag
//
LOCUS       XM_071831608             630 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841388), mRNA.
ACCESSION   XM_071831608
VERSION     XM_071831608.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..630
                     /gene="LOC139841388"
                     /note="uncharacterized LOC139841388; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841388"
     CDS             1..630
                     /gene="LOC139841388"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687709.1"
                     /db_xref="GeneID:139841388"
                     /translation="MDEDCINSRRQREKITNKHYYEIECFNTVLDMQIQEFGDRFSEA
                     STELLSCMSALSPRDSFSMFDTSKPIKLCELYPKDFNSTDMIELDYELEMYHHSVRND
                     QKFEDLSEIADLARVMVETRKNISYPLLYWLLKLALVLPVAAATVERCFSAMKIVKSN
                     LRNRIGEEFLNACVICAVEKEALAEVKDEDVMERFHHMPFVEIFLPPMI"
ORIGIN      
        1 atggatgaag attgtattaa ttcaaggaga caaagagaga aaatcactaa taaacattat
       61 tatgagatcg agtgttttaa caccgttttg gatatgcaaa ttcaagagtt cggtgatcgt
      121 tttagtgaag ctagtaccga gttactttct tgcatgtcgg cgttgagtcc acgtgattcg
      181 ttctcgatgt ttgatacgtc gaaaccaata aaattgtgtg aattgtatcc aaaagatttt
      241 aatagtacgg atatgattga acttgattat gaacttgaaa tgtatcatca tagtgtccga
      301 aacgatcaaa aatttgaaga cttgagtgaa attgccgacc ttgctagagt gatggtggaa
      361 acaagaaaaa atatatctta tccgttgctt tattggctat taaagctagc attggtgtta
      421 cccgttgcgg ccgcaaccgt tgagcgatgt ttttcggcaa tgaaaattgt aaagtcgaac
      481 ctacgcaatc gtattggaga ggagttcctc aatgcttgtg taatttgtgc agtcgaaaaa
      541 gaagctctag ccgaagttaa agatgaagat gtaatggagc gttttcatca tatgcctttt
      601 gttgaaatct ttttaccccc gatgatctag
//
LOCUS       XM_071831609             729 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841389), mRNA.
ACCESSION   XM_071831609
VERSION     XM_071831609.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..729
                     /gene="LOC139841389"
                     /note="uncharacterized LOC139841389; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841389"
     CDS             1..729
                     /gene="LOC139841389"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687710.1"
                     /db_xref="GeneID:139841389"
                     /translation="MLKDEERNFGPKPFKIFDAWLMKMVLIKLSMMPRPLLPVNNLKG
                     CMFRNRLKNVKIALKERSNKNFINLDDEIEAIKGATLSLELKTETSSLNENERLMWRE
                     SRKKWLEKERLKSNMLKKKARIKWVIEGEENTNCFHSITHRKNNKSNITGLTINGVWN
                     DSLKEIKEEIFTHFKSVFEEPNIERPSMEELSYPYESVDNASALEDPTMKKKSEMMFL
                     FVRVLKHPGQMGSIYIFSRSSEKP"
ORIGIN      
        1 atgttaaagg atgaagaaag aaattttggt ccaaaacctt ttaagatatt tgatgcttgg
       61 ttaatgaaga tggtattgat caagttatca atgatgccta ggccacttct tccggtaaat
      121 aatctaaagg gttgcatgtt ccggaatagg ttaaagaatg ttaagattgc tttgaaagaa
      181 cggagtaata aaaattttat taatctggac gatgaaattg aagcaataaa aggtgctaca
      241 ctcagcctag aactaaagac tgaaaccagt tcgctcaacg aaaatgaaag attgatgtgg
      301 agagaatcta gaaagaagtg gctagaaaaa gagagactta aatcgaatat gctcaaaaaa
      361 aaagctcgca ttaaatgggt gatagaaggt gaagagaaca caaattgttt tcactcaata
      421 acccatagga aaaataacaa aagcaacata acaggcttaa ctattaatgg tgtttggaat
      481 gactctctta aagagattaa ggaggaaatt ttcacacact tcaagagtgt ttttgaagaa
      541 ccaaatatcg agagaccaag tatggaagaa cttagctatc catatgagtc agttgataat
      601 gcttcggcat tagaggatcc cacaatgaaa aagaaatccg agatgatgtt tttgtttgtg
      661 agagtactta agcacccggg ccagatgggt tcaatataca ttttttcaag aagctctgag
      721 aaaccataa
//
LOCUS       XM_071831610             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841390), mRNA.
ACCESSION   XM_071831610
VERSION     XM_071831610.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139841390"
                     /note="uncharacterized LOC139841390; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841390"
     CDS             1..861
                     /gene="LOC139841390"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687711.1"
                     /db_xref="GeneID:139841390"
                     /translation="MANHSFDIVIGIVEDILDIIDTLVFLVDFVIMEMKEDLQVPLIF
                     GRPFLATADTIILVQRNQLNIGVGEECITMNIREVMKQPSNTNDDECYALDYIDFYVD
                     KELEKLFGVDTTGFNQICDNDIVDLEADFRELMNVNVDESEIEFLLLQEFDIEIRDKK
                     GAENVAADHLSRLDNPELQPLDESKIRDTFPDEHLMRIDLVDEVPCFADFENYLASNV
                     LQKGLSYQQKKKFFNDLWYNFWEDPHLFRIGVDQVIRRCVYGQEARDILKSCHSGPTG
                     EGAFWAESHR"
     misc_feature    <439..519
                     /gene="LOC139841390"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggccaacc attcatttga cattgttatt ggtatcgtcg aggacatctt ggatatcatt
       61 gacaccttgg tgttcctagt tgattttgtt atcatggaga tgaaggagga tcttcaagtt
      121 cctctcatct ttggaagacc atttcttgcg accgctgaca ccatcatctt ggtacaacgc
      181 aatcaactca acattggagt cggtgaagag tgtattacca tgaatatccg ggaagttatg
      241 aagcaaccga gcaacaccaa tgatgatgag tgttatgccc ttgactatat tgacttttat
      301 gtagataagg agcttgaaaa gctttttggg gttgatacca cggggttcaa ccaaatttgt
      361 gataatgaca ttgtggattt agaggccgac tttagggaat tgatgaatgt taatgttgat
      421 gaaagtgaaa ttgaattcct tttattacaa gagttcgata tagaaataag ggataaaaag
      481 ggagccgaga atgttgcggc cgatcacttg tcaaggctag ataatcccga gcttcaacct
      541 ttagacgagt ccaaaattcg ggatactttc ccggatgaac atttaatgag gattgatcta
      601 gtcgatgaag ttccatgttt tgccgatttt gaaaactact tggcctcaaa tgttttacaa
      661 aaaggtttgt cataccaaca aaagaaaaag tttttcaacg atttatggta taacttttgg
      721 gaagacccac acttgttccg cattggggtg gatcaagtaa ttcggagatg tgtatatggg
      781 caagaagccc gagatatttt gaaaagttgt catagtggac caaccgggga gggggcattt
      841 tgggccgaat cacaccgcta a
//
LOCUS       XM_071831611             702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841391), mRNA.
ACCESSION   XM_071831611
VERSION     XM_071831611.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139841391"
                     /note="uncharacterized LOC139841391; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841391"
     CDS             1..702
                     /gene="LOC139841391"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687712.1"
                     /db_xref="GeneID:139841391"
                     /translation="MQMPVYFVSKALSGSEVNYPPIEKLVYALVHTARRLRRYFQAYP
                     IVVLTDQPIIQPEVSRRLAKWAIELGEHEINYSPRTAIKGKILADYLAETMGEVEALA
                     ENGACGPEGDGAGLVLTSPDGEKHTYALRFMFVVTNNESKYEALLSGMRIAQQLGIKH
                     LDAYVDSQLVVNQVNGSFGAHEASMQRYMELVHELANEFDVFRLMQVPRGQNKKADAL
                     RKLAAMAFDHLRKNV"
     misc_feature    <10..273
                     /gene="LOC139841391"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    313..669
                     /gene="LOC139841391"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(313..321,409..417,424..426,496..498,616..618,
                     658..660)
                     /gene="LOC139841391"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgcaaatgc ctgtgtattt tgtcagcaaa gcacttagcg gtagtgaagt taactaccca
       61 cctattgaaa agctcgtgta tgcgctagta catacagctc gtcggcttcg cagatacttt
      121 caggcgtatc caatagtggt gttaactgat caaccgataa tacagcctga ggtttcgcgt
      181 agactggcca aatgggctat tgaattggga gagcatgaaa tcaattactc cccgcgcacg
      241 gcgataaaag gcaagatact tgcagattat ttagctgaaa caatggggga agtagaagca
      301 ctcgcagaaa atggagcttg tgggcccgaa ggcgatggcg ctggactggt tctcacaagc
      361 cccgacggag agaagcatac ttatgcactt cgattcatgt ttgtggtgac caataatgag
      421 tctaaatatg aagcgttact gtctgggatg cgcatagcgc aacaactcgg aataaagcac
      481 ttggacgcgt atgttgactc acagttagtc gtaaaccagg taaatggatc gtttggagca
      541 catgaagcct ctatgcagcg gtacatggaa ctggtgcatg aattagcaaa tgagtttgat
      601 gtttttagat tgatgcaggt accaaggggg caaaacaaaa aagcagatgc actgagaaaa
      661 ttggctgcaa tggctttcga tcatctgcgc aaaaatgtgt ga
//
LOCUS       XM_071831612             969 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841392), mRNA.
ACCESSION   XM_071831612
VERSION     XM_071831612.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..969
                     /gene="LOC139841392"
                     /note="uncharacterized LOC139841392; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841392"
     CDS             1..969
                     /gene="LOC139841392"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687713.1"
                     /db_xref="GeneID:139841392"
                     /translation="MTPLVKFLTEGELPADEKEARKVRIKALMYALIEGVLYRKSYLG
                     LSLLCIGPNQAKSVLREVHEGFCALHSGYRMIAAKVMHIGYYWPSIYSDAAEVVRTCQ
                     SCQQNAPISRAPRHPMVPKTAAWPFSKWAIHIVGPITTCSGGIKFLVVATDYFTKWVE
                     AKALATITGRRIRNFFWEDIVCSTGETPFSLVYGTETVISTELIAPTKRIRSFDESSN
                     DEGLRANLDMLEERREIATIREAINKQKISKYYDKRIKPMSFRVGDYVWCNNEASQTE
                     NTGKLVLEWEGPYEVIGMSATGSYILAGLNGERIPRTWHATNLKRC"
     misc_feature    148..327
                     /gene="LOC139841392"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgacaccat tggtgaaatt cctaactgag ggcgaactcc cggcagacga aaaagaagcg
       61 cgaaaggtcc gcattaaagc tctcatgtat gcgttaatcg agggtgtttt atacaggaaa
      121 tcttatttag gcctaagcct gttatgcatt ggacctaatc aagctaaatc ggtgcttcga
      181 gaagttcatg aaggcttttg tgctttacac tctgggtaca gaatgattgc tgcaaaggtg
      241 atgcatatag ggtattattg gccctccatt tacagcgacg cagcagaagt tgtgaggaca
      301 tgccaatcat gtcaacagaa cgcgccaata agtcgagcac cacgacaccc aatggtacca
      361 aaaacagcag catggccgtt cagcaagtgg gccatccaca ttgtcggtcc tattactacg
      421 tgctcaggag gaataaaatt cttggtggtg gcaactgatt atttcaccaa gtgggtggag
      481 gcaaaggcat tggcaacaat taccggcagg cgcatccgta acttcttttg ggaagatatt
      541 gtgtgcagca caggagaaac accgttcagc ttggtctacg gaactgaaac agtgatctcc
      601 acagaattaa tagctccaac aaagcgcata cgcagctttg acgagtcaag taatgatgaa
      661 ggcttacgcg ctaatctaga tatgctagaa gagcgcagag aaatagctac catacgagaa
      721 gcaattaaca agcagaagat ctctaagtac tacgacaagc gcattaagcc tatgtcattc
      781 agggttggag attatgtgtg gtgtaacaat gaagcaagtc aaacagagaa tactggaaag
      841 ctggtactag aatgggaagg tccttatgaa gttattggaa tgagtgcaac ggggtcctat
      901 atcctggcag gattaaatgg agaacgaata ccccgcactt ggcatgcaac caatttgaaa
      961 agatgttaa
//
LOCUS       XM_071831613             705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841394), mRNA.
ACCESSION   XM_071831613
VERSION     XM_071831613.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..705
                     /gene="LOC139841394"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841394"
     CDS             1..705
                     /gene="LOC139841394"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687714.1"
                     /db_xref="GeneID:139841394"
                     /translation="MIDCKLAETPMILNQKLYMEDEAKLADKGQYQRMVGKLIYLVHT
                     RPDIAHAVGVVSQFMHQPQDHHMEAVFRIIRYLKKTVDHGVVFKRNGHLKTQIYTDAS
                     WAGEKGDRRSTSGFFTLVGVNLVAWRSKKQKVVSLSSAESEFRGIAKGVVEALWIKKL
                     LTEIGFPPKEAIQIYCDNEAPIAISENPVQHDRTKHVEIDRHFIRENLDDEIISLPSI
                     RSEDQLADILTKSVNG"
     misc_feature    286..702
                     /gene="LOC139841394"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(298..309,412..420,427..429,529..531,607..609,
                     688..690)
                     /gene="LOC139841394"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgattgact gcaaactagc agaaactcct atgattctaa atcaaaagct atatatggaa
       61 gatgaagcta aacttgctga caaagggcaa taccaaagga tggtgggaaa actcatctac
      121 ctcgtccata ctcggccaga cattgcacat gcagtaggag ttgtgagcca attcatgcac
      181 caaccacagg atcatcatat ggaagcagta tttagaatca tcagatactt aaagaaaaca
      241 gtggatcatg gggtcgtttt caaaaggaat ggacatctaa agactcagat ttacactgat
      301 gcaagctggg caggagagaa aggagatagg agatctacat ccggattctt tacacttgtc
      361 ggggttaatc tagtggcatg gagaagtaag aaacaaaaag ttgtctcact ctcaagcgcc
      421 gagtcagaat ttagagggat agcaaaagga gtagttgaag ccctatggat caagaagttg
      481 ttaactgaaa ttggttttcc tccaaaagaa gcgattcaaa tctactgcga taatgaagca
      541 cctatcgcta tctcagaaaa ccccgttcaa catgatcgta ctaaacatgt ggagattgac
      601 cgacacttta tccgagaaaa tttggatgat gaaatcatct ccctcccatc tatcagatca
      661 gaagaccaac ttgctgatat tctcaccaaa tctgtcaacg gatga
//
LOCUS       XM_071831614             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin-induced protein
            22E-like (LOC139841395), mRNA.
ACCESSION   XM_071831614
VERSION     XM_071831614.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139841395"
                     /note="auxin-induced protein 22E-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139841395"
     CDS             1..570
                     /gene="LOC139841395"
                     /codon_start=1
                     /product="auxin-induced protein 22E-like"
                     /protein_id="XP_071687715.1"
                     /db_xref="GeneID:139841395"
                     /translation="MDLKTSCNLNLFENIDLATELRLGLPGTDDQPEIKTCLSGNKRS
                     SSDMGSSTCTDENELRFLPPTKEQVVGWPPVRSNRKNILQGKKMESGMYVKVSMDGAP
                     YLRKLDLKMYTSYKELLKGLQEMFKCSIGLYSERGGYNGSQHAPTYEDKDGDWMLVGD
                     VPWEMFISSCKRLRIMKSCEARGLGDDAL"
     misc_feature    52..555
                     /gene="LOC139841395"
                     /note="AUX/IAA family; Region: AUX_IAA; pfam02309"
                     /db_xref="CDD:460529"
ORIGIN      
        1 atggatctaa agacaagctg caatttgaat ctttttgaga atattgatct tgcaaccgag
       61 ctcagattag ggttgccggg aaccgatgac cagccggaga taaaaacatg tctttccggc
      121 aacaaaagga gttcatcgga tatgggatca agcacatgca cagatgaaaa tgaattaaga
      181 tttttaccac ccacaaagga acaagttgtg gggtggccgc cggtgagatc taaccggaaa
      241 aacattcttc aagggaagaa gatggaatca ggaatgtatg tgaaagtaag tatggatgga
      301 gctccatatt tgagaaaact agacctcaaa atgtacacaa gttataaaga attattgaag
      361 ggtttacaag agatgtttaa gtgcagtata gggttgtact ctgaaagagg agggtacaat
      421 ggatcacagc atgcaccaac ttatgaagat aaagatggtg attggatgct tgttggagat
      481 gtaccatggg agatgtttat aagttcttgt aaaagactta gaattatgaa gagttgtgaa
      541 gctagagggt tgggtgatga tgctttataa
//
LOCUS       XM_071831616             579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841396), mRNA.
ACCESSION   XM_071831616
VERSION     XM_071831616.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..579
                     /gene="LOC139841396"
                     /note="uncharacterized LOC139841396; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841396"
     CDS             1..579
                     /gene="LOC139841396"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687717.1"
                     /db_xref="GeneID:139841396"
                     /translation="MKVGDNKSIGDGASTSFWYETWLGDIPFNTRFKRLVRLECNLEV
                     SVKDKLSWDGNKCSANLEWTRTPTGRANGELQELTELLKSVKFNADVSDSWIWKASQN
                     GKFTTKKLTTLINEKTMSASQSVKGTLSNKLVPKKVKIFIWRARKGRIPVRTELDKLG
                     IDFHSVRCPLCDDDIESVEHSLLSCKKVYDVW"
     misc_feature    <391..555
                     /gene="LOC139841396"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaaggttg gggacaacaa gtcaattggg gacggtgcct ctacttcttt ttggtacgag
       61 acttggctag gtgatattcc tttcaatacc cggttcaaaa gattggtgag attggaatgt
      121 aacttggagg tctcggtcaa agacaagtta tcatgggatg gcaacaaatg ttcggcaaat
      181 ctggaatgga cgagaacacc aacaggtcgc gcaaatggcg agttgcagga gctaaccgag
      241 ctgctgaaat cagtgaagtt taatgcagat gtttcagatt cgtggatttg gaaagcgagc
      301 caaaatggga agttcacaac caaaaagctt actactttga taaacgaaaa aacgatgagt
      361 gcaagccaaa gtgttaaagg aactttaagc aataaattag ttcctaaaaa agttaaaatc
      421 tttatttgga gagctaggaa aggtcgaata ccggtgcgta cggaacttga taaactgggg
      481 attgattttc actcggttcg ttgtccgctt tgtgacgacg atatcgagtc ggtagagcat
      541 tccctattgt catgtaaaaa agtttatgat gtgtggtga
//
LOCUS       XM_071831617             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841398), mRNA.
ACCESSION   XM_071831617
VERSION     XM_071831617.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139841398"
                     /note="uncharacterized LOC139841398; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139841398"
     CDS             1..501
                     /gene="LOC139841398"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687718.1"
                     /db_xref="GeneID:139841398"
                     /translation="MAPPSPFDVNGRHYERGYYLGDGIYPDWAMLVKAPHNSIDEPRK
                     KFKRFQESARKDIERAFGVLHGRFSMLKTPARSKDFNKIRRHMYACIVLHNMIQENNG
                     FAIGRREERMIERNPPRRLQQDLRDRDARVKEIRDKQVHQQLEADLTEHIWNLSPYFR
                     SANNNE"
     misc_feature    <4..306
                     /gene="LOC139841398"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggctccac cttcaccatt tgatgtcaac gggcgtcact acgaaagagg gtattaccta
       61 ggcgatggta tatacccaga ttgggccatg ttggtaaaag cgcctcataa ttcaattgac
      121 gaaccacgta aaaaatttaa acgttttcaa gaaagtgcaa ggaaagatat tgagcgtgca
      181 tttggagtat tacatggtag attttcaatg ttaaagactc cggcgagatc taaagacttc
      241 aacaaaatta gaagacatat gtatgcttgt attgtattac ataacatgat tcaagaaaat
      301 aacggttttg ctattggaag gagagaagaa agaatgatag aaaggaaccc accacgaagg
      361 ttgcaacagg atttgaggga tcgagatgca agggttaagg aaataagaga caagcaagtt
      421 caccaacagt tagaggcaga tttaaccgag cacatttgga acttatcacc ttactttcgg
      481 tccgctaata ataatgagta a
//
LOCUS       XM_071831618             375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841399), mRNA.
ACCESSION   XM_071831618
VERSION     XM_071831618.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..375
                     /gene="LOC139841399"
                     /note="uncharacterized LOC139841399; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841399"
     CDS             1..375
                     /gene="LOC139841399"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687719.1"
                     /db_xref="GeneID:139841399"
                     /translation="MRKSTKQDIARLCSAHEEKHEFKGILCSIDCINWEWKNCPNGWK
                     GQYTKGDQKLPKILLEVVASYDLWICHAFFAMEDSNNDLNVLNQSTLCDELKRGIAPP
                     ASFNVNGHHYTKGYYLVGDIYP"
     misc_feature    1..>372
                     /gene="LOC139841399"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagaaagt cgacaaaaca agacattgca cgtttatgta gtgcacatga agagaaacac
       61 gagtttaaag ggatattatg cagtattgat tgtataaatt gggagtggaa aaattgtccc
      121 aatggatgga aaggacaata tactaagggt gatcaaaaac ttcctaagat cttgcttgaa
      181 gttgttgctt catatgattt atggatatgt catgcatttt tcgcgatgga ggattcgaac
      241 aatgatttaa atgtcttgaa ccaatctact ttgtgtgatg aacttaagag aggaattgct
      301 ccacccgcat catttaatgt caatggacat cactatacca aagggtatta cctagtagga
      361 gatatatatc cataa
//
LOCUS       XM_071831619            1869 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841400), mRNA.
ACCESSION   XM_071831619
VERSION     XM_071831619.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1869
                     /gene="LOC139841400"
                     /note="uncharacterized LOC139841400; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841400"
     CDS             1..1869
                     /gene="LOC139841400"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687720.1"
                     /db_xref="GeneID:139841400"
                     /translation="MKKHRREGDDGNERWNGSRRGIILVRASVLDGDIDIKIMQTRRT
                     FTDAQVDEMISQRVNEALAAAEARRVQANASQARGSSGNNVPQRCTYKEFSNCKPQTF
                     TGIEGPVSLMRWFERLESVFRISNRANTDRVKFATCTLQDGALTWWNNYAQPAGMDES
                     YAMPWEEFKQAMISEYCPRNEIQKLEMELWNLKIQGNDITRYTKRFLELSLLCPELVT
                     TEAKKIERYVWGLLKEIQGNVTSSKPETLQSAIRMAHNLMDQITRHENPEATTYTKTQ
                     GGKRKWNENQGNSSHQKKQDTTKFENANAKKNYNGKKPYCNRCYKHHYGACTIVCDRC
                     KKVGHMSKDCTVNLAQPTGNKPKTCYGCGQVGHMKNQCPNAKKDGNAKGRAFNISAKG
                     ARENPDLVTGTFLLNNCIAYVLFDSGADRSFISKDFSTVINIPPTALDTKYIIELANG
                     KTLKVDKIFQGCALTLADKLFEVDLMPVELGSFDVIIDLPGLPPHRQVEFQIDLIPGA
                     APVARPPYRLAPSELQELSNQLQELLDKGFIRPSSSPWGAPILFIQDFSKIARPLTTL
                     THKGKKFEWLKEQESAFQQLKHKLTTAPILSLPEGNEDFVVYCDASRQGLGCVLMQ"
     misc_feature    400..693
                     /gene="LOC139841400"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
     misc_feature    853..>1119
                     /gene="LOC139841400"
                     /note="Arginine methyltransferase-interacting protein,
                     contains RING Zn-finger [Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; Region: AIR1; COG5082"
                     /db_xref="CDD:227414"
     misc_feature    <991..1191
                     /gene="LOC139841400"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    1141..>1461
                     /gene="LOC139841400"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1246..1248,1252..1254,1258..1260,1333..1341,
                     1456..1458)
                     /gene="LOC139841400"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1246..1254
                     /gene="LOC139841400"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1246..1248
                     /gene="LOC139841400"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1333..1344,1354..1365)
                     /gene="LOC139841400"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1528..>1701
                     /gene="LOC139841400"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1723..>1866
                     /gene="LOC139841400"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atgaaaaaac accgtcgtga gggggacgat gggaatgaac ggtggaatgg aagccggaga
       61 ggtatcattt tggtgcgggc gtcggtgctt gatggtgata tcgacatcaa gataatgcaa
      121 acacgaagga cttttactga cgctcaagtt gacgagatga ttagtcaaag ggttaatgaa
      181 gctttagccg ctgctgaggc acggagagtg caagctaatg cgagtcaagc tagaggttca
      241 agtggaaata atgttccaca aagatgtacc tacaaggagt tctccaactg caaacctcaa
      301 actttcactg gaatagaagg accggttagt ttgatgaggt ggtttgagag gctcgagtca
      361 gtctttcgaa taagcaaccg tgcaaatacg gatagagtaa agtttgctac ttgtactctt
      421 caagatggtg ccctgacatg gtggaacaat tatgctcagc ctgcaggaat ggacgagtcg
      481 tatgcaatgc catgggaaga attcaaacaa gcaatgatca gtgagtattg tccaagaaac
      541 gaaattcaga aactagaaat ggaattgtgg aatttgaaaa ttcaggggaa tgacattacg
      601 agatatacaa aacgattcct agaactttcc ctattgtgtc cggagttagt tactactgaa
      661 gcaaagaaga tcgaaaggta tgtgtgggga cttttgaaag aaatccaagg taatgtaacg
      721 tcatccaaac cagaaacact ccaaagtgct attcgaatgg cacacaacct aatggatcag
      781 attacacgtc atgaaaaccc ggaagcaaca acatatacaa aaactcaagg cggtaagcgt
      841 aagtggaacg agaaccaagg aaatagttct caccagaaga aacaagatac caccaagttt
      901 gagaatgcta atgccaagaa gaattataat ggcaagaaac cttattgcaa tcgatgttat
      961 aagcatcatt atggagcttg tactattgtt tgtgataggt gcaaaaaggt ggggcatatg
     1021 tccaaagatt gtacagtcaa tctcgcacag ccaactggaa acaaacctaa aacttgttat
     1081 ggatgtggac aagtgggaca catgaagaat cagtgtccga atgccaagaa ggatggaaat
     1141 gcaaaaggta gagcatttaa tatctcggca aaaggagctc gtgaaaatcc tgatttagtc
     1201 acgggtacat ttcttctaaa caactgcatt gcttatgtac tatttgatag tggtgctgat
     1261 agaagtttta tttctaaaga ctttagtacc gtaattaaca tacctccaac tgctttagat
     1321 actaagtata tcatagaatt ggctaatggc aaaactttga aagtagataa gatctttcaa
     1381 ggttgtgctc taacgttagc tgataaacta tttgaagtcg atcttatgcc tgttgagtta
     1441 ggtagttttg atgttattat tgatttacct ggtcttcctc cacataggca agttgaattt
     1501 caaattgact taattccggg agctgcacct gttgctcgac caccgtatcg attagcacct
     1561 tcagaattgc aagagttgtc gaaccaatta caagaactgt tggataaggg atttattcga
     1621 cctagttcat caccctgggg tgctcctatc ttgtttatcc aagatttttc aaagattgcg
     1681 cgacctttaa ctacactgac tcacaaagga aagaagtttg aatggttaaa ggaacaagag
     1741 tctgcatttc aacaattgaa gcataaacta actactgcac ccatattatc tttacctgag
     1801 ggaaatgaag attttgtggt ttattgtgac gcctcgcgtc aaggacttgg atgtgttttg
     1861 atgcagtga
//
LOCUS       XM_071831621             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841402), mRNA.
ACCESSION   XM_071831621
VERSION     XM_071831621.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139841402"
                     /note="uncharacterized LOC139841402; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841402"
     CDS             1..846
                     /gene="LOC139841402"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687722.1"
                     /db_xref="GeneID:139841402"
                     /translation="MTWINWNQVLAPFNKGGLNVGSLNAFNLALLLKWKWRFLIDDKA
                     LWVKVIKSIHGDGVGHAAPRLVNRGVWSSICSSWHFLHDQNIISNHVFQKKIGDGSNT
                     KLWKDMWLGDCSLTSKFNVLFALEIDSDCKIADRFFDGAWHWNWSRPLTSCCHLASLE
                     ELNAMVSSFSLSENADSRLWSMSKEGIYRVKDGRRIIDDHCLPSIDHQTRWVSTLPRK
                     VDIFVWRVDLDKLPSRLNLSKKGLEIPRINCSTCGFCVESTNHALFECQLLVKYGRGF
                     NFGLM"
ORIGIN      
        1 atgacttgga ttaattggaa tcaagttctc gctcccttca ataaaggtgg tcttaatgtg
       61 gggagtttaa atgctttcaa tttggcgctc ttattaaaat ggaaatggag atttttgatt
      121 gatgataaag cattgtgggt aaaagttata aaatcaattc atggagatgg tgttggtcat
      181 gcagctccta gacttgttaa tcgtggggtt tggagttcca tttgttcatc atggcatttc
      241 ttacatgatc aaaatatcat ttccaatcat gtttttcaga aaaagatagg tgatggatca
      301 aatacaaagt tatggaaaga tatgtggctc ggagattgtt cacttacgtc caagtttaat
      361 gtactatttg ctcttgaaat cgatagtgat tgtaagattg cggacagatt ttttgatggt
      421 gcgtggcatt ggaattggtc tcggccatta acttcatgct gtcatcttgc ttcattggaa
      481 gagttgaatg ctatggtaag ttcgttttcg ttgtcagaga atgcggactc tcggttgtgg
      541 tctatgtcaa aggaaggtat ttatagagtg aaagatggca gaaggattat tgacgatcat
      601 tgcttacctt cgatagatca tcagactcgt tgggtttcta ccttgccccg caaagtcgac
      661 atctttgtat ggagggtaga tttggacaag cttccttcgc gacttaatct ttcaaaaaaa
      721 ggtttagaaa ttcctcgtat taattgttct acttgcggtt tttgtgttga gtccactaat
      781 catgctttgt ttgagtgtca attgctcgtc aagtatggtc gaggattcaa ctttggacta
      841 atgtag
//
LOCUS       XM_071831622             663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841403), mRNA.
ACCESSION   XM_071831622
VERSION     XM_071831622.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..663
                     /gene="LOC139841403"
                     /note="uncharacterized LOC139841403; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841403"
     CDS             1..663
                     /gene="LOC139841403"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687723.1"
                     /db_xref="GeneID:139841403"
                     /translation="MPTKIDITDLPWDPADRKKILDYDPNQRDEIRRLYMQRGPCQPR
                     GNLFPTKTVCSKDRRFVVTWFDEYRWLEYSVKADKAYCLWCYLFRDQVGKQRGSDAFV
                     TDGFSNWNKKDRLKLHEGDVNSFHNKAHQKCEDLMKPKQSIAAVFHRQSDIEKQEYRI
                     RLQSSIDAVRYVMHNALPFRGHDESEDSINRGIFLETLKLISSQNENARNAISKAPKN
                     CK"
     misc_feature    295..>654
                     /gene="LOC139841403"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atgccaacaa aaattgatat aaccgatcta ccttgggatc ccgcagacag aaaaaagatt
       61 ttggactatg accctaatca aagagatgaa attaggagac tttatatgca aagaggacct
      121 tgtcaaccac gtggaaattt gtttcccaca aaaacggtat gctccaaaga tagacgcttt
      181 gtcgtaactt ggtttgatga atatcgctgg ttagagtata gtgtaaaggc agataaggca
      241 tattgtttgt ggtgttacct attcagagat caagttggaa aacaacgtgg gagtgatgca
      301 tttgtgaccg atggctttag taattggaac aaaaaagata gattaaaact tcatgagggt
      361 gatgttaaca gttttcacaa taaagcacat caaaaatgtg aagatctaat gaagccaaag
      421 caatcaatag ccgctgtttt tcatagacaa tctgatattg agaagcaaga gtatcgaatt
      481 cgattacaaa gttcaattga tgctgttaga tatgtaatgc ataacgcatt accatttcgt
      541 ggtcatgacg agagtgaaga ctccataaat agaggaattt tcttggaaac attgaagtta
      601 atttcaagtc aaaatgaaaa tgcccgtaac gcgatatcaa aagctccaaa gaattgtaag
      661 taa
//
LOCUS       XM_071831623            1902 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase TIO-like (LOC139841404), mRNA.
ACCESSION   XM_071831623
VERSION     XM_071831623.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1902
                     /gene="LOC139841404"
                     /note="serine/threonine-protein kinase TIO-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841404"
     CDS             1..1902
                     /gene="LOC139841404"
                     /codon_start=1
                     /product="serine/threonine-protein kinase TIO-like"
                     /protein_id="XP_071687724.1"
                     /db_xref="GeneID:139841404"
                     /translation="MFTSIAFLQSFLDIKKSLDNNGSRFGDSYIRHWVAIVELYKEIT
                     RCAEDGSGRLAYESIACIRSILSSVAQGLKGSMATKHDEVAPNTLKKILDHAKALGVI
                     DDLIFCLITCGTSLMSGSSNFLRAACEVCEAIWSLIDAFENQSTKENTYYEKIVEAVT
                     QAFLRSEAMRVAIFYCLRQRMVASWSSVIQIILRCSLHNESVARVLYGLSSSSSVVGG
                     GGDNTIISEVFSIISLCASFDTDLQQPGDTNNLKTKVFDLNDLVLQSCLLVASVAQSI
                     DDRSKGYTAVIMLTSSPETQQSRLSDLAYHYSSCDGKQNLRPHSMYAMLALACMCSLE
                     NNESVATSIREIVIPLIPPCATLCDYLKMSKTDPQGDGTGKNMLSYWHGLRDGCTLLL
                     CFRLIWGGPLAIQDMGGCDIPKCLIDLLGNKHSDEIGLSPLGVKWTTASLMQCFKRGG
                     RSVFRQVLFASENVKILCDLISNVHLKLLRYWVGPGGEKSGVTDTVDRVVYLLSFPFE
                     ACEESSELRDMDMVIEIKASMDKYIQILFEVGLPGPIIKCLEHLELKDTVTSLHLLTK
                     MVDHHSLVVEHVEELVGNGLLNPHLMRRLLDDSSPTQIKLSALIIISEVAKMDKTCLP
                     EKSEYSVLE"
ORIGIN      
        1 atgtttacat ctattgcctt tttacagagt ttcttagata taaagaagtc actggataac
       61 aatggaagtc ggtttggaga ttcgtatatc aggcattggg ttgctatagt tgaactctat
      121 aaagagatca ctcgttgcgc tgaagatgga tccgggagac ttgcatatga atctattgcc
      181 tgcattagaa gtatattatc tagtgttgca caaggtctga aaggttccat ggccaccaaa
      241 catgatgagg tggctccaaa cactcttaaa aagatattgg atcatgctaa agctttaggt
      301 gtcatagatg atttgatttt ttgcttaata acttgtggta ctagtctcat gtctggctcc
      361 tcaaattttt tacgtgctgc ttgtgaagta tgtgaggcta tttggtcact aatagatgct
      421 tttgagaatc aatcgacaaa agaaaatacc tattatgaaa aaatagtaga agcagtgaca
      481 caagcattcc tcaggtccga agctatgcgg gttgctatct tctattgtct tcgccagcgc
      541 atggtcgcct catggtcttc tgtaattcag ataatcttaa ggtgcagctt gcataatgaa
      601 tcggttgcta gagttttata tggtctctct agttcctcct cagtggttgg tggaggtggt
      661 gataatacaa tcatttcaga ggttttttca ataatatctc tttgtgcttc attcgataca
      721 gatcttcaac aaccaggaga cacaaacaac ctgaaaacta aagtatttga tttaaatgac
      781 ttggttcttc agtcgtgcct attagtagcc tcagttgcac aatccataga tgatcggtct
      841 aaaggatata ccgcggttat tatgcttaca tcgtcccctg aaacgcagca gtcacgcctc
      901 tctgatctgg cctaccatta ttcttcgtgt gatggaaaac agaatcttcg accccattca
      961 atgtatgcca tgctggcact tgcatgcatg tgctcccttg aaaataatga gtccgttgca
     1021 acatcaattc gtgaaatagt cattcctttg ataccaccgt gtgccacact ttgtgattat
     1081 ctaaagatgt caaaaacaga ccctcaagga gatggtactg gtaaaaatat gctctcgtac
     1141 tggcacgggc tcagggatgg gtgcacactt ttgttgtgtt tcagattaat ttggggcggg
     1201 cctttagcta ttcaggacat gggtgggtgt gatatcccta aatgtcttat tgatctgtta
     1261 ggaaacaagc attcagatga aattggacta tcacctcttg gggttaagtg gacaactgct
     1321 tcattaatgc agtgttttaa acgtggtggt aggtcagttt ttcgccaggt gttgtttgca
     1381 agtgaaaatg taaaaatcct ctgtgatttg atatctaatg tccatcttaa gcttttacgg
     1441 tattgggttg gacctggtgg agagaaaagt ggagtcacgg atacagttga tcgagtagtt
     1501 tatcttttga gttttccgtt tgaggcttgt gaggagagta gtgaacttcg agacatggat
     1561 atggttattg aaataaaagc aagcatggat aagtatattc aaatactttt tgaggtagga
     1621 cttcctgggc caataatcaa gtgtttggaa catttggagt tgaaggatac tgtaacatct
     1681 cttcacctac taaccaagat ggtagatcat cattcactgg ttgtagaaca tgttgaagaa
     1741 cttgttggga acggtctctt aaatccacat ttaatgagaa ggttacttga tgattcatca
     1801 ccaactcaaa tcaagttgag cgcccttata ataatttcag aagtagctaa aatggacaag
     1861 acgtgtctgc ctgaaaagtc agagtactct gtgttggagt aa
//
LOCUS       XM_071831624            1647 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841405), mRNA.
ACCESSION   XM_071831624
VERSION     XM_071831624.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1647
                     /gene="LOC139841405"
                     /note="uncharacterized LOC139841405; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841405"
     CDS             1..1647
                     /gene="LOC139841405"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687725.1"
                     /db_xref="GeneID:139841405"
                     /translation="MDRIDRTKWMYDKGWTSTDYLKRLDEFITFVETNQLNKGSNVII
                     CPCKKCMNGKSFKDSTDIRNHLIINGFMRGYTCWSYHGESLTVHNPGSSDSNQLNEED
                     SYISDNDNFEAMFEDIEDNVDEKYHEKFEQLKVDSEKPLYSSCTKFSKLSAVIKLLNL
                     KENNGWSDTSFTSLLELLHKMLPEDNELPVSTYYAKKLMCPMRLEIQRIHACPNDCML
                     YRNENENLHECKVCSTSRYKRGKLSDEDSDENGPPAKVLWYFPIIPRLKRLFANAKTA
                     KLLRWHAEESKKDGKIRHVADSVQWRTIDNEFEDFGNEIRNIRLGLSSDAMNPFGDLS
                     SSHSTWPVLLCIYNLPSWLCMKRKHIMLSLLIQGPKQPRNDIDVYLAPLIDELKLLWD
                     TGVQVYDSYKKEYFHLRAMLFCTINDFPAYGNLSGYTTKGKKACPVCEKNTHSIWLKN
                     CRKPAFMGHRRELAVSHPYRSKKDLFDGTVEKSVLPPRLDGKTIFKIVKKLKVVLGKT
                     GNGPPKGMWKKKIHILGITVLEAFARPTLSRCYAYREKCL"
     misc_feature    22..249
                     /gene="LOC139841405"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    865..1497
                     /gene="LOC139841405"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atggatcgga ttgatcggac taaatggatg tacgacaaag gatggactag caccgactat
       61 ctgaaacggc ttgatgaatt tataaccttt gtggagacta atcaattaaa taaaggaagc
      121 aatgtaatca tttgtccttg taaaaaatgt atgaatggga agtccttcaa ggattctacc
      181 gatatcagaa atcatcttat aataaacgga tttatgagag ggtacacgtg ttggtcttat
      241 cacggtgaat cattaaccgt tcataaccca ggctcttcag attccaatca attaaacgaa
      301 gaagattcat acattagtga taacgataat tttgaggcca tgtttgagga tattgaggat
      361 aatgttgacg aaaagtatca tgagaaattt gaacaactta aagttgactc tgaaaaaccg
      421 ttatacagca gttgtacgaa attttcaaaa ctttctgccg tgataaaact gttaaatcta
      481 aaagaaaata atggttggag tgacacaagt ttcactagct tgttagagtt gttgcataaa
      541 atgctccccg aagataatga gttgccggtt tcaacatact atgccaagaa attgatgtgc
      601 ccgatgagat tggaaataca aagaatacat gcatgtccaa atgattgtat gctatacagg
      661 aatgaaaatg aaaaccttca tgagtgtaag gtatgtagta catctaggta taaacgtgga
      721 aaactatctg acgaagacag tgacgaaaat ggacctcctg caaaagtatt gtggtatttc
      781 cctatcatac caagattgaa gaggttattt gcgaatgcca aaactgcaaa attattacgt
      841 tggcatgcgg aagagagtaa aaaggatgga aaaataagac atgtggccga ttcagttcaa
      901 tggagaacaa ttgataacga atttgaagac tttgggaatg agatacgaaa tattaggttg
      961 ggacttagtt cagatgcaat gaatcctttc ggagatttga gtagcagtca tagcacgtgg
     1021 cctgttttgt tatgcattta caaccttcca tcttggctat gtatgaaacg aaaacacata
     1081 atgctatccc ttttaattca aggcccaaaa caacctagaa atgacattga tgtttatttg
     1141 gcaccgttga ttgatgagtt aaagttacta tgggataccg gtgtacaagt ctatgattca
     1201 tacaagaaag agtacttcca tctacgggca atgctttttt gcaccattaa cgattttcca
     1261 gcgtatggta atttatctgg atatactacg aaagggaaaa aggcatgtcc tgtttgtgag
     1321 aaaaatactc actcgatatg gttgaaaaat tgtaggaaac cagcatttat gggacataga
     1381 agagagctcg ctgtgagtca cccttatcgc tccaaaaaag acttatttga tggtactgta
     1441 gagaaaagcg ttctaccgcc acgattggat ggaaaaacta ttttcaaaat agttaagaag
     1501 ctaaaagttg tgttgggaaa aaccggtaat ggtccaccga aagggatgtg gaaaaaaaaa
     1561 atccatattt tgggaattac cgtattggaa gcatttgcgc gtccgacatt gtctagatgt
     1621 tatgcatatc gagaaaaatg tttgtga
//
LOCUS       XM_071831625             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein DOG1-like 3
            (LOC139841408), mRNA.
ACCESSION   XM_071831625
VERSION     XM_071831625.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139841408"
                     /note="protein DOG1-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841408"
     CDS             1..780
                     /gene="LOC139841408"
                     /codon_start=1
                     /product="protein DOG1-like 3"
                     /protein_id="XP_071687726.1"
                     /db_xref="GeneID:139841408"
                     /translation="MIENNNNHRNHNFHRFFDWWLGELNINLQHLISAANHQHNFEDD
                     SVLLPLIDKVVGHYENYYKVKSNGAKRDVISMFAPTWLTSLENSLLWIAGWRPTTAIH
                     LLYSKSGIQLEAKLADLVPVLTDDLSDLSIIQINRIDELHKETIREERIISESLALMQ
                     ESVADTLMVDLSNSISEKMRNDKDDDGEIRDIDLEVELMFNLKKGELEEVLHKADSLR
                     IETLKAVVAILTPIQVVYFLIAAAELHLRIHDWGQKMDKTT"
     misc_feature    82..315
                     /gene="LOC139841408"
                     /note="Seed dormancy control; Region: DOG1; pfam14144"
                     /db_xref="CDD:464092"
ORIGIN      
        1 atgatcgaaa acaacaacaa tcaccgcaat cacaatttcc accgattttt cgattggtgg
       61 ctaggtgaac tcaacattaa ccttcaacat ctcatttcag ctgcaaacca tcaacataat
      121 ttcgaagacg attcagtttt actcccactt attgataaag ttgtaggtca ttatgaaaac
      181 tactataaag tcaaatcaaa tggagcaaaa cgtgacgtga tttcgatgtt tgcaccaaca
      241 tggttaacct cacttgaaaa ttcattattg tggattgctg gatggaggcc aacaactgca
      301 atccatttat tgtactcgaa atcgggtatt cagcttgagg ccaaactggc tgatctggtg
      361 ccagttttga ccgatgattt aagcgatttg agtatcatac aaatcaatcg aattgatgaa
      421 ttgcataagg aaacgattcg tgaagagagg attattagtg agagtttggc acttatgcaa
      481 gaatcagtgg ctgatacgct catggtggat ttatctaact cgatttcaga gaagatgagg
      541 aacgataagg atgatgatgg agaaattagg gacattgatt tagaggttga attgatgttt
      601 aatttgaaga agggtgagtt ggaagaggtg ttacacaagg cggatagttt gagaatcgag
      661 acattgaagg ccgtggtggc gattttgaca cctatacagg tggtgtactt tttaatcgct
      721 gcggctgaac tccatcttag gatacacgat tggggacaga agatggacaa aaccacttaa
//
LOCUS       XM_071831626             852 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/FBD/LRR-repeat protein
            At1g13570-like (LOC139841409), mRNA.
ACCESSION   XM_071831626
VERSION     XM_071831626.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..852
                     /gene="LOC139841409"
                     /note="F-box/FBD/LRR-repeat protein At1g13570-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 14 Proteins"
                     /db_xref="GeneID:139841409"
     CDS             1..852
                     /gene="LOC139841409"
                     /codon_start=1
                     /product="F-box/FBD/LRR-repeat protein At1g13570-like"
                     /protein_id="XP_071687727.1"
                     /db_xref="GeneID:139841409"
                     /translation="MPVTSAKTDSLSKLPDNLVDSILERLPIQDVVRTSILSRNWRYK
                     WTTMWSLVLDKRFSNKLAKNDAFGYNGFIRVTNQLFHFLKGPIVKVHLHIPKIVLDSF
                     QEVDQWILSLSRDGVRELFFKNSNKNYQLPSYLFECSELRRLELNNCIFKPPLEFRGF
                     LSLSDLRLENITFGENLSGTIIKLPQLKKLSLVRCRNVYNFNIVAIKLQFLMVMRCFD
                     AMFLRLLRSRGLTRVYLLSFKPITLVQRVNLATILSKMPYLVSLSMDGCFLKKIFPSG
                     FQAQLID"
     misc_feature    31..138
                     /gene="LOC139841409"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(40..45,49..57,64..69,76..78,109..117,121..123,
                     130..132)
                     /gene="LOC139841409"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438931"
     misc_feature    order(40..42,52..54,61..66,73..78,88..90,94..99,109..117,
                     121..123)
                     /gene="LOC139841409"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438931"
ORIGIN      
        1 atgcctgtaa catctgccaa aacggatagt cttagtaaat tgccagacaa cttggtagac
       61 tctatcttag agcggctccc tattcaagat gttgtgagga ctagcattct atcaagaaac
      121 tggaggtaca aatggactac aatgtggtca ctggttctcg ataagcgttt ctctaataag
      181 ttggccaaaa atgatgcttt tggttataat gggtttataa gggtaacaaa tcaactcttt
      241 cactttctta agggtccaat cgtgaaggtg catcttcaca taccaaaaat tgttcttgat
      301 agcttccaag aagtcgatca atggatttta tcgttgtcaa gagacggtgt tagggaactt
      361 ttctttaaaa attctaataa aaattaccaa ctcccatcat atttgtttga gtgttcagaa
      421 ttgagaaggt tagaacttaa taactgtatc tttaagcctc cacttgagtt tcgaggattt
      481 ctctctcttt cagatctccg gctcgagaat attacatttg gggagaattt aagtggaact
      541 atcatcaagt taccgcaact taaaaaattg agtctggttc gatgcaggaa cgtttacaat
      601 tttaacatcg tggctataaa gctgcaattt ttaatggtca tgagatgctt tgatgccatg
      661 tttcttcggt tattgcgtag tcgagggctt actagggttt atttactctc cttcaaaccc
      721 attacactag ttcaaagagt aaatctagcc acaattttaa gtaagatgcc ctatcttgtg
      781 tctttatcta tggatggttg ttttctcaag aaaatatttc caagtggctt ccaggcgcag
      841 ctaatagatt ag
//
LOCUS       XM_071831628            1068 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase SRK2A-like (LOC139841410), mRNA.
ACCESSION   XM_071831628
VERSION     XM_071831628.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1068
                     /gene="LOC139841410"
                     /note="serine/threonine-protein kinase SRK2A-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 86 Proteins"
                     /db_xref="GeneID:139841410"
     CDS             1..1068
                     /gene="LOC139841410"
                     /codon_start=1
                     /product="serine/threonine-protein kinase SRK2A-like"
                     /protein_id="XP_071687729.1"
                     /db_xref="GeneID:139841410"
                     /translation="MDKYEVVKDLGSGNFGVARLMRHKETKDLVAMKYIERGLKIDEN
                     VAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFDRICTAGRFSEDEARY
                     FFQQLISGVSFCHSMQICHRDLKLENTLLDGSRAPRLKICDFGYSKSSLLHSRPKSTV
                     GTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDPADPKNFRKTITRIMG
                     IQYKIPDYVHISQECKRLLSRIFVANPARRITIKEIKNHPWFLKNLPRELMESTQTNY
                     YQKDNPSFSLQSVDEIMKIVAEARNPPPSSRSVGYFGWGSEEEEDEEKEEEVDVEEEE
                     EDEYEKRVKEVHASGEFNNLI"
     misc_feature    7..777
                     /gene="LOC139841410"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Sucrose nonfermenting 1-related protein kinase subfamily
                     2; Region: STKc_SnRK2; cd14662"
                     /db_xref="CDD:271132"
     misc_feature    order(28..42,52..54,91..93,97..99,181..183,229..240,
                     250..252,256..261,265..267,364..369,373..375,379..384,
                     388..390,424..429,436..438,478..492,496..498,586..597)
                     /gene="LOC139841410"
                     /note="active site"
                     /db_xref="CDD:271132"
     misc_feature    order(28..39,52..54,91..93,97..99,181..183,229..240,
                     250..252,379..384,388..390,424..429)
                     /gene="LOC139841410"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271132"
     misc_feature    order(250..252,256..261,265..267,367..369,373..375,
                     379..381,436..438,478..492,496..498,586..597)
                     /gene="LOC139841410"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:271132"
     misc_feature    order(424..459,469..492)
                     /gene="LOC139841410"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:271132"
ORIGIN      
        1 atggacaaat atgaggtggt gaaggatctt gggtcgggaa acttcggtgt tgcgaggctt
       61 atgagacata aagagactaa agatctcgtt gcaatgaaat acatcgaacg cggtctaaag
      121 attgatgaaa atgtggcaag agaaattata aaccatagat cgcttcgaca tcctaatatt
      181 atccgattca aggaggttgt attgacgcca acccatttag caatcgtcat ggagtatgct
      241 gctggtggcg agctatttga tcgcatctgc actgcgggga gatttagtga agacgaggca
      301 aggtatttct tccaacaact aatctcaggg gtctcctttt gccattccat gcaaatatgt
      361 catcgagatt tgaagctgga aaatacacta ttagatggaa gccgagcacc tcgtctcaaa
      421 atctgcgact ttggttattc aaagtcatca cttttacatt caagacccaa atcaactgtt
      481 ggaactccgg cttacatcgc ccctgaagtt ctatctcgtc gagagtacga tggcaagttg
      541 gcggatgtgt ggtcgtgtgg tgtgacactt tatgttatgc ttgtgggtgc atatcctttt
      601 gaagatccgg ctgaccctaa aaacttcaga aaaaccatta cacgtattat gggcattcaa
      661 tacaagatcc cagactatgt tcacatatcc caggaatgca aacgacttct atcgcgcata
      721 tttgttgcaa atcctgcacg gaggattact ataaaagaaa taaagaatca tccatggttc
      781 ttaaagaatt taccaagaga gctgatggaa tctacacaaa ccaactatta tcaaaaagat
      841 aacccgagtt tttcccttca aagtgtcgat gagatcatga agatcgtggc agaggcgaga
      901 aaccctccac catcgtcacg atcggtcggg tatttcggtt ggggatcaga agaagaagaa
      961 gacgaagaaa aagaggagga agttgatgta gaagaagaag aagaagatga atatgaaaag
     1021 agggtaaaag aggttcatgc tagtggtgaa tttaataatt taatataa
//
LOCUS       XM_071831629             687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841411), mRNA.
ACCESSION   XM_071831629
VERSION     XM_071831629.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..687
                     /gene="LOC139841411"
                     /note="uncharacterized LOC139841411; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841411"
     CDS             1..687
                     /gene="LOC139841411"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687730.1"
                     /db_xref="GeneID:139841411"
                     /translation="MGRICLKRRLYRLNKSRKVAFPVIQNYVTNVWRKYGVEKIMMNG
                     KGFFFFKFSSESGMMDVHQNGPWMICNDPIILNKWSLNVSLTKEDLSKVPVWVKIYDI
                     PLAGFTEDGLSVIASKFGRPMMFDSYTSTMCTEAWGRPNFARAMIEVSADRDLREQLK
                     VVTPNLDGMSNTIDIVRVEYEWKPPCCSCCCVFGHIDFQCPKSIIVGESKEKQTDDDG
                     FRLVSKKAKK"
     misc_feature    46..432
                     /gene="LOC139841411"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
ORIGIN      
        1 atgggacgta tttgtttaaa aagaagactt tatcgtctaa ataagtctag aaaggttgct
       61 tttcccgtta ttcagaatta tgttacgaat gtatggcgta aatatggtgt tgagaagata
      121 atgatgaatg gtaaaggttt cttcttcttt aagttctcgt ccgagagtgg tatgatggat
      181 gtgcatcaaa atggcccgtg gatgatatgt aatgatccaa ttatattgaa taaatggtct
      241 ctgaatgtgt cgttaacaaa ggaggatctt tcaaaggttc cggtttgggt taagatttat
      301 gatattccat tagcagggtt tacggaagac ggcctaagtg tcattgcttc gaagtttggt
      361 aggcctatga tgtttgattc atatacaagc actatgtgta cggaggcgtg gggtagaccc
      421 aactttgctc gagccatgat tgaggttagt gctgatcgtg acttgcgaga acaactaaag
      481 gttgtgactc ctaacttaga tgggatgagt aacacgatcg atatagtgcg agtggaatat
      541 gaatggaagc caccatgttg ctcttgttgc tgcgtttttg ggcatattga tttccaatgt
      601 cccaagtcga taattgtggg ggaaagcaag gaaaaacaaa ccgatgatga tggctttcgg
      661 cttgtgtcta aaaaggcaaa aaaatag
//
LOCUS       XM_071831630             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841412), mRNA.
ACCESSION   XM_071831630
VERSION     XM_071831630.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139841412"
                     /note="uncharacterized LOC139841412; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841412"
     CDS             1..462
                     /gene="LOC139841412"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687731.1"
                     /db_xref="GeneID:139841412"
                     /translation="MGERLKPQDKLKSWEVHNGMVLVCPLCKVCADTHNHLFFDCSYS
                     RQVWLKAQALTHLPCLHNWRSLVSCISPSASRNSVRGVVAKLVFAVSVYFIWQERNNR
                     IFKKSHRTEVKLFEDVIATVRLKLLSIKFKVSADVDHMKKLCLCSVCYLIF"
     misc_feature    <25..141
                     /gene="LOC139841412"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggtgagc ggttaaaacc tcaagataag cttaaatctt gggaagttca taatgggatg
       61 gtgcttgtat gccctctttg taaggtttgt gcggatactc acaatcattt gttttttgat
      121 tgttcctact ctcggcaagt gtggttgaaa gctcaggctt tgacgcatct tccttgtttg
      181 cataattgga ggtctcttgt ttcgtgtatc tcaccttctg cctctcgtaa ttcagtaaga
      241 ggtgttgttg ctaaattggt ttttgcggtt tcggtgtact tcatatggca agaaagaaat
      301 aacaggattt ttaagaagtc tcacaggacc gaggttaagc tgtttgaaga tgtgattgca
      361 accgttcgtc tgaagttgct gtccattaaa tttaaagttt cagctgatgt tgatcatatg
      421 aagaagctgt gcctatgtag tgtttgctat ttaatatttt ga
//
LOCUS       XM_071831631             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841413), mRNA.
ACCESSION   XM_071831631
VERSION     XM_071831631.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139841413"
                     /note="uncharacterized LOC139841413; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841413"
     CDS             1..462
                     /gene="LOC139841413"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687732.1"
                     /db_xref="GeneID:139841413"
                     /translation="MGERLKPQDKLKSWEVHNGMVLVCPLCKVCADTHDHLFFDCSYS
                     RQVWLKAQALTHLPCLHNWRSLVSCISPSASRNSVRGVVAKLVFAVSVYFIWQERNNR
                     IFKKSHRTEVKLFEDVIATVRLKLLSIKFKVSADVDHMKKLCLCSVCYLIF"
     misc_feature    <25..141
                     /gene="LOC139841413"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggtgagc gtttaaaacc tcaagataag cttaaatctt gggaagttca taatgggatg
       61 gtgcttgtat gccctctttg taaggtttgt gcggatactc acgatcattt gttttttgat
      121 tgttcctact ctcggcaagt gtggttgaaa gctcaggctt tgacgcatct tccttgtttg
      181 cataattgga ggtctcttgt ttcgtgtatc tcaccttctg cctctcgtaa ttcagtaaga
      241 ggtgttgttg ctaaattggt ttttgcggtt tcggtgtact tcatatggca agaaagaaat
      301 aacaggattt ttaagaagtc tcacaggacc gaggttaagc tgtttgaaga tgtgattgca
      361 accgttcgtc tgaagttgct gtccattaaa tttaaagttt cagctgatgt tgatcatatg
      421 aagaagctgt gcctatgtag tgtttgctat ttaatatttt ga
//
LOCUS       XM_071831632            2101 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TOM1-like protein 5
            (LOC139841414), mRNA.
ACCESSION   XM_071831632
VERSION     XM_071831632.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2101
                     /gene="LOC139841414"
                     /note="TOM1-like protein 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841414"
     CDS             1..2055
                     /gene="LOC139841414"
                     /codon_start=1
                     /product="TOM1-like protein 5"
                     /protein_id="XP_071687733.1"
                     /db_xref="GeneID:139841414"
                     /translation="MAVNAESSVTPFHDYVALHPPGRPWLDGGSPWANVVSHGRGLLV
                     SHASWVWTADQGKPNGLWNPRGKAVGQGRMAAWSEIEASSSSNNDPIEGFWVLFWFDS
                     TTATQQEAADDGELQLYRLTNGADGLRCRLGLWRVIVEVDGTLGSVLGDTNVTLEVKS
                     VSRRENVAANEGVNLSAQGVKSVGVHLLLEVVVVLIVVVKTLEDGLLACPCYDKRCEK
                     LCLKSWRFSRDYNVPFECDCALLFDVNATEYVCDLKQKVMIVLDMAAELVNAATNEKL
                     AEMDWTKSIEICELVAHDHRQARDVIKAIKKRLGSKSKETQLYAVMLLEVLMNNIGEP
                     IHTQVIDTGILPVLVKLVKKKSTSDLPVREKIFLLLDATQTSLGGASGRFPQYYSAYY
                     DLVSSGVQFSQRPEVVPKPRSTSDRSKSNSGNGEVSTNGHDRSAPPPPPPANVTRVVP
                     ESSIIKKAGSSLEVLTDVLDAIDVRHPEEAKDEFTLDLVEQCSFHKQQVMHLAVTSRD
                     ERTISKAVELNDQLQKALSRHDALVSGRSVPAYTQIDQEDAEEEDQEQLFRRMRKGKT
                     CVRPEAENYQTERHLGLLGSSVPPDRLNRPLIRPISLEPKQEPTATRSTVARASAATA
                     TETAAAGVVIPPPPVKHVEREKFFQEYKTDGSALGGHMRGLSLHSRNASSSRSDSFDF
                     SD"
     misc_feature    790..1182
                     /gene="LOC139841414"
                     /note="VHS (Vps27/Hrs/STAM) domain family; Region: VHS;
                     cd03561"
                     /db_xref="CDD:340765"
     misc_feature    order(841..846,853..855,865..867,985..990)
                     /gene="LOC139841414"
                     /note="putative intraprotein/interprotein binding site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:340765"
     misc_feature    1360..1596
                     /gene="LOC139841414"
                     /note="canonical GAT domain found in uncharacterized
                     Golgi-localized gamma ear-containing Arf-binding protein
                     (GGA)-like proteins mainly found in plants; Region:
                     GAT_GGA-like_plant; cd14231"
                     /db_xref="CDD:410579"
     misc_feature    order(1366..1371,1378..1383,1387..1392,1399..1404,
                     1411..1413,1450..1452,1459..1464)
                     /gene="LOC139841414"
                     /note="putative ubiquitin binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:410579"
ORIGIN      
        1 atggccgtca atgcagagtc gtctgtcact ccatttcacg attatgttgc tttacatccg
       61 cctggtaggc cttggctgga tggtggcagt ccgtgggcca atgtcgtatc gcatggccgt
      121 gggcttctgg tgagccatgc ttcatgggtg tggactgctg accaaggtaa gccaaatggc
      181 ttgtggaatc caaggggaaa ggccgtgggc caaggccgta tggctgcctg gtcagaaata
      241 gaagccagta gcagcagcaa caacgaccca attgaggggt tttgggtctt gttttggttc
      301 gacagcacaa cagcaacaca gcaggaggct gcagatgatg gcgaattgca gctgtataga
      361 ctgacgaatg gggctgatgg tttacgatgc aggctgggac tgtggagggt tattgttgaa
      421 gtcgatggca ctttgggatc tgttttgggc gatacaaatg tgacactcga agttaaatca
      481 gtgtcgagac gagaaaatgt tgctgctaat gaaggagtaa atttgtcggc tcagggtgtt
      541 aaaagtgtag gtgttcattt gttgctcgag gtggttgtgg ttctaattgt ggtggttaag
      601 acactcgaag acgggctgtt agcgtgcccg tgttacgaca aaagatgcga gaagttatgc
      661 ctcaaatctt ggagattttc tcgagattat aacgtccctt ttgaatgtga ctgtgcttta
      721 ctttttgatg taaatgctac tgaatatgtt tgtgatctaa aacaaaaagt gatgatagta
      781 ttagacatgg cagctgaact tgtgaatgca gcaactaatg aaaagttagc agaaatggat
      841 tggaccaaaa gcatcgaaat ttgtgaatta gttgcgcatg atcacaggca agctagagat
      901 gtcattaaag cgatcaaaaa acggctggga agtaaaagca aagaaactca gttatatgct
      961 gttatgttgc tagaggtgtt aatgaacaat attggagaac caattcatac acaagtaatt
     1021 gacactggga tccttcctgt acttgtcaaa ttagttaaga aaaagtccac ttctgatctg
     1081 cctgtacggg agaaaatatt tcttcttcta gatgcaacac agacatctct cggtggagct
     1141 tccggaagat tccctcaata ctactctgca tactatgatt tggtgagttc tggagtacaa
     1201 ttctctcaga gacctgaagt tgttcccaaa ccccgttcga cttccgacag aagtaaaagc
     1261 aactccggta atggtgaagt ttccaccaat ggacatgacc ggagtgcacc accaccacca
     1321 cctcccgcaa atgttacgcg ggttgttcct gaatctagta tcatcaaaaa agctggatct
     1381 tcactagaag tgttgacaga cgtacttgat gccattgatg tcagacatcc tgaggaagcc
     1441 aaggatgagt tcaccctaga tctcgtggag cagtgttcat ttcataaaca acaagttatg
     1501 catcttgctg ttacctctcg ggatgagcgg acaatatcta aagcagtcga gttaaatgat
     1561 cagctccaaa aggcactttc aagacatgat gctctcgttt ctggtaggtc agtccctgca
     1621 tatacccaaa ttgaccaaga agatgcagag gaagaggacc aggaacaact cttcagaaga
     1681 atgaggaagg gaaaaacgtg tgtaagacct gaggccgaga attatcaaac agagcggcat
     1741 ttaggactac tagggtcatc agttccccct gataggctta accgaccttt aattaggccc
     1801 atcagtttgg agccaaaaca agaacctact gcaacccgat caactgtagc tcgagcttca
     1861 gctgcaactg caactgaaac tgctgctgca ggtgttgtaa tcccaccgcc gcctgtaaaa
     1921 catgttgaaa gggagaaatt ctttcaagaa tacaaaacgg acggttctgc acttggcggt
     1981 cacatgcggg gtctctcttt acacagccgt aacgccagca gttctcgcag tgacagtttc
     2041 gacttcagcg actgattaaa tgggtttcga atttttgttg atgatataga ggtttaatga
     2101 t
//
LOCUS       XM_071831633             900 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841416), mRNA.
ACCESSION   XM_071831633
VERSION     XM_071831633.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..900
                     /gene="LOC139841416"
                     /note="uncharacterized LOC139841416; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841416"
     CDS             1..900
                     /gene="LOC139841416"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687734.1"
                     /db_xref="GeneID:139841416"
                     /translation="MHSIETRRDLHQLKNDKVRIRVKCFELGVNDENEPIFPWTLLVF
                     KGKNVDTWLVETLDEIHTCQQKKELRQCTSTFLSKQIGDTIVTDPDLKVAAIQDIMSK
                     KCELGIKKSTVYRAKAKAKNVIVGDYMKQYLKLRDYCLELQKRNPNTTTRIQVHHEPN
                     FNSDSRVFKRAYICLGLLKEGFRACQREILGLDGAFLKGPYTCQLLSAVGVDPNNGIY
                     PLAYAGLLPALAKVYPSAEHRFCVRHIYENMRGSYKEGVIKDLVWKCATRTTIAEYDA
                     TMDELRRKSEGAYNYLKDIAPHH"
     misc_feature    565..744
                     /gene="LOC139841416"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgcattcaa ttgaaactag aagggacttg catcagctga agaatgataa ggtaaggata
       61 agggttaaat gttttgaatt aggggtaaat gatgaaaatg agccaatttt cccatggact
      121 ttactagttt tcaagggtaa gaatgtggat acatggttag tagagaccct agatgaaatt
      181 catacctgtc aacaaaaaaa ggaacttaga caatgcacat ctacttttct gtccaaacaa
      241 attggtgata caatagttac agatcctgat ctcaaagtag ctgcaattca agatattatg
      301 tctaaaaagt gtgagttagg aatcaagaaa agcactgttt atagggcaaa ggctaaggca
      361 aagaatgtta tagttggtga ttatatgaaa caatatttaa agcttagaga ttattgtttg
      421 gagttgcaaa agagaaatcc caatacaaca accagaattc aagttcatca tgaacctaat
      481 ttcaactcag atagtagggt gtttaaaaga gcttacattt gtttgggtct ccttaaagaa
      541 ggatttaggg cttgtcaaag agagatttta gggcttgatg gtgcatttct aaaaggtcct
      601 tatacatgtc aacttttgtc agctgttgga gttgatccta acaatggaat atatccttta
      661 gcatatgcag gtctcttacc agctttggct aaagtttatc ctagtgctga gcatagattt
      721 tgtgtcaggc atatctatga aaacatgaga ggatcgtaca aagagggtgt aataaaggac
      781 ttggtatgga aatgtgcaac caggacaact atagctgaat atgatgctac aatggatgaa
      841 cttagaagga aaagtgaagg tgcatacaat tacttgaagg atattgcacc acatcattag
//
LOCUS       XM_071831635             954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841417), mRNA.
ACCESSION   XM_071831635
VERSION     XM_071831635.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..954
                     /gene="LOC139841417"
                     /note="uncharacterized LOC139841417; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841417"
     CDS             1..954
                     /gene="LOC139841417"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687736.1"
                     /db_xref="GeneID:139841417"
                     /translation="MPKEILLQERVARSFPDSQPLAENSRRDKSKFCIFHDDYGHDTN
                     HCRDLAELIAEAFEQGKLDHLIAQGAANTANAIILPAESNAPQVLNAADRKAPAVKNL
                     GVKMVGKKENLREIQVINVVEVQGEMSMFQVSEQFANWQCPSITIPPINLSADHDKPV
                     VVSCRIANTGIIILKVHVDTGSSVDVMYEQCFNNLPAHIKALLKPTAVSLAGFSGEST
                     WPIGQLELQVELVDDRDESLKSQALLKLYVMRNQSRFNMILGRTALRMFGAIPSTLHG
                     MVKFFSYKGIGTLTSAVIELLSAMITVRESVGVEGHAVLAE"
     misc_feature    484..795
                     /gene="LOC139841417"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(535..537,541..543,547..549,628..636,772..774)
                     /gene="LOC139841417"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    535..543
                     /gene="LOC139841417"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    535..537
                     /gene="LOC139841417"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(628..639,649..660)
                     /gene="LOC139841417"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcctaaag aaattctttt gcaagaaagg gtggcgagat cttttcctga ttcccaacct
       61 ttagcagaga acagcaggcg cgacaaatca aagttctgca tttttcatga tgactatggt
      121 catgatacta atcactgtag ggatttggca gaactgattg cggaggcatt tgagcaaggt
      181 aaattggacc atttgatagc tcaaggtgct gcaaatactg caaatgcgat tatcttgccc
      241 gcagagtcta atgctccaca agtgctaaat gccgctgatc gaaaagctcc cgcagtgaag
      301 aatttggggg ttaaaatggt gggcaaaaaa gagaatttgc gcgaaattca agttattaat
      361 gtagtggagg ttcaaggtga aatgtcaatg ttccaagtat ctgagcaatt cgcaaattgg
      421 caatgcccat ctattactat tcctccaata aatttgagcg cggatcatga taaaccagtg
      481 gtggtttcat gtcgcattgc gaatactggc attataattt taaaagtaca tgttgatact
      541 ggtagcagtg tagatgtaat gtatgagcaa tgttttaaca acttgcctgc acatatcaaa
      601 gctttgctaa aacctactgc ggtttcgcta gctggttttt ctggagaatc aacttggccc
      661 attggtcagt tggaattgca agttgaattg gtagatgatc gcgatgaatc actaaaaagc
      721 caagccttgt taaaacttta tgtaatgcga aatcagtcta ggtttaacat gattcttggg
      781 cgcactgctt tgcgtatgtt tggtgcaata ccatccacgt tgcatggaat ggtgaagttt
      841 tttagttaca agggcattgg tacgctgact tcggcagtaa ttgagctact ttctgcgatg
      901 attacggtgc gagaaagtgt tggtgttgaa gggcatgcgg tgctcgctga atag
//
LOCUS       XM_071831636             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841418), mRNA.
ACCESSION   XM_071831636
VERSION     XM_071831636.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139841418"
                     /note="uncharacterized LOC139841418; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841418"
     CDS             1..837
                     /gene="LOC139841418"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687737.1"
                     /db_xref="GeneID:139841418"
                     /translation="MVNLNHYLYGQTASLNAMNRMKSILSTTEKEDKKKPSTHSFQRL
                     WDNLVNYNENYATIMFYPKNRKTGPKAVFLPEASPLTISEYFVHGLIDTLYIDGRTIH
                     EIKELPQRMQEAITRYRDNFAKEREIFLRMHSSYPIFNEDQQLLVPSFTIAYLGVSNG
                     NYPTRDEALKIIPTIDHLVSSLAGVYFGSSKIGNGQEQQENVRINYVHKNVLIYSSTI
                     EKIDEKGLNLINNFEEPFEAFTGQLSALPEDIKRRLCKQISRAPRYSCEYCQEKDTFL
                     AS"
ORIGIN      
        1 atggttaatc ttaaccatta tctttatggt caaacagcaa gtctaaatgc catgaatagg
       61 atgaaaagta ttctctctac aacagaaaaa gaagataaga agaaaccatc cacacacagt
      121 tttcaaaggt tatgggataa ccttgttaat tacaacgaaa attacgcaac aattatgttc
      181 tatcccaaaa ataggaaaac tggccctaaa gcagttttct taccagaagc atcaccatta
      241 acaatatcag aatatttcgt ccatggatta attgatacct tatatatcga tggaagaaca
      301 attcatgaaa tcaaggaact ccctcaaaga atgcaagaag caataactag atacagagac
      361 aattttgcaa aagaaagaga aatatttctc agaatgcatt caagctaccc aatatttaac
      421 gaagaccaac agttacttgt cccatcattt acaatagcat atctcggagt aagcaatggt
      481 aattatccaa caagagacga agcattaaaa ataattccaa caatcgatca tctggtgtca
      541 tcattagcag gagtctattt cggatcctca aaaataggaa atggccaaga acagcaagaa
      601 aatgtgagaa tcaattacgt tcacaaaaat gtcttaatct actcaagcac tattgaaaaa
      661 attgatgaaa aaggtctcaa tctaatcaac aattttgaag aaccctttga agcattcaca
      721 ggacaacttt ctgctcttcc agaagatata aaaaggcgtt tatgtaaaca gatatccagg
      781 gcaccaaggt acagttgcga atactgtcaa gaaaaagaca cattcctagc atcataa
//
LOCUS       XM_071831637             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 78-like (LOC139841419), mRNA.
ACCESSION   XM_071831637
VERSION     XM_071831637.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139841419"
                     /note="secreted RxLR effector protein 78-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841419"
     CDS             1..462
                     /gene="LOC139841419"
                     /codon_start=1
                     /product="secreted RxLR effector protein 78-like"
                     /protein_id="XP_071687738.1"
                     /db_xref="GeneID:139841419"
                     /translation="MVLSSRMKTVDYLKHKRVKSLIFMVDFEKAFDSLNWDFLMEIME
                     IMGFGVKWRKWILSCLHSASISALVNGSPTNEFKFKRGVRKGDPLSPFLFILAAEGLN
                     VLTKSVVASNSFKGVEIGRDKIPISHIQYADDTIFFGEWSIDNIRNLMKLL"
     misc_feature    <31..>459
                     /gene="LOC139841419"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(76..93,253..258,391..393,397..402)
                     /gene="LOC139841419"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(76..93,253..255,397..399)
                     /gene="LOC139841419"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    256..258
                     /gene="LOC139841419"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggtgctct catcgcgaat gaaaacggtg gactatttga aacataaaag ggttaaaagc
       61 ttgattttca tggtggattt tgagaaggcg tttgatagcc taaattggga ctttctcatg
      121 gagattatgg aaatcatggg atttggtgtg aaatggagga agtggattct ttcttgccta
      181 cactcggctt ctatttcggc tcttgttaat gggtcaccaa ctaacgaatt taaattcaaa
      241 cgtggggtta ggaaaggtga cccattgtca ccttttcttt ttattttggc agctgaagga
      301 ctaaatgtgt tgacaaaaag tgtcgttgct agtaatagtt ttaaaggcgt tgaaattggt
      361 cgggataaaa taccaatctc tcatatccaa tatgcggatg acacaatctt cttcggggaa
      421 tggagtattg ataacatacg aaacctcatg aaactcttat aa
//
LOCUS       XM_071831638            1784 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841420), mRNA.
ACCESSION   XM_071831638
VERSION     XM_071831638.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1784
                     /gene="LOC139841420"
                     /note="uncharacterized LOC139841420; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841420"
     CDS             87..1604
                     /gene="LOC139841420"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687739.1"
                     /db_xref="GeneID:139841420"
                     /translation="MPLLDSLTAILLLLLLRVIYIHASVHIYAGNKFERKGNAFVIHG
                     GSEGIYYSHPNLNDSATSSNGDAYIRFEKIVFRRPQEVSNFSTGLIYAILFEMDDRET
                     IGGSAYGGQRAICCTADLAKLGACKEGEIIHRLSTTNPGWPDVFGVSFDINEETSTME
                     PRSVQITKTGMYNLYFMHCEQRLVDVVVEGKTIWKNPSGYLPGRMAPLLNFYGFMSLA
                     FLILGIFWFSQYARFWKEVLHLQNCITLVITLGMFEMALWYFDYAEFNESGVRPTGIT
                     VWAVTFGTVKRTVSRLIILTVSMGYGVVRPTLGGLTSKVVMLGGTFFVASEVLELVEH
                     VGAVSDLSGKAMLFLSLPVAVLDAFFVLWIFTSLSSTLNKLQAKRMMAKLDIYRKFTN
                     ALAVAVIVSVGWICYELYFKSTDIYNEQWQNAWIIPAFWHVLSFSLLCVICALWAPSQ
                     NSMRYAYSGDGSEEFDKEDTLTLIKPSPVAVSTKDVTELRSIHSDDDDLEEDKTE"
     misc_feature    585..1445
                     /gene="LOC139841420"
                     /note="Lung seven transmembrane receptor; Region:
                     Lung_7-TM_R; pfam06814"
                     /db_xref="CDD:369089"
ORIGIN      
        1 tccacaacac acaatattca cgcacataaa aaacacagat ctgcgtgttt tactccctat
       61 aattagatta gatctagcag aaagcaatgc cgttactgga ttcgttgaca gcgatattgt
      121 tgctactctt acttagggtt atatacattc acgcgtctgt acatatatac gccggaaata
      181 aattcgagag aaaaggaaat gcatttgtaa tacatggcgg aagtgaggga atctattact
      241 ctcaccctaa tctcaatgat tctgcaacat cttccaatgg cgacgcatat attcgttttg
      301 agaagatcgt attccgaagg cctcaagagg tttcaaattt tagcacaggg ttgatttacg
      361 ccattctatt tgagatggat gaccgagaga ccattggtgg atcggcctat ggaggccaaa
      421 gagctatctg ctgtactgca gatttagcaa agttgggtgc gtgtaaggaa ggggaaatta
      481 ttcaccgcct gtccacaaca aatcctggat ggcctgatgt gtttggtgtt tcgtttgata
      541 tcaatgagga gacttccacc atggaaccaa ggtccgtgca gatcacaaaa actggaatgt
      601 ataatctgta tttcatgcat tgtgaacaaa gactcgttga tgttgttgta gaaggtaaaa
      661 ctatatggaa aaatcctagt gggtaccttc cgggtagaat ggcaccactg ctaaactttt
      721 atgggttcat gtctcttgca tttctaatcc tggggatctt ttggttctcc cagtatgcaa
      781 gattttggaa agaggttctt cacttgcaga attgtataac actagttatt acattgggga
      841 tgttcgagat ggcattatgg tattttgatt atgcagagtt taatgaaagt ggggtgcggc
      901 caacggggat taccgtatgg gcggtaacct ttggcactgt taaacgcacc gtttcacgtt
      961 tgattatcct tacggtttct atgggatatg gtgttgtaag acccacgttg ggtggtctca
     1021 cttcaaaagt tgtcatgctg ggggggacgt tctttgttgc ttctgaagtg cttgaactgg
     1081 ttgaacatgt tggtgctgtc agtgatcttt caggaaaggc aatgctattc ttatcactcc
     1141 ccgtggctgt cttggatgca ttctttgttt tatggatatt cacatctctt tcttcgactc
     1201 tgaataagct ccaggctaaa cgaatgatgg ccaaactaga catatacagg aaattcacaa
     1261 atgcattggc tgtagctgta attgtgtcgg tgggctggat atgctatgag ctctatttca
     1321 agtcaacaga tatatataat gagcaatggc aaaatgcttg gatcatccct gccttctggc
     1381 acgttctgtc attttctctt ctctgtgtca tctgtgctct ttgggcaccg tctcagaatt
     1441 caatgcgata tgcttactct ggtgatggga gtgaagaatt tgacaaggag gataccttaa
     1501 cgctcataaa accatccccc gtggctgttt ctacaaaaga tgtaaccgaa ttaagatcga
     1561 ttcacagtga tgatgatgat ttggaagaag ataaaacaga gtaattttta agagggaatg
     1621 gtttaggtga ggatttcttg catttttttt tctttctttg tacgcttttc aactcaatta
     1681 cttttgtaaa attatataga atttaaactg ttactagctg tatattttac taacactgct
     1741 tcatttgaac cattttgcta aaataacatt catataaata agct
//
LOCUS       XM_071831639             579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841421), mRNA.
ACCESSION   XM_071831639
VERSION     XM_071831639.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..579
                     /gene="LOC139841421"
                     /note="uncharacterized LOC139841421; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841421"
     CDS             1..579
                     /gene="LOC139841421"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687740.1"
                     /db_xref="GeneID:139841421"
                     /translation="MPIALDLEDTTAPTPELWELYTDGESGPEGVGTGLLLTGPNKEE
                     HTYALRFNFKATNNEVEYEAVLVGIRLAKEIGVKKIQTYVDSYSVSNQINGSFEAHNK
                     GMQAYLALARSLVREFNDFQISQIPRSQNKQVDVLSKLAALTFNHLEKKVLVEQVFKK
                     SIKPSQLTDVVEEAEHCWMTDIIEFLKTGSLP"
     misc_feature    52..426
                     /gene="LOC139841421"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(67..78,166..174,181..183,253..255,373..375,415..417)
                     /gene="LOC139841421"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgccaattg cgcttgactt agaagatacc acagcgccaa caccggaact ttgggagttg
       61 tatactgatg gcgagagtgg tccggaagga gtgggcacag gtttgttgct cactggaccc
      121 aataaggagg agcacaccta tgcgctaaga ttcaatttca aggcaacaaa taatgaagta
      181 gaatatgaag ctgtgctagt aggaataagg ctagctaagg aaattggggt caaaaaaatc
      241 caaacgtatg ttgattccta ttcagtttcc aatcagatta acggttcctt cgaagctcac
      301 aataaaggaa tgcaggcgta cctggctttg gcacgttccc tggtccgcga attcaatgat
      361 tttcagataa gccagatacc tagaagccag aacaaacaag tagacgtgtt aagcaaactg
      421 gccgcgctaa catttaatca cctcgaaaag aaggtcctcg ttgagcaagt ttttaagaaa
      481 tctattaagc ctagtcaact aactgatgtt gtagaagaag ctgagcattg ctggatgacc
      541 gatataattg agttcctaaa gacaggctcg ctgccctaa
//
LOCUS       XM_071831640             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841422), mRNA.
ACCESSION   XM_071831640
VERSION     XM_071831640.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139841422"
                     /note="uncharacterized LOC139841422; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841422"
     CDS             1..576
                     /gene="LOC139841422"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687741.1"
                     /db_xref="GeneID:139841422"
                     /translation="MIPITSPWPFCKWTIDIVGPFPAGSESADYLVVAIDFFTKWVEA
                     KPLSKIMSNKVTDFFWDSIVCSTGETPFSLVYGLEAVLPVAIAIPTEKMMSFNQNQNS
                     RDMRTNLELLQERREMTAAREAINKQRIARYYDKRVRLITYTVGDLVWRDNQASRIED
                     TRKLGPNWEAPTGSLELLKLEPTNWRSSMVR"
     misc_feature    25..>228
                     /gene="LOC139841422"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
     misc_feature    271..>432
                     /gene="LOC139841422"
                     /note="rRNA-processing arch domain; Region:
                     rRNA_proc-arch; pfam13234"
                     /db_xref="CDD:463813"
ORIGIN      
        1 atgatcccca taacgtcacc atggcctttc tgcaaatgga ccattgacat agtgggaccg
       61 ttccctgccg gatcagaaag cgctgattac ttggtagtcg caatcgactt cttcaccaaa
      121 tgggtagaag caaaaccact aagcaaaatc atgagtaata aagtgacaga ttttttctgg
      181 gatagtattg tttgcagtac tggagagacg ccgttcagtt tggtgtacgg cttagaagca
      241 gttctacctg tagcgatagc catccccaca gagaaaatga tgtctttcaa tcagaatcag
      301 aactctagag atatgcgaac taaccttgaa ttattacaag aacgcaggga aatgacagcc
      361 gcgcgtgagg ctatcaacaa acagcgaatt gcaaggtact acgataagag agttaggctc
      421 attacataca cagttggtga ccttgtttgg cgcgacaacc aggcaagcag aatcgaagac
      481 accaggaaac taggacccaa ttgggaggcc cctacagggt cattggaatt actaaaactg
      541 gaacctacaa actggcggag ctcaatggta aggtga
//
LOCUS       XM_071831641            3483 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor like protein kinase
            S.2-like (LOC139841423), mRNA.
ACCESSION   XM_071831641
VERSION     XM_071831641.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3483
                     /gene="LOC139841423"
                     /note="receptor like protein kinase S.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139841423"
     CDS             130..3363
                     /gene="LOC139841423"
                     /codon_start=1
                     /product="receptor like protein kinase S.2-like"
                     /protein_id="XP_071687742.1"
                     /db_xref="GeneID:139841423"
                     /translation="MSSLFKELDYLRIPYADIKAATNNFDTKNKIQRFSFIRYQVMYE
                     SSVHKGELYQFGQRINIIVEQIPSIKEELLKWVSVLSRFKHKNIPTFVGFCYDKYDCG
                     YLVSECEFMESLEQILSITSDPDYRSEYCLDIRENLTCYHMLQICLGVARALSHIHDC
                     HAIHGAFNSYRILLDKDFEAKVVGLFENPEDIPRIRYTSCYIDPEFERTKTVTPKSDV
                     YSFGVVLIDVFCQQYAYQPWHYQKFPKIPEIEYTHFDDNICKQMNSKALTILLETLNK
                     CLNNEREERPDMAEVVKQLEEALFLQWKHENPEIIKIGLDDVKLATENFAEKYLIGSG
                     GYGKVYKAKLPIYDPLILEIQRMNQEEIPKNEILKKRNFFTKGKFLRNATLILGGKSK
                     REIPKNETPNKECPKKHHTVAIKHILKDENGLGRQGFFLEIEMLRRCNHPNIVSLIGY
                     CDEDSELILVYEFVPNGSLDDYLEGKKKETYLNWVQRIKICLDIAHGLDYLHTKMSDE
                     KRIIHRDIKSANILLGTNWEAKIADFGLSKFYRANQLASTIVTDRIAGTGVYLDPEYS
                     KTGKLKKQSDIYSFGVVLFEVFSGTLAYEKIYTDENDKGLAAVARRRFSEGTLMEIVD
                     PQVMEETEERCFGMKVGPNQESLETFAKIAIQCLAETQGERPKLTDITKELEIALSLQ
                     ETRKDILEFSLEDMQLATENFSEKNFIKNEGFGMLYRGEVLDDIGCKIPVILKVTKSS
                     EEDNFLRELEILFGHKHENIIGIVGYCKEKGDKIIVYENYENAYNVNTLNSHVNDVSL
                     TWTKRLEICLGIANGLKFLHKGFARQQSVVHRDIKSANIILNGDWSPKLCGFGFSLII
                     RKNQEMEYFVNDVPGSLDYCDPVYCDPVYWKTGFLTKESDIYSFGVVLFEMLCGTLAC
                     VKDFRESKQFQDFLVDEIVLEGIKEQVEAKSLATFGRIAYQCLHEEPEKRPKADEVYM
                     QLKKALDIQVLNDRLAVKKDLYSLKLEEGGDLSDHIVTFKRLVSKLSTINEIIKEEDL
                     ALYMLLSLPKSYKRFVDNMSTGITSLKLRDVLQKLGDKNYTNEISYV"
     misc_feature    328..1020
                     /gene="LOC139841423"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1360..2157
                     /gene="LOC139841423"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2266..3057
                     /gene="LOC139841423"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    <3085..3324
                     /gene="LOC139841423"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     polyA_site      3483
                     /gene="LOC139841423"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gagaaaaaca aacaaacagt gtacttcgat gctcctacaa ctatccctga ttttcattaa
       61 ttcaatttct tcaaaaatca acatatactt tttcacaatt tgtctctaaa tcaaagatct
      121 atcatcatca tgtcatcttt gttcaaagaa cttgattact tacgtatccc gtatgctgat
      181 atcaaagctg ctaccaataa ctttgacacc aaaaacaaaa tccaaaggtt tagttttata
      241 agatatcagg ttatgtatga gagtagtgtc cacaaagggg aactatatca gtttggtcaa
      301 aggatcaata ttattgtaga acaaattccg agtataaaag aagagctctt gaaatgggtc
      361 tcagtgcttt ctcgttttaa gcataaaaat attcccactt ttgttgggtt ttgttacgac
      421 aagtacgact gcggttactt agttagtgag tgtgaattta tggaaagtct cgaacaaata
      481 ctaagcatca catctgatcc agattacagg tcagaatatt gtttagacat ccgtgaaaac
      541 cttacatgtt accacatgtt gcaaatatgt ttgggtgttg cccgagcctt gagtcatatc
      601 catgattgtc atgccataca cggtgctttc aacagctata gaattctttt agataaagat
      661 tttgaggcta aggttgttgg tttatttgag aaccctgaag atattcctcg tatcagatat
      721 acctcatgct acattgaccc agagtttgaa aggaccaaaa ctgtcacacc gaaaagtgat
      781 gtgtattctt tcggtgtggt tttgattgac gtgttttgtc agcagtacgc atatcaaccc
      841 tggcactatc agaaatttcc gaagattcct gaaatcgagt atacacactt tgatgataat
      901 atatgcaaac aaatgaactc aaaagcattg accattttgc tagaaacgct taataaatgc
      961 ttgaataatg aacgtgaaga gcgcccagac atggccgagg ttgtgaaaca acttgaggaa
     1021 gctttatttc ttcaatggaa acatgaaaat ccggaaatca tcaagattgg acttgatgat
     1081 gtgaagttag ccacagagaa ttttgctgaa aaatacctta ttggatctgg tggatatggt
     1141 aaggtgtata aagcaaaact tcccatttat gatcctttaa ttttggaaat ccaaaggatg
     1201 aatcaagagg aaattcctaa gaatgaaatt cttaagaaac gcaacttttt tacaaaaggg
     1261 aaattcttaa gaaacgcaac tttaattttg ggagggaaga gcaaaaggga aattcctaag
     1321 aatgaaactc ctaataagga atgtcctaag aaacaccaca ctgtagcaat aaaacatatc
     1381 ttaaaggatg aaaatgggct aggtagacaa gggttctttc tagaaattga aatgcttcgt
     1441 agatgtaacc atcccaacat agtgtcactt atcggctatt gtgatgaaga ttctgaattg
     1501 atccttgtat atgagtttgt tccaaatggt tcacttgatg attatttgga aggcaaaaag
     1561 aaagaaactt atcttaactg ggttcaacgg attaaaattt gccttgatat tgcacatggg
     1621 ttggattatc tacacacaaa aatgagtgat gaaaaaagga taatacatcg tgatatcaaa
     1681 agtgccaaca tattattggg aacaaattgg gaggccaaga ttgctgactt tgggctctct
     1741 aagttctacc gtgcgaatca attggcaagc actatcgtga cagatagaat tgcaggcact
     1801 ggtgtgtact tggatcctga atattcgaag acgggtaaat taaaaaagca atcagacata
     1861 tactcattcg gagttgtttt attcgaagta ttctctggaa cattggccta tgaaaaaatt
     1921 tacaccgatg aaaatgacaa gggacttgca gcggtagcac ggaggcgctt ctccgaggga
     1981 acactaatgg aaatagtaga cccacaagta atggaagaaa ctgaggaacg ttgttttggt
     2041 atgaaggtgg gacctaatca agagtctctg gaaacatttg caaaaattgc aattcaatgt
     2101 ttagcagaaa ctcaagggga gcgaccaaaa ctgacagaca tcaccaagga acttgaaatt
     2161 gcattaagcc ttcaagaaac gcgcaaggac attcttgaat tttcactaga ggacatgcaa
     2221 ttggccaccg aaaactttag tgaaaaaaat ttcattaaaa atgaagggtt tgggatgtta
     2281 tatcgaggag aagttttaga tgacattgga tgtaaaattc cagtcatttt aaaggtcacc
     2341 aaatcttcag aagaagataa ttttttaaga gagcttgaaa tcctctttgg gcataaacac
     2401 gaaaatatta ttggcattgt tggttattgc aaggaaaagg gtgataaaat tatcgtttat
     2461 gaaaattatg aaaatgcata taacgtaaat actctcaata gccatgtgaa tgatgttagt
     2521 cttacatgga caaaaagact tgagatatgc ttaggcattg caaacgggtt aaaatttctt
     2581 cataaaggtt ttgcaagaca acaatcggtt gtacatagag atattaaaag cgctaatatc
     2641 atactaaatg gagattggag tccaaaatta tgtggttttg ggttttcttt gataattcgt
     2701 aaaaatcaag agatggagta tttcgttaat gatgttccag ggtcactcga ctattgtgat
     2761 cccgtgtatt gtgatcccgt ctactggaaa actgggtttt taactaaaga atctgatatt
     2821 tattccttcg gtgtggtttt atttgagatg ttgtgtggaa cacttgcatg tgtaaaggat
     2881 tttagagaat ctaagcaatt tcaagacttc ttagttgatg agattgtttt agagggtatt
     2941 aaggaacaag ttgaagccaa atcgctagct acatttggaa ggattgccta tcaatgcttg
     3001 catgaagagc cagaaaaacg accaaaagcg gatgaagtat atatgcaact caagaaagca
     3061 ttagatatcc aagtgttgaa cgatagattg gctgtcaaaa aagatttgta ttcgttgaaa
     3121 ctcgaagaag gaggtgatct gagtgaccat attgtcacct ttaagcgatt agtttcgaag
     3181 ttgtccacca taaatgagat tataaaagaa gaggacttgg cactatatat gttgttatca
     3241 ttaccaaaat cgtacaaacg attcgtggac aatatgtcaa ctggaatcac cagcttgaaa
     3301 cttcgagacg tacttcagaa gttaggcgac aagaactata caaacgagat ctcttatgtg
     3361 tgaagcatcc attagctaca taggttgtca gaattgtttc aactttcaat catggtacga
     3421 acatataagt ccctagagac agcttgatta cgttaagtgg ttatttaagt taaatttgct
     3481 gca
//
LOCUS       XM_071831642            1155 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841424), mRNA.
ACCESSION   XM_071831642
VERSION     XM_071831642.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139841424"
                     /note="uncharacterized LOC139841424; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841424"
     CDS             1..1155
                     /gene="LOC139841424"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687743.1"
                     /db_xref="GeneID:139841424"
                     /translation="MGRKSFNSNLSVSFRLSSFFMKILSLNVRGFAAKGKFGWVRSIC
                     LKERPCVAVFQETKCKEVSDIWVQSLWGDLNCGYVQKGAVEIPISERKFTRISDDGVK
                     FSKLDRFLVSDGFLHLWDDLLIISLDRNLSDHCPLILRDRVLDYGPRPFKVFNEWFNC
                     VEVGNVIKEAWEQPILGSRKDCAFRDKLKNVKVALKTWSHKNFGSLDTEINDLKKEAM
                     EWELKAKSNILSDSDRATWLDCRRRWVEKEKVKTNMMKQKAKVKWILDGDENSKFFHA
                     TLRRKYNNCNFRGIMVDGAWHKDSVFVKDTIYNHFQKQFSKNLECRPRILGGFISCSS
                     SVQEQIIGSTVARGPIRLGVPGVSGNLDQYACASGIRCKHITVEEANGLE"
ORIGIN      
        1 atggggagaa aatcgtttaa cagtaattta tcagtttctt ttcgtttgtc atctttcttt
       61 atgaagatac tttcattaaa tgttcggggg tttgcagcaa agggaaaatt tgggtgggtt
      121 cgtagtattt gtttgaaaga aagaccttgt gttgcagttt ttcaagaaac aaaatgtaag
      181 gaggtttccg atatttgggt gcaatcttta tggggtgact taaattgtgg atatgttcaa
      241 aaaggggcgg ttgagattcc aattagtgag agaaaattta ctagaattag tgatgatggt
      301 gtaaagttta gtaagctcga tagattcttg gtctcggatg ggttccttca tctttgggat
      361 gatcttttga ttatctcctt agatcggaac ctctcggatc attgtccttt gattcttagg
      421 gatagggtgt tagattatgg accgaggcca tttaaagtgt tcaatgaatg gtttaattgt
      481 gttgaagtgg gtaatgtaat taaggaggct tgggaacaac ctattttggg ttcaagaaaa
      541 gattgtgcat ttagggataa gttgaagaat gtcaaggtgg cccttaaaac ttggagtcat
      601 aaaaattttg gttcccttga tacggaaata aatgatctca agaaagaagc catggaatgg
      661 gaattaaagg caaaatccaa tattcttagt gactctgacc gggcaacgtg gttggattgt
      721 cgaagacgtt gggtggaaaa ggaaaaagtg aaaactaaca tgatgaaaca aaaagcgaag
      781 gtaaaatgga tcctcgatgg ggatgaaaac tcaaagttct ttcatgctac gttacgaaga
      841 aaatacaata attgtaattt tcggggtata atggttgatg gagcttggca caaagattcg
      901 gtatttgtta aagatacgat ttataatcat tttcagaagc aattctcaaa aaatttagaa
      961 tgtagaccga gaatattggg gggctttatt agttgcagtt caagtgtaca agaacaaatt
     1021 attgggtcta ctgttgctcg tgggcctatt aggcttgggg tcccaggcgt aagtgggaat
     1081 cttgatcagt atgcatgtgc ttcaggtatt aggtgtaagc atattacagt agaggaagct
     1141 aacggattgg aatag
//
LOCUS       XM_071831643             531 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841425), mRNA.
ACCESSION   XM_071831643
VERSION     XM_071831643.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..531
                     /gene="LOC139841425"
                     /note="uncharacterized LOC139841425; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841425"
     CDS             1..531
                     /gene="LOC139841425"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687744.1"
                     /db_xref="GeneID:139841425"
                     /translation="MQSNRYKGAVRGIKTLNEEAWDYLEEDDIHKWTLYRENDRRWAN
                     LTTNIAESLNNVLHHAHMMPVKACIDYTFHYTREHFNMQETTSHEWHAPLSKTMWVQF
                     QDRDKLGSSYTVTCYDFETGMYKVQSIYQRNDDGGTEYTIRYFANKCTCGRWQHQRTP
                     CSHGIAVCRKRNQDPT"
     misc_feature    442..522
                     /gene="LOC139841425"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgcaaagta atagatacaa aggtgcagtg cgtggaatta aaacattgaa tgaggaggct
       61 tgggattatt tagaggaaga tgatattcat aagtggactt tgtatagaga gaacgatcgt
      121 cgttgggcta acttaaccac aaacatagcc gagtcgttga acaatgtttt gcatcatgcc
      181 catatgatgc cagtcaaagc gtgtattgat tatacatttc actacacaag agagcacttc
      241 aacatgcaag aaacaacctc tcatgaatgg cacgcaccac tatccaagac tatgtgggtt
      301 caatttcaag atcgtgataa acttggttct agttacacag taacatgcta tgactttgaa
      361 acagggatgt acaaggtcca atctatatat caaagaaacg atgatggtgg gacagagtac
      421 actattagat attttgccaa taagtgcact tgtggaagat ggcaacatca aaggacgcct
      481 tgctctcatg gcattgcagt atgtcgcaaa cgaaatcaag atccaacatg a
//
LOCUS       XM_071831644            1752 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841426), mRNA.
ACCESSION   XM_071831644
VERSION     XM_071831644.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1752
                     /gene="LOC139841426"
                     /note="uncharacterized LOC139841426; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841426"
     CDS             1..1752
                     /gene="LOC139841426"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687745.1"
                     /db_xref="GeneID:139841426"
                     /translation="MDELRNGHNNNHTPNTSNPKANNPQHTTSAPNNNNHPNTNNTTQ
                     GGCSYKTFMSCGPHSFAGTEGPVGLTRWFKKLESVFRISRCRDTDRTQFASSYDQAYE
                     MPWEDLKQRMVEEYCPYTEIMKMERELRNLKLVGTDSAGYNKRFFELALMCPSMVTPE
                     RRKIILYVKGLTENIRSGVTSSKPKTIQEAIEMTSELLDQIEQGGKAPMSNEARSSDH
                     KRKWNNNSDKNYSQKFNKKPNTSKGNTTAPNTNFGYKGKFKLCNKCNSHHPGDWRIFC
                     DKCNKSGHTAKECKAGSRNCFKCGKPGHFMKDCPNAKKNVEPAKGRAFNINSNEAHDD
                     PKLVMSTFLLDNHHAYVLFDSGADRSFVSKDFCHNIKNPVSSLENLYSIELGNGNLMK
                     ANRIYRGCTLNLVEKSFSIDVIPIQLGSFDLVVGMDWLSDNRAEIVCDQKAIHIPIVD
                     SEPLMVYRERSCMPLHFINCLKVQKCIRKGCLAMLVHVSKTEPKVKKLEDVPIVRDFP
                     DIFLEELPGLPLHRDVEFQIDLMPGAAPVARAPYRLAPSELQELSSQLQELLDKGFIR
                     PKREGARTTSPFDTRDS"
     misc_feature    <304..651
                     /gene="LOC139841426"
                     /note="Ty3 transposon capsid-like protein; Region:
                     Ty3_capsid; pfam19259"
                     /db_xref="CDD:437091"
     misc_feature    826..>960
                     /gene="LOC139841426"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    955..1332
                     /gene="LOC139841426"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1060..1062,1066..1068,1072..1074,1147..1155,
                     1270..1272)
                     /gene="LOC139841426"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1060..1068
                     /gene="LOC139841426"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1060..1062
                     /gene="LOC139841426"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1147..1158,1168..1179)
                     /gene="LOC139841426"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggatgagc taagaaatgg gcacaacaac aaccacactc ccaacaccag taacccgaaa
       61 gctaataatc ctcagcacac cactagcgcc ccgaacaaca acaaccatcc aaataccaac
      121 aacactactc aaggagggtg ttcttacaag acttttatga gctgcggacc acattcattt
      181 gcgggtactg aaggaccagt tggcctaact cgttggttca agaagctcga atccgtcttc
      241 cgtatcagta gatgtagaga tactgataga acacagtttg cttccagtta tgatcaagct
      301 tatgaaatgc cctgggaaga cttgaaacaa agaatggttg aagagtactg tccttatact
      361 gaaatcatga aaatggagcg agaactccgg aacttgaaat tggttggtac tgattcagct
      421 ggctataata agagattctt tgaacttgct cttatgtgtc caagcatggt tactccagaa
      481 cgcaggaaga tcattctgta tgtgaagggt ttaactgaga acatccgaag tggtgtgact
      541 tcttctaaac caaagactat tcaggaagct atcgaaatga ctagtgagtt gttggatcag
      601 atcgagcaag gaggaaaagc tcccatgtcc aatgaggcaa gatcgtctga tcataaaagg
      661 aagtggaaca acaattctga caagaattac agccagaagt tcaacaagaa accgaatact
      721 agcaagggta acactactgc tcctaatacc aattttgggt ataaaggaaa gttcaagcta
      781 tgtaacaaat gcaatagcca tcacccggga gattggagaa tattctgtga caagtgcaac
      841 aagagtggac acactgctaa agaatgtaaa gctggatcac gaaattgttt taaatgtggt
      901 aagccgggcc attttatgaa agattgccca aatgctaaaa agaatgtcga gcctgctaaa
      961 ggtagggcat tcaacatcaa ttccaatgaa gctcatgacg atccaaagct agttatgagt
     1021 acgttcttac tcgacaatca tcatgcttat gtactttttg attctggagc tgataggagt
     1081 tttgtgtcta aagacttctg ccataatatt aagaatcctg tgtcatcatt agaaaactta
     1141 tattctatag aattagggaa tggtaatcta atgaaagcta accgaattta ccgcgggtgt
     1201 actttaaact tagttgagaa atcttttagt attgatgtga taccgataca actgggaagt
     1261 tttgacctag tggtcggaat ggactggtta tccgataata gagccgagat cgtctgcgac
     1321 cagaaagcta ttcacattcc tatcgttgat agtgaacctt tgatggtgta cagagaacga
     1381 agctgcatgc cattacattt cattaattgt ttgaaagtgc agaaatgcat taggaagggt
     1441 tgtcttgcaa tgttggttca tgtgagcaaa actgaaccta aagtcaagaa actcgaagat
     1501 gtaccgattg ttcgagattt tcccgatatt tttctggaag aattaccagg tcttccactg
     1561 catagagatg tggaatttca gattgaccta atgcctggag cggcacctgt agcccgagca
     1621 ccgtatagac tcgcaccttc tgaattacaa gagttatcta gccagctaca agaacttcta
     1681 gacaagggat tcatcagacc gaaacgagaa ggagcacgaa caacatctcc atttgatact
     1741 cgagattctt ag
//
LOCUS       XM_071831645             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139841428), mRNA.
ACCESSION   XM_071831645
VERSION     XM_071831645.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139841428"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139841428"
     CDS             1..804
                     /gene="LOC139841428"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071687746.1"
                     /db_xref="GeneID:139841428"
                     /translation="MSSLFKEVDYLRIPYADIKAATNNFDIVNMIGIYHSKNVNYYVY
                     EGELFRSGKRINIIVERILGIQEVQLLEGVSVISRFKHNNIPTFVGFCYDKYLGGYLV
                     SECEFMESLEQILNITPNPSIRKSEYRIRENLTCYHMLQICLGVARALSHIHDCHAIH
                     GSFNSYKIFLDKDFEAKVVGLFENPEYFPLTRYTCYVDPESECLNIFLTPKSDVYSFG
                     VVLIDVFCQQHAADQSWHYLEFPEIPEIEYTHFDDNIRKQMNSKARPFC"
     misc_feature    199..>696
                     /gene="LOC139841428"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgtcatctt tgttcaaaga agttgattac ttacgaatcc cgtatgctga tatcaaagct
       61 gctaccaata actttgacat cgtaaacatg ataggaattt accatagtaa aaatgtgaat
      121 tactatgtgt acgaaggaga actatttcgg tctggaaaaa gaatcaatat tattgtagaa
      181 aggattctag gtatccaaga agtacaactc ttggaagggg tatcagttat ttctcgtttt
      241 aagcataata atattcccac ttttgttggg ttttgttacg acaagtactt gggcggttac
      301 ttagttagtg aatgtgaatt tatggaaagt ctcgaacaaa tactaaacat cacacctaat
      361 ccaagtatca ggaaatcaga atatcgcatc cgtgaaaacc ttacatgtta ccacatgttg
      421 caaatatgtt tgggtgttgc ccgagccttg agtcatatcc atgattgtca tgccatacat
      481 ggcagtttca acagctataa aatatttttg gataaagatt ttgaggctaa ggttgttggt
      541 ttatttgaga accctgaata ttttcctctt actagatata cctgctacgt tgacccagag
      601 tctgaatgtc tgaatatatt cctcacaccg aaaagtgatg tgtattcttt cggtgtggtt
      661 ttgattgacg tgttttgtca gcagcacgcc gcagatcagt cctggcacta cctggaattt
      721 ccagagattc ctgaaatcga gtatacacac tttgatgata atatacgcaa acaaatgaac
      781 tcaaaagcaa gaccattttg ttag
//
LOCUS       XM_071831646             348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841429), partial mRNA.
ACCESSION   XM_071831646
VERSION     XM_071831646.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..348
                     /gene="LOC139841429"
                     /note="uncharacterized LOC139841429; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841429"
     CDS             <1..348
                     /gene="LOC139841429"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687747.1"
                     /db_xref="GeneID:139841429"
                     /translation="HGATNVAKVQNSGSGFKRWGRKGPFIRYGLPMISLTVFGAFGLG
                     HLLQGSKDIAKVKDDQEWEILETKKALSRTGPIEAYKPKNLSLEEELKALQQSVDINV
                     YEYKKIPKPNEAN"
     misc_feature    76..339
                     /gene="LOC139841429"
                     /note="Cytochrome c oxidase assembly protein COX16;
                     Region: COX16; pfam14138"
                     /db_xref="CDD:464091"
ORIGIN      
        1 catggagcta caaatgttgc taaagttcaa aattcaggtt cagggtttaa aagatgggga
       61 agaaaagggc catttattcg atatgggctt cctatgatct cactcactgt ttttggagca
      121 tttggtcttg gtcatctctt gcagggcagc aaggatatag ctaaggtgaa agacgaccaa
      181 gagtgggaga ttcttgaaac aaaaaaagct ctttcaagaa cgggaccgat tgaagcttac
      241 aaacctaaaa acttatctct tgaggaggag ctaaaggctt tgcagcagag tgttgacata
      301 aacgtctatg aatataagaa gatccccaaa ccaaatgaag ctaactga
//
LOCUS       XM_071831649            1002 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139841430), mRNA.
ACCESSION   XM_071831649
VERSION     XM_071831649.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1002
                     /gene="LOC139841430"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139841430"
     CDS             1..1002
                     /gene="LOC139841430"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071687750.1"
                     /db_xref="GeneID:139841430"
                     /translation="MSSLFKEVDYLRIPYADIKAATNNFDTRNKIVFQCVKVKRDECI
                     KVESGYRLMSTKGNMSASILSYNVYKGELYRFGKRINIIVEYFGIIEEEELLKWVSLL
                     SRFKHKNIPTFVGFCYDKYNMCYLVSECEFMESLEQILSITSNPSFRSEYCLDIRENL
                     TCYHMLQICLGVARALSHIHDCHAIHGGFNSYRILLDKDFEAKVVGFIKDPEYIPLTR
                     HTCYIDPEFERTKTVTPKSDVYSFGVVLIDVFCQEYAADQPWHYQEFPEIPEIEYTHF
                     DDNICKQMNSKAMTILLETLNKCLNNEREERPDMAEVVKQLEEALFLQWKHENPVSP"
     misc_feature    196..957
                     /gene="LOC139841430"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgtcatctt tgttcaaaga agttgattac ttacgaatcc cgtatgctga tatcaaagct
       61 gctaccaata actttgacac cagaaacaag atagttttcc agtgtgttaa ggttaaaaga
      121 gatgaatgca taaaggttga gagtggatat cggttaatgt ctacaaaggg gaacatgtcg
      181 gcttcaattt taagttataa tgtctacaaa ggggaactat atcggtttgg taaaaggatc
      241 aatattattg tagaatattt tgggattata gaagaagaag agctcttgaa atgggtctca
      301 ctgctttctc gttttaagca taaaaatatt cccacttttg ttgggttttg ttacgacaag
      361 tacaacatgt gctacttagt tagtgagtgt gaatttatgg aaagtctcga acaaatatta
      421 agcatcacat ctaatccaag tttcaggtca gaatattgtt tagacatccg tgaaaacctt
      481 acatgttacc acatgttgca aatatgtttg ggtgttgccc gtgccttgag tcatatccat
      541 gattgtcatg ccatacatgg tggtttcaac agctatagaa tacttttaga taaagatttt
      601 gaggctaagg ttgttggttt tattaaggac cctgaatata ttcctcttac tagacatacc
      661 tgctacattg acccagagtt tgaaaggacc aaaactgtca caccgaaaag tgatgtgtat
      721 tctttcggtg tggttttgat tgacgtgttt tgtcaggagt acgccgcaga tcagccctgg
      781 cactaccagg aatttccgga gattcctgaa atcgaatata cacactttga tgataatata
      841 tgcaaacaaa tgaactcaaa agcaatgacc attttgttag aaacgcttaa taaatgcttg
      901 aataatgaac gtgaagagcg cccggacatg gctgaggttg tgaaacaact tgaggaagct
      961 ttatttcttc aatggaaaca tgaaaatccg gtaagcccgt aa
//
LOCUS       XM_071831650             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841431), mRNA.
ACCESSION   XM_071831650
VERSION     XM_071831650.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139841431"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139841431"
     CDS             1..750
                     /gene="LOC139841431"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687751.1"
                     /db_xref="GeneID:139841431"
                     /translation="MQITKSNLRFKAISRAWFGKFNAVVRNFGLRRSAYDHSVFFASS
                     NFGCILLVVYVDDIVITGSDKEGIHGLKTFLSTQFQKKDLGPLKYFLGIEVSRNKRGI
                     FLSQRKYCLDVLSDSGMINAKTCETPMIPSIKLKTDEGELLMNLEKYRRIVGKLSYLT
                     LTRPDIAFPVSVVSQFLSSPRTSHWDAVTHILKYLKCTPGRGLLYQNHGHHTIEGFSD
                     ADYNGDPATKRSTTGYCVFVGGNLVSWKSKK"
     misc_feature    <4..390
                     /gene="LOC139841431"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    640..>747
                     /gene="LOC139841431"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcaaatta cgaaaagtaa tttacggttt aaagcaatct ctcgtgcctg gttcggaaaa
       61 ttcaatgcgg tagttagaaa ctttggccta agaagaagtg catatgatca ctctgtattc
      121 ttcgcttcat caaactttgg gtgcatcttg cttgttgttt atgtggatga tattgtaatt
      181 actgggagtg ataaagaagg aattcacggg ttaaaaacat tcttaagtac tcaatttcaa
      241 aagaaggacc ttggtccttt gaaatatttt ctcggtattg aagtctctcg aaataaaaga
      301 ggtattttct tatctcagag aaagtattgt cttgatgtgc tcagtgattc tgggatgatt
      361 aacgcaaaaa cttgtgaaac accaatgata cctagtataa agttaaaaac tgacgaagga
      421 gaacttctta tgaacctaga aaaatataga aggattgtcg gcaagctaag ttatcttaca
      481 ctcacccgtc ctgatattgc tttcccggtg agtgttgtta gtcagttctt gtcatctccg
      541 agaacctcac attgggatgc tgtcactcac atcttaaagt acttaaaatg tacacctggt
      601 cgtggtcttt tataccagaa tcatggtcat cacactatcg agggattttc tgatgctgat
      661 tataatggtg atcctgcaac taaacggtct acaactggtt attgtgtctt cgttggagga
      721 aatcttgtat cttggaaaag taagaaataa
//
LOCUS       XM_071831651            3159 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor like protein kinase
            S.2-like (LOC139841433), mRNA.
ACCESSION   XM_071831651
VERSION     XM_071831651.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 58% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3159
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3159
                     /gene="LOC139841433"
                     /note="receptor like protein kinase S.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139841433"
     CDS             1..3159
                     /gene="LOC139841433"
                     /codon_start=1
                     /product="receptor like protein kinase S.2-like"
                     /protein_id="XP_071687752.1"
                     /db_xref="GeneID:139841433"
                     /translation="MSSLFKELDYIRIPYADIKAATNHFDINNMIQIPYENYYVYEGE
                     LFRSGKRINIIVERIIDIREVQLLEGVSVMSRFKHKNIPTFVGFCCNYDWGYLVSECE
                     FMASLNQILNTPHPNIRKSEYHIRENLTCYHMLQICLGVARALSHIHDCHAIHGSFNR
                     DKIFLDKDFEAKVVGFIDVPEINHLIKYTTHYVDPEYERTKTVTPKSDVYSFGVVLID
                     VFCRQYARRDQPWEYTHFDDNICKQMNSKALTILLETLNKCLNNEREERPDMAEVVKQ
                     LEEALFLQWKHENPEIIKIGLADVKLATENFAEKYLIGSGGYGKVYKTQLTILEIQGM
                     NEKEIPKNEILKKRNLFTKLILGGKNKKEIPKNETPNKECPKKHLTVAIKHILKDENG
                     QGRQGFFLEIEMLRRCKHPNIVSLIGYCDEDSELILVYEFVPNGSLDDYLGSIKKETH
                     LNWVSRIKICLDIAHGLDYLHTKVSDEERIIHRDIKSANILLGTNWEAKIADFGLSKF
                     YRVNQLTSTILTDRIAGTDVYLDPEYGKTGKLKKQSDIYSFGVVLFEIFSGTLAYEKI
                     YTDENNKGLAAVARRRFSEGTLMEIVDPQVMEETEEHCFGLKVGPNHESLETFAKIAI
                     QCLAETQGERPKLTDITKELEIALNLQVSRCFKSNTTSIFSVCLTSKQLETRKDILEF
                     SLEDMQLATENFSEKNFIKKEGFGMLFRGEVPNDIGCKIPVILKVTKSSEENNFLREL
                     EILFGHKHENIIGILGYCNEKDDKIIVYENAYNVNTLNSHVNDVSFTWTKRLEICLGI
                     ANGLKFLHKGFARKQSVVHRDIKSANIILNGDWTPKICGFGFSLIIRKNQETEYFVND
                     VPGSPDYCDPVYEKTGFLTKESDIYSFGVVLFEMMCGTLACVKDFRKSAQFQDFLVDD
                     IVLEGIQERIEAKSLATFGSIVHQCLHEEPEKRPKADEVYVQIKKALDIQVLNDRLTV
                     KRDLYSLNLEEGGNLSDHIVTFNRLVSKLSNINEIMKEEDLALYMLLSLPKSYKRFVD
                     DMLTGITSLKLKDVLRKLDDNK"
     misc_feature    190..837
                     /gene="LOC139841433"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1138..1935
                     /gene="LOC139841433"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2098..2862
                     /gene="LOC139841433"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2098..2109,2116..2118,2122..2124,2170..2172,
                     2176..2178,2254..2256,2302..2313,2455..2457,2467..2472,
                     2476..2478,2506..2511)
                     /gene="LOC139841433"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    <2905..3144
                     /gene="LOC139841433"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcatctt tgttcaaaga gcttgattac atacgaatcc cgtatgctga tatcaaagct
       61 gctaccaatc actttgacat caacaacatg atacaaatcc cgtatgagaa ttattatgtg
      121 tacgaaggag aactatttcg gtctggaaaa agaatcaata ttattgtaga aaggattata
      181 gatatccgag aagtacaact cttagaaggg gtatcagtta tgtctcgttt taagcataaa
      241 aatattccca cttttgttgg gttttgttgc aactacgact ggggttactt agttagtgag
      301 tgtgaattta tggcaagtct caaccaaata ctaaacacac ctcatccaaa tatcaggaaa
      361 tcagaatatc acatccgtga aaaccttaca tgttaccaca tgttgcaaat atgtttgggt
      421 gttgcccgag ccttgagtca tatccatgat tgtcatgcca tacatggcag tttcaacaga
      481 gataaaatat ttttggataa agattttgag gctaaggttg ttggttttat tgatgtccct
      541 gaaattaatc atcttattaa atataccacc cactatgttg acccagagta tgaaaggacc
      601 aaaactgtca caccgaaaag tgatgtgtat tctttcggtg tggttttgat tgacgtgttt
      661 tgtcggcagt acgcacgtcg agatcagccc tgggagtata cacactttga tgataatata
      721 tgcaaacaaa tgaactcaaa agcattgacc attttgttag aaacgcttaa taaatgcttg
      781 aataatgaac gtgaagagcg cccagacatg gccgaggttg tgaaacaact tgaggaagct
      841 ttatttcttc aatggaaaca tgaaaatccg gaaatcatca agattggact tgctgatgtg
      901 aagttagcca cagagaattt tgctgaaaaa taccttattg gatctggtgg atatggtaag
      961 gtgtataaaa cacaactcac cattttggaa atccaaggga tgaatgaaaa ggaaattcct
     1021 aagaatgaaa ttcttaagaa acgcaacctt tttacaaagt taattttggg agggaagaac
     1081 aaaaaggaaa ttcctaagaa tgaaactcct aataaggaat gtcctaagaa acaccttact
     1141 gtagcaataa aacatatctt aaaagatgaa aatgggcaag gtagacaagg attctttcta
     1201 gaaattgaaa tgcttcgtag atgtaagcat cccaacatag tgtcacttat cggttattgt
     1261 gatgaagatt ctgaattgat ccttgtatat gagtttgttc caaatggttc ccttgatgat
     1321 tatttaggaa gcataaaaaa agaaactcat cttaactggg ttagtcggat taaaatttgc
     1381 cttgatattg cacatgggtt ggattatcta cacacaaagg tgagtgatga agaaaggata
     1441 atacatcgtg atatcaaaag tgccaacata ttattgggaa caaattggga ggccaagatt
     1501 gctgactttg ggctctccaa gttctaccgt gtgaatcaat tgacgagcac tatcttgaca
     1561 gatagaattg caggcactga tgtgtacttg gatcctgaat atggaaagac gggtaaatta
     1621 aaaaagcaat cagacatata ctcattcgga gttgttttgt tcgaaatatt ctctggaaca
     1681 ttggcctatg aaaaaattta caccgatgaa aataacaagg gacttgcagc agtagcacgg
     1741 aggcgcttct ctgagggaac actaatggaa atagtagacc cacaagtaat ggaagaaact
     1801 gaggaacact gttttggtct gaaggtggga cctaatcatg agtctctgga aacatttgca
     1861 aaaattgcaa ttcaatgttt agcagaaact caaggggagc gaccaaaact gacagacatc
     1921 actaaggaac ttgaaattgc attaaacctt caagtaagtc gatgctttaa atccaatacg
     1981 acaagtattt tctctgtatg cttgacctct aaacaattag aaactcgcaa ggacattctt
     2041 gaattttcac tcgaggacat gcaattggcc accgaaaact ttagtgaaaa aaatttcatt
     2101 aaaaaggaag ggtttgggat gttatttcga ggagaagttc caaatgacat tggatgtaaa
     2161 attccagtca ttttaaaggt caccaaatct tcagaagaaa ataatttttt aagagagctt
     2221 gaaatcctct tcgggcataa acacgaaaat attatcggca ttcttggcta ttgcaatgaa
     2281 aaagatgata aaattatcgt ttatgaaaat gcatataacg taaatactct caatagccat
     2341 gtgaatgatg ttagttttac atggacaaaa agacttgaga tatgcttagg cattgcaaac
     2401 gggttaaaat ttcttcataa aggttttgca agaaaacaat cggttgtaca tagagacatt
     2461 aaaagcgcta atatcatact aaatggggat tggactccaa aaatatgtgg tttcgggttt
     2521 tccttgataa ttcgtaaaaa tcaagagacg gaatatttcg ttaatgatgt tcctgggtca
     2581 cccgattatt gtgatcctgt ctacgagaaa actggttttt taactaaaga atctgatatt
     2641 tattcctttg gtgtggtttt atttgagatg atgtgtggaa cacttgcatg tgtaaaggat
     2701 tttagaaaat ctgcgcaatt tcaagacttc ttagttgatg atattgtttt agagggtatt
     2761 caggaacgaa ttgaagccaa atcgctagct acatttggaa gtattgtcca tcaatgcttg
     2821 catgaagagc cagaaaaacg accaaaagcg gatgaagtat atgtgcaaat caagaaagca
     2881 ttagatatcc aagtgttgaa cgatagattg actgtcaaaa gagatctgta ttcgctgaat
     2941 ctcgaagaag gaggtaatct gagtgaccat attgtcacct ttaatcgctt agtttcgaag
     3001 ttgtccaaca taaatgagat tatgaaagaa gaggacttgg cactatatat gttgttatca
     3061 ttacccaaat cgtacaaacg atttgtggat gatatgttaa caggtatcac cagcttgaaa
     3121 cttaaagacg tgcttcggaa gttagatgac aacaagtaa
//
LOCUS       XM_071831652             711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841434), mRNA.
ACCESSION   XM_071831652
VERSION     XM_071831652.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..711
                     /gene="LOC139841434"
                     /note="uncharacterized LOC139841434; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841434"
     CDS             1..711
                     /gene="LOC139841434"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687753.1"
                     /db_xref="GeneID:139841434"
                     /translation="MEADQDVLVNDRVQWHENSYVATWSWRRELSARAKVEFEQLINS
                     LNLYVKRDRASDTWVWNLASNGIFTTKKLTRLIDDKLLLDGRSRSQTLKNCLVPTKVE
                     IFIWRMLKRRIPVHTELDKRGIDLDSVRCPLCDDGVESIDYSMIFCRHSMEVWERVYK
                     WWGLGAVANLSINEAFRDLSIPLSVNLVGESPRCFAGDWLCRFSCSLHHHSISSGLLM
                     KQQEFNDFGERKNLMTFQ"
     misc_feature    <280..462
                     /gene="LOC139841434"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaagctg atcaggatgt tttggttaat gatcgagtac agtggcatga gaattcctac
       61 gtggcaacat ggagctggcg tcgtgaacta tctgctcgag caaaggttga attcgaacaa
      121 ttaattaatt cactaaactt gtatgttaaa cgagataggg cctcggatac ttgggtttgg
      181 aacttagcct cgaacggtat cttcactaca aaaaagctca cgagattgat tgatgataaa
      241 cttctactag atggcaggtc gagatctcaa actctcaaaa actgtcttgt tcctacaaaa
      301 gttgaaatat tcatttggag gatgttgaaa aggcggattc cggttcatac cgaacttgat
      361 aaaagaggta tcgatctaga ctccgtaaga tgtcctttat gtgatgacgg ggtggaatca
      421 attgactact ctatgatttt ttgtcgacac tcgatggaag tttgggaaag agtatacaaa
      481 tggtgggggt tgggagcggt tgcgaactta agcatcaatg aggcctttcg agatctatca
      541 ataccgctat ctgttaacct agtcggagaa tccccacgtt gtttcgccgg agattggctc
      601 tgccgcttca gctgctcgct tcaccaccac tcgatctcat cagggttatt gatgaagcag
      661 caagaattta atgattttgg agaaaggaag aatttaatga catttcaata a
//
LOCUS       XM_071831653            1131 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841435), mRNA.
ACCESSION   XM_071831653
VERSION     XM_071831653.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1131
                     /gene="LOC139841435"
                     /note="uncharacterized LOC139841435; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841435"
     CDS             1..1131
                     /gene="LOC139841435"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687754.1"
                     /db_xref="GeneID:139841435"
                     /translation="MATKFLTKYFPPFKQTNLKNDIINFHQNYDESLYTAWERFKTLL
                     KKCPNHQMEKSAQICTFYNGLTVNHRIKIDAAVQGNPMNQTVEAWELPKNMTMHHHDW
                     NSAPKENLPGNQITKATNLSTEDQLNQFIQGQHQLNQRTAPRQDQTKALMKNQFALLK
                     SLDLQLGQLSQQLETQPQGKLPSNTIQNPYIEEAKQMDSILPKEVPAPRRRSARLKNK
                     SVNTQQLPKPNPVRVSYPGRLKENPEKLGTFKLYRKFLDSMSIVPNQNRYIRRLLSTK
                     DRMPDSNKILLSEECTKLLRDSLPTKLGDTGRFTFPFSIYQSGTIHALADLGANINLM
                     PYSLFKRLELGDLLPTKVTIQLADHTIHYPKDIVENILVKVE"
     misc_feature    <7..195
                     /gene="LOC139841435"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    958..>1074
                     /gene="LOC139841435"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(976..978,982..984,988..990,1060..1068)
                     /gene="LOC139841435"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    976..984
                     /gene="LOC139841435"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    976..978
                     /gene="LOC139841435"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atggctacta aattcctaac caaatatttc cctccattca agcaaaccaa tcttaaaaat
       61 gacatcatta attttcatca aaattatgat gaatctctgt acaccgcatg ggagcgattc
      121 aaaaccttac tgaagaaatg cccgaaccac caaatggaga agtcagccca aatatgcacc
      181 ttctacaatg gtcttacggt aaatcatagg ataaagattg atgcagcagt tcaagggaat
      241 ccgatgaatc aaacagtaga agcatgggaa ttgcccaaaa atatgacaat gcatcatcat
      301 gactggaata gtgcacccaa agaaaacctt cctggtaacc agattacaaa agcaactaac
      361 ttaagtactg aagatcagtt gaaccagttc attcaaggac agcaccagct gaatcagaga
      421 actgcaccta gacaagatca gacaaaagca ctcatgaaaa atcaattcgc gctactaaaa
      481 agtctagatt tgcagctcgg acagttatca caacaacttg agacccaacc acaaggaaaa
      541 ttgcctagta ataccatcca aaacccctac atagaggaag ctaaacaaat ggattctatc
      601 ctaccgaagg aagtacctgc acctcggagg cggtcagcaa ggctaaagaa taagagtgtc
      661 aacactcagc agctacccaa gccgaatcca gttcgtgtat catatcctgg aagactaaag
      721 gagaatcctg aaaagcttgg caccttcaag ctttacagaa aattcttgga ctctatgtcc
      781 atagttccta accagaatag atacatacga agacttctct ctacaaagga tcggatgccg
      841 gattccaaca aaattctact gagtgaagaa tgcacgaaat tactcagaga ctctctaccc
      901 acgaaactag gagatacggg gagattcaca ttcccgtttt ctatctacca atctggaacc
      961 attcacgctt tggctgattt aggagcaaac attaatctta tgccttactc tctttttaag
     1021 agattagagc taggagactt gttaccaaca aaagttacga tccaacttgc tgatcataca
     1081 attcattatc ccaaagacat agttgagaac attttggtaa aagttgaatg a
//
LOCUS       XM_071831654            1080 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841436), mRNA.
ACCESSION   XM_071831654
VERSION     XM_071831654.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1080
                     /gene="LOC139841436"
                     /note="uncharacterized LOC139841436; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841436"
     CDS             1..1080
                     /gene="LOC139841436"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687755.1"
                     /db_xref="GeneID:139841436"
                     /translation="MNLLSINIGGGMQYKHKQWWISRLSSEHSISILGIQESKFSSLC
                     HFVVKAMWGNYNFKVASSSSRGRSGGLITVWDPLFFTSNRIISFANVLIVEGCISGFS
                     SPVFIINIYAPQSHSNKRRIWEYLRNFVSENLGEFLIFGDFNSVRFTHEHFGNRFCPL
                     EVSDFNSFINDCNLFDVPLGGRSFTRSNKTFTQRSLIDRFLVSDGMLTMFPSLSGYIL
                     SNIWSDHCPIILQNENLDYGPIPFKLFHSWFLLEGFEEVVVNAWNTTPNGPNQQIQFK
                     NKLKGVKEALKVWNNDHKSKQQDEKNVLLTRLAAIDADIDANAIQPQHIPDRCEIIKS
                     IENLESIEAVNKAQKYRKVSNCLGD"
     misc_feature    7..690
                     /gene="LOC139841436"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,109..111,331..333,424..426,430..432,592..594,
                     670..675)
                     /gene="LOC139841436"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(109..111,670..672)
                     /gene="LOC139841436"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(331..333,430..432,673..675)
                     /gene="LOC139841436"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaatttat tatccattaa cattggtgga gggatgcaat ataaacataa acaatggtgg
       61 ataagtagac ttagttcaga acattcaatt agcattctcg gaattcaaga atcaaaattc
      121 tcttctttat gtcattttgt ggtgaaagca atgtggggta actataactt taaggttgca
      181 tcttcttctt caaggggtcg ttcaggaggt ttaataacag tttgggatcc cctgtttttt
      241 acttctaacc gtatcatctc ttttgcaaat gttctaattg ttgaaggatg tatatcggga
      301 ttttcttctc ccgttttcat catcaacatt tatgcacctc agtctcattc taataagagg
      361 agaatttggg aatatcttcg caactttgtt tccgaaaact taggggaatt ccttattttt
      421 ggagacttta actcggttcg gttcactcac gaacattttg gcaacagatt ctgcccacta
      481 gaagtgagtg attttaatag cttcatcaac gattgtaatt tattcgatgt cccgttaggc
      541 ggaagatcgt ttacccgttc taataaaaca tttacacaac gatctttgat tgacaggttc
      601 ctggtgtcgg atggaatgtt aactatgttt ccttctcttt cgggttacat tctgtctaat
      661 atttggtccg atcactgccc cattattctt cagaatgaaa atctagacta tggtcctata
      721 ccgttcaaac tttttcattc atggttcctt ttggaaggct tcgaggaagt tgttgttaat
      781 gcttggaata ctactccaaa cgggcctaat cagcagattc aattcaaaaa taaactcaaa
      841 ggtgttaagg aagctttgaa agtgtggaat aacgatcata aatcaaagca acaagatgag
      901 aaaaatgttc tccttacacg tttagctgca attgatgcgg acatagatgc aaatgctata
      961 caaccccaac acatccctga tagatgcgaa attataaaat ctattgaaaa tttggaatct
     1021 atagaagccg taaacaaagc tcaaaagtat agaaaggttt ctaattgttt gggcgattaa
//
LOCUS       XM_071831655            1044 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841437), mRNA.
ACCESSION   XM_071831655
VERSION     XM_071831655.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 75% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1044
                     /gene="LOC139841437"
                     /note="uncharacterized LOC139841437; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841437"
     CDS             1..1044
                     /gene="LOC139841437"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687756.1"
                     /db_xref="GeneID:139841437"
                     /translation="MVVFHFQYPVYFAFEDEDLQKVLSDIKKSDVAGQSATATTGGYK
                     LIVTSAAPKKLASPTITNIQGWLPGLKADGDSNQLPTIAIVASYDTFGAAPALSVGSD
                     SNGSGVVALLEIARLFSILYSNPNTRGRYNILFGLTSGGPYNYNGTQKWLRSFDQRLR
                     ESIDYAICLNTLGTQSPGENRLWVHVSKPPENAYVKQIFEGLSNVAEELGLKVGLKHK
                     KINVSNPRVAWEHEQFSRLRVTAATLSGLSVAPGLLENTGGLSDSREFVSENAVAQSV
                     KLVAESLARHIYGQEGKKVNIFADNSSLAVNPSYIGSWLYLLSRTPRVAPFLSKDDAL
                     IMSLKKVLTMTFY"
     misc_feature    1..870
                     /gene="LOC139841437"
                     /note="M28 Zn-Peptidase Nicalin, Nicastrin-like protein;
                     Region: M28_nicalin_like; cd03882"
                     /db_xref="CDD:349878"
ORIGIN      
        1 atggtggttt ttcattttca gtatcctgtg tattttgctt ttgaagatga agatttgcaa
       61 aaggtattgt cggatattaa gaaaagtgat gtagctggtc agtctgcaac agcaactaca
      121 ggcggataca agcttattgt cacgtcagca gctcctaaga aacttgcatc tcccacaatt
      181 acaaacatcc agggatggtt gcctggattg aaagctgacg gggattcaaa ccaactccca
      241 actattgcta tcgtagcatc atatgataca tttggtgcag ctccggcatt atcggttgga
      301 agtgatagta atggcagtgg tgttgtggca cttcttgaga ttgccagatt attttctatt
      361 ttatattcca acccaaacac gagaggaagg tataatatac tgtttgggct gacatccgga
      421 gggccttata actacaacgg aactcaaaag tggcttagaa gttttgatca gcgtctacga
      481 gaaagtattg attatgctat ctgcctaaat actttaggta ctcaaagccc aggcgaaaac
      541 aggttatggg ttcatgtgtc taaacctcca gagaatgctt acgtaaagca aatttttgag
      601 ggtttatcca atgtagcgga agaattgggc cttaaagttg ggctaaagca caagaaaata
      661 aatgtttcca atccccgagt agcctgggag catgaacagt tttcaaggtt aagagttact
      721 gcagccacac tttctggact atctgtagca cccggtttac tggaaaatac tggaggtcta
      781 tctgatagca gagagtttgt cagcgaaaat gcagttgccc agagtgtaaa attggtcgct
      841 gagagtttgg cgaggcatat atacggtcag gaggggaaga aagtcaatat atttgcagat
      901 aacagtagtt tggcggtcaa tccttcttac attggatctt ggctttacct tttgtcaaga
      961 acacctcgtg tggcaccttt tctttctaag gacgatgcac tcatcatgtc attgaaaaag
     1021 gtattaacca tgacgtttta ttga
//
LOCUS       XM_071831656             494 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841438), mRNA.
ACCESSION   XM_071831656
VERSION     XM_071831656.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..494
                     /gene="LOC139841438"
                     /note="uncharacterized LOC139841438; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841438"
     CDS             12..494
                     /gene="LOC139841438"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687757.1"
                     /db_xref="GeneID:139841438"
                     /translation="MENPVIAAPNKRRLMLESMYSVITIVFILVACVELCDASTVVDV
                     YRLIQYDLAGAPYGSRVSSLNHHAVSSLFAPGSDLSRTVVILPLRELNETFVREYIES
                     GKPLGGLLLLLPQFFNPEITPTDCLYVGKENLKDTLADLEKKLIRATIQVSEHTIYVQ
                     "
ORIGIN      
        1 taatttcatc aatggagaat cccgtgattg cagcaccaaa taagcgacga ctcatgctcg
       61 aatcaatgta ctccgtcatt acaattgtat tcattttagt cgcttgtgtt gaactctgcg
      121 atgcttctac cgtcgttgac gtttaccgcc ttattcagta cgatctcgcc ggagctccgt
      181 acggatctcg tgtttcgtca cttaatcatc acgctgtttc ttctttattt gctcctggtt
      241 ctgatctctc gcgtactgtt gttatacttc ctttacgtga attgaatgaa actttcgttc
      301 gagaatatat cgaaagcgga aagcctttag gaggactact acttctactt cctcaatttt
      361 tcaatccgga gatcactcca actgattgtt tatatgttgg taaggagaat ttaaaagata
      421 cattggcgga tttagaaaag aagctaatac gtgctactat tcaagtgagt gaacacacaa
      481 tatatgtgca ataa
//
LOCUS       XM_071831657            1923 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841439), mRNA.
ACCESSION   XM_071831657
VERSION     XM_071831657.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1923
                     /gene="LOC139841439"
                     /note="uncharacterized LOC139841439; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841439"
     CDS             1..1923
                     /gene="LOC139841439"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687758.1"
                     /db_xref="GeneID:139841439"
                     /translation="MVGKLLDGILTKTAPSRYKQKLAQPTIRATAVDNLFALITGDEV
                     IKLPAMAESTQCFIPRIAEYPLPRNLGISSIGVYDYTTDPEDFLTMFEGVMRLQHWED
                     ETACHMFPMVLQKMVRERFASLPPRSITSFLELRAKFVMQYQSLRSCSLSHLVAHEIT
                     MHQNESLSDFMKCYTIECQKIPDKPESHLVSGFIFCLDQRCFARLVHALRYDVPKTLH
                     QALVIAQKHLRAGKMGCPRIDNFQRNFRQQGGERKRNDNYQRQRGYENNNQKQQHGWK
                     GNNHPNDNYHQRKLLDRHLLIMALTKTPKEILFTELVKETFHPPPPMEERQGPQSDKW
                     CDFHEAYGHETDNCKSLMREIIAKIKAGELNHLLPGKKYRRNDPNKHFAWQGKVGHGG
                     RRDWNRRKERNDERDPTPEMHIKVIWNEMEENETDGERRTGNWMYAPIIFHTISNWRL
                     SEEPVVISAVIANKNITRIYNDTGSEADIFYLHCFSDYPFIVKDRLHYKSLKIVGIMG
                     ESMKAVGKVKLDVTLGIHPLVHTEIVDFTVLDGRSRFNALFGRRTLRKFGAITSTPHA
                     EMRFPTPNGVAVVHSEYVGSAREKSVVFEAQDNFVRGGPSRQLFSKNDVNGFFKPSKS
                     GNIECNTQHAARRTSC"
ORIGIN      
        1 atggtaggaa agttactaga tggaattttg accaagacgg caccatcaag atataagcag
       61 aaattagcac agcccaccat ccgtgcaacg gctgtagata atttgttcgc tttaattact
      121 ggagatgaag ttatcaaact accagcaatg gcagaatcaa cacaatgttt tatccctcga
      181 attgcagagt atccattacc aagaaatttg ggaatttcat ctattggtgt ttatgattac
      241 acaacagatc cagaagactt tcttaccatg tttgaaggtg ttatgagatt acagcattgg
      301 gaagacgaaa ctgcatgcca tatgtttcca atggtgctac agaaaatggt aagagaaagg
      361 tttgctagtt tgccacctag gagtattact agtttccttg agttaagggc aaaatttgtg
      421 atgcaatatc aaagtttgag aagctgctcg ttgtcacatc ttgttgcaca tgagataaca
      481 atgcaccaaa atgaatcact gagtgatttc atgaagtgtt ataccattga atgtcaaaag
      541 ataccagaca aaccagaatc tcatcttgtt tcagggttta tattctgcct tgaccagcga
      601 tgttttgcac gattggttca cgcgttgcga tatgatgtgc caaaaacatt gcatcaagca
      661 ttagttattg ctcagaagca tttgagagca ggaaaaatgg gatgtccaag aattgataat
      721 tttcaaagaa acttcaggca gcaaggcgga gagcggaaga ggaatgacaa ttatcagaga
      781 cagcgtgggt atgaaaataa taatcagaag caacaacacg gttggaaggg aaataatcat
      841 ccaaatgaca attatcacca gcgaaaacta ttagacagac atctacttat catggcttta
      901 accaaaactc caaaagagat cttgttcaca gaactggtta aggaaacttt tcaccctcca
      961 ccgccaatgg aagagcgtca aggaccacag agtgacaagt ggtgtgattt ccatgaagca
     1021 tatggacatg aaactgataa ctgtaagtca ttgatgaggg aaatcatcgc aaagattaaa
     1081 gctggggagt taaaccatct tttaccagga aaaaagtaca ggagaaatga tccaaataaa
     1141 cattttgctt ggcaaggaaa agtgggtcac ggtggacggc gtgattggaa cagaaggaaa
     1201 gaaagaaatg atgaaaggga tccaacccct gaaatgcaca tcaaggttat atggaatgag
     1261 atggaggaaa atgaaacaga tggagaacgt aggacgggga actggatgta tgctccaatc
     1321 atatttcata ccatttcaaa ttggcgtctg tcagaagagc ctgtggtcat ctcagctgta
     1381 attgcaaaca aaaacatcac tcgaatctat aatgatacag gtagtgaagc agatattttc
     1441 tatttgcatt gtttcagcga ctatccgttc atcgtgaagg ataggcttca ctacaagagc
     1501 ttgaaaattg ttggcattat gggagaatca atgaaggcag ttggtaaagt gaagctggat
     1561 gtaacgttgg gaatacaccc tttagtccac acggaaattg tggactttac ggttcttgat
     1621 ggcagatcaa gattcaatgc attgtttggt aggcgaactc ttcgtaaatt tggagcaatt
     1681 acttctacac cgcatgcaga aatgcggttc ccaacaccaa atggtgtggc agtagtacac
     1741 tctgagtacg ttggatcagc aagagagaag tcagttgttt ttgaagcaca agataacttt
     1801 gttaggggag gaccgtcaag acagttattt agcaaaaatg atgtgaatgg gtttttcaaa
     1861 ccatccaaaa gtgggaacat tgaatgcaat acgcaacacg ctgcacggag aacatcatgt
     1921 tag
//
LOCUS       XM_071831658            1449 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841440), mRNA.
ACCESSION   XM_071831658
VERSION     XM_071831658.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1449
                     /gene="LOC139841440"
                     /note="uncharacterized LOC139841440; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841440"
     CDS             1..1449
                     /gene="LOC139841440"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687759.1"
                     /db_xref="GeneID:139841440"
                     /translation="MSVRLVIQEVTYTVICAYAPHAGRGDAEKRHFWESLDEVVRMCP
                     PDHRLLIGGDLNGHIGTDVEGYAGVHGGSGYGVRNEEGLSILEFAVAHDLAVVNSFFK
                     KRDAQLATFHSGGHSTQIDYLLIRKGDLRTCEDCKVLTTLTCSSQHRLLVMDLVLQRR
                     ATKSVRQVQPKILWKKLNGEKAETFKTSVIGRVDAELEMVSNDNADQMWNCLASSIRE
                     IAKEALGVAVGTSRGYRAVRESWWFSDEVQSKVALKQLRFRELITGGEEGTPTDRIRA
                     EERYKEANREAKKAVALAKEKAYEDLYKQLDSKEGANDIYKIAKARERRRMDLDNIKS
                     INNEAGQTLVKEDEIRKRWEEYFSSLFVGGRPERHEDLQDADIEQSHNNIDCEMISQE
                     EVRLALRKMGRNKSVGPDQIPIEAWWYLGDTCVRWLTCLFNKMFRSSKMPMEWRLSET
                     ISIYKNKEDAQCCVLDVTAESKGFCAQMMLRA"
     misc_feature    <1..465
                     /gene="LOC139841440"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(52..54,166..168,442..444)
                     /gene="LOC139841440"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtcggtta ggttggtaat tcaggaggtg acttacacag taatttgcgc ttacgcaccc
       61 catgcgggcc gtggagatgc tgaaaagaga cacttctggg aatcgttaga tgaggttgtg
      121 aggatgtgcc ctccggacca tagattactt attggtggag atctcaatgg ccatatagga
      181 actgatgttg agggatatgc gggagtccac gggggttctg ggtacggagt tagaaatgag
      241 gaaggactct ctattctcga atttgctgtt gcccacgact tggcagttgt gaattcgttt
      301 ttcaagaaga gggatgccca gttagcaact tttcatagcg ggggtcatag tacccagatt
      361 gactatctgt taattcgcaa aggggatctt aggacttgtg aagactgtaa ggtcctgact
      421 accttgacat gctcctccca gcacagactg ttggtcatgg atttggttct acagagacgg
      481 gccaccaaga gtgtgagaca agtccaacct aagatcttgt ggaagaagtt gaacggagag
      541 aaggcagaga cctttaaaac atcggttata ggtagagtgg atgcagaatt agaaatggta
      601 tccaatgata acgcggatca aatgtggaac tgtctggcgt cctccattag agagatagcc
      661 aaagaagccc taggtgtggc tgtaggtaca tctagaggct atagggctgt tagggaatca
      721 tggtggttca gtgacgaggt tcaaagcaaa gttgcgctta agcaactaag gtttagggag
      781 ctcatcactg gtggggagga ggggaccccg acggatagaa ttagggctga agagagatat
      841 aaagaagcca atagagaagc taagaaggct gtagccctag caaaagaaaa ggcatatgaa
      901 gatctgtata agcaacttga ctctaaagag ggagccaatg atatttacaa gatagctaaa
      961 gctagggagc gaagacgcat ggatcttgat aacatcaagt ctatcaataa tgaagctggt
     1021 caaactctag ttaaggaaga cgaaattagg aaaagatggg aagagtattt ctcatctctc
     1081 ttcgtagggg gaagaccaga gcgacacgag gacttacaag acgctgatat agaacaatcc
     1141 cataacaaca tagattgcga gatgattagc caagaggaag taagattggc actacgaaag
     1201 atgggaagaa ataaatcagt gggaccggat cagatcccta ttgaggcgtg gtggtacctg
     1261 ggcgacactt gtgttaggtg gttgacttgc ctttttaaca agatgtttcg aagctctaaa
     1321 atgcctatgg aatggagact gagtgagact atttccatct ataagaacaa ggaggatgct
     1381 caatgttgcg ttttagatgt aactgcagaa agcaagggat tctgtgcaca gatgatgctg
     1441 agagcttaa
//
LOCUS       XM_071831659             957 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841441), mRNA.
ACCESSION   XM_071831659
VERSION     XM_071831659.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..957
                     /gene="LOC139841441"
                     /note="uncharacterized LOC139841441; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841441"
     CDS             1..957
                     /gene="LOC139841441"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687760.1"
                     /db_xref="GeneID:139841441"
                     /translation="MEGLNLAFHRTMEIGFIRGFKVGMDNIHLSHFIYADDASLISSG
                     GRLTLVKSVMGSLGIYLMSLFKCPETVLKRLESIRAIFFWGGSNSVKKMSWLKWDKVL
                     ASFDKGGLNVGSLKAFNLALLFKWRWRDIVGGRIEQYLKVLLEEIGCPILRDRPDSWV
                     CNLSDDGSYMVKDAREYCILVRWNLSAKGIDIDSIVYPNCNNGVETRDHLFFDCDVAR
                     DLWLRIRIWLGCGLPHFSSWDLFVVWLEGVRLTVSSKNRIIAVMVTSLWAIWRFRNDV
                     VFQDSFCSKNSLFDVIRLFSFHWIKNRGHLVSNWNFWLSMPV"
     misc_feature    <532..660
                     /gene="LOC139841441"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaaggcc tcaatctcgc ttttcatcgc acaatggaaa tcggttttat ccgtgggttc
       61 aaagttggga tggataacat tcatttatct cattttatct acgctgatga tgcgagtcta
      121 atctcatcgg gaggtagatt gactttggtt aaatcggtta tgggaagtct tgggatatac
      181 cttatgtctt tgttcaaatg tcctgagacc gttcttaaaa gacttgaatc gatccgggct
      241 atattctttt ggggcggaag caactcggtg aaaaagatgt cgtggttaaa gtgggacaaa
      301 gttctagctt catttgataa aggtgggctt aatgtcggga gtttaaaagc ttttaactta
      361 gctcttcttt tcaaatggag gtggcgggat attgtaggcg gccggattga acaatatctt
      421 aaagttttac tcgaagagat aggatgtcct attttacgcg atcggcctga ttcttgggtc
      481 tgcaatctta gcgatgatgg gtcttacatg gtgaaagatg ctagggaata ctgcattcta
      541 gttcgctgga acctttccgc taaaggtata gatattgact ctattgttta tccgaattgt
      601 aacaatggag tcgagacccg ggatcacttg tttttcgatt gtgatgtggc tcgtgattta
      661 tggcttagaa ttcggatttg gctcggttgt ggtttgcctc atttttcctc ttgggatttg
      721 tttgtggttt ggctagaggg tgttcgatta acggtttctt caaagaatcg gatcattgcg
      781 gtcatggtta catctttgtg ggctatatgg cgtttcagga acgacgttgt ttttcaagat
      841 tctttttgtt ctaaaaatag tttatttgat gttattagac ttttttcttt tcattggatt
      901 aaaaatagag gccatttagt ttctaactgg aacttttggt tgtctatgcc cgtgtaa
//
LOCUS       XM_071831660            1959 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841442), mRNA.
ACCESSION   XM_071831660
VERSION     XM_071831660.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1959
                     /gene="LOC139841442"
                     /note="uncharacterized LOC139841442; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841442"
     CDS             1..1959
                     /gene="LOC139841442"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687761.1"
                     /db_xref="GeneID:139841442"
                     /translation="MDPFTDSGLDKGGGSGGKFSFFEEAVKDLEGLVRVEGKLIGSKT
                     LPKVNEKTKARSRKVWLASMPLFVILFRGFIFLMKLRGYIKVTVLPNQTQLLQIRISI
                     VPALRCGSLMVDKRKWVKDLCISLNVQFLAIQESKMSRLHMSRLRTFWGNHNFDFALS
                     LARGYSGGIISLWDPNVFIRSDIWCDDNFVIVKGTWLQVNLDVFMVNVYAPQALADKV
                     LLWAKISNFIDAHPGEYILMGDWNSVRSIDESCGSIFCTHDARAFKDFIDHNAFYDMP
                     LGGLQFTWCNKPGNKFSKIDRFFVTNNVFNVVDDLKGLVLPRGYSDHSPILLFQDKVD
                     FGPTYFKIFDSWFSRPDFELTVRKAWDIISIEANMDIVAKFRLLKGHLKSWIHSSRST
                     EAKRLKELKDNIIELDAIIDSGNASSNEVNLRNSLAFEKDDISKMFDLDMLQKASGVL
                     VDGVWFNDPNVIKSKFFDHFEAKFIDHGSDVSSGHVTPHAQISVADVNEIDKDVDDEE
                     IKNAVWNCGSSKAPGPDVGCFYKVVTKILTNRLQRVIDKIISPVQSAFIAGRQILDGP
                     LMLSEILSWYKYKNKKMLLFKVDFEKAYDSVNWEYLLFMLSSLGFSEKWCSWIKGCLF
                     SARTSVLINGSPTREFMLKKGFETGGST"
     misc_feature    340..984
                     /gene="LOC139841442"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(403..405,625..627,718..720,724..726,886..888,
                     964..969)
                     /gene="LOC139841442"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(403..405,964..966)
                     /gene="LOC139841442"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(625..627,724..726,967..969)
                     /gene="LOC139841442"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    1582..>1818
                     /gene="LOC139841442"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggatcctt tcacggatag tgggttggac aaaggaggag ggtcgggtgg aaagtttagt
       61 ttctttgaag aggcggtgaa ggatttggaa ggtttggttc gggtggaagg aaagttgatc
      121 gggtcgaaga cgcttccaaa ggttaatgag aaaacaaagg cgcggtcaag gaaagtttgg
      181 ttggcctcga tgcctttgtt tgtaatcttg ttccgaggct tcattttttt gatgaagctt
      241 cgtggttata taaaagttac ggttttgccg aaccaaaccc aactgctaca aattagaatc
      301 agcattgttc cagctcttcg ttgcggatct ttgatggttg ataaaagaaa atgggttaag
      361 gatttatgta tttcgttgaa tgttcaattc ttggccattc aagaatcgaa gatgtctcgg
      421 ttgcatatgt ctcgtctccg tactttctgg gggaatcata attttgactt tgctttaagt
      481 ttggctcgtg ggtattcggg tggtattatt tcgctttggg atccgaatgt ttttattcga
      541 agcgatattt ggtgtgatga taactttgtt attgtcaagg gtacttggtt acaggtgaat
      601 ttagatgtgt ttatggtcaa tgtttacgct cctcaagctt tggcggataa agttcttctt
      661 tgggcgaaaa tttcgaattt tattgatgct catccgggtg agtatattct catgggcgat
      721 tggaattcgg ttagaagtat tgatgaaagt tgtggctcta ttttttgtac tcatgatgcc
      781 agagctttta aagattttat agatcataat gctttttatg atatgccttt aggtgggctt
      841 caattcacgt ggtgtaataa accgggtaac aaatttagta aaattgatcg tttttttgtt
      901 actaataacg tgtttaatgt tgtcgatgat ttgaaaggtt tggtcttgcc ccggggatac
      961 tcagatcact ctcctattct tttgtttcaa gacaaagtag actttgggcc gacttacttt
     1021 aagatatttg attcttggtt ttctcgtcct gatttcgagt taacggttcg taaggcttgg
     1081 gacattatta gtattgaggc taatatggat attgtggcta aattcagatt attgaaagga
     1141 catcttaaaa gttggatcca ctcttccagg tctacggaag ctaaacgttt gaaagagtta
     1201 aaggataata tcattgagtt agatgctatc attgattcgg gtaatgctag cagcaatgaa
     1261 gttaatctga gaaattcctt ggctttcgaa aaagacgata tttctaagat gtttgatctc
     1321 gacatgctcc aaaaagcttc tggtgttctt gtagacgggg tttggttcaa tgatccgaat
     1381 gtgattaaat ccaagttctt tgatcatttt gaagctaagt tcattgatca tgggtctgat
     1441 gtgagctccg gtcatgttac tcctcatgca cagatttctg ttgctgatgt gaatgagatt
     1501 gataaagatg ttgatgatga ggagattaaa aatgcggttt ggaattgtgg tagttctaag
     1561 gcaccgggcc cggatgtcgg ttgtttttat aaagtggtca caaaaatatt gactaatcgg
     1621 cttcaacgtg ttatcgataa gattattagt ccggttcaat cggcttttat tgcaggtcgt
     1681 cagattcttg atggccctct tatgttgagc gaaattttat cttggtataa atataaaaat
     1741 aagaagatgc ttctgtttaa agttgatttt gagaaagctt atgattcggt taactgggag
     1801 tacctcttat ttatgctttc gtctctcggt ttcagtgaga agtggtgttc ttggattaag
     1861 ggatgtcttt tttcagctag gacttcggtc ttaattaatg gcagcccgac tcgtgaattt
     1921 atgctgaaaa aggggtttga gacaggggga tccacttag
//
LOCUS       XM_071831661            1056 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable transcription
            factor PosF21 (LOC139841443), mRNA.
ACCESSION   XM_071831661
VERSION     XM_071831661.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1056
                     /gene="LOC139841443"
                     /note="probable transcription factor PosF21; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139841443"
     CDS             1..1056
                     /gene="LOC139841443"
                     /codon_start=1
                     /product="probable transcription factor PosF21"
                     /protein_id="XP_071687762.1"
                     /db_xref="GeneID:139841443"
                     /translation="MENNQSHNPCGMNTLPPFGSKESMKSDSIMSPEKGFGTATETGQ
                     CSHDDISRMPDTPPKYTGHRRAHSEIFTLPDDISFDYESDLGIVGDGPEETEEDLFSM
                     YVDMENLKSSSAKPGPQVEDSSKTSATSLPEHHVKHQHTMSMGENTFKQEDASLTDYK
                     KSLSATKLAELAIVDPKRAKRIWANRQSAARSKERKIRYIAELEKKVHALQTDGTSMS
                     AQLNLLQRQTHGLSAENNELKLRIHGMEQQVNLQDALNDGLKKEIQHLKVVTGQNLTN
                     GGPVMNYPPPFGLNQWFHPNNQAAATQTMLTAQQFQQLQIQSRNQHQHLFQQPQFNQQ
                     QQHQRQQFQQQQQQKFG"
     misc_feature    532..681
                     /gene="LOC139841443"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; Region: bZIP_plant_RF2; cd14703"
                     /db_xref="CDD:269851"
     misc_feature    532..681
                     /gene="LOC139841443"
                     /note="coiled coil [structural motif]; Region: coiled
                     coil"
                     /db_xref="CDD:269851"
     misc_feature    order(541..546,550..558,562..579,583..591)
                     /gene="LOC139841443"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     misc_feature    order(586..588,595..600,607..612,616..621,628..633,
                     637..642,649..654,658..663,670..675,679..681)
                     /gene="LOC139841443"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:269851"
ORIGIN      
        1 atggaaaata atcaatccca taacccttgt ggaatgaata ccttgccacc ttttggcagt
       61 aaagaaagta tgaaatccga ctcgattatg tcacccgaaa aggggtttgg aaccgcgact
      121 gaaacgggtc agtgcagtca tgatgatata agcagaatgc ctgatacccc acctaagtat
      181 acgggccaca gacgagccca ttcggaaata tttacattac ctgatgatat tagctttgat
      241 tatgaaagtg atcttggtat tgtgggtgat ggtcctgaag aaactgaaga agatttgttt
      301 tctatgtatg ttgacatgga aaatttgaaa tcttcatctg caaaaccggg cccacaagtt
      361 gaagattcat ctaaaacgtc tgcaacatcg ttacctgaac accatgttaa acatcagcat
      421 acaatgtcta tgggcgagaa tacatttaag caggaagacg cgtctttaac tgactataaa
      481 aagtcattgt ctgctacaaa gcttgctgaa cttgctatcg ttgatccaaa gcgtgcaaaa
      541 aggatatggg cgaataggca gtcggctgca agatcaaagg aacggaaaat aagatacatc
      601 gctgagcttg aaaaaaaagt ccatgcgctg caaacagatg gaacatcaat gtctgctcag
      661 ttaaaccttt tgcagagaca gacgcatggt ttgtcagctg aaaacaacga actgaaactg
      721 cgtatacatg gcatggagca acaggttaac ttacaagatg ctttaaatga tgggctgaag
      781 aaggagatac aacatctgaa agtagttaca ggtcagaatc tcacaaatgg tggaccagtg
      841 atgaattatc ctccaccttt tggactaaac caatggtttc accctaacaa ccaagcagca
      901 gctacgcaaa caatgttaac ggctcaacag tttcagcaac tccagattca atcccggaac
      961 cagcatcagc atctatttca acaaccacaa tttaatcagc agcaacagca tcaacgacaa
     1021 caatttcagc agcaacagca acaaaaattt ggttaa
//
LOCUS       XM_071831662             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841444), mRNA.
ACCESSION   XM_071831662
VERSION     XM_071831662.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139841444"
                     /note="uncharacterized LOC139841444; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139841444"
     CDS             1..501
                     /gene="LOC139841444"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687763.1"
                     /db_xref="GeneID:139841444"
                     /translation="MKGSGAVDINGYRLWFSGSRIARNGVGIIIGPAYKDYVVDISRC
                     SDRIMSVKLIIQEVTYTVISAYAPHVGLGEVEKRHFWESLDEVVRRCPTDQRLIIGGD
                     LNGHVGTEVEGYAGIHGRFGYRIRNEEGRSILDLVIAHNLVVTNSFFRKTDAQLETFH
                     SEGHST"
     misc_feature    <28..>456
                     /gene="LOC139841444"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgaaggggt cgggggcggt agatattaat ggatataggc tgtggttctc gggttctagg
       61 atagcgcgaa acggggtagg aattattata ggacccgctt ataaggatta tgttgtggac
      121 attagtaggt gtagcgatag gattatgtcg gttaagttaa taattcagga ggtgacttac
      181 actgtcatta gcgcttacgc acctcatgta ggtttaggag aagtagaaaa gagacacttt
      241 tgggaatcgt tagatgaggt ggtaaggagg tgcccaactg accagcgttt gataattggg
      301 ggagatttaa atggtcatgt aggaactgag gtggaaggat atgcgggtat ccatggtaga
      361 tttggttaca gaataagaaa tgaagaaggc cgctcaattc tcgatttagt cattgctcac
      421 aatttggtgg ttacaaactc cttctttagg aagacggatg ctcaattaga aaccttccat
      481 agtgagggtc acagtacata a
//
LOCUS       XM_071831663             681 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841445), mRNA.
ACCESSION   XM_071831663
VERSION     XM_071831663.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..681
                     /gene="LOC139841445"
                     /note="uncharacterized LOC139841445; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841445"
     CDS             1..681
                     /gene="LOC139841445"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687764.1"
                     /db_xref="GeneID:139841445"
                     /translation="MVAERVGVEVEDVSHDDVDRMWNCMASTIREVAKESLGVAVGNL
                     RGHKSSRESWWLSDEVQTKVAVKQLRFRELITMRDGTLADRTRAEESYRVAKREAKKA
                     VARAKEKAYEGLYRKLDSKEVANDIYRIAKARERRKKDLDSIIFIKDEVGRTMVKEVD
                     IRKRWEEYFSSLFDGRGSRSHDETEDSVLRHYQNYSFCQRIHHEEVRLALRKMGRNKS
                     VGPDQIPI"
ORIGIN      
        1 atggttgccg aaagagtcgg tgtagaagta gaagatgtat ctcatgacga cgtggatcgg
       61 atgtggaatt gcatggcatc caccattaga gaagtagcaa aggaatcttt aggggtagca
      121 gtaggaaatc tgagaggaca taagtctagt agagaatctt ggtggcttag tgatgaggtc
      181 caaaccaaag ttgcggttaa gcaactgagg tttagggagc tcatcacaat gagggatggg
      241 acacttgctg atagaactag agctgaagag agctatagag tagctaaaag agaagcaaag
      301 aaggcagttg cgcgtgctaa agaaaaggca tatgaaggtt tatataggaa actagattca
      361 aaggaggtag ctaatgatat ctataggata gccaaggcta gggagcgaag gaagaaggac
      421 ctagatagca tcatttttat taaagatgaa gttggtcgca ccatggtgaa ggaagttgat
      481 attaggaaaa gatgggagga gtatttctct tccctttttg acgggagagg atcaaggagt
      541 cacgatgaaa ctgaggactc ggttttaaga cattaccaga actacagctt ctgtcagagg
      601 atacatcatg aggaagtaag gttggcactt cgaaagatgg ggagaaataa atcagtaggt
      661 cctgatcaga ttcccattta g
//
LOCUS       XM_071831664             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841446), mRNA.
ACCESSION   XM_071831664
VERSION     XM_071831664.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139841446"
                     /note="uncharacterized LOC139841446; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841446"
     CDS             1..504
                     /gene="LOC139841446"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687765.1"
                     /db_xref="GeneID:139841446"
                     /translation="MKLWERVIETRLRRETTVSENQFGFMPGRSSIEAIHIIRSLMEK
                     YREKHKSLEMVFLNLEKAYDCVPRELIWKKLDGRGIQSSYIRVIQDMYEGAMSCVRTP
                     VGSTEFFPNKISESKEELNRRLELWREVLERNGLRISRQKTEYLRCDFDGNEDEHSDG
                     VNISIRG"
     misc_feature    1..471
                     /gene="LOC139841446"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(172..189,241..243)
                     /gene="LOC139841446"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    244..246
                     /gene="LOC139841446"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgaagcttt gggagagagt gatcgagact agactcagac gggaaaccac agtttcagag
       61 aaccaatttg ggttcatgcc agggcgatct tccatagagg cgattcatat tattaggagt
      121 ctgatggaaa agtataggga aaaacataag agcttagaga tggtttttct taacttagag
      181 aaagcctatg actgtgtccc acgagagttg atttggaaga aacttgatgg tagaggcatc
      241 cagagtagtt atattcgagt tattcaggat atgtacgaag gggcaatgtc gtgtgtaaga
      301 acgcctgtag gaagcacaga gttttttccc aataaaatat cggaatcaaa ggaggagctt
      361 aatagaagac ttgagctttg gagggaggtc ctagaacgaa atggtctacg gattagtagg
      421 caaaagacgg aatatcttag gtgtgatttc gatgggaacg aagatgaaca tagtgatggt
      481 gtgaatatca gcattagggg ctag
//
LOCUS       XM_071831665            1947 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841448), mRNA.
ACCESSION   XM_071831665
VERSION     XM_071831665.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1947
                     /gene="LOC139841448"
                     /note="uncharacterized LOC139841448; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841448"
     CDS             1..1947
                     /gene="LOC139841448"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687766.1"
                     /db_xref="GeneID:139841448"
                     /translation="MSGPNEACGSDQQVDTTSSSNEASGSDHQKDDNNVDQSVVRRFT
                     RPKSIPKKLSFFCREYYRAWSKSPCEPETSLICYLLCYLCAAGSRRLPELPCSYKAVF
                     DFQPVGILLFLLLLITGKINSSHTHGYLRSCPISLGAGRSRGSRDTRVRIRVGSWNVG
                     TLTSKAHELVNTLRKSKVDILCVQETRWRGEEAVDVDDYRLWFSGSRVARNGVGILIG
                     PLYKDNIVGVDRCSDRIMSVRVVIQEETYMVICAYAPHAGLGDDEKVRFWEALDEVVR
                     SCPADHRLVIGGDLNGHIGTISDGYTGVHGGFGYGVRNEEGRSILEFAVAHELVVANS
                     FFRKTEAQLATFHSGGHSTQIDYLLLRKGDLRACRDCRALTTWTCSTQHRLLVMDLVL
                     QRRVTKRVRPVQPRILWKNLIEGKAETFKTSVLERVEAGMDTVTQMDADQMWNRMASA
                     IRDVAKETLGVAVGTSRGHKSNRESWWISDEVQTKVALKQQRFKELITCRDGTREDRT
                     RAEERYKEANREAKKAVARAKDKAYEDLYRKLDSKEGANDIYRIAKARERRRRDIDNI
                     KFIKDEAGQTLVKEEEIRKRWEGYFSTLFVGEGPGRQEVPQDLGIGQFRNNSFCRRIR
                     KEEDACGKHRVFPDRSRLAPGIDP"
     misc_feature    460..1170
                     /gene="LOC139841448"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(472..474,553..555,757..759,865..867,871..873,
                     1066..1068,1144..1149)
                     /gene="LOC139841448"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(553..555,1144..1146)
                     /gene="LOC139841448"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(757..759,871..873,1147..1149)
                     /gene="LOC139841448"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    <1435..>1746
                     /gene="LOC139841448"
                     /note="cell envelope integrity inner membrane protein
                     TolA; Provisional; Region: tolA; PRK09510"
                     /db_xref="CDD:236545"
ORIGIN      
        1 atgtctggac ctaatgaagc ttgtggcagt gatcaacaag ttgataccac tagttcatca
       61 aatgaagcta gtggcagcga tcatcagaaa gatgacaaca atgttgatca aagtgttgta
      121 agaaggttca caagaccaaa aagtattcca aaaaagttga gttttttttg cagggaatat
      181 taccgagctt ggagcaaaag tccttgcgaa ccagaaacct cgctaatttg ctatctgctc
      241 tgctacctct gtgccgccgg tagccgccgg ttgccggaac tcccttgttc ttacaaggcc
      301 gtctttgatt ttcaacctgt aggaatcctg ttattcctgt tactacttat tacgggtaag
      361 ataaactcgt cacatacgca tggttacttg aggtcatgtc ctattagttt aggggcgggt
      421 aggtctagag ggagtagaga tactcgcgtt aggattagag taggtagttg gaatgtagga
      481 actttgacta gcaaagccca tgaacttgta aatacgctac gtaagagtaa agtggacata
      541 ttgtgtgttc aagagaccag atggaggggt gaagaggcgg ttgacgtgga cgactacagg
      601 ttgtggttct cgggttctag agtagctaga aacggggtag ggatccttat aggacccctt
      661 tataaggata atattgtggg tgtggatagg tgtagcgata ggattatgtc ggttagggta
      721 gttatccagg aggagactta catggtcatt tgcgcttacg caccccatgc tggtttagga
      781 gatgatgaaa aagttcgctt ttgggaagcg ttagatgaag ttgtgaggag ttgccccgcc
      841 gaccatcgat tggttattgg gggagacctt aatggtcata taggaacgat ctcggacgga
      901 tatacgggtg tccatggggg ctttgggtac ggagttcgga atgaagaagg acgatctatt
      961 ctcgaattcg ctgttgccca cgaactggtt gttgcaaact ccttctttag gaagacggaa
     1021 gcacaactag ctactttcca cagtggggga catagtaccc agattgacta tttgctgctt
     1081 cgcaaagggg accttagagc ttgcagagac tgtagagccc tgactacctg gacttgttcc
     1141 acccaacaca gattattggt catggacttg gttctgcaga ggcgggttac taaaagagtg
     1201 agacccgtcc aacctaggat cctttggaag aatctgattg aagggaaagc cgaaactttt
     1261 aaaacttcag tgttggaaag agtagaggca ggaatggata ccgttactca aatggacgca
     1321 gatcagatgt ggaataggat ggcatctgct attagggatg ttgccaagga aaccttaggt
     1381 gtggcagtag ggacatcgag aggacataag tctaatagag aatcatggtg gattagtgat
     1441 gaggttcaaa ccaaagtcgc acttaagcaa cagaggttta aggagctcat tacatgccgg
     1501 gacgggacac gtgaagatag aactagggca gaagagaggt ataaagaagc caacagagaa
     1561 gctaagaagg ccgttgcccg tgcaaaagat aaagcgtatg aagacttgta taggaaacta
     1621 gactccaaag aaggagcaaa tgatatttac aggattgcaa aagctaggga gcgtaggagg
     1681 agggatatag ataacatcaa gtttatcaag gatgaagccg gtcaaacctt agtgaaggaa
     1741 gaagaaatta ggaaaagatg ggaagggtat ttctcaactc ttttcgtggg tgaaggacct
     1801 gggcgccaag aagttccgca ggacttggga ataggacaat tccggaacaa cagtttctgt
     1861 aggagaatca ggaaggaaga agacgcctgt gggaaacaca gagtatttcc cgatagaagt
     1921 aggcttgcac cagggatcga cccttag
//
LOCUS       XM_071831666             933 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139841450), mRNA.
ACCESSION   XM_071831666
VERSION     XM_071831666.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..933
                     /gene="LOC139841450"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139841450"
     CDS             1..933
                     /gene="LOC139841450"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071687767.1"
                     /db_xref="GeneID:139841450"
                     /translation="MAYGTTPDMFDEYIKIGEKTAALCLDYFCKCVFHLFAREYLRKP
                     TTEDIARLYNFHAQKHGLPGILGSIDCMHWEWKNCPVAWQGQYTRGDKKGPSIMLEAV
                     ASQDLWIWHGFFGMAGANNDINVLNASPLFNSIKDGTAPPSPFDVNGHHYDRGYYLGD
                     GIYPDWAMLVKAPHSPIDKPRKKFKRFQESARKDIERAFGVLQGRFAMLKTPARSLDF
                     NKIRRHMYACLVLHNMIQENNGFFIGRREERMIERNLPRRLQRDLRDRDARVKEIRDR
                     QVHRQLEADLNEHVWNLSPYFRTANDEYFRLVNL"
     misc_feature    115..720
                     /gene="LOC139841450"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcgtatg gaactacacc tgatatgttt gacgaataca taaaaattgg tgagaaaact
       61 gctgctttat gtttagatta tttttgcaaa tgcgtatttc atttgtttgc gagagagtat
      121 ttgagaaagc caacaaccga agatattgct cggctttata attttcacgc acaaaaacat
      181 ggtttacccg gtattcttgg tagtattgat tgtatgcact gggagtggaa gaattgtcct
      241 gttgcgtggc aaggacaata tactagaggg gataaaaagg gaccatccat tatgcttgaa
      301 gcagtcgcat ctcaagattt gtggatatgg catggtttct ttggtatggc aggtgcaaac
      361 aacgacatta acgttttaaa tgcctcaccg ttgttcaaca gtataaagga cggcaccgct
      421 cctccttcac catttgatgt aaatggacat cactacgata gagggtatta cctaggtgat
      481 ggtatatacc ctgattgggc tatgttggtc aaagcacccc attctcctat tgacaaaccg
      541 cgaaaaaaat ttaaacggtt tcaagaaagt gccagaaaag atattgagcg tgcatttgga
      601 gtattacagg gtagatttgc aatgttgaaa acaccggcaa gatctttgga cttcaacaaa
      661 attagaagac atatgtatgc atgtctcgta ttacataaca tgattcaaga aaataacgga
      721 ttttttatag gtaggagaga agaaagaatg atagaaagga acctaccacg acggttacaa
      781 agggatttga gggatcgaga tgcaagggtt aaggaaataa gagataggca agttcacaga
      841 cagttagaag cagatttaaa cgagcacgtt tggaacttat ccccttactt tcgtactgct
      901 aacgatgagt attttcgttt agtgaattta taa
//
LOCUS       XM_071831667            1017 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841451), mRNA.
ACCESSION   XM_071831667
VERSION     XM_071831667.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1017
                     /gene="LOC139841451"
                     /note="uncharacterized LOC139841451; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841451"
     CDS             1..1017
                     /gene="LOC139841451"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687768.1"
                     /db_xref="GeneID:139841451"
                     /translation="MAYSSSSDEYTMLALEMLEADQSDEGDSSNVRLTRRYIRRDHHE
                     AHDRLIRDYFAERPKPDCRGELGISTHLKITATLHQLAYGYAPDELDEYLQMSERVAR
                     ESLQNFMKCIVVLYSNDYMREPTREDMERLYEVHEENHDFPGMLGSNNDINVLNTSSL
                     FESMLNDNFPDIPYVINGVEYKRGYYLADEIYPQWASFVKAYSSAANPKSKYFSRKQS
                     KARKDVERTFGILQGRWHILQQPARAYSLKAIQRIMYACIIMHNMIVGDNGFNISENN
                     WVYEPVQNMQTTWYDRCEEYKARTKELHDREVHERLRGDLIEHVWAIRAQEEEEEDED
                     EGEE"
     misc_feature    <418..807
                     /gene="LOC139841451"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcttatt catcttccag cgatgagtat acgatgcttg cactcgaaat gttagaggcc
       61 gatcaaagtg atgaggggga tagttctaat gttcgtttaa cgcgacgcta tatcagacgt
      121 gatcaccatg aagcacatga tcgcctcata agagactatt ttgctgaacg tccgaaacct
      181 gattgccgtg gcgagttagg cattagtaca catttaaaaa taacggcgac acttcatcag
      241 ttggcatacg gttatgcacc cgatgagtta gacgagtatt tacaaatgtc ggaacgtgta
      301 gctcgtgaaa gtttacagaa ttttatgaaa tgtattgttg ttttatattc aaatgattat
      361 atgcgcgagc ctacccgtga ggacatggaa cgtttatacg aggttcatga ggaaaatcat
      421 gactttcccg gcatgctagg gtcaaacaat gacataaatg tgttaaatac cagttctttg
      481 ttcgaatcga tgcttaatga taatttccca gacatccctt atgttattaa tggtgtggag
      541 tacaaaaggg gttattattt agcggatgag atttaccctc aatgggcatc gtttgttaaa
      601 gcgtattcga gtgcagctaa tcccaagagt aaatactttt cacgtaaaca atctaaggca
      661 agaaaggatg ttgagaggac ttttggtatt ttacaaggac gttggcatat actacaacaa
      721 cctgcaaggg cttactcgtt gaaagctatt caaagaatta tgtatgcgtg tatcataatg
      781 cataacatga tagttggaga taatgggttc aacatttctg agaataattg ggtgtatgaa
      841 ccggttcaga acatgcaaac tacttggtac gatagatgtg aagagtataa agccaggacg
      901 aaggaattac acgatcggga ggtgcatgaa cgtttacgag gcgatttaat cgaacatgtt
      961 tgggctattc gagctcagga ggaggaagag gaggatgagg atgaggggga agagtga
//
LOCUS       XM_071831669            1134 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841453), mRNA.
ACCESSION   XM_071831669
VERSION     XM_071831669.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1134
                     /gene="LOC139841453"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139841453"
     CDS             1..1134
                     /gene="LOC139841453"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687770.1"
                     /db_xref="GeneID:139841453"
                     /translation="MASELSTTLPPVIITNILCRLPAKSVGRFRCVSKDWLSQLSSYK
                     FIKNHESTLNQKHVIFNSLFELSLYTIPFNPHEKIPKKLRYRLWFQHFHGCCNGLVSW
                     SAAFLNENYMLRHIIINPTTKEIARLPVSGDEIIDGISNGKIVYGFGYDSLTDDYKVV
                     TISNIHRDNLVNVDVTMRVHVFDAGVFSNGFLHWLEINDNKHLGNIVAFSLLDEKFNE
                     MTIPKIDFVYDKNCKLIDLGGKFGLFLEQKREVWLMNEYGVNESWTKILLHGFNETRM
                     IFRPMIFGYNGKFMVVGKNRRFIYDVEGSFSENVEISHNFHLIVVGSYVESLVSPQSL
                     QGVTEGTLNLNSGGSTLASVESGDPTSLEDFLQTFLQVVGRLV"
     misc_feature    25..135
                     /gene="LOC139841453"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(25..27,37..39,46..51,58..63,73..75,79..84,94..102,
                     106..108)
                     /gene="LOC139841453"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    280..801
                     /gene="LOC139841453"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggcgtccg aactcagcac cacgcttcca ccggtgataa tcaccaacat cttatgtcgt
       61 ctccctgcga aatcggttgg tcgtttcagg tgcgtttcaa aggattggct atctcaactc
      121 tcatcataca aatttatcaa aaaccatgaa agtaccctca accaaaaaca cgtcatattt
      181 aactccctct ttgaactttc attatataca atcccattta atccccatga aaaaatacca
      241 aaaaaattac gctatagatt atggttccaa cattttcatg gttgttgcaa tggccttgtt
      301 tcttggtcag cagctttttt aaatgaaaat tacatgctta ggcacatcat tatcaaccca
      361 acgactaagg aaatcgcgag attacccgta tcaggagatg agataataga cggtatctca
      421 aacgggaaaa ttgtgtatgg atttggttat gattcgttaa ccgatgatta caaggttgtt
      481 acaatctcta acatacatag ggacaatttg gtcaatgttg atgttactat gcgcgttcat
      541 gtttttgatg caggcgtatt ttcgaacggg tttcttcatt ggttagaaat aaacgataac
      601 aagcatttag gcaacattgt tgcatttagt ttgttggatg agaaatttaa cgaaatgacg
      661 atacccaaaa ttgatttcgt gtatgataaa aattgcaaac tcattgatct tggtggaaag
      721 tttggtttat ttttggaaca gaaacgggaa gtttggttga tgaatgagta tggggtcaat
      781 gaatcttgga ctaagatttt actccatgga ttcaatgaaa cgaggatgat atttcgacct
      841 atgatttttg gttacaatgg aaaatttatg gttgttggca aaaaccgaag gtttatatat
      901 gatgttgaag gaagcttctc tgaaaatgtt gagatttctc ataactttca cttaattgtt
      961 gtcggtagct atgttgaaag cctcgtctcc ccgcaaagct tacaaggagt aacagaaggg
     1021 accttaaacc tgaacagtgg cggatctacc ttagcgagtg tggagtctgg tgaccccact
     1081 agtttggaag attttttaca aacttttctt caagttgttg gccgtttagt gtaa
//
LOCUS       XM_071831670             912 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841454), mRNA.
ACCESSION   XM_071831670
VERSION     XM_071831670.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..912
                     /gene="LOC139841454"
                     /note="uncharacterized LOC139841454; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841454"
     CDS             1..912
                     /gene="LOC139841454"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687771.1"
                     /db_xref="GeneID:139841454"
                     /translation="MRCIGPIEAEMIVDEVHNGSCALYSGYKTIAAKIMRMGYFWPSL
                     YRDVAKIVKCCKSYQRHAPQNRMPRHDMIPVNSPLPFHNWAIDIVGPFPAGPGNVKFL
                     IVAIDYFQKWVEAKAVRTITRVQVRNFVWEYIVLAHPQANGLCEVTNRDIVSGIKRRL
                     YEKRSGWVDELPNVLWAHHTTFKKSTGETPFSLIYGSKAAILAEILVPTHRVANFDEE
                     ENGEALCENLNLIEERRLSCYQGGEWVLRNNDASRAEKLGKSGPNWEGPYQVVAISAT
                     GSYKLADIEGRNLPNAWHAALLKRYYA"
     misc_feature    22..192
                     /gene="LOC139841454"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcggtgta ttggcccaat tgaagccgag atgatagtgg atgaagtgca caatggttct
       61 tgcgcattgt attcaggcta taaaaccatt gcggccaaaa ttatgcgaat gggttacttt
      121 tggccatcat tatatcgcga tgttgcaaag attgttaagt gttgcaagag ttatcaaaga
      181 catgcgccgc agaataggat gccaaggcat gatatgatcc ctgttaactc gccattgcca
      241 tttcacaatt gggctattga tattgtagga ccatttcccg caggtcctgg caatgtcaaa
      301 ttcctaattg tggcaattga ctattttcaa aaatgggttg aggctaaggc ggttcgcact
      361 atcactagag tgcaagtgcg taattttgtt tgggaatata ttgttttggc acatccacag
      421 gctaatggct tgtgtgaagt gactaaccgc gacattgtga gcggtattaa aaggcggtta
      481 tatgaaaagc gatctggttg ggtagacgag ctacccaatg tattatgggc gcatcacact
      541 actttcaaga agagcacagg tgaaacacca ttcagtttaa tatatggctc caaagcagct
      601 atactcgctg aaattctcgt gccaacgcat agagttgcta actttgatga agaagaaaat
      661 ggtgaagctt tatgcgaaaa cttgaattta atagaagagc gaagattaag ctgctatcaa
      721 ggaggtgaat gggtactgcg aaacaatgat gcgagtcgag cagaaaaact tggtaaatcg
      781 ggacctaact gggagggtcc ttatcaagtt gttgcaatta gcgcgacagg atcatataaa
      841 ctcgcagaca ttgaagggcg aaatctccct aatgcgtggc atgctgcttt gttaaagcga
      901 tattatgcat aa
//
LOCUS       XM_071831671             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841455), mRNA.
ACCESSION   XM_071831671
VERSION     XM_071831671.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139841455"
                     /note="uncharacterized LOC139841455; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841455"
     CDS             1..903
                     /gene="LOC139841455"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687772.1"
                     /db_xref="GeneID:139841455"
                     /translation="MYFFGKALAGSEINYVPIEKFVYALILTSRRLRRYFQGYLVHVL
                     TNMPVKQVLTKPEISGRLALWAVELGAYEISYFPRNAIKGQVLADYLVEMSGELEIIN
                     KRTELKPVQSETWDLFTDGASCAEGAGAGLVLTSPIGEEHTYALRFNFDVTNNEAEYE
                     ALLAGLNIVHKMSVTKLRTFTDSQLVANQFSGSFDAHELSMQKYLKLLQESVMRCEHF
                     ELAQIPRSQNKKADALSKLAALTFSHFQKLVWVEELPSKSIDNDLMVASVEEEQPNWM
                     EPILQYIRNNVLPSDKREARLVRE"
     misc_feature    <4..273
                     /gene="LOC139841455"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    343..717
                     /gene="LOC139841455"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(358..369,457..465,472..474,544..546,664..666,
                     706..708)
                     /gene="LOC139841455"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgtattttt tcggcaaagc tcttgcggga agtgaaataa actatgtgcc tattgaaaaa
       61 tttgtgtacg cgcttatatt aacatcgcga aggttgagga gatattttca agggtacctg
      121 gtacatgtgc taactaacat gccagtcaag caagttttaa caaaaccaga aatatctggt
      181 aggctcgcgt tgtgggcagt ggagttaggc gcttacgaaa tctcttactt tccgcgcaat
      241 gctataaaag gccaagtttt ggcggattat cttgtggaaa tgtctggtga gctggagata
      301 attaataagc gaacagagtt aaagccggtg cagagcgaaa cttgggattt gtttactgat
      361 ggagcctcat gtgcagaagg tgccggtgcg ggtttagtgt taacaagccc aattggtgag
      421 gagcacacat acgcgctacg tttcaatttt gatgtaacaa ataatgaagc tgaatatgaa
      481 gcattgcttg cgggtttaaa tatcgtgcat aaaatgagtg tcaccaagtt gcgcactttt
      541 acagattcac agctagtggc aaatcagttt agcggctctt ttgacgcaca tgaactctca
      601 atgcaaaaat atttgaagtt gttgcaagaa tctgttatgc ggtgtgagca ttttgaactt
      661 gcacaaatac caaggagtca aaataagaaa gcggatgcgt taagtaagtt ggccgcttta
      721 acattttcac actttcaaaa gctagtttgg gttgaggaat tgccaagcaa atccatagat
      781 aatgatctaa tggttgcgtc tgttgaagaa gaacaaccaa attggatgga accaattctg
      841 caatatatac gcaataatgt tttgccaagt gataaacgcg aagctcgttt agttcgtgag
      901 tga
//
LOCUS       XM_071831672             951 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein CPR1-like
            (LOC139841456), mRNA.
ACCESSION   XM_071831672
VERSION     XM_071831672.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..951
                     /gene="LOC139841456"
                     /note="F-box protein CPR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841456"
     CDS             1..951
                     /gene="LOC139841456"
                     /codon_start=1
                     /product="F-box protein CPR1-like"
                     /protein_id="XP_071687773.1"
                     /db_xref="GeneID:139841456"
                     /translation="MASEFRTTLPPSIITNILCRLPAKSVGRFRLRHIIFNPTTKEVA
                     GLPESGDEIIDGKSGDEIINIDSIAEGQIVYGFGYDSLTDDYKVVTISDIHRANLVNV
                     DVTMHVHVYSLRANTWKGIIDTPGNHIYTVDAGVFSNGFLHWLEIKENEHLGNIIAFS
                     LSDEKFNEILIPKVDFVYGKNCKLVDLGGKLALFMESKGEVWLMNEYGVNESWTKISL
                     HGFDEMRMFFRPMIFDYDGKIMVVGKKQRFIYDVEGGFSENVEISHNHQLIVLGSYVE
                     SLVSLQSSQGLTEGTLNLSSGASGDPTSLDEFLQIILQMV"
     misc_feature    25..114
                     /gene="LOC139841456"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    100..759
                     /gene="LOC139841456"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggcgtcgg aattccgcac cacgcttcca ccgtcaatta tcaccaacat cttatgtcgt
       61 ctccctgcga aatcggttgg tcgtttcagg cttaggcaca tcatttttaa cccaacaact
      121 aaggaagttg cgggtttacc tgaatcagga gatgagataa tagacggtaa atcaggagat
      181 gagataataa acatagacag tatcgcagaa gggcaaattg tgtatggatt tggttatgat
      241 tcgttaactg atgattacaa ggttgttaca atctctgaca tacatagggc caatttggtc
      301 aatgttgatg tcactatgca cgttcatgtt tatagcctta gagctaatac atggaaagga
      361 attattgata ctcctggtaa tcatatttat acggttgatg caggtgtatt ttcgaacggg
      421 tttcttcatt ggttagaaat aaaggaaaac gagcatttag gaaacattat tgcatttagt
      481 ttgtcggatg agaaatttaa cgaaattttg atacccaaag ttgatttcgt gtatggtaaa
      541 aattgcaaac tcgttgatct tggtggaaag cttgcattat ttatggaatc gaaaggggag
      601 gtttggttga tgaatgagta tggggtcaat gaatcttgga ctaagatttc actccatgga
      661 ttcgatgaaa tgaggatgtt ttttcgacct atgatttttg attacgatgg aaaaattatg
      721 gttgttggca aaaagcaaag gtttatatat gatgttgaag gaggcttctc tgaaaatgtt
      781 gagatttctc ataatcatca gttgattgtt ttgggtagct atgttgaaag ccttgtctcc
      841 ctgcaaagct cacaaggatt aaccgaaggg accttaaacc tgagcagtgg cgcatctggt
      901 gaccccacta gtttggatga gtttttacaa attattcttc aaatggtata g
//
LOCUS       XM_071831673             957 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein CPR1-like
            (LOC139841457), mRNA.
ACCESSION   XM_071831673
VERSION     XM_071831673.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..957
                     /gene="LOC139841457"
                     /note="F-box protein CPR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 46
                     Proteins"
                     /db_xref="GeneID:139841457"
     CDS             1..957
                     /gene="LOC139841457"
                     /codon_start=1
                     /product="F-box protein CPR1-like"
                     /protein_id="XP_071687774.1"
                     /db_xref="GeneID:139841457"
                     /translation="MASECSNTLPPEMITNILCRLPAKLVSHFRCVSKDWLSQLSSHK
                     FIKNHENTLNQKHILLNSLGELSLFSIPIDYQEKIPTNLCFRLWTVHFHGCCNGLVSG
                     SASFCDEDFILKHYICNPTTKEVVGLPESGHEVIDGVSKGQIVCGFDYVSLTDDYKVV
                     MISDEHKDNLSDANVTMCVHVYSLRANTWKGIIDTPGNHTYGVGPGAFINGFLHWLEI
                     NENMYLGNITTFSLSDEKFNKMLLPKVDFVYGRDCKLVGIGGKLGLFLEPKGEVWLMN
                     EYGVNGSWTKILLQGFNTISKDDEAHQMESIQKEACGIKMNG"
     misc_feature    25..135
                     /gene="LOC139841457"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(25..30,34..42,49..54,61..63,94..102,106..108,
                     115..117)
                     /gene="LOC139841457"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(25..27,37..39,46..51,58..63,73..75,79..84,94..102,
                     106..108)
                     /gene="LOC139841457"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    280..864
                     /gene="LOC139841457"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggcgtccg aatgcagcaa tacacttcca cctgagatga tcaccaacat cttatgtcgt
       61 cttcctgcaa aattggttag tcatttcagg tgcgtttcaa aggattggct atctcaactt
      121 tcatcacaca aattcattaa aaaccatgaa aataccctca accaaaaaca catcttactt
      181 aattcccttg gtgagctttc gttattctca atcccaattg attaccaaga aaaaatacca
      241 acaaatcttt gcttcagatt atggaccgtt cattttcatg gttgctgcaa tggccttgtt
      301 tctgggtcag catctttttg tgatgaagat ttcattctta agcactacat ttgtaaccca
      361 acgactaagg aagtagtagg attacctgaa tcaggacatg aggtaataga cggtgtctca
      421 aaagggcaaa ttgtttgtgg atttgattat gtttcgttaa ctgatgatta taaggttgtt
      481 atgatctctg acgaacacaa ggacaatttg agtgatgcta atgttactat gtgtgttcat
      541 gtttatagcc ttagagctaa tacatggaaa ggaataattg atactcccgg taatcatact
      601 tatggagtgg gtccaggcgc atttatcaac gggtttcttc attggttaga aataaacgaa
      661 aacatgtatt taggtaacat tactacattt agtttgtcag atgagaaatt caacaaaatg
      721 ttgttaccca aagttgattt cgtgtatggt agagattgta aactcgttgg tattggtgga
      781 aagcttggtt tatttttgga accaaaaggg gaagtttggt tgatgaatga gtatggagtc
      841 aatggatctt ggactaagat tttactacag ggattcaata caatcagtaa agatgatgaa
      901 gcccaccaaa tggaaagtat acaaaaagag gcatgtggga tcaagatgaa cggttga
//
LOCUS       XM_071831674            1191 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polygalacturonase-like
            (LOC139841458), mRNA.
ACCESSION   XM_071831674
VERSION     XM_071831674.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1191
                     /gene="LOC139841458"
                     /note="polygalacturonase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 43
                     Proteins"
                     /db_xref="GeneID:139841458"
     CDS             1..1191
                     /gene="LOC139841458"
                     /codon_start=1
                     /product="polygalacturonase-like"
                     /protein_id="XP_071687775.1"
                     /db_xref="GeneID:139841458"
                     /translation="MAFRVSHFILITFTIIFAIVVGATTASKAPKLVNIINIAKFGAK
                     PDGRTDTTRALQSAWASACSSNKPATIYVPTGRFFLQSAYFNGEHCNNKAINIVIDGT
                     LLAPDYRSTRNTGWIRFEKVTGVSISGGVLDGRGNDLWACKATSGGCPTGATTLEFYG
                     SRDIVITRLTSINSQKFHTVIDGCQNVKLQGITISAPGNSPNTDGVHIEHSSGVAVLN
                     SQISTGDDCVSIGPGSSNLWIENINCGPGHGVSIGSLGWSLQEPGVQNVTVKSSTFRS
                     TENGVRIKTWARESNGFVRGVVYKDLTMVNVQNPVIIDQHYCPGERNCPNQVAGVRIS
                     DIRYENIHGTSANVVGLKLDCSKEHPCSGIEIEDVNLSYGNGRAHATCVNALGSVASL
                     SCLI"
     misc_feature    31..1185
                     /gene="LOC139841458"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 atggcattta gggtttctca cttcattctc ataacattca ctataatctt cgcaattgtt
       61 gtaggtgcca caacagcatc aaaagctcct aaacttgtta atatcataaa tatcgcaaaa
      121 tttggagcaa aacccgatgg taggacggat acaacccgag cattacaatc tgcatgggct
      181 tctgcatgtt cttctaataa accggctaca atctatgtcc caaccggtag gttttttcta
      241 caatctgctt acttcaatgg cgaacattgt aacaataagg cgattaacat tgttatcgat
      301 ggtacgcttc ttgcacctga ttatcggagc acacgtaata ctgggtggat taggtttgag
      361 aaggtgaccg gagtttctat ctccggcggg gttttagatg gacgaggcaa cgatttgtgg
      421 gcttgtaaag ccacttccgg cggttgtcca accggtgcaa ccacattaga gttctatggt
      481 tcaagagaca ttgtaattac aagactgacc tcaataaaca gccaaaagtt ccacactgtg
      541 atagatggtt gccaaaatgt taaacttcaa ggtatcacca tatctgcacc aggaaacagt
      601 cccaacactg acggcgtaca catcgaacac tcttctggcg ttgccgttct caactctcag
      661 atttcaaccg gagacgattg tgtatccatt ggaccgggtt catctaacct ctggattgaa
      721 aacattaatt gtgggcccgg ccacggtgtt agcattggga gtttaggttg gagcttgcag
      781 gagcccggtg tacaaaacgt gacagtcaaa agttcgacat ttagatcaac cgaaaatgga
      841 gtaaggatca agacatgggc tagggaaagc aatgggttcg ttagaggggt ggtgtacaaa
      901 gatctaacaa tggtgaatgt tcaaaatccg gtgataatcg atcaacacta ttgtccaggc
      961 gaaagaaatt gcccgaatca agtagcagga gtgaggatat cggacattcg atatgaaaat
     1021 attcatggaa cctcggcaaa tgtggtggga ctgaaacttg attgcagtaa ggagcatccg
     1081 tgtagtggga tcgaaattga agatgtgaat ttgagttacg gaaatggacg tgctcatgca
     1141 acttgtgtta atgctcttgg aagtgtggct tctttgtcat gtttgatctg a
//
LOCUS       XM_071831675             867 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841459), mRNA.
ACCESSION   XM_071831675
VERSION     XM_071831675.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..867
                     /gene="LOC139841459"
                     /note="uncharacterized LOC139841459; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841459"
     CDS             1..867
                     /gene="LOC139841459"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687776.1"
                     /db_xref="GeneID:139841459"
                     /translation="MPKEILLQERVARSFPDPQPLAENSRRDKFKFCIFHDDYGHDTN
                     RCRDLAELIAEAFEQGKLDHLIAQGAASTANTIILPAESNAPQVPNAADRKAPAVKNL
                     GVNMVSKKENLRKIQVINVVEVQGKMSVFQVYEQFANWQCPSITFPPINLSTNHDKPV
                     VVSCRIANTGIIILKVHVDTGSSVDVMYEQCFNKLPAHIKALLKPTTVLLAGFSGEST
                     WPIGQLELQVELVVDRDELLKRFNMIPGRTALRMFGTIPSTLHGMVKISTCKGIGTLT
                     SAVIEPLWAITT"
     misc_feature    484..>690
                     /gene="LOC139841459"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(535..537,541..543,547..549,628..636)
                     /gene="LOC139841459"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    535..543
                     /gene="LOC139841459"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    535..537
                     /gene="LOC139841459"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(628..639,649..660)
                     /gene="LOC139841459"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgcctaaag aaattctttt gcaagaaaga gtagcaagat ctttccctga tcctcaacct
       61 ttagcagaaa atagcagacg tgataaattc aagttttgca ttttccatga tgactatggt
      121 catgatacta accgctgtag ggatttggca gagttaattg cggaggcatt tgagcaaggt
      181 aaattggacc atttaatagc tcaaggtgct gcaagtactg caaatacgat tatcttgccc
      241 gcagagtcta atgctccgca agtgccaaat gccgctgatc gaaaagctcc cgcagtgaag
      301 aatctagggg ttaatatggt gagcaagaaa gagaatttgc gcaaaattca agttattaat
      361 gtagtagagg ttcaaggcaa aatgtcagtg ttccaagtat atgaacaatt cgcgaactgg
      421 caatgtccct ctattacttt ccctcctata aacttgagca cgaatcatga taaaccagtg
      481 gtggtttcat gccgcattgc gaacactggc attataattc tgaaggtaca tgttgatact
      541 ggtagcagtg tggatgtaat gtatgagcaa tgtttcaaca agttgcctgc acatattaaa
      601 gctttgttaa aacctactac ggttttgcta gctggttttt caggagaatc aacttggcct
      661 attggtcagt tggaattgca agttgaatta gtagttgacc gcgatgaatt gctaaagcgg
      721 tttaacatga ttcctggccg cactgctttg cgcatgtttg gcacaatacc atctacgttg
      781 cacggaatgg tgaaaatttc tacttgcaag ggcattggta cgctgacttc ggcagtaatt
      841 gaaccacttt gggcgattac tacgtga
//
LOCUS       XM_071831676            3504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841460), mRNA.
ACCESSION   XM_071831676
VERSION     XM_071831676.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3504
                     /gene="LOC139841460"
                     /note="uncharacterized LOC139841460; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841460"
     CDS             1..3504
                     /gene="LOC139841460"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687777.1"
                     /db_xref="GeneID:139841460"
                     /translation="MSEDNSHTRNSEISELTSQLAKLIQANVESQAHRLPDSLKINLS
                     LNNTNFSLWSRMMKVAIGGKSDALLKHLTDDPPEVTSNKWNQEDLVVFSWIIQKIEPQ
                     IASNLTQFPITKTLWNALVTTYSVGKDKLQTFDLHVRANNIKQEGKPLEELWLKMQGI
                     WGEIEMRDPNPMEHPSDIVKYNNLRSEQKLFQFLNALDQKHDNIKREILRLDPLPTVE
                     SAYAAIHKETAHQTIFGTKTEAPTHSGIATGLVASKTKEHDGHGLISKKQSRSDYSQL
                     SRDKDKLECGKCGMKRHTKEQCFKVIGYPEWWNDGHTKGKASMVTVAVATGGNLEANN
                     SGASATGSFGLLAAEQLGGGNLGCLSDQKMGVSVSYTNVVSNKTKNNEWIIDSGATDT
                     MTFDETDIYLQSKPNKYKIKTDIRTGEIIGRGTERDGLYYVDEVTHDGTTMLAHGTIN
                     RQAWLWHRRLGHPSAGYLSILFPSLFSHNKTFECETCILAKSHQNSFKPSNTKTERPF
                     SLVHSDVWGPARGEIEPNHTVSWLDIPSSEKVTHATEPQSTPSFSTNDLPHEEVSTES
                     LETNTTNRENEDVSVQESATESEEHVEQPTEQTQQQYNLPPIVNRGIPPKRFSPEREP
                     RRSRYPMADIAKGNLSTEAKQFTSALYSEEIPTSVEQALKSTNWRKAMEEEIKALQTN
                     NTWEKCTLPESKKPVGCRWVFTIKHKSDGTIERYKARLVAKWYTQTYGVNYSETFSPV
                     AKIDTIRVLFSVAANKDLPLHQFDVKNAFLHGELKEEVYMEGPPGFSSNFKAREVCRL
                     KKSLYRLKQSPRAWFGRFTLAMKNYGFKQSNSDHTLFLKQRNNLITCLIIYVENMIIT
                     GNDQEEIANLKLNLFKEFEMKDLGRLKYFLEIKVLRSQQGIFICQNKYILAETGLVDC
                     KPAESPMIPNKRLYIEEKGNPADQSQYQRIVEKLIYLTHTRPDIAHVVGVVSQFMHQP
                     QKHHMDAVWRIIKYLKGTVGDGVLFKRNHHLETQIFTDAGYRGEKGDRKSTAGYFALV
                     GGNLVTWRSKKQKVVALSSAEAEYRGIDRGVTEALWIKKLLTEIGFPPQNPIKIMCDN
                     EAAIAILENPVQHDRTKHIEIDRYFIKEKLEAEIISLPFVRSEDQLADILTKSVNGIS
                     FHELLVKLNNGNPTIQRAGEC"
     misc_feature    1285..1476
                     /gene="LOC139841460"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    2044..2766
                     /gene="LOC139841460"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    3016..3435
                     /gene="LOC139841460"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(3028..3039,3142..3150,3157..3159,3259..3261,
                     3337..3339,3418..3420)
                     /gene="LOC139841460"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtcagaag acaacagcca tactcgtaac agtgaaatca gtgaattaac tagccaattg
       61 gcaaagttaa ttcaagcaaa cgtggaatca caagcacaca ggcttccaga ttccttgaaa
      121 atcaatttaa gcctcaataa cacaaacttt tctttatggt caaggatgat gaaggttgca
      181 atcggaggca aatccgatgc cctccttaag catctgaccg atgatccacc agaagtcaca
      241 agcaacaaat ggaaccaaga agacctggtt gtgttctctt ggattatcca gaagatagag
      301 ccacaaattg caagcaacct gacccaattc ccaattacaa aaacgctatg gaatgcactc
      361 gtcacaacat acagtgtagg caaagacaag ctgcaaacct ttgatctgca cgttagagca
      421 aacaacatca aacaagaagg taaacctttg gaagaattat ggttaaaaat gcaagggatt
      481 tggggtgaaa tcgaaatgag ggatccaaat cccatggaac accctagtga tattgtcaaa
      541 tacaacaacc ttagatcaga acaaaaattg ttccaatttt taaatgcttt agaccagaaa
      601 catgacaata tcaaaaggga aattctgaga ttagatccct taccaaccgt tgaaagtgca
      661 tatgctgcaa ttcataaaga aactgcacat caaactatct ttggtactaa gaccgaagct
      721 cctacccact ccggcatcgc gaccggcctt gtagcatcaa aaacaaaaga acacgatggc
      781 catggtctca tctcaaagaa acaaagccga tcagattact cacagttatc tcgagacaaa
      841 gataaacttg agtgcggtaa gtgtggaatg aaaagacaca caaaagaaca atgctttaag
      901 gtaatcggat acccggagtg gtggaacgac ggtcatacga agggtaaagc ttcgatggtg
      961 acggtagctg tagcaaccgg aggtaacctt gaggctaaca actccggtgc atctgcaaca
     1021 ggcagttttg gattacttgc ggcggaacaa ctaggtggag gtaatttagg gtgtttatcg
     1081 gaccaaaaaa tgggtgtaag tgtttcgtac actaacgttg tttcaaataa aacaaaaaat
     1141 aacgagtgga ttattgatag tggtgcaacg gataccatga cattcgatga aaccgacatt
     1201 tatttacaat caaaacccaa caaatataaa attaaaacgg atatcagaac gggggagata
     1261 attggtcgtg gtactgaacg agatggattg tactatgtgg atgaagtcac tcatgatggt
     1321 actactatgc tagctcatgg aaccattaat aggcaagcat ggttatggca tagacgtctt
     1381 ggtcacccgt ctgctggtta cttaagcatt ttatttccta gtttattttc acataataaa
     1441 acttttgagt gtgaaacttg tatcttggct aaaagccatc aaaactcttt taaaccaagt
     1501 aatacaaaaa ctgaacggcc gttttcctta gttcactctg atgtatgggg gcccgcaagg
     1561 ggggagattg aacctaacca cactgtgagt tggctagata taccatcatc agaaaaagtg
     1621 actcatgcca ccgaaccaca aagtactcca tctttcagta ctaacgatct tccccatgaa
     1681 gaggtaagca cggaatctct tgaaactaat actactaacc gtgaaaatga agatgtgtca
     1741 gtacaggaaa gtgccacaga atccgaagaa catgttgaac agccaacaga acaaactcaa
     1801 caacaataca atcttcctcc gatagttaac cgaggaatcc caccaaaaag gttctcccct
     1861 gaaagggagc cccgcagatc aagatatcct atggcagaca ttgccaaagg aaatttatca
     1921 acagaagcta aacagtttac ttccgcatta tactctgaag aaattccaac ctcggtagag
     1981 caggctctga aatctaccaa ctggagaaaa gcgatggagg aagagataaa agcccttcaa
     2041 acaaacaata catgggaaaa atgcaccctt ccagagtcaa agaaaccagt tggatgtcga
     2101 tgggtattca caatcaaaca caaatcagac ggtactattg agagatacaa agctcgattg
     2161 gtggccaaat ggtacactca aacctatggt gttaactact ctgagacttt ttcaccagta
     2221 gccaaaatcg acaccatcag ggtactcttt tcagttgctg caaataaaga tttgccactt
     2281 catcagttcg acgttaaaaa cgcttttctt cacggagaac tcaaagaaga agtttacatg
     2341 gaaggacctc ccggtttctc atcaaacttc aaagcaaggg aagtttgtcg tcttaaaaaa
     2401 tctctttata ggttaaaaca atcccctcgg gcgtggtttg ggcgttttac tttagcaatg
     2461 aaaaattatg gctttaaaca aagtaactcc gatcacacgt tatttttaaa acaaagaaac
     2521 aatttaatta catgtcttat tatatatgta gaaaatatga tcattacagg gaatgatcaa
     2581 gaagaaattg caaacctaaa attaaatttg tttaaagaat ttgaaatgaa agacctaggg
     2641 agactcaaat attttttgga gattaaagtc ttacgatccc aacagggaat ctttatttgt
     2701 caaaataaat acatccttgc tgaaacagga ttggtcgatt gcaaaccagc tgaaagtcct
     2761 atgatcccga ataaaaggct ttacatagag gaaaaaggca atccagctga tcaaagccag
     2821 tatcaaagaa tcgtagaaaa actcatatat ctcactcaca ctcgtccaga tatagcacat
     2881 gttgtagggg ttgtcagtca gttcatgcac caacctcaaa aacatcatat ggacgcagta
     2941 tggagaatta tcaaatatct aaaaggaacc gttggggatg gagttttgtt caaaaggaat
     3001 catcacttgg aaactcaaat atttaccgat gcaggttata gaggagagaa aggagatagg
     3061 aaatctactg cagggtactt tgccctagta ggaggaaatt tagtcacctg gagaagtaaa
     3121 aaacaaaagg tagttgccct ctctagtgct gaagcagaat ataggggaat tgatagaggc
     3181 gtaactgagg cattatggat caagaaactt ctaacagaaa ttggttttcc tccccaaaat
     3241 cccatcaaga tcatgtgtga caatgaagct gcaatcgcaa ttttagaaaa tccagtccag
     3301 catgaccgaa ccaaacacat tgaaatagat cggtacttca tcaaagaaaa actcgaagca
     3361 gaaataatct cccttccatt cgtcagatcc gaagatcaac tcgcagatat cctaacaaaa
     3421 tcagtcaacg gaatatcgtt tcacgaatta ctcgtcaagt tgaacaatgg gaatcccact
     3481 attcaacgtg cgggggagtg ttag
//
LOCUS       XM_071831677            1170 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polygalacturonase-like
            (LOC139841461), mRNA.
ACCESSION   XM_071831677
VERSION     XM_071831677.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1170
                     /gene="LOC139841461"
                     /note="polygalacturonase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841461"
     CDS             1..1170
                     /gene="LOC139841461"
                     /codon_start=1
                     /product="polygalacturonase-like"
                     /protein_id="XP_071687778.1"
                     /db_xref="GeneID:139841461"
                     /translation="MDNHILKGAFICFTLSLLIVSCHGASYNVVSFGARADGRTDSSQ
                     AFTRAWRAACASTTSTMVYIPRGTYMTKPVVFSGPCRSRILFQIDGTIVAPPNYQDTG
                     NTGFWILFTKVSRLTIHGGILDARGSKFWACRRSGSNCPAGVRSLSILWSSHVVISGL
                     KSLYSELIHITVSDSSNVLLEHMNIIAPSRSPNTDGIIIQASTGVTIKNSMIRTGDDC
                     IAIGPGSKNVWIEKIACGPGHGISIGSLGNSLNEAGVQNVTVTNAVFTKTQNGVRIKS
                     WARDSKSYATNVEFRNIVMRSVDNPIIIDQTYCPSNRCPRQTSGVEVSNVKYSNIKGS
                     STTVEAVKFQCSVSNPCRGIQMRNIRLTTPNRATTSICQNAHGSSKGSVVPRSCF"
     misc_feature    31..1167
                     /gene="LOC139841461"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 atggataacc acattttaaa gggtgctttc atttgcttca cattatcatt attgatagtt
       61 tcctgccatg gagcttctta caatgtggtt agttttgggg ctagagccga tggcagaacc
      121 gactcgagtc aagccttcac aagggcatgg agggcggctt gcgcttcaac gacttcaacc
      181 atggtttaca ttcctagggg cacttacatg actaaaccgg tcgtgtttag tggcccatgc
      241 aggagtagga tcttgtttca gattgatggt actattgttg cacctcctaa ttatcaggac
      301 acgggtaaca ctgggttttg gatattgttt accaaggttt cgaggttaac cattcatggt
      361 ggaattcttg atgcacgagg ttctaagttt tgggcttgtc gacgatccgg cagtaactgc
      421 ccggctggag taaggtctct atcgatcttg tggtcgagcc atgtggtgat tagtggactc
      481 aagtcattgt atagtgaatt gattcacata actgtgagcg acagtagtaa cgtactttta
      541 gagcatatga acattattgc tcctagtaga agcccgaaca cagatggtat catcatacaa
      601 gcatcaaccg gtgttactat caagaacagt atgattagga caggggacga ttgcattgca
      661 attggtcctg gctctaagaa cgtatggatc gaaaaaattg cttgtggccc aggccatggt
      721 ataagcatag gtagtttggg gaacagttta aatgaagcag gggtgcaaaa tgtaactgtg
      781 acaaatgctg tttttacaaa aacacaaaat ggggtgcgaa tcaagtcttg ggcacgagat
      841 agcaaaagct atgcgacgaa tgtggagttt aggaacattg taatgcggtc ggttgataat
      901 ccgattatca ttgatcagac ttactgccca agtaatcgat gtccacgtca gacttctgga
      961 gtcgaagtaa gcaatgtgaa atatagcaac ataaaaggat catcaacgac agttgaagcc
     1021 gtgaagtttc aatgcagcgt aagcaatccg tgcagaggga ttcagatgcg taacattaga
     1081 ctaaccacac ctaatcgagc aaccacttca atctgccaaa acgcacatgg ttcatctaag
     1141 ggttcggttg ttcctcgaag ctgtttctga
//
LOCUS       XM_071831678            1197 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polygalacturonase-like
            (LOC139841462), mRNA.
ACCESSION   XM_071831678
VERSION     XM_071831678.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1197
                     /gene="LOC139841462"
                     /note="polygalacturonase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139841462"
     CDS             1..1173
                     /gene="LOC139841462"
                     /codon_start=1
                     /product="polygalacturonase-like"
                     /protein_id="XP_071687779.1"
                     /db_xref="GeneID:139841462"
                     /translation="MDKYFLKASYISFLFSFFQFSCNAGSYNVVRFGAKSDGWTDSSQ
                     AFTKAWTAACSSWSTSSTVYIPKGTYMTKPVVFSGPCRSRILFRMDGKLVGPPNYQDM
                     GNSGFWILFTKVSRLSVHGGTIDARGSKFWACRRSGSHCPPGVRSITFMWSNDVVVSG
                     LTSFYSQLIHVAVSRCNNIVFKQMSIIAPSRSPNTDGFIIQSSTGVTIENSVIKTGDD
                     CIAVGPGSKNVWIEKIACGPGHGISIGSLGNSLNEAGVENVTVSNTVFTKTQNGVRIK
                     SWARDSNSYAKNVEFRDIIMKAVDNPIIIDQTYCPSNRCPRETSGVEVSNVRYKNIKG
                     TSITVEAVKFECSISNPCRGIRMHNIKLKTPNRATISTCENVHGSSSGLAIPRSCL"
     misc_feature    79..1170
                     /gene="LOC139841462"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 atggacaaat actttctaaa agcttcttac atttcttttc tattttcatt ctttcaattt
       61 tcttgtaatg caggttctta caatgtggtt agattcgggg ctaaatcaga tggttggacg
      121 gactcgagcc aagcctttac aaaggcatgg acggctgcat gttcgtcatg gagtacttcc
      181 tccacggttt acatccctaa ggggacatac atgactaaac cggtcgtgtt tagtggacca
      241 tgcaggagta ggatcctgtt tcggatggat ggaaaacttg ttggaccacc aaattatcaa
      301 gacatgggta actctgggtt ctggatattg ttcactaagg tgtcgagatt aagtgttcat
      361 ggtggaacca ttgatgctcg gggttccaag ttttgggctt gtagaaggtc tggtagtcat
      421 tgtccacctg gagttagatc gataacattt atgtggtcaa atgatgtggt ggttagcgga
      481 ctcacgtcgt tttacagcca actgatccat gttgccgtga gccggtgcaa caatattgtt
      541 ttcaaacaaa tgagcattat agctccaagc cgcagcccaa atacagatgg tttcattatt
      601 caatcgtcta caggtgttac catagaaaat agtgtaatta agacagggga cgactgcatt
      661 gcagtcggtc ctggctccaa gaatgtttgg atcgaaaaaa tcgcttgtgg acctggccac
      721 ggtataagca taggtagtct ggggaacagt ttaaacgaag caggggttga aaatgtgacg
      781 gtatcaaaca ctgtgttcac caaaacacaa aatggggtgc ggattaagtc gtgggcacga
      841 gatagcaata gctatgcaaa aaatgtggag tttagggaca tcataatgaa ggccgttgat
      901 aatccaatta tcattgatca aacttattgc ccaagtaacc ggtgcccccg tgagacgtca
      961 ggagtcgaag tgagcaacgt aagatataaa aacattaaag ggacatcgat tacagtcgaa
     1021 gcagtgaagt ttgaatgcag cataagcaac ccgtgcagag gtattcggat gcacaacatt
     1081 aaactaaaaa ctccaaatcg agctacgatt tcaacctgtg aaaatgtaca tggttcgtct
     1141 tcaggattag ccattcccag aagttgtctt taattgttcg tacttccttt tgatttc
//
LOCUS       XM_071831679            2343 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841463), mRNA.
ACCESSION   XM_071831679
VERSION     XM_071831679.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2343
                     /gene="LOC139841463"
                     /note="uncharacterized LOC139841463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841463"
     CDS             1..2343
                     /gene="LOC139841463"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687780.1"
                     /db_xref="GeneID:139841463"
                     /translation="MSRLDRVLVSSNVLDVFFDLQLATLPKGFLDHLPLFCHTNKVDF
                     GPTPFKCFNSWYGYPDFDPLVRNALIEADTGHLNMYHDRMKLVKLKKKDWVKTKRTLD
                     RERKQVVMTRINEVEVNIENNQATEDERSERINLLQELLNLQKIEDSDVVQKSRVKWD
                     AEDPGFHPSITLNAEDNSALERSVTEDEVRDVVWECGSNKAPGPDGFSFLFIKRYWAD
                     LKDNLVSTVVSAFSDCSMPKGVGSAFITLIRKVHNPSGIKDFKPISLIGVVYKIIAKI
                     LASRLVKVIDKIISKEQTAFIRGRQILDGPLILNETIDWYKKCKKKLMIMKIDFEKAY
                     DTVSWDFLQYMLRVLRFGDVRRSWIRMCLHSARTSILINGSPTNEFEVRRGLRQGDPL
                     NPFLFLIVMEGLHLCLKDKIESGSIRGATVSNSPIHLSHLLYADDAIFIADWNRESVI
                     NFDKSLLYGFGVEDTILEDFANQVGCVKGSLPFTYLGVPMGCNMLRSEFFWGQSNGSN
                     KMHWVRWDQVLNSLDNGGFQIGSLRSFNHALLLKWVWWFVTKSENMWAMVIRAIHGHN
                     GGLDDSSMRGSSTWCNIMRLFAKLKNDGILPDNVLRIKRGDGFLKSKFCRLCLLDSNI
                     DCSIADRVGPEGWKWHWIRDAIGPRNSAHLRNLESELGSTSLSSSEDLLVWDVSDDGH
                     FVAVDLWTRIKSWVDVIWPDIIAWSEWVAWFDSWHVSSSKKCKLYVIVATSLWHICRH
                     RNGIIFASPFMKKACLFDSIRSYAYNCRCMLVGGPSLAAR"
     misc_feature    727..1470
                     /gene="LOC139841463"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(985..1002,1162..1167,1300..1302,1306..1311,
                     1456..1461)
                     /gene="LOC139841463"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(985..1002,1162..1164,1306..1308)
                     /gene="LOC139841463"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1165..1167
                     /gene="LOC139841463"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgagccggt tggatagggt tcttgtttcc tctaatgttt tggatgtgtt ttttgatttg
       61 cagcttgcaa ctcttcctaa gggattcttg gatcatttac cgttattttg tcataccaac
      121 aaggtagatt tcggacctac gccatttaag tgttttaatt catggtatgg ctacccagat
      181 tttgatcctc ttgtgaggaa tgcgttgata gaggctgata cagggcactt gaacatgtat
      241 catgatcgta tgaaattggt taagttgaaa aaaaaagatt gggttaaaac caaacgaacc
      301 cttgatcgcg aaagaaagca ggtagttatg actagaataa acgaagttga agtaaatatt
      361 gaaaacaatc aggctactga ggatgaaagg agtgagcgaa tcaatttgtt acaggagctt
      421 ttgaacttgc aaaaaattga agattctgat gtggttcaaa agtcgcgggt caagtgggat
      481 gccgaagacc ccggctttca cccgagcatt actttgaatg ccgaggataa ttcagctctt
      541 gaacgaagtg taaccgagga cgaggtgaga gatgtggtgt gggaatgcgg tagtaataag
      601 gctccaggac cggatgggtt ttcatttttg tttatcaaac gatattgggc cgatcttaaa
      661 gacaacctag taagtaccgt tgttagtgca ttctcggatt gtagtatgcc taaaggtgtt
      721 gggtccgctt ttatcacgtt aatccgtaag gtgcataatc cttcggggat taaagatttt
      781 aaaccgattt ctcttattgg tgtggtttat aaaattatag ctaagatcct tgcttctcgt
      841 cttgttaagg taattgataa aattatatct aaagaacaga ccgcgtttat tcgtggaaga
      901 caaattttgg atggcccact aattttaaat gaaacgattg attggtataa aaagtgtaaa
      961 aagaagttga tgattatgaa gattgatttt gagaaggctt atgatacggt tagttgggat
     1021 tttttgcagt acatgttacg agttctcaga tttggtgatg tgcggaggtc gtggattagg
     1081 atgtgccttc attcagccag aacttctatc ttgatcaatg gtagccctac caatgaattt
     1141 gaggttagga gagggcttcg acaaggcgat cctttaaatc cttttctgtt tctcatcgta
     1201 atggaaggtc tccacttgtg tttaaaagac aagattgaat cgggttctat tcgcggagca
     1261 actgtcagta actctcctat ccatttatct catcttttgt atgcagatga tgcgattttt
     1321 attgcagatt ggaacaggga aagtgtcatt aatttcgata agtctctttt gtatggattc
     1381 ggtgtggagg atactattct ggaagatttt gctaaccaag ttggctgtgt caaggggagt
     1441 cttccgttta cttatttagg agtgccgatg ggatgcaata tgcttcgaag cgaatttttt
     1501 tggggtcaat caaacggctc taataagatg cattgggtta gatgggacca agtgttgaat
     1561 tctttagata acggaggttt tcaaattggt agcttacgct cttttaatca tgccttatta
     1621 ttgaaatggg tttggtggtt tgtcacaaaa tcggaaaaca tgtgggctat ggttattcgt
     1681 gcgattcatg gtcataatgg tggtctagat gattcttcga tgcgaggatc aagtacatgg
     1741 tgcaatatta tgcggttgtt tgcgaaactc aaaaatgatg gcatccttcc tgataatgtg
     1801 ttaaggatta aaagaggtga tgggtttttg aaatcgaaat tttgtagact ttgtcttttg
     1861 gattctaata ttgattgttc cattgcggat cgagttgggc ctgaagggtg gaagtggcac
     1921 tggatccgtg atgctattgg tccgagaaac agtgcgcatc tacgtaatct ggaatctgaa
     1981 cttggttcca ccagtttgtc gagcagcgag gatttgttgg tgtgggatgt ttcggatgat
     2041 ggtcactttg tggcagttga tttatggaca agaatcaaat cgtgggtaga tgtaatatgg
     2101 ccggatatta tcgcttggtc cgaatgggta gcgtggtttg atagttggca tgtttcatct
     2161 tcaaagaaat gtaagttgta tgtgatcgtc gcaacctctt tatggcacat atgtagacat
     2221 aggaacggca ttattttcgc ttctccgttt atgaagaagg cgtgtttatt tgattctatt
     2281 cgtagttatg cttataattg ccgttgtatg ttggttggtg gcccttccct agctgctcgc
     2341 tag
//
LOCUS       XM_071831680            1135 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PARTING DANCERS
            homolog (LOC139841464), transcript variant X1, mRNA.
ACCESSION   XM_071831680
VERSION     XM_071831680.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1135
                     /gene="LOC139841464"
                     /note="protein PARTING DANCERS homolog; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841464"
     CDS             230..949
                     /gene="LOC139841464"
                     /codon_start=1
                     /product="protein PARTING DANCERS homolog isoform X1"
                     /protein_id="XP_071687781.1"
                     /db_xref="GeneID:139841464"
                     /translation="MIRPQSDVSLRNLGVGIVCMMSSTWRDEQHPSVINFISRFLSEN
                     SFRLNIVRIAPDFILNCGGLSLAFMFVMSYDCDNPGPIFTRAEKLKTQFEHLYVVVIL
                     PTKEQNDSFLHSKLRYGMAMGRPSFILAMDLETGFEKIVRIAHARGVCKRQDAVSKLK
                     AEKEKSVQDMDVFLKVASSIPHVETHDANALIQTIGSIEAIAKTSKENILENTDISSE
                     KAEIISRFFRDRKFYLGPKIS"
     misc_feature    <617..916
                     /gene="LOC139841464"
                     /note="NAD-dependent DNA ligase [Replication,
                     recombination and repair]; Region: Lig; COG0272"
                     /db_xref="CDD:440042"
ORIGIN      
        1 taaattgaga aagtgtgctc actcactgat caatatcatc taatcttttc ctccggaatc
       61 gccattatca aaaccctaat tttccgctat agtgctccta ttaatttctc attacaccac
      121 gcacgcacac ttcataaatc tcatatcaat accttgtcgt attaatcatt gttcaactcc
      181 agaacgagca tttgaattga caaaatttat gcaaatttga gcttccacga tgattcgccc
      241 tcaaagtgac gtttccttac gtaatttagg tgttggcatc gtttgcatga tgagtagcac
      301 atggagagat gaacaacatc catccgttat aaattttata tctcgctttt tgagtgaaaa
      361 ttcctttcgg ctaaacattg tgcggattgc acctgatttc attttaaatt gcggaggttt
      421 atcattggcc ttcatgtttg tgatgagtta cgactgtgac aatccagggc caatatttac
      481 cagagccgaa aaactgaaga ctcaatttga gcatctatat gttgtggtca tccttccaac
      541 aaaggagcag aatgattcct tcttacattc taagttaaga tatggtatgg ctatgggtag
      601 gccaagcttt attttagcaa tggatctaga aacgggcttc gagaagattg ttagaatagc
      661 acatgctcgt ggtgtttgca agaggcagga tgctgtatcc aaattgaaag ctgagaagga
      721 gaagtcggtc caagacatgg atgtatttct taaagtggca tcctctatcc cccatgtgga
      781 gactcatgat gctaatgcgc tgattcaaac cataggatca atcgaagcaa ttgcgaaaac
      841 atcaaaggag aacatcctgg agaacactga catttcatca gaaaaagccg agataatttc
      901 aagatttttc agagatcgca agttctacct cggccccaaa atcagttgat tgacatacgc
      961 atatgttttt caaattaaca agtgtatgta atagttagtt taagcataat acatcaaaga
     1021 tacattcagt aaaacaacca tgagattttt gttaagctgt tttacacaca ctcttcacga
     1081 tatcagttgc tacagccata tggtgcgttt tgtggacttt ttcttaatag attat
//
LOCUS       XM_071831681            1051 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PARTING DANCERS
            homolog (LOC139841464), transcript variant X2, mRNA.
ACCESSION   XM_071831681
VERSION     XM_071831681.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1051
                     /gene="LOC139841464"
                     /note="protein PARTING DANCERS homolog; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139841464"
     CDS             230..865
                     /gene="LOC139841464"
                     /codon_start=1
                     /product="protein PARTING DANCERS homolog isoform X2"
                     /protein_id="XP_071687782.1"
                     /db_xref="GeneID:139841464"
                     /translation="MIRPQSDVSLRNLGVGIVCMMSSTWRDEQHPSVINFISRFLSEN
                     SFRLNIVRIAPDFILNCGGLSLAFMFVMSYDCDNPGPIFTRAEKLKTQFEHLYVVVIL
                     PTKEQNDSFLHSKLRYGMAMGRPSFILAMDLETGFEKIVRIAHARGVCKRQDAVSKLK
                     AELIQTIGSIEAIAKTSKENILENTDISSEKAEIISRFFRDRKFYLGPKIS"
ORIGIN      
        1 taaattgaga aagtgtgctc actcactgat caatatcatc taatcttttc ctccggaatc
       61 gccattatca aaaccctaat tttccgctat agtgctccta ttaatttctc attacaccac
      121 gcacgcacac ttcataaatc tcatatcaat accttgtcgt attaatcatt gttcaactcc
      181 agaacgagca tttgaattga caaaatttat gcaaatttga gcttccacga tgattcgccc
      241 tcaaagtgac gtttccttac gtaatttagg tgttggcatc gtttgcatga tgagtagcac
      301 atggagagat gaacaacatc catccgttat aaattttata tctcgctttt tgagtgaaaa
      361 ttcctttcgg ctaaacattg tgcggattgc acctgatttc attttaaatt gcggaggttt
      421 atcattggcc ttcatgtttg tgatgagtta cgactgtgac aatccagggc caatatttac
      481 cagagccgaa aaactgaaga ctcaatttga gcatctatat gttgtggtca tccttccaac
      541 aaaggagcag aatgattcct tcttacattc taagttaaga tatggtatgg ctatgggtag
      601 gccaagcttt attttagcaa tggatctaga aacgggcttc gagaagattg ttagaatagc
      661 acatgctcgt ggtgtttgca agaggcagga tgctgtatcc aaattgaaag ctgagctgat
      721 tcaaaccata ggatcaatcg aagcaattgc gaaaacatca aaggagaaca tcctggagaa
      781 cactgacatt tcatcagaaa aagccgagat aatttcaaga tttttcagag atcgcaagtt
      841 ctacctcggc cccaaaatca gttgattgac atacgcatat gtttttcaaa ttaacaagtg
      901 tatgtaatag ttagtttaag cataatacat caaagataca ttcagtaaaa caaccatgag
      961 atttttgtta agctgtttta cacacactct tcacgatatc agttgctaca gccatatggt
     1021 gcgttttgtg gactttttct taatagatta t
//
LOCUS       XM_071831682             417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841465), mRNA.
ACCESSION   XM_071831682
VERSION     XM_071831682.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139841465"
                     /note="uncharacterized LOC139841465; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841465"
     CDS             1..417
                     /gene="LOC139841465"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687783.1"
                     /db_xref="GeneID:139841465"
                     /translation="MVEHIFIHCPLAKDLWLRVFRWWNLSRLLYANMGELFQGCLDSN
                     HPEKRSKLWKAIEWVCGYMIWRNRNLTVFQKKKGSGPMALNEVQIKPCDWISRRSRRL
                     NIVWSQWLLNPGVFDDHAYVDSLGPKSMLSIAFRVL"
ORIGIN      
        1 atggtggaac acatcttcat tcattgccca ttagcaaaag atttatggct tcgagttttt
       61 aggtggtgga atttatctcg tctcctgtat gcaaacatgg gtgaactttt tcaaggttgt
      121 ctagattcta accatcccga aaaaagatca aaattgtgga aggctataga atgggtttgc
      181 ggttacatga tttggcggaa tcggaatctc acagtttttc aaaaaaagaa aggtagtgga
      241 ccaatggctc tcaatgaagt tcaaataaag ccgtgcgatt ggatttctag gcgttctcgg
      301 aggctaaata ttgtttggag tcagtggctt ttaaatcccg gagtgttcga tgatcatgct
      361 tatgttgata gtttaggtcc taaaagcatg ctctcgattg cttttagggt gttgtaa
//
LOCUS       XM_071831683            1379 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PMR5-like
            (LOC139841466), mRNA.
ACCESSION   XM_071831683
VERSION     XM_071831683.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1379
                     /gene="LOC139841466"
                     /note="protein PMR5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139841466"
     CDS             107..1270
                     /gene="LOC139841466"
                     /codon_start=1
                     /product="protein PMR5-like"
                     /protein_id="XP_071687784.1"
                     /db_xref="GeneID:139841466"
                     /translation="MAFAPIINHLISIFILNSLLFNFTILTSSVRLVHPKAGITRHRL
                     PIRQSNLTKCALFMGSWVHDESYPVYQASSCPIIDPEFNCQMYGRPDSDYLKYRWKPA
                     NCELPRFNGLEFLRKMKGKTIMFVGDSLGRNQWESLICMTWSAVQRGATKLIRGDPLS
                     TFKFLDYGVDVSFYRAPYLVDIDSVGGRRVLKLESISKNSKAWMSADVLSFNTGHWWT
                     HKGSLQGWDLMESGGSVYEDMDRLVALNTGLKTWAQWVDSQVDLTTTRIFFQSVSPTH
                     YNPSEWSARATNTGKTCYGETSPTSGSAYPGVYPDQMKVIDSVIREMQNPAYILDITT
                     LSAMRKDAHPSIYTGDLSPGQRANPDHSADCSHWCLPGLPDTWNQLFYTALLY"
     misc_feature    230..1267
                     /gene="LOC139841466"
                     /note="powdery mildew resistance 5; Region: PLN02629"
                     /db_xref="CDD:215338"
ORIGIN      
        1 acaaaaagta tccatccatc taccaaaatt ccttcccccc ctttatacct tcttcttcct
       61 tcattccgac ccaaaaagta aaaccaaaca acacccattc tctccaatgg catttgcccc
      121 cattatcaac catcttatat ccatttttat attaaatagt ttattattca atttcactat
      181 attaacttct tcagttagat tagttcatcc caaagctgga attactcgcc ataggctacc
      241 gattcgtcaa tccaatctaa ccaaatgtgc tttgttcatg ggctcatggg ttcatgatga
      301 atcctacccg gtctaccaag cttcttcttg ccccattatt gacccggaat tcaattgtca
      361 aatgtatggt cgacccgact ctgattacct caagtataga tggaaacccg ccaattgtga
      421 actccctagg tttaacgggc tcgaatttct aaggaaaatg aaaggaaaga caattatgtt
      481 tgttggagac tcgctaggac gaaatcaatg ggagtcattg atttgtatga cgtggtccgc
      541 ggtacaacgg ggtgctacaa aactaattag aggagatcct ctatcaactt ttaagttttt
      601 ggattatggg gtggatgtgt cattttatcg agcaccatat ttggttgata ttgattcggt
      661 tggtggccgg agagtgctta aattggagag tatttcaaag aattcaaagg cttggatgag
      721 tgccgatgtg ttgtcgttta acaccggtca ttggtggact cataaaggct cacttcaagg
      781 gtgggacttg atggagtcgg gtgggtcagt ttatgaagac atggatcggc tggttgcatt
      841 gaacacgggc cttaaaacat gggcccaatg ggttgattcg caagttgatc tcactaccac
      901 gcgaatcttc tttcaatccg tttctcctac tcattacaac ccatccgaat ggagtgcccg
      961 agccactaat actggaaaaa cttgttacgg cgagacgagc ccgactagtg ggtctgcgta
     1021 ccctggggtc tacccggacc aaatgaaagt cattgattct gtaataaggg aaatgcaaaa
     1081 tccggcatac atacttgaca tcacgacatt gtcagcaatg agaaaagatg cacacccgtc
     1141 aatttacaca ggtgatttga gcccgggtca acgagctaac ccggaccact cggctgattg
     1201 tagtcattgg tgccttcctg gcttgcctga tacatggaac caactttttt atacagcttt
     1261 attgtattag cattgtgtat tatataatgt gtgtatgtat agatgattta aacaagtgta
     1321 ttatagattt tttgagttgc tttgtataat tatgtaatga tatcattctt agaacttta
//
LOCUS       XM_071831684            3195 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841467), mRNA.
ACCESSION   XM_071831684
VERSION     XM_071831684.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 69% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3195
                     /gene="LOC139841467"
                     /note="uncharacterized LOC139841467; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841467"
     CDS             1..3195
                     /gene="LOC139841467"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687785.1"
                     /db_xref="GeneID:139841467"
                     /translation="MSSLFKELDHLLIPYRDIKSATNNFDDRNIIERLVSEKRGIIVD
                     NEYKDPYISIYKGQLFRFGKRINVIVEIRQYMEEDDFLKLVSVVSRFKHKNIPTFVGF
                     CYKYKRGYLVSECEFFQSLAQILNISSLPIFRLYNLDYVYKNFTCSHRLQICLGAARA
                     LCYIHNQKAKNYYFSSDKILLDTDLEAKVVGFCFIPYYNENFDDYTDPVCKLTDTVTH
                     KTDVYSFGMVLMDVFCKRYPTSWSPFGTYQFYSTQLEDFDDKILKTMHWEALDILRST
                     LDECFNSQYEYLPHILDVVKLLERALWIQQKHENLEIIKIELGDVKLATENFAEKYLI
                     GSGGYGKVYKAELDIYDAFFLEIEGKNQKEILKKHNRSSKFFSGMKGKNEKENPKNGI
                     PRQRQNVAIKRILNDENGHGRQGFLLELEMLRRCNHPNIVSLIGYCDEERELILVYEF
                     ITNGSLDDHLGSIKKETYLNWVHRIKICLDIAHGLDYLHANMSDKERIIHRDIKSANI
                     LLGKNWDAKIGDFGLSKFFRVNQLRSTIVTDKIVGTEVYLDPEYSKTGKLKKESDIYS
                     FGVVLFEMFTGTLAYKKIYTDENNRGLAAVARRRFSEGTLMEIVDSEVMEEAEEHCFG
                     LKIGPNQKSLETFSKIAFQCLAETQDGRPKLFDIIKELEFALKLQEDRNDIFKFSLKD
                     IKLGTKNFSEKNFIRKEGYGMLYRGEVPYNTGLKKVILKVTRSSEEHNFVRELEILFG
                     HKHENIMEIVGYCKDKDEQIIVYENAYNVNTLNSHVNDVSLTWTKRLEICIGIANGLK
                     FLHEGFARQSLVVHRDIKSANIILNEDWTPKISCFDFSLITPKNQKMEYAVKDVVGSA
                     DYFDPVYCDPVYENTGFLTIESDIYSFGVVLCEMLCGTLTCVKKFRESKQYQDFLVDD
                     IVFEGIKEQIEAKSLATFLRIAYQCLHEKREKRPKADEVYMQLKKALDIQVLKDRLVV
                     KKDLYLLKLEEGGNLSDHIVTFRRLVSKLSDINDIMKEEDLALHLLLSLPKSYNRFVD
                     NMLTGSTSLKLKDVLQKLSDNNLTNESSYMGSIH"
     misc_feature    157..900
                     /gene="LOC139841467"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1000..1989
                     /gene="LOC139841467"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1000..1011,1018..1020,1024..1026,1198..1200,
                     1204..1206,1294..1296,1342..1353,1504..1506,1516..1521,
                     1525..1527,1555..1560)
                     /gene="LOC139841467"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2086..2877
                     /gene="LOC139841467"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2086..2097,2104..2106,2110..2112,2140..2142,
                     2146..2148,2239..2241,2287..2298,2440..2442,2452..2457,
                     2461..2463,2491..2493,2500..2502)
                     /gene="LOC139841467"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    <2905..3150
                     /gene="LOC139841467"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcgtctt tattcaaaga acttgatcac ttactaattc cgtatcgtga tatcaaatct
       61 gctaccaaca actttgacga cagaaatatt atcgaaagac ttgtgagtga aaagagaggt
      121 attatagttg ataacgaata taaagatcct tatatttcta tctacaaagg gcaactattt
      181 agatttggta aaagaatcaa tgttattgta gaaataaggc aatatatgga agaagatgat
      241 ttcttgaaat tggtctcggt ggtttcccgt tttaagcata aaaatattcc aacctttgtt
      301 gggttttgtt acaaatacaa acgcggttac ttagttagtg agtgtgaatt cttccaaagt
      361 ctcgcccaaa tccttaatat ctcatctctt cccattttcc gtctctataa tttagactac
      421 gtctacaaaa acttcacatg ttcccataga ttgcaaatat gtttgggtgc tgctcgtgcc
      481 ttgtgttaca tccataatca aaaagccaaa aattattatt ttagcagcga taagattctt
      541 ttagatacag atttagaggc caaagttgtc ggtttttgtt tcatccccta ttacaatgaa
      601 aattttgacg actacactga cccagtgtgt aaattgaccg atactgtgac acataaaact
      661 gatgtgtatt ctttcggtat ggttttgatg gatgtgtttt gtaagcggta cccaacttcc
      721 tggagcccgt ttggtactta tcagttttac agtacccaac tagaggactt cgatgataaa
      781 atactcaaaa cgatgcactg ggaagcattg gacattttga gaagcaccct tgatgaatgc
      841 ttcaatagtc aatatgaata ccttccacat atacttgatg ttgtgaaatt acttgagaga
      901 gctttatgga ttcaacagaa acatgaaaat ctggaaatca tcaagattga acttggggat
      961 gtaaagttag ccacagagaa ttttgctgaa aaatacctta tcgggtctgg tggatatggt
     1021 aaggtgtata aagcagaact tgacatctat gatgctttct ttttggaaat agaagggaag
     1081 aatcaaaaag aaattcttaa gaaacacaac cgttcttcaa agttcttttc gggaatgaaa
     1141 gggaagaatg aaaaggaaaa tcctaagaat ggaattccta ggcaacgcca gaatgtagct
     1201 ataaaacgta tcctaaatga tgaaaatggg catggtagac aagggttctt gctagaactt
     1261 gaaatgcttc gtagatgtaa ccatcccaac atagtgtcac ttataggcta ttgtgatgaa
     1321 gaacgtgagt tgatccttgt atatgagttt attacaaatg gttcccttga tgatcatttg
     1381 ggaagcatta agaaagaaac ttatctaaac tgggttcatc ggattaaaat atgccttgat
     1441 attgcacatg ggttggatta tcttcacgca aacatgagtg acaaagaaag gataatacat
     1501 cgtgatatta aaagtgctaa catattattg ggaaaaaatt gggatgccaa gattggtgac
     1561 tttgggctct ccaaattctt ccgtgtgaat caattgagga gcactatcgt gacagataaa
     1621 attgtaggca cagaagtgta tttggatcct gaatattcaa agacgggtaa attaaaaaag
     1681 gaatcagata tatactcttt tggagttgtg ttattcgaaa tgtttactgg gacattggct
     1741 tataaaaaaa tttacaccga cgaaaacaac aggggacttg cagccgtagc acgaaggcgc
     1801 ttctctgagg gaacactaat ggaaatagta gattcggaag taatggaaga agccgaggaa
     1861 cactgttttg gtctaaagat aggacctaat caaaagtctc ttgaaacatt ttcaaaaatc
     1921 gcatttcaat gtttagcaga aactcaagac ggtcgaccaa aactgtttga catcatcaaa
     1981 gaacttgaat ttgcactgaa gcttcaagaa gaccggaatg acatcttcaa attctcactt
     2041 aaggacataa aattgggcac aaaaaacttt agtgagaaaa atttcattcg aaaagaagga
     2101 tatgggatgt tatacagagg agaagttcca tataatactg gacttaagaa ggtcatttta
     2161 aaggtcacta gatcttctga agaacataat tttgtaaggg agcttgaaat cctattcggg
     2221 cataaacacg agaatattat ggagattgtt ggttattgta aggataagga tgagcaaatt
     2281 atcgtttatg aaaatgcata taacgtaaat actcttaata gccatgtgaa tgatgttagt
     2341 cttacatgga caaaaaggct tgaaatatgc ataggcattg cgaatgggtt aaaatttctt
     2401 catgaaggtt ttgcaagaca aagtttggtt gtacatagag acattaaaag tgctaatatc
     2461 atactaaatg aagattggac tccaaaaatc agttgttttg atttttcctt aataactcct
     2521 aaaaatcaaa agatggaata tgccgttaaa gatgttgttg ggtcggccga ctattttgat
     2581 cccgtgtatt gtgatcccgt ctatgaaaac actggttttt taaccataga atctgatatt
     2641 tattcctttg gtgtggtttt atgtgagatg ttgtgcggaa cacttacatg tgtaaagaag
     2701 tttagagaat ctaagcaata tcaagacttc ttagtggatg atattgtgtt tgagggtatt
     2761 aaggaacaaa ttgaagcgaa gtcgctagct acttttctaa ggattgccta tcaatgcttg
     2821 catgaaaagc gagaaaaaag gccaaaagcg gatgaagtat atatgcaact caaaaaagca
     2881 ttggatatcc aagtgttgaa agatagattg gttgtcaaaa aggatttgta cttgctgaaa
     2941 ctcgaagaag gaggtaatct gagtgaccat attgtcactt ttcgtcggtt ggtttcgaag
     3001 ttgtctgaca taaatgatat aatgaaagaa gaggatctgg ctctacattt gttgttatca
     3061 ttacccaaat cttacaaccg attcgtggac aatatgttga caggatccac cagtttgaaa
     3121 ctaaaagacg tgcttcagaa gttaagcgac aacaatctaa caaatgaaag ctcttatatg
     3181 ggaagcattc attag
//
LOCUS       XM_071831685             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00820-like (LOC139841468), mRNA.
ACCESSION   XM_071831685
VERSION     XM_071831685.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139841468"
                     /note="uncharacterized mitochondrial protein
                     AtMg00820-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841468"
     CDS             1..504
                     /gene="LOC139841468"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00820-like"
                     /protein_id="XP_071687786.1"
                     /db_xref="GeneID:139841468"
                     /translation="MSIPAAASTTPGHPMVTRSKAGIFKPKYRVNLAYLSHTRLHHAL
                     LTTKEPKGFKSAAKDPAWFEAMREEMTALGHNQTWDLVPRPKHANVVGSKWVFRTKYN
                     ANGSVDRLKARLVAQGFTQIPGIDYSATFSPVVKSSTVRIVLSLATLNKWSLHQLDVK
                     NAFLNGN"
     misc_feature    226..>498
                     /gene="LOC139841468"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgtctatac ctgctgctgc ttcgaccact ccaggccatc ccatggtgac ccgttccaag
       61 gctggtattt tcaagcccaa atatcgagtt aatctagctt atttatcgca tactcgcttg
      121 catcatgcgc ttcttaccac taaggaacct aagggattca aatcagctgc taaagatcca
      181 gcttggttcg aagctatgcg tgaagagatg actgcccttg gtcataatca gacttgggat
      241 cttgttcccc gtcccaagca tgctaatgtg gttggttcca aatgggtgtt tcgaactaaa
      301 tataatgcaa atggttctgt tgatcgacta aaagcacgac tcgttgctca aggatttaca
      361 caaatccctg gtattgacta ctcagctact tttagtccgg tggtcaaatc gtctacggtt
      421 cgtatagtgc tttctcttgc cactcttaac aagtggtcgc ttcaccaact cgatgtgaag
      481 aatgcttttt tgaatgggaa ttga
//
LOCUS       XM_071831686            3392 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841469), mRNA.
ACCESSION   XM_071831686
VERSION     XM_071831686.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3392
                     /gene="LOC139841469"
                     /note="uncharacterized LOC139841469; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841469"
     CDS             1..3195
                     /gene="LOC139841469"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687787.1"
                     /db_xref="GeneID:139841469"
                     /translation="MLSLFKEFDYLRIPYHHIECATNDFDQRNVIERFQSEKRGIIAD
                     EVGHYSYISVYRGQLFRFGKKINVIVEEIKYMPEDEFLKVVSMLSRVRHKNIATFVGF
                     CYRKYIASYLVSECEIKASLAKIVDISSPYSYSSDSLESVYKNLTCSQRLKMCLGAAR
                     ALSHIHDQKAVHSYFSSHKILLDRDLEAKVVGFVLIPPSRFPDDKFALYTDPVSKLTK
                     TTTQESDVYSFGVVLIDVFCRQYTRLFGWIYTPQVSRIHHRDIDDRISKKMNSEASII
                     LSETLNQCLNNERVHRPNMADVVAQLEKALYFQMKHENPKIIKIGLEDVKLATENFAA
                     KYLIGSGRYGKVYKAELNIYDAFFLEIEGKNQKEIPKKRNRFSKFFLGIEGKTKKEIS
                     KKCHPVAIKHIINDENGHGRHGFMLEIEMLHRCNHPNIVSLIGYCDEDHELILVYEFI
                     TNGSLDDYLGSILKETYLNWVNRIKICLDIAHGLDYLHANVSDKERIIHRDIKSANIL
                     LGKNWDAKIGDFGLSKFFCANQLRSTIVTDRIVGTEVYLDPEYSRTGKLKKESDIYSF
                     GVVLFEMFSGTLAYKKIYTDENNKGLAVVARRHFSEGTLMEIVDPEVMEEADEHCFGL
                     KIGPNQKSLDVFSKIAFQCLAETQDDRPKLIDVTKELEIALKLQEKRSDIIKFSLEHI
                     KLGTKNFSEKNFIRTEGSGKLYRGEVPYDSGLKTVILKVTRSSEEHNFLRELEILLGY
                     KHENIIDIVGYCKDIYEQIIVYENAYNVNTLDSHVNDVSLTWTKRLEICIGIANGLKF
                     LYKGFARQQSVVHRDIKSANIILNEKWTPKISCFEFSLITPKNQKMEYVINDVAGSPD
                     FSDPVYCDPVYEKTGFLTMESDIYSFGVVLFEMLCGTLACIKDLRESKQFQDFLVDDI
                     VFEGIKEQIEAKSLATFVMIAYQCLHEEREKRPKADEVYMQLKKALDIQVLKDRLVVK
                     KDLYLLKLIEGGNLSDHIVTFNRLVLKLSNNINEIMTNEDLALLLLLSLPKSYNLFVD
                     NMLTGSTSLKLKDVLQKLSDYNVTNESSYMGSIH"
     misc_feature    148..912
                     /gene="LOC139841469"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1012..1986
                     /gene="LOC139841469"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1012..1023,1030..1032,1036..1038,1195..1197,
                     1201..1203,1291..1293,1339..1350,1501..1503,1513..1518,
                     1522..1524,1552..1557)
                     /gene="LOC139841469"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2095..2874
                     /gene="LOC139841469"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    <2902..3150
                     /gene="LOC139841469"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgttgtctt tattcaaaga atttgattac ttacgaatcc cttatcatca tatcgaatgt
       61 gctaccaacg actttgacca aagaaatgtt atcgaaagat ttcagagtga aaagagagga
      121 attatagctg atgaggtagg tcattattca tatatttctg tctacagagg gcaactattt
      181 cggtttggca aaaagattaa tgttattgta gaagaaatta aatatatgcc agaagatgag
      241 ttcttgaaag tggtctcaat gctttcccgt gttaggcata aaaatattgc cacttttgtt
      301 gggttttgtt acagaaagta catagctagt tacttagtta gtgagtgtga aattaaagca
      361 agtcttgcaa aaatcgtaga tatctcatct ccttacagtt acagctcgga tagtttagag
      421 tccgtctata aaaacctgac atgttcacaa agattgaaaa tgtgtttggg tgctgcccgt
      481 gccttgagtc acatccatga tcaaaaggct gtacattctt atttcagcag ccataagatt
      541 cttttagata gagatttgga ggccaaagtt gttggttttg ttttgatccc cccttcacgt
      601 tttccagatg ataaatttgc cttgtacact gacccagtgt ctaaattgac caaaactacg
      661 acacaggaga gtgatgtgta ttctttcggt gtggttttga tagacgtgtt ttgtcggcag
      721 tacacaaggt tatttggctg gatatatact cctcaagttt ctagaatcca ccatagagac
      781 attgatgata gaataagcaa aaaaatgaat tcggaagcat ccattatttt gtcagaaacg
      841 ctaaatcaat gcttgaataa tgaacgtgta caccgcccaa atatggctga tgttgtcgca
      901 caacttgaga aagctttata ttttcaaatg aaacatgaaa atccgaaaat aatcaagatt
      961 ggacttgagg atgtaaagtt agccacggag aattttgctg caaagtacct tattggatct
     1021 ggcagatatg gtaaggtgta taaagcggaa ctcaacattt atgatgcctt ctttttggaa
     1081 atagaaggga agaatcaaaa ggagattcct aagaaacgca accgtttttc caagttcttt
     1141 ttgggaatag aagggaaaac taaaaaggaa atttctaaga aatgccaccc tgtagctata
     1201 aaacatatca taaatgatga aaatgggcat ggtagacacg ggttcatgct agaaattgaa
     1261 atgcttcata gatgtaacca tcccaacata gtgtcactta taggctattg tgatgaagat
     1321 cacgagttga ttcttgtata tgagtttatc acaaatggtt cccttgatga ttatttggga
     1381 agtatactga aagaaactta tctaaactgg gttaatcgga ttaaaatatg ccttgatatt
     1441 gcacatgggt tggattatct tcatgcaaat gtgagtgaca aagaaaggat aatacatcgt
     1501 gatatcaaaa gtgccaacat attattggga aagaattggg atgccaagat aggtgacttt
     1561 gggctctcca aattcttctg tgcaaatcaa ttgaggagca ctatcgtgac agatagaatt
     1621 gtaggaactg aggtgtactt ggatcctgaa tattcaagga cgggtaaatt aaaaaaggaa
     1681 tcagacatat actcttttgg agttgtgtta tttgaaatgt tctccgggac attggcctat
     1741 aaaaaaattt acaccgacga aaataataaa ggacttgcag ttgtagcaag aagacacttc
     1801 tctgagggaa cgctaatgga aatagtagat ccagaagtaa tggaagaagc cgacgaacac
     1861 tgttttggtc taaagatagg acctaaccaa aagtctctgg acgtattttc gaaaatcgca
     1921 tttcaatgtt tagcagaaac tcaagacgat cgtccaaaac ttattgacgt cactaaggaa
     1981 cttgaaattg cattaaagct tcaagaaaag cggagtgaca tcatcaaatt ttcacttgag
     2041 cacataaaat tgggcactaa aaactttagt gagaaaaatt tcattcggac agaaggatct
     2101 gggaagttat accgaggaga agtcccatat gatagtggac ttaagacggt cattttaaag
     2161 gtcactaggt cttccgaaga acataatttt ttaagggagc ttgaaatcct actcgggtat
     2221 aaacacgaga atattatcga cattgttggt tattgtaagg atatctatga acaaattatc
     2281 gtttatgaaa atgcatataa cgtaaatact cttgatagcc atgtgaatga tgttagtctt
     2341 acatggacaa aaagacttga aatatgcata ggcatagcaa atgggttgaa gtttctttat
     2401 aaaggttttg caagacaaca atcggttgta cacagagaca ttaaaagtgc taatatcata
     2461 ctaaatgaaa agtggactcc aaaaatcagt tgttttgagt tttccttaat aactcctaaa
     2521 aatcaaaaga tggaatatgt cattaatgat gttgctgggt cgcccgattt ttctgatccc
     2581 gtgtattgtg atcccgtcta tgagaagact ggttttttaa ccatggaatc tgatatttat
     2641 tcctttggtg tggttttatt tgagatgttg tgcgggacac ttgcatgtat aaaggattta
     2701 agagaatcta agcaatttca agacttcttg gtggatgata ttgtgtttga gggtattaag
     2761 gaacaaattg aagcgaaatc actagctaca tttgtaatga ttgcctatca atgcttgcat
     2821 gaagagcgag aaaaacgacc aaaagcggat gaagtataca tgcaactcaa gaaagcattg
     2881 gatatccaag tgttgaaaga tagattggtt gtcaaaaagg atttgtactt gctgaaactt
     2941 atagaaggag gtaatctgag tgaccatatt gtcaccttta atcggttggt tttgaagttg
     3001 tcaaataata taaatgagat aatgacaaac gaggatttgg ctctactttt gttgttatca
     3061 ttacctaaat cttacaacct atttgtagac aatatgttga ccggatccac cagtttgaaa
     3121 ctaaaagacg tgcttcagaa gttaagcgac tacaatgtaa caaatgaaag ctcttacatg
     3181 ggaagcatcc attagcttga ttgttttaaa tttcaatttc aatatcgatt atttaaacgg
     3241 acatataagt tcatagggat atcttttgat tatgtatact gcttgtaatt agagtcccta
     3301 gcaaatcatt ggtcatgacg tgcttgccta gcttagggct atcgatgatc acctagcgaa
     3361 atttggataa gatttgatac tttttttgtt ac
//
LOCUS       XM_071831687            1759 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein DETOXIFICATION
            31-like (LOC139841470), mRNA.
ACCESSION   XM_071831687
VERSION     XM_071831687.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1759
                     /gene="LOC139841470"
                     /note="protein DETOXIFICATION 31-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139841470"
     CDS             80..1573
                     /gene="LOC139841470"
                     /codon_start=1
                     /product="protein DETOXIFICATION 31-like"
                     /protein_id="XP_071687788.1"
                     /db_xref="GeneID:139841470"
                     /translation="MDSNTDAVPLLTTKTIPKNAHFTGDVEDIPPITGINDFFVQFMI
                     ESKKLWFLAGPLIFTTVCQYSLGAITQTFAGHVGTLDLAAFSIENSVIAGFALGITVG
                     MGSALETLCGQAYGAGQMEMLGIYMQRSWIILFVTGLIMMFLYIFATPLLLLIGQTEP
                     ISHAAGKMALWMIPQLFAYAANYPIAKFLQAQSKIMVMSVISGVALVLHTFFSWLFML
                     KLGWGLWGGAIVLNFSWWFMVVAQMVYILSGTCGQAWSGFSMAAFNNLWSFVKLSFAS
                     AIMLCVETWYFMALVLFAGYLKNAEIAVDALSICTNILGWAIMVSLGLNAAISVRVSN
                     ELGAGHPRTAKFSVVVVVLFAFVVGVLLAIILVIFRHQYPAIFASSLEVQQAVYALTP
                     LLAACLVINNIQPALSGVAIGAGWQAAIAYINIACYYIFGVPLGLIMGFALNWGVKGI
                     WVGMLTGTMVQTIILVAICYRTNWEKEASMAENRIKKWSGQKGVVGE"
     misc_feature    212..1516
                     /gene="LOC139841470"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; Region: MATE_eukaryotic;
                     cd13132"
                     /db_xref="CDD:240537"
     misc_feature    order(926..928,938..940,1022..1024,1031..1033,1268..1270,
                     1280..1282,1361..1363,1439..1441,1451..1453)
                     /gene="LOC139841470"
                     /note="putative cation binding site [ion binding]; other
                     site"
                     /db_xref="CDD:240537"
     polyA_site      1759
                     /gene="LOC139841470"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atattttatg tccattgtgt ctctcaacat ttaaatttaa atttaaatta ctactactaa
       61 taataattac tagagtatta tggacagtaa caccgacgca gtacctcttc ttaccacaaa
      121 aaccatcccg aaaaacgctc acttcaccgg agatgttgaa gatattcctc cgatcaccgg
      181 aattaatgat ttctttgttc aatttatgat tgaatcaaag aaactatggt ttcttgctgg
      241 ccctttgata ttcactactg tttgtcaata ctcacttggt gccatcactc aaacgttcgc
      301 cggtcatgtt ggtactctcg atctcgctgc tttttcgatc gaaaactccg taattgccgg
      361 tttcgctttg gggattacgg ttggaatggg aagtgcattg gaaacattat gtgggcaagc
      421 atacggagca gggcaaatgg aaatgttagg aatatacatg caaagatcat ggattattct
      481 attcgttacg ggtctaataa tgatgttcct ctacattttc gcaactccat tactcctctt
      541 aattggacaa accgaaccca tatcacacgc tgcagggaaa atggcattat ggatgatccc
      601 acaactattt gcgtacgcag cgaattaccc aatcgctaag tttttgcaag cgcaaagtaa
      661 gatcatggtg atgtctgtta tttctggtgt ggcattggtg ttacatacat tttttagttg
      721 gttgtttatg ttgaaattgg gatggggact atggggtgga gctattgtgc ttaatttttc
      781 atggtggttc atggttgtgg ctcaaatggt ttatattctt agtgggacat gtggtcaagc
      841 atggtcaggg tttagtatgg ctgcttttaa taatttatgg agttttgtta aactttcatt
      901 tgcatcagct attatgctct gtgtcgaaac gtggtatttt atggctttgg tattatttgc
      961 tggatactta aagaatgctg aaattgcagt ggatgcgctc tccatttgca caaacattct
     1021 tgggtgggca attatggtat cactcggatt aaatgcggca atcagtgtaa gagtatcaaa
     1081 tgaactagga gctggacatc caagaactgc aaaattctca gttgtggttg tcgtgctctt
     1141 cgcatttgta gtcggtgttt tgttggctat aatccttgtc attttccgac atcagtaccc
     1201 agccatattt gccagcagtt tagaagttca acaagctgtt tacgctctta cgccgctgct
     1261 agcagcatgt cttgtcatta acaatattca gcctgcactt tcgggggtgg cgattggggc
     1321 aggatggcaa gcagcaattg cttatataaa tatcgcatgt tactatatat ttggagttcc
     1381 tttgggacta attatgggat ttgcactcaa ttggggtgta aagggtatat gggtaggcat
     1441 gttaactgga acaatggtac agaccattat tttggttgct atttgttata gaaccaactg
     1501 ggaaaaagag gcatcaatgg ctgaaaatag aatcaaaaaa tggtcaggtc aaaaaggagt
     1561 tgtgggagag taatggaagg tttcatgaac ctaatcaagt tattatttta tgtattatgt
     1621 tgtatgttat gttatctatc attgatttgg aatgcaaatg catgtactga aaatccatgt
     1681 tctaatatct ttgtgaaatt ttgaatgaac tttctttttt taaaaaaaca caaccgagta
     1741 agttattttt gccatggaa
//
LOCUS       XM_071831688            3442 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841471), mRNA.
ACCESSION   XM_071831688
VERSION     XM_071831688.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3442
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3442
                     /gene="LOC139841471"
                     /note="uncharacterized LOC139841471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841471"
     CDS             1..1962
                     /gene="LOC139841471"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687789.1"
                     /db_xref="GeneID:139841471"
                     /translation="MFPNAARALSHIHDCNAVHADFRSAKILLDKDLEVKVVGSVIIP
                     CVKFTVTSDYNCYTDPVCNITKSVTHKSDVYSFGVVLIDMFCELYAKSLHMKKITAAR
                     GIHHSDLDDNIRKQMHSEAFTILSETINKCVNGEREERPDMAEIVKQLEKSLFLQWKH
                     DKPMLQKIGLDEIKTATNNFDETYLIGSGGFGMVYKAELNLFDAKFFLGTEGKIKKET
                     SKKPNLSYKQFVPGTEGKFKKEISEKPNIFDAKFFFGTDWKIKKEISKKPNNAYKQFF
                     EEGNQMKIPKKYKTTAIKRILVDEKGHGRKGFFLEIEMLRRCEHPNIVSLLGYCNEQS
                     ELILVYEFVPKGSLDDFLESTKKETYLTWVQRIKLCLDIAHGLDYLHTNMTDKEIIIH
                     RDIKSANILLGNNWEAKIADFGLSKFYSANQLRSTIVTNNIAGTEVYLDPEYSRTGHL
                     KKQSDIYSFGVVLFEILSGTLAYEKIYIDENNKGIAAVARRHFSEGTLMEMVDPEVME
                     EAEQLCFGLKVGPNQKSLKSFLKIAIQCIAETQGERPTLKDIINELEIALNLQEKRMD
                     ILKFSLEEIKFGTQNFSDKNFFRKEKFGKVYRGEVPYDNERKTVVLKVSRKEHNFQRE
                     LEILAGHKHENIIDIVGYCNEKDEKIIVY"
     misc_feature    <13..450
                     /gene="LOC139841471"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    874..1665
                     /gene="LOC139841471"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1777..>1959
                     /gene="LOC139841471"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgttcccaa atgctgcccg tgccttgagt catattcatg attgtaatgc tgtacatgct
       61 gatttccgta gcgctaaaat tcttttagat aaagatttgg aggttaaggt tgttggttct
      121 gttataatcc cttgcgttaa atttaccgtt acgtcagact ataactgtta cactgatcca
      181 gtgtgtaaca taaccaaaag tgtgacacat aaaagtgatg tgtattcttt tggtgttgtt
      241 ttgattgaca tgttttgtga gctgtacgca aagtccttgc acatgaagaa gattacggcg
      301 gctcgcggaa tccatcattc agacttggat gataatatac gaaaacaaat gcactcggaa
      361 gcattcacca ttttgtcaga aacgattaat aaatgtgtga acggagaacg cgaagagcgc
      421 ccagatatgg ctgagattgt taaacaactt gagaaaagtt tatttcttca atggaaacat
      481 gataagccaa tgttacagaa gatcggactt gatgaaataa agacagccac gaacaatttt
      541 gacgaaacat acctaatcgg atcaggcgga ttcggtatgg tatacaaagc agaactcaac
      601 ctttttgatg caaaattctt tttgggaaca gaagggaaga ttaagaagga aacttctaag
      661 aaacccaacc tttcttataa acaattcgta ccgggaacag aagggaagtt taagaaggaa
      721 atttctgaga aacccaacat ttttgatgca aaattctttt ttggaacaga ttggaagatt
      781 aagaaggaaa tttctaaaaa acccaacaat gcttataaac aattctttga ggaggggaat
      841 caaatgaaaa ttcctaagaa atacaagacg acagccataa aacgcatctt ggttgatgaa
      901 aaagggcatg gtagaaaagg gttctttcta gaaattgaaa tgcttcgtag atgtgagcat
      961 cccaacatag tatcacttct tggatattgt aatgaacaat ctgaattgat cctagtttat
     1021 gagtttgttc cgaagggtag ccttgatgat tttttggaaa gcacaaaaaa agaaacatat
     1081 cttacttggg ttcaacggat aaaattatgt cttgatattg cacatgggct ggattatctt
     1141 catacaaaca tgacagataa agaaatcata atccatcgtg atattaaaag tgccaacata
     1201 ttattgggca acaactggga ggctaaaatt gcggattttg ggctctccaa attctactcg
     1261 gctaatcaac ttcggagcac tatcgtgaca aataatattg caggcactga ggtgtacttg
     1321 gatcctgaat attcaaggac gggccactta aaaaaacagt cagacatata ctctttcgga
     1381 gttgttttat tcgaaatatt gtctgggaca ttggcctatg aaaaaatcta cattgatgaa
     1441 aataacaagg gtatagcagc cgtcgcacga aggcacttct ccgagggaac actaatggaa
     1501 atggtagatc cagaagtaat ggaagaagct gaacaacttt gttttggtct aaaggtgggg
     1561 cctaatcaaa agtctctaaa atcatttttg aaaatcgcaa ttcaatgcat agcagaaact
     1621 caaggcgagc ggccaacatt aaaagacatc attaacgaac tggaaattgc attaaacctt
     1681 caggaaaagc gcatggatat cttaaaattt tcacttgagg aaataaaatt tggtacacaa
     1741 aactttagtg ataaaaattt ctttaggaaa gaaaaatttg gaaaggtata ccgaggagaa
     1801 gttccatatg acaatgagcg taagacagtt gttttaaagg tcagcaggaa agaacataat
     1861 tttcaaagag agcttgaaat tctcgccgga cacaaacacg agaatatcat cgacattgtt
     1921 ggttattgca acgaaaagga cgaaaaaatt attgtttact aaaatgcgta taacggaaat
     1981 actctcgaca aacatgtgaa cgacgccagt cttacatgga taaaaagact tgagatatgt
     2041 gtaggaattg tgaatggctt aaagtttctt cacaaaggtt ttgctagaca acaatatgtt
     2101 gtacatggag acattaaaag tgcaaatatc gtattaaatg gaaattggat tgtgaaaata
     2161 tgctgttttg agttttcctt gataaatcat aaacataaag agatggatgg cgtctcgccc
     2221 agttttagtg atcccgtgta ccgtgatccg gtgtatcgaa aaactggtta cttaaccaaa
     2281 gaatctgata tttattcctt tggtttgatt ttatttgaga tattatgtgg aaaacttgca
     2341 tgcttgaagg actttagaga atccaaacaa tttctagact ttttagttga tgagcttgtg
     2401 tttgagggta ttcaagaaca aattgcaatg aaatcgcttg ctacatttgg aaagattgcc
     2461 tatcaatgct tgcatgacga gagatcaaaa cggccaacgg cgaatgaagt atatatgcaa
     2521 ctcaagaaag cattggatat ccaagttatt tcagatattt caaataagaa agtattgaat
     2581 gttaatgcat caagggggat gaaggataaa ttgttagtta aaaaggatct gtattcgttg
     2641 aggctcgaag aaggtgaaga tcttaggaat catattgtca cctttgatcg gttggtttgc
     2701 gagttgtcta acatggaaga gataataaaa gaagaggatt tggcactaat tttgttgtca
     2761 tcattaccca aatcatacaa gcgatttgtg gacaatatgt tattgggaag cacagatttg
     2821 aaactcagag acgtatttca gaatttaggt gaccacaact aaataattga aaactctctg
     2881 gtgggaagtg cactggtttc aaattctcaa tcacggttac tccgtattat gcgagtctcg
     2941 agatatacgg agtattactt atgttgggtg gtcttaatta gactagattt actgtgaata
     3001 tttttgtgga tatttatttt gttgataatg tagatacttt gtatattgtt tattatattt
     3061 tagggttaaa gccataaata ggccatatac tttcattttt gtctcaatgt aggctatata
     3121 ctccaaaaaa taccaatgta ggctatatac tttcataaag tatactaata tgaacgaaga
     3181 aaacttacta accggataaa caattaaacg atgacgtggc atcctacgtg gaggatgacg
     3241 ttggtgatac atcagaacaa gactgaaagt atatagccta catcggaaaa aactgaaaat
     3301 atatagccta catcggaaca aaactgaaag tatatgacct aattgtagcc atataaaatg
     3361 ccaaaaatgt taaataatta actttaccgg ttcaacaggt aacttgttaa atttgtgtac
     3421 atcgatacaa cttttaagag ta
//
LOCUS       XM_071831690            1298 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein BIG GRAIN 1-like E
            (LOC139841472), mRNA.
ACCESSION   XM_071831690
VERSION     XM_071831690.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1298
                     /gene="LOC139841472"
                     /note="protein BIG GRAIN 1-like E; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841472"
     CDS             212..1150
                     /gene="LOC139841472"
                     /codon_start=1
                     /product="protein BIG GRAIN 1-like E"
                     /protein_id="XP_071687791.1"
                     /db_xref="GeneID:139841472"
                     /translation="MSNILPHSSQPTRNSLDELDVFEAARYFSGANENFFIGNQKAAG
                     GKARILGNNTQKYSMRPFGRMSLDMPSHRENSNPLQAIFVDNPIMIKKEIKKSKQPSS
                     PGGKLAHFLNSLFNQTSSKKSKSKSKSTKDQDESPSSWRRKRRSSISHFTSANNSFNN
                     TNPTILSDSRSQFSNSTSSGFRTPPHYHMIAHTPTKTSSYRDTKSYSYSKPPPSQITK
                     IPINGNLNNIDNKHMSVEKVNIFDYKQGHHPDKYILKEDINDFKRFIKEDDGDSDSSS
                     DLFELTNCDLGFYSSGLPVYETTHMDSINRGAPIAS"
     polyA_site      1298
                     /gene="LOC139841472"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttaatcatt ccatgagaat actcttctcc acttctttta tatgcttttc attcatttcc
       61 aacttaagat acatacacca tatcatatct ttttatcaaa agatcgagaa gctaatatca
      121 taacttggaa ctcataacca agatttgtaa caatattagg ctttcataca ctctcttagt
      181 aaattaagtg ttcattttat tcaacccgag gatgtccaac atcttaccac attcatcaca
      241 acccacaagg aatagtttgg acgagcttga tgtgtttgag gcagctcgtt atttttcggg
      301 agccaatgaa aacttcttca ttggcaacca aaaagctgcc ggtggcaaag ctagaatttt
      361 aggtaacaat acacaaaagt attccatgag gccttttgga agaatgagtc ttgacatgcc
      421 aagccataga gaaaattcaa atcctctaca agccattttt gtagataatc ccataatgat
      481 caaaaaagag atcaagaagt caaaacaacc aagctcacca gggggaaagt tggctcattt
      541 cttgaattct ctcttcaatc aaacatcttc aaagaagtca aagtcaaaat caaagtcaac
      601 aaaggatcaa gatgagagtc ctagtagttg gagaaggaag agaagaagta gcattagcca
      661 ttttacaagt gcaaacaact ccttcaacaa tacaaacccc accattttaa gtgattcaag
      721 atctcaattt tcaaactcta caagttcagg ctttagaaca ccaccacatt atcacatgat
      781 agcacacaca cctacaaaga cctcaagcta tagagacacc aaaagctatt catattctaa
      841 acctccgcca agtcagatta ctaaaatacc catcaatgga aacctcaaca atattgacaa
      901 taaacacatg agtgtggaga aagtaaatat ttttgattat aaacaaggac atcatcctga
      961 taagtatatt ctaaaggaag atattaatga ttttaagagg tttattaagg aggatgatgg
     1021 agatagtgat tcaagttctg atctttttga gttaacaaat tgtgatctgg gtttttattc
     1081 aagtggttta cctgtttatg aaaccacaca tatggatagc atcaatagag gtgcaccaat
     1141 tgcgagctaa ttaattagca tgtggcctca ggttcagaaa tttctcaatc cgaaacatca
     1201 tgttttgtaa caaaacaccc tagctagtta attttaactt gtattgcttg ctgtatacat
     1261 gtagaaaatt aatcttaatt atcggttatt ttagttaa
//
LOCUS       XM_071831692             465 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841475), mRNA.
ACCESSION   XM_071831692
VERSION     XM_071831692.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..465
                     /gene="LOC139841475"
                     /note="uncharacterized LOC139841475; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841475"
     CDS             1..465
                     /gene="LOC139841475"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687793.1"
                     /db_xref="GeneID:139841475"
                     /translation="MVKWIHAYRLMDHNFWDVMMPANASWSWRKLLQISPMIQDHFLH
                     RIRNGGNTSIWYDIWSDHGHLVNVISRRNIIRAGFDGNEKFCDYISMNGWIWPVTWRN
                     EYPLLQTIAPPVLSIESDVVQWVDPSGYVSDFAVAKVWETISRSVFEHRQDR"
ORIGIN      
        1 atggtcaagt ggatccacgc ttatcgtctt atggatcaca atttttggga tgtaatgatg
       61 cctgcaaatg cgagttggag ttggcgtaaa cttcttcaga taagccctat gatccaagat
      121 cattttttac acagaatccg taatgggggt aacacctcaa tttggtatga tatatggtcc
      181 gatcatggtc acttggtgaa tgttatatct agaagaaata ttatacgcgc tggatttgat
      241 ggtaatgaaa agttttgtga ttacatttct atgaatgggt ggatttggcc agtaacatgg
      301 cgcaatgaat accctttgct tcaaacaatt gcccctcctg ttttgtcaat tgaatctgat
      361 gtggtgcaat gggttgatcc aagtggctat gtttctgact ttgcggttgc aaaagtgtgg
      421 gagactatca gcagaagtgt cttcgagcat aggcaagata ggtaa
//
LOCUS       XM_071831693             357 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841476), mRNA.
ACCESSION   XM_071831693
VERSION     XM_071831693.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..357
                     /gene="LOC139841476"
                     /note="uncharacterized LOC139841476; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841476"
     CDS             1..357
                     /gene="LOC139841476"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687794.1"
                     /db_xref="GeneID:139841476"
                     /translation="MAALNLRDSFSIFDTSKLKRWCELYPKDFNSLEMIELEEQLDMS
                     YNNIRKDQRFATLIGDSDLARWMDGNKKTSFFSFGLSVIKAVFYACVICAVEREALAN
                     VKEEDVIERVKKDTSP"
ORIGIN      
        1 atggcggcgt tgaatctacg tgattcattt tcaatattcg atacatcgaa gttaaaaagg
       61 tggtgtgagt tatatccaaa agatttcaat agtttggaga tgattgagct tgaagaacaa
      121 cttgacatgt cctataataa tattcgaaaa gatcaaagat ttgctacctt gatcggtgat
      181 tccgaccttg ctagatggat ggatggaaac aagaaaacat ctttcttttc ctttggttta
      241 tcggttatta aggctgtttt ttatgcttgt gtaatttgtg cggttgaaag agaagctctt
      301 gcaaatgtta aagaagaaga tgtaattgaa cgtgtcaaaa aagatacgtc accgtaa
//
LOCUS       XM_071831694            1143 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At2g23200 (LOC139841477), mRNA.
ACCESSION   XM_071831694
VERSION     XM_071831694.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1143
                     /gene="LOC139841477"
                     /note="probable receptor-like protein kinase At2g23200;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 Proteins"
                     /db_xref="GeneID:139841477"
     CDS             1..1143
                     /gene="LOC139841477"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At2g23200"
                     /protein_id="XP_071687795.1"
                     /db_xref="GeneID:139841477"
                     /translation="MDIFKFTLKDIQLGTENFSGKNFIRKEGSGILYRGEVPYNSGRK
                     TVILKVIKSSEEHSFLRELEILFGYKHENIIDIVGYCKEKDEKIIIYENAYKVNTLDS
                     RVNDIILTWTKRLEICVGIANGLKFLHNGFARQHSVIHGDVKSANIILNGDLTPKICC
                     FEFSLITNKNQEMKYVVNDDVRIPDYCEPVYCDPVYQKTGVLTKESDIYSFGVVLFEM
                     LRGTVAGVKDYIESKNFDDFLDDESVFEGIKEQIEAKSLATFRRIAYQCLHEDREIRP
                     KADEVCMQLKKALDIQVLRDRLVVKKDLYLLELEEGGNLSDHIITFKGLVSKLSTIDE
                     IIKDEDLALLLLLSLPKSYNPFVDNMLTGSTSLNLQDVLQKLGDNK"
     misc_feature    70..861
                     /gene="LOC139841477"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(70..81,88..90,94..96,139..141,145..147,223..225,
                     271..276,283..288,424..426,436..441,445..447,475..480)
                     /gene="LOC139841477"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    <889..1128
                     /gene="LOC139841477"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggatatct tcaaatttac gctaaaggac atacaattag gcacggaaaa cttcagtggg
       61 aaaaatttta ttagaaaaga aggttctggg atattatacc gaggagaagt tccgtacaac
      121 agtggacgta agacagtcat tttaaaggtc ataaaatctt ccgaagaaca tagttttctt
      181 agggagcttg aaatcctatt cgggtataaa cacgagaata ttatcgacat tgttggttat
      241 tgcaaggaaa aagatgaaaa aattattatt tatgaaaatg cgtataaggt aaatactctc
      301 gatagtcgtg tgaatgatat cattcttaca tggacaaaaa gacttgagat ttgcgtaggc
      361 atcgcgaatg ggttaaaatt tcttcataat gggtttgcaa gacaacattc agttatacat
      421 ggagacgtta aaagtgctaa tatcatactg aatggagatt tgactccaaa aatatgttgt
      481 tttgagtttt cgttgataac aaataaaaat caagagatga aatatgtcgt aaatgatgat
      541 gtgcggatcc ccgattattg tgaacccgtc tattgtgatc ccgtctacca gaaaactggg
      601 gttttaacca aagaaagtga tatttattca tttggtgttg ttttatttga gatgttgcgt
      661 ggaactgttg ctggtgtaaa agattatata gaatctaaga attttgacga cttcttagat
      721 gatgagtctg tgtttgaagg aattaaggaa caaattgaag cgaaatcgtt agctacattt
      781 cgaaggattg cctatcaatg cttgcatgaa gatcgagaaa tacgaccaaa agcggatgaa
      841 gtatgtatgc aactcaagaa agcactcgat atccaagtgt taagggatag attagttgtc
      901 aaaaaggatt tgtacttgct ggaactcgaa gaaggaggta atctgagtga tcatattatt
      961 acctttaaag ggttggtttc gaagttgtct accatagatg agataataaa agatgaggat
     1021 ttggcactac ttttgttgtt atcattaccc aaatcataca acccatttgt ggataatatg
     1081 ttgacaggat caaccagttt gaaccttcaa gatgtgcttc agaagttagg cgacaacaaa
     1141 taa
//
LOCUS       XM_071831695            2412 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841478), mRNA.
ACCESSION   XM_071831695
VERSION     XM_071831695.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2412
                     /gene="LOC139841478"
                     /note="uncharacterized LOC139841478; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841478"
     CDS             1..2412
                     /gene="LOC139841478"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687796.1"
                     /db_xref="GeneID:139841478"
                     /translation="MSSLFKELDHLRIHCDDISTATNDFDYRNIIETYDFDYRNIIET
                     FLTETRSGRIVDEADYYSSISVYRGELFKFGKWIDVIVEESKYMEEDEFLKVVSVLSY
                     SKHKNIPTFVGFCYNNKYTVSYLVSECDFSSNSLKSINNNKNLTCSQRLEICLSAAGA
                     LSHIHDCDVVHADFGSDKILLDKDLEAKVVGFGINSPLRFRYGRFAWYTDPVSKLTKT
                     VTRESNVYSFGIVLIDVFCQQYANSMHGKETPANPKFHYLEFDDDTRKEMHSEAFTIL
                     SETLNKCLNLERLWSPKMADVVKELEKALFLQRKHENPELIKIQLDEVKLATENFAEK
                     YLIGSGGYGKVYKAELEINDASSLEIEGKNQKDNYDYDGYSSEIEAKNQKEMVKKHNF
                     FSKLCFGMEGENKKEIPKKDIYKKEISKREIPKKRHTVAIKHILNDENGHGRQGFFLE
                     IEMLRRCNHLNIVSLIGYCDEGSELILAYEFVPNGSLDDYLGSIKKKTYLNWAHRIKM
                     CLDIAHGLDYLHTHVSDKEWIIHRDIKSANILLGKNWEAKIADFGLSKFYCANQFKST
                     IVTDKIVGTNVYLDPEYSRTGKLKKQSDIYSFGVVLFEIFSGTLAYEKIYTDENNKGL
                     AVVARRRFSEGTLMELVDSELLEEAEELLFGLKVGPNKESLKAFIKVAFQCVAETQGG
                     RPKLIDITKELEIALNLQLINIGVSSRAFGLQLLATKPDIAGYPRKASYYEEALITLN
                     STTNVCALLRSLSSLNINFTFRDLNDQASNLPPPATIISFLCSSHWGTQIELILKAGS
                     VRSRA"
     misc_feature    193..909
                     /gene="LOC139841478"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1285..2082
                     /gene="LOC139841478"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgtcgtctt tattcaaaga acttgatcac ttacgaatcc attgtgatga tatatcaact
       61 gctaccaacg attttgacta tagaaatatt atcgaaacat acgattttga ctatagaaat
      121 attatcgaaa catttcttac tgaaactaga tccggacgta tagttgatga ggcagattat
      181 tattcttcta tttctgtcta cagaggtgaa ctatttaagt ttggcaaatg gatcgacgtt
      241 atcgtagaag aaagtaaata tatggaagaa gatgaattct taaaagtggt ctcagtgctt
      301 tcttattcta agcataaaaa tattcccact tttgttgggt tttgttacaa caacaagtac
      361 acagtcagtt acttagtcag tgagtgtgat ttcagctcaa atagtttaaa gtccatcaat
      421 aataataaaa acctgacatg ttcccaaaga ttggaaatat gtttgagtgc tgctggtgcc
      481 ttgagtcaca tacatgattg tgatgtcgta catgccgatt tcggaagcga taagattctt
      541 ttagataaag atttggaggc taaagttgtt ggttttggta tcaactcccc tttacgtttt
      601 cgctatggta gatttgcatg gtacaccgac ccagtgtcga aattgaccaa aactgtgaca
      661 cgtgaaagta atgtgtattc ttttggtatc gttttaattg acgtgttttg tcagcagtac
      721 gcaaattcca tgcatggtaa ggaaactcct gcaaatccca aattccacta tctagaattc
      781 gacgatgata cacgcaaaga aatgcactca gaagcattca ccattttgtc cgagacgctt
      841 aataaatgct tgaatctaga acgtctctgg agcccaaaaa tggctgatgt tgtgaaagaa
      901 ctagagaaag ctttatttct tcaaaggaaa catgaaaatc cggaactcat caagattcaa
      961 cttgatgaag taaagttagc cacggagaat tttgctgaaa aataccttat tggatccggc
     1021 ggatatggta aggtgtataa agcggaactc gaaattaatg atgcgtccag tttggaaata
     1081 gaagggaaga atcaaaagga caattatgat tatgatggtt actcttcgga aatagaagcg
     1141 aagaatcaaa aggaaatggt taagaaacac aacttttttt caaagttgtg tttcggaatg
     1201 gaaggggaga ataaaaagga aattcctaag aaggacattt acaagaagga aatttctaag
     1261 agagaaattc ctaagaaacg tcatactgta gctataaaac atatcttaaa tgacgaaaat
     1321 gggcatggta gacaagggtt ctttctagag atcgaaatgc ttcgtagatg taaccatctc
     1381 aacatagtgt cacttattgg ctactgtgat gaaggttctg aattgatcct tgcatatgag
     1441 tttgttccaa atggttctct tgatgattat ttgggaagta taaagaaaaa aacttatctt
     1501 aactgggctc atcggattaa aatgtgtctt gatattgcac atggattgga ttatcttcac
     1561 acacacgtga gtgataaaga atggataata catcgtgata tcaaaagtgc caacatattg
     1621 ttgggaaaga attgggaggc caagattgct gactttgggc tctccaagtt ctactgtgcg
     1681 aatcaattta agagcaccat cgttacagat aaaattgttg gcactaatgt gtacttggat
     1741 cctgaatact caaggacggg caaattaaaa aagcaatcag acatatactc ttttggagtt
     1801 gttttattcg aaatattctc tgggacatta gcctacgaaa aaatttacac cgatgaaaat
     1861 aacaagggac ttgcagtcgt agcacgaaga cgcttctctg agggaacact aatggaatta
     1921 gtagattcag aactattgga agaagccgag gaactcctct ttggtctaaa ggtaggacct
     1981 aataaagagt ctctaaaagc atttataaaa gtcgcattcc aatgtgtagc agaaactcaa
     2041 ggcgggcgac caaaactgat agacatcact aaggaacttg aaattgcatt aaaccttcaa
     2101 cttattaaca ttggagtatc aagcagggct tttggtctgc agttactagc cacgaaacct
     2161 gacattgctg gctatcctag gaaagcgtcg tattatgaag aagcgcttat cacgctaaac
     2221 tctactacta acgtttgcgc cctcctgcgg tcattgtcat ctcttaacat taacttcact
     2281 ttcagggacc ttaatgacca agcaagtaac cttccaccac cagcgacaat catttccttc
     2341 ctctgttcgt ctcattgggg aacacagatt gaattgatcc tcaaggcagg atcagttcgt
     2401 tctcgagctt aa
//
LOCUS       XM_071831696             759 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841479), mRNA.
ACCESSION   XM_071831696
VERSION     XM_071831696.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..759
                     /gene="LOC139841479"
                     /note="uncharacterized LOC139841479; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841479"
     CDS             1..759
                     /gene="LOC139841479"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687797.1"
                     /db_xref="GeneID:139841479"
                     /translation="MADFMVEFINSETPTAANETVPQNVTWELHTDGASSSDGAGAGL
                     ILTSPTGEEHTYALCFAFSISNNEAEYEALLSVLHIAEKMGITALKVAVDSQLVANQL
                     NGTFEARDPAMQKYLKLTEELAKKFDSFSITQVPRSMNKKADTLSKLASLTFNHFAKD
                     VWVEVVNQKSTDVVQVAAPVKEVNTWMNPIVNYLKDGTLPSDSLTAKKIRMKAPMYVI
                     RDGVLYKKSFLGLLLRCVGPQEAETVIREVHEGT"
     misc_feature    79..453
                     /gene="LOC139841479"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(94..105,193..201,208..210,280..282,400..402,
                     442..444)
                     /gene="LOC139841479"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggccgact tcatggtaga attcattaat tccgaaacac caacagctgc aaatgaaacg
       61 gtaccccaaa acgtcacgtg ggagcttcac actgacggag cgtcaagctc agacggggcc
      121 ggggccggct tgatacttac aagtcctacc ggagaagaac acacctacgc tttgtgcttc
      181 gctttctcta tttccaataa tgaagcggag tatgaagcgt tgctctccgt gttacatatc
      241 gctgaaaaga tgggcattac ggcactgaaa gtggcggttg attcacaact ggtggcaaat
      301 cagttgaacg gaacgttcga agccagagac cctgcaatgc aaaaatattt gaaactgacg
      361 gaagaattag ccaaaaagtt tgattctttt tcaatcacac aagtgccgcg ttcaatgaac
      421 aaaaaggctg acaccctcag caagctcgct tcgctgacct tcaaccactt cgctaaagac
      481 gtatgggtgg aggtcgttaa ccaaaaatcc accgatgtgg tacaggtggc ggcaccagtc
      541 aaggaggtaa acacttggat gaacccaatc gtcaactatc tgaaagacgg aacgctacct
      601 tctgacagcc taacggctaa gaaaatccgc atgaaggctc ctatgtatgt tatacgtgac
      661 ggtgtattat acaagaagtc attcttggga ctgttgttac gttgcgtggg tccacaagag
      721 gcagaaactg tgataaggga agtgcatgaa ggaacttga
//
LOCUS       XM_071831697             963 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841481), mRNA.
ACCESSION   XM_071831697
VERSION     XM_071831697.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..963
                     /gene="LOC139841481"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841481"
     CDS             1..963
                     /gene="LOC139841481"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687798.1"
                     /db_xref="GeneID:139841481"
                     /translation="MAPKFDMFRTFGCRVFPYLRDYASHKLAPRSIVFFLAIACNIKL
                     CTYHSPILNGNDATFIWSFISRLHDEFAIKDLGRLVYFLGLEVLYTDSGLFLSQAKYA
                     RDILARAGLLDVKPVATPLATAEYFSSHGVPLQDHTMYHSLVGALQYLTITRPNLSYV
                     VNQNTEVDVWLLYFLGGNFVSWSGKKQPTAARSSCESEYRTLANTAAEIIWITHLLRE
                     LGVLSPDRPTILCENKSALFFSQNPILNKRSKHIDIDYHFLRELVSSDKLSTRFVPAT
                     LQLADIFTKSLPRPSFESFGAKLCVGSPPLLLRRGINDNHYHPI"
     misc_feature    <151..363
                     /gene="LOC139841481"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    520..870
                     /gene="LOC139841481"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggctccta aatttgacat gtttcgaaca tttggatgca gagttttccc ctacttgcgt
       61 gattatgcct ctcacaagtt agctcctcga agtattgtgt ttttcttggc tatagcatgc
      121 aatataaagt tgtgtacata tcactccccc atattaaatg gtaatgatgc tacctttata
      181 tggtcattca tctctcgcct tcatgatgag tttgctatca aagatcttgg tagactagtc
      241 tattttttag gtcttgaagt tctttatact gattcgggcc ttttccttag ccaagctaag
      301 tatgcccgtg acattcttgc tcgtgccggt ctacttgatg ttaagccagt cgccacacct
      361 cttgctactg ctgaatattt tagttctcat ggtgttcctt tacaggatca tacgatgtat
      421 cattcactag ttggtgccct tcaatactta acaatcacta gaccgaacct ctcttatgtc
      481 gtaaatcaaa acacagaggt cgacgtatgg ctactctatt ttttgggcgg caatttcgtg
      541 tcatggagtg gtaaaaagca accaactgca gcacgatcta gttgtgaatc tgagtatcgc
      601 actcttgcta acactgctgc tgaaattata tggataactc acttgcttcg tgagttagga
      661 gtattgtctc cggatcgacc aactatcttg tgtgaaaaca aaagtgctct cttctttagt
      721 caaaatccaa ttttgaacaa gcgctccaaa cacattgata ttgactatca ctttctacga
      781 gagcttgttt cctccgataa attgtccact cggtttgttc ctgccacgtt gcagttagcg
      841 gacattttta caaagagctt gccaaggcca tcatttgagt cttttggtgc caaactatgt
      901 gttggttctc caccacttct tttgaggagg ggtattaacg ataaccatta ccatcctatt
      961 taa
//
LOCUS       XM_071831698             351 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841482), mRNA.
ACCESSION   XM_071831698
VERSION     XM_071831698.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..351
                     /gene="LOC139841482"
                     /note="uncharacterized LOC139841482; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841482"
     CDS             1..351
                     /gene="LOC139841482"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687799.1"
                     /db_xref="GeneID:139841482"
                     /translation="MGVSKVETDNMVECFGYMAGTLPITYLGLKIGSTMKTSIDWGPL
                     LKNSGKDLRIGKRAPSNVVNKLEFLRHCFFWGGSNDVSKMAWVKWETCLMPHNKGGLN
                     IGSLAIKNQALLDK"
ORIGIN      
        1 atgggtgttt ctaaggtaga aacagataac atggtcgagt gtttcggata tatggcaggt
       61 accttaccta tcacctatct tggtctgaaa atcggttcta caatgaaaac gtcaattgat
      121 tgggggccac tgttgaaaaa ttcggggaaa gacttgcgga ttggaaagcg agccccatcc
      181 aatgttgtta ataaactcga gtttttgaga cattgtttct tttggggtgg gtcaaatgat
      241 gtctccaaaa tggcttgggt aaaatgggaa acttgcctta tgccccacaa taaaggagga
      301 cttaatatcg gttctcttgc aattaaaaac caagcacttc tcgataaata g
//
LOCUS       XM_071831700             630 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841483), mRNA.
ACCESSION   XM_071831700
VERSION     XM_071831700.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..630
                     /gene="LOC139841483"
                     /note="uncharacterized LOC139841483; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841483"
     CDS             1..630
                     /gene="LOC139841483"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687801.1"
                     /db_xref="GeneID:139841483"
                     /translation="MPIKQVLTKPEISCRLALWAVELGAYQISYLPRSALKGQVMADY
                     LAEMSGELEVINERTALKLVLDETWDLFTDGASCAEGAGAGLVLANPSGEEHMYALRF
                     NFDVSNNEAEYEALLDGLNFAKKINIAKLRAFTDSQLVANQFNGSFEAHDPSMQKYLQ
                     LLKELAVRFEHFEHAQVPRSQNKKADALSKLAALTFSHFQKQGLAMLNS"
     misc_feature    205..579
                     /gene="LOC139841483"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(220..231,319..327,334..336,406..408,526..528,
                     568..570)
                     /gene="LOC139841483"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgccaatca agcaagtttt aacaaaacca gagatatctt gtagacttgc attgtgggca
       61 gtcgaattag gcgcttatca aatatcttac cttccgcgta gtgctttaaa aggtcaggtt
      121 atggcggatt acctcgctga aatgtctgga gaattggagg tgattaatga gcgaaccgcg
      181 ttgaaactgg tacttgacga aacttgggat ttgtttactg atggtgcttc gtgcgcagaa
      241 ggtgcaggtg cgggtttggt tttggcaaac ccaagtggtg aggagcatat gtatgcactg
      301 cgttttaatt ttgatgtgtc aaataatgaa gcggagtatg aagcactact tgatggttta
      361 aattttgcga aaaaaattaa tattgctaag ttgcgagcat ttacagattc gcagttagta
      421 gcgaatcagt ttaatggctc tttcgaagca catgatcctt ctatgcagaa atacttgcag
      481 ctgttaaagg aattagcagt gcggtttgag cattttgaac atgcacaagt gccaagaagt
      541 caaaataaga aggcggatgc tttgagcaaa ttggccgctt taactttttc gcattttcaa
      601 aaacaaggcc tggcaatgtt aaattcctga
//
LOCUS       XM_071831701            1104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841484), mRNA.
ACCESSION   XM_071831701
VERSION     XM_071831701.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1104
                     /gene="LOC139841484"
                     /note="uncharacterized LOC139841484; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841484"
     CDS             1..1104
                     /gene="LOC139841484"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687802.1"
                     /db_xref="GeneID:139841484"
                     /translation="MTSAQTGEAWVMEVLNGHPIRSVNAFRMHPDLFIKLCGELETNY
                     GLQSTDKMSTFEMVGIFMYTLALGLSNRDVMERFQRSGETISRAFHEVLKSIIGRDKG
                     FQGLARNIIRPKDPTFQLVPPQIMNDKRYMPYFKDCIGCIDGTHIRACITESQQLPYI
                     GRKGVPTFNVMATCDFDMCFTYVSVGWEGSAHDTRVFMHSIQNKSMNFPQPPEGRYYL
                     VDKGYPDRKGYLVPYPKTRYHQSQFQKEPPNNMQEAFNRSHSSLRSYIERSFGILKKR
                     FHILSEMPRFSVQTQIDVITATFALHNYIRTNSQEDIMFAIIDEHPNYIPRDELNDVN
                     NHDTRTEGLFEGRRNEMKHVRNNIAASIWNDRH"
     misc_feature    424..909
                     /gene="LOC139841484"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 atgacttctg ctcaaacagg tgaggcttgg gtgatggaag ttttaaatgg tcatccaata
       61 cgatctgtaa atgcatttag aatgcatcca gatttgttta taaaattatg tggagaactt
      121 gaaacaaact atggattgca gtcaactgat aaaatgtcca catttgagat ggtggggata
      181 tttatgtata ccttggcatt gggattatct aatagagatg ttatggagcg ttttcaacgt
      241 tcaggggaga ctattagtag agcatttcat gaagttctaa agtcgataat tggtagagat
      301 aaaggtttcc aaggtctggc acgcaacatt ataagaccaa aagatccaac ttttcaacta
      361 gtaccacctc aaatcatgaa cgacaaaaga tacatgccgt atttcaagga ttgtattgga
      421 tgtatcgatg gtacacatat aagggcatgc attacagaga gtcaacaact accttatatt
      481 ggtagaaaag gagtacctac tttcaatgta atggcaacgt gtgattttga tatgtgtttt
      541 acatatgtat cagtcggatg ggagggatca gcacatgaca cacgtgtttt tatgcactca
      601 atccaaaata agtcaatgaa cttcccgcaa ccacctgaag gtagatatta tttggttgat
      661 aaaggatacc cggacagaaa gggatacctt gttccatatc ccaagacaag ataccatcaa
      721 tctcaatttc aaaaagagcc cccaaataat atgcaagaag cattcaaccg ttcacattca
      781 tctctacgaa gttatattga gaggtcattc ggaattttga agaaacggtt tcacatactt
      841 agtgaaatgc caaggtttag tgtgcaaaca caaattgatg ttatcacggc tacatttgca
      901 ttgcataact acattcgtac taatagtcaa gaagatatca tgtttgcaat aatcgatgaa
      961 catccaaatt acataccacg agatgagctt aatgatgtta ataatcatga cacacgcacc
     1021 gaaggactat ttgaaggaag aaggaatgag atgaaacatg ttcgtaacaa tattgctgct
     1081 tcaatatgga atgatcgtca ttaa
//
LOCUS       XM_071831702            1482 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841487), mRNA.
ACCESSION   XM_071831702
VERSION     XM_071831702.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1482
                     /gene="LOC139841487"
                     /note="uncharacterized LOC139841487; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841487"
     CDS             1..1482
                     /gene="LOC139841487"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687803.1"
                     /db_xref="GeneID:139841487"
                     /translation="MLTKALASEKLKGQPSPHDCLLGTFKPTKNESQPSPHDCLLGTF
                     KPTKNDIVSNPLRGIWRTMNVFYGECTCGQGDVDDIVTPPKWDRSYGGGCMQGEGKID
                     SSRSDGHVRSCPSSLGAARSRRGRDFRVRIRVGSWNVGSLTSKSRELVETLLKSKVDI
                     LCVQETRWKGEEAVDIGDYKLWFSGSRVARNGVGIFIGPRHKDNIVGVGRCSDRIMSV
                     RLVIQEESYMVICAYAPHAGLGEEEKSRFWESLDEVVRSCPADHRLLIGGDLNGHIGT
                     ISDGYAGVHGGFGYGVRNEEGRSILEFAVAHDLVVANSLFRKTEAQLATFHSGGHSTQ
                     IDYLLLRKGDLRTCRDCKALTTWTCSTQHRLLVMDLVPQRRVTRRGRPAQPRILWKNL
                     NEEKAETFKASVLERVEAVMDTVTHGDADQMWNSFASTIRDVAKETLGVAVGTSRGHK
                     SCRESWWISDEVQTKVALKQLRFRELVTCRDGTHDDRTRAEER"
     misc_feature    400..1110
                     /gene="LOC139841487"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(412..414,493..495,697..699,805..807,811..813,
                     1006..1008,1084..1089)
                     /gene="LOC139841487"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(493..495,1084..1086)
                     /gene="LOC139841487"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(697..699,811..813,1087..1089)
                     /gene="LOC139841487"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atgttaacaa aggctttagc aagtgagaag ctcaagggtc aaccatcacc ccatgattgc
       61 ttgcttggga ccttcaagcc caccaaaaac gaaagtcaac catcacccca tgattgcttg
      121 cttgggacct tcaagcccac caaaaacgac attgtgtcca acccattacg agggatctgg
      181 cgcaccatga acgtcttcta tggtgaatgc acatgtggtc agggcgatgt ggatgacatt
      241 gtcacacctc ctaaatggga ccggagttat ggtggtggct gtatgcaagg agaaggtaag
      301 atagactcta gtcgtagtga tggtcacgtg aggtcatgtc cttcgagctt aggggcggct
      361 aggtctagaa ggggtagaga ttttcgtgtt aggattagag taggtagttg gaatgtagga
      421 agtttgacga gcaaatcccg tgaacttgta gagacgttac ttaagagtaa agtggacata
      481 ttgtgtgttc aagagaccag atggaagggt gaagaggcgg ttgacattgg tgactacaag
      541 ttgtggtttt cgggttccag agtagctaga aacggggtag ggatctttat agggccccgt
      601 cataaggata atattgtggg tgtgggtagg tgtagcgata ggattatgtc ggttaggtta
      661 gttatccagg aggagtctta catggttatt tgcgcttacg cacctcatgc tggtttaggc
      721 gaagaagaaa aaagtcgctt ttgggaatcg ttagatgaag ttgtgaggag ttgccccgct
      781 gatcatcgat tacttattgg gggagacctt aatggacata taggaacgat ttcagacgga
      841 tatgcgggtg tccatggggg ctttgggtac ggagttcgaa atgaagaagg acgctccatt
      901 ctcgaattcg ctgttgccca cgatttggtt gttgcaaact ctttatttag gaagacggaa
      961 gctcagctag caaccttcca cagtggaggt catagtactc agattgatta tttgctgctt
     1021 cgcaaagggg accttaggac ctgcagagac tgtaaagccc tgactacctg gacctgttcc
     1081 actcaacaca gacttttggt catggacttg gttccgcaga gacgggttac taggagaggg
     1141 agacccgccc aacctaggat cctttggaag aatctgaatg aagagaaagc cgaaactttc
     1201 aaagcatctg ttttggaaag agtagaggca gtaatggata ctgttactca tggggatgca
     1261 gatcagatgt ggaatagttt cgcatcaact attagagatg ttgccaagga aaccttaggt
     1321 gtggcagtag ggacatcgag aggacacaag tcttgtagag aatcatggtg gattagtgat
     1381 gaggttcaaa ccaaagtcgc acttaagcaa ttgaggttta gggagctcgt tacatgtcgg
     1441 gacgggacac atgatgacag aactagggca gaagaaaggt ag
//
LOCUS       XM_071831703             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841488), mRNA.
ACCESSION   XM_071831703
VERSION     XM_071831703.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139841488"
                     /note="uncharacterized LOC139841488; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841488"
     CDS             1..645
                     /gene="LOC139841488"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687804.1"
                     /db_xref="GeneID:139841488"
                     /translation="MASYLLNSESDLKDERIVALIQELEGEDAEVESSECVPRSRIYI
                     PRDREKAAENLWKDYFSDAPVFPQHKFKRRFRMRIQLFLRTSRGISDFDSHNIPDYFS
                     YFREPFDAIGRPTFTILQKMTSALRQLAYGTAADMFDEYLKMKRYMRSPNAYDVERLY
                     SKHEEKHDFKGMLGSTKCMHWEWKNCPVALKGQYTRGDHKKPTIMLEAVASFDL"
     misc_feature    436..>642
                     /gene="LOC139841488"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcatcgt atttacttaa ttcggaatcc gatttgaaag acgagcgtat tgttgcacta
       61 attcaagaat tagaaggtga agatgccgaa gtcgaatcat ccgagtgtgt tccaagatcc
      121 cgaatttata ttcctagaga tcgagagaaa gccgcagaaa acttatggaa ggattatttt
      181 agtgacgcgc ccgtgtttcc gcaacataaa tttaaaaggc gttttcgtat gcgtattcag
      241 ttatttctcc gaacttctcg aggtatttct gatttcgata gtcataatat tcccgattat
      301 ttttcctatt ttagggaacc ttttgatgct atcggtaggc cgacttttac aatattgcaa
      361 aaaatgactt cagctctacg ccagttggcg tatggaaccg ctgccgatat gtttgatgaa
      421 tacttaaaaa tgaaacgtta catgagatct cccaatgcat acgatgttga acgattatat
      481 agtaaacatg aggagaaaca tgattttaag ggtatgctcg ggagtactaa atgtatgcat
      541 tgggagtgga agaattgtcc agttgcttta aagggacaat acactcgagg tgatcacaag
      601 aaacccacca ttatgctaga agcagttgct tcgtttgact tgtga
//
LOCUS       XM_071831705             516 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841489), mRNA.
ACCESSION   XM_071831705
VERSION     XM_071831705.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..516
                     /gene="LOC139841489"
                     /note="uncharacterized LOC139841489; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841489"
     CDS             1..516
                     /gene="LOC139841489"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687806.1"
                     /db_xref="GeneID:139841489"
                     /translation="MSITTQFATKENGVQLQCPMLTATNYTTWAIRMEAIMDAQGLWE
                     SIETTEGVAVDEKKTKSARAFIFQGIPEDILLQVAKKKNAKEIWDSLKTRFLGADQVQ
                     KARIHTLISEFEALRMKETETIDEFAWKLSGMVSKYNSLGSTIEDSVLVLKLLDSVPD
                     KFLRLIAHIYS"
     misc_feature    61..141
                     /gene="LOC139841489"
                     /note="Domain of unknown function (DUF4219); Region:
                     DUF4219; pfam13961"
                     /db_xref="CDD:433608"
     misc_feature    187..513
                     /gene="LOC139841489"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtctatca caactcaatt cgcaacaaaa gaaaacggtg tacagttgca atgcccgatg
       61 ttgacggcca caaattatac aacatgggct ataaggatgg aagcaataat ggatgcacaa
      121 ggattgtggg aatccattga gacaacagaa ggagttgcgg ttgatgagaa gaagaccaaa
      181 tcagcccgtg ctttcatctt tcagggtata cccgaagaca tcttattaca agttgcaaag
      241 aagaagaatg ctaaagagat atgggactca ttgaagacaa ggtttctggg cgctgatcaa
      301 gtacagaagg ctagaattca cactcttata agtgaattcg aagcattgcg tatgaaggaa
      361 actgaaacaa ttgatgaatt tgcttggaag ttaagcggga tggtgtcaaa atataatagc
      421 cttggttcta ccatagaaga cagtgtgttg gtcctaaaat tattggactc ggttccggat
      481 aaattcctcc ggttaatcgc ccatatatac tcttga
//
LOCUS       XM_071831706            1071 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841490), mRNA.
ACCESSION   XM_071831706
VERSION     XM_071831706.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1071
                     /gene="LOC139841490"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 39 Proteins"
                     /db_xref="GeneID:139841490"
     CDS             1..1071
                     /gene="LOC139841490"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687807.1"
                     /db_xref="GeneID:139841490"
                     /translation="MVVTFLPDEIIINILARLPAKPLVRFRCVSKYWHCMLMEPYFMN
                     LRSRKAIILAINKGYLDFIDVDNNNYTTFKRRYPLEYSTGARVIGSFNGLVLMVILNE
                     YFTLNAFVLYNPFTGEFKKLLDPPTQIISCKSGFGFGYGGTNPTEDLKIVKFTSCRDI
                     CEVYDFKTNSWSSQSSKKYDINCITFAYPVGTFSNGNLYWIRSEHVLLAFGVKDMVLS
                     EIVLPRGSNFIGDIGTINGCLCALKMTTSSKFELWVMNDVDSTWANTHSFTLDLKWDI
                     FYHTLNIFDDGKILMVNPFSQLIIYDVLKSSYETLNISFPEHFHRFFKKNCVQFVETL
                     VSPLDVCFSRWGGREKKSNKIK"
     misc_feature    13..126
                     /gene="LOC139841490"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(16..18,28..30,37..42,49..54,64..66,70..75,85..93,
                     97..99)
                     /gene="LOC139841490"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    328..909
                     /gene="LOC139841490"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
     misc_feature    922..>1053
                     /gene="LOC139841490"
                     /note="Required for respiratory growth protein 8
                     mitochondrial; Region: RRG8; pfam17068"
                     /db_xref="CDD:293673"
ORIGIN      
        1 atggtcgtca cctttctacc tgatgagatt attatcaata tacttgctag gcttccagca
       61 aagccgttgg tacggtttcg gtgcgtatcc aagtattggc attgtatgct tatggagccg
      121 tactttatga atttgagatc acgcaaagcc atcattctcg ctataaacaa gggatactta
      181 gacttcatag acgtcgacaa taataattat acgacattca agcgtcggta tccgttagag
      241 tacagtacag gagccagagt tattggatcg ttcaatgggt tagtcctaat ggtcattcta
      301 aatgaatact tcactctaaa tgctttcgtt ttatacaatc cttttactgg cgagtttaag
      361 aaacttttag atcctcctac tcagattatt agttgtaaga gcggatttgg atttggctac
      421 ggtggtacta atcccactga agaccttaaa attgttaagt tcacgagttg tcgtgatatc
      481 tgcgaggtct acgactttaa aacgaattcg tggagctcac agagttcgaa aaaatacgac
      541 atcaactgca ttacgtttgc ctatcccgtg ggtacgtttt caaatggaaa tttgtattgg
      601 attagatcgg aacatgtgtt gcttgccttt ggtgttaaag atatggttct ttctgagata
      661 gttctacctc gcggttccaa ttttattgga gatataggta cgataaacgg atgcctttgt
      721 gcgctcaaga tgaccacttc atctaaattc gagttgtggg tgatgaatga tgttgactct
      781 acgtgggcga atacacattc atttacgtta gatttaaaat gggacatctt ttaccacact
      841 cttaatatct ttgatgatgg gaaaattctt atggtgaatc cctttagtca actcattatt
      901 tacgacgttt tgaaaagctc ttatgaaacg cttaatattt ctttcccgga acactttcat
      961 cggttcttta aaaaaaactg tgtacagttt gtggagactt tggtttcacc tttagatgtc
     1021 tgtttctcga gatggggtgg aagagaaaag aagtcaaaca agataaaatg a
//
LOCUS       XM_071831707             558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841491), mRNA.
ACCESSION   XM_071831707
VERSION     XM_071831707.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..558
                     /gene="LOC139841491"
                     /note="uncharacterized LOC139841491; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841491"
     CDS             1..558
                     /gene="LOC139841491"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687808.1"
                     /db_xref="GeneID:139841491"
                     /translation="MGSMQILNAIKAKVEVPKVMAKGLQFVEVYVRGNRVRALVDTGA
                     THNFVSTEEAKRLGIKEIKEGGMMKTIGEWEGTIDLSVMPIDDFKLVLGMEFLDKKGY
                     NKNETCYLAIARQETAEEKGKLEVPKEIEKVLDEFKDVMPKELPRKLPPRREIDHAIE
                     LEPGSKPPSKAPYRMPPPELEELQR"
     misc_feature    79..291
                     /gene="LOC139841491"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    121..129
                     /gene="LOC139841491"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    121..123
                     /gene="LOC139841491"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgggatcga tgcaaatact caacgctatc aaggccaagg tggaggtacc caaagtaatg
       61 gctaaaggac tccaattcgt ggaagtttat gttcgaggaa accgggtacg agctttggta
      121 gatacgggag ctactcataa ctttgtctcc accgaggaag ctaagagatt ggggattaaa
      181 gagataaagg agggcggaat gatgaagacg attggagaat gggaaggaac gattgatcta
      241 tcggtcatgc ctatagacga cttcaagtta gtacttggga tggagttcct agataagaag
      301 ggatacaaca agaatgagac ttgctattta gctatagcaa ggcaagagac ggccgaagaa
      361 aagggaaaac tagaggtacc taaggagatt gagaaagtcc ttgatgagtt caaggatgtc
      421 atgcctaagg agttaccaag gaagctacca cctaggagag agatagacca tgcgatcgag
      481 ttggagccgg gatcaaaacc accttccaaa gccccttacc gaatgcctcc acccgagttg
      541 gaggagttgc agagataa
//
LOCUS       XM_071831708             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            F-box/LRR-repeat/kelch-repeat protein At2g27520-like
            (LOC139841493), mRNA.
ACCESSION   XM_071831708
VERSION     XM_071831708.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139841493"
                     /note="F-box/LRR-repeat/kelch-repeat protein
                     At2g27520-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139841493"
     CDS             1..783
                     /gene="LOC139841493"
                     /codon_start=1
                     /product="F-box/LRR-repeat/kelch-repeat protein
                     At2g27520-like"
                     /protein_id="XP_071687809.1"
                     /db_xref="GeneID:139841493"
                     /translation="MVTLNEYFTLNAFVLYNPFTGEFKKLLDPPTQIISCKNGFGFGY
                     GGTTPTEDLKIVKFTSCRDICEVYDFKTNSWSSQSSKKYHINCITFAYPVGTFSNGNL
                     YWIRLEHVLLAFGVKDMVLSETVLPRGSNFIGDIGTINGCLCALKMTTSSKFELWVTN
                     DVDSTWANTHSFTLDLKWDIFYHTLNIFDDGKILMVNPFSQLIIYDVLKSSYETLNIS
                     FPKHFHQFFKKNCVQFVETLVSPLDVCFSRWGGREKKSNKIK"
     misc_feature    40..621
                     /gene="LOC139841493"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggtcactc taaatgaata cttcactcta aatgctttcg ttttatacaa tccttttact
       61 ggcgagttta agaaactttt agatcctcct actcagatta ttagttgtaa gaacggattt
      121 ggatttggct acggtggtac tactcccact gaagacctta aaattgttaa gttcacgagt
      181 tgtcgtgata tctgcgaggt ctacgacttt aaaacgaatt cgtggagctc acagagttcg
      241 aaaaaatacc acatcaactg cattacgttt gcctatcccg tgggtacgtt ttcaaatgga
      301 aatttgtatt ggattagatt ggaacatgtg ttgcttgcct ttggtgttaa agatatggtt
      361 ctttctgaga cagttctacc tcgcggttcc aattttattg gagatatagg tacgataaac
      421 ggatgccttt gtgcgctcaa gatgaccact tcatctaaat tcgagttgtg ggtgacgaat
      481 gatgttgact ctacgtgggc gaatacacat tcatttacgt tagatttaaa atgggacatc
      541 ttttaccaca ctcttaatat ctttgatgat gggaaaattc ttatggtgaa tccctttagt
      601 caactcatta tttacgacgt tttgaaaagc tcttatgaaa cgcttaatat ttctttcccg
      661 aaacactttc atcagttctt taaaaaaaac tgtgtacagt ttgtggagac tttggtttca
      721 cctttagatg tctgtttctc gagatggggt ggaagagaaa agaagtcaaa caagataaaa
      781 tga
//
LOCUS       XM_071831709            1122 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841494), mRNA.
ACCESSION   XM_071831709
VERSION     XM_071831709.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1122
                     /gene="LOC139841494"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 36 Proteins"
                     /db_xref="GeneID:139841494"
     CDS             1..1122
                     /gene="LOC139841494"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687810.1"
                     /db_xref="GeneID:139841494"
                     /translation="MAVTFLPDEIIINILARLPANSLVRFRCVSKYWHCMLMEPYFMN
                     LRSRKGIILPINKEYLHFIDVDNNNYTTFKRRYPLEYSTGARVIGSFNGLVLMVTLNE
                     YFTLNAFVLYNPFTGEFKKLLDPPTQIISCKSGFGFGYGGTTPTEDLKIVKFTSCRDI
                     CEVYDFKTNSWSSQSSKKYDINCITFAYPVGTFSNGNLYWIRSEHVLLAFGVKDMVLS
                     EIVLPRGSNFIGDIGTINGCLCALKMTTSSKFELWVMNDVDSTWANTHSFTLDLKWDI
                     FYHTLNIFDDGKILMVNPFSQLIIYDVSKSSYETLNISFPKHFHRFFKKNCVQFVETL
                     VSPLDVCFSRWGGREKKSKQDKMKNLLMQCFNLIDYNVI"
     misc_feature    13..126
                     /gene="LOC139841494"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(16..18,28..30,37..42,49..54,64..66,70..75,85..93,
                     97..99)
                     /gene="LOC139841494"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    328..915
                     /gene="LOC139841494"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
     misc_feature    922..>1113
                     /gene="LOC139841494"
                     /note="Required for respiratory growth protein 8
                     mitochondrial; Region: RRG8; pfam17068"
                     /db_xref="CDD:293673"
ORIGIN      
        1 atggccgtca cctttctacc tgatgagatt attatcaata tacttgctag gcttccagca
       61 aactcgttgg tacggtttcg gtgcgtatcc aagtattggc attgtatgct tatggagccg
      121 tactttatga atttgagatc acgcaaaggc atcattctcc ctataaacaa ggaatactta
      181 cacttcatag acgtcgacaa taataattat acgacattca agcgtcggta tccgttagag
      241 tacagtacag gagccagagt tattggatcg ttcaatgggt tagtcctaat ggtcactcta
      301 aatgaatact tcactctaaa tgctttcgtt ttatacaatc cttttactgg cgagtttaag
      361 aaacttttag atcctcctac tcagattatt agttgtaaga gcggatttgg gtttggctac
      421 ggtggtacta ctcccactga agaccttaaa attgttaagt tcacgagttg tcgtgatatt
      481 tgcgaggtct acgactttaa aacgaattcg tggagctcac agagttcgaa aaaatacgac
      541 atcaactgca ttacgtttgc ctatcccgtg ggtacgtttt caaatggaaa tttgtattgg
      601 attagatcgg aacatgtgtt gcttgccttt ggtgttaaag atatggttct ttctgagata
      661 gttctacctc gcggttccaa ttttattgga gatataggta cgataaacgg atgcctttgt
      721 gcgctcaaga tgaccacttc atctaaattc gagttgtggg tgatgaatga tgttgactct
      781 acgtgggcga atactcattc atttacgtta gatttaaaat gggacatctt ttaccacact
      841 cttaatatct ttgatgatgg aaaaattctt atggtgaatc cctttagtca actcattatt
      901 tacgacgttt cgaaaagctc ttatgaaacg cttaatattt ctttcccgaa acactttcac
      961 cggttcttta aaaaaaactg tgtacagttt gtggagacat tggtttcacc tttagatgtc
     1021 tgtttttcga gatggggtgg aagagaaaag aagtcaaaac aagataaaat gaaaaacttg
     1081 ctaatgcaat gttttaactt gattgattat aacgttattt ag
//
LOCUS       XM_071831710            1206 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841495), mRNA.
ACCESSION   XM_071831710
VERSION     XM_071831710.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1206
                     /gene="LOC139841495"
                     /note="uncharacterized LOC139841495; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841495"
     CDS             1..1206
                     /gene="LOC139841495"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687811.1"
                     /db_xref="GeneID:139841495"
                     /translation="MTRICLSVIPSAALKWKTWNSLRANTSSWTLNAVDVVGRVLNVG
                     EPQPQKSGAVILEFYLANERGRRMKTTLWGTLGPSFVEKIHAANALYCIILTSVLVKK
                     TFNGNLSLSITSATQIINDIQIPTLEKFLEKMSGVELPADVEDTSAVWQLPPLKEGML
                     SELIAMVQKGKKHISDDVFKCRVDITNIHLKNSWYYNTCSVCKARKGLSRKHNQHWCE
                     SCSDVVPEPLSRFRVQCDVKDGTASTVIVLLDETAEELTNTTAARLLLELDAETCSTV
                     FPNALANLLNIKQVVLLKTISYFEHGPYESFNCVKVYPHEIALENPPTEDSGDDLGPA
                     TVDKALKLVSPSPSAVKAAKRTIEVPTPLKVAERVTRRKYVVTSDTEDEDGIAGDDTN
                     TKTSVCTDA"
     misc_feature    <97..840
                     /gene="LOC139841495"
                     /note="replication factor-a protein 1 (rpa1); Region:
                     rpa1; TIGR00617"
                     /db_xref="CDD:273177"
     misc_feature    514..963
                     /gene="LOC139841495"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(538..540,862..864,868..870,937..939)
                     /gene="LOC139841495"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(553..561,700..711,715..717,733..741,745..747,
                     859..861,874..882,916..924)
                     /gene="LOC139841495"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atgacgagga tttgtttatc cgtcatccct tcagctgcgt tgaaatggaa gacatggaac
       61 tcacttcggg caaatacgtc atcgtggact ctgaatgctg tagacgtagt tgggcgtgtc
      121 ctgaacgtcg gggagcccca accacagaaa tcaggggcgg tcattctaga attttacctt
      181 gctaatgaaa ggggtcgaag aatgaaaacc acactttggg gaaccttggg tccgtctttt
      241 gtggagaaga tccatgctgc taatgctttg tattgcatca ttctaacctc cgtattagtc
      301 aaaaagacct tcaacggcaa cctatctctc tcgatcacct ccgccaccca aattatcaat
      361 gacatccaga ttccgacgct tgagaagttc ctagagaaaa tgagtggcgt tgaactccca
      421 gccgacgtgg aagacacttc tgcagtgtgg cagcttccac cactaaaaga gggaatgctt
      481 tctgagctta ttgcaatggt acagaagggt aaaaagcaca tctcggatga tgtgttcaaa
      541 tgcagagtcg atatcacaaa catccaccta aaaaacagct ggtactacaa cacttgcagt
      601 gtttgtaagg cacggaaggg gctctcacga aagcataacc aacactggtg cgagtcgtgc
      661 agcgatgttg ttccagagcc actatcaagg tttcgtgtgc aatgtgatgt caaagatgga
      721 actgcgtcca cagttattgt ccttttggat gagacagctg aggaactaac caacaccact
      781 gcagcgaggc tgttgctcga gctagatgcg gagacttgca gcacggtgtt tccgaatgcg
      841 ctcgctaatc tcctgaatat caagcaagtg gttttgttga agacaatatc ctattttgag
      901 cacgggccat atgagagttt caactgtgtt aaagtgtacc cgcatgaaat tgctctcgag
      961 aacccaccca ctgaagattc gggagacgat ttggggcctg caaccgttga caaagctttg
     1021 aaactggtca gcccttcgcc ctccgcagta aaagccgcaa aaagaactat agaagttcct
     1081 actcctttga aggttgcaga gcgtgtcacc cgccgcaagt atgttgttac aagtgacact
     1141 gaggatgagg atgggatagc tggagatgac acaaatacta agactagcgt ttgtaccgat
     1201 gcatag
//
LOCUS       XM_071831712             879 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841496), mRNA.
ACCESSION   XM_071831712
VERSION     XM_071831712.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..879
                     /gene="LOC139841496"
                     /note="uncharacterized LOC139841496; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841496"
     CDS             1..879
                     /gene="LOC139841496"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687813.1"
                     /db_xref="GeneID:139841496"
                     /translation="MVLSHYSGKRRCGNSLLKHRFSRIYRIAIEKEARVSDLVQRLNS
                     ELTFSWNWSRTLTGRLVSEVRKLEEDIAGTVFKSEGSDSWVWRLSTGGRWSTKLLSSL
                     ILHHSRNQNNSLPETQRNSLVPSKVALFIWRASKGRIPCRVELDKRGLDLDSVRCPIC
                     DDNIETVEHSLISCKRAREIWEFIYKWWQFGSPDNLNLDAAFKGNGFAFKSNFGKTLW
                     QAVEWVTGYTIWKHRNESVFNRNKMCSAVIVSEIQVLSHLWISNRVKGFEIEWLRWLL
                     NPLSFDTLCASRTGIG"
     misc_feature    <358..540
                     /gene="LOC139841496"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggttctct cacattattc tgggaagaga cggtgtggaa atagcttgtt gaagcacagg
       61 ttttcgagga tttacagaat tgctatagaa aaagaggcgc gggtcagtga tttggtacaa
      121 cggttaaaca gcgagttaac attttcatgg aattggtcga gaactttaac aggaagatta
      181 gtcagcgaag tcaggaaatt agaagaggat atcgctggta cggtttttaa aagcgagggt
      241 tcagattcat gggtatggag gctgtcaacg ggtggtagat ggtcaacaaa attactttca
      301 tccttaatac ttcatcactc aagaaaccaa aacaactcac tgcctgaaac acaacgaaat
      361 agcttggttc catctaaggt cgcgctgttt atttggcggg cgagcaaagg cagaattccg
      421 tgtcgggtag aacttgataa acgaggtcta gatttggatt cggtgaggtg tccgatatgt
      481 gacgacaata tagaaacggt ggaacattcg ctcatttctt gtaaaagggc acgtgaaatt
      541 tgggagttca tttataaatg gtggcaattt ggatctcctg ataatctgaa tttggacgcg
      601 gcttttaagg gtaatggatt tgcatttaag tcaaactttg ggaaaacgct atggcaagcg
      661 gtggaatggg tcaccggata cacaatatgg aagcatcgta atgaatcggt cttcaatcgg
      721 aacaagatgt gcagtgctgt gattgtgagt gaaatccaag tgctaagtca tttatggata
      781 tcaaatagag tgaaaggatt cgagatcgag tggttaagat ggcttcttaa tcctttatct
      841 ttcgatactt tatgtgcatc cagaacggga ataggctag
//
LOCUS       XM_071831713            1884 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 70 kDa peptidyl-prolyl
            isomerase-like (LOC139841497), mRNA.
ACCESSION   XM_071831713
VERSION     XM_071831713.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1884
                     /gene="LOC139841497"
                     /note="70 kDa peptidyl-prolyl isomerase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841497"
     CDS             1..603
                     /gene="LOC139841497"
                     /codon_start=1
                     /product="70 kDa peptidyl-prolyl isomerase-like"
                     /protein_id="XP_071687814.1"
                     /db_xref="GeneID:139841497"
                     /translation="MTTNSVILCTQSLLAVTTTTSGFRILHQAVDYLNEEGKIDDDDD
                     DKNFVKRVSCWVNGAACSLKLNDCKEVIKLCLLVIKSNLQLMTARKQSNYEYYNVKAL
                     YRRAQAYMESSEKGLGGRYTEQINIHVLISIFFFWFLNFVLFYREIKVFQKTLRQLQA
                     ESNERDAKLYTNMFTRMAKDCSIGTKKPKLENTDKDKKRW"
     polyA_site      1884
                     /gene="LOC139841497"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgactacaa attcagttat tctttgtaca caatcgttgt tagctgtaac caccaccact
       61 tctgggttcc gtattctaca tcaggcagtt gattatctta atgaagaagg gaaaattgat
      121 gatgatgatg atgataaaaa ttttgtcaaa agagtttcat gttgggtaaa tggtgcagct
      181 tgtagcctca aacttaatga ctgcaaggaa gtaatcaaac tatgtttatt ggtaataaaa
      241 tctaatttac aattaatgac tgcaaggaag caatcaaact atgaatatta caatgtgaaa
      301 gctttgtaca gacgagctca agcttatatg gaaagttctg aaaaaggcct tggaggccga
      361 tacacggaac agataaatat tcacgtttta atctctatat tttttttttg gtttctaaat
      421 tttgtcttat tttacaggga gataaaagtg tttcaaaaaa cattaaggca acttcaagct
      481 gagagtaatg aaagagatgc aaagctctat actaatatgt ttacacgaat ggctaaagat
      541 tgttccatcg ggacaaagaa accgaaacta gagaacacag acaaggataa aaaaagatgg
      601 tgatatggct tctcaaccac ctacgcttca aaccctaaat tgcaattgag agtgcagatg
      661 tttacggttt ttgatcccaa ccactacagc atgtttttga ttacttccag gtatgtgagt
      721 gagagatagc aatcgatgac tctaagaggt gtgcaaagga agtgaacttt ggaattttgt
      781 agcatgtatt tttgtgtgcg aaagctgttt tgttaccagc gttttaaaag aagtgtgctt
      841 gcatcttggc atagcaattt gtagattgca gccatggcga agcgtttttt gggtgtagta
      901 gcagattcac agtttcatgt tcttgctgtt gatgattgca ttgttgatag aaaattgatt
      961 gaaagattgc tcaaaatctc atcttttcaa gttactactg ttgattctgg aagtaaagct
     1021 ttagaatttt tgggactaca tgaagatgaa gaaatgaaag caaatcaaac atttgtttcc
     1081 ccaaaatgtt aatactaatc aggtttattc gttactaagg ttttggttat acgtatcagt
     1141 tgttaccaca gtgattttgt tcacagccag cagttagtcc gtctaaattt tctcttcaaa
     1201 tgctatattt ctttggtttc cgttttggtg gttatcaatt atgttaatgg ttttgtacgt
     1261 ataagccctt tgtttatgtg tattgcggat ttttacagta gttggtgagt ttgatcattg
     1321 tcgctcatag tgttttgcct gcattttctt aaggcgttca tcaaaaagaa ttcgcaaatg
     1381 tgtaggcagc caaaattggg tttgaaaggt acaatcgttc atcaaaaaga atctgcgagt
     1441 gtgtaggcag ctaatagtat ttgatgcgtt ttgttaaccg gtctgatggt gaattttgtc
     1501 cttcctcttc acatttactg aataaaaaag gacaaacact accataggtt tcaatgaaaa
     1561 aggtatctac atgtccctta tgcaaggcga gtttttatag catacaaaag atggaagagg
     1621 ctgcatcttc cgatcagaaa atatactcta aaacagttct taacaaccct tttgccattg
     1681 atgtatgcgt tctaccatac gtcgaatcat atacacatga gtttatggta acctttcttt
     1741 ttattacatt catttggtat tgaattgtaa accatgttca tgatataatt tgggtaaatt
     1801 tgcttatgat atggctgtaa ttgtttttgg ttgtagtttg tatgttattt tgtgatatgg
     1861 ctgtcaacaa atgattgtcg ttta
//
LOCUS       XM_071831714             906 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides short-chain
            dehydrogenase/reductase 2b (LOC139841498), mRNA.
ACCESSION   XM_071831714
VERSION     XM_071831714.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..906
                     /gene="LOC139841498"
                     /note="short-chain dehydrogenase/reductase 2b; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139841498"
     CDS             1..906
                     /gene="LOC139841498"
                     /codon_start=1
                     /product="short-chain dehydrogenase/reductase 2b"
                     /protein_id="XP_071687815.1"
                     /db_xref="GeneID:139841498"
                     /translation="MVSSSSKQNQLTNCSPTNAEIWWSKDSVAIVTGSNKGIGYALVK
                     RFAELGLTVVLTARDQSKGLKAMDSLKVQGLERNVCFCQLDISDPASIRSFVSWFQSK
                     FDEFDILVNNAAVSFNAMGENSVDHAETTINTNYYGSKLFSEAMLPLFRRSSSMSRIL
                     NISSRLGTLDKLNNEQMKAILEDKERLTEDRIDKVVSVFLQDIMEKRWETQEWPKVWT
                     DYSVSKLALNAYSQILAKRYEGAVSVNCFCPGFTRTSMTDGKGNFSADDAAKMAATIA
                     LLPTRLLTTGKFYAVSMSHVISSKL"
     misc_feature    82..867
                     /gene="LOC139841498"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; Region:
                     Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
     misc_feature    order(97..99,103..108,112..114,169..177,334..342,484..492,
                     658..660,670..672,745..756)
                     /gene="LOC139841498"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:187585"
     misc_feature    order(403..405,490..492,658..660,670..672)
                     /gene="LOC139841498"
                     /note="active site"
                     /db_xref="CDD:187585"
ORIGIN      
        1 atggtatcat catcatctaa acagaaccaa ctaaccaatt gcagccccac aaacgctgaa
       61 atatggtggt caaaagactc agtagcgatt gtgactggct cgaacaaagg tattgggtac
      121 gcgttggtta aacgatttgc tgagttaggg ttaaccgttg tgttaaccgc tagagatcaa
      181 tcaaaaggtt tgaaagccat ggattcactt aaggttcaag gactcgaacg taatgtttgt
      241 ttttgtcagc ttgacatatc tgatcctgcc tccattcggt cttttgtctc ttggtttcaa
      301 tccaaattcg atgaatttga tattctagtg aacaatgcag cagtatcttt taatgccatg
      361 ggagagaatt cagtagatca cgcagaaacc accataaaca cgaactacta cggatccaaa
      421 ctgttttcag aagccatgtt gccccttttt cgtcgctcat cttctatgag tcgcattctc
      481 aatatcagtt ctcgacttgg cacattagat aagttaaaca acgagcaaat gaaggcgata
      541 cttgaagaca aagaaagact aaccgaagat cgaatagata aagttgtgag tgtgttttta
      601 caagacataa tggaaaaaag atgggagacg caagaatggc ccaaggtatg gactgattat
      661 tcggtgtcta aactcgcctt aaacgcgtac tcacaaattt tggcaaagag gtatgaaggt
      721 gcggttagtg tcaattgttt ttgtcctggg ttcactcgaa catcaatgac ggatggtaaa
      781 ggcaacttct cagctgatga tgctgccaaa atggctgcaa cgattgcatt gcttccgact
      841 cggcttttaa caactggaaa attttatgca gtatccatga gtcatgttat aagttccaaa
      901 ttatag
//
LOCUS       XM_071831716            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139841500), mRNA.
ACCESSION   XM_071831716
VERSION     XM_071831716.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139841500"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 38 Proteins"
                     /db_xref="GeneID:139841500"
     CDS             1..1038
                     /gene="LOC139841500"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071687817.1"
                     /db_xref="GeneID:139841500"
                     /translation="MAAVDFLPDEIVLNILARLPTKPLLRFRCVSRYWLRMLMDPYFM
                     KLRSHKNIILHINRENLYFIDSNVSTNDSTYSVFTRCYPLEDLHTIRPFARLIGSFNG
                     LVLIVYIIDFILYNPFTGVTSKKLPDPPTPIKYRNGYGLGYGDTPSDLKIVKLKEYSR
                     RYEVYDFNRNSWSSWSSDKYGIRYTMFLHNVGTFVNGYLYWIRSEHVLIAFSVKDMVL
                     SEIYLPSTSKIIGNLGTINGCLCWLKMPNSSKFELWVTKEPSIESSWVNTYSFTLDHK
                     WDFYYHPLNIFDDGKILFVTPLKQLIIYDISKGSYETLNISLISERVLINYMNMNCTQ
                     YVETLVSPLDV"
     misc_feature    13..129
                     /gene="LOC139841500"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(19..21,31..33,40..45,52..57,67..69,73..78,88..96,
                     100..102)
                     /gene="LOC139841500"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    289..888
                     /gene="LOC139841500"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggccgctg tcgacttttt acctgatgag attgttctca atatacttgc taggcttcca
       61 acaaagccat tgttacgatt tcggtgcgta tccagatatt ggcttcgtat gcttatggac
      121 ccttacttta tgaagttgag atcacataaa aacatcattc tccacattaa tagggaaaac
      181 ttatacttca tagacagtaa tgtatctact aatgacagta catattcagt attcacgcgt
      241 tgttatccgt tagaggacct acatactatt cgtccatttg ctagacttat tggatccttc
      301 aatgggttag tccttatagt ttatataata gatttcattt tatacaatcc ttttactggt
      361 gttacttcca agaaacttcc ggatcctcct actccgatta agtatagaaa tggatatgga
      421 cttggctacg gtgatactcc tagtgactta aaaatcgtta agttgaaaga atattcccgt
      481 cgttatgagg tctacgactt taataggaat tcatggagct cttggagttc ggataaatac
      541 ggcataaggt acactatgtt tctacataat gtgggtacat ttgtaaatgg atatttgtat
      601 tggattagat cagaacatgt gttgattgcc ttcagtgtta aagatatggt tctttctgag
      661 atttatctac catctacttc gaaaatcatt gggaatctag gtacgataaa tggatgcctt
      721 tgttggctca aaatgcctaa ttcatccaaa ttcgagttgt gggtgacgaa ggaaccctcc
      781 attgagagct catgggtgaa tacatattcg ttcacgttag atcacaaatg ggacttctat
      841 tatcaccctc ttaatatttt tgatgatgga aaaattcttt ttgtgacacc gttaaagcaa
      901 ctcattatct acgatatttc aaaaggctct tatgaaacgc ttaatatcag tttgattagc
      961 gaacgcgttt taatcaatta catgaacatg aattgcacac agtatgtgga gactttggtt
     1021 tcacctttag atgtctga
//
LOCUS       XM_071831717             970 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841501), mRNA.
ACCESSION   XM_071831717
VERSION     XM_071831717.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..970
                     /gene="LOC139841501"
                     /note="uncharacterized LOC139841501; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841501"
     CDS             89..862
                     /gene="LOC139841501"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687818.1"
                     /db_xref="GeneID:139841501"
                     /translation="MKIRDDDMPTSSKIKFDVSDDEESEVVVAEEESASEDDEENEIH
                     EVLANVTFEELQKARSDGSHVVNSKPKLERKGKRENKNRPMEISSKKPVGRFREVIQA
                     PKKVIRDPRFESLCGTLDVDGFKKRYNFLYDIELPAEKERLKKQMKKTKDPEAFDELK
                     ERAAWIDKQLKSASTKHTDKEILVKHKKKEREAAKQGKKPFYLKKTEIRKQELVEKFK
                     KLKASGQLASFIEKKRRKNAAKDHRFMPYRRPNENQQES"
     misc_feature    320..796
                     /gene="LOC139841501"
                     /note="rRNA biogenesis protein RRP36; Region: RRP36;
                     pfam06102"
                     /db_xref="CDD:461829"
     polyA_site      970
                     /gene="LOC139841501"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctcgcacaa attcactcaa agctttcggt gaatcgatat atttccatta acaactcgac
       61 gcatcatcct gctaatttgg agattaatat gaagattcgc gatgatgata tgcctacgtc
      121 gagtaaaatc aaattcgatg tgagcgacga cgaagaatca gaagtagtag tagctgaaga
      181 agaatcagct tctgaagatg atgaggagaa cgagatacat gaagtgcttg caaatgttac
      241 gtttgaggag ttgcagaagg cacgttcgga tggatcacat gtggttaatt cgaagcctaa
      301 gttagagagg aagggtaaaa gagagaacaa gaataggcca atggagatta gtagcaaaaa
      361 accagttggt aggtttagag aagtcattca ggcacctaaa aaggttattc gtgacccgcg
      421 atttgaatca ttatgtggaa cactagacgt agatgggttc aagaagagat ataactttct
      481 atatgatatt gaacttcctg ctgagaaaga gagattgaag aagcagatga agaaaacaaa
      541 ggacccagaa gcctttgatg agttgaaaga gcgagcagcg tggattgaca agcagttgaa
      601 atcagcatcc acaaagcata ctgataaaga gattcttgta aagcacaaga agaaggaaag
      661 agaggcagca aaacaaggga aaaaaccttt ttatttgaag aaaaccgaaa tccgaaagca
      721 ggaacttgtt gagaaattca agaaactcaa ggcatctggc cagcttgcat cctttattga
      781 gaaaaagagg agaaaaaacg ccgcaaaaga ccacagattc atgccgtatc gaagaccaaa
      841 cgaaaaccaa caagaaagtt agaaccatta ctttattgct ttattgatgt ataatgcaag
      901 cacctaactt catgctttag ttttgccatt caaagtttgg tgtatttgaa ttatttaaat
      961 ttttagatta
//
LOCUS       XM_071831718             600 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841502), mRNA.
ACCESSION   XM_071831718
VERSION     XM_071831718.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..600
                     /gene="LOC139841502"
                     /note="uncharacterized LOC139841502; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841502"
     CDS             1..600
                     /gene="LOC139841502"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687819.1"
                     /db_xref="GeneID:139841502"
                     /translation="MRDTSKFCDFHNDFGHETDDCIQLRQAIEEAVRSGKLTHLVKGI
                     RNPKVPKQEPRTEEKKSNMDNAILTVAECFAVKKPRTYKRERKSGVIDWEEISFPALD
                     TITPSDKPVIINGRIFEREVHRVYLDGGSACDIMYVHCFDQLSPAIKACLNPSRVLLI
                     GFSGERCWPIGEVDLDFAIGEPPLTRTETLDFVVVRAVS"
ORIGIN      
        1 atgagagaca caagtaaatt ttgtgacttt cataatgact tcggccatga aacggacgac
       61 tgcatacagc taaggcaagc tatcgaagag gcagtcagat ctgggaaatt gacacattta
      121 gtaaagggca tacgcaaccc gaaggtacca aagcaagagc ccagaaccga agaaaagaaa
      181 tcgaatatgg acaacgcaat acttacggtc gcagaatgtt tcgcagttaa gaagccaaga
      241 acctacaaga gggaaagaaa gagcggagta atagattggg aagagatctc tttcccagca
      301 cttgacacga tcactccctc cgacaaacct gtcataatca atgggcgaat cttcgagaga
      361 gaggtacacc gagtgtactt ggatggtggc agcgcatgcg atatcatgta tgtacattgc
      421 ttcgaccagc ttagccccgc cattaaggct tgcctgaacc catcgagggt actgctaatt
      481 gggttctctg gagaaagatg ctggccaatc ggagaggttg acctcgactt cgccatcgga
      541 gagccaccac taactagaac cgaaacgctg gattttgtag tggttcgggc cgtctcgtag
//
LOCUS       XM_071831720            1779 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841505), mRNA.
ACCESSION   XM_071831720
VERSION     XM_071831720.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1779
                     /gene="LOC139841505"
                     /note="uncharacterized LOC139841505; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841505"
     CDS             1..1779
                     /gene="LOC139841505"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687821.1"
                     /db_xref="GeneID:139841505"
                     /translation="MAPKRKGMSEEEVENKINQTIMNLLPNIVAQPIDAMPASTPVKA
                     ENWITHIEKIYRVLGCEERFWVPLAVYKLEGDAQRWWIALRQVKGGIDFEDSLDWINF
                     KELFFRQYFYEVEKEAVIREYANIKQGSDESINDFTKRFLRLVGLIGAAAGSVEDQAR
                     KYKWVVHGRYCSKMINLKCFDVAEAADYAQNLEMERAEYLATKNDDGKNKRVKIAQPL
                     RSVPAPTTKQGQQSGNQGYLYRPQGQQRGNGNGGVNANAPCGTCGKNHPGRVCYRSAG
                     SCFACGEVGHLAKDCKNPRPGFVSRVPPPAPGGRVFAMTAAQATDAKGTISGHVFVHH
                     RTLFVMFDSGSTHSIVSVKSLKYLKVSPTWLSTPFTISTPMGSIEIIDRVFRNCRLEF
                     NDYMFPANLFPMTMHDFDIILGMDWFSRHHANIDCYSKRILFGNHSIPDCVFNGDLPI
                     KSIKVISALKAQKLILHGYVGYLASIQNLSIESPSLENIDVVREFPDVFPDELRGLPP
                     VREVEFSIDLIPGSQPISKAPYRMAPLELQELKEQLQEFIDCGFIQPSVSPWGAPVLS
                     GYHQLHVKEEDILKAVYRTRYGYYEF"
     misc_feature    202..477
                     /gene="LOC139841505"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    772..>927
                     /gene="LOC139841505"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    925..1308
                     /gene="LOC139841505"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1024..1026,1030..1032,1036..1038,1111..1119,
                     1234..1236)
                     /gene="LOC139841505"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1024..1032
                     /gene="LOC139841505"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1024..1026
                     /gene="LOC139841505"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1111..1122,1132..1143)
                     /gene="LOC139841505"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggcaccaa aaagaaaagg aatgtctgag gaagaagtag aaaacaagat taaccaaact
       61 atcatgaatt tgttacccaa cattgtagct caacctattg acgcgatgcc tgctagtact
      121 cctgttaaag ctgagaattg gatcactcac attgagaaga tataccgagt gcttggttgt
      181 gaagagaggt tttgggttcc attggctgtt tataaactag agggggatgc tcagcgttgg
      241 tggattgctt tgagacaagt gaaagggggt atcgattttg aggattcatt agattggatt
      301 aatttcaagg agttattttt tcgtcagtac ttttatgagg tggagaaaga ggcggtgatt
      361 cgggagtatg cgaatattaa gcaagggagt gatgagtcta ttaatgattt cactaagagg
      421 tttttgaggc ttgtgggttt gattggagct gctgctgggt ctgttgagga ccaagcccgt
      481 aagtataaat gggttgttca tgggcgttac tgctctaaaa tgattaatct gaaatgtttt
      541 gatgtcgctg aggcagccga ttatgctcag aatttggaga tggagcgagc cgagtatttg
      601 gctactaaaa atgatgatgg taaaaacaag agggttaaga ttgcacaacc actacgatct
      661 gtgcctgcac cgactaccaa acagggtcaa caatctggga accaagggta tctgtaccgt
      721 ccccaagggc aacaaagggg taacggaaat ggtggtgtta atgccaatgc accttgtggg
      781 acttgtggaa agaatcatcc gggaagagtt tgttatcgta gtgcgggttc atgttttgct
      841 tgtggagagg ttggtcactt agctaaggat tgcaagaatc ctagacctgg gtttgtttcg
      901 agggttcctc caccagctcc tggtggacgc gtctttgcca tgactgctgc tcaggctact
      961 gacgcaaaag gtactattag tggtcatgta tttgtacacc atcgtaccct cttcgttatg
     1021 tttgattctg gctctacgca ctcgattgtg tctgttaaga gcttgaaata tttgaaagtg
     1081 tctccaactt ggttgtctac tccgtttacg atctctaccc caatgggtag tattgaaatt
     1141 atagatcgtg tgtttcgaaa ctgccgtttg gaatttaatg actacatgtt tcccgcaaat
     1201 ctctttccta tgaccatgca tgactttgac attattcttg gcatggattg gttttctcgc
     1261 catcacgcga atatcgattg ttattctaag aggattttgt ttggaaatca ttctataccc
     1321 gattgtgtct ttaatggtga tcttcccata aaatctatta aggttatctc agcgcttaag
     1381 gcgcaaaagc tcattttaca tggttatgtt ggttatttag cttcgattca gaatttgtct
     1441 atcgagagtc cttcgcttga aaatattgat gttgttcgag agtttcccga tgtatttcct
     1501 gacgaattgc ggggtttgcc tccagttcgt gaagttgaat tttcgattga tctgattcct
     1561 ggttctcaac cgatatcaaa agctccttat cgtatggcac cactcgagtt gcaagaactc
     1621 aaggagcaat tgcaagaatt catagattgt ggttttattc agccaagtgt gtcaccttgg
     1681 ggtgcgccgg ttttgtctgg gtatcatcag ctccatgtta aagaagaaga tatccttaag
     1741 gctgtttacc gcactcgtta tgggtactat gagttttag
//
LOCUS       XM_071831721            2298 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841506), mRNA.
ACCESSION   XM_071831721
VERSION     XM_071831721.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2298
                     /gene="LOC139841506"
                     /note="uncharacterized LOC139841506; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841506"
     CDS             1..2298
                     /gene="LOC139841506"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687822.1"
                     /db_xref="GeneID:139841506"
                     /translation="MKNVSVNLPITDVLKGMPNYGRFIKEIISQRVKYHDETSFFIEE
                     ECNKILASRPRIPKKLRDPGKFVFPCKFSELEVFNALTDLGANINLMPHSLYERLGLG
                     PLKPTRIRIRLDNHSFNNAIGIAEHILVSIDTLVFPVDFVIMEMKEDLQVPLILGRPF
                     LATADTIILVQRNQLNIRVGEELVTINIREAMKQPSNTDDDDECYAFNHIDLYMHNEI
                     EKLLKVDTTGFDQTCDNEIVDVEANFKELMNVNVDEFESENEAIRKMSFESIPHEDRF
                     RIKTSWEKPPTLELKEHLEHLEYAYLKEENQLPVIISSKLTQDQKTRLFSLLKSHHKA
                     IAWKTTDIPGINSSYCTHKILMEKNFKPVVQRQRRLNPNMKEVVKKEVIKLLDAGLIY
                     PIFDSPWDKDFELMYDASDYALGVVLGQRVDQHFRPIYYASKTLTEAQLNYTTIEKEL
                     LEVFMDDFLVGDSFDHCLKDLDKMLTRYESANLVLNWEKCHLMDKDFELMCDASDYAL
                     GVVLGQRVDQHFRPIYYASKTLTEAQLNYTTIEKELLEGLSYQQKKKFFNDLRYYFWE
                     EPHLFRIGADQVIRRCVYGQEAREISRSCHSGPTGGHFGPNHATKKVFNSGFYWPMIF
                     KDSHELVKHCDSCQRSGSISKRDEMPQTGIQICEVFDVWGLDFMDPFPNLNKCVYILV
                     LVDYVSKWAGAKALPTNDARVVVKFLKGLFARFDVPKALISDRWTHFSNSLMERVMEK
                     YGVTHHFFTTYHPQTSGQVENTIAL"
     misc_feature    238..486
                     /gene="LOC139841506"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(247..249,253..255,259..261,331..339,463..465)
                     /gene="LOC139841506"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    247..255
                     /gene="LOC139841506"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    247..249
                     /gene="LOC139841506"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(331..342,352..363)
                     /gene="LOC139841506"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1198..>1353
                     /gene="LOC139841506"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    <1354..1479
                     /gene="LOC139841506"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1477..>1695
                     /gene="LOC139841506"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    1756..1920
                     /gene="LOC139841506"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    1981..2259
                     /gene="LOC139841506"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgaaaaacg tctcggttaa cttaccgatc accgatgtgc tcaaaggaat gccaaactat
       61 ggtcggttca tcaaggagat aatatctcaa agggttaaat atcatgatga aacgtctttc
      121 tttattgaag aggaatgcaa taagattcta gcatcaaggc cacggattcc taagaagtta
      181 agagatccgg gaaaattcgt tttcccttgt aaattcagtg agttagaagt gttcaatgca
      241 cttaccgatt tgggggcaaa cattaactta atgccccact cactttacga gagactcggt
      301 cttggacctc ttaaaccaac acggattagg ataagattgg ataatcattc atttaacaac
      361 gctattggta tcgccgagca catcttggtt agcattgaca ccttggtgtt cccggttgat
      421 tttgttatta tggagatgaa ggaggacctt caagtccccc ttatcttagg tagaccattt
      481 ttggcgaccg ccgacaccat catcttagtg caacgcaatc aactcaacat tagagttggt
      541 gaagagcttg tgaccatcaa tatccgggaa gctatgaagc aaccgagtaa caccgatgat
      601 gatgatgagt gctatgcctt taaccacatt gacctttata tgcataacga aattgaaaag
      661 cttttaaagg ttgataccac ggggttcgac caaacttgtg ataatgaaat tgtggatgta
      721 gaggccaatt ttaaggaatt gatgaatgtt aatgttgatg aatttgaaag tgaaaatgag
      781 gccattcgga aaatgtcatt tgagtctatc cctcatgaag atagatttcg aatcaagact
      841 tcgtgggaga agcctccgac tcttgagctt aaagagcacc tcgagcatct tgaatatgct
      901 tatcttaagg aagaaaacca acttccggtg attatttcct cgaaactcac ccaagaccaa
      961 aagacccgac ttttctcact acttaagtcc caccataagg ccatagcatg gaagaccacg
     1021 gacatcccgg ggatcaattc atcatattgc acacataaga ttctcatgga aaagaacttc
     1081 aaaccggttg tccaacgaca acgaagactt aacccaaaca tgaaggaggt tgtaaaaaag
     1141 gaagtgatca aattgttgga cgcggggctt atttatccaa tattcgactc accctgggat
     1201 aaagactttg aattgatgta cgatgcgagc gattatgcgc ttggcgtggt gcttggtcaa
     1261 agagttgacc aacactttag accgatttac tatgcaagca agaccttaac cgaggcccaa
     1321 ttgaattata ccactattga gaaggaactt cttgaggtat tcatggatga ctttttggta
     1381 ggagattcat tcgaccattg tcttaaagat ctggataaaa tgttaactcg ttatgaaagt
     1441 gcaaatttgg ttcttaattg ggaaaaatgc cacctcatgg ataaagactt tgaattgatg
     1501 tgcgatgcga gcgattatgc gcttggcgtg gtgcttggtc aaagagttga ccaacacttt
     1561 agaccgattt actatgcaag caagacctta accgaggccc aattgaatta taccactatt
     1621 gagaaggaac ttcttgaggg tttgtcatac caacaaaaga aaaagttttt caacgattta
     1681 cggtattact tttgggaaga accacacttg ttccgcattg gggcagatca agtaattcgg
     1741 agatgtgttt atgggcaaga agcccgcgag atttcaagga gttgtcatag tggacctacg
     1801 ggagggcatt ttggtccgaa ccacgccact aagaaggtgt tcaattccgg tttctattgg
     1861 cccatgatat tcaaggactc ccacgaattg gtgaaacatt gtgattcttg ccaaaggtcg
     1921 ggatccatct ccaagagaga tgagatgccc caaaccggca ttcaaatatg cgaggtattc
     1981 gacgtatggg gtttagattt catggatcca ttcccgaact taaataagtg tgtttatatc
     2041 ttggtattgg tagattatgt ttcgaaatgg gccggggcca aagccttgcc aactaatgat
     2101 gcgagagtag ttgttaagtt tttgaaagga ttgtttgcta ggtttgatgt accaaaagcg
     2161 ttgatctcgg atcgatggac acatttttct aatagcctaa tggagagagt catggaaaaa
     2221 tatggtgtaa cacatcattt ttttaccact taccatcccc aaactagtgg tcaagtcgag
     2281 aacacaatcg cgctttga
//
LOCUS       XM_071831722             522 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841507), mRNA.
ACCESSION   XM_071831722
VERSION     XM_071831722.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..522
                     /gene="LOC139841507"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139841507"
     CDS             1..522
                     /gene="LOC139841507"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687823.1"
                     /db_xref="GeneID:139841507"
                     /translation="MNQRKYCLELLHEYGPLGCKPLSTPNEQNVVIATEVSDKDPLLE
                     NITYYQKLVGKFIYLTMTRPDIAYFVHCLSQFMHKPLFPHLKLAIHVLRYLKLSPRKG
                     VLVENEGNFQLSAYVDADWAKASSFRKSVNGYCVYLGNSLISWKSKKQNVVSRSSAES
                     EYRAMSNVATEIM"
     misc_feature    343..>519
                     /gene="LOC139841507"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaccaaa ggaaatattg tttggaatta ttacatgaat atgggccgtt aggatgtaaa
       61 cctttaagta ctcctaatga acaaaatgtt gttattgcta ctgaagtttc tgataaggat
      121 cctttacttg aaaatattac atattatcaa aagttagttg gtaaatttat ttacttgaca
      181 atgactaggc ctgatattgc ttactttgtg cattgtctaa gtcagtttat gcataaacca
      241 ttatttcctc atcttaaact tgctattcat gttttgagat atttaaagtt atctcctagg
      301 aaaggtgttt tggttgaaaa tgaaggtaat tttcaattat ctgcttatgt tgatgctgac
      361 tgggctaaag ctagttcttt tagaaaatct gttaatggtt actgtgtata tctgggaaat
      421 tctcttattt cctggaagag caaaaagcaa aatgttgtct ctagatcttc agcagagtct
      481 gaatatagag caatgagcaa tgtggctact gagattatgt ag
//
LOCUS       XM_071831723             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CRIB domain-containing
            protein RIC5-like (LOC139841509), mRNA.
ACCESSION   XM_071831723
VERSION     XM_071831723.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139841509"
                     /note="CRIB domain-containing protein RIC5-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841509"
     CDS             1..441
                     /gene="LOC139841509"
                     /codon_start=1
                     /product="CRIB domain-containing protein RIC5-like"
                     /protein_id="XP_071687824.1"
                     /db_xref="GeneID:139841509"
                     /translation="MKGLLKGLRYISEIFEADNSKEPEIQIGAPTDVKHVAHIGCDGP
                     SSNAPSWMNEFQGSDAGSSDLNGSSKGSMGTPNHHGKSKQAKKQSSNASVNSSDTDTK
                     PSRARRTKNSSAGSESPSQDSGAKKNRKKKRASNQDSSASSNSK"
     misc_feature    76..219
                     /gene="LOC139841509"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; Region: CRIB; cl00113"
                     /db_xref="CDD:412170"
     misc_feature    order(79..81,88..90,97..99,103..105,112..114,151..153,
                     163..165)
                     /gene="LOC139841509"
                     /note="GTPase interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:238077"
ORIGIN      
        1 atgaaaggtc tattgaaagg cctacgttac atttcggaaa tttttgaggc agataattct
       61 aaggaaccag aaatacaaat tggagcgcca acggatgtta agcatgtagc ccatattggt
      121 tgcgatggtc cttcttcgaa cgctcctagt tggatgaatg agtttcaagg ttctgatgcc
      181 ggatcatcgg atttaaatgg tagttcgaag ggatcaatgg gtaccccgaa tcatcatgga
      241 aagtcaaagc aagctaaaaa acaatctagc aacgcttctg taaattcgtc agacacagat
      301 acgaaaccta gtcgtgctag gcggaccaag aactcaagtg cggggtcaga gtcaccgtca
      361 caagattcag gagcgaaaaa gaacaggaag aaaaagagag catcaaatca agattcgtct
      421 gcctcaagta attcaaaatg a
//
LOCUS       XM_071831724            2175 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841510), mRNA.
ACCESSION   XM_071831724
VERSION     XM_071831724.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2175
                     /gene="LOC139841510"
                     /note="uncharacterized LOC139841510; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841510"
     CDS             1..2175
                     /gene="LOC139841510"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687825.1"
                     /db_xref="GeneID:139841510"
                     /translation="MGRIAQMLSERQLGSLPANTQANPNIGPMKNEHVPNKDEPVVIE
                     KEKEPEASTTVKAKVSQEPLARVYKAPIPYPQRLKKDKLASQYKKFSYMIKQISVNMP
                     LKDVLLGMQNYGRFIKDLISDKGKYEEVSTTFLNEECSAILKKQNTPPKLGDTGSFLI
                     PCKMGDSVVYDALADLGASINLMPYSLYLKLGLGELTPTRMGIRLADCSCSYPIGKAE
                     DLPVGVNSFTFPTDFVILEMEEDAKVPLILGHPFLNTVDAIIFVQKKQLSIGVGDERV
                     TFSVDKAMKYPSSSDDSCFRIDVIDNCVDDDLQELFGIDTSDVTPLGESDEFHVESEL
                     EELLKVVTDFEDKDVENFDLKEEEPFEEIKNEDRLLNVLRDHKRAIAWKTTDISGINP
                     SFCTHKILVEDEYKPVVQRKRRLNPNMKEVVKKEVVKLLDAGLIYPISDSPWVSSVQV
                     VPKKGGTTVVLNERNELVPTRTVTGWRVCIDYRRLNDATRKDHFPLPFIDQMLERLAG
                     KEFYCFLDGFSGYYQIPIDPKDQEKTTFTCPYGTFAYKHMPFGLCNAPGTFQRLERML
                     IPCEKLNLVLNWEKCHFMVKEGIVLGHKSSRVGIEVDPAKIDVIHKLPHLTNVKAIRS
                     FLGHAGFYRRFIKDFSKIARPLTKLLEKDIPFDFNDDCVNAFSILKEKLTHAPIMVSP
                     DWALPFELMCDASDVALGAVLGQRKINHFQPIYYASKTLTGA"
     misc_feature    478..762
                     /gene="LOC139841510"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(523..525,529..531,535..537,607..615,739..741)
                     /gene="LOC139841510"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    523..531
                     /gene="LOC139841510"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    523..525
                     /gene="LOC139841510"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(607..618,628..639)
                     /gene="LOC139841510"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1300..1782
                     /gene="LOC139841510"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(1546..1563,1648..1650)
                     /gene="LOC139841510"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    1651..1653
                     /gene="LOC139841510"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    1972..>2172
                     /gene="LOC139841510"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atgggtcgta tcgcacaaat gttatcggag agacaactgg gttcccttcc ggctaatact
       61 caagctaatc cgaatattgg gccaatgaag aacgagcatg tacccaacaa ggacgagccc
      121 gtagttattg aaaaggaaaa agagcctgaa gcttcgacca ctgtaaaagc taaagtgagt
      181 caagaaccac tggcgagggt gtacaaagca ccaattcctt accctcaaag gttgaagaaa
      241 gacaagcttg caagtcaata caagaaattt tcctacatga tcaaacaaat tagcgttaac
      301 atgccattga aggatgtttt gttgggcatg caaaattatg ggaggtttat caaggacctc
      361 atttctgata agggtaaata tgaggaggtg tccaccacat tcctcaatga ggagtgctcg
      421 gctatcttga aaaagcaaaa tacaccccca aagttaggtg acacgggtag ttttcttatc
      481 ccatgcaaga tgggagattc ggtggtgtat gatgcactcg ccgacctggg cgcaagtatt
      541 aacttaatgc cttattcctt atatctcaaa cttggcctag gagagttgac acccactagg
      601 atgggaatta gattagcaga ctgttcatgt agctatccga tcggtaaagc cgaggattta
      661 cccgtgggtg taaattcatt cacctttcct actgattttg ttatcctaga aatggaggag
      721 gatgctaagg taccactcat cttgggtcat cccttcctca acaccgttga tgccattatt
      781 tttgtccaaa agaagcaatt gagcattggt gtcggtgacg agagggttac ctttagtgta
      841 gataaagcca tgaaataccc tagttcatcc gatgattcat gttttaggat tgatgttatt
      901 gataattgtg ttgatgatga cttgcaggaa ctctttggaa ttgatacttc cgatgtcacc
      961 ccattgggtg aaagtgatga gtttcatgtt gagtcggaac tagaagaatt gttgaaggtt
     1021 gttaccgatt ttgaggataa agatgttgaa aattttgatc tcaaggagga ggaaccattt
     1081 gaagaaatca agaatgaaga tcggttatta aatgttctta gggaccataa aagggctata
     1141 gcatggaaga cgaccgatat ttcgggtatt aatccttctt tttgcactca caaaatcctc
     1201 gtggaggatg agtataaacc ggttgttcaa agaaaaagaa ggttaaaccc gaatatgaag
     1261 gaagttgtta agaaggaggt agtcaaatta cttgacgccg ggttgatata ccctatctcc
     1321 gatagcccat gggtgagttc cgtacaagtt gtacccaaaa aagggggtac caccgttgtg
     1381 ctaaatgaaa ggaacgaact tgttccaaca cgtacggtga cagggtggag agtatgcatc
     1441 gattatcgtc gtttaaacga cgccaccagg aaggatcatt tcccgctacc attcattgac
     1501 caaatgcttg aacgtttggc ggggaaggaa ttctattgtt tcctggatgg attttccggg
     1561 tactatcaaa tccccattga ccccaaggat caagagaaaa ctactttcac ttgtccttat
     1621 ggtacatttg catataagca tatgccattc gggttgtgca atgcacccgg cactttccaa
     1681 cgtcttgagc gaatgctcat cccttgcgaa aagttaaacc ttgtcttgaa ttgggagaag
     1741 tgccacttca tggtgaagga aggcattgtt ctcggtcata aaagttctcg tgtggggatt
     1801 gaggtagatc cggctaaaat tgatgttatt cataagcttc ctcatctcac caatgttaaa
     1861 gcaatccgta gttttcttgg tcatgcgggt ttttatcggc ggtttatcaa agatttttcc
     1921 aagattgccc gccccttgac taaactactt gagaaggaca ttccattcga ttttaatgat
     1981 gattgtgtga acgccttttc cattctcaaa gagaagctaa cacacgctcc gattatggtt
     2041 tcacccgatt gggcattacc tttcgagctc atgtgtgatg cgagtgatgt cgccttaggc
     2101 gcggtcttgg gacaaaggaa gatcaatcac ttccaaccaa tttattatgc aagtaagacg
     2161 cttacgggag cttaa
//
LOCUS       XM_071831725             519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841511), mRNA.
ACCESSION   XM_071831725
VERSION     XM_071831725.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..519
                     /gene="LOC139841511"
                     /note="uncharacterized LOC139841511; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841511"
     CDS             1..519
                     /gene="LOC139841511"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687826.1"
                     /db_xref="GeneID:139841511"
                     /translation="MPCGRSEPRSRCPLEQHLFQLVYGKACHLPVEVDHRAYWALKLC
                     NTDLAKAGESRFLQLHELEELRLEAYENSISYKEKTKRWHDARLKGRKEFKEGDRVLM
                     FLSRYKFSPGKLRSRWSGPYVVKRVFPSGYVELIGNDGNNFKVNGHRLKLYYDGVDVT
                     EREDLTFYPKAN"
ORIGIN      
        1 atgccttgtg ggcgttccga accgcgttca agatgcccat tggaacaaca cctttttcaa
       61 ttagtttatg gaaaggcatg ccaccttccg gtcgaagttg atcatagagc ttattgggcg
      121 ctcaagttgt gcaacactga tttagccaaa gcgggtgaat cgaggttttt acaattgcac
      181 gaattagagg agttaagatt agaggcttat gaaaattcca tctcttataa agagaaaact
      241 aagcgatggc acgatgcccg cttgaaaggg agaaaagagt ttaaggaggg tgacagagtg
      301 ttaatgttct tgtcgcgtta caagttttca ccaggaaaac ttaggtcccg atggtcggga
      361 ccgtatgtgg tcaaacgcgt ttttccctcc ggttatgtcg aattgattgg aaatgatggt
      421 aataatttca aggtgaatgg gcaccgattg aagctttatt atgatggtgt cgatgtaacg
      481 gagcgtgagg atctcacgtt ttaccccaag gctaactaa
//
LOCUS       XM_071831726            4563 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides KIN14B-interacting protein
            At4g14310 (LOC139841512), mRNA.
ACCESSION   XM_071831726
VERSION     XM_071831726.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4563
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4563
                     /gene="LOC139841512"
                     /note="KIN14B-interacting protein At4g14310; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841512"
     CDS             1..4563
                     /gene="LOC139841512"
                     /codon_start=1
                     /product="KIN14B-interacting protein At4g14310"
                     /protein_id="XP_071687827.1"
                     /db_xref="GeneID:139841512"
                     /translation="MLHRQQVRDELLHDLSLSGKCRKLIRMSENAFKILCEKLESDGG
                     LRPTQRMSDEEKVARFLFMIGNDLKTSLIAWFFRRSESCTNRHFHKVLNALLSLEDQY
                     IRQPTGDIVPSEIAVKKRFYPFFKNCIGAIDGTHVSVRVPNKDAPRYRGRKGYLTINA
                     LVACTFDLKFTYILSGWEGRYYLVDGGLPLRSSLIAPYRGVRYHLKEYSSHSPENPKE
                     LFNLRHASLRNSIERAFGVLEKRFPIIRSTTEPFYSCETQSDVFLELIMGKSVNDGSS
                     TKRERLEWSTKMDASFIQAMIKEQEDGNRIDGSFTTQAYTNMLNALNTEFPDKGLKKD
                     HLKNRLKSLKDNFSQCYDIFRGVKLSGFGWNSETMLIEVEDEVWDTLIQEKPEAAKWR
                     KKVIHHYESLQLLFSKDRATGTAAATAKERTNQQTKEPITVTIDDIDQYVETNDIGLE
                     NFDTIDEVNPTLTTPPSNGKLPIKSKSKKRKLKKLEEEEDFTSKFLGTMTNVADAIDR
                     STKVMESSHPHVYSEAEIYKELEFMGMEDDDTENAYHFLVDRPEKVRALFECPIHKPH
                     LFPPILKPNLQTPKPTSAALKRLFIQYKFQIAMSAVRRNKETAAAIGGGAVKITTVQS
                     SKTLRSTTPVSDRSNISTGKENINSSRSTSRIRAAAKPQKPLVPLIVKHDRVESRARW
                     STSVPRGRSSSPFEFNRVTSDVRKTRVPRVSGDRNDKIDRIERSVSVGRSTRVSDKDS
                     QQKKGVINSKPSSYNGSVNLKNKVLNLEKKSEVCEESRNKNVTTQISSLKTKCDSDSV
                     MMKVSESVKIFEKFKSKSCVGLRSGNGIENEEKGARLSFGGSSGKASSRGSSLDRLND
                     KGVSEDVLNGRSSGKYPSKLHGKLAFLEEKVKRIASDIKRTKEMLDLNNPDASKLMLS
                     DIQETVAGIEKAMGDVVGGEKDKKGLINVNEKDNVEITVVKQSSPSKELSGAKSSAKG
                     LNTDELEARLFPHHKLLRDRSTLKATSGSKDTLKNAVALVIAETKIDLSESKDVSKVA
                     TGRGGLEICEVQETDSAVGSKSHDNPNTSTVKGDVETTLRADETLDDSDEQENKTFTV
                     FEVEMDDSFNNQLNAIGPKTSTGGWFVSEGESVLLAHDDNSCTFYDIANSEEKSIYKA
                     PFEASPNMWRDCWIVRAPGADGCAGRYVVAASAGNSMDSGFCSWDFYTKEVKSFYIED
                     GITNTRTALAPLPNNVLNRRHYLANLTPENRQWWYKPSGPLIVSTASNQKVVSIYDIR
                     DGEHIMKWELQNCVSAMENTSPLQWRSRVKVVVAEAETVSLWDVGSLAPQPLLSVSSS
                     GKKISALHINNTDAELGGGVRQRVTSAEAEGNDGVFCTSDSINILDFRHPSGIGLKIP
                     KYGTTAHSVFSKGDSIYVGCSGPQSSTRKPTSASQIQQFSIRKQKLISTYTLPESNAH
                     PHYKAITQVWGDSNLTMGVCGLGLFVFDAYKDDGLKPFTSDYGSGQKIKETVGPDNLY
                     CPSFDYLGSRALLISRDRPAFWKYLS"
     misc_feature    394..750
                     /gene="LOC139841512"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
     misc_feature    847..1137
                     /gene="LOC139841512"
                     /note="myb-like, SANT family; Region: GT1; cl23759"
                     /db_xref="CDD:474047"
ORIGIN      
        1 atgttacata gacaacaagt acgagatgag ctattgcacg acctctcgtt aagtggtaaa
       61 tgtcgtaaac ttatccgcat gagtgaaaac gcttttaaga tattgtgtga aaagttagag
      121 agtgacggtg gtcttcgtcc aactcaacgt atgtcagatg aagagaaagt tgctagattt
      181 ttatttatga taggaaatga tttaaaaact agtttaatcg cttggttttt tcgtcgatca
      241 gaatcatgca ccaatagaca ttttcataaa gttttgaatg cactattatc cttagaagat
      301 caatacattc gacaaccaac tggtgatatc gttccgtcag agattgcagt taaaaaaaga
      361 ttttacccat ttttcaagaa ttgtataggg gcaattgatg gaacacatgt cagcgtgaga
      421 gtgcctaaca aagatgctcc gcgatatcgc ggccgtaagg gatatctgac aattaatgca
      481 ctagtagcat gtacgtttga tttaaagttc acgtacattt tgagtggatg ggaaggtaga
      541 tattatttgg tggatggtgg cctacctctt agaagctcac tcatagcacc ttatagaggc
      601 gttagatatc atttgaagga atactcgtct cattcacctg agaatccaaa agaattgttt
      661 aatcttcgtc atgcatcact gcgaaactcg attgaacgtg catttggtgt tttagaaaaa
      721 agattcccta taattagaag tacaacagag ccgttttact catgtgagac acaatccgat
      781 gtgtttttgg aattaattat gggcaaaagt gttaacgatg gaagtagcac gaagagggag
      841 aggttagaat ggtcgacaaa gatggatgct tcttttattc aagctatgat aaaagaacaa
      901 gaagatggta accgaattga tggctcattc accacgcagg catatactaa tatgttgaat
      961 gcgttaaata cggaattccc agataaaggg ttgaaaaaag accatcttaa aaatcgctta
     1021 aaatctctaa aagataactt ctcacaatgc tatgatattt ttcgtggagt taaattaagt
     1081 gggtttggat ggaactctga aaccatgtta attgaagttg aggatgaagt atgggacacg
     1141 ctgatccagg agaaacctga agctgcaaag tggaggaaaa aagtaattca tcactacgaa
     1201 agtttgcaac ttttattttc taaggataga gcaacaggta cagctgctgc aactgcaaaa
     1261 gagagaacta atcaacaaac taaggagcca ataactgtaa ctattgatga tattgaccag
     1321 tatgttgaaa ctaatgacat tggtttagag aacttcgata ctatcgatga agttaaccct
     1381 acattaacca caccaccatc aaatgggaag ctgccaatta aatcgaaaag taagaaaagg
     1441 aagctgaaga agttagagga agaagaagat tttacatcga aattcttggg tacaatgact
     1501 aatgttgctg atgctatcga tcgaagtaca aaggtaatgg agagttctca tccgcacgtt
     1561 tattcagagg cagaaatcta taaagaacta gagtttatgg gtatggaaga tgatgatact
     1621 gaaaatgcat accatttttt ggttgatcgt cctgaaaaag tgcgagctct atttgaatgt
     1681 cctattcata agcctcatct tttcccgcct atcctcaaac caaatctaca aactccaaaa
     1741 ccaacatctg ctgccttaaa aagattattt atccaataca aatttcaaat cgcaatgtcc
     1801 gccgtacgcc ggaacaaaga aaccgccgcc gccatcggcg gtggcgcagt taaaatcacc
     1861 accgtccaat catcaaaaac actcagaagc acaactccag tttccgatcg aagcaatatc
     1921 tccaccggaa aagaaaacat taacagttcc agatccacgt ctcgtattcg agctgcagca
     1981 aagccacaga aaccgctcgt gccactgatt gttaaacatg atcgagtcga gtcgcgtgcg
     2041 aggtggtcaa cgagtgtgcc gagaggtagg agctctagtc cttttgaatt taatagagtt
     2101 acatctgatg tacgtaaaac tagggttcct agggtttcag gtgataggaa tgataaaatt
     2161 gatagaattg aaagaagtgt tagtgttggt agatcaacta gggtttcaga taaggatagt
     2221 cagcagaaga aaggggttat taattctaaa cctagttctt ataatggaag tgtgaatttg
     2281 aaaaataaag ttttgaattt ggagaagaaa agtgaagttt gtgaggaatc taggaataaa
     2341 aatgtaacaa cacaaattag tagcttgaaa acaaagtgtg attcggattc tgttatgatg
     2401 aaagtttctg aaagtgttaa gatatttgag aagttcaagt cgaagtcttg tgtagggttg
     2461 aggtcgggaa atgggattga aaatgaagag aaaggtgctc ggttgagttt tggtggttca
     2521 agtgggaagg cgtcgagtag agggagtagt ttggataggt tgaatgataa gggagtaagt
     2581 gaagatgttt tgaatgggag atcgagtggt aagtatccga gtaaactaca tgggaagctt
     2641 gcgtttttgg aagaaaaggt gaagaggata gcatcggata ttaagaggac taaggagatg
     2701 cttgatttga acaatcctga tgcttcaaaa ctgatgcttt ctgatattca ggaaacggtt
     2761 gcaggaattg agaaggcgat gggtgatgtt gttggtggtg agaaagataa gaaaggttta
     2821 atcaatgtaa atgaaaaaga taatgttgag attactgtag tgaaacagag tagtccttct
     2881 aaggagttga gcggtgcaaa aagttcagct aagggattga ataccgatga gctagaagca
     2941 agattatttc ctcaccataa gcttcttaga gacaggtcaa cactaaaagc aacttctgga
     3001 agcaaagata cactgaaaaa tgcggttgct ttagttattg cagagacaaa aattgactta
     3061 tcggagagta aggatgtgtc taaagttgca accgggagag gtggtttgga gatatgtgaa
     3121 gttcaagaaa ctgacagtgc agtaggctca aaatcacatg ataatccaaa tactagtact
     3181 gtaaaaggtg atgttgagac aactctcaga gctgatgaaa cacttgatga ttctgatgag
     3241 caagaaaata agacattcac cgtttttgag gtggagatgg atgatagttt caataatcag
     3301 ttaaatgcga ttgggcccaa gacctctact ggtggctggt ttgtgtctga gggagagtcg
     3361 gttctgcttg ctcatgatga taattcgtgc accttttatg atatcgccaa ctctgaggag
     3421 aaatccatat acaaggctcc atttgaagcc tcacctaata tgtggagaga ttgttggata
     3481 gtacgtgcac ctggggcaga cggttgcgct ggacgatatg tagtggctgc atctgctggt
     3541 aatagcatgg attcaggttt ttgctcatgg gacttttaca ccaaagaagt aaaatcattt
     3601 tatattgaag atggaattac taatacaaga acagcattgg ctccattacc caacaatgtt
     3661 ttgaacagac gacactattt ggctaatttg actcctgaaa acagacaatg gtggtacaaa
     3721 cctagtggcc cacttattgt ttcaacagca agtaatcaga aagttgtgag tatatacgat
     3781 attcgtgatg gagagcacat tatgaagtgg gagttgcaga actgtgtttc agcaatggaa
     3841 aacacgagtc ctttgcaatg gaggtcccgg gtgaaggtgg ttgtggctga ggcagaaact
     3901 gtttctttgt gggatgtggg gtctctcgcc cctcaaccgt tactatcggt ttcttctagt
     3961 ggtaaaaaaa tttcagcact tcatattaat aacactgatg ctgagcttgg tggaggtgtt
     4021 cgtcaaaggg tgacctcagc agaagcagaa gggaacgatg gcgtattctg cacatcagat
     4081 tcaataaata tactagattt tcgtcaccca tctgggattg gtctcaagat tccaaaatac
     4141 ggcaccacgg cccactcagt tttctccaag ggcgactcaa tctatgtcgg ctgcagtggc
     4201 ccacaatcat cgactagaaa accaacatcg gcctcccaaa tccaacaatt ctccattcgc
     4261 aagcaaaagc taatcagcac ttacacttta cctgaatcta atgctcaccc acattataaa
     4321 gctataacac aagtatgggg tgactcaaat ttaaccatgg gtgtatgcgg gttaggattg
     4381 tttgtatttg atgcatataa ggatgatggc ttgaaaccat ttacaagtga ttatggaagt
     4441 ggtcaaaaga ttaaagagac cgttgggccg gataacttat attgtccttc gtttgactat
     4501 ttaggatcgc gagctttact tatatcaaga gaccgccctg cattttggaa gtacttgtct
     4561 tag
//
LOCUS       XM_071831727            1842 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841513), mRNA.
ACCESSION   XM_071831727
VERSION     XM_071831727.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1842
                     /gene="LOC139841513"
                     /note="uncharacterized LOC139841513; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139841513"
     CDS             1..1842
                     /gene="LOC139841513"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687828.1"
                     /db_xref="GeneID:139841513"
                     /translation="MAYQVSAVRPSHAVAWGVDIISSPRATTDYDVIVEPRGEVPKRL
                     NKLHPRYMSSQFPLMFVYGEPGFHLGLMLQDVPGSPAGREIKMTMNMYYSYQIHDRLG
                     VYSLMLRMGRLFQKYVVTVYCSIELNRMDYIRHKQNDIRNEYLSGLYDAIDRGTKPVQ
                     MLVAGQYSLLHLPIARYLQPYTLLTPSDRADVVARVFLLRVGEFVAFLKEEQPFGVFR
                     GVLYTIEFQKRGLQHCHTLLWVHSPPLSLINQHIDDYISAELPDPRTDPVGYAVICAT
                     MMHGPCGLAKPSAPCMELSACSKKFPKLYNSKTYFDADGCAHYRRRNTGIYTTRGGVK
                     LDNSYVVPYNLLLCLTFHTHINVEFCGWTMLIKYLFKYISKGTDRVADRITRPVGNTD
                     GQQSQVPKPIDEIQNFIDARFICLHEACWCIFNFPIHHREPAVQILGVHLENMQLLTF
                     HACEPLEFIVQTNPMKKTTLTQWLHYNASFSAGHHLTYLDFPLEFVWYDGNKCWKQRA
                     NLKKPCIRRLTYIHPAFEEAFFLRMLLCHQKGCKSFADIRTVNNIVHSTYRSACEAIG
                     LFGDDKEWSTALEEASVSASSSELRSLFANILMYCSVTNPLNLWEKH"
     misc_feature    319..714
                     /gene="LOC139841513"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atggcgtacc aggtttcagc tgtcagacct tctcatgcgg tcgcatgggg tgttgacatt
       61 atcagtagcc ctcgagctac cactgattac gatgtgattg ttgaaccgag gggtgaagta
      121 ccaaagcgtc ttaacaagct tcacccccgg tacatgtcgt cgcagttccc tttgatgttc
      181 gtttatggtg agccagggtt ccatcttggt ttgatgttgc aggatgttcc tggttcgcca
      241 gctgggcgtg aaataaaaat gactatgaac atgtactaca gctatcaaat tcatgatagg
      301 cttggtgtat acagcttgat gcttagaatg gggcgactct tccaaaagta tgtagttacg
      361 gtttattgta gcattgaatt aaatcgtatg gattacatac gtcataagca aaatgatata
      421 cgaaatgaat atctttccgg tttgtatgat gccattgata gggggaccaa accggtgcag
      481 atgttggtag caggacaata ctccctgctt catttaccga tcgctcggta tttgcaacca
      541 tacacactcc ttactccctc ggatcgggca gatgttgttg ctcgtgtatt cctcttaaga
      601 gtcggagagt ttgtcgcatt cttaaaagaa gaacaacctt ttggtgtatt cagaggagtc
      661 ctctatacga tagagtttca gaagcgagga ttgcagcatt gtcatacgtt attgtgggtt
      721 cattcacctc cattgtctct tataaatcag cacatagacg attacatatc agccgagtta
      781 cccgatccta gaactgatcc agttggctat gcagttatct gtgcaactat gatgcacggt
      841 ccttgtggcc tggcaaagcc aagtgcacca tgcatggaac tatctgcttg ctcaaagaag
      901 ttccctaaat tatataatag caaaacttat tttgacgctg atggatgtgc tcactatcgg
      961 cggcgtaaca ctgggattta taccaccaga ggcggggtga agctcgataa tagttacgtt
     1021 gtcccctaca atctgcttct atgtctaact tttcatactc atataaatgt tgagttttgt
     1081 ggttggacaa tgctcatcaa gtatctgttt aagtacattt caaaaggaac cgatcgtgtt
     1141 gctgatcgca taacaaggcc agtgggcaat accgatggtc aacaatcaca ggttcccaag
     1201 cccattgacg aaattcagaa tttcattgac gcccgcttta tttgccttca tgaagcttgc
     1261 tggtgtatat ttaatttccc gattcatcat cgtgagccag cagttcagat tcttggcgta
     1321 catttagaaa atatgcaact gctgacattt cacgcctgtg agccgcttga attcattgtt
     1381 caaacgaacc caatgaagaa gacgacgctc actcaatggc tgcattataa tgcttctttt
     1441 agtgcaggcc accatctaac ttacctagat tttcctctgg agtttgtttg gtatgatgga
     1501 aacaagtgtt ggaaacaaag ggcaaacttg aagaagcctt gtattagaag gttaacgtat
     1561 atacatccgg catttgagga ggcttttttc ttgagaatgc tcctttgcca tcaaaagggc
     1621 tgcaaaagct tcgcagatat tagaacagtc aataatattg ttcattctac atatcgatcg
     1681 gcatgtgagg ctattggctt attcggtgat gataaagaat ggtcaactgc tcttgaagag
     1741 gcttctgtat ctgcgtcttc gtccgagctc cgctcacttt tcgcaaacat tttgatgtac
     1801 tgttcggtaa caaacccatt aaatctatgg gaaaaacact ga
//
LOCUS       XM_071831728            1083 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein unc-13 homolog
            (LOC139841514), mRNA.
ACCESSION   XM_071831728
VERSION     XM_071831728.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1083
                     /gene="LOC139841514"
                     /note="protein unc-13 homolog; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841514"
     CDS             1..1083
                     /gene="LOC139841514"
                     /codon_start=1
                     /product="protein unc-13 homolog"
                     /protein_id="XP_071687829.1"
                     /db_xref="GeneID:139841514"
                     /translation="MAVYIRIHQCIFHGHDRDMCMDKFNCWVKFENDLLCATLTMLSE
                     VASDAKKVKRDPIYANMLSAMLNSIKKSVIAIENYDECSTFTKKVDHYIRSSLRSAFA
                     KMLDNGNSINESITLQEKKEKLIQIAKGTEELALREQSMFSSVLKKWHPISAGIAAVT
                     LHTCYGNLLKKFITKNSTICSETLAVLQQADKLEKVLVNMVVEDYVACKDIAKPVVRE
                     MVRYDVDSIVLRLLRQWIQESLKTTKDVVHTAKETETWNPTSKSEPYAHSALELTRQT
                     KDAIDTFFKIPIGVSEDLIREFANAIEDILHDYINFVASCGSKQSYVPTLPHLTRCGC
                     DSTFIKLWRMAATPPCSVANPSEVGF"
ORIGIN      
        1 atggcggttt atataagaat tcatcaatgc atttttcatg gacacgatcg tgacatgtgt
       61 atggacaagt ttaactgttg ggtcaagttt gaaaatgatc tgctttgcgc tacattaact
      121 atgctaagtg aggtcgctag tgatgcaaag aaagtcaaac gagatcctat atacgcaaat
      181 atgctatcag caatgttgaa ttcgataaaa aaaagtgtca ttgccattga aaattacgac
      241 gaatgttcta ctttcacaaa gaaggttgat cattatattc gttcttcttt aaggagcgct
      301 tttgcaaaga tgttggataa cggaaactcg ataaatgagt ccataacatt acaagaaaaa
      361 aaagaaaaac taatccaaat tgcaaaagga accgaggaat tggctctgag agagcaaagc
      421 atgtttagct cggttttaaa gaaatggcat ccgatttcag ctggcattgc agctgtaaca
      481 ctgcacacat gctatggaaa tttgttgaag aaattcataa cgaaaaactc cacaatttgc
      541 agtgagacac ttgctgttct tcaacaggcc gacaagctcg aaaaagtatt ggttaatatg
      601 gtggttgaag actatgtagc atgcaaggat attgctaaac ccgttgtaag ggagatggtt
      661 cgttatgatg ttgattcaat cgttttaagg cttttgagac aatggattca agaaagcttg
      721 aagactacca aagatgtggt tcatacagcc aaagaaaccg agacatggaa ccctacatca
      781 aaaagcgagc cttatgcaca ttcagctctc gagctaacga ggcaaaccaa agatgctatc
      841 gacaccttct ttaagatccc aatcggagtt tctgaagatt tgattcggga attcgctaat
      901 gcaatcgagg atattctaca tgactatatt aactttgttg cgtcatgtgg ttcaaaacaa
      961 agctatgttc ccacactacc tcatctaaca cgatgtgggt gtgactcgac gtttatcaaa
     1021 ctatggagaa tggcagcgac accaccgtgt agtgtcgcta acccaagtga ggttggcttt
     1081 tag
//
LOCUS       XM_071831729            2022 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841516), mRNA.
ACCESSION   XM_071831729
VERSION     XM_071831729.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2022
                     /gene="LOC139841516"
                     /note="uncharacterized LOC139841516; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841516"
     CDS             1..2022
                     /gene="LOC139841516"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687830.1"
                     /db_xref="GeneID:139841516"
                     /translation="MSDEKKIDGNLSETIPIAARLTDNKLNGSNFFEWSKTIRVYLRS
                     MGKDSHLTSEPPKDDTRDLWLQNDVRLFLQIMNSIESSVTSLVNHCEYVKELMEYLDF
                     LYSGKSNISRIFNVCKSFHRGEQHDRSLMAYVMEFKKIYKEFNSVMPLSADIKTMQTQ
                     REQITVMSFLTGLRPEHDAIKSQFLNESTIPSLQEMFARVLHHEDVKKPQGSEHNTAL
                     VSRGGFRGGGRSRGGYQGSYRGSSRGGHTDRITEEPTNSIVECFYCHELGHTKRYYKK
                     LQTQIMRNNLSAHAASSSTVTISANVHAEYTQLKESTKPTTSIVAFVETGNDTCLLSS
                     ASKWVIDSGASDHMTGNNHLYSDFNTHSSYVTIANGTTSPVLGSGTINLTPSISLSSV
                     LCLPNFSFNLLSVSKLTRDLNCVALLFPDSCIFQDLLTKQIIGKGRVSDGLYILETTT
                     KIPRSLVCSKSSSPLMMHCRLGHPSLQNLKKLCSEFSGLSSLYCESCQFAKHQRVHLS
                     PRVNKRAASPFELVHSDVWGPDVMRGKRKCTYPIASFVSYDKLSVSSRAFVATLDSVS
                     IPKTVGEALAHSGWRAAMIEEMNALDHNGTWALVNLPVSKKAIGCKWVFTVKVNPDGS
                     LARLKASLVAKGYAQTYGVDYSETFSPVAKLTSIRLFISLAATYQWTLH"
     misc_feature    223..624
                     /gene="LOC139841516"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    1324..1506
                     /gene="LOC139841516"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1780..>2019
                     /gene="LOC139841516"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgagtgatg aaaagaaaat agatggtaat ttaagcgaga ctattcctat tgcagctcgc
       61 ttaaccgaca ataaacttaa tgggtctaac ttctttgaat ggagtaagac aatccgtgta
      121 tatcttagga gcatgggaaa agattctcat cttacttccg aacctcctaa agatgataca
      181 cgagatctgt ggctacaaaa tgatgtcaga ctctttcttc aaattatgaa ttcaattgaa
      241 tcttcggtta cttctttggt aaatcattgt gaatatgtca aagagcttat ggagtatctc
      301 gattttctat attctggaaa gagcaatatc tctagaatat ttaatgtgtg caaatctttt
      361 catcgtggtg aacaacatga tcgatcttta atggcttatg ttatggaatt taagaaaata
      421 tataaggagt ttaattctgt gatgcctttg agtgctgata ttaaaactat gcagacacaa
      481 cgggagcaaa taacggtcat gagctttcta actggtttac gaccagaaca tgatgctatt
      541 aagtcccagt ttttgaacga gtctacaatt ccctctcttc aagaaatgtt tgctcgtgtc
      601 ctccatcacg aggatgttaa aaaacctcaa ggttctgagc acaacactgc tcttgtcagt
      661 cgtggaggat ttagaggagg aggaaggtct cgtggaggct atcaaggaag ttatcgagga
      721 agttcaagag gaggccatac tgatagaata acggaagaac ccactaattc tattgtggag
      781 tgtttttatt gtcatgaact tggacatact aaacgatatt acaagaaatt gcaaactcaa
      841 attatgagga ataatctctc agcacatgct gcatcttcct ccacagtcac tatctctgcc
      901 aacgtgcatg ctgaatatac acaattgaaa gaatctacga aacctactac ttcaattgtt
      961 gcctttgtcg aaacaggtaa tgacacgtgt ctcttatcat cagcctccaa atgggtcatt
     1021 gattctggtg cctcagatca tatgacaggt aataaccatc tttactctga ctttaatacc
     1081 cactcatctt atgtcacaat tgcaaatggt accacctctc ctgttcttgg atccggcact
     1141 atcaacctca ctccatctat atctttatca tccgttttat gtctacccaa tttctcattt
     1201 aacctgctat ctgtcagcaa acttactcgt gacttaaatt gtgtagcctt actgtttcct
     1261 gactcttgta tctttcagga tctcttgacg aaacagatta ttggtaaagg acgggtatct
     1321 gatggacttt acatacttga aactacaaca aaaattcccc ggtcattagt atgctcaaag
     1381 tcatcctctc ctcttatgat gcattgtcgg ttaggtcatc cttctttaca gaatttgaag
     1441 aaactatgtt ctgagttttc cggtttatcc tctttatatt gtgagtcttg tcagttcgct
     1501 aagcatcagc gagtccactt aagtcctaga gtcaataagc gagcggcgtc tccatttgaa
     1561 ttagtacatt ctgatgtttg gggtcctgat gttatgcgag gtaaacgtaa gtgtacttat
     1621 cctattgctt cctttgtctc ttatgataaa ttgtccgtct cttctcgtgc ttttgttgcc
     1681 actttagact ctgtctccat tccaaaaact gttggtgaag ctttggctca ttctggatgg
     1741 cgtgctgcta tgattgagga aatgaatgca ctcgatcata atggcacttg ggcattagtt
     1801 aacttacctg tttctaaaaa ggcaattggt tgtaagtggg tcttcacggt aaaggttaat
     1861 cctgatggtt ctttagcacg attgaaagct agtttagttg ctaagggata tgctcaaaca
     1921 tatggggtgg attattctga gaccttttct cctgttgcta aactcacatc tatcagatta
     1981 ttcatttctt tagctgctac atatcaatgg acacttcact aa
//
LOCUS       XM_071831730             339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841517), mRNA.
ACCESSION   XM_071831730
VERSION     XM_071831730.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..339
                     /gene="LOC139841517"
                     /note="uncharacterized LOC139841517; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841517"
     CDS             1..339
                     /gene="LOC139841517"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687831.1"
                     /db_xref="GeneID:139841517"
                     /translation="MEKDSWMFNLHANGLFSSSALTHLIDEKILPKPSNASETMWNNF
                     LPQKIGIFIWRSLMKRIPVLVELDKRGIDLDSVRCLVCDNDVKTVEHILLNCEFAKDL
                     WESVPLLEPS"
     misc_feature    <118..306
                     /gene="LOC139841517"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaaaagg atagctggat gtttaacctg catgcaaacg ggcttttctc gtcctctgct
       61 cttacccatt tgattgacga aaagatacta cccaaaccat caaatgctag cgaaactatg
      121 tggaataatt ttctaccaca aaagatcgga atcttcattt ggcgttcatt gatgaagaga
      181 atacccgttc ttgttgagct cgacaagcgt ggcatcgatc tcgactcagt gagatgtctc
      241 gtttgcgata atgatgtcaa aacggtggaa cacatccttc ttaactgtga gttcgcaaag
      301 gatctgtggg agagtgtacc gttactggag cctagttaa
//
LOCUS       XM_071831731             657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841518), mRNA.
ACCESSION   XM_071831731
VERSION     XM_071831731.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..657
                     /gene="LOC139841518"
                     /note="uncharacterized LOC139841518; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841518"
     CDS             1..657
                     /gene="LOC139841518"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687832.1"
                     /db_xref="GeneID:139841518"
                     /translation="MSAVVQLTPLNLLTIDLNGAVVRVKVFVTWKKTYFNNPNSTMSL
                     EMILIDAQVIEQSYFFGNKIRASVPKRWVSFYEPTFVEGKYLELSNFGVVDCDDKVKL
                     IPNALKISIFRSTTINVCHLFEIATEGYSPVHFQELLEWRFSKDAVFDVLGALVEMKP
                     MCIKRENGVDNKSLEFTLKDNRCALWAHHATRVFEYVSARKNDIDSIVLLMHNCKLKE
                     "
     misc_feature    64..351
                     /gene="LOC139841518"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(76..84,133..144,148..150,193..201,205..207,250..252,
                     274..282,322..330)
                     /gene="LOC139841518"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
     misc_feature    order(253..255,259..261,265..267,346..348)
                     /gene="LOC139841518"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239926"
     misc_feature    448..>609
                     /gene="LOC139841518"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
ORIGIN      
        1 atgtctgcag ttgttcaact tactcctttg aacttattga caattgattt gaatggtgct
       61 gttgttaggg ttaaggtttt tgtaacatgg aaaaaaacct atttcaataa ccctaactca
      121 acaatgtcac tggagatgat tctaatcgat gctcaggtta ttgaacaatc atattttttt
      181 ggtaataaaa ttcgagcttc tgtaccgaag aggtgggttt cgttttatga accgactttt
      241 gttgagggca aatacctgga attgtccaac tttggagttg tggactgtga tgacaaggtg
      301 aagttaatac ctaatgctct taagataagc atctttagat cgactactat taatgtgtgt
      361 catttattcg agattgcaac cgaggggtac agcccggttc attttcaaga gctgttggag
      421 tggagatttt caaaggatgc agtgtttgat gttcttggtg cattggttga aatgaaacca
      481 atgtgtatca aacgtgagaa tggagttgat aacaagtctt tggagtttac tctgaaagat
      541 aacaggtgtg ccttatgggc tcaccatgca actcgagttt ttgagtacgt gtctgctaga
      601 aagaatgata tcgactccat cgttctactt atgcacaatt gtaaattaaa agaatga
//
LOCUS       XM_071831732             996 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 47 (LOC139841519), mRNA.
ACCESSION   XM_071831732
VERSION     XM_071831732.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..996
                     /gene="LOC139841519"
                     /note="probable protein phosphatase 2C 47; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139841519"
     CDS             1..996
                     /gene="LOC139841519"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 47"
                     /protein_id="XP_071687833.1"
                     /db_xref="GeneID:139841519"
                     /translation="MASDKNNSLLCSINLDLCFSNANSVSIIENLATNSASIKNSKVG
                     SKFSPCIRSGSHTDVGGRRQNEDEHIQIDDLSNHLGDKYKWPRASSFYAIFDGHGGSE
                     AASYVKDYAMKLFFNESNLPQADLVDDSLIKDLQDYHRKAFLQADQALAEECTISDYC
                     GTTTLSILILERHLIIANVGDSRAVVSRKGVAIQMSNDHRPSYLQEKERVEKLGGYFE
                     DGYLNGELGVTRALGDWYLKSPDGLGSVLIAEPEMRHMELSEDDEFMIIGCDGIWDVM
                     SNEEAVGIVRRELLKTNDPQECVMEIINEALSRHAIDNLTAIVVCFTSHIEPPKA"
     misc_feature    97..987
                     /gene="LOC139841519"
                     /note="Protein phosphatase 2c; Provisional; Region:
                     PLN03145"
                     /db_xref="CDD:215603"
ORIGIN      
        1 atggcgagcg acaaaaacaa cagtttatta tgctccataa atttggattt atgcttttcc
       61 aacgccaact ctgtttcgat tatcgaaaat ttggccacga attcagctag catcaaaaat
      121 agcaaagtgg gttcgaagtt cagtccgtgc atacggtcag gaagtcacac agacgttgga
      181 ggacgcagac aaaacgaaga tgaacacatc caaatcgatg atctatctaa ccatcttggt
      241 gataaataca agtggcctcg cgcgagttcc ttttatgcaa tctttgatgg tcatggagga
      301 tcagaagcag cctcatatgt caaagattat gccatgaaat tattcttcaa tgagtctaat
      361 ttacctcaag cagatcttgt agatgactcg ctaataaaag atttacaaga ttatcatcgc
      421 aaagcgtttt tacaagctga ccaagctcta gctgaggaat gcactatcag cgactattgt
      481 gggaccacga ctttaagcat tttaatactc gaacgacatc taataatagc aaacgttggt
      541 gactctcgtg cggttgtttc tagaaaaggc gttgcaattc aaatgtctaa tgaccatagg
      601 ccatcttatt tacaagaaaa ggaaagagtg gagaaactag gcggttactt tgaggacgga
      661 tacttgaatg gtgaacttgg tgtaactcga gcgcttggag attggtattt gaagtcgccg
      721 gatggtttag gctcagtttt gattgctgaa ccggagatga gacatatgga attgagtgaa
      781 gacgatgagt ttatgataat tggttgtgat gggatttggg atgtgatgtc gaatgaagaa
      841 gctgtgggga ttgtacgtcg tgaattattg aagactaatg accctcaaga gtgtgttatg
      901 gagatcatta atgaagcatt aagtcgtcat gcgattgata atctcactgc gattgtggtt
      961 tgctttactt ctcacattga gccgcctaag gcttga
//
LOCUS       XM_071831733             853 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 26S proteasome regulatory
            subunit 4 homolog (LOC139841520), mRNA.
ACCESSION   XM_071831733
VERSION     XM_071831733.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..853
                     /gene="LOC139841520"
                     /note="26S proteasome regulatory subunit 4 homolog;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139841520"
     CDS             311..853
                     /gene="LOC139841520"
                     /codon_start=1
                     /product="26S proteasome regulatory subunit 4 homolog"
                     /protein_id="XP_071687834.1"
                     /db_xref="GeneID:139841520"
                     /translation="MLTLVVNVRIQRPMLELMYQFGFRFTWFKVILATNKIESLDPPL
                     IRPGRIDGKIEFPLPDIKTRRKIFMLMMSTWKNLLWPKTSSRELTKAICTEAGLLALR
                     ERLMKMTHADIKKAKDKVMFKKKEGVPGLYMRKRKRPLPTSIVLDLPSGSPSRASFAI
                     FCLSLALEFQKLLRVVHLIE"
     misc_feature    <338..709
                     /gene="LOC139841520"
                     /note="26 proteosome regulatory subunit 4-like protein;
                     Provisional; Region: PTZ00361"
                     /db_xref="CDD:185575"
ORIGIN      
        1 tcattcatgt cagtttgatc gactgttggg tttatgcaat aagggctaaa tcattcgaaa
       61 attagtcgct gtgaaaatga ttttcagcag gctgacatat aaactgaaaa gggtcaaaca
      121 tggatgtaga catcaagata ccaaatgcca tttagtccgt acatagccga tgaagagata
      181 tgagtttgtt taaaggagga tttgtgatgc actatactga agattctttg agattcggtc
      241 aagttagggc aaaaatgtga aaattggtga aaagcataag cctttaatct catatgcacc
      301 aaattgtacg atgctcactc tggtggtgaa cgtgaggatt cagagaccca tgttggagtt
      361 aatgtaccag tttggttttc gattcacatg gtttaaagtg atcttggcca ctaacaaaat
      421 tgaaagcctt gacccaccgt tgatccgacc tggtcgtatt gatggaaaga tagagtttcc
      481 acttcccgac attaaaacca ggaggaaaat tttcatgcta atgatgtcaa cttggaagaa
      541 tttgttatgg ccaaagacaa gttctcggga gctgacaaag gctatatgta ctgaggctgg
      601 attgcttgct ttacgagaac gcctgatgaa gatgacgcat gctgatatca agaaggcaaa
      661 ggacaaagtt atgttcaaga agaaagaggg tgtaccagga ctttatatga gaaaacgtaa
      721 aagaccatta ccaacgagta tcgtcctgga cttgccatca ggctcgccct cgagggcgtc
      781 gtttgcaatt ttttgtctta gcctcgccct cgaattccaa aagctactcc gtgttgtaca
      841 tttgatcgaa tga
//
LOCUS       XM_071831734             705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841521), mRNA.
ACCESSION   XM_071831734
VERSION     XM_071831734.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..705
                     /gene="LOC139841521"
                     /note="uncharacterized LOC139841521; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841521"
     CDS             1..705
                     /gene="LOC139841521"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687835.1"
                     /db_xref="GeneID:139841521"
                     /translation="MVTPSLSSSSHVFRDMFNVVHIDEKWFYLSRSSKRYYLVPGENE
                     PLRACKSKKFITKVIFLAAVARPRYDTSGNEVFSGKIGIFPLTPLEPAKRSSKNRVAG
                     TMETKPILSVTKDVTRAWLIEKVLPAIRAKWPQGHSGPIFIQQDNAKPHISVNDSEFL
                     EASSQEGFDIRLRFQPPNSPDLNVLDLEILKVRGGNEYRIPHIGKGRLEREGNLPPQI
                     ECDQNLIDEMHFVTEM"
     misc_feature    <331..549
                     /gene="LOC139841521"
                     /note="IS630 family transposase; Region: transpos_IS630;
                     NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 atggtaactc cttctttgtc aagttcaagt cacgtatttc gtgatatgtt taatgttgta
       61 cacattgatg agaaatggtt ttacttgtca agatcgtcaa agcgttatta tcttgttccc
      121 ggcgagaatg agccgttaag agcatgtaaa agtaaaaaat tcatcactaa agtgatcttt
      181 ctagccgccg ttgcacgacc aagatacgat acatcgggta atgaagtttt ctcaggaaag
      241 attggcatat tcccgcttac cccgttagaa cccgctaagc gttcaagcaa gaaccgagtt
      301 gcaggaacaa tggaaacaaa gccgatatta tcggtgacta aagacgttac tcgagcatgg
      361 ttgatagaga aggttctacc ggcgattcga gctaaatggc cacaaggtca ttcgggtcca
      421 atattcattc aacaagataa tgcaaagcct catattagtg taaacgatag tgagtttctt
      481 gaagcatcat ctcaagaggg atttgatatc cgacttcgtt tccaaccacc aaatagtccc
      541 gatttaaatg tgttggacct tgaaatattg aaagttcgcg gtggcaacga gtatcgtata
      601 ccacatattg gtaagggtag attagaaaga gaaggtaact tgccaccgca aattgagtgt
      661 gatcaaaacc tcatagatga gatgcatttt gtcactgaaa tgtag
//
LOCUS       XM_071831735             888 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides LRR receptor kinase
            SERK2-like (LOC139841523), mRNA.
ACCESSION   XM_071831735
VERSION     XM_071831735.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..888
                     /gene="LOC139841523"
                     /note="LRR receptor kinase SERK2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841523"
     CDS             1..888
                     /gene="LOC139841523"
                     /codon_start=1
                     /product="LRR receptor kinase SERK2-like"
                     /protein_id="XP_071687836.1"
                     /db_xref="GeneID:139841523"
                     /translation="MGWIIYTQRIAGTDVYLDPEYSKTGKLKKQSDIYSFGVVLFEIF
                     SGTLAHEKFYTDENNKGLAAVARKRFSEGTLMEIVDPKVMEEAEERCFGLKVGANRES
                     LEAFLNIAIQCLAETQVERPKLTDITKELEIALNLQEKRKDILKFSLEGIQLGTENFS
                     EKNFIKKEGFGMLYRGEVPNDIGCKVPVILKVTKSSEENNFLRELEILFGHKHENIIG
                     VVGYCKEKDDKIIVYENAYNLNTLNSQVNDVSLTWIKRLEICVGIANGLKFLHKGFAR
                     QQSVVHRDIKSVNIVLNED"
     misc_feature    <19..396
                     /gene="LOC139841523"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    493..>885
                     /gene="LOC139841523"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(493..504,511..513,517..519,565..567,571..573,
                     649..651,697..708,850..852,862..867,871..873)
                     /gene="LOC139841523"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgggttgga ttatctacac acaaagaatt gcaggcactg atgtgtactt ggatcctgaa
       61 tattcaaaga cgggtaaatt aaaaaagcaa tcagacatat actcattcgg agttgtttta
      121 ttcgaaatat tctctggaac attggcccat gaaaagtttt acaccgacga aaataacaag
      181 ggacttgcag cagtagcacg gaagcgtttc tccgagggaa cactaatgga aatagtagac
      241 ccaaaagtaa tggaagaagc tgaggaacgc tgttttggtc taaaggtagg agctaatcga
      301 gagtctctgg aagcattttt aaatattgca attcaatgtt tagcagaaac tcaagtggag
      361 cgaccaaaac tgacagatat cactaaggaa cttgaaattg cattaaacct tcaagaaaag
      421 cgcaaggaca ttcttaaatt ttcacttgag ggcatacaat tgggcaccga aaactttagt
      481 gaaaaaaatt tcatcaaaaa ggaaggattt gggatgttat atcgagggga agttccaaat
      541 gacattggat gtaaagttcc agtcatttta aaggtcacca aatcttcaga agaaaataat
      601 tttctaagag agcttgaaat cctcttcggg cataaacatg aaaatattat cggcgttgtt
      661 ggttattgca aggaaaagga tgataaaatt atcgtttatg aaaatgcata taacctaaat
      721 actctcaata gccaagtgaa tgatgttagt cttacatgga taaaaagact tgagatatgc
      781 gtaggcattg caaatgggtt aaaatttctt cataaaggtt ttgcaagaca acaatcggtt
      841 gtacatagag acattaaaag tgttaatatc gtactaaatg aagattga
//
LOCUS       XM_071831736            1869 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841524), mRNA.
ACCESSION   XM_071831736
VERSION     XM_071831736.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1869
                     /gene="LOC139841524"
                     /note="uncharacterized LOC139841524; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841524"
     CDS             1..1869
                     /gene="LOC139841524"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687837.1"
                     /db_xref="GeneID:139841524"
                     /translation="MDTNWMSSLRNSSTYKKGLDKFIDYIFKKEGVNGEIACPCNKCV
                     NLKWVGWYDARTHLLCDGFFKGYTIKTPISEPCDIPMEDAEDDMIGLVSDTHHWFDDN
                     ILETEDHSLPNKSAKKFYKGLESAKQALYPGCKKFSVLSFIVRLFHSKCIGKCNDKGF
                     SMIIDTLKDAFPEVAIPKSLYDLRKLIRDLGLGYERIDACPNDCMLYWKENKDKTECV
                     VCHTSWYKTSEDNSDDEENLTANDHNKVPTKVLRYFPLIPHLQRLYMSFEAAASMRWH
                     EEGRTKDGLLRHPADSPAWQTFDHNYPEFAKESRNVRLGLASDGFNPFGNMSNSHRPS
                     APGNNIDVYLEPPVDELKLLWDHGVETYDSSTNSNFQMRAGMVWTISDFPAYANLSGW
                     STKGKLACPSYHKHTKSIRLKRSRKFVFMGYHRFLSKRHAYRKDKNSFDGTEELESKP
                     TCLTGSDVLNELNGIEFKFGKLVKDNPVLPYNWKKRSIFFKLPYWKDNLIRHNLDVMH
                     IEKNVCDSVIGTLMNLDGKTKDHLNGRYDLEEMEIRKELHPEVLENNKVYLPPACFSM
                     NKKEKDRFCRMLKAVKVPDGYSANISRCVQLNPPKIGGLKSHDNHILMQQLLPICI"
     misc_feature    13..204
                     /gene="LOC139841524"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    847..1389
                     /gene="LOC139841524"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atggacacaa attggatgtc tagcctgaga aattcgtcta catataagaa aggtcttgat
       61 aagtttattg attatatatt taaaaaggag ggtgtaaatg gtgagatagc gtgcccatgc
      121 aataagtgtg ttaatctaaa atgggttgga tggtatgatg ctagaacaca tctactatgt
      181 gacggttttt ttaaaggata tacaattaaa actccgatca gcgaaccatg tgacattcct
      241 atggaagatg cagaagatga catgatagga ttggtgtctg acacccatca ttggtttgat
      301 gataacatac tcgaaactga agatcatagc ttaccaaaca aaagtgccaa aaagttttat
      361 aaaggattgg agagtgcaaa gcaagcacta taccctggat gtaaaaagtt ctctgttctt
      421 tcttttatag ttagactatt tcatagcaag tgtattggaa aatgtaatga caagggtttc
      481 agcatgatca ttgatacttt aaaggatgcc ttcccggaag tagccatacc taagtcattg
      541 tatgatctac ggaagttaat aagagattta ggactaggtt atgaaagaat cgatgcatgc
      601 cctaatgatt gtatgttgta ttggaaagaa aacaaggata aaacggagtg tgtcgtatgt
      661 cacacgtcat ggtataaaac aagtgaagat aattcagatg atgaggaaaa cttaacagcc
      721 aatgatcata ataaggtccc aactaaggtt ttgcgttact ttcctctcat cccgcatttg
      781 caaaggttat atatgtcatt tgaagctgct gcctccatga gatggcacga agagggtcgc
      841 acgaaagatg gtttactgag acatccggca gattcaccag cttggcaaac atttgatcat
      901 aattatcctg aatttgcaaa ggaatcccgt aatgtcaggc ttggtttagc gagtgacggg
      961 tttaaccctt ttggaaatat gagtaattcc catagaccat ctgcgccagg gaataatata
     1021 gacgtatatt tggaacctcc agtggatgag ctaaagttgt tgtgggatca tggagtagag
     1081 acatatgatt catcaacaaa tagtaatttt caaatgcgtg ctggtatggt atggacaata
     1141 agtgactttc cggcgtatgc caacttatct ggatggagca ctaaaggtaa acttgcatgt
     1201 ccatcctacc ataagcatac aaaatcgatt cggttgaaac gtagcaggaa atttgttttt
     1261 atgggatatc atcgattttt gtcaaagaga catgcgtatc gaaaggataa aaattcgttt
     1321 gatggcacag aagagttgga gagtaaacca acttgcttga cagggtcaga cgttctcaat
     1381 gagctaaatg gtattgaatt taaatttggg aaactagtca aggacaaccc agtattgccg
     1441 tataattgga agaagagaag tatattcttc aaattaccgt actggaaaga caacttgata
     1501 cgacataatc tagatgtaat gcatattgag aaaaatgtat gtgatagtgt cattggaaca
     1561 ttaatgaatt tagatggaaa gacaaaagat catttaaatg ggcgttatga tttagaagaa
     1621 atggaaattc gaaaggaact acatcctgaa gttctagaaa acaacaaagt gtatttgcca
     1681 cctgcgtgtt tctcaatgaa taaaaaagaa aaagatagat tttgtcggat gcttaaagca
     1741 gtgaaagttc ctgatggtta ttcagctaat atttcaagat gcgttcaact caaccctcca
     1801 aaaattggtg gccttaaaag tcacgacaat cacattttga tgcaacagtt gcttccaatt
     1861 tgcatatga
//
LOCUS       XM_071831737             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841525), mRNA.
ACCESSION   XM_071831737
VERSION     XM_071831737.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139841525"
                     /note="uncharacterized LOC139841525; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841525"
     CDS             1..585
                     /gene="LOC139841525"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687838.1"
                     /db_xref="GeneID:139841525"
                     /translation="MALKLDSIIIPRSCVGNGTIQNNLIPQKIGIFTWRFLKGRIAVK
                     TELEKRGIVLDSLLCPMCNNVTESIVHAIFSCKTAHDVWVGIFKWWKINLPSDITLDE
                     LLGGTGYGNFSSIQAKIWQAIMWTTRYIIWKNRNQKVFNNDSWIAQKIICEVQVKTFE
                     WIGNRSKRIHKDWHQWLYDPINLGFPAINNRDPG"
     misc_feature    <58..237
                     /gene="LOC139841525"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcgttaa aacttgacag tatcataatt cctaggagtt gtgttggcaa tggaactatt
       61 caaaataatt taataccaca aaagatcggg atcttcactt ggcgattttt aaaaggaaga
      121 attgcggtga aaacggagct cgagaagcgt gggattgttt tggattcatt attatgccca
      181 atgtgtaata atgttaccga atcaattgtt catgccattt tttcgtgtaa aaccgctcat
      241 gatgtttggg tgggcatctt caaatggtgg aaaataaact taccttcaga catcactcta
      301 gacgaactac ttggaggtac cggctatggg aatttttcga gtattcaagc taaaatatgg
      361 caagcaatca tgtggacaac gagatacatc atatggaaaa acaggaacca aaaagtattc
      421 aataacgact catggattgc tcagaaaatc atatgtgagg ttcaagtcaa aacgtttgaa
      481 tggatcggaa atcgttcgaa aaggattcat aaagattggc accaatggct atacgacccg
      541 atcaacttgg gattcccggc cattaacaac cgcgacccgg gttga
//
LOCUS       XM_071831738            1340 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 25 (LOC139841526), mRNA.
ACCESSION   XM_071831738
VERSION     XM_071831738.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1340
                     /gene="LOC139841526"
                     /note="probable protein phosphatase 2C 25; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139841526"
     CDS             60..1181
                     /gene="LOC139841526"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 25"
                     /protein_id="XP_071687839.1"
                     /db_xref="GeneID:139841526"
                     /translation="MCTIAISNSPVFSPSSKLSSSIIYKSSPESLTLTHSPSSCSSSP
                     SSSFKFRLQKPPSGLIRASNEEGPTLCSQTLLKRKRPTRLDIPVASLSFCADRSTPAP
                     VTAKDRWKEVVVEGDGYSVFCKRGKREAMEDRFIANVDFNGQNKKGFFGVFDGHGGSK
                     AAEFASTNIEKSIENEIEKMGEFEIVEAIRQGYLNTDSDFLKQEQRGGASCVTAIINS
                     GNLVVSNAGDCRAVVSRGGVAEALTSDHRPSRLDEKQRIDSLGGYVDCSRGTCRVLGT
                     LAVSRGIGDRSMKQWITAEPETKILNITPEFEFLILASDGLWDKVSNQEAVDLARPFC
                     ASNDKLEAVSACKKLVELSASRGSVDDTSVMIVQLGRFC"
     misc_feature    411..1166
                     /gene="LOC139841526"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; Region: PP2Cc; cd00143"
                     /db_xref="CDD:238083"
     misc_feature    order(441..443,453..458,519..527,1002..1004,1137..1139)
                     /gene="LOC139841526"
                     /note="active site"
                     /db_xref="CDD:238083"
ORIGIN      
        1 cagcacaaaa attcaaccgt tacatacact acaccctaaa gtaaacgaaa aaaagtaaaa
       61 tgtgcaccat tgcaatatca aactcacccg tattttcacc atcatcaaaa ctttcatcat
      121 caatcatcta caaatcatcg ccggaatctt taactttgac tcactctcca tcatcgtgtt
      181 catcatcgcc gtcatcttcg ttcaagttcc ggctacagaa accaccaagt ggattaatta
      241 gagcttcaaa tgaagaggga cccactttgt gttctcaaac tttgttgaag agaaaaagac
      301 caactagatt agatattccg gttgcttctt tgagtttttg tgctgaccgg tcaactccgg
      361 cgccggtgac ggcaaaagat cggtggaagg aggtagtggt tgaaggtgat gggtattcgg
      421 ttttttgtaa aagagggaag agggaggcta tggaagatcg gtttatagct aatgttgatt
      481 tcaatggaca aaataagaag ggattctttg gtgtttttga tggacatggt ggatcaaaag
      541 cagctgaatt tgcatcaaca aatattgaaa aaagtatcga aaatgaaata gaaaagatgg
      601 gtgaattcga aatagttgaa gcaatcagac aaggttactt aaataccgat tccgacttct
      661 taaagcaaga acaacggggt ggagcttctt gtgtgaccgc tattatcaac tcgggcaatc
      721 ttgttgtatc gaacgcgggt gattgtcgtg ctgttgttag tagaggtgga gttgctgaag
      781 cactaacgtc ggatcatcgc ccttcacgac tagatgagaa gcaacgaata gactcattgg
      841 gtggttatgt tgattgtagc cgaggtacat gtcgagttct tggaacacta gctgtttcaa
      901 gaggaattgg agaccgtagc atgaaacaat ggattacagc tgaacctgaa actaaaatct
      961 tgaacattac acccgaattt gagttcttga tcttggcctc tgatggttta tgggacaaag
     1021 ttagcaatca agaagcggtt gatttagctc gacctttttg tgcttccaat gataaattag
     1081 aagcagtttc ggcttgcaag aagcttgttg aactctcggc ttctcgggga tcagtagatg
     1141 acacgagcgt gatgatcgtt cagttgggtc gtttttgttg aagatggtat ggaatgtgta
     1201 gaaagatcat caatataaaa attttattcg gatttttgat gatcgttttg tttcttctga
     1261 tagtattatt tagtattctt agttggactt ggttcattgt aacgattaac ttaattcatt
     1321 cattcatttt aacatgtttc
//
LOCUS       XM_071831739             657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841527), mRNA.
ACCESSION   XM_071831739
VERSION     XM_071831739.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..657
                     /gene="LOC139841527"
                     /note="uncharacterized LOC139841527; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841527"
     CDS             1..657
                     /gene="LOC139841527"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687840.1"
                     /db_xref="GeneID:139841527"
                     /translation="MGNRYSGIIPRRTMRHKVFGCSYRLLHKVGRSETAQNNFGKADP
                     QFCMGKHFAHPQANVQCEVTNRDIVLGIKERLGLCRRGWIDELPNVLWAHPTTSKGAT
                     NETPFSLVYGSEAVISAEINVPTMRILSFDESSNSEELRENLNLVEESREMAAVKEAI
                     NKQRIGSYYNKRVQPLSFQLDDLVWRKNEASRAEDTGKLGSKWEGPYKVIGVSDTGAY
                     "
ORIGIN      
        1 atgggcaatc gatatagtgg gatcattcct cgcaggacca tgaggcataa agtttttggt
       61 tgtagctata gattacttca caaagtgggt agaagtgaaa ccgctcaaaa caatttcgga
      121 aaagcagatc cgcaattttg tatgggaaaa catttcgcgc acccccaggc aaatgtccaa
      181 tgtgaagtga caaatcgaga tatcgtacta ggtatcaaag aaagacttgg gttgtgtcga
      241 aggggttgga tagatgaact accaaacgtg ttgtgggcac accccacgac ctcaaagggc
      301 gcaaccaatg aaacaccttt tagcttggtg tacgggtccg aggcagtaat atctgcggaa
      361 ataaatgtgc caaccatgcg catattatcc ttcgatgaaa gtagcaatag tgaagaactg
      421 cgtgaaaatc taaatttagt tgaagaaagc agggaaatgg cggcagtaaa agaagcaatc
      481 aacaagcaaa gaatcggaag ctactacaat aaacgcgtgc aaccattatc tttccagttg
      541 gatgatttgg tgtggcgaaa gaatgaagca agtagagcgg aggatacggg taaacttgga
      601 tccaaatggg aaggaccata caaggttatt ggtgtaagcg atacaggggc atattag
//
LOCUS       XM_071831740            1041 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxidase 19
            (LOC139841528), mRNA.
ACCESSION   XM_071831740
VERSION     XM_071831740.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1041
                     /gene="LOC139841528"
                     /note="peroxidase 19; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139841528"
     CDS             1..1041
                     /gene="LOC139841528"
                     /codon_start=1
                     /product="peroxidase 19"
                     /protein_id="XP_071687841.1"
                     /db_xref="GeneID:139841528"
                     /translation="MSLYYRLSILMFIFILLLCFTTIIFSSQATIVNTSLIRHRILTF
                     DYYDKTCPQLEQIVGFVTSQKFKVSPATAPATIRLFFHDCFVQGCDGSILISSKPGSK
                     ELAEKDAQDNKEIPEEAFDSIEQAKAMVESKCPGVVSCADILALAARDYIHLSGGPYY
                     PVKKGRWDGRTSMASLVYANIPHANSTIDDLLKLFSSKGLTINDLVVLSGAHSIGFAH
                     CKNFVNRLYNFQGTNKPDPNIDPRLLKSLKMSCPQYGGNIGVVAPFDATTPFAFDNAY
                     YQNLQGKLGLLASDNVLFLDPRTRPLVQDLGKDKNKFFGDFSLAIEKLGNISVKRGKK
                     HGEIRRVCSMHL"
     misc_feature    124..1029
                     /gene="LOC139841528"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; Region: secretory_peroxidase; cd00693"
                     /db_xref="CDD:173827"
     misc_feature    order(211..213,220..225,229..234,241..246,340..342,
                     352..354,544..555,571..573,583..585,613..615,622..627,
                     631..636,640..654,658..663,790..792,859..861,865..867,
                     961..963)
                     /gene="LOC139841528"
                     /note="active site"
                     /db_xref="CDD:173827"
     misc_feature    order(211..213,220..225,229..234,241..243,334..336,
                     340..342,352..354,544..552,571..573,583..585,613..615,
                     622..627,631..636,640..654,661..663,790..792,859..861,
                     865..867,961..963)
                     /gene="LOC139841528"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:173827"
     misc_feature    order(232..234,328..333,544..555,652..654,658..663)
                     /gene="LOC139841528"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173827"
     misc_feature    order(247..249,256..258,268..270,274..276,637..639,
                     793..795,802..804,811..813,817..819)
                     /gene="LOC139841528"
                     /note="calcium binding sites [ion binding]; other site"
                     /db_xref="CDD:173827"
ORIGIN      
        1 atgtctctct actatcgtct ttcaatctta atgttcatat tcatactact actctgcttt
       61 actaccatca ttttctcttc tcaagccacc attgtaaaca cgtccctaat acgacatcga
      121 atcctaacct ttgattacta cgataaaaca tgccctcaac tcgaacaaat tgtcggtttt
      181 gtcacttctc aaaaatttaa agtatctccg gctacagctc cagctacaat ccgtctattc
      241 tttcacgact gctttgtaca ggggtgtgat gggtcaattt tgatatcaag taagccagga
      301 agtaaagaat tagcggaaaa ggacgcgcag gataacaagg agataccaga agaggctttt
      361 gatagtatcg aacaggcgaa agcaatggtg gaaagcaaat gtccaggtgt tgtatcttgt
      421 gcagatatac ttgcacttgc agccagagat tatattcatc tgagtggagg tccatattat
      481 ccagtgaaga aaggtcggtg ggacggacgg acatcaatgg caagcttggt atatgcaaac
      541 attccacacg caaattccac catcgatgac cttctcaagc tcttctcatc aaaaggtcta
      601 acaattaacg atctagtagt cctgtctgga gcccattcta ttgggttcgc tcattgtaaa
      661 aactttgtga accgtcttta caactttcaa ggaacaaaca agccagatcc aaatattgat
      721 ccaaggctac tcaagtccct taaaatgtca tgcccacaat atggtggcaa cattggtgtt
      781 gtagcacctt ttgatgctac aactcctttt gcatttgaca atgcgtacta ccaaaacttg
      841 caagggaaat tggggctgtt ggcaagtgac aatgtattgt ttttggatcc aagaacaagg
      901 cctttagtcc aagatttagg aaaggataag aacaagtttt ttggagattt ttcattggct
      961 attgaaaagt tgggaaacat tagtgtaaaa agagggaaaa aacatggtga gatacgaaga
     1021 gtatgcagca tgcatttata a
//
LOCUS       XM_071831741            1061 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ran-binding protein 1
            homolog b-like (LOC139841529), mRNA.
ACCESSION   XM_071831741
VERSION     XM_071831741.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1061
                     /gene="LOC139841529"
                     /note="ran-binding protein 1 homolog b-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139841529"
     CDS             114..770
                     /gene="LOC139841529"
                     /codon_start=1
                     /product="ran-binding protein 1 homolog b-like"
                     /protein_id="XP_071687842.1"
                     /db_xref="GeneID:139841529"
                     /translation="MASNDPEHREEEETAAVEDEDTGAQIAPIIKLEEVSVTTGEEDE
                     DAILDLKAKLYRFDKEGNQWKERGAGSVKFLKHKESGKVRLVMRQSKTLKICANHLVI
                     ATMVVQEHAGNEKSCVWHAADFSDGELKDELFCIRFASIENCKKFMETFKEVAESQQD
                     KEENKDASDTAGLLENLSVEDKKGKETLEKVNEVNEEKTPEKVEEPEKAAVDSEKKEE
                     "
     misc_feature    180..581
                     /gene="LOC139841529"
                     /note="Ran-binding domain; Region: RanBD_RanBP1; cd13179"
                     /db_xref="CDD:270000"
     misc_feature    order(213..218,222..233,270..272,276..278,282..284,
                     303..314,363..365,369..371,375..380,384..398,405..413,
                     435..446,465..467,471..473,483..485,492..494,498..500,
                     510..512,522..524)
                     /gene="LOC139841529"
                     /note="Ran#RanBP1#RanGAP complex [polypeptide binding];
                     other site"
                     /db_xref="CDD:270000"
     misc_feature    order(213..218,225..233,258..260,276..278,282..284,
                     297..314,324..326,357..359,363..365,369..371,375..398,
                     405..413,435..446,453..461,465..467,471..473,483..485,
                     504..506,510..512,516..518,522..524)
                     /gene="LOC139841529"
                     /note="CRM1-RanBP1-RanGTP complex [polypeptide binding];
                     other site"
                     /db_xref="CDD:270000"
     polyA_site      1061
                     /gene="LOC139841529"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctgtataacc ttcatatctt tccgccgttt ttgcatccag aagtttcgtt ttcagcatat
       61 cttcatcggc tcacacaaaa aagcacacaa actttcaact tcatcactct tcaatggcaa
      121 gtaacgatcc tgagcacaga gaggaagaag aaaccgccgc tgttgaagac gaagacaccg
      181 gagctcagat cgctccgatc attaaacttg aagaagtttc cgtcacgacc ggcgaagaag
      241 atgaagatgc tattctcgat cttaaagcta agttatatcg attcgacaag gaaggaaacc
      301 agtggaagga gcgaggagct ggatcagtta agtttttgaa gcataaagaa agtggtaaag
      361 tgcgtttggt tatgcgtcaa tcgaaaaccc taaagatttg tgctaatcat ctagttattg
      421 ctactatggt tgttcaagag catgctggta atgagaagtc atgtgtgtgg catgctgctg
      481 atttttctga tggtgaactt aaggatgaac tgttttgcat cagattcgct tcaattgaaa
      541 actgcaaaaa gtttatggaa acttttaaag aggtggctga gtctcaacag gacaaagaag
      601 aaaacaaaga tgcttcagat acagctggac ttttagagaa cttgagtgtg gaagacaaaa
      661 aggggaagga gacacttgaa aaagtcaatg aagtcaacga ggagaagacg cctgaaaaag
      721 tcgaggaacc tgaaaaagca gctgttgatt cggagaagaa agaagaatag tgtttggctg
      781 cgcaggagtg gagttggtct gtcgggtcaa gatctgggtc ttggatttgc gtgaaggtaa
      841 agtattgggt cggtcaattg gtttagttcc aatttggttg tctgttgagt ctggtcggtt
      901 atagatattg ggagttcaca gaatcacaga tgctatttgt ccatctgttg ggagttttgt
      961 tgtcagttga tgcgtattag cattcgtctg tgttatttac aactacgatt ggtgcttctt
     1021 gaattattgg atatgatttg ttatttattg cttattgctt a
//
LOCUS       XM_071831742            1119 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841530), mRNA.
ACCESSION   XM_071831742
VERSION     XM_071831742.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1119
                     /gene="LOC139841530"
                     /note="uncharacterized LOC139841530; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841530"
     CDS             1..1119
                     /gene="LOC139841530"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687843.1"
                     /db_xref="GeneID:139841530"
                     /translation="MKNWRARIKEAYFDPSLSMEVQLNSPPEELTKRYWGKLLEYWSR
                     ERVKAMTDKNKANSANKKLTQVSGKKSFVRIREELKMSFGREPTRVDMFKKCFTNGSA
                     DGEAATVLKQMKELTDKLVDGETDTPGPDDIFSQVMGRNHSSSPQTYGLGVRAKYLWG
                     VVPGRSAVRKENAQLKSDKAELENENSRLKAQLAQKNNGSGVENEGSGHRDNGPVVKC
                     LKVRDEVYVKSIKNNKVARGKLVSMYPTTVVLQTELGAGWCEVELQVAIERNEVLFRP
                     YEHMRYFHDVIGTSTAWPTALIETMICNMLMLPRNVLAFVVLKQYYNLKRKSNMNQDQ
                     KDQIAEAGPKGPKWLNQAGKPQIALPGTKGPIILFELG"
     misc_feature    103..456
                     /gene="LOC139841530"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
     misc_feature    <499..585
                     /gene="LOC139841530"
                     /note="leucine zipper found in the TSC22 domain leucine
                     zipper transcription factors, c-Myc-binding protein, and
                     similar proteins; Region: ZIP_TSC22D-like; cl40461"
                     /db_xref="CDD:424092"
     misc_feature    670..855
                     /gene="LOC139841530"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
ORIGIN      
        1 atgaaaaatt ggagggcaag aataaaggaa gcctactttg atccatcctt atcaatggag
       61 gttcaattga attcaccacc tgaagaactc accaaaagat attggggaaa acttcttgaa
      121 tattggagta gagaaagggt gaaagcgatg accgacaaaa ataaagccaa tagtgctaac
      181 aagaagttga cgcaagtgtc cggaaaaaaa agttttgtaa gaatccgtga agaactgaag
      241 atgagtttcg gaagagaacc tactcgggtc gatatgttta agaaatgttt tacaaatgga
      301 agtgcagatg gtgaagctgc aactgtactc aaacaaatga aagaacttac ggacaaactt
      361 gtggacggtg aaactgatac acctggacca gacgatattt tttcccaggt aatggggcgc
      421 aatcattcta gttctcccca aacgtatgga cttggtgttc gcgctaaata tttgtggggc
      481 gtagtacctg gtcgatcagc agttcgtaag gagaatgctc aactcaagtc tgataaggca
      541 gaacttgaga atgaaaattc aaggttaaaa gcccagttgg ctcagaagaa taatggttct
      601 ggtgttgaga atgaaggttc gggtcatcgg gataatggtc ccgttgttaa atgtttaaag
      661 gtgagagatg aagtgtatgt gaaaagtatt aaaaacaaca aggtagcaag aggaaagttg
      721 gtaagcatgt atccaactac ggttgttttg cagacagaac ttggagctgg ttggtgtgag
      781 gtagagcttc aagtggccat cgaaagaaat gaagttttgt ttaggccata tgagcatatg
      841 agatactttc atgatgtcat tggtacatct actgcttggc ctactgcttt gatcgagaca
      901 atgatctgta atatgttgat gttacctaga aatgttcttg catttgtggt gttgaaacaa
      961 tattataatc tcaaaagaaa atcgaatatg aaccaggacc aaaaggacca aatagctgaa
     1021 gcaggcccga aaggcccaaa atggctgaat caggccggta agccccaaat agcattaccg
     1081 ggcacaaaag gcccaattat cttatttgaa ctgggctag
//
LOCUS       XM_071831743            2043 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841531), mRNA.
ACCESSION   XM_071831743
VERSION     XM_071831743.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2043
                     /gene="LOC139841531"
                     /note="uncharacterized LOC139841531; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841531"
     CDS             1..2043
                     /gene="LOC139841531"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687844.1"
                     /db_xref="GeneID:139841531"
                     /translation="MDSTWMSKCRSTPEFEEGLDKFLERIFSRKETGSHIYCPCINCG
                     NLKGVDRVEAKSHLLCDGFFEGYKIPTVLLEPDDTLMWDAEDYMEGLAECIFHMFEDE
                     YEDDFDIPETKNHSSVPNINAEMFYKVLGDAKKEVYPGCKVSVLSFIVRLFHSKCVGK
                     CNEKGFSMILDTMREAFPHASTPKSLYEVRNLIRELGLGFEKIDACPNDCMLYWKQNK
                     DKIICDACQTSRYKQSSNNDSEEESTTQADNDGDYKARKVGAKVLRYFPLIPRLQRLF
                     MSPKTSEYMRWHQESRTKDGLLRHPADSPAWKTFDLQNHEFAKEPHNVRLGLASDGFN
                     PFGNMSVSHSNNIDVYMQPIIDELKELWDTGVNTYDASTKSNFLLRACLIWTISDFPA
                     YANLSGWSTKDKKEKEKFCKVLKRVKVPDGYAANISRQLCSKVLKTIDLIRIEKDILK
                     ILCDLERLFPLSFFDVMIHLVVHLASEARLGGPVHYRWMYPIERYLGTLKSYMQNRSK
                     PEGSIAEGYLAEECVSFCSLYLASDVETIHNKTSQNHDDGGDETVLPIFCMFGRPIGA
                     TNVVKFGHDTLAIAHSHVLFNCSEIDFLRTEHLSILRQEYQTKSKRYIERLHSREFQE
                     WLTDYVDEDMAGDNRITNDITALANGPYVVVKKYKGYIIYGFRFHIKDVEKNRTTQ"
     misc_feature    10..204
                     /gene="LOC139841531"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    883..>1206
                     /gene="LOC139841531"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1291..1620
                     /gene="LOC139841531"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
ORIGIN      
        1 atggactcga cttggatgtc taaatgtaga tctacccctg aattcgaaga aggactcgac
       61 aaattcttag aacgtatttt ctctagaaag gaaacaggta gtcatatata ttgtccgtgc
      121 ataaattgcg gtaatctcaa aggggttgat cgggttgagg ctaaatcaca tctgctatgt
      181 gacggttttt tcgaaggcta taaaattcca actgtgcttc tcgaaccaga tgatacacta
      241 atgtgggatg ctgaagatta tatggaagga ttggctgaat gcatcttcca tatgtttgaa
      301 gatgaatatg aagatgactt tgatatccca gaaactaaaa accatagtag tgtaccaaac
      361 ataaatgctg aaatgtttta taaagtattg ggagatgcaa agaaagaagt atatcccggc
      421 tgtaaggtct ctgttctttc gttcattgtt agactcttcc actcgaagtg tgttggaaaa
      481 tgtaatgaaa aaggattcag catgattctt gacacaatga gggaagcctt ccctcatgct
      541 tccacaccga agtcattgta tgaagtcagg aacttaataa gagagttggg tcttggtttt
      601 gagaaaattg atgcttgtcc aaatgattgt atgttgtact ggaaacaaaa caaggacaaa
      661 attatatgtg acgcatgtca gacctcaaga tataaacaaa gtagcaataa tgattctgaa
      721 gaagagtcaa ccacacaagc tgataatgat ggtgattata aagctaggaa ggttggagca
      781 aaagtgttgc gttattttcc actcatacca cggttgcaaa gattgtttat gtcccctaaa
      841 acgtccgagt atatgagatg gcatcaagag agtcgtacga aagatggtct attaagacat
      901 cctgcagatt caccagcctg gaaaacattc gatcttcaga atcatgaatt tgctaaagaa
      961 cctcataatg tgaggcttgg tttggcgagt gatgggttta acccttttgg aaacatgagt
     1021 gtttcacata gtaataatat agacgtctat atgcaaccta taattgatga gttgaaggag
     1081 ttgtgggata ctggagtaaa tacttatgat gcatccacaa agagtaactt cctactgcgt
     1141 gcatgtttga tatggacgat aagtgacttt cctgcttatg cgaatttatc gggttggagc
     1201 actaaagata aaaaggagaa agaaaaattt tgtaaggtgc taaaaagggt gaaagtgcca
     1261 gatggttatg ctgctaatat ttctagacaa ttatgctcaa aagttcttaa gactattgac
     1321 ttaattcgga tagaaaaaga tattttaaaa atactttgtg atttagaaag gctttttcca
     1381 ctgtcatttt ttgacgtcat gattcatcta gtagttcatc tagcttcaga ggccagatta
     1441 gggggacctg ttcattaccg ttggatgtat ccaatcgaga ggtatttagg tacattaaaa
     1501 tcatatatgc aaaacaggag taaacccgag ggttcaattg ccgaaggata tctagctgaa
     1561 gagtgtgttt cattttgttc tttgtattta gccagtgatg tcgagactat acataataag
     1621 actagtcaga atcatgatga tggtggtgat gagactgttt taccaatatt ttgtatgttt
     1681 ggtcgaccca ttggtgcaac aaacgtagta aaattcggcc acgacacttt ggctattgca
     1741 cactcacatg tgttgtttaa ttgtagtgaa atagatttct tgcgaacaga gcatctgagt
     1801 attctacgtc aagaatatca gactaaaagt aagcgttaca ttgaacgttt acatagtcgg
     1861 gagtttcagg agtggctgac tgattatgtt gatgaggata tggctgggga taacagaatc
     1921 acaaatgata taacggcatt ggcaaacggt ccatatgtgg ttgtaaagaa atataaggga
     1981 tatatcatat atggtttccg atttcacatt aaagatgtag agaagaatag gacaacacaa
     2041 taa
//
LOCUS       XM_071831744             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841533), mRNA.
ACCESSION   XM_071831744
VERSION     XM_071831744.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139841533"
                     /note="uncharacterized LOC139841533; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841533"
     CDS             1..606
                     /gene="LOC139841533"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687845.1"
                     /db_xref="GeneID:139841533"
                     /translation="MTAVQAADATGTITGHVFVHHRALFVLFDSGSTHSIVSIKSSKY
                     LKVSPTWLSTPFMISTPMDSIEIIDRVFQNCRLEFNDCMFPANLFPMTMHNFDIILGM
                     DWLSRHHATIDCYSKRFLFGNHSIHDCVFNGDLPVKSIKVISALMAQKLISHGCVGYF
                     ASIQNLSIESPSFENIEVVREFPDVFPDELQGLLPVREVEF"
     misc_feature    7..369
                     /gene="LOC139841533"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(85..87,91..93,97..99,172..180,295..297)
                     /gene="LOC139841533"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..93
                     /gene="LOC139841533"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..87
                     /gene="LOC139841533"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(172..183,193..204)
                     /gene="LOC139841533"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgactgctg ttcaggctgc tgacgctaca ggtactatta ctggtcatgt atttgtacac
       61 catcgtgccc tcttcgttct atttgattct ggctctacgc actccattgt ttctattaag
      121 agctcaaaat atttgaaagt gtctccaact tggttgtcta ctccatttat gatctctacc
      181 ccaatggata gtattgaaat tatagatcgt gtgtttcaaa actgccgttt ggaattcaat
      241 gactgcatgt ttcccgcaaa tctctttcct atgaccatgc ataactttga cattattctt
      301 ggcatggatt ggttatctcg ccatcacgcg actatcgatt gttattctaa gaggtttttg
      361 tttggaaatc attctataca cgattgtgtc tttaatggtg atcttcctgt aaaatctatt
      421 aaggttatct cagcgcttat ggcgcaaaag ctcatttcac atggttgtgt tggttatttt
      481 gcttctattc agaatctgtc tatcgagagt ccttcgttcg aaaatattga ggttgttcga
      541 gagtttcctg atgtatttcc tgacgaattg cagggtttgc ttccagttcg tgaagttgaa
      601 ttttag
//
LOCUS       XM_071831745            1416 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides acylsugar acyltransferase
            3-like (LOC139841534), mRNA.
ACCESSION   XM_071831745
VERSION     XM_071831745.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1416
                     /gene="LOC139841534"
                     /note="acylsugar acyltransferase 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841534"
     CDS             1..1416
                     /gene="LOC139841534"
                     /codon_start=1
                     /product="acylsugar acyltransferase 3-like"
                     /protein_id="XP_071687846.1"
                     /db_xref="GeneID:139841534"
                     /translation="MLTNFFRFGRRQLHTIISREIIKPSSPTPPHPRVYNLSELDLLN
                     TKAYMPLILFYPNANHNHSLSDDEKGKLLKKSLSQSLTRYYPFAGKFSTNRTYIDCND
                     NGVVFVEATNDNQLDTFQRMSAHDDTLDQLFADGVRWYNNISSTNVLAIQLNHFSCGG
                     VAVAISLSHLIADGSSLGSFLSYWACIALHGSTNHKHVLELEPYFINSVQSPEPAPAP
                     APDSTTASSAPDRGTCPISDNNKTNFVGKKFVFPNSKLSDLKNQVAVEVATNGSALPK
                     NVYPTRIEVLTSLIYKTATAAATKRTGCFKPYYLLFMFNMRDKFVKKLPQTTIGNFVL
                     FVMIPSIHRSETASLATIVTQLKKEKLQVEGIENVQQVVENVKSLRAKLENPDLENFA
                     KGSYWCSSFCGFPFNKLDFGWGKPMGITLALNTKNPKKNGFVLMDTPFGDGIEAFVTL
                     EKECMDIFENDKELLSFCQIN"
     misc_feature    43..1395
                     /gene="LOC139841534"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgttaacaa atttttttag attcggaaga agacaacttc acaccattat ttctcgagaa
       61 ataatcaagc cttcatctcc aactcctcct catcctcgcg tttataatct ttccgagctc
      121 gatctactta acacgaaagc atatatgcct ttaattctct tctacccaaa cgctaatcac
      181 aatcacagtt taagtgacga cgaaaaaggc aagttgttga aaaaatcctt gtcacaaagc
      241 ttaacacgat actatccatt tgcaggtaag ttttctacga acagaacata catcgattgt
      301 aatgataatg gtgttgtatt tgttgaagct acaaatgata atcaactcga cacatttcaa
      361 cgtatgagtg cacatgatga cactttggac caactttttg ctgatggtgt tcggtggtat
      421 aacaatatta gtagtacgaa tgtgcttgcg attcaactca atcacttttc atgtggtgga
      481 gttgcggtgg cgatttcttt gtctcacctc attgctgatg gatctagtct agggtcgttt
      541 cttagttatt gggcttgcat agcgcttcat ggttcgacta atcacaaaca tgtactagaa
      601 cttgaacctt attttatcaa ctccgtccag tcaccagaac cagcaccagc tccagctcca
      661 gattcaacaa ctgcatcttc agctccagat cgaggtacat gtccaattag tgataacaat
      721 aaaactaatt ttgtgggaaa gaaatttgtg ttccctaact caaaattaag tgaccttaag
      781 aaccaagtcg cggttgaggt tgccaccaat ggatctgcat taccaaaaaa tgtttatcct
      841 acaaggattg aagtgttgac ctctctaatt tacaaaaccg caacagctgc agctaccaaa
      901 agaaccggtt gctttaagcc gtattatttg ttgtttatgt ttaatatgcg tgacaaattc
      961 gtcaaaaagc tcccacaaac taccattgga aattttgtgt tgtttgtgat gataccaagc
     1021 atacatagaa gtgaaactgc ttccttagct acaattgtaa cacaacttaa gaaagaaaag
     1081 ttgcaagttg aagggattga aaatgttcaa caagtagtcg aaaatgtaaa atcgttacgt
     1141 gccaaattgg aaaatccaga tttagagaat tttgcaaagg gatcatattg gtgttcaagc
     1201 ttttgtgggt ttccttttaa caaattagac tttggatggg gaaagcctat gggtataact
     1261 cttgcactca ataccaaaaa tcctaaaaaa aatggttttg tgctaatgga tactccattt
     1321 ggtgatggca ttgaagcatt tgttactttg gaaaaagaat gcatggacat atttgagaat
     1381 gataaggaac tgctttcatt ttgccaaatt aattag
//
LOCUS       XM_071831746            1416 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides acylsugar acyltransferase
            3-like (LOC139841535), mRNA.
ACCESSION   XM_071831746
VERSION     XM_071831746.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1416
                     /gene="LOC139841535"
                     /note="acylsugar acyltransferase 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841535"
     CDS             1..1416
                     /gene="LOC139841535"
                     /codon_start=1
                     /product="acylsugar acyltransferase 3-like"
                     /protein_id="XP_071687847.1"
                     /db_xref="GeneID:139841535"
                     /translation="MLTNFFRFGRRQLHTIISREIIKPSSPTPPHPRVYNLSELDLLN
                     TKAYMPLILFYPNANHNHSLSDDEKGKLLKKSLSQSLTRYYPFAGKFSTNRTYIDCND
                     NGVVFVEATNDNQLDTFQRMSAHDDTLDQLFADGVRWYNNISSTNVLAIQLNHFSCGG
                     VAVAISLSHLIADGSSLGSFLSYWACIALHGSTNHKHVLELEPYFINSVQSPEPAPAP
                     APDSTTASSAPDRGTCPISDNNKTNFVGKKFVFPNSKLSDLKNQVAVEVATNGSALPK
                     NVYPTRIEVLTSLIYKTATAAATKRTGCFKPYYLLFMFNMRDKFVKKLPQTTIGNFVL
                     FVMIPSIHRSETASLATIVTQLKKEKLQVEGIENVQQVVENVKSLRAKLENPDLENFA
                     KGSYWCSSFCGFPFNKLDFGWGKPMGITLALNTKNPKKNGFVLMDTPFGDGIEAFVTL
                     EKECMDIFENDKELLSFCQIN"
     misc_feature    43..1395
                     /gene="LOC139841535"
                     /note="Transferase family; Region: Transferase; pfam02458"
                     /db_xref="CDD:460564"
ORIGIN      
        1 atgttaacaa atttttttag attcggaaga agacaacttc acaccattat ttctcgagaa
       61 ataatcaagc cttcatctcc aactcctcct catcctcgcg tttataatct ttccgagctc
      121 gatctactta acacgaaagc atatatgcct ttaattctct tctacccaaa cgctaatcac
      181 aatcacagtt taagtgacga cgaaaaaggc aagttgttga aaaaatcctt gtcacaaagc
      241 ttaacacgat actatccatt tgcaggtaag ttttctacga acagaacata catcgattgt
      301 aatgataatg gtgttgtatt tgttgaagct acaaatgata atcaactcga cacatttcaa
      361 cgtatgagtg cacatgatga cactttggac caactttttg ctgatggtgt tcggtggtat
      421 aacaatatta gtagtacgaa tgtgcttgcg attcaactca atcacttttc atgtggtgga
      481 gttgcggtgg cgatttcttt gtctcacctc attgctgatg gatctagtct agggtcgttt
      541 cttagttatt gggcttgcat agcgcttcat ggttcgacta atcacaaaca tgtactagaa
      601 cttgaacctt attttatcaa ctccgtccag tcaccagaac cagcaccagc tccagctcca
      661 gattcaacaa ctgcatcttc agctccagat cgaggtacat gtccaattag tgataacaat
      721 aaaactaatt ttgtgggaaa gaaatttgtg ttccctaact caaaattaag tgaccttaag
      781 aaccaagtcg cggttgaggt tgccaccaat ggatctgcat taccaaaaaa tgtttatcct
      841 acaaggattg aagtgttgac ctctctaatt tacaaaaccg caacagctgc agctaccaaa
      901 agaaccggtt gctttaagcc gtattatttg ttgtttatgt ttaatatgcg tgacaaattc
      961 gtcaaaaagc tcccacaaac taccattgga aattttgtgt tgtttgtgat gataccaagc
     1021 atacatagaa gtgaaactgc ttccttagct acaattgtaa cacaacttaa gaaagaaaag
     1081 ttgcaagttg aagggattga aaatgttcaa caagtagtcg aaaatgtaaa atcgttacgt
     1141 gccaaattgg aaaatccaga tttagagaat tttgcaaagg gatcatattg gtgttcaagc
     1201 ttttgtgggt ttccttttaa caaattagac tttggatggg gaaagcctat gggtataact
     1261 cttgcactca ataccaaaaa tcctaaaaaa aatggttttg tgctaatgga tactccattt
     1321 ggtgatggca ttgaagcatt tgttactttg gaaaaagaat gcatggacat atttgagaat
     1381 gataaggaac tgctttcatt ttgccaaatt aattag
//
LOCUS       XM_071831747             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841536), mRNA.
ACCESSION   XM_071831747
VERSION     XM_071831747.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139841536"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139841536"
     CDS             1..585
                     /gene="LOC139841536"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687848.1"
                     /db_xref="GeneID:139841536"
                     /translation="MQVHFQAVKRIVRYIKGTISYGLSFLHSSSPNISGYSDADWARC
                     IETRRSTYGYSIFLGGNLVSWSAKKQPTVSRSSCESEYRALANTASEIIWITYLLREL
                     HVLPSGRPTLLCDNRSVLFLSQNPISHKRAKHIDIDYHFVRELVLSGRLYTKYVSTHL
                     QLADIFTKSLTCPLFAGFRSKLRVGPPPSTLAGG"
     misc_feature    103..519
                     /gene="LOC139841536"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(112..123,226..234,241..243,343..345,421..423,
                     502..504)
                     /gene="LOC139841536"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcaggttc attttcaggc tgttaaacgt atcgtgcggt acattaaagg cacaatatcc
       61 tatgggttat cttttcttca ttcatcatct ccaaatatct caggatattc tgatgctgac
      121 tgggctcggt gtatagagac tcgacggtct acctacggct actctatctt tttaggtggg
      181 aatcttgttt catggagtgc aaagaagcaa ccaacggttt ctcgctctag ctgtgaatct
      241 gagtatcgtg cattggccaa tactgcttct gagattatct ggattactta cctccttcga
      301 gaacttcatg ttttaccttc cggacgcccc acgcttctct gtgacaatag aagtgtgttg
      361 tttttgagtc aaaatcccat ctctcacaaa cgtgctaaac atatagacat tgattatcac
      421 tttgttcgtg aattggtact ttcgggtcga ctttatacca agtatgtctc cacacatctt
      481 cagttagctg acatctttac caaaagtctc acgtgtcctc tttttgcagg ttttcgctcc
      541 aagcttcgtg ttggtcctcc cccatctacg cttgcggggg ggtaa
//
LOCUS       XM_071831748             561 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841538), mRNA.
ACCESSION   XM_071831748
VERSION     XM_071831748.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..561
                     /gene="LOC139841538"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139841538"
     CDS             1..561
                     /gene="LOC139841538"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687849.1"
                     /db_xref="GeneID:139841538"
                     /translation="MRLIPYASVVGSLVYAQVCTRPDIAYITGMLGRYQSNPGMDHWK
                     AAKKVLRYLQGTKDLMLTYRRTDNLEVMGYSDSDFAKCKDDKKSTSGYIFMLSGGPIS
                     WKSHKQELTTTSTMMAEYVACYHAFSHAILLKNLISGLKVVDSISRPIRLYCDTSAAV
                     SFSIALVLVALGSCIENDTCDYIGLR"
     misc_feature    106..>270
                     /gene="LOC139841538"
                     /note="2-oxoglutarate decarboxylase/ hydro-lyase/
                     magnesium ion binding / thiamin pyrophosphate binding;
                     Region: PLN02980"
                     /db_xref="CDD:215530"
     misc_feature    214..>489
                     /gene="LOC139841538"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(226..237,340..348,355..357,463..465)
                     /gene="LOC139841538"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgagactta taccgtatgc ttcggttgta ggaagtcttg tatacgctca agtttgtacg
       61 cgtcctgata tcgcatacat aacgggcatg cttggaagat atcaatccaa tccaggaatg
      121 gatcattgga aagcagccaa aaaggtttta cgatatcttc aaggaactaa ggatttaatg
      181 ttgacttatc gaagaacgga taaccttgaa gttatgggtt actcggactc cgattttgcc
      241 aaatgtaagg acgataagaa atccacttca gggtacattt ttatgctttc agggggtcct
      301 atttcatgga agagtcataa gcaagaatta accacaactt ctaccatgat ggctgagtat
      361 gttgcatgct atcacgcttt tagccatgct attttgctca agaacttaat ttccggactt
      421 aaggtggttg actccatatc acgacccatt agactatact gtgacactag tgctgctgtt
      481 agtttctcaa tagcactagt tctagtggcg ctggggtcct gtatcgaaaa tgatacatgt
      541 gactatatcg gtttgcgtta g
//
LOCUS       XM_071831749             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841539), mRNA.
ACCESSION   XM_071831749
VERSION     XM_071831749.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139841539"
                     /note="uncharacterized LOC139841539; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841539"
     CDS             1..606
                     /gene="LOC139841539"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687850.1"
                     /db_xref="GeneID:139841539"
                     /translation="MEIIIVLNEHNNEYEQLISALTPTAIANCISGIEHLNGTNFVSW
                     KDQIKISLGITDLDYALRFDQPAPLTDESTVEQKTVHDIWERSNRMSLMIMKNSISPA
                     IRGAIPDSENAKEFLEFVEEQFKGSSKSHASTLILKMLTTKYDGVSGVREHIMMMNDM
                     ASKLKGMDMEISEGFLAHFIMTSLPSQFGPFKINYNTQRGK"
     misc_feature    280..>576
                     /gene="LOC139841539"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggaaatta ttatagtcct taatgagcat aataatgagt atgagcaatt aatttcagct
       61 ttgacaccca ctgctattgc aaattgtatt tctggtattg aacatttgaa cggaactaat
      121 tttgtatcgt ggaaggatca aattaagatt tctctcggca taactgattt ggactatgct
      181 ttaagatttg atcaacccgc acctcttacc gacgaaagta cggttgaaca aaagacggtt
      241 catgatatat gggaaagatc aaatcgcatg tctctaatga taatgaagaa ttctatatcg
      301 cccgctattc gaggagccat tcccgactcc gaaaatgcta aagaattctt agaatttgtc
      361 gaggaacaat ttaagggctc atccaaatct catgcgagta cccttattct taaaatgctt
      421 accacgaagt atgatggtgt tagtggggta cgtgagcaca tcatgatgat gaatgacatg
      481 gcctcaaaac taaagggcat ggacatggaa atatctgagg gttttctcgc tcacttcatt
      541 atgacatctc tcccttctca gtttggtcct tttaagatca attacaacac tcaaaggggg
      601 aaatga
//
LOCUS       XM_071831751             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841540), mRNA.
ACCESSION   XM_071831751
VERSION     XM_071831751.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139841540"
                     /note="uncharacterized LOC139841540; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841540"
     CDS             1..504
                     /gene="LOC139841540"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687852.1"
                     /db_xref="GeneID:139841540"
                     /translation="MNRSSSVASRFSNGAWLWSWWRPPRGGAEESQYAALSEVLLLVS
                     LSASLDHWTWENPPNNVFVVAHARRAIESSISSNTPSFSMWCKTVPIKVNIFIWRLNL
                     DRLPTIPNLEHRDILVDRDCCALCDVSEESRNHLFIRCDTSYQIWCRIGVWLDISIPV
                     LDSVEEL"
     misc_feature    <250..438
                     /gene="LOC139841540"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaaccgtt ccagttctgt tgcatcgaga ttttctaacg gtgcatggtt atggtcttgg
       61 tggcgccctc ctagaggagg tgcagaagag agtcaatatg cggccttaag tgaggtcctt
      121 ttattggtta gtctatctgc atctctagac cactggacgt gggaaaaccc tccgaataac
      181 gtcttcgttg ttgctcatgc tagacgtgct attgagagct ctatatcgtc taatacccct
      241 tctttctcca tgtggtgcaa aacggttcca attaaagtca acatcttcat ttggcgcctt
      301 aatcttgacc gtctcccaac gatcccaaat ctggagcata gagatatctt agtggataga
      361 gattgttgtg ccctttgtga cgtttctgaa gaatctcgga atcatctttt tataaggtgt
      421 gatacaagct atcagatttg gtgtaggatt ggtgtttggc tagacatttc tattccagtt
      481 ttggattcgg tagaagaact gtga
//
LOCUS       XM_071831752             561 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841542), mRNA.
ACCESSION   XM_071831752
VERSION     XM_071831752.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..561
                     /gene="LOC139841542"
                     /note="uncharacterized LOC139841542; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841542"
     CDS             1..561
                     /gene="LOC139841542"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687853.1"
                     /db_xref="GeneID:139841542"
                     /translation="MTSGVGHGRGKSLWTSPLASDGMFTVNKYGDYMDRKILPSTTTK
                     TCWFKFVPRKVNVFLWRFRLDLLPVRWLISAKGIEIHSIVCPVCNIGVETSDHLFFGC
                     TLALDLWRRLRMWLNYAMPTFSSWDTFILWIEGVHLSNIQKKRVTASVVTLLWAMWRY
                     RNGVVFNDVFCNRNSLFDLIRLLSFR"
     misc_feature    <130..324
                     /gene="LOC139841542"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgacgagtg gcgttggaca tggtcgaggg aagtcattgt ggacttcacc cctggcttca
       61 gatggtatgt tcacagtgaa caaatacgga gattacatgg atcgaaaaat acttccttcg
      121 actacaacga aaacgtgttg gtttaagttt gtgcctagaa aagttaatgt gtttctgtgg
      181 agatttagac tcgatttatt gccggttcgg tggctcatct cagctaaagg tatagaaatt
      241 cattcgattg tatgcccggt ttgcaacatc ggggtggaaa ctagtgacca tttatttttc
      301 gggtgtactt tggctttaga tctttggcgt aggctacgga tgtggttgaa ttatgctatg
      361 ccgactttct cttcatggga cacgttcatt ttatggatcg aaggcgttca tttatctaat
      421 attcagaaga aaagagtcac tgcttctgtg gttaccctcc tgtgggcgat gtggcgctat
      481 cggaatggtg tcgttttcaa cgatgttttt tgtaatagga atagtctttt tgatttaatt
      541 agattattgt cttttcgttg a
//
LOCUS       XM_071831753             354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841543), mRNA.
ACCESSION   XM_071831753
VERSION     XM_071831753.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..354
                     /gene="LOC139841543"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841543"
     CDS             1..354
                     /gene="LOC139841543"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687854.1"
                     /db_xref="GeneID:139841543"
                     /translation="MSHVEAVKRIFRYLKGTMHLGLWYPKFTGIDIMCFADSDDGRSM
                     IERKSTSGVCAFVGLCLTSWFSKKKTSVALSTTEAEYVAMGRACAQVLWMKQTFLDYV
                     STFDKHRVKFKMKLV"
     misc_feature    97..>300
                     /gene="LOC139841543"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtcgcacg tagaggccgt taaaaggatc tttagatact taaaaggaac aatgcatctt
       61 gggttatggt atccaaagtt taccgggatt gatattatgt gctttgcaga ttccgatgat
      121 ggtagatcaa tgattgaaag aaaaagcaca agtggagtat gcgcgtttgt ggggctttgc
      181 ttaacgtcat ggttctcaaa gaagaaaaca tccgtcgcat tgtctaccac cgaagccgaa
      241 tatgtagcga tgggaagagc gtgcgcacaa gtgctatgga tgaagcaaac cttcctcgat
      301 tacgtatcta cttttgacaa acatagagta aaattcaaga tgaaacttgt ctaa
//
LOCUS       XM_071831754            2630 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glyoxysomal processing
            protease, glyoxysomal (LOC139841544), mRNA.
ACCESSION   XM_071831754
VERSION     XM_071831754.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2630
                     /gene="LOC139841544"
                     /note="glyoxysomal processing protease, glyoxysomal;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 12 Proteins"
                     /db_xref="GeneID:139841544"
     CDS             127..2367
                     /gene="LOC139841544"
                     /codon_start=1
                     /product="glyoxysomal processing protease, glyoxysomal"
                     /protein_id="XP_071687855.1"
                     /db_xref="GeneID:139841544"
                     /translation="MGVPEIVEVARNYSAMIRVQGPDPKGLKMRKHAFHHYISGKTTL
                     SASGMVLSSSFEIGPLAKQLLSDEPMSLVLTVASIIEPFLSSKHRDQMSQVKPELIPG
                     AKIDILVEGNDKASDCESLRWLPAELITLLDIRASSVALQSLIGAYSGSTEHGWEVGW
                     SLASYSDGQTPYFDSTQKEVPNKHSPHISLQTRILCRACRGWCFNPLSGLLCVVSYVR
                     IALAQQHVLHMGKAHESFSNKASGSTVTSHEEMFGEQSVDSRVSGNLSTRIAVLKVPS
                     STSKDLPNLKISPGNKRGDLLVAMGAPFGVLSPAHFRSSISVGYVSNCYPPRSLHASL
                     LMADIRCLPGMEGSPVFGEQSEIVGILTKPLRQRGSGAEVQLVIPWEAIVEACDGFLL
                     PKTSNAKYSSKHVHEYPKSHIKPPNPVEKAMSSICLITIGDGVWASGVLLNEHGLILT
                     NAHLLEPWRFKKTAANDHHKTVSNIFFTPSKDTEDGPTTMSEISQSNYNKRNHQSIRV
                     RVDYMHRWVWCDASVLYVSKGPLDIAVLKLDFVPDKLQPIVMDFTCPSPGSKVYVIGH
                     GLFGPRCDFLPSACVGVVAKVVKARRCLGEPKQEDIPAMIETTAAVHPGGSGGAILNS
                     DGHMISLVTSNARHGGGTVIPHLNFSIPCAALEPILNFSKDMKDISILEILDRPDDHL
                     SSVWALMPPTSPKPKPGKEDNNVKEEIKGSRFAKFIAERQLLLKQIPHPDKTDSGYIK
                     LLPSKL"
     misc_feature    <931..1206
                     /gene="LOC139841544"
                     /note="Trypsin-like peptidase domain; Region: Trypsin_2;
                     pfam13365"
                     /db_xref="CDD:433149"
     misc_feature    1435..2013
                     /gene="LOC139841544"
                     /note="Trypsin-like peptidase domain; Region: Trypsin_2;
                     pfam13365"
                     /db_xref="CDD:433149"
ORIGIN      
        1 tcaaaagtag ctgtaacatt ctaccgggtt gcccgattaa gaagtcggta acccgattac
       61 ttgatttctt tcaacaaaag actgcaaatt ccaaaacaca aaaaacaaaa ttaaaaaatc
      121 aaagtcatgg gtgttccgga aatcgttgaa gttgctcgga attactccgc catgatcaga
      181 gttcagggac ctgacccaaa aggattaaag atgagaaaac atgcttttca ccattacatt
      241 tcagggaaaa ccactctttc agcatctgga atggtgttgt ctagttcgtt cgagattggc
      301 ccattagcta aacaactact tagcgacgag ccaatgtcat tggttctgac ggttgcatca
      361 ataatcgagc catttctatc atcaaaacac agagatcaaa tgtctcaggt caaaccagag
      421 ttgattcctg gtgctaagat agatatattg gtagagggga atgataaagc atctgattgc
      481 gaatctctac gttggctacc tgctgaactt ataacgttgc tcgacattcg cgcttcatct
      541 gttgctctcc aatctttaat cggagcttat tccgggtcaa cggagcatgg ctgggaagtt
      601 ggttggtcct tagcgtcata cagtgacggt caaacaccat attttgattc tacacaaaag
      661 gaggtaccta acaaacattc accgcatatt agtttacaaa caagaatttt atgtagagcc
      721 tgtagaggtt ggtgtttcaa cccattaagt gggctgcttt gtgttgtatc ttatgttagg
      781 atcgctttag cccaacaaca tgtcctacat atgggcaaag cccatgagtc ctttagtaac
      841 aaggcttccg gatcaacggt cacgagtcac gaggaaatgt ttggggaaca atctgttgat
      901 tcacgtgtat cgggaaattt gtcgactcga attgctgtac tgaaagttcc ttcaagtacc
      961 tctaaggatc tgccaaatct aaagatatca ccgggaaata aaagggggga tcttcttgta
     1021 gctatgggtg ctccttttgg cgtcttgtca cctgctcatt ttcgtagcag tatatcagta
     1081 gggtatgttt cgaattgcta ccctccaaga tcgttacatg catcattgtt gatggctgac
     1141 attcggtgtc ttcctggaat ggaaggtagt ccagtttttg gagaacaatc agagatcgtt
     1201 ggcatcctta caaagccact gagacagagg ggtagtggtg ctgaggttca gctggtgatt
     1261 ccttgggaag ccattgtaga agcttgtgac ggctttctat tacccaaaac aagcaacgca
     1321 aaatattctt cgaaacacgt tcacgagtat cccaaatccc atataaaacc gccaaatccc
     1381 gttgagaagg cgatgtcttc aatatgcctt attactatag gagacggtgt atgggcatct
     1441 ggtgttttac tcaacgaaca tggccttatt cttacaaacg cacacctttt ggagccatgg
     1501 aggttcaaga aaacagcagc caatgatcat cataaaactg tgtcaaatat cttttttacc
     1561 ccttcaaagg atactgaaga tgggcccaca acaatgtcgg aaatttctca atctaattat
     1621 aacaagagaa atcaccaaag catacgggtc cgtgtggatt atatgcaccg ttgggtgtgg
     1681 tgtgacgcta gtgtacttta tgtatctaaa ggtcctttgg acattgcagt attaaaactt
     1741 gattttgtcc ctgataagct tcagcctatt gtcatggact ttacatgccc ttctccagga
     1801 tcaaaggttt acgtcattgg acatggactt tttggacctc gttgtgattt tcttccatca
     1861 gcttgtgttg gagtggttgc aaaagtcgtt aaagcacgaa ggtgtttagg agagcccaaa
     1921 caagaagata ttccggcgat gatagaaacg acagctgccg tgcatcctgg cggtagtggt
     1981 ggtgctatac tcaattcaga tggtcacatg atcagtcttg ttacaagcaa tgctaggcat
     2041 ggtgggggga cagttattcc tcatttgaat ttcagcattc catgcgcagc attggagcct
     2101 atcctaaact tctcaaaaga tatgaaggac atatcaatat tggaaatact tgacagaccc
     2161 gatgatcacc tttcttctgt atgggcattg atgccgccca catcccccaa gcccaaacca
     2221 ggtaaagaag ataataatgt taaagaagaa ataaagggtt caagatttgc aaaatttata
     2281 gccgaaagac aacttctttt gaaacaaata ccacatcctg acaagacgga tagcggttat
     2341 ataaaacttc tccccagcaa attgtgacag tccttgtatc tgagaattac ccaataaacc
     2401 aagaatgtgg tccataaaga gagtgtttct aaacgatgac aacataaata cgatgatttg
     2461 ctgtaatata ttcactttat cgggagatgt ataaggtgta tgttttttta tcgtcgaata
     2521 aggtaaatat aggggaccaa tgtgtctaac catgaactgt acctttcgat ctcaagccct
     2581 gaaggtaaac catatgatac agttttaaca cttgtataaa tctgtttata
//
LOCUS       XM_071831755             486 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841545), mRNA.
ACCESSION   XM_071831755
VERSION     XM_071831755.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..486
                     /gene="LOC139841545"
                     /note="uncharacterized LOC139841545; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841545"
     CDS             1..486
                     /gene="LOC139841545"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687856.1"
                     /db_xref="GeneID:139841545"
                     /translation="MSINSSTNLITAEDTNSPNNPLFLHQHDHPGLILISKKLTGSEN
                     YSTWRRSMTIALNAKNKLQIVTGDYTEPSADSRNKALWDRTNDMIISWILNTISDQIG
                     NSLSFVNYVAALWKELQENYSQLDGHRIYQLSNDIAQLKQTDCNVEIYYQKLFGMNLM
                     L"
     misc_feature    73..219
                     /gene="LOC139841545"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
ORIGIN      
        1 atgtcaatta actcttctac aaatctgatc actgctgaag acactaattc tcctaataat
       61 cctctctttc ttcatcaaca tgatcatcca ggtctgattc tcatctcgaa gaagttaact
      121 ggttcagaaa actatagtac ctggagaaga tcgatgacta ttgctctcaa tgcaaagaac
      181 aaactgcaaa ttgtgactgg agactacact gaaccatctg cagattcaag aaacaaagca
      241 ctctgggatc gtacaaatga catgatcatc tcttggattc ttaacaccat atctgatcaa
      301 ataggtaact ctttaagctt tgtgaattat gttgctgctt tgtggaaaga actacaagag
      361 aattattctc aacttgatgg ccacagaatt tatcaattat ctaatgacat agctcaattg
      421 aaacaaactg attgcaatgt ggagatatac tatcagaaac tatttgggat gaacttgatg
      481 ctttag
//
LOCUS       XM_071831756            1179 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841547), mRNA.
ACCESSION   XM_071831756
VERSION     XM_071831756.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1179
                     /gene="LOC139841547"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139841547"
     CDS             1..1179
                     /gene="LOC139841547"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687857.1"
                     /db_xref="GeneID:139841547"
                     /translation="MVVVRVFLSVDVHNQWDIAQLDINNAFLHGDIHEEVYMTLPLGQ
                     GFTQSYADTSLLTCNKDSTFLAIIIYVDDLLITGNNPTMILQLKDNLHTTFSIKDLGT
                     INYYLGIEFLKHKDGITMSQRKYALELLNTSDILDQKPSNVPLDLNTKLSADEGTPLE
                     DPSLYRTLVGKLIYLTITRPDLSYAAQALIQFGQNPRTSHLTALYKILRYVKICPGQG
                     LHFPLDTQLKLKAFCDSDWANCPTSRRSITGYCIFLGSCLISWKSKKKKVVSRSSTED
                     EYRALADCTCELMWLQSLLHDFKLINSSPIPIYYDNASAIALAFNPVQHARTKHIETD
                     CHFVRDKIRAGQIATIFIPSPHQVADVLTKSLSKSPHHKCISKFGICDPYTMPPWGGG
                     "
     misc_feature    <7..435
                     /gene="LOC139841547"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    688..1104
                     /gene="LOC139841547"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(700..711,814..822,829..831,931..933,1009..1011,
                     1090..1092)
                     /gene="LOC139841547"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggtggttg ttagggtttt tctatctgtt gatgttcata atcaatggga cattgctcaa
       61 ctagacatta acaatgcatt ccttcatggt gatatccatg aggaggttta catgacccta
      121 ccactaggtc aaggtttcac acagagttat gctgatacat ccctgttaac atgcaacaaa
      181 gattcaactt ttcttgccat catcatctat gtagatgacc tcttgattac tggcaacaat
      241 ccaactatga tacttcaact caaagacaac cttcacacaa cttttagcat caaagacctt
      301 ggtaccatta attactatct tggcatcgaa tttcttaaac acaaagatgg tatcaccatg
      361 tcccaaagaa aatatgcatt ggaacttttg aacacatctg acattttaga tcaaaaaccc
      421 tcaaatgttc ctcttgacct aaacacaaaa ctatcagcag atgaaggtac accacttgaa
      481 gatccctctc tttataggac cttggttggc aaactcattt acctaacaat taccaggcca
      541 gacctttcat atgctgctca agccctcatc caatttggtc aaaacccaag aacaagtcat
      601 ctcacagctc tttataagat cctaagatat gtcaaaattt gtccaggtca agggcttcat
      661 ttcccattag atactcaact gaaactcaag gcattctgtg atagtgactg ggcaaattgt
      721 ccaacctcta gaagatcaat cacagggtat tgtatcttcc taggaagttg ccttatttcc
      781 tggaaatcca aaaagaaaaa agtggtttct agatcctcca cagaggatga gtacagggct
      841 cttgcagact gtacatgtga actcatgtgg ttacaaagtt tactacatga tttcaagctt
      901 atcaactctt caccaattcc catttactat gacaatgcct ctgcaattgc tctggcattt
      961 aatcctgtcc aacatgctcg taccaagcac attgaaactg attgtcactt tgttcgtgat
     1021 aagataaggg ctggtcaaat tgctaccatc ttcatccctt ctccacatca ggttgcagat
     1081 gtccttacca aaagtttgag taaatctcca caccacaagt gtatttctaa gtttggcatt
     1141 tgtgatcctt acacaatgcc accttggggg gggggataa
//
LOCUS       XM_071831757             372 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841548), mRNA.
ACCESSION   XM_071831757
VERSION     XM_071831757.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..372
                     /gene="LOC139841548"
                     /note="uncharacterized LOC139841548; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841548"
     CDS             1..372
                     /gene="LOC139841548"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687858.1"
                     /db_xref="GeneID:139841548"
                     /translation="MSINSSTNLITAEDTNSPNNPLFLHQHDHPGLILISKKLTGSEN
                     YSNWRRSMTIALNAKNKLQIVTGDYTEPSEDSRNKALWYRTNDMIISWILNTISDQIG
                     NSLSFVNSATALCKELQENYS"
     misc_feature    73..219
                     /gene="LOC139841548"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
ORIGIN      
        1 atgtcaatta actcttctac aaatctgatc actgctgaag acactaattc tcctaataat
       61 cctctctttc ttcatcaaca tgatcatcca ggtctgattc tcatctcgaa gaagttaact
      121 ggttcagaaa actatagtaa ctggagaaga tcgatgacta ttgctctcaa tgcaaagaac
      181 aaactgcaaa ttgtgactgg agactacact gaaccatctg aagattcaag aaacaaagca
      241 ctctggtatc gtacaaatga catgatcatc tcttggattc ttaacaccat atctgatcaa
      301 ataggtaact ctttaagctt tgtgaattct gctactgctt tgtgtaagga actacaagag
      361 aattattctt aa
//
LOCUS       XM_071831759             573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841549), mRNA.
ACCESSION   XM_071831759
VERSION     XM_071831759.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..573
                     /gene="LOC139841549"
                     /note="uncharacterized LOC139841549; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841549"
     CDS             1..573
                     /gene="LOC139841549"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687860.1"
                     /db_xref="GeneID:139841549"
                     /translation="MENAYKMFNFIIDDSDDEKVVNFVKSLTEEEVEGEASSSRVPRT
                     RVYIARDREDAAVREHPDAVGRQSLTILQKCTAAIRQMAYGTTPDMFDKYIKIGEKTV
                     ALCLDNFYRCVFHLFAPVYLRKPTADDIARLYNFHAQKHGLPVMLGIIDCMHWQWRNC
                     PIAWQGQYTRGDQKGPSIMLEAVASQDLWI"
     misc_feature    361..>570
                     /gene="LOC139841549"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggaaaatg catacaaaat gttcaatttt atcattgatg attccgatga tgaaaaggtg
       61 gttaattttg ttaagagttt aacggaagaa gaggtggagg gagaagcgag tagttcacga
      121 gtccctcgaa cacgtgttta tattgcaagg gatcgggaag atgcggctgt gagggaacat
      181 ccagatgcag ttggtcgtca aagtttgacg atcctacaaa agtgcaccgc ggccatacgt
      241 caaatggcgt atggaactac accagatatg tttgacaaat acataaaaat tggtgagaaa
      301 acggttgctt tatgtctaga taatttttat agatgtgtat ttcatttgtt tgctcccgtg
      361 tatttgagaa aaccaaccgc cgatgatatt gcccgacttt ataattttca cgcacaaaaa
      421 catggtctac cggttatgct cggtattatt gattgtatgc attggcaatg gaggaattgt
      481 ccaattgctt ggcaaggaca atatacccga ggtgatcaaa aaggcccatc tattatgctt
      541 gaagcagtgg cttctcaaga tttgtggata tga
//
LOCUS       XM_071831760            1065 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139841550), mRNA.
ACCESSION   XM_071831760
VERSION     XM_071831760.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1065
                     /gene="LOC139841550"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139841550"
     CDS             1..1065
                     /gene="LOC139841550"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071687861.1"
                     /db_xref="GeneID:139841550"
                     /translation="MSYTFKEFDYLQIPYDDIVAATNNFDEYNFIFVFSYCNKVYRGE
                     LFRFGKKINVIVEKCENMKEDEILKRVSMLSRFKHKNIATFVGFCYEYGHSYFVTELA
                     VTGINDHIQQIISVSRFKSDSSLYYLYKNLTCYRRLQICLGAARALSHIHEQKAVHGE
                     FNGTRILLDKDLEAKVMCFVIKRRNRIWSDDLDIDPLSENIVTQKTDVYSFGKVLVEM
                     FCERDPILNNQIAFDDDILNQMQSEAFTILNETLYKYLNKHEWCPDMAEIGRLLEKAL
                     FFQWKHEKTQMLPSIYSYVVANLTCPKATGLIEVWRHLNKVENVATKGVLRQASWQSE
                     DSLKPHEDQVEAFMEFLVLL"
     misc_feature    115..831
                     /gene="LOC139841550"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgtcgtata cattcaaaga atttgattac ttacaaatcc cgtatgatga tatagtagct
       61 gcaaccaaca actttgacga gtataacttt attttcgtgt tttcttactg taataaagtc
      121 tacagagggg aactatttcg atttggcaaa aagatcaatg ttattgtaga aaaatgtgaa
      181 aatatgaaag aagacgagat tctaaaacga gtttcgatgc tttcccgttt taaacataaa
      241 aatattgcca cttttgttgg attctgttat gagtacggac atagttactt cgtcacagag
      301 cttgcagtta ccggaattaa cgaccatatc caacagatta tatctgtttc ccgtttcaag
      361 tcagatagta gtttatatta cctctataaa aatctgacgt gttaccgaag attgcaaata
      421 tgtttgggag ctgcacgtgc cttgagtcac atccatgagc aaaaggccgt acatggtgaa
      481 ttcaacggaa ctagaattct tttagataag gatttggagg ctaaggttat gtgttttgtt
      541 ataaagcgta gaaatagaat ttggtctgac gacttggaca ttgacccact gtctgaaaac
      601 attgtgacac agaaaactga tgtgtattct ttcggtaaag ttttagttga aatgttttgt
      661 gagagggacc caatcttgaa caatcaaata gcctttgacg atgacatact caaccaaatg
      721 cagtcagaag cattcaccat tttaaatgaa acactttaca aatacttgaa taaacatgaa
      781 tggtgcccag atatggctga gattgggaga ctacttgaga aggctttatt ttttcaatgg
      841 aaacatgaaa agacccaaat gttaccgtca atttattcct acgtagttgc aaacttgaca
      901 tgcccaaaag ctacaggact tattgaggtg tggagacatt taaacaaagt tgaaaatgtc
      961 gccacaaaag gtgtgttaag gcaagctagt tggcaaagtg aagattcttt gaagccacat
     1021 gaagatcaag ttgaagcttt catggagttt cttgttctcc tataa
//
LOCUS       XM_071831761             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841551), mRNA.
ACCESSION   XM_071831761
VERSION     XM_071831761.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139841551"
                     /note="uncharacterized LOC139841551; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841551"
     CDS             1..780
                     /gene="LOC139841551"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687862.1"
                     /db_xref="GeneID:139841551"
                     /translation="MDAFISKMRKIVEVQNKSIGALAKEIGNVAESKGNREPGTIPSY
                     TVSNLNHKDSEKGHSVNKVGTLRSGKKYDNKVGEKEVAQRNASESPIVFDEEDEESGT
                     EPKPVPFPKALESPNQFPYGKKGPHSEDMWETFKQVKIKFPLLDAIKQVPSYAKFLKD
                     LCTQKRKQRPTLPKKVELTEHLSAVVSGMLPPKFKDPGTPLIAVTIGNVNVKKALLDL
                     GASINILPFCLDDLFELGLMKRTDIIIQLADQLMCVKVYTK"
ORIGIN      
        1 atggacgcgt ttatttccaa aatgcgaaaa atagtggagg tgcaaaacaa gtctattggt
       61 gcattggcta aagaaattgg taatgtagcg gagagcaagg gaaatcggga gccgggtacc
      121 attcctagtt atacagtgtc aaatctaaat cataaggact cggaaaaagg acatagtgta
      181 aacaaggtag gcaccttgcg tagtggaaag aagtatgaca ataaggttgg tgagaaagag
      241 gtagctcaac gcaatgcaag tgagtctcct atcgtttttg atgaggagga tgaggaatcg
      301 ggtacggaac caaaacccgt tccatttccc aaggccttag agtccccgaa ccaattccct
      361 tatgggaaga agggaccaca ttcggaggac atgtgggaaa catttaaaca ggttaaaatt
      421 aaatttcccc ttctcgatgc tattaagcaa gtcccgtcct acgctaagtt tttgaaagac
      481 ctttgcactc aaaagaggaa gcaaaggccg actttaccca agaaggtgga attaaccgag
      541 cacctaagtg cggttgtctc aggtatgctc ccacctaagt ttaaggaccc ggggacccca
      601 ttgatagcgg tgactatagg aaatgtgaat gtgaaaaagg cattattgga cttaggagcg
      661 agcattaata tcttaccctt ttgtctagat gacttatttg agctaggttt aatgaaaaga
      721 actgacataa ttattcaact agcagaccaa ttgatgtgcg taaaggtgta tacgaaatag
//
LOCUS       XM_071831762            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841552), mRNA.
ACCESSION   XM_071831762
VERSION     XM_071831762.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139841552"
                     /note="uncharacterized LOC139841552; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841552"
     CDS             1..1038
                     /gene="LOC139841552"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687863.1"
                     /db_xref="GeneID:139841552"
                     /translation="MIVATVEEGGSCWMTPYMKYLQDGTLLDDVTEARWIKVSAPLYV
                     LENGVLYRKSFNGPNLRCLTPQQAADVVKEMHDVSSAWPFCKWAIDIVGLFPRSVGNA
                     KFLVVAIDFSPNVLKQRYGLPNEIVCDNGKQFADNPFKSWCEELSIKQTFTSVAHPKA
                     NSQVDVTNKEIVAGIKARLGLSQTKRIDEVPYILWAHRTAPKWSTGETPFNLVYGTNA
                     VIPAEICVPTQRVLAFDVEKNSSVLRENLNLLEERRIMAAIRQADAKQRMEKYYNKWV
                     RHVQFREGYLVLRVNEESRQAKQGKMGSRWEGPYKIIKAHPNGSYTLAAPSDEELQRT
                     WNAMSLKKFYA"
     misc_feature    <307..474
                     /gene="LOC139841552"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgatagtag caaccgttga ggaaggagga tcgtgttgga tgactcctta catgaagtat
       61 ttgcaggacg gaacacttct agacgacgtc acagaagcca gatggataaa ggtaagtgct
      121 ccgctctatg tattagagaa tggcgtgctc tacagaaagt cttttaacgg tccaaatttg
      181 aggtgtttaa caccacaaca agctgcagat gtggtgaaag aaatgcatga tgtgtcatct
      241 gcatggccat tttgcaaatg ggcaattgac atagtaggac tttttccaag aagtgttggc
      301 aatgcaaaat ttttggtagt tgcaatcgat ttttcaccaa atgtgttgaa gcaaaggtat
      361 ggtttgccaa atgaaattgt atgtgataat ggtaagcagt ttgcagataa tccatttaaa
      421 agttggtgtg aggagttaag cattaaacaa acattcacct ctgttgctca cccaaaagca
      481 aacagccaag ttgacgttac aaacaaggaa attgtagctg gcataaaggc tagattgggt
      541 ttaagtcaga caaaacggat agatgaagtg ccatatattt tgtgggctca ccgtacagca
      601 cctaaatgga gcacgggtga aacaccgttc aacttggtat atggcactaa cgcagtaata
      661 ccagctgaga tctgtgtgcc aacacaaagg gttttggcat ttgatgtaga aaaaaattca
      721 tcagtcttgc gtgaaaactt gaatttattg gaagaaaggc gtatcatggc cgctatccgt
      781 caagcggatg ctaaacagcg aatggaaaaa tactataata aatgggtcag acatgtacaa
      841 ttcagggaag gttatttggt attgagggtt aatgaagaaa gcagacaagc aaagcaaggg
      901 aagatggggt cacgatggga agggccgtac aaaatcataa aagcacatcc taatggatca
      961 tatacccttg cagcgccctc tgacgaggaa ttacaacgaa catggaatgc aatgagttta
     1021 aagaaatttt atgcgtag
//
LOCUS       XM_071831763             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841553), mRNA.
ACCESSION   XM_071831763
VERSION     XM_071831763.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139841553"
                     /note="uncharacterized LOC139841553; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841553"
     CDS             1..576
                     /gene="LOC139841553"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687864.1"
                     /db_xref="GeneID:139841553"
                     /translation="MAWIKWDQVLNSFSRGGLNIGSLKAFNLALIIKWRWRYLSSSDD
                     MWVKVIKVIHVFFLKIIFIWRLETEEMSFWHDSWCGSSSLVSRFNRLYHLDINRLESV
                     ADKWVEGEWRWVWLREEIGSRNLTSLLNLLQELLNVNVSNREDCWKCSLNGDGLFTVK
                     DTREHIDRSILYSHHVPTSWVKTLPKKVNVF"
ORIGIN      
        1 atggcatgga ttaaatggga tcaagttctc aattcgtttt ctcgaggcgg gttgaacatt
       61 ggtagtttga aggctttcaa tttagcctta attatcaaat ggcggtggcg ttatctttca
      121 tcttcggacg atatgtgggt caaggttatt aaggtcatac atgtgttctt tctcaaaatt
      181 atattcattt ggaggttgga aacggaagaa atgagtttct ggcatgactc gtggtgcggt
      241 tcttcttcgt tagtgtcccg gtttaacagg ttgtaccatc ttgacattaa tagactcgaa
      301 tcagtggcgg ataagtgggt agaaggagaa tggagatggg tttggttaag agaagaaatt
      361 ggtagcagaa acttgacttc attgttgaac ttattacaag aattactgaa cgttaatgtc
      421 tcaaaccgcg aggattgttg gaagtgctct cttaatggag atggtttatt cacggtaaaa
      481 gatacgagag agcacattga tagatctatt ctgtattctc atcatgttcc tacgtcatgg
      541 gtaaagactc tcccaaagaa agtgaatgtt ttttag
//
LOCUS       XM_071831764            1197 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841555), mRNA.
ACCESSION   XM_071831764
VERSION     XM_071831764.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1197
                     /gene="LOC139841555"
                     /note="uncharacterized LOC139841555; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841555"
     CDS             1..1197
                     /gene="LOC139841555"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687865.1"
                     /db_xref="GeneID:139841555"
                     /translation="MYVMLNFEGEDDDNNKYIDDDDRIEDEKFQDDDDLEASSSDGAG
                     AGLILISLEGEEHTYTLHFEVSASNNEAEYEALLSGLRIAEKMGIKALKVSVDSQLVS
                     NQMNEMFEARDPAMQTYLKLAEEMANKFELFSITQVPRSMNKKADAFNKLATSIFSHF
                     TKDVWVEVLSQKSTNVLQEVAPVEEVETWMSPITAYLKHGTLPVNGAAARKIRMKAPF
                     KKFSHDSFRSWCNGLNIKQNFSSVAHPQANGQVEVTNIDIVTGIRARLDTDRKGLVDE
                     LPQVLWVFRTTSKGSNRETPFSLVYGSEALKENLDLLEERRELAAIIYYNRRVKERTF
                     CPGDYVWRNNNASWVEDTGKLGPNWKSSYVVVEALGNGAYNLKTHDGKFVPRTWHATN
                     LKEFYV"
     misc_feature    124..462
                     /gene="LOC139841555"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgtatgtga tgttaaattt tgaaggagaa gatgatgata ataataaata tatagatgat
       61 gatgacagaa tagaggatga gaagtttcaa gatgatgatg atcttgaggc gtcaagttct
      121 gacggggcag gtgcaggtct aattttgatt agtctagaag gcgaggaaca cacttacaca
      181 ttgcatttcg aggtctccgc ctccaacaat gaagccgaat atgaggcgtt gctgtctggt
      241 ttacggatag ctgaaaagat ggggataaag gccctgaaag tgtcggttga ttctcagctt
      301 gtgtcaaatc aaatgaatga gatgtttgag gctagggatc cggccatgca aacatatctg
      361 aaattggcag aagagatggc caacaaattt gaacttttct caatcacgca agtacctcgg
      421 tccatgaaca aaaaggccga cgctttcaac aaacttgcaa cgagcatatt cagtcacttc
      481 accaaggacg tttgggtaga ggtcctaagt caaaaatcca ctaacgtatt acaggaagtg
      541 gctcccgtgg aggaagtcga gacatggatg agtcccatca ctgcgtatct taagcacggg
      601 acgttgccgg ttaacggggc agcagcaaga aagatccgta tgaaagcacc tttcaaaaag
      661 ttttctcatg attcttttcg ctcatggtgc aacggcttga acatcaaaca aaactttagt
      721 tctgttgccc atccgcaagc aaacgggcaa gtcgaagtta ccaacataga cattgttacg
      781 gggattaggg ctaggttgga cacggataga aaaggtttgg tagatgagct tccgcaagtc
      841 ttatgggtgt tccgaaccac atccaaagga agtaacagag aaacgccttt cagccttgtt
      901 tatggctccg aagcgctgaa agaaaattta gacttattgg aagagaggcg tgaactcgcc
      961 gctattatat actataaccg acgtgtaaag gaacgtactt tttgtcccgg cgattatgtg
     1021 tggcgtaata acaatgccag ctgggttgag gatactggca aattgggacc aaattggaag
     1081 agttcgtatg tggttgtcga agctcttggc aatggagcat acaacttgaa gacacatgat
     1141 ggcaagtttg tgccgcgtac ctggcacgca accaatttaa aggagtttta tgtctaa
//
LOCUS       XM_071831765             354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841556), mRNA.
ACCESSION   XM_071831765
VERSION     XM_071831765.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..354
                     /gene="LOC139841556"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139841556"
     CDS             1..354
                     /gene="LOC139841556"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687866.1"
                     /db_xref="GeneID:139841556"
                     /translation="MYLTASLPDIMFATCLCACYQAQPNVNHMLAAKTIMRYLKGTPS
                     LGLWNPRKDAFDLTAFSDSDYGGCKRDFKSTSGGCQFLGSRLISWQCKKQTAIVQSTC
                     EAEYIATASCTSQVV"
     misc_feature    172..>351
                     /gene="LOC139841556"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtatctta cggcatctct cccagatatc atgtttgcaa cgtgcttgtg cgcttgttat
       61 caagcacaac cgaatgtgaa tcatatgtta gcagcgaaga cgatcatgcg ttatctaaag
      121 ggaactccaa gtttgggctt atggaatcca agaaaggatg cgtttgattt aacggcattc
      181 agtgattcgg attacggggg ttgtaagaga gatttcaaat cgacctctgg tggttgtcag
      241 tttctaggta gcaggttgat aagttggcag tgtaagaaac aaacggcaat cgtacaatca
      301 acgtgtgagg ctgaatatat tgctactgca agttgtacat ctcaggtagt ctag
//
LOCUS       XM_071831767            1614 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841557), mRNA.
ACCESSION   XM_071831767
VERSION     XM_071831767.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1614
                     /gene="LOC139841557"
                     /note="uncharacterized LOC139841557; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841557"
     CDS             1..1614
                     /gene="LOC139841557"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687868.1"
                     /db_xref="GeneID:139841557"
                     /translation="MRLSTLLRAQPCGLGLNRTVEVSATRVSSGQFLTGMVDQTRNND
                     APVTPGPGIFRAPSVEHSPKRDPDEYVQQLEGQLQETREKVKELEAQIRHSTIVSEAS
                     DPPIPPGFTGTQYVRWQVVKEKKCTFKQFMDCKPSEYSGHRDPIVTMNWLREVERALK
                     ACQCEPELRVTYASQLLKNRAMVWWDTITTPLSEEQLNQVTWEQFFAKFMDKLRFVHQ
                     WIPDEQSRVQRFVEILRPEYRTIARLATTFSQAHMLAKITESDIKAARMGHEPQDCSF
                     KNNVCWNCHKEGHRSAECPAARKSYSGAWYGSGCKNPPPPEARAFQMLVDTATATDDA
                     ITGMFLVNSMPVRVLFDCGANRSFVSTTFCAKLNVPVRVINEPLSVKVGDGRTVSVTN
                     ARHELAYDHNSSIKCDRKIISFSVAGGKRVVARGDRGRFRCPLLSMMKVQKSLAKGCG
                     SFLAYVIDVKKEKKVVSDILVVSEYPEVFPDELPALPPIREIEYKIELVPGATPVAKA
                     PYRLTPSEICEMMSQIQELLDRGFIRPSS"
     misc_feature    838..885
                     /gene="LOC139841557"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
     misc_feature    952..>1167
                     /gene="LOC139841557"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1051..1053,1057..1059,1063..1065,1138..1146)
                     /gene="LOC139841557"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1051..1059
                     /gene="LOC139841557"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1051..1053
                     /gene="LOC139841557"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1138..1149,1159..1170)
                     /gene="LOC139841557"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcggttga gcacactttt gagggctcaa ccatgcggtt tagggctcaa ccgtacggtt
       61 gaggtctcag ccacacgagt gagcagtgga caatttttga caggtatggt tgaccagacc
      121 agaaataacg atgcccctgt gactcccgga cccggaatat ttagagcgcc gtcagtggag
      181 catagtccga aacgtgatcc agatgagtat gttcaacagt tagaaggtca gttacaggaa
      241 actcgagaaa aagtgaagga actagaggcc caaatcaggc attcaaccat cgtgtctgaa
      301 gctagtgatc caccgatacc cccagggttt actggtactc agtatgtccg ttggcaagtg
      361 gtgaaggaga agaagtgtac gttcaagcag tttatggact gcaagccctc tgagtattcg
      421 ggtcatcgcg atccgattgt gacaatgaat tggctaagag aagttgaacg agcactgaaa
      481 gcctgtcaat gtgaaccaga attgcgggta acttatgcca gccaactgtt aaagaataga
      541 gctatggttt ggtgggatac aattactact ccgttgtccg aagagcaact caatcaggtc
      601 acatgggaac aattttttgc aaagtttatg gacaagttaa ggtttgtgca tcagtggata
      661 cctgacgaac agtcccgagt gcaacggttt gtagaaattt tgcgacctga gtatcgcacg
      721 attgcaagac ttgctacgac tttctcacaa gcgcatatgt tggcaaagat aactgaaagt
      781 gacattaagg cagccagaat ggggcatgag cctcaagatt gttcgtttaa gaataatgtg
      841 tgttggaact gtcataaaga gggtcacaga tctgcagagt gtccagctgc aagaaaaagt
      901 tattccgggg cgtggtatgg gtcagggtgc aagaatcctc caccacctga agctagagcc
      961 tttcagatgt tagtagacac tgccactgct actgatgatg caatcaccgg tatgttctta
     1021 gtaaattcta tgccggttcg agtattattt gactgtggag caaatcgatc gtttgtgtca
     1081 actacattct gtgctaagtt aaatgtgcct gttagggtaa taaatgaacc cttaagtgtc
     1141 aaagtgggtg atggtagaac tgtttcagtc acaaatgcta ggcatgaatt ggcttatgac
     1201 cataattcta gtattaagtg cgataggaaa attatctctt tttcggtggc tggtgggaaa
     1261 cgggtagtgg ctcgtggtga tcgcggccgg ttccgttgtc cattattgtc gatgatgaaa
     1321 gttcagaaat ctttggccaa gggctgtggt tctttcttag cctatgtgat cgatgtaaag
     1381 aaggaaaaga aagtagtgtc cgatattctg gtggtgtctg aatatccaga agtgttccca
     1441 gatgaattgc cagccttacc accgatcagg gaaattgaat ataagattga gttagttcca
     1501 ggggctacgc cggttgctaa agctccgtat agattaactc cttcagaaat ttgtgaaatg
     1561 atgtcccaaa ttcaagaact gttagaccgc gggttcattc gtccgagttc ttag
//
LOCUS       XM_071831768             663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841558), mRNA.
ACCESSION   XM_071831768
VERSION     XM_071831768.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..663
                     /gene="LOC139841558"
                     /note="uncharacterized LOC139841558; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841558"
     CDS             1..663
                     /gene="LOC139841558"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687869.1"
                     /db_xref="GeneID:139841558"
                     /translation="MDPQQQQQLFQNPLYLHSSDGPGSLSIQEKLSGAQNYRSWRRSM
                     EIALSTKRKLGFVTGSVIRPANDFNQTELWDTCNNMVISWIMSSASESIVKSIMFVDT
                     ASAIWKQLEKRFALSNGSRKYKLHKDTYSCDQNGISVSEHYTKMKCIWEEIDSMSELP
                     RVTNVSPEITNFLNALTKQKEEEHLFQFLNGLDEQFSALRSQLLLMSPLPSVEVARSM
                     LQ"
     misc_feature    49..195
                     /gene="LOC139841558"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    247..660
                     /gene="LOC139841558"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggatccac aacagcaaca acaacttttt caaaatccat tgtatttgca ttcgtcagat
       61 ggacctggtt cactttcgat tcaagagaag ctatctggag ctcaaaacta tcgatcatgg
      121 cgtagatcaa tggaaattgc tctatccaca aagcgtaagc tagggtttgt tactggatct
      181 gtaatccgtc cagctaatga ttttaatcag actgaacttt gggatacttg caacaatatg
      241 gtgatcagct ggatcatgag ttctgcttct gaatccatag tgaagtctat tatgtttgtt
      301 gatactgcat ctgctatctg gaagcaattg gagaaaaggt ttgctttaag taatggttcc
      361 agaaaatata aactgcataa agatacatat tcttgtgatc aaaatggcat ttctgttagt
      421 gagcattata ccaaaatgaa gtgtatttgg gaagaaattg actcaatgag tgaactgcct
      481 agggttacta atgtttctcc tgagattact aattttctga atgctttgac aaaacagaag
      541 gaagaagaac atctatttca gtttcttaat ggtttagatg aacaattttc tgctttgagg
      601 agtcagttgt tgctaatgag tcctttacct agtgttgagg tggctcgttc tatgttgcaa
      661 taa
//
LOCUS       XM_071831769             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g67623 (LOC139841559), mRNA.
ACCESSION   XM_071831769
VERSION     XM_071831769.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139841559"
                     /note="putative F-box protein At1g67623; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841559"
     CDS             1..588
                     /gene="LOC139841559"
                     /codon_start=1
                     /product="putative F-box protein At1g67623"
                     /protein_id="XP_071687870.1"
                     /db_xref="GeneID:139841559"
                     /translation="MVEVTQANILETLSQDMLVEIFSRVGQDSSEQLLILKLVCKSFL
                     MLPGDPLVCKRMSLDRWDLRPWRNPKMDYIIRRCLLFGNCNAIFRRGLINYFDKSYTE
                     LGLRLLEKAVNSQIIEAVYVYGLIMFSSHQIEAKHVGLQVLNITFPPVPDLVVAVRTK
                     VFHLLHDLWLFNRRPFDDVATRCPISSHKGYFPHI"
ORIGIN      
        1 atggtagaag ttactcaagc gaacattctc gaaactctat cacaagatat gcttgtggaa
       61 attttttctc gagttggtca ggattcatcc gagcagttgc tcatactcaa gttggtttgc
      121 aaaagctttt tgatgcttcc cggcgatcct ttggtttgta aaaggatgtc cttagatagg
      181 tgggatctca gaccttggag aaaccctaag atggattata ttatccgacg ttgtcttctg
      241 tttggaaact gtaatgcgat ttttcgcagg ggtttgataa attattttga taaatcttac
      301 accgagttag ggcttcgtct tttagaaaaa gctgtgaaca gccaaattat agaggcggtt
      361 tatgtttatg gtttgatcat gttttcctct caccaaatag aagcaaagca tgtcggattg
      421 caagttttga atataacatt cccaccagtg ccggacttgg tggttgcggt gagaaccaag
      481 gtttttcatt tgttgcatga cttatggtta tttaaccgcc gtccttttga tgacgtggca
      541 acgcgttgcc ctatctccag ccacaagggt tattttcccc acatttga
//
LOCUS       XM_071831770            1269 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            serine/threonine/tyrosine-protein kinase HT1-like (LOC139841560),
            mRNA.
ACCESSION   XM_071831770
VERSION     XM_071831770.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1269
                     /gene="LOC139841560"
                     /note="serine/threonine/tyrosine-protein kinase HT1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 20 Proteins"
                     /db_xref="GeneID:139841560"
     CDS             1..1269
                     /gene="LOC139841560"
                     /codon_start=1
                     /product="serine/threonine/tyrosine-protein kinase
                     HT1-like"
                     /protein_id="XP_071687871.1"
                     /db_xref="GeneID:139841560"
                     /translation="MQPTPSGVIVNIDQEHGSDSIEINSDQNTHIERLKSEQEPKGKR
                     LTRGKSMLDFRSPSICSPLPRCFSSTKLHDKRTRKRTPSWSKLFDCVGGRVTSLDVDD
                     YEMVDLSKLFLGFKFAHGAHSQLYHGVYEDENVAVKITRVHDEDEKLAIRLENQFVRE
                     VALLSRLQHQNVIKFVAAGRQPPILCVITEYLSKGSLRAYLHKLEESDVEDKESLSFE
                     KIIRMALDIARGMEYVHSQGIIHRDLKPENILITQDFQLKVADFGISCEEGNCDVVFD
                     DPGTYRWMAPEMIKKTPYGRKVDLYGFGLILWQMLAGTIPYKDMTPIQAAFAVVHTKL
                     RPRIPTECPAAMKSLIEQCWSSNPRKRPEFRQVVKILEEYETLLIHDGNLNLSQCASP
                     LESNSNHQCTQTTRSYNHQMNSPTPKPRFS"
     misc_feature    352..1113
                     /gene="LOC139841560"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(352..363,373..375,406..408,412..414,517..519,
                     565..576,586..588,592..594,727..729,733..735,739..744,
                     748..750,781..783,790..792,835..846)
                     /gene="LOC139841560"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(352..363,373..375,406..408,412..414,517..519,
                     565..576,586..588,727..729,733..735,739..744,748..750,
                     781..783)
                     /gene="LOC139841560"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(361..363,586..588,592..594,727..729,733..735,
                     739..741,790..792,835..846)
                     /gene="LOC139841560"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(778..804,835..846)
                     /gene="LOC139841560"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
ORIGIN      
        1 atgcaaccta ccccttctgg cgttattgta aatatcgatc aagaacatgg tagcgatagt
       61 attgagataa attctgatca aaacacgcat atcgaaagac taaaaagtga acaagaacct
      121 aaaggtaaaa ggttaacgcg tggaaagtca atgcttgatt ttaggtcacc ttcgatatgt
      181 tctcctcttc caagatgttt tagttcaaca aagcttcatg acaaaagaac aaggaaaagg
      241 acgccttctt ggtcgaagtt atttgattgt gttggaggaa gagttacttc attagacgta
      301 gatgattatg aaatggttga tctttcaaaa ctttttcttg ggtttaaatt tgctcatggg
      361 gcacatagtc agctttacca tggagtgtac gaagatgaaa acgttgcagt taagattacg
      421 agggtgcatg atgaagatga aaaactagca attcggttag aaaatcaatt tgttcgagaa
      481 gttgctcttt tatctcgtct ccaacaccaa aatgtcatca agtttgtagc agcgggtaga
      541 caaccaccta tcttgtgtgt tatcaccgaa tatctttcaa agggttcgtt gagggcttac
      601 ttgcataaac ttgaggagag tgacgtagaa gacaaagaga gtctatcttt tgaaaagatt
      661 attaggatgg ctttagatat tgctcgtggc atggaatatg ttcattcaca aggcattatt
      721 catagggatt tgaagcccga aaacatacta ataacacaag attttcagtt aaaggttgct
      781 gattttggaa taagttgtga agaggggaat tgtgatgttg tattcgatga tccaggaact
      841 tatcgttgga tggcacccga gatgatcaaa aagactccgt atggccgtaa ggttgaccta
      901 tacggatttg gactcatttt atggcaaatg ttggccggga ccatacccta taaagatatg
      961 acccctattc aggcagcttt tgctgtcgtg catacgaaac tacgaccgcg tattccaact
     1021 gaatgtcctg cggctatgaa aagtttaata gagcaatgtt ggtcttctaa tccacgcaaa
     1081 aggcctgaat tccggcaagt tgtgaagatt ttagaagagt atgaaacatt acttattcat
     1141 gatggaaact tgaatctttc acaatgtgca tcgcctttag aaagcaacag caatcatcaa
     1201 tgtacacaaa cgactcgttc ctataatcat caaatgaact cgcctacccc taaaccgagg
     1261 ttctcttaa
//
LOCUS       XM_071831771            1605 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841561), mRNA.
ACCESSION   XM_071831771
VERSION     XM_071831771.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1605
                     /gene="LOC139841561"
                     /note="uncharacterized LOC139841561; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841561"
     CDS             1..1605
                     /gene="LOC139841561"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687872.1"
                     /db_xref="GeneID:139841561"
                     /translation="MTGIPRHIAEHRLNVNPALKPVVQKCRGMASDHAKWLCEEVTKL
                     MKAGILREVQYQSWIANPILVKKTDGSWRMCIDYKDLNKAFPKDNYPLPEIDLKVDFV
                     WTSEAETAFQELKKLLKTLPTLTAPIDGETLYLYILVANEAFGSVLVAERDKIQKPMY
                     FVSKALTGSEINYAPIEKFVYALILTSRRLRRYFQGHPVHVLTNMLVKQVLTKPEISG
                     RLALWVVELGAYQISYLPRNAIKGQVLADYLAEMTGELEVVIERTELKPIISETWDLF
                     TDGASCAEGAGAGLVLVSPIGEEHTYVLRFNFDVTNNEAEYEALLAGLNIARKMNITN
                     LRLLKELDLRFEHFELAQVPRSQNKKADALSKLAALTHSHFQKQVWVEEFPSKSIDND
                     LMVASVIEEQPNWMEPILQYIRNDVLPNDKREARLVRERAPMYIIQNDILYRKSYCGP
                     MMRCVGPIEAEIIIDEVHNGSCALHSGYKTIAAKIMRMGYFWPSLYHDVAKIVKRYKS
                     CQRHASQNRMPRHDMVPINSPWPFHK"
     misc_feature    142..>300
                     /gene="LOC139841561"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    307..603
                     /gene="LOC139841561"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    817..1107
                     /gene="LOC139841561"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(832..843,931..939,946..948,1054..1056,1096..1098)
                     /gene="LOC139841561"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    1387..1545
                     /gene="LOC139841561"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgactggta ttccgcgtca tattgcagaa cacagactga atgtgaatcc agctttaaaa
       61 cctgtagtgc agaagtgtcg aggcatggcc tcagatcacg ctaagtggct gtgcgaagag
      121 gtaacaaaat tgatgaaagc tggaatttta cgcgaagttc aatatcaatc atggattgcg
      181 aatccaattt tggtgaaaaa gactgatggc tcgtggagaa tgtgtattga ttacaaggat
      241 ttaaataaag cgttccctaa ggataactat ccacttccag aaattgattt gaaagtggac
      301 tttgtttgga caagcgaagc tgaaaccgcg tttcaggaac taaagaagtt attgaaaact
      361 ttgcctacgt taacagcgcc aatcgatggc gaaactcttt acctttatat attggtagca
      421 aatgaagctt ttggctcagt tttagttgcg gaaagggata aaatacaaaa acctatgtat
      481 tttgtcagta aagctcttac aggaagcgaa ataaactatg cgcccattga aaaatttgtg
      541 tatgcactca tattaacatc gcgaaggtta agaaggtatt ttcaagggca tccagtacat
      601 gtgctaacta acatgctggt caagcaagtc ttaacaaaac cagagatatc tggtaggctg
      661 gcgttgtggg tggtagaatt aggtgcttat caaatttctt accttccgcg caatgctata
      721 aagggtcaag ttttggcaga ttatctcgca gaaatgactg gggagttgga agtggttatt
      781 gagcgaaccg aattaaagcc aataattagc gaaacatggg atttatttac tgatggcgcc
      841 tcatgtgcag aaggggctgg tgcgggttta gtgttagtaa gcccaatagg tgaggagcat
      901 acgtacgtat tacgttttaa ttttgatgta acaaataatg aagcggaata tgaagcattg
      961 cttgctggtt taaatatagc gcgtaaaatg aatatcacca atttgcgatt gttgaaagaa
     1021 ttagatttgc ggtttgagca ttttgaactc gcacaagtac caaggagtca aaataagaag
     1081 gcggatgctt tgagtaagtt ggctgcttta acgcattcgc actttcaaaa acaagtttgg
     1141 gtcgaggaat ttccaagcaa atcaatagat aacgatttaa tggtggcgtc cgttatagaa
     1201 gaacagccaa attggatgga accaatcttg caatatatcc gcaatgatgt tttgccaaat
     1261 gataagcgtg aagctcgttt agtcagagag cgagcaccaa tgtacatcat tcaaaatgac
     1321 attttgtatc gtaagtcata ttgtggtcca atgatgcgat gtgtgggccc aattgaagca
     1381 gaaataataa ttgatgaagt gcataatggt tcttgcgcat tgcattcagg ctataaaact
     1441 attgcggcga aaattatgcg gatgggttac ttttggccat ccctatatca cgatgttgca
     1501 aagattgtta agcgttacaa aagctgccaa aggcatgctt cacagaatcg gatgccaaga
     1561 catgatatgg tccctattaa ttcgccatgg ccatttcaca agtga
//
LOCUS       XM_071831772            3283 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841562), transcript variant X1, mRNA.
ACCESSION   XM_071831772
VERSION     XM_071831772.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3283
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3283
                     /gene="LOC139841562"
                     /note="uncharacterized LOC139841562; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841562"
     CDS             1963..2592
                     /gene="LOC139841562"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071687873.1"
                     /db_xref="GeneID:139841562"
                     /translation="MGQKGYKLFDIKSEKKCVSMNVTFVEDKFPFDVKYEGHKTLEKE
                     HLYEFLPQIQSMCDDHIVNSEEHQSNESENIIDVAPPQSGEPNDQSGVQTSSINDHMG
                     TTTDEHVNINMRGENLRMSTRTKTKPKHLSEYITKLPPSLEHDHPIPNSDSSTSNTAM
                     VYPLSHYVAYDKFSKSHRSFLAAITSHDEPKLLSRLRINLNGEKLCSKK"
ORIGIN      
        1 aataggcggt gacacttttt tgagatttgt tgtttccctt gataaataaa cacaattact
       61 taaatttaac ccattcacct caataggttc attaaaaaac taccttcttc gcagtagtag
      121 ctcaccaggc gagaaccttc ttaaagatag caattacagt gattggaaaa acgagatgac
      181 gaatgcattg ttagcgaaga acaaaattgg tttcatcgat ggaacaattc ctatgccacc
      241 agaaggatcc aaagacttaa tgaactggag aaggtgtaat gcaatggtta aagggtggct
      301 tgtaaattca atggataaag aaattaagat gagtgtgaaa tacgctgtta cagcacgtga
      361 tatctggaca gatttacaag aacgttttga taaagagaat gcaccacgtg cataagagct
      421 acaaaggtcc atcaccatga tctaccaaaa caatcaaacg atatcctctt attacacaaa
      481 attaagatcg gtgtgggatg aaatcgcatc agttagccca atcccaacct gcacttgcaa
      541 cacctgtaca tgtgaattat caaaagccat aggaaagatg cgtgataaag agaggcttta
      601 tgatttcctt atgggattaa acaatgaata caatggaatc cgatcacaaa tccttaatag
      661 tgatccacta ccctccgttg tagctgcttt tcacttagta aatcaagatg agcagcaacg
      721 tcaagttgga gctatacgaa gcaccactgt ggacgcatca gccttccaga cacatacaaa
      781 gagcgctcaa aagagcacaa gaaaattcaa tacaaacact tacaggaagg aggatcgtga
      841 aacagaagaa aagtcttgca cttactgtca aaagaatgga catacagtgg atggttgctt
      901 tgaaattgtc gggtatcctg aatagtggac gaagaaatct tcaagtttta agtcgagtaa
      961 accaagaagt ttcaaagctg caatagttcc agaggaaaag cagaactcaa ttttaaccag
     1021 agaggactat gaaaagctga tgcagttgtt gagaatatca caaacgaagg aatcttcaac
     1081 ttcagccaac atgacaggac ttacgttcga ggaacctgat tgagatgagt gagcaacgtg
     1141 atggattgta ctacttgaag ccattcaaat ggatgacttt ggctatggct gcttttaaac
     1201 aacaagaaat ttggcatcga cttttgggac atgcttcgga tagtgttctt aagaaactga
     1261 aacatctagg tagttttgac ttacataacc acttttgcga ttcatgtatt cgagctaaac
     1321 aaattcgctt accttttcca cttagcttct ctaaaaccat tgcttgtttc gatttaatac
     1381 atatagatat ttgggtaaat atcaacatgc ttcgttaaat gtgctcatta ttttctatct
     1441 attgttgatg atcatagtag gggtgtttgg gtttatttaa tgcgtgcaaa atctgaggtt
     1501 ggacatttaa tcaccacgtt ttataacatg gtaaaagctc aatttaacaa atgcataaaa
     1561 agaataaggc ggacaatgga acagagtttc aatctaacta catgttggat ttttataaag
     1621 aaaatgggtt atttttaaaa catcgtgtcc ctacacaccg caacaaaatg gtgtggtgga
     1681 acgaaaacat agacacttgt tggagatgag tcgggccctt aggtttgaag cttcattacc
     1741 aatagagttt tgggggattg tgttctcacg gcggcttaca ttataaagaa gcttcctagt
     1801 cgagcgttag atcacaagac accccacgag atacttctta ggaaattacc aacctacgat
     1861 cacttgaagg tctttggatg tttggcgtat gtacatgata ctttttataa acaaaacaag
     1921 ttcggtgaaa aggggagacc ttgcgttttc ttgagttatc caatggggca aaagggatac
     1981 aagttatttg atataaaaag tgagaagaag tgtgttagta tgaatgtcac ttttgttgag
     2041 gataagtttc ctttcgatgt caagtatgaa ggtcataaaa ccttagagaa ggaacacttg
     2101 tatgagtttt tacctcaaat acaaagcatg tgtgatgatc atattgtgaa cagtgaggag
     2161 catcaaagta atgaaagtga aaacataatt gatgttgcac caccacaaag tggagagcct
     2221 aatgatcaaa gtggagttca aacatcatca attaatgatc atatgggaac tacaacagat
     2281 gagcatgtga atattaatat gcgtggtgag aatctacgaa tgagcacacg gacaaaaaca
     2341 aaaccaaaac atctttctga atacatcaca aaattgccac catcactcga gcatgatcat
     2401 cccattccca actcagattc ttccacgtcc aacactgcca tggtatatcc tctttctcac
     2461 tatgttgctt atgataaatt ttcaaaatct catcgttctt tcttagcggc catcacatcc
     2521 catgatgagc caaaactttt aagcaggctg cgcataaatc tgaatggaga gaagctatgc
     2581 tcaaagaaat aaaggcccta gaagaaaata aaatgtgggt cattaccgag ttaccgtagg
     2641 ggaagaaacc tattgattca aaatgggttt ataaaatcaa atacaaacca aatggagaaa
     2701 ttgagagata caaggctcgt ttggttgcga aagaatacac tcaaattgag ggatagattt
     2761 tcatgagacg ttcgcgtcgg tagcaaaatt agttactgta cgatgcgcgt tggaagtagt
     2821 gacaaagaga gattggcata tacatcaaat ggatgtaaat aatgctttct tacaaggaga
     2881 tcttgatgaa gaaatctaca tgaagttacc tccaggatat gtaaaattaa atgagaatag
     2941 agtttgtaaa ttgcaaaaat ctatatatgg tctacgacaa gcttaaagaa attggtatca
     3001 caagttaacc aaggtgttga ttgctatcgg ttttaatcag tccaaggcgg atcactcaat
     3061 gtttgtttta cgacaaggag aaactcgtct catcgcattg atttatgttg atgatatact
     3121 ccttatggga aaagacctta aaagaattaa agaaatcaaa gttcatcttc ataataattt
     3181 ttctataaaa gacttggggt cattgaatta ttttcttgga atcgaagttt ctcagtcaaa
     3241 agaaggaatt gtcataagtc aacgtaagta taccttagac att
//
LOCUS       XM_071831773            3652 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841562), transcript variant X2, mRNA.
ACCESSION   XM_071831773
VERSION     XM_071831773.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3652
                     /gene="LOC139841562"
                     /note="uncharacterized LOC139841562; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841562"
     CDS             2332..2961
                     /gene="LOC139841562"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071687874.1"
                     /db_xref="GeneID:139841562"
                     /translation="MGQKGYKLFDIKSEKKCVSMNVTFVEDKFPFDVKYEGHKTLEKE
                     HLYEFLPQIQSMCDDHIVNSEEHQSNESENIIDVAPPQSGEPNDQSGVQTSSINDHMG
                     TTTDEHVNINMRGENLRMSTRTKTKPKHLSEYITKLPPSLEHDHPIPNSDSSTSNTAM
                     VYPLSHYVAYDKFSKSHRSFLAAITSHDEPKLLSRLRINLNGEKLCSKK"
ORIGIN      
        1 gatcccataa ccaaaattaa acccaaattt tctaccggtt atacgtaccg atcccgaaat
       61 ttgtccaacc taattcaata caccaatccc taaaatcacg aattcaaatc ggttatacat
      121 actgatcata aaactcacaa attttcatca tcattcaaac ttgcaatcaa atcatcaaaa
      181 cccaacaatt caaaccctaa attgcgaata tgacagggag tgcattggaa agtagcaata
      241 ccaccataga catctcttct ccttatttct tgacatcgtc cgaccatcca tgacaaaatt
      301 ttgtaggcga gaaccttctt aaagatagca attacagtga ttggaaaaac gagatgacga
      361 atgcattgtt agcgaagaac aaaattggtt tcatcgatgg aacaattcct atgccaccag
      421 aaggatccaa agacttaatg aactggagaa ggtgtaatgc aatggttaaa gggtggcttg
      481 taaattcaat ggataaagaa attaagatga gtgtgaaata cgctgttaca gcacgtgata
      541 tctggacaga tttacaagaa cgttttgata aagagaatgc accacgtgca taagagctac
      601 aaaggtccat caccatgatc taccaaaaca atcaaacgat atcctcttat tacacaaaat
      661 taagatcggt gtgggatgaa atcgcatcag ttagcccaat cccaacctgc acttgcaaca
      721 cctgtacatg tgaattatca aaagccatag gaaagatgcg tgataaagag aggctttatg
      781 atttccttat gggattaaac aatgaataca atggaatccg atcacaaatc cttaatagtg
      841 atccactacc ctccgttgta gctgcttttc acttagtaaa tcaagatgag cagcaacgtc
      901 aagttggagc tatacgaagc accactgtgg acgcatcagc cttccagaca catacaaaga
      961 gcgctcaaaa gagcacaaga aaattcaata caaacactta caggaaggag gatcgtgaaa
     1021 cagaagaaaa gtcttgcact tactgtcaaa agaatggaca tacagtggat ggttgctttg
     1081 aaattgtcgg gtatcctgaa tagtggacga agaaatcttc aagttttaag tcgagtaaac
     1141 caagaagttt caaagctgca atagttccag aggaaaagca gaactcaatt ttaaccagag
     1201 aggactatga aaagctgatg cagttgttga gaatatcaca aacgaaggaa tcttcaactt
     1261 cagccaacat gacaggtaca attaatccaa agaatacatg gattattgat tcaggtacaa
     1321 gtgagcacat aactcatcgg tcagactgtt tggaatgtac gaacacgcag gagaaattct
     1381 tacccgtgac tataccagat ggaagttccg tacctgtaaa aggagttggt aatatctaat
     1441 tacacggagg gtgtaatttg aaacatgact tacgttcgag gaacctgatt gagatgagtg
     1501 agcaacgtga tggattgtac tacttgaagc cattcaaatg gatgactttg gctatggctg
     1561 cttttaaaca acaagaaatt tggcatcgac ttttgggaca tgcttcggat agtgttctta
     1621 agaaactgaa acatctaggt agttttgact tacataacca cttttgcgat tcatgtattc
     1681 gagctaaaca aattcgctta ccttttccac ttagcttctc taaaaccatt gcttgtttcg
     1741 atttaataca tatagatatt tgggtaaata tcaacatgct tcgttaaatg tgctcattat
     1801 tttctatcta ttgttgatga tcatagtagg ggtgtttggg tttatttaat gcgtgcaaaa
     1861 tctgaggttg gacatttaat caccacgttt tataacatgg taaaagctca atttaacaaa
     1921 tgcataaaaa gaataaggcg gacaatggaa cagagtttca atctaactac atgttggatt
     1981 tttataaaga aaatgggtta tttttaaaac atcgtgtccc tacacaccgc aacaaaatgg
     2041 tgtggtggaa cgaaaacata gacacttgtt ggagatgagt cgggccctta ggtttgaagc
     2101 ttcattacca atagagtttt gggggattgt gttctcacgg cggcttacat tataaagaag
     2161 cttcctagtc gagcgttaga tcacaagaca ccccacgaga tacttcttag gaaattacca
     2221 acctacgatc acttgaaggt ctttggatgt ttggcgtatg tacatgatac tttttataaa
     2281 caaaacaagt tcggtgaaaa ggggagacct tgcgttttct tgagttatcc aatggggcaa
     2341 aagggataca agttatttga tataaaaagt gagaagaagt gtgttagtat gaatgtcact
     2401 tttgttgagg ataagtttcc tttcgatgtc aagtatgaag gtcataaaac cttagagaag
     2461 gaacacttgt atgagttttt acctcaaata caaagcatgt gtgatgatca tattgtgaac
     2521 agtgaggagc atcaaagtaa tgaaagtgaa aacataattg atgttgcacc accacaaagt
     2581 ggagagccta atgatcaaag tggagttcaa acatcatcaa ttaatgatca tatgggaact
     2641 acaacagatg agcatgtgaa tattaatatg cgtggtgaga atctacgaat gagcacacgg
     2701 acaaaaacaa aaccaaaaca tctttctgaa tacatcacaa aattgccacc atcactcgag
     2761 catgatcatc ccattcccaa ctcagattct tccacgtcca acactgccat ggtatatcct
     2821 ctttctcact atgttgctta tgataaattt tcaaaatctc atcgttcttt cttagcggcc
     2881 atcacatccc atgatgagcc aaaactttta agcaggctgc gcataaatct gaatggagag
     2941 aagctatgct caaagaaata aaggccctag aagaaaataa aatgtgggtc attaccgagt
     3001 taccgtaggg gaagaaacct attgattcaa aatgggttta taaaatcaaa tacaaaccaa
     3061 atggagaaat tgagagatac aaggctcgtt tggttgcgaa agaatacact caaattgagg
     3121 gatagatttt catgagacgt tcgcgtcggt agcaaaatta gttactgtac gatgcgcgtt
     3181 ggaagtagtg acaaagagag attggcatat acatcaaatg gatgtaaata atgctttctt
     3241 acaaggagat cttgatgaag aaatctacat gaagttacct ccaggatatg taaaattaaa
     3301 tgagaataga gtttgtaaat tgcaaaaatc tatatatggt ctacgacaag cttaaagaaa
     3361 ttggtatcac aagttaacca aggtgttgat tgctatcggt tttaatcagt ccaaggcgga
     3421 tcactcaatg tttgttttac gacaaggaga aactcgtctc atcgcattga tttatgttga
     3481 tgatatactc cttatgggaa aagaccttaa aagaattaaa gaaatcaaag ttcatcttca
     3541 taataatttt tctataaaag acttggggtc attgaattat tttcttggaa tcgaagtttc
     3601 tcagtcaaaa gaaggaattg tcataagtca acgtaagtat accttagaca tt
//
LOCUS       XM_071831774            3270 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841562), transcript variant X3, mRNA.
ACCESSION   XM_071831774
VERSION     XM_071831774.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3270
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3270
                     /gene="LOC139841562"
                     /note="uncharacterized LOC139841562; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841562"
     CDS             1950..2579
                     /gene="LOC139841562"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071687875.1"
                     /db_xref="GeneID:139841562"
                     /translation="MGQKGYKLFDIKSEKKCVSMNVTFVEDKFPFDVKYEGHKTLEKE
                     HLYEFLPQIQSMCDDHIVNSEEHQSNESENIIDVAPPQSGEPNDQSGVQTSSINDHMG
                     TTTDEHVNINMRGENLRMSTRTKTKPKHLSEYITKLPPSLEHDHPIPNSDSSTSNTAM
                     VYPLSHYVAYDKFSKSHRSFLAAITSHDEPKLLSRLRINLNGEKLCSKK"
ORIGIN      
        1 gatcccataa ccaaaattaa acccaaattt tctaccggtt atacgtaccg atcccgaaat
       61 ttgtccaacc taattcaata caccaatccc taaaatcacg aattcaaatc ggttatacat
      121 actgatcata aaactcacaa attttcatca tcattcaaac ttgcaatcaa atcatcaaaa
      181 cccaacaatt caaaccctaa attgcgaata tgacagggag tgcattggaa agtagcaata
      241 ccaccataga catctcttct ccttatttct tgacatcgtc cgaccatcca tgacaaaatt
      301 ttgtaggcga gaaccttctt aaagatagca attacagtga ttggaaaaac gagatgacga
      361 atgcattgtt agcgaagaac aaaattggtt tcatcgatgg aacaattcct atgccaccag
      421 aaggatccaa agacttaatg aactggagaa ggtgtaatgc aatggttaaa gggtggcttg
      481 taaattcaat ggataaagaa attaagatga gtgtgaaata cgctgttaca gcacgtgata
      541 tctggacaga tttacaagaa cgttttgata aagagaatgc accacgtgca taagagctac
      601 aaaggtccat caccatgatc taccaaaaca atcaaacgat atcctcttat tacacaaaat
      661 taagatcggt gtgggatgaa atcgcatcag ttagcccaat cccaacctgc acttgcaaca
      721 cctgtacatg tgaattatca aaagccatag gaaagatgcg tgataaagag aggctttatg
      781 atttccttat gggattaaac aatgaataca atggaatccg atcacaaatc cttaatagtg
      841 atccactacc ctccgttgta gctgcttttc acttagtaaa tcaagatgag cagcaacgtc
      901 aagttggagc tatacgaagc accactgtgg acgcatcagc cttccagaca catacaaaga
      961 gcgctcaaaa gagcacaaga aaattcaata caaacactta caggaaggag gatcgtgaaa
     1021 cagaagaaaa gtcttgcact tactgtcaaa agaatggaca tacagtggat ggttgctttg
     1081 aaattgtcgg gtatcctgaa tagtggacga agaaatcttc aagttttaag tcgagtaaac
     1141 caagaagttt caaagctgca atagttccag aggaaaagca gaactcaatt ttaaccagag
     1201 aggactatga aaagctgatg cagttgttga gaatatcaca aacgaaggaa tcttcaactt
     1261 cagccaacat gacaggactt acgttcgagg aacctgattg agatgagtga gcaacgtgat
     1321 ggattgtact acttgaagcc attcaaatgg atgactttgg ctatggctgc ttttaaacaa
     1381 caagaaattt ggcatcgact tttgggacat gcttcggata gtgttcttaa gaaactgaaa
     1441 catctagggg tgtttgggtt tatttaatgc gtgcaaaatc tgaggttgga catttaatca
     1501 ccacgtttta taacatggta aaagctcaat ttaacaaatg cataaaaaga ataaggcgga
     1561 caatggaaca gagtttcaat ctaactacat gttggatttt tataaagaaa atgggttatt
     1621 tttaaaacat cgtgtcccta cacaccgcaa caaaatggtg tggtggaacg aaaacataga
     1681 cacttgttgg agatgagtcg ggcccttagg tttgaagctt cattaccaat agagttttgg
     1741 gggattgtgt tctcacggcg gcttacatta taaagaagct tcctagtcga gcgttagatc
     1801 acaagacacc ccacgagata cttcttagga aattaccaac ctacgatcac ttgaaggtct
     1861 ttggatgttt ggcgtatgta catgatactt tttataaaca aaacaagttc ggtgaaaagg
     1921 ggagaccttg cgttttcttg agttatccaa tggggcaaaa gggatacaag ttatttgata
     1981 taaaaagtga gaagaagtgt gttagtatga atgtcacttt tgttgaggat aagtttcctt
     2041 tcgatgtcaa gtatgaaggt cataaaacct tagagaagga acacttgtat gagtttttac
     2101 ctcaaataca aagcatgtgt gatgatcata ttgtgaacag tgaggagcat caaagtaatg
     2161 aaagtgaaaa cataattgat gttgcaccac cacaaagtgg agagcctaat gatcaaagtg
     2221 gagttcaaac atcatcaatt aatgatcata tgggaactac aacagatgag catgtgaata
     2281 ttaatatgcg tggtgagaat ctacgaatga gcacacggac aaaaacaaaa ccaaaacatc
     2341 tttctgaata catcacaaaa ttgccaccat cactcgagca tgatcatccc attcccaact
     2401 cagattcttc cacgtccaac actgccatgg tatatcctct ttctcactat gttgcttatg
     2461 ataaattttc aaaatctcat cgttctttct tagcggccat cacatcccat gatgagccaa
     2521 aacttttaag caggctgcgc ataaatctga atggagagaa gctatgctca aagaaataaa
     2581 ggccctagaa gaaaataaaa tgtgggtcat taccgagtta ccgtagggga agaaacctat
     2641 tgattcaaaa tgggtttata aaatcaaata caaaccaaat ggagaaattg agagatacaa
     2701 ggctcgtttg gttgcgaaag aatacactca aattgaggga tagattttca tgagacgttc
     2761 gcgtcggtag caaaattagt tactgtacga tgcgcgttgg aagtagtgac aaagagagat
     2821 tggcatatac atcaaatgga tgtaaataat gctttcttac aaggagatct tgatgaagaa
     2881 atctacatga agttacctcc aggatatgta aaattaaatg agaatagagt ttgtaaattg
     2941 caaaaatcta tatatggtct acgacaagct taaagaaatt ggtatcacaa gttaaccaag
     3001 gtgttgattg ctatcggttt taatcagtcc aaggcggatc actcaatgtt tgttttacga
     3061 caaggagaaa ctcgtctcat cgcattgatt tatgttgatg atatactcct tatgggaaaa
     3121 gaccttaaaa gaattaaaga aatcaaagtt catcttcata ataatttttc tataaaagac
     3181 ttggggtcat tgaattattt tcttggaatc gaagtttctc agtcaaaaga aggaattgtc
     3241 ataagtcaac gtaagtatac cttagacatt
//
LOCUS       XM_071831775            3582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841562), transcript variant X4, mRNA.
ACCESSION   XM_071831775
VERSION     XM_071831775.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3582
                     /gene="LOC139841562"
                     /note="uncharacterized LOC139841562; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841562"
     CDS             2262..2891
                     /gene="LOC139841562"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071687876.1"
                     /db_xref="GeneID:139841562"
                     /translation="MGQKGYKLFDIKSEKKCVSMNVTFVEDKFPFDVKYEGHKTLEKE
                     HLYEFLPQIQSMCDDHIVNSEEHQSNESENIIDVAPPQSGEPNDQSGVQTSSINDHMG
                     TTTDEHVNINMRGENLRMSTRTKTKPKHLSEYITKLPPSLEHDHPIPNSDSSTSNTAM
                     VYPLSHYVAYDKFSKSHRSFLAAITSHDEPKLLSRLRINLNGEKLCSKK"
ORIGIN      
        1 gatcccataa ccaaaattaa acccaaattt tctaccggtt atacgtaccg atcccgaaat
       61 ttgtccaacc taattcaata caccaatccc taaaatcacg aattcaaatc ggttatacat
      121 actgatcata aaactcacaa attttcatca tcattcaaac ttgcaatcaa atcatcaaaa
      181 cccaacaatt caaaccctaa attgcgaata tgacagggag tgcattggaa agtagcaata
      241 ccaccataga catctcttct ccttatttct tgacatcgtc cgaccatcca tgacaaaatt
      301 ttgtaggcga gaaccttctt aaagatagca attacagtga ttggaaaaac gagatgacga
      361 atgcattgtt agcgaagaac aaaattggtt tcatcgatgg aacaattcct atgccaccag
      421 aaggatccaa agacttaatg aactggagaa ggtgtaatgc aatggttaaa gggtggcttg
      481 taaattcaat ggataaagaa attaagatga gtgtgaaata cgctgttaca gcacgtgata
      541 tctggacaga tttacaagaa cgttttgata aagagaatgc accacgtgca taagagctac
      601 aaaggtccat caccatgatc taccaaaaca atcaaacgat atcctcttat tacacaaaat
      661 taagatcggt gtgggatgaa atcgcatcag ttagcccaat cccaacctgc acttgcaaca
      721 cctgtacatg tgaattatca aaagccatag gaaagatgcg tgataaagag aggctttatg
      781 atttccttat gggattaaac aatgaataca atggaatccg atcacaaatc cttaatagtg
      841 atccactacc ctccgttgta gctgcttttc acttagtaaa tcaagatgag cagcaacgtc
      901 aagttggagc tatacgaagc accactgtgg acgcatcagc cttccagaca catacaaaga
      961 gcgctcaaaa gagcacaaga aaattcaata caaacactta caggaaggag gatcgtgaaa
     1021 cagaagaaaa gtcttgcact tactgtcaaa agaatggaca tacagtggat ggttgctttg
     1081 aaattgtcgg gtatcctgaa tagtggacga agaaatcttc aagttttaag tcgagtaaac
     1141 caagaagttt caaagctgca atagttccag aggaaaagca gaactcaatt ttaaccagag
     1201 aggactatga aaagctgatg cagttgttga gaatatcaca aacgaaggaa tcttcaactt
     1261 cagccaacat gacaggagaa attcttaccc gtgactatac cagatggaag ttccgtacct
     1321 gtaaaaggag ttggtaatat ctaattacac ggagggtgta atttgaaaca tgtattaaac
     1381 gtgccaagtt tcacatgact tacgttcgag gaacctgatt gagatgagtg agcaacgtga
     1441 tggattgtac tacttgaagc cattcaaatg gatgactttg gctatggctg cttttaaaca
     1501 acaagaaatt tggcatcgac ttttgggaca tgcttcggat agtgttctta agaaactgaa
     1561 acatctaggt agttttgact tacataacca cttttgcgat tcatgtattc gagctaaaca
     1621 aattcgctta ccttttccac ttagcttctc taaaaccatt gcttgtttcg atttaataca
     1681 tatagatatt tgggtaaata tcaacatgct tcgttaaatg tgctcattat tttctatcta
     1741 ttgttgatga tcatagtagg ggtgtttggg tttatttaat gcgtgcaaaa tctgaggttg
     1801 gacatttaat caccacgttt tataacatgg taaaagctca atttaacaaa tgcataaaaa
     1861 gaataaggcg gacaatggaa cagagtttca atctaactac atgttggatt tttataaaga
     1921 aaatgggtta tttttaaaac atcgtgtccc tacacaccgc aacaaaatgg tgtggtggaa
     1981 cgaaaacata gacacttgtt ggagatgagt cgggccctta ggtttgaagc ttcattacca
     2041 atagagtttt gggggattgt gttctcacgg cggcttacat tataaagaag cttcctagtc
     2101 gagcgttaga tcacaagaca ccccacgaga tacttcttag gaaattacca acctacgatc
     2161 acttgaaggt ctttggatgt ttggcgtatg tacatgatac tttttataaa caaaacaagt
     2221 tcggtgaaaa ggggagacct tgcgttttct tgagttatcc aatggggcaa aagggataca
     2281 agttatttga tataaaaagt gagaagaagt gtgttagtat gaatgtcact tttgttgagg
     2341 ataagtttcc tttcgatgtc aagtatgaag gtcataaaac cttagagaag gaacacttgt
     2401 atgagttttt acctcaaata caaagcatgt gtgatgatca tattgtgaac agtgaggagc
     2461 atcaaagtaa tgaaagtgaa aacataattg atgttgcacc accacaaagt ggagagccta
     2521 atgatcaaag tggagttcaa acatcatcaa ttaatgatca tatgggaact acaacagatg
     2581 agcatgtgaa tattaatatg cgtggtgaga atctacgaat gagcacacgg acaaaaacaa
     2641 aaccaaaaca tctttctgaa tacatcacaa aattgccacc atcactcgag catgatcatc
     2701 ccattcccaa ctcagattct tccacgtcca acactgccat ggtatatcct ctttctcact
     2761 atgttgctta tgataaattt tcaaaatctc atcgttcttt cttagcggcc atcacatccc
     2821 atgatgagcc aaaactttta agcaggctgc gcataaatct gaatggagag aagctatgct
     2881 caaagaaata aaggccctag aagaaaataa aatgtgggtc attaccgagt taccgtaggg
     2941 gaagaaacct attgattcaa aatgggttta taaaatcaaa tacaaaccaa atggagaaat
     3001 tgagagatac aaggctcgtt tggttgcgaa agaatacact caaattgagg gatagatttt
     3061 catgagacgt tcgcgtcggt agcaaaatta gttactgtac gatgcgcgtt ggaagtagtg
     3121 acaaagagag attggcatat acatcaaatg gatgtaaata atgctttctt acaaggagat
     3181 cttgatgaag aaatctacat gaagttacct ccaggatatg taaaattaaa tgagaataga
     3241 gtttgtaaat tgcaaaaatc tatatatggt ctacgacaag cttaaagaaa ttggtatcac
     3301 aagttaacca aggtgttgat tgctatcggt tttaatcagt ccaaggcgga tcactcaatg
     3361 tttgttttac gacaaggaga aactcgtctc atcgcattga tttatgttga tgatatactc
     3421 cttatgggaa aagaccttaa aagaattaaa gaaatcaaag ttcatcttca taataatttt
     3481 tctataaaag acttggggtc attgaattat tttcttggaa tcgaagtttc tcagtcaaaa
     3541 gaaggaattg tcataagtca acgtaagtat accttagaca tt
//
LOCUS       XM_071831776            3557 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841562), transcript variant X5, mRNA.
ACCESSION   XM_071831776
VERSION     XM_071831776.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3557
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3557
                     /gene="LOC139841562"
                     /note="uncharacterized LOC139841562; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841562"
     CDS             2237..2866
                     /gene="LOC139841562"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_071687877.1"
                     /db_xref="GeneID:139841562"
                     /translation="MGQKGYKLFDIKSEKKCVSMNVTFVEDKFPFDVKYEGHKTLEKE
                     HLYEFLPQIQSMCDDHIVNSEEHQSNESENIIDVAPPQSGEPNDQSGVQTSSINDHMG
                     TTTDEHVNINMRGENLRMSTRTKTKPKHLSEYITKLPPSLEHDHPIPNSDSSTSNTAM
                     VYPLSHYVAYDKFSKSHRSFLAAITSHDEPKLLSRLRINLNGEKLCSKK"
ORIGIN      
        1 gatcccataa ccaaaattaa acccaaattt tctaccggtt atacgtaccg atcccgaaat
       61 ttgtccaacc taattcaata caccaatccc taaaatcacg aattcaaatc ggttatacat
      121 actgatcata aaactcacaa attttcatca tcattcaaac ttgcaatcaa atcatcaaaa
      181 cccaacaatt caaaccctaa attgcgaata tgacagggag tgcattggaa agtagcaata
      241 ccaccataga catctcttct ccttatttct tgacatcgtc cgaccatcca tgacaaaatt
      301 ttgtaggcga gaaccttctt aaagatagca attacagtga ttggaaaaac gagatgacga
      361 atgcattgtt agcgaagaac aaaattggtt tcatcgatgg aacaattcct atgccaccag
      421 aaggatccaa agacttaatg aactggagaa ggtgtaatgc aatggttaaa gggtggcttg
      481 taaattcaat ggataaagaa attaagatga gtgtgaaata cgctgttaca gcacgtgata
      541 tctggacaga tttacaagaa cgttttgata aagagaatgc accacgtgca taagagctac
      601 aaaggtccat caccatgatc taccaaaaca atcaaacgat atcctcttat tacacaaaat
      661 taagatcggt gtgggatgaa atcgcatcag ttagcccaat cccaacctgc acttgcaaca
      721 cctgtacatg tgaattatca aaagccatag gaaagatgcg tgataaagag aggctttatg
      781 atttccttat gggattaaac aatgaataca atggaatccg atcacaaatc cttaatagtg
      841 atccactacc ctccgttgta gctgcttttc acttagtaaa tcaagatgag cagcaacgtc
      901 aagttggagc tatacgaagc accactgtgg acgcatcagc cttccagaca catacaaaga
      961 gcgctcaaaa gagcacaaga aaattcaata caaacactta caggaaggag gatcgtgaaa
     1021 cagaagaaaa gtcttgcact tactgtcaaa agaatggaca tacagtggat ggttgctttg
     1081 aaattgtcgg gtatcctgaa tagtggacga agaaatcttc aagttttaag tcgagtaaac
     1141 caagaagttt caaagctgca atagttccag aggaaaagca gaactcaatt ttaaccagag
     1201 aggactatga aaagctgatg cagttgttga gaatatcaca aacgaaggaa tcttcaactt
     1261 cagccaacat gacaggagaa attcttaccc gtgactatac cagatggaag ttccgtacct
     1321 gtaaaaggag ttggtaatat ctaattacac ggagggtgta atttgaaaca tgacttacgt
     1381 tcgaggaacc tgattgagat gagtgagcaa cgtgatggat tgtactactt gaagccattc
     1441 aaatggatga ctttggctat ggctgctttt aaacaacaag aaatttggca tcgacttttg
     1501 ggacatgctt cggatagtgt tcttaagaaa ctgaaacatc taggtagttt tgacttacat
     1561 aaccactttt gcgattcatg tattcgagct aaacaaattc gcttaccttt tccacttagc
     1621 ttctctaaaa ccattgcttg tttcgattta atacatatag atatttgggt aaatatcaac
     1681 atgcttcgtt aaatgtgctc attattttct atctattgtt gatgatcata gtaggggtgt
     1741 ttgggtttat ttaatgcgtg caaaatctga ggttggacat ttaatcacca cgttttataa
     1801 catggtaaaa gctcaattta acaaatgcat aaaaagaata aggcggacaa tggaacagag
     1861 tttcaatcta actacatgtt ggatttttat aaagaaaatg ggttattttt aaaacatcgt
     1921 gtccctacac accgcaacaa aatggtgtgg tggaacgaaa acatagacac ttgttggaga
     1981 tgagtcgggc ccttaggttt gaagcttcat taccaataga gttttggggg attgtgttct
     2041 cacggcggct tacattataa agaagcttcc tagtcgagcg ttagatcaca agacacccca
     2101 cgagatactt cttaggaaat taccaaccta cgatcacttg aaggtctttg gatgtttggc
     2161 gtatgtacat gatacttttt ataaacaaaa caagttcggt gaaaagggga gaccttgcgt
     2221 tttcttgagt tatccaatgg ggcaaaaggg atacaagtta tttgatataa aaagtgagaa
     2281 gaagtgtgtt agtatgaatg tcacttttgt tgaggataag tttcctttcg atgtcaagta
     2341 tgaaggtcat aaaaccttag agaaggaaca cttgtatgag tttttacctc aaatacaaag
     2401 catgtgtgat gatcatattg tgaacagtga ggagcatcaa agtaatgaaa gtgaaaacat
     2461 aattgatgtt gcaccaccac aaagtggaga gcctaatgat caaagtggag ttcaaacatc
     2521 atcaattaat gatcatatgg gaactacaac agatgagcat gtgaatatta atatgcgtgg
     2581 tgagaatcta cgaatgagca cacggacaaa aacaaaacca aaacatcttt ctgaatacat
     2641 cacaaaattg ccaccatcac tcgagcatga tcatcccatt cccaactcag attcttccac
     2701 gtccaacact gccatggtat atcctctttc tcactatgtt gcttatgata aattttcaaa
     2761 atctcatcgt tctttcttag cggccatcac atcccatgat gagccaaaac ttttaagcag
     2821 gctgcgcata aatctgaatg gagagaagct atgctcaaag aaataaaggc cctagaagaa
     2881 aataaaatgt gggtcattac cgagttaccg taggggaaga aacctattga ttcaaaatgg
     2941 gtttataaaa tcaaatacaa accaaatgga gaaattgaga gatacaaggc tcgtttggtt
     3001 gcgaaagaat acactcaaat tgagggatag attttcatga gacgttcgcg tcggtagcaa
     3061 aattagttac tgtacgatgc gcgttggaag tagtgacaaa gagagattgg catatacatc
     3121 aaatggatgt aaataatgct ttcttacaag gagatcttga tgaagaaatc tacatgaagt
     3181 tacctccagg atatgtaaaa ttaaatgaga atagagtttg taaattgcaa aaatctatat
     3241 atggtctacg acaagcttaa agaaattggt atcacaagtt aaccaaggtg ttgattgcta
     3301 tcggttttaa tcagtccaag gcggatcact caatgtttgt tttacgacaa ggagaaactc
     3361 gtctcatcgc attgatttat gttgatgata tactccttat gggaaaagac cttaaaagaa
     3421 ttaaagaaat caaagttcat cttcataata atttttctat aaaagacttg gggtcattga
     3481 attattttct tggaatcgaa gtttctcagt caaaagaagg aattgtcata agtcaacgta
     3541 agtatacctt agacatt
//
LOCUS       XM_071831777            3397 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841562), transcript variant X6, mRNA.
ACCESSION   XM_071831777
VERSION     XM_071831777.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3397
                     /gene="LOC139841562"
                     /note="uncharacterized LOC139841562; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841562"
     CDS             2141..2656
                     /gene="LOC139841562"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_071687878.1"
                     /db_xref="GeneID:139841562"
                     /translation="MGQKGYKLFDIKSEKKCVSMNVTFVEDKFPFDVKYEGHKTLEKE
                     HLYEFLPQIQSMCDDHIVNSEEHQSNESENIIDVAPPQSGEPNDQSGVQTSSINDHMG
                     TTTDEHVNINMRGENLRMSTRTKTKPKHLSEYITKLPPSLEHDHPIPNSDSSTSNTAM
                     RPSHPMMSQNF"
ORIGIN      
        1 gatcccataa ccaaaattaa acccaaattt tctaccggtt atacgtaccg atcccgaaat
       61 ttgtccaacc taattcaata caccaatccc taaaatcacg aattcaaatc ggttatacat
      121 actgatcata aaactcacaa attttcatca tcattcaaac ttgcaatcaa atcatcaaaa
      181 cccaacaatt caaaccctaa attgcgaata tgacagggag tgcattggaa agtagcaata
      241 ccaccataga catctcttct ccttatttct tgacatcgtc cgaccatcca tgacaaaatt
      301 ttgtaggcga gaaccttctt aaagatagca attacagtga ttggaaaaac gagatgacga
      361 atgcattgtt agcgaagaac aaaattggtt tcatcgatgg aacaattcct atgccaccag
      421 aaggatccaa agacttaatg aactggagaa ggtgtaatgc aatggttaaa gggtggcttg
      481 taaattcaat ggataaagaa attaagatga gtgtgaaata cgctgttaca gcacgtgata
      541 tctggacaga tttacaagaa cgttttgata aagagaatgc accacgtgca taagagctac
      601 aaaggtccat caccatgatc taccaaaaca atcaaacgat atcctcttat tacacaaaat
      661 taagatcggt gtgggatgaa atcgcatcag ttagcccaat cccaacctgc acttgcaaca
      721 cctgtacatg tgaattatca aaagccatag gaaagatgcg tgataaagag aggctttatg
      781 atttccttat gggattaaac aatgaataca atggaatccg atcacaaatc cttaatagtg
      841 atccactacc ctccgttgta gctgcttttc acttagtaaa tcaagatgag cagcaacgtc
      901 aagttggagc tatacgaagc accactgtgg acgcatcagc cttccagaca catacaaaga
      961 gcgctcaaaa gagcacaaga aaattcaata caaacactta caggaaggag gatcgtgaaa
     1021 cagaagaaaa gtcttgcact tactgtcaaa agaatggaca tacagtggat ggttgctttg
     1081 aaattgtcgg gtatcctgaa tagtggacga agaaatcttc aagttttaag tcgagtaaac
     1141 caagaagttt caaagctgca atagttccag aggaaaagca gaactcaatt ttaaccagag
     1201 aggactatga aaagctgatg cagttgttga gaatatcaca aacgaaggaa tcttcaactt
     1261 cagccaacat gacaggactt acgttcgagg aacctgattg agatgagtga gcaacgtgat
     1321 ggattgtact acttgaagcc attcaaatgg atgactttgg ctatggctgc ttttaaacaa
     1381 caagaaattt ggcatcgact tttgggacat gcttcggata gtgttcttaa gaaactgaaa
     1441 catctaggta gttttgactt acataaccac ttttgcgatt catgtattcg agctaaacaa
     1501 attcgcttac cttttccact tagcttctct aaaaccattg cttgtttcga tttaatacat
     1561 atagatattt gggtaaatat caacatgctt cgttaaatgt gctcattatt ttctatctat
     1621 tgttgatgat catagtaggg gtgtttgggt ttatttaatg cgtgcaaaat ctgaggttgg
     1681 acatttaatc accacgtttt ataacatggt aaaagctcaa tttaacaaat gcataaaaag
     1741 aataaggcgg acaatggaac agagtttcaa tctaactaca tgttggattt ttataaagaa
     1801 aatgggttat ttttaaaaca tcgtgtccct acacaccgca acaaaatggt gtggtggaac
     1861 gaaaacatag acacttgttg gagatgagtc gggcccttag gtttgaagct tcattaccaa
     1921 tagagttttg ggggattgtg ttctcacggc ggcttacatt ataaagaagc ttcctagtcg
     1981 agcgttagat cacaagacac cccacgagat acttcttagg aaattaccaa cctacgatca
     2041 cttgaaggtc tttggatgtt tggcgtatgt acatgatact ttttataaac aaaacaagtt
     2101 cggtgaaaag gggagacctt gcgttttctt gagttatcca atggggcaaa agggatacaa
     2161 gttatttgat ataaaaagtg agaagaagtg tgttagtatg aatgtcactt ttgttgagga
     2221 taagtttcct ttcgatgtca agtatgaagg tcataaaacc ttagagaagg aacacttgta
     2281 tgagttttta cctcaaatac aaagcatgtg tgatgatcat attgtgaaca gtgaggagca
     2341 tcaaagtaat gaaagtgaaa acataattga tgttgcacca ccacaaagtg gagagcctaa
     2401 tgatcaaagt ggagttcaaa catcatcaat taatgatcat atgggaacta caacagatga
     2461 gcatgtgaat attaatatgc gtggtgagaa tctacgaatg agcacacgga caaaaacaaa
     2521 accaaaacat ctttctgaat acatcacaaa attgccacca tcactcgagc atgatcatcc
     2581 cattcccaac tcagattctt ccacgtccaa cactgccatg cggccatcac atcccatgat
     2641 gagccaaaac ttttaagcag gctgcgcata aatctgaatg gagagaagct atgctcaaag
     2701 aaataaaggc cctagaagaa aataaaatgt gggtcattac cgagttaccg taggggaaga
     2761 aacctattga ttcaaaatgg gtttataaaa tcaaatacaa accaaatgga gaaattgaga
     2821 gatacaaggc tcgtttggtt gcgaaagaat acactcaaat tgagggatag attttcatga
     2881 gacgttcgcg tcggtagcaa aattagttac tgtacgatgc gcgttggaag tagtgacaaa
     2941 gagagattgg catatacatc aaatggatgt aaataatgct ttcttacaag gagatcttga
     3001 tgaagaaatc tacatgaagt tacctccagg atatgtaaaa ttaaatgaga atagagtttg
     3061 taaattgcaa aaatctatat atggtctacg acaagcttaa agaaattggt atcacaagtt
     3121 aaccaaggtg ttgattgcta tcggttttaa tcagtccaag gcggatcact caatgtttgt
     3181 tttacgacaa ggagaaactc gtctcatcgc attgatttat gttgatgata tactccttat
     3241 gggaaaagac cttaaaagaa ttaaagaaat caaagttcat cttcataata atttttctat
     3301 aaaagacttg gggtcattga attattttct tggaatcgaa gtttctcagt caaaagaagg
     3361 aattgtcata agtcaacgta agtatacctt agacatt
//
LOCUS       XR_011757408            2577 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841562), transcript variant X7, misc_RNA.
ACCESSION   XR_011757408
VERSION     XR_011757408.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2577
                     /gene="LOC139841562"
                     /note="uncharacterized LOC139841562; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841562"
     misc_RNA        1..2577
                     /gene="LOC139841562"
                     /product="uncharacterized protein, transcript variant X7"
                     /db_xref="GeneID:139841562"
ORIGIN      
        1 gatcccataa ccaaaattaa acccaaattt tctaccggtt atacgtaccg atcccgaaat
       61 ttgtccaacc taattcaata caccaatccc taaaatcacg aattcaaatc ggttatacat
      121 actgatcata aaactcacaa attttcatca tcattcaaac ttgcaatcaa atcatcaaaa
      181 cccaacaatt caaaccctaa attgcgaata tgacagggag tgcattggaa agtagcaata
      241 ccaccataga catctcttct ccttatttct tgacatcgtc cgaccatcca tgacaaaatt
      301 ttgtaggcga gaaccttctt aaagatagca attacagtga ttggaaaaac gagatgacga
      361 atgcattgtt agcgaagaac aaaattggtt tcatcgatgg aacaattcct atgccaccag
      421 aaggatccaa agacttaatg aactggagaa ggtgtaatgc aatggttaaa gggtggcttg
      481 taaattcaat ggataaagaa attaagatga gtgtgaaata cgctgttaca gcacgtgata
      541 tctggacaga tttacaagaa cgttttgata aagagaatgc accacgtgca taagagctac
      601 aaaggtccat caccatgatc taccaaaaca atcaaacgat atcctcttat tacacaaaat
      661 taagatcggt gtgggatgaa atcgcatcag ttagcccaat cccaacctgc acttgcaaca
      721 cctgtacatg tgaattatca aaagccatag gaaagatgcg tgataaagag aggctttatg
      781 atttccttat gggattaaac aatgaataca atggaatccg atcacaaatc cttaatagtg
      841 atccactacc ctccgttgta gctgcttttc acttagtaaa tcaagatgag cagcaacgtc
      901 aagttggagc tatacgaagc accactgtgg acgcatcagc cttccagaca catacaaaga
      961 gcgctcaaaa gagcacaaga aaattcaata caaacactta caggaaggag gatcgtgaaa
     1021 cagaagaaaa gtcttgcact tactgtcaaa agaatggaca tacagtggat ggttgctttg
     1081 aaattgtcgg gtatcctgaa tagtggacga agaaatcttc aagttttaag tcgagtaaac
     1141 caagaagttt caaagctgca atagttccag aggaaaagca gaactcaatt ttaaccagag
     1201 aggactatga aaagctgatg cagttgttga gaatatcaca aacgaaggaa tcttcaactt
     1261 cagccaacat gacaggactt acgttcgagg aacctgattg agatgagtga gcaacgtgat
     1321 ggattgtact acttgaagcc attcaaatgg atgactttgg ctatggctgc ttttaaacaa
     1381 caagaaattt ggcatcgact tttgggacat gcttcggata gtgttcttaa gaaactgaaa
     1441 catctagtga ggagcatcaa agtaatgaaa gtgaaaacat aattgatgtt gcaccaccac
     1501 aaagtggaga gcctaatgat caaagtggag ttcaaacatc atcaattaat gatcatatgg
     1561 gaactacaac agatgagcat gtgaatatta atatgcgtgg tgagaatcta cgaatgagca
     1621 cacggacaaa aacaaaacca aaacatcttt ctgaatacat cacaaaattg ccaccatcac
     1681 tcgagcatga tcatcccatt cccaactcag attcttccac gtccaacact gccatggtat
     1741 atcctctttc tcactatgtt gcttatgata aattttcaaa atctcatcgt tctttcttag
     1801 cggccatcac atcccatgat gagccaaaac ttttaagcag gctgcgcata aatctgaatg
     1861 gagagaagct atgctcaaag aaataaaggc cctagaagaa aataaaatgt gggtcattac
     1921 cgagttaccg taggggaaga aacctattga ttcaaaatgg gtttataaaa tcaaatacaa
     1981 accaaatgga gaaattgaga gatacaaggc tcgtttggtt gcgaaagaat acactcaaat
     2041 tgagggatag attttcatga gacgttcgcg tcggtagcaa aattagttac tgtacgatgc
     2101 gcgttggaag tagtgacaaa gagagattgg catatacatc aaatggatgt aaataatgct
     2161 ttcttacaag gagatcttga tgaagaaatc tacatgaagt tacctccagg atatgtaaaa
     2221 ttaaatgaga atagagtttg taaattgcaa aaatctatat atggtctacg acaagcttaa
     2281 agaaattggt atcacaagtt aaccaaggtg ttgattgcta tcggttttaa tcagtccaag
     2341 gcggatcact caatgtttgt tttacgacaa ggagaaactc gtctcatcgc attgatttat
     2401 gttgatgata tactccttat gggaaaagac cttaaaagaa ttaaagaaat caaagttcat
     2461 cttcataata atttttctat aaaagacttg gggtcattga attattttct tggaatcgaa
     2521 gtttctcagt caaaagaagg aattgtcata agtcaacgta agtatacctt agacatt
//
LOCUS       XM_071831778             582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841564), mRNA.
ACCESSION   XM_071831778
VERSION     XM_071831778.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..582
                     /gene="LOC139841564"
                     /note="uncharacterized LOC139841564; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841564"
     CDS             1..582
                     /gene="LOC139841564"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687879.1"
                     /db_xref="GeneID:139841564"
                     /translation="MVSQDEADQMWTFLASTIREAAKEALGVAVGTSRGHRSDRESWW
                     LSDEVQSKVALKQLRFRDLITCRDETTADSKEGANDIYRIAKARERRRRDLDNIKFIK
                     NEAGQTLVKEDEIQKIWEGYFSSLFAGGRPESHEDQQASDIEQSRNNLDCGMINQEEV
                     RSALRKMGRNKAAGPDQIPVEAWRCLGDDGVRW"
ORIGIN      
        1 atggtatctc aagacgaggc ggatcagatg tggacttttc tggcgtccac cattagagag
       61 gcagccaagg aagccttagg tgtggcagta ggaacatcga gaggacatag gtcggataga
      121 gaatcatggt ggcttagcga cgaggttcaa agcaaagtcg cgcttaagca actaaggttt
      181 agggatctca tcacttgtcg ggatgagact acggcagact ccaaagaagg agcaaatgat
      241 atctacagga tagccaaagc tagggagcga aggcgcaggg acctagataa catcaagttt
      301 atcaaaaatg aagctggtca aaccctagtt aaggaagatg aaattcaaaa aatatgggaa
      361 gggtatttct catccctttt cgctggagga agacccgaaa gtcatgaaga tcagcaagct
      421 tctgatatag aacaatcacg gaacaactta gattgtggga tgatcaacca agaggaagta
      481 agatcggcac taagaaagat ggggagaaat aaagccgcgg gaccggacca gatccccgtt
      541 gaggcgtggc ggtgcctcgg cgatgatggt gttaggtggt ag
//
LOCUS       XM_071831779            1146 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841565), mRNA.
ACCESSION   XM_071831779
VERSION     XM_071831779.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1146
                     /gene="LOC139841565"
                     /note="uncharacterized LOC139841565; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841565"
     CDS             1..1146
                     /gene="LOC139841565"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687880.1"
                     /db_xref="GeneID:139841565"
                     /translation="MPMEWRVSEIIPIYKNKGDAQTCTNYRGIKLLSHTMKLWERVID
                     SRLRRVTNVSENKFGFMPGRSSIEAIHIIRNLREKYREKQKNLEMVFIDLEKAYDCVP
                     RNLIWKTLRDRSILSRYISAIKDMYEGAKSCVRTPVGNIEVFPIEVGLHQDDIVLVSE
                     SKEELNRRLEQWRMALEGNGLQISRQKTEYLRCDFDRNNDEQDDGVNICIGEQVLHPK
                     TFFRYLGSMLHKSGRIDEDVSHRIKVGWMKWRAIYTDLGYGGENRDKKLTSEYFALIG
                     GNLVTWRSKKQKVVALSSAEAEFRGIAKGVTEAIWIKKLLTEIEFPPIDAIKIMCNNE
                     AAIAISKNPIQHDRTKHVFEDEGNEESDKGIGIIPKMPSHVWHVTDI"
     misc_feature    22..684
                     /gene="LOC139841565"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(277..294,451..453,457..462,670..675)
                     /gene="LOC139841565"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(277..294,457..459)
                     /gene="LOC139841565"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    757..>1056
                     /gene="LOC139841565"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(763..774,877..885,892..894,994..996)
                     /gene="LOC139841565"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcctatgg aatggagagt gagcgagatt attcccatct ataagaacaa aggggatgct
       61 caaacttgca ctaactatag aggtataaaa ttacttagtc atactatgaa actctgggag
      121 agagtgatcg actctagact tagacgcgtg accaatgttt cggaaaataa atttggtttc
      181 atgccagggc gctcttcgat agaggctatc catattatta ggaaccttag ggaaaagtat
      241 agagaaaagc aaaagaacct tgagatggtt ttcatagacc tggaaaaggc ctacgattgc
      301 gtcccacgaa atttgatttg gaagaccctt agagatagaa gtattctgag tagatacatt
      361 agtgctatta aggatatgta tgaaggggcg aagtcttgcg tccgaacgcc ggtgggaaat
      421 atcgaagttt tcccaataga agttggcctg catcaggatg atattgtgct tgtttctgaa
      481 tctaaggagg aacttaatag aagactagag caatggagga tggccttaga aggtaatggt
      541 ctacaaatta gtagacaaaa gacggaatat cttagatgtg atttcgatag aaacaatgat
      601 gaacaagatg atggagtgaa catctgcatt ggagaacagg tcttgcatcc aaaaaccttt
      661 tttaggtacc taggctcgat gctccacaaa tcggggagga ttgatgaaga cgtgtctcac
      721 cgtattaaag tagggtggat gaagtggaga gcgatataca ctgatttagg gtacggggga
      781 gaaaacagag ataagaaatt aacatccgag tactttgctc tcatcggagg taatttggtc
      841 acatggagaa gcaagaaaca aaaggttgta gccttatcaa gtgccgaagc tgaatttaga
      901 gggattgcga aaggtgttac tgaagctata tggattaaga aactcttgac agagattgag
      961 tttcctccta ttgacgctat caagatcatg tgtaataatg aagcagcaat agctatatca
     1021 aaaaatccaa ttcaacacga tcgaaccaaa catgtttttg aagatgaagg gaatgaagaa
     1081 agtgacaaag gaattggtat aatacctaaa atgccctctc atgtttggca tgtgactgac
     1141 atttaa
//
LOCUS       XM_071831781             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841566), mRNA.
ACCESSION   XM_071831781
VERSION     XM_071831781.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139841566"
                     /note="uncharacterized LOC139841566; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841566"
     CDS             1..813
                     /gene="LOC139841566"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687882.1"
                     /db_xref="GeneID:139841566"
                     /translation="MIPITEAWSFSKWAIDIDGPITACSGGIKFLVVAIDYFTKWVEA
                     KALATVTDRRIHNFFWEDIVCRFGIPNEIVSNNGTQGIKARLRLYGNEWVDELPSVLW
                     AHRTTHKNNTGETPFSLVYGTEAVIPAELMVPTKHIRNFDESSNDEGLRANLDMLEER
                     REIATIREAIKKQKISKYYDKHVKPMSFRVGDYVWRNNEASRAENTGNLGPNWEGPYE
                     VFGISATGSYILAGLNKQQDHEQHLQEFGLKCSPAPCRTQVASHKHLLQVDL"
ORIGIN      
        1 atgataccaa taacggaagc gtggtcattc agcaagtggg ccatcgacat tgacggtccc
       61 attactgcgt gctcaggagg aataaaattc ttggtagtag caattgatta tttcaccaaa
      121 tgggtggagg caaaagcatt ggcaacagtt accgacaggc gcatccataa cttcttttgg
      181 gaagatattg tgtgtaggtt tggtatcccc aatgaaattg tcagcaacaa tggtactcaa
      241 gggataaagg cacgcctgcg tttgtatggt aatgagtggg tcgatgagct cccaagtgtt
      301 ttatgggcgc atcgtaccac tcataaaaac aacacaggag aaacaccatt cagtttggtc
      361 tacggaactg aagcagtaat ccccgcagaa ttaatggttc caaccaagca catacgcaac
      421 tttgacgagt caagcaacga tgagggcttg cgcgctaatc tggatatgct agaagagcgc
      481 cgagaaatag ccaccatacg ggaagcaatt aaaaagcaga agatctctaa atactacgac
      541 aagcacgtta agccaatgtc attcagggtt ggagattatg tgtggcgtaa taatgaagca
      601 agtcgggctg agaatactgg aaaccttgga ccaaactggg aaggtcctta tgaagttttt
      661 ggaataagtg caacggggtc ctatatcctg gcaggattga ataaacaaca agatcatgag
      721 cagcatctgc aagagtttgg attaaaatgt tctccagcac cttgccggac tcaagtagct
      781 tctcataagc atcttcttca agttgatctt tga
//
LOCUS       XM_071831782            2224 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841567), mRNA.
ACCESSION   XM_071831782
VERSION     XM_071831782.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2224
                     /gene="LOC139841567"
                     /note="uncharacterized LOC139841567; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841567"
     CDS             1..2157
                     /gene="LOC139841567"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687883.1"
                     /db_xref="GeneID:139841567"
                     /translation="MPNRALHYIIKLSSIIRQVISSISGIIMQSPDTVCDEIMDSKKE
                     DSTQGRLKEDIEKHPKITQWFPVLKRKTPETLSARRHSIPEIRECPSSDNNNNNKKLK
                     FESYVFNTLFEKARENEEIITARHPEKKSRDVGDLTGCVVEGAEGTRWCLKFDSVSAS
                     KRCEKLYDKALGELIYETNGKTLLERAVDEYCPFHVELWIALAWLENYPDGAKSVLKK
                     AHEKLPTHVQPALWTAEAKLEEAYNGNTDMVSKMIRMGINDLLHQHVVFDRKAWIKEA
                     EAAERSGFVKTCNAVIDRTVKYGVKYQDQELTMLGDAQECKKRGSFETARAIYRVLTN
                     TFGYDENLWIKAAQLEKDDGKLDLFDALLCKAVKRKPKSEVLWLMRANEKRFAGDLEA
                     ARKILEEAYAELPDSEEIWHAAFKLEYDNKELERARTFLAKLSANGGGTERMWMKSAI
                     VERELHNVEGERRLINEGLKLFPWFFKLWLMLGQLEERLDRLGEAKDAYESGVRHCPN
                     STPLWLSLANIEERTSEYSRVKDVLKKARKRNPKNPELWVASVRAELRHGSIFQAQEL
                     YSMATDECGDNIGILWVASIELAPIQQRYHVSHDIALKKCGDDPHIMAVIGKICWENK
                     NVDEARSWLNRAVTVAPDVGDFWGLLYRFELQHGTEDQQKEVLRKCIDAGPKHGDKWQ
                     PISKALENSHEPVEAILVKLVHALGQQEKLPLQQHL"
     misc_feature    1024..1104
                     /gene="LOC139841567"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(1030..1035,1042..1047,1051..1053,1123..1125,
                     1132..1137,1144..1149,1153..1158,1225..1227,1234..1239,
                     1246..1251,1258..1260)
                     /gene="LOC139841567"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    <1093..1710
                     /gene="LOC139841567"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; Region: LapB; COG2956"
                     /db_xref="CDD:442196"
     misc_feature    1117..1209
                     /gene="LOC139841567"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1222..1299
                     /gene="LOC139841567"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1411..2094
                     /gene="LOC139841567"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; Region: LapB; COG2956"
                     /db_xref="CDD:442196"
     misc_feature    order(1429..1431,1438..1443,1450..1455,1459..1461,
                     1531..1533,1540..1545,1552..1557,1561..1566,1633..1635,
                     1642..1647,1654..1659,1666..1668)
                     /gene="LOC139841567"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1429..1512
                     /gene="LOC139841567"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1525..1617
                     /gene="LOC139841567"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1630..1710
                     /gene="LOC139841567"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
ORIGIN      
        1 atgccaaatc gcgcacttca ttatatcata aaactgtctt cgattattcg tcaagttatc
       61 tcttctatct caggaatcat catgcaatct ccagatactg tgtgcgatga gatcatggat
      121 tcaaaaaagg aagatagtac acaaggtagg ttgaaagagg atattgaaaa gcatccgaaa
      181 attactcaat ggtttcctgt tcttaagaga aagacacctg agacactgtc tgctagacgg
      241 catagtattc ccgaaattag ggaatgtcct tcaagtgata ataataataa taataaaaag
      301 ttgaaatttg aaagttatgt attcaatact ttatttgaga aagctaggga aaatgaagag
      361 attattactg caaggcatcc ggagaagaag agtagagatg taggtgattt gactggttgt
      421 gttgttgagg gtgctgaagg aacacgttgg tgtttgaagt ttgattctgt ttcagcttcc
      481 aagcgttgtg aaaagctata tgataaagcg ttgggtgaac ttatttatga aacaaatggc
      541 aagacattgc ttgaaagagc cgttgatgag tattgcccat tccatgttga attgtggatc
      601 gcgctggctt ggttagaaaa ctaccccgat ggtgcaaaat cggtgctgaa aaaggcacat
      661 gaaaagcttc cgacacacgt acaaccggca ctttggactg cagaagccaa acttgaagaa
      721 gcttataatg ggaacacaga tatggttagc aaaatgataa gaatgggtat taatgattta
      781 ttgcatcaac atgtggtatt tgatcgaaaa gcttggataa aagaagctga agctgctgaa
      841 cgatcggggt ttgtgaaaac atgtaacgcg gtaattgata gaactgtcaa gtacggtgtt
      901 aaatatcaag accaagaact gaccatgctt ggtgatgcac aagaatgcaa gaaaaggggt
      961 tcatttgaaa ctgctagagc aatttatagg gttttgacta atacgtttgg ttacgatgaa
     1021 aatttatgga ttaaagcagc acaacttgag aaagatgatg ggaaactaga tttgtttgat
     1081 gctttgcttt gtaaagctgt caagcgcaaa ccaaaatctg aggttttatg gttgatgaga
     1141 gctaacgaaa agcggtttgc aggtgatctc gaagcagcca ggaagattct agaagaagcg
     1201 tatgctgaac ttccagattc tgaagaaatt tggcatgccg catttaaact tgaatatgat
     1261 aacaaggagc ttgagcgggc ccggacgttt cttgcaaaac tctctgcaaa tggaggagga
     1321 acagagagaa tgtggatgaa gtctgcaatc gttgaacgag aacttcataa tgttgaagga
     1381 gaaagacggt tgattaatga aggtttgaaa ttgtttcctt ggttttttaa gttgtggttg
     1441 atgctcggtc agcttgagga acggttagat cgtttaggtg aagcgaaaga tgcgtacgaa
     1501 tcgggtgtaa ggcattgtcc aaattcaaca cctctttggc tttcacttgc gaatatcgaa
     1561 gaaagaacga gcgagtatag tagagttaaa gatgtgttaa aaaaggcacg aaaaaggaac
     1621 ccaaagaatc ccgaactatg ggtggctagt gttcgtgcag agttaagaca cggatctata
     1681 tttcaagctc aggagttgta ttcaatggct actgatgagt gcggtgataa tattggtata
     1741 ctatgggttg cttcgattga gcttgctcca atacaacaaa ggtatcacgt gagtcatgat
     1801 attgctttaa agaagtgtgg agatgacccg catataatgg ctgttattgg taagatttgt
     1861 tgggagaata agaatgtgga tgaagcacga agttggctta atcgggcagt tacggttgca
     1921 ccagatgttg gtgacttttg gggtttgctt tatagatttg aattacaaca tggaactgag
     1981 gatcagcaga aggaagtttt gaggaaatgt attgatgcag ggccgaaaca cggcgacaag
     2041 tggcagccca tatcaaaggc actagagaat tcgcacgaac cggttgaagc cattttggtg
     2101 aaactggttc atgcacttgg gcaacaagag aaactacctc tacaacaaca tctctaactg
     2161 gttttattag tgtttgttat ctcgacttaa tttgttccag tttgtttttt ctttatttaa
     2221 tttg
//
LOCUS       XM_071831783            1662 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 10-epi-juneol synthase-like
            (LOC139841568), mRNA.
ACCESSION   XM_071831783
VERSION     XM_071831783.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1662
                     /gene="LOC139841568"
                     /note="10-epi-juneol synthase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 61
                     Proteins"
                     /db_xref="GeneID:139841568"
     CDS             1..1662
                     /gene="LOC139841568"
                     /codon_start=1
                     /product="10-epi-juneol synthase-like"
                     /protein_id="XP_071687884.1"
                     /db_xref="GeneID:139841568"
                     /translation="MVISAMKANSENFIRPLANFPRSMWGDRFLAFSLDKSELKIYAK
                     ATEEPKEEVKRLINDQTIDPNAKLSLIYSVYRLGLRYLFIEEIDSQLHKLFKDLTMED
                     YEETTLYTMSINFHVFRQHGYKVSCDVFKKFKDYSSGKFKDDIKSDVRGILSLYEAAQ
                     LSIHGESILDEALVFAKAQLTSVVDTLESDLVQQVKHALIIPSYRGVQMIEARLYFAN
                     YREECCKYNSLQKLANAHFNYLQLLQKEELRIVTQWAKDMEFQIITPYARDRVPELYL
                     WTLAIYLEPHYSQGRIMVTKIAQLITVFNDTYDAYATIHELRLLTDAVNRWELSAIDQ
                     LPDNIKPLYKALLDTYADFEEQLSKEGRASRVHTSKRTFQELARGYHQEAEWRHNLQV
                     PSFDDYIENGLITSTYNVFSVSFLMGMGDIVNEEVVAWYESHPKILKALDLLGRLYND
                     VTSFKFERQRAQKQITSVDAYMNTFGVEENEAVDEIKKMLENAWKDINEECLKPTKFS
                     MEILSIFLNLARMTDFVYRYMDTFTFPEKSIAEYITLLFVGPVAM"
     misc_feature    43..1650
                     /gene="LOC139841568"
                     /note="Plant Terpene Cyclases, Class 1; Region:
                     Terpene_cyclase_plant_C1; cd00684"
                     /db_xref="CDD:173832"
     misc_feature    order(43..66,1366..1371,1375..1383,1387..1389,1393..1404,
                     1585..1596)
                     /gene="LOC139841568"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173832"
     misc_feature    order(802..804,829..831,892..894,898..906,913..915,
                     925..927,1138..1140,1336..1341,1345..1350,1357..1359,
                     1369..1371,1576..1578,1588..1590,1594..1596)
                     /gene="LOC139841568"
                     /note="substrate binding pocket [chemical binding]; other
                     site"
                     /db_xref="CDD:173832"
     misc_feature    order(913..915,925..927,1345..1347,1357..1359,1369..1371)
                     /gene="LOC139841568"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173832"
     misc_feature    913..927
                     /gene="LOC139841568"
                     /note="aspartate-rich region 1; other site"
                     /db_xref="CDD:173832"
     misc_feature    1345..1371
                     /gene="LOC139841568"
                     /note="aspartate-rich region 2; other site"
                     /db_xref="CDD:173832"
ORIGIN      
        1 atggtgattt ctgccatgaa agcaaacagc gaaaacttca ttcgcccttt ggccaacttc
       61 cctcgttcta tgtggggaga ccgtttccta gcattttctc ttgataaatc ggaattgaaa
      121 atatatgcta aagctaccga ggaaccaaaa gaagaagtga aacgattaat aaatgatcaa
      181 accattgatc caaatgcgaa acttagtttg atctattcag tgtatcgtct tggtttgaga
      241 tatctcttca tcgaagagat agatagccag cttcacaaac ttttcaagga tcttaccatg
      301 gaagactacg aagaaactac tttgtataca atgtcgatta actttcacgt tttcagacaa
      361 catggttata aagtatcatg tgatgttttt aaaaagttca aggactacag ttctggtaaa
      421 ttcaaggacg atatcaaatc tgatgttagg ggcattttaa gcttatatga agctgcgcaa
      481 ttgagtattc acggggaatc tattttagat gaagcgttgg tgttcgcgaa agctcaactt
      541 actagtgttg tcgacacttt agaaagtgat cttgtgcaac aagtgaaaca tgcattgatc
      601 attccttctt atcgcggggt gcaaatgatt gaggcgaggc tatatttcgc aaactataga
      661 gaagaatgtt gcaagtataa ctcactacaa aagctcgcaa atgcgcactt caattacttg
      721 caactattgc aaaaagaaga acttcgaatt gttacacagt gggcaaagga catggagttt
      781 caaataataa ctccttatgc aagggataga gtacctgaac tttacttgtg gacattggca
      841 atatacttgg agcctcatta ctctcaagga agaatcatgg tcacaaaaat tgcacaacta
      901 attacagttt ttaatgacac atatgatgca tatgctacta tccatgaact tcgacttcta
      961 accgatgctg taaacaggtg ggaactcagt gctatagacc aacttccaga taatattaaa
     1021 ccactttaca aagctctttt ggatacatat gctgattttg aagaacaact atctaaggaa
     1081 ggaagagcaa gtcgggttca cacttcaaaa agaacatttc aagagctagc aagaggatat
     1141 catcaagagg ccgagtggag acacaattta caagtgccat cattcgatga ctatatcgaa
     1201 aatggattaa taacttccac ctacaatgtt ttttcggtat cttttttaat gggaatgggg
     1261 gatattgtta atgaagaggt tgtggcatgg tatgaaagtc atcctaaaat tcttaaagcc
     1321 ttagacttac ttggaagact ttataatgat gttactagtt tcaagtttga gaggcaaaga
     1381 gcacaaaaac aaatcacatc cgtggatgca tatatgaaca cttttggggt ggaagaaaat
     1441 gaagctgtcg atgaaatcaa gaaaatgttg gaaaatgcat ggaaagatat caacgaggaa
     1501 tgtcttaagc caaccaagtt ttcaatggaa atactttcca tatttcttaa tcttgcacgg
     1561 atgacagatt ttgtgtatcg atacatggac acatttacat ttccggaaaa gagtattgca
     1621 gagtacatta ccctcttatt cgttggccct gttgcaatgt aa
//
LOCUS       XM_071831784             894 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841569), mRNA.
ACCESSION   XM_071831784
VERSION     XM_071831784.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..894
                     /gene="LOC139841569"
                     /note="uncharacterized LOC139841569; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841569"
     CDS             1..894
                     /gene="LOC139841569"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687885.1"
                     /db_xref="GeneID:139841569"
                     /translation="MSPNATTPVHHLSLRSVLEKEKLNDTNFLYWYRNLRIVLKVEKK
                     SYILDGPVPEEPPANATKSIRDAWTKHMDDSTEVACLMLATMIPDLQKDLEHHDAFEM
                     LKQLKEIFHQQARQQRFETVRALHACKMTEGTSVSSYVLKMKSYIDQLERLGSSIGPE
                     LAIDLILNSLPKSYDQFVLNYNMNNLEKSISELHLMLKNAEKNIPSKTYEVLMIREGK
                     IKKPQAKGKVKGKPKSQGNYKGKKFVPKDSVKKKEKPTKDATCFHCGEIGHSKRNCPT
                     YLAELKKTKASNASTSGTKKD"
     misc_feature    292..579
                     /gene="LOC139841569"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    778..825
                     /gene="LOC139841569"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
ORIGIN      
        1 atgtcaccca atgcaactac acccgttcac cacctttctc taagatctgt cttagagaag
       61 gaaaaactca atgatacgaa cttcttatac tggtatcgta atttgagaat tgttctcaaa
      121 gtcgaaaaga agtcgtatat acttgatgga cccgttcccg aggaaccccc tgctaatgcc
      181 actaagagca tccgagatgc ttggactaag catatggatg actccacaga ggtagcatgc
      241 ctcatgttag ccaccatgat tccagacttg caaaaggacc tggaacatca tgatgccttt
      301 gagatgctta agcagctaaa ggaaattttc catcaacaag ctaggcaaca acgctttgaa
      361 actgtcagag cgttacacgc atgcaagatg acagagggaa catctgtaag ctcttatgtt
      421 ctaaaaatga agagctacat agatcaactt gagaggcttg gatcttccat tggtcctgag
      481 ttggcaatag acttgatcct caactcacta ccaaagtcat atgaccagtt cgtcttgaac
      541 tacaatatga acaatttgga gaaatctatc tcggagttgc atttaatgct taagaatgcc
      601 gagaagaata ttccatccaa aacctatgaa gtcctcatga ttcgggaagg aaaaatcaag
      661 aagccacaag ccaaaggcaa agttaaaggc aaacctaaga gtcagggcaa ctacaaaggc
      721 aaaaagtttg tcccaaagga ttctgtcaag aagaaagaaa aacctaccaa agatgccact
      781 tgtttccatt gtggagaaat tggtcattcg aagcgaaact gcccgactta ccttgcagag
      841 ctgaagaaga caaaggctag caatgctagc acctcaggga ctaagaaaga ttaa
//
LOCUS       XM_071831785             375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841570), mRNA.
ACCESSION   XM_071831785
VERSION     XM_071831785.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..375
                     /gene="LOC139841570"
                     /note="uncharacterized LOC139841570; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841570"
     CDS             1..375
                     /gene="LOC139841570"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687886.1"
                     /db_xref="GeneID:139841570"
                     /translation="MEKFGSLHQGGSEAFVTDGFNSWKKIERLKEHVGHSDGGNKENR
                     TYTLLYRLLKLALVLPVATAIVERCFSSKKIRKSNLRNRIGEEFLNACVICAIKRETL
                     VEVKDEDVMERFNHMRLRRGKF"
ORIGIN      
        1 atggaaaagt ttgggtcact acaccaaggt ggtagtgagg catttgtgac ggatgggttc
       61 aatagttgga aaaagatcga gagacttaaa gagcatgttg gacatagtga tggtggaaac
      121 aaggaaaata gaacttatac gttgctttac cggttattaa agctagcatt ggtgttaccc
      181 gttgcgaccg caatagttga gcgatgtttt tcgtcaaaga aaattagaaa gtcgaaccta
      241 cgcaatcgta ttggagagga gtttctcaat gcttgtgtaa tttgtgcgat caaaagagaa
      301 actctagtcg aagttaaaga tgaagatgta atggagcgtt ttaatcatat gcgtttacgc
      361 agaggaaaat tctag
//
LOCUS       XM_071831786             471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841572), mRNA.
ACCESSION   XM_071831786
VERSION     XM_071831786.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..471
                     /gene="LOC139841572"
                     /note="uncharacterized LOC139841572; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841572"
     CDS             1..471
                     /gene="LOC139841572"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687887.1"
                     /db_xref="GeneID:139841572"
                     /translation="MGERKFHKRKFIKASASKGKETGPKCKFYKKHGHIHRECPKFRE
                     WLDNKGIPFKKQLQKGERIIKVGNGDELHVEAIGTLLLVLEGGFNLYLNNTLYVPLMT
                     QNLISVSKLDRFGYDFKFGHNCLEVYFDSHVVGTGSLENDLYKLHLENNMRNPY"
ORIGIN      
        1 atgggagaaa ggaagttcca caaaagaaag ttcataaagg caagtgcaag taagggcaag
       61 gaaactggtc caaaatgtaa gttttataag aaacatggac acattcatag agaatgccca
      121 aagtttcgag aatggttaga caacaaaggg attcctttca agaagcagct acaaaagggg
      181 gaaagaatca ttaaggttgg taacggagat gagttacatg ttgaagctat tgggactctc
      241 ttattagttt tagagggcgg ttttaatttg tacttaaata atacactata tgttccatta
      301 atgactcaga accttatttc tgtttctaaa cttgaccgtt ttggttatga ttttaagttt
      361 gggcataatt gtttggaagt gtattttgat tctcatgttg tcggtactgg ttcattagaa
      421 aatgacctct ataagcttca tttagaaaac aacatgcgga atccctattg a
//
LOCUS       XM_071831787            1695 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841573), mRNA.
ACCESSION   XM_071831787
VERSION     XM_071831787.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1695
                     /gene="LOC139841573"
                     /note="uncharacterized LOC139841573; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139841573"
     CDS             1..1695
                     /gene="LOC139841573"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687888.1"
                     /db_xref="GeneID:139841573"
                     /translation="MSTEKPQLAGHSRFRQSTDQISSLITLSHSINVFSTRWKLIINK
                     LNEVLPVLVGIQLEIQDSGENSTLSGLIEEFEETIEFTTKLAQKCIDQSYNGKLLMQS
                     DLDIIFVKLNKQIQCLYEFKSFCCYSIVDSAIVVSKPGPNSSKDDVRFYVNDLVSRFK
                     IGNNEMKKQALICFNEDERFLKIAMEIEGFGHVLIESLSINMEIQEEVLKSIDMICEF
                     DEFIRILVSIGVIGSLIRVLGGGTYSSKCLSTRCLMKCTAECENAWSVSAHGGVTSLL
                     RISASENDSSDELVGLACGVLKNLVGVYEIKRFIVEEGAITIFVNLVKSRNEVSQISA
                     IEFLQAISFGDQKVADSIANEGGIRVLVHVLDPKLSFSSKTRERSIRAIMCLCSDLTG
                     MDRLLSYGFMDHILYFLHNGDISVQEASLKAAFWLSGISDDIKKAMGEVGFLQELVKL
                     VTAKSFEVREMAFSTLSNLVSNPRNRKRFVENDQNVSLLMQSIDQEEGTLCHKKLLLP
                     IIMSLSGCNSGRKKILSSGYLKNIEKLADEEISDARKIVKNLSSNRFVRMVKGIWH"
     misc_feature    796..900
                     /gene="LOC139841573"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    919..1029
                     /gene="LOC139841573"
                     /note="armadillo repeat [structural motif]; Region:
                     armadillo repeat"
                     /db_xref="CDD:293788"
     misc_feature    1291..1413
                     /gene="LOC139841573"
                     /note="Armadillo/beta-catenin-like repeat; Region: Arm;
                     pfam00514"
                     /db_xref="CDD:425727"
ORIGIN      
        1 atgtcaactg aaaaacccca acttgccgga cattcaagat tccggcaatc caccgaccaa
       61 atttcttcat taatcacact ttcacattca atcaatgtct tttcaacaag atggaaatta
      121 ataataaaca agctcaacga agtgctccca gttcttgtcg gtatccaact ggaaattcaa
      181 gattccggtg agaactcaac tctctccggc ttaattgaag aatttgaaga aacaattgaa
      241 tttaccacca aattagctca aaaatgcatc gatcaatcgt acaatgggaa gctgttaatg
      301 cagagtgatc ttgatattat atttgtaaaa ttgaacaaac aaatacaatg cttgtatgaa
      361 tttaaaagct tttgttgtta ttcaattgtg gattctgcaa ttgtggtttc aaaacctggg
      421 cccaattcat caaaagatga cgtcagattt tatgttaatg atttggtatc aaggtttaaa
      481 attgggaata atgagatgaa gaaacaagca ttgatttgtt ttaatgaaga tgaaaggttt
      541 ttgaagattg caatggaaat tgaagggttt ggtcatgttt taattgagtc tttaagtatt
      601 aatatggaaa ttcaagaaga ggtgttaaaa tcaattgata tgatttgtga atttgatgaa
      661 tttataagga ttttggtatc aattggtgtt attggttctt taattagggt tttgggagga
      721 ggaacttatt cgagtaaatg tttgtccacc aggtgtttga tgaaatgcac agctgaatgt
      781 gaaaacgctt ggtcagtttc ggctcatggt ggggtgacat ctttgttgcg aatttcggct
      841 agtgagaatg atagtagtga tgagttggtt ggtttagctt gtggggtgtt gaaaaatctt
      901 gttggtgttt atgaaatcaa acgttttata gttgaagaag gcgcgattac gatttttgtt
      961 aatcttgtta agtctaggaa tgaagtttct cagatcagtg ctattgaatt tcttcaagct
     1021 atttcttttg gagatcaaaa agtggcggat tctattgcta atgaaggtgg gattcgtgtt
     1081 ttggttcatg ttttggatcc aaagttgtcg ttttcatcaa aaaccagaga gaggtctata
     1141 agggcgatca tgtgtttgtg ttctgattta acaggaatgg ataggttatt aagttacggt
     1201 ttcatggatc acatacttta ttttcttcac aatggtgata tatctgttca agaagcatca
     1261 ttaaaagctg cgttttggtt aagtgggata tcggatgata tcaagaaagc tatgggagaa
     1321 gtaggatttt tgcaagaact tgtaaaatta gtgactgcaa agtcgtttga ggttcgtgaa
     1381 atggcatttt ccacattatc aaatttggtt tcaaacccta gaaaccgaaa aagatttgtg
     1441 gaaaacgatc aaaatgtgag cttgcttatg caatcaattg atcaagaaga aggaacttta
     1501 tgtcacaaaa agcttttact accaataatc atgtcattat caggatgcaa tagtggccga
     1561 aagaaaattt tgagttctgg gtacttaaaa aacattgaaa aattagcaga tgaggaaatt
     1621 tcagatgcta gaaagattgt taagaaccta tcgtcgaaca gatttgttcg tatggttaaa
     1681 gggatttggc actaa
//
LOCUS       XM_071831789             474 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841574), mRNA.
ACCESSION   XM_071831789
VERSION     XM_071831789.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..474
                     /gene="LOC139841574"
                     /note="uncharacterized LOC139841574; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841574"
     CDS             1..474
                     /gene="LOC139841574"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687890.1"
                     /db_xref="GeneID:139841574"
                     /translation="MWETFKQVKINLPLLDAIRQLPYYAKFLKDLCTQKRKQRASLPK
                     NMELTDHLSAVIFGTLPHKFKDPGTPLIAVNVGNVNVKKALLDLGASINILPFCLVDR
                     FELCLMKRTDIIIQLEDQSIKTPRGMLEDVIVKVEDFYYPVYFVMMDIEPKNRDV"
     misc_feature    214..462
                     /gene="LOC139841574"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(259..261,265..267,271..273,343..351)
                     /gene="LOC139841574"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    259..267
                     /gene="LOC139841574"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    259..261
                     /gene="LOC139841574"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(343..354,364..375)
                     /gene="LOC139841574"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgtgggaaa cgtttaagca agttaagatt aatttgcccc ttcttgatgc tattaggcaa
       61 ctcccgtact atgctaagtt tttgaaagac ctttgcactc aaaagaggaa gcaaagggcg
      121 tctttaccca agaatatgga gctaaccgat cacctaagtg cggttatttt cggtacactc
      181 ccacacaagt ttaaggaccc ggggacccca ttgatagcgg tgaatgtagg aaacgtgaat
      241 gtgaaaaagg cgttgttgga cctgggagcg agtattaaca tcttaccctt ttgtctagtt
      301 gaccgttttg aattatgttt aatgaaaaga accgacataa ttattcaact agaagaccaa
      361 tcgattaaaa ctcctagggg aatgttagaa gatgtgatag tgaaagtaga ggacttctac
      421 tacccggttt actttgttat gatggatatt gaacctaaga atagagatgt ataa
//
LOCUS       XM_071831790            1452 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841575), mRNA.
ACCESSION   XM_071831790
VERSION     XM_071831790.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1452
                     /gene="LOC139841575"
                     /note="uncharacterized LOC139841575; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841575"
     CDS             1..1452
                     /gene="LOC139841575"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687891.1"
                     /db_xref="GeneID:139841575"
                     /translation="MKVLKSCLNKKDFIWTEEAEAAFHDIKRLLNELPTLTAPIAGET
                     LILYLAASAEAISPVLIAEQKGIQMPIYFVNQPIKHILRNPESSGRLAKWAIELGDYE
                     INFSPRHAVKEYEALLSGLRITSEMGIKHLRAYVDSQIVAQQVNGGFEAKDVSMKQYL
                     QLVEKISKNFETLEVVQIPRNKNKKANVLSKLATLTFDHLHKKVLVEDGILPTDVTEA
                     RRIRVSAPLYVLENGVLYRKSFSGPNLRCLTPQQAIEWAIDIVGPFPRSVGNAKFLVV
                     AIDFFSKWVEAKVLAWITGENIKKFVWNDIVCRYGLPNEIVSDNGKQFADNPFRSWCE
                     ELNIKQTFTSVAHPQANGQVEVTNKEIVDDMKARLGLSQTKWVDEVPHILWAHRTTPK
                     WSTGETPFSLVYGTEAVIPAEICIPTQREGDLVLRDNEASRHEKQGNLGPRWEGPYKI
                     IKANPNGSYTLTAPSGEEIPRTWNAMSLKKFYA"
     misc_feature    43..>252
                     /gene="LOC139841575"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    <337..579
                     /gene="LOC139841575"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    <766..1065
                     /gene="LOC139841575"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgaaggtcc taaaaagctg tttgaacaaa aaggatttta tatggacaga agaagctgag
       61 gcagcttttc atgatattaa gcggctttta aatgaattgc ctaccttaac tgccccaata
      121 gctggagaaa cgctaatttt atatttagca gcatccgcag aagccattag tccagtttta
      181 atagcagaac agaagggcat acaaatgcca atatattttg tcaaccagcc aataaaacat
      241 attttgagaa atccagagtc ttcaggacga ttagcaaaat gggcaattga attaggggat
      301 tatgaaataa atttctcgcc tcgacatgca gttaaagaat atgaagcgtt gctttccggc
      361 ctccgcataa cgtctgaaat gggaataaaa catttgcgtg catatgttga ttctcaaatt
      421 gtagcacagc aagttaatgg agggtttgag gcaaaagatg tctctatgaa acagtatttg
      481 cagttggttg agaaaatttc aaaaaatttt gaaaccttgg aagttgtgca gataccaaga
      541 aataagaaca aaaaggcaaa tgtcctgagc aaattagcaa cattaacatt tgatcatttg
      601 cataagaaag ttttagtgga ggacggaata ctgccaacag atgtcacgga agcaagacgg
      661 ataagagtta gtgctccact ttatgtcctg gaaaatggag tgctttatag aaaatccttc
      721 agtggtccaa atttgaggtg tttgacacca cagcaagcaa tcgagtgggc aattgacata
      781 gtagggccat ttccaagaag tgtaggaaat gcgaagtttt tggtggttgc aattgatttt
      841 tttagtaaat gggttgaagc aaaggtgtta gcatggataa cgggtgaaaa tataaaaaag
      901 tttgtatgga atgatatcgt ctgtagatat ggtttgccaa atgaaattgt aagtgataat
      961 ggtaagcaat ttgcagataa tccgttcaga agttggtgtg aagaattgaa tattaaacaa
     1021 acatttacct cagttgctca cccacaggcc aatggtcaag ttgaagtaac caataaagaa
     1081 attgtagacg acatgaaggc tagattggga ttgagccaaa ctaaatgggt agatgaagta
     1141 ccacatattt tgtgggctca ccgtacaacg ccaaaatgga gcacgggtga aacaccattc
     1201 agcttggtgt atggtactga ggcagtaata ccagctgaaa tctgtattcc aacacaaagg
     1261 gaaggagatt tagtgttgag agacaatgaa gcaagcagac atgaaaagca agggaattta
     1321 ggaccacgat gggaaggtcc ctacaaaatc ataaaggcaa atcctaatgg atcatatacc
     1381 cttacagcgc cctccggcga agaaattcca agaacatgga acgcaatgag cttaaagaaa
     1441 ttttatgcgt ag
//
LOCUS       XM_071831791             390 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841577), mRNA.
ACCESSION   XM_071831791
VERSION     XM_071831791.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..390
                     /gene="LOC139841577"
                     /note="uncharacterized LOC139841577; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841577"
     CDS             1..390
                     /gene="LOC139841577"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687892.1"
                     /db_xref="GeneID:139841577"
                     /translation="MHARWVAYLQQFPFTIKHKAGSSNQAADALSRRAALLITMTQEV
                     TGFELFCDLYATDVDFGTIWKRLPFEDFSKHDGYLFKGNRLCVPSCSLCEKLIRDMHS
                     DGLSGHLGREKTIFMLEERFYWPQFET"
     misc_feature    <7..102
                     /gene="LOC139841577"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    259..>375
                     /gene="LOC139841577"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcatgcac gttgggtagc gtatctacaa caattcccat ttactatcaa gcacaaagca
       61 ggaagttcta atcaagcagc agacgcatta agcagacgtg cagcacttct catcacaatg
      121 acacaagagg tgactggatt tgaattattt tgtgacctat atgctactga tgttgatttt
      181 ggaactatat ggaagcgcct tccatttgaa gatttttcta aacacgatgg ctacctattt
      241 aagggaaatc ggttatgtgt cccaagctgc tctttgtgtg aaaagcttat tcgcgatatg
      301 catagtgatg ggttgagtgg tcatttgggt cgcgaaaaga cgatttttat gttggaagag
      361 cgattttatt ggccacagtt tgaaacgtga
//
LOCUS       XM_071831793             699 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841579), mRNA.
ACCESSION   XM_071831793
VERSION     XM_071831793.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..699
                     /gene="LOC139841579"
                     /note="uncharacterized LOC139841579; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841579"
     CDS             1..699
                     /gene="LOC139841579"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687894.1"
                     /db_xref="GeneID:139841579"
                     /translation="MSVDTTTETDNAITGMFLINSSPAHVLFDCGANLSFMSVTLCDK
                     LKLPINVLSEPLRIEVGDGRTVPVTTSVSGVTIEIDGNEFPMTCLVMPILSFDVVLGM
                     DWLSRHKASIKCDKKIIHFPLADGTRAVARGEQGGFNCPLISMMKAKKSLAKGCDSFL
                     AYVIDAKKEKKYVSDIPIVSEFPEVFPDELPDLPSVREVEYKIELFSGSTPVAKAPYR
                     IAPSEIRDMMSQIQ"
     misc_feature    1..378
                     /gene="LOC139841579"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(85..87,91..93,97..99,172..180,295..297)
                     /gene="LOC139841579"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..93
                     /gene="LOC139841579"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..87
                     /gene="LOC139841579"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(172..183,193..204)
                     /gene="LOC139841579"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgtcggttg atacaactac tgaaaccgac aatgcgatta ccggtatgtt tctgataaat
       61 tcttcgccgg ctcatgtgtt atttgattgt ggagcaaatc tctcttttat gtctgttaca
      121 ctatgtgata agttgaaatt gcctatcaac gtattatctg aacctttaag aatagaagtg
      181 ggtgatggta gaacggttcc agtcacaacc tctgtgtctg gagtaaccat tgaaatagat
      241 gggaatgaat tccctatgac ttgtcttgtt atgcctatac tgagctttga tgtcgtatta
      301 ggtatggatt ggttaagccg ccataaggca agtataaaat gtgataagaa aataattcat
      361 tttcctttgg ccgatgggac acgggctgtg gcccgtggtg aacagggcgg gtttaattgt
      421 ccattaattt cgatgatgaa agccaagaaa tcgttagcca agggatgtga ttcgttttta
      481 gcatatgtga tcgatgcaaa gaaagagaag aaatacgtgt ccgatatccc gatagtgtcc
      541 gaattcccag aagtgtttcc tgatgagtta ccggacttac cgtcagtaag agaggtagag
      601 tacaagattg aattattttc gggttctaca ccagtggcaa aggctccgta tcgaatagca
      661 ccgtccgaga ttcgtgatat gatgtcgcaa attcagtag
//
LOCUS       XM_071831794             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841580), mRNA.
ACCESSION   XM_071831794
VERSION     XM_071831794.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139841580"
                     /note="uncharacterized LOC139841580; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841580"
     CDS             1..570
                     /gene="LOC139841580"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687895.1"
                     /db_xref="GeneID:139841580"
                     /translation="MSVMSAACTVAHPQANGQYEVTNRDIVLGIKARLGLCRKGWIDK
                     LPNVLWAHCTTSKGATNETPFSLVYESEAVIPAEINVATMRIASFDESSNSEELRENL
                     NLVEERREMAAIKEAINKQRIASYYNKRIQPLSFQLDDLVWQKNEASRAEDTGKLGPK
                     WEGPYKVIGVSDAGAYRLVNLDGKTIKCT"
ORIGIN      
        1 atgtcggtca tgtcagctgc atgcaccgtt gcacaccctc aggcaaatgg ccaatatgaa
       61 gtaacaaatc gagatatcgt attaggtatc aaagcgagac ttgggctttg ccgaaagggt
      121 tggatagata aactaccaaa cgtgttatgg gcacactgca cgacctcaaa gggtgcaact
      181 aatgaaacac ctttcagctt ggtgtacgaa tccgaggcag taatacctgc ggagataaat
      241 gtggctacca tgcgcatagc ctcctttgat gaaagtagca atagcgaaga actgcgtgaa
      301 aatctcaatt tggttgaaga gcgcagggaa atggcggcaa taaaagaagc aatcaacaag
      361 caaagaattg caagctacta taataaacgc atacaaccat tatctttcca gttggatgat
      421 ttggtgtggc aaaaaaatga agcaagcaga gcggaagata cgggtaaact tggaccaaaa
      481 tgggaaggac catacaaggt tattggtgta agcgatgcag gggcgtatcg gttagtaaat
      541 ttagatggaa aaacaataaa gtgcacctga
//
LOCUS       XM_071831795             594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841581), mRNA.
ACCESSION   XM_071831795
VERSION     XM_071831795.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..594
                     /gene="LOC139841581"
                     /note="uncharacterized LOC139841581; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841581"
     CDS             1..594
                     /gene="LOC139841581"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687896.1"
                     /db_xref="GeneID:139841581"
                     /translation="MAKSRKPLIICCAVTLGLVLIISITSITLYFTLFKPKQPKITTQ
                     SVTLDSFSSDVFDITNTNVTLGVTITVNNPNYGGFKYENSTSYVTYHGDFVAEAPVME
                     DTIPARGVHDVSTTVLVVGKSLLTNPSFLGDLGSNTLNFTAITGLKGKAIVFKYFKKK
                     ATTMTTCDISVHIIGKNSTSVAYKLKNVVNLVVKYGW"
     misc_feature    13..528
                     /gene="LOC139841581"
                     /note="Late embryogenesis abundant protein; Region: LEA_2;
                     cl12118"
                     /db_xref="CDD:448410"
ORIGIN      
        1 atggctaaat ctcgaaaacc tctaataata tgttgcgcgg ttacacttgg attagtacta
       61 ataatttcaa tcacttcaat cacactttac ttcactcttt tcaagccaaa acaaccgaaa
      121 atcacaactc aaagtgtcac actagactcg ttctcatcag atgtatttga tataacgaat
      181 acaaatgtca cgttaggggt aacaatcacc gttaacaatc caaattatgg tggatttaaa
      241 tatgaaaata gtacatctta tgtgacttat catggagact ttgtggctga agcacccgtt
      301 atggaagaca caatcccggc tcgtggagta catgatgtta gtacgacggt tttggtggtt
      361 gggaagagtt tgcttacgaa tccgagtttt ttgggtgatt tgggtagtaa tactttgaat
      421 tttacagcta taacggggtt aaaagggaag gcaatagttt tcaagtattt caaaaagaag
      481 gctacaacta tgactacttg tgatatttct gttcatataa ttggtaaaaa ttcaacgtct
      541 gtagcttata aactcaaaaa tgttgtaaat ttagtggtta aatatggatg gtaa
//
LOCUS       XM_071831796            4029 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phospholipase A I-like
            (LOC139841582), mRNA.
ACCESSION   XM_071831796
VERSION     XM_071831796.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4029
                     /gene="LOC139841582"
                     /note="phospholipase A I-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841582"
     CDS             1..4029
                     /gene="LOC139841582"
                     /codon_start=1
                     /product="phospholipase A I-like"
                     /protein_id="XP_071687897.1"
                     /db_xref="GeneID:139841582"
                     /translation="MSWGLGWKRPSDIFHLSLYYGTDETFDDQNRLNPASSLLSTTSP
                     PPFSGSSSESSLKDHELGFRIDLDWNANEDDVQVALRLQSQVMVALPLPQDTVVIKLF
                     ECDDNLGNNVHGNNKLVCLGMEVVKQRDPLKAVAMSRVGGSGQHYDGLGVFSKLMTSD
                     FFGDQSGLGTGYGGGVGVRVCGDHWMNVTVVSMYSCSLSIFPVELTKLPLLEKLYLDH
                     NKLLVLPPEVGDLSNLKVLSVDYNILVSVPVDLRRCAGLVELSLEHNKLVCPLLDFRA
                     MNELRVLRLFGNLLEFLPEILPLHQLRHLSLANIRIVADEYLRTVNVQIETGNSSYFA
                     ALRHKLSAFFALIFRYSSCHHPLLASALAKMMQDEGNRVVIGKDENAVRQLISMISSD
                     NNHVVEQACSALTSLASDVTVALQLMKCDIMQPIQIVLKSAGPQELKSVLQVVAKLGF
                     VSDTGAQKMLNKDLIRSLKMLCAHKDPEVQRSALLAIGNLVFCVENRRLLVASESLGD
                     LLLRLMVSSEPRVKKAAARALAILGKNECLRRCIKGRQVAKQGLRILTMDGGGMKGLA
                     TVQILKELEKGTGKPIHEMFDLICGTSTGGMLAVALGIKLMSLEKCEDIYKNLGKLVF
                     AEPVPKDNEAATWRDKFDQLYKSSSQRFRVVVHGSKHCAIEFERLLKEICAEEDGDLL
                     IDSAVKRIPKVIVISTLVNVSPAQPFIFRNYQYPAGTPETPLTISENVATSGSVTSTT
                     GAQIGYKCGAHMGSCRHHVWQAIRASSAAPYYLDDYSDGVLRWQDGAIVANNPTIFAI
                     REAQLLWPDANIDTVVSIGCCTVPTKVRKGGWRYLDTGQVLIESACSTERIEDMLSTL
                     LSMIPEIQYYRFNPVDERCDMELDETDPTVWLKLEAATNDYITNNSAAFKKVCENLVQ
                     NHNDEKLHDSLNSPFKAKRPQTGENGPSLGWRRNVLLVKASNSPDSQKSCNHIQSLET
                     FCSKNGINIFLVEVSSETHKPVPETSFPSPFTSPLFKESFTSGPYNIRPHKMRRNNSL
                     PHLSLKNYVAKSFFPLESPIAPRQLSMPVQLLLDKLRNSPQVGVAHLALENDSNGSIL
                     SWQNDIFVVAEPGELAEKFLQSVKHSFQSMLRGGRRKYMSDISNISTLADLVACRPCF
                     QIGVVVHHFIGRQTQVNQDDQEIGAYMFRRTIPSMHLAPADVRWMVGAWRDRIIIYTC
                     LYGPIPALIKAFLDSGAKAVICPSKEPQETQLTTFHGSCDLTELQNAKFEIGLDEVEE
                     EDVGTTSPTSDWENMTERNSISTNQGTLIWDDDDEHELSKFICQIYDSIHLGGDTVDV
                     ALQQARVLHRTMRYTCHLPRML"
     misc_feature    <559..>936
                     /gene="LOC139841582"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     Region: LRR; COG4886"
                     /db_xref="CDD:443914"
     misc_feature    562..630
                     /gene="LOC139841582"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    631..699
                     /gene="LOC139841582"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    700..768
                     /gene="LOC139841582"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    769..837
                     /gene="LOC139841582"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    838..903
                     /gene="LOC139841582"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    order(1069..1071,1078..1080,1087..1092,1192..1197,
                     1204..1206,1213..1218,1225..1227,1318..1323,1336..1338,
                     1345..1350,1357..1359,1441..1446,1453..1455,1462..1467,
                     1567..1572,1579..1581,1588..1593)
                     /gene="LOC139841582"
                     /note="putative peptide binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:293787"
     misc_feature    1075..1599
                     /gene="LOC139841582"
                     /note="HEAT repeat [General function prediction only];
                     Region: HEAT; COG1413"
                     /db_xref="CDD:441023"
     misc_feature    1141..1227
                     /gene="LOC139841582"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1261..1362
                     /gene="LOC139841582"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1387..1467
                     /gene="LOC139841582"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1507..1596
                     /gene="LOC139841582"
                     /note="HEAT repeat [structural motif]; Region: HEAT
                     repeat"
                     /db_xref="CDD:293787"
     misc_feature    1633..2703
                     /gene="LOC139841582"
                     /note="Patatin-like phospholipase domain containing
                     protein 8; Region: Pat_PNPLA8; cd07211"
                     /db_xref="CDD:132850"
     misc_feature    order(1678..1683,1687..1689,1777..1779,2353..2355)
                     /gene="LOC139841582"
                     /note="active site"
                     /db_xref="CDD:132850"
     misc_feature    1771..1785
                     /gene="LOC139841582"
                     /note="nucleophile elbow; other site"
                     /db_xref="CDD:132850"
ORIGIN      
        1 atgtcatggg gattaggttg gaaaaggcca tcagatatat tccatctatc attatactac
       61 ggtacggatg aaacgtttga cgatcaaaac cgattaaatc cagcatcatc attgttatca
      121 acaacatccc caccaccttt ttcaggatca tcatctgaat catcgttaaa agatcacgaa
      181 ttaggctttc gtatagacct tgattggaat gcgaacgaag atgacgttca agtcgcgtta
      241 aggcttcaat ctcaagtgat ggtagcctta cctttaccac aagataccgt tgtaatcaaa
      301 ttattcgaat gtgatgataa tttgggtaat aatgtgcatg ggaataataa gttggtgtgt
      361 ttgggtatgg aagttgtgaa gcagagggac ccacttaaag cggtggctat gtcacgagtc
      421 ggtgggagtg ggcagcatta cgacgggttg ggtgtgttta gtaagttgat gacttctgat
      481 ttttttggag atcagtcggg tttgggtacg ggttatggtg gtggggtcgg ggttagagtt
      541 tgtggggacc attggatgaa tgttactgtt gttagcatgt atagttgcag tttatctata
      601 tttccggtag agttgactaa actgccactt cttgagaagc tgtatcttga tcataataaa
      661 ctgttagttt tgccacctga agttggcgat ttatcaaacc ttaaagtatt gtcagttgac
      721 tacaacatat tggtttcagt accagttgat ttaagacgat gcgctggact agtggaatta
      781 tcacttgaac acaataaact agtctgtcct cttcttgatt tcagggccat gaatgagtta
      841 cgtgttctta ggctttttgg taatctgctt gagtttcttc ccgaaatttt gcctttgcac
      901 caactccgac acctttctct tgcaaacatt cgtatcgttg cagatgagta tctaagaacc
      961 gtgaatgtcc agatagagac ggggaatagt tcatactttg ctgctttgcg acacaagcta
     1021 agtgcgtttt ttgctcttat atttcgctat tcatcatgtc accatccttt gcttgcctct
     1081 gcccttgcaa agatgatgca agatgaagga aaccgtgtag ttatcggtaa agatgaaaat
     1141 gcagtacgac aactcataag catgataagt agtgacaata atcatgtggt tgagcaagct
     1201 tgttctgcac ttacgtctct tgcctcggat gtaactgtcg cacttcagtt gatgaaatgt
     1261 gacatcatgc aaccgattca aatagttctg aaatctgcgg gcccgcaaga gctgaaatcc
     1321 gttttgcaag ttgtggctaa gttggggttt gtctctgata caggggccca aaaaatgttg
     1381 aacaaagatc tcataagatc attaaaaatg ttgtgtgcac ataaagatcc agaggtacaa
     1441 aggtctgctt tattagctat tgggaacttg gtgttctgtg tagagaaccg tcgtcttctt
     1501 gttgcttctg aaagtttggg cgatcttctt ttacggctta tggtttcatc tgaaccacga
     1561 gtgaagaaag ctgcagctcg tgctctcgcg attctcggca agaacgagtg tctgcggcgt
     1621 tgtattaaag gacggcaggt ggcaaaacaa ggactaagaa tacttacgat ggacggaggt
     1681 gggatgaaag gtcttgcaac tgtacaaatt cttaaagaac tcgaaaaggg tacagggaaa
     1741 ccaatacatg agatgtttga ccttatatgt ggcacatcaa ctggtggcat gcttgcagtt
     1801 gctctaggaa taaaactcat gtctttagaa aaatgtgaag atatatacaa aaatctcgga
     1861 aaacttgttt ttgcggagcc cgttccaaag gataacgaag ctgcaacatg gagagacaag
     1921 tttgatcagc tttataaaag ctcatcgcaa aggtttagag tcgttgtaca tggatccaaa
     1981 cactgcgcaa ttgagtttga gagattattg aaagaaatat gtgcagaaga ggatggagat
     2041 cttttaatag actctgcggt aaaaaggatt ccaaaagtta ttgtaatttc aactttagtc
     2101 aatgtgtcac cagctcaacc atttatattt cgtaactatc agtaccctgc gggcacacca
     2161 gaaactcctt taacaatatc agaaaacgta gcaacgagtg ggtccgtaac atcaacgact
     2221 ggcgctcaaa ttggatacaa atgtggggcc catatgggaa gttgcagaca tcatgtatgg
     2281 caagcgatac gagcatcatc cgctgctccg tattatcttg acgattactc tgatggtgta
     2341 ctacgatggc aagatggcgc cattgttgca aataatccta caatatttgc aataagagaa
     2401 gcacaactct tatggccaga tgccaatatt gacaccgtag tttcaattgg ttgttgtact
     2461 gttccaacta aggttcgaaa aggtggttgg cgttatttgg acactggcca agtgttgatc
     2521 gagagtgcat gctcaactga gcgtattgag gatatgttaa gcactttgct ctccatgatt
     2581 ccggagattc agtattatcg attcaatcca gttgatgaac gttgtgatat ggagttggat
     2641 gagacggacc ccacagtatg gcttaagttg gaggcagcca ctaatgatta tatcacgaat
     2701 aactctgcag cttttaaaaa agtgtgcgag aatttagtgc agaaccataa tgatgagaaa
     2761 ttgcatgata gtctaaattc tcctttcaaa gcaaagcgcc cacaaactgg tgaaaatgga
     2821 cccagtctag gttggagacg taacgtgcta ctcgtgaagg cttctaatag tccagattct
     2881 cagaaaagtt gtaaccatat acaatcactc gagacatttt gttctaaaaa cggaataaac
     2941 atatttctag tcgaagtgtc atcagaaaca cataaaccag taccagaaac atcatttcca
     3001 tcgccgttta cgtcaccatt attcaaagaa agcttcactt cgggcccata taatatacgg
     3061 cctcataaga tgagaagaaa taattccttg ccacatttaa gtctaaaaaa ctacgtagcg
     3121 aaaagttttt ttcccctaga atcgccaata gcacctagac agctgtcaat gcctgtacag
     3181 ttgttgcttg ataagttgcg aaattcaccc caagttggag ttgctcattt ggctcttgaa
     3241 aatgattcaa atggttccat actgagttgg caaaatgata tatttgtggt agctgaaccg
     3301 ggtgaacttg cagaaaagtt tctgcaaagt gtcaaacata gttttcagtc aatgttaaga
     3361 ggagggcgtc ggaaatacat gtcagatatt tcaaacatct caacacttgc cgatttggtc
     3421 gcgtgtagac cttgtttcca gattggtgtt gttgtacatc actttatagg acgccaaact
     3481 caggtcaatc aagatgatca agaaattggg gcttatatgt ttcgcaggac gattccttct
     3541 atgcatttgg ctcctgctga tgttcgctgg atggttggtg cttggaggga cagaataata
     3601 atctacacgt gtttatacgg gccaattcca gctctaataa aagcgtttct agactcgggt
     3661 gctaaagcag ttatctgccc atcaaaagag ccccaagaaa cacagttaac gacattccat
     3721 ggatcttgcg acttaactga attacagaac gcgaaatttg aaatcggatt ggatgaagtt
     3781 gaagaagagg atgtggggac cacaagtcca accagtgatt gggaaaacat gactgaaaga
     3841 aattcaataa gtacaaatca gggaactttg atttgggatg atgatgatga acatgaacta
     3901 tcaaaattca tatgtcagat ttatgattca atacatttgg gaggagatac agttgatgtt
     3961 gctttacaac aagctcgtgt gttacatcga acgatgaggt atacgtgtca tctcccacgg
     4021 atgttgtga
//
LOCUS       XM_071831797             579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841583), mRNA.
ACCESSION   XM_071831797
VERSION     XM_071831797.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..579
                     /gene="LOC139841583"
                     /note="uncharacterized LOC139841583; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139841583"
     CDS             1..579
                     /gene="LOC139841583"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687898.1"
                     /db_xref="GeneID:139841583"
                     /translation="MTVAGSNNDLNVLNASNLFNSMLNEETEDIPFTVNGVEYKRGYY
                     LAGGIYPGWASFVKAFSSANDEKRKYFSKKQAAARKDVERTFGILQGRWHILQQPARA
                     YSVNVMKQMMYTCIILHNIIVEDNGFALTKNDWVYEPVHNMQTTWIEMCETYRRRTKE
                     LRDRKVHEGLRSDLVEHVWANRETSESETESD"
     misc_feature    <10..381
                     /gene="LOC139841583"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgacagttg cgggttcaaa caacgactta aacgtcttga acgctagtaa tctcttcaac
       61 tcaatgctta atgaagaaac agaagatatt ccttttactg taaatggggt tgagtacaaa
      121 agaggatatt atctagcggg cggtatatat cccgggtggg catcatttgt taaggcgttt
      181 tcaagtgcaa atgatgaaaa acgtaagtac ttttcgaaga aacaagcagc ggcacgcaag
      241 gatgttgaga ggacttttgg tattttacag gggcgttggc atatactaca acaaccagca
      301 agggcatata gcgtcaatgt aatgaaacaa atgatgtata cgtgcattat cttacacaac
      361 ataattgttg aagataatgg ttttgctcta acaaaaaatg attgggttta cgaacccgtt
      421 cataatatgc aaacaacttg gatcgagatg tgcgaaactt acaggaggag gacgaaagaa
      481 ttacgagata ggaaagtgca tgagggccta cgatcggatt tggttgaaca tgtatgggct
      541 aatcgtgaga cgtcggagtc agagacggag tcggattaa
//
LOCUS       XM_071831798             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841584), mRNA.
ACCESSION   XM_071831798
VERSION     XM_071831798.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139841584"
                     /note="uncharacterized LOC139841584; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841584"
     CDS             1..570
                     /gene="LOC139841584"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687899.1"
                     /db_xref="GeneID:139841584"
                     /translation="MENSTCGIKQKTHLAALMHEARLIIWDEAPMTQRYAFEALDKTL
                     RDILGSKNEANRTKLFGAMPILLGGDFRQIIPVIPKGKRQEVVNACINRSELWKFCHL
                     HTLSRIMRVNEYTLDGQIDSRKRAFNKWVLDVGDGNVPASSKDGDDEPSWIKIPEEFI
                     VKNGINPIETIVDTIFPEFHLRQDDEDYL"
     misc_feature    <4..>567
                     /gene="LOC139841584"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atggaaaata gtacatgcgg tataaagcaa aaaacacatt tggctgccct aatgcacgaa
       61 gcaagactaa taatctggga cgaagctcct atgactcaaa ggtacgcctt tgaagcattg
      121 gataaaactc ttagagatat cttgggttct aaaaatgagg caaatagaac caagttattt
      181 ggtgctatgc caattttgct aggtggggac tttagacaaa tcatcccagt cattccaaaa
      241 ggtaaaaggc aagaggtagt taacgcatgc atcaatagat cagaattatg gaaattctgt
      301 cacctacata cactctcacg cattatgagg gtcaacgaat acactttaga tggccaaata
      361 gatagtcgaa aacgcgcatt caataaatgg gttctagatg tgggggatgg taacgtgcct
      421 gcatcatcta aagatggaga tgatgaacca tcatggataa agattcccga ggaattcatt
      481 gtaaaaaacg gaataaaccc aattgaaaca attgttgata ccatattccc agaattccat
      541 ttgaggcagg acgatgaaga ctatttatga
//
LOCUS       XM_071831799            1885 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-ketoacyl-CoA synthase
            4-like (LOC139841585), mRNA.
ACCESSION   XM_071831799
VERSION     XM_071831799.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1885
                     /gene="LOC139841585"
                     /note="3-ketoacyl-CoA synthase 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 90 Proteins"
                     /db_xref="GeneID:139841585"
     CDS             64..1593
                     /gene="LOC139841585"
                     /codon_start=1
                     /product="3-ketoacyl-CoA synthase 4-like"
                     /protein_id="XP_071687900.1"
                     /db_xref="GeneID:139841585"
                     /translation="MAGNPNLNPPAVGIQINHRRRLPDFLQSVNLKYVKLGYHYLISH
                     LLTLCLIPIMIIILINASQMNPNDLHTLWIHLQYNLVSVIICSTVLVFGSTFYILTRP
                     KPVYLIDYSCYRAPDHLKAPYERFMKHSRLTGDFDDSSLEFQRKILERSGLGEETYVP
                     EAMHSIPPRPTMAAAREEAEQVMFGALDNLFLTTGLKPKDIGILVVNCSLFNPTPSLS
                     SMIVNKYKLRGNIKSFNLGGMGCSAGVIAIDLAKDMLQVNRNTYAVVVSTENITQNWY
                     FGNKKSMLIPNCLFRVGGSAVLLSNKSSDKSRSKYKLVHVVRTHKGADEKAFRCVYQE
                     QDDNGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFCTLIAKKLFNDKVK
                     PYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYE
                     LAYIEGKGRVRKGHRVWQIAFGSGFKCNSAVWKAMRNVKPSSISPWADCIDKYPVELI
                     S"
     misc_feature    103..1587
                     /gene="LOC139841585"
                     /note="3-ketoacyl-CoA synthase; Region: PLN02377"
                     /db_xref="CDD:166018"
     polyA_site      1885
                     /gene="LOC139841585"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatcacttaa acaaataaat caatttcccc aatctttgac tttttcgaat ccctcccacc
       61 accatggccg gaaacccaaa tctgaaccct ccggccgtcg gtattcagat caatcaccgc
      121 cgccggttac ctgatttcct tcagtccgtt aatctcaagt acgtcaaatt aggttaccat
      181 tatttaattt ctcatttatt aactctgtgt ttaatcccta tcatgattat tattttaatc
      241 aacgcatctc aaatgaaccc taatgatcta cacacattat ggattcattt acagtataat
      301 ctcgtttccg ttattatttg ttcaactgtt ttagtattcg gatccacttt ttacatcctg
      361 acccgaccta aacccgttta cttaatcgat tactcgtgtt atcgtgcacc tgatcacctt
      421 aaagcgccgt acgaacggtt tatgaagcat tctaggttaa ctggtgattt cgatgattct
      481 agtttagagt ttcaaaggaa gattttagaa agatctggat taggtgaaga aacttatgta
      541 cctgaagcta tgcattctat tcctcccagg ccgactatgg ccgcggcccg ggaggaagca
      601 gaacaggtca tgtttggtgc tttagataac ttatttttaa caactggttt aaaaccaaaa
      661 gatattggta tacttgttgt taattgtagt ttgtttaatc caacaccatc tttatcgtcc
      721 atgattgtga ataagtataa gttaagaggg aatattaaga gtttcaatct aggtggaatg
      781 ggatgtagtg caggtgttat tgctattgat cttgcaaaag acatgttaca agtcaatcga
      841 aatacttacg cagttgttgt gagtactgag aatatcacac aaaattggta ttttgggaat
      901 aagaagtcta tgttgattcc gaattgtttg tttagagttg gggggtcggc tgttctgtta
      961 tcgaataagt cgagcgataa gtcgagaagt aagtataagc ttgttcatgt tgtaagaact
     1021 cataaaggtg cagacgagaa agcgtttcgt tgtgtttatc aagaacaaga tgataatggt
     1081 aagactggtg tttcgttatc gaaagatttg atggcgattg caggtggtgc gttgaaaact
     1141 aatatcacga ctttaggtcc gcttgtgttg ccgattagtg aacaactttt gttcttttgt
     1201 actttgattg ctaagaaatt gtttaatgat aaagtgaagc cttatattcc tgattttaag
     1261 ttagcgtttg atcatttttg catacatgct ggtggccgag ctgttattga tgagcttgag
     1321 aagaatttgc agttgttgcc tgtgcatgtt gaggcgtcac gaatgactct tcatagattt
     1381 gggaacacgt cctcgagttc tatttggtat gagttggctt atattgaagg taaaggaagg
     1441 gtaagaaagg gtcatagagt ttggcagatt gcgtttggaa gcgggtttaa gtgtaatagt
     1501 gcggtttgga aggcgatgag gaatgtgaaa ccgtcaagta ttagtccgtg ggctgattgt
     1561 atcgataagt atcccgttga attgatctct taattggtat tcagatttca gcattttgtg
     1621 ttcaggtaaa aagaaaaggc actattattg gtatgcttgg tttagcgttg tgctcgtttc
     1681 ttcagttccg gtttcagcgt ttaacgaact ggttttgatc atctgagttg aattcattgt
     1741 tttgtttcag tgtttgtgct tgtgttctct tgggtactac taatttatgt gaatttatta
     1801 aacaattgtt atgtttaaga taagaagttt ttgaatagtg tggcatgtaa tgcaccctaa
     1861 tgactagtat aaagtcttta tatca
//
LOCUS       XM_071831800             633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841586), mRNA.
ACCESSION   XM_071831800
VERSION     XM_071831800.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..633
                     /gene="LOC139841586"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841586"
     CDS             1..633
                     /gene="LOC139841586"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687901.1"
                     /db_xref="GeneID:139841586"
                     /translation="MRYFLGISVTRQPNSLFLNQTTYVKDIIARAGLSNCNPVRTPVD
                     TSPKLGAKEGLPVADPTKFRILAAALQYLTFTRRDISYAVQQICLHMHDPRESHLHAL
                     RRCPDTRRSTSGYCVYFRDNLISWSSKRQPTLSRSSAEAEYRGVANVVSDTCWIRNLL
                     LELHCPLPKCTLVFCDNVTAIYLFDKYGRDFDLGNKLYSRPILVYIVDMD"
     misc_feature    <1..129
                     /gene="LOC139841586"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    313..>549
                     /gene="LOC139841586"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcgctatt ttctgggcat atctgttacg cgccaaccta atagtctctt cttaaatcag
       61 acaacatatg tgaaagatat tattgctcgt gccggtttgt ccaattgtaa tccggtacgt
      121 actcctgttg acacctctcc taaactcggt gccaaggaag gtttaccagt cgcagatcct
      181 actaagtttc gaattcttgc agcggcccta caatacttaa cctttactcg ccgggacatt
      241 tcttatgcag ttcaacaaat ttgtcttcac atgcatgatc cgagggaatc tcatttgcat
      301 gcattacgac gatgtcccga tactcgacgt tctacgtccg gatactgtgt ttatttcaga
      361 gataacctca tatcttggtc ttctaagcga caacctactt tgtcccgttc gagtgccgag
      421 gcagaatacc gcggggtagc caacgttgta tccgatactt gttggattcg caatctcctt
      481 ttagagctac attgtccgtt gcctaagtgt actctagttt tttgtgataa tgtcaccgcc
      541 atttatcttt ttgataaata tggtagggat tttgacttgg gcaacaagct atacagccga
      601 cccattcttg tatatatagt cgatatggat taa
//
LOCUS       XM_071831801            1137 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841587), mRNA.
ACCESSION   XM_071831801
VERSION     XM_071831801.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1137
                     /gene="LOC139841587"
                     /note="uncharacterized LOC139841587; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841587"
     CDS             1..1137
                     /gene="LOC139841587"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687902.1"
                     /db_xref="GeneID:139841587"
                     /translation="MSDKSPNPYHPAITVTKIRNFIPIILESDKSQYNTWSELFQIHC
                     RAYDVIDHIIPTETTSTESTTSTIYSTISHDLLNTIITKNTTAQKAWERLRTIFQDDE
                     HSRALYLNAQFTNLRMENFPNMSAYCQELKNLSDQLSNVGETVNNSRLVLQLIAGLHD
                     SYDSVSSQIAHAKVLPDFYEARSMVILEETRKQKQASHLSEAALITTTTSGSNKQLGS
                     SNSPNNPRSTQTNSSNYRGCGGGRGSGYRGRGGCGRGKQSCNNFSQPWYASGFQSHPW
                     HNSQPWNSSNSAQYANWAWKPWSIPPCPYPSSSWVKPHQPTAGPGILGPRPNQTQSTM
                     ASQNNFAPTDIDAAFHTLSLYPPDDNWYMVGIWIQVPPRIWLPL"
     misc_feature    235..585
                     /gene="LOC139841587"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcagata aatccccaaa tccctatcac cctgctatta cggtgactaa gatccgtaat
       61 tttatcccta tcattctcga atccgacaaa agccaataca acacttggtc ggagctattt
      121 caaattcatt gtcgggccta tgatgttatt gatcatatca ttccaaccga aaccacttct
      181 acagaatcta ccacctctac catttacagc acaatttcac atgatctgtt gaacacaatc
      241 attacgaaaa acacaacagc tcaaaaggct tgggagcgtc ttcggactat tttccaggat
      301 gatgagcact cacgtgctct ttatctcaat gctcaattta cgaatttacg aatggagaac
      361 ttcccaaaca tgtcagcata ctgccaggag ttgaagaatc tttctgatca attatccaat
      421 gtgggcgaaa ctgtgaacaa cagcagattg gtactacaac tcattgccgg gttacacgat
      481 tcatatgata gtgtttcctc acagattgca catgccaaag tattaccaga tttctatgaa
      541 gcccggtcga tggttattct cgaagaaact aggaagcaga aacaagcaag tcatctttca
      601 gaagctgcct taatcaccac cactacttct ggctctaata agcaattggg cagtagcaat
      661 tcacccaata accctcgatc aacacaaact aattcttcca attatcgtgg ttgtggtggt
      721 ggtcgtggtt ctggttatcg tggacgaggt ggttgtggta gaggaaagca atcgtgtaac
      781 aatttttcgc aaccttggta cgcttcaggt tttcaatcac atccgtggca taactcgcaa
      841 ccctggaaca gttctaattc ggcccaatat gctaattggg cctggaagcc atggtccatc
      901 ccaccgtgcc catacccatc ttcttcttgg gtcaaacctc atcagccaac tgcaggtcca
      961 ggaatattgg gtcctaggcc caaccaaacc caatccacta tggcttctca aaataatttt
     1021 gcacctactg atatagatgc agcctttcat accttgtcgt tgtatccgcc tgatgataat
     1081 tggtatatgg ttggtatatg gatacaggtg ccacctcgca tatggcttcc tctttag
//
LOCUS       XM_071831802             732 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841588), mRNA.
ACCESSION   XM_071831802
VERSION     XM_071831802.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..732
                     /gene="LOC139841588"
                     /note="uncharacterized LOC139841588; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841588"
     CDS             1..732
                     /gene="LOC139841588"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687903.1"
                     /db_xref="GeneID:139841588"
                     /translation="MPKKIMDSLTKDALDIASSNFNIVALDLLDKIDKDEEEEIVQPI
                     LRAPRRFIHRDREGTAMRLWNDYFSENPTFPGDYFRRRYRMSRPLFICICQGIMNYSQ
                     EPIPDYFLYFHQKRDATGLLGFNVFQKCTSAIRQLAYGTAPDAFDEYLNMSQQTSYDC
                     LNNFCKSLIHLYGSEYMRKPTPQDVARLVSAHAELYGFLGMLGSLDCMHWAWKSCPYK
                     YKGHYTRGDHGYPTFMLKAMASYDL"
     misc_feature    520..>729
                     /gene="LOC139841588"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcctaaaa aaattatgga tagtcttacg aaagatgcgt tggatattgc aagttctaat
       61 ttcaatatcg tcgcactcga tctacttgat aagatagata aagatgaaga ggaagaaatc
      121 gttcaaccaa ttctaagggc gcctagaaga tttattcata gagaccgaga gggaaccgcg
      181 atgcgtttat ggaatgatta tttttccgag aatcccactt tccccggaga ttattttcgt
      241 cgccgttata ggatgagtcg accattgttt atatgcatat gccaaggtat aatgaattac
      301 tctcaagaac ctattcccga ttatttttta tattttcatc aaaagcggga tgctaccggg
      361 ttgttgggtt ttaatgtttt ccaaaaatgt acatccgcga tacgccaatt agcatacggt
      421 actgcacctg atgcttttga cgagtactta aatatgagcc aacaaacatc atatgactgt
      481 ttgaataatt tttgtaaaag cttgattcac ttgtacggtt cggagtatat gagaaaaccg
      541 actccacaag acgtagcacg tcttgtatcc gcacatgcgg aattatatgg ttttctggga
      601 atgttgggta gtctagattg tatgcattgg gcatggaaaa gttgcccata taaatataaa
      661 ggtcattata ctagaggcga tcatggctat ccaacattca tgttaaaagc tatggcatct
      721 tatgatttat ga
//
LOCUS       XM_071831803             732 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841589), mRNA.
ACCESSION   XM_071831803
VERSION     XM_071831803.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..732
                     /gene="LOC139841589"
                     /note="uncharacterized LOC139841589; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841589"
     CDS             1..732
                     /gene="LOC139841589"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687904.1"
                     /db_xref="GeneID:139841589"
                     /translation="MPKKIMDSLTKDALDIASSNFNIVALDLLDKIDKDEEEEIIQPI
                     LRAPRRFIHRDREGTAMRLWNDYFSENPTFPGDYFRRRYRMSRPLFICICQGIMNYSQ
                     EPIPDYFLYFHQKRDATGLLGFNVFQKCTSVIRQLAYGTAPDAFDEYLNMSQQKSYDC
                     LNNFCKSVIHLYGSEYMRKPTPQDVARLVSAHAELYGFLGMLGSLDCMHWAWKSCPYK
                     YKGHYTRGDHGYPTFMLKAMASYDL"
     misc_feature    520..>729
                     /gene="LOC139841589"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcctaaaa aaattatgga tagtcttacg aaagatgcgt tggatattgc aagttctaat
       61 ttcaatatcg tcgcactcga tctacttgat aagatagata aagacgaaga ggaagaaatc
      121 attcaaccaa ttctaagggc gcctagaaga tttattcata gagaccgaga gggaaccgcg
      181 atgcgtttat ggaatgatta tttttccgag aatcccactt tccccggaga ttattttcgt
      241 cgccgttata ggatgagtcg accattgttt atatgcatat gccaaggtat aatgaattac
      301 tctcaagaac ctattcccga ttatttttta tattttcatc aaaagcggga tgctaccggg
      361 ttgttgggtt ttaatgtttt ccaaaaatgt acatccgtga tacgccaatt agcatacggt
      421 actgcacctg atgcttttga cgagtactta aatatgagcc aacaaaaatc atatgactgt
      481 ttgaataatt tttgtaaaag cgtgattcac ttgtacggtt cggagtatat gagaaaaccg
      541 actccacaag acgtagcacg tcttgtatcc gcacatgcgg aattatatgg ttttctggga
      601 atgttgggta gtctagattg tatgcattgg gcatggaaaa gttgcccata taaatataaa
      661 ggtcattata ctagaggcga tcatggctat ccaacattca tgttaaaagc tatggcatct
      721 tatgatttat ga
//
LOCUS       XM_071831804            1419 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841590), mRNA.
ACCESSION   XM_071831804
VERSION     XM_071831804.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1419
                     /gene="LOC139841590"
                     /note="uncharacterized LOC139841590; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841590"
     CDS             1..1419
                     /gene="LOC139841590"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687905.1"
                     /db_xref="GeneID:139841590"
                     /translation="MEIALSTKKKIGFVTGTVVRSENDPVKAEAWDTCNNMQGNLVSD
                     YYTRFKCIWEELDSLSELPRISNVTPEVVAFLTTLNKQKEEEHLFQLLNGLDDKFSAL
                     RSQMLLMNPLPTVETACAMIQQEESKREMFTSVESTALYSKVSSDQKCTICVHKYHTP
                     GKCWEKIRYPPWHYKSKQQSKSKVSGHFKPKGGNNVKKTAAAVQGNNVIFTSEQFEKL
                     LKFLTQMTQNEVQCTVANSDDELDHHFAAGILSKNSLNNEWILDTRATDHMTPMSSSL
                     IDSTSLFFKPHIRLPNGNTSVISHVGKVKLYNQMELKTQKVIGLGRRKEDLYYLENVP
                     LDQIDKRLLQLLSSSVNDSSLFSIKDGCIANSSTLVKPYNLWHNRLGHISDSKMKIIP
                     SIQSKLVRDNVDGPYKVVTEDNALEFIKGQLGKYLADLGIEHQTSCADRPQQNGRVER
                     KHRHVLEIAKALRLQAQLPLKY"
     misc_feature    1063..>1200
                     /gene="LOC139841590"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    <1222..1407
                     /gene="LOC139841590"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atggaaattg ctttgtcaac caaaaagaag atcggatttg ttacaggtac tgttgttaga
       61 tctgaaaatg atccagttaa ggctgaggca tgggatacat gcaataatat gcaaggaaac
      121 ctagttagtg actactatac taggtttaag tgcatttggg aagaactaga ctctttgagt
      181 gaattgccta gaattagtaa tgttactcct gaggttgtgg catttctaac tactttaaat
      241 aagcaaaagg aagaggaaca cttgtttcag ttattgaatg gtttagatga taagtttagt
      301 gctcttagga gtcaaatgct gctaatgaat cctctaccta ctgtggaaac tgcttgtgca
      361 atgattcaac aagaagaatc aaaaagagaa atgttcacat ctgttgagtc aactgccctg
      421 tacagcaagg tcagttctga tcaaaaatgt actatttgtg ttcataagta tcatacacct
      481 ggcaaatgct gggaaaagat tagatatcct ccatggcatt acaagtctaa acagcagtca
      541 aaatcaaagg tgtctggaca ttttaaacca aaaggtggaa ataatgtcaa gaagactgct
      601 gctgctgttc aaggaaacaa tgtgatcttc actagtgagc agtttgaaaa gttgttgaag
      661 ttcttaacac aaatgacaca aaatgaggtt caatgtactg tagctaattc agatgatgaa
      721 ctggatcatc attttgcagc aggtatactt tctaaaaatt cattaaataa tgaatggatt
      781 ttggatactc gggctacaga tcatatgaca cctatgtcta gtagtcttat tgattctaca
      841 agtttattct ttaaacctca tataagactg ccaaatggta atacatctgt tatttcacat
      901 gttggaaaag ttaagttgta taatcaaatg gagttgaaaa cacaaaaggt gataggactg
      961 ggtagaagga aagaagatct ctactatctg gagaatgtac ctcttgatca aattgataag
     1021 aggctgctac aactgctttc atcttctgtt aatgattcta gtttgttttc aataaaggat
     1081 ggttgtattg caaattcaag tactcttgtg aagccttaca atttgtggca caatagactt
     1141 gggcatatat ctgactctaa aatgaagatc attccttcta tacaatctaa acttgtaaga
     1201 gataatgttg atgggccata taaggttgtc actgaagata atgcattaga gtttattaag
     1261 ggacagttgg gaaagtattt agcagatttg ggaatagaac atcaaacatc atgtgcagat
     1321 agacctcagc agaatggtag agtagaaaga aagcataggc atgttttgga aattgccaaa
     1381 gcattaagat tgcaagctca gttaccactg aaatattga
//
LOCUS       XM_071831805            2118 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841591), mRNA.
ACCESSION   XM_071831805
VERSION     XM_071831805.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2118
                     /gene="LOC139841591"
                     /note="uncharacterized LOC139841591; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841591"
     CDS             1..2118
                     /gene="LOC139841591"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687906.1"
                     /db_xref="GeneID:139841591"
                     /translation="MAKEDADKTAFHTGKVIFSYIMMPFGLINAGATYQRLIDTAFEK
                     QIGRNLEAYVDDLVIKITTQERIIGDMRETFDTLCRINMKLNPLKCSFGETEGKILGY
                     LVTEQGCLKQKSFVWTSEAETAFQEMKKLLKTLPTLIAPIDGETLYLYISVANEAFGS
                     VLVAERDKIQKPVYFLSKAITGSEINYAPIEKFVYALILTSRSTVKGQVLADYLAEMT
                     GELEVINERTDLKQVVGETWDLFTDGASCVEGAGAGLVLASPSGEEHTYTLRFNFDVI
                     NNEAEYEALLAGLNIARKMDITKLRAFTDSQLVANQFNGSFEAHDSSMQKYLQLLKEL
                     VVRFEHFELAQVPRSQNKKADASSKLAALMFLHFQKQVWVEELPSKSIDNDLMVASVV
                     EEQPNWMEPNLQYICSDILPSDKREARLVREQAPMYIIQNDILYRNSYCGPMMRCVGP
                     IEGKMIIDEVHNGSCAMHSCYKTIAAKIMRMGYFWPSLYRYVTKIVKRCKSCQRHAPQ
                     NRMPRHDMIPVNSPWPFHKWAIVIVGPFPAGPGNVKFLIMAIDYFTKWVEAKAVPTIT
                     GVQSTGETPFSLVYGSEAIIPAEILVPTHRVANFEEEANDDALGENLNFIKEQRLMTA
                     IREANNKQQIAKYYNKRVRALSFYVGEWVLRNNDASRAEKLGKLGPNWEGPYQVVAIN
                     AAVLRCFVTFKWRSDEIAHFRRK"
     misc_feature    <1..312
                     /gene="LOC139841591"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    76..78
                     /gene="LOC139841591"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    349..591
                     /gene="LOC139841591"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    712..1086
                     /gene="LOC139841591"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(727..738,826..834,841..843,913..915,1033..1035,
                     1075..1077)
                     /gene="LOC139841591"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    1360..1524
                     /gene="LOC139841591"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggctaaag aagatgcaga taaaaccgct tttcatacag gcaaagtcat attctcttat
       61 ataatgatgc cttttggttt aattaatgca ggtgcaacat atcaacgctt aattgacacc
      121 gcgttcgaaa aacaaattgg gcgaaatctt gaggcttatg tagatgattt agtaattaaa
      181 atcacaacac aagagcgaat tattggtgat atgcgggaaa catttgatac attgtgcagg
      241 ataaacatga agcttaatcc gctaaagtgt agttttggtg aaactgaagg aaagattttg
      301 ggatatcttg ttactgagca aggctgcttg aaacaaaaga gctttgtttg gacaagtgaa
      361 gctgaaaccg catttcagga aatgaagaag ttattaaaaa ctttgcctac gttaatagcg
      421 ccaattgatg gcgaaactct ttacctttat atatcggtag caaatgaagc ttttggctca
      481 gttctagttg cggaaaggga taaaatacaa aagcctgtgt attttctcag taaagctatt
      541 acaggaagtg aaataaacta tgcgccgatt gagaaatttg tgtatgcgct catactaaca
      601 tcgcgaagca ctgtaaaggg ccaagttttg gcggattatc tcgctgaaat gactggggag
      661 ttggaggtga ttaatgagcg aacagattta aaacaagtag ttggcgaaac atgggattta
      721 tttactgatg gagcttcatg tgtagaaggc gcaggtgcgg gtttggtttt ggcaagccca
      781 agtggtgagg agcatacgta cacgttacgt tttaattttg atgtgataaa taatgaagcg
      841 gaatatgaag ccttgcttgc tggtttaaat attgcgcgaa aaatggatat cactaaattg
      901 cgagcattta cagattcaca attagtagca aatcagttta atggctcttt tgaggcacat
      961 gattcctcaa tgcagaaata tttacagttg ttgaaagaat tggtagtgcg gttcgagcat
     1021 tttgaactcg cgcaagtgcc aagaagtcaa aataagaagg cggatgcttc gagtaagttg
     1081 gccgctctaa tgtttttgca ctttcagaaa caagtttggg ttgaggaatt gccaagcaag
     1141 tcaatagata acgacttaat ggtcgcgtct gttgtagaag aacagccaaa ttggatggaa
     1201 ccaaacctgc aatacatctg cagtgatatt ttgccaagtg ataagcgcga agctcgctta
     1261 gtaagagagc aagcaccaat gtatatcatt caaaatgaca ttttatatcg caattcatac
     1321 tgtggtccaa tgatgcgatg tgtgggccca attgaaggga aaatgataat tgatgaagtg
     1381 cataacggtt cttgtgcaat gcattcatgt tataaaacta tcgcggcaaa aattatgcgg
     1441 atgggttact tttggccatc cctatatcgc tatgttacaa aaattgttaa gcgttgtaaa
     1501 agctgccaaa ggcatgctcc acagaatcgg atgccaaggc atgatatgat ccctgttaat
     1561 tcgccatggc catttcacaa gtgggctatt gtcattgtag ggccatttcc cgcaggacct
     1621 ggcaatgtca aattcctgat tatggcaatt gactatttta caaaatgggt tgaagctaag
     1681 gcggttccca ctatcactgg tgtgcaaagc actggggaaa caccttttag tttggtgtat
     1741 ggctctgagg caataatacc cgctgaaatt cttgtgccaa cgcatagagt cgctaacttt
     1801 gaggaagaag caaacgatga tgcattgggt gagaatttga atttcattaa agagcaaagg
     1861 ttaatgactg ctatcagaga ggcaaataat aaacagcaaa ttgccaagta ttataacaaa
     1921 agagtgcgtg ctttatcttt ttatgtaggc gagtgggtac tgcgaaataa tgatgcaagt
     1981 agagcagaga aacttggcaa attaggacct aactgggagg gtccttatca agttgtggca
     2041 attaatgcag cagtgctgag gtgtttcgtg acgtttaaat ggcgaagtga tgaaattgcc
     2101 cactttcgca gaaaataa
//
LOCUS       XM_071831806            1473 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841592), mRNA.
ACCESSION   XM_071831806
VERSION     XM_071831806.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1473
                     /gene="LOC139841592"
                     /note="uncharacterized LOC139841592; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841592"
     CDS             1..1473
                     /gene="LOC139841592"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687907.1"
                     /db_xref="GeneID:139841592"
                     /translation="MSMMDSTWMTLCRSSPAYEKGLDKFIERIFSKKGKDGHIYCPCI
                     YCGNHKWVDRVQAKTHLLCDGFFEGYKIPTMFFKPDDTPMWDAKDDMQGLAQSVFHIF
                     EDEDEDDDIGQTENQTVPNLNAKKFYKILEDAKKELYPGCKFSVLSFIVRLFHSKCVG
                     KCNEKGFSMILDTIMEAFPLATIPNSWYELRKVIRYLGLGYKKIDACPNDCMLYWKEN
                     KDKIKCDVCQTSRYKQINNDSEGESTTQADNDGDYEGNKVGAKVLRYFTLIPRLQRLF
                     MSPKTAESMRWHEESRTKDGILRHPADSPAWKTFDYQNSEFSKEPRNVRLGLASDGFT
                     PFGNMSVSHSTWPVVLMPYNLPPWLCMKKSFLFLTLLIPGPSAPGNNIDVYMQPLVDE
                     LKELWDTGVNTYDASNKSNFTLRAGLIWTVSDFHAYANLSSWSTKGKLAYTSCHKLTR
                     SIRLSNSHKVIFIAHHRWLELLHAFRMDKDSFDGTEEHEG"
     misc_feature    19..213
                     /gene="LOC139841592"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    883..1464
                     /gene="LOC139841592"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atgtctatga tggactcgac ttggatgacc ttatgtagat cttcccctgc atacgaaaaa
       61 ggacttgaca aatttataga acgtattttc tctaaaaagg gaaaagatgg tcatatatat
      121 tgtccgtgca tatattgcgg taatcacaaa tgggttgatc gggtccaggc taaaacacat
      181 ttgctatgtg acgggttttt cgaaggttat aaaattccaa ctatgttttt caaaccagat
      241 gatacaccaa tgtgggatgc taaagatgat atgcaaggat tggcccaatc tgtcttccat
      301 atttttgaag atgaagatga agatgatgat atcggacaaa ctgaaaatca gactgtacca
      361 aacttaaatg ctaaaaagtt ttataaaata ttggaagatg caaagaaaga attatatccc
      421 ggctgtaagt tctctgttct ttcattcatt gttagactct tccattcaaa gtgtgttgga
      481 aaatgtaatg aaaaaggatt cagcatgatt cttgacacaa ttatggaagc cttccctctt
      541 gctaccatac cgaattcatg gtatgaatta aggaaggtaa taagatattt gggtcttggt
      601 tataagaaaa ttgatgcttg tccaaatgat tgtatgttgt actggaaaga aaataaggat
      661 aaaattaaat gtgacgtatg tcagacctca agatataaac aaattaataa tgattctgaa
      721 ggtgagtcaa ccacacaagc tgataatgat ggtgattacg aaggtaataa ggttggagca
      781 aaagtgttgc gttattttac actcatacca cgcttgcaaa gattgtttat gtcacctaaa
      841 acggccgagt cgatgagatg gcatgaagag agtcgtacga aagatggtat attaagacat
      901 cccgcagatt caccagcctg gaaaacattc gattatcaga atagtgaatt ttctaaagaa
      961 cctcgtaatg taaggcttgg tttggcgagt gatgggttta ccccttttgg aaacatgagt
     1021 gtttcacata gtacatggcc cgttgttttg atgccatata atctgcctcc atggttgtgc
     1081 atgaaaaaat cttttttatt cctaacttta cttatacccg gtccatctgc tccaggtaat
     1141 aatatagatg tctatatgca acctctagtt gatgagttga aagagttgtg ggatactgga
     1201 gttaatactt atgatgcatc aaataagagt aacttcacac tgcgtgctgg tttgatatgg
     1261 acggtaagtg actttcatgc ttatgcaaat ttatcgagtt ggagcactaa aggtaaatta
     1321 gcttatactt catgccataa gctaaccagg tcaatacggt tatcaaactc ccacaaagtt
     1381 atcttcatag cacatcatcg ctggttggaa ttgttgcatg ctttccgtat ggataaagat
     1441 tcttttgatg gcacagaaga acatgaaggg tga
//
LOCUS       XM_071831807             426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841593), mRNA.
ACCESSION   XM_071831807
VERSION     XM_071831807.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..426
                     /gene="LOC139841593"
                     /note="uncharacterized LOC139841593; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841593"
     CDS             1..426
                     /gene="LOC139841593"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687908.1"
                     /db_xref="GeneID:139841593"
                     /translation="MIWSRFSPNGVHRNCVIDFGTEKFDIDLVPLTLDEFYVVVGMDW
                     LNHNRAKLACHEKFVRVRTPSGGELVVYGKARRRPMTLCTYARARRLVSSGGMAYLAH
                     LVDTRDKPPSIKSIPIANEFEDVFLDELPGVPPVRQVEF"
     misc_feature    <19..198
                     /gene="LOC139841593"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atgatctgga gcagattcag ccctaatggg gtgcatagaa attgtgttat tgattttgga
       61 accgagaagt ttgatattga cttggttcct cttaccttgg atgaatttta tgttgtcgtg
      121 ggtatggatt ggctcaatca taatagggct aagcttgcgt gtcatgagaa atttgtaagg
      181 gtaagaaccc caagtggggg agagctagtc gtgtacggta aagctcgaag acgtcccatg
      241 actctttgta cttatgctcg tgcgcgtcga ctcgtatcaa gtggaggtat ggcttatcta
      301 gcccatctgg ttgatactcg tgataagcca ccttctatta aatctattcc tattgctaat
      361 gaatttgaag atgtttttct tgatgagtta ccgggtgttc cacctgtaag gcaagtagag
      421 ttttga
//
LOCUS       XM_071831808             345 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841594), mRNA.
ACCESSION   XM_071831808
VERSION     XM_071831808.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..345
                     /gene="LOC139841594"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841594"
     CDS             1..345
                     /gene="LOC139841594"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687909.1"
                     /db_xref="GeneID:139841594"
                     /translation="MYLTASRPDIMFTTCLYVRYQVNPNTVHPTATKLILCYLLHVLN
                     LGIWFFNDQTFDRVAYSDSGYAGCKINNKSTSRGCQFLSERLVTWQCKKQIAVVLSTC
                     EAEYIAAASCCS"
     misc_feature    172..>339
                     /gene="LOC139841594"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtatctaa ctgcatcaag accggatata atgttcacga catgtctcta tgtacgttac
       61 caagttaacc caaatactgt tcatcctaca gccaccaaac tgattttatg ttatctatta
      121 catgttctaa atcttggcat atggtttttc aatgaccaaa cgtttgatcg agtggcttac
      181 agtgattcag gctatgcagg ttgcaaaatc aacaacaagt caacatccag aggatgccag
      241 tttctaagtg aaaggttggt gacatggcaa tgcaagaaac agattgcagt tgtactttca
      301 acatgtgaag ctgaatatat tgctgctgct agttgctgtt cttaa
//
LOCUS       XM_071831809            1512 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841595), mRNA.
ACCESSION   XM_071831809
VERSION     XM_071831809.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1512
                     /gene="LOC139841595"
                     /note="uncharacterized LOC139841595; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841595"
     CDS             1..1512
                     /gene="LOC139841595"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687910.1"
                     /db_xref="GeneID:139841595"
                     /translation="MREAFPHAAIPKSLYELRKIIRDLGLGYEKIDACPNDCMLYWKE
                     NKDKIKCDVCQTSRYKQINNDSENRSTTEADNDGDYKATNVGAKVLRYFPLIPRLQRL
                     FMSPKMAGSMRWHEESRMKDGRLRHPADSPAWKTFDYENSEFSKEPRNVRLGLASYGF
                     NSFGNMSVSHSTWPVVLMPYNLPPWLCMKKPFLFLSLLTSGPSAPVVDTGVNTYDAST
                     KIYFTLRAFLLWMVSDFPVYANLSGWSTKGKLACPSCHKETRSTRLSNSHKEIFMAHR
                     CWLESLHPFRMDKDSFDGTEECEGPPRSLTGEQVLAELKGFEIKFGKLVKDNPSLPYN
                     WKKRNRKTKDHLKGHRDLEEMGIRHELHPEPLQMAKYAFRQLCSKVLNPNDLFNMEKD
                     IGKILCDLERIFPPSFFDVIIYLSVHLASEARLGGSVHYRWMYPIESYLGTLKSYVRN
                     KSKPEGSIVEGYLAEECLSFCSMYLASDVETIHNKTSRNHDDDGDDTRASEYS"
     misc_feature    364..945
                     /gene="LOC139841595"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1126..1464
                     /gene="LOC139841595"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
ORIGIN      
        1 atgagggaag ccttccctca tgctgccata ccgaagtcat tgtatgaatt aaggaagata
       61 ataagagatt taggtctagg ttatgagaaa attgatgctt gtccaaatga ttgtatgttg
      121 tactggaaag aaaacaagga caaaattaag tgtgacgtat gtcagacctc aagatataaa
      181 caaattaata atgattctga aaataggtca accacagaag ctgataatga tggtgattat
      241 aaagctacga atgttggagc aaaagtgttg cgttattttc cactcatacc acgcttgcaa
      301 agattgttta tgtcgcctaa aatggccggg tcgatgagat ggcatgaaga gagtcgtatg
      361 aaagatggta gattaagaca tcccgcagat tcaccagcct ggaaaacatt cgattatgag
      421 aatagtgaat tttctaaaga acctcgtaat gtgaggcttg gtttggcgag ttatgggttt
      481 aactcttttg gaaacatgag tgtttcacat agtacatggc ctgttgtttt gatgccatat
      541 aatctacctc catggttgtg catgaaaaaa ccttttctat tcctaagttt acttacatcc
      601 ggtccatctg ctccagttgt ggatactgga gttaatactt atgacgcatc aactaagatt
      661 tacttcacac tgcgtgcttt tttgttatgg atggtaagtg actttcctgt gtatgcgaat
      721 ttatcgggtt ggagcactaa aggtaaatta gcttgtcctt catgccataa ggaaaccaga
      781 tcaacacggt tatcaaactc ccacaaagaa atcttcatgg cacatcgctg ctggttggaa
      841 tcattgcatc ctttccgtat ggataaagat tcttttgatg gtacagaaga atgtgaagga
      901 ccaccgcgta gcttaacagg ggaacaagtg cttgcggagc tgaaaggctt tgaaataaaa
      961 tttggaaaac ttgtgaagga taacccatct ttaccatata attggaagaa gagaaataga
     1021 aagaccaagg atcatttaaa aggacatcgt gatttggaag aaatgggtat tagacatgaa
     1081 cttcatccag aacctttaca aatggcaaag tatgcattca gacaattatg ctcaaaagtt
     1141 cttaatccta atgatttatt taacatggaa aaagatattg gaaaaatact ttgtgattta
     1201 gaaaggattt ttccaccatc attttttgat gtcattattt atctatcagt tcatctagct
     1261 tcagaggcca gattaggggg atctgttcat taccgttgga tgtatccaat cgagagttat
     1321 ttaggtacat taaaatctta tgtgcgaaac aagagtaaac ccgagggttc aattgtagaa
     1381 ggatatttag cggaagagtg tttgtcattt tgttctatgt atttagccag tgatgtcgag
     1441 accatacata ataagactag ccgaaatcat gatgatgatg gtgatgatac tagagcatct
     1501 gaatattctt ag
//
LOCUS       XM_071831810             534 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841596), mRNA.
ACCESSION   XM_071831810
VERSION     XM_071831810.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..534
                     /gene="LOC139841596"
                     /note="uncharacterized LOC139841596; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841596"
     CDS             1..534
                     /gene="LOC139841596"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687911.1"
                     /db_xref="GeneID:139841596"
                     /translation="MNQNFEMIRARLKAAQDQKKSYADKHRQPIEFHEGDMVMLKVSS
                     WKGMIRFRKWVKHAPRLIRPFKVLAHVGEIANRLEFLEELVGIHNTFHFSYLRKCLAD
                     DSMWVPLDEITLNNKQEYVEEPVVILDEKVKEIQNKRIQTYKVQWHHRKGFKCTRELE
                     DGAFTLVICCVDRGDAI"
ORIGIN      
        1 atgaaccaaa attttgagat gattcgtgct cgcctcaaag cggcacaaga tcaaaaaaag
       61 tcgtatgcgg ataagcatag gcagccgatt gagtttcatg aaggtgatat ggtgatgctt
      121 aaggtgtcat catggaaggg catgattcgg ttccgaaagt gggtaaagca tgctcctcgg
      181 cttatcaggc catttaaagt gttggcacat gttggtgaaa ttgccaatcg attagaattt
      241 ctcgaagagc ttgtaggaat ccataacaca ttccattttt cctatcttcg caagtgtctt
      301 gcggatgact cgatgtgggt tccgttagat gagattactc taaataacaa acaagagtac
      361 gtggaagagc cggttgtgat tcttgatgaa aaggttaaag agattcagaa taagaggatt
      421 cagacctata aggtgcaatg gcatcaccga aagggtttca agtgtacacg ggaattagag
      481 gatggagcat ttaccctcgt tatatgctgc gtggatcgtg gggacgcgat ctaa
//
LOCUS       XM_071831811            1662 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841597), mRNA.
ACCESSION   XM_071831811
VERSION     XM_071831811.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1662
                     /gene="LOC139841597"
                     /note="uncharacterized LOC139841597; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841597"
     CDS             1..1662
                     /gene="LOC139841597"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687912.1"
                     /db_xref="GeneID:139841597"
                     /translation="MTSGAETNDNNTIPNITLSAEQFHILLTVAQGNHINGNNGQQNL
                     PKTCSYKDFSNCKPPSYKGTEGPVELIQWFEKLESIFRMCNCADVDRVKFATGSLFGG
                     ALTWWTTYSQTVGLDAANAIPWTVLKRMMTDKYCPRNQVQKMESEFLELKVKGTNIEA
                     YTNCFLELAILCPNMVPMEHKKIERYVEGLPDEIQGNVIAAGKETVDGVILMAQNLVM
                     VKRRKLATNKQTEVKVADNKRKFEPSQSSGQGSNKRVNDTTKSGYIGTKPLCNHCNKH
                     HHGLCTAKCGRCKRIGHSTENCRVTLSATITTPTVPTCFGCGKKGHYKNNCPKNKTAK
                     TDTAKGRAFVMTVEEARNDDDVITGTFLVNNCYASVLFDTGTDRSYVSIEFCTLFDEK
                     PQNLDTKCLVEMANGKFIKFDLIYKECNLILANKTFKVDLFPVKLGSFDVVLGMDWLS
                     PMKVGIQCFDKTINIPLETGEILVIQGDKSGSKLNLISCIQTRKYLMKGCQAILAHIK
                     EVNPDERRIEDVPVVKYFLEVFPDELPVDSDGIHVDPSKISAIQN"
     misc_feature    277..576
                     /gene="LOC139841597"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    604..>1002
                     /gene="LOC139841597"
                     /note="Arginine methyltransferase-interacting protein,
                     contains RING Zn-finger [Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; Region: AIR1; COG5082"
                     /db_xref="CDD:227414"
     misc_feature    1012..1389
                     /gene="LOC139841597"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1117..1119,1123..1125,1129..1131,1204..1212,
                     1327..1329)
                     /gene="LOC139841597"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1117..1125
                     /gene="LOC139841597"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1117..1119
                     /gene="LOC139841597"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1204..1215,1225..1236)
                     /gene="LOC139841597"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgactagtg gtgcagaaac aaacgacaac aacactattc ccaacatcac tctctctgcc
       61 gagcaatttc atatactttt aactgtcgcc cagggcaacc acatcaatgg caacaacggt
      121 caacagaatc ttcccaaaac ttgttcatac aaggatttct caaactgtaa acctccaagc
      181 tataaaggaa ctgagggacc ggttgaacta atccagtggt tcgaaaaact tgagtctatt
      241 tttaggatgt gcaattgtgc cgatgttgat cgcgttaagt ttgctacagg atctttattt
      301 ggcggtgcac tgacttggtg gaccacatat tctcaaactg taggacttga tgctgcaaat
      361 gccatcccat ggactgtcct aaaaagaatg atgacggaca agtactgtcc gagaaatcag
      421 gtccaaaaaa tggaaagtga gttcctggaa ctcaaggtga agggtactaa cattgaggct
      481 tataccaact gtttcttaga gttggctata ttgtgcccca acatggtacc tatggaacac
      541 aagaagattg aacgttatgt tgaaggtctg cctgatgaga ttcagggtaa tgtgatagct
      601 gctggaaagg agaccgtcga tggtgtgata ttgatggctc aaaatttggt aatggtgaaa
      661 agaaggaagc tcgctactaa taaacaaacc gaagtaaaag ttgctgataa taaaaggaag
      721 tttgaacctt ctcagagttc gggccagggt tcaaacaaaa gggttaatga tactacaaaa
      781 agtggttata ttggaacaaa gccgttatgt aatcattgta ataaacatca tcatgggttg
      841 tgcactgcta agtgcggaag gtgtaagagg attggtcact cgaccgagaa ttgtagagtt
      901 actctgtctg ctacaattac aactccaacc gtgcctactt gtttcggttg tgggaaaaag
      961 gggcattaca agaacaactg ccctaagaac aagactgcaa aaactgatac tgctaaggga
     1021 agagctttcg tcatgaccgt tgaagaagct aggaacgacg atgatgtcat tactggtacg
     1081 tttcttgtca acaactgcta tgcttctgtt ttattcgata ctggtactga tagaagctat
     1141 gtgtctattg aattctgtac cttatttgac gagaaacctc aaaacttaga cactaagtgt
     1201 cttgtagaaa tggccaatgg gaaatttata aaatttgacc tgatctacaa ggaatgtaat
     1261 ctgattctag ccaataaaac cttcaaggtt gacttatttc cagtaaaact aggaagcttt
     1321 gatgtagtct taggaatgga ttggttatcc ccaatgaaag tgggtatcca gtgttttgat
     1381 aagacaatta atattcctct cgaaactggt gaaattcttg ttatccaagg agacaagagt
     1441 ggttccaaac ttaaccttat ctcatgcatc caaacccgaa agtaccttat gaaaggatgt
     1501 caagccattt tggctcacat aaaggaagtc aatccagatg aacggcgtat tgaagacgtc
     1561 cctgttgtta aatacttcct tgaagttttt cctgatgaac tccctgttga cagtgatgga
     1621 atacatgtcg acccctcaaa gatctcggct attcagaact ag
//
LOCUS       XM_071831812             762 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841598), mRNA.
ACCESSION   XM_071831812
VERSION     XM_071831812.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..762
                     /gene="LOC139841598"
                     /note="uncharacterized LOC139841598; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841598"
     CDS             1..762
                     /gene="LOC139841598"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687913.1"
                     /db_xref="GeneID:139841598"
                     /translation="MMEEVVNTTIASMIKETMKEELHQKLPQVQEEEGNQRNIEGVRA
                     NREIAPLKPYGLKDFKLGNPPTYEGSLDPIVSSRWVTDIEACFRTTRCPDNLKTTFGT
                     SMFRGVAQRWWNDLLVVKGGDYLDKITWEEFKVEFFKNFRSEAEVERLLREEIRGRII
                     ISQIHSFTALFDAARDIEDELKKKGATTARKEGFAPKRKFEQSNSPKRRVKPGHYARD
                     CKAPVSKPLICHNCLNEGHKKAECPQLSESERKEE"
     misc_feature    304..>468
                     /gene="LOC139841598"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <631..>729
                     /gene="LOC139841598"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 atgatggaag aggtagttaa tacaaccata gcctcgatga ttaaggaaac aatgaaagaa
       61 gaacttcatc agaagttgcc acaagttcaa gaagaagagg gaaatcaaag gaatattgag
      121 ggtgttcggg ctaatcgtga aatagcccca ctaaaaccct atggtttgaa agactttaag
      181 ttaggtaatc cgcctacata tgagggaagt cttgatccaa ttgtgagtag tcgttgggtt
      241 accgatatag aagcatgttt tcgaacaacc cgatgtcccg acaatttgaa aactaccttc
      301 gggacgagta tgtttagagg ggtagctcag cgatggtgga atgatctttt ggtggttaag
      361 ggaggtgatt atcttgataa gataacttgg gaagaattca aagttgagtt ctttaagaac
      421 tttaggtcgg aggcggaggt agagcggttg ttaagagagg agatccgggg gaggatcatt
      481 atatcacaaa tccattcctt cactgctttg tttgatgcgg caagggatat tgaagacgaa
      541 ttgaagaaga agggggcaac taccgcgaga aaggagggtt ttgctcctaa aagaaaattt
      601 gagcaaagta attcccccaa aagaagggta aagcctggtc actatgcaag agattgcaag
      661 gctcctgttt cgaagcctct catatgccac aattgtctta atgaaggcca caaaaaggcc
      721 gagtgtcctc aattgtctga atctgaaaga aaagaagaat aa
//
LOCUS       XM_071831813            1536 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841599), mRNA.
ACCESSION   XM_071831813
VERSION     XM_071831813.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1536
                     /gene="LOC139841599"
                     /note="uncharacterized LOC139841599; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841599"
     CDS             1..1536
                     /gene="LOC139841599"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687914.1"
                     /db_xref="GeneID:139841599"
                     /translation="MMRGYIYNQTELNNVILYKISELYHNHQNLILNLEKDLGTLSKQ
                     LAIRETGTLPSNTLENPRGSLEIQAITTRSGKTTQDPVMPNQEENHEPLKETSNEEIV
                     SNTPSKTTAPPKHVKPLEPIPYPQQLRKAKQQKRLEDFANMFNKINVNIPLIDLLKEN
                     PHYRKCLKTLLSNKGKDVENSSRFIIKECKDIFQKFDIPEKLGDAGSITVPCSFNDSK
                     IYQALADMGAIINLMPYSLYKRLGLGELTPTRMSICLADSSFNYPMGIAENIPVKIDR
                     FTFLADFVVLEMKENDKIPIILGRPFLRTAAFEFQMQTKTYSLGIGDNRITLNNHLEL
                     DLTCPMIKYVETCIEEEFDEFLSMDIDEFLFEIKEENLNDEFAELMKDEMNELIEEEH
                     EPITDELRIKHSLEAPPKLELKELPSHLEYVFLKDNFEFPVIISSELSKNQKDQLLEV
                     LKKHKKAFAWKTSDILRIDPTFCTHKILLEENAKPVIQRQRRLNPNMEEVIKKEVLKL
                     LDA"
     misc_feature    640..912
                     /gene="LOC139841599"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(673..675,679..681,685..687,757..765,889..891)
                     /gene="LOC139841599"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    673..681
                     /gene="LOC139841599"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    673..675
                     /gene="LOC139841599"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(757..768,778..789)
                     /gene="LOC139841599"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgatgcgag gatatattta taatcagaca gaattaaata atgttatttt gtataaaatc
       61 tctgagctat atcataatca tcaaaatttg atacttaatt tggaaaaaga tttaggaacc
      121 ttatctaaac agttagctat tagggaaact ggaacgttac catctaatac attagaaaat
      181 ccaaggggaa gtttagaaat acaagctata actactagga gtggaaaaac aacacaagat
      241 cctgttatgc ccaatcaaga agaaaatcat gagccactta aggaaactag taacgaagaa
      301 attgttagta ataccccttc taaaacaact gcaccaccta aacatgttaa gcccttagaa
      361 cccattccat accctcaaca actaaggaaa gctaaacaac aaaaacgttt agaggatttc
      421 gcaaatatgt ttaataagat aaacgttaat atccctttga tagacttatt aaaagagaat
      481 ccacattaca ggaaatgttt gaaaacttta ttatctaaca aaggcaaaga cgttgaaaat
      541 tcttctaggt ttattattaa agaatgtaaa gatatttttc aaaaatttga tatacccgaa
      601 aagctaggag atgcaggaag tattactgtc ccatgctcat ttaatgattc taaaatatat
      661 caagcattgg cagatatggg tgctattata aatttaatgc catattcact atataaaaga
      721 ctaggtctag gagaattaac tcccactaga atgtctattt gcttggccga tagttctttt
      781 aattacccaa tgggaatagc cgaaaacata cccgtaaaaa ttgatagatt cacttttctc
      841 gccgatttcg ttgttttaga aatgaaagaa aatgataaaa ttccaataat attaggtaga
      901 ccatttctaa gaactgccgc tttcgaattt caaatgcaaa ctaaaacata tagtttggga
      961 ataggagaca atagaattac tttgaataat catcttgaac tagatcttac ttgtccgatg
     1021 ataaaatatg tagaaacatg tattgaagaa gaatttgatg aatttttatc aatggatata
     1081 gatgaatttt tgtttgaaat aaaagaagaa aatcttaatg atgaattcgc agaattaatg
     1141 aaagatgaaa tgaatgaatt aatagaagag gagcatgaac caataactga tgaattaaga
     1201 ataaaacact ctcttgaagc accaccaaaa ctagaactta aagaattacc ctctcattta
     1261 gaatatgttt tcctaaaaga taacttcgaa tttcccgtca tcatttcctc cgaattatct
     1321 aaaaatcaaa aagatcaact cttagaagtt ctaaaaaaac ataaaaaggc tttcgcttgg
     1381 aaaacttctg atattctgag aattgatccc accttctgta ctcataagat tctattagaa
     1441 gaaaacgcaa aacccgtaat ccaaagacaa agacgcctaa accctaatat ggaagaagtc
     1501 ataaaaaagg aagttttaaa attattagac gcatga
//
LOCUS       XR_011757409            1489 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841600), transcript variant X1, ncRNA.
ACCESSION   XR_011757409
VERSION     XR_011757409.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1489
                     /gene="LOC139841600"
                     /note="uncharacterized LOC139841600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841600"
     ncRNA           1..1489
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841600"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139841600"
ORIGIN      
        1 aaccccccct aattttctcc ccaaaaacgc acgtctaaaa tcgaaatcaa ctgtaaaggt
       61 ttcgtccaaa tttcgatccg ttcgaaggtt tagatgaaga ttatcggttt ccgatgtaga
      121 gaggtatata actagttaca caaacagaag gttggaatta gggtttttca agtcgaaagc
      181 acattagcgg atatacaagc ataacttttt gatggtcacg ggaagatatc gttattatgg
      241 ctagcctcaa atttgttgca tatcggttct ccacctcacg gactcgaatg ttttcaaagg
      301 ggaccgatag tgtgaacaaa aaagaagttg cttattataa ccgcttaatc aactatcaac
      361 tatatgctta ataaagggaa gattgttcta attattcgga cttttgtttc aacgcatttg
      421 aagacggagt ttaaaactgg atgacattta acgagattaa agtggtgact tagcttgctc
      481 atattactaa tcttgtaata ctaggaagcg aagagccaga ggtatttgta ttggagcttt
      541 gggaggaact gatgttgtat aaaatatatc cgttagtaac cgcaccatat gaaaaacgct
      601 aactaaaaat ggataaaagc tttgcagata ttcgaccctg gattctattc ttcgaaagtg
      661 atccatccta ttgcacttgg aaaagtgatg acgatgaaaa aggaataata agatggagac
      721 tattcttttt ctggaattgg aggtgttgaa atgggtggta taactgctac tgaattcatt
      781 cttcttggcg caaataccgt tcaggtaatg aagtttcaac caatactttc tcacctgcac
      841 gattagcata aaacatacta atatttttat ccatcatatt ttatgtcaca tatgaaaaat
      901 ataatagcca tttatcccta aaactaatga atgcgggtta ttttatgagt tacaattaat
      961 cacaaaagta aagaattggg tcatcatatt ggttatagtc tttcttaaac aaaaagtgtt
     1021 gtcgtgtcag cgtagcatca tgtacgccca ttttgtacga agttgcatca ttttatttgt
     1081 aaaacaattg tgtaaactaa tgaatgcggg ttattttatg agtatattgt gggtatgttc
     1141 caaatccaac atcttgaatg tcgttggaat gcattgcaag aatattttta actatgaatg
     1201 gccattgggt tgggaattga agatcttaag tattcatgta gatagattag aagaatgtga
     1261 ggaatggatg ctacatttga acaaaatgta cattgacaat agtattgcta attgttgtgc
     1321 ttagaactta ttactatatg gatttaattg aatggatcat taagtgcaaa tttgcttatc
     1381 aaatattacg taaaataaaa taaagaagtc tcactacaat acctcaacta taacggaatt
     1441 gataacaaaa tgtcacaaca atagaacaaa atgtcataat ttaggagat
//
LOCUS       XR_011757410            1110 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841600), transcript variant X2, ncRNA.
ACCESSION   XR_011757410
VERSION     XR_011757410.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139841600"
                     /note="uncharacterized LOC139841600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841600"
     ncRNA           1..1110
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841600"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139841600"
ORIGIN      
        1 aaccccccct aattttctcc ccaaaaacgc acgtctaaaa tcgaaatcaa ctgtaaaggt
       61 ttcgtccaaa tttcgatccg ttcgaaggtt tagatgaaga ttatcggttt ccgatgtaga
      121 gaggtatata actagttaca caaacagaag gttggaatta gggtttttca agtcgaaagc
      181 acattagcgg atatacaagc ataacttttt gatggtcacg ggaagatatc gttattatgg
      241 ctagcctcaa atttgttgca tatcggttct ccacctcacg gactcgaatg ttttcaaagg
      301 ggaccgatag tgtgaacaaa aaagaagttg cttattataa ccgcttaatc aactatcaac
      361 tatatgctta ataaagggaa gattgttcta attattcgga cttttgtttc aacgcatttg
      421 aagacggagt ttaaaactgg atgacattta acgagattaa agtggtgact tagcttgctc
      481 atattactaa tcttgtaata ctaggaagcg aagagccaga ggtatttgta ttggagcttt
      541 gggaggaact gatgttgtat aaaatatatc cgttagtaac cgcaccatat gaaaaacgct
      601 aactaaaaat ggataaaagc tttgcagata ttcgaccctg gattctattc ttcgaaagtg
      661 atccatccta ttgcacttgg aaaagtgatg acgatgaaaa aggaataata agatggagac
      721 tattcttttt ctggaattgg aggtgttgaa atgggtggta taactgctac tgaattcatt
      781 cttcttggcg caaataccgt tcaggttttg gatgttagtg ttgttgattt attgatttct
      841 acacgtttaa ctgagattaa agtggaaagg ggatgctata aggttgataa agcaaggaag
      901 gttgtatttt aatattggaa gattggataa tgaagggaaa aaattaaggt tgatgatatt
      961 gtagatgaga aaatttaagt tattgtcttc tggaagatag gtgtaatttt attagtcttt
     1021 tggtgcatta gattgattga taatatattg atggagttgc atttcagcat atggtgcaat
     1081 gctttgggag gaattatcaa tttaaattca
//
LOCUS       XR_011757411            1571 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841600), transcript variant X3, ncRNA.
ACCESSION   XR_011757411
VERSION     XR_011757411.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1571
                     /gene="LOC139841600"
                     /note="uncharacterized LOC139841600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841600"
     ncRNA           1..1571
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841600"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139841600"
ORIGIN      
        1 aaccccccct aattttctcc ccaaaaacgc acgtctaaaa tcgaaatcaa ctgtaaaggt
       61 ttcgtccaaa tttcgatccg ttcgaaggtt tagatgaaga ttatcggttt ccgatgtaga
      121 gaggtatata actagttaca caaacagaag gttggaatta gggtttttca agtcgaaagc
      181 acattagcgg atatacaagc ataacttttt gatggtcacg ggaagatatc gttattatgg
      241 ctagcctcaa atttgttgca tatcggttct ccacctcacg gactcgaatg ttttcaaagg
      301 ggaccgatag tgtgaacaaa aaagaagttg cttattataa ccgcttaatc aactatcaac
      361 tatatgctta ataaagaagc agcaataaag cagacaagtt atgacaaata tggaagtata
      421 tgtaggaaat gatgttgtta tgtatatgtc acaatcaggg aagattgttc taattattcg
      481 gacttttgtt tcaacgcatt tgaagacgga gtttaaaact ggatgacatt taacgagatt
      541 aaagtggtga cttagcttgc tcatattact aatcttgtaa tactaggaag cgaagagcca
      601 gaggtatttg tattggagct ttgggaggaa ctgatgttgt ataaaatata tccgttagta
      661 accgcaccat atgaaaaacg ctaactaaaa atggataaaa gctttgcaga tattcgaccc
      721 tggattctat tcttcgaaag tgatccatcc tattgcactt ggaaaagtga tgacgatgaa
      781 aaaggaataa taagatggag actattcttt ttctggaatt ggaggtgttg aaatgggtgg
      841 tataactgct actgaattca ttcttcttgg cgcaaatacc gttcaggtaa tgaagtttca
      901 accaatactt tctcacctgc acgattagca taaaacatac taatattttt atccatcata
      961 ttttatgtca catatgaaaa atataatagc catttatccc taaaactaat gaatgcgggt
     1021 tattttatga gttacaatta atcacaaaag taaagaattg ggtcatcata ttggttatag
     1081 tctttcttaa acaaaaagtg ttgtcgtgtc agcgtagcat catgtacgcc cattttgtac
     1141 gaagttgcat cattttattt gtaaaacaat tgtgtaaact aatgaatgcg ggttatttta
     1201 tgagtatatt gtgggtatgt tccaaatcca acatcttgaa tgtcgttgga atgcattgca
     1261 agaatatttt taactatgaa tggccattgg gttgggaatt gaagatctta agtattcatg
     1321 tagatagatt agaagaatgt gaggaatgga tgctacattt gaacaaaatg tacattgaca
     1381 atagtattgc taattgttgt gcttagaact tattactata tggatttaat tgaatggatc
     1441 attaagtgca aatttgctta tcaaatatta cgtaaaataa aataaagaag tctcactaca
     1501 atacctcaac tataacggaa ttgataacaa aatgtcacaa caatagaaca aaatgtcata
     1561 atttaggaga t
//
LOCUS       XR_011757412            1565 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841600), transcript variant X4, ncRNA.
ACCESSION   XR_011757412
VERSION     XR_011757412.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1565
                     /gene="LOC139841600"
                     /note="uncharacterized LOC139841600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841600"
     ncRNA           1..1565
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841600"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139841600"
ORIGIN      
        1 aaccccccct aattttctcc ccaaaaacgc acgtctaaaa tcgaaatcaa ctgtaaaggt
       61 ttcgtccaaa tttcgatccg ttcgaaggtt tagatgaaga ttatcggttt ccgatgtaga
      121 gaggtatata actagttaca caaacagaag gttggaatta gggtttttca agtcgaaagc
      181 acattagcgg atatacaagc ataacttttt gatggtcacg ggaagatatc gttattatgg
      241 ctagcctcaa atttgttgca tatcggttct ccacctcacg gactcgaatg ttttcaaagg
      301 ggaccgatag tgtgaacaaa aaagaagttg cttattataa ccgcttaatc aactatcaac
      361 tatatgctta ataaagcaat aaagcagaca agttatgaca aatatggaag tatatgtagg
      421 aaatgatgtt gttatgtata tgtcacaatc agggaagatt gttctaatta ttcggacttt
      481 tgtttcaacg catttgaaga cggagtttaa aactggatga catttaacga gattaaagtg
      541 gtgacttagc ttgctcatat tactaatctt gtaatactag gaagcgaaga gccagaggta
      601 tttgtattgg agctttggga ggaactgatg ttgtataaaa tatatccgtt agtaaccgca
      661 ccatatgaaa aacgctaact aaaaatggat aaaagctttg cagatattcg accctggatt
      721 ctattcttcg aaagtgatcc atcctattgc acttggaaaa gtgatgacga tgaaaaagga
      781 ataataagat ggagactatt ctttttctgg aattggaggt gttgaaatgg gtggtataac
      841 tgctactgaa ttcattcttc ttggcgcaaa taccgttcag gtaatgaagt ttcaaccaat
      901 actttctcac ctgcacgatt agcataaaac atactaatat ttttatccat catattttat
      961 gtcacatatg aaaaatataa tagccattta tccctaaaac taatgaatgc gggttatttt
     1021 atgagttaca attaatcaca aaagtaaaga attgggtcat catattggtt atagtctttc
     1081 ttaaacaaaa agtgttgtcg tgtcagcgta gcatcatgta cgcccatttt gtacgaagtt
     1141 gcatcatttt atttgtaaaa caattgtgta aactaatgaa tgcgggttat tttatgagta
     1201 tattgtgggt atgttccaaa tccaacatct tgaatgtcgt tggaatgcat tgcaagaata
     1261 tttttaacta tgaatggcca ttgggttggg aattgaagat cttaagtatt catgtagata
     1321 gattagaaga atgtgaggaa tggatgctac atttgaacaa aatgtacatt gacaatagta
     1381 ttgctaattg ttgtgcttag aacttattac tatatggatt taattgaatg gatcattaag
     1441 tgcaaatttg cttatcaaat attacgtaaa ataaaataaa gaagtctcac tacaatacct
     1501 caactataac ggaattgata acaaaatgtc acaacaatag aacaaaatgt cataatttag
     1561 gagat
//
LOCUS       XR_011757413            1522 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841600), transcript variant X5, ncRNA.
ACCESSION   XR_011757413
VERSION     XR_011757413.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1522
                     /gene="LOC139841600"
                     /note="uncharacterized LOC139841600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841600"
     ncRNA           1..1522
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841600"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139841600"
ORIGIN      
        1 aaccccccct aattttctcc ccaaaaacgc acgtctaaaa tcgaaatcaa ctgtaaaggt
       61 ttcgtccaaa tttcgatccg ttcgaaggtt tagatgaaga ttatcggttt ccgatgtaga
      121 gaggtatata actagttaca caaacagaag gttggaatta gggtttttca agtcgaaagc
      181 acattagcgg atatacaagc ataacttttt gatggtcacg ggaagatatc gttattatgg
      241 ctagcctcaa atttgttgca tatcggttct ccacctcacg gactcgaatg ttttcaaagg
      301 ggaccgatag tgtgaacaaa aaagaagttg cttattataa ccgcttaatc aactatcaac
      361 tatatgctta ataaaggaaa tgatgttgtt atgtatatgt cacaatcagg gaagattgtt
      421 ctaattattc ggacttttgt ttcaacgcat ttgaagacgg agtttaaaac tggatgacat
      481 ttaacgagat taaagtggtg acttagcttg ctcatattac taatcttgta atactaggaa
      541 gcgaagagcc agaggtattt gtattggagc tttgggagga actgatgttg tataaaatat
      601 atccgttagt aaccgcacca tatgaaaaac gctaactaaa aatggataaa agctttgcag
      661 atattcgacc ctggattcta ttcttcgaaa gtgatccatc ctattgcact tggaaaagtg
      721 atgacgatga aaaaggaata ataagatgga gactattctt tttctggaat tggaggtgtt
      781 gaaatgggtg gtataactgc tactgaattc attcttcttg gcgcaaatac cgttcaggta
      841 atgaagtttc aaccaatact ttctcacctg cacgattagc ataaaacata ctaatatttt
      901 tatccatcat attttatgtc acatatgaaa aatataatag ccatttatcc ctaaaactaa
      961 tgaatgcggg ttattttatg agttacaatt aatcacaaaa gtaaagaatt gggtcatcat
     1021 attggttata gtctttctta aacaaaaagt gttgtcgtgt cagcgtagca tcatgtacgc
     1081 ccattttgta cgaagttgca tcattttatt tgtaaaacaa ttgtgtaaac taatgaatgc
     1141 gggttatttt atgagtatat tgtgggtatg ttccaaatcc aacatcttga atgtcgttgg
     1201 aatgcattgc aagaatattt ttaactatga atggccattg ggttgggaat tgaagatctt
     1261 aagtattcat gtagatagat tagaagaatg tgaggaatgg atgctacatt tgaacaaaat
     1321 gtacattgac aatagtattg ctaattgttg tgcttagaac ttattactat atggatttaa
     1381 ttgaatggat cattaagtgc aaatttgctt atcaaatatt acgtaaaata aaataaagaa
     1441 gtctcactac aatacctcaa ctataacgga attgataaca aaatgtcaca acaatagaac
     1501 aaaatgtcat aatttaggag at
//
LOCUS       XR_011757414            1442 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841600), transcript variant X6, ncRNA.
ACCESSION   XR_011757414
VERSION     XR_011757414.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1442
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1442
                     /gene="LOC139841600"
                     /note="uncharacterized LOC139841600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841600"
     ncRNA           1..1442
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841600"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139841600"
ORIGIN      
        1 aaccccccct aattttctcc ccaaaaacgc acgtctaaaa tcgaaatcaa ctgtaaaggt
       61 ttcgtccaaa tttcgatccg ttcgaaggtt tagatgaaga ttatcggttt ccgatgtaga
      121 gaggtatata actagttaca caaacagaag gttggaatta gggtttttca agtcgaaagc
      181 acattagcgg atatacaagc ataacttttt gatggtcacg ggaagatatc gttattatgg
      241 ctagcctcaa atttgttgca tatcggttct ccacctcacg gactcgaatg ttttcaaagg
      301 ggaccgatag tgtgaacaaa aaagaagttg cttattataa ccgcttaatc aactatcaac
      361 tatatgctta ataaagacgg agtttaaaac tggatgacat ttaacgagat taaagtggtg
      421 acttagcttg ctcatattac taatcttgta atactaggaa gcgaagagcc agaggtattt
      481 gtattggagc tttgggagga actgatgttg tataaaatat atccgttagt aaccgcacca
      541 tatgaaaaac gctaactaaa aatggataaa agctttgcag atattcgacc ctggattcta
      601 ttcttcgaaa gtgatccatc ctattgcact tggaaaagtg atgacgatga aaaaggaata
      661 ataagatgga gactattctt tttctggaat tggaggtgtt gaaatgggtg gtataactgc
      721 tactgaattc attcttcttg gcgcaaatac cgttcaggta atgaagtttc aaccaatact
      781 ttctcacctg cacgattagc ataaaacata ctaatatttt tatccatcat attttatgtc
      841 acatatgaaa aatataatag ccatttatcc ctaaaactaa tgaatgcggg ttattttatg
      901 agttacaatt aatcacaaaa gtaaagaatt gggtcatcat attggttata gtctttctta
      961 aacaaaaagt gttgtcgtgt cagcgtagca tcatgtacgc ccattttgta cgaagttgca
     1021 tcattttatt tgtaaaacaa ttgtgtaaac taatgaatgc gggttatttt atgagtatat
     1081 tgtgggtatg ttccaaatcc aacatcttga atgtcgttgg aatgcattgc aagaatattt
     1141 ttaactatga atggccattg ggttgggaat tgaagatctt aagtattcat gtagatagat
     1201 tagaagaatg tgaggaatgg atgctacatt tgaacaaaat gtacattgac aatagtattg
     1261 ctaattgttg tgcttagaac ttattactat atggatttaa ttgaatggat cattaagtgc
     1321 aaatttgctt atcaaatatt acgtaaaata aaataaagaa gtctcactac aatacctcaa
     1381 ctataacgga attgataaca aaatgtcaca acaatagaac aaaatgtcat aatttaggag
     1441 at
//
LOCUS       XM_071831814             764 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841602), mRNA.
ACCESSION   XM_071831814
VERSION     XM_071831814.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..764
                     /gene="LOC139841602"
                     /note="uncharacterized LOC139841602; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841602"
     CDS             111..764
                     /gene="LOC139841602"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687915.1"
                     /db_xref="GeneID:139841602"
                     /translation="MEGVGARLGRSSTRYGPAVVFTGPVRKWKKKWIHVTPPNASAAT
                     TGAGSNHQSNVISNGNSSSNGSNDNGSHILLYKWTPLQSQSQNGGGDSNGDGDVNAAD
                     EEEQPPRRKIKYIPIALLEEQKKESEDDHIDEAIDTDSNSKDDGVNGKPDINGVPMEE
                     NEVSEERNVARQDLNENTLDLNARDGDEDPEETKDQTRYRRYDMVPKDCICWDLTSL"
ORIGIN      
        1 aaaaaccaca aagatataaa aaaaaaacca accttcaccg gaacttttct tttccgattc
       61 cgatctgatc gccacctagt gattacctgt tctattcaat tgattaacaa atggaaggag
      121 tcggtgcgcg cctgggccga tcgtcaactc ggtacggacc agcggtcgtg tttacaggtc
      181 cggtaaggaa atggaaaaag aagtggatcc acgtgacgcc gccgaacgcc tccgccgcaa
      241 ccaccggtgc cggaagtaat catcaatcta atgtcattag taacggtaat tcttcttcta
      301 acggtagtaa tgataacgga tctcatattt tattgtataa atggactcct cttcaaagtc
      361 aaagtcaaaa cggcggtgga gatagtaatg gcgatggtga tgttaacgcc gctgatgagg
      421 aagagcaacc gcctcgcaga aaaattaagt atattccgat agcgttactc gaagaacaaa
      481 aaaaggagtc ggaggacgat catattgatg aagcgattga tactgattca aattcgaagg
      541 atgatggtgt taacggaaaa ccagatatta atggcgtgcc catggaagaa aatgaggttt
      601 ctgaagagag aaatgttgca aggcaggatc taaatgaaaa cactttggat ctgaatgctc
      661 gtgatggaga tgaagatcct gaagaaacaa aagatcaaac acggtatagg cgttatgaca
      721 tggtacctaa agattgtatc tgttgggatt taacaagttt ataa
//
LOCUS       XM_071831816             897 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841603), mRNA.
ACCESSION   XM_071831816
VERSION     XM_071831816.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..897
                     /gene="LOC139841603"
                     /note="uncharacterized LOC139841603; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841603"
     CDS             1..897
                     /gene="LOC139841603"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687917.1"
                     /db_xref="GeneID:139841603"
                     /translation="MESQPNLTSGVTAMTATMTSATVVTPMVVVPLLNTVATHAEKPE
                     NWQQKMLFYLTTLNLARFLTETAPRVEGEQDAQTVSAVQAWNHSDFLCRNYVLNGMVD
                     SLYNVYCKTKTAKELWESLERKYKTEDAGTKKWVVAKFLEFMMIDSKTVMSQVQELQV
                     IIHDIHAEGMVISEGFQVAAIIEKLPPSWMDFKNYKHKRKEMTVEDLVVRLRIEEDKK
                     VAIKRSYAPSSAKVNIVEHGQSSRGNKGKGKAEKKNKGKGSKLGPKGGVVKKKFHGMC
                     YNCDQPGHRASECKKPKKENSH"
     misc_feature    277..654
                     /gene="LOC139841603"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    826..873
                     /gene="LOC139841603"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
ORIGIN      
        1 atggaatctc agccaaacct tacttctggt gttactgcta tgactgcaac gatgacatct
       61 gctactgttg ttacccctat ggtggttgta ccgcttctga acacggttgc aactcatgct
      121 gaaaaacccg agaattggca acaaaagatg ttgttttact tgacaacgct gaaccttgcg
      181 aggttcttga ctgaaaccgc tccccgagtt gaaggggaac aagatgctca aactgtgagc
      241 gcggttcagg cttggaatca ctctgatttc ttgtgccgca actatgtttt gaatggcatg
      301 gttgattcgc tctataatgt gtactgcaaa acaaagactg ccaaagaatt atgggagtct
      361 ttagaacgga agtacaaaac tgaggatgcg ggtaccaaga aatgggtggt ggctaaattc
      421 ttggagttca tgatgattga ctcaaagact gttatgagtc aagtccaaga actgcaagtc
      481 attattcacg atatacatgc cgaaggtatg gtgattagtg agggattcca agttgcggcg
      541 ataatcgaga aattaccacc aagttggatg gatttcaaga attataagca taagcgaaag
      601 gaaatgaccg ttgaggacct tgtggtccgt cttcgaattg aggaagacaa aaaagttgct
      661 attaaaagga gctatgcccc tagttcagca aaagtgaata ttgttgaaca cggtcaatcc
      721 tcaagaggta acaaaggcaa aggaaaggct gagaaaaaga acaaggggaa agggtctaag
      781 cttggaccta aaggtggtgt cgtgaagaag aaatttcatg gcatgtgcta taactgtgac
      841 caaccgggtc atcgggcgag tgaatgcaag aagcccaaga aagagaactc gcactaa
//
LOCUS       XM_071831817             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841604), mRNA.
ACCESSION   XM_071831817
VERSION     XM_071831817.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139841604"
                     /note="uncharacterized LOC139841604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841604"
     CDS             1..795
                     /gene="LOC139841604"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687918.1"
                     /db_xref="GeneID:139841604"
                     /translation="MTSYLLASDSDSEDIRVIQLIQELDEESEVESVPRIPRVRGYIS
                     RDHESAAQRLWNHYFADAPVFPAKKFKRRENIDAIGRQSFTTLQKCTSSIRQLAYGLS
                     PDALDEYLHMSEQTLVICLDNFCKCIIDLYKIRYMRSPTATDVARLYSAQEEKHGFKG
                     MLGSIDCMHWEWKNCPVALKGQYTRGDYKKPTIMLEAVASYDLWIWHAFSGMTGSNND
                     INVLNQSPVFDALKNETAPSTPFEVNGHQYTKVITFPLVYIPIERH"
     misc_feature    403..>744
                     /gene="LOC139841604"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgacatcat atttattagc ttccgattcc gattcagagg atattcgtgt tatccaactt
       61 attcaagaat tggacgaaga gtccgaagtc gagtccgttc cccgtattcc cagagttcgc
      121 ggatacattt cgagagatca tgagtcagca gcgcaacgat tgtggaacca ttactttgcc
      181 gacgcaccag tttttccagc taagaaattt aaaaggcgag aaaatattga tgctattggt
      241 aggcagtcgt ttactacttt acaaaagtgt acttcgtcta tacgtcagtt ggcttatgga
      301 ttgagccctg atgctctcga tgaatattta catatgagtg agcaaacatt agtaatatgt
      361 ttagacaact tttgtaaatg tattattgat ttatataaaa ttcgatacat gagatctccc
      421 acagcaaccg atgttgcacg attatatagt gcacaagagg agaagcatgg attcaagggt
      481 atgctcggta gtatcgattg catgcattgg gaatggaaga attgccctgt tgctttgaaa
      541 ggacaataca ctaggggtga ttacaagaaa cctacgatta tgcttgaagc ggtggcttca
      601 tatgacttgt ggatttggca tgctttttcc gggatgacag gttccaacaa tgatatcaat
      661 gttttgaatc agtcaccggt ttttgatgca ctaaagaacg aaactgctcc atctacacca
      721 tttgaggtaa atggccatca atacaccaag gttattacct ttccgttggt atatatcccg
      781 attgagcgac actga
//
LOCUS       XM_071831818            1032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841605), mRNA.
ACCESSION   XM_071831818
VERSION     XM_071831818.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1032
                     /gene="LOC139841605"
                     /note="uncharacterized LOC139841605; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841605"
     CDS             1..1032
                     /gene="LOC139841605"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687919.1"
                     /db_xref="GeneID:139841605"
                     /translation="MGFNIRWITWIKACLVSSKASILLNGSPSSKFSIGRGLRQGDPL
                     SPFLFIIGMEGLQAAIHDATNAALYHPLHIGPDSNYFPISICIEHFSHLILLLRGVGF
                     KDKYPKIFVAWSGVHNSEVSNLASSLGCMASSLPFYHLGLPVGMNMKRVESWTPIIDK
                     EKKTSFFLESNHDFHGGKGGNQKVKKIHWVNWRLILNPLSKGGLRVTSLSFLNLALLY
                     KWRWRFITNLNASWVKAVKCIHNQRGNSSSLSANSPGIWFDIVKNIDLLHNSSLDPSL
                     LRVRIGNGECSKYWFDPWLDGSILANRFPRLFALDINKDSTIAAQVSITGGIGFGEDV
                     LEVGLKVNN"
     misc_feature    <109..>180
                     /gene="LOC139841605"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    121..123
                     /gene="LOC139841605"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgggattca atatccgctg gattacctgg attaaggctt gtcttgtttc ttcgaaagct
       61 tcgatattac ttaacggcag tccttcttca aagtttagca ttggcagagg tcttcggcaa
      121 ggtgatcctc tatctccatt cctttttatc atcgggatgg aaggtcttca agcggccatc
      181 catgatgcta ccaatgcggc actttatcat ccgcttcaca ttggtcctga ttccaactac
      241 ttcccgattt ctatttgcat cgaacatttt tctcatctta tcctgcttct tcgcggtgtc
      301 gggtttaaag ataaatatcc aaaaatcttc gttgcatgga gtggggtcca taactctgag
      361 gtttctaatc ttgcttcatc tttagggtgc atggcttcat ctcttccttt ctatcatcta
      421 gggctgccag tcggcatgaa catgaaacgg gtggaaagtt ggactcctat aatcgataag
      481 gaaaaaaaaa cgtctttctt cttggaaagc aaccatgatt tccatggggg gaagggaggg
      541 aatcaaaagg taaaaaagat tcattgggtt aattggcgcc ttatccttaa tcccctttcg
      601 aaaggtggtc ttagagtcac gagcctttcc ttcttaaatc ttgcgttact ttacaaatgg
      661 aggtggagat ttattacaaa cttaaatgcc tcatgggtca aggccgtcaa atgcattcat
      721 aatcaaaggg gcaattctag ttcattatct gctaattctc ctggtatttg gtttgatatt
      781 gttaaaaaca ttgatttgct gcacaattcc tctttagatc cttctttgtt acgggtccga
      841 atagggaatg gagaatgctc aaaatattgg tttgatccat ggttggatgg ctctatttta
      901 gctaatcgtt tccccagatt atttgcgctt gacatcaaca aggattctac gattgctgct
      961 caagtttcga ttacgggtgg aattggtttt ggagaagatg tcctagaggt gggattgaaa
     1021 gtgaacaact aa
//
LOCUS       XM_071831819             384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841606), mRNA.
ACCESSION   XM_071831819
VERSION     XM_071831819.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..384
                     /gene="LOC139841606"
                     /note="uncharacterized LOC139841606; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841606"
     CDS             1..384
                     /gene="LOC139841606"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687920.1"
                     /db_xref="GeneID:139841606"
                     /translation="MATLPLTSGPSTLLVLLLRAQVNGQCEVTNRDIVKGIKACLGLY
                     GNEWVDELPSVLWAHRIIHKNSIGETPLSLVYGTEAVIPAELMVPTKCIRSFDELSND
                     EGLRGNLDMLEERREIASIREAIKS"
ORIGIN      
        1 atggcaacgt tgcctttaac aagtgggcca tcaacattgt tggttctatt actgcgtgct
       61 caggtcaatg gccaatgtga agtaactaat cgggatattg taaaggggat aaaggcatgc
      121 ctgggtttgt atggtaatga gtgggtcgat gagctcccaa gtgttttatg ggcgcatcgt
      181 atcattcata aaaatagcat aggagaaaca ccattgagtt tggtctatgg aactgaagca
      241 gtgatccccg cggaattaat ggtcccaaca aagtgcatac gtagctttga tgagttgagc
      301 aacgatgagg gcttgcgcgg taatctggat atgctagaag agcgcagaga aatagcctcc
      361 atacgggaag caattaaaag ttag
//
LOCUS       XM_071831820            1721 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841608), mRNA.
ACCESSION   XM_071831820
VERSION     XM_071831820.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1721
                     /gene="LOC139841608"
                     /note="uncharacterized LOC139841608; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841608"
     CDS             114..1454
                     /gene="LOC139841608"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687921.1"
                     /db_xref="GeneID:139841608"
                     /translation="MSTQSPAEPPSRAVGGTEYSWCRAVPDGTGVTVLSLLFSKQPNL
                     PHLQSCIHTLQNSHPILRSKLRFNPSTSTFSFFTPSTSSNLQITSSDSNFTFYQTLEH
                     EINTNPWKHNESETGTDVMFASVYNLQEGKYAVVLRLHTAACDRTSAAFLLRELLKLI
                     GDDDNVDLFKEDGLGLAIEDCVPAGKANKPFWARGADMFGYSVNSFRFSNLEFKESGF
                     PKSTEFVRLKIGLEDTEKILSGCKSRGIKLFGLLAAAGFIAAHASKNIPDEKWEKYSL
                     ATLVDCRSLLDPVLSDHHVGFYHSAILNSHDVKGGEDIWDLAQRIFSSLETAKNNNKH
                     FTDMADLNFLMCKAIDNPSLTPSSSLRTSLISVFEESLIENTNQLHKDLGLLDCIGCA
                     SVHGVSPSLAIFDTINDGQLDCACVYPSPTHSREQMQDFVDHMKKVLIGATVSK"
ORIGIN      
        1 acctttttat acgatagtca aaatcgcatc atcattttcc ttcatctatt catttttaat
       61 tcccagttaa ttaaaaacct aaataaaaat ctttcatttt tttcacaaac aaaatgtcta
      121 cacaatctcc ggccgaacct ccgtcacgtg ccgtcggcgg caccgaatac agctggtgcc
      181 gcgccgttcc cgacggcacc ggcgtcaccg tattatctct acttttctcc aaacaaccaa
      241 atctccctca ccttcaatca tgcatccaca ccttacaaaa ctcccatcct attcttcgat
      301 caaagctcag attcaacccc tcaacttcca ctttttcctt ttttaccccc tcaacttcct
      361 ccaacctcca aatcacctcc tccgattcca atttcacatt ctaccaaacc ctagaacacg
      421 aaatcaatac caacccgtgg aaacacaatg aatcggaaac tggaactgat gttatgtttg
      481 cgagtgtgta taatttgcag gaggggaaat atgcggtggt gttacggttg catacggcgg
      541 cttgtgaccg tacatcagct gcatttttgt tgagagagtt gttgaagttg attggtgatg
      601 atgacaatgt ggatttgttt aaagaagatg gattagggtt agctattgaa gattgtgtgc
      661 ctgctgggaa agctaataaa ccgttttggg cacgtggtgc tgatatgttt gggtactctg
      721 ttaattcgtt tcggttttcg aatttggagt ttaaggaaag cgggtttccg aaatcgaccg
      781 aatttgttag gttgaaaatt ggattagaag atacagaaaa gattctatct ggctgcaaat
      841 cgagaggtat taagctattt gggctgttag cagcagctgg atttatagcg gctcatgctt
      901 ctaaaaacat tccagacgag aaatgggaaa agtattcact tgcaactctt gttgactgtc
      961 gttcacttct tgatccagtt cttagtgatc atcatgttgg attttaccat tccgctatct
     1021 taaattctca tgacgtaaag ggaggagaag atatatggga cctagcacaa agaatatttt
     1081 catctttaga aactgcaaag aacaacaata aacatttcac agacatggct gacctaaact
     1141 ttctcatgtg caaagccatc gataacccta gtttgactcc atcttcatca ctaagaactt
     1201 cacttatttc agtattcgaa gaatccttaa ttgaaaacac caatcaattg cacaaagacc
     1261 ttggtttatt agattgcatt gggtgtgctt ctgttcatgg cgtgagccct tcactcgcaa
     1321 tttttgacac aattaatgat ggtcaacttg attgtgcttg tgtgtatcca tctccaaccc
     1381 attcaaggga acaaatgcaa gattttgtgg atcatatgaa gaaagttctt attggggcta
     1441 ctgtttctaa atgaatgtac ttgtaatttt gactttcatt tgttgttagg gattcgggtt
     1501 ttagctgata aatgttcttg gatgtaattt tgtggctagc tcgttaaaaa tcttctgcaa
     1561 gtgatatgtc agtgaataaa tttgctggtc atgcatcatg ttccgttgta agtttgtaat
     1621 gctcccccat tgatatgcat aaacaaatat tggtgctgct gtattttaag tgtgttttcg
     1681 atataatttt ctgaatttac agaaaaatgt gataaattga a
//
LOCUS       XM_071831821             405 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841609), mRNA.
ACCESSION   XM_071831821
VERSION     XM_071831821.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..405
                     /gene="LOC139841609"
                     /note="uncharacterized LOC139841609; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841609"
     CDS             1..405
                     /gene="LOC139841609"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687922.1"
                     /db_xref="GeneID:139841609"
                     /translation="MDYHEAGRFCLDQLNELDELRLDAYENSVIYKEKTKLWHDNRIK
                     NPKEFKEGDLVILYNARYKLTPGKLKSRWNGPFIVNKMFPYGIIELVNSKGEEFKVNG
                     HRVRPYIDGFLETEIEYERNRVDSPSTSAAQS"
ORIGIN      
        1 atggattacc atgaggcggg tcgcttttgt ttggatcaat taaacgagtt agatgagttg
       61 cgccttgacg catatgaaaa ctcggttatt tacaaggaaa aaaccaaact ttggcatgat
      121 aaccgaatca aaaacccgaa agagttcaag gagggcgatc tagtcattct ttataatgct
      181 cgttataagt tgacgccagg aaagttaaag tcccgatgga acgggccatt cattgtgaat
      241 aagatgttcc catatggtat aattgagtta gtgaattcga aaggtgaaga gtttaaggta
      301 aatggccacc gggtcagacc ttacattgat ggttttcttg aaaccgaaat tgaatatgag
      361 agaaacagag ttgattctcc ttcaacttcc gcggctcaat cgtga
//
LOCUS       XM_071831823             537 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841610), mRNA.
ACCESSION   XM_071831823
VERSION     XM_071831823.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..537
                     /gene="LOC139841610"
                     /note="uncharacterized LOC139841610; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841610"
     CDS             1..537
                     /gene="LOC139841610"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687924.1"
                     /db_xref="GeneID:139841610"
                     /translation="MRILFLIFFVYLGHHAKAARRDIVAELFEDDHFRKEVGYGEDKL
                     STVLVGGSIVCDHACYDENSSLQSQPITGASLAVICDTSKKTSKSDWIKGTADEYGDF
                     LIDLPSHLHAIQNIENKCIVKILEVPKTSPCNQALTGEHRRIKFSSTDNGFRIYTAHE
                     IHLIPKDLQPCLKKQVTF"
     misc_feature    145..402
                     /gene="LOC139841610"
                     /note="Pollen protein Ole e 1 like; Region:
                     Pollen_Ole_e_1; pfam01190"
                     /db_xref="CDD:460103"
ORIGIN      
        1 atgagaatat tatttctcat ctttttcgtg tatctcggcc atcatgctaa ggccgctaga
       61 cgtgatattg tagcggaact ttttgaagac gatcatttta gaaaagaagt tggatatggg
      121 gaagataagc tctctacggt gttggttggc ggttctattg tgtgtgatca tgcttgctat
      181 gatgaaaatt catctcttca atcacaaccc attactggag catcactggc agttatatgc
      241 gacactagca aaaagacaag taaatcagat tggattaagg gaacagcaga cgaatacggc
      301 gacttcctta tagatctccc atcccatctt cacgcaattc aaaacatcga aaataaatgc
      361 atagtcaaga tcctcgaggt accaaaaacc tctccctgca accaagcctt aaccggtgaa
      421 cacagacgaa taaagttttc atcaacagat aatggatttc gcatatacac tgcccatgag
      481 atccatttaa tacctaaaga tttacagcca tgcctcaaga aacaagtcac attctaa
//
LOCUS       XM_071831824            1783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At2g30100, chloroplastic-like
            (LOC139841611), mRNA.
ACCESSION   XM_071831824
VERSION     XM_071831824.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1783
                     /gene="LOC139841611"
                     /note="pentatricopeptide repeat-containing protein
                     At2g30100, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841611"
     CDS             130..1605
                     /gene="LOC139841611"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At2g30100, chloroplastic-like"
                     /protein_id="XP_071687925.1"
                     /db_xref="GeneID:139841611"
                     /translation="MESICGITSFMNCVSVNRNPNRLIPQSNSSISVNSYSRVSIAHR
                     NPNTYIFCKSTKLDTVITSDNEDEMSEGFFEAIEELERMNREPSDILEEMNSKLSSKE
                     LQLMLVYFLTQEGRDSWCALEVFEWLKKENKVDDETMELMVSLMCGWVKKLVDGRHEI
                     KEVVDLLVDMDCVGLKPSFSMIEKVISLYWDNGEKSKGVLFVNEVLKRGIGWYEDGEI
                     RGRKGGPTGYLVWKMMEDGNYRDAIKLVIQIRESNLKPEVYSYLIAMTAVVKELNEFG
                     KALRKLKNFTKTGLVSTLDTEDTQLIQNYQSTLLEDGVRLSNWVIEEGGPSFNGVVYE
                     RLLAMYICAGRGLEAERQLWKMKLVGKEPDSNLYDIVLAICASQKETNAISRLLTRIE
                     VTSVLNKKKTLTWLLRGYIKGSHYEDAAETVFKMLDLGLYPEFLDRAAVLHGLRKRIN
                     QSENLETYFKLCKKLSDAGLTGPCLIYMYIKKYKLWVIKML"
     misc_feature    1198..>1467
                     /gene="LOC139841611"
                     /note="PIN (PilT N terminus) domain: Superfamily; Region:
                     PIN_SF; cl28905"
                     /db_xref="CDD:475124"
ORIGIN      
        1 aaaactctta attttctctt gcacactctt atccaataat aattccaccg tcaattaact
       61 gccagttccg ttatcaatct catggtttcc ctctaatttc atttcctact ttttcaattt
      121 ccccaaatta tggaatccat atgcggaatt acatctttta tgaattgcgt atcagttaat
      181 cgaaacccta atcgtttaat tccccaatct aactcctcaa tttccgtcaa ttcatactct
      241 agggtttcaa tcgcacacag aaaccctaat acatatatct tctgtaagtc tacaaaatta
      301 gatacagtca taactagtga caacgaagat gaaatgagcg aaggtttctt tgaagcaata
      361 gaagaattag aaagaatgaa tagagaacca tcagatatat tagaagaaat gaattcaaag
      421 ttatcatcta aagagttaca attaatgtta gtttatttct taacacaaga aggaagggat
      481 tcatggtgtg cattagaagt atttgaatgg ttaaaaaaag aaaataaagt tgatgatgaa
      541 acaatggaac ttatggttag tttgatgtgt ggttgggtta agaagttagt tgatggtaga
      601 catgagatta aagaggtggt tgatttactt gttgatatgg attgtgttgg gttgaaacct
      661 agttttagta tgattgaaaa agtgatttct ttgtattggg ataatggtga gaaaagtaaa
      721 ggtgttttgt ttgtgaatga ggttttgaag agagggattg ggtggtatga agacggtgag
      781 atacgcggac gaaaaggtgg cccgactggg tatcttgttt ggaagatgat ggaggatggt
      841 aactacaggg atgcaatcaa gttagtgatc caaattcgag aatctaattt gaaacccgag
      901 gtctacagct atttaatagc catgactgct gtagtcaaag aacttaatga atttggaaaa
      961 gctttacgca agttgaaaaa cttcacgaaa actggtttag tttccactct agatacagaa
     1021 gacactcagc tcatccaaaa ttaccaatct accctcttgg aagatggagt ccgcttatct
     1081 aattgggtaa tcgaagaagg aggcccatca tttaatggag tggtttatga acgtctttta
     1141 gccatgtaca tctgtgcggg ccgtgggctc gaggctgaga gacaattatg gaaaatgaaa
     1201 ttagtaggaa aagaacccga ctcaaatctt tatgacattg tgttagcaat atgtgcgtca
     1261 caaaaggaaa caaacgccat ttcacgatta cttacaagaa ttgaagtaac gagcgtgttg
     1321 aataagaaga aaacgttgac atggctatta aggggttaca tcaaaggttc tcattatgaa
     1381 gatgcagctg aaacagtgtt taagatgctc gatttgggtt tgtatcccga gtttttggac
     1441 cgggctgcag ttttgcatgg attaaggaaa agaattaatc aatctgaaaa tttggagact
     1501 tatttcaaac tttgcaagaa gttatctgat gcaggtttga ctggaccttg tcttatatac
     1561 atgtatataa agaaatataa gctttgggtg atcaaaatgc tttgaatttg cgaattagaa
     1621 actatgactt ttatatagtg tataaagatc attatgtata tgtgtaatgt tgtaatgtgc
     1681 aatgtgtata gaggtaataa tttgtgaggt gtactaaaaa tgttgatatt gcaagttccc
     1741 atgtgtatcc tgtaattttt gtttatcaag atttaaatgt ctc
//
LOCUS       XM_071831825             384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841613), mRNA.
ACCESSION   XM_071831825
VERSION     XM_071831825.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..384
                     /gene="LOC139841613"
                     /note="uncharacterized LOC139841613; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841613"
     CDS             1..384
                     /gene="LOC139841613"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687926.1"
                     /db_xref="GeneID:139841613"
                     /translation="MMLWGLWTKRNKHFHDQINDIYERVEVVEKRVLSDFHNANKRAD
                     SQGVDAMHNTHMSPWLRPQVGYIKFNCDAAWKRETGKVSLGFVARNHNGDVLISGARS
                     ECFAGSVLEAEAKAIYWAMTHARRK"
     misc_feature    208..>381
                     /gene="LOC139841613"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cd06222"
                     /db_xref="CDD:259998"
ORIGIN      
        1 atgatgcttt ggggtttgtg gacaaaaagg aacaaacact tccatgatca gatcaatgat
       61 atatatgaaa gagttgaagt ggtggaaaaa cgggttctat ctgactttca caacgctaat
      121 aagagagcgg attcccaagg tgttgatgcc atgcataaca cacatatgtc tccatggtta
      181 agaccacaag tcggttacat taagtttaac tgcgatgcag cttggaaaag agaaactggt
      241 aaagtaagtt tggggtttgt ggctcgtaat cacaacgggg atgttctaat ttcaggtgct
      301 cgatcagaat gttttgcagg ctcggtttta gaggctgagg ctaaagctat ctattgggcg
      361 atgactcatg cgcggaggaa atga
//
LOCUS       XM_071831826             369 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841614), mRNA.
ACCESSION   XM_071831826
VERSION     XM_071831826.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..369
                     /gene="LOC139841614"
                     /note="uncharacterized LOC139841614; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841614"
     CDS             1..369
                     /gene="LOC139841614"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687927.1"
                     /db_xref="GeneID:139841614"
                     /translation="MATIEKSLLKGIEVGKDNVLVSHLQYADDTIFFGEWSRSNALNL
                     RNLLKCFELSSGLKVNFNKSSLYGIGVEMSEVNLIARYLGCQVGNLPFIYLGIPIGTK
                     LSKLKDWNSVIEKFKSRLSG"
     misc_feature    <1..297
                     /gene="LOC139841614"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggcgacaa ttgaaaaaag tctacttaaa ggaattgaag ttggtaaaga taatgtgttg
       61 gtctcgcacc tccaatacgc ggacgacacg atctttttcg gggaatggag tagatcgaat
      121 gctttaaact taaggaatct tttaaaatgc tttgaacttt cttcgggttt gaaggttaat
      181 tttaataaaa gtagtcttta tgggatcggg gttgagatgt cggaagtaaa cttaatagct
      241 cgttatttgg gttgtcaagt tggtaacctt cctttcattt atttagggat accgataggg
      301 acaaaattgt caaagctgaa ggattggaac tcggtaattg agaaatttaa gtctaggctt
      361 tcgggttga
//
LOCUS       XM_071831828            2348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841615), mRNA.
ACCESSION   XM_071831828
VERSION     XM_071831828.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2348
                     /gene="LOC139841615"
                     /note="uncharacterized LOC139841615; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841615"
     CDS             64..2205
                     /gene="LOC139841615"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687929.1"
                     /db_xref="GeneID:139841615"
                     /translation="MSGTPNKRVHDDSGGNSSVARCSHTQDDSGSYSSMGPTNPKLAN
                     PSAPSDYHAASLDTGHDARLPKVPRTETNLRRSPLLPMYRMQSSSSLNDSQSDHAVKL
                     EERFDSRDNVNNNVRDSKAENRDVKAQSKELFQGARSDKDVRYTSDGHKETKYEVKTE
                     KEAYKSMKESKDHYKSGGNLEQQWHTSRSSNVHGQMNYTEAREAVSENKADVKDMDIK
                     RKDGKHQEWGDNNKDRNECQSNIYNEMKDPTKEKEIDRKHLQKENEKVRDKEKDADVL
                     SSSSKAMDQKNQKVTDGETNDKTLEKNVEIEGEKRNKGFEKDLDNVEGSTDTERNSFN
                     YGVQQRKLMLRHRGSPQIGNRSNGCNNIMNTGKGDVSAVLYRVGECMQELIKLWKEYE
                     KSEKLKTSETSITGPTLDIRIPAEHVCATNRQVKGGQLWGTDIYTNDSDLVAVLMHTG
                     YCRPTASPPPPAVQELRATVRVLPPQNCYGSTLRNNVRSRAWGAAIGCSYRVERCYIV
                     KKGGGTIDLEPCLTHTSTVEPTLAPVVVERTMTTRAAASNALRQQRFVREVTLQYNLC
                     NEPWIKYSISAIADKGLKKPLFTSARLKKGEVLYLESHERRYELCFNGEKMVKATSNE
                     AETNAVDSDNNNSNSNSNSNMMDVFRWSVCKKPLPQTIMSSIGIPMPPEHLQVLEENL
                     NWEDIQWSQTGVWISGKEYLLSRLHFLSPPI"
     misc_feature    1294..1539
                     /gene="LOC139841615"
                     /note="LCCL domain; Region: LCCL; cl02694"
                     /db_xref="CDD:445888"
ORIGIN      
        1 attttaatca tcaattgatt gtataacagg aaagtataaa ctctctgata tttcaggatc
       61 aagatgagtg gtacacctaa taagcgggtg cacgatgata gtggaggtaa ttcctccgtt
      121 gcaaggtgtt ctcatacaca agatgattct ggatcatact ctagcatggg gcccacaaac
      181 cctaagctgg ctaatccatc tgctcctagt gattatcatg ctgcttccct tgataccgga
      241 cacgatgccc gcttaccgaa agttccgcgg actgaaacga atttacgcag atcgccattg
      301 cttccaatgt accggatgca gtcatcatcg tccttgaacg actctcaatc tgatcatgct
      361 gtaaaactcg aggaaaggtt tgattcaaga gataatgtta ataataacgt tagagattcg
      421 aaggctgaga atcgtgatgt gaaggcacaa tcaaaagaat tgtttcaagg tgctagaagt
      481 gataaagatg ttaggtatac gagcgatggt cataaagaga ccaagtatga agttaagact
      541 gaaaaggaag catacaaatc aatgaaagaa tcaaaagatc actacaagtc tggtggaaac
      601 ttggaacaac aatggcacac atcacgcagt agtaatgtgc atggacaaat gaattacacc
      661 gaagcacgtg aggctgtttc ggaaaacaag gctgatgtaa aagatatgga cataaaaagg
      721 aaagatggga aacatcagga atggggagac aataataaag atagaaacga atgtcagagt
      781 aacatctata atgaaatgaa agatcctaca aaggaaaaag aaatcgatag aaaacattta
      841 cagaaggaaa atgagaaagt gagagataaa gaaaaagatg cagatgtatt atcatcatca
      901 tctaaagcta tggatcagaa gaatcagaaa gttacagacg gagaaactaa tgacaagaca
      961 ttagagaaaa atgttgagat tgaaggggag aaacgaaaca aaggtttcga aaaagatttg
     1021 gataatgtgg aagggagtac cgacacagag aggaattctt ttaattatgg tgttcaacag
     1081 cggaagctga tgcttcgaca taggggcagt ccacagattg gcaatcggtc taatggttgt
     1141 aataatatta tgaatacagg taaaggtgat gtgtcagctg tattatacag agttggtgaa
     1201 tgcatgcaag aattgataaa actatggaag gagtatgaaa aatctgaaaa attaaagaca
     1261 tctgaaacct cgataactgg ccctactctt gatattcgta tacctgccga gcatgtttgt
     1321 gctactaatc gccaagttaa aggggggcag ttatggggca cagacatata cactaacgac
     1381 tctgatctgg ttgccgttct aatgcacact ggctactgtc gtccaactgc gtctcctcct
     1441 ccacctgctg ttcaggagtt acgagctact gtcagagtcc tccctcctca aaactgttat
     1501 ggttctacac tgcgaaacaa tgtccggtct cgtgcatggg gggctgctat tggttgcagt
     1561 tatcgtgtag agcgatgtta cattgtgaag aaaggtggtg ggacaattga tcttgagcct
     1621 tgtcttacac atacatccac tgtagaacct actcttgctc ctgtggttgt agaacgcacg
     1681 atgactacaa gagctgcagc atcgaacgct cttcgtcagc aaagatttgt gcgtgaagtg
     1741 acattacaat acaacctttg caatgaaccc tggattaagt atagtataag tgcaattgcg
     1801 gacaaaggtc tgaagaagcc tctatttact tctgcaagat tgaaaaaggg tgaagttctg
     1861 tacttggaaa gccatgaacg caggtatgag ctatgcttca atggagaaaa gatggtaaaa
     1921 gcaacatcta atgaagcgga gacaaatgct gtggatagcg ataataataa tagtaatagt
     1981 aatagtaata gtaatatgat ggatgtattc agatggtcag tgtgtaagaa gcctcttccc
     2041 cagactatta tgagctcaat tggcatcccg atgccacctg aacatctaca ggtgttggaa
     2101 gagaatctga attgggaaga cattcaatgg tcgcagactg gtgtttggat ttcgggaaag
     2161 gaatatcttc tttccagact tcatttttta tcccctccta tctaaagccg cctaacacaa
     2221 ggttcatgtt gtgctttcaa ataagacttg tttataattg gttatgttat atgttttatg
     2281 tttcactatt ttaaacatgg atgatatagt taatcttatg ttgtattgca atagttgatg
     2341 acataata
//
LOCUS       XM_071831829            1866 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841617), mRNA.
ACCESSION   XM_071831829
VERSION     XM_071831829.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1866
                     /gene="LOC139841617"
                     /note="uncharacterized LOC139841617; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139841617"
     CDS             1..1866
                     /gene="LOC139841617"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687930.1"
                     /db_xref="GeneID:139841617"
                     /translation="MNKVANKVFGNWQWGDNSSKCSGRTRIMIGWDSNEVLCNILHST
                     NQVIHCCVEQHNSNKSFFYSFVYASNDDIERRQLWEDLILHKGVVKDAEWLVIRDFNV
                     SLNPEDKSSGSSVVTSEMNDFRECVENIEVEDLNQSGFHFSWVQKMHDVGKDRGVLKK
                     IDRAMCSNYFVDKYPRAHVEFQPHNVYDHTPMLLSIPNMARRKVKPFRFSNHLPYKPK
                     FFPLIGSVWDQQVQGFKMFSVVSKLKVVKKKLREFSREKGNVFDKVKKFKIELERVQT
                     DVMNDPDNQELRKEENFYFKAYKEASIDEERLLIQKTKVQWLKEGDQNTAYFHKVMKT
                     RLNRNRIEAIEDVHGVLFKGNEVPDQFIKFYTELLGKQYNVSDVRAVVMVDKEEIKDA
                     LWDIDDSKSPGPDGLNSKFFKAAWPVIDDDVCVAFHEFFLNGKLLGEVNALLCKILAN
                     RIKNSRDDVVDNKKRQISDNVLLAQELMRGYNWKKGKGRSKRFKARTSTFSLPFYSCY
                     GGFELMYYKKDQGESKLNSVRLLKDCLDEFSSYSGLVPNVDKSTIFMGSFAGNIKQGI
                     CALMPFDIGSFPARYLGLPLITTRLYHKDCHSLIDKAKKRIKDWKNRVLSFADRL"
     misc_feature    <775..1269
                     /gene="LOC139841617"
                     /note="Beta clamp domain. The beta subunit (processivity
                     factor) of DNA polymerase III holoenzyme, refered to as
                     the beta clamp, forms a ring shaped dimer that encircles
                     dsDNA (sliding clamp) in bacteria. The beta-clamp is
                     structurally similar to the trimeric...; Region:
                     beta_clamp; cl42470"
                     /db_xref="CDD:478224"
ORIGIN      
        1 atgaataaag ttgctaataa agtttttggt aattggcaat ggggtgacaa tagtagtaaa
       61 tgttctggta ggactagaat tatgattggt tgggattcaa atgaagtttt atgtaacatt
      121 cttcattcaa ctaatcaagt tattcattgt tgtgttgaac aacataacag taataaaagt
      181 ttcttttatt cttttgttta tgcttctaat gatgatattg aaaggaggca gttatgggaa
      241 gatttaattc ttcataaagg tgtggttaaa gatgctgaat ggcttgtaat tagagatttt
      301 aatgtcagcc taaaccctga ggataagtca agtggatctt ctgttgttac tagtgaaatg
      361 aatgatttta gggaatgtgt tgaaaatatt gaggttgaag acttaaacca atctggtttt
      421 cacttttcat gggttcaaaa aatgcatgat gtgggtaaag atagaggggt tcttaagaaa
      481 attgatagag ctatgtgttc taattatttt gtggataagt atcctagagc tcatgtggaa
      541 tttcagcctc ataatgtata tgatcatact cctatgttac tctccattcc taatatggct
      601 agaaggaaag tgaaaccttt taggtttagt aatcacttac cctataaacc taagtttttt
      661 cctttgattg gttctgtttg ggatcaacaa gttcaagggt tcaaaatgtt ctctgttgtt
      721 agtaagttga aggtggtcaa gaagaaatta agggaattta gtagagaaaa ggggaatgtt
      781 tttgataaag ttaagaagtt taagattgaa cttgaaaggg tccaaactga tgttatgaat
      841 gatcctgata atcaagagct gagaaaggag gagaattttt attttaaagc ttataaagaa
      901 gcttctattg atgaggaaag gttacttatt caaaaaacta aagttcaatg gttgaaggaa
      961 ggtgatcaga acactgctta tttccataag gttatgaaga ctaggcttaa tagaaacagg
     1021 attgaagcta ttgaagatgt gcatggtgtt cttttcaaag ggaatgaggt tcctgatcag
     1081 tttattaagt tttacactga gttacttggc aaacagtaca atgtttctga tgtgcgagcg
     1141 gtggtaatgg tggataaaga agaaattaaa gatgctttat gggacattga tgactctaaa
     1201 tctccaggtc cagatggtct taattctaaa tttttcaagg ctgcttggcc tgttattgat
     1261 gatgatgttt gtgttgcttt tcatgaattt tttcttaatg gtaagctttt gggtgaggtg
     1321 aatgctttgc tttgtaaaat tcttgctaat agaattaaga acagtcgtga tgatgttgtg
     1381 gataacaaaa aaagacagat tagtgataat gttcttcttg ctcaagaact gatgaggggt
     1441 tataattgga agaagggtaa gggcaggtca aagaggttta aggcaaggac atccactttc
     1501 tccttacctt tttactcttg ttatggaggt tttgaactta tgtattacaa gaaagatcaa
     1561 ggagagagta agttgaattc tgttagactg cttaaagatt gccttgatga gttttctagt
     1621 tattctggat tggttccaaa tgttgataaa agtactattt tcatgggcag ttttgctggt
     1681 aatattaagc agggtatttg tgctttaatg ccttttgata ttggtagttt ccctgctaga
     1741 tatcttggtt taccattgat tactactagg ctctatcata aagattgtca tagcttaatt
     1801 gataaagcaa agaaaagaat caaagattgg aagaacagag tgttatcttt tgctgatagg
     1861 ctgtag
//
LOCUS       XM_071831830            1383 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vacuolar cation/proton
            exchanger 3-like (LOC139841618), mRNA.
ACCESSION   XM_071831830
VERSION     XM_071831830.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1383
                     /gene="LOC139841618"
                     /note="vacuolar cation/proton exchanger 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 Proteins"
                     /db_xref="GeneID:139841618"
     CDS             1..1383
                     /gene="LOC139841618"
                     /codon_start=1
                     /product="vacuolar cation/proton exchanger 3-like"
                     /protein_id="XP_071687931.1"
                     /db_xref="GeneID:139841618"
                     /translation="MASSDTTEETWLPENGVVKSPTVISNCSAHMLSSSSVRKKTDLP
                     LLSNVPSSFIGNIVDSLHEVILGSKLSLLFLVVPVAIAGHYLRLPRPWIFSLSLLGLI
                     PLAERVSFLTEQISFYTGATVGGLLNATCGNATELVIAIFALIQNKVDVVKYSLLGST
                     LSNLLLVLGTSLICGGLANVSREQMFDRNQSDVNISLLLLSLLCNVIPILYKYAAASN
                     QHLAGDGLNTAKATLNLSRASCVIMLISYFAYLAFQLWTHHHIFESQQAEEVEDNDLN
                     NRKDESAVIGLGSAVLCLVGMTGVIALLSEYLVDTIEAASSSWGMPLSFISLFLLPVV
                     GNAAEHAGAIIFAFKNKLDITLGVALGSASQIAVFVVPLSVIVAWIIGVDMDLDFGLL
                     ETGSFAIAILVTAFTLQDGTSHYLKGVILLLCYVVIGTSVFLSDLQSDYMDDNTGVGI
                     QSSKHQISKI"
     misc_feature    190..1299
                     /gene="LOC139841618"
                     /note="calcium/proton exchanger; Region: caca2; TIGR00846"
                     /db_xref="CDD:273297"
ORIGIN      
        1 atggcttctt cagatactac agaggaaaca tggttaccgg aaaacggcgt cgtaaagtca
       61 ccaaccgtca tcagtaactg cagcgcacac atgttgtcat cttcttccgt tcgtaaaaag
      121 actgatttac cccttctctc caatgttcct tcctcattta ttgggaatat cgtcgacagt
      181 cttcatgagg tcattttagg aagtaaatta tcactccttt ttctcgtagt tccggttgcg
      241 atcgcgggtc attacctccg gttgccacgt ccgtggatat tttctttaag tttacttgga
      301 ctgattcccc ttgctgagcg tgttagtttt ttaaccgagc aaatttcatt ctacactggt
      361 gcaacagtgg gagggctgtt aaatgcaaca tgtgggaatg caactgagct tgtaattgca
      421 atatttgcat taatacaaaa caaagtggat gttgttaagt actctttatt gggttccact
      481 ctctccaact tacttttggt tcttggaact tctctcattt gtggtggtct tgcaaatgtt
      541 tcaagggagc aaatgtttga taggaaccaa tcagatgtga atatatctct attgctactg
      601 tcattgctat gcaatgtaat acccatattg tataaatacg ctgctgcaag taaccaacat
      661 ttggctggtg atgggttaaa tactgcaaaa gcaacactaa acttgtccag agcaagttgc
      721 gttatcatgc tcatttctta ctttgcctac cttgccttcc aattatggac tcaccaccat
      781 atctttgagt cacaacaggc ggaagaggtt gaagataatg acttgaataa taggaaagat
      841 gaaagtgcgg tgatagggct tgggagtgcc gttctatgtc tagttggaat gacgggggtt
      901 attgcgttgt tgtcggaata tttagttgac actattgagg cggcctcaag ttcgtgggga
      961 atgccattga gcttcattag cctcttcttg ttaccggttg taggaaatgc agccgagcat
     1021 gctggagcca tcatctttgc tttcaagaat aaactggata taactttggg cgtggcactt
     1081 ggttctgcat ctcagattgc ggtttttgtg gtcccattga gtgtaattgt tgcctggata
     1141 attggtgttg acatggatct tgactttggt cttcttgaaa ctggatcatt tgctattgca
     1201 atcttagtca cagccttcac attgcaggat ggaacttctc actatcttaa aggggtgatt
     1261 cttttgttat gctacgttgt cattgggaca agtgtattcc tcagtgattt acaaagcgac
     1321 tacatggatg acaatacggg tgtaggaatc caatcatcaa agcatcagat ctccaaaatc
     1381 tga
//
LOCUS       XM_071831831            1356 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SAC3 family protein C
            (LOC139841619), mRNA.
ACCESSION   XM_071831831
VERSION     XM_071831831.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1356
                     /gene="LOC139841619"
                     /note="SAC3 family protein C; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841619"
     CDS             148..1146
                     /gene="LOC139841619"
                     /codon_start=1
                     /product="SAC3 family protein C"
                     /protein_id="XP_071687932.1"
                     /db_xref="GeneID:139841619"
                     /translation="MCPVDERVQRERLRDLSVFERLNGNPNKSSSTLAVKKFCRTIST
                     NELRDADIRPLSVLQDTLDYLLTIFESKQHSFEAIHDFIFDRTRSIRQDLSMQNIITG
                     NQAVTIYEKIVKFHIVSHYKLRRSNLNSSSDSDISPMHYLNMEQLKKTLASLYHLYAQ
                     NQKSNSEFYSFYVLLHLDSEHQSTGESLSLWFRSIPYGVVKSKEMMFARKLLRYFRFG
                     NYKRFLETIEAEASCLQYYVIEPYVSEVRALGLSCMNGGGYKLNPYTLSDLSKRLLLE
                     ESDVESFCKNCGLDTSITDTGTKVMATKQTSFCFPKRYQKYYPLASKRLQKCYEEV"
     misc_feature    148..1023
                     /gene="LOC139841619"
                     /note="SAC3/GANP family; Region: SAC3_GANP; pfam03399"
                     /db_xref="CDD:460911"
ORIGIN      
        1 tcatacaaca ccggatcttc aaacacttcg aattatgctt ccactactag aaattcaaca
       61 tcgaatgtta ggggttcgtg ggtgcaaaac aaacaagaaa acaatgttac caaagatgtt
      121 ccaaacataa ttggaacttg ccctttcatg tgtccagttg acgagagggt gcaacgtgaa
      181 cggctacgcg atttatccgt atttgaaagg ctaaacggta acccgaataa atcttcatct
      241 acacttgcag ttaaaaaatt ctgcagaaca atctccacaa atgaattacg tgatgcagat
      301 attcgtcccc tttcagtatt acaggacacg ttagattacc ttttaaccat tttcgagtcc
      361 aaacaacatt cttttgaagc cattcatgac ttcatttttg atagaactag atccataagg
      421 caagacctta gtatgcaaaa tatcataaca ggaaatcagg cagttacaat ttatgaaaaa
      481 attgtaaagt ttcatatcgt ctctcattac aagcttcgaa gaagtaatct gaactccagt
      541 tcagattcag atatatctcc gatgcattac cttaacatgg agcagcttaa aaagacgttg
      601 gcatctttat atcacttgta tgcacaaaat cagaagtcaa attctgaatt ttattcgttt
      661 tatgtgcttc ttcatctcga ttcagaacat caatcaacag gggaatcatt atcgttatgg
      721 ttcagaagta ttccgtatgg tgttgttaag tctaaagaaa tgatgtttgc tcgcaagctt
      781 ttaaggtatt ttcgttttgg gaactacaaa cgttttcttg aaactataga agccgaagca
      841 tcttgtttac agtattatgt tattgaaccg tatgttagtg aggttcgtgc gttggggtta
      901 tcgtgtatga atggtggagg ctacaagctt aatccgtaca cactttcaga cttatcgaaa
      961 cgcttgcttt tggaggaatc ggatgttgaa tcattttgca aaaattgtgg tttagatact
     1021 tctattactg atacgggaac aaaggttatg gctacaaagc aaacgagttt ttgttttccg
     1081 aaaaggtatc aaaagtatta cccgttggct tcaaaacggt tacagaagtg ttatgaggaa
     1141 gtataatgaa gaattaagga agtagtgtat aagctgttgt aacaaaatcg attgtagttt
     1201 atcctgaatt tatcaggaaa taatgtagct agatcttaat ttgtttcgct tgtgtaaccc
     1261 gaaactgtgt atatgtataa tttgatataa ggtgttttga ttgatgtaga tattaaaaca
     1321 agttatgaac aatgttattg cttgtatgta gaatag
//
LOCUS       XM_071831832             507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841620), mRNA.
ACCESSION   XM_071831832
VERSION     XM_071831832.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..507
                     /gene="LOC139841620"
                     /note="uncharacterized LOC139841620; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841620"
     CDS             1..507
                     /gene="LOC139841620"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687933.1"
                     /db_xref="GeneID:139841620"
                     /translation="MVSNLLKEYFPNFAKGCRSNKPSPPYTTLKGMDRTTLKRSNGET
                     PFSLAYGTEAVLPAEIQVLSNRTTNTEHNKENLRINLDLVEERREAALIREASYKKTI
                     EKYYNKKVKRTTFKVGDYVLRLNSTSKVEYEGKLGANWEGPYVVSEAFSNGSYKLEDT
                     SRKAIPHT"
ORIGIN      
        1 atggtaagca atttgctgaa ggaatatttc ccaaattttg cgaaaggctg cagatctaac
       61 aaaccttcac ctccgtatac caccctcaag ggaatggaca gaacaaccct aaagagaagc
      121 aatggagaaa caccgtttag cttggcctat ggaacagaag cagtcctccc tgcagagatc
      181 caagtgttaa gtaaccgaac aacaaacaca gaacacaaca aagaaaacct gcgtataaac
      241 cttgacctgg tcgaagaaag aagagaagca gccctcattc gagaggcctc ttacaagaaa
      301 accatcgaga aatactacaa caaaaaggtg aaacgcacaa ccttcaaagt gggggattac
      361 gttctacgac tcaattccac cagtaaggta gagtacgaag gaaaattagg agccaactgg
      421 gaaggtccat acgtggtctc cgaagccttc agcaacgggt catacaagtt ggaagacact
      481 tccagaaaag caatacctca cacgtga
//
LOCUS       XM_071831833             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heme-binding-like protein
            At3g10130, chloroplastic (LOC139841622), mRNA.
ACCESSION   XM_071831833
VERSION     XM_071831833.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139841622"
                     /note="heme-binding-like protein At3g10130, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins"
                     /db_xref="GeneID:139841622"
     CDS             68..664
                     /gene="LOC139841622"
                     /codon_start=1
                     /product="heme-binding-like protein At3g10130,
                     chloroplastic"
                     /protein_id="XP_071687934.1"
                     /db_xref="GeneID:139841622"
                     /translation="MGMVFGMITVETPKFEVIQTTTDYEIRQYPPSVAAEVTYDPAEL
                     KGNKDGGFTLLANYIGVLGNPQNKKPEKIAMTAPVITKSAAEKIDMTAPVVTKGNEGG
                     RVTMQFILPEKYKKAEDAPVPVDERVVIREEGERKYGVVGFSGVATEKVVAEKVEKLK
                     KDLERDGFKVAGEYVLGRYNPPWTLPPFRTNEVMIPVE"
     misc_feature    95..655
                     /gene="LOC139841622"
                     /note="SOUL heme-binding protein; Region: SOUL; pfam04832"
                     /db_xref="CDD:461449"
ORIGIN      
        1 accacatatc acatacgttt cattttgcaa acagaaaaac aaattaaaca aaaaattatc
       61 aataaaaatg ggtatggtat tcggtatgat cacggtggaa acaccaaaat ttgaagtcat
      121 ccaaacaact acagactacg aaatccgtca atacccaccg tccgttgcag ctgaggtaac
      181 ctacgatcca gccgagctca aaggaaataa agacggcggc tttaccctcc tcgccaacta
      241 catcggcgtc ctaggtaacc cacaaaacaa aaaacccgaa aaaatcgcta tgacggcgcc
      301 ggtaattaca aagtcagcag cagagaagat agacatgact gcgccggtgg tgacaaaggg
      361 aaatgaagga ggaagggtga cgatgcagtt tatattgccg gagaagtata agaaggcgga
      421 ggatgcgccg gtgccggtgg atgagagagt ggtgattagg gaagaagggg agaggaaata
      481 tggggtggtg gggtttagtg gggtggcgac ggagaaagtg gtggcggaaa aggtagagaa
      541 attgaagaag gatttagaga gagatgggtt taaagttgcc ggagaatatg tgttggggag
      601 gtataatccg ccgtggactt tgccgccgtt taggactaac gaagttatga ttccggtgga
      661 atgaatggat caaacttctc tacgttttca tttactaaga ataaattacg gagtattact
      721 ctagtattag cataatgtac aaagttgagt tgtttgtatc gtgtactaat caagttttta
      781 atgcaaagga ttcttagttt ttggctttta gttggagtag aagtgtgcat tagaaaattg
      841 tatccagtgt tttaggggtt gtagtctttg actatttata acaaggggaa atgaatatgg
      901 tgc
//
LOCUS       XM_071831834             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841623), mRNA.
ACCESSION   XM_071831834
VERSION     XM_071831834.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139841623"
                     /note="uncharacterized LOC139841623; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841623"
     CDS             1..861
                     /gene="LOC139841623"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687935.1"
                     /db_xref="GeneID:139841623"
                     /translation="MDLVTRGRVGRRARVVQHRILWKNLHGAKAETFRVTVADRLSVE
                     GDNVAHTDVDHILNRMASTIREVAKEALGVTLGTSRAHKSSRESWWLSDDVQTKVALK
                     QTRFRELITFEEGTPAERTRVEERYKEAKREAKKDVAIAKDKAYEDLCRKLDSKEGAN
                     DIYRIDKARERRGRDLVNVKYIKDEAGQSIVREVLIRKRWEEYFSSLFGRDRPERNGE
                     LHDEVREYQNNYFCTRINHEEVRTALRKMGRNKAVGPDQIPIEARRCLGDDRKAKAME
                     DRSRIKWPTD"
ORIGIN      
        1 atggacctag tcacccgggg aagagttggc aggagggcca gggttgtgca acatagaatc
       61 ctttggaaga acctacatgg tgcgaaggcg gagactttta gagtgactgt tgctgataga
      121 ttgagtgtag aaggggataa cgtagctcat actgacgtag accatatatt gaaccgcatg
      181 gcatctacta tcagagaggt ggcaaaagaa gctttagggg tgacattagg gacatcgaga
      241 gcccacaaga gtagtagaga atcgtggtgg cttagtgatg atgtccaaac gaaagtcgcg
      301 ttaaagcaga cgaggtttag ggagctcatt acttttgaag aaggaacgcc tgcagagagg
      361 actagggtag aagaaagata taaagaagct aaaagagaag caaagaagga cgtagcaatt
      421 gcaaaagaca aagcttatga agatttatgt aggaaactag actccaagga gggagccaat
      481 gacatatata gaatagataa agctagggag cgaagaggca gagacttagt taacgttaaa
      541 tatatcaagg atgaagcagg tcaaagtata gtgagagaag tcctcattag gaaaagatgg
      601 gaagagtatt tttcatccct tttcggtagg gatagacctg agcggaacgg ggaactccac
      661 gacgaggttc gtgaatatca aaacaactat ttctgtacga ggattaacca tgaggaagtt
      721 agaacggccc tacgaaagat ggggagaaac aaagcagtag gaccagacca aatcccgatc
      781 gaggcgcgga ggtgcctagg agatgatagg aaggctaaag caatggagga tcgctctaga
      841 atcaaatggc ctacggatta g
//
LOCUS       XM_071831835             696 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841624), mRNA.
ACCESSION   XM_071831835
VERSION     XM_071831835.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..696
                     /gene="LOC139841624"
                     /note="uncharacterized LOC139841624; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139841624"
     CDS             1..696
                     /gene="LOC139841624"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687936.1"
                     /db_xref="GeneID:139841624"
                     /translation="MERAKERFSSQETTTFVSRRPHRFTSIAVGYLRSCPPTLGVGRP
                     RGVRRGSRVATFGRIRVGSWNIGTLTGKRIELVDTFLKSKVDIGCVQETRWRGEGAVD
                     VKDYRLWFSDRIMSVSLIIKEETFTVISAYAPHAGLSDAEKKRAEAEGYEGAHGGFGF
                     GPRNEEGRSILEFSIAHELVVPNSFFKKRDAQLATFYSGGRSTQIDFLLLRKGELRTC
                     KDCMVLPALTCSS"
     misc_feature    181..675
                     /gene="LOC139841624"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atggaacggg ctaaggaacg tttttcctca caagaaacaa ccacttttgt ttctcgccgg
       61 cctcaccgtt tcacgtcaat tgccgtcggt tacttgaggt catgtcctcc tactttaggg
      121 gtgggtaggc ctagaggggt tagaagaggt agtagggttg ccacctttgg taggattaga
      181 gtgggtagtt ggaatatagg aaccttgacg ggcaagagga tcgagctcgt tgataccttt
      241 cttaagagca aggtggacat agggtgtgtt caagagacta gatggagggg tgaaggggcg
      301 gttgatgtta aggactatag gttgtggttt agcgatagga ttatgtcagt tagtctaatt
      361 atcaaggagg agacttttac ggtcattagc gcatacgcac ctcatgcggg tttaagtgat
      421 gcggaaaaga agagagcgga ggcagaaggt tacgagggag ctcatggggg ctttgggttt
      481 ggtcctagaa atgaagaagg gcgctcaatt cttgagtttt ccattgccca cgagttggtt
      541 gtaccaaact ctttcttcaa gaagagggat gctcagttag ccacttttta tagcgggggt
      601 cgtagcaccc agattgactt tttgctcctt cgtaaagggg aactcaggac atgtaaggac
      661 tgtatggtcc ttccagcctt gacgtgctcc tcctag
//
LOCUS       XM_071831836            1365 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841625), mRNA.
ACCESSION   XM_071831836
VERSION     XM_071831836.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1365
                     /gene="LOC139841625"
                     /note="uncharacterized LOC139841625; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841625"
     CDS             1..1365
                     /gene="LOC139841625"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687937.1"
                     /db_xref="GeneID:139841625"
                     /translation="MKAVKDFFSNSQILKEVNNTIITLLPKVQSPCRVTDYQPISCCN
                     VIYKCISKIITTRIKGSLEDVVSANQSAFIPEMMKNYHLNRGTPRCSFKVDIQKACDT
                     VDWNFLEATLICFGYPRKMVKGRRGLRQGDPMSPYLFTLVMEVLTLMLQRNVSRRLRN
                     FFVVFYGAKVSSKRIQEYHLSDSNIWEVAARPDSAWSWRRLLHIRQFIRKFLVFQIGD
                     GKTASSCEGPTWPLDRFHKFTQLRSIAAPQLSNSNDMMGWRDNDAVVPRCSVSIVWNS
                     IRSSASKVPWFDAIWFSQGIPKHAFVTWLLVGERVKTYEKLKAWELKSNPILECVFCK
                     QCIESHAHLFFECRVTSHIWDRVSRLIHLPNQSFKWRDIFGMIMQVPGLKSVKMVVAK
                     LCFAATVYFIWQEINWRIFRKSRRLEDQVYDVIYSNVRLKLMTVIFKPSGNVDRLKMD
                     WHLG"
     misc_feature    58..>480
                     /gene="LOC139841625"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(283..300,388..390)
                     /gene="LOC139841625"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    391..393
                     /gene="LOC139841625"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    805..1059
                     /gene="LOC139841625"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaaagctg ttaaagattt ctttagtaat agtcagatac tgaaggaggt gaataatact
       61 attatcactc ttttgccaaa ggttcaatcg ccttgccgtg ttactgatta tcagccaatc
      121 tcatgttgta acgtcattta taaatgtatt agtaaaatca ttacgactag gattaaaggg
      181 agtctagagg atgtggtgag tgcaaaccaa tctgctttta ttcctgagat gatgaagaat
      241 tatcatctta atcggggaac gccgagatgc tctttcaaag ttgacattca gaaagcctgc
      301 gatacggtag actggaattt tctcgaggct actttaattt gttttggtta ccctaggaag
      361 atggtgaaag gtaggcgggg ccttcgccaa ggtgacccta tgtcgccgta tcttttcacg
      421 ctagttatgg aagttctcac tcttatgttg caacgtaatg tctctaggag attgagaaac
      481 tttttcgtgg ttttttatgg tgccaaagtg agctcaaaaa ggattcagga gtatcattta
      541 tcggattcta atatatggga agttgctgct agacctgatt cagcttggag ctggcgtcgt
      601 ctgttgcata tcagacaatt catacggaag tttttggtgt tccaaattgg cgatggaaag
      661 acagcatcat catgtgaagg accaacgtgg ccattagatc ggttccataa atttacccag
      721 ttacgttcta ttgctgctcc tcagctttct aattcgaatg atatgatggg ttggagggac
      781 aatgatgcag ttgtgcctag gtgctcggtt tctattgttt ggaattctat cagatcgtca
      841 gcttctaagg tcccttggtt tgatgcgata tggttctcgc aaggtattcc aaaacatgcg
      901 tttgttacat ggttactggt tggtgagcgg gtgaaaacat atgaaaaact taaagcatgg
      961 gagctgaaat ctaatcctat cctggaatgt gtgttctgta agcaatgcat agaatcgcat
     1021 gctcatcttt tttttgaatg tcgggttacg tcgcatattt gggatagagt aagcagattg
     1081 attcatcttc ctaatcaaag ttttaagtgg cgagatattt tcggtatgat catgcaggtg
     1141 ccaggtctca aatctgtcaa aatggtggtt gctaagctat gtttcgctgc tacggtgtac
     1201 ttcatttggc aggagataaa ttggaggatt tttaggaaat ctcgtcggtt agaggatcaa
     1261 gtctatgatg tcatttatag taatgtcagg ttaaaattaa tgacagttat ttttaagcca
     1321 tccggcaatg tggataggct taagatggac tggcatcttg gctag
//
LOCUS       XM_071831837             798 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841626), mRNA.
ACCESSION   XM_071831837
VERSION     XM_071831837.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..798
                     /gene="LOC139841626"
                     /note="uncharacterized LOC139841626; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841626"
     CDS             1..798
                     /gene="LOC139841626"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687938.1"
                     /db_xref="GeneID:139841626"
                     /translation="MVDVNHFGFRFTWNQSPNASTGILKKIDRVMENDVFISRFTNAY
                     IIFQPYRTSDHCLAEWRTNVQGYSMYRLVNKLRMLKTPIQRLMWCKGDIHKRVVQLRD
                     ELESAQKEVDAHPYSTTLREKENIALKHYNEVVFQEESLLKQKLKIEWLRVGYCNSNY
                     FHKVVKWRLNRSRIDVITDADNHVVKGAAVPQVFVRHYENFLGCASTCDEFVDPRSLF
                     TKQISQSQSDYMAQPVLEHEIRDAIFDIGNNKSPGPDDFTTSFFKDA"
ORIGIN      
        1 atggtggatg ttaaccattt cgggtttcgt ttcacttgga accaaagtcc taatgcttca
       61 acgggaattt tgaagaagat cgatagagtc atggaaaacg atgtttttat tagtaggttt
      121 acgaatgcct acatcatctt ccagccttat agaacctctg atcattgtct ggccgagtgg
      181 aggactaatg tccaaggcta ttcgatgtac aggttagtta acaagttacg catgttgaaa
      241 actccaattc aaagattgat gtggtgtaag ggtgatatcc ataaacgtgt tgtccaatta
      301 cgtgatgagt tggagagtgc tcaaaaagaa gtagatgctc atccttattc tactacttta
      361 cgtgaaaaag aaaatatagc tttaaagcat tacaatgagg tggtgttcca ggaggaaagc
      421 ttgttaaaac aaaaattgaa aattgagtgg cttcgagtgg gatactgcaa ctctaattac
      481 tttcataaag tagtgaaatg gagattaaac agaagtcgta ttgatgtaat cactgatgca
      541 gataatcatg tggttaaagg tgctgctgtc cctcaggtct ttgttcggca ttatgagaat
      601 tttttgggtt gtgcgagtac gtgtgatgaa tttgtagatc caagatctct ttttacaaaa
      661 caaatcagtc aaagtcagag tgattatatg gcgcagccgg tgttggagca tgaaattagg
      721 gatgcaattt ttgacattgg taacaacaaa tcgccaggtc cggatgattt tactacgagt
      781 ttctttaaag atgcctga
//
LOCUS       XM_071831838             840 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heat shock 70 kDa
            protein-like (LOC139841627), mRNA.
ACCESSION   XM_071831838
VERSION     XM_071831838.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..840
                     /gene="LOC139841627"
                     /note="heat shock 70 kDa protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 48 Proteins"
                     /db_xref="GeneID:139841627"
     CDS             1..840
                     /gene="LOC139841627"
                     /codon_start=1
                     /product="heat shock 70 kDa protein-like"
                     /protein_id="XP_071687939.1"
                     /db_xref="GeneID:139841627"
                     /translation="MDAKMDKKQVDDVVLVGRSTQITKVLKLLQKLFNRKKLSKRIHV
                     DEAVAHGAAKLSEDELGQKVKDLVLLDVVPLSLGVATYDGTTSVIIPRNTPIPAKKDH
                     IYTTAKDNQTHIMVNVYQGERVIAKENKWLGRLIIGVPLAPKGESKIKVVFDIEANGI
                     LKCSVEELTTGLKKKIVISGDNQRLSKEHIEKILKDAQKHKYEDEEYKIMVVARKDLE
                     VYIDKVKSKIKTHREDLMKIDIAIKDASHLLERSKIFNVGTYKDTLEQPEEICDPIIA
                     KLV"
     misc_feature    <4..834
                     /gene="LOC139841627"
                     /note="heat shock 70 kDa protein; Provisional; Region:
                     PTZ00009"
                     /db_xref="CDD:240227"
ORIGIN      
        1 atggatgcaa aaatggataa gaaacaagtg gatgatgtag tacttgttgg taggtcaact
       61 cagataacga aagtactaaa acttctgcaa aagcttttta acaggaaaaa gcttagtaag
      121 cggatccatg ttgatgaggc ggttgcacat ggagcagcaa agttaagtga agatgaacta
      181 ggtcaaaagg tgaaggattt ggtgttgtta gatgttgttc cgctatcact tggtgtcgct
      241 acatacgatg gcactacgag tgttataatt ccaagaaata ccccaatacc agccaaaaag
      301 gatcatatct acacaacagc taaggataac caaacccata tcatggttaa tgtttatcag
      361 ggtgagaggg ttattgctaa agaaaataag tggctaggga gattaataat tggtgtccca
      421 ctagcaccaa aaggtgaatc gaagattaag gtggttttcg atatcgaagc taatggtatt
      481 ctgaaatgct cggtagagga attaactact ggactaaaga agaagattgt aattagcggg
      541 gacaatcaac ggctttcaaa ggaacatatt gagaagatat taaaggatgc tcaaaagcac
      601 aaatatgagg acgaagagta caagataatg gtggttgcac gtaaagattt agaggtatac
      661 attgacaagg taaaaagcaa aatcaagacc cacagagaag atttgatgaa aattgatatt
      721 gcaataaagg atgcaagcca tttacttgaa agaagcaaga tttttaatgt tggtacgtat
      781 aaagatacac ttgaacagcc ggaggaaata tgtgatccaa tcattgctaa gcttgtgtaa
//
LOCUS       XM_071831839             956 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein LIGHT-DEPENDENT
            SHORT HYPOCOTYLS 5-like (LOC139841628), mRNA.
ACCESSION   XM_071831839
VERSION     XM_071831839.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..956
                     /gene="LOC139841628"
                     /note="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139841628"
     CDS             106..759
                     /gene="LOC139841628"
                     /codon_start=1
                     /product="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like"
                     /protein_id="XP_071687940.1"
                     /db_xref="GeneID:139841628"
                     /translation="MDLPSGSSGPRTGPSNPDGVTEPAAAGSSRSPAATQQPLSRYES
                     QKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFLKYLDQFGKTKVHVTGCPYFGFPNP
                     PAPCACSLKQAWGSLDALIGRLRAAYEENGGQPDSNPFGARAVRIYLREVKDSQAKAR
                     GIPYEKKKRKRGGSSSTANVTATAPNTAADGGDGGGGGGGASGDISSSEPAPVTSTV"
     misc_feature    196..567
                     /gene="LOC139841628"
                     /note="ALOG domain; Region: ALOG_dom; pfam04852"
                     /db_xref="CDD:398493"
ORIGIN      
        1 atcatctctt tttctttctc tttctctcaa aaaccaccac tatttatcta acaatcaatc
       61 aatcaaaatc ccaattacac ccaaaaacag aaatcttctc aatctatgga tttaccatca
      121 ggatctagcg gaccaagaac tggtccgtca aatcctgatg gtgtaacaga accagccgcc
      181 gcaggatcat caagatctcc tgcggctact caacaaccct taagtcgtta cgagtcacaa
      241 aaacggcgtg actggaacac gttcttacaa tacttaaaaa accacaagcc tccgttaacg
      301 cttgcacgtt gtagcggagc acacgttatc gagtttctta agtatctcga tcaatttggg
      361 aagacgaagg tgcacgtaac tggttgtccg tacttcggct tcccaaatcc acctgccccg
      421 tgtgcttgtt cgttgaaaca agcttggggc agcctcgacg cactaattgg gcggcttcga
      481 gctgcgtatg aggagaacgg cgggcagccc gattcgaacc cgtttggtgc tagagccgtg
      541 aggatttatt taagggaagt taaagatagt caagcaaaag ctaggggtat tccatatgaa
      601 aagaagaaga gaaaaagagg tggtagtagt agtacggcca acgtcaccgc aacggcaccg
      661 aatacggcag cagatggtgg tgatggtggt ggtggtggtg gtggagctag tggcgatata
      721 tctagcagtg agcctgctcc ggttacttcc actgtatagt attattatta tatatagttt
      781 tttgtattat tgaggaatta ttttgtagaa aatttctaat cattatttaa aaaaaaaaaa
      841 caaacattta tgattaaata tagcaatcat taatcaacat aataattgca ttccctatat
      901 ttccacaaat tgcttaaact aaactatcac atttttggca tcgcatatct tgtaga
//
LOCUS       XM_071831840             714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein LURP-one-related
            15-like (LOC139841629), mRNA.
ACCESSION   XM_071831840
VERSION     XM_071831840.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139841629"
                     /note="protein LURP-one-related 15-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841629"
     CDS             1..714
                     /gene="LOC139841629"
                     /codon_start=1
                     /product="protein LURP-one-related 15-like"
                     /protein_id="XP_071687941.1"
                     /db_xref="GeneID:139841629"
                     /translation="MMVVDPRFFSPFQVDIAIVRNTLTVADGNLSCVLDVNGNVIFII
                     KDIKFSLHDRHILLDSSENPILTFQKKRRSIHRRWQAFRGDSTNAKDLIFSTKKKALM
                     QRVTELNAFLSNNKDEEAGDYKVVGDWKKRSCAVYSYDGDTILAQMHDKHIDTCLESD
                     NKDTYGITVSPNADYALVVALMVILYEVNKDRKKKKKIKGKKKDGGSMENKDDDDDHI
                     DEEDEEDDEDDNEEDDDSD"
     misc_feature    1..552
                     /gene="LOC139841629"
                     /note="LURP-one-related; Region: LOR; pfam04525"
                     /db_xref="CDD:398294"
ORIGIN      
        1 atgatggtcg tggaccccag attcttttca ccctttcagg tcgatatagc cattgttaga
       61 aacacgttaa ctgttgccga tggaaatctc agttgcgtgt tggatgtcaa tggaaatgtt
      121 atttttataa ttaaagatat aaagtttagt cttcatgatc gacatatctt gttagattca
      181 tcagaaaatc ctattcttac attccagaaa aagcgtcgga gcatacatag aaggtggcaa
      241 gcttttagag gagacagtac aaacgcaaaa gatttgattt ttagtacaaa aaagaaagcg
      301 ttaatgcaac gagttacaga actaaatgcc ttcctatcaa acaacaaaga tgaagaagcc
      361 ggtgattata aagtcgtggg agactggaaa aaacgatctt gcgcagttta ttcgtatgat
      421 ggggatacta tccttgctca gatgcatgat aaacatattg atacatgtct cgagtctgat
      481 aataaagata catatgggat aacagtgtct ccaaatgctg attacgcgct tgtggttgca
      541 cttatggtaa ttctttacga ggttaataag gatcgtaaaa aaaagaagaa gattaaagga
      601 aagaagaaag atggtggtag tatggaaaat aaagatgatg atgatgacca tattgatgaa
      661 gaagatgaag aagacgacga agatgataat gaagaagatg acgattcaga ttga
//
LOCUS       XM_071831841            1242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841630), mRNA.
ACCESSION   XM_071831841
VERSION     XM_071831841.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1242
                     /gene="LOC139841630"
                     /note="uncharacterized LOC139841630; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841630"
     CDS             1..1242
                     /gene="LOC139841630"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687942.1"
                     /db_xref="GeneID:139841630"
                     /translation="MGKPSPSCTEKGGTTVVLNEKNKLVPTRTVTGWRVCIDYRRLND
                     STRKDHFPLPFIDQMLERLAGKEFYCFLDGFSEYFQIPINPIDQDKTAFTCPFGTFAY
                     RRMPFGLFNAPGTFQSLPFELMCDASDYALGAVLGQHHDNHFRPIYYVNESDVKDTFP
                     DEFLMWVEKDLEVPWFADFTNYLASSVLRKGFSYHQKKKFLADLKYYFWDHPYLFRVC
                     ADQVIKWCVYGKEAQQILEHCHQGPTGGPYGPCHTAKKVFDSGFYWPSIFKDARAFVH
                     TCDACQRTGTITKRDEMPQTGIQVCEVFDVWGINFMGPFPSSHTCKYILVTVDYVSKG
                     VEAKALPTNDAQVVVNFLKKLFSRFGIPKAHISNRGTYFANHLLEKMLKKYGVTNRFS
                     TAYHPQTSGQVENTNRALTYP"
     misc_feature    94..>351
                     /gene="LOC139841630"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(217..234,319..321)
                     /gene="LOC139841630"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    322..324
                     /gene="LOC139841630"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    352..>447
                     /gene="LOC139841630"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    688..852
                     /gene="LOC139841630"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    <967..1230
                     /gene="LOC139841630"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgggtaagc ccagtccaag ttgtaccgaa aaaggtggta cgaccgttgt gcttaatgaa
       61 aagaacaagc ttgttccaac gcgtacggtc actggatgga gagtttgtat agactatcgt
      121 cgtttaaacg actctactag gaaggatcac ttcccgctac cttttatcga ccaaatgctt
      181 gaacgattag cgggtaagga gttttactgc ttcttagatg gattctccga gtatttccaa
      241 attcccatca accccatcga ccaggacaag accgcattta cttgtccttt tggtactttt
      301 gcttatcgcc gcatgccttt cgggttattc aatgcaccag gaacttttca aagtttacct
      361 tttgagctaa tgtgtgacgc tagtgattat gcgttgggag cagtcttagg gcaacaccat
      421 gataatcatt tccgtccaat ttactatgtc aatgagtcgg atgttaaaga cacgttccct
      481 gatgagtttt tgatgtgggt cgaaaaggat ctcgaagtcc catggttcgc ggacttcaca
      541 aattacctag cctcgagtgt tcttcgaaag ggtttttctt atcaccaaaa gaagaaattc
      601 cttgcggatt tgaaatacta tttttgggat cacccatatc tttttcgagt ttgtgcggat
      661 caagtgatta aatggtgtgt gtatggaaaa gaagctcaac aaattcttga gcattgtcat
      721 caaggtccca ccggtggtcc atatggacca tgccataccg ccaagaaggt ttttgactcg
      781 ggcttttatt ggccctcgat ctttaaagac gctcgtgcat ttgtccacac ttgtgatgca
      841 tgccaaagaa cgggcaccat caccaaaagg gatgagatgc cacaaactgg catccaagtg
      901 tgtgaggttt ttgatgtgtg ggggattaat ttcatgggtc cattcccaag ttcccacacc
      961 tgcaaatata tcttagtaac agtcgattat gtatctaagg gggtggaggc caaagctcta
     1021 cctactaacg atgcacaggt cgtggtgaat ttcttgaaaa aacttttctc gcgctttgga
     1081 attccaaagg cgcacatttc caaccgtggc acctactttg caaaccacct tctcgaaaag
     1141 atgttgaaga agtatggtgt tactaatagg ttctccaccg cttatcaccc acaaacgagt
     1201 gggcaagtgg aaaatactaa tcgtgctttg acgtatcctt ga
//
LOCUS       XM_071831842            1356 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841632), mRNA.
ACCESSION   XM_071831842
VERSION     XM_071831842.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1356
                     /gene="LOC139841632"
                     /note="uncharacterized LOC139841632; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841632"
     CDS             1..1356
                     /gene="LOC139841632"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687943.1"
                     /db_xref="GeneID:139841632"
                     /translation="MYQAHLNVEWCNQVALISYLFKYINKANDRITAQLCDTETDEIK
                     EYYDCRYVSSCETIWRILKFDIHHHYPSVIRLPFHLEGQQQIIFDEDELIDEVLEKPS
                     VNTSMFIEWMNCNVSNQEARESTYVEFLTKFIWNKDNGSWIRRKRNTGTIGRIHHVAP
                     ASGDVFFLRILLNKVKGPTSYQDIRTVNGQLFNCYRDACYDLGLLDDDKEYIEGIQEE
                     FFGEGGHFVRKLFAQLLLSNTMSLPEVVFEKTFRYLSVDIIHSHRTDLILQEIDKLLQ
                     RNSSSSRSFSSMPFPSNHIRNISENHLIIDELSHDKSTLANEHSDFITKLASEQKKAY
                     NQIIKVVDHGKRAVLFLYGYGGTEKTFLWKTLLASLRSKREIVLNVASSGIAALLLSG
                     GQTAHSHFHIPLHSMDESFCTISPSSKLGELIRRTKVLIWDEALISAKKSRYSITNAW
                     A"
     misc_feature    976..>1305
                     /gene="LOC139841632"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(1063..1083,1297..1299)
                     /gene="LOC139841632"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgtaccaag ctcatctcaa tgttgagtgg tgtaaccaag ttgctttaat tagttatttg
       61 ttcaaataca tcaacaaagc taatgatagg attacagcgc agctctgtga tacagaaact
      121 gatgaaatta aagaatacta tgattgtcga tatgtttcat cttgtgaaac catttggagg
      181 attttgaagt tcgatataca tcatcattac cccagtgtta taagactacc gttccatttg
      241 gagggacaac agcaaatcat ctttgatgaa gatgaattaa ttgatgaggt attagaaaag
      301 ccatcagtca atacgtcaat gtttattgaa tggatgaatt gtaacgtttc caatcaagaa
      361 gcacgtgaat cgacttatgt cgaattcctg acaaagttca tttggaacaa agataatggg
      421 agttggatta ggcgcaaaag aaacaccggt acaattggac gtattcatca tgtggcacca
      481 gcgtctggtg atgtgttttt tcttagaata ctactcaaca aggttaaagg tccaacttcc
      541 tatcaagata ttcggacggt aaatggtcag ttatttaatt gctacagaga cgcttgctac
      601 gatttaggtt tattggatga tgataaagaa tatatagaag gtatacaaga ggaatttttt
      661 ggggagggtg gtcatttcgt cagaaaatta tttgcacaat tactattatc taacactatg
      721 agtctacctg aagttgtatt tgagaaaaca tttcgatatt tgtcggtgga tatcattcat
      781 tcccacagaa cagatttgat tttacaagag attgacaaat tacttcaacg caatagtagt
      841 tcatcgagaa gttttagttc aatgcctttc ccatcgaatc atataaggaa tatttcagaa
      901 aaccatctta ttatagatga gctctcccac gacaaaagta cacttgcaaa tgaacattca
      961 gatttcatta caaagttagc atccgaacaa aagaaggcat acaatcagat aataaaagtt
     1021 gttgatcacg gcaaaagagc tgtgttattt ttgtatggtt atggtggtac tgaaaaaacc
     1081 ttcctttgga aaacactctt agcttcattg cgcagtaaaa gagaaattgt tttaaatgtt
     1141 gcgtcaagtg ggatagcagc tttgctatta tctggaggtc agacggctca ttcacatttt
     1201 cacatacctc ttcattctat ggatgagtca ttttgtacta tttctccaag cagcaaattg
     1261 ggtgagctca ttaggaggac aaaagtgctt atttgggatg aggccctgat atcggccaaa
     1321 aagtcacgat attcaattac gaatgcgtgg gcataa
//
LOCUS       XM_071831843             528 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841634), mRNA.
ACCESSION   XM_071831843
VERSION     XM_071831843.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..528
                     /gene="LOC139841634"
                     /note="uncharacterized LOC139841634; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841634"
     CDS             1..528
                     /gene="LOC139841634"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687944.1"
                     /db_xref="GeneID:139841634"
                     /translation="MDTPFGGKPIVFGGDFRQILPVIQKGRRKDIVDASLNSSYLWDY
                     VTILKLTVNMRLCGIETDVDTRSFAQWILDIGNSDVGESEDEVIDIEIPQDLLITDVD
                     DPIGSMISTIYPDYFLNLGEEGSYLSSDSICASQRDAGFNNELYTIDFLNSIEVGGLP
                     KHNLRLKFGVPVMLL"
     misc_feature    <4..525
                     /gene="LOC139841634"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atggatactc cgtttggggg gaaaccaatt gtgtttggtg gtgattttag acaaatatta
       61 cctgttattc aaaaaggtag aagaaaagac atagtagatg catctctaaa ttcttcctat
      121 ttgtgggatt atgttactat tttaaaactt acagttaaca tgagattatg tggtattgaa
      181 actgatgttg atactagaag ttttgctcaa tggatacttg atataggcaa cagtgatgtc
      241 ggtgaatctg aagacgaagt tattgatatt gaaattccac aagatctttt gataacagat
      301 gttgatgatc caattggttc tatgatctca actatctatc cagattattt tcttaatctt
      361 ggagaagaag ggtcatattt gagctcagac agtatatgtg cgtcacagag agatgctggc
      421 tttaataatg aactatacac tatcgatttc ctaaatagta ttgaagttgg tggcttacca
      481 aagcataatc tgaggctcaa atttggtgta ccagttatgt tactttga
//
LOCUS       XM_071831844            1113 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841635), mRNA.
ACCESSION   XM_071831844
VERSION     XM_071831844.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1113
                     /gene="LOC139841635"
                     /note="uncharacterized LOC139841635; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841635"
     CDS             1..1113
                     /gene="LOC139841635"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687945.1"
                     /db_xref="GeneID:139841635"
                     /translation="MSIGGRLTLVKSVLNSLPMYFFSLFRVPPCVIKKLESVRCFFCG
                     GGTGNDSKISWVKWEEVLLPYGEGVLNLGSLKSKNLALLGKWWWRFLTEPTTLWVKVI
                     SSIYGPSGGFDLDRNHKLITCNSTWANIIKAGDHIDSIGVAFKDSFKKSIGDGSSTRF
                     WSDCWVGSSTLKSRFGRLFRLDRDSNALVKDRIIKDGCSLWNWIRLPGGRTLDQLQQL
                     TELIANSRLAVKPDTWKRLPSLVELDKRGIDLHTVRCPLCDDDVESVDHAILFCKHAY
                     DVWAKVFDWWGLSVTSSLSINEMFSNPPSIIVSDMGFMIWQAMIWTSGYLIWWNRNHK
                     VFNNKCWTSPVALCEVQVKSFEWISKRCKSKKDRVA"
     misc_feature    <700..834
                     /gene="LOC139841635"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtcgattg gtggacgcct aactcttgtt aaatcagtgc taaatagtct tccgatgtac
       61 ttcttctcac tcttccgtgt cccgccatgt gtgatcaaaa aacttgagag tgtgagatgt
      121 tttttttgtg ggggcgggac gggaaatgac tcaaaaattt catgggtcaa atgggaggag
      181 gttcttttac catatgggga gggtgtgtta aatttgggct ctttaaaaag taaaaatttg
      241 gctttgctcg gcaaatggtg gtggaggttt ttaaccgaac ccaccacttt gtgggtcaaa
      301 gttatttcaa gtatttatgg tccatcgggt ggttttgatt tagatcgtaa tcataaactt
      361 attacttgta actctacttg ggcaaatatt attaaagcag gtgatcatat tgactccatt
      421 ggtgttgcgt ttaaagactc tttcaaaaaa tcaatcggtg atggaagtag tacacggttc
      481 tggtcagatt gttgggtggg ttcgtccacc ctcaaaagca gattcgggag attatttcgg
      541 cttgatcgtg attctaatgc gttggtaaag gacagaatca tcaaagatgg ttgcagctta
      601 tggaactgga ttcgtctacc tggtggccga acattagatc aactccaaca gcttactgaa
      661 ttaattgcaa attcgagatt agcagttaaa ccggatacgt ggaaaagatt accttcactt
      721 gtagaattgg ataagcgtgg catcgatctc cacaccgttc gttgcccact ttgtgacgac
      781 gatgtggaat cggttgacca tgccatccta ttttgtaaac atgcgtatga tgtttgggct
      841 aaggtgttcg attggtgggg attaagtgtg acttcgtctt taagtattaa cgaaatgttc
      901 tcgaatcccc caagcattat agtttcggat atgggcttta tgatatggca agcaatgatt
      961 tggacatccg gatacctcat atggtggaat cggaaccaca aagtcttcaa taacaaatgt
     1021 tggacttctc cggttgctct atgtgaagtg caagttaaat cgtttgaatg gatctcgaaa
     1081 aggtgtaagt caaaaaaaga tcgagtggca tga
//
LOCUS       XM_071831845             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841636), mRNA.
ACCESSION   XM_071831845
VERSION     XM_071831845.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139841636"
                     /note="uncharacterized LOC139841636; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841636"
     CDS             1..504
                     /gene="LOC139841636"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687946.1"
                     /db_xref="GeneID:139841636"
                     /translation="MTATLWFKFLPRKVDIFLWRLRLESLPVRWNLSARGVEINSIVC
                     PVCNNGVETQDHVFFGCSLASKLRHWHKLRIWLNCSIPSFLSWDSFIVWLEGVRLSSI
                     SKNRVIASVITLLWAIWRFRNGIIFNVSFCTISSLFDVVRLLYFRWIKHRGHLFSNWN
                     LWLSMLL"
     misc_feature    <13..201
                     /gene="LOC139841636"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgacggcta ctctttggtt taagtttcta ccacggaaag ttgatatatt tttatggagg
       61 ttacgtttag agtctcttcc agttcgttgg aacctttctg cgaggggtgt agagataaac
      121 tcgattgtgt gcccggtgtg taataacggg gtggaaactc aggatcatgt tttcttcggg
      181 tgttccttgg cttcaaagtt aaggcactgg cacaagcttc gaatttggtt gaattgctct
      241 ataccttctt ttttgtcttg ggattctttc attgtttggc tagagggtgt tcgtttatcg
      301 tctatcagca agaaccgagt tatcgcctca gttatcacgt tactttgggc gatttggaga
      361 ttcagaaacg gcattatttt taatgtttct ttttgtacta taagtagtct atttgatgtt
      421 gttagattac tttattttcg ttggattaaa catagaggtc atttattttc aaattggaac
      481 ttgtggcttt ctatgctttt gtaa
//
LOCUS       XM_071831846             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841637), mRNA.
ACCESSION   XM_071831846
VERSION     XM_071831846.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139841637"
                     /note="uncharacterized LOC139841637; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841637"
     CDS             1..636
                     /gene="LOC139841637"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687947.1"
                     /db_xref="GeneID:139841637"
                     /translation="MCCVALNTVPLVKVFCHLFRLANHHKSWFTFFARQNFTKTPKSN
                     AGSWKETFFFVDQTVVGTGFPQTLIWCEKVEKDVNKMPALDDEEKKLLKQCVNAQLVH
                     RSYGNVMLRLGKISAYWPWEDVRPAIVGPDGKEMRMKKVLTAEEIAGISFRKQDVDKQ
                     LEQAAASEHVEETPAESGNKRKAAGTSEAQKKKKKTPKQLEDMRNDNFEDY"
ORIGIN      
        1 atgtgttgtg ttgcactcaa cacagtacca ttggtgaagg ttttttgcca cctattccgc
       61 ttagccaacc accataaatc ttggttcacc ttcttcgcac gccaaaattt cacaaaaacc
      121 ccgaaatcga atgcgggaag ttggaaagaa acttttttct tcgtcgacca gaccgtagta
      181 ggcactggct tcccgcagac gctcatttgg tgcgagaagg tagaaaaaga tgtgaacaag
      241 atgccagcgt tggatgacga ggagaaaaag ttgttgaagc agtgcgtcaa cgcacaactg
      301 gtgcaccgtt cgtatggtaa tgttatgctg cggttgggga agatctccgc gtattggcct
      361 tgggaggatg tgcggccggc catagttggc cccgatggaa aggagatgag gatgaagaag
      421 gtgcttaccg cggaggagat tgctgggatc tctttccgca agcaggatgt ggacaaacag
      481 ctagagcagg cagctgctag cgaacatgtg gaggaaacgc cggcggagtc aggcaataaa
      541 cgcaaggcgg ctgggacgtc cgaggctcag aagaagaaga agaagactcc taagcagctg
      601 gaggatatgc gcaacgacaa ttttgaggat tactag
//
LOCUS       XM_071831847             372 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841638), mRNA.
ACCESSION   XM_071831847
VERSION     XM_071831847.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..372
                     /gene="LOC139841638"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841638"
     CDS             1..372
                     /gene="LOC139841638"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687948.1"
                     /db_xref="GeneID:139841638"
                     /translation="MTSLRPMKISMRKLLDTDEKGEPFDLTLYRSMVGSLMYLAVSRL
                     DITLVVMVCAHFLSNPKKSHSKAVVRIFYCQVDRKSTSGSIQMLGNRLVSWSSKKQNY
                     VSLLTAESEYITAAHCCSLCL"
     misc_feature    220..>369
                     /gene="LOC139841638"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgacttctt taagacccat gaaaatctca atgaggaaat tgctggatac tgacgaaaaa
       61 ggggaaccct ttgatttaac gctttataga agcatggttg gttctttaat gtacttagct
      121 gtgagcagac tggacattac acttgttgta atggtctgtg ctcattttct atcgaaccca
      181 aagaaatcac actcgaaagc agtggttagg atattctatt gccaagttga tagaaaaagc
      241 acatctggat caatacagat gttgggaaat agactagtca gttggtcatc caaaaagcag
      301 aactatgtgt ctttattaac ggctgagtct gagtatatta ctgcagctca ctgttgttca
      361 ctatgtcttt aa
//
LOCUS       XM_071831848            1416 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139841639), mRNA.
ACCESSION   XM_071831848
VERSION     XM_071831848.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1416
                     /gene="LOC139841639"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139841639"
     CDS             1..1416
                     /gene="LOC139841639"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071687949.1"
                     /db_xref="GeneID:139841639"
                     /translation="MCVLGAWIYHKKPEYLKAYMRVRDKFKLKNEEKLQEQQSSEIKS
                     INKISMIKKDRVKMPLFYITRMDDEEYQLSEADFDSLKMDDIIFIYNYLIDLNESLPE
                     VDNMYKPIKGTIFDSIDVAYNVYQQYAQCGGFEIWKATQTPARRQKGDDGPRKIKLKY
                     FMCSREGFKPSKPCKVLDNNERHQKGEGHVDTNNMESGGPTVGHRILTTILGGLDKVC
                     ATPVDCRNLKRDIIAYIGKADAQIMVNMLTQRKKCLPDFSLEYFVDEKGVLRGFFWAD
                     EYSKHNCSAFGDVVSLDATIRTNKYYMVFIPFTGIDSHKKSVTFGARMLAKEDAYSYK
                     WLLNCFKTAFPDEPMIGMTDQDPAMKIAIEDVFETAHHRLCMWHIMKKFTIKVGVSIC
                     SSGLKARLAQIVWTSKLQPEDLEKRWGGVMSKFILKEHMWLVAMFNLRHNWIPAYFHE
                     SRMSGLMRTSSSFESENHMFG"
     misc_feature    208..>1410
                     /gene="LOC139841639"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgtgtgttc tcggtgcatg gatatatcat aaaaaaccag aatatcttaa agcttatatg
       61 agggttcgtg acaaattcaa attgaagaat gaagagaaac ttcaagaaca acaaagctcg
      121 gagattaaaa gcattaacaa aatttcaatg attaaaaaag atagagtgaa gatgccacta
      181 ttctacataa caagaatgga tgatgaggaa tatcagctct cagaggcaga ttttgatagt
      241 ttaaagatgg acgacatcat attcatctat aactacttga ttgatctgaa tgaatctcta
      301 cctgaagttg ataatatgta caaacctatt aagggaacca tttttgatag tattgatgtt
      361 gcatacaacg tttaccaaca atacgctcaa tgtggtgggt ttgaaatatg gaaagccaca
      421 caaactccag cgagacgaca aaagggtgac gatggaccac gaaaaattaa attgaaatac
      481 tttatgtgta gtagggaagg atttaagccc tcaaaaccat gtaaggtgtt agacaataat
      541 gagagacacc agaaaggaga agggcatgtg gataccaaca acatggaaag tggtggacca
      601 acggtcggac atcgtatact aacaacgatc cttggtgggc ttgacaaagt ttgtgcaacc
      661 ccggttgatt gccgaaacct taagagagac ataattgcat atatcggtaa agctgatgct
      721 caaattatgg tcaacatgct aactcagaga aaaaagtgtt tgcccgactt ctcactcgaa
      781 tattttgttg atgaaaaagg tgtactcaga ggtttctttt gggccgatga gtattcaaag
      841 cataattgct ctgcttttgg tgacgtggtc tcgcttgatg cgactattcg aactaacaaa
      901 tactatatgg tttttattcc gtttaccggc atcgacagtc ataaaaagtc tgtcacattt
      961 ggtgctagaa tgttggctaa ggaagatgct tattcgtaca agtggctatt aaattgcttt
     1021 aagaccgcgt tccctgatga gccaatgatt gggatgacag accaagaccc cgcgatgaaa
     1081 atagctattg aagatgtttt tgaaacggca catcatcggc tttgtatgtg gcacattatg
     1141 aagaaattta ctataaaggt tggtgtgtca atatgcagtt caggacttaa ggctcgactt
     1201 gctcaaatag tgtggacaag caagcttcaa ccggaagatt tagaaaagcg ttggggtggt
     1261 gtcatgagta aattcatcct taaagagcat atgtggttgg ttgccatgtt taacctaagg
     1321 cataactgga tacctgcgta ttttcatgaa tcgagaatgt cgggtctaat gcgtacatca
     1381 tcgagtttcg agagcgagaa tcacatgttt ggataa
//
LOCUS       XM_071831849            2454 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841640), mRNA.
ACCESSION   XM_071831849
VERSION     XM_071831849.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2454
                     /gene="LOC139841640"
                     /note="uncharacterized LOC139841640; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841640"
     CDS             1..2454
                     /gene="LOC139841640"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687950.1"
                     /db_xref="GeneID:139841640"
                     /translation="MAKDDDDVSGRGTTHISKLDFGDPLYLHPSDISSAPLINVKLKG
                     TENYKSWSCAIELALQTKNKMGFINGTFKRSEDNEVLGIQWDRCNAVVLSWILSSIFL
                     AVNLHHQMGLDDVYQPIRSNILTRDPLPSVNTAFAIISREESHKKSNMSGKKSSESSA
                     FYSNSFKPSFNSQPKDLKCVKCGRTNHTVDKCFKVVGYPTRTGNLKCTKCGMTNHTVD
                     RCFKVVGYPNNLKRKGFGSNNNIKGNSSKSNCENQGSSSSTPESLSNEQVMRLLSLLD
                     EKGGVKPGVSSMSGNFANFNIVDSGANQHMTNSVKNFVSYIDVSDLNLTVSHPNGTKA
                     KVSKIENLKISNNVVLQDVLVVLDYCVSLLSVYCLVRDSKLFVGFDESACYIQDLVSK
                     KTLVTGSQCGGLYYLTGNEKGIVGSSNISKINNNSIDLWHCRLGHPAEQALLCLKDSL
                     KLNDKILNGPCDVCHKAKQTRESFQNSVHKTTELGELVHLDVWGPYKVQSHKGFKYFL
                     KVVDDFARGVWVYLLKTKEEVAECLKNLFHLLKNQFNKTVKCFRSDNGTEFINSRVSE
                     FVQNNGIIHQTSCAYTPQQNGLGERKHRHLFNVARALMFQGRIPLRFWDECILTAVYL
                     INRTPTSLLNGKCPFELIYKRILNLSHLRVFGCLAFSTILNNKDKFSERSEKCVFLGY
                     SSVKKGYKLYSLDNKNCFVSRDVNLNDEGEDLDHHSDGSSDPMPVDNSDDSVDTVESE
                     EYGRATSPTTTLNDKIINPEGTVLQNKEGESSTYTFQPSVRKSQRNTSIRKRFNEFVL
                     DGNVKYGIDKFVNYSKLNK"
     misc_feature    82..213
                     /gene="LOC139841640"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    1207..1407
                     /gene="LOC139841640"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    <1453..1782
                     /gene="LOC139841640"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atggctaaag atgatgatga tgtttctggt aggggtacta ctcatattag caaactggat
       61 tttggggatc ctctttatct tcacccaagt gatattagta gtgctccttt aataaatgta
      121 aagctaaaag gaactgaaaa ctataaatct tggtcttgtg caattgaact tgctttacaa
      181 acaaagaata aaatgggttt tataaatgga acttttaaaa gaagtgaaga taatgaggtt
      241 cttggaatcc agtgggatag atgtaatgct gttgttttat cttggatact tagttctatc
      301 ttcctagctg tcaatttaca tcatcaaatg ggtttagatg atgtttatca acccatcaga
      361 agtaatatac tcaccagaga tccactgccc tcagtgaata ctgcttttgc aataatttca
      421 agggaagaat cacacaaaaa atcaaatatg agtggaaaaa agagttctga atcttctgct
      481 ttctattcta attcatttaa accaagtttt aactcacaac ccaaagattt aaagtgtgtt
      541 aaatgtggta gaacaaatca tacagttgac aaatgtttta aagtggttgg ttatcctact
      601 agaactggaa atcttaaatg cacaaaatgt ggtatgacta atcacactgt tgacagatgt
      661 tttaaagtgg ttggatatcc taataatcta aaaagaaagg gatttggttc aaataataat
      721 attaaaggaa attctagtaa atccaattgt gaaaatcaag ggagcagctc ctctactccc
      781 gaatctttga gtaatgaaca ggttatgagg ttattaagct tacttgatga aaaaggaggg
      841 gttaagcctg gtgtttcaag tatgtcaggt aattttgcaa actttaatat tgttgattct
      901 ggtgctaatc agcacatgac taattctgtt aaaaactttg tgtcatatat tgatgttagt
      961 gatcttaact taactgtctc tcatccaaat ggtactaaag ctaaagttag caaaattgaa
     1021 aatcttaaaa tttccaataa tgttgtttta caagatgttc tggtagttct agactattgt
     1081 gtgagtttgt tatctgtgta ttgtttggtt agagatagta agttgtttgt tggttttgat
     1141 gagagtgcct gttatattca ggacttggtg tccaagaaga cacttgtgac tggtagtcaa
     1201 tgtggtggat tatattatct aactggaaat gaaaaaggta ttgttggtag ttccaacatt
     1261 agtaaaataa ataacaattc tattgatttg tggcattgca gactgggtca tccagcagag
     1321 caggctttgt tgtgtttaaa agatagtttg aaactaaatg ataaaatttt aaatggtccc
     1381 tgtgatgtat gccataaggc aaaacaaact agggaatctt ttcaaaatag tgttcataaa
     1441 accactgagt tgggtgaact tgtgcatcta gatgtctggg gtccttataa agttcaaagc
     1501 cataaaggtt ttaaatattt tcttaaagtt gttgatgact ttgctagagg tgtttgggtt
     1561 tatttactaa aaactaaaga agaagtggca gaatgtttaa aaaatttatt tcatctttta
     1621 aaaaatcaat ttaataaaac tgtcaagtgt tttagatcag ataatggaac agagtttatt
     1681 aattctagag taagtgaatt tgttcaaaac aatgggatca ttcatcagac atcttgtgca
     1741 tatactccac aacaaaatgg tttaggagaa aggaaacata ggcacttgtt taatgtggca
     1801 agagctctta tgtttcaagg gagaattcct ttaaggtttt gggatgaatg tattttaact
     1861 gctgtatatt tgattaacag gactcctaca tctttactga atggaaagtg tccctttgaa
     1921 ctcatttata aaagaattct aaatctttcc cacttaaggg tttttggttg tcttgctttt
     1981 tctactattt taaacaataa agacaagttt tctgaaagat ctgaaaaatg tgtttttctt
     2041 ggctattctt ctgttaaaaa gggatacaag ttatatagtt tggataataa aaattgtttt
     2101 gtgtcaagag atgtcaatct caatgatgaa ggggaagatc tagaccatca tagtgatggc
     2161 agtagtgacc caatgcctgt tgataattct gatgattctg ttgatacagt agaatctgaa
     2221 gagtatggta gggcaacaag tcctacaaca acactcaatg ataaaatcat aaaccccgag
     2281 ggcactgttt tacaaaataa agaaggtgaa tcatctactt atacttttca accttctgtc
     2341 agaaaatctc aaaggaacac ttccattcga aaaagattta atgaatttgt tttagatgga
     2401 aacgtgaaat atggtataga taagtttgtt aactattcaa agcttaataa ataa
//
LOCUS       XM_071831850            1032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841641), mRNA.
ACCESSION   XM_071831850
VERSION     XM_071831850.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1032
                     /gene="LOC139841641"
                     /note="uncharacterized LOC139841641; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841641"
     CDS             1..1032
                     /gene="LOC139841641"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687951.1"
                     /db_xref="GeneID:139841641"
                     /translation="MALARIKNRLSSSTAPAPPPSPAPTSASGNRTEPAFSTYLEKMK
                     HMPDLNLPEYVNRSMIADVDYRLIKSKDRNSISELMRSATKYGVFRISGHGISIEELH
                     QAFSEADFCFGLLADKWSRDGDREEFQWSRSALSAAERRRDVAREERFRKFSQKMDNL
                     ASKLEAIADDAAKIVGSYGSKRSRKKIMENETRMTLFKHNNSALQPHTPRSSQTPRAA
                     NDSKKDPCSFALSLHIPTEPGDFVFVSDEGPLSFRTSPDTIVFTLGQQIEEWSCGEFK
                     GAMGEINIEPEIQADEEQGGAYSVELKCSPLILNRAVDRIYTFSITDQAFVLLALVLL
                     YSIYYYLLS"
     misc_feature    196..>354
                     /gene="LOC139841641"
                     /note="non-haem dioxygenase in morphine synthesis
                     N-terminal; Region: DIOX_N; pfam14226"
                     /db_xref="CDD:464110"
ORIGIN      
        1 atggctctag cccgaatcaa aaatcgctta tcatcatcaa cagcacccgc accaccacct
       61 tctcctgcgc caacatctgc tagcggcaac cgaacggaac cagctttcag cacttacctt
      121 gagaaaatga aacatatgcc tgatctcaat cttcctgaat atgtcaacag atcaatgatt
      181 gcggatgttg attatcgatt gattaaaagt aaggacagaa attcaattag tgagttgatg
      241 agatcggcta caaagtatgg agtgtttagg ataagtggac atgggatatc gattgaggag
      301 ttgcatcagg cgtttagcga ggccgatttt tgttttggat tgttggctga taagtggagt
      361 cgagatggtg atcgtgagga gttccaatgg tctcgttctg ccttatctgc ggcagaacgt
      421 aggcgagatg tggcccgaga ggagagattt cgaaagttta gccaaaagat ggataatctt
      481 gcaagtaagc tagaagcgat tgcagatgat gctgcaaaga ttgtaggaag ctatggaagc
      541 aagagatctc gaaagaagat aatggaaaac gaaacacgaa tgaccttgtt taagcacaat
      601 aactctgctc ttcaacctca caccccacgc tcatctcaaa ctccacgtgc agccaatgat
      661 agcaaaaaag acccgtgttc atttgctcta agcctccata tcccaaccga accaggtgat
      721 tttgttttcg tgtccgatga aggcccactg tcgtttagaa caagtccgga cacaattgtg
      781 ttcactcttg gacaacaaat agaggaatgg agctgcggag agtttaaagg tgcaatgggg
      841 gagataaaca tagagccaga aatacaagca gatgaagaac aaggaggagc atattcagtg
      901 gaactcaagt gttcaccttt gattcttaat cgagctgttg atagaatcta cacgttttca
      961 attactgatc aggcctttgt tttacttgct cttgttcttt tatactctat ttattactat
     1021 ttactatctt ag
//
LOCUS       XM_071831851             975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841642), mRNA.
ACCESSION   XM_071831851
VERSION     XM_071831851.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..975
                     /gene="LOC139841642"
                     /note="uncharacterized LOC139841642; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841642"
     CDS             1..975
                     /gene="LOC139841642"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687952.1"
                     /db_xref="GeneID:139841642"
                     /translation="MVAECFAVEKLRTYKREKKSEVIDWEEISFPALDTITPSDKPVT
                     INGRIFEREVHRVYLDGGSACDIMYEHCFNQLSPAIKARLNTPKVPLVGFSGERCWPI
                     GEVDLDFTIGEPPLSRTETLDFIVVRSTSQCNILLERIAMMKIGKIVSTVHQLVKFYT
                     PEGIGTLVSTYDREKVIMAIRETDKRPGECILETRKEDSSKEKISINPLFPEQQVTIG
                     GALPAEMKRKLRKLLQANIDIFAWEYRDMTGIPRMLSIDETIFSTEQKLNDYKHLKPI
                     HQKKRNLANGRDEAACKEVEELLQDGIIREARYPTWVANPVMVKKSDG"
     misc_feature    <4..>198
                     /gene="LOC139841642"
                     /note="Protein of unknown function (DUF707); Region:
                     DUF707; pfam05212"
                     /db_xref="CDD:461590"
     misc_feature    133..408
                     /gene="LOC139841642"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(178..180,184..186,190..192,271..279,403..405)
                     /gene="LOC139841642"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    178..186
                     /gene="LOC139841642"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    178..180
                     /gene="LOC139841642"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(271..282,292..303)
                     /gene="LOC139841642"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggtcgcag aatgcttcgc cgttgagaag ctaaggacct ataaaaggga aaaaaagagc
       61 gaggtgatag attgggaaga gatctccttc ccagccctcg ataccatcac tccctcagac
      121 aaacctgtta caatcaacgg acgaatcttt gagagagaag tacatagagt ttacttagat
      181 ggcggcagtg catgcgacat catgtacgag cattgcttca atcaacttag ccctgccatc
      241 aaagctcgcc taaacacacc aaaagtacct ctagtcggat tctctggaga aagatgctgg
      301 cctatcggag aggtagacct cgatttcacc atcggagagc caccgttgtc caggactgaa
      361 acacttgatt tcatagtagt ccggtccacc tcacaatgta acattctact agaaagaata
      421 gccatgatga aaattggaaa aattgtatcc actgtacacc aattggtgaa gttctataca
      481 ccagaaggga ttggcaccct agtttcaacc tatgatcggg agaaagtgat catggctatc
      541 agggaaacgg ataaaaggcc aggggaatgt atccttgaga ctagaaagga agattcgagt
      601 aaagaaaaaa tctccatcaa ccctttgttc cctgagcaac aagtaactat cggaggtgca
      661 ctacccgcgg aaatgaagag aaagcttcgt aagctactac aggccaacat tgatatcttc
      721 gcttgggaat acagagatat gaccggcatc cctcgaatgc tcagtatcga tgaaacaatc
      781 ttctccacag agcaaaagct taacgattac aagcacctaa agccaataca tcagaagaaa
      841 agaaacctcg ccaacgggag agatgaggct gcttgtaaag aggtggagga actactccaa
      901 gatggcataa tcagagaagc aagatacccc acatgggttg ccaaccccgt catggtaaag
      961 aaatcagatg ggtga
//
LOCUS       XM_071831852            1005 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841643), mRNA.
ACCESSION   XM_071831852
VERSION     XM_071831852.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1005
                     /gene="LOC139841643"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841643"
     CDS             1..1005
                     /gene="LOC139841643"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687953.1"
                     /db_xref="GeneID:139841643"
                     /translation="MIGFHQSRCDTSLFIYRQGSDTAYLLLYVDNIVLTASSTGLLQR
                     IISSLHKEFAMTDLGTLNYFLGIHATRNASGMFLSQRQYATEVIERAGMPTCHPCRTP
                     VEPGAKLTSHGPPVKDPTLYRSLAGALQYLTFTRPDITYTVQQICLFMHDPREQHMHA
                     LRRIIRYIKGTSDLGLQLYASSPTTLVAYSDADWAGCPTTRRSTSGYCVFLGNNLLSW
                     SSKWQLTPSRSSAEAEYRGVANAVVETCWIRNLPASFIVLSPPLLWYTVITSARSTYL
                     LTQFSISGPSTLRSTFTLFAILLLRGRYGFFTCHPDISLLTSSPKVSRMYCLMSSDPV
                     "
     misc_feature    <4..312
                     /gene="LOC139841643"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    559..>753
                     /gene="LOC139841643"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgattggtt ttcaccaaag ccgctgtgat acatcccttt ttatttatcg ccagggatcc
       61 gacacagcct acctgctttt gtatgttgat aatattgtgt tgactgcttc ttctacaggt
      121 ttacttcagc ggattatttc ttccttacat aaggaatttg ctatgactga tttgggtacc
      181 ttgaactact ttcttgggat tcacgccacc cgcaacgcat ctggcatgtt cctctctcag
      241 aggcaatatg ctaccgaggt tattgagcgg gccggaatgc ccacttgtca tccttgcagg
      301 accccggttg aaccgggtgc caagcttact agtcacggac ctcctgtgaa ggacccgact
      361 ctctatcgga gccttgcagg cgcattacag taccttacat tcactcgccc agatatcaca
      421 tacactgttc agcagatatg cctcttcatg catgatcctc gagaacagca catgcatgcc
      481 ctcagacgga tcattcgtta tataaagggt actagtgatc tcggtttaca gttatatgca
      541 tcatcaccca ctactttggt tgcatactct gacgctgatt gggccggctg cccaactacc
      601 agacgctcta cctctggcta ttgtgttttc ctcggtaaca accttctatc atggtcgtca
      661 aagtggcaac tcacgccctc tcgctctagt gccgaagcgg agtaccgtgg ggttgccaat
      721 gccgttgtag agacttgctg gatccgtaat cttcccgcga gctttattgt cctctcacct
      781 ccgctacttt ggtatactgt gataacgtca gctcgttcta cctatctact aacccagttc
      841 agcatcagcg gaccaagcac attgagatcg acattcactt tgttcgcgat cttgttgctt
      901 aggggcaggt acgggttctt cacgtgccat ccagatatca gtttgctgac atcttcacca
      961 aaggtctccc gtatgtattg tttgatgagt tcagatccag tttga
//
LOCUS       XM_071831853            1605 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841644), mRNA.
ACCESSION   XM_071831853
VERSION     XM_071831853.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1605
                     /gene="LOC139841644"
                     /note="uncharacterized LOC139841644; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841644"
     CDS             1..1605
                     /gene="LOC139841644"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687954.1"
                     /db_xref="GeneID:139841644"
                     /translation="MKEGLKCHPKKKLSVKHAGPSAVGGSSGDTHPKSVKKRKQSTQQ
                     YAAEYARSSNPIVFDQNPYVLSLQSVQSYHQHSSASQGFTNDYEDICDCNCVCSYCGA
                     MFWYEERLRVSPSSLSYNRCCEGGRVSLPLEEVPPQMIIDLLGDKQFMDNIRAYNQMF
                     SMASYGAHIDDHVNNGRGPYVFKVSGQVYHWIGSLCPEEGNPPRFLQLYIYDTGNEAS
                     NRMRFFGGDNTGSLSHDVVVNLIDLLNSKNELVKLFRTARDKITESDVPDLRIRLFSV
                     IGSRQYEYPTSDALGAIVYGFDYGTRTDYDLIIECKGGTPQRVNKLHPSYMSLQFPLL
                     FVFGQPGYHPGMTLRSISGRTSRRKKELTMNMFYSYQIHDRFNQFGLLLRCGRLFQQY
                     IVTVYCSIELDRQDYVRCNQRDIHNEYLFGLYDALDRGDHYGSEVGSRTILPASFTGG
                     PRYMYIHYLDALAICRVYGNPRFFITFTCNSKWPEIKRYLQKYSHLSANDRADIISRV
                     FHMKVTLYVAILKEEELLGSWRGVRF"
     misc_feature    1111..1596
                     /gene="LOC139841644"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgaaagagg gtttaaaatg ccacccaaaa aaaaaattgt ctgtgaagca cgctggccca
       61 tctgctgttg gtggttccag tggtgataca catcctaagt cagtcaaaaa aagaaaacaa
      121 tcaactcaac aatatgccgc tgaatatgct agatcttcta atcctatcgt ctttgatcag
      181 aatccatatg ttttatctct tcagtctgtt caatcgtatc atcaacattc gagtgcttca
      241 caaggtttta ctaatgatta tgaagacatt tgtgattgta attgtgtatg ttcttattgt
      301 ggtgctatgt tttggtatga agaacggtta agggtatcac catcttcttt gagttataat
      361 cgttgttgcg aaggtggtcg tgtttcatta cctctagaag aggttcctcc acaaatgatt
      421 atagacttat taggcgataa gcaatttatg gataatataa gggcatataa tcaaatgttt
      481 agtatggctt cttatggtgc acatatagat gatcatgtta ataatggtag ggggccatat
      541 gtatttaagg tttctgggca agtgtaccat tggataggat ctttatgtcc tgaagaaggt
      601 aatcctccta ggtttcttca actgtatata tatgatacgg gtaatgaagc aagtaataga
      661 atgaggtttt ttggtggtga caatactggt agcctcagtc atgatgtagt tgttaatcta
      721 atagatcttt tgaactcaaa gaatgagtta gtaaaactct ttaggactgc aagggataag
      781 attaccgagt ctgatgtgcc agatttgagg attcgattgt ttagtgtgat aggttcaaga
      841 caatatgaat atccaacttc tgatgcatta ggagctattg tttatggctt tgattatggc
      901 acgcggaccg attatgatct tattatcgag tgtaaaggag gtacacctca gcgtgttaat
      961 aaattgcatc cgtcatacat gtcccttcag tttcctctgt tgtttgtttt tggtcagccg
     1021 ggctaccatc caggaatgac attgagaagt attagtggta gaacaagcag gcgtaagaaa
     1081 gagttaacta tgaatatgtt ttacagttac caaatacatg acaggttcaa tcagtttggt
     1141 cttcttttga gatgcggacg gttgtttcaa cagtacatcg ttactgtata ttgtagtata
     1201 gagttagaca ggcaggatta tgtaagatgt aatcaacgag atattcataa tgagtactta
     1261 ttcggattat atgatgcttt ggatagaggt gatcattatg ggtctgaagt tggttcaaga
     1321 actattttgc cagcatcatt tacaggaggc cctaggtaca tgtatattca ttacttagat
     1381 gcgttagcca tttgtcgtgt ttatggaaat cctagattct ttatcacttt tacctgtaat
     1441 tccaaatggc cagagattaa aagatatctc cagaaatatt ctcacctatc tgctaatgat
     1501 cgtgccgaca taatttcaag agtttttcat atgaaagtca cgctatatgt cgctatttta
     1561 aaggaagaag agttactcgg ttcgtggaga ggagtgcgtt tttaa
//
LOCUS       XM_071831854             573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841645), mRNA.
ACCESSION   XM_071831854
VERSION     XM_071831854.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..573
                     /gene="LOC139841645"
                     /note="uncharacterized LOC139841645; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841645"
     CDS             1..573
                     /gene="LOC139841645"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687955.1"
                     /db_xref="GeneID:139841645"
                     /translation="MEIDYHALRARGKIVLALASSGIASLILPSERTAHSQFKFPLDL
                     TDESMCNIKKNTQMAKLIESTDLIIWDEAPMNDKSCFKALDKSLREIRDNNEAPFRGK
                     SLILEGDFKQTLPVKKNGSKSEILAACITTSYMWRGFKVFVLTQNMRLVQPGLSASEK
                     ARNEELSRWILSLGNGHVGTPDLEDQHNSR"
     misc_feature    19..>546
                     /gene="LOC139841645"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atggaaatcg attatcacgc attaagagca agagggaaga ttgtactggc cttggcatcg
       61 tccggtattg cttctctgat acttccttca gaaagaaccg ctcattctca gttcaaattt
      121 ccgctggact tgaccgatga atccatgtgt aatataaaga aaaatactca gatggcgaaa
      181 ctgatcgaga gtacagatct aattatttgg gatgaggcac caatgaacga caaaagctgc
      241 ttcaaagctc tggacaagag cctaagagag attcgggaca acaacgaagc accttttagg
      301 ggcaagtctt taattctcga gggtgatttt aaacagacgt taccggtaaa gaaaaatgga
      361 agtaaatctg agatattagc agcttgcatc acaacttcgt atatgtggcg aggcttcaaa
      421 gtgtttgttc taacacaaaa tatgaggtta gtgcagccag gtctgtcggc atctgaaaag
      481 gcgagaaatg aggaattgtc aaggtggata ttaagtttgg gcaatggtca tgtaggaacg
      541 cctgatttgg aggaccaaca taatagccgt tag
//
LOCUS       XM_071831855             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841646), mRNA.
ACCESSION   XM_071831855
VERSION     XM_071831855.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139841646"
                     /note="uncharacterized LOC139841646; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139841646"
     CDS             1..627
                     /gene="LOC139841646"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687956.1"
                     /db_xref="GeneID:139841646"
                     /translation="MVDGRVTTCNSNDTATLRGNDCGESELIYPKKYLNTLKYPGLPS
                     HVLDLKVGVPTILLCNINVSAGLCNGTRMIITQLLSKSVEAETITGTRVGEKVFFPRM
                     KLIHKEPSLPFLLKRQQFLLKVLYAMTSNKSQGQSLNKIGFYLRKTISPHGQLYVVLA
                     RATSPEGLKVLIKQQEDHGPNVTNNVVYTDFLSSILDFEPAPTGHISR"
     misc_feature    <1..234
                     /gene="LOC139841646"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <376..504
                     /gene="LOC139841646"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    481..483
                     /gene="LOC139841646"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggttgatg gccgggtgac aacctgcaac agtaatgaca ctgcaacact gcgtggaaat
       61 gactgcggtg agtcagaact gatatatcca aagaaatacc taaacacgct caaatatcct
      121 ggcctcccat cacacgtcct agatttaaaa gtaggggtac caaccattct gttatgtaat
      181 ataaatgttt ctgctgggct ctgtaatggt acaaggatga ttattactca actgctaagt
      241 aaatcggttg aggctgaaac aatcacgggc acgcgcgttg gtgagaaagt cttcttccca
      301 agaatgaaac ttatccacaa agaaccatca ctaccatttc ttctaaaaag acaacagttt
      361 ctgttaaaag ttttgtatgc catgacctca aacaaaagtc aaggtcaatc actcaacaag
      421 ataggttttt atttaagaaa aaccatatcc cctcacgggc aattatatgt cgtactcgca
      481 agagctacat caccagaagg tttaaaagtt ttgatcaaac aacaagaaga tcacgggcct
      541 aatgtaacaa acaatgtcgt ctatacagat ttcctatcct caattcttga ctttgagcca
      601 gcaccaactg gccatattag ccgttaa
//
LOCUS       XM_071831856             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841647), mRNA.
ACCESSION   XM_071831856
VERSION     XM_071831856.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139841647"
                     /note="uncharacterized LOC139841647; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139841647"
     CDS             1..627
                     /gene="LOC139841647"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687957.1"
                     /db_xref="GeneID:139841647"
                     /translation="MVDGRVTTCNSYDTATLHGNDCGESELLYPKKYLNTLKYPGLPS
                     HVQDLKVGVPAILLCNINVFAGLCNGIRMIITQLLSKSVEAETITGTRVGEKVFFPRM
                     KLIHKEPSLPFLLKRQQFLLKVLYDMTTNKSQGQSLNKIGFYLPKTISPHGQLNVVLS
                     RSTSPEGLKVLIKQQEDHGPNVTKNVVYTDFLSSIPEFEPTPTCHISR"
     misc_feature    <1..234
                     /gene="LOC139841647"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atggttgatg gccgggtgac aacctgcaac agttatgaca ctgcaacact gcatggaaat
       61 gactgtggtg agtcagaact gctatatcca aagaaatacc taaacacgct caaatatcct
      121 ggcctcccat cacacgtcca agatttaaaa gtaggggtac cagccattct gttatgtaat
      181 ataaatgttt ttgctgggct ttgtaatggt ataaggatga ttattactca actgctaagt
      241 aaatcggttg aggctgaaac aatcacgggc acgcgcgttg gtgagaaagt cttcttccca
      301 agaatgaaac ttatccacaa agaaccgtca ctaccatttc ttctaaaaag acaacagttt
      361 ctattaaaag ttttgtatga catgaccaca aacaaaagtc aaggtcaatc actcaacaag
      421 ataggttttt atttaccaaa aaccatctcc cctcacgggc aattaaatgt cgtactctca
      481 agatctacat caccagaagg tttaaaagtt ttgattaaac aacaagaaga tcacgggcct
      541 aatgtaacaa agaatgttgt ctatacagat ttcctatcct caattcctga atttgagcca
      601 acaccaactt gccatattag ccgttaa
//
LOCUS       XM_071831857            2613 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841648), mRNA.
ACCESSION   XM_071831857
VERSION     XM_071831857.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2613
                     /gene="LOC139841648"
                     /note="uncharacterized LOC139841648; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841648"
     CDS             1..2613
                     /gene="LOC139841648"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687958.1"
                     /db_xref="GeneID:139841648"
                     /translation="MDSVDEFITVAETDQLEKGNTAISYPCKKCKNARWYADSTDIKS
                     HLIAHGFMRGYTCWSFHGESLADLNPSVSDNDTDNEDDSYNSDNNVNFDDMFDDLDME
                     DNVADKYHDILQQLFVDAEKPLYTGCMNFSKLSAVIQLVNLKSNNGWSDTSFTSLLEL
                     LNKMLPEGNELPVSTCQAKKLMYKRGKPTDNVDSDVSENGPPAKLLWYLPIIPRLKRL
                     FVNEKDAKLLRWHAEDRKNDGKMRHLADSLQWKNFDKDFEEFGDEIRNIRFGLSSDGI
                     NPFGDLSSRHSTWPILLCIYNLPPWVCMKRKYIMMSLLIQGPKKPGNDIDVYLQPLVD
                     EIMELWSTSIHVYDAYKKEYFQLRAMLFCTINDFPAYGNFSGYSTKGKKACPICEENT
                     HSIWLTNCKKPAFMGHRRELAENHPYCKKANLFDGLLLNIPGKTKDGIKVRRDMELMN
                     IRPELQPKDIDGRSTKFLPPACYTMLKVEKTKFCQCLHGIKVPSGYSANIRKLVSMKD
                     FKLLVIDPDVLDEYQRDIILTLCELEMYFPPSFFDVMVHLASHIVGEIKACGPVFLRY
                     MYPFERYMGILKGYVRNLNRPEGSIVEGYASEKVIKFCTNYMDGFKSVGIPQSHHEGR
                     QAGQGTLGRKTGYSNVADYQEAHFNVLQHTTSIDPFIQEHMAFLRQQNPKKSAKWLAN
                     QHKITFSEWLKDKVRRTLPNIDKTVEALGFAPKHVFQYQGYDINGYTLYTKAQDKKKI
                     WELDYGDSYTIPLFKCKWVDNDRGVQVDEDGFATVNLSTNGYKEEPFILEKLVTQVFF
                     IEDPKDPRWHVVQYGKRRIIGVKNVVDEDEYDQFDELPPFSVGVQPMNEVVVGNNTIY
                     FREDHQEGDEVADT"
     misc_feature    <10..189
                     /gene="LOC139841648"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    712..1281
                     /gene="LOC139841648"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1537..1842
                     /gene="LOC139841648"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2221..2430
                     /gene="LOC139841648"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atggatagtg tagatgaatt tattacagtt gccgagactg atcaactaga aaaaggaaac
       61 accgcaatta gttatccttg taagaaatgc aaaaatgcac ggtggtatgc tgattcaact
      121 gatatcaaaa gtcatctaat tgcacacgga tttatgagag ggtacacatg ttggtctttt
      181 catggtgagt cattagctga ccttaaccct tctgtttcgg ataacgatac cgacaatgaa
      241 gacgattcat acaatagtga caataatgtt aattttgatg acatgtttga cgatttggat
      301 atggaggata atgttgctga taagtatcat gacatattac aacaactatt tgttgacgct
      361 gaaaaacctt tatataccgg ttgtatgaat ttttcaaaac tttcggccgt gatacaactg
      421 gttaatttaa aatcaaacaa tggttggagc gacacaagtt tcactagcct gttagagttg
      481 ttgaacaaaa tgctaccaga aggtaatgag ttgccagttt caacatgcca agcaaagaaa
      541 ttaatgtata aacgtggaaa accgactgat aatgttgata gtgatgtgtc agaaaatgga
      601 cctcctgcaa aattattgtg gtatttgcct atcataccaa gattaaagag attatttgtg
      661 aatgagaaag atgcaaaatt attacgttgg catgctgaag atcgtaaaaa tgatggtaaa
      721 atgcgacatt tggccgattc acttcaatgg aagaattttg ataaagattt tgaagaattt
      781 ggggatgaga tacgtaatat aaggttcgga ctcagttcag atggaattaa tccgttcgga
      841 gatttgagta gccgtcacag cacgtggcct attcttctat gcatttataa cctaccacct
      901 tgggtatgta tgaaaagaaa atacataatg atgtctcttt tgattcaagg cccaaagaaa
      961 cctggaaatg acattgatgt ttatttgcaa ccattagttg atgaaattat ggaattatgg
     1021 agtaccagca tacacgttta tgatgcatac aagaaagaat acttccaact acgggcaatg
     1081 cttttttgca ccattaatga ttttcctgct tatggtaatt tttctggata tagtacaaag
     1141 ggaaaaaagg catgtcctat ttgtgaggaa aatactcact cgatatggct cacaaattgt
     1201 aagaaaccgg catttatggg gcatcggaga gagcttgctg agaatcaccc gtattgtaaa
     1261 aaggcgaatt tatttgatgg gttactgttg aacattcctg gaaaaacaaa agatggaatt
     1321 aaagttagaa gggacatgga attaatgaat atcagaccag agctacaacc taaagatatt
     1381 gatggaaggt ccaccaagtt tcttcctccg gcctgttata ctatgttgaa ggtcgagaaa
     1441 actaaatttt gtcaatgctt acatggtatt aaggttccat caggatactc ggctaacatt
     1501 aggaagttag tttcgatgaa agattttaag ttacttgtga ttgatcctga tgtgctggat
     1561 gaatatcaaa gagatatcat acttactctt tgcgaactcg agatgtactt tccaccttct
     1621 ttctttgatg tcatggttca tttggcatct catattgtag gagaaataaa ggcatgtggt
     1681 ccagttttct tacggtatat gtatccattt gaaagatata tgggtatctt gaaaggttat
     1741 gtaaggaacc ttaatcgacc agaaggcagt atcgttgaag gatatgcatc cgaaaaggtg
     1801 atcaaattct gcacaaacta tatggatggg tttaaaagtg tcgggattcc acaaagtcat
     1861 catgaaggaa gacaagcagg tcaagggaca cttgggcgca agacgggcta ttcaaatgtt
     1921 gccgattatc aagaggctca ttttaatgtc ttacaacaca ctacatctat tgatccgttc
     1981 atacaagaac acatggcatt cttgagacaa caaaacccta aaaagagtgc aaagtggttg
     2041 gcaaatcaac ataaaataac tttttcagaa tggttgaaag ataaagttag gaggacactt
     2101 ccaaatattg ataaaacggt cgaagctttg ggattcgccc cgaaacatgt gttccaatat
     2161 caaggatatg acataaatgg gtataccctt tacacaaaag ctcaagacaa gaagaaaata
     2221 tgggaattag attatggtga ttcgtacact atacccttgt tcaagtgtaa gtgggttgat
     2281 aatgaccgcg gtgttcaagt tgatgaagat ggttttgcaa ctgttaatct ttccaccaat
     2341 ggatataaag aagaaccatt cattctagaa aaactagtta ctcaagtatt ctttatcgaa
     2401 gacccaaagg atcctagatg gcatgtggtt cagtatggaa aacgacggat tattggtgtc
     2461 aagaacgttg ttgatgagga tgagtacgac caatttgacg agttgccgcc attttcagtc
     2521 ggtgttcaac ctatgaatga agttgttgtt ggaaataata caatctactt tagagaagac
     2581 catcaggaag gagacgaggt tgcagacaca taa
//
LOCUS       XM_071831858            1470 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841649), mRNA.
ACCESSION   XM_071831858
VERSION     XM_071831858.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1470
                     /gene="LOC139841649"
                     /note="uncharacterized LOC139841649; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841649"
     CDS             1..1470
                     /gene="LOC139841649"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687959.1"
                     /db_xref="GeneID:139841649"
                     /translation="MGGGNKNAKNQGRSDSPVSPGFQTPTATVMNTPPTPPGPVKGTS
                     KPPSTSNVKTGPVASETVLKESSKNLWHSPDLPPKILSFGTARTHNWGDAVACHILPI
                     VLQGVAREWFHNFPSQSVTGFTDLRSWFLLNFHNLRARKRTHIECHDIKQKPKESLGE
                     IIDRYTKEVAKIQDLPESQKVSDFIHCKDTERHLSLWQWLRRRVPDTFAEAIKETHDY
                     MRAQEDIKQNCGNSSSSMDIDDNNYRVQGRGSESGKRYGSNGPSRGDLTKTPKEILAT
                     EAVVTELNRGRFQHLKKGGKTSSEKSKGEKEYPWQRKNDEKETEKTINMVISGRANQR
                     IKLDLPEEWENTPILFSAIAKGPSDAPITIKGRVKGCGYIIKQLHIDTGCGVDIMYEH
                     CFQLLPGAVRAKLIAPSATISGFSGESAWPIGIIESELELVDDDNKELVRRCTTVQKL
                     AAIPFMVHGLIKFPTPLGIATIRLETQDVNIAAVEQAEK"
     misc_feature    292..558
                     /gene="LOC139841649"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atgggtggag gaaacaagaa tgccaaaaat caggggcgat cggattctcc ggttagtcca
       61 gggtttcaaa cacctacagc gactgttatg aatacaccac cgacgccacc tggaccagtt
      121 aaaggcacat caaagcctcc atcgacatcg aacgtcaaaa caggaccagt tgcatcagaa
      181 acagtcctaa aagaatcatc taagaatttg tggcactctc ccgatttgcc cccaaaaatt
      241 ctgagcttcg gaactgcaag aacacacaac tggggtgatg cagtagcatg ccatattcta
      301 ccaatagtgc tgcaaggagt agcaagggaa tggttccata actttccatc ccaaagcgtt
      361 acaggtttta cggatttgcg ctcatggttt ctattaaatt ttcacaatct acgcgcccgc
      421 aaaagaacac atatcgaatg tcatgacatt aagcagaaac caaaagaaag tttgggagaa
      481 atcattgata ggtacaccaa ggaggtggcc aaaatacaag acctgccaga aagtcagaag
      541 gtgtccgact ttatacattg caaagacaca gaaagacatc tatctttgtg gcagtggtta
      601 cgcagaagag tgccagatac cttcgcagaa gctataaaag aaacgcatga ttatatgcgc
      661 gcgcaagaag acataaagca aaattgtgga aattcctctt caagcatgga tattgatgac
      721 aataattatc gcgtgcaagg aagaggatca gaatctggca agcgatatgg tagtaatggg
      781 ccatcccgag gtgacctaac gaaaacacca aaagaaatat tggctacgga ggcagtagtc
      841 actgaactca atagaggaag attccaacac ttgaagaaag gtggaaaaac atcaagtgag
      901 aagtcaaaag gagaaaaaga gtatccatgg caaagaaaga atgatgaaaa ggaaacagaa
      961 aaaactatta acatggtcat cagcggacga gcaaatcaga gaatcaaatt agatttgcca
     1021 gaggaatggg aaaacactcc catcctattt tcggccatag cgaaaggacc atcagatgcg
     1081 cctatcacaa ttaaagggcg cgttaaaggc tgtggctaca tcataaagca attgcacata
     1141 gacactggtt gcggcgttga tataatgtac gaacattgct ttcagttgct acccggagcg
     1201 gtacgagcta aactaatagc tcccagcgct acaatatcag ggttttctgg ggagtccgca
     1261 tggccaattg ggatcatcga gtcggaatta gagttggtag atgatgataa taaggagtta
     1321 gtaagaagat gcacaactgt gcaaaagttg gcagctattc ctttcatggt gcatggtctt
     1381 ataaagttcc caactccatt aggaatcgcg acgataagat tagaaacaca agatgtaaac
     1441 attgcggctg tagaacaagc cgaaaaatag
//
LOCUS       XM_071831859             633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841650), mRNA.
ACCESSION   XM_071831859
VERSION     XM_071831859.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..633
                     /gene="LOC139841650"
                     /note="uncharacterized LOC139841650; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841650"
     CDS             1..633
                     /gene="LOC139841650"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687960.1"
                     /db_xref="GeneID:139841650"
                     /translation="MEMMKQVHVNMPLIQVLKDMPNYGKFIKNILSSKVIYEEMSVTF
                     LVEECSAILQKQKMPLKLGDPGCFIIPCNMGGSEVYDALVDLGASVNLMPYSIYKKLN
                     LGELKATWIVLKMGNQTFDTPIDIAEDLVVKVGNLTFSADFVILEMNEDEHVPIILRG
                     PFLNTDDTIVYVQQNKLSIGVKYERLDFMCVKLITNQICQMLSLFVKSRS"
     misc_feature    208..492
                     /gene="LOC139841650"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(253..255,259..261,265..267,337..345,469..471)
                     /gene="LOC139841650"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    253..261
                     /gene="LOC139841650"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    253..255
                     /gene="LOC139841650"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(337..348,358..369)
                     /gene="LOC139841650"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggaaatga tgaaacaagt tcatgtcaac atgccactca tccaagtgct taaggacatg
       61 cctaattatg ggaagttcat taaaaatatt ttatcttcaa aagtcatata tgaggagatg
      121 tcagttacat ttctcgtaga ggaatgttca gctatcttgc aaaagcaaaa gatgcctctt
      181 aaattgggtg atccgggttg ttttataatc ccatgcaata tgggcgggtc agaagtgtat
      241 gatgcacttg tggacttagg ggctagtgta aatcttatgc cctattcaat ttataaaaag
      301 ctaaatcttg gggaactaaa agcaacctgg atagtattaa aaatggggaa ccaaacgttt
      361 gatacaccaa tcgacatagc cgaagacctt gtggtcaaag ttggtaattt aactttttcg
      421 gccgatttcg tgatcctcga aatgaacgag gatgaacatg tcccaataat tttgagagga
      481 ccttttctaa acaccgatga tacaattgtt tacgtgcaac aaaataaatt aagtatcggg
      541 gtgaaatacg aaagacttga ttttatgtgc gtgaagttga taacaaacca aatttgtcaa
      601 atgttgagtc tttttgtcaa atcgaggtca tga
//
LOCUS       XR_011757415             825 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841651), transcript variant X1, ncRNA.
ACCESSION   XR_011757415
VERSION     XR_011757415.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..825
                     /gene="LOC139841651"
                     /note="uncharacterized LOC139841651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841651"
     ncRNA           1..825
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841651"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139841651"
ORIGIN      
        1 ttgtagtgtt atttgttttt cagacagggg aattggagta ttagttgttt gatttaaact
       61 ggaaagtgga attggagtaa ttgttgtggc tacttgaagc agttagttgt ttttagttac
      121 tgtttttctt aactctattg tgccatttga tgtgtgatgt ttcattggta atacttttaa
      181 ttagactcat ttactgaatc gttattatat atgaatactg ctcttaacga ttgatgacca
      241 ggtacgtatc taatttaccc tcgctttgat tagaaagacg ataaccattg ttattaatgt
      301 actatagtag atgaaagtga tatttttgca ctttgtattc aacggctttt tgcattcctt
      361 tttatttatt tgactaattt ggtagcccat tgtgtgtatt caattaaact agcgttttgt
      421 tcattgctat tgtaaatcta tatgattaat ttttagttgc aaagtgagtc aacatggccg
      481 tcgaaataca tacagtagtt attgcaaata actgaacgtt gattacgcac aatataccga
      541 actactttgt cccattttat gaataggcat aaataaataa ttacatttca gtgcacttaa
      601 gagttattaa aagttgagca gagtataaca tttttggttt ggttttcaaa tttcaggtta
      661 ttggtaacaa agatatactt caggtgttca tggattctta ttatgagaac atgacttttc
      721 agaagtggag caaaggaaag gaagatgtca acaacatgat gactacgatg agcatatgtg
      781 ctggagctgc tgccgcaact gctgctgttg tttttttttt ttttt
//
LOCUS       XR_011757416            1220 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841651), transcript variant X2, ncRNA.
ACCESSION   XR_011757416
VERSION     XR_011757416.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1220
                     /gene="LOC139841651"
                     /note="uncharacterized LOC139841651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841651"
     ncRNA           1..1220
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841651"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139841651"
ORIGIN      
        1 ttaaaaccca atgacaaaca aatcacccga cccgttcccg tactggctct ttaaccctcc
       61 tactgaaacc ctatacccca aaaaaccata ctttcattct tttctgccat tgaaggagac
      121 accctctagg gtttgaggtc atctttctca aatcattccc gaggtccagt gttgttgttc
      181 ataggtggtt ggcatggttg attttggcag gtcgattgtc tctgttacct ttcataatgg
      241 atcgatcgtt ggcatggttg atttgggctg gtcgatggtc tgttacctct gatagtggtt
      301 tattagggtt tccttcttac tgtatcggtt gatgtctgtt gccaagggtt taggccgtcg
      361 gatttctatt ccgttttttt cttcttactg tttcagttaa tggttcatgc catggttgac
      421 aggggaattg gagtattagt tgtttgattt aaactggaaa gtggaattgg agtaattgtt
      481 gtggctactt gaagcagtta gttgttttta gttactgttt ttcttaactc tattgtgcca
      541 tttgatgtgt gatgtttcat tggtaatact tttaattaga ctcatttact gaatcgttat
      601 tatatatgaa tactgctctt aacgattgat gaccaggtac gtatctaatt taccctcgct
      661 ttgattagaa agacgataac cattgttatt aatgtactat agtagatgaa agtgatattt
      721 ttgcactttg tattcaacgg ctttttgcat tcctttttat ttatttgact aatttggtag
      781 cccattgtgt gtattcaatt aaactagcgt tttgttcatt gctattgtaa atctatatga
      841 ttaattttta gttgcaaagt gagtcaacat ggccgtcgaa atacatacag tagttattgc
      901 aaataactga acgttgatta cgcacaatat accgaactac tttgtcccat tttatgaata
      961 ggcataaata aataattaca tttcagtgca cttaagagtt attaaaagtt gagcagagta
     1021 taacattttt ggtttggttt tcaaatttca ggttattggt aacaaagata tacttcaggt
     1081 gttcatggat tcttattatg agaacatgac ttttcagaag tggagcaaag gaaaggaaga
     1141 tgtcaacaac atgatgacta cgatgagcat atgtgctgga gctgctgccg caactgctgc
     1201 tgttgttttt tttttttttt
//
LOCUS       XM_071831860             349 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ACTIVITY OF BC1
            COMPLEX KINASE 8, chloroplastic-like (LOC139841652), mRNA.
ACCESSION   XM_071831860
VERSION     XM_071831860.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..349
                     /gene="LOC139841652"
                     /note="protein ACTIVITY OF BC1 COMPLEX KINASE 8,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:139841652"
     CDS             110..349
                     /gene="LOC139841652"
                     /codon_start=1
                     /product="protein ACTIVITY OF BC1 COMPLEX KINASE 8,
                     chloroplastic-like"
                     /protein_id="XP_071687961.1"
                     /db_xref="GeneID:139841652"
                     /translation="MRVTAENLQKLDPKSDGAKRDWVAIYDECANVLYQVLTMEYVPE
                     IKISRIQALDQLGVDRKKVMAETNTGSVGISNIYM"
     misc_feature    <122..>301
                     /gene="LOC139841652"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    <215..>304
                     /gene="LOC139841652"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; Region:
                     AarF; COG0661"
                     /db_xref="CDD:440425"
ORIGIN      
        1 tgctgccaat cttggccaag tacatcgagc aagattgaag ggccaagaat tagttattaa
       61 agttcaaaga ccgggtctca aggatctttt cgatattgat cttaaaaata tgagggtaac
      121 agcagaaaat cttcagaaac ttgacccaaa gtctgatggt gcaaaaaggg attgggttgc
      181 tatctatgat gagtgtgcta atgttttgta tcaggttctt acgatggagt acgtcccaga
      241 aatcaagatt agcaggatac aagctttaga tcaattaggt gttgatcgca aaaaggtaat
      301 ggcagaaacg aatacggggt ctgtcggtat ctctaacatt tatatgtaa
//
LOCUS       XM_071831861             690 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841653), mRNA.
ACCESSION   XM_071831861
VERSION     XM_071831861.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..690
                     /gene="LOC139841653"
                     /note="uncharacterized LOC139841653; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841653"
     CDS             1..690
                     /gene="LOC139841653"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687962.1"
                     /db_xref="GeneID:139841653"
                     /translation="MSVISAARTGPGGVKFLVVAIDYFTKWVEAKPLKTISGSCTPQA
                     NGQCEVTNRDIVLDIKARLGLCQRGWIDELPNVLWAHCTTPKSTTNETPFSLVYGSEA
                     VIPAEINVPTMRIASFDESSNSEELRENLNLVKERREMAAIKEAINLQRIASYYNKRI
                     QPLSFQLDDLVWRKNEASRAEDTGKLGPKWEGPYKVIGVSDTGAYRLASLEEKAIKRT
                     WPAQTLKWCYI"
ORIGIN      
        1 atgtcagtca tatcagctgc acgcaccgga ccaggagggg taaagttttt ggtcgtagcc
       61 attgattatt ttacaaaatg ggtagaagcc aaaccgctga aaacaatttc aggcagttgc
      121 acaccccagg caaacggcca gtgtgaggta acaaatcgag atatcgtgtt agatatcaaa
      181 gcaagacttg ggttgtgcca aaggggttgg atagatgaac taccaaatgt gttgtgggca
      241 cattgcacga ccccaaaaag cacgactaat gaaacacctt tcagtttggt gtacgggtcc
      301 gaggctgtaa tacccgcgga gataaatgta ccaacaatgc gcatagcttc cttcgatgaa
      361 agtagcaata gtgaggaact gcgtgaaaat ctaaatttgg ttaaagagcg tagagaaatg
      421 gcggccataa aagaagcaat caacttgcaa agaatcgcaa gctactataa caagcgcata
      481 caaccattat ctttccaatt ggatgatttg gtatggagaa aaaatgaagc aagcagagcg
      541 gaggatacgg gtaaacttgg acctaaatgg gaaggaccat acaaggttat tggtgtaagc
      601 gatacagggg cgtatcgttt agcaagttta gaagaaaaag caataaaacg cacctggccg
      661 gcacaaacac tcaaatggtg ctacatatga
//
LOCUS       XM_071831862            2016 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841654), mRNA.
ACCESSION   XM_071831862
VERSION     XM_071831862.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2016
                     /gene="LOC139841654"
                     /note="uncharacterized LOC139841654; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841654"
     CDS             1..2016
                     /gene="LOC139841654"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687963.1"
                     /db_xref="GeneID:139841654"
                     /translation="MVMVEGSPSSGSKLMVVLDEDRGCGWPKFIIWRHKLVADGGHWW
                     RMVVDGGCQWFGKIDTRRSYDFLRSCPSSSGAGRSIGPRSGNRLARLGRIRVGSWNVG
                     TLTGKWYELVETLRECKVDILCVQETRWKGRGAARINDYKLWFSGSRVARNGVGIIIG
                     PPYNEYVVDVGRQSDRIMSVRLVIQEVTYTVICAYAPHAGRGDAEKRHFWESLDGVVR
                     MCPPDHRLLIGGDLNGHIGSDVEGYAGVHGGFGYGARNEEGLSILEFAVAHDLAVVNS
                     FFKKRDAQLATFHSGGHSTQIDYMLIRKGDLRTCGDCKVPTALTCSSQHRLLVMDLVL
                     QRRTTKSVRQVQPKILWKNLNGEKAETFKTSVVGRVDAELEMVSNDDAHQLWNCLASS
                     IREVAKETLGVALGTSRDHRAVRESWWFSDEVQSKVALKQLRFRELITGGEGTPTDRI
                     RAVERYKEAKREAKKAVALAKENSYEDLYKKLDSKEGANDIYKIAKARERRRMDLDNI
                     KFIKNEDGQTLVKEDEIRKIWEEYFSSLFVGGRPERHEDLQDADIEQCHNNIDCERIS
                     EEEVRLALRKMGRNKSVGPDQIPIEAWRCLGDTGVRWLTFLFNKTFRSSKMTMEWRLS
                     ETIPIYKNKGDAQCCGLKTDKSCRKMDEAADMRPGTRRLGEEIPEYS"
     misc_feature    286..996
                     /gene="LOC139841654"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(298..300,379..381,583..585,691..693,697..699,
                     892..894,970..975)
                     /gene="LOC139841654"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(379..381,970..972)
                     /gene="LOC139841654"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(583..585,697..699,973..975)
                     /gene="LOC139841654"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atggtgatgg tggaagggag ccctagcagt ggtagtaagt tgatggtggt tctagacgaa
       61 gatcgtggtt gtggttggcc gaagtttatt atttggcggc ataagctggt ggctgacgga
      121 ggtcattggt ggcggatggt ggttgatggt gggtgtcaat ggtttggtaa gatagacact
      181 agacgttctt atgatttctt gaggtcatgt ccttctagtt caggggcggg taggtctatt
      241 gggcctagaa gcggcaatag gttagcgagg ttgggtagga ttagagtggg tagttggaat
      301 gtgggaactt tgaccggcaa atggtatgaa ctggtcgaga ctttacgtga atgcaaagtg
      361 gacattttgt gcgtccaaga gactagatgg aaaggtcgag gggcggctag gatcaatgac
      421 tacaagttgt ggttctcggg atcgagagta gctaggaatg gggttggaat cattattggc
      481 ccaccctaca acgagtatgt tgtggatgta ggtagacaga gcgacaggat tatgtcggtt
      541 aggttggtta ttcaggaggt gacttacact gtaatttgcg cttacgcacc ccatgcgggc
      601 cgtggagatg ctgaaaagag acacttctgg gaatcgttag atggggttgt gaggatgtgc
      661 cctccggacc acagattact tattggtgga gatctcaatg gccatatagg atctgatgtt
      721 gagggatatg cgggagtcca cgggggtttc gggtacggag ctagaaatga ggaaggactc
      781 tctattcttg aatttgctgt tgcccacgac ttggcagttg tgaattcgtt tttcaagaag
      841 agggatgctc agttagcaac ttttcatagc ggaggtcata gtacccagat tgactacatg
      901 ttaattcgca aaggggatct taggacttgt ggagactgta aggtcccgac tgccttgaca
      961 tgctcctccc agcacagact gttggtcatg gatttggttc tccagagacg gaccaccaag
     1021 agtgtgagac aagtccaacc taagatcttg tggaagaatt tgaacggaga gaaggcagag
     1081 acctttaaaa cctcggttgt aggtagagtg gatgctgaat tagaaatggt atccaatgat
     1141 gacgcgcatc aattgtggaa ttgtctagcg tcctccatta gagaggtagc caaggaaacc
     1201 ctaggtgtgg ctctaggtac atctagagac catagggctg ttagagaatc atggtggttc
     1261 agtgacgagg ttcaaagcaa agttgcgctt aagcaattaa ggtttaggga gctcatcact
     1321 ggtggggagg ggactccgac ggatagaatt agggctgtag agagatataa agaagccaaa
     1381 agagaagcta agaaggctgt agccctagca aaagaaaatt catatgaaga tctgtataag
     1441 aaacttgact ccaaagaggg agctaatgat atttacaaga tagccaaagc tagggagcga
     1501 agacgtatgg atcttgataa catcaagttt atcaaaaatg aagatggtca aactttagtt
     1561 aaggaagacg aaattaggaa aatatgggaa gagtatttct catctctctt tgtaggggga
     1621 agaccagagc gccacgagga cttacaagac gctgatatag aacaatgcca taacaacatc
     1681 gattgtgaga ggattagcga agaggaagta agattggcac tacgaaagat ggggagaaat
     1741 aaatcagtgg gaccggatca gatccctatt gaggcgtggc ggtgcctggg cgacactggt
     1801 gttaggtggc tgactttcct ttttaacaag acgtttcgaa gctctaaaat gactatggaa
     1861 tggagactga gtgagactat tcccatctat aagaacaagg gggatgctca atgttgcgga
     1921 ttaaaaacag ataaaagttg cagaaaaatg gatgaagccg ccgacatgag gcctggaacc
     1981 cgccggctag gtgaagaaat tccagaatat tcttga
//
LOCUS       XM_071831863            3426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841655), mRNA.
ACCESSION   XM_071831863
VERSION     XM_071831863.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3426
                     /gene="LOC139841655"
                     /note="uncharacterized LOC139841655; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841655"
     CDS             1..3426
                     /gene="LOC139841655"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687964.1"
                     /db_xref="GeneID:139841655"
                     /translation="MTLDKSWTTLVDRTTTEFWNGLNAFIESCKAFANSANKCRCPCK
                     DCDNLVFQTLDTMKRHIQMHGFTRFYKTWKYHGEQVVLPPQTERFVRIPPAVDQLHDL
                     ITDLRDVPMDTTHISNENEPTTTTHTPSSTYDELDKLDNTELYPGCTWMSSFSFLAKL
                     CHMKVTCKWTNTSFDKLVTLLKTAFPDASIPSSYYEARKTMRTIGLGYESIHVCKYDC
                     CLFWKEHANDENCHVCGESRWKDKNTTGKKVPHKVMRYFPLTPRLQRLYKSRFTANHM
                     TWHASGQCTEAGKMHHPVDGTAWKNFNAKYPDFASEPRNVRLGLAADGFNPFNDISST
                     YSMWPVVLTTYNLPPWMCMKESSFMLTLLIPGPRSPGKDMDVFLRPLVDELKVLWSVG
                     VKTNDAATNTSFTMRAMLLWTINDFPARSSLSGWSGQGYKACPTCNVDTPSRPVLSKI
                     VYFGHRMFLKRNHKLRTSTSFDGHVEKRLPPRTRNKDEILAQLTTVKDRIKGKHPEFG
                     GKKRKRDPTVVGNWSKKSIFYELDYWSDLELKHNLDVMHIEKNVCEGLLNILLMHKEK
                     SKDNNKAREVLEMWGIRKELWLKPLGNGKSKKPHPKYSFKPDDRSQFCQFIKKVKLPD
                     GFGSNFKHKVHEDENKLVGLKSHDHHIMMQRLLPIGVRAYLDKSISAPIIELCLFFKQ
                     LCARSLLTSDMVKAKDGLIKILCSFEQIFPPSFFDIMIHLVMHLPDEAIQGGPVNMRW
                     MYPFERYMKKLKNYVKNKAKPEGSIAEGYVADEALTYASRYIHSVETSFNKPDRNAEA
                     KLPKRDFYVFQSVCTPISKAKDTRLDTKLQAQLNWFVLNNSPEIDKYKEEFKVERPHE
                     ISDIETKFPRWFNDKIKLMRVNEKSKCSDELLALAHGPRHYYSYTGCIVNGVRFVVHD
                     RDLRRTTQNSGVSSRADSGGVYYGVVEEILELCYLFGCKVVLFRCKWFKTDKKGCVTK
                     DNITSIYTQSEWYTDQQYVLATQTNLVFYIDDLSNKKGDWKVVHEVHHRKHWDQSLIR
                     GDDEMDLIHGCSSSDFSLSTNLDDAEDLTRLDLSMGEPMIVDHTPSTSNATIDVYEDD
                     DEDDYEDDDDEDDVEEVLEDDTQNGIEIDSEDDLDDNATNSCEADTTFSDDSE"
     misc_feature    13..234
                     /gene="LOC139841655"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    862..1479
                     /gene="LOC139841655"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    2047..2382
                     /gene="LOC139841655"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2833..3045
                     /gene="LOC139841655"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgacgttag ataagagttg gactacttta gttgaccgca ctactactga attttggaat
       61 ggtcttaatg catttataga gagttgtaaa gcgtttgcga attcagctaa taaatgtaga
      121 tgtccatgca aggattgtga caaccttgta ttccaaacac tcgatacaat gaaacgtcac
      181 atacaaatgc atgggtttac ccgattttat aagacttgga agtatcacgg tgaacaagtt
      241 gttttgccac cgcaaaccga acgttttgta cgtatacctc cagcggtaga ccaattacat
      301 gatcttatca ccgatcttcg tgatgtgcca atggacacca cacacatatc gaatgagaat
      361 gagccaacga ccacaacaca tacaccgagt tctacgtatg atgaattaga taaactagac
      421 aataccgagc tataccctgg ttgtacatgg atgtcttcgt ttagtttttt ggcaaagttg
      481 tgtcacatga aggtcacttg taaatggact aatacatcat tcgacaaatt ggtaacattg
      541 cttaaaactg catttccgga tgctagtatc ccatcttcgt actatgaagc taggaagaca
      601 atgaggacta ttgggttagg atacgaatcg attcacgttt gtaagtacga ttgttgttta
      661 ttttggaaag aacacgcaaa cgatgaaaat tgtcatgtat gtggtgaaag tagatggaaa
      721 gataaaaaca caactgggaa gaaagttccc cacaaagtga tgcgttactt tccgttgact
      781 ccaagattac aaagactata taagtctagg tttactgcga accatatgac ttggcatgct
      841 tctgggcagt gtaccgaagc tggtaagatg catcacccgg tagacggtac agcgtggaaa
      901 aatttcaatg caaagtatcc agattttgcc agtgaaccta gaaatgttag attagggttg
      961 gctgctgatg gtttcaatcc atttaacgat ataagttcta cttacagtat gtggccagtt
     1021 gtattgacaa catacaattt gcccccctgg atgtgtatga aagagtcttc attcatgttg
     1081 acgttgttaa ttcctggccc tagatctccc gggaaggaca tggatgtatt tttaaggccg
     1141 ttggttgatg agttgaaagt gttatggtct gtcggagtca aaacaaatga tgccgccaca
     1201 aatacctctt tcacaatgcg agccatgctt ttatggacca tcaacgattt tccagctcgt
     1261 agtagtttgt caggttggag cggccaagga tataaagcat gtcctacgtg taatgtcgat
     1321 actccatcta gacccgtgtt gtcgaaaatt gtttattttg gacatagaat gttcttaaaa
     1381 aggaatcata aattgagaac tagcacatca ttcgatggcc atgtcgagaa aaggcttccg
     1441 cctcgtacta gaaacaaaga tgagatatta gcacaattga cgacagtgaa agatcgtatt
     1501 aagggtaagc atcctgagtt tggaggtaag aagagaaaac gtgatccaac ggttgtgggt
     1561 aattggagta agaaatctat tttctacgag cttgattatt ggtcagatct tgaactaaaa
     1621 cacaacctgg atgtcatgca tatagaaaaa aatgtgtgcg aaggtttgtt aaatattttg
     1681 ctaatgcaca aggaaaaatc caaagacaat aacaaggcac gggaagtgct agaaatgtgg
     1741 ggcattcgaa aagagttgtg gctaaaacca cttggtaatg gtaagtcaaa aaaacctcat
     1801 cctaagtact ctttcaaacc cgacgataga agtcaatttt gtcaattcat caaaaaagtt
     1861 aagttacctg atggctttgg ctcaaacttt aagcataaag ttcacgaaga tgaaaacaaa
     1921 ctagttgggc tcaagtctca tgaccatcat ataatgatgc aacggttact ccccattggt
     1981 gttcgagcgt acttagacaa aagtatttca gcaccaataa ttgaactttg tttattcttt
     2041 aagcagcttt gtgctcggag cttgttgacg tctgacatgg taaaagcaaa agatgggttg
     2101 atcaaaatat tgtgttcttt tgagcaaata tttcctccgt ccttttttga cataatgatt
     2161 catttagtta tgcatttacc cgatgaggcg attcaaggtg gcccggttaa catgaggtgg
     2221 atgtatccat ttgaaagata catgaaaaaa ctgaagaatt atgtcaagaa taaagctaag
     2281 ccggaaggtt ctattgccga ggggtatgtt gcggacgaag ccttaactta cgcctcaagg
     2341 tatattcact ctgtagagac gagttttaat aagccagata gaaatgcaga ggctaaattg
     2401 cccaaacgtg acttttatgt gttccaatct gtgtgtacac ctattagtaa ggcgaaagat
     2461 actcggttgg atactaaact tcaggcccaa ctaaattggt ttgtacttaa caacagcccc
     2521 gagatcgaca aatacaagga agaatttaaa gtcgagaggc cgcatgagat tagtgatata
     2581 gaaaccaagt ttcctcgctg gtttaatgat aagatcaagc ttatgcgagt aaatgaaaaa
     2641 tccaaatgca gcgatgagtt acttgctttg gcacatggac cgagacacta ttactcatac
     2701 actggttgca tagttaacgg tgtaaggttt gtcgttcatg atcgagattt acgccgaaca
     2761 actcagaata gcggagtttc atcacgtgct gatagcggag gtgtgtatta tggcgtggtg
     2821 gaagaaattc ttgagctttg ttatctgttt ggttgcaagg ttgttttgtt tcgatgtaaa
     2881 tggtttaaaa ccgacaaaaa agggtgtgtc actaaggata acataaccag tatttatact
     2941 caatccgaat ggtatacaga tcagcaatat gtccttgcaa cacagacaaa tctagtattt
     3001 tacattgatg acctgagtaa taaaaaaggt gattggaagg tcgttcacga agtccatcat
     3061 cgaaagcatt gggaccaaag tcttatcagg ggagatgacg aaatggatct tatacatggt
     3121 tgctcttcgt ctgatttttc gttgtctact aacttggatg atgcggagga tttgactcga
     3181 ctagatttga gtatgggcga accgatgata gttgaccata ctccctcgac gagtaatgct
     3241 acaatagacg tttatgaaga cgatgatgaa gacgattatg aagacgacga tgatgaagac
     3301 gatgttgaag aggttctaga agacgacaca caaaacggca tagagatcga ctccgaggac
     3361 gacttagacg acaatgctac aaattcatgt gaagcagaca ctacttttag tgatgactcc
     3421 gaatga
//
LOCUS       XM_071831864             816 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841657), mRNA.
ACCESSION   XM_071831864
VERSION     XM_071831864.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..816
                     /gene="LOC139841657"
                     /note="uncharacterized LOC139841657; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841657"
     CDS             1..816
                     /gene="LOC139841657"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687965.1"
                     /db_xref="GeneID:139841657"
                     /translation="MPLRDKFKRLFQLEQNKDIMIKDRVSWQDGRCVFIWMWSREPRG
                     RTKSELVSLAELLNSHVGDSNNSDAWKWTMASNGVFTMKKLNQLIIGKVLEGEKSQPE
                     TKRNSLVPENVEVFICRTCKKSLLVLMELDKRGFDLHSVRCPICDDDIETINHALIFY
                     KIAYEVWSRVYKWWGLGPYVNVSINETFAGSLSQNYSELGMKIWQGVEWICGYVLWKN
                     RNLKIFKKIFLCIPSLVSEIQVLSFDYISHRLKDSKLDWCTWLLSPRSYLTIK"
     misc_feature    <316..498
                     /gene="LOC139841657"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcctctgc gtgataaatt caaaagactt tttcaattag aacaaaacaa agacataatg
       61 atcaaagata gagtttcttg gcaagacggc aggtgcgttt ttatttggat gtggtctaga
      121 gaacctaggg ggagaacaaa aagtgagtta gtttctttag ctgagctgtt gaattctcac
      181 gttggagatt caaacaatag tgatgcatgg aagtggacta tggcttcgaa tggggttttc
      241 acgatgaaaa agctcaatca attaatcatt ggaaaagtgc ttgaaggtga gaaatctcaa
      301 cccgaaacaa aaagaaattc gctagtacca gagaatgttg aggtattcat ttgtagaacg
      361 tgcaagaaaa gtttactggt tttaatggaa ttggacaaaa gaggctttga cttacactcg
      421 gtgagatgcc ctatttgtga cgacgacatt gagactatta atcacgcttt aattttctac
      481 aaaattgcat acgaagtgtg gtcaagagtt tataagtggt gggggttagg tccatatgtg
      541 aacgtgagta ttaatgaaac atttgcggga tcattgagtc aaaactattc ggaattagga
      601 atgaagattt ggcaaggtgt agagtggatt tgtgggtacg tattatggaa gaatagaaat
      661 ttgaagatct tcaagaaaat atttttgtgt attccatcgt tggtgagcga gattcaagtc
      721 ctaagttttg attatatttc acatcgttta aaagactcaa agcttgattg gtgtacatgg
      781 ttattgagtc cacgttcgta tctaacaatc aaataa
//
LOCUS       XM_071831865             819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841659), mRNA.
ACCESSION   XM_071831865
VERSION     XM_071831865.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..819
                     /gene="LOC139841659"
                     /note="uncharacterized LOC139841659; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841659"
     CDS             1..819
                     /gene="LOC139841659"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687966.1"
                     /db_xref="GeneID:139841659"
                     /translation="MQKYLKLLQESAMRFEHFKLAQVPMRQNKKADVLNKLVVLTFSH
                     FQKQVWVEELPHKSIDNDLMVVSVGEEQPNWMEPILQYIHNYVLPNDKCEARLVRERA
                     PMYIIQNNSLYRESYCGPMIQCVGPIEAEMIVDEVHNGSCALHSGYKIIAAKIMRMGY
                     FWPSLYRDVAKIVKRFKSCQRHAPQNRMPRHDMIPVNSSWPFHKWAIDIVGPFPAGEW
                     VLRNNDASRAEKLGKLGPNWEGPYQVVAINAAGSYKLTDIEGRNLPNVWHAALL"
     misc_feature    373..555
                     /gene="LOC139841659"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcaaaaat atttgaagtt gttgcaagaa tcagctatgc gatttgagca ttttaaactc
       61 gcacaagtac caatgaggca aaataagaaa gcagatgtgt taaataagtt ggttgtctta
      121 acattttcac actttcaaaa gcaagtttgg gttgaggagt tgccacacaa atccatagat
      181 aatgatctaa tggttgtgtc cgttggagaa gaacaaccaa actggatgga accaatttta
      241 cagtatatcc acaattatgt tttgccaaat gataaatgcg aagctcgttt agttcgtgag
      301 cgcgcaccaa tgtacatcat tcaaaataat agtttatatc gtgagtcata ttgtggccca
      361 atgatacagt gtgttggtcc aatcgaagcc gagatgatag tcgatgaagt acacaatggt
      421 tcttgcgcat tacattcagg ttataaaatc attgcggcca aaattatgcg gatgggttac
      481 ttttggccat ccttgtatcg cgatgtggca aagattgtta agcgtttcaa gagttgccaa
      541 cggcacgcgc cacagaatag gatgccaagg catgatatga tccctgttaa ttcgtcatgg
      601 ccatttcaca agtgggctat tgatattgta ggaccatttc ccgcaggtga atgggtactg
      661 cgaaacaatg atgcgagtcg agcagaaaaa cttggtaaac tgggacctaa ctgggagggt
      721 ccttatcaag ttgttgcaat taacgcggca ggatcatata aactcacaga catagaaggg
      781 cgaaatctcc ctaatgtgtg gcatgctgct ttgttatag
//
LOCUS       XM_071831866             684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841660), mRNA.
ACCESSION   XM_071831866
VERSION     XM_071831866.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139841660"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841660"
     CDS             1..684
                     /gene="LOC139841660"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071687967.1"
                     /db_xref="GeneID:139841660"
                     /translation="MSHGTILSNSQSPSTNDELRRMNGTPYASAIGSIMYPMLCTRPD
                     VSYALSMTSRYQQISGESHWMAVKNILKYLRRTKDMFLIYGGVEEDLTVKCYTDASFQ
                     TDRDDSRSQSGYVFILNEGAITWKSSKQKVVAQSTTEAEYIAASEAAQEAAWMKKFIA
                     DLGVMPSIEDPIEIFCDNNGAIAQAKEPRSHHSTKHILRRFHYIQHIVGDGDVCIRKV
                     HTTFMQHLY"
     misc_feature    280..669
                     /gene="LOC139841660"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(292..303,406..414,421..423,529..531,607..609)
                     /gene="LOC139841660"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtcacatg gtacaatatt gagcaattct caaagtccta gcacaaatga tgagcttaga
       61 cgaatgaatg gaactccata tgcttctgca attggatcca ttatgtatcc catgttatgc
      121 acaagaccag atgtatcgta tgctttgagc atgacgagta gataccaaca aatttcgggt
      181 gaaagccact ggatggctgt caagaacatc ctaaagtact tgagaaggac taaagatatg
      241 ttcttgattt atggtggtgt ggaagaagat cttactgtaa agtgctacac agatgctagc
      301 ttccaaactg atagagatga ttcacgatca caatctggat atgtctttat cttgaatgaa
      361 ggagctataa cttggaaaag ttctaaacag aaagtagttg cacaatctac tacagaagct
      421 gaatacattg ctgcatcaga ggcagcacaa gaggctgcgt ggatgaaaaa gttcattgct
      481 gatttagggg tgatgccaag catagaagac cccatagaaa tattttgcga caacaatggt
      541 gctattgctc aagcaaaaga acctagatcg catcacagca ccaaacatat ccttaggaga
      601 ttccactata tacaacacat agtgggagac ggagatgttt gtattcgcaa agttcacaca
      661 acatttatgc aacatttata ttaa
//
LOCUS       XM_071831867             876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841661), mRNA.
ACCESSION   XM_071831867
VERSION     XM_071831867.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..876
                     /gene="LOC139841661"
                     /note="uncharacterized LOC139841661; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841661"
     CDS             1..876
                     /gene="LOC139841661"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687968.1"
                     /db_xref="GeneID:139841661"
                     /translation="MQQPLEAKPPAGSGMVNLGQYLHGQKASLNAINRIRNILSTTEY
                     EDRKNPSTEKFQRLWDSLVNYNETHTAMMFYPKNRKTGLKAVFLPEASPLTISEYFVH
                     GLIDTLYIDGRTLHEIKEFPQKMQEAITRYRDNFAKDREIFLRIHSSYPIFNESLQLL
                     VPVFTIAYLGVSNGNYPTRDEAPQITPTIDHLVTSLAGVYFSSSKIGNGPEQQENIRI
                     NYINKNILIYSNTSEKIDEKGLNLIQKFEEPFEAFTGQLALLPEDMKRLLCRHISQAP
                     RHSCEYCSDNSTTME"
ORIGIN      
        1 atgcaacaac ctcttgaagc caaacctccg gcaggatcag gaatggttaa cctcggtcag
       61 tatttacacg gtcaaaaagc aagcctcaat gccataaata gaatacgaaa cattctctct
      121 acaacagaat atgaagacag aaaaaatcca tcaacagaaa aattccaaag gctatgggat
      181 agccttgtaa attacaacga aactcataca gcaatgatgt tttatcccaa aaataggaaa
      241 actggcctca aagcagtttt tctaccagaa gcatcaccat taacaatatc agaatatttt
      301 gtccatggac tgatcgatac cctctatata gatggtcgga cacttcatga aatcaaagaa
      361 ttccctcaaa aaatgcaaga agcaatcaca cgatacagag ataacttcgc aaaggacaga
      421 gaaatatttc tcagaataca ttcaagctac ccaatattta acgagagttt acaactactc
      481 gttccagtat tcactatagc atatttagga gtaagcaatg gtaattatcc aacaagagat
      541 gaagcacccc aaataacacc cactatcgac cacctggtaa catctctagc aggagtttac
      601 tttagctcct caaaaatagg aaatggtcca gaacagcaag aaaatataag aataaactac
      661 attaacaaaa atatactaat ttattcaaac accagcgaaa agattgatga aaaaggcctc
      721 aatttaattc aaaaatttga agaacctttc gaagcattca ctggacaact cgcattatta
      781 ccagaggaca tgaagagact tttatgcagg catatttctc aagcaccaag acacagctgt
      841 gaatactgct cagacaacag cacaaccatg gagtaa
//
LOCUS       XM_071831868            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841662), mRNA.
ACCESSION   XM_071831868
VERSION     XM_071831868.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139841662"
                     /note="uncharacterized LOC139841662; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841662"
     CDS             1..1089
                     /gene="LOC139841662"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687969.1"
                     /db_xref="GeneID:139841662"
                     /translation="MAEEEEQSQQTSSPEEPKKKWYVIFDGPFKGVYNDWLIANQHIA
                     GKRVTHKSYTSREAAITAYKAAYKSMLMQQPLEAKPPAGSGMVNLGQYLHGQKASLNA
                     INRIRNILSTTEYEDRKNPSTEKFQRLWDSLVNYNETHTAMMFYPKNRKTGLKAVFLP
                     EASPLTRSEYFVHGLIDTLYIDGRTLHEIKEFPQKMQEAITRYRDNFAKDREIFLRIH
                     SSYPIFNESLQLLVPVFTIAYLGVSNGNYPTRDEAPQITPTIDHLVTSLAGVYFSSSK
                     IGNGPEQQENIRINYINKNILIYSNTSEKIDEKGLNLIQKFEEPFEAFTGQLASLPED
                     MKRLLCRHISQAPRHSCEYCSDNSTTME"
     misc_feature    58..177
                     /gene="LOC139841662"
                     /note="Caulimovirus viroplasmin; Region: Cauli_VI;
                     pfam01693"
                     /db_xref="CDD:460297"
ORIGIN      
        1 atggccgaag aagaagaaca atctcagcaa acatcaagtc cagaagaacc aaagaaaaaa
       61 tggtatgtca tctttgacgg accattcaag ggagtataca atgattggct aatagcaaat
      121 caacacatag caggaaaacg tgtaacacac aaaagttata cgtctcgaga ggcagcaatt
      181 acagcataca aagcagcata caaatcaatg ctaatgcaac aacctcttga agccaaacct
      241 ccggcaggat caggaatggt taacctcggt cagtatttac acggtcaaaa agcaagcctc
      301 aatgccataa atagaatacg aaacattctc tctacaacag aatatgaaga cagaaaaaat
      361 ccatcaacag aaaaattcca aaggctatgg gatagccttg taaattacaa cgaaactcat
      421 acagcaatga tgttttatcc caaaaatagg aaaactggcc tcaaagcagt ttttctacca
      481 gaagcatcac cattaacaag atcagaatat tttgtccatg gactgatcga taccctctat
      541 atagatggtc ggacacttca tgaaatcaaa gaattccctc aaaaaatgca agaagcaatc
      601 acacgataca gagataactt cgcaaaggac agagaaatat ttctcagaat acattcaagc
      661 tacccaatat ttaacgagag tttacaacta ctcgttccag tattcactat agcatattta
      721 ggagtaagca atggtaatta tccaacaaga gatgaagcac cccaaataac acccactatc
      781 gaccacctgg taacatctct agcaggagtt tactttagct cctcaaaaat aggaaatggt
      841 ccagaacagc aagaaaatat aagaataaac tacattaaca aaaatatact aatttattca
      901 aacaccagcg aaaagattga tgaaaaaggc ctcaatttaa ttcaaaaatt tgaagaacct
      961 ttcgaagcat tcactggaca actcgcatca ttaccagagg acatgaagag acttttatgc
     1021 aggcatattt ctcaagcacc aagacacagc tgtgaatact gctcagacaa cagcacaacc
     1081 atggagtaa
//
LOCUS       XM_071831869            1059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gamma-interferon-responsive
            lysosomal thiol protein-like (LOC139841663), mRNA.
ACCESSION   XM_071831869
VERSION     XM_071831869.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1059
                     /gene="LOC139841663"
                     /note="gamma-interferon-responsive lysosomal thiol
                     protein-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 8 Proteins"
                     /db_xref="GeneID:139841663"
     CDS             58..900
                     /gene="LOC139841663"
                     /codon_start=1
                     /product="gamma-interferon-responsive lysosomal thiol
                     protein-like"
                     /protein_id="XP_071687970.1"
                     /db_xref="GeneID:139841663"
                     /translation="MESRILLIFIICLFTINTCSSLSSSSSLLSSSDIIEIVPLKDVE
                     KAEVEKVQVGVYYESLCPYCENFIVNYLIDVFIEGIDAIADVKLFPYGNAKVNANGNI
                     TCQHGEQECVLNTVEACAISTWPDVHDHFPFVYCVERYLYFDKFDKWESCFEELSLDP
                     KPVKDCYANGYGYQLNLQYAEATNSLQPPKKYVPWVVVDGKPLYDDYIYIVNRICAAY
                     KGPTLPKACLRCLASPENQNHIGESVDKVIPLHPVTYPEQSSILSKLKSSLTSLMFNT
                     NLVA"
     misc_feature    220..519
                     /gene="LOC139841663"
                     /note="Gamma interferon inducible lysosomal thiol
                     reductase (GILT); Region: GILT; pfam03227"
                     /db_xref="CDD:460853"
     polyA_site      1059
                     /gene="LOC139841663"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catgactggc tcctgttaga aaccgttgaa cattaagctc tgaccaattt accaacaatg
       61 gaatcaagaa ttctgctaat tttcatcatc tgtttgttca caatcaatac ttgttcatca
      121 ttatcatcat catcatcatt attatcatca tctgatatta ttgaaatcgt tcctctgaaa
      181 gatgtagaaa aggctgaagt tgaaaaggtt caagtaggag tctactacga atccctttgc
      241 ccgtactgcg aaaacttcat cgttaattat ttgatcgatg tgttcatcga aggaatcgat
      301 gctatcgctg atgttaaact gtttccatat ggaaatgcaa aagtcaatgc taacggcaac
      361 atcacttgcc agcatggtga acaagagtgt gtgcttaaca ctgttgaagc ttgtgcaatc
      421 agtacttggc ctgatgtgca tgatcacttc cctttcgtct attgtgtcga aagatacctt
      481 tacttcgata agtttgataa gtgggaatca tgctttgagg aactaagttt agatccaaaa
      541 cctgtgaagg attgctacgc taatggctac ggataccaac taaacctaca atacgcagag
      601 gcaacaaatt cgcttcagcc acctaagaaa tacgttccat gggttgttgt tgacggaaaa
      661 ccactatatg atgactatat atatattgta aacaggatct gcgctgcgta caaggggccc
      721 actttgccca aagcttgcct aaggtgtctt gcatcacctg aaaaccaaaa ccacattggt
      781 gaatcagtcg ataaagtgat ccctcttcat ccagttactt atcctgagca gtcatcgata
      841 ctttcgaaac ttaaatcatc cttgacatct ttgatgttca acacaaactt ggtagcataa
      901 taagaaggta aaccacactg caggaagaag taatggtaag ccccatagta aatttgtaaa
      961 ataataactt tttcagtttg atatgttcac ttcaaaaagt tgatatttgt attatgtatt
     1021 gtaaaacttt ataggcaagt ttgtattatt tcttcgtaa
//
LOCUS       XM_071831870            1661 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides inorganic phosphate
            transporter 1-4-like (LOC139841664), mRNA.
ACCESSION   XM_071831870
VERSION     XM_071831870.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1661
                     /gene="LOC139841664"
                     /note="inorganic phosphate transporter 1-4-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 60 Proteins"
                     /db_xref="GeneID:139841664"
     CDS             1..1593
                     /gene="LOC139841664"
                     /codon_start=1
                     /product="inorganic phosphate transporter 1-4-like"
                     /protein_id="XP_071687971.1"
                     /db_xref="GeneID:139841664"
                     /translation="MASNGNLQVFKALDGAKTQWYHFTAIVIAGMGFFTDAYDLFCIS
                     LVTKMLGRIYYHTPGSAKPGSLPPNVSAAVNGVALVGTLAGQLFFGWLGDKLGRKKVY
                     GITLMLMCLCSIASGLSFGSNPTMVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKK
                     TRGGFIAAVFAMQGFGILGGGIFAIIISSVFDSKFKAPSYEVDPIGSTVPEADYVWRI
                     ILMVGAVPAILTYYWRMKMPETARYTALVAKDANKAAEDMSKVLQMDIKPEQQKINQV
                     VEKSGNSFGLFSNEFLKRHRWHLLGTTTTWFLLDIAYYSQNLFQKDIFTAIGWIPAAK
                     KMNAIQEVYRIARAQTLIALCSTVPGYWFTVFLIDRIGRFKIQLLGFSMMTIFMFALA
                     IPYNHWTHPQNNIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASG
                     KLGAIVGAFGFLYLAQNKDPAKVDAGYPAGIGVKNSLIFLGVINLLGTLCTFLVPESN
                     GKSLEEMSGENEDESTVVDSPV"
     misc_feature    34..1554
                     /gene="LOC139841664"
                     /note="phosphate:H+ symporter; Region: 2A0109; TIGR00887"
                     /db_xref="CDD:129965"
ORIGIN      
        1 atggcatcta atggaaactt acaagttttt aaggcattag atggtgcaaa aacacaatgg
       61 tatcacttca ctgcaattgt aatagctgga atgggctttt tcacagatgc ttatgatctc
      121 ttttgcatct ctttggtcac taaaatgttg ggccggattt actaccacac accgggctcg
      181 gcaaagcccg ggagtttacc accgaacgtg tctgctgctg tcaacggggt tgctctagtt
      241 gggaccttag cgggtcagtt gtttttcggg tggctcgggg ataaacttgg gaggaaaaag
      301 gtttatggta ttacactaat gctgatgtgt ctttgctcaa ttgcttcagg cttgtcgttt
      361 gggagtaacc cgactatggt tatgactact ctttgtttct ttcggttttg gctcgggttt
      421 gggattggtg gtgattaccc gctttcggct acaattatgt ccgagtactc gaataagaaa
      481 actcgaggag ggtttatcgc ggccgtgttt gcgatgcaag ggtttgggat tttaggaggt
      541 ggtattttcg ccatcattat ttcttcagtg ttcgattcaa agtttaaggc tccgagttac
      601 gaggttgatc cgattggttc cacggttccc gaggctgatt acgtgtggag aataattttg
      661 atggtgggag cggtccccgc tatcttgacc tattattgga ggatgaagat gccagaaaca
      721 gcccgttata ccgccttagt agccaaagac gctaacaagg cggctgaaga tatgtcgaaa
      781 gttttgcaaa tggatatcaa acccgaacaa caaaagatta atcaggtggt ggagaaatcg
      841 ggtaacagtt tcgggctttt tagtaatgag tttttaaaac gacacaggtg gcatttactt
      901 ggaaccacaa ccacttggtt tttactcgat atcgcttact acagccaaaa cttgttccaa
      961 aaagatattt tcactgccat cgggtggatc cctgccgcaa aaaagatgaa cgcgattcaa
     1021 gaggtgtacc gtatcgccag agcacaaaca ctaatcgcgc tatgcagtac tgtccccgga
     1081 tactggttta ccgtttttct gattgatagg atcgggcgtt tcaagattca actactcggg
     1141 ttttcaatga tgacaatctt tatgttcgcg ttagcaatcc cttacaacca ttggactcat
     1201 ccgcaaaaca acattgggtt cgttgtgtta tactcgttaa ctttcttctt tgctaatttc
     1261 gggccaaatg caactacttt tgtggtcccg gctgaaattt tcccagcccg tttgcgatca
     1321 acttgccatg gtatttctgc tgcatcagga aagttaggtg cgattgtggg agcattcggg
     1381 ttcttatatt tggctcaaaa taaagatccg gctaaggtag atgcagggta tcctgctggt
     1441 ataggtgtaa aaaactcgtt gatttttttg ggggtgatca atcttttggg aactttgtgt
     1501 acgtttttgg tgcccgaatc gaatgggaag tcacttgagg agatgtctgg ggagaatgaa
     1561 gacgaatcaa cagtagtaga ttcgccagtt taagtgaatt aaaatgagat tttttctttt
     1621 actttaatat tagttcatta gttggatcaa gagttttgag a
//
LOCUS       XM_071831871             969 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            kinase Aurora-3-like (LOC139841665), mRNA.
ACCESSION   XM_071831871
VERSION     XM_071831871.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..969
                     /gene="LOC139841665"
                     /note="serine/threonine-protein kinase Aurora-3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 Proteins"
                     /db_xref="GeneID:139841665"
     CDS             1..969
                     /gene="LOC139841665"
                     /codon_start=1
                     /product="serine/threonine-protein kinase Aurora-3-like"
                     /protein_id="XP_071687972.1"
                     /db_xref="GeneID:139841665"
                     /translation="MDSDLCPFCSSLMEDQNHISPTVDIQFHYGVIFAHVIQYQISSM
                     DSSKSSKRNWSIDDFEIGRPLGKGKFGRVYLARESKSKYIVALKVIFKEQIEKYRLQH
                     QLKREMVIQTSLRHPHVLRLYGWFHDAERIFMILEYAHGGELYGELRRSGHFPEEQAA
                     TYIASLTQALTYCHKKNVIHRDIKPENLLLDHEGRLKIADFGWSVQSTNKRHTMCGTL
                     DYLAPEMVEKTAHDYAVDNWTLGILCYEFLYGAPPFEADSQADTFRRIMNVDLTFPST
                     PHVSEEAKDLITQLVVKDSTRRLSLENILKHPWIIMNADPNGTCLK"
     misc_feature    172..930
                     /gene="LOC139841665"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Aurora kinase; Region: STKc_Aurora; cd14007"
                     /db_xref="CDD:270909"
     misc_feature    order(193..207,217..219,256..258,262..264,358..360,
                     406..417,427..429,433..435,544..546,550..552,556..561,
                     565..567,598..600,607..609,646..657)
                     /gene="LOC139841665"
                     /note="active site"
                     /db_xref="CDD:270909"
     misc_feature    order(193..207,217..219,256..258,262..264,358..360,
                     409..411,415..417,427..429,556..561,565..567,598..600)
                     /gene="LOC139841665"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270909"
     misc_feature    order(205..207,427..429,433..435,544..546,550..552,
                     556..558,607..609,646..657)
                     /gene="LOC139841665"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270909"
     misc_feature    order(595..624,628..657)
                     /gene="LOC139841665"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270909"
ORIGIN      
        1 atggattcag acctctgccc attttgtagc agtttgatgg aggatcaaaa ccacatttca
       61 ccgactgtag atattcaatt ccattatggc gtgatttttg ctcatgtaat ccaataccaa
      121 atctcatcaa tggattcttc caaatcatct aaacgcaact ggtctattga cgatttcgaa
      181 atcggaagac cgctcggaaa gggcaaattc gggagagtat atctcgctcg tgaatcaaag
      241 agcaagtaca tagtggcatt gaaagtgata ttcaaagagc agattgaaaa gtacaggctg
      301 caacatcagc tcaaaagaga gatggtgata caaactagcc ttcgtcatcc acatgttctt
      361 cgtctttatg gttggtttca tgatgctgaa aggatattta tgattttgga gtatgctcat
      421 ggtggtgagc tttatggtga gcttcgaaga tctggtcatt ttcccgagga acaagctgcc
      481 acttatattg ctagccttac acaggcatta acatactgcc acaagaagaa tgtgatccac
      541 cgggatatca agccggagaa tctattgctt gatcacgagg gtcggttgaa gatagctgac
      601 tttgggtggt ctgtacaatc aacaaataaa aggcacacaa tgtgcggaac attagactat
      661 cttgcaccgg aaatggtgga aaaaacagct catgattatg cagttgataa ttggactttg
      721 ggcattcttt gttatgaatt tctgtatggt gcacctccat ttgaggcaga cagccaggct
      781 gatacgttcc gaaggataat gaacgttgac ctcacttttc cttctacccc tcatgtttct
      841 gaagaagcta aagatctcat cacacaactt gtagtgaaag actctacaag aaggctctcc
      901 cttgagaaca tcttaaagca tccttggatc atcatgaacg ctgatcctaa tggtacatgc
      961 cttaaatag
//
LOCUS       XM_071831872             375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841666), mRNA.
ACCESSION   XM_071831872
VERSION     XM_071831872.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..375
                     /gene="LOC139841666"
                     /note="uncharacterized LOC139841666; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841666"
     CDS             1..375
                     /gene="LOC139841666"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687973.1"
                     /db_xref="GeneID:139841666"
                     /translation="MTLRSDLVSGNVCLTTEQGHFSVVVESSAPPVCQCPLHHLKVVT
                     LVERTIILMCGEFLGQYVVVLHCWLLIVWAWRYRRRKRMSELERAADAGEALRMTIVG
                     SMTTPFAMATRTMPNLETDFSL"
     misc_feature    <13..78
                     /gene="LOC139841666"
                     /note="Protein of unknown function (DUF1191); Region:
                     DUF1191; pfam06697"
                     /db_xref="CDD:461989"
ORIGIN      
        1 atgacgctta gaagtgattt ggtatctggg aatgtatgtt taaccactga acaggggcac
       61 ttttcggttg ttgttgaatc atcagcccct cctgtgtgcc agtgccccct gcaccacttg
      121 aaggtcgtca cactagtaga aagaacgatc attttaatgt gtggggaatt tttgggtcag
      181 tatgtggtag tattgcattg ttggttgctg atagtgtggg catggagata caggagaaga
      241 aaacgaatga gtgaactaga aagagctgca gatgctggtg aagcgttgcg tatgaccata
      301 gtcgggagca tgacaacacc atttgctatg gccacaagaa caatgccaaa cttggaaact
      361 gactttagtc tctga
//
LOCUS       XM_071831873            1047 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841667), mRNA.
ACCESSION   XM_071831873
VERSION     XM_071831873.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1047
                     /gene="LOC139841667"
                     /note="uncharacterized LOC139841667; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841667"
     CDS             1..1047
                     /gene="LOC139841667"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687974.1"
                     /db_xref="GeneID:139841667"
                     /translation="MACRRRHGLSRSSTFNEGIRRSPDDDDTTTTSFGTLPHRGSDPR
                     LDSFRSGRAFHLSFKNRSKGAETYDYTSMKSTNEPRGFWGVLARKAKAILEDEVPQQS
                     KTYSSVKPHKIGFSKSSQFTGIQSRREFESYDNLKKTDSPALSISLDRLKSSLNQIEI
                     SRKTLEADKNTQNLNQETPKMQNSRMVLNKNEKQDRGMQSVQQQKKQETQLQASRDVT
                     VATASKVKQLGRELKTLKEELAKAKEQCCQLEEENKKLYETHEKEDYPADDDMIRVQL
                     ETLLAEKGRLAHENSVYALENRYLREIVEFHQQLSMQDMVYLDESNKGVSLPTTPTET
                     TLNPLGTPSSSKSV"
     misc_feature    <442..>915
                     /gene="LOC139841667"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]; Region:
                     COG4913"
                     /db_xref="CDD:443941"
ORIGIN      
        1 atggcgtgcc gtagacggca tggactttct aggtcttcta cgttcaatga aggcattcgc
       61 cggtcgccgg acgacgatga caccaccacc acatctttcg gcacgctacc gcaccgaggt
      121 tctgatcctc gtctcgattc attccgctca ggacgcgcat ttcacttgtc gtttaaaaac
      181 cgatcaaagg gtgctgaaac ctatgattat acatcaatga agagtacgaa tgagccacgg
      241 ggattttggg gcgttttagc cagaaaagct aaagcaattc ttgaagatga agttccacaa
      301 caatcaaaaa cttatagcag tgtgaaacca cataaaattg gcttttccaa aagtagccag
      361 tttactggta ttcagtctcg gcgtgaattt gaatcatatg ataatttaaa gaaaacagac
      421 agtcctgcat taagtattag cttggatcga ctcaagtctt cgcttaatca aattgagatc
      481 agtcgaaaaa ctttggaggc agacaagaat actcaaaatt tgaaccaaga aacacctaaa
      541 atgcagaata gtagaatggt attgaataaa aacgaaaaac aggaccgtgg aatgcaatct
      601 gtgcaacaac agaaaaaaca agaaacccaa cttcaggctt ctcgcgacgt gacagttgca
      661 acagcttcta aggttaaaca acttggccgg gagctaaaaa ctttaaaaga agaattggcg
      721 aaagcaaaag aacaatgttg tcaactagaa gaagaaaata aaaagcttta cgagactcac
      781 gaaaaggaag actaccctgc agacgatgac atgattcgtg ttcagttaga gacactatta
      841 gcagaaaagg gacgtttggc tcatgagaat tcggtatatg cacttgagaa tagatacttg
      901 agggaaatag ttgaatttca ccagcaactg agtatgcaag atatggtgta tttggatgag
      961 agtaacaaag gggtgtcact accaaccaca cccacagaaa ccaccctgaa tccattgggc
     1021 acacctagtt caagcaaatc agtttaa
//
LOCUS       XM_071831874            2016 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841668), mRNA.
ACCESSION   XM_071831874
VERSION     XM_071831874.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2016
                     /gene="LOC139841668"
                     /note="uncharacterized LOC139841668; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841668"
     CDS             1..2016
                     /gene="LOC139841668"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687975.1"
                     /db_xref="GeneID:139841668"
                     /translation="MVSYTLCVQETRWKGRGAARINDYKLWFSGSRVARNGVGIIIGP
                     PYNEYVVDVGRQSDRIMSVRLVIQEVTYTVICAYAPHAGRGDAEKRHFWESLDEVVRM
                     CPPDHRLLIGGDLNGHIGSDVEGYAGVHWGFGYGARNEEGLSILEFAVAHDLAVVNSF
                     FKKRDAQLATFHSGGHSTQIDYMLIRKGDLRTCGDCKVLTAWTCSSQHRLLVMDLVLQ
                     RLTTKSVRQVQPKILWKKLNGEKAETFKTLVVGRVDAELEMVSNDDADQMWNCLASSI
                     REVAKETLGVALGTSRDHRAVRESWWFSDKVQSKVALKQLRFRELITGGEGTPTDRIR
                     AVERYKEAKREAKKAVALAKENAYEDLYKKLDSKEGANDIYKIAKARERRRMDLDNIK
                     FIKNEDGQTLVKEDEIRKRWEEYFSSLFVGGRPERHEDLQDADIEQSHNNIDCERISE
                     EEVRLALRKMGRNKSVGPDQIPIEAWRCLGDTGVRWLTCLFNKTFRSSKMHIEWRLSE
                     TITIYKNKGDAQCCGAKSCVRTPVGNTEVFPIEVGLHQGSALSPFLFALILDELSRGI
                     QECIPWCLIFADDIVLVLDSKEELNRRLEQWRVALESNGLYISRQKTEYLSCDFDRNV
                     DEQSDGVNICIGDQILHPQISFRYLGSVLHKSERIDEDVSHRIKTHA"
     misc_feature    16..645
                     /gene="LOC139841668"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(28..30,232..234,340..342,346..348,541..543,619..624)
                     /gene="LOC139841668"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(28..30,619..621)
                     /gene="LOC139841668"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(232..234,346..348,622..624)
                     /gene="LOC139841668"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    <1627..1959
                     /gene="LOC139841668"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1639..1641
                     /gene="LOC139841668"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggtttcgt acacgttgtg cgtccaagag actagatgga aaggtcgagg ggcggctagg
       61 atcaatgact acaagttgtg gttctcggga tcgagagtag ctaggaatgg ggttggaatc
      121 attattggcc ctccctacaa cgagtatgtt gtggatgtag gtagacagag cgacaggatt
      181 atgtcggtta ggttggttat tcaggaggtg acttacacgg taatttgcgc ttacgcaccc
      241 catgcgggcc gtggagatgc tgaaaagaga cacttctggg aatcgttaga cgaggttgtg
      301 aggatgtgcc ctccggacca cagattactt attggtggag atctcaatgg ccatatagga
      361 tctgatgttg agggatatgc gggagtccac tggggttttg ggtacggagc tagaaatgag
      421 gaaggactct ctattcttga atttgctgtt gcccacgact tggcagttgt gaattcgttt
      481 ttcaagaaga gggatgctca gttagcaact tttcatagcg gaggtcatag tacccagatt
      541 gactacatgt taattcgcaa aggggatctt aggacttgtg gagactgtaa ggtcctgact
      601 gcctggacat gctcctccca gcacagactg ttggtcatgg atttggttct ccagagactg
      661 accaccaaga gtgtgagaca agtccaacct aagatcttgt ggaagaagtt gaacggagag
      721 aaggcagaga cctttaaaac cttggttgta ggtagagtgg atgctgaatt agaaatggta
      781 tccaatgatg acgcggatca gatgtggaat tgtctggcgt cctccattag agaggtagcc
      841 aaggaaaccc taggtgtggc tctaggtaca tctagagacc atagggctgt tagagaatca
      901 tggtggttca gtgacaaggt tcaaagcaaa gttgcgctta agcaattaag gtttagggag
      961 cttatcactg gtggggaggg gactccgact gatagaatta gggctgtaga gagatataaa
     1021 gaagccaaaa gagaagctaa gaaggctgta gccctagcaa aagaaaatgc atatgaagat
     1081 ctgtataaga aacttgactc caaagaggga gctaatgata tttacaagat agccaaagct
     1141 agggagcgaa gacgtatgga tcttgataac atcaagttta tcaaaaatga agatggtcaa
     1201 actttagtta aggaagacga aattaggaaa agatgggaag agtatttctc atctctcttt
     1261 gtagggggaa gaccagagcg ccacgaggac ttacaagacg ctgatataga acaatcccat
     1321 aacaacatag attgtgagag gattagcgaa gaggaagtaa gattggcact acgaaagatg
     1381 gggagaaata aatcagtggg accagatcag atccctattg aggcgtggcg gtgcctgggc
     1441 gacactggtg ttaggtggct gacttgcctc tttaacaaga cgtttcgaag ctctaaaatg
     1501 catatagaat ggagactgag tgagactatt accatctata agaacaaggg ggatgctcaa
     1561 tgttgcgggg cgaagtcttg tgttcgaaca ccggtgggaa atactgaagt tttcccaata
     1621 gaagtaggcc tgcaccaggg atcggccctt agccctttcc ttttcgcttt gatccttgat
     1681 gaactttctc gagggataca agagtgcatc ccttggtgcc tgatttttgc cgatgatatt
     1741 gtgctcgttt tggactctaa ggaggagctt aatagaagac ttgagcaatg gagggtggct
     1801 ttagaaagta atggtctata cattagtaga caaaagacag aatatcttag ttgcgatttt
     1861 gataggaatg ttgatgaaca aagtgatgga gtgaacatct gtattggaga ccagatcttg
     1921 catccacaaa tttcgtttag atacctgggc tcggtgctcc acaaatcgga gaggatagat
     1981 gaagatgtgt cgcaccgaat taagacccat gcatag
//
LOCUS       XM_071831875            1327 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841669), mRNA.
ACCESSION   XM_071831875
VERSION     XM_071831875.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1327
                     /gene="LOC139841669"
                     /note="uncharacterized LOC139841669; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841669"
     CDS             605..1327
                     /gene="LOC139841669"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687976.1"
                     /db_xref="GeneID:139841669"
                     /translation="MSNTPPAIILGSSDSSATPPAAAADTPIPLPTSDPGTSSSGTSS
                     QAPAPVVTSSGAQDPSEILAPSAPGPSGSQPRSGEIVIPAEFGKGPFRNRYRHWCRRA
                     SDGRLIPIRPARYRQMMATQGRPVQPPVQPPHGSDDPSSTDASFEDTSSDESSDDEDP
                     ADVPIEAPSTPPKTWWKLEMKSDDGGVVKSKRIMLEMVIGRFVWKQKTVISFNGGSDG
                     VWLLCQKVVTVVAGVAAKRFLD"
ORIGIN      
        1 tctccgcttt tctctcaaaa tagccaccac caaatcaatg aagaacaaac tttcaatttt
       61 tccaacctgc actccttaat ccaaattctt ctatgattgt agtttctatt tcttctgtag
      121 cgattatcat cgtcatcttc atccgtcaat catgtatttc ttccgcaaat ctcatatgtg
      181 cttttattaa ttagggttca tctttgaaaa tatatgttct gtgaagatgt gtaattgata
      241 ctttgtgctt ttctggaaac tatgtgtttt cggaaacccc ctcaaacttt acggttgttt
      301 gcaaagaaca agaaaaaaac cgatactaaa accgttcaag gggtgaagat ttaagtacca
      361 ctgcaagcag ggaagtgaaa gaagtggcta aagaatgtat gatgattatc actttggtct
      421 cgatctcggt tcaagtatta tttgaaagcg tactcaccat tgggattaca gtacaacgac
      481 cgagaaccaa tttaatatcc aacagtagag atgatagcaa aaaagttgaa taagatcctt
      541 ggtcaactgc ttgcgaggtg gtaattcagc gaggaacagg tttgcaccta aattgagaaa
      601 cccgatgtcg aatactccac ctgctatcat tttgggcagt tcagactcat cagccacccc
      661 acctgctgct gctgccgaca ccccgatccc gctacccacg agtgaccccg gcacttcatc
      721 ttccgggact agcagccagg cgcctgcccc agtggttact tctagcggag cccaggaccc
      781 ttcggagatt ctagctccat ctgcccccgg accctcagga tcacagcccc gctccggtga
      841 gattgtgatt cccgcggagt tcgggaaagg tcctttccgt aaccggtatc gccattggtg
      901 ccgacgcgcc tctgatggac gtctcattcc gatcagaccc gctaggtaca gacagatgat
      961 ggccactcaa ggacggccag ttcagccacc cgtacagcca ccacatggtt cggacgaccc
     1021 gtcatccact gatgcttcat tcgaagacac gtcctcagac gaatccagtg atgatgagga
     1081 ccctgctgat gtacctatag aggcaccctc caccccgccg aagacgtggt ggaagttaga
     1141 gatgaagagt gacgatggtg gtgtcgtgaa gagtaaaaga ataatgttgg agatggttat
     1201 tgggcggttt gtttggaaac agaaaacggt aataagcttc aatggtggta gtgatggagt
     1261 atggttattg tgccagaagg tggtcacggt ggtggccggt gtggctgcca aacggtttct
     1321 cgattga
//
LOCUS       XM_071831876             639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841670), mRNA.
ACCESSION   XM_071831876
VERSION     XM_071831876.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..639
                     /gene="LOC139841670"
                     /note="uncharacterized LOC139841670; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841670"
     CDS             1..639
                     /gene="LOC139841670"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687977.1"
                     /db_xref="GeneID:139841670"
                     /translation="MDVEKKEEQPLRSTPATDDPSRKLKRRRRIIIWSSVIGTILTIA
                     LIMLILSLTVFKAKKPKMTVDSVSISDLDVNVNPIPLQISLNLSLAITLTVNNPNKVG
                     AKYQNSSAILRYRGKDVGDVPIPAGKIGSDDSKQLNLTLTVFADRLASDSQLYSDILS
                     GNMVFSTYAKIKLKVRVLFIHIHATSTSTCDVNIDIKNRRIANQTCHYKNRL"
     misc_feature    97..618
                     /gene="LOC139841670"
                     /note="Late embryogenesis abundant protein; Region: LEA_2;
                     cl12118"
                     /db_xref="CDD:448410"
ORIGIN      
        1 atggacgtcg aaaaaaaaga agagcagccg ctacgatcaa ctccggcgac cgacgatcca
       61 tcacgcaaac tcaaacgccg gcgaaggata atcatctggt catcggtaat cggaactata
      121 cttactatcg ctttaatcat gctcatatta tcactaactg ttttcaaagc caaaaaacct
      181 aaaatgaccg ttgattcagt atcaattagc gatctagatg taaacgtaaa tcccatacca
      241 cttcaaattt cattaaacct atcattagca ataacgctta cagttaataa ccctaacaaa
      301 gtcggggcta agtaccagaa cagctctgct attctccggt acagaggaaa agacgtcggc
      361 gatgttccga ttcctgccgg aaaaattggt tccgatgatt cgaaacagtt gaatttaact
      421 ttaactgttt ttgcggatcg attagcttct gattcgcaat tatatagtga tatattgagc
      481 ggtaatatgg tgttttccac ttatgcgaaa attaagctta aagttcgtgt attatttata
      541 catattcatg ctacttcaac ttcaacttgt gatgtgaata ttgatattaa gaatagaaga
      601 attgctaatc agacttgtca ttataagaat cgtttgtag
//
LOCUS       XM_071831877             438 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841671), mRNA.
ACCESSION   XM_071831877
VERSION     XM_071831877.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..438
                     /gene="LOC139841671"
                     /note="uncharacterized LOC139841671; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841671"
     CDS             1..438
                     /gene="LOC139841671"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687978.1"
                     /db_xref="GeneID:139841671"
                     /translation="MHEGAYSTHSSYQTIVSRIKRMGYFWPHMYRDTYDLIVNCEACQ
                     IHTPVNRSPHRNMILIYAAWPLYKWGIDIVSPFPGGVDNVKFLVVAIDYFTKWVEAKL
                     LSTITGRKILTFVWEDIVCRFGLTREIVSDNGMQLAHNPFKDW"
     misc_feature    <1..138
                     /gene="LOC139841671"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    193..435
                     /gene="LOC139841671"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgcacgaag gagcctactc cacacattcc agctaccaaa cgatagttag caggatcaag
       61 agaatgggtt atttctggcc acacatgtac cgggatacgt atgacctaat cgttaactgc
      121 gaggcatgtc aaatacacac tcccgtcaac agatctcctc atcgaaacat gattctaata
      181 tacgctgcct ggccattata caaatggggg attgatatcg tcagcccatt cccagggggt
      241 gtcgacaacg ttaaattctt agtagtcgca atcgactatt ttaccaagtg ggtcgaagcg
      301 aaactgttaa gcacaattac aggaaggaag atcttaacat ttgtatggga ggacattgtt
      361 tgtcgttttg gcttaacacg agagatagtc agtgacaatg gcatgcagtt agcacataat
      421 ccattcaaag actggtga
//
LOCUS       XR_011757417            2139 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841672), transcript variant X1, ncRNA.
ACCESSION   XR_011757417
VERSION     XR_011757417.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2139
                     /gene="LOC139841672"
                     /note="uncharacterized LOC139841672; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841672"
     ncRNA           1..2139
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841672"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139841672"
ORIGIN      
        1 ttcaagtcat ggtgagacat tgtggaactt gtcattagtg gtgacttact taaggtaaag
       61 tgacattttt ctcctttgac ctttaatctc aaattctttt ctgattgaac actagatgga
      121 gaatataatg aacatgatca taatggaaaa tgaggagctc aagcttgggc tttgtgatct
      181 tgtggctaca acaagatcga aaaatataat caggttgtga ttatgctatg aaccttcacc
      241 aaagcaggtg cttaattcgt gaatatttaa ttcaggagat ttgaaaagaa gaaataagtt
      301 atccgatttt ggccttagtc cgctgcctta acatttgagg gtatgaaaac caaatggtct
      361 gtaaatcaaa gggtatgctg cttagaaatc aagatagtaa caggcactac tatgtttatg
      421 atgttttatg atgacacgct attgatgatc gaaacgttgc agttcgttat caaaatgtgt
      481 gttgaattta aatttgggag ctttttttaa gaaggacttt aagaacgagg ttagtcttcg
      541 tttgatatac tcttgaacct ttatcacttt atgtagttat atgatacact caaacacgac
      601 taaaaattac aagctttgat tgtgtactgt tatacaatat aaacattata agccagttta
      661 tgatggtaat tcattctttg cttcattgtc atgtatgatt gtagattatg tcagccgata
      721 acaacattct ctgataagaa tgtaagaaca aggtaatgtc tttctttatt agtatttggt
      781 ttcccacagt tcatggaggt aagcttcctc ttctgattgt tatattattg ttattatgtt
      841 tgtgattgtt tattcatatg gtagcaagtt agcaactatt cctccacagc ttatgcaatt
      901 agctattgtg agtcattact tgataaagac cttttatttt tcgatttttt attcgacatt
      961 attcagttta tggtctgtaa gactatatga tggttctatc catttggata tatggataga
     1021 gatgtttgca ttattggtat ttggttttgt attatttgat ttttcggatt gaatacctca
     1081 taaaaatcgt gcaagacacg ggctctatac gcacgggctc ttaaacatgt cagatttagt
     1141 aagccttaat cgttgttatt tgtgtaacac aatatttcag ttatgcaact tttggtgatg
     1201 ttcttacatt tttatttgct attgttgcta atgtgttgtg ttttgctaat gtcggtatta
     1261 atagccttaa tatatgtgtt ttgagtaaaa caaaaaaact taaccatata cgttcccaat
     1321 ttgtttgatt aagaccagcc gtgcaacgca cgggctctta aaggctagtt tttttatatg
     1381 aaatccattt tttgatgaaa caagatcttg aactttgttt aatttttaaa gaaactcatt
     1441 tacatatgta ctgttaatac ttgcaaccaa aaggaagctt tgatgactat taaaaaagtt
     1501 aatgttctag ttatttaagt gtttaattga ttcaatattt tagtgttaat acttgactgt
     1561 cacttagagc ctaaattaaa ttaatgtaga tttaaaatca attgaaattt gattctacca
     1621 ttttcatggc gtctcatact tttttttaac ctacttatta gccggaggtc cattcgaaag
     1681 caatttctct atccatagaa tattgagaga gatgaatttt ttactcttgg gatgtttcac
     1741 tctgggtgaa gaatggactt ctctttattc tatgatagga gaagaattgt ctacatctta
     1801 actctcacat accgcactta tgtgagactg gtgaattgct gtgagtaggg tatgagtggg
     1861 atctttgggg gaagaataag actcgagaag actattcaag caatgttatg gctcagttgg
     1921 ccgaaatttg taagctaccc gaaactctcc gatcttccct ttttgttgtg ataacaagca
     1981 ttaatgaatc attatacttt gatgaatcgt tatactttgt tacttttgga catctcatgt
     2041 taagcttgac ccaaccatct aattacttta tattgtaact tcaattgtac tcagaacatt
     2101 ttcatagcca ttgtaggagt gtattgaata agtttgaat
//
LOCUS       XR_011757418            2041 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841672), transcript variant X2, ncRNA.
ACCESSION   XR_011757418
VERSION     XR_011757418.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2041
                     /gene="LOC139841672"
                     /note="uncharacterized LOC139841672; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841672"
     ncRNA           1..2041
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841672"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139841672"
ORIGIN      
        1 ttcaagtcat ggtgagacat tgtggaactt gtcattagtg gtgacttact taaggtaaag
       61 tgacattttt ctcctttgac ctttaatctc aaattctttt ctgattgaac actagatgga
      121 gaatataatg aacatgatca taatggaaaa tgaggagctc aagcttgggc tttgtgatct
      181 tgtggctaca acaagatcga aaaatataat caggttgtga ttatgctatg aaccttcacc
      241 aaagcaggtg cttaattcgt gaatatttaa ttcaggagat ttgaaaagaa gaaataagtt
      301 atccgatttt ggccttagtc cgctgcctta acatttgagg gtatgaaaac caaatggtct
      361 gtaaatcaaa gggtatgctg cttagaaatc aagatagtaa caggcactac tatgtttatg
      421 atgttttatg atgacacgct attgatgatc gaaacgttgc agttcgttat caaaatgtgt
      481 gttgaattta aatttgggag ctttttttaa gaaggacttt aagaacgaga ttatgtcagc
      541 cgataacaac attctctgat aagaatgtaa gaacaaggta atgtctttct ttattagtat
      601 ttggtttccc acagttcatg gaggtaagct tcctcttctg attgttatat tattgttatt
      661 atgtttgtga ttgtttattc atatggtagc aagttagcaa ctattcctcc acagcttatg
      721 caattagcta ttgtgagtca ttacttgata aagacctttt atttttcgat tttttattcg
      781 acattattca gtttatggtc tgtaagacta tatgatggtt ctatccattt ggatatatgg
      841 atagagatgt ttgcattatt ggtatttggt tttgtattat ttgatttttc ggattgaata
      901 cctcataaaa atcgtgcaag acacgggctc tatacgcacg ggctcttaaa catgtcagat
      961 ttagtaagcc ttaatcgttg ttatttgtgt aacacaatat ttcagttatg caacttttgg
     1021 tgatgttctt acatttttat ttgctattgt tgctaatgtg ttgtgttttg ctaatgtcgg
     1081 tattaatagc cttaatatat gtgttttgag taaaacaaaa aaacttaacc atatacgttc
     1141 ccaatttgtt tgattaagac cagccgtgca acgcacgggc tcttaaaggc tagttttttt
     1201 atatgaaatc cattttttga tgaaacaaga tcttgaactt tgtttaattt ttaaagaaac
     1261 tcatttacat atgtactgtt aatacttgca accaaaagga agctttgatg actattaaaa
     1321 aagttaatgt tctagttatt taagtgttta attgattcaa tattttagtg ttaatacttg
     1381 actgtcactt agagcctaaa ttaaattaat gtagatttaa aatcaattga aatttgattc
     1441 taccattttc atggcgtctc atactttttt ttaacctact tattagccgg aggtccattc
     1501 gaaagcaatt tctctatcca tagaatattg agagagatga attttttact cttgggatgt
     1561 ttcactctgg gtgaagaatg gacttctctt tattctatga taggagaaga attgtctaca
     1621 tcttaactct cacataccgc acttatgtga gactggtgaa ttgctgtgag taggtaagga
     1681 ttctgtttag aatgcatatg ttctacctta acttattttt actgtcatgt tgttcattgt
     1741 tgtctcacag ggtatgagtg ggatctttgg gggaagaata agactcgaga agactattca
     1801 agcaatgtta tggctcagtt ggccgaaatt tgtaagctac ccgaaactct ccgatcttcc
     1861 ctttttgttg tgataacaag cattaatgaa tcattatact ttgatgaatc gttatacttt
     1921 gttacttttg gacatctcat gttaagcttg acccaaccat ctaattactt tatattgtaa
     1981 cttcaattgt actcagaaca ttttcatagc cattgtagga gtgtattgaa taagtttgaa
     2041 t
//
LOCUS       XR_011757419             717 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841673), ncRNA.
ACCESSION   XR_011757419
VERSION     XR_011757419.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..717
                     /gene="LOC139841673"
                     /note="uncharacterized LOC139841673; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841673"
     ncRNA           1..717
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841673"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139841673"
ORIGIN      
        1 tcctctgtct tctctttctc tcattctgcc tcaagaaacc aaacacccat taacgttatc
       61 aacgtccgtt ttttctaatg ttaatcgaat caacaattct tcaacattat acgattaatc
      121 tacacatttt tacaattcga tcgatatatc tatcgtagaa aagtgttaat ttcaatttca
      181 atacggtttt ggggaacctt tacgcatcgg actacttgaa tgtggtgttt aagaacccta
      241 ggttattatt catccatttg gtcgaatttt ctgctcctga tttcaagagt ttccctacgt
      301 cggcgcctta tagcgattct acaaaatttt gagacgctaa ttttgcccta atttcaattt
      361 cagggcatga acaatggaac gtcatcaata gtgaaatggt tatatgacaa tccattactt
      421 tctgatgtga aggtaaaatt gagatgcctg ctgattgaat taaggggggt gttgataaaa
      481 aaaactagga acccagtttt tgactacata atactattgt tgatatatgg ttacatttgc
      541 atgttcgatg atcttagacg aaaagtcaca agatgacaaa accctagatg caaccaggtg
      601 aatgttatga acgtgtctca aaccttccat aaaataagta tattacaatg caactatatt
      661 gtcgtagtct cgaaaggtgg taaaatggat catctggatg ggtgcgtaat gggtcaa
//
LOCUS       XM_071831878            1134 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841674), mRNA.
ACCESSION   XM_071831878
VERSION     XM_071831878.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1134
                     /gene="LOC139841674"
                     /note="uncharacterized LOC139841674; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841674"
     CDS             1..1134
                     /gene="LOC139841674"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687979.1"
                     /db_xref="GeneID:139841674"
                     /translation="MVKEVQSLTEKLAALTRFLSKAAERQFPFFKTLKGCLKQKNFVW
                     SSEADSALQEMKKLLKTLPTLTAPIHGEVLYLYISVANEAFGSILIAERNKIQKPLVA
                     NQFSGSFEAHDPSMQKYLQLLKETVARFEHFELAQVPRSQNKKADALSKLAALTFSHF
                     QKQVWVKELPSKSIESDLMVTSLTEEQPNWMEPILKYIRSNILPEDSREARSVRERAP
                     MYIIQDDILYRKSYCGPMMRCVGPIEAEMIVEENRMPWHDMIPVNSTWPFNKWAIDIV
                     GPFPAGPGNVKFLIVAFDYFTKWVEAKAVRTIIGVQVRNFVWEYIVCRFGIPRELVSD
                     NGTQIAKDPFKTWCADLNIIQKFTSVAYPQANGLCKVTNRDIR"
     misc_feature    130..399
                     /gene="LOC139841674"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    <298..462
                     /gene="LOC139841674"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    799..1089
                     /gene="LOC139841674"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atggttaaag aggtgcaaag tttgacagaa aaactagccg cattaactcg tttcttgtct
       61 aaagccgctg aaaggcagtt tccatttttc aaaaccctaa aaggttgttt gaaacaaaag
      121 aattttgttt ggtccagtga agcagattct gcgcttcaag aaatgaaaaa gttgttaaaa
      181 actttgccta cattaacggc gccaattcat ggcgaagttc tttatcttta tatctctgtg
      241 gcaaacgagg ctttcggatc aattttgatc gcagaaagga acaaaataca aaagccgcta
      301 gtagcgaatc agtttagcgg atcttttgaa gcacatgatc cttctatgca aaagtacttg
      361 cagctattaa aggaaactgt agcgcggttt gagcattttg aacttgcgca ggtgccaaga
      421 agtcaaaata agaaagcaga tgctttgagc aaattagccg ctttaacttt ttcgcatttt
      481 caaaagcaag tatgggtcaa agaattacca agtaagtcga tagaaagtga cttgatggtc
      541 acatctctta cagaagaaca gccaaactgg atggagccaa tcctaaaata tatccgcagt
      601 aatatcttgc cagaggatag tcgcgaagct cgttcagtgc gagagcgagc gccaatgtat
      661 atcattcaag atgatatctt atatcgcaaa tcatactgcg gaccaatgat gcgatgtgtt
      721 ggcccaatcg aggcagaaat gattgtagaa gaaaaccgaa tgccgtggca tgacatgatt
      781 cctgttaatt cgacgtggcc gtttaataaa tgggctatcg atattgtagg accattccct
      841 gcagggcctg gcaatgtcaa attcctgatt gtcgcattcg attattttac taaatgggtt
      901 gaagctaagg cggtccgcac tattattggt gtgcaagtgc gaaattttgt ttgggagtac
      961 attgtttgca ggtttggtat tccgcgagaa ttggttagtg ataacggtac acaaatagcg
     1021 aaagaccctt ttaagacatg gtgcgctgat ttaaatataa tacaaaagtt tacttcagtg
     1081 gcgtacccgc aagccaatgg attgtgcaaa gtaaccaatc gcgatattag atag
//
LOCUS       XM_071831879            1143 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841675), mRNA.
ACCESSION   XM_071831879
VERSION     XM_071831879.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1143
                     /gene="LOC139841675"
                     /note="uncharacterized LOC139841675; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841675"
     CDS             1..1143
                     /gene="LOC139841675"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687980.1"
                     /db_xref="GeneID:139841675"
                     /translation="MKDTDIDAYTNRFLELVTLCPNMVRMEHKKIEHYVEGLPDETKG
                     NVIAAGKETIDGVILMAQNLVMAKRRKLAAGKQTESKVVDNKRKFEPAQDSNKNLNKK
                     VSKGSKSGYAGKQPLCKCFEKHHSGWYTVVCLKCKREGHIAKNSGHFRNQCPKKKEND
                     GNTSNAGNAKSRAFVMTAEEAHSDDEVITGMFLVNDLYATILFDTGADKKYVSTEFCA
                     LFNEESKALDAKRLVEVANGKVMKVEHVYKNGNLTLANKSFKIDLFPVELGSFDVVIG
                     IDWLAPLRAGILCYDKTVSIPLENGEILAIQGEKSAHVKKTEPEEKRIDDVPVVIEFL
                     EIFPDKLPGLPPQRQVEFQIDLTLGATPIAKAPYRLAPSEMKELSN"
     misc_feature    505..906
                     /gene="LOC139841675"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(610..612,616..618,622..624,697..705,820..822)
                     /gene="LOC139841675"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    610..618
                     /gene="LOC139841675"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    610..612
                     /gene="LOC139841675"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(697..708,718..729)
                     /gene="LOC139841675"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaaggata ctgacattga cgcttatacc aaccgcttct tagagttggt tacattgtgc
       61 cccaacatgg tacgtatgga acacaaaaag attgagcatt atgttgaagg actgcctgat
      121 gagacaaagg gtaatgtgat agctgccggt aaggagacca tcgatggtgt gattttgatg
      181 gctcagaatt tggtaatggc taagaggaga aagcttgctg ctggtaagca aactgagtca
      241 aaagttgttg ataataagag gaagtttgag cctgctcagg attccaataa aaatttgaac
      301 aaaaaggttt ctaaaggttc gaaaagtggt tatgctggaa aacaaccgct ttgcaagtgt
      361 tttgaaaagc atcattctgg ttggtacacg gttgtgtgct tgaagtgtaa gcgagaaggt
      421 catatagcca agaattctgg acattttcgt aatcaatgcc cgaagaaaaa ggaaaatgat
      481 ggtaatacta gtaatgctgg gaatgctaaa agtagagctt ttgtgatgac tgcagaagaa
      541 gcccatagtg atgatgaagt tataacgggt atgtttcttg ttaacgatct ctatgcaact
      601 attttatttg atactggtgc cgataagaag tatgtgtcta ctgagttttg tgccttattt
      661 aatgaagaat cgaaagcctt agacgccaag cgtttagtag aagtagctaa cgggaaggtt
      721 atgaaagttg aacatgttta taaaaatggt aacctaactc tagctaataa atctttcaag
      781 atcgacttat ttccagtcga gttaggaagt ttcgacgtag ttatagggat tgattggtta
      841 gccccattga gagcgggaat cctatgctac gataaaactg ttagtattcc tcttgagaat
      901 ggtgaaattc tagccattca aggcgagaag agtgctcacg ttaagaagac tgaaccggaa
      961 gagaaacgta ttgatgatgt accagtagtt atagaatttt tggaaatctt tcctgacaaa
     1021 ctccctggtt taccaccaca aagacaagtt gaatttcaga ttgacttgac tcttggtgct
     1081 acacctattg caaaggcacc ttatcgatta gctccatctg aaatgaaaga gttatctaac
     1141 taa
//
LOCUS       XM_071831880            3249 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841677), mRNA.
ACCESSION   XM_071831880
VERSION     XM_071831880.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3249
                     /gene="LOC139841677"
                     /note="uncharacterized LOC139841677; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841677"
     CDS             1..3249
                     /gene="LOC139841677"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687981.1"
                     /db_xref="GeneID:139841677"
                     /translation="MYQNWQFVPISFPKMQSEDFSEMPIVVSCKIAENGITNMKVHFD
                     NGSSVDILYEQCFIQLSESIRVTLKPTAASLTGFAGESSFPMGVLPLDVELVDDNDDG
                     LVRRARIDFYVMRTSSRYNMLLGRTALGKLGIVPSTIHGMIKFATRKGVATINSTSKV
                     PICAAINVKSAAQETAEVTENMVVVNPAYPEQKIKVGSNLSADTQKQIVQLLVQYMDV
                     FTWCENDMTGVPRNIAEHGLNVNPALNPVVQKRRSMAPDRVKWLCKEVTKLVRAGILR
                     EAQYQSWIANPVLDLNKACPKDNYTIPEIDLKVESLHAFLYKCFLNAARGYHQIPMAQ
                     EDIDKTAFHTGKSIFSYIMMPFGLINAGTTYQRLIDTVFEKKIGCNFEAYVDDLVIKS
                     TTQERIIEDRRETFNTLRKINMKLNPLKCSFGETEGKFLGYLVTEQGIQANPKKIAAI
                     ENMIAPKTIKEVLILTGKLAALTRFLSKAAERQLPFFKTLKGCLKQKSFVWTSDAEAA
                     FQEMKKLLKTLPTLTAPIDGEILYLYISVANEAFGSVLIAEREKIQKPVYFVSKALTG
                     SEINYAPIEKFVYALILTSRRLRRYFQGHLVHVLTNMPVKQVLTKPEISGRLALWAVE
                     LGAYQISYLLQSAVKGQVMADYLAEISGELEVINERTALKPVKGETWDLFADGASCAE
                     GAGAGLVLASPSGEEHTYALRFNFDVTNNEAEYEALLAGLNIARKMNITKLRAFTDSQ
                     LVANQFNGSFEAHDSSMQKYLQLLKESAEWFEYFELAQVPRSQNKKADALSKLATLTF
                     SHFQKQVWVEELPNKSIDNDLTVASVEEEQPNWMEPILQYIRGDVLPTDKREAHLHYQ
                     YRKSYCVPMMRCVGPIEAEMIVEEVHSGSCALHSGYKTTAAKIMRMGYFWPSLYRDVA
                     KIVKRCKSCQRHAPQNRMPRFGIPRELVSDNGAQIAKDPFKTWCTDLNIIQKFTSVAH
                     PQANGLCAVTNRDIVSERRLMAAIREANNKQQIAKYYNKRVCALSFDVGEWVLRNNDS
                     IRAEKLGKLGPNWEGPYQVVAVNAAGSYKLADMEGRNLPNAWHAALLKRYYA"
     misc_feature    127..378
                     /gene="LOC139841677"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(130..132,136..138,142..144,223..231,367..369)
                     /gene="LOC139841677"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    130..138
                     /gene="LOC139841677"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    130..132
                     /gene="LOC139841677"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(223..234,244..255)
                     /gene="LOC139841677"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
     misc_feature    868..1305
                     /gene="LOC139841677"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(964..981,1066..1071,1150..1152,1156..1161,
                     1291..1296)
                     /gene="LOC139841677"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(964..981,1066..1068,1156..1158)
                     /gene="LOC139841677"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    1069..1071
                     /gene="LOC139841677"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    1501..1797
                     /gene="LOC139841677"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    2011..2382
                     /gene="LOC139841677"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(2026..2037,2125..2133,2140..2142,2212..2214,
                     2332..2334,2374..2376)
                     /gene="LOC139841677"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    2605..2787
                     /gene="LOC139841677"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    <2800..2919
                     /gene="LOC139841677"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgtatcaaa attggcaatt tgtgccaatt agttttccaa aaatgcagag cgaggatttc
       61 tctgaaatgc cgatagttgt atcgtgcaaa atcgcggaaa atggaatcac aaacatgaaa
      121 gttcactttg ataatggtag tagcgttgat attctttacg agcaatgttt tattcaactg
      181 tcggagagta tcagagtaac tttaaaacca accgcggctt cgctgaccgg ttttgcagga
      241 gaatcctcat ttcctatggg tgttttgccc ttagacgttg agcttgttga tgacaatgat
      301 gatggtttag tgcgccgagc gcggatagat ttctatgtta tgcgaacctc atctcgctat
      361 aacatgttgt taggaagaac cgccttaggt aaactcggaa ttgtcccatc tacaattcat
      421 ggcatgatta aatttgcaac gcgaaaaggt gtcgcaacaa taaattcaac aagcaaggtg
      481 cctatttgtg cggctattaa tgtaaaaagt gcagctcaag aaactgcgga agtcacggaa
      541 aatatggtag tggttaatcc tgcgtacccc gagcaaaaaa ttaaagtggg aagtaattta
      601 agtgcggaca cacagaaaca aattgtgcag ttacttgtgc agtacatgga tgtttttact
      661 tggtgtgaaa atgatatgac tggtgttccg cgtaatattg cggaacacgg acttaatgta
      721 aatcccgctt taaatcctgt ggtacagaag cgtagaagca tggccccaga tcgcgtgaag
      781 tggctatgca aagaggtcac aaaattggtg agagctggaa ttttacgcga agcccaatat
      841 caatcatgga ttgcgaatcc agttttggat ttaaataaag catgtcctaa ggataattat
      901 acaattccag aaattgattt aaaagtagaa tcgttgcacg cttttctgta taaatgtttt
      961 ttgaatgcgg caagaggtta tcaccagatc ccaatggctc aagaagatat agacaaaact
     1021 gcttttcata cgggcaaaag catattttcc tatataatga tgccttttgg tttaatcaat
     1081 gcgggtacga catatcaacg tttgattgac accgtgtttg aaaagaaaat tgggtgtaat
     1141 tttgaggctt acgtggacga cttagtaatc aaaagtacaa cgcaggagcg aattatcgaa
     1201 gataggcgcg aaacattcaa tacactgcga aagataaaca tgaagcttaa tccgctaaag
     1261 tgtagttttg gagagaccga aggaaagttt ctgggatacc ttgttacgga acaaggtatt
     1321 caggctaatc caaagaaaat cgcggctatt gaaaatatga tcgcaccaaa aacgattaag
     1381 gaagtgctaa ttttgacggg aaagttagct gcgctaacgc gtttcttgtc taaagctgct
     1441 gaaagacaat tgccattttt taaaacttta aaaggttgct tgaagcaaaa aagttttgtt
     1501 tggacaagcg acgcagaagc tgcatttcaa gaaatgaaga agttgttgaa aactttgcct
     1561 acattaacag cgccaattga tggcgaaatt ctctaccttt atatatcagt ggcaaatgaa
     1621 gcttttggct cagttttaat cgcggaaagg gagaaaatac aaaagcctgt gtattttgtc
     1681 agtaaagctc ttacagggag cgaaataaac tatgcgccga ttgaaaagtt tgtgtacgca
     1741 cttattctaa cgtcgcgaag gttaagaaga tattttcagg ggcatctggt gcatgtgtta
     1801 actaacatgc cagtcaagca agtcttaaca aaaccagaga tatccggtag actcgcgtta
     1861 tgggcggtgg aattaggtgc atatcaaata tcttatcttc tgcaaagtgc tgtaaagggc
     1921 caggttatgg cggattatct cgcagaaata tctggagagt tggaggtgat taatgagcgg
     1981 acagcattaa aaccggtaaa gggtgaaact tgggatttat ttgctgatgg tgcttcatgt
     2041 gcagagggcg caggtgcggg tttggtattg gcaagcccaa gtggcgaaga gcatacgtat
     2101 gcattgcgtt ttaattttga tgtcacaaat aatgaagcag agtatgaagc attacttgct
     2161 ggtttaaata tcgcacgaaa aatgaatatc actaagttgc gggcgtttac agattcgcag
     2221 ttagtggcga atcagtttaa tggttccttt gaagcgcatg actcttcaat gcagaaatat
     2281 ttgcagttat taaaagaatc ggcagagtgg tttgagtatt ttgaactcgc gcaagtgcca
     2341 agaagtcaaa ataagaaggc ggatgcattg agtaaattgg ctactctaac gttttcgcac
     2401 tttcaaaaac aagtttgggt tgaagaattg ccaaacaaat caatagataa cgacttaacg
     2461 gtcgcgtctg ttgaagagga acagccaaat tggatggaac caatcctaca atacattcgc
     2521 ggtgatgttt tgccaactga taagcgcgaa gctcacctac attatcaata tcgcaaatca
     2581 tactgtgttc ctatgatgcg atgtgttgga ccaattgagg cagaaatgat agttgaagaa
     2641 gtgcatagcg gttcttgtgc gttgcattca ggctataaaa ctactgcggc gaaaattatg
     2701 cggatgggtt acttttggcc atcactatat cgcgatgttg cgaaaattgt taagcgatgt
     2761 aaaagttgtc aaaggcatgc tccgcagaat cggatgccga gattcggtat tccgcgcgag
     2821 ttggttagtg ataatggcgc gcaaatagcg aaagatcctt ttaaaacatg gtgcactgat
     2881 ttgaatataa tacaaaagtt tacatcagtg gcgcatccac aggctaacgg attatgcgca
     2941 gtaaccaatc gtgatattgt aagcgagaga aggttaatgg ctgctatcag agaggcaaat
     3001 aacaaacagc aaattgccaa gtattataac aaaagagtgt gtgctttgtc ttttgatgtt
     3061 ggcgaatggg tgttgcgaaa taatgattca attagagcag aaaaacttgg caagctagga
     3121 ccgaattggg agggtcctta tcaagttgtg gcagttaacg cggcaggttc ttataagctt
     3181 gcagatatgg aagggcgaaa tttgcccaat gcatggcatg cggctttatt aaaacgatac
     3241 tatgcgtaa
//
LOCUS       XM_071831881             552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841678), mRNA.
ACCESSION   XM_071831881
VERSION     XM_071831881.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..552
                     /gene="LOC139841678"
                     /note="uncharacterized LOC139841678; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841678"
     CDS             1..552
                     /gene="LOC139841678"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687982.1"
                     /db_xref="GeneID:139841678"
                     /translation="MTPDQRDYVMICEELVLTKLPHTYEYIDLLPIKLRSFDVFIMDC
                     LAPLRARMLCFDKTISIPLENGETLVIQGEKGGSKLNIISCIKTRKYLMKRYQAILAH
                     VKEVEPEEKRIEDVPMVRDFPEVFPEGLPGLHPQRQVEFQIDLTPGAAPIAKAPYRLA
                     PPEMKELSKQLQELLENGFIHPS"
ORIGIN      
        1 atgacgcctg atcaacgtga ttatgttatg atatgcgaag aactcgtttt aaccaaacta
       61 cctcatactt atgagtacat tgacttattg ccgatcaagt tacgaagttt cgatgtattt
      121 ataatggatt gtttagcccc attgagagcg agaatgctat gcttcgataa aactattagt
      181 attcccctag agaatggtga aactctagtc attcaaggtg aaaagggtgg ttccaaactc
      241 aatatcattt catgcatcaa aacccgtaag tatctaatga agagatatca agccatattg
      301 gctcatgtga aggaagtcga accggaagag aaacgcattg aagatgtacc aatggttaga
      361 gactttcccg aagtatttcc tgaaggactc cctggtctcc atcctcaacg acaagtcgag
      421 ttccagatcg atttgacccc gggtgctgca cctattgcaa aggcaccata ccgcttagct
      481 ccacctgaga tgaaagaatt atccaaacaa ctccaagaac ttttggagaa tggtttcatt
      541 catcctagct ag
//
LOCUS       XM_071831882            2401 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor TFIID subunit 15b-like (LOC139841679), transcript variant
            X1, mRNA.
ACCESSION   XM_071831882
VERSION     XM_071831882.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2401
                     /gene="LOC139841679"
                     /note="transcription initiation factor TFIID subunit
                     15b-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841679"
     CDS             182..1618
                     /gene="LOC139841679"
                     /codon_start=1
                     /product="transcription initiation factor TFIID subunit
                     15b-like"
                     /protein_id="XP_071687983.1"
                     /db_xref="GeneID:139841679"
                     /translation="MSGYGYEGDGSAPPPGGGGYGGTGGGYGGGGYGGSGGGGGGYGG
                     SGGRGSYGGNRGSGGGYGGGGGGGGGYGSRGGGREGGGGGGYGGGGGYQGGGDRGRSG
                     GGGGGRGSGGRGGGREGDWPCPNPECNNSNFSWRTECNKCGTPSPAGTGSGGGDRGLS
                     DGVGYNKGGGGRTDGGSYSRGGDRGSRGNYDGVSGGGSRGSGDSYGGRDSGGYGQSAA
                     GGYGGSYGTEAVPPPASYNGGPTSYPPSYGAGTGYAGDSLPESRGGGGRGGSAGGYGG
                     APQSQGGYGGAPQSQGGYGGQPQSQGGYGGQPQSQGGYGGAPAEAPIKVKQCDETCDE
                     SCDNARIYISNLPPDVTVDELRELFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGKN
                     KGDAALVYEDPSAAHSAGGFYNNYELRGHKISVGMAEKSAPRPPPAQGGGGGRSGGYG
                     GSGGGRRDNYRDGGPDRNYHGGNRSRPY"
     misc_feature    542..622
                     /gene="LOC139841679"
                     /note="Zn-finger in Ran binding protein and others;
                     Region: zf-RanBP; pfam00641"
                     /db_xref="CDD:395516"
     misc_feature    542..607
                     /gene="LOC139841679"
                     /note="RanBP2-type Zn finger [structural motif]; Region:
                     RanBP2-type Zn finger"
                     /db_xref="CDD:275376"
     misc_feature    1202..1462
                     /gene="LOC139841679"
                     /note="RNA recognition motif (RRM) found in the FET family
                     of RNA-binding proteins; Region: RRM_FET; cd12280"
                     /db_xref="CDD:409722"
ORIGIN      
        1 cacaaaccat acgagtcggt gagctttggt gaatttaagt cgataggacc aatccatata
       61 ctccgtgtca ttcagtgcct cacctatcaa tcaatccttg tagtatataa ataacgcaaa
      121 ttcgcccttt ctcggtctta caaaacaaac ttaaaaacca acgaaaccct aactccaaac
      181 tatgtccgga tacggttatg aaggagatgg atctgctcca ccgcccggcg gcggtggata
      241 cggcggaact ggcggtggat acggtggtgg tggatacggt ggcagcggtg gtggtggcgg
      301 aggttacgga ggcagtggtg gacgtggatc gtatggcgga aaccgtggaa gtggcggtgg
      361 atatggaggc ggtggtggtg gcggcggcgg ttacggtagt cgtggtggtg gtagagaagg
      421 aggcggcggc ggtggatacg gaggtggagg tggatatcaa ggtggtggag atcgagggcg
      481 cagtggcgga ggtggtggtg gtagaggttc tggtggacga ggtggtggta gagaaggaga
      541 ctggccgtgc cctaatccag agtgtaacaa ctcaaatttt tcgtggagaa ctgaatgcaa
      601 caaatgtggc accccttcac ctgctggaac aggcagcggc ggcggagatc gtggtcttag
      661 tgatggagta ggttacaata aaggcggtgg tgggcgcact gatggtggta gttacagtag
      721 gggtggtgat agaggcagta ggggaaacta cgatggtgtt agtggtggag gtagtagagg
      781 aagtggtgat tcctatggcg gcagagacag cggtggttat ggtcagagtg ctgcaggtgg
      841 atatggtggt tcctatggaa ctgaagctgt cccccctcct gcaagctata atggtgggcc
      901 cacttcatat ccaccatctt atggtgctgg tactggttat gctggcgatt ctttgcccga
      961 aagtcgcggt ggtggtggtc ggggtggttc agctggtggg tatggtggtg ctccacagag
     1021 tcaaggtggt tatggtggtg ctccacagag tcaaggtggt tatggtggtc aaccacagag
     1081 tcaaggtggt tatggtggtc aaccacagag tcaaggtggt tatggtggtg ctcctgctga
     1141 agcacctata aaggttaagc agtgtgatga aacttgtgac gaatcctgtg acaacgcacg
     1201 tatctacatt tcgaatttgc ccccagatgt gactgttgat gaattgagag agctattcgg
     1261 aggcattgga caggttggaa gaattaagca gaagcgaggc tataaggacc agtggcctta
     1321 taacattaag atttacaccg atgaaaaagg aaaaaacaaa ggtgatgctg cgttggtcta
     1381 cgaggatcct tctgcagcac attctgctgg cgggttttac aacaattatg agctgagagg
     1441 tcacaaaatt agcgttggaa tggctgagaa atcggctcca aggcctcctc ccgcgcaagg
     1501 tggtggcggt ggaagaagtg gcggctacgg tggcagtggt ggtggacgca gagacaacta
     1561 cagagatggt ggtccggata ggaattatca tggtggaaac cggtctcgtc catattgatt
     1621 ttcacatgag ctgagcaaga atataattag taaaactgtg aacaaaagag aagacattat
     1681 tgtagttgat tgcaggggga ttgttccctt accaggagat taagaggtag gttatctact
     1741 tacttacccc ttttctcctc tcctttttta accttttcaa aatgtcttga gttgggatta
     1801 ttattatatt aatctaaatg aattgtgtca atgtttttat agaggccagt gccaagtgga
     1861 tcatgatata tgtactccaa atgcttctat aaggtaggtt tgagattttc aggtgagtgt
     1921 tgtttttgga tattatgcag atagcactag ataaacgcga ttcatttgtg tgattgttat
     1981 aacttcttac atatgcatca tatcatggtg atcatttatt acactagtta aacctttagg
     2041 gggtatagtt tgtcaaaaag atgctgcctt ttcttattct actagtttaa attaactata
     2101 ctaggggtcc caaactgggt ttaaaacggc tctgtttggc ctcaaaccct ttttgacatc
     2161 acatccactt ttggtctggt ctaaagttaa agttaaatcg ctaaacataa tgaagcatgc
     2221 acttgtaagc actcatcgga cacttgttct gattatcgta aatatatata ttgtgtcgaa
     2281 ccatctgttg tgggctttca tgtcgaggat gaagttaatc ggttgtttta acatttgagg
     2341 tatcaagatt ggtgctttat ggtattagat atccaatcgt tttttgtttc ttttattatt
     2401 g
//
LOCUS       XR_011757421            2095 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor TFIID subunit 15b-like (LOC139841679), transcript variant
            X2, misc_RNA.
ACCESSION   XR_011757421
VERSION     XR_011757421.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2095
                     /gene="LOC139841679"
                     /note="transcription initiation factor TFIID subunit
                     15b-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841679"
     misc_RNA        1..2095
                     /gene="LOC139841679"
                     /product="transcription initiation factor TFIID subunit
                     15b-like, transcript variant X2"
                     /db_xref="GeneID:139841679"
ORIGIN      
        1 cacaaaccat acgagtcggt gagctttggt gaatttaagt cgataggacc aatccatata
       61 ctccgtgtca ttcagtgcct cacctatcaa tcaatccttg tagtatataa ataacgcaaa
      121 ttcgcccttt ctcggtctta caaaacaaac ttaaaaacca acgaaaccct aactccaaac
      181 tatgtccgga tacggttatg aaggagatgg atctgctcca ccgcccggcg gcggtggata
      241 cggcggaact ggcggtggat acggtggtgg tggatacggt ggcagcggtg gtggtggcgg
      301 aggttacgga ggcagtggtg gacgtggatc gtatggcgga aaccgtggaa gtggcggtgg
      361 atatggaggc ggtggtggtg gcggcggcgg ttacggtagt cgtggtggtg gtagagaagg
      421 aggcggcggc ggtggatacg gaggtggagg tggatatcaa ggtggtggag atcgagggcg
      481 cagtggcgga ggtggtggtg gtagaggttc tggtggacga ggtggtggta gagaaggaga
      541 ctggccgtgc cctaatccag agtgtaacaa ctcaaatttt tcgtggagaa ctgaatgcaa
      601 caaatgtggc accccttcac ctgctggaac aggcagcggc ggcggagatc gtggtcttag
      661 tgatggagta ggttacaata aaggcggtgg tgggcgcact gatggtggta gttacagtag
      721 gggtggtgat agaggcagta ggggaaacta cgatggtgtt agtggtggag gtagtagagg
      781 aagtggtgat tcctatggcg gcagagacag cggtggttat ggtcagagtg ctgcaggtgg
      841 atatggtggt tcctatggaa ctgaagctgt cccccctcct gcaagctata atggtgggcc
      901 cacttcatat ccaccatctt atggtgctgg tactggttat gctggcgatt ctttgcccga
      961 aagtcgcggt ggtggtggtc ggggtggttc agctggtggg tatggtggtg ctccacagag
     1021 tcaaggtggt tatggtggtg ctccacagag tcaaggtggt tatggtggtc aaccacagag
     1081 tcaaggtggt tatggtggtc aaccacagag tcaaggtggt tatggtggtg ctcctgctga
     1141 agcacctata aaggttaagc agtgtgatga aacttgtgac gaatcctgtg acaacgcacg
     1201 tatctacatt tcgaatttgc ccccagatgt gactgttgat gaattgagag agctattcgg
     1261 aggcattgga caggttggaa gaattaagca gaagcgaggc tataaggacc agtggcctta
     1321 taacattaag atttacaccg atgaaaaagg aaaaaacaaa ggtgatgctg cgttggtcta
     1381 cgaggatcct tctgcagcac attctgctgg cgggttttac aacaattatg agctgagagg
     1441 tcacaaaatt agcgttggaa tggctgagaa atcggctcca aggcctcctc ccgcgcaagg
     1501 tggtggcggt ggaagaagtg gcggctacgg tggcagtggt ggtggacgca gagacaacta
     1561 cagagatggt ggtccggata ggaattatca tggtggaaac cggtctcgtc catattgatt
     1621 ttcacatgag ctgagcaaga atataattag taaaactgtg aacaaaagag aagacattat
     1681 tgtagttgat tgcaggggga ttgttccctt accaggagat taagaggtag gttatctact
     1741 tacttacccc ttttctcctc tcctttttta accttttcaa aatgtcttga gttgggatta
     1801 ttattatatt aatctaaatg aattgtgtca atgtttttat agaggccagt gccaagtgga
     1861 tcatgatata tgtactccaa atgcttctat aagggaggga acggagaagg attatcttga
     1921 agagggttaa tgactggaat aacttgctaa tgactctttc cgcccttaag tttataattt
     1981 gtaaaaagtt atatatgatt aagtataaac atgtcatcct ttactctcaa tcatgtttta
     2041 aactcaattt gtgatttgtg aatcagtagt ttattatcca ttgaacgact cgggt
//
LOCUS       XR_011757422            2285 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor TFIID subunit 15b-like (LOC139841679), transcript variant
            X3, misc_RNA.
ACCESSION   XR_011757422
VERSION     XR_011757422.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2285
                     /gene="LOC139841679"
                     /note="transcription initiation factor TFIID subunit
                     15b-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841679"
     misc_RNA        1..2285
                     /gene="LOC139841679"
                     /product="transcription initiation factor TFIID subunit
                     15b-like, transcript variant X3"
                     /db_xref="GeneID:139841679"
ORIGIN      
        1 cacaaaccat acgagtcggt gagctttggt gaatttaagt cgataggacc aatccatata
       61 ctccgtgtca ttcagtgcct cacctatcaa tcaatccttg tagtatataa ataacgcaaa
      121 ttcgcccttt ctcggtctta caaaacaaac ttaaaaacca acgaaaccct aactccaaac
      181 tatgtccgga tacggttatg aaggagatgg atctgctcca ccgcccggcg gcggtggata
      241 cggcggaact ggcggtggat acggtggtgg tggatacggt ggcagcggtg gtggtggcgg
      301 aggttacgga ggcagtggtg gacgtggatc gtatggcgga aaccgtggaa gtggcggtgg
      361 atatggaggc ggtggtggtg gcggcggcgg ttacggtagt cgtggtggtg gtagagaagg
      421 aggcggcggc ggtggatacg gaggtggagg tggatatcaa ggtggtggag atcgagggcg
      481 cagtggcgga ggtggtggtg gtagaggttc tggtggacga ggtggtggta gagaaggaga
      541 ctggccgtgc cctaatccag agtgtaacaa ctcaaatttt tcgtggagaa ctgaatgcaa
      601 caaatgtggc accccttcac ctgctggaac aggcagcggc ggcggagatc gtggtcttag
      661 tgatggagta ggttacaata aaggcggtgg tgggcgcact gatggtggta gttacagtag
      721 gggtggtgat agaggcagta ggggaaacta cgatggtgtt agtggtggag gtagtagagg
      781 aagtggtgat tcctatggcg gcagagacag cggtggttat ggtcagagtg ctgcaggtgg
      841 atatggtggt tcctatggaa ctgaagctgt cccccctcct gcaagctata atggtgggcc
      901 cacttcatat ccaccatctt atggtgctgg tactggttat gctggcgatt ctttgcccga
      961 aagtcgcggt ggtggtggtc ggggtggttc agctggtggg tatggtggtg ctccacagag
     1021 tcaaggtggt tatggtggtg ctccacagag tcaaggtggt tatggtggtc aaccacagag
     1081 tcaaggtggt tatggtggtc aaccacagag tcaaggtggt tatggtggtg ctcctgctga
     1141 agcacctata aaggttaagc agtgtgatga aacttgtgac gaatcctgtg acaacgcacg
     1201 tatctacatt tcgaatttgc ccccagatgt gactgttgat gaattgagag agctattcgg
     1261 aggcattgga caggttggaa gaattaagca gaagcgaggc tataaggacc agtggcctta
     1321 taacattaag atttacaccg atgaaaaagg aaaaaacaaa ggtgatgctg cgttggtcta
     1381 cgaggatcct tctgcagcac attctgctgg cgggttttac aacaattatg agctgagagg
     1441 tcacaaaatt agcgttggaa tggctgagaa atcggctcca aggcctcctc ccgcgcaagg
     1501 tggtggcggt ggaagaagtg gcggctacgg tggcagtggt ggtggacgca gagacaacta
     1561 cagagatggt ggtccggata ggaattatca tggtggaaac cggtctcgtc catattgatt
     1621 ttcacatgag ctgagcaaga atataattag taaaactgtg aacaaaagag aagacattat
     1681 tgtagttgat tgcaggggga ttgttccctt accaggagat taagagaggc cagtgccaag
     1741 tggatcatga tatatgtact ccaaatgctt ctataaggta ggtttgagat tttcaggtga
     1801 gtgttgtttt tggatattat gcagatagca ctagataaac gcgattcatt tgtgtgattg
     1861 ttataacttc ttacatatgc atcatatcat ggtgatcatt tattacacta gttaaacctt
     1921 tagggggtat agtttgtcaa aaagatgctg ccttttctta ttctactagt ttaaattaac
     1981 tatactaggg gtcccaaact gggtttaaaa cggctctgtt tggcctcaaa ccctttttga
     2041 catcacatcc acttttggtc tggtctaaag ttaaagttaa atcgctaaac ataatgaagc
     2101 atgcacttgt aagcactcat cggacacttg ttctgattat cgtaaatata tatattgtgt
     2161 cgaaccatct gttgtgggct ttcatgtcga ggatgaagtt aatcggttgt tttaacattt
     2221 gaggtatcaa gattggtgct ttatggtatt agatatccaa tcgttttttg tttcttttat
     2281 tattg
//
LOCUS       XR_011757423            1979 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor TFIID subunit 15b-like (LOC139841679), transcript variant
            X4, misc_RNA.
ACCESSION   XR_011757423
VERSION     XR_011757423.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1979
                     /gene="LOC139841679"
                     /note="transcription initiation factor TFIID subunit
                     15b-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841679"
     misc_RNA        1..1979
                     /gene="LOC139841679"
                     /product="transcription initiation factor TFIID subunit
                     15b-like, transcript variant X4"
                     /db_xref="GeneID:139841679"
ORIGIN      
        1 cacaaaccat acgagtcggt gagctttggt gaatttaagt cgataggacc aatccatata
       61 ctccgtgtca ttcagtgcct cacctatcaa tcaatccttg tagtatataa ataacgcaaa
      121 ttcgcccttt ctcggtctta caaaacaaac ttaaaaacca acgaaaccct aactccaaac
      181 tatgtccgga tacggttatg aaggagatgg atctgctcca ccgcccggcg gcggtggata
      241 cggcggaact ggcggtggat acggtggtgg tggatacggt ggcagcggtg gtggtggcgg
      301 aggttacgga ggcagtggtg gacgtggatc gtatggcgga aaccgtggaa gtggcggtgg
      361 atatggaggc ggtggtggtg gcggcggcgg ttacggtagt cgtggtggtg gtagagaagg
      421 aggcggcggc ggtggatacg gaggtggagg tggatatcaa ggtggtggag atcgagggcg
      481 cagtggcgga ggtggtggtg gtagaggttc tggtggacga ggtggtggta gagaaggaga
      541 ctggccgtgc cctaatccag agtgtaacaa ctcaaatttt tcgtggagaa ctgaatgcaa
      601 caaatgtggc accccttcac ctgctggaac aggcagcggc ggcggagatc gtggtcttag
      661 tgatggagta ggttacaata aaggcggtgg tgggcgcact gatggtggta gttacagtag
      721 gggtggtgat agaggcagta ggggaaacta cgatggtgtt agtggtggag gtagtagagg
      781 aagtggtgat tcctatggcg gcagagacag cggtggttat ggtcagagtg ctgcaggtgg
      841 atatggtggt tcctatggaa ctgaagctgt cccccctcct gcaagctata atggtgggcc
      901 cacttcatat ccaccatctt atggtgctgg tactggttat gctggcgatt ctttgcccga
      961 aagtcgcggt ggtggtggtc ggggtggttc agctggtggg tatggtggtg ctccacagag
     1021 tcaaggtggt tatggtggtg ctccacagag tcaaggtggt tatggtggtc aaccacagag
     1081 tcaaggtggt tatggtggtc aaccacagag tcaaggtggt tatggtggtg ctcctgctga
     1141 agcacctata aaggttaagc agtgtgatga aacttgtgac gaatcctgtg acaacgcacg
     1201 tatctacatt tcgaatttgc ccccagatgt gactgttgat gaattgagag agctattcgg
     1261 aggcattgga caggttggaa gaattaagca gaagcgaggc tataaggacc agtggcctta
     1321 taacattaag atttacaccg atgaaaaagg aaaaaacaaa ggtgatgctg cgttggtcta
     1381 cgaggatcct tctgcagcac attctgctgg cgggttttac aacaattatg agctgagagg
     1441 tcacaaaatt agcgttggaa tggctgagaa atcggctcca aggcctcctc ccgcgcaagg
     1501 tggtggcggt ggaagaagtg gcggctacgg tggcagtggt ggtggacgca gagacaacta
     1561 cagagatggt ggtccggata ggaattatca tggtggaaac cggtctcgtc catattgatt
     1621 ttcacatgag ctgagcaaga atataattag taaaactgtg aacaaaagag aagacattat
     1681 tgtagttgat tgcaggggga ttgttccctt accaggagat taagagaggc cagtgccaag
     1741 tggatcatga tatatgtact ccaaatgctt ctataaggga gggaacggag aaggattatc
     1801 ttgaagaggg ttaatgactg gaataacttg ctaatgactc tttccgccct taagtttata
     1861 atttgtaaaa agttatatat gattaagtat aaacatgtca tcctttactc tcaatcatgt
     1921 tttaaactca atttgtgatt tgtgaatcag tagtttatta tccattgaac gactcgggt
//
LOCUS       XR_011757424            1928 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription initiation
            factor TFIID subunit 15b-like (LOC139841679), transcript variant
            X5, misc_RNA.
ACCESSION   XR_011757424
VERSION     XR_011757424.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1928
                     /gene="LOC139841679"
                     /note="transcription initiation factor TFIID subunit
                     15b-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841679"
     misc_RNA        1..1928
                     /gene="LOC139841679"
                     /product="transcription initiation factor TFIID subunit
                     15b-like, transcript variant X5"
                     /db_xref="GeneID:139841679"
ORIGIN      
        1 cacaaaccat acgagtcggt gagctttggt gaatttaagt cgataggacc aatccatata
       61 ctccgtgtca ttcagtgcct cacctatcaa tcaatccttg tagtatataa ataacgcaaa
      121 ttcgcccttt ctcggtctta caaaacaaac ttaaaaacca acgaaaccct aactccaaac
      181 tatgtccgga tacggttatg aaggagatgg atctgctcca ccgcccggcg gcggtggata
      241 cggcggaact ggcggtggat acggtggtgg tggatacggt ggcagcggtg gtggtggcgg
      301 aggttacgga ggcagtggtg gacgtggatc gtatggcgga aaccgtggaa gtggcggtgg
      361 atatggaggc ggtggtggtg gcggcggcgg ttacggtagt cgtggtggtg gtagagaagg
      421 aggcggcggc ggtggatacg gaggtggagg tggatatcaa ggtggtggag atcgagggcg
      481 cagtggcgga ggtggtggtg gtagaggttc tggtggacga ggtggtggta gagaaggaga
      541 ctggccgtgc cctaatccag agtgtaacaa ctcaaatttt tcgtggagaa ctgaatgcaa
      601 caaatgtggc accccttcac ctgctggaac aggcagcggc ggcggagatc gtggtcttag
      661 tgatggagta ggttacaata aaggcggtgg tgggcgcact gatggtggta gttacagtag
      721 gggtggtgat agaggcagta ggggaaacta cgatggtgtt agtggtggag gtagtagagg
      781 aagtggtgat tcctatggcg gcagagacag cggtggttat ggtcagagtg ctgcaggtgg
      841 atatggtggt tcctatggaa ctgaagctgt cccccctcct gcaagctata atggtgggcc
      901 cacttcatat ccaccatctt atggtgctgg tactggttat gctggcgatt ctttgcccga
      961 aagtcgcggt ggtggtggtc ggggtggttc agctggtggg tatggtggtg ctccacagag
     1021 tcaaggtggt tatggtggtg ctccacagag tcaaggtggt tatggtggtc aaccacagag
     1081 tcaaggtggt tatggtggtc aaccacagag tcaaggtggt tatggtggtg ctcctgctga
     1141 agcacctata aaggttaagc agtgtgatga aacttgtgac gaatcctgtg acaacgcacg
     1201 tatctacatt tcgaatttgc ccccagatgt gactgttgat gaattgagag agctattcgg
     1261 aggcattgga caggttggaa gaattaagca gaagcgaggc tataaggacc agtggcctta
     1321 taacattaag atttacaccg atgaaaaagg aaaaaacaaa ggtgatgctg cgttggtcta
     1381 cgaggatcct tctgcagcac attctgctgg cgggttttac aacaattatg agctgagagg
     1441 tcacaaaatt agcgttggaa tggctgagaa atcggctcca aggcctcctc ccgcgcaagg
     1501 tggtggcggt ggaagaagtg gcggctacgg tggcagtggt ggtggacgca gagacaacta
     1561 cagagatggt ggtccggata ggaattatca tggtggaaac cggtctcgtc catattgatt
     1621 ttcacatgag ctgagcaaga atataattag taaaactgtg aacaaaagag aagacattat
     1681 tgtagttgat tgcaggggga ttgttccctt accaggagat taagagggag ggaacggaga
     1741 aggattatct tgaagagggt taatgactgg aataacttgc taatgactct ttccgccctt
     1801 aagtttataa tttgtaaaaa gttatatatg attaagtata aacatgtcat cctttactct
     1861 caatcatgtt ttaaactcaa tttgtgattt gtgaatcagt agtttattat ccattgaacg
     1921 actcgggt
//
LOCUS       XM_071831884            1644 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841681), mRNA.
ACCESSION   XM_071831884
VERSION     XM_071831884.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1644
                     /gene="LOC139841681"
                     /note="uncharacterized LOC139841681; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841681"
     CDS             1..1644
                     /gene="LOC139841681"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687985.1"
                     /db_xref="GeneID:139841681"
                     /translation="MPICTAVNVKSAGQEIADDADNMEIISPAYPEHKIKVGRNVSAD
                     TRKQIVQLLVQYKDVFAWCENDMTGVPRHIAEQRLNVNPTLKPVVQKRRGMAPDRVKW
                     LCDEVTKLVRAGILREVQYQSWIANPVLVKKPDAYIDDLVIKSTTQEQIIEDMRETFD
                     TLRNINMKLNPLKCSFGETEGKFLGYLVTEQGIQANPKKIAAIENMTAPRTVKEVQSL
                     TGKLAALTRFLSKAAERQLPFFKTLKGCLKQKSFVWSSEAETAFQEMKKLLKTLPTLT
                     APVDGEILYLYISMANEAFGSVLITERNKIQNPVYFIKQVLTKPEISGRLALWAVELD
                     AYQISYLPRSAVKGQVMVDYLAEMSGELEVVNERTALKSAEYEALLAGLNISRKMNIT
                     KLRAFTDSQLVANQFNGSFEAHDPSIQKYLQLLKEMAACFEHFELAQVPRSQNKKADA
                     LSKLAALTFSHFQKQVWVEELPSKSADSDLMVASITEVQPNWMEPILQYIRNDILPDD
                     SREARLVREPAPMLQNYRSKNYAYGILLAIPIPRRGENC"
     misc_feature    <367..564
                     /gene="LOC139841681"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    760..>963
                     /gene="LOC139841681"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    <1120..1368
                     /gene="LOC139841681"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgcccattt gtacggctgt taacgtaaaa agtgcaggac aagaaatcgc tgatgatgca
       61 gataatatgg aaataattag tcctgcatat cctgaacata aaattaaagt gggacgcaat
      121 gttagtgcgg acactagaaa acaaattgta caattacttg ttcagtacaa ggatgttttc
      181 gcttggtgcg aaaatgatat gaccggtgtt ccacgacata ttgcggaaca aaggctcaat
      241 gtaaatccaa ccctaaaacc tgtagtacaa aagcgaaggg gtatggcccc agatcgcgta
      301 aaatggctgt gcgatgaggt aacaaaattg gtgagggctg gaatattgcg cgaagttcaa
      361 taccaatcat ggatcgcgaa tccagtgttg gtgaaaaaac ctgatgccta tatagatgat
      421 ttggtgataa aaagcacaac gcaagagcag attattgaag atatgcgcga aacatttgat
      481 acactgcgaa atataaacat gaagcttaat ccgctaaaat gcagttttgg tgaaactgaa
      541 ggaaagtttt tgggatatct tgttacagag caaggtattc aggctaatcc aaaaaagatt
      601 gcggctattg aaaacatgac cgcaccaaga acggttaaag aggtgcaaag tttgacagga
      661 aaactggccg cgttaacgcg ttttttgtct aaagctgccg aaaggcagtt gccgtttttc
      721 aaaactctaa aaggttgttt gaagcaaaaa agttttgttt ggtccagtga agcagaaact
      781 gcatttcaag aaatgaaaaa gttgttgaaa accttgccta ccctaacagc gccagttgat
      841 ggcgaaattc tttatcttta tatatccatg gcaaatgaag cttttggttc agttttgatc
      901 acggaaagga ataaaataca aaatccggtg tattttatca agcaagtctt aacaaagcca
      961 gaaatatctg gtagactcgc attatgggca gtagagttag atgcctatca aatatcttac
     1021 cttccgcgta gcgctgtaaa aggtcaggtt atggtagatt atctcgctga aatgtctgga
     1081 gagttggagg tggtcaatga gagaaccgcg ttaaaatcgg cagaatatga agcattgctt
     1141 gctggtttaa atatctcgcg aaaaatgaat attactaagt tgcgtgcatt tacagattcg
     1201 cagttagtag cgaatcagtt taatggctct tttgaagcac atgatccttc tatacagaaa
     1261 tacttacagt tattgaaaga aatggcagcg tgtttcgagc attttgaact tgcgcaagtg
     1321 ccaagaagtc aaaacaagaa ggcggatgct ttgagcaaat tggccgcttt aacgttttcg
     1381 cactttcaaa aacaagtatg ggttgaggaa ttaccaagta agtcagcaga tagtgactta
     1441 atggtcgcat ctattacaga agtacagcca aattggatgg agccaatcct gcaatatatc
     1501 cgcaatgata ttctgccaga tgatagccgc gaagctcgtt tagtaagaga gccggcacca
     1561 atgctacaaa actatcgcag taaaaattat gcgtatggga tacttttagc catccctata
     1621 ccgcgacgtg gcgaaaattg ttaa
//
LOCUS       XM_071831885             459 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139841682), mRNA.
ACCESSION   XM_071831885
VERSION     XM_071831885.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..459
                     /gene="LOC139841682"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841682"
     CDS             1..459
                     /gene="LOC139841682"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071687986.1"
                     /db_xref="GeneID:139841682"
                     /translation="MFVQLYDMKFIPFTGIDNHKKCVTFGAALLAKEDADSYKWLCEA
                     FKKAFPEEPQIVLTDHDSSMIVAIEVVFKKARHRLCMWHVTEKITNKIGPAISNVSFK
                     DSISQIVWTDKLDPDDFDKRWFSIVARYKLEDNEWLNEMFKQEKMDTSLF"
     misc_feature    <16..>438
                     /gene="LOC139841682"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgtttgttc aactatatga tatgaagttc ataccattta ctggtattga taaccataag
       61 aagtgtgtta cttttggtgc tgcgttatta gcaaaagaag atgcggattc gtataagtgg
      121 ttatgtgaag cttttaagaa agcattcccc gaagaaccgc aaatagtatt gactgatcat
      181 gattcctcca tgatagttgc tattgaagtt gtttttaaga aagcaagaca cagactttgt
      241 atgtggcatg taactgagaa aattacaaac aagattggtc ctgctatttc aaatgtgagt
      301 tttaaagatt ctatttctca aattgtctgg actgacaagt tagaccctga tgattttgat
      361 aaaagatggt tctcaattgt ggcacgttat aaattagaag ataacgagtg gttaaatgaa
      421 atgtttaaac aggagaaaat ggataccagt ctattttaa
//
LOCUS       XM_071831886            1389 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841683), mRNA.
ACCESSION   XM_071831886
VERSION     XM_071831886.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1389
                     /gene="LOC139841683"
                     /note="uncharacterized LOC139841683; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841683"
     CDS             1..1389
                     /gene="LOC139841683"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687987.1"
                     /db_xref="GeneID:139841683"
                     /translation="MVLSIRNTTTNRALEAIDALDKLSDNEEVEQIPRAPRRYLHRDR
                     QGRAMALWNDYFSDNPTFPDDYFRNRYRMSKPRFLRICQGILNFSQTPVPKYFSYFIQ
                     KRDATGLLGFNIVQKVTSAIRQLAYAASADVFDEYLHMGEQTSYDCLNNFCKCIFHLY
                     GPEYLRRPTAQDVQRLTTKHAQIHGFPGMLGSIDCMHWRWRNCPARWKGHYTRGDHGY
                     PSIMLEAVASYDGWFWHAIFGTAGSNNDINVLNQSDLFSELLAGEAPPCTYTVNGCTF
                     TKGYYLADGIYPEWSTIVKSFKNSINPKQKKFKRYQESARKDIERAFGILQGRWQIVQ
                     RPARPYYIRKIRRILLSCVILNNMITEDNGRAFCGLKENYRPVRRPTRSFQERVQAHM
                     RMDAEIRDAGIHQLLKHMLVEHIHNLPSNYRIRHDPTRNPNNQDDAGPSHIPDDEDEE
                     DHEEDQEDDDEE"
     misc_feature    487..1092
                     /gene="LOC139841683"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggtattat cgatcagaaa tacgactacg aatcgagcac tcgaagccat tgacgcgcta
       61 gataaattaa gtgataacga agaagtagaa caaataccac gggcacctag aagatattta
      121 catagagatc gtcagggtcg tgcaatggct ttatggaatg attatttctc cgacaatccc
      181 acatttccgg acgattattt tcgtaatcgt tatcgaatga gcaaacctcg atttcttcgt
      241 atttgtcaag gtatattgaa cttttctcaa actccggttc ctaaatattt tagttatttt
      301 attcaaaaac gtgatgctac cggattactt ggttttaata ttgttcaaaa agtaacctcc
      361 gccatacgtc aactagctta tgccgcttcg gccgatgttt ttgatgagta tttgcatatg
      421 ggtgaacaaa cctcatatga ttgtttaaac aatttttgca aatgtatttt ccacttgtac
      481 ggtcccgaat atttgagacg accaactgca caagatgtgc aacgtttgac cactaaacat
      541 gcacaaatac atggttttcc ggggatgtta ggaagtattg attgtatgca ttggagatgg
      601 agaaattgtc cggcacgttg gaagggtcat tatacacgag gtgaccatgg ttacccgtca
      661 attatgcttg aagcggtagc atcgtacgat ggatggtttt ggcacgcgat ttttggaact
      721 gccggatcaa acaatgatat caacgtgcta aatcaatccg acttgtttag tgagttatta
      781 gccggtgaag caccaccatg tacgtatacg gttaacggat gtacgtttac taagggttat
      841 tatttggcgg atggaattta cccggaatgg tctacaatag ttaagtcgtt caaaaattcg
      901 ataaacccaa aacaaaaaaa attcaaaagg tatcaagaat cggcaagaaa agatattgaa
      961 cgagcatttg gaatactaca aggccgatgg caaattgttc aacgtccggc acgaccgtat
     1021 tatatccgca aaattagaag gattttgttg tcatgtgtga tattaaataa tatgataacc
     1081 gaggacaacg gccgtgcatt ttgtggactc aaggagaatt atcgtccggt tcgacgacca
     1141 acgagatcat tccaagaaag ggttcaagcg catatgcgaa tggacgcgga aataagagat
     1201 gcgggcattc atcaactact aaaacatatg cttgtagaac acatacataa tcttccatca
     1261 aattatcgca tacgacatga tcccacaaga aatccaaaca accaagatga tgccggacct
     1321 tcacacattc ccgatgacga agatgaagaa gatcacgaag aagatcaaga agacgacgat
     1381 gaagaatag
//
LOCUS       XM_071831887             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides two-component response
            regulator ARR2-like (LOC139841685), mRNA.
ACCESSION   XM_071831887
VERSION     XM_071831887.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139841685"
                     /note="two-component response regulator ARR2-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841685"
     CDS             1..567
                     /gene="LOC139841685"
                     /codon_start=1
                     /product="two-component response regulator ARR2-like"
                     /protein_id="XP_071687988.1"
                     /db_xref="GeneID:139841685"
                     /translation="MSADDSKSVVMKGVTHGACDYLIQPVRVEALRNIWQDMVRKKKH
                     EWKDFESSASADGIIGKKTKRRKEKEDEADERDDSSSLKKPRVVWCVELHQQKLAVVG
                     IDKAVPKKILELMNVPGLTRENVASHFQTFHPHNSKNLVQNYRLYRRRLSGSQHPSGM
                     TAGFIGGPNAVYGSISSLSGLDPQALAM"
     misc_feature    <1..108
                     /gene="LOC139841685"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     Region: REC; cl19078"
                     /db_xref="CDD:473134"
     misc_feature    order(52..63,67..69)
                     /gene="LOC139841685"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:381121"
     misc_feature    250..396
                     /gene="LOC139841685"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cl21498"
                     /db_xref="CDD:473887"
ORIGIN      
        1 atgtcagctg atgacagcaa gagtgtagtt atgaaaggtg ttactcatgg ggcatgtgat
       61 tatttaattc agcccgttcg tgtcgaggca ttacgtaata tatggcaaga catggttcga
      121 aaaaagaaac acgagtggaa agattttgag tcgtcagcca gtgctgatgg cataattgga
      181 aaaaaaacaa aaaggcgaaa agaaaaggag gatgaagctg atgaacgaga cgattcttct
      241 tcactaaaga agcctcgagt tgtttggtgc gttgaactcc atcaacaaaa attggcagtt
      301 gttggaatcg ataaggctgt cccaaaaaag atcctcgagt tgatgaatgt tcccggacta
      361 actcgagaaa atgttgccag ccactttcaa acgtttcatc ctcataactc caagaatttg
      421 gtgcagaatt accgtcttta tcgtagaaga ctgagcggat cacagcatcc aagtggaatg
      481 acagctggtt ttattggtgg gcccaatgca gtttacggtt caatatcatc actcagtgga
      541 cttgatcccc aagcactagc tatgtag
//
LOCUS       XM_071831888             384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841686), mRNA.
ACCESSION   XM_071831888
VERSION     XM_071831888.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..384
                     /gene="LOC139841686"
                     /note="uncharacterized LOC139841686; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841686"
     CDS             1..384
                     /gene="LOC139841686"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687989.1"
                     /db_xref="GeneID:139841686"
                     /translation="MIPAEIFVPTHRVDNFDETTNNDALCENLNFVEECRLMAAIKEA
                     NNKQQIVKYYNKKVCALAFDVGEWVLRNNEASRVKNVGKLGPNWEGPYQIIAINAVGS
                     YKLADIERRIIPNAWHATLLKRYYA"
ORIGIN      
        1 atgattcctg cagaaatttt tgtgccaaca catagggttg acaattttga tgagactacg
       61 aataatgatg cattgtgtga aaatttgaat tttgtggagg aatgcagatt aatggctgcg
      121 ataaaagaag cgaataataa gcaacagatt gtaaaatatt ataacaaaaa ggtgtgtgct
      181 ttagcctttg atgttggaga gtgggttttg cgtaacaatg aagcaagccg tgtaaaaaat
      241 gttggtaaat tgggacccaa ttgggaaggt ccctaccaaa taattgcaat aaacgcggtt
      301 ggttcctaca agctcgcaga cattgaaaga agaatcatcc ctaatgcatg gcacgctacg
      361 ctgttaaaaa gatattacgc ataa
//
LOCUS       XM_071831890            1617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UDP-glycosyltransferase
            87A2-like (LOC139841687), mRNA.
ACCESSION   XM_071831890
VERSION     XM_071831890.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1617
                     /gene="LOC139841687"
                     /note="UDP-glycosyltransferase 87A2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139841687"
     CDS             119..1465
                     /gene="LOC139841687"
                     /codon_start=1
                     /product="UDP-glycosyltransferase 87A2-like"
                     /protein_id="XP_071687991.1"
                     /db_xref="GeneID:139841687"
                     /translation="MCCHVVAIPYPGRGHINPLMNLCKLIALRRPLDFIITFIVTEEW
                     LGIIGSEPKPDNIRFATIPNVIPSEVNRAADFPGFLRATQTNMVDPVKQLLDTMKVPI
                     SVVIYDIYLKWVTNLGSQLNIPVAALFPMSATVFSMSYHYNLLVQNGHVGSNYSEKGE
                     EIIDYLPGVPPIRVADLVTSFNGKGKEVLPLALEAILMAAKTQFLLFVSIYELESRVI
                     DVLRSEFPIPVYAIGPAIPYFKLPSVQNDQNPPDYIKWLDKQPGESVLYISQGSFLSV
                     SNAQLEEIIEGVHESGVRYMWIARGETSRFKHENDEKGIVIPWCDQLRVLSHGSIGAF
                     WSHCGWSSTKEGAFCGVPMLTFPIFWDQVPNSKMIVEDWKIGKRVMIEEGVLVTREVI
                     IKLVKSFMDVESEEGKEMRKRAKEISTICRRAMEEGGSAQIDIDSFVNDIATSHYH"
     misc_feature    125..1453
                     /gene="LOC139841687"
                     /note="UDP-glycosyltransferase family protein; Region:
                     PLN02448"
                     /db_xref="CDD:215247"
     misc_feature    order(158..163,167..169,626..628,635..640,650..652,
                     731..733,932..934,1127..1129,1133..1135,1139..1144,
                     1151..1153)
                     /gene="LOC139841687"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(158..160,932..934,1127..1129,1133..1135,1139..1144)
                     /gene="LOC139841687"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    161..163
                     /gene="LOC139841687"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 tcgtacagag tatatcatga ggttcaggtt tactccaaaa taacatcaag aagataagct
       61 cataatacta tccaaacttc atttctactt tcacaaaatt ttagttcggg cagacaccat
      121 gtgctgccac gtggtcgcca taccgtaccc cggccgcggc cacatcaacc ccctgatgaa
      181 tctttgcaag ctaatcgctc ttcgccgccc tttagatttt atcataacgt tcattgtaac
      241 cgaagaatgg ttaggaatca ttgggtccga gcccaaaccg gataacatcc ggttcgctac
      301 cattcccaat gtcatcccat ctgaagtgaa ccgggctgct gatttcccgg gttttttgag
      361 ggccacacaa acgaatatgg tagatccggt caagcaactt cttgacacga tgaaggttcc
      421 tataagtgta gttatatatg atatttatct taaatgggta acgaatttag ggagtcaact
      481 gaatattcct gtagccgcat tgtttcctat gtcggctact gtattctcca tgtcatatca
      541 ttataatctc ctcgtacaaa atggtcatgt cggaagtaac tattcagaaa agggtgaaga
      601 aataatagat tacttacctg gagtccctcc aattcgtgtg gctgatcttg tcacaagttt
      661 caatggcaaa ggcaaagaag ttttgccact agctttagaa gccattttaa tggcagccaa
      721 aactcaattt cttcttttcg tttcaattta cgagcttgaa tcccgtgtca tcgatgtttt
      781 aagatccgag tttcccatac ctgtttacgc cataggaccc gcaatacctt actttaagtt
      841 gccgagcgtg caaaatgacc aaaatccccc tgactacatc aagtggttag acaagcaacc
      901 gggggagtcg gtgttataca tttcacaagg gagctttcta tcggtctcaa acgcccaact
      961 tgaagaaatc attgagggcg tgcacgagag tggggtaagg tacatgtgga ttgcacgtgg
     1021 agaaacgtct cggttcaaac acgaaaatga tgaaaagggg atagttatac cttggtgtga
     1081 tcaattaaga gtattaagtc atggttctat aggggcattt tggtcacatt gtgggtggag
     1141 ttcgacgaaa gaaggtgcat tttgtggggt gccaatgctt acttttccaa tattttggga
     1201 tcaagttcct aatagtaaga tgattgttga agattggaaa atagggaaaa gggtgatgat
     1261 cgaagagggt gttttggtca ctcgagaagt aattataaaa ctcgtaaaaa gttttatgga
     1321 cgtggaaagc gaagagggaa aagagatgag aaaacgagcg aaagaaatta gcacgatttg
     1381 tcgacgagca atggaagaag gaggctcggc tcaaatagat attgattcat tcgttaacga
     1441 cattgctacg agtcattatc attagaacac atacctttat tgcaatgatt gatgaacaat
     1501 ataaaaacta aaagtgtact acatatataa aattataaga taagatctgt gataagaatt
     1561 tagtatcatt gtatgactat tgcaccctta tttaaataat ttcaactttt aaggaat
//
LOCUS       XM_071831891             432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841688), mRNA.
ACCESSION   XM_071831891
VERSION     XM_071831891.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..432
                     /gene="LOC139841688"
                     /note="uncharacterized LOC139841688; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841688"
     CDS             1..432
                     /gene="LOC139841688"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687992.1"
                     /db_xref="GeneID:139841688"
                     /translation="MGHLRSKVSNGVNQYWRPRGYKPLAASTNHNLESKTNRSSWRIR
                     IASKLKIKLRYNPKFNPKKLVTRFRRAYVSMMMKVANSPAVIGGVLGAFGSDGDCQIE
                     MRQTKEYDEKLVIQMYNSLVMRQAQLAALKVEHGPQITCFE"
ORIGIN      
        1 atgggacact tgagaagcaa agtatccaac ggtgtgaacc aatactggag accaagaggc
       61 tacaagcctc ttgccgccag tacaaatcat aatctcgaat caaagacaaa ccgaagttct
      121 tggagaataa ggatagcttc caaattgaaa ataaagctca ggtataatcc caagtttaac
      181 cctaagaagt tggttactag atttcgccga gcttatgtga gtatgatgat gaaggtagcc
      241 aattcgccgg ctgtaattgg aggagtatta ggtgctttcg gaagtgatgg tgattgtcaa
      301 attgagatga gacagacgaa ggaatacgat gagaaattgg tgattcagat gtataattca
      361 ttggtgatga gacaggcgca acttgcagca ctgaaagtcg agcatggtcc acagataact
      421 tgtttcgagt ag
//
LOCUS       XM_071831892             510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841689), mRNA.
ACCESSION   XM_071831892
VERSION     XM_071831892.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..510
                     /gene="LOC139841689"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139841689"
     CDS             1..510
                     /gene="LOC139841689"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071687993.1"
                     /db_xref="GeneID:139841689"
                     /translation="MTDLGPLNYFLGISVTRTSSGMFLSQKKYATEILERADMTGCHP
                     SRTPVETSSKLNVSGPPVANPTLYRNLVGALQYLTFTRPDIAYDVQQICLFMHDPREQ
                     HFYALKQILRYIQGTLDLSLQLFASSTTSLTAYSDADWDGCPSTRRSPQDIVYFWVTT
                     FYHGPQNVS"
     misc_feature    <1..150
                     /gene="LOC139841689"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    397..>447
                     /gene="LOC139841689"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgactgatc ttggaccgct gaattatttc ttgggtattt cagttactcg tacctcctcg
       61 gggatgtttt tatctcaaaa gaagtatgct accgagattc tagagcgcgc agatatgacg
      121 gggtgtcacc cgagcagaac cccggtcgaa accagctcca agctcaatgt gtcaggtcca
      181 ccggttgcta atcccacatt gtatcgcaac ctcgtcgggg ctcttcagta cctcactttc
      241 acgagaccag acattgctta cgatgtacag cagatatgct tattcatgca tgacccacga
      301 gagcagcatt tttatgcact taagcagatt ctccggtata tccagggtac acttgacctc
      361 agcttacagc tctttgcatc atccaccaca tctctgacag cctactcaga tgctgactgg
      421 gatggttgcc ccagtactcg ccgctcgcct caggatattg tgtatttttg ggtaacaacc
      481 ttctatcatg gtcctcaaaa tgtcagttga
//
LOCUS       XM_071831893            1218 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841691), mRNA.
ACCESSION   XM_071831893
VERSION     XM_071831893.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1218
                     /gene="LOC139841691"
                     /note="uncharacterized LOC139841691; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841691"
     CDS             1..1218
                     /gene="LOC139841691"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687994.1"
                     /db_xref="GeneID:139841691"
                     /translation="MPIKQVLTKPEISGSLAMWAVELGAYEISYLPRNAIKGQVLADY
                     LAEMSGEMEVINERTELKPMQGETWDLFTDGASCAEGAGTGLVLTAPSGEEHTYAMRF
                     NFDVTNNEAEYEALLASLNFAHKMHVTKLYAFTDLQLVANQFNGSFDVHELSMKKYLK
                     VLQESAARYEHLELAQVSRSQNKKADALSKLAALTFSHFQKQVWVEELPSKSIDNDLM
                     VASVEEEQPNWMEPIMQYICNSVLPNDKREARLVRERAPIFGIPRELVRDNGAQIAKD
                     PFKTWSTDLNIIQKVTSVAHPQANGLCEVTNRDIVSGIKKGLYEKRTGWVDELPNVLW
                     AHRTTFKKSTGETSFSLIYGSEAVIPAEILVPTHRVANFDEEANNVALYENLNLIEEC
                     MLMAAIRDANNKQ"
     misc_feature    205..579
                     /gene="LOC139841691"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(220..231,319..327,334..336,406..408,526..528,
                     568..570)
                     /gene="LOC139841691"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgccaatca agcaagtttt aacaaaacca gaaatatctg gtagcctcgc gatgtgggca
       61 gtggagttag gtgcttatga aatttcatat cttccgcgca acgctataaa agggcaagtt
      121 ttagcggact acctagcaga aatgtctggt gagatggaag taattaatga gcggacagag
      181 ttaaagccaa tgcaaggtga gacatgggat ttatttaccg atggagcctc atgcgcagag
      241 ggtgctggta cgggtctagt gttaacagcc ccaagtggtg aggagcatac gtacgcgatg
      301 cgtttcaatt tcgatgtaac aaataatgag gctgaatatg aagcactact tgctagtttg
      361 aatttcgcgc ataaaatgca tgtcaccaaa ttgtacgctt tcacagattt acagttagtg
      421 gcaaatcagt tcaatggctc tttcgacgtg catgaactct caatgaaaaa atatttaaag
      481 gtattacaag aatcggctgc gcggtatgag catttggaac ttgcacaagt atcaagaagt
      541 caaaataaga aagcggatgc attaagtaag ctggctgcat taacgttctc acactttcaa
      601 aagcaagttt gggttgagga gttaccaagc aagtcaattg ataatgatct aatggttgcg
      661 tctgttgaag aagagcaacc aaactggatg gaaccaatca tgcagtatat ctgcaatagc
      721 gttctgccga atgacaaacg cgaagctcgc ttagttcgtg agcgagcacc aatatttggc
      781 attccgcggg agttggttag ggataatggg gctcaaatag cgaaagaccc gttcaaaaca
      841 tggagcactg atttgaatat aatccagaaa gttacgtcgg ttgcgcatcc gcaagctaat
      901 ggcttgtgtg aagtaactaa tcgtgatatt gtaagcggaa tcaaaaaagg cttatatgaa
      961 aagcgcactg gttgggtaga tgagttaccc aatgttttgt gggcgcatcg taccactttc
     1021 aagaagagta cgggtgaaac atcttttagt ttaatatatg gctctgaagc agtaataccc
     1081 gctgaaattc ttgtgccaac acatcgagtt gctaactttg atgaagaagc aaataatgtg
     1141 gctttatatg aaaatttaaa tttaatagaa gagtgcatgt taatggctgc tatcagggat
     1201 gcaaataaca aacaataa
//
LOCUS       XM_071831894            1472 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841692), mRNA.
ACCESSION   XM_071831894
VERSION     XM_071831894.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1472
                     /gene="LOC139841692"
                     /note="uncharacterized LOC139841692; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139841692"
     CDS             137..1123
                     /gene="LOC139841692"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687995.1"
                     /db_xref="GeneID:139841692"
                     /translation="MATEAAKFKKSDLIPIPQPPDYHPEITVSPSHDGLHFWQFMIAG
                     SIAGMAEHTAMFPIDTIKTRMQVLGSCPIKSAGLRQALQSILKTDGPAGLYRGIGAMG
                     LGAGPAHAVYFSVYEMCKETFTRKNPNNPIAHAAAGVFATVASDAVFTPMDMVKQRLQ
                     LGSGSPYKGVFDCIRVVLKEEGFRAFYASYRTTILMNAPFTAVHFATYEAAKRGLIGV
                     VHDSANDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRYVNGSIRDVF
                     RTILRKDGYRGLFRGWMPRMLFHAPAAAICWSTYEAGKSFFQNSDDRSGRMT"
     misc_feature    233..517
                     /gene="LOC139841692"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    515..787
                     /gene="LOC139841692"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    <869..1096
                     /gene="LOC139841692"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
ORIGIN      
        1 ataaaaaaac aaaatcctaa ttttattagg gtttcaaaac cctaattttt agtcccgttc
       61 ctgtaataat taatattgca attgcaattg caattgcaaa tcaattacaa ctacaattac
      121 aatttcaatt catcccatgg caacagaagc cgcaaaattc aaaaaatccg acctaattcc
      181 aatcccacaa ccaccagatt accaccctga aatcaccgtt tcaccgtcac acgacggcct
      241 acacttctgg cagttcatga ttgccggttc aattgccggc atggctgaac acacggccat
      301 gtttccaatt gatacaatta aaacccgtat gcaagtatta ggatcttgcc cgattaaatc
      361 cgcgggcctc cgacaagctt tacaatccat attaaagaca gacggacccg ccggacttta
      421 ccgcggcatc ggcgccatgg ggctcggcgc cggtccggca cacgccgtat acttttccgt
      481 ttatgagatg tgtaaagaga cttttacgcg gaaaaaccct aataatccga ttgcgcacgc
      541 tgcggcgggg gtttttgcga ctgtggcgag tgatgcagtg tttacaccaa tggatatggt
      601 gaaacagagg ttgcaattgg gtagtgggag tccttataaa ggtgtgtttg attgtatcag
      661 ggttgtgttg aaagaggaag ggtttagggc tttttacgca tcgtatagga ctacaatatt
      721 gatgaatgcg ccgtttactg cggtgcattt tgcgacgtat gaagcggcga aaagagggtt
      781 gattggtgtg gtgcatgata gtgcgaatga tgagcggttg gtggttcatg ctactgctgg
      841 tgctgcagca ggtgcattgg ctgctgctgt tactactcct cttgatgttg tgaaaactca
      901 gttgcagtgt cagggtgtat gtggatgtga tagatacgtt aacggttcaa tcagagacgt
      961 ttttagaaca attttgagaa aagacggata cagaggactt tttaggggat ggatgccaag
     1021 aatgcttttt catgctccgg ctgctgcgat ttgctggtca acatacgaag ctggaaagtc
     1081 attttttcaa aatagcgatg atagaagtgg cagaatgacc taaattaagt tttgaaattc
     1141 taatttttat tcttgttgta tcgaggaata ctcatataaa aagagaaaga tcgagttctc
     1201 cgagtctggg ggcctacata cttccagctt ttatatttat tatgagcttc actcgatttg
     1261 gcaacgatta tttgaggcaa accagaaggc tcggtttgat ttaggtaaga tagtattcat
     1321 gacatatact tgtgagttta gcagctgtaa ctgttgttta tttcaaataa gtttttcaaa
     1381 aatagtggta ttcatgacat atacttgtga gtttagcagc tgtaactgtt gtttatttca
     1441 aataagtttt tcaaaaatag tgagttttgt aa
//
LOCUS       XM_071831895            1109 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 26 (LOC139841693), transcript variant X1, mRNA.
ACCESSION   XM_071831895
VERSION     XM_071831895.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1109
                     /gene="LOC139841693"
                     /note="probable protein phosphatase 2C 26; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139841693"
     CDS             47..967
                     /gene="LOC139841693"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 26 isoform X1"
                     /protein_id="XP_071687996.1"
                     /db_xref="GeneID:139841693"
                     /translation="MAVNVSYCGHHQHQLLCYSGIQVRLSRKRVTNMKFIRCCSSSPV
                     ANPIVKPELTIRVGTQLIPHPKKVAKGGEDAFFVNSYNGGVIAVADGVSGWAEKDVDP
                     AKFSRDLMRKASSLVDDEEVNYDPRILVRKAHAATSSTGSATVIISMLDENGILKVAN
                     VGDCGLKVIRKGQIIFSTFPQEHYFDCPYQLSSEAVTQTYLDATVTSIESVKGDIIVM
                     GSDGLFDNVFDDEIISTIANHKDVAETAKVLADLAYKHSVDFYFDSPYSIKARSRGFD
                     VPWWKKVLGQKLTGGKMDDITVIVGEVVSS"
     misc_feature    230..814
                     /gene="LOC139841693"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; Region: PP2Cc; smart00332"
                     /db_xref="CDD:214625"
     misc_feature    order(263..268,314..322,707..709,926..928)
                     /gene="LOC139841693"
                     /note="active site"
                     /db_xref="CDD:238020"
ORIGIN      
        1 atgtgtgaac tgtaaactca gaaatacaaa ctttgtggtt gtaaaaatgg cagtgaatgt
       61 ttcttattgt ggtcatcatc aacatcaatt gttgtgttat tctggaattc aagtacgact
      121 ttcaagaaaa agagtgacga atatgaaatt tattcgttgt tgttcttctt ctcctgtggc
      181 taatcctatt gtaaagcctg agttgactat ccgtgtagga actcaactca ttccacaccc
      241 caaaaaggtt gcaaaaggtg gagaggatgc attctttgtg aacagttaca atgggggagt
      301 tattgctgtt gcagatggtg tttctgggtg ggcagaaaag gatgttgatc cagctaaatt
      361 ctcaagggat cttatgagaa aagcttcgtc tttagttgat gatgaggagg ttaactatga
      421 tcctcggatt cttgttagaa aagcacacgc tgccacctca tcaacaggtt cagctactgt
      481 aatcatttca atgctagatg aaaatgggat tctaaaggtt gctaatgttg gcgattgtgg
      541 gcttaaggtt attcgcaaag gtcaaataat cttttcaaca tttccacaag agcattattt
      601 cgattgtccg tatcagttga gttcagaagc agtcacccaa acatatctag atgccacggt
      661 tacgagtatc gagtcagtga agggggacat tatagtaatg ggttcagacg ggcttttcga
      721 taatgttttt gatgatgaaa ttatttcaac gatagctaat cataaagatg tcgctgaaac
      781 cgcaaaggta ttggctgatc ttgcttacaa gcattcagtg gatttctact ttgactcccc
      841 gtattcgatc aaagccagaa gcagagggtt tgatgttcca tggtggaaaa aggtcttggg
      901 gcaaaagtta acaggtggaa agatggatga tataactgta attgttggtg aagtggttag
      961 cagttaacat attttgatta ttacagattt tgtttatagc agcttaatta acttcaacat
     1021 atttggttcc atgtacatgt tttgtatcta ttgggtaatt ttatggatat gatttgtatc
     1081 tattttgaaa attatttgtt aaggacaac
//
LOCUS       XR_011757425             930 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 26 (LOC139841693), transcript variant X2, misc_RNA.
ACCESSION   XR_011757425
VERSION     XR_011757425.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..930
                     /gene="LOC139841693"
                     /note="probable protein phosphatase 2C 26; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841693"
     misc_RNA        1..930
                     /gene="LOC139841693"
                     /product="probable protein phosphatase 2C 26, transcript
                     variant X2"
                     /db_xref="GeneID:139841693"
ORIGIN      
        1 atgtgtgaac tgtaaactca gaaatacaaa ctttgtggtt gtaaaaatgg cagtgaatgt
       61 ttcttattgt ggtcatcatc aacatcaatt gttgtgttat tctggaattc aagtacgact
      121 ttcaagaaaa agagtgacga atatgaaatt tattcgttgt tgttcttctt ctcctgtggc
      181 taatcctatt gtaaagcctg agttgactat ccgtgtagga actcaactca ttccacaccc
      241 caaaaaggtt gcaaaaggtg gagaggatgc attctttgtg aacagttaca atgggggagt
      301 tattgctgtt gcagatggtg tttctgggtg ggcagaaaag gatgttgatc cagctaaatt
      361 ctcaagggat cttatgagaa aagcttcgtc tttagttgat gatgaggagg ttaactatga
      421 tcctcggatt cttgttagaa aagcacacgc tgccacctca tcaacaggtt cagctactgt
      481 aatcatttca atgctagatg aaaatgggat tctaaaggtt gctaatgttg gcgattgtgg
      541 gcttaaggtt attcgcaaag gtcaaataat cttttcaaca tttccacaag agcattattt
      601 cgattgtccg tatcagttga gttcagaagc agtcacccaa acatatctag atgccacggt
      661 tacgagtatc gagtcagtga agggggacat tatagtaatg ggttcagacg ggcttttcga
      721 taatgttttt gatgatgaaa ttatttcaac gatagctaat cataaagatg tcgctgaaac
      781 cggtattggc tgatcttgct tacaagcatt cagtggattt ctactttgac tccccgtatt
      841 cgatcaaagc cagaagcaga gggtttgatg ttccatggtg gaaaaaggtc ttggggcaaa
      901 agttaacagg tggaaagatg gatgatataa
//
LOCUS       XM_071831896             765 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable protein phosphatase
            2C 26 (LOC139841693), transcript variant X3, mRNA.
ACCESSION   XM_071831896
VERSION     XM_071831896.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..765
                     /gene="LOC139841693"
                     /note="probable protein phosphatase 2C 26; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841693"
     CDS             147..623
                     /gene="LOC139841693"
                     /codon_start=1
                     /product="probable protein phosphatase 2C 26 isoform X2"
                     /protein_id="XP_071687997.1"
                     /db_xref="GeneID:139841693"
                     /translation="MLDENGILKVANVGDCGLKVIRKGQIIFSTFPQEHYFDCPYQLS
                     SEAVTQTYLDATVTSIESVKGDIIVMGSDGLFDNVFDDEIISTIANHKDVAETAKVLA
                     DLAYKHSVDFYFDSPYSIKARSRGFDVPWWKKVLGQKLTGGKMDDITVIVGEVVSS"
     misc_feature    <159..470
                     /gene="LOC139841693"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; Region: PP2Cc; smart00332"
                     /db_xref="CDD:214625"
ORIGIN      
        1 gcagaaaagg atgttgatcc agctaaattc tcaagggatc ttatgagaaa agcttcgtct
       61 ttagttgatg atgaggaggt taactatgat cctcggattc ttgttagaaa agcacacgct
      121 gccacctcat caacagaatc atttcaatgc tagatgaaaa tgggattcta aaggttgcta
      181 atgttggcga ttgtgggctt aaggttattc gcaaaggtca aataatcttt tcaacatttc
      241 cacaagagca ttatttcgat tgtccgtatc agttgagttc agaagcagtc acccaaacat
      301 atctagatgc cacggttacg agtatcgagt cagtgaaggg ggacattata gtaatgggtt
      361 cagacgggct tttcgataat gtttttgatg atgaaattat ttcaacgata gctaatcata
      421 aagatgtcgc tgaaaccgca aaggtattgg ctgatcttgc ttacaagcat tcagtggatt
      481 tctactttga ctccccgtat tcgatcaaag ccagaagcag agggtttgat gttccatggt
      541 ggaaaaaggt cttggggcaa aagttaacag gtggaaagat ggatgatata actgtaattg
      601 ttggtgaagt ggttagcagt taacatattt tgattattac agattttgtt tatagcagct
      661 taattaactt caacatattt ggttccatgt acatgttttg tatctattgg gtaattttat
      721 ggatatgatt tgtatctatt ttgaaaatta tttgttaagg acaac
//
LOCUS       XM_071831897            2259 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841694), mRNA.
ACCESSION   XM_071831897
VERSION     XM_071831897.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2259
                     /gene="LOC139841694"
                     /note="uncharacterized LOC139841694; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841694"
     CDS             1..2259
                     /gene="LOC139841694"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687998.1"
                     /db_xref="GeneID:139841694"
                     /translation="MDVFAWCENDMTGVPCHIAEHRLNVNPTLKPVVQKRRGMAPDRV
                     KWLCEEPDGSWRMCIDFKDLNKACPKDNYPLPEIDLKVESLHAFPYKCFLDAARGYHQ
                     IRMGQEDADKTAFHTGKGIFSYVMMPFGLINAGATYQRLTDTAFEKQIGHNLDAYVDD
                     LGIQANPKKIAALENMTAPKTVKEVQTNEAFGSILVAERDKVQKPVYFVSKALTGSEI
                     NYAPIEKFVYALILTSQRLRIYFQGHPVHVLTNMPVKQVLTKPEISGRLALWAVELGA
                     YQISYLPCSTVKGQILADYLAEMTGELEVINERTTLKPVVGKNWDLFTDGASCAEGAG
                     AGLELASPGGEEHTYTLRFNFDVTNNEAEYEALLAGLNIARKMNITKLRAFTDSQLVA
                     NQFNGSFEAHDSSMQKYLHLLKELEEQFEHFKLAQVPRSQNKKADALSKLAALTFLHF
                     QKQVWVEELPSKSIDNDLMVASVEEAQPNWMEPILQYIRSDILPSDKREARLVRERAP
                     MYIIQNDILYRKSYCGPKMRCVGPIEAEMIVDEVHNGSCALHSGPFPAGPGNVKFLIV
                     AIDYFKKWVKAKAVRTITGVQVRNFVWEYIICRFGIPRELANSLCEVTNRDIVSGIKR
                     RLCEKRTGWVDELPNVLGAHRITFKRSTGETPFSLVYGSEAVIPTEILVPTHRVASFE
                     EEANDDALGEWVLRNNDASRAEKLGKLGPNWEGPYQVVAINAAGSYKLADVEGLTLPN
                     AWHAALLKRYYA"
     misc_feature    151..>489
                     /gene="LOC139841694"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(283..300,385..390,469..471,475..480)
                     /gene="LOC139841694"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(283..300,385..387,475..477)
                     /gene="LOC139841694"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    388..390
                     /gene="LOC139841694"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    568..888
                     /gene="LOC139841694"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    958..1332
                     /gene="LOC139841694"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(973..984,1072..1080,1087..1089,1159..1161,
                     1279..1281,1321..1323)
                     /gene="LOC139841694"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggatgttt ttgcttggtg tgaaaatgat atgactggtg ttccgtgcca tattgcagaa
       61 cacagactta atgtaaatcc aacattaaaa cctgtagtac agaagcgtag aggcatggcc
      121 ccagaccgcg ttaaatggct gtgcgaggag cctgatggtt catggagaat gtgcattgat
      181 ttcaaggatt tgaataaagc atgccctaag gataactatc cactgcctga aattgatttg
      241 aaagtagaat ctttgcatgc ttttccatat aaatgttttt tggatgcagc aaggggttat
      301 catcagatcc gaatgggtca agaagatgca gataaaaccg cctttcatac aggtaaaggt
      361 atattttctt atgtaatgat gccttttggt ttaatcaatg cgggcgcgac gtatcaacgt
      421 ttgactgaca ccgcgttcga aaagcaaatt gggcataatc ttgatgctta tgtagatgat
      481 ttaggtattc aagctaatcc aaagaaaatc gctgctcttg aaaatatgac tgcgcccaag
      541 acagtcaaag aagtgcaaac aaatgaagct tttggctcca ttttggttgc ggaaagggat
      601 aaagtacaaa aacctgtgta ttttgtcagt aaagctctta caggaagtga aataaactat
      661 gcgccaattg agaagtttgt gtacgcactt atattaacat cgcaaaggtt aagaatatat
      721 tttcaagggc atccagtgca cgtgttaact aatatgccgg tcaagcaagt cttaacaaaa
      781 ccagagatat ctggtagact cgcgttgtgg gcagtagagt taggtgctta tcaaatttct
      841 taccttccgt gcagcactgt aaagggtcag attttggcag attatctcgc tgaaatgact
      901 ggggagttgg aggtgattaa tgagcgaaca acgttaaaac cggtagtcgg caaaaattgg
      961 gatttgttta ctgacggagc ttcatgtgca gagggcgcag gtgcgggttt ggaattggca
     1021 agcccaggtg gtgaagagca tacgtacacg ttgcgtttta attttgatgt gacaaataat
     1081 gaagcggaat acgaagcgtt acttgctggt ttaaatattg cgcgaaaaat gaatatcact
     1141 aagttgcggg catttacaga ctcgcaatta gtagcaaatc agtttaatgg ctctttcgaa
     1201 gcacatgatt cttcaatgca aaaatatttg cacttattga aagaattgga agagcagttt
     1261 gagcatttta aactcgcgca agtgccaaga agtcaaaata aaaaggcgga tgctttgagt
     1321 aagttggccg ctctaacgtt tttgcacttt caaaaacaag tttgggttga ggagttgcca
     1381 agcaagtcaa tagataacga cttaatggtt gcgtctgttg aagaagcaca gccaaattgg
     1441 atggaaccaa tcctgcaata cattcgtagt gatattttgc caagtgataa gcgcgaagct
     1501 cgcttagtaa gagagcgagc accaatgtat atcattcaaa atgatatttt gtatcgcaaa
     1561 tcatactgtg gtccaaagat gcgatgtgtg ggcccaattg aagctgaaat gatagttgat
     1621 gaagtgcata atggttcttg tgcactacat tcagggccat ttcccgcagg acctggcaat
     1681 gtcaagtttc tgatcgtggc aattgactat tttaaaaaat gggttaaagc taaggcggtt
     1741 cgcactatca ctggtgtgca agtacgaaat tttgtatggg aatacattat ttgcagattt
     1801 ggtattccgc gtgagttggc taatagctta tgcgaagtaa ccaaccgcga tattgtaagc
     1861 ggtattaaaa ggaggttatg tgaaaagcga actggttggg tagatgaatt acccaatgtg
     1921 ttgggggcac atcgcattac tttcaagaga agcacagggg aaacaccttt tagtttggta
     1981 tatggctctg aggcagtaat acccacagaa attcttgtgc caacgcatag ggttgctagc
     2041 ttcgaggaag aagcaaacga tgatgcattg ggcgaatggg tactgcgaaa taacgatgca
     2101 agtagagcag aaaagcttgg caaattagga cctaattggg agggtcctta tcaagttgtg
     2161 gcaattaatg cagcaggttc atataagctc gcagatgtgg aagggctaac tttacctaat
     2221 gcgtggcatg ctgctttgtt aaagcgatat tatgcgtaa
//
LOCUS       XM_071831898            4959 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841695), mRNA.
ACCESSION   XM_071831898
VERSION     XM_071831898.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4959
                     /gene="LOC139841695"
                     /note="uncharacterized LOC139841695; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841695"
     CDS             1..4959
                     /gene="LOC139841695"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071687999.1"
                     /db_xref="GeneID:139841695"
                     /translation="MGKKKKTQVSTSRVLRNRNIGVDENGKNTESESSDSSPEIESRK
                     EEQINIVNPKIVLTEEYVTRNFDGQGHVDNVKKGDNTDNVIHTVVEESLDGSIHSDYE
                     SEFPRIPGDRGKNTEPDMGEQPEYEEKTPSPPGKSYLSAAGASNAKKKVNFRYIESEK
                     HDGVDVVIPIESVLEASDRYKHTLYGYFLGQRLPFPVVKYYVMNTWKKFGIEKMMMNA
                     KGFYFFKFESEQGMLDVMEGGPWMIRNSPIILNTWSPDVSLSKEDLTRAPIWVKLFDI
                     PLAAYTEVGLSVIASKIGKPIMLDSYTTTMCVESWGRPNFARAMIEVGAELGLKDRLT
                     VGIPNRLTNNTTIDEIRIEYEWKPPRCSCCKVFGHRDAQCPKAVPVDANTVVKINDGF
                     IQVTNKNIGKKNGAAGIILNNAKSKFVYRPKNKNGADISKPSTTNAGRKKVTNPFEVL
                     NSCNEEDKEIKLQTEKDQDQMEVEPGNDEMAKFMASKKYSEGASTPGLDGFNGFVVRY
                     SRDGTGLQIAASVIELMILAVSDQAIHCQVRSIEDDQNFFISFIYAANQYAQRRPLWR
                     ELEMHNRFINGNPWIMMGDFNVSLTLEDSSMGSSKITIAMREFQECVDKVHMVDVNHS
                     GFHYTWNQRPNAEVGLLKKIDRVMANDSFIDKFTDAYVLFQAYRTSDHCPAILKFAQN
                     HKNKPKPFKFSNYITEHKKFKETVTEGWKVDFQGHMMFRITKRLRLLKKEVRKLMWSK
                     GNLHENVINLRKDLDEVQAKLDKNPESREVRKQESITLRKYNDAIYEEECFLKQKSKI
                     EWLRVGDSNSRYFHNVVKGRNHRGKIHAIQNPEGTIVEGREVCTIITHHFKKFLGSRM
                     TGSPIVNPSTLFTKRIGTDTAAKMVTEVTTEEIRRAIFDINDSKSPGPDGYSAAFFKQ
                     AWDIIGDDVVQAVKDFFHNGRLLKEINHTIISLIPKVQTPTKVTEFRPISCCNVLYKC
                     ISKVISNRIKISLDEIVSDNQLAFVPGRRISDNILLTQEIMKNYHLNRGVPRCAFKVD
                     IQKAYDTVDWGFLKKCLVGFGYPHKMVKWIMRCVSTASYSININGDLHDYFPGKRGLR
                     QGDPLSPYLFTLIMEALSLMLIRRASNGDDFRYHPKCEQLKLINLCFADDLFLFAAAD
                     LNSVEVIRDALEEFKACSGLTLSLPKSTAFFANVYNVLKEAILNLLPFEEGQLPVRYL
                     GVPLVSSRLMYRDCKILVERVKRKIEDWKNKFLSFAGRVQLIISVLTSMQVYWASVFI
                     LPVAIIKDIEKLLRGFLWCQGEMKRGKAKVKWDDLCLPKEEGGLGLKRLKYWNIALIT
                     THIWSILTQKESLWVKWVHAYRIGNYSFWDAPIRPDASWSWRKLLNCRDIIRKHMVYN
                     IGDGAKALAWFDKWNNIGPLTDIISWRDINAAGFYRYARVKDLILDKSWKWPHNWHVK
                     YPVLNSIQVPVISEKCDELQWQHTEGILHQFSVRQAYEAIRPAGSIVPWFEVVWHSNS
                     IPRHSFLLWLLMKQKLKTQDNLKTWEIRQGQVLECPLCFECQDSHSHLFFGCRYSRVV
                     WEYVKQYAHGLRSHDWSKVVDDIAGSNDKNSANTLVAKLLFAAAVYFIWIERNSRLFD
                     SKKRSAKDLFGEIYASVRLKLFSVRFKETRNIKLFKIAWILE"
     misc_feature    517..954
                     /gene="LOC139841695"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
     misc_feature    <1729..2040
                     /gene="LOC139841695"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    2824..3624
                     /gene="LOC139841695"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(3088..3105,3265..3270,3403..3405,3409..3414,
                     3610..3615)
                     /gene="LOC139841695"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(3088..3105,3265..3267,3409..3411)
                     /gene="LOC139841695"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    3268..3270
                     /gene="LOC139841695"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    4399..4656
                     /gene="LOC139841695"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggtaaga agaaaaagac acaggtatca acgtctcggg tgttacgtaa tcgcaacata
       61 ggggtggatg agaacggaaa gaataccgaa agtgaaagtt cagattcatc acctgagatt
      121 gaatcaagga aggaagagca gatcaatatc gtaaacccta agatcgtctt aacagaagaa
      181 tatgttacta gaaactttga tgggcaaggg catgtggata acgtaaagaa aggagacaac
      241 actgataatg tgatccatac tgtggttgaa gaatcgttgg atgggagtat acactcagac
      301 tatgagtctg aattcccacg tataccaggg gacagaggca agaacacaga acctgatatg
      361 ggtgaacaac cagagtatga agagaaaact cctagtcctc cgggtaaatc ttaccttagt
      421 gctgcaggtg cttctaatgc taaaaagaag gtaaactttc gttacattga atctgaaaaa
      481 catgatggtg tggatgtggt aataccaata gaatctgttc ttgaggcatc agatagatat
      541 aaacatactc tttatggata ttttctcggg cagagattac ctttccctgt cgtgaaatac
      601 tatgttatga acacatggaa aaaatttggt attgaaaaaa tgatgatgaa tgctaaggga
      661 ttctattttt ttaagttcga atctgagcaa ggtatgttag atgtgatgga aggaggccct
      721 tggatgatac gtaacagccc gataatcctt aatacttggt ctccggatgt ttcgttgtct
      781 aaagaagatc ttacgagggc ccccatttgg gtgaaattat tcgatatacc gttagcggcc
      841 tacacggagg tagggttaag tgttattgct tcaaagattg gcaagccaat catgcttgat
      901 tcctacacaa ctactatgtg tgtggagtcg tggggaagac ctaattttgc tagggctatg
      961 attgaggttg gggccgagct tggactgaag gacaggttga cggtgggaat cccaaatcga
     1021 ttgactaata acacaactat agacgaaatt agaatcgaat atgaatggaa accgccgaga
     1081 tgctcttgtt gtaaagtgtt tggtcatcga gatgctcaat gcccgaaggc agttccagtt
     1141 gacgcaaata ctgtggtgaa aataaatgat ggattcatac aagtaacaaa taaaaacatt
     1201 gggaagaaga atggggctgc tgggattatt ttgaataatg ctaaatctaa atttgtttat
     1261 aggcccaaga acaaaaatgg agcagacatc agtaagccaa gtactaccaa tgcaggaagg
     1321 aaaaaggtaa cgaatccttt tgaagttttg aatagctgta atgaagaaga taaagaaatt
     1381 aagttgcaaa ctgagaagga ccaggatcag atggaggtgg aaccaggaaa cgatgaaatg
     1441 gcaaagttta tggcatcgaa aaaatattct gagggggcaa gcactcccgg tttggacggt
     1501 tttaatggat ttgtagttcg gtattcccga gatggaactg gtcttcaaat agcagcgtct
     1561 gtaatcgagc ttatgattct tgcggtctct gatcaagcta ttcactgtca agtacggtcg
     1621 atagaagatg atcagaattt ttttatatcg ttcatttatg cggctaacca gtacgcacag
     1681 cgaagacctc tttggaggga attggaaatg cataaccgtt tcatcaacgg aaatccttgg
     1741 attatgatgg gagacttcaa cgtttctctg accttagaag actcttccat gggtagctct
     1801 aaaataacca tagccatgag agaatttcaa gaatgtgttg ataaagtgca tatggttgac
     1861 gttaatcatt cgggtttcca ttacacttgg aatcaaaggc ctaacgcgga agtggggttg
     1921 ttgaagaaaa ttgatcgtgt tatggctaat gactctttta ttgataaatt cactgatgct
     1981 tatgtattgt ttcaggctta tcgtacctcg gaccattgcc ccgccatttt gaaatttgca
     2041 cagaaccaca agaataagcc taaaccattc aagtttagta attacataac cgagcataaa
     2101 aagtttaaag aaacggtaac cgaaggctgg aaggtggatt ttcaaggtca catgatgttt
     2161 cgaatcacaa aacggcttcg tcttttaaag aaagaagtga gaaaactaat gtggagcaag
     2221 ggaaatttac atgaaaatgt tattaattta aggaaagacc ttgatgaggt gcaagcgaag
     2281 ctcgataaaa atccagagag tcgagaagtt agaaagcagg agagcattac tctcagaaaa
     2341 tataatgatg ctatatatga agaagagtgt tttctaaagc aaaaatcaaa aattgaatgg
     2401 ttgcgtgttg gcgatagtaa ctcaaggtat tttcataatg tggttaaagg gcggaaccat
     2461 cgtggaaaaa tccatgctat tcaaaatcca gaagggacga tagttgaagg tcgagaagtt
     2521 tgtacaatta ttacacatca tttcaaaaag ttcttgggct cgaggatgac tggtagcccg
     2581 attgtgaacc cttcgactct gtttacaaaa agaattggta cagatacagc tgcaaagatg
     2641 gttactgagg tgacgacaga agaaatcagg agggctatat tcgatataaa tgactcaaaa
     2701 tccccgggcc ctgatggcta ctctgcggcg ttttttaaac aagcttggga tattattggc
     2761 gatgatgtgg ttcaagctgt gaaagacttc ttccacaatg gtagactttt gaaagagatc
     2821 aaccatacta ttatcagctt aattccgaaa gttcaaaccc ccacgaaggt gaccgagttc
     2881 cgtcctatat cttgttgtaa tgttttatat aagtgtatca gtaaagtcat ttccaataga
     2941 attaaaatta gcttggatga aattgtgagt gataatcagt tagcttttgt gcctggaaga
     3001 aggatctcgg ataacattct tcttacccag gaaataatga agaattatca ccttaatcga
     3061 ggtgttccga gatgtgcctt taaagttgat attcaaaagg cgtacgacac ggtagattgg
     3121 gggtttttga agaagtgttt agtaggcttc ggttatcccc acaagatggt taaatggatt
     3181 atgagatgtg tttctactgc atcttattct ataaatatta atggtgattt gcatgattat
     3241 tttccgggaa agcgcgggct gcgtcaaggg gaccctttat ctccctatct ctttacgttg
     3301 attatggagg cgttatcttt gatgttgatc agaagagctt caaatgggga cgacttcaga
     3361 tatcatccga agtgtgagca actaaaactc attaacctgt gttttgcaga tgatcttttt
     3421 ctttttgctg ctgcggactt gaattcggta gaggttatca gagacgccct tgaagagttc
     3481 aaggcatgct caggattgac ccttagcctt cctaaaagta ctgccttctt tgcaaatgtt
     3541 tataacgttc taaaggaggc gattcttaat ttattaccgt ttgaagaagg gcaacttcct
     3601 gttagatact tgggtgttcc tctagtttct tctcgcttga tgtatcgaga ttgcaaaatc
     3661 ctagtggaga gagttaaacg gaagattgaa gattggaaaa acaagttcct ttctttcgct
     3721 gggagagtgc aacttattat ttctgtgtta acatctatgc aggtttattg ggcttctgtt
     3781 ttcattttac cggtagctat catcaaggat attgaaaagc ttcttcgcgg cttcctttgg
     3841 tgccaaggcg aaatgaagag ggggaaggct aaggtaaaat gggatgatct atgtcttccg
     3901 aaagaagaag ggggtcttgg tttaaaaaga ttaaagtatt ggaatattgc tctcattact
     3961 actcatatat ggagtattct aacccaaaag gaatccttgt gggttaaatg ggtccatgcc
     4021 tatcgcatag gcaattactc tttttgggat gctccaatta gaccggatgc gagttggagt
     4081 tggagaaagc tcttaaattg tagagatata attcgtaagc acatggtgta taatattggt
     4141 gacggggcaa aagctcttgc ttggtttgat aagtggaata acattggccc attaacggat
     4201 attatttctt ggagagacat taatgcagcg ggcttctatc gttatgctcg agtgaaagat
     4261 ttgattctgg ataaatcttg gaagtggcct cataactggc atgtgaaata cccggtgcta
     4321 aactcgattc aggttcctgt tatttctgaa aaatgcgatg agttacaatg gcaacatact
     4381 gaaggtatac tccatcaatt ttctgtgaga caagcttatg aggcaattcg tccagctggt
     4441 tccattgtcc catggtttga ggtggtttgg cattccaata gcattcctag acattcattt
     4501 cttctttggc ttcttatgaa acaaaagcta aaaactcagg acaacctaaa gacatgggaa
     4561 attagacaag gtcaggttct tgaatgcccc ctttgtttcg aatgtcaaga ttcccatagc
     4621 catctttttt ttggttgtcg ttactcgaga gtagtttggg agtatgtcaa acagtatgcg
     4681 catggactta gaagccatga ctggtccaag gtagtcgatg acattgcggg ttctaatgac
     4741 aagaatagtg caaatactct tgtggccaag cttttgttcg cagctgcggt gtattttatt
     4801 tggatagaaa ggaactccag attgttcgat tcaaaaaaac gatctgctaa ggatttattt
     4861 ggggagattt atgcttcagt tcgtttaaag cttttttcgg ttcgcttcaa agagactcgc
     4921 aacattaagc tgtttaagat cgcttggata ctagagtga
//
LOCUS       XM_071831899             597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841696), mRNA.
ACCESSION   XM_071831899
VERSION     XM_071831899.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..597
                     /gene="LOC139841696"
                     /note="uncharacterized LOC139841696; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841696"
     CDS             1..597
                     /gene="LOC139841696"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688000.1"
                     /db_xref="GeneID:139841696"
                     /translation="MISLRCCFLLLSLCVTTYAKVHPVIHPAQTLSRPADVKPDVVSK
                     ACEPSVDKALCVSVLKSQKFSDVNDLKQATYVAIQAASQDAVATSEMIKATRLKEENK
                     EMEEDAIEEETLADCATSYLGIVEMLANATSALMTGPQTDVTVDLKAALTTSEACELS
                     IAGGRKSRQVEEVAKKNENVKKFCSNALAVYDVFAKGH"
     misc_feature    118..570
                     /gene="LOC139841696"
                     /note="Plant invertase/pectin methylesterase inhibitor;
                     Region: PMEI; smart00856"
                     /db_xref="CDD:214860"
     misc_feature    order(355..360,367..369,379..381,430..432,466..468)
                     /gene="LOC139841696"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:275438"
ORIGIN      
        1 atgatttcct taagatgttg tttcctactt ttatctctct gtgtcacaac atacgccaag
       61 gtccacccgg tgatacatcc ggcacaaaca ttatctcgac ctgcagacgt gaaacccgac
      121 gtggtttcaa aggcatgtga gccttccgtt gataaggcat tatgtgtttc cgtcctaaaa
      181 tctcaaaaat ttagcgacgt gaatgattta aaacaagcca catatgtagc aattcaagca
      241 gcatcccaag atgcggttgc tacatcagag atgataaaag ctactaggct aaaggaagag
      301 aataaagaaa tggaggaaga tgcaatagaa gaagaaacat tagcagattg tgccacgagt
      361 tatctcggta ttgttgaaat gttagcaaat gccacaagtg cactaatgac tggacctcaa
      421 accgatgtga cagttgatct caaggctgcg ttaacaacat cagaggcatg tgaactgagt
      481 attgctggag gacggaagag ccgtcaagta gaagaagtgg cgaaaaagaa tgaaaatgtg
      541 aagaagtttt gctcaaatgc tttggcagtt tatgatgttt ttgctaaggg acattga
//
LOCUS       XM_071831900            1389 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841697), mRNA.
ACCESSION   XM_071831900
VERSION     XM_071831900.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1389
                     /gene="LOC139841697"
                     /note="uncharacterized LOC139841697; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841697"
     CDS             1..1389
                     /gene="LOC139841697"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688001.1"
                     /db_xref="GeneID:139841697"
                     /translation="MTAPKTVKEVQSLTGKLAILTRFLSKAAERQLPFFKTLKGCSTQ
                     KHFFWTTEAESAFQEMKQLLATLPTLTAPIKGEILYLYVSVANEAFSSVLVAEREKVH
                     KPIYFVSKALTGSEINYAPMKKFVYALLLTSRRSYEITYLPWTSVKVQVLADYLAEMT
                     CELEVIHEQTQLQPVRGETWDLFTDGASCVEGAAEYEALLAGLNIALKLNVTKLCTYI
                     DSQLVSNQFNGSFEAYELSMQKYLKFLKETAEKFEHFELVQVSRNQNKKADALSKLAA
                     LTFSHFQKQVWVEELPSKAIDGSLVFAAIEEECPNWMKPIIENMRNNTLPENKEEARL
                     VCIRSPMYTIENGILYRKSYYGPLTRCVGPTEAEAIIEEVHSSSCALHSGYKTIATKN
                     MRMGYFWPTLYRDVAKIVKRCKSCQRRAPQNRRSRYDLNPVYSPWPFYKWAIDIVGPF
                     PAGAGNVKIPNC"
     misc_feature    145..387
                     /gene="LOC139841697"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    <580..828
                     /gene="LOC139841697"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    1084..1266
                     /gene="LOC139841697"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgactgcac caaaaacagt aaaagaagtg caaagtttaa caggcaagtt agcgattttg
       61 actagatttt tgtcaaaggc tgcggaaaga caattgccat tttttaagac gcttaaagga
      121 tgttcaactc agaagcattt tttctggact acggaagcag aaagcgcgtt tcaagaaatg
      181 aagcagttat tggcaacatt accaacatta actgcgccaa taaagggcga aattttatac
      241 ctttatgtct ctgttgcgaa cgaagctttc agctcagtat tggttgcaga gcgtgaaaaa
      301 gtgcataaac cgatttattt tgtaagtaaa gcacttacag gaagtgaaat taattatgcg
      361 ccaatgaaaa aattcgttta cgcattgctt ctaacatcaa gacggtctta tgaaattact
      421 tatttacctt ggacttctgt aaaggttcag gttttggcag attatcttgc agagatgact
      481 tgcgaattgg aagtaattca tgagcaaacg caattgcaac cagtgcgggg tgaaacatgg
      541 gatttattta ctgatggcgc atcgtgtgta gaaggcgctg ctgaatatga ggcgctgctt
      601 gcgggtttga acattgcgct taagctaaat gtcactaagt tgtgtacata tattgattca
      661 cagttggtat ctaatcagtt caatggatct tttgaagcat atgagctctc tatgcaaaaa
      721 tatttaaagt ttctgaaaga aactgcggaa aaatttgagc attttgagct cgtacaagtc
      781 tcaagaaatc aaaataaaaa ggcagacgct ttaagcaagc ttgcagcgtt aactttttca
      841 cattttcaaa aacaagtgtg ggtggaagag ttgcccagca aagcaattga tggcagttta
      901 gtttttgcgg cgatagaaga agaatgccca aattggatga aaccaatcat tgaaaatatg
      961 cgcaataata cactgccaga gaataaagaa gaagcaagat tggtgtgtat aagatcacct
     1021 atgtatacca ttgaaaatgg catcttgtat cgcaaatctt attatgggcc attaacgcgc
     1081 tgcgttggcc ccactgaggc agaagcgatc attgaagaag tgcatagcag ttcttgtgcg
     1141 ttgcattctg gctataaaac cattgcgaca aaaaatatgc gtatgggtta cttttggcca
     1201 actctgtatc gagatgttgc aaaaattgtt aaaaggtgca aaagttgcca aaggcgtgcg
     1261 ccgcagaata gaaggtcaag atacgacttg aatccagttt attcaccatg gccgttttat
     1321 aaatgggcaa ttgatattgt tggcccattc cctgctggtg caggaaacgt aaagattcct
     1381 aattgttga
//
LOCUS       XM_071831901             828 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841698), mRNA.
ACCESSION   XM_071831901
VERSION     XM_071831901.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..828
                     /gene="LOC139841698"
                     /note="uncharacterized LOC139841698; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841698"
     CDS             1..828
                     /gene="LOC139841698"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688002.1"
                     /db_xref="GeneID:139841698"
                     /translation="MALAHCIQVIKLSRLKLCGWVIFGHPYTAMLQKLLSVAKVAKGP
                     DNVKFLIVAIDYFTKWVEDKAVRTITGVQVQNFVWEYIVCRFSIPRELVSDNGAQIVK
                     EPFKIGRTDLNIVQKFTSVAHPHVNGLCEVTNCDIVSGIKKRLYEKRTGWVDELPNHR
                     VANFDEEANGEGLCENLNLIEERRLMATIREVNNKQQIAKYYNKTVRALSFDVGEWVL
                     RNNDASRAEKLGKLGPNWEGPYQVVAINSAGSYKLADIEGRTLPNAWHASLLKRDYA"
     misc_feature    124..372
                     /gene="LOC139841698"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atggctcttg cgcattgcat tcaggttata aaactatcgc ggctaaaatt atgcggatgg
       61 gttatttttg gccatcctta taccgcgatg ttgcaaaaat tgttaagcgt tgcaaaagtt
      121 gccaaaggtc ctgacaatgt taaattctta attgtggcaa ttgactattt tacaaaatgg
      181 gttgaagata aggcggttcg cactattact ggagtgcaag tgcaaaattt tgtgtgggag
      241 tatattgttt gcagatttag cataccgcgt gaattagtta gcgataatgg tgctcagata
      301 gtgaaagaac ctttcaaaat agggcgcact gatttaaata tagtccaaaa gtttacatca
      361 gtggcgcatc cacatgttaa tggcttgtgt gaagtaacca attgcgatat tgtgagcggt
      421 attaaaaaga ggttatatga gaagcgaact ggttgggtgg atgagctgcc caatcataga
      481 gtcgcgaact ttgatgaaga agcgaatggc gaaggcttat gtgaaaattt gaatttaatt
      541 gaagagcgaa ggttaatggc tactatcaga gaggtaaata ataaacaaca aatcgccaaa
      601 tattacaaca aaacagtacg cgctttgtct tttgatgtag gcgaatgggt gctgcgaaac
      661 aatgatgcga gtagagcaga aaaacttggc aaattaggac ctaactggga aggtccttat
      721 caagttgtgg caattaattc ggcaggatca tataaactcg cagacataga aggtcgaact
      781 ctccctaatg cgtggcatgc ttctttatta aagcgagatt atgcataa
//
LOCUS       XM_071831902            1506 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides shewanella-like protein
            phosphatase 1 (LOC139841699), transcript variant X1, mRNA.
ACCESSION   XM_071831902
VERSION     XM_071831902.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1506
                     /gene="LOC139841699"
                     /note="shewanella-like protein phosphatase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139841699"
     CDS             63..1235
                     /gene="LOC139841699"
                     /codon_start=1
                     /product="shewanella-like protein phosphatase 1"
                     /protein_id="XP_071688003.1"
                     /db_xref="GeneID:139841699"
                     /translation="MAMASLSSLNSLPMQPPSRKLIDSPSPPTSLNFGSSGNLKPIVI
                     SGDPPTFVSAPGRRIVAVGDLHGDLAKARGALELAGVLSSDGQDTWTGQETVLVQLGD
                     ILDRGEDEIAILSLLRSLQIQAKEYGGAVFQVNGNHETMNVEGDFRYVDSGAFDECSD
                     FLEYLDDCGHNWEDAFESWSEVSESWKEERKTSQSSWGPWNLVKRQKGVIARSILLRP
                     GGPLASELARHPVVLKVDDWVFCHGGLLPHHVTYGIEKINSEVSKWMINVNEDEGDES
                     QIPFIATRGYDSVVWNRLYSRDTSDLEDHHIEQIQSVLDTTLQVVGAKAMVVGHTPQT
                     TGVNCKYNCSIWRVDVGMSSGVLDSRPEVLEIRGNKTRVIRSESDSFSELQAADYI"
     misc_feature    240..1151
                     /gene="LOC139841699"
                     /note="Shewanella-like phosphatases, metallophosphatase
                     domain; Region: MPP_Shelphs; cd07425"
                     /db_xref="CDD:277368"
     misc_feature    order(252..254,258..260,366..368,378..380,471..476,
                     786..788,933..935,939..941,1050..1052)
                     /gene="LOC139841699"
                     /note="active site"
                     /db_xref="CDD:277368"
     misc_feature    order(252..254,258..260,366..368,471..473,786..788,
                     1050..1052)
                     /gene="LOC139841699"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:277368"
     polyA_site      1506
                     /gene="LOC139841699"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aattcgtggt tgtagtggaa gccgttcgcc attgcaaata tattctctca aagcttccaa
       61 caatggcgat ggcttcatta tcatctctta attcgctacc tatgcaaccg ccttctcgca
      121 agctcattga ttctccctca cctccaacgt ctcttaactt cggtagctcc ggcaacttaa
      181 aaccgattgt tatctccggt gatcctccga ccttcgtttc cgctcccggt cgtcgtatcg
      241 ttgccgttgg agatttgcac ggggacctag caaaagcaag gggcgcactt gagttagccg
      301 gtgtcttgag ttcagatggt caagacacat ggactggtca agaaacggtc ttggttcagc
      361 ttggagatat acttgacagg ggagaagatg aaattgctat attatcatta ttaaggtcac
      421 tacaaattca agctaaagaa tatggcggtg ctgttttcca ggtgaatgga aatcatgaaa
      481 ctatgaatgt cgaaggggat tttagatacg ttgattctgg tgcatttgat gagtgttccg
      541 actttctaga atatttggac gattgtgggc ataattggga agatgcattt gaaagttggt
      601 ctgaagtatc tgaaagttgg aaagaagaaa ggaaaacgtc tcagagttcg tggggaccgt
      661 ggaacttagt aaagcggcaa aagggagtaa ttgcaagatc gatactttta agacccggag
      721 gtccattggc atctgaattg gcacgtcatc ctgttgtgct aaaagttgat gattgggtct
      781 tttgtcacgg gggacttctt ccccaccatg ttacttatgg catagagaag ataaacagtg
      841 aggtatctaa atggatgatt aatgttaacg aagacgaagg cgacgagtca caaataccat
      901 ttatagctac tagaggttat gacagtgtcg tgtggaatcg tttatactct cgagatacct
      961 cggatttaga agaccatcac attgagcaga ttcagtctgt tcttgatacc acgcttcaag
     1021 tagttggagc gaaggcaatg gtggtgggac acactccaca aactacagga gttaactgta
     1081 aatataactg tagcatttgg cgtgttgacg tggggatgtc tagtggagtt cttgattcaa
     1141 gacctgaggt tctggaaata agaggcaata aaacgagggt aataaggagt gaatcagatt
     1201 cattcagtga acttcaggcg gctgattata tttagatcac tacaagtgag cagggtttgt
     1261 gagttacccc tacaggcatc taatgaagac ctgaaatgga tttggagatc aatgggacgg
     1321 cctgtgagtc catgttgggt caaatattaa ttgggcttgg atacatggca taaagctagg
     1381 tgtatgtatc atagcataga aagcttcagt cttatgtaga aaacttcatg tcattattgg
     1441 ggtctattta ttcatgtata tagaatatat aatattaata caaatataca aatatattaa
     1501 tataaa
//
LOCUS       XM_071831903            1499 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides shewanella-like protein
            phosphatase 1 (LOC139841699), transcript variant X2, mRNA.
ACCESSION   XM_071831903
VERSION     XM_071831903.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1499
                     /gene="LOC139841699"
                     /note="shewanella-like protein phosphatase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139841699"
     CDS             63..1235
                     /gene="LOC139841699"
                     /codon_start=1
                     /product="shewanella-like protein phosphatase 1"
                     /protein_id="XP_071688004.1"
                     /db_xref="GeneID:139841699"
                     /translation="MAMASLSSLNSLPMQPPSRKLIDSPSPPTSLNFGSSGNLKPIVI
                     SGDPPTFVSAPGRRIVAVGDLHGDLAKARGALELAGVLSSDGQDTWTGQETVLVQLGD
                     ILDRGEDEIAILSLLRSLQIQAKEYGGAVFQVNGNHETMNVEGDFRYVDSGAFDECSD
                     FLEYLDDCGHNWEDAFESWSEVSESWKEERKTSQSSWGPWNLVKRQKGVIARSILLRP
                     GGPLASELARHPVVLKVDDWVFCHGGLLPHHVTYGIEKINSEVSKWMINVNEDEGDES
                     QIPFIATRGYDSVVWNRLYSRDTSDLEDHHIEQIQSVLDTTLQVVGAKAMVVGHTPQT
                     TGVNCKYNCSIWRVDVGMSSGVLDSRPEVLEIRGNKTRVIRSESDSFSELQAADYI"
     misc_feature    240..1151
                     /gene="LOC139841699"
                     /note="Shewanella-like phosphatases, metallophosphatase
                     domain; Region: MPP_Shelphs; cd07425"
                     /db_xref="CDD:277368"
     misc_feature    order(252..254,258..260,366..368,378..380,471..476,
                     786..788,933..935,939..941,1050..1052)
                     /gene="LOC139841699"
                     /note="active site"
                     /db_xref="CDD:277368"
     misc_feature    order(252..254,258..260,366..368,471..473,786..788,
                     1050..1052)
                     /gene="LOC139841699"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:277368"
     polyA_site      1499
                     /gene="LOC139841699"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aattcgtggt tgtagtggaa gccgttcgcc attgcaaata tattctctca aagcttccaa
       61 caatggcgat ggcttcatta tcatctctta attcgctacc tatgcaaccg ccttctcgca
      121 agctcattga ttctccctca cctccaacgt ctcttaactt cggtagctcc ggcaacttaa
      181 aaccgattgt tatctccggt gatcctccga ccttcgtttc cgctcccggt cgtcgtatcg
      241 ttgccgttgg agatttgcac ggggacctag caaaagcaag gggcgcactt gagttagccg
      301 gtgtcttgag ttcagatggt caagacacat ggactggtca agaaacggtc ttggttcagc
      361 ttggagatat acttgacagg ggagaagatg aaattgctat attatcatta ttaaggtcac
      421 tacaaattca agctaaagaa tatggcggtg ctgttttcca ggtgaatgga aatcatgaaa
      481 ctatgaatgt cgaaggggat tttagatacg ttgattctgg tgcatttgat gagtgttccg
      541 actttctaga atatttggac gattgtgggc ataattggga agatgcattt gaaagttggt
      601 ctgaagtatc tgaaagttgg aaagaagaaa ggaaaacgtc tcagagttcg tggggaccgt
      661 ggaacttagt aaagcggcaa aagggagtaa ttgcaagatc gatactttta agacccggag
      721 gtccattggc atctgaattg gcacgtcatc ctgttgtgct aaaagttgat gattgggtct
      781 tttgtcacgg gggacttctt ccccaccatg ttacttatgg catagagaag ataaacagtg
      841 aggtatctaa atggatgatt aatgttaacg aagacgaagg cgacgagtca caaataccat
      901 ttatagctac tagaggttat gacagtgtcg tgtggaatcg tttatactct cgagatacct
      961 cggatttaga agaccatcac attgagcaga ttcagtctgt tcttgatacc acgcttcaag
     1021 tagttggagc gaaggcaatg gtggtgggac acactccaca aactacagga gttaactgta
     1081 aatataactg tagcatttgg cgtgttgacg tggggatgtc tagtggagtt cttgattcaa
     1141 gacctgaggt tctggaaata agaggcaata aaacgagggt aataaggagt gaatcagatt
     1201 cattcagtga acttcaggcg gctgattata tttagatcac tacaagggtt tgtgagttac
     1261 ccctacaggc atctaatgaa gacctgaaat ggatttggag atcaatggga cggcctgtga
     1321 gtccatgttg ggtcaaatat taattgggct tggatacatg gcataaagct aggtgtatgt
     1381 atcatagcat agaaagcttc agtcttatgt agaaaacttc atgtcattat tggggtctat
     1441 ttattcatgt atatagaata tataatatta atacaaatat acaaatatat taatataaa
//
LOCUS       XM_071831905            1242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841701), mRNA.
ACCESSION   XM_071831905
VERSION     XM_071831905.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1242
                     /gene="LOC139841701"
                     /note="uncharacterized LOC139841701; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841701"
     CDS             1..1242
                     /gene="LOC139841701"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688006.1"
                     /db_xref="GeneID:139841701"
                     /translation="MTDQPIKHILRNPESSGRLAKWAIELGEYEINFSPRHAVKGQIL
                     ADFLLETTEKVDHPPNVTASNHVWELHNDGASSEEGVGAGLVLTSLEGEEHTYALQFC
                     FYASNNEAEYEAFLSGLRIASEMGIKHLRAYFDSQIVAQQVNGAFEAKDASMKQYLQY
                     QEIKTRRQMDVLSKLATLTFDHLHKKVLVEVLKDKSVDEKIVVATVEEKESCWITPYV
                     KYLQDGTLAIDAMEARRIRVSAPLYVLENGILYRKSFSGPNLRCLTPHQAIDVVKEMH
                     EGLCAQHSGYRTIRHGTVQRLPKYDLISVSSAWTFCKWAIDIVGPFPRSVGNAKFLVV
                     AIDFFSKWVEAKVLAKITGENIKKFVWSDIVCRYGLPNEIVSDNGKHFVDNPFRSWCE
                     ELNIKQTFTSVRTHRPMGRSK"
     misc_feature    <4..144
                     /gene="LOC139841701"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    202..546
                     /gene="LOC139841701"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(217..228,316..324,331..333,403..405,544..546)
                     /gene="LOC139841701"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    937..1224
                     /gene="LOC139841701"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgacagacc aaccgataaa acatattttg agaaatccag agtcatcagg acgactagca
       61 aaatgggcaa ttgaattggg agaatatgaa ataaattttt cgcctcgaca tgcagtcaaa
      121 ggtcaaattt tggcagattt tttattagaa acaacagaaa aggtcgatca tccgccaaac
      181 gttacagcta gtaatcatgt ttgggagttg cacaatgatg gtgcatcaag tgaggaaggt
      241 gttggtgcag ggttagtact taccagtcta gaaggtgagg aacacacata tgcattgcag
      301 ttttgtttct atgcatcaaa taatgaagca gaatatgaag catttctttc cggcctccgc
      361 atagcgtccg aaatgggaat aaaacatttg cgtgcatatt tcgattctca aattgtagca
      421 caacaggtta atggagcgtt tgaagccaaa gacgcctcta tgaaacaata tttgcaatac
      481 caagaaataa aaacaagaag gcagatggat gttttgagca aattagcaac attaacattt
      541 gatcatttgc acaagaaagt tttggtggag gttttaaaag ataaatcggt tgatgaaaag
      601 atagtggttg caacagttga agaaaaggaa tcatgttgga taacccccta tgtgaaatat
      661 ttgcaggacg gaacattggc aatagatgcc atggaggcaa gacggataag agttagtgca
      721 ccactttatg tcctggaaaa tggaatactt tatagaaaat ccttcagtgg accaaattta
      781 aggtgtttaa caccacatca agcaattgat gtagtcaagg aaatgcatga gggattatgt
      841 gcacagcatt ccggttatag aactatacgg catggaaccg tacagcgttt acccaagtat
      901 gatttaattt cagtatcatc ggcatggaca ttttgtaaat gggcaattga catagtaggc
      961 cccttcccaa gaagtgtagg aaatgcaaaa tttttggttg ttgcaattga tttcttcagt
     1021 aagtgggttg aggcgaaggt attagctaaa ataactggtg aaaatatcaa gaaattcgta
     1081 tggagcgata tcgtgtgcag atatggatta ccgaatgaaa ttgtcagtga caatggaaaa
     1141 cattttgtag ataacccatt cagaagttgg tgtgaagaac taaatatcaa acaaacattt
     1201 acctcagtcc gcacccacag gccaatgggc aggtcgaagt ga
//
LOCUS       XM_071831906             639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841702), mRNA.
ACCESSION   XM_071831906
VERSION     XM_071831906.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..639
                     /gene="LOC139841702"
                     /note="uncharacterized LOC139841702; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841702"
     CDS             1..639
                     /gene="LOC139841702"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688007.1"
                     /db_xref="GeneID:139841702"
                     /translation="MQSDDFSEIPIVVSCKIAEADITVMKVHVDNGNSVDIIYEQCFD
                     QLPESIKTYLETTAVSLIGFAGESSLPIGVLPLNVELADVNDDALVRQARFDFYVMRA
                     SSRYNMLLGRTAIRQDLVDDADPMEIINLAYPEQKIKVGRNVSADIRKQIVLNVNPTL
                     KPVVQKRRGMAPDRVKWLCEEVTKLVRAGILREVQYQSWIANPVLVKKADGS"
ORIGIN      
        1 atgcagagcg atgatttctc tgaaattccg atagtggtat cgtgcaaaat cgcggaagct
       61 gacatcacag tcatgaaagt ccatgtcgat aacggcaata gcgtcgatat tatttacgaa
      121 caatgtttcg atcaactgcc agaaagtatt aaaacgtacc tggaaacaac cgcggtttcg
      181 ttaattggct ttgcaggaga atcctcatta cctataggtg ttttgccatt aaacgtcgag
      241 ctggctgatg taaatgacga tgccttggtg cgacaagcgc ggtttgattt ttatgttatg
      301 cgagcctcat ctcgttataa catgttgctg ggaagaaccg ctataaggca ggaccttgtt
      361 gatgatgcgg atcctatgga aataattaat ctcgcgtatc cagagcagaa aatcaaagta
      421 ggacgcaatg ttagtgcgga tattaggaaa caaatcgtgc tcaatgtaaa tccaacttta
      481 aagcctgtag tgcaaaagcg aaggggcatg gccccagatc gtgtaaaatg gctctgcgaa
      541 gaagtaacaa aattggtaag agctggaatt ctgcgcgaag ttcaatatca atcatggatt
      601 gcaaatccag tgttggtgaa aaaagctgat ggttcctag
//
LOCUS       XM_071831907             990 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841703), mRNA.
ACCESSION   XM_071831907
VERSION     XM_071831907.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..990
                     /gene="LOC139841703"
                     /note="uncharacterized LOC139841703; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841703"
     CDS             1..990
                     /gene="LOC139841703"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688008.1"
                     /db_xref="GeneID:139841703"
                     /translation="MIHSWQAGQRRKAETLEDWKQEMIAFPSMFNTNPSDAPVVIEAR
                     IENCVVGGIYTDTGAGADIMYEHCFIQLPDRVKEKLKDTFVPLESFANDPSWSEGSIV
                     LEVVLGKTPFKRTAHIEFLVVKANSQYNVILGRSAMMTFGAVMSTVHGMMKFPTPAGI
                     AMLYAERRRPIECVQINRTAVNPIIHEDGSISPNPEFPDQKIIIGNTIAKETKEKLYK
                     ILATNLDVFAWQDSDMTGVPRHVAEHKLGVNPNIPPVCQKKRGMAPDRTKFLREEVKK
                     LVDAGILRKVKYHTWVANLVMVRKPNNSWRMCVDFTDLNNACQKENYPLPEID"
     misc_feature    841..>987
                     /gene="LOC139841703"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgatacatt catggcaagc cggacagcgg agaaaagcag aaacattaga ggactggaaa
       61 caagaaatga ttgcttttcc ttccatgttt aacaccaatc catctgacgc tcctgtagtg
      121 attgaagctc gaatagaaaa ttgtgttgtt ggaggaatat atactgatac cggagcagga
      181 gcagatatca tgtatgaaca ttgttttata caactaccgg acagagttaa ggaaaagcta
      241 aaggacacat ttgttccctt agaaagtttt gctaatgatc cgtcatggtc agaaggaagc
      301 atagttttag aagtagtatt gggaaaaacg ccatttaaaa gaactgctca tatcgaattt
      361 ttggttgtga aagcaaattc acagtataat gtcattttag gacgatcagc catgatgaca
      421 ttcggagctg tgatgtcaac ggtacatgga atgatgaaat ttcccacacc ggctggcatc
      481 gccatgctat acgctgaacg gagaagacca atagaatgtg tacaaataaa cagaacagct
      541 gttaacccaa tcattcatga agatgggtca atatcaccaa atccagagtt tccagatcag
      601 aaaatcataa ttggaaacac aatagcaaaa gaaacaaaag aaaagcttta caaaatctta
      661 gccacaaatt tggatgtttt tgcatggcaa gattctgata tgactggtgt accacgtcat
      721 gtagctgaac ataagcttgg tgtaaatcct aatatcccac cagtgtgtca aaagaaaaga
      781 ggcatggctc cagatagaac aaaatttctc agagaagaag ttaaaaaatt ggtggatgct
      841 ggaatattga ggaaagtaaa ataccataca tgggtagcaa acctggttat ggtaagaaag
      901 ccaaataatt catggaggat gtgtgtagac ttcacagatt taaataatgc atgtcaaaaa
      961 gaaaattatc ctttaccaga aatcgactga
//
LOCUS       XM_071831908            1437 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841705), mRNA.
ACCESSION   XM_071831908
VERSION     XM_071831908.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1437
                     /gene="LOC139841705"
                     /note="uncharacterized LOC139841705; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841705"
     CDS             1..1437
                     /gene="LOC139841705"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688009.1"
                     /db_xref="GeneID:139841705"
                     /translation="MTDQPIKHILKNPESSGRLAKWAIELGEYEINFSPRHAVKGQIL
                     ADFLLETIEKVDHLQNVKASNHVWELHTDGASSEEGVGAGIKHLRAYVDSQIIAQQVN
                     GGFEAKDVSMKQYLQLVEKISKNFETLEVVQIPRNKNKKVGVLSKLATLTFDHLHKKV
                     LVEVLKHKSVDEKDGTLPTDAMEARRIRVSAPLCVLENGILYRKSFSGPNLRCLTPHQ
                     AIDVVKEMHEGLCAQHSGYRTIVGRIMRQGYYWQSIYKDTTDVIKTWPFCNWAIDIVG
                     PFQRSVGNAKFLVVAIDFFSKWVEAKVLAKLTGENIKKFVWNDIVCRYGLPNEIVSDN
                     GKQFADNPFRSWCEELNIMQTFTSVAHPQANGQVEVTNKEIVAGIKARLGLSQTKWVD
                     EVPYVLWAHRTMPKRSTGETPFSLVYGTEAMILAEIRVPIQRILAFDTENNSSILREN
                     LNLFEERRIMAAIRQANAKQKMAKYYNK"
     misc_feature    <4..144
                     /gene="LOC139841705"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    <250..447
                     /gene="LOC139841705"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    <808..1107
                     /gene="LOC139841705"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgacagacc agccgataaa acatattttg aaaaatccag agtcatcagg acgactagca
       61 aaatgggcaa ttgaattggg agaatatgaa ataaattttt cgcctcgaca tgcagttaaa
      121 ggtcaaattt tggcagattt tttattagaa acaatagaaa aggtcgatca tttgcaaaac
      181 gttaaagcta gcaatcatgt ttgggagttg cacactgatg gtgcatcaag tgaggaaggt
      241 gttggtgcag gaataaaaca tttgcgtgca tatgttgatt ctcaaattat agcacagcag
      301 gttaatggag ggtttgaagc taaagatgtc tctatgaaac agtatttgca attagttgag
      361 aaaatatcaa aaaattttga gaccttagag gttgtgcaga taccaagaaa taaaaacaaa
      421 aaggtaggtg ttttgagcaa attagcaaca ttaacatttg atcatttgca caagaaagtt
      481 ttagtggagg tcttaaaaca taaatcggtt gatgaaaagg acgggacact gccaacagat
      541 gccatggaag caagacggat aagagttagt gccccacttt gcgttctgga aaacggaata
      601 ctttatagaa aatccttcag tggaccaaat ttaaggtgtt taacaccaca tcaagcaatt
      661 gatgtagtca aggaaatgca tgaaggatta tgtgcacagc attccggtta tagaactata
      721 gttggacgga ttatgcgaca agggtattat tggcaatcaa tttacaaaga tacaacagac
      781 gtaattaaga catggccatt ttgtaattgg gcaattgaca tagtaggccc atttcaaaga
      841 agtgtgggaa atgcaaaatt cttggttgtt gcaattgatt tcttcagtaa gtgggttgaa
      901 gcgaaggtat tggcaaaatt aactggtgag aatataaaga aattcgtgtg gaacgatatt
      961 gtgtgcagat atggattacc aaatgaaatt gtcagtgaca acggaaaaca gtttgcagat
     1021 aaccccttca gaagttggtg tgaagagcta aacatcatgc aaacatttac ctcagtggct
     1081 cacccacaag ccaatgggca agttgaggta acaaacaaag aaattgtagc cggcataaag
     1141 gctaggttgg gtttgagtca gactaagtgg gtagatgaag tgccatatgt attgtgggct
     1201 caccgcacaa tgccaaaacg gagcacgggt gaaacaccat tcagtttggt atatggcacc
     1261 gaggcaatga tactagctga aatccgtgtt ccaatacaaa ggattttggc atttgataca
     1321 gaaaataatt catccatctt acgtgaaaac ttgaatttat ttgaagaaag gcgaatcatg
     1381 gccgccatcc gtcaagcgaa tgcaaaacag aaaatggcaa aatattataa caaatga
//
LOCUS       XM_071831910             672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841706), mRNA.
ACCESSION   XM_071831910
VERSION     XM_071831910.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..672
                     /gene="LOC139841706"
                     /note="uncharacterized LOC139841706; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841706"
     CDS             1..672
                     /gene="LOC139841706"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688011.1"
                     /db_xref="GeneID:139841706"
                     /translation="MLLQVARSIKAELIPTTVSLSGFVEESAWLVGQLQLKIELVDEI
                     DAKLLRQAWLDLYVIRSASRYNMLLGRSALSKFGIIPSTIYGMIKFSTCKGVATMNSA
                     IILPICANVNMQGAIIDIADAQNNLAIINRAYPEQTIKVGCNVDVNIKQKLVQMLIAN
                     MDVFASCEQDMTGVPRKIADHRLNANPALKPIIQKHRGMAPDRMQWLSGEVAKLVKAG
                     ILREE"
ORIGIN      
        1 atgcttttgc aagttgccag aagcattaaa gcagaattga tacctactac ggtttcgcta
       61 tctggttttg tagaagaatc tgcatggctg gttggacaat tgcagctcaa aattgagctt
      121 gttgatgaaa tagatgcaaa attgttgcgc caagcatggc tagatctgta cgttatacga
      181 tctgcttcgc gctataatat gttgttggga cgctctgcat tgtcaaaatt tggtataatc
      241 ccttcgacta tatatggaat gataaaattc tcaacgtgta agggtgttgc aacaatgaat
      301 tctgcaatca tactaccaat ctgtgcaaat gttaacatgc aaggcgcaat aatagatata
      361 gctgatgcgc agaataattt ggctattata aatcgtgctt atccagaaca gacaatcaaa
      421 gttggctgta atgtggatgt gaatatcaaa caaaaattag tgcaaatgct aattgcaaat
      481 atggatgtct ttgcatcgtg tgagcaagac atgactggtg ttccgcgaaa aatagcggat
      541 catagactta atgcaaatcc tgcgctaaaa ccaataattc aaaagcacag aggtatggct
      601 ccagaccgca tgcagtggtt atctggagaa gttgctaagc ttgtaaaagc aggaattttg
      661 cgagaggaat aa
//
LOCUS       XM_071831911             480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841707), mRNA.
ACCESSION   XM_071831911
VERSION     XM_071831911.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..480
                     /gene="LOC139841707"
                     /note="uncharacterized LOC139841707; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841707"
     CDS             1..480
                     /gene="LOC139841707"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688012.1"
                     /db_xref="GeneID:139841707"
                     /translation="MQKYLKFLKETAKKFEHFEFAQVLRSQNKKPNALSKLAALTFSH
                     FQKQIWVEELPSKAIDGSLVVAAIEEECPNWMSPIIENLPNNILLEDKDEARLVRIRS
                     PMYTIENGILYRNTYYGTLMHCVGPTEAEVIIEEVHSGSCALHSGYKTIASNIFLLG"
     misc_feature    <1..117
                     /gene="LOC139841707"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgcaaaagt atttaaagtt tctaaaagaa actgcgaaaa aatttgagca ttttgagttt
       61 gcacaagttt taaggagtca aaacaaaaag ccaaatgcat taagcaaact tgcagcctta
      121 actttttcac attttcaaaa gcaaatttgg gtagaagagt tgcccagcaa agcaattgat
      181 ggtagtttag ttgttgcggc aattgaagaa gaatgcccaa attggatgag tccaatcatt
      241 gaaaatctgc ccaataatat actgctggaa gataaagatg aagcaagatt agtgcgtata
      301 agatcgccta tgtataccat tgaaaatggt atcttatatc gcaatactta ttatgggaca
      361 ctaatgcact gtgttggtcc cacagaagca gaagtgatca ttgaagaagt gcatagcggt
      421 tcttgtgcat tgcattctgg ctataagact attgcgtcta acattttttt gttgggttaa
//
LOCUS       XM_071831912            1805 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At2g23200 (LOC139841708), transcript variant X1,
            mRNA.
ACCESSION   XM_071831912
VERSION     XM_071831912.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1805
                     /gene="LOC139841708"
                     /note="probable receptor-like protein kinase At2g23200;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139841708"
     CDS             150..1097
                     /gene="LOC139841708"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At2g23200
                     isoform X1"
                     /protein_id="XP_071688013.1"
                     /db_xref="GeneID:139841708"
                     /translation="MKSSITKFSHLQIPLEDVLKATNNFDDKNVIGRGGLSEVYKGRM
                     FLSGKWVNIAARRFYSKHKHSIEFLREISALSSLKHENIVSIIGFCDEHDEKVIIMKR
                     EAKGSLEMHLRKPITWIQRLRISIGIARDLSYIHNEGSLIHLNINSSTILLDNKFEPK
                     LSGFEYSINHPVHRKDDVVLSKAIGTRAYMDPEMLKTGGVTHKSDIYSFGVVLLEILC
                     GRKDDDLFLVSLSKLKNENNELLKSIPASLYRQMGKKSCQAFVLNALYCLKDERVQRP
                     DMKYIVQELEKALEFQLPYESLIILQVLTISQWILQNGL"
     misc_feature    240..1010
                     /gene="LOC139841708"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(240..251,258..260,264..266,309..311,315..317,
                     399..401,447..458,582..584,594..599,603..605,633..638)
                     /gene="LOC139841708"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 ttatattatg cgtgtgtgtg cgtgcataaa agcataaagt ttgcaatcca aatatttttt
       61 tctattgata aagcaatagc ttaaattcca ttcctttgtt tttatactct ttcataagat
      121 aaatagtttt ttgctatcca aaaagagata tgaaatcttc aatcacgaag tttagtcact
      181 tacagatccc acttgaagac gtactaaaag ccaccaacaa ctttgatgat aaaaatgtca
      241 tcgggcgtgg tggattgagc gaggtttata aagggcgaat gtttttgtct gggaaatggg
      301 tcaatattgc tgctcggaga ttttacagta agcataagca cagcatcgag ttcttaagag
      361 aaatttcggc gctttctagt ctcaagcatg aaaacatagt ctctattatc gggttttgtg
      421 atgaacatga tgaaaaggtc atcataatga agcgtgaggc caagggaagc ctcgaaatgc
      481 atttaagaaa accaatcaca tggattcaaa ggttgaggat aagcattggt attgcgcgtg
      541 atttaagtta catccataat gaaggaagtc taatacatct taatatcaac agctctacga
      601 tattattaga taataagttt gagcctaagt tatccggatt tgaatattcc atcaaccatc
      661 cagtacatcg aaaggatgat gttgttcttt caaaagctat tggaacaaga gcgtatatgg
      721 accccgaaat gttaaagacg ggtggtgtga cccacaagtc cgatatctac tcatttggtg
      781 tcgtattatt ggaaatatta tgtgggagga aagatgatga tttgtttctg gtttcactaa
      841 gcaaattgaa aaatgaaaac aatgaattac tgaaatcaat tccggctagc ttatatcgtc
      901 aaatgggtaa gaaatcatgc caagctttcg tattaaatgc attatattgt ttaaaggatg
      961 agcgagtaca acgcccagat atgaagtata ttgtccagga acttgagaag gcattggaat
     1021 ttcagctgcc atatgaaagt ttaattattt tgcaagtatt gacaatttct caatggatcc
     1081 tgcaaaacgg actttgacgc aagaaagaga atatctacag cgcagtcgta catttttctt
     1141 tagagtacca aagaatttag tgggcttata tgttggacat gttgttggcc taagcaatcc
     1201 taccggataa actaggcttt ggaataagac ctagtcaatg ggcgaaatgg agaaggattt
     1261 agttatgaaa taaggctaac caaagttaaa aagaatttta gtggcacaaa ctgaagtcta
     1321 atctgcggac ggtaacttag aagtagttta ttagcaaatt tgtcatagtg aagttataca
     1381 aaagacaatc taggcatcga aaatactgac attggacact tactatatta taaccctttt
     1441 tatcttacaa tacaaatctt gtaccctgtt ttatatttgg tggtggtggg gggttacgat
     1501 atagtttctt ttcaagtaaa agccttatgt ttttcacttg ttgttgcaga gagtaaactt
     1561 ggaacactcg gtgtctcaac tcagtcactt aaagaccaga cttgctgata taactctagc
     1621 taccgataac ttttctgacg agtacagcat ctttgaaacc atgtactatg acatatatag
     1681 agcagaaatg gaactttggg ataaagaaaa ttttgactct ataaaagaga agaacagaag
     1741 tgatgaacgt tccgagagac gcaccactgt atttataaaa cgcttgcgcc ctagagaaga
     1801 cgaac
//
LOCUS       XM_071831913            1980 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At2g23200 (LOC139841708), transcript variant X2,
            mRNA.
ACCESSION   XM_071831913
VERSION     XM_071831913.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1980
                     /gene="LOC139841708"
                     /note="probable receptor-like protein kinase At2g23200;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139841708"
     CDS             150..1082
                     /gene="LOC139841708"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At2g23200
                     isoform X2"
                     /protein_id="XP_071688014.1"
                     /db_xref="GeneID:139841708"
                     /translation="MKSSITKFSHLQIPLEDVLKATNNFDDKNVIGRGGLSEVYKGRM
                     FLSGKWVNIAARRFYSKHKHSIEFLREISALSSLKHENIVSIIGFCDEHDEKVIIMKR
                     EAKGSLEMHLRKPITWIQRLRISIGIARDLSYIHNEGSLIHLNINSSTILLDNKFEPK
                     LSGFEYSINHPVHRKDDVVLSKAIGTRAYMDPEMLKTGGVTHKSDIYSFGVVLLEILC
                     GRKDDDLFLVSLSKLKNENNELLKSIPASLYRQMGKKSCQAFVLNALYCLKDERVQRP
                     DMKYIVQELEKALEFQLPYESLIVITHLVLYPVT"
     misc_feature    240..1010
                     /gene="LOC139841708"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(240..251,258..260,264..266,309..311,315..317,
                     399..401,447..458,582..584,594..599,603..605,633..638)
                     /gene="LOC139841708"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 ttatattatg cgtgtgtgtg cgtgcataaa agcataaagt ttgcaatcca aatatttttt
       61 tctattgata aagcaatagc ttaaattcca ttcctttgtt tttatactct ttcataagat
      121 aaatagtttt ttgctatcca aaaagagata tgaaatcttc aatcacgaag tttagtcact
      181 tacagatccc acttgaagac gtactaaaag ccaccaacaa ctttgatgat aaaaatgtca
      241 tcgggcgtgg tggattgagc gaggtttata aagggcgaat gtttttgtct gggaaatggg
      301 tcaatattgc tgctcggaga ttttacagta agcataagca cagcatcgag ttcttaagag
      361 aaatttcggc gctttctagt ctcaagcatg aaaacatagt ctctattatc gggttttgtg
      421 atgaacatga tgaaaaggtc atcataatga agcgtgaggc caagggaagc ctcgaaatgc
      481 atttaagaaa accaatcaca tggattcaaa ggttgaggat aagcattggt attgcgcgtg
      541 atttaagtta catccataat gaaggaagtc taatacatct taatatcaac agctctacga
      601 tattattaga taataagttt gagcctaagt tatccggatt tgaatattcc atcaaccatc
      661 cagtacatcg aaaggatgat gttgttcttt caaaagctat tggaacaaga gcgtatatgg
      721 accccgaaat gttaaagacg ggtggtgtga cccacaagtc cgatatctac tcatttggtg
      781 tcgtattatt ggaaatatta tgtgggagga aagatgatga tttgtttctg gtttcactaa
      841 gcaaattgaa aaatgaaaac aatgaattac tgaaatcaat tccggctagc ttatatcgtc
      901 aaatgggtaa gaaatcatgc caagctttcg tattaaatgc attatattgt ttaaaggatg
      961 agcgagtaca acgcccagat atgaagtata ttgtccagga acttgagaag gcattggaat
     1021 ttcagctgcc atatgaaagt ttaattgtta ttacacattt ggtcctttat ccggtgacat
     1081 gagcaacatc ttagtgagca agatctcggt tagaaagcat aaacctttga tggataaaag
     1141 caagggccca agcgtgtcaa agaattcgaa gaagaaagag gtcgcggagt gtatgttggc
     1201 ggatgatgac ttgggagtag gtggttcatc agttattaag aagaataata ttgtggacga
     1261 ttttgaggag gacgttattc cgattcattc ctcctcgtcg gagttagata cgaactttcc
     1321 gttttctact cgttcggttt tcgatgatta acggtaaact acttaaactg atctccaaat
     1381 acaaggttga tagcgcgaaa gtggagcaat ttcggaagac tatggaccat ttgtttggtg
     1441 ggttaaactc atcgcgtcgg ctatttagac gtttactttt tttctcgttt ctttcttgtg
     1501 ggttcctttt tatttagttt cttgtggttt gttttcttgt ttgtttacgg actaggatgt
     1561 tgtgctctca gtgtagttat tctggatttg ttttgttttt tagtttagtg tgtcgtgtga
     1621 aggataccaa aacaaaagag aaattcgaaa acacatcgag gcgcgccgcg ggcctacttg
     1681 gcgcgacgcg gcctacacgc atacaagtgt ttgatttggg agaaagcttc tggtccggat
     1741 ttacacgtgg aggcgtgatg cggcccctcc tgggtgcgcc gcggccttgg tctcacagga
     1801 aggaaacttc cagatttgat ttttcttgct ccttaagttg ttgtatgcct ataaatacat
     1861 cttattgtaa ccctaaactc tatgtacgaa aatatcaaca aaaatcactc tagttagccg
     1921 tggactaaag caatctaacc gattgcatat aaccacgtaa ttcttgtgtc gttttcttta
//
LOCUS       XM_071831914             876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841709), mRNA.
ACCESSION   XM_071831914
VERSION     XM_071831914.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..876
                     /gene="LOC139841709"
                     /note="uncharacterized LOC139841709; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841709"
     CDS             1..876
                     /gene="LOC139841709"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688015.1"
                     /db_xref="GeneID:139841709"
                     /translation="METSFWNEPWCGGVCFRTAFPRLYRLDLNKNCLVAERVKWTEDS
                     VEFNWEWSGDPKWRAVSELTNLTEKLSNYVPSGKIKDEWKWMYHNSGIFSTKFLTKII
                     GEVSVASRATTEPTILNPFLPQKVSIFIWRASQNKLPVRTELDKRGVDLYSTRCPVCD
                     DDIETLHHSIISCNVAKDVWEKIRKWWRLDHLLINDISDLSKATNPKFKNPLVASIWQ
                     AVVWVSSYFLWKNRNDHVFGNKPPSPSKILADIQSRSFEWINCRAKKVCIEWLSWFTD
                     PLASVLSANSREGIG"
     misc_feature    <349..537
                     /gene="LOC139841709"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggagacaa gcttttggaa cgaaccatgg tgtggaggtg tttgctttcg tactgctttt
       61 ccaagattat acagattgga tctcaacaaa aattgtttgg tcgctgaaag agtcaaatgg
      121 actgaggatt ccgtcgaatt taactgggag tggagcggtg acccgaaatg gagagctgtc
      181 agcgagttaa caaatctcac tgaaaaacta tcaaactatg taccttcggg aaaaataaaa
      241 gacgaatgga aatggatgta tcataacagc ggaatttttt ctaccaaatt ccttacgaaa
      301 atcatcgggg aagtgtctgt tgcttcccga gccactaccg aacctaccat tcttaatcct
      361 tttttacccc aaaaggttag tattttcata tggagagcat cacaaaataa actgcctgtc
      421 cgaaccgaac ttgacaaacg tggcgtcgat ctttattcta ctagatgtcc ggtatgcgac
      481 gatgatatcg agacacttca tcattctatc atatcttgta atgtcgctaa agatgtttgg
      541 gaaaagattc gaaagtggtg gcgtcttgac caccttctta ttaatgacat ctctgactta
      601 tcaaaagcta ctaacccgaa attcaaaaac ccactcgttg cttctatttg gcaggcggtt
      661 gtatgggttt cgagttattt tctttggaaa aaccgaaacg atcatgtttt tggaaataag
      721 cctcctagcc cttcaaagat tctagccgat atacaatcga gaagctttga atggatcaat
      781 tgtcgtgcaa agaaggtgtg tattgaatgg ctaagctggt tcacagatcc attagcctct
      841 gttttaagtg ctaattcaag agaaggaatt ggttaa
//
LOCUS       XM_071831915            3988 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841710), mRNA.
ACCESSION   XM_071831915
VERSION     XM_071831915.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 44% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3988
                     /gene="LOC139841710"
                     /note="uncharacterized LOC139841710; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841710"
     CDS             1..1857
                     /gene="LOC139841710"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688016.1"
                     /db_xref="GeneID:139841710"
                     /translation="MRVFFKRYGTVKDLYVPNKLLKNGKPFGFVRFEGIKDVNHLLIR
                     LNTIYLNGNWLRAYKAFDRNNSSNVKQTNQRNPHPQPQNPPATQEQEPKIRTQYVPKT
                     QTNNNTNPTHSNAFRDNRSFNEVIDSSRNLPNTLDKPRVICIDEEETNKDVLKYAIMG
                     EIIDIDLIEQFPTLCVAEGLTKFNIKYLGGLDLCLIFDNEETVTNILNTQDHILRNWL
                     KNIRRIEDKCFQTSRLTWLNIKGVPISCWSEKNFKKIAGWYGPTYDFHNCSFNDGRGR
                     YLSSQSDPNYNSDHQLEDELSENESDYEDEPLSPPVEALPKFTGSDDSSRYFATSADH
                     FSTNIDLENTQKINDSNNYVNDTAELISNTESNGTIPQKSKIDDSNILERHQHLEEIS
                     SINDSGKLPKTDNQKISPECVNPTGPNIRLPSPIANPASLPQDPISPTHLNPIDLSPL
                     SSPKANPTPVVHTEPSFNHPSLSIQIPQVEKNDDPLGLSNSCFNLNSPLPSEGMNNSN
                     PVFAFKSKPSNNRYNQSVNRNVKVSACKKVKKNAEEVSHKKRKRYEGQTASSSSNLLW
                     SNIRKWNGSSKLRYAKAQARLPSKKRDTKPISNSNICSKKRLLSLYQITPLV"
     misc_feature    <10..168
                     /gene="LOC139841710"
                     /note="RNA recognition motif. (a.k.a. RRM, RBD, or RNP
                     domain); Region: RRM_1; pfam00076"
                     /db_xref="CDD:425453"
     misc_feature    436..768
                     /gene="LOC139841710"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
     misc_feature    <1096..>1455
                     /gene="LOC139841710"
                     /note="intestinal colonization autotransporter adhesin
                     MisL; Region: PRK15313"
                     /db_xref="CDD:237940"
ORIGIN      
        1 atgagggtct tcttcaaaag gtatggcacc gttaaagatc tttatgttcc taataaactt
       61 ctgaaaaatg gtaaaccttt tggatttgta agatttgaag gtatcaaaga cgtaaatcac
      121 cttctaatac gacttaacac aatctacctg aacggcaatt ggctgagagc ctacaaagcc
      181 ttcgatcgaa acaattcttc caatgtcaag caaaccaacc aaaggaatcc acacccccaa
      241 ccacaaaacc caccagcaac ccaggaacag gaaccgaaaa tcagaaccca atatgtccct
      301 aaaacccaaa ccaacaacaa tacaaatcca acccatagca atgcttttag agacaacagg
      361 agcttcaatg aagtgattga ctcaagcaga aacctcccca atacacttga caaacctaga
      421 gtaatctgca ttgatgaaga agaaacaaac aaagatgtat taaagtatgc tatcatgggg
      481 gaaataatcg acatagattt aatagagcag ttccccactt tgtgtgtagc agaagggtta
      541 accaagttca atatcaaata tctaggtggt ttggatcttt gtttgatttt cgataatgaa
      601 gaaaccgtta caaacatctt gaatacacaa gaccatattt taaggaattg gttaaaaaat
      661 attcgtagga ttgaagacaa atgctttcaa acatcaagat taacgtggtt gaacatcaaa
      721 ggtgtcccga tttcatgttg gtccgagaaa aattttaaga aaattgcagg gtggtacggt
      781 cccacttacg acttccataa ttgctccttc aatgatggaa gaggcagata cctcagctca
      841 caatctgacc caaattacaa ctcagatcac caattggagg atgaattatc tgaaaacgaa
      901 tcggactatg aagatgaacc cttatcaccg ccggttgaag ccctgccaaa attcaccggt
      961 agcgatgatt cctccaggta ttttgccacg tcagcagatc acttcagcac caatattgac
     1021 ctcgaaaata cacaaaaaat caatgatagc aataattatg tcaacgatac ggcagagttg
     1081 atttccaaca ccgagtctaa cggtactatc ccacaaaaat ccaaaataga cgattccaat
     1141 atcctcgaaa gacaccaaca ccttgaagaa atctcgtcaa ttaatgattc tggtaagctc
     1201 ccaaaaacag ataaccaaaa aataagcccc gaatgtgtta acccaactgg cccaaacatt
     1261 agacttccaa gcccaatcgc caacccagca agcttacctc aagacccaat tagcccaacg
     1321 catttaaacc caattgactt gagtccatta tcctccccta aagcaaaccc aacacctgta
     1381 gttcataccg aaccttcatt caaccatccc tccctatcta ttcagattcc ccaagtagaa
     1441 aaaaatgacg atcctcttgg attatctaac tcttgtttca accttaattc tcctttacct
     1501 tctgaaggta tgaacaactc aaatccagtt tttgctttca agtccaaacc ctccaataat
     1561 agatataatc agtctgtaaa tagaaatgta aaagtgagcg cttgtaaaaa agtaaagaag
     1621 aatgcagagg aagtttcaca taagaaaaga aaaagatatg aaggccaaac agcatcttca
     1681 tcctcaaatc tcctctggtc caatataagg aagtggaatg gttcatctaa actacgttac
     1741 gctaaagctc aagctagatt accttctaaa aagcgtgaca ccaaacccat atctaactca
     1801 aatatatgca gcaaaaaaag acttctgtct ctttatcaga taactccctt agtgtgaatc
     1861 aaattggaat cactctcgga ttatcaaaaa ggaatgccca acagtgacag ttctaggtga
     1921 ttttaatgag gtgcgattct cttcggaaag aaaaaacacc aagttctgcg aaccagagca
     1981 gcccgtttta actcattcat taaagataac aatctctttg atatcccgtt gggcggaaga
     2041 atatacactc gtatcagcga taatgggagc aagttcagta aactagatag atttcttgtt
     2101 ttggaaaact tcatcaacca atggccgaat tcaaacgctt tggtacttga taagaaatac
     2161 acggatcatt gtcctatctt attaaaagat ggcgaggtcg attttggtcc taaacccacg
     2221 aaagtgtttg acgtttggct gaaccaaaag gaatctcatg acgtcattaa aaaagcgtgg
     2281 gatttggaag tcaggagcac aaaacctgat tgtatttttc gggaaaaatt gaaaaatgtt
     2341 aagactgggc ttcgaaaatg gtattccacc tcacctggta aaatcatctc ctaaatcgag
     2401 gagcttacta aagttgtaaa tgaatgggaa gtaaaagcag aacaagctga cctcaacgaa
     2461 gaacagagac tagcttggtt gaaagatcgt gattgtcttt ttcaaaaaga gaagacccac
     2521 aacgaaatgc taaaaaaaaa aatcacgttt caaatgggca ttggagggag acgagaatag
     2581 taagtttttc cattcgataa tccgtaaaag acaacataat aataacatac atgggattaa
     2641 tgtggcgggt ctatggtcgt ctaacccttc ggaaataaaa aaggaagccc ataacttttt
     2701 ttaaaaactt ttcgaaaaaa aagaaaaaga aaataatttt gaactaaatg actggaatgg
     2761 acctagaatt gatcaaatca aggctgaaag tcttgaatct aggtttagtg aatctgaggt
     2821 tctcgaagca ataaagggct gtggcaaaaa caaagccccg ggtccgaacg ggtttaattt
     2881 tctattcttc acaaagtttt gggatatcat caaaattgat cttttgaagg ctattaattg
     2941 gttttgggaa tcaggctcta tttctaacgg ttgcaacacg tgctttatca cacttatttc
     3001 taaagtgcac gaccctttaa acttttctaa ctttagaccc attagtctca ttggtagcta
     3061 ttataaaatt ctcgctaaaa tactttcaaa tagaattagg aaaaccgtcc cgtggctaat
     3121 aggtgaggaa caaagcgctt ttattagtgg tagatatatc ctcgacagtg ttttagtagc
     3181 acttgaaacc atagatgact taaaagagaa aaaacaaaaa agtttcattt ttaaagttga
     3241 ttttgaaaaa gccttcgatt gtcttgattg ggattttctt aaaaagatct tgggctttat
     3301 gggttttgga gaaaaatgga tcaaatggat taacgcttgt cttacttcca cctctatctc
     3361 cgtgctcatc aatggttccc caacggagca attttttccg gaaagaggtg taagacaagg
     3421 agacccgctc tctcctttcc ttttcattat cgctagtgaa ggactaaact atctccttaa
     3481 tttggcaata aagaaaaaac taataagtgg tgttgaggtt ggtcgtgata aagtggtagt
     3541 ttcccattta taatatgccg atgatacaat tatttttggt aaatggaata aattggaagt
     3601 gagaaacacc ctaaaaattt taaaatgttt tgaagacctc tcgggtctaa aaatcaacct
     3661 aaacaaaagt tgtgcttacg ggattggaac ctcaaaagat gaattaagtt tattagcctc
     3721 ttggtttgga tgcaaggagg gttcctttcc ttttaattat ctcgggctcc cgataggtga
     3781 aaacctaaaa tcacataaaa gttggaaacc tgttttcgat aaattcaaga accgcctatc
     3841 ggattggaaa gcgaaatcca tctcttttgg aggaagactc actttaatca aatcggtctt
     3901 aagtggtctt cctctatatt acttctcgct tttcaaagcc ccacttggtg tcatcaaaga
     3961 attggaaggt ttgcgtcgtg attttttt
//
LOCUS       XM_071831916            1290 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841711), mRNA.
ACCESSION   XM_071831916
VERSION     XM_071831916.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1290
                     /gene="LOC139841711"
                     /note="uncharacterized LOC139841711; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841711"
     CDS             1..1290
                     /gene="LOC139841711"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688017.1"
                     /db_xref="GeneID:139841711"
                     /translation="MVRPRAPATPTYTLTAEQFQQLLAAAQGGGAAQAPPYNYATHTL
                     SGSALTWWNAHCQTVGIDVANATPWNTVKRMMTDKYCPRNQVQKLEAEFYGHVVKNDD
                     IESYNHHFLELASLCPSMVTPLYKMIEKYVEGLPSDIQGNVISAGKETIEGAMLLAQD
                     LVMAARRNKAISKTAEVKTGDNKRKFDNQSNSPSQNSGKKPVDGKPRCNRCEKNHYGR
                     CMVPCTNCKKTGHLAKNCRLPAATASAAKAYVPTCYGCGEKGHIKPNCLKKKTDAGNA
                     KGRAFVMTTEEARDDDEVITGTFLVNNFYATVLFDSGADRNLLPVELGSFDVVVGMDW
                     LSPIKAGIMCFDKTINIPLENDETLIIQGEKSGSKLNLISCIKTRKYLMKGYQAILGH
                     VKEVKPDEKRVEDVPIVRDFPEVFPEELPGFKCLFED"
     misc_feature    112..405
                     /gene="LOC139841711"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <601..798
                     /gene="LOC139841711"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    826..1047
                     /gene="LOC139841711"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atggttcgcc cacgagctcc agctactcca acttatacct taactgcaga acaatttcag
       61 cagctacttg ctgcagctca aggcggtggt gctgctcaag ctccgcccta caattatgcc
      121 acccacaccc tttctgggag tgctctgacc tggtggaatg cccattgcca aactgtgggg
      181 attgatgttg ctaacgctac tccatggaat accgtcaaaa gaatgatgac cgataagtac
      241 tgtcctagga atcaggtcca gaaattggag gccgaattct atggacacgt ggtaaagaat
      301 gacgacatag agtcatacaa tcatcatttt ctggaactag catccttgtg tccatctatg
      361 gtcaccccct tatacaagat gatagaaaag tatgttgagg gtctaccttc tgatatccag
      421 gggaatgtta tatctgctgg taaggaaact attgagggtg ctatgctgtt agcccaagat
      481 ttagttatgg ctgctagaag aaataaggca attagtaaaa cagctgaggt aaagacaggg
      541 gataacaaaa gaaagtttga caatcagagt aatagtccca gccagaactc aggtaagaag
      601 ccagttgatg ggaaacctag atgtaaccga tgtgagaaaa accactatgg gagatgtatg
      661 gtaccgtgca ccaactgcaa gaaaacaggt catcttgcca aaaactgtag acttcctgct
      721 gctacagctt cagccgcaaa ggcctatgtc cctacctgtt atggttgtgg ggaaaaaggt
      781 catatcaagc ctaactgtct aaagaagaaa actgatgctg gtaatgctaa aggcagggct
      841 tttgtcatga ctactgaaga agcccgtgat gatgatgaag tgataacggg tacgttcctt
      901 gttaacaact tctacgctac tgttctattt gattctggtg ctgatagaaa cttgttacca
      961 gtcgagttgg gaagctttga tgtagttgta gggatggatt ggttatcccc aataaaggcg
     1021 ggaattatgt gcttcgataa aaccattaac attccccttg agaatgatga aaccttaatc
     1081 attcaaggag aaaagagtgg ttcgaaactt aacctcattt catgtatcaa aacccgcaag
     1141 tacctaatga aagggtacca agccattcta ggtcatgtaa aggaagtcaa accagatgaa
     1201 aaacgagttg aagatgtacc gatagttaga gactttcctg aagtgtttcc tgaggaactc
     1261 cctgggttca agtgtctatt cgaagattga
//
LOCUS       XM_071831917             927 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841712), mRNA.
ACCESSION   XM_071831917
VERSION     XM_071831917.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..927
                     /gene="LOC139841712"
                     /note="uncharacterized LOC139841712; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841712"
     CDS             1..927
                     /gene="LOC139841712"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688018.1"
                     /db_xref="GeneID:139841712"
                     /translation="MALSKGTKLITTCQNELENEEPSMRSTSDTDVHMIHSWVVGQRR
                     KSGVLDEWKHEPIIFPSLFNINPSSDPVIIRAHISNCQIGRIYTDTGAGAEVIFEYCF
                     LQLPENIRRQKKAATSPLAGFNCTATWPVGSITLEVVLGTLTFQSTVDIEFSIVKTDS
                     LYNVILGRNAMQKFGAIASTVHGMLKFPTPAGIATIRTQEMEPIECMQIFNGSSDIFV
                     HDDGYVSPNPKHPDQRIQIGTTLSTNARDTLCKLLAPSIDVFAWEPSDMTGVPRDIAQ
                     HRLNVNPNITPVIQKKREMALERSEFLDNEVQ"
ORIGIN      
        1 atggcgctat ctaaaggtac gaaattaatc acaacttgcc aaaacgagct agaaaacgaa
       61 gaaccaagca tgcgcagcac cagcgacacc gatgttcata tgattcattc atgggtcgtg
      121 ggacagagac gaaaatcagg ggtgttagat gaatggaaac acgaacccat cattttcccc
      181 tcattattta acatcaaccc atcttcagac ccagttatca tacgagcaca tatctccaat
      241 tgccagatcg ggcgaatata caccgacact ggtgcgggag ctgaggtcat attcgaatat
      301 tgttttctgc agctaccaga aaacatcaga cgacaaaaga aggcagcaac ttcgccacta
      361 gcaggattca attgcactgc aacttggccg gtggggtcca taaccctgga ggtggttttg
      421 ggaacattaa cctttcaaag tacagtagac atagaattct ctattgtcaa aacagactca
      481 ctgtataacg tcatcttggg acgtaatgcc atgcagaagt ttggcgcgat tgcctccaca
      541 gtccatggta tgctgaaatt cccgactcca gccggaatcg ctacaatccg gacacaagaa
      601 atggaaccaa ttgaatgcat gcaaatattc aacggatcaa gtgatatctt cgtccatgac
      661 gacggttatg tatccccaaa tcccaagcat ccggaccaac ggatacagat tggtactact
      721 ttgagcacaa atgcaaggga tacgctctgc aaactcctag caccaagtat tgatgtcttc
      781 gcatgggaac catcggacat gacgggtgtc ccacgcgaca tagcccaaca tcggctaaat
      841 gtaaacccga atatcacacc agttatccaa aagaaaaggg aaatggcatt agaacgaagt
      901 gaattcctgg ataacgaagt acaatga
//
LOCUS       XM_071831918             891 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides disease resistance protein
            RPV1-like (LOC139841713), mRNA.
ACCESSION   XM_071831918
VERSION     XM_071831918.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..891
                     /gene="LOC139841713"
                     /note="disease resistance protein RPV1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841713"
     CDS             1..891
                     /gene="LOC139841713"
                     /codon_start=1
                     /product="disease resistance protein RPV1-like"
                     /protein_id="XP_071688019.1"
                     /db_xref="GeneID:139841713"
                     /translation="MGGIGKTSLANYIYQMNHCDFLRSSFIEDIERRCMPKVSSLLDL
                     QKQLLEDIQKGNLQNLNNVNVCTAKIEKALRSNQTFIILDGVDSFEQLYVLIGSKGFH
                     PGSKIIITTKDGCIEPEDGYKEVPMKVVKHCRGHPLALKVLGSSLCNEDVVFWEDTVE
                     LLENEVNPTIQKDKDITETVLKECGVRTISGFRKLINRCLIVVGPRNGLVMHQLVQDI
                     GRYLVYQESPGKPWKRSRIWRQDESYNVLKQEKDTSKIQGLVLDMQMMEKDASHGQGS
                     SSEKIFGDDLFGKFGAHHLI"
     misc_feature    7..>816
                     /gene="LOC139841713"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
ORIGIN      
        1 atgggtggta ttggaaagac atctctggcc aactacatct atcaaatgaa tcactgtgat
       61 tttctaagaa gcagttttat tgaagatata gaaaggagat gtatgccaaa agtaagttca
      121 ttgcttgatc tacaaaagca gttacttgaa gacattcaaa agggtaattt acagaactta
      181 aataatgtta atgtgtgcac cgccaagatc gagaaagcac tgcgaagtaa tcaaacattt
      241 attattcttg atggtgttga tagtttcgag cagttgtatg tgctgattgg ttcaaaagga
      301 tttcatcctg gaagtaaaat tataataaca accaaagatg gatgtattga acccgaggat
      361 ggatacaaag aagtgccaat gaaggttgtg aaacattgca gaggacatcc tttggctctt
      421 aaagttttgg ggagttcctt atgcaatgaa gatgtagtat tttgggagga taccgtagaa
      481 ttgttggaga acgaagttaa tcccaccata caaaaggata aggacatcac tgaaacagta
      541 ctaaaggagt gtggtgttcg gacaataagt ggattcagaa agcttatcaa tagatgctta
      601 attgtggttg gaccgagaaa tgggttggtg atgcaccaac tggtccaaga tattgggaga
      661 tatttagtct atcaagaatc accagggaag ccatggaaac gtagccgaat atggcgtcaa
      721 gatgagtcat acaatgtttt gaaacaagaa aaggatacta gtaaaattca aggccttgtt
      781 cttgacatgc aaatgatgga gaaagatgca tcacatggac aaggtagttc atcagagaaa
      841 atttttggag atgatctttt tggaaaattt ggagcacatc atcttattta g
//
LOCUS       XM_071831919            1110 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841715), mRNA.
ACCESSION   XM_071831919
VERSION     XM_071831919.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139841715"
                     /note="uncharacterized LOC139841715; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841715"
     CDS             1..1110
                     /gene="LOC139841715"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688020.1"
                     /db_xref="GeneID:139841715"
                     /translation="MVIATVGRCKVSRIYVDTGSAVDVLYEHCFLQLPQDVQDRLKPP
                     LYPVAGFTGETTWSLGRVSIDVTLEENKKRRTVALNFVVVRSQSKYNIIMGREALCKF
                     GAIVSTVHGIMKFPTRLGVAIVFSDRVPVVGQVEQPLQPAALIEQGGSVIINHSFHEK
                     TIQIGHTLTDATKSVLCQLLSNNADVFVWQESDMTGVPRTVAEHRLNANPSLTPVRKK
                     KRGMAPERSAFLRSEVEKLVNGSWRMCVDFKDINKAYPKDNYPLPEIDWKVESLAGFR
                     FKCFLDAYKGYHQIQMAERDEDKTAFHTDQGIFCYKKMPFGLKNAGAMYQRVIEAAFK
                     AQIGRNVEAYVDDIVIKSHTETDLLKDIQETFDSL"
     misc_feature    46..288
                     /gene="LOC139841715"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(49..51,55..57,61..63,142..150,277..279)
                     /gene="LOC139841715"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    49..57
                     /gene="LOC139841715"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    49..51
                     /gene="LOC139841715"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(142..153,163..174)
                     /gene="LOC139841715"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    715..1107
                     /gene="LOC139841715"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(844..861,946..951,1030..1032,1036..1041)
                     /gene="LOC139841715"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(844..861,946..948,1036..1038)
                     /gene="LOC139841715"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    949..951
                     /gene="LOC139841715"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
ORIGIN      
        1 atggtaatcg caacggtagg acgatgcaag gtctccagaa tatatgtaga taccggaagt
       61 gccgttgatg tcttgtacga acattgcttc ttacaactac cgcaagacgt gcaggatagg
      121 ttaaaacctc cactttatcc cgtcgctgga ttcacaggag aaactacttg gtctttaggc
      181 cgagtaagta ttgacgttac tttagaggaa aataagaaga gacgaacagt ggctttaaat
      241 ttcgtggtcg ttagaagtca gtcgaagtat aacattatta tgggacggga agcgttatgc
      301 aaattcggcg cgatagtttc cactgtacat ggaataatga aattcccgac ccggttaggc
      361 gtggcaattg ttttttccga ccgggtcccg gttgtaggcc aggtcgaaca gccgctacaa
      421 ccggcagcac tgattgagca agggggaagt gtcatcatca accattcctt tcatgagaaa
      481 acgatacaga ttgggcacac tctcaccgat gcgacgaaaa gtgtgttatg tcaacttttg
      541 tcaaataacg ctgacgtgtt tgtatggcag gagtcggata tgacgggagt acctcgtacc
      601 gtcgccgaac atcgattaaa tgccaaccca agtttgactc cggtacggaa aaagaaaaga
      661 ggcatggctc cggaacgtag cgctttccta aggagtgaag tggaaaagtt ggtgaatggt
      721 tcgtggcgga tgtgtgtcga cttcaaagat atcaataagg cttatcccaa ggacaattat
      781 ccgttaccag agatagactg gaaggtagag tcgctggctg gttttcgctt caaatgtttc
      841 ctggacgctt ataagggtta tcaccagatc caaatggcag aacgcgacga agacaaaacc
      901 gcattccaca cagatcaagg cattttttgt tacaaaaaga tgccctttgg tttgaaaaac
      961 gctggtgcaa tgtaccaacg ggtcatcgaa gctgcgttca aagcacagat cggccgaaac
     1021 gtggaagcgt acgtcgatga tatagtaatc aaaagtcaca ccgaaacgga ccttttgaaa
     1081 gacattcagg aaacgtttga ctcgctatga
//
LOCUS       XM_071831921             456 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841716), mRNA.
ACCESSION   XM_071831921
VERSION     XM_071831921.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..456
                     /gene="LOC139841716"
                     /note="uncharacterized LOC139841716; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841716"
     CDS             1..456
                     /gene="LOC139841716"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688022.1"
                     /db_xref="GeneID:139841716"
                     /translation="MEPRWRSSTDLENLEQDLRSLPLPSNNPDTWTWKHEKNGKYSSS
                     SLAKMSTDARMVNIPLPDPTLLNTLIPQKVGIFMWRVQKNRLPVRIELDNKGIDLHTV
                     LCPFCNNEPESIQHALFSCKTAADIWEKVRLWWRLDKLPFVSYSDLASG"
     misc_feature    121..381
                     /gene="LOC139841716"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaaccta ggtggaggtc ctccactgat ctcgaaaatc tggaacagga tttacgcagt
       61 cttcccctcc cttcaaacaa tccggatacg tggacttgga aacacgagaa gaatggaaaa
      121 tactcttctt catcactcgc gaagatgtca acagatgcta gaatggtaaa tataccgtta
      181 cccgatccaa cgttgctcaa tactttaatc ccacaaaagg taggaatttt tatgtggcgt
      241 gtacagaaaa acaggctccc ggttagaatt gaactagaca ataagggcat tgatctacac
      301 accgttcttt gcccgttctg caacaatgaa cccgaaagta tccaacatgc cctcttctct
      361 tgcaaaacgg ctgctgacat ttgggaaaag gttcgcttgt ggtggcgtct tgataaactc
      421 cctttcgtga gctactctga ccttgcttca gggtaa
//
LOCUS       XM_071831922             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841717), mRNA.
ACCESSION   XM_071831922
VERSION     XM_071831922.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139841717"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139841717"
     CDS             1..567
                     /gene="LOC139841717"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688023.1"
                     /db_xref="GeneID:139841717"
                     /translation="MVDEFKDVMQKRFKMSSLSTISFFLWLQVDQIEKCIFLHQTKYV
                     ADIFSWFKMEDERVAKNPLSVNHGITPEIQGEKFNQTLYQAIIGSLMYLTASRPNIMF
                     ATCLCARYQANPNANLMLAAKKIMIYLKGAPSLGLWYPRKDEFELTTYSDYDYGKCKR
                     DFKSTSGSCQFLDSRLISWQCKKQTAVA"
     misc_feature    <1..165
                     /gene="LOC139841717"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    442..>564
                     /gene="LOC139841717"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggtagatg aatttaaaga tgttatgcag aaaagattca agatgagttc actgagtacc
       61 attagtttct ttttatggct gcaggttgat caaatagaaa aatgcatctt tctacatcaa
      121 acaaagtatg tagctgacat ctttagctgg ttcaagatgg aagatgaacg agttgctaag
      181 aatcctctat cggtgaatca cgggattacg ccagaaattc aaggagagaa attcaaccag
      241 accttatatc aagctataat tggttcctta atgtatctta cagcttcacg ccctaatatc
      301 atgttcgcaa cttgcttgtg tgctcgttat caagcgaatc cgaatgcgaa tcttatgtta
      361 gctgcaaaga agatcatgat atatctcaag ggggctccta gtttgggctt atggtatcca
      421 cgaaaggatg agtttgagtt aacaacttat agtgattatg actatggtaa atgtaaaaga
      481 gatttcaaat ctacctctgg tagttgtcag tttcttgata gcaggttaat aagttggcag
      541 tgtaagaaac aaactgctgt tgcataa
//
LOCUS       XM_071831923            1539 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841718), mRNA.
ACCESSION   XM_071831923
VERSION     XM_071831923.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1539
                     /gene="LOC139841718"
                     /note="uncharacterized LOC139841718; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841718"
     CDS             1..1539
                     /gene="LOC139841718"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688024.1"
                     /db_xref="GeneID:139841718"
                     /translation="MKIMPPRESTEARFQRLLAEGNATATAAMATTLQNNINNHNNDN
                     NGNGNGNHDGCSHKTFMGSKPQDFCGTEGPVGLSRWFEKLESKFRASRVREEDKVNFA
                     SCTLKNSALTWWNNHVSAIGNDVAYGLTWEAFKQRMINRYCPRGELKKLETELKNLKM
                     KGNDIDAYDQRLFEFTLLCPNVFPTEDLKIEAYIEGLSDLIEVGVESSEPQTIEATVD
                     MAHKLNDKILRKAKKISPGETSNEVAKKDENGKRKWEGNRNSNHNQHKRHNNSGSKQG
                     NERYTCPRCYKNHTGYCTVVCSKCNKQGHIAQDCKSSISNTAAKEPINGKDKISAPRV
                     CYGYGKPGHFIDSCPDKKKNGGNTRGRAFNINVRDAEEDPELVTGTFSVNNLLLHVLF
                     DSGADLCFVSSKLSPKIITPLSTLDKKYTVEVASGKLLKAEKVYRNCSITLGDKSFEL
                     GLIPIELGSFDVIISMDWLSKNRAEIVCYEKAIRIPQVDGEPLMIYSDKKCKQLNLIS
                     CLKV"
     misc_feature    298..597
                     /gene="LOC139841718"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
     misc_feature    <853..1053
                     /gene="LOC139841718"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    1072..1449
                     /gene="LOC139841718"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1177..1179,1183..1185,1189..1191,1264..1272,
                     1387..1389)
                     /gene="LOC139841718"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1177..1185
                     /gene="LOC139841718"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1177..1179
                     /gene="LOC139841718"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1264..1275,1285..1296)
                     /gene="LOC139841718"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaagatca tgcctcctcg tgaatctacc gaagctcgtt ttcaacgatt gttggcagaa
       61 gggaacgcta ctgccactgc tgctatggcc acaactcttc agaataatat caataaccac
      121 aataatgaca ataatgggaa tggaaatggg aaccacgatg gctgttctca caagaccttc
      181 atggggagta agcctcaaga tttttgtggt actgaaggac cagttggtct ttcacgttgg
      241 tttgagaagc tagaatcaaa atttcgagct agcagggtcc gagaagagga taaggtgaac
      301 ttcgccagct gtactttgaa aaatagtgca ttgacctggt ggaacaatca tgttagtgct
      361 attgggaatg atgtggcata tggccttact tgggaagctt tcaagcaaag aatgatcaac
      421 cgctactgtc cgaggggtga acttaagaaa ctagagactg agctgaaaaa tctgaaaatg
      481 aagggaaatg acattgatgc ttatgatcag cggttatttg agttcactct tttgtgtcca
      541 aatgtttttc ctaccgaaga cctcaagatc gaggcttata ttgaaggatt atctgacttg
      601 attgaagttg gtgttgaatc cagtgaacct caaactattg aagctaccgt agatatggca
      661 cacaagctaa atgacaagat tttgcgtaag gcaaagaaga tatcgcctgg agaaactagc
      721 aatgaggttg ctaagaaaga tgagaacggg aagcgaaaat gggaaggtaa ccgtaactca
      781 aatcacaatc agcataagag gcataataac tcgggttcta agcagggtaa tgagcgttac
      841 acgtgcccaa gatgctacaa gaaccatact gggtactgta cagttgtgtg ttccaagtgc
      901 aacaaacagg gacacatagc tcaagattgt aagagctcta tttctaatac tgctgcaaag
      961 gaacctatta atgggaagga taaaatttct gcaccgaggg tttgttatgg gtacggaaaa
     1021 ccagggcatt ttatcgattc gtgcccggat aagaagaaaa atggtgggaa cacgcgtggt
     1081 agagcgttca acattaatgt cagagatgcg gaggaggatc ctgagttggt tactggtacg
     1141 ttttcagtca ataatttact acttcatgtt ctatttgatt ctggtgcgga tttatgtttt
     1201 gtgtctagca aactaagtcc taaaatcatc actccattat cgaccttaga caaaaagtat
     1261 actgtagagg tagcaagtgg taaattactt aaggctgaaa aagtgtatcg taactgtagt
     1321 ataactttgg gtgataaaag ttttgaattg ggcttgatac ctattgagtt aggaagtttt
     1381 gatgtaatca ttagtatgga ttggctatct aagaatcgag ctgagattgt ttgctatgag
     1441 aaggctattc gtattcctca agtagatgga gaaccgttaa tgatctatag tgataagaag
     1501 tgcaagcagt tgaatctcat tagctgtttg aaagtttag
//
LOCUS       XM_071831924             705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841719), mRNA.
ACCESSION   XM_071831924
VERSION     XM_071831924.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..705
                     /gene="LOC139841719"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841719"
     CDS             1..705
                     /gene="LOC139841719"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688025.1"
                     /db_xref="GeneID:139841719"
                     /translation="MNSSNPVVVSATNFHSPDHTKFSHSSVCTICEDTTTPDHTIFAA
                     QSPSSPQLNVKNAFLNGHLTEHVLMEQPPGFVDSRYPSNVCKLKTALYGLKQPPRVCQ
                     KKYAHYILTHARLLHIKPIGMPLSTAEVLTSHGPPFVDHTLHRSMAVKRILCYVKGTL
                     SYGLTFKHSPTSSILGDSDADCARCIETRRSTYGYSIFHRGNLVSWSAKKQPTVARSS
                     CESEYQALANTAAEIV"
     misc_feature    <151..>297
                     /gene="LOC139841719"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    532..>702
                     /gene="LOC139841719"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaattctt caaatccagt tgtcgtttcg gctacaaatt ttcattcacc tgatcatact
       61 aaattttctc attcatcagt ttgcaccata tgtgaggata caacgactcc tgatcatact
      121 atttttgctg ctcagtcgcc ttcttcacca cagctaaatg tgaagaatgc gtttctaaat
      181 ggccatctca ctgaacatgt tctcatggaa caaccgcctg gttttgttga ctcgcgatat
      241 ccatcaaatg tttgcaagct gaagacggct ttatatggtc tcaaacagcc accacgggtc
      301 tgccagaaaa agtatgcaca ctacatacta actcatgcca ggttgctgca tattaagcca
      361 attggtatgc ctctttccac agctgaggtt ctcacctccc acggacctcc ttttgttgat
      421 catactctac atcgatccat ggccgtcaaa cgtattcttt gttatgttaa gggcaccttg
      481 tcatatgggt taacctttaa gcattcacct acatcttcta ttcttggtga ttctgacgca
      541 gattgcgctc gttgtattga aactcgccga tccacttatg gctattcaat ttttcataga
      601 ggtaatcttg tgtcttggag tgcaaaaaag caacctaccg tggctcgttc gagttgtgaa
      661 tctgaatatc aagcactcgc aaatactgca gcagaaattg tatag
//
LOCUS       XM_071831925             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841720), mRNA.
ACCESSION   XM_071831925
VERSION     XM_071831925.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139841720"
                     /note="uncharacterized LOC139841720; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841720"
     CDS             1..555
                     /gene="LOC139841720"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688026.1"
                     /db_xref="GeneID:139841720"
                     /translation="MTTDDAKNSNKVVLGTFLVNSKPAKVLLDSGADMTYVSLTYVAT
                     LDCPLYDQDFPLQVEIAVGSRWLMGENLDCHEKFVRVRTPSGGELIVYGEARKHPVHI
                     CTYAQARRLVSSRGIAYLAHVVDTRDEQPPIKSIPVVNEFEDVFPNELPGVPPVRQVE
                     FRIEFSGGESHCQNSLSFGTNRDA"
     misc_feature    1..>192
                     /gene="LOC139841720"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(85..87,91..93,97..99,172..180)
                     /gene="LOC139841720"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..93
                     /gene="LOC139841720"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..87
                     /gene="LOC139841720"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgactaccg atgatgctaa gaattccaac aaggtggttt taggtacttt cttggttaac
       61 tctaaacctg ctaaggttct acttgatagt ggtgccgata tgacttatgt ttccttaaca
      121 tatgtggcca ctttagattg tcccttatat gatcaagact ttccgttgca agttgagatc
      181 gctgtaggtt ctcggtggct aatgggagaa aatcttgatt gtcatgagaa atttgtaagg
      241 gtaagaaccc caagtggggg agagctaatc gtgtatggtg aagctcgaaa acatcccgtg
      301 catatttgta cttatgctca ggcgcgtcga cttgtttcta gtagaggtat agcttatcta
      361 gcccatgtgg ttgatactcg tgatgagcaa cctcccatta aatctattcc tgttgttaat
      421 gaatttgaag atgtctttcc taacgaatta ccaggtgttc cgccggtaag acaagtggag
      481 tttcgcatcg agttttctgg gggcgaatct cattgccaaa actccctatc atttggcacc
      541 aaccgagatg catga
//
LOCUS       XM_071831926             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841721), mRNA.
ACCESSION   XM_071831926
VERSION     XM_071831926.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139841721"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139841721"
     CDS             1..504
                     /gene="LOC139841721"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688027.1"
                     /db_xref="GeneID:139841721"
                     /translation="MSQHLTKNRGVPVAQLEYSRIISSLMYLMSCTRPDIAYVVSRLS
                     RYTSNPSTDHWKSITQLPRYLRFTREYGLHYNRYRAIIEGFSDANWISNIKDSRATSG
                     YVFTLGGAAISWKSCKQTVIARSIMESEFIALDKCGEEAEWLRQFTEDIPEWPKLVLA
                     ICIHCDS"
     misc_feature    247..>501
                     /gene="LOC139841721"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(259..270,373..381,388..390,496..498)
                     /gene="LOC139841721"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgagtcaac atctaactaa gaatagagga gtgcccgtgg ctcagcttga atactcaaga
       61 ataattagca gtctaatgta tctgatgagt tgtactagac ctgacatagc ttatgttgtg
      121 agtaggttaa gtagatatac gagtaatccg agcactgatc attggaagag cataactcag
      181 ctacctaggt acttaagatt cactcgtgaa tatggactgc attataacag atatcgtgcc
      241 ataatcgaag gatttagtga tgctaattgg atttctaata taaaggattc cagagctacc
      301 agtggatatg tttttacatt gggaggtgca gctatatctt ggaagtcttg taaacagaca
      361 gttatagcta ggtccataat ggaatctgaa tttattgcct tagataaatg tggagaagag
      421 gcagagtggc tacgtcagtt caccgaggat ataccagaat ggcctaagct ggtgttggcc
      481 atatgtatac actgtgatag ctaa
//
LOCUS       XM_071831927             558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841722), mRNA.
ACCESSION   XM_071831927
VERSION     XM_071831927.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..558
                     /gene="LOC139841722"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841722"
     CDS             1..558
                     /gene="LOC139841722"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688028.1"
                     /db_xref="GeneID:139841722"
                     /translation="MGVKIAFLKGELDEEVYMKQPEGFVIPGQEIKVCKLIKSLYGLK
                     QAPKHWHKMFDDVVLSLGFTLNQSDKCVYSKFDHKEKCKAVKQIEYSQAIGCLMYGMT
                     LTRLDIAYAVGKLSRFTSNMGTHHLYAINRVFKYLKQTMNYGITYSGFPPLVEGYSDA
                     RWITNAEDHSSTTGWIFLLGGGAIS"
     misc_feature    <1..>243
                     /gene="LOC139841722"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    463..>555
                     /gene="LOC139841722"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgggtgtga aaatagcctt tttaaagggt gaattagatg aagaggtata catgaaacaa
       61 ccggagggat ttgtaatacc gggacaagag ataaaagtgt gtaaattgat taagtctttg
      121 tatggactta aacaagcacc taaacattgg cataaaatgt ttgatgatgt agtattgtct
      181 cttgggttta cattgaatca atcggacaag tgtgtatata gcaaattcga tcataaggaa
      241 aaatgcaagg cggtgaaaca aattgaatac tctcaagcaa taggttgttt gatgtatggt
      301 atgacattaa caagactgga tattgcttat gccgtaggaa aactgagtag atttacaagt
      361 aacatgggta ctcaccattt gtatgcaatt aatcgagtat tcaagtactt gaagcaaacc
      421 atgaattatg gtatcacata ttccggattt cctcctctag tagaaggata ctcggatgca
      481 cgttggatta ccaacgctga agatcattct tctacaacgg gttggatatt cctacttgga
      541 ggaggagcta tttcatga
//
LOCUS       XM_071831928             516 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841723), mRNA.
ACCESSION   XM_071831928
VERSION     XM_071831928.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..516
                     /gene="LOC139841723"
                     /note="uncharacterized LOC139841723; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841723"
     CDS             1..516
                     /gene="LOC139841723"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688029.1"
                     /db_xref="GeneID:139841723"
                     /translation="MADPNFHQAITVTNIQNIILIVLDIEKSQYASWAELFKIHYIAY
                     DAIDHIIPPSITPSTESSASTTTDPPTPDPKWKYLDGIVLQWIYSTISNDLLHMILRT
                     NTTAAKTWERLQNIFQDNKYTCALYLNRQLNNIKFDNFSSASAYCQEIKVLVDQLSNV
                     GDHVSEDRMVL"
     misc_feature    256..>510
                     /gene="LOC139841723"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggccgacc caaattttca tcaagctatc actgtcacca acatccaaaa tattatactc
       61 attgttcttg acattgagaa aagccaatat gcttcatggg cggaactttt taagatccac
      121 tatatcgctt atgacgctat cgaccatatc attccaccat ccatcacccc ttctaccgaa
      181 tcatctgctt ccacaaccac cgacccgcct actcccgatc ctaagtggaa atatcttgat
      241 ggtatagtcc tccagtggat ctatagtaca atctctaatg atctcctcca tatgattttg
      301 aggacaaaca ccactgcggc taagacttgg gaacgactcc aaaatatttt tcaagataac
      361 aaatacactt gtgccttgta tctgaatcgc caattaaaca atatcaaatt tgacaacttc
      421 tcatctgcct ccgcctattg tcaagaaatt aaagttcttg tcgatcaact ctcaaatgtt
      481 ggtgatcatg taagtgaaga tcgcatggtt ctgtag
//
LOCUS       XM_071831929             744 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841724), mRNA.
ACCESSION   XM_071831929
VERSION     XM_071831929.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..744
                     /gene="LOC139841724"
                     /note="uncharacterized LOC139841724; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841724"
     CDS             1..744
                     /gene="LOC139841724"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688030.1"
                     /db_xref="GeneID:139841724"
                     /translation="MKVCDKCEKNGHLAAKCKSGPNVCYGCGKTGHFRKDCPTANKNL
                     EHARGRAFKINSSEARDDLKLVTGTFLLDNHHAHVVFDSGADRSFMSRDFCHNLKNPV
                     SSLENLYSIELGNANLMRADKAYRDCTLILAGTSFRIDVIPIKLGSFDLVVGMDWLAK
                     NRADIVCYQKAMRIPVAEDEPLIVYGGAEKLEVVPIVRDFPDVFPNELPRLPPHRHVE
                     FQIDLMPGAAPVAHVPYRLAPSELQEMSS"
     misc_feature    <10..120
                     /gene="LOC139841724"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    139..510
                     /gene="LOC139841724"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(244..246,250..252,256..258,331..339,454..456)
                     /gene="LOC139841724"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    244..252
                     /gene="LOC139841724"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    244..246
                     /gene="LOC139841724"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(331..342,352..363)
                     /gene="LOC139841724"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaaggtgt gtgataagtg tgagaagaat ggacacttgg ccgcgaagtg taaatctggg
       61 cctaatgttt gttatggatg tgggaaaact ggtcatttca gaaaggattg tccgactgca
      121 aataagaatc ttgaacatgc tagaggaaga gctttcaaaa tcaactccag tgaagctcgt
      181 gatgatctta agttagtcac gggtacgttt ttactcgaca accatcatgc tcatgtagtt
      241 tttgattctg gagctgatag gagttttatg tctagagatt tttgccataa tcttaagaat
      301 cccgtatcat cattagaaaa cttgtactct atagaactag ggaatgctaa tctaatgaga
      361 gctgataagg cttatcgcga ttgtactttg attttggctg gaacgtcttt tagaatagat
      421 gtgataccaa ttaagctggg aagttttgac cttgtggttg gaatggactg gttagctaag
      481 aatagagccg acattgtttg ttaccagaaa gcgatgcgca ttcctgttgc cgaagatgaa
      541 cctttgatag tgtatggagg tgcagaaaaa ctcgaagttg taccgattgt tagagacttt
      601 cccgatgttt ttccgaatga gttacccaga ttgccaccgc atagacatgt agaatttcag
      661 atcgacttaa tgcctggagc ggcacctgta gcgcacgtac catatagact tgcaccttca
      721 gaattgcaag agatgtctag ttag
//
LOCUS       XM_071831930             408 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841725), mRNA.
ACCESSION   XM_071831930
VERSION     XM_071831930.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..408
                     /gene="LOC139841725"
                     /note="uncharacterized LOC139841725; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841725"
     CDS             1..408
                     /gene="LOC139841725"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688031.1"
                     /db_xref="GeneID:139841725"
                     /translation="MKDWEISNNQVLVCPLCGVCSDSLAHLFFECSFSRDVWQKVLLL
                     SAIATHTDWMLISNELATGPINSAYVVVSKLMFAACVYFIWQERNSRIFKKGEMRVYK
                     TFNKANLDNVIVSEREKTAKEVEAEKAKDAEFE"
     misc_feature    <1..111
                     /gene="LOC139841725"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaaggatt gggaaattag taataatcaa gtgcttgtgt gtccattgtg tggcgtttgt
       61 tctgattcgc tagcgcactt attttttgag tgcagcttct ctcgtgatgt ttggcaaaag
      121 gttttgctgc tgtctgctat tgctactcat actgattgga tgctgatttc aaatgagtta
      181 gctacgggcc cgattaatag tgcttatgtt gttgtttcga aactcatgtt tgctgcttgt
      241 gtttacttta tttggcaaga acggaatagc aggattttta aaaaaggaga aatgagggtt
      301 tataaaactt ttaataaagc caaccttgac aacgttattg tgtcagaaag ggaaaaaact
      361 gcaaaagaag ttgaggctga gaaagccaag gatgctgaat ttgagtag
//
LOCUS       XM_071831931            1359 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841726), mRNA.
ACCESSION   XM_071831931
VERSION     XM_071831931.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1359
                     /gene="LOC139841726"
                     /note="uncharacterized LOC139841726; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841726"
     CDS             1..1359
                     /gene="LOC139841726"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688032.1"
                     /db_xref="GeneID:139841726"
                     /translation="MNRILLQAAWNGDVDYLLKEIDTNPSILHVTSLEGGENPLHISC
                     LAGHLNFAATLLKLRPKYSRELNQDGFCSLHIAAASGHIEIVKELLKVDLGLCLVKGK
                     DRRIPLHVAVVNGGNVEVIKELLSASSSSVECVTAQGETSVHLAVHNNQFEAFQVLVE
                     HMKQANKEDLLNVQDLHGNTALHLAVSKKQYEVVDFLLNGPVNKENLEFNSLNKSSLT
                     PLDMLLMFRSESGDREIEEILIQAGALKSENLQTSAYTQEQQQHQTHTSRTESRSPSR
                     KVLEYFKFNNLRDSPRIVRNTLLVIVILITTATYQATLSPPGGVWQDDFNPSTINNSN
                     SNSNNSNTTYVKAHTAGRAVMGTHNPISYSIFLFGNSVGFYTSVYMMYVLTAAFPLRL
                     EFHICLFALCSNYGTCMSAIAPNNAISYAFTGTSIAVPIMIPLVTMLWRDYLRRPRRV
                     SP"
     misc_feature    13..93
                     /gene="LOC139841726"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    52..>732
                     /gene="LOC139841726"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    106..201
                     /gene="LOC139841726"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    205..303
                     /gene="LOC139841726"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    319..408
                     /gene="LOC139841726"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    order(325..330,337..345,352..357,367..369,376..378,
                     406..408,412..414,418..420,430..435,442..450,454..459,
                     469..471,478..480,523..525,529..531,535..537,547..552,
                     559..567,571..576,586..588,616..618)
                     /gene="LOC139841726"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    412..525
                     /gene="LOC139841726"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    529..618
                     /gene="LOC139841726"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    643..732
                     /gene="LOC139841726"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    883..>1203
                     /gene="LOC139841726"
                     /note="Domain of unknown function; Region: PGG; pfam13962"
                     /db_xref="CDD:433609"
ORIGIN      
        1 atgaatcgga tactacttca ggcagcatgg aatggggatg tcgattatct tctcaaagaa
       61 attgacacaa atccatctat acttcacgtt acctcgttag aaggcgggga gaatccgtta
      121 cacatttctt gtttggctgg acatctaaac tttgcagcta cactcctcaa actgaggcca
      181 aaatattcaa gggaactaaa tcaagacggt ttttgttctt tgcacattgc ggctgctagt
      241 gggcatatcg aaattgtgaa ggaacttctg aaagttgacc ttggtttgtg tttggtcaaa
      301 ggaaaagaca gaagaattcc tcttcatgtg gcagtggtca acggtggtaa cgttgaagtt
      361 attaaagagt tgctttcggc aagttcaagt tctgtcgaat gcgtcactgc gcaaggtgag
      421 acatctgttc atttagcagt gcacaataac caattcgaag cttttcaagt tttggttgaa
      481 catatgaagc aggcaaacaa agaagatctt cttaatgttc aggatcttca tggaaatacg
      541 gccttgcacc tagccgtatc caaaaaacag tacgaggtgg ttgacttttt actaaatgga
      601 ccagttaata aggaaaactt agagttcaat tccttaaaca agagtagttt aactcctctc
      661 gatatgctac taatgtttcg tagtgaatcc ggtgatcggg aaatcgagga aattctcatc
      721 caagccgggg cactaaaatc tgaaaaccta caaacttcag catacacaca agaacaacaa
      781 caacatcaaa cacatacatc acgtacggaa tctcgatctc catctagaaa agtgttggaa
      841 tatttcaagt tcaataacct cagagactct cctcgcattg taagaaacac gcttctagtg
      901 atagtcatac ttataacaac tgctacctat caagccacac ttagcccgcc aggtggcgtt
      961 tggcaagacg attttaatcc atctacgata aataatagta acagtaatag taataatagt
     1021 aatactactt atgtaaaagc gcatactgca ggaagagcgg taatgggaac tcacaacccg
     1081 atatcttata gtatatttct ttttggaaat tccgttgggt tctatacctc ggtctacatg
     1141 atgtacgtac tcactgcagc tttccctttg cggttggaat ttcatatttg tctgtttgcg
     1201 ctctgttcga attacggtac ttgcatgagt gcaattgcgc cgaataatgc tatttcatat
     1261 gcttttacgg gcacttcaat cgctgtgccg attatgatac cgcttgtaac catgttgtgg
     1321 agagattatc ttcgacgacc tagaagggtg tcaccttag
//
LOCUS       XM_071831932             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841728), mRNA.
ACCESSION   XM_071831932
VERSION     XM_071831932.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139841728"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841728"
     CDS             1..660
                     /gene="LOC139841728"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688033.1"
                     /db_xref="GeneID:139841728"
                     /translation="MKNKFEMSMLEELQFFLGLEVKQLPTGIFIGQSKYISDMFKKFN
                     FPEMKTSPTPMSINISLHTDLDGQPFDQTLYQNLIGSLMYVTASRPDIMFVVCLCARF
                     QANPRYSHYKAIMRIFSYLKGTVHLGLWYPFGTGFHRMAFMDADHGGDQVNRKITFGG
                     LQFLGRKLVSWSSRKQNCISLSTAESEYIAAASCYSQVLWMQTQLLDYGFKFHKNPHL
                     L"
     misc_feature    <1..165
                     /gene="LOC139841728"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    418..>657
                     /gene="LOC139841728"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaaaaca agtttgaaat gagtatgctc gaagaacttc aattctttct gggattagaa
       61 gttaaacaac ttccaactgg gattttcatc ggacaatcta agtacatctc cgatatgttc
      121 aaaaagttta actttcctga gatgaaaact agccctaccc caatgtcaat caacatctca
      181 ttacatactg atctggacgg acaacctttt gatcaaacgc tctatcaaaa cttaataggc
      241 tcattgatgt acgttactgc cagtagaccc gacatcatgt ttgttgtatg tctgtgtgcc
      301 cgatttcaag ccaaccctag gtactctcac tataaggcca taatgagaat atttagctac
      361 ctcaagggca ctgttcacct tggactctgg taccccttcg ggactggatt ccaccgtatg
      421 gccttcatgg atgctgatca tggtggtgac caagtgaacc gaaaaattac cttcggtggc
      481 cttcaattcc taggtcgtaa attagtcagc tggtcatctc gcaagcaaaa ctgcatatca
      541 ctctccactg ctgagtctga atacattgca gctgcaagtt gttactccca agtgttgtgg
      601 atgcagaccc aacttctcga ctatggattt aagttccaca aaaatcccca tctactgtga
//
LOCUS       XM_071831933            5263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides brefeldin A-inhibited
            guanine nucleotide-exchange protein 5-like (LOC139841729), mRNA.
ACCESSION   XM_071831933
VERSION     XM_071831933.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5263
                     /gene="LOC139841729"
                     /note="brefeldin A-inhibited guanine nucleotide-exchange
                     protein 5-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139841729"
     CDS             1..5034
                     /gene="LOC139841729"
                     /codon_start=1
                     /product="brefeldin A-inhibited guanine
                     nucleotide-exchange protein 5-like"
                     /protein_id="XP_071688034.1"
                     /db_xref="GeneID:139841729"
                     /translation="MELCHSDVWTEKIEVYSDANESSESITKTLASAGQTLEGVELEL
                     VLNPLRLAFETKNPKFIELALDCIHKLIAYDHLEGDPGIENGQNVPLFTNMLNTICGC
                     VDNNSPDSTILQVLKVLLTAVSSTKFRVHGEPLLGVIRVCYNIALNSKSPVNQATSKA
                     MLTQMISIVFRRMDTNSVSSDGQPVNETSESSMIIEETLPSDKDDQMLTSTANNTSIA
                     PLEELQNLAGGNDIKGLEAVLDKALQLEDDQKTSGVNSKSMSIADRDAVLVFRTLCKM
                     AMKEDNDAVTSKTRILSLELLQALLEGVSHSFTKNFTFIDAVKAYLSYALLRACVSKS
                     STIFQYATGIFAVLLLRYREGLKIEIGIFFPLIVLRSLDSSEISVNLKLMVIRMLEKI
                     CKDPQMLIDLYVNYDCDLEAHNSFERMVTTLSKIAQGTHSLDPTSVNSTQNGTLKGSS
                     LQCLVNVLKSLVDWEKLCREEKHNKDNQFIHEDGLDSDSEANNNNGSANSFEKLKAQK
                     STMEAAISEFNRHPERGIGFLTANRLVDNTPASVAQFLRNTSTLDKAMIGDYLGQHEE
                     FPLAVMHAYVDSMKFYDMKFHTAIREFLKGFRLPGEAQKIDRIMEKFAERYCADNPGL
                     FKSADTAYVLAYAVIMLNTDAHNPMVWPKMSKSDFVRMNATSDPEECIPKLLLEEIYD
                     SIVKEEIKMKGDDNVKTSRKKRETEERGGIVGILNLALPKLRIQSDTKAESEAIIKQT
                     QEIFQKQGAKTSTFYTSQRIDIVRPMIEAVGWPLLATFSVMMEEKENKERVVLCMEGF
                     KAGIYITHVLRMDTMRYAFLTSLVRFTMLHAPKDMLSKNVEALRTLLNLCDSEPNTLQ
                     DTWNAVLECVSRLEYITSTPPMAAAIMHGANQNARESVIQSLKELVGKPCNQVFSNSV
                     KLPSESVVEFFTALCNISAEELKQIPARVYSLQKLVEISYLNMARIRMVWARIWSVLA
                     NHFTTAGSHSNEKIAMYAIDSLRQLGIKYLERAELASLTFQNDILKPFVILMRNGRSE
                     SIRKLIVDCIIQMTRSKVGSIKSGWRSVFMVFTAAANDHLESIVENAFENVEQVVLEH
                     FDQVVGDCFMDCVSCLISFANSKSSHRISLKAIALLRICEDRLAEGLIPGGRLKPINA
                     NADTSFDVTEHYWFPMLAGLSDLTSDPRAEVSKCALEVLFDLLNERGSHFTPRFWEII
                     FHQVLFPIFDHVRQAGKETTPSTNGWLRETSVHSLQLLCDLFNSFYKEVYFMLSPLLN
                     LLIDCAKKTDQTVVSISIGALVHLIEIGGNQFIVSDWDTLLKSIRDASYTTQPLELLN
                     ALSYDNSEIQSFMGGDLQVQEDNSPSATSTADQNLLMVSKDKQEDDSLTDPQESEVQT
                     PLSENAGQTLFPENAEKSSKGPSLQRSQTIGQRLMGNMRDNVLVRSFTAKPKNLTLDP
                     IIPPSSTSKSTDEEPESEDAVESPYMGTIRSKCITQLLLLGALDIIQKKYWSKLKGHQ
                     KITILEILFSMLEFAASFNSYANLRIRMQHVPPERPPINLLRQEFTGACIYLEALHKT
                     TTSVSNPNQNGTSDLLDYDDEDDHKVKTDAEEKLASFCGQVLKEASDFQTDIGESSNM
                     EIHQVLELRSPIVVKVLKGMCSMDNHIFRKHLRSFYPLITKLVCCDQMDVRCALADLF
                     SMQLQGLLH"
     misc_feature    49..5007
                     /gene="LOC139841729"
                     /note="ARF guanine nucleotide exchange factor (ARF-GEF);
                     Provisional; Region: PLN03076"
                     /db_xref="CDD:215560"
ORIGIN      
        1 atggagcttt gtcacagtga tgtctggact gaaaaaatcg aagtttactc agatgcaaac
       61 gaatccagtg aaagtattac aaagacatta gcaagtgctg gccagacttt ggaaggagtt
      121 gagttggaac tcgttcttaa tccacttcga cttgcatttg aaaccaagaa tccaaaattc
      181 attgaactcg cattggattg tattcataaa cttattgcat atgatcacct agagggcgat
      241 ccgggtattg aaaacggtca aaacgttcca ctatttacaa acatgctgaa cacgatttgc
      301 ggttgtgttg ataataactc acctgacagt acaattcttc aagtcttaaa agtgctactt
      361 actgctgtat catccacaaa gttcagagtt catggggaac cgttgcttgg tgtaattaga
      421 gtgtgctata atattgctct caacagtaaa agtcctgtca accaagctac atccaaggct
      481 atgttaacac aaatgatcag catagtattc aggcgaatgg acaccaactc ggtgtcctca
      541 gatggtcaac ctgtaaacga aactagtgaa tcatccatga taatcgaaga aactttacca
      601 tccgacaaag atgatcaaat gttgacttcc accgccaaca acacctctat tgcacctctt
      661 gaagaacttc aaaatcttgc tggtgggaat gatataaagg gtttggaggc agttcttgac
      721 aaggctttgc agcttgagga tgatcaaaag actagcggag ttaattccaa gagcatgagc
      781 attgcagacc gtgatgctgt gcttgttttc cgcacccttt gcaagatggc aatgaaagaa
      841 gataatgatg cagttacctc aaagacacga atactatctc ttgaacttct acaggcctta
      901 ttagaagggg ttagtcactc gtttactaag aatttcactt ttattgacgc ggtaaaagca
      961 tacctatcat atgcactgtt gagggcatgc gtttcaaaat cctcaacgat ctttcagtat
     1021 gcaactggaa tatttgcggt gcttttgtta agatataggg aaggcctaaa gattgaaatt
     1081 ggtatattct ttcctctgat tgttttacga tctttagaca gctcagaaat ttctgtgaac
     1141 ctcaaattaa tggtgattcg gatgttggag aaaatttgca aagaccctca gatgcttatt
     1201 gatttatatg tgaactatga ttgtgatctc gaggctcaca attcgtttga acgaatggtt
     1261 acaacacttt ccaaaatagc tcaaggaaca cacagtttgg atcctacatc tgttaactcg
     1321 acccaaaatg gaacgcttaa aggatcatca cttcagtgtc ttgtgaatgt gctaaagtca
     1381 cttgtcgact gggaaaagtt atgtagagag gaaaagcata ataaagacaa ccagtttatt
     1441 cacgaggatg gtttagattc ggactcagaa gcaaacaaca ataatggctc agcgaatagc
     1501 tttgaaaaat taaaggctca aaagtcaacc atggaagcag ccatctctga gttcaaccgc
     1561 catcctgaac gtggtattgg atttctcacg gcaaataggt tggtagacaa tacgcctgca
     1621 tcagtagcac aatttctcag aaatacatcc actttggaca aggctatgat tggtgattac
     1681 ctgggtcaac atgaggagtt tccccttgcc gtaatgcatg cttatgttga ttcgatgaaa
     1741 ttttatgaca tgaaatttca tactgccatt cgtgaatttc tcaaaggttt taggcttcca
     1801 ggggaagcac agaaaataga ccgaataatg gaaaaatttg cagagcgtta ctgtgcagat
     1861 aatccaggtc tgtttaaaag tgcagacact gcttatgttc ttgcatatgc agttataatg
     1921 ttaaacactg atgctcataa tccaatggtg tggcctaaaa tgtcaaaatc tgattttgta
     1981 cgaatgaatg cgacaagtga tccagaagaa tgcataccaa aactactttt ggaagaaata
     2041 tatgactcca ttgttaaaga agagatcaaa atgaagggtg atgataatgt aaaaacgagt
     2101 aggaaaaaac gagaaactga agaacgaggt ggcattgttg gtattttaaa tctagcttta
     2161 ccgaaactta gaattcagtc ggatacaaag gctgaaagtg aggctattat taaacaaaca
     2221 caggaaatat ttcagaaaca aggggcgaaa actagcacgt tttatacgtc acaacgtatt
     2281 gatattgtaa gaccgatgat tgaagctgta ggttggcctt tgcttgctac gttttctgtt
     2341 atgatggagg aaaaggaaaa taaggaacga gtggttctct gtatggaagg ttttaaagca
     2401 gggatttata ttacacatgt cctaagaatg gataccatgc gatatgcttt tttgacatcg
     2461 ttggtcagat tcacaatgtt acatgcacca aaagatatgc ttagtaaaaa cgttgaggcc
     2521 ttacggactc tgctgaatct atgtgactct gaaccaaaca cgcttcaaga tacatggaat
     2581 gctgttttag agtgcgtatc tcgactagaa tatattacat ctactcctcc tatggccgct
     2641 gctataatgc atggagctaa ccaaaatgct agggaatcgg ttattcaatc tcttaaagag
     2701 ttggtcggga aaccgtgtaa ccaggttttt tcaaacagtg ttaaacttcc gagtgaatca
     2761 gtggtggaat tttttactgc tttatgtaac atatcggctg aagaattaaa gcaaatacca
     2821 gctcgtgttt atagcttgca aaaacttgtg gagattagtt accttaatat ggcacgtata
     2881 cgcatggtat gggctagaat atggtccgtc cttgctaatc atttcacaac tgctggaagc
     2941 cattctaacg agaagattgc gatgtatgcc atagattctt taagacaact cggcattaaa
     3001 tacttggagc gggccgaact tgctagtttg acttttcaaa atgatatctt gaaaccattt
     3061 gttattctaa tgcgaaatgg acgaagtgaa tccattcgga aattaattgt tgattgtatc
     3121 attcagatga caagatcaaa agttggaagc attaaatctg gttggcgaag cgtctttatg
     3181 gtttttacag ctgctgctaa tgatcatttg gaatcgattg ttgaaaatgc ttttgagaat
     3241 gtagaacaag ttgtactaga gcactttgat caagtcgttg gcgactgttt tatggactgt
     3301 gtcagttgcc taataagttt tgccaacagt aaaagttctc accggattag tttaaaagcc
     3361 attgcactcc ttcgcatatg tgaggatcga cttgcagagg gactcatacc cggtggtagg
     3421 ttaaaaccca ttaacgcgaa tgcagataca tcgtttgatg ttactgagca ttattggttc
     3481 ccgatgctgg ctggtttgtc tgaccttacg tcagatccac gagctgaggt cagcaagtgt
     3541 gcacttgagg ttttgtttga tttattgaac gaaagaggaa gtcatttcac tccaagattt
     3601 tgggaaatta tattccacca agttttgttt cctatttttg atcacgtgag gcaagcagga
     3661 aaagaaacta caccttctac caatggctgg cttcgtgaaa ctagcgttca ttcgctacaa
     3721 cttttatgcg acctttttaa ctcgttttac aaggaggtgt acttcatgct gtctccattg
     3781 ctaaacttac taatagattg tgccaaaaag acagaccaaa cggtggtttc aatatcaatt
     3841 ggtgcgctcg ttcatcttat agaaattgga ggaaaccaat tcatagtttc tgactgggac
     3901 accttgttaa agagcataag ggatgcttct tacaccactc aacccctcga gctactcaat
     3961 gctttgagct acgataactc agagattcag tcatttatgg gtggagactt acaagttcaa
     4021 gaagataata gtccctcagc tacgtctact gctgatcaaa atctattgat ggtctcgaaa
     4081 gacaaacaag aagatgactc attaacagat ccacaggaat cggaagttca aactccatta
     4141 tcagaaaatg ctggtcaaac tctttttcca gaaaatgcag agaaatcttc caaaggacca
     4201 agtttgcaac ggagtcaaac aataggtcaa agactcatgg gaaacatgag ggataacgtt
     4261 ctcgttagaa gttttacggc taaacctaaa aaccttactt tagatcccat tataccacca
     4321 tcttccacat ctaagtctac tgacgaggag cctgaatccg aagatgcagt agaaagtcca
     4381 tacatgggta caataaggag caaatgtatt actcaattgc tactattagg agcccttgat
     4441 attatccaga aaaaatattg gagcaagttg aaggggcatc aaaagatcac cattcttgaa
     4501 attttgttct ccatgttaga gtttgcagca tcctttaact cgtatgctaa tctcagaata
     4561 cggatgcaac atgtgcctcc tgaaaggcca ccaattaatc ttcttcgtca ggaatttact
     4621 ggagcttgca tttacttaga agcattacac aagacaacaa cttctgtaag taatccgaac
     4681 caaaacggaa caagtgattt acttgattat gatgatgaag atgatcacaa agttaaaacg
     4741 gatgctgaag aaaagcttgc atctttttgt ggccaagtac taaaagaggc atccgatttt
     4801 caaacggata tcggagaaag tagtaatatg gagattcatc aagttcttga acttcgttcc
     4861 cccattgtcg tcaaggtgct gaagggtatg tgctcaatgg acaaccacat attcagaaaa
     4921 catctcagaa gtttctaccc tttgataacc aagctcgtat gctgcgatca gatggatgtt
     4981 cgttgtgctc tagctgatct tttcagcatg cagttacagg gattgctgca ttaattagga
     5041 atacttattt gaacactttt attatctagt ctttcagcac atattatata acacatagtt
     5101 tatgagctct cagaagtgaa gacataccat ctatttgagc attgtgagtc atttttaaaa
     5161 cggctgaatt ttatttttta cttattatgt attcgacaag cacatagaat ttgtattcat
     5221 gaaaaaactt cagtagagtt gagttttggt taatgaggat agg
//
LOCUS       XM_071831935            3399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841730), mRNA.
ACCESSION   XM_071831935
VERSION     XM_071831935.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3399
                     /gene="LOC139841730"
                     /note="uncharacterized LOC139841730; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139841730"
     CDS             1..3399
                     /gene="LOC139841730"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688036.1"
                     /db_xref="GeneID:139841730"
                     /translation="MALQYPLLFPYGEKGYHEEIPYRNNNERRKTIRGFVTMREFYCY
                     MIQQRENEGTTLLRGGRLFQQYLVDAFTAIEEQRLKWLRNHQNELRLDLYNNVCDAVT
                     RGDTKATSIGKRIILPSSHTGSPRYMVQNYQDAMALCQEFDNPELFITFTSNPKWPEI
                     DAMLSYIEGQRAPDRPDIIARVFKQKLDCIMTDIMKKHIFGTTEAGIHIIEFQKRGLP
                     HVHMLIWLTRDCKCKSPSDIDDLISAEIPSKTDDPEGYKAVSEYMLHGPCGGNNMDAP
                     CIIKRKCSKHFPKPYYAETTIDEDGYANYRRRKNGETVTKAKTTLDNSFVVPYNRYLL
                     LKYNAHINVEWCNRSRAIKYLFKYLNKGPDRATIVIQENLTQIENSSVAKIVEVDEIK
                     NYLDCRYLSPCEAVWRMFSFDIHFSQPSVIKLSYHLPNQQAITVHDSANLPALLHRES
                     IKETMFTQWFELNKRDENARQFTYAKIPIHYVWNQDAKEWTPRKQRIVYSNPASGERY
                     YLRMLLNIVKGPQSFEDIRSVNGILHPTFKDACFAYGLINDDKEWTEAIDEATLWASG
                     SQLRDFFVTILLFCNVSKPLKLWEQHWEALSDDILRKRRKLYNYPDLILTETQIKNYC
                     LVEIEAILNKNGKSLADYPDLPQPDQSLLTHKDNRLIREELNYNLQEMRTLHTTLHNS
                     LTPEQLAIYEKVIAAVTQKKGGLFFLYGPGGTGKTFVYNTILTKLRSEKMIVLAVASS
                     RIASLLLPGGRTAHSRFVIPLELMENSTSGAQDETNRTRLFGRMPILLGGDFRQILPV
                     IPKGKRQEVVHACINRSNLWNHCQLHTLTRIMRVNEYAPDGAIDTRKRLFNKWVLDIG
                     DGNVPASTRDGEDEATWIKIPDEYIVESDTSPIDTIVDTIFPDFIANHQDEDYLRERA
                     ILTPRNDDADQINKRMFKKLQSKSMTYQSSDEICKGSTDALEQHQAYPVEFLNKLNFP
                     GVPPHKLKLKIGQPIMLLRNLYPSAGMCNGTRLIITDFQKFVIHARIITGSHIGNTVI
                     IPRIVLTATQSKWPFVLQRIQFPVKPCYAMTINKSQGQSLELVGLYLPKPVFSHGQLY
                     VAMSRVTHPDGLKIVMVNELYDGLQNHTRNVVYKETFTNLHPTT"
     misc_feature    124..672
                     /gene="LOC139841730"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    2047..3030
                     /gene="LOC139841730"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    2134..2154
                     /gene="LOC139841730"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
     misc_feature    <3172..3288
                     /gene="LOC139841730"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    3199..3201
                     /gene="LOC139841730"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggcattac aatacccttt attatttccc tatggggaaa aagggtatca cgaagaaatc
       61 ccgtaccgta ataataacga aagacggaaa actattagag ggtttgtcac catgcgtgag
      121 ttctattgtt atatgattca acaacgtgaa aatgagggca ccaccttgct aagaggtgga
      181 cgattatttc agcaatattt agtcgacgcg ttcacagcca tcgaagaaca acggcttaaa
      241 tggctaagga atcatcaaaa cgagttacgc cttgatctat acaataacgt ttgtgatgct
      301 gtgacacgag gagacacgaa agccacctca ataggaaaac gtatcatcct cccatcttca
      361 cacacaggga gcccgcggta tatggtccag aactaccaag atgcgatggc tctttgccaa
      421 gaatttgata accccgaatt attcattacc ttcacctcca accctaaatg gccagaaatc
      481 gacgccatgc tatcctatat agaaggtcaa cgcgcaccag atcgacccga cattattgca
      541 cgcgtcttca aacaaaagct tgattgcata atgactgaca taatgaagaa acacattttt
      601 ggcacaacgg aagcaggtat acatataatc gagtttcaaa aacgcgggct tcctcatgta
      661 catatgctga tttggttaac tcgcgactgc aaatgcaaga gtccatcaga catcgatgac
      721 ctcatatccg ctgagatccc atctaagact gacgacccag aagggtacaa agccgttagt
      781 gaatacatgt tacatggacc atgtggtgga aacaacatgg atgcaccctg tattattaaa
      841 agaaaatgtt caaaacattt ccctaaaccg tattacgcag agacaacaat agatgaggat
      901 ggatacgcaa actaccgccg aaggaaaaat ggcgaaacgg ttactaaagc caaaactaca
      961 cttgacaaca gctttgttgt cccttacaac agatacctcc tactaaaata caacgcacac
     1021 ataaatgtag aatggtgcaa tagatctcgg gctatcaagt atttatttaa atacttaaac
     1081 aaaggccctg atcgagcaac aattgttata caggaaaatt taactcagat agaaaactcc
     1141 tcagtagcaa agattgttga agtagacgaa ataaaaaatt atttggattg tcgttacctg
     1201 tctccatgtg aggctgtttg gagaatgttt tcgttcgaca tccacttttc tcagccatcc
     1261 gtgataaagc tgtcatatca tttaccaaat caacaagcta ttaccgtaca tgattcagct
     1321 aacctccccg cgcttctaca tagagaaagc ataaaggaga caatgttcac tcaatggttt
     1381 gaactgaaca agcgagacga gaatgcccga cagtttacat acgctaaaat ccctattcac
     1441 tatgtatgga accaggacgc aaaagagtgg acccctcgaa aacaacggat tgtgtactca
     1501 aaccctgcat cgggcgagcg ttattatctc cgtatgttgt taaatatagt gaaaggtccc
     1561 caatcatttg aagatatccg ttcagtcaat ggcatattac atcccacgtt caaagatgct
     1621 tgctttgcat acggtctcat aaatgatgat aaggagtgga cggaagcgat agacgaggca
     1681 acattatggg cttctggttc acagcttcgc gattttttcg tcacaatttt gcttttttgc
     1741 aacgtcagta aacctctcaa actttgggaa caacattggg aggccttatc tgatgacatt
     1801 cttcgcaaga ggcgaaaact gtacaactac ccggacttaa tcctgactga gactcagatt
     1861 aaaaactatt gcttggtcga aatagaagct attttgaata aaaatggtaa aagtctagcg
     1921 gattacccgg atttgcccca acctgaccaa tctctactaa cgcataagga caatcgacta
     1981 attcgagagg aattaaacta caacctgcag gaaatgagaa ccctacacac cacacttcac
     2041 aactctctca ccccagaaca actagccatt tatgagaagg ttattgcagc agtcacacaa
     2101 aagaagggcg ggcttttttt cctatatggc cctggtggta caggaaaaac gtttgtgtac
     2161 aacaccatat tgaccaagct gagatcagaa aagatgatcg tccttgcggt agcatcatca
     2221 agaatcgcat cgttgctttt accaggaggc aggactgctc acagtagatt tgtcatccca
     2281 ttagaactca tggagaatag cacttccggc gctcaagatg aaacaaacag aaccaggctc
     2341 tttggcagga tgccgattct attgggaggt gattttagac agatcttacc ggtcatcccc
     2401 aagggcaaaa gacaagaggt ggtgcatgcg tgcattaacc gttctaacct gtggaatcat
     2461 tgtcagctac atacactaac acgaattatg cgggtcaacg aatacgctcc cgacggtgcc
     2521 attgatacaa gaaaaaggtt attcaataag tgggtgctcg atattggaga tggcaacgtc
     2581 ccagcgtcta cccgagacgg ggaagatgag gctacatgga taaaaattcc cgacgaatat
     2641 attgttgaat cagatacctc cccaattgac actattgtgg acaccatatt cccagatttc
     2701 atagcaaacc atcaagatga agactactta cgcgaaaggg caattttaac tccacgaaac
     2761 gacgatgcag accagattaa taaacgcatg ttcaagaaac tacaatctaa aagtatgaca
     2821 taccaaagct cagatgaaat atgcaaggga tcaacagatg cactggagca acaccaagca
     2881 tatccggtcg agtttttaaa taaattgaat ttccccggcg tcccaccgca caagctaaaa
     2941 ctgaagatcg gtcaacctat aatgttgtta cggaatttgt accccagcgc aggcatgtgt
     3001 aacggaaccc ggcttataat taccgacttt cagaaattcg tgattcatgc ccgcataatt
     3061 actggctcgc atatagggaa tacggtcata atacctagaa tagtcttaac cgctacacag
     3121 tccaaatggc catttgttct gcagcgcatc cagtttcccg ttaaaccatg ctatgcgatg
     3181 acgattaaca agagccaggg acaatcccta gaattagtgg gcctatactt accaaaaccg
     3241 gtcttcagcc atgggcagct atacgtggca atgtcacgag tcactcaccc cgatggcctg
     3301 aaaatagtga tggtcaatga actatacgac gggttacaga accatacacg aaatgtcgtc
     3361 tacaaggaaa cattcacaaa cctacatcct actacttaa
//
LOCUS       XM_071831936             612 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841731), mRNA.
ACCESSION   XM_071831936
VERSION     XM_071831936.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..612
                     /gene="LOC139841731"
                     /note="uncharacterized LOC139841731; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841731"
     CDS             1..612
                     /gene="LOC139841731"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688037.1"
                     /db_xref="GeneID:139841731"
                     /translation="MGIKHLRAYVDSKIVVQQVNGAFEAKDVSMKRYLQLDETLLNDV
                     TEARWIKVSAQLYVLENDVLYRKSYHGLNLRCLAPQQALDVVKEMHEVLCAHHSGYRT
                     IVARIMRYGLANEIVSDNGKQFAENPFKSWCEELSIKQTFTSVAHPQANDQVDVTNKG
                     SVAGIKARLGLSQTKWVDKVPYVLWAHRTTPKWNTDDEMSHSY"
     misc_feature    <1..>105
                     /gene="LOC139841731"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    <325..462
                     /gene="LOC139841731"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atggggataa agcatttacg tgcttatgtg gactctaaga ttgttgtaca acaagtcaac
       61 ggggcatttg aggcaaaaga tgtatcaatg aagcgatatc tgcaattgga cgaaacactg
      121 ctaaatgacg tcacagaagc aagatggata aaggtaagtg ctcagctcta tgtgttggag
      181 aacgatgtgc tctacagaaa atcttaccat ggtctaaatt tgagatgttt ggcaccacaa
      241 caagctttgg atgtggtgaa agagatgcat gaagttttgt gtgcacatca ttctggttat
      301 agaaccattg ttgcacggat catgaggtat ggtttggcaa acgaaattgt aagcgataat
      361 ggtaagcagt ttgcagagaa tccgttcaaa agttggtgtg aagagttaag cattaaacaa
      421 acattcacct ctgtcgctca cccacaagca aacgaccaag ttgacgtaac aaacaaagga
      481 tctgtagctg gcataaaggc tagactggga ttaagtcaga ctaaatgggt agataaagta
      541 ccatatgttt tgtgggctca tcgtacaacg ccaaaatgga acacggatga tgaaatgtcc
      601 cattcttatt ga
//
LOCUS       XM_071831937             450 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841732), mRNA.
ACCESSION   XM_071831937
VERSION     XM_071831937.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..450
                     /gene="LOC139841732"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 Proteins"
                     /db_xref="GeneID:139841732"
     CDS             1..450
                     /gene="LOC139841732"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688038.1"
                     /db_xref="GeneID:139841732"
                     /translation="MATPMATNMKLTFEGEGEPFDSTKYRGMIGSLLYLTTGRPDIMF
                     SVCVCARFQENPKTSHVEAVKRIFRYLKGTMHLGLWYPKFTGVDIMCFTDFDHGGSMI
                     DRKSTSEVCTFMGLCLTSWFSKKKTFVALSTTEAEYVVMGRACVQVL"
     misc_feature    268..>447
                     /gene="LOC139841732"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggcgactc ccatggcaac aaatatgaaa cttacttttg aaggagaagg agaaccgttt
       61 gatagtacta aatatagggg aatgattgga tcccttctat atttaacgac aggtcggccc
      121 gacatcatgt ttagtgtgtg cgtgtgtgca agatttcaag aaaatccaaa gacatcgcac
      181 gtagaggccg ttaaaaggat ctttagatac ttaaagggga caatgcatct tgggttatgg
      241 tatccaaagt tcaccggggt tgatattatg tgctttacgg atttcgatca cggaggatca
      301 atgattgata gaaaaagcac aagtgaagta tgcacgttca tggggctttg cttaacatca
      361 tggttctcga agaagaaaac attcgttgca ttgtctacca cggaagccga atatgtggtt
      421 atgggaagag catgcgtaca agtgttgtaa
//
LOCUS       XM_071831938            1632 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841733), mRNA.
ACCESSION   XM_071831938
VERSION     XM_071831938.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1632
                     /gene="LOC139841733"
                     /note="uncharacterized LOC139841733; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841733"
     CDS             1..1632
                     /gene="LOC139841733"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688039.1"
                     /db_xref="GeneID:139841733"
                     /translation="MSPKTAGSMRWHEESRMKDGRLRHPAYSLAWKTFDYENSEFSKE
                     PRNVRLGLASDGFNPFGNMSVSHSTWPVVLMPYNLPPWLCMKKPVLFLSLLIPGPSAP
                     VNTYHASTKSYFTLRASLLWTVSDLPAYANLSGWSTKGKLPCPSSHKESRSTRLSNSH
                     KEIFMAHHRWLESLHPFRMDKDSFDGAEECEGPPRSLTGEQVLAELKGFEIKFGKLVK
                     DNPSLPYNWKKINGKTKDHLKGRRDLEEMGIRHEIHPEPLSIGKVFLSPACFEMDKKE
                     KEKFCNVLKEVKVPDGYAANISRCIQDFSPSFFDVMMHLSVHLASEARLGGPVHYRWM
                     YPNEREHLNILSHQNPNKRKRDIQHLHSQEFEEWLSDYRENSRVILQALTSSFSSARD
                     NDPIVGDVTYYGVLKDIIELQYGDEKKVVLFHCDWISSGSKIKVDENGFTTLDFRGLK
                     QTKEPYILALQAQEVFYVADPVRKDWKVVIKTTPRDNFDIDEQICIDDVETHLQSDTP
                     MGPQLVENETINMVRGDLDGAIIGNDTLVAATDKN"
     misc_feature    55..621
                     /gene="LOC139841733"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    <910..>1020
                     /gene="LOC139841733"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    1228..1437
                     /gene="LOC139841733"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgtcgccta aaactgccgg gtcgatgaga tggcatgaag agagtcgtat gaaagatggt
       61 agattaagac atcccgcata ttcactagcc tggaaaacat tcgattatga gaatagtgaa
      121 ttttctaaag aacctcgtaa tgtgaggctt ggtttggcga gtgatgggtt taaccctttt
      181 ggaaacatga gtgtttcaca tagtacatgg cctgttgttt tgatgccata taatctacct
      241 ccatggttgt gcatgaaaaa acctgttctg ttcctaagtt tacttatacc cggtccatct
      301 gctccagtta atacttatca cgcatcaact aagagttact tcacactgcg tgcttctttg
      361 ttatggacgg taagtgacct tcctgcgtat gcaaatttat cgggctggag cactaaaggt
      421 aaattacctt gtccttcaag ccataaggaa tccagatcaa cacggttatc aaactcccac
      481 aaagaaatct tcatggcaca tcatcgctgg ttggaatcgt tgcatccttt ccgtatggat
      541 aaagattctt ttgatggcgc ggaagaatgt gaagggccgc cgcgtagctt aacaggggaa
      601 caagtgcttg cggagctgaa aggttttgaa ataaaatttg gaaaacttgt gaaggataac
      661 ccatccttac catataattg gaagaagata aatggaaaga ccaaggatca tttaaaagga
      721 cgtcgtgatt tggaagaaat gggtattaga catgaaattc atccagaacc tttatcaatt
      781 ggcaaagtgt ttttgtctcc tgcatgtttc gaaatggata aaaaagaaaa agaaaaattt
      841 tgtaatgtgc taaaagaggt gaaagtgcca gatggttatg ctgctaatat ttctagatgc
      901 attcaggatt tttcaccatc attttttgac gtcatgatgc atctatcggt tcatctagct
      961 tcagaggcca gattaggggg acctgttcat taccgttgga tgtatccaaa cgagagagag
     1021 catctgaata ttcttagtca tcaaaatccg aataaacgta agcgtgacat tcaacattta
     1081 catagtcagg agtttgagga gtggctgtct gattacagag aaaatagcag agtcatactt
     1141 caggctctaa caagtagctt ctcgagtgct agagataacg atcctattgt gggagatgtc
     1201 acttactacg gtgttttaaa agatataatc gagttgcagt atggtgatga gaagaaagtt
     1261 gttttattcc attgtgattg gatatcaagt ggttccaaga taaaagttga tgagaatggg
     1321 tttacgacac tcgattttcg aggtctgaag caaactaaag agccttatat cctagctttg
     1381 caagcacaag aagtattcta tgttgcagat cctgttcgta aagattggaa agttgtgatc
     1441 aagacaacac ctagagataa ttttgacata gatgaacaaa tttgtatcga tgatgtagaa
     1501 acacatttgc agagtgacac accgatgggt cctcaacttg tagaaaatga gactattaat
     1561 atggttagag gcgatttgga tggggccatt attggcaatg atactttagt tgctgctaca
     1621 gataaaaatt aa
//
LOCUS       XM_071831939            1032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841734), mRNA.
ACCESSION   XM_071831939
VERSION     XM_071831939.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1032
                     /gene="LOC139841734"
                     /note="uncharacterized LOC139841734; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841734"
     CDS             1..1032
                     /gene="LOC139841734"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688040.1"
                     /db_xref="GeneID:139841734"
                     /translation="MGMKVKHLMIFAEKMLKIFWQMFSKALCQIQCNISLNSQISSTL
                     GVYSGLTDSLDYPQRFEGMVSTYNWDEPVPCRVFPMTLQGSAREWFHSLQACGIIGFV
                     DLREKFLLQFQNLLSQKKTHIECHDIKQGNKETLSALLTRLRRDVPQTFAKVQQETYD
                     YLRDGEDSTITPACGWGRDKSWQDDNDSFLNGNMDSYRGSGFPRRNNGGGYLRNERFQ
                     GQNDNHGYGHRDRYSMRKWNNESFNIIHMLTKTPKEILIQERVAKSFPDPQPLGENSR
                     CDRSKFYIFHDDYGHDTNRCRDLAELIAEAYEQGKLDLLIAQNTASTANVIIMPTEAN
                     TSNAPNVVD"
     misc_feature    226..>444
                     /gene="LOC139841734"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atgggaatga aggtgaagca tctgatgata ttcgcagaga agatgcttaa aattttttgg
       61 cagatgtttt caaaagcatt gtgccaaatt caatgcaaca taagtttgaa cagccaaatt
      121 tcttcaacat tgggagttta ctcaggttta accgattctt tagattatcc gcaacgcttt
      181 gaagggatgg tgagcaccta taactgggat gagccagttc cttgtagagt tttccctatg
      241 actctgcaag ggtcagcaag ggagtggttc catagcctac aagcttgcgg tattattggc
      301 tttgtcgatc ttcgcgaaaa attcttgttg cagttccaga atctattgtc gcagaaaaag
      361 acgcatatag aatgtcatga tattaaacaa ggcaacaaag aaactttaag tgcattactc
      421 acgcgattgc gaagagatgt cccgcagact tttgctaagg ttcagcaaga aacatatgat
      481 tatctccggg atggagagga tagtactata acccctgcat gtgggtgggg tagagacaaa
      541 agttggcagg atgacaatga ttcttttctc aatggtaaca tggatagtta tcgcggttct
      601 ggatttcccc ggagaaataa cggcggtggt tacctgcgaa atgagaggtt tcagggtcag
      661 aatgataacc atggttatgg tcatcgcgat cgctattcta tgcgaaagtg gaacaacgaa
      721 tctttcaata tcattcatat gctaacaaaa acccctaaag aaattttgat acaagaaagg
      781 gttgcaaagt cttttcctga tccacagcct ttgggagaga atagtaggtg tgatcggtca
      841 aagttttata ttttccatga cgattatgga catgacacca accgctgtag agatttggcg
      901 gaattgatcg cagaggcata tgaacaaggt aagctggacc ttttaatcgc gcagaacact
      961 gcaagtactg cgaatgtgat tataatgcct acagaagcca atacctcaaa tgcgccaaat
     1021 gtggttgact ga
//
LOCUS       XM_071831940             724 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841735), mRNA.
ACCESSION   XM_071831940
VERSION     XM_071831940.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..724
                     /gene="LOC139841735"
                     /note="uncharacterized LOC139841735; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841735"
     CDS             1..588
                     /gene="LOC139841735"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688041.1"
                     /db_xref="GeneID:139841735"
                     /translation="MSLDTSMAASCISCSSSSSLSFILQPEFLKIKSHKPISLSWCSS
                     FPQLNISFNSVSPNRNLRNQGFVVQAAWTRRSRSEAEKRPNKKSWKQRTDMYMRPFQL
                     NIFFSKRFIHAKVMHRGTSKVISVATTNSKDLRNALPSLIDNEACRVIGTLIAERSKE
                     ADVFAVAFEPKKNERIEGRLAIVLDTIKDNGIIFV"
     misc_feature    <292..>504
                     /gene="LOC139841735"
                     /note="Ribosomal protein L18 [Translation, ribosomal
                     structure and biogenesis]; Region: RplR; COG0256"
                     /db_xref="CDD:440026"
ORIGIN      
        1 atgagtttag acacttcaat ggccgcttct tgtatatctt gttcatcctc atcatcgtta
       61 tcattcattc tccaaccaga attcttaaaa attaaatccc acaaaccaat ttcattatca
      121 tggtgttctt catttcccca attaaatatt tcgttcaatt cagtttctcc aaatcgtaat
      181 cttagaaatc agggatttgt tgttcaagca gcatggacaa gaagatcacg aagcgaagca
      241 gaaaaaagac cgaacaagaa atcatggaaa caaaggacgg atatgtacat gagaccattt
      301 caactaaaca ttttcttttc taaaagattc attcatgcaa aagtaatgca tcggggtact
      361 agcaaagtga tatcggttgc caccacaaat tcaaaggatt taaggaacgc attgccttca
      421 ctcattgata acgaggcttg cagagtgatt ggaactttaa tagccgaaag atcaaaggaa
      481 gcggatgtgt ttgcagtagc cttcgaaccg aaaaagaacg aaagaattga agggagactg
      541 gcaattgttc ttgatactat aaaggataat ggtatcatat ttgtatgaac tttttagtaa
      601 ttacatagtt ggcatgatta gttgcggtaa cattttatgt tcaaactagc tatatccaaa
      661 agttctagcc agatgctttt ttgttatccg aattttagtt tttcatataa agtgcaactg
      721 tgta
//
LOCUS       XM_071831941            1581 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NUCLEAR FUSION
            DEFECTIVE 4 (LOC139841736), mRNA.
ACCESSION   XM_071831941
VERSION     XM_071831941.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1581
                     /gene="LOC139841736"
                     /note="protein NUCLEAR FUSION DEFECTIVE 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139841736"
     CDS             38..1573
                     /gene="LOC139841736"
                     /codon_start=1
                     /product="protein NUCLEAR FUSION DEFECTIVE 4"
                     /protein_id="XP_071688042.1"
                     /db_xref="GeneID:139841736"
                     /translation="MALQWLSLVGTIWLQSISATNTNFPAYSSQLKLLLSLSQLQLNN
                     LAFASDAGKIFGFLSGLAAVYLPLWLVLLIGSTLGFIGYGVQYLFLVTNKVSSLPYTL
                     VFLLTALAGNSICWINTVCYIIAIQNFQFDRQLAVGLSTSYQGLSAKIYSDVVDVFFE
                     SSSSIERARSYLLLNSTLPPVVCLITSPLIRVVTTPRSRSLSNGFIFIFSITIFTGTF
                     AVITSLGLRKGLITPLVILCGLCVFLLILLVVPLMENLRERMENKCMIRNYGKKVCDV
                     SSMVEENKGVVNEDGVKDEGEFMSNDDEEMGAKVMVKRLNFWLYFFVYMFGATVGMVY
                     LNNLGQIVESRGSSKTSSLVSLASSFGFFGRIFPCLLDYHISRTKCKVSRPGLIALMM
                     VPMTSAFFLLINDNNICLHISTATIGICTGAITSISVSTTAELFGTNNFGVNHNILVT
                     NIPMGSFIFGNMAALLYRNQGLENENGKCMGIKCYETSFITWGCLCLLGTFLAIILHL
                     RTK"
     misc_feature    44..1537
                     /gene="LOC139841736"
                     /note="Major Facilitator Superfamily; Region: MFS;
                     cl28910"
                     /db_xref="CDD:475125"
     misc_feature    order(77..82,89..94,101..103,203..205,377..382,386..394,
                     401..403,458..460,467..472,479..481,1007..1009,1016..1021,
                     1028..1036,1043..1045,1118..1120,1130..1132,1295..1300,
                     1310..1312,1322..1324,1370..1372,1379..1384,1391..1396,
                     1403..1405)
                     /gene="LOC139841736"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340912"
ORIGIN      
        1 tcaagaatat tgtcaagaaa ttaagctctt aattaaaatg gcacttcaat ggctaagttt
       61 agttggtaca atttggctcc aatccataag tgcaacaaac acaaatttcc cagcatattc
      121 atctcaactc aaactccttc tttcactctc acaacttcaa ctcaacaatt tagcttttgc
      181 ttctgatgca ggcaaaatat tcggtttctt atcgggttta gcagccgttt atctcccttt
      241 atggcttgtc cttttaatcg gttcaacgct cggtttcatc ggttatggtg ttcaatatct
      301 attccttgta acaaataaag tatcttcttt accctacact ttagtatttt tactaactgc
      361 tttggctggc aatagcattt gttggatcaa cacggtttgt tacataatcg cgatacaaaa
      421 tttccagttt gatcgacaac tagcagtcgg tttatcgact agttatcaag ggttaagtgc
      481 aaagatttat tctgatgtgg ttgatgtgtt ttttgagtca tcatcatcta tagaaagagc
      541 aagatcatat cttttgttga attccacttt accccctgta gtttgtttaa tcacttcacc
      601 gttaattcga gtggttacta cgccaagatc aaggagttta tcaaatggat ttattttcat
      661 cttttcaatc acaatattca ctgggacttt tgctgtgatt acaagcttag gattaagaaa
      721 aggactaatt acaccattag taattttatg tggtctatgt gtttttttgt tgatactatt
      781 agttgtccca ttaatggaaa acttaagaga aagaatggag aataaatgca tgataagaaa
      841 ttatgggaag aaagtatgtg atgtaagtag catggtggaa gaaaataaag gggtggtaaa
      901 tgaagatggg gtgaaagatg aaggtgagtt tatgtctaat gatgatgaag aaatgggtgc
      961 taaagttatg gtaaaaagat tgaatttttg gttatatttt tttgtgtata tgtttggtgc
     1021 aacagttggc atggtgtatt tgaacaattt gggacaaatt gttgagtctc gtgggagttc
     1081 aaaaacatct tcgttggtat cattagcttc ttcatttgga ttctttggcc gtatctttcc
     1141 ttgcctactt gattaccata tatcaaggac caaatgcaaa gtttcaagac caggacttat
     1201 agcacttatg atggtaccaa tgacgtcagc atttttctta cttatcaacg ataataacat
     1261 atgtcttcat ataagcacgg ccacaatcgg gatatgcacg ggtgcaatca catcgatatc
     1321 tgtttcaaca actgccgagc tttttggaac caataacttc ggcgtgaacc ataacatttt
     1381 ggtcacgaat atcccaatgg ggtcgtttat atttggaaat atggcggcat tactttatcg
     1441 gaatcaaggg cttgaaaatg agaatggtaa atgtatgggg atcaaatgtt atgaaacaag
     1501 tttcataaca tggggttgtc tttgtttgtt aggaacattt ttagctataa tacttcattt
     1561 aaggacaaaa taagacttga a
//
LOCUS       XM_071831942            2560 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841737), mRNA.
ACCESSION   XM_071831942
VERSION     XM_071831942.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 78% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2560
                     /gene="LOC139841737"
                     /note="uncharacterized LOC139841737; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841737"
     CDS             1..2487
                     /gene="LOC139841737"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688043.1"
                     /db_xref="GeneID:139841737"
                     /translation="MRTYGHLRSCSPNLGAGRPRGVRGGCRVATLGRIRVGSWNIGTL
                     TGKRIELVDTFRKSNVDIVCVQETRWKGEEAIEIEDYKLWYSGSRIARNGVGIFLGKL
                     HIDNVVDVGRFSDRIMSVSLIIKEETFTVISAYAPHAGLGDAEKKSFWELLDEVVRGC
                     PADHRLIIGGDLNGHIGAETEGYEGAHGGFGFGPRNEEGRSILEFAIAHELVVANSFF
                     KKRDAQLATFHSGDRSTQIDFLLLRKGELRTCRDCKVLPALTCSSQHRFLVMDLVTKG
                     RVGRRARVVQPRILWKNLYGANAETFRANVVERLSVEGDNVAPTEADQLWNRMASTIR
                     DVAKETLGMATGTSRAHKSIRESWWLSDDVQTKVSLKQARFRELITLGEGSHEERTRV
                     EERYKEAKREAKKAVAIAKDKVYEDLYRKLDSKEGANDVYRIAKARERRSRDLGNIKY
                     IKDVAGQSIVREDLIRKRWEDYFASLFGRGRPEWNGESHEVREFQNNCFCTMINEGEV
                     RLALRKMGRNKAVGPDQIPIEAWKCLGGDGTLNVRGVPSRYIRSIRDMYEGAKTRVRT
                     AVGNTEFFPIEVGLHQGSALSPYLFALILDELTHRIQDNIPWCLIFADDIKSEEEHDD
                     IVDIRIGDQILPPQGSFRYLGSILHNSGRIDEDVTHRIRVGWLKWRAAKGVLCDKKVP
                     LKLKGKFFKVAIRPAMLYGSECWPMTKAQERRMEVAEMRMFRWTCGKTMLDMIPNGVF
                     REKLEVGNIINKLREGRLRWFGHVRRRPILAPVRRVETLAVGGVRRRGRPRRRMEDRL
                     KLDMKELILTEDMTFDRSLWRSRIRIIERT"
     misc_feature    106..816
                     /gene="LOC139841737"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(118..120,199..201,403..405,511..513,517..519,
                     712..714,790..795)
                     /gene="LOC139841737"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(199..201,790..792)
                     /gene="LOC139841737"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(403..405,517..519,793..795)
                     /gene="LOC139841737"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    <1570..1944
                     /gene="LOC139841737"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1747..1749
                     /gene="LOC139841737"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgcgtactt atggtcactt gaggtcatgt tctcctaatt taggggcggg taggcctaga
       61 ggggttagag gtggttgtag ggtagccacc cttggtagga ttagagtggg tagctggaat
      121 ataggaacct tgactggtaa gaggattgag ctcgttgata cctttcgtaa gagtaatgta
      181 gacattgttt gtgttcaaga gactagatgg aagggtgaag aggcgataga gattgaggac
      241 tataagttgt ggtactcggg ttctaggata gcacggaacg gggtaggtat ctttttaggt
      301 aaactacata tagataacgt cgttgacgtg ggcaggttta gcgataggat tatgtcggtt
      361 agtttaatta ttaaggagga gactttcacg gtcattagtg catacgcacc tcatgcgggt
      421 ttaggtgatg ccgaaaagaa gagtttctgg gaattgttag atgaggtggt gagggggtgc
      481 ccagcggacc atcgactgat tataggtggt gatctgaatg gacatatagg agcggagaca
      541 gaaggttatg agggagccca tgggggcttt gggtttggtc ctagaaatga agaggggcgc
      601 tcaattcttg agtttgccat tgcccacgag ttggtggtag caaactcttt cttcaagaag
      661 agggatgctc agttagccac tttccatagc ggggatcgta gcacccagat tgactttttg
      721 cttcttcgta aaggggaact taggacctgt agggactgta aggtccttcc agctttgacg
      781 tgctcctccc agcacagatt tctggtcatg gacctagtca ctaagggaag agttggcagg
      841 agggctaggg ttgtacaacc tagaatcctt tggaagaacc tctatggagc gaatgcggag
      901 acttttagag cgaatgttgt tgagagattg agtgtagaag gggataacgt tgcccctaca
      961 gaagcagacc agttatggaa tcgcatggcg tccactatca gagatgtggc aaaagagacc
     1021 ttaggaatgg ctacagggac atcgagagcc cataagagta taagagagtc gtggtggctt
     1081 agtgacgatg tccaaacgaa agtctcttta aagcaggcga ggtttaggga gctcattact
     1141 cttggagaag ggtcacatga agagagaact agggtagaag aaagatataa agaagctaaa
     1201 agagaagcaa agaaggccgt agcaattgca aaagacaaag tatacgaaga tttatatagg
     1261 aaactagact ctaaagaggg agctaatgac gtatatagga tagccaaagc tagggagcga
     1321 agaagcaggg acttaggtaa catcaaatat atcaaggatg tagcgggtca aagtatagta
     1381 agagaagatc ttattaggaa aagatgggaa gattattttg catctctttt cggtagggga
     1441 agaccagagt ggaacggtga atcccacgag gttcgggagt ttcaaaacaa ctgtttctgc
     1501 acaatgatta acgaggggga agttagattg gccctacgaa agatggggag aaacaaagca
     1561 gtaggaccgg atcaaattcc gattgaggcg tggaagtgcc taggaggcga tgggacgctt
     1621 aatgttaggg gtgtcccaag tagatatata agatctatta gagatatgta cgagggggcg
     1681 aagactcgtg tacgcacggc ggtaggaaac acagagtttt tccctattga ggtaggtcta
     1741 catcaaggat ctgcccttag cccttatctt tttgctttga tcctagacga gttaactcat
     1801 aggatacaag acaacatccc atggtgcctg attttcgccg atgatattaa gagtgaagag
     1861 gaacacgacg atatagtgga tatccgaatt ggggatcaga ttttaccccc gcaagggtcc
     1921 tttagatatt taggctcgat tcttcacaat tcgggaagga tagatgagga cgtgacgcat
     1981 cgtatacgtg taggatggtt gaagtggagg gctgcgaaag gggtgttgtg cgacaagaag
     2041 gtgcccctta agctgaaagg gaaattcttc aaggtggcaa tcagaccagc catgttgtac
     2101 ggatcagagt gttggccaat gacgaaggcc caagagagga gaatggaggt ggcagaaatg
     2161 aggatgttta gatggacgtg tggtaagacc atgctagata tgataccaaa tggagttttt
     2221 agggagaaat tggaagttgg gaacatcatc aacaaactta gggaaggacg acttagatgg
     2281 tttgggcatg tcaggaggcg cccaatttta gccccggtta ggagagtcga gaccctcgcc
     2341 gttggcggcg taaggagaag gggtagacct agacgtagga tggaggatag attgaagctg
     2401 gacatgaaag agcttatact gacggaggac atgacttttg ataggagcct gtggaggagt
     2461 agaattagga taattgagcg cacataaccc ttacaggtac gtatcttttg ccctatctat
     2521 ttcgttttta tgagcacatc tggccggagg tcctttttgg
//
LOCUS       XM_071831943             396 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841738), mRNA.
ACCESSION   XM_071831943
VERSION     XM_071831943.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..396
                     /gene="LOC139841738"
                     /note="uncharacterized LOC139841738; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841738"
     CDS             1..396
                     /gene="LOC139841738"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688044.1"
                     /db_xref="GeneID:139841738"
                     /translation="MDDIQSYTSNPLPDYFRWFHRRHDSRGMWSISSELKMTAALRHL
                     AYGCTPNALDEHLQMSERVGRESLFNFTKCIIDFYANDYLSEPTVHDIQHLYEGHEEI
                     HGLPGMLGSIDCMHWAWAKFPVAWRGQFK"
     misc_feature    247..>390
                     /gene="LOC139841738"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggatgata ttcaaagcta cacctcaaat ccgttgccgg attattttag atggtttcat
       61 cgaagacatg attcacgtgg catgtggagt attagttcgg aattgaagat gacggccgca
      121 ctacgtcatc ttgcatacgg ttgcacacct aatgctttgg atgagcatct tcaaatgtcc
      181 gaacgagtag gtagggaatc tttatttaac tttactaagt gcattattga tttttatgcg
      241 aacgactacc taagcgagcc tacggtgcat gacattcaac atttgtacga gggtcatgaa
      301 gagattcatg gtttaccggg catgttgggt agcatcgatt gtatgcattg ggcatgggca
      361 aaatttccgg ttgcctggag aggccaattt aagtga
//
LOCUS       XM_071831944            2693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized WD
            repeat-containing protein C3H5.08c-like (LOC139841739), transcript
            variant X1, mRNA.
ACCESSION   XM_071831944
VERSION     XM_071831944.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2693
                     /gene="LOC139841739"
                     /note="uncharacterized WD repeat-containing protein
                     C3H5.08c-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841739"
     CDS             190..2151
                     /gene="LOC139841739"
                     /codon_start=1
                     /product="uncharacterized WD repeat-containing protein
                     C3H5.08c-like"
                     /protein_id="XP_071688045.1"
                     /db_xref="GeneID:139841739"
                     /translation="MVSSYEEDEYRFFDAQDSISIGSMDRCSEPDNDLETNEYQYDVW
                     AMAPTSVHQRKNTFLKLMGLSYEDQVNEDNAIVEVIEDRIAQTSGTVLRTAIEEEDSS
                     LSTSNSCSPRIQDSDDEENVVKLMTRSEVVSAPVIQKLVDRHIKVADSMSKTMNRVKG
                     QFLGSLRSMASNIAHRNGSNGSSKSLENGSTHWAKVKRVRVHQNKKRLKELSAVFIGQ
                     DIQAHQGSILTMKFSLDGRYLASAGEDAVVRVWKVVEDERSNEIDIPEVDPSCLYFSV
                     NNLFELAPLMAEKQKISKLKSLKKTKSSACVIFPPKIFRILEKPVHEFCGHKGDVLDL
                     SWSKDNLLLSSSVDETVRLWRVGSDCCLKVFRHNNYVTCVQFQPTDENYFISGSIDGK
                     VRIWSVSGCQVVDWIDVREIVTAVAYSPDGKGGVIGSITGCCNFFSISGNCFQLEASV
                     LLNSKKKSPCKRITGFQFCPHDSSKVMVTCADSHVRILDGPTVIGKFRGQRNAGNPFC
                     ASFTSDGKHIVSASEDSNVYVWNFEGPSSFRQKTVRSYECFSAGASVALPWSGLKVQT
                     NPLPPCYFSLGRDYFLESGPKGSATWPEEKLPSDMMMTSPLCKSRYKFFKSSCQSSYN
                     CHTWGMVIVTAGWDGRIRSFLNYGLPVTV"
     misc_feature    <808..1791
                     /gene="LOC139841739"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    868..987
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    997..1167
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1180..1287
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1303..1413
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1426..1545
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1576..1686
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1705..1779
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 aatttattta tttttgtaat ttttaaatcc catttgcatt tcattcctgt ggaagaagaa
       61 aaataaggta tgtatgtatg ttcattgatg agggaataag gcacattgca gattcttagg
      121 gtttaaaggg agttgctttc ttgttggtgg tgacatttat ggattgaaaa aattgtactt
      181 tatacaatca tggttagttc atatgaggaa gatgaatatc gatttttcga tgctcaagat
      241 agcatcagta tcgggtcaat ggaccgatgt tctgagccgg ataatgattt agagactaat
      301 gagtatcagt atgatgtttg ggctatggcc cctacaagtg ttcaccaaag gaagaacact
      361 tttcttaaat taatgggttt aagttatgaa gatcaagtta atgaagacaa tgcgattgtt
      421 gaggtgatcg aagataggat cgctcagaca agtggaactg tgttaagaac agctatcgaa
      481 gaagaagatt cttcgttaag tacatctaat tcgtgttccc caagaattca agattctgat
      541 gatgaagaaa atgtagttaa gttaatgacc cgatcagaag ttgtgtcggc cccagtgatt
      601 cagaaacttg tagatagaca cattaaggtt gctgactcta tgtctaaaac gatgaacaga
      661 gtaaagggtc aatttttagg tagtttaagg tcaatggcaa gtaatattgc tcataggaat
      721 ggaagcaatg gtagttctaa gtctcttgaa aacgggtcga cccattgggc gaaagtgaaa
      781 cgggtcagag tacatcaaaa taagaagaga ttgaaagaat tgtctgctgt atttattggt
      841 caagatattc aagcccatca aggttcaatt ttgaccatga aatttagtct tgatgggcgg
      901 tatcttgcta gtgctggtga agatgcagtt gttcgggttt ggaaagttgt ggaagatgaa
      961 agatcgaatg agattgatat cccagaagtc gacccgtctt gtttatactt cagtgtgaat
     1021 aatcttttcg aattagcacc tttgatggct gaaaaacaga aaattagcaa gctgaaaagc
     1081 ttgaaaaaga ccaaatcttc cgcttgtgtt atcttccctc ctaaaatatt tcgtatattg
     1141 gagaagcccg ttcacgagtt ttgtggacac aaaggggacg tccttgatct ctcttggtcc
     1201 aaagataatc ttcttttatc atcatcggtg gatgaaactg ttcgattatg gagagttggg
     1261 agtgattgtt gccttaaagt cttccgacac aataactacg tgacatgtgt tcagttccag
     1321 cctacggacg aaaattattt tataagcggt tcgattgatg gaaaagttag gatttggtcg
     1381 gtgtctggtt gccaggttgt cgattggatc gacgtacgag aaatagtcac cgctgtagct
     1441 tatagtcctg atggaaaggg tggtgttatt ggatccataa ctggctgttg caatttcttt
     1501 agcatatcag gaaactgctt ccagttagaa gcttcggttt tgttaaatag taaaaagaag
     1561 tcaccttgca agaggataac tggctttcag ttctgcccac atgattcaag taaagttatg
     1621 gtcacttgtg ccgattccca cgtcagaatt cttgatggtc ccaccgttat cggcaaattc
     1681 agaggccaac gaaatgctgg aaatccattt tgtgcgtcgt tcacttctga cgggaaacat
     1741 atagtttcag cgagcgagga ctccaatgta tatgtttgga actttgaagg accttccagt
     1801 tttcgacaaa aaacagtcag atcgtatgaa tgtttctctg ctggtgcctc agtcgcgtta
     1861 ccctggtctg ggctaaaagt tcaaacgaac ccgttgccac catgttactt ctcattgggt
     1921 cgagattact ttctagagtc gggtccaaaa ggttctgcaa cctggcccga agaaaagctt
     1981 ccttctgaca tgatgatgac atcaccgtta tgtaaatcca gatacaaatt ctttaaatct
     2041 tcttgccaga gctcgtacaa ttgtcacact tggggaatgg tgatcgtgac cgcaggatgg
     2101 gatggacgga tcagatcgtt tctcaattat gggctaccag taactgtgtg aaattggtta
     2161 agtcttttat ggaatgaaca taacaagacc atcaaattta atcatttggt acaatgaaaa
     2221 cagccatttg attgagggat tgtatgaatt gcttattcga gaaagttatg tctgctggcc
     2281 cccggggtgg atatggagtt atcaaggacg atggggtata ccgaagatgc tgtgtatcca
     2341 aatagtgggc cccgatggtg gttgagactt taaggagata ggggctaaaa tggcagtaca
     2401 gtgtgaatga ttgagtacga agtggggtcg aagctaaacg atgaaatggg taacaaaggt
     2461 gttttatgtg ccaatagctt tacttttaat tttaagcttt gttctgataa aaataggggg
     2521 taaaaagaaa aggatgttga cgactttagt agaacattaa gagggtaatg ttatctttta
     2581 cttttactaa caaaattgtg atatggtttt tggcattctg tattttgatg ccacccagtc
     2641 attagtatgg agagtaggtc caatgtacat aattgccact tttatagttt cca
//
LOCUS       XM_071831945            2633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized WD
            repeat-containing protein C3H5.08c-like (LOC139841739), transcript
            variant X2, mRNA.
ACCESSION   XM_071831945
VERSION     XM_071831945.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2633
                     /gene="LOC139841739"
                     /note="uncharacterized WD repeat-containing protein
                     C3H5.08c-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841739"
     CDS             130..2091
                     /gene="LOC139841739"
                     /codon_start=1
                     /product="uncharacterized WD repeat-containing protein
                     C3H5.08c-like"
                     /protein_id="XP_071688046.1"
                     /db_xref="GeneID:139841739"
                     /translation="MVSSYEEDEYRFFDAQDSISIGSMDRCSEPDNDLETNEYQYDVW
                     AMAPTSVHQRKNTFLKLMGLSYEDQVNEDNAIVEVIEDRIAQTSGTVLRTAIEEEDSS
                     LSTSNSCSPRIQDSDDEENVVKLMTRSEVVSAPVIQKLVDRHIKVADSMSKTMNRVKG
                     QFLGSLRSMASNIAHRNGSNGSSKSLENGSTHWAKVKRVRVHQNKKRLKELSAVFIGQ
                     DIQAHQGSILTMKFSLDGRYLASAGEDAVVRVWKVVEDERSNEIDIPEVDPSCLYFSV
                     NNLFELAPLMAEKQKISKLKSLKKTKSSACVIFPPKIFRILEKPVHEFCGHKGDVLDL
                     SWSKDNLLLSSSVDETVRLWRVGSDCCLKVFRHNNYVTCVQFQPTDENYFISGSIDGK
                     VRIWSVSGCQVVDWIDVREIVTAVAYSPDGKGGVIGSITGCCNFFSISGNCFQLEASV
                     LLNSKKKSPCKRITGFQFCPHDSSKVMVTCADSHVRILDGPTVIGKFRGQRNAGNPFC
                     ASFTSDGKHIVSASEDSNVYVWNFEGPSSFRQKTVRSYECFSAGASVALPWSGLKVQT
                     NPLPPCYFSLGRDYFLESGPKGSATWPEEKLPSDMMMTSPLCKSRYKFFKSSCQSSYN
                     CHTWGMVIVTAGWDGRIRSFLNYGLPVTV"
     misc_feature    <748..1731
                     /gene="LOC139841739"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    808..927
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    937..1107
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1120..1227
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1243..1353
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1366..1485
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1516..1626
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1645..1719
                     /gene="LOC139841739"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 taatttttaa atcccatttg catttcattc ctgtggaaga agaaaaataa gattcttagg
       61 gtttaaaggg agttgctttc ttgttggtgg tgacatttat ggattgaaaa aattgtactt
      121 tatacaatca tggttagttc atatgaggaa gatgaatatc gatttttcga tgctcaagat
      181 agcatcagta tcgggtcaat ggaccgatgt tctgagccgg ataatgattt agagactaat
      241 gagtatcagt atgatgtttg ggctatggcc cctacaagtg ttcaccaaag gaagaacact
      301 tttcttaaat taatgggttt aagttatgaa gatcaagtta atgaagacaa tgcgattgtt
      361 gaggtgatcg aagataggat cgctcagaca agtggaactg tgttaagaac agctatcgaa
      421 gaagaagatt cttcgttaag tacatctaat tcgtgttccc caagaattca agattctgat
      481 gatgaagaaa atgtagttaa gttaatgacc cgatcagaag ttgtgtcggc cccagtgatt
      541 cagaaacttg tagatagaca cattaaggtt gctgactcta tgtctaaaac gatgaacaga
      601 gtaaagggtc aatttttagg tagtttaagg tcaatggcaa gtaatattgc tcataggaat
      661 ggaagcaatg gtagttctaa gtctcttgaa aacgggtcga cccattgggc gaaagtgaaa
      721 cgggtcagag tacatcaaaa taagaagaga ttgaaagaat tgtctgctgt atttattggt
      781 caagatattc aagcccatca aggttcaatt ttgaccatga aatttagtct tgatgggcgg
      841 tatcttgcta gtgctggtga agatgcagtt gttcgggttt ggaaagttgt ggaagatgaa
      901 agatcgaatg agattgatat cccagaagtc gacccgtctt gtttatactt cagtgtgaat
      961 aatcttttcg aattagcacc tttgatggct gaaaaacaga aaattagcaa gctgaaaagc
     1021 ttgaaaaaga ccaaatcttc cgcttgtgtt atcttccctc ctaaaatatt tcgtatattg
     1081 gagaagcccg ttcacgagtt ttgtggacac aaaggggacg tccttgatct ctcttggtcc
     1141 aaagataatc ttcttttatc atcatcggtg gatgaaactg ttcgattatg gagagttggg
     1201 agtgattgtt gccttaaagt cttccgacac aataactacg tgacatgtgt tcagttccag
     1261 cctacggacg aaaattattt tataagcggt tcgattgatg gaaaagttag gatttggtcg
     1321 gtgtctggtt gccaggttgt cgattggatc gacgtacgag aaatagtcac cgctgtagct
     1381 tatagtcctg atggaaaggg tggtgttatt ggatccataa ctggctgttg caatttcttt
     1441 agcatatcag gaaactgctt ccagttagaa gcttcggttt tgttaaatag taaaaagaag
     1501 tcaccttgca agaggataac tggctttcag ttctgcccac atgattcaag taaagttatg
     1561 gtcacttgtg ccgattccca cgtcagaatt cttgatggtc ccaccgttat cggcaaattc
     1621 agaggccaac gaaatgctgg aaatccattt tgtgcgtcgt tcacttctga cgggaaacat
     1681 atagtttcag cgagcgagga ctccaatgta tatgtttgga actttgaagg accttccagt
     1741 tttcgacaaa aaacagtcag atcgtatgaa tgtttctctg ctggtgcctc agtcgcgtta
     1801 ccctggtctg ggctaaaagt tcaaacgaac ccgttgccac catgttactt ctcattgggt
     1861 cgagattact ttctagagtc gggtccaaaa ggttctgcaa cctggcccga agaaaagctt
     1921 ccttctgaca tgatgatgac atcaccgtta tgtaaatcca gatacaaatt ctttaaatct
     1981 tcttgccaga gctcgtacaa ttgtcacact tggggaatgg tgatcgtgac cgcaggatgg
     2041 gatggacgga tcagatcgtt tctcaattat gggctaccag taactgtgtg aaattggtta
     2101 agtcttttat ggaatgaaca taacaagacc atcaaattta atcatttggt acaatgaaaa
     2161 cagccatttg attgagggat tgtatgaatt gcttattcga gaaagttatg tctgctggcc
     2221 cccggggtgg atatggagtt atcaaggacg atggggtata ccgaagatgc tgtgtatcca
     2281 aatagtgggc cccgatggtg gttgagactt taaggagata ggggctaaaa tggcagtaca
     2341 gtgtgaatga ttgagtacga agtggggtcg aagctaaacg atgaaatggg taacaaaggt
     2401 gttttatgtg ccaatagctt tacttttaat tttaagcttt gttctgataa aaataggggg
     2461 taaaaagaaa aggatgttga cgactttagt agaacattaa gagggtaatg ttatctttta
     2521 cttttactaa caaaattgtg atatggtttt tggcattctg tattttgatg ccacccagtc
     2581 attagtatgg agagtaggtc caatgtacat aattgccact tttatagttt cca
//
LOCUS       XM_071831946             516 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841740), mRNA.
ACCESSION   XM_071831946
VERSION     XM_071831946.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..516
                     /gene="LOC139841740"
                     /note="uncharacterized LOC139841740; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841740"
     CDS             1..516
                     /gene="LOC139841740"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688047.1"
                     /db_xref="GeneID:139841740"
                     /translation="MEKLKEREKESNFCPLYSFEIDETPNENLEFPMVRSDPGEFHVP
                     CKIRGPIPIVGLADTGSCINAMPFYVYNHLGLPSLEPIQEIVCFSDNLLQKPLGIIKD
                     VEIQVGYAFYKVCFVVMDMEEDHITPLLMGSPFLTTARATIDYENNTLVIHYGALIVF
                     IPIVPRARIPR"
     misc_feature    127..411
                     /gene="LOC139841740"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(172..174,178..180,184..186,256..264,388..390)
                     /gene="LOC139841740"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    172..180
                     /gene="LOC139841740"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    172..174
                     /gene="LOC139841740"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(256..267,277..288)
                     /gene="LOC139841740"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggaaaagt tgaaggaaag agagaaagaa agtaacttct gccctcttta ttcatttgag
       61 attgatgaaa ctccgaatga aaatcttgaa tttcctatgg tccgttccga tccaggagaa
      121 tttcatgttc cttgcaaaat tcgtggtccc attcctatcg tgggattagc tgacactggt
      181 tcttgcatta atgccatgcc attttatgtc tacaatcacc taggattacc gtctttagag
      241 cctatccagg aaattgtttg tttttccgat aaccttttgc aaaaaccttt agggatcatt
      301 aaagatgttg aaatccaagt gggttatgct ttttacaaag tttgttttgt ggtcatggac
      361 atggaggaag atcatatcac tcctttactt atgggatctc catttctcac caccgctcga
      421 gcaaccattg attatgaaaa caatactcta gtgattcatt atggtgcgct tattgtgttc
      481 attccaatag ttcctagagc taggattcca agataa
//
LOCUS       XM_071831947            1698 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841741), mRNA.
ACCESSION   XM_071831947
VERSION     XM_071831947.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1698
                     /gene="LOC139841741"
                     /note="uncharacterized LOC139841741; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841741"
     CDS             1..1698
                     /gene="LOC139841741"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688048.1"
                     /db_xref="GeneID:139841741"
                     /translation="MCEITNLRKTTEKNFDGLLRHVAWVEARMDEKDLAIKKLLEENA
                     ELKKEIKLLETEFWELKVKGTDIESYTNHFLELSTLCPKMFPTESRKIERYIEGLPED
                     VQGNVIAAEKVTLDTVILMAQNLMMAKRRRVLASKQVDTKSSDGKIKFEPSQGSNQNI
                     AKKPADSTRTGYIGTKSYYARCERHHPGRCTATCSLCKKVGHPLYEKAYQQMVPSVLK
                     DHSTLKSTKRRKNKTIPIEANMIHSWQAGQRRKAEALEDWKQELITFPSMINTNPSDA
                     PVVIEARIANCIVGRIYTDTRAGADIMYEHCFVQLPKRVKEKLKDTFVPLESFANDPS
                     WSEGSIVLEVVLGKTPFKRTAHIEFLVIKENSQYNVILGQPAMMTFGAVTSTVHEMMK
                     FLIPAGIATLYAERRRKIECVQINRTTIILIVHEDGSVSPNPEFPYQKIIIGDTLAKA
                     TKEKLYKILATNLDVFAWQDSDMTGVPCHIVEHKLGVNLNIPPVCQKKRGMAPDRTNF
                     LRDEVKKLVEAGILREVKYQTWVANPVMVRKPDNSWRMCVDFTDINKACPKDNYPLP"
     misc_feature    883..1125
                     /gene="LOC139841741"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(883..885,889..891,895..897,976..984,1111..1113)
                     /gene="LOC139841741"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    883..891
                     /gene="LOC139841741"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    883..885
                     /gene="LOC139841741"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(976..987,997..1008)
                     /gene="LOC139841741"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
     misc_feature    1558..>1695
                     /gene="LOC139841741"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtgtgaaa tcacgaatct gcgaaaaact accgagaaga actttgatgg cttgcttcgc
       61 catgttgcat gggtcgaggc tcggatggat gaaaaagacc tagcgatcaa gaaactattg
      121 gaggagaatg ctgagttaaa gaaagagata aagttgcttg aaaccgagtt ctgggaactt
      181 aaagttaagg gtaccgacat tgaaagctac actaatcatt ttctagagct ttctaccttg
      241 tgtcctaaaa tgtttcctac tgagtcgaga aagatcgaaa gatacattga aggtctccct
      301 gaggatgttc agggaaatgt tatcgctgct gagaaagtta cccttgatac agtgattctc
      361 atggctcaaa atctgatgat ggccaaaaga agaagagttt tggctagtaa gcaagttgat
      421 actaagagta gtgatggtaa aataaaattt gagccgtctc agggttcaaa ccagaatatt
      481 gctaagaagc cagctgatag tactaggacc ggttacatag ggactaagtc atattatgct
      541 cgttgtgaaa ggcaccaccc agggcggtgc acagctactt gttctttatg taagaaagtg
      601 ggacatccgc tatacgaaaa agcgtaccaa caaatggtgc catccgttct aaaggatcac
      661 tcgactctca agagcaccaa aaggcgtaaa aataagacga tacctattga agcaaacatg
      721 atacactcat ggcaagccgg acaacgaaga aaagcagaag cattagaaga ttggaaacag
      781 gaattgatta cttttccttc catgattaat accaatccat ctgatgctcc tgtagtgatt
      841 gaagctcgaa tagcaaattg tattgttgga aggatatata ctgatactag agctggtgca
      901 gatatcatgt atgagcactg ttttgtacaa ctaccgaaaa gagttaagga aaagttaaag
      961 gatacatttg ttcccttaga aagttttgct aatgatccgt catggtcaga gggaagcata
     1021 gtattagaag tagtattggg aaaaacacca ttcaaaagaa ctgctcatat cgagttttta
     1081 gttatcaaag aaaattcaca gtataatgtc attttaggac aaccagctat gatgacattt
     1141 ggagctgtga cgtcaacggt acacgaaatg atgaaatttc tcataccggc tggcatcgcc
     1201 acgctatacg ctgaacggag aagaaaaata gaatgtgtac aaataaatag aacaactatt
     1261 attctaattg ttcatgaaga tgggtcagta tcaccaaatc cagagtttcc atatcagaaa
     1321 atcattattg gagacacact agcaaaagca acaaaggaaa agctttataa aattttagca
     1381 accaatttag atgttttcgc gtggcaagat tccgatatga ctggagtacc gtgccatata
     1441 gttgaacata agcttggtgt gaatctaaat atcccaccag tatgtcaaaa gaaaagaggt
     1501 atggctcccg atcgaacaaa ttttctcaga gacgaagtta aaaaactagt ggaggctgga
     1561 atattaaggg aagtaaaata ccaaacatgg gtagcaaatc cagtgatggt tagaaaacca
     1621 gataattcat ggaggatgtg tgtagatttc acagatataa ataaagcatg tccaaaagac
     1681 aactaccctt taccataa
//
LOCUS       XM_071831948            1260 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides UPF0481 protein
            At3g47200-like (LOC139841742), mRNA.
ACCESSION   XM_071831948
VERSION     XM_071831948.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1260
                     /gene="LOC139841742"
                     /note="UPF0481 protein At3g47200-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139841742"
     CDS             1..1260
                     /gene="LOC139841742"
                     /codon_start=1
                     /product="UPF0481 protein At3g47200-like"
                     /protein_id="XP_071688049.1"
                     /db_xref="GeneID:139841742"
                     /translation="MEVSKNVGAIVKNLIDSAREGFNPLPKTTTIYTVPSRLRDLSPN
                     SFTPRLVSIGPLHKQDMNVQEFEQYKPFIFGDLLKKVDSTLNETTVEACVKKVLARLD
                     DIKACYSMTNNTYQDAELVKMMVMDACYILFILIHYDLILTNNRAFLSTLVPDLVMLE
                     NQIPFFVLRDIFECTVLKFQPTSYLNMMLLKLLENVKPFEAELGPEINHATGTKYDHI
                     LDFLHESYEPTSNVSSTGQSFIVPPSYSVTELEKAGVKFVLNKDISKCPLAINFESNW
                     YNPTLRLPLLSIDLYTEVVFYNLIALELRRLKTAYFTSYVVAMMNLVKTTEDHLKLEG
                     LKIARNNPSGTQYVVDLIHNLSKGCDLKEFLYAEDWEKIHKYCNSPIGWTRRTYFSGA
                     WSYIASISGLIIFILTVIQTYCSIRGK"
     misc_feature    91..1221
                     /gene="LOC139841742"
                     /note="Plant protein of unknown function; Region: DUF247;
                     pfam03140"
                     /db_xref="CDD:460823"
ORIGIN      
        1 atggaagttt caaaaaatgt gggtgcaatt gtcaaaaatc tgattgattc tgcgagagaa
       61 gggtttaatc cattacccaa aactacaaca atttatacag ttcctagtag gttgcgagat
      121 ctcagcccaa attctttcac ccctcgactg gtctctattg gacctctgca caaacaagat
      181 atgaatgtgc aagaatttga acagtataaa ccttttattt ttggagacct attaaaaaaa
      241 gtagattcca cactgaatga gacgacagtg gaagcatgtg tgaagaaggt gcttgctcgt
      301 ttagatgata tcaaagcatg ttattcgatg acaaataata catatcaaga cgcggaactt
      361 gtgaaaatga tggtgatgga tgcttgttac atactattta tacttattca ttacgatctg
      421 atcttaacaa ataatagagc ttttctatca actctggttc ctgatctagt gatgctagaa
      481 aatcagatcc ctttctttgt cctgcgcgac atttttgagt gcaccgtctt gaaatttcaa
      541 cccacatcct atcttaatat gatgctcttg aaacttttag aaaatgtaaa gccttttgaa
      601 gcagagctag gacctgaaat aaatcatgct actggcacaa aatatgacca tatccttgat
      661 tttctgcatg aatcttacga gcctacgagt aacgtgtcat caactggtca gtcatttatt
      721 gtgccaccgt cttattcagt tacagaactc gaaaaggctg gagtaaaatt tgtgcttaat
      781 aaagacataa gcaaatgtcc attagctatc aacttcgaat caaattggta taatccaaca
      841 ttgagactcc cattattgag cattgatcta tacactgagg tagtttttta taacctcatt
      901 gcgttggagc tgcgtcgttt gaagactgct tactttacat catatgttgt tgctatgatg
      961 aatctagtaa aaacaacaga agaccatctt aagttagaag gcttgaaaat tgctagaaac
     1021 aatccaagtg gaacccaata tgttgttgat ttgatccata acttgtcaaa aggatgtgat
     1081 ctgaaagagt ttttatacgc tgaagattgg gaaaagatcc acaagtattg caatagcccg
     1141 atagggtgga cgaggcgtac ctactttagc ggagcatgga gttacattgc ttcaatctct
     1201 ggattaatca tatttatact tactgtcatt cagacatatt gttctattcg cggtaagtaa
//
LOCUS       XM_071831949            1260 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841743), mRNA.
ACCESSION   XM_071831949
VERSION     XM_071831949.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1260
                     /gene="LOC139841743"
                     /note="uncharacterized LOC139841743; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841743"
     CDS             1..1260
                     /gene="LOC139841743"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688050.1"
                     /db_xref="GeneID:139841743"
                     /translation="MGDDIPLRAAANLNMSHLHINADDIHNFVLYEVEILLNQCSKSI
                     PDFALPSLPVDLLADLANRLIMEERNYDRTVLNAERLELERQMNSKQKQIYDLITSTS
                     LNEQTEHKAIIAALRSRGKIVLAFASSGIASLLLPSGRTAHSRFKLPLVITDESMCNV
                     KKNNQMATLLQNKDLIVWDEVPMNDKRCFEALDRSLRDILGSTEEYFGGKSVILGGDF
                     KQTLSIQTKGGKSAILGACITTSHLWQRFKVFILAENMRLLRPGMTPSMRVKNAEFSK
                     WLLRVGNGEIGVPDTEDLLNSHWVQIPDQFCIPDDENGLSTQQKVIVCPKNDAADTIN
                     SLIVDMVDVPVTTYCSYDTATPHGNDGGEAELLYPAEYLNTLNYPGLPPHELHLKKGV
                     PAILLRNINIADNLDLVDKFKRADVDS"
     misc_feature    259..1218
                     /gene="LOC139841743"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atgggtgatg atataccgct tcgtgcagct gccaatttaa atatgtccca cttgcatata
       61 aacgccgatg acatacataa ctttgtcctg tatgaggtag agatcctttt gaaccagtgt
      121 tcgaaatcga ttcctgattt cgcattaccg tcgctgccag ttgacctgct cgcagatttg
      181 gccaaccgac ttatcatgga ggagagaaac tatgatcgta cagttttaaa cgccgaacgc
      241 ctagaactcg aacgtcaaat gaattcgaag caaaagcaaa tttacgatct tataacaagc
      301 acttcattga atgaacaaac tgaacataaa gccataatcg cagcactgag atctagaggt
      361 aagatagttc ttgcttttgc atcatctggc attgcatctc ttcttctacc ttcaggaaga
      421 accgcacatt ctcgattcaa actaccgctg gtcataactg atgaatcgat gtgcaatgtc
      481 aagaaaaata accagatggc aacattactg cagaacaaag accttattgt atgggatgag
      541 gtgccaatga atgataaacg ctgtttcgaa gctcttgata ggagtcttcg agatatatta
      601 ggaagcactg aagaatattt tggtggtaag tctgtgatac ttggtggtga ctttaaacaa
      661 acgttatcta ttcagacaaa aggagggaaa tcagctatcc ttggtgcttg tattacgact
      721 tcacatttgt ggcagcgatt caaggttttc atacttgcag aaaacatgcg actacttagg
      781 ccagggatga caccatcaat gagggtgaag aacgcagaat tttcgaagtg gttgttgagg
      841 gtaggaaatg gtgaaattgg tgtgcctgac acagaagacc tgttgaatag tcattgggta
      901 caaatccctg atcaattctg tattcctgat gatgaaaatg gattgtcaac gcagcaaaaa
      961 gtaattgtct gtcccaagaa cgacgctgcc gatacgataa acagcttaat cgtcgatatg
     1021 gttgatgttc cagttacaac ttactgcagc tatgacactg caactccaca tggaaatgac
     1081 ggtggtgagg cggagttgct ctaccctgca gaatatctaa atacgctgaa ctaccctggg
     1141 ttgccaccgc atgagctgca tttaaaaaag ggtgtaccag ccattctgct tcgcaacatt
     1201 aatatagcag ataatttgga tctagtagac aaatttaaaa gagcagatgt tgatagctaa
//
LOCUS       XM_071831950            1029 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841744), mRNA.
ACCESSION   XM_071831950
VERSION     XM_071831950.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1029
                     /gene="LOC139841744"
                     /note="uncharacterized LOC139841744; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841744"
     CDS             1..1029
                     /gene="LOC139841744"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688051.1"
                     /db_xref="GeneID:139841744"
                     /translation="MKSQKINRVGNGEQPEQRKNDAKTTANNSKQTTRNLMRETNNYI
                     LRNAFVGNNPYGGKTTHWSHDSKFMINHKTSVMPLDNTGWNGVDGFKFIHFDDLVIGL
                     VTKYSDERRYGDGDELQNKYIVIDLKDLSGVVLSCTLRGKFMRDFQNHLKEAIDQECA
                     SSLTPPPKQLKGWFNDVKAVGCNELAIHNLGIYVVFVEIIVVLPDDEWCYIGCKKCHR
                     KANPADTCVDLTLDIDALLALIRRCSKCQDDPQVCMRYKVNVRVEDKIEDSNGTVSFT
                     LFESQVINYVTKTAYKLQKSLPDGQEKPDELNALTGKKILFKVEVSHYNLKQSNLFFT
                     VKDSCCIC"
     misc_feature    577..>966
                     /gene="LOC139841744"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(580..582,940..942,946..948,952..954)
                     /gene="LOC139841744"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(595..603,775..780,793..798,802..804,820..828,
                     832..834,937..939,958..966)
                     /gene="LOC139841744"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atgaaaagcc aaaaaattaa cagggttggg aatggtgaac agcctgaaca acgcaagaac
       61 gatgcaaaaa cgacagccaa caatagcaag caaacaacac gaaatttaat gagagaaaca
      121 aataactaca tactgagaaa tgcatttgtt ggcaacaatc cttatggagg aaagaccacc
      181 cattggtctc atgactctaa gtttatgatc aatcacaaaa catctgttat gcctcttgat
      241 aatactgggt ggaatggtgt tgatggattt aagttcatcc attttgatga tttggttatt
      301 ggcttggtta caaaatacag tgacgaaaga cggtatggtg atggtgacga gctccaaaat
      361 aagtatattg ttatcgactt aaaggatctt agtggtgttg ttttatcgtg tacattgagg
      421 ggcaagttta tgagggattt tcaaaatcat ttgaaagaag caatcgatca agagtgtgct
      481 tcttctctca ctccacctcc taaacaactg aagggttggt ttaatgatgt taaggctgtt
      541 gggtgtaatg agttagcaat acacaatctt ggaatttatg ttgtttttgt tgaaataatt
      601 gtcgtcctgc ctgatgatga atggtgttat atcggttgta aaaaatgcca tcgtaaagca
      661 aacccagcgg atacatgtgt tgatttgaca cttgatattg atgcacttct ggctctaata
      721 cgtaggtgca gtaagtgtca agatgatcca caagtctgta tgaggtacaa agtgaacgtt
      781 cgtgttgaag ataaaataga ggactcaaat ggcacagtgt cgtttacact atttgagtct
      841 caggtcatca attatgttac aaagacggca tataagcttc agaaatcatt acctgatggc
      901 caggaaaaac cagatgagct caatgctctt actggaaaga aaattctatt taaggttgaa
      961 gttagtcatt acaatcttaa acaatctaat ctgtttttta ccgtcaagga ctcatgctgc
     1021 atttgttga
//
LOCUS       XM_071831951             558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841745), mRNA.
ACCESSION   XM_071831951
VERSION     XM_071831951.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..558
                     /gene="LOC139841745"
                     /note="uncharacterized LOC139841745; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841745"
     CDS             1..558
                     /gene="LOC139841745"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688052.1"
                     /db_xref="GeneID:139841745"
                     /translation="MPGIANNGPYVPITTIEVRPATKDSPVTEAREVDLPPSRWEDED
                     KLRVGLEPKIKTMIAITLPNHMFKLIKRKTSSKAILDYLDVTYGGKDEVRQNKIISLK
                     RECELFFGYKNETLKKTFVRFNSLVANLDNLKVKYTDFEQVNRFTDSLPTKLKPVTNP
                     LRTTQTLKNYDMSSIYGTRWNHEKA"
     misc_feature    172..>453
                     /gene="LOC139841745"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgcccggaa tcgcaaataa tggcccatat gttcccatta ccaccattga agttagacct
       61 gcaactaaag attctcctgt tactgaagca agagaggttg atcttccccc atctagatgg
      121 gaggatgaag acaaacttcg tgttggactt gaacctaaaa tcaaaactat gatagctata
      181 actttaccta atcatatgtt taaattgatt aagaggaaaa catcttctaa agctattttg
      241 gactatcttg acgtcactta tggtgggaaa gatgaggtca ggcaaaacaa aatcatttct
      301 ttaaaaaggg aatgtgagct cttctttggt tacaagaatg agactttgaa aaaaaccttt
      361 gtcaggttca actctctggt agctaacctg gataacttga aagtcaaata cacagacttt
      421 gaacaggtca atagattcac tgactcatta cctaccaagt tgaaacctgt cactaatcct
      481 ctaaggacaa cgcagacttt aaagaattat gacatgtcat ctatatatgg tactcgttgg
      541 aaccatgaga aggcataa
//
LOCUS       XM_071831952             726 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841747), mRNA.
ACCESSION   XM_071831952
VERSION     XM_071831952.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..726
                     /gene="LOC139841747"
                     /note="uncharacterized LOC139841747; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841747"
     CDS             1..726
                     /gene="LOC139841747"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688053.1"
                     /db_xref="GeneID:139841747"
                     /translation="MASECKAGRNVCFGCEKTGQFRKNCPNGNKNTEPARGRAFNINS
                     SEARDPKLVTGMFLLDNHHAYLIFDSGADRSFVSKGFFHNLKNPVSSLENVYSIELEN
                     GKLVRADKIHRDCTLNLAGKSFRIDVIPIMLGSFDLVVRMDWLSENRSDIVCYQKAIR
                     IPVAKDEPLMVYGERSNTLIHFINYLKAQKHMRKGCLAMLVHVSKTEHEVKKLEDVPI
                     VRDFPDVFLDELPGLPLHRDVEF"
     misc_feature    103..477
                     /gene="LOC139841747"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(205..207,211..213,217..219,292..300,415..417)
                     /gene="LOC139841747"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    205..213
                     /gene="LOC139841747"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    205..207
                     /gene="LOC139841747"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(292..303,313..324)
                     /gene="LOC139841747"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggcctcag agtgtaaagc tggtagaaac gtttgttttg gatgcgagaa aactggtcaa
       61 tttagaaaga attgtccgaa tgggaataag aacactgaac ctgctagggg cagagctttc
      121 aacatcaact ctagcgaagc tcgtgatccc aagttagtca cgggtatgtt tttactcgac
      181 aatcatcatg cttatttaat ttttgattct ggtgctgata ggagttttgt gtctaaaggg
      241 tttttccata atcttaagaa tcctgtatcg tcattagaaa acgtgtactc tatagaacta
      301 gagaatggta agctagtgag agctgataag atccatcgtg attgtacttt gaatttggct
      361 gggaaatctt ttagaataga tgtgataccg attatgctgg gaagttttga ccttgtggtt
      421 agaatggact ggttatctga gaatagatcc gacattgtct gttaccagaa agcgattcgc
      481 attcctgttg ccaaagatga gcctctgatg gtgtatggag agcgaagcaa tacactgata
      541 cacttcatta attatttgaa ggcacagaaa cacatgagaa agggttgtct tgctatgttg
      601 gttcacgtga gcaaaactga acatgaagtc aagaaacttg aagatgtgcc gattgttaga
      661 gactttcccg atgtttttct ggacgagtta cccggattgc cactgcatag agacgtagaa
      721 ttttag
//
LOCUS       XM_071831953            1122 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g23880-like (LOC139841749), mRNA.
ACCESSION   XM_071831953
VERSION     XM_071831953.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1122
                     /gene="LOC139841749"
                     /note="F-box/kelch-repeat protein At3g23880-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 36 Proteins"
                     /db_xref="GeneID:139841749"
     CDS             1..1122
                     /gene="LOC139841749"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g23880-like"
                     /protein_id="XP_071688054.1"
                     /db_xref="GeneID:139841749"
                     /translation="MEDYLPKELLSDILSKLPSKTILRCRSVCKSWFSLISTREFQIF
                     YLEKYNKSNPRLLMRRYDLMHDREMYSVHHDSLALTVDPDTVIEFPFNCTPCPRCYLR
                     IIGSIDGVVCLGHKKCAYKEEKIILWNPSIRIKLPIFPPMMRIRRMLNYSVALGFGYD
                     KVTDDYKVVRLAYNYHYSPRPQVDIYGVKTAIWRAIPFPSDFLCIYFKGSPVYLNGCV
                     YWIMYRWVSHGWHIITQCSIMKFDVSAEMFEEIQLPEPLDDESPINLELELFNERLIV
                     IKPMRLQLHSRGASKYNMWALNNYENQNSWEEICKISYGRIDLGRVLRIRDNGELIMG
                     ARYGKTKIRDRNVGYYDSECRGFIMEDSIYIDKYQESLA"
     misc_feature    7..123
                     /gene="LOC139841749"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(13..15,25..27,34..39,46..51,61..63,67..72,82..90,
                     94..96)
                     /gene="LOC139841749"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    310..1053
                     /gene="LOC139841749"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggaagatt atctcccaaa agaactgctc tctgatatcc tatcaaaact accatcaaaa
       61 acaattcttc gttgcagatc tgtgtgcaaa tcttggtttt cattgatatc aactcgtgaa
      121 ttccaaatct tttatctcga aaaatacaac aaatcaaacc cccgtttgct tatgcgtcgc
      181 tatgatttga tgcacgacag ggaaatgtac agtgtgcatc atgacagtct agctttgact
      241 gtagatccag atactgttat tgaatttcct ttcaattgca ccccttgccc cagatgctat
      301 ttgaggataa ttgggagtat cgatggtgtt gtatgccttg gtcataaaaa atgcgcatac
      361 aaagaagaaa aaatcattct gtggaatcca tcaattcgaa taaaactacc tatatttcct
      421 cctatgatgc gcataagacg tatgctgaac tactctgtag ctctaggatt tgggtacgat
      481 aaggtcaccg atgattataa ggttgtccga ttggcttaca attatcacta ttcccctaga
      541 cctcaggttg acatatatgg cgtgaaaact gccatttgga gggcaatccc atttccttct
      601 gattttcttt gcatttattt caaggggtca cccgtgtatt taaacggttg cgtgtactgg
      661 ataatgtatc gttgggtgtc tcacggttgg cacataatta cgcaatgttc aatcatgaaa
      721 tttgatgtga gtgcagaaat gtttgaagaa attcaattgc ctgaaccttt agatgatgaa
      781 tccccaataa acttagagct tgagttattt aatgagcggt tgattgtgat aaaacctatg
      841 cgtcttcagt tgcattcgag aggagcaagt aaatataaca tgtgggcttt gaacaattat
      901 gagaaccaaa actcttggga agaaatatgt aaaatatctt atggtagaat agatttgggc
      961 cgagttttga gaattagaga caatggggaa ctaatcatgg gggctagata tggaaagacg
     1021 aagatacgtg atcgtaatgt gggatattat gattcggaat gcagagggtt tataatggag
     1081 gactcgattt atattgacaa ataccaagaa agtctagctt ga
//
LOCUS       XM_071831954            1185 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g23880-like (LOC139841750), mRNA.
ACCESSION   XM_071831954
VERSION     XM_071831954.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1185
                     /gene="LOC139841750"
                     /note="F-box/kelch-repeat protein At3g23880-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:139841750"
     CDS             1..1185
                     /gene="LOC139841750"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g23880-like"
                     /protein_id="XP_071688055.1"
                     /db_xref="GeneID:139841750"
                     /translation="MEDYLPKELLSDILSKLPSKTILRCRSVCKSWFSLISTREFQIF
                     YLEKYNKSNPRLLMRRYDLMHDREMYSVHHDSLALTVDPDTVIEFPFNCTPCPRYYLR
                     IIGSIDGVVCLGHKKCAYKEEKIILWNPSIRIKLPIFPPMMRIRRMLNYSVALGFGYD
                     KVTDDYKVVRLAYNYHYSPRPQVDIYGVKTAIWRAIPFPSDFLCIYFKGSPVYLNGCV
                     YWIMYRWVSHGWHIITQCSIMKFDASAEMFEEIQLPEPLDDESPINLELELFNERLIV
                     IKPMRLQLHSRGASKYNMWALNNYENQNSWEEICKISYGRIDLGRVLRIRDNGELIMG
                     ARYGKTKIRDRNVGYYDSECRGFIMEDSIYIDKYQESLALLDVGDDVLSEDRRGAEGL
                     NE"
     misc_feature    7..123
                     /gene="LOC139841750"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(13..15,25..27,34..39,46..51,61..63,67..72,82..90,
                     94..96)
                     /gene="LOC139841750"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    310..1053
                     /gene="LOC139841750"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggaagatt atctcccaaa agaactgctc tctgatatcc tatcaaaact accatcaaaa
       61 acaattcttc gttgcagatc tgtgtgcaaa tcttggtttt cattgatatc aactcgtgaa
      121 ttccaaatct tttatctcga aaaatacaac aaatcaaacc cccgtttgct tatgcgtcgc
      181 tatgatttga tgcacgacag ggaaatgtac agcgtgcatc atgacagtct agctttgact
      241 gtagatccag atactgttat tgaatttcct ttcaattgca ccccttgccc cagatactat
      301 ttgaggataa ttgggagtat cgatggtgtt gtatgccttg gtcataaaaa atgcgcatac
      361 aaagaagaaa aaatcattct gtggaatcca tcaattcgaa taaaactacc tatatttcct
      421 cctatgatgc gcataagacg tatgctgaac tactctgtag ctctaggatt tgggtacgat
      481 aaggtcaccg atgattataa ggttgtccga ttggcttaca attatcacta ttcccctaga
      541 cctcaggttg acatatatgg cgtgaaaact gccatttgga gggcaatccc atttccttct
      601 gattttcttt gcatttattt caaggggtca cccgtgtatt taaacggttg cgtgtactgg
      661 ataatgtatc gttgggtgtc tcacggttgg cacataatta cgcaatgttc aatcatgaaa
      721 tttgatgcga gtgcagaaat gtttgaagaa attcaattgc ctgaaccttt agatgatgaa
      781 tccccaataa acttagagct tgagttattt aatgagcggt tgattgtgat aaaacctatg
      841 cgtcttcagt tgcattcgag aggagcaagt aaatataaca tgtgggcttt gaacaattat
      901 gagaaccaaa actcttggga agaaatatgt aaaatatctt atggtagaat agatttgggc
      961 cgagttttga gaattagaga caatggggaa ctaatcatgg gggctagata tggaaagacg
     1021 aagatacgtg atcgtaatgt gggatattat gattcggaat gcagagggtt tataatggag
     1081 gactcgattt atattgacaa ataccaagaa agtctagctt tgttggatgt tggggatgat
     1141 gtccttagtg aggataggag gggggctgaa ggattaaacg aatga
//
LOCUS       XM_071831955            1185 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g23880-like (LOC139841751), mRNA.
ACCESSION   XM_071831955
VERSION     XM_071831955.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1185
                     /gene="LOC139841751"
                     /note="F-box/kelch-repeat protein At3g23880-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 29 Proteins"
                     /db_xref="GeneID:139841751"
     CDS             1..1185
                     /gene="LOC139841751"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g23880-like"
                     /protein_id="XP_071688056.1"
                     /db_xref="GeneID:139841751"
                     /translation="MEDYLPKELLSDILSKLPSKTILRCRSVCKSWFSLISTREFQIF
                     YLEKYNKSNPRLLMRRYDLMHDREMYSVHHDSLALTVDPDTVIEFPFNCTPCPRCYLR
                     IIGSIDGVVCLGHKKCAYKEEKIILWNPSIRIKLPIFPPMMRIRRMLNYSVALGFGYD
                     KVTDDYKVVRLAYNYHYSPRPQVDIYGVKTAIWRAIPFPSDFLCIYFKGSPVYLNGCV
                     YWIMYRWVSHGWHIITQCSIMKFDVSAEMFEEIQLPEPLDDESPINLELELFNERLIV
                     IKPMRLQLHSRGASKYNMWALNNYENQNSWEEICKISYGRIDLGRVLRIRDNGELIMG
                     ARYGKTKIRDRNVGYYDSECRGFIMEDSIYIDKYQESLALLDVGDDVLSEDRRGAEGL
                     NE"
     misc_feature    7..123
                     /gene="LOC139841751"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(13..15,25..27,34..39,46..51,61..63,67..72,82..90,
                     94..96)
                     /gene="LOC139841751"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    310..1053
                     /gene="LOC139841751"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggaagatt atctcccaaa agaactgctc tctgatatcc tatcaaaact accatcaaaa
       61 acaattcttc gttgcagatc tgtgtgcaaa tcttggtttt cattgatatc aactcgtgaa
      121 ttccaaatct tttatctcga aaaatacaac aaatcaaacc cccgtttgct tatgcgtcgc
      181 tatgatttga tgcacgacag ggaaatgtac agtgtgcatc atgacagtct agctttgact
      241 gtagatccag atactgttat tgaatttcct ttcaattgca ccccttgccc cagatgctat
      301 ttgaggataa ttgggagtat cgatggtgtt gtatgccttg gtcataaaaa atgcgcatac
      361 aaagaagaaa aaatcattct gtggaatcca tcaattcgaa taaaactacc tatatttcct
      421 cctatgatgc gcataagacg tatgctgaac tactctgtag ctctaggatt tgggtacgat
      481 aaggtcaccg atgattataa ggttgtccga ttggcttaca attatcacta ttcccctaga
      541 cctcaggttg acatatatgg cgtgaaaact gccatttgga gggcaatccc atttccttct
      601 gattttcttt gcatttattt caaggggtca cccgtgtatt taaacggttg cgtgtactgg
      661 ataatgtatc gttgggtgtc tcacggttgg cacataatta cgcaatgttc aatcatgaaa
      721 tttgatgtga gtgcagaaat gtttgaagaa attcaattgc ctgaaccttt agatgatgaa
      781 tccccaataa acttagagct tgagttattt aatgagcggt tgattgtgat aaaacctatg
      841 cgtcttcagt tgcattcgag aggagcaagt aaatataaca tgtgggcttt gaacaattat
      901 gagaaccaaa actcttggga agaaatatgt aaaatatctt atggtagaat agatttgggc
      961 cgagttttga gaattagaga caatggggaa ctaatcatgg gggctagata tggaaagacg
     1021 aagatacgtg atcgtaatgt gggatattat gattcggaat gcagagggtt tataatggag
     1081 gactcgattt atattgacaa ataccaagaa agtctagctt tgttggatgt tggggatgat
     1141 gtccttagtg aggataggag gggggctgaa ggattaaacg aatga
//
LOCUS       XM_071831957             981 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g23880-like (LOC139841752), mRNA.
ACCESSION   XM_071831957
VERSION     XM_071831957.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..981
                     /gene="LOC139841752"
                     /note="F-box/kelch-repeat protein At3g23880-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139841752"
     CDS             1..981
                     /gene="LOC139841752"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g23880-like"
                     /protein_id="XP_071688058.1"
                     /db_xref="GeneID:139841752"
                     /translation="MYSVHHDSLALTVDPDTVIEFPFNCTPCPRYYLRIIGSIDGVVC
                     LGHKKCAYKEEKIILWNPSIRIKLPIFPPMMRIRRMLNYSVALGFGYDKVTDDYKVVR
                     LAYNYHYSPRPQVDIYGVKTAIWRAIPFPSDFLCIYFKGSPVYLNGCVYWIMYRWVSH
                     GWHIITQCSIMKFDVSAEMFEEIQLPEPLDDESPINLELELFNERLIVIKPMRLQLHS
                     RGASKYNMWALNNYEKQNSWEEICKISYGRIDLGRVLRIRDNGELLMGARYRKTKIRD
                     RNVGYYDSECRGFIMEDSIYIDKYQESLALLDVGDDVLSEDRRGAEGLNE"
     misc_feature    106..849
                     /gene="LOC139841752"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgtacagtg tgcatcatga cagtctagct ttgactgttg atccagatac tgttattgaa
       61 tttcctttca attgcacccc ttgccccaga tactatttga ggataattgg gagtatcgat
      121 ggtgttgtat gccttggtca taaaaaatgc gcatacaaag aagaaaaaat cattctgtgg
      181 aatccatcaa ttcgaataaa actacctatt tttcctccta tgatgcgcat aagacgtatg
      241 ctgaactact ctgtagctct aggatttggg tacgataagg tcaccgatga ttataaggtt
      301 gtccgattgg cttacaatta tcactattcc cctagacctc aggttgacat atatggcgtg
      361 aaaactgcca tttggagggc aatcccattt ccttctgatt ttctttgcat ttatttcaag
      421 gggtcacccg tgtatttaaa cggttgcgtg tactggataa tgtatcgttg ggtgtctcac
      481 ggttggcaca taattacgca atgttcaatc atgaaatttg atgtgagtgc agaaatgttt
      541 gaagaaattc aattgcctga acctttagat gatgaatccc caataaactt agagcttgag
      601 ttatttaatg agcggttgat tgtgataaaa cctatgcgtc ttcagttgca ttcgagagga
      661 gcaagtaaat ataacatgtg ggctttgaac aattatgaga aacaaaactc ttgggaagaa
      721 atatgtaaaa tatcttatgg tagaatagat ttgggccgag ttttgagaat tagagacaat
      781 ggggaactac tcatgggggc tagatataga aagacgaaga tacgtgatcg caatgtggga
      841 tattatgatt cggaatgcag agggtttata atggaggact cgatttatat tgacaaatac
      901 caagaaagtc tagctttgtt ggatgttggg gatgatgtcc ttagtgagga taggaggggg
      961 gctgaaggat taaacgaatg a
//
LOCUS       XM_071831958             666 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable glutathione
            S-transferase (LOC139841753), mRNA.
ACCESSION   XM_071831958
VERSION     XM_071831958.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..666
                     /gene="LOC139841753"
                     /note="probable glutathione S-transferase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841753"
     CDS             1..666
                     /gene="LOC139841753"
                     /codon_start=1
                     /product="probable glutathione S-transferase"
                     /protein_id="XP_071688059.1"
                     /db_xref="GeneID:139841753"
                     /translation="MGEVKLFWTWSSPFAQRIVWALKLKDIDYELIYEDLENKSSLLL
                     EYNPIHKKVPVLIHNGTPICESLVIIEYIDETWNTSTHRLLPDDPLARSNARFWAKFN
                     DEQVMPSVLNIYVSEGIEQEKAKAPALENLNIVEKRLIGKKFFSGETLGFLDIVFGWI
                     ANHLEIVEETSGVKLLDEEKFPLISAWKDRFSDIPIVKENKPNRDMLITKYRYMRGYI
                     LSQ"
     misc_feature    10..231
                     /gene="LOC139841753"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     Region: GST_N_Tau; cd03058"
                     /db_xref="CDD:239356"
     misc_feature    order(34..36,40..42,115..117,154..159,193..198)
                     /gene="LOC139841753"
                     /note="GSH binding site (G-site) [chemical binding]; other
                     site"
                     /db_xref="CDD:239356"
     misc_feature    order(49..51,70..72,211..213)
                     /gene="LOC139841753"
                     /note="C-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239356"
     misc_feature    order(181..186,193..195,211..213,223..225)
                     /gene="LOC139841753"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:239356"
     misc_feature    265..615
                     /gene="LOC139841753"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; Region: GST_C_Tau; cd03185"
                     /db_xref="CDD:198294"
     misc_feature    order(268..270,274..276,286..288,310..312)
                     /gene="LOC139841753"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:198294"
     misc_feature    order(286..288,307..309,463..468,475..477,601..603)
                     /gene="LOC139841753"
                     /note="N-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:198294"
ORIGIN      
        1 atgggtgagg tgaagctttt ctggacatgg tcaagcccat ttgctcagag gattgtttgg
       61 gcactcaaac taaaagatat tgactatgag ctaatctatg aagatcttga aaacaagagt
      121 tctttgctac tagaatacaa ccctattcac aagaaagtgc ctgtgttgat tcacaatgga
      181 acaccaatat gtgaatcact tgtgattatt gagtacattg atgagacatg gaacacaagt
      241 actcatcgtc tcttacctga tgatccactt gccagatcca acgcacggtt ttgggctaag
      301 tttaatgatg agcaggtgat gccatcagta ctcaatattt atgtcagcga agggatagag
      361 caagaaaagg caaaggcccc tgccttagag aacctaaaca ttgttgaaaa acggctaatc
      421 ggaaagaaat tcttcagtgg cgaaacactt ggattcctag acatcgtgtt tggatggatc
      481 gcaaatcatc ttgaaatagt cgaagaaaca agtggtgtaa aactcttaga tgaagaaaag
      541 tttccactaa tttcggcatg gaaggataga ttttctgata tcccgatcgt taaagaaaac
      601 aagccaaatc gagatatgct gattaccaag taccggtaca tgcgcgggta catcttatcc
      661 caataa
//
LOCUS       XM_071831959            1317 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides aspartic proteinase
            CDR1-like (LOC139841754), mRNA.
ACCESSION   XM_071831959
VERSION     XM_071831959.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1317
                     /gene="LOC139841754"
                     /note="aspartic proteinase CDR1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 46
                     Proteins"
                     /db_xref="GeneID:139841754"
     CDS             1..1317
                     /gene="LOC139841754"
                     /codon_start=1
                     /product="aspartic proteinase CDR1-like"
                     /protein_id="XP_071688060.1"
                     /db_xref="GeneID:139841754"
                     /translation="MFSVKTFLINSSYILCLLTLVRSDSTRVSFTTELIHRDSPTSPF
                     YDPSLTHSLRVVATINRSFDRARLFNTMRSSSGVTSIYPNPEIANYLMKISIGTPPQQ
                     VIGVADTGSDIIWTQCEPCSYCYDQTLPIYRPNVSSTYNTTTCDSTTCMLVPTRSCFD
                     LDNTCLYLVVYGDLSFSSGELATETLTMNSASPNDSYAFKNVVFGCGHRNGGMFSDYQ
                     SGIIGLGRGPFSLITQMGPSINGKFSYCLVQMFSQVEKSSKMYFGDVANVSGDGVVST
                     PIFSGAPDTFYYLNLEGITVGNQRVEFYMTKPNSIEGNIIIDSGTSLTLIPESFYNEL
                     QLAVRRSMNNTQPISPDVENNLNLCYNTSEVKDLPFMVVHFNGADLELDPMNTFVRLS
                     NDSICLAFAPVDGVVIFGNLAQMNFLIGYDLNKNTVSFKRTDCTKL"
     misc_feature    40..1311
                     /gene="LOC139841754"
                     /note="aspartyl protease family protein; Provisional;
                     Region: PLN03146"
                     /db_xref="CDD:178691"
ORIGIN      
        1 atgttctctg ttaaaacgtt tttgataaac tcgtcgtaca tcttatgttt acttacactc
       61 gtacgatcag atagcactag ggtaagcttt acgacagaac tcattcatcg cgactcacca
      121 acatctcctt tttatgatcc ttcacttact cattcactac gagtggttgc taccataaac
      181 cgctcgtttg atcgtgctag gctttttaat acaatgcgtt cttcttcggg tgtaactagt
      241 atttatccaa atcccgaaat agctaattat cttatgaaga tatcaattgg tactccacct
      301 caacaagtta taggtgttgc tgatacagga agtgatatta tatggacaca atgtgaacca
      361 tgttcttatt gttacgatca aacgcttcct atttatagac ctaacgtttc gtcaacttat
      421 aacacaacaa cgtgtgattc aaccacgtgt atgttggttc caactagatc ttgcttcgat
      481 ttagacaaca cgtgtttgta tctagttgtg tatggagatt tatcgtttag ttctggtgag
      541 ctggcgactg aaacgcttac gatgaattct gctagtccga acgattcata cgcttttaaa
      601 aatgtggttt ttggttgtgg gcatagaaat ggtggaatgt ttagtgatta tcaaagtggg
      661 attattgggt taggaagggg gcctttttca ctcattaccc aaatgggacc ttctattaat
      721 ggaaagtttt cgtattgtct tgtgcaaatg ttttctcaag tggaaaaatc gagtaaaatg
      781 tattttggtg acgtggcaaa tgtttctgga gatggggtcg tttcgacccc aattttttca
      841 ggagcccccg acacgtttta ctacctaaat ctcgaaggca taacggttgg aaatcaacgt
      901 gttgaatttt acatgacaaa acctaattct attgagggta acataatcat cgattcagga
      961 acttcactaa cattgattcc tgaaagtttc tacaacgagt tacagctggc agttagacgt
     1021 tcgatgaata atacccaacc aattagcccg gatgtagaaa ataatttaaa cttgtgttac
     1081 aacacgtcag aagttaagga tcttccattt atggtggttc attttaatgg ggcggatttg
     1141 gagttggacc caatgaacac atttgttcga ttgagtaatg attcgatctg cttagcgttt
     1201 gcacctgtag atggtgttgt catctttggg aatttggcac agatgaactt tttaataggt
     1261 tatgatctga ataagaacac tgtttcattt aaacgtacag actgtaccaa gttataa
//
LOCUS       XM_071831960            1017 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AUGMIN subunit 7-like
            (LOC139841755), mRNA.
ACCESSION   XM_071831960
VERSION     XM_071831960.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1017
                     /gene="LOC139841755"
                     /note="AUGMIN subunit 7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841755"
     CDS             1..1017
                     /gene="LOC139841755"
                     /codon_start=1
                     /product="AUGMIN subunit 7-like"
                     /protein_id="XP_071688061.1"
                     /db_xref="GeneID:139841755"
                     /translation="MAAKQMEEIQRKLTLLSYPRANAPSQSLLFAGMERYSLLEWLFF
                     KLLGDKSPFSQQNLQGDAMVRDEETSRIQYLAEIAKFLGITTSIDTEAIQGRGSYEER
                     TEMLCLIVDLVEASIYADNPEWSVDEQVAKDIQLIDSIAEKQAQIFSDECKLFPADVQ
                     IQSIYPLPDISDLEKQLATQSSRLSSLQEMVDDLASKHSYNPDEDYAEVDMKLRAHLE
                     SFLDTARSFNTIYTKEIRPWTHMMEVPQLHGFGPAANRLLDAYKMLLKFLGNLRNLRD
                     SHAAVAVGSSETISGQPSSVARIISECESALTFLNHDLGILSASIARDEAKKTGSNMG
                     QNNL"
     misc_feature    16..972
                     /gene="LOC139841755"
                     /note="Plant nuclear matrix protein 1 (NMP1); Region:
                     Plant_NMP1; pfam06694"
                     /db_xref="CDD:369039"
ORIGIN      
        1 atggcagcaa agcaaatgga agaaatacaa aggaaattaa cattattatc ttaccctagg
       61 gcaaatgcac cttctcaatc tctacttttt gccggcatgg aacgttattc acttctcgaa
      121 tggctctttt tcaagttatt aggtgataaa tccccatttt ctcaacagaa tttgcaaggt
      181 gatgcaatgg ttcgagatga agaaacttca cggattcaat atttggcaga gattgcaaag
      241 tttcttggca taaccactag catagatacg gaagctattc aaggaagagg aagttatgag
      301 gaacgaactg agatgctttg tctgattgta gatcttgtcg aagctagcat atatgctgat
      361 aatcccgagt ggagtgttga tgaacaggta gcaaaggaca tacaactcat agattctatt
      421 gctgaaaaac aagctcaaat tttctcggat gaatgcaaac tgttcccggc tgatgtgcaa
      481 attcaatcca tatatccatt gccagacata tcagatttgg agaaacaact cgctactcaa
      541 tctagtagac tatcaagtct gcaagagatg gttgatgatt tagcatcaaa gcattcgtac
      601 aaccctgatg aggattatgc tgaggtggat atgaagctga gggcacatct agaatctttt
      661 ttagatactg caagatcctt caacacaatt tacaccaagg aaatacgacc ttggacacat
      721 atgatggagg taccacagtt gcatggcttt ggaccagctg caaaccggtt actagacgca
      781 tacaagatgc tcttgaagtt cttagggaac ttgagaaatc tacgtgactc acatgctgcg
      841 gtggccgttg gatcatctga aacaatatct ggtcaaccgt cttccgttgc aagaattata
      901 tccgagtgtg aatctgcttt gacattttta aatcatgatc ttggaatact ttcagcctct
      961 atagctcgtg atgaagcaaa gaaaacaggt tcaaatatgg gccaaaacaa tctgtag
//
LOCUS       XM_071831961             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841756), mRNA.
ACCESSION   XM_071831961
VERSION     XM_071831961.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139841756"
                     /note="uncharacterized LOC139841756; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841756"
     CDS             1..591
                     /gene="LOC139841756"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688062.1"
                     /db_xref="GeneID:139841756"
                     /translation="MDVIVFALKLWRHYLYGTHCVICTDHKSLQYIFSQKEMNMCQRR
                     WQELFKDYDLDRLKIAQLKALPDEHLKSEQMGKRKEELIDDSRRLKTYRERVWASVLG
                     GLRDLILNEAHKSRLSVHPGSTKIKCQTPSCWLEAGEKKFAGPKIVQQTAKKVAIALE
                     KLKAARDRQKMYADPRQRLVTFYIERMCVFKSVSVE"
     misc_feature    <10..165
                     /gene="LOC139841756"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggatgtaa tagtgtttgc attaaagttg tggagacatt atctttatgg tacgcactgt
       61 gtcatctgca ccgatcataa aagtttacag tatatctttt cacagaaaga gatgaatatg
      121 tgccagagac ggtggcaaga actatttaag gattacgact tggatcgatt aaagatagct
      181 caactcaaag cattaccaga tgaacatttg aaatctgaac aaatggggaa aagaaaagaa
      241 gaattgatag atgattctcg aagattaaag acttatcgtg aacgagtttg ggcgtcggta
      301 cttggtggat tgagagattt aatcttaaat gaagcacata aatcaagatt atctgtgcat
      361 cccggtagta caaaaataaa gtgtcaaact ccatcgtgtt ggttggaggc aggcgaaaag
      421 aagtttgcgg gtccgaaaat tgtgcagcag actgcgaaaa aagtggctat cgcacttgaa
      481 aagctgaaag ctgccagaga tcgacaaaag atgtatgcag atcctcgtca acgactagtt
      541 actttttaca ttgagagaat gtgtgtattt aaaagtgtca gtgtggaata a
//
LOCUS       XM_071831962            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841757), mRNA.
ACCESSION   XM_071831962
VERSION     XM_071831962.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139841757"
                     /note="uncharacterized LOC139841757; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841757"
     CDS             1..1116
                     /gene="LOC139841757"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688063.1"
                     /db_xref="GeneID:139841757"
                     /translation="MQRVTKSIALMDKVAKLDDPQCELLLLRACTGVSKLYFTLRTCP
                     PSILEAAQRAFDGALRSSLERIVTASGPGFGDWQWRLATLPFAFGGLGVYSAGDVSHY
                     AFLASRLQTAGLQTKLLRHAGNPSEVAAPILMKKLADVYFTKVTASAESTFSLSPRQS
                     ALWKSQQGVHTSAWLRAVPILGLGQTMNAKTYRCVLCYRLGVPLFSISTACSACSRVF
                     TGDIFGDHAVSCAGMVGIKHRHNIVRDSLVDVCYRSGISARKEVDIGLSGGNDRALRP
                     ADVLLYSWDCGRDVCVDLTGSSPLTQSGLSDFVPGRAVVEAARRKRVKYESCYQAIGY
                     ETVGRLTPSVGRLSVESIEDQLTPTLTVGRQSSLSID"
ORIGIN      
        1 atgcaaaggg tgactaagtc cattgcgctt atggataagg ttgctaagct tgatgatcct
       61 cagtgtgagt tgttgttgct tagggcatgt acgggagttt ctaaactcta ctttaccttg
      121 cgtacttgtc ctcctagtat attagaggcg gctcaacgcg ctttcgatgg agcccttcga
      181 tcttccttgg agcgtattgt tactgcttca gggcctgggt ttggtgattg gcagtggcgg
      241 cttgccacct tgccatttgc ttttggaggg cttggtgttt attcggcggg agatgttagt
      301 cattatgctt ttctggcttc tcggttacag actgctgggt tgcagaccaa gctcctacgt
      361 catgcgggta atccgagtga ggtcgctgcc ccaatactca tgaagaaatt ggcagatgtt
      421 tatttcacaa aggttaccgc ttctgcagaa tccacttttt cgttatctcc ccgacaatcg
      481 gccttatgga aatcacagca gggtgttcac acctctgctt ggctaagggc agtccctatt
      541 ttggggttgg gtcagacgat gaacgcaaag acttaccgat gtgtgttgtg ctaccggtta
      601 ggtgttccat tgttctctat ctcgacggca tgctctgcct gttcaagggt ttttactggg
      661 gatattttcg gggatcacgc ggtgtcttgt gctggtatgg tgggtattaa gcatcgacat
      721 aatattgttc gggattccct tgttgatgtt tgttatcgat ctgggatttc tgcgagaaag
      781 gaggttgaca ttgggttgtc tggagggaac gacagggccc tcagacctgc agatgtgtta
      841 ctttattcct gggattgtgg tcgcgatgtc tgtgttgact tgacagggtc ttctcctttg
      901 acacagtctg ggctttctga ctttgtccct ggacgtgctg tggttgaggc ggctcgtcgg
      961 aagcgggtca agtacgaatc ttgctatcag gcgattggtt atgagacagt tggtcgactg
     1021 actccgtcag tcggtcgact gtctgttgag tcgatcgaag atcaacttac accgaccttg
     1081 actgtcggtc gacagagttc actgtcgatc gactga
//
LOCUS       XM_071831963             915 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841759), mRNA.
ACCESSION   XM_071831963
VERSION     XM_071831963.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..915
                     /gene="LOC139841759"
                     /note="uncharacterized LOC139841759; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841759"
     CDS             1..915
                     /gene="LOC139841759"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688064.1"
                     /db_xref="GeneID:139841759"
                     /translation="MQSDDFSEMPIVISCKIADAGITIMKVHIDNGSSVDIVYEQCFI
                     QLSESIKANLQPTAVSLTGFVGESSLPILPLDIELADVNDEAFVRQARLDFYVTTICS
                     MSVMPICAAVNVKSAGQEFADDADNMEIINPAYPEQKIKVGHNVSADTRKQIVQLLVQ
                     YMDVFAWCENNMTGVPRHIAEHRLNVNPPLKPVVQKRRGMAPDRVKWLCDEVTKLVRA
                     GILREVQYQSWIANPVLVKKPDEQGIQANPKNIAAIENMTAPRTVKEVQSLIGKLSAL
                     MRFLSKAAERQLPFFKTLKGCLKQKSFV"
     misc_feature    37..315
                     /gene="LOC139841759"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(88..90,94..96,100..102,181..189)
                     /gene="LOC139841759"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    88..96
                     /gene="LOC139841759"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    88..90
                     /gene="LOC139841759"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(181..192,202..213)
                     /gene="LOC139841759"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgcagagcg atgatttctc cgaaatgccg atagtaatat catgcaaaat cgcagacgct
       61 ggaattacaa tcatgaaagt tcatattgat aatggcagca gcgttgatat tgtttacgag
      121 caatgtttca ttcaactgtc ggagagtatt aaagcaaacc tacagccaac tgcggtttcg
      181 ctaactggtt tcgtgggaga atcttcattg cctattttgc ctttagacat tgagttagct
      241 gatgtaaatg atgaagcttt cgtgcgccaa gcgcgtttag atttttatgt taccacaata
      301 tgttcaatga gcgtcatgcc catttgtgcg gctgttaacg taaaaagtgc aggacaagaa
      361 ttcgctgatg acgcagataa tatggaaatt attaatcctg catatcctga gcagaaaatt
      421 aaagtgggac acaatgttag tgcagacact agaaaacaaa ttgtacaatt acttgttcag
      481 tacatggatg ttttcgcttg gtgcgaaaat aatatgaccg gtgttccacg acatattgcg
      541 gaacacaggc tcaatgtaaa tccaccccta aaacctgtag tacaaaagcg aaggggtatg
      601 gccccagatc gcgtaaaatg gctgtgcgac gaggtaacaa aattggtgag ggctggaata
      661 ttgcgcgaag ttcaatacca atcatggatc gcgaatccag tgttggtgaa aaaacctgat
      721 gagcaaggta ttcaggctaa tccaaaaaat attgcggcta ttgaaaacat gactgcgcca
      781 agaacggtta aagaggtgca aagtttgata ggaaaactgt cagcgttaat gcgttttttg
      841 tctaaagctg ccgaaaggca gttgccgttt ttcaaaactc taaaaggttg tttgaagcaa
      901 aaaagttttg tttag
//
LOCUS       XM_071831965            3969 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841760), mRNA.
ACCESSION   XM_071831965
VERSION     XM_071831965.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3969
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3969
                     /gene="LOC139841760"
                     /note="uncharacterized LOC139841760; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841760"
     CDS             1..3969
                     /gene="LOC139841760"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688066.1"
                     /db_xref="GeneID:139841760"
                     /translation="MAPKRKGMSEEEVENKISQTITNLIPNIVAQAIDAMRKKGGETI
                     KHEEEDEYKEDKTVTGDAIHVWLGRFQKQRPLSFSTASTPVEAENWITHIEKIYRVLG
                     CEERFWVPLAVYKLEGDAQRWWIALRQAKGESVIRKYANIKQGNDKSINDFTKRFLRL
                     VGLIGAAAGSAKDQARKYKWAVHGRYRSKMINLICFDVAEAADYALNLEMERAEYLAT
                     KNDDGKNKRVKIAQPLRSVPAPIIKQGQQSGNQGYRSNNWNNRGNQQRIDNGPNNNKR
                     GQLQVYRPQGQQRGNGSGGVNANAPCGTCGKNHPGRVCYRSAGSCFACGEVGHLAKDC
                     KNPIPGFVPRVPLPGPGGRVFAMTAAQAADAIGTITGHVFVHHRALFVLFDSGSTHSI
                     VSVKSSKYLKVSPTWLSTPFTISTPMGSIESIDRVFQNCRLEFNDCMFSANLFPMTMH
                     DFDIILGMDWLSRHHANIDCYSKRIFFGNHSIPDCVFNGDLPVKSIKVISALKAQKLI
                     SHGCVGYLASIQNLSIESPSLENIDVVREFPDVFPDELQGFPPVREVEFSIDLILGSQ
                     PISKAPYRMAPLELQELKEQLQDLIDCGFIRPNLMNRVFHEYLDKFVIVFIDDILVFS
                     KSKEEHENHLRVVLETLRSKKLFAKFSKCVFWLQRVAFMGHVVSAGGIMMDPVKVEAI
                     TNWLRPTSVVEVRSFLGLAGYYRRFVEGFSTIALPLTKLLRKGENFVWTDERQKSFDE
                     LKKRLVSAPILALPSGSGGFQIYSDASKHGLGCVLMQHYLYRETCDIFTDHKSLKYIF
                     TQKEINMRQRRWLELLKDYDANIHYHPGKANVVADTLSRKSFGSISCLVTHIREFERL
                     DMGLSKRGASRMLANLKFESDLITRIKEAQLDDGDLWTVFQNLEEGKVKEFREDDDGV
                     IWCGNRLCVPNDDAIREALWSEAHSSPFSIHPGLTKMYQDLKQHFWWSGMKKDVARYV
                     GKCLTCQQVKIEHQRASGLLQPLDIPVWKWDDISMVFVCGLPKTVKRNDAIWVVIDRL
                     TKSAHFLPIRMDYSVSKLSELFQQEILRLHGVPSSIVSDRDPQFTSRFWKGLQKAWGT
                     RLKLSTAFHPQTDGQSERTIQILEDMLRAYALDWKGNWDEYLCLVEFAYNNSWQASIR
                     MAPFEMLYGRKCRAPVCWNEAGEKLIEGPELVRVTNEKVSPWKGVRRFGLKGKLSPRY
                     ISPFEILDRVGEVSYRLALPPQLSHVHNVFHVSQLRGYNYHPLHVVQYPFSEIRADLS
                     YIEEPEAIIEREQRVTRKSSNPFVKVQWKNHSASEATWELEETMQAEHPHLFANWCVS
                     IL"
     misc_feature    898..>1032
                     /gene="LOC139841760"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    1054..1437
                     /gene="LOC139841760"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1153..1155,1159..1161,1165..1167,1240..1248,
                     1363..1365)
                     /gene="LOC139841760"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1153..1161
                     /gene="LOC139841760"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1153..1155
                     /gene="LOC139841760"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1240..1251,1261..1272)
                     /gene="LOC139841760"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    <1795..2001
                     /gene="LOC139841760"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    2284..2514
                     /gene="LOC139841760"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty3; cd09274"
                     /db_xref="CDD:260006"
     misc_feature    2773..2946
                     /gene="LOC139841760"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    2995..3294
                     /gene="LOC139841760"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
     misc_feature    3796..3951
                     /gene="LOC139841760"
                     /note="Chromo (CHRromatin organization MOdifier) domain;
                     Region: Chromo; pfam00385"
                     /db_xref="CDD:459793"
ORIGIN      
        1 atggcaccga aaagaaaagg aatgtctgag gaagaagtag aaaacaagat tagccaaact
       61 atcacgaatt tgatacccaa cattgtagct caagctattg acgcgatgcg taagaaaggt
      121 ggtgagacta ttaagcatga agaagaggat gaatataagg aagataaaac tgtaacggga
      181 gatgctattc atgtttggct aggacggttt caaaaacaac gtcctttgtc attcagcact
      241 gctagtactc ctgttgaagc tgagaattgg atcactcaca ttgagaagat ttaccgagtg
      301 cttggttgtg aagagagatt ttgggttcca ttggctgttt ataaactaga gggggatgct
      361 cagcgttggt ggatcgcttt gagacaagcg aaaggggagt ctgtgattcg gaagtatgcg
      421 aatattaagc aagggaatga taagtctatt aatgatttca ctaagaggtt tttgagactt
      481 gtgggtttga ttggggctgc tgcggggtct gctaaggacc aagcccgtaa gtataaatgg
      541 gctgttcatg ggcgctaccg ctctaaaatg attaatctga tatgtttcga tgtcgctgag
      601 gcagccgatt atgctctgaa tttggagatg gagcgagccg agtatttggc tactaaaaat
      661 gatgatggta agaacaagag ggttaagatt gcacaaccac tacgatctgt gcctgcaccg
      721 attattaaac agggtcaaca atctgggaac caagggtatc gtagtaataa ttggaataat
      781 agaggaaatc agcaaaggat tgacaacggg ccaaataata ataaacgtgg tcaactacaa
      841 gtgtaccgtc cccaagggca gcaaaggggt aatggaagtg gtggtgttaa tgccaatgca
      901 ccatgtggga cttgtggaaa gaatcatccg ggaagagttt gttatcgtag tgcgggttca
      961 tgttttgctt gtggagaggt tggtcactta gctaaggatt gcaagaatcc tatacctggg
     1021 tttgttccaa gggttcctct gccaggtcct ggtggacgcg tctttgccat gactgctgct
     1081 caggctgctg acgcgatagg tactattact ggtcatgtat ttgtacatca tcgtgccctc
     1141 ttcgttctgt ttgattctgg ctctacgcac tccattgtgt ctgttaagag ctcgaaatat
     1201 ttgaaagtgt ctccaacttg gttgtctact ccatttacga tctccacccc aatgggtagt
     1261 attgaaagta tagatcgtgt atttcaaaat tgccgtttgg aattcaatga ctgcatgttt
     1321 tccgcaaatc tctttcctat gaccatgcat gactttgaca ttattcttgg catggattgg
     1381 ttatctcgcc atcacgcgaa tatcgattgt tattctaaga ggattttttt tggaaatcat
     1441 tctatacccg attgtgtctt taatggtgat cttcccgtaa aatctattaa ggttatctca
     1501 gcgcttaagg cgcaaaagct catttcacat ggttgtgttg gttatttagc ttcgattcag
     1561 aatttatcta tcgagagccc ttcgcttgaa aatatcgatg ttgttcgaga gtttcccgat
     1621 gtatttcctg atgaattaca gggttttcct ccagttcgtg aagttgaatt ttcgattgat
     1681 ttgattctgg gttcccaacc gatatcaaaa gctccttatc gaatggcacc actcgagtta
     1741 caagaactca aggagcaatt gcaagacttg atagattgtg gttttattcg gccaaatcta
     1801 atgaaccgtg tgttccatga gtatttggat aagtttgtga tcgtattcat tgatgatatc
     1861 ttggtattct caaagagtaa agaagagcat gagaatcatc ttcgtgttgt acttgaaacc
     1921 ctccgaagta agaaattgtt tgcgaagttc tctaaatgtg tattctggtt gcaaagagtt
     1981 gcctttatgg gtcatgttgt atcggctggg ggtataatga tggatccggt gaaagttgag
     2041 gctattacaa attggttaag acctacttct gttgttgagg ttcgaagttt tcttggttta
     2101 gctggttatt atcgaagatt tgttgagggt ttttcaacga ttgctttgcc acttaccaag
     2161 ttgttgagga aaggggaaaa ttttgtgtgg accgatgaac gacaaaaaag tttcgatgag
     2221 ttaaagaaaa gacttgtatc agctcctatt cttgcattgc cgtcaggaag tggaggtttt
     2281 caaatctata gtgatgcttc taagcatggt ttgggttgtg ttttgatgca gcattatctt
     2341 tatagagaaa cttgtgatat tttcaccgat cacaagagtc tcaaatacat attcacgcaa
     2401 aaagagataa atatgagaca acgaaggtgg ctcgagttat tgaaggatta tgatgcaaac
     2461 attcattacc atcctggaaa agcgaatgtg gtagccgaca cattgagtag aaagtcattt
     2521 ggtagtatct catgtttggt tactcacatt cgagaatttg aaagacttga tatgggattg
     2581 agtaaaagag gagcatcgag gatgttggca aatctaaaat tcgagtctga tttaattact
     2641 agaataaaag aggctcaatt ggatgatggc gatttgtgga cagtgtttca aaatttggaa
     2701 gagggtaaag tgaaagagtt cagagaagat gatgatgggg ttatttggtg tgggaatcga
     2761 ttatgtgttc ctaatgatga tgctattcgt gaggctctgt ggtctgaggc tcacagctca
     2821 cctttttcta tacatcctgg tttgaccaaa atgtatcagg atttaaagca gcacttttgg
     2881 tggagtggta tgaagaaaga cgttgctaga tatgttggga agtgccttac ttgtcaacaa
     2941 gtaaagatcg agcaccaacg tgctagtggt ttgttgcagc cattggacat tcccgtgtgg
     3001 aagtgggatg atatctcaat ggttttcgta tgtggtttac cgaagactgt gaaaaggaat
     3061 gatgctattt gggtggtgat tgatagatta accaaatcgg ctcatttctt gcctattcgc
     3121 atggattatt cggtaagtaa gctatcagag ctttttcagc aggaaatttt gagattacat
     3181 ggggttcctt catccatcgt atccgatcgt gatcctcagt ttacatctag attttggaag
     3241 gggttacaaa aagcttgggg tacgcgattg aagcttagta ctgcttttca tccacaaact
     3301 gatggacagt ctgagcgtac gatacagatc ttggaagata tgcttcgagc ttatgcccta
     3361 gattggaagg gaaattggga tgagtactta tgtttggtgg agtttgccta taataatagt
     3421 tggcaggcta gtatccgtat ggcgccattt gagatgctct atggtcgaaa gtgtagagcg
     3481 ccagtttgtt ggaatgaagc gggtgaaaaa ttgattgaag gacctgagtt ggttagagtg
     3541 actaatgaaa aggtgtcacc ttggaagggt gtacggcgtt ttggtttgaa aggaaagctc
     3601 agtcctcgat atattagccc gtttgagata ttggatcgag ttggtgaagt atcttatcgt
     3661 ttagcattac cgccgcagtt atctcatgtt cataatgtat ttcacgtatc tcagttgagg
     3721 ggttacaact atcatccatt gcatgtggtg caatatcctt tttctgaaat tcgagctgat
     3781 ctttcttata tcgaggagcc cgaagctatt atagaacgcg agcagagagt aactcgtaaa
     3841 agctccaacc ctttcgttaa ggttcaatgg aagaatcatt ctgctagtga ggccacttgg
     3901 gaactcgagg aaaccatgca ggccgagcac cctcatttgt ttgctaattg gtgcgtttcg
     3961 attctataa
//
LOCUS       XM_071831966            1236 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841761), mRNA.
ACCESSION   XM_071831966
VERSION     XM_071831966.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1236
                     /gene="LOC139841761"
                     /note="uncharacterized LOC139841761; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139841761"
     CDS             1..1236
                     /gene="LOC139841761"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688067.1"
                     /db_xref="GeneID:139841761"
                     /translation="MENSTCGIKQQTHLALLIQEVRLIIWDKAPMTQRFTFEALDKTL
                     RDILGAKDDRNRSKIFGGMPVLLGGDFRQILPVIPKGKRQEIVHACINRSDLWKHCNL
                     HTLSRIMWVNEYTPDGHLDTRKQNFNKWVLDIGEGKVPAITKDGEDEPTWIKIPEEFI
                     VSSKKPPIETIVDTIFPDFPVRQEDEDYLRERAILTPRNDDADEINKHMFKKLQGATM
                     TYKSSDEICKGSTDNMEQQQTYPVEYLNTLNFPDVPPHKLKLKLGQPVMLLRNLCPSA
                     GLCNGTRLILTNFQKFVLQARIITGSHIGKSVIIPRIVLTSAQTKWPFVMQRIQFPVK
                     PCYAMTINKSQGQSLKYVDLYLPKPVFSHGQLYVALSRVTDPAGLKIVMINDSDERLK
                     GHTRNVVYRETFFNLKHDS"
     misc_feature    <4..867
                     /gene="LOC139841761"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <1009..1137
                     /gene="LOC139841761"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    1036..1038
                     /gene="LOC139841761"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggaaaaca gcacatgcgg aataaaacaa caaacacact tggcattgct tattcaagaa
       61 gttcgtttaa taatttggga taaggcacca atgacacaaa ggttcacttt cgaggcccta
      121 gataaaactt tgcgagacat tttaggggcg aaggatgaca gaaacagatc aaagattttc
      181 ggaggtatgc ctgtcttact agggggcgac tttagacaaa tacttccagt cataccaaaa
      241 ggcaaaagac aagaaatagt tcatgcatgc attaacaggt ccgacttatg gaaacattgt
      301 aatctgcaca cactatcccg cattatgtgg gtaaatgaat acactccaga tggacatctt
      361 gatacacgaa aacaaaactt caataaatgg gtactagata taggggaagg taaggttcct
      421 gcaattacta aagatgggga ggatgagcca acatggataa aaattcccga agaattcatt
      481 gtatcgtcca aaaaaccccc gattgaaacg atcgttgaca caatatttcc agatttcccc
      541 gtgagacaag aagatgaaga ttacttacga gagagggcta ttttgacacc aagaaatgac
      601 gacgcagatg agattaataa acatatgttc aaaaaattac aaggagcaac aatgacatac
      661 aaaagctctg atgagatttg caagggatca accgacaaca tggaacaaca acaaacatat
      721 cccgtggaat acttaaatac attaaacttc ccagatgttc ctcctcacaa actaaagcta
      781 aaattaggtc aaccagttat gttgttacga aatctatgcc caagcgcagg gctgtgtaac
      841 ggaacacgtc tcatcctaac aaatttccaa aagtttgttc ttcaagcccg gattataaca
      901 ggctcacata taggaaaatc agtcatcatt ccacggattg ttctaacgtc ggcccaaaca
      961 aaatggccct ttgtgatgca acgaatccaa ttcccagtca agccctgtta tgcaatgaca
     1021 ataaacaaaa gccagggaca atctttaaaa tatgtcgatc tttacctacc gaaaccagtt
     1081 tttagccacg gtcaactata cgttgcccta tcacgagtaa ccgatccagc tggtttaaaa
     1141 atagtcatga taaatgatag cgacgaacgt ttaaagggtc acacacgaaa tgtagtgtac
     1201 agggaaactt tcttcaactt gaaacatgat tcatag
//
LOCUS       XM_071831967            2364 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841762), mRNA.
ACCESSION   XM_071831967
VERSION     XM_071831967.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2364
                     /gene="LOC139841762"
                     /note="uncharacterized LOC139841762; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139841762"
     CDS             1..2364
                     /gene="LOC139841762"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688068.1"
                     /db_xref="GeneID:139841762"
                     /translation="MWYDERNNKPKNTSRPSFSMCCQNGKVLLPQLMPSPPLLQTLLN
                     YNDSTSYKFREQIRIYNSMFCFTSFGAKIDHSVNRGRGPYTFRISGQTYHKIGSLIPE
                     AAGPPKYAQLYFYDTQNEARNRMSTFLCHDSKETVDETLTRNLINMLDEYSAVAKAFR
                     MARDWSSNNPTLDCELHLVAKITSSRQYNAPNVGEIAALVTSDFGHCNSSGDIIVQKK
                     ELCPEKNIHQLYMALQYPLLFPYGETGYHEAIPYNNNSGKRQTARGYVTIREYYCYRI
                     QHHENEGKTLLRGGRLFQKFLVDAYTSVEEQRLQWVRHHQNELRTDLYNNVCDAVTRG
                     DTSAASIGKRIILPASHTGSPRYMVQNYQDAMALCREFDNPDLFITFTSNPKWPEIDE
                     MLSYIDGQKAPDRPEIVARVFKQKLDALTNDIMKEHIFGTCQAGLYIIEFQKRGLLHV
                     HMLIWLTRDYKCKTPADIDDLISAEIPSQIHDPEGFKAVIEYMLHRPCGGAHMDTPCI
                     IDRKCSKHFPKPYYAETTIDEDGYANYRHHNNGVKFHKNNTNLDNSFVVPYNRYLLLK
                     YNAHINVEWCNRSRAIKYLFKYLNKGPDRATIVIQENMIPNENSTVQTVIDVDEIKNY
                     LDCRYLSPCEAVWRLFSFDIHYSRPSVIKLSYHLPNQQSVTLRDSQQLPPLLHRESIK
                     ETMFTKWFELNKQDEHARSLTYTKLPKDYVWNQDAKIWTRRKLRSCIGRIVYSNPASG
                     ERYYLRMLLNIVKGHRSFEEIRTVDGTLYPTFKYACFTHGLLNDDKE"
     misc_feature    814..1362
                     /gene="LOC139841762"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgtggtatg acgagcggaa taacaagcca aaaaatactt ccagaccgtc cttctcgatg
       61 tgttgtcaga atggaaaagt gttactccca cagctcatgc cgtctcctcc gttgttgcaa
      121 acattgctta attacaatga ttccacatca tataaattcc gagaacaaat acgcatatat
      181 aacagcatgt tttgtttcac atcttttggg gctaaaatag accattctgt taaccgtggc
      241 cgaggtccat atacatttag gataagcggg caaacctatc ataaaattgg ttcacttata
      301 ccagaggctg cagggccacc aaaatatgca caactctact tttatgatac acagaacgaa
      361 gcaagaaatc gtatgtctac tttcttatgc catgattcta aagagacagt tgatgaaacc
      421 ctaaccagga atctcattaa catgctagat gagtacagtg ccgtagcaaa ggcatttcgt
      481 atggcaaggg attggtcaag taataaccca acattagatt gtgaactaca tttagttgct
      541 aagattacca gctcacgaca atataatgca cccaatgttg gtgaaatagc tgcgttagtc
      601 actagcgact ttggccactg caattcttca ggagatatca ttgtgcaaaa aaaagaattg
      661 tgccccgaaa agaatataca tcaactttat atggcgttgc aatacccttt actatttcca
      721 tatggtgaaa ccggatatca cgaagcgata ccatataata ataatagcgg gaaaaggcag
      781 actgccagag gttacgtcac aatacgagag tactactgct atagaattca gcatcatgaa
      841 aatgagggca aaactctcct aagaggtggt cgcttattcc aaaaattctt ggtcgacgca
      901 tatacatctg ttgaagaaca aagattgcag tgggtaagac atcaccaaaa tgagttgcga
      961 accgacctat acaataatgt ttgtgatgct gttacaaggg gcgacacgtc agcagcatca
     1021 atcggaaaga gaattatttt gccagcttct catacaggga gtccacgata tatggtccaa
     1081 aattatcaag atgcaatggc tttatgtcgg gaatttgata atcctgattt attcatcacc
     1141 ttcacttcta acccaaaatg gcccgaaatt gatgaaatgc tctcctatat cgacggtcaa
     1201 aaggcaccag atcgccctga gattgtcgcc cgagtattca aacagaaact agatgctctt
     1261 acaaatgata tcatgaaaga acacatattt ggaacatgtc aagcaggcct ctacattatc
     1321 gaattccaaa agcgcggatt acttcatgta catatgttaa tatggttgac acgtgattac
     1381 aagtgcaaga caccagccga catcgatgac ctcatatcag cagagatacc ctctcaaata
     1441 cacgatcctg aagggtttaa agcagtcatt gaatacatgt tacacagacc ttgcggtggt
     1501 gcgcatatgg atactccttg cattattgat aggaaatgtt caaaacactt tcctaaacca
     1561 tattatgcag aaaccactat tgacgaagac gggtatgcca attataggca tcacaacaac
     1621 ggagtcaaat ttcacaagaa caacactaac cttgataata gttttgttgt cccctacaac
     1681 agatatttgt tgctcaagta caacgcccat attaatgtcg aatggtgcaa tagatcacgt
     1741 gcaatcaagt acttattcaa atacttaaac aaaggtccgg atcgagcaac aatagtcata
     1801 caagaaaaca tgatccccaa cgaaaactcc acagtccaaa ccgttattga cgttgacgaa
     1861 attaagaatt atttggattg tcgatattta tcaccgtgtg aggccgtctg gagattgttt
     1921 tcgtttgaca tccattattc aagaccatcg gttatcaaat tgtcatacca tttacctaat
     1981 caacaatcag taacattgcg cgattcccaa caacttcctc cccttctaca cagagagagc
     2041 attaaagaga caatgttcac caagtggttt gaacttaaca aacaggatga acatgcgcgc
     2101 tccctaactt acacgaaatt gcccaaagat tatgtgtgga accaagacgc aaaaatatgg
     2161 acccggagaa aactaagatc atgcatcgga cgtattgtct attcaaatcc tgcatcaggt
     2221 gaacgttact acctgcggat gttgttgaac atagttaaag gtcaccgttc ttttgaagaa
     2281 attcgaactg tagatggtac attatacccc acgtttaaat atgcatgctt tacacatggt
     2341 ttattgaacg atgataaaga atag
//
LOCUS       XM_071831968            1812 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841763), mRNA.
ACCESSION   XM_071831968
VERSION     XM_071831968.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1812
                     /gene="LOC139841763"
                     /note="uncharacterized LOC139841763; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139841763"
     CDS             1..1812
                     /gene="LOC139841763"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688069.1"
                     /db_xref="GeneID:139841763"
                     /translation="MAHFGGHEGGKLSADIVVKLIEMLDTHNELVKLFRTARDKLLDN
                     DVPPFRIRLFSISGLRQYDLPTSQSIGAIAFDSGPKSIGDYDILIEQRGGFPQRVNEL
                     HPRYMSLQYPLAFVYGEQGFDPSMTLIDRSTNNRRKRKKVTMNRYYSYQLHSRMGLYD
                     LLLRTGRLFQQYVVTAYCSIELSRIDYIRNKQQDIRNDYLAGIYDGINRGDKNGLDIG
                     SRLILPASFTGGPRYMYSHYLNALAICQAHGNPKFFIMFTCNSKWLEIQYFLSPFPHL
                     TPSDRPDIVVRIFQQKLKQFISLIKEDEPFGNVKAVLYTVEFQKRGLPHCHTLIWKDL
                     PLANLSPNDIDRYISAEIPDPHIDPWGYKVVSDLMIHGPCGLDKLDAPSSELFYLRML
                     LCHQHGCTSFLDIKSVNGRICRSYRTACEMLGLLGNDREWDIALQEAIVSGTSSQIRN
                     RFSNILMYCDVINPAKLFKTHWKSMSDDIPLKIASYFGIEKLHINDPEMHSYVLYELE
                     ILLFIYGHGGIGKTFLWKSIITSIRSQGKIVLAVASSSIASLLLPLDQTTHSRFKIPI
                     VLTDESMCNIKKKTHLSSLLLQTSLIVWDEALMNDRR"
     misc_feature    484..990
                     /gene="LOC139841763"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    1528..>1809
                     /gene="LOC139841763"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    1549..1569
                     /gene="LOC139841763"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atggctcatt ttgggggaca tgaaggtgga aagttatcag ctgatatagt tgtaaaattg
       61 atagaaatgc ttgacacaca caatgaatta gtgaaattgt ttagaactgc gagagataaa
      121 ttattagaca atgacgttcc accatttcgt atcagattat ttagcatttc cgggttgcgt
      181 caatatgatc taccaacatc acagtcaatc ggcgctatag catttgatag tgggccgaaa
      241 agtattggtg attatgatat tttaattgag caaagaggtg gatttcctca aagggtaaac
      301 gaacttcatc cacgctatat gtctcttcaa tatccactgg cttttgtcta tggcgaacaa
      361 ggtttcgatc cgtcaatgac tctaatagat cgctctacaa acaatagaag aaaaaggaaa
      421 aaagttacca tgaataggta ctatagttat caactacata gtagaatggg cctttatgat
      481 ttattgctta gaacaggaag gttgtttcag caatatgtgg ttacagcata ctgcagtata
      541 gaattaagta gaatagatta tataagaaat aagcagcagg atataagaaa tgattactta
      601 gctggtatat atgatggtat taacagaggg gataaaaatg gattagatat tggttctaga
      661 ttgatacttc ctgcatcatt tacaggtggt ccaagatata tgtatagcca ttatttgaac
      721 gcgctagcta tatgtcaagc tcatggaaat ccaaaatttt tcatcatgtt cacctgcaat
      781 tcaaaatggc tagagatcca atattttttg tctccttttc cacatttaac accaagtgat
      841 cggcctgata ttgttgttcg aatatttcag caaaagctta aacaatttat ttcacttatt
      901 aaagaagatg aaccttttgg caacgtaaaa gccgttcttt acacagttga atttcaaaaa
      961 agaggccttc ctcattgcca tacactaata tggaaagatt taccattggc gaatctttct
     1021 ccaaatgata ttgacaggta catatctgcc gaaatacctg atccacatat tgatccttgg
     1081 ggttataaag ttgtatcaga cttgatgatt catggtccat gtggcctaga caaactagat
     1141 gcaccatcta gcgagctatt ctatttaagg atgttattat gtcatcaaca cggttgtact
     1201 tcattcctcg atataaaaag cgtaaatggc agaatctgta gaagctatag aactgcgtgt
     1261 gaaatgttag gtttgttggg taatgaccgt gaatgggata ttgcccttca agaagctatc
     1321 gtttcaggta cgtcttcaca aatacgtaat cgattttcaa acatacttat gtattgtgat
     1381 gtcataaatc ctgcaaaact ctttaaaacc cattggaaat caatgtccga cgacattcca
     1441 cttaaaatag cttcctattt tggaattgaa aaattgcaca taaatgatcc agaaatgcat
     1501 tcgtatgttt tgtacgaatt agagatctta ttattcatat acggacatgg aggaataggt
     1561 aaaacatttc tttggaaatc aatcattaca tctatcagat cacaaggaaa aattgttctt
     1621 gcagtcgcct cctccagcat agcttctcta cttctacctt tagaccaaac aacacattca
     1681 cgctttaaaa ttcctattgt tttaactgac gagtctatgt gcaatataaa gaaaaaaaca
     1741 catctcagtt ctttgttgtt acaaactagc ctcattgtat gggacgaagc gcttatgaat
     1801 gaccgacgtt aa
//
LOCUS       XR_011757426             333 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841764), ncRNA.
ACCESSION   XR_011757426
VERSION     XR_011757426.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..333
                     /gene="LOC139841764"
                     /note="uncharacterized LOC139841764; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841764"
     ncRNA           1..333
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841764"
                     /product="uncharacterized lncRNA"
                     /db_xref="GeneID:139841764"
ORIGIN      
        1 atcatggact cacaagtaga ttcaaacaac ggaagttcag atgaatgaca caagaattgc
       61 aaagtatatc aatactatat taaataacac aagaactaca tctcttggaa tattggctga
      121 tcagcttcgc gaaaaaacat cgactacctt gaagtcaatg ctgacaacaa gactattcac
      181 actagcaaac cctggtcgaa ggttctaatg atgccctagt aatgattcga acaattgtgg
      241 attaattgga tgggtggatc cacctataac aaccctgctt tttccgtcac ttccgttaac
      301 tttctgttag ttatttaacg gcgattactt gac
//
LOCUS       XM_071831969             516 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841765), mRNA.
ACCESSION   XM_071831969
VERSION     XM_071831969.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..516
                     /gene="LOC139841765"
                     /note="uncharacterized LOC139841765; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841765"
     CDS             1..516
                     /gene="LOC139841765"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688070.1"
                     /db_xref="GeneID:139841765"
                     /translation="MGPRQTRWQEVMPLTPLTGRQFLTLGVSVDDLTEKGLQMVCRLD
                     LIGPTFTTLQKCTSAIRQLAYDNTPDMWDEYLQMSEQTSILCLDYFCMCIITLYKKEY
                     MRSPNAHDVARLHSAHEERHGFRGMLGIIDCMHWEWRNCPVVLKGQYTRGDHKKPTLM
                     LEAVASYDFWI"
     misc_feature    301..>513
                     /gene="LOC139841765"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgggcccgc gtcagactcg ctggcaggaa gtgatgcccc tgacgccatt aacggggcgt
       61 cagtttttga cgctgggggt gtcagtcgac gatttgactg aaaaagggct tcaaatggtg
      121 tgccggcttg atctgattgg gcctacattt actactttac aaaaatgtac gtcggctata
      181 cgtcaattgg cgtatgacaa cactcccgat atgtgggatg aatatttgca aatgagtgag
      241 caaacatcaa tactatgtct agattacttt tgtatgtgta ttattacatt gtacaaaaaa
      301 gaatacatgc gatctccgaa tgcacacgat gttgctagat tgcatagtgc tcacgaggag
      361 agacatgggt ttaggggtat gctcggtatt atagattgta tgcactggga gtggaggaat
      421 tgtcctgttg ttttaaaagg acaatacact aggggtgatc acaagaaacc gacccttatg
      481 cttgaagctg ttgcttctta tgacttttgg atttga
//
LOCUS       XM_071831970             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841766), mRNA.
ACCESSION   XM_071831970
VERSION     XM_071831970.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139841766"
                     /note="uncharacterized LOC139841766; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139841766"
     CDS             1..570
                     /gene="LOC139841766"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688071.1"
                     /db_xref="GeneID:139841766"
                     /translation="MAGSNNDINVLNQSPIFDKLKNGTFPSAPFEVNGHEYSKGYYLA
                     DGIYPDWATLVKGYSCPTEELTIKVTRFQASARKDVERAFGVLQGRFHIIRLASRSMS
                     VNRVRRVMECCLILHNMILEDNGFALSKWEERFTTEEMENGMKHIRNRGRDRDIIARE
                     IRDRDLHNQLTEDLVEHIWNLLPTFRNAN"
     misc_feature    <4..375
                     /gene="LOC139841766"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcgggtt ccaacaatga tatcaacgtt ttgaaccaat cacctatatt tgataaactt
       61 aagaacggaa catttccatc agcaccattt gaggtaaatg ggcatgaata tagcaaagga
      121 tattaccttg cggatggtat atatcccgat tgggcaactt tagttaaagg atattcatgc
      181 cctactgaag aactaacgat taaggttaca agatttcaag ctagtgcccg aaaggatgta
      241 gagagggcat ttggggttct tcaaggtcgt tttcatatta tacgcctagc ttcacgaagt
      301 atgagcgtta acagggtgcg aagagtgatg gaatgttgtc tcatattaca taacatgata
      361 cttgaagata acggctttgc actttctaaa tgggaagaaa gattcactac cgaagaaatg
      421 gaaaatggta tgaaacatat acgaaacaga ggacgagatc gagatatcat cgcaagagaa
      481 ataagggatc gagatttgca caaccaactc accgaggatt tagtcgagca catttggaac
      541 cttctaccga cttttcgcaa tgcgaattaa
//
LOCUS       XM_071831971             516 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841767), mRNA.
ACCESSION   XM_071831971
VERSION     XM_071831971.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..516
                     /gene="LOC139841767"
                     /note="uncharacterized LOC139841767; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841767"
     CDS             1..516
                     /gene="LOC139841767"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688072.1"
                     /db_xref="GeneID:139841767"
                     /translation="MGPRQTRWQEVMPLTPLTGRQFLTLGVSVDDLTEKGLQMVCRLD
                     LIGPTFTTLQKCTSAIRQLAYDNTPDMWDEYLQMSEQTSILCLDYFCMCIITLYKKEY
                     MRSPNAHDVARLHSAHEERHGFRGMLGIIDCMHWEWRNCPVVLKGQYTRGDHKKPTLM
                     LEAVASYDFWI"
     misc_feature    301..>513
                     /gene="LOC139841767"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgggcccgc gtcagactcg ctggcaggaa gtgatgcccc tgacgccatt aacggggcgt
       61 cagtttttga cgctgggggt gtcagtcgac gatttgactg aaaaagggct tcaaatggtg
      121 tgccggcttg atctgattgg gcctacattt actactttac aaaaatgtac gtcggctata
      181 cgtcaattgg cgtatgacaa cactcccgat atgtgggatg aatatttgca aatgagtgag
      241 caaacatcaa tactatgtct agattacttt tgtatgtgta ttattacatt gtacaaaaaa
      301 gaatacatgc gatctccgaa tgcacacgat gttgctagat tgcatagtgc tcacgaggag
      361 agacatgggt ttaggggtat gctcggtatt atagattgta tgcactggga gtggaggaat
      421 tgtcctgttg ttttaaaagg acaatacact aggggtgatc acaagaaacc gacccttatg
      481 cttgaagctg ttgcttctta tgacttttgg atttga
//
LOCUS       XM_071831972             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841768), mRNA.
ACCESSION   XM_071831972
VERSION     XM_071831972.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139841768"
                     /note="uncharacterized LOC139841768; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139841768"
     CDS             1..570
                     /gene="LOC139841768"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688073.1"
                     /db_xref="GeneID:139841768"
                     /translation="MAGSNNDINVLNQSPIFDKLKNGTFPSAPFEVNGHEYSKGYYLA
                     DGIYPDWATLVKGYSCPTEELTIKVTRFQASARKDVERAFGVLQGRFHIIRLASRSMS
                     VNRVRRVMECCLILHNMILEDNGFALSKWEERFTTEEMENGMKHIRNRGRDRDIIARE
                     IRDRDLHNQLTEDLVEHIWNLLPTFRNAN"
     misc_feature    <4..375
                     /gene="LOC139841768"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcgggtt ccaacaatga tatcaacgtt ttgaaccaat cacctatatt tgataaactt
       61 aagaacggaa catttccatc agcaccattt gaggtaaatg ggcatgaata tagcaaagga
      121 tattaccttg cggatggtat atatcccgat tgggcaactt tagttaaagg atattcatgc
      181 cctactgaag aactaacgat taaggttaca agatttcaag ctagtgcccg aaaggatgta
      241 gagagggcat ttggggttct tcaaggtcgt tttcatatta tacgcctagc ttcacgaagt
      301 atgagcgtta acagggtgcg aagagtgatg gaatgttgtc tcatattaca taacatgata
      361 cttgaagata acggctttgc actttctaaa tgggaagaaa gattcactac cgaagaaatg
      421 gaaaatggta tgaaacatat acgaaacaga ggacgagatc gagatatcat cgcaagagaa
      481 ataagggatc gagatttgca caaccaactc accgaggatt tagtcgagca catttggaac
      541 cttctaccga cttttcgcaa tgcgaattaa
//
LOCUS       XM_071831973            1017 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable transcriptional
            regulator SLK2 (LOC139841769), mRNA.
ACCESSION   XM_071831973
VERSION     XM_071831973.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1017
                     /gene="LOC139841769"
                     /note="probable transcriptional regulator SLK2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139841769"
     CDS             1..654
                     /gene="LOC139841769"
                     /codon_start=1
                     /product="probable transcriptional regulator SLK2"
                     /protein_id="XP_071688074.1"
                     /db_xref="GeneID:139841769"
                     /translation="MVFNVSIGFQNLQTKSSKPRSQTYALLLAHTVIITDDGHEVLTG
                     LSSKADDKNSDVNQLLQVAQKCQATITKSGSDGVSQQGLQTNSNMVVTAGRQLARSLE
                     LQSLNDLGFSKRYVRSLQISEVVNSMKDLMDFCRDTKAGPIEGLKDFLRQTRPVNNSL
                     NNNNDNNNQMCNRSGSTQAAALALSNYQNILMRQSSMNLNSQQEASSSYNNTNPNGY"
     misc_feature    <1..132
                     /gene="LOC139841769"
                     /note="A family including aminopeptidase P, aminopeptidase
                     M, and prolidase. Also known as metallopeptidase family
                     M24. This family of enzymes is able to cleave amido-,
                     imido- and amidino-containing bonds. Members exibit
                     relatively narrow substrate specificity...; Region:
                     APP_MetAP; cl00279"
                     /db_xref="CDD:469704"
     misc_feature    <169..441
                     /gene="LOC139841769"
                     /note="LIM-domain binding protein; Region: LIM_bind;
                     pfam01803"
                     /db_xref="CDD:426444"
ORIGIN      
        1 atggtgttta atgtttcaat cgggtttcaa aacttgcaga ctaagagtag taaaccaagg
       61 agtcaaactt atgcattatt gcttgctcat actgtgatta ttactgatga tggtcatgaa
      121 gtgttgactg gtttaagttc aaaagcggat gataagaatt cagatgttaa tcagttgtta
      181 caagtggcac aaaaatgtca agccactata actaaaagtg gttctgatgg ggtttcccaa
      241 caaggtttgc agacaaatag caatatggtt gtgaccgctg gccggcagct tgcgaggagc
      301 ttagagttac aatctttgaa tgatttggga ttttctaaaa gatatgttag gtccttacag
      361 atatctgaag tcgtcaatag catgaaagac ttgatggatt tctgccgaga cactaaagct
      421 ggccctatag aaggcttaaa agattttctt cggcaaacaa gacctgtaaa taattcattg
      481 aacaacaaca atgataacaa taatcaaatg tgtaaccgaa gtggttcaac gcaggctgct
      541 gcacttgcac tttcaaacta ccagaacata ttgatgagac aaagttccat gaatttaaat
      601 tcccaacaag aagcttcatc ttcttataat aacaccaatc caaacggata ctaatttcaa
      661 ggttcctcca atacggcagt tggtggcggc ggcggcagtt tcccacaacg gcctattttt
      721 catgttcaac aacaccacca acagtcacca tctcacaggg gcaatcaggc catgcaacaa
      781 cacatgattc aacaaatggt tcaagacatg agtaatggtg gtggtggcag accaaagcct
      841 tcggttttag gctttatgca agaatcgtgc agtcacattc tatgaattgt gtattgtatt
      901 atgtatctat tttcaatctc tatttgattg cttgtccatt tatgataaga attataagca
      961 atcacttaag aacatggtgt tagctgtttt ccattattat atttaagtct tgccttt
//
LOCUS       XM_071831974             632 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841770), mRNA.
ACCESSION   XM_071831974
VERSION     XM_071831974.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..632
                     /gene="LOC139841770"
                     /note="uncharacterized LOC139841770; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841770"
     CDS             72..368
                     /gene="LOC139841770"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688075.1"
                     /db_xref="GeneID:139841770"
                     /translation="MKKEDTVKLISAEGFEFVIDKNAAMVSQTIRNMLTSPGGFAETE
                     LGVVTFPEISATILEKICQYFYWSLQYASGKETEFHIEPELTLELMMAANYLHT"
     misc_feature    87..365
                     /gene="LOC139841770"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in Elongin-C
                     (EloC) and similar proteins; Region: BTB_POZ_EloC;
                     cd18321"
                     /db_xref="CDD:349630"
     misc_feature    order(87..89,108..131,231..239,246..248,255..260,267..272,
                     279..284,300..308,318..326,330..335)
                     /gene="LOC139841770"
                     /note="elongin B interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:349630"
     misc_feature    order(165..170,174..176,180..191,210..218,222..227,
                     342..344,351..356)
                     /gene="LOC139841770"
                     /note="cullin binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:349630"
     misc_feature    order(261..263,273..275,282..284,285..287,294..299,
                     303..308,312..314,318..320,327..332,336..344,348..353,
                     363..365)
                     /gene="LOC139841770"
                     /note="target protein binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:349630"
ORIGIN      
        1 cctcgttttg tatcaaaatt tagggcttac aaacaaaaaa caatcttcga gaaaaaaaat
       61 actccgtaat tatgaagaaa gaagacacag tgaaactaat tagtgcagaa ggatttgaat
      121 tcgtgatcga taagaatgcc gccatggttt ctcaaaccat tcgtaacatg ctcacttctc
      181 caggtggttt tgcggaaact gagctcggag tagtgacgtt tccggaaata agtgccacaa
      241 ttttagagaa aatttgccag tatttttatt ggtctcttca atatgcaagt gggaaggaga
      301 ctgaattcca catcgaacct gaactgacac tggaactgat gatggctgct aattatctcc
      361 acacttgact aatcttctcg ttcgcagcat cttgatcttg accatgctag atcaaggatg
      421 ctcgaggatc gtttgttggc gattgttaat atcagatgtt attaggagtt atgtccaatt
      481 ggtagatgta ttgatgctta tccatccaag caattttagg aaatgcatct atacaatata
      541 cttatcttgg ttatattatt tgtgtttcaa ctttctttgt gaatatctgt aatgttgaat
      601 aaaatattgt gtcaataaga tactccgtat ta
//
LOCUS       XM_071831975            1053 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841771), mRNA.
ACCESSION   XM_071831975
VERSION     XM_071831975.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1053
                     /gene="LOC139841771"
                     /note="uncharacterized LOC139841771; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841771"
     CDS             1..1053
                     /gene="LOC139841771"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688076.1"
                     /db_xref="GeneID:139841771"
                     /translation="MGDGLRREISEDSVGLREFGIRLVSLNVRGFEVGKQRKFGWVKG
                     ICSKEKPNFLAIQESKTHTRGKILLWDLSVFDATNEISCDFFNGVQGIWKPTGIEVTI
                     INVYGPHDDQSKGRMWDSLDKLLNDGEDAWILCGDFNEVRDVSERLNYEFIASRARRF
                     NEYIANNKLIEIPLGGRKFTRISDYGIKMSKLDRFLVSKKFHNLWGNLSAIALDRDRS
                     DHCPIILRDTVVDFEPKPFKIFDEWLVTEGVEKIIGDAWSKKVSGNRKDCNFRNKLKK
                     VKLVLKSWSQSVFHSLDDEIELFKTKAIEFELKAENGVFSDIERLEWLNARKMWFEKE
                     RIKTNMYKQKARVGGL"
     misc_feature    67..678
                     /gene="LOC139841771"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(79..81,172..174,316..318,409..411,415..417,577..579,
                     655..660)
                     /gene="LOC139841771"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(172..174,655..657)
                     /gene="LOC139841771"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(316..318,415..417,658..660)
                     /gene="LOC139841771"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgggtgatg gattgaggcg tgagatttca gaagatagtg ttggattaag agaatttggt
       61 attcgcctgg tgtctctaaa cgttcgtggg ttcgaggttg ggaaacaaag aaaatttggt
      121 tgggtaaagg gtatttgctc aaaagaaaaa ccaaatttct tggccattca agaatctaaa
      181 acacacacga gggggaaaat tctattgtgg gatttgagtg tttttgatgc tactaatgaa
      241 atatcgtgtg atttctttaa tggtgtgcaa ggtatttgga aacctacagg catcgaggtt
      301 acgataatca acgtttatgg cccccatgat gatcaaagta aagggagaat gtgggattcg
      361 ttagataaat tgttaaatga tggtgaagat gcgtggattt tatgtggcga cttcaacgaa
      421 gtcagagatg tttccgagag attgaactac gagttcattg ctagtagagc taggcgtttc
      481 aatgaatata tcgcaaataa taagctgatc gagatacctc ttgggggaag gaaatttacg
      541 cgtataagtg attacgggat caagatgagc aaattggata gatttcttgt gtcgaagaaa
      601 tttcataatc tctggggcaa tctgtctgct attgccttag acagagaccg ctcagatcac
      661 tgtccgatta tactaagaga taccgtcgta gactttgagc ccaagccctt taagattttc
      721 gacgaatggc ttgtaaccga aggggtagaa aaaataattg gtgatgcgtg gtctaaaaag
      781 gtatcaggta accgtaaaga ctgcaatttc aggaacaaat tgaaaaaggt gaagcttgtg
      841 ctcaaatcct ggagtcagtc ggtttttcac tccttagacg acgaaatcga acttttcaaa
      901 acaaaggcca ttgagtttga actaaaagct gaaaatgggg tgtttagtga tattgaaaga
      961 ttggagtggt taaatgctag aaaaatgtgg ttcgagaagg agaggatcaa aacaaacatg
     1021 tataaacaaa aggcgagagt cggtggattg tag
//
LOCUS       XM_071831976            2424 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139841773), mRNA.
ACCESSION   XM_071831976
VERSION     XM_071831976.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2424
                     /gene="LOC139841773"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841773"
     CDS             1..2424
                     /gene="LOC139841773"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071688077.1"
                     /db_xref="GeneID:139841773"
                     /translation="MKSVNYFEYILLFLPIGINIHHITLITNSNIQPQNFINQVRSIA
                     SVVPWSSPTQYQKHIIFDDITETIDSVTNGSEFENGKQNDENMDLESVKDDRDIDESV
                     IGMVFDSPDDAYTFYNRFAFMHGFGIRKQSTFRNKTTNEPYRKIYVCNKEGFKDISND
                     AVTKRRRESRTGCTAMIRISKNKVGKWVVDLFTNIHNHELSTPSKVMKHRSHGKTHRA
                     MASKSLMLDLSKNGLRPCQIKKVVNSMKDVDAPDVTSKQCADILAEERRKYRGKEFYG
                     VIKYFQEKASIDSKHYWVVDLFDDGSPKNIFWADGRSRDAYVNFGDVVVFDVTYMTNR
                     FRMPFSPFVGVNHHGQSILFGGALLENEKEETFVWLFQEFLKCMFNMYPTAIITDQDK
                     AIRNAIKKVFPNVRHRYCAWHINNHELEQLRPLKARYSDFQEMYKQWVKSQTTDEFET
                     RWKVIREKYNLESHYWLNDMYDQRTLWAKVYLKDCFFAGMTTSGRSESIHSFFDGYVT
                     SNTMLNEFVAQYDKAVESRRAAEEDEDFKTMNTKAVLSSVNLIEKKAGTRYTSKIFDV
                     FKKEWIQATNNLTHETLSKCSGEIQYKVGQVDIEKIYWRTVSIRFTDKLDVKCSCAKF
                     ETYGILCKHILYVLKKKHIETLPDHYILPRWTLDARYRVDNYNNRLADGETRVSALSL
                     WCVQSKCMKAIEQAKESPSIMKKLDTLLEKFLEENIIHKSSPQNDNPSRDSNAGCSQV
                     NMVNMMPQIAVRDPPAPVKTKGRPKSANRIKSSLEAPKKRTCSWCKGLGHYVTGCPIK
                     KGIDSAINK"
     misc_feature    187..>1986
                     /gene="LOC139841773"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgaaatccg tcaattactt cgaatatatt cttctttttc ttccaattgg aataaatatc
       61 catcacatta ctttgattac aaatagtaat attcaacccc aaaacttcat caatcaggtt
      121 cgttcaattg cttccgtagt tccatggtca tcaccaactc aataccagaa acacatcata
      181 tttgacgata taacggaaac tatagactct gtcactaatg gttctgaatt tgaaaatggg
      241 aaacaaaacg atgaaaacat ggatcttgag agtgtgaaag atgatagaga catagatgaa
      301 tctgttatag gaatggtttt tgatagccct gatgacgcat acacatttta taatcgtttt
      361 gcttttatgc atggttttgg aatacgtaaa cagtccacct ttagaaataa gacaacaaat
      421 gagccgtatc gaaaaatata tgtgtgcaac aaagaaggat ttaaggatat ttcaaatgat
      481 gctgttacaa aacgtcgtag ggaatcaagg actggttgta cagcaatgat tcggatatca
      541 aaaaataaag ttggaaagtg ggttgtggat ctttttacca atatacataa tcatgagcta
      601 agcactccga gcaaggtgat gaaacaccgt tctcatggaa agactcaccg cgcaatggct
      661 agtaaatctc ttatgttgga tcttagcaaa aatggtttga gaccttgtca aattaaaaaa
      721 gtggtaaatt ccatgaaaga tgtagacgca cctgatgtta cttcaaagca atgtgctgat
      781 atattggctg aagagcgaag aaaatataga ggtaaagagt tttatggcgt gataaaatat
      841 ttccaagaga aagcctctat agatagtaaa cattattggg ttgtagattt atttgatgat
      901 gggtctccaa aaaatatttt ttgggctgat gggaggtcac gagatgcata tgtaaatttt
      961 ggggacgttg tcgtgtttga tgtgacgtat atgacaaaca gatttagaat gccattttct
     1021 ccattcgttg gcgtcaatca tcacggccag tctatactat ttggaggagc gttactagag
     1081 aatgaaaagg aagaaacatt tgtttggcta tttcaagaat tcttaaagtg catgtttaac
     1141 atgtatccaa ctgcaataat tactgatcaa gataaagcga ttcgcaatgc cataaaaaaa
     1201 gtttttccaa atgtccgcca tcgatattgt gcctggcaca ttaataacca tgaattggaa
     1261 caacttcggc ctcttaaagc acgttatagt gattttcaag agatgtacaa acagtgggtt
     1321 aagagtcaaa caacagatga attcgaaact cgatggaaag ttatacgaga aaagtacaac
     1381 cttgaaagtc actactggtt aaatgatatg tatgaccaac gtaccctttg ggctaaagtc
     1441 tatttaaaag attgtttttt tgctgggatg acaacaagtg gaagaagtga gagtattcat
     1501 tccttctttg atggatatgt tacttccaat actatgttga atgaatttgt agctcaatat
     1561 gataaagccg tggagtctcg aagagctgct gaagaagatg aagattttaa aacaatgaac
     1621 acaaaggcag ttctttcttc tgttaatcta atagaaaaga aagcaggtac acgttataca
     1681 agcaagatct ttgatgtttt taaaaaagaa tggatacaag cgactaacaa tttaactcac
     1741 gagactttaa gtaagtgttc gggagagatc caatataaag ttggtcaagt tgatattgaa
     1801 aaaatatatt ggagaactgt gtccattcga tttacagata agttagatgt caaatgttct
     1861 tgtgccaagt ttgaaacata tggaatttta tgtaaacata ttctgtatgt tttgaagaag
     1921 aagcacattg aaactcttcc tgatcactat atcttgccaa ggtggacact tgatgctagg
     1981 tacagagtgg ataattataa caatagactt gcagatggtg aaactagagt tagcgcctta
     2041 agtttgtggt gtgttcaatc gaaatgtatg aaagcgattg aacaagcgaa agagtcaccc
     2101 tctatcatga agaaactaga tacccttttg gagaagtttt tagaagaaaa tattattcac
     2161 aaaagttctc cacaaaatga caatccatca agagattcca atgcaggttg ttcccaagta
     2221 aacatggtaa acatgatgcc tcaaatagca gtccgggatc ctccagcacc tgttaaaact
     2281 aagggtcgtc caaagagcgc aaatcgaatc aaatcttctc ttgaagcacc gaaaaaaaga
     2341 acatgttctt ggtgcaaagg tttgggtcac tatgttactg ggtgtccaat aaaaaagggt
     2401 atagattctg caatcaataa atga
//
LOCUS       XM_071831978             568 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 2-oxoglutarate-dependent
            dioxygenase 11-like (LOC139841774), mRNA.
ACCESSION   XM_071831978
VERSION     XM_071831978.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..568
                     /gene="LOC139841774"
                     /note="2-oxoglutarate-dependent dioxygenase 11-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139841774"
     CDS             53..568
                     /gene="LOC139841774"
                     /codon_start=1
                     /product="2-oxoglutarate-dependent dioxygenase 11-like"
                     /protein_id="XP_071688079.1"
                     /db_xref="GeneID:139841774"
                     /translation="MSTAASLTLKSSIPVPSVKELVSQPLDTVPHRYLRNIDADYPTA
                     TLFSGDSSLHVPVIDLIKLTDPQFQQSELQNLDNACKNWGIFQLVGHGVSHESIKSMD
                     GKIKEFFDRPPEEKKRYAQKPGSLEGYGQAFVISEDQKLEWCDMILLKAIPTDTRKLE
                     FWPEQSPHKFR"
     misc_feature    95..>565
                     /gene="LOC139841774"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein; Region: PLN02758"
                     /db_xref="CDD:215404"
ORIGIN      
        1 aaaaagggca gtatacaaaa ttccgacaac tttccggttt caatactata gaatgtcaac
       61 ggcggcgagt ttgactttaa aatcatcaat cccagtccca agtgtcaaag aactcgtatc
      121 tcagcctctc gacaccgtgc cccaccgcta cctccgaaac atcgacgccg actacccaac
      181 cgccaccctt ttctctggcg actcttcact tcatgtccct gtaatagatc tgatcaaact
      241 cactgaccct cagtttcaac aatctgaact tcaaaatctc gataatgctt gcaaaaattg
      301 gggcatcttt cagttagttg gtcatggagt ttctcacgaa tcgataaaaa gtatggatgg
      361 aaaaattaaa gagttttttg accggccccc tgaagaaaaa aaacggtatg cacaaaaacc
      421 tggaagctta gaaggttatg gtcaagcttt tgtgatatcc gaagaccaaa agcttgaatg
      481 gtgtgacatg atattactca aggctattcc taccgacacc cgaaaattag agttttggcc
      541 tgaacaatcg ccacataaat tccggtaa
//
LOCUS       XM_071831979            1008 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841775), mRNA.
ACCESSION   XM_071831979
VERSION     XM_071831979.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1008
                     /gene="LOC139841775"
                     /note="uncharacterized LOC139841775; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841775"
     CDS             1..1008
                     /gene="LOC139841775"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688080.1"
                     /db_xref="GeneID:139841775"
                     /translation="MSYHIWSVITRKQSLWVKWIHSYSLKQRSIWEVDIPATSSYSWR
                     KMLNLRHTIRPCIIHRIGSGEETSAWFDTWNDVDPLSEIITRRDIFRAGFSETSTVAD
                     LWDSSGWKWPAEWNQKYSLLNHISCVISSDQDEVLWRNSDGNLGKFSVNSAWDTIRKR
                     APQVNWHAIVWFTQAIPRHSFTVWLLMNEKLKTQDMLRTWDVHVSAPAPICLLCKTQM
                     DSHNHLFFECGFSNQVWDKLKQSIQFHIPSNEWKEIVGILLPVVHKRVTRVVVTKLVF
                     AASVYFMWQERNKRYFKSKARSVDQVSQIIISNVRLKLLSLKFKDSVHVRRMKKIWDI
                     H"
     misc_feature    442..702
                     /gene="LOC139841775"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtcgtacc atatttggag tgttataacg aggaaacaat ctctatgggt gaagtggatc
       61 cattcttaca gccttaaaca gcgaagcatt tgggaggttg atatcccagc cacttcaagc
      121 tatagttgga ggaaaatgct aaatttacga catactattc gtccgtgtat tatccatagg
      181 attggtagtg gcgaggaaac gtcagcttgg tttgacacat ggaatgatgt tgatcctctt
      241 tcagaaataa ttactcggag ggatatcttt cgcgcaggct tttctgagac atctactgtt
      301 gcagatttat gggactcttc aggctggaaa tggcctgctg aatggaatca aaaatattct
      361 ttgttgaatc atatatcatg tgttatttcc agcgatcaag atgaggtttt gtggcgaaat
      421 tcagatggaa atttgggtaa gttttctgta aactcagctt gggatacaat tcgaaaaaga
      481 gctcctcaag taaattggca tgcaattgtt tggtttacgc aagctattcc ccgtcattcg
      541 ttcacggttt ggttgttgat gaatgaaaaa ctcaagactc aagatatgct tagaacgtgg
      601 gacgtccatg tgtctgctcc tgccccgatt tgcttacttt gtaaaacgca gatggactcc
      661 cacaatcatt tgttttttga gtgtgggttt tcgaatcaag tttgggataa gttgaagcaa
      721 tcaattcagt ttcatattcc ctcaaatgag tggaaggaaa tcgttggtat tttgttaccg
      781 gttgttcata agagagttac tcgagtggta gtgacaaaat tggtgtttgc tgcttccgtt
      841 tattttatgt ggcaagagag gaacaagagg tacttcaaaa gcaaagctcg ttcggttgat
      901 caagtctcgc aaataattat ctcaaatgtc cgcctaaagc ttttgtcttt aaagtttaaa
      961 gactcggtcc atgtgaggag aatgaagaag atttgggata ttcattaa
//
LOCUS       XM_071831980            1047 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841776), mRNA.
ACCESSION   XM_071831980
VERSION     XM_071831980.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1047
                     /gene="LOC139841776"
                     /note="uncharacterized LOC139841776; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841776"
     CDS             1..1047
                     /gene="LOC139841776"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688081.1"
                     /db_xref="GeneID:139841776"
                     /translation="MEAMNRYNNTLYGYFLGKRVAFLVVQNYVMNVWRKYGIEKTMMN
                     ANGFFFFKFSTEKGMMDVLEIGPWIIRTIPILLNKWSPYVSLTKEDIPKVPVWVKMHD
                     VPMVGFNEDGLSLIASKIGKPMMLDSYTSTMCTNSWGRPNYARAMIELDAAKELNDTI
                     RVATPSSEGGVKFVDVVRVEYEWNSPRCSKCKVFGHRDSQCPKNVHKEVVQIKDLDGF
                     QPVSKHMSKAIVIDKNKFENKKKQADGFVVGKGKQKFIYRPVNKELSSKAGGAANAVS
                     TSKDPEPKNVSIDNPFDVLNTITEEDNNKNKDTEKVLIDEDTDLEVDEGEVNTTVLTN
                     AEGASTLVDTGLND"
     misc_feature    1..435
                     /gene="LOC139841776"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
ORIGIN      
        1 atggaagcta tgaaccgtta caataacaca ttgtacggtt attttcttgg taaacgagtg
       61 gcgttcctgg tagttcaaaa ctatgtaatg aatgtttgga ggaaatatgg aattgaaaaa
      121 acaatgatga atgctaatgg tttctttttc ttcaaatttt caacggaaaa ggggatgatg
      181 gatgttttgg aaattggccc ttggattatt cgtacaattc ctattttgct aaataaatgg
      241 tctccgtatg tttctttaac gaaagaggat attccaaagg ttccagtgtg ggtcaagatg
      301 cacgatgttc caatggtagg ttttaatgag gatggtttga gccttatagc ttcgaagata
      361 ggtaaaccta tgatgttaga ctcatataca agtaccatgt gtacgaattc atggggaagg
      421 cctaattacg ctcgagctat gattgagtta gatgcagcca aagagttgaa tgatactatt
      481 cgtgtcgcta ctccatcttc ggaaggaggt gttaagttcg ttgatgttgt gagggtggag
      541 tatgaatgga actctcctcg atgctctaaa tgtaaagtgt ttggacatcg ggattcccaa
      601 tgtccaaaga atgttcataa ggaggtggtt caaataaagg atttggatgg ttttcagcct
      661 gtttccaaac acatgtctaa ggcaattgtt atagacaaaa ataaatttga aaataagaag
      721 aaacaagctg atggatttgt tgttggaaaa ggaaaacaaa agtttattta tagaccagta
      781 aacaaggagc taagctcgaa agcaggtggg gctgcaaatg cagtgagtac tagtaaggat
      841 cctgagccaa aaaatgtaag tatcgataac ccctttgatg tcttgaatac tattacagaa
      901 gaggacaata ataagaacaa agacactgaa aaagtcctca ttgatgagga tactgatctg
      961 gaagttgatg aaggagaagt gaatactacg gtgttaacta acgctgaggg ggcaagcact
     1021 ctcgtggaca ccggtctcaa tgattag
//
LOCUS       XM_071831981            2100 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841779), mRNA.
ACCESSION   XM_071831981
VERSION     XM_071831981.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2100
                     /gene="LOC139841779"
                     /note="uncharacterized LOC139841779; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841779"
     CDS             1..2100
                     /gene="LOC139841779"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688082.1"
                     /db_xref="GeneID:139841779"
                     /translation="MYAPTISPLINLDPINYLSIPFQLGHKILRSEGNITDLLARGKI
                     DSSRSDGHVRSCPSSLGAARSRRGRDFRVRIRVGSWNVGSLTSKSRELVETLLKSKVD
                     ILCVQETRWKGEEAVDIGDYKLWFSGSRVARNGVGIFIGPRHKDNIVGVGRCSDRIMS
                     VRLVIQEESYMVICAYAPHAGLGEEEKSRFWESLDEVVRSCPADHRLLIGGDLNGHIG
                     TISDGYAGVHGGFGYGVRNEEGRSILEFAVAHDLVVANSFFRKTEAQLTTFHSGGHST
                     QIDYLLLRKGDLRTCRDCKALTPWTCSTQHRLLVMDLVSQRRVTRRGRPTQPRILWKN
                     LNEEKAETFKASVLERVEAVMDTVTHGDADQMWNSFASTIRDVAKETLGVAVGTSRGH
                     KSCRESWWISDEVQTKVALKQLRFRELVTCRDGTRDDRTRAEERYKEAKREAKKAVAR
                     AKDKAYEVLYRKLDSKEGANDIYRIAKARERRRRDIDNIKFIKDEAGQTIVKEDKIRK
                     RWEGYFQSLFVGEGPGRQEDPQDLGIGHFQNNNFCRRISQEEVRSALRKMGRNKAVGP
                     DQIPIEAWRCLAFWPFAIISPVILFRGKGILVEDDFKGYTIKKEAVDQDVCVNASEAL
                     QGGVEFTFTRLVRLIMISMLPVVQFDEDVDPSAAATPSVTSAHPVIPAPPSVIAQPVT
                     PTPLVVIAPLLLTPSTG"
     misc_feature    229..939
                     /gene="LOC139841779"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(241..243,322..324,526..528,634..636,640..642,
                     835..837,913..918)
                     /gene="LOC139841779"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(322..324,913..915)
                     /gene="LOC139841779"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(526..528,640..642,916..918)
                     /gene="LOC139841779"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atgtacgcac ccacaatttc accacttatc aatttggatc cgatcaatta cttgtcaata
       61 ccttttcaat tagggcacaa aattctcaga tctgaaggta acataacgga tctactagcg
      121 aggggtaaga tagactctag tcgtagtgat ggtcacgtga ggtcatgtcc ttcgagctta
      181 ggggcggcta ggtctagaag gggtagagat tttcgtgtta ggattagagt aggtagttgg
      241 aatgtaggaa gtttgacgag caaatcccgt gaacttgtag agacgttact taagagtaaa
      301 gtggacatat tatgtgttca agagaccaga tggaagggtg aagaggcggt tgacattggt
      361 gactacaagt tgtggttttc gggttccaga gtagctagaa acggggtagg gatctttata
      421 gggccccgtc ataaggataa tattgtgggt gtgggtaggt gtagcgatag gattatgtcg
      481 gttaggttag ttatccagga ggagtcttac atggttattt gcgcttacgc acctcatgct
      541 ggtttaggcg aagaagaaaa aagtcgcttt tgggaatcgt tagatgaagt tgtgaggagt
      601 tgccccgctg atcatcgatt acttattggg ggagacctta atggacatat aggaacgatt
      661 tcagacggat atgcgggtgt ccatgggggc tttgggtacg gagttcgaaa tgaagaagga
      721 cgctccattc tcgaattcgc tgttgcccac gatttggttg ttgcaaactc tttctttagg
      781 aagacggaag ctcagctaac aaccttccac agtggaggtc atagtactca gattgattat
      841 ttgctgcttc gcaaagggga ccttaggacc tgcagagact gtaaagccct gactccctgg
      901 acctgttcca ctcaacacag acttttggtc atggacttgg tttcgcagag acgggttact
      961 aggagaggga gacccaccca acctaggatc ctttggaaga atctgaatga agagaaagcc
     1021 gaaactttca aagcatctgt tttggaaaga gtagaggcag taatggatac tgttactcat
     1081 ggggatgcag atcagatgtg gaatagtttc gcatcaacta ttagagatgt cgccaaggaa
     1141 accttaggtg tggcagtagg gacatcgaga ggacacaagt cttgtagaga atcatggtgg
     1201 attagtgatg aggttcaaac caaagtcgca cttaagcaac tgaggtttag ggagctcgtt
     1261 acatgtcggg acgggacacg tgatgacaga actagggcag aagaaaggta taaagaagct
     1321 aaaagagaag ctaagaaggc cgttgcccgt gcaaaagata aagcgtatga agttttgtat
     1381 aggaaactag actccaaaga aggagcaaat gatatttaca ggattgctaa agctagggag
     1441 cgtaggagga gggatataga taacatcaag ttcatcaagg atgaagccgg tcaaaccata
     1501 gtaaaggaag acaaaattag gaaaagatgg gaagggtatt tccaatctct attcgtgggt
     1561 gaaggacccg ggcgccaaga ggacccgcag gacttgggaa taggacattt ccagaacaac
     1621 aatttctgta ggagaatcag tcaggaagaa gtaagatcgg cactacgaaa gatgggtaga
     1681 aacaaagctg ttggaccaga ccagatccca atagaggcgt ggcggtgcct agccttttgg
     1741 ccatttgcta ttattagccc agtcatcctt tttaggggaa aagggattct tgttgaggat
     1801 gatttcaagg gttacacgat caaaaaagaa gctgtcgatc aagatgtctg tgtaaatgct
     1861 tctgaagctc tgcaaggtgg tgtggagttt acctttacac gtcttgtgcg cctgattatg
     1921 atttccatgt tgccagttgt tcaatttgac gaagatgtag atccctctgc tgctgctact
     1981 ccctctgtta cctctgcgca ccctgttatt cctgcgcccc catctgttat tgcacaacct
     2041 gtaactccaa ctcctcttgt tgtcatcgct ccattactgc taaccccttc tactggctga
//
LOCUS       XM_071831982            1159 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxidase 4-like
            (LOC139841780), mRNA.
ACCESSION   XM_071831982
VERSION     XM_071831982.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1159
                     /gene="LOC139841780"
                     /note="peroxidase 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 73
                     Proteins"
                     /db_xref="GeneID:139841780"
     CDS             51..1019
                     /gene="LOC139841780"
                     /codon_start=1
                     /product="peroxidase 4-like"
                     /protein_id="XP_071688083.1"
                     /db_xref="GeneID:139841780"
                     /translation="MASSKIICFALLACTLCLLSGISSAQLTPNFYSKSCPKVLDVVG
                     SVVRAAVSKEKRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTAGPNNNSVRGF
                     NVIDDIKKQVEKACPGVVSCADILAISALESVLALTGPSWKVKLGRRDAKTTSLAAAN
                     SGVIPPPSSTLANLINRFQAVGLSTKDMVALSGAHTIGQARCTTFRARVYNDTNINTS
                     FARSRQSKCPSTTGSGDNNLAPLDVQTPNHFDNTYYKNLIKQQGLLRSDQQLHNGGST
                     DSLVEQYSKNSKSFDADFAAAMIKMGDISPLTGSNGEIRKNCRVPN"
     misc_feature    126..1010
                     /gene="LOC139841780"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; Region: secretory_peroxidase; cd00693"
                     /db_xref="CDD:173827"
     misc_feature    order(216..218,225..230,234..239,246..251,342..344,
                     348..350,543..554,570..572,582..584,612..614,621..626,
                     630..635,639..653,657..662,771..773,840..842,846..848,
                     942..944)
                     /gene="LOC139841780"
                     /note="active site"
                     /db_xref="CDD:173827"
     misc_feature    order(216..218,225..230,234..239,246..248,333..335,
                     342..344,348..350,543..551,570..572,582..584,612..614,
                     621..626,630..635,639..653,660..662,771..773,840..842,
                     846..848,942..944)
                     /gene="LOC139841780"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:173827"
     misc_feature    order(237..239,327..332,543..554,651..653,657..662)
                     /gene="LOC139841780"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173827"
     misc_feature    order(252..254,261..263,273..275,279..281,636..638,
                     774..776,783..785,792..794,798..800)
                     /gene="LOC139841780"
                     /note="calcium binding sites [ion binding]; other site"
                     /db_xref="CDD:173827"
     polyA_site      1159
                     /gene="LOC139841780"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tctacatact cattcattac tacttcaaca tctagttact agtaaccaaa atggcttctt
       61 ctaagatcat ctgctttgca ttacttgctt gtaccttgtg cttgttgagc ggtatttcgt
      121 cagctcaact cacaccaaac ttctactcga aaagctgccc caaggttcta gacgttgtgg
      181 gctcagtggt tcgagccgct gtgtccaagg agaaacgtat gggcgcgtcc ctccttcgac
      241 ttcatttcca tgattgtttt gtcaatgggt gtgatgggtc gattctactt gacgatacat
      301 cttcgttcac cggagaaaaa accgccgggc caaacaataa ttcagttagg ggctttaacg
      361 tgatcgatga tatcaagaag caagttgaaa aagcgtgtcc tggtgttgtt tcatgtgctg
      421 atatactagc aatttccgct cttgaatccg tccttgcttt aacggggcct tcttggaaag
      481 tcaaactagg aagaagagac gccaaaacca ccagtctagc agcagccaac agcggcgtta
      541 ttccaccgcc atcatccaca ctagccaacc tcatcaacag gtttcaagca gtaggactct
      601 ctacaaaaga tatggttgca ctttctggtg cacatacaat aggacaagca agatgcacta
      661 cttttcgtgc acgtgtttat aacgatacca acattaatac ttcgttcgct agatcacgac
      721 aatccaaatg cccaagtaca actggttcag gggacaacaa tcttgcacca cttgatgttc
      781 aaacaccaaa ccattttgat aatacttatt ataagaactt gatcaagcaa caaggtttgt
      841 taaggtcaga tcaacagctt cataacggtg gttcgactga ttcgttggtt gagcagtata
      901 gcaagaattc taaaagtttt gatgctgatt ttgctgctgc tatgattaag atgggtgata
      961 ttagtccact tactggttct aatggtgaga ttaggaagaa ttgcagggtc cctaattaat
     1021 tcataatttg ttttttcaaa aatgtttttt ttttttttga gatttttgtt gttgtattat
     1081 gttgttttga aatgaagctg aaagggtttc tgtcaagtgt aattttattc atgcaatcaa
     1141 gaaacttgat tgttgatta
//
LOCUS       XM_071831983            2120 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sister chromatid cohesion 1
            protein 3 (LOC139841781), mRNA.
ACCESSION   XM_071831983
VERSION     XM_071831983.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2120
                     /gene="LOC139841781"
                     /note="sister chromatid cohesion 1 protein 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841781"
     CDS             1..2013
                     /gene="LOC139841781"
                     /codon_start=1
                     /product="sister chromatid cohesion 1 protein 3"
                     /protein_id="XP_071688084.1"
                     /db_xref="GeneID:139841781"
                     /translation="MFYSHNLLAKKGPLGTVWCAAHLQNRLKKSNYITINIPSTVEQI
                     MYPQVPIALRMSGHLLLGVVRIYSKKVEYLQHDYNALSIDLSKAYAYADINLPQDANQ
                     AKFESITLPDNFALDLMDIDEYDPNRSPDSHLRRNEDISFADDSPVRISKKVDQTPSG
                     YIRIAVGEDAPNTPSPSGDVSGPRLIAVEENLHTPPPTMEDARDHVIDDQMESNDTFR
                     NEDNLPSPEYQREADNGGNSYMTTPFKLILPETVEPDLELELQLTKEKGIGSSNLDEI
                     LDHGGPPSPPPIQTQPQKSAHSEPEPEVFQDMSDPHVSYGLAPSPPPVEPVVAPEQPR
                     VKRRRIKYDKATVLTNEFMKKSIDDPSDLKRKRKGVSSFLGVWKRNNAYKKEKVLFDP
                     LITGLCDNHCQMFEDGYVSSKPNLINTEEPNPDAAEVNRSAGFGDPTEEPTPDAMEIG
                     RSAAFVDPNDNMLPNMSPDNRSFNSPRTEAENTPAISSDIGSKMYQAQTTVGTGIGST
                     PDPTSSMGSFVSETETPFPFSESHQGFNNSGGLSDIPEVDDAGELACLEDDEATPGKL
                     SLRDTPNSSGQRRSPPDSGSLLPRTRAVAQYIKEKSTATPNSENVGSVSMKSILQGKT
                     RKVCSRFFFETLVLKTCDLVDVKQDEPYGDVTLKVTPKLSKLHFSN"
     misc_feature    1..312
                     /gene="LOC139841781"
                     /note="N terminus of Rad21 / Rec8 like protein; Region:
                     Rad21_Rec8_N; pfam04825"
                     /db_xref="CDD:461446"
     misc_feature    994..1236
                     /gene="LOC139841781"
                     /note="Middle HEAT-repeat binding domain found in
                     Arabidopsis thaliana sister chromatid cohesion 1 protein
                     1-4 (SYN1-4) and similar proteins; Region:
                     Rad21_Rec8_M_AtSYN1-like; cd21793"
                     /db_xref="CDD:439295"
     misc_feature    order(1009..1017,1027..1050,1057..1059,1066..1071,
                     1090..1110,1153..1155,1162..1179,1201..1206,1210..1227)
                     /gene="LOC139841781"
                     /note="putative HEAT-repeat binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:439295"
     misc_feature    1825..1989
                     /gene="LOC139841781"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     Region: Rad21_Rec8; pfam04824"
                     /db_xref="CDD:335912"
ORIGIN      
        1 atgttttact cacataatct gcttgcaaaa aaaggtccac tgggtacagt ctggtgtgcc
       61 gctcatcttc aaaataggct caagaaatcg aattatatca ccattaacat cccatcaact
      121 gttgagcaaa taatgtatcc ccaagtaccg attgcattga gaatgtcggg tcatcttctt
      181 cttggtgttg ttcggatata ttcaaagaaa gtggagtatc tgcagcatga ctataatgct
      241 ctaagtatag acctcagcaa agcatatgca tatgcagata ttaatcttcc acaagatgcc
      301 aatcaagcaa aatttgaatc catcactttg cctgataatt ttgctctcga tttgatggat
      361 atcgacgaat atgaccccaa tcgttctcct gacagccatc ttagacgcaa cgaagatatt
      421 tcatttgcag atgacagtcc agttagaatt tcaaaaaagg tagatcaaac tccttcagga
      481 tatattagga ttgctgttgg tgaggatgca cccaatactc catctccctc tggagatgtt
      541 tcaggaccga ggctgattgc tgtggaagaa aatcttcata ctccaccacc aacaatggaa
      601 gatgcccgag atcatgttat tgatgatcaa atggaatcta atgacacgtt ccgtaatgaa
      661 gataacttac cctcacctga atatcaacgt gaagctgata atggtggtaa ttcgtatatg
      721 actactccat ttaaattaat tcttcctgag acggttgaac cagacttaga attggagttg
      781 cagctcacaa aagaaaaggg tatcggttca tcgaatctcg atgagatttt ggatcatggt
      841 ggaccgcctt ctccacctcc tattcaaacc caaccacaaa aatcagctca ttctgagcct
      901 gaaccagaag ttttccaaga catgtcagac cctcatgtct cgtacgggct agcaccatct
      961 cctccaccag ttgaaccagt tgtggcacct gagcagccgc gggtaaaacg tagaagaatt
     1021 aagtacgata aagctacagt tttgactaac gagttcatga aaaaatctat agacgatcct
     1081 agcgatttga aacggaaaag aaaaggagtg tcatcttttt tgggtgtttg gaagcgaaac
     1141 aacgcttaca aaaaggaaaa agtccttttt gacccattaa ttactgggtt gtgtgataat
     1201 cattgtcaaa tgtttgagga cggctatgtg tcttcaaagc ctaatctgat taacaccgaa
     1261 gaacctaatc ctgatgctgc agaagttaat cgttcagctg gttttgggga ccccactgaa
     1321 gaacctactc ctgatgctat ggaaattgga cgttctgctg cttttgtgga ccccaatgac
     1381 aatatgttac caaatatgtc tccagataac agatcgttta attctccacg tacagaagct
     1441 gaaaataccc ctgcaataag tagtgacatt gggtcaaaga tgtatcaggc tcagactact
     1501 gtagggactg gtatcgggtc cacaccggac cccacgtcat ctatgggatc ttttgtgtct
     1561 gaaacggaaa caccgtttcc gttttctgaa agtcatcaag gttttaataa tagtggtggt
     1621 ctatctgata ttcctgaggt ggatgatgct ggggagctgg cgtgtttgga agatgatgag
     1681 gctacaccag gtaagctgag tttgagggat acccccaatt cgtctgggca acgtagatca
     1741 ccaccagatt ctggctcgct gttaccgaga actagggctg tagcacaata cataaaggaa
     1801 aaatcaacgg ctactcctaa ttctgaaaac gtaggatctg ttagtatgaa aagcattcta
     1861 caaggaaaaa caagaaaagt ttgctctcga ttcttttttg agactctggt tttgaagact
     1921 tgtgaccttg ttgatgtaaa gcaagatgaa ccgtatggtg atgtcactct gaaggtgaca
     1981 cctaagcttt caaagcttca cttttcaaac tagatttgct ccaaaactct cagcaaattc
     2041 tgctgttttt tcgatttagt tattatcatc tttttgagtt tttaggagca gcgtagataa
     2101 gtttgtagag tgtaagatct
//
LOCUS       XM_071831984            4121 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides clustered mitochondria
            protein-like (LOC139841783), mRNA.
ACCESSION   XM_071831984
VERSION     XM_071831984.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 2 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-108               JBITNF010000004.1  355414260-355414367
            109-337             JBITNF010000004.1  355414716-355414944
            338-399             JBITNF010000004.1  355415292-355415353
            400-459             JBITNF010000004.1  355415439-355415498
            460-460             "N"                1-1
            461-589             JBITNF010000004.1  355415499-355415627
            590-592             JBITNF010000004.1  355418188-355418190
            593-733             JBITNF010000004.1  355421918-355422058
            734-890             JBITNF010000004.1  355422145-355422301
            891-1084            JBITNF010000004.1  355422594-355422787
            1085-1418           JBITNF010000004.1  355422889-355423222
            1419-1547           JBITNF010000004.1  355423391-355423519
            1548-1866           JBITNF010000004.1  355424003-355424321
            1867-1971           JBITNF010000004.1  355425215-355425319
            1972-2090           JBITNF010000004.1  355425402-355425520
            2091-2199           JBITNF010000004.1  355425712-355425820
            2200-2313           JBITNF010000004.1  355425910-355426023
            2314-2445           JBITNF010000004.1  355426107-355426238
            2446-2616           JBITNF010000004.1  355426318-355426488
            2617-2703           JBITNF010000004.1  355426570-355426656
            2704-2814           JBITNF010000004.1  355426747-355426857
            2815-2910           JBITNF010000004.1  355426988-355427083
            2911-2979           JBITNF010000004.1  355437566-355437634
            2980-3138           JBITNF010000004.1  355437720-355437878
            3139-3195           JBITNF010000004.1  355438306-355438362
            3196-3236           JBITNF010000004.1  355438470-355438510
            3237-3327           JBITNF010000004.1  355438937-355439027
            3328-3328           "N"                1-1
            3329-3356           JBITNF010000004.1  355439028-355439055
            3357-3666           JBITNF010000004.1  355439134-355439443
            3667-3774           JBITNF010000004.1  355439537-355439644
            3775-3870           JBITNF010000004.1  355444762-355444857
            3871-4121           JBITNF010000004.1  355445040-355445290
FEATURES             Location/Qualifiers
     source          1..4121
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4121
                     /gene="LOC139841783"
                     /note="clustered mitochondria protein-like; The sequence
                     of the model RefSeq transcript was modified relative to
                     its source genomic sequence to represent the inferred CDS:
                     inserted 2 bases in 2 codons; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841783"
     CDS             136..4020
                     /gene="LOC139841783"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons;
                     substituted 1 base at 1 genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1252..1254,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: clustered mitochondria
                     protein-like"
                     /protein_id="XP_071688085.1"
                     /db_xref="GeneID:139841783"
                     /translation="MAGKSSRGRNKKGTNHAAAATNNTATASAKNATTEQVVVLNGHS
                     KEILNSVEEPDLAVASSENQAKQGDIHLFPVPVKTQSGEKLELKLSTSDSVMDVRQFL
                     LDTPKTXFYTCYVLLLHAKDGSTHHLEDYHEISEVSDITTGDCSLEMVAAALYDDRSI
                     RAQVSRTRDLLSLSTLHSSLSISLAWQHEMGQNATANSGDLSKIEVAELENLGFMEDV
                     SGSLSSLLSSPPKEIKCVETIVFSSFNPPPSYRRLVGDLIYLDVVTLEGSKYCITGTT
                     TTFYVNSSSGNTLDPKPTKAASESTTLIGLLQKISPKFKKAFREMLERKASAHPFENI
                     QPSMPPNSWLGLYPVLGNLIVFVYFKCHLFIYLYLFLSXLIMFLLYDADHKRDAARAE
                     SSLTLSFGSELIGMQRDWNEELQSCREFPHATPQERILRDRALYKVSSDFVDAAISGA
                     IGVISRCIPPINPTDPECFHIYVHNNMFFSFAVDADLEQLSRKQSSDSNLNSCEEVLT
                     KLSTKVNGAVESISDAASDAQLAESEQATYASSNNDLKATKAYQQADVPGLYNLAMAI
                     VDYRGHRVVAQSVLPGILQGDKSDSLLYGSVDNGKKICWNQDFHAKVLEASKRLRVKE
                     HRVLDGSGNVFQIAAPVECKGIVGSDDRHYLLDLTRVTPRDANYTGTNSKFCILRPEL
                     ITPFCQAEASKISKAKIEPQETSTDSSKVDDNGDQETQTKTAKTNESENDKKAVDEGV
                     AKTYEVVDKTDAICINSNVFTEFKLAGTREEIAADEESVRNVSLYLKDTVIPKFIQDL
                     CSLEVSPMDGQTLTEALHAHGINVQYIGKVADGTKHLPHLWDLCSNEIVVRCAKHILK
                     DVLRDTADHDIGHAVAQFFNCLFGDIGQSKYQKKGKQDVVATKKQASCMSLSSESLWS
                     DIREFSKAKYKFELPEDARSRVKKISVIRNLCLKVGVTVAAKKYDLSAKTPFETSDIS
                     NLQPVVKHSIPVCKEAKELVETGKVQLAEGMLNEAYTQFTDAFTILQQVTGPMHLDVA
                     NCYRNLAMVLYHAGDTAAAIMQQHKELIINERCFXLDHPDTAHSYGNMVLFYHGLNQS
                     ELALRYMSRALFLLSLSSGPDHPDVTATYINVAMMYQDIGKMNTALRYLQEALKNNER
                     LLGEEHIQTAVCYHALAIAFNCVGAYKLSHQHEKKTYDILVKQLGEDDSRTRDSQNWM
                     KTFKAREAQMTTQKQEGQAANVVSAQATIDLLKIHQTTSSKAHPDLIQAFQAASGGGA
                     SGNGGCDISEIREKAAARALLIRLITDRMMDD"
     misc_feature    409..642
                     /gene="LOC139841783"
                     /note="Mitochondrial function, CLU-N-term; Region: CLU_N;
                     pfam15044"
                     /db_xref="CDD:464466"
     misc_feature    <901..1110
                     /gene="LOC139841783"
                     /note="GSKIP domain; Region: GSKIP_dom; pfam05303"
                     /db_xref="CDD:398795"
     misc_feature    1360..2139
                     /gene="LOC139841783"
                     /note="Clustered mitochondria; Region: CLU; pfam13236"
                     /db_xref="CDD:463814"
     misc_feature    2539..3015
                     /gene="LOC139841783"
                     /note="Translation initiation factor eIF3 subunit 135;
                     Region: eIF3_p135; pfam12807"
                     /db_xref="CDD:463717"
     misc_feature    3097..3183
                     /gene="LOC139841783"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    <3139..3744
                     /gene="LOC139841783"
                     /note="FxSxx-COOH system tetratricopeptide repeat protein;
                     Region: FxSxx_TPR; NF040586"
                     /db_xref="CDD:468560"
     misc_feature    3223..3309
                     /gene="LOC139841783"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(3226..3228,3235..3240,3247..3252,3256..3258,
                     3352..3354,3361..3366,3373..3378,3382..3387,3469..3471,
                     3487..3492,3499..3504,3511..3513)
                     /gene="LOC139841783"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    3346..3438
                     /gene="LOC139841783"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    3466..3561
                     /gene="LOC139841783"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    3601..3678
                     /gene="LOC139841783"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
ORIGIN      
        1 aatagtagca cccaatatat atatacacac acacaaaatc tgtttttttt tctttaatct
       61 taatttccct gtattttatc cgccaaattc aatcgctgtc aaatacaggg tttaagtgat
      121 taggtagtag aaaatatggc tgggaaatca agccgaggga ggaataagaa agggacgaat
      181 cacgcggctg ctgctacgaa taacacggcc accgctagtg ccaaaaatgc tacaacagaa
      241 caagtggttg tattgaatgg tcattcgaaa gaaattttga attctgttga agaaccggac
      301 ttagcagttg caagctctga gaatcaggct aagcaaggtg acattcatct tttccctgtt
      361 cccgtcaaaa cgcaatctgg tgaaaagctc gagttgaaat tgagtacgag tgactctgtt
      421 atggacgtga gacaattcct tcttgatact cccaagacgn tcttttatac ctgctatgtt
      481 ttattacttc acgctaagga cgggtcgacc catcatttag aagattacca tgaaatttct
      541 gaagttagtg atatcactac cggagattgt tctctagaaa tggttgcagc tgctttatat
      601 gatgatagat caatcagggc ccaagtcagt cgtaccagag acttactttc tctatcgaca
      661 ctacactcat ccttatcgat atcacttgca tggcaacatg agatggggca aaatgcgacc
      721 gccaattcag gagacctttc aaaaatcgag gtcgcggagc tagaaaattt gggtttcatg
      781 gaagacgtct cgggttcact ttcgagcttg ttatcatctc ctccgaaaga gattaaatgc
      841 gttgaaacta ttgtgttttc ctcatttaac cctcctccaa gctacagaag gcttgttggg
      901 gatctaatct atctggatgt ggtgacactg gaaggcagca agtactgtat aaccggaacc
      961 acaacaacgt tttatgttaa ttcaagttcc ggaaataccc ttgacccaaa accaactaaa
     1021 gctgcttctg aatcaactac ccttattgga ctcttgcaga agattagccc caaattcaag
     1081 aaagcttttc gtgaaatgtt ggagcgtaag gcttctgctc atccatttga aaacattcag
     1141 ccatcgatgc ctcctaattc atggctggga ttgtaccctg ttcttggtaa tttaattgtt
     1201 tttgtctact tcaaatgcca tttgtttatt tatttatatt tatttttatc atgactaatt
     1261 atgtttttat tgtatgatgc agatcataaa cgtgatgcag ctagagcaga aagttcactt
     1321 actctctcgt ttgggagtga gttgataggc atgcaaagag actggaacga ggaactacaa
     1381 tcctgtagag agtttcctca tgcaacccct caagaaagga ttttgagaga tagagctctg
     1441 tataaggtat cttctgattt cgttgatgct gcaataagtg gtgctattgg agttatcagt
     1501 agatgcatac caccaattaa tccaacagat cccgagtgct ttcacatata cgttcacaac
     1561 aacatgttct tcagctttgc tgttgacgcg gatctcgagc agttgtctcg aaagcagtcg
     1621 tcagattcaa acttaaattc ttgtgaagaa gtgttgacca aattgtctac caaggtcaat
     1681 ggtgctgtgg aatcaatttc tgatgcagcg tcagatgcac agctggcaga gagtgaacaa
     1741 gccacatatg catcttctaa caatgattta aaagccacaa aagcgtacca acaagctgat
     1801 gttcctgggc tgtataatct tgcgatggct attgttgact atagaggtca tagagtagta
     1861 gcacagagtg ttctgccagg aattttacaa ggcgataaat ctgattcact tctgtatggg
     1921 tctgttgaca atggcaagaa gatttgctgg aatcaagatt ttcatgccaa ggttttggaa
     1981 gcttcaaagc gcctacgggt gaaggaacac agggttcttg atggttcagg aaacgttttt
     2041 caaatagctg ctccagttga atgcaagggc attgttggaa gtgatgatag gcactatctt
     2101 ttggacctga cgagagtgac tccccgtgat gcaaattata caggaacaaa ttccaaattt
     2161 tgtatattgc gacctgaatt aatcactccc ttttgtcagg ctgaagcatc caagatttca
     2221 aaagctaaga ttgagccaca ggaaacatct acagattctt caaaggttga tgataatggt
     2281 gaccaagaaa ctcaaaccaa gactgcaaaa actaacgagt cagaaaatga taaaaaggct
     2341 gttgatgaag gtgttgccaa gacttatgag gtggttgata aaaccgacgc tatatgtatt
     2401 aattctaatg tatttacaga atttaagttg gctggcacac gtgaggagat tgctgctgat
     2461 gaagaaagtg tacggaacgt gagtttgtat ctaaaggata ctgtgattcc gaaattcata
     2521 caagaccttt gctcactcga agtttcaccg atggatggcc agacactaac tgaagcactc
     2581 catgcacatg gaattaacgt tcaatatatc ggcaaagtag ctgatggtac gaagcacctg
     2641 cctcatttat gggatctttg ttccaatgag attgtcgtta gatgtgcaaa acacatcctc
     2701 aaggatgtgt tgagagatac tgcagatcat gatattggac atgcagttgc tcaatttttt
     2761 aattgtttat ttggggatat tggccagtcc aaatatcaga aaaaaggtaa acaagacgtt
     2821 gttgctacta aaaaacaagc ttcttgcatg agtctcagtt ctgaaagttt gtggtctgat
     2881 attcgtgaat tttcaaaagc taaatacaag tttgaattac cagaggatgc aaggtcacgt
     2941 gtgaagaaga tttcagttat tcgtaacctt tgcttgaagg taggagtaac cgtagctgcg
     3001 aagaagtacg atcttagtgc caaaacacct ttcgaaacat cagatatatc gaatcttcaa
     3061 cctgtagtga agcattcaat acccgtatgc aaagaagcaa aggagctggt ggaaacagga
     3121 aaagtccagt tggccgaggg aatgcttaat gaagcgtaca ctcaatttac agatgctttt
     3181 acaatacttc agcaggtcac aggtccaatg catctagatg ttgctaactg ctaccgtaac
     3241 ttagccatgg ttctttacca tgccggggac acggctgcag ccattatgca gcagcacaaa
     3301 gaacttatta taaacgaacg gtgctttngt cttgaccacc cagacacagc tcacagttac
     3361 gggaacatgg tgttattcta tcacggactt aaccaatcag aacttgcatt gcgatatatg
     3421 tcacgtgcac tgttcctatt aagcttgtca tctggcccag atcatcctga tgttactgca
     3481 acttatatta atgttgcaat gatgtatcaa gatatcggaa aaatgaatac ggctcttcgt
     3541 tatctacaag aagcgttgaa aaataacgag aggcttttgg gtgaagaaca tattcaaact
     3601 gctgtatgct atcacgcact tgcaatcgcc tttaactgtg ttggtgccta taagctttct
     3661 catcagcatg aaaagaagac gtatgatata cttgtgaagc aacttggtga ggatgactcg
     3721 agaactcgtg actcgcagaa ttggatgaaa acttttaaag caagggaggc gcagatgact
     3781 acacaaaagc aggaaggaca agctgcaaat gttgtttcag ctcaagcaac aattgatctt
     3841 ttaaagatac atcaaaccac atcgtcaaag gctcaccctg atttgataca agcattccaa
     3901 gcagcatctg gcggtggagc ttcaggcaat ggcggctgtg acattagcga aataagggaa
     3961 aaagctgctg ctagagctct actaattcgg ctgataactg atcgaatgat ggatgactaa
     4021 ggatattagt gtatgggtca tggttatgtg ccaactgttt tggctttaat actcaattag
     4081 cgtcatgtca ctgagtacct tcaattatga atgggctttc a
//
LOCUS       XM_071831985             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841784), mRNA.
ACCESSION   XM_071831985
VERSION     XM_071831985.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139841784"
                     /note="uncharacterized LOC139841784; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841784"
     CDS             1..750
                     /gene="LOC139841784"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688086.1"
                     /db_xref="GeneID:139841784"
                     /translation="MPIYFVIKGQILADFLLETTEKVDHLPNITASNHVWELHTDGAS
                     SEEGVGAGLVLTSPEGEEHTYALRFSFYASNNEAEYEALLSGLRIASEMGIKHLRAYV
                     DSQIVAQQVNGGFEAKDVSMKQYLQLVDKISKYFETLEVVQIPRNKNKKADVLSKLAT
                     LTFDHLHKKVLVEVLKDKSVDEKVVVAIVEERESCWITPYVKYLQDGILPTDTMEARR
                     IRVSAPLYLLENGILYRKSFNGPNLRCLTPQ"
     misc_feature    106..477
                     /gene="LOC139841784"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(121..132,220..228,235..237,307..309,427..429,
                     469..471)
                     /gene="LOC139841784"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgcctatat actttgtcat caaaggtcaa attttggcag attttttatt agaaacaaca
       61 gaaaaggtcg atcatttgcc aaacattaca gctagtaatc atgtttggga gttgcacact
      121 gatggtgcat caagtgagga aggtgttggt gcagggttag tacttactag tccagaaggt
      181 gaggagcata cgtatgcatt gaggtttagt ttctatgcat ctaataatga agcagaatat
      241 gaagcattgc tttccggcct ccgcatagca tcggaaatgg ggataaaaca tttgcgtgca
      301 tatgttgatt ctcaaattgt ggcacaacag gttaatggag ggtttgaagc taaagatgtc
      361 tctatgaaac agtatttgca attagttgat aaaatatcaa aatatttcga gaccttagag
      421 gtcgtgcaga taccaagaaa taaaaacaag aaggcagatg ttttgagcaa attagcaaca
      481 ttaacatttg atcatttgca caagaaagtt ttggtggagg tcttaaaaga taaatcggtt
      541 gatgaaaagg tagtggttgc aatagttgaa gaaagggaat catgttggat aaccccctat
      601 gtgaaatatt tgcaggatgg aatactgcca acagatacca tggaagcaag acggataaga
      661 gttagtgctc cactttacct cctggaaaac ggaatacttt atagaaaatc cttcaatgga
      721 ccaaatttaa ggtgtttaac accacagtaa
//
LOCUS       XM_071831986            1641 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841786), mRNA.
ACCESSION   XM_071831986
VERSION     XM_071831986.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1641
                     /gene="LOC139841786"
                     /note="uncharacterized LOC139841786; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841786"
     CDS             1..1641
                     /gene="LOC139841786"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688087.1"
                     /db_xref="GeneID:139841786"
                     /translation="MPIVVSCKIAEAEITVMKVHVDNGSSVDIIYEQCFVQLPEGIKA
                     NLQPTAVLLTGFAGESSLPMGILPLEIELADVNDKALARQARLDFYVMRASSRYNLLL
                     ERTAIRQETADDADNMEIINPAYPEQKIKVGRNISADTRKQIIQLLVQYMDVFAWREN
                     DITGVPRHIAEHRHNVNPALKPIVQKRRGMAPDRVKWLCEEVAKLVRARILREVQYQS
                     WIVNPVLVKKPDGSWRMWRNLEAYVDDLVIKSTTQERIIEDMCETFDTLRKINMKLNQ
                     LKCSFGAERQLPFFKSLKGCLKQKSFVWSSEAETAFQEMKKLLKTLPILTAPIDGEIL
                     YLYISVANEAFEISGRLALWAVELGAYQISYLPCSDVKGQVMADYLAKMSGELEVINE
                     RTALKPVLGETWDLFTDGASCAGGAGAGLVLANPSGEEHTYALRFNFDVSNNEAEYEA
                     LLAGLNIARKMNIAKLRAFTDSQLVANQFNCSFEAHDPSMQKYLQLLKELAARFEHFE
                     LAQVPRSQNKEADALSKLAALTFSHFQKQGLAMLNSRL"
     misc_feature    13..306
                     /gene="LOC139841786"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(64..66,70..72,76..78,157..165,301..303)
                     /gene="LOC139841786"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    64..72
                     /gene="LOC139841786"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    64..66
                     /gene="LOC139841786"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(157..168,178..189)
                     /gene="LOC139841786"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    <469..>603
                     /gene="LOC139841786"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; Region: AAT_I;
                     cl18945"
                     /db_xref="CDD:450240"
     misc_feature    <709..855
                     /gene="LOC139841786"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    910..>1011
                     /gene="LOC139841786"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    1273..1584
                     /gene="LOC139841786"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgccgatag tagtatcgtg caaaatcgca gaagctgaaa ttacagtcat gaaagttcat
       61 gttgataatg gcagcagtgt tgatattatc tacgaacaat gctttgttca gctgccggag
      121 ggtattaaag caaacctaca accaaccgcg gttttgctaa ctggttttgc aggtgagtct
      181 tcattgccta tgggcatttt gccattagaa atcgagctag ccgatgtaaa tgacaaagct
      241 ttggcacgac aggcgcggtt agatttttat gttatgcgag cctcatctcg ctataacttg
      301 ctgctggaaa gaaccgctat aaggcaggaa actgctgatg atgcggataa tatggaaatt
      361 attaatcccg catatcctga gcagaaaatt aaagtgggac gcaatattag tgcggatact
      421 aggaagcaaa taatccaatt acttgtccag tacatggatg tttttgcttg gagagaaaac
      481 gatattactg gtgttccgcg tcatattgcg gaacacaggc ataatgtaaa tccagcccta
      541 aaacctatag tgcaaaagcg aaggggtatg gccccagacc gcgtaaaatg gttgtgcgaa
      601 gaagtagcaa aattggtgag agctagaatt ttgcgtgaag ttcaatacca atcgtggatc
      661 gtgaatccag tgttggtgaa aaaaccagat ggttcttgga gaatgtggcg taatcttgag
      721 gcttatgtag atgatttagt gatcaaaagc acaacgcaag agcgaattat tgaagatatg
      781 tgcgaaacat ttgatacact gcgaaaaata aacatgaaac tcaatcagct aaaatgcagt
      841 ttcggtgctg aaaggcagtt gccgtttttc aaatctttaa aaggatgttt gaaacaaaaa
      901 agttttgttt ggtccagtga agcagaaacc gcgtttcaag agatgaaaaa gttgttgaaa
      961 actttgccta tactaacagc gccaattgat ggcgaaattc tttaccttta tatatcagtg
     1021 gcaaacgaag ctttcgagat atctggtaga cttgcattgt gggcagtcga attaggtgct
     1081 tatcaaatat cttaccttcc gtgtagtgat gtaaaaggtc aggttatggc ggattacctc
     1141 gctaaaatgt ctggagaatt ggaggtgatt aatgagcgaa ccgcgttgaa accggtactg
     1201 ggcgaaactt gggatttgtt tactgatggt gcttcatgcg caggaggtgc aggtgcgggt
     1261 ttggttttgg caaatccaag tggtgaggag catacgtatg cactgcgttt taattttgat
     1321 gtgtcaaata atgaagcgga gtatgaagca ctacttgctg gtttaaatat tgcgcgaaaa
     1381 atgaatattg ctaagttgcg agcatttaca gattcgcagt tagtagcgaa tcagtttaat
     1441 tgctctttcg aagcacatga tccttctatg cagaaatact tgcagctact aaaggaatta
     1501 gcagcgcggt ttgaacattt tgaacttgca caagtgccaa gaagtcaaaa taaggaggca
     1561 gatgctttga gcaagttagc cgctttaacg ttttcgcatt ttcaaaaaca aggcctggca
     1621 atgttaaatt cccgattgtg a
//
LOCUS       XM_071831988             918 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein
            WIP4-like (LOC139841788), mRNA.
ACCESSION   XM_071831988
VERSION     XM_071831988.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..918
                     /gene="LOC139841788"
                     /note="zinc finger protein WIP4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841788"
     CDS             1..918
                     /gene="LOC139841788"
                     /codon_start=1
                     /product="zinc finger protein WIP4-like"
                     /protein_id="XP_071688089.1"
                     /db_xref="GeneID:139841788"
                     /translation="MRNPTFFKGCLPFTTHHPHYYSYYYTNNHSSSLHPYHNIPSSPP
                     LIEAQPLLSKLNQKRDLNEDYILSTTTNAAVNVTLNIGLLPTTTTTTSCTNNHYSDYY
                     KCMIGSDDKMLLGFPINRLIKKTNQCWTPSPRQILTGLNKFLCPVCSKNFTRYNNLQM
                     HMWGHGSQYRKGPESLKGTQPTTMLKMPCYCCVVGCKHHMDHPRSRPLKDFRTLQTHY
                     KRKHGTKPFECSKCGKAIAVKGDWRTHEKNCGRIWYCNCGSDFKHKRSLKDHVKAFGH
                     GHCGVSDIKFSNQEQEGEDEGMLSEIEHM"
ORIGIN      
        1 atgagaaatc caaccttctt caaaggatgc ttacctttca ctactcacca cccacactat
       61 tactcttact attacactaa taatcattct tcttctctac acccttatca taacatacct
      121 tcatcacctc ctttgataga agctcaacct cttcttagca aattaaacca aaaaagagac
      181 ctaaatgaag actacatttt gtcaacaacc actaatgcag cagttaatgt aaccctaaat
      241 ataggactac tccctactac tactactact actagctgca ctaataatca ttactctgat
      301 tattataagt gtatgattgg tagtgatgat aaaatgcttc tagggtttcc tataaacaga
      361 ttgatcaaga agactaatca gtgctggact cctagccccc gtcagattct tactggttta
      421 aataagtttt tatgcccagt ttgctccaag aacttcacca gatataataa tcttcagatg
      481 catatgtggg gacatggatc acaatacaga aagggaccag agtcattaaa gggaactcag
      541 cccacaacaa tgctaaagat gccatgctac tgttgtgtag ttggttgcaa gcaccacatg
      601 gaccatccaa ggtctagacc acttaaagac tttagaaccc ttcaaacaca ttacaaaaga
      661 aagcatggaa ccaagccatt tgagtgcagt aaatgtggaa aagcgattgc ggtaaaaggt
      721 gattggagaa cacatgagaa aaattgtggc aggatttggt attgtaattg tggttctgat
      781 tttaagcaca aaaggtcact taaagatcat gttaaggcat tcggtcatgg ccattgtggc
      841 gtctctgata taaaattttc gaatcaagaa caagaaggtg aagatgaagg catgctttcg
      901 gagatcgaac acatgtaa
//
LOCUS       XM_071831989             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841789), mRNA.
ACCESSION   XM_071831989
VERSION     XM_071831989.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139841789"
                     /note="uncharacterized LOC139841789; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841789"
     CDS             1..447
                     /gene="LOC139841789"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688090.1"
                     /db_xref="GeneID:139841789"
                     /translation="MPNSLYERLGLGPLKPTRIRIRLANHSFDTTIGIAEDILISIDT
                     LVFSVDFIIIEMKEDLQVPLILGRPFLATADTIILVQRNQLNIGVGKEHVTINIREAM
                     KQLSNTDDDECYAFDHIDLHAHDKLKKLLKVDTSEFNQIVIMRLWI"
     misc_feature    <1..216
                     /gene="LOC139841789"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(61..72,82..93)
                     /gene="LOC139841789"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcccaatt cactttatga gaggcttggt cttggacctc ttaaaccaac tcgaattagg
       61 ataagattgg ctaaccattc atttgatacc actattggca tcgctgagga catcttaatt
      121 agcattgaca ccttggtgtt ctcggtcgat tttattatca tagagatgaa ggaggacctt
      181 caagtccccc tcatcttagg tagaccattt ttggcgactg ccgacaccat catcttagta
      241 caacgtaacc aacttaatat tggagttggc aaagaacatg tgaccatcaa tatccgggaa
      301 gctatgaagc aactgagtaa caccgatgat gatgagtgct atgcctttga ccatattgac
      361 cttcatgcgc atgataaact taaaaaactt ttaaaggttg atacttcgga gttcaaccaa
      421 attgtgataa tgagattgtg gatttag
//
LOCUS       XM_071831990             855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841791), mRNA.
ACCESSION   XM_071831990
VERSION     XM_071831990.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..855
                     /gene="LOC139841791"
                     /note="uncharacterized LOC139841791; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841791"
     CDS             1..855
                     /gene="LOC139841791"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688091.1"
                     /db_xref="GeneID:139841791"
                     /translation="MAPSVLKDHSTLKSTKRRNRKITPIEANMIHSWQAIQRRKAEAL
                     EDWKQELIAFPSMFNTNPSDAPVVIEARIANFIVGGIYTDTGVGANIMYEHCFEQLPE
                     RVKEKLKDMFVPLASFANDPSWSEGSIVLEVVLGKTPFKRTTHIEFLVVKANSQYNVI
                     LGRSAMMTFGAVTSTVYEMMKFPTPAGIATLYAERRRAIECVQINRTDVNPIVHEDGS
                     VSPNPEFPDQKIIIENTIAKETKKKLYKILATNLYVFAWQDSDLTGEPCHVAEHRLGV
                     NPNIPPVL"
     misc_feature    250..489
                     /gene="LOC139841791"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(250..252,256..258,262..264,343..351,478..480)
                     /gene="LOC139841791"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    250..258
                     /gene="LOC139841791"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    250..252
                     /gene="LOC139841791"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(343..354,364..375)
                     /gene="LOC139841791"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggcgccat ccgttctaaa ggatcactca actcttaaga gcaccaaaag gcgtaatcgc
       61 aagataacac ctattgaagc aaacatgata cactcatggc aagctataca acgaaggaaa
      121 gcagaagcat tagaagattg gaaacaggaa ttgattgctt ttccttccat gtttaacact
      181 aatccatctg atgctcctgt agtgattgaa gcccgaatag caaatttcat tgttggggga
      241 atatatactg atacaggagt aggagcaaat atcatgtatg agcattgttt tgaacaatta
      301 ccagaaagag ttaaggagaa gttgaaagac atgtttgttc ccttagcaag ttttgctaat
      361 gatccgtcat ggtcagaagg aagcatagtg ttagaagtag tcttgggaaa aacaccattc
      421 aaacgaacaa ctcatattga gtttttagtt gtcaaagcaa attcacagta taatgtcatt
      481 ttaggtcgat cagctatgat gacatttgga gctgtgacgt caacggtgta cgaaatgatg
      541 aaatttccca caccggctgg tatcgccacg ctatacgctg aacggagaag agcaatagaa
      601 tgtgtgcaaa taaacagaac agatgttaac ccaattgtac atgaagatgg ttcagtgtcg
      661 ccaaatccag aatttccaga tcagaaaatt atcattgaaa acacaatagc aaaagaaaca
      721 aagaaaaaac tttacaaaat cttagcaacc aatttatatg tttttgcgtg gcaagattct
      781 gatttgactg gagaaccatg tcatgtagct gaacataggc ttggtgtgaa tcctaatatc
      841 ccaccagtat tgtaa
//
LOCUS       XM_071831991            1023 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841792), mRNA.
ACCESSION   XM_071831991
VERSION     XM_071831991.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1023
                     /gene="LOC139841792"
                     /note="uncharacterized LOC139841792; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841792"
     CDS             1..1023
                     /gene="LOC139841792"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688092.1"
                     /db_xref="GeneID:139841792"
                     /translation="MNNESEYEALLSRMCIVQQLGIKCLDAYVDSQLMANQVPRGQNK
                     KAYALSKLVALAFDNLHKNVWVEELTQKSIDEKSTVAPIEEESLNRMTPILKFLIEGM
                     LPTDEKEERKVHMKAPIEIHEGYCALHSDYRTIAAKVMRIWYYWPTIHKDSAEVVRTC
                     QSCQQHAPISRSPRHPMIPITVAWPFCKWSIDIVGPITECSGGIKFLVVAIDYFTKWV
                     ESKALVTITTRRIRNFFWEDIVCSLVYGTEAIIPAEILVPTKRVQSFDESSNGEGLRA
                     NLDMLEEHREIAAIQEAMNKHKISKYYDMRVKPLSFKVGEYVWRNNEASRAEDTGKFG
                     PNWECP"
     misc_feature    <4..156
                     /gene="LOC139841792"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    358..504
                     /gene="LOC139841792"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgaacaatg aatcagaata tgaagcacta ttatcaagaa tgtgtatagt gcagcagttg
       61 ggtattaagt gtttggatgc atatgttgac tcacaactca tggcaaatca agtacctagg
      121 ggtcagaata agaaagcata tgcgctcagc aagttggttg ctttagcctt tgataatttg
      181 cacaaaaacg tatgggtgga ggaattgacg cagaagtcta tagatgagaa gtctaccgtc
      241 gcacctattg aggaggaaag cctaaacagg atgacaccta tactcaagtt tttaatagaa
      301 ggaatgctcc ctacagatga aaaggaagag agaaaggtac acatgaaagc gcccatagag
      361 attcatgaag ggtattgcgc tctacactcc gactatcgga ctatagccgc caaggttatg
      421 cgcatttggt attactggcc caccattcac aaagattcag ctgaggttgt gagaacgtgt
      481 caatcatgcc aacaacacgc gcccatcagc agatcaccac gacatcctat gataccaatc
      541 acggtagctt ggccattctg caagtggtcc atcgacattg tcggccctat taccgagtgc
      601 tcagggggaa tcaaattctt ggtggtagca attgattact tcactaaatg ggtggagtcg
      661 aaagcattgg tgacaattac taccaggcgc attcgcaact tcttttggga agatattgtg
      721 tgcagcttag tttatgggac tgaagctatt atccctgcag aaatactggt acccacgaag
      781 agagttcaaa gttttgatga gtcaagcaat ggtgaaggct tgcgcgctaa cctagacatg
      841 ctagaggagc acagagaaat tgcagctata caagaagcca tgaacaagca taaaatctcc
      901 aagtattatg atatgcgcgt caagccattg tcattcaaag tgggagagta tgtgtggcgc
      961 aataatgaag caagccgagc agaggatact ggaaagtttg ggcccaattg ggaatgtccc
     1021 tag
//
LOCUS       XM_071831992             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00310-like (LOC139841793), mRNA.
ACCESSION   XM_071831992
VERSION     XM_071831992.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139841793"
                     /note="uncharacterized mitochondrial protein
                     AtMg00310-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841793"
     CDS             1..570
                     /gene="LOC139841793"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00310-like"
                     /protein_id="XP_071688093.1"
                     /db_xref="GeneID:139841793"
                     /translation="MGIIKIAWVKWDLILASHEKGGLGIGSLNSFNLSLLLKWRWRLV
                     NNPNALWVRVIKEIHGPESGFAGPGCYTKGLWYDIVSFITMRQSQNVIDLNTLTRVIG
                     NGMSTRFWQDVWIGNESLATRFNCLYRLDTRPNRTISDRFNSSSFSWEWLRNPPLSCN
                     LHQLVSDLASVHLRSADDSWQWNLEPDGV"
ORIGIN      
        1 atggggataa taaagatcgc ctgggtcaaa tgggacctca ttcttgcttc tcatgaaaag
       61 ggtggtctcg ggattggaag ccttaattct ttcaatttat cgcttctctt gaaatggcgt
      121 tggcgtcttg ttaataatcc aaatgccttg tgggttcgtg tgatcaaaga aattcacggt
      181 cctgaatcag gatttgcggg tcctggatgt tacactaaag gcctttggta tgatattgtt
      241 tcgtttatca cgatgcgaca gtcacaaaat gttattgatc ttaacaccct gactcgagtt
      301 atcggtaatg gaatgtcaac acgattttgg caagatgttt ggattggaaa tgaatctctt
      361 gccactcgat ttaattgtct ctaccggttg gatactaggc caaaccgtac gatatcggac
      421 aggtttaata gctcttcttt ttcttgggag tggcttcgta atcctccgct ttcttgcaat
      481 cttcatcagc tagtctctga tcttgcatcg gttcatctga gaagtgctga tgattcgtgg
      541 cagtggaatc tagaacctga tggtgtgtaa
//
LOCUS       XM_071831993             781 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides AP-2 complex subunit sigma
            (LOC139841794), mRNA.
ACCESSION   XM_071831993
VERSION     XM_071831993.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..781
                     /gene="LOC139841794"
                     /note="AP-2 complex subunit sigma; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139841794"
     CDS             117..545
                     /gene="LOC139841794"
                     /codon_start=1
                     /product="AP-2 complex subunit sigma"
                     /protein_id="XP_071688094.1"
                     /db_xref="GeneID:139841794"
                     /translation="MIRFILLQNRQGKTRLAKYYIPLEESEKHKVEYEVHRLVVNRDP
                     KFTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLEGIHLFVEILDHFFSNVCELD
                     LVFNFHKVYLILDEFILAGEFQETSKKAIIERMGELEKLE"
     misc_feature    117..539
                     /gene="LOC139841794"
                     /note="AP-2 complex subunit sigma; Region: AP2_sigma;
                     cd14833"
                     /db_xref="CDD:341437"
     misc_feature    order(117..119,168..170,174..176,249..263,294..296,
                     336..353,357..365,369..374,381..383,417..419,426..431,
                     435..440,447..452,459..461,471..476,480..506,525..530,
                     537..539)
                     /gene="LOC139841794"
                     /note="AP-2 alpha interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:341437"
     misc_feature    order(123..125,177..179,183..185,192..197,204..209,
                     267..269,273..278)
                     /gene="LOC139841794"
                     /note="AP-2 mu interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:341437"
     misc_feature    order(141..146,159..161,300..311,378..383,390..392,
                     405..419)
                     /gene="LOC139841794"
                     /note="dileucine motif interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:341437"
ORIGIN      
        1 gtaaagtcaa aattggtcaa aaacttcaaa ccttcaaacc tctttcaatt attttgcaga
       61 atcattagaa acagctcgtc gatccttttc cttcgtattg cttaactcgc acgaaaatga
      121 tccgattcat tttgctacaa aacaggcaag ggaagactcg tttagctaag tactacatcc
      181 ctctcgaaga atctgaaaag cataaggttg aatacgaggt tcatcggttg gttgtaaaca
      241 gagatcctaa atttactaac tttgttgagt tccgtacaca caaagttatc tacaggcgat
      301 atgctggact atttttctca ctttgtgttg atataaccga taatgagcta gcatatttgg
      361 agggcatcca cttatttgtt gaaatacttg atcacttctt cagtaatgta tgcgaactag
      421 atttggtttt caactttcat aaggtttacc tgatattaga cgagttcatt cttgctggag
      481 agttccaaga aacaagcaag aaggcaatca ttgagaggat gggagaattg gaaaaactgg
      541 agtgaaatgc agattctgat ggcttatttg ttcgataatc aagcatggct tccgttctag
      601 tcttttatct gaatctcata tcgttaccat cgttttggtc atgagttatt ttatttccat
      661 cattcatagt cgataaatat cttttcattc tgcatttctt gattgtaact gatttaatta
      721 gaccatttta cctttgatga ttgtaaataa aatgttgtat acagtgatga atacaaacac
      781 t
//
LOCUS       XM_071831994            1653 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841795), mRNA.
ACCESSION   XM_071831994
VERSION     XM_071831994.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1653
                     /gene="LOC139841795"
                     /note="uncharacterized LOC139841795; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841795"
     CDS             1..1653
                     /gene="LOC139841795"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688095.1"
                     /db_xref="GeneID:139841795"
                     /translation="MVVEELISDKKIPAAGTTKRTGFELFLSCSSKKAAVWGRKQQQI
                     ATVGGGLGCPKMQQTRHKLKDLSWLKAKSPNYGKVKVMEGYLEYADRENGKIDASLSH
                     GYLRSCPSSSGSGRFIGSRSGNRLVKPVRIRAGSWNVGILTGKRFELVETLRKHKVDI
                     LCVQDTRWKVRGAVKIKDYKLWFLGSRVARNGVGIIIGPPHNENVVEVNRRGDRIMSV
                     RLVIQEVTYTVISAYAPHVGLDVAEKRLFWESLDEVVRMCPSDHRLLIGGDLNGHIGT
                     NVEGYLGAHGGFGYGVRNEEGLSILDFDVAHDLVVANLFFKKTNAQLATFHSGGNSTQ
                     IDYLLLRRGDLRTCGDSKALTDLTCSSQHRLLVMDLILRRRVTMSVRPVQPTILWKKL
                     NGEKAETFKTLVVERVEAEVEMVSHEYADQMWNCLASTIRETAKEALGVAGTPAGRTR
                     VEERYKEAKREAKKTIARAKDKAYEDLYRKLDSKEGANDIYRIAKARERRLRDLDNIK
                     FIKNEVGQTLVKEDEIRKRWEEYFSSLFAGGRPECLEDPQES"
     misc_feature    403..1110
                     /gene="LOC139841795"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(412..414,493..495,697..699,805..807,811..813,
                     1006..1008,1084..1089)
                     /gene="LOC139841795"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(493..495,1084..1086)
                     /gene="LOC139841795"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(697..699,811..813,1087..1089)
                     /gene="LOC139841795"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atggtggtgg aagaacttat cagcgacaaa aaaatcccag cagcaggaac aaccaaacga
       61 acgggttttg aactgttttt gtcgtgcagc agcaaaaagg ctgcagtttg gggtcgaaaa
      121 cagcagcaaa tagctactgt tggtggcggt ttgggctgcc caaaaatgca gcaaacaagg
      181 cataagttga aagatcttag ttggctaaag gctaaaagtc ctaattacgg aaaggtaaaa
      241 gtgatggagg gatatctgga gtatgcagat cgggaaaatg gtaagataga cgctagtctt
      301 tctcatggtt acctgaggtc atgtccttcg agctctgggt cgggtaggtt tataggatct
      361 agaagcggca ataggttagt gaagccggtt aggattagag cgggtagttg gaatgtgggt
      421 attttgaccg gcaaacgttt tgaactagtg gagactttac gtaaacataa agtggacatc
      481 ttatgtgttc aagacactag atggaaggtt cgaggggcgg ttaagatcaa ggactacaag
      541 ctatggttct tgggatcgag agtagctaga aacggtgttg gaattattat tggtccaccc
      601 cataacgaga atgtcgtgga agtgaacaga cggggcgata ggattatgtc ggttaggttg
      661 gtaatccagg aggtgaccta cacggtcatt agtgcttacg cacctcatgt gggccttgac
      721 gtagctgaaa agagactatt ctgggaatcg ttagacgagg ttgtgaggat gtgcccttcg
      781 gaccatcgat tacttattgg gggagaccta aatggtcata taggaacgaa tgtcgagggt
      841 tatctggggg cccatggggg ctttgggtac ggagtaagaa atgaggaagg gctctctatt
      901 ctcgattttg atgttgctca cgatttggtt gttgcgaatt tgttcttcaa gaagacgaat
      961 gctcagttag caacctttca tagcgggggt aatagtaccc agattgacta tttattactt
     1021 cgcagagggg atcttaggac atgtggggac agtaaggccc tgactgactt gacatgctcc
     1081 tcccagcaca gattgttggt catggatttg attctccgga gacgggtcac catgagtgta
     1141 aggcccgtcc aacctacaat cctatggaag aagttgaacg gagagaaggc agagactttt
     1201 aagactttag ttgtagaaag agtggaggca gaagtggaaa tggtatctca tgaatatgcg
     1261 gaccagatgt ggaattgtct agcgtccacc attagagaga cagccaagga agccttgggt
     1321 gtggcaggga ccccggcggg tagaactagg gttgaagaga gatataaaga agctaaaaga
     1381 gaagctaaga agaccatagc acgtgcaaaa gataaggcat acgaagattt gtataggaaa
     1441 ctagactcca aagaaggagc taatgatatc tacaggatag ccaaagctag ggagcgaagg
     1501 ctcagggacc tagataacat aaagtttata aaaaatgaag ttggtcaaac cttagtaaag
     1561 gaagatgaaa ttcggaaaag atgggaagaa tacttctcat cccttttcgc cggaggaaga
     1621 cctgaatgtc ttgaagaccc gcaagaatct tag
//
LOCUS       XM_071831995             888 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841796), mRNA.
ACCESSION   XM_071831995
VERSION     XM_071831995.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..888
                     /gene="LOC139841796"
                     /note="uncharacterized LOC139841796; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139841796"
     CDS             1..888
                     /gene="LOC139841796"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688096.1"
                     /db_xref="GeneID:139841796"
                     /translation="MVFLDLEKAYDYVPRNLIWKILRGRNIPSRYISVIRDMYEGAKS
                     CVRTPVGNTEVFPIEVGLHQGSALNPFLFALILDELSRAIQECISWCLIFADDIVLVF
                     ESNEELNRRLEQWRVALEGNGLQISRQNTEYLRCDFYRNTDEQDDGVNIYIRDQILHP
                     QTSFRYLGSMLHKSRRIDEDVSHRIKVGWLKWRAATGALCDRKIPLKLKGKFFKDPFL
                     VLGMNVCSGKFVLYGGLLVCMYVSVFVGMFICTHCSISRYVWSPAQLPMSTISKSSSG
                     CPAYKSGSNSVSKRKSNGI"
     misc_feature    <1..513
                     /gene="LOC139841796"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(13..30,190..195,280..282,286..291,499..504)
                     /gene="LOC139841796"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(13..30,190..192,286..288)
                     /gene="LOC139841796"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    193..195
                     /gene="LOC139841796"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggtattcc tagacttgga aaaggcctat gattacgtcc cacgaaattt gatttggaag
       61 atccttagag gtagaaatat cccgagtaga tatattagtg ttattaggga tatgtacgaa
      121 ggggcgaagt cttgcgttcg aacgccggtg ggaaatacag aagttttccc aatagaagta
      181 ggcctgcatc agggatcggc ccttaaccct tttcttttcg ctttgatcct tgatgagctt
      241 tctcgagcga tacaagagtg tatctcttgg tgcctaattt ttgccgatga tattgtgctt
      301 gttttcgaat ctaatgagga acttaataga agattggagc aatggagggt agccttagaa
      361 ggtaatggtc tacaaattag tagacaaaat acggaatatc ttagatgtga tttttataga
      421 aacaccgatg aacaagatga tggggtgaac atctacatta gagaccagat cttgcatcca
      481 caaacttcgt ttaggtactt aggctcgatg ctccacaaat cgaggaggat agatgaagac
      541 gtgtctcacc gtattaaagt agggtggttg aagtggagag cagcgactgg agccttatgc
      601 gacaggaaga tccccctaaa gctgaaaggg aaattcttca aggacccctt cttggttttg
      661 ggtatgaatg tgtgttcagg taagtttgtg ttgtatggag gtttgttagt gtgtatgtat
      721 gtttctgtct ttgtgggtat gtttatatgt acgcattgta gcatttctcg ttatgtctgg
      781 agccctgccc agttgcctat gagcactatc agcaagtcct cgagtggttg tcccgcatac
      841 aaatcagggt ctaatagtgt gtctaaacgt aagtctaatg gtatctag
//
LOCUS       XM_071831996             417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841798), mRNA.
ACCESSION   XM_071831996
VERSION     XM_071831996.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139841798"
                     /note="uncharacterized LOC139841798; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841798"
     CDS             1..417
                     /gene="LOC139841798"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688097.1"
                     /db_xref="GeneID:139841798"
                     /translation="MWGKKNTDTFLKNTKTSFVDSEGWTIREVEYVKSTPQCKFNPHR
                     RLRDPGEFLVLCRFWNEKTYSALLDSGASVNMMPVKIAKSLGIRELICTNTSIYFGNQ
                     TVDSPIGIEIDVPINIHGVNFDEDFFIMDCAPEEKH"
     misc_feature    172..393
                     /gene="LOC139841798"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(205..207,211..213,217..219,289..297)
                     /gene="LOC139841798"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    205..213
                     /gene="LOC139841798"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    205..207
                     /gene="LOC139841798"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(289..300,310..321)
                     /gene="LOC139841798"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgtggggta agaaaaatac ggacacgttc ttaaaaaaca caaaaacttc atttgttgat
       61 agtgagggtt ggacgatcag agaggttgag tacgttaagt ctacaccaca gtgtaaattt
      121 aatcctcata gaagacttag agatccgggg gaatttttgg tcctatgtcg gttttggaat
      181 gagaagactt actcggcatt attagattca ggtgcgagtg ttaatatgat gccggttaag
      241 attgcaaagt cgttgggaat tcgggagtta atttgcacta atacaagcat ctattttggg
      301 aaccaaactg ttgatagccc aataggaatc gagatagatg tccctattaa tattcacggt
      361 gttaactttg atgaagattt cttcataatg gattgtgctc cggaggagaa acactga
//
LOCUS       XM_071831999            1206 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841799), mRNA.
ACCESSION   XM_071831999
VERSION     XM_071831999.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1206
                     /gene="LOC139841799"
                     /note="uncharacterized LOC139841799; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841799"
     CDS             1..1206
                     /gene="LOC139841799"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688100.1"
                     /db_xref="GeneID:139841799"
                     /translation="MAHPPKNLPPKGEFPKGLKIGNDNLVVTHLQYADDTIFFGEWNK
                     RNAKSISKLLKCFENISGLKVNFHKSKLYGIGTSTSETNHMASYINCSAGSTPFTYFG
                     LPIGVSTSHSSSWQPIVEKFDKRLSDWAAKYISFAGRLTIIKSILSSHTIWKEIIKAE
                     KIADNLGSSFSSSISKCIGNGTTISFWHDTWIGSDILKSLFYRFYMLDSHKDASVAER
                     ISTINSTSVGNWNWTRSPSGRSLDDLMELNNLISTVSLSGRPDSWKCSLDPSGIFTTY
                     SLSKLINSLKYGIHSKSLSPSRNKFVPQKIFIFSWRVIQQKIPVRYELDKKGIDLHTI
                     LCPLCDQHIETIEHVLVNCHKANSIWSQLLVWWNQNNTLISNINDAIIYDQGFTHNSI
                     GSSLLQATK"
     misc_feature    <43..315
                     /gene="LOC139841799"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    <895..1077
                     /gene="LOC139841799"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggctcacc caccaaagaa tttacctccg aaaggggaat tccccaaggg tctaaaaatc
       61 ggcaacgata acctcgttgt cactcatctg caatacgcgg atgatacaat cttttttgga
      121 gaatggaaca aaagaaatgc aaagtccatc tccaaactct taaaatgttt cgaaaatatt
      181 tctggactta aagtcaattt ccacaaaagc aaactctacg gtattggcac atccaccagt
      241 gaaactaacc atatggccag ttacataaac tgttccgcag gatctacccc gtttacttat
      301 ttcggtctcc ccataggtgt ttccacatct cactcatcat cttggcagcc gatagttgag
      361 aagttcgaca aaagactctc ggactgggcc gccaaataca tctccttcgc tggacgtctc
      421 acgattatta aatctatact atccagtcac accatatgga aagagattat caaagctgaa
      481 aaaattgctg acaacttagg atcctccttc tcatcttcaa tctctaagtg cattggtaat
      541 ggcactacca tcagtttctg gcacgataca tggattggtt cagacatcct caaatcactc
      601 ttctatagat tttacatgtt agactcccac aaagacgcat cggttgctga aagaatctcg
      661 accatcaact ctacatcggt cggaaattgg aattggaccc gatcaccgag cggtcgatca
      721 ttagatgacc tgatggaact aaataatcta atctcaactg ttagtctctc cggccgtcct
      781 gactcatgga aatgctctct cgacccttcc ggcattttca caacttattc tttgtcaaag
      841 ctgatcaatt ccttaaaata tggtatccac tcaaaaagcc tatcgccctc tcgcaacaaa
      901 ttcgtccctc aaaaaatatt catattctca tggagagtca ttcaacaaaa aatcccggtg
      961 agatacgaac tcgacaaaaa aggaatagac ctacacacca ttttatgccc tttatgcgat
     1021 caacatatcg aaaccattga acatgtgttg gtaaactgcc acaaagcgaa ttcaatttgg
     1081 tctcaattgt tagtttggtg gaatcaaaat aatacattaa tatccaacat caatgacgcc
     1141 atcatttatg atcaaggctt cacacataac tccataggat cttccttatt gcaagctact
     1201 aaatag
//
LOCUS       XM_071832000             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841800), mRNA.
ACCESSION   XM_071832000
VERSION     XM_071832000.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139841800"
                     /note="uncharacterized LOC139841800; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841800"
     CDS             1..567
                     /gene="LOC139841800"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688101.1"
                     /db_xref="GeneID:139841800"
                     /translation="MSSPSQAETKNRTANYAIMEPMPERRHVNGTRLIITDFQKFVLQ
                     ARIITGSHIGKTVIIPRIVLTSTQTKWSFVMRRIQFPVRPCYAMTINKSQGQSLKFVG
                     LYLPKPVFSHGQLYVSLSRVTDPSGLKIVMVDDTDEHLKGHTRNVTGFAISSSLAAQQ
                     LKVETIQDAIPGERATFNIPFTFVDIKD"
     misc_feature    <256..384
                     /gene="LOC139841800"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    283..285
                     /gene="LOC139841800"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atgagttccc cctcacaggc tgaaactaaa aataggacag ctaattatgc tattatggaa
       61 cctatgcccg agcgcaggca tgttaatgga acacgcctca tcataaccga cttccaaaag
      121 tttgttctcc aagctcgaat aatcactggc tctcatatag gaaaaacggt cataatacca
      181 agaattgtcc tcacttctac acaaacaaag tggtcgtttg tcatgcgacg aatacaattc
      241 ccggtcagac catgttacgc aatgacgata aacaaaagcc aaggtcagtc gttaaaattc
      301 gttggcctct atctccctaa acctgtattc agccacggtc aactatacgt atcactttca
      361 agagtcactg accccagtgg gctgaaaata gtaatggtag atgacaccga tgagcatttg
      421 aagggccaca caagaaatgt cactggcttt gcaatttctt caagtttagc tgcacaacaa
      481 ttgaaagtag aaacgatcca agatgctata ccgggagagc gagccacttt caatatccct
      541 tttacttttg tagatatcaa ggattga
//
LOCUS       XM_071832001            2220 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841801), mRNA.
ACCESSION   XM_071832001
VERSION     XM_071832001.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2220
                     /gene="LOC139841801"
                     /note="uncharacterized LOC139841801; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139841801"
     CDS             1..2220
                     /gene="LOC139841801"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688102.1"
                     /db_xref="GeneID:139841801"
                     /translation="MALQYPLLFPYAKTGYHEEIPYHNNTGRRQTNRGHYLVDAYTAV
                     EEQRLKWLHHHQNELRIDLYNNVCDAITRGDTSAASIRKRIILPSSHTGSPRYMVQNY
                     QDAMALCREYDNPDLFITITSNPRWPEIVTMLCYIEGLRSPDRSEIVARTPSDIDDLI
                     SAEIPSQINDPEGFRVVTEYMLHGPCGGTHMDAPCIIEKQCSKHFPKPYYAETTIDEE
                     GYANYRRRNNGVRFKKKQHSTRQQLCGPVQQISTSKIQCPYKCGVVQYISGNQILIQI
                     LEQRAGPRNNSDTRKYDSQRKWTQAITEVTLWASGLQLRELLVTIILFCNIKNYCLAE
                     IQGILNKKGKSLDDYPELAQPDPSMLTHMDNRLIREELNYNIKDMHILHESLFSSLNP
                     EQLAIYHQKKGAFSLMWPWLQWEKIRLSSCNPEKRRVFFFLYGPGGTGKTFLYTAVLA
                     KLRAKRKIVLAVAPSGIASLLLPGGRTAHGRFVIPLELMENSTFGIKQKTYLAALIQE
                     VSLIIWDEAPMTQRFAFEALDKTLPDILGAKDDVNRLKLFGGMPILLGGDFRQILPVI
                     LKGKRQEVIHACINRSDLWHHCQLHTLSRIMRVNEYSADGAHDTQKHAFNKWVLDVGE
                     AKVPTRCKDREDEPTWIKIPDEFVVRSEKPPIEAIVDTIFQDFTVRQEDEEYLHERAI
                     LTPRNDDATQINKHMFKILEGASMTFKSSDEICKGSTDNIDQHHAYPVEFLNKLNFP"
     misc_feature    130..>483
                     /gene="LOC139841801"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    1168..2217
                     /gene="LOC139841801"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(1309..1329,1543..1545)
                     /gene="LOC139841801"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atggcattac aatacccatt actttttccc tacgcgaaaa ctggctacca tgaagaaata
       61 ccatatcaca ataatactgg aaggcgacaa acaaaccgcg gtcactactt ggtggacgct
      121 tatacagctg tagaagaaca acggttgaaa tggctacacc atcaccaaaa tgaacttcgc
      181 attgacctat acaataatgt ttgtgatgct atcacaaggg gcgacacatc ggctgcttca
      241 atcagaaagc gaataatttt accatcttcc cacacaggta gtccgcgata tatggtgcaa
      301 aactaccaag acgcgatggc tttatgtcgg gaatatgaca atccagattt attcatcacc
      361 atcacttcta accctaggtg gcctgaaata gtgactatgc tctgctatat tgagggtctg
      421 agatcaccag accgctcaga aattgtcgct aggacaccgt ctgacattga tgaccttata
      481 tcagcagaaa taccgtccca aataaacgat ccagaagggt ttagggtcgt aaccgaatac
      541 atgttacatg gtccttgcgg tggaacacac atggatgctc cttgcattat tgaaaaacag
      601 tgttctaagc attttcctaa accatattat gcagaaacaa caattgacga agaagggtac
      661 gctaactaca ggcgtcgaaa caatggggtc agattcaaaa aaaaacaaca ctccactaga
      721 caacagcttt gtggtcccgt acaacagata tctacttcta aaatacaatg cccatataaa
      781 tgtggagtgg tgcaatatat ctcgggcaat caaatactta ttcaaatact tgaacaaagg
      841 gccggaccgc gcaacaatag tgatacaaga aaatatgatt cccagcgaaa atggacacag
      901 gctatcacag aagtgacatt atgggcatca ggcttgcaac tacgagagtt acttgtcacc
      961 attatactct tttgcaacat taagaattat tgcttggccg aaattcaggg catattaaat
     1021 aaaaaaggaa agtcgttaga tgattacccc gagcttgcac aacccgaccc atctatgcta
     1081 acccatatgg acaaccgtct tattcgagaa gagttaaatt ataatataaa agacatgcat
     1141 attctacatg agagcctttt cagctctctc aatccagaac aactagcaat ttatcaccag
     1201 aaaaaggggg ccttttccct tatgtggccc tggttacaat gggaaaagat tcgtcttagc
     1261 agctgtaatc cagaaaaaag gagggttttt tttttcttat atggtcctgg tgggactggg
     1321 aaaacgttcc tatacaccgc tgtcctcgca aaattacgag caaaaaggaa gattgtcctc
     1381 gcggttgcac catcaggtat cgcttccctt cttttacccg gaggacgaac agcccacggt
     1441 cgattcgtga tccccctgga attgatggaa aacagtacat tcggtataaa acaaaagacc
     1501 tacttggcgg cccttattca agaagtcagc ttaatcattt gggacgaagc tccgatgact
     1561 cagagatttg cattcgaggc gttagacaaa accttgccag acattttagg cgctaaggat
     1621 gatgtaaaca gattgaaact ttttggcggt atgcctatct tattgggagg tgactttcgg
     1681 cagatactgc ctgtaatact aaaaggaaag agacaagagg taattcatgc atgcatcaat
     1741 agatcagacc tttggcatca ctgtcaactg catacgcttt cccgtatcat gagagtaaat
     1801 gaatacagtg ctgatggtgc acatgatacc cagaaacacg cattcaataa atgggtcctt
     1861 gatgtaggcg aagctaaggt accaacaagg tgtaaagata gagaagacga accaacgtgg
     1921 ataaagattc ccgatgaatt cgttgtcaga tctgaaaaac ctcccattga agcaatcgtt
     1981 gacaccatat tccaagattt caccgtaaga caagaagatg aggagtactt gcatgaacgt
     2041 gcgatcttga caccacggaa tgatgacgct acccagatta acaaacatat gttcaagata
     2101 ctcgagggtg catcaatgac atttaaaagc tctgacgaga tttgcaaggg ttcaactgac
     2161 aacatcgatc aacaccacgc ataccccgtg gaatttttaa ataaattaaa tttcccatga
//
LOCUS       XM_071832002            1584 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841803), mRNA.
ACCESSION   XM_071832002
VERSION     XM_071832002.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1584
                     /gene="LOC139841803"
                     /note="uncharacterized LOC139841803; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841803"
     CDS             1..1584
                     /gene="LOC139841803"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688103.1"
                     /db_xref="GeneID:139841803"
                     /translation="MDSYSTTSSSTSDPTLTYGYLRSCPPTLEVGRTRGVRSGSRVST
                     LGKTRVGSWNIGTLTGKRIELVDTFLKSNVDIVCVQETRWKGEGAVDIKDYRLWYSGS
                     RIARNGVGIFLGKLHKDNVVDVGRFSDRIMSVSLIIKEETFTVISAYAPHAGLSEAEK
                     KSFWELLDEVVRGCPADHRLIIGGDLNGHIGVEAEGYEGAHGGFGFGPRNEEGRSILV
                     FAIAHELVIANSFFKKRDSQLATFHSGGRCTQIDFLLLRKGELMTCKDCKVLPAFTCS
                     SQHRLLIMDIVTRGRVGRRARVVQHRILWKNLHGAKAETFRATVADRLSVEGDNVAPT
                     NVDQIWNRMTSTIREVAKETLGVTLGTSRAHKSSRESWWLSDDVQTKVALKQMRFREL
                     ITFGEGTSAERTRVEERYKEAKREAKKAVAIAKDKAYEDLYRKLDSKEGANDIYRIAK
                     ARERRGRDLVNVKYIKDEAGQSIVREDLIRKRWEENFSSLFGRDRPERNGELNDEVRE
                     YQNNWFCKRINHEEVRTAL"
     misc_feature    148..858
                     /gene="LOC139841803"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(160..162,241..243,445..447,553..555,559..561,
                     754..756,832..837)
                     /gene="LOC139841803"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(241..243,832..834)
                     /gene="LOC139841803"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(445..447,559..561,835..837)
                     /gene="LOC139841803"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atggattctt attcaaccac atcgtcatcc actagtgacc ctacacttac ttatggttac
       61 ttgaggtcat gtcctcctac tttagaggtg ggtaggacta gaggggttag aagtggtagt
      121 agggtatcca cccttggtaa gactagagtg ggtagttgga atataggaac attgacgggc
      181 aagaggattg agctcgttga tacctttctt aagagtaatg tggacatagt gtgtgttcaa
      241 gagactagat ggaagggtga aggggcggta gatattaagg actataggtt gtggtactcg
      301 ggttctagga tagcacggaa cggggtaggt atctttttgg gaaaactaca taaggataac
      361 gttgttgacg tgggtaggtt tagcgatagg attatgtcag ttagtcttat tattaaggag
      421 gagactttca cggtcattag cgcatacgca cctcatgcag gtttaagtga ggcggaaaag
      481 aagagttttt gggaattgtt agatgaggta gtgagggggt gcccagcgga tcatcgattg
      541 attatagggg gtgatctgaa tggacacata ggagtggagg cagaaggtta cgagggagcc
      601 catgggggct ttgggtttgg tcctagaaac gaagaagggc gctcgattct tgtgtttgcc
      661 attgcccacg agttggttat agcaaactct ttcttcaaga agagggattc tcagttagcc
      721 acttttcata gcgggggtcg ttgcacccag attgactttt tgctccttcg taaaggggaa
      781 cttatgacat gtaaggactg taaggtcctt ccagccttta cgtgctcctc ccagcataga
      841 ttgttgatca tggacatagt cacccgggga agagttggca ggagggccag ggttgtgcaa
      901 catagaatcc tttggaagaa cctacatggt gcaaaggcgg agacttttag agcgactgtt
      961 gctgatagat tgagtgtaga aggggataac gtagctccta ctaacgtaga ccagatatgg
     1021 aaccgcatga catctactat cagagaggtg gcaaaagaaa ctttaggggt gacattaggg
     1081 acatcgagag cccacaagag tagtagagaa tcgtggtggc ttagtgatga tgtccaaacg
     1141 aaagtcgcgt taaagcagat gaggtttagg gagctcatta cctttggaga agggacgtct
     1201 gcagagagga ctagggtaga agaaagatat aaagaagcta aaagggaagc aaagaaggcc
     1261 gtagcaattg caaaagataa agcttatgaa gatttatata ggaaactaga ctccaaggag
     1321 ggagccaatg acatatatag aatagctaaa gctagggagc gaagaggcag ggacttagtt
     1381 aacgtcaaat atatcaagga tgaagcaggt caaagtatag tgagagaaga cctcattagg
     1441 aaaagatggg aagagaattt ttcatccctt ttcggtaggg atagacctga gcggaacggg
     1501 gaactcaacg atgaggttcg tgaatatcaa aacaactggt tttgcaagag gattaaccac
     1561 gaggaagtga gaacggcctt atga
//
LOCUS       XM_071832003             378 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841804), mRNA.
ACCESSION   XM_071832003
VERSION     XM_071832003.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..378
                     /gene="LOC139841804"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841804"
     CDS             1..378
                     /gene="LOC139841804"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688104.1"
                     /db_xref="GeneID:139841804"
                     /translation="MATPMATNAKLTLEEEGESFDSTKFQENPKTSHVEAVKRIVRYL
                     KGTMHLGLWHPKFTGVDIMRFSDSDHEGSLIDRKSTSDVCAFVDLYLTSWFLKKQTSV
                     ALSTTEAKYVSVGRACAQVLWMK"
     misc_feature    193..>375
                     /gene="LOC139841804"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggccactc ctatggccac taatgcaaag cttactctcg aagaagaagg agaatcattt
       61 gatagcacca aattccaaga gaatcccaaa acatcacatg ttgaagcggt taaaagaatc
      121 gttagatact tgaaaggtac tatgcatctt gggctatggc acccaaagtt caccggtgtt
      181 gacattatgc gcttttcgga ttccgaccat gaagggtcat tgattgatcg aaagagtaca
      241 agtgatgtat gtgcatttgt tgatctttac ttgacatcat ggttcttgaa gaaacaaaca
      301 tccgttgcac tatccactac tgaagcgaaa tatgtttctg tgggaagagc atgtgcacaa
      361 gtgctatgga tgaaataa
//
LOCUS       XM_071832004            1356 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841805), mRNA.
ACCESSION   XM_071832004
VERSION     XM_071832004.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1356
                     /gene="LOC139841805"
                     /note="uncharacterized LOC139841805; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841805"
     CDS             1..1356
                     /gene="LOC139841805"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688105.1"
                     /db_xref="GeneID:139841805"
                     /translation="MPPKQVSQADVRRWITEGLTEAVAELRNGTNSNNVNTTNQQNQD
                     TSNTQNNGQAGCTYKTFSSCEPSSFNGTEGLVGLTRWFEKLESVFRISGCRDADRTKF
                     TTSKLSDGALTWWNTYANSVGMDQAFETPWEDLKRRMIAEYCPYTKTVKMEQELQNLK
                     LVGNDLTSYNKRFFELALMCPHMVTPERRKITLYANGLTDKIQSGVTTSKPRTIQEAV
                     EMASELIDQVEQRGKTPASNETKTHDNKRKWNRNNNSGKNYNQQPFKKQDTTKNNAAT
                     SSANSGYKGKFPLCVKCNRHHPGDCLKKCDKCKRNGHLAAECKIGTNMCYGCGKEGHF
                     RKDCPTASKANEPKAIRIPVAEGEPLMVYGERNNMLLHFINCLEVQKHMRKGCLAMLV
                     HVSKTESEGKRLEDVPIVREFPDVFPDELPGLPPPRDVEFQIDLVPGAAPVARAPGGL
                     D"
     misc_feature    301..600
                     /gene="LOC139841805"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <868..1032
                     /gene="LOC139841805"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 atgccgccca agcaagtttc ccaagcagat gttcgtcggt ggattactga aggactgacc
       61 gaggccgtgg cagaactccg taatggaacc aacagcaaca atgtgaacac tacgaatcag
      121 caaaaccagg atacgtccaa tactcagaac aatggacaag cagggtgtac gtacaagacc
      181 ttctcgagtt gtgaaccaag ctcctttaat ggtactgaag gtctagttgg tttgactcgt
      241 tggtttgaga agctcgagtc agtcttccgt atcagtggtt gtagggatgc ggatagaacg
      301 aagttcacaa cttctaagtt atcagatggc gccttgacgt ggtggaatac gtatgcaaac
      361 tcagtaggta tggatcaggc ttttgagact ccatgggagg atttgaaacg acgaatgatc
      421 gcagagtatt gtccctacac taaaactgtt aagatggagc aagaactcca gaacctgaag
      481 ttagtgggta atgatttgac tagttacaat aagagattct ttgagcttgc tctcatgtgt
      541 ccacatatgg ttactcccga acgtcgcaag atcactcttt atgcgaacgg tttgaccgat
      601 aaaattcaaa gtggtgtgac tacttcgaag ccgagaacta tacaagaagc tgtcgagatg
      661 gctagtgagt taattgatca agttgaacag cgagggaaga ctcctgcctc aaatgagact
      721 aaaactcatg ataataagag gaaatggaac cgtaacaata attcagggaa gaattacaat
      781 caacagccct ttaagaaaca agatactact aagaataatg ctgcaacctc aagtgctaat
      841 tctggttata agggaaagtt ccctttgtgt gttaagtgta ataggcatca tccgggggat
      901 tgtttgaaaa agtgtgataa gtgcaagagg aatggacact tggctgccga gtgtaaaatt
      961 ggtacgaata tgtgttatgg gtgcggaaaa gaaggtcatt tcaggaagga ttgcccaact
     1021 gctagtaagg ctaatgaacc taaagcgatt cgcattcctg ttgctgaagg tgaaccttta
     1081 atggtgtatg gagagcgaaa caatatgctg ttacatttca ttaattgttt ggaggtgcag
     1141 aaacacatga gaaaaggttg tcttgctatg ctagttcacg taagcaaaac tgaatcggaa
     1201 ggtaagagac ttgaagatgt acccattgtt agagaatttc ccgatgtttt tccagatgag
     1261 ttacccggat tacctccgcc tagagatgta gaattccaga ttgatttagt tcccggagcg
     1321 gcacctgtag cgcgtgcacc tggtggatta gattaa
//
LOCUS       XM_071832005             789 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides MADS-box transcription
            factor 23-like (LOC139841806), mRNA.
ACCESSION   XM_071832005
VERSION     XM_071832005.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..789
                     /gene="LOC139841806"
                     /note="MADS-box transcription factor 23-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139841806"
     CDS             1..789
                     /gene="LOC139841806"
                     /codon_start=1
                     /product="MADS-box transcription factor 23-like"
                     /protein_id="XP_071688106.1"
                     /db_xref="GeneID:139841806"
                     /translation="MGRGKIEIKKIENVSTRQVTFSKRRSGLIKKAHELSVLCDAEVG
                     IIVFSNTGRLYEFCSSSMSGIIDRYNRANEPSTSLIQAEMRQEQAELELLRNEVRRLK
                     HENARLMGNNLGGASVQELHQLQQQLTDGLMSVKEKKDALLFEEIDRSNRKERELDYE
                     NDILRGEIKKLRQLLPFAQQPTQSGFIEFTPATVPTTSDAGHSKHDQVSPDTVCYYGS
                     DNTDSETALQLRLECGDHSKKDAVLPKRENISSSCASDEMDQSS"
     misc_feature    4..234
                     /gene="LOC139841806"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; Region:
                     MADS_MEF2_like; cd00265"
                     /db_xref="CDD:238165"
     misc_feature    order(4..12,16..18,22..24,37..39,43..45,55..60,67..72,
                     76..81,88..93,97..102,112..114)
                     /gene="LOC139841806"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     misc_feature    order(61..63,82..87,94..99,103..108,115..117,130..132,
                     136..138,142..144,160..162,166..168,184..186,193..198,
                     205..207,214..219)
                     /gene="LOC139841806"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238165"
     misc_feature    175..177
                     /gene="LOC139841806"
                     /note="putative phosphorylation site [posttranslational
                     modification]; other site"
                     /db_xref="CDD:238165"
     misc_feature    241..507
                     /gene="LOC139841806"
                     /note="K-box region; Region: K-box; pfam01486"
                     /db_xref="CDD:460228"
ORIGIN      
        1 atgggtagag gaaagattga aatcaagaaa attgagaatg taagtacaag acaagttact
       61 ttttcaaaga ggcgttctgg gctgataaag aaagctcatg agctttctgt gctttgtgat
      121 gctgaagttg ggattattgt gttttcaaat actgggcgtc tttatgagtt ctgcagttct
      181 agcatgagtg gaataattga ccgctacaac agagcgaatg agccatccac atcactaata
      241 caggctgaga tgaggcaaga acaagcagag ctagaacttc tgagaaatga agtgagaaga
      301 ctcaaacatg aaaatgcgag gttaatgggt aataatcttg gtggcgcgag cgtgcaggaa
      361 cttcatcagt tacagcaaca gctcactgat ggtttaatgt ctgtcaaaga aaaaaaggat
      421 gctttgctgt ttgaggagat cgatcgttca aatcgtaagg agcgagagct tgattatgaa
      481 aatgacattc ttcgaggaga aattaaaaag ttaaggcaac ttttgccgtt tgctcagcaa
      541 cctacacaat caggtttcat agaatttact cctgctacgg tgccaactac aagtgatgct
      601 ggccattcta aacatgacca agtcagccca gataccgtct gttattatgg atccgataac
      661 accgattcag aaacagcact tcagttgagg ctagaatgcg gggaccactc gaaaaaggat
      721 gccgtgttgc caaagaggga aaatatatcg agtagttgtg cgagtgacga gatggatcaa
      781 tcatcatga
//
LOCUS       XM_071832006             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841807), mRNA.
ACCESSION   XM_071832006
VERSION     XM_071832006.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139841807"
                     /note="uncharacterized LOC139841807; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841807"
     CDS             1..504
                     /gene="LOC139841807"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688107.1"
                     /db_xref="GeneID:139841807"
                     /translation="MSLVDYTSSSDEEEAATVAGGCKANLVISHTKPSNEKSTSLPAQ
                     QSKKDTLETSTIKLPDASLLFNSPSMQANMSESYDHNSRVSSAMAQNASRKRDAKYSV
                     LAFNSRGKVPKGNLPRSKNVSQTPGGLLCPPQLSGRSNVVTEDINKLFTGRNGSSSNK
                     PLTSSES"
ORIGIN      
        1 atgtcgctgg tagattatac ttcatcatcg gatgaagaag aagcagcaac agttgcaggt
       61 ggctgcaagg ctaatcttgt aatttcacac acgaagccgt ccaatgagaa atcaacaagc
      121 ttaccagccc aacaatctaa aaaagatact ctggagacgt ctactattaa attacctgat
      181 gcatcacttt tatttaattc accttctatg caagccaata tgagtgaaag ttatgaccat
      241 aattctcgag tttcatcagc tatggctcaa aatgcgtcac gtaaaagaga tgctaaatac
      301 tcggtactag cttttaattc tcgtggaaaa gttcctaaag ggaacttacc tcgttcgaag
      361 aatgtttcgc agacacctgg tggcctgctt tgtccacctc agcttagtgg aaggagcaat
      421 gttgtaacgg aagatataaa caagttattt accggtcgaa atggatcctc gtccaacaaa
      481 cctttaactt caagtgaaag ttagctcgtt cttatgtgat ttactttcct tctaatgtgt
      541 ttgataatgt tgatttcgat tttcttagaa gtctctagcg gttacttaat gactgtcaag
      601 aatagatttt gattatgtta ataacttctg cagatttata gaaagctaat tgttatcttt
      661 gacatgttgc aatgacatag tactccccat actatcatat ctggtctcct ttttgcttaa
      721 tcacgcgcgt atggagtatt catgatctgt gtatacatgg tgtagattat acaggtaata
      781 ctgctgttaa cggaa
//
LOCUS       XM_071832007             546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841809), mRNA.
ACCESSION   XM_071832007
VERSION     XM_071832007.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139841809"
                     /note="uncharacterized LOC139841809; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841809"
     CDS             1..546
                     /gene="LOC139841809"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688108.1"
                     /db_xref="GeneID:139841809"
                     /translation="MVGKRDSWLWMLDSKGIFTVKVCSVLIDNATLTRDPNSIETYRN
                     SLVPKKVEVFIWRARLGYIPVRVTLDKWGINLNSVRCPICDGDIETVEHILFTCQVEK
                     YTWSKVLHWWGYDSTIFSYGDIFSGTFGNLAYDSKRTFWQAVCWVVCYTLWKNRNVKV
                     FKNKIETVSSLVNEIQILSFE"
     misc_feature    <130..294
                     /gene="LOC139841809"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggttggca aaagggatag ttggctttgg atgttggatt cgaaagggat ttttacggtg
       61 aaggtgtgtt cggttttaat tgataacgca acattaacta gggatcctaa ttcgattgaa
      121 acttatcgca atagcttggt tccaaaaaaa gttgaggtct tcatttggcg tgcaagattg
      181 ggctatatcc cggtgagggt gacattggat aaatggggaa tcaatttaaa tagtgttcga
      241 tgcccgattt gtgatggcga tatcgagacg gtggagcaca tcttattcac gtgtcaagtt
      301 gaaaaatata catggtcaaa agtgcttcat tggtggggat atgattcaac aatctttagt
      361 tatggtgata tttttagtgg aactttcggt aatctagcct atgatagtaa aagaacgttt
      421 tggcaagcgg tatgttgggt ggtttgttat actctttgga agaataggaa tgtgaaagtc
      481 ttcaaaaata agattgagac ggtttcatct ttagttaatg agattcaaat cctttccttc
      541 gagtga
//
LOCUS       XR_011757427            1757 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841811), transcript variant X1, ncRNA.
ACCESSION   XR_011757427
VERSION     XR_011757427.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1757
                     /gene="LOC139841811"
                     /note="uncharacterized LOC139841811; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841811"
     ncRNA           1..1757
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841811"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139841811"
ORIGIN      
        1 ccttaattca atcaaacaca tttcacctac acctgctcac cccacccctt ttctctccca
       61 actgccgacc catctaccaa atccgggcat aactttagta acttgccatt tttcaaagac
      121 tcaagcatca atccacactc ctaaaattat ccaagagatg agcagattaa ccctaaagct
      181 agggttgctg ttgaactcgg ggtggaactc ttaatcggta ctgtggcttc aagagttgca
      241 tagggtaatg ttgatgacat tattcaggtt acttcacttt tatccattct catgtttgca
      301 ggactcgagt tttttttttt ttttcctgta agagttggca tatttaaaaa tagccagtag
      361 tttttcacta ataatatgtt tttttgaata aaatgattca tgatgcttta cacatcacgg
      421 aaaacacttt agggtgaaag ctaatgctca aatcattcaa tggcgggtta tgatttagtc
      481 aaggaagatt tttgctgatg aaacataaag gcctacggag cattttgact attttgtttt
      541 taaaatgcga gagctgataa gaaagaatct tgtatgttcg ttagaaattt ggttctaaaa
      601 actaatttcc agtgaagaaa aacgagaaga atggaagttt gcacttgttt agtgtggtca
      661 acaagttgag atttcatata gaccaccagg ttttcctttc aactcaaatc gaaattttat
      721 attgcatttg aagaggtgac ctgtggttca tcggtcttta tgaggatggt tatgatggcg
      781 atcattttgg tggtagctat ggctggcttc atgtcgcctt attacgacgg ttattggtag
      841 gtggagatgg agtttggtaa gattagtatc ttggtttata tggtttgttc agtcttattt
      901 tcttatggat gacatgagat atgtaacatc attagtttga acaagaacat tttatataca
      961 agtggaagca aaaatagagt ttggtttgaa ggctgttgga ttttcgagca gaaacctggt
     1021 aacgttggct tgagtttaat gatttaaatt tagaagtagc atattgttta tctctatctt
     1081 gtgcttgatt ttttttttct catgttgcca tttaaaattg gcatgtgatt gtgaggtgtt
     1141 tatattattc ttggttgttt tttcttttat ttttgtgaca agaacttacc cttagttgat
     1201 tttttagaat ggtcaaagaa cataagatgg ctacatgtgt caatgttatg tgtccatcct
     1261 ttaactcggg tgaaagtata tccacctgcg cattgctacc attctttggt gatttgcatc
     1321 aggtgtaagg tcaatatcta tgagaaatga agttcattca ttacaccccc ggtacaattg
     1381 gctgtgaaat cgttattact ttcgattcaa aactagcttt tggttggaaa agatcatgtc
     1441 tcatggtcag gcccactgtt catgtataat gaaattttgg tttatggatc cattttctta
     1501 ttttgtataa attgatcttg tgacatatta ccactacaac ttctgcaaat tacgacttat
     1561 gggtggtaca ctaaactgga cctgagtgcg ttacttaatg tcaacataat ccagctatat
     1621 agttcattcg agtatttggg aattcgtcaa tggatctgct atagaagaca tgtaaataac
     1681 taaatacata aggattaggt aaccaattta aatgcataag tcatacgtta aagaaatcaa
     1741 agacataatg taaaatt
//
LOCUS       XR_011757428            1568 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841811), transcript variant X2, ncRNA.
ACCESSION   XR_011757428
VERSION     XR_011757428.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1568
                     /gene="LOC139841811"
                     /note="uncharacterized LOC139841811; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841811"
     ncRNA           1..1568
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841811"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139841811"
ORIGIN      
        1 ccttaattca atcaaacaca tttcacctac acctgctcac cccacccctt ttctctccca
       61 actgccgacc catctaccaa atccgggcat aactttagta acttgccatt tttcaaagac
      121 tcaagcatca atccacactc ctaaaattat ccaagagatg agcagattaa ccctaaagct
      181 agggttgctg ttgaactcgg ggtggaactc ttaatcggta ctgtggcttc aagagttgca
      241 tagggtaatg ttgatgacat tattcaggtt acttcacttt tatccattct catgtttgca
      301 ggactcgagt tttttttttt ttttcctgta agagttggca tatttaaaaa tagccagtag
      361 tttttcacta ataatatgtt tttttgaata aaatgattca tgatgcttta cacatcacgg
      421 aaaacacttt agggtgaaag ctaatgctca aatcattcaa tggcgggtta tgatttagtc
      481 aaggaagatt tttgctgatg aaacataaag gcctacggag cattttgact attttgtttt
      541 taaaatgcga gagctgataa gaaagaatct tgtatgttcg ttagaaattt ggttctaaaa
      601 actaatttcc agtgaagaaa aacgagaaga atggaagttt gcacttgttt agtgtggtca
      661 acaagttgag atttcatata gaccaccagg ttttcctttc aactcaaatc gaaattttat
      721 attgcatttg aagaggtgac ctgtggttca tcggtcttta tgaggatggt tatgatggcg
      781 atcattttgg tggtagctat ggctggcttc atgtcgcctt attacgacgg ttattggtag
      841 gtggagatgg agtttggtaa gattagtatc ttggtttata tggtttgttc agtcttattt
      901 tcttatggat gacatgagat atgtaacatc attagtttga acaagaacat tttatataca
      961 agtggaagca aaaatagagt ttggtttgaa ggctgttgga ttttcgagca gaaacctgaa
     1021 tggtcaaaga acataagatg gctacatgtg tcaatgttat gtgtccatcc tttaactcgg
     1081 gtgaaagtat atccacctgc gcattgctac cattctttgg tgatttgcat caggtgtaag
     1141 gtcaatatct atgagaaatg aagttcattc attacacccc cggtacaatt ggctgtgaaa
     1201 tcgttattac tttcgattca aaactagctt ttggttggaa aagatcatgt ctcatggtca
     1261 ggcccactgt tcatgtataa tgaaattttg gtttatggat ccattttctt attttgtata
     1321 aattgatctt gtgacatatt accactacaa cttctgcaaa ttacgactta tgggtggtac
     1381 actaaactgg acctgagtgc gttacttaat gtcaacataa tccagctata tagttcattc
     1441 gagtatttgg gaattcgtca atggatctgc tatagaagac atgtaaataa ctaaatacat
     1501 aaggattagg taaccaattt aaatgcataa gtcatacgtt aaagaaatca aagacataat
     1561 gtaaaatt
//
LOCUS       XR_011757429            1797 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841811), transcript variant X3, ncRNA.
ACCESSION   XR_011757429
VERSION     XR_011757429.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1797
                     /gene="LOC139841811"
                     /note="uncharacterized LOC139841811; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841811"
     ncRNA           1..1797
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841811"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139841811"
ORIGIN      
        1 ccttaattca atcaaacaca tttcacctac acctgctcac cccacccctt ttctctccca
       61 actgccgacc catctaccaa atccgggcat aactttagta acttgccatt tttcaaagac
      121 tcaagcatca atccacactc ctaaaattat ccaagagatg agcagattaa ccctaaagct
      181 agggttgctg ttgaactcgg ggtggaactc ttaatcggta ctgtggcttc aagagttgca
      241 tagggtaatg ttgatgacat tattcaggtt acttcacttt tatccattct catgtttgca
      301 ggactcgagt tttttttttt ttttcctgta agagttggca tatttaaaaa tagccagtag
      361 tttttcacta ataatatgtt tttttgaata aaatgattca tgatgcttta cacatcacgg
      421 aaaacacttt agggtgaaag ctaatgctca aatcattcaa tggcgggtta tgatttagtc
      481 aaggaagatt tttgctgatg aaacataaag taagtattat gttcctgaat gcaaatttaa
      541 ctgggtcagg gcctacggag cattttgact attttgtttt taaaatgcga gagctgataa
      601 gaaagaatct tgtatgttcg ttagaaattt ggttctaaaa actaatttcc agtgaagaaa
      661 aacgagaaga atggaagttt gcacttgttt agtgtggtca acaagttgag atttcatata
      721 gaccaccagg ttttcctttc aactcaaatc gaaattttat attgcatttg aagaggtgac
      781 ctgtggttca tcggtcttta tgaggatggt tatgatggcg atcattttgg tggtagctat
      841 ggctggcttc atgtcgcctt attacgacgg ttattggtag gtggagatgg agtttggtaa
      901 gattagtatc ttggtttata tggtttgttc agtcttattt tcttatggat gacatgagat
      961 atgtaacatc attagtttga acaagaacat tttatataca agtggaagca aaaatagagt
     1021 ttggtttgaa ggctgttgga ttttcgagca gaaacctggt aacgttggct tgagtttaat
     1081 gatttaaatt tagaagtagc atattgttta tctctatctt gtgcttgatt ttttttttct
     1141 catgttgcca tttaaaattg gcatgtgatt gtgaggtgtt tatattattc ttggttgttt
     1201 tttcttttat ttttgtgaca agaacttacc cttagttgat tttttagaat ggtcaaagaa
     1261 cataagatgg ctacatgtgt caatgttatg tgtccatcct ttaactcggg tgaaagtata
     1321 tccacctgcg cattgctacc attctttggt gatttgcatc aggtgtaagg tcaatatcta
     1381 tgagaaatga agttcattca ttacaccccc ggtacaattg gctgtgaaat cgttattact
     1441 ttcgattcaa aactagcttt tggttggaaa agatcatgtc tcatggtcag gcccactgtt
     1501 catgtataat gaaattttgg tttatggatc cattttctta ttttgtataa attgatcttg
     1561 tgacatatta ccactacaac ttctgcaaat tacgacttat gggtggtaca ctaaactgga
     1621 cctgagtgcg ttacttaatg tcaacataat ccagctatat agttcattcg agtatttggg
     1681 aattcgtcaa tggatctgct atagaagaca tgtaaataac taaatacata aggattaggt
     1741 aaccaattta aatgcataag tcatacgtta aagaaatcaa agacataatg taaaatt
//
LOCUS       XR_011757430            1592 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841811), transcript variant X4, ncRNA.
ACCESSION   XR_011757430
VERSION     XR_011757430.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1592
                     /gene="LOC139841811"
                     /note="uncharacterized LOC139841811; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841811"
     ncRNA           1..1592
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841811"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139841811"
ORIGIN      
        1 ccttaattca atcaaacaca tttcacctac acctgctcac cccacccctt ttctctccca
       61 actgccgacc catctaccaa atccgggcat aactttagta acttgccatt tttcaaagac
      121 tcaagcatca atccacactc ctaaaattat ccaagagatg agcagattaa ccctaaagct
      181 agggttgctg ttgaactcgg ggtggaactc ttaatcggta ctgtggcttc aagagttgca
      241 tagggtaatg ttgatgacat tattcagggt gaaagctaat gctcaaatca ttcaatggcg
      301 ggttatgatt tagtcaagga agatttttgc tgatgaaaca taaaggccta cggagcattt
      361 tgactatttt gtttttaaaa tgcgagagct gataagaaag aatcttgtat gttcgttaga
      421 aatttggttc taaaaactaa tttccagtga agaaaaacga gaagaatgga agtttgcact
      481 tgtttagtgt ggtcaacaag ttgagatttc atatagacca ccaggttttc ctttcaactc
      541 aaatcgaaat tttatattgc atttgaagag gtgacctgtg gttcatcggt ctttatgagg
      601 atggttatga tggcgatcat tttggtggta gctatggctg gcttcatgtc gccttattac
      661 gacggttatt ggtaggtgga gatggagttt ggtaagatta gtatcttggt ttatatggtt
      721 tgttcagtct tattttctta tggatgacat gagatatgta acatcattag tttgaacaag
      781 aacattttat atacaagtgg aagcaaaaat agagtttggt ttgaaggctg ttggattttc
      841 gagcagaaac ctggtaacgt tggcttgagt ttaatgattt aaatttagaa gtagcatatt
      901 gtttatctct atcttgtgct tgattttttt tttctcatgt tgccatttaa aattggcatg
      961 tgattgtgag gtgtttatat tattcttggt tgttttttct tttatttttg tgacaagaac
     1021 ttacccttag ttgatttttt agaatggtca aagaacataa gatggctaca tgtgtcaatg
     1081 ttatgtgtcc atcctttaac tcgggtgaaa gtatatccac ctgcgcattg ctaccattct
     1141 ttggtgattt gcatcaggtg taaggtcaat atctatgaga aatgaagttc attcattaca
     1201 cccccggtac aattggctgt gaaatcgtta ttactttcga ttcaaaacta gcttttggtt
     1261 ggaaaagatc atgtctcatg gtcaggccca ctgttcatgt ataatgaaat tttggtttat
     1321 ggatccattt tcttattttg tataaattga tcttgtgaca tattaccact acaacttctg
     1381 caaattacga cttatgggtg gtacactaaa ctggacctga gtgcgttact taatgtcaac
     1441 ataatccagc tatatagttc attcgagtat ttgggaattc gtcaatggat ctgctataga
     1501 agacatgtaa ataactaaat acataaggat taggtaacca atttaaatgc ataagtcata
     1561 cgttaaagaa atcaaagaca taatgtaaaa tt
//
LOCUS       XR_011757431            1569 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139841811), transcript variant X5, ncRNA.
ACCESSION   XR_011757431
VERSION     XR_011757431.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1569
                     /gene="LOC139841811"
                     /note="uncharacterized LOC139841811; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841811"
     ncRNA           1..1569
                     /ncRNA_class="lncRNA"
                     /gene="LOC139841811"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139841811"
ORIGIN      
        1 ccttaattca atcaaacaca tttcacctac acctgctcac cccacccctt ttctctccca
       61 actgccgacc catctaccaa atccgggcat aactttagta acttgccatt tttcaaagac
      121 tcaagcatca atccacactc ctaaaattat ccaagagatg agcagattaa ccctaaagct
      181 agggttgctg ttgaactcgg ggtggaactc ttaatcggta ctgtggcttc aagagttgca
      241 taggggtgaa agctaatgct caaatcattc aatggcgggt tatgatttag tcaaggaaga
      301 tttttgctga tgaaacataa aggcctacgg agcattttga ctattttgtt tttaaaatgc
      361 gagagctgat aagaaagaat cttgtatgtt cgttagaaat ttggttctaa aaactaattt
      421 ccagtgaaga aaaacgagaa gaatggaagt ttgcacttgt ttagtgtggt caacaagttg
      481 agatttcata tagaccacca ggttttcctt tcaactcaaa tcgaaatttt atattgcatt
      541 tgaagaggtg acctgtggtt catcggtctt tatgaggatg gttatgatgg cgatcatttt
      601 ggtggtagct atggctggct tcatgtcgcc ttattacgac ggttattggt aggtggagat
      661 ggagtttggt aagattagta tcttggttta tatggtttgt tcagtcttat tttcttatgg
      721 atgacatgag atatgtaaca tcattagttt gaacaagaac attttatata caagtggaag
      781 caaaaataga gtttggtttg aaggctgttg gattttcgag cagaaacctg gtaacgttgg
      841 cttgagttta atgatttaaa tttagaagta gcatattgtt tatctctatc ttgtgcttga
      901 tttttttttt ctcatgttgc catttaaaat tggcatgtga ttgtgaggtg tttatattat
      961 tcttggttgt tttttctttt atttttgtga caagaactta cccttagttg attttttaga
     1021 atggtcaaag aacataagat ggctacatgt gtcaatgtta tgtgtccatc ctttaactcg
     1081 ggtgaaagta tatccacctg cgcattgcta ccattctttg gtgatttgca tcaggtgtaa
     1141 ggtcaatatc tatgagaaat gaagttcatt cattacaccc ccggtacaat tggctgtgaa
     1201 atcgttatta ctttcgattc aaaactagct tttggttgga aaagatcatg tctcatggtc
     1261 aggcccactg ttcatgtata atgaaatttt ggtttatgga tccattttct tattttgtat
     1321 aaattgatct tgtgacatat taccactaca acttctgcaa attacgactt atgggtggta
     1381 cactaaactg gacctgagtg cgttacttaa tgtcaacata atccagctat atagttcatt
     1441 cgagtatttg ggaattcgtc aatggatctg ctatagaaga catgtaaata actaaataca
     1501 taaggattag gtaaccaatt taaatgcata agtcatacgt taaagaaatc aaagacataa
     1561 tgtaaaatt
//
LOCUS       XM_071832009             342 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841812), mRNA.
ACCESSION   XM_071832009
VERSION     XM_071832009.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..342
                     /gene="LOC139841812"
                     /note="uncharacterized LOC139841812; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139841812"
     CDS             1..342
                     /gene="LOC139841812"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688110.1"
                     /db_xref="GeneID:139841812"
                     /translation="MAISLTRVLFFIILFCSFALTLNNKIVSAQCVGDMQGLMERCAR
                     YVQKSGPTIQPSSGCCSIVKNVDLACVCGHITPDVESVISMEKSAFIARACGKPLARG
                     THCGSYIVPGN"
     misc_feature    106..300
                     /gene="LOC139841812"
                     /note="Non-specific lipid-transfer protein (nsLTP)-like
                     subfamily; composed of predominantly uncharacterized
                     proteins with similarity to nsLTPs, including Medicago
                     truncatula MtN5, the root-specific Phaseolus vulgaris
                     PVR3, Antirrhinum majus FIL1, and Lilium...; Region:
                     nsLTP_like; cd04660"
                     /db_xref="CDD:240018"
ORIGIN      
        1 atggcaatct ctttgactcg tgttttgttt ttcattatcc ttttttgttc tttcgctcta
       61 accctgaaca ataagatcgt ctcagcccaa tgtgtagggg atatgcaagg actaatggag
      121 cgatgtgcaa ggtatgttca aaaatcgggt ccaactattc aaccgtcaag tggttgttgt
      181 tcgatcgtta aaaatgttga tttggcatgt gtttgtggtc atatcacacc ggatgtggag
      241 agtgttatta gcatggagaa gtctgccttc attgctcgag cgtgtggtaa accgcttgcc
      301 cgtggaacac attgtggaag ttatattgta cctggaaact ag
//
LOCUS       XM_071832010             552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dirigent protein 22-like
            (LOC139841813), mRNA.
ACCESSION   XM_071832010
VERSION     XM_071832010.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..552
                     /gene="LOC139841813"
                     /note="dirigent protein 22-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841813"
     CDS             1..552
                     /gene="LOC139841813"
                     /codon_start=1
                     /product="dirigent protein 22-like"
                     /protein_id="XP_071688111.1"
                     /db_xref="GeneID:139841813"
                     /translation="MTSFQNYIIFSIYIALILSTTVAPNITFSEHFAKLRPTTSKKMT
                     RLHFYFHDIVSGKNPTAKIIIRPKNSFGMTAMIDDPLTVDTKPGSTVVGRAQGLYALA
                     SQHEPALLMAMNFVFTYGKYNGSALSIMGRNLVVDAVREMPVIGGMGLFRYARGYALA
                     STVRYNPKTGDAVVQYNVTVMHG"
     misc_feature    130..543
                     /gene="LOC139841813"
                     /note="Dirigent-like protein; Region: Dirigent; pfam03018"
                     /db_xref="CDD:460780"
ORIGIN      
        1 atgacttctt tccaaaatta cataattttt tccatttaca ttgccctcat tttatccacc
       61 acagttgctc ctaacatcac tttctccgag catttcgcca aattgagacc aacaacatcc
      121 aaaaaaatga cgcgccttca tttctatttt cacgatatcg ttagtggcaa aaatccaacc
      181 gctaagataa taatcagacc taaaaattca tttggaatga ctgcaatgat cgatgaccct
      241 ttgaccgtag acaccaagcc tggttcaaca gtggtgggcc gggctcaggg actttacgct
      301 ttggcctctc aacatgaacc agccttacta atggctatga attttgtatt tacttatggt
      361 aagtacaatg gaagtgcact tagtattatg ggacgaaacc ttgtggttga tgcagtacga
      421 gaaatgccgg ttataggggg aatggggttg tttaggtatg cacgtggcta tgcactcgcg
      481 agtacggtta ggtataatcc aaaaacaggt gatgctgtag ttcagtataa tgtaactgta
      541 atgcatggct ga
//
LOCUS       XM_071832011            1392 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841814), mRNA.
ACCESSION   XM_071832011
VERSION     XM_071832011.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1392
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1392
                     /gene="LOC139841814"
                     /note="uncharacterized LOC139841814; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841814"
     CDS             1..1392
                     /gene="LOC139841814"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688112.1"
                     /db_xref="GeneID:139841814"
                     /translation="MARKGINLDETHKCRACGSRPSERRRSSKSSHSNPSNRFCPINS
                     SELKEFGHDLGLRWNPLNPHCLCSDFFLAIRGKWVISGQESIIADIATRFNELIARNN
                     LIEIPINGRKFTRISDDGEKFSKLDRFLVNGNFISLWKDLSVQPLDRQVSDHCPLILK
                     DKYIDFGPKPFKIFNEWFTKYGVEDIVKNAWVKPVTSKRLDCIFRDRLKNVMFDLHDW
                     SKREFGNLDTEINDLKSKVEVWEKIAECGSLNDNERKTWLDDRKSWIEKENIKINMLK
                     QKAKNRWILEGDENSKFFHASIQKIYNKSNIRGLNKNGSWNENPSEVKDAIRNHFQKI
                     FESKVCERPQPVIPRPNCNTNCNTNSPPTNFGLGNASGSTVFTRLANSPVYVGPDFPD
                     LLRLTISEASDLELSFCEKEIWEAIKNCGGTKAPGPDGFNLSFYKKYWDTIKGDLVNA
                     IQCFWENGEISKG"
ORIGIN      
        1 atggctagaa aaggaatcaa ccttgatgaa acccataaat gtagagcttg tggttcaagg
       61 cctagtgaaa ggaggcgttc ttcaaagtct agtcattcaa acccaagtaa tcgtttctgt
      121 ccgatcaata gcagtgaatt aaaggaattt ggtcatgatc tcgggttgag gtggaatccc
      181 ctcaaccccc attgtctttg tagcgatttc tttttagcta ttcgggggaa gtgggttata
      241 tcggggcaag agtcgattat tgctgacata gctactaggt tcaatgagct tattgcgagg
      301 aataacttaa tcgagattcc aattaacggt aggaaattta caagaattag tgacgatgga
      361 gaaaagttta gtaagcttga tagatttttg gttaacggca attttattag tttatggaaa
      421 gatctctcgg ttcaaccttt ggataggcaa gtctccgacc attgtccctt gatccttaaa
      481 gataaataca ttgattttgg tccaaaaccc ttcaagattt ttaatgaatg gttcactaaa
      541 tatggggttg aagatattgt gaaaaatgct tgggtcaaac cggttactag taagagatta
      601 gattgcatct ttagggatag acttaagaat gttatgtttg atcttcatga ttggagtaaa
      661 agagaatttg gtaatctaga tactgagata aacgatctta agtcgaaggt tgaggtgtgg
      721 gagaaaatag ccgaatgcgg gtctctaaat gataatgaaa gaaaaacatg gttggatgat
      781 cgtaagagtt ggattgaaaa agaaaatata aaaatcaata tgttgaaaca aaaggcaaaa
      841 aatcgatgga tcttagaagg cgacgagaac tcgaaattct ttcacgcttc cattcaaaaa
      901 atatataata agagcaatat ccgaggtctt aacaaaaatg gaagttggaa cgaaaatccg
      961 agtgaagtta aagacgctat tagaaatcat ttccaaaaaa tctttgagtc aaaagtttgt
     1021 gaaaggcccc aacctgtaat tcctcggccc aattgcaata ccaactgcaa caccaacagt
     1081 ccacccacta attttgggct gggcaatgct tctgggtcga cagtttttac gcgtcttgcc
     1141 aacagtccag tttatgttgg gcctgacttt cctgacttat tacggctcac tatttcagaa
     1201 gcaagcgatc ttgaattatc gttttgtgaa aaagaaattt gggaagcgat taaaaattgt
     1261 gggggtacaa aagcaccggg tcccgatggt ttcaacttaa gcttctataa aaagtattgg
     1321 gacacaatta aaggagattt ggttaatgct attcaatgtt tttgggaaaa tggtgagata
     1381 tcaaaggggt ga
//
LOCUS       XM_071832012             375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glucan
            endo-1,3-beta-glucosidase-like (LOC139841815), mRNA.
ACCESSION   XM_071832012
VERSION     XM_071832012.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..375
                     /gene="LOC139841815"
                     /note="glucan endo-1,3-beta-glucosidase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139841815"
     CDS             1..375
                     /gene="LOC139841815"
                     /codon_start=1
                     /product="glucan endo-1,3-beta-glucosidase-like"
                     /protein_id="XP_071688113.1"
                     /db_xref="GeneID:139841815"
                     /translation="MATISPLTFRTVLILYFVIFSGGILKPAKVQAEEGQGFWCVAKP
                     SASEMELKQDIVFACKFVECNIINPGGACFEPQTLINHASVVMNLYYQANGRHPWDCD
                     FTKSAIVAINDPSYGDCKYPYN"
     misc_feature    115..363
                     /gene="LOC139841815"
                     /note="Possibly involved in carbohydrate binding; Region:
                     X8; smart00768"
                     /db_xref="CDD:197867"
ORIGIN      
        1 atggccacca tatctccact caccttccgt acagttctca tcttatactt tgttattttc
       61 tcaggtggaa tactaaaacc tgctaaagta caggcagaag aagggcaggg attttggtgt
      121 gtagcgaagc catcggcttc agaaatggaa ttaaaacagg acattgtgtt cgcttgcaag
      181 ttcgtggagt gtaatattat taatccagga ggagcgtgtt ttgaaccaca aacactcatc
      241 aatcacgctt cggtagttat gaatttgtac taccaagcaa acggaagaca tccttgggat
      301 tgtgacttca cgaaatccgc aatcgttgct attaatgacc caagctacgg tgattgcaag
      361 tatccctata actag
//
LOCUS       XM_071832013            1398 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides caffeoylshikimate
            esterase-like (LOC139841816), mRNA.
ACCESSION   XM_071832013
VERSION     XM_071832013.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1398
                     /gene="LOC139841816"
                     /note="caffeoylshikimate esterase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139841816"
     CDS             55..1047
                     /gene="LOC139841816"
                     /codon_start=1
                     /product="caffeoylshikimate esterase-like"
                     /protein_id="XP_071688114.1"
                     /db_xref="GeneID:139841816"
                     /translation="MATLNHPPLPPPPTYYWGETPESEFYKSQNVRNTKSYFTTPYNE
                     TKIFTQSWLPLNQPIKAIVCMTHGYRNDTSWCFQKIAIAYANWGYAVFAADLIGHGRS
                     DGLRAYIGDMDKAAAIQLSFFLSVRNSEVYCKLPAFLFGESMGGMITMLVYLQSEPDT
                     WTGLIFSAALFVTPKLLTPSKLHITLYGLLFGLADTWASMPDNNVPVNAIRDPEKLKI
                     IAVNPQRYKGRHRIGTMREVARVTNYLQNNFHKVTTPFLAVHGTADGVTCPTGSQMLY
                     DKASSEDKTLKLYEGMYHSLIQGEPDEASNLVLADMRAWIDERTEKYGSKSNGN"
     misc_feature    97..1011
                     /gene="LOC139841816"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 gaagacaata aactaaagtt caaccaacta caaccaccac catcataaac catcatggca
       61 acactaaacc accctccatt accaccaccg ccaacttatt attggggcga aacacccgaa
      121 tccgaattct acaaatcaca aaacgtacgt aacacaaagt catatttcac tacaccttat
      181 aatgaaacaa aaatattcac acaatcatgg ttaccattaa accaaccaat taaagccata
      241 gtttgcatga cacatggata tagaaatgac actagttggt gttttcaaaa gatcgcgatc
      301 gcatatgcga attggggtta cgcggttttt gcggctgatt taatcggtca tggtcgttca
      361 gatggactac gagcgtacat tggtgatatg gataaagctg ctgcaataca attatcattc
      421 tttttgagtg ttagaaatag tgaagtgtat tgtaagttac ctgctttttt gtttggggag
      481 tctatgggtg gtatgatcac catgttggtt tatttgcaat ctgaaccgga tacttggacc
      541 ggcttgatct tctccgccgc cttatttgtt acacccaaat tgttgacccc gtctaagctg
      601 catatcaccc tctacggatt gttattcggg ctagctgata catgggcatc aatgcccgat
      661 aacaatgtcc cagtgaacgc aattagagat cccgaaaaac taaagataat agcagtgaat
      721 ccacaacggt ataaaggaag acatcgaata ggtacaatga gagaggtggc aagagtaaca
      781 aattacttac aaaacaactt ccacaaggtt acaactccct ttttagctgt tcatggaacc
      841 gcggatgggg tcacgtgccc cactgggtcc caaatgttgt atgataaagc atcgagtgaa
      901 gataagactt tgaagttgta cgagggtatg taccattcgt tgatacaagg tgaacccgat
      961 gaggcttcca atcttgtgtt ggctgatatg agagcgtgga ttgatgagag gaccgaaaaa
     1021 tatgggtcta aaagtaacgg taactaatca aatgataaaa gatttataat ctacatatat
     1081 taacatcaac tgtaatacct aattttacgg gttgtggcat gttgtgaaaa gtgttttgac
     1141 aaatggggta tgttaatctt cttgtttcgc gttattatga tgttaaaaag tacattttat
     1201 atgaaaagta tttgaaagta ggctattgta attgcatttt cgggtcattc gatctattaa
     1261 acagttatga aataatgatt agtgtatgta ttgctagata atttgtatgt actgaagcaa
     1321 ctttcttagg ttagggaagg ggtgcccatc cgagtacttg cacttgataa ttcattttct
     1381 tcgtaactaa tacggagt
//
LOCUS       XM_071832015            1074 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841818), mRNA.
ACCESSION   XM_071832015
VERSION     XM_071832015.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1074
                     /gene="LOC139841818"
                     /note="uncharacterized LOC139841818; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841818"
     CDS             1..1074
                     /gene="LOC139841818"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688116.1"
                     /db_xref="GeneID:139841818"
                     /translation="MPEPEDVDEYISAELPDEDEDEDPELFQMVSELMIQGPCGENNP
                     KCPCTDVKKSALSDFSKPYADVKSVEKDGYPVYKRTENGRKINKQGHNIDNGYVVPYN
                     PWLVKKYQAHINVEWCNQVGAIKYVSSCEAVWRILSFDIHHRNPTVIRLSFHLHNQHS
                     IVFDQYDLIENVLDKLLVKTSQFLELMKCNQISEEARKLTYVEFPTKSVRGPTSYQDI
                     RTVNGNIYPTLKDACYALGLLDDDQEYIDGIKEANAWGSEIQLPRETLENLTFNEIEK
                     ILHHNGKSLKNFRPMPYPSTSCLNLLENSLIVDELSNNMKFFLWKTLSAALSSKGEIV
                     LNVASSGIAALLLSGGRTPIHVL"
     misc_feature    946..>1059
                     /gene="LOC139841818"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atgcctgaac cagaagatgt tgatgagtat atttctgctg aattaccgga cgaggacgaa
       61 gacgaagacc cggaactatt tcaaatggtg tcagagttaa tgattcaagg accctgtggt
      121 gaaaataatc caaaatgccc atgcacagac gtcaaaaaaa gtgcactaag cgatttttcg
      181 aagccttatg cagacgttaa aagtgtagaa aaagatggat atccggtata caaaagaaca
      241 gaaaatggca gaaaaataaa caaacaagga cataatattg ataacggata cgttgttcct
      301 tataatccgt ggttggtgaa gaaatatcaa gctcatatca atgtcgaatg gtgtaaccaa
      361 gtaggagcaa ttaaatacgt ctcatcatgt gaggccgttt ggagaatact ctcttttgat
      421 atacatcata ggaaccctac tgttatacgg ctatcttttc acttacataa tcaacattct
      481 attgtgtttg atcaatacga tttaattgaa aatgttttag acaaactttt ggttaaaacc
      541 tctcagtttc ttgaattgat gaagtgtaat caaataagcg aagaagcaag aaagttaact
      601 tatgttgagt ttcctacaaa gtctgtaaga ggtcccactt catatcaaga tattaggaca
      661 gttaatggta acatctatcc tacattaaaa gatgcgtgtt atgctttggg tttattagat
      721 gatgatcaag aatacataga tggtataaaa gaggcaaatg cttggggatc tgaaattcaa
      781 ctgccaagag agacgttaga gaaccttaca tttaatgaga ttgaaaagat acttcatcat
      841 aatggcaaat ctttaaagaa tttccgtcca atgccttacc cttctacatc gtgtttaaat
      901 ttattagaaa actcacttat tgtagacgaa ctttccaata atatgaaatt ttttttgtgg
      961 aaaaccttat cggctgcatt gagtagtaaa ggtgagatcg ttttgaatgt tgcatcaagt
     1021 ggaattgcag cattgttgtt atcaggagga aggacgccca ttcacgtttt gtaa
//
LOCUS       XM_071832016             540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841820), mRNA.
ACCESSION   XM_071832016
VERSION     XM_071832016.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..540
                     /gene="LOC139841820"
                     /note="uncharacterized LOC139841820; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841820"
     CDS             1..540
                     /gene="LOC139841820"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688117.1"
                     /db_xref="GeneID:139841820"
                     /translation="MPNYGNFLKDLIARKGEHEHASTTFLKAECDAIMKKREMPPKLD
                     MTRSLSDSGACINLMPYTLHSLLNLGELKPATIGIRLIDRSVFRLVGSVENLVFKVGE
                     LVFLADFVVFDLEEYKVIPHALVIPFLATASAMIDVKAGKLTFKECGKHMSFQTRHTT
                     NLPPTPIGSLNVVASVETT"
     misc_feature    136..390
                     /gene="LOC139841820"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(151..153,157..159,163..165,235..243,358..360)
                     /gene="LOC139841820"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    151..159
                     /gene="LOC139841820"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    151..153
                     /gene="LOC139841820"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(235..246,256..267)
                     /gene="LOC139841820"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcccaatt atgggaattt tttgaaggat ctcatagcaa ggaagggcga gcacgagcat
       61 gcatctacca cgttccttaa agcggaatgt gatgcaatta tgaagaagag agagatgcca
      121 cccaagttgg atatgacgag gtctttatct gactcaggtg cgtgtattaa tttgatgccc
      181 tatactttac actcactgtt gaatttaggt gaacttaagc cagccactat tggtattaga
      241 ttgattgata ggtctgtttt tcgactggta ggaagtgttg aaaatttagt ttttaaggta
      301 ggagagttgg tatttctagc agattttgtg gtttttgatt tagaagagta taaggtgata
      361 ccacatgctt tagttatacc attccttgca actgcaagtg ctatgattga tgttaaggct
      421 ggaaaattga cttttaagga atgtggtaag catatgagct ttcaaactag gcataccaca
      481 aacctcccac ccacacccat aggttctttg aatgttgttg ctagtgttga aaccacttaa
//
LOCUS       XM_071832017             594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pathogenesis-related protein
            1A-like (LOC139841821), mRNA.
ACCESSION   XM_071832017
VERSION     XM_071832017.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..594
                     /gene="LOC139841821"
                     /note="pathogenesis-related protein 1A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139841821"
     CDS             1..594
                     /gene="LOC139841821"
                     /codon_start=1
                     /product="pathogenesis-related protein 1A-like"
                     /protein_id="XP_071688118.1"
                     /db_xref="GeneID:139841821"
                     /translation="MESLKLISFSLLITTISFLSLSINAQNIQQDYLNAHNSARRQVG
                     VADIVWNATVAGYAQNYANQRIGDCNLVHSGVDSGLDSSCAIGIVADGKVGVVGLVSP
                     KCITNFNSPYGENLAGSSGMITRTAAVNLWVAEKSYYDHTTNTCASGRVCGHYTQVVW
                     RSSTQLGCARVQCANNRGSFVICNYYPRGNYIGQSPY"
     misc_feature    85..591
                     /gene="LOC139841821"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain of
                     pathogenesis-related protein 1 (PR-1) family proteins;
                     Region: CAP_PR-1; cd05381"
                     /db_xref="CDD:349400"
ORIGIN      
        1 atggagtctt taaagctgat ttccttttca ctactaatta ctaccattag tttcttatct
       61 ctgtccatta atgctcaaaa tatccaacaa gattacttaa atgctcataa ttcagcacgt
      121 cgtcaagtgg gcgtagcaga cattgtatgg aatgccactg tggcaggata cgctcaaaac
      181 tatgctaacc aaaggatagg agactgcaac cttgtccatt ctggtgttga ctccggactt
      241 gactcgtctt gtgccatagg tattgttgct gatggaaaag ttggcgtagt agggctcgtt
      301 tctccaaaat gcattactaa ttttaacagc ccttatggtg agaaccttgc tgggagtagt
      361 ggtatgatca cacgtactgc agccgttaat ttatgggtag ctgagaagtc atattatgat
      421 catactacta atacttgtgc cagcggacgc gtttgtggtc actatacaca agtcgtgtgg
      481 cgtagttcca cgcaacttgg ttgtgctagg gttcagtgtg ccaataaccg tgggtctttc
      541 gttatttgta actattatcc tcgtggaaac tatattggac agtctcctta ctag
//
LOCUS       XM_071832018             516 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841822), mRNA.
ACCESSION   XM_071832018
VERSION     XM_071832018.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..516
                     /gene="LOC139841822"
                     /note="uncharacterized LOC139841822; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841822"
     CDS             1..516
                     /gene="LOC139841822"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688119.1"
                     /db_xref="GeneID:139841822"
                     /translation="MGDPEPFLISCNVTGSEMLTSLADSGASINFMPYSIYKRLGLGD
                     LSPTTMGVKLIDQSINSSMGIVEDLIVNVGDMEFPINFVIVDIKEDSIVPLVLGRPFL
                     ATAGSFFDFRTGKLTLQDKGKYKSIKTKRVKTPSMPLTTQQVVASVQCITSTRQVGSP
                     TKGSGGLTKGI"
     misc_feature    25..309
                     /gene="LOC139841822"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(70..72,76..78,82..84,154..162,286..288)
                     /gene="LOC139841822"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    70..78
                     /gene="LOC139841822"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    70..72
                     /gene="LOC139841822"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(154..165,175..186)
                     /gene="LOC139841822"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgggtgatc ccgaaccttt ccttatctca tgcaatgtaa ccggttcaga gatgctcaca
       61 tctttagccg attcaggggc aagtatcaat ttcatgccct actccattta caaaaggcta
      121 ggcctaggtg acctttcacc tactacaatg ggagttaaat taattgatca atcaattaac
      181 tctagtatgg ggatcgtcga agacttaatt gttaatgtgg gggacatgga atttcccatt
      241 aactttgtta ttgttgatat aaaggaagac tcgattgtgc cccttgtttt gggaaggcca
      301 ttcttggcaa ctgcgggctc tttctttgac tttagaaccg ggaaattgac tcttcaggat
      361 aaagggaaat acaagagcat aaaaaccaaa cgtgttaaaa caccatcaat gccattgacc
      421 acacaacaag ttgttgctag tgtgcaatgc atcacaagca caaggcaagt tggttcacca
      481 actaaaggta gtgggggatt aaccaaggga atttaa
//
LOCUS       XM_071832019             711 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00310-like (LOC139841823), mRNA.
ACCESSION   XM_071832019
VERSION     XM_071832019.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..711
                     /gene="LOC139841823"
                     /note="uncharacterized mitochondrial protein
                     AtMg00310-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841823"
     CDS             1..711
                     /gene="LOC139841823"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00310-like"
                     /protein_id="XP_071688120.1"
                     /db_xref="GeneID:139841823"
                     /translation="MNRVASWNPLQDRFTKRLSGWKANLLSIGGHLTLIKAVLGSLGI
                     YFLSIYKCPETVLNNLESVRASFFWGSLENNKKMHWVRWDQVLASTDHGGLGVGSLRA
                     FNQALLLKWIWCFVNKPDSKWAEVIRAIYGEKAGLDGVPIRGTSVWSTIVKLFFKLKS
                     DGVIPDNVLRVKIGNARNTRFWLDNWKGDGSFMVKYNRLDHLETNKNCFIADRFVNGS
                     WRWEWVREQIGSRNVNAL"
ORIGIN      
        1 atgaaccgcg tcgctagttg gaatcctctt caagatcgtt ttaccaaaag gttatccggt
       61 tggaaggcta acttactttc tattggtggt catcttacgc ttatcaaagc cgtgttgggc
      121 agcttgggta tatatttttt gtctatctat aaatgcccag aaaccgtact gaataatctt
      181 gaaagtgttc gcgcgagttt tttctggggc agtttggaga ataacaaaaa gatgcattgg
      241 gttcgttggg accaagtgct agcttcgact gatcatggtg gtctaggagt tgggagttta
      301 cgggcgttta atcaagcact attactcaag tggatatggt gtttcgttaa taaaccggat
      361 tcaaaatggg ccgaggtgat tcgagctata tatggtgaaa aggctgggtt agatggtgtc
      421 ccgattcgtg gaacgagtgt atggagtacg atcgtgaagt tgttcttcaa gctaaagtct
      481 gatggtgtga ttccggacaa tgtgctccgg gtcaagatag gtaatgctcg taatactcgg
      541 ttttggttag ataattggaa aggtgatgga tctttcatgg ttaaatataa tagattagat
      601 catctcgaaa caaataaaaa ttgttttatt gcggatcggt ttgtaaatgg ctcttggcgt
      661 tgggaatggg tccgtgagca aattgggtca aggaatgtaa atgctcttta a
//
LOCUS       XM_071832020            1191 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841825), mRNA.
ACCESSION   XM_071832020
VERSION     XM_071832020.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1191
                     /gene="LOC139841825"
                     /note="uncharacterized LOC139841825; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841825"
     CDS             1..1191
                     /gene="LOC139841825"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688121.1"
                     /db_xref="GeneID:139841825"
                     /translation="MPVYFVSKVVQHGKVTYKPIEKLIFALVHTARRLIRYFQAHPML
                     VVTDSPIKQVLSKPEVYGRAARWAIELGEHEISYPPLRTTVKGQIMADFMVEFICTAP
                     PEPAVEEVSNTVTWELFTDRASSADGAGAGLTLISPDGEEHTYTLHFEFPASNNEAEY
                     EALLSSLRMAEKMGIKALKVSVDSQLVSNQMNGTFEARDLAMQKYLKLAEEMANKLEL
                     FSITQVPRSMNKKADVLSKLATSVFSHFAKDVWVEVLCQKSTNVVQANGQVEVTNRDI
                     VAEIRARLDTDRKGWADELPQVLWAFRTTPQGSNREMPFSLVYGSEAVIPAEIAVPTQ
                     RVMEFNDESNVINLKENLDLLEERHDIAAIREAFNKQKIAKYYVWRNNNANRVEDTGK
                     LGPN"
     misc_feature    <4..219
                     /gene="LOC139841825"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    346..717
                     /gene="LOC139841825"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(361..372,460..468,475..477,547..549,667..669,
                     709..711)
                     /gene="LOC139841825"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgccggttt attttgttag caaagtggta caacatggca aagttactta caaaccgatt
       61 gagaaactta tttttgcatt agtccatacc gcgagacggt tgatacggta cttccaagcg
      121 cacccgatgc tggtggtaac tgattcacct atcaaacagg tgctaagcaa accggaggtt
      181 tatggtaggg cagccaggtg ggcaatcgaa ctaggtgaac atgaaatcag ttaccccccc
      241 ctccgtacca cagttaaagg ccagattatg gcagatttta tggttgaatt catatgcacc
      301 gcaccaccgg agccggctgt tgaagaagtg tcaaataccg tcacgtggga actatttact
      361 gatagagcgt caagtgctga cggtgcaggt gcaggcctaa ctttgattag tccagatggc
      421 gaggaacaca cctacacatt gcatttcgag ttccccgcct ccaacaatga agccgaatac
      481 gaggcgttgc tgtctagttt acgaatggct gaaaagatgg ggataaaagc cctgaaggta
      541 tcggttgatt ctcagctcgt gtcaaatcag atgaacggga cgtttgaggc tagagatctg
      601 gccatgcaaa aatatctgaa gttagcagaa gagatggcca ataaattaga acttttctca
      661 atcacgcaag taccgcggtc catgaacaaa aaggccgacg tactcagtaa acttgcaacg
      721 agcgtgttta gtcactttgc taaggacgtt tgggtggagg tcctatgtca aaaatccact
      781 aacgtggtac aggcaaacgg gcaagttgaa gttaccaaca gagacattgt tgctgagatt
      841 agggcaaggc tggacacgga tagaaagggt tgggcagatg agcttccaca agtcttatgg
      901 gcgttccgaa ccacacccca aggaagcaac agagaaatgc ctttcagcct cgtttatggg
      961 tccgaagcgg taataccggc tgaaatcgcc gttccaaccc aacgcgtaat ggaattcaat
     1021 gatgagtcca acgttattaa cttgaaagaa aatttggact tgttggagga aaggcatgac
     1081 atcgccgcca tcagagaagc atttaacaaa cagaaaattg ccaagtatta tgtgtggcgt
     1141 aacaacaatg ccaaccgggt tgaagatact ggcaaattgg ggccgaatta g
//
LOCUS       XM_071832021             384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841826), mRNA.
ACCESSION   XM_071832021
VERSION     XM_071832021.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..384
                     /gene="LOC139841826"
                     /note="uncharacterized LOC139841826; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841826"
     CDS             1..384
                     /gene="LOC139841826"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688122.1"
                     /db_xref="GeneID:139841826"
                     /translation="MERASANHSRLNMSPNATTPVHHLSLRSVLEKEKLNDTNFLDWY
                     RNLRIVLKVKKKSYILDGPVLEEPPANATKSIRDAWTKHTDDSTEVACLMLATMIPDL
                     QKDLEHIDAFEILKQLKEMFQQQAR"
ORIGIN      
        1 atggagagag catcagccaa ccactcaagg ttaaatatgt cacccaatgc aactacaccc
       61 gttcaccacc tttctctaag atctgtctta gagaaggaaa aactcaatga tacgaacttc
      121 ttagactggt atcgtaattt gagaattgtt ctcaaagtca aaaagaaatc gtatatactt
      181 gatgggcccg ttctcgagga accccctgct aatgccacta agagcatccg agatgcttgg
      241 actaagcaca cggatgactc cacagaggta gcatgcctca tgttagccac catgattcca
      301 gacttgcaaa aggacctgga acatattgat gcctttgaga tacttaagca gctaaaggaa
      361 atgttccaac aacaagctag gtaa
//
LOCUS       XM_071832022             705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841828), mRNA.
ACCESSION   XM_071832022
VERSION     XM_071832022.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..705
                     /gene="LOC139841828"
                     /note="uncharacterized LOC139841828; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841828"
     CDS             1..705
                     /gene="LOC139841828"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688123.1"
                     /db_xref="GeneID:139841828"
                     /translation="MYNDATERVRVCQEYQQHAPVSKAPWHSMTPITSPCPFCKWAIN
                     IVGPFPSGVGNADFLVVTIDFFTKWVKAKPVNKITSKKNAIFRLGKHRLPIRHSKRDN
                     ELPKVLWEHWTTSKHSTSETPFILVYGSEAVLPAEIAILAERILWFSQDQNSEDLRTN
                     LDLLEKRRKMAATHEAIIKQRIARYYDKRVRLITYAVGDLVWRDNQASRFKDTDNLGP
                     NWERLFKVIRISKTGT"
ORIGIN      
        1 atgtacaatg atgcgactga aagagtgcga gtatgccaag aataccaaca acatgcacca
       61 gttagcaaag cgccatggca ctcgatgacc cccatcacat caccatgccc gttctgcaaa
      121 tgggctatta atatagtggg acctttccct agtggagttg ggaatgctga ttttttagta
      181 gtcaccatcg acttcttcac aaaatgggta aaggccaagc ccgttaataa aatcactagt
      241 aagaaaaatg ctatatttcg tttgggaaaa catcgtttgc cgattcggca ttctaaacga
      301 gataatgaac tccccaaggt tctttgggaa cactggacaa cctccaaaca tagtaccagt
      361 gagacgccat tcattttggt atatggatca gaggctgtct tgccagcaga aatagccatc
      421 ctagcagaac gaattttgtg gtttagtcag gatcagaact ctgaagattt gcgcactaac
      481 ctcgacttac tagaaaagcg taggaagatg gccgccacac acgaagccat tatcaaacaa
      541 cgaatcgcaa gatattacga caagcgagta agactcatta catacgccgt gggcgatctt
      601 gtttggcgcg ataaccaagc aagtaggttc aaagacaccg acaatctggg acccaactgg
      661 gaacgcctct tcaaagttat tagaatcagt aaaactggaa cctag
//
LOCUS       XM_071832024            1065 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYB41-like (LOC139841829), mRNA.
ACCESSION   XM_071832024
VERSION     XM_071832024.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1065
                     /gene="LOC139841829"
                     /note="transcription factor MYB41-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139841829"
     CDS             64..1065
                     /gene="LOC139841829"
                     /codon_start=1
                     /product="transcription factor MYB41-like"
                     /protein_id="XP_071688125.1"
                     /db_xref="GeneID:139841829"
                     /translation="MMGRSSSSDENGLKKGPWTPEEDQMLIDYIERNGHGSWRALPSL
                     AGLNRCGKSCRLRWTNYLRPDIKRGNFTEDEEKLIIHLHSHLGNKWSAIATHLPGRTD
                     NEIKNFWNTHLKKKLLQMGIDPVTHQRRTDHLDILANLPQLLAIAANNIGATNLINPS
                     FLDMNLSALMSPSDATQIAKFQLLQNILQVLSTNTSTSTTMPQNIDPFYAVQLSEYLK
                     LNPHQLQNLQELAMNDQTPSSSSIPSFSNHDFVSQSYPNLEDFESVPPLVPASPEPLS
                     QSQSQSQSNQMNIQVGNATNILKQSDHHLNSSTTLDANWQDLMDDEASGSYWKDVIE"
     misc_feature    67..>447
                     /gene="LOC139841829"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03091"
                     /db_xref="CDD:215570"
ORIGIN      
        1 atttcttcac caccaaacct catccaatat gtacatgttt gaattatgtg tacaggttta
       61 taaatgatgg gaagatcatc aagcagcgat gaaaacggac tcaagaaggg tccatggaca
      121 cctgaagaag atcaaatgct tatcgattat atcgagcgta atggacatgg aagttggaga
      181 gcgttaccat cacttgctgg acttaatagg tgtggtaaaa gctgtcgttt gagatggact
      241 aattatcttc gtcctgatat caaacgagga aattttaccg aagacgaaga gaaactcatc
      301 atacacctcc attctcatct cggaaacaag tggtcagcta tagcaacgca tcttccagga
      361 agaacagata acgagattaa gaatttttgg aacactcact taaagaagaa attacttcaa
      421 atgggaattg atccagtcac gcatcaacga agaaccgatc atcttgacat ccttgctaat
      481 ctgccacaac ttttggccat tgctgctaat aatataggag ctacaaatct cataaatcca
      541 tcattcctag atatgaactt aagcgcactt atgtcgccat ctgatgcaac acagatagcc
      601 aaatttcaat tgcttcaaaa catactacaa gttttgagta ccaacacatc tactagtact
      661 acaatgcctc aaaatattga cccattttac gctgtccaat tatcagaata ccttaaactg
      721 aacccacatc agttacaaaa ccttcaggaa ttagccatga atgatcagac tccatcttca
      781 tcaagtattc cttcattttc gaatcatgat tttgtctctc aaagttaccc gaacttagaa
      841 gattttgaat ctgttccacc actagtgccg gcctcaccgg agcctctcag tcagagtcaa
      901 agtcaaagtc aaagtaatca aatgaatatt caagttggaa acgccacaaa tattctaaaa
      961 caaagtgatc atcatctgaa ttcttcaact actcttgatg ctaattggca agatcttatg
     1021 gatgatgaag ctagtggtag ctattggaaa gatgtcattg agtaa
//
LOCUS       XM_071832025            1305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139841830), mRNA.
ACCESSION   XM_071832025
VERSION     XM_071832025.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1305
                     /gene="LOC139841830"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139841830"
     CDS             1..1305
                     /gene="LOC139841830"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071688126.1"
                     /db_xref="GeneID:139841830"
                     /translation="MAKALFKLFDLWDSDDEDELMILRELAEELDAEEAAAEEAAVEE
                     AANNVRVPRTRIYIRRDRELACDNLYKHYFSDNPVYPETRFKRRFRMSSRLFKRIVND
                     IINYDVDPLPLHFEYFKQKNDAIGRQGFTTIEKCTSAIRQLAYGTTADMFDEYLQMAE
                     GTSILCLNSFCKCVLELYVDEYLRKPTSSDIAHLYSAHEEKHGFKGMLGSIDYMHWKW
                     KNCPNAWKGQYTSDHQGHPTLVFEAVASYDTWIWHAFFGATGVNNDVNVLNQSSLFDD
                     IKNGNAPFAPFTVNGIEYTNGYYLADGIYPDWSTLMKAYSTPTDEPRAKFKRFQESAR
                     KDVERTFGILQGRFHILQMAGRPHTVNKLRRILYRCALLHNMIVEDNGFNISWLEEEL
                     LGTDEANPNYVRNRSRSREVREQEIRDRNIHDQLRNDLTEHI"
     misc_feature    538..1146
                     /gene="LOC139841830"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcaaaag ctttgtttaa actttttgat ttatgggatt cggatgatga agatgagttg
       61 atgattttac gagaattggc cgaagaatta gacgctgaag aggctgcagc agaagaggct
      121 gcagtagaag aggctgcaaa caatgtacgt gttccacgaa ctcgaattta tattcgtaga
      181 gatcgtgaac tagcatgtga taatctatac aaacactatt tctcagataa tccagtttat
      241 cctgaaacta gatttaagag acgttttaga atgagtagta gattatttaa gcgtatcgtg
      301 aatgatataa tcaattacga tgtcgatcca ttaccacttc attttgaata ttttaaacaa
      361 aaaaatgatg ctattggtcg acaaggtttt actacgatag agaaatgtac atccgcgatt
      421 cgtcaattgg cttacggtac aacagcggac atgtttgacg aatatttaca aatggctgaa
      481 ggtacatcaa ttctctgtct caatagcttt tgtaaatgtg tgttagaact atatgttgat
      541 gaatatttga ggaaaccaac gagtagcgat atagctcatt tgtatagcgc gcacgaagaa
      601 aaacatgggt ttaagggaat gcttggaagc attgattaca tgcattggaa atggaagaat
      661 tgtccaaatg cttggaaagg gcaatatact agtgaccatc aaggtcatcc gaccttagtt
      721 tttgaagcag ttgcttcata tgatacatgg atttggcatg cattcttcgg tgccacaggt
      781 gtaaacaacg atgttaatgt tttgaatcaa tcttcgttgt ttgatgacat taagaatgga
      841 aatgcgccat ttgccccatt tactgttaat ggaattgaat acacaaatgg ttattattta
      901 gcggacggta tttatccaga ttggtcaaca ttgatgaagg catattcgac cccaaccgac
      961 gagccacgtg caaaatttaa aagatttcaa gaaagtgcgc gtaaagatgt tgaaagaaca
     1021 ttcggtattc ttcaaggtag attccatatt ttacaaatgg ctggacggcc acacaccgtc
     1081 aacaagttga ggcggatatt gtatcgttgt gcgctcttgc acaacatgat agtcgaggat
     1141 aatggcttca acatttcatg gctagaggaa gaattacttg ggactgatga agctaatcct
     1201 aactatgtaa ggaatcgatc tagaagtcgt gaagttagag aacaagaaat aagagataga
     1261 aacattcacg atcaacttcg aaatgatctc actgaacaca tctga
//
LOCUS       XM_071832026            2091 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NPG1 (LOC139841831),
            mRNA.
ACCESSION   XM_071832026
VERSION     XM_071832026.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2091
                     /gene="LOC139841831"
                     /note="protein NPG1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139841831"
     CDS             1..2091
                     /gene="LOC139841831"
                     /codon_start=1
                     /product="protein NPG1"
                     /protein_id="XP_071688127.1"
                     /db_xref="GeneID:139841831"
                     /translation="MSGESASSKHVVETDQRQICANGSCVQINSLEAQLDAGKFDEAE
                     SDLREGLSLNSEEARALLGRLEYQRGNVEAALKVFESIDIHATIERLESISTDKIPKK
                     SRDSGLSGPQQGAILLLEAIYLKTKSLQKLDRINDAAEECKKVLDAVEKIFPQGIPDA
                     FVETKLQETISRVVELLPQLWAEAGSYQEAVSSYRRSLLTQWNLDNNSCARIQLNFAV
                     LLLYSGVEAGPPTTTTKVEGTYVPKSNLEEAILLLMICMRKFSLGQVKWDPRVVEHLT
                     FALSICNQTPILAKQLEEVIPGVIHRVDLWKTLALCCSAVNDRKTALDLLKKALHKHE
                     RPFDIPSLLLAAKICSEDGFLAAEGAEFAQRAVNNCSKKSDEHLKGVCLRVLGLCYGK
                     QASVSSSDYERSNLQSKALKSLDEAISLEPENSDMVFELAIQYAMHRNLNNALRLAKQ
                     YIDVTGGSMLRGWRLLALILSAQQRFQEAEVVTDAALDETGKWDQGPLLRLKAKLRIA
                     QSRHMDAIETYRHLLALIQAQKKTYGPLHSTHEIENDRVDEYEVWQGLANLYSSLARW
                     KDAEICLGKAREIIECSSKTLHTEGTIYQRRGEIDEALATYVNSLLVEASYVPSKISI
                     GAIMYDRGLPMLPVARTMLSDALRLEPTNRMAWLHLGFVHKLDGRLSDAIDSFQAASM
                     LEESDPIESFSSIF"
     misc_feature    <94..>240
                     /gene="LOC139841831"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; Region: BepA;
                     COG4783"
                     /db_xref="CDD:443813"
     misc_feature    1144..1257
                     /gene="LOC139841831"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(1150..1155,1162..1167,1171..1173,1276..1278,
                     1285..1290,1297..1302,1306..1311,1381..1383,1390..1395,
                     1402..1407,1414..1416)
                     /gene="LOC139841831"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1201..1464
                     /gene="LOC139841831"
                     /note="Cytochrome c-type biogenesis protein CcmH/NrfG
                     [Energy production and conversion, Posttranslational
                     modification, protein turnover, chaperones]; Region: NrfG;
                     COG4235"
                     /db_xref="CDD:443378"
     misc_feature    1270..1362
                     /gene="LOC139841831"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1492..>2064
                     /gene="LOC139841831"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; Region: Spy; COG3914"
                     /db_xref="CDD:443119"
     misc_feature    1492..1572
                     /gene="LOC139841831"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1645..1737
                     /gene="LOC139841831"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1750..1836
                     /gene="LOC139841831"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    order(1753..1755,1762..1767,1774..1779,1783..1785,
                     1855..1857,1864..1869,1876..1881,1885..1890,1963..1965,
                     1972..1977,1984..1989,1996..1998)
                     /gene="LOC139841831"
                     /note="putative protein binding surface [polypeptide
                     binding]; other site"
                     /db_xref="CDD:276809"
     misc_feature    1849..1947
                     /gene="LOC139841831"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    1960..2040
                     /gene="LOC139841831"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
ORIGIN      
        1 atgtcagggg aatcagcatc atcaaagcat gttgttgaaa cggatcaacg acaaatatgc
       61 gcaaatggca gttgtgtgca aataaatagc cttgaagcac aacttgatgc cggtaaattc
      121 gatgaagccg aatccgattt gcgtgaaggt ttatcgctca actcagagga agcacgagct
      181 cttcttggaa gattggaata tcaaagggga aatgtagaag ctgctcttaa agtatttgaa
      241 agtattgata ttcatgctac tatagagcgg ctggaatcaa tttcgactga taaaatacct
      301 aaaaagtctc gtgattcggg actttcgggc ccacagcagg gtgccattct gttacttgaa
      361 gccatatatc taaaaaccaa gtctcttcaa aagcttgaca ggataaatga tgctgccgaa
      421 gagtgtaaaa aagtgcttga tgcagttgag aaaatattcc cacaaggtat tcctgatgct
      481 tttgtcgaaa caaaattaca agaaacgatt agtcgagtag ttgagcttct tccgcaatta
      541 tgggccgaag ctggtagcta tcaagaagct gtttcctctt accgacgttc cctcctcacc
      601 caatggaacc ttgataataa tagttgtgcg cgaattcagt taaactttgc agtacttttg
      661 ttgtatagtg gagttgaagc gggcccgcct actacaacga caaaagttga gggtacatat
      721 gtgccaaaaa gcaacttaga agaagcgatt ttgcttttaa tgatttgcat gaggaagttc
      781 tcactcgggc aagtgaaatg ggacccgcgt gttgtagaac accttacgtt tgctctttcg
      841 atttgcaatc aaactcctat tttggcgaaa cagttagaag aagttattcc gggtgtaatt
      901 catcgtgtgg atctttggaa aacgttggcg ctttgttgta gtgcggttaa tgatagaaaa
      961 accgcccttg atttgttgaa aaaggcactt cataaacatg aacgaccctt cgatatacct
     1021 tcgttgttat tagctgctaa aatatgtagc gaagatggtt ttttagctgc agagggagcc
     1081 gaatttgctc aaagggcggt aaataattgt tcgaagaaaa gcgatgaaca tttaaaaggt
     1141 gtatgtctaa gagttttagg actttgttat ggtaaacaag cgagtgtttc atcatctgat
     1201 tatgaacgtt caaatcttca atcgaaagca ttgaaatctt tagacgaagc aatttcattg
     1261 gagcctgaga attcggatat ggtgtttgag ttagcaatac aatatgcaat gcataggaac
     1321 ttgaataatg cattaaggtt agctaaacag tacattgatg taactggtgg gtccatgttg
     1381 cgcggttgga gattacttgc tttgatttta tctgcgcaac aacggtttca agaggcagag
     1441 gttgttactg atgctgcgtt agatgaaact ggcaagtggg atcaaggacc acttttgaga
     1501 ttaaaagcga aattgagaat agcacaatcg cgacacatgg atgctattga aacgtatcga
     1561 catttacttg cattgatcca agctcaaaaa aaaacttatg ggccacttca tagtacacat
     1621 gagattgaaa acgatagagt agacgagtat gaagtgtggc agggtctagc gaatttatat
     1681 tccagccttg cgcgttggaa ggacgccgag atatgtttgg ggaaagcaag agaaattata
     1741 gaatgctctt caaagacgct gcatactgag ggaacaatat accaaagacg tggagaaata
     1801 gatgaagctt tagccacata tgtgaattct ctattagtag aggcaagtta tgtaccttca
     1861 aagatcagta tcggggctat tatgtatgat cgaggcttac ccatgttgcc tgtggctcga
     1921 accatgctct cagatgctct acggctcgaa cccaccaatc gtatggcttg gcttcactta
     1981 ggatttgttc ataaacttga tggacgttta tcggatgcca ttgacagttt ccaggcagca
     2041 tccatgcttg aagagtctga tcctatcgag agctttagct caatatttta a
//
LOCUS       XM_071832027             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841832), mRNA.
ACCESSION   XM_071832027
VERSION     XM_071832027.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139841832"
                     /note="uncharacterized LOC139841832; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841832"
     CDS             1..555
                     /gene="LOC139841832"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688128.1"
                     /db_xref="GeneID:139841832"
                     /translation="MERHGVHYERCAKEVLGVEIGTSRAHKSSRESWWLSDDVQTKVA
                     LKQTRFRELINFGEGTPAERTRAEERYKEAKREAKKAVAIAKDKAYEDLYRKLDSKEG
                     ANNVYRIAKARERRSRDLVNVKYIKDEAGQSIVREDLIRKRWEEYFASLFSRERPDQN
                     GELQEGREFQNNCFCTRINQEEVR"
ORIGIN      
        1 atggaacgac atggcgtcca ctatgagaga tgtgcaaaag aggtcttagg ggtggaaata
       61 gggacatcga gagcccataa gagtagtaga gaatcgtggt ggcttagtga cgatgtccaa
      121 acgaaagtcg cgctaaagca gacaaggttt agggagctca ttaactttgg agaagggaca
      181 cctgcagaga gaactagggc agaagaaaga tataaagaag ctaaaagaga agcaaagaag
      241 gccgtagcaa ttgcaaaaga taaagcatac gaagatttat ataggaaact agactctaaa
      301 gagggagcta ataacgtata taggatagct aaagctaggg agagaagaag cagggactta
      361 gttaatgtca aatatatcaa ggatgaagcg ggtcaaagta tagtgagaga agaccttatt
      421 aggaaaagat gggaagagta ttttgcatcc cttttcagta gggaaagacc cgaccagaat
      481 ggggaactac aggagggtcg tgagtttcag aataattgtt tctgcacgag gattaaccag
      541 gaggaagtta gatag
//
LOCUS       XM_071832028            2211 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841834), mRNA.
ACCESSION   XM_071832028
VERSION     XM_071832028.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2211
                     /gene="LOC139841834"
                     /note="uncharacterized LOC139841834; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841834"
     CDS             1..2211
                     /gene="LOC139841834"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688129.1"
                     /db_xref="GeneID:139841834"
                     /translation="MSENKFHPAFTVSNIKNHIPITLEMDKAKYSSLSELFKITCRAY
                     DVIEHIVPTSADSSVTTDSSTNSSISWSRLDAVVLNWIFGTISIDLLENIFEADSTAA
                     KNGSELKIYFKIIKILELFIFIGNLLTSSLIISPAYCQELKSIADQLGNVGDKVFNQK
                     MVLQLIAGLNDNFDTIGSQLSYITPLPSFYQACSMLLMEETRKQKQTLPPSTPTDAAL
                     ITTSTNSPSPRPSSQANYQYRNSNRGRGGGNRGNSRGRQGNRGRGRHFNQTSGSNWMN
                     QPPWAWKNNPWAYPPCPYPTNNWVRPNSNQTRVLGPRQNQTHSVTSEASYPTDIENAL
                     HTMTLHSPEDTWYMDTGASSHMASTSGNSEGNPILRCNSTGDLYPLTASMLHQIKKSP
                     STFIALSSNIWHHRLGHPSNDILRSLKNKNYIQFNKPMSSTDTNIHPTFLHTTSGPPT
                     PTSPITRSVQSTTPSDPLNIIPRPIAPQSTGSPPSGPTTPTSPQTELPQSGPISPHNI
                     PSPTTSPSPIRSSPTDVDTTLLSIPSPPIHQSPTPNSTPTPTTTLPPTRTMTTRSMVG
                     TFKPKTQFNLSVSSTLSPLPTTPKEAISNQNWNKAMTDEYQALMENKTWVLIPRTNDM
                     KIIRSMCIFRHKFKSDGSLKRYKARLVGDGRTQTVGVDCNDTFSPVVKPATIRIVLSI
                     TLSRSWAINQLDVKNAFLHGKLNETVYMHQPYGFRDQHQPDHVCLLKRSLYGLK"
     misc_feature    265..618
                     /gene="LOC139841834"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    1126..>1272
                     /gene="LOC139841834"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1312..>1614
                     /gene="LOC139841834"
                     /note="Atrophin-1 family; Region: Atrophin-1; pfam03154"
                     /db_xref="CDD:460830"
     misc_feature    1834..>2208
                     /gene="LOC139841834"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgtcagaaa ataagttcca ccctgcattt acagtctcaa atatcaagaa tcatatccct
       61 attacccttg aaatggacaa ggccaaatac tcctccttgt ccgaattatt taaaatcacc
      121 tgcagggctt atgatgtgat agaacacatc gttccaacat ctgcagactc ctctgttacc
      181 actgattcat cgaccaattc ctctatttct tggtctcgtt tagatgcagt ggtgctcaac
      241 tggatctttg gaacaatctc cattgatctc ctcgaaaaca tcttcgaggc agattcgact
      301 gctgcaaaaa atggaagcga attgaagatt tatttcaaga taataaaaat actagagctc
      361 tttatcttca taggcaattt actaacctca agcttgataa tttctcctgc atattgtcaa
      421 gagctcaaat cgatcgccga tcaactaggg aatgttggag ataaagtctt caatcaaaag
      481 atggttcttc aattgatagc aggcttgaat gataacttcg acacaattgg ttcccaattg
      541 tcttacatca cccctttgcc ttcgttttac caagcttgtt ccatgctatt aatggaggaa
      601 actcgcaaac agaagcaaac cctaccacca tctacaccta cggatgccgc tctaatcacc
      661 acatccacca attcaccgtc acccagaccc tcttctcagg ctaattatca gtatcgaaac
      721 tccaatcggg gtcgtggtgg tggtaatcgt ggaaactctc gaggtcggca aggtaatcgg
      781 ggaagaggtc gacacttcaa tcaaaccagt ggttctaact ggatgaatca accaccctgg
      841 gcttggaaaa acaacccttg ggcctatcct ccatgcccgt atcccactaa taattgggtt
      901 aggcccaatt ctaatcagac acgtgtatta ggcccacgtc aaaatcagac ccactcggtt
      961 acttcagaag cttcttatcc tactgacatt gaaaatgcac tacataccat gaccctccac
     1021 tcccccgagg atacatggta catggatact ggagcatctt ctcatatggc atccacctca
     1081 ggaaattccg aaggcaaccc aattctcaga tgtaacagca cgggcgatct ctaccctctc
     1141 accgcttcca tgctacacca aataaagaaa tctccatcaa catttattgc tttatcttct
     1201 aatatatggc atcatcgtct tggacatcca agcaatgata ttttacgttc tcttaagaat
     1261 aaaaactata ttcaatttaa taaacctatg tcttctactg atacaaacat acatcccacc
     1321 tttttacata caacatctgg gccaccaact cctaccagcc cgataactag atcggttcag
     1381 tccactacgc cctctgatcc actaaatatt attcctagac caatcgctcc acaatccact
     1441 gggtcgcctc catctggccc aactacgcct accagccctc aaactgaact gcctcaatct
     1501 ggcccaattt cgccacataa tataccgagc ccaactactt caccttcacc tattcgttcc
     1561 tcacctactg atgttgatac aactctctta tccatacctt cacctcctat acatcaatct
     1621 ccaactccta attctactcc aacacccacg actactctcc ctcccacacg cactatgact
     1681 actcgaagca tggttggcac cttcaaacca aaaactcaat tcaatctctc ggtttcgtct
     1741 actctttctc ctcttccaac cacacccaaa gaagccatct cgaaccaaaa ttggaataag
     1801 gccatgaccg atgaatatca agcacttatg gaaaataaga cttgggttct tataccacga
     1861 actaatgaca tgaagattat acgtagcatg tgcattttta ggcataaatt taaatccgat
     1921 ggatctctaa aacgctacaa agctcgatta gtgggtgatg gtcgtacaca aactgttggt
     1981 gttgattgta atgatacttt tagtcccgtt gtcaaacccg ctactattcg cattgttcta
     2041 tcgattacat tgtcaaggtc gtgggcaatt aatcaactag acgttaaaaa tgcatttctc
     2101 cacgggaaac ttaatgagac agtttacatg catcaacctt atggttttcg ggatcaacac
     2161 caacccgatc acgtgtgcct tttaaagcga tctctatatg gtttaaaata a
//
LOCUS       XM_071832029             375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841835), mRNA.
ACCESSION   XM_071832029
VERSION     XM_071832029.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..375
                     /gene="LOC139841835"
                     /note="uncharacterized LOC139841835; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841835"
     CDS             1..375
                     /gene="LOC139841835"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688130.1"
                     /db_xref="GeneID:139841835"
                     /translation="MPTETTLFRLLYGKVHHLPAFWSLKTSNLDLKEVGRLRLSQLNE
                     LEELRLDAYENSLISKERTKKWSDSRLKDPKEFMEGDRVLLFNSRFRLFFRKLKSKWS
                     RRFIVRKVYSHGAVDLVNSKGE"
ORIGIN      
        1 atgccaaccg aaaccactct ttttcgatta ctttatggta aagtgcatca tctgccggct
       61 ttttggtctc ttaaaacgag caatcttgat cttaaggagg tgggacgtct tcgtttgagc
      121 caattaaacg agttagaaga gttaaggctc gatgcttatg aaaattcgtt gattagtaag
      181 gaaaggacaa agaagtggag cgatagtcgt ttaaaagatc ctaaagaatt tatggaaggg
      241 gatcgtgtgc ttcttttcaa ttcacgtttc cgtttgtttt tcagaaagtt aaaatctaaa
      301 tggtcgcgac ggtttattgt tcgtaaggtt tattcccatg gggcggttga tttggttaat
      361 tcaaaagggg aatag
//
LOCUS       XM_071832030            1764 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841836), mRNA.
ACCESSION   XM_071832030
VERSION     XM_071832030.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1764
                     /gene="LOC139841836"
                     /note="uncharacterized LOC139841836; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841836"
     CDS             63..1607
                     /gene="LOC139841836"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688131.1"
                     /db_xref="GeneID:139841836"
                     /translation="MASPHGIKLAVHLIATHFGETVSKVCECLLRKGTLSLVQVIRYA
                     ELSEQNVTNALLTLIQHNCVQAFTIQHSGGFGEAPKDVTQYMALHDNIIHHMRFPKFS
                     AIVSDEYGQECMEIIKELLEHGRLSLNQIRDRYMDKHKVDEPSGDNNTSVNVIHENFN
                     KLAQARYIERCPAHEPFLPSSEIGDVTRTVEERALRTEASMESIRFLVEADTWNNGAL
                     DGDNKKNSSTEIVGQKRKQPETEVWATNRNKEILWRVNFEEFVRRLRHKSCVSHVTTR
                     MDSVVGIVLNAIFEATRRDETKVKMEKTVPLTLETIYAEATKSQQGRTLTLERVRASL
                     VQLGCELPTIRLDETYGIDLKKFIDQAQAQEVESIVLKKYGREAYRIFRLLSERERLY
                     DTDKISSTTFVEKKDALKILFQLWKDDVLHMERIKIDAQKTEILLWKLNKRAICEQTL
                     DDMYHAALNLRLRLVHELKLAKDSLQLTVGDEVFKTRKQIVDKPKVLESSLMILDDAI
                     MLFSAF"
     misc_feature    84..266
                     /gene="LOC139841836"
                     /note="RNA polymerase III subunit RPC82 helix-turn-helix
                     domain; Region: HTH_9; pfam08221"
                     /db_xref="CDD:400500"
     misc_feature    531..>1001
                     /gene="LOC139841836"
                     /note="RNA polymerase III subunit RPC82; Region:
                     RNA_pol_Rpc82; pfam05645"
                     /db_xref="CDD:398977"
ORIGIN      
        1 tttttctcca ttctattgtt gcgtttatct ttccggccaa ccgccgtaca caaccaccga
       61 acatggcgtc gccgcacgga attaaactcg ccgtccatct catcgctact catttcggcg
      121 aaaccgtctc taaagtatgc gaatgtctat tacgtaaagg aacattatcg ttagtgcaag
      181 tgatacgata tgcagagctc agtgaacaga acgtcacaaa tgctttactt acgttaattc
      241 aacataattg tgttcaagca ttcactattc aacattcagg tggatttggg gaagcaccaa
      301 aggatgtaac tcagtatatg gccttacatg acaatatcat ccaccatatg aggttcccta
      361 agttttcagc tatagtttca gatgaatatg gacaagaatg catggagatt atcaaagaat
      421 tacttgaaca tggtaggtta tcattgaatc agattaggga tagatatatg gataagcata
      481 aggttgatga accaagtgga gataataata cttctgttaa tgtaatacat gaaaacttca
      541 ataaacttgc tcaggcacgc tatatcgaaa gatgccctgc tcacgaacca tttcttccat
      601 catcagagat aggtgatgta acacgaactg tagaagaacg tgcactaagg actgaggctt
      661 caatggaatc aataagattt ttagttgaag cagatacatg gaataacggg gcccttgatg
      721 gcgataataa aaaaaattct tcaaccgaaa ttgtcgggca aaagcgcaag caacccgaaa
      781 cagaagtttg ggctacaaat agaaataaag aaattctttg gcgtgtgaat tttgaggaat
      841 tcgttcgacg tcttcgtcat aagtcttgtg tttcccatgt gacaacacgt atggatagtg
      901 tagtcggcat cgttttaaat gcaatatttg aggcaactag aagagatgaa actaaggtca
      961 agatggaaaa aacagttccc cttaccttgg aaaccatata tgcggaagca acgaaaagtc
     1021 aacaaggccg gactttgact ttagagcgtg ttagagcttc ccttgtccag ctgggttgtg
     1081 aactcccaac aatcaggcta gacgaaacat atggcattga tttgaagaaa tttattgatc
     1141 aggctcaagc ccaggaggtc gaatctattg tgctgaaaaa atatggaaga gaagcttata
     1201 ggatattcag gttactatca gaacgtgaaa ggctttatga taccgataag atatctagca
     1261 ctacattcgt tgaaaagaaa gatgctttaa agattctttt tcagctatgg aaagatgacg
     1321 ttttgcacat ggagagaata aaaatcgatg ctcaaaagac ggaaattttg ctgtggaagt
     1381 tgaataagcg tgctatttgt gaacaaactt tagatgacat gtatcatgct gccctcaact
     1441 taagactccg ccttgttcat gagcttaaac tagcaaaaga cagtctccaa ttgaccgttg
     1501 gcgatgaggt gtttaaaaca cgcaagcaga tcgttgacaa accgaaagtg ctagaatctt
     1561 ccctaatgat tcttgatgat gccatcatgc tatttagtgc cttttaagca agaaacatag
     1621 accaacaaac ataatagtta ttggatacaa tagagttttt attatttttg atgattgtgt
     1681 tacaatattc ttgcatatga cagtagttta ctttgcaaga tactattgga ctttgtacac
     1741 ttctcaaact cttaattaat aact
//
LOCUS       XM_071832031             828 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable caffeine synthase
            MTL3 (LOC139841837), mRNA.
ACCESSION   XM_071832031
VERSION     XM_071832031.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..828
                     /gene="LOC139841837"
                     /note="probable caffeine synthase MTL3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:139841837"
     CDS             1..828
                     /gene="LOC139841837"
                     /codon_start=1
                     /product="probable caffeine synthase MTL3"
                     /protein_id="XP_071688132.1"
                     /db_xref="GeneID:139841837"
                     /translation="MAVATLSELLHMNSENEESSYANNSSLQESVIKKAQMILKETIK
                     GITDSDGFPRCFCIADLGCSSGPNTLLVISNIIDEVHGVCKEKNLEAPQFHICLNDLF
                     LNDFNSIFKSLPMFYAKYNVDKEGSSGRCFISAVPGSFYGRLFSDKSMHFFHSSTSLQ
                     WLSQAVYPEKYQSYIGTKLKVYGFNPTIWEIPKGLENNNLNIYMSNTSPPIVCEIYKK
                     QFEKDFTKNIWLQRWENFVLFFGDDTSSLKTFGDDICGAFCGAPAPLKVKRKKVEFN"
     misc_feature    121..>678
                     /gene="LOC139841837"
                     /note="SAM dependent carboxyl methyltransferase; Region:
                     Methyltransf_7; pfam03492"
                     /db_xref="CDD:460946"
ORIGIN      
        1 atggctgtag caacactatc agagctccta cacatgaata gcgaaaatga agaaagcagc
       61 tatgcaaaca actcatctct tcaagaatcc gttataaaaa aagcgcagat gatactaaag
      121 gaaacgatca aaggtataac cgattcggat ggttttcctc gatgtttctg tatagccgat
      181 ttggggtgtt cttcaggacc aaacacacta ttagttatat ctaatattat tgatgaagtt
      241 catggggtgt gtaaagaaaa gaatcttgaa gccccacaat ttcatatttg cttaaatgat
      301 ctatttctga atgactttaa ctcgatattc aaatcgttac cgatgtttta tgccaagtat
      361 aatgtggata aagaagggag ctcgggtcga tgttttattt ctgccgtgcc tggttcattt
      421 tatgggaggt tgttttcaga caagagtatg cacttttttc attcatctac tagcctccaa
      481 tggctttctc aggctgtata ccctgaaaaa taccaatcct acattgggac aaaactgaaa
      541 gtatatggct ttaaccctac tatatgggag atcccaaaag gcctcgagaa caataatcta
      601 aatatctaca tgtcaaacac aagccctcca attgtatgtg aaatctacaa gaaacaattt
      661 gaaaaggatt ttacaaaaaa tatttggctc caaaggtggg aaaatttcgt gctatttttt
      721 ggggacgaca cgtcgtctct aaaaactttt ggggatgaca tttgtggcgc cttttgtggc
      781 gcaccagcgc cactaaaggt caaacgaaaa aaggttgaat tcaactag
//
LOCUS       XM_071832032            1808 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841838), mRNA.
ACCESSION   XM_071832032
VERSION     XM_071832032.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1808
                     /gene="LOC139841838"
                     /note="uncharacterized LOC139841838; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841838"
     CDS             306..1808
                     /gene="LOC139841838"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688133.1"
                     /db_xref="GeneID:139841838"
                     /translation="MTIDKNWIGLRNRVSSEFLTGLNAFIARCENHLNDIGKCQCPCI
                     TCGNTRRHTPREIYQHIIRNGFEPSYKIWRHHGEELPPPPVVHNTPDPLRNFLHDVQG
                     ETILEFTEEGSNDDETMNDTIETPSAGLEDLIDATQTELYPGSRLSSLEFLAKLTHLK
                     VLNRWTNTAFDQLLELLIQSHPPDNTIPKSYYETKKWMKKIGLGYEAIHACKNDCCLF
                     YKEYKDLDNCPICEESRWKAERTTGKKVANKVLRYFPITPRLKRLYSSRHTAKYMTWH
                     VTGQCKEEGKMRHPVDGRAWKEIDQRYPDFAQEPRNVRLGLAADGFNPFGNMNTAYSM
                     WPVVLTTYNTPPWICMKESSLMLTMLIPGPKSPGKDIDVYLRPLVDELKALWSEGVIT
                     RDSVTNTNFIMKAILIWTINDYPARSSLSGWSGQGYKACSICNEDTPAMRVQNKIVYV
                     SNRQNLEMNHPYRQSLEFNGKVDKTKKPRKFNYSRGVRCRRSVNNMFNVS"
     misc_feature    318..539
                     /gene="LOC139841838"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    1155..1748
                     /gene="LOC139841838"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 gccttttgtg gcgcaccagc gccactaaag gggagaataa tcagagaaga agtaggtgta
       61 cttgtgtact ttaagtttat actttgaact caactcctcc tttatgtttt gaaagatact
      121 cgctatcaac cctacacaat tatcttttat catttccaaa attagaatac gtagaacgga
      181 gtatgaaaca aatacatgat ggatattaga ttattaattt tattaactca gtaaattgtt
      241 aacatgaata tgcttattgg tcttaacgtg aaaatgatga agttcacttg atttgtgtag
      301 tttatatgac gattgataag aattggattg gattacgaaa tcgagttagt agtgagtttc
      361 ttactggtct taacgcgttt attgcgaggt gtgaaaacca tttaaatgat attggtaaat
      421 gtcagtgccc gtgtattacg tgtggtaata cgagaagaca tacacctcgt gaaatttacc
      481 aacatattat acgcaatggg tttgaacctt cttataagat ttggcggcat cacggtgaag
      541 aattaccacc gccgccagta gtacacaaca caccagatcc ccttagaaat ttcttgcacg
      601 atgttcaagg ggaaacgatt ttagaattca ccgaggaagg atcgaatgac gatgagacta
      661 tgaatgacac gatcgaaact ccgagtgcag gtctggagga tttaattgac gccacccaaa
      721 ccgagctata tcctggttcc aggctgtcct cattagagtt tttagccaag ttaacacacc
      781 ttaaggtctt gaacagatgg acgaatactg catttgacca attgttagaa ttgctcatac
      841 aatcacatcc cccagataac acaattccaa aatcatatta cgaaactaag aagtggatga
      901 aaaagatcgg tttagggtat gaggcgatac atgcttgtaa gaatgattgt tgtttgtttt
      961 ataaggaata caaagatttg gataattgtc caatatgtga ggagagtaga tggaaagcgg
     1021 aacgcacaac gggcaagaaa gttgctaata aagttttgcg ttattttcct ataactccca
     1081 gacttaaacg tttgtatagt tccagacaca ctgcaaagta tatgacttgg catgttactg
     1141 gacaatgcaa ggaagagggt aagatgcgtc atccggtaga tggtcgagcg tggaaagaaa
     1201 tcgaccaaag atatccagat tttgcacaag aacccagaaa cgttcgatta gggttggctg
     1261 ccgatggttt caatccattc ggcaacatga atacggctta tagcatgtgg ccagtagtac
     1321 tgacaacata caatacgcct ccgtggatat gtatgaaaga aagttctctc atgttgacta
     1381 tgctaattcc tggtcctaaa tcacctggaa aagatatcga tgtttacttg aggcctttgg
     1441 ttgatgagtt gaaggcttta tggtccgaag gagtgattac gagagactca gttacaaaca
     1501 cgaattttat aatgaaagcc atacttatct ggaccatcaa cgattatcct gcccgtagta
     1561 gtttatcagg ttggagtggc caaggttata aagcatgctc tatatgtaac gaggacactc
     1621 ctgcaatgcg tgtgcaaaac aaaattgttt acgtaagtaa tagacagaac cttgaaatga
     1681 atcaccctta cagacaaagc ttagaattca atggtaaggt tgataaaacc aaaaaaccta
     1741 gaaagttcaa ctatagcaga ggggtacgtt gccgacgaag cgttaacaac atgttcaatg
     1801 tctcttga
//
LOCUS       XM_071832033             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides agamous-like MADS-box
            protein AGL11 (LOC139841839), mRNA.
ACCESSION   XM_071832033
VERSION     XM_071832033.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139841839"
                     /note="agamous-like MADS-box protein AGL11; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841839"
     CDS             1..585
                     /gene="LOC139841839"
                     /codon_start=1
                     /product="agamous-like MADS-box protein AGL11"
                     /protein_id="XP_071688134.1"
                     /db_xref="GeneID:139841839"
                     /translation="MGRGKVELKRIENPTNRQVTFSKRRDGLLKKSIELSILCDAQVA
                     LIVFSPSGKPYYYSSHDMDSTIRRYRNEKGLQNTTSHGVTTVEVLKNEMDEMKKTIDT
                     LETKHRHLLGEDIMTLWMKELKQLERQLRIGVDRVRAKKWRLLSEQVGALKRNHKTLQ
                     EENSILQKKIKLHELLNEGDENSGLDSFKLNKAA"
     misc_feature    4..228
                     /gene="LOC139841839"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; Region:
                     MADS_MEF2_like; cd00265"
                     /db_xref="CDD:238165"
     misc_feature    order(4..12,16..18,22..24,37..39,43..45,55..60,67..72,
                     76..81,88..93,97..102,112..114)
                     /gene="LOC139841839"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     misc_feature    order(61..63,82..87,94..99,103..108,115..117,130..132,
                     136..138,142..144,160..162,166..168,184..186,193..198,
                     205..207,214..219)
                     /gene="LOC139841839"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238165"
     misc_feature    175..177
                     /gene="LOC139841839"
                     /note="putative phosphorylation site [posttranslational
                     modification]; other site"
                     /db_xref="CDD:238165"
     misc_feature    244..513
                     /gene="LOC139841839"
                     /note="K-box region; Region: K-box; pfam01486"
                     /db_xref="CDD:460228"
ORIGIN      
        1 atgggaagag gtaaagttga gttgaagaga attgagaacc caacaaacag acaagtgacc
       61 ttctcaaaaa gaagagatgg tttgcttaaa aaatcaattg aactctctat tctttgtgat
      121 gctcaagttg ctcttattgt tttttctcca tctggcaaac cttattacta ctctagccat
      181 gacatggata gtactatcag gaggtaccga aacgaaaagg gtctacaaaa tacgactagt
      241 cacggagtta caactgtcga ggttttgaag aatgaaatgg atgagatgaa gaaaactatt
      301 gacacactgg aaacaaaaca taggcatttg ttaggagaag atataatgac attatggatg
      361 aaagaactga aacaactcga acgccaattg agaattggag ttgatcgtgt acgcgctaag
      421 aagtggcgtc ttttatcaga gcaagtaggc gcattgaaga gaaatcataa aactttgcag
      481 gaagaaaata gcattctgca gaaaaagatc aagctgcatg agctactgaa tgagggcgat
      541 gagaactcag ggttggattc atttaagttg aataaagctg catga
//
LOCUS       XM_071832034             731 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841840), mRNA.
ACCESSION   XM_071832034
VERSION     XM_071832034.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..731
                     /gene="LOC139841840"
                     /note="uncharacterized LOC139841840; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841840"
     CDS             1..546
                     /gene="LOC139841840"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688135.1"
                     /db_xref="GeneID:139841840"
                     /translation="MTHLGHNCPKDPYLGIFDSCEASLDPPSLIENFKNNHTFKKGGW
                     SGDKARVNHEKMLKLKEKYPERSDEVIMLEVLGKRRGYRRGVGKTLPGSASTSSSSST
                     CQTRRPPPPGSENPLLKEAVYDTFAFNNMAIPPQWQSFFPTPNQTQETEGEDEGDDDE
                     DMEESGASQSESDEENEDEAR"
ORIGIN      
        1 atgacccatt tgggtcataa ttgtcccaaa gacccgtatt taggtatttt tgattcgtgc
       61 gaggcctctc tggatcctcc gagtcttatc gaaaacttca agaacaacca cacttttaag
      121 aaaggtggat ggagtgggga taaagctagg gtgaaccacg aaaaaatgtt gaaattaaaa
      181 gaaaaatatc cggaaaggag tgatgaagtc attatgttgg aagttttagg caaacgtcgc
      241 gggtaccgtc gcggagtggg taaaacgtta cccggatcgg ctagtacatc atcttcatca
      301 tcaacttgtc aaacaagacg accaccacca ccgggttccg aaaacccatt gctaaaggaa
      361 gcggtatacg atacttttgc ctttaacaat atggcaatcc cgccccaatg gcaatctttt
      421 ttcccaaccc ccaatcaaac tcaagaaacc gaaggtgaag acgaaggtga tgacgatgaa
      481 gacatggaag aaagtggtgc gtctcaaagc gaaagtgatg aagaaaatga agatgaagca
      541 aggtaagttt gtaagtttgt ttgctattcg gatttggttt aagtttgtaa actttggata
      601 atgttttaag gttgtaaact ttgtgtcgga ttgtaatctt ttagtattcg gattaagttt
      661 gtaacggttg gataatgttt cggacatgtt ttaattaatg ttgagcttgt gtttgtgaaa
      721 tatattgtgt t
//
LOCUS       XM_071832035             546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841841), mRNA.
ACCESSION   XM_071832035
VERSION     XM_071832035.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139841841"
                     /note="uncharacterized LOC139841841; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841841"
     CDS             1..546
                     /gene="LOC139841841"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688136.1"
                     /db_xref="GeneID:139841841"
                     /translation="MIAKKVAIAREKLKAARDRQKMYDDPRRHPVSFNVGNHVYLKVS
                     LRNGVIRFSKRGKLYIGPFPIRVILNDQTVVLELPPEFAGIYNVFNVCYLRKCKVDVE
                     AQFLPIKDLKVDLSNKLVEEPIRVVDRKVTNLRKKEILMVLVEWKHILGSKLTWETEE
                     LMKTHYPHLFDQDQIPRTESL"
ORIGIN      
        1 atgatagcta agaaagttgc tatagcaaga gaaaagttga aagcagctag ggatagacag
       61 aaaatgtacg atgatccgcg tagacaccct gtatctttta atgtaggtaa tcatgtgtat
      121 ttaaaggtgt cgctgaggaa cggggttatc agattcagta aacgtggtaa gttatatatt
      181 gggccatttc cgattagggt gatcttaaat gatcagacgg ttgtacttga acttcctccc
      241 gagtttgctg gtatttacaa tgtgtttaac gtgtgttatc ttagaaagtg taaggtggac
      301 gttgaagcac aatttttacc aattaaggat cttaaagttg atttaagtaa caagctggtt
      361 gaggaaccga ttcgagtagt cgacagaaag gttactaatt taagaaagaa agagatcctg
      421 atggttttag tagaatggaa acacatctta ggttctaaat tgacgtggga gacagaagag
      481 ttgatgaaga cccattaccc tcatctattt gaccaagacc agattccgag gacggaatct
      541 ctttaa
//
LOCUS       XM_071832036            1065 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841843), mRNA.
ACCESSION   XM_071832036
VERSION     XM_071832036.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1065
                     /gene="LOC139841843"
                     /note="uncharacterized LOC139841843; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841843"
     CDS             1..1065
                     /gene="LOC139841843"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688137.1"
                     /db_xref="GeneID:139841843"
                     /translation="MRAMGFGCKCLKWIEACFRSASISVLINGSPTKEFNLQRGIRQG
                     DPLFPYLFIITSEGLNILANIAVRDKIIRGVEIGRDKCTVWKNIIKVGAELSKIGVNF
                     DSLFEKQIGDGHDVLFWSDLWASDTPLRLLCPRLYRLENHQAALVFDRVRVSSNGWSF
                     IWDWSREISGRLHGELDTLMSTIKTRVILGSGRSTRKFKGVKSGLYTTKSMVSLIDEK
                     LIPREASPMVTLRNNLIPQKVGIFMWRIQRKRIAVKEELDRRGIDLDSLLCPLCNDVV
                     ESVDHAIYSCKLAQEIWVGIHKWWDLPLPSGSNLEDLIKGGLSIGLNTSQRKSWQAIV
                     WVTCYYIWKNRNQKIFRNEA"
     misc_feature    <118..>213
                     /gene="LOC139841843"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    130..132
                     /gene="LOC139841843"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    616..876
                     /gene="LOC139841843"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagggcca tgggtttcgg gtgcaaatgt ttaaaatgga tcgaggcatg tttccgttct
       61 gcttccatct cggtcctcat caatggctca ccgacaaagg agttcaactt acaaaggggg
      121 attcgacaag gtgaccctct cttcccatat ctttttatta ttactagtga gggcttgaac
      181 attttggcta acatagcggt tagggacaag atcattagag gcgttgagat tggtagagat
      241 aagtgtacgg tatggaagaa catcatcaaa gtaggcgccg agttatccaa gattggagta
      301 aattttgaca gcttattcga gaagcaaatt ggcgatgggc atgatgtatt attttggtca
      361 gatttatggg catccgacac acctcttcgg ctgttatgtc cgaggttata caggctcgag
      421 aatcatcagg ctgctttggt tttcgatcga gttagagttt caagcaacgg gtggtcattt
      481 atatgggatt ggtctcgaga aatttcaggt agactacacg gggagttaga cacactcatg
      541 agcacaataa agacacgtgt tatcttaggt tcgggtcgta gcactcggaa gttcaagggg
      601 gtcaaaagtg gcttgtacac tacaaagtcg atggtttcct taattgatga aaaactaatt
      661 ccaagggaag catctccgat ggttacgctt aggaataatc ttatcccaca aaaggtagga
      721 attttcatgt ggagaattca acgtaaacga attgcggtca aagaagagct cgatagaagg
      781 ggcatcgact tagactcgtt gttgtgccct ctatgcaatg acgtggtcga gtcggttgat
      841 cacgccattt attcttgcaa acttgcacaa gaaatttggg ttggcattca taaatggtgg
      901 gatctccccc tcccttcggg ttctaacctc gaagacttaa tcaaaggagg actttcgatt
      961 gggttaaaca catctcaaag gaaatcatgg caagcaattg tatgggtgac gtgttactac
     1021 atttggaaaa accgtaatca aaagattttt cgaaatgaag catga
//
LOCUS       XM_071832037             726 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-responsive
            transcription factor ERF062-like (LOC139841844), mRNA.
ACCESSION   XM_071832037
VERSION     XM_071832037.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..726
                     /gene="LOC139841844"
                     /note="ethylene-responsive transcription factor
                     ERF062-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139841844"
     CDS             1..726
                     /gene="LOC139841844"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     ERF062-like"
                     /protein_id="XP_071688138.1"
                     /db_xref="GeneID:139841844"
                     /translation="MSSVNYHKIVESSTWATGFVDGATTSSVPINILDQPISQDSIFN
                     EKTEPGTDSAKVDQGLTSHGSNGLCDSLVENFKNRPTKRMGTTLGGAPKKQFRGVRQR
                     HWGKWVAEIRLPRNRMRVWLGTFKTAEEAAFAYDTAAYILRGDLAQLNFPNLKNQLKL
                     NSINGNTAALLQAKLQGVPKVANGLPISKLAEVDLCEKTGNMVDKSKKAIDSIDVVEG
                     VQLSKMPSLDMDIIWDSIFVSDS"
     misc_feature    283..471
                     /gene="LOC139841844"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(289..294,298..300,304..306,310..312,316..318,
                     328..330,334..336,355..357,361..363,370..372)
                     /gene="LOC139841844"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
ORIGIN      
        1 atgtcttctg ttaattatca caaaatcgtt gagtcgagca cttgggccac cggttttgtc
       61 gatggtgcaa ctacatcttc tgttcctata aacattcttg atcaacccat ctcacaagat
      121 tcaatattta atgaaaaaac tgaacctgga accgattcgg ctaaggtaga tcaaggccta
      181 acgagccatg gttcgaatgg tttatgtgac tcattggtcg aaaacttcaa gaataggcca
      241 accaagcgta tggggaccac gttgggtggt gcaccaaaga agcagtttag aggggtaagg
      301 caaaggcatt ggggaaaatg ggtggccgaa attcgattgc caagaaaccg aatgagggtt
      361 tggcttggaa cgtttaaaac agccgaagaa gctgcatttg cgtatgatac ggctgcttat
      421 atattaaggg gtgatttagc acaattaaat tttccaaatt tgaaaaatca gttaaagttg
      481 aattcgatta atggtaacac agctgctttg ctacaagcca agttacaagg ggtaccaaag
      541 gttgctaacg gtctaccaat atcgaagttg gctgaggtgg atttatgtga aaaaacagga
      601 aacatggtcg ataaaagcaa aaaagcgatt gattcgatag atgttgttga aggggttcag
      661 ctcagcaaga tgccttcttt agatatggac ataatttggg attctatttt tgtttctgat
      721 tcatga
//
LOCUS       XM_071832038             510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides non-specific lipid transfer
            protein GPI-anchored 5-like (LOC139841845), mRNA.
ACCESSION   XM_071832038
VERSION     XM_071832038.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..510
                     /gene="LOC139841845"
                     /note="non-specific lipid transfer protein GPI-anchored
                     5-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139841845"
     CDS             1..510
                     /gene="LOC139841845"
                     /codon_start=1
                     /product="non-specific lipid transfer protein GPI-anchored
                     5-like"
                     /protein_id="XP_071688139.1"
                     /db_xref="GeneID:139841845"
                     /translation="MAQHQKTNVVLMILVITLSALYGSSMAQSSGCTNELISMSSCLN
                     YISGNTSTPSSGCCSSLANVVQSQPQCLCQVLNGGGSSLGITINETQALALPKACNVQ
                     TPPTSKCNVAAPTDSPSGTTPSSTSGSPSETKTVPSTDNGSSDAASIRFANIYAALSL
                     LVAIYAMVL"
     misc_feature    115..303
                     /gene="LOC139841845"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; Region: AAI_LTSS;
                     cd00010"
                     /db_xref="CDD:237980"
ORIGIN      
        1 atggcacaac atcaaaaaac caacgtagtg ttaatgatcc tggtgatcac attgtccgcc
       61 ttatatggaa gctcgatggc tcaatcgtca gggtgtacaa atgagctaat tagtatgtcg
      121 tcatgcctaa attacatttc gggtaataca tctacacctt catcaggatg ttgcagctca
      181 ctagctaatg tggtccagtc acagccacaa tgtttatgtc aagtcttgaa tggtggtggc
      241 tcgtctttgg gtattactat taacgaaact caggcacttg cgttgcctaa ggcttgcaat
      301 gtccagaccc caccgactag taaatgcaat gttgctgctc caaccgactc tccgtcagga
      361 acaacacctt cttcaacttc aggaagccct tcggaaacaa aaactgtgcc atcaacagat
      421 aacggttcgt cagatgcagc ttcaataaga ttcgcaaaca tttatgcagc actttcgcta
      481 ttagttgcca tatatgctat ggtgttatag
//
LOCUS       XM_071832039             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841846), mRNA.
ACCESSION   XM_071832039
VERSION     XM_071832039.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139841846"
                     /note="uncharacterized LOC139841846; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841846"
     CDS             1..837
                     /gene="LOC139841846"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688140.1"
                     /db_xref="GeneID:139841846"
                     /translation="MVDAEKVGQQRKYNEYQDWELIPISFPPVMSIDTVNEPVIITCR
                     IPDRGIQIKRMHVDTGSGVNIMYEHCYRFLPAEVKVQLRQPDITLSGFSGESSWPLGR
                     IELVVEFADDKNPQLARSELIDFYVVRSTSHYKARLERNLIQRFNIIPSMVHGLIKFP
                     TMGEIATIASHQTTELCGSVVPVDIPSIGEQLKSSVFIANLLHPDKRIKIGACLSTET
                     KAKLHGILLANADVFAWQESDMTGVPRAIAEHKLNVNPSLTPVRQKKRHMALERSDWL
                     CA"
     misc_feature    169..399
                     /gene="LOC139841846"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(172..174,178..180,184..186,265..273)
                     /gene="LOC139841846"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    172..180
                     /gene="LOC139841846"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    172..174
                     /gene="LOC139841846"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(265..276,286..297)
                     /gene="LOC139841846"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atggttgacg cagagaaagt tggtcagcaa agaaaataca atgaatacca ggattgggaa
       61 cttatcccaa tttcattccc tcctgtcatg tcaatcgaca cagttaatga gcctgttatc
      121 atcacgtgtc gcattcctga tcgcggaata caaattaaac gcatgcatgt tgataccgga
      181 agcggtgtca acattatgta cgagcactgc tatcgttttc ttcccgcaga agtcaaggtg
      241 cagttgcgcc aacccgatat tacgctatca ggattctctg gggaaagctc atggccgcta
      301 ggccggatag aacttgtagt agagtttgcg gatgacaaga atccgcagtt ggctagaagc
      361 gagttaatcg acttctatgt ggttcgttcg acttcacatt acaaagcgcg tctggagaga
      421 aatttaatac aacgttttaa cattataccc tcaatggtgc acggcttgat taagtttcct
      481 accatgggag aaattgccac aattgcatcg catcaaacaa ccgagttatg tggttcagtt
      541 gtgcctgtag acattcccag cataggagag caacttaaaa gcagcgtatt catagctaat
      601 ctcttgcatc cggacaagcg aatcaaaatt ggcgcatgct tgtcaaccga aactaaagct
      661 aagttgcacg gtatcttgtt agctaacgca gatgtcttcg catggcaaga atcagatatg
      721 actggggttc cgcgggctat tgcggaacat aaattgaatg ttaacccatc actcacgcct
      781 gttaggcaaa agaaacggca catggccctt gaacgcagtg attggttatg cgcataa
//
LOCUS       XM_071832040             513 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TPD1 protein homolog 1-like
            (LOC139841848), mRNA.
ACCESSION   XM_071832040
VERSION     XM_071832040.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..513
                     /gene="LOC139841848"
                     /note="TPD1 protein homolog 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841848"
     CDS             1..513
                     /gene="LOC139841848"
                     /codon_start=1
                     /product="TPD1 protein homolog 1-like"
                     /protein_id="XP_071688141.1"
                     /db_xref="GeneID:139841848"
                     /translation="MSLVHVIFFYIMVFIIFLSQFQIISSSYSRNKYEKSFNGRDNYN
                     KTTTNSEPETEEAFQAHRKLLFQGTSCSARDLSISQSKGSTSGIPQYIVQIVNTCVTQ
                     SVCAPSNIHLHCGWFASTRIVNPRFFKRLSYDDCLVNSGQTLKTGQMISFSYSNSFMY
                     PISLKHARFC"
ORIGIN      
        1 atgagtttgg tccatgtcat cttcttctac atcatggtgt tcatcatttt tctttctcaa
       61 tttcagatta tttcaagttc atattcaaga aacaagtatg agaaaagttt caatgggaga
      121 gataattaca acaaaactac aacaaattca gaaccggaaa cagaagaggc atttcaggct
      181 catagaaaac ttttgtttca aggcacttct tgttcagcca gagacttgag catttcacaa
      241 agcaaagggt caacaagtgg gataccacaa tatatagtcc aaatagtgaa cacatgtgta
      301 acacaatcag tgtgtgcacc ttcaaatatc catcttcatt gtggttggtt tgcatcaaca
      361 agaatagtca acccaagatt cttcaagaga ctttcttatg atgattgttt ggtcaatagt
      421 ggtcaaactt tgaaaactgg tcaaatgatc agcttttctt attcaaattc tttcatgtat
      481 ccaatctcat taaaacatgc cagattctgc taa
//
LOCUS       XM_071832041            1752 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841849), mRNA.
ACCESSION   XM_071832041
VERSION     XM_071832041.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 33% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1752
                     /gene="LOC139841849"
                     /note="uncharacterized LOC139841849; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841849"
     CDS             1..1752
                     /gene="LOC139841849"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688142.1"
                     /db_xref="GeneID:139841849"
                     /translation="MSQEQVTLASLRLDHKLRKVNLASLSLAHLLRKGYVEGKLTMKN
                     MLTVIPQVKKMLTERQEKLFRSTCFGPWLDLSYTGNDPGLVHAMLQQKCERSEKLDAS
                     KYPEEQQDIWFHFSPNFMIRFGRREFCLVTGFMFGSRTDMAHYIPRNYESKTAPIRRR
                     CFPERPDASNILVSDIQNILIKKQGDVKVPKVSDDDIVRLAIILIVERAFMGKQGQHV
                     VSKQFLWLVEDFNKVNVYPWGSRIWDATYSAVSEGFEVRESQLESGGGKAYTLAGFMW
                     AFKIWILEAYRRTIKSFATKTDKDGVPRALFWKRSSAETFTVSDYLKLLHIMDDCPKR
                     KRPFRSLHPSETERGCQWWIQSSSYFQGDVVEDEKNTQDDNQVEEELGGSLKELLQEE
                     SEQTSDPHPTQKGNKLQELLRMVNMLTKRVDDQEKELADCKKKLDDHEKRLKEQEHQE
                     HQYVDNEDAYVDPRSFSDNDTSPRVVRRGKRERRPTHFLNSPFTTPGYRKPLEKLSDE
                     VASRVKRLKVSHQGTKEAENVLPMETEKPTEKGAEKAVDKQDENVALVSEEIEQGVDL
                     PLVNEAEKQADQHDVSE"
     misc_feature    331..738
                     /gene="LOC139841849"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 atgtctcaag aacaggtaac ccttgcgtcc ttgcgtcttg atcataagtt acgcaaggtt
       61 aaccttgcat ccttgagtct tgcacatctg ttacgcaagg gctatgtgga aggtaaattg
      121 accatgaaga atatgttgac cgtgattcct caggtcaaga aaatgttgac tgagagacaa
      181 gaaaaattat ttagaagtac atgctttggt ccctggttag atctttcata cacgggtaat
      241 gatcctggcc tagtacatgc catgctccaa cagaaatgtg agcgttcaga aaaattagat
      301 gctagtaagt accctgaaga gcaacaagat atatggtttc atttttctcc taattttatg
      361 attagatttg gtcggcgtga attttgttta gtcaccggct ttatgtttgg tagccggacg
      421 gacatggcac attacatccc tcgaaattat gaatctaaga ccgcacccat tagacgacgt
      481 tgttttccag aacgtcccga tgccagcaac attttggtta gtgatataca aaacatcctt
      541 atcaaaaaac aaggtgatgt aaaggttccc aaggttagtg acgatgatat tgttcgacta
      601 gctataattt tgatcgtaga gagagcgttt atggggaagc aggggcaaca tgtggttagt
      661 aaacagtttc tatggttggt tgaagatttc aataaggtga acgtgtaccc atgggggtct
      721 cgtatttggg atgctactta ctcagcggtg agcgaaggtt ttgaggttcg agaaagccaa
      781 ttagagagtg ggggtggaaa ggcttacaca ttggctggtt ttatgtgggc atttaagatt
      841 tggatcctcg aggcataccg tcgtaccatt aagagttttg caaccaaaac tgataaggat
      901 ggagtaccaa gagcattatt ttggaagcgt tcatctgctg aaacctttac agtgtctgac
      961 tacctaaaac ttctacatat aatggatgat tgtccgaaga gaaaaagacc ttttcgttcc
     1021 ctgcacccat ctgagacaga gagaggttgt caatggtgga tccagagttc ctcttacttt
     1081 caaggagatg ttgttgaaga cgagaaaaat acacaagatg ataatcaagt tgaagaggag
     1141 ttgggtggca gtttgaagga attattgcag gaggagtcag agcagacctc ggaccctcat
     1201 ccaacacaaa aaggcaacaa attgcaggaa ttgttgcgta tggttaatat gttgactaag
     1261 agggtggatg atcaagaaaa ggagttggct gattgtaaaa agaagcttga tgatcatgaa
     1321 aaacgtttga aagaacagga acaccaggaa catcagtatg ttgataacga ggatgcatat
     1381 gtggatcctc gatctttctc tgacaatgat acatctccga gggttgttag acgtgggaaa
     1441 agagaaagaa ggcccactca ttttttaaat tcccctttca caacaccggg ctatagaaaa
     1501 ccattggaga agttgtctga cgaagtagct tctagagtaa aaaggctgaa agtttctcat
     1561 caagggacta aagaagctga gaatgtgttg ccaatggaaa ctgaaaagcc tactgaaaaa
     1621 ggggctgaaa aagctgttga taaacaagat gagaatgtag ctctggtgtc tgaggagatt
     1681 gagcaaggag ttgatttgcc attggttaat gaagcagaaa aacaagcaga ccagcatgat
     1741 gttagtgaat ga
//
LOCUS       XM_071832042             732 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841850), mRNA.
ACCESSION   XM_071832042
VERSION     XM_071832042.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..732
                     /gene="LOC139841850"
                     /note="uncharacterized LOC139841850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841850"
     CDS             1..732
                     /gene="LOC139841850"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688143.1"
                     /db_xref="GeneID:139841850"
                     /translation="MKTYLKSQGLWKVVETDEDPPALRANPTVAQLRNYEEELLKKDK
                     ALTCLHSGLADQIFISIMDLETPKAVWDKIQDTYESSDRVKAVRLLTLRREFELLKMN
                     DDELIKDYSSRIMDVVNQIRLHGDKISDQKIVEKIMISVPQKFEAKISAIEESCDVSM
                     LTISELTSKLQAQEQRASMRSEEKVEGAFQASFKNNKAENSRQNTYKKGNYKGTFPPC
                     KVCQNKNHQEVDFWLKDKPDFKCNL"
     misc_feature    130..528
                     /gene="LOC139841850"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgaagacat atttgaaatc tcaaggttta tggaaggttg tagagactga tgaagatcct
       61 ccagcactca gagcaaaccc aactgttgct caactaagaa attatgaaga agagttgctg
      121 aagaaagaca aggcacttac ctgtttacat tcaggacttg ctgatcaaat tttcatctcg
      181 ataatggact tggagacacc aaaagctgtg tgggataaaa tccaagatac ctatgaaagt
      241 tctgatagag taaaagctgt cagattattg actctcagaa gagagtttga attgttgaag
      301 atgaatgatg atgaactcat aaaagattat tcatcacgaa taatggatgt tgtaaatcag
      361 attagacttc atggtgataa aatttcagac cagaaaatag tggagaaaat aatgataagt
      421 gttcctcaaa agtttgaagc caaaatttct gcaatagaag aatcttgtga tgttagtatg
      481 cttacgattt ctgaactaac cagtaagctt caagcacagg aacagagggc ctctatgaga
      541 tctgaagaaa aggttgaagg tgcttttcaa gcatctttca aaaataacaa ggctgagaat
      601 tcaagacaaa acacgtacaa gaaaggaaat tacaaaggta cattccctcc gtgtaaagtt
      661 tgtcaaaata aaaatcatca agaagttgat ttttggctca aagataaacc agactttaag
      721 tgcaatttgt ga
//
LOCUS       XM_071832044            1653 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841851), mRNA.
ACCESSION   XM_071832044
VERSION     XM_071832044.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1653
                     /gene="LOC139841851"
                     /note="uncharacterized LOC139841851; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841851"
     CDS             1..1653
                     /gene="LOC139841851"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688145.1"
                     /db_xref="GeneID:139841851"
                     /translation="MSATSQKLCEWITGCILPSNIVIPVTLGQYNGTTDPDDFLQIFE
                     GVMKTQHWSDEVACHLFPTVLQSAAREWFAKLPPNGITCFADLREKFLIQYQNLRQHT
                     YTHLYAHEIPMYPGEKIESFITRYMMECQKIPGLPKTQHIFGFITCLDKDTHPSLVSE
                     LRWNIPSTFADVVTVARQYQHLGRERQAGITGMKKKEKRKGEATAGTVMTAVDAVKAI
                     TRATTATAKAMTTIEKRNGQKSDKYCEFHEDNDHETNECKALIREIIAKIKAGELNHL
                     LSGRKFKKPDPYKTFSWQKEDGKKHEKAKDKAVINMINIEKDEFALQSSWKDVTVTFP
                     GLPARHSRDELVVITGLIDGFPVSEMYTDTGSKVEVLYAHCLSKLPKSVGRRMRQSNA
                     VISGFMGFAEEPIGRIKAAITFGAIASTTHGILKLPTRRGVATVQSTRHPFPRNECTR
                     DRQCAESWKTSHAMEEKCISVLKRLSFFSPSAHFNCTNPVIISKAEKAVAGWRRRPGC
                     EKPFNGVNKKAEPFNPTPKHSRTESCESSNRDKTTVEGNKSG"
ORIGIN      
        1 atgtcggcta ctagccaaaa gctatgcgaa tggattaccg gttgtatact cccttccaac
       61 atcgtcatac cggttacttt ggggcaatac aatggcacta ccgacccgga cgatttcctg
      121 caaatctttg agggcgtcat gaaaacccaa cattggagtg atgaagtagc gtgtcatctc
      181 tttccgactg tcctacagtc ggctgctagg gaatggttcg ccaaattacc accaaatggg
      241 atcacatgct tcgcagactt gcgggaaaag tttctcattc aatatcagaa cctccgccaa
      301 cacacgtata cacacctata cgctcacgaa ataccaatgt acccgggaga gaaaattgaa
      361 agcttcatca caaggtatat gatggagtgt caaaaaatac caggactccc aaaaacacag
      421 cacatcttcg gattcataac atgcctggac aaagatacac acccatcgct tgtctctgaa
      481 ctccggtgga acatcccgag tacatttgca gacgtcgtga cggtagcaag acaataccaa
      541 cacttgggca gggaaagaca ggctggtatt accgggatga aaaaaaaaga gaagaggaaa
      601 ggagaagcga cagcaggcac cgtcatgaca gcagtagatg cagtgaaagc aatcacaaga
      661 gccacaacag ccacggcaaa agccatgaca accatagaaa agcggaatgg tcaaaagtca
      721 gataaatact gtgaattcca cgaagacaac gatcatgaaa ctaatgaatg caaagcgcta
      781 atacgtgaaa tcatcgccaa aatcaaggca ggagaactta atcacttgtt gtcaggtagg
      841 aagttcaaaa aacctgaccc ctacaaaaca ttcagttggc aaaaggaaga cggcaagaag
      901 catgagaagg caaaagataa agctgttatt aatatgatca acattgagaa ggacgagttt
      961 gctttgcaaa gctcctggaa agatgttacc gtcacattcc cgggattacc ggcgcgacac
     1021 tctagggatg aattggtagt gattaccggc ttgatagatg ggttcccggt cagcgagatg
     1081 tacaccgaca cgggaagcaa agttgaagtc ctatatgccc attgcctttc aaagctacca
     1141 aagagtgtcg gaaggaggat gagacaatct aacgctgtca tctctgggtt catgggtttc
     1201 gctgaagaac ccataggaag gatcaaggca gcgatcacgt tcggtgcaat agcctctaca
     1261 acacacggta tactcaaact cccaacccgg cgaggcgtgg caacggttca atccacccga
     1321 caccctttcc ccaggaatga gtgcactcga gataggcaat gtgccgaatc atggaagaca
     1381 tcacacgcca tggaggaaaa atgtatatcc gtccttaaaa ggctatcttt tttctcccca
     1441 tcagcacact tcaattgtac aaatccagtc atcatcagta aggcggagaa ggcagttgcc
     1501 ggctggcgtc gtcggccagg atgtgagaaa ccatttaatg gtgtgaacaa aaaggccgaa
     1561 cctttcaatc cgacacccaa acattccagg actgaaagct gtgagagctc caatcgagac
     1621 aagacaacgg ttgaaggaaa caaaagtggc taa
//
LOCUS       XM_071832045             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841852), mRNA.
ACCESSION   XM_071832045
VERSION     XM_071832045.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139841852"
                     /note="uncharacterized LOC139841852; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841852"
     CDS             1..498
                     /gene="LOC139841852"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688146.1"
                     /db_xref="GeneID:139841852"
                     /translation="MKCSGWVDELPKVLWTQRTTHKNNTRETPFSLVYGSKAVIPVEI
                     NVPTVRILSYIEGENEERLRTNLNYEEEHREMAAIRKATNKRCIAKYYDKRVRAKTYM
                     VGDLVWCDNQASRAQNTGKLGPNWEGPYRVIGISNTGTYKLAELKGNLIKRTWYATAL
                     KKCYM"
ORIGIN      
        1 atgaagtgca gcggatgggt ggatgagcta cccaaagtcc tatggacaca aagaacgacg
       61 cacaagaata acacaagaga aacaccgttc agtttggtat acggttcaaa ggcggtaatc
      121 ccggtggaaa taaatgtccc aacagtaaga attctgtcat acattgaggg tgaaaatgag
      181 gaaaggttgc gtaccaattt gaattacgag gaggagcaca gggaaatggc cgcaatccgc
      241 aaagccacca acaaacggtg cattgcaaaa tactacgaca aacgcgtacg ggcaaagaca
      301 tacatggtag gagatcttgt gtggtgcgac aaccaagcaa gcagggccca aaatactggg
      361 aagttggggc caaactggga gggaccttat agggtcattg gaatcagtaa cactggaact
      421 tacaaactgg cagagcttaa gggaaatcta atcaagcgga cctggtatgc taccgcgctt
      481 aaaaaatgtt acatgtaa
//
LOCUS       XM_071832046             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein PTST homolog 2,
            chloroplastic-like (LOC139841853), mRNA.
ACCESSION   XM_071832046
VERSION     XM_071832046.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139841853"
                     /note="protein PTST homolog 2, chloroplastic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139841853"
     CDS             112..660
                     /gene="LOC139841853"
                     /codon_start=1
                     /product="protein PTST homolog 2, chloroplastic-like"
                     /protein_id="XP_071688147.1"
                     /db_xref="GeneID:139841853"
                     /translation="MRQNGHDTYASSSKVNGIDQDYVSADVGDSNYVRFRLQQMQLEL
                     SSSLCLLRSKSESTNPDGQQSSSSELQKLSDTYEFQENEIMNAKNRLRSIRAQLVLER
                     KKSLSIIEAHKVIEAKQKIIDSGCRTLQVLITTCIIWPNSASDVRLAGSFDGWTTQKK
                     MERSQTGVFFLSLKLYPGSNNV"
     misc_feature    511..>645
                     /gene="LOC139841853"
                     /note="N-terminal Early set domain, a glycogen binding
                     domain, associated with the catalytic domain of
                     AMP-activated protein kinase beta subunit; Region:
                     E_set_AMPKbeta_like_N; cd02859"
                     /db_xref="CDD:199889"
ORIGIN      
        1 tttttttttt ttttttttta aatcagagaa aatgtagttg aggaagatgc gggaatagaa
       61 ggtatacttc atcgattgga aagatataga agctcgtctt ttggtattag tatgcgacaa
      121 aacggacacg atacatatgc ttcttcgagc aaggtcaatg gcattgacca agattacgtc
      181 tctgctgatg tgggtgattc aaactatgta agatttcgac ttcaacaaat gcaactcgag
      241 ctttcttcat ccctttgctt gttacggtcc aaaagtgaaa gcacgaatcc agatggtcaa
      301 caaagttcgt ctagcgagct gcaaaagcta tctgatacgt atgagtttca agaaaatgag
      361 attatgaatg ctaaaaatag gttgagatca atacgtgctc agctggttct agaaaggaag
      421 aagtcgttat cgattatcga agctcacaaa gtaattgagg cgaaacaaaa gataattgat
      481 agcggatgta gaactttaca ggttcttatt acgacctgta taatttggcc taattcggct
      541 tcagatgtac gcttagcagg atcatttgat ggttggacca ctcagaagaa gatggaaaga
      601 tcacaaacgg gtgttttctt tttgtcgttg aagttgtatc caggaagcaa caacgtctaa
//
LOCUS       XM_071832047             777 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841854), mRNA.
ACCESSION   XM_071832047
VERSION     XM_071832047.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..777
                     /gene="LOC139841854"
                     /note="uncharacterized LOC139841854; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841854"
     CDS             1..777
                     /gene="LOC139841854"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688148.1"
                     /db_xref="GeneID:139841854"
                     /translation="MEKLIYALVHTARRLRRYFQAHPIQVLTDQPIKHVLTRPEIFGR
                     MAKWAIELGEHEISFIPRHSVKGQVIADFLVELPFDMIKQGETPVTRRDMDEFWELYT
                     DGASSEEGAGIGLLLISPNGEEITYAIRLKFAASNNEAEYEALLAGLRLEKSIDVQQL
                     TAYVDSQLLASQLNGSFEARDTSMQKYLELTKTLVKNFVAFEIKQIPRNRNKKADALS
                     KLASLLYDQFTKKVMVEVLERKSTDEDTLMATTQQKKTAG"
     misc_feature    <4..222
                     /gene="LOC139841854"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    292..666
                     /gene="LOC139841854"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(307..318,406..414,421..423,493..495,613..615,
                     655..657)
                     /gene="LOC139841854"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggaaaagt taatctatgc cttagtgcac acggcaaggc ggctacgacg atattttcaa
       61 gcacatccga tacaagtcct cacggaccaa ccgatcaaac acgtcctgac aagaccggag
      121 atttttggaa ggatggcgaa atgggcaata gaacttggcg agcatgaaat cagctttatc
      181 ccaagacatt cagtcaaggg ccaagttata gccgacttcc tggtagaact cccttttgat
      241 atgatcaaac aaggtgaaac tcccgtcaca agaagggaca tggacgaatt ctgggaacta
      301 tatacagacg gtgcatccag cgaggaggga gccggcatag gtctactcct catatccccg
      361 aacggagaag aaataaccta cgctatccgg ctaaagttcg ccgcctcaaa caatgaggcc
      421 gaatatgaag ctctgctagc cggattacgc ttggaaaaga gcatcgacgt acaacagctc
      481 accgcttacg ttgactcgca actactagca agtcagctaa acggtagttt cgaagcaaga
      541 gacacatcga tgcaaaaata cctagagctt acaaagacgc tagtcaaaaa cttcgtggca
      601 tttgaaatca agcaaatacc ccgtaaccgt aacaagaaag cagatgcttt aagcaagctt
      661 gcctccttgc tttatgatca attcactaaa aaagtcatgg tggaggttct ggaaagaaag
      721 tcaaccgacg aggataccct catggcaaca acacagcaaa agaagactgc tggatga
//
LOCUS       XM_071832048             717 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841855), mRNA.
ACCESSION   XM_071832048
VERSION     XM_071832048.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..717
                     /gene="LOC139841855"
                     /note="uncharacterized LOC139841855; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841855"
     CDS             1..717
                     /gene="LOC139841855"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688149.1"
                     /db_xref="GeneID:139841855"
                     /translation="MFPAIAQEPSDAPIIIKGRVKSCGYITKRLHIDIGCGVDILYEH
                     FFRLLPGAVRAKLVAPSTALSGFSGESAWPIGIIELEVELVDDDDKELLRSTTVEFAV
                     VRSYSKYNALLERTTLQKLAAIPSTVHGLIKFPTPLGIAMIRSEKQDASVAVVEQAEK
                     QPSEVEQLRSCMIISNPRNPEQKIKIGGGLSDETKFKLRNILASNTDVFVWKEADMTG
                     VPREIAEHKLNANPSLTPVR"
ORIGIN      
        1 atgttcccgg ccatagcaca ggaaccctcg gatgcgccca tcataattaa aggacgagtt
       61 aaaagctgcg ggtacatcac caagcgactg catatagaca tcggttgcgg tgttgatata
      121 ttgtacgaac atttttttcg tttgctgcca ggggctgtgc gagccaagct agtggcccct
      181 agcaccgcat tatcaggatt ttctggggag tccgcatggc caatcgggat tattgaatta
      241 gaagtggagc tagtagatga tgatgataag gagttactaa ggagtacaac agtagaattt
      301 gctgtcgtaa ggtcttactc aaaatataat gcgcttttag aacgcacaac tttgcaaaaa
      361 ttggcagcta tcccttccac agtgcatggc cttatcaagt tcccaacacc attaggaatt
      421 gcaatgataa ggtcagaaaa acaagatgca agcgtcgcgg ttgtagaaca agcagaaaaa
      481 caaccaagtg aggtagagca acttcgaagc tgcatgatca tctcaaatcc gcgaaatcca
      541 gaacaaaaaa ttaaaatcgg cggaggattg tccgatgaga caaaatttaa gcttcgtaac
      601 atattagctt ctaatacgga tgtctttgta tggaaagaag cggacatgac gggcgtgcca
      661 agagaaattg ctgagcataa actcaatgca aatccaagtt tgacgccagt tcgataa
//
LOCUS       XM_071832049            1005 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841856), mRNA.
ACCESSION   XM_071832049
VERSION     XM_071832049.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1005
                     /gene="LOC139841856"
                     /note="uncharacterized LOC139841856; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841856"
     CDS             1..1005
                     /gene="LOC139841856"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688150.1"
                     /db_xref="GeneID:139841856"
                     /translation="MEDTRQEAENVILAIDSHQPYKKRERGRIIREWSEVSFPALDTI
                     CPSDLPVTINGRIFSREVRRIYLNSGSACDVMYGHFFDRLSPFIRARLGASRIPLVGF
                     SEESCWPIGEIDLDFTIGEPPLTRTETIDFVVVRANSPHNILLGRVAMKKMGIIVSTV
                     HQIVKFHTHEGIGTLASTYDRDKVILAIKETMKEPTECILEASKEDPQVEKISVNSMF
                     PYQEISIGKNLPSSTKQKLRKLLQDNVDGSPFITEHRLNEHKHLEPVHQKKRNLALER
                     DEAACKEVEGLLKAGIIREAKYPSWVANPVMVKKSDGGWRMCVDFTNINKACPKDCYP
                     "
     misc_feature    871..>1002
                     /gene="LOC139841856"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggaagata cgaggcaaga agcagaaaat gtaatcctgg caatagattc acaccaacct
       61 tataagaaaa gagaaagagg tcgtatcatc agagaatgga gtgaagtatc atttccagcc
      121 cttgatacta tatgtccttc ggacctaccg gtcaccataa atggaagaat ttttagcaga
      181 gaagtccgaa ggatatatct caatagtgga agtgcttgtg acgtaatgta cgggcatttc
      241 tttgatcgac taagtccctt tatcagagca cgattgggtg cctcaaggat accattagta
      301 ggattctccg aagaaagttg ttggcccatt ggagaaattg atctcgactt cacgataggc
      361 gaaccaccat taacaaggac cgaaaccatt gatttcgtgg tagtccgagc aaactcccca
      421 cacaacattt tgctcgggag ggtagctatg aaaaagatgg gtataattgt atccacagta
      481 catcaaatag tcaagttcca tacccacgaa ggtatcggaa cccttgcttc aacatatgac
      541 agggataagg tgatcttagc cataaaagaa acaatgaaag agccaaccga gtgcatccta
      601 gaagcttcga aggaagatcc ccaagtagaa aagatatcag taaattcgat gtttccatat
      661 caagagatca gcataggtaa gaacttacca tcatccacca agcaaaagct tcggaagcta
      721 ttgcaagaca atgtggatgg gtcacccttt ataacggaac atcgactcaa tgagcacaag
      781 cacctcgaac cagtgcatca gaagaagaga aacttagcac ttgaaagaga tgaagcggca
      841 tgtaaggaag tagaaggtct gctaaaagca ggaataattc gcgaagctaa atatccttcg
      901 tgggtcgcta accctgtgat ggtaaagaaa tcagatggag ggtggagaat gtgcgtcgat
      961 ttcaccaaca tcaacaaggc ctgccccaaa gattgttatc cctga
//
LOCUS       XM_071832050             366 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841857), mRNA.
ACCESSION   XM_071832050
VERSION     XM_071832050.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..366
                     /gene="LOC139841857"
                     /note="uncharacterized LOC139841857; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841857"
     CDS             1..366
                     /gene="LOC139841857"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688151.1"
                     /db_xref="GeneID:139841857"
                     /translation="MQSLNGKLASLSRFVSKGAEKQLPFFRILKGCLGKKKIVWNEEA
                     EKAFVEMKEYIAKLPTLTSPEEGETLFIYLAASKECISTVLVTEREKVQVPIYFVSRV
                     LQGAELNYPELEKLTDDVA"
     misc_feature    118..>345
                     /gene="LOC139841857"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atgcagagtt tgaacgggaa attggcatca cttagcaggt tcgtatcaaa gggagcagaa
       61 aaacaactac ccttcttcag aatcttgaaa ggatgcttgg gaaaaaagaa aattgtctgg
      121 aacgaagagg ctgagaaggc attcgtcgaa atgaaggagt acattgccaa actccctacc
      181 ttgacttcac ccgaagaagg agaaacactt ttcatatact tggctgcttc gaaagagtgc
      241 attagcacag tcttggtcac tgaacgagaa aaagtgcaag taccgatata ctttgttagt
      301 cgagtacttc aaggagcaga gctgaattac ccagaacttg agaagcttac tgatgatgta
      361 gcgtga
//
LOCUS       XM_071832051             684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841858), mRNA.
ACCESSION   XM_071832051
VERSION     XM_071832051.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139841858"
                     /note="uncharacterized LOC139841858; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841858"
     CDS             1..684
                     /gene="LOC139841858"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688152.1"
                     /db_xref="GeneID:139841858"
                     /translation="MAKWAIELDEHDIEFRVRHVINGQVLADFIAKTDSVDEEDTKNS
                     TQVITPKIKSEEWKLYTDSVSSSDGSGAGLMLVKSEGKEFTYALHFEFEKTNNEVEYE
                     ALPAGLRMAKELKILHLRAFVDSQLVSNQIRGTFEAKQPTIQQYLSKAKELIESFKSF
                     DIEHVRRSQNKKADALSKLASLTFRHLAKEVLVEVLEKKSILEEEVNDLIQEDEVTWM
                     TPLQVYLET"
     misc_feature    214..543
                     /gene="LOC139841858"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggctaaat gggccattga gttagatgaa catgacatcg agtttcgagt caggcacgta
       61 atcaatggac aagttctggc agatttcatc gctaaaacag atagcgttga tgaagaagat
      121 acaaagaact ccactcaggt cattaccccg aagattaaaa gtgaagaatg gaagttgtac
      181 actgatagtg tgtcgagttc tgatggatca ggtgctggtc tgatgttagt aaaatccgaa
      241 ggaaaagagt tcacatatgc actccacttc gaattcgaaa aaactaataa cgaagttgag
      301 tacgaagcac tacccgcagg gctgagaatg gcgaaggaat taaaaatcct tcaccttcga
      361 gctttcgtcg actcacaact agtgtctaac caaatcaggg gcacttttga agcaaagcaa
      421 cccaccatcc aacagtactt gtcaaaagcg aaggaactaa tcgaaagctt caaaagtttt
      481 gacatcgaac atgtccgaag aagtcaaaat aagaaggcag acgcactaag caaacttgct
      541 tcgctaacat ttaggcatct tgcaaaagaa gtcctggtgg aggtgctaga aaagaaatcg
      601 atcctagaag aagaggtcaa tgacctcata caagaagacg aggtaacatg gatgacccca
      661 ctgcaagtat atcttgaaac atga
//
LOCUS       XM_071832052            2382 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841859), mRNA.
ACCESSION   XM_071832052
VERSION     XM_071832052.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2382
                     /gene="LOC139841859"
                     /note="uncharacterized LOC139841859; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841859"
     CDS             1..1950
                     /gene="LOC139841859"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688153.1"
                     /db_xref="GeneID:139841859"
                     /translation="MSVIETYEIGTLKNRRRRPLRSRTADTFFRILSLCSSLSSASLN
                     LCKEHDKDENHVGSIRKNDVSLFCIDIVPGDYLCQDEMSTNETRVVLDTQEEGFCNKN
                     AESSERDHKSSGERGTFSHKVETNSLCSSAIMNQDNNDMTNSSPYLSTDKCIEEGEIS
                     GQFMDIMLEDETKDVENSVSERANFIGIEPRVTNTDEDVYKGMKGSGNNRKRNLMNYS
                     EIAGHGRFRESANILKNSPTKNQDLVYALKDGDAQNNRKRQVRLIEKDTTNKKAKMSV
                     DRTPISESLRSLGEHLEDTSKVVVDATKNKDDCTEKKKKRTLTKERKAKKKRNERIKR
                     AEKNRKLGVKRLKLEPVIREKKVTYCRHYLKGRCHEGEKCKFSHDTVPLTKSKPCCHY
                     ARHACMKGDECPFDHQLSKYPCNNHFSKGFCSRGPDCMFSHEVQPTETFLNASNELKA
                     EQKPFTNSGSGSKTVDTNSCIPPTIVISNPERNFMDATTKLSFRPPKGITFLSRETLP
                     LESRPVSNVNADSKEITKMTPIIQDSKEITKTPPVVPRGINFLSFGKKAGLDQSNVVH
                     FIKMNNGCGKPRLSNLDLGSGSKCESLVDAVKVDIATDRPNSSLKPVPMLPFMSSASQ
                     KAVQSTLTFALKFESDVKTTDLIFG"
     misc_feature    880..>1137
                     /gene="LOC139841859"
                     /note="Uncharacterized conserved protein, contains
                     CCCH-type Zn-finger protein [General function prediction
                     only]; Region: COG5252"
                     /db_xref="CDD:227577"
     misc_feature    <1078..1488
                     /gene="LOC139841859"
                     /note="Cleavage and polyadenylation specificity factor
                     (CPSF) Clipper subunit and related makorin family
                     Zn-finger proteins [General function prediction only];
                     Region: YTH1; COG5084"
                     /db_xref="CDD:227416"
     polyA_site      2382
                     /gene="LOC139841859"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgtcggtga tcgaaacata tgaaatcgga accctaaaaa accgccggag acgacctctc
       61 cgtagccgga ctgctgatac gttttttcgt attctctccc tttgctcttc gctttcttca
      121 gcatcactta atctttgcaa agaacatgat aaagacgaaa atcacgtagg atccattaga
      181 aaaaatgacg tttccttgtt ttgcattgat atcgtacctg gggattatct atgtcaagat
      241 gaaatgtcta caaatgaaac ccgagtggtt ttggataccc aggaagaagg tttttgtaac
      301 aaaaatgcag aatcaagtga acgtgatcat aaatcatcag gagaaagggg aactttttcg
      361 cacaaagttg agactaactc tttatgctca tctgctataa tgaatcaaga taataatgat
      421 atgacaaatt cttcccctta cttatccaca gataaatgta ttgaggaagg ggaaatttcg
      481 ggacaattta tggatataat gcttgaagat gagacaaaag atgtggaaaa tagtgtttcc
      541 gagcgtgcaa actttatagg catcgaacca cgagttacaa acacagatga agatgtttat
      601 aaaggtatga agggatcagg aaataacaga aaaagaaatt taatgaatta ttctgaaata
      661 gctggtcatg gaagatttag agaatctgca aacattttaa aaaacagtcc aaccaagaat
      721 caagatcttg tatatgcgtt aaaggatggc gatgcacaaa ataatagaaa gaggcaggta
      781 cgtctcatcg aaaaagatac aacaaacaaa aaggccaaga tgtctgttga ccgaacaccc
      841 atttctgaaa gtctaagatc tcttggtgaa caccttgaag acacctctaa agtagttgtc
      901 gatgctacta aaaacaagga tgattgtacc gagaagaaaa agaagcgaac tttaaccaag
      961 gaaagaaaag caaagaaaaa gcggaatgaa agaattaaaa gagctgaaaa gaacagaaag
     1021 cttggtgtca aaaggctaaa acttgaaccg gtgataagag aaaagaaggt tacgtattgt
     1081 cgtcattatt taaaaggaag gtgtcatgag ggtgagaagt gcaagttttc tcatgatacg
     1141 gttcctttga caaaatctaa gccgtgctgt cattatgctc gtcacgcttg tatgaaaggc
     1201 gatgaatgcc cattcgacca tcaactctca aagtatccat gcaataacca tttttcaaaa
     1261 gggttttgca gccgaggtcc agattgtatg ttttctcatg aggtgcaacc gactgaaacc
     1321 ttcttaaatg cttcaaatga gttgaaggct gaacaaaagc cttttacaaa ttcaggatcg
     1381 ggttccaaaa cggtggacac aaattcatgt atcccaccca ctattgttat cagtaacccc
     1441 gaacggaatt ttatggacgc tacaacaaaa ttatcttttc ggcctccaaa aggaataaca
     1501 tttctttcta gagaaacgtt accactagaa tcccgcccgg tttctaatgt aaacgctgat
     1561 tccaaagaaa ttaccaaaat gacccctata attcaggatt ccaaagaaat tactaaaacg
     1621 ccccctgtag ttccgcgtgg aattaacttt ctatcgttcg gtaaaaaagc tggtttggac
     1681 cagtcaaacg ttgtacattt tattaagatg aacaacggat gtggaaagcc tcggttaagc
     1741 aacttggatt tgggttcggg ttcaaagtgt gagtcattgg tagatgcggt gaaagttgat
     1801 attgcaacag atagaccaaa ttcttcttta aagccggtac ctatgcttcc atttatgtca
     1861 agtgcatcac aaaaagcggt tcagtcaact ttgacttttg cattaaagtt tgagtcagat
     1921 gtaaagacaa cagatctgat atttggctga ggagatatga aaacttgaac cattaagaat
     1981 ttcggctatg ggcctaacag taactttcac caggaccagc tgaaagtggg acggaatata
     2041 acttcaatag cctcaaatgc acaaaaattg cttgtgtcga acaagcttta ttgggggaat
     2101 tgcgctctta caaatttgtg atcgacaagc tggactttgt tatggtttta aaattcattt
     2161 cccgtaaata gaccgcctgc ctactgatct tggtttgtgt ataacctaac tgtaagtagc
     2221 atagatattt tatttatgac aaaatagtta aaatagtttg actttggtcc ctacatgttt
     2281 ctggctagga caaaacaagc cacatgaaac tgatggtatc tttgtctcct gtgtctctta
     2341 tcaaccaaac cacattttat gatcacgctt atgttttcgc ta
//
LOCUS       XM_071832053             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841860), mRNA.
ACCESSION   XM_071832053
VERSION     XM_071832053.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139841860"
                     /note="uncharacterized LOC139841860; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841860"
     CDS             1..555
                     /gene="LOC139841860"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688154.1"
                     /db_xref="GeneID:139841860"
                     /translation="MKKLLRRKFLPANHRQEAFLDYHNLQQLSLSVEELIHEFDKLRM
                     RCDVNEKEEQIIAQFLGTLKPEIADVVSLQPYLMYEDVCRLALKVEKQQSKGKSKVTF
                     GHGNINPKPNPVVIDKGKGEQFIKVSTQGGNIRAPRCFKCQGLGHYARECPNQRIVTL
                     WDDSSAPVYDTEEDYENTTTPQCE"
     misc_feature    <1..195
                     /gene="LOC139841860"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    409..462
                     /gene="LOC139841860"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
ORIGIN      
        1 atgaagaaat tgttgaggcg aaagttcttg cccgcaaacc ataggcaaga agcttttctt
       61 gactaccaca atttacaaca gctttcgttg agtgttgaag agttaataca tgaatttgat
      121 aaattgcgca tgcgatgtga tgttaacgag aaggaggaac aaatcatagc tcagttttta
      181 ggaactctca aaccggaaat tgctgatgtg gtaagtctac agccttattt gatgtatgaa
      241 gatgtttgta ggttggcact caaggtggaa aaacaacaaa gtaagggtaa atcaaaggtg
      301 acatttggac atggtaatat caacccgaaa ccaaaccctg tcgtgattga taaaggaaag
      361 ggggaacaat tcataaaagt gtcaacacaa ggaggtaaca ttcgagctcc caggtgtttt
      421 aagtgtcaag gattgggtca ttatgctcgt gagtgcccaa atcagcgcat tgttaccctt
      481 tgggatgatt catctgctcc agtttatgat acagaagagg attatgagaa cacaacaact
      541 cctcagtgcg aataa
//
LOCUS       XM_071832054             753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841861), mRNA.
ACCESSION   XM_071832054
VERSION     XM_071832054.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..753
                     /gene="LOC139841861"
                     /note="uncharacterized LOC139841861; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841861"
     CDS             1..753
                     /gene="LOC139841861"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688155.1"
                     /db_xref="GeneID:139841861"
                     /translation="MGSKLHFSSSHHSQTDGQTEVVNWSLRNLMRSLVREHPKQWDLT
                     LAQAEFAFNSSVNRITGDSVNKGNFLELLHWLARHSENIGHVVLKNAPKNSKITCSSI
                     QKNIVSAAATEVEKAIAKEIGGDFFFILVDESCGVSCKEQMSLVLSFVNNEGVVIERF
                     VGIKQVNDTSALSLKSAIYSMLLGHGLSPCIIRGQGFDGASNMSGAFNGMKTLIMRES
                     ESAHVIHCFAHQLQLALVFVAKNHCSINEFFQ"
     misc_feature    <184..627
                     /gene="LOC139841861"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atgggttcca aactacactt tagtagttca caccattcac aaacggatgg tcaaaccgaa
       61 gttgtcaact ggagcttgag aaatctaatg cgaagtttgg tgcgggaaca ccctaaacag
      121 tgggacttaa ctttggctca agcagaattc gcttttaata gctcggttaa ccggataaca
      181 ggtgattcag ttaacaaagg taattttctt gaattgctac attggttagc acgtcactca
      241 gagaatattg gtcatgttgt gttaaagaac gcaccaaaga attcaaaaat aacttgtagt
      301 tctatacaaa aaaatattgt gagtgctgct gcaaccgagg ttgagaaagc tattgcaaaa
      361 gagattggag gtgatttctt tttcatttta gtagatgagt cctgtggtgt atcttgtaaa
      421 gagcaaatgt cactagtatt gagctttgtg aataatgaag gggttgttat tgagaggttt
      481 gtcggaatca aacaagttaa tgacacttca gctttgtcac tgaagtctgc catttattca
      541 atgttgttag gacatgggtt gagtccgtgt ataatccgag ggcaaggttt tgatggagct
      601 agtaatatga gtggcgcgtt caatggtatg aagactttaa tcatgagaga atcggaatct
      661 gcacatgtta ttcattgttt tgcacaccag ttacagttag cacttgtgtt tgttgcaaaa
      721 aatcattgtt caataaacga attctttcaa taa
//
LOCUS       XM_071832055             816 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841862), mRNA.
ACCESSION   XM_071832055
VERSION     XM_071832055.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..816
                     /gene="LOC139841862"
                     /note="uncharacterized LOC139841862; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841862"
     CDS             1..816
                     /gene="LOC139841862"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688156.1"
                     /db_xref="GeneID:139841862"
                     /translation="MFRHFKKLGESRNFVCDSVTTNLDEEQDHVEETPLEEDEHEHQT
                     PLKKYTKVGLNELVTDPGERLNMELYHSSQRDEIKRKYLLKGPCQPQNHSIRQRKIGV
                     QGGADNFVKGGFQAWNKKERVDVHDASMPHTIAVEKCQNSYCDKVYRYVRSHIENEDS
                     VNKGNFLELLHWLARHTENIGHVVLKNAPKNSQMTCSSIQKDIVHAAATEVEKAIAKE
                     TGDEFFFVLVDKSRDVSCKEQMSLVLCFVNNEGVVVERFVGIKQVNDTSALSL"
     misc_feature    319..813
                     /gene="LOC139841862"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atgttccggc acttcaaaaa attgggggaa tcaaggaatt ttgtttgtga ttcggtaact
       61 acaaacttag atgaagaaca agaccatgtt gaagaaacac cacttgaaga ggatgaacat
      121 gaacatcaga ccccacttaa aaagtataca aaagttggct tgaatgaact tgtaactgat
      181 ccgggagagc gtttgaacat ggaactctac cattcaagtc aacgagatga aattaaaaga
      241 aaatacttgc taaaaggtcc ttgtcaaccc caaaatcatt caattcggca aagaaagatt
      301 ggagttcaag gaggagcaga taattttgtt aaaggtggat ttcaggcatg gaataagaaa
      361 gaacgcgtag atgtacacga tgctagcatg ccacatacta tagcagtaga aaagtgtcaa
      421 aattcttatt gcgacaaggt ttatcgatat gtacgtagtc atattgaaaa tgaagattca
      481 gttaacaaag gtaattttct tgaattgttg cattggttag cacgtcacac agagaatatt
      541 ggtcatgttg tgttaaagaa cgcaccaaag aattcacaaa tgacgtgtag ttctatacaa
      601 aaagatattg tgcatgctgc tgcaaccgag gttgagaaag ctattgcaaa agagactgga
      661 gatgagttct ttttcgtttt agtagacaag tctcgtgatg tatcttgtaa agagcaaatg
      721 tcactagttt tatgctttgt gaataatgaa ggggttgttg ttgagaggtt tgtcgggatc
      781 aaacaagtca atgacacttc agctttgtca ctgtag
//
LOCUS       XM_071832056             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841863), mRNA.
ACCESSION   XM_071832056
VERSION     XM_071832056.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139841863"
                     /note="uncharacterized LOC139841863; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841863"
     CDS             1..588
                     /gene="LOC139841863"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688157.1"
                     /db_xref="GeneID:139841863"
                     /translation="MDKAFKMLETLVDDSDDEKIVSFVNSLTQEEVDGEASSSRVPRS
                     RIYIARDREDAAIRLYNDYFAESPVFPARYFKRRFQMSRELFLRIVEGISNFNSVVIP
                     DYFMYFRERPDATGRQSLTILQKCTAAIRQMAYGTTPDLQHLRKPTAEDIARLYNFHA
                     QKHGLPDGTAPPSPFEVNGRRYERGYYLGIGIYPD"
     misc_feature    <502..>582
                     /gene="LOC139841863"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataaag ctttcaaaat gttagagact cttgtggatg attcggatga cgaaaagatt
       61 gttagttttg ttaatagttt aacgcaagaa gaagtcgatg gagaggcaag tagttctcga
      121 gtccctcgat cccgaattta tattgctagg gatcgagaag atgcggctat aaggttatac
      181 aatgattatt ttgcggagtc accggtgttt cccgctagat attttaaacg acgttttcaa
      241 atgagtcgtg agttatttct tcgaattgtt gaaggtatat ctaattttaa tagtgtcgtt
      301 attcctgatt attttatgta ttttcgggaa cggcccgatg caacgggccg tcaaagtttg
      361 acaattctcc aaaagtgcac agcagccata cgtcaaatgg cgtatggaac aactcctgat
      421 ttacagcatt tgcgaaaacc aactgccgaa gatattgcta gactttataa ttttcatgca
      481 caaaaacatg gtttaccgga tggaactgct ccaccttcac catttgaagt aaacgggcgt
      541 cgctacgaaa gaggatatta cttaggtatt ggtatatacc cagattga
//
LOCUS       XM_071832057             357 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841864), mRNA.
ACCESSION   XM_071832057
VERSION     XM_071832057.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..357
                     /gene="LOC139841864"
                     /note="uncharacterized LOC139841864; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841864"
     CDS             1..357
                     /gene="LOC139841864"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688158.1"
                     /db_xref="GeneID:139841864"
                     /translation="MAKRGSMPPRYAITGVSLLPRVQDRGLRLGDPLSPFLFMTDAEG
                     LIKGAEIRADSIMISQLQYVDATIFWSGTENMSETLIKQLKNFEYIISGLKVNSNQSC
                     VYGIGGTNTELDEMAS"
     misc_feature    <76..345
                     /gene="LOC139841864"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    88..90
                     /gene="LOC139841864"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggcgaaac gcggctcaat gccgccgcga tacgccatta ccggtgtttc tttgctgcca
       61 cgcgtgcaag atagaggttt gaggctaggt gatccgcttt ctccttttct ttttatgact
      121 gatgcggagg gtctcattaa aggtgctgag ataagggctg atagtattat gatttcccaa
      181 ttacagtatg tggatgccac gattttttgg agtggaacag aaaatatgtc tgaaacactt
      241 atcaaacagc ttaaaaactt tgaatacatt atctctgggc taaaagtaaa ttcaaaccaa
      301 agttgtgtat acgggattgg tgggactaat acggagcttg acgagatggc atcatga
//
LOCUS       XM_071832058             615 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841865), mRNA.
ACCESSION   XM_071832058
VERSION     XM_071832058.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..615
                     /gene="LOC139841865"
                     /note="uncharacterized LOC139841865; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841865"
     CDS             1..615
                     /gene="LOC139841865"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688159.1"
                     /db_xref="GeneID:139841865"
                     /translation="MVQLTGKKSYACIRAEIKRENLQIELAMFRRCFSKGGDTESDAA
                     KTAIENMDELTKTLPEADLYGLGVRASDLWGKLPSRNAVHMENIQLKSENKELTEENV
                     HLKEQLASKNGSDAEDITTHGLTVVNVAPRLKVGDEVFVHNILNPSKKVGRGWLRSVD
                     PTEVICGVEIGDDWCAVRLQHVLKKVLMWLSHLMRLKKLKTLQA"
     misc_feature    412..>555
                     /gene="LOC139841865"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
ORIGIN      
        1 atggtgcagc tgaccggtaa aaagagttat gcatgtatac gtgcggagat aaagagggaa
       61 aatctccaaa tcgaattggc tatgtttcga agatgttttt cgaaaggagg cgatactgaa
      121 agtgatgcag ctaaaaccgc aattgaaaac atggatgagc taactaaaac actgcctgaa
      181 gcggatttgt atggattagg tgttcgagct tctgatcttt ggggtaaatt accaagtcgt
      241 aatgctgttc atatggagaa cattcaactc aagtcagaga acaaagaact tactgaagaa
      301 aatgtacatc tgaaagaaca gttggcaagt aagaatggtt cagatgctga agatatcaca
      361 acacatggcc tcactgtagt caatgtagct ccacgtctta aggtcggaga tgaggttttt
      421 gtacacaata tacttaaccc tagcaagaag gtaggaagag gatggttgag gagcgtggat
      481 ccaactgagg taatttgcgg tgtagagatt ggagatgatt ggtgtgcggt acgccttcaa
      541 catgtcctta aaaaggtgtt gatgtggtta agccatttga tgcgattaaa aaagttgaag
      601 acgctacagg cgtaa
//
LOCUS       XM_071832059             456 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841867), mRNA.
ACCESSION   XM_071832059
VERSION     XM_071832059.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..456
                     /gene="LOC139841867"
                     /note="uncharacterized LOC139841867; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841867"
     CDS             1..456
                     /gene="LOC139841867"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688160.1"
                     /db_xref="GeneID:139841867"
                     /translation="MMKNVSINFPITDVLKGMPNYDRFIKGLIFQRAKYQDETSFFIE
                     EDCNKILASRPRIPKKLGDPGKFVFPCKFGNSEVFNALADLGASINLMPHSLRERLGL
                     GTLKPTRIRIILANHSFDSTIGIAEDILVNIDTLVFPVDFVIMEMKEDL"
     misc_feature    205..441
                     /gene="LOC139841867"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(250..252,256..258,262..264,334..342)
                     /gene="LOC139841867"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    250..258
                     /gene="LOC139841867"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    250..252
                     /gene="LOC139841867"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(334..345,355..366)
                     /gene="LOC139841867"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgatgaaaa acgtctcgat caactttcca atcaccgatg tgcttaaagg aatgccaaac
       61 tacgatcggt tcatcaaggg gctaatattt caaagggcta aatatcaaga tgaaacatct
      121 ttctttattg aagaggattg caataagatt cttgcatcaa ggccaaggat tcctaagaag
      181 ttgggagatc caggaaaatt cgttttccct tgtaagtttg gtaactcgga agtcttcaat
      241 gcacttgctg atttgggtgc aagcattaac ttaatgcccc attcacttcg cgagagactc
      301 ggccttggaa ctcttaaacc gacccgtatt aggataatat tggctaatca ttcatttgac
      361 agcactattg gtatcgctga ggacatcttg gttaacattg acaccttggt gttcccggtt
      421 gattttgtta tcatggagat gaaggaggat ctttaa
//
LOCUS       XM_071832060            2358 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139841868), mRNA.
ACCESSION   XM_071832060
VERSION     XM_071832060.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2358
                     /gene="LOC139841868"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841868"
     CDS             1..2358
                     /gene="LOC139841868"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071688161.1"
                     /db_xref="GeneID:139841868"
                     /translation="MEPEREYDISDEDINEIQNDDDYNSPKATATRKNETPGGSLYYA
                     PIVDKLFLPVIGHNYGTLDQCEEMYRLYAYHACFDIRKAGQKTAKSGLVKQKYYLCNK
                     AGTPKEVYFDTLQETKKPIRKSNMECTGCRAKVRFDWVYGTDTFVLADFEEQHNHELL
                     PIEYRHLSKKERQMRYAEKLFVYHSTVSNIGPTKAYEVYSNMKGSEKNVHGTVIDFRN
                     WKRDLNVFINATDSQMLVNKMEERKKYVPGFSFEYKLEKSQLHSIFWADEVAKCNYKE
                     FSDVISFDATYRTNRYNLKFVPFTGIDNHRRCVTVAAAMIKDETAESYKWLLNCFMKT
                     FGKEPNMIVTDQDKSMAIAIKEVFKTAKHRLCMWHIMRKVPSKIQEANPNIEDKQEKD
                     FKKRFDKIVWNMYIEPTVFEEKWEKLMDDFSLKNDSWFKYMFDVRSSWIPAYFIETEM
                     FGLMRTTSRSESENAFFSHFTRSASNLLTFMDGFESAMLKQRSKQESLDVQTIKKNPK
                     LLTLLRIEKHASKVYTNTIFLIIQQEIVAALYKCSLDKMDKEEYTEIFVVKEKLEKRK
                     ECSNEGKKNEGSNEGKKDEGSSMEDKREGSNEEKEFFKYKVLITCDWLIHQFHTFFIM
                     KNDNIDEIPEKYIMRRWRRDIIPPELRSRRNRYGNENIAVQNSINEITSVIDDCVELI
                     GQDETMLQVLLEKVKMVKKEVEAQVPKQFKKKDDVIQEMVGVSKPNSLDIQNPPVGRY
                     KGCGKDKRLMSGKEKGILESKKRKITCSNCGSHEHNCRGCDKDKR"
     misc_feature    46..>1977
                     /gene="LOC139841868"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggaaccag agagggaata cgatatcagt gatgaagaca tcaacgaaat ccagaatgat
       61 gatgattata attcaccaaa agcaactgca acacgtaaaa acgaaacacc gggtggatca
      121 ttgtattatg caccaattgt tgacaaactt ttcttaccgg tcattggtca taattatgga
      181 acacttgatc aatgtgaaga gatgtatagg ttatatgcat atcatgcatg ttttgacata
      241 agaaaggctg gacaaaaaac tgcaaaatct ggattagtga aacaaaagta ttacttatgc
      301 aacaaggctg gcacaccaaa ggaagtctac tttgacacat tacaagaaac taaaaagcca
      361 attcggaaaa gcaacatgga atgcacagga tgtagggcta aagttagatt cgactgggtg
      421 tatggaacag atactttcgt tcttgctgac tttgaagaac aacataatca tgagttgcta
      481 ccgatagaat acagacattt aagtaaaaag gaaagacaaa tgaggtatgc agagaagttg
      541 tttgtatacc attcgacggt atcaaatatt ggtccaacaa aggcatacga agtttacagc
      601 aatatgaaag ggtctgaaaa aaatgttcat ggaactgtaa ttgacttcag aaactggaaa
      661 cgagatttga atgtgtttat caatgcaact gattctcaaa tgctcgttaa caaaatggaa
      721 gaaaggaaaa aatatgttcc tggtttttca tttgagtaca agcttgaaaa aagtcaatta
      781 cattccattt tctgggctga tgaagttgca aagtgcaact acaaggagtt tagtgatgtt
      841 atctcatttg atgcaacata tagaactaac aggtacaacc tcaagtttgt accatttact
      901 ggaatagata accaccgtag gtgtgtcact gttgctgcgg caatgatcaa ggatgaaaca
      961 gccgagagtt acaaatggct acttaattgc ttcatgaaga cattcgggaa agagccaaac
     1021 atgattgtga cagatcagga taaatcaatg gcgatagcca taaaagaggt ctttaagacg
     1081 gcaaagcata gattatgcat gtggcacatt atgaggaagg tgccatcaaa gattcaagaa
     1141 gcaaatccta atattgaaga taaacaagaa aaagacttca agaagagatt tgataaaatt
     1201 gtgtggaata tgtacataga accaactgtt tttgaagaaa aatgggaaaa gttgatggac
     1261 gatttttcat tgaagaatga cagttggttc aaatatatgt ttgatgttag atcaagttgg
     1321 ataccagcat atttcatcga gactgaaatg tttggtttga tgcgaactac ttcaagatca
     1381 gagagtgaaa atgctttttt ttcacacttt acaagatctg catcaaatct gttgactttt
     1441 atggacggct ttgaatctgc catgttaaaa cagaggtcaa aacaagaatc tttggatgta
     1501 cagacaatca agaaaaaccc aaaattatta acgttgctaa gaattgaaaa acatgcatca
     1561 aaggtataca cgaatacaat ttttctgatt attcaacaag agattgttgc agctttgtat
     1621 aaatgttcgt tggataaaat ggacaaagag gaatacacgg aaatatttgt tgttaaagag
     1681 aaattggaaa agagaaagga atgctcgaat gaagggaaga aaaatgaagg ttcgaatgaa
     1741 gggaaaaaag atgaaggctc aagtatggag gataaaaggg aaggctcgaa tgaagaaaaa
     1801 gagttcttca aatacaaggt acttatcact tgtgattggc ttatacatca gtttcatact
     1861 tttttcatta tgaagaacga taatatagat gaaatccctg aaaaatacat aatgaggcgt
     1921 tggagaaggg atataatacc accagagtta agatcaagga gaaacagata tggcaacgaa
     1981 aacattgctg ttcaaaattc tattaatgaa atcacatcag ttattgatga ttgtgttgaa
     2041 ctaattgggc aggatgaaac gatgctacaa gtgcttcttg aaaaagttaa aatggtgaag
     2101 aaagaagttg aggctcaagt gccaaaacag tttaagaaaa aagatgatgt catacaagaa
     2161 atggttggtg tttcaaaacc taattcatta gacatacaaa acccaccggt tgggagatac
     2221 aaaggttgtg gaaaagataa gcgtctcatg agtggaaaag agaaaggaat tttggaaagc
     2281 aaaaaaagaa agattacttg cagtaattgt ggatcacatg aacacaattg caggggttgt
     2341 gacaaagaca aacgttga
//
LOCUS       XM_071832062            2842 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841869), mRNA.
ACCESSION   XM_071832062
VERSION     XM_071832062.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2842
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2842
                     /gene="LOC139841869"
                     /note="uncharacterized LOC139841869; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841869"
     CDS             116..2842
                     /gene="LOC139841869"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688163.1"
                     /db_xref="GeneID:139841869"
                     /translation="MAKSEHSLIKKSSSAEKHVPANKKAPAKTTGKRKHQSVTNAVDN
                     PKQKHKVKDVPSDDEVESKLPALRLRTTPTQFAKVMCSLTPEQKVCVTRLGFRSLIGF
                     NIDQLPGNLVYYVVDNFDGDEMIIKTQKGNIKVDSQAVHDVFGLEDVGTDIDTLELKL
                     GSLFVQNWLNQFPPPPFVTRSSSLCSKILTSTEVDSIFQMNFIMLFASTMVSCERNGK
                     VSSYVLMRLSDDVDISSINWSMFLLSSLKYSKNGWNRNDPNCFYTGAATFLTLLYLDR
                     TKFDSFPVVRGRPVFKNWKGAIAVRAKKEAELGSFGLLELADEYDEEAENGEGFLKLE
                     DEDKADLRAIEGYCEVIEEKFKLVNELKHFLSRTIRESLSKYPDEKILISYEKKLNEV
                     FKMDVCDVKTDDEMEDESEGKDDDDVNNDESEGKDDDDDDDDDHDDDEKNADSEKKDD
                     ECVDVNKVESEKKIDDGQSKADDDVNDEQEVNLDSDDPIVPVVTEVVGPKVAEKDVDK
                     DQNEEEYTSLTQWFNNNVNEEDKYENKEYDEAVKLLDKGKLASSPEVGKTLPKQTAVQ
                     SKKFCKKAIKKDRTIVLRSAYINKLTVVSDILTNSELILAMELFSMKLSPSETVFESR
                     KGSMIHRLSLESLCPDVYVEASVIDLWSFILNEEQKYRGQSSPSRFFFPSSIIYSYLY
                     DNKNMKKEDKLMIIKESANAWFRFFPKLASLRKVDLVFFPICRHGHFFVLVIDMKVPK
                     LYILDNSSVVKNYAARYAKVFNLLLYAFAEHMKFHKHPFANQIEKLERIRISLPWKTI
                     DNVVDCGVFAMFHMDMFKARSENEWSDVLVPESAEQKNQLRKLRIRYASKILSHDLNI
                     HAEQMLRNARNFAAFHEKKDYRKVIISAKQSRGVRVEKAKNQEVHDQQSNEE"
     misc_feature    <965..>1318
                     /gene="LOC139841869"
                     /note="sulfate ABC transporter protein; Validated; Region:
                     ycf16; CHL00131"
                     /db_xref="CDD:214372"
     misc_feature    2039..2653
                     /gene="LOC139841869"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 tctttctagg gtttcaacat cgaccgctaa tttccttcga tcaacaccga tcaaagctgc
       61 cattatcaac aatcatcaac agctatacac attaatcgat tatcttccat caaacatggc
      121 taaatcggag cattctctaa tcaaaaaatc gtcgtcggct gaaaagcatg ttccggctaa
      181 taaaaaagct ccggccaaaa ctactggtaa aagaaaacac cagtctgtta ccaatgccgt
      241 tgataatccc aaacagaaac acaaagttaa ggatgttcct tctgatgatg aagttgagtc
      301 taagctacct gctcttaggc taaggacaac accgacgcag tttgcaaagg tgatgtgttc
      361 gttgaccccc gaacaaaaag tttgtgtcac gagacttggg tttcgttctt taattgggtt
      421 taatatagac caattgccgg gtaatcttgt ttactatgtt gttgacaatt tcgatggtga
      481 tgagatgata ataaagactc aaaaaggaaa cattaaggtt gattcccaag ctgtccatga
      541 tgtgtttgga ctcgaagatg ttggtactga tatagacacc ttggaactca agcttggtag
      601 tctttttgtt caaaattggt tgaatcagtt tccaccaccc ccgtttgtca cccgttcatc
      661 ttcactgtgt tctaagatcc tgacctcaac ggaagttgat agtatctttc agatgaactt
      721 tatcatgttg tttgcaagca cgatggtgtc atgtgaaaga aatgggaaag tgagttcgta
      781 tgtgttgatg aggttgtctg acgatgttga tatttcaagt atcaactggt ccatgtttct
      841 tctttcttca ttgaaatata gcaaaaatgg atggaacaga aatgatccca actgtttcta
      901 caccggtgct gctacttttc tcaccctgct atatctcgac cgtacaaagt ttgattcttt
      961 tcctgttgtt cgtgggcgtc cagttttcaa gaactggaaa ggagccattg cggttcgtgc
     1021 aaagaaagag gctgagctcg gatcatttgg gctgttggaa cttgcagatg aatatgacga
     1081 agaagcagaa aatggggagg gttttctcaa acttgaagat gaggataagg ctgatctgcg
     1141 tgcgattgag ggttattgtg aagttatcga ggagaagttt aaattggtca atgagttgaa
     1201 gcatttttta tcacggacaa tacgtgaaag tttgtccaag tacccagatg agaagatatt
     1261 gatatcttat gaaaagaagt tgaacgaagt ctttaaaatg gatgtgtgtg atgtgaagac
     1321 tgacgatgag atggaggatg agtcagaggg aaaagacgat gatgatgtca acaatgatga
     1381 gtcagaggga aaagacgatg atgatgacga tgatgatgac cacgatgatg atgagaagaa
     1441 tgctgattcg gagaaaaaag atgatgaatg tgttgatgta aacaaggttg agtctgagaa
     1501 aaagattgat gatgggcaat ccaaggctga tgatgatgtg aatgatgagc aagaagttaa
     1561 tcttgattcc gatgatccaa ttgttccagt tgtgacagaa gttgtaggtc caaaggttgc
     1621 tgagaaagat gttgacaaag atcaaaatga agaagagtac acatctttga cacaatggtt
     1681 taacaacaac gttaatgagg aggataaata tgagaacaag gagtatgatg aagctgtgaa
     1741 attgttagac aagggcaagt tggcaagcag ccctgaagtt ggaaaaacgt taccgaaaca
     1801 aacggctgtc cagtcaaaga aattttgtaa aaaagctata aagaaagatc ggacaatcgt
     1861 tcttagatct gcttatatca acaagctgac tgttgtgtct gacattctga caaactctga
     1921 gcttattttg gctatggaat tattttcgat gaagcttagc ccttctgaga ctgtttttga
     1981 atcaagaaaa ggcagcatga tacaccgtct tagtttggaa tcactttgcc ccgatgttta
     2041 tgttgaggct agtgtaattg atttatggag ctttatactg aacgaagagc aaaagtacag
     2101 aggacaatct agcccgtcta ggtttttttt cccttcttca atcatttatt cttacttgta
     2161 tgacaacaag aacatgaaaa aggaagataa gctgatgata atcaaagaaa gtgctaatgc
     2221 ttggtttcga ttttttccaa agcttgcgtc actccgaaaa gttgatcttg tatttttccc
     2281 aatctgcaga catgggcatt tctttgtctt ggtgattgac atgaaagttc ccaagctcta
     2341 catacttgac aactcttcgg tagttaaaaa ctatgctgca agatacgcca aagttttcaa
     2401 tcttttgcta tatgcttttg ctgaacatat gaaatttcat aagcatcctt ttgcaaatca
     2461 aattgaaaaa ttggaacgaa ttaggatttc gctgccatgg aaaacaatag ataatgttgt
     2521 ggattgtggc gtgtttgcta tgttccacat ggacatgttt aaagcaagat cagagaatga
     2581 gtggtctgat gtattggtgc ctgagtcggc tgaacaaaag aatcagctac ggaagctgag
     2641 gattcgctat gcatcgaaga ttttgtcgca tgatctaaac atacatgctg agcagatgtt
     2701 aagaaatgca agaaattttg ccgcattcca tgaaaagaaa gattatagga aggttatcat
     2761 ttctgcaaaa caatcaagag gtgtccgagt tgaaaaagct aaaaatcaag aggtgcatga
     2821 ccagcaatct aatgaagagt ga
//
LOCUS       XM_071832063             978 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841871), mRNA.
ACCESSION   XM_071832063
VERSION     XM_071832063.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..978
                     /gene="LOC139841871"
                     /note="uncharacterized LOC139841871; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841871"
     CDS             1..978
                     /gene="LOC139841871"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688164.1"
                     /db_xref="GeneID:139841871"
                     /translation="MDANNGILPLAYGIEAGDTTDHWTWFFGNLRDSLQSSGCCIDNL
                     TIISDRAPAIAVGISIVFPEVFHVLCARHLLGNLKSVSKRVKSYEWNYWKMCKAYRKS
                     DFDHHYGILSRRIPDKCKLGKRNRKSLTWTVKPISQVKFEVMDMKKGGKVNLQDKTCT
                     CKQWQFFGLPCGHVMAVAKYFVLRDITTHVQKYFHTETYKSAYMKDINPLDHISEWID
                     PGHLQTVRPPLVTKRQSGRPKSTARIPSQGEDKDNFKSKRKCNRCLKYGHTRSTCTAH
                     YDLSEGTQKSKCKSKTKAKPKGMVKEKGKGKREDSCSTQFESTYNLSDD"
     misc_feature    <4..231
                     /gene="LOC139841871"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    469..549
                     /gene="LOC139841871"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atggatgcta acaatggaat ccttccatta gcctacggta ttgaagcagg agataccacc
       61 gatcattgga catggttttt tggtaatcta agagactctc tacagtcttc ggggtgttgt
      121 attgataatc ttaccattat atctgacagg gcacctgcaa tagctgttgg catatcaatt
      181 gtatttccag aagtgtttca tgtactatgt gctagacatt tgttgggaaa cctcaaaagt
      241 gtgtctaaaa gggttaaaag ttacgagtgg aactactgga aaatgtgcaa agcgtataga
      301 aaatctgatt ttgatcacca ctatggtata ctatcacgac gtattccaga caagtgtaag
      361 ctgggtaaaa gaaatcgtaa gtctcttact tggactgtca aaccgatatc acaagttaag
      421 tttgaggtaa tggatatgaa aaaaggcggt aaagtcaatc tacaagataa aacttgcaca
      481 tgtaaacaat ggcagttttt cggtctacct tgtggacatg taatggcagt agcaaagtat
      541 tttgtcctac gtgacattac tacacacgtt cagaagtatt tccacactga aacgtacaag
      601 tctgcataca tgaaagacat taacccgcta gatcatattt ctgaatggat agatccagga
      661 cacctacaaa ccgtccgacc gccattggtt acaaaacgac aatcaggtag accgaagagt
      721 actgctcgta taccgtccca aggagaagac aaagacaatt tcaaatctaa aagaaaatgc
      781 aatcgttgct tgaaatatgg acatactaga tcaacttgca ccgcacatta tgatctatct
      841 gaaggtacac aaaagtccaa gtgtaagtca aaaacgaagg caaagccgaa ggggatggta
      901 aaggagaagg ggaagggaaa acgtgaagac tcatgctcaa cacaatttga atcgacttac
      961 aatttgagtg atgattag
//
LOCUS       XM_071832064            1523 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At3g49140-like (LOC139841872), mRNA.
ACCESSION   XM_071832064
VERSION     XM_071832064.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1523
                     /gene="LOC139841872"
                     /note="uncharacterized protein At3g49140-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139841872"
     CDS             1..1341
                     /gene="LOC139841872"
                     /codon_start=1
                     /product="uncharacterized protein At3g49140-like"
                     /protein_id="XP_071688165.1"
                     /db_xref="GeneID:139841872"
                     /translation="MVIAIYMSLCHTCGLSHSEGISCSTSYGVTSSWMKSSDNLESRF
                     RCRNPFLRDSQFNWWLPIGRKNCKQIVSVAADYPDSVPESSNYVAKNGYHPLEELKNC
                     KRVRETKLTGAEIAKTTIEANSSALLIFPGTVHCEPHEHISWAEYPYVIDDGGDIYFR
                     VPDDANIMHDPEATNAVNALIGMDLPFFQNQQLSIPMGHISDNSVDDITFFDDYYEDE
                     GADMLADFTEWNIPIDSAGVHPIYFAKCLTKAANMEYARKMDHPSNGVSVLGCLSPAY
                     VDEEFYLRRLFSIEDGDSYDQNWKDEDVNFNASLFYRLEIMRIELFSVYGVQSAINLQ
                     DFRDAEPDILAHSIPDIIAHFDENILNSNLALRSLCKKNGFYVEEANIIGIDSLGMDV
                     RVFTGHEVRTHRFPFKIRATSETAAEKQIQQLLFPRARRKRLTKNRADVAHRME"
     misc_feature    <931..1272
                     /gene="LOC139841872"
                     /note="Putative heme iron utilization protein, contains
                     PNPOx domain [Inorganic ion transport and metabolism];
                     Region: HugZ; COG0748"
                     /db_xref="CDD:440511"
     polyA_site      1523
                     /gene="LOC139841872"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggtgattg caatatatat gtctctgtgt catacatgtg gtttgagtca ttctgaaggc
       61 attagttgct ctacatcgta tggagtcact agcagttgga tgaaatcttc tgataattta
      121 gagtcaagat tcagatgcag gaatccgttt cttagagatt cccaattcaa ttggtggctg
      181 cctattggtc gaaaaaattg caagcagata gtttcggtgg cggcagatta tcccgattca
      241 gtcccggaat catcaaatta tgttgcaaaa aatggatatc atccacttga agagcttaaa
      301 aattgtaaaa gagttcgtga aaccaaactc acgggtgcag agatagcaaa aacaactatt
      361 gaggctaata gcagcgcatt gttgatattt cctggtaccg tacattgtga accgcatgag
      421 cacatctcgt gggcggaata tccgtacgta attgacgatg gtggagatat atacttcaga
      481 gtccctgatg atgcaaacat catgcatgat cctgaagcaa ctaatgcggt gaatgctttg
      541 attgggatgg atcttccatt ttttcagaat caacaattat ctattcctat gggtcatatt
      601 tctgataact ctgtcgatga catcactttc ttcgatgact actatgaaga tgagggtgct
      661 gatatgttgg ctgactttac tgaatggaat ataccgatcg attctgctgg tgttcaccct
      721 atttattttg ccaagtgttt gacaaaggct gctaatatgg agtatgctag aaagatggat
      781 catccctcaa acggtgtttc ggttcttgga tgccttagtc ctgcttatgt tgatgaagag
      841 ttttatctaa gaaggctatt tagtattgaa gatggtgata gctatgacca aaattggaaa
      901 gatgaagacg tcaactttaa cgcctcactt ttctacagac tggaaattat gagaatagag
      961 ttgttctccg tgtatggagt tcagtcagcg ataaatttgc aagatttcag agatgctgaa
     1021 cctgatattc ttgcgcactc gattcctgat atcattgcac actttgatga gaatatactc
     1081 aactctaatc ttgcacttag atctctatgc aaaaagaacg gattttatgt cgaggaagca
     1141 aatataatcg gcattgatag tcttggtatg gatgtaagag ttttcactgg gcatgaagtt
     1201 agaacccatc gttttccttt caagatccgg gcaacatcag aaacagctgc agaaaagcag
     1261 atccaacagc tcttgtttcc cagggcacgg cgcaaacggt taaccaagaa tcgagctgat
     1321 gtagctcatc gaatggaata gaatttgtaa caaattaggg tttatgatag attaaaaata
     1381 aagaaatgta taatgttaca tgttcacttg atttgtgttg ttaagtttac ttgaataaag
     1441 tcatagctga aaagtgactt gttttattgc attaagtgct gtttcaataa agaaaaaata
     1501 ataaaatgca agtacttcat atc
//
LOCUS       XM_071832065            2798 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides clathrin interactor EPSIN
            2-like (LOC139841874), mRNA.
ACCESSION   XM_071832065
VERSION     XM_071832065.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2798
                     /gene="LOC139841874"
                     /note="clathrin interactor EPSIN 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841874"
     CDS             567..2768
                     /gene="LOC139841874"
                     /codon_start=1
                     /product="clathrin interactor EPSIN 2-like"
                     /protein_id="XP_071688166.1"
                     /db_xref="GeneID:139841874"
                     /translation="MKKAFDQTVRDIKRGVNKTVLKVPSVEQKVLDATSNEPWGPHGS
                     LLADIAMASRNYHEYQMIMTVIWKRINDTGKNWRHVYKGLTVLEYLVANGSERVIDEI
                     REHAYQITSLSDFQYLDHTGRDQGSNVRKKSQSLVALINDKEKIQEVRQKAASNWDKF
                     HNTSGGGKYRPGSYPGSGGFDDDRNYGSRDNGYGREREWGDDKYGSRDGDRYGEERYG
                     RDRYRDEESRSRSYDGDNYSRRSKSSDRDRERAYENDGPYSSRDGETKSASLPVATSH
                     DAAVSSSHVVAPPPIAATSPPLPVDTMPPLPAATSATEINGFDEFDPRGSFGSFPAAP
                     PTSGGSETNLFGSSSDPFSLNELAIVPVTTTTSEPDTFTNSNPAGPTFVAASSAPGGT
                     SQPFDDPFGDGPFRAVPSTDGLSAPPQSASPFSQSSGPPQPAVPTPDAGNNFGYGTSF
                     DQTTDILADLLPPPGPSQTSFQTPLGQNTFPSSYPGQPSFQGGQFASQPGFPSQGGQT
                     AGAGGFPSQLGSGFPGSNGQPTNQTNFYGGFEPQVSSAPVQPVPQVTATSSYYQQPKA
                     QSGSTLNASTGALVMVPQEPAKFETKSTVWADTLNRGLVNLNIAGSKTNPMSNIGVDF
                     EALNRKEKRMEKPSATPMTSNVTMGKAMGSGSGIGRAGVGPLRPQPNPMMGPSMAGPA
                     YGAGYVSMNQQPMGQFQMQPPSAGYPPPSGPYNPMMVRGVGYGQQPYGGYR"
     misc_feature    642..992
                     /gene="LOC139841874"
                     /note="Epsin N-Terminal Homology (ENTH) domain family;
                     Region: ENTH; cd03571"
                     /db_xref="CDD:340772"
     misc_feature    order(657..659,669..674,771..773,789..791,801..803)
                     /gene="LOC139841874"
                     /note="phosphoinositide binding site [chemical binding];
                     other site"
                     /db_xref="CDD:340772"
     misc_feature    <1089..1316
                     /gene="LOC139841874"
                     /note="Pre-mRNA-splicing factor 38-associated hydrophilic
                     C-term; Region: PRP38_assoc; pfam12871"
                     /db_xref="CDD:463734"
     misc_feature    <1335..2354
                     /gene="LOC139841874"
                     /note="large tegument protein UL36; Provisional; Region:
                     PHA03247"
                     /db_xref="CDD:223021"
ORIGIN      
        1 ctgaatctgt taaataaata gtaaaatgac aaaaagctag aagctaaaag ctaagcacta
       61 cttctagtag cttttagctt tttccacatg tctaaaagct ttaagctcct ctaaccaaaa
      121 gaagcttttt attaaatatc agctgttttc atagaagcta aaagctccaa taagctcctc
      181 gccaaacata gcctttgttt caaactcaag tttacggtaa tcaatgtaaa cacatgtcaa
      241 catactctct tataggttca attttgatta tgttgacaga atcttggatg aagttcatca
      301 tgtttaggat tttaagattt cacacacttt gtttataggt ttcgttatct ttcgttaggc
      361 cattattagg agaaaccgat ttcagaatgt gcaattggaa catgtttact ctgtttatct
      421 attattatta tactaaaatt atgttgattt atatttcatt atatatttca tgagctgaat
      481 attgctccag tctctttatt taccctgaat ctgggtattt ttggtgtctt tcagttggtg
      541 agtgtttgca aatttttttg cagacaatga agaaggcctt tgatcaaact gtcagggaca
      601 ttaaaagagg agtcaacaag acagttctta aagttccttc agtggaacaa aaagttcttg
      661 atgctacaag taatgagcct tggggtcctc atggatcgct tctggctgat attgcaatgg
      721 cttcaagaaa ttatcatgaa taccagatga tcatgacggt gatctggaag cgtatcaacg
      781 atacagggaa aaattggcgc catgtgtaca agggtttgac ggttcttgaa tacttggtag
      841 caaatgggtc agagcgtgtc atagatgaga ttagggaaca tgcttatcag ataacgtcct
      901 tgtcagattt tcagtatctt gatcatactg ggagggatca ggggagcaat gtaaggaaga
      961 agtcgcaaag tcttgtggcg ctaattaatg ataaagaaaa aatacaagaa gttagacaga
     1021 aggctgcctc taactgggac aagtttcata acacgtcagg aggtggaaag tacaggcctg
     1081 gttcgtatcc tggttcagga ggttttgatg atgatcgtaa ttatggaagt agagataatg
     1141 gttacgggag ggaaagagaa tggggtgatg ataaatacgg tagtcgtgat ggagatcgtt
     1201 acggggaaga acgatacgga cgggatcgat atagggatga agaatcacgc agtagaagtt
     1261 atgatggtga caactatagc cgaagaagta aaagttctga tagagatagg gaacgtgctt
     1321 atgaaaatga tggaccatat tcttcaaggg acggagagac aaaatctgca tccctgcctg
     1381 tagctaccag tcatgatgcc gctgtttcta gcagccatgt agttgcacca ccgccaatag
     1441 ccgctacttc acctccacta ccagtagaca cgatgcctcc tctacctgct gccacctcag
     1501 ctacggaaat taatgggttt gatgaatttg atcctcgtgg ttcatttggt tcgtttccag
     1561 cagcaccacc aacttcaggt ggttctgaaa caaatctatt cggttcttcc tcagaccctt
     1621 tctctttgaa tgaattggct attgtgccgg ttacaactac aacttctgaa cctgatactt
     1681 tcacgaactc gaatcctgct gggccaacat ttgtggctgc atcttcagca cctggtggca
     1741 ctagtcagcc ttttgatgat ccttttggtg acggtccttt tagagctgtc ccatctactg
     1801 atggattatc ggccccacca caatcagctt ctcccttcag ccaaagttca ggcccacctc
     1861 aaccagcggt tcctacacca gacgcgggaa ataactttgg atatggaacc agttttgacc
     1921 aaactactga tatcctagct gatctcctgc caccacctgg accttcacag acaagttttc
     1981 aaactccact tggccaaaac acattcccgt cgagttatcc tggtcaacct tcatttcaag
     2041 gtggtcaatt tgcatcgcag cctggtttcc cgtcccaagg tggtcaaacc gcaggtgcag
     2101 gtggttttcc atctcaattg ggatccggtt ttcccggttc caatggtcaa ccaactaatc
     2161 agaccaactt ttatgggggt tttgaacctc aggtttcttc ggcgccggtg caacccgtgc
     2221 ctcaagttac tgcgacttca agttattatc aacagccaaa agctcaatcg ggttctacct
     2281 taaatgcctc aactggtgcc cttgttatgg ttcctcaaga accagccaag tttgagacta
     2341 aatccactgt ctgggctgac acgttgaatc gtgggcttgt taatctaaac atagctggat
     2401 ctaaaacaaa cccgatgtct aatatcgggg ttgactttga agccttgaat cggaaggaga
     2461 agagaatgga gaaacctagc gcaaccccta tgacttcgaa tgtaaccatg ggtaaggcca
     2521 tgggttcagg ttctgggatt ggacgtgctg gtgtgggtcc gctcagaccc caaccgaacc
     2581 ccatgatggg ccccagcatg gctggacctg cttatggagc aggttatgtc agcatgaacc
     2641 agcagcctat gggtcagttt cagatgcaac ctccttcagc tggttatcca cctccgtctg
     2701 gaccttacaa tccaatgatg gttcgcggtg ttggttatgg tcaacagcca tatggcggct
     2761 acagatgaat atcgagtcaa cttaaatgta ggaatacg
//
LOCUS       XM_071832066             339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841875), mRNA.
ACCESSION   XM_071832066
VERSION     XM_071832066.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..339
                     /gene="LOC139841875"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139841875"
     CDS             1..339
                     /gene="LOC139841875"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688167.1"
                     /db_xref="GeneID:139841875"
                     /translation="MAVKNILKYLRRTKDMFLIYGGVEEDLTAKCYTDASFQTDRDDS
                     RSQSGYVFILNRGAITWKSSKQKVVAQSTTEAEYIAASEAAQEAAWMKKFITDLGVMP
                     SIEDPIEIFL"
     misc_feature    88..>333
                     /gene="LOC139841875"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggctgtca agaacatcct aaagtacttg agaaggacta aagatatgtt cttaatttat
       61 ggtggtgtgg aagaagatct tactgcaaag tgctacacag atgctagctt ccaaactgat
      121 agagatgatt cacgatcaca atctggatat gtctttatct tgaatagagg agctataact
      181 tggaaaagtt ctaagcagaa agtagttgca caatctacta cagaagctga atacattgct
      241 gcatcggagg ccgcacaaga ggctgcatgg atgaaaaagt ttattactga tttaggtgtg
      301 atgccaagca tagaagaccc catagaaata tttttgtga
//
LOCUS       XM_071832067             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841876), mRNA.
ACCESSION   XM_071832067
VERSION     XM_071832067.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139841876"
                     /note="uncharacterized LOC139841876; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841876"
     CDS             1..804
                     /gene="LOC139841876"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688168.1"
                     /db_xref="GeneID:139841876"
                     /translation="MSPNATTPVHHLSLRSVLEKEKLNDTDFLDWYHNFVLKVEKKSY
                     ILDGPVPEEPPANATKSIRDAWTKHTDDSTEVACLMLATMIPDLQKDLEHHDAFEMLK
                     QLKEMFQQQARQQRFETVRALHACKMTEGTSVSSYVLKMKSYIDQLERLGSSIGPELA
                     IDLILNSLPKSYDQFVLNYNMNNLEKSISELHLMLKTVEKNIPSKPSEVLMIREGKIK
                     KPQAKGKGKGKPKSQGNYKGKKFVPKDSVKKKEKPAKDATCFHCGEIGH"
     misc_feature    <361..573
                     /gene="LOC139841876"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcaccca atgcaactac acccgttcac cacctttctc taagatctgt cttagagaag
       61 gaaaaactca atgatacgga cttcttagac tggtatcata attttgttct caaagtcgaa
      121 aagaagtcgt atatacttga tggacccgtt cccgaggaac cccctgctaa tgccactaag
      181 agcatccgag atgcttggac taagcacaca gatgactcca cagaggtagc ttgcctcatg
      241 ttagccacca tgattccaga cttgcaaaag gacctggaac atcatgatgc ctttgagatg
      301 cttaagcagc taaaggaaat gttccagcaa caagctaggc aacaacgctt tgaaactgtc
      361 agagcgttac acgcatgcaa gatgacagag gggacatctg taagctctta tgttctaaaa
      421 atgaagagct acatagatca gcttgagagg cttggatctt ccattggtcc tgagttggca
      481 atagacttga tcctcaactc actaccaaag tcatatgacc agttcgtctt gaactacaat
      541 atgaacaatt tggagaaatc tatctcggag ttgcatttaa tgcttaagac tgtcgagaag
      601 aatattccat ccaaaccctc tgaagtcctc atgattcggg aaggaaaaat caaaaagcca
      661 caagccaaag gcaaaggtaa aggcaaacct aagagtcaag gcaactataa aggcaaaaag
      721 tttgtcccaa aggattctgt taagaagaaa gaaaaacctg ccaaagatgc cacttgtttc
      781 cattgtggag aaattggtca ttga
//
LOCUS       XM_071832068            4635 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuclear pore complex protein
            NUP214-like (LOC139841877), mRNA.
ACCESSION   XM_071832068
VERSION     XM_071832068.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 12% of CDS bases
            frameshifts          :: corrected 2 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                JBITNF010000004.1  383146773-383146847
            76-211              JBITNF010000004.1  383146849-383146984
            212-411             JBITNF010000004.1  383147715-383147914
            412-580             JBITNF010000004.1  383148162-383148330
            581-724             JBITNF010000004.1  383148577-383148720
            725-849             JBITNF010000004.1  383149432-383149556
            850-962             JBITNF010000004.1  383149724-383149836
            963-1096            JBITNF010000004.1  383150118-383150251
            1097-1259           JBITNF010000004.1  383150338-383150500
            1260-2079           JBITNF010000004.1  383150903-383151722
            2080-2232           JBITNF010000004.1  383152266-383152418
            2233-2290           JBITNF010000004.1  383152560-383152617
            2291-2424           JBITNF010000004.1  383153055-383153188
            2425-2549           JBITNF010000004.1  383153282-383153406
            2550-2862           JBITNF010000004.1  383153475-383153787
            2863-2907           JBITNF010000004.1  383153895-383153939
            2908-3058           JBITNF010000004.1  383153941-383154091
            3059-3283           JBITNF010000004.1  383158109-383158333
            3284-4471           JBITNF010000004.1  383159184-383160371
            4472-4535           JBITNF010000004.1  383160543-383160606
            4536-4635           JBITNF010000004.1  383160836-383160935
FEATURES             Location/Qualifiers
     source          1..4635
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4635
                     /gene="LOC139841877"
                     /note="nuclear pore complex protein NUP214-like; The
                     sequence of the model RefSeq transcript was modified
                     relative to its source genomic sequence to represent the
                     inferred CDS: deleted 2 bases in 2 codons; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841877"
     CDS             1..4635
                     /gene="LOC139841877"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 2 codons;
                     substituted 1 base at 1 genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1420..1422,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: nuclear pore complex
                     protein NUP214-like"
                     /protein_id="XP_071688169.1"
                     /db_xref="GeneID:139841877"
                     /translation="MAETHTLNVIRVEEEIEGDQTPTNNNRFSKIGEHISIASDADFK
                     FDVNSLPSCPLAVSQRFDAIFVAHSSGFCVAKMKDVVEELTKGGIGSCVQEPSVVDVS
                     IGKVSILALSADSSMLAATVGFKLYFFSVASLLNKDHEPSFIKSLDGSSYFKDMQWSP
                     HSEDQYVVLASDGNLYRGAGQDELNNLMNKVDAATWSITEKSLAVAKYGYLHILSSKF
                     EEKLRIKLLFDSMVDDNLDCVVKVDFVRWVRPDCLMLGCYCLNADVKEENYLLQLISV
                     KDGKSTSPSSSPVALTFNDVFIAIDDGTVPPGSGPYTFTSYLEELKLAFVANKNTNEH
                     IVLFAWSSDMENGASKIEIETEAWFPTIPLQANDDENMILGLAFNKVHKDETVTLPCG
                     DGDTRVAPYGILLCLTVDGKLIMFPFASATGPSALPKDFNPVYDEEVESPILSSQHPV
                     TNIFNDKNESEGEALQTQKIEDSXPSKKAISHIFRDDTQQDAFVIKPNSNKDEGQSLS
                     LQKQENNYETALLKASAPDNLLTKEVDTIKEKPDFVLKSANDKLNKAPFGASSGSFVS
                     SNVFATQSSLGSFSIKESFFSRTSDVKSFQSPHSAVQRNPPVTTHVPSGPQKFSFSKM
                     TSSSSASTNLFSKGASTGAAVTKSVFVVSDAQSNLEKTSNFKFYEKGNLNQHTPSRCI
                     NSEPNLSEQHSVEEMAKELDTLLDSIVGPGGFYDASVAVYKPSIAALEQGIWLLSDKC
                     QKSTDTLHRAMEEVQFLLDKTVQVLARKVYMEAIVKQATDSQYLDIWNRQKLSSELDM
                     KSRHILEINKNLTNQLIELERHLNTLELQRFGNNSDVQMNRRSFHTKQNTPRHIQSFH
                     SLHNTMNAQLTAAEKLSENLLKQMAVLSIDTEPVKKTNVQKELFDTIGNSYNTTAFTS
                     KVIMSSNSDSTHKDMKKNELGTVKSFEPETARRGRYSLDKNWASIEPPKATVKRILLQ
                     ENRQMSPGRLSLPFGTQKFNQRLPERSESSVISHGSSHGALNMSQSRGSQDTQIKRRS
                     EEQSNSSPWSNYSSDSSKYPLTSPKSNQQSRSFLDLSSNNTKSVVTNLFEKKPTEYTE
                     SNTNMFVPSASSSTTFSGKSFSLEASRSESPSSIAVSSVPVTLASSPFSFKDTASSSK
                     SATSLGKSSTGFGNKENATQTAPLFGPLPSSTKPTSSIDLNVPKSELSEENPDTSESS
                     IPDLVLTPNFDFKLNEEASSQTSTSSFSASQLNMTPTSSPALSATSFKPEQQSIPVDG
                     VGGQINGSDVAVTQEDEMEEEAPDIAQLTLGNLGGFGLGSSPNPSVPKQNPFSAPFSN
                     APANTPITSFTLSAPTGGLFRLAFFNVESQQPSQPLQQTSIGAFSGGFGSNNNQSSDG
                     QGFGQPARIGSGQQALGSVLGSFGQSRQFGAGLAGSVASPSPFGSGFGGNQTSGGFAS
                     ASSNGGGFAILASGGGGFGGLTAGGGGGFAAAATGDGGFGGAPVIGGGFGGSATGGFG
                     SFSSQGGVVIKRGSPGRWKNLRRLKSVNARWCERRKGWLAVIVSNLNTSI"
     misc_feature    <4084..>4335
                     /gene="LOC139841877"
                     /note="Keratin type II head; Region: Keratin_2_head;
                     pfam16208"
                     /db_xref="CDD:465068"
ORIGIN      
        1 atggcggaaa ctcacacatt aaacgtcatc agagtcgaag aagaaatcga aggagaccaa
       61 actcctacta ataacaacag attcagtaaa attggggaac atatttccat cgcatccgat
      121 gccgatttca aattcgacgt aaacagtctt ccatcttgtc cgttggctgt ctcgcaacga
      181 tttgatgcca tttttgttgc tcactcgtca gggttttgtg ttgctaagat gaaagatgtt
      241 gttgaagagt tgacaaaggg aggtattggt tcttgtgtac aggagccaag tgttgtagat
      301 gtttctattg gaaaggtttc catattggca ttatctgctg actcttcaat gcttgctgca
      361 actgttggtt tcaagcttta ttttttctca gtggctagtc ttcttaataa ggatcatgaa
      421 ccgtctttca taaaatcgct tgatggctct agctacttca aggacatgca gtggagtcct
      481 cattcggagg accaatatgt tgttcttgca agtgatggta atttataccg tggagctggc
      541 caagacgaac ttaataatct tatgaacaag gttgatgctg ctacttggag cattactgaa
      601 aaatctcttg ctgtggcaaa atatggctac ttgcacatat tatcatcgaa gtttgaagaa
      661 aagttgcgga taaagttact gttcgattca atggttgatg ataatctgga ttgtgttgtt
      721 aaagttgatt ttgtcagatg ggttcgtcca gattgtctca tgttgggttg ctattgtctg
      781 aatgctgatg tgaaggagga gaattatctg cttcaactca tcagtgtcaa agatggtaaa
      841 agtacaagtc cttcttccag tccagtggca ttgaccttta atgacgtgtt cattgctata
      901 gatgatggta ccgtcccgcc tggaagtgga ccctatacgt tcacgagtta cttggaggaa
      961 cttaaacttg catttgttgc taataagaac accaatgaac atattgtgct atttgcttgg
     1021 tcgtcagata tggagaatgg agcctcaaag atagaaatag aaactgaagc atggtttcca
     1081 acaattcctc ttcaagctaa cgatgatgag aatatgatcc tggggctcgc attcaacaaa
     1141 gttcacaagg atgagacagt tacactccca tgtggtgatg gagatacaag agttgcacct
     1201 tatggcattc ttctgtgcct taccgttgat ggaaaactta taatgtttcc ttttgccagt
     1261 gccacaggcc cttcagcact gccaaaggat tttaatcctg tatatgatga agaagtggag
     1321 tcacctattc tcagttctca gcatcccgtg acaaatattt ttaatgataa gaacgaaagt
     1381 gagggtgagg ctctacaaac tcagaaaatt gaagacagtt aaccaagtaa gaaagcaatt
     1441 tctcatatat ttagagatga tacgcaacaa gatgcttttg ttataaagcc gaatagtaac
     1501 aaagatgaag ggcagtcact ttctttacag aaacaagaaa acaattatga gaccgcattg
     1561 cttaaagcat ctgcacctga taatctttta actaaagaag ttgatacaat caaagaaaaa
     1621 cctgattttg ttttaaagtc tgcaaatgat aaattaaata aagcaccttt tggagcttca
     1681 agtggatcat tcgtttcctc taatgttttt gcaacacaat cttcattggg atcattttct
     1741 attaaagaat catttttttc tagaacttct gatgtgaagt cttttcaatc acctcattct
     1801 gctgttcaac gaaatccacc cgttaccacg catgttcctt ctggtcctca gaaattttca
     1861 ttttccaaaa tgacttctag ttcgtcggcc tcaaccaatc ttttttcaaa aggagcttca
     1921 actggagctg cagttaccaa atcggtgttt gttgtttctg atgcacaatc aaatttggaa
     1981 aaaacttcta actttaagtt ttatgagaag ggaaatctta accagcacac tccgtcaaga
     2041 tgtataaatt ctgagccaaa tctatcagaa caacacagtg ttgaagagat ggcgaaagaa
     2101 ctagacactt tgttggattc tattgtggga ccaggtggtt tctatgatgc ctctgttgct
     2161 gtatataaac catccattgc agcactagaa caaggcattt ggctactgtc agacaaatgc
     2221 caaaagtcga ccgacacatt gcatcgagca atggaagagg ttcaatttct tcttgacaag
     2281 acggttcaag ttttggcgag aaaagtatat atggaagcaa ttgttaaaca agctacagat
     2341 agtcaatact tggatatctg gaatcgccag aagttgagct ctgaactgga tatgaaaagt
     2401 agacatatct tagagataaa taagaatttg acaaatcaac ttatagaact tgaaaggcat
     2461 ttaaacaccc tcgagctcca aagatttggt aacaatagtg atgtacaaat gaatcgcaga
     2521 tctttccata caaaacaaaa tacaccaagg cacattcagt cttttcacag cctacacaac
     2581 acaatgaatg cacagttaac agctgcagag aaactttctg aaaatctttt aaagcaaatg
     2641 gctgtgctta gtatagacac ggagcctgtg aagaaaacaa atgtgcaaaa ggagctattt
     2701 gacactatag gaaactccta caatactacc gctttcacga gtaaagttat aatgtcttca
     2761 aattcagatt ctacccataa agatatgaag aaaaatgaac taggtacggt gaagagtttt
     2821 gaaccagaaa ctgcaagaag gggcagatac tcgcttgata agaactgggc tagcattgaa
     2881 cctccaaaag caactgtaaa aaggatactt ttgcaagaga accgtcagat gagtcctggt
     2941 agattaagtt taccatttgg tactcaaaag tttaatcaac ggttgcctga acgttcagag
     3001 agctctgtga tttctcacgg ttcttcacat ggagccttaa atatgtctca aagcagaggc
     3061 agccaggata cacagataaa aagacgttcc gaggaacagt caaattcttc accatggagt
     3121 aattacagtt cagattcatc aaaatatcct ctaacttcac caaaatctaa tcaacagtct
     3181 cggagtttct tggatctttc gtcaaataac acaaagtcag tggtgacaaa tttgtttgaa
     3241 aaaaaaccta ccgaatatac agaatctaat actaatatgt ttgtgccgag tgccagctca
     3301 tccaccacct tttcaggaaa aagtttctct ctggaagctt ctagaagcga aagtccatct
     3361 tccattgcag tatcatctgt tcccgttact ttagcatcat cacccttttc ttttaaagat
     3421 accgcttcat cttcaaaatc tgctacatcg ctcggtaaat catcaaccgg tttcggtaat
     3481 aaagagaatg ctactcagac tgcccctctt tttggacctt taccttcttc aactaaaccc
     3541 acatcgagca tagatttgaa tgttcccaaa tctgaactgt ctgaagagaa tccagataca
     3601 agtgaaagtt ctatacctga tttagtttta actcccaatt ttgacttcaa actaaatgag
     3661 gaggcttcaa gtcaaacttc aacaagttcc ttttcagcaa gtcaactcaa catgactcct
     3721 acaagtagtc ctgcattatc agcaacaagt ttcaaaccag aacaacaatc aatccctgtg
     3781 gatggggttg gtggacaaat caacggttca gatgttgcgg ttacacaaga agatgagatg
     3841 gaggaagaag ctcctgacat tgctcaactt acattgggaa atcttggtgg ctttggtctc
     3901 ggatcaagcc caaacccgtc tgtacccaag cagaatccct tcagtgcacc atttagtaac
     3961 gcaccagcaa atacaccaat cacttctttt actctttccg caccaactgg tggacttttt
     4021 agacttgcat tctttaacgt tgaatctcaa caaccttccc agccacttca gcagacaagt
     4081 attggtgcat tttctggtgg ctttgggagc aacaacaatc aaagcagtga tggacaaggg
     4141 tttggacagc ctgctcggat tggatctggc caacaggctt tagggtcggt tcttggttct
     4201 tttggacaat cgagacaatt tggtgctggt ctagctggaa gtgttgcttc tccaagtcca
     4261 tttggcagtg gctttggtgg caatcaaact tctggtggtt ttgcctctgc ttcttcaaat
     4321 ggtggtggat ttgctattct ggcctcaggc ggtggtggct ttggtggttt aactgcaggt
     4381 ggcggtggtg gttttgctgc tgcagccact ggcgatggtg gttttggtgg tgctccagtc
     4441 attggtggtg gatttggtgg atcggctact ggtggctttg gaagttttag cagtcaagga
     4501 ggtgttgtga ttaagagggg atcgcctgga cgttggaaaa atttgaggag gttgaaaagt
     4561 gtgaacgcta gatggtgtga acgcagaaaa gggtggctag ccgtaatcgt ttccaatttg
     4621 aatacttcta tatga
//
LOCUS       XM_071832069            2082 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841878), mRNA.
ACCESSION   XM_071832069
VERSION     XM_071832069.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2082
                     /gene="LOC139841878"
                     /note="uncharacterized LOC139841878; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841878"
     CDS             1..2082
                     /gene="LOC139841878"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688170.1"
                     /db_xref="GeneID:139841878"
                     /translation="MNGTFQEVSSVSTKPIEGSHSDTHPPGFSQPHDQNVSMCSVPSV
                     NCQTPFILLNHECVADFSTDLSDDIFGIGELLGFSIKESKLSRLHMFCLRSFWGNPNF
                     DYALSLARGFSGGIISIWDPKVFIRRDIWCDDNFVIVKGKWLRLDMDIFMVNVYAPQL
                     LADKRILWEKLSNFALSHPGEYIFMGDWNSVRTSDERCGWVFCPQDANIFNDFIESNA
                     LYEVPLGLVLPRGYSDHSPLLLFQDKVDFGPTYFKIFDSWFSRPDFDATVRLAWDSIS
                     NDHNLDIVAKFRLLKGHLKSWIHTARSNEAKMLKEITGKIDELDIIIDLGSASLGDVE
                     LRNSLATEKSDLTKLIDLDSLQKARVKWDVEGDENSKFFHCSLKHKHRIQHIQGLLVD
                     GVWLDDPNDIKSRFYEFFKSKFDAHDSDFIFSNPRPNNCLSEEEAAVLELDVYDEEIK
                     RAVWDIRGFFASCSMPRGANSAFFSLIPKILVNGSPTREFELKRGLRQGYPLSPFLFI
                     IVMEGLHLAFRHAMECNLIRGLKVGTENIHLSHLLYADDVIIFSDWSALELRRILLIL
                     EVFYRASSLKLNIDKSHVFSIGVDDYEVVSLANATGTRAGTFPTTYLGIPIGSNMKLV
                     SNWNSLCDKFRSKLSSWKASLISAGGRLTLVKSVMGSLGIYWFSMFKCPETILNRLES
                     IRATFFWGGGE"
     misc_feature    238..>606
                     /gene="LOC139841878"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    <1483..1851
                     /gene="LOC139841878"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1495..1497
                     /gene="LOC139841878"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgaacggga catttcaaga agtgtcatct gtttcgacta aaccgataga aggcagtcat
       61 agtgatactc acccacccgg attctcacaa cctcacgatc aaaatgtcag tatgtgttct
      121 gttccatcgg ttaattgcca gacccctttc atattactta atcatgaatg tgttgctgat
      181 tttagtactg atcttagtga tgatatcttt ggtattggtg agcttctcgg gttctcaatc
      241 aaagaatcta agttgtctcg attacacatg ttttgtctca gatctttttg gggtaatccc
      301 aattttgatt atgctttgag tttggctaga ggtttttcag gaggtatcat ctctatttgg
      361 gatcccaaag tttttattag aagagatatt tggtgcgatg ataatttcgt tatagtcaag
      421 ggtaaatggc ttcgtcttga tatggatata tttatggtta atgtttatgc gcctcagctg
      481 ttggcggata aacgtattct ttgggagaaa ttgtctaatt ttgctctgtc tcatccgggc
      541 gaatatattt ttatgggtga ttggaattct gttagaactt cagatgaacg gtgtgggtgg
      601 gttttttgcc ctcaagatgc gaacatattt aacgatttca ttgagtctaa cgcgttatat
      661 gaagtgcctt taggcttagt gctacctcgg ggttattcag atcattctcc gcttctttta
      721 tttcaagaca aagtagattt tggcccgact tatttcaaga tttttgattc ttggttctcc
      781 cgtccagatt ttgatgctac tgttcggctt gcgtgggatt cgattagtaa tgatcataat
      841 ctagatattg tggctaaatt tagattatta aaaggtcatt tgaagagttg gatccacact
      901 gctagatcga atgaagcgaa gatgttgaaa gagattacgg gaaagataga tgagttagac
      961 attattattg atttgggttc cgctagtctc ggtgatgtgg agttacgaaa ttccttagct
     1021 actgaaaaga gtgatttaac caaactcatt gatcttgatt ctctccagaa agctagagtt
     1081 aaatgggatg tggagggaga tgaaaactcc aaattttttc attgttctct taaacataaa
     1141 catcgcattc aacacatcca aggtctcctt gtggacgggg tttggttaga cgatccgaat
     1201 gacattaaat ctagatttta tgagtttttt aaatctaaat ttgatgctca tgattctgat
     1261 ttcattttta gcaatcccag gccgaacaat tgtttatcag aggaagaagc ggcagttttg
     1321 gaattagatg tctatgatga ggaaattaaa agagcggtgt gggacattag aggttttttc
     1381 gcttcttgtt ccatgcctcg aggtgcaaat tcggccttct tttctcttat ccctaagatt
     1441 ctagttaatg gctctccgac ccgtgagttt gaattgaaaa ggggtttgag acaaggctac
     1501 cctctaagcc cgtttctctt tattattgtt atggaaggcc tccatttggc ttttcgtcat
     1561 gccatggaat gcaatcttat acgtgggtta aaagtaggta cggagaatat tcacctttct
     1621 catcttttat atgcggatga tgtgattatt ttttcagatt ggagtgctct tgagttgaga
     1681 cgtattcttc tcatattgga ggtgttttat agagcttcca gtttaaagtt gaatattgat
     1741 aaatcccatg ttttcagtat tggggtggat gattatgaag tggtttcttt agctaatgcc
     1801 acgggtactc gggcaggtac gtttcctact acttatttag gaattcctat tggctctaat
     1861 atgaaacttg tgtcgaattg gaactcatta tgtgataaat ttcgttccaa attatcttca
     1921 tggaaggcaa gtcttatttc tgcgggtgga agattgacgt tggttaagtc agttatggga
     1981 agtttaggga tttattggtt ctctatgttt aaatgtcctg agactattct taatcgtctt
     2041 gaatcgattc gagctacatt cttttgggga gggggggagt aa
//
LOCUS       XM_071832070            3210 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841879), mRNA.
ACCESSION   XM_071832070
VERSION     XM_071832070.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3210
                     /gene="LOC139841879"
                     /note="uncharacterized LOC139841879; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139841879"
     CDS             1..3210
                     /gene="LOC139841879"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688171.1"
                     /db_xref="GeneID:139841879"
                     /translation="MNGTFQEVSSVLTKPIEGSHSDTHPPGFSQPHDQNVSMCSVPSV
                     NCHTPFILLNHECVADFSTDLSDDIFGIGELLGFSIKESKLSRLHMFRLRSFWGNPNF
                     DYALNLARGFSGGIISIWDPKVFIRRDIWWDDNFVIVKGKWLRLDMDIFMVNVYAPQL
                     LADKRILWEKLSNFALSHPGEYIFMGDWNSVRTLDERCGWVFCPQDANIFNDFIESNT
                     LYEVPLGGLKYSWRNKTGSKFSKIDRFFITDNVLNALHDLKGLVLPRGYSDHSPLLLF
                     QDKVDFGPTYFKIFDSWFSRPDFDATVRLAWDSISNDHNLDIVAKFRLLKGHLKSWIH
                     TARSNEAKMLKEITGKIDELDIIIDSGSASLGDVELRNSLATEKSDLTKLIDLDSLQK
                     ARVKWDVEGDENSKFFHCSLKHKRRIQHIQGLLVDGVWLDDPNDIKSRFYEFFKSKFD
                     AHDSDFIFSNPRPDNCLSEEEAAVLELDVYDEEIKRAVWCCVLVNGSPTREFELKRGL
                     RQGDPLSSFLFIIVMEGLHLAFRHAMECNLIRGLKVGTENIHLSHLLYADDVIIFSDW
                     SALELRRILLILEVFYRASSLKLNIDKSHVFSIGVDDYEVVSLANATGTRAGTFTTTY
                     LGIPIGSNMKLVSNWNSLCDKFRSKLSSWKASLISAGGRLTLVKSVMGSLGIYWFSMF
                     KCPETILNHLESIRATFFWGGGSNSVKKMSWVKWEKVLATFDKGGLNVGSLKAFNLAL
                     IFKWWWRFLMNPNDMWVNVIKSIHGQCFDGTHSSSSSVWSNIVASCLKVTEDKLLPDD
                     IFRMLIGNGGNIRFWYDLWVGSEPLSYRFNRILHLDLAPNECISEKWVDGNWLFNWVR
                     PNLSGRNEMLLDNLLELIGKPILFDRSDSWTCTISKDGSYTVKNARHFIDRCLLPSSQ
                     VVTVWYTFVPIKVNIFLWHFRLDSLPVRWILSARGIDVSSIVCPSCNNGVESRDYLFF
                     ECELARDLWHRIRIWLDCGMPQVSSWDSFLSWLEGVRLQPSSKNRIIAVTVSSLWALW
                     RYRNGVVFQDSFCSKSSLFDFIRLITFRWIKNRGHLVSN"
     misc_feature    238..825
                     /gene="LOC139841879"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(244..246,466..468,559..561,565..567,727..729,
                     805..810)
                     /gene="LOC139841879"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(244..246,805..807)
                     /gene="LOC139841879"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(466..468,565..567,808..810)
                     /gene="LOC139841879"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    <1519..1887
                     /gene="LOC139841879"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1531..1533
                     /gene="LOC139841879"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    <2752..2940
                     /gene="LOC139841879"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaacggga catttcaaga agtgtcatct gttttgacta aaccgataga aggcagtcat
       61 agtgatactc acccaccagg attctcacaa cctcacgatc aaaatgtcag tatgtgttct
      121 gttccatcgg ttaattgcca tacccctttc atattactta atcatgaatg tgttgctgat
      181 tttagtactg atcttagtga tgatatcttt ggtattggtg agcttctcgg gttctcaatc
      241 aaagaatcta agttgtctcg attacacatg tttcgtctca gatctttttg gggtaatccc
      301 aattttgatt atgctttgaa tttggctaga ggtttttcag gaggtatcat ctctatttgg
      361 gatcccaaag tttttattag aagagatatt tggtgggatg ataatttcgt tatagtcaag
      421 ggtaaatggc ttcgtcttga tatggatata tttatggtta atgtttatgc gcctcagctg
      481 ttggcggata aacgcattct ttgggagaaa ttgtctaatt ttgctctgtc tcatccgggc
      541 gaatatattt ttatgggtga ttggaattct gttagaactt tagatgaacg gtgtgggtgg
      601 gttttttgcc ctcaagatgc gaacatattt aacgatttca ttgagtctaa cacgttatat
      661 gaagtgcctt taggtgggtt gaaatattct tggcgtaata aaacgggtag caaattcagt
      721 aagattgatc gttttttcat tactgataat gtgcttaatg ctttacatga tttgaaaggc
      781 ttagtgctac ctcggggtta ttcagatcat tctccgcttc ttttatttca agacaaagta
      841 gattttggcc cgacttattt caagattttt gattcttggt tctcccgtcc agattttgat
      901 gctactgttc ggcttgcgtg ggattcgatt agtaatgatc ataatctaga tattgtggct
      961 aaatttagat tattaaaagg tcatttgaag agttggatcc acactgctag atcgaatgaa
     1021 gcgaagatgt tgaaagagat cacgggaaag atagatgagt tagacattat tattgattcg
     1081 ggttccgcta gtctcggtga tgtggagtta cgaaattcct tagctactga aaagagtgat
     1141 ttaaccaaac tcattgatct tgattctctc cagaaagcta gagttaaatg ggatgtggag
     1201 ggagatgaaa actccaaatt ttttcattgt tctcttaaac ataaacgtcg cattcaacac
     1261 atccaaggtc tccttgtgga cggggtttgg ttagacgatc cgaatgacat taaatctaga
     1321 ttttatgagt tttttaaatc taaatttgat gctcatgatt ctgatttcat ttttagcaat
     1381 cccaggccgg acaattgttt atcagaggaa gaagcggcag ttttggaatt agatgtctat
     1441 gatgaggaaa ttaaaagagc ggtgtggtgt tgcgttctag ttaatggctc tccgacccgt
     1501 gagtttgaat tgaaaagggg tttgagacaa ggcgaccctc taagctcgtt tctctttatt
     1561 attgttatgg aaggcctcca tttggctttt cgtcatgcca tggaatgcaa tcttatacgt
     1621 gggttaaaag taggtacgga gaatattcac ctttctcatc ttttatatgc ggatgatgtg
     1681 attatttttt cagattggag tgctcttgag ttgagacgta ttcttctcat attggaggtg
     1741 ttttatagag cttccagttt aaagttgaat attgataaat cccatgtttt cagtattggg
     1801 gtggatgatt atgaagtggt ttctttagct aatgccacgg gtactcgggc aggtacgttt
     1861 actactactt atttaggaat tcctattggc tctaatatga aacttgtgtc gaattggaac
     1921 tcattatgtg ataaatttcg ttccaaatta tcttcatgga aggcaagtct tatttctgcg
     1981 ggtggaagat tgacgttggt taagtcagtt atgggaagtt tagggattta ttggttctct
     2041 atgtttaaat gtcctgagac tattcttaat catcttgaat caattcgagc tacattcttt
     2101 tggggagggg ggagtaactc ggtgaaaaag atgtcatggg taaaatggga gaaagttctt
     2161 gccacgtttg ataaaggtgg gcttaatgta gggagcctca aagcctttaa tttagcctta
     2221 atttttaaat ggtggtggcg ctttttaatg aatccaaacg acatgtgggt caacgttatt
     2281 aaatcaattc atggtcaatg ttttgatggg actcattcga gtagctcctc tgtttggtcg
     2341 aatatcgttg cttcctgtct aaaggtaaca gaggataagt tgctcccgga tgacattttt
     2401 cgcatgttga ttggtaacgg tggtaacatc cgtttttggt atgatttatg ggttggtagc
     2461 gaacctcttt catatcgttt taacagaatt ctccatttag atttggcccc caatgagtgt
     2521 atttcagaaa aatgggttga tggcaattgg ttgtttaatt gggttaggcc caacttaagt
     2581 gggagaaacg agatgttact tgataatctt ctcgaactta ttggtaagcc gattttgttt
     2641 gatcgctcgg attcttggac gtgcactatc agcaaagacg gatcttatac agttaaaaat
     2701 gctagacatt ttattgatcg ttgtttgctt ccgtcttcac aagttgttac ggtttggtat
     2761 acttttgttc ctataaaagt taatatattt ctatggcatt ttcgcttaga ctctcttccc
     2821 gttcgttgga tcctatccgc gagggggatt gacgtttctt ctattgtttg cccttcttgt
     2881 aataatgggg ttgagtctag agattatttg tttttcgagt gtgaattggc tcgtgattta
     2941 tggcacagaa ttcggatttg gctcgattgt ggtatgcctc aagtttcgtc atgggactct
     3001 tttttgtctt ggttagaggg tgttcgttta caaccttctt ccaagaatcg aatcattgcg
     3061 gttacggttt cttctttgtg ggctttatgg cgttatcgga acggtgtcgt tttccaagat
     3121 tcgttttgta gtaaaagtag tttattcgat ttcattagat taattacttt tcgttggatt
     3181 aagaatagag gccatttagt ttcaaattga
//
LOCUS       XM_071832071            2121 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841880), mRNA.
ACCESSION   XM_071832071
VERSION     XM_071832071.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2121
                     /gene="LOC139841880"
                     /note="uncharacterized LOC139841880; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841880"
     CDS             1..2121
                     /gene="LOC139841880"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688172.1"
                     /db_xref="GeneID:139841880"
                     /translation="MNGTFQEVSSVSTKSIEGSHSDTHPPGFSQPHDQNVSMCSVPSV
                     NCHTPFILLNHECVADFSTDLSDDIFGIGELLGFSIKESKLSRLHMFRLRSFWGNPNF
                     DYALNLARGFSGVKGKWLRLDMDIFMVNVYAPQLLADKRILWEKLSNFALSHPGEYIF
                     MGDWNSVRTSDERCGWVFCPQDANIFNDFIESNALYEVPLGGLKYSWRNKTGRKFSKI
                     DRFFITDNVLNALHELKGLVLPRGYSDHSPLLLFQDKVDFGPTYFKIFDSWFSRPDFD
                     ATVRLAWDSISNDHNLDIVAKFRLLKGHLKSWIHTARSNEAKMLKEITGKIDELDIII
                     DSGSASLGDVELRNSLATEKSDLTKLIDLDSLQKARVKWDVEGDENSKFFHCSLKHKR
                     RIQHIQGLLVDGVWLDDPNDIKSRFYVFFKSKFDAHDSDFIFSNPKLNNCLSEEEAAV
                     LELDVYDEEIKRAVWDIRGFFASCSMPRGANSAFFSLIPKILVNGSPTREFELKRGLR
                     QGDPLSPFLFIIVMEGLHLAFRHAMECNLIRGLKVGTENIHLSHLLYADDVIIFSDWS
                     ALELRRILLILEVFYRASSLKLNIDKSHVFSIGVDDYEVVSLANATGTRAGTFTTTYL
                     GIPIGSNMKLVSNWNSLCDKFRSKLSSWKASLISAGGRLTLVKSVMGSLGIYWFSMFK
                     CPETILNRLESIRATFFWGGGVTR"
     misc_feature    <343..753
                     /gene="LOC139841880"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(394..396,493..495,736..738)
                     /gene="LOC139841880"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    <1516..1884
                     /gene="LOC139841880"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1528..1530
                     /gene="LOC139841880"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgaacggga catttcaaga agtgtcatct gtttcgacta aatcgataga aggcagtcat
       61 agtgatactc acccaccagg attttcacaa cctcacgatc aaaatgtcag tatgtgttct
      121 gttccatcgg ttaattgcca tacccctttc atattactta atcatgaatg tgttgctgat
      181 tttagtactg atcttagtga tgatatattt ggtattggtg agcttctcgg gttctcaatc
      241 aaagaatcta agttgtctcg attacacatg tttcgtctca gatctttttg gggtaatccc
      301 aattttgatt atgctttgaa tttggctaga ggtttttcag gagtcaaggg taaatggctt
      361 cgtcttgata tggatatatt tatggttaat gtttatgcgc ctcagctgtt ggcggataaa
      421 cgtattcttt gggagaaatt gtctaatttt gctctgtctc atccgggcga atatattttt
      481 atgggtgatt ggaattctgt tagaacttca gatgaacggt gtgggtgggt tttttgccct
      541 caagatgcga acatatttaa cgatttcatt gagtctaacg cgttatatga agtgccttta
      601 ggtgggttga aatattcttg gcgtaataaa acgggtagaa aattcagtaa gattgatcgt
      661 tttttcatta ctgataatgt tcttaatgct ttacatgagt tgaaaggctt agtgctacct
      721 cggggttatt cagatcattc tccgcttctt ttatttcaag acaaagtaga ttttggcccg
      781 acttatttca agatttttga ttcttggttc tcccgtccag attttgatgc tactgttcgg
      841 cttgcgtggg attcgattag taatgatcat aatctagata ttgtggctaa atttagatta
      901 ttaaaaggtc atttgaagag ttggatccac actgctagat cgaatgaagc gaagatgttg
      961 aaagagatta cgggaaagat agatgagtta gacattatta ttgattcggg ttccgctagt
     1021 ctcggtgatg tggagttacg aaattcctta gctactgaaa agagtgattt aaccaaactc
     1081 attgatcttg attctctcca gaaagctaga gttaaatggg atgtggaggg agatgaaaac
     1141 tccaaatttt ttcattgttc tcttaaacat aaacgtcgca ttcaacacat ccaaggtctc
     1201 cttgtggatg gggtttggct agacgatccg aatgacatta aatctagatt ttatgtgttt
     1261 tttaaatcta aatttgatgc tcatgattct gatttcattt ttagcaatcc caagctgaac
     1321 aattgtttat cagaggaaga agcggcagtt ttggaattag atgtctatga tgaggaaatt
     1381 aaaagagcgg tgtgggacat tagaggtttt ttcgcttctt gttccatgcc tcgaggtgca
     1441 aattcggcct tcttttctct tatccctaag attctagtta atggctctcc gacccgtgag
     1501 tttgaattga aaaggggttt gagacaaggc gaccctctaa gcccgtttct ctttattatt
     1561 gttatggaag gcctccattt ggcttttcgt catgccatgg aatgcaatct tatacgtggg
     1621 ttaaaagtag gtacggagaa tattcacctt tctcatcttt tatatgcgga tgatgtgatt
     1681 attttttcag attggagtgc tcttgagttg agacgtattc ttctcatatt ggaggtgttt
     1741 tatagagctt ccagtttaaa gttgaatatt gataaatccc atgttttcag tattggggtg
     1801 gatgattatg aagtggtttc tttagctaat gccacgggta ctcgggcagg tacgtttact
     1861 actacatatt taggaattcc tattggctct aatatgaaac ttgtgtcgaa ttggaactca
     1921 ttatgtgata aatttcgttc caaattatct tcatggaagg caagtcttat ttctgcgggt
     1981 ggaagattga cgttggttaa gtcagttatg ggaagtttag ggatttattg gttctctatg
     2041 tttaaatgtc ctgagactat tcttaatcgt cttgaatcga ttcgagctac attcttttgg
     2101 ggagggggag taactcggtg a
//
LOCUS       XM_071832072            1101 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841881), mRNA.
ACCESSION   XM_071832072
VERSION     XM_071832072.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1101
                     /gene="LOC139841881"
                     /note="uncharacterized LOC139841881; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841881"
     CDS             1..1101
                     /gene="LOC139841881"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688173.1"
                     /db_xref="GeneID:139841881"
                     /translation="MAGDDTESSTRSVIDITSPYFLTSADHPGLNFVGDNLLRDGNYS
                     DWKSEITNAFLAKNKMGFIDGTIPMPKEGSKDLMNWQRCNAMVRGWLVSSMEKEIKNS
                     VKYATTARYIWIDLEERFNKENAPRAYELRITITMIHQESLSVSAYYTKLRGVWDEMQ
                     SVSPTLKCTCSECTCDVAKSIAQMRDKEKLYNFLMGLNEEYGTVRTQILSRTPLSILG
                     AAFHLVNQDEQQRHVGFSRPVNTDASAFQTKSKNMSRYSRRNYNQSTYKRDDRNVKTK
                     DKTCTYCQKFGHTIDGCFDLIGYPEWWTKKANNPKPQSSRGKTQATILPKAASVQEDK
                     QIITTISKEDYDSLMQLLHTTKGREVHQTQTW"
     misc_feature    70..213
                     /gene="LOC139841881"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    262..633
                     /gene="LOC139841881"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggcaggcg atgatacaga gtctagtaca aggtcagtta ttgatataac ttcaccgtac
       61 tttcttactt ctgccgacca tccagggtta aattttgtag gagataatct ccttagagat
      121 ggcaattaca gtgactggaa aagtgaaatt actaatgctt ttcttgccaa gaacaagatg
      181 ggattcatcg atggaacgat cccgatgcct aaagaaggat caaaggactt aatgaactgg
      241 cagagatgta atgcaatggt tcgaggctgg cttgtaagtt ccatggaaaa ggaaataaaa
      301 aatagcgtga agtacgctac cactgcaaga tacatctgga tcgatcttga agaaagattt
      361 aacaaagaga atgcgcctag agcttatgaa ctacgcataa ccattaccat gattcatcaa
      421 gaaagcttat ctgtatctgc atattacacc aaattacgag gcgtgtggga tgagatgcaa
      481 tcagtgagtc caacactaaa gtgtacctgt tcagaatgta catgcgatgt ggcaaaatca
      541 atagcacaaa tgcgtgacaa agaaaaattg tacaactttc taatgggttt aaatgaagaa
      601 tatggaacgg tgagaacgca gattttgagc aggactcctc tttccatact tggggcagct
      661 ttccatcttg ttaaccaaga tgagcaacaa cgacatgtgg gtttttctcg accagtcaat
      721 accgatgcat ctgcttttca aaccaagagc aagaatatgt caagatattc aagaagaaac
      781 tataatcaat cgacatataa gagggatgat cggaatgtaa agactaaaga caagacgtgt
      841 acatactgcc aaaagttcgg acacaccatt gatggttgct tcgatttaat tggttatccg
      901 gaatggtgga cgaaaaaggc taataaccct aaacctcaat caagtagagg taaaacgcag
      961 gctaccattc tacccaaggc tgcctctgtt caagaagata agcaaatcat aacaactatt
     1021 agcaaagagg attatgattc tttaatgcaa ctgttacata caacgaaggg aagagaagtg
     1081 caccaaacgc aaacatggta g
//
LOCUS       XM_071832073             732 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139841882), mRNA.
ACCESSION   XM_071832073
VERSION     XM_071832073.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..732
                     /gene="LOC139841882"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841882"
     CDS             1..732
                     /gene="LOC139841882"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688174.1"
                     /db_xref="GeneID:139841882"
                     /translation="MEQNLQLKKEDDSGYVDAGQYRRLIGRLLYLTVTRPDITYSVNQ
                     LSQFLSNPQRSHMDATFRVLRYLKTTPGRGLFFPSHGNLDLIACCDASWLSCPTTKRS
                     CTGYFITLGNAPISWRSKKQSIASRSSAESEYRAMASTVCKVLWLRWLLQDFDVAQSE
                     ATPLMCDNDAARLIAVNPVYHERTKHVEMDCYFVREQVASGEIKPCAIRSELQPADIF
                     TKAIGADRFKLLRSKLGVRDLHNPT"
     misc_feature    265..675
                     /gene="LOC139841882"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(268..279,382..390,397..399,499..501,577..579,
                     658..660)
                     /gene="LOC139841882"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggagcaaa accttcagct aaagaaagaa gacgatagtg gatatgttga tgctggacaa
       61 tatcgcagat tgattggacg tcttctgtat ttaacagtca caagacccga tataacatac
      121 tccgtaaatc agcttagtca gttcttgagc aacccacaac gtagtcacat ggatgctaca
      181 tttagagtgc tacgttatct gaaaaccacc cctggacgag ggttattttt cccttcacat
      241 ggaaacttgg atcttatagc ttgttgtgat gcgagttggc ttagttgtcc aaccaccaag
      301 cgctcttgta caggttactt catcacgctt ggtaacgctc ctatatcttg gagatcgaag
      361 aaacaaagca tcgcatctcg ttcatctgcc gaatctgagt atagggcgat ggcttctact
      421 gtttgtaagg ttttatggtt gcgttggttg cttcaggatt ttgacgtggc acaatctgaa
      481 gcaactcctt tgatgtgtga taatgatgca gcgaggctca ttgcagtaaa cccagtgtat
      541 catgaacgta caaagcatgt tgagatggac tgttactttg ttcgtgaaca ggttgccagt
      601 ggagaaataa aaccttgtgc aattcgttcc gagcttcaac cagcagatat tttcaccaag
      661 gctattggag cagatcgttt taaacttcta cgtagcaagt tgggtgttcg tgaccttcac
      721 aatccaactt ga
//
LOCUS       XM_071832074             702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At5g07610-like
            (LOC139841883), mRNA.
ACCESSION   XM_071832074
VERSION     XM_071832074.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139841883"
                     /note="F-box protein At5g07610-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841883"
     CDS             1..702
                     /gene="LOC139841883"
                     /codon_start=1
                     /product="F-box protein At5g07610-like"
                     /protein_id="XP_071688175.1"
                     /db_xref="GeneID:139841883"
                     /translation="MTLVFDPLKSPHYKLVCVRTYSNRVSGRIEVYSSKSKSWVSSVS
                     HDDLKIDCRFYFQTIAGVYWNGAIHWACRYSIFYLKINESRGDKIPLPVRPYNFNKPW
                     WRCYPPLVESRDSLMLFDVFYSSGYVIDIYTLNTDYSGWCKKYHLDIIFDFPVGEYLG
                     SSYLIHCFFPGVRDDDAFLVIETPSKAVIRYNLVSKTFQKLCDLDLSTRAGSYTDIWD
                     QGLVAFPFFESLSHV"
ORIGIN      
        1 atgactttag tttttgatcc tcttaaatct cctcattata aacttgtttg cgttcgcacc
       61 tattcaaatc gtgtttctgg acgtattgaa gtttactcat cgaaaagcaa gagttgggtg
      121 tcttctgtga gtcatgatga tctaaagatt gactgcaggt tttatttcca gactatagct
      181 ggagtatatt ggaatggtgc aattcattgg gcatgtcgtt actcgatttt ttatcttaag
      241 atcaatgaga gtcgaggcga taaaattcct ttacctgtac gaccctacaa ctttaataaa
      301 ccatggtggc gttgttatcc acctcttgtt gaatctcgtg attctttgat gttatttgat
      361 gttttttatt catcgggtta tgtgattgat atttatacat tgaacacaga ctactctggt
      421 tggtgcaaaa agtatcatct agacattatt tttgattttc ctgtagggga gtatctaggt
      481 tcttcatatt taatacattg tttctttccg ggagtaagag atgatgacgc atttttggtg
      541 atagaaactc cttcgaaggc tgttataaga tacaatttag tgtccaagac ttttcaaaag
      601 ctttgcgatc ttgacttgtc tactcgagcc ggatcttata cagatatatg ggatcaaggg
      661 cttgttgctt ttcctttttt tgaatctctt tctcatgtct aa
//
LOCUS       XM_071832075            1152 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At5g07610-like
            (LOC139841884), mRNA.
ACCESSION   XM_071832075
VERSION     XM_071832075.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1152
                     /gene="LOC139841884"
                     /note="F-box protein At5g07610-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841884"
     CDS             1..1152
                     /gene="LOC139841884"
                     /codon_start=1
                     /product="F-box protein At5g07610-like"
                     /protein_id="XP_071688176.1"
                     /db_xref="GeneID:139841884"
                     /translation="MSMTTSSAELVSHDDILTQILLRLPIRSIVRFKCVSNHWRHLLS
                     SPRFALLHRNFNANRMIPSGLFIRRNICFSSNFWEEEETYYVFVSLDPEKPVQPPFKS
                     LDYMKSFDRMQDLFPSTRAGMIKVMQSSNGLLLIRTQTEDNYYYYVYNPTINQCTAVP
                     EFDRDDRFDSVVCGMTLVFDPLKSPHYKLVCLRTYLNLVSGLIEVYSSETKSWVSSVK
                     HVPKTDCRLYFQSIAGVYWNGAIHWACRNWIIYLKINESRNGIISLPVPPYKFDQPWW
                     RSYPPLVESRDSLMLFDTFRSRGDDVDVYTLNTDYSGWSKKYHVNIVSDFATSVGEYL
                     GSSYVIHSFFPGVRDDDAFLVIETPSKAVIRYNFVSNTFQKLCDLDSST"
     misc_feature    37..144
                     /gene="LOC139841884"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(46..48,55..60,67..72,82..84,88..93,103..111,
                     115..117)
                     /gene="LOC139841884"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
ORIGIN      
        1 atgagtatga cgacttcttc agccgaatta gtttctcatg atgacatact gacacaaatt
       61 ttactcagat tacctattcg ttcaattgtt cgattcaaat gcgtatctaa tcattggcgg
      121 catctcctct caagtcctcg tttcgctctt cttcatcgaa attttaatgc taatcgtatg
      181 atcccatcag gtttatttat acgaaggaat atttgtttta gtagtaattt ttgggaagaa
      241 gaagagactt attatgtttt tgtttcgttg gatcctgaaa agcctgtcca acctcctttt
      301 aaatcgttag attatatgaa gtcctttgat cgtatgcagg atttgtttcc atccacacgt
      361 gcaggtatga ttaaagttat gcaatcttcg aatgggttat tgcttatacg cacccagaca
      421 gaggataatt attattatta tgtttacaat ccaaccatta atcaatgcac ggctgttcca
      481 gaatttgata gggatgaccg ctttgatagt gtagtttgcg gtatgacttt agtttttgat
      541 ccacttaaat ctcctcatta taaacttgta tgccttcgca cgtatttaaa tcttgtttct
      601 ggacttatag aggtttactc atccgaaact aagagttggg tgtcttctgt gaaacacgtt
      661 ccaaagactg actgcaggct gtatttccag agtatagctg gagtgtattg gaacggtgca
      721 attcattggg catgtcgtaa ctggattatt tatcttaaga tcaatgaaag tcgaaacggt
      781 ataatttctt tacctgtacc gccgtataag tttgatcaac catggtggcg ttcttatccg
      841 cctctggttg aatctcgtga ttctttaatg ttattcgata cttttcgttc ccgtggtgat
      901 gatgttgatg tttatacatt gaacacagac tactctggct ggtccaaaaa atatcatgtc
      961 aacattgttt ctgattttgc aacttctgta ggggagtatc taggttcttc atatgtaata
     1021 catagtttct ttccaggagt aagagatgat gacgcatttt tggtgataga aactccttcg
     1081 aaggctgtta taagatacaa ttttgtgtcc aacacttttc aaaagctttg tgatcttgac
     1141 tcatctactt ga
//
LOCUS       XM_071832076            1627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides anthranilate
            phosphoribosyltransferase, chloroplastic-like (LOC139841886), mRNA.
ACCESSION   XM_071832076
VERSION     XM_071832076.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1627
                     /gene="LOC139841886"
                     /note="anthranilate phosphoribosyltransferase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 10 Proteins"
                     /db_xref="GeneID:139841886"
     CDS             95..1303
                     /gene="LOC139841886"
                     /codon_start=1
                     /product="anthranilate phosphoribosyltransferase,
                     chloroplastic-like"
                     /protein_id="XP_071688177.1"
                     /db_xref="GeneID:139841886"
                     /translation="MASLQFQNPLLTSSSSYLFSKTQLPRNCFFNLNSNGGFGFNNLV
                     SSVYQNRFVPGSISKTTTFPQLIESLIERKNLTEAEAEESLDFLLHDGNESLISAFLV
                     LLRAKGETYEEVVGLARAMIKLCKKVEGLGDAVDIVGTGGDGANTVNISTGSSILAAA
                     CGARVAKQGNRSSSSACGSADVLEELGVAIELDPEGVKRCVEKAGIGFMMSPVYHPAM
                     QIVRPVRKQLKVKTVFNILGPMLNPAHVPFAVVGVYTEDLVHKMANALQRFGMKRALI
                     VHSEGLDEMSPLGPGLVLDVTQNSIKKFSFDPLDFGMPRCTVDDLRGGDSKYNAEMLR
                     RVLAGEKGSIADAFALNAAAALLVSGCVDSLREGVVVARETLESGKAIKTLDSWIDIS
                     QNSKNVEVMA"
     misc_feature    272..1300
                     /gene="LOC139841886"
                     /note="anthranilate phosphoribosyltransferase; Region:
                     PLN02641"
                     /db_xref="CDD:215345"
ORIGIN      
        1 accaacgcga tcatatttta caccaatcaa acttcttttt tagaatcaca tttaatttca
       61 atttgtatta tttcataaag atcggcaaca atcaatggct tcactacagt ttcaaaatcc
      121 acttctcaca tcatcaagtt catacctttt ttcaaaaacc caacttccaa gaaactgttt
      181 cttcaattta aactcaaacg gtggttttgg ttttaacaat ttggtatctt ctgtttatca
      241 aaatcgattt gttcccggtt caatctccaa aacgacaacg tttccacagt tgattgagtc
      301 attgattgaa agaaagaatt tgacagaagc agaggctgag gaatcacttg attttttgtt
      361 gcatgatgga aatgaatcat tgattagtgc ttttcttgtt cttttgagag ccaaaggtga
      421 aacatatgaa gaagtggtgg gattggctag agccatgatc aagctctgca agaaggtaga
      481 gggtttaggt gatgcagttg atatagttgg aactggcggt gatggtgcaa acactgtaaa
      541 tatctcaacc ggatcatcta tattggctgc cgcttgtgga gcaagagttg caaagcaagg
      601 aaataggtca agttcatctg catgtggaag tgctgatgta ctagaagaac ttggtgttgc
      661 aattgaatta gaccccgagg gggtcaaaag gtgtgtagaa aaggcaggaa ttggtttcat
      721 gatgtctcca gtatatcacc cagctatgca aattgttaga cctgttagga agcaactcaa
      781 agtgaaaacc gtgttcaaca tcctcggtcc aatgttaaat ccggcacatg ttccttttgc
      841 agttgtcggt gtctacacgg aagacctagt tcataaaatg gcaaatgcac tacaacgatt
      901 tggcatgaaa agagcactca ttgtccattc tgaaggcttg gatgaaatga gtcctcttgg
      961 gccggggctg gtccttgatg ttacccaaaa ttcaatcaag aagttctcat tcgatccatt
     1021 ggattttggg atgccacgtt gcacagtaga tgacttgcgt ggtggagatt ccaaatataa
     1081 tgcagaaatg ttgcgccgtg tattagcagg agaaaaagga tctatcgctg atgcatttgc
     1141 tcttaatgcg gcagctgcgt tgttggtcag tgggtgtgtg gacagtttac gggaaggagt
     1201 agttgtggcc cgtgagactt tagaatctgg aaaggcgatc aaaactctcg attcttggat
     1261 agatatatcc cagaactcaa agaatgttga agtgatggca tgaatttcag ttgtgcaata
     1321 atgaagttga atcaattaca ggaggtttga caatgcagaa aataatcctc aaatcagttg
     1381 caaggttctt tttcttataa gagtttatga tttatgaggt ggcttaagac atgttcatgg
     1441 agaaccctta acatagaaag tcatagaaac attgcgacta tatcatatgt ttttcttttt
     1501 aacaagagat ataatataat atattcatac aacttagcta taggcttgat ctttcttatt
     1561 taaccgatac catggtgtat tgatgatgtc tgaataataa aatgatgttt aactgcaatc
     1621 tgcaatc
//
LOCUS       XM_071832077             654 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At5g07610-like
            (LOC139841887), mRNA.
ACCESSION   XM_071832077
VERSION     XM_071832077.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..654
                     /gene="LOC139841887"
                     /note="F-box protein At5g07610-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841887"
     CDS             1..654
                     /gene="LOC139841887"
                     /codon_start=1
                     /product="F-box protein At5g07610-like"
                     /protein_id="XP_071688178.1"
                     /db_xref="GeneID:139841887"
                     /translation="MSLTTTSAELAPHDDILTQILLQLPVRSILLFKCVSKYWQYLLS
                     SPRFALLHRNLNVNLISPSSLFIRKSLSFWEEKSYYIIVSLDPEKPVKPPFKFLDFIK
                     SFDHMQEFPFTPEFDSVDGVPCGMTLVFDPLESPQYKLVCVRMYSDDVSGRIEVYSSE
                     SKSWVASANQINENHVRIIPLPLPWDTCHIYPTLYESRDSLLFFDKFYFWCTKGSIT"
     misc_feature    37..144
                     /gene="LOC139841887"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(37..39,43..51,58..63,70..72,103..111,115..117,
                     124..126)
                     /gene="LOC139841887"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(46..48,55..60,67..72,82..84,88..93,103..111,
                     115..117)
                     /gene="LOC139841887"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
ORIGIN      
        1 atgagtttaa cgactacttc agccgaatta gctcctcatg atgacatatt gacacaaatt
       61 ttactccaat taccggttcg atcaattctt ctattcaaat gtgtatctaa atattggcag
      121 tatctccttt caagtcctcg ttttgctctt cttcatcgaa accttaacgt taatcttatc
      181 tccccatcaa gtttatttat acgaaagagt ctgtcatttt gggaagaaaa gagttattat
      241 attattgttt cgctcgatcc tgagaagcct gtcaaacctc cttttaaatt cttagatttt
      301 attaagtcct ttgatcatat gcaggagttt ccatttacac cagaatttga tagtgttgat
      361 ggtgttcctt gcggtatgac tttagttttt gatccacttg aatctcctca atataaactt
      421 gtatgtgtcc gcatgtattc ggatgatgtt tctggacgta tagaggttta ctcatccgaa
      481 agtaagagtt gggtggcttc tgcaaatcag atcaatgaga atcatgtccg tataattcct
      541 ttacctctac cttgggatac gtgccatatt tatccgactc tatatgaatc tcgtgattct
      601 ttgttgtttt tcgataagtt ttatttttgg tgcactaagg ggagcatcac ctaa
//
LOCUS       XM_071832078             417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841888), mRNA.
ACCESSION   XM_071832078
VERSION     XM_071832078.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139841888"
                     /note="uncharacterized LOC139841888; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841888"
     CDS             1..417
                     /gene="LOC139841888"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688179.1"
                     /db_xref="GeneID:139841888"
                     /translation="MSLTWTVKPISKTQFEVMDTKKGGKVNLQEKTCTCKQWQLSGLP
                     CGHVMAVARYCNLRDVTFHVRNYFTTKTYKVAYIDDIQPLEYISEWVDPGKIPTVRPP
                     LLQKRQSGRPKSTARIPSKGEDKDDFKSNRKCSRCL"
     misc_feature    91..171
                     /gene="LOC139841888"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgtctctga cttggactgt taaaccgatt tctaaaacac aatttgaggt gatggatacg
       61 aaaaagggcg ggaaagtcaa tctacaagaa aaaacttgca cttgcaaaca gtggcagctt
      121 tctggtctac catgcggtca cgtaatggca gtagcaaggt attgtaacct acgtgacgtt
      181 acttttcacg ttcggaatta tttcaccact aaaacttaca aggttgctta catagatgat
      241 attcaaccac tagaatatat atctgaatgg gtggatccag gaaaaatacc aactgttcga
      301 cctccgttgc ttcaaaaaag acaatcaggt cgaccaaaaa gtactgctcg tataccatcc
      361 aaaggagaag acaaagacga tttcaaatct aacagaaaat gcagtcgttg cttgtaa
//
LOCUS       XM_071832079            1182 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841889), mRNA.
ACCESSION   XM_071832079
VERSION     XM_071832079.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1182
                     /gene="LOC139841889"
                     /note="uncharacterized LOC139841889; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841889"
     CDS             1..1182
                     /gene="LOC139841889"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688180.1"
                     /db_xref="GeneID:139841889"
                     /translation="MTIYETSDLVKLNQTFENKAAFLMALRTKCVTEGFQTKPKYSDK
                     GRYAANCISPNCAWHITARCIKDSNNFQVRDLNDLHTCSNTQFLPNNKHANKKVLGNI
                     LKEVMKQEGRVYRPYDIRNYMSAQFKISLSYHQVWKAKCYAIDMLRGSMEESFRILPL
                     YLHNLKLCNPGSVTNIRTDKENRLVMSYMSIGAAIRSFVHYGRPVIIVDGAHLKGGYL
                     GTNLIAVAIDANNGILPLAYGIGAGEATDHWTWFFGNLRDTLQSSRCCIKNLTIISNR
                     AVAIAVGISIVFLEVFHALCCRHLLGNLKTKSRRVKSYEWHYWKMCKAYRKSDFKYHY
                     KILRRRLPDSTKTLTDVGFNRWSRHHADHVRYAYLTSNSAESMNALSVHARKLPITVL
                     L"
     misc_feature    613..909
                     /gene="LOC139841889"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgacaatat atgaaacatc agatctagtt aaacttaatc agacattcga aaacaaagca
       61 gcattcctta tggcactacg aacaaagtgc gttactgaag ggttccagac taaaccaaag
      121 tactcagaca agggcaggta tgcagctaat tgtatatcac caaattgtgc atggcacata
      181 actgctaggt gtataaaaga cagcaataac tttcaagtac gagacctgaa tgatctccac
      241 acatgttcaa atacacaatt tctaccaaac aataagcatg ccaacaagaa ggtacttgga
      301 aacatactga aagaggtgat gaaacaagaa ggtcgtgtat atcggccata tgatataagg
      361 aattatatgt cagcacagtt taagataagt ctatcatacc accaagtgtg gaaagctaaa
      421 tgttatgcaa tcgatatgtt gagaggtagt atggaagaat catttcgaat actacctttg
      481 tatctacata atcttaaact gtgtaacccg gggagcgtaa ccaatattcg cactgacaag
      541 gaaaacagac ttgttatgag ttacatgtcc attggtgcag cgatacgttc gtttgttcac
      601 tatgggcgtc ctgtaatcat agttgatgga gctcatttaa aaggtggtta cttagggact
      661 aacttgattg ctgttgctat agatgctaat aatggaatcc taccattagc ctatggtatt
      721 ggggccggag aggcaactga tcattggacg tggttttttg gaaatctaag agacactcta
      781 cagtcttcca ggtgttgtat taagaatctt accattatat ctaacagggc agtagcaata
      841 gctgtaggta tatcaattgt ttttttagaa gtatttcatg cactatgttg tcgtcacttg
      901 cttgggaacc ttaaaacaaa atctagaagg gtcaaaagtt acgaatggca ctactggaag
      961 atgtgcaaag catataggaa atctgacttt aaataccact ataaaattct tcgtagacgt
     1021 cttccagatt caacaaaaac actcactgat gtgggattta atagatggtc taggcatcat
     1081 gcagatcatg ttcgctatgc ttacttaact agtaatagtg cagagtccat gaacgcacta
     1141 tcagttcatg ccaggaaact cccaattaca gtgctactat ag
//
LOCUS       XM_071832080             921 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841891), mRNA.
ACCESSION   XM_071832080
VERSION     XM_071832080.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..921
                     /gene="LOC139841891"
                     /note="uncharacterized LOC139841891; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841891"
     CDS             1..921
                     /gene="LOC139841891"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688181.1"
                     /db_xref="GeneID:139841891"
                     /translation="MGCAGAYCRKCSFVKTIGDGDTTSFWHEQWSGGGKLSILFLRLF
                     MLERDKDSTFKDRVQKNGSNLAFSWNWSREPTGRTRSELDRVVELLQSLNFDSSSTDS
                     WCWSFGSSSSRLFKVKDLSVAIDAKLLGNVSSTHPTFHNNFVPKKIEIFMWRALKKRL
                     PVRVELDKRGIDLDSIRCPLCDDDLESVDHSIIFCKYALDIWERLFRWWGLGSFSSYS
                     LPKIISEDSNISASTRGSKIWQVTKWVCAYFIWKNRNNKTFKGKCAIGPVTLSEIQVM
                     SFEWISKRSKLQNFDWLVWLSNPSHYLNTL"
     misc_feature    <421..603
                     /gene="LOC139841891"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggttgtg cgggggctta ttgtcggaag tgttcgtttg taaagaccat aggcgacggc
       61 gatactactt cgttttggca tgaacaatgg agtggagggg gcaaattatc tattttgttc
      121 ctaagactct ttatgttaga acgagacaaa gactctactt tcaaagatcg ggttcaaaaa
      181 aatggttcga atttagcttt ttcgtggaat tggtcgagag agccgacggg gcgtacaaga
      241 agtgagctgg atcgagttgt ggagctactg cagtcgctga attttgacag cagcagtacg
      301 gacagttggt gctggtcgtt tggttcgagt tcgagcaggt tgttcaaggt taaagatctc
      361 tcagtggcta tagatgctaa gctactaggt aacgtttcat ccactcatcc cactttccat
      421 aacaactttg tccctaaaaa aatagaaatc tttatgtgga gggcattaaa aaagcggttg
      481 ccggttcggg tcgagcttga caaaaggggt atcgatcttg actctattcg ttgcccccta
      541 tgtgatgacg accttgaatc ggttgatcac tccatcattt tttgcaagta cgccttagac
      601 atttgggaaa ggttgtttag gtggtggggt cttggtagct tttcatccta tagcttgccc
      661 aagattatta gtgaagactc caacatttcg gcttctacgc gtggttcaaa aatttggcaa
      721 gtaaccaagt gggtgtgtgc atattttatt tggaaaaacc gcaacaacaa gaccttcaaa
      781 ggaaagtgtg ctatcgggcc ggttacattg agcgaaatcc aagttatgtc tttcgagtgg
      841 atttccaaaa gatcaaagtt gcagaatttc gattggctcg tgtggctttc taatccaagt
      901 cattatctta acactttgta a
//
LOCUS       XM_071832081            1326 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841892), mRNA.
ACCESSION   XM_071832081
VERSION     XM_071832081.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1326
                     /gene="LOC139841892"
                     /note="uncharacterized LOC139841892; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841892"
     CDS             1..1326
                     /gene="LOC139841892"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688182.1"
                     /db_xref="GeneID:139841892"
                     /translation="MTQTLFSSTFNPGNDRPADKTYFEKYRVIRTTSKMETTEKVDHP
                     QSVKASNHVWELHTDGASSEEGVGAGLVLTSPEGEEHTYVLRFCFYAFNNEAEYEALL
                     FGIRIASEMGIKHLHAYVGSQIVAQQVNGGFEAKDISMKQYLQLVEKISKNFETLEVV
                     QIPRNKNKKTDVLSKLATLTFDHLHKKVLVEVLKDKSVDEKVVVATVEGREPCWITPY
                     VKYLQDGTLPTDAMEARRIRVSAPFYVLENGILYRKSFSGPNLRCLTPHQAIDVVKEM
                     HEGLCAQHSGYRTVVGRIMRQGSVAHPQANGQVEVTNKEIVAGIKARLGLSQTKWVDE
                     VPYVLWAYRTTPKRSTGETPFSLVYGTEAVIPAEIRVPTQRILAFDTENNSSILCENL
                     NLLEERRIMAAIRQANAKQKMAKYYNKRVRYVQFKEGDLVLRDNEASRQ"
     misc_feature    160..531
                     /gene="LOC139841892"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(175..186,274..282,289..291,361..363,481..483,
                     523..525)
                     /gene="LOC139841892"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgactcaga cgttattctc aagcacattc aatcctggta atgacagacc agccgataaa
       61 acatattttg agaaatacag agtcatcagg acgactagca aaatggaaac aacagaaaag
      121 gtcgaccatc cgcaaagcgt taaagccagc aatcatgttt gggaattgca cactgatggt
      181 gcatcaagtg aggaaggtgt tggtgcaggg ttagtactta ctagtccaga aggtgaagag
      241 catacgtatg tattgaggtt ttgtttctat gcatttaaca atgaagcaga atatgaagca
      301 ttgcttttcg gcatccgcat agcgtcagaa atgggaataa aacatttgca tgcatatgtt
      361 ggttctcaaa ttgtagcaca gcaggttaat ggagggtttg aagctaaaga tatctctatg
      421 aaacagtatt tgcaattagt tgagaaaatc tcaaaaaatt ttgagacctt agaggttgtg
      481 cagataccaa gaaataaaaa caagaagaca gatgttttga gcaaattagc aacattaaca
      541 tttgatcatt tgcataagaa agttttggtg gaggtcttaa aagataaatc ggttgatgaa
      601 aaggtagtgg ttgcaacagt tgaaggaagg gaaccatgtt ggataacccc ctatgtgaaa
      661 tatttgcagg acggaacact gccaacagat gccatggaag caagacgaat aagagttagt
      721 gccccatttt acgttctgga aaacggaata ctttatagaa aatccttcag tggaccaaat
      781 ttaaggtgtt taacaccaca tcaagcaatt gatgtagtca aggaaatgca tgaaggatta
      841 tgtgcacaac attccggtta tagaactgtg gttggacgga ttatgcgaca aggctcagtt
      901 gctcacccac aagccaatgg gcaagttgag gtaacaaaca aagaaattgt agccggcata
      961 aaggctaggt tgggtttgag tcagactaag tgggtagatg aagtgccata tgtattgtgg
     1021 gcttaccgca caacgccaaa acggagcacg ggtgaaacac cattcagttt ggtatatggc
     1081 accgaggcag tgataccagc tgaaatccgt gttccaacac aaaggatttt ggcatttgat
     1141 acagaaaata attcatccat cttatgtgaa aacttgaatt tattggaaga aaggcgaatc
     1201 atggctgcca tccgtcaagc gaatgcaaaa cagaaaatgg caaaatatta taacaaacga
     1261 gtcagatatg tgcaattcaa ggagggggat ttagtgttaa gagataatga ggcaagtagg
     1321 cagtaa
//
LOCUS       XM_071832082            1524 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides G-type lectin
            S-receptor-like serine/threonine-protein kinase LECRK3
            (LOC139841894), mRNA.
ACCESSION   XM_071832082
VERSION     XM_071832082.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1524
                     /gene="LOC139841894"
                     /note="G-type lectin S-receptor-like
                     serine/threonine-protein kinase LECRK3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 47 Proteins"
                     /db_xref="GeneID:139841894"
     CDS             1..1524
                     /gene="LOC139841894"
                     /codon_start=1
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase LECRK3"
                     /protein_id="XP_071688183.1"
                     /db_xref="GeneID:139841894"
                     /translation="MVPSGSKVELTNGSGLVLSDPEGKQVWTSGSISDLSYGFMNDTG
                     NFVIVGSDSRKIWESFNNPADTMLPTQVMDRGGVISSKMSKTNFSTGKFQLRLLPDGN
                     LVLNSLDIFSGDADDAYYMTGTNDASDSTNSGYQYIFNATGYLYILRSNGEIYDVTPR
                     DSLPSGDYYHRATLDSDGVFTQYYYPKKFTGDILWKVIWFVPENICGEDGSSACGLNN
                     VCSLENNRIKCECPPGFTLLDSNIPMGDCKPDFVPSCDGDYGEEQFDFIELPNIDWPK
                     SDYVRMNPSNEEACKSSYLKDCFCAVTVFRDGQCWKKQIPLSNGRKESSVYVKAFLKF
                     RKGNHSLQSYPELLRENKNQRSLILLGSALLSTSAFVIILLTSVIYDGFIRVQQKKSQ
                     NPISSSKAVEASLPRITYQELVKATNGFKDELGKGAFGAVYKGVLGTKTITVKKLHSL
                     IQDVQKEFKTEVNTIARTNHKNLVQLLGYCDEGEQRLLIYEYMSNGTLASFLFEKDT"
     misc_feature    7..207
                     /gene="LOC139841894"
                     /note="Bulb-type mannose-specific lectin. The domain
                     contains a three-fold internal repeat (beta-prism
                     architecture). The consensus sequence motif QXDXNXVXY is
                     involved in alpha-D-mannose recognition. Lectins are
                     carbohydrate-binding proteins which specifically...;
                     Region: B_lectin; cl24013"
                     /db_xref="CDD:474126"
     misc_feature    <448..705
                     /gene="LOC139841894"
                     /note="S-locus glycoprotein domain; Region:
                     S_locus_glycop; pfam00954"
                     /db_xref="CDD:395761"
     misc_feature    751..999
                     /gene="LOC139841894"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; Region:
                     PAN_AP_plant; cd01098"
                     /db_xref="CDD:238531"
     misc_feature    order(823..825,829..831,877..879)
                     /gene="LOC139841894"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     misc_feature    1270..>1518
                     /gene="LOC139841894"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atggtcccta gtggctcgaa agtcgagtta acaaatggga gtgggctcgt acttagtgat
       61 cccgaaggaa aacaggtttg gacttcaggg tccatatccg acctttctta tggttttatg
      121 aacgataccg gcaactttgt gattgtcggt agcgattcac gcaagatatg ggagagtttt
      181 aataatccgg cagataccat gttgcctact caggttatgg acagaggagg agtgattagt
      241 tcaaagatga gcaaaacaaa cttctcaact ggcaaatttc agttacgttt gcttccagat
      301 gggaatcttg ttcttaattc tctcgatatt ttttctggtg atgctgatga tgcttactat
      361 atgactggta ctaatgatgc ctccgattca accaattctg gttaccaata tatttttaat
      421 gccacgggat acttgtatat attaagaagt aacggtgaaa tatatgatgt tactccaaga
      481 gattcacttc cttctggaga ttattatcat agagctactc ttgattctga tggagttttt
      541 acccaatatt attaccctaa aaaatttact ggcgatattc tctggaaagt tatatggttt
      601 gttccggaaa atatatgtgg agaagatggt agcagtgctt gtggactaaa taatgtttgc
      661 agccttgaaa ataaccggat aaaatgtgaa tgcccaccgg ggtttacatt gctcgattct
      721 aatatcccga tgggtgactg caagcctgat tttgttccga gctgtgatgg agattatggg
      781 gaagagcaat ttgatttcat tgagctccct aatattgatt ggcctaaatc tgattatgtg
      841 cgcatgaacc catctaacga agaagcctgc aaaagttctt atttgaaaga ttgtttctgt
      901 gctgttacag ttttcaggga cggtcaatgt tggaagaagc aaattccact ttccaatgga
      961 aggaaggaat cttcagttta tgtgaaggca tttttgaaat ttagaaaagg taatcattct
     1021 cttcaaagct atcctgaatt attaagagaa aataaaaatc agagaagttt gatattactc
     1081 ggatcagccc tgttaagcac atctgctttt gtaatcatat tattaactag tgtgatttat
     1141 gacggattta ttcgagtcca acaaaagaaa tcacaaaatc caatctcaag tagtaaagct
     1201 gtcgaagcca gtctgccacg tattacatat caagagctag tcaaagctac taacgggttt
     1261 aaagatgaac tgggaaaggg agctttcggg gcagtttata aaggtgtatt agggacaaaa
     1321 accataactg ttaaaaagtt gcattctttg attcaggatg tacaaaagga atttaaaaca
     1381 gaggtgaaca caatagcaag gactaatcac aaaaatttgg tgcagcttct tggatattgt
     1441 gatgaaggtg agcagaggct actgatttac gagtacatga gcaacggaac cctagcgagc
     1501 tttttatttg aaaaagatac atga
//
LOCUS       XM_071832084             510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841897), mRNA.
ACCESSION   XM_071832084
VERSION     XM_071832084.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..510
                     /gene="LOC139841897"
                     /note="uncharacterized LOC139841897; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841897"
     CDS             1..510
                     /gene="LOC139841897"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688185.1"
                     /db_xref="GeneID:139841897"
                     /translation="MPNYGKFLKTLMSKKGDVEQVSTAFLKKECDGILKKCNLPPKIG
                     DCGHFLIPCNVNGSEMLTSLADSGASINFMPYSIYKRLGFGDLSPTTMGVKLIDQSIS
                     SSVGIAEDLIVKVRDMEFPIDFVIVDIKKDPLVPLVLGRPFLETADSFFDFRTVKLTL
                     RDKGKCKSI"
     misc_feature    151..435
                     /gene="LOC139841897"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(196..198,202..204,208..210,280..288,412..414)
                     /gene="LOC139841897"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    196..204
                     /gene="LOC139841897"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    196..198
                     /gene="LOC139841897"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(280..291,301..312)
                     /gene="LOC139841897"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcccaatt atgggaaatt tttgaagaca cttatgtcca aaaaaggaga tgttgagcaa
       61 gtatccaccg ctttcttgaa aaaggagtgt gatgggattt taaaaaaatg taacctacca
      121 ccaaaaatag gtgattgcgg acatttcctt atcccatgta atgtgaacgg gtcggagatg
      181 cttacatctt tagccgactc gggggcaagt atcaacttca tgccctactc aatttacaaa
      241 aggttaggct ttggtgacct ttcgcccact acaatgggag taaaattaat tgatcaatca
      301 attagctcta gtgtggggat tgccgaagac ttaattgtta aggtgaggga catggaattt
      361 ccaattgatt ttgtcattgt cgatataaag aaagacccgc ttgtacccct tgttttggga
      421 aggccatttt tggaaaccgc ggattctttc tttgacttta gaaccgtgaa attgactctt
      481 agagacaagg ggaaatgcaa gagcatatga
//
LOCUS       XM_071832085             687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841898), mRNA.
ACCESSION   XM_071832085
VERSION     XM_071832085.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..687
                     /gene="LOC139841898"
                     /note="uncharacterized LOC139841898; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841898"
     CDS             1..687
                     /gene="LOC139841898"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688186.1"
                     /db_xref="GeneID:139841898"
                     /translation="MPIYFVSKALSGSELNYLPIEKLVYALVVTSRRLRRYFQAHQIM
                     VLTDQPIRQLLYKPEISGRLTKWAIELGKHEIAYCARSAIKGQVMADYLAETAADMPV
                     IFDPEQLLAPSPEIWELYTDGAASFESTGAGLILTCPHREVHTYALRFNFKVTNNEAK
                     YEALLVGMRIARELGVRKLQAYVDSQLVPNLINGKFDANDKSMQSYLALIHSLADTFI
                     DFRISQIPRS"
     misc_feature    <4..213
                     /gene="LOC139841898"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    349..684
                     /gene="LOC139841898"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(364..375,463..471,478..480,550..552,670..672)
                     /gene="LOC139841898"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgccaatat atttcgtcag caaagcatta tcaggaagtg agttgaacta tctccccata
       61 gaaaaactcg tatacgcgct tgtcgttact tcccgtcgtt tacgcaggta cttccaagcg
      121 catcagatta tggtactcac tgaccaacct attcgacaac tactctacaa gccagaaata
      181 tccgggaggc taactaaatg ggcaatagag ctaggcaagc atgaaatcgc gtactgtgcc
      241 agaagcgcta tcaagggaca agtgatggct gattatctgg ccgaaacagc cgctgacatg
      301 ccagtaatct tcgaccctga acaactcctc gcgccttccc cagaaatttg ggagctctat
      361 accgatggag cagcaagctt tgagagcact ggtgcaggtt taattcttac atgtccgcat
      421 cgagaagtgc atacatacgc gctgcggttc aactttaagg taacaaacaa cgaggcaaaa
      481 tatgaagcgc tactagtagg gatgcgtata gcccgagagt tgggagtaag gaagctacaa
      541 gcctacgtgg attcacaatt agtccctaat ttgataaatg gcaagttcga cgccaacgat
      601 aaatctatgc aatcatatct ggccctgatc cactctctag ctgatacatt cattgacttc
      661 aggatcagtc aaatccctag gagttag
//
LOCUS       XM_071832086             312 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841899), mRNA.
ACCESSION   XM_071832086
VERSION     XM_071832086.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..312
                     /gene="LOC139841899"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139841899"
     CDS             1..312
                     /gene="LOC139841899"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688187.1"
                     /db_xref="GeneID:139841899"
                     /translation="MTTPMEPNLKIKKDQGKKLKDVKLFRQMVGSLIYLTITRPKIAY
                     SVGIVSQFMQCPTNVHLDAAKRILRYVKGSIGHGLCKKQDVVALSSTEAEYIAATMAA
                     Q"
     misc_feature    223..>309
                     /gene="LOC139841899"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgactactc caatggaacc aaacctcaaa ataaagaaag atcaaggaaa aaagctcaag
       61 gatgtgaagt tgttccgaca aatggttgga agtttgatct atctaaccat cacaaggccg
      121 aaaattgctt actcggttgg cattgtttca caatttatgc aatgtccaac aaatgttcat
      181 cttgatgcag caaaaaggat ccttcgttat gtgaaaggat caataggtca tggcttgtgc
      241 aagaagcaag atgttgttgc tttatctagc acagaagcgg aatacatagc tgcaactatg
      301 gcggctcaat aa
//
LOCUS       XM_071832087            2190 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841900), mRNA.
ACCESSION   XM_071832087
VERSION     XM_071832087.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2190
                     /gene="LOC139841900"
                     /note="uncharacterized LOC139841900; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841900"
     CDS             1..2190
                     /gene="LOC139841900"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688188.1"
                     /db_xref="GeneID:139841900"
                     /translation="MTRENVDKLIYYCDLAWYKEVEDMQSKPMVWIGVYVAAASILCS
                     IAMGADLLHGFRNRKLWFPSKYFTLDAASITVITVAMKLPVDLNTFMPGYLDQVTKLG
                     SMAFMCTMMANIMPSLASMNNKTLLANVIGLVILVITIVVNICIEISTGVIQTTNIYV
                     ILIAAYIYLAMLLWLLIIIISSAIMIPSTKQILEFKYQVACKRTLDDQNNLMAMVENL
                     RQYVRKYWVMAESGSPQFVLASNRLSSTSAIICVIILLIELLLCISLQFELRDTGETI
                     SSEWGSDYNWSVFSIFISQLIGIVVGTIAPIFRCFTIMNFNLFTNKNHFVIFKVEKYW
                     FQQLCEWKESHIIFLSSGSWSLTFLRNLKNLFLELCIRIQKVIVVSSKMIGLIPIVIS
                     ILIMYILRTWKSLVAMLFKLPPFKEDDDINSDLSDYVLQLEDDMKLSNQTLKRISNAI
                     NKFIQDAEKEQNKDLLVFLHPSTGFKGVESFDSDQVEALTSVKLVNSWSLPVVTLTCI
                     AISLPNISNVAVHRLLDNVRESLRYTSLVEETVNNTREYSNILKATTTLWYEVEEKRM
                     WLENTIKKGAFGGKTPIEVLEWFAVKAKTIVSENETTNGEVMVNNPKNLILANSMYRN
                     AQTILFNYQANVEMINEDIKLFELLSSMISDILSACFTNIRRVIEMKCRESVIEKRES
                     SVMDAAKLFGRTQEILKRVEGWELPSMDSGKMGFIDEWRLHLKRTIP"
ORIGIN      
        1 atgacacgag agaatgtgga caaattgata tattattgtg atctggcatg gtataaggaa
       61 gttgaagaca tgcaaagcaa acctatggtg tggattggcg tctatgtagc tgcagcatca
      121 attctgtgca gcattgctat gggtgctgat ttgttgcacg gttttagaaa taggaaattg
      181 tggtttccat ctaaatattt cacactcgat gcagcatcta tcacagtgat tactgtcgcc
      241 atgaaattac ctgtggatct gaatactttc atgcctggat acttagatca agtaaccaag
      301 ttgggaagca tggccttcat gtgtacgatg atggcaaaca taatgccttc tttggcgtct
      361 atgaacaaca agacacttct tgcaaacgtc ataggtttgg ttattctcgt tatcactatt
      421 gttgtcaata tttgcatcga gattagtacc ggtgttatac aaactaccaa tatatatgtg
      481 atcttgatag cagcatacat ctatctggct atgttactgt ggttactaat aatcataatt
      541 tcttcagcta taatgattcc ttctactaag caaattttag aattcaaata ccaagtcgca
      601 tgcaagagaa ctctagacga tcaaaataac ttaatggcta tggttgaaaa tctcaggcaa
      661 tatgttagaa aatattgggt tatggctgaa agtggcagcc ctcaatttgt gttggctagt
      721 aatcggttat cctctacttc tgccataatt tgtgtaatta ttctactcat tgaactattg
      781 ctatgtatat cattgcaatt tgaattacgg gatactggcg aaacaatatc ttctgagtgg
      841 gggtcagatt acaactggtc agtgttttcc atctttatat cacagttgat tgggatcgta
      901 gttggtacca ttgctccaat atttcgatgt tttacaataa tgaacttcaa tttgttcact
      961 aataaaaatc attttgtgat cttcaaagta gaaaagtact ggttccagca gttgtgtgag
     1021 tggaaagaaa gccatataat ttttctatca agtggttctt ggtcattaac ttttctacgt
     1081 aatttgaaaa acctcttttt agaactttgc attcgcatcc aaaaggttat tgttgtatca
     1141 agcaagatga ttgggcttat tccgatagtc atttcaatct taatcatgta tattttacgt
     1201 acttggaagt cattggtggc aatgttgttt aagctacccc catttaaaga agatgatgac
     1261 atcaacagtg acctaagtga ttacgtattg caacttgaag atgatatgaa gcttagcaat
     1321 cagacactga aacgcatttc aaacgccatc aataagttta tccaagacgc agagaaggaa
     1381 caaaataagg atcttttagt gtttctacat ccttctaccg gatttaaggg agtagagagt
     1441 tttgatagcg atcaagttga agcgctaact tccgttaaac ttgttaacag ttggagctta
     1501 ccggttgtaa ctttgacatg catcgccatt tctctcccta atatttctaa tgttgcagtt
     1561 cataggttgc tcgataatgt tcgcgaaagt cttcggtata ctagtctcgt ggaggaaacc
     1621 gtgaataata cacgcgaata ttcaaatata ttaaaggcaa ctacgacctt gtggtatgag
     1681 gttgaagaga agcgcatgtg gttggaaaac actatcaaaa agggtgcttt tggaggaaaa
     1741 acaccgatag aagttcttga atggtttgct gttaaagcta aaacaattgt ttcagaaaac
     1801 gagactacga atggagaagt aatggtgaac aatccaaaga acttgattct tgctaattca
     1861 atgtatcgta atgcacaaac aatattgttc aactaccaag cgaatgttga aatgattaat
     1921 gaagacataa agttgtttga gcttttatca agcatgattt ccgacatatt atctgcttgc
     1981 ttcaccaaca tacgacgagt catagagatg aagtgtcgtg aaagtgtcat agagaaacgg
     2041 gagagtagtg tcatggatgc cgctaaattg tttggtagaa ctcaagagat actaaaaaga
     2101 gttgaagggt gggagttacc aagtatggat tctggaaaaa tgggatttat tgatgagtgg
     2161 cgtcttcatt tgaagcgaac gattccttaa
//
LOCUS       XM_071832088            1689 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841901), mRNA.
ACCESSION   XM_071832088
VERSION     XM_071832088.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1689
                     /gene="LOC139841901"
                     /note="uncharacterized LOC139841901; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 27
                     Proteins"
                     /db_xref="GeneID:139841901"
     CDS             1..1689
                     /gene="LOC139841901"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688189.1"
                     /db_xref="GeneID:139841901"
                     /translation="MKADRAYCLCCYLFRDHIGHQGGSEAFVTDEFNNWKKTERLKEH
                     VGHVNSFHNKALQKCESLKKPNESIVNAFHKQDEKSKKENRMRLSATISACRYCLNWA
                     LPFRGHDESETSMYKGNFLELMDFILFHNEELRNLPKAPGNNKLISSYIQKDIVKCFK
                     QEVLDCIFIDIGDDVFVLLVDESSDVSKKEQMATVLRYINAQGLVKERFVGLVHVKDT
                     SSLSLKSSIDSFFFKHKVSMQKLRGQGYDGASNMRGEFNGLKEKILEENESAYYVHCF
                     AHQLQLVVVAVARKHLAIVNFFDKIAVLMNVVCASCKRKDILLDTEKKRVEEQIGSGI
                     LETGRGLNQELSLIRPGDTRWNSHYNTLVRLVDMFPSVIKVLQFVKEEGNNASSQNQA
                     IGLLKYLKSFDFVFNLHLMLRILGLTNVLSKALQRKDQDILEAVQLVESTKAKLQELR
                     TSGFGIVLKKATSFCEEHDIRILKMDEDCINTRRQREKITNQHYYEIECFNTVLDMQI
                     QEFGDRFSETSTELLFCMSALSPRDSFSMFNSSKLRRLCELYPKDFNSTDMIEL"
     misc_feature    76..774
                     /gene="LOC139841901"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atgaaggcgg atagagcata ttgtttgtgt tgctacttat ttagagatca tattggccac
       61 caaggtggta gtgaggcatt tgtaacggac gagttcaata attggaaaaa gaccgagaga
      121 cttaaagagc atgttggaca tgtaaatagc tttcataata aagcactaca aaagtgcgaa
      181 tctttaaaga aaccaaatga atctattgtc aacgcttttc ataagcaaga tgaaaaatca
      241 aaaaaagaga atcgaatgcg gttgagtgct acgatttctg cttgtaggta ttgtttgaac
      301 tgggcactac cattccgtgg tcatgatgag tcggaaacat ctatgtataa gggaaatttc
      361 ttggaattga tggactttat cttatttcac aatgaggaac tccgtaatct accgaaagct
      421 ccggggaata acaaattgat ttcttcttat attcaaaaag atattgttaa gtgctttaaa
      481 caagaagtac ttgattgtat ctttatagat attggtgatg atgtgtttgt gttattagtt
      541 gacgagtcta gcgatgtatc taaaaaggaa caaatggcta ctgtgttacg atatattaat
      601 gcacaaggac ttgttaaaga gagatttgtg ggccttgttc atgtaaagga tacatcctct
      661 ttgtctctta aatcttccat tgattctttt tttttcaaac ataaagtgag catgcaaaaa
      721 ttgagaggtc aaggttatga tggagcaagc aacatgcgag gcgagtttaa tggtttaaaa
      781 gaaaaaatct tggaggaaaa tgaatcggca tattatgtac attgttttgc tcatcaacta
      841 caattagtgg ttgtagcggt tgcaaggaaa catttggcaa tagtgaactt ctttgacaag
      901 atagccgttt taatgaatgt tgtttgtgct tcttgtaaaa gaaaagatat cttgcttgac
      961 acggagaaaa agagggtaga agaacaaatt ggtagtggta tacttgaaac cggaagagga
     1021 ttgaatcaag agctttctct tatacggccc ggagatacac gatggaattc tcactataat
     1081 acacttgtgc gtttggttga tatgtttcca tctgttatta aggtccttca atttgttaaa
     1141 gaagaaggaa ataacgcttc tagccaaaat caagcgattg gtcttttgaa atatttaaag
     1201 tcatttgatt ttgtttttaa tttgcatcta atgttgcgca ttttagggtt gacaaatgta
     1261 ttatcgaaag cccttcaaag aaaagatcaa gacattttag aagcggttca attagtggag
     1321 tcaaccaaag caaaattaca agagttaaga acaagtgggt ttggaattgt tttaaagaaa
     1381 gcgacgtctt tttgtgagga acatgacatc cgaattttga aaatggatga agattgtatt
     1441 aatacaagga gacaaaggga aaagattact aatcaacatt attatgagat agagtgtttt
     1501 aacaccgttt tggatatgca aattcaagag tttggtgatc gttttagtga aactagtacc
     1561 gagttgcttt tttgtatgtc ggcgttgagt ccacgtgatt cattctcgat gtttaattct
     1621 tcaaaactaa gaaggttgtg tgagttatat ccaaaagatt ttaatagtac agatatgatt
     1681 gaactttag
//
LOCUS       XM_071832089            1173 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139841902), mRNA.
ACCESSION   XM_071832089
VERSION     XM_071832089.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1173
                     /gene="LOC139841902"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841902"
     CDS             1..1173
                     /gene="LOC139841902"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688190.1"
                     /db_xref="GeneID:139841902"
                     /translation="MGFRDTKHPDHVCLLKKSLYGLKQAPRAWHQRFADFVSTIGFVH
                     SKCNHSLFIYHKDNEISYLLLYVDDIILTTNTSKLRNSLMELLAKEFAMKDLGPLGSF
                     LGITVTRSSNGLFLDQQAYARDIIQRADLVHCNPVSTPVDTNGKQSNEVGKPYSNPTE
                     YRSLAGALQYLTFTRPDITYDVQQVCLHMHAPHDAHMLALKRIIRYIKGTLSLGLHIS
                     KGSSNSLYSYTDADWAGCPDTRRSTSGYCVYLGDNLISWSSKRQAIVSRSSAEAEYRG
                     VANVVAKTCWLRNLLLELHNPLSKATLVFCDKVSAVYLSGNPVQHQRTKHIELDIHFV
                     REKVARGQVRVLHVPTRFQIADIFTKGLPRVLFEEFRYSLCIRDSNASTEGEYKST"
     misc_feature    <4..423
                     /gene="LOC139841902"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    682..1092
                     /gene="LOC139841902"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(688..699,802..810,817..819,919..921,997..999,
                     1078..1080)
                     /gene="LOC139841902"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggggtttc gagatactaa acatcctgat cacgtatgtc tcttaaagaa atctctctat
       61 ggcttaaagc aagctcctag agcttggcac caacgctttg ctgattttgt ctctacgatt
      121 ggctttgttc atagcaaatg caatcattcg ttattcattt atcacaaaga taatgaaatt
      181 tcatatctac ttctttacgt ggatgacatt attttaacca ctaacacttc caagttacga
      241 aattcactca tggaattatt agccaaagaa tttgctatga aagatttagg tccactcggc
      301 tcatttcttg gcattacagt gacccgtagc tctaatggct tgtttctcga tcaacaagca
      361 tacgcacgtg acatcattca gcgtgcggat ctcgtacatt gcaatcctgt tagtacccct
      421 gttgacacta atgggaaaca aagtaatgaa gttggcaaac catattctaa tcctacagaa
      481 tatcgtagtc tcgccggtgc acttcaatac cttacattta cgcgccccga catcacttat
      541 gatgtacaac aagtgtgcct ccatatgcat gctccacatg atgcacacat gcttgccttg
      601 aaacgcatca tacgatacat taaaggcact ttatctctcg ggttacatat ctcaaagggt
      661 tcctcaaact ctctttactc atataccgat gcggattggg ctggttgccc ggatacccga
      721 cgatctactt ccgggtactg tgtctacctg ggtgataact taatttcttg gtcttccaaa
      781 cgacaggcta ttgtttctag atcaagtgct gaagctgaat acaggggtgt tgccaatgtc
      841 gttgccaaaa cttgttggtt acgaaatctg ttgctcgaac tacataatcc actttcaaaa
      901 gcaactctag ttttttgtga taaagtgagc gccgtttatt tatccggtaa tcctgttcag
      961 catcaacgaa ccaaacacat cgagttggac attcattttg ttcgggagaa agtggcacgg
     1021 ggacaagttc gcgtgttaca tgttccaacg cgttttcaaa ttgccgatat ttttaccaag
     1081 ggccttccac gtgtcttatt tgaagaattc agatacagcc tttgcattcg ggactcaaat
     1141 gcttcgactg agggggagta taagtcaaca tag
//
LOCUS       XM_071832090            2907 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841903), mRNA.
ACCESSION   XM_071832090
VERSION     XM_071832090.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2907
                     /gene="LOC139841903"
                     /note="uncharacterized LOC139841903; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139841903"
     CDS             1..2907
                     /gene="LOC139841903"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688191.1"
                     /db_xref="GeneID:139841903"
                     /translation="MKVITVNIRSFGGSSGKGRVGWFRKMRLKEKPDVVLIQETKCKV
                     VKDEWIERVWGSADFMFVQKPMIGKSGGMLTIWDPKAFIINEAVEKQYYISIKGKWVG
                     KEHDTIIVNVYGPHKDEEKRKLFESLEELLKCPNDEWILGGDFNEVRPKEERQNSQFI
                     ESRAKRYNSFIEKSHLLEIPLVGRRFTRICDNGLKFSKLDRFLVNDQFLHVWGDVTVI
                     ALDRGTSDHCPIAIRNSYTDFGPKPFKVFDLWLDSKEAEKVVIEAWNMQVSGKRDNCN
                     FRDKLKNVKMALREWTKRKYGCIDQEIEFLKKKQRLSRLKQTLEDLKKALDWFWGKET
                     LSRGCNASFMTLIPKKSTPMNLGEYRPISLIGSLYKILAKILSKRLQRVIHKVISVEQ
                     SAFMKGRFILDGILVAYEVIGEVKRKKEKCMIFKADVEKAFDSINHNFLSKILEIMGF
                     GVKWRNWISSCLSSASVSILVNGSPTDEFALRRGIRQGDPLSPYLFIIVAEGLNAMIK
                     QALQVNLIKGIEVGKDRVIISHLQYADDTTIFGEWNRKNISNVFKVLKCFEIFSGLKV
                     NVSKSCLFGVGVSSNMVEAMASRFRCQVGVFPFMYLGLPIGCKMKNIKEWEPYIDKFH
                     KRLDSWKAKLMSFGGRLTLIKSVLSSLPLYDFSLFRAPSSVINKLEGLRRLFFWGGSG
                     ESKKLSWVKWEDVLCPFEGGGLNIGSLRAKNLALLAKWWWRFLNDKHSLWSKTISSLY
                     GRDGGLGNHSSIGSGKGAIWKNISKARIIVDNLDIHFTNSFVKVVCKGDECLFWHDKW
                     LDGYRLKDKFGRLYNLDRNKDALVKNRCVKDESGNCSFSWDCLRNPRGRAAGDLQNLC
                     NLVQDFKFAEGSSDKWACNLLQNGSFTVLHLSKLIDEKLLGPRTGAEYTDRVNIIPKK
                     IGLLVWRAKLNRIPVRVELDKRWIDLDSVRCPVCDKDIETVEHIFIQCDFAKDL"
     misc_feature    7..699
                     /gene="LOC139841903"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,115..117,337..339,430..432,436..438,598..600,
                     676..681)
                     /gene="LOC139841903"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(115..117,676..678)
                     /gene="LOC139841903"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(337..339,436..438,679..681)
                     /gene="LOC139841903"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    1033..1818
                     /gene="LOC139841903"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1282..1299,1459..1464,1597..1599,1603..1608,
                     1804..1809)
                     /gene="LOC139841903"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1282..1299,1459..1461,1603..1605)
                     /gene="LOC139841903"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1462..1464
                     /gene="LOC139841903"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <2725..2904
                     /gene="LOC139841903"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaaggtaa taactgtaaa cattcgcagt ttcgggggtt ctagtggaaa gggtagggta
       61 ggatggttca gaaagatgcg tttaaaggaa aagccggatg tagtgttgat ccaggaaaca
      121 aagtgtaagg tagtgaagga tgagtggata gaaagggtat gggggtcggc tgacttcatg
      181 tttgttcaga aaccaatgat tggaaagtct ggaggtatgt taactatttg ggatccaaaa
      241 gctttcatta ttaatgaagc ggttgagaaa caatattata tctccataaa aggaaaatgg
      301 gtgggaaaag agcacgacac catcattgtc aatgtgtatg gaccccacaa agatgaggag
      361 aaaaggaaat tgtttgagtc gttagaagaa cttttaaaat gtccgaatga tgaatggatc
      421 cttgggggtg acttcaacga ggtaagaccg aaagaagaaa ggcagaatag tcaattcatc
      481 gagagtagag caaaaaggta caatagtttc attgaaaaat cacatcttct tgaaatccct
      541 ctagtcggca gaaggttcac aaggatatgc gataatggac tgaagttcag taaattagat
      601 cgattcctag tcaatgatca attcctacat gtttggggag atgtcacggt gatagcttta
      661 gatcggggca cgtcagatca ctgtcccata gctattagaa actcgtacac tgattttggg
      721 ccaaagcctt ttaaagtttt cgatctgtgg ctagactcta aggaagctga aaaggtggtg
      781 attgaagcgt ggaatatgca agtaagtggt aaacgggata attgcaactt tcgtgataaa
      841 ctaaagaatg tcaagatggc tttaagagag tggactaaac gaaaatatgg gtgcatcgat
      901 caggaaatcg aatttttaaa aaagaaacag aggctttcga gattaaagca gacgctggag
      961 gatttgaaaa aggcgttgga ttggttttgg ggtaaagaaa ccctctctcg agggtgcaac
     1021 gcgagtttta tgacattaat ccctaaaaaa tcaactccaa tgaacctcgg tgaatatcga
     1081 cccattagcc taatcggaag tctttataag atcttagcaa aaattctatc aaaaagactt
     1141 caaagagtaa ttcacaaggt cattagtgtg gaacaaagcg cgtttatgaa ggggagattt
     1201 atcttagacg gtattctagt ggcatatgaa gtgatcggtg aggtaaaaag gaaaaaagaa
     1261 aagtgtatga tctttaaggc cgacgttgaa aaagcgttcg atagcatcaa tcataatttt
     1321 ctctcgaaaa tcttagaaat aatgggtttc ggggtgaagt ggcgtaattg gataagttcg
     1381 tgcctttcct cggcgtcggt ctcgattctt gtaaacgggt ctccaaccga tgaatttgct
     1441 cttcgaaggg ggattcgtca aggagatcct ctatctcctt acttatttat tattgtggcg
     1501 gaaggactta acgcaatgat aaaacaagca ctccaagtga atttaatcaa aggtattgag
     1561 gtaggaaagg atcgagtaat catatcacac ctacaatatg ccgacgatac cacgatattt
     1621 ggtgaatgga atagaaagaa tattagtaat gtgtttaagg tccttaaatg ctttgagatc
     1681 ttttcggggc taaaagtaaa tgtttcaaaa agttgtttgt tcggagtagg tgttagctcg
     1741 aacatggtag aagccatggc gagtagattc agatgccaag ttggagtatt cccgtttatg
     1801 tacctagggc tccctatcgg gtgcaaaatg aaaaacatca aagaatggga gccgtacatc
     1861 gataaattcc ataagaggct agatagttgg aaagcaaagt tgatgtcatt tgggggtcgt
     1921 ctaacgctca tcaaatcggt ccttagtagc ctcccgttgt acgatttctc tcttttccgt
     1981 gctccgtcaa gcgtcatcaa caagctcgaa ggtttgcgtc gtttattttt ttggggcggg
     2041 tcgggagagt caaaaaaact ttcgtgggta aaatgggaag atgtattgtg tccttttgag
     2101 ggaggggggt taaacattgg gtccttgaga gcaaaaaatc ttgcactact agcaaaatgg
     2161 tggtggagat ttttaaatga taaacactca ctttggtcga aaactatttc aagtctttat
     2221 gggcgggatg gggggttggg gaatcattca agcatcgggt caggaaaggg ggcgatttgg
     2281 aagaatataa gcaaagccag gattatcgtt gataatctcg acattcactt tactaactcg
     2341 tttgtgaagg ttgtttgtaa aggggacgaa tgtctttttt ggcacgacaa gtggttggat
     2401 ggctatcgtc ttaaagacaa atttggaagg ctatacaact tggatcgaaa caaagacgca
     2461 ctagtcaaga atagatgtgt taaagatgag tctgggaact gtagtttttc gtgggattgc
     2521 ttgagaaacc cgagaggaag ggcggcagga gatctccaaa atctatgcaa tttggttcaa
     2581 gactttaaat tcgcagaggg ttcgagtgac aaatgggcgt gtaatcttct tcaaaatggc
     2641 agcttcacgg ttcttcatct ttcaaaattg atcgacgaga agctcctagg gccacgtaca
     2701 ggggctgaat acacggatcg agtcaatatc attccaaaga aaatagggtt attagtgtgg
     2761 agggcgaaac tgaatagaat tccggtaaga gttgagcttg ataaaagatg gattgatttg
     2821 gattctgtta gatgccccgt atgtgacaaa gacattgaaa cggtggaaca tattttcatt
     2881 cagtgtgact tcgcgaagga tctttag
//
LOCUS       XM_071832091             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841904), mRNA.
ACCESSION   XM_071832091
VERSION     XM_071832091.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139841904"
                     /note="uncharacterized LOC139841904; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841904"
     CDS             1..567
                     /gene="LOC139841904"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688192.1"
                     /db_xref="GeneID:139841904"
                     /translation="MTPYEMLYGPKCRTPTCWLEAGEKQFVGPELVRITAEKVVIARE
                     KLKAARDRQKMYADPRRRLVNFEVGDRVYLKVSPWKGVIRFGKWGKLAPRYIKPFKII
                     QRVSDQTVVLELLTELARIYNRFNLCYLRKCKIDDETQLVSLSDLRVDLNQKLVKEPV
                     RIVNRKMNTISRVSLNTRSTVPDDRPVE"
ORIGIN      
        1 atgacgcctt atgagatgct gtatggtccc aaatgtagaa cgccgacttg ttggttagaa
       61 gctggagaga aacagtttgt aggtccagaa ttagttcgaa tcacagcaga aaaggtggta
      121 atagcacgtg aaaagttaaa agcggcacgt gatagacaga aaatgtatgc cgatccacgt
      181 agacgtttgg taaactttga ggtgggagat cgtgtttact tgaaagtttc accgtggaaa
      241 ggagttatca ggtttggcaa gtggggtaag ttagctccaa gatacatcaa gccgttcaag
      301 attatccaga gggttagtga tcagacggtt gtgttagagc ttctgacaga gttggcaagg
      361 atatataaca gattcaactt gtgttacctt aggaagtgta agatcgatga tgagacgcaa
      421 ctggtttcat tgagtgattt gagggtggac ctgaatcaaa agctagttaa agaaccggtt
      481 aggattgtca atagaaagat gaacacaatc agccgagtgt ctcttaacac tcgatcgaca
      541 gtccctgacg atcgaccggt tgagtga
//
LOCUS       XM_071832092            1281 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841905), mRNA.
ACCESSION   XM_071832092
VERSION     XM_071832092.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1281
                     /gene="LOC139841905"
                     /note="uncharacterized LOC139841905; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841905"
     CDS             1..1281
                     /gene="LOC139841905"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688193.1"
                     /db_xref="GeneID:139841905"
                     /translation="MDFKALKLQMIRGALARRIILACLCFVLAMFIVSFTRIAGKIRT
                     NEPVLMNFDQCWFNRPRMKVSNVCHENLTFSVVKELTDRQMLRLDGRALCVGDNLYSD
                     ALSLRELGFMETFRANQNTIMRFEHDVEFETNYFDFVLSRTFGKVPIPARLVLEIERV
                     LRPGGIGVMIVDFDTFNIGSLVRSATPVSLLLRSSNILHVCGIGSFALIVFKKNLSNV
                     VYFENFRLPKECPSVLRNKPFMQHIEPLMEYQDLVSYLPNFVNVSSRNKLIYINMGTG
                     EMGPSYPIHPQAFNVYVVDHNVSALSAHVKKPGVTFVYHPGLVEGDNFGHSVNSAKYM
                     EAPLHEKRFEFIKWLKETAKDGDFVVLKMNAGETHLKVLFELFESGVICHVDEMFVHC
                     SEGVDCRNSRCHDCLSLFKGLRNAGVFVHRSLQD"
     misc_feature    <346..>528
                     /gene="LOC139841905"
                     /note="hypothetical protein; Provisional; Region:
                     PRK08317"
                     /db_xref="CDD:181382"
ORIGIN      
        1 atggatttca aagccctaaa actgcaaatg attcgtggtg cattggctag aagaataatc
       61 ctcgcatgtt tatgttttgt gttagctatg tttatcgttt cgttcactcg tattgcgggt
      121 aagattcgaa cgaatgagcc cgttttaatg aattttgatc aatgttggtt taatcgccca
      181 cgtatgaaag tatcgaatgt gtgtcatgaa aatttaactt ttagcgtcgt caaagagctt
      241 acggatagac aaatgttgag acttgatgga cgagcattgt gtgtaggtga taatttgtat
      301 tctgacgcct tgagcctgag agaattagga tttatggaaa catttcgtgc taaccaaaac
      361 acgattatgc gttttgagca tgatgtagag tttgaaacga actattttga ctttgtgctg
      421 tctagaacgt ttggtaaagt tcctattccg gctcgtttag tgttagagat tgaacgtgtt
      481 ttaaggccag gtggtattgg tgttatgatc gtcgattttg atacatttaa cataggtagt
      541 ttagtaaggt ctgcaacccc ggtttcttta ctactaagaa gttccaatat tcttcatgtt
      601 tgtggaattg ggtcgtttgc gttaattgta tttaagaaaa atttgagtaa tgtcgtgtat
      661 tttgaaaact ttaggctgcc taaagaatgc ccatcagttt taagaaacaa gccttttatg
      721 cagcatatag agcctcttat ggaatatcag gatttggttt cttacttgcc taattttgtg
      781 aatgtttcat caagaaacaa gctgatttac attaatatgg ggacgggtga aatgggtccc
      841 agctatccta ttcatccgca agcgtttaat gtctatgtgg ttgatcataa tgtttctgca
      901 ctttctgcac atgtgaaaaa gccaggtgtc acgttcgtgt atcatccagg gcttgttgaa
      961 ggtgataatt tcggtcatag cgttaacagt gccaaatata tggaagcccc gttgcatgaa
     1021 aaacgatttg agttcatcaa atggttgaag gaaactgcga aagatggaga ctttgttgtg
     1081 ctgaagatga atgcaggtga gacacacttg aaagtgttgt ttgagttatt tgaaagtgga
     1141 gttatttgtc atgttgatga gatgtttgtt cattgttctg agggcgttga ttgtagaaat
     1201 agtcgttgtc acgactgttt gagccttttt aaaggtctta gaaatgctgg cgtttttgtg
     1261 cataggtcgt tgcaggattg a
//
LOCUS       XM_071832093            2935 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At1g79540-like (LOC139841906), mRNA.
ACCESSION   XM_071832093
VERSION     XM_071832093.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-606               JBITNF010000004.1  143877706-143878311
            607-607             "N"                1-1
            608-2695            JBITNF010000004.1  143878312-143880399
            2696-2935           JBITNF010000004.1  143881457-143881696
FEATURES             Location/Qualifiers
     source          1..2935
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2935
                     /gene="LOC139841906"
                     /note="pentatricopeptide repeat-containing protein
                     At1g79540-like; The sequence of the model RefSeq
                     transcript was modified relative to its source genomic
                     sequence to represent the inferred CDS: inserted 1 base in
                     1 codon; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139841906"
     CDS             217..2577
                     /gene="LOC139841906"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: pentatricopeptide
                     repeat-containing protein At1g79540-like"
                     /protein_id="XP_071688194.1"
                     /db_xref="GeneID:139841906"
                     /translation="MKKLYSIFIHKPKFHHSFSSSSSSSSRTTEVLNILHSIDPMEPS
                     LEQITPFLSPEIVTSVLQQQQNPYLCFRFFIWASKRKQFRSWVSHNLVIQMLVSNKVE
                     NFDTYWKVLDEIKSNGFRISSDAFAVLIXGYWKMKNGEKAVDTFGKMKEFHCEPNLFT
                     YNLILHVLVNKGMIFLALAVYNLMLKLNCHLNCATFSIIIDGLCKSGKISNALVLYDE
                     MIKRGIMPNKVTYTVVLSGLCQAKRIDDAYRLFDDMKSSGIKPDSVTYNALLNGVCKL
                     GKMDEALVLLNNFKNDGFELDLNSYSSLIDGLFRAKRFNEAHDMFNKMIEAEISPDVV
                     LHTIMIRGLCDDGRVHDAFKMVKGMKDKSFVPDTQTYNTLIKGFCDEGLLDEARSLKL
                     EISNVDGFPDTTTYTILISGMCRYGLIGDAQHIFNEMERFGCVPSVVTFNALIDGLCK
                     SSELKKSYLLYYKMEIGRNPSLFLRLTQGSDKVVDSESLQKLVTKLCESESMLKAYKL
                     VTQLADTAITPTIRTYNILINGLCKNGMLNGAKKLFKELQMDGNSPDSVTYGTLINGL
                     ESVGLDDEAFLLLSEMARNGCKPTSIIYKTLMKWSCRRNKTSDAFDLWLTYLKGQPKR
                     DETVIKLVEKCFQKGEIERPVRLLLDMDIKLQDLDPAPYTIWLIGFCQGRKTNEALML
                     LNILREYDINLTPASCVMLVTTLCKEGKLNLAVEVFVYALEKGFILQPRICNNMIKSL
                     IQSRLDDCVFDLMEKMESCGYDLDRYLDKGTRSLVRKQEMKNVLPK"
     misc_feature    478..567
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    541..726
                     /gene="LOC139841906"
                     /note="Pentatricopeptide repeat domain; Region: PPR_3;
                     pfam13812"
                     /db_xref="CDD:316342"
     misc_feature    589..672
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    682..831
                     /gene="LOC139841906"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    694..777
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    799..882
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    <823..>2046
                     /gene="LOC139841906"
                     /note="maturation of RBCL 1; Provisional; Region:
                     PLN03218"
                     /db_xref="CDD:215636"
     misc_feature    898..987
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1003..1077
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1108..1194
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1213..1302
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1324..1407
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1423..1512
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1528..1611
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    <1768..>2505
                     /gene="LOC139841906"
                     /note="maturation of RBCL 1; Provisional; Region:
                     PLN03218"
                     /db_xref="CDD:215636"
     misc_feature    1783..1866
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1882..1971
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2203..2283
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2299..2388
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2404..2490
                     /gene="LOC139841906"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 tgaaacaatg tccatcatca ccgtcgatcc ctgcaacctc ctccttcctc cgccgctgcc
       61 gttacaaaca caaaatctca aaaatacaaa acctccaaac ctatatatac ctacatatat
      121 atgtgtatct ataacttcat tattgcaact agaaccctaa tgagactaca acaatggtgc
      181 cttctttaat ccctatttca cattcaacta ttataaatga agaagcttta ttcaatcttc
      241 attcacaaac ccaaattcca tcattcattt tcatcatcat cgtcttcatc atctcgaaca
      301 acagaagtat taaacatatt acattcaata gatccaatgg aaccatcact tgaacaaata
      361 accccatttc tttcacctga aattgttact tctgttcttc aacaacaaca aaacccttat
      421 ctttgttttc gatttttcat ctgggcatca aaaagaaagc aattccgcag ctgggtatct
      481 cataatttgg taatacaaat gcttgtttct aataaagttg aaaactttga tacttattgg
      541 aaagttcttg atgaaattaa gagtaatggg tttcgaatat cgtccgatgc gtttgcggtt
      601 ttgattntcg ggtattggaa gatgaagaat ggtgaaaaag ctgttgatac ttttggtaaa
      661 atgaaagaat ttcattgtga acctaacttg tttacttata atttgatact tcatgtttta
      721 gttaataaag gtatgatctt tttagcattg gctgtttata atttaatgct gaagttgaat
      781 tgtcatttga attgtgcaac ttttagtatt ataattgatg gcttgtgcaa aagtggcaag
      841 atttcgaatg cacttgtact ttatgatgag atgattaaaa gaggtattat gcctaataaa
      901 gttacttata cggttgtcct ttcggggttg tgtcaagcta agaggattga tgacgcatat
      961 agattgtttg atgatatgaa aagcagtggt attaagcctg attcggttac ttataacgct
     1021 ttacttaacg gggtttgtaa attgggtaag atggatgagg cactcgttct tttaaataat
     1081 ttcaagaacg atggttttga gcttgatttg aatagttata gctcattgat cgatgggctt
     1141 tttagagcta aaaggtttaa cgaagctcat gacatgttta acaaaatgat tgaagctgag
     1201 atttcaccag atgttgtttt gcatacgatt atgattcgtg ggttatgcga tgatggtagg
     1261 gtacacgatg cgtttaagat ggtaaaagga atgaaagata aaagcttcgt acccgatact
     1321 caaacttata atacgttgat aaaagggttt tgtgatgagg gtttattgga tgaagcccgt
     1381 tcgctaaaac ttgaaatttc gaacgttgat gggttcccgg atactacaac ttacactatt
     1441 cttatttcgg gtatgtgtag atacggtcta attggagatg cacaacatat ttttaatgaa
     1501 atggaacgat ttggatgtgt tccttcggtt gttacgttta atgctcttat agatgggctt
     1561 tgtaaatcga gtgagcttaa aaaatcttac ttgttatatt acaaaatgga aattggaaga
     1621 aacccgtctt tgtttctgcg gcttacacaa ggttcggata aagttgtcga tagtgagagt
     1681 ttgcagaaat tagtcacgaa attatgcgaa tcagaatcaa tgcttaaagc gtacaagctt
     1741 gtcacgcagc ttgcggacac tgcaatcacg ccaactataa gaacttataa tatattgatt
     1801 aacggtttat gtaaaaacgg gatgttaaac ggtgctaaaa agctttttaa agagcttcaa
     1861 atggatggaa attctcccga ttcggttacg tatggaacac ttattaatgg gctcgaaagt
     1921 gttggtttag atgacgaagc gtttttgctt ttaagtgaaa tggcaagaaa tggatgtaaa
     1981 ccgacttcga taatttataa aacgctcatg aaatggtctt gtagaaggaa taagacatct
     2041 gatgcttttg atctctggtt gacttattta aaaggtcaac ctaaacgaga cgaaacggta
     2101 attaagttgg tcgagaagtg tttccaaaaa ggtgaaatag aacgacccgt gaggttatta
     2161 cttgatatgg atataaagtt gcaagatttg gatccagcac catatacaat ttggttaatt
     2221 ggattttgtc aagggcgtaa aacgaatgaa gcgttaatgt tacttaatat tttgagggaa
     2281 tatgatatta atcttacacc tgcaagttgt gtgatgttgg ttactactct ttgtaaagaa
     2341 gggaaattga atttggcagt tgaagttttt gtttacgcat tggaaaaagg tttcatattg
     2401 caaccaagaa tctgcaataa tatgattaaa tcccttattc aatctcggtt ggatgattgt
     2461 gtttttgatc ttatggagaa aatggagtcg tgtgggtatg atttagatcg gtatctagat
     2521 aaaggtacaa ggtctcttgt aagaaaacaa gaaatgaaaa acgtgttacc aaaatgagga
     2581 tgcacacgaa gtatttaata tattactatt caagagtcaa cgttggtcaa cgtccaactc
     2641 gacctttcaa ggtcttggcc gactcgtatc cggatgctca ctacaaagat gacaggtaca
     2701 ttttgtcatc tcaatttgac aacaaaccag aggctacata aatgtatatt atttgaaagc
     2761 tactattcca agcgtaggtc aagattgaaa ggcaaggagt gttcaagttg tagttgattc
     2821 cctgttatcg caactttaac cctttattct aaagcatata acagttgcag aaagcctgaa
     2881 agattgaaaa gtttgttaaa cttagctata catgcaaatg agcatgtttt aaagg
//
LOCUS       XM_071832094            1608 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841908), mRNA.
ACCESSION   XM_071832094
VERSION     XM_071832094.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1608
                     /gene="LOC139841908"
                     /note="uncharacterized LOC139841908; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841908"
     CDS             1..1608
                     /gene="LOC139841908"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688195.1"
                     /db_xref="GeneID:139841908"
                     /translation="MGMKVKHLMLCCKESAQNFLADAFRSIAPKSMQHTFEQPNFLQD
                     MIAMFCADNTDTRTKKATEITTAADKFVQHISNYPIVTLPIVPATLGVYSGLTDPLDF
                     LQRFEGVVSTYNWDEPVACRVFPMVLQGSAREWFHSLQARSIIGFIDLRDKFLLHFQN
                     LLPQKKTNIECHDIKQGNKETLSTLLTRYIYECQKIPSLNEDQKVSGFLHAINPQRHP
                     TLVRRLRRDVPPTFAKVQQETYDYLRGGEDSTITPTCGWGKEKSRRDDNDSFRDGNSD
                     NYRGNGFSRRNGGSGYLRNDRFQGENSRRDRLKFCVFHDDYGHDTNRCRDLVGLIAEA
                     YEQGKLDHLIAQGTTSTANAIMMPAEANAPNVPNVAERKAPAVKNLGVKTVSKKENQR
                     GIQVINVVEVQGEMLVFQISEQIASWKCPSITFPPTNLTTNVDKPVVVSCRIANTGIM
                     IMKVHVDTGSSVDVMYEQCFSKLPADVQALMKPTAISLAGFSGESTWAIGQLELQIEL
                     VDDCDESLRRQALLNLYIMRSKMAWFR"
     misc_feature    364..642
                     /gene="LOC139841908"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1318..>1524
                     /gene="LOC139841908"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1369..1371,1375..1377,1381..1383,1462..1470)
                     /gene="LOC139841908"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    1369..1377
                     /gene="LOC139841908"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    1369..1371
                     /gene="LOC139841908"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(1462..1473,1483..1494)
                     /gene="LOC139841908"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgggaatga aggtgaagca tctgatgctg tgttgcaagg aaagtgctca aaatttttta
       61 gcagatgctt ttagaagcat tgcgcctaaa tcaatgcaac atacatttga gcaaccaaat
      121 tttttgcaag atatgatcgc catgttttgt gcagacaata ctgatactcg cacaaaaaag
      181 gccactgaaa tcaccactgc tgcagacaag tttgtccagc atatttctaa ttatccaatt
      241 gttacactgc ctattgtgcc agcgacgttg ggagtttatt cagggttaac tgacccctta
      301 gactttttgc agcgatttga aggtgtggta agcacctata attgggatga accggttgcg
      361 tgcagagtat tccctatggt cttgcaagga tccgctaggg agtggtttca tagcctgcaa
      421 gctcgcagta tcattggttt cattgatctt cgcgataaat ttttgttgca ttttcagaat
      481 cttttaccgc agaagaaaac aaatatagaa tgtcatgata ttaaacaagg aaacaaagaa
      541 actctgagca cgttacttac gcggtacatt tatgagtgcc aaaagatacc aagtttaaat
      601 gaagaccaaa aagtttctgg ttttttgcat gctattaacc cacagcgaca tccaacactt
      661 gtgcgaagat tgcgaagaga tgttccacca acttttgcta aggttcaaca ggaaacatat
      721 gactatctcc gtggtggaga agatagtact ataactccta catgtgggtg gggtaaagaa
      781 aaaagtcggc gggatgacaa tgattctttt cgcgatggca acagtgataa ttaccgcggt
      841 aacggttttt cgcggagaaa tggcggcagt ggttacctgc gaaatgatag gtttcaaggg
      901 gagaatagca ggcgggatag gttaaagttt tgtgttttcc atgatgacta tggtcatgac
      961 accaatcgct gtagagattt agtgggactg atcgcggagg cttatgagca aggcaagctg
     1021 gaccatttaa tcgcgcaggg tactacaagt actgcgaatg cgattatgat gcctgcagaa
     1081 gctaatgctc caaacgtacc aaatgtggct gagaggaagg ctcctgcggt gaaaaatttg
     1141 ggagtaaaaa cagtaagtaa gaaagaaaat cagcgcggaa ttcaggtcat taacgtggta
     1201 gaggtgcagg gcgaaatgtt ggtatttcaa atatctgaac agattgcaag ctggaaatgt
     1261 ccttctatta cttttcctcc tacaaatctg actacgaatg tagacaaacc agtggtggtt
     1321 tcatgtcgca ttgcaaatac tggtataatg attatgaagg ttcatgtgga tactggtagt
     1381 agtgtagatg ttatgtacga acaatgtttt agcaaactgc ccgcagatgt tcaggctttg
     1441 atgaaaccta ctgcgatttc acttgcagga ttttcaggag agtcaacttg ggctattggt
     1501 caattggagt tgcaaattga gctagttgat gattgcgatg agtcgttaag gcgacaagct
     1561 ttattgaatc tttatataat gcgaagtaaa atggcatggt ttcgctaa
//
LOCUS       XM_071832095             648 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841909), mRNA.
ACCESSION   XM_071832095
VERSION     XM_071832095.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..648
                     /gene="LOC139841909"
                     /note="uncharacterized LOC139841909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841909"
     CDS             1..648
                     /gene="LOC139841909"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688196.1"
                     /db_xref="GeneID:139841909"
                     /translation="MGKRSHPISGRSARTLGFTIKGSIKSYGYIIKRLHVDTGCGVDI
                     MYVHYFWLLPRAVRAKIIAPSTALSGFSGESAWPIRIIELELELVDDDNKELVRTIPS
                     TVHGLIKFPTLLGITTIRSETQDASVAAVEQAEKQPTSNTDVFSWKEADMNGVPREIA
                     EHKLNANLSLTPVRQKKCGMAPERSKWLKAEVDKLVKANILREVRYQTWVANPVL"
ORIGIN      
        1 atgggaaaac gctcccatcc tatttccggc cgtagcgcaa gaaccctcgg attcacaatt
       61 aaagggagca ttaaaagcta tgggtacatc ataaaacgat tgcacgtaga cactggttgc
      121 ggtgttgata taatgtatgt acattatttc tggttgctgc ctagagcagt acgagctaag
      181 ataatagctc ctagcaccgc attatcaggg ttttctgggg agtccgcatg gccaattagg
      241 atcatcgaat tggaattaga actggtagat gatgataata aggagttagt aagaactatt
      301 ccatccacag tgcatggtct cataaagttc ccaactctac taggaatcac gacgataagg
      361 tcggaaacac aagatgcaag tgttgcggct gtagaacaag ccgaaaaaca gccaacctct
      421 aatacggatg tcttttcatg gaaagaagca gacatgaatg gtgtaccaag agaaatagct
      481 gagcataagc ttaatgcaaa cctaagtctg acaccggtac gccaaaagaa atgcggtatg
      541 gcaccggaaa gaagcaaatg gttgaaggca gaagttgaca aattggtcaa agcaaatata
      601 ttacgagaag tgaggtacca aacgtgggtg gcaaacccgg tactgtga
//
LOCUS       XM_071832097             648 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841910), mRNA.
ACCESSION   XM_071832097
VERSION     XM_071832097.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..648
                     /gene="LOC139841910"
                     /note="uncharacterized LOC139841910; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841910"
     CDS             1..648
                     /gene="LOC139841910"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688198.1"
                     /db_xref="GeneID:139841910"
                     /translation="MKLLNCFERVSGLKVNYHKSLNYGLGVSLGEVERLALRGGCKVD
                     NLPFTYLGLPIGRNMNRVKIWKPVFDKFNSKLASIRRNFLFGYATGERAKLTWVKWED
                     SLLPYSEGGLNIGSRQGKNLALLGKWFWRIKKKPSSLWVSILKSIHGANWIHILLGPN
                     RPVGKTGVWLNIISAGYSIDKTGLGTSFVKQIGDGNNKFWTEPWLSGEMLKDRFL"
ORIGIN      
        1 atgaaactac tcaattgttt tgaacgggtc tcgggtttaa aagttaatta tcacaagagt
       61 cttaattacg ggttaggggt gtctttaggt gaagttgaac ggttggctct tagaggtggt
      121 tgcaaagttg ataatctccc gttcacttac cttggcctcc cgattggtcg taacatgaat
      181 agagtgaaaa tttggaagcc cgtgtttgat aaatttaact ccaagctagc gagtattagg
      241 cgtaattttt tatttgggta tgcgacgggt gagcgtgcta aattaacttg ggtcaaatgg
      301 gaagattctc ttttgcctta tagcgaagga ggtcttaaca ttggatctcg tcaggggaag
      361 aatcttgctt tgttgggtaa atggttttgg cggattaaaa agaaacccag ctcactttgg
      421 gtctcaattt taaaaagcat tcatggagct aactggatac acattctctt gggccccaat
      481 aggccagttg gtaagactgg tgtgtggctc aatattatta gtgcaggtta ctctattgac
      541 aagacgggtt taggcacgtc attcgtgaag caaataggcg acggtaacaa caaattctgg
      601 acggaaccgt ggctttctgg cgagatgctg aaagatagat tcttgtga
//
LOCUS       XM_071832098             318 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841911), mRNA.
ACCESSION   XM_071832098
VERSION     XM_071832098.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..318
                     /gene="LOC139841911"
                     /note="uncharacterized LOC139841911; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841911"
     CDS             1..318
                     /gene="LOC139841911"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688199.1"
                     /db_xref="GeneID:139841911"
                     /translation="MAFSPSAYNFFHPNAKSPNTKEQCNESSCSPLPMAATVQSNLAE
                     ESVSKTEKSKSKVGAGGIMGVIFGFVFVVLLTMGAYYVVTNRKSNLRRESTVLHSCPL
                     LSL"
ORIGIN      
        1 atggcgtttt cgccatccgc gtacaatttc ttccatccaa acgcaaaatc gccgaacact
       61 aaagaacaat gtaacgaatc tagttgttca ccgttgccca tggctgctac ggtgcaatca
      121 aacttagcag aagaaagcgt atctaaaact gaaaagagta agagtaaagt tggagctgga
      181 ggcattatgg gtgtgatatt tggtttcgta tttgtggttc ttttaactat gggcgcttac
      241 tatgttgtaa caaaccgtaa aagcaatttg aggcgcgaaa gtacagtcct acattcgtgt
      301 ccacttcttt cgctatga
//
LOCUS       XM_071832099             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein S40-4-like
            (LOC139841912), mRNA.
ACCESSION   XM_071832099
VERSION     XM_071832099.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139841912"
                     /note="protein S40-4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841912"
     CDS             1..585
                     /gene="LOC139841912"
                     /codon_start=1
                     /product="protein S40-4-like"
                     /protein_id="XP_071688200.1"
                     /db_xref="GeneID:139841912"
                     /translation="MAASRTYFGRGNHRYLSSAKEIIQAPSLTFEFNEFDVWNVTSSP
                     EFHKSIKTSRISKKQSPETENRVTALSLPVDVPDWSMILKQELTANRSAVSHGDSDDF
                     DDDLFSDDLIPPHEYLAKARIASFSVHEGIGRTLKGRDLSRVRNALNNMFNYGVLDVL
                     TRIICYCECNLQFLMNFVSDVTLFRFVLENGYDN"
     misc_feature    <211..441
                     /gene="LOC139841912"
                     /note="Senescence regulator; Region: Senescence_reg;
                     pfam04520"
                     /db_xref="CDD:461341"
ORIGIN      
        1 atggcagctt ctagaaccta cttcggtaga ggtaaccacc gctacttatc tagtgcaaaa
       61 gaaatcatcc aagcaccaag tttaaccttc gaattcaacg aattcgacgt ctggaacgtc
      121 acatcgtcgc cggaatttca caaatccatc aaaacttcac gaatctcaaa gaaacagtca
      181 ccggagacgg agaatcgcgt aacggcgtta tcgctgccgg ttgatgttcc tgattggtcg
      241 atgatactga aacaagagct cacggctaac cgttccgccg ttagccacgg cgacagtgat
      301 gattttgacg acgatctgtt ttccgatgac ctaattccgc cgcatgagta tttagcgaaa
      361 gcgagaattg cgtcgttttc cgtacacgaa ggaattggaa ggacgttaaa aggtagagat
      421 ctgagtagag ttcgtaatgc tttgaacaat atgttcaatt atggagtatt agatgtgctt
      481 acacggatta tatgctactg cgagtgcaat ttgcagtttt tgatgaactt tgtatctgat
      541 gttacacttt ttagatttgt tcttgagaat gggtatgata attga
//
LOCUS       XM_071832100            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841914), mRNA.
ACCESSION   XM_071832100
VERSION     XM_071832100.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139841914"
                     /note="uncharacterized LOC139841914; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841914"
     CDS             1..1035
                     /gene="LOC139841914"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688201.1"
                     /db_xref="GeneID:139841914"
                     /translation="MALTKTPKEILFTEPVKETFHPPPPMEERQGPQSDKWCDFHEAY
                     GHDTDNCKSLMREIIAKIKAGELNHLLPGKQYRRNDPNKRFAWQGKVRHGERRDWNRK
                     EEREDERDPTPEMHIKFIWNEVEENETDGERRTEHWMYAPIIFHTIPNWCLSEEPVVI
                     LAVIANRSITRIYTDTGSEADLLYLHCFKDYPFSVKDRLHYTNLKIAGITGQSMRAVG
                     KVKLDVTLGTHPLVRTEIVDFTILDGRSRFNALFGRRTLRKFRAITSTPHAELRFPTP
                     NGVAVIRSEYVGPARERSVVYEAQGNFVRGGSTRQFFNRNDVNGISNHPKCGSLKRHA
                     TRCTEDSMLT"
ORIGIN      
        1 atggctttaa caaaaactcc aaaggagatt ttgttcactg aacctgttaa ggaaaccttt
       61 caccctccac caccaatgga agagcgtcag ggaccacaga gtgataaatg gtgtgatttt
      121 cacgaggcat atgggcatga tactgacaat tgtaaatcat tgatgaggga aatcattgca
      181 aagattaaag ccggagagtt aaaccatctg ttaccaggaa aacagtatag gaggaatgat
      241 ccaaacaagc gttttgcttg gcaaggaaag gtgcgtcacg gtgaacggcg tgattggaac
      301 agaaaagaag aaagggaaga tgaaagagat ccaacccctg aaatgcacat caagtttata
      361 tggaatgaag tagaggagaa cgaaacagac ggagagcgta ggacggagca ttggatgtat
      421 gctccaatca tatttcacac cattccaaat tggtgcctat cagaggagcc tgtggtcatt
      481 ttagctgtaa ttgcaaacag aagcatcact cgaatctata ctgatacagg tagtgaagca
      541 gatctcttat atttgcattg tttcaaagat tatccgttca gcgtaaagga taggcttcac
      601 tacacgaact tgaagattgc tggcatcacg ggacaatcga tgagggcggt tggtaaggtg
      661 aaattggatg taacattggg aacacaccct ttagtccgaa cagaaattgt ggactttacg
      721 attcttgatg gcagatcaag attcaatgcc ttgtttggta ggcgaactct tcgcaaattt
      781 agagcaatta cttctacacc acacgcagaa ttgcggttcc caacaccaaa tggtgtggca
      841 gtgatacgct ctgaatatgt tgggccagca agagagagat cagttgttta tgaagctcaa
      901 ggaaattttg ttagaggagg atcgacgagg cagtttttta acagaaatga tgtgaatggt
      961 atttcaaatc acccaaaatg tgggagcctt aaaaggcacg caacacgctg cacggaggac
     1021 agtatgttaa catga
//
LOCUS       XM_071832102            5107 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841915), mRNA.
ACCESSION   XM_071832102
VERSION     XM_071832102.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5107
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5107
                     /gene="LOC139841915"
                     /note="uncharacterized LOC139841915; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841915"
     CDS             1..4923
                     /gene="LOC139841915"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688203.1"
                     /db_xref="GeneID:139841915"
                     /translation="MSANFVAINFPPIYTMAKTKDASTAISLGSRKSVRKKALKYPGF
                     GGRKRKRLNANRYKYIFKPQRTRIESDDKGVAKRQHNSPKHNGRTNRECVGGNMEKQV
                     GDDNDNHIFDTSSSRHDIANQQELDRCDKVAGTCEAAGVKESVVEDYGNISTSSKFVE
                     FWVPVQLSNVQLEQYCATLLSNARVLSGSKDTVGGAHYDIFVSIRKCCNHPYLVDPTL
                     HSNILKDQEPTMLKMDADIKSSGKLQFLDLVLPEVKKRSLRVLILFQSATITTKGVPS
                     VGEMLIDFVHQKFGEDSYECVLTGLQPSKRQTALNKFNEDMTISFFLLEHRACHVNIR
                     LTSVDIIFIFDSDLTPANDLKSLQKISVDSHSEQIVIFRLYSSSTLEEKILKLADTNE
                     GKLQNVRSRYNALLRWGASNLFDRLTEFHSGSVFGISYEESFLKDVVEEFLYLISNKF
                     ESNDKSKSIITRIQNFGIYGETETKTQLPDGDQPRIFWKKLLDGRFPIWKFVPFSTPR
                     LRKRTHYIDGATDGTGTEGGGVKIRRKALKPVIEMVTGSLNEGGFGVQSTALNNDKSL
                     RDLLKATMSELFNVLELSDDVKITVEKFLEFVLENYRLSNEQTSTLHAVMISMCWIGS
                     ALQNIDIDRLESFDIAKKHLKFICQLDEAYSVYAKLQPAKEAFVQTERPASKKSIFST
                     QRAKIDTEQSQLSCKEEIKKRYREWEDQKVSLENKYRMDQERICSMHSNLSVRSEKLT
                     RLKESFDSKLEKHGKMWEVYLKEKASQLTANGGFSLHGPKDNSPEMGPSHDRTNVSMP
                     NVAEGDDGLYDVEIEHDVARKVDSPAVEHHNEAGSVDEGLHVSMPNVAEGDGLYDVEM
                     TVCRTFEKQMTDAAIVLSGPIGEVSSQSHDDIEHDVAREVDLPAVEHHTEVGSVDEVK
                     AADGGEDRRDLRSFISNPPSIESSPEVIILEAENESLQAQPFPHRENQDNEPNSLGEI
                     DVECRPSLDGGQLGQIILEASSLDPHDEPSLVAGNQSNMLQESEILLEPISEQLPEGP
                     TSSVTAEIQNPITLSPALNMCESVNRAGRQPPNHANPLQAEEERLRLAMDDVVKLHEE
                     TKKRLKIDCENEKAKICAEIDLKYEAKCQEEELAFQSKKKEIDTNVKHAMFNKLLAAA
                     LSSMCQQLTLLGDAGLQTGLMQQLNWLSDSSLVRHSLSADSTSSNSHPTTSPPLSTPV
                     STSPPPPPTALRSQSPLQIVHQPADLFSSQPPPITNRSSVPLTTSPTTRLPPVIIPIT
                     TSTTSNTLSVANQKVNDETLGPASHIRPPVTKGEVGLPAPHMLTLPRSDIRSPAPHLG
                     LRGPAPHIKPFRPTSSVPPDFATQPRIPPPQHITNTPLTSPANLQSLNLPPNPTSSTR
                     PLPPQPPSSISSPQPLPPLPPEPNVVPLPLPSSSNSSQQSLPPLPPEPNIMPPPPPSS
                     ESFPPLLTEPYVVPPPPPPLSGSSPQPLPPLPPKPNVVPPPSSDSSPQPLPPLPPEPT
                     IVPLPPPPPPPSSESFPPLPPLPTEPCVVPPPPPPPLASSPPLLLEPYVEPPPPPSAP
                     PGFSPRLLPLLPIETYLVPPPPISIQATSSTLPNTSSDTSSSNLTRGKPSSSSSSFTT
                     DHLMLPITMPGIIDLTTHPSSPEVICLDDD"
     misc_feature    <493..>1164
                     /gene="LOC139841915"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
     misc_feature    3520..>4125
                     /gene="LOC139841915"
                     /note="Atrophin-1 family; Region: Atrophin-1; pfam03154"
                     /db_xref="CDD:460830"
ORIGIN      
        1 atgtctgcta attttgtggc tataaatttt ccaccaattt acacaatggc taagacgaaa
       61 gatgcatcta ctgctattag tttgggatca agaaaatctg ttagaaagaa agctcttaag
      121 tatccaggtt ttggtggtag aaaaaggaag agattaaacg ctaatcgtta taagtatata
      181 tttaaacctc aacgaacgag aattgaatca gatgataagg gggttgcaaa aaggcaacac
      241 aactctccta aacataatgg tagaaccaac cgagaatgtg ttggtggtaa tatggagaaa
      301 caagttggtg acgataatga taaccatatc ttcgacacat catcatcgag gcacgatata
      361 gcgaatcaac aggaacttga ccgttgtgac aaggttgcag ggacatgtga agccgctggt
      421 gtcaaagaga gcgtagtaga ggattatgga aatatatcta cgtcttcaaa gtttgtagaa
      481 ttctgggttc ctgttcagct gtctaatgtg caacttgaac agtattgtgc taccttactt
      541 tctaatgcaa gagttcttag tggctcaaaa gataccgttg gtggggctca ctatgacatt
      601 tttgtttcca tccgtaagtg ttgtaatcac ccctatctcg tagatcctac acttcacagc
      661 aacatcttaa aggatcaaga accaactatg ttaaaaatgg atgctgacat taaatcaagt
      721 ggtaaattac agtttcttga tctagtactg cccgaggtta aaaaacgctc actaagagtg
      781 cttattcttt ttcagtctgc aactattacc acaaaaggtg ttccttctgt tggggagatg
      841 ttaattgatt ttgtacatca aaagttcggt gaagactcat atgagtgtgt gctgactgga
      901 ctccagcctt cgaaaaggca aactgctctg aacaaattta atgaagatat gaccatatcg
      961 tttttcttac tagaacatcg tgcgtgtcat gtgaacatca gactaacatc ggtagatatt
     1021 atattcattt ttgatagcga cttgactcct gcaaatgatt tgaaatcctt acagaaaata
     1081 tcagttgatt ctcactcgga acaaattgtg atttttcgtt tatattcatc atcaactttg
     1141 gaagagaaaa ttctgaaact tgctgatacc aatgaaggca agttgcaaaa tgtaaggagt
     1201 agatataatg ccttacttag gtggggagcc tctaacttat ttgacagatt gaccgaattt
     1261 cattctggat ccgttttcgg tatctcatat gaagaatcat tcttgaagga tgtagtggaa
     1321 gagtttttat acttaatttc taacaagttt gaaagcaatg ataaatctaa gtcgatcata
     1381 acgcgcattc aaaactttgg aatttatggt gaaactgaga caaaaaccca gttacccgat
     1441 ggagaccaac cacgtatatt ttggaaaaag ttgttggatg gaagatttcc aatttggaaa
     1501 tttgtacctt tttcgacccc tcgactaaga aaacgaaccc attacataga tggagcgact
     1561 gatggaacag ggacagaggg tggtggtgtg aagatacgta ggaaggcttt aaagccggta
     1621 attgaaatgg taaccggaag cctaaatgaa ggtggttttg gggttcagtc tacagctctt
     1681 aataatgata agagtctacg tgacctcctg aaggccacta tgtctgagct ctttaatgtt
     1741 cttgagttat ccgatgatgt taagatcaca gtggagaaat ttctagaatt tgtgcttgaa
     1801 aattatcgtc tcagcaatga acagacaagt acattacatg ctgtaatgat atcaatgtgt
     1861 tggatcggct ctgcacttca aaatatcgac attgataggc ttgaatcctt tgatattgca
     1921 aagaaacact tgaagttcat ctgccagctt gatgaagcat actcggtgta tgcaaaacta
     1981 caaccagcga aggaggcatt tgtacaaacg gagcgacccg cttcaaaaaa gtccattttc
     2041 tctactcaac gggcgaaaat cgacaccgaa caatctcaac tgtcgtgcaa agaggagatt
     2101 aagaagcgtt acagagaatg ggaagatcag aaggtgagct tagaaaataa atacagaatg
     2161 gatcaagagc gtatttgttc aatgcatagt aatctctctg taagatccga gaaattgact
     2221 cgattaaaag aaagtttcga tagcaaactg gaaaaacacg gaaaaatgtg ggaggtttac
     2281 cttaaagaaa aggcaagtca gctgacagct aatggtgggt tttctttaca tgggcctaaa
     2341 gacaatagcc ctgagatggg ccccagtcat gatcgtacta atgtgagcat gccaaatgtg
     2401 gcggaaggtg atgatggcct ttatgatgtt gagatcgagc atgatgttgc aaggaaagtt
     2461 gattcgcctg ctgttgaaca ccataacgag gctggctcag ttgatgaagg gttacatgtg
     2521 agcatgccaa atgtggcgga aggtgatggt ctttatgatg ttgagatgac agtctgtcgt
     2581 acctttgaaa aacagatgac tgatgctgca atcgtattga gtgggccaat tggagaagtt
     2641 tcatcgcaaa gtcatgatga catcgagcat gatgtcgcaa gggaagttga tttgcctgct
     2701 gttgaacacc atactgaggt tggttcagtt gatgaagtga aggctgctga tggtggtgaa
     2761 gaccgtagag atttgcgcag ttttattagt aatccaccct ctatagaatc atcacctgaa
     2821 gtaataatcc tggaagctga aaatgagtct cttcaagctc aaccgtttcc acaccgtgaa
     2881 aatcaagata atgaacctaa ttcgttgggt gaaatcgatg ttgaatgtag accatcttta
     2941 gatggcggtc aactcggtca gatcattctg gaagcttcat cacttgatcc tcatgatgaa
     3001 ccatcactgg ttgctggaaa tcaatctaat atgcttcaag agagtgagat cttgcttgaa
     3061 cctatttctg aacaattgcc tgagggaccc acgtcttcgg ttactgcaga aatccagaat
     3121 cctatcactt tatctcccgc tttaaatatg tgtgaaagcg ttaaccgtgc gggccgacag
     3181 cctccaaatc atgctaatcc acttcaagct gaagaggagc ggttacgctt agcgatggat
     3241 gatgttgtca agttgcatga agaaactaag aaaaggctga aaattgattg cgagaatgag
     3301 aaagcaaaaa tttgtgctga aatagatctc aagtatgaag ctaagtgtca agaggaagag
     3361 ttggcttttc aatcaaagaa gaaggaaatc gatacgaatg tcaagcacgc tatgtttaat
     3421 aaattattag cagctgcttt gagctctatg tgtcaacaac ttactctttt gggcgatgca
     3481 ggcttgcaaa ctggattaat gcagcaactg aattggttgt ctgattcatc tcttgtgcga
     3541 cattccctta gtgctgattc aacttcatca aatagtcacc ccactacatc accgccactt
     3601 tcaacgccgg tgtcaacatc accgccacca ccaccaacgg cacttcgatc acaatcgccg
     3661 ttgcagattg ttcaccaacc tgcagatctt ttctcgagcc aaccaccacc tattaccaac
     3721 cgttctagcg tcccattaac cacatctccc actaccagac tgccacctgt catcatccca
     3781 attaccacct caaccacatc aaacacccta tctgttgcaa atcaaaaagt aaacgatgaa
     3841 acccttggtc cagcctcaca cattcggccg cctgtaacaa agggtgaagt tggtcttccg
     3901 gccccacaca tgctaacttt gccaagaagt gatattcgtt ctccggcccc acacttggga
     3961 cttagaggcc cggccccaca tattaaacca tttaggccta catcatctgt acctcctgat
     4021 tttgcaactc aaccgaggat cccgccacct cagcatataa ctaacacacc gctaacctct
     4081 cctgcaaatc tccaatccct taatttacca ccaaacccaa cttcatcaac ccgtccactg
     4141 ccgccacaac caccatcatc aatatcctcg ccacaaccac tgccaccgct acctcctgaa
     4201 cctaacgttg tgccgctacc actaccttca tcatcaaact cctcccaaca atctctgcca
     4261 ccgctacctc ctgaacctaa cattatgccg cccccaccac cgtcatcaga atcattccca
     4321 ccactgctta ccgaacctta tgttgtgccg cccccacccc caccactgtc aggatcctcg
     4381 ccacaaccac ttccacctct gcctcctaaa cctaacgttg tgccgccacc atcatcagac
     4441 tcttccccac aaccactgcc accactacct cctgaaccta ccattgtgcc gctgccgcca
     4501 ccaccaccac caccgtcatc agaatccttc ccaccactgc caccactacc tactgaacct
     4561 tgtgtcgtgc cgccaccacc accaccaccg ttagcatctt cgccaccact acttttggaa
     4621 ccttacgttg agccaccacc accaccatct gcgcctccag gattctcacc acggctactg
     4681 ccgctactcc ctatcgaaac ttacctggtg ccaccaccac caattagcat tcaggccacc
     4741 tcatctacac ttcccaatac ttcctctgac acatcatcat ctaatctcac aaggggaaaa
     4801 ccatcatcat catcatcatc attcacaact gatcatctga tgctgccaat caccatgcct
     4861 ggtataatcg acttaactac acacccttct agccctgagg ttatctgttt ggatgatgac
     4921 taactagttg atcactacat tttgtatata ttatattaaa aaatataact attgtaaaga
     4981 atgggcatcc ggtaaatcta gaaagggcaa aatattgtag ttttggaatc ggaacaagaa
     5041 cgaaaacggt tactcgtttt ttgtacagct gctagcattc agctctaatt tattatactt
     5101 actggtt
//
LOCUS       XM_071832103            1275 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841916), mRNA.
ACCESSION   XM_071832103
VERSION     XM_071832103.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1275
                     /gene="LOC139841916"
                     /note="uncharacterized LOC139841916; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841916"
     CDS             1..1275
                     /gene="LOC139841916"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688204.1"
                     /db_xref="GeneID:139841916"
                     /translation="MLIYFVSKVLQQSEVNYPPIKKLVYALTHTARRLRRYFQAHSIL
                     VMTDQLIKYILRNPESSGRLAKWAIELGEYEINFSPRHAVKGQNLADFLLETTEKELH
                     TDGASSEEGVGAGLVLTSPEGEEHTYALRFCFYASNNEAEYEALFSSLRIALEMGIKH
                     LRAYVDSQIVAQQYLQLGEKISKNFETLEVVEIPRNKNKKADVLSKLATLTFDYLHKK
                     VLVDVLKDKSVDEKVVVATVEEREPCWITPYVKYLQDGTLPIDAMEARWIRQAIDVVK
                     EIHEGLCAQHSGYRTIVGRIMRQGYYLQSIYKDTADVIKTCDACQRHGTVQRLPNKWV
                     EAKVLAKITGENIKKFVWNDIVCIYGLPNEIVSDNGKQFADNPFRSWCEELNIKQTFT
                     SVAHPQANGQVEVTTKEIVVGIKARLGLSQTK"
     misc_feature    <7..219
                     /gene="LOC139841916"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    298..624
                     /gene="LOC139841916"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(310..321,409..417,424..426,496..498,574..576,
                     616..618)
                     /gene="LOC139841916"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    817..969
                     /gene="LOC139841916"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    <994..1212
                     /gene="LOC139841916"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgcttatat actttgtcag taaagtattg caacaaagtg aagttaatta tccaccaatt
       61 aagaaattgg tgtatgcttt aacacataca gctaggcgac tcagacgata ttttcaagca
      121 cattcaatcc tagtaatgac agaccagctg ataaaatata ttttaagaaa tccagagtca
      181 tcaggacgac tagcaaaatg ggcaattgaa ttgggagaat atgaaataaa tttttcgcct
      241 cgacatgcag ttaaaggtca aaatttggca gattttttat tagaaacaac agaaaaggag
      301 ttgcacactg atggtgcatc aagtgaggaa ggtgttggtg cagggttagt acttactagt
      361 ccagaaggtg aagagcatac gtatgcattg aggttttgtt tctatgcatc taacaatgaa
      421 gcagaatatg aagcattgtt ttccagcctc cgcatagcgt tagaaatggg aataaaacat
      481 ttgcgtgcat atgttgattc tcaaattgta gcacagcagt atttgcaatt aggtgagaaa
      541 atatcaaaaa attttgagac cttagaggtt gtggagatac caagaaataa aaacaagaag
      601 gcagatgttt tgagcaaatt agcaacatta acatttgatt atttgcacaa gaaagttttg
      661 gtggacgtct taaaagataa atcggttgat gaaaaggtag tggttgcaac agttgaagaa
      721 agggaaccat gttggataac cccctatgtg aaatatttgc aagatggaac actgccaata
      781 gatgccatgg aagcaagatg gataagacaa gcaattgatg tagtcaagga aattcatgaa
      841 ggattatgtg cacagcattc cggttataga actatagttg gacggattat gcgacaaggg
      901 tattatttgc agtcaattta caaagataca gcagacgtaa ttaagacatg tgatgcctgc
      961 cagcggcatg gaaccgtaca gcgcttaccc aataagtggg ttgaagcgaa ggtattggca
     1021 aaaataactg gggagaatat aaagaaattc gtgtggaacg atattgtatg catatatgga
     1081 ttaccaaatg aaattgtcag tgacaacgga aaacagtttg cagataaccc cttcagaagt
     1141 tggtgtgaag agttaaacat caaacaaaca tttacctcag tggctcaccc acaggccaat
     1201 gggcaagttg aggtaaccac caaagaaatt gtagtcggca taaaggctag gttaggtttg
     1261 agtcagacta agtag
//
LOCUS       XM_071832104             924 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841917), mRNA.
ACCESSION   XM_071832104
VERSION     XM_071832104.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..924
                     /gene="LOC139841917"
                     /note="uncharacterized LOC139841917; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841917"
     CDS             1..924
                     /gene="LOC139841917"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688205.1"
                     /db_xref="GeneID:139841917"
                     /translation="MIAFPSMFNTNPSDAPVVIEARIGNFIVGGIYTDTGAGADIMYK
                     HCFIQLPDRVKEKLKDTFVPLTSFANDPSWSEGSIVLEVVLGKTSFKRTAHIEFLVVK
                     AISQYNAILERSVMMTFGAVTSTVHGMMKFPTPAGIAMLYAERRKPIECVQINRTSVN
                     PIIHEDGSISPNPEFPDQKIIIGNTITKETKEKLYKILATNLDVFAWQDSDITGVPRH
                     VAEHKLGVNLNIPPVCQKKRGMAPDRTKFLREEVKKLVDTRILREVKYQTWVANPVVV
                     RKPDNSWRMCVDFTDLNKACPKDNYPLPKID"
     misc_feature    778..>921
                     /gene="LOC139841917"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgattgctt ttccttccat gtttaacacc aatccatctg acgctcctgt agtgattgaa
       61 gctcgaatag gaaattttat tgttggagga atatatactg ataccggagc aggagcagat
      121 atcatgtata aacattgttt tatacaacta ccagacagag ttaaggaaaa gctaaaggac
      181 acatttgttc ccttaacaag ttttgctaat gatccatcat ggtcagaagg aagcatagtt
      241 ttagaagtag tattgggaaa aacgtcattt aaaagaactg ctcatatcga atttttggtt
      301 gtgaaagcaa tttcgcagta taatgccatt ttagaacgat cagttatgat gacattcgga
      361 gctgtgacat caacggtaca cggaatgatg aaatttccca caccggctgg catcgccatg
      421 ctgtacgctg aacggagaaa accaatagaa tgtgtacaaa taaacagaac atctgttaac
      481 ccaatcattc atgaagatgg gtcaatatca ccaaatccag agtttccaga tcagaaaatc
      541 ataattggaa acacaatcac aaaagaaaca aaagaaaagc tttacaaaat cttagccaca
      601 aatttggatg tttttgcatg gcaagattct gatataaccg gagtaccacg tcatgtagct
      661 gaacataagc ttggtgtgaa tcttaatatc ccaccagtgt gtcaaaagaa aagaggcatg
      721 gctccagatc gaacaaaatt tctcagagaa gaagttaaaa aattggtgga tactagaata
      781 ttgagagaag taaaatatca gacatgggta gcaaacccgg ttgtggtaag aaagccagat
      841 aattcatgga ggatgtgtgt agacttcaca gatttaaata aagcatgtcc aaaagacaat
      901 tatcctttac caaaaatcga ttag
//
LOCUS       XM_071832105             897 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841918), mRNA.
ACCESSION   XM_071832105
VERSION     XM_071832105.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..897
                     /gene="LOC139841918"
                     /note="uncharacterized LOC139841918; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841918"
     CDS             1..897
                     /gene="LOC139841918"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688206.1"
                     /db_xref="GeneID:139841918"
                     /translation="MRSSGCLMAICDVFGYFENAGTNVIGRVANYSEVQDFRNTDKLA
                     VSTDWKNTNVLIDTDHPQIIEFRQRLTQIHSSEDSICSLAHSLLISSARDPNSFLKKA
                     QYVGLDHLNPSMEGIYIIQAIINTILPDDTWYYIACKKCKNSAKPVILNCDLTLDVDQ
                     LLNLEQKCYGCINKSDVVVRFKVPISVENQTSTVSFTVFESVVKKFVTQSAYELMNSL
                     SEDDDYPEEPELLLQKTLLFKIDVGAYNKERGIRNYTVKDATDDPTCFELYESFKVDQ
                     QVVFEDVEIEESSEKLTSFENV"
     misc_feature    352..786
                     /gene="LOC139841918"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(355..357,703..705,709..711,715..717,778..780)
                     /gene="LOC139841918"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(370..378,550..561,565..567,583..591,595..597,
                     700..702,721..726,754..756,760..765)
                     /gene="LOC139841918"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atgcggtcta gtgggtgttt aatggctata tgtgatgtct ttgggtattt tgagaacgcg
       61 ggaactaatg ttattggacg tgtagcaaat tattctgaag tacaggattt tcgaaacact
      121 gacaaactgg cagtttctac cgactggaaa aacacgaacg ttttgataga cactgatcat
      181 ccgcaaatca ttgagttcag acaacgcctc acccaaatcc attcttctga agattccatt
      241 tgttcgttag ctcattcgtt gttaatttct tctgcacgtg atccaaactc ctttttaaaa
      301 aaggctcagt atgtcggttt agatcacttg aacccgtcca tggaaggcat ttatattatt
      361 caggccataa tcaataccat tcttcccgac gacacttggt actacattgc ctgcaagaag
      421 tgtaaaaata gtgctaaacc tgttatcctc aactgtgatc ttaccttgga cgttgatcaa
      481 cttttaaatt tggaacagaa gtgttacggt tgtatcaata agtcggacgt ggtagtgagg
      541 tttaaagtgc cgattagtgt agaaaatcaa accagcacag tgtctttcac tgtttttgaa
      601 tctgtggtga agaagttcgt tacccaatcg gcttatgagt taatgaattc gttgtctgaa
      661 gatgatgatt atcctgaaga gccagaactt cttttacaaa agaccctttt gtttaagata
      721 gatgttggtg cttataacaa agaacgtgga attcgaaact acactgttaa agatgcgacc
      781 gatgacccaa catgtttcga actctatgag agtttcaagg tcgatcaaca agtggttttt
      841 gaagatgttg agattgaaga atcatctgag aaacttactt catttgagaa tgtatga
//
LOCUS       XM_071832106             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At2g35280-like
            (LOC139841920), mRNA.
ACCESSION   XM_071832106
VERSION     XM_071832106.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139841920"
                     /note="F-box protein At2g35280-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841920"
     CDS             1..636
                     /gene="LOC139841920"
                     /codon_start=1
                     /product="F-box protein At2g35280-like"
                     /protein_id="XP_071688207.1"
                     /db_xref="GeneID:139841920"
                     /translation="MNKINNIVDLLPDDLLGEILSRVGQNSSTQLGVARLVCKAFYKQ
                     AHHPLVYQRLSFDRLPVGSWGIPQMIYLYHRCLVNKNPNAIFRRGLLFYFDGKYSQDG
                     LRYLKQASNCQLVEAVYVYGLVMFVSHDVNEKEIGLKIHNHTFPPIPDYVVAVRTKVY
                     DLIHQTWRMNRHPFADVKMRCPISGHNGYLPRRNGCELRNQNACRAFRLMS"
     misc_feature    22..165
                     /gene="LOC139841920"
                     /note="Region: F-box-like; pfam12937"
                     /db_xref="CDD:463757"
ORIGIN      
        1 atgaataaga tcaacaatat tgtcgatctt cttcctgatg atttgcttgg tgaaatatta
       61 tcaagagtcg gacaaaattc ttcgactcag ttgggtgttg ctcgattggt ttgtaaagcc
      121 ttttataagc aagcccatca tccattggtt tatcaaaggc tttcctttga tcgtttacct
      181 gtagggtctt ggggtatccc tcaaatgatt tatctttacc atcgttgttt ggtaaataaa
      241 aaccctaatg cgatttttcg caggggtttg ttattttatt ttgatggaaa atacagccaa
      301 gatggcctcc gttatttaaa acaagcatca aactgccaat tagtagaggc tgtttatgtt
      361 tatggtttgg ttatgtttgt ttctcacgat gtaaatgaaa aggaaatcgg tttaaaaatt
      421 cataatcata cattcccacc gataccggat tatgtggttg ctgtgagaac aaaggtttat
      481 gaccttatac atcaaacctg gagaatgaac cgccatcctt ttgctgacgt gaaaatgagg
      541 tgccctatat ccggccacaa tggttattta ccaagaagaa atgggtgtga attaagaaac
      601 cagaatgcat gtcgtgcttt taggcttatg agttga
//
LOCUS       XM_071832108             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841921), mRNA.
ACCESSION   XM_071832108
VERSION     XM_071832108.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139841921"
                     /note="uncharacterized LOC139841921; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841921"
     CDS             1..441
                     /gene="LOC139841921"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688209.1"
                     /db_xref="GeneID:139841921"
                     /translation="MGDSSSATQINKLDFSDPLYLHSNDITGTPITSIKLKGNENYNI
                     WSRSMKLALSTKSKIGFINGTVVRSKTDAVLASQWDRCNSVVLSWILGSVTEDIYCGQ
                     IFSTNATDAWNELKEIYDTIDTSIIYNLHHQINTLKQSDCSLSE"
     misc_feature    64..201
                     /gene="LOC139841921"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
ORIGIN      
        1 atgggtgata gttcttctgc tacacagatt aataagttgg attttagtga tccactttat
       61 cttcattcta atgatataac tggaacacca attacttcta tcaaattaaa aggaaatgaa
      121 aattataaca tatggagtag atcaatgaaa ttggctctat ctactaaaag taaaattggc
      181 tttattaatg gaactgttgt tagaagtaaa acagatgcgg ttcttgcctc tcaatgggat
      241 agatgcaact ctgttgttct atcttggatt ctgggatctg taactgaaga tatttattgt
      301 ggtcaaattt tttcaactaa tgcaactgat gcgtggaatg aacttaaaga aatttatgat
      361 acgattgata cttctatcat atataactta catcatcaaa ttaatacttt aaaacaaagt
      421 gattgttctc tatctgaata g
//
LOCUS       XM_071832109             696 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841922), mRNA.
ACCESSION   XM_071832109
VERSION     XM_071832109.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..696
                     /gene="LOC139841922"
                     /note="uncharacterized LOC139841922; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841922"
     CDS             1..696
                     /gene="LOC139841922"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688210.1"
                     /db_xref="GeneID:139841922"
                     /translation="MDFLALSIDLLFDSTSSEEEEEIQPRTRFQRQPRRFLNRDREAA
                     GELLWNDYFCENPTFPDDIFKRRFRMRKVLFLRIRDGILQHSYTPNAPDHFTFFQQRP
                     DAIGRLGFSTIQKITCALRQLSYGMTADIFDEYIKMAEKTGYVTLNNFCKCILDLFGR
                     EYLRKPNATDIALLYSAHEKKHGFKRMLGSIDCMHWAWKNYPVAWKGQYTRGDHGHPT
                     IMLEAVASYDMWI"
     misc_feature    481..>693
                     /gene="LOC139841922"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggattttt tagccttaag tatcgatttg ttattcgatt caacgtcgtc cgaagaagag
       61 gaagaaatcc aaccaagaac tcgttttcaa agacaaccac gacgtttttt aaatagagat
      121 cgtgaagcag cgggtgaatt attgtggaac gattactttt gtgaaaatcc gacgtttccg
      181 gatgacattt tcaagagacg atttcggatg cgcaaagttt tatttctccg tatccgagac
      241 ggtattcttc aacactctta tactcctaat gcccccgatc attttacttt tttccaacaa
      301 cgtccggatg caattggacg tcttggtttc tcaactattc aaaaaataac ttgcgcgtta
      361 cggcaattgt cgtatgggat gaccgcggat atatttgatg aatatattaa aatggcggaa
      421 aaaacgggtt atgttacttt aaataatttt tgcaagtgta tacttgactt atttgggcgg
      481 gaatatttga ggaagcctaa tgcaactgac attgctctgt tgtattcggc gcacgagaag
      541 aaacatggtt tcaagagaat gttgggtagt attgactgta tgcattgggc atggaaaaat
      601 tatcccgttg catggaaagg tcaatatacg agaggtgatc acggtcaccc gacgatcatg
      661 cttgaagcgg ttgcttcata cgatatgtgg atatga
//
LOCUS       XM_071832110            1808 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides high affinity nitrate
            transporter 2.3-like (LOC139841923), mRNA.
ACCESSION   XM_071832110
VERSION     XM_071832110.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1808
                     /gene="LOC139841923"
                     /note="high affinity nitrate transporter 2.3-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 52 Proteins"
                     /db_xref="GeneID:139841923"
     CDS             1..1629
                     /gene="LOC139841923"
                     /codon_start=1
                     /product="high affinity nitrate transporter 2.3-like"
                     /protein_id="XP_071688211.1"
                     /db_xref="GeneID:139841923"
                     /translation="MAYPASNPENEEIAPHQPNTNPDHVEITPQQQTTTNPEHVEITP
                     RQTFDLPVDSENKATKMKIFSIAQPHMRAFHLSWLSFCTCVISTFAAAPLVPIIRDNL
                     NLTRSDISNAGIASVSGSILSRLVMGVLCDLVGPRYGCAVINMLAAPVVFSFSFVADA
                     GGYVTVRFMIGFSLATFVSCQYWTSVMFNGKIIGVVNGVSAGWGDVGGGVTQLLMPVL
                     FHFITNMLKATPFMAWRIAFFVPGWFHLIVGALVLVYGQDLPDGNFAQIRKDGQPSKD
                     KFSKVFRNAVTNYRTWVFFLIYGYSMGVQLCLNNVISEYFYDRFDLKLHTAGVVAASF
                     GIANFITRPFGGYASDLSARKFGMRGRLWTLWITQTLGGVFCIWFGQANSLPIAIFAM
                     MLMAAGAQAACGATYGIIPFVSRRSLGILSGLTGAGGNVGGGLTQLLFFSGARFSTAS
                     GLTWMGVMTVVLTVPVAFIHFPQWGSMFIPPSKNEKYNEEYYYSLEYSEEEKELGMHV
                     GSMKFAKNSRAERGRRLVVAVTETPANNTPIHHV"
     misc_feature    118..1542
                     /gene="LOC139841923"
                     /note="nitrate transmembrane transporter; Provisional;
                     Region: PLN00028"
                     /db_xref="CDD:177665"
ORIGIN      
        1 atggcttacc cagcctccaa tcccgaaaac gaagaaatcg cgccacatca gccaaacacc
       61 aatcccgacc acgtagaaat cacgccacaa caacagacaa ccaccaatcc cgaacacgta
      121 gaaatcacgc cacggcaaac ctttgatctg cccgtggatt ccgaaaataa agctacaaag
      181 atgaaaatat tctcaatagc gcaaccacat atgagagcat tccatctttc ttggctctct
      241 ttttgcactt gtgttatttc cacatttgct gcagcccctc ttgttcccat tattcgggac
      301 aaccttaacc tcactcgttc ggacatttca aacgctggaa tcgcctctgt ctccggcagc
      361 attctctcac gacttgtcat gggagtactt tgtgaccttg tgggtcctag gtacggttgt
      421 gcggtgatta acatgttggc ggctccagtc gttttcagtt tttcttttgt ggcggatgct
      481 ggtggttacg tgacagtcag gttcatgatt gggttctcat tagcgacgtt tgtgtcttgt
      541 caatattgga cgagtgtgat gtttaatggg aagataattg gggtggtgaa tggggtttca
      601 gcaggatggg gtgatgttgg aggtggggtc acgcagcttc taatgccggt gctctttcat
      661 tttataacta atatgcttaa agcgacaccg tttatggcat ggaggattgc tttttttgtt
      721 cctggttggt ttcatttgat tgtaggcgct cttgttttgg tttatggaca agatttgcct
      781 gacggaaact ttgcccaaat tcgaaaggat ggacaacctt caaaggataa attctctaag
      841 gtgttccgaa atgcagtcac aaattacagg acatgggttt ttttcttgat ctatggttat
      901 tcaatgggag tgcaattgtg cttaaacaat gtcatctcgg aatacttcta cgataggttc
      961 gatttaaagc ttcacacagc cggagtagta gcagccagtt tcggcatcgc taatttcatt
     1021 actcgtccat tcggtggtta cgcatccgac ttatcagctc gtaaattcgg aatgcgaggc
     1081 agattatgga cactatggat cacacaaacc ctaggaggtg ttttttgtat atggttcggt
     1141 caagctaact cattacctat cgcgattttc gcaatgatgc taatggctgc cggagcacaa
     1201 gccgcttgtg gcgcaactta cggcataatt cccttcgttt caagacggtc tctcggtatt
     1261 ctatccggtt tgaccggagc cggtggcaat gtaggtggtg gtttgactca actactgttt
     1321 ttctccggtg ctaggttttc gacggcatcg gggctaacat ggatgggtgt gatgacggtg
     1381 gttctaacgg tgcccgtggc gtttattcat ttcccacaat ggggaagcat gtttatacca
     1441 ccatcaaaga atgaaaaata taatgaagag tattattata gtttggagta tagtgaagaa
     1501 gagaaagaat tgggcatgca tgtaggaagt atgaagtttg ccaagaatag tagggcggag
     1561 cgtgggcgga gattggtggt ggccgttact gaaactccgg cgaataatac gccgatccac
     1621 catgtttgaa gacgtgatat actaataaaa aataagtcaa gtggggttaa gttgtttata
     1681 tgaagaagta aagaaaacga atttgagttg tggttgtata ggcaaccgtg cttatattat
     1741 agcaactagt gcttattata agattacctc gatctcgatc tagtgacctt cttcttatca
     1801 caaggctc
//
LOCUS       XM_071832111             489 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841924), mRNA.
ACCESSION   XM_071832111
VERSION     XM_071832111.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..489
                     /gene="LOC139841924"
                     /note="uncharacterized LOC139841924; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841924"
     CDS             1..489
                     /gene="LOC139841924"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688212.1"
                     /db_xref="GeneID:139841924"
                     /translation="MHEEGSSRNQTTWDADDELHLAQCWIHVSENSIVGCAMTGKTFW
                     YQIVEEYSKHNPPCARTKDALSSKWTKLNNDCNKYNGIVNRLNTAWRSGENDNIFCTR
                     SDDQFRFKMGKSFPSYKAWDFLQDKPKWLHPDPVVIGRRNKRVPDPVVDETIAKTDFD
                     LN"
ORIGIN      
        1 atgcacgaag aaggttcgag ccgcaaccaa accacgtggg atgccgatga cgagttacat
       61 ttggctcaat gttggataca tgtttctgag aactcgattg taggatgcgc aatgaccggg
      121 aaaacctttt ggtaccaaat tgttgaagaa tacagcaaac ataatccacc atgtgctcgt
      181 acgaaagatg cattgtcttc gaagtggacc aagttgaata atgattgcaa taagtataat
      241 ggtattgtga accgtttgaa tacagcatgg aggagcgggg aaaatgataa cattttttgc
      301 actaggagtg acgatcagtt taggttcaag atggggaaga gttttccaag ttataaggcg
      361 tgggactttt tgcaagacaa accaaagtgg ctacatcctg atcccgttgt tattggtagg
      421 cgaaacaagc gagtgcctga tcccgttgtt gatgaaacta tagctaaaac tgattttgac
      481 ttgaactga
//
LOCUS       XM_071832112             495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841925), mRNA.
ACCESSION   XM_071832112
VERSION     XM_071832112.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139841925"
                     /note="uncharacterized LOC139841925; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841925"
     CDS             1..495
                     /gene="LOC139841925"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688213.1"
                     /db_xref="GeneID:139841925"
                     /translation="MRIGYYWPSMYRDAAEANGQCEVTNRDIVLGIKARLGLCRRGWI
                     DELPNVLWAHRTNPKGVTNETPFSLVYGSEAVIPAEINVPTLRITSFDESSNIEELCE
                     NLNLVEERREMVAIKEAINKQRIASYYNKRVQPLSFQLDDLVWRKNEASRAEDTGNLG
                     PKWE"
ORIGIN      
        1 atgcggattg gatattactg gccgtcaatg tacagagatg ccgcagaggc gaatggtcaa
       61 tgtgaagtta cgaatcggga tatcgtttta ggaatcaaag caaggctggg attgtgtcga
      121 aggggttgga tagatgaatt gcctaacgtt ttgtgggcgc accgcacaaa tccgaagggt
      181 gtaactaatg aaacaccctt tagtttggtg tacgggtccg aggctgtaat acccgccgaa
      241 ataaatgtgc caaccttgcg cataacatcc ttcgatgaaa gtagcaacat cgaagaactg
      301 tgtgaaaatc taaacttagt tgaagaacgc agagaaatgg tggcaataaa agaagcaatc
      361 aacaaacaaa gaatcgcaag ctactataat aagcgcgtcc aaccattatc cttccaattg
      421 gatgatctgg tgtggcgaaa aaacgaagca agcagggcag aggatacggg taatcttggg
      481 cctaagtggg aatga
//
LOCUS       XM_071832113             696 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841926), mRNA.
ACCESSION   XM_071832113
VERSION     XM_071832113.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..696
                     /gene="LOC139841926"
                     /note="uncharacterized LOC139841926; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841926"
     CDS             1..696
                     /gene="LOC139841926"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688214.1"
                     /db_xref="GeneID:139841926"
                     /translation="MHTDGACGPEGAGAGIVLKSPEGEEYTFALRFSFSVTNNEAEYE
                     SLLSGMREEKYLEVKELSVYVDSQLVANQFNGIFEAHDESMKKYLKLVQELAVDFDLF
                     QITQVSRTLNKKAVALSKLAALTFSHFKKEIWVEEVKVKSIEEDSVSAAVEEEDWSWM
                     TPIIEFLTKGMFPIDSSEVRKIKMKAPMYLLDKGVLYRKSFLGPHLRCLNPTQAESII
                     REVHERMCALRPK"
     misc_feature    1..369
                     /gene="LOC139841926"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(10..21,109..117,124..126,196..198,316..318,358..360)
                     /gene="LOC139841926"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgcacacag atggggcttg tggtccagaa ggcgcagggg caggaatagt cctaaaaagt
       61 ccagaagggg aagagtatac cttcgcacta cgatttagct tctctgtcac aaataatgaa
      121 gctgaatatg aatcattgtt atctgggatg cgggaagaaa aatatctgga ggttaaagaa
      181 ctatcagtat atgttgattc gcagttggtt gcaaaccaat ttaacggaat attcgaagca
      241 cacgatgagt cgatgaaaaa atacttaaag cttgtgcaag agctagcagt cgacttcgat
      301 ttattccaga taactcaggt ttcgaggacg ctgaataaaa aggcagttgc gctaagtaag
      361 ttagccgcat taacattcag tcattttaag aaagaaattt gggttgagga agttaaagta
      421 aaatctattg aagaagacag tgtttcggct gcggttgaag aagaagattg gagttggatg
      481 acaccaatta tagaatttct aaccaaaggt atgtttccga tagattcaag tgaagtaaga
      541 aagattaaga tgaaagcacc aatgtatctg ttagacaagg gagtcctata cagaaaatct
      601 tttctggggc ctcacttgcg gtgtctcaat ccaactcaag cggagtcaat tataagggaa
      661 gtacacgaga gaatgtgcgc actgcgtcca aaataa
//
LOCUS       XM_071832114            2850 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841927), mRNA.
ACCESSION   XM_071832114
VERSION     XM_071832114.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2850
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2850
                     /gene="LOC139841927"
                     /note="uncharacterized LOC139841927; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841927"
     CDS             1..2850
                     /gene="LOC139841927"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688215.1"
                     /db_xref="GeneID:139841927"
                     /translation="MQGQKAKQSLELAPTTEKFVPHIANHPFTIAPVLPLTLGSYDGL
                     SDPDDFLQKFEGTARTHSWSDAVACHMLPIVLQGVAREWFNNLPAQSITGFADLRSRF
                     LLNFHNLRARKRTHVECHDIKQKSKESLGEIIDRYTKEVAKIQNLPESQKVSGFIHCI
                     DADRHLSLWQRLQRRVPETFAEAVKEKHDYMRAQEDIKHNCGNTSSNMDIDDDYYRVQ
                     GRGSELGKRYGGNGQPRGGTYHNDKYRKFNNNKGGGSQRFKSSHAENVALIKDLTKTP
                     KEILATEAVCKSFDPPVPLSKYYGNRDRSKFCDFHDDYGHETNECRHLIEKVVAELKK
                     GRLQHLKKSARAQADKPKGEKEYPWQKKNEGNEMDKTINMATSGRIYQRRKFEVSEEW
                     ENTPITFSTIAQEPSDAPITIKGRVKSCRYIIKRLNVDTGCGVDIMYEHCFRLLPGAV
                     TANQVAPNTALSGFSGESAWAIEIIELELELVDDDNKELVRSTTVEFAVVRSYSKYNA
                     LLGRTTLQKLAAILIKFPTPLGIATIRSEKQDASVAAVEHAEQQPSEAEQLRSCMIIA
                     NPGYPEQKIKIGGGLSDETKFKLRNILASNTDVFSWKEADMTGVPREIAEHKLNANPS
                     LTPVPQKKCGMAPERSEWLKAEVDKLIKVNILREVRYPTWVANSVLVKNPDGSWCMCV
                     DFTDINKACPKDNYPLPEIDWKVESLAGFRYKCFLDAYKVYHQIQMVADDEDKTAFHT
                     SQGIYCYTKMPFGRVLSNAVATYQRVIDEAFKGQIGRNLEAYVDDLVIKSTTEQGLLE
                     DILETFASLRKINMKLNPSKCSFGEEEGKFFGHIITERGIRVNPKKIEAIENMSSPRN
                     KKEVQSLMGKLAALTRFLSKSAERSLPFFRTLKNCLKKMDFKWTEEAEVAFQEIKNLL
                     KELPTMTAPIAGETLILYLAASKEAISSVLIAYRG"
     misc_feature    208..474
                     /gene="LOC139841927"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1963..2499
                     /gene="LOC139841927"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(2152..2169,2254..2259,2344..2346,2350..2355,
                     2485..2490)
                     /gene="LOC139841927"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(2152..2169,2254..2256,2350..2352)
                     /gene="LOC139841927"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    2257..2259
                     /gene="LOC139841927"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    2695..>2832
                     /gene="LOC139841927"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atgcaagggc aaaaagctaa gcaaagtctt gagctagctc ctacaacaga aaagtttgtg
       61 ccacacatcg ccaatcatcc cttcacaatt gcaccggtgt tgcctctaac actcggaagt
      121 tatgatgggt tatctgatcc ggatgacttt ttacaaaaat ttgaaggaac tgcaagaaca
      181 cacagttgga gtgatgcagt agcatgccat atgctaccaa tagtgttgca aggagtggca
      241 agggaatggt tcaataattt gccagcccaa agcattacag gttttgcgga tttgcgctca
      301 aggtttttat tgaactttca caatttgcgc gcacgcaaaa gaacacatgt cgaatgtcac
      361 gacattaagc agaaatcgaa agagagcttg ggagaaataa tagacagata tactaaagag
      421 gtggctaaga tacaaaactt gccagaaagc cagaaggtat ccggctttat tcattgtata
      481 gatgctgaca gacacctgtc tttgtggcaa cggttacaaa gaagagtgcc tgaaactttc
      541 gcggaagccg taaaagaaaa gcatgactac atgcgggcac aagaagatat aaagcataat
      601 tgcggaaata cctcttcaaa catggacatc gatgatgatt attatcgagt gcagggaaga
      661 ggttcggagc tgggtaaacg ttatggtggt aatggccaac ctaggggtgg tacctatcat
      721 aatgataagt atcgcaagtt caacaacaat aaagggggag gaagccagag gttcaaaagc
      781 agccatgctg aaaatgttgc attaataaaa gacctcacca aaacaccaaa agaaattttg
      841 gctacagagg cagtgtgcaa aagctttgat cccccagtgc ctttgtcaaa gtattatgga
      901 aacagagaca gaagcaaatt ttgtgatttt cacgatgatt acggtcatga gaccaatgaa
      961 tgtcggcact taattgaaaa agttgttgct gaactcaaaa aaggaagatt gcaacacttg
     1021 aagaaaagcg caagagcaca agctgacaag ccaaagggag aaaaagaata tccgtggcaa
     1081 aagaagaatg agggaaatga aatggataaa accataaaca tggcaaccag cggacggata
     1141 tatcagaggc gcaagtttga ggtatctgag gaatgggaaa atactcccat cacattctcg
     1201 accatagcac aggaaccctc ggatgcgccc attacaatta aaggacgtgt caaaagttgc
     1261 aggtacatca tcaagcgatt gaatgtagac accggttgcg gtgttgatat aatgtacgag
     1321 cactgttttc gcttgttacc aggggctgtc acagccaatc aagtggctcc taacactgcg
     1381 ttatcaggat tttctggtga gtccgcatgg gcaatcgaga tcattgaatt agagttggag
     1441 ctggtggacg atgataataa ggaattagtg agaagtacga cagtagaatt tgccgtcgta
     1501 aggtcgtact caaagtataa tgcgctcttg ggtcgcacga ctttgcaaaa attagcagct
     1561 atccttatca aattcccaac accattggga attgcaacga tcaggtcaga aaagcaagat
     1621 gcaagcgttg cggccgtgga acatgcagag cagcagccga gtgaggcaga gcaacttaga
     1681 agctgcatga tcattgcaaa cccagggtat ccagagcaga aaattaaaat tggcggagga
     1741 ttgtctgatg agacgaagtt taagcttcgc aatatattag cttctaacac agacgtattt
     1801 tcttggaaag aagcagacat gacgggtgta ccaagggaaa ttgctgagca caagcttaat
     1861 gcaaatccta gtctgacgcc agtaccacaa aagaaatgcg gcatggctcc tgaaagaagc
     1921 gaatggttga aagcagaagt cgacaagttg atcaaagtaa acatcttgcg agaagtaagg
     1981 tatccaacat gggtagcaaa ctcagtgttg gtaaaaaatc ctgatgggtc ttggtgtatg
     2041 tgtgttgact tcacggatat taataaagct tgccctaagg acaattatcc actgccagaa
     2101 atagactgga aagttgaatc gttagctggc ttccgataca aatgtttcct agatgcgtac
     2161 aaagtatacc atcaaataca gatggtagcg gacgatgagg ataagactgc tttccacaca
     2221 agtcaaggca tatactgtta tacaaagatg ccatttggac gggtcctttc aaatgctgta
     2281 gcaacttacc aacgggtaat agatgaagct ttcaaaggtc agattggaag aaatttagaa
     2341 gcatatgttg acgacctggt cataaaaagc acaacagaac aaggtttgtt ggaggacata
     2401 ttagaaacgt ttgcttcgtt aagaaaaatt aatatgaagc ttaacccatc gaagtgcagt
     2461 tttggggaag aagaagggaa gttttttggt catataataa ctgagcgagg gatacgtgta
     2521 aatccaaaga aaatagaggc aatcgagaat atgtcgtcac caagaaataa aaaagaagtg
     2581 caaagcttaa tgggtaagtt ggcggccttg acaaggttcc tatccaaatc cgcagagcgg
     2641 tcactcccct ttttcagaac attgaagaat tgcttgaaga aaatggactt caagtggacg
     2701 gaggaagcag aagtggcgtt tcaagaaata aaaaatttgc taaaagagct gccaacaatg
     2761 actgcgccaa ttgctggaga aacgttgata ctgtacttag cggcatcgaa ggaagcaata
     2821 agttcagtgt tgatagcgta cagaggatag
//
LOCUS       XM_071832115            1011 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heavy metal-associated
            isoprenylated plant protein 3-like (LOC139841928), mRNA.
ACCESSION   XM_071832115
VERSION     XM_071832115.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1011
                     /gene="LOC139841928"
                     /note="heavy metal-associated isoprenylated plant protein
                     3-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139841928"
     CDS             1..1011
                     /gene="LOC139841928"
                     /codon_start=1
                     /product="heavy metal-associated isoprenylated plant
                     protein 3-like"
                     /protein_id="XP_071688216.1"
                     /db_xref="GeneID:139841928"
                     /translation="MAKKTNQNNDHKDKNATVREGDGVGSEKKQKAAGVMVVILKIDL
                     HCEGCAGRVVKVVRTLDGVESVRIGDNELNKLTVIGNVDPVKLRQKVEEKTKKKVELI
                     SPATKKTNDGGGGDRCGGKDDKNEQTKLDKTKTVVVNKDNKKPQELPVTTAVFQVSLH
                     CQGCVSRIRKLVSKTKGFVEMSFDKNKDLVTVKGAIDMQLLLAALQQKLKRVVEIVPI
                     KKDDGDGGSEKKRKGGGGGEKGKGGGGNDGEGKGDNGGKKKGKGPGGDNDGDGNGGGG
                     GCDSGSGKAEEVYKMESYVDRIGYPIGYPYPHTLYGPRYVDYVHAPQLFSDENPNACL
                     VM"
     misc_feature    112..267
                     /gene="LOC139841928"
                     /note="Heavy-metal-associated domain; Region: HMA;
                     pfam00403"
                     /db_xref="CDD:459804"
     misc_feature    460..>594
                     /gene="LOC139841928"
                     /note="Heavy-metal-associated domain; Region: HMA;
                     pfam00403"
                     /db_xref="CDD:459804"
ORIGIN      
        1 atggccaaga aaactaacca aaacaatgac cacaaagata aaaacgccac cgttagagaa
       61 ggagacggtg taggtagtga aaagaagcaa aaagctgccg gagttatggt ggtaattcta
      121 aaaatcgact tacattgtga aggttgcgcc ggcagagttg tgaaagttgt tcgtacactc
      181 gatggtgttg agtctgtgag aataggtgac aatgagttaa acaaactaac agtgatcgga
      241 aacgttgatc cggtcaaact acggcaaaaa gttgaagaaa aaactaagaa aaaggtggaa
      301 cttatatctc cggcgactaa aaaaactaat gacggcggag gcggcgacag atgtggaggc
      361 aaagacgata aaaatgaaca aacgaaactt gataagacaa aaactgttgt agtgaataaa
      421 gataacaaga agccacaaga gctaccggtg actacagcag tatttcaggt ttcgttgcat
      481 tgtcaaggtt gtgtgagtcg gattcgtaaa cttgttagca aaactaaggg ttttgtggaa
      541 atgtcgtttg ataagaataa ggatttagta acagttaaag gtgcaattga tatgcagtta
      601 ttgttggctg ctttgcaaca aaaattgaaa agagtggtgg agattgttcc gatcaagaaa
      661 gacgatggtg atggcggaag tgagaaaaaa aggaaaggtg gtggcggtgg agagaagggg
      721 aagggcggtg gtggtaatga cggcgagggt aagggagaca atggtggtaa gaagaagggg
      781 aaaggacccg gcggtgataa tgacggagac gggaatggag gcggcggtgg ttgtgacagc
      841 ggtagtggta aggcggagga agtgtataaa atggaaagtt acgtggatcg tattggatat
      901 ccaatagggt atccgtatcc gcatacttta tacgggccac gttacgtgga ctatgttcat
      961 gcacctcagt tatttagtga tgaaaatcct aatgcttgtc ttgttatgtg a
//
LOCUS       XM_071832116             471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841929), mRNA.
ACCESSION   XM_071832116
VERSION     XM_071832116.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..471
                     /gene="LOC139841929"
                     /note="uncharacterized LOC139841929; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841929"
     CDS             1..471
                     /gene="LOC139841929"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688217.1"
                     /db_xref="GeneID:139841929"
                     /translation="MKLWERVIDTKLRRETKMTENQLDFMPGRSSIEAIHIIKNLMEK
                     YREKQKNLHMAFLDLKKAYECVPRELIWKILNDRGIPSSYIRAIQDMYDGAKSCVRTH
                     DSIPWCLIFVDDIVLVSEIKEELNRRLGQWREVLERNGLRDSRQKTENLRCTLR"
     misc_feature    1..462
                     /gene="LOC139841929"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(172..189,337..339)
                     /gene="LOC139841929"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    235..237
                     /gene="LOC139841929"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgaagcttt gggagagagt gatcgatact aagcttcgac gtgagacaaa gatgactgag
       61 aaccaattag atttcatgcc agggcgttct tcgattgagg cgattcatat cattaagaac
      121 cttatggaga agtatagaga aaagcaaaag aacttacaca tggcgttctt agacttgaaa
      181 aaagcatatg aatgtgttcc acgtgagttg atatggaaga tcctcaatga tcggggtatc
      241 ccaagtagtt acatcagagc tattcaagat atgtatgacg gtgcaaagtc ttgtgttcgg
      301 acgcatgaca gcatcccatg gtgcttgatt tttgttgatg atattgtttt agtatcagaa
      361 atcaaggagg agctaaatag aagacttggg caatggaggg aggtcttaga aagaaatggt
      421 ttacgagaca gtagacaaaa aactgaaaat cttagatgca cactcaggta g
//
LOCUS       XM_071832117             834 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841930), mRNA.
ACCESSION   XM_071832117
VERSION     XM_071832117.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..834
                     /gene="LOC139841930"
                     /note="uncharacterized LOC139841930; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841930"
     CDS             1..834
                     /gene="LOC139841930"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688218.1"
                     /db_xref="GeneID:139841930"
                     /translation="MKILSLNIRGFAVKGKFGWVHSICIKERPCIAVFQETKSKCVSD
                     KWVNALWGDTNFGFIQKEAIGKSGGLLVIWDKGSIEDIEATGGDYFLALRGKWKKSGE
                     ESIVVNVYGPHSDHKKKLMWDSLDRLINSTDSSWLLCGDFNEVRNSSDRLNSQFHQCR
                     ADRFNEFIYRNKLIEIPISGRKFTRISDDGVKFSKLDRFLVSDRFISLWDDLSIITLD
                     RNLSDHCPLILRDKLIDYGPKPFKVFDEWFNYVDVDKVIIEAWKQPVKGVKKIVFLEI
                     V"
     misc_feature    7..690
                     /gene="LOC139841930"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,106..108,328..330,421..423,427..429,589..591,
                     667..672)
                     /gene="LOC139841930"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(106..108,667..669)
                     /gene="LOC139841930"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(328..330,427..429,670..672)
                     /gene="LOC139841930"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaagattc tttcacttaa cattcgtggt tttgcggtta agggcaagtt tgggtgggtg
       61 catagtattt gtattaaaga aagaccatgt atagcggtat ttcaagaaac caagagtaaa
      121 tgtgtttcgg ataaatgggt aaatgccttg tggggggaca caaattttgg gttcattcaa
      181 aaggaggcca taggaaaatc ggggggttta ttagtcattt gggataaagg ttccattgaa
      241 gatattgagg caacgggcgg tgattatttt ttagctttaa gaggcaaatg gaagaagtcg
      301 ggtgaagagt ctattgttgt caatgtgtat gggccacata gtgatcataa gaaaaaattg
      361 atgtgggatt cattagatag gcttattaat agtactgact caagttggtt gttgtgtggt
      421 gattttaatg aggttagaaa tagttcggat aggttaaatt ctcaattcca ccaatgtaga
      481 gccgatagat tcaatgagtt tatatatagg aacaaattga ttgagatccc gattagtggt
      541 aggaaattta cgcgtattag tgatgatggg gtaaaattta gtaaacttga taggtttttg
      601 gtctcggata gattcattag tttgtgggat gacctttcta ttattacttt agaccgtaat
      661 ctctcggatc attgtccatt aattcttcgt gataaactta ttgattatgg tccaaagcct
      721 tttaaagttt tcgatgaatg gttcaattat gtggatgttg ataaggtaat cattgaggcg
      781 tggaaacaac cggttaaagg tgtgaaaaag attgtatttt tagagatcgt ttaa
//
LOCUS       XM_071832118            1137 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841931), mRNA.
ACCESSION   XM_071832118
VERSION     XM_071832118.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1137
                     /gene="LOC139841931"
                     /note="uncharacterized LOC139841931; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841931"
     CDS             64..1095
                     /gene="LOC139841931"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688219.1"
                     /db_xref="GeneID:139841931"
                     /translation="MGRAPCCDKANVKKGPWSSEEDEKLREFINKHGTVGNWIALPHK
                     AGLKRCGKSCRLRWLNYLRPNIKHGEFSEDEDKIICSLYANEAKPHWLYASIGSRWSI
                     IAGQLPGRTDNDIKNYWNTKLRKKLMAMLPSYQKKPSFYPSINPLQSPNNFLNIASSS
                     SFYNPNFINNVSNNLISTSSFIDNHIYVNDLIQPPPQPPSSSNSFSCMFLNNNYNLGF
                     QDQDMNKEYYYPQVKERMLMFGGDQNSHKDHIIKQEDQFAPEGFGDLTPNYEFMTDHN
                     NNFVDQKPKGYFKNLEELKQVIDIKNNSCSINFNINSYLMTEDNNDDENKTTHNNITD
                     EYYMIQYND"
     misc_feature    64..>444
                     /gene="LOC139841931"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03091"
                     /db_xref="CDD:215570"
ORIGIN      
        1 ataaaggtca accataaagt gatacacata cttacaatat aaaaaaaaca taaaataata
       61 ataatgggaa gagctccttg ttgtgacaaa gcaaatgtca aaaaaggacc atggtcttct
      121 gaagaagatg aaaaacttag agagtttatt aataaacatg gtactgttgg taactggatt
      181 gctcttcctc acaaagctgg tttgaagaga tgtggtaaga gttgtaggtt gagatggcta
      241 aattatctta gaccaaatat taaacatggt gagttttctg aagatgaaga taaaatcata
      301 tgcagtttgt atgccaatga ggcaaagccc cattggctgt atgccagcat tgggagcaga
      361 tggtcaataa tagcaggtca actaccagga agaactgata atgatatcaa gaattactgg
      421 aacacaaagc ttagaaagaa gcttatggct atgcttcctt cttatcaaaa gaaaccatct
      481 ttttaccctt ctattaatcc acttcaatca ccaaataatt tcttgaatat tgcttcttca
      541 tcatcttttt acaaccctaa tttcataaat aatgttagca acaatttgat cagcactagt
      601 agctttattg ataatcacat ttatgttaat gatctcattc aaccaccacc acaaccacca
      661 tcatcatcaa attctttcag ttgtatgttc ttaaacaata actataatct agggtttcaa
      721 gatcaagata tgaacaaaga gtactactac ccacaagtga aagaaaggat gctaatgttt
      781 ggtggagatc aaaacagtca caaagatcat ataatcaagc aagaagacca atttgcccct
      841 gagggttttg gagatctaac tccaaattat gaatttatga cagatcataa caataacttt
      901 gttgatcaga aaccaaaagg gtatttcaag aatcttgaag aactgaaaca agtgattgat
      961 atcaagaaca acagttgtag tatcaatttt aacatcaaca gctacttgat gactgaagat
     1021 aataatgatg atgaaaacaa gacaacacat aataatatta ctgatgaata ttatatgata
     1081 cagtataatg attgatggga gtaactagct aagtgactgt tttgctgttg taattaa
//
LOCUS       XM_071832119            1206 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841932), mRNA.
ACCESSION   XM_071832119
VERSION     XM_071832119.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1206
                     /gene="LOC139841932"
                     /note="uncharacterized LOC139841932; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841932"
     CDS             1..1206
                     /gene="LOC139841932"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688220.1"
                     /db_xref="GeneID:139841932"
                     /translation="MDPKLLHIQETTQGLLGTYKLLVSGLWLSVITKKPQPIPMAKTA
                     QTPIPVVDNKNYVYLNELEVGKHAVVKLNAKNNISHHFITLLKEGCVYLLKHFEVIPN
                     REEYRILKDNKMMIQLQGATYLKKHTITATSTFIWHLFDCIEIEDLVPTDDKYLVDFA
                     GHVINVGSPKDQRTGAATLDFDLANERGQKMTVTLWGKLGPDFLEKKPASPAIHCITL
                     TSVFVKKNYFEYKWHAFSSSMDLPGDDEYCSPVRHFPLPKEGTLAELLDMVRKRMNNV
                     LDVFKCQVELTDIRMKNGWYYTTCSICKSKKGKSRKFQGFCRQICNVRLTFELKRFRI
                     EFEVRNATVETVVLLFDKTVEQLTNITAQCLLVELDKDCVAKRPGQPAQHHEGSTVKG
                     KLILQPWYL"
     misc_feature    <241..366
                     /gene="LOC139841932"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    832..>1116
                     /gene="LOC139841932"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
ORIGIN      
        1 atggatccta agctcctgca catccaagaa accacccaag gtttgttagg tacctataaa
       61 ttgttggtat ctggtctatg gttatccgtc attaccaaaa aaccacaacc tattccaatg
      121 gctaaaactg cacaaacacc cattccagtt gttgacaaca aaaattatgt ataccttaat
      181 gaacttgagg ttggaaagca cgctgtggtg aagcttaatg caaaaaataa catctcacac
      241 catttcatca cgctcttgaa ggaaggctgt gtgtatttac tcaagcactt tgaagtgata
      301 cccaacagag aggagtaccg tatcttaaag gacaacaaaa tgatgataca gttgcaaggt
      361 gcaacatact tgaagaagca tacgatcact gccacatcca cttttatctg gcacctgttt
      421 gattgcattg aaattgaaga tttggtgccc accgacgaca aatacttagt tgattttgca
      481 gggcacgtta taaacgtagg gtcacccaag gatcagagga ctggtgcggc aacgctggat
      541 tttgacctcg ccaatgaaag gggtcaaaag atgacagtca cgctttgggg gaagcttggt
      601 cctgatttcc tcgagaagaa acctgcatcg cctgcgatac actgcatcac tttaacgtcg
      661 gtgtttgtga aaaagaacta ctttgaatac aaatggcatg ctttttcgag ttcaatggac
      721 cttcccggag acgacgaata ttgttcccca gtgcggcatt tcccattacc taaagagggt
      781 accctcgctg agctgctgga catggtgcga aaaaggatga acaatgttct tgatgttttc
      841 aaatgtcaag tcgagctcac cgatatccgg atgaagaatg gttggtacta tactacctgt
      901 agcatatgca agtcaaagaa gggcaaatca aggaagtttc agggtttttg caggcaaatt
      961 tgcaatgtac gccttacatt tgaacttaaa aggtttagga ttgagttcga ggtgaggaat
     1021 gcgacggtcg agactgtagt attgctgttt gacaagactg tggagcagtt aacaaacata
     1081 acagcacaat gtctcttagt tgagcttgat aaggactgtg ttgccaaacg ccctggccaa
     1141 cctgctcaac accacgaagg ttctactgtt aaaggtaaac tcattctaca accatggtac
     1201 ctatga
//
LOCUS       XM_071832120             819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841933), mRNA.
ACCESSION   XM_071832120
VERSION     XM_071832120.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..819
                     /gene="LOC139841933"
                     /note="uncharacterized LOC139841933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841933"
     CDS             1..819
                     /gene="LOC139841933"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688221.1"
                     /db_xref="GeneID:139841933"
                     /translation="MVKMERELQNLKLVGTNLASYNRRFFEVALMHDPGDCIKRCDKC
                     KKNGHLATECKAGTNVYYGCRKTGHFRKDCPTTTKNTEPARGRAFNINSIEARDDPKL
                     VTGTFLLDNHHAYVLFESGADRSSVSRDFCHNLKNPVSSLENLYSIELGNGNLMRADK
                     VYRDCTLILARTSFRIDVISIKLGSFDLVVGMDWLPENRAYIVCDEKAIHIPVTEDEP
                     LMVYGERSKKLEDVLIVRDFSDIFPNELPGLLPHRDVEFQIDLMPGVAPVARAP"
     misc_feature    121..>249
                     /gene="LOC139841933"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    250..627
                     /gene="LOC139841933"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(355..357,361..363,367..369,442..450,565..567)
                     /gene="LOC139841933"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    355..363
                     /gene="LOC139841933"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    355..357
                     /gene="LOC139841933"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(442..453,463..474)
                     /gene="LOC139841933"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggttaaga tggagcggga actccagaac ttgaaactgg ttggtactaa tttagccagc
       61 tataatagga gattctttga ggttgctctt atgcatgacc cgggagattg cataaagcgg
      121 tgtgataagt gtaagaagaa tggacacctg gccacagaat gtaaagctgg tacaaatgtt
      181 tattatggat gtaggaaaac tggtcacttt agaaaggatt gtccaactac aactaagaat
      241 actgaacctg ccagaggaag agctttcaac atcaactcca ttgaagctcg tgatgatcct
      301 aagttagtca cgggtacttt tttactcgat aaccatcatg cttatgtact ttttgaatct
      361 ggagctgata ggagttctgt ttccagagat ttttgccata atcttaagaa tcccgtatca
      421 tcattagaaa acttgtactc tatagaacta gggaacggta atctaatgag agctgataag
      481 gtctatcgtg attgtacttt gattttggct agaacgtctt ttagaataga tgtgatatcg
      541 attaagctgg gaagttttga ccttgtagtt ggaatggact ggttacctga gaatagagcc
      601 tacatcgttt gcgacgagaa agcgattcac atacctgtta ccgaagatga gcctctaatg
      661 gtgtatggag agcgaagcaa gaaactcgaa gatgtgctga tcgttagaga cttttccgat
      721 atttttccga acgagttacc cggattgcta ccacatagag atgtagaatt ccagattgac
      781 ttaatgcctg gagtggcacc tgtggcgcgc gcaccgtaa
//
LOCUS       XM_071832121             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841935), mRNA.
ACCESSION   XM_071832121
VERSION     XM_071832121.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139841935"
                     /note="uncharacterized LOC139841935; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841935"
     CDS             1..780
                     /gene="LOC139841935"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688222.1"
                     /db_xref="GeneID:139841935"
                     /translation="MQIPNVLQFTWSWSRLPSRRTEIELIELQKMLIDYSFIHSESDS
                     WSCNLQPNGLFSVENLTHQIDGKLQCKQSGMNKTMSNKLLPQKICIFVWRVMLRRIPV
                     RVELDKCGIDLDSLRCSVCNDNIETVEHILIDYAFAKDLWERVSRWWNSSIPIHSSLE
                     ERFKGIRGNVNPNLTNTSSVFRQAIEWVCGYVIWQNRNHVIIRKKKGNGPLALMEIQT
                     RSFEWLSSRSKKVKIYWNQWLLNPSYFGDLGWHQRYFSSID"
     misc_feature    <223..423
                     /gene="LOC139841935"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcagatac caaacgtgct gcaatttact tggagttggt ctcgattgcc ttcaagaaga
       61 acagaaatcg aactcatcga acttcaaaag atgctgattg attacagctt tattcacagt
      121 gaatcagact catggagctg caatcttcaa ccgaatggtt tgttctctgt tgaaaatttg
      181 actcatcaaa tcgacggaaa gcttcaatgc aaacaatcag gtatgaacaa aactatgtct
      241 aacaaattgc tacctcaaaa gatatgcatc ttcgtatggc gtgtaatgtt gcgaagaata
      301 cccgttcgag tggaattgga caaatgtggt atagatcttg attcactgag atgctcggtc
      361 tgtaatgata atattgaaac agtcgaacat atattaatcg attatgcttt tgcaaaagat
      421 ctatgggaaa gggtatcgcg ctggtggaac tcatctatac cgattcactc gagcttggag
      481 gaaagattca aaggaataag aggtaatgtg aatccaaact taacgaatac atcttctgtc
      541 tttcggcaag caatcgaatg ggtgtgcggg tatgtaattt ggcaaaatag aaatcatgtc
      601 attattcgga agaaaaaagg taatggacct ctagcattaa tggagattca aactagatca
      661 ttcgaatggt tatcaagtcg atcgaagaaa gtcaagattt attggaatca atggttatta
      721 aacccgagct attttggaga tcttggctgg catcaaagat atttttcaag tatagattag
//
LOCUS       XM_071832122             963 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841936), mRNA.
ACCESSION   XM_071832122
VERSION     XM_071832122.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..963
                     /gene="LOC139841936"
                     /note="uncharacterized LOC139841936; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841936"
     CDS             1..963
                     /gene="LOC139841936"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688223.1"
                     /db_xref="GeneID:139841936"
                     /translation="MDLYGASHPFLFLIVMEGLHICIKEKILEGHFCGATVSNPPISV
                     SHLFYAYDAIFVCNWHRNNLVAILQVLATFHEASGLTINLAKSYLYGIGANESDLESM
                     LDIAHCSKGTLPFTYLGLQMGVSMNRVNNWYGFIERFKKKLSRWQANLLSISSQATLV
                     KSVLGSMGIYYLSLYKCPKTVVNDVENIRASFFWGSTNDNRRMHWIRRDQELASKENG
                     GLSIGSIHAFNHSLLLKWVWRLYMNNDAMWVSVIKAIYGSDGGIHALDLWSKIQVWVD
                     LNIPIVSSWASWIDWYNDEPLTFDAKVKLFAIVGAIVCFLVRLA"
     misc_feature    <25..366
                     /gene="LOC139841936"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atggatttgt acggggcgtc acatcctttc ctatttttga ttgtgatgga agggttacat
       61 atttgcatca aagaaaaaat tctggaaggc catttctgtg gtgctacggt cagtaatcct
      121 ccaatttctg tttctcactt attttatgcc tatgacgcaa tttttgtttg taactggcat
      181 agaaataatt tagttgcaat ccttcaagtc cttgccacgt ttcatgaggc ttcgggatta
      241 accatcaact tggctaaatc atatttatac ggtattgggg cgaatgaaag tgatttagag
      301 tcgatgttgg atattgctca ttgttctaaa ggtacattac catttacgta ccttggtctt
      361 caaatgggtg tctcgatgaa tcgggttaat aattggtatg gtttcattga acggtttaaa
      421 aaaaagctat ccagatggca agcaaactta ttatcaatta gtagtcaggc aactttagta
      481 aaatcggttc ttggatcgat gggcatttat tatctttccc tatataaatg ccccaaaacg
      541 gttgttaatg atgttgagaa tattcgtgct tcattttttt ggggaagcac taacgataat
      601 agaaggatgc attggattag acgggatcaa gagctagctt cgaaggaaaa cggaggttta
      661 tctattggaa gtattcatgc tttcaatcat tcattacttc ttaaatgggt ttggcgtttg
      721 tatatgaata atgatgcaat gtgggtgtcg gttattaaag cgatctatgg aagtgatggt
      781 gggattcatg ctcttgattt atggtctaag attcaggttt gggttgacct aaacattcct
      841 attgtatcct cgtgggcttc ttggatcgat tggtacaatg atgagcctct cacttttgat
      901 gctaaagtca agcttttcgc gattgttggt gctatagtgt gctttttggt tcgcctcgct
      961 tga
//
LOCUS       XM_071832124            1626 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841937), mRNA.
ACCESSION   XM_071832124
VERSION     XM_071832124.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1626
                     /gene="LOC139841937"
                     /note="uncharacterized LOC139841937; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139841937"
     CDS             1..1626
                     /gene="LOC139841937"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688225.1"
                     /db_xref="GeneID:139841937"
                     /translation="MKKDLEKLVNINQSAFIPGRAIQDNILVTRELLKGYNRLNGPKR
                     CALKIDLQKTYDTVSWSFLKSILAKFGFHDKMVGWIMNCVSTTKFSVCINNEIKGYFH
                     GGRGLRQGDPISPYLFTLVMEVLNLILANSIKVNPLFKFHVGCKKMKLTHVCFADDLL
                     VFCHGDVNSIKVIKQALEEFSQVSGLLPDMHKSTVFFGSVNMGLQNEITQLLPFKVGK
                     LPVKYLGVPLLDKRLGVADCREIIDKIKCELSKGKAKVAWKIVCTPKNQGGLGLKHLR
                     EWNDVLLTKQLWKLIEQKDSLWFNWVNIVKLKGRTIWEIEGKQNDSWGWKQLLELRDR
                     VKDHVDVDDQGLVKWITNNGSKANPKHAFIVWLAFLDRLTTQEKLMNWYPNQCLKCEL
                     CGKCEDSSKHLFFDCDYSNKVWNELKKRLLFRGLPDNLQGIVNMLANFPFRSQIWDII
                     NRLTVAAGVYHVWQERNSRVFNRRRRKIEDLVMHIEDVIRMKLTTFSVKSTNAMIRAA
                     KNWDLEVIGGRLVVKAGSPNCDDEDERSFRFKI"
     misc_feature    1..684
                     /gene="LOC139841937"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(148..165,325..330,463..465,469..474,670..675)
                     /gene="LOC139841937"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(148..165,325..327,469..471)
                     /gene="LOC139841937"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    328..330
                     /gene="LOC139841937"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <1063..1239
                     /gene="LOC139841937"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaagaaag acttggaaaa actggttaac atcaatcaaa gtgcattcat acctggaaga
       61 gctatccaag ataacattct cgtcactcgg gagcttttaa agggatataa tagattgaat
      121 ggtccaaaaa ggtgtgccct caaaatcgat ctacaaaaaa catatgacac agtaagttgg
      181 agttttctga aatctatctt ggccaagttt ggttttcatg acaaaatggt tgggtggatt
      241 atgaactgtg tttctactac aaagttttca gtgtgtatca acaatgagat taaaggatac
      301 tttcatggag gtagaggttt aaggcaagga gaccccatat ctccttacct atttaccctt
      361 gttatggagg ttctcaattt aatattggca aacagtatca aagttaatcc tttattcaaa
      421 tttcatgtgg gctgcaaaaa aatgaaactt acacatgtat gctttgctga tgatttgctg
      481 gttttctgtc atggtgatgt caactcaatc aaagttatta agcaggcttt ggaggaattc
      541 agtcaagttt ctggactttt gcctgatatg cacaaaagca ctgttttctt tggtagtgtg
      601 aatatgggtc tgcaaaatga aattacccaa ttattgcctt ttaaagtagg taagctgcca
      661 gtaaagtacc ttggtgttcc tcttttagac aaaaggcttg gagttgctga ttgcagggaa
      721 attattgaca aaattaaatg tgagttatct aaaggaaaag caaaggtggc atggaaaata
      781 gtatgtactc ctaaaaatca aggaggtttg ggtttaaaac atctaagaga atggaatgat
      841 gtccttttaa ccaaacagct atggaaactg attgagcaga aagattcctt atggtttaat
      901 tgggtgaaca ttgtaaaact aaaaggaaga actatttggg agattgaagg caaacagaat
      961 gatagctggg gatggaagca attattggaa ttaagagata gagttaaaga tcatgtggat
     1021 gtggatgatc aaggtttggt taaatggatt actaataatg gcagtaaggc taatcctaag
     1081 catgcattca ttgtatggtt agcttttctt gatagactta ctacacagga gaaactgatg
     1141 aattggtatc caaatcagtg tttgaaatgt gagctttgtg gaaaatgtga agattcttcc
     1201 aagcacctat tctttgattg tgattattct aataaggtgt ggaatgagct aaaaaagaga
     1261 ctattattca ggggtcttcc tgataatttg caaggcattg tcaatatgct tgctaatttc
     1321 ccctttagaa gccaaatatg ggatatcatt aacagactta ctgtagctgc tggtgtatac
     1381 catgtatggc aggaaagaaa tagcagagta ttcaatagga ggagaaggaa gattgaggat
     1441 ctggtgatgc acattgaaga tgtaattcga atgaaattga ctaccttttc tgtaaaaagt
     1501 acgaatgcta tgataagagc tgccaagaat tgggacttag aggtgattgg gggtagactg
     1561 gtggttaaag ctggaagccc taattgtgat gatgaagatg agaggtcatt tcggttcaag
     1621 atttaa
//
LOCUS       XM_071832125            1050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841938), mRNA.
ACCESSION   XM_071832125
VERSION     XM_071832125.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1050
                     /gene="LOC139841938"
                     /note="uncharacterized LOC139841938; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841938"
     CDS             1..1050
                     /gene="LOC139841938"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688226.1"
                     /db_xref="GeneID:139841938"
                     /translation="MQNNKPFYNVDDADEFVVIDEDARIKLGEFNKKYPQHDPNVHWK
                     SMRPRKGEKFANVSEFKIVSLVMLSVMVINFILRKVIGLDGCFLKGIAIGQLLSALGK
                     DANNQVYPLAWAVVDGLIEAVRVILSNGEHRQCARHVYGNFAKRWGGLQFKQLFWAAA
                     KCTYEEKFVFIMQKIKDINEEAYHHFADKRPAFCSRAFYRSSFDCDAVENEISECWNS
                     MIKDARAKPIISMSEDIRIKVMSRLVDQRKVADKWAHDVCPTIRIKIQTNERLQRKWI
                     VWASGIQEYEIRTISNEEVFTVNLLERTCSCRGLQISGISCPHAIAAQYHVGHNIEDL
                     VSENLKKQKFIIAYS"
     misc_feature    238..426
                     /gene="LOC139841938"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    907..>969
                     /gene="LOC139841938"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgcaaaaca acaaaccatt ctacaatgta gatgatgcag atgaatttgt tgtgattgat
       61 gaggatgccc gaatcaagct tggggagttt aataaaaagt atccacagca tgatccaaat
      121 gttcactgga agtcaatgcg tccacgtaaa ggagaaaagt ttgctaatgt ttctgaattt
      181 aaaattgtat cattagttat gctgtcagta atggttataa actttatttt gagaaaggtg
      241 attgggttag atggatgctt cctaaagggt attgcaattg gtcaactatt gagtgcactt
      301 ggcaaggatg caaacaacca agtgtatcct ctagcttggg cagtggttga tggtcttata
      361 gaggcagtta gggttattct ttcaaatggt gagcatagac aatgtgcaag acatgtgtat
      421 ggaaactttg ccaaaaggtg gggtggtctg caatttaaac agctgttttg ggcagcagca
      481 aaatgcacat atgaggagaa atttgttttc attatgcaaa aaatcaaaga tatcaatgaa
      541 gaagcctatc accactttgc agataaaaga ccagcctttt gcagtagggc cttttacaga
      601 tcaagttttg attgtgatgc tgttgaaaat gaaatttctg aatgttggaa ctcaatgatc
      661 aaagatgcca gagctaagcc tattattagc atgtcagaag atataagaat caaagttatg
      721 tcaaggttag ttgatcaaag aaaagttgct gacaagtggg cacatgatgt ttgtccaaca
      781 attaggatca aaattcaaac taatgagagg cttcaaagga aatggattgt ttgggctagt
      841 ggtatacaag agtatgaaat tagaacaatt agcaatgaag aggtatttac tgtgaatctg
      901 ttagaaagaa cttgttcttg taggggtttg cagataagtg gtatttcatg tcctcatgca
      961 attgcagctc aatatcatgt tgggcataat attgaggatt tagtaagtga aaaccttaag
     1021 aaacaaaaat tcattattgc atatagctaa
//
LOCUS       XM_071832126             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841939), mRNA.
ACCESSION   XM_071832126
VERSION     XM_071832126.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139841939"
                     /note="uncharacterized LOC139841939; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841939"
     CDS             1..645
                     /gene="LOC139841939"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688227.1"
                     /db_xref="GeneID:139841939"
                     /translation="MEDQSTCLLDWSYFYHGKTTEELAESLLIKTMELEATRFKAQEE
                     LNKKDDQLTNLKHLLTTAINEKNEAQNRYQTLLNYHRTTTVPPPHSAVSSIEDEPITN
                     ANLSLSDCEESIVSSLVMETPIGVTPPSRLPELKLGFPVRILPEKGKLLEAVIKAGPL
                     LQNLLLAGPLPHWRHPPPPLDSYRIPPPPVVKRGFDEGSESSTETKYQRIASIS"
     misc_feature    52..627
                     /gene="LOC139841939"
                     /note="Protein of unknown function (DUF1635); Region:
                     DUF1635; pfam07795"
                     /db_xref="CDD:400238"
ORIGIN      
        1 atggaagatc aaagcacttg ccttcttgat tggtcatatt tctaccatgg aaagacaacg
       61 gaagaattag cagaatcact attgatcaag acaatggagc ttgaagcaac aagattcaaa
      121 gcacaagaag aattaaataa aaaagatgat caattaacta atcttaaaca ccttttaacc
      181 accgcaatta acgaaaagaa tgaagcccaa aaccgttacc aaactctcct caattaccac
      241 cgtacaacca ccgtaccacc gccgcactcc gccgtatcaa gcatagaaga tgaacccatt
      301 accaatgcca acttatcgct atctgattgt gaagaaagca ttgtttcatc gctggtgatg
      361 gaaaccccaa ttggagtaac accgccgtca cggttgccgg agctaaaatt gggttttccg
      421 gtgaggattt tgccggaaaa agggaagctt ttagaagcag tgataaaagc agggcctttg
      481 ttacagaact tacttttggc gggaccattg ccacattggc gtcacccacc gccgccgttg
      541 gatagttacc ggattcctcc gccgcccgtg gtgaaacgag ggtttgatga agggtctgag
      601 tcttccactg agaccaaata tcaaagaatt gctagtatta gttaa
//
LOCUS       XM_071832127             834 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger CCCH
            domain-containing protein 15-like (LOC139841941), mRNA.
ACCESSION   XM_071832127
VERSION     XM_071832127.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 4% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-16                JBITNF010000004.1  396108191-396108206
            17-222              JBITNF010000004.1  396109832-396110037
            223-223             "N"                1-1
            224-348             JBITNF010000004.1  396110038-396110162
            349-528             JBITNF010000004.1  396114304-396114483
            529-834             JBITNF010000004.1  396115377-396115682
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..834
                     /gene="LOC139841941"
                     /note="zinc finger CCCH domain-containing protein 15-like;
                     The sequence of the model RefSeq transcript was modified
                     relative to its source genomic sequence to represent the
                     inferred CDS: inserted 1 base in 1 codon; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841941"
     CDS             1..834
                     /gene="LOC139841941"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: zinc finger CCCH
                     domain-containing protein 15-like"
                     /protein_id="XP_071688228.1"
                     /db_xref="GeneID:139841941"
                     /translation="MVDTDYTFDAQLYSSIFPTTPPPRHFSVPPNATTAPLTLLPIVS
                     EYDRNYSQDFAPFQDLIERCNWCLTNLSLSXKEAEALRQENVNLQVRNSELSKQMSHL
                     QQQHHAAASSSHANKQGALEVENVDPIKKTDVERVKLPKSISVRSNGYLKTAQVAGGS
                     TVRAHVEDRVKKASEMQRVYVRGKKEEQPLELQLYNQGMTKTELCNKWQQTGACPYGD
                     HCQFAHGIQELRPVIRHPRYKTEVCRIVLAGDPCPYGHRCHFRHALTEEEKLMSCSIN
                     N"
     misc_feature    <601..786
                     /gene="LOC139841941"
                     /note="CCCH-type Zn-finger protein [General function
                     prediction only]; Region: CTH1; COG5063"
                     /db_xref="CDD:227395"
ORIGIN      
        1 atggtggata ctgactatac tttcgacgca caactttact catcaatctt tcctacaact
       61 ccacctccac gtcacttctc cgtaccacca aatgcaacaa ccgcaccatt aacgttacta
      121 ccgattgtat ctgaatacga ccgtaactat tcacaagatt tcgcgccatt tcaagaccta
      181 atcgagcgat gtaactggtg cctaactaac ctcagtttat ctngcaaaga agccgaagcg
      241 ctgcgtcaag agaatgtgaa tcttcaagtg aggaattctg aattaagcaa gcaaatgtct
      301 cacttgcaac agcaacatca tgcagcagct tcaagttctc atgctaataa acaaggggca
      361 cttgaagtgg agaatgtgga tccgataaag aaaactgatg tggagcgtgt taagttgcct
      421 aaaagtattt ctgttcgatc taatggatac ttgaaaactg ctcaagttgc tggtggaagt
      481 actgtacggg ctcatgttga ggatcgggtt aaaaaagctt ctgaaatgca aagggtttat
      541 gtacgtggaa agaaagagga gcaaccactg gaacttcaat tatacaatca gggtatgacc
      601 aagactgaac tctgcaacaa atggcagcaa actggtgcct gcccatatgg agatcactgt
      661 caatttgctc atggcattca agaacttcgt ccagtcattc gtcatccacg ctataaaaca
      721 gaagtctgtc gaatagtcct tgctggcgac ccgtgcccat atggccaccg ctgtcatttt
      781 cgtcatgctc taactgagga ggagaaactc atgagttgca gtatcaataa ctga
//
LOCUS       XM_071832129             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841943), mRNA.
ACCESSION   XM_071832129
VERSION     XM_071832129.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139841943"
                     /note="uncharacterized LOC139841943; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841943"
     CDS             1..591
                     /gene="LOC139841943"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688230.1"
                     /db_xref="GeneID:139841943"
                     /translation="MELEATRFKAQEELNKKDDQLTNLKHLLTTAINEKNEAQNRYQT
                     LLNYHRTTTVPPPHSGVSSIEDEPITNTNLSLSDCEESIVSSPVMETPIGVTPPLRLP
                     ELELGFPVRVLPEKGKLLEAVIKAGPLLQNLLLAGPLPHWRHPPPPLDSYRIPPPPVV
                     MPPVHYLFDKKRGFDEGSESSTETKYQRIASKKILY"
     misc_feature    1..564
                     /gene="LOC139841943"
                     /note="Protein of unknown function (DUF1635); Region:
                     DUF1635; pfam07795"
                     /db_xref="CDD:400238"
ORIGIN      
        1 atggagcttg aagcaacaag attcaaagca caagaagaat taaataaaaa agatgatcaa
       61 ttaactaatc ttaaacacct tttaaccacc gcaattaacg aaaagaatga agcccaaaac
      121 cgttaccaaa ctctcctcaa ttaccaccgt acaactaccg taccaccgcc gcactccggc
      181 gtatcaagca tagaagatga acccatcacc aataccaact tatcgctatc cgattgtgaa
      241 gaaagcattg tttcatcgcc ggtgatggaa accccaattg gagtaacacc gccgttaagg
      301 ttgccggagc tagaattggg ttttccggtg agggttttgc cggaaaaagg gaagctttta
      361 gaagcagtga taaaagcagg gcctttgtta cagaacttac ttttggcggg accattgcca
      421 cattggcgtc acccaccgcc gccgttggat agttaccgga ttcctccgcc gccggtggtg
      481 atgccaccgg ttcattattt gtttgataag aaaagagggt ttgatgaagg gtctgagtct
      541 tccactgaga ccaaatatca aagaattgct agcaagaaaa tcttatattg a
//
LOCUS       XM_071832130             879 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841944), mRNA.
ACCESSION   XM_071832130
VERSION     XM_071832130.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..879
                     /gene="LOC139841944"
                     /note="uncharacterized LOC139841944; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841944"
     CDS             1..879
                     /gene="LOC139841944"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688231.1"
                     /db_xref="GeneID:139841944"
                     /translation="MASYLLSYDSDSEDERIIALIQHLEDDDDEVESELVPRSRIYIP
                     RNREEARENIWKDYFSDTPVFPPYKFKRRFRMRIELFLRISQVISNFDSHDTPEHFRF
                     FRERFDAIGRPTFTILQKMTSALRQLAYGTAADMFDEYLKMSEQTSILCLDNFCKCII
                     TLYKERYMRSPNAYDVQRLYSKHEEKHYFKGMLGSIDCMHWEWKNCPVALKGQYTRGD
                     HKKPTIMLEAVASYDLWIWHAFFRMAGSNNDINVLNQSYVFDKLKKGTSSLAPFEVNG
                     NQYTKGYYLAGGIYPD"
     misc_feature    496..>873
                     /gene="LOC139841944"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcatcgt atttacttag ttacgattcc gattcggaag acgagcgtat tattgcacta
       61 attcaacatt tagaagatga tgatgacgaa gtcgaatccg agcttgttcc aagatcacga
      121 atttatattc caagaaatcg tgaagaagcc agagaaaaca tatggaagga ttatttcagt
      181 gacacacccg tgtttccgcc atataaattt aaaaggcgtt ttcgtatgcg gattgaacta
      241 tttctccgaa tatcgcaagt tatttctaat ttcgattctc atgatactcc cgagcatttt
      301 agatttttta gggaacgttt tgatgctatc ggtcggccga cttttacaat attgcaaaaa
      361 atgacttcag ctctacgcca attggcgtat ggaactgccg ccgatatgtt tgatgaatat
      421 ttaaaaatga gtgagcaaac ctcaatactt tgtttagata acttttgtaa atgtattatt
      481 acattataca aagaacgtta catgagatct cccaatgcat acgatgttca acgattatat
      541 agtaaacatg aagagaaaca ttattttaag ggtatgctcg ggagtattga ttgtatgcat
      601 tgggagtgga agaattgtcc cgttgctttg aagggacaat acactagggg tgatcacaag
      661 aaacctacca ttatgcttga agcagttgct tcgtatgact tgtggatttg gcatgcattt
      721 tttagaatgg cgggttccaa caatgatata aatgttttga atcaatcata tgtttttgat
      781 aaacttaaaa agggaacatc ttcactagca ccatttgagg taaacggtaa tcagtacaca
      841 aaaggctatt acctagctgg cggtatatat cctgactga
//
LOCUS       XM_071832131             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841945), mRNA.
ACCESSION   XM_071832131
VERSION     XM_071832131.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139841945"
                     /note="uncharacterized LOC139841945; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841945"
     CDS             1..636
                     /gene="LOC139841945"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688232.1"
                     /db_xref="GeneID:139841945"
                     /translation="MDANNGILPLAYDIGAGETTDHWTWFFGNLRDSLQSLGCCIHNL
                     TIISDRAPAIAAGISIVFTEVFHALCARHLLGNLKTRRIPDSTRTLTTVGLNRWSRHH
                     EDRVRYAYLTTNSAESMNALSVHARKLLITMLLEFFRASVQQWFWEHRNTAHGLTTPV
                     TSYAERKLCKRNRNSLTWTVKPISQVKFEVMDIKKGSKVNLQDKTCTCKQW"
     misc_feature    <4..231
                     /gene="LOC139841945"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atggatgcta acaatggaat ccttccatta gcctacgata ttggagcagg agagaccacc
       61 gatcattgga catggttttt tggtaatcta agagactctc tacagtcttt ggggtgttgt
      121 attcataatc ttaccattat atctgacagg gcacctgcaa tagctgctgg catatcaatt
      181 gtatttacag aagtatttca tgcactatgt gctagacatt tgttgggaaa ccttaaaaca
      241 cgacgtattc cagacagtac acgtacactc actactgttg gcctcaacag atggtctaga
      301 catcatgaag atcgtgttcg gtatgcttat ctgactacta atagtgcaga gtcaatgaac
      361 gcactgtcag ttcatgcgag gaaactcctg attacaatgc ttcttgaatt ctttagagct
      421 tcagttcaac aatggttttg ggaacaccga aacactgcac atggtttaac aacacctgtc
      481 acttcatatg cagagcgtaa gctgtgtaaa agaaatcgca attctcttac ttggactgtc
      541 aaaccgatat cacaagttaa gtttgaggta atggatataa aaaaaggcag taaagtcaat
      601 ctacaagata aaacttgcac atgtaaacaa tggtag
//
LOCUS       XM_071832132            1767 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841947), mRNA.
ACCESSION   XM_071832132
VERSION     XM_071832132.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1767
                     /gene="LOC139841947"
                     /note="uncharacterized LOC139841947; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841947"
     CDS             1..1767
                     /gene="LOC139841947"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688233.1"
                     /db_xref="GeneID:139841947"
                     /translation="MSNNKQKGKNVIVDSEKEKGNKSWRNKELNNVECKWVVHVSKRS
                     GSETWQVVTFKDKHICAWSRDVTHFTYDFLATKLVEQLPSNPRLPAKAVKVQAETQYG
                     MKVSKMKAYRALKKARTIVEGDYAEQYAHLRDYLVELKKANPGTTVKVGTKPSDEDAT
                     SMIFKRVYICLGPLKSGFQALGRDLLGLDGAFMKEPARGQLLTAVGVDSNNEVYPVAY
                     AIVKKETYNSWLWFLNNLGENLDLNERSNFTFISDRQKGLLPAIERLYPFAEHRYCLR
                     HIHENMKKNYSGVAYKEMLWKCAIATTMPHFEQEMQKLKGFSEGCYKYLADIQPHHWA
                     RSHFSVLNRWLVDARDKPIITALEYIREYLMKRIVTVNNMISKSDGPLTPGATKVFDG
                     IKKQAKKYTVMWNGDHLYQVSGPHNDQCVVDMNARVCACRKWEITAMPCKHAVAALYH
                     MGAFGARVGHLESWVHRVHWLETWRNTYNFKINPLNSMHLWRKSLVTSKLLPPLIVAT
                     AGRPKKNRRKGLDEQASMNSGGKLSRQGKTTRYGKCGELGHNQRSCTNSGGVGGNSGS
                     KSKKKQSGGTKKTKLNVGASSG"
     misc_feature    553..843
                     /gene="LOC139841947"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    1285..1356
                     /gene="LOC139841947"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgagtaata ataaacagaa aggcaagaat gtaattgttg attctgagaa agagaagggt
       61 aataaatctt ggagaaataa agaacttaac aatgtggagt gcaagtgggt agttcatgta
      121 tcaaagagaa gtggttcaga aacatggcaa gtggtaacat ttaaggataa acacatatgt
      181 gcttggtcta gagatgttac acatttcaca tatgactttc ttgcaacaaa gttagttgaa
      241 caacttccct caaatccaag attaccagca aaggcagtta aggtacaggc tgaaacacaa
      301 tatggaatga aagtgtcaaa gatgaaggca tacagagcat taaagaaggc aagaacaatt
      361 gtggaagggg attatgctga acaatatgct cacttaaggg attatttagt ggaacttaaa
      421 aaagctaatc caggtacaac tgtaaaggtt ggaacaaaac catctgatga agatgcaaca
      481 agtatgatct ttaaaagagt ttatatatgt ttaggaccat tgaaaagtgg ctttcaagct
      541 ttaggcaggg atttgcttgg tttagatggg gcttttatga aagagccagc tagaggtcaa
      601 ctactcactg ctgttggtgt tgactcaaac aatgaggtat atcctgtggc ttatgcaatt
      661 gttaagaaag aaacatacaa ctcttggtta tggttcttaa ataatttagg tgaaaatttg
      721 gatctaaatg aaagatcaaa ctttacattc ataagtgata gacaaaaggg tttattacca
      781 gcaattgaaa ggttgtaccc gtttgctgag catagatact gtttgaggca catacatgaa
      841 aacatgaaga aaaattatag tggtgttgcc tataaagaaa tgctatggaa atgtgcaata
      901 gcaacaacaa tgccacattt tgaacaagaa atgcaaaaat tgaagggttt tagtgaaggc
      961 tgttacaaat atttagctga tatacaacct catcattggg caagaagtca cttttcagtt
     1021 ctaaacaggt ggttagttga tgcaagagat aagcctatca taactgcttt agagtatatt
     1081 agggagtact tgatgaaaag gattgtgaca gtcaataata tgatatccaa atctgatggt
     1141 cctttaaccc ctggagcaac taaagtgttt gatggtatca agaagcaagc taaaaaatac
     1201 actgtgatgt ggaatggtga tcatttgtac caagttagtg gtccacacaa tgatcaatgt
     1261 gttgttgata tgaatgcaag agtgtgtgct tgtagaaagt gggaaatcac tgcaatgcca
     1321 tgtaaacatg cagtagctgc attgtaccat atgggtgcat ttggtgcacg tgttggtcac
     1381 ctagaaagtt gggttcatcg tgtacattgg ttagaaactt ggaggaacac ttacaatttc
     1441 aaaattaatc ctttgaatag tatgcatctg tggcgtaaat cattggtgac tagtaaacta
     1501 cttccacctt taattgtggc tacagctggt agaccaaaaa agaataggag aaagggtcta
     1561 gatgaacagg caagcatgaa ttcaggtggt aagttgtcca gacaaggtaa aactactcgt
     1621 tatggaaaat gtggtgaatt agggcataat caaagaagtt gcacaaatag tggtggtgtt
     1681 ggaggaaaca gtggatcaaa gagcaaaaag aaacaaagtg gtggaactaa gaagacaaag
     1741 ttgaatgttg gtgcaagcag tggctaa
//
LOCUS       XM_071832134             759 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841948), mRNA.
ACCESSION   XM_071832134
VERSION     XM_071832134.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..759
                     /gene="LOC139841948"
                     /note="uncharacterized LOC139841948; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841948"
     CDS             1..759
                     /gene="LOC139841948"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688235.1"
                     /db_xref="GeneID:139841948"
                     /translation="MDRWCQGSILRDLFTYIFYLDENKQCLVIDKWHNNEWNCNRRRP
                     VRGGIEVEQLDALNSLLAQVSCSNLDEKWCWTITSDQFFPASSIRVLLDRSMDVCRNT
                     YWNKVIPSKVLNFFLRLLLNRLPDKKNLQDRNISCSSYTCLDCGFTLEDANHVFFHCP
                     TATHVWSCITMWVCISLPRWKDLLDLMNWLASASPNPKKSLVLHCVCIATLWSIWRFR
                     NDIVFQTGLFKKSYILDNIFVSSFDWFYARYFFV"
ORIGIN      
        1 atggatagat ggtgccaagg ttcgattctt agagatctct tcacctatat attttatttg
       61 gatgagaata aacagtgttt ggttatcgac aagtggcata ataatgagtg gaattgcaat
      121 aggcgaagac ctgttcgtgg agggattgag gtcgaacaac ttgatgctct taattctctt
      181 cttgcgcagg tctcttgctc gaatctggac gaaaaatggt gctggacaat tacttctgat
      241 caattttttc ctgcttcatc cattagagtg ttgttagatc gctccatgga tgtatgtcgt
      301 aacacttact ggaacaaagt tattccatcc aaagtgctaa attttttttt gcggttgttg
      361 cttaatcgtc tccctgataa gaagaacctt caagatcgca atatttcttg ttcatcgtac
      421 acatgtttgg actgtggttt tactttggaa gacgctaatc acgtcttttt tcattgcccg
      481 actgcgactc atgtttggtc atgtattact atgtgggttt gcatttcttt accaagatgg
      541 aaggatttat tggatctcat gaattggtta gcctcagctt ctccaaaccc gaagaaatct
      601 cttgttcttc attgtgtttg catcgccaca ctttggtcta tttggagatt caggaatgat
      661 attgtcttcc agaccgggtt gtttaaaaag agctacattt tagataacat ttttgtttct
      721 tcttttgatt ggttttatgc tagatatttt tttgtttag
//
LOCUS       XM_071832135            2535 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841949), mRNA.
ACCESSION   XM_071832135
VERSION     XM_071832135.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2535
                     /gene="LOC139841949"
                     /note="uncharacterized LOC139841949; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841949"
     CDS             1..2535
                     /gene="LOC139841949"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688236.1"
                     /db_xref="GeneID:139841949"
                     /translation="MVNLDNQPITTRLQARIDVHDEKIDQLSNQIQDMNNNFNSNFSQ
                     INTTINTMQQVISDLPKYLDNLMKNIQNQNLDPKTPLAASGSGPRSITFAETFNPIKE
                     NNFDDTLFSLPKVKLPLFDGDDPRGWITKAELYFNVHKTPIDQKLLLTQMCMDGVALN
                     WFTNLLIKHPTTTWNEFRLKLLSRFSGTIYHNPHKALGSLFDEGDIDHYIEEFEVLSA
                     LIPDQSEEQAISMFLRGLQTNVKNWVRTLNPNSCDLAMEYARNVAFATGQSKKSISRA
                     KLNSGSGGYLNSRWRPTYNNDKLSPFSPTVTQISKPKSSPGQTFGQTKYSTYNTPKST
                     NPNFHNTRHLTKSDWEDRRRRGLCFKCGEKFTPQHKCAEGLLHILLLADDEELNNEGE
                     IRVLESHIVETPNGECQALEFCGLSTDSTSDLKTIKLIGELYGFPALILIDTGASHNF
                     ISTKLVAALGLDITTIGPLRIRLGDGHHILIQEQCKSVSLKFNSFNCEVDALIYDLGT
                     LDFILGIAWLGCLGDVLFNWQKQEVKFWNQGTQVKLHGIHSPLLDYTSLRNCLEGYLN
                     HLATVTDGNTTLNSTQKVQLNALLNEFAALFREPHGLPPLRAIEHTINMYAGHGPGQS
                     KCILKSSYLSKNKDSTWRLCIDYRALNQAIIPDKYPIPIVEELLDELHGAIYFSKIDL
                     KSGFYQVRVRDSDVEKTAFRTHDGHYEFLVMPFVLTNAPATFQVLMNEVQRPLLRKGV
                     LVFFDDILLYSSTWEQHMHLLATILQLLHNHALVINRKKSHFGIESVEYLDHILDSTW
                     VSMDPAKIQTAPVLALPDFSQPFEIECDASGRDIGVVLMQNRRPIS"
     misc_feature    454..714
                     /gene="LOC139841949"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1285..1554
                     /gene="LOC139841949"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1327..1329,1333..1335,1339..1341,1411..1419,
                     1534..1536)
                     /gene="LOC139841949"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1327..1335
                     /gene="LOC139841949"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1327..1329
                     /gene="LOC139841949"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1411..1422,1432..1443)
                     /gene="LOC139841949"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1903..2379
                     /gene="LOC139841949"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(2041..2058,2143..2148,2227..2229,2233..2238,
                     2368..2373)
                     /gene="LOC139841949"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(2041..2058,2143..2145,2233..2235)
                     /gene="LOC139841949"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    2146..2148
                     /gene="LOC139841949"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    2410..>2529
                     /gene="LOC139841949"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atggtaaatc tagataacca acctataaca accagacttc aagctagaat tgatgttcat
       61 gatgaaaaaa ttgatcaact ttctaatcag atccaagaca tgaacaacaa tttcaatagc
      121 aatttctctc aaataaacac tacaatcaac acaatgcaac aagtaatctc tgatcttcca
      181 aaataccttg ataacctgat gaaaaacatt caaaaccaga atctagatcc aaaaacacca
      241 ttggcagctt ctggttcagg acctagaagc ataacttttg ctgaaacatt taatcctatc
      301 aaggaaaata actttgatga tactctgttt tcactaccaa aggttaagct acccctgttt
      361 gatggcgatg atcctcgtgg gtggataaca aaagctgaac tatatttcaa tgtccataaa
      421 acacccatcg atcaaaaact gctactcacc caaatgtgta tggatggagt agccctaaat
      481 tggttcacca atcttctaat taaacacccc actacgacct ggaatgaatt tcgtcttaaa
      541 ctcctctctc gatttagtgg tacaatctat cacaacccac ataaagccct tggatcctta
      601 ttcgacgaag gtgacataga ccactacatc gaagaatttg aggtgttatc tgctttgatt
      661 ccggatcagt ctgaagaaca ggcgataagt atgtttctcc gtggtctgca aacaaatgtt
      721 aagaattggg ttcgtactct aaaccctaat tcctgtgatc tagctatgga gtatgctagg
      781 aatgtcgctt tcgctactgg acagagcaaa aaatcaattt ctagggcaaa attaaattct
      841 ggttcgggtg gttatctcaa ttctagatgg aggcccactt acaataatga taagttgagc
      901 ccattttccc ctactgttac acaaataagt aagcccaaga gttctcctgg tcaaactttt
      961 ggtcaaacaa aatattccac ttacaacacc cctaaatcca ctaaccctaa ttttcacaac
     1021 actcgtcact taactaaatc tgattgggaa gatagacgaa gaaggggact atgtttcaaa
     1081 tgtggcgaga aattcactcc acaacacaag tgtgctgaag gtctattgca tattcttctc
     1141 cttgctgacg atgaagaact caataatgaa ggtgagattc gtgtacttga gtctcacata
     1201 gtagaaaccc caaatggtga atgccaagct ctcgagttct gtggtttatc cactgactct
     1261 acttctgatt tgaaaacaat taaactaatt ggtgaactct atggttttcc cgcactaatt
     1321 cttatcgaca ctggtgcaag tcataatttc atatctacca agcttgtagc agctttgggt
     1381 ctcgatatca ccacaattgg tccattgcga attcgacttg gagatggaca ccatattcta
     1441 attcaagaac agtgtaaaag tgtttctctt aaattcaatt catttaattg cgaagtggat
     1501 gctctaattt atgaccttgg tacgctagat ttcattcttg gtattgcttg gttagggtgt
     1561 ttgggtgatg tcttgtttaa ctggcaaaaa caggaagtca aattctggaa ccaaggcacc
     1621 caggtgaagt tacatggcat ccactcacca cttcttgact acacttctct ccgaaattgc
     1681 ttggaaggat acctcaatca cctagccact gtaacagacg gtaacacgac attaaactct
     1741 acacaaaaag ttcaattaaa tgctttactt aatgaatttg ctgccctatt tcgagaacca
     1801 catggtttac ctccattacg tgcaatagag catacaatca atatgtacgc tggacatggt
     1861 cctggtcagt caaagtgcat tctcaagtcc agttatctta gtaaaaacaa ggattcaact
     1921 tggcgacttt gcatcgacta ccgggcttta aaccaagcca tcattcctga taaataccct
     1981 attcccattg tagaagaatt actggatgag cttcacggtg ccatttactt ctctaaaatt
     2041 gatttaaaat ccggatttta tcaagttcgg gttcgcgatt cggatgttga aaagacagct
     2101 ttccgcacac atgatggcca ttatgagttt ctagtcatgc ctttcgtatt gacaaatgct
     2161 ccggctactt ttcaggtcct aatgaacgag gtacaacgtc cacttcttcg taaaggcgta
     2221 cttgtgtttt ttgacgatat tctattatat agttccacat gggaacaaca tatgcatttg
     2281 ttagccacta ttttgcagct tctccacaac cacgcgcttg ttataaacag aaaaaagagt
     2341 cactttggca tcgaatcagt tgagtatctg gatcacattt tggacagcac atgggtatct
     2401 atggaccctg ccaaaatcca aacagctcct gttttggccc ttcctgattt ctcacaaccg
     2461 tttgaaatcg aatgtgatgc ttcagggcgt gatatcgggg tagtccttat gcaaaatcga
     2521 cgccctattt cttaa
//
LOCUS       XM_071832136             486 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841950), mRNA.
ACCESSION   XM_071832136
VERSION     XM_071832136.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..486
                     /gene="LOC139841950"
                     /note="uncharacterized LOC139841950; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841950"
     CDS             1..486
                     /gene="LOC139841950"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688237.1"
                     /db_xref="GeneID:139841950"
                     /translation="MSQEYFHDNKYSRAIHLQHQFANTHIENFPDASTYCQELKVLSD
                     QLAIVGQVFEEDRIVLQMVTGLNDSYDSLQSLITYREKVPTFYEARSMLILEESRKNK
                     QVSSSSTALLCTNSNLTNPLQRKSSPSTQFTPYSHNPQTRGCSRGNYRGNNRGRGRNS
                     S"
     misc_feature    <46..309
                     /gene="LOC139841950"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtctcaag aatattttca tgacaataaa tattcgcgag ccattcatct tcaacatcaa
       61 ttcgctaata ctcatattga aaacttcccc gatgcatcaa catattgtca ggaattaaaa
      121 gttttgtccg atcaattagc catcgttggt caagtatttg aagaggatcg aattgttctg
      181 caaatggtca ctggacttaa tgactcttat gatagtcttc aatccctcat aacatatagg
      241 gaaaaggtac ctacatttta tgaagcaaga tctatgttga tactagaaga atctcgcaaa
      301 aacaaacaag tttcttcctc gtcgactgcg ttactgtgca ccaactctaa ccttacgaat
      361 cctttacaaa gaaaatcatc gccttcaact caatttacgc cttattcaca taatcctcaa
      421 acccgcggat gtagtcgtgg gaattatcga ggcaacaatc gaggtcgtgg tcgcaattcc
      481 tcttag
//
LOCUS       XM_071832137             714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841951), mRNA.
ACCESSION   XM_071832137
VERSION     XM_071832137.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139841951"
                     /note="uncharacterized LOC139841951; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841951"
     CDS             1..714
                     /gene="LOC139841951"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688238.1"
                     /db_xref="GeneID:139841951"
                     /translation="MSPNATTPVHQLSLRSVLKKEKLNDTNFLDWYRNLRIILKVEKK
                     SYILDGPVHEEPPANATKSIQDAWTKHVDDSKEVPCLMLATMIPDLQKDLEHHDAFEM
                     LKQLKEMFQQQARQQRFETVRALHACKMTEGTSVSSYVLKIKSYIDQLERLGSSIGPE
                     LEIDLILNSLPKSYDQFVLNYNMNNLEKSISELHLILKTAEKNIPSKTSEVLMIWEGK
                     IKKPQAKNKGKGKPKSQGN"
     misc_feature    <367..579
                     /gene="LOC139841951"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcaccca atgcaactac acccgttcac cagctttctc taagatctgt cttaaagaag
       61 gaaaaactca atgatacgaa cttcttagac tggtatcgta atttgagaat tattctcaaa
      121 gtcgaaaaga agtcgtatat acttgatgga cccgttcacg aggaaccccc tgctaatgcc
      181 actaagagca tccaagatgc ttggactaag catgtagatg actccaaaga ggtaccatgc
      241 ctcatgttag ccaccatgat tccagacttg caaaaggacc tggaacatca tgatgccttt
      301 gagatgctta agcagctaaa ggaaatgttc cagcaacaag ctaggcaaca acgctttgaa
      361 actgtcagag cgttacacgc atgcaagatg acagagggga catctgtaag ctcttatgtt
      421 ctaaaaataa agagctacat agatcaactt gagaggcttg gatcttccat tggtcctgag
      481 ttggaaatag acttgatcct caactcacta ccaaagtcat atgaccagtt cgtcttgaac
      541 tacaatatga acaatttgga gaaatctatc tcggagttgc atttaatact taagactgcc
      601 gagaagaata ttccatccaa aacctctgaa gtcctcatga tttgggaagg aaaaatcaag
      661 aagccccaag ccaaaaacaa aggtaaaggc aaacctaaga gtcaaggcaa ctaa
//
LOCUS       XM_071832138            2277 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like
            serine-protease S (LOC139841953), mRNA.
ACCESSION   XM_071832138
VERSION     XM_071832138.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 3% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2277
                     /gene="LOC139841953"
                     /note="subtilisin-like serine-protease S; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139841953"
     CDS             1..2277
                     /gene="LOC139841953"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:622..624,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: subtilisin-like
                     serine-protease S"
                     /protein_id="XP_071688239.1"
                     /db_xref="GeneID:139841953"
                     /translation="MKIAALFVVTLFVTLRICHGLTNKKHYIVYMGPHSHPSSESVIS
                     ANHEVLTLVLESNNEAKEATVHHYTKSFRGFSAMLTPDQALRLSENEGVISVFESRMN
                     RLHTTNSWRFLGVESIPQFNNPPPDLKSDVIVGVLDTGVWPESQSYNDYGLGPVPAKF
                     KGECISGQNFTRSNCNRKLIGARYYSKGYEAVNGPLENANRTFFRSAXDSEGHGTHTS
                     STIAGSKVSNVSVLGLGSGTARGGVPSARLSIYKICWFDDCEDADIFAAIDDAIEDGV
                     DVISMSLGPNPPQPIYYKDAISIGSFHAFQKGVVVCASAGNSFFPRTAANVAPWILTV
                     GASTINREFPSYVVLGNSKQLKGFGVNTMPDQGKQYGLISGSVAAASGIPSTNASFCK
                     NNTLDSNMIKGKIVVCKLEILTDSRIEKAIAIKEGGGAGMILIDLVSKYVFFQSVIPS
                     VLIGPAESQELQSYMNNEEDPTARIYLTVTHVGTKPAPEMAIFSSKGPNIITPNIIKP
                     DITAPGVNILAAWSPISTANTAGRSINYNIISGTSMSCPHVAAVAVLLKSVHPYWSPA
                     AIKSAIMTTATNTDNTQNLIKNDDSTYATPFEYGSGHINPAAALDPGLIYDSDSNDMI
                     NFLCSYGASFTQLKNLTATPIYCNNSSSPSYNFNYPSIGVDSMTGNLSVYRTVTYVGE
                     GPTSYYSKLEVIVGVKVSVYPDVLRFSKSGDKMTYRIDFVPYKSSNGSFEFGSLTWVN
                     NIHRVRGPIAVNVVSVEI"
     misc_feature    79..315
                     /gene="LOC139841953"
                     /note="Peptidase inhibitor I9; Region: Inhibitor_I9;
                     pfam05922"
                     /db_xref="CDD:428674"
     misc_feature    310..1731
                     /gene="LOC139841953"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; Region: Peptidases_S8_3; cd04852"
                     /db_xref="CDD:173795"
     misc_feature    order(412..414,637..639,790..792,847..849,949..951,
                     1627..1629)
                     /gene="LOC139841953"
                     /note="active site"
                     /db_xref="CDD:173795"
     misc_feature    order(412..414,637..639,1627..1629)
                     /gene="LOC139841953"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     misc_feature    1036..1425
                     /gene="LOC139841953"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     Region: PA_subtilisin_like; cd02120"
                     /db_xref="CDD:239035"
     misc_feature    1966..2253
                     /gene="LOC139841953"
                     /note="Fibronectin type-III domain; Region: fn3_6;
                     pfam17766"
                     /db_xref="CDD:465493"
ORIGIN      
        1 atgaaaatag cagcactttt cgttgttact ttgttcgtta ccctgagaat atgtcatgga
       61 cttaccaata aaaagcatta catagtctac atgggacccc actcgcaccc aagctcagag
      121 tctgtcattt cggctaacca tgaggttctc actttggtcc ttgaaagtaa taacgaagca
      181 aaagaagcaa cagttcatca ctatactaaa agctttagag gcttctctgc aatgcttaca
      241 cctgatcaag ctctaagact ttcagaaaat gaaggtgtca tttcagtgtt tgagagcagg
      301 atgaatcgac tgcacacgac taattcatgg agatttctag gagtggaatc tataccacaa
      361 tttaataatc ctcctccaga tttaaaatct gatgttattg ttggtgtcct tgataccggt
      421 gtttggcccg agtcgcaaag ctataatgac tatggattag gacctgtgcc agctaagttt
      481 aagggagagt gcatttcagg acaaaatttc acacggtcta actgcaacag gaaacttata
      541 ggagctagat actactcgaa aggatatgaa gccgtaaatg gacctcttga gaatgccaac
      601 cgtacattct ttcgatcagc atgagacagt gagggccatg ggacgcacac gtcgtctaca
      661 attgctggat cgaaagtctc caacgtcagc gtactggggc ttggttcagg aaccgcaaga
      721 ggaggtgtac caagtgctag actttcaatc tataaaattt gctggttcga cgactgtgaa
      781 gatgccgata tttttgcagc aatcgatgat gctattgaag acggtgtcga tgttatttcc
      841 atgtctcttg gcccaaaccc tccccagcca atttattata aagacgcgat ttcgattgga
      901 tcatttcatg catttcaaaa aggcgttgtg gtatgtgcgt ctgcgggaaa tagctttttc
      961 ccacgtacgg cggctaatgt tgccccatgg atcttgactg ttggtgctag cacgattaac
     1021 cgtgagtttc catcatacgt agttcttgga aattcgaaac aattgaaggg ttttggcgtt
     1081 aatacgatgc ccgatcaagg aaaacaatac gggttgatat cgggcagtgt tgcagcagct
     1141 tccggaatcc catctacaaa tgcaagcttt tgcaagaaca atacgttgga ttcgaacatg
     1201 atcaagggga agatcgtagt gtgtaaactc gagatcttga ccgacagcag aatagagaaa
     1261 gcgattgcaa taaaagaagg tggtggtgct ggaatgatcc tcattgatct tgtttcgaaa
     1321 tacgttttct tccaatcagt tattccaagt gttttaatcg gaccagcaga atctcaagaa
     1381 cttcaatcgt acatgaacaa cgaagaggat ccaacggcta gaatttactt gacagtaaca
     1441 cacgttggga cgaaaccagc gccagaaatg gcgatcttct cttcaaaggg accgaacatt
     1501 ataactccca atataataaa acctgatata acggcaccag gagtgaatat tttagcagca
     1561 tggtcaccta tctcgacggc aaatacagct ggcaggagca ttaactacaa cataatctcg
     1621 ggcacttcga tgtcgtgtcc gcacgtagca gcagttgcag tgctgttaaa atctgttcac
     1681 ccgtactgga gccccgccgc cattaaatct gcaataatga caacagctac caacaccgat
     1741 aacactcaaa acttgatcaa aaacgacgat tcaacatatg caactccatt cgaatacgga
     1801 tcaggacaca taaatccagc tgcagcttta gatccgggac tcatttacga ttctgactcc
     1861 aacgatatga tcaacttcct ttgcagctat ggcgcaagtt tcacacaact caagaaccta
     1921 accgccacac caatttactg caacaattct tcatcacctt cttacaactt caactatccg
     1981 tctattggtg tcgatagtat gactggtaac ttatctgttt accgcaccgt tacttacgtt
     2041 ggtgaaggcc ccacatctta ttactcaaaa ctagaagtga ttgtgggagt gaaagtttca
     2101 gtttaccctg atgtattgag gttttcgaaa tcaggggata agatgactta caggatcgat
     2161 ttcgtacctt ataagagcag taatgggagc ttcgagtttg gatcgttgac atgggtgaac
     2221 aacattcaca gagttagggg tccgattgct gttaatgtag tttcggttga gatataa
//
LOCUS       XM_071832140             399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein eS6-like (LOC139841954), partial mRNA.
ACCESSION   XM_071832140
VERSION     XM_071832140.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..399
                     /gene="LOC139841954"
                     /note="small ribosomal subunit protein eS6-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 Proteins"
                     /db_xref="GeneID:139841954"
     CDS             <1..399
                     /gene="LOC139841954"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS6-like"
                     /protein_id="XP_071688241.1"
                     /db_xref="GeneID:139841954"
                     /translation="FGENDLPGLTDVTKPRMRGPKRASKIRKLFNLSKEDDVRKYVNT
                     YRCTFTNKAGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKLEAAEYQKLLAS
                     RLKEQREKRSESLAKKRSRLSTAFKPSIAG"
     misc_feature    <4..324
                     /gene="LOC139841954"
                     /note="Ribosomal protein S6e; Region: Ribosomal_S6e;
                     cl00931"
                     /db_xref="CDD:469996"
ORIGIN      
        1 tttggtgaaa atgatttgcc tggtcttacc gacgttacaa agccaaggat gagaggtcct
       61 aaaagagctt cgaagattcg taagctgttt aacctctcca aagaagatga tgtcagaaag
      121 tacgtcaaca cttaccgatg cacgttcaca aacaaagctg gaaaggaagt gagtaaggct
      181 cctaagatac aaaggttggt gacacctttg actttgcaaa ggaagagggc tagaattgcg
      241 gacaagaaga agaggattgc aaaggctaag ttagaggctg ctgaatacca gaagcttctt
      301 gcgagtcggt tgaaggagca acgagaaaag cgaagtgaga gtttggctaa gaagaggtct
      361 agattgtcaa ctgcttttaa gccatctatt gctggttag
//
LOCUS       XM_071832141            1815 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841955), mRNA.
ACCESSION   XM_071832141
VERSION     XM_071832141.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1815
                     /gene="LOC139841955"
                     /note="uncharacterized LOC139841955; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841955"
     CDS             1..1815
                     /gene="LOC139841955"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688242.1"
                     /db_xref="GeneID:139841955"
                     /translation="MIAKFCAENTDIRTKKVTEITTNADKFIQHISDYPIVTPPIVPA
                     TLGIYSGLTDPLNFIQRFEGVVSTYNWDEPVACRVFPMVLQGSARDWFNSLQGRNIIG
                     FIDLRDKFLLQFQNLLPQKKTYIECHDIKQGNKETLNALLTRYIYECQKIPSLNEDQK
                     ISGFLHAINPQRHPTLVRRLRRDVSPTFAKVQQETYDYIRGEEDSTITPACGWGKDKS
                     WQDDNDSFRDGNNDNFRGSGYPRRHGGGSYTRNDRHQGQNDNHGYNRRDRYTSRKWNN
                     ESFNTIQMLTKMPKEILLQERVARSFPDPQSLAENSRCDKSKFCNFHDDYGHDTNRCR
                     DLAELIAEVFEQDKLDHLITQGAASTTNAIILPTESNAPQVPNSADRKAPPVKNLGVK
                     MVSKKENLREIQVTNVVEVQGEISVFQVSEQFTNWQCPSITFLPISLSADHDKPVVVS
                     CRITNTGIVILKVHVDTGSSVDVMYEQCFNKLPEHIKALLKPTAASLAGFSGESTWPI
                     GQLELQVELVDDHDESLKRQALLSLYVMRNQSRFNMILGRTALSMFGAIPSTLHGMVK
                     FSTYKGIGTLTSAVIEPLCAMITARKSVGIERHAVLAK"
     misc_feature    232..510
                     /gene="LOC139841955"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1345..1644
                     /gene="LOC139841955"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1396..1398,1402..1404,1408..1410,1489..1497,
                     1633..1635)
                     /gene="LOC139841955"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1396..1404
                     /gene="LOC139841955"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1396..1398
                     /gene="LOC139841955"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1489..1500,1510..1521)
                     /gene="LOC139841955"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgatagcta aattttgtgc ggaaaatact gatatccgca caaaaaaggt gactgagatt
       61 actactaatg cagacaagtt tatccagcat atctctgact acccgattgt tacgccgccc
      121 attgtgccgg caacgctggg aatttactcg ggtttaactg accctttgaa ttttatacaa
      181 cgttttgaag gagttgtaag cacctataat tgggatgaac cggtagcatg ccgggtattt
      241 cctatggttc tgcagggatc agcaagggac tggttcaata gtttgcaagg ccgcaatatt
      301 attggcttta tcgatcttcg cgataaattt ttattgcagt ttcaaaacct tttacctcag
      361 aaaaagacgt atatcgaatg ccatgacatc aaacagggta acaaggaaac tttaaacgca
      421 ttacttacgc gatacatcta tgaatgtcaa aagataccaa gtttgaatga agatcaaaaa
      481 atctctggat ttttgcatgc tattaatccg cagcgacatc caacgcttgt gcgacgtttg
      541 agaagagatg tttcgccaac ttttgctaaa gtacaacaag aaacgtatga ttacatcaga
      601 ggtgaagaag atagcactat aacccctgca tgtggatggg gtaaagataa aagttggcag
      661 gacgataatg attctttccg tgatggaaat aatgataatt ttcgcggttc gggatatcca
      721 aggcgacatg gcggtggtag ttacacgcgc aatgacagac atcaaggtca aaatgataat
      781 catggatata accgtcgcga tcgctatact tcgcgaaaat ggaataatga atctttcaac
      841 actatccaaa tgttaacaaa aatgcctaaa gaaattcttt tgcaggaaag ggttgcgaga
      901 tcttttcctg atcctcaatc tttagcagag aacagcaggt gtgataaatc taagttttgc
      961 aattttcatg atgactatgg tcatgatact aaccgctgta gagatttggc agaattaatt
     1021 gctgaggtat ttgagcaaga taaattggat catttaataa ctcaaggtgc tgcaagcact
     1081 acaaacgcga ttatcctacc cacagagtct aatgctccac aagtgccaaa ttctgctgat
     1141 cgaaaagctc ccccagtgaa gaacctaggg gttaaaatgg tgagtaagaa agagaatctg
     1201 cgtgaaattc aggttactaa tgtagtggag gttcaaggcg aaatatcagt gttccaagtg
     1261 tctgaacaat tcacgaattg gcaatgcccc tctattactt tcctcccaat aagtttgagc
     1321 gcggatcatg ataagccagt ggtggtttca tgccgcatta cgaatactgg cattgtaatt
     1381 ctgaaggtac atgttgacac tggtagcagc gtggacgtaa tgtatgagca atgtttcaac
     1441 aaattgcctg aacatattaa agctttgcta aaacctactg cggcttcatt agctggtttt
     1501 tcaggagaat caacttggcc tattggtcag ttggaattgc aagtcgaatt agtagatgat
     1561 cacgatgaat cgctaaagcg ccaagcattg ttaagccttt atgtaatgcg aaatcagtca
     1621 aggtttaaca tgattcttgg gcgcactgct ttgagcatgt ttggcgcaat accatccacg
     1681 ttgcatggaa tggtgaagtt ttctacttac aaaggcattg gtacgctgac ttcggcggta
     1741 attgaaccac tttgtgcaat gattactgca cgcaaaagtg ttggcattga aagacatgcg
     1801 gtgctcgcta aataa
//
LOCUS       XM_071832142             768 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841956), mRNA.
ACCESSION   XM_071832142
VERSION     XM_071832142.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 33% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..768
                     /gene="LOC139841956"
                     /note="uncharacterized LOC139841956; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139841956"
     CDS             1..768
                     /gene="LOC139841956"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688243.1"
                     /db_xref="GeneID:139841956"
                     /translation="MEREIDQGVMDSAEVWAFIGDFRYPTIDNDDGNLSRNHNESQAA
                     LLSVISTTGDQDPRSRQVGVFPPNIARPLNGVKLLGAPATSDLGFSSELVMQRVTKSI
                     ALMDKVAKLDDPQCELLLLRACTGVSKLYFTLRTCPPSIFKAAQRAFDEALRSSLERI
                     VTASGPGFGDWQWRLATLPFAFGGLGVYSAGDVRHYAFLASRLQSAGLQTKLLRHTGN
                     PSEVAAPILMKKLADVYFTKIFIEFNVYLDSSKSSLY"
ORIGIN      
        1 atggaaagag agattgatca aggtgtaatg gattcggcag aagtttgggc ttttataggc
       61 gatttcagat atcccaccat cgataatgat gacgggaatc tgagtcgtaa tcataacgaa
      121 tctcaggcgg cgctgctgtc ggtgatatcc accacgggag atcaggaccc tcgcagcagg
      181 caagtaggtg tctttcctcc taatattgct cggcctttaa atggtgttaa gttgctaggg
      241 gcccccgcaa cttccgatct tggttttagt agtgaactgg tgatgcaaag ggtgaccaag
      301 tccattgcgc ttatggataa ggttgctaag cttgatgatc ctcagtgtga gttgttgttg
      361 cttagggcat gtacgggagt ttctaaactc tactttacct tgcgtacttg tcctcctagt
      421 atatttaagg cggctcaacg cgctttcgat gaagcccttc gatcttcttt ggagcgtatt
      481 gttactgctt cagggcctgg gtttggtgat tggcagtggc ggcttgccac cttgccattt
      541 gcatttggag ggcttggtgt ttattctgcg ggagatgttc gtcattatgc ttttctggct
      601 tctcgattac agtctgctgg gttgcagacc aagctcttac gtcatacggg taatccgagt
      661 gaggtcgctg ccccaatact catgaagaaa ttggcagatg tttatttcac aaagatattt
      721 attgaattca atgtttatct tgactctagt aaaagttcat tgtattag
//
LOCUS       XM_071832143             438 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841958), mRNA.
ACCESSION   XM_071832143
VERSION     XM_071832143.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..438
                     /gene="LOC139841958"
                     /note="uncharacterized LOC139841958; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841958"
     CDS             1..438
                     /gene="LOC139841958"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688244.1"
                     /db_xref="GeneID:139841958"
                     /translation="MSGELEVINERTELKLVQGETWDLFTDGASHAEGAGAGLLLASP
                     SCEEHTYALRFNFEVTNNEAEYEALLAGLNITHKMNVTKLRAFTDSQLVANQFSDAFD
                     AHGPSMQKYLKLLQESAMRFEHFELAQVPRNQNKKADVLSWLL"
     misc_feature    64..432
                     /gene="LOC139841958"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(79..90,178..186,193..195,265..267,385..387,427..429)
                     /gene="LOC139841958"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgtctggtg agctagaggt aattaatgag cgaacagagt taaagctagt gcaaggcgag
       61 acatgggatt tattcaccga tggagcctca catgcagagg gtgctggtgc gggtctattg
      121 ttagcaagcc caagctgtga agagcacaca tacgcgttac gttttaattt tgaggtaaca
      181 aataatgaag ctgaatatga agcattgctt gcgggtttaa atatcacgca taaaatgaat
      241 gtcaccaagt tgcgcgcttt tacggattcg cagctagtgg caaatcagtt tagcgacgct
      301 tttgacgcac atggcccctc aatgcaaaaa tatttgaagt tgttgcaaga atcagctatg
      361 cggtttgagc attttgaact tgcacaagta ccaaggaatc aaaataagaa agcggatgtg
      421 ttaagttggc tgctttga
//
LOCUS       XM_071832144             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841959), mRNA.
ACCESSION   XM_071832144
VERSION     XM_071832144.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139841959"
                     /note="uncharacterized LOC139841959; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841959"
     CDS             1..627
                     /gene="LOC139841959"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688245.1"
                     /db_xref="GeneID:139841959"
                     /translation="MSRHDMIPVNSPWSFNKWAIDIVGPFPAGPDNVKFLIVAIDYFT
                     KWVRTKAVRTITGVQVRNIVWEYIVFQKFTSMAHPQANGLCEVTNHDIVSGIKKRLYE
                     KRTVIPAEILVPTHRVANFDEEANDEALCENLNLIEERRLMAAIREANNKQQIANIAE
                     KLGKLGPNWEGPYKVVAINAAGSYKHANIEGRNLPNVWHAALLKRYYA"
ORIGIN      
        1 atgtcaaggc atgatatgat ccctgttaat tcgccatggt catttaacaa gtgggctatt
       61 gatattgtag gaccatttcc cgcaggtcct gacaatgtca aattcctaat tgtggcaatt
      121 gactatttta caaaatgggt taggactaag gcggtgcgca ctatcactgg agtacaagtg
      181 cgtaatattg tttgggaata tattgtcttt caaaagttta cgtcaatggc acatccacag
      241 gctaatggct tgtgtgaagt aactaaccat gacattgtaa gcggtattaa aaaacggttg
      301 tatgaaaagc gcactgttat acccgctgaa attcttgtgc caacgcatag agttgctaac
      361 tttgatgaag aagcaaatga cgaagcttta tgcgaaaact tgaatttaat agaagagcga
      421 agattaatgg ctgctatcag ggaggcaaat aacaaacagc aaattgccaa tatagcagaa
      481 aaacttggta aattgggacc taactgggag ggtccttata aagttgttgc cattaacgcg
      541 gctggatcat ataaacatgc aaacatagaa gggcgaaatc tccctaatgt gtggcatgct
      601 gctttgttga agcgatatta tgcataa
//
LOCUS       XM_071832145             507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841961), mRNA.
ACCESSION   XM_071832145
VERSION     XM_071832145.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..507
                     /gene="LOC139841961"
                     /note="uncharacterized LOC139841961; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841961"
     CDS             1..507
                     /gene="LOC139841961"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688246.1"
                     /db_xref="GeneID:139841961"
                     /translation="MVHAWHSGQRRKAEQLEEWEAEAIIFPSMQTINPSHAPIIIKGW
                     ITDCGYNVQRLNVDTGSNVDVMYDHCFWKLPESIMSKMRAPTTVLSGFSDESPWPLGC
                     IELELELVDDNDSTRTPAVPIEFCVVRSYSCYNALLGRVTLQKFCAVPSTVHGMIKFP
                     TRQGIATI"
     misc_feature    169..432
                     /gene="LOC139841961"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(172..174,178..180,184..186,265..273,409..411)
                     /gene="LOC139841961"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    172..180
                     /gene="LOC139841961"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    172..174
                     /gene="LOC139841961"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(265..276,286..297)
                     /gene="LOC139841961"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atggtgcatg cctggcactc tggtcagaga cgtaaagccg aacaattgga agaatgggaa
       61 gcggaagcta ttatcttccc ttcaatgcaa acaattaatc cttcgcatgc tcctataatc
      121 attaaaggtt ggatcaccga ttgtggatac aatgtgcaac gattaaacgt cgacacaggc
      181 agtaatgtcg atgtaatgta tgatcactgc ttttggaaac ttccggaatc aatcatgtcc
      241 aagatgcggg cacccaccac tgttttgtcg gggttttccg acgaatcacc atggcctttg
      301 gggtgcatcg agcttgaact agagttggtt gacgacaatg actcaacccg cacaccagct
      361 gtccccattg aattctgtgt ggtacgctct tattcgtgtt acaacgcact cctagggcga
      421 gtgactttgc agaagttttg cgcagtgccc tcaactgttc acggcatgat caagtttcct
      481 actaggcagg gtattgccac catctag
//
LOCUS       XM_071832146             648 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841962), mRNA.
ACCESSION   XM_071832146
VERSION     XM_071832146.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..648
                     /gene="LOC139841962"
                     /note="uncharacterized LOC139841962; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841962"
     CDS             1..648
                     /gene="LOC139841962"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688247.1"
                     /db_xref="GeneID:139841962"
                     /translation="MALSLKASLLGAGVKSWYQEPFTSVAHPHANGQCKVTSRDIVSG
                     IKARLGLYGNEWVDELPSVLWAHRTTHKNITGETPFSLDYGTEAVIPVELVVPTKRIR
                     SFNESSNDEGLHANLDILEERREIAAIREAVNKQKISKYYDKHVKPMSFKIGDYVWRN
                     NEASRVENTGKLGPNWEGPYEVIGISATRSYILAGLNGERIPRTWHATNLKRCYI"
ORIGIN      
        1 atggcactca gtttgaaggc gagcctttta ggagctggtg tcaagagctg gtatcaagag
       61 ccttttactt cggtcgctca cccacatgcc aatggccaat gtaaagtaac aagccgagat
      121 atcgtaagcg ggataaaagc gcgtctgggc ttgtatggga atgagtgggt tgatgagctc
      181 ccaagtgttt tgtgggcaca tcgcactact cataaaaaca tcacaggtga aacaccgttt
      241 agcttggatt atgggacaga agccgtaatc cccgtcgaat tagtggttcc aacgaagcgc
      301 atacgaagct tcaatgagtc aagtaatgat gaaggcttgc acgctaacct agatattcta
      361 gaagagcgca gagaaatagc tgccatacgc gaagccgtta acaaacaaaa gatctctaag
      421 tactatgata agcatgttaa gcctatgtcg tttaaaattg gagattatgt gtggcgcaac
      481 aatgaggcaa gtcgagtaga aaatactgga aagctggggc ccaactggga aggtccttac
      541 gaagttattg gcataagtgc aacgaggtcc tatatcctgg caggattgaa tggagaacga
      601 atacctcgta cttggcatgc aaccaatttg aaaagatgtt acatataa
//
LOCUS       XM_071832147            2442 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841963), mRNA.
ACCESSION   XM_071832147
VERSION     XM_071832147.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2442
                     /gene="LOC139841963"
                     /note="uncharacterized LOC139841963; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841963"
     CDS             1..2442
                     /gene="LOC139841963"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688248.1"
                     /db_xref="GeneID:139841963"
                     /translation="MEDNVADKYHDRLQQLFVDAEKPLYTGCMNFTKLSAVIQLVNLK
                     SNNGWSDTSFTSLLELLNKMLPEGNELSVSTYQAKKLMYKRGKLTDNADSDVSENGPP
                     AKLLWYLPIIPRLKRLFANEKDAKLLRWHAEDRKNDGKMRNVADSLQWKNFDKDFEEF
                     RDEIRNIRFGLSSDGINPFGDLSSRHSTWPVLLCIYNLPPWLCMKRKYIMMSLLIQGP
                     KQPGNDIDVYLQPLVDEMMELWSTGIYVYDAYKKEYFQLWAMLFCTINNFPAYGNLSG
                     YSTKGKKACPICEENTHSMRLTNCKKPAFMGHQRELAENHPYRKKSDLFDGTIEDRTL
                     PPPLDGETTLSKVANINVVLGKKGVGPPKGIWKKKSIFWKLPYWKHLRVRHCIDVMHI
                     EKNVCESLIGLLLNIPGKTKDGIKVRRDMELMNIRPELHPKDIDGRSTKFLPPACYTM
                     SKVEETKFCQCLHGIKVPSGYSTNIRKLVSMKDLKLLGMKSHDCHVLMTQMIPIAIRG
                     ILPNRIRHTITKLCLFFNMIHSKVIDPGVLDEYQRDIILTLCELEMYFPPSFFDVMVH
                     LVSHIVGEIKIPQSRHEGRLSGQGTLGRKTGYSNVFDYQEAHFNVLQHTTSIDPFIQE
                     HMSFLRQQYPKKSAKWLANQHKKTFSEWLKDKVRRTLPNIDKTVEALGFAPKHVFQYQ
                     GYDINGYTFYTKAQDKKSKTQNSGVTVIASSTEFTMVNREERSRIAKKSYYGFIQEIW
                     ELDFGDLYTIPLFKCKWVANDRGVQVDEDSFTTVNLSTNGYKEEPFILAKLVTQVFFI
                     EDPKDPRWHVVQYGK"
     misc_feature    412..1044
                     /gene="LOC139841963"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1582..>1731
                     /gene="LOC139841963"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2218..2427
                     /gene="LOC139841963"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atggaggata atgttgctga taagtatcat gacagattac aacaactatt tgttgacgct
       61 gaaaaacctt tatataccgg ttgtatgaat tttacaaaac tttccgccgt gatacaactg
      121 gttaacttaa aatcaaacaa tggttggagc gacacaagtt tcactagctt gttagagttg
      181 ttgaacaaaa tgctaccaga aggtaatgag ttgtcggttt caacctacca agcaaagaaa
      241 ttaatgtata aacgtggaaa actgactgat aatgctgata gtgatgtgtc agaaaatgga
      301 cctcctgcaa aattattgtg gtacttgcct atcataccac gattaaagag actatttgca
      361 aatgagaaag atgcaaaatt attacgttgg catgctgaag atcgtaaaaa tgatggtaaa
      421 atgcgaaatg tggccgattc acttcaatgg aaaaattttg ataaagattt tgaagaattt
      481 agggatgaga tacgtaatat aaggttcgga ctcagttcag atggaattaa tccgttcgga
      541 gatttgagta gccgtcacag cacgtggcct gttcttctat gcatttataa cctaccgcct
      601 tggctatgta tgaaaagaaa atacataatg atgtctcttt tgattcaagg cccaaagcaa
      661 cctggaaacg atattgatgt ttatttgcaa ccattagttg atgaaatgat ggaattatgg
      721 agtaccggca tatacgttta tgatgcatac aagaaagaat acttccaact atgggcaatg
      781 cttttttgca ccattaataa ttttcctgct tatggtaact tgtctggata tagtacgaag
      841 gggaaaaagg catgtcctat ttgtgaggaa aatactcact caatgaggct cacaaattgt
      901 aagaaacctg catttatggg gcatcagaga gagcttgccg agaatcaccc gtaccgtaaa
      961 aagtcagatt tatttgatgg tactatagag gatagaacac taccaccacc attggatgga
     1021 gaaactacac tctccaaagt tgctaatata aatgttgtgt tgggaaagaa aggggttggt
     1081 cctcccaaag gtatttggaa gaaaaagtct attttttgga aattacccta ctggaagcat
     1141 ttacgagtcc gacattgtat tgatgttatg catattgaaa aaaatgtttg tgaaagtttg
     1201 atagggttac tgttgaacat tcctggaaaa acaaaagatg gaattaaagt tagaagggac
     1261 atggaattaa tgaatatcag accagagcta catcctaaag atattgatgg aaggtccacc
     1321 aagtttcttc ctccggcctg ttatactatg tcgaaggtcg aggaaactaa attttgtcaa
     1381 tgtttacatg gtattaaggt tccatcagga tattctacta acattaggaa gttggtttcg
     1441 atgaaagatt tgaagctact tggtatgaag tcacatgatt gtcatgtact aatgacccag
     1501 atgattccta tagcaattcg tggaattcta cccaaccgta ttcgacacac aattacaaaa
     1561 ctatgcttat ttttcaacat gattcattca aaggtgattg atcctggtgt gctggatgaa
     1621 tatcaaagag atatcatact tactctttgc gaactcgaga tgtactttcc accttctttc
     1681 tttgatgtca tggttcattt ggtatctcat attgtaggag aaataaagat tccacaaagt
     1741 cgtcatgaag gaagactatc aggtcaaggg acacttgggc gcaagacggg ctattcaaat
     1801 gttttcgatt atcaagaggc acattttaat gtcttacaac acactacatc tattgatccg
     1861 ttcatacaag aacacatgtc gttcttgaga caacaatacc ctaaaaagag tgcaaagtgg
     1921 ttggcaaatc aacataaaaa aactttttcg gaatggttga aagacaaagt taggaggaca
     1981 cttccaaata ttgataaaac ggtcgaagct ttgggattcg cccctaaaca tgtgttccaa
     2041 tatcaaggat atgacataaa tgggtatacc ttttacacta aagctcaaga taagaagagt
     2101 aaaacccaaa acagcggtgt cacggtgata gcctcgtcga cagaattcac catggtcaat
     2161 cgtgaagaaa gatcaaggat cgccaaaaaa tcgtattatg gtttcattca agaaatatgg
     2221 gaattagatt ttggtgattt gtacactata cccttgttca agtgtaagtg ggttgctaat
     2281 gatcgcggtg ttcaagttga tgaagatagt tttacaactg ttaatctttc caccaatgga
     2341 tataaagaag aaccattcat tctagcaaaa ctagttactc aagtattctt tatcgaagac
     2401 ccaaaggatc ctagatggca tgtggttcag tatggaaaat ga
//
LOCUS       XM_071832148             375 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841965), mRNA.
ACCESSION   XM_071832148
VERSION     XM_071832148.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..375
                     /gene="LOC139841965"
                     /note="uncharacterized LOC139841965; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841965"
     CDS             1..375
                     /gene="LOC139841965"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688249.1"
                     /db_xref="GeneID:139841965"
                     /translation="MAKKGEFDQASTAFLKRECDGILRKRNLPPKLGEQGPFIIPCHI
                     KGSEMLTTLVDSRSTFGIAENLIVKVGEMEFSADFVIVDIKEDSVVPLILGRPFLETA
                     GFLFDLRVRNLTLRDWGKSISF"
     misc_feature    <163..300
                     /gene="LOC139841965"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atggccaaaa agggcgaatt tgatcaagct tccaccgcct tcctaaaaag ggagtgtgat
       61 ggaattttga gaaaaaggaa cttaccacct aaattgggcg agcaggggcc tttcataatc
      121 ccttgtcata taaaggggtc agaaatgcta accactttag ttgactcgag gtcaaccttt
      181 gggatcgctg aaaatttaat tgtaaaagtt ggagaaatgg agttttcagc cgattttgtt
      241 attgttgata tcaaggagga ctcggttgta cccctcatat tgggtagacc tttcttagaa
      301 actgcgggtt tcctgtttga cctaagggtc cgaaatttga ctttaagaga ctggggaaaa
      361 agcattagct tctaa
//
LOCUS       XM_071832149             549 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841966), mRNA.
ACCESSION   XM_071832149
VERSION     XM_071832149.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..549
                     /gene="LOC139841966"
                     /note="uncharacterized LOC139841966; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841966"
     CDS             1..549
                     /gene="LOC139841966"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688250.1"
                     /db_xref="GeneID:139841966"
                     /translation="MVAERVDVEVADATHVNTDRMWNSLAYTIKEVAKESFCVVDGTS
                     RGHKSCRESWRLSDEVQTKVAVKQLSFLELITIRDETFVDVTKVKERYRSQKRSKESS
                     SLVKEKAYEYLYRKLNSKKGANDTDRIAKARERRRRDLDNIRYIKDGVGQFSVFIFHR
                     AVMDCRWLYKFNCELKVFSLLW"
ORIGIN      
        1 atggttgctg aaagagttga tgttgaagtt gcagatgcaa cacatgtcaa cacggatcgg
       61 atgtggaata gtttggcgta taccatcaaa gaggtagcca aggaatcctt ctgtgtggtt
      121 gatggaacat cgcgaggaca taagtcatgt agagaatcat ggaggcttag tgacgaggtc
      181 caaaccaaag tcgcggttaa gcagctcagc tttttggagc tcatcactat ccgggatgag
      241 acatttgtcg atgttaccaa ggttaaagag agatatagaa gccaaaagag aagcaaagaa
      301 agtagttcac ttgtaaaaga aaaagcatat gaatatttgt atagaaaact aaactctaaa
      361 aagggagcaa atgataccga taggatagcc aaagctaggg aacgaaggag aagggatcta
      421 gataacatta gatatatcaa agatggagtt ggtcaatttt ctgtttttat cttccatagg
      481 gcagtcatgg attgcagatg gttgtataag tttaattgtg agttgaaggt tttttctctt
      541 ctgtggtaa
//
LOCUS       XM_071832150            2073 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein HIGH CHLOROPHYLL
            FLUORESCENCE PHENOTYPE 173, chloroplastic (LOC139841968), mRNA.
ACCESSION   XM_071832150
VERSION     XM_071832150.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2073
                     /gene="LOC139841968"
                     /note="protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE
                     173, chloroplastic; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139841968"
     CDS             87..1826
                     /gene="LOC139841968"
                     /codon_start=1
                     /product="protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE
                     173, chloroplastic"
                     /protein_id="XP_071688251.1"
                     /db_xref="GeneID:139841968"
                     /translation="MEGCYCPTTFSSFKLSNNQNISSFVGTRLNDRFKSVTHHRRSYE
                     LKTNKRGIYAESKKEGWDFGRFVKTLYFFNGPPSPFKIFESLIANLSGPSSSEPEKSM
                     ESSGIVLVVGATGGVGRRVVDVLQKKGLPVRVLARNEDKARKMLGPDVDLVVGDITKV
                     STLLPDYFKGVKKVINAVSVIVGPKEGDTPDRAKYSQGIKFFEPEIKGDSPEMVEYIG
                     MQNLIKALKDSVGLKTGKLVFGFEDGSSRDLPWGALDDVVMGGVSESSFQILPNGSEN
                     GGPTGLFKGIVSTANNGGFTSIRTKNFDVAENLSAYDGLELRVKGDGRRYKLIVRTSR
                     DWDTVGYTIGFDTVKDQWQSIQLSFSSLKPIFRAKTVADAQPFDSSQIISLQLMFSKF
                     EYDGKLNPTFVEGPFELPVSSIRAYIAEPITPRFVHVGSAGVTRPERPGLDLSKQPPA
                     VRLNKELGSILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGADLIFDQGDNITGKIS
                     REEVAKICVAALESPYACDKTFEVKCVVPFSEQYTVDPQNPPPEKDYEEYFKSLKDGI
                     TGKEQLEKTPVTV"
     misc_feature    408..>773
                     /gene="LOC139841968"
                     /note="Uncharacterized conserved protein YbjT, contains
                     NAD(P)-binding and DUF2867 domains [General function
                     prediction only]; Region: YbjT; COG0702"
                     /db_xref="CDD:440466"
     misc_feature    837..1319
                     /gene="LOC139841968"
                     /note="Complex I intermediate-associated protein 30
                     (CIA30); Region: CIA30; pfam08547"
                     /db_xref="CDD:462515"
     misc_feature    <1359..1682
                     /gene="LOC139841968"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; Region:
                     Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 atctgatact cccattttgg ctgcaataag aatcggaaat aagagcaaga aaaattaata
       61 ataatagtag aaataataat tattaaatgg agggttgtta ttgtcccaca acattctctt
      121 ctttcaagct ttccaataac cagaacattt catcttttgt tggtacacga ttaaatgaca
      181 gatttaagtc cgtcactcat catcgacgct catatgaatt gaagaccaac aagcggggta
      241 tatatgcaga atctaaaaaa gaaggttggg actttggcag atttgttaaa acattatact
      301 tctttaatgg acctccatct cctttcaaga tatttgaaag cctaattgca aatctgtctg
      361 gcccatcatc tagcgagccg gagaagtcta tggaatcttc tggaattgtt ttagtggttg
      421 gtgccacggg tggtgttggt agaagggtag tcgatgtctt gcaaaagaaa gggttgcccg
      481 ttcgagtttt ggctagaaac gaagacaaag caagaaagat gttaggccct gatgttgact
      541 tggttgttgg agatatcacg aaagtaagca cactacttcc tgattatttt aaaggagtta
      601 agaaagtgat taatgcggtt tcagtcatcg tgggtccaaa agaaggagat actccggatc
      661 gggccaaata cagtcaaggg atcaaattct ttgaaccaga gattaaaggt gattcacctg
      721 aaatggtgga gtatattgga atgcaaaatc tgataaaagc gttaaaggac agtgttggac
      781 ttaagactgg aaaattggtc tttggatttg aagatggttc atcgagagac ctaccttggg
      841 gtgccttaga tgatgttgtg atgggcggag ttagtgaaag ctcgttccaa atacttccga
      901 atggtagtga aaacggtgga ccaacaggtc ttttcaaagg tattgtttcg actgcaaaca
      961 atgggggttt tactagtatc aggacaaaga actttgatgt tgctgaaaat cttagtgcat
     1021 atgatggttt ggagttgcga gttaaaggtg atggacgtcg ttataaactt attgttcgaa
     1081 ctagccgtga ttgggatact gttggttaca ccataggttt cgacaccgta aaagaccaat
     1141 ggcaatctat acaattatcc ttttcttctt taaaaccgat ctttcgagca aaaaccgtag
     1201 cagatgccca gccctttgac tcaagtcaaa tcatatcatt acagctaatg ttcagtaagt
     1261 ttgaatacga tgggaaactt aaccctactt ttgtagaagg tccctttgag cttccggtat
     1321 caagcatacg cgcatatata gcagaaccaa tcaccccaag attcgtgcat gtggggtccg
     1381 cgggggttac tagacctgaa agacctggac ttgatctgag taaacaacca cctgctgtta
     1441 gattgaataa agaacttgga tctattctaa cattcaaatt aaagggtgag gatttgataa
     1501 gggaaagtgg tattccgtat acgatagtta gaccttgtgc acttactgaa gaacctgcag
     1561 gagcagatct tatatttgat caaggagaca atattactgg gaagatatca agagaagaag
     1621 ttgctaagat ttgtgtagca gcccttgaaa gcccatatgc atgtgacaag acctttgagg
     1681 tgaaatgtgt ggttccattt agcgagcaat acacggtgga tccccaaaac cctccgcccg
     1741 aaaaagatta cgaagaatac ttcaagtcct taaaagatgg cattacaggg aaagaacaat
     1801 tggaaaaaac acctgtcact gtctgaacaa accaaacgct tgtattaaag cagatgacaa
     1861 caaaggagga ccttgttata caatgaagat agatgtactc tgccctatta atttcatggt
     1921 ttggggttaa aatgtaatga gtcttactat atgataaagt tttagaactc caaaaatgta
     1981 atacatgaac ttgataaata agaaatttga actttatgac tcaaaaagag caaaatagca
     2041 gacatttata tatattctat tcaatttttg aag
//
LOCUS       XM_071832151            1770 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841969), mRNA.
ACCESSION   XM_071832151
VERSION     XM_071832151.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1770
                     /gene="LOC139841969"
                     /note="uncharacterized LOC139841969; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841969"
     CDS             1..1770
                     /gene="LOC139841969"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688252.1"
                     /db_xref="GeneID:139841969"
                     /translation="MPTFTLDDSPEVDFTTRALLIALSRKDVTSQLLNMIQAIDFVVS
                     DVGAYEKASISVLVNGSPTREFSLERGVRQGDPLSPFLFIIAAEGLNVMVKRAVCNKK
                     YIGVEIGRDKVPIPHLQYADDTIFYGEWSEENLRNLFKLLKCFEKTSGLKVNYLKSIL
                     YGVGVGKCEVENLAKSFGCNAGSFPFTYLGLPVGGRMNKIECWSPVIEKFSKRLSDWK
                     ARSFSFGGRLTLVKSIGKWWWRFKSETNSLWVKVISSIHGSSGGLSPCLDGNYYLPYN
                     SVWTNIVKAGSDIDSKGISFTNSFVRIIGNGLSTSFWNDFWLGNFSLKSRFERLFYLD
                     SDPNVTVAGRLGQSGFEGVGNWDWVREPTGRAAGSLTELKVLLQGIKLDDQKNDTWGW
                     SLSGNGFFKTKTLTGIIDSKLLKTPQSFLATLHNYLVPKKVEVFIWRVRKGRIPVLTN
                     LDKRGVDLHSVRCPICDNGVEYIQHSLLSCRKTLEIWGKIFDWWRATLPSSIDINNLI
                     EGSSNIFSSELGKNIWQAVLWSCAYLVWKNRNEKVFNNKCWNIQVAVSEIQIKSFEWV
                     AKRCKTKRIEWHDWLHNPHNAIA"
     misc_feature    <211..579
                     /gene="LOC139841969"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    223..225
                     /gene="LOC139841969"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    <1285..1458
                     /gene="LOC139841969"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcctactt tcacactgga tgatagtcca gaagtagatt ttactacgag agcattgctt
       61 atagccctct caagaaaaga tgtaacgtca caactattga atatgatcca ggccatcgac
      121 tttgttgtat ccgatgtagg tgcttatgag aaggcctcaa tctcggttct tgttaatggt
      181 tcccccactc gcgaattctc cttagaacgt ggcgtccgtc aaggtgaccc actttcacct
      241 tttttattca tcattgcagc ggaaggacta aatgttatgg taaagcgggc tgtgtgtaat
      301 aaaaaataca ttggtgtgga aattgggcgc gataaggttc ctatcccaca tctacaatac
      361 gctgatgata cgatttttta tggggaatgg agtgaagaaa atttgagaaa cctttttaaa
      421 cttcttaaat gcttcgagaa aacatcgggt ctaaaagtta attatctcaa gagtatctta
      481 tacggggttg gtgttggaaa gtgtgaagtt gaaaacttag ccaagtcttt tgggtgtaac
      541 gccggatctt ttcctttcac ttaccttggg ctaccggttg gtggtagaat gaataaaatt
      601 gaatgttgga gcccggttat tgaaaaattc tcgaaacgcc tctcggattg gaaggcacgt
      661 tcgttttcat ttggtggacg cttgaccctt gtgaaatcga ttggcaagtg gtggtggagg
      721 ttcaaatccg aaaccaactc cttgtgggtc aaagtcattt caagtattca tggttcgtcg
      781 gggggattgt caccttgtct agatgggaat tactatttac cttataactc ggtttggact
      841 aacattgtga aagcaggaag cgacattgat tcaaaaggaa tttcgtttac taactccttt
      901 gttaggatta ttgggaacgg gctttctact tctttttgga acgacttttg gcttgggaac
      961 ttctcactca aaagcagatt cgagaggctc ttttatttgg attcggaccc aaacgttact
     1021 gttgctggaa gattgggtca aagtgggttt gaaggtgtcg ggaattggga ttgggttcgg
     1081 gaacctacgg gacgagctgc gggtagcctc acagaactca aggtgctgct tcaaggtatt
     1141 aagctagatg atcagaagaa tgatacgtgg ggttggtcct taagtggtaa tggtttcttc
     1201 aaaactaaaa ctcttacggg aataattgac tcaaaattat taaaaacgcc tcaatctttt
     1261 ttggctacct tgcacaatta tttggtacct aaaaaggtag aggtgttcat ttggagggtg
     1321 agaaaaggta gaataccggt gttaacaaac ttagataagc ggggtgttga tttacattcg
     1381 gttcgttgtc caatttgtga caacggggtt gagtatattc aacactccct cttatcgtgt
     1441 agaaaaacac ttgaaatttg gggtaaaata ttcgattggt ggcgtgccac cctacctagt
     1501 agcattgata taaataatct tatagagggt agttcgaata tctttagttc ggaattgggt
     1561 aaaaatatat ggcaagcggt tttgtggtca tgcgcatact tagtgtggaa aaatcggaat
     1621 gagaaggttt tcaataacaa atgttggaat atacaggttg cggttagtga gatccaaatc
     1681 aagagcttcg agtgggttgc gaaaagatgc aagacaaaac gcattgaatg gcacgactgg
     1741 ttacataacc cacataatgc aatcgcataa
//
LOCUS       XM_071832153             480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841970), mRNA.
ACCESSION   XM_071832153
VERSION     XM_071832153.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..480
                     /gene="LOC139841970"
                     /note="uncharacterized LOC139841970; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841970"
     CDS             1..480
                     /gene="LOC139841970"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688254.1"
                     /db_xref="GeneID:139841970"
                     /translation="MSGQLFIRICQGIINYSQEPISDYFLYFRQRRDATGLLGFNVIQ
                     KCTSAIRQLAYCTAPDAFDEYLHMCQQTSYDCLNNFCKSVFHLYANEYLRKPTPQDVQ
                     RLVNAHAEIHGFPGMLGSLDCMHWAWKNFPYRYKGHYTRGDHGYPTIMLEAVASYDL"
     misc_feature    271..>477
                     /gene="LOC139841970"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagtgggc aactgttcat acgcatatgc caaggtataa ttaattattc tcaagaacct
       61 atttcggatt atttcttata ttttcgtcaa aggcgggatg ctaccgggtt gcttggtttc
      121 aatgttattc aaaaatgcac atccgcaata cgacaattag cgtactgtac tgcacctgat
      181 gcttttgatg agtacttaca tatgtgtcaa caaacgtcat atgattgttt gaataatttt
      241 tgtaaaagtg tatttcattt gtacgctaat gaatatttga gaaaaccgac tccacaagac
      301 gtacaacgtc ttgtaaacgc gcatgctgaa atacacggtt ttccgggcat gttgggtagt
      361 ctagattgca tgcattgggc atggaaaaat ttcccatata gatacaaagg tcattataca
      421 agaggcgatc atggataccc aacaatcatg ttagaagcgg ttgcatcgta tgacttatga
//
LOCUS       XM_071832154             672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841971), mRNA.
ACCESSION   XM_071832154
VERSION     XM_071832154.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..672
                     /gene="LOC139841971"
                     /note="uncharacterized LOC139841971; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841971"
     CDS             1..672
                     /gene="LOC139841971"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688255.1"
                     /db_xref="GeneID:139841971"
                     /translation="MDLKGEAIRSPSPSVWKNILIAGTHIQELGVDFKESFIIKVNKR
                     SQLSFWDSKWLINGKLKTKFPRLFLLDSDKDARIVDRVHESDSGITVTSCWSRQPSGR
                     TLGELSELQQHVSGYCFEETGHDTCSWALSHNGIFTLRSLSLILDDLSIANTYVEETM
                     CNNLVPKKVEIFVWRLCKKRLPVKTELDKRGIDLHSVRYLLCDDDLETVEHSFIFCKC
                     AMEVW"
     misc_feature    <484..666
                     /gene="LOC139841971"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggatttga agggcgaagc aattcgttct ccaagtccta gtgtgtggaa aaatatcctt
       61 attgcaggta ctcacattca agaattgggg gtcgatttca aggaatcctt catcattaaa
      121 gtgaataaaa gatcgcagct gagtttctgg gactccaagt ggctgattaa tggcaaattg
      181 aagacaaaat tcccaagact gtttctctta gactctgata aggatgcacg aattgttgat
      241 cgggtccacg agtcagattc tggtataacg gtgacaagtt gctggtcgag acagccttct
      301 ggtcgcacat tgggtgaact ttctgagcta caacaacacg tgtcaggtta ttgctttgaa
      361 gagacgggtc acgatacgtg ttcttgggca ttatcacata atggtatttt cactttacga
      421 tctttatctc ttattcttga tgatctttca attgcaaata cttatgtcga agaaaccatg
      481 tgtaataact tggttccaaa aaaagtcgaa atattcgttt ggcggttgtg taaaaaaaga
      541 ctccccgtca aaaccgagct tgacaaaaga ggtatagatt tacatagtgt aagatacctg
      601 ttatgtgatg atgatctaga aaccgttgag cactcgttta ttttttgtaa atgtgcgatg
      661 gaagtttggt ga
//
LOCUS       XM_071832155            1470 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nuatigenin
            3-beta-glucosyltransferase-like (LOC139841972), mRNA.
ACCESSION   XM_071832155
VERSION     XM_071832155.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1470
                     /gene="LOC139841972"
                     /note="nuatigenin 3-beta-glucosyltransferase-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139841972"
     CDS             1..1470
                     /gene="LOC139841972"
                     /codon_start=1
                     /product="nuatigenin 3-beta-glucosyltransferase-like"
                     /protein_id="XP_071688256.1"
                     /db_xref="GeneID:139841972"
                     /translation="MSPEKNYPSELATNDGNFHVVFLPLLCASHMMPLVCVARLFAAR
                     GVRSTIVTSSHTLPMFQDNINFDIARGYPISFHTVNIPPWNGLAQINVVRKPMEQAVR
                     DLVPNCIFSDMFLTWTVDLADELKIPTLMFYPDSMFFHSVLYSLKVHYSSTIAKSEDG
                     TFVVPNLPDKVTMKRPEVPDGVKLNTMFGDLIDAMFRSEKRSYGLVHNSFYEIEPAYA
                     DHMKKSVNGPKIWHIGPLFQFFNNNNSDCLTKTFVLEKPYMFTRLPGLSNMHESLYWL
                     DTQKPKSVIYACFGSMTTFPAAQITEIALALEECDQPFVWVVKKKDDNREEIDGLPEG
                     FEERIMKANKGFIITEWAPQVEILQHFAVGRFFTHCGWGSVLEAVVAGVPLVTWPLTA
                     DHFENEKLVELLGIGVKVGAEVWNPDFDITSPVIGKQMIVEAIAKLQDGSDMVEIIKR
                     NLKELSMKAKRSVHKGGSSANSLASLIEDIKAFRFTPKA"
     misc_feature    55..1440
                     /gene="LOC139841972"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(85..90,94..96,520..522,529..534,574..576,682..684,
                     871..873,1105..1107,1111..1113,1117..1122,1129..1131)
                     /gene="LOC139841972"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(85..87,871..873,1105..1107,1111..1113,1117..1122)
                     /gene="LOC139841972"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    88..90
                     /gene="LOC139841972"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     misc_feature    order(130..132,319..321,1420..1425,1432..1434)
                     /gene="LOC139841972"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340817"
ORIGIN      
        1 atgtcgccgg agaagaatta tccgtctgaa ctggcaacca acgacggcaa ctttcacgtc
       61 gtgttcctcc ctttattatg tgccagccac atgatgcctc tagtctgcgt tgcaagactg
      121 tttgcggccc gtggcgtccg ttcaaccatc gttacatcga gccatactct ccccatgttt
      181 caggacaaca ttaacttcga tatagcccgt ggttacccga tttcgtttca caccgttaac
      241 attccgccgt ggaatgggtt agctcaaata aacgttgtcc gaaaaccaat ggaacaagcg
      301 gttcgagatc ttgttccaaa ttgtatattt tcggacatgt ttcttacatg gaccgttgac
      361 ttggcagatg aactcaaaat ccctacattg atgttttatc cagatagtat gttttttcat
      421 tctgttttat atagtctgaa agtgcactat tcgagtacta ttgcgaaatc ggaagatggg
      481 acctttgttg ttccgaattt acccgataaa gttaccatga aacggccaga ggtccctgat
      541 ggtgtcaagt taaacacaat gtttggtgat ctgatagacg ccatgttccg atcagagaag
      601 cgaagttatg gattggttca taattcgttt tatgagattg aaccggcgta tgctgatcat
      661 atgaagaaga gtgttaacgg accgaaaatt tggcatattg gtcctttgtt ccaatttttc
      721 aacaacaata atagtgattg tttgacgaag acgtttgtac tggaaaaacc ttacatgttt
      781 acccgtttac ctggtctgtc gaatatgcac gaatctctct attggcttga cactcaaaag
      841 cctaaatcgg ttatatacgc gtgttttgga agtatgacaa cgtttccggc agctcaaatt
      901 acggaaatcg cgttggcgct agaagaatgc gaccaaccgt ttgtttgggt ggttaaaaag
      961 aaagacgata atcgagaaga aatcgatggg cttccggaag ggtttgagga gcgaattatg
     1021 aaggcgaaca agggtttcat cattactgag tgggccccac aagttgaaat actacaacat
     1081 tttgcagttg gaagattctt tactcattgt ggatggggat cagtgcttga agctgtggtt
     1141 gctggggtgc cattagtgac gtggccatta accgcggatc attttgaaaa cgagaaattg
     1201 gttgagcttt tgggaattgg agttaaggtt ggtgcagagg tttggaaccc ggatttcgat
     1261 attaccagcc cagtgattgg gaaacaaatg attgtagaag cgattgcgaa attacaagat
     1321 ggatcagata tggttgaaat catcaaacgt aatttaaaag agttaagtat gaaagcgaaa
     1381 cggagtgtgc ataaaggtgg gtcgtctgct aacagtttag cttcattgat agaagatatt
     1441 aaagctttta ggttcactcc taaggcgtga
//
LOCUS       XM_071832156             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g67623 (LOC139841973), mRNA.
ACCESSION   XM_071832156
VERSION     XM_071832156.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139841973"
                     /note="putative F-box protein At1g67623; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139841973"
     CDS             1..567
                     /gene="LOC139841973"
                     /codon_start=1
                     /product="putative F-box protein At1g67623"
                     /protein_id="XP_071688257.1"
                     /db_xref="GeneID:139841973"
                     /translation="MVKLVCKAFWKLSDDALVYKRLSFDRWCISPWGNHKLADIFISS
                     MYFGNPNAIFRYGLRAYFDSKYPDVGLHLLEKASDMQLKEACYVYGLVMFASHQIENK
                     DIGLQILNQTFPPVLDLVVEVRTKVFDLLRCCWVLFNHHPFDDVATCCTIKVHNGYFP
                     LDHGWEIILTKPECMSCFWSYEFRVFAQ"
ORIGIN      
        1 atggtgaagt tggtttgcaa agcattttgg aagctttccg atgatgcttt ggtttataaa
       61 aggctttcct ttgataggtg gtgtatctca ccttggggaa accataagtt ggcagatatt
      121 ttcatttctt ctatgtattt tggaaaccct aatgcgattt ttcgctatgg tttgagggct
      181 tattttgatt ctaaataccc cgatgtaggg cttcatttat tagaaaaagc ttcggatatg
      241 caacttaaag aggcatgtta tgtttatggt ttagtcatgt ttgcctctca ccaaatagag
      301 aataaggaca tcggattaca aattcttaat caaacatttc caccggtgct ggatttggtg
      361 gttgaggtga gaaccaaggt ttttgatttg ttgcgatgct gttgggtatt atttaatcac
      421 catccttttg atgacgtcgc aacgtgctgc actatcaagg tccacaatgg ttattttcca
      481 cttgaccatg ggtgggaaat tatattgact aaaccagaat gcatgtcttg tttttggtcc
      541 tatgagttcc gtgtttttgc tcaatga
//
LOCUS       XM_071832158             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841976), mRNA.
ACCESSION   XM_071832158
VERSION     XM_071832158.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139841976"
                     /note="uncharacterized LOC139841976; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841976"
     CDS             1..660
                     /gene="LOC139841976"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688259.1"
                     /db_xref="GeneID:139841976"
                     /translation="MNAMQVCIPGGNKITSSGECKKFQWQMNGKEFIDDMVIIPIRGC
                     DMVLGIQWLKRLGNIMWNFDELKMVFTYNKDRIVLRGAKKAPLQWIKGKQLDKNCAQQ
                     GAYLASVCLCVYPVTCYDMSTQHKSSVEVEPQITQLLEKYADIFKVPTKLPPKRSHEH
                     RIPLKDGTFPINVRPYRNPPAQKDAIETMVAELLDTGFIRASQSPFSAPILMVKKKDG
                     S"
     misc_feature    <10..162
                     /gene="LOC139841976"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(16..27,37..48)
                     /gene="LOC139841976"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    508..>654
                     /gene="LOC139841976"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgaatgcta tgcaggtctg tataccaggg ggtaacaaga ttactagttc tggggagtgc
       61 aaaaagtttc aatggcaaat gaatggtaaa gaatttattg atgatatggt gattatacca
      121 attaggggct gtgacatggt tttgggcata caatggctca agaggttggg taatatcatg
      181 tggaattttg atgaactaaa gatggttttc acttacaata aagatagaat tgttctaaga
      241 ggagcaaaaa aggcaccatt acagtggatc aagggtaaac aattggacaa gaactgtgct
      301 caacaagggg cttatctggc atctgtgtgt ctatgtgttt atcctgtcac ctgttatgac
      361 atgagcacac aacataagag ttcggtggaa gtagagccac aaattactca acttttggag
      421 aaatatgctg acatatttaa ggtaccaact aaacttccac caaaaagaag tcatgagcac
      481 agaattcccc tgaaggatgg aacatttcca attaatgtga gaccatatag gaatcctcca
      541 gcccagaaag atgccataga aaccatggtt gctgaattac ttgacacagg attcataaga
      601 gctagtcaga gtccattttc tgcacctata ttaatggtta agaagaaaga tggcagctga
//
LOCUS       XM_071832159            1563 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841977), mRNA.
ACCESSION   XM_071832159
VERSION     XM_071832159.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1563
                     /gene="LOC139841977"
                     /note="uncharacterized LOC139841977; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841977"
     CDS             1..1563
                     /gene="LOC139841977"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688260.1"
                     /db_xref="GeneID:139841977"
                     /translation="MVDFMVEFICVVPPAPIFEEVPNIVTWELFTDGASSSDGAGAGL
                     ILIGPDGEEHTYVLRFKFPASNNEAEYEALLSGLRMAEKMGIKYLKVSVDSQLVANQM
                     NGTFEARDPAMQNYLELAEEMANKFERFSITQVPRSWNKKADAVSKLASSVFSHFAKD
                     VWVEVLSQKSIDVVQEATLVEEVETWMSLIVTFLKNGMLPVDGATARKIRMKAPMYML
                     RDGVLFKKSFTAPLLRCVGPSEAETIVREVHEGTCGMHAGFRTVVGKIMRLGYFWLSM
                     YGDTKEIIKACASCQRHASKIHMSTHELIPMTSAWPFYKWAIDLVGPFPDGKHLVVAI
                     DFFTKWVEAKPLKSITGKQIVNFVWEEIVCRFEIPHEIVSDTGKQFAHDPFRSWCDGL
                     NIKQTFSSVAHPQANGQVEVTNRDIVSGIRARLDTHRKGWVDELPQVLWAFRTTPKGS
                     NREMPFSLVYGTEVVIPAEIDVPTQRVVQFNDESNIISLKENLDLLEERRDAAAIREA
                     SNKQKIAKYYNQ"
     misc_feature    79..456
                     /gene="LOC139841977"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(94..105,193..201,208..210,280..282,400..402,
                     442..444)
                     /gene="LOC139841977"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    706..888
                     /gene="LOC139841977"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    <928..1251
                     /gene="LOC139841977"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atggtagatt ttatggttga attcatatgc gtcgtaccac cagcgccgat cttcgaagaa
       61 gtaccaaata ttgtcacgtg ggaactattc actgacggag catcgagttc tgacggagcg
      121 ggtgcaggtc taattttaat tggccctgat ggagaggaac atacctacgt gttgcgtttc
      181 aagttccccg cctccaataa tgaagcggaa tatgaggcat tgctgtcagg tttgagaatg
      241 gctgaaaaga tgggaataaa atacctaaag gtgtcggttg attcccaact cgtggcgaat
      301 cagatgaacg ggacgtttga agctagggat ccggctatgc aaaattattt ggaattggca
      361 gaagaaatgg ccaacaaatt cgagcgtttc tcaataacgc aagtgccgcg atcctggaac
      421 aaaaaggccg acgcagtcag caaactcgca tcaagcgtgt tcagccactt cgccaaggac
      481 gtttgggtgg aggtccttag tcaaaaatcc attgatgtgg tacaggaggc aacccttgta
      541 gaagaggtcg agacgtggat gagtctcatc gttacgtttc tcaagaatgg tatgttgcca
      601 gtcgacgggg caacggcacg taagattcgt atgaaagcac ctatgtacat gttaagggat
      661 ggagttctgt tcaagaaatc cttcacggca ccgcttttaa ggtgtgtcgg cccaagcgag
      721 gcggaaacaa tcgtaaggga ggtgcatgaa gggacttgtg gcatgcatgc aggatttagg
      781 accgttgtgg ggaagataat gcggctaggg tacttttggc tgtccatgta cggtgacacg
      841 aaagagatca tcaaagcttg tgcttcatgc caacgtcacg cctcgaaaat tcacatgtcg
      901 acgcatgagc taatccccat gacgtctgct tggccctttt acaaatgggc aattgatttg
      961 gtaggcccct tcccggatgg aaaacacttg gtcgttgcaa ttgacttttt caccaagtgg
     1021 gttgaagcca aacctttaaa gagcataacg ggtaaacaga ttgtgaattt tgtttgggag
     1081 gaaatcgtgt gccgtttcga aataccacac gaaattgtaa gtgataccgg caaacagttt
     1141 gctcacgatc cgtttcgttc atggtgtgac gggttgaata tcaaacagac tttcagttct
     1201 gttgcccatc cgcaggcaaa tgggcaagtc gaagtcacca acagggatat cgtttccggg
     1261 ataagggcaa ggttggacac gcacaggaaa ggttgggtag atgagcttcc acaagtatta
     1321 tgggcattcc gaaccacgcc aaaaggaagc aatcgagaaa tgccattcag ccttgtatat
     1381 ggtaccgagg tggtgatacc cgctgaaatt gatgtcccaa cccaacgtgt agtgcaattc
     1441 aatgatgagt cgaacatcat tagcttgaaa gaaaatttgg acttgttgga ggaaaggcgt
     1501 gacgccgccg ctatcaggga agcgtcaaac aaacagaaaa ttgccaaata ttacaatcaa
     1561 tga
//
LOCUS       XM_071832160             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841978), mRNA.
ACCESSION   XM_071832160
VERSION     XM_071832160.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139841978"
                     /note="uncharacterized LOC139841978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841978"
     CDS             1..555
                     /gene="LOC139841978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688261.1"
                     /db_xref="GeneID:139841978"
                     /translation="MVYASLVILIVQVILREEIDGRKVNFTIKIKVVHLLQKVGYGYD
                     EGKPTLELIVSDEEGPKIVINIRNSLKAKFDNHIREWVFFCISNAAVVDSPLQYRTKH
                     IQHEYKLMFTKKTTVVPFPPTEWRRTNGFSFIPFDILRSKGLKVGVSVDVIGRIANYS
                     EVQNFRNTGELKSKYINLQLIDLE"
     misc_feature    79..351
                     /gene="LOC139841978"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(79..81,241..243,247..249,259..261,346..348)
                     /gene="LOC139841978"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(94..102,151..162,166..168,187..195,199..201,
                     268..276,322..330)
                     /gene="LOC139841978"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggtgtatg caagtttggt gattttgatt gtgcaagtca tcttgaggga agagattgac
       61 ggaaggaaag ttaattttac cataaaaatt aaagtcgtcc atctccttca aaaggttgga
      121 tatggttacg atgaaggcaa gccaactttg gagctaatcg tttcggatga ggagggccct
      181 aagattgtca tcaacattcg taactccctt aaggccaaat ttgataacca cattagggaa
      241 tgggtcttct tttgtatttc taatgctgct gtagttgata gtccgctaca ataccggacc
      301 aaacatatcc aacatgagta caagctcatg tttactaaga aaacaactgt tgtgccattc
      361 cctccaaccg aatggagaag aactaatggt tttagtttca tcccttttga tattttgaga
      421 tctaaaggcc ttaaagttgg agtttcagta gatgttattg gacgtatagc aaattattct
      481 gaagtacaga attttcgaaa cactggtgaa ctcaagtcca agtacatcaa tcttcagctc
      541 attgatttag agtaa
//
LOCUS       XM_071832161             507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g67623 (LOC139841979), mRNA.
ACCESSION   XM_071832161
VERSION     XM_071832161.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..507
                     /gene="LOC139841979"
                     /note="putative F-box protein At1g67623; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139841979"
     CDS             1..507
                     /gene="LOC139841979"
                     /codon_start=1
                     /product="putative F-box protein At1g67623"
                     /protein_id="XP_071688262.1"
                     /db_xref="GeneID:139841979"
                     /translation="MDQLSKNIRDVLPNDIVGGILSRVSQQSSVHLSFARLVCKDFLK
                     QSEHYLVYRRLSLDRWPILAWGIPEMVYLLHQCVINKNPNAIFRLGLISYFDGVNTDL
                     GLRYLEEASNNGLNQAVYVYGLIMFSSHDLEEKDKGLKILNARFPPLPDLVVSVRMDV
                     YGLLQQLW"
ORIGIN      
        1 atggatcaac tttcaaagaa tattcgagat gttcttccta atgacatagt tggtggaata
       61 ttgtcaagag tcagtcaaca atcatcagtt cacttgtctt ttgccagatt agtttgcaaa
      121 gactttctta agcaatccga acattatttg gtttatcgaa ggctttcctt agatcggtgg
      181 cctatcttag cttggggtat cccagaaatg gtctatcttc tccatcagtg tgtgataaat
      241 aaaaacccta atgctatttt tcgattaggt ttgataagtt attttgatgg agtaaacaca
      301 gacttagggc ttcgttattt agaagaagct tcaaacaatg ggctgaatca ggcagtttat
      361 gtttatggtt tgatcatgtt ttcatctcat gatttggagg aaaaggataa gggtttaaaa
      421 atacttaatg caagatttcc accattgccg gatttggtgg tttctgttag aatggatgtt
      481 tatggtttgt tacagcaatt atggtga
//
LOCUS       XM_071832162             657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841980), mRNA.
ACCESSION   XM_071832162
VERSION     XM_071832162.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..657
                     /gene="LOC139841980"
                     /note="uncharacterized LOC139841980; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841980"
     CDS             1..657
                     /gene="LOC139841980"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688263.1"
                     /db_xref="GeneID:139841980"
                     /translation="MGGKVDDIVNKGRGPYTFYIRGQNCHQYGGLLPTDGRKPRFRQL
                     YIYDTVNEKNNRKEAISGKNKTKPSSSRYSLDGDHIRQIMEVLDEHNPLVKTFRMARD
                     RFLETPNLQMKIKLIGRRTKDGRNYNLPTVDEVAALIVGDINVSSYDGRDIVIDSRIE
                     GLKRISELHTEYLALQYPLLFIYAEDGYRTDILHRDVDEHSTRVKKRVTMREFFAYKL
                     "
ORIGIN      
        1 atggggggca aggtggacga tattgtaaac aaaggtcgtg gcccttatac attttatatt
       61 cgtggtcaaa attgtcacca atatggaggt ttattaccaa cggatggccg aaaaccaaga
      121 ttcagacagt tatacatata tgatactgta aatgaaaaaa ataacaggaa agaagcaatc
      181 agtggcaaaa acaaaacaaa gccttcgtct tcacgctatt cactagacgg ggatcacatt
      241 cgtcaaataa tggaagttct cgatgaacat aatcctcttg tcaagacatt tcggatggct
      301 cgtgatcggt ttctagaaac acctaatttg cagatgaaaa ttaagttaat tggtagacga
      361 acgaaagatg gacgtaatta taatctgcca acggtagacg aagtagcagc acttattgta
      421 ggtgatatca atgtttcttc atatgacgga agggatattg taatagacag tcgtattgaa
      481 gggttaaaaa gaatttctga gcttcacacc gaatatttag ccctacaata tccacttcta
      541 tttatttatg cagaagatgg gtacaggaca gacattctgc atcgtgatgt cgatgagcat
      601 tccacaagag tgaaaaagag ggttactatg cgtgaattct ttgcatataa actttaa
//
LOCUS       XM_071832163             642 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841981), mRNA.
ACCESSION   XM_071832163
VERSION     XM_071832163.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..642
                     /gene="LOC139841981"
                     /note="uncharacterized LOC139841981; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139841981"
     CDS             1..642
                     /gene="LOC139841981"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688264.1"
                     /db_xref="GeneID:139841981"
                     /translation="MGGGKGIQNFFWEDIVFKFGISNEIVSENDTKFEGETFRSWGIK
                     AQLGLYGNEWVDELPSILWAHRTIHKNSTGETPLSLVYGTEAIIPAEMLVPTKRIRSF
                     NESSNDEGLRANQDMLEELREIAAIREAVNKQKISKYHDKHVKPMSFRIGDYVWHNNE
                     VSRAENTGNLGPNWEGPYEVIDKSATRSYILAGINGERVPHTWHATILKRCYI"
ORIGIN      
        1 atgggtggag gcaaaggcat tcaaaacttc ttttgggaag acattgtgtt caagtttggt
       61 atctccaatg aaattgtcag cgaaaacgac accaagtttg agggagaaac ctttagatcc
      121 tggggaataa aagcgcaatt gggattatac ggaaatgagt gggttgatga gctccctagt
      181 attttatggg cgcatcgtac tatacacaag aatagcacag gtgaaacacc attaagttta
      241 gtgtatggaa cggaagctat catccccgct gagatgttgg ttccaacaaa gcgcatacga
      301 agctttaatg agtcaagtaa tgatgaaggc ttgcgtgcta atcaagatat gctagaggag
      361 cttagagaga tagcagccat acgcgaagcc gtcaacaaac aaaaaatctc aaagtatcat
      421 gataaacacg tcaagccaat gtcatttaga attggggatt atgtatggca caataacgag
      481 gtgagtcgcg cagaaaatac tggaaatctt gggccaaact gggaaggtcc ttatgaagtt
      541 attgacaaaa gtgcgacgag atcttatatc cttgcaggaa ttaatggaga acgagtgcct
      601 catacttggc atgcaaccat tttgaaaaga tgttacatat aa
//
LOCUS       XM_071832164             651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841983), mRNA.
ACCESSION   XM_071832164
VERSION     XM_071832164.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139841983"
                     /note="uncharacterized LOC139841983; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841983"
     CDS             1..651
                     /gene="LOC139841983"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688265.1"
                     /db_xref="GeneID:139841983"
                     /translation="MLYGRKCRTPICWGEIGEKELGGSDLVLKTNEKIEVIRERLKAT
                     QDRQKSYVDRRRRPIEFKEGDMVMLKVSPWKDIIRFRKRGKLGPRYIGPFKILERVGE
                     VAYRLELPEKLSGIHNTFHVSHIRKCLTAQSTIVPLKEVEVNDKLGYIEESVDIVDEQ
                     IRKIRNKPIKSFKVKWKYGKETEYTWETEEFMVKHFPSSHLAWITRTRSDLSREEL"
ORIGIN      
        1 atgctttatg ggagaaagtg tcgcaccccg atttgttggg gtgaaattgg tgaaaaagaa
       61 ttgggtggat ctgaccttgt gttgaaaaca aatgaaaaga ttgaagttat tcgagaacgt
      121 ttgaaagcca cccaggatag acaaaaatca tatgtagata gacgtaggag accaattgag
      181 tttaaggaag gtgacatggt gatgttaaaa gtgtccccgt ggaaagatat tattcggttt
      241 agaaaacgag ggaaacttgg tcctcgttac atcgggcctt ttaaaatctt agagcgggtt
      301 ggcgaagtag cttatcgttt ggaattgccc gaaaagttgt cgggaattca taatactttc
      361 catgtttctc atataaggaa gtgtttaacc gcacaatcta caattgtgcc cttaaaagaa
      421 gttgaggtga atgataaatt gggatatatc gaggaatcgg ttgatattgt tgatgaacaa
      481 ataaggaaga ttcgtaataa gcctattaaa tcttttaaag taaaatggaa gtacgggaaa
      541 gagacagagt atacgtggga aacggaggaa tttatggtca agcactttcc atcaagtcac
      601 ttagcttgga tcacgaggac aagatccgat ttaagtaggg aagagttgta a
//
LOCUS       XM_071832165            2958 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841984), mRNA.
ACCESSION   XM_071832165
VERSION     XM_071832165.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2958
                     /gene="LOC139841984"
                     /note="uncharacterized LOC139841984; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841984"
     CDS             1..2958
                     /gene="LOC139841984"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688266.1"
                     /db_xref="GeneID:139841984"
                     /translation="MANEDNVDSSIPNEDQVNRPNGDEIRSSNDLKSLLGQALQNSTP
                     FIVQQIKKTMEEAVNITIASMIKETVKEELDRQMPQVQEEEGDQRNIEGARVNHEIAP
                     LKPYGLKDFKLGNPPTYEESLDPIVSSRWVTDIEACFRTTRCPDDLKTTFGTSMFRGL
                     AQRWWNDLLVVKGSNYPDKITWEEFKVEFFKNFRSEGEVERLLREEIRERIIISQFHS
                     FTALIDAARDIEDELKKKGATTPRKEGFVPKRKFEQSNSPPKKGKGVSDGKKGGNPTS
                     VPICFSCGKPGHYARDCKAPVLKPLICHNCLHEGHKKAECPQLSESERKEEQRKEVVR
                     RLEKSAGNPKGRSFQMTIDEARKSSEVVTGNFLVNSIPTKVLFDSRADRSFVAIRFAP
                     CLNKLLLKLELPLEVEIADDKPKLVVGVYKNCNIDINSKLFDVDLIPMTMGEFAVIIG
                     MDWLSWHGANIVCDEKIIRVKTPSEEEMIIQGEGQRRPVSICTYARARRLMSSGCATF
                     LAHVIDSRRESKSINYIPVVNEFEDVFSDDLPGIPPERQVEFSIELVSGATPIAKTPY
                     RLAPTEMQELISQIQELLDKCFIRPMMPFRLTNAPAAFMGVMNRICRPMLDKSVIVFI
                     DDILIYSKNEKDHEHHLREVLETLRKEKLYAKFLKCEFWLREVQFLGHIINENGIQVD
                     LEKIEAIEKWDRSTTPTEIRSFLRLAGYYRRFIQDFSKVASPLTKLTRKNVRFDWGEE
                     QEVAFRLLKQKLSQAPVLVLPEGIEDMTVYCDASVNGLGCVLMQRGRVIAYASRQLKE
                     HEKNYPGPDLELAVVVHALKIWRHYLYGVKCTIYTDHKNLKYLFEQRDLNNGQQRWMD
                     LLKDYDCKILYHPGTGNVVAYALSRKSRRPGIQIESLRMTITNDFLQRISRAQVEAIV
                     ELSHEERMKGQVDFLEQDSRGLLTRYGRLWVPKHGGARQLLLDEAHKSKYFIHPSATK
                     MYHDLKEEYWWPY"
     misc_feature    <838..>951
                     /gene="LOC139841984"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    1030..1428
                     /gene="LOC139841984"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1132..1134,1138..1140,1144..1146,1219..1227,
                     1342..1344)
                     /gene="LOC139841984"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1132..1140
                     /gene="LOC139841984"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1132..1134
                     /gene="LOC139841984"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1219..1230,1240..1251)
                     /gene="LOC139841984"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    <1777..2022
                     /gene="LOC139841984"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    1786..1788
                     /gene="LOC139841984"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    2302..2646
                     /gene="LOC139841984"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty3; cd09274"
                     /db_xref="CDD:260006"
     misc_feature    order(2314..2325,2410..2418,2425..2427,2500..2502,
                     2599..2601,2641..2643)
                     /gene="LOC139841984"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260006"
     misc_feature    2833..>2952
                     /gene="LOC139841984"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggctaatg aagataatgt tgatagttct attccaaatg aggatcaagt taaccgtcct
       61 aatggggatg agatccgttc aagtaatgat ttaaagtctc tgttgggaca agctctacag
      121 aattccactc cattcattgt ccaacaaatt aaaaagacga tggaagaggc agttaatata
      181 accatagcct caatgattaa ggaaacggtg aaagaagaac ttgatcggca gatgccacaa
      241 gttcaagaag aagagggaga tcagaggaat atcgagggtg ctcgggttaa tcatgaaata
      301 gccccactaa aaccctatgg tttgaaagac ttcaaattag gcaatcctcc tacgtatgag
      361 gaaagtcttg atccgattgt aagtagtcgt tgggttaccg atatagaagc gtgctttcga
      421 acaacccgat gtcctgacga tttgaaaact acatttggga caagtatgtt tagagggtta
      481 gctcagcgat ggtggaatga tcttttggtg gttaagggaa gtaattatcc tgataagata
      541 acttgggaag aattcaaagt tgagttcttt aagaacttta ggtcggaggg ggaggtagag
      601 cgcttgttaa gagaggagat ccgagagagg atcattatat cacaattcca ttccttcacc
      661 gctttgattg atgcggcaag ggatattgaa gatgaattga agaagaaggg ggcgactacc
      721 ccgagaaagg agggttttgt tcctaaaaga aaatttgagc aaagtaattc ccccccaaaa
      781 aagggtaaag gtgtgagtga cggaaagaag ggaggaaatc cgacatcagt tccgatatgt
      841 ttttcttgtg gcaagcccgg tcattatgca agagattgca aggctcctgt tttgaagcct
      901 ctcatatgcc ataattgtct tcatgaaggc cacaaaaagg ctgagtgtcc tcaattgtct
      961 gaatctgaaa gaaaggaaga acaaagaaag gaagttgtaa gaaggttgga aaagtcagcg
     1021 ggtaacccaa agggaaggtc ctttcaaatg actattgacg aggctcgtaa atcatcagaa
     1081 gttgtgacag gtaactttct tgttaattcc atacccacta aagtattatt tgattccaga
     1141 gcagaccgtt catttgttgc tattaggttt gctccttgtt tgaataaatt gttgttaaaa
     1201 ctagagcttc cattagaagt agaaatagcg gatgataaac ccaaattagt cgtaggtgta
     1261 tacaagaatt gtaatattga tataaattct aaattgtttg atgttgacct aatccccatg
     1321 accatgggtg agtttgctgt gattatagga atggattggc tcagttggca cggggctaat
     1381 attgtttgtg atgaaaagat tattcgggtg aaaaccccaa gtgaggaaga aatgattatc
     1441 caaggagaag gacaaagacg acctgtttct atatgcactt atgctcgtgc acgtcgtctt
     1501 atgtctagtg gttgtgcaac ttttttggct cacgttattg actctagaag agaatcaaaa
     1561 tccattaatt acatccccgt tgttaatgaa tttgaagatg tgttttcgga tgatcttccg
     1621 ggtattcctc ctgagagaca agtagagttt agcatcgaat tggtttcggg cgctacgccc
     1681 attgctaaga ctccttaccg cttagcacca actgagatgc aggaattgat tagtcaaata
     1741 caagaactat tggataaatg ctttattcgt ccaatgatgc cttttcgtct tacaaatgca
     1801 cccgctgcat ttatgggcgt tatgaatcgg atatgccgtc ctatgttaga taagtcagta
     1861 attgtgttta ttgatgatat actcatatat tctaagaatg agaaagacca cgagcatcat
     1921 ttaagagaag ttttagagac gttacgtaaa gagaagttat acgctaaatt tttaaagtgt
     1981 gaattttggt taagagaagt gcagtttctt ggccacatta ttaatgagaa tggaattcaa
     2041 gttgatctcg agaagattga ggcgatagaa aagtgggatc gatcgactac gccgacggag
     2101 attcgaagct ttcttaggtt ggccggttac taccgacggt ttattcaaga tttctctaag
     2161 gttgcttctc cgttgactaa gttgactcga aagaatgtaa ggtttgattg gggagaagag
     2221 caagaggtag cttttcgatt attgaaacaa aagttaagcc aagctccggt gttggtacta
     2281 ccggaaggaa ttgaagatat gactgtgtat tgtgatgcat cggtcaatgg tctaggatgc
     2341 gttttaatgc aaagggggag agttattgct tatgcctcaa ggcaattgaa agagcacgaa
     2401 aagaattatc ctggtcctga tcttgaattg gcggttgtgg tccatgcttt aaaaatttgg
     2461 cgtcattatt tgtatggcgt taaatgtacc atttatacgg atcacaaaaa cttgaagtac
     2521 ttatttgaac aaagagatct aaataacgga caacaaagat ggatggatct cttaaaagat
     2581 tatgattgca agatacttta ccatcctggt acaggtaatg tagtggcata tgcgttaagt
     2641 agaaaaagcc gacgtccggg gattcaaatt gagtccttaa ggatgaccat tacaaacgac
     2701 tttcttcaaa ggatttctag ggctcaagta gaagcgattg tagaattgtc tcatgaagag
     2761 cgaatgaaag ggcaagtaga ctttcttgag caggattcgc ggggattatt gacccgttac
     2821 ggtagacttt gggttccaaa gcacgggggt gctagacaat tattacttga tgaagcgcat
     2881 aaatcaaagt atttcattca tcccagtgcg actaaaatgt accatgattt gaaagaagag
     2941 tattggtggc cctattga
//
LOCUS       XM_071832166            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841985), mRNA.
ACCESSION   XM_071832166
VERSION     XM_071832166.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139841985"
                     /note="uncharacterized LOC139841985; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841985"
     CDS             1..1038
                     /gene="LOC139841985"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688267.1"
                     /db_xref="GeneID:139841985"
                     /translation="MIFWAPAIAAAISNVFPEVFHALCARHLLGNLKSVSKRVKSYEW
                     HYWKMCKAYRKSDFDHHYGILARRIPDSACTLTTVGLNRWSRHHADHVRYAYLTSNSA
                     ESMNALSVHARKLPITMLLEFFRASVQQWFWEHRNTADGLTTPVTPYAERKLGKRNRK
                     SISWTVKPISQVKFEVLDMKKGGKVNLQDKTCTCKQWQFSGIPCGHVMAVARYFVLRN
                     VTTHVQKYFHTETYKLAYMEDINPLDHISEWIDPGHLQTVLPPLVTKRQSGRPKSTAR
                     IPSQGEDKDNFKSKRKCSLCLEYGHTRSTCTAHYDLSEGKQKSKCNSKTKAKPKGLVK
                     GKGKGKREDSC"
     misc_feature    568..648
                     /gene="LOC139841985"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgatttttt gggcacctgc aatagctgct gccatatcaa acgtatttcc agaagtattt
       61 catgcactat gtgctagaca tttgttggga aacctcaaaa gtgtgtctaa aagggttaaa
      121 agttacgagt ggcactactg gaaaatgtgc aaagcgtata gaaaatctga ttttgatcac
      181 cactatggta tactagcacg acgtatccca gacagtgcat gtacactcac tactgttggc
      241 ctcaacagat ggtctagaca tcatgcagat catgttcgtt atgcttacct aacttctaat
      301 agtgcagagt caatgaacgc actgtcagtt catgcgagga aactcccgat tacaatgctt
      361 cttgaattct ttagagcttc agttcaacaa tggttttggg aacaccgaaa cactgctgat
      421 ggtttaacaa cacctgtcac accatatgca gagcgtaagc ttggtaaaag aaatcgtaag
      481 tctattagtt ggactgtcaa accgatatca caagttaagt ttgaggtatt ggatatgaaa
      541 aaaggcggta aagtcaatct acaagataaa acctgcacat gtaaacaatg gcagttttcc
      601 ggtataccct gtggacatgt aatggcagta gcaaggtatt ttgtcctacg taacgttact
      661 acacacgttc agaagtattt ccacactgaa acgtacaagt tggcatacat ggaagatatt
      721 aacccgctag atcatatttc tgaatggata gatccaggac acctacaaac cgtcctaccg
      781 ccattggtta caaagcgaca atcgggtaga ccgaagagta ctgctcgtat accgtcccaa
      841 ggagaggaca aagacaattt caaatctaaa agaaaatgca gtctttgctt ggaatatgga
      901 catactagat caacttgcac cgcacattat gatctttctg aaggtaaaca aaagtccaag
      961 tgtaactcaa aaacaaaggc aaagccgaag gggttggtaa agggcaaggg taaaggaaaa
     1021 cgtgaagact catgctaa
//
LOCUS       XM_071832168            3072 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841987), mRNA.
ACCESSION   XM_071832168
VERSION     XM_071832168.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3072
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3072
                     /gene="LOC139841987"
                     /note="uncharacterized LOC139841987; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841987"
     CDS             1..3072
                     /gene="LOC139841987"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688269.1"
                     /db_xref="GeneID:139841987"
                     /translation="MDSSWLYFTRESETYEKGLDEYLDYMFKTEAMNGQISCPCKDCR
                     DMLWVERDNAKMHLICVGFMKGYRFPAAITKQFDSPIIDAEDDMSGLVQGAFHWFSYD
                     EEQNENLSIPNINAEQFYNVLRDSKKELYPGCKKFSVLSFIIRLYHSKCVGKCNDKGF
                     NMILDTVREAFPDATIPKSLYEVRKIIRDLGLGYEKIDACENDCMLYWKENKDKIKCD
                     VCNKSRYKESRQGNEDDQSNTADDNGQKIGAKVLRYFPLIPRLQRLFMSPKTAVTMRW
                     HEEGRTKDGFLRHPADSPTWKTLDSINLAFAKDVRNVRLGLASDGFNPFGNKNLSHNV
                     YMRPLVDELKELWDTGVMTYDSSTKTNFYMRAGLLWTISDFPAYANLSGWSTKGQLSC
                     PCCHKYTISQWLTFGKIFCFMGHTDLEIPLRYLTGAEVLEELNGCVFKFGKLVKDNPD
                     LPYNWKKWSIFFELPYWEKNLIRHNLDVMHTEKNVCDNVVGTLMNIDGKTKDHLKARR
                     DLKAMGIRKELHPQNLPNDKVYLPPTCYSLSKNEKERFYEVLKGVKVPDGYASNISRC
                     IQLKPLKMSNLKSHDNHTLMQQLLPVAIRDVLPKHVHSVVMKLCRYYRQLCSKVLNPN
                     DLVQMEHDIIKILRDLERIFPPSFFDVMVHLSVHLASEAKLGGPVQYCWMYPVESKPE
                     GSIAEGYLADVCLSFCSLYLSSDVKTIHNKKGQNYQVDGNEDEDVLPIFSMSGHHIGA
                     SHMETVDQDNLAIAHSCVLFNCSEIEFLRTEHLAVTRTRQGKRKRREREIQQLHSDNF
                     ASWFHEQALHAIGDNRITADIRKLVSGPDEMVKKYNGYVINGYRFNNKHLEKNRRTQN
                     SGVMLAAITNSFASARDNNPIMGYVTYYGVINYIVELQYAVERSVVLFHCDWIPSGSS
                     IKFNENGYTTVNFDRLRTPKEPFILASQAQQVFYVADCVHKGLKVVIKVTHRDFFNMD
                     EQTCIEDVDEHLQSDIPMGPQVDEILNIDLVRTYMEGTVIENTEVDVEVES"
     misc_feature    10..207
                     /gene="LOC139841987"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    850..1305
                     /gene="LOC139841987"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1846..2139
                     /gene="LOC139841987"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2671..2880
                     /gene="LOC139841987"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atggactcga gttggttgta tttcacaaga gaatctgaaa cgtacgaaaa aggactagat
       61 gaatatcttg attatatgtt taaaacagaa gccatgaatg gtcagatatc atgtccttgc
      121 aaagactgtc gggacatgtt atgggttgag cgggataatg ctaaaatgca tctaatatgt
      181 gttgggttta tgaaagggta tagatttcca gctgctatta ccaaacaatt tgatagtcct
      241 attattgatg ccgaagatga tatgagtgga ttggttcaag gcgccttcca ctggtttagt
      301 tatgacgaag aacaaaatga aaatctaagt ataccaaaca taaatgctga acagttttat
      361 aatgtattga gagattcaaa gaaagaactt tatcctggat gtaaaaaatt cagtgtactc
      421 tcttttataa tcagactata ccattctaag tgtgttggta agtgtaatga caaaggattc
      481 aatatgattc ttgatacagt gagggaagcc ttccctgatg ctaccatacc aaagtctttg
      541 tatgaagtaa ggaagataat aagagacttg gggcttggtt atgagaaaat tgatgcatgt
      601 gaaaacgatt gtatgttgta ttggaaagaa aataaggata aaataaaatg tgacgtatgt
      661 aacaagtcaa gatataaaga aagtagacaa ggtaatgaag atgatcagtc caacacagca
      721 gatgataatg gtcagaagat tggggcaaaa gttttacgtt attttccgct cataccccga
      781 ctgcaaagat tgtttatgtc acctaaaacg gcagtcacca tgagatggca tgaagagggt
      841 cgtacgaaag acggtttttt gaggcatcca gctgactcac ctacttggaa aacattagat
      901 tccattaacc ttgcatttgc taaagatgtt cgtaatgtta ggttaggttt agcaagtgat
      961 gggtttaacc cttttggaaa taagaatctt tcgcataatg tctatatgag accattagtg
     1021 gatgagctta aggagttgtg ggatactgga gtaatgacct atgactcatc aacaaagact
     1081 aatttctata tgcgtgctgg tttgttatgg acgataagtg actttcctgc atatgcgaac
     1141 ctatcaggat ggagcactaa aggtcaactt tcatgtcctt gttgtcataa atataccata
     1201 tcacaatggt taacttttgg caaaatattt tgcttcatgg gacatactga cctagaaata
     1261 ccactacgtt atttaacggg ggcagaagtc cttgaagagc taaatggttg tgtgttcaaa
     1321 tttggaaaac ttgttaagga taatccagat ctaccatata actggaagaa gtggagtatc
     1381 ttttttgagt taccttactg ggaaaaaaac ttgatacgcc ataatttaga tgtaatgcat
     1441 actgagaaga atgtatgtga caatgtcgta ggaactttaa tgaatataga tggaaaaacc
     1501 aaagatcatt taaaagcacg tcgtgattta aaagcaatgg gtattagaaa ggaacttcat
     1561 cctcaaaatt taccaaacga caaagtgtat ttgccaccta cttgttactc attatctaaa
     1621 aatgaaaaag aaagatttta tgaggttctt aagggtgtga aagttcccga tggttatgca
     1681 tctaatatat ctcgatgtat tcagctaaaa cctcttaaaa tgtctaacct taaaagtcat
     1741 gataatcata ctttaatgca acagttgctt ccagtggcca tacgagatgt tttacctaag
     1801 catgtccatt ctgttgtgat gaagctttgt cggtactata gacagctatg ctcaaaagtt
     1861 ctaaatccaa atgatttggt tcaaatggaa catgatatta taaaaatcct tcgtgattta
     1921 gaaaggattt ttccaccatc attctttgac gtaatggttc atctttcggt tcaccttgct
     1981 tcagaggcca aattaggagg accagttcaa tattgttgga tgtatccagt tgagagtaaa
     2041 cccgagggtt caattgcaga agggtattta gctgatgtgt gtttgtcttt ttgctcactg
     2101 tacctatcga gtgatgtcaa aactatacat aataagaaag gtcaaaatta tcaggttgat
     2161 ggtaatgaag atgaagatgt tttacctatc tttagtatgt caggtcacca cattggtgct
     2221 tcacacatgg aaacagttga ccaagacaat ttggctatag cacattcttg tgtattgttc
     2281 aattgcagtg aaattgaatt cttaagaaca gaacatctgg cagttactcg cactcgtcag
     2341 ggtaaacgaa aaagacgtga gcgtgagata caacaattgc atagtgataa ttttgcatct
     2401 tggtttcatg aacaagctct acatgctata ggggataata gaatcactgc agatataagg
     2461 aaattggtaa gtggtccaga tgagatggtg aagaaatata acggatatgt cataaatggt
     2521 tatcggttta ataacaaaca tctagaaaag aataggagaa cacaaaatag tggagtcatg
     2581 cttgcggcca ttacaaatag cttcgctagt gctagagata acaatcctat catgggatat
     2641 gtaacatact acggtgtcat aaattatata gttgagttgc agtatgcggt tgaaaggtca
     2701 gttgtgttgt tccattgtga ttggatcccg agtggatcaa gtataaaatt taatgagaat
     2761 gggtatacga cagtcaattt tgaccgtttg aggactccta aagagccatt tatcctagct
     2821 tctcaagcac aacaagtatt ttatgttgca gattgtgttc acaaaggatt gaaagttgtg
     2881 atcaaggtga cacatagaga ttttttcaac atggatgaac aaacgtgtat cgaagatgta
     2941 gatgaacatt tacagagtga catacctatg ggccctcaag ttgatgaaat tttaaatatt
     3001 gatttagtca gaacatatat ggaagggact gttattgaaa atacagaagt agatgttgaa
     3061 gttgagtcat ga
//
LOCUS       XM_071832169            1063 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841988), partial mRNA.
ACCESSION   XM_071832169
VERSION     XM_071832169.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..1063
                     /gene="LOC139841988"
                     /note="uncharacterized LOC139841988; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841988"
     CDS             <1..744
                     /gene="LOC139841988"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688270.1"
                     /db_xref="GeneID:139841988"
                     /translation="FQLANSLTGDCFFPAGTRTSPTTDISRYRVSASIKSTICAVTPS
                     EGTVSVINFEDFVEKDWSFLDVDDINSDEVYKQNTDRIISAGKIGEGSNILISTGSEG
                     FVDLVVDTCSYKQLLVVHDSIFVLACIKEKYDKVKCWQGELVFVPEKWAPFDVVFLYF
                     VPALPFKLVEIFGALSKVCSPGARIVISHPKGREMLKKQKAEYPDVVVSDLPDKSALE
                     SVASDHSFTLSDFIDEPGFYCAVLSYTKY"
     polyA_site      1063
                     /gene="LOC139841988"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttcaactag ctaactcact caccggcgac tgcttctttc cggcggggac acgcacctct
       61 ccgaccacag atatttctag atatagagtt tctgcttcga ttaaatcaac tatttgtgct
      121 gtgacaccaa gtgagggaac agtttccgtt atcaattttg aagattttgt agaaaaagat
      181 tggtcatttc ttgatgtaga tgatataaat tccgatgaag tttacaaaca aaacaccgat
      241 cgtataattt ctgcagggaa aattggggag ggttcgaata ttcttatttc gacgggatct
      301 gaagggtttg tcgatctagt ggttgataca tgttcttata aacagttgct tgttgttcat
      361 gactcgatat tcgtgttagc ttgcattaaa gaaaagtatg acaaggttaa atgttggcaa
      421 ggggaattgg tttttgtgcc tgaaaaatgg gcgccttttg atgtcgtgtt tttatatttt
      481 gttccagctt tgccgtttaa gcttgttgaa atctttggtg cactatcaaa ggtctgctca
      541 ccaggtgcaa gaattgtgat aagtcatcca aaaggaagag aaatgcttaa gaagcaaaaa
      601 gcagagtacc ctgatgttgt agtatccgac ttacctgata aatcggcatt agagagtgtt
      661 gcatctgacc actcgtttac cctatctgac ttcatcgatg aaccaggttt ttactgtgct
      721 gtattatcat atacaaagta ttaggtgatt cactctgaag ttatggctgt gtaagctttc
      781 tgtccatgat ttttttgaca tcctaaagtt tgaccaaaat tttggagtaa gaacagattg
      841 tggatgtgat gctaaatgtg ttaatcatta gagatattaa atactcgctt caatagactc
      901 agacagcaag actatagatt tgacgaatct tagtacaaat taggcggttt caacgccaag
      961 actttgcgaa tttaatagtt tttgtcaata ttgctcgaca tatttaacag attgaatcgt
     1021 tttatttatt agggtcaata aaaacatggt ttgttattgg tga
//
LOCUS       XM_071832170             864 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841989), mRNA.
ACCESSION   XM_071832170
VERSION     XM_071832170.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..864
                     /gene="LOC139841989"
                     /note="uncharacterized LOC139841989; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841989"
     CDS             1..864
                     /gene="LOC139841989"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688271.1"
                     /db_xref="GeneID:139841989"
                     /translation="MQWRFKTETNALWVNVIRSLYGVDGGLVLENGNRHPSTSGTWSS
                     IISASRDIDSFQVDFSNSFTKIVGDGSLTAFWSDRLLGEDKLRNVFPRLYSLEEDKEV
                     LIKDRVIMTENNKQSWNWRREPFGRAAGDLENLNNLLPNFSFDCKNIDRWSWSLSSNG
                     HFTVRTLSILIDDNLLNSYTSQNNTLRNNLVPKKIEIFVWRALKKRIPVLMELDKRGI
                     DLHSVRCPLCDDDLETVDHSLIFCKHVIDVWERVYKWWNMNSFHNFSINEICGPSISN
                     ANHMTKFGKKI"
     misc_feature    <562..726
                     /gene="LOC139841989"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcaatgga ggtttaaaac cgaaaccaac gccctatggg ttaatgtcat tcgaagtctc
       61 tacggtgttg acgggggcct agtgttggaa aatggcaatc gtcatccttc cacttctggg
      121 acctggtcca gcatcatatc tgcaagtcgt gacattgatt cgtttcaggt tgatttcagc
      181 aattcgttta caaagattgt tggtgatggt tcgttgacag cattctggag tgacagattg
      241 ttaggagagg acaaattacg caatgttttc cctcgtctat acagcttaga agaagacaag
      301 gaggtgctga ttaaggatcg agttattatg acagaaaaca acaaacaaag ttggaattgg
      361 aggcgagaac ctttcggtcg agctgcaggc gatctcgaga atcttaataa tcttttacca
      421 aacttttcct ttgattgcaa gaacattgat cgttggagtt ggtctttaag ctcgaatggt
      481 cacttcactg ttaggacttt atcgatatta attgatgata acctacttaa ttcgtatact
      541 tctcagaaca acacacttag gaacaatttg gttcccaaaa aaatagaaat ttttgtatgg
      601 cgagcattga aaaaaagaat acccgtgttg atggagcttg acaaaagagg aattgatctt
      661 catagtgttc ggtgccctct ttgtgacgac gacttggaga ccgtggatca ctctctcatt
      721 ttttgcaaac atgtcattga cgtttgggag cgagtgtaca aatggtggaa catgaactcc
      781 tttcataatt ttagtatcaa cgagatttgt ggaccctcca tctccaatgc aaatcacatg
      841 acgaaattcg gaaagaagat atga
//
LOCUS       XM_071832171             990 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serine/threonine-protein
            phosphatase 7 long form homolog (LOC139841990), mRNA.
ACCESSION   XM_071832171
VERSION     XM_071832171.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..990
                     /gene="LOC139841990"
                     /note="serine/threonine-protein phosphatase 7 long form
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139841990"
     CDS             1..990
                     /gene="LOC139841990"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /protein_id="XP_071688272.1"
                     /db_xref="GeneID:139841990"
                     /translation="MLIYVGEATVTLQDVQVVWGLPIEGEVVSGIWYETNDTNWIPLV
                     VTYLGIAPQDIAALAQNVGDTIESHQQRARVYILALMGGVLFSDSNAYDVPLSFLHTI
                     IDLSPDRRISWGSAVLAHLYRNLCKAATNDQAKAINENLALHEIPPIRAPYGSRWHGK
                     RTNKSTPAHVLPAYRSVLAALTPRQFIWQPYDAVLLSRLPRQCTADRALWSYRGAIIF
                     WATIETHLPDRVCRAIAPHITYIGQWNDRANRVFVGRDGGSVSRDYFDWYKARTVFHI
                     TDLGIDEGTNTYPNWAGTTNVYEEGLWRMQDMAFAQMQPNSQPNPQPFFDMPH"
     misc_feature    13..807
                     /gene="LOC139841990"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 atgttaatat atgtaggaga agcaactgta acattgcaag acgttcaggt tgtatggggt
       61 ttaccgatag aaggagaggt tgtatctggt atttggtatg aaacgaatga tacgaattgg
      121 ataccgttag tcgttaccta cttagggatc gcccctcaag atattgcggc gttggcacaa
      181 aatgttggag acactatcga atctcaccaa cagcgggcta gagtatacat tttagctctg
      241 atgggcggcg ttctattttc tgattctaat gcgtacgatg tccctttgag tttcttgcat
      301 accatcattg acttgagtcc agatagacgt ataagttggg gtagtgcggt tctcgcacat
      361 ctttatagaa atttgtgtaa agcggccaca aacgatcaag ccaaggccat taatgagaac
      421 ctggcattgc acgagattcc accgattcgt gccccctatg gttcgaggtg gcatggtaaa
      481 cggacaaaca aaagtacgcc agcacatgta ttgcctgcgt atcgctccgt acttgcggcg
      541 ttaacgccta gacagtttat atggcaacca tatgatgctg tgttactgag ccgactaccc
      601 cgtcagtgca cagctgacag agccttatgg tcataccgtg gcgcgattat attctgggct
      661 actattgaga cacatctacc agatcgggtc tgcagggcta ttgccccgca catcacgtac
      721 atcggacaat ggaatgaccg agccaaccgt gtatttgttg gtagggatgg tgggagtgtg
      781 agtagggatt actttgactg gtacaaggct cgcacagttt ttcacattac agatctcgga
      841 atcgatgagg gcaccaacac atatcctaat tgggcaggga ctactaatgt atatgaggaa
      901 gggctttgga ggatgcaaga tatggcattt gcacaaatgc aaccaaacag tcaacctaac
      961 ccgcaaccat tttttgacat gccacattag
//
LOCUS       XM_071832172             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841991), mRNA.
ACCESSION   XM_071832172
VERSION     XM_071832172.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139841991"
                     /note="uncharacterized LOC139841991; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139841991"
     CDS             1..795
                     /gene="LOC139841991"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688273.1"
                     /db_xref="GeneID:139841991"
                     /translation="MSKWSMPVACHTFSYMLKGDARVWFDSLLKDSVSSFDDLKQQFR
                     SKFSQQKRHKKNHVAAHSIRQRDNEGTRAFLIRYTNETQQIPDLPESQRISGLLYGSK
                     VRHLIEHLSRNLPSTYEALLNKAYIWLDEKETTWTFVQDEPPIHKRNESIDRRGEKNG
                     RRENKNKFGPYRRDSGAGILGTLIKCLKDILAKEKEANHFKAPGRLSSKGKPRDMSRF
                     YDFHNDYGHETDECFNFKIANEEAVRFGKLSHLIKGIQNPNKEKDR"
     misc_feature    37..273
                     /gene="LOC139841991"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atgtcaaaat ggagcatgcc ggtggcatgc catacttttt cctatatgtt gaaaggtgac
       61 gctagggttt ggtttgattc tcttctcaaa gactcagtct ctagtttcga tgatctcaaa
      121 caacaattta gatctaagtt cagtcaacag aaacggcaca agaaaaacca tgtggccgcc
      181 catagcataa gacaaagaga taacgaaggc actagagcct ttctcatcag atacaccaat
      241 gagacccagc agatcccgga cttgccagaa tctcagagaa tatcggggtt attatacggg
      301 tcaaaggttc gtcacctcat cgaacacctt agcagaaacc tcccctccac gtatgaagcc
      361 ttgttaaaca aagcctacat atggttagat gaaaaggaaa cgacatggac ttttgtccaa
      421 gatgaaccac ccatacacaa aaggaatgaa agtatagatc gaagagggga aaagaatgga
      481 agaagggaga ataagaataa gttcgggcca taccgaagag attccggagc tggaatattg
      541 gggacactta taaaatgcct aaaagacatt ctagctaaag agaaagaggc caaccatttc
      601 aaagctccag gaagattgtc aagcaaagga aaaccaagag acatgagcag gttctacgac
      661 ttccacaatg attacggtca tgaaacagac gaatgcttta atttcaaaat agcaaatgaa
      721 gaagcagttc gattcggaaa actgtcccac ctcatcaagg ggatacaaaa cccgaataag
      781 gaaaaagata gatga
//
LOCUS       XM_071832173             741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841992), mRNA.
ACCESSION   XM_071832173
VERSION     XM_071832173.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..741
                     /gene="LOC139841992"
                     /note="uncharacterized LOC139841992; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841992"
     CDS             1..741
                     /gene="LOC139841992"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688274.1"
                     /db_xref="GeneID:139841992"
                     /translation="MEVEDLLNSQSESEESVTNSDSAESDSDEDLIQDGHNALNYLDL
                     LDAMDQEDEARNSRTIFRRRRLQRDRIDTGNRLYRDYFSDNPTFPGDYFRNRYRMSKS
                     LFNRIGHAILSYDAQPRPDYFKYFDQRFDATGQLGFSIFQKCTSAIRQLAYGIAPDAF
                     DEYLHMGASTSRDCLNNYCKCIIHMFSREYLMKPTEEDVRRLHAKHLGMHAFPGMLGS
                     LDCMHWAWKNCPVAWQGHYHRVIMKDQQ"
     misc_feature    565..>717
                     /gene="LOC139841992"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggaagtgg aagatttatt aaattctcag agtgaaagcg aggagagcgt gacaaatagt
       61 gatagcgcag agtccgattc cgatgaagat ttaattcaag acggtcacaa cgcgcttaac
      121 tatctcgatt tgcttgatgc aatggaccaa gaagatgaag ctcgaaattc tcgtacaatt
      181 tttagaagac gtcggttaca aagagatcgg attgataccg gtaatcgttt gtacagagac
      241 tatttctcgg ataatccaac atttccgggt gattattttc gaaatcgata ccgaatgagt
      301 aagtcattgt ttaatcgtat tggtcatgct attctatcat atgatgctca accgagaccc
      361 gattatttta aatattttga tcaacgtttt gatgcaaccg gtcaactcgg tttcagtatt
      421 tttcaaaagt gtacatcggc gatacgtcaa ttggcgtatg gcattgcgcc tgatgcattc
      481 gatgaatatt tacacatggg cgcatctacg tctcgtgact gtttaaacaa ttattgtaaa
      541 tgtattattc atatgttttc gcgagaatat ttaatgaaac caactgaaga agatgttcgt
      601 cgattgcatg ccaaacattt ggggatgcac gcttttccgg ggatgttagg tagtcttgat
      661 tgcatgcact gggcttggaa aaattgtcca gttgcgtggc aagggcatta ccacagggtg
      721 atcatgaagg accaacaata a
//
LOCUS       XM_071832174             585 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dirigent protein 2-like
            (LOC139841993), mRNA.
ACCESSION   XM_071832174
VERSION     XM_071832174.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..585
                     /gene="LOC139841993"
                     /note="dirigent protein 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 34
                     Proteins"
                     /db_xref="GeneID:139841993"
     CDS             1..585
                     /gene="LOC139841993"
                     /codon_start=1
                     /product="dirigent protein 2-like"
                     /protein_id="XP_071688275.1"
                     /db_xref="GeneID:139841993"
                     /translation="MTQIHPKHMYIILAIFLFSLFIEGESNEFATSLPPKSLHLKNEK
                     LTHLHFYWHEIINGDHPTKVTVVKAPPSNTTNFFGAITVLDDALRVGPEENSTIVGRA
                     QGMYAASDNTTYSISMDLSLKFTEGIYNGSTLSIMGRNQISLPMEVPIVGGTGVFRFA
                     RGYTHIKTYKHVPEVFAIIDMNLYVYHYGDSEKY"
     misc_feature    136..558
                     /gene="LOC139841993"
                     /note="Dirigent-like protein; Region: Dirigent; pfam03018"
                     /db_xref="CDD:460780"
ORIGIN      
        1 atgactcaaa ttcacccaaa acatatgtac atcattcttg ccattttctt attctcactt
       61 tttattgaag gagaatctaa cgaattcgca acaagtttgc caccaaaatc gcttcactta
      121 aagaacgaaa agctaacaca ccttcacttc tactggcatg aaataattaa tggtgatcat
      181 ccaaccaagg tgacggtagt aaaagcacct ccaagcaaca caacgaactt cttcggtgct
      241 ataaccgttc ttgatgatgc tttaagagtg ggtccagaag aaaactctac gatcgtgggt
      301 agagctcaag ggatgtatgc ggcttctgac aatacgactt actctatttc gatggatctc
      361 agtttaaagt ttactgaagg gatatataat ggtagtactt tgagcattat ggggaggaac
      421 caaatctcgt taccaatgga agtgccgatt gtgggtggga ccggggtttt tcggtttgca
      481 cgaggttata cacatataaa aacatataag cacgttccag aagtctttgc gattattgat
      541 atgaatttat atgtttatca ttatggagac tctgaaaaat actag
//
LOCUS       XM_071832175             675 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841994), mRNA.
ACCESSION   XM_071832175
VERSION     XM_071832175.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..675
                     /gene="LOC139841994"
                     /note="uncharacterized LOC139841994; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139841994"
     CDS             1..675
                     /gene="LOC139841994"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688276.1"
                     /db_xref="GeneID:139841994"
                     /translation="MSSASSSSEEFFMQVLDIINSEALESENEAESSNTRRYIEREHE
                     TAHPTTNDIKRLNEAHEDLYSLPGMMGSIDCMHWAWGKCPVAWKGQFTRGAHKVSTIK
                     LESVASYNNWIWHAFFGVAGSNNDLNVLNASNLFNSMLNEEIEDIPFTVNGVEYKRGY
                     YLADSIYPGWASFVKAFSSANDEKRKYFSKKEEAASKDVERTFGILQRRWHILQQPSR
                     TEASML"
     misc_feature    142..654
                     /gene="LOC139841994"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcttcag catcatcgtc tagcgaagag ttttttatgc aagtgctcga tataatcaat
       61 agcgaggcgt tagaaagtga aaatgaagcg gaaagttcaa acacacgtcg ttatatagaa
      121 cgtgaacatg aaaccgcaca tcctaccaca aatgatatca aacgattgaa tgaagctcac
      181 gaagatcttt acagtttacc tggaatgatg ggaagcatag attgtatgca ttgggcatgg
      241 ggaaaatgtc ccgttgcatg gaaaggtcaa tttactcgag gagctcacaa agtttcaact
      301 attaagctag aatctgtagc ctcttataat aactggattt ggcatgcttt ctttggggtt
      361 gcgggttcaa acaacgactt aaacgtcttg aacgctagta atctcttcaa ctcaatgctt
      421 aatgaagaaa tagaagacat tccttttact gtaaatggag ttgagtacaa aagaggatat
      481 tatctagcgg atagtatata tcccgggtgg gcatcatttg ttaaggcgtt ttcaagtgca
      541 aatgacgaaa aacgtaagta cttttcgaag aaagaagaag cagcaagcaa ggatgttgag
      601 aggacttttg gtattttaca aaggcgttgg catatactac aacaaccatc aaggacagaa
      661 gcatcaatgt tatga
//
LOCUS       XM_071832176             621 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841995), mRNA.
ACCESSION   XM_071832176
VERSION     XM_071832176.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..621
                     /gene="LOC139841995"
                     /note="uncharacterized LOC139841995; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139841995"
     CDS             1..621
                     /gene="LOC139841995"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688277.1"
                     /db_xref="GeneID:139841995"
                     /translation="MGMLGSIDCMHWEWRNCPVALKGQYTRGDHKKPTLMLEVVASYD
                     LWIWHAFFGMAGSNNDINVLNQSPIFDKLKNGTFPSAPFEVNGHEYSKRYYLADGIYP
                     DWATLVKGYSCPTEEPTIKFTGFQASARKDVERAFGVLQGRFHIIPLASRSMSVNRMR
                     RVMECGLILHNMILEDNGFALSKWEERFTTEVMENCMERIRNRGRD"
     misc_feature    4..534
                     /gene="LOC139841995"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgggtatgc tcggtagtat agattgtatg cactgggagt ggaggaattg tcctgttgct
       61 ttaaaaggac aatacactag gggtgatcac aagaaaccga cccttatgct tgaagttgtt
      121 gcttcttatg acttgtggat ttggcatgct ttttttggga tggcgggttc caacaatgat
      181 atcaacgttt tgaaccaatc acctatattt gataaactta agaacggaac atttccatct
      241 gcaccatttg aggtaaatgg gcatgaatat agcaaaagat attaccttgc ggatggtata
      301 tatcccgatt gggcaacttt agttaaagga tattcatgtc ctactgaaga accaacgatt
      361 aagtttacag gatttcaagc tagtgcccga aaggatgtag agagggcatt tggggttctt
      421 caaggccgtt ttcatattat acccctagct tcacgaagta tgagcgttaa caggatgcga
      481 agagtgatgg aatgtggtct catattacat aacatgatac ttgaagataa cggctttgca
      541 ctttctaaat gggaagaaag atttactacc gaagtaatgg aaaattgtat ggaacgtata
      601 cgaaacagag gacgggattg a
//
LOCUS       XM_071832177             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dirigent protein 1-like
            (LOC139841997), mRNA.
ACCESSION   XM_071832177
VERSION     XM_071832177.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139841997"
                     /note="dirigent protein 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 35
                     Proteins"
                     /db_xref="GeneID:139841997"
     CDS             1..591
                     /gene="LOC139841997"
                     /codon_start=1
                     /product="dirigent protein 1-like"
                     /protein_id="XP_071688278.1"
                     /db_xref="GeneID:139841997"
                     /translation="MAQILPKHMYIILTIFAFSLFIEGESTEFATSLPPKSLHLKHEK
                     LTHLHFYWHEIITGANQTKVTVAQAPPSNTTKIFFGAISVLDDALRVGHGENSTIVGR
                     AQGMYAASDDTTYSILMALTFKFTEGIYNGSTLSILGRNQISLPVREVPIVGGTGVFR
                     FARGYTNIKTYKFISEVIAIMEMNLYVYHYGDSEKY"
     misc_feature    136..564
                     /gene="LOC139841997"
                     /note="Dirigent-like protein; Region: Dirigent; pfam03018"
                     /db_xref="CDD:460780"
ORIGIN      
        1 atggctcaaa ttctcccaaa acatatgtac atcattctta ccatttttgc attctcactt
       61 tttatcgaag gagaatctac cgaatttgca acaagtttgc caccaaaatc gcttcactta
      121 aagcacgaga agctaacaca ccttcacttc tactggcatg aaataattac tggtgctaat
      181 caaaccaagg tgactgtagc acaagcaccc ccaagcaaca caacgaaaat cttcttcggt
      241 gctataagcg ttcttgacga tgctttaaga gtgggtcacg gagagaactc tacgatcgtg
      301 ggaagagctc aagggatgta tgcggcttct gacgatacaa cttactcgat tttgatggct
      361 ctcactttca agtttactga agggatatat aatggtagta ctttgagcat attggggagg
      421 aaccaaatct cgttaccagt tagagaagtg ccgattgtgg gtgggaccgg ggtttttcga
      481 tttgcacgag gttatacaaa cattaaaaca tataagttca tttcggaagt cattgcgatt
      541 atggaaatga atctatatgt ttatcattat ggagactctg aaaaatacta g
//
LOCUS       XM_071832178             513 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841998), mRNA.
ACCESSION   XM_071832178
VERSION     XM_071832178.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..513
                     /gene="LOC139841998"
                     /note="uncharacterized LOC139841998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139841998"
     CDS             1..513
                     /gene="LOC139841998"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688279.1"
                     /db_xref="GeneID:139841998"
                     /translation="MDIQQSFTSVAYPQANGQVEVTNRDIVACIKARLGKHRQGCVDE
                     LQHVLWAHRTTPKDSTNETPFSLVYGTEAVIPAEVLVPTNRITTFGEQQNDEALRENL
                     DALEEQRMIAHISNKASRQQDVGKLGPRWKGPYRVVSITEYGAYHLETPDGVPIQRPW
                     HAFHLKKYHV"
ORIGIN      
        1 atggatattc aacagtcatt tacttctgtg gcctacccac aggccaacgg gcaagtcgag
       61 gtaactaaca gagacatcgt tgcctgcata aaagcaaggc taggcaaaca ccgacaggga
      121 tgtgtggatg aactccaaca cgtactatgg gcacaccgga caacaccgaa agacagtaca
      181 aatgagacac cttttagtct agtctacggc accgaagcgg tcatcccggc cgaggtgctt
      241 gtcccaacca accgaataac aacattcggt gaacaacaaa atgatgaagc actacgagaa
      301 aacttggacg ctctggaaga acaacgaatg atagcacata tcagcaacaa ggccagccgg
      361 cagcaagatg tcggaaaatt aggaccaaga tggaaaggac cttacagggt tgtcagcata
      421 actgagtatg gtgcatacca cctggagaca ccagacggag ttccgataca acgcccttgg
      481 cacgcctttc atttgaaaaa atatcatgtg taa
//
LOCUS       XM_071832181             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139841999), mRNA.
ACCESSION   XM_071832181
VERSION     XM_071832181.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139841999"
                     /note="uncharacterized LOC139841999; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139841999"
     CDS             1..525
                     /gene="LOC139841999"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688282.1"
                     /db_xref="GeneID:139841999"
                     /translation="MDTESSMEALMKAGQVGLGHAITQPIIKENFDIKGPIFHLLKDN
                     QFRGTEKEDANAHIRNFKDICHLFNISNVESNVIYLHFFPWSLKDEAKEWLNSLPEGD
                     ITSWDTMVRFGQLLRGCPQHGLDKFKKATTFYKGCDIATRRDIDTSAGGNIMSKTAEE
                     AEMLINKLISCSFP"
     misc_feature    241..408
                     /gene="LOC139841999"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atggataccg aaagttcaat ggaagcgtta atgaaagcgg gtcaagtagg attaggtcac
       61 gccattactc agccaattat aaaagaaaat tttgacatta agggtcccat ctttcacttg
      121 cttaaggata atcaatttag gggtactgaa aaagaagatg ctaatgctca cattcgaaac
      181 ttcaaggata tttgccatct gtttaatata tctaatgttg aaagtaatgt aatttatctt
      241 cacttctttc catggtcgtt aaaagacgaa gctaaagagt ggttaaactc attgcccgaa
      301 ggagatataa ctagttggga tactatggtt agatttggtc aattgcttag gggttgtcca
      361 caacatggtt tggataagtt taaaaaggca actactttct acaagggttg tgatatagct
      421 acaagaagag atattgatac atctgctgga ggaaatatca tgagtaaaac tgccgaagaa
      481 gctgaaatgt taattaataa gttaattagc tgctcattcc catga
//
LOCUS       XM_071832182             477 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842000), mRNA.
ACCESSION   XM_071832182
VERSION     XM_071832182.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..477
                     /gene="LOC139842000"
                     /note="uncharacterized LOC139842000; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842000"
     CDS             1..477
                     /gene="LOC139842000"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688283.1"
                     /db_xref="GeneID:139842000"
                     /translation="MRSDPGEFQIPCLIHGPIPVIGLADTGSSINVMPFSIYNRLGLP
                     SLEPIQGSVCFADSLLHKPLGIAKQVKVIIGYAFYRIDFVVMDMKEDPITPLILGSPF
                     LVTARATINYVDNSLTIRYGAIFESISLVPRSKVPCSNVKMVKVDKKMMMSLPLIK"
     misc_feature    28..312
                     /gene="LOC139842000"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(73..75,79..81,85..87,157..165,289..291)
                     /gene="LOC139842000"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    73..81
                     /gene="LOC139842000"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    73..75
                     /gene="LOC139842000"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(157..168,178..189)
                     /gene="LOC139842000"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcgttctg atccagggga attccaaatt ccttgcttaa ttcatggtcc aattcctgtt
       61 attggattag ctgatactgg ttctagcatt aatgttatgc cattttccat ttataatcgt
      121 ttagggttac catcgttaga acctattcaa gggagtgttt gttttgctga tagtctctta
      181 cataaaccat tggggattgc taaacaagtt aaagttatta ttggttatgc tttttataga
      241 attgatttcg tggttatgga tatgaaagaa gacccgataa ctcctttaat cctaggatct
      301 ccgtttctag ttactgctcg tgctaccatt aattatgttg ataattcatt aactattcgt
      361 tatggtgcca tttttgaatc tatttcgtta gttccaaggt ctaaagttcc ttgttcaaat
      421 gtgaaaatgg ttaaagttga taaaaagatg atgatgagct taccgttgat aaaatag
//
LOCUS       XM_071832183             930 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842001), mRNA.
ACCESSION   XM_071832183
VERSION     XM_071832183.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..930
                     /gene="LOC139842001"
                     /note="uncharacterized LOC139842001; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842001"
     CDS             1..930
                     /gene="LOC139842001"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688284.1"
                     /db_xref="GeneID:139842001"
                     /translation="MQKYLKLVQELAVDFDLFQITHVSRTLVALTFSHFKKEIWVEEV
                     KVKSIDTDGVSAVVEKEEQSWMTSIVEFLNKGALPMDSTEAGKIKMIALMYLLDKGIL
                     YRKYFLGPHLRCLNPTQAESIIREVHEGMYALHSGHKIVASKIMRLRYYWPSMYRDAT
                     ERLVPRAEHKANIHNSCTPQANGQCEVTNRDIVLGIKSRLGLCRMGWIDELPKVLWAH
                     RTTPKGVTNETPFSLVYGSEAVILAEINVPTMRIASFGETSNSEELRGNLNLVEERRE
                     RATIKETINKQRIASYYNKRVKPLSFQLDDLVW"
     misc_feature    343..>474
                     /gene="LOC139842001"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcaaaaat atctgaaact tgtgcaagag cttgcagtag actttgattt attccaaata
       61 actcatgttt caagaacatt agtcgcctta acattcagcc attttaagaa agaaatttgg
      121 gtcgaggaag ttaaagttaa atccattgac acagacggtg tatctgccgt agttgagaaa
      181 gaggagcaga gttggatgac atcgatagtg gaatttctga ataaaggtgc attgccaatg
      241 gattcgacag aagcaggaaa gattaaaatg atagcactga tgtatttgtt agacaaagga
      301 attctataca gaaagtattt cttgggaccc catttgcggt gtcttaatcc aactcaagca
      361 gagtcaatca tacgtgaagt gcacgaggga atgtacgctt tgcactcagg gcataaaata
      421 gtggcgtcca aaataatgcg gctcagatac tattggccgt caatgtacag agatgccaca
      481 gagcgattgg tgccaagagc tgaacataaa gcaaacattc acaacagttg cacaccccaa
      541 gcgaacggtc agtgtgaggt cacaaatcgg gatatcgtgt taggaattaa atcaaggctt
      601 ggattgtgcc gaatgggttg gatagatgaa ctgccgaagg tactgtgggc gcaccgcaca
      661 actccaaaag gcgtgaccaa tgaaacacct ttcagtttgg tgtacgggtc cgaggctgta
      721 atactcgctg aaataaatgt gccaactatg cgcatagctt ccttcggtga aactagcaat
      781 agcgaagaac tgcgtggaaa tctaaactta gttgaagagc gcagggaaag ggcgaccata
      841 aaagaaacaa tcaacaaaca aagaatcgca agctactata ataagcgcgt aaaaccatta
      901 tctttccaat tagatgactt ggtatggtga
//
LOCUS       XM_071832184             924 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842002), mRNA.
ACCESSION   XM_071832184
VERSION     XM_071832184.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..924
                     /gene="LOC139842002"
                     /note="uncharacterized LOC139842002; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842002"
     CDS             1..924
                     /gene="LOC139842002"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688285.1"
                     /db_xref="GeneID:139842002"
                     /translation="MCKAYRKSNFDHHYGILARRIPDSARTLTTVGLNRWSRHHADRV
                     RYAYLTSNSAESMNALSVHARKLPITMLLEFFRASVQQWFWEHRNTADGLTTPVTPYA
                     ERKLGKRNRKSISWTVKPISQVKFEVLDMKKGGKVNLQDKTCTCKQWQFSGIPCGHVM
                     AVARYFVLRNVTTHVQKYFHTETYKSAYMEDINPLDHISEWIDPGHLQTVLPPLVTKR
                     QSGRPKSTARIPSQGEDKDNFKSKRKCSRCLEYGHTRSTYIAHYDLSEGKQKSKCNSK
                     TKAKPKGLVKGKGKGKREDSCSTQFGSTYNF"
     misc_feature    424..504
                     /gene="LOC139842002"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgtgcaaag cgtatagaaa atccaatttt gatcaccact atggtatact agcacgacgt
       61 atcccagaca gtgcacgtac actcactact gttggcctca acagatggtc tagacatcat
      121 gcagatcgtg ttcggtatgc ttacctaact tctaatagtg cagagtcaat gaacgcactg
      181 tcagttcatg cgaggaaact cccgattaca atgcttcttg aattctttag agcttcagtt
      241 caacaatggt tttgggaaca ccgaaacact gctgatggtt taacaacacc tgtcacacca
      301 tatgcagagc gtaagctggg taaaagaaat cgtaagtcta ttagttggac tgtcaaaccg
      361 atatcacaag ttaagtttga ggtattggat atgaaaaagg gcggtaaagt caatctacaa
      421 gataaaactt gcacatgtaa acaatggcag ttttccggta taccatgtgg acatgtaatg
      481 gcagtagcaa ggtattttgt cctacgtaac gttactacac atgttcagaa gtatttccac
      541 actgaaacgt acaagtcggc atacatggaa gatattaacc cgctagatca tatttctgaa
      601 tggatagatc caggacacct acaaaccgtc ctaccgccat tggttacaaa gcgacaatcg
      661 ggtagaccga agagtactgc tcgtataccg tcccaaggag aggacaaaga caatttcaaa
      721 tctaaaagaa aatgcagtcg ttgcttagaa tatggacata ctagatcaac ttacatcgca
      781 cattatgatc tttctgaagg taaacaaaag tccaagtgta actcaaaaac aaaggcaaag
      841 ccgaaggggt tggtaaaggg caagggtaaa ggaaaacgtg aagactcatg ctcaacacaa
      901 tttggctcca cttacaattt ttag
//
LOCUS       XM_071832185             948 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842003), mRNA.
ACCESSION   XM_071832185
VERSION     XM_071832185.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..948
                     /gene="LOC139842003"
                     /note="uncharacterized LOC139842003; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842003"
     CDS             1..948
                     /gene="LOC139842003"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688286.1"
                     /db_xref="GeneID:139842003"
                     /translation="MKIYETSDLVKLNQTFENKEDFLMQLRTKCVTEGFQIKPKYSDK
                     SRYTATCISPNCSWQITARCIQDSNNFQVRKLNDLHTCSNTQILPNNKHATKKVLGNI
                     LKEVMKQEGRVYRPNDIRTDMSARFKISLSYHQAWKAKCYAIEMLRGSLEDSFQILPN
                     YLYNLRLSNPGSVTNIRTDNKGRFVMSYMSIDAATRSFVNYARPVIIVDGAHLKSRYL
                     GTNLIAVAMDANNGILPLAYGIGAGETTDHWTWFFGNLRDSLQSSGCCIVNLTIISDR
                     APAIAAGISNVFPEVFHALCARHLLGNLKSVSKRVKSYK"
     misc_feature    22..219
                     /gene="LOC139842003"
                     /note="MuDR family transposase; Region: DBD_Tnp_Mut;
                     pfam03108"
                     /db_xref="CDD:427142"
     misc_feature    613..909
                     /gene="LOC139842003"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgaaaatat atgaaacctc agatctagtt aaattgaatc agactttcga aaacaaggaa
       61 gattttctta tgcaattacg tacaaagtgt gttactgaag ggtttcagat aaaaccaaag
      121 tactcagaca agtcaaggta tacagctaca tgcatatcac caaattgttc atggcaaatt
      181 actgctaggt gtatacaaga tagcaacaac tttcaagtac ggaagttgaa tgatctacac
      241 acgtgctcaa atacccaaat tcttccgaac aataagcatg ccaccaagaa ggtcctaggg
      301 aatatactga aagaggtgat gaaacaagaa ggtcgtgtct atcgaccgaa tgatataagg
      361 actgatatgt cggcgcgatt taaaataagt ctatcatacc accaagcatg gaaagccaaa
      421 tgttacgcaa ttgagatgtt gaggggtagt cttgaagatt cctttcaaat actacctaat
      481 tatctatata atcttagatt gtctaatcca ggtagtgtaa ccaacattcg aacagacaac
      541 aaaggcagat ttgttatgag ttacatgtcc attgatgcag cgacacgttc gtttgttaac
      601 tatgcacgac cagtaatcat agtcgatggg gctcatttaa aaagtcgtta cttggggact
      661 aacttgattg ctgtcgctat ggatgctaac aatggaatcc ttccattagc ctacggtatt
      721 ggagcaggag agaccaccga tcattggaca tggttttttg gtaatctaag agactctcta
      781 cagtcttcgg ggtgttgtat tgttaatctt accattatat ctgacagggc acctgcaata
      841 gctgctggca tatcaaacgt atttccagaa gtatttcatg cactatgtgc tagacatttg
      901 ttgggaaacc tcaaaagtgt gtctaaaagg gttaaaagtt acaagtga
//
LOCUS       XM_071832186            2304 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842004), mRNA.
ACCESSION   XM_071832186
VERSION     XM_071832186.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2304
                     /gene="LOC139842004"
                     /note="uncharacterized LOC139842004; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842004"
     CDS             1..2304
                     /gene="LOC139842004"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688287.1"
                     /db_xref="GeneID:139842004"
                     /translation="MSYPPSLGAGSFRGVGGGSRVATPGKIRVGGWNVGTLTGKRIEL
                     VDIFLKCKVEIVCVQETRWKGQEAVDINNYRLWYSGSRTARNGVGILLGPTHKDHVVD
                     VGRFSDRIMSVTFIINEETFTVISAYTPHVGLGEAEKNSFWELLDEVERGCPADLRLI
                     IGGDLNGHIGAEVEGYRGAHGGFGYGVRNEEGCSILEFAIAHDLVVANSFFKKRDAQL
                     ATFHSGGHSTQIDFFLLRRGDLRNCKDCKVLLTWTCSSQYRLLVMELGTQGWVNRRAR
                     EVQQPRILWKNLNGEKAETFRANVVERMGAEMENAAFIDADQMWNNLASTIRGVAKES
                     LGVAVGTSRAQNGCRESWWLNDEVQTKVALKQARFRELTSFRGGTLADRTSIENSYKE
                     AKREAKIAVTRAKDKAYEDLYKRIDSKEGANDIYRIAKARERRRRDLVNIKYIKDEAG
                     QSIVKEDKIRKRWEEYLSSLFDGGRTRNGEPHGYDMAPQYQNNCFCTRFNHGEVRVAL
                     RKMGRNKAVGPDQILIEAWRCLGDDGVRWLTNLFNTTFRIAKMPMEWRLSEVIPIYKN
                     KGDAQTCSNYRGIKLLSHTMKLWERVIENRLRCETKVSENQFGFMPGRSSMEGSKTRI
                     RTTVGYTEYFPVEVGLHQGSALSPFLFALVLDDLSQRIQGSIPWCLIFADDIVVVSKS
                     QDELNGMLEQWRNALEQNGLQISRLKSEYLRCDYGRIEDHNDTVDIRIGDQYVCGLTA
                     KVIDRNTKHAIWFDFDDVVDGGEMVNV"
     misc_feature    85..795
                     /gene="LOC139842004"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(97..99,178..180,382..384,490..492,496..498,691..693,
                     769..774)
                     /gene="LOC139842004"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(178..180,769..771)
                     /gene="LOC139842004"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(382..384,496..498,772..774)
                     /gene="LOC139842004"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    1672..2190
                     /gene="LOC139842004"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    1927..1929
                     /gene="LOC139842004"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgtcatatc ctcctagttt aggggcgggt agctttagag gggttggagg agggagtaga
       61 gtagcaactc caggtaagat tagagtggga ggttggaacg taggaacttt gacgggcaag
      121 aggattgagc ttgtggatat ctttcttaag tgtaaggtgg aaatagtgtg cgttcaagag
      181 actagatgga agggacagga ggcggtggac attaataact acaggttgtg gtactcgggc
      241 tctaggacag ctcgaaatgg agtaggaatc cttttaggtc caacacacaa ggatcatgtt
      301 gttgatgtgg gtaggtttag cgataggatt atgtcggtta catttataat taatgaggag
      361 acgttcacgg tcattagcgc ttacacaccc cacgtaggtt taggagaagc ggagaagaac
      421 agtttttggg aattattaga tgaggttgaa aggggatgtc cagcggacct tcgattgatt
      481 atagggggcg atcttaatgg tcatatagga gcggaggtag agggatatag gggagcccat
      541 gggggctttg ggtatggggt tagaaatgaa gaagggtgct caattctcga gttcgccatt
      601 gcccatgatc tggttgttgc aaactctttc ttcaagaaga gggatgctca gctagccacc
      661 ttccatagtg ggggtcatag tacccaaatt gactttttcc ttcttcgcag gggtgacctt
      721 aggaactgta aggactgtaa ggtcctccta acctggactt gttcatccca gtatagactg
      781 ttggtcatgg agttaggtac ccagggatgg gtaaacagga gggcgagaga ggtacaacaa
      841 cccagaatcc tctggaagaa cttaaatgga gagaaggcgg agacttttag agctaatgtt
      901 gttgaaagaa tgggtgctga aatggaaaat gcagccttta ttgatgcaga tcagatgtgg
      961 aacaacctag cgtccactat tagaggggtg gcaaaagaat ccttgggagt ggccgttggg
     1021 acgtcgagag cccaaaatgg ttgtagagaa tcatggtggc ttaacgacga ggtccaaact
     1081 aaagtcgcgc ttaaacaagc gaggtttcga gagctcacct cctttagagg gggtacacta
     1141 gcagacagaa ctagcataga aaatagctat aaagaagcca agagagaagc aaagatcgcc
     1201 gttacacgtg caaaagataa agcttacgaa gacttatata agagaataga ctctaaagaa
     1261 ggggcaaatg acatctacag gatagccaaa gctagggaac gtcggcgaag agatctagtt
     1321 aacatcaaat atatcaagga tgaagcaggt caaagcatag tgaaggaaga caaaattagg
     1381 aaacgatggg aagaatattt atcatccctt ttcgatgggg gaaggactag gaatggagaa
     1441 ccacatggct atgatatggc cccacaatac caaaacaact gcttctgcac gaggttcaac
     1501 catggggaag ttagagtggc cctacgcaag atggggagaa acaaagcagt aggaccggac
     1561 caaatcctca tagaggcgtg gcggtgctta ggcgatgatg gggttaggtg gttgacaaac
     1621 cttttcaaca cgacgtttag aatcgcaaaa atgccaatgg agtggagact gagcgaggtt
     1681 attcccattt acaagaacaa aggggatgcg cagacgtgta gtaactatag aggtataaag
     1741 ttacttagcc ataccatgaa actatgggag agagtgattg agaataggct tagatgcgag
     1801 acaaaggtgt cagagaatca atttgggttc atgccaggac gctcctcgat ggaggggtcg
     1861 aaaactcgca ttcggacgac agtaggatac acagagtatt tcccagtaga agtaggttta
     1921 catcaaggat ctgctcttag cccttttctt ttcgctttag tcttagacga cctgtctcaa
     1981 aggatacaag ggagtatccc ttggtgcttg atttttgccg atgatattgt tgtagtatcg
     2041 aaatcccagg atgagctaaa cggaatgctg gagcaatgga ggaatgccct ggaacaaaat
     2101 ggactgcaga ttagtagact taaatcggag tatcttagat gcgactacgg gaggatcgaa
     2161 gatcacaatg atactgtgga tattcgtatt ggggatcagt atgtgtgtgg tcttacggca
     2221 aaagtaatag ataggaacac aaaacacgca atatggtttg attttgatga tgttgtcgac
     2281 ggtggtgaga tggttaatgt gtag
//
LOCUS       XM_071832187             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842005), mRNA.
ACCESSION   XM_071832187
VERSION     XM_071832187.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139842005"
                     /note="uncharacterized LOC139842005; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842005"
     CDS             1..504
                     /gene="LOC139842005"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688288.1"
                     /db_xref="GeneID:139842005"
                     /translation="MSTLRNNLILKKVEVFVWRVLKGRIPVLVELEKRGVDLHSVRCP
                     NCDNDIESVCHSLLSCERVRDVWNRIFDWWNLPRPPNLNLSSLLGSGQNGSVSHNRVW
                     QAVMWTCAYLVWKYRNEKVFKNKVWNVPVAVCEIQAKSFEWVSRRCEETRIDWNNWLH
                     NPSSIVV"
     misc_feature    <34..198
                     /gene="LOC139842005"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagtacct tgcgtaacaa tctcattctc aaaaaggtgg aggtatttgt ttggagggtt
       61 ttaaaagggc ggatcccggt tctagttgaa ttagagaaaa gaggagtcga tctacattcg
      121 gtacgttgtc caaattgtga caatgatatt gagagtgttt gccattccct tttatcttgc
      181 gaaagagtgc gggacgtttg gaatagaatc tttgattggt ggaacttgcc aaggcctcca
      241 aacttgaatc tatcttctct tcttggttcg ggacaaaatg gttcggtctc tcacaatcga
      301 gtatggcaag cggtaatgtg gacttgtgct tatctagtgt ggaaatatcg taacgaaaaa
      361 gtcttcaaaa ataaagtgtg gaatgttccg gttgcggttt gcgaaataca agcaaagagt
      421 ttcgagtggg tgtcgagaag gtgcgaagag acgcgtatcg attggaataa ttggctacac
      481 aatcctagct ccattgtagt gtag
//
LOCUS       XM_071832188             786 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842007), mRNA.
ACCESSION   XM_071832188
VERSION     XM_071832188.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..786
                     /gene="LOC139842007"
                     /note="uncharacterized LOC139842007; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842007"
     CDS             1..786
                     /gene="LOC139842007"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688289.1"
                     /db_xref="GeneID:139842007"
                     /translation="MRTHDDEVNGDDEVEMKFDEICELNIGEKEIVVGEVEEQNEAQS
                     ARRKRRYIRRDCVEAHNRLMKDYFVQDPKYPPEYFKRRYRMSQSLLEKIIEDLYANVY
                     MREPTEDNIRRLYHKHEELHGFPGMLGSIDCMHWAWGKCPNEWKGHFTRGNHGYPTIM
                     LEAVASYDNWIWHAYFGMAGSNNDLNVLNASPLFDSLLTDTAPQVPYEIGNVDFDRGY
                     YPADGIYPSWASFVKGFSSVVDAKRKYFTKKQSAARKDVERTF"
     misc_feature    304..>783
                     /gene="LOC139842007"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagaacac atgatgatga agttaatgga gatgatgaag ttgagatgaa gtttgatgaa
       61 atatgtgagt tgaatattgg tgaaaaagag atagttgttg gagaggtcga ggaacaaaat
      121 gaggctcaaa gcgcaagacg aaaacgtcga tacattcgtc gtgattgtgt agaagcgcac
      181 aatcgtttga tgaaagatta ctttgttcaa gatccgaagt atccccctga atatttcaaa
      241 cggcgttatc gaatgtcaca aagtcttctt gaaaaaataa ttgaagattt gtatgctaat
      301 gtatacatga gagaaccaac cgaggacaat atacgtcggt tgtatcataa acatgaagaa
      361 cttcacggct ttcctggaat gcttggaagc attgattgta tgcattgggc ttggggaaaa
      421 tgtccaaatg aatggaaagg gcatttcacc cgaggcaatc acggttaccc gacaatcatg
      481 ttggaagccg ttgcatcgta tgacaattgg atttggcatg catattttgg aatggccggt
      541 tcgaacaatg acttgaatgt ccttaatgca tctccattgt ttgatagttt actaactgac
      601 acggctcctc aagttccata cgaaattggg aacgttgatt ttgatcgagg ctactaccct
      661 gccgatggga tttacccttc atgggcttct ttcgttaagg gattctcaag tgttgttgat
      721 gcaaaaagga aatactttac aaagaaacaa tctgcagctc gtaaagacgt tgagaggaca
      781 ttttga
//
LOCUS       XM_071832189             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842008), mRNA.
ACCESSION   XM_071832189
VERSION     XM_071832189.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139842008"
                     /note="uncharacterized LOC139842008; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842008"
     CDS             1..603
                     /gene="LOC139842008"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688290.1"
                     /db_xref="GeneID:139842008"
                     /translation="MTSYFKYLQDGTLPADATKARRIKVNALLYVLENGVLYRKSFNG
                     PNVRYGLPNEIANGQVEVTNKEIVVGIKARLGLSQTRWVDEVPYVLWAHRTTPKQSMR
                     GIPFNLVYTKAVILAKIRVPTHRVLEFDFESNSSILRVILNLLEERRIRATIRQADNK
                     QRMAKYYNKRVKHVQIEEGDLVLRDNEASRQAKQGKLGPR"
ORIGIN      
        1 atgacctcgt attttaagta tttgcaagat ggaacgctgc cagcggatgc caccaaagca
       61 agacggataa aggtaaatgc tctgttgtac gttctggaga atggagtact ttacaggaag
      121 tcatttaatg gcccaaatgt gaggtatggt ttaccgaatg agattgcaaa tggccaagtt
      181 gaagtaacaa ataaagaaat tgtagtcggc ataaaggcta gacttggttt aagtcaaaca
      241 agatgggttg atgaagtgcc atatgttttg tgggctcacc gcacaacgcc aaaacagagc
      301 atgcgtggaa taccgttcaa cctagtatac actaaagcag taatactagc aaaaattcgt
      361 gtacctacac acagagtttt agaatttgat tttgaaagta actcatccat tttgcgagta
      421 attttaaact tgttagagga aaggcgtatt agggctacaa tccgtcaagc agataataag
      481 caacgaatgg caaagtatta taataaaaga gtaaagcatg tccaaattga agagggggat
      541 ctggttctaa gggataatga agcaagtagg caagcaaaac aaggaaagtt gggaccacga
      601 tga
//
LOCUS       XM_071832190            1548 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842009), mRNA.
ACCESSION   XM_071832190
VERSION     XM_071832190.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1548
                     /gene="LOC139842009"
                     /note="uncharacterized LOC139842009; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842009"
     CDS             1..1548
                     /gene="LOC139842009"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688291.1"
                     /db_xref="GeneID:139842009"
                     /translation="MGLPNGLPNGFPGSQTACHTPSANGLSKRPGLANGTCKRLAKRL
                     ASRLQVKNLNFDQSVSDYDIACQIGIHIGQAIVHGNNVEQNFDQGCEYLDLIVSDEEG
                     DRIGVTIKNFYKPKYEALLKIQHNYIIRNAFVGTNPFKGRTTHWNHESKLNINHETSV
                     LPLPESEWNCENGFKFIPFDEILDETKTKEHVTTDVIERVSNYSLEKQYRDGDDLQST
                     YIVIELKDLNDNLLSCTLWGTSDQDCVILIVHSGRTKKHGDMTVRSDWNFTQVSLNAD
                     VEPVHVFRKRLLEIHTTQDSQTSLAPTLTPPGKQLDGWFNQLSPGLHAIQAQIIVVLP
                     DDEWSYIGCRKCHRIVKPIEPVGDQTLDIDALLYKVNVRVEDTTDESNGTASLTLFET
                     QVLNIIGKSAYELHKSTPEGQDQPDELDTLIGKKCIFKVEVSEYNLKQSNLIFTVKDA
                     SEGEAFVEKFVEEYKKQKCGSSNGSDETPTVDLSNTTGYTPPKKVVKKEGREKPLSVK
                     SSTSKAM"
     misc_feature    <271..480
                     /gene="LOC139842009"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(280..291,295..297,316..324,328..330,373..375,
                     397..405,451..459)
                     /gene="LOC139842009"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(376..378,382..384,388..390,475..477)
                     /gene="LOC139842009"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    586..861
                     /gene="LOC139842009"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(589..597,661..672,676..678,697..705,709..711,
                     757..765,781..789)
                     /gene="LOC139842009"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(733..735,739..741,745..747,805..807)
                     /gene="LOC139842009"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    973..1350
                     /gene="LOC139842009"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(985..993,1111..1122,1126..1128,1156..1164,
                     1168..1170,1273..1275,1294..1302,1330..1338)
                     /gene="LOC139842009"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atgggccttc caaatggcct accaaacggc tttcctggct cacaaacggc ctgccacacg
       61 ccctcagcaa acggcctcag caaacggcct ggtctggcaa acggcacttg caaacgactt
      121 gcaaaacggc ttgccagccg tttgcaggtt aaaaacttga actttgatca atcagtttct
      181 gattatgaca tcgcatgcca gattggtatt catattggtc aagctattgt ccatggaaac
      241 aatgtcgaac aaaatttcga tcagggctgt gaatatctag acctgatagt ttctgatgag
      301 gagggtgata ggataggtgt taccatcaag aatttctata agcctaaata tgaggcttta
      361 ctaaaaatac agcataacta cattattagg aatgcttttg ttggtactaa tccttttaaa
      421 gggaggacga ctcattggaa tcatgaatct aaattgaata tcaatcacga aacatctgtg
      481 ttgccacttc cagaaagtga atggaactgc gaaaatggtt tcaaattcat tccgtttgat
      541 gaaatacttg atgaaactaa aacaaaagag catgtgacta cggatgtcat tgaaagggtc
      601 tcaaattata gtttagagaa gcagtatcgt gatggtgatg atctgcagtc aacatatatt
      661 gtaatcgagt tgaaggattt aaatgataat cttctctctt gcactttgtg gggaacctcc
      721 gatcaagact gtgtcatact aattgtccat tctggcagaa caaaaaagca tggcgatatg
      781 actgtacgtt ctgattggaa cttcactcaa gtttcattga atgctgatgt tgaacctgtg
      841 catgtcttta ggaagaggct attggaaata catactacac aggactcgca aacgtcattg
      901 gcacccacac tcactccacc aggaaagcaa cttgacgggt ggtttaatca attatctcct
      961 ggtcttcatg ctattcaagc acagatcatt gttgtgctcc cagatgatga atggtcgtat
     1021 attggatgtc gaaagtgcca tcgaattgtt aaaccaatcg aacctgttgg cgaccaaaca
     1081 cttgatattg atgcactcct gtacaaggtt aatgttcgtg tagaagatac aactgatgaa
     1141 tcaaatggaa cagcatcctt gacactgttt gagacgcaag ttttaaacat tataggaaag
     1201 tctgcatacg agcttcataa atcaacacct gagggtcagg accaaccgga tgagttagat
     1261 actcttattg ggaaaaaatg cattttcaag gttgaagtta gcgaatataa tctcaaacag
     1321 tctaatctca tctttactgt caaggacgca agtgagggtg aagcgtttgt tgaaaagttt
     1381 gtggaagaat ataaaaaaca gaagtgtggt tcttctaatg gatctgatga aactccaacg
     1441 gttgatcttt caaacactac cgggtataca ccaccaaaaa aggttgttaa gaaagagggc
     1501 agagaaaaac cgctttcagt taagtcatct acttcaaagg caatgtag
//
LOCUS       XM_071832192            3033 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842010), mRNA.
ACCESSION   XM_071832192
VERSION     XM_071832192.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3033
                     /gene="LOC139842010"
                     /note="uncharacterized LOC139842010; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139842010"
     CDS             1..3033
                     /gene="LOC139842010"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688293.1"
                     /db_xref="GeneID:139842010"
                     /translation="MARKLHQQLLVDAYTMIESERIHYIRMNPKIQRADTFLNLTFAT
                     LSGDVINSMLDNRVKLPSSFMGSARYMLENYRDAMALCRVYGYPGLFITFTCNSKWPE
                     ITRALEGTDLYTIEFQKCVLPHAHICIFLHESDKLPDSEDVDEYMSAELPDKDEDPEL
                     YKRVTELMIHGPCGEKNPSCLCTDIEKKCMKIFPKAFADITSVDHDGYPIYRRREDGR
                     TVIKQGHELDNRNVVPYNAFLFRKYQAHINVEWCNQVGAIRYLFKYINKDNDRVTAGL
                     CDEETDKSRNTMTVDTCHPVRLYGGYKNQHSIIFDEEDLIENVLDQPSVNTSQFLEWM
                     KCNQNCEEARQLTYVEFPTMFVWNKQTRKWTNRKRFTGSIGRIHHVPPITGELFYLGI
                     LLNKVKGPTSYEDIRTVDGKVCSTFKNACFEMGLLDDDQEYIDGVKDASTWGSGQFVC
                     NLFTQLLQSDSLSRPEDVFEKTFEYLSVEIIPRRLSAIQPTRQMLQDLVLIEIEKILQ
                     QNGKSLRNYSSMPYPSSSLFHLSENQLIIDELSYDMSVLESEHSHLIDKLTDEQRDAY
                     NTILNAMEKQIGGVFFLYGYGGTGKTFLWKTLSTALRSKGEIVLNVASSGIAALLLPG
                     GRTAHSRFAISIDPTDESFCTILPNSNLAGLIRRTKLIIWDETPMVNRRCVEALDHSL
                     HDICRTVNPNSNETPFGGKVVVFGGDFRQVLPVITRGKREDIVNASLNSSYIWNHVTV
                     LKLAVNMRLSNASLNNFDENNQDNLSDIRKFADWLLDVGNGNVNPSEDGISEIEMPED
                     VLVKDINDPIGSIINVIYPDFLNNLGNPTYYGQRAILAPTHEVVNIINDRMMQFPEGG
                     LPKHDLRLKVGVPVILLRNIDRASGLCNGTRLQIVELKDKVIKENFLTGMHVGTITAI
                     QRMLMVPSDKRIPIRFQIRQYPIFVCFAMTINKSQGQSLAHVGLFLPKPVFSHGQLYV
                     ALSRVTSKKGLKVLILNKDNQLSNTTTNVVFKEVLQHL"
     misc_feature    4..381
                     /gene="LOC139842010"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    1672..2679
                     /gene="LOC139842010"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(1759..1779,1993..1995)
                     /gene="LOC139842010"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
     misc_feature    2665..2949
                     /gene="LOC139842010"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    order(2713..2724,2830..2832,2836..2841)
                     /gene="LOC139842010"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350196"
     misc_feature    2848..2850
                     /gene="LOC139842010"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggcgcgaa agctgcatca acaactgttg gtagatgcat acacaatgat cgaatcggaa
       61 cgaatccatt acatcagaat gaacccaaaa atacagagag cagatacatt cttaaacctt
      121 acatttgcta ctctatcagg tgatgtgatc aacagtatgc tcgacaatcg tgttaagtta
      181 ccatcatctt ttatgggtag tgctagatat atgcttgaaa attaccgtga tgctatggca
      241 ttgtgtcgtg tatatggtta tccaggccta ttcattactt tcacatgtaa ctctaaatgg
      301 ccagagatca caagagcatt agaaggaaca gatctttata caatcgagtt ccaaaaatgt
      361 gtcttaccac acgcacacat atgcatcttc cttcatgaaa gcgataaatt gcctgattcg
      421 gaagatgttg atgagtacat gtctgctgaa ttaccggaca aagatgaaga tccagagcta
      481 tataaacgtg tcacagagtt aatgattcat ggcccgtgtg gtgaaaaaaa tccatcatgt
      541 ctgtgtactg atatcgaaaa gaaatgcatg aaaatatttc caaaggcttt tgcagacatt
      601 accagtgtag atcacgatgg ctatccgata tatagaagga gagaggatgg cagaacagtc
      661 atcaaacaag gacatgagct tgataataga aatgttgttc cgtataatgc atttcttttt
      721 agaaaatatc aagctcacat caatgttgag tggtgtaatc aagttggtgc tattaggtat
      781 ttgttcaagt atatcaataa agataatgat agagtcactg cagggctatg cgacgaagaa
      841 actgataaat caaggaatac tatgactgta gatacatgtc atcctgtgag gctgtatgga
      901 ggatataaaa atcagcactc aatcatattt gatgaagaag atctaattga aaatgttttg
      961 gatcaacctt cggttaacac atctcaattt cttgaatgga tgaagtgcaa ccagaactgc
     1021 gaagaagcca ggcaattgac ttacgtggag tttccaacaa tgtttgtatg gaacaaacaa
     1081 acaagaaaat ggactaatcg aaaaagattt accgggtcta ttgggcgtat acatcatgta
     1141 ccccctataa ctggtgaact cttttatctt ggtattctac tgaacaaagt taaagggcca
     1201 acttcatacg aagatatcag gactgttgac gggaaggtgt gttctacgtt caaaaatgca
     1261 tgctttgaaa tgggtttact ggatgatgac caggaataca tagatggtgt caaggacgca
     1321 agtacatggg gttctggaca atttgtttgt aatttattta ctcaactact tcagtctgat
     1381 agccttagtc gtccagaaga cgtttttgaa aagacatttg aatatttatc cgttgaaata
     1441 attcctcgcc gactttcagc aatacagcct acaagacaaa tgttgcagga tcttgtgttg
     1501 attgagatag aaaaaattct tcaacaaaat ggcaagtcat tgaggaatta tagttctatg
     1561 ccataccctt catcaagttt gtttcattta tctgaaaatc aactgatcat agacgaactt
     1621 tcttacgata tgtctgtgct cgaatcagaa cattcacatc taattgataa gttaactgat
     1681 gaacaacgag atgcatataa caccatttta aatgccatgg aaaaacaaat tggaggtgtc
     1741 ttctttttat acggatatgg tggcacaggt aaaactttcc tttggaaaac attatcaact
     1801 gcactgcgta gtaagggtga gatagtgtta aatgttgcat caagtggaat agcagctttg
     1861 ttattacctg gaggtaggac tgcccactcg cgttttgcaa tatcaataga tcctactgat
     1921 gaatctttct gtaccattct gcctaacagt aatttggccg ggttaattag aagaacaaaa
     1981 ttgattattt gggacgagac acccatggta aatcgcaggt gtgtggaagc gttagatcac
     2041 tcattacatg acatttgtcg tacagttaat cctaatagca atgaaactcc attcggagga
     2101 aaagtcgtgg ttttcggagg ggactttaga caagtgttac ccgttattac tcgtggtaaa
     2161 agagaggata tcgtcaatgc ttcactgaat tcttcataca tatggaatca tgttactgtt
     2221 ttaaaattgg cagttaacat gagattgtct aacgcttctt taaataattt tgatgaaaat
     2281 aaccaagaca atttgtccga cattcgtaag tttgcagatt ggttgttaga cgtcggtaat
     2341 ggtaatgtca acccaagtga agacggtatt tcagagatag aaatgcccga agatgtttta
     2401 gtaaaagaca taaacgatcc tatcggttct attattaatg ttatttatcc tgattttctc
     2461 aataaccttg gtaatcccac ttactacgga caacgtgcaa tccttgctcc aactcacgaa
     2521 gtggtaaaca tcattaatga tcgtatgatg cagtttcccg aaggtggttt accaaagcat
     2581 gatctacgac tgaaggtagg agtaccagtt atacttctta ggaatataga tcgggccagt
     2641 ggtttgtgca atggtacacg gttacaaatc gttgagctta aagataaagt tataaaggaa
     2701 aattttttga ctggaatgca tgttggtaca attacagcta ttcagcgaat gctaatggtt
     2761 ccttcagata aacgaattcc aatcagattc cagataagac aataccctat ctttgtttgc
     2821 tttgcaatga ctattaacaa aagtcaggga caatcattag cacatgttgg attatttctt
     2881 ccaaaacctg ttttcagtca cgggcaactg tatgtagctt tatctagagt tacttctaag
     2941 aaagggttaa aggttctcat tttgaacaaa gacaaccaac tttccaacac aactactaat
     3001 gtcgtgttca aagaagtatt acaacatcta tag
//
LOCUS       XM_071832193             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842011), mRNA.
ACCESSION   XM_071832193
VERSION     XM_071832193.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139842011"
                     /note="uncharacterized LOC139842011; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842011"
     CDS             1..813
                     /gene="LOC139842011"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688294.1"
                     /db_xref="GeneID:139842011"
                     /translation="MGHDIQACTFKENVWWNCHKSGHRSVDCPSARKMSSGVGAGART
                     ASVEGSSASSTGQKHKTPPRPKARAFQMSVDATTTADDAITGMVLVNSTPARVLFDCG
                     ANRSFMATRFCDKLNLHVSILPEPLEVEVSSGKTVPVTTYVSGISIEIDGSVFPVTCL
                     VIPIPSFDVVLARGERGGFGCPLISMMKARKSIVKGCDTFLAYVIDAKKEKKMVADIP
                     AVRDFPEVFPDELPGLPPVREVEYRIELMQGSKPVAKAPYRLATFEIRDMLT"
     misc_feature    196..>513
                     /gene="LOC139842011"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(298..300,304..306,310..312,385..393,508..510)
                     /gene="LOC139842011"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    298..306
                     /gene="LOC139842011"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    298..300
                     /gene="LOC139842011"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(385..396,406..417)
                     /gene="LOC139842011"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgggtcacg atatccaggc ttgcacattc aaagaaaatg tttggtggaa ttgtcataaa
       61 tcagggcata ggtcagttga ttgtccatca gcaagaaaga tgagttctgg ggtaggggca
      121 ggagcaagga cagcgtcagt cgagggatct tcagcttcat caactggaca gaagcataag
      181 actcctccaa gacctaaagc aagagccttc cagatgtcag tagacgcaac tactactgct
      241 gacgatgcta tcactggaat ggttttggtt aactctacac ctgctcgtgt attgtttgat
      301 tgcggagcca atcgttcttt tatggctact aggttctgtg ataagttaaa cttgcatgtt
      361 tctatattac ctgaaccgtt agaagtggaa gtatccagtg gtaagaccgt tccagtcaca
      421 acatatgtgt ctggaataag tatagaaata gatgggagtg tatttccggt gacttgctta
      481 gtgataccca tacctagctt tgatgtagtt ttagcccggg gtgaacgggg tgggtttggt
      541 tgtcctttga tttcgatgat gaaggctagg aaatcgatag taaagggatg tgatacattt
      601 ctagcatatg taattgatgc taagaaagag aaaaagatgg tagctgatat tccagcagtg
      661 cgtgacttcc cagaagtatt tccagatgaa ttaccgggtt tgccgccagt tagggaagta
      721 gaatacagaa ttgagttgat gcaaggatct aaaccagtgg ctaaagctcc ttataggtta
      781 gctacgttcg agattcgtga catgttgacg taa
//
LOCUS       XM_071832194             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842014), mRNA.
ACCESSION   XM_071832194
VERSION     XM_071832194.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139842014"
                     /note="uncharacterized LOC139842014; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842014"
     CDS             1..591
                     /gene="LOC139842014"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688295.1"
                     /db_xref="GeneID:139842014"
                     /translation="MDANNGILPLAYGIGAGETTDHWTWFFGKRNRKSLSWTVKPISQ
                     VKFEVLDMKKGGKVNLQDKTCTCKQWQFSGIPCGHVMAVARYFVLRNVTTHVQKYFHT
                     ETYKSAYMEDINPLDHISEWIDPGHLQTVLPPLVTKRQSGRPKSTARIPSQGEDKDNF
                     KSKRKCSRCLEYGHTRSTCTAHYDLSDGKQKSKCNS"
     misc_feature    187..267
                     /gene="LOC139842014"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atggatgcta acaatggaat ccttccatta gcctacggta ttggagcagg agagaccacc
       61 gatcattgga catggttttt tggtaaaaga aatcgtaagt ctcttagttg gactgtcaaa
      121 ccgatatcac aagttaagtt tgaggtattg gatatgaaaa aaggcggtaa agtcaatcta
      181 caagataaaa cttgcacatg taaacaatgg cagttttccg gtataccctg tggacatgta
      241 atggcagtag caaggtattt tgtcctacgt aacgttacta cacacgttca gaagtatttc
      301 cacactgaaa cgtacaagtc ggcatacatg gaagatatta acccgctaga tcatatttct
      361 gaatggatag atccaggaca cctacaaacc gtcctaccgc cattggttac aaagcgacaa
      421 tcgggtagac cgaagagtac tgctcgtata ccgtcccaag gagaggacaa agacaacttc
      481 aaatctaaaa gaaaatgcag tcgttgcttg gaatatggac atactagatc aacttgcacc
      541 gcacattatg atctttctga cggtaaacaa aagtccaagt gtaactcata a
//
LOCUS       XM_071832195             453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842015), mRNA.
ACCESSION   XM_071832195
VERSION     XM_071832195.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..453
                     /gene="LOC139842015"
                     /note="uncharacterized LOC139842015; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842015"
     CDS             1..453
                     /gene="LOC139842015"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688296.1"
                     /db_xref="GeneID:139842015"
                     /translation="MKAPMHLIEKGALYRKSFLGPHLLCLSPSQVEVIIREVREALCA
                     LHSGHKTVASKIMRLGHYWPSMQFKGNSFRDWCQELNVKQTFTSDAHSEANDQCEVTN
                     REIVLGIKARLGLCRKGWVDELPNVLWEHRTIPKGSNNETPFNMDSDI"
ORIGIN      
        1 atgaaagcac caatgcattt aatagaaaaa ggagcacttt atagaaagtc ctttttggga
       61 ccacatttac tatgtttaag tcctagtcaa gttgaggtga tcattagaga agttcgcgaa
      121 gcgttgtgtg ctttgcattc agggcacaag acagttgcat ctaaaataat gcgacttgga
      181 cactattggc cgtcaatgca atttaaggga aactctttta gggattggtg ccaagaattg
      241 aatgtaaaac aaacattcac atcagatgca cactctgagg ctaatgatca atgtgaagtt
      301 acaaatcgcg aaattgtgct gggtattaaa gcaagacttg gtttatgtcg aaagggttgg
      361 gtggatgaat tacctaacgt gctttgggaa caccgcacaa taccaaaagg ctctaacaat
      421 gaaacaccat tcaatatgga tagtgacatt tga
//
LOCUS       XM_071832197            1149 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842016), mRNA.
ACCESSION   XM_071832197
VERSION     XM_071832197.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1149
                     /gene="LOC139842016"
                     /note="uncharacterized LOC139842016; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842016"
     CDS             1..1149
                     /gene="LOC139842016"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688298.1"
                     /db_xref="GeneID:139842016"
                     /translation="MSEEEVENKINQTITNLLPNIIAQAIDAMRNQGGKTFKHEDGDE
                     YVEKKARPLSFSTAVEAENWITHIEKIYRVLGCEERFWVPLAVYKLEGDAQHWWISLR
                     QAKGGIDFEDSLDWADFKELFFRQYFSEAEKEVVIREYANIKQGNDESINDFTKRFLR
                     LVGLIGAAAGSAEDQARKYKWAVHGRYRSKMINLKCFDVVEAADYARNLEMERTEYLN
                     TKNDEGKNKRVKIAQPLRSVPPPTNKHGQQSGNQGYRGNNWNNRGNQLRIDNGPNNNN
                     HVISAPKAQKLISHGCVGYLASIQNLSIESPSLENIDVVREFPDVFPDELQGLPPVRE
                     VEFLIDLIPGSQPISKAPYRMAPLELQELKEQLQELIDCGFIRPSVSP"
     misc_feature    253..537
                     /gene="LOC139842016"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
ORIGIN      
        1 atgtctgagg aggaggtaga aaacaagatt aaccaaacta tcacgaattt gttacccaac
       61 attatagctc aagctattga cgctatgcgt aatcaaggtg gcaagacttt taagcatgaa
      121 gacggggatg agtatgtgga aaagaaagct cgtccgttgt cattcagcac tgctgttgaa
      181 gctgaaaatt ggatcactca cattgagaag atataccgag tgcttggttg tgaagagagg
      241 ttttgggtgc cattggctgt ttataaacta gagggggatg ctcagcattg gtggatctct
      301 ttgagacaag cgaaaggggg tatcgatttt gaggattcat tagattgggc tgatttcaaa
      361 gagttgtttt tccgtcagta cttttctgag gcggagaaag aggttgtgat tcgggagtat
      421 gcgaatatta agcaagggaa tgatgagtct attaatgatt tcactaagag gtttttgaga
      481 cttgtaggtt tgattggggc tgctgctggg tctgctgagg accaagcccg taagtacaaa
      541 tgggctgttc atgggcgtta ccgctctaaa atgattaatc tgaaatgttt tgatgtcgtt
      601 gaggcagccg attatgctcg gaatttagag atggagcgaa ccgagtattt gaatactaaa
      661 aatgatgagg gtaaaaacaa gagggttaaa attgcacaac cattacgatc tgtgcctcca
      721 ccgactaaca aacatggtca gcaatctggg aaccaagggt atcgtggtaa taattggaat
      781 aatagaggaa atcagctaag gattgacaac gggccaaata ataataatca tgttatctca
      841 gcgcctaagg cgcaaaagct catttcacat ggttgtgttg gttatttagc ttctattcag
      901 aatttgtcta tcgagagtcc ttcgcttgaa aatattgatg ttgttcgaga gtttcccgat
      961 gtatttcctg atgaattgca gggtttgcct ccagtccgtg aagttgaatt tttgattgat
     1021 ttgattcctg gttctcaacc gatatcaaaa gctccttatc gtatggcacc actagagttg
     1081 caagaactca aggagcaatt gcaagaactg atagattgtg gttttattcg accaagtgtg
     1141 tccccttga
//
LOCUS       XM_071832198             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842017), mRNA.
ACCESSION   XM_071832198
VERSION     XM_071832198.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139842017"
                     /note="uncharacterized LOC139842017; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842017"
     CDS             1..447
                     /gene="LOC139842017"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688299.1"
                     /db_xref="GeneID:139842017"
                     /translation="MYEGVKSCVRTPVGNTEVFLIEVGLHQGSALSPFLFTLILDGLS
                     RGIQGCIPWCLIFADDIVLVSESKDELNRRLEQWRVALERNGLQISRHKTEYLRCHFN
                     RNGDEQDDGVNVCIGYQILHLQTSFRYLGSVLHKSGENRRRRVASY"
     misc_feature    <55..402
                     /gene="LOC139842017"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    82..84
                     /gene="LOC139842017"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgtacgaag gagtgaagtc ttgcgttcga acgcctgtgg gaaataccga agttttccta
       61 atagaagtag gcctacatca gggatcggcc cttagcccgt ttcttttcac tttgatcctt
      121 gacggactgt ctcgagggat acaggggtgt atcccttggt gtctaatttt tgccgatgat
      181 attgtgcttg tttcggaatc taaggatgag cttaatagaa gactagagca atggagggtg
      241 gccttagaaa ggaatggcct gcaaattagt agacataaga cggaatatct taggtgtcat
      301 ttcaatagga acggagatga acaagatgat ggtgtgaacg tctgcattgg ataccagatc
      361 ttgcatctac aaacttcgtt tagataccta ggctcggtgc tacacaaatc gggggagaat
      421 agacgaagac gtgttgcatc gtattaa
//
LOCUS       XM_071832199            2391 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842018), mRNA.
ACCESSION   XM_071832199
VERSION     XM_071832199.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2391
                     /gene="LOC139842018"
                     /note="uncharacterized LOC139842018; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842018"
     CDS             1..2391
                     /gene="LOC139842018"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688300.1"
                     /db_xref="GeneID:139842018"
                     /translation="MSGDDDIGPSKTTQVSSLDFGDPLYLHASDTSTTSLISLKLKGT
                     ENYNVWSRAMTLALQTKNKFGFVDGSYIKSQTDNVLMLQWDRCNSVVLSWILKSISEE
                     LFSGQVFAKSAQTVCEELKENGSGNFTVSDYYHKLNALWKQFDALVKSPTCVCDANKE
                     FKTHNDLIKLMQFLMGLDESYAYKLGHTIDRCYEIVGYPHGWVKKADPKPVMSNNSVS
                     NINTTESVSQPFNAEKISQLMSLLHNQSTQGNAHANMAGSFLNCNVVFNSKFDTFFKS
                     NGTINNGFNDKWIIDSGETRHMTGSCEGLVNVFDVSKLNMTVGHPNGTLAKITNIGNL
                     QLSKNFILKDVLVIPGYCVNLLSVNKLLKDYNMFIGFTSGNCFIQDLDLKKVVGIGNA
                     VDGLYLFDKGNGIVSNKSSMSPSLNDKCYGSANLWHSRLGHPSTHVLKILKDRIGVNP
                     DSAGDVCEIFHKAKQSRDPFPLSDHTSSKIGDLIHLDVWGPYKVNSYGGFKSFLTIVD
                     DNSRAMWVYLLKTKIDVFDNILCFVNLIKTLSLMLRLPSSVLHGKSPFEMIYDSVPNL
                     FHMRVFGCLCFASTLYNSDKFCSKSEKCVFLGYSNVKKGYKLLSLESKTILFSRDVKS
                     YETIFPYNPKSKNNNISSDNDHTNSFESVIFEPNTSQSPNDDGGDNTEEDSGSDHDPI
                     KTSEEEIEIHGTSSTTSSSSENDPGQSNTDHGSINEPSGNPDNLRRSSRTRTFPSKFN
                     DYYVNFKVRYPMSNYCNYLGMHDDVKCFSATLNKAVEPHSYEEACKNPKWVEAMNN"
     misc_feature    79..219
                     /gene="LOC139842018"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    1183..1395
                     /gene="LOC139842018"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
ORIGIN      
        1 atgtctgggg atgatgatat tggaccatca aagactactc aagtgagtag ccttgatttt
       61 ggtgatcctc tttacttaca tgctagtgac accagcacca cttctcttat ctccttaaaa
      121 cttaagggga ccgagaacta caatgtctgg agtagggcta tgactttagc tctgcaaact
      181 aagaataaat ttggctttgt tgatggttct tacataaaga gtcaaactga taatgtgctt
      241 atgttacaat gggataggtg caactctgtt gtactatcct ggatactaaa atctatctct
      301 gaagaattgt tttctgggca agtgtttgcc aaatctgctc aaactgtttg tgaagaatta
      361 aaggagaatg gttctggcaa cttcactgtg tcagactact atcataaatt aaatgcttta
      421 tggaaacaat ttgatgctct tgttaagtca cctacttgtg tgtgtgatgc taataaggaa
      481 ttcaaaactc acaatgattt aattaaactt atgcaattcc tcatgggtct tgatgagtct
      541 tatgcttata aacttggtca cacaatagat aggtgctatg aaattgttgg ttatccccat
      601 gggtgggtta aaaaggctga tcctaaacct gtcatgagta ataactctgt gtctaatatt
      661 aatactactg aaagtgtgtc tcaacccttt aatgctgaaa aaatttccca actcatgagt
      721 ctactgcata atcaatccac acaagggaat gctcatgcca atatggcagg tagtttctta
      781 aactgtaatg ttgttttcaa ctctaagttt gacacattct ttaaatccaa tggtactatt
      841 aacaatggct ttaatgacaa atggataatt gattctggag aaaccagaca tatgactgga
      901 tcttgtgaag gtctagttaa tgtgtttgat gtttcaaaac ttaacatgac tgtaggacat
      961 ccaaatggca ctttagctaa gatcactaat attggaaact tacagctttc aaaaaacttt
     1021 atcttaaagg atgttttggt cataccagga tattgtgtca atcttctttc tgttaacaaa
     1081 cttttaaaag attacaacat gttcattggt ttcacaagtg gaaactgttt cattcaggat
     1141 ttggatctaa agaaggttgt agggattggt aatgctgttg atggtctata cttgtttgat
     1201 aaaggtaatg gcattgtctc aaataagagt agcatgagtc caagtttaaa tgataagtgt
     1261 tatgggtctg ctaacctgtg gcacagcaga ttgggacacc cttccactca tgtccttaag
     1321 attctcaagg acagaattgg ggtcaatcct gattctgctg gtgatgtctg tgaaatcttt
     1381 cataaggcaa aacagtcaag ggatcccttt cctttgagtg accatacttc ctcaaaaata
     1441 ggtgatctaa ttcatctgga tgtgtggggc ccttataaag tcaacagcta tggtgggttc
     1501 aaatctttcc tcaccattgt tgatgacaac tctagagcta tgtgggtgta cttgctaaaa
     1561 accaaaattg atgtttttga taatattctg tgttttgtta atctcattaa aactcttagt
     1621 ttaatgctaa ggctgccctc atctgtgtta catggaaagt ccccttttga aatgatttat
     1681 gattctgttc ctaatctctt ccacatgaga gtgtttggat gtctttgttt tgctagtact
     1741 ctttataata gtgataagtt ttgtagtaag tctgaaaaat gtgtcttttt gggttactca
     1801 aatgtcaaaa aaggatataa gcttctgagt cttgagtcaa aaactatttt gttctctagg
     1861 gatgtaaagt cttatgaaac tatatttcct tataatccaa aatcaaaaaa taataatata
     1921 tctagtgata atgatcacac aaactctttt gagtctgtca tttttgaacc aaacacttct
     1981 caaagtccca atgatgatgg gggagacaat actgaagaag acagtggcag tgatcatgat
     2041 cccattaaga cttcagagga ggagattgag atccatggca cctcatctac cacatcatct
     2101 tcttctgaaa atgaccctgg acaaagtaac acagatcatg gtagcataaa tgaaccaagt
     2161 gggaacccag ataacttaag aaggtctagt aggactagaa cctttccctc taaattcaat
     2221 gactattatg tcaactttaa ggtgagatac cctatgagca attattgtaa ttatttaggt
     2281 atgcatgatg atgtcaaatg ttttagtgct acccttaaca aggctgttga acctcattct
     2341 tatgaagaag cctgcaaaaa cccaaaatgg gtagaagcaa tgaacaatta g
//
LOCUS       XM_071832201             579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842021), mRNA.
ACCESSION   XM_071832201
VERSION     XM_071832201.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..579
                     /gene="LOC139842021"
                     /note="uncharacterized LOC139842021; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842021"
     CDS             1..579
                     /gene="LOC139842021"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688302.1"
                     /db_xref="GeneID:139842021"
                     /translation="MKLWERSIETRHRREIKVPENKFGFMPGCSSMEAIHIIRSLMEK
                     YREKQKNLHIAFLDLEKSYDSVPHELIWKTLNGRDELSQGIQESIPWCLIFADDIVLF
                     SESQDELNGRLEQWRNAFEQNGLRISRNKSEYLRCDFGRVEEDQNVTMDVRTGDQVLL
                     PHDCFRYLGSMLHKSGRIDDDVTHHIKVGWLK"
     misc_feature    1..516
                     /gene="LOC139842021"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(172..189,283..285,289..294,502..507)
                     /gene="LOC139842021"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(172..189,289..291)
                     /gene="LOC139842021"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgaaactat gggagagatc gattgagact aggcatagac gcgagataaa ggtgccagag
       61 aacaaatttg ggttcatgcc aggatgctct tcgatggagg caattcacat tattagaagt
      121 cttatggaga agtatagaga gaaacaaaag aacctacaca tagctttctt ggacttggaa
      181 aaatcttatg atagtgtccc acatgagttg atttggaaga cccttaatgg cagagatgag
      241 ttgtctcaag ggatacaaga gagtatcccc tggtgcttga tttttgctga tgatattgta
      301 ttattttcgg aatcccaaga tgagttaaat ggaaggctgg agcaatggag gaatgccttt
      361 gaacaaaatg gacttcggat tagtagaaat aaatcggaat atcttagatg tgacttcggg
      421 agggtcgaag aagatcagaa tgttacaatg gatgtccgta ctggggacca ggtcctactt
      481 ccacatgatt gctttagata cttaggctcg atgctgcaca aatcgggaag gatagatgat
      541 gatgtgaccc accatataaa ggtgggatgg ttgaagtag
//
LOCUS       XM_071832202             564 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842022), mRNA.
ACCESSION   XM_071832202
VERSION     XM_071832202.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..564
                     /gene="LOC139842022"
                     /note="uncharacterized LOC139842022; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842022"
     CDS             1..564
                     /gene="LOC139842022"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688303.1"
                     /db_xref="GeneID:139842022"
                     /translation="MDLGTHGRVNRRARVIQPRILWKNLNGEKVETFRANVVERVGAE
                     IENVDFIYMDQMWNSLTSTIRGGAKESLGVAVGTSRDQKGCRESWWLSDEVQNKVTLK
                     QARFRELTSFRGGTLADRNSIEKSYKEAKREAKIAMMLAKDKAYEEFCKRLDSKEGAN
                     DIYRIAKSRERRRRDLDNIKYIKDETG"
ORIGIN      
        1 atggatttag gtacccatgg acgggtaaat aggagggcga gagtgataca acctagaatc
       61 ctctggaaga acttaaacgg agagaaagtg gagactttta gagctaatgt tgttgaaaga
      121 gtgggtgctg aaatagaaaa tgtagacttt atttatatgg accagatgtg gaacagccta
      181 acgtccacca ttagaggggg ggccaaagaa tccttgggag tggcagttgg gacgtcgaga
      241 gaccaaaagg gttgtagaga atcatggtgg cttagtgacg aggtacaaaa taaagtcaca
      301 cttaaacagg cgaggtttcg ggagcttacc tcctttagag ggggtacact agcagacaga
      361 aatagcatag aaaagagtta taaagaagcc aaaagagaag caaagatcgc catgatgctt
      421 gcaaaagata aagcatacga agaattttgt aagagactag actctaaaga aggagcaaat
      481 gacatctaca ggatagccaa atctagggag cgtcggagaa gagacctgga taacatcaaa
      541 tatatcaaag atgaaactgg ttaa
//
LOCUS       XM_071832203            2073 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139842023), mRNA.
ACCESSION   XM_071832203
VERSION     XM_071832203.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 67% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2073
                     /gene="LOC139842023"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842023"
     CDS             1..2073
                     /gene="LOC139842023"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071688304.1"
                     /db_xref="GeneID:139842023"
                     /translation="MSIGDKNVQVDDLIHRNDQFHIDDDFVVNDGDDDEQYQFFDVSD
                     QFDHIEIFKHHDTDGECVYVPKSFCVGSEEISSSGIKSWIPNVDKSLLPAFGMVFDSI
                     DLSYNFYKEYAVNGGFEVRKSSSKRGFDDFGNSLVRYKYFLCSKQGSNEEILHKPEDV
                     STTDDIFDMNADCFGEVNTLTYVDDNVGYRVKQTQPIQFVKAHNHILVHPHHIKHLKS
                     QRRLNNSQKSFLFKLNQAGIGPCRGYRILGKVKGGDEDVGCSKWELAGAFWADQALKE
                     NYKVFGDVVSFDSTFRTNKYDMKFIPFTGIDNQKKCVTFGAALLAKEDADSYKWLCEA
                     FKKAFPEEPQIVLTDQDPSMIVAIEAVFKKARHILCMWHIGPAVSNVGFKDSISQIVW
                     IDKLDPDEFVNRWVSIVARYKLEDNEWLNEMFNLRRIWIPTYFRYWDMSGLICTSSRS
                     ESENHMFQQLMSNSSTLVEFISFFETAMQIQRQVQSTKNPESRYVIPKVVIDYEIEQH
                     AVQLYTRKFFGEVQGQIKAASRYCMNYKVDRKNGFTEYTVMDRSVTNNGLANNLDKAG
                     NPRAFDEYIPAVSVVKFSEKSKEVSCDCRLFERIGYFCRHILYVLMMTNVKVIPNKYV
                     MKRWCIDAITLKDPNTYFDSNQVRSSEEFEYSKAAVIIAKEDEHKYSCGFRIKQQRLK
                     WRLIWVSR"
     misc_feature    157..>1896
                     /gene="LOC139842023"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgtcgatcg gtgataaaaa tgttcaagtt gatgacttga ttcatcgtaa tgatcagttt
       61 catatcgatg atgattttgt tgttaacgac ggcgatgatg atgaacaata tcagtttttt
      121 gacgtcagtg atcaatttga tcatatcgag atcttcaaac atcatgatac tgacggagaa
      181 tgtgtttatg tacccaaaag tttctgtgtt ggttctgagg aaatatcgtc ttctggtata
      241 aaatcgtgga tacctaatgt tgacaaatct cttttaccag ctttcggaat ggtttttgat
      301 tcaatagatt tatcatataa tttctacaag gagtatgcag ttaatggtgg ttttgaggta
      361 aggaagtctt catcaaagag agggtttgat gattttggta atagtctagt cagatataaa
      421 tattttctat gtagcaagca aggatctaat gaagagattt tgcataaacc tgaggatgtt
      481 tcaactactg atgatatatt tgatatgaat gcagattgtt ttggggaagt taatacatta
      541 acgtatgttg atgataatgt tggttataga gttaaacaga cgcagcctat tcaatttgtg
      601 aaagctcata accatatatt agttcatcct catcacataa aacatttaaa atctcaaaga
      661 cgattaaata attctcaaaa atcattttta ttcaagttga atcaagctgg gattggtcct
      721 tgtagaggtt atcgaatttt agggaaagtg aaaggtggtg atgaagatgt tggatgttcg
      781 aaatgggagt tagctggagc attttgggct gatcaagctt taaaagaaaa ttacaaagtt
      841 tttggagatg tagtttcatt tgattcaacc tttcgaacaa acaaatatga tatgaagttc
      901 ataccattta ctggtattga taaccagaag aagtgcgtta cttttggtgc tgcgttatta
      961 gcaaaagaag atgcagattc gtataagtgg ttatgtgaag cttttaagaa agcattcccc
     1021 gaagaaccgc aaatagtttt gactgatcaa gatccctcca tgatagttgc tattgaagct
     1081 gttttcaaga aagcaagaca catactttgt atgtggcata ttggtcctgc tgtttcaaat
     1141 gtgggtttta aagattctat ttctcaaatt gtctggattg acaagttaga ccctgatgag
     1201 tttgttaata gatgggtctc aattgtggct cgttataaat tagaagataa cgagtggtta
     1261 aatgaaatgt ttaatcttag gagaatatgg ataccaacct attttagata ttgggatatg
     1321 tcagggttaa tatgcacttc ttcccgttct gagagtgaaa accacatgtt tcaacaattg
     1381 atgagcaata gttcaacctt agttgaattt atcagttttt tcgaaactgc tatgcagatt
     1441 caacgacaag tgcagtctac aaaaaatccc gaatcacgat acgttatccc taaagttgtt
     1501 attgattatg agattgaaca acatgctgtg caattgtata ctagaaagtt ttttggcgaa
     1561 gtacaaggtc aaatcaaagc tgcatcgaga tattgtatga attataaagt tgatcgtaaa
     1621 aatggtttta cagagtatac tgtaatggac agaagtgtta caaataatgg tttagcaaat
     1681 aatcttgata aagctggtaa tccccgggct tttgatgaat acattccagc agttagtgtg
     1741 gtaaagtttt cagaaaaatc aaaagaagta tcttgtgatt gtagattatt tgaaagaata
     1801 ggttactttt gtcgacatat tttatatgtg ctaatgatga caaatgttaa agtaatccca
     1861 aacaagtatg ttatgaaaag atggtgtatt gatgctatta ctttaaaaga tccaaacaca
     1921 tattttgatt ctaatcaagt tagatcttcc gaagagtttg aatacagcaa ggctgcagta
     1981 attatcgcga aggaagatga acataagtat agttgtgggt ttcgaataaa acaacaaaga
     2041 ttaaagtggc gtttgatatg ggtttcaagg tga
//
LOCUS       XM_071832204             933 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842024), mRNA.
ACCESSION   XM_071832204
VERSION     XM_071832204.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..933
                     /gene="LOC139842024"
                     /note="uncharacterized LOC139842024; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842024"
     CDS             1..933
                     /gene="LOC139842024"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688305.1"
                     /db_xref="GeneID:139842024"
                     /translation="MGRGGGLDTNVLCRNISGRTIWKEIFKAGKFADKLGTFFTSSIS
                     KCIGNGTSISFWHDIWIGTENLKTTFHRLYMLESQKDATVAERISNVNSNSIGSWDWS
                     RAPSGRALDELTELTNLISSVSTASTLEIYYFPATNTKPKKVFIFIWRVIQQKIPLRS
                     ELDKKGIDLHTILCPVCDHHIEAIDHALINCPNVSSIWAQLLDWWNQNNTTISDINDA
                     IISDQGFSHNSVGFAIWQSTKWIACYIIWKHRNLKVFSNKIWNPATIISEIQSQSFSW
                     ISTRSRKKKPIEWHQWLLNPSFYVASPPNRMGIG"
     misc_feature    <421..576
                     /gene="LOC139842024"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggccggg ggggtggttt ggacactaat gttttatgca ggaatatttc aggtcgtacc
       61 atttggaaag agattttcaa agccggaaaa tttgcagaca aactaggcac tttctttaca
      121 tcttcaattt caaagtgcat cggcaatggc acatcgatta gcttctggca tgacatatgg
      181 atcggaactg aaaatctcaa aactactttt catagattat atatgctgga atctcaaaaa
      241 gatgcaactg ttgctgaaag aatatcgaat gttaattcca attcaatcgg aagttgggat
      301 tggtcccgtg cacctagcgg tcgggctttg gatgaactta cggaactcac taacttaata
      361 tcatccgtaa gtacggcgtc cactctcgaa atatattact tccccgcaac aaatacgaaa
      421 ccgaaaaagg tcttcatatt catatggaga gtcattcaac aaaaaatccc gcttagaagt
      481 gaacttgaca aaaaaggaat tgatctgcat actatcttgt gtcccgtatg tgatcatcat
      541 atcgaagcca ttgaccatgc gttgattaac tgtcctaatg tgtcttcaat ttgggcacaa
      601 ctactagatt ggtggaacca aaataataca acaatttccg acattaacga tgccatcatc
      661 tccgaccaag gtttctcaca taactccgtt ggatttgcca tatggcaatc tactaaatgg
      721 attgcgtgct atattatatg gaaacatcga aacctaaaag tattctcaaa taaaatatgg
      781 aatcccgcca cgattatctc cgagattcaa tctcaaagtt ttagctggat ctcaactaga
      841 tctcggaaga aaaaacctat tgaatggcat caatggctcc tcaacccctc cttttatgtg
      901 gcatcgcctc caaaccgcat gggaatcggt taa
//
LOCUS       XM_071832206            1266 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842027), mRNA.
ACCESSION   XM_071832206
VERSION     XM_071832206.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1266
                     /gene="LOC139842027"
                     /note="uncharacterized LOC139842027; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842027"
     CDS             1..1266
                     /gene="LOC139842027"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688307.1"
                     /db_xref="GeneID:139842027"
                     /translation="MAKKKKIPMILLKIDFSKAYDSVSHAFLLTVLEKMGFGPKFTSW
                     IQCCISNVNFSVLLNGSPSREGIMHRGLRQGNPLSSFLFIIVAEILSKFLSKDLANGI
                     LKGCPFGNGFSINHSQFTVDTIIFAQPSFHELNRIKLILEFFFFRLSGLQMNVVKTTL
                     YGIHVSRADMISYSAIFDCKVGTFPLSYLGVPIGLNRKRIIMWDPIVSNLHSSQLSPI
                     WKDLLNLQKEESLNPIVGPNVWRWKIGNGSSISFWFDSWANGTILKDEFPTLFFITRQ
                     QSAALNCFRIPTDLADAQSGWDLHLQHPLLRYDSFGADQLLQLIRPFKLNSAAHDYVL
                     WNPGNEDPYSVATGVRLIMQSGTLISPAWPKVIWGNNVPSKIMLFHWLAFKKSIPVKD
                     VLARRHILPPSLSTLCVWCSLNVETNDNL"
     misc_feature    <4..579
                     /gene="LOC139842027"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(43..60,220..225,355..357,361..366,565..570)
                     /gene="LOC139842027"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(43..60,220..222,361..363)
                     /gene="LOC139842027"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    223..225
                     /gene="LOC139842027"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    1027..1263
                     /gene="LOC139842027"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggctaaga agaaaaagat tccaatgata cttttgaaaa ttgatttttc gaaagcatac
       61 gatagcgtct ctcacgcttt tttactcacg gttcttgaga aaatggggtt cgggcccaag
      121 tttacttcat ggattcaatg ttgcatttca aatgtcaatt tctcggttct tttaaacggg
      181 tctccatccc gtgaaggtat aatgcatcgt ggtctaagac aaggtaatcc gctatcgtct
      241 tttttattca tcattgtggc tgaaatttta agcaaatttt tatctaagga tcttgcaaac
      301 ggcattctaa aggggtgtcc ttttggtaat gggttttcaa ttaatcattc tcaattcact
      361 gtcgatacca ttattttcgc ccaaccgtct tttcatgaac tcaatcggat aaagcttatt
      421 ttagagtttt tttttttcag attatccggg ttacaaatga atgtcgttaa aacaacactt
      481 tatggcatac atgtgtcaag ggctgatatg atttcttatt cagccatttt cgattgcaaa
      541 gtcgggacgt ttcctttatc ctatttaggt gtaccaattg gccttaatag gaaaagaatt
      601 ataatgtggg atcccattgt gtctaactta cattcttctc aactctctcc gatttggaaa
      661 gatttattaa atcttcaaaa agaagaatcg ttaaatccca ttgttggtcc taatgtgtgg
      721 agatggaaaa tcggcaatgg gtcaagtatt tcattttggt tcgattcttg ggcgaatggt
      781 acaattttaa aagacgaatt tcctacattg ttctttatca cacgacaaca aagtgcagcc
      841 ctcaattgtt ttcgaattcc tactgatcta gctgatgccc aaagtggttg ggatctgcat
      901 ttacagcacc cccttttgcg ttatgattca ttcggagctg accaactgct gcagcttatt
      961 cgacccttca aattaaactc ggctgcccat gattatgtgc tttggaatcc gggtaacgaa
     1021 gacccgtact cagttgcaac tggtgtacgt ttgataatgc agtcaggtac tttaatctct
     1081 cccgcttggc ctaaagttat ttggggcaat aatgttccct ccaaaattat gctttttcat
     1141 tggctagctt ttaaaaaaag tatccccgtt aaagatgttt tggcccggag acatatatta
     1201 cctccctcac tctcgacttt atgtgtttgg tgctccctta atgtcgaaac taatgataat
     1261 ctctaa
//
LOCUS       XM_071832207            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139842028), mRNA.
ACCESSION   XM_071832207
VERSION     XM_071832207.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139842028"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842028"
     CDS             1..1035
                     /gene="LOC139842028"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071688308.1"
                     /db_xref="GeneID:139842028"
                     /translation="MDFLALSIDLLFDSTSSEEEEEIQPRTCFQRQPRRFLNRDREAA
                     GELLWNDYFCENPTFPDDIFKRRFRMRKVLFLRIRDGILQHSYTPNAPDHFTFFQQRP
                     DALGRLGFSTIQKITCALRQLSYGMTADIFDEYIKMAEKTGYVTLNNFCKCIIDLYGR
                     KYLWKPNAADIAWLYSAHEEKHGFKGMLGSIDCQYTRGDHGHPTIILEAVASYDMWIW
                     HAFFGMAGSNNDINVLNHSPLFDSLRKDRVAPLPFEVNENHYPFGYYLADGIYPDWTT
                     LIKGYSTPIEEPRKKFTKFQASARKDVERTFGVLQGRFAILKTPAQVMSVNKMRRIMY
                     SCIVMHNTRR"
     misc_feature    481..1023
                     /gene="LOC139842028"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggattttt tagccttaag tatcgatttg ttattcgatt caacgtcgtc cgaagaagag
       61 gaagaaatcc aaccaagaac ttgttttcaa agacaaccac gacgtttttt aaatagagat
      121 cgtgaagcag cgggtgaatt attgtggaac gattactttt gtgaaaatcc gacgtttccg
      181 gacgacattt tcaagagacg atttcggatg cgcaaagttt tatttctccg tatccgagac
      241 ggtattcttc aacactctta tactcctaat gcccccgatc attttacttt tttccaacaa
      301 cgtccggatg cacttggacg tcttggtttc tcaactattc aaaaaataac ttgcgcgtta
      361 cggcaattgt cgtatgggat gaccgcggat atatttgatg aatatattaa aatggcggaa
      421 aaaacgggtt atgttacttt aaataatttt tgcaagtgta taattgactt atatgggcgg
      481 aaatatttgt ggaagcctaa tgcagctgac attgcttggt tgtattcggc gcacgaggag
      541 aaacatggtt tcaagggaat gttgggtagt attgactgtc aatatacgag aggtgatcac
      601 ggtcacccga cgatcatact tgaagcggtt gcttcatacg atatgtggat atggcatgcg
      661 ttttttggga tggcgggttc aaacaatgac attaatgtgt taaatcattc tccgttgttt
      721 gattcccttc gtaaggatag agtcgcacct ttaccgtttg aagtaaacga aaaccattat
      781 ccctttggtt actacttggc ggacgggata tatcccgatt ggacaacact aataaagggg
      841 tattcgactc ctattgaaga gcctagaaaa aaatttacta aatttcaagc gagtgctaga
      901 aaggatgttg agcgtacatt tggtgtttta caaggtcggt ttgcgatttt aaaaacaccg
      961 gcacaagtta tgagtgttaa taagatgaga aggataatgt atagttgtat tgttatgcac
     1021 aatacaagaa gataa
//
LOCUS       XM_071832208             609 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842029), mRNA.
ACCESSION   XM_071832208
VERSION     XM_071832208.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..609
                     /gene="LOC139842029"
                     /note="uncharacterized LOC139842029; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842029"
     CDS             1..609
                     /gene="LOC139842029"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688309.1"
                     /db_xref="GeneID:139842029"
                     /translation="MSVTFIINEETFTVISAYAPHVGLGEAEKKSFWELLDEVVRNEE
                     GRSILEFAIAHDLVVANSFFKKRDAQLATFHSGGHSTQIDVFLLRRGDLRNCKDCKVL
                     PTWTCLSQHRLLVMELGTQGRVNRRAREVQQPRILWKNLNGEKAETFRANVVERMGAE
                     LENAAFIDADQMWNNLASTIRGVAKESLGVAVGTSRAQNGCR"
     misc_feature    <1..354
                     /gene="LOC139842029"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgtcggtta cgtttataat taatgaggag acgttcacgg tcattagcgc ttacgcaccc
       61 cacgtaggtt taggagaagc ggagaagaag agtttctggg aattgttaga tgaggttgta
      121 agaaatgaag aagggcgctc aattctcgag ttcgccattg cccatgatct ggttgttgca
      181 aactctttct tcaagaagag ggatgctcag ctagccacct tccatagtgg gggtcatagt
      241 acccaaattg acgttttcct tcttcgcagg ggtgacctta ggaactgtaa ggactgtaag
      301 gtcctcccaa cctggacttg tttatcccag catagactgt tggtcatgga gttaggtacc
      361 cagggacggg taaacaggag ggcgagagag gtacaacaac ccagaatcct ctggaagaac
      421 ttaaatggag agaaggcgga gacttttagg gctaatgttg ttgaaagaat gggtgctgaa
      481 ttggaaaatg cagcctttat tgatgcagat cagatgtgga acaacctagc gtccactatt
      541 agaggggtgg caaaagaatc cttgggagtg gcagttggga cgtcgagagc ccaaaatggt
      601 tgtagataa
//
LOCUS       XM_071832209            1086 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842030), mRNA.
ACCESSION   XM_071832209
VERSION     XM_071832209.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1086
                     /gene="LOC139842030"
                     /note="uncharacterized LOC139842030; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842030"
     CDS             1..1086
                     /gene="LOC139842030"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688310.1"
                     /db_xref="GeneID:139842030"
                     /translation="MDRLGDDVLFCIFIKLNEKRDQKSFHQVSKQLMKVACRRLRYLQ
                     SFVPHLLYDILPQSSNLVRFASFNKPLNNSHLKLLAQSCLKLSYLHLGYPVRNFERDF
                     DDDGLCALANSCKNLRHVQVNYRLNFGDPGTMSLVRSCSKNLTTLVLSGCVKITDESL
                     KVIGEECLYLQKLVLRGCSMITDLGLKYLVNGDLKYDLRILDLSRCDKISDDGIRCLT
                     KIVKLDSLNLSRCGNHVTDSGIVDLLVSQQSNIWSLNLSGLMNISDMSLAVMGTKCLK
                     LKYVYMNSCEAITSQGLHAFANHPTLQLLSLFSCHNLTWEDVKSVALSCSSLACLTLS
                     SRLKTSKPADYVYEINHYYGGKMDGST"
     misc_feature    181..255
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    <235..552
                     /gene="LOC139842030"
                     /note="Antagonist of mitotic exit network protein 1;
                     Region: AMN1; cd09293"
                     /db_xref="CDD:187754"
     misc_feature    256..333
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    349..429
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    <415..969
                     /gene="LOC139842030"
                     /note="Antagonist of mitotic exit network protein 1;
                     Region: AMN1; cd09293"
                     /db_xref="CDD:187754"
     misc_feature    430..507
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    508..585
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    592..666
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    667..750
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    751..828
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    829..903
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    904..981
                     /gene="LOC139842030"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 atggatcgac tcggtgatga tgtgcttttc tgtatcttca taaaactgaa cgaaaaaaga
       61 gatcaaaaat cattccatca agtttccaag caactcatga aagtcgcatg tagacgcttg
      121 cgttatttac aaagcttcgt ccctcatctt ctttacgata tacttccaca atcttcgaat
      181 ttggtaagat tcgcttcttt taataaacca cttaataaca gtcatttgaa attactagca
      241 caatcatgcc ttaagctttc ttatctccac ttaggatacc ctgttcgtaa ttttgaacgt
      301 gattttgatg atgatggttt gtgcgcattg gcaaattctt gtaaaaactt gagacacgtg
      361 caagtaaatt acaggttaaa ttttggggat ccaggtacta tgtcgcttgt tagatcatgt
      421 agtaagaatt taacaacttt agttttaagt ggatgtgtga aaataaccga cgaatcactt
      481 aaagttattg gcgaggaatg cttatacttg caaaaattgg ttttgagagg ttgtagtatg
      541 attactgatt tggggttaaa gtatttggtg aacggagatt tgaaatacga tctgcgtatt
      601 cttgatttga gtcgatgtga taagattagt gatgatggta ttagatgttt aacgaaaatc
      661 gttaaattag attccttgaa tttgtcgcga tgtggaaatc atgtcacgga ctctggcatt
      721 gtggacttat tagtgtccca acagtcaaat atttggtcac tgaatttgag tgggttgatg
      781 aacatatcag atatgtcact agctgttatg ggtaccaagt gtttgaaact caagtacgtt
      841 tatatgaaca gttgtgaggc tataacttct caaggtttac atgcttttgc taatcatccg
      901 acactccagt tactttcttt gttctcatgc cacaatttaa catgggaaga tgtaaagtca
      961 gttgcattaa gttgctcatc attggcatgt cttacactca gtagtagatt aaagacgtcg
     1021 aagccagccg attatgtcta cgagatcaat cattattatg gtggcaaaat ggatgggtca
     1081 acttga
//
LOCUS       XM_071832210            1176 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein CHROMOSOME
            TRANSMISSION FIDELITY 7-like (LOC139842031), mRNA.
ACCESSION   XM_071832210
VERSION     XM_071832210.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1176
                     /gene="LOC139842031"
                     /note="protein CHROMOSOME TRANSMISSION FIDELITY 7-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:139842031"
     CDS             106..1176
                     /gene="LOC139842031"
                     /codon_start=1
                     /product="protein CHROMOSOME TRANSMISSION FIDELITY 7-like"
                     /protein_id="XP_071688311.1"
                     /db_xref="GeneID:139842031"
                     /translation="MQSKINSFFKVHSSLKLENQSKNQSDEEHEEEDFTREPEIPIIY
                     TRRASKTLKEDDGVLEGDDPNKSDYGEQLVVGKCNKVLNKKRKYAQFHLDLGQSDFMF
                     RNCKTCGFKFVPGDEEDAKLHKEFHKNYTHGIGFKGWRNERVINTNSLENGRVILVLD
                     DDPPAHMNKVQEVIKMMEMELGDGWIFHKQCKVYLFISSQRVAGCLVAEQIKKAYQLV
                     SKSIAKSDLNTTTKKEGKLTSTTLKFGDISFHREIVRNNKASSKSKTESDDAFLGAIL
                     CEKDAVSAVCGIRAIWVTPSNRRKHVATHLLEATRKSFCLGSILENSQLAFSQPTNAG
                     KLLASSYTNSESFLVYTTSNSL"
     misc_feature    373..492
                     /gene="LOC139842031"
                     /note="zinc-finger of acetyl-transferase ESCO; Region:
                     zf-C2H2_3; pfam13878"
                     /db_xref="CDD:464013"
     misc_feature    949..1155
                     /gene="LOC139842031"
                     /note="ESCO1/2 acetyl-transferase; Region:
                     Acetyltransf_13; pfam13880"
                     /db_xref="CDD:464015"
ORIGIN      
        1 ctcaaaatca cacatctaaa tctcgcatca tagtgcaaaa cgccaccgga atcgtaatct
       61 gaaattcaat ttttacattt aatcagatat agtaaacacc aagatatgca atcgaagata
      121 aactcattct ttaaagttca ttcttcttta aagttggaga atcagtctaa gaatcagtct
      181 gatgaagaac atgaagagga ggactttacc agggaacctg aaataccgat tatatacacg
      241 cgacgagctt cgaaaacact caaggaggat gatggtgtac tcgaaggaga tgatccaaac
      301 aaatctgatt atggagaaca gctagttgtg ggaaagtgta ataaggtttt aaacaagaaa
      361 aggaagtatg cacagtttca tttggatttg ggtcaatctg attttatgtt tcgtaattgt
      421 aaaacttgcg ggttcaagtt tgtgcctggt gacgaagaag atgcaaagct tcacaaagag
      481 tttcataaga attacactca tggtattggg tttaagggtt ggcgtaatga acgagttatc
      541 aacacaaact ctttagaaaa tgggcgtgtt attttggtac tggatgatga tcctcccgct
      601 catatgaata aggttcagga ggtaattaag atgatggaga tggaacttgg tgatggatgg
      661 atttttcata aacagtgtaa ggtatatctt tttatatcct cccagagggt tgctggctgt
      721 ctagttgcag agcaaattaa aaaggcttat caattggtat caaaatcaat tgccaaatct
      781 gatctaaaca ccaccactaa gaaggaagga aagttgactt caaccaccct taaatttggt
      841 gacattagtt tccatcgaga aattgttaga aataataagg cttcatccaa aagtaaaaca
      901 gaatcagatg atgccttcct aggagccatc ttatgtgaaa aagatgcagt gtctgctgtc
      961 tgcggtatac gtgcaatatg ggtcacaccc tccaacagaa gaaagcatgt tgccacacat
     1021 ttactcgagg ctacaaggaa aagtttctgc ctgggttcga tacttgaaaa ctcccagtta
     1081 gcattttctc agccaacaaa tgccgggaag ttattagcat caagttatac caactctgaa
     1141 tctttcttgg tctacacaac tagtaattca ttgtaa
//
LOCUS       XM_071832211             972 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842033), mRNA.
ACCESSION   XM_071832211
VERSION     XM_071832211.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..972
                     /gene="LOC139842033"
                     /note="uncharacterized LOC139842033; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842033"
     CDS             1..972
                     /gene="LOC139842033"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688312.1"
                     /db_xref="GeneID:139842033"
                     /translation="MNNLYLNDYDFEDVMELASAYNPERQLEMLDFLDADEEETYEPI
                     TRAPRRHFPRDRAGRAALLWNDYFSDTPTFLEDKFRRRFRMSSRLFNRISAGILSYSQ
                     EPVPSYFKYFHQRRDATGLLGFTVYQKITSAIRQLAYGVAPDIFDEYLHIGESTSYLC
                     LENYCKSVIHLFSNEYLRKPNASDVERLTRKHEEIHGFSGMLGSLDCMHWAWKNCPVS
                     WKGQYTRGDHGHPTIMLEAGASYDLWIWHAYFGPVGSNNDINVLNQSDLFKELLEDRS
                     PPCNYTVNGLSFTRGYYLADDIYPDWSTLVKLFKSTVEPKLSKFKWY"
     misc_feature    523..>969
                     /gene="LOC139842033"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgaataact tgtatcttaa cgattacgat ttcgaagatg ttatggaact agcaagtgcg
       61 tacaatccag agcgacaact cgaaatgctt gattttttag acgccgacga agaagaaact
      121 tatgaaccta tcacaagagc tccaagaaga cattttccga gagatcgagc tggaagggct
      181 gcactattat ggaatgatta cttttccgac acaccaacat tcctcgaaga taaattccga
      241 agacgttttc gaatgagtag tcgattgttt aaccgtatct ccgcaggcat actcagttat
      301 tctcaagaac cagttccttc atactttaaa tattttcatc aaagacggga tgcaaccggt
      361 ttactcgggt ttactgttta tcaaaaaatt acatcggcta tacgacaatt agcatacggt
      421 gttgctcccg atatttttga cgagtatttg catattggtg aaagcacatc gtatctgtgt
      481 ttagaaaatt attgcaaaag tgttatacat ttattttcga acgaatattt aagaaaaccg
      541 aatgcctccg atgttgaacg tttaactaga aaacatgagg aaatccatgg tttttcgggt
      601 atgctcggta gtctagattg tatgcattgg gcttggaaaa attgtccagt tagctggaaa
      661 gggcaataca cacgaggcga tcatggtcac ccaacaataa tgttggaagc gggcgcctcc
      721 tatgatttat ggatttggca cgcttacttt ggaccggttg gttcaaataa tgacatcaat
      781 gtgttaaacc aatcagattt atttaaagag ttgcttgaag atagatctcc accgtgtaac
      841 tatacggtga atgggttgag ttttacacgg ggctattatt tagcggacga catatatccg
      901 gattggtcga cacttgtgaa attgttcaaa agtacggtcg aaccaaaatt atctaaattc
      961 aaatggtact aa
//
LOCUS       XM_071832212             324 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842034), mRNA.
ACCESSION   XM_071832212
VERSION     XM_071832212.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..324
                     /gene="LOC139842034"
                     /note="uncharacterized LOC139842034; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842034"
     CDS             1..324
                     /gene="LOC139842034"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688313.1"
                     /db_xref="GeneID:139842034"
                     /translation="MATNKLHPAITVSNIKNFIPITLELNTSQYASWAELFKIHCQAF
                     DVLDHIIPSTDDSSSTTPATTNSPTNSADCAKLDAIVLSWIYGTLSNELLLNILSPGS
                     TAQQT"
ORIGIN      
        1 atggccacca acaagctaca ccctgcaatt actgtcagta acatcaagaa ttttattcct
       61 ataacccttg aactcaatac gagccagtat gcctcatggg cagaactatt taaaattcac
      121 tgtcaagctt ttgatgtcct tgatcatatc atcccttcca cagatgattc ctcttctacc
      181 acccctgcca caaccaattc tccaaccaat tcagctgatt gtgcgaaact tgatgccatt
      241 gttctctctt ggatatatgg cacactttca aatgaactcc tgctcaatat cctatctcct
      301 ggttccacag cacaacaaac atga
//
LOCUS       XM_071832213             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139842035), mRNA.
ACCESSION   XM_071832213
VERSION     XM_071832213.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139842035"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842035"
     CDS             1..795
                     /gene="LOC139842035"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071688314.1"
                     /db_xref="GeneID:139842035"
                     /translation="MRSPNAHDVARLYSAHDERHGFRGMLGSIDCMHWEWRNCPVALK
                     GQYTMGDHKKPTLMLEAVASYDLWIWHAFFGMASSNNDINVLNQSPIFDKLKNGTFPS
                     APFEVNGHEHSKGYYHADGIYPDWATLVKGYSCPTEEPTIKFTRFQASARKDVERAFG
                     VLQGRFHIIRLASRSMSVNRMRRVMECCLILHNMILEDNDFALSKWEERFTTEEMENG
                     MERIRNRRRDRDIIAREIRDRDLHNQLTEDLVEHIWNLPPTFRNAN"
     misc_feature    1..594
                     /gene="LOC139842035"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcgatctc cgaatgcaca cgatgttgct agattgtata gtgctcacga tgagagacat
       61 gggtttaggg gtatgctcgg tagtatagat tgtatgcact gggagtggag gaattgtcct
      121 gttgctttaa aaggacaata cactatgggt gatcacaaga aaccgaccct tatgcttgaa
      181 gctgttgctt cttatgactt gtggatttgg catgcttttt ttgggatggc gagttccaac
      241 aatgatatca atgttttgaa ccaatcacct atatttgata aacttaagaa cggaacattt
      301 ccatccgcac catttgaggt aaatgggcat gaacatagca aaggatatta ccatgcggat
      361 ggtatatatc ccgattgggc aactttagtt aaaggatatt catgtcctac tgaagaacca
      421 acgattaagt ttacaagatt tcaagctagt gcccgaaagg atgtagagag ggcatttggg
      481 gttcttcaag gtcgttttca tattatacgc ctagcttcac gaagtatgag cgttaacagg
      541 atgcgaagag tgatggaatg ttgtctcata ttacataaca tgatacttga agataacgac
      601 tttgcacttt ctaaatggga agaaagattc actaccgaag aaatggaaaa tggtatggaa
      661 cgtatacgaa acagaagacg ggatcgagat atcattgcaa gagaaataag ggatcgagat
      721 ttgcacaatc aactcaccga ggatttagtc gagcacattt ggaaccttcc accgactttt
      781 cgcaatgcga attag
//
LOCUS       XM_071832214             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TGACG-sequence-specific
            DNA-binding protein TGA-2.1-like (LOC139842036), mRNA.
ACCESSION   XM_071832214
VERSION     XM_071832214.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139842036"
                     /note="TGACG-sequence-specific DNA-binding protein
                     TGA-2.1-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 47 Proteins"
                     /db_xref="GeneID:139842036"
     CDS             1..804
                     /gene="LOC139842036"
                     /codon_start=1
                     /product="TGACG-sequence-specific DNA-binding protein
                     TGA-2.1-like"
                     /protein_id="XP_071688315.1"
                     /db_xref="GeneID:139842036"
                     /translation="MDDASDKKEKKKVLNREAVKRCRSNQQTYMRNLELKVTELNKEI
                     QLKNEQLKEIKCYHMFIAYPINFNKQFNDWFTEPRQRIMQLRRRLIGEFIEADIFSIV
                     DNTLSHFYTIFNIKKNASKNHVFTIIYGSWMTPAQRCTMWIGGIRPTDMLKLIKNHIE
                     LFGTIEMESLSTNISKQQNELTSKQDFVNKGDEAAMTNYLSSMSSLVEKLTIMHDFMS
                     EADVLRHKTLSSIHKILKTRQRVLALFTIHDHIKRLTTLSDMFESTTTI"
     misc_feature    16..159
                     /gene="LOC139842036"
                     /note="basic region leucin zipper; Region: BRLZ;
                     smart00338"
                     /db_xref="CDD:197664"
     misc_feature    22..165
                     /gene="LOC139842036"
                     /note="coiled coil [structural motif]; Region: coiled
                     coil"
                     /db_xref="CDD:269834"
     misc_feature    order(31..36,40..48,52..69,73..81)
                     /gene="LOC139842036"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     misc_feature    order(76..78,85..90,97..102,106..111,118..120,121..123,
                     130..135,139..144,151..156,160..165)
                     /gene="LOC139842036"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:269834"
     misc_feature    241..465
                     /gene="LOC139842036"
                     /note="Seed dormancy control; Region: DOG1; pfam14144"
                     /db_xref="CDD:464092"
ORIGIN      
        1 atggatgatg cttcagataa gaaagaaaag aaaaaggtcc tcaatcgaga agctgttaag
       61 agatgccgtt caaatcagca gacatacatg cgaaatttgg agttaaaggt tacagaattg
      121 aacaaggaaa tacaattgaa aaacgaacaa ctaaaagaga taaaatgtta tcatatgttt
      181 attgcatatc ctattaactt caacaaacaa tttaatgatt ggtttactga accccgccaa
      241 cgtataatgc aactacgtag acgattaatt ggagaattta ttgaagcaga tattttctca
      301 attgtggata acacattatc acatttctat acgattttta atattaagaa aaatgcgtcg
      361 aaaaatcatg tgtttactat tatctatgga tcttggatga cacctgctca acgatgtaca
      421 atgtggattg ggggaatacg tccaactgat atgttgaagt taatcaaaaa ccacattgag
      481 ctctttggaa ctattgaaat ggagtctttg tcaactaata tctccaaaca acagaatgaa
      541 ctaacttcaa aacaagattt tgtcaacaaa ggtgatgaag ctgcaatgac aaattacctc
      601 agttcaatgt cctctttggt tgaaaagctt actattatgc atgactttat gagtgaggct
      661 gatgttttac gacacaagac tctctcaagt attcacaaaa tactcaaaac aagacaacgt
      721 gttttggcat tattcacaat tcatgatcat atcaaacgat taactacgtt gtctgatatg
      781 ttcgagagta cgacaacgat ttga
//
LOCUS       XM_071832215             435 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842037), mRNA.
ACCESSION   XM_071832215
VERSION     XM_071832215.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..435
                     /gene="LOC139842037"
                     /note="uncharacterized LOC139842037; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842037"
     CDS             1..435
                     /gene="LOC139842037"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688316.1"
                     /db_xref="GeneID:139842037"
                     /translation="MPFPDYQFIQHSCNMLIQDELAYDRYALLNEHESFHSTLTNEQN
                     IAYQTIINAIDKDDSGLFFLYGYGGNGKTFIWKTLVVAVRSRGDIVINVASSEIAALL
                     LTGGRTAHSRVAIPINVVEDSFCSIKPDSELDALLNLAKLII"
     misc_feature    115..>432
                     /gene="LOC139842037"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    202..222
                     /gene="LOC139842037"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgccgttcc ctgattatca atttatacaa cattcatgca atatgctcat tcaagatgag
       61 ttggcttacg acagatatgc tttactaaat gagcatgaat cttttcactc gacgttaact
      121 aacgagcaaa atatagctta ccaaacaata attaatgcaa tcgacaaaga tgacagcgga
      181 ctttttttcc tctatggtta tggaggtaat ggcaagacat ttatttggaa gacgctcgta
      241 gttgctgtac gttctcgtgg tgatatagtt ataaatgttg cttcaagtga aattgcagca
      301 ttacttttaa caggaggtcg aaccgcacac tcaagggttg ccatacctat taacgtagtt
      361 gaagattcat tctgttccat aaaacctgat agcgagcttg atgcattgtt gaaccttgca
      421 aagttaatca tatag
//
LOCUS       XM_071832216            1668 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842038), mRNA.
ACCESSION   XM_071832216
VERSION     XM_071832216.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1668
                     /gene="LOC139842038"
                     /note="uncharacterized LOC139842038; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842038"
     CDS             1..1668
                     /gene="LOC139842038"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688317.1"
                     /db_xref="GeneID:139842038"
                     /translation="MNSSEPIRLKIIGGRDKNGRTHNLPTANEVAALIIGDIDGTSDG
                     RDIIVETCCKTLQRISELHPSYLTLQYPLLFPYAEDGYRTDIYHKGVEIEDASGHAKL
                     TIREFFAYRLQFRENETSLLLILRTLLQQFLVDAYTMVENTRLNYLRNNQKKLRCEQV
                     SSLYDALESGEYNVSVMGTRIILPSSYTGGPRYMKQNYLDAMAIVGAYGYPTIFITFT
                     CNPKWPEILRYLEPLGLKPEDMPDISSRVFKIKLDCLINQIRDGTLFGNLIGELYVIE
                     FQKRGLPHVHICLFLEKMYRVPNVNDIDDLICAEIPNKDEEPELYQLVSDFMMHGPCG
                     PEHPKMPCMKLKKCSKHFPKDLTAETHFYPEGFPLYRRRDDGNFIRKSGTRLDNRHVV
                     GYNKTLLKQYQAHINVKWCNQLRSIKYLFKYINKGPDRIFVGCRYISSCEDAWQLFEY
                     EIIHRTPAVYRLSFHLPDQQPIRFDAESILELVLSKPSVRASQFIEWMTRNRNDPAAR
                     HDSCPDRVWNETCDLLSDDLKHECPEQLRSSARSRNFEEDTAQHCSR"
     misc_feature    412..861
                     /gene="LOC139842038"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgaactcat ctgaacctat acgtcttaag ataataggcg gtagagacaa aaatggacgt
       61 acacacaatc tcccaactgc aaatgaggtt gctgccctca ttataggtga tattgatggt
      121 acatcagatg gcagagacat tatcgttgaa acttgctgta aaactttaca gcgtataagt
      181 gagctacatc cttcttatct tacactacaa tatcctttgc tatttccata tgctgaagat
      241 ggttacagga ctgacatcta tcataagggt gtagaaattg aagatgcatc tggtcatgca
      301 aagctaacta tacgagagtt ctttgcttat cgtcttcaat ttagagaaaa tgaaacttcg
      361 ttgttattaa ttttgaggac acttttacag cagtttcttg tagatgctta tactatggtt
      421 gaaaatacaa gactgaacta cttacgtaac aatcagaaga aattaagatg tgaacaagtt
      481 tcaagcctgt atgatgcgct ggaatccgga gaatataatg tttcggtcat gggaacgcga
      541 ataatactcc catcttctta tactggtgga cctaggtata tgaaacaaaa ttatcttgat
      601 gcgatggcca ttgttggagc ttacggttat ccaaccattt tcattacctt tacctgcaat
      661 cctaaatggc cagaaatact taggtatctt gagccactag gcttgaaacc tgaagacatg
      721 ccagatatca gctcaagggt atttaagatt aaattggatt gcctaattaa tcagattaga
      781 gatggaacgt tgtttggcaa tttgatagga gagttgtacg taatcgaatt tcagaaaaga
      841 ggtcttccac acgtacatat atgcttattc ttagaaaaaa tgtacagagt acccaatgta
      901 aacgatatag atgatttaat atgtgctgaa atacccaata aagatgagga accagaacta
      961 taccagcttg tctcggattt tatgatgcat ggtccgtgtg gtccggagca ccctaaaatg
     1021 ccatgtatga aactaaaaaa atgctcaaag cattttccaa aagatttaac cgcagagact
     1081 cacttttacc ctgaaggttt tccattgtat agaagacggg atgatggaaa ctttattagg
     1141 aagtctggca cgagactaga caacaggcat gtggttggct acaacaaaac tctcttgaaa
     1201 cagtatcaag ctcatatcaa tgtcaagtgg tgtaatcagt tgagatccat aaaatactta
     1261 ttcaaataca taaacaaggg cccggatcga atatttgttg gctgccgtta tatttcatca
     1321 tgtgaagatg catggcagtt gtttgaatat gagattatac acaggacacc tgcagtttac
     1381 cgactttcct ttcacttacc cgaccaacaa cctatacgtt ttgatgcaga atctattttg
     1441 gagcttgtac tttcaaaacc atctgttaga gcatcacaat ttattgagtg gatgactcga
     1501 aacaggaatg atcctgcggc acgacatgat tcatgcccag atcgtgtatg gaacgaaact
     1561 tgtgatctac tttcagatga tttaaagcat gagtgccctg aacaactacg atcgagtgct
     1621 agatccagaa actttgagga agacactgca caacattgct ctcgctaa
//
LOCUS       XM_071832217            1389 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842039), mRNA.
ACCESSION   XM_071832217
VERSION     XM_071832217.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1389
                     /gene="LOC139842039"
                     /note="uncharacterized LOC139842039; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842039"
     CDS             1..1389
                     /gene="LOC139842039"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688318.1"
                     /db_xref="GeneID:139842039"
                     /translation="MSNVVREVVPEVVPEVVPFTPLNMITQERSDWKVRVKVLDQWKK
                     TWFGRPDSILSYEFILADFQGNKIRATVFKNYMDFFAHSFKEGFYVDLSNFEVKVHDD
                     EYKLVDHEFKISMFKKSLVKVINIKVDKESEDDKKSIDFELADISGERVRCKLWGSYA
                     ENLYKSLSINFKKDVDVLLMLHNCRMKDWEGPQINNQLWGFKFFLNDPVQPIIDFKEA
                     LANAIQSNVNYVKPFVEIDLGKDETSVLDKYTDQKKYPIHVLDDVRQVDEVCTFVVRG
                     FLNSFNDNEGWFQYYCNNCDKNKVVKVFDVDERKFVYDCRVCRITSDDANKKIRASIY
                     VQDKTGGCELALFDGQLSKMIHHPTDFLVEFNRVHMKKFAFMVKHKLYGEESKLSGYT
                     VSDLTDNADLLKKIDAILVAKEETPCSTSQTPGSNGSKITTPSSSAENETPTGGTTDA
                     LGDLKIPKMEKL"
     misc_feature    97..363
                     /gene="LOC139842039"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(97..99,265..267,271..273,277..279,358..360)
                     /gene="LOC139842039"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239926"
     misc_feature    order(112..120,169..180,184..186,205..213,217..219,
                     262..264,286..294,334..342)
                     /gene="LOC139842039"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
     misc_feature    358..657
                     /gene="LOC139842039"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(358..366,418..429,433..435,454..462,466..468,
                     523..525,553..561,580..588)
                     /gene="LOC139842039"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    838..1221
                     /gene="LOC139842039"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(838..843,994..1005,1009..1011,1027..1035,1039..1041,
                     1111..1113,1132..1140,1165..1167,1171..1176)
                     /gene="LOC139842039"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(1114..1116,1120..1122,1126..1128,1189..1191)
                     /gene="LOC139842039"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atgtccaacg ttgttcgaga agttgtacca gaagttgtgc ccgaagttgt accattcacc
       61 ccactgaaca tgataactca agaaaggagt gattggaaag taagagtgaa ggtcctagac
      121 caatggaaga aaacatggtt cggcaggcca gactcaatct tgtcgtatga attcattctt
      181 gctgatttcc agggcaataa gatccgagct acggttttta aaaattatat ggattttttt
      241 gctcactcat tcaaagaagg tttttatgtt gatttgagca actttgaggt taaggtccac
      301 gatgatgaat acaagttggt ggaccatgag tttaagatct ctatgtttaa gaaaagcttg
      361 gtcaaggtga tcaacataaa agtggataag gagtcagaag atgacaagaa atcaattgat
      421 tttgaattgg ccgacatcag tggtgaaaga gttcgatgta agctatgggg ttcgtatgca
      481 gaaaatctgt acaagtcttt gtccattaat tttaagaagg atgttgatgt gctactaatg
      541 ttgcataact gtcggatgaa ggactgggaa ggtcctcaaa taaacaatca attgtggggc
      601 ttcaaattct tcttgaatga tccagttcaa ccaattattg attttaagga ggcgttagcc
      661 aatgctattc aatcgaatgt aaattatgtc aagccttttg tcgaaatcga tcttggtaag
      721 gatgagacat cggtactgga taagtataca gaccagaaaa agtatcccat acacgtactt
      781 gatgatgtgc gccaagtaga tgaggtttgc acatttgttg ttagaggctt tcttaacagt
      841 ttcaacgaca atgaaggttg gtttcagtac tattgtaaca attgtgataa gaacaaagtt
      901 gtcaaagtgt tcgatgtgga tgaaagaaaa tttgtttatg attgtcgtgt ttgtagaatt
      961 actagtgatg atgccaacaa aaagattcgt gcatctatct atgttcaaga taaaactggc
     1021 ggatgtgaat tggcactctt tgatggccag ttatcaaaaa tgatacatca tccaactgat
     1081 ttccttgttg agtttaatcg agttcatatg aagaagtttg cttttatggt taagcataag
     1141 ttgtatggcg aggagtcaaa gctgtccggc tacacggttt ccgatttgac tgataatgcg
     1201 gatttgttaa agaagattga tgcaattcta gtggccaagg aggaaacacc ttgttctaca
     1261 agccaaacac caggaagcaa tggaagtaag ataacaactc cttccagctc agcagagaat
     1321 gaaacaccca caggaggtac tacagatgct ttgggtgatc ttaaaattcc aaagatggaa
     1381 aagttgtga
//
LOCUS       XM_071832218            1066 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842040), mRNA.
ACCESSION   XM_071832218
VERSION     XM_071832218.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1066
                     /gene="LOC139842040"
                     /note="uncharacterized LOC139842040; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842040"
     CDS             1..984
                     /gene="LOC139842040"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688319.1"
                     /db_xref="GeneID:139842040"
                     /translation="MESQNEVPKEDKSRVANKDMIAKKEGKKVLTPEPHSKHTKLFKN
                     GSHSSSFSTKPQTTNELSLRRRPGSTGETTSSSARANKNVPGGTNIGTPSDSLRSVNK
                     LKAKKSNADEDGRPFEDSLGRRSSGFSSKSEVRAEKRKEFNSRLEEKSREKEMERTNL
                     QEKSKESQKAEIRDLRKNLGFKATPLPKFYNEPATKWEPKKKQPTRPITPKLGKNRSV
                     RSGGQQVKNEATSSKVDRASKTEAGPEQPKELPLKSKGQEVENELPVGSRDQEMDQGS
                     VETFEKIEFPLDNQLEDEGWEEVNNEEDPEIEEGPLHSTNLADRGYIDNYF"
     misc_feature    382..618
                     /gene="LOC139842040"
                     /note="Targeting protein for Xklp2 (TPX2) domain; Region:
                     TPX2; pfam06886"
                     /db_xref="CDD:462029"
ORIGIN      
        1 atggagtctc aaaatgaagt tccaaaagaa gataaatctc gtgttgctaa taaagatatg
       61 attgcgaaaa aagagggaaa aaaggttctt actccagaac cacattcaaa gcacactaag
      121 ttatttaaaa atgggtctca cagttcctca ttttcgacta aaccccaaac tactaatgag
      181 ctgtcgttga gacgaagacc tgggtctacg ggtgaaacca catcatcctc tgcacgtgcg
      241 aataagaatg tgccaggtgg tacaaatatt ggcacccctt cagattcgct gcgaagtgtg
      301 aacaaattaa aggctaagaa atcgaatgca gatgaagatg gccgtccttt tgaggattcc
      361 cttgggcgac gtagttctgg cttttcttcc aaatcggaag tacgtgctga aaagagaaag
      421 gaatttaatt ctcggttaga ggaaaaaagt cgtgaaaagg aaatggaaag gacgaatttg
      481 caagaaaaat ctaaagaaag ccagaaagca gaaatcagag atttaaggaa aaatttgggg
      541 tttaaagcta caccattgcc aaagttttac aacgaacctg ctaccaagtg ggaaccaaag
      601 aagaaacaac ccactcgccc gataactcca aagctaggca aaaatagaag tgtgcgttct
      661 gggggccaac aagttaaaaa cgaagctaca tcaagtaagg tcgatcgcgc tagcaaaaca
      721 gaagccggac ccgaacagcc aaaagaatta cctcttaaat caaaaggtca agaagtcgaa
      781 aatgagttac ctgttggttc acgagatcaa gaaatggacc aaggttctgt tgaaacgttt
      841 gaaaaaatcg agttcccact agacaatcaa cttgaagatg aaggttggga agaagttaat
      901 aatgaagagg atccagaaat cgaggaagga cctcttcata gtacgaatct tgcagacaga
      961 ggttacattg ataattactt ttgataaggt tctctacagg tttgtaaaat tttttatttt
     1021 ttggaaagtt tgaatttgat catgtatgta atacacgaat aagaac
//
LOCUS       XM_071832219             921 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842041), mRNA.
ACCESSION   XM_071832219
VERSION     XM_071832219.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..921
                     /gene="LOC139842041"
                     /note="uncharacterized LOC139842041; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842041"
     CDS             1..921
                     /gene="LOC139842041"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688320.1"
                     /db_xref="GeneID:139842041"
                     /translation="MYKRGNINTIIVNVYGPHKDVKKKDFWESLENLLRFVNEDWVLC
                     GNFNDVRSEFERRNCVLDPRRAALFNEFINNAKLIEIPLVGKQFTKICDRGMKFSKLD
                     RFLVTEQFLNRRGDVFVTAFERKDTDHCPLAMKNKWVDFGPKPTRIFDEWLDHPEAGN
                     IIHDAWNVPIEINRDDLIFCRNLKAVRMAHKNWSKNLFGKIDSEIEEYKKLAASFELK
                     AETNDLSEAERLQWMDICGQWFKKEAQKLNMMKQKSRFKWVSEGEENIKFFHSFIKRR
                     NCKNNICGIYVNDTWEEDSEAVKAEIFDFF"
     misc_feature    <16..405
                     /gene="LOC139842041"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(43..45,142..144,385..387)
                     /gene="LOC139842041"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtataaac gaggcaatat caatacaatt atagtaaacg tgtatggacc gcataaagat
       61 gtcaaaaaga aggatttctg ggaaagtttg gaaaatttgt tgaggtttgt aaacgaagat
      121 tgggtcttgt gtggaaactt taacgacgtc aggagtgaat tcgaaaggcg taattgcgtg
      181 cttgatccta gaagggcagc gttattcaat gagttcatca acaatgcaaa actcattgag
      241 attcctctag tgggtaaaca attcacgaaa atatgtgaca ggggtatgaa atttagtaaa
      301 ctcgatcgct tcttggttac cgagcaattt ttaaatcgac gtggagatgt tttcgtcaca
      361 gcctttgaac gaaaggatac tgatcactgt ccactggcaa tgaagaacaa gtgggtcgat
      421 tttggcccga aacccacaag aattttcgat gaatggttag atcatccgga agctggaaac
      481 attattcatg atgcctggaa cgttccaatc gagattaaca gggacgattt aatattctgc
      541 aggaatctaa aggcggtcag aatggctcac aaaaattgga gcaaaaattt gtttgggaaa
      601 atagactctg agatcgaaga atataaaaaa ttggcagcga gttttgagct taaagctgaa
      661 acgaacgact tgagtgaggc agagagattg cagtggatgg atatatgtgg tcaatggttt
      721 aaaaaggaag cacaaaaatt aaacatgatg aagcagaagt cgagattcaa atgggtttcg
      781 gagggggagg aaaacatcaa atttttccac tcgtttatta aaaggcgtaa ttgtaaaaac
      841 aatatttgcg ggatttacgt caatgacact tgggaggagg attcagaggc agttaaagct
      901 gagatattcg atttttttta a
//
LOCUS       XM_071832220             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842042), mRNA.
ACCESSION   XM_071832220
VERSION     XM_071832220.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139842042"
                     /note="uncharacterized LOC139842042; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842042"
     CDS             1..588
                     /gene="LOC139842042"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688321.1"
                     /db_xref="GeneID:139842042"
                     /translation="MSAIIDKCFLGEASGHGHTMINKLVPKSLGIFVWRAIRGRLPVR
                     LELDKRGIDLDSVRCPVCDTTLESVELILLRCNLANDVWNLVRRWWNCNDSIVTTGLI
                     PLFNLEKRHNWSHDGNMVWQAVRWVAGYCIWKYSNDKVFKNISKSSADIFNDIQVKSF
                     EWVSKRAKNRSFMWHIWLLDPSFYGNSGLSRTGIG"
     misc_feature    <64..246
                     /gene="LOC139842042"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtcagcta taattgataa atgctttttg ggtgaagcta gtggtcatgg gcatactatg
       61 atcaataaac tcgtcccaaa atctttaggc attttcgttt ggcgggcgat tcggggtagg
      121 cttccggttc ggctcgaact cgacaagagg ggaattgacc tcgactcggt tcgatgcccg
      181 gtctgcgata ctaccttaga gtcagtcgaa cttattttac ttaggtgtaa cttagcgaat
      241 gatgtttgga atctcgttag gcgttggtgg aattgcaatg actctatagt tacaacaggc
      301 ttaattcctc tttttaatct agagaaaaga cataattggt cgcatgatgg gaatatggtt
      361 tggcaagcgg ttagatgggt agctggttat tgcatttgga aatatagtaa cgataaagtt
      421 ttcaagaaca tctctaaatc gagtgcggat atcttcaatg acatacaagt caagagtttc
      481 gagtgggtct cgaaaagggc aaagaatcgt tcgtttatgt ggcatatatg gctactagat
      541 cctagtttct acggtaactc gggtttatca agaactggga tcggctaa
//
LOCUS       XM_071832221            4673 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides TMV resistance protein
            N-like (LOC139842043), mRNA.
ACCESSION   XM_071832221
VERSION     XM_071832221.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4673
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4673
                     /gene="LOC139842043"
                     /note="TMV resistance protein N-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842043"
     CDS             1..4662
                     /gene="LOC139842043"
                     /codon_start=1
                     /product="TMV resistance protein N-like"
                     /protein_id="XP_071688322.1"
                     /db_xref="GeneID:139842043"
                     /translation="MAEVPADEVNTVSNDRSLTSQWNQRLGHMSDKGMKMLVSNGKIP
                     GLKRVESDFCESCVLGKKKKVTFAKAGRTLKAQKLELVHTDVAYDINKDGDKLDAKAK
                     KYVFIGYGGDDMGYRLWDNKGKHVIRSKHPTFNEAELYKDFNSTTKEKESVEFEVDTE
                     TTREDERETPEDETEVPVGVPNSESSESDHEQTSDSGSSESDDEQTPQSPPQSDQSNW
                     VRRSTRVTRQPVRFSPTVNYLLLTENGEPESYSEAMKVKDSFQWEQAMKSEMESLLKN
                     QTWRLTKLPPGKRVLQNKWVFRVKDEGDVVKMTTIRLVLSMVATEKLHLEQLDVKTAF
                     LHGDIEEDIYMSQPEGFRVKGKESLVCNLKRSLNIEEKAGTRERRDELGLALQKYKSA
                     DRLSTVETMSYESSSASSSIRVSKGYDVFLSFRGEDTRTASNSFTSHLYDALIRKCIR
                     TYQDDKSLEIGNVIAPELLRAIEASKFAIVVLSPNFATSKWCLEEIVNIVNCMELGKL
                     VVIPVFYHVSPTDVCHQSDCYVQCFTNHEQNPEIPPQKVETWKAAFKKLGAISGLHVT
                     QDRKESEVVNEIVKKILTDMQALVPKSLPDGLVGIESRLNEVKKILIMESSDVRFIRI
                     CGMSGVGKTTLAEVVYEAVQMEFQESSFIENIKDISKERNTDLCKLQQKLLDDILKGE
                     SVPVKTVRHGQTLLKTKLRDLKVIIVLDDVNHADQLTYLAGGRECFGNGSRVIITTTN
                     TDLLNPHRINATYVCEELEDDEALNLFCQSAFGGHPTKRYENLSKDIVKLACGLPLAL
                     NAYGSLLRTKEESYWKEFLNKLQENAHEEVFGRDTFRYIACFLKGRDKNLVKDILTDI
                     GLYPECGITDLINKFLITLNHDDSVWMHDLLQQMCWEILRKDSERDYGKYVAIKRRQD
                     IVDILSSKPKGMRVIEIINQEPYKAEEEVCFDDPTCFSKMTKLRFLRISNIRFSQGLN
                     YLSNDLRILEWYRCSLKSFPSTFAPKHIFELDMRCSHLETLWEKDLDLPNLRSVNLSF
                     SPNLIKIPNLTSTPKLRVLNLEGCVKLRALHESVLVHKRLRYMNLKGCGLLESLGGCN
                     MEMDALEALHLSGCCNLKYIPEFGLNMKCLEHLYVDGTNVKKLPESLGKMCNLRKFDV
                     SETSIEEIPSSIYQLKRLRFLRVHRCMLLSHNRGFLYTNLDTVSYIREVDLSYCNLSA
                     VPEGIGLLCRIVKLDLSGNDFVLLPASISLLSNLKLLNLNNCKRLQSLPKLSIVNEET
                     LYGLEIRFNYYISGEAVDFSRFHASSDNGSPTVSCLNCPRLAENESGRYLVDKILNSY
                     LQLRTKYWITPAAVFEIVGTGSKIPSSFKLMTSGENVILEGPWIGVAICAVIAVHQIV
                     VFMDANYTVTVHIHVGEKHWMIPVPINFLMARVENQLVVYWTVTDDYQRIVDLTQQNN
                     FRFSFSVGPGDGNVEVTKFGVRFIREGDTFEPKRHEDSTSMVALQEVQGYIRACEADI
                     DRCPRHSAIHDHTIMTTKFLHDYGKQQYSLDDIHKILKCVTEITQQVFGEYKEEWRHS
                     E"
     misc_feature    7..183
                     /gene="LOC139842043"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    826..>1101
                     /gene="LOC139842043"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    1252..4074
                     /gene="LOC139842043"
                     /note="Resistant to P. syringae 6; Provisional; Region:
                     PLN03210"
                     /db_xref="CDD:215633"
     misc_feature    2869..3066
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3067..3135
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3136..3207
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3280..3351
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3352..3420
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3421..3489
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3490..3573
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3574..3642
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    3643..3714
                     /gene="LOC139842043"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      
        1 atggcagaag ttccagctga tgaagtaaat acagtttcca atgatcgaag cttaaccagt
       61 cagtggaacc aacgtttagg tcacatgagt gacaaaggaa tgaaaatgct agtgtctaat
      121 ggtaaaattc ctggtctaaa gagagttgaa tcggactttt gcgagtcatg tgttctagga
      181 aagaagaaga aggtcacctt tgcaaaagca ggcagaactt taaaggctca gaagttggag
      241 ctagtacaca cggatgttgc atatgatatt aataaagatg gtgacaaact tgatgcaaaa
      301 gcaaagaagt acgtgttcat tggttatgga ggagacgaca tgggttacag gttatgggat
      361 aacaagggaa aacatgttat cagaagtaaa catcccacct tcaatgaagc agaattgtac
      421 aaggatttca actcaacaac aaaagaaaaa gaatcagttg aatttgaggt tgacacagag
      481 acaactagag aagatgaaag ggaaactcca gaggatgaaa ctgaagttcc agtgggagtt
      541 cctaacagtg aaagctcgga gtctgatcac gagcagactt cagatagtgg gagctcagag
      601 tctgatgatg agcagacccc acagtcccca ccacaatctg accagtccaa ttgggtcagg
      661 agatctacac gagtcacaag acagccagtt aggtttagcc caacagttaa ctatcttctt
      721 ttgacagaaa atggggaacc agaaagttat tctgaggcaa tgaaggtgaa agattcgttc
      781 cagtgggagc aggctatgaa aagcgagatg gaatctttat tgaaaaatca aacttggagg
      841 ttaaccaagt taccaccagg aaaaagggtc ttacagaata aatgggtttt cagagtcaaa
      901 gatgaagggg atgtagtgaa gatgacgact atcagattgg ttctaagtat ggttgcaacc
      961 gagaagttac acttagaaca gttggatgtt aaaacagcct tcctgcatgg cgacattgaa
     1021 gaagacattt acatgtctca accagagggg tttcgtgtca aaggaaagga gagtcttgtg
     1081 tgtaatctaa agagaagctt gaacattgaa gagaaggcag gaactagaga gagaagagac
     1141 gagctaggtc ttgcattgca gaagtacaag agtgcagatc gattatcaac tgtagagacg
     1201 atgtcgtatg aatcatcatc agcatcatct tcaataagag tttcaaaagg ttatgatgtt
     1261 tttttaagct ttcgagggga ggacactcgt actgcttcca acagtttcac tagccatttg
     1321 tacgatgctt taatccgaaa atgcattaga acctaccaag atgataagtc acttgaaatt
     1381 gggaatgtta ttgctcctga gctcctacgg gctatagaag catcaaaatt tgccatagtg
     1441 gttttatcgc ccaattttgc aacatcaaaa tggtgtttgg aggaaattgt taatattgtt
     1501 aattgtatgg agctaggcaa gctggttgtt attcctgttt tttaccatgt gtctcccacg
     1561 gatgtatgcc atcagagcga ctgttacgta caatgcttca ctaatcatga acaaaatcct
     1621 gaaattccac ctcagaaggt ggaaacgtgg aaagcggctt tcaaaaagtt gggggctatc
     1681 tcgggactgc acgtgacaca agataggaaa gaatcagaag ttgtaaatga aattgtaaag
     1741 aaaatcctta cggacatgca agctctggta ccaaagtctc ttcctgatgg tctggtggga
     1801 attgaatcac gattaaatga ggtgaagaaa attctgatta tggaatcttc tgacgttcgt
     1861 tttataagga tttgcgggat gagtggagtt gggaagacta ctcttgctga agttgtctat
     1921 gaggcagttc aaatggaatt tcaagaaagt agctttattg aaaacatcaa agatatttct
     1981 aaggaacgta atacagattt atgcaagctc cagcaaaaac tccttgatga tattttgaaa
     2041 ggggaaagtg tacctgtaaa aactgttagg catggccaaa ctttgttgaa gaccaagcta
     2101 cgtgatttga aggttataat tgtgttggat gatgtaaatc atgcagacca attaacttat
     2161 ttggctggtg ggcgtgaatg ttttggaaat ggcagcagag ttattataac cacaacaaac
     2221 acagacttgc tgaatccaca tagaataaat gcaacatatg tatgtgaaga attggaagat
     2281 gatgaagctc ttaatctctt ttgtcagtca gcatttggag gacatcctac aaaacgttat
     2341 gagaacttgt cgaaagatat tgtgaagctt gcttgtggtc ttccattagc tcttaatgct
     2401 tacggttctc tattacgtac caaagaagaa agttattgga aagagttttt gaacaaattg
     2461 caagaaaatg cacatgaaga agtgtttgga agagatacat tcagatatat cgcgtgtttc
     2521 ttgaaaggga gagacaaaaa tttggtaaag gatatactaa cagatattgg tttgtatcct
     2581 gagtgcggaa tcactgatct catcaacaag tttcttataa ctttaaatca tgatgatagt
     2641 gtttggatgc atgatcttct ccaacaaatg tgttgggaaa ttcttcgtaa ggactcggag
     2701 agagactatg gaaagtacgt tgcaattaag cgtcgccaag atattgtaga tatcctctca
     2761 tccaaaccaa aggggatgag agtaattgaa atcattaacc aggagccata taaggctgaa
     2821 gaggaagttt gctttgatga tcctacatgt ttctcaaaga tgacgaaact cagatttctc
     2881 aggattagta atatacgatt ctctcaaggt cttaactatc tttccaatga tctacggatt
     2941 ctggaatggt atagatgttc tttgaagtcc tttccttcaa cttttgcacc caaacacatt
     3001 tttgaacttg atatgcgttg tagccatctt gaaacacttt gggagaaaga tctggatctg
     3061 cctaatttga gatccgttaa cctcagtttc tctccgaatt tgatcaaaat tccaaacttg
     3121 acatcaaccc cgaaactacg tgtattaaat cttgaaggct gcgtgaaact cagagcgcta
     3181 catgaatcgg ttcttgttca taaaaggcta cgatacatga atctgaaagg gtgtgggctt
     3241 cttgaaagcc ttggtggatg caatatggaa atggacgctc tcgaggcact acatttatct
     3301 ggctgctgta atctcaagta tattcctgaa tttggactga acatgaaatg cttggagcat
     3361 ctgtatgttg atggaaccaa cgtcaagaaa ttgccagaaa gtttggggaa gatgtgtaat
     3421 ttgagaaaat ttgatgtgag tgaaacttca atagaagaga taccctcttc catatatcag
     3481 ctgaagaggt taagattcct acgtgttcat agatgcatgc ttttatccca caacagaggt
     3541 tttctgtata caaatctgga tacagtatcg tatatacgag aagttgatct aagttactgt
     3601 aatctatcgg cagttcctga gggtattggt ttgttatgcc gcatagtaaa gttggatctt
     3661 tccggaaatg attttgtttt actgccagca agtatcagtc tcctttcaaa tcttaaattg
     3721 cttaatctga ataactgcaa gaggcttcag tcattaccga agctttccat agtaaatgag
     3781 gagacgctct atggacttga gatcagattt aattactata tttcaggaga agcggtagac
     3841 ttttctaggt ttcatgcctc aagcgacaat ggtagtccaa cggtgtcatg tttgaactgc
     3901 cctagactgg ctgagaacga aagcggtcgt tatctggtgg acaaaatatt aaatagttat
     3961 cttcagttac gaacgaaata ctggattaca ccagcagcag tatttgagat agttggcaca
     4021 ggaagcaaga ttccatcaag cttcaagcta atgacatctg gcgaaaatgt gattcttgaa
     4081 ggcccatgga ttggggtggc tatatgtgct gttattgctg tccaccaaat tgttgttttt
     4141 atggacgcca attacacggt aacagttcat atccatgttg gggaaaaaca ttggatgatt
     4201 ccagttccca taaacttttt gatggcaagg gtggagaacc aattggtagt ctactggaca
     4261 gttactgatg actatcaaag aattgtagat ttgacccaac aaaataactt ccgattctca
     4321 tttagcgtgg ggccaggaga tggtaatgtg gaggttacaa agtttggagt tcgttttata
     4381 cgtgagggag acacatttga accgaaacga catgaagatt ctactagtat ggtggcactc
     4441 caagaagtgc aagggtatat acgtgcttgt gaagctgata ttgaccgctg tccccgtcat
     4501 tcggccatcc acgaccacac catcatgacg acaaaattcc ttcacgacta tggaaaacaa
     4561 caatattcct tggatgacat ccataaaatc cttaaatgtg taacagaaat cacccaacaa
     4621 gtttttggtg aatacaagga agagtggaga cactcagagt gagttacatt ggt
//
LOCUS       XM_071832222             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842044), mRNA.
ACCESSION   XM_071832222
VERSION     XM_071832222.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139842044"
                     /note="uncharacterized LOC139842044; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842044"
     CDS             1..603
                     /gene="LOC139842044"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688323.1"
                     /db_xref="GeneID:139842044"
                     /translation="MLRAYVLEYGGSWDTHLPLVELAYNNSYHLNIGMPPYEMLYGRR
                     CRTLICWLEVGEKQFAGPKIVQMIAKKVFIAREKCRRGKGVIRFGKHGKLVPRYIGPY
                     PIREILNDKTVVLELPPELAGIHNTFNVCYLRKCKVDDETQVLPIKDLKVDLSNKLVE
                     EPIRMVDRKGGWGFITVPREVAVCMRSTVPREVGSQAADG"
ORIGIN      
        1 atgttacgag catatgtatt agaatatggt ggttcatggg atacacattt accattggtc
       61 gaactcgcct acaataattc gtatcactta aatataggta tgcctcccta cgaaatgtta
      121 tacggtcgtc gttgcagaac tctgatttgt tggttagaag tcggagagaa acagtttgcg
      181 ggtccaaaaa ttgtacaaat gatagctaag aaagttttta tagcaagaga aaagtgtcgt
      241 cgtggaaagg gggttatcag attcggtaaa catggtaagt tagtaccaag gtatattggg
      301 ccatatccaa ttagagagat cttgaatgat aagacagttg tacttgaact tcctcccgag
      361 ttagctggta ttcacaatac gtttaacgtg tgttatctta gaaagtgtaa ggtggacgat
      421 gaaacgcaag ttttgccaat taaggatctt aaagttgatt tgagtaacaa gctggttgag
      481 gaaccgattc ggatggtcga cagaaaggga ggttggggat tcataactgt tcccagggag
      541 gttgcagtct gtatgaggtc aactgttcca agggaggttg ggtctcaagc tgctgatggg
      601 tga
//
LOCUS       XM_071832223             693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842046), mRNA.
ACCESSION   XM_071832223
VERSION     XM_071832223.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..693
                     /gene="LOC139842046"
                     /note="uncharacterized LOC139842046; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842046"
     CDS             1..693
                     /gene="LOC139842046"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688324.1"
                     /db_xref="GeneID:139842046"
                     /translation="MVVVVCSLVGRRRKKGRRNEKRERKEKRRRRKGEENLARVKPSP
                     KLKVYNPLIPYPKAIQSEQSKDTVCKSINTNENICVRVPLPDVLAGMPNYGKFLNNLM
                     AKKGEHKQGSSAFLEAICAAILKKSDMPPKLGDPGPFIVPCRIDDSGIFKCLTNSGAS
                     INFMPLSVYSRLGLNELKSTKIGVRLVNQTVSKPKRIAENLVVKISELEFPADFVVVD
                     MPEDKVVPIILG"
     misc_feature    454..690
                     /gene="LOC139842046"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(466..468,472..474,478..480,550..558,682..684)
                     /gene="LOC139842046"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    466..474
                     /gene="LOC139842046"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    466..468
                     /gene="LOC139842046"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(550..561,571..582)
                     /gene="LOC139842046"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggtggtgg tggtgtgctc actcgtcggc cgaaggagga agaagggaag gagaaatgaa
       61 aaaagagaga ggaaagaaaa gaggaggaga agaaaaggag aagaaaattt ggcccgtgtg
      121 aaaccttcac ctaagctgaa agtttacaat ccgctcattc catatccgaa agctattcaa
      181 tccgagcagt cgaaggacac tgtttgtaag tctattaata ctaatgaaaa tatttgtgtg
      241 cgtgtacctt tgcctgatgt tcttgcaggt atgcccaatt atgggaaatt tttgaataat
      301 ttaatggcga agaagggtga gcataagcag ggatcctccg cgtttcttga agcgatatgt
      361 gctgctattt tgaagaagag tgatatgcca ccaaagttag gtgatcccgg tccattcata
      421 gtgccctgta ggattgatga ctctggaatt tttaagtgtt taactaattc aggtgcgagt
      481 atcaatttta tgccgttatc tgtttattca cgtttgggtt tgaatgagct taagtcgact
      541 aaaattggag ttagattagt taaccagaca gttagtaaac ccaaaaggat tgctgaaaat
      601 ttggtggtta aaataagtga attagagttt ccagcggatt ttgtggttgt tgatatgccg
      661 gaggataagg ttgtacccat tattttaggt tga
//
LOCUS       XM_071832225             417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842047), mRNA.
ACCESSION   XM_071832225
VERSION     XM_071832225.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139842047"
                     /note="uncharacterized LOC139842047; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842047"
     CDS             1..417
                     /gene="LOC139842047"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688326.1"
                     /db_xref="GeneID:139842047"
                     /translation="MDIKYYRLWYSGSRIARNGVGIFLGKLHKDNVVDVGRFSDRTMS
                     VSLYIKEETFTVISAYAPHAGLSDGEKKSFWELLDEVVRRCPADHRLIIGGDLNGHLG
                     AEAEGYEGVHEGFGFGPRNEEGRSILVIFFYKKYPF"
     misc_feature    <13..>375
                     /gene="LOC139842047"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atggatatta agtactatag gttgtggtac tcgggttcta ggatagcacg gaacggggta
       61 ggtatctttt tgggaaaact acataaggat aacgttgttg acgtgggtag gtttagcgat
      121 aggactatgt cggttagtct atatattaag gaggagactt tcacggtcat tagcgcatac
      181 gcacctcacg cgggtttaag tgatggggaa aagaagagtt tttgggaatt gttagatgag
      241 gtagtgagga ggtgcccagc tgaccatcga ctgattatag ggggtgatct gaatggacac
      301 ttaggagcgg aggcagaagg ttacgaggga gtccatgagg gctttgggtt tggtcctaga
      361 aatgaagaag ggcgctcaat tcttgtcatt tttttttata aaaaatatcc cttctag
//
LOCUS       XM_071832226             897 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842048), mRNA.
ACCESSION   XM_071832226
VERSION     XM_071832226.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..897
                     /gene="LOC139842048"
                     /note="uncharacterized LOC139842048; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842048"
     CDS             1..897
                     /gene="LOC139842048"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688327.1"
                     /db_xref="GeneID:139842048"
                     /translation="MKKLIDWKPVIEKFHKRLSDWKARTISFGGRLTLVKSVLNSLPL
                     YYFSIYRAPSCVIKKLECVRRNFYWGGNIDDKKISWVNWEKLLLPYEEGGLNIGSLKG
                     KNLALLGKWRWRFHTEINSLWTKIITSIYGSHGGFDSDDSHRHSPPHGSWFNVINAGK
                     TLDSLAWRLAKVQRCRKDSREMEADVRSHWGWSRSPTGRALGELETLSNLINSFVFDH
                     SETDADSWRWKIAPNGKFTTEVLNETIEGKFNEGRSLHMETERNYLTPKKIEIFIWRA
                     RLRRLAVRVELDKRGVDLHSVL"
ORIGIN      
        1 atgaaaaaat taattgattg gaaaccggta attgaaaagt ttcacaaaag actatcggat
       61 tggaaagcaa ggacgatctc ttttggtgga agattgaccc ttgtgaaatc ggttttgaat
      121 agtcttccgt tgtattattt ctcaatctat cgtgccccgt catgtgttat taaaaaactc
      181 gagtgtgtga ggagaaattt ctattggggt gggaatattg acgataaaaa aatttcgtgg
      241 gttaattggg aaaaattact tttaccttat gaagaaggag gtctaaatat cggatctctc
      301 aaaggcaaaa atttagcctt attagggaaa tggagatggc ggtttcacac cgaaatcaac
      361 tcattatgga ccaagataat caccagcatc tatggttctc atggtgggtt tgatagtgat
      421 gactcccatc gacattcccc tcctcatgga tcgtggttta atgtcatcaa tgcagggaaa
      481 accttggaca gcttagcttg gagacttgca aaagtgcaac ggtgcaggaa agactcacga
      541 gaaatggagg ctgatgttcg ttctcattgg ggctggagca gatcgcctac gggtcgagca
      601 ttaggggagc tggagacttt atctaacttg attaattctt ttgtgtttga tcacagcgag
      661 acagatgcag attcgtggag gtggaaaata gcaccaaacg gaaaattcac aacagaggtc
      721 ctgaatgaaa caatcgaagg aaaattcaat gaaggtcgct cgctacatat ggaaactgaa
      781 cgaaactact tgacaccaaa aaagatcgaa atcttcattt ggagagcaag attgagaaga
      841 ttagcggtac gtgtggaatt ggataaaaga ggtgtggatc tacattcggt tctatga
//
LOCUS       XM_071832227            1049 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            C24B11.05 (LOC139842049), mRNA.
ACCESSION   XM_071832227
VERSION     XM_071832227.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1049
                     /gene="LOC139842049"
                     /note="uncharacterized protein C24B11.05; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins"
                     /db_xref="GeneID:139842049"
     CDS             62..841
                     /gene="LOC139842049"
                     /codon_start=1
                     /product="uncharacterized protein C24B11.05"
                     /protein_id="XP_071688328.1"
                     /db_xref="GeneID:139842049"
                     /translation="MIMETVGSSTAVKYECLLFDMDDTLYPMSLGLNSACRKNIEEYM
                     LKYLNIEESQVPDMCLELYREYGTTMAGLKALSYKFDDDEFHALVHGTLPYHTLKPDL
                     VLRNLLLSMPQRKIIFTNADKAHAARVLSKMCLEDCFEGVICFETLNSHCDDTRFSSP
                     TRVICKPAIESFEAAAIIANIDPNKTIFFDDSVRNIATAKSAGFHTVIVGRSSLVPGA
                     DQALNLIHNIKEALPELWANEGEHLEQAFIHPVAVETAVNA"
     misc_feature    104..688
                     /gene="LOC139842049"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; Region: Haloacid Dehalogenase-like Hydrolases;
                     cl21460"
                     /db_xref="CDD:473868"
     misc_feature    order(119..133,416..421,557..559,629..634,641..646)
                     /gene="LOC139842049"
                     /note="active site"
                     /db_xref="CDD:319763"
ORIGIN      
        1 tcgagtcatt gttttcaact ccataagaaa agagttggcc ttcgttgaaa gttgtttgtt
       61 gatgatcatg gaaacagtgg gatcatccac ggcagtcaag tacgagtgct tgctttttga
      121 tatggatgat acgctgtatc ctatgagctt gggtcttaat tctgcttgtc gcaaaaatat
      181 tgaagaatac atgttgaaat atttgaatat agaagaatct caagtccctg atatgtgctt
      241 ggaattgtac agagaatacg ggacaaccat ggctggtctc aaggctctta gttacaagtt
      301 tgatgacgat gaatttcatg ctttggttca tgggacctta ccttaccata ctctcaaacc
      361 cgatttggtt ctaagaaacc ttcttctatc tatgccacaa cgaaaaatta ttttcacaaa
      421 tgcggacaaa gcacatgcag ctcgagtcct cagtaaaatg tgcttggaag actgtttcga
      481 aggtgttata tgctttgaga cgcttaatag tcattgcgat gacactaggt tcagctctcc
      541 aacaagagtc atctgcaaac cagcaattga atcattcgaa gcggctgcta tcatcgccaa
      601 tattgacccc aacaaaacta tcttcttcga tgacagcgtt agaaacattg ccactgcaaa
      661 gtctgcagga tttcatacgg tcattgtagg aaggtcgagt cttgtcccag gagcagatca
      721 agctttaaac ctcatccaca atattaaaga agcactacct gagttatggg cgaacgaagg
      781 tgaacatttg gagcaagctt ttatccatcc tgtcgctgtt gaaactgctg tcaacgccta
      841 ggatctcggt gctcacattt tcagagggct gatttcccaa tatcttctaa tttcgacaaa
      901 tgtgataaat aatggacaat atatcatact acctaagaca gtatagatat aatttatatc
      961 tacttatata tgtactgtat aagataataa agtttatata agttcactgg tccttatggt
     1021 gcaaagggtt cctctaattt tacagtatg
//
LOCUS       XM_071832228             612 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842051), mRNA.
ACCESSION   XM_071832228
VERSION     XM_071832228.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..612
                     /gene="LOC139842051"
                     /note="uncharacterized LOC139842051; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842051"
     CDS             1..612
                     /gene="LOC139842051"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688329.1"
                     /db_xref="GeneID:139842051"
                     /translation="MPIKQVLKKPEISCRLALWVVELGAYQISYLPRSAVKGQVMADY
                     LAEMSGELEVINERTTLKPIMSETWDLFTDGASCAEGAGAGLVLSSPSGEDHTYALRF
                     NFDVTNNEAEYEAILAGLNIARRIDITKLRAFTDSQLVANQFNGSFEAHDSSMQKYLQ
                     LLKDLAERFEYFELAQVPRIQNKKVDALSKLAAFAFSHFQKQA"
     misc_feature    205..579
                     /gene="LOC139842051"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(220..231,319..327,334..336,406..408,526..528,
                     568..570)
                     /gene="LOC139842051"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgccgatca agcaagtctt aaaaaaacca gagatatctt gcagacttgc gttgtgggtg
       61 gtagagttgg gtgcttatca aatatcttac cttccgcgaa gtgctgtaaa gggtcaggtt
      121 atggcggatt atctcgctga aatgtctgga gaattggagg ttattaatga gcgaacaacg
      181 ttaaaaccga taatgagtga aacttgggat ttatttactg atggtgcttc atgtgcagag
      241 ggcgcaggtg cgggtttggt tttgtcaagc ccaagtggtg aagaccatac atacgcgttg
      301 cgttttaatt ttgatgtgac aaataatgaa gcggagtatg aagcgatact tgctggttta
      361 aatattgcac gaagaataga tataactaag ttacgggcat tcacagattc gcagttagta
      421 gcaaatcagt ttaatggatc ttttgaagca catgattctt caatgcagaa atatttgcaa
      481 ttattgaaag atttagcaga gcggtttgaa tactttgaac tcgcacaagt gccaagaatt
      541 caaaataaga aggtggatgc tttaagtaaa ttggctgctt ttgcgttttc acactttcaa
      601 aaacaagctt ag
//
LOCUS       XM_071832229             714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842053), mRNA.
ACCESSION   XM_071832229
VERSION     XM_071832229.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139842053"
                     /note="uncharacterized LOC139842053; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842053"
     CDS             1..714
                     /gene="LOC139842053"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688330.1"
                     /db_xref="GeneID:139842053"
                     /translation="MSSSDEESLVNAMKSIFAYRNNVVIRREVEEQNEAQSSRRKRRY
                     IHRDRVEAHNRLMKDYFVQDPKYPPEYFKRRYRMSQSLLEKIIEGILSYSTRPNAPKW
                     FTYFQQRPDARGVLGVSTILKVTSAIRQLAYGDSPDLFDEYLQISERTSRESLQNFTR
                     CIIDLYGNVYMREPTEDDIRRLYHKHEELHGFPGMLGSIDCMHWAWGKCPNAWKGHFT
                     RGDHGYPTIMLEAVASYDN"
     misc_feature    508..>708
                     /gene="LOC139842053"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagtagtt ccgacgaaga aagtttggtt aacgcaatga aaagtatatt tgcctatcga
       61 aataacgtgg taatacgtag agaggtcgag gaacaaaatg aggctcaaag ctcaagacga
      121 aaacgtcgct acattcatcg tgatcgtgta gaagcgcaca atcgtttgat gaaagattat
      181 tttgttcaag atccgaagta tccccctgaa tatttcaaac ggcgttatcg aatgtcacaa
      241 agtcttcttg aaaaaataat tgaaggtata ctttcttact ctactcgtcc caatgcacca
      301 aagtggttta cttattttca acaacgtccc gatgcacgtg gtgttctcgg agtatctact
      361 attttaaaag tcacttctgc cattcgtcaa ctagcatatg gtgattcacc ggatctattt
      421 gacgaatatt tacaaatttc agagagaaca tcacgtgagt ctttgcaaaa ttttacaaga
      481 tgtattatag acttgtatgg taatgtatac atgagagaac cgaccgagga cgatatacgt
      541 cgtttgtatc ataaacatga agaacttcac ggctttcctg gaatgcttgg aagcattgat
      601 tgtatgcatt gggcttgggg taaatgtcca aatgcatgga aagggcattt cacccgaggc
      661 gatcacggtt acccgacaat catgttggaa gccgttgcat cgtatgacaa ttga
//
LOCUS       XM_071832230            2055 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842054), mRNA.
ACCESSION   XM_071832230
VERSION     XM_071832230.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2055
                     /gene="LOC139842054"
                     /note="uncharacterized LOC139842054; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842054"
     CDS             1..2055
                     /gene="LOC139842054"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688331.1"
                     /db_xref="GeneID:139842054"
                     /translation="MEQQNKKHLSSIANTLLQRCAMRLDLSVNELIEEFEIGWKPELG
                     GYSRKLVEYCSSKVLNEMCRNNVEDLIKEGVFSRFTFDMMLAWEMPSYVDEESHTEYV
                     AKEKEDKEIPTTAKSTKEQDDDVSLFYSDIMPLLVDNEASVGDDAFVWLGSLVPLVAD
                     FANGRFTFDSLTISTGNRLHFPAYDRYLKEIDACIKHLNNQATPTNIVMADDEFILHV
                     EGTASSQRVVRHIEGQSWPGRLTLTNYAVYFEASGIVSYEDAIKLDLSKDIEQSVEPA
                     ATGPLGAPLFDKAIIYKSSELEEDVQIEFPEMSSSTRRDHWLALVKEIMLLHKFLTKY
                     KVESPLQVWEMHSRTILGSIRLHAAREMLRISPPNPKSFLIFALFDELPTGSNVLQEL
                     AVSLKTIDTTHPCSASSILRNMNVSQVCSGRVESGVGDVRNEIAKNRPENLPSLETAV
                     EQVREEAKEINMAKAKAGEIKDEGIGNSVLVLMELVKPLKSAWPWFQEMIQWERPAST
                     LTVLSLTLLVVYKEWIGKALAVFLMWIVSKMIWARRHEVGKKTKFVVCTASDQSTRES
                     IVSAQHGLNTVYSIMQLTNISILKIWSILLSNAPKHTDMTITAMTGCAIVLAVVPMKF
                     MIMALVVILGFTTSKLGKMIKKKQSDMGNRKLKGWWDSIPVIPVEIVDKVEDIPKEKK
                     TV"
     misc_feature    1327..2004
                     /gene="LOC139842054"
                     /note="Plant protein of unknown function (DUF639); Region:
                     DUF639; pfam04842"
                     /db_xref="CDD:368150"
ORIGIN      
        1 atggagcagc aaaacaagaa gcacctttcc agtattgcaa acacccttct acaacgatgc
       61 gctatgagat tggatttaag tgtgaacgag ttaattgagg aattcgagat tggatggaag
      121 ccagaattgg gaggatattc gagaaagtta gttgaatatt gttcgtcgaa agtattaaac
      181 gaaatgtgta gaaataatgt tgaagatttg ataaaagaag gtgtttttag tcgctttact
      241 ttcgatatga tgcttgcttg ggagatgcct agttatgtag atgaggaatc tcacacggag
      301 tatgtggcca aggagaaaga agataaagag ataccaacaa ctgccaaatc gactaaagag
      361 caagatgatg acgtttcact gttctattca gacatcatgc cattgcttgt agataacgag
      421 gcaagtgtcg gagatgatgc atttgtgtgg ttgggatcgt tagttccttt agtggccgat
      481 ttcgcgaacg gtagattcac ttttgactca ctgactatat ctacagggaa ccgtctacat
      541 tttcctgcct acgacagata ccttaaagaa atcgatgcat gcataaagca tctgaacaac
      601 caagcgacac caacgaatat cgtcatggca gatgatgagt tcattttgca cgttgaggga
      661 actgcaagct cacagagagt tgtacgccat atcgaaggac aaagttggcc tggtaggctc
      721 acgttgacca actacgctgt ttattttgag gcctcgggta ttgtttctta tgaagatgca
      781 attaaactcg acttatcgaa ggatattgag cagtcagtag aaccggcagc cacgggcccg
      841 ttgggtgctc ctctttttga caaggctata atctacaaat catctgaatt ggaagaggat
      901 gtgcaaatcg agttcccgga gatgtctagt tcgactagac gagaccattg gcttgcgctc
      961 gtgaaagaaa ttatgttact acacaagttt ctaacaaaat acaaagttga atcgcctcta
     1021 caagtatggg agatgcattc gaggaccatt ttagggagca taaggctcca tgcggcacgg
     1081 gaaatgctta gaatttcgcc acctaatccc aaaagcttcc ttatatttgc tttgtttgat
     1141 gagttgccta cggggagcaa tgtgctacaa gagcttgctg tgagtctgaa aacaatcgat
     1201 acgacacacc cgtgcagtgc gagttctatt ctacgtaaca tgaatgtctc ccaagtttgt
     1261 agtgggcgtg tagaatcggg agtgggtgac gtgcgtaacg aaattgcaaa aaatagacct
     1321 gaaaatttac cgtctttaga aacggcggtt gaacaggtta gagaggaagc gaaagagatt
     1381 aacatggcga aagctaaggc gggagagata aaagacgaag ggattggaaa tagtgttctt
     1441 gtgttgatgg agttggtgaa gccattaaaa agtgcatggc catggtttca agagatgatc
     1501 cagtgggaaa gaccagcatc caccctaacc gtgctcagct taaccctact cgttgtttat
     1561 aaagaatgga tcggcaaggc cttagcagta tttttaatgt ggatagtctc aaagatgatt
     1621 tgggcaagac gacatgaagt agggaaaaag accaaatttg ttgtgtgtac cgcttctgat
     1681 cagtcgacaa gggagagcat agtgtccgca caacatggac tcaatacagt ttacagcatc
     1741 atgcagttga ccaacatttc aatactgaaa atatggtcca tattgttgtc caatgccccc
     1801 aagcacacag acatgacaat tacggcaatg actggatgcg caattgtact agcagttgtg
     1861 ccaatgaaat ttatgatcat ggcactagta gtaatattgg gctttacaac gtcaaagttg
     1921 gggaagatga ttaagaaaaa acagagcgat atgggaaatc gaaagctaaa aggatggtgg
     1981 gattcaattc cagttattcc cgttgaaatc gtagacaaag ttgaagatat tcccaaggaa
     2041 aagaaaacag tgtaa
//
LOCUS       XM_071832232             738 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842055), mRNA.
ACCESSION   XM_071832232
VERSION     XM_071832232.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..738
                     /gene="LOC139842055"
                     /note="uncharacterized LOC139842055; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842055"
     CDS             1..738
                     /gene="LOC139842055"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688333.1"
                     /db_xref="GeneID:139842055"
                     /translation="MCEVLNRWLVDARDKPIITALEYVREYLMKRIVNVLVVANKKDA
                     NNQILTPNATKLFEANKKDASKYTVLWNGRQKYQVNGLNGEQVVVDLATKECACRRWE
                     ITGMPCKHAIAALYNRSANNDEVEPPEQWVHPVYMMSTWRNTYAFSINPVNGRSMWPK
                     STLPFTLIPPKIVATAGRPKKNRRKGLEEKDNITKDGKLSKKGKQMQCSNCKEFGHNK
                     RGCKNEGVGTKRCSETSGSGTQKKSKK"
     misc_feature    286..>345
                     /gene="LOC139842055"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgtgtgagg tgttgaaccg atggttagtt gatgcaaggg ataaaccaat cattacagca
       61 ttagaatatg tgagagagta tctgatgaag aggattgtga atgtgttggt tgtagcaaac
      121 aaaaaggatg caaataatca gattttaact cctaatgcaa ccaaactttt tgaagcaaat
      181 aagaaggatg caagtaagta tacagttctt tggaatggta gacagaaata tcaggttaat
      241 ggtctcaatg gtgaacaagt ggttgttgat ttagctacta aagagtgtgc ttgtagaagg
      301 tgggagatca ctggcatgcc ttgcaagcat gctattgctg cactttacaa tagatctgca
      361 aataatgatg aagttgaacc accagagcaa tgggttcatc cagtttatat gatgagcact
      421 tggagaaaca cttatgcatt ttccatcaac cctgtaaatg ggagatctat gtggcccaag
      481 tcaactttac cttttaccct aatcccacca aagattgtag caacagcagg cagaccaaag
      541 aaaaatagaa ggaaagggtt ggaagaaaaa gacaacatta ctaaggatgg aaagttgtct
      601 aaaaagggga agcagatgca gtgttctaat tgcaaagaat ttggccacaa taaaagagga
      661 tgcaagaatg aaggagtagg aactaaaagg tgcagtgaga cttcaggaag tggaacacag
      721 aagaagtcaa agaagtga
//
LOCUS       XM_071832233            1356 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides benzyl alcohol
            O-benzoyltransferase-like (LOC139842057), mRNA.
ACCESSION   XM_071832233
VERSION     XM_071832233.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1356
                     /gene="LOC139842057"
                     /note="benzyl alcohol O-benzoyltransferase-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139842057"
     CDS             1..1356
                     /gene="LOC139842057"
                     /codon_start=1
                     /product="benzyl alcohol O-benzoyltransferase-like"
                     /protein_id="XP_071688334.1"
                     /db_xref="GeneID:139842057"
                     /translation="MQKSNMPLTFTVRRRETKLIKPAEPTPIEMKPLSDLDTQEALWV
                     QAPMIQIYRDDIKMRNINPATVIRKALAKLLVLYYPFAGRIREGPGRKLEVDCSGQGV
                     LFIEAEADVRVEQFGETVLPPFPCLEELIYDVPGSSGMVDSPLLLIQVTRLLCGGFII
                     IIRINHIMCDAQGMSQFITALGEMTRGAAIPSILPVWQRELLLPRNPPRVTYTHHEYD
                     QVPITNTICLNTNMVSKAFFFGPTEISILRNHLPTHLKRCTPFELVSAVVWRCRSIAI
                     QPDPEDILRIIFPVNGRYKFKPYIPKGYYGNCVAVPAALSTAKDLFSKPLGHALELVL
                     KAKSCVTEDYIRSTIDLMVLRGRPNITSVNSYFLTDLTQARFNDIDFGWGKAVYGGPA
                     VEDVFSRIGNLYLPYTSKKGEFGAVIPMCLPKPTMERFVKELDNLLIMDANQALHTSK
                     L"
     misc_feature    7..1305
                     /gene="LOC139842057"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     Region: PLN02481; cl23789"
                     /db_xref="CDD:355048"
ORIGIN      
        1 atgcaaaaat ccaacatgcc cttaactttc acggtcagaa ggcgtgaaac aaaactaata
       61 aaaccggctg aaccaacgcc tatagaaatg aagcccctct ccgatctcga cactcaagag
      121 gcgctttggg ttcaagcgcc aatgatccaa atttatcgtg atgatatcaa aatgagaaat
      181 attaatccgg ctactgtgat ccggaaggca ttggctaagc ttttggtgtt atattatccg
      241 tttgctggtc gaatacgaga aggcccgggg aggaagttgg aggtggattg ttcgggccaa
      301 ggtgtgttgt ttatcgaggc cgaggctgat gttagagtcg agcagtttgg tgagacggtt
      361 ttaccaccat tcccttgttt ggaagaactt atatacgatg ttccaggctc gagtggaatg
      421 gttgattcac cattgttgct tattcaggtg acacgattgt tatgcggcgg tttcatcatc
      481 atcatacgaa tcaaccatat tatgtgcgac gcccaaggca tgtcacagtt cataacagcg
      541 ttaggcgaaa tgacacgagg tgcggcaatt ccatcaatct tgcctgtatg gcaaagggag
      601 ctacttcttc ctaggaaccc accgcgcgtc acatatactc accacgagta cgatcaagtc
      661 ccaatcacaa acactatctg tctaaacaca aacatggtta gcaaagcatt tttctttggg
      721 ccaactgaaa tctctattct tcgaaatcat ctaccgaccc acctaaaacg ttgcacccca
      781 tttgaactcg tatcagctgt tgtttggcgt tgtcgttcaa ttgctataca accagatcct
      841 gaagatatat tgcgtatcat cttccctgtt aacggacgtt acaaatttaa accttatatt
      901 cctaagggtt attatggaaa ttgtgtcgcc gtcccagctg cactttcgac tgcgaaagac
      961 ctgttctcaa aaccattggg acatgcactt gagcttgtgt taaaagctaa gtcatgtgtc
     1021 actgaggatt acattagatc aactatcgac cttatggtct taagaggtcg acccaatatc
     1081 acgtcggtta atagctactt ccttactgat ctgactcaag cgcgattcaa tgacatcgat
     1141 tttggatggg gaaaggccgt atatggtgga ccggcagtag aagatgtctt ctcaagaatt
     1201 ggtaatttat acttacctta cacaagcaaa aagggtgagt ttggagctgt aataccgatg
     1261 tgccttccaa aaccaactat ggaaagattt gtcaaggaac ttgataactt gctaataatg
     1321 gatgctaatc aagctttaca tacttccaag ttgtaa
//
LOCUS       XM_071832234             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides LOB domain-containing
            protein 20-like (LOC139842058), mRNA.
ACCESSION   XM_071832234
VERSION     XM_071832234.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139842058"
                     /note="LOB domain-containing protein 20-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842058"
     CDS             1..720
                     /gene="LOC139842058"
                     /codon_start=1
                     /product="LOB domain-containing protein 20-like"
                     /protein_id="XP_071688335.1"
                     /db_xref="GeneID:139842058"
                     /translation="MADSSDSRRKGTGVGKRVSGSFDAAASDSGSIPNPPCGACKFLR
                     RKCVNGCIFAPYFGSDQGAARFAAVHKVFGASNVSKLLTHIPVNRRQHAVVTISYEAQ
                     ARLSDPVYGCVSTVLALQQQVAALQTELAIVQNQLISNKLLVANALQSSQQVDPMHHL
                     SLLQPAYSNASSASNNNMLNMNSYDSGLNNLADDHHSATLSHQSFNPLQLCQPCNDDE
                     DDDEEESGDPLAFANQMLQSR"
     misc_feature    106..405
                     /gene="LOC139842058"
                     /note="Lateral organ boundaries (LOB) domain; Region: LOB;
                     pfam03195"
                     /db_xref="CDD:460843"
ORIGIN      
        1 atggctgact catccgacag tcggcggaag ggaaccggag tcggaaagcg ggtcagtggg
       61 tcatttgatg ctgcagcatc agattctggt tctattccca acccaccttg tggagcgtgt
      121 aaattcttaa ggagaaagtg tgtcaatggg tgcatatttg caccctactt tgggtctgac
      181 cagggtgcag cccggtttgc tgcagtgcac aaggtgtttg gagccagcaa tgtgtcaaaa
      241 ctactgactc atataccagt taaccgacga caacatgcag tcgtgactat atcttacgaa
      301 gcacaggcta ggttatctga cccagtttat ggttgtgtat caactgtcct ggctttgcaa
      361 caacaggtag cagcattgca aacagagcta gcaatagtac agaaccagct gataagcaac
      421 aagcttctag tcgcaaacgc acttcagagt tcacaacaag tggatccaat gcaccacctt
      481 tcgctgctgc agcccgcata ttcaaatgca tcatctgctt caaataacaa catgcttaac
      541 atgaacagtt atgattctgg tttaaataat cttgcagatg atcatcacag tgctacactt
      601 tcacatcaga gttttaatcc tctgcaactt tgtcagccat gtaatgatga tgaagatgat
      661 gatgaggaag agagtgggga cccactagcc tttgccaatc agatgcttca atcaagatga
//
LOCUS       XM_071832235             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842059), mRNA.
ACCESSION   XM_071832235
VERSION     XM_071832235.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139842059"
                     /note="uncharacterized LOC139842059; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842059"
     CDS             1..813
                     /gene="LOC139842059"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688336.1"
                     /db_xref="GeneID:139842059"
                     /translation="MVDYLAKTAADMLAICDPEQLPVPPLELWELYTDVTTSSEGAGA
                     RLILTGLHQEDHTYALRFSFKVTNNEAEYEALLAGMRIAQELGIKKLQAYVDSQLVAN
                     QINGTFDANEKSMQSYLALVHSLADTFIDFRISQIPKSQNKQADVLSNLAALTFNHLE
                     KKILVEQVFKKSIEPEITVASVEEEEATWMTEIIEFLCTGSLPEDEKEVMKIRVKVPN
                     YEMRGEILYQKSYLGASLRCIGPKEAIVIIDEIHKGSCGLHSGSRMVTERIK"
     misc_feature    85..459
                     /gene="LOC139842059"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(100..102,103..105,199..207,214..216,286..288,
                     406..408,448..450)
                     /gene="LOC139842059"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggtcgatt atttggctaa aacggccgct gatatgctgg caatatgtga ccctgagcaa
       61 cttcccgtgc ctcctctcga actatgggag ctctataccg atgtcacaac aagctctgag
      121 ggtgctggcg caaggttaat cctcacaggt ctgcatcagg aagatcatac ttatgctttg
      181 cggttcagct ttaaggtgac aaacaacgag gcagagtacg aagcgctatt agcagggatg
      241 cgtatagccc aagagttggg aataaaaaag ctacaagcct atgtggattc acaattagtc
      301 gctaatcaga taaatggcac gttcgacgcc aatgaaaaat ccatgcaatc atacttggct
      361 ctggtccact ctctggccga tacatttatc gacttcagga tcagtcaaat ccccaagagt
      421 caaaacaaac aagcggatgt acttagtaat ctagcagctc tcaccttcaa ccatctggaa
      481 aagaagatat tagtggagca agttttcaaa aaatccattg aaccggagat aacggttgca
      541 tctgtagagg aagaagaagc aacttggatg acagaaatta tagaattcct gtgcactgga
      601 tccttacccg aggatgagaa ggaagtaatg aagattagag tgaaagtgcc aaattatgaa
      661 atgagaggag aaatcctata tcaaaaatct tatttgggcg catcactacg ctgcatagga
      721 cctaaagaag ccattgtgat tatcgatgag attcacaagg gatcgtgcgg gttacattct
      781 ggatcaagga tggttactga gaggattaag tga
//
LOCUS       XM_071832236            4143 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides coatomer subunit
            alpha-1-like (LOC139842060), transcript variant X1, mRNA.
ACCESSION   XM_071832236
VERSION     XM_071832236.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4143
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4143
                     /gene="LOC139842060"
                     /note="coatomer subunit alpha-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     Proteins"
                     /db_xref="GeneID:139842060"
     CDS             113..3763
                     /gene="LOC139842060"
                     /codon_start=1
                     /product="coatomer subunit alpha-1-like"
                     /protein_id="XP_071688337.1"
                     /db_xref="GeneID:139842060"
                     /translation="MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLI
                     DRFDEHDGPVRGVHFHQSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFH
                     HENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVR
                     VWDIGALKKKSASPADDILRLSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPL
                     IVSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWD
                     STKRTGLQTFRREHDRFWILGCHPEMNLLAAGHDSGMIVFKLERERPAFSVSNDSLFF
                     VKDRFLRFYEYSSQKDTQILPIRRPGSVSLNQGPRTLSYSPTENVVLICSDVDGGSYE
                     LYIIPKDSLTRGDTVQEAKRGVGGSAVFVARNRFAVLEKSTNQVLVKNLKNEIVKKSA
                     LPGPTDAIFYAGTGNLLCRSEDRVFIFDLQQRLVLGDLQTSFVRYVVWSNDMESVALL
                     SKHSIVIADKKLVHRCTLHETIRVKSGSWDDKGVFIYTTLTHIKYCLPNGDSGIIKTL
                     DVPVYITKIFGNTIFCLDRDGKNRPIVIDSTEYVFKLSLLKKRYDDVMTMIRNSELCG
                     QAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVE
                     ALRQGNSGIVEYAYQRTKNFERLSFLYLITGNLDKLSKMMKIAEVKNDVMGQFHNALY
                     LGDVQERIKILISAGHLPLAYATAKTHGLTHIVEDLADKLQSNVPTLPSGKSGSLLMP
                     PTPVLCGGDWPLLRVMKGIFDGSLDNAGKGGNEDYDDADDANWVEDLDIDVDNNQNGD
                     ISIVLDDEEANEEEDEEGGWDLEDLELPPDNETPKANTTRSSVFVAPTPGMPVSQIWV
                     QKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFTPLKSFFIDLHMGSHTYLRAFSSAPLI
                     SLAIERNWCESASPNVRAPPALVFNFTQLEEKLKAGYKATTTGKFTEALRVFLTILHT
                     IPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDDPVRQQELAAYFTHCNLQ
                     LPHLRLALMNAMTICYKARNLITASNFARRLLETNPTAENQTKTARSVIQAAERNMND
                     ATQLNYDFRNPFVVCGATYVPIYRGQKDVVCPYCNSHFVVSQEGQLCTVCDLAVVGSD
                     ASGLLCSSAQIR"
     misc_feature    137..1063
                     /gene="LOC139842060"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    155..259
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    order(188..190,200..202,218..223,257..262,314..316,
                     326..328,344..349,383..388,437..439,452..454,470..475,
                     512..514,563..565,578..580,596..601,716..721,773..775,
                     785..787,803..808,848..853,902..904,917..919,935..940,
                     974..979,1031..1033,1040..1042,1058..1063)
                     /gene="LOC139842060"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    281..385
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    401..511
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    524..715
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    734..847
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    863..973
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    995..1177
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1079..2440
                     /gene="LOC139842060"
                     /note="Coatomer WD Associated Region from Coatomer Subunit
                     Alpha; Region: Coatomer_WDAD_alpha; cd22948"
                     /db_xref="CDD:438573"
     misc_feature    1079..1120
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1208..1354
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1361..1432
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1493..1582
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1589..1687
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1733..1813
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1817..1894
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    order(2330..2338,2396..2401,2405..2416)
                     /gene="LOC139842060"
                     /note="coatomer subunit alpha binding site [active]"
                     /db_xref="CDD:438573"
     misc_feature    2558..3742
                     /gene="LOC139842060"
                     /note="Coatomer (COPI) alpha subunit C-terminus; Region:
                     COPI_C; pfam06957"
                     /db_xref="CDD:462050"
     polyA_site      4143
                     /gene="LOC139842060"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttttttttt atctctcaaa tgccgtctga tcacaaatct caataatcca tccgttaatc
       61 aatctaatct aattctcaga tctaagttag ggtttgagaa cgaacagaga agatgttgac
      121 aaaatttgaa acgaaaagta atagagtgaa aggattgagt tttcatagta agagaccttg
      181 gatcttagct agtcttcaca gtggtgtgat ccagctatgg gattatcgta tgggaactct
      241 cattgatcgg ttcgatgaac acgatggtcc tgttcgtggc gttcactttc atcaatctca
      301 gccccttttt gtttctggag gagatgatta caaaataaaa gtatggaact acaaactgca
      361 ccggtgtttg tttacgctgc ttggtcatct tgattatatc cgtactgttc aatttcacca
      421 tgaaaatcca tggattgtta gtgcaagtga tgatcaaact atcagaatat ggaattggca
      481 gtctcgtact tgtatatcag ttctaacagg tcataaccat tacgttatgt gtgctttgtt
      541 tcatccaaag gaggaccttg tggtttcagc atcattagat cagactgtta gggtttggga
      601 tattggtgct ttaaagaaaa agtcagcttc ccctgctgat gatattctta ggttaagtca
      661 gatgaataca gatttctttg gtggggtcga tgctgttgtg aagtatgttt tggagggaca
      721 tgatcgaggt gtcaattggg catcatttca tcctactctt cctcttattg tttctggagc
      781 tgatgatcgc caagtgaaga tttggcgaat gaatgataca aaagcttggg aagtagacac
      841 attacgtgga cacatgaaca acgtttcatg tgttcttttc catgcaagac aagacattat
      901 agtatcaaac tcagaagata aaagcatacg cgtttgggac tctacaaaac gaaccggcct
      961 tcaaacgttc cgcagggaac acgacaggtt ctggattctc ggttgtcatc ccgagatgaa
     1021 ccttcttgca gccggacatg acagtggcat gatcgttttc aaattagaaa gagaacgtcc
     1081 tgctttttct gttagcaacg attccctgtt cttcgttaaa gaccgttttc taaggtttta
     1141 tgaatactca tctcaaaaag acactcaaat actaccaatc cgtcgacctg gttctgtcag
     1201 cttgaaccag ggcccgcgta cactatcata cagcccaact gaaaacgtag ttctaatatg
     1261 ttcagatgta gatggtgggt cctacgaact atacatcatc cctaaagata gtcttactag
     1321 aggtgataca gttcaagaag caaaacgtgg tgttggcggt tcggccgttt tcgttgctcg
     1381 aaatcggttc gcagttcttg aaaagagcac caatcaggtg ttggttaaaa acttaaaaaa
     1441 tgagattgtg aaaaaaagtg ctcttcctgg tcctaccgat gctatattct atgctggtac
     1501 aggtaacttg ttgtgtaggt cagaagatag agtattcatc tttgacctac aacaacgatt
     1561 ggttcttgga gatcttcaaa cttcttttgt tagatatgtt gtttggtcaa atgatatgga
     1621 gagtgttgct ttgctaagca aacattcaat agtcatagct gataagaagc ttgttcatcg
     1681 atgcacactt cacgagacga ttcgcgtgaa aagtggttcg tgggatgata aaggtgtgtt
     1741 catatacaca accctgaccc atatcaaata ctgtttacca aacggggaca gtggaatcat
     1801 caaaaccctc gatgttcccg tttacatcac gaaaatattt ggaaacacaa ttttttgctt
     1861 ggacagagat ggtaaaaacc gcccgatagt tattgattca actgaatatg tgtttaagtt
     1921 atctttactg aaaaagagat acgacgatgt aatgactatg attagaaact cagaactgtg
     1981 cggtcaagca atgattgcgt atcttcaaca aaaaggtttt cctgaagttg ctttacattt
     2041 cgtgaaggac gaacgaactc gtttcaattt agcactagaa agtggaaaca ttcaaatagc
     2101 tgttgcgtct gctaaagaaa ttgatgaaaa agatcactgg tataggttag gggttgaggc
     2161 tcttcggcag ggtaattctg gtattgttga atatgcatat cagcggacta aaaactttga
     2221 aaggctatct ttcctttatc tgataactgg taatttggat aaactgtcca aaatgatgaa
     2281 gatcgccgag gtgaaaaatg atgtcatggg tcagttccac aatgcattgt atttgggtga
     2341 tgttcaagaa cgaatcaaga ttttaatcag tgcaggtcat ctaccattag catatgctac
     2401 agctaaaacc catgggttga cccatattgt tgaagacctt gctgataaac ttcaaagtaa
     2461 tgttcctact ttgcccagtg gtaagtctgg ttctcttttg atgccgccga cacctgtcct
     2521 atgtggcgga gactggccgc tactgagggt catgaaaggg atcttcgacg gtagtctcga
     2581 taacgccgga aaaggtggaa atgaggatta tgatgatgct gatgatgcta actgggttga
     2641 ggatttggat atcgatgtag acaacaatca gaatggtgac atcagcattg tgttggatga
     2701 tgaagaagca aacgaagaag aagacgaaga gggtggttgg gatcttgaag atcttgaact
     2761 gccacccgat aatgaaaccc cgaaagctaa tactactcgt tcttctgttt ttgtggcccc
     2821 cactcctggt atgcctgtaa gtcaaatttg ggtgcagaaa tcgtctcttg ctgctgaaca
     2881 tgcagccgct ggaaacttcg acaccgccat gcggttactg agtcgccaac tcggtattaa
     2941 aaatttcaca cctttaaaat ctttctttat cgatctccac atgggaagtc acacttattt
     3001 acgcgctttc tcatctgctc cattaatctc cttggccatc gagaggaatt ggtgtgagtc
     3061 agcaagtcct aatgtccggg ccccaccggc actcgtcttc aatttcaccc aattagaaga
     3121 aaaactcaaa gctggttaca aagcaacaac aaccgggaag tttactgaag cgttgcgtgt
     3181 ttttcttacc attcttcata ccattccttt gattgttgtt gagtcaagaa gagaagttga
     3241 tgaggttaaa gaattgatta ttattgtgaa ggagtatgtt ttgggcttac agatggaact
     3301 taaaagaaga gaattaaaag atgacccggt tcgtcaacaa gaactggcag cttatttcac
     3361 tcactgtaac cttcaattac cacatttgag acttgcattg atgaatgcta tgactatttg
     3421 ttacaaggca cgtaatctaa tcacagcatc aaacttcgcc aggaggcttt tggagactaa
     3481 cccgactgcc gaaaaccaaa ccaaaactgc ccgttcagtt atacaagctg ctgaaaggaa
     3541 catgaatgat gccacacagc tgaattatga ttttagaaat ccgtttgttg tttgtggggc
     3601 cacttatgtt cctatatatc ggggacagaa ggatgtagta tgcccatact gtaattcaca
     3661 ctttgttgtt tcccaggaag gacagctttg tactgtttgt gaccttgcag tggttggatc
     3721 agatgcttct ggcttactat gttcttcagc tcagatccga taattcaaca gtttgggtaa
     3781 tcctcttcct cttaggattc tcaagtagag tggaatattt tggcttgtag ctgatgcttt
     3841 atgctgcaat atcagggagc ttgtgaaagt aaactgtaga gtagatgatt tagtaaccgg
     3901 gatgttcatg ttggttgctg gtcttgtagt atgtggcaaa gatacaacaa gaaagttact
     3961 tggtttcatg aaaaggaatg atggttgttt attcttgaat ttgcttagga ttcaatatta
     4021 agacatttcg acttattttt gttttcatat tgatgttgga atttgctgaa ttgggtctgt
     4081 ttaatatata ggcatatggt ggtacttggt tgttttttac aataatattt caggacttca
     4141 tgt
//
LOCUS       XM_071832237            4099 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides coatomer subunit
            alpha-1-like (LOC139842060), transcript variant X2, mRNA.
ACCESSION   XM_071832237
VERSION     XM_071832237.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4099
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4099
                     /gene="LOC139842060"
                     /note="coatomer subunit alpha-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     Proteins"
                     /db_xref="GeneID:139842060"
     CDS             69..3719
                     /gene="LOC139842060"
                     /codon_start=1
                     /product="coatomer subunit alpha-1-like"
                     /protein_id="XP_071688338.1"
                     /db_xref="GeneID:139842060"
                     /translation="MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLI
                     DRFDEHDGPVRGVHFHQSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFH
                     HENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVR
                     VWDIGALKKKSASPADDILRLSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPL
                     IVSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWD
                     STKRTGLQTFRREHDRFWILGCHPEMNLLAAGHDSGMIVFKLERERPAFSVSNDSLFF
                     VKDRFLRFYEYSSQKDTQILPIRRPGSVSLNQGPRTLSYSPTENVVLICSDVDGGSYE
                     LYIIPKDSLTRGDTVQEAKRGVGGSAVFVARNRFAVLEKSTNQVLVKNLKNEIVKKSA
                     LPGPTDAIFYAGTGNLLCRSEDRVFIFDLQQRLVLGDLQTSFVRYVVWSNDMESVALL
                     SKHSIVIADKKLVHRCTLHETIRVKSGSWDDKGVFIYTTLTHIKYCLPNGDSGIIKTL
                     DVPVYITKIFGNTIFCLDRDGKNRPIVIDSTEYVFKLSLLKKRYDDVMTMIRNSELCG
                     QAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVE
                     ALRQGNSGIVEYAYQRTKNFERLSFLYLITGNLDKLSKMMKIAEVKNDVMGQFHNALY
                     LGDVQERIKILISAGHLPLAYATAKTHGLTHIVEDLADKLQSNVPTLPSGKSGSLLMP
                     PTPVLCGGDWPLLRVMKGIFDGSLDNAGKGGNEDYDDADDANWVEDLDIDVDNNQNGD
                     ISIVLDDEEANEEEDEEGGWDLEDLELPPDNETPKANTTRSSVFVAPTPGMPVSQIWV
                     QKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFTPLKSFFIDLHMGSHTYLRAFSSAPLI
                     SLAIERNWCESASPNVRAPPALVFNFTQLEEKLKAGYKATTTGKFTEALRVFLTILHT
                     IPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDDPVRQQELAAYFTHCNLQ
                     LPHLRLALMNAMTICYKARNLITASNFARRLLETNPTAENQTKTARSVIQAAERNMND
                     ATQLNYDFRNPFVVCGATYVPIYRGQKDVVCPYCNSHFVVSQEGQLCTVCDLAVVGSD
                     ASGLLCSSAQIR"
     misc_feature    93..1019
                     /gene="LOC139842060"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    111..215
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    order(144..146,156..158,174..179,213..218,270..272,
                     282..284,300..305,339..344,393..395,408..410,426..431,
                     468..470,519..521,534..536,552..557,672..677,729..731,
                     741..743,759..764,804..809,858..860,873..875,891..896,
                     930..935,987..989,996..998,1014..1019)
                     /gene="LOC139842060"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    237..341
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    357..467
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    480..671
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    690..803
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    819..929
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    951..1133
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1035..2396
                     /gene="LOC139842060"
                     /note="Coatomer WD Associated Region from Coatomer Subunit
                     Alpha; Region: Coatomer_WDAD_alpha; cd22948"
                     /db_xref="CDD:438573"
     misc_feature    1035..1076
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1164..1310
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1317..1388
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1449..1538
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1545..1643
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1689..1769
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1773..1850
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    order(2286..2294,2352..2357,2361..2372)
                     /gene="LOC139842060"
                     /note="coatomer subunit alpha binding site [active]"
                     /db_xref="CDD:438573"
     misc_feature    2514..3698
                     /gene="LOC139842060"
                     /note="Coatomer (COPI) alpha subunit C-terminus; Region:
                     COPI_C; pfam06957"
                     /db_xref="CDD:462050"
     polyA_site      4099
                     /gene="LOC139842060"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caataatcca tccgttaatc aatctaatct aattctcaga tctaagggtt tgagaacgaa
       61 cagagaagat gttgacaaaa tttgaaacga aaagtaatag agtgaaagga ttgagttttc
      121 atagtaagag accttggatc ttagctagtc ttcacagtgg tgtgatccag ctatgggatt
      181 atcgtatggg aactctcatt gatcggttcg atgaacacga tggtcctgtt cgtggcgttc
      241 actttcatca atctcagccc ctttttgttt ctggaggaga tgattacaaa ataaaagtat
      301 ggaactacaa actgcaccgg tgtttgttta cgctgcttgg tcatcttgat tatatccgta
      361 ctgttcaatt tcaccatgaa aatccatgga ttgttagtgc aagtgatgat caaactatca
      421 gaatatggaa ttggcagtct cgtacttgta tatcagttct aacaggtcat aaccattacg
      481 ttatgtgtgc tttgtttcat ccaaaggagg accttgtggt ttcagcatca ttagatcaga
      541 ctgttagggt ttgggatatt ggtgctttaa agaaaaagtc agcttcccct gctgatgata
      601 ttcttaggtt aagtcagatg aatacagatt tctttggtgg ggtcgatgct gttgtgaagt
      661 atgttttgga gggacatgat cgaggtgtca attgggcatc atttcatcct actcttcctc
      721 ttattgtttc tggagctgat gatcgccaag tgaagatttg gcgaatgaat gatacaaaag
      781 cttgggaagt agacacatta cgtggacaca tgaacaacgt ttcatgtgtt cttttccatg
      841 caagacaaga cattatagta tcaaactcag aagataaaag catacgcgtt tgggactcta
      901 caaaacgaac cggccttcaa acgttccgca gggaacacga caggttctgg attctcggtt
      961 gtcatcccga gatgaacctt cttgcagccg gacatgacag tggcatgatc gttttcaaat
     1021 tagaaagaga acgtcctgct ttttctgtta gcaacgattc cctgttcttc gttaaagacc
     1081 gttttctaag gttttatgaa tactcatctc aaaaagacac tcaaatacta ccaatccgtc
     1141 gacctggttc tgtcagcttg aaccagggcc cgcgtacact atcatacagc ccaactgaaa
     1201 acgtagttct aatatgttca gatgtagatg gtgggtccta cgaactatac atcatcccta
     1261 aagatagtct tactagaggt gatacagttc aagaagcaaa acgtggtgtt ggcggttcgg
     1321 ccgttttcgt tgctcgaaat cggttcgcag ttcttgaaaa gagcaccaat caggtgttgg
     1381 ttaaaaactt aaaaaatgag attgtgaaaa aaagtgctct tcctggtcct accgatgcta
     1441 tattctatgc tggtacaggt aacttgttgt gtaggtcaga agatagagta ttcatctttg
     1501 acctacaaca acgattggtt cttggagatc ttcaaacttc ttttgttaga tatgttgttt
     1561 ggtcaaatga tatggagagt gttgctttgc taagcaaaca ttcaatagtc atagctgata
     1621 agaagcttgt tcatcgatgc acacttcacg agacgattcg cgtgaaaagt ggttcgtggg
     1681 atgataaagg tgtgttcata tacacaaccc tgacccatat caaatactgt ttaccaaacg
     1741 gggacagtgg aatcatcaaa accctcgatg ttcccgttta catcacgaaa atatttggaa
     1801 acacaatttt ttgcttggac agagatggta aaaaccgccc gatagttatt gattcaactg
     1861 aatatgtgtt taagttatct ttactgaaaa agagatacga cgatgtaatg actatgatta
     1921 gaaactcaga actgtgcggt caagcaatga ttgcgtatct tcaacaaaaa ggttttcctg
     1981 aagttgcttt acatttcgtg aaggacgaac gaactcgttt caatttagca ctagaaagtg
     2041 gaaacattca aatagctgtt gcgtctgcta aagaaattga tgaaaaagat cactggtata
     2101 ggttaggggt tgaggctctt cggcagggta attctggtat tgttgaatat gcatatcagc
     2161 ggactaaaaa ctttgaaagg ctatctttcc tttatctgat aactggtaat ttggataaac
     2221 tgtccaaaat gatgaagatc gccgaggtga aaaatgatgt catgggtcag ttccacaatg
     2281 cattgtattt gggtgatgtt caagaacgaa tcaagatttt aatcagtgca ggtcatctac
     2341 cattagcata tgctacagct aaaacccatg ggttgaccca tattgttgaa gaccttgctg
     2401 ataaacttca aagtaatgtt cctactttgc ccagtggtaa gtctggttct cttttgatgc
     2461 cgccgacacc tgtcctatgt ggcggagact ggccgctact gagggtcatg aaagggatct
     2521 tcgacggtag tctcgataac gccggaaaag gtggaaatga ggattatgat gatgctgatg
     2581 atgctaactg ggttgaggat ttggatatcg atgtagacaa caatcagaat ggtgacatca
     2641 gcattgtgtt ggatgatgaa gaagcaaacg aagaagaaga cgaagagggt ggttgggatc
     2701 ttgaagatct tgaactgcca cccgataatg aaaccccgaa agctaatact actcgttctt
     2761 ctgtttttgt ggcccccact cctggtatgc ctgtaagtca aatttgggtg cagaaatcgt
     2821 ctcttgctgc tgaacatgca gccgctggaa acttcgacac cgccatgcgg ttactgagtc
     2881 gccaactcgg tattaaaaat ttcacacctt taaaatcttt ctttatcgat ctccacatgg
     2941 gaagtcacac ttatttacgc gctttctcat ctgctccatt aatctccttg gccatcgaga
     3001 ggaattggtg tgagtcagca agtcctaatg tccgggcccc accggcactc gtcttcaatt
     3061 tcacccaatt agaagaaaaa ctcaaagctg gttacaaagc aacaacaacc gggaagttta
     3121 ctgaagcgtt gcgtgttttt cttaccattc ttcataccat tcctttgatt gttgttgagt
     3181 caagaagaga agttgatgag gttaaagaat tgattattat tgtgaaggag tatgttttgg
     3241 gcttacagat ggaacttaaa agaagagaat taaaagatga cccggttcgt caacaagaac
     3301 tggcagctta tttcactcac tgtaaccttc aattaccaca tttgagactt gcattgatga
     3361 atgctatgac tatttgttac aaggcacgta atctaatcac agcatcaaac ttcgccagga
     3421 ggcttttgga gactaacccg actgccgaaa accaaaccaa aactgcccgt tcagttatac
     3481 aagctgctga aaggaacatg aatgatgcca cacagctgaa ttatgatttt agaaatccgt
     3541 ttgttgtttg tggggccact tatgttccta tatatcgggg acagaaggat gtagtatgcc
     3601 catactgtaa ttcacacttt gttgtttccc aggaaggaca gctttgtact gtttgtgacc
     3661 ttgcagtggt tggatcagat gcttctggct tactatgttc ttcagctcag atccgataat
     3721 tcaacagttt gggtaatcct cttcctctta ggattctcaa gtagagtgga atattttggc
     3781 ttgtagctga tgctttatgc tgcaatatca gggagcttgt gaaagtaaac tgtagagtag
     3841 atgatttagt aaccgggatg ttcatgttgg ttgctggtct tgtagtatgt ggcaaagata
     3901 caacaagaaa gttacttggt ttcatgaaaa ggaatgatgg ttgtttattc ttgaatttgc
     3961 ttaggattca atattaagac atttcgactt atttttgttt tcatattgat gttggaattt
     4021 gctgaattgg gtctgtttaa tatataggca tatggtggta cttggttgtt ttttacaata
     4081 atatttcagg acttcatgt
//
LOCUS       XM_071832238            4124 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides coatomer subunit
            alpha-1-like (LOC139842060), transcript variant X3, mRNA.
ACCESSION   XM_071832238
VERSION     XM_071832238.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4124
                     /gene="LOC139842060"
                     /note="coatomer subunit alpha-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     Proteins"
                     /db_xref="GeneID:139842060"
     CDS             113..3763
                     /gene="LOC139842060"
                     /codon_start=1
                     /product="coatomer subunit alpha-1-like"
                     /protein_id="XP_071688339.1"
                     /db_xref="GeneID:139842060"
                     /translation="MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLI
                     DRFDEHDGPVRGVHFHQSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFH
                     HENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVR
                     VWDIGALKKKSASPADDILRLSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPL
                     IVSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWD
                     STKRTGLQTFRREHDRFWILGCHPEMNLLAAGHDSGMIVFKLERERPAFSVSNDSLFF
                     VKDRFLRFYEYSSQKDTQILPIRRPGSVSLNQGPRTLSYSPTENVVLICSDVDGGSYE
                     LYIIPKDSLTRGDTVQEAKRGVGGSAVFVARNRFAVLEKSTNQVLVKNLKNEIVKKSA
                     LPGPTDAIFYAGTGNLLCRSEDRVFIFDLQQRLVLGDLQTSFVRYVVWSNDMESVALL
                     SKHSIVIADKKLVHRCTLHETIRVKSGSWDDKGVFIYTTLTHIKYCLPNGDSGIIKTL
                     DVPVYITKIFGNTIFCLDRDGKNRPIVIDSTEYVFKLSLLKKRYDDVMTMIRNSELCG
                     QAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVE
                     ALRQGNSGIVEYAYQRTKNFERLSFLYLITGNLDKLSKMMKIAEVKNDVMGQFHNALY
                     LGDVQERIKILISAGHLPLAYATAKTHGLTHIVEDLADKLQSNVPTLPSGKSGSLLMP
                     PTPVLCGGDWPLLRVMKGIFDGSLDNAGKGGNEDYDDADDANWVEDLDIDVDNNQNGD
                     ISIVLDDEEANEEEDEEGGWDLEDLELPPDNETPKANTTRSSVFVAPTPGMPVSQIWV
                     QKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFTPLKSFFIDLHMGSHTYLRAFSSAPLI
                     SLAIERNWCESASPNVRAPPALVFNFTQLEEKLKAGYKATTTGKFTEALRVFLTILHT
                     IPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDDPVRQQELAAYFTHCNLQ
                     LPHLRLALMNAMTICYKARNLITASNFARRLLETNPTAENQTKTARSVIQAAERNMND
                     ATQLNYDFRNPFVVCGATYVPIYRGQKDVVCPYCNSHFVVSQEGQLCTVCDLAVVGSD
                     ASGLLCSSAQIR"
     misc_feature    137..1063
                     /gene="LOC139842060"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; Region:
                     WD40; cd00200"
                     /db_xref="CDD:238121"
     misc_feature    155..259
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    order(188..190,200..202,218..223,257..262,314..316,
                     326..328,344..349,383..388,437..439,452..454,470..475,
                     512..514,563..565,578..580,596..601,716..721,773..775,
                     785..787,803..808,848..853,902..904,917..919,935..940,
                     974..979,1031..1033,1040..1042,1058..1063)
                     /gene="LOC139842060"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     misc_feature    281..385
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    401..511
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    524..715
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    734..847
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    863..973
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    995..1177
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    1079..2440
                     /gene="LOC139842060"
                     /note="Coatomer WD Associated Region from Coatomer Subunit
                     Alpha; Region: Coatomer_WDAD_alpha; cd22948"
                     /db_xref="CDD:438573"
     misc_feature    1079..1120
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1208..1354
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1361..1432
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1493..1582
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1589..1687
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1733..1813
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    1817..1894
                     /gene="LOC139842060"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:438573"
     misc_feature    order(2330..2338,2396..2401,2405..2416)
                     /gene="LOC139842060"
                     /note="coatomer subunit alpha binding site [active]"
                     /db_xref="CDD:438573"
     misc_feature    2558..3742
                     /gene="LOC139842060"
                     /note="Coatomer (COPI) alpha subunit C-terminus; Region:
                     COPI_C; pfam06957"
                     /db_xref="CDD:462050"
     polyA_site      4124
                     /gene="LOC139842060"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttttttttt atctctcaaa tgccgtctga tcacaaatct caataatcca tccgttaatc
       61 aatctaatct aattctcaga tctaagttag ggtttgagaa cgaacagaga agatgttgac
      121 aaaatttgaa acgaaaagta atagagtgaa aggattgagt tttcatagta agagaccttg
      181 gatcttagct agtcttcaca gtggtgtgat ccagctatgg gattatcgta tgggaactct
      241 cattgatcgg ttcgatgaac acgatggtcc tgttcgtggc gttcactttc atcaatctca
      301 gccccttttt gtttctggag gagatgatta caaaataaaa gtatggaact acaaactgca
      361 ccggtgtttg tttacgctgc ttggtcatct tgattatatc cgtactgttc aatttcacca
      421 tgaaaatcca tggattgtta gtgcaagtga tgatcaaact atcagaatat ggaattggca
      481 gtctcgtact tgtatatcag ttctaacagg tcataaccat tacgttatgt gtgctttgtt
      541 tcatccaaag gaggaccttg tggtttcagc atcattagat cagactgtta gggtttggga
      601 tattggtgct ttaaagaaaa agtcagcttc ccctgctgat gatattctta ggttaagtca
      661 gatgaataca gatttctttg gtggggtcga tgctgttgtg aagtatgttt tggagggaca
      721 tgatcgaggt gtcaattggg catcatttca tcctactctt cctcttattg tttctggagc
      781 tgatgatcgc caagtgaaga tttggcgaat gaatgataca aaagcttggg aagtagacac
      841 attacgtgga cacatgaaca acgtttcatg tgttcttttc catgcaagac aagacattat
      901 agtatcaaac tcagaagata aaagcatacg cgtttgggac tctacaaaac gaaccggcct
      961 tcaaacgttc cgcagggaac acgacaggtt ctggattctc ggttgtcatc ccgagatgaa
     1021 ccttcttgca gccggacatg acagtggcat gatcgttttc aaattagaaa gagaacgtcc
     1081 tgctttttct gttagcaacg attccctgtt cttcgttaaa gaccgttttc taaggtttta
     1141 tgaatactca tctcaaaaag acactcaaat actaccaatc cgtcgacctg gttctgtcag
     1201 cttgaaccag ggcccgcgta cactatcata cagcccaact gaaaacgtag ttctaatatg
     1261 ttcagatgta gatggtgggt cctacgaact atacatcatc cctaaagata gtcttactag
     1321 aggtgataca gttcaagaag caaaacgtgg tgttggcggt tcggccgttt tcgttgctcg
     1381 aaatcggttc gcagttcttg aaaagagcac caatcaggtg ttggttaaaa acttaaaaaa
     1441 tgagattgtg aaaaaaagtg ctcttcctgg tcctaccgat gctatattct atgctggtac
     1501 aggtaacttg ttgtgtaggt cagaagatag agtattcatc tttgacctac aacaacgatt
     1561 ggttcttgga gatcttcaaa cttcttttgt tagatatgtt gtttggtcaa atgatatgga
     1621 gagtgttgct ttgctaagca aacattcaat agtcatagct gataagaagc ttgttcatcg
     1681 atgcacactt cacgagacga ttcgcgtgaa aagtggttcg tgggatgata aaggtgtgtt
     1741 catatacaca accctgaccc atatcaaata ctgtttacca aacggggaca gtggaatcat
     1801 caaaaccctc gatgttcccg tttacatcac gaaaatattt ggaaacacaa ttttttgctt
     1861 ggacagagat ggtaaaaacc gcccgatagt tattgattca actgaatatg tgtttaagtt
     1921 atctttactg aaaaagagat acgacgatgt aatgactatg attagaaact cagaactgtg
     1981 cggtcaagca atgattgcgt atcttcaaca aaaaggtttt cctgaagttg ctttacattt
     2041 cgtgaaggac gaacgaactc gtttcaattt agcactagaa agtggaaaca ttcaaatagc
     2101 tgttgcgtct gctaaagaaa ttgatgaaaa agatcactgg tataggttag gggttgaggc
     2161 tcttcggcag ggtaattctg gtattgttga atatgcatat cagcggacta aaaactttga
     2221 aaggctatct ttcctttatc tgataactgg taatttggat aaactgtcca aaatgatgaa
     2281 gatcgccgag gtgaaaaatg atgtcatggg tcagttccac aatgcattgt atttgggtga
     2341 tgttcaagaa cgaatcaaga ttttaatcag tgcaggtcat ctaccattag catatgctac
     2401 agctaaaacc catgggttga cccatattgt tgaagacctt gctgataaac ttcaaagtaa
     2461 tgttcctact ttgcccagtg gtaagtctgg ttctcttttg atgccgccga cacctgtcct
     2521 atgtggcgga gactggccgc tactgagggt catgaaaggg atcttcgacg gtagtctcga
     2581 taacgccgga aaaggtggaa atgaggatta tgatgatgct gatgatgcta actgggttga
     2641 ggatttggat atcgatgtag acaacaatca gaatggtgac atcagcattg tgttggatga
     2701 tgaagaagca aacgaagaag aagacgaaga gggtggttgg gatcttgaag atcttgaact
     2761 gccacccgat aatgaaaccc cgaaagctaa tactactcgt tcttctgttt ttgtggcccc
     2821 cactcctggt atgcctgtaa gtcaaatttg ggtgcagaaa tcgtctcttg ctgctgaaca
     2881 tgcagccgct ggaaacttcg acaccgccat gcggttactg agtcgccaac tcggtattaa
     2941 aaatttcaca cctttaaaat ctttctttat cgatctccac atgggaagtc acacttattt
     3001 acgcgctttc tcatctgctc cattaatctc cttggccatc gagaggaatt ggtgtgagtc
     3061 agcaagtcct aatgtccggg ccccaccggc actcgtcttc aatttcaccc aattagaaga
     3121 aaaactcaaa gctggttaca aagcaacaac aaccgggaag tttactgaag cgttgcgtgt
     3181 ttttcttacc attcttcata ccattccttt gattgttgtt gagtcaagaa gagaagttga
     3241 tgaggttaaa gaattgatta ttattgtgaa ggagtatgtt ttgggcttac agatggaact
     3301 taaaagaaga gaattaaaag atgacccggt tcgtcaacaa gaactggcag cttatttcac
     3361 tcactgtaac cttcaattac cacatttgag acttgcattg atgaatgcta tgactatttg
     3421 ttacaaggca cgtaatctaa tcacagcatc aaacttcgcc aggaggcttt tggagactaa
     3481 cccgactgcc gaaaaccaaa ccaaaactgc ccgttcagtt atacaagctg ctgaaaggaa
     3541 catgaatgat gccacacagc tgaattatga ttttagaaat ccgtttgttg tttgtggggc
     3601 cacttatgtt cctatatatc ggggacagaa ggatgtagta tgcccatact gtaattcaca
     3661 ctttgttgtt tcccaggaag gacagctttg tactgtttgt gaccttgcag tggttggatc
     3721 agatgcttct ggcttactat gttcttcagc tcagatccga taattcaaca gtttgggatt
     3781 ctcaagtaga gtggaatatt ttggcttgta gctgatgctt tatgctgcaa tatcagggag
     3841 cttgtgaaag taaactgtag agtagatgat ttagtaaccg ggatgttcat gttggttgct
     3901 ggtcttgtag tatgtggcaa agatacaaca agaaagttac ttggtttcat gaaaaggaat
     3961 gatggttgtt tattcttgaa tttgcttagg attcaatatt aagacatttc gacttatttt
     4021 tgttttcata ttgatgttgg aatttgctga attgggtctg tttaatatat aggcatatgg
     4081 tggtacttgg ttgtttttta caataatatt tcaggacttc atgt
//
LOCUS       XM_071832239             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842061), mRNA.
ACCESSION   XM_071832239
VERSION     XM_071832239.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139842061"
                     /note="uncharacterized LOC139842061; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842061"
     CDS             1..627
                     /gene="LOC139842061"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688340.1"
                     /db_xref="GeneID:139842061"
                     /translation="MERDNEIYEEALSLASAYNPTQVLDVIKFLEEEDEAEGEVVSIP
                     RAPGRHFPRDQEGKSRQLFNDYLSNNPTFPLDRFLRCFRMSRSLFIRICRGIINFNLE
                     PIPYYINYFKQRRDATGLFDFNIFQKCTSAIRQLAYGIAPDAFDEYLHMGESTSYLCL
                     KNFFKSVLHLYSAEYMRRPNAHDVQCLISKHEEIHGFPGMLGSLGCMH"
     misc_feature    517..>624
                     /gene="LOC139842061"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggagcgag ataacgaaat ttatgaagag gcgttatcac tcgcaagtgc atataatcca
       61 acgcaagtac tcgatgtaat taaattttta gaagaagaag atgaagccga aggtgaagtc
      121 gtatcgatac ctagagctcc tggaagacat tttcctagag atcaagaagg aaaatctaga
      181 caactattca acgattatct ttccaacaac cctactttcc cgctcgatag gttcctgcga
      241 tgctttcgta tgagcaggtc tttgtttatc cgtatatgcc gaggtataat caattttaat
      301 ctagaaccta taccctatta tattaactat tttaaacaaa gacgagatgc aaccggttta
      361 ttcgatttta acatttttca aaaatgtacg tccgctataa gacaattagc atatggtatt
      421 gcacccgatg cttttgatga atacttgcac atgggtgaat caacttctta tttatgtttg
      481 aaaaactttt tcaagagtgt tttacactta tattcggcag agtatatgag acggccaaac
      541 gcgcatgatg tgcaatgttt aatttctaaa catgaagaaa tacatggttt tccaggtatg
      601 ttagggagcc tcggttgtat gcattag
//
LOCUS       XM_071832240             384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842062), mRNA.
ACCESSION   XM_071832240
VERSION     XM_071832240.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..384
                     /gene="LOC139842062"
                     /note="uncharacterized LOC139842062; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842062"
     CDS             1..384
                     /gene="LOC139842062"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688341.1"
                     /db_xref="GeneID:139842062"
                     /translation="MLPTDEKEARKVRMKVPMYTLVDGALYRKSFLRPSLLCIGPNQA
                     KKVEVHEGYCTLHSGYRTIAAKVMRIGYYWPTIHKDAAEVMRTCQSCQQHAPINRAPR
                     HPMIPITAAWPFCKWAIDIVSPIIA"
     misc_feature    142..288
                     /gene="LOC139842062"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgctcccta cagacgaaaa ggaagcaaga aaggtacgca tgaaggtgcc catgtacact
       61 ttggtggatg gagctcttta cagaaagtcg ttccttagac cgagcctgct atgtattggt
      121 ccaaatcaag cgaaaaaagt agaagtccat gaagggtatt gcactttgca ctctggctat
      181 cggactatag cagcaaaggt tatgcgcatt gggtattact ggcccaccat tcacaaagat
      241 gcagctgagg tcatgagaac atgtcaatca tgtcaacaac acgcgcccat caatagagca
      301 ccgcgacatc ctatgatacc aataacggca gcttggccat tctgcaagtg ggccatcgac
      361 attgtcagcc caattatcgc gtga
//
LOCUS       XM_071832241             759 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842063), mRNA.
ACCESSION   XM_071832241
VERSION     XM_071832241.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..759
                     /gene="LOC139842063"
                     /note="uncharacterized LOC139842063; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842063"
     CDS             1..759
                     /gene="LOC139842063"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688342.1"
                     /db_xref="GeneID:139842063"
                     /translation="MDANNGILPLAYGIGAGETTDHWTWFFGNLKDSIQSSGCCIDNL
                     TIISDRAPAIAADISIVFPEVFHTLCARHLLGNLKSVYKRVKSYKWHYWKMCKAYSKS
                     DFDHHYGILSRRIPDSTRTLTIVGLNRWYRHYADRVRYTYLTTNSAESMNALSVHARK
                     LPVTILLEFFRASVQQWFWEHRNTADGLTTPVTLYAERKLGKRNRKSLTWTVKPISQV
                     KCEVMDMKKAVNSIYKIKLAHVNNASFSVYIVDM"
     misc_feature    <4..231
                     /gene="LOC139842063"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    <25..459
                     /gene="LOC139842063"
                     /note="IS256 family transposase; Region: transpos_IS256;
                     NF033543"
                     /db_xref="CDD:468074"
ORIGIN      
        1 atggatgcta acaatggaat ccttccatta gcctatggta ttggagcagg agagaccacc
       61 gatcattgga catggttttt tggtaatcta aaagactcta tacagtcttc gggatgttgt
      121 attgataatc ttaccattat atctgacagg gcacctgcaa tagctgctga catatcaatt
      181 gtatttccag aagtatttca tacactatgt gctagacatt tgttgggaaa cctcaaaagt
      241 gtgtataaaa gggttaaaag ttacaagtgg cactactgga aaatgtgcaa agcgtatagc
      301 aaatctgatt ttgatcacca ctatggaata ctatcacgac gtattccaga tagtacacgt
      361 acactcacta ttgttggcct caacagatgg tatagacatt atgcagaccg tgttcggtat
      421 acttacctga ctactaatag tgcagagtcc atgaacgcgc tgtcagttca tgcgaggaaa
      481 ctccctgtta caatacttct tgaattcttt agagcttcag ttcaacaatg gttttgggaa
      541 catcgaaaca ccgctgatgg attaacaaca cctgtcacac tatatgcaga gcgtaagctg
      601 ggtaaaagaa atcgtaagtc tcttacttgg actgtcaaac cgatatcaca agttaagtgt
      661 gaggtaatgg atatgaaaaa ggcggtaaat tcaatctaca agataaaact tgcacatgta
      721 aacaatgcca gtttttcggt ctacattgtg gacatgtaa
//
LOCUS       XM_071832242            2644 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842064), mRNA.
ACCESSION   XM_071832242
VERSION     XM_071832242.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2644
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2644
                     /gene="LOC139842064"
                     /note="uncharacterized LOC139842064; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842064"
     CDS             1..2409
                     /gene="LOC139842064"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688343.1"
                     /db_xref="GeneID:139842064"
                     /translation="MSWIKSAMQKAVELPGGVIKAAVRTYTENVIHHAGNSVADAAKM
                     FHVDRFVTQKIQSFSDAATSLEEVSVSCKGEERVELLRSWLVALREFERVDENYVEND
                     RKSLEDPRTLTDKNVTPGNSATMILYYDSDLGSVPMKFRDVFLQSQALEGMTMSMILQ
                     EPNEEEIFLLREIFRLCLTRGKGVHDVLVEKIHDLAKTFSVYGDEMLVKKDQLLQFAQ
                     TAITGLKETADVASLDSEISQIQQSLNGMKCQRSVITGHVDSSESATNASSKVILLFL
                     WKLLFNRIFGSIKVLIIKFWKKKKREDKQLILMQETEEYVAQIQLCCRLKSLLLQKRL
                     LTKGDTPETHTKKVDKLKLLYESLHNSAYKTEKRISEHRVQKEEIVIFREARTGELSQ
                     IEKDLEAEIRVIEKKRDKLEAELREVNNTLAAANARLQDAREERLQFDQDNNEFLLNS
                     NEKEDELSKTIISYKAEADTCSAFINFLEATWAFQSSFAKQKDKQVNDQLQTHEAYFV
                     NATIRFLSTYKEQLEPTVDNLRKLIKGLKGYRYVIDPDEEFLQDIEQREDLEQEYLDA
                     EAKVIKIFDAVESIKELFYSAIDDTSRKGVEMVNELCDDIEKIKCDFKTIRRPILRIE
                     IPTDEEFSTATGSPQAVGTPSSSSGRVMQDLTSVFSQKLLIKFPRQKPYIPLGGSPEN
                     SPFSPMENDTKSAENSPLSTMEDDFKSAEYKQHKLEVLESEKPSQFDKYLSDVALKVE
                     NKTIKMMSSGHHNEGSEQLTVPVTQERKMQPQGTLDDETELVESVLNQEIGMNTETQK
                     VDME"
     misc_feature    1063..>1827
                     /gene="LOC139842064"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
ORIGIN      
        1 atgtcatgga taaaatctgc aatgcaaaaa gctgtcgaat tacctggcgg cgtgatcaaa
       61 gctgctgtcc gtacttacac cgaaaacgtc attcatcacg ctggaaactc tgttgccgat
      121 gccgctaaga tgtttcacgt tgaccgtttt gttactcaga aaatacaaag ctttagtgat
      181 gcagctacaa gtcttgaaga agtttcggtt tcttgtaaag gggaagaaag agtagagttg
      241 ttaagaagtt ggttagttgc tctacgagaa ttcgaaagag tagatgaaaa ttatgttgag
      301 aacgatagaa aaagtttaga ggatcctcga acgttaactg ataagaatgt tacgcctggc
      361 aactctgcaa ctatgattct atactatgac tctgatcttg gtagtgtacc aatgaaattt
      421 cgtgatgttt tccttcagag tcaagctctc gaaggcatga caatgtccat gattcttcag
      481 gaaccaaatg aggaagaaat ttttttattg cgcgaaatat ttaggttgtg tctaacaaga
      541 gggaagggag ttcatgatgt tctggtcgaa aagatacacg atcttgccaa aacattctca
      601 gtttacggtg atgagatgct ggtaaagaaa gatcaattgc ttcaatttgc tcaaactgca
      661 attactggac tgaaagaaac tgctgacgtg gcaagtctag attctgaaat ctcacaaata
      721 caacaaagct tgaacggaat gaaatgccaa agatctgtaa ttacgggcca tgtggattct
      781 tctgaatcag caaccaatgc atcatcaaag gtgatcctat tattcttatg gaaactcctg
      841 ttcaatagaa tttttgggag tattaaagtg ctgattatca agttttggaa gaagaaaaaa
      901 agagaagata aacagttaat tttgatgcag gaaacagaag aatatgttgc ccagatccaa
      961 ttgtgttgca gactaaagtc tcttttatta cagaaaagat tgttgactaa aggggataca
     1021 ccagagactc atactaagaa agtggataaa ttgaaacttc tatatgaatc tctgcataac
     1081 tcagcctaca aaactgaaaa gagaatttca gagcataggg tacagaaaga ggaaattgtt
     1141 attttcagag aagcaagaac cggtgaactc agccaaatcg agaaggattt ggaagctgaa
     1201 attagagtga ttgaaaagaa aagagacaaa cttgaagcag aactacgaga ggttaataac
     1261 acattggctg ctgcaaatgc tcgtctccaa gatgcaaggg aagaacgact acagttcgat
     1321 caggataata acgagtttct tctaaactct aacgaaaagg aagatgaact ctcaaaaaca
     1381 attatttcat ataaagcaga agctgataca tgcagtgcat ttatcaactt tctggaagct
     1441 acttgggctt ttcagtcctc atttgcgaag caaaaagaca agcaagtcaa tgatcaattg
     1501 cagacccatg aagcttactt tgtgaacgcg acgataagat ttttgtctac atacaaggag
     1561 caactagagc ctactgtcga caatctgagg aagcttataa agggtttgaa agggtatcgg
     1621 tatgtaatag atccggacga agaatttttg caagatatcg agcaaaggga agatcttgag
     1681 caggaatatt tggatgctga agccaaggtt ataaaaatat tcgatgcagt cgagagcatt
     1741 aaagagctct tttatagcgc gatcgacgac acttctagga aaggtgttga aatggttaac
     1801 gagctatgcg atgatatcga aaagattaaa tgcgacttca aaaccattag aaggccaatt
     1861 ttgaggattg agattccaac cgatgaagag ttctcaacag caacagggag tcctcaagca
     1921 gttggaacac catcttcatc ttctggacgc gtaatgcaag atcttacgtc tgttttttct
     1981 cagaaattgt taatcaagtt tcctagacaa aaaccatata tccccttagg tggatcccca
     2041 gaaaactcac ctttttcacc aatggagaat gatactaaat cagcagaaaa ctctccatta
     2101 tcaaccatgg aggatgattt taaatcagca gaatacaagc aacataaatt ggaagttttg
     2161 gaatctgaaa agccatcaca gtttgataaa tatctgtcag atgtcgcctt aaaagttgag
     2221 aataaaacta taaaaatgat gtcatcaggc catcataatg agggttcgga gcagttaacg
     2281 gtaccagtga ctcaagaaag aaaaatgcaa ccacagggta cattagacga tgagacggaa
     2341 ttagtagagt cagttttaaa tcaagaaata ggtatgaaca ctgagacaca aaaggtggat
     2401 atggaataac atccaaagct tctttagcta atgaacaaaa gttactggag tagagaaggt
     2461 gaaaatgggc gggtcgggaa ggttggaata atggatcaat acgtgacacc accatattta
     2521 attcgatgat gtgtcgtcta tatatgtgga tgtcaatgga cgaataatat ctttattgaa
     2581 cttttttaaa tcagaataca ttttagtcgc caaattgaaa tcatgacatg agcatagtgg
     2641 aaac
//
LOCUS       XM_071832243            2731 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidate phosphatase
            PAH1-like (LOC139842066), mRNA.
ACCESSION   XM_071832243
VERSION     XM_071832243.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2731
                     /gene="LOC139842066"
                     /note="phosphatidate phosphatase PAH1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 Proteins"
                     /db_xref="GeneID:139842066"
     CDS             99..2477
                     /gene="LOC139842066"
                     /codon_start=1
                     /product="phosphatidate phosphatase PAH1-like"
                     /protein_id="XP_071688344.1"
                     /db_xref="GeneID:139842066"
                     /translation="MSRLGGAISRFHPFGGAVDIIVVQQQDGSFRTTPWYVRFGKFQG
                     VLKGAETTVKIEVNSVEADFHMHLDNSGEAYFIKEVVTEKENNVNESERLFESKEDDF
                     SSEKNKNVEVQLRDDQAESTESDSEKRFYEFQDEQSSSFAESIDLYDNVEGDTESHNS
                     EVVLLSIDGQTLSAPITSLEKNTENVQLSTPQFHLGPVETPEIGNGLEFSDESTWAHY
                     LSDFNETKDIGSDNKVNVERELSIKSLVEDAPSYVKKEDVFKSDDREVDVNNVGSLNL
                     EVENGGVGNDESSNLEVKIDEVVEKAEFLNLEVKIDEGVENAESSYLEVKTESSRMTS
                     PDMEIKLSDTEIVKDEDHEESEWVENSSNGPEIGDTIMNGNERLDGPRRRVFELSLCG
                     NLLRPGMGLSTAVDTFNTHRIHEEQFRDAASSIIKNDNLIVKIEDKYFTWEKAAHIVL
                     GSAAYGLELPVETRDAIHVECSGPSDDTGLRSTPSRGWRLWPFRRVNTLEHNLSNLSG
                     EDVFLDSEAVFDSSQPVETTSAPSQSPKKQFVRTYVPTTEQISSLNLKDGQNMVSFIF
                     STRVLGVQKVDAHIYLWQWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQTGVATLF
                     SAIKENGYQLMFLSARAIVQAYLTRSYLLNLKQDGKALPNGPVVTSPDGLFLSLFREV
                     IRRAPHEFKIACLEDIKSLFPDDYNPFYAGFGNRDTDELSYRKIGIPKEKIFIINPKG
                     EVAVSHRMDMKGKSYTSLHTLVDDMFPPTSMREQESFNSWNYWRIPLPDIGL"
     misc_feature    105..353
                     /gene="LOC139842066"
                     /note="lipin, N-terminal conserved region; Region:
                     Lipin_N; pfam04571"
                     /db_xref="CDD:461356"
     misc_feature    1254..1571
                     /gene="LOC139842066"
                     /note="Lipin/Ned1/Smp2 multi-domain protein middle domain;
                     Region: Lipin_mid; pfam16876"
                     /db_xref="CDD:465292"
     misc_feature    1719..2399
                     /gene="LOC139842066"
                     /note="LNS2 (Lipin/Ned1/Smp2); Region: LNS2; pfam08235"
                     /db_xref="CDD:462403"
ORIGIN      
        1 ggttcatggt tcgaaaaact gacggttttt tgatgaaccg aattcagaag ccaacaatca
       61 tttaagtttt gactttggaa taaaatataa cccagattat gagtagactt ggaggtgcca
      121 tttctcgttt tcatcctttt ggtggggccg ttgatataat tgttgttcaa caacaagatg
      181 gatcttttag aactaccccg tggtacgtta gattcggtaa atttcaaggt gttcttaaag
      241 gtgctgaaac aactgtaaaa atagaagtta atagtgtaga agctgatttc catatgcatc
      301 ttgataattc gggtgaagct tattttatca aagaggttgt caccgaaaaa gaaaataatg
      361 taaatgaatc cgagaggtta tttgaatcta aagaagatga tttttcgtct gagaaaaaca
      421 aaaatgttga ggttcagctt cgtgatgatc aagcagaaag tacagaatct gatagtgaaa
      481 agagatttta tgaatttcaa gatgaacaat catcgtcttt tgctgaatcg atcgatttgt
      541 atgataatgt agaaggtgat actgaatcac ataattcgga agtggtttta ttgagcattg
      601 atggtcaaac tttgtcagca ccgataacat cactggaaaa aaatacagaa aatgttcaac
      661 tgagtacacc acagtttcat ttgggcccag ttgaaacccc ggaaattgga aatggtttgg
      721 aatttagtga tgaatctact tgggctcatt atttaagtga ttttaatgaa acaaaagata
      781 taggcagtga taataaagtg aatgtagagc gagagttatc gataaaaagt ttggttgaag
      841 atgcaccaag ttatgtaaag aaagaggatg tttttaaaag cgatgatcgt gaagtagatg
      901 tcaacaatgt tggatcttta aatcttgagg ttgaaaatgg gggggttgga aacgatgaat
      961 cttcaaattt ggaggttaaa attgatgaag tggttgaaaa ggcggaattt ttaaatttag
     1021 aggttaaaat tgatgaaggg gttgaaaatg cagaatcttc gtatttagag gttaaaactg
     1081 agtcttcaag gatgacttca ccggatatgg aaattaaact ttctgatact gaaattgtta
     1141 aagatgaaga ccatgaagaa tctgaatggg tcgaaaatag ttcaaatggg ccagaaattg
     1201 gagatactat aatgaatggt aatgaacgtt tggatgggcc aagacgaaga gtttttgagt
     1261 tatctctttg tgggaactta cttcgacctg gcatgggatt aagtacagct gttgacactt
     1321 tcaacaccca ccgcatacac gaggaacaat ttcgagacgc tgcatcatca atcatcaaaa
     1381 acgataactt aatagtcaaa atcgaagata aatactttac gtgggaaaaa gctgctcata
     1441 ttgtccttgg atcggctgca tatggtttag aattgcccgt tgagacccgt gatgcgattc
     1501 acgtggagtg tagtgggccc agtgacgata ctgggctccg ttcaactcca tcacgcggat
     1561 ggagattatg gccttttaga cgggtcaata cacttgagca taatttaagt aacctttcgg
     1621 gtgaagacgt ttttcttgat tctgaagcgg tgtttgactc ctcacaaccg gtagaaacaa
     1681 catcagcgcc tagtcagtct ccgaagaagc aatttgttag gacatatgtt cccactactg
     1741 agcaaatctc gtcgttgaat ttaaaagatg ggcaaaatat ggtgtcgttt attttctcga
     1801 ctagagtttt aggagttcaa aaggtggatg ctcatattta cttgtggcaa tggaatgcaa
     1861 gaattgtgat ttcggatgtt gatgggacga tcacgaagtc tgatgttctt ggtcaattca
     1921 tgccgttagt tgggaaggat tggactcaaa ctggtgtagc tacactcttt tctgctataa
     1981 aggaaaacgg atatcaacta atgtttctaa gtgctcgtgc aattgttcaa gcgtatctga
     2041 ctaggagtta tcttcttaat ctcaagcagg atgggaaagc tttaccgaat ggcccagttg
     2101 ttacttcacc cgatggctta ttcttgtcgt tgtttcgaga agttattaga agagctcctc
     2161 atgagtttaa gattgcgtgt ttagaagaca taaaatctct ttttccagat gattacaatc
     2221 cgttttatgc gggtttcggt aacagagaca cagatgaact tagttacagg aaaataggga
     2281 ttcctaaaga aaaaatcttt atcattaacc ctaagggtga ggtagcagtt agtcatcgta
     2341 tggacatgaa gggcaagtct tacacttctt tgcacacatt agtcgacgac atgtttcccc
     2401 ctacatcaat gcgtgagcag gaaagtttca actcgtggaa ttattggagg ataccattgc
     2461 cagatattgg cttgtaatag tttcacacac cgaaccagtt ctgaaatgtt agactatcgt
     2521 taaatatgag atcacggcaa ctgacatggg taatattgtt gatgagctta tattttgagc
     2581 ttgtgagtga tggatcgagc ttttgttctc tttcaggctc tcaggtgttt tcgcatcctt
     2641 actggtgtaa ttatgttgag cattaattca tacgctaaac taatatttgt aaattgacat
     2701 tagttgatgc agtcacttgt atatttgttt g
//
LOCUS       XM_071832244            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842067), mRNA.
ACCESSION   XM_071832244
VERSION     XM_071832244.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139842067"
                     /note="uncharacterized LOC139842067; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842067"
     CDS             1..1089
                     /gene="LOC139842067"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688345.1"
                     /db_xref="GeneID:139842067"
                     /translation="MSVRLVIQEVTYTVISAYAPHAGLGEAEKRYFWESLDEVVRMCP
                     PDHRLLIGGDLNGHIGTDVEGYTRVHGGFGYGVRNAEGCSILKFAVAHELVVANSFFR
                     KTVAQLATFHSGGHSTQIDFLLILRGDLRTCRDCKVLTDLTCSSQHRLLVMDLVFQRR
                     ATKSVRPVKPKILWKKLNGEKAETFKTSVVEKIGAEVETVSLDNADQMWNRLASTTRE
                     VAKEALGVAVGTSRGHKYDRESWWLSDEVQIKVVLKQLRFREPITCREGTAVDRTRAE
                     ERYKEAKREAKKAVARAKEKAYEDLYRKLDSKEGVNDIYKITKARDRKRRDLDSIKFI
                     KDEAGQTLVKDDEIRKRWEGTTPEQHGL"
     misc_feature    <1..465
                     /gene="LOC139842067"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(52..54,166..168,442..444)
                     /gene="LOC139842067"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtcggtta ggttagtaat ccaggaggtg acctacacgg tcattagcgc ttacgcacca
       61 catgcgggcc tgggagaagc ggaaaagcga tacttttggg aatcgttaga cgaggttgtg
      121 agaatgtgcc ccccggacca tcgattactt attggtggag atcttaatgg ccatattgga
      181 acagatgttg agggttatac gagagtccat gggggctttg ggtacggagt tagaaatgcg
      241 gaagggtgtt ctattctcaa atttgctgta gctcatgagt tagttgtggc gaattcgttt
      301 ttcaggaaga ctgttgcgca gttagcaact ttccacagcg ggggtcatag tacccagatt
      361 gactttttgt tgattctcag aggggatctt aggacatgta gagactgtaa ggtcctgact
      421 gacttaactt gctcctccca acatagattg ttggtcatgg atttggtttt ccagagacgg
      481 gccaccaaga gtgtgaggcc cgtcaaacct aaaatcctgt ggaagaagtt gaacggggag
      541 aaggcagaga cttttaaaac ttcggttgtt gagaaaattg gtgcagaagt tgaaacggta
      601 tcccttgata acgcggatca gatgtggaat cggctggcat ctaccactag agaggtagcc
      661 aaggaagcct tgggtgtggc agtaggaaca tcgagaggac ataagtatga tagagaatca
      721 tggtggctta gtgacgaggt tcaaatcaaa gtcgtgctta agcaacttag gtttagggag
      781 cccatcacct gtcgggaggg gactgcggtg gatagaacta gggccgaaga gagatataaa
      841 gaagccaaaa gagaagctaa gaaggctgta gcccgcgcaa aggaaaaggc atacgaagat
      901 ttgtacagga aactagactc caaagaggga gtaaacgata tctacaagat aactaaagct
      961 agggatcgaa agcgcaggga tctagatagc atcaagttta tcaaagatga agctggtcaa
     1021 accttagtaa aggatgacga aattaggaaa cgatgggaag gaacaacccc agaacaacat
     1081 ggattgtga
//
LOCUS       XM_071832245            1908 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842068), mRNA.
ACCESSION   XM_071832245
VERSION     XM_071832245.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1908
                     /gene="LOC139842068"
                     /note="uncharacterized LOC139842068; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842068"
     CDS             1..1908
                     /gene="LOC139842068"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688346.1"
                     /db_xref="GeneID:139842068"
                     /translation="MADDDFEGNGTKVTQVSDLDFSNPLYLHSSDTSITALISLKLEG
                     TENYNVWSRAMLLALQTKNKSGFIDGQVFSKFAKTVWDELKETYDKIDESITFNLHKK
                     INTISQNGDSLSDYYHKLNALWKQFDALVKLPSCGCANTEFKSHNDLIKLMQFLMGLD
                     DCYQAVRSNILTKETLSFVQTTFSIAFREESHINSSSVSSSGSALKSQQSAFLVCYEI
                     VGYPSGWVKRNNNNTNRNVTSNNVVSTSNNQGSAFTSDQNNKLMSLINDTSVTGSAQA
                     NVAGMIVGHPNGTQALITKIGDLTLNDNNTLSNVLVVLGYRVNLPSVHQLSKNKRIFV
                     GFNDSKCYIHDLLEKRIVGTGSVKNGLYLFDVFEGDYSNCVTKCYVSFNLWHCRLGHP
                     IKRVLNLLKHDLEWSGDSNDHICDTCHKAKKTREPFPLSDHKSTALGDLIHLELWGPY
                     KITSRDVYKYFLTVVDDFSRAVWVYRLKFKSDVFDMFEMFSNLLLNLSDKYVKIIRSD
                     NEIGFVNSKFDLFCKNKGIVNQTTCAYTPQQNGIAKRKHRHLLNVARASVNPNDDERT
                     NDGAGDGTDHSSHEDSSSRSSDSDHINHEESSSGGSDTTSAQEEETSIPEGITGGNFN
                     EHTDSVNDEEP"
     misc_feature    82..210
                     /gene="LOC139842068"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    229..540
                     /gene="LOC139842068"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    1078..1266
                     /gene="LOC139842068"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1339..1611
                     /gene="LOC139842068"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atggctgatg atgattttga aggaaatgga accaaggtca ctcaagtgag tgatcttgat
       61 tttagtaatc cactttactt gcatagcagt gatactagta ttactgccct tatttccttg
      121 aaattagaag gaacagaaaa ttacaatgtc tggagtagag ctatgctatt agctctacaa
      181 actaaaaata aatctggttt tattgatggt caagtttttt ctaaatttgc taaaactgta
      241 tgggatgagt taaaagaaac ttatgacaag atagatgagt caatcacttt taatttgcac
      301 aaaaagatta atacaatttc tcaaaatggt gattcattat ctgactacta tcataagtta
      361 aatgctttat ggaaacagtt tgatgctctt gttaaattgc cttcttgtgg ttgtgctaat
      421 actgagttta aaagtcataa tgatttaatt aaacttatgc aattcttaat gggcctggat
      481 gattgttatc aagctgttag gagcaatatt ttgaccaaag agaccctttc ctttgttcaa
      541 actacttttt ctattgcgtt tagagaagaa tctcacataa attcttcttc tgtttcctct
      601 tctggtagtg ctttaaagtc acaacagtct gcttttcttg tgtgttatga aattgtgggt
      661 tatccttctg gttgggttaa aagaaataat aataatacaa ataggaatgt tactagtaac
      721 aatgttgtgt ctacttctaa taaccaggga tcagccttta cctctgatca aaataacaag
      781 cttatgagct tgatcaatga tacatctgtc actggaagtg cccaagctaa tgttgcagga
      841 atgattgttg gtcatcctaa tggtactcaa gctttgatta ccaagattgg tgatttaact
      901 ctaaatgata acaatacctt atcaaatgtg ttggttgttc ttggataccg tgttaatctt
      961 ccttctgttc atcagctttc aaaaaataaa agaatatttg ttggttttaa tgactctaaa
     1021 tgctacattc atgacttatt ggaaaagagg attgtaggga ctggtagtgt aaagaatgga
     1081 ttatacttgt ttgatgtgtt tgaaggtgat tattccaact gtgtgactaa gtgctatgtg
     1141 tcttttaatc tgtggcactg caggcttgga catcctatta agcgagttct taatctgtta
     1201 aaacatgatc tagagtggag tggtgattct aatgatcaca tttgtgatac ttgccataag
     1261 gcaaagaaaa ctagggagcc ttttccctta agtgatcaca aatccactgc tttaggtgac
     1321 ctaatacatt tggagttgtg gggtccatat aagatcactt ctagagatgt gtataagtat
     1381 tttctcactg tggtggatga cttctctaga gctgtgtggg tttatcgact taagttcaaa
     1441 agtgatgtgt ttgatatgtt tgaaatgttt tctaacttgc ttttaaattt atctgataaa
     1501 tatgttaaga taataaggtc tgataatgag attggatttg taaatagcaa gtttgacttg
     1561 ttttgtaaaa acaaagggat tgtcaatcaa accacttgtg cttatactcc tcagcaaaat
     1621 ggcattgcta agagaaagca tagacattta cttaatgttg ctagggcttc tgtaaacccc
     1681 aatgatgatg agagaacaaa tgatggtgca ggagatggca ctgatcacag cagccatgaa
     1741 gactcctcat ctagaagcag tgatagtgat cacatcaacc atgaagagtc ttcatctgga
     1801 ggtagtgata ccacctctgc acaagaagaa gaaacttcta tacctgaggg cattactggt
     1861 ggtaatttta atgaacatac tgatagtgtc aatgatgagg aaccctaa
//
LOCUS       XM_071832246            1191 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At1g57790-like (LOC139842069), mRNA.
ACCESSION   XM_071832246
VERSION     XM_071832246.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1191
                     /gene="LOC139842069"
                     /note="F-box/kelch-repeat protein At1g57790-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842069"
     CDS             1..1191
                     /gene="LOC139842069"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At1g57790-like"
                     /protein_id="XP_071688347.1"
                     /db_xref="GeneID:139842069"
                     /translation="MSPIQHTDLSPTSYAIWSMPGCRLEGDYGEIKCDVESKQEEDNE
                     YEVLVVNDERVFSFPFHVLELIMKFFVDIDYLNLRATCKQLGALPVIRWSNITEILRL
                     RTYSLVSPWSMVLDTNRGIITITDPMLGNKYFIKPSQELVGDLLQIHCSAMGWLLMSN
                     NTSDLMFFNPFTSDILKLPHLGTPHVDKFCFSAPPTSPGCMVFGLGSDRARIHFVGRE
                     QSWRTLQFSRVHSKPFRFQTFFGRDIYALNHQKLIVFRRDDFLQQRVVSYVPYNCHKP
                     STKYYLTKSNQHLLLVSVDVFEKSVEVHKWNQSTSKFEKLKSLGKDVIYVSETTCLCT
                     EATTPKMENKVYFHQAYSENDTLLFYSLETGRFHALDDDNMQGSYGDLFKHKRLLRPH
                     TWIC"
ORIGIN      
        1 atgtctccta tacaacatac agatttatca ccaacaagct atgctatttg gtctatgcct
       61 ggatgcaggt tggagggtga ttatggagaa atcaagtgcg atgttgaatc taaacaagaa
      121 gaggacaatg aatatgaagt tttggtggtc aatgatgagc gcgtttttag ttttccgttt
      181 catgtcttgg agttgattat gaagtttttt gttgatatcg actacctcaa cttgcgtgca
      241 acatgcaagc agttaggagc actacctgtc attcgatgga gcaacataac agaaatatta
      301 agattgcgga catattcctt agtatcacca tggtcgatgg tcttagacac aaataggggc
      361 attataacta ttactgatcc aatgttgggt aacaaatact tcataaaacc atcacaagaa
      421 cttgttggtg atcttctcca aattcattgt tcggcgatgg gctggttgtt gatgtctaat
      481 aacacatcag acttaatgtt ctttaacccc tttacaagtg atatactcaa gcttccacac
      541 ttaggcactc ctcatgtaga taaattctgt ttctctgcac cgcctacttc ccctggttgt
      601 atggtttttg gactcggaag tgatcgcgct cgcatccact ttgttggtcg agaacaatcc
      661 tggcgtactc tgcaattttc cagagttcat tcaaaaccgt ttcgttttca aacatttttt
      721 ggccgagata tttatgcttt gaaccaccaa aaacttattg ttttcagacg tgatgatttt
      781 ttacagcaac gtgttgtgag ctacgttcca tataactgtc ataagccttc tacgaaatat
      841 tacctaacga aatctaatca acatctttta ctagtttccg ttgatgtttt tgaaaaatcc
      901 gttgaagtac acaagtggaa tcaatctaca tcgaaatttg agaaactaaa gagcttggga
      961 aaagatgtga tttatgttag tgaaacaaca tgtttatgca ccgaagctac aacaccaaaa
     1021 atggagaaca aagtctactt tcatcaggca tattcagaaa acgacacctt acttttctat
     1081 tctcttgaaa cgggaaggtt tcacgcattg gacgacgaca acatgcaagg aagttacggg
     1141 gatttattca agcataaacg acttttacgc cctcatacct ggatttgttg a
//
LOCUS       XM_071832247            1308 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842070), mRNA.
ACCESSION   XM_071832247
VERSION     XM_071832247.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1308
                     /gene="LOC139842070"
                     /note="uncharacterized LOC139842070; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842070"
     CDS             1..1308
                     /gene="LOC139842070"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688348.1"
                     /db_xref="GeneID:139842070"
                     /translation="MSSVSDFSTDQVFNSREELTEWVKNEARSHSQVIVIRRSKEKKG
                     YVVKIEYACERGGVSRSKSTPEKSKPCKKIDCKFKMVAKFSKTTGVWSIKMKNSVHNH
                     ERIMYMEGHAYAARLTNDEWRLVADLSSKNVRTGEILATLKKQNPENVSSSKTVYNAK
                     AKLRTIFQANRTPIQVVMSFLKEKGAIEKIHAELGRFNKFEITDENCGCQLRSCFGLP
                     CAHEQAIYLNAAKKKASLNRQQEPARHSSYAQDRFGIPDLNQEPSRHSSYVHQTFFSP
                     IPLLNQIPEMFRPYVTNIHNVEGDGNCGFRSVASSLGLHENRWPQIRMELLEEIITHK
                     EIYADLFGEGELFQLYQTINLPQDASAIRKYWMTLPDMGFLIASRYNVVLLCLSNEAD
                     TTCLPLWSSPPESQQHDICVIAREIKRTFVSGVRIAEAREGVL"
     misc_feature    37..309
                     /gene="LOC139842070"
                     /note="Transcription factor AFT; Region: AFT; pfam08731"
                     /db_xref="CDD:400877"
     misc_feature    880..1239
                     /gene="LOC139842070"
                     /note="OTU (ovarian tumor) domain family; Region: OTU;
                     cd22744"
                     /db_xref="CDD:438581"
ORIGIN      
        1 atgtcaagtg tatcagattt ttcaactgat caggtgttca atagtcgtga agagttgacc
       61 gaatgggtaa aaaatgaagc acgttctcat agccaagtta ttgtcatcag aagatcaaaa
      121 gaaaaaaagg gttacgtagt caagattgaa tatgcgtgtg agcgtggcgg tgtatccaga
      181 agtaaatcaa ccccggaaaa aagtaaaccg tgtaaaaaaa ttgactgtaa atttaaaatg
      241 gtagcaaagt tttcaaagac aactggtgtt tggtcgataa aaatgaaaaa ttcagtacat
      301 aaccatgaac gtataatgta tatggaaggt catgcttatg cagcgcgatt gactaacgat
      361 gaatggcgtt tagtcgcgga tttatcaagt aaaaatgtaa ggactggtga aattcttgcg
      421 acattgaaga agcagaatcc ggaaaatgtt tcttcaagca aaacggtgta taatgcaaaa
      481 gcaaaacttc gcacaatatt tcaagcaaac aggactccta tacaggtagt aatgtcattt
      541 ttgaaggaaa aaggtgctat agaaaaaatt catgctgagc ttgggcgttt caacaagttt
      601 gaaataacag atgagaattg tggttgtcag ctaagatcgt gttttgggct accatgtgcg
      661 cacgaacaag caatttattt aaatgcagca aaaaaaaagg catcattgaa ccgacaacaa
      721 gaacctgcca gacatagttc ttacgcacaa gatcgattcg gtataccgga cttgaaccaa
      781 gaaccttcaa gacatagttc ttatgtacac caaacatttt tctcgcctat cccattatta
      841 aatcaaattc cagaaatgtt tcgaccgtac gtaacgaaca tacacaatgt agaaggtgat
      901 gggaattgcg gatttagatc ggtagcttca tctctcggtc ttcatgaaaa tcgttggcca
      961 caaattagga tggagttgct tgaagagata ataacgcata aagaaatata cgctgatctg
     1021 tttggagaag gtgaattgtt ccaactttat cagacgatca atcttccaca agatgctagt
     1081 gcaattcgga agtattggat gactttgcca gatatgggtt ttctaattgc ttcaaggtac
     1141 aatgtagttt tgctatgttt gagcaacgaa gcagatacaa catgtttacc actttggagc
     1201 agtccacccg agtcacaaca acatgatata tgtgtaattg ctcgcgaaat aaaaaggact
     1261 tttgtgtcag gagtcagaat tgcagaggct agggagggtg tcctctaa
//
LOCUS       XM_071832248             990 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842071), mRNA.
ACCESSION   XM_071832248
VERSION     XM_071832248.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..990
                     /gene="LOC139842071"
                     /note="uncharacterized LOC139842071; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842071"
     CDS             1..990
                     /gene="LOC139842071"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688349.1"
                     /db_xref="GeneID:139842071"
                     /translation="MCNVKKTTQIATLLQNTNLIAWDEALMNDKRCFEALDRSLRDIL
                     GNTEEFFGGKSVILGGNFKQTLPIQTKGGKSAILGACITTSHLWQRFKGPLNSRWVQI
                     PDQFCIPDDENGLANLISFIYPRESLQNPSAVDLQQKAIVCPKNDAADTINSLIIDMV
                     DGPVTTYCSYDTTTPHGNDGGEVELLYPAEYLNTLNYHGLPLHELHLKKGVPAILLRN
                     INIAGGLCNGTQMIITKMLAKSVEAKIITGTRVGEKVFSPRMSLIHKEPTLPLILKRQ
                     QFPLKISYAMTKQKPGSIAQPNWSLSTETSIRSRAALCCAAESYITGRFETAN"
     misc_feature    <1..702
                     /gene="LOC139842071"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atgtgcaacg ttaagaaaac tacccagata gcgacattac tgcagaacac aaaccttatt
       61 gcatgggatg aggcgctaat gaatgataag cgctgttttg aagctcttga taggagcctt
      121 cgagatattt taggaaacac tgaagaattt tttgggggta agtctgtgat acttggtggt
      181 aactttaaac aaacattacc tattcagaca aaaggaggga aatcagctat ccttggtgct
      241 tgtattacga cttcacattt gtggcagcga ttcaagggcc cattgaatag tcgttgggta
      301 caaatccctg atcagttctg tattcctgat gatgaaaatg gattggcaaa tcttatttct
      361 tttatttacc ctcgtgaatc gctgcaaaat ccatccgcag tcgacctgca gcaaaaagca
      421 attgtctgtc ccaagaacga cgcagccgat acgataaaca gcttaatcat cgatatggtt
      481 gatggtccag ttacaactta ctgcagctac gacactacaa ctccacatgg aaatgacggt
      541 ggtgaggtgg agttgctcta tcctgcagaa tatctaaata cgctgaacta ccatgggttg
      601 ccactgcatg agctgcattt aaaaaagggt gtaccagcca ttctgcttcg caacattaat
      661 atagcaggtg ggctttgtaa tggcacccaa atgataatta cgaagatgtt agccaagtca
      721 gtggaagcta aaattattac gggcacccgc gtcggtgaaa aggtcttttc cccaagaatg
      781 agccttatcc acaaggaacc aacgttgccg ttgattctga agaggcaaca attcccgtta
      841 aaaatctcat atgcgatgac taaacaaaag ccagggtcaa tcgctcaacc aaattggagt
      901 ttatctaccg aaacctctat tcggtcacgg gcagctctat gttgcgctgc tgagagctac
      961 atcaccgggc ggtttgaaac tgctaattaa
//
LOCUS       XM_071832249             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842072), mRNA.
ACCESSION   XM_071832249
VERSION     XM_071832249.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139842072"
                     /note="uncharacterized LOC139842072; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842072"
     CDS             1..501
                     /gene="LOC139842072"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688350.1"
                     /db_xref="GeneID:139842072"
                     /translation="MNGMFEARDPAMQKYLKLAEEMANKFELFSITQVPRSMNKKVDA
                     LSKLATSVFSHFTKDVWVEVLSQKSTDVVQEVAPNEEVETWMSPITTYLKHGMLPING
                     AAARKIRMKAPSYTLRDGILVKKSFTAQLLKCVSPNEAKIIVREVHEGTCGMHAGFRT
                     VEGKKM"
     misc_feature    <1..147
                     /gene="LOC139842072"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgaacggga tgtttgaagc tagggatccg gccatgcaaa aatatctgaa attggcagaa
       61 gagatggcca acaaatttga acttttctca atcacgcaag tacctcggtc catgaataaa
      121 aaggtcgacg cactcagcaa actcgcaacg agcgtattca gtcacttcac caaggacgtt
      181 tgggtggagg tcctaagtca aaaatccact gacgtggtac aggaagtggc ccccaatgag
      241 gaggttgaga catggatgag tccaatcact acgtatctca agcacgggat gctgccaatt
      301 aatggggcag cggcaagaaa gattcgtatg aaagcaccct cgtacacact aagggatggt
      361 attctggtca agaaatcctt taccgcacag ctactaaaat gcgtcagtcc gaatgaggcg
      421 aaaataattg taagggaagt acatgagggg acttgtggca tgcacgcagg gtttaggacc
      481 gttgaaggga agaaaatgtg a
//
LOCUS       XM_071832250            1170 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842073), mRNA.
ACCESSION   XM_071832250
VERSION     XM_071832250.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1170
                     /gene="LOC139842073"
                     /note="uncharacterized LOC139842073; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842073"
     CDS             1..1170
                     /gene="LOC139842073"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688351.1"
                     /db_xref="GeneID:139842073"
                     /translation="MEDTAGIDIEFITSNAVNNVNISQSNDLTATVSSPSTLTDNRSS
                     GLVNETSYEPIGTVEIVADKLAIDETDEKPNLIKTPEPDFENTAAKDLEIKTSDVAND
                     KVLPQNDNLIISVSSPSTLTDNQSAGLVTDEKLKAVDEETDEKPKPADEETDPKPAVE
                     IDADKSAIKDTDEMPKPTVEIDAKKSAIEETDEKPKPADEEIDEKLKPADEETDPKPA
                     VEIDADKSAIDEADEKPKPTDEEINEKPKPADEETDSKPAVEIDVVQSAIEETDEKPK
                     PAVEIDADKSAIEETDEKPKPTVEIDAVKLATKETVENPKPAVEIDVVKSAIKETDEK
                     PKLIETPEPDMEDTAAKDIKIKTSNAANEEVLTQNVDTVVVSSPSKLAENRSSEF"
     misc_feature    <397..954
                     /gene="LOC139842073"
                     /note="electron transport complex protein RnfC;
                     Provisional; Region: PRK05035; cl47132"
                     /db_xref="CDD:481472"
ORIGIN      
        1 atggaagata ctgctggtat cgatatcgaa tttataacct ccaatgccgt taacaacgtc
       61 aacataagtc aaagcaatga tctgactgcc actgtttcat ctccttctac acttactgac
      121 aatcgatctt caggacttgt gaatgaaacg agttatgagc caatagggac tgttgagatt
      181 gttgcggata aactggcgat tgatgagact gatgaaaagc ctaacctgat taaaacaccc
      241 gagcctgatt ttgaaaatac tgctgctaaa gatctcgaaa taaaaacatc tgatgtcgca
      301 aatgacaagg tgttacctca aaatgataac ctgatcatca gcgtttcatc tccttctaca
      361 cttactgaca atcaatctgc aggacttgtg actgatgaaa agcttaaagc agtggatgaa
      421 gaaactgacg aaaagccaaa accggcagat gaagagactg atcctaaacc ggctgttgag
      481 attgatgctg ataaatcggc gattaaagat actgatgaaa tgcctaaacc cactgttgag
      541 attgatgcca agaaatcggc gattgaagag actgatgaaa agcctaaacc agcggatgaa
      601 gaaattgatg aaaagcttaa accggcagat gaagagactg atcctaaacc ggctgttgaa
      661 attgatgctg ataaatcggc aattgatgag gctgatgaaa agcctaaacc aacggatgaa
      721 gaaatcaatg aaaagcctaa accggcagat gaagagactg attctaaacc ggctgttgag
      781 attgatgtcg ttcaatcggc aatcgaagag actgatgaaa agcctaaacc agctgttgag
      841 attgatgccg ataaatctgc gattgaagag actgatgaaa agcctaaacc gactgttgag
      901 attgatgccg ttaaattggc gaccaaagag accgtcgaaa atcctaaacc ggctgtcgag
      961 attgatgtcg ttaaatcggc gatcaaagag actgatgaaa agcctaaact gattgaaact
     1021 cccgagcctg atatggaaga tactgctgct aaagatatca aaataaaaac atccaatgct
     1081 gctaatgaag aggtgttaac tcaaaatgtt gacacagttg ttgtttcatc tccttctaaa
     1141 cttgctgaaa atcgttcttc agagttttga
//
LOCUS       XM_071832251            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-1,4-xylosyltransferase
            IRX9 (LOC139842074), mRNA.
ACCESSION   XM_071832251
VERSION     XM_071832251.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139842074"
                     /note="beta-1,4-xylosyltransferase IRX9; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139842074"
     CDS             1..1089
                     /gene="LOC139842074"
                     /codon_start=1
                     /product="beta-1,4-xylosyltransferase IRX9"
                     /protein_id="XP_071688352.1"
                     /db_xref="GeneID:139842074"
                     /translation="MGSSERPKKKVQLWKKATVHFLLCFIMGFFTGFAPTNKPSFTTN
                     HVIAPNVNSPEISPPQNEISDQRLEHKNENFNRSMLDESLNIQIQENANVGQIEETDK
                     EAEIVATNENDENGKNVVNVDLSPKRLVIVVTPTNDKDELRGALLRKMANTLSLVRSP
                     LLWVVVESESESTEVSDILRKTNVMYRHLVFKENFTDVDVEMDHQRNVALKHIEYHRL
                     SGIVHFASLYNVYDLSFFDEIRNIEMFGTWPMAFLSANRQRVRIEGPVCDSSEVIGWH
                     LKSLNSSADDITRSPVHISTVGFNSSILWDPERWGRLTSAQHTSQNSIKFVKEEVLEE
                     ETKLKGLPQDGCSKILLWNLHIPRVVTG"
     misc_feature    1..1071
                     /gene="LOC139842074"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; Region: Glyco_tranf_GTA_type;
                     cl11394"
                     /db_xref="CDD:472172"
     misc_feature    order(403..405,409..411,493..495,676..678,682..684)
                     /gene="LOC139842074"
                     /note="active site"
                     /db_xref="CDD:132997"
ORIGIN      
        1 atgggatcat cagaaagacc aaagaagaaa gttcaattat ggaagaaagc cactgtccat
       61 tttttgttat gtttcattat gggattcttc actggatttg caccaacaaa taaaccttct
      121 tttactacaa accatgttat tgcaccaaac gttaattcgc ctgagatttc accaccacag
      181 aatgaaatct cggaccaacg tttggagcat aaaaatgaga atttcaatag gagcatgtta
      241 gatgaatctt taaatatcca aatacaagaa aatgctaatg ttggccaaat agaagaaacg
      301 gacaaagagg ccgaaattgt tgcaactaat gaaaatgatg aaaatggtaa aaatgttgta
      361 aatgttgatt tgagtcctaa aaggcttgta attgttgtta caccgacgaa cgataaagat
      421 gagctacgag gtgcgctttt gaggaaaatg gcgaacactt tatcattagt tcgttcacct
      481 ttattatggg tcgttgttga gtcagagtcc gagtctacag aagtatccga tattttgagg
      541 aaaactaatg tcatgtatag acatttggtt tttaaggaga attttactga tgtagacgtc
      601 gaaatggatc atcaaagaaa cgtagcgctt aagcatatcg agtatcatag gttaagtggg
      661 atcgttcatt ttgcatcgct ctacaacgtt tacgatctta gcttcttcga tgagattaga
      721 aatatcgaga tgtttgggac atggccaatg gcatttttat cagcaaatag gcaaagggtt
      781 agaattgagg ggccagtttg tgactcttca gaagttatag ggtggcattt aaaaagtttg
      841 aacagttcag cagatgatat taccagatca cctgttcata tatcaaccgt cggatttaac
      901 agctccattc tgtgggatcc cgaaagatgg ggtcgcctta catcagccca acacacctct
      961 cagaattcta taaagtttgt gaaagaagaa gtacttgaag aagaaaccaa attgaagggt
     1021 ctcccccaag atggttgctc caagattcta ttatggaatc ttcatattcc aagagtagtt
     1081 acaggttaa
//
LOCUS       XM_071832252             672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842075), mRNA.
ACCESSION   XM_071832252
VERSION     XM_071832252.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..672
                     /gene="LOC139842075"
                     /note="uncharacterized LOC139842075; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842075"
     CDS             1..672
                     /gene="LOC139842075"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688353.1"
                     /db_xref="GeneID:139842075"
                     /translation="MVATRTGRTSGELEELSNLIRSFSFDFNSQEKWIWSLASNGLFE
                     VKKLSSLIDEKVLGFGNHSLQATLRNNLMPKKLKIHVWRLLLKRIPVRIKLNKRGIDL
                     HSVRCPICDDDMESLDHSLFKCKVAIDVWFRVYKWWNFSNCATLKDTNIFRGKSPHTS
                     SPIGLKIWKAVEWVCAYFLWKNRNATVYQNKGWSSSVLLNEFQVKSFEWISCKLKDKS
                     GKSID"
     misc_feature    <208..390
                     /gene="LOC139842075"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtcgcta ctcgcaccgg ccgaacgtcg ggtgaacttg aagaattaag taatttgatt
       61 cggtcttttt ccttcgattt taattctcaa gaaaaatgga tatggtccct tgcgagtaac
      121 ggtctttttg aagtcaaaaa actatcctca cttatcgacg aaaaggtttt gggttttggt
      181 aatcattctt tacaagcaac tttgagaaac aatcttatgc caaaaaagtt aaaaattcat
      241 gtgtggagat tattgttgaa aagaatcccg gttcgaatta aacttaacaa aagaggcatc
      301 gatcttcata gtgttcgttg tcccatttgt gatgatgata tggaatcgct ggatcattcg
      361 ttattcaaat gcaaagtggc tattgatgtt tggtttcgtg tgtacaaatg gtggaacttc
      421 agtaattgcg caaccttaaa ggacacaaat atttttcgtg ggaaatctcc tcatacatca
      481 tctcctattg gtttgaaaat ttggaaagcc gttgagtggg tgtgtgcgta ctttctatgg
      541 aagaatcgga atgcgacggt atatcaaaac aaaggttgga gctcttcggt gttgctaaat
      601 gaatttcaag taaagtcgtt cgagtggatc tcgtgtaaac tcaaagacaa aagtggcaaa
      661 agtatcgatt ag
//
LOCUS       XM_071832253             971 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides vesicle-fusing ATPase-like
            (LOC139842076), mRNA.
ACCESSION   XM_071832253
VERSION     XM_071832253.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..971
                     /gene="LOC139842076"
                     /note="vesicle-fusing ATPase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842076"
     CDS             1..771
                     /gene="LOC139842076"
                     /codon_start=1
                     /product="vesicle-fusing ATPase-like"
                     /protein_id="XP_071688354.1"
                     /db_xref="GeneID:139842076"
                     /translation="MFVENDVKACYFDIVTQIVVEDQEITDVERGMLSQDSYFVFEAS
                     NSSGIKIINQREAAGSNIFKHKELNLQSLSMSGPSNEFSDIFRRVFASRVIFPHIAKK
                     LGVKHVKGILLYCPPGTDKTPVARQIGEMLRGKDLKVVNGPELLSSSVGETEKNVRDL
                     FADAEQDQRTLGDQSELHVIIIDEIDAICKARGSTWDGTGLHDSVVNQLLTKIDGVEP
                     LNNVLVIGITNKKDLLDEALLRPGRLEVQMEIRSELVF"
     misc_feature    229..750
                     /gene="LOC139842076"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    order(358..366,415..417,421..426,547..552)
                     /gene="LOC139842076"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:410865"
ORIGIN      
        1 atgttcgttg aaaatgacgt gaaggcttgc tacttcgata tagtcaccca aattgttgtg
       61 gaagatcagg aaataacaga tgttgaaaga ggcatgctct ctcaagattc atactttgtg
      121 tttgaagcct ctaattcaag tggaattaag attattaacc agcgcgaggc tgctggcagc
      181 aacattttca agcacaagga gttgaacctt caatcactca gcatgagtgg cccgagcaat
      241 gaattttcag atatttttag aagagttttt gcctctaggg ttatctttcc acacatagca
      301 aaaaagctgg gtgtaaagca tgtcaaggga atactgttat attgtccccc tggtactgac
      361 aagacgccag tggctcgtca gatcggagag atgttaaggg gaaaggatct aaaggttgta
      421 aatgggcctg aattgctgag tagctctgtt ggtgaaactg agaagaatgt gagagacttg
      481 tttgctgatg ccgaacaaga tcaaagaaca ctaggggatc aaagtgagtt gcatgtgatc
      541 attattgacg aaattgatgc aatttgtaag gctagaggtt cgacatggga tggcacagga
      601 ttgcacgata gcgttgttaa tcagcttctt acaaagattg atggagtcga acctctaaat
      661 aatgtgctgg taatcggtat aacaaacaag aaagatttgc ttgatgaagc tcttttgagg
      721 cctggacgtt tggaagtcca aatggagatc aggtctgaac ttgtgttcta gttacttttg
      781 agggttgaga acgtggtaat caagttactt tttagttgtt ttgatctttc acttttggca
      841 tttacattct gttatcgtgc aattgtcaaa tcatctttgt tcgtggttgt tacgtatcct
      901 attaaacgaa ttatctttga tcatgattgt tatgtatcct ttttaccggt atatgacata
      961 tgctatgaac t
//
LOCUS       XM_071832254             414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            TGA2.1-like (LOC139842077), mRNA.
ACCESSION   XM_071832254
VERSION     XM_071832254.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..414
                     /gene="LOC139842077"
                     /note="transcription factor TGA2.1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139842077"
     CDS             1..414
                     /gene="LOC139842077"
                     /codon_start=1
                     /product="transcription factor TGA2.1-like"
                     /protein_id="XP_071688355.1"
                     /db_xref="GeneID:139842077"
                     /translation="MWIGGLRPTDMPQLIDNRTEVFGPQLEKMKSLTSEITNKEIALS
                     TKFRNLEVTISNTLTGKYFVIKGNEVSMSSYYNSMSFLVGKLTIMHNFMDEKIFSGMH
                     IVLTTRQIVMTLFTIHDRLTENNYIVEYVKNATKI"
ORIGIN      
        1 atgtggattg gtggattacg tccaactgat atgccacagt taatcgacaa tcgtactgaa
       61 gtttttggac ctcaacttga aaaaatgaaa tctttaacat ctgaaattac gaacaaagag
      121 attgcactta gtacaaaatt tagaaattta gaagtcacaa tatcaaatac tttaacaggg
      181 aaatattttg tgattaaagg aaacgaagtg tcaatgtcaa gttattacaa ttctatgtca
      241 tttttagttg gaaaacttac tattatgcac aactttatgg atgagaagat tttctcaggg
      301 atgcacatag tactaacaac aagacaaata gttatgacat tattcacaat tcatgatcgt
      361 ctaacagaga ataactacat tgtcgaatat gtgaaaaatg caacgaagat ctga
//
LOCUS       XM_071832255             549 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842079), mRNA.
ACCESSION   XM_071832255
VERSION     XM_071832255.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..549
                     /gene="LOC139842079"
                     /note="uncharacterized LOC139842079; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842079"
     CDS             1..549
                     /gene="LOC139842079"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688356.1"
                     /db_xref="GeneID:139842079"
                     /translation="MPLAEVIKGMPNYGKFLKDLTSSKGKYQEVSATFLNEACSAILQ
                     KPKMPPKLGDPDSFIIPHLLGDSIVYDALADLGESVNLMPYSLYLKLGLGDLKPTRMG
                     IRLPNHSFDTPIAMSNNVFFDEDVPTPCDYWIPILLNHPMRNVFTEFEHASERQLLLM
                     RDTMTYHPSVDDTPDSFSFLVT"
ORIGIN      
        1 atgccattgg cggaagtgat aaaaggaatg cccaactacg ggaagttttt aaaggacttg
       61 acctcttcga aaggtaagta ccaagaggtg tcggccacat tcctcaatga ggcgtgttca
      121 gccattttgc aaaagccaaa gatgcctcca aaattaggag acccggatag ctttattatt
      181 ccccatttat tgggtgattc gatagtgtac gatgcactag ccgacttggg ggaaagcgtt
      241 aatttaatgc cttactcatt gtatttaaaa cttggcctag gagacttaaa accgactaga
      301 atgggaatcc gtttgcctaa ccattctttt gacactccta tagcaatgtc gaacaatgtc
      361 tttttcgatg aagatgtccc caccccatgt gactactgga tccccatatt gctaaaccac
      421 ccaatgcgca acgtattcac tgagttcgag catgcttctg agcggcagct tctcttgatg
      481 cgagacacta tgacttacca tccatctgtt gatgacaccc ctgactcctt ttcctttcta
      541 gtcacttaa
//
LOCUS       XM_071832256             546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842080), mRNA.
ACCESSION   XM_071832256
VERSION     XM_071832256.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139842080"
                     /note="uncharacterized LOC139842080; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842080"
     CDS             1..546
                     /gene="LOC139842080"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688357.1"
                     /db_xref="GeneID:139842080"
                     /translation="MELIDGVWLALSFDNVETLRNRLVPKKIEVFIWRARRGRIPVRI
                     ELDKCGIDLHSIRCPICDEDLESVEHILFSCSFAKDIWGKVLNWWGYSSANFIFGDIF
                     EGTFGSFASDDKKTIWQDLCWCVCYSLWKSQNSKVFNNKVVTAPVLFSEIQVASFEWI
                     SRRIKKHNLDWHRWFNFPLSS"
     misc_feature    19..243
                     /gene="LOC139842080"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggagttaa tagatggcgt ttggcttgct ttaagttttg ataatgtgga aactcttaga
       61 aatcgtctcg ttccaaaaaa gattgaggtg ttcatttggc gggctagaag aggtaggatt
      121 ccagtaagga ttgaattgga taaatgtggt atcgatcttc atagtattcg atgccctata
      181 tgtgatgagg acttggaatc ggttgagcat atcttgttct cttgtagttt cgcaaaggat
      241 atttggggta aagtccttaa ttggtggggt tactcgtcgg ctaactttat ttttggtgac
      301 atctttgagg gtaccttcgg ctcatttgct tcggatgata agaaaacaat ttggcaagat
      361 ctttgttggt gtgtttgtta ttcgctatgg aaatctcaaa actcaaaagt gtttaacaac
      421 aaggtggtta cggctccggt gctctttagc gaaattcaag tggcttcctt tgagtggatc
      481 tcgcgaagaa ttaaaaaaca caatttagat tggcatagat ggtttaattt tcctttatcg
      541 agttag
//
LOCUS       XM_071832257             750 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842081), mRNA.
ACCESSION   XM_071832257
VERSION     XM_071832257.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..750
                     /gene="LOC139842081"
                     /note="uncharacterized LOC139842081; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842081"
     CDS             1..750
                     /gene="LOC139842081"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688358.1"
                     /db_xref="GeneID:139842081"
                     /translation="MPLAEVIKGMPNYGKFLKDLTSSKGKYQEVSATFLNEACSTILQ
                     KPKMPSKLGDPGSFIIPRLLGDSVVYDALADLGASVNLIPYSLYLKLGLGDLKPTRMG
                     IRLPNHSFDTPIGIAEYLIVRVSHPCPNKGPLVFPADFVVIEMKEDTKVPIILGRSFL
                     NTADAIIHVQQNQLSIGVSDEKVIFHVDKAMKQPKSTDVTCFKLDMINLCIENDVQEF
                     LEDAATGVVSVDSSNDHDVDAEIEKTVHFEK"
     misc_feature    196..483
                     /gene="LOC139842081"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(223..225,229..231,235..237,307..315,460..462)
                     /gene="LOC139842081"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    223..231
                     /gene="LOC139842081"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    223..225
                     /gene="LOC139842081"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(307..318,328..339)
                     /gene="LOC139842081"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgccattgg cggaagtgat aaaaggaatg cccaactacg ggaagttttt aaaggacctg
       61 acctcttcga aaggtaagta ccaagaggtg tcggccacat tcctcaatga ggcgtgttca
      121 accattttgc aaaagccaaa gatgccttca aaattaggag acccgggtag ctttattatt
      181 ccccgtttat tgggtgattc ggtagtgtac gatgcactag ccgacttggg ggcaagcgtt
      241 aatttaattc cttactcact gtatttaaaa cttggcctag gagacttaaa accgactaga
      301 atgggaatcc gtttgcctaa ccattctttt gacactccta taggtatagc cgaatactta
      361 atagtaagag ttagccaccc ttgtccaaac aagggaccat tagtctttcc agccgatttt
      421 gtagtgattg aaatgaaaga ggacactaaa gtaccaatca ttctaggtcg atcttttcta
      481 aacaccgctg atgctattat ccatgttcaa cagaaccaac ttagcatagg tgtaagtgac
      541 gaaaaagtga ttttccatgt agataaggct atgaaacaac ccaagtctac tgatgttact
      601 tgttttaaac ttgatatgat aaacttgtgt attgagaatg atgtgcagga atttttagaa
      661 gatgctgcta caggtgttgt ttctgttgat agtagcaatg atcatgatgt agatgctgaa
      721 attgagaaaa cggttcactt tgagaaatag
//
LOCUS       XM_071832259             543 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842082), mRNA.
ACCESSION   XM_071832259
VERSION     XM_071832259.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..543
                     /gene="LOC139842082"
                     /note="uncharacterized LOC139842082; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842082"
     CDS             1..543
                     /gene="LOC139842082"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688360.1"
                     /db_xref="GeneID:139842082"
                     /translation="MVLGPYSKQHGTLRNNLVPKKVQIFIWRVMLKRLAFKVELDKRG
                     VDLHSVRCPICDDDLESVEHITLSCDRVKYVWVRIFKWWGANGFVCSNITELVSSKGP
                     STMTSAGESIWQALKWISLYLIWKNRNTLVFQGKSWNAPMILNEIQTKSFEWISLRSK
                     GKKFDWLSWLSNPSVYFNFL"
     misc_feature    <43..225
                     /gene="LOC139842082"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggttcttg gtccgtattc gaaacaacat ggtacgttaa ggaacaacct tgtccctaaa
       61 aaggttcaaa ttttcatttg gagggtaatg ttaaaaaggt tagcgtttaa agtggaatta
      121 gacaagagag gagttgattt acatagcgtg aggtgtccca tttgcgatga cgatctagag
      181 tcggtggaac atattacact ttcgtgtgat cgagttaaat atgtgtgggt tagaatattc
      241 aaatggtggg gtgctaatgg tttcgtgtgt tcaaacatta cggaattggt tagctccaaa
      301 ggcccttcga caatgactag tgcgggggaa tcaatttggc aagctcttaa gtggataagt
      361 ttatatctta tatggaagaa ccggaacacg ttggtatttc aaggtaaaag ttggaacgct
      421 ccgatgattc ttaacgagat acaaactaag tctttcgaat ggatttcatt gagatcaaaa
      481 gggaaaaagt ttgattggct ttcgtggctt tcgaatccta gtgtttattt caattttttg
      541 taa
//
LOCUS       XM_071832260             912 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842083), mRNA.
ACCESSION   XM_071832260
VERSION     XM_071832260.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..912
                     /gene="LOC139842083"
                     /note="uncharacterized LOC139842083; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842083"
     CDS             1..912
                     /gene="LOC139842083"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688361.1"
                     /db_xref="GeneID:139842083"
                     /translation="MVLSIRNTTTNRALEAIDALDELSDNEEVEQIPRAPRRYLHRDR
                     QGRALALWNDYFSDNPTFPDDYFRNRYRMSKPLFLRIFQGILNFSQTPVPKYFSYFIQ
                     KRDATGLLGFNIVQKVTSVIRQLAYAASADVFDEYLHMGEQTSYDCLNNFCKCIFHLY
                     GPEYLRRPTAQDVQRLTTKHAQIHGFPGMLGSIDCMDWRWRNCPARWKGHYIRGDHGY
                     QSIMLEAVASYDGWFWHAFFRTAGSNNDINVLNQSDLFSELLAGEAPPCTYTVNGYER
                     IMSSVEVDVFVASAPPFRLWPTGKPFL"
     misc_feature    487..>837
                     /gene="LOC139842083"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggtattat cgatcagaaa tacgactacg aatcgagcac tcgaagccat tgacgcgcta
       61 gatgaattaa gtgataacga agaagtagaa caaataccac gggcacctag aagatattta
      121 catagagatc gtcagggtcg tgcattggct ttatggaatg attatttctc cgacaatccc
      181 acatttccag acgattattt tcgtaatcgt tatcgaatga gcaaacctct atttcttcgt
      241 atttttcaag gtatattgaa cttttctcaa actccggttc ctaaatattt tagttatttt
      301 attcaaaaac gtgatgctac cggattactt ggttttaata ttgttcaaaa agtaacatcc
      361 gtcatacgtc aactagctta tgccgcttcg gccgatgttt ttgatgagta tttgcatatg
      421 ggtgaacaaa cctcatatga ttgtttgaac aatttttgca aatgtatttt ccacttgtac
      481 ggtccggaat atttgagacg accaactgca caagatgtgc aacgtttgac cactaaacat
      541 gctcaaatac atggttttcc ggggatgtta ggaagtattg attgtatgga ttggagatgg
      601 agaaattgtc cggcacgttg gaagggtcat tatatacgag gtgaccatgg ttaccagtca
      661 attatgcttg aagcggtagc atcgtacgat ggatggtttt ggcacgcgtt ttttagaact
      721 gccggatcaa acaatgatat caacgtgcta aatcaatccg acttgtttag tgagttatta
      781 gccggtgaag caccaccatg tacgtatacg gttaacggat atgagaggat tatgagctca
      841 gttgaggtcg acgtgtttgt tgcgtctgct cctccttttc gtttgtggcc gacaggaaaa
      901 ccctttttgt ga
//
LOCUS       XM_071832261            1524 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842084), mRNA.
ACCESSION   XM_071832261
VERSION     XM_071832261.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1524
                     /gene="LOC139842084"
                     /note="uncharacterized LOC139842084; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842084"
     CDS             114..1496
                     /gene="LOC139842084"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688362.1"
                     /db_xref="GeneID:139842084"
                     /translation="MGHRHVFSPSIMFETENDQRWNLTDHPCDQTAHSDAAESSSHTY
                     PANNMSINGEDYASNCNSSPVSNAYSSISNNNQTQHDQQDTSGPSDLPTRPETNGNHA
                     PSSSYNGQPVNEDDSFDIRTSNERWRRKRKSLDTSTDGTNGYINHHVGGSSSNISMHT
                     SPWEETRNMDFFRTRWDYRNNVKPVYGDENSHRNVKSRTTPNGPPVDDSSNGSMSQWN
                     PTNTPFVHCHELNPFSVESGSFSENVPQDFMCTEMQNVGGTWRNYIQRSDPSLRASSS
                     SLQLGTADEGLQLTNEHYLSPHPRSTIVWHSSDRNARSRMSFDRYTSFSEDANAHDQQ
                     SPEGLMIMEQSAFGSRNLFDHHREMRLDIDDMSYEELLALGERIGTVNTGLSEDMISK
                     CLRESIYCSSDQIQEERTCVICLEEYANMDDVGMFKGCKHDFHVGCIKKWLSIKNLCP
                     ICKSEPMKHK"
     misc_feature    <1158..1478
                     /gene="LOC139842084"
                     /note="RING-finger-containing ubiquitin ligase
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: COG5540"
                     /db_xref="CDD:227827"
     misc_feature    1338..1475
                     /gene="LOC139842084"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF24, RNF122, and similar proteins; Region:
                     RING-H2_RNF24-like; cd16469"
                     /db_xref="CDD:438132"
ORIGIN      
        1 ttctttctat ctgtccaatt ctcacacgcc catttcatca ttccaccgaa tatacccccc
       61 ctttgcataa attagttggg aataaattat cctgattttt tgttccccat aacatggggc
      121 atcgacatgt tttcagcccg tcgattatgt ttgagactga aaatgatcag agatggaact
      181 tgacggatca tccctgtgat caaacggcac acagtgatgc tgctgaaagc agttctcata
      241 catatccagc taataacatg tcgataaacg gagaagatta tgcttctaat tgtaactctt
      301 ctcctgtatc aaatgcatat tcttcaatat ctaataacaa ccaaacacag catgatcaac
      361 aagacacttc tggcccatca gatcttccta cacggcccga aactaacggg aatcatgcac
      421 cttcatccag ctacaacggt caaccagtta acgaggacga ttcgtttgac attaggacta
      481 gtaatgaaag atggcgtcgt aaacgtaaaa gcctggatac ttcaaccgat ggtacgaacg
      541 gatatatcaa ccatcatgtt ggtggtagtt cgtctaatat ctctatgcac actagcccgt
      601 gggaagaaac tcgtaatatg gacttttttc gtacccggtg ggattatcgt aataacgtga
      661 agcccgttta cggtgatgaa aattctcata ggaatgttaa aagcaggact acacctaacg
      721 gtccacccgt ggatgattct tcgaacgggt caatgagtca gtggaatcca actaatacac
      781 cttttgttca ttgtcacgag ttaaatccgt tctctgttga aagcggtagt tttagcgaaa
      841 atgtccctca agattttatg tgtaccgaaa tgcaaaatgt tggaggaact tggaggaact
      901 atattcagag atctgaccca agtttgaggg cttcgtctag cagcctacaa ttggggactg
      961 cagatgaagg tttgcagtta accaacgagc attatttgtc cccgcatccg agatctacga
     1021 tcgtctggca ttcgagcgat cgaaatgcac gatcaaggat gtcgtttgat agatatacat
     1081 cattttctga ggacgcaaat gctcatgatc aacaatctcc tgagggtctc atgattatgg
     1141 aacaatccgc cttcggatca agaaatctgt ttgatcatca tcgggaaatg aggcttgaca
     1201 tagatgacat gagctatgag gagcttcttg cactcgggga acggattgga accgtgaaca
     1261 ccggcttgtc ggaggatatg atctcgaagt gtttaagaga atcgatatat tgttcctctg
     1321 atcaaataca agaggaacga acatgtgtga tctgcttgga agagtatgca aacatggatg
     1381 atgttgggat gtttaaaggt tgcaaacatg attttcatgt aggatgcatc aaaaagtggc
     1441 tgtcaatcaa gaacctgtgt cccatttgta aatcagaacc catgaaacac aagtgaactt
     1501 tgttggcatt tgcattgtat atat
//
LOCUS       XM_071832262             405 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842085), mRNA.
ACCESSION   XM_071832262
VERSION     XM_071832262.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..405
                     /gene="LOC139842085"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139842085"
     CDS             1..405
                     /gene="LOC139842085"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688363.1"
                     /db_xref="GeneID:139842085"
                     /translation="MHDPREQHLHALKQILRYIQGTTDLGLQLYASSPTTLVAYSDAY
                     WAGCPTTRRSTSGYCVFLGSNLLSWSSKRQLTPSRSSGKAEYRGVANAVAETCWIRNL
                     LRELHCPLTSATLVYCDNVISVYLSTNPVQHQ"
     misc_feature    112..>399
                     /gene="LOC139842085"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(124..135,238..246,253..255,355..357)
                     /gene="LOC139842085"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcatgatc ctcgagagca acatttacac gctctcaaac agatacttcg ttatattcag
       61 ggaactaccg atcttggcct gcaactctat gcgtcatctc ctaccacttt agttgcatat
      121 tctgatgcat attgggctgg ttgcccgacc accagacgct ccacgtctgg ttattgtgtt
      181 tttctcggca gcaatcttct ttcctggtct tccaagcggc agctcacgcc atcccgatcc
      241 agtggcaaag cggaatatcg cggagttgct aatgctgttg ccgaaacatg ttggattcgt
      301 aatctactac gtgagcttca ctgcccgctc acctcggcta ctttggttta ctgtgataat
      361 gtcatctccg tctatctctc cactaatccg gttcaacacc agtga
//
LOCUS       XM_071832263             929 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842087), mRNA.
ACCESSION   XM_071832263
VERSION     XM_071832263.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..929
                     /gene="LOC139842087"
                     /note="uncharacterized LOC139842087; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842087"
     CDS             408..929
                     /gene="LOC139842087"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688364.1"
                     /db_xref="GeneID:139842087"
                     /translation="MDESPAPDLGSMRKFLEVRTISFCTKMGHKEGWVMVKRSFCTKI
                     IVEFAKGVPRGSGGYVGGSREYLGRGPPPGAGRCFNFGLDGQWSRDCKAGDWKNKSYR
                     CGERGHIERHCQNNPKKFVESKRGRSYSRTPSPPRRGRSRSRSYSRCCSYRQFGTPQD
                     LSLGFASFRVSVP"
     misc_feature    <594..761
                     /gene="LOC139842087"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 acaaacctag cttctcaata tctccaatta ccacctctcc accgtcgcct ccttcaccag
       61 tcaccactca ccacctccgt caccgcctcc gtcaacgtca gcgtatttgg tgcaagcggc
      121 ctcgaattct ccgcctgtaa cctacttcaa aagcactgcc atcgtctatc agatccataa
      181 cataaaaaga agtttgcagt ggaataccga acggaagtct cactccatgt tacaggagtc
      241 gtttgccaaa gttgcattct ttgacgatga tattgtggag tcagaaaaga attatgtctc
      301 tttaaactca ttcttggtgt aagtatacca gaaaagagtt gtcatacatt atggttattc
      361 gtaaagtaat caaggagcat ttgaagtgaa agaatatcat tgagattatg gatgaatctc
      421 cggcaccaga ccttggttcc atgagaaaat ttctcgaggt cagaacgata tctttctgta
      481 cgaaaatggg ccataaagaa ggttgggtaa tggtcaaaag atctttctgt acaaaaatca
      541 tagttgaatt tgccaaaggg gtgccacgtg gcagtggtgg ttatgtgggc gggtcacgtg
      601 aatatcttgg cagaggtcct cctcctggtg cgggtcgctg ctttaatttt ggactagatg
      661 gtcaatggtc tcgagattgt aaagctggtg actggaagaa caaatcttat cgttgtggtg
      721 agcgaggcca tatagagaga cattgtcaga acaacccgaa gaagtttgtt gagagcaagc
      781 gtgggcgaag ttactcgagg actccttctc cacctcgacg aggtagaagc cgcagtcgta
      841 gttatagcag gtgctgcagc tacaggcaat ttggaactcc tcaagatcta tctttaggat
      901 tcgcgtcatt tagggtgtct gttccctaa
//
LOCUS       XM_071832264            1008 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842088), mRNA.
ACCESSION   XM_071832264
VERSION     XM_071832264.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1008
                     /gene="LOC139842088"
                     /note="uncharacterized LOC139842088; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842088"
     CDS             1..1008
                     /gene="LOC139842088"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688365.1"
                     /db_xref="GeneID:139842088"
                     /translation="MGDFNVTRSLNEHSSSCSQLTEDMQEFNECINKIEVDDINSSGF
                     QFTWTKSLKKSKLWDSEKLDRIMINAEVMNSLPQTHGVFLPFITSDHSPAILIIQDSI
                     VCKSKSFRFMNYITEKSEFLQVVENVTLNNSEAVDMIKEVTNEEIKEALLDTDSEKAA
                     GLDGPKLILADNIKKNPEFKYHVGCKSMKLTHICFVDDLMVLCHGDINSLKVIKQALK
                     GVSQVFGLLPNMNKSILFFESVNIGLQQEITQLLPFKIGKLPVKYLGVPLLAKTLGIA
                     DCKEIVDKIRMRIDNWKNKHLSYAGRLQLIASILSSIYICWASVYIFLQNTVKEIEKN
                     T"
     misc_feature    <547..804
                     /gene="LOC139842088"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgggggatt ttaatgttac tagaagcctg aatgaacact catctagttg ctctcaactt
       61 acagaagaca tgcaggaatt taatgagtgt attaataaga ttgaggtgga tgatataaac
      121 agctctggtt ttcagtttac atggaccaaa tctctaaaaa aatccaaatt gtgggactct
      181 gaaaagcttg acagaattat gattaatgct gaagtcatga acagtcttcc tcaaacccat
      241 ggtgtattct taccttttat tacatctgat catagtcctg ctattctaat cattcaagat
      301 agtattgttt gtaagtctaa atcatttagg tttatgaatt atattactga aaagagtgaa
      361 tttttgcaag tagttgagaa tgtgactcta aataatagtg aagctgttga tatgattaaa
      421 gaagtaacaa atgaggaaat taaagaagct ttattggata ctgatagtga aaaagcagct
      481 ggcctagatg gtcctaaatt aattttggca gataatatca agaagaaccc tgagttcaag
      541 tatcatgtgg gatgtaagag tatgaaactt acacatatat gttttgttga tgacttaatg
      601 gttctatgtc atggagacat taattcactc aaagtcatca agcaggcttt gaaaggggtt
      661 agtcaagttt ttggtctttt gcctaatatg aacaaaagca ttttgttctt tgaaagtgta
      721 aacattggcc tgcaacaaga aatcactcaa ttacttcctt ttaaaatagg caagttgcct
      781 gtcaaatacc ttggtgtgcc tctattagct aaaacattgg gaattgcaga ttgtaaagaa
      841 atcgttgata aaatcaggat gagaattgat aactggaaga ataaacactt atcttatgca
      901 ggaagattgc aactcattgc ctctatttta tcctctattt acatatgttg ggcatctgta
      961 tatatattcc ttcaaaatac tgtgaaggag attgaaaaaa atacttaa
//
LOCUS       XM_071832265            1068 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At1g57790-like (LOC139842089), mRNA.
ACCESSION   XM_071832265
VERSION     XM_071832265.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1068
                     /gene="LOC139842089"
                     /note="F-box/kelch-repeat protein At1g57790-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139842089"
     CDS             1..1068
                     /gene="LOC139842089"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At1g57790-like"
                     /protein_id="XP_071688366.1"
                     /db_xref="GeneID:139842089"
                     /translation="MLVNDECVFSFPFHILELIMKFCGDVDYLNFRATCKHLAAVPVI
                     RWSNITEIQRTYSLVSPWSMVIDTDRDIMTITDLMSGNKYFIRTSQELVGFLQVHCSR
                     YGWLLTSKNTSELMFFNPFTSDIRKLPRRNYPLIIDKCCFSAAPTSPDCMVVVITTLG
                     DMQVYIHHVSREQSWRRLAFTDFYSVSLCFPTFYGQDMYALMRGRLYVFRHTKEDDYE
                     WQSVEWDLPYIKPSMKYYLTKSDQHVLLVSVDVFEKSVEVHKLNQSTSKLEKLKSLGK
                     YAIYVSATTCLCIEATTPKMENKVYFHQSYSENNTILFYSLETRRFHTFDDDNLKGSF
                     GDFFKDKRLLLPHGWIEPSVA"
ORIGIN      
        1 atgctagtca atgatgagtg cgtatttagt tttccgtttc atatattgga gttgattatg
       61 aagttttgtg gtgatgtcga ctacctcaac tttcgtgcaa cgtgcaaaca cttagcagca
      121 gtacctgtca ttcgatggag caacataaca gaaatacaga ggacatattc cttagtatca
      181 ccatggtcga tggtcataga cacagatcgg gacattatga ctatcactga tctgatgtca
      241 ggtaacaagt atttcataag aacatcacaa gaactcgttg gttttctcca agtacattgt
      301 tctcggtatg gctggttgtt gacgtctaaa aatacatcag agttaatgtt ctttaacccc
      361 ttcacaagtg atatacgcaa gcttccgcgt cgaaactatc ctcttattat agacaaatgt
      421 tgtttctctg cagcgccaac ttcccctgat tgtatggtgg ttgtaatcac aactttaggt
      481 gacatgcaag tttacatcca ccatgttagt cgagaacaat cgtggcgtag actggctttt
      541 accgattttt attcagtatc gctctgtttt ccaacattct atggccaaga tatgtatgct
      601 ttgatgcgcg gacggcttta tgttttcaga cacacaaaag aagatgatta tgaatggcag
      661 tctgttgagt gggaccttcc atatattaaa ccttctatga aatattacct aacaaaatct
      721 gatcaacatg ttttactagt ttccgtagac gtgtttgaaa aatccgttga agtgcacaag
      781 ttgaatcaat ctacatcaaa acttgagaaa ctaaagagct tgggaaaata tgcgatttat
      841 gtcagtgcaa caacatgttt atgcattgaa gctacaacac caaaaatgga gaacaaagta
      901 tactttcatc agtcatattc cgaaaacaac acaattcttt tctattctct tgaaacgcgc
      961 aggtttcaca catttgatga tgacaacttg aaaggaagtt ttggggattt tttcaaggat
     1021 aaacgacttc tactccctca tgggtggatt gaaccaagtg ttgcctag
//
LOCUS       XM_071832266             705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842090), mRNA.
ACCESSION   XM_071832266
VERSION     XM_071832266.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..705
                     /gene="LOC139842090"
                     /note="uncharacterized LOC139842090; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842090"
     CDS             1..705
                     /gene="LOC139842090"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688367.1"
                     /db_xref="GeneID:139842090"
                     /translation="MGLAEERDLYEESQLQTLLALLGPISLNNDKGDEIQWVHSVNKV
                     YSVPEGTRIMLVSNLNVEFDWVNVVWSKSIPSKIAIFHWLAIQGGIPVKEVFHFRHCL
                     RDGSDDKCGWCSDIELIDHLLLHCPWSYSIWTAMFKWWNIYWVMPSSVSEFSLDCYKG
                     LGINASKFWSLIGPATYWAIWFARNEVLFNGIYTCWNVLLVRIKYKVFEWLVEAKVSE
                     RFQFHVWDSQPWMLMF"
     misc_feature    178..396
                     /gene="LOC139842090"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggggttgg ctgaggagag ggatttgtat gaagaatcac aattacaaac gcttttggca
       61 ttgttgggtc ctatatcgct taataatgat aagggtgatg agattcaatg ggttcactcc
      121 gttaataagg tctattcggt cccggagggc acccggatta tgcttgtttc taatttgaat
      181 gtagagttcg attgggttaa tgttgtatgg agcaaaagta tcccgtccaa aatcgctatc
      241 tttcattggt tagcaatcca aggaggaata ccggtaaaag aagtgttcca ttttcggcat
      301 tgtttaagag atggttcgga tgacaagtgc gggtggtgtt cggatatcga gttgatagac
      361 catcttcttt tacattgtcc atggtcttat agcatttgga cggctatgtt caagtggtgg
      421 aatatttatt gggtcatgcc ttcgtccgtc tcggagttct ctttagattg ttataagggt
      481 ttgggtataa atgcatcaaa gttttggagc ttaatcgggc cggctacgta ttgggcgatt
      541 tggtttgcta gaaacgaggt attgtttaac gggatttaca catgttggaa tgtattattg
      601 gttcgtataa aatacaaagt gtttgagtgg ctagtggaag caaaagttag cgaaagattc
      661 caatttcatg tgtgggattc acagccatgg atgttgatgt tttaa
//
LOCUS       XM_071832267            1605 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842091), mRNA.
ACCESSION   XM_071832267
VERSION     XM_071832267.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1605
                     /gene="LOC139842091"
                     /note="uncharacterized LOC139842091; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842091"
     CDS             1..1605
                     /gene="LOC139842091"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688368.1"
                     /db_xref="GeneID:139842091"
                     /translation="MEKNHKRSTSTLNKDCCLTKLRNWKASSRLLKVKSVARRDPSTK
                     GPIKSTCSSCANKSKDNGKAPMDNTKNPRHPNHNRQVPTSSNSSFSVSDDGIREFGHQ
                     LGLKGFGVGKDSKLGWFKNVCRVEKPNIVVLQETKIHNVDLRWIQNLWGSLNCNFVQK
                     EMIGKSGGQLIIWDTMCFDVTDSFVSDFCIGIRGTWRNTWKECHVINVYGPHDDRKKI
                     ECWNFLSNKISSDPNQAWVICGDFNEVRSEEERFNCQFIDSRAKKFNEFIESSNLVDI
                     PLGGRLFTRKFPGHHRTKLALKEKSLLKFGNLDGEIDMLKSMANSLELKAEKGLINDD
                     ERNQWLNIRKEFFQKEKVKANMLKQKARVRWILEGDENSKYFHAVVKRGYNKNNIRGL
                     SINGTWCEDPLDIKEAAFNHFKCLFEEHVFSRPSLVNLAYPTITSDEANRLEAPICEL
                     EILNEINECGSSKAPEPDGFNLRFFKRIWDIIKEYVVNGVSWFWEHGDFSKGCNASFV
                     TLILKKNDPITLGDYRPLVLSGATIK"
     misc_feature    358..873
                     /gene="LOC139842091"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atggagaaaa atcataagcg atctacttct acgctcaata aggattgttg cttgaccaaa
       61 ttacgaaatt ggaaggcatc ttcaaggtta ctgaaagtta aatcggttgc aaggagagat
      121 ccttcgacaa aggggcctat caaatcaact tgctcttcat gtgctaataa gtcaaaggac
      181 aacggtaaag ctcctatgga caacaccaaa aatccgagac atccgaatca taacaggcaa
      241 gttccaactt ccagtaactc atcgttttct gtttcggatg atggtattag agagtttggg
      301 caccaattag gtctaaaagg tttcggggtt gggaaggata gtaagttagg ttggtttaaa
      361 aatgtttgtc gtgttgaaaa acccaatatc gttgtcttgc aagaaactaa gatacataat
      421 gtcgatttaa ggtggattca aaacctttgg ggttctctta attgcaattt tgttcaaaaa
      481 gaaatgatag ggaaatcggg aggtcaattg ataatatggg atacaatgtg ttttgatgtt
      541 actgactctt ttgtctctga tttttgtatc ggtattcgag gaacttggag aaacacatgg
      601 aaagaatgtc acgtgatcaa tgtatatggc ccgcatgacg accgtaagaa aattgagtgc
      661 tggaactttt tatccaacaa gatttcaagc gatccaaacc aagcatgggt tatttgtgga
      721 gattttaatg aggttcgttc ggaagaggaa agattcaact gtcaattcat tgatagtagg
      781 gcgaagaaat ttaatgagtt cattgaatca tcaaatttag ttgatattcc ccttggtggc
      841 agattattca ctcggaaatt tccgggtcat cacagaacca aactcgcgct aaaggaaaaa
      901 agtttgttaa aattcggtaa tcttgacggg gagatcgaca tgttgaaatc catggccaac
      961 tcacttgaac ttaaggcgga aaagggtctc ataaatgatg atgaacgaaa tcaatggttg
     1021 aacatcagga aggaattttt tcaaaaagaa aaggtaaaag ccaatatgtt aaaacaaaaa
     1081 gcgagggttc gttggatttt agaaggtgat gagaattcta agtacttcca tgcggtggtc
     1141 aaaagagggt ataataaaaa taacattcga ggattatcca ttaacggtac ttggtgcgaa
     1201 gatccactag acatcaaaga ggcggccttt aatcacttta agtgtctttt cgaagaacat
     1261 gtgttttcta gacctagtct agtaaacctt gcttatccga ctattacaag tgatgaagct
     1321 aatagattag aagccccgat ttgtgaacta gagatcctta atgaaataaa tgagtgcggt
     1381 agttctaaag cccccgagcc ggatggtttc aacctaagat tcttcaaaag aatttgggac
     1441 attattaagg agtatgttgt taatggcgtt tcttggtttt gggaacatgg tgatttttct
     1501 aagggatgta atgcttcttt cgttacactc atcctaaaga agaatgatcc gatcactctc
     1561 ggggattacc gcccattagt cttatcagga gctactataa aatag
//
LOCUS       XM_071832268            1701 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BTB/POZ domain-containing
            protein At5g03250-like (LOC139842092), mRNA.
ACCESSION   XM_071832268
VERSION     XM_071832268.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1701
                     /gene="LOC139842092"
                     /note="BTB/POZ domain-containing protein At5g03250-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139842092"
     CDS             1..1701
                     /gene="LOC139842092"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein
                     At5g03250-like"
                     /protein_id="XP_071688369.1"
                     /db_xref="GeneID:139842092"
                     /translation="MACMKLGTKTDVFRHEENTWQCTSGLPSDVTIEIGEETFNLHKF
                     PLITRSGLLTKLIGDFSSEDEHVCNVRLDDIPGGSKTFELIARFCYDVKIELTAHNVI
                     SLRCAAEFLEMTDDYADENLITITETFFIECLATWADTMKALESCEQILAESEELFLV
                     SRCITSLATKACMGYNEAINEDEIAPTSTVWNGICTSDKPEIMYDDWWHKDVCFLGLH
                     LYKRVIRAIASRGMKAETIAGSLVGYVKRYIPLLNREAGFNDANYYNTISPSEADQRS
                     LFEEIVDLLPNHKGIISTSFLLRLLRTAMILHVSPSCQENLEKRVGAQLDTAVLEDIL
                     IPNQGFNTVETLYDIDCFQRILEYYMSMDHGALYSPSIVEEGSESGTGPQSLASMTSV
                     ANLVDSFLADVAADVNMKIPKFQALAAAVPDYARPVSDGIYRAVDIYFKAHPWLTDGD
                     REQMCRLMNVQKLSLEASTHAARNERLPIRVIVQVLFFEQLRLRTSIAGWFYVSENEV
                     GDVARSQERGGVKIGMGEMRERVLGLEKECETMKYEIRKMVKTKRRWNFFCKRKSKKI
                     "
     misc_feature    58..369
                     /gene="LOC139842092"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; Region:
                     BTB_POZ; cl38908"
                     /db_xref="CDD:453885"
     misc_feature    616..1404
                     /gene="LOC139842092"
                     /note="NPH3 family; Region: NPH3; pfam03000"
                     /db_xref="CDD:460777"
ORIGIN      
        1 atggcatgca tgaagctagg caccaagact gatgttttca gacatgaaga aaatacatgg
       61 cagtgtacaa gtggactccc aagtgatgta acgattgaga tcggagaaga gacatttaat
      121 cttcataagt ttcctttgat tacaagaagt ggcctattaa ccaaacttat tggagatttt
      181 tcaagcgaag acgagcatgt ttgcaacgta cgtctcgacg atataccagg tggatctaaa
      241 acattcgagc ttatagcccg tttctgctac gatgtaaaaa tagaacttac agcccataat
      301 gttatcagcc taagatgtgc tgcagagttt ttagaaatga ctgatgatta tgcagacgaa
      361 aacctaataa caataaccga aacctttttt attgaatgtt tagccacttg ggccgataca
      421 atgaaagctt tagaaagttg tgagcaaatt cttgcagaat cagaagaatt attcctcgtg
      481 tcgcgttgca ttacttcttt agcaacaaaa gcttgtatgg gttacaatga agcaataaac
      541 gaggatgaaa tcgcgccaac ttcaactgtt tggaacggga tttgtacgtc tgataagccc
      601 gaaataatgt atgatgattg gtggcataaa gatgtatgtt ttcttggttt acatttgtat
      661 aaacgggtca ttcgggctat tgcgtcacga ggtatgaaag cagagactat agcagggtct
      721 cttgtgggtt atgttaaaag atatatacct ttattgaata gggaagcggg ttttaacgac
      781 gctaattact ataatacaat ttcgccttct gaagctgatc aaaggagtct tttcgaagag
      841 attgttgatt tacttccaaa tcataaaggg attatttcga cctcgtttct tttaaggctt
      901 cttcgtactg caatgatctt gcacgtgagc ccatcgtgtc aagagaatct tgaaaaacgg
      961 gttggggccc agttggatac tgcagtttta gaggatatct tgataccaaa tcaggggttt
     1021 aatacagtgg agacattgta tgacatagat tgttttcaaa gaatacttga atattatatg
     1081 tctatggatc atggtgcact ttattcacca agcatagttg aagaagggtc ggagagtggg
     1141 accgggcccc agtctttggc ttcaatgaca tcagtggcta atcttgttga ctcatttctt
     1201 gctgacgtgg cggctgatgt taatatgaaa atcccgaaat ttcaggctct tgcagctgct
     1261 gtccctgact atgctcgacc agtttctgat ggcatttatc gcgcggtaga tatatatttc
     1321 aaggcacatc cttggcttac agacggtgat cgagaacaaa tgtgtagact tatgaatgtt
     1381 caaaagctct cattggaagc cagcactcat gcagctcgta acgagaggct cccaattcgt
     1441 gtcattgttc aagtcctttt ctttgaacaa ctacgccttc gaacatcaat tgctggatgg
     1501 ttttacgtgt ctgaaaatga agttggtgat gtggcacgct cacaagaaag gggtggtgtg
     1561 aaaataggaa tgggtgagat gagggaacgt gttcttgggc tcgaaaaaga gtgtgaaacc
     1621 atgaagtatg agattcggaa aatggttaaa acaaagagac gctggaactt tttttgcaag
     1681 cgaaaaagta agaaaatttg a
//
LOCUS       XM_071832269             966 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842094), mRNA.
ACCESSION   XM_071832269
VERSION     XM_071832269.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139842094"
                     /note="uncharacterized LOC139842094; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842094"
     CDS             1..966
                     /gene="LOC139842094"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688370.1"
                     /db_xref="GeneID:139842094"
                     /translation="MFDWAYTHSLTYVVPPQLTLAPFFSSNAYRTSDHCPAILKFAQN
                     HKNKPKPFKFSNYITEHKKFKEAVTEGWKVDFQGHMMFRITKRLRLLKKEMRKLMVSK
                     GNLHENVINLRKDLDEVQAKLDKNPECREVRKQESITLRKYNDAIIYEEECFLKQKSK
                     IEWLRVGDSNSRYFHNVVKGRNHRGKIHAIQNQEGTIVEGREVCTIITQHFKKFLGSR
                     MTCSPIVDPSTLFTKRIGTDTAANMVTEVTTEEIRRAIFDINDSKSPGPDGYSAAFFK
                     QAWDIIGDDVVQAVKDFFHNGRLLKEINHTIISLIPKVQTPHEGD"
ORIGIN      
        1 atgtttgact gggcttacac acattcgctc acttacgttg tcccccctca gctcacccta
       61 gccccctttt tctcttctaa cgcttatcgt acctcggacc attgccccgc cattttgaaa
      121 tttgcgcaga accacaagaa taagcctaaa ccattcaagt ttagtaatta cataacagag
      181 cataaaaagt ttaaagaagc tgtaaccgaa ggctggaagg tggattttca aggtcacatg
      241 atgtttcgaa tcacaaaacg gcttcgtctg ttaaagaaag aaatgagaaa actaatggtg
      301 agcaagggaa atttacatga aaatgttatt aatttaagga aagaccttga tgaggtgcaa
      361 gcgaagctcg ataaaaatcc agagtgtcga gaagttagaa agcaggaaag cattactctc
      421 agaaaatata atgatgctat aatatatgaa gaagagtgtt ttctaaagca aaaatcaaaa
      481 attgaatggt tgcgtgttgg cgatagtaac tcaaggtatt ttcataatgt ggttaaaggg
      541 cggaaccatc gtggtaaaat ccatgctatt caaaatcaag aagggacgat agttgaaggt
      601 cgagaagttt gtacaattat tactcaacat ttcaaaaagt tcttgggctc gaggatgact
      661 tgtagcccaa ttgtggaccc ttcgactctg tttacaaaaa gaattggtac agatacagct
      721 gcaaatatgg ttactgaggt gacgacagaa gaaatcagga gggctatatt cgatataaat
      781 gactcaaaat ccccgggccc tgatggctac tctgcggcgt tttttaaaca agcttgggat
      841 attattggcg acgatgtggt tcaagctgtg aaagactttt tccacaatgg tagacttttg
      901 aaagagatca accatactat tatcagctta attccgaaag ttcaaacccc ccacgaaggt
      961 gactga
//
LOCUS       XM_071832270            3607 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842095), mRNA.
ACCESSION   XM_071832270
VERSION     XM_071832270.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3607
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3607
                     /gene="LOC139842095"
                     /note="uncharacterized LOC139842095; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842095"
     CDS             1..3339
                     /gene="LOC139842095"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688371.1"
                     /db_xref="GeneID:139842095"
                     /translation="MAADYEHDAPIEEMFSRMSMSEKREKLKALVNSRLHMKKNKKRK
                     NRKQYNNVDINEIFGNKIIKRKRLNEHVNKKSIKKVGRKLKLKQVVGLIERESGSCSI
                     HNNTRVVLDSEGICGGNQESVNEPFRISSTDDVACETLLEKGEPVEIDYGLRRLCAIC
                     RIGEDLLLCPQRGWLCGSCIKKKTESCTCDLSELPFEVSSETRNHILPYVNKLRDYWH
                     RGHNAIFFDCQDRLRKVVFFILSLLDNVKKPILIIAANNALSPWEDEFQKWNKLTTFV
                     TYKGSNDARAHIRANEFYSENGSVKFQVLSSSREDIAEDLEMVNQIKWGLIVIDRCQS
                     PKISTHYKKLKMLEADMKLLTLTSEIADYESILSLLDPKFEEIDTDVNMETSDNTTRK
                     LKEKLSPFIAFEYNYTREFKEYWVPVHLSQMQIKQYCSLLDSNMEVLSSCLWDSSPLH
                     AILTQTQKCCDHPYLVDPTLRNSSKKDAAVDTLGAEINVSGKLQLLDKFLLEIERREL
                     KVLILYQPVANSEKISIGDILDDLVDRRFGQDFYVRIPEKITCNSIRKKKKQALEDFN
                     NLQSTKFICLLDYHSCHSSICLSNVDVVILFNSNWNPLNDIRALQKITYECGPVRVFR
                     LYSAFTLEEKALIISKEGTILDVNDYNVNSTVFQQLLAWRVSYLFGKLESETEDSEAS
                     SLFINNLVGELSSLLRKKSGGPTSCSHISKAELKDGSYCRSILLLGEMENKSSSIEDE
                     LINDEPMTFWTNLMTDNHQKQKNSSNRLSRRVQNSTKNSGFWYEDDEIFSVMIKRKPR
                     SKRKVCDENKKRKFPGWCAQHIGGHRSSERKVCNKTKQRKLSGWRAQRIGGHRSSKRL
                     PTPSQNNQHVCTSSPKPLGTELERIRKEQDDITKLHQEKKSHLLTECEKEILEIRKTY
                     DAMIEEFETSSMNEMKIVEDYYKLVCANNILAELLARYCDDPPNTRLLKEKNKETGTL
                     QIPDISASAYARPVNPCSTSGPNTTFSRSSPCKSGVRAPAPHLMANRSLFASNSSIQT
                     TPKPSVLESFNSSTLVPPVNPSEPIYNQRSHLCFSEQISSGLEERVPAPNLTMPDPFF
                     IDPFPNLSTSPKTPLKKEDLARST"
     misc_feature    <745..>1902
                     /gene="LOC139842095"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional; Region: PLN03142"
                     /db_xref="CDD:215601"
ORIGIN      
        1 atggctgctg actatgagca tgatgctccc atagaagaaa tgttttcaag aatgtcgatg
       61 tcggagaaac gagaaaagct taaggcgtta gtgaattcaa ggttacatat gaagaagaac
      121 aagaagagga agaacagaaa acaatataat aatgttgata taaacgagat ttttgggaac
      181 aaaattataa aacgaaaaag attaaatgaa catgtgaaca aaaaatcgat caaaaaagtt
      241 ggaagaaagt tgaagctaaa acaagttgtc gggttaatcg aacgagagtc tggttcgtgt
      301 tctatacata ataacacaag ggtcgtgtta gattcggaag gaatttgtgg tggtaatcaa
      361 gaatctgtga acgagccttt ccgtatctct tcaacggatg atgtggcttg tgagactctg
      421 cttgaaaagg gtgaacctgt tgagattgat tacgggttga gacgtttatg tgcaatctgc
      481 aggattggtg aagatctttt gttatgccct caacgaggat ggctttgcgg ctcatgtata
      541 aaaaagaaga ccgaatcttg cacttgtgac ttatctgagt taccattcga ggtttcaagt
      601 gaaactcgta atcatatact tccgtatgtt aataaacttc gtgattattg gcaccgaggt
      661 cacaatgcta ttttctttga ttgtcaggac cggctacgta aggtggtatt tttcatatta
      721 tcgttactgg ataacgttaa aaaacctatt ctaatcatag ctgctaataa tgctttatcc
      781 ccttgggagg acgaatttca aaaatggaat aagctcacta ctttcgtaac atacaaaggg
      841 agcaacgatg cccgggccca cattagagca aacgaatttt acagtgaaaa tgggtctgta
      901 aagtttcaag tgctttcatc ttctcgagaa gatattgctg aggatctgga aatggttaat
      961 caaattaaat ggggattaat agttattgat cggtgccaga gccccaaaat ctcaacacat
     1021 tataagaaac ttaaaatgct cgaggctgat atgaagctac taacactaac cagtgaaata
     1081 gcggactacg aaagtattct ttcgttgctt gatcctaagt tcgaagagat agatacagac
     1141 gtcaatatgg aaactagtga taatactact cgcaaattga aagaaaagtt gtcacctttt
     1201 attgcgtttg agtacaacta cactcgcgag ttcaaagagt attgggtccc ggttcatctt
     1261 tctcaaatgc aaatcaaaca atattgttca ttgttagatt caaatatgga ggtactttcg
     1321 tcctgtttat gggacagctc tccactccat gcgattctga cccaaaccca aaagtgttgt
     1381 gaccacccgt atctggtgga ccctactttg cgtaattcgt ccaaaaaaga tgctgccgtt
     1441 gatacattgg gtgctgaaat taatgttagt ggcaaactgc agcttcttga caagtttttg
     1501 ttagagattg aacggcgtga attaaaagta cttattcttt atcagccagt ggctaattct
     1561 gaaaagatat cgattggaga tattttggat gatctcgtcg atcgtagatt cggtcaagat
     1621 ttctatgtaa gaataccaga aaagattaca tgcaattcta tacgtaaaaa gaaaaaacaa
     1681 gcgttggaag acttcaacaa tctacagagt acaaagttca tatgcctact cgattatcac
     1741 tcgtgtcatt caagcatttg tctttcgaat gtagacgttg tgattctttt caacagtaat
     1801 tggaacccgc tgaacgacat acgagccttg cagaagatca cttacgagtg tgggcccgtg
     1861 agagtcttcc ggttatattc agcattcact ttagaagaaa aggcgttaat tatttcgaaa
     1921 gaaggaacaa ttcttgatgt caatgactat aacgttaatt cgacagtgtt tcaacaactt
     1981 ttagcttggc gcgtgtctta cttatttggt aagctggaaa gcgaaactga agattctgaa
     2041 gcgtcgtcat tattcataaa taacttggtt ggtgagctgt catcgttgtt gcgaaagaaa
     2101 agtggaggtc ccacaagctg ttcacatata tctaaagcag aacttaaaga tggaagttat
     2161 tgtagaagta ttttgttgtt gggtgaaatg gaaaacaaaa gtagttcgat tgaagacgag
     2221 ttgataaatg atgaacctat gactttttgg actaatttga tgacagataa tcatcaaaaa
     2281 cagaaaaatt cgagtaacag attatctcga agggttcaaa attcgaccaa aaactctggt
     2341 ttctggtacg aagatgatga aatattttcc gttatgatta aaagaaaacc aagaagcaaa
     2401 agaaaagtgt gtgatgaaaa caagaaaaga aaatttccag ggtggtgtgc acaacatatt
     2461 ggcggtcatc gatcatctga aagaaaagtg tgtaataaaa ctaagcaaag aaaactttca
     2521 gggtggcgtg cacaacgtat tggcggtcat cgatcatcta aaaggttacc tacccctagc
     2581 cagaacaatc aacatgtttg tacttctagt ccaaaacctc tgggaaccga attagaaaga
     2641 attcgaaagg aacaagatga catcaccaag ttgcatcaag aaaagaaatc ccatctcctt
     2701 actgaatgtg aaaaagagat attagagata cggaagacgt atgatgcaat gatcgaggaa
     2761 tttgagacga gttcaatgaa cgaaatgaag attgttgaag attattacaa gcttgtttgt
     2821 gctaataaca tattggccga gcttttggca cgttattgcg atgatcctcc caatacacgt
     2881 cttttgaagg aaaaaaataa agaaacgggc acattacaaa ttcccgacat ctctgcatct
     2941 gcatatgcac gaccagtgaa cccatgttca accagcgggc ccaacactac tttctctagg
     3001 tcaagtccat gtaaatcggg ggtacgggcc ccagcccctc atcttatggc aaaccgatca
     3061 ttgtttgcat caaattctag catccaaacc acaccaaaac cttccgttct tgagtcattc
     3121 aactcatcta cactagtacc accagtgaac ccaagcgaac ccatttataa ccagcggtcc
     3181 cacctttgtt tctccgagca aatttcaagc ggattagaag aacgtgttcc agctcctaat
     3241 ctgaccatgc ctgacccgtt ttttattgat ccatttccca atttgtcaac ttctccaaaa
     3301 acgccgttaa agaaagaaga tcttgcccgt tcaacctgac agatgttacg atattggtga
     3361 tcctagtctt tcgttctggg gcacacttca gtttcttcgt agctttttgg atagtttagc
     3421 aatcagaatt ttaaaatagt tagcatacaa cagtgcagta catggtcggt tagcatagat
     3481 acaagaacat gttacacgat atcaaatttt gtcgatctta cgtaggtaca tgtaacagtg
     3541 actcgacagg gacatgttat gttacaaaca ctgatgtata tgctacaaac ttttgttgat
     3601 attttgc
//
LOCUS       XM_071832271            1728 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable leucine-rich repeat
            receptor-like protein kinase At1g68400 (LOC139842096), mRNA.
ACCESSION   XM_071832271
VERSION     XM_071832271.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1728
                     /gene="LOC139842096"
                     /note="probable leucine-rich repeat receptor-like protein
                     kinase At1g68400; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139842096"
     CDS             1..1728
                     /gene="LOC139842096"
                     /codon_start=1
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase At1g68400"
                     /protein_id="XP_071688372.1"
                     /db_xref="GeneID:139842096"
                     /translation="MFMFVKSDIITQEFYDEERNALIPFRDSMVSNLNIHGNWTGPPC
                     RNNMSRWIGIGCSNSHVIHLTLESINLTGTLPVNFLQNVTFLSKLSLDNNSITGDLPN
                     LTNLVFLESIFLSRNHFSGPIPLNYIELPKLTTLELQENEITGTIPSFDQDSLTALNL
                     SYNQLYGPIPDTKILQRFSVGSFNHNSGLCGQPVEISCESPSKDKKKKAFKVWSIIMI
                     AAAAAIVPFFVILGLYCCYRRFQRKQVKKDAADEQRPTDGAVKKARWSASTSDPERTV
                     DLEFVDNRKPVFDIDELLRSSAEVLGKGSLGTTYKATMESGLVVVVKRLRDMNSISKK
                     EFVQQMQLLGKLRHQNLVEMTSFYYSKEEKLVIHEFIQDGSLFELLHESRGIGRIPLS
                     WATRLEIMKDVAKGLIFLQQSLSYQKVSHGNLKSSNVLIHFTGETTHAKLTDFGYLPL
                     LPSSQKSSLAIGKCPEVLDGKKPTHKSDVYCFGMLLLEVITGKVTGDGNHEDLSDWVK
                     SVVNTDWSMDIFDLEMLVEKEGHEDMFKIAELALECMDETPERRPKMSQILIRLEEIH
                     HLEIGIVVN"
     misc_feature    <64..1689
                     /gene="LOC139842096"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    187..255
                     /gene="LOC139842096"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    256..324
                     /gene="LOC139842096"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    325..396
                     /gene="LOC139842096"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    397..462
                     /gene="LOC139842096"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    901..1695
                     /gene="LOC139842096"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(901..912,919..921,925..927,961..963,967..969,
                     1054..1056,1102..1113,1267..1269,1279..1284,1288..1290,
                     1327..1332)
                     /gene="LOC139842096"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgttcatgt tcgttaagtc cgatattata acacaagaat tctacgatga ggaaagaaac
       61 gctttgatcc catttcggga ctctatggta tcaaatttga acatacacgg gaactggact
      121 gggcccccgt gtaggaacaa tatgagcagg tggatcggaa ttggttgttc caattctcat
      181 gtgatccacc taactctaga atcaataaac ttaacgggaa cacttcccgt taatttttta
      241 caaaacgtta cttttttatc aaaacttagt cttgacaaca attctattac tggagatctt
      301 cctaatctaa ccaatctcgt gttcttggaa tccatattcc tttcaagaaa ccatttctcg
      361 ggtcctattc cgttgaatta catcgagcta cccaagctca caacgctcga acttcaggaa
      421 aatgagataa cgggaacaat accatcgttc gatcaagatt cattaaccgc actcaacttg
      481 tcatacaatc agctttatgg accaatccca gatacgaaaa ttttacaaag attcagtgtt
      541 ggttcattca atcataattc aggattatgt ggacagcctg ttgagatatc atgtgagtct
      601 ccctcaaaag acaagaagaa gaaagctttc aaagtatgga gtataatcat gattgctgct
      661 gcagctgcta tcgtaccatt tttcgtgatt ctgggtttgt actgttgtta cagaagattt
      721 caacgaaaac aagtcaagaa agatgcagct gacgaacaac gtcctactga tggtgcagta
      781 aagaaagctc gatggtctgc aagtacgtct gatccggaaa gaacagtaga tttggagttt
      841 gttgacaacc gtaagcctgt ttttgacata gatgagttgc tgaggtcatc ggctgaagtg
      901 ctcgggaagg gaagcttagg cacgacgtac aaggcaacaa tggaatcggg tttggttgtt
      961 gttgttaaaa gattgagaga tatgaattct ataagcaaga aggaatttgt acaacaaatg
     1021 cagttacttg ggaagttaag gcatcaaaac cttgttgaaa tgacttcgtt ttactattcg
     1081 aaagaggaga agttggtcat tcatgaattc atccaagatg gaagcttatt cgagttatta
     1141 catgagagta gaggaattgg gagaatacca ctcagctggg caacaaggct agaaatcatg
     1201 aaggatgtag caaagggtct aatcttcttg caacaatctt tatcgtatca aaaagtgtct
     1261 cacggaaacc tcaaatcgtc gaacgtactt atccacttta ctggtgaaac cacacacgcc
     1321 aaactcacag atttcggcta cttgccgcta ttaccttcat cacaaaagtc aagcttggct
     1381 atcgggaaat gccccgaggt tttggatggg aagaaaccga cgcataagtc agatgtttac
     1441 tgtttcggga tgttgctgtt ggaggttata acaggaaaag taacaggaga tggtaaccat
     1501 gaagatctgt cggattgggt caagagtgta gtgaatacag actggtcaat ggacatattt
     1561 gacttggaaa tgttagtaga gaaagaaggg catgaagata tgttcaagat agctgaatta
     1621 gcacttgaat gtatggatga aacacctgaa agaaggccta aaatgtctca aatcttgatc
     1681 agattagaag aaattcacca tcttgaaata ggcattgtag tcaactaa
//
LOCUS       XM_071832273             762 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842097), mRNA.
ACCESSION   XM_071832273
VERSION     XM_071832273.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..762
                     /gene="LOC139842097"
                     /note="uncharacterized LOC139842097; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842097"
     CDS             1..762
                     /gene="LOC139842097"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688374.1"
                     /db_xref="GeneID:139842097"
                     /translation="MAKHVLIKDRICLATPTLTVNWEWMRVPTGRTKDELDCLLLFLN
                     SYRFDRDIPDSWIWSMSNNGRFSVKQMTKLINEKTIARFDVVQETLHNSLVPKKLEVF
                     VWRALKKRLPVMIELDKRGIDLHSIRCALCDDDLEYVEHALIFCKHSLDVWNRVCRWW
                     GIGNFPNLSLSEILCGNNPFHPSCLGKQIWQEVEWVCAYYIWKNRNNIVFRGASWTAP
                     TTLNEIQLKSFEWIATRIKGVKIDWLSNPIVYLNF"
     misc_feature    196..456
                     /gene="LOC139842097"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcgaagc atgttctcat caaagataga atctgtttag cgactcctac cttaacagtc
       61 aactgggaat ggatgagggt acccactggc cgaacaaagg atgaactcga ctgtctgctg
      121 ctgtttctca attcctacag gttcgatcgt gacatccctg atagttggat atggtcaatg
      181 tcgaataatg gcaggttctc ggtgaaacaa atgacgaagt taattaatga aaaaacaatt
      241 gcgagattcg atgtggtcca agaaacactc cataattctc ttgttccaaa aaaattggag
      301 gtttttgtat ggagagcttt gaagaaacgt ttaccggtta tgattgagct tgataaacga
      361 ggaattgacc ttcactcgat tcgttgtgcg ttatgtgatg atgacctaga atatgtggaa
      421 catgccttga tcttttgtaa gcattccttg gatgtttgga accgtgtttg cagatggtgg
      481 ggtatcggca atttccccaa cctaagcctc agtgagattc tttgtggcaa taatccgttt
      541 catccttcgt gccttggtaa acaaatttgg caagaggtgg agtgggtttg cgcctattac
      601 atttggaaaa atcgcaacaa catagtcttt cgtggtgctt catggacggc cccaactact
      661 ctaaacgaaa ttcaactcaa atcattcgag tggattgcga ctagaattaa aggggttaaa
      721 atcgattggc ttagcaaccc tatcgtgtat ttgaacttct aa
//
LOCUS       XM_071832274             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg01250-like (LOC139842098), mRNA.
ACCESSION   XM_071832274
VERSION     XM_071832274.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139842098"
                     /note="uncharacterized mitochondrial protein
                     AtMg01250-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139842098"
     CDS             1..576
                     /gene="LOC139842098"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg01250-like"
                     /protein_id="XP_071688375.1"
                     /db_xref="GeneID:139842098"
                     /translation="MGSGDKWRKWIISCLSSASISILVNGSPTKEFSLGRGIRQGDPL
                     SPFLVILASEGLNILTKAAIDRGLFKGVEIGNDKVLLSYLQYVDDTIFFSEWSRSNVY
                     SLQNLIKCFELASGLKVNFHKSCLYGIGVNFDEVNHMANRIGCVVGTLPFTYLGLPIG
                     CNSLDALDIPFNKSFRKVIGDGSATRFWEDH"
     misc_feature    <109..477
                     /gene="LOC139842098"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    121..123
                     /gene="LOC139842098"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgggatccg gtgataagtg gagaaagtgg atcatctctt gtctaagctc ggcttctatc
       61 tctattctag tcaacggctc cccgaccaaa gaattctcat taggtcgagg catacgacaa
      121 ggcgatcctc tatcaccttt cttggttatt cttgcttccg agggtttaaa tatactcacc
      181 aaagccgcaa ttgatagagg cctatttaag ggtgttgaaa ttggaaatga taaagtgctt
      241 ttatcgtatc tccaatatgt ggatgacacc atcttcttta gtgaatggag tcgctcgaat
      301 gtgtatagtc ttcaaaactt gatcaagtgc ttcgaactcg cttccggact taaagtaaat
      361 ttccataaaa gttgtcttta tggcattggt gtcaactttg atgaggttaa tcacatggct
      421 aatagaatcg gttgcgtagt aggtactctc ccatttacct accttggttt gcctattggg
      481 tgtaactcat tggatgcgct agacattcct ttcaacaaat ctttcaggaa agtgataggt
      541 gatggttcgg ctactcgctt ttgggaagat cattag
//
LOCUS       XM_071832275             753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842099), mRNA.
ACCESSION   XM_071832275
VERSION     XM_071832275.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..753
                     /gene="LOC139842099"
                     /note="uncharacterized LOC139842099; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842099"
     CDS             1..753
                     /gene="LOC139842099"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688376.1"
                     /db_xref="GeneID:139842099"
                     /translation="MANDENDGWEYLLDIDDSDLTQYVSVSKPTQTILLPTESPPFPR
                     PLESPQLNRQKQKQPISPQRPVLRGFGSNKKNKLSYRIPGPAGVFQDAYELQNNENNV
                     VDDMSTQDFVREIINRPEADDSFTLDPWLRAMKFAYPYGGRSDITSILKQRRFLPADQ
                     VVGVVKTYEKNCVGDLSVTLKDTTGAIRGTLSSKIIDGVHGKYEGVKGIREGAVLVLQ
                     NCSIFCPSVKVKILNITRKALIKVFFKVGGST"
     misc_feature    472..729
                     /gene="LOC139842099"
                     /note="Homologous recombination OB-fold protein; Region:
                     HROB; pfam15072"
                     /db_xref="CDD:464486"
ORIGIN      
        1 atggccaatg atgagaacga tggatgggaa tacctacttg atattgatga ttccgatctc
       61 actcaatatg tatcagtttc aaaacccact caaaccatat tgttacccac tgagtcgcca
      121 ccattccccc gacctttaga gtccccccaa cttaatcgtc aaaaacaaaa gcaacctatt
      181 tcaccacaac gacccgttct tcgcggtttc gggtctaaca aaaagaacaa attatcctac
      241 cgaattcctg gacccgctgg tgttttccaa gatgcgtatg aacttcaaaa taacgagaat
      301 aacgttgtgg atgacatgtc tacgcaagat tttgtaaggg aaataatcaa cagacctgaa
      361 gcggatgatt cgtttacact ggatccgtgg ttacgcgcga tgaagtttgc atatccgtac
      421 ggaggtagat ctgatataac aagcattttg aaacagcgta gatttttacc agctgatcaa
      481 gttgttggtg ttgttaagac ttatgagaaa aattgtgtcg gtgatttgtc tgtaacgctc
      541 aaagacacta cgggtgctat tcgaggaaca ttatctagca agatcatcga tggtgtacat
      601 gggaagtatg aaggtgtaaa aggcatacgt gagggagctg ttctggtgct acaaaactgt
      661 tctatctttt gccctagtgt gaaggttaaa atccttaaca ttacacgcaa ggcgttaatt
      721 aaagtgttct ttaaagtcgg tggatctacg tag
//
LOCUS       XM_071832276            1338 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides CAX-interacting protein
            4-like (LOC139842101), mRNA.
ACCESSION   XM_071832276
VERSION     XM_071832276.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1338
                     /gene="LOC139842101"
                     /note="CAX-interacting protein 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139842101"
     CDS             108..1046
                     /gene="LOC139842101"
                     /codon_start=1
                     /product="CAX-interacting protein 4-like"
                     /protein_id="XP_071688377.1"
                     /db_xref="GeneID:139842101"
                     /translation="MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKEDN
                     KKSAQPQSSNAEPEGENAYASFQGLLALAKITGSNADEARGSCKKCGRVGHLTFQCRN
                     FLSIKEDKDKDPEAIQAAVNAGLAKLKGNGKRVSESSDESDEDESESSDSDYDSEIER
                     AIALKYGKKVSSKLNSVRKKKDYDSDEDELDYEKKFKKKKRGRSKKRSVKRSISDTDD
                     EESGRKKTKEKRRRKDESSDEDRERRSHRRKSRKEKRRSHRYSDSSEDDLVRRHKRKS
                     NKSKRKSESDSDDGSSEDSRVGRDKRRPERRNRKYS"
     misc_feature    354..>413
                     /gene="LOC139842101"
                     /note="Zinc knuckle; Region: zf-CCHC_3; pfam13917"
                     /db_xref="CDD:404753"
ORIGIN      
        1 cgtcgatcat acagacttca tctccaatcc tcattgacaa aattgcatct cttcagcgct
       61 cgttaaaatc atcataatac ttacagatat ccttttgagc tctcaagatg ccggccactg
      121 caggcagggt gcgtatgcca gctaacaatc gggtgcacag tagtgctgca ttacaaaccc
      181 atggcatatg gcaaagtgcg attggatatg acccttatgc ccctaacaaa gaagataaca
      241 agaaatcggc ccagcctcaa tcttccaacg cagaacctga gggagaaaat gcttatgcta
      301 gttttcaagg tttacttgca cttgccaaaa ttacagggtc caatgctgac gaggcacgtg
      361 ggtcctgcaa gaaatgtggt cgtgtgggtc atttgacatt tcagtgtaga aacttcttga
      421 gcatcaaaga agataaagac aaggatccgg aagctattca ggctgctgtt aatgcagggt
      481 tagcgaaact gaaagggaac gggaagagag ttagtgagag ttcggatgag agtgatgaag
      541 atgagagcga gagttcggat tcggattatg attcggagat tgaacgggct attgctttaa
      601 aatatgggaa gaaggttagt agtaaattga attctgtaag aaagaagaaa gattatgatt
      661 cagatgaaga tgagttggat tatgagaaga agttcaagaa gaaaaaaagg ggtaggtcga
      721 agaagagaag tgttaagcgt agtattagtg atacggatga tgaagaaagt ggtaggaaaa
      781 agacgaaaga gaaaaggagg agaaaggatg agtcatcgga tgaggatcga gaacgtcgat
      841 cgcatcggag gaagagtagg aaggagaaaa ggaggagtca taggtattcg gatagttctg
      901 aagacgactt ggttagaaga cataagagga agagtaataa gagtaaacga aagtctgagt
      961 cagattcgga tgatggtagc tctgaggatt cgagggttgg cagggacaaa agaaggcccg
     1021 agaggaggaa caggaaatat tcctgatgat tgaatggagt gttcttgttt agaaaggaag
     1081 cgggaacaat gattcgagtt tagtctactg gtgcgaatca gcaggctgct ctatttggtg
     1141 agttttagtc gtcttgtggc agcaagtaaa cttattacca ttcaactgtt gtaattttat
     1201 gagctatcag ctatccgttt gtagaaatta aacttgtacg cggtcgttat gtctgtggtt
     1261 atgtcttaca tagatctgtg tttcttttca atgtagcatc ttttactttt attatcattg
     1321 caagtgttta tggcttta
//
LOCUS       XM_071832277             663 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842102), mRNA.
ACCESSION   XM_071832277
VERSION     XM_071832277.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..663
                     /gene="LOC139842102"
                     /note="uncharacterized LOC139842102; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842102"
     CDS             1..663
                     /gene="LOC139842102"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688378.1"
                     /db_xref="GeneID:139842102"
                     /translation="MKALLKELPNLTAPVAGETLMLYLATSKEAISSVLVADKGQVQM
                     PVYFVSKALSGSEFNYTPIEKLMRYKPEVLGRLAKWAIELGEHEINFSPRTTIKGQIL
                     ENYLAETMVEIEASKESITIEPLESQPWELYTDGACGPKGSGARLVLTSLEGEEHTYA
                     LRFAFEATNNESEYEALVSGMRIVKQLGIKCLDAYIDSQLMANQVNGLFEARDASMQS
                     YL"
     misc_feature    49..258
                     /gene="LOC139842102"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    388..>660
                     /gene="LOC139842102"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(403..414,502..510,517..519,589..591)
                     /gene="LOC139842102"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgaaggcac ttttgaaaga actgcctaat ttaaccgcgc ctgtggcagg agagacattg
       61 atgctgtatc ttgcgacttc gaaggaggcc ataagttctg ttcttgtcgc agataagggg
      121 caggtacaga tgcctgtata ctttgtcagt aaggcgctta gtggtagtga gttcaattac
      181 actccaatag aaaagctgat gcggtacaaa cctgaggttt tggggcgatt ggctaaatgg
      241 gccatagaat tgggggagca cgaaataaac ttctctccgc gaacaacgat taaaggacag
      301 atactggaaa attacttggc tgaaactatg gttgagatag aagcgtctaa ggaaagtatc
      361 acaatcgaac ctttggaaag tcaaccttgg gagttgtaca ctgacggggc ttgtggcccg
      421 aagggttcag gcgcaaggtt agttttgaca agtctggagg gggaagagca cacctatgcg
      481 cttcgattcg cgttcgaagc cacgaacaat gaatcagagt acgaagcact ggtgtcagga
      541 atgcgtatag tgaagcagtt gggtattaag tgtttggatg catacattga ctcgcaactc
      601 atggccaatc aagttaatgg gttatttgag gcgcgcgatg cctctatgca aagctaccta
      661 taa
//
LOCUS       XM_071832278            1175 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides S-adenosylmethionine
            synthase 3-like (LOC139842104), mRNA.
ACCESSION   XM_071832278
VERSION     XM_071832278.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1175
                     /gene="LOC139842104"
                     /note="S-adenosylmethionine synthase 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 42 Proteins"
                     /db_xref="GeneID:139842104"
     CDS             3..1175
                     /gene="LOC139842104"
                     /codon_start=1
                     /product="S-adenosylmethionine synthase 3-like"
                     /protein_id="XP_071688379.1"
                     /db_xref="GeneID:139842104"
                     /translation="METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACET
                     CTKTNMVMVFGEITTKATVNYEKIVRDTCREIGFTSADVGLDADNCKVFVNIEQQNID
                     IAQAVHGHLTKTPEEIGAGDQGLMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKT
                     CAWMRPDGKTQVTVEYRNDNGAMVPIRVHTVLISTQHDETVTNDQITADLTEHVIKPV
                     IPAQYLDTNTIFHLNPSGRFVNGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPT
                     KVDRSGAYLVRQAAKSIVASGLARRCIVQVSYAIGVAEPLSVFVDTYNTGTIPDKDIL
                     VLIKENFDFRPGMMLINLDLKRGGNYRYQKTAAYGHFGREDPDFTWETVKILKPTV"
     misc_feature    3..1160
                     /gene="LOC139842104"
                     /note="S-adenosylmethionine synthase; Region: PLN02243"
                     /db_xref="CDD:177886"
ORIGIN      
        1 aaatggagac tttcctattt acatcagaat ctgtcaatga aggacaccct gacaaactct
       61 gcgaccaagt ctcggatgca atccttgacg cttgtttaga acaagacccc gaaagcaaag
      121 ttgcatgtga gacatgtaca aagactaaca tggttatggt ctttggtgag atcactacta
      181 aagctactgt aaactacgag aagatagtcc gtgatacgtg cagagaaatc ggatttacat
      241 cagctgacgt tggccttgat gctgacaact gcaaggtctt cgtcaacatc gagcaacaga
      301 acattgatat cgctcaggct gttcatggcc acctcactaa aactccagaa gaaattggtg
      361 ctggtgacca aggtcttatg ttcggttacg cgaccgatga aacacccgaa cttatgccat
      421 tgactcatgt cttagcaact aagctcggtg ctaagctaac cgaagtcaga aagaacaaga
      481 cgtgcgcgtg gatgcgtcct gatggtaaga cacaagtgac ggttgagtac cgtaatgata
      541 acggtgcgat ggttccgatt agggttcaca cggtccttat ttcgacccaa catgacgaga
      601 ccgtgacaaa cgatcaaatc acagctgatc ttacagagca tgtgatcaaa ccggtcatcc
      661 cggctcagta tcttgacacc aacacgattt tccatctgaa cccatcgggt cggtttgtga
      721 acggtggtcc ccacggtgat gcaggtctca ccggaaggaa gattatcgtt gacacgtatg
      781 gcggttgggg ggcccacggt ggtggtgctt tttctgggaa ggatccaact aaggtggaca
      841 ggagtggtgc ttatcttgtt aggcaagcgg ctaagagtat agtggcttcg gggcttgcac
      901 gcaggtgtat tgttcaggtt tcttatgcta ttggtgtggc tgaaccgcta tccgtgtttg
      961 ttgacacgta taatacagga acgatcccag ataaggatat ccttgttctg attaaggaga
     1021 attttgactt taggccaggg atgatgttga ttaatcttga tttgaaaagg ggcggtaatt
     1081 acaggtatca gaagactgct gcttatggtc attttggtcg tgaagatccc gatttcacct
     1141 gggagactgt caagattctc aagcctacag tttga
//
LOCUS       XM_071832279            1113 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable pectinesterase 15
            (LOC139842105), mRNA.
ACCESSION   XM_071832279
VERSION     XM_071832279.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1113
                     /gene="LOC139842105"
                     /note="probable pectinesterase 15; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842105"
     CDS             1..1113
                     /gene="LOC139842105"
                     /codon_start=1
                     /product="probable pectinesterase 15"
                     /protein_id="XP_071688380.1"
                     /db_xref="GeneID:139842105"
                     /translation="MNTKRSKLFWLSVISIALLSIILSLYNKDSNITWNIPIPDFVKR
                     IIDRIQWRTLSCDANKWNSPLIAKYGVATVLTVDQKGCGKFRTFKQAVAAVPDKSPKP
                     TLIIFDAGVYMEKVDVPKTKFNLIIQGQGYQNTFLAWNDTAASSNGTVFSYSVCVYAP
                     NFRAHDISFKNTAPNPKQGVQGGQAIALRISGDQAAFYNCGFYGFQDTLYCESGRHYF
                     KQCFIEGSTDFVFGNGRSLFEDCTINSVATGVGITGAIAAQQRNTSAEQTGFSFVNCR
                     IVGIGNIWLGRAWGPYSITVFIRTSMSAIINPEGWNNFKDPSRDQKVFFGEHACTGPG
                     SSFKGRVKYAKNLSVAEAKPYMDISYINGNLWLPKG"
     misc_feature    217..1101
                     /gene="LOC139842105"
                     /note="probable pectinesterase; Region: PLN02304"
                     /db_xref="CDD:215173"
ORIGIN      
        1 atgaacacca aaagaagtaa actattttgg ctatctgtta tttccattgc tctcctctcc
       61 attattttat cactctacaa caaggattca aacataactt ggaacattcc aatacccgat
      121 ttcgtaaaac ggatcatcga tcgaatacag tggcgtacgc tttcttgtga tgcaaacaaa
      181 tggaactctc cacttatagc taaatacggt gtagcgacag ttttaaccgt tgatcaaaag
      241 ggttgtggca aattcagaac ctttaaacag gcagtggctg ctgttcctga taaaagccca
      301 aaaccaactc ttattatctt cgatgcaggc gtatacatgg agaaagtaga tgtgccaaaa
      361 actaagttta atctgataat tcaaggccag ggttatcaaa atacatttct tgcttggaat
      421 gatactgcag cttcaagtaa tggcactgtt ttcagctatt cggtttgtgt ttatgcccca
      481 aatttcagag ctcatgatat cagtttcaag aacacagctc ctaacccaaa acaaggtgtc
      541 caaggaggac aagcgattgc tttgagaatt agtggtgatc aagcagcttt ttataattgt
      601 gggttttatg gatttcaaga tactctttat tgtgaatcag gaagacatta tttcaaacag
      661 tgtttcatcg aaggttcgac agattttgtc tttggaaacg gtagatcatt atttgaggat
      721 tgtacaataa attcggtagc gactggtgtt gggataacag gagcaatagc ggcacaacaa
      781 aggaatacgt cagcagagca aacagggttt tcatttgtga actgtaggat tgttggaata
      841 ggtaatatat ggttaggaag agcgtggggt ccatattcga taaccgtttt cataagaact
      901 tcaatgtctg caatcattaa tcctgaaggc tggaataact ttaaagatcc ctctagagat
      961 cagaaagttt tcttcggaga acacgcgtgc actggtccag ggtcaagttt caaaggacgg
     1021 gtgaagtatg ctaagaattt gagtgtggca gaggccaaac cgtacatgga tatctcttac
     1081 ataaacggaa atttatggct tcctaaaggc taa
//
LOCUS       XM_071832280            3063 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842106), mRNA.
ACCESSION   XM_071832280
VERSION     XM_071832280.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3063
                     /gene="LOC139842106"
                     /note="uncharacterized LOC139842106; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842106"
     CDS             1..2910
                     /gene="LOC139842106"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688381.1"
                     /db_xref="GeneID:139842106"
                     /translation="MKRELAYALEAQSQFSCFVGRTRSSKGSSDQFTDTKQKITRSSV
                     NRSVKLTDEVSLNRRNKRIKNAIPDFDSVSVDKSKDDEESAAVKVVNAVEEDEVEAVN
                     TVEEAAVEVVTGDESSAAEVANVRVGSVVAEVANGGEGSTVPELESAAAAEVAASEGK
                     GGREVEEMYVKRKKKKNGVNGNSNTPKRFTRSLLKEKDENVEELETPTMKKLELKISK
                     MIGLRRMPTNSKELFETGLLEGFRVYYKLDKEQGNLHGLIKGSGILCSCNLCDGNKVI
                     SISQFEMHAFKSYRHAIKHIYLENGKSLLDLIEICKATALETSEVARQTLISSLPVKG
                     TSLCTNCNGSIEPSTGNLLFCESCLNMKQVQAEPVVATHEDVRITSPVLEAFTSNTLS
                     ISSDKKSQRGRKRKISSPVPESPTSNALSISPHKKSRRGKKRKSSNMDMTSSRSVSKA
                     KPPPKKMKSKILKRSPKPGCLSTSTESATRCTASQQTKGKKPTIKNQHLHWAVFEKGG
                     LPDGTELTYFCQGKKLLEGYKKGRGIFCSCCQTVVSASVFEAHAGWASRKKPYENIYI
                     SNGVSLHEYSVSLKINENRRCSVKFNDDACRICWDGGELVLCDGCPRSFHKECVDLDS
                     IPRGKWYCKYCQQSMKLVADNANAVAAGRVTGIDPIEQIMTRCIRIVKNPENTDLVAC
                     VLCRCLDFSKKVFNDRTVIVCDQCERDYHIGCLRDNNMADLKALPKGKWFCCAGCERI
                     CSDLANLLTHEPTMIPDNLLTILRQKQNDNSVDTVANSELRFVLLSGKNASRDTRKLL
                     AQTVDIFHECFNPIVDATSGRDFIPSMVYGRKIWSQDFARMLCAILTIDSNVVSVGVF
                     RVFGEDIAELPLVATSKGNQGKGYFNVLFNCIERLLSSIKVKKIILPAAEEAKSIWTN
                     KFGFETIAEPQLTELRQTCSGMMTFKGTSMLQKEILEAQNGVIVAGDDIINPSVE"
     misc_feature    766..933
                     /gene="LOC139842106"
                     /note="Tify domain binding domain; Region: TDBD;
                     pfam16135"
                     /db_xref="CDD:465033"
     misc_feature    1579..1737
                     /gene="LOC139842106"
                     /note="Tify domain binding domain; Region: TDBD;
                     pfam16135"
                     /db_xref="CDD:465033"
     misc_feature    1786..1905
                     /gene="LOC139842106"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     Region: PHD1_AIRE; cd15539"
                     /db_xref="CDD:277014"
     misc_feature    order(1801..1821,1825..1827,1849..1851,1873..1890)
                     /gene="LOC139842106"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:277014"
     misc_feature    2044..2199
                     /gene="LOC139842106"
                     /note="PHD finger superfamily; Region: PHD_SF; cl22851"
                     /db_xref="CDD:473978"
     misc_feature    order(2098..2109,2119..2121,2191..2193)
                     /gene="LOC139842106"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276966"
     misc_feature    <2527..2814
                     /gene="LOC139842106"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; Region: ArgA; COG1246"
                     /db_xref="CDD:440859"
     polyA_site      3063
                     /gene="LOC139842106"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgaagcgag agctagcgta cgcattggaa gctcaatctc agttctcatg cttcgtcggc
       61 cgtactcggt cttcaaaagg ttcttccgat cagtttactg atactaaaca gaagattacg
      121 cgatcgtctg ttaatcgttc tgtgaaattg actgatgaag ttagtctgaa tcgacggaat
      181 aaaaggataa aaaatgcgat tccggatttc gattcggtta gtgtcgataa atcgaaggat
      241 gatgaagaat cggcggcggt caaagtagtc aacgccgtag aagaagacga ggttgaagct
      301 gttaataccg tcgaagaagc ggcggtggaa gtagttactg gtgatgaatc ttcggcggct
      361 gaagtggcca atgtcagagt aggatcggtg gtggcggaag tagccaatgg cggagaagga
      421 tcgacggtgc cggaattaga atcggctgcc gcggcggaag tagcggcgtc tgaagggaag
      481 ggtgggagag aggtggagga gatgtatgtg aagcggaaaa agaaaaaaaa tggggtgaat
      541 ggtaatagta atacacctaa gagatttacg cgatcgttat tgaaggagaa agatgagaat
      601 gtggaagaat tggagactcc aacaatgaag aagttggaac tgaaaatatc taaaatgatt
      661 gggttgagaa gaatgcctac taattcgaag gagctatttg agaccggttt gctagagggt
      721 tttcgcgttt actacaaatt ggataaggag caaggcaatc tacacggact aatcaaaggt
      781 tccggcatat tgtgttcctg caatctgtgt gacggtaaca aagttatttc aatatctcag
      841 tttgagatgc atgcattcaa atcgtaccgt catgcgataa agcatatata ccttgaaaat
      901 ggaaaaagtc tccttgactt gattgaaatt tgtaaagcaa ctgcgttgga aacatcagaa
      961 gtagctcgtc aaaccctaat tagttcattg cccgtgaagg gaacttcctt gtgtactaat
     1021 tgcaatggct caattgaacc atctaccgga aatttgttat tttgtgaatc ttgtttaaat
     1081 atgaaacaag tgcaagctga accagtggtt gcaactcatg aggatgttag gataacaagt
     1141 ccggttcttg aggccttcac aagcaacacc ttgtcaattt cgtcagataa aaagagtcaa
     1201 cgagggagaa aaagaaagat atcaagtccg gtgccagagt cccccacaag taacgccttg
     1261 tcaatttcgc cacacaaaaa gagtcgacga gggaaaaaaa gaaagtcatc aaacatggat
     1321 atgacatcat ccagaagtgt ctcaaaggct aaaccgccac caaagaagat gaaatcaaag
     1381 atcctaaaaa ggtcaccaaa gcccggttgt ttatcaacgt ctactgagag tgctacgaga
     1441 tgtaccgcct cacagcagac gaaaggaaaa aagccaacaa taaagaatca gcacctacat
     1501 tgggcggttt ttgagaaagg aggtttacca gatgggactg aactgactta cttttgtcaa
     1561 ggaaagaaat tgctagaagg ttacaagaag ggacgtggaa ttttttgttc ctgctgccaa
     1621 acagtagtca gcgcctcagt gttcgaagct cacgctggtt gggcttctcg taaaaaaccc
     1681 tatgaaaaca tctacatctc aaatggagtg tctcttcacg aatattcagt ctcgttaaag
     1741 attaatgaaa accgaagatg ttctgttaag tttaatgatg atgcatgtag aatttgttgg
     1801 gatggtgggg aactcgtgtt atgtgatgga tgcccgaggt cctttcataa agaatgtgtt
     1861 gatttagata gcatccctcg tggaaaatgg tattgtaaat attgtcaaca gtcgatgaag
     1921 cttgtggcag ataatgctaa tgctgttgca gctggaaggg ttaccgggat tgatcctatt
     1981 gagcaaataa tgacacgttg tatccgtatt gttaaaaacc ctgaaaacac tgaccttgtt
     2041 gcatgcgttt tatgcagatg ccttgatttc agtaaaaaag tttttaatga taggacagtt
     2101 attgtttgcg atcaatgtga aagggattat cacatcggct gcctcagaga taacaatatg
     2161 gctgatttga aggcattgcc aaaagggaag tggttctgct gcgcgggttg cgagagaatt
     2221 tgttccgatt tggcaaactt gctgactcat gaacccacaa tgatccccga taatctgtta
     2281 accatattga ggcaaaaaca aaacgataat tcggttgata ccgttgcaaa ttctgaattg
     2341 agattcgtgc ttcttagtgg caagaacgct tctcgcgata ccagaaagtt gctggcacaa
     2401 actgttgata tttttcatga atgctttaac cccatcgttg atgcaacgtc tggacgcgat
     2461 tttattccct caatggtcta tggaaggaaa atttggagtc aagactttgc aaggatgctc
     2521 tgtgcaatat tgactataga ctcaaatgta gtatcagttg gggtgtttcg tgtttttgga
     2581 gaggatatag ccgaacttcc cctagttgct acaagtaaag gtaaccaagg aaaggggtac
     2641 tttaatgtac tattcaattg cattgagagg ctactttcat ctatcaaagt aaagaagatt
     2701 atccttccag ctgccgagga ggctaaatcg atatggacaa ataagtttgg ttttgaaacc
     2761 atagctgaac cacagcttac cgaacttagg caaacgtgct cgggtatgat gacatttaaa
     2821 ggaacatcca tgctacaaaa ggaaattctt gaagctcaaa acggtgttat agttgcaggt
     2881 gatgacatta tcaacccttc cgttgaatag tgggatcgat gaagccattt ttatttatct
     2941 tttggtagaa caattgggta gatcatacat atgatagtct tttgaagttc tcccatttaa
     3001 cattattgtg gaattttgat ggcaagtagt tttaaatggt aaatatatct tttctgcgac
     3061 caa
//
LOCUS       XM_071832281            1141 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842107), mRNA.
ACCESSION   XM_071832281
VERSION     XM_071832281.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1141
                     /gene="LOC139842107"
                     /note="uncharacterized LOC139842107; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842107"
     CDS             1..870
                     /gene="LOC139842107"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688382.1"
                     /db_xref="GeneID:139842107"
                     /translation="MEDLGSSSTTSSTSQTFSTNSFFTPLLISIMGIGATGLSILFYH
                     LLLVRYCMRRHAARMAALHNLNGEEIQSGVDEKTLLTIPIITYKKSDYDESECAVCLG
                     DVENGDNVRLLPNCKHLFHVKCIDEWFVGHTSCPVCRVPVVSPDDEIRGCPVCRSVGA
                     VVDDRTSVGSDEFTSESTDSTVSVDVGANDGPIRPTLSSRSPRIMLRHCHSLSLPREK
                     MGRFVGMELKRSLSMGQSTNVIIDINIDNVDKDCKYYSSFKDQSIRQFQRVKESLSRI
                     CVGQGQGNGILPY"
     misc_feature    <241..597
                     /gene="LOC139842107"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: HRD1; COG5243"
                     /db_xref="CDD:227568"
     misc_feature    286..417
                     /gene="LOC139842107"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins; Region:
                     RING-H2_EL5-like; cd16461"
                     /db_xref="CDD:438124"
     misc_feature    370..387
                     /gene="LOC139842107"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
ORIGIN      
        1 atggaagatt taggatcatc atcaacaaca tcatcaacct cacaaacttt ttccacaaat
       61 tcctttttta cacctttact tatttccatt atgggaattg gtgcaactgg tttatctata
      121 cttttttacc atcttttact tgttagatat tgtatgagaa gacatgcagc aagaatggca
      181 gcattacata atcttaatgg tgaagaaata caatctggcg ttgatgaaaa aaccctttta
      241 acaattccaa taattacata taaaaaaagt gattatgatg aatccgaatg tgcggtttgt
      301 ttaggtgatg ttgaaaatgg tgataatgtg aggttgttgc caaattgtaa acatttgttt
      361 catgttaaat gtattgatga atggtttgtg ggacacacga gttgtccggt ttgtcgggtt
      421 ccggttgttt caccggatga cgagattcgc ggttgtccgg tttgtagatc ggttggggca
      481 gttgttgatg accgtacgtc tgttggctct gatgaattta catcggaatc aacggatagt
      541 acggtcagtg ttgatgtggg tgctaatgat gggcccatta ggcccacatt atcgtccagg
      601 tcaccacgaa taatgcttag gcattgtcat tcattgtctt tgcctaggga aaagatggga
      661 aggtttgttg gaatggaatt aaaaagatct ttgtcaatgg ggcaaagtac taatgtgatt
      721 attgatatta atattgataa tgtggataaa gattgcaagt attattcgtc gtttaaagat
      781 caatcgatta gacagtttca acgtgtgaag gaatcgctta gtcgaatttg tgtaggacaa
      841 ggtcaaggaa atggcattct tccatattga gaattgagat gtattgattt gtgattcttg
      901 gatcattggt ctagcggtat tgcactacaa ttttggggtt ccgagttcga gtttaagcga
      961 gttcaagtca ggggtggaca atataatatg tatataatca tgaaagagtg tgtgttaaag
     1021 tgtgtgactt gcctttcaag aaaatttatt tgcgcttctt aaattctatt tagttattag
     1081 gggcacaaga tatgctgttg ttcatgctat gtgagagatt gcttattgta aacaaacttg
     1141 a
//
LOCUS       XM_071832282             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842108), mRNA.
ACCESSION   XM_071832282
VERSION     XM_071832282.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139842108"
                     /note="uncharacterized LOC139842108; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842108"
     CDS             1..498
                     /gene="LOC139842108"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688383.1"
                     /db_xref="GeneID:139842108"
                     /translation="MGTGFCNRTSEAFNNFIEEGNLVDIPLGGRAYTRANKSFTKRAK
                     LDRFLASNGFLNSFPNLVGSILTNLWSDHCPILLRNEVIDYGPTPFKLFKSWFDLDGF
                     ENTVISCWNNTETYLSSNPQIRFKDKLKRVKGALKEWNISLRSQAMSDRISHVNQIKG
                     IDDEL"
     misc_feature    <10..237
                     /gene="LOC139842108"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgggtactg gattttgtaa tcggacatct gaggctttta ataattttat tgaagagggg
       61 aatcttgtgg atattcctct tggtggaaga gcgtacactc gagctaacaa gtcgtttact
      121 aagagagcaa aactggaccg atttcttgct tctaatgggt tcttaaattc tttcccaaat
      181 ttggttggtt ctatcctcac taacctttgg tcggatcatt gtcctattct ccttcgcaat
      241 gaggtaatcg attatggccc cactcctttt aaactattca aaagttggtt cgatttagat
      301 ggctttgaga acactgttat cagttgctgg aataacaccg agacatatct cagctcaaat
      361 cctcaaatac gttttaaaga caaactaaaa cgggttaagg gtgccttgaa agagtggaat
      421 atttccctga gatcacaggc tatgtctgat cgaatctccc acgttaatca gataaaaggt
      481 attgacgacg agctgtag
//
LOCUS       XM_071832283             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842109), mRNA.
ACCESSION   XM_071832283
VERSION     XM_071832283.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139842109"
                     /note="uncharacterized LOC139842109; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842109"
     CDS             1..627
                     /gene="LOC139842109"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688384.1"
                     /db_xref="GeneID:139842109"
                     /translation="MCLDNFCLCVTDLYQQEYLRKPTARDIQRIYERHETKHGSNNDI
                     NVLNRSPLFDSLKNGSAPPSPFIVNGHDYTHGYYLADGTYPDWATLIKAYQSPTDEPS
                     TKFTRFQESARKDVERTFGVLQGRFSILRVARRAWRAKKLHRILYCCVLLHNMIHEDN
                     GFAITSLDEEYLNEPENRPTFVRNRNTTRAALEKEIRDKDVHNALRVD"
     misc_feature    <115..483
                     /gene="LOC139842109"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtgtttag acaacttttg tttgtgtgtt actgatttgt accaacaaga atatctacgt
       61 aaaccaactg cacgtgatat tcaacgaata tacgaaaggc acgaaacaaa gcatggttcc
      121 aacaatgaca tcaatgtatt aaaccgttca ccgttgtttg attctcttaa gaacggttcc
      181 gctccacctt caccatttat agtaaatggt catgactaca cacatggtta ttatctcgcc
      241 gacggtactt atccggattg ggctacactt atcaaagcat accaatcccc aaccgacgag
      301 ccatcaacaa agtttacacg ttttcaagaa agtgcacgaa aagatgtcga gcgaacattt
      361 ggtgtccttc aaggaagatt cagtatatta cgtgtggcta gacgagcttg gagagcaaaa
      421 aaattgcacc gcatattata ttgttgtgtt ctattgcaca atatgatcca cgaggataat
      481 ggttttgcta taacgtcact cgacgaagag tatctaaacg agccagaaaa ccgacccact
      541 tttgttagga atcgaaatac tactcgagct gcattagaaa aggaaattcg cgacaaagat
      601 gttcataatg cacttcgtgt ggactaa
//
LOCUS       XM_071832284             744 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842110), mRNA.
ACCESSION   XM_071832284
VERSION     XM_071832284.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..744
                     /gene="LOC139842110"
                     /note="uncharacterized LOC139842110; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842110"
     CDS             1..744
                     /gene="LOC139842110"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688385.1"
                     /db_xref="GeneID:139842110"
                     /translation="MSKQNFNLESLFERQLGDGHDLLFWEDLWIGETQLKFLFPRLFR
                     LETVKDVSIMDRVEFSNNAWSYTWCWVRNLIGRLHGELIQLKALTKSEAKLGNGKCTW
                     KCKTSGKNEYNSKIVTEKINELMTQSDNSNNATLRNSLLPQKIEIFIWRTKRKRIPTR
                     VELDKMGVDLDTMLCPMCNDTIETVDHAILECKFAKEIWEGIFKWRGTNAPSNLNIES
                     TFKGIEIGGLSGQGKKVWQAIEWMTGYFI"
     misc_feature    <412..594
                     /gene="LOC139842110"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagtaaac agaacttcaa tttggaatca ctattcgaaa gacagcttgg tgatggtcat
       61 gacttgcttt tttgggaaga cttgtggatt ggtgaaacac aattaaaatt cctttttcct
      121 cgtttgttta gattggaaac tgtgaaggat gtttcaataa tggatagggt ggaattctcg
      181 aataacgcat ggtcttatac ttggtgctgg gtgaggaatt taataggtag attacatggc
      241 gagttaatcc aactaaaggc gctgactaaa tctgaagcaa agctaggtaa tgggaagtgt
      301 acatggaagt gcaaaacaag cgggaaaaat gaatacaact caaagattgt tactgaaaaa
      361 atcaatgagt taatgacaca aagtgacaac tcaaacaatg caaccctacg gaacagtctt
      421 cttccccaaa agattgagat tttcatttgg agaactaaaa gaaagaggat accgacaaga
      481 gtagagctag acaaaatggg cgtagatctc gatacaatgc tatgtccaat gtgtaatgat
      541 acaattgaga cggtggatca tgctattttg gagtgcaaat ttgcaaaaga gatttgggaa
      601 ggtattttca aatggcgggg aacaaatgca ccctcaaact taaacattga atcaacattc
      661 aagggcatcg aaattggtgg actctcggga caggggaaaa aagtgtggca agctattgag
      721 tggatgacgg gttattttat ttga
//
LOCUS       XM_071832285             945 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 11-like (LOC139842111), mRNA.
ACCESSION   XM_071832285
VERSION     XM_071832285.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..945
                     /gene="LOC139842111"
                     /note="protein FAR1-RELATED SEQUENCE 11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842111"
     CDS             1..945
                     /gene="LOC139842111"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 11-like"
                     /protein_id="XP_071688386.1"
                     /db_xref="GeneID:139842111"
                     /translation="MCWFTSVLRSEYCNWCSYFYTLYKLDTVEEFEQQWPLVTTKYNL
                     TNNKHVSGLYEIKTFWVPAYLREFFFGGMTTTGRSESINAFVKRFISSRTSLTQFIRQ
                     VDLAIEDVEQKQLHDTMLEKYRGSNLRSVSQLEEQAHHFFTPFAFKKFQEQFGNAIQY
                     LVPENDATSLLLNITKQHVVTLSFGMIPSIYLHPRWSRNDIENDGSCSSHQLSSLEDS
                     DSYKDGELVFDEIDLVQCPIKSKTKGRPQQKWKKSGKELTKQARRCGRCKCFGHNITT
                     CKETTNIQLENNSSEVSTKRKKIDSGNEELNPILSTKC"
     misc_feature    <64..>453
                     /gene="LOC139842111"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgtgttggt ttacgtcggt gttaagaagt gagtattgta attggtgttc atacttctac
       61 accttatata agttggatac agttgaagaa tttgagcaac agtggccact tgtaactaca
      121 aaatacaatc tcaccaataa taagcatgtt tcaggtttat atgagattaa aactttttgg
      181 gtgccggctt atcttaggga atttttcttt ggcggcatga caactaccgg aagatcagaa
      241 agtatcaatg catttgtaaa aagatttatt tcttctcgta cttccttaac acagtttatt
      301 agacaagttg atcttgcaat tgaagacgta gagcaaaaac aattacatga taccatgttg
      361 gagaagtata gggggtcaaa tttgcgatcg gtttcacaat tagaagaaca agctcatcac
      421 ttctttactc cattcgcatt taagaaattt caagagcagt ttggtaatgc aattcaatat
      481 ttggtccctg aaaatgatgc aacaagttta ttgttaaaca tcacaaagca acacgttgtc
      541 acactgtctt ttgggatgat cccttctatc tatttgcatc cacgatggag ccgaaacgat
      601 atagaaaatg atggttcatg ttcatcgcat caactatcaa gtcttgagga ttcagactct
      661 tataaagatg gtgagcttgt atttgatgaa attgatttag ttcagtgccc tatcaaatct
      721 aaaactaaag gtcgaccaca acaaaaatgg aagaaaagtg gaaaagagtt gacaaaacaa
      781 gcaaggcgtt gtggacgatg caagtgtttt ggtcacaata ttaccacttg caaagaaaca
      841 acaaatattc agttggaaaa caattcctca gaggtatcta ctaaaagaaa gaaaatcgat
      901 tcaggaaatg aagaactaaa tcctatttta tctaccaaat gttaa
//
LOCUS       XM_071832286            1332 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139842112), mRNA.
ACCESSION   XM_071832286
VERSION     XM_071832286.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1332
                     /gene="LOC139842112"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139842112"
     CDS             1..1332
                     /gene="LOC139842112"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071688387.1"
                     /db_xref="GeneID:139842112"
                     /translation="MDLSSIADSNSIAQSDVHVVTNSSNESAADSVADTFSSTNSVCR
                     NHFLSSYEDEGPDGKKLWFPNVPDHFNPVIGSVLRSWEDCLYFYDLYAEAAGFNIKKA
                     SENKDEDGSVFYQVYRCNRSGHPVPKPLVPPAIVHPPANVNASQSSPDPDSSIPDKPA
                     KRKHQRRKVSNCKSSSIKVECEACIRFKLIKGKIVIFKFFEGHSHKLITERNRNLLNK
                     RRKLDPEHMEFLFKLSTRSNMGGFKAHTLFSALSGGIDNVGPLPVDFNNFHRDLIQSL
                     GDTDAHIAIEQLLMKKNTLPNFSVEYYCDHNDFLRGVFWADNIFKFGDIVGFDATYGT
                     NMYNMVFVPLTGVDNHKKLVIFGAALLASESIESFSWFLDCFLKVFGTEPGLVSTDQD
                     PAMLEVGRELFSNKDFRKQMNNIFWNQELNAEKFEKCWQHVLDEFGLHDVD"
     misc_feature    214..>1323
                     /gene="LOC139842112"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggatttat cttcaatcgc agattcaaat tcaattgctc aatctgatgt tcatgttgtt
       61 acaaattcgt ctaatgaatc agctgctgat tctgttgctg atacattttc tagcaccaac
      121 tctgtctgta gaaatcattt tttatcttct tatgaggatg aaggtcctga tggaaagaaa
      181 ttgtggtttc ctaatgttcc agatcatttt aatcctgtta tcggttctgt attaagatca
      241 tgggaagatt gtttatattt ttatgactta tatgctgagg ctgctgggtt caatattaag
      301 aaagcttctg aaaataaaga tgaagatggt tcagtttttt accaagttta taggtgtaat
      361 aggtcaggtc atcctgtccc aaaacctctt gttccccctg ctattgttca tccacctgct
      421 aatgtcaatg catctcaatc tagccctgat cctgattctt ccattcctga taaacctgca
      481 aagcgaaagc atcagcgtag gaaagtgtct aactgtaaat cttctagtat taaggttgaa
      541 tgtgaagctt gcattagatt caaacttatt aagggtaaga ttgttatttt taagtttttt
      601 gaggggcata gtcacaaact cataactgag aggaatagga atttgttgaa taaaaggagg
      661 aagttggatc ctgaacacat ggaatttctt ttcaaactca gtactcgatc aaatatgggt
      721 ggatttaaag ctcacacact ttttagtgct cttagtggtg gtattgataa tgttggtcct
      781 ttgcctgtag atttcaataa ttttcatcgt gatttgatcc aatctctagg tgatactgat
      841 gcacatattg ctattgaaca actgcttatg aagaaaaata ctttacctaa cttcagtgtc
      901 gagtattatt gtgatcataa tgatttttta cgtggggttt tttgggctga caatattttt
      961 aagtttggtg atatcgttgg ctttgatgct acatatggta caaatatgta taatatggtt
     1021 tttgtacctc tcactggagt tgataatcat aagaagcttg ttatttttgg agctgcttta
     1081 ttagctagtg aaagcataga atcatttagt tggtttcttg attgttttct caaagttttt
     1141 gggactgaac cgggcttagt gtccactgat caagacccag caatgttgga ggttggtcgt
     1201 gagttgtttt caaataaaga ttttcgtaag caaatgaata acatattctg gaatcaagag
     1261 ttgaatgctg aaaagtttga aaagtgttgg caacatgttt tagatgaatt tggcttgcat
     1321 gatgtcgatt ag
//
LOCUS       XM_071832287            1155 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842113), mRNA.
ACCESSION   XM_071832287
VERSION     XM_071832287.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139842113"
                     /note="uncharacterized LOC139842113; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842113"
     CDS             1..1155
                     /gene="LOC139842113"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688388.1"
                     /db_xref="GeneID:139842113"
                     /translation="MAGLMRTSALCESEKSFFIKCKNKHSKLVEFFSRFDVVVEKQRH
                     NNMVLEFEMDNRSINCVTNKLIELHARDFYTPTMFLLVQEEIFQSSFSCVQISSTIEE
                     NEDKQLGVIEEKFPPPHLNWKYRVTFDVKTAEASCSCLLFTREGRLCRHIFYVYHVHD
                     VVAIPMVHLLRRWSKEVSETFNSIFVYSNDKSESKKIINHVFNKLRKVSSLYRDDLDK
                     LVSFRDKFDVLIGDFLGSTSDEPSTSTRGEHINRLWGFSKPVNSNIRAPENIRNKGQR
                     RSNRILSSKEVAVKKHVKPRACKRCGILGHNVRTCTTDLTQLHNSKNKGKNVIDCGIH
                     DHNVRTRTTDLTQLHNSKNKGKNVIDFELEDESEEDDEDVAYEDEDSDSD"
     misc_feature    <1..>528
                     /gene="LOC139842113"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggctggat tgatgagaac gtcagcactt tgtgagagtg aaaaatcatt ctttataaaa
       61 tgcaagaaca agcattctaa attggtggag tttttttcac gtttcgatgt tgtagttgaa
      121 aagcagcgcc ataacaacat ggttctcgag tttgaaatgg ataatagatc tattaattgt
      181 gttaccaata agctaattga gttgcatgct agggattttt atacaccaac catgtttctg
      241 ttggttcaag aagaaatatt tcagtcttct ttctcttgtg tgcaaatcag ctcaaccatt
      301 gaagagaatg aagataaaca attaggtgta attgaagaga aatttcctcc tcctcatcta
      361 aactggaaat atagggttac ttttgatgtt aaaactgccg aagccagctg ttcgtgtttg
      421 ctttttacac gtgaaggtcg tttatgtagg cacatatttt atgtatatca tgttcatgat
      481 gttgttgcta tccctatggt tcatttgttg aggaggtggt caaaggaggt atctgaaaca
      541 tttaattcca ttttcgtcta ttctaatgat aagtctgaat ccaaaaagat tatcaatcat
      601 gttttcaaca agcttaggaa ggtttcctct ttatatcgag atgatctaga taaacttgtt
      661 agttttagag ataagtttga tgtcttaatt ggcgattttc ttggttctac ttctgatgag
      721 ccttctacat ctactagagg tgaacatatt aatagactat ggggattctc taaaccagtc
      781 aattcaaata ttcgtgctcc ggagaatatt agaaacaaag gtcaacgtag atcaaatcgg
      841 atattgtctt ccaaagaagt ggctgttaag aaacatgtta agcccagagc ttgcaagcgt
      901 tgtggtattc ttggtcacaa tgttcggact tgtactactg acctcactca actacataat
      961 tcaaagaata aaggaaaaaa tgtcattgac tgtggtattc atgatcacaa tgttcggact
     1021 cgtactactg acctcactca actacataat tcaaagaata aaggaaaaaa tgtcattgac
     1081 tttgaattag aagacgaaag tgaggaagat gatgaagacg ttgcatatga agatgaagat
     1141 tctgattctg attaa
//
LOCUS       XM_071832288            2151 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides leucine-rich repeat
            receptor-like protein kinase PXC1 (LOC139842114), mRNA.
ACCESSION   XM_071832288
VERSION     XM_071832288.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2151
                     /gene="LOC139842114"
                     /note="leucine-rich repeat receptor-like protein kinase
                     PXC1; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 14 Proteins"
                     /db_xref="GeneID:139842114"
     CDS             1..1977
                     /gene="LOC139842114"
                     /codon_start=1
                     /product="leucine-rich repeat receptor-like protein kinase
                     PXC1"
                     /protein_id="XP_071688389.1"
                     /db_xref="GeneID:139842114"
                     /translation="MSTFHPFLLILLLLLLLLPPSLSAVDIDSDTAALSLFRSQTDTH
                     DILLSNWTLSSITHSTACSFQGIKCTNNRVTSISLPSLNLRGPLDSLASLDQLRFLDL
                     RNNRLNGTILPIINCTNLKHVYLSGNDLSGSIPVEISHLNRLLRIDLSDNNLIGPVPE
                     SISSLNRLITLKLENNELFGEIPDVLGKIEQLKQVNFSNNEFSGYLPENIVRKFGDDS
                     FSGNKGLCGSSPLQTCSAIKPPETVQSNPSSLPTTTNIDVAKSHKRLHPGVIAAIVIA
                     NSVLLLVILSFLVAFYCGKRSSSTSSKIGSEIGKSRSSYASETRVYANNGDGDSENNK
                     LVFYDKKKKFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVVAVKRLKDANPCGRKE
                     FEQYMDVIGKLKHMNVVKFRAYYYAKEEKLLVYDYLPNGSLHLLLHGNRGPGRIPLDW
                     TTRISIVLGAARGLACIHEVYKAARIPHGNIRSSNVLLDKNGNACISDFGLSLLLNPV
                     HATVRLGGYKAPEQFETKRLSQKADVYSFGILLLEMLTGRAPSEYPSPSRVSIEEEEQ
                     SIDLPKWVRSVVRDEWTAEVFDQELLRYKNIEEELVSMLHVAMTCVAAQPEKRPTMAE
                     VVKMIEDIRVEQSPLGEDYDESRNSISPSVGTTD"
     misc_feature    79..210
                     /gene="LOC139842114"
                     /note="Leucine rich repeat N-terminal domain; Region:
                     LRRNT_2; pfam08263"
                     /db_xref="CDD:462411"
     misc_feature    <229..1890
                     /gene="LOC139842114"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    289..357
                     /gene="LOC139842114"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    358..429
                     /gene="LOC139842114"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    430..501
                     /gene="LOC139842114"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    502..573
                     /gene="LOC139842114"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1069..1896
                     /gene="LOC139842114"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1069..1080,1087..1089,1093..1095,1132..1134,
                     1138..1140,1225..1227,1273..1284,1438..1440,1450..1455,
                     1459..1461,1489..1494)
                     /gene="LOC139842114"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgtcaacat tccatccctt tctcctcatt ctcctcctcc tcctcctcct ccttccaccg
       61 tcactttcag ccgtcgacat cgactccgac accgccgcgt tatccctctt ccgatcccaa
      121 accgacacac acgacatcct tctttcaaac tggactctat cttcaatcac tcactcaacc
      181 gcttgttcat ttcaaggtat aaaatgcaca aacaatcgag tcacttccat ttccctccct
      241 tccttaaacc tccggggccc actcgactcc ctcgcctccc tcgatcagct ccgtttcctc
      301 gatctccgca ataaccgctt aaacggcaca attttaccga tcataaactg caccaatctc
      361 aaacacgtgt acctttccgg taacgaccta tccggatcga ttccggtaga aatatcgcac
      421 ttaaaccgat tgttacgtat cgatttatcc gataacaatt taatcggacc ggttcctgaa
      481 tcgatctcga gtttaaatcg tttaattacg cttaaactcg agaacaacga attattcggt
      541 gaaattccgg atgttttagg taaaattgag caacttaaac aagtgaattt ttcgaataat
      601 gagttttccg gttacttacc ggaaaacatc gttcgaaaat tcggagatga tagtttttcc
      661 ggtaataaag gactttgcgg atcgagtcct ttacagactt gttccgcaat taaacctcct
      721 gaaacagtac aatcaaaccc tagctcattg cctactacaa caaatattga cgtagcaaaa
      781 tctcataaac gattacatcc aggtgtaatt gcagctattg tgattgctaa ttccgtatta
      841 ttacttgtaa ttctgtcgtt tctggttgcg ttttattgcg gaaagcgatc tagtagtacg
      901 agctcgaaaa taggttcgga gatcggaaag agtaggagca gttacgcgag cgaaactagg
      961 gtttacgcga ataatggaga tggtgatagt gagaataata aacttgtgtt ttatgataag
     1021 aagaagaagt ttgaacttga ggatttgttg cgagcatcgg cggagatgct tgggaaaggg
     1081 agtttgggga cggtttatag ggcggtgttg gacgatggtt gtacggtggt ggcggttaag
     1141 cggttaaagg atgctaatcc ttgtggtaga aaggagtttg aacaatatat ggatgtgatt
     1201 gggaagctta agcatatgaa tgttgtcaag tttagagctt attattatgc taaggaagaa
     1261 aagcttcttg tttatgatta tttgcctaat ggaagcttgc atttactcct tcatggaaac
     1321 agaggaccgg gtcgaatccc gttagattgg acgacaagga tcagcatagt gttaggcgca
     1381 gcgcgagggc tagcttgtat ccatgaagta tacaaagctg caagaatacc tcacggaaac
     1441 attaggtcat caaatgtgtt actagacaaa aatggaaatg cttgcatttc tgattttggg
     1501 ttatcgttgc tattgaaccc ggttcacgcc actgttagac taggagggta caaagcaccc
     1561 gagcaatttg aaaccaaaag actatctcaa aaagcagatg tttacagttt cgggattttg
     1621 ctattggaaa tgttaacggg tcgagctcca tctgaatacc cttcaccgtc tcgtgtaagt
     1681 attgaggaag aagaacaatc tatagattta cctaaatggg ttcggtcggt tgtgagggac
     1741 gagtggacag ccgaagtgtt tgatcaagaa cttttaaggt acaaaaatat cgaagaggaa
     1801 ctcgtttcga tgcttcatgt tgcaatgact tgtgttgcag cacaacccga aaaaaggcct
     1861 acaatggcgg aagttgtgaa aatgattgaa gatatacggg ttgaacagtc tccgttaggg
     1921 gaagattatg acgagtcccg taattcaatt tcgccatcgg ttggtacaac cgattgatct
     1981 aaagatggtt cttccatcta taaggttatc aagcttttag ttacatgccc ttatttatgc
     2041 ttttttgtaa catttgttat gtgttttgtg attattagta tttgaagtta gcttgtgata
     2101 tggtaatgtg taatgtaatg gtaaagttgg aaattaattt gattatttgt c
//
LOCUS       XM_071832289             756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842115), mRNA.
ACCESSION   XM_071832289
VERSION     XM_071832289.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..756
                     /gene="LOC139842115"
                     /note="uncharacterized LOC139842115; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842115"
     CDS             1..756
                     /gene="LOC139842115"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688390.1"
                     /db_xref="GeneID:139842115"
                     /translation="MAKWDIPVACHAFSYMLKGDARVWFDSLPRDSVASFDDLKRQFR
                     SKFSQQKRHKKNHVAAHGIKQKDSEGSRAFLARYTNETQQIPNLPESQRISGLLYGSR
                     VRPLIEHLSRDLPSTYEALLEKAYIWLDAKETAGNFVLDDTPINRRKETSERRDDKHV
                     RKEDRGRFHPYRRETGAGILGALIKTPKEILATEKATNKFKTPGKMSNRGRNRDMTKF
                     CDFHNDFGHDTDECFNLKKPLRRLLSRANCPIS"
     misc_feature    37..273
                     /gene="LOC139842115"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
ORIGIN      
        1 atggccaaat gggacatacc cgtagcatgt catgcattct cttacatgtt aaaaggagat
       61 gctagggttt ggtttgattc cctaccaaga gactccgtag ctagcttcga cgacctaaaa
      121 cggcaattta ggtctaagtt tagtcagcaa aagcgacaca agaagaatca tgtggccgct
      181 catgggataa agcaaaagga tagtgaaggt tctagagcct ttctcgctag atataccaac
      241 gaaacacagc aaattcccaa cctaccagaa tcccaaagaa tatctgggtt actctacgga
      301 tctagggtca ggcctctcat tgaacatctt agccgagacc taccaagcac ttacgaagct
      361 ttgttagaaa aggcatatat atggttagat gctaaggaaa cagctggtaa cttcgtccta
      421 gacgacaccc ccataaatag gcgaaaagag acgtcagaaa gaagggacga taaacatgtt
      481 agaaaagagg atagggggag gttccatcct taccgaaggg aaaccggagc tgggatcttg
      541 ggggcattaa taaaaactcc caaggaaatc ctagcaactg agaaagccac aaacaagttc
      601 aaaaccccgg gaaagatgtc caacagagga agaaataggg atatgaccaa gttttgtgac
      661 ttccacaacg attttgggca cgatactgat gaatgtttca acctcaaaaa gccattgagg
      721 aggctgttaa gtcgggcaaa ctgtcccatc tcataa
//
LOCUS       XM_071832290             924 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842116), mRNA.
ACCESSION   XM_071832290
VERSION     XM_071832290.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..924
                     /gene="LOC139842116"
                     /note="uncharacterized LOC139842116; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842116"
     CDS             1..924
                     /gene="LOC139842116"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688391.1"
                     /db_xref="GeneID:139842116"
                     /translation="MFNREVRRIYLDSGSACDVMYEHCFERLSPTIRARLGAPRVPLV
                     GFSGERCWPIGEIDLDFTIGEPPLARTETIDFVVVRANSPHNILLGRVAMKKMGIIVS
                     TVHQMVKFHTHEGIGTLASTYDRNKVIFAIKETMKEPTECVPGASEEDPQVEKISVNP
                     MFQDQQISIGKNLPASTKQKLRKLLQANVDVFAWENSDMTGIPRTINVQGSSFVTEHR
                     LNEHKHLEPVHQKKRNLAPERDEAVCKEVEGLLKAGIIREAKYPSWVASPVMVKKSDG
                     GWRMCVDFTNINKACPKDCNPYPKSIGKSNP"
     misc_feature    31..273
                     /gene="LOC139842116"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(34..36,40..42,46..48,127..135,262..264)
                     /gene="LOC139842116"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    34..42
                     /gene="LOC139842116"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    34..36
                     /gene="LOC139842116"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(127..138,148..159)
                     /gene="LOC139842116"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    760..>897
                     /gene="LOC139842116"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgttcaaca gagaggtacg aaggatatac ctcgacagtg gaagtgcttg tgatgtgatg
       61 tacgaacatt gcttcgaacg gctaagtccc accatcagag cacggttagg tgccccaaga
      121 gtacccttag ttggattctc cggagaaagg tgttggccca tcggagaaat tgatctcgac
      181 ttcacaatag gggaaccacc attagcaaga acagaaacca ttgatttcgt ggtagtccga
      241 gcaaactccc cacataacat cctgctcggg agggtagcta tgaaaaagat gggtataatt
      301 gtatccacgg ttcatcaaat ggtcaaattc cacacccatg aggggatcgg caccctcgcg
      361 tcaacgtatg acaggaataa ggtaatcttc gccataaaag aaacaatgaa agagccaacc
      421 gagtgtgtcc caggagcttc ggaggaggat ccacaagtag aaaagatatc agtaaacccg
      481 atgtttcagg atcagcagat cagcatagga aaaaacttgc cagcatccac caagcaaaag
      541 ctccgaaagt tacttcaagc caatgtggat gtatttgctt gggaaaatag cgatatgacc
      601 gggataccac gaactatcaa tgtacaaggg tcgtccttcg taacggagca tagactcaac
      661 gagcacaaac acctcgaacc agtgcatcag aaaaaacgaa acttggcacc ggaaagggac
      721 gaagcggtct gtaaagaagt agaaggcctg ttaaaagcgg gaataattcg cgaagcaaaa
      781 tacccctcgt gggtcgctag tcccgtgatg gtgaagaaat cagatggagg atggagaatg
      841 tgcgtcgact ttaccaacat caacaaagcc tgtcccaaag attgtaaccc ctacccgaaa
      901 tcgattggaa agtcgaatcc ctaa
//
LOCUS       XM_071832291            1527 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            3-deoxy-D-manno-octulosonic acid transferase, mitochondrial
            (LOC139842118), mRNA.
ACCESSION   XM_071832291
VERSION     XM_071832291.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1527
                     /gene="LOC139842118"
                     /note="probable 3-deoxy-D-manno-octulosonic acid
                     transferase, mitochondrial; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842118"
     CDS             187..1527
                     /gene="LOC139842118"
                     /codon_start=1
                     /product="probable 3-deoxy-D-manno-octulosonic acid
                     transferase, mitochondrial"
                     /protein_id="XP_071688392.1"
                     /db_xref="GeneID:139842118"
                     /translation="MRSNKGGETIYMLYKAITSTLTPLINLQLRYRKFRHLEHPLRWP
                     ERLGQPSVPRPSGALIWFHAVSLGEGMCVVPVIKRCVERNPDVTVLMTTTTTSAFEVL
                     KTLLPCSVIYQFAPVDTPAAVNAFLEYWKPYALVLVESELWPNLVFSASKHGVILTLI
                     NARMSIKSFNNWSRPVVRQLASLMLSKFSLILPLSNIQAIRFQLLQASPFVINFSGNL
                     KLCTGELVNITKNMTNMEDFHEKIADRSVWMASSIHKGEEEVILAVHRALMQKHPNIL
                     CIIVPRHPNLGQQISHGLQKIGVNVALRSRGDSLTSETSIYIVDTLGELRQFYRLTPI
                     AVIGGSLLPGLTGHNLAEAAAAGCAVLTGQHIGHFSHMVNAMQRLNPLSVTHVGGDTE
                     LEEILDKLLNDPKILKAHRMAAKHAIQTLSTGVIDNVCTLLQLHIFRKVHAGAI"
     misc_feature    214..1443
                     /gene="LOC139842118"
                     /note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
                     wall/membrane/envelope biogenesis]; Region: KdtA; COG1519"
                     /db_xref="CDD:441128"
ORIGIN      
        1 acagtagcaa cacccttgga gtttagattc tcaaactcaa caaaacttga aacactcgtt
       61 acacttggga gcccacaaac acttgctaat gtttcatttg atctgaatca tagtcataac
      121 ataaattgaa catcaaatca gtcaattaag ctagtcattc aagtcgctga cgaaatcgaa
      181 acaaaaatga ggtcaaataa aggcggtgaa acaatttaca tgctatacaa agctattaca
      241 tccactctaa caccattaat caatcttcaa ctccggtatc gcaaattccg tcatctcgag
      301 catcctctcc ggtggccgga gcgtctcggc caaccgtctg tccctcgtcc ttccggcgct
      361 ctcatctggt tccatgccgt ttccctaggt gaaggaatgt gtgttgtgcc tgtgattaaa
      421 cgatgcgttg aacgaaatcc ggatgttaca gttttaatga ctaccactac aacatctgca
      481 tttgaagtgc taaagacttt acttccatgc agtgtcatat accagtttgc tccagttgat
      541 acacctgctg ctgtgaatgc ttttcttgaa tattggaagc cttatgctct ggtgcttgtg
      601 gagagtgaac tatggcctaa tcttgttttt agtgcctcaa aacatggtgt tatactaacg
      661 ttaataaatg ctcgaatgtc aataaagtcc ttcaacaatt ggtcaagacc agtagtacga
      721 caacttgctt cattgatgct gtccaaattt tctttgatac ttccattgag caatattcag
      781 gcaattcgtt ttcagctgct gcaagcttca ccatttgtta ttaacttctc cggtaactta
      841 aagctttgta ctggagagtt ggtcaatata actaaaaaca tgacaaatat ggaagacttt
      901 catgaaaaga ttgcagacag aagtgtttgg atggcttcat caatacataa gggtgaagaa
      961 gaagtgatcc ttgcagttca cagagcctta atgcagaagc acccgaatat cctttgtatc
     1021 attgttcctc gtcatccaaa tctcgggcag caaatctctc atggcttgca gaaaattggg
     1081 gtgaatgtgg cgttgagatc acgtggtgac tcacttacat ctgaaacaag tatatacatt
     1141 gtggatactt taggtgaact gagacaattt tatagattga ctcctatcgc cgttattgga
     1201 ggttctttgt tgcctggttt aactggccat aatcttgctg aggctgctgc tgcaggatgt
     1261 gctgttttga ctggtcaaca tattggtcat ttctcacata tggtcaatgc aatgcaacgg
     1321 ttaaatcctt tatctgtaac acatgtaggt ggagatacgg aactagaaga aattctggac
     1381 aagctcctaa atgatcctaa aatcctaaaa gcacaccgta tggctgcaaa acatgcaatt
     1441 cagacactgt caactggtgt tattgataat gtctgcaccc tgttgcaact tcatattttc
     1501 cgaaaagttc atgcaggagc aatttga
//
LOCUS       XM_071832293            4869 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842119), mRNA.
ACCESSION   XM_071832293
VERSION     XM_071832293.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4869
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4869
                     /gene="LOC139842119"
                     /note="uncharacterized LOC139842119; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139842119"
     CDS             1..4869
                     /gene="LOC139842119"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688394.1"
                     /db_xref="GeneID:139842119"
                     /translation="MDVSTPNHARKRSPEDTNQLTHANTKRARKIRKEIMLAKRRKKE
                     IHTSQISYSVNAYPQENTVIARRVTQDIFYKKREKQNNYIPNTKKDQQNFTASKRKTQ
                     CSKSIRSASVSTTSNDLAVVSSFNKFHVSEDLRSKSHTSYTHNIPETSTTSTQLTQTL
                     QQTVNTSDNPRGVHSKNARSARMEILRQRRKGKTLAQEKIVGISKEYYDEGDLSHTCS
                     ACGAILWYRETRRGKNTKGLPGAFSLCCLKGKIALPEFTKNPPKLLLDLYTNNHPKSK
                     HFIENVRQYNMIFSFTSMGGKIDINVNKTKGPYTYRIHGQNIHKMGGLIPTFGTTPKY
                     SQLYIYDTTNEAANRKKAIGGKNCNQPTSSKNTLDESLITELMQLLDECNPLVKMYRI
                     ARDRFEKNPNKKFKIKLIGRRSTDGRNYNLPTIDEVAALIVGDIDLNFDKRDIIIDSH
                     VDGLQRISELHPQYLALQYPLLFAYAEDGYRTDIYHRDVDAITTKKRKRVTMREFFAY
                     KIQERAIPTLVHLARKLHQQLLVDAYTMVESERISYIRNNQKILRSDTFSHLTEASLT
                     GSAVNTMLGKRIKLPSSFTGSARYMIENYRDAMALCRVYGYPDLFLTFTCNSKWPEIT
                     RALEGSNFNPEDKPAYQARMFKIKLDRLMSDIKKRKIFGRVRAELYTVEFQKRGLPHA
                     HICIFLDERDKMSEPEDIDKYICAEIPDKNEDPELYQLVSDLMIHGPCGEKNPKCPCT
                     DIEKKCTKRFPKPFSDVTSVDKDGYPVYRRRDDGRTVKKQGHDLDNRNVVPYNPQLLK
                     KFQAHLNVEWCNQVGAIRYLFKYINKGNDRVTAGVCDEDTDEIKEYYDCRYVSSCEAV
                     WRILSFDINHRNPTVIRLPFHLEDQHSIVFDEEDFIENVLDNPSVNTSMFLEWMKCNQ
                     INEEARQLTYVEFPTKFVWNKQTRVWTLRKKFTGSIGRIHHVSPSAGDLFYLRILLNK
                     VKGPTSYQDIRTVDGKVCSTFKDACYEMGLLDDDQEYIDGIKEASAWDSGNFVRSLFA
                     QLLASNSLSRPEVIFENSFQYLSVDIIHHRLSGIEPTREMVRNLTLHEIEKILQRNGS
                     TLKNYNSMPYPSSIGLNLSDNPLIIDELSYNMSALESEHSELIGKLTGEQKNAYDTII
                     NAVDQDKGGVFFLYGYGGTGKTFLWKILSAALRSKGEIVLNVASSGIAALLLSGGRTA
                     HSRFAIPINPTDDTFCTILPNSNLAGLIRRAKLIIWDEAPMVNRLCVENLDRSLRDIC
                     RIDNPNSMDTPFGGKVVVFGGDFRQVLPVVTQGKREDIVAASLNSSYIWDHVNVLRLT
                     VNMRLSALSSGASNADNENTIEDTRSFAEWILNIGNGTINSTDDGISEVEMPDDVLIK
                     DVEDPIGSMISSIYPQFLENLGNPTYYQERAILAPTHEIVNIINDRMMEYLEGDERSF
                     LSSDSICQSEKDADFNSELYTTDYLNSINLGGLPKHNLKLKVGVPVMLLRNVDQAGGL
                     CNGTRLQITGLGEKIIKAKILTGTHVGTITAIPRMLIVPSDKRIPFRFQRRQYPLSVC
                     FAMTINKSQGQSLQHVGLFLPKPVFSHGQLYVALSRVTNRKGLKVLILNKDKQLSKTT
                     QNVVYKEVLQHL"
     misc_feature    1546..2052
                     /gene="LOC139842119"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    3400..4515
                     /gene="LOC139842119"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(3487..3507,3721..3723)
                     /gene="LOC139842119"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
     misc_feature    4519..4785
                     /gene="LOC139842119"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    order(4549..4560,4666..4668,4672..4677)
                     /gene="LOC139842119"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350196"
     misc_feature    4684..4686
                     /gene="LOC139842119"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggatgtct ccacaccaaa ccatgcaaga aaaagaagtc ctgaagatac taatcaactt
       61 acacatgcca atactaaaag agcgagaaaa atacgaaagg aaattatgct tgcaaaaaga
      121 cgtaaaaagg agattcacac atcacaaata tcttattctg tcaatgcgta cccacaagaa
      181 aataccgtta tcgctagacg agttacgcag gatatttttt acaaaaaaag agagaaacaa
      241 aacaactata ttcccaacac aaagaaagat caacaaaact ttactgcttc caaacgcaaa
      301 actcaatgtt cgaagtctat acgatcagct tctgtctcta caacttcaaa tgatttagcc
      361 gttgtgtcat cattcaataa gttccacgtc agtgaagatt taaggtctaa aagtcatact
      421 tcatatacac acaatattcc tgaaacatcc acaacaagta cccaattgac tcagacattg
      481 cagcagactg ttaatacttc tgacaatcca agaggagtgc attcaaaaaa tgcacggtct
      541 gcaagaatgg aaatattaag acaacgtcgt aagggtaaaa cacttgctca agaaaaaata
      601 gtcgggattt caaaagaata ttatgatgaa ggagatttat cccacacttg ctcagcttgt
      661 ggggcaattt tgtggtatag agagacacgt cgtggtaaga atacaaaagg tttgccaggc
      721 gcattctcac tttgttgtct caaaggaaag atagctcttc ccgaattcac aaaaaaccca
      781 cctaaacttt tattagattt atacaccaat aatcatccaa agagcaaaca ttttattgaa
      841 aatgttagac aatacaatat gattttctct tttacttcaa tgggtggaaa gattgacata
      901 aatgtcaaca aaactaaagg tccttatacg tatcgtattc atggacaaaa catccataaa
      961 atgggtggtt tgataccaac ttttggaaca acaccaaaat attcacagtt gtacatctat
     1021 gacactacaa atgaagcagc aaacaggaaa aaagctatcg gtggaaaaaa ctgcaatcag
     1081 ccgacatcgt ccaaaaatac actagatgaa tcgcttatta ctgaattaat gcaacttcta
     1141 gacgagtgca atcctcttgt caaaatgtat cggatagcgc gtgaccgatt tgaaaaaaat
     1201 ccaaataaaa agtttaagat taagttaatt ggtcgacgaa gcactgatgg gcgcaactac
     1261 aatctaccaa caattgacga ggtagctgca ctaattgtag gtgacataga cttgaatttt
     1321 gataaaaggg atataataat agacagtcat gttgatggat tacagcgaat cagtgaactt
     1381 caccctcagt atctggcact tcaatatcct cttctgtttg cttatgccga agatggttac
     1441 aggacagata tttatcatcg tgacgttgat gccattacca caaagaagag gaagagagtt
     1501 acaatgcgag agtttttcgc atataaaata caagaaagag cgatcccaac acttgtacat
     1561 ctagcacgta agttacatca acaattattg gtggatgctt acacaatggt tgagtcggaa
     1621 agaatttcat acattaggaa taatcaaaag atactaagat ctgatacttt tagccactta
     1681 acagaagcat cgctcacggg tagtgctgta aatactatgt tgggtaagcg gataaaactt
     1741 ccttcatcat ttaccggaag cgccaggtat atgattgaaa attaccgtga tgctatggcg
     1801 ttgtgtcgag tttatgggta tccagacctc tttcttactt ttacgtgcaa ctccaagtgg
     1861 ccagaaatca ctagagcgtt agaaggttcc aacttcaatc cagaagataa accagcttac
     1921 caagctagaa tgttcaaaat aaagctggat cgtctcatga gtgatatcaa gaaaagaaaa
     1981 atctttggca gggtccgagc agaactttat acagtggagt ttcaaaaacg aggactacct
     2041 catgcacata tatgcatctt ccttgatgaa agagacaaaa tgtcagaacc tgaagatatt
     2101 gataaatata tttgcgccga aatacccgat aaaaatgaag acccagaact ttatcaactt
     2161 gtatcagatt taatgataca cggaccatgt ggagaaaaaa atccaaaatg cccgtgcacg
     2221 gacattgaga agaagtgcac caaaagattt cctaaacctt tttcagacgt aacaagtgtt
     2281 gataaagatg gttatcccgt atatagaaga agggacgatg gtcgtacagt aaagaaacaa
     2341 ggtcatgacc ttgataacag aaacgttgtg ccctataatc cccaactact taaaaagttt
     2401 caagctcatc taaatgttga gtggtgtaac caagtggggg caatcaggta tttattcaaa
     2461 tacatcaaca aaggaaacga tagggtcact gcaggcgtat gtgatgaaga tacagatgaa
     2521 attaaagaat actatgactg tagatatgtc tcatcttgcg aagccgtatg gaggatacta
     2581 tcttttgata taaatcatag aaatcctact gttatacgac taccatttca cctagaagat
     2641 caacattcaa ttgtgtttga tgaagaagat tttattgaaa atgttttaga taacccttca
     2701 gttaacacgt ctatgtttct agagtggatg aaatgtaacc aaataaacga agaagcacga
     2761 caattaactt atgttgagtt tcctacaaag tttgtttgga acaaacaaac tagggtttgg
     2821 actctaagga aaaaatttac aggatcaata ggtcgtattc atcacgtatc cccttcagca
     2881 ggtgatctat tttatcttcg gattttgttg aataaggtaa aaggtcctac ttcatatcaa
     2941 gatattagga cagtcgatgg taaggtatgt tctactttca aagatgcgtg ctatgaaatg
     3001 ggattattag atgatgatca agaatacatc gacggtatca aggaggccag tgcttgggat
     3061 tctggtaact ttgtacgatc tttatttgcc caattacttg catctaatag tctgagtaga
     3121 ccagaagtca tattcgaaaa ctcatttcag tatttgtctg tcgacattat tcatcaccga
     3181 ctttcaggta tagaaccaac aagagaaatg gtacgaaacc ttactttaca tgagatcgag
     3241 aagatactac aacgaaatgg tagtacttta aagaattata attctatgcc gtacccatct
     3301 tcaattggtt taaatttgtc tgataatcct cttattatag atgaattatc atacaacatg
     3361 tcggccctag aatctgaaca ttctgagctt attggtaaat taaccggaga acaaaaaaat
     3421 gcatatgaca ctattattaa tgctgttgat caggacaaag gtggtgtatt ctttttgtac
     3481 ggttatggag gcacaggtaa aacatttctt tggaaaatat tgtcagctgc attgcgtagt
     3541 aaaggagaga ttgtattgaa tgttgcatca agtgggattg cagctttgtt gttgagtgga
     3601 ggaaggacgg ctcattcccg ttttgcaatc cctattaatc caactgacga cacattttgt
     3661 acaattctcc ctaatagtaa tttggcagga ttaataagaa gagctaaact gataatttgg
     3721 gatgaagcgc caatggttaa tagactatgt gttgaaaatc ttgatcgttc tttacgcgat
     3781 atatgccgga tagataatcc aaatagcatg gatacaccgt ttggaggaaa agttgtagtg
     3841 tttggtggag attttcgaca agtcttacca gttgttacac aaggaaaaag agaggatata
     3901 gttgctgcat cacttaattc ttcatacata tgggatcatg ttaacgttct gagacttaca
     3961 gttaatatga gactttctgc actttcttca ggtgcttcta atgctgataa tgaaaatact
     4021 atagaggata ctcgaagctt tgcagaatgg atactaaaca tcggtaatgg tactataaat
     4081 tcgacagatg acggtatatc agaagttgaa atgcccgacg atgttttaat caaagatgtt
     4141 gaagatccta ttggttctat gattagttct atatatccac aatttttgga aaatttgggt
     4201 aatccaactt attatcaaga acgtgcaatt ctagctccaa cacacgaaat tgttaacatc
     4261 attaatgatc ggatgatgga gtatcttgag ggtgatgaaa ggtcattttt aagctccgac
     4321 agcatttgtc aatccgaaaa agacgcggac ttcaatagtg aattgtacac tacagattat
     4381 ctaaacagca tcaaccttgg tggcctccca aagcataatc ttaaactaaa agtaggtgta
     4441 ccagtaatgt tgcttaggaa tgtcgatcaa gctggaggat tgtgcaatgg tacacgttta
     4501 caaataacag gacttgggga aaaaattatc aaagctaaaa tcttaaccgg tacccacgtt
     4561 ggcacgataa ctgctattcc acgtatgcta attgttccat cagataaaag aattcctttc
     4621 agatttcaaa gaagacaata cccattgtct gtatgctttg caatgacaat caataaaagc
     4681 caaggacagt ccttacaaca tgttggttta tttctaccaa aaccagtttt tagtcacggg
     4741 caactttatg tggcactgtc tagagttacc aacagaaagg gactgaaggt gcttatttta
     4801 aacaaggata aacaattatc aaaaacaaca caaaacgtcg tatacaagga agtgttgcaa
     4861 cacctatag
//
LOCUS       XM_071832294             975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-dehydrosphinganine
            reductase TSC10A-like (LOC139842120), mRNA.
ACCESSION   XM_071832294
VERSION     XM_071832294.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..975
                     /gene="LOC139842120"
                     /note="3-dehydrosphinganine reductase TSC10A-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139842120"
     CDS             1..975
                     /gene="LOC139842120"
                     /codon_start=1
                     /product="3-dehydrosphinganine reductase TSC10A-like"
                     /protein_id="XP_071688395.1"
                     /db_xref="GeneID:139842120"
                     /translation="MADSKLSFLALLVLLSIILLLFLKLIVRPHPIKIPIKSRRVLIT
                     GGSTGIGLALARQAVAEGAHVTILARNLEKLQEAKTSIRLSTGIDVDIVSVDVCDFEG
                     VKNAIESVGVIDVLVCNQGVFVAHELENQDIEMVKRMINVNLIGSFNVVKAALPGMKN
                     RSDRKPASIAFMSSQAGQVGIYGYTSYSASKFGLRGLAEALQHEVITDDIHVSVIFPP
                     ETYTHSLTKERERRPQLTNIISTTSCAMKADEVAIKALNGIKSGCFLVHCNFKGFLLS
                     IVTVGCSPQRSYLMAFVEVISMGLVRIIALCFLWTWYDCIEKHSAHKK"
     misc_feature    115..816
                     /gene="LOC139842120"
                     /note="3-ketodihydrosphingosine reductase (KDSR) and
                     related proteins, classical (c) SDR; Region:
                     KDSR-like_SDR_c; cd08939"
                     /db_xref="CDD:187643"
     misc_feature    order(133..135,139..150,205..213,283..291,355..363,
                     424..426,514..522,559..561,571..573,649..660,664..669)
                     /gene="LOC139842120"
                     /note="putative NAD(P) binding site [chemical binding];
                     other site"
                     /db_xref="CDD:187643"
     misc_feature    order(298..300,379..387,391..393,406..408,418..420,
                     442..444,454..456,463..468,538..549,553..555,562..567,
                     574..579,583..591,595..603,607..612,631..633,748..750,
                     760..762,772..774,778..783,799..816)
                     /gene="LOC139842120"
                     /note="homotetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:187643"
     misc_feature    order(427..429,520..522,559..561,571..573)
                     /gene="LOC139842120"
                     /note="active site"
                     /db_xref="CDD:187643"
     misc_feature    order(625..627,631..633,748..750,757..762,772..774,
                     778..780,799..816)
                     /gene="LOC139842120"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:187643"
ORIGIN      
        1 atggcggact ccaagttatc atttcttgct cttcttgttc tcctctcaat catcctcctc
       61 ctcttcctta aactcatcgt ccgtccccac ccaatcaaaa tcccaatcaa atcacgtcgt
      121 gttctcatta ccggtgggtc caccggcatc ggcttagctc tagctcgcca agctgtagcc
      181 gaaggtgcac atgtcactat cttagctcgt aacttggaaa aattacaaga agctaaaact
      241 tcaattcgtc tatcaaccgg tatagacgtt gatatcgtaa gtgtggacgt ttgcgacttt
      301 gaaggtgtta agaatgcaat tgaaagtgtg ggtgtgattg atgttttggt ttgtaatcaa
      361 ggtgtgtttg ttgctcatga gcttgagaat caggatattg aaatggttaa gagaatgatt
      421 aatgttaatt tgattgggtc gtttaatgtg gttaaagctg cattacctgg aatgaagaat
      481 cgaagtgatc gaaagccagc ttcgattgct tttatgtcct ctcaggcggg ccaggtgggc
      541 atatatggtt atacatcata ttcagctagt aagtttggcc taaggggttt agcagaagct
      601 ctacaacatg aggttattac tgatgacatt catgtttcag ttatattccc ccctgaaaca
      661 tatacgcata gtttaaccaa agagagggaa agaagaccac aattaacaaa catcatatct
      721 acgacctctt gtgcaatgaa agccgatgag gttgcaatta aagcattgaa tggtatcaaa
      781 tctggttgtt ttttggtaca ctgcaacttt aaagggttct tgttgtccat agtaactgtg
      841 ggttgttcgc ctcagagatc gtaccttatg gcgttcgttg aggttatctc tatgggttta
      901 gtgcgtatca tagcgttgtg ttttctgtgg acctggtacg actgtattga aaaacattct
      961 gcacacaaga aatag
//
LOCUS       XM_071832295            1002 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-dehydrosphinganine
            reductase TSC10A-like (LOC139842121), mRNA.
ACCESSION   XM_071832295
VERSION     XM_071832295.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1002
                     /gene="LOC139842121"
                     /note="3-dehydrosphinganine reductase TSC10A-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139842121"
     CDS             1..1002
                     /gene="LOC139842121"
                     /codon_start=1
                     /product="3-dehydrosphinganine reductase TSC10A-like"
                     /protein_id="XP_071688396.1"
                     /db_xref="GeneID:139842121"
                     /translation="MAYSKLSFLALLVLPSIILLIILKLIVRPHPIKIPIKSRRVLIT
                     GGSTGIGLALARQAAAEGAHVTILARNLENLREAKTSIRSSTGIDVDIVSADVCDFEA
                     VKNAVESVGMIDVLVCNQGVFVCHELENQDIEVVKRMIDVNLIGTFNLVKVVLPGMRN
                     RSDRKPVSISFMSSQAGQVGIYGSTSYSASKFGLRGLAEALQQEVIADDIHVSLIFPP
                     ETNTDTLTKEKQRRPQLTNIISASSTAMQVDEVAKKTLNGIKSGCFYVHCNWHGLILS
                     LISSGYSPQRSYLMAFIEVIFAGFARIISLCFQWTWYDCIEKHRAHQKECTTTITLT"
     misc_feature    115..798
                     /gene="LOC139842121"
                     /note="3-ketodihydrosphingosine reductase (KDSR) and
                     related proteins, classical (c) SDR; Region:
                     KDSR-like_SDR_c; cd08939"
                     /db_xref="CDD:187643"
     misc_feature    order(133..135,139..150,205..213,283..291,355..363,
                     424..426,514..522,559..561,571..573,649..660,664..669)
                     /gene="LOC139842121"
                     /note="putative NAD(P) binding site [chemical binding];
                     other site"
                     /db_xref="CDD:187643"
     misc_feature    order(298..300,379..387,391..393,406..408,418..420,
                     442..444,454..456,463..468,538..549,553..555,562..567,
                     574..579,583..591,595..603,607..612,631..633,748..750,
                     760..762,772..774,778..783)
                     /gene="LOC139842121"
                     /note="homotetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:187643"
     misc_feature    order(427..429,520..522,559..561,571..573)
                     /gene="LOC139842121"
                     /note="active site"
                     /db_xref="CDD:187643"
ORIGIN      
        1 atggcatact ccaagttatc atttcttgct cttcttgttc tcccctcaat catcctcctc
       61 atcatcctta aactcatcgt ccgtccccac ccaatcaaaa tcccaatcaa atcacgtcgc
      121 gttctcatca ctggtgggtc caccggcatt ggcttagctc tagctcgcca agctgcagcc
      181 gaaggtgcac atgtcactat attagctcgt aacctagaaa atttacgaga agctaaaact
      241 tcaattcgtt catctactgg tattgatgtt gatattgtaa gtgctgacgt ttgcgacttt
      301 gaagctgtta agaatgcagt tgaaagtgtg ggtatgattg atgttttggt ttgtaatcaa
      361 ggtgtgtttg tttgtcatga gcttgagaat caggatattg aagtagttaa gagaatgatt
      421 gatgttaatt tgattgggac gtttaatttg gttaaagttg tgttgcctgg aatgaggaat
      481 cgtagtgatc gaaagccggt ttctatttcg tttatgtctt ctcaggccgg ccaggtggga
      541 atatatggtt ctacatcata ttcagctagt aagtttggcc taaggggttt agcagaagct
      601 ttgcaacaag aggttattgc tgatgacatt catgtttcac ttatattccc cccagaaaca
      661 aatacagata ctttaaccaa agagaaacag agaagaccac aattgacaaa catcatatct
      721 gcgtcctcaa ctgcaatgca agttgacgag gttgcaaaga aaacattgaa tggtataaaa
      781 tctggttgtt tttatgtaca ttgcaattgg catggattaa tcttatcctt aatatcttcg
      841 ggttactcgc ctcaaaggtc ataccttatg gcattcatcg aggttatttt tgccggtttc
      901 gcgcgtatta tatcattgtg ttttcaatgg acctggtacg actgcattga aaaacatcgt
      961 gcacatcaga aagagtgtac aactacaata acactaacct aa
//
LOCUS       XM_071832296            1043 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842122), mRNA.
ACCESSION   XM_071832296
VERSION     XM_071832296.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1043
                     /gene="LOC139842122"
                     /note="uncharacterized LOC139842122; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842122"
     CDS             1..1005
                     /gene="LOC139842122"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688397.1"
                     /db_xref="GeneID:139842122"
                     /translation="MYFLIICQFFLVCSILHLSQSLPICRNSCASIQIDYPFGIDDGC
                     GAPLYRNMLNCSTASSTSATTTTITNNNSNNNNNNSTPPFLTPTFSSTPTSNTITNPS
                     STSLFFQTPSGSYKVESIDYNSKTVTIYDPSMSTCTILQPHRDFLMSDIQSALIPPSP
                     DTIFALVNCSIDSPVLNHYKSLCFNFSTTHSCVDLYNSCTSFKIFQMVSNDTPPACCF
                     TSYNTLKFMSMNILDCTHYTSFYDADKLNDDDKPLDWSYGIKLSYSLPDTGCDRCRKS
                     GGTCGFDVDTEGMLCICSSTLNSTRQCGAGTTDNGDRSLVVPYLHYLLLTIVVSFSFF
                     "
     misc_feature    73..393
                     /gene="LOC139842122"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; Region: GUB_WAK_bind; pfam13947"
                     /db_xref="CDD:464052"
     misc_feature    <772..882
                     /gene="LOC139842122"
                     /note="Wall-associated receptor kinase C-terminal; Region:
                     WAK_assoc; pfam14380"
                     /db_xref="CDD:464161"
ORIGIN      
        1 atgtattttc ttatcatatg tcaattcttc cttgtttgtt ctattctcca tctttctcaa
       61 tctcttccga tttgtcgaaa ctcttgtgct tccatccaaa tcgattatcc ttttggtatc
      121 gacgatggtt gtggggcccc gctctaccgc aacatgctta actgctccac tgcatcctct
      181 acctctgcca ccacgaccac aataactaac aacaatagca acaacaataa caataacagt
      241 acccctcctt ttctcactcc cactttttcc tcgacgccca cttccaatac cattaccaac
      301 ccttcttcga cgtcactttt tttccaaacc ccgtcgggta gctacaaggt cgagtccatc
      361 gactacaact ccaaaacggt tacaatttac gacccgtcaa tgtccacttg cacaattctt
      421 caacctcatc gtgactttct tatgtccgat atccaatccg ccctaattcc tccctctccc
      481 gacactatct ttgcgctcgt taattgctca atcgattccc ccgttctcaa ccactataaa
      541 tccctctgct tcaacttctc tactacccat tcatgtgttg atttatacaa ctcatgtact
      601 tcttttaaga tctttcaaat ggtgtctaat gatactccac ctgcttgttg ctttacatct
      661 tacaatacac ttaagtttat gagcatgaac atacttgatt gtacgcatta tactagcttt
      721 tacgatgcgg acaagttgaa cgatgatgat aaaccgttgg attggtcgta cgggataaag
      781 ctatcgtata gtttaccgga cacagggtgt gatcgatgtc gtaaatcagg cggaacttgt
      841 ggatttgatg ttgacacaga aggaatgttg tgtatttgct cctcaaccct taattccaca
      901 agacaatgtg gtgcaggtac aactgataat ggagatagat cattagtagt tccatatctg
      961 cattatctct tattaaccat agttgtttct tttagttttt tttaatgaaa acaaaacatg
     1021 tagtcaatgt tgttaattat gaa
//
LOCUS       XM_071832297             834 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            bHLH162-like (LOC139842123), transcript variant X1, mRNA.
ACCESSION   XM_071832297
VERSION     XM_071832297.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..834
                     /gene="LOC139842123"
                     /note="transcription factor bHLH162-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842123"
     CDS             181..822
                     /gene="LOC139842123"
                     /codon_start=1
                     /product="transcription factor bHLH162-like isoform X1"
                     /protein_id="XP_071688398.1"
                     /db_xref="GeneID:139842123"
                     /translation="MISCLLRYRYLHRYQIEKTFDRRMNKCDQSSEKLDRKIVEKNRR
                     IHMKGLCYELNSLIPSSFNQPNKIITQEDRYDQSIAYIEQLRSKIEVMKKKREEALRL
                     VNNDNISDTSYDVRNRQVVVSQSTIDVKEIEGGSQVFLTTKLEPNFSLSEVIRIVEDG
                     GAEVFKGGYTTLGDKVIYTLHAKKSMILLNTKGHKQGCKIRYSEINRSGLWKD"
     misc_feature    274..492
                     /gene="LOC139842123"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     Region: bHLH_SF; cl00081"
                     /db_xref="CDD:469605"
     misc_feature    order(298..303,307..309,322..324,388..393)
                     /gene="LOC139842123"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381484"
     misc_feature    order(316..321,328..333,337..342,352..354,391..396,
                     403..408,415..417,421..426,433..438)
                     /gene="LOC139842123"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:381484"
ORIGIN      
        1 atacatggcg tattttaatt gaaaatgttg gatgtttgat atagttttag atatagggta
       61 tatacctggc catgtgccaa gattagcaag tttatggctt atttataggc atatctatgt
      121 acagtacaaa agctagagaa ttacagtaat tattaagctc gatcttacga ttttaatttg
      181 atgataagtt gcttgctccg atatcgatat ctccatcgtt accagattga gaagacattc
      241 gatcgaagaa tgaataaatg cgaccaaagc tctgaaaaac tcgatcggaa aatagtcgaa
      301 aagaacagaa gaattcatat gaaaggtctt tgttacgagc tcaattctct cattccttct
      361 tcgttcaatc agcctaataa gataataaca caagaggacc ggtatgatca atcaatcgct
      421 tatatcgagc aactaagaag taaaattgaa gtgatgaaga agaagaggga agaagcatta
      481 agattagtga acaatgacaa tataagtgat acaagttatg atgttagaaa ccgccaagtc
      541 gtggtaagtc agtcgacgat agacgtgaaa gaaatagaag gcggttcgca ggtgtttttg
      601 acaacgaagt tagaaccaaa tttttcgtta tctgaagtca ttagaatagt agaagatgga
      661 ggagctgagg tgtttaaggg tggttacacc actcttggtg ataaagtcat ttataccctt
      721 catgctaaga aatcaatgat tttattaaac accaaagggc acaagcaagg ttgcaaaatt
      781 cgctattcgg agattaatcg gtcgggactt tggaaagatt aatcgataat tcgg
//
LOCUS       XM_071832298            1058 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            bHLH162-like (LOC139842123), transcript variant X2, mRNA.
ACCESSION   XM_071832298
VERSION     XM_071832298.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1058
                     /gene="LOC139842123"
                     /note="transcription factor bHLH162-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842123"
     CDS             177..803
                     /gene="LOC139842123"
                     /codon_start=1
                     /product="transcription factor bHLH162-like isoform X2"
                     /protein_id="XP_071688399.1"
                     /db_xref="GeneID:139842123"
                     /translation="MISCLLRYRYLHRYQIEKTFDRRMNKCDQSSEKLDRKIVEKNRR
                     IHMKGLCYELNSLIPSSFNQPNKIITQEDRYDQSIAYIEQLRSKIEVMKKKREEALRL
                     VNNDNISDTSYDVRNRQVVVSQSTIDVKEIEGGSQVFLTTKLEPNFSLSEVIRIVEDG
                     GAEVFKGGYTTLGDKVIYTLHAKARFTRIGIDTTGVRKQLQELINPGV"
     misc_feature    270..488
                     /gene="LOC139842123"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     Region: bHLH_SF; cl00081"
                     /db_xref="CDD:469605"
     misc_feature    order(294..299,303..305,318..320,384..389)
                     /gene="LOC139842123"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381484"
     misc_feature    order(312..317,324..329,333..338,348..350,387..392,
                     399..404,411..413,417..422,429..434)
                     /gene="LOC139842123"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:381484"
ORIGIN      
        1 atggcgtatt ttaattgaaa atgttggatg tttgatatag ttttagatat agggtatata
       61 cctggccatg tgccaagatt agcaagttta tggcttattt ataggcatat ctatgtacag
      121 tacaaaagct agagaattac agtaattatt aagctcgatc ttacgatttt aatttgatga
      181 taagttgctt gctccgatat cgatatctcc atcgttacca gattgagaag acattcgatc
      241 gaagaatgaa taaatgcgac caaagctctg aaaaactcga tcggaaaata gtcgaaaaga
      301 acagaagaat tcatatgaaa ggtctttgtt acgagctcaa ttctctcatt ccttcttcgt
      361 tcaatcagcc taataagata ataacacaag aggaccggta tgatcaatca atcgcttata
      421 tcgagcaact aagaagtaaa attgaagtga tgaagaagaa gagggaagaa gcattaagat
      481 tagtgaacaa tgacaatata agtgatacaa gttatgatgt tagaaaccgc caagtcgtgg
      541 taagtcagtc gacgatagac gtgaaagaaa tagaaggcgg ttcgcaggtg tttttgacaa
      601 cgaagttaga accaaatttt tcgttatctg aagtcattag aatagtagaa gatggaggag
      661 ctgaggtgtt taagggtggt tacaccactc ttggtgataa agtcatttat acccttcatg
      721 ctaaggcaag atttacgagg attgggatag atacaacagg cgtacgtaag caattgcagg
      781 agttgatcaa tccaggcgtt taaagataaa aatttacgag attcgtgatg gaaatatgaa
      841 catttaaaaa agacactttg tgatgattgt tattattttg gcggaaaaac gttcgaaaaa
      901 cgataacatg cattatgagt agtgttttaa ttaggggttt tttttatcat ttttttcatc
      961 tatgtgaagt ttttttttca aaatttagcc cgatttaaag tttagagttt agtgtttcga
     1021 gtttagggga aaccgttcgt gttaaaaatt caatataa
//
LOCUS       XM_071832299             810 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            bHLH162-like (LOC139842123), transcript variant X3, mRNA.
ACCESSION   XM_071832299
VERSION     XM_071832299.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..810
                     /gene="LOC139842123"
                     /note="transcription factor bHLH162-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842123"
     CDS             181..795
                     /gene="LOC139842123"
                     /codon_start=1
                     /product="transcription factor bHLH162-like isoform X3"
                     /protein_id="XP_071688400.1"
                     /db_xref="GeneID:139842123"
                     /translation="MISCLLRYRYLHRYQIEKTFDRRMNKCDQSSEKLDRKIVEKNRR
                     IHMKGLCYELNSLIPSSFNQPNKIITQEDRYDQSIAYIEQLRSKIEVMKKKREEALRL
                     VNNDNISDTSYDVRNRQVVVSQSTIDVKEIEGGSQVFLTTKLEPNFSLSEVIRIVEDG
                     GAEVFKGGYTTLGDKVIYTLHAKGLEYIEANKMHAVNIIHVSTY"
     misc_feature    274..492
                     /gene="LOC139842123"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     Region: bHLH_SF; cl00081"
                     /db_xref="CDD:469605"
     misc_feature    order(298..303,307..309,322..324,388..393)
                     /gene="LOC139842123"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381484"
     misc_feature    order(316..321,328..333,337..342,352..354,391..396,
                     403..408,415..417,421..426,433..438)
                     /gene="LOC139842123"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:381484"
ORIGIN      
        1 atacatggcg tattttaatt gaaaatgttg gatgtttgat atagttttag atatagggta
       61 tatacctggc catgtgccaa gattagcaag tttatggctt atttataggc atatctatgt
      121 acagtacaaa agctagagaa ttacagtaat tattaagctc gatcttacga ttttaatttg
      181 atgataagtt gcttgctccg atatcgatat ctccatcgtt accagattga gaagacattc
      241 gatcgaagaa tgaataaatg cgaccaaagc tctgaaaaac tcgatcggaa aatagtcgaa
      301 aagaacagaa gaattcatat gaaaggtctt tgttacgagc tcaattctct cattccttct
      361 tcgttcaatc agcctaataa gataataaca caagaggacc ggtatgatca atcaatcgct
      421 tatatcgagc aactaagaag taaaattgaa gtgatgaaga agaagaggga agaagcatta
      481 agattagtga acaatgacaa tataagtgat acaagttatg atgttagaaa ccgccaagtc
      541 gtggtaagtc agtcgacgat agacgtgaaa gaaatagaag gcggttcgca ggtgtttttg
      601 acaacgaagt tagaaccaaa tttttcgtta tctgaagtca ttagaatagt agaagatgga
      661 ggagctgagg tgtttaaggg tggttacacc actcttggtg ataaagtcat ttataccctt
      721 catgctaagg gacttgaata catagaagca aacaagatgc atgctgtaaa cataattcac
      781 gtaagcacct attgatccgt ttgtggctaa
//
LOCUS       XM_071832300             931 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            bHLH162-like (LOC139842123), transcript variant X4, mRNA.
ACCESSION   XM_071832300
VERSION     XM_071832300.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..931
                     /gene="LOC139842123"
                     /note="transcription factor bHLH162-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842123"
     CDS             180..785
                     /gene="LOC139842123"
                     /codon_start=1
                     /product="transcription factor bHLH162-like isoform X4"
                     /protein_id="XP_071688401.1"
                     /db_xref="GeneID:139842123"
                     /translation="MISCLLRYRYLHRYQIEKTFDRRMNKCDQSSEKLDRKIVEKNRR
                     IHMKGLCYELNSLIPSSFNQPNKIITQEDRYDQSIAYIEQLRSKIEVMKKKREEALRL
                     VNNDNISDTSYDVRNRQVVVSQSTIDVKEIEGGSQVFLTTKLEPNFSLSEVIRIVEDG
                     GAEVFKGGYTTLGDKVIYTLHAKVMGVDQLLIQYTEKKRKK"
     misc_feature    273..491
                     /gene="LOC139842123"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     Region: bHLH_SF; cl00081"
                     /db_xref="CDD:469605"
     misc_feature    order(297..302,306..308,321..323,387..392)
                     /gene="LOC139842123"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381484"
     misc_feature    order(315..320,327..332,336..341,351..353,390..395,
                     402..407,414..416,420..425,432..437)
                     /gene="LOC139842123"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:381484"
ORIGIN      
        1 tacatggcgt attttaattg aaaatgttgg atgtttgata tagttttaga tatagggtat
       61 atacctggcc atgtgccaag attagcaagt ttatggctta tttataggca tatctatgta
      121 cagtacaaaa gctagagaat tacagtaatt attaagctcg atcttacgat tttaatttga
      181 tgataagttg cttgctccga tatcgatatc tccatcgtta ccagattgag aagacattcg
      241 atcgaagaat gaataaatgc gaccaaagct ctgaaaaact cgatcggaaa atagtcgaaa
      301 agaacagaag aattcatatg aaaggtcttt gttacgagct caattctctc attccttctt
      361 cgttcaatca gcctaataag ataataacac aagaggaccg gtatgatcaa tcaatcgctt
      421 atatcgagca actaagaagt aaaattgaag tgatgaagaa gaagagggaa gaagcattaa
      481 gattagtgaa caatgacaat ataagtgata caagttatga tgttagaaac cgccaagtcg
      541 tggtaagtca gtcgacgata gacgtgaaag aaatagaagg cggttcgcag gtgtttttga
      601 caacgaagtt agaaccaaat ttttcgttat ctgaagtcat tagaatagta gaagatggag
      661 gagctgaggt gtttaagggt ggttacacca ctcttggtga taaagtcatt tatacccttc
      721 atgctaaggt tatgggagtc gaccaattat tgatccagta cacagaaaaa aaaagaaaaa
      781 aataaaataa gaaagggatt ctaacaaaat ttgtaatctt gtgaataatt tggaatcaaa
      841 tcgtactgaa ttcagacaga aaacaaaata cctacagttt gagaatgatg gaaaactgtt
      901 tacgttctta tctgtaccta tatatgtata a
//
LOCUS       XM_071832301             825 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842125), mRNA.
ACCESSION   XM_071832301
VERSION     XM_071832301.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..825
                     /gene="LOC139842125"
                     /note="uncharacterized LOC139842125; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842125"
     CDS             1..825
                     /gene="LOC139842125"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688402.1"
                     /db_xref="GeneID:139842125"
                     /translation="MAKDTEFNASKNFGVANIRTYVPLNLVLEELNYDSWRELFETHC
                     MSFDLIWHLNGSSVASGPDDKTWKKTESLIKLWIYGTLSKPLLQTIMKRKYYAHQSWD
                     HIEQLFRNNKESRAMELENELRTIVLCDNTMTKYCCKIQMISDLLENIDSGVSDKNLV
                     TYMVNGLPEKFDNTAEITTYKVSIPTFLEARSMLLLAETRIQNCINIPTTAHDVHSSS
                     NSILYKNASSSGSHNRNRGNNRILNYTWQTGRDGSGWVKDQMGLGQNVSLVEMGQN"
     misc_feature    229..609
                     /gene="LOC139842125"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggctaaag atacagaatt caatgcctcc aaaaattttg gagtcgctaa tatacgcacc
       61 tacgttcctc tcaatctcgt tcttgaagaa ttaaattatg attcatggcg agaactcttt
      121 gaaacccact gtatgtcatt tgacttgatc tggcacctta atggctcttc tgttgcaagc
      181 ggaccggatg acaaaacttg gaagaaaaca gaatcgctga ttaagctttg gatctatggc
      241 actcttagca agcctcttct acaaactatt atgaaaagaa agtattatgc gcatcagtcg
      301 tgggatcaca tcgagcaact tttcagaaat aacaaggaaa gtcgtgcaat ggagttagaa
      361 aacgagctta gaaccatcgt tctctgtgac aacactatga ccaagtattg ctgtaagatt
      421 caaatgatct cagatttact tgaaaacatt gattctggtg tatccgataa gaacctggtt
      481 acatatatgg ttaatgggtt gcccgaaaaa ttcgacaaca ctgccgaaat cacaacttac
      541 aaagtctcga tcccaacctt ccttgaagct cgatcaatgc ttctacttgc ggagacacgt
      601 atacaaaatt gcattaacat ccccactacc gctcacgatg ttcactcatc aagcaactcc
      661 attctctaca aaaatgcatc ttcttcaggt tctcataatc gaaatcgtgg taataatcgt
      721 attttaaatt atacctggca aacgggtcga gatgggtcgg gttgggtcaa agatcaaatg
      781 ggcttgggtc aaaatgtgtc attggtcgaa atgggtcaga attaa
//
LOCUS       XM_071832303             339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00300-like (LOC139842126), mRNA.
ACCESSION   XM_071832303
VERSION     XM_071832303.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..339
                     /gene="LOC139842126"
                     /note="uncharacterized mitochondrial protein
                     AtMg00300-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842126"
     CDS             1..339
                     /gene="LOC139842126"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00300-like"
                     /protein_id="XP_071688404.1"
                     /db_xref="GeneID:139842126"
                     /translation="MELHGMLKTAESNMTKAKPTTTLLAIREGGIKKKKIKVKGKDKG
                     KGHINKKGIVKLQSDGILEPFDVKTYDECDSCLLGKMTKAPFKGNSERGKDLLELVHT
                     DVCGPFRSPT"
     misc_feature    <139..243
                     /gene="LOC139842126"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
ORIGIN      
        1 atggagctcc atggcatgtt gaagaccgct gagagtaaca tgaccaaagc taagcccaca
       61 actaccttac tagccattcg tgaaggtggg atcaagaaga agaaaatcaa agtgaagggc
      121 aaagacaagg gtaagggcca tataaacaag aaaggcatag taaaactcca gtcagatgga
      181 attttagaac catttgatgt taaaacatat gatgaatgtg attcttgctt attaggaaaa
      241 atgacaaagg cacctttcaa aggaaactct gaacgaggta aagatctatt ggagttggta
      301 cacaccgatg tgtgtggtcc tttcagatca cctacttga
//
LOCUS       XM_071832304            1347 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842127), mRNA.
ACCESSION   XM_071832304
VERSION     XM_071832304.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1347
                     /gene="LOC139842127"
                     /note="uncharacterized LOC139842127; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842127"
     CDS             1..1347
                     /gene="LOC139842127"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688405.1"
                     /db_xref="GeneID:139842127"
                     /translation="MHQLPENLQSVQILPIHNVHQNLPTHDVQQNLPTNEESTNLHTP
                     NLKEARPEVPPPNTEEFDFFNYGVENVCKIKKTDHPFESVVASSASEEENDREDQDED
                     ENEEEEEKKDVFWNMPLLLSEHDQETESTSQITTSYRVSDLIKVRQTFLNKDDFVNHL
                     YTKCLEENFQIKPVKSDKSRFTAKCMLPNCEWKCSAYKIRHTDNFIVKKLHDVHTCSR
                     TQIMGNNKHASKKVLGSILMESFKAANRDYNPKDIRDDVGNRFRVSISYNQAWRAKCH
                     AIEMLRGSMDDSFRMLPIYLHNIKIHNPGSMTNVVTDNENRFVMCYMSFGAVIRSFVQ
                     NVRPIIIVDGAHLKAGYLGTNLVAVAMDANNGILLLAYGIGEGETNEAYRLLDFHDHV
                     SVFQRRLKASHKYLNDVGFNKWSRSHAGHVRLTYIQTQERKKNLAYVIKHTQIRKQ"
     misc_feature    424..621
                     /gene="LOC139842127"
                     /note="MuDR family transposase; Region: DBD_Tnp_Mut;
                     pfam03108"
                     /db_xref="CDD:427142"
ORIGIN      
        1 atgcatcaac tcccagaaaa cttacagtca gtgcaaatcc taccaataca caatgtccat
       61 caaaacctac caacacacga tgtccaacaa aacctaccaa caaacgagga gagcacaaac
      121 cttcacacac ccaatttgaa agaagcacga cctgaagtac cacctccaaa cacagaagag
      181 tttgatttct tcaactatgg agttgagaac gtatgtaaaa ttaaaaaaac agatcaccct
      241 tttgaatcag ttgtcgcgtc tagtgcttcg gaggaagaaa atgacagaga agatcaagat
      301 gaagatgaaa atgaagaaga ggaagaaaaa aaggatgtat tctggaatat gccactttta
      361 ttgagtgagc atgaccaaga gactgaatct acgagccaaa taacaaccag ttatagagta
      421 tccgatttga ttaaagttcg acaaactttt ttaaacaagg atgattttgt aaaccatcta
      481 tacacaaaat gtcttgaaga aaacttccaa attaagcctg taaagtctga caaatctcga
      541 ttcactgcta aatgcatgtt gccaaattgt gagtggaaat gtagtgcata caaaatacgc
      601 cacactgaca acttcatcgt aaagaaattg catgacgtac acacatgctc acgtacccaa
      661 attatgggaa ataataaaca tgcttccaaa aaggtgttag gaagtattct gatggaatcg
      721 ttcaaagctg caaatcgaga ctataatcca aaagatatac gtgatgatgt tggcaaccgt
      781 tttcgggtga gcatttctta caatcaagca tggagagcca agtgtcatgc aatagagatg
      841 cttcgtggca gtatggatga ctcgttccga atgcttccca tttatcttca taacattaag
      901 attcataacc caggaagcat gacaaatgtg gtgactgaca atgaaaatag attcgtgatg
      961 tgttacatgt cctttggcgc agttattcga tcatttgtcc aaaatgttcg ccctattatc
     1021 atcgttgatg gtgcacattt gaaagctgga tacttgggta caaatttagt cgctgttgca
     1081 atggatgcca ataacggaat tttgctattg gcttatggaa ttggtgaagg cgagacaaac
     1141 gaggcttatc gtttgttaga ttttcacgat catgttagtg tatttcaacg aagattaaaa
     1201 gcgtctcaca agtatctaaa tgacgttggt ttcaacaaat ggtccagaag tcatgctggt
     1261 catgttagat tgacctacat acagacgcaa gaacgcaaga aaaatcttgc gtatgtcatc
     1321 aaacacacgc aaatacgcaa acaataa
//
LOCUS       XM_071832305            2541 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            2.7-like (LOC139842129), mRNA.
ACCESSION   XM_071832305
VERSION     XM_071832305.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 34% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2541
                     /gene="LOC139842129"
                     /note="protein NRT1/ PTR FAMILY 2.7-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842129"
     CDS             1..2493
                     /gene="LOC139842129"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 2.7-like"
                     /protein_id="XP_071688406.1"
                     /db_xref="GeneID:139842129"
                     /translation="MGMGGAHGVLEWWFKNLKIERKGAACIDDDDFHSGVVMGLFELK
                     REHGSSMFCWVVARGGVRLYSKQKNGRKDNKEDVGGGSWCNDYVKLWVAIELDDCVGC
                     SWPQWLVEGWYFNGHQIDGSRDGFASTEIGVAATIWDSDGSDCGQKNTVATKHEYDSR
                     CNNLLVMVFLGQENENNINSCWVVARGGVRLYSKQKNERKDNKEDVGGGSWCNDYVKL
                     WVAIELDDCVGCSWPQWLVEGWYFNGHQIDGSRDSFASVMPELSVEGIEAENLIIFFV
                     AMNAEQQTLNAPSKGGWITFPFLIATMAGLTLAVGGWFNNMIVYLVNEFNVKSIDAAQ
                     IANIVVGYGSFISIGAAILADSFIGPFTVIFMSSMLSSVGLILLTLTATVDSLKPLPC
                     ENGSNLCVGPTHGQLAILYTSLALSLLGLSGTRFTLAAMGADQFDNPKHQEVFINWHI
                     FTMFVGMLVSGVGIVYVEDNVSWGVGYGLCVASNIIGLGIFVLGKRYYRLLKTRSSPF
                     TRLACVAVAAFRKRKVFLSSKSEDYMQDQGAQETEIIRTTPTNSLKFLNHAALVTDGD
                     TTSDGFIKKPWNLCTIQQVEDLKTLIKISPLWSTGILLNTPITIMMGLVVLQALTMNR
                     HLNHHIEIPAGSMTTIILLSSSISLALLEHLLLPAFRKLTSISLTPLQITGVGHALTI
                     STMAIAALVESKRLAMARSHNLDGNSIVPMSVFWLVPQLALVGAAEAFHFPAQVSLYY
                     QEFPKSLKSMAVAMVGTFVGIAFLLGTAVVDFLRRITGWLPNGINEGRIDNVYWVLSV
                     FGLINFGYFLLCSLLYKCQNVAKEDLDRSSPS"
     misc_feature    886..2442
                     /gene="LOC139842129"
                     /note="Major Facilitator Superfamily; Region: MFS;
                     cl28910"
                     /db_xref="CDD:475125"
     misc_feature    order(916..921,928..933,940..942,1039..1041,1261..1266,
                     1270..1278,1285..1287,1348..1350,1357..1362,1369..1371,
                     1801..1803,1810..1815,1822..1830,1837..1839,1933..1935,
                     1945..1947,2179..2184,2194..2196,2206..2208,2254..2256,
                     2263..2268,2275..2280,2287..2289)
                     /gene="LOC139842129"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:349949"
ORIGIN      
        1 atgggtatgg gtggtgctca cggtgttctt gagtggtggt tcaaaaactt gaaaatagaa
       61 agaaagggag cagcatgcat agacgatgat gattttcaca gtggggtagt tatgggtttg
      121 tttgaattga aaagggaaca tggtagcagc atgttttgtt gggtggttgc tcgtggtggt
      181 gttcggttat actcaaaaca gaaaaacgga aggaaagata ataaagagga tgttggtggt
      241 ggttcttggt gtaatgatta tgttaaactt tgggtagcaa tcgaactcga tgattgtgtt
      301 gggtgttctt ggccacagtg gttagtcgaa gggtggtatt ttaatggtca tcaaatagat
      361 ggtagccgtg atggttttgc gagtacagaa attggtgtag cagcaacaat atgggacagt
      421 gatggtagcg attgtggaca gaaaaataca gtagccacaa aacatgagta tgatagcagg
      481 tgtaacaatt tattggtgat ggtttttctc ggtcaggaaa acgaaaacaa tattaatagt
      541 tgttgggtgg ttgctcgtgg tggtgttcgg ttatactcaa aacagaaaaa cgaaaggaaa
      601 gataataaag aggatgttgg tggtggttct tggtgtaatg attatgttaa actttgggta
      661 gcaatcgaac tcgatgattg tgttgggtgt tcttggccac agtggttagt cgaagggtgg
      721 tattttaatg gtcatcaaat agatggtagc cgtgatagtt ttgcgagtgt aatgccagag
      781 ttatcagtag aaggaataga agctgaaaac ctaattatat tctttgtagc catgaatgct
      841 gaacaacaga cacttaatgc cccctccaaa ggtggatgga tcacctttcc tttcctcata
      901 gcaacaatgg cggggttgac actagcagtc ggaggatggt ttaataatat gatcgtttat
      961 ctagttaacg agtttaacgt taaaagcatt gatgcagctc agattgcaaa tattgtcgtc
     1021 ggttacggtt cctttatctc cattggtgca gccatattgg ccgactcatt tattggaccg
     1081 ttcactgtca tttttatgtc gtctatgctg tcttctgtag gcctaatact actaacacta
     1141 actgcgacag ttgattcgtt aaagcctcta ccatgcgaaa atggatcaaa tctttgtgtg
     1201 ggaccaacac atggtcaact cgcgatcttg tatactagcc tggctctttc attattgggt
     1261 ctttcgggta caaggtttac gctagccgca atgggagcag accaatttga caacccaaag
     1321 caccaagagg tattcattaa ctggcacatc tttaccatgt ttgtagggat gcttgttagt
     1381 ggagttggga tcgtttatgt tgaagacaat gtgagttggg gtgttggtta tggtctatgt
     1441 gtagcgtcta acatcatcgg gttaggtatc tttgtgttgg gtaagcggta ttaccggcta
     1501 ttgaagaccc ggtctagccc atttacccgg ctggcttgtg ttgcagtggc agctttccgg
     1561 aaaaggaaag tttttctgtc atcaaaaagt gaagattata tgcaagatca aggagctcaa
     1621 gaaacagaga taattagaac gactcccaca aatagcctca agttcttgaa tcatgcagct
     1681 ctagtgaccg atggagatac tacctcggac ggcttcatca aaaaaccgtg gaacctatgc
     1741 acaatacaac aagtagaaga tctcaagact cttatcaaaa tctcaccact ttggtcaacc
     1801 ggtatactat tgaacacgcc cataaccatc atgatgggac tagtcgtcct ccaagcacta
     1861 accatgaatc gtcatctcaa tcatcatatc gaaatcccag ccgggagcat gacaaccata
     1921 attttgctct cctcttccat ttctctagcc ctactcgagc atttgctact tcccgctttt
     1981 cgaaaactta ccagcatctc actcacgcct ctgcaaataa caggagtagg tcatgctcta
     2041 accatttcaa ccatggctat tgcagcattg gttgagtcga aaagacttgc tatggcgcga
     2101 tcacacaacc ttgatggcaa ttcaattgtg ccaatgtctg tgttttggtt ggttccgcaa
     2161 ctagcacttg tgggtgcggc ggaagcgttt catttccctg ctcaagtgtc attgtactac
     2221 caagagtttc caaagtcact taaaagcatg gcggttgcaa tggtgggaac gtttgttggg
     2281 attgcgtttc ttttaggcac tgcagtggtt gatttccttc gtagaataac tggatggtta
     2341 cctaatggta tcaacgaagg gagaatagat aatgtgtatt gggttcttag tgttttcggg
     2401 ttgatcaact ttggatactt tctcttatgt tcgttgttgt ataagtgcca aaacgtcgca
     2461 aaggaagatc ttgatcgttc tagtccctct taggcgcgtt atgaatagtt acgaaatcac
     2521 tgctttcata cctaaagagg c
//
LOCUS       XM_071832306            1302 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842131), mRNA.
ACCESSION   XM_071832306
VERSION     XM_071832306.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1302
                     /gene="LOC139842131"
                     /note="uncharacterized LOC139842131; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139842131"
     CDS             1..1302
                     /gene="LOC139842131"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688407.1"
                     /db_xref="GeneID:139842131"
                     /translation="MYSLTAHVDHSSGLTLLERGQEFDSRGVQHCTQGCSFTLELHLR
                     VSSTHCVAGAVGRGVLLPMPSDWAKFLPGQQLWAVYATAGDERVANFKKLLLGFMIGL
                     LAWTYQSICPPPPKKLGSLNGPPITSPRIKLRDGRHLSYKEFGVPKEMAKYKVIFVHG
                     FDSFKHHNVIATSASPALIQDLGIYIVSFDRPGYGESDPDPNRTLKSSALDIEELADQ
                     LELGSKFYVVGFSMGGQIIWTCLKYIPHRLAGAALIAPAVNYWWPRLPTQLSKEAYSR
                     QYLQDQWCLSVAHYLPWLTYWWNTQKLFPSSSVISRSPEIFSRQDLELVPKFVTPKSI
                     EDQIRHQGEYESIHRDLNIGFGKWEFDPTEIENPFPNNEGSVHIWQGDEDILVPEILQ
                     RYIAQQLPWIKYHELKGAGHMFPFAEGISDAILKALLLGKS"
     misc_feature    403..1284
                     /gene="LOC139842131"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only]; Region:
                     MenH; COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 atgtacagcc ttacagctca tgtagaccac agtagtggtc tgactctctt agagagaggt
       61 caggagtttg actcccgtgg ggtgcagcat tgcacacaag gttgttcctt tacccttgaa
      121 ttacacctaa gggtgtcttc cacacattgc gttgcgggtg cagtggggag gggggtttta
      181 ctgccaatgc cctctgattg ggccaagttt cttcctgggc agcagttgtg ggcggtttat
      241 gcaactgcgg gagatgaacg cgtggctaat ttcaagaaat tgctactcgg cttcatgatt
      301 gggttactgg catggactta ccaatccatt tgtccacccc caccgaagaa acttggatct
      361 ctgaatggac ctcccattac gtcacctaga atcaagcttc gtgatggaag acatttatcc
      421 tataaagaat tcggtgtacc aaaagagatg gcgaaatata aagtgatatt tgtccatggc
      481 tttgattctt tcaaacatca caatgttatt gccacctcag cctctccggc tcttatccaa
      541 gatttgggaa tctacattgt ttcatttgat cgaccgggtt atggagagag cgatccggac
      601 ccaaaccgaa ctttaaagag ttcggctttg gatatagagg aacttgctga tcagctcgaa
      661 ctcggatcca aattctacgt agtcggtttc tctatgggtg gacaaatcat ttggacttgt
      721 ctcaagtaca tacctcacag gttagcagga gcagctctta tagctccggc agttaattat
      781 tggtggcctc gtttaccgac acagttatct aaagaagctt attccaggca ataccttcaa
      841 gaccaatggt gtctaagtgt tgctcactac cttccatggc tgacttactg gtggaatact
      901 caaaaactgt ttccttcttc tagtgttatt tctcgcagcc ccgaaatttt ctcacgccaa
      961 gacttggaac ttgtgcccaa gttcgtcact cctaaatcca ttgaggatca aataagacat
     1021 caaggtgaat acgaatccat ccatcgtgac ttgaatattg gatttggtaa gtgggaattt
     1081 gatccaacgg aaattgagaa tccatttcca aacaacgaag ggtcggttca tatatggcag
     1141 ggtgatgaag atatacttgt gcctgaaatc ctacaacgtt atatagccca acaacttcca
     1201 tggataaagt atcacgagct taagggtgct ggccacatgt tcccttttgc tgaagggata
     1261 agtgatgcta tccttaaagc gcttctactt ggtaaaagtt ag
//
LOCUS       XM_071832308             459 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842132), mRNA.
ACCESSION   XM_071832308
VERSION     XM_071832308.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..459
                     /gene="LOC139842132"
                     /note="uncharacterized LOC139842132; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842132"
     CDS             1..459
                     /gene="LOC139842132"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688409.1"
                     /db_xref="GeneID:139842132"
                     /translation="MEGILNFSANRLPKYFEWFHVRPDASGELGISTHLKQRAALRQL
                     AYGYTPDTLDEYLQMSERVARESLQNFMKCIVVLYANDYMREPTREDMDRLYEVHEEK
                     HDFPGMLGSIDCMHWVWGKCPVAWQGQFKKGDHSHPTIMLEAVASYDNWI"
     misc_feature    247..>456
                     /gene="LOC139842132"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggaaggta tattaaattt ttctgcaaat cgtttaccta aatattttga atggtttcat
       61 gttagacctg atgctagtgg cgagttaggc attagtacac atttaaaaca aagggccgca
      121 cttcgtcagt tggcatacgg ttatacaccc gatacgttag acgagtattt acaaatgtca
      181 gaacgtgtag ctcgtgaaag tttacaaaat tttatgaaat gtattgttgt tttatatgca
      241 aatgattata tgcgcgagcc tactcgtgag gacatggatc gtttatatga ggttcatgag
      301 gaaaagcatg actttcccgg catgctaggt agtatagatt gtatgcattg ggtttgggga
      361 aaatgtccgg ttgcatggca aggccaattt aagaaaggag atcatagtca tccaactatt
      421 atgcttgaag ccgttgcctc gtatgataat tggatatga
//
LOCUS       XM_071832309            1149 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842133), mRNA.
ACCESSION   XM_071832309
VERSION     XM_071832309.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1149
                     /gene="LOC139842133"
                     /note="uncharacterized LOC139842133; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842133"
     CDS             1..1149
                     /gene="LOC139842133"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688410.1"
                     /db_xref="GeneID:139842133"
                     /translation="MEVLSQKSTDVVQEAATVEEVETWMSPIVTYPNNGTLPVDGATA
                     RKNRMKAPMYMLRDGVLFKKSFTAPLLRCVGPVEVETIVMEVHEGTCGMHSGFRTVVG
                     KIMRLGYFWPSMYRDTKEIIKACASCQRHAPKIHMSAHELIHVTSAWPFYKWAIDLVG
                     PFPDGKHLVVAIDFFTKWVEAKPLKSTTGKQIVNFVWEKIVCHFGIPHEIVSDNSKQF
                     AHDPFRSWCDGLNIKQTFSSVAHPQANGQVKVTNKDIVAGIRARLDTDMKVQFNDESN
                     IISLKENLDLLEERRDAAAIREASNKQKIAKYYNQRVKERAFRPGDFVWHNNNAIRVE
                     NTVKLGPNWESPYVIADALGNRAYNLKTHDGKFVPRIWYATNLKKFYV"
     misc_feature    220..402
                     /gene="LOC139842133"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    <442..744
                     /gene="LOC139842133"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atggaggtcc ttagtcaaaa atccactgac gtggtacagg aagcagccac tgtagaagag
       61 gtcgagacgt ggatgagtcc tatcgttacg taccccaata acggaacgtt gccggtcgac
      121 ggggcaacgg cacgtaagaa tcgtatgaaa gcacctatgt acatgttaag ggatggagtt
      181 ctgttcaaga aatccttcac ggcaccactt ttaaggtgtg tcggcccagt cgaggtggaa
      241 acaatcgtaa tggaggtgca tgaagggact tgtggcatgc attcaggatt taggaccgtt
      301 gtggggaaga taatgcggct agggtatttt tggccgtcca tgtaccgtga cacgaaagag
      361 atcatcaaag cttgtgcttc atgccaacgt cacgccccga aaattcacat gtcggcgcat
      421 gagctaattc acgtgacatc tgcttggccc ttttacaaat gggcaattga tttggtaggc
      481 cccttcccgg atggaaaaca cttggtcgtt gcaattgact ttttcaccaa atgggttgaa
      541 gccaaacctt taaagagcac aacgggtaaa cagattgtga attttgtttg ggagaaaatc
      601 gtgtgccatt tcggaatacc acacgaaatt gtaagtgata acagcaaaca gtttgctcac
      661 gatccatttc gttcatggtg tgacgggttg aatatcaaac agactttcag ttctgttgcc
      721 catccgcagg caaatgggca agtcaaagtc accaacaagg atatcgttgc cgggataagg
      781 gcaaggttgg acacagacat gaaagtgcaa ttcaatgatg agtccaacat cattagcttg
      841 aaggaaaatt tggacttgtt ggaggaaagg cgtgacgccg ccgctatcag ggaagcgtca
      901 aacaaacaaa aaattgccaa gtattacaat caacgtgtga aggagcgtgc tttccgcccc
      961 ggtgattttg tgtggcataa taacaacgcc atccgggtcg agaatactgt aaaattggga
     1021 cctaattggg aaagcccgta tgtgattgca gatgcacttg gcaacagagc gtataactta
     1081 aagacgcatg acggcaaatt tgtgccgcgt atctggtacg caaccaattt aaagaagttt
     1141 tatgtttaa
//
LOCUS       XM_071832310            1536 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842134), mRNA.
ACCESSION   XM_071832310
VERSION     XM_071832310.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1536
                     /gene="LOC139842134"
                     /note="uncharacterized LOC139842134; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842134"
     CDS             1..1536
                     /gene="LOC139842134"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688411.1"
                     /db_xref="GeneID:139842134"
                     /translation="MLFWLTPDFKCKTPEEIDDIISAEIPSETEDPTAFKAVTDYMLH
                     GPCGGNILDAPCIIDKRCSKHFLKPYNAETTIDEEGYAHYRRRNNGLKVSKGKGTLDN
                     SFVVPYNRYLLLKYNAHINVEWCNRSQAIKYLFKYLNKGPDRATILIEENLAPVNTST
                     SEVVTEVDEIKKYLDCRYQSPCEAVWRMFSFEIHFSKPSVIKLSYHLPNHHTITLHDS
                     QNLPALLHRESIKETMFTDWLELNKRDPAARSLNYEKIPKHYVWNQDARTWTRRKQRT
                     CIGRIVYSHPASGERYYLRLLLNKVKGPETYKEIRTVDGILHPTFKDACFASGLINDD
                     REWTEAITEARLWASGAQLWDLFVTILLFCNVTKPLNLWVANWEALAEDILHKKRKLY
                     NFPDLTLSEAQLRNYCLLEIQSILNKNGKSLGDFPDLPQPDPTLLTQLDNRLIRKELN
                     YNLADLQAEHQTLYASLNPEQLNIYNEVISAVTQQAGVFFFSYMVPEVPGKLSSTRPF
                     LQS"
ORIGIN      
        1 atgttgtttt ggcttacacc agactttaag tgtaaaacac cggaagagat tgacgatatc
       61 atatctgctg aaataccatc tgaaacagaa gatccaaccg ctttcaaagc cgtaactgac
      121 tacatgctac atggcccgtg cggtgggaat atcctggacg ccccttgcat tattgataaa
      181 aggtgttcta agcatttcct gaaaccatac aacgcagaaa caacaataga cgaagaagga
      241 tatgcacact atcgtcgtcg aaataatggc ctaaaagtca gtaaaggaaa gggcaccctt
      301 gacaacagtt ttgtcgtacc ttacaatagg tatctccttc tcaaatacaa tgcacatata
      361 aatgtggagt ggtgtaatcg atctcaggcc attaagtact tatttaaata cttaaacaaa
      421 ggacctgatc gggcaactat attaattgaa gaaaacctag cccctgttaa cacctccact
      481 tcagaagtgg ttactgaggt ggatgaaatc aaaaaatatt tagactgtcg gtatcaatct
      541 ccgtgtgaag ctgtttggag aatgttttca ttcgaaattc acttctctaa gccatcggtt
      601 ataaagctgt catatcatct accaaatcac catacaatca cactacatga ttcacagaat
      661 ctccctgcac tgttgcatag ggagagtatc aaggaaacca tgttcaccga ctggcttgaa
      721 cttaacaaac gagaccccgc tgctcgaagc cttaattatg aaaaaatccc taagcattat
      781 gtttggaatc aggatgccag aacatggaca cgtcgaaaac agagaacctg cattggccgt
      841 atcgtctact cgcacccagc atcgggagaa cgttattatc tgaggttgtt gttaaataaa
      901 gtaaaaggcc ccgaaacata taaagaaata cgtacagttg atggaattct acatcccacg
      961 tttaaagatg catgtttcgc ctctgggttg atcaatgatg atagagagtg gacagaagct
     1021 ataactgaag ctaggttatg ggcatctggt gcacaactgt gggatctgtt tgtcacaatt
     1081 ctactttttt gcaacgtgac taaaccactc aacctttggg tagcaaattg ggaagctttg
     1141 gcagaagata tcctccacaa gaaacgcaaa ctatacaact tccctgattt gacgttgagt
     1201 gaggctcaac ttagaaatta ttgtttgttg gaaattcaaa gtatcttgaa caaaaatggt
     1261 aaatcgttag gagatttccc agatctacca caacctgacc ccacactctt aacacaactc
     1321 gacaatcgtc taattcgcaa agaattgaac tacaatctag cagatttgca agctgaacat
     1381 caaaccctct acgcgtcact caacccagaa caacttaaca tttacaatga ggtgatttca
     1441 gcagtaacac aacaagcggg ggtttttttc ttttcttata tggtcccgga ggtaccggga
     1501 aaactttcgt ctacaagacc attcttgcaa agctaa
//
LOCUS       XM_071832311            1443 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides replication protein A 70 kDa
            DNA-binding subunit B-like (LOC139842135), mRNA.
ACCESSION   XM_071832311
VERSION     XM_071832311.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1443
                     /gene="LOC139842135"
                     /note="replication protein A 70 kDa DNA-binding subunit
                     B-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139842135"
     CDS             1..1443
                     /gene="LOC139842135"
                     /codon_start=1
                     /product="replication protein A 70 kDa DNA-binding subunit
                     B-like"
                     /protein_id="XP_071688412.1"
                     /db_xref="GeneID:139842135"
                     /translation="MALATQNDTVQANERTYSYLHELQVGKEAEGNVIQLTARSTVAH
                     CFISRLKEGSVYLLNKFEVIPNKDDYRLLRNNKVLIQLQGSTFLKKISGDEHSGFIRH
                     PYACIPFEDLEPNGGKYQIDVVGCVLNFGSVTPQKGGSTTLEFQLVNERHRRVRVTLW
                     GKLGDSFLARKPTVTSQDSIILSSVSVRKDYYGETFLSSTSATLIIDDAQVPTLANFI
                     NKISAMEFADDMGELAPQRQLPPPKEGSIVDLLTMARRGKNNVADVFKCTVELTNVRM
                     KNSWFYNSCGICKAKKSISRQDGGFWCESCEKRFPSRLQGCYYPFLPFDVRDSTAETV
                     VVMFDETAEQLTGTTAQSLLDAQDAVTCTTVLPNPLANLLNTTQVLLLKVNSYYEHGT
                     YESFNCIKVYSDEDDSAPAVSDNLDPGVFPPAVKPGAASTVPPVATPKGVKRTIEIPT
                     PIKELELPSHRKFIVTTSDSEEDTGAVTVT"
     misc_feature    <88..1074
                     /gene="LOC139842135"
                     /note="replication factor-a protein 1 (rpa1); Region:
                     rpa1; TIGR00617"
                     /db_xref="CDD:273177"
ORIGIN      
        1 atggctcttg caactcaaaa cgacaccgtc caagctaacg aacgcaccta ttcatacctt
       61 catgagctcc aggttggtaa ggaggcggag ggtaatgtta ttcagctaac tgccaggagc
      121 actgtagctc actgttttat ttcaaggtta aaagaaggat cagtttactt gctcaacaaa
      181 ttcgaggtca tccccaataa ggacgattac cgcctcttgc gaaataacaa ggtgcttatt
      241 cagttacaag gctcgacctt cctcaagaaa atatcaggtg atgagcattc aggttttatc
      301 cgccacccat acgcttgcat tccatttgaa gacttggaac caaatggtgg aaaataccaa
      361 atagatgttg tggggtgtgt tctaaatttc gggtcagtta cgccccaaaa aggcgggtct
      421 acgacactcg agtttcaact ggtcaatgag agacatcggc gagttcgtgt caccctttgg
      481 gggaaattgg gtgactcttt ccttgctagg aagcccactg tcacatcaca ggatagcatc
      541 attttatcat cagtttctgt tagaaaggac tactatgggg agacatttct ctcaagcacg
      601 tcagccactt tgataattga cgacgctcaa gtaccgacct tggctaattt tatcaacaaa
      661 atcagtgcca tggaatttgc tgatgacatg ggagaattgg ctcctcagcg gcaactcccg
      721 ccaccaaaag aaggttccat cgttgacctc ctaacaatgg cccgcagagg caaaaacaat
      781 gttgccgacg tgttcaagtg caccgtggag ctaaccaatg tgaggatgaa aaacagctgg
      841 ttttacaata gttgtggtat ttgcaaggct aagaagagca tatcgagaca ggatggagga
      901 ttttggtgtg aatcgtgcga aaaaaggttc ccgagccgct tacaaggttg ttactatcca
      961 tttttacctt ttgatgtgag ggactcgacc gctgaaaccg tcgtggtcat gtttgatgaa
     1021 acagctgagc agttgactgg gacaaccgct caatccctct tggatgctca ggatgcggta
     1081 acctgcacca ccgttttacc taatccactt gctaatctgc ttaatacaac ccaagtgcta
     1141 cttttgaagg tcaactctta ctatgaacat ggaacatacg aaagttttaa ttgcataaaa
     1201 gtatactcgg acgaagatga ctccgcaccg gcggtgtccg acaatttgga tcccggtgtg
     1261 tttcctccag ctgttaaacc aggtgctgcg tcaaccgttc cgccagttgc aacacccaaa
     1321 ggggttaaga gaacaattga aatccccact ccgataaagg aattggaact ccctagccac
     1381 cgcaagttta ttgtcacaac ctctgactca gaagaagaca cgggtgcggt tacagttacc
     1441 tag
//
LOCUS       XM_071832312             666 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842137), mRNA.
ACCESSION   XM_071832312
VERSION     XM_071832312.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..666
                     /gene="LOC139842137"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139842137"
     CDS             1..666
                     /gene="LOC139842137"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688413.1"
                     /db_xref="GeneID:139842137"
                     /translation="MKDLGTLSYFLGISVTANEHGLFLSQQTYAQDILTRAGMKDCNT
                     VKTPVDTNQKLSSSAGSSYANPTKYRSLAGALQYLTFTRPDISYAVQQVCLHMHDPKY
                     CHMQALRRILRYIHGTLTLGLQITKGSLSSLVSYTNVDWGGCSDTRRSTSGYCVFLEN
                     NLISWSAKRQPTVSRSSAEAEYRGVAKIVLESCWLHDLLLEPYCGSGTSSRSAHSYTV
                     STS"
     misc_feature    <1..147
                     /gene="LOC139842137"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    406..>603
                     /gene="LOC139842137"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaggatc ttggtactct aagctatttc ttggggatat ctgttacagc aaacgaacac
       61 ggcttatttt tgagtcaaca aacatatgct caagacattt tgacacgtgc aggtatgaaa
      121 gattgtaata cggtcaagac tccggttgat actaatcaga aactaagctc atcagcaggt
      181 tcatcatatg caaatccaac caaataccga agtctcgcgg gagccttaca atacttgaca
      241 ttcactcgcc ccgacatatc atatgctgtt caacaagtat gtttgcatat gcacgatccg
      301 aaatattgtc acatgcaagc acttcgcaga atattacgat atattcacgg cactctcact
      361 ctcggtttac agatcacaaa aggctccctc tcatctctcg tctcttacac gaatgtggat
      421 tggggtggat gttcggatac acgacgatcc acctctggtt attgtgtttt tcttgagaat
      481 aatttaatat catggtccgc taaacgacaa cccactgttt cacggtcaag tgcagaagct
      541 gaatatcgcg gtgtagcaaa gattgtttta gagtcttgtt ggcttcatga tcttttgcta
      601 gaaccatatt gtggctcggg gacaagttcg cgttctgcac attcctacac ggtttcaact
      661 agctga
//
LOCUS       XM_071832313             324 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842138), mRNA.
ACCESSION   XM_071832313
VERSION     XM_071832313.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..324
                     /gene="LOC139842138"
                     /note="uncharacterized LOC139842138; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842138"
     CDS             1..324
                     /gene="LOC139842138"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688414.1"
                     /db_xref="GeneID:139842138"
                     /translation="MTDKQRYHLALTISNIKNMIPITLELDNSQYTSWSRLFKIHCQA
                     YDVLDHIIPPTTGSSDSTTTNTDPQNPLWPRLDAIILQWIYGTISQELMNTILEQEET
                     TVAAA"
ORIGIN      
        1 atgactgata aacaacgtta tcatctggca ctcaccatct ccaacatcaa aaacatgatc
       61 ccaattaccc tagagcttga caacagccaa tacacttctt ggtctcgcct gttcaagatc
      121 cattgtcaag cctatgatgt gcttgatcac atcattccac caacaaccgg atcttctgac
      181 tctaccacca ccaacactga tccacagaat ccactttggc cacgccttga tgccatcatc
      241 ttacaatgga tctatggtac catatcacaa gaattaatga atacaattct tgaacaagaa
      301 gaaacaactg ttgctgctgc ctga
//
LOCUS       XM_071832314             975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g23880-like (LOC139842139), mRNA.
ACCESSION   XM_071832314
VERSION     XM_071832314.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..975
                     /gene="LOC139842139"
                     /note="F-box/kelch-repeat protein At3g23880-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 42 Proteins"
                     /db_xref="GeneID:139842139"
     CDS             1..975
                     /gene="LOC139842139"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g23880-like"
                     /protein_id="XP_071688415.1"
                     /db_xref="GeneID:139842139"
                     /translation="MSDYVPFEIQIEIMSRLPVKSLIQFTSVSKTWRSLINSSKFIGD
                     YTKLHSQRQHLLLRYYYPLHAKHNSFVSIVDDDTFPENKLFLASYDYREVRRYPTLVG
                     SSHGLFCFVGHSDSNKSAMLMDVAVIWNPSIRKTVTIRLQKGFGYNETVGCGVCPNTL
                     EPKIVRLYKDNYNAEVFTLSSMMWRCLPSSNIMLSKKIYIISFIQSNVVIDGFIYWLA
                     YVRSGPFIIVLFDLSMEEFMEIHLPDELGLSRLSDDYINLEIFKLRESLTVIRYEGKA
                     RENVYEVWKMEINGVTRSFTKLFNINGPNLLLRSVVLIAYWPSISSTE"
     misc_feature    7..123
                     /gene="LOC139842139"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(13..15,25..27,34..39,46..51,61..63,67..72,82..90,
                     94..96)
                     /gene="LOC139842139"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    313..918
                     /gene="LOC139842139"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgtcagact atgtaccttt tgaaatacaa atcgagatca tgagccggct tccagttaaa
       61 tcattaattc aattcacatc agtttcaaaa acatggaggt ctttaataaa tagctcaaag
      121 tttattggtg attacaccaa gcttcattct cagcggcaac atcttctttt aaggtattac
      181 taccctttac atgctaagca taatagtttt gtttcgattg ttgatgatga tactttccca
      241 gaaaataagc tttttttggc aagttatgat taccgtgagg tacgtcggta tccaactctg
      301 gttggtagct cacatgggct gttttgtttt gtgggtcata gtgattctaa taaatctgct
      361 atgttaatgg atgtggctgt catttggaat ccttcaataa gaaaaacagt taccattcgt
      421 ctgcaaaaag gttttggata taatgagact gtaggttgtg gggtttgtcc aaacacactt
      481 gaacctaaga tagtacggct ttataaagat aactacaatg ctgaggtttt tacattaagt
      541 tcaatgatgt ggaggtgtct accatcaagt aacattatgc ttagtaagaa gatttatata
      601 ataagcttta ttcaatccaa cgtagttata gatgggttta tctattggct tgcatacgta
      661 agatctggtc catttatcat tgttttattt gatttgtcaa tggaagaatt tatggaaata
      721 cacctcccag atgaattagg gttatcacgt ctctctgacg actacattaa tttagaaata
      781 ttcaagctta gggagtctct taccgtgatt cgatatgaag ggaaggccag ggaaaatgtt
      841 tatgaagtgt ggaagatgga gattaatggt gtaacaagat cgtttaccaa actattcaac
      901 atcaatggcc caaacttatt gttgagatca gtggtcttga ttgcttactg gccttctata
      961 tcttccactg agtaa
//
LOCUS       XM_071832315             351 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At1g30790-like
            (LOC139842140), mRNA.
ACCESSION   XM_071832315
VERSION     XM_071832315.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..351
                     /gene="LOC139842140"
                     /note="F-box protein At1g30790-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842140"
     CDS             1..351
                     /gene="LOC139842140"
                     /codon_start=1
                     /product="F-box protein At1g30790-like"
                     /protein_id="XP_071688416.1"
                     /db_xref="GeneID:139842140"
                     /translation="MSDHVPFDIHIEIMKRLPVKSLIRFSSVSKRWKSLINSSKFIAD
                     YTKLHSQRQHLLIKYMNHSSYPQQICFVSIVDDDTFPEHRLIMTTPNSLILEKLEPVG
                     SSDCSVLSANFVVI"
     misc_feature    16..123
                     /gene="LOC139842140"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(25..27,34..39,46..51,61..63,67..72,82..90,94..96)
                     /gene="LOC139842140"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
ORIGIN      
        1 atgtctgatc acgtaccctt tgatatacac atcgagatca tgaaacggct tcctgttaaa
       61 tcattgattc gattcagttc agtttcaaaa agatggaagt ctttaataaa tagctcaaag
      121 tttattgctg attacaccaa gctccattct cagcggcagc atcttcttat aaagtacatg
      181 aatcattctt catatcctca acaaatttgt tttgtttcga ttgttgatga tgatactttc
      241 cccgaacaca ggcttattat gacaactccc aactccctta ttcttgagaa attagaacca
      301 gttggtagct cggattgttc tgttttgtcg gccaattttg tagtaatcta a
//
LOCUS       XM_071832316            1083 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g23880-like (LOC139842141), mRNA.
ACCESSION   XM_071832316
VERSION     XM_071832316.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1083
                     /gene="LOC139842141"
                     /note="F-box/kelch-repeat protein At3g23880-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 42 Proteins"
                     /db_xref="GeneID:139842141"
     CDS             1..1083
                     /gene="LOC139842141"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g23880-like"
                     /protein_id="XP_071688417.1"
                     /db_xref="GeneID:139842141"
                     /translation="MLDHVPFEILIEIMTRLPVKSLIQFTSVLKTWKSLIRSSKFIAD
                     YYTNLRSQRQHLIQYNHHSHYQQNCFVSIVDDNTFPEHQLTLTTPSSLSLDNLALVGS
                     SHGLFCFVARKGTNILSKVVVIWNPSIRKSVAIYVHNDIKEDEDCFLGFGVCPNTLDP
                     KIIKICKFDGNLEVVVFTLSSRTWRSPLSNIMLSNNLTITSPYSNIVIGGLIYWCALK
                     SFLYTIVSFDLTSEEFVEIQLPDELKLSYQMDSRIFKLRESLVVVQQHMNNDYQVWIM
                     ENKVTKSFTKLFNINILPDLSVIKPCGFRMNDQLILESSCHLVAYDPSTESIKNLGFD
                     GRINSFDVTSYTESLLLIDNSESLIY"
     misc_feature    16..123
                     /gene="LOC139842141"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(25..27,34..39,46..51,61..63,67..72,82..90,94..96)
                     /gene="LOC139842141"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    310..948
                     /gene="LOC139842141"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgttagatc acgtaccttt tgaaatacta atcgagatca tgacccggct tcctgttaaa
       61 tcattaattc aattcacatc agttttaaaa acatggaagt ctttaatccg tagctcaaag
      121 tttattgctg attattacac caatcttcgg tctcagcggc aacatcttat acagtacaat
      181 catcattcac attatcagca aaattgtttt gtttcgattg ttgatgataa tactttcccc
      241 gaacaccagc ttactttgac aactcccagt tccctcagtc ttgataattt ggcgctagtt
      301 ggcagctcgc atggactgtt ctgttttgtc gcccgaaaag gtactaatat actatcgaag
      361 gtggttgtta tttggaatcc ttcaataaga aaatctgttg ccatttatgt gcataatgat
      421 attaaagaag atgaagattg ttttcttggt tttggggttt gtccaaacac actcgacccg
      481 aagataatca agatttgtaa atttgatggc aaccttgaag ttgtggtttt tacattaagt
      541 tcaaggacgt ggaggagtcc attaagtaat attatgctta gtaataacct tactataaca
      601 agcccttact ctaatatagt tataggtggg ttaatttatt ggtgtgcact taagagtttt
      661 ctttatacga ttgtttcgtt tgatttgaca agtgaagaat ttgtggagat acaattgccg
      721 gacgaattaa agttatcata tcaaatggat tcacgaatat tcaagcttag ggagtctctt
      781 gttgtggttc aacaacacat gaacaatgat tatcaagtgt ggataatgga gaacaaagta
      841 acaaaatcgt ttaccaagct attcaacatc aacatattac cagatttatc ggtgataaaa
      901 ccttgtggat ttaggatgaa tgaccaactt atattggaaa gttcatgtca cctggtagcc
      961 tatgaccctt ccacagaaag catcaaaaat ctcgggttcg atggaagaat taattcattt
     1021 gatgtgactt cctatacgga atcgctacta ctaattgata actctgaatc attaatatat
     1081 tga
//
LOCUS       XM_071832317            1116 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
            (LOC139842143), mRNA.
ACCESSION   XM_071832317
VERSION     XM_071832317.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1116
                     /gene="LOC139842143"
                     /note="1-aminocyclopropane-1-carboxylate oxidase homolog
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 23 Proteins"
                     /db_xref="GeneID:139842143"
     CDS             1..1116
                     /gene="LOC139842143"
                     /codon_start=1
                     /product="1-aminocyclopropane-1-carboxylate oxidase
                     homolog 1-like"
                     /protein_id="XP_071688418.1"
                     /db_xref="GeneID:139842143"
                     /translation="MGLINTGPGITRPEYDRKTELIAFDQTKTGVKGLVDSGITQVPR
                     IFHLPYPENINSDQTSGSKPTLPTIDLEGINEDSIKRNEVIEKLKNALENWGFFQVVN
                     HGIPIDILEDVKKGILGFFEQDTDVKKQWYSRDVSGKSRVLYNSNFDLYSAPVTNWRD
                     SFYCIMAPDPPQPHELPLPCRDIWPEYSNRMMKLGCCVFELISEALGLDPNHLFDMGC
                     VEGLALLAHYYPSCPQPELTIGTPNHTDNDFITILLQDHVGGLQVFYENQWIDVPPIP
                     GALVVNVGDLLQLITNDKFVSSQHKVLANKIGPRVSLASFFTTGIIPTMKVFEPIKEL
                     VSEDNPAKYRGTTVKEYGNYYREKGLDGTSALLHFRI"
     misc_feature    91..1092
                     /gene="LOC139842143"
                     /note="leucoanthocyanidin dioxygenase like protein;
                     Region: PLN02393"
                     /db_xref="CDD:215220"
ORIGIN      
        1 atgggtctga tcaataccgg tccgggaata accagaccgg aatacgaccg taaaaccgag
       61 ctaatagcat tcgaccaaac caaaaccgga gtcaaaggac tcgttgattc cggaatcaca
      121 caagtccctc gtatattcca cttaccttat cccgaaaaca tcaattccga ccaaacatca
      181 gggtcaaaac caactcttcc gaccattgat ctggaaggaa tcaacgagga ttcaatcaag
      241 cgaaatgaag tgatcgagaa attgaaaaat gcgttggaga attggggatt ttttcaagtt
      301 gtgaaccatg gaataccaat tgacattttg gaggatgtga aaaagggtat tttagggttt
      361 tttgaacaag atacagatgt gaagaagcag tggtactcaa gagatgttag tgggaagagt
      421 agggtgttgt ataacagtaa cttcgatttg tactcggcac cggtgactaa ttggcgtgac
      481 tcgttttatt gtatcatggc tcctgatcca cctcaaccac atgagttacc gttgccttgc
      541 agagatatat ggccagagta ctcgaaccgc atgatgaagc ttggatgttg tgtgttcgag
      601 ttaatatctg aggctcttgg gctcgaccct aatcatcttt ttgacatggg gtgtgttgaa
      661 ggacttgctc ttcttgccca ttattatcca tcatgtccac aacctgagtt aacaatcgga
      721 acccctaatc ataccgacaa cgatttcatc acgattcttt tgcaagacca tgttggtggc
      781 cttcaagtgt tttacgaaaa tcaatggata gacgttcctc cgatcccagg agcactcgta
      841 gtgaacgttg gtgatcttct acagttgatt acaaatgata aatttgttag ctcgcaacat
      901 aaagtgttgg cgaataagat cggcccaaga gtatcattgg cgtcgttctt tacaacaggc
      961 attattccaa ccatgaaggt gtttgaaccg atcaaggagt tggtttcaga agataacccc
     1021 gccaagtata gaggcacaac ggtgaaagaa tatggaaact actataggga aaaaggactt
     1081 gatggcactt ctgccctttt gcattttagg atctag
//
LOCUS       XM_071832318            1098 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842144), mRNA.
ACCESSION   XM_071832318
VERSION     XM_071832318.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1098
                     /gene="LOC139842144"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139842144"
     CDS             1..1098
                     /gene="LOC139842144"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688419.1"
                     /db_xref="GeneID:139842144"
                     /translation="MVTVRLLLAVSAMYNWDISQMDVSNAFLHGDLLEEVYMKMPLGM
                     QLKDQLKSQFHMKDLGSVSYFLGLDVSRSAQGVFVSQQKYTMDLLKKNGVLNCRPYKL
                     PLDPNIKLQADLGTPLKDPELYRRLIGKLIYLTITRPAICYSVQLLSQFMQSPTSVHH
                     QAAIHLLRYLLLAPAQGILLANKSTVELNAYCDSDWASCPMTRRLTTGYCILLGDSPM
                     SWKSKRQSVVSRSSAEAEYRAMALTCCEVTWLVSLLKDLGLKDLGPVDMYCDNQAAIH
                     IAANPVFRARTKHIEVDCHFIRDQVKKGVIKPQYVHTKFQLADVFTKIVTVDQHNKLL
                     SKLGVKDHSQLEGEYARDTGQKQKSTRCQYK"
     misc_feature    <7..312
                     /gene="LOC139842144"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    568..969
                     /gene="LOC139842144"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(577..588,691..699,706..708,808..810,886..888,
                     967..969)
                     /gene="LOC139842144"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggtcactg taagattgtt gcttgcagtt tcagctatgt acaactggga tatctcacaa
       61 atggatgtct caaatgcatt tcttcatgga gatttattgg aagaagtata tatgaagatg
      121 ccactgggta tgcagcttaa agatcagtta aagtcccaat ttcatatgaa ggaccttgga
      181 agtgttagct atttcttggg tttagatgtc tctagatcag ctcaaggtgt gtttgtttct
      241 cagcaaaagt acacaatgga tttgttaaag aaaaatggtg ttttaaattg tagaccatat
      301 aagctacctt tagatcctaa tataaaatta caagctgatt tgggaacacc tttgaaggat
      361 ccagagttat ataggaggtt aattgggaag ctcatatatc tgactatcac aagacctgcc
      421 atatgttaca gtgttcaact cttaagtcaa ttcatgcaat caccaacttc tgtacatcat
      481 caggctgcta tacatcttct aagatactta ttgttagctc ctgcacaggg tattttgttg
      541 gcaaacaaat ctacagttga attgaacgct tattgtgatt cggattgggc tagttgtcca
      601 atgactagac gattaacaac aggctactgc atactgttag gtgattctcc aatgtcttgg
      661 aaatcaaaga gacagagtgt tgtttctaga tcatctgcag aggcagagta cagggcaatg
      721 gccttaacct gctgtgaagt tacttggtta gttagtcttt tgaaggatct tggtttaaaa
      781 gatttgggtc cagttgatat gtactgtgat aaccaagcag caattcacat agctgccaat
      841 ccagtttttc gtgctcgaac aaagcatatt gaggtggatt gtcatttcat tagagatcaa
      901 gtcaagaaag gagtaattaa accacaatat gttcatacaa aatttcaatt agctgatgtc
      961 tttaccaaaa ttgttactgt agatcaacac aataaacttc taagcaaatt gggagttaaa
     1021 gatcactcac aacttgaggg ggagtatgca agggatactg gtcaaaaaca aaagtcaacc
     1081 aggtgtcaat ataaatga
//
LOCUS       XM_071832319            1023 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g50870 (LOC139842145), mRNA.
ACCESSION   XM_071832319
VERSION     XM_071832319.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1023
                     /gene="LOC139842145"
                     /note="putative F-box protein At1g50870; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842145"
     CDS             1..1023
                     /gene="LOC139842145"
                     /codon_start=1
                     /product="putative F-box protein At1g50870"
                     /protein_id="XP_071688420.1"
                     /db_xref="GeneID:139842145"
                     /translation="MSYHVPFKIEFEIMIRLPVKSLIRFSSVSKTWKSLINSLKFIAD
                     YTNLHSQRQHILIRYKYPSHAPQKNFVSIVDDDDTFREHKLCFTTYVCFEVWYPKLVG
                     SSHGLFCFLGHSKEFTIRMDVAVIWNPSIRKTVVIHLKKGFGYNETVGFGVCPNTLDP
                     KIVRICKDNYNAEVFTLNSRMEEFMEIHFPDELGLSRISDYNLQISKLRESLTVIRHK
                     MGTRKIVYEVWKMENIGVTRSFTKLYNINISPKLLLGNLCGFNKNGQLIVEAVHDSCK
                     GSCNSELIVYDPCTKNISNLGIYWIDYGSSESTPYTESLLLLDKPYIVIFDGAFLDED
                     QNRPGL"
     misc_feature    16..123
                     /gene="LOC139842145"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(16..18,22..30,37..42,49..51,82..90,94..96,103..105)
                     /gene="LOC139842145"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(25..27,34..39,46..51,61..63,67..72,82..90,94..96)
                     /gene="LOC139842145"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    313..>537
                     /gene="LOC139842145"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgtcatacc atgtaccttt taaaatagaa ttcgagatca tgatccggct tcctgttaaa
       61 tcattgattc gattcagttc agtttcaaaa acatggaagt ctttaatcaa tagcttaaag
      121 tttattgctg attacaccaa cctccattct cagcggcaac atattcttat aaggtataaa
      181 tatccttcac atgctccgca aaagaatttt gtttcgattg ttgatgatga tgatactttc
      241 cgcgaacata agctttgttt taccacttat gtgtgttttg aggtttggta tccaaagcta
      301 gttggtagct cacatgggct gttttgtttt ctgggtcata gtaaagaatt tacaattaga
      361 atggatgtgg ctgtaatttg gaatccttca ataagaaaaa cagttgtcat tcatctgaaa
      421 aaaggttttg gatataatga gactgtaggt ttcggggttt gtccaaacac acttgaccct
      481 aagatagtac gaatttgtaa agataactac aatgctgagg tttttacatt aaattcaagg
      541 atggaggagt ttatggaaat acacttcccg gatgaattag ggttatcacg tatctctgat
      601 tacaatttac aaatatcaaa gcttagggag tctcttaccg tgattcgtca taaaatgggg
      661 accaggaaaa tcgtttatga agtgtggaag atggagaata ttggtgtaac aagatccttt
      721 accaagcttt ataacatcaa catatcacca aaattattgt tggggaacct atgcggattt
      781 aataagaatg gccaacttat cgtagaagcg gttcatgact catgtaaagg ttcatgcaac
      841 agcgagctta tagtttatga tccctgcaca aaaaacatca gcaatcttgg aatttactgg
      901 atcgattatg ggtcttcaga gagtactccc tatacagaat cattattgtt acttgataaa
      961 ccatatatag taatatttga tggcgcattt cttgatgaag atcagaaccg accaggtttg
     1021 taa
//
LOCUS       XM_071832320            1155 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g32420 (LOC139842146), mRNA.
ACCESSION   XM_071832320
VERSION     XM_071832320.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1155
                     /gene="LOC139842146"
                     /note="putative F-box protein At1g32420; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins"
                     /db_xref="GeneID:139842146"
     CDS             1..1155
                     /gene="LOC139842146"
                     /codon_start=1
                     /product="putative F-box protein At1g32420"
                     /protein_id="XP_071688421.1"
                     /db_xref="GeneID:139842146"
                     /translation="MSDHIPFEIQIEIMSWLPVKSLIRFGSVSKTFKSLIGSSKFIAD
                     YSKLQYSRRQHLLIISYQYPLYAKHNSFVSIVDDDTFPEHKRFLITSECREVLPYQTL
                     IGSSHGLFCFVGHSRYNESAMLMAVAVIWNPSIRKTVTIRPKKGFQYSETLGFGVCPN
                     TVDPKIVRFGKGSCKDNYNAEVFTLSSRMWRSISSSNILLSMHINISFIQSNVVVIDG
                     FIYWLGYVTSGPFLIVSFDLTSEKLMEIHLPDELGLSCQRYHNLEIFKLRESLTVIRH
                     EGKARDNVYEVWKMEINGVTRSFTKLFNIDILPELLVRNLCGFTKNGQLIVEAVHDSC
                     DGELIVYEPCTKSIINLGINWSCYGSSESTPYTESLLLMLVDKPYTLIYT"
     misc_feature    13..123
                     /gene="LOC139842146"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(13..18,22..30,37..42,49..51,82..90,94..96,103..105)
                     /gene="LOC139842146"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(13..15,25..27,34..39,46..51,61..63,67..72,82..90,
                     94..96)
                     /gene="LOC139842146"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
     misc_feature    319..981
                     /gene="LOC139842146"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgtcagatc acataccttt tgaaatacaa attgagatca tgtcatggct tcctgttaaa
       61 tcgttgattc gattcggatc agtttcaaaa acattcaagt ctttaatcgg tagttcaaag
      121 tttattgctg attactccaa gctccaatat tctcggcggc aacatcttct tattataagt
      181 tatcaatacc ctttatatgc taagcataac agtttcgttt cgattgttga tgacgatact
      241 ttccccgaac ataagcgttt tttgataact tccgagtgcc gtgaggtact tccatatcaa
      301 actctaattg gtagctcaca tgggctgttt tgttttgtgg gtcatagtag atataatgaa
      361 tctgcaatgt tgatggctgt ggctgtcatt tggaatcctt caataagaaa aacggttacc
      421 attcgtccga aaaaaggttt tcaatatagt gagactttag gtttcggggt ttgtccaaac
      481 acagttgacc ctaagatagt acggtttggt aaaggtagtt gtaaagataa ctacaatgct
      541 gaagttttta cattaagttc aaggatgtgg aggagtatat catcaagtaa cattttgctt
      601 agtatgcaca taaatataag ctttattcaa tcaaacgtag tagttataga cgggtttatt
      661 tattggcttg ggtacgtaac aagtggtcca tttttaattg tttcatttga tttgacaagt
      721 gaaaaattaa tggaaataca cctcccggat gaattagggt tatcgtgtca gcgctatcac
      781 aatttagaaa tattcaagct tagggagtct cttaccgtga ttcgacatga agggaaggcc
      841 agggacaatg tttatgaagt gtggaagatg gagattaatg gtgtaacaag atcgtttacc
      901 aagcttttca acattgacat attaccagaa ttattggtga ggaacctatg cggatttaca
      961 aagaatggcc aacttatagt agaagcggtt catgactcat gcgatggcga gcttatagtt
     1021 tatgaaccct gcacaaaaag catcatcaat cttgggatta actggagctg ttatgggtct
     1081 tcagagagta ctccctatac ggaatcacta ctgctaatgt tggttgataa accatataca
     1141 ctaatatata cttga
//
LOCUS       XM_071832321            1239 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842147), mRNA.
ACCESSION   XM_071832321
VERSION     XM_071832321.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1239
                     /gene="LOC139842147"
                     /note="uncharacterized LOC139842147; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842147"
     CDS             1..1239
                     /gene="LOC139842147"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688422.1"
                     /db_xref="GeneID:139842147"
                     /translation="MAKVQNSISPKQHLIACNLKPNQDPKRKTIESIEPGTDVDQKKD
                     NAAIAYLYQSLPEDLILQVAGCTHAKEIWDAIKTRHLGVERVMEARLQTLKAEFEAAR
                     MKDSEKIDDFAAKLSGIASKSAALGTVIEETTLVRKILTAILEKFLNMAATIEQLVDL
                     KTVKFQEVVGRLKAYEERTSLKTTNNSHDQLLLSYEGWDSRKKRENSFGQGRGNGQDT
                     RGRGRRRGQFGGRGRGSGRGQNFLLKREQANLTQARSTELPVANDDRPALLISIAKQR
                     SEKEVIHLSEKKVFPAKYESHDGRENMWFMWSFMLKTKGEAFEQFKKFKAIAENQYGR
                     KIKVLRTDRGGEFTSNEFNQYCDYAGITRHLTAPYTPQQNGIVERRNRTVMSTTRSIL
                     KAMDMPQSCWAEAVRHSVYY"
     misc_feature    145..534
                     /gene="LOC139842147"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    <973..1152
                     /gene="LOC139842147"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atggcaaagg tacaaaactc catatcacca aagcaacatc taatagcctg taacttgaag
       61 cctaaccagg acccaaaaag gaaaacgatt gaatcaattg aacctggaac tgatgtcgat
      121 cagaaaaagg ataatgctgc aatcgcttat ctgtatcagt ctttacctga agacttgatt
      181 cttcaagttg caggttgcac ccatgcaaag gaaatctggg atgcaatcaa gacccgtcac
      241 cttggagttg aacgagtaat ggaggctagg cttcaaactc ttaaagctga atttgaagca
      301 gcacggatga aagatagcga aaaaattgat gattttgcag caaaactttc tggaattgcc
      361 tcaaaatcag ctgcacttgg aaccgtcatt gaggaaacca cgttggtgag aaaaatatta
      421 actgccatac tagaaaaatt cttaaatatg gcagccacta tcgaacaact ggttgatctc
      481 aaaacggtga aatttcagga agttgtgggt aggctaaaag cttatgaaga acgaaccagt
      541 ctaaagacta caaataacag ccatgaccaa cttctgttgt cctatgaagg atgggactca
      601 agaaagaaaa gggaaaacag ctttggtcaa ggtcgaggga atggccaaga cacccggggt
      661 aggggccgac gtcgtggaca gtttggtggt cgaggaaggg gttcaggccg cggacaaaac
      721 tttttgctga aaagagaaca agcaaatttg actcaagcta gatcaactga actaccagtg
      781 gctaatgatg acagacctgc actattgata tccatagcca agcaaagaag cgagaaggaa
      841 gtaattcatc taagtgaaaa gaaggttttt ccagcaaagt atgagtcaca tgatggtaga
      901 gaaaacatgt ggtttatgtg gtctttcatg ttaaaaacca aaggagaggc atttgagcaa
      961 ttcaagaaat tcaaggcgat tgctgaaaat caatatggaa ggaaaataaa ggtccttaga
     1021 actgatcggg gaggagaatt tacatccaac gagttcaatc agtattgtga ttatgctgga
     1081 atcacaagac atttgactgc accttacacg ccacagcaga atggtatcgt tgaaaggcga
     1141 aatcgaacag tgatgagcac aacaaggagt attcttaaag caatggatat gccacaaagt
     1201 tgttgggctg aagcagtacg tcactcggtt tattattaa
//
LOCUS       XM_071832322             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g47790 (LOC139842148), mRNA.
ACCESSION   XM_071832322
VERSION     XM_071832322.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139842148"
                     /note="putative F-box protein At1g47790; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842148"
     CDS             1..498
                     /gene="LOC139842148"
                     /codon_start=1
                     /product="putative F-box protein At1g47790"
                     /protein_id="XP_071688423.1"
                     /db_xref="GeneID:139842148"
                     /translation="MSDHIPFDLQIAIMLWLPIKSLYRFKSVSKTWKFLIASPKFIAD
                     YTKLHSHRQHLLIQYNHPLYYHQNCFISIVDDDTFPEHKRFLTTPDSLSLDKLALVGS
                     SHGLFYFVGRRDTTITLKVVVIWNPSINKSVVVPLHNVKKDGEHYKDFFFLLSGFVQT
                     DMTRR"
     misc_feature    13..123
                     /gene="LOC139842148"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(13..18,22..30,37..42,49..51,82..90,94..96,103..105)
                     /gene="LOC139842148"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(13..15,25..27,34..39,46..51,61..63,67..72,82..90,
                     94..96)
                     /gene="LOC139842148"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
ORIGIN      
        1 atgtctgatc acataccttt tgatttacaa atcgcgatca tgttatggct tcctattaaa
       61 tcattgtatc gattcaaatc agtttcaaaa acatggaagt ttttaatcgc tagcccaaag
      121 tttattgctg attacaccaa gcttcattct caccggcaac atcttcttat acagtacaat
      181 catcctttat attatcatca aaattgtttt atttcgattg ttgatgatga tactttcccc
      241 gaacacaagc gttttttgac aactcccgac tcccttagtc ttgataagtt ggcactagtt
      301 ggtagctcgc acggactgtt ctattttgtc ggccgaaggg atacaactat aacattgaaa
      361 gtggttgtta tttggaatcc ttcaataaat aaatcagttg ttgttcctct tcataatgtg
      421 aaaaaagatg gtgaacacta taaagatttt tttttcttgc tttcggggtt tgtccaaaca
      481 gacatgaccc gaagataa
//
LOCUS       XM_071832323             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842149), mRNA.
ACCESSION   XM_071832323
VERSION     XM_071832323.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139842149"
                     /note="uncharacterized LOC139842149; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842149"
     CDS             1..525
                     /gene="LOC139842149"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688424.1"
                     /db_xref="GeneID:139842149"
                     /translation="MMNSKSFFFFKFASETELQGVLESGPWIIRSTPIILDSWSPDVS
                     LTKEDLTRVPVWVKIHDVPIAGFTEIGLSVIASNIGYPLKLDSYTSTMCLESWGRPNF
                     ARALIDVSSDRELKENIKMAIPSIDGKRKSICTLKVEYEWKPPRYASCAIFGHTESQC
                     PKNVTITVEIQSKD"
     misc_feature    <40..321
                     /gene="LOC139842149"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
ORIGIN      
        1 atgatgaact ctaagagttt cttcttcttt aagtttgctt cggaaacaga attgcaagga
       61 gtgctagaat cgggcccatg gattatacgt tcaactccta taattcttga ctcatggtct
      121 cctgatgttt cattaacaaa ggaggattta acccgtgtcc cggtttgggt gaagatacat
      181 gatgtcccta ttgcaggatt tactgaaata ggattgagcg ttatagcatc aaatattggt
      241 tatcctttga agttagattc atacacgagt acaatgtgtt tagagtcttg ggggaggcct
      301 aattttgccc gagcattgat tgatgtttcg tcggataggg agttaaaaga gaacatcaaa
      361 atggcgattc ctagtatcga tgggaagaga aaatccatat gtactttaaa ggttgaatat
      421 gaatggaagc cccctcgata tgcgtcttgt gctatctttg ggcacacgga gtctcaatgt
      481 ccaaaaaatg ttactataac cgtagaaatt cagtctaagg attaa
//
LOCUS       XM_071832324             435 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842150), mRNA.
ACCESSION   XM_071832324
VERSION     XM_071832324.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..435
                     /gene="LOC139842150"
                     /note="uncharacterized LOC139842150; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842150"
     CDS             1..435
                     /gene="LOC139842150"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688425.1"
                     /db_xref="GeneID:139842150"
                     /translation="MANKFEFFLIAQVPRSMNKKADALNKLATSVFSQFAKDEVAPLE
                     EVETWMSPIIVYLKNGTFPTDGAAARKIRMKAPLYMLREGVLFKKSFTAPLLRCVGLN
                     EAETIVREVHEGTCGMHAEFRTVVGKIMRLGYFWPSMYRDTK"
     misc_feature    <1..84
                     /gene="LOC139842150"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggcaaaca aattcgagtt tttcttaatt gcgcaagtgc cgcgatccat gaacaaaaaa
       61 gccgacgcac tcaataaact tgcaacaagc gtgtttagtc aattcgcaaa ggacgaagtg
      121 gcccccttgg aggaggtcga gacatggatg agtcccatta ttgtgtatct taagaatggg
      181 acgtttccaa ctgacggggc agcggcacga aagattcgca tgaaagcacc tttgtacatg
      241 ctaagggagg gagttctgtt caagaaatcc tttacagcac cgcttttaag atgtgtcggt
      301 ctgaatgaag cagaaacaat cgtaagggag gtgcatgaag ggacttgtgg catgcatgca
      361 gagtttagga ccgttgtggg aaagataatg cggttagggt atttttggcc gtcaatgtac
      421 cgtgatacga aataa
//
LOCUS       XM_071832325             432 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842152), mRNA.
ACCESSION   XM_071832325
VERSION     XM_071832325.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..432
                     /gene="LOC139842152"
                     /note="uncharacterized LOC139842152; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842152"
     CDS             1..432
                     /gene="LOC139842152"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688426.1"
                     /db_xref="GeneID:139842152"
                     /translation="MNTPTNRDIVVGIRARLDTYRKGWADELPQVLWTFRTTPKGSNR
                     ETPFSLVYSSEAVIPAKIAVPTQRVMEFNDESNVINLKENLDLLEERRDIAAIREASN
                     KQKISKYYNQRVRERTFRPDDFVWRNKNTSRVEDTGKLGPN"
ORIGIN      
        1 atgaacaccc ctaccaacag ggacattgtt gtcgggatac gggcaaggtt ggacacgtat
       61 aggaagggtt gggcggatga gcttccgcaa gtcttatgga cattccgaac cacacccaaa
      121 ggaagcaaca gagaaacgcc gttcagcctt gtttacagct ccgaagcggt aataccggca
      181 aaaattgccg ttcctaccca acgcgtgatg gagttcaatg atgagtccaa cgttattaac
      241 ttgaaggaaa atttggactt attggaggaa aggcgtgata tcgccgctat cagagaagcg
      301 tctaacaaac agaaaatttc caagtactat aatcaacgtg taagggaacg tactttccgt
      361 cccgatgatt tcgtgtggcg taataaaaat actagccggg tcgaagatac tggaaaattg
      421 ggacccaact ag
//
LOCUS       XM_071832326            1194 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139842153), mRNA.
ACCESSION   XM_071832326
VERSION     XM_071832326.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1194
                     /gene="LOC139842153"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 Proteins"
                     /db_xref="GeneID:139842153"
     CDS             1..1194
                     /gene="LOC139842153"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071688427.1"
                     /db_xref="GeneID:139842153"
                     /translation="MTWLPAKSLIRFRSVSKKWNSLISSSKFKADYTTRHALLQNLLI
                     CNSQSSTVRGWEGLLVSMVDDDTFSEQLYVTTPESLELKELQIVGSSHGLLCFVGVPG
                     FGFDRLKYTPNDVVIWNPSINNFVSIFMLNVKKGCLHGQYSFIGFGVCPNTLDPKIVK
                     FLTCKCRCNVDVEVFTLSSRVWRSPLSNTIMLRKNIDFTYPYNNVVIDGFIYWFVFER
                     RERINMIVSFNLTNEEFTEIQLSDEIQLSLKWSYHIDSRIFKFKESLAVVLQKAPQED
                     FEVWKMEINGVTRSFTRLFNIEIPDLSVIKLCGFNKNGQLILEMDNHGSRDLVAYEPY
                     TKRINNLVNNGRSGSFMVTSYTESLLLCDRYPTKLGLTRLDPFKKADPLLGRKWTPNI
                     HRRQR"
     misc_feature    <7..84
                     /gene="LOC139842153"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    274..999
                     /gene="LOC139842153"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgacatggc ttcctgctaa atcattaatt cgattcagat ccgtttcaaa aaaatggaat
       61 tctttaatca gtagctctaa gtttaaagct gattacacca cccgccatgc tctcctgcaa
      121 aatcttctta tatgcaacag tcaatcttca accgttcgtg gttgggaagg attattggtt
      181 tcgatggttg atgatgatac tttctccgaa caactgtatg tgacaactcc tgagtccctt
      241 gaacttaagg agttacaaat agttggtagc tcgcacggcc tgttatgttt tgtcggtgta
      301 cccggttttg gtttcgatcg tctgaagtat acaccgaatg atgttgttat ttggaatcct
      361 tcaataaata attttgtttc aatctttatg cttaatgtga aaaaaggttg tttacacggt
      421 caatattctt ttattggttt cggggtttgt ccaaacactc ttgacccgaa gatagtcaag
      481 tttttaacat gtaaatgtag atgcaatgtg gatgttgagg tttttacatt aagttcaagg
      541 gtgtggagga gtccattaag taataccatt atgcttcgta agaacattga tttcacctac
      601 ccttacaata acgttgtaat agatgggttt atttattggt ttgtgtttga aagacgtgag
      661 agaattaata tgattgtttc atttaatttg acgaatgaag aatttacgga gatacaactc
      721 tcggatgaaa tacagttatc attgaaatgg agctatcaca ttgattctcg aatattcaag
      781 tttaaggagt ctcttgctgt ggttctacaa aaggccccac aagaagattt tgaagtttgg
      841 aagatggaga ttaatggtgt aacaagatcg ttcaccaggc tattcaacat cgaaatacct
      901 gatttatcgg tgataaagct atgcggattt aataagaatg gacaacttat attggaaatg
      961 gataatcacg gttctcgtga ccttgtagct tatgaaccct acacaaaaag gataaacaat
     1021 cttgtgaata atggaaggag tggttcgttt atggtgactt cctatactga atcactactt
     1081 ctatgtgata gatacccgac caaattgggt ttgacccgtt tagacccgtt taaaaaagct
     1141 gacccattgc taggtagaaa atggactcct aatattcata gaagacaaag gtga
//
LOCUS       XM_071832327             513 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842154), mRNA.
ACCESSION   XM_071832327
VERSION     XM_071832327.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..513
                     /gene="LOC139842154"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842154"
     CDS             1..513
                     /gene="LOC139842154"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688428.1"
                     /db_xref="GeneID:139842154"
                     /translation="MKVEMKALNENNTWEKCAMPQGKKLVGCRWVFTIKYKPDGTIER
                     YKARLVAKGYTQTHGIDYSETFSPVAKIDTIRVHHMEAVMRIIRYLKKIAGNGVVFKK
                     NGHLEAQIYTDASWAGEKGDRRSTSGFFTIVGGNLVAWKSKKQKVVSLSSAESEFRGI
                     AKGVVEALWI"
     misc_feature    31..>243
                     /gene="LOC139842154"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    325..>510
                     /gene="LOC139842154"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaagttg agatgaaagc cttgaatgaa aataacacgt gggaaaaatg tgccatgcct
       61 caaggaaaaa aactagtggg atgtcgatgg gtatttacga taaaatataa accagatgga
      121 actattgaaa gatataaagc tcgactggtg gcgaaaggat acactcagac acatgggatc
      181 gattactccg aaaccttttc accagttgca aagattgata ccattagagt tcaccatatg
      241 gaagctgtaa tgaggatcat cagatactta aagaaaatag caggcaatgg agttgtattc
      301 aaaaagaatg ggcaccttga agcacaaatt tatacggatg caagttgggc tggagaaaaa
      361 ggagatagac gatcaacgtc aggattcttc acaatagttg gaggaaactt agttgcgtgg
      421 aagagtaaga aacaaaaggt cgtttcctta tctagtgctg aatcagaatt tagaggaatc
      481 gcaaagggag tggtggaagc gttatggatt tga
//
LOCUS       XM_071832329            1170 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At3g06240-like (LOC139842155), mRNA.
ACCESSION   XM_071832329
VERSION     XM_071832329.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1170
                     /gene="LOC139842155"
                     /note="F-box/kelch-repeat protein At3g06240-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 Proteins"
                     /db_xref="GeneID:139842155"
     CDS             1..1170
                     /gene="LOC139842155"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At3g06240-like"
                     /protein_id="XP_071688430.1"
                     /db_xref="GeneID:139842155"
                     /translation="MEVSDKERKMLDYQLPFEIQIEIMKWLPAESLIRFRSVSKPWKL
                     LISSLKFNCDYTTHHAQRQHLLLGYTRPSQGFLVSIVDDHTFPEHKLNVTIPESLELK
                     ELQVVGSSHGLLCFVGVPGNYEKNTPNDVVIWNPSIKKFVSICLLNVKKSCSHHQYSF
                     VGFGVCPNTLDPKIVKICTCKHKCNVNVEVFTFNSKVSRSPSSNILLHVDFTYPYNNV
                     VIDGFIYWFVFEIRERVYMIVSFDLTNEEFTKTRLPDELELSLKWSDHMDTRIFKLRE
                     YLVVVLQSMKTPQEVFEVWKMENGVTRSFTKLFNINIPDLSVIQLCGFNKNGQFILET
                     DNCGSRDLVAYEPHKKSINNLVNDGRIGSFMVTYYTESLLLSHGYDARPNWVRPV"
     misc_feature    43..153
                     /gene="LOC139842155"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; Region: F-box_AtFBW1-like; cd22157"
                     /db_xref="CDD:438928"
     misc_feature    order(43..45,55..57,64..69,76..81,91..93,97..102,112..120,
                     124..126)
                     /gene="LOC139842155"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438928"
     misc_feature    331..1050
                     /gene="LOC139842155"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggaggtat ccgacaaaga aagaaaaatg ttagactacc agctaccttt tgaaatacaa
       61 atcgagatca tgaaatggct tcctgctgaa tcattgattc gattcagatc ggtttcaaaa
      121 ccatggaagc ttctaatcag tagcttaaag tttaattgtg attacaccac tcaccatgct
      181 cagcggcaac atcttctttt agggtacact cgtccttcac aaggattttt ggtttcgatt
      241 gttgatgatc atactttccc tgaacacaag cttaatgtga caattcccga gtcccttgag
      301 cttaaggagt tgcaagtagt tggtagctcg cacggcctgt tatgttttgt cggtgtacct
      361 ggtaattatg agaagaatac accgaatgac gttgttattt ggaatccttc aataaaaaaa
      421 tttgtttcaa tttgtttgct taatgtgaaa aaaagttgtt cacatcatca atattctttt
      481 gttggtttcg gggtttgtcc aaacactctt gacccgaaga tagtcaaaat ttgtacatgt
      541 aaacataaat gcaacgtgaa cgttgaggtt tttacattta attcaaaggt gtcgaggagt
      601 ccatcaagta atattttact tcacgttgat ttcacgtacc cttacaataa cgtagttata
      661 gatgggttta tttattggtt tgtgtttgaa atacgtgaga gagtttatat gattgtttca
      721 tttgatttga cgaatgaaga atttacgaag acacgactcc cggatgaatt agagttatca
      781 ttgaaatgga gcgatcatat ggatacccga atattcaagt taagggagta tcttgttgtg
      841 gttctacaaa gtatgaagac cccgcaagaa gtttttgaag tgtggaagat ggagaacggt
      901 gtaacaagat cgttcaccaa gctattcaac atcaacatac cagatttatc ggtgatacaa
      961 ctatgcggat ttaataagaa cggtcaattt atattggaaa cggataattg cggttctcgt
     1021 gaccttgtag cttatgaacc ccacaaaaaa agcatcaaca atcttgtgaa tgatggaaga
     1081 attggttcgt ttatggtgac ttactatacg gaatcactac tgctatcaca tggatatgat
     1141 gcccggccca attgggttcg acccgtttag
//
LOCUS       XM_071832330             672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At2g35280-like
            (LOC139842156), mRNA.
ACCESSION   XM_071832330
VERSION     XM_071832330.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..672
                     /gene="LOC139842156"
                     /note="F-box protein At2g35280-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842156"
     CDS             1..672
                     /gene="LOC139842156"
                     /codon_start=1
                     /product="F-box protein At2g35280-like"
                     /protein_id="XP_071688431.1"
                     /db_xref="GeneID:139842156"
                     /translation="MEVTQPKTIENLPQDMLVEILSRVGSYSSDHLFMCKSVCKSFSK
                     LSKDPLVLKRLSLDRWPLLPWQNPRFFVFLFRCAIFGNPNAIFHWVLISYFDDRHIDY
                     GLECLKQASNSQLKEDVYVYGLIMFASCKIEEKHVGLQILNETFPPEPEIVVEVRTRV
                     FDLLRCLWLFNHRPFAYVATPCPISDHRGYFPHIHGFELTIPECMSCFWAYELRVFVN
                     RFAYN"
     misc_feature    34..153
                     /gene="LOC139842156"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(34..39,43..51,58..63,70..72,112..120,124..126,
                     133..135)
                     /gene="LOC139842156"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438935"
     misc_feature    order(34..36,46..48,55..60,67..72,88..90,94..99,112..120,
                     124..126)
                     /gene="LOC139842156"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438935"
ORIGIN      
        1 atggaagtta ctcaaccgaa gacaatcgaa aatcttccac aagatatgct tgtggaaatt
       61 ttatctcgag ttggaagtta ctcatccgac catttgttca tgtgtaagtc ggtttgcaaa
      121 agcttttcga agctttccaa agatccttta gtattaaaaa ggctttccct agatcggtgg
      181 cctctattac cttggcaaaa ccctagattc tttgtttttt tatttcgttg tgcgattttt
      241 ggaaacccta atgcgatatt tcactgggtt ttgatatctt attttgacga tagacatatc
      301 gattatgggc ttgaatgtct caagcaagct tcgaacagcc aacttaaaga ggatgtttat
      361 gtttatggtt taattatgtt tgcctcttgc aaaatagagg aaaagcatgt cggtttacaa
      421 attttgaatg aaacattccc accagagccg gagattgtgg ttgaagtgag aacaagggtt
      481 tttgatttgc tgcgatgttt atggttattt aaccaccgtc cttttgctta cgtggcaaca
      541 ccgtgcccta tctctgacca ccgtggttat tttccacaca tccatgggtt tgaactcacg
      601 ataccggaat gcatgtcgtg tttttgggcc tatgagttgc gtgtttttgt aaaccgattt
      661 gcatataact ag
//
LOCUS       XM_071832331            1815 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842157), mRNA.
ACCESSION   XM_071832331
VERSION     XM_071832331.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1815
                     /gene="LOC139842157"
                     /note="uncharacterized LOC139842157; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842157"
     CDS             1..1815
                     /gene="LOC139842157"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688432.1"
                     /db_xref="GeneID:139842157"
                     /translation="MSVSHSTWPVVLMPYNLPPWLCMKNPFLFLSLLIPGPSAPGNYI
                     DVYMQPLVDELKELWDTGVNTYDASTKSYFTLRTSLLWTVSDFPAYANLSGWSTKDSF
                     DGTKEREGPPRSLTGEQVLAELKGFEIKFGKLVKDNPSLPYNWKKRNGKTKDHLKGCR
                     DLEEMGIRHELHPEPLSNGKVYLPPACFEMDKKEKEKFCNVLKEVKVPNGYAANISRY
                     IQVKPTPKMLCLKSHDNHILMHQLLPVAIRNILPKHVRSVIMKLCRYYRQLCSKVLNP
                     NDLFNMEKDIGKILCDLERIFSPSFFDVMIHLSVHLASEARLGGPVHYRWMYPIERYL
                     GTLKSYVRNKSKPEGSIVEGYLAEEYLSFCPLYLASDVETIHNKTSQNHDDGGDDTVL
                     PIFCMHGRPIGASNVVKLGYDTLAIAHSHVLFNCSEIDFLQTEHLNILSHQNPKKRKC
                     DIQHLHSQEFEDDDITEPNLLLYKQIASNQVDEDMTSRDNRITSDIETLANGPSEVVK
                     KYKGYIINGFRFHINDVEKNMITQNSGVIHQALTSSFSSARDNDPIVVDVTYYDVLKD
                     IIELKYGDGKKVVLFHCDWISSGSRIKVDENGFTTLDF"
     misc_feature    <1..375
                     /gene="LOC139842157"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    805..1134
                     /gene="LOC139842157"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    1702..>1812
                     /gene="LOC139842157"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgagtgttt cacatagtac atggcctgtt gttttgatgc catataatct acctccatgg
       61 ttgtgcatga aaaacccttt tctattccta agtttactta tacccggtcc atctgctcca
      121 ggtaattata tagatgtcta tatgcaacct ctagttgatg agttgaaaga gttgtgggat
      181 actggagtta atacttatga cgcatcaact aagagttact tcacactgcg tacttctttg
      241 ttatggacgg taagtgactt tcctgcgtat gcaaatttat cgggttggag cactaaagat
      301 tcttttgatg gcacgaaaga acgtgaaggg ccaccgcgta gcttaacagg ggaacaagtg
      361 cttgcggagc tgaaaggttt tgaaataaaa tttggaaaac ttgtgaagga taacccatcc
      421 ttaccatata attggaagaa gagaaatgga aagaccaagg atcatttaaa aggatgtcgt
      481 gatttagaag aaatgggtat tagacatgaa cttcatccag aacctttatc aaatggcaaa
      541 gtgtatttgc ctcctgcatg tttcgaaatg gataaaaaag aaaaagaaaa attttgtaat
      601 gtgctaaaag aggtgaaagt gccaaatggt tatgctgcta atatttctag atacattcaa
      661 gtaaaaccta ctccaaaaat gttatgccta aaaagtcacg ataatcatat tttgatgcat
      721 cagttgcttc ccgtggcaat aagaaatatt ttaccgaagc atgtgcgttc tgttatcatg
      781 aagttatgtc ggtactacag acaattatgc tcaaaagttc ttaatcctaa tgatttattt
      841 aacatggaaa aagatattgg aaaaatactt tgtgatttag aaaggatttt ttcaccatca
      901 ttttttgacg tcatgattca tctatcggtt catctagctt cagaggccag attaggggga
      961 cctgttcatt accgttggat gtatccaatc gagaggtatt taggtacatt aaaatcttat
     1021 gtgcgaaaca agagtaaacc cgagggttca attgtagaag gatatttagc ggaagagtat
     1081 ttgtcatttt gtcctcttta tttagccagt gatgtcgaga ccatacataa taagactagc
     1141 caaaatcatg atgatggtgg tgatgatact gtcttaccaa tattttgtat gcatggtcga
     1201 ccaattggtg catcaaacgt agtaaaactc ggctatgaca ctttggctat tgcacactca
     1261 catgtgctgt tcaattgtag tgaaatagat ttcttacaaa cagagcatct gaatattctt
     1321 agtcatcaaa atccgaaaaa acgtaagtgt gacattcaac atttacatag tcaggagttt
     1381 gaggatgatg atataactga gccaaactta ttactgtata aacaaattgc ctcaaatcag
     1441 gttgatgagg acatgactag tcgggataac agaatcacaa gtgatataga gacattggca
     1501 aacggtccaa gtgaggttgt aaagaaatat aagggatata tcataaatgg tttccggttt
     1561 cacattaacg atgtagagaa gaatatgata acacaaaata gcggagtcat acatcaggct
     1621 ctaacaagta gcttctcgag tgctagagat aacgatccta ttgtggttga tgtcacttac
     1681 tacgatgttt taaaagatat aatcgagttg aagtatggtg atgggaagaa agttgttttg
     1741 ttccattgtg attggatatc aagtggttcc aggataaaag ttgatgagaa tgggtttacg
     1801 acactcgatt tttga
//
LOCUS       XM_071832332            2433 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842158), mRNA.
ACCESSION   XM_071832332
VERSION     XM_071832332.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2433
                     /gene="LOC139842158"
                     /note="uncharacterized LOC139842158; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842158"
     CDS             1..2433
                     /gene="LOC139842158"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688433.1"
                     /db_xref="GeneID:139842158"
                     /translation="MKYMFVFGIISNPPPVVNEVVANDPNDTPMWNVRMVAQTVVPPA
                     ITKPPIEVDNWKIEGNFFTIFKDRLFRGLIDENPFDHIQYFNDICDIYKYKDVTEDAF
                     KLRAFPFMLDGEAKAWLRNLRSDSIRSFQDLNEAFINHFFPPSKVERLRMEINGFTQR
                     EDESLYDAWVRFKKLLRVCPPHGLNKKEYINTLYRGTNFPTKQYLNSSSGGAPSPREL
                     TRKNVAQVESEDGQVTLASLNNQFQLYGKELKKLQQTIVAMQVGRQRCEGPHLTKNCP
                     QVNQCNHIDLDDIPMNSDAHVNFVSNQNFQRGGTSTQGNNSFQSNNSYYNPNQKQVSF
                     NTQTNTPPGFSNQNRNQGYNSNYNQNRQNNFQSYNQQSYNNQSYNNHSNPDYQGNQSY
                     QNQGFNPQNNQGYIQQNQQSQQNNQPSQPSKELEEIMQTYIKKAESTEAFLLKENEFL
                     KQQLKQQQASFQTLESTVGRLSSYVAERPRGTLPSNTQVNPSTHNNNRVEEPQPQPFI
                     TQEPLPSFIEEEIRVNNEKGKEKVDATGVNGNDAKGKDEKGKDKGKEPLKVTRSVPYP
                     KALRKDKLAAQYQKFQDMMQNVSVNLPITDVLKGMPNYGCFIKELISQKGKYHEETSF
                     FIEEECNKILASRPRIPKKLGNPGKFVFPCKFGESEVFNALADLGASINLMPHSLYER
                     LGLGPLKPTRICIRLANHSFDTAIGIAKDILVSIDSLVFPVDFVIMEMKEDLQVPLIL
                     GRPFLATADTIILVQRNQLNIGVGEERVTINIREAMKQPSNTDDDESLQEKRPYRTTT
                     KVLLCTLIGSLS"
     misc_feature    313..588
                     /gene="LOC139842158"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
     misc_feature    1954..2238
                     /gene="LOC139842158"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1999..2001,2005..2007,2011..2013,2083..2091,
                     2215..2217)
                     /gene="LOC139842158"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1999..2007
                     /gene="LOC139842158"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1999..2001
                     /gene="LOC139842158"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(2083..2094,2104..2115)
                     /gene="LOC139842158"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaaatata tgttcgtttt tggcattatc agtaatcctc caccggtggt taatgaagta
       61 gttgcaaacg atccaaatga cactccgatg tggaatgtta gaatggtggc acaaacggtt
      121 gtgcctccgg ctatcacaaa accaccaatt gaagtggata attggaagat cgagggtaac
      181 tttttcacaa tattcaagga tagactcttt cgcgggttaa tagatgaaaa cccttttgat
      241 cacattcaat actttaacga tatttgtgac atctacaagt acaaagatgt caccgaagac
      301 gcttttaagc taagggcatt ccccttcatg cttgatggag aagctaaagc ttggttaagg
      361 aacttgcggt cggattctat taggtctttt caagatttaa atgaggcatt tatcaatcac
      421 tttttcccac cttcaaaggt ggaacgtttg agaatggaaa ttaatgggtt cacgcaaagg
      481 gaagatgagt ctttgtatga tgcgtgggtg cgtttcaaga agttattaag agtttgccca
      541 ccgcatggtc taaacaagaa ggagtacatc aacacgttat accggggtac caattttcca
      601 actaagcaat atcttaattc atcttcgggt ggagcacctt caccaagaga attgacgagg
      661 aagaatgtag ctcaagtgga gagtgaagat gggcaagtta ccttggcaag cttgaataat
      721 caatttcaat tatatggaaa agagttgaag aagctacaac aaacgatcgt ggcgatgcaa
      781 gtcggtcgtc aaaggtgtga aggaccacac ctcaccaaaa attgtcccca agttaatcaa
      841 tgtaatcaca ttgacttgga tgacattcct atgaattcgg atgctcacgt gaactttgtg
      901 agtaaccaaa actttcaaag aggaggaact tctacccaag gcaacaattc tttccaatcg
      961 aataatagct actacaaccc taaccaaaaa caagtgtcat ttaacactca aaccaacaca
     1021 cctccaggat tctccaacca aaaccgaaac caaggctata actctaacta caaccaaaac
     1081 cgacaaaaca acttccaatc ctacaatcaa caaagttaca acaatcaatc ttacaacaac
     1141 cattccaacc cagattacca aggaaatcaa agttatcaaa accaaggttt taatccacaa
     1201 aataaccaag gttacattca acaaaaccaa caaagtcaac aaaataacca accgtcccaa
     1261 ccttctaaag aattagaaga gattatgcaa acttatatca agaaggcgga atccaccgaa
     1321 gcatttttgt taaaggaaaa cgagttcttg aagcaacaac ttaagcaaca acaagcctca
     1381 ttccaaaccc ttgagagcac cgttgggaga ctatcaagct atgttgccga aagacctcga
     1441 ggaactttgc catccaacac tcaagttaac ccaagcactc acaacaataa ccgagttgaa
     1501 gaaccacaac cacaaccttt tatcacccaa gaaccactac caagcttcat tgaggaggaa
     1561 atcagggtta ataatgagaa gggtaaagaa aaggttgatg caactggggt caatggtaat
     1621 gatgcaaagg gtaaagatga aaagggtaag gataagggta aagagccttt gaaggttaca
     1681 aggtcggttc catatccaaa agctttaagg aaggacaagt tggcggctca gtaccaaaag
     1741 tttcaagata tgatgcagaa tgtgtcggtc aacttgccta ttaccgatgt gctcaaaggg
     1801 atgcccaatt atggatgctt catcaaagag ttaatctctc aaaagggtaa atatcatgag
     1861 gaaacgtcat tctttattga agaggagtgc aataagatac ttgcatcaag gccaagaatc
     1921 cctaaaaagt taggtaatcc gggaaaattt gttttcccat gtaagtttgg tgaatcggaa
     1981 gtgtttaatg cactagccga cttgggagca agcattaacc taatgcccca ctcactttat
     2041 gaaagacttg gccttggacc tcttaaaccg actcgaattt gtataagatt ggccaaccat
     2101 tcgtttgaca ccgctattgg aatcgccaag gacatcttgg ttagcattga ctccttggtg
     2161 ttcccggttg attttgttat catggagatg aaggaggacc ttcaagtccc cctcatctta
     2221 ggtagaccat ttcttgcaac cgccgacacc atcatcttag tacaacgcaa tcaactcaac
     2281 attggagttg gtgaagagcg tgtgaccata aatattcggg aagctatgaa gcaaccgagc
     2341 aacaccgatg atgatgagtc actacaagaa aaacggcctt ataggaccac cacaaaagtc
     2401 ctattatgta ctctaatagg atctttgagc tga
//
LOCUS       XM_071832333            1738 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842161), mRNA.
ACCESSION   XM_071832333
VERSION     XM_071832333.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1738
                     /gene="LOC139842161"
                     /note="uncharacterized LOC139842161; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842161"
     CDS             29..1738
                     /gene="LOC139842161"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688434.1"
                     /db_xref="GeneID:139842161"
                     /translation="MEGVWETAEYILQLPSQYDRPLVQCGITDNRDTVLHIAASSSQS
                     TDFVRNLVLVMQDTDLVYQNENGNTALCLAAMTGNVEIARIMVARNSDLLTIRNRSNM
                     TPLLIAALYGKRDMVNYLYDVADRESWTYADYIWVCLKCVQTDLFDIAIRIFPEIPDI
                     EGARETQDILGLLARKPSAFEEPKPNLMSRMMGCFKGRTHSNTSEAMQLLNLILTRSG
                     RWSQRVLHDRLRGPATLVTQTSQDGQSSTQIRTYPARVLFLAAEMGNINFLVELFRKY
                     PDLIWKVNDNLQNIFHVAVSRRHESIYNLLDEIGSMKDLIVTQKDRDGNTLLHTVAKN
                     AKNNGLQDVSGAAFQMQRRLLWYKKVESMIPPHYTEKRNNRGLTPSELFSETHNDLLI
                     ESEKWMKGTASKCMLVATLIATIVFGVAYTIPGGYDQRNGYPMFRHTPTFIVFVMFDA
                     ISLILSTTSILVFLSILTSRYAQEDFIESLPTKLMKGLTTLFFSIVTMMIAFSVSFFV
                     LYHHKGYYTIGGSISLLALLSIVFYVVLHWSLLNDVLHSTYGSKSLFKPKKQMLYYKS
                     PSV"
     misc_feature    <113..>430
                     /gene="LOC139842161"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    order(122..124,134..139,146..154,161..166,182..184,
                     191..193,218..220,224..226,230..232,242..247,254..262,
                     266..271,281..283,290..292,320..322,326..328,332..334,
                     344..349,356..364,368..373,383..385,392..394)
                     /gene="LOC139842161"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    122..220
                     /gene="LOC139842161"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    224..322
                     /gene="LOC139842161"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1211..1552
                     /gene="LOC139842161"
                     /note="Domain of unknown function; Region: PGG; pfam13962"
                     /db_xref="CDD:433609"
ORIGIN      
        1 catatgttcg gccctatata aagcatcgat ggaaggagtt tgggaaacag ctgaatacat
       61 attgcaacta cccagtcagt atgacagacc acttgtacag tgtggcatca ctgataaccg
      121 tgacacagtg cttcatattg ctgcttcgtc ttcccaaagc acagatttcg tgcgaaatct
      181 tgttctcgtg atgcaagata ccgatttggt gtatcagaat gagaatggga acactgccct
      241 ttgtttggca gctatgactg gaaatgttga aattgccaga attatggtgg ctaggaacag
      301 tgatttgctg acaattcgta atagatcaaa tatgacacca cttcttattg ctgctctata
      361 tggaaagcgt gacatggtaa actatttgta tgatgtagcc gatcgtgaaa gctggacata
      421 tgcggattat atatgggttt gcttaaaatg tgtgcagact gatctatttg atattgcaat
      481 acgaatattt ccggaaatac cagacattga aggtgctaga gagactcaag atattcttgg
      541 acttttggct cgaaaacctt cagcatttga agaacccaag ccaaatctta tgagcagaat
      601 gatgggttgt ttcaagggga gaacacattc aaacacaagt gaagcaatgc aattactaaa
      661 tctaattttg acacgttccg ggcgatggtc acaaagagta ttacatgata gactcagagg
      721 ccctgcaaca ctcgtgacac aaacttctca agatggtcaa tcgtcaactc aaataagaac
      781 ataccctgct cgggtacttt ttcttgctgc tgaaatgggc aacattaact ttttggttga
      841 gctttttcgt aaatatcctg atcttatttg gaaagtaaac gacaatctac aaaatatatt
      901 tcacgttgct gtctctcgtc gccatgaaag tatctacaat ctcttagatg agattggctc
      961 aatgaaggac ttaatagtta ctcagaagga cagagatgga aatactttgt tgcatactgt
     1021 tgctaaaaat gcaaaaaata atggactgca agatgtctcg ggagcagctt ttcagatgca
     1081 acgtcgattg ttatggtata agaaagtaga gtccatgata cctccacatt acacagaaaa
     1141 aagaaacaac agaggtctca caccaagcga actattcagc gagacccaca acgatttact
     1201 tattgaaagt gagaagtgga tgaaaggaac agctagtaaa tgcatgttgg ttgctacact
     1261 gatagccacc atagtatttg gagttgctta tacaattcca ggtgggtatg atcagagaaa
     1321 tggttatccc atgttccgtc acacaccgac cttcatagtg tttgtcatgt ttgatgccat
     1381 ttctttaatc ttgtctacaa cttccatact tgtgttcttg tcaatactca cttcgcgtta
     1441 cgctcaagag gatttcatag aatcattacc cacaaagcta atgaaaggtc taacaacact
     1501 tttcttttct atagtgacca tgatgattgc tttcagtgtc agtttctttg tgttgtacca
     1561 tcacaagggc tattatacca taggaggttc aattagttta cttgctcttc tatctatcgt
     1621 tttttatgtc gtactacatt ggtctcttct aaatgacgtg cttcactcaa cgtatggttc
     1681 gaaatctctc tttaagccga agaaacaaat gctctactat aaaagcccaa gcgtttaa
//
LOCUS       XM_071832334            1431 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139842162), mRNA.
ACCESSION   XM_071832334
VERSION     XM_071832334.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1431
                     /gene="LOC139842162"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842162"
     CDS             1..1431
                     /gene="LOC139842162"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071688435.1"
                     /db_xref="GeneID:139842162"
                     /translation="MSSTSWSSEEFFMQVLDIINSEALESENEAESSHTRRYIEREHE
                     AAHVRLMTDYFVEGCKYSDDNFKRSEALESENEAESSHRRRYIEREHEAAHVRLMIDY
                     FVQGCKYSDDNFKRRFRMRRRVFLRITEDILNYHKDPLPEYFKYFHLRVDARGKLSIS
                     THLKITAALRQLAYGDTPDLFDEYLQMSERTSRESLMHFCKCIIDLYKDEYMREPTTE
                     DIKRLYEAHEDIHGLPGMMGSIDCMHWAWGRCPVAWKGQFTRGNHKVPTIMLEAVASY
                     DNWIWHAFFRVAGSNNDLNVLNASNLFNSMLNEETEDIPFTVNEVEYKRGYYLADGIY
                     PGWASFVKAFSSANDEKHKYFSKKQAAARKDVERTFGILQGRWHILQQPARAYSVNVM
                     KQMMYTCIILHNIIVEDNGFALTENDWVYEPVHNMQTTWIERCETYRRRTKELRDREV
                     HEDLRSDLVEHVWANRETSESETKSD"
     misc_feature    625..1233
                     /gene="LOC139842162"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcttcaa catcatggtc tagcgaagag ttttttatgc aagtgctcga tataatcaat
       61 agcgaggcgt tagaaagtga aaatgaagcg gaaagttctc acacacgtcg ttatatagaa
      121 cgtgaacatg aagccgcaca tgtacgtctt atgaccgact attttgttga aggttgcaaa
      181 tactccgacg ataattttaa aaggagcgag gcgttagaaa gtgaaaatga agcggaaagt
      241 tcacacagac gtcgttatat agaacgtgaa catgaagccg cacatgtacg tcttatgatc
      301 gactattttg ttcaaggttg caaatactcc gacgataatt ttaaaaggag gtttcgaatg
      361 cggcgtcgcg tatttctccg aattacggaa gacattctca actaccacaa agatccgcta
      421 ccggaatact ttaagtattt tcatttacga gttgatgcac gcggcaagtt gagtattagt
      481 acacacttaa aaataacggc tgctctacga caattagctt atggtgatac acccgatctt
      541 tttgacgagt acttgcaaat gtcggaacga acatctcgtg aatcattaat gcacttttgt
      601 aagtgtatta ttgatttata taaagatgaa tatatgcgag agcctaccac ggaagatatc
      661 aaaagattgt atgaagctca tgaagatatt cacggtttac ctggtatgat gggaagcata
      721 gattgtatgc attgggcatg gggaagatgt cccgttgcat ggaaaggtca atttactcga
      781 ggcaatcaca aagttccaac tattatgcta gaagctgtag cctcatatga taactggatt
      841 tggcatgctt tctttagggt tgcgggttca aacaacgact taaacgtctt gaacgctagt
      901 aatctcttca actcaatgct taatgaagaa acagaagata ttccttttac tgtaaatgag
      961 gttgagtaca aaagaggata ttatctagcg gacggtatat atcccgggtg ggcatcattt
     1021 gttaaggcgt tttcaagtgc aaatgatgaa aaacataagt acttttcgaa gaaacaagca
     1081 gcggcacgca aggatgttga gaggactttt ggtattttac aggggcgttg gcatatacta
     1141 caacaaccag caagggcata tagcgtcaat gtaatgaaac aaatgatgta tacgtgcatt
     1201 atcttacaca acataattgt tgaagataat ggttttgctc taaccgaaaa tgattgggtt
     1261 tacgaacccg ttcataatat gcaaacaact tggatcgaga ggtgcgaaac ttacaggagg
     1321 aggacgaaag aattacgaga tagggaagtg catgaggacc tacgatcgga tttggttgaa
     1381 catgtatggg ctaatcgtga gacgtcggag tcagagacga agtcggatta a
//
LOCUS       XM_071832335            2171 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842163), mRNA.
ACCESSION   XM_071832335
VERSION     XM_071832335.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2171
                     /gene="LOC139842163"
                     /note="uncharacterized LOC139842163; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842163"
     CDS             1..2145
                     /gene="LOC139842163"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688436.1"
                     /db_xref="GeneID:139842163"
                     /translation="MDESSDINNYHVTTSTNETPPNLEGPGPAPGQGPAPGQGPAPGQ
                     GPALGQGPVQGQGPVPGQGPAPGQGPAPGQGPAPGQGPAQGQGPVPGQGPALGQGPVP
                     GQGPALGQGPTPGQAASVLRLPRQDLFADDRRQDFIHICSPLYKAAIEGVWETANEIM
                     QQFNQNQNQNQDGRPPLVHYAITDNCETILHIAASSSRNTDFVRNLVRDMEPEDLLYQ
                     NLSKNTALCLAAMTGNVDIATIMVNKNRELLTIDFESHITPLYIAALYGKRDMVNYLY
                     DETRRQGGPYTHYKWVCLKCVETDLFDVALRIFPEIPDNDGANEIRDILGVLARKASA
                     FEETKQDLMSSMMGCFKGRPHPNTGEAMKLLDLILTRSETWPKQVLHNRLRGPVTIIN
                     RIGTYPARILFIAAEMGNIKFLVELFRKYPDLIWKVNDNKQNIFHVAVSHRHESIYNL
                     LYEIGSMKDLIVAQKDRDENTLLHIAAKNAKNNRLQDVSGAAFRMQRRLLWYKEVESM
                     IPPHYTEKRNKDGLTPSELFSQTHNKLLIESEKWMKGTASKCMLVATLIATVVFGVAF
                     TIPGGYEQNHGYPIFRHNPVFIVFVVLDAISLILSATSILVFLSVLTSRYALEDFKES
                     LPKKLMVGLTLLFLSILTMMIAFSVSFFVLYHHKFNLFIGGSISVLALLPIVVYGLLH
                     FPLLKDMYHSTYGSKSLFNPKKQMLYYKNPTV"
     misc_feature    <148..348
                     /gene="LOC139842163"
                     /note="High molecular weight glutenin subunit; Region:
                     Glutenin_hmw; pfam03157"
                     /db_xref="CDD:367362"
     misc_feature    order(553..555,559..561,571..576,583..588,592..594,
                     598..603,613..615,622..624,655..657,661..663,667..669,
                     679..684,691..699,703..708,718..720,727..729,754..756,
                     760..762,766..768,781..786,793..801,805..810,820..822,
                     829..831)
                     /gene="LOC139842163"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    553..657
                     /gene="LOC139842163"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    568..831
                     /gene="LOC139842163"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    661..756
                     /gene="LOC139842163"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1069..>1437
                     /gene="LOC139842163"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    1204..1302
                     /gene="LOC139842163"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1306..1398
                     /gene="LOC139842163"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1618..1959
                     /gene="LOC139842163"
                     /note="Domain of unknown function; Region: PGG; pfam13962"
                     /db_xref="CDD:433609"
ORIGIN      
        1 atggatgagt cgagtgacat caacaactat catgtgacca catcgacaaa tgaaacacca
       61 ccaaatctgg agggaccggg acccgcgccg ggacaaggac ccgctcctgg acagggaccc
      121 gctccgggac agggacccgc gctgggacag ggacccgtgc agggacaagg acccgtgccg
      181 ggacaaggac ccgcgccagg acaaggacca gcgcctggac agggacccgc tccgggacag
      241 ggacccgcgc agggacaagg acccgtgccg gggcaaggac ccgcgctggg acaaggaccc
      301 gtgccgggac aaggacctgc gctgggacaa ggacccacgc cgggacaagc tgcgagtgta
      361 ctcaggcttc cacgtcaaga tctttttgct gatgatagaa gacaggattt cattcacata
      421 tgttctcccc tatataaagc agcgatcgaa ggtgtttggg aaacagctaa tgaaatcatg
      481 cagcaattca atcaaaatca aaatcaaaat caagatggta gaccaccact ggtacattat
      541 gccatcactg ataactgtga aacaatactt catattgctg catcgtcttc tcgaaacaca
      601 gattttgtgc ggaatcttgt tcgggatatg gagcccgaag atttgctgta tcagaatctg
      661 agtaagaaca ctgccctttg tttggcagct atgacaggaa atgtagatat cgcaacaatt
      721 atggtgaata agaaccgaga gttgctgaca attgattttg aatcacatat tacaccactt
      781 tatattgctg ctctatatgg aaagcgtgac atggtaaact atctctatga tgaaacaaga
      841 cgtcaaggag gtccatacac gcattacaaa tgggtttgct taaaatgtgt ggagactgat
      901 ctatttgatg ttgcactacg aatatttcca gaaatcccag acaatgatgg tgctaacgag
      961 attcgggata tacttggagt tttggctcga aaagcttcgg catttgagga aactaagcaa
     1021 gatcttatga gtagtatgat gggttgcttc aaggggagac cacatccaaa cacaggcgaa
     1081 gcaatgaaat tactagatct aattttgaca cgttccgaga catggccaaa acaagtatta
     1141 cataatagac tcagaggccc tgtcaccatc ataaatcgaa taggaacata ccctgcccgg
     1201 atacttttta ttgctgctga aatgggcaac atcaaatttc tagttgagct ttttcgcaaa
     1261 tatcctgatc ttatttggaa agtaaacgac aataaacaaa atatatttca cgttgctgtc
     1321 tctcaccgcc atgaaagtat ctacaatcta ttatacgaga ttggctcaat gaaggattta
     1381 atagttgctc agaaggaccg agatgagaat actttgttgc atattgctgc taaaaatgca
     1441 aaaaataacc ggctacaaga tgtctcggga gcagcttttc ggatgcaacg tcgattgtta
     1501 tggtataagg aagtagagtc tatgatacct ccacattata cagaaaagag aaacaaagat
     1561 ggcctcacac caagcgaact attcagccag acccacaaca agttacttat tgaaagtgag
     1621 aagtggatga aaggaacagc tagtaaatgc atgttggttg ctacactgat agccacagta
     1681 gtatttggag ttgcttttac tattccaggt ggatatgaac agaatcacgg ttatccaata
     1741 ttccgtcaca acccagtctt catagtgttt gtagtgctag atgcgatatc tttaatcttg
     1801 tctgcaactt ccatactcgt gttcttatca gtcctcactt cacgttacgc gctagaggat
     1861 ttcaaagaat cattacccaa gaaactaatg gtaggtctaa ccttgctttt tctctctata
     1921 ttgaccatga tgattgcttt cagtgtcagc ttcttcgtgt tgtaccatca caagttcaat
     1981 ctcttcatag gaggttcaat tagtgtactt gctcttttac ctatcgttgt gtatggccta
     2041 ctacattttc ctcttctaaa ggacatgtat cactcgacat atggttcaaa gtctctcttt
     2101 aacccgaaga aacagatgct ttactataaa aatccaactg tttgatggtt gtacatgatc
     2161 cgttcaagtt t
//
LOCUS       XM_071832336             735 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842164), mRNA.
ACCESSION   XM_071832336
VERSION     XM_071832336.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..735
                     /gene="LOC139842164"
                     /note="uncharacterized LOC139842164; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842164"
     CDS             1..735
                     /gene="LOC139842164"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688437.1"
                     /db_xref="GeneID:139842164"
                     /translation="MLEAVASYDLWIWHAYFGPAGSNNDINVLNQSDLFKELLENRAP
                     PCNYTVNGKHFTKGYYLADGIYPDWATLVKSFKSTVVPKTKKFKRYQESARKDIKRAF
                     SVLQGHFAIIKSPARQFYIEKIQCIMYTSVILHNMITEDNGRAFCGFEEDYQPVRHSL
                     SISERFDTHLRMDKELRDSTIHHFLRDNLIEHIWSLPPNARIRHNPQAGPSAILEHVN
                     DNDESGPSGTNNQDEEEDEEENEDDE"
     misc_feature    <4..429
                     /gene="LOC139842164"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgttggaag cggtcgcctc gtatgatttg tggatttggc atgcttactt tggaccagct
       61 ggttcaaata atgatattaa tgtgttaaat caatccgatt tatttaaaga gttacttgaa
      121 aatagagctc caccgtgtaa ctatacggtg aatgggaaac attttacaaa agggtattat
      181 ttagcggacg gaatttatcc tgattgggcg acccttgtga aatcgttcaa aagtacggtt
      241 gtaccaaaaa caaaaaaatt caaaaggtac caagagtcag caagaaagga tatcaaacga
      301 gctttcagtg ttcttcaagg tcattttgca atcattaaaa gtcctgcaag acaattctat
      361 atcgagaaga tacagtgcat tatgtatacg tccgtgattt tacacaacat gataactgaa
      421 gataatggtc gagctttttg tgggtttgag gaggattatc aaccggttcg tcattcatta
      481 tcaataagtg aaaggtttga tacgcatttg cgaatggata aagaactacg agattctacc
      541 attcatcatt tcctccgaga caaccttatc gaacacattt ggagtttacc accaaatgca
      601 cgtattagac ataacccaca agcagggcct tcggcaattc tcgagcatgt caatgacaat
      661 gatgaatcag gaccttcggg aactaataac caagacgaag aggaggacga agaagaaaac
      721 gaagacgatg agtag
//
LOCUS       XM_071832337             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842165), mRNA.
ACCESSION   XM_071832337
VERSION     XM_071832337.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139842165"
                     /note="uncharacterized LOC139842165; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842165"
     CDS             1..447
                     /gene="LOC139842165"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688438.1"
                     /db_xref="GeneID:139842165"
                     /translation="MNFSQTPIPEYFTSFHQRRDACGLLGFNIVQKVTSAIRQLVYAA
                     STDLFNEYLHMGEQTSYDCLNKFCECIFHLCSTEYLRKPTAQDVQRLTTKQAQIHGFS
                     GMLGSIDCMHWRWRNCPARWKGHYTRGDHGYPSIMFEAVASYDGWF"
     misc_feature    232..>441
                     /gene="LOC139842165"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgaattttt cccaaactcc gattcctgag tattttactt cttttcatca aagacgtgat
       61 gcttgtgggc tacttggttt taatattgtt caaaaagtaa catcagccat acgtcaacta
      121 gtgtatgctg cgtcgaccga tctttttaac gagtatttgc atatgggtga acaaacctca
      181 tatgattgtt taaacaaatt ttgcgaatgt atttttcact tgtgctcaac agaatatttg
      241 agaaaaccaa ctgcacaaga tgtgcaacgt ttgaccacta aacaagctca aatacatgga
      301 ttttcgggga tgttaggaag catcgattgt atgcattgga gatggagaaa ttgtccggca
      361 cgttggaagg gtcattatac acgaggtgac catggttacc cgtcaattat gtttgaagcg
      421 gtagcgtctt atgatggatg gttttag
//
LOCUS       XM_071832338            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DNA N(6)-methyladenine
            demethylase ALKBH1D-like (LOC139842167), mRNA.
ACCESSION   XM_071832338
VERSION     XM_071832338.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139842167"
                     /note="DNA N(6)-methyladenine demethylase ALKBH1D-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139842167"
     CDS             1..1038
                     /gene="LOC139842167"
                     /codon_start=1
                     /product="DNA N(6)-methyladenine demethylase ALKBH1D-like"
                     /protein_id="XP_071688439.1"
                     /db_xref="GeneID:139842167"
                     /translation="MPGHNRHGNRSVSGKSDGKIKQTNAERKMKSKIVTDGLQSVLKN
                     VKLDDNDECNSKNSNKNGGKPYGKDDGNRESGDKDNGSNKMRFDICPKRDNVKPKAPS
                     LFLYKVRGNQPKHKGKGNVYFRPVMVLMNNYISIEDQISIVKTCRELGVNNGGFYQPC
                     YSDGSKLNLKMMCLGKNWDPETKLYSETRPVDNAESHPIPEVFHDMVIKALQDSNAYI
                     MNQVPEANVGALNPLMVPDICIVNFYSESGKLGFHQDEDESEMSLKKGLPVVSFSIGD
                     SAEFLYGETWNPDDAEKVILESGDVLIFGGKSRHIFHGVSYILPDTAQTSLIESTDMR
                     PGRLNLTFRKY"
     misc_feature    379..1029
                     /gene="LOC139842167"
                     /note="2OG-Fe(II) oxygenase superfamily; Region:
                     2OG-FeII_Oxy_2; pfam13532"
                     /db_xref="CDD:433285"
ORIGIN      
        1 atgccaggac ataatcgtca cggaaatcga tctgtttctg gtaaatccga tggtaaaatc
       61 aaacaaacaa acgctgagcg gaaaatgaaa tccaagattg taaccgacgg attacaatct
      121 gttctgaaaa atgttaagtt ggatgataat gatgaatgta attctaagaa ctcaaataaa
      181 aatgggggaa agccttatgg gaaagatgat ggtaatcgag aatcaggcga taaagataac
      241 ggttcaaaca aaatgcgatt tgatatctgt ccaaaaaggg ataatgttaa accaaaagct
      301 ccttcacttt tcttgtacaa agtaagagga aatcaaccta aacataaagg taaaggcaac
      361 gtttatttta ggcctgtaat ggtacttatg aacaactaca tctctattga ggatcagatt
      421 agtattgtga aaacttgcag ggagcttggt gttaataatg gaggttttta ccaaccttgt
      481 tatagtgatg gaagtaagtt gaatttgaag atgatgtgtc ttggtaagaa ttgggatcct
      541 gagactaaac tgtacagtga aacgaggccg gtcgataatg ctgaatctca tccgattcct
      601 gaagtttttc atgatatggt gataaaagca ttacaagact cgaatgccta tattatgaat
      661 caagtaccag aagctaatgt aggagcactc aatcccttaa tggtacctga tatttgcatt
      721 gtcaattttt attcagaaag tggcaagctt ggtttccatc aggatgaaga tgagagtgaa
      781 atgagcctga agaaaggatt acccgttgtc tcattctcaa taggtgactc tgctgaattt
      841 ttatatggcg aaacttggaa tcctgacgac gctgaaaaag tgattttaga atcaggagat
      901 gttttgatat tcggtgggaa atcaaggcat atatttcatg gtgtctctta tattcttcct
      961 gatactgctc aaacatcgtt gatagaatca acagatatgc gtccaggtcg tttgaatctc
     1021 acctttagaa aatattga
//
LOCUS       XM_071832339             630 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842168), mRNA.
ACCESSION   XM_071832339
VERSION     XM_071832339.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..630
                     /gene="LOC139842168"
                     /note="uncharacterized LOC139842168; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842168"
     CDS             1..630
                     /gene="LOC139842168"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688440.1"
                     /db_xref="GeneID:139842168"
                     /translation="MAAISPKLHPAITVNNIKNFIPIVLVMDNSQYGSWAELFKIHCR
                     AFEVLNHIIPAANSSSTSETTQTNTNTTQTNTKSWARLDDIVLQWIYRTISHELLLAI
                     MSPDQTANQAWERLKDIFQDNQHSRAVYLYLQQKFSNIRQFDFPNIDAYCQEIESVGD
                     QLASVSVNKINDDHLVLQIITGLNEGYQSMATNLHHREKLPSFYQARPC"
     misc_feature    265..606
                     /gene="LOC139842168"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggcagcca tttctcccaa actacaccct gcaatcactg taaataacat caaaaacttt
       61 atccccattg ttcttgttat ggataactca caatatggtt cttgggcaga attgttcaag
      121 atccactgcc gcgcattcga agttctcaat cacatcatcc ctgctgctaa cagttcatcc
      181 acttctgaaa caacacaaac aaataccaac accactcaaa ccaacactaa atcatgggca
      241 cgattggacg acatagtcct tcaatggata tacaggacta tatcacatga attactgctc
      301 gcaatcatgt ctcctgatca aaccgccaat caggcatggg aacgccttaa agacatcttt
      361 caagacaatc aacattcacg agctgtttac ctttacctgc aacaaaagtt ctctaatatt
      421 cgacaatttg atttccctaa catcgatgcc tattgccagg aaatcgaatc cgttggtgat
      481 caattagcaa gtgtaagcgt caacaaaatc aatgatgatc acctcgttct tcaaataatt
      541 accggtctca atgaaggcta tcaaagtatg gctactaacc tgcatcatcg tgaaaagctt
      601 ccctctttct accaagctcg cccatgttaa
//
LOCUS       XM_071832340             885 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842169), mRNA.
ACCESSION   XM_071832340
VERSION     XM_071832340.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..885
                     /gene="LOC139842169"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139842169"
     CDS             1..885
                     /gene="LOC139842169"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688441.1"
                     /db_xref="GeneID:139842169"
                     /translation="MKDLGPLSSFLGISVTRSQNGLFLNQTAYANDIIQRAGLNSCNT
                     VSTPVDTQAKLSGTLGAPYHNPTEYRSLAGALQYLTFTRPDISYAVQQICLHMHALHE
                     SHMLALKRILRYIKGTTSLGLFITKSSSNSLISYTDADWAGCPDTRLSTSGYCMYLGD
                     NLISWSSKRQATVSRSSAEAEYRGVANVVAESCWVCNLLVELGHSVRKATLVFCDNVS
                     AIYLKGNPVQHQRTKHIELDIHFVRKKVARGQIRVLHVPTRYQIADIFTKGLPRILFQ
                     EFHNSLCVCNPRVSTAGE"
     misc_feature    <1..147
                     /gene="LOC139842169"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    406..819
                     /gene="LOC139842169"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(412..423,526..534,541..543,643..645,721..723,
                     802..804)
                     /gene="LOC139842169"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaggatc ttggcccact tagttcgttt cttggcatat cggttacacg tagtcaaaat
       61 ggattgttct taaatcaaac ggcttatgca aacgatataa ttcagcgtgc gggtttaaat
      121 tcctgtaaca cagtttcaac tccagtcgat actcaagcaa aacttagtgg tacattaggt
      181 gcgccatatc acaatcccac cgaatacagg agcttagctg gcgctttaca gtacctaacg
      241 tttactcggc ctgatatttc gtatgccgtc caacaaatct gccttcacat gcacgctcta
      301 cacgaatccc acatgctcgc gttgaagcgt attttacgat atattaaggg caccacatct
      361 cttggtttat ttattacaaa gtcttcatcg aattcactta tttcttatac ggatgccgat
      421 tgggcagggt gcccggatac tagactttca acatcgggtt attgtatgta tctaggtgat
      481 aatttaattt catggtcctc aaaacgtcaa gctactgtct cacgctcgag tgcggaggct
      541 gaatataggg gggttgctaa tgtggttgcc gaatcgtgtt gggtatgcaa ccttttggtc
      601 gaacttggtc actcagtccg caaagccacc ttagtttttt gtgacaacgt aagtgccatc
      661 tatttaaaag ggaatcccgt acaacatcag cgaaccaaac atattgaact agacatacat
      721 tttgtacgca aaaaggttgc acgcgggcag attcgagtct tacatgtccc aacacgttac
      781 caaatagcgg atatattcac caagggatta ccacgtattc tcttccagga atttcacaat
      841 agcctatgtg tttgtaatcc gcgagtatcg actgcggggg agtaa
//
LOCUS       XM_071832341            1328 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein
            HYPER-SENSITIVITY-RELATED 4-like (LOC139842170), mRNA.
ACCESSION   XM_071832341
VERSION     XM_071832341.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1328
                     /gene="LOC139842170"
                     /note="protein HYPER-SENSITIVITY-RELATED 4-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:139842170"
     CDS             1..1323
                     /gene="LOC139842170"
                     /codon_start=1
                     /product="protein HYPER-SENSITIVITY-RELATED 4-like"
                     /protein_id="XP_071688442.1"
                     /db_xref="GeneID:139842170"
                     /translation="MSVYCFYESEGFNNNEIYKSAQLYLSARITPDIHRLKVTKIPKQ
                     KDIAVEMETNEEFMDVYNGVKLYWIMVSKKTPAREYRGDGDEDYSLRYDLRSLELTFH
                     RDHKDMVLNDYLPHIIKHAEIKKREQKNVKLFTVNTRSYSSGTSTWTSVNLDHPAKFA
                     TLAMDTGIKEKVMKDLDRFVERREYYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANHL
                     NFDIYDLELTDVKSNFELRSLLLATANRSILVVEDIDCSAKLHNRVAATEDAQNINND
                     DSHKKKTVTLSGFLNFIDGLWSSCGDERIIIFTTNHKDKLDPALLRPGHMDVHIHMSY
                     CTPCGFRLLASNYLGITQHDLYNQIEDLVVKINVTPAEVAEQLLKDDDPDIVLGALVK
                     FLEVKKIENEEEIAKSEINKKRIEIEESLKAKMIKNKEQESNGQYESD"
     misc_feature    1..216
                     /gene="LOC139842170"
                     /note="Domain associated at C-terminal with AAA; Region:
                     AAA_assoc; pfam14363"
                     /db_xref="CDD:464152"
     misc_feature    514..996
                     /gene="LOC139842170"
                     /note="Mitochondrial chaperone BCS1; Region:
                     RecA-like_BCS1; cd19510"
                     /db_xref="CDD:410918"
     misc_feature    order(604..606,610..612,616..624,757..759)
                     /gene="LOC139842170"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:410918"
ORIGIN      
        1 atgtctgtct actgctttta cgagtccgaa ggcttcaaca ataacgaaat ctacaaatcc
       61 gcacaactct acctatctgc tcgaatcact cccgacatcc accgtctaaa agtcaccaaa
      121 atccctaagc agaaagacat cgcggttgag atggaaacca acgaggagtt catggatgtt
      181 tacaatggag taaaactcta ctggattatg gtttctaaaa agacgcctgc tagagaatac
      241 cgtggtgacg gtgacgaaga ttattcttta cggtacgatc tccggtcact ggaactcacg
      301 tttcatcgag accacaaaga tatggtgttg aacgactact tgcctcatat aattaaacac
      361 gccgagataa aaaaacgtga acaaaaaaac gtcaagttat tcacggtcaa tactagatcg
      421 tattcatccg gaacgtccac gtggacatcc gtgaatcttg accatccagc taagtttgcc
      481 acgttggcaa tggatacggg tatcaaggaa aaagtgatga aggatttgga taggtttgtt
      541 gaaaggaggg aatattatag gaaagtagga aaggcgtgga agagaggtta tttattgtac
      601 ggtccacctg ggacaggtaa atcaagcttg attgctgcta tggcgaatca cttgaatttt
      661 gatatatatg atttggaatt aactgatgtt aagtccaact ttgagctaag gtcattgttg
      721 ttagcaactg cgaatcggtc gatactggtg gtggaggaca tcgattgctc ggcgaagttg
      781 cacaatcgag tggcagcaac agaggatgct caaaatatta ataatgatga ctctcataaa
      841 aagaaaacgg taactttgtc gggttttctc aatttcattg acggattatg gtcaagttgt
      901 ggtgatgaaa ggatcatcat attcacaaca aatcacaaag acaaactaga tcctgcactt
      961 cttcgtcctg gacatatgga cgttcacatt catatgtcat attgcactcc atgcgggttt
     1021 cgccttttgg ccagcaatta tcttggcatc acccaacatg atctttacaa ccaaatagag
     1081 gatttagtgg ttaagattaa tgttactccg gcagaagtag cagagcaact acttaaggat
     1141 gatgacccgg atattgttct cggtgctctc gttaagtttt tggaggtgaa gaagatagag
     1201 aatgaagagg aaattgcaaa atcggaaatc aataagaaaa gaattgaaat tgaggaaagt
     1261 ttgaaggcga aaatgattaa gaataaagaa caagaaagca atggacaata tgagagcgat
     1321 tagagtgt
//
LOCUS       XM_071832342            1365 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable glycosyltransferase
            At5g25310 (LOC139842171), mRNA.
ACCESSION   XM_071832342
VERSION     XM_071832342.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1365
                     /gene="LOC139842171"
                     /note="probable glycosyltransferase At5g25310; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842171"
     CDS             1..1365
                     /gene="LOC139842171"
                     /codon_start=1
                     /product="probable glycosyltransferase At5g25310"
                     /protein_id="XP_071688443.1"
                     /db_xref="GeneID:139842171"
                     /translation="MGHEVQYILEFKRLIWLVAVVFAAVIIFQYFEFPYGNVSSSLFT
                     IGMTQPPVSGSDPSEPSSQVPELLGNFTRFDGSNNDTKLVDSLEKGSNVSIEIESKSN
                     KDDVTDEFAEKDGTRVFGDHVDEMHTGNLSMTNVSNSISPVLKSVETSVIAPSMALDD
                     NNSTYKSVTEIPSAGPSLKEPVTWQKSLAISPADSSSKKISPVKEVPLVQKVHELSMG
                     DVVTVSEMHNIMLHNRATVRSMKPLWTSSVDQELLDAKWQIENAPDDVSDPALYPPLY
                     RNVSKFKKSYELMEKILKVYVYKEGDKPIFHQPQTVLSGIYASEGWFMKHMKESKHFV
                     TVDPKQAHLFYLPFSSLMLEEKLYVKGSGSRDNLVQHLLDYLHLIAGRYDSWNRTGGS
                     DHFVVACHDWGTDETKRSLNTSIRALCNSDVKREGFELGKDAKCTVTFVPFSYNIGKT
                     KIPT"
     misc_feature    865..>1299
                     /gene="LOC139842171"
                     /note="ribitol-5-phosphate xylosyltransferase 1, and
                     related proteins; Region: RXYLT1-like; cl20239"
                     /db_xref="CDD:473306"
ORIGIN      
        1 atgggtcatg aagttcagta tatactcgaa ttcaagagat taatatggct agtagcagtt
       61 gtttttgctg cagttattat ctttcagtat tttgagtttc cgtatggtaa tgtttcgtca
      121 tcgttgttta ctatcggaat gactcaaccg cctgtcagtg ggtccgaccc atctgaaccg
      181 tcatctcaag ttcctgaatt gttgggcaat tttacccgtt ttgatggatc taataatgat
      241 acaaagcttg ttgattcact tgagaagggt agcaatgtaa gtattgaaat tgaaagtaaa
      301 tcgaataagg atgatgtcac tgatgaattc gcagaaaaag atggtactcg cgtgtttgga
      361 gatcatgtag atgagatgca taccgggaat ttgtctatga ctaatgttag taattcgata
      421 agcccagtat taaagtcagt tgagacgtct gtaattgctc cttcgatggc tttggatgat
      481 aataatagta catataaatc agtgacagag ataccgagtg cgggacccag tttgaaggag
      541 ccagtgacat ggcagaaaag ccttgccata tcacctgctg actcatcatc gaagaaaatt
      601 tcaccagtga aagaagttcc tcttgtgcaa aaagttcacg agctgtcaat gggtgacgta
      661 gtgacagtct ctgaaatgca taacattatg ctgcataatc gtgctacagt tcgttcaatg
      721 aaaccattat ggacttcatc ggtagatcaa gagttactag acgcaaaatg gcagatcgag
      781 aatgctcctg atgacgtcag cgatcctgca ctttaccctc ctctgtatcg taacgtttca
      841 aagtttaaaa agagctatga attaatggaa aagattctta aggtttacgt atacaaagag
      901 ggcgacaaac cgatatttca ccaaccgcaa actgtacttt cgggaattta tgcatctgag
      961 gggtggttta tgaaacatat gaaagaaagt aaacattttg ttacagttga cccgaaacaa
     1021 gcccatttat tttaccttcc ttttagctcg ttaatgttgg aagaaaagct gtatgtgaag
     1081 gggtccggta gtcgagataa tttggtacag cacttgttag actatcttca cctgattgct
     1141 gggagatatg attcgtggaa tcggactggt gggtccgatc atttcgtcgt tgcttgtcat
     1201 gattggggaa cagatgaaac caaaagatct ttgaatacca gcatacgtgc tctatgcaat
     1261 tcggatgtta aaagagaagg ttttgaatta ggaaaagacg ccaaatgcac ggtgacgttc
     1321 gtcccattct cttacaacat tgggaaaaca aagatcccta catga
//
LOCUS       XM_071832343             324 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842172), mRNA.
ACCESSION   XM_071832343
VERSION     XM_071832343.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..324
                     /gene="LOC139842172"
                     /note="uncharacterized LOC139842172; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842172"
     CDS             1..324
                     /gene="LOC139842172"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688444.1"
                     /db_xref="GeneID:139842172"
                     /translation="MVIWTPASDGTYMVADAIRIMLNSGNPICPDWPKVVWNNNVPSK
                     TVLFHLLALKKSILVRNVLSRRHILPVNQSSLCIWCLEEVETIDHLLTHCKWSFRIWA
                     YLFHV"
     misc_feature    61..300
                     /gene="LOC139842172"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtcattt ggactccagc ttcggatgga acatacatgg tggcagacgc cattcgcatt
       61 atgctaaatt caggtaatcc tatttgtccc gattggccca aagttgtatg gaacaataat
      121 gttccgtcca aaaccgtgtt atttcatttg cttgcgttaa agaaaagcat tctcgttcgt
      181 aacgttttgt ctcgaagaca tattttaccg gttaatcagt caagtttatg catatggtgt
      241 ttagaagagg tcgaaaccat tgatcatttg ttaacgcatt gcaaatggtc gtttagaatt
      301 tgggcctatt tgtttcatgt ttga
//
LOCUS       XM_071832344             684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842173), mRNA.
ACCESSION   XM_071832344
VERSION     XM_071832344.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139842173"
                     /note="uncharacterized LOC139842173; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842173"
     CDS             1..684
                     /gene="LOC139842173"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688445.1"
                     /db_xref="GeneID:139842173"
                     /translation="MHVQMHVYFVSNALSGSEVNYPPIEKLVYALVHTARRLRIYFQA
                     HPIVPEVFGRLDKWAIELGEPEINYSLRTTIKGQILADYLAEMITEIEAFSKIKETDP
                     VESKAWELYTDGACGPKGAGMHIAHQLGVKCLDAYIDSHLVANQVNGLFEVHDASMQS
                     YLELVHKLADEFDIFRLTQVPRGQNKKADVFSKLAALTFDHLHKSVWVKVLAEKFVDE
                     KLTVAPIEE"
     misc_feature    <19..192
                     /gene="LOC139842173"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    322..567
                     /gene="LOC139842173"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgcatgtac aaatgcatgt atactttgtt agtaatgcac tcagtggaag tgaagttaat
       61 tatccaccca ttgaaaagct ggtctacgcg cttgtgcata cagctcgccg gttgcgcata
      121 tattttcagg cgcatcctat tgtgcccgag gttttcggtc gattggacaa atgggccata
      181 gaattgggag aacccgagat taattactct ctgcgcacga caatcaaagg ccaaatactg
      241 gcagattatc ttgctgaaat gataactgaa atagaagcat tctctaaaat caaagaaaca
      301 gatcccgttg aaagcaaagc atgggaattg tacacagatg gtgcctgcgg cccaaaaggt
      361 gcaggaatgc acattgctca ccagttagga gtaaagtgtt tggatgcgta tatcgattcg
      421 caccttgtgg ccaaccaagt gaatgggtta ttcgaagtac atgatgcctc catgcaaagt
      481 tatctggagt tggtgcacaa gttggctgat gaattcgaca tctttcggtt aacacaagtg
      541 cctaggggcc agaataaaaa ggcagacgta tttagcaagt tggccgcctt aacatttgat
      601 catctgcata aaagcgtatg ggttaaagtt ctagcagaaa agtttgttga tgagaaactc
      661 acggttgcac ccattgaaga ataa
//
LOCUS       XM_071832345             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842174), mRNA.
ACCESSION   XM_071832345
VERSION     XM_071832345.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139842174"
                     /note="uncharacterized LOC139842174; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842174"
     CDS             1..504
                     /gene="LOC139842174"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688446.1"
                     /db_xref="GeneID:139842174"
                     /translation="MFNIFNEREKRAQRYKTACYNEQQGVFKVQSSYQRSGEGGTDYT
                     AEFKQKKCSCGIWEHQRLPCSHSISVCSRLNEDINTCISKKYTTTVWREQYSHHFNPL
                     RDASYWAPFEWDIMADPTRMIKHRGRKKSKCIKNQMDEREKKKPKCGICRAEGHNRNT
                     FPTTRLP"
     misc_feature    148..231
                     /gene="LOC139842174"
                     /note="SWIM zinc finger; Region: SWIM; cl45927"
                     /db_xref="CDD:459272"
ORIGIN      
        1 atgtttaaca tctttaacga acgggaaaaa agagctcaaa gatacaaaac agcatgttat
       61 aatgaacaac aaggtgtgtt caaggttcaa tcaagttatc aaagaagtgg tgaaggtggc
      121 accgattaca ctgcggagtt taaacagaaa aagtgttcgt gtggaatatg ggaacaccaa
      181 agattacctt gctctcattc catttctgtg tgtagccgtc taaatgagga tataaataca
      241 tgcattagta aaaagtacac aactaccgta tggagagagc aatatagcca tcattttaat
      301 ccactaagag acgcgagtta ctgggcacct tttgaatggg acattatggc cgatccaaca
      361 agaatgatta agcacagggg gaggaagaaa tcaaaatgta ttaagaacca gatggatgaa
      421 cgtgaaaaga aaaaaccaaa gtgtggtata tgcagggctg aaggtcacaa caggaatacc
      481 tttccaacta ctagattgcc atag
//
LOCUS       XM_071832346            1461 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842175), mRNA.
ACCESSION   XM_071832346
VERSION     XM_071832346.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1461
                     /gene="LOC139842175"
                     /note="uncharacterized LOC139842175; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842175"
     CDS             1..1461
                     /gene="LOC139842175"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688447.1"
                     /db_xref="GeneID:139842175"
                     /translation="MPFNTPEDTMPWVGLYVAIASLVCILAMAIDAFHGFLRWKHWFP
                     NKYFTLNAASLTLIAIAMKLPVDLNSNRSGVHDHRNIAKVTALIVPASRRNLERQYKE
                     LHKLSLNDQDINFSYKELTHHVKKYWMMAETGNPQFALACSQYTYNSLLKKLGLKPSV
                     SEINVRAEMEEYKRYVLQIEDDTKFSNRILRNTLNSITRLLQVSEKKSPKNLIKLLQT
                     SKGFNGVIEFDDERVPPLISEVIENSWSLVVVTLTAIGIALPSLENNRFKRLLLSVAE
                     GLYFVRHVEECLNNVGESLASSRKVAQRVGLEVEVYQTWLQIDLQKMARKGKTSKEII
                     QWLSDEAIQIVKQFKNYKNASLDHSFHKFVAANSMYRISQTLLVHYNEQQHWQTDQEV
                     YERVTTIIADILFACFTNLSRVIIMKCHHDAIEKRQDSIRTAAQILGKSKKILSILET
                     RQLPDMDKHSMAYVDKWRALSKNQIPSENDLESCKE"
ORIGIN      
        1 atgcctttta atactccaga ggataccatg ccttgggtgg gcttgtatgt tgcaattgca
       61 tctctagtgt gcattctcgc aatggccata gatgccttcc atggtttttt acgatggaaa
      121 cattggtttc caaacaaata tttcactctc aatgcagctt ccctcacgtt aatcgctata
      181 gctatgaagc taccggttga tctaaattcc aaccggtctg gtgttcatga tcatcgtaac
      241 attgcaaaag ttaccgcttt aatagttccg gcttctagaa gaaatttaga acgccaatac
      301 aaggagttgc acaaattgtc tttaaatgat caagatataa atttctccta taaggaatta
      361 acacatcatg ttaaaaagta ttggatgatg gcagaaaccg gtaaccctca atttgctctt
      421 gcttgttcac aatataccta caactcattg ttgaaaaagt taggactcaa accaagtgtc
      481 tctgaaatca atgtgagagc agagatggag gaatacaaga gatatgtttt acaaatcgaa
      541 gatgacacaa agttttcgaa tagaatatta agaaatacac tcaactctat tactcgtttg
      601 cttcaagtgt ctgaaaagaa aagcccaaaa aatctgatta aacttctaca aacctctaaa
      661 ggattcaatg gggtgataga gtttgacgac gaacgggtcc cgcctttgat atcagaagta
      721 atcgaaaact catggagtct agttgtagtg acattaacag ccattggaat tgcacttcct
      781 agcttagaaa ataaccgttt caagcgacta cttttgagcg tagccgaagg cctctatttt
      841 gttagacatg ttgaagaatg tctcaataat gtcggtgagt ctttggcgag ttcaagaaaa
      901 gtggctcaac gtgtaggctt agaagttgaa gtgtaccaga catggcttca aattgatctt
      961 caaaagatgg ctcgtaaagg gaaaacatca aaagagatta ttcaatggtt gagtgatgaa
     1021 gcgatacaaa ttgtgaaaca gttcaagaat tacaaaaatg caagtcttga tcactcgttc
     1081 cacaaattcg ttgcagcgaa tagcatgtac agaatcagtc aaaccttact agttcactac
     1141 aatgagcaac aacattggca aaccgaccag gaagtctatg agcgagtaac aacaataatt
     1201 gcagatatat tattcgcttg ctttactaac ttatcacgtg ttatcataat gaagtgtcat
     1261 catgacgcca tagagaaaag gcaagacagc attaggactg cagctcagat tcttggtaaa
     1321 tccaaaaaga tccttagcat ccttgaaacg cgacaattac cagatatgga taagcattct
     1381 atggcttacg tagacaagtg gcgtgcgcta tccaaaaatc agataccgag cgaaaatgat
     1441 cttgaaagtt gtaaggaata g
//
LOCUS       XM_071832347             684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842176), mRNA.
ACCESSION   XM_071832347
VERSION     XM_071832347.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139842176"
                     /note="uncharacterized LOC139842176; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842176"
     CDS             1..684
                     /gene="LOC139842176"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688448.1"
                     /db_xref="GeneID:139842176"
                     /translation="MVMERTKSDHCPIILKDEDKNFGPKPFKFFDVWLEKDGVDKIIE
                     DTWSSCDYKGLRMDYKFVFKLKKIKEALRVWSKEFHGKLDGEIEVQKNIALNLELKGE
                     IVALDEIELSMWKEARNKWFEKEKIKTSMIRQKSRTRWTLEGDENTRFFHSEIQNKNN
                     KSNIHGLIVNGVWTKIPHEIKRAAHEHLQAQFVEPDSNRPSLEELRYPSISTEEAAAL
                     DVCFLEDEI"
ORIGIN      
        1 atggttatgg aaagaactaa atcggatcat tgtcccataa ttttaaaaga tgaagataag
       61 aactttggcc caaagccctt taaattcttt gatgtttggc ttgaaaaaga cggagtagac
      121 aaaatcatag aagacacctg gagtagttgt gattacaaag ggctaagaat ggactataaa
      181 tttgtgttta aactcaagaa aatcaaagaa gccctccggg tatggagtaa agaatttcat
      241 ggcaagctag atggtgagat tgaggtacaa aaaaatattg ccctcaatct tgaactaaaa
      301 ggagaaattg tggcacttga tgagattgaa ttgagtatgt ggaaagaagc aagaaacaag
      361 tggtttgaaa aagaaaaaat caagacgagc atgataaggc aaaaatcaag aactaggtgg
      421 acgttagaag gtgacgaaaa cacaagattc ttccactccg agattcaaaa taaaaataac
      481 aagtcaaata ttcatggtct tattgttaat ggagtttgga caaaaatccc acatgaaata
      541 aagagggcgg ctcacgaaca tttacaagct cagtttgttg aacccgatag taacagaccc
      601 tccttagaag agctaagata tccctcgata tccacagaag aagccgctgc tctagatgtt
      661 tgtttcctgg aggacgagat atga
//
LOCUS       XM_071832348             549 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842177), mRNA.
ACCESSION   XM_071832348
VERSION     XM_071832348.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..549
                     /gene="LOC139842177"
                     /note="uncharacterized LOC139842177; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842177"
     CDS             1..549
                     /gene="LOC139842177"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688449.1"
                     /db_xref="GeneID:139842177"
                     /translation="MKIISYNIRDFGLGPDSKLGQTKKLIRDEKPLFFTIQETKLLLV
                     DRDWIAALWGNTDCDFIQREMTEKSGGQLLIGDTQVFEAAEVYSLDRVISIMGTWKAD
                     GSILNILNVYGPHENVLKKKLWESLGKVIESRDEAWVVCGDFNEVRNETERFNCVFKE
                     SRAKRFNEFINNCNLLDIPLGG"
     misc_feature    7..>534
                     /gene="LOC139842177"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgaagatta tatcttataa catcagagat ttcgggttag gtcctgatag caagctggga
       61 caaacgaaaa aattaattcg agatgaaaaa ccactctttt ttacaatcca agaaacaaag
      121 ttactcctgg tggatcgtga ttggattgca gcactatggg ggaatacaga ctgtgatttc
      181 attcaaagag agatgactga aaagtcggga ggtcaattat tgattgggga cacgcaagtt
      241 tttgaggcag ctgaagtata ttctcttgac agggtcatta gcataatggg tacttggaag
      301 gctgatggct caatcctaaa tatactcaat gtatatggcc cccatgagaa cgtattgaag
      361 aaaaaacttt gggaatcact tggtaaggta atagaaagtc gggatgaagc atgggtggtg
      421 tgtggagatt tcaatgaagt tagaaacgaa accgaaagat tcaattgtgt gtttaaggaa
      481 agtagagcaa agagattcaa cgagttcatt aataattgta acttattaga tatcccattg
      541 ggtggctga
//
LOCUS       XM_071832349             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides caffeoylshikimate
            esterase-like (LOC139842178), mRNA.
ACCESSION   XM_071832349
VERSION     XM_071832349.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139842178"
                     /note="caffeoylshikimate esterase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139842178"
     CDS             1..498
                     /gene="LOC139842178"
                     /codon_start=1
                     /product="caffeoylshikimate esterase-like"
                     /protein_id="XP_071688450.1"
                     /db_xref="GeneID:139842178"
                     /translation="MGLLLHPELSGHWVMPEWLVITLYTTLAVAPLFSLVAPKSQFKG
                     ANKRGIPVSRDPAALIAKYTDPLVYTGPMRIRTGHEILRISSHLMRNFKSVTVPFFIL
                     YGSADKVTDPLASQDLYNQAASKYKHIKLYEGFLHDLLFEPEREEIGQDIIDWMEMKL
                     SGYHY"
     misc_feature    <82..486
                     /gene="LOC139842178"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; Region:
                     alpha/beta hydrolases; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 atgggtctcc tgcttcatcc tgaactcagt ggccactggg ttatgcctga gtggttagtt
       61 atcacattgt atacaacact tgctgtagct cccttatttt cacttgttgc ccccaaatcc
      121 caattcaaag gtgccaacaa aaggggtatt ccagtctcaa gagacccggc tgctctcata
      181 gccaaataca ccgacccgtt agtatacacc gggcccatga gaatccgaac gggccatgaa
      241 attcttcgta tctcctcaca cttgatgcgt aacttcaaat ctgtgaccgt acccttcttc
      301 attctctatg gaagtgctga taaagtgacc gatccacttg cttctcagga cttgtacaat
      361 caggctgctt caaagtacaa gcacataaag ctctatgagg ggttcttgca cgatcttctc
      421 tttgaacccg agcgtgaaga aatcgggcaa gatattatcg attggatgga gatgaagcta
      481 agtggctatc attattag
//
LOCUS       XM_071832350            1437 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842179), mRNA.
ACCESSION   XM_071832350
VERSION     XM_071832350.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1437
                     /gene="LOC139842179"
                     /note="uncharacterized LOC139842179; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842179"
     CDS             1..1437
                     /gene="LOC139842179"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688451.1"
                     /db_xref="GeneID:139842179"
                     /translation="MSGDDSSAITVVSKIDFGDPLYLHTSDTTGTPIISVKLKGTENY
                     SIWSRSMMLALSTKNKVGFVDGTCIKNADNPVLASQWDRCNSVVLSWILGSISEDLYS
                     GQIYSTVASVVWTELKETYDKVDGSMIFNLHSKLNSLKQNGISVSDYYHNLNSLLKQY
                     DEMVKIPVCTCADDDFMQIRSNLLLRDPLPDVKAAFAVISREESHRKIASNSFSNKNQ
                     NHNSAFVSQVGNSGSISLIITSLRCYEIVGYPSHYKKPANQYNRSFSSNNSTTNVSSS
                     VSDNSDATTPSSLSSLTNEQMLKLLSLLNEPAAQSSNACANMEGKIYNMNTYFNENFN
                     RFFNSHSTINDNQGWIIDSGANQHMTVSEKELDNIIDISDFNLKVSHPNGTEAQVRKI
                     GNLKLTSNIILYDVLVVLGYCVSLLSVSKLVQDNELFVGFDRHKCYIQDLMSRNTLGT
                     GSLHRGLYLFDKGDNLCYSTAICDSALL"
     misc_feature    70..210
                     /gene="LOC139842179"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    265..621
                     /gene="LOC139842179"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtctggtg atgatagttc tgctattact gttgttagta agatagactt tggtgatcct
       61 ctttatttgc atactagtga tactactggt acacctatta tttctgttaa actaaaagga
      121 acagaaaatt attctatatg gagtagatca atgatgttag ctttatcaac taaaaataaa
      181 gtaggatttg ttgatggaac ttgtattaaa aatgctgata atcctgttct tgctagtcaa
      241 tgggataggt gtaattctgt ggttctttct tggatactgg ggtctatttc tgaagatctt
      301 tattctggtc aaatttattc tactgttgca tctgttgtat ggactgagct taaagaaact
      361 tatgataaag tggatggatc catgattttt aatttgcatt caaaactaaa ttctttaaaa
      421 caaaatggta tttctgtgtc tgattattat cataatctta attctttatt gaaacaatat
      481 gatgagatgg ttaaaattcc tgtatgtaca tgtgctgatg atgattttat gcaaataaga
      541 agcaatttat tactaagaga tcctcttcct gatgttaaag ctgcttttgc agtaatatct
      601 agggaagaat ctcataggaa gattgcttct aatagctttt caaataaaaa tcaaaaccat
      661 aactctgctt ttgtgtctca agttggaaat tctggatcca tttcacttat aataacaagt
      721 ctaagatgct atgagattgt tggctaccct tcacattata agaaacctgc aaatcagtat
      781 aacagatctt ttagttctaa taattctact actaatgttt catcttctgt ttctgataat
      841 tctgatgcta ccacaccttc atccctttct tctcttacaa atgagcaaat gcttaaactt
      901 ctgagtttac ttaatgaacc tgctgcacag tcttctaatg cctgtgctaa tatggaaggt
      961 aaaatttaca atatgaacac ttatttcaat gaaaacttca atagattctt taattcacac
     1021 tctacaatta atgataatca aggttggatt atagattcag gagcaaacca acatatgact
     1081 gtttcagaga aagaacttga caatataatt gatatttctg attttaatct taaagtttca
     1141 catcctaatg ggactgaagc acaagttagg aaaataggaa acttaaagct tacatcaaat
     1201 attattttat atgatgtgtt ggttgttctt ggatactgtg tgtctttgtt atctgttagc
     1261 aaattggttc aagataatga gttatttgtt ggttttgata gacataagtg ttatattcag
     1321 gatttgatgt caagaaacac cctggggact ggtagtttgc atagaggtct ttatttgttt
     1381 gataaaggtg ataatttgtg ttatagtact gctatttgtg attctgcttt gttatga
//
LOCUS       XM_071832351             528 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lachrymatory-factor
            synthase-like (LOC139842180), mRNA.
ACCESSION   XM_071832351
VERSION     XM_071832351.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..528
                     /gene="LOC139842180"
                     /note="lachrymatory-factor synthase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139842180"
     CDS             1..528
                     /gene="LOC139842180"
                     /codon_start=1
                     /product="lachrymatory-factor synthase-like"
                     /protein_id="XP_071688452.1"
                     /db_xref="GeneID:139842180"
                     /translation="MIDFNGDIGRNKIEISSMAKWEGMVSTTLTKANAAQIWPLFIDF
                     FNFHEWFPNLSTCYGVHGTNGEVGCTRYCSGSSLPNEDGGIDQVSWSRERLVAVDPNK
                     MSMTYEMVDCNIGYKSYLSTIKIIPNETDGCVVNWSFSLDQIDGLTREYLVKKYQDGL
                     DQTIKKMEDALVHNK"
     misc_feature    61..504
                     /gene="LOC139842180"
                     /note="Pyrabactin resistance 1 (PYR1), PYR1-like (PYL),
                     regulatory component of abscisic acid receptors (RCARs),
                     and related proteins; Region: PYR_PYL_RCAR_like; cd07821"
                     /db_xref="CDD:176863"
     misc_feature    order(67..69,73..75,79..81,109..117,121..126,151..153,
                     157..159,169..171,205..207,211..213,217..219,238..240,
                     271..273,277..279,283..285,292..294,313..315,319..321,
                     325..327,346..348,355..363,367..369,373..375,403..405,
                     409..411,415..417,421..423,442..456,460..468,472..480,
                     487..489)
                     /gene="LOC139842180"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:176863"
     misc_feature    order(154..159,163..165,241..246,343..348,439..444,
                     448..453,460..462,472..474)
                     /gene="LOC139842180"
                     /note="protein interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:176863"
     misc_feature    order(241..246,250..252)
                     /gene="LOC139842180"
                     /note="gate; other site"
                     /db_xref="CDD:176863"
ORIGIN      
        1 atgattgact ttaacggaga tattggacgg aataaaatag agatttcatc aatggctaaa
       61 tgggaaggta tggtttcaac cactctaaca aaagcaaatg cagctcaaat atggcctttg
      121 ttcatagact tcttcaactt ccacgaatgg tttcccaatt tatcgacttg ctatggggtc
      181 catggtacta acggtgaggt tggttgcaca cgatattgtt ctggttcctc acttccaaac
      241 gaagatggtg gcattgatca agttagttgg tcaagggagc gattagtagc tgttgatcca
      301 aacaagatgt ccatgaccta tgagatggtt gattgtaata ttgggtacaa gtcatatctt
      361 tcaacgatca agatcattcc taatgaaacc gacgggtgtg ttgttaattg gtcattttcg
      421 cttgatcaga tcgatgggtt aacacgagaa tatttggtta agaagtatca agatggactt
      481 gatcaaacta ttaagaaaat ggaggacgct ctagttcaca acaaatga
//
LOCUS       XM_071832352            1044 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gibberellin
            3-beta-dioxygenase 1-like (LOC139842181), mRNA.
ACCESSION   XM_071832352
VERSION     XM_071832352.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1044
                     /gene="LOC139842181"
                     /note="gibberellin 3-beta-dioxygenase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139842181"
     CDS             1..1044
                     /gene="LOC139842181"
                     /codon_start=1
                     /product="gibberellin 3-beta-dioxygenase 1-like"
                     /protein_id="XP_071688453.1"
                     /db_xref="GeneID:139842181"
                     /translation="MTSLSEAFGTYAIYDSTPLDFTSFDQVPETHQWVQLDKPIQKIQ
                     TDMGHVVTVQDTPIIPVIDLSDSNAMDLMKQACETLGVFQVINHGVPLEMVKKVESEA
                     RRLFGLSTNEKRKVLRSDTGKTGYGSAPISPYFDKCMWHEGFTIMGSCVDDAKVLWPN
                     DYHRFCDTMDAYQTQMKSLAHKLMVIILQLLNATQEEINWATSSHQGALQLNSYPSCP
                     NPNRTVGLAPHTDSLLLTILHQGGMHGLEIFDEGSGWTQVQPIEGAFVVNLGDLMHIF
                     SNAKFAVPFHRVMVNQLKQRISFAYFLGPRIESMVAPSSIFRNPCFKALRVKEYISLK
                     AKNYHNALSLIKK"
     misc_feature    1..1038
                     /gene="LOC139842181"
                     /note="gibberellin 3-beta-dioxygenase; Region: PLN02254"
                     /db_xref="CDD:215142"
ORIGIN      
        1 atgactagtc tctcagaagc tttcggcact tacgctatat acgatagcac ccctcttgac
       61 tttacctcat tcgaccaggt cccagaaact catcaatggg ttcaattaga caaacccatt
      121 caaaagattc aaaccgatat gggacacgtt gttacagttc aagatacacc gataatacca
      181 gttatcgatc tgagtgattc gaatgcaatg gatcttatga aacaagcgtg cgaaactttg
      241 ggtgtgtttc aagtgattaa ccatggtgtc cctttagaaa tggtcaaaaa ggtcgagtct
      301 gaggcacgaa ggctttttgg tctctcgact aacgaaaagc gcaaggtgtt gagatctgat
      361 actggaaaaa ctggttatgg ttcggctcct atatcacctt actttgataa gtgtatgtgg
      421 catgaagggt tcactattat gggctcttgt gttgatgatg ctaaagttct ttggccaaat
      481 gattatcacc gattttgtga cacaatggat gcttatcaaa cccaaatgaa atcacttgct
      541 cacaaactca tggttatcat acttcaatta ctaaatgcaa cacaagaaga aattaattgg
      601 gctacttcat ctcatcaagg tgcacttcag cttaactcct acccgtcttg ccctaacccg
      661 aaccgaaccg ttggtcttgc accacataca gactcacttc ttctaaccat tttgcaccaa
      721 ggtggcatgc atggtttaga aatatttgat gaagggtcag ggtggactca agtacaacca
      781 attgaaggtg catttgtagt taatcttggt gaccttatgc acattttttc aaatgcaaaa
      841 ttcgccgttc cttttcatcg agtaatggtt aaccaattga agcaacggat atcgtttgct
      901 tactttcttg gacctcggat tgaatctatg gtggctcctt cgtctatatt tcgaaaccct
      961 tgtttcaaag cattgcgtgt gaaggagtat ataagcttga aggcgaagaa ctaccataat
     1021 gctctatctt tgatcaaaaa ataa
//
LOCUS       XM_071832353            2079 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842182), mRNA.
ACCESSION   XM_071832353
VERSION     XM_071832353.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2079
                     /gene="LOC139842182"
                     /note="uncharacterized LOC139842182; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842182"
     CDS             1..2079
                     /gene="LOC139842182"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688454.1"
                     /db_xref="GeneID:139842182"
                     /translation="MLEASFKEEELWNAINECEPNKALRPDGFNLNFYKKFFWLIKGD
                     LMKALEWFHTQNEISKGCNASFFTLIPKVIDPISLGEYRPISFIESYYKIIAKILAKR
                     LQRVISKIIGYEQRAFMKGRYILDSVFVANEMVDYMKSQKRRCLMFKANFKKAFDRIN
                     WEFLFTVLDCMGFGKKWILWIKACLSSASISILVNGSPTNEFSLKRGVRQGDPISPYL
                     FIIAVEGLKVNLSKSCLYGVGIQKSHVEELASYLGCNAAKSLSFGGRLTLIKSVLTSL
                     PLYAFSLLRVPSNVINILEGLRRKFFWGGSGDNSKISWVNWNNILLPYESGRLNNESL
                     KAKNLALLGKWWWRFLIEPSALWVKVIKSIHGRDRGFGLFSSNHNLIKSSTWSNIRKI
                     GHEINNLDIQFTTSFVKTINKGESTLFWKDIWIGNQALRERFKRLFKLEKNEDASFPI
                     GSNDIDSWRYNSNGNGLFSTSLLTQQIDEKLLPDVQIPNATARNNFLPQKFEIFVGLL
                     CSSNCMMHRLATKDNLVLKGVLLPNLSCVWCEVNPETEFHVFAACAISRQIWANIGSW
                     IGIVIPTWNSMDDMWYWFNSLPIHGNKRYKKARINWSVWLQNPLDTIVELDKRGIDLD
                     SLLCPVCNNEVETIEHTLLHCSFARDLWDRVLRWWKIGPGLYQNLDHMFLGQKPMAPS
                     PTFSKLRQCI"
     misc_feature    202..>678
                     /gene="LOC139842182"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(451..468,628..630)
                     /gene="LOC139842182"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    631..633
                     /gene="LOC139842182"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <1747..1953
                     /gene="LOC139842182"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcttgaag cctcatttaa agaagaagaa ttatggaatg caatcaatga gtgtgaacca
       61 aataaagccc tcaggccgga tgggttcaac cttaatttct ataagaaatt cttttggcta
      121 attaaaggcg atctcatgaa agcacttgaa tggttccata cacaaaatga aatctcaaaa
      181 gggtgtaacg catccttttt cacgctcatc ccgaaagtaa tagatcccat atctcttgga
      241 gaatatcgtc cgattagttt tattgaaagc tactataaga tcattgccaa aatcttagca
      301 aaaaggcttc aaagagttat tagtaagatc atcggttatg aacaaagagc atttatgaaa
      361 ggaagatata ttcttgatag tgtttttgta gcaaacgaga tggttgatta catgaagagt
      421 caaaagagga gatgtctaat gtttaaagcc aacttcaaaa aggcttttga tagaattaat
      481 tgggaattct tatttacggt attagattgt atggggtttg gcaagaaatg gatattgtgg
      541 attaaagcat gcctttcttc agcttcaatc tcaatccttg tcaacggttc tccaacaaac
      601 gaattctcac ttaaaagggg agtacgtcaa ggtgatccca tctctccata tttgtttatt
      661 attgcggttg aaggcttgaa ggtgaatttg tcaaaaagtt gtctatatgg tgtagggatt
      721 caaaaatccc atgttgaaga gttagcatca tatcttggat gcaacgcggc aaagtcgtta
      781 tcatttggtg gccgtcttac cctaattaaa tcggtgctta ctagtctccc attatatgct
      841 ttctccctat tacgtgtccc atcgaatgtc atcaacatcc ttgaaggttt gagacgtaaa
      901 tttttttggg gcgggtcggg tgataattct aagatttcat gggtaaattg gaataatatt
      961 cttctaccat atgagagcgg gagattaaac aatgaatccc ttaaagccaa aaacttggct
     1021 ttattgggaa aatggtggtg gcgatttctt atcgagccaa gtgctctttg ggtaaaagtc
     1081 atcaaaagta tccacgggcg ggatagaggg tttggacttt tttcatcaaa tcacaatttg
     1141 atcaaaagct caacatggag taacattcga aaaattggtc acgagataaa taatcttgat
     1201 attcagttta ctacatcttt tgtaaaaaca attaacaagg gagaaagtac acttttttgg
     1261 aaagatatat ggataggtaa ccaagctctt agagaaagat tcaaaagatt gttcaagtta
     1321 gaaaagaatg aagatgcaag ctttccaatt gggtcaaatg atatcgattc atggagatac
     1381 aattctaacg gtaatgggct attctcaact tcacttctta ctcaacagat tgatgaaaag
     1441 ctactaccgg atgttcaaat tcccaacgct actgctcgaa ataatttttt acctcaaaag
     1501 ttcgaaattt tcgttggcct cttatgctca tccaactgta tgatgcatcg tcttgctaca
     1561 aaggataatc ttgtgctcaa gggtgtttta ctccccaatc tttcatgtgt gtggtgcgaa
     1621 gtgaatccag aaacagaatt tcatgtgttt gctgcttgtg ctattagtag acaaatatgg
     1681 gctaacattg gttcatggat tggcatcgtt attccgactt ggaactcgat ggacgacatg
     1741 tggtattggt tcaacagttt gcctattcac ggaaacaaac gatacaaaaa agctaggatt
     1801 aattggtccg tgtggttgca aaacccattg gacactatag tggagttaga caaacgcggt
     1861 atagatcttg actctctctt atgtccggtc tgtaataatg aagtcgaaac aatagaacat
     1921 acccttcttc attgctcatt tgcaagagat ctttgggata gagtacttag atggtggaag
     1981 atcggtccgg gtttatatca aaatcttgat catatgtttc ttggtcagaa accgatggct
     2041 ccatcaccca cattctcaaa gttacggcaa tgtatctag
//
LOCUS       XM_071832354             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842183), mRNA.
ACCESSION   XM_071832354
VERSION     XM_071832354.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139842183"
                     /note="uncharacterized LOC139842183; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842183"
     CDS             1..795
                     /gene="LOC139842183"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688455.1"
                     /db_xref="GeneID:139842183"
                     /translation="MDKTFKMLEFLVDDSDDEKIVSFVNRLTQKEDDGAASSSRVPRS
                     RIYIARDREDAAIRLYNDYFAESPVFPDKYFKRRFRMSRELFLRIVEGSNNDINVLNF
                     SPLFNTIKEGTAPPSPFEVNGRRYERGYYLGDGIYPEWAMLVKAPHNPTDEPRKKFKR
                     FQESARKDIERAFGVLQGRFLMLKTPARSIDFNKIRRHMYACVVLHNMIQENNGFVIG
                     WREERMIKRNPPKRLEWNLRDRDARIKEIRDKQVHKQLESDLTEHV"
     misc_feature    <274..642
                     /gene="LOC139842183"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataaaa ctttcaaaat gttagagttt cttgtggatg attcggatga cgaaaagatt
       61 gttagttttg ttaatagact gacgcaaaaa gaagacgatg gagcggcaag tagttctcgg
      121 gtccctcgat cccggattta tattgctagg gatcgagaag atgcggctat aaggttatac
      181 aatgattatt ttgcagagtc accggtgttt cccgacaaat attttaaacg acgttttcga
      241 atgagtcgtg agttatttct tcgaattgtt gaaggttcga acaacgacat taacgttttg
      301 aatttttctc cattgtttaa cactataaaa gaaggaacag ctccaccttc accctttgaa
      361 gtaaacggtc gtcgctacga aagagggtat tacttaggtg atggtatata cccagaatgg
      421 gctatgttgg taaaagcgcc tcataatcca actgacgaac ctcgtaaaaa atttaaaagg
      481 tttcaagaaa gtgcaagaaa agatattgag cgtgcatttg gagtattaca gggtagattt
      541 ttaatgctaa aaactccggc gagatctata gacttcaaca aaattagaag acatatgtat
      601 gcttgtgttg ttctacataa catgattcaa gaaaataacg gttttgttat tggatggcga
      661 gaagaaagaa tgataaaaag gaacccacca aaacgtttag aatggaattt gagggatcga
      721 gatgcaagga ttaaggaaat aagagataaa caagttcaca aacagttgga gtcagattta
      781 accgagcacg tttga
//
LOCUS       XM_071832355             753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842185), mRNA.
ACCESSION   XM_071832355
VERSION     XM_071832355.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..753
                     /gene="LOC139842185"
                     /note="uncharacterized LOC139842185; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842185"
     CDS             1..753
                     /gene="LOC139842185"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688456.1"
                     /db_xref="GeneID:139842185"
                     /translation="MANDENDGWEYLLDIDDSDLTQSVSVSKLTQTILVPTQSPPFPR
                     PLESPQLNRQKQKQPISPQRPVLRGSGSNKKNKLSYRTPGPAGVFQDAYELRNNENNV
                     VDDMSTQDFVREIINRPEKDDSFTLDPWLHAMEFAYPYGGRSDIASILRQRRFLPADQ
                     VVGVVKTCAKKFVGDLSVTLKDTTGTIRGTVSSKIIDGVHGKYEGVKGIREGAILVLQ
                     NYSIFCPSVKVKILNITRKALIKVFFKDGGST"
     misc_feature    <67..360
                     /gene="LOC139842185"
                     /note="Splicing factor (branch point binding protein) [RNA
                     processing and modification]; Region: MSL5; COG5176"
                     /db_xref="CDD:227503"
     misc_feature    472..738
                     /gene="LOC139842185"
                     /note="Homologous recombination OB-fold protein; Region:
                     HROB; pfam15072"
                     /db_xref="CDD:464486"
ORIGIN      
        1 atggccaatg atgagaacga tggatgggaa tacctacttg atattgatga ttccgatctc
       61 actcaatctg tatcagtttc aaaactcact caaaccatat tggtgcccac tcagtcgcca
      121 ccattccccc gacctttaga gtccccccaa cttaaccgtc aaaaacaaaa gcaacctatt
      181 tcaccacaac gacctgttct tcgcggttcc gggtctaaca aaaagaacaa attatcctac
      241 cgaacccctg gacccgctgg tgttttccaa gatgcgtatg aacttcgaaa taacgagaat
      301 aacgttgtgg atgacatgtc cacgcaagat tttgtaaggg aaataatcaa cagacctgaa
      361 aaggatgatt cgtttacact ggatccgtgg ctacatgcga tggagtttgc atatccgtac
      421 ggaggtagat ctgatatagc aagcattttg agacaacgta gatttttacc agctgatcaa
      481 gttgttggtg ttgttaagac ttgtgcaaaa aaatttgtcg gtgatctgtc tgtaacgctc
      541 aaagatacta cgggtactat tcgaggaaca gtatctagca agatcatcga tggtgtacat
      601 gggaagtatg aaggtgtaaa aggcatacgt gagggagcta ttttggtgct acaaaactat
      661 tctatctttt gccctagtgt gaaggttaaa atccttaaca ttacacgcaa ggcgttaatt
      721 aaggtgttct ttaaagacgg tggatctacg tag
//
LOCUS       XM_071832356            1947 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842186), mRNA.
ACCESSION   XM_071832356
VERSION     XM_071832356.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1947
                     /gene="LOC139842186"
                     /note="uncharacterized LOC139842186; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842186"
     CDS             1..1947
                     /gene="LOC139842186"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688457.1"
                     /db_xref="GeneID:139842186"
                     /translation="MKHTSKGKSISKQQLFNLFNQLNTLVEDTEQEHNDEAPSKYKQK
                     IAQPAIRAIAVDNLFALITGDKVIKPPAMAESTQYFIPRITEYPLPRNLGIPSIGVYD
                     GTTDPEDFLIMFESVMRLQHWEDETACHMFPNVLQKMGREWFASLPPRSITSFLDLRA
                     KFVMQFQSLRSCTLSHLDAHEITIQQNESLSNFMKRYTIECQKIPNIPESQLLSGFIF
                     CLDQHRFVSLIHALRYDVPKTLHQALVVAQKHLRAGEMGYPRVDNYHRNFRQQGGERN
                     RNDNYQRQRRYDNNYQKQQHGWKGNNHLNDNYHYRKPLDRHPLIMALTKTPKQILFTE
                     PIKETFHPPPPMKERQGPQSDKWCDFHEAYGHDTDNCKSVMREIIAKIKAGELKHLLP
                     GKQYRRNDPNKHFAWQGRVHHGGRHDWNRREERNDERDPTPERHIKVVWKEGDEYELD
                     RERRAEQWMYAPIIFHTIPNWRLSEEPVVISAVIANKRITRIYSDIGSEADILYLDCF
                     KDYPFIVQDRLRYTNLKIAGITGESMKAVGKVKLEVMLGAHPLVRTEIVDFTVLDGRS
                     RFNALFGRRTLQKFRAITSTPHAELRFPTPNGVAVVHSEYVGPVRERSVIYEAKVNFV
                     RGEPSRQLFSRNDVNGYFKPPNMR"
ORIGIN      
        1 atgaagcata ccagtaaagg aaagtcaatt tctaaacaac aattgtttaa cctattcaat
       61 cagttgaata ctttggtgga agatactgag caggaacaca atgatgaagc accatcaaaa
      121 tacaaacaga agattgcaca gcctgccatc cgtgcaatag ctgtagacaa tttgtttgct
      181 ttgattactg gagataaagt tattaaacca ccagcaatgg cagagtcaac ccagtatttt
      241 atccctcgaa ttacagaata tccattacca agaaacttgg gaattccatc aattggtgtt
      301 tatgatggaa caacagatcc agaagacttt cttatcatgt ttgaaagtgt tatgagattg
      361 cagcattggg aagatgaaac tgcgtgtcat atgtttccaa atgtattaca gaaaatgggt
      421 agagagtggt ttgctagttt gccaccaagg agtattacca gtttccttga tttaagggca
      481 aagtttgtga tgcaatttca aagtttgaga agctgtacgc tgtcgcatct tgatgcacat
      541 gaaataacaa tacaacagaa tgagtcacta agtaatttca tgaaacgcta caccatcgag
      601 tgtcaaaaga tacctaacat accagaatct cagcttcttt cagggtttat tttttgtctt
      661 gatcagcatc gcttcgtaag cctgattcac gcgttacggt atgatgtccc aaagacatta
      721 caccaagcat tggtcgttgc tcagaagcat ttaagggcag gagagatggg atatccaaga
      781 gttgataatt atcacagaaa tttcagacag caaggcggag agcggaacag gaatgacaat
      841 tatcagagac aacgtagata tgataacaat taccagaaac agcaacatgg ttggaagggg
      901 aataatcatc tgaatgacaa ttaccattac cggaagccat tagacaggca tccactcatc
      961 atggctttaa caaaaactcc aaaacaaatt ttattcaccg agcctattaa ggaaaccttc
     1021 caccctcctc caccaatgaa agagcgtcag ggaccacaaa gtgataagtg gtgtgatttt
     1081 cacgaggcat atgggcatga cactgacaat tgtaaatcag tgatgaggga aattattgca
     1141 aagattaaag ctggagagtt aaagcatcta ttaccaggaa aacagtatag gaggaatgat
     1201 ccaaataagc atttcgcttg gcaaggaagg gtgcatcacg gtggacggca tgattggaac
     1261 aggagagagg agagaaatga tgaaagggat ccaacccctg aaaggcacat aaaggttgtt
     1321 tggaaagagg gggatgagta tgaattagac agagaacgca gggcggaaca gtggatgtat
     1381 gctcctatta tatttcacac tatcccaaat tggcgtctgt cagaagagcc tgtggttatc
     1441 tcagctgtaa ttgcgaacaa gcgcattacc agaatctata gtgatatagg tagtgaggca
     1501 gacatcttat atttagattg tttcaaagat tatccgttca tcgtgcagga cagactccgc
     1561 tacacaaact tgaagatcgc tggcatcacg ggagaatcaa tgaaggcagt tggtaaggtt
     1621 aaattggagg taatgttggg agcacatcct ttggtcagaa cagaaatcgt ggacttcaca
     1681 gtccttgatg gcagatcaag gttcaacgct ctatttggaa gaagaacact tcaaaaattt
     1741 agagcaatta cttcaacacc acatgcagaa ttgcgattcc caacaccaaa tggtgtggct
     1801 gtggtgcact ctgagtacgt tggaccggta agggaaagat cagttattta tgaagcaaaa
     1861 gtaaactttg ttagaggtga accatcaagg cagttgttta gcagaaatga tgtgaatggg
     1921 tatttcaaac cgcccaacat gaggtag
//
LOCUS       XM_071832358             507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842188), mRNA.
ACCESSION   XM_071832358
VERSION     XM_071832358.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..507
                     /gene="LOC139842188"
                     /note="uncharacterized LOC139842188; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842188"
     CDS             1..507
                     /gene="LOC139842188"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688459.1"
                     /db_xref="GeneID:139842188"
                     /translation="MGSDTRPPMLFEGLFDEWKGRFDNFIDGKGEQTKNLWDSFLNGP
                     KGKDAKRSQANIDSRSIIMQALPHDMYKSVSSLKSGKELLDEITRQLEGYSQSDKIKL
                     DISLAMYEDYHQKPNEMLKDCYRCFSEVINELKKVGSEQRKSGAEHEIPKKAQCNLDT
                     IWKQLPCY"
ORIGIN      
        1 atgggctcgg atacccgtcc acctatgctg ttcgagggac tgttcgacga atggaaagga
       61 agatttgaca acttcatcga tggaaaggga gaacaaacca aaaatctttg ggactcattt
      121 ctcaatggcc caaagggcaa agatgccaag agatctcaag ccaacattga ctccaggtca
      181 atcatcatgc aagcccttcc ccatgacatg tataaatccg tcagctcact gaaatctgga
      241 aaagagcttc ttgatgaaat cactcgtcaa ctggaaggat atagccaatc cgacaaaata
      301 aaacttgaca tttctctcgc catgtatgag gactatcatc agaaacccaa tgaaatgctg
      361 aaggactgct acagatgctt cagtgaagtc atcaatgagc tgaaaaaggt cgggagtgaa
      421 caaagaaaat caggagctga acatgaaatt cctaaaaaag ctcaatgcaa cctggacacc
      481 atatggaaac aacttccgtg ctactaa
//
LOCUS       XM_071832359             561 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842189), mRNA.
ACCESSION   XM_071832359
VERSION     XM_071832359.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..561
                     /gene="LOC139842189"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139842189"
     CDS             1..561
                     /gene="LOC139842189"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688460.1"
                     /db_xref="GeneID:139842189"
                     /translation="MYLTASRPDIMFDVCLCAQFQANPRYSHYKAVMRIFSYLKGTAH
                     LGLWYPFGTGFHLTTFTDADYGGDQVNRKSTSGGLQFLGRKLVSWSSRKQNCISLSTS
                     ESEYIAVASCCSQVLWMQTQLLDYGFKFHKIPIYCDSQSAIAITSNPVHHSRTKHIDI
                     RYHFIKDHVEKGNVELYFIPTKKSTI"
     misc_feature    172..549
                     /gene="LOC139842189"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(184..195,298..306,313..315,412..414,490..492)
                     /gene="LOC139842189"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtatctca ctgcaagtag acccgatatc atgtttgatg tatgcttgtg tgcccaattt
       61 caagctaacc caagatattc tcactacaag gctgtcatga gaatcttcag ctatctcaag
      121 ggcaccgctc accttggact ctggtatccc tttgggactg gattccacct cacgacattc
      181 acggatgctg attatggagg tgaccaagtt aatcggaaaa gcacctccgg aggacttcaa
      241 ttccttggtc gtaaattagt cagttggtca tctcgcaagc aaaactgcat ctcactttct
      301 acttctgaat ctgagtacat tgcagtcgcg agttgttgct cccaagtctt gtggatgcaa
      361 acccaacttc ttgactatgg attcaaattc cacaaaatcc caatctactg tgactctcag
      421 agtgccattg ctattaccag caatcctgtt caccactctc gaaccaaaca cattgatatt
      481 cgctaccact tcataaagga tcatgttgag aaaggaaatg ttgaactata cttcatcccc
      541 acaaaaaaat caactatctg a
//
LOCUS       XM_071832360            2145 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842190), mRNA.
ACCESSION   XM_071832360
VERSION     XM_071832360.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2145
                     /gene="LOC139842190"
                     /note="uncharacterized LOC139842190; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842190"
     CDS             1..2145
                     /gene="LOC139842190"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688461.1"
                     /db_xref="GeneID:139842190"
                     /translation="MGECTGSGLLRVTKMESMGNRLRHLKIPKDEIVDATLNLDPHRV
                     NHYGIYEVELQRFNEDNISCMEGKNTEGELPKRGKTVFIKELTSRKERVVFFTEIEML
                     INCKHRNIVTLLGFCVDHSSKYLVVEHAPNGFLDEHLKNIKDNSINLTWVKRLKISLD
                     VANGLKYLHHEMEDQKMIINCSMESSSIGLDENWGAKIYYFGDSMLMSRNQDADVFSL
                     KRIYQIEYTDPEFEKNRIVTRGTDVYSFGVVLFELLCGRLANDPIFHKEDYRGLAYVA
                     QRRFNEKTVMEMIDPIIILGSSDYKFTLSRGANKNSLETFIEIAYQCLAETVDQRPTM
                     EVVVEELQKALLFQENNENDPRISLEDITKATGNFHVGNWIGKGGFGNVYRGKLPKGD
                     GFDTIVAKRLDKKSNQGEQQFRNELQILFNYKHENVIRLVGYCDEKYEKIIVYEYASR
                     GSLDRYLNDTTSLTWIKRLNICIDVATALEFLHGGVATQALVIHRDIKTENILLNDGW
                     KAKLADYGLSLISAINQKTEYIIANACGTEGYVDPLYRESGFLTMESDIYSFGVVLFE
                     ILCGRSTFSFNKHEGQFLPSFVKQRFKEGKHNEVVFEAIKSQIVPKALSTFQTIANRC
                     LNDNRENRPTAKEVLEELKRTREFQAVLQKSANSAENSMSSRFQILAEFSSFDLGKKS
                     INGRVNSVNRKESEKLLKIRKSGIKLGQRRTN"
     misc_feature    232..1029
                     /gene="LOC139842190"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1123..1932
                     /gene="LOC139842190"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1123..1134,1141..1143,1147..1149,1195..1197,
                     1198..1200,1285..1287,1333..1344,1486..1488,1498..1503,
                     1507..1509,1537..1542)
                     /gene="LOC139842190"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgggtgagt gcacaggtag tgggttactg agagttacaa agatggagtc tatgggaaac
       61 agattgaggc atttgaagat tccaaaagat gaaatagtag atgctacatt aaatttggac
      121 ccacatcgcg tgaatcacta tggtatatat gaagttgaac tccaacgttt taatgaagat
      181 aatatttcct gtatggaagg gaagaatacc gaaggtgaac tacccaagag agggaaaact
      241 gtatttataa aagaattaac gtcacgaaaa gaaagagtag tgttcttcac agaaattgaa
      301 atgcttatta actgtaagca tcggaacata gtcactctac ttggattttg tgttgatcat
      361 tcttctaagt accttgtcgt tgagcatgcc cctaatggat ttcttgatga acatcttaag
      421 aacatcaaag acaactcgat aaatcttact tgggttaagc gtttgaaaat ttcccttgac
      481 gttgcaaatg gattaaaata tcttcaccat gagatggaag atcagaagat gataattaac
      541 tgttctatgg agagcagcag cattgggttg gacgagaatt ggggggcgaa gatttattat
      601 tttggggact caatgctcat gtctcggaat caagatgcgg atgttttcag tttaaaaagg
      661 atttatcaaa ttgaatacac tgatccagaa tttgagaaaa atcgtatagt tacaagagga
      721 accgacgtat atagtttcgg agtagttttg tttgaacttc tttgtgggag gttagccaat
      781 gatccaattt tccataaaga agattacaga gggctagcat atgtggcaca acgacgtttc
      841 aatgagaaaa ctgtaatgga aatgatagat cctatcataa ttttagggag tagtgattac
      901 aagtttaccc tgagtagagg agccaataag aattctttgg aaacatttat agagattgca
      961 tatcaatgct tggcagagac tgtggaccaa cgtccaacaa tggaagtggt tgtcgaggag
     1021 cttcagaaag ccttattatt tcaagaaaac aatgagaatg accctagaat ttcacttgaa
     1081 gacataacaa aggcgacagg aaacttccat gttggcaact ggattggaaa aggaggcttt
     1141 gggaacgttt atagaggaaa acttcctaaa ggagatggat ttgatactat tgttgcaaag
     1201 cgattggata aaaaaagtaa tcaaggggaa caacaatttc ggaatgaact ccaaattctt
     1261 ttcaattata agcatgagaa tgtcatccgt cttgttggct attgtgatga aaaatatgaa
     1321 aaaatcatcg tttatgagta tgcgtcgaga ggaagccttg ataggtactt gaatgatact
     1381 actagtctta cttggattaa acggcttaac atatgcattg atgttgcaac cgcgttggag
     1441 ttccttcacg gaggagttgc aacacaggca ttggtgatac atagagatat caaaactgaa
     1501 aacattttat tgaatgatgg gtggaaagca aaattagctg attatgggct ttcgttgatt
     1561 agtgcaataa atcagaaaac agaatatatc attgctaatg cgtgcggcac agagggctac
     1621 gtggacccac tttaccgaga atctggcttc ttaaccatgg aatccgatat ttattcattc
     1681 ggtgttgttt tatttgagat cttatgtgga agatcaacat tttcgttcaa caaacatgaa
     1741 ggtcagtttc tacctagttt cgttaaacaa agatttaaag aaggaaaaca caatgaggtg
     1801 gtttttgagg caataaagtc acagattgtg ccgaaggcac tgagtacatt tcaaacaatt
     1861 gccaaccgat gcttgaatga caatagagaa aatagaccaa cagctaaaga agttctggaa
     1921 gaacttaaga ggacacggga gttccaagca gtgttgcaga aatcggctaa ctcggccgag
     1981 aactcgatga gttccaggtt tcaaattctt gccgagttct cgagctttga tttgggcaaa
     2041 aaatcgatca atggccgagt taactcagtc aacagaaaag aatcggaaaa gctattaaaa
     2101 atcagaaaat cagggataaa actcggtcaa cgaaggacga attga
//
LOCUS       XM_071832361             702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842192), mRNA.
ACCESSION   XM_071832361
VERSION     XM_071832361.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139842192"
                     /note="uncharacterized LOC139842192; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842192"
     CDS             1..702
                     /gene="LOC139842192"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688462.1"
                     /db_xref="GeneID:139842192"
                     /translation="MQELYEERKAADVWLLTAIGHDFSSGGFHGLKDEGTHHPQAIRS
                     EKLKEVVCKSLNTDNIFVNVPLVNVLAGMPNYGRFLKDLMAEKGEHEQTSSSFLEAEC
                     AAIVKKSDMPPKLGDTRPFIVPCRVNESELFRFLADSGASINLMPYSIYSRLGLGELK
                     PTNTGVRLIDQSVNKSIGIAENLDVKVGELEFPTDFVVVDMIQDKVVPIILDRPFLAT
                     AGNDAHSCTSVVQHL"
     misc_feature    367..651
                     /gene="LOC139842192"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(412..414,418..420,424..426,496..504,628..630)
                     /gene="LOC139842192"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    412..420
                     /gene="LOC139842192"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    412..414
                     /gene="LOC139842192"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(496..507,517..528)
                     /gene="LOC139842192"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcaagaat tgtatgaaga aagaaaagct gcggatgttt ggttgttaac tgcaattggg
       61 catgattttt ctagtggtgg tttccatggg ttgaaggatg agggaaccca ccacccgcaa
      121 gctatccgat cagagaagct aaaggaagtt gtttgtaagt ctttaaatac cgataatata
      181 tttgtgaatg ttcctttggt taatgttctt gcaggtatgc ccaattatgg gaggttctta
      241 aaggacttga tggcagagaa aggtgagcat gagcagacat catcctcgtt tcttgaagcg
      301 gaatgtgcag ctattgtgaa gaagagtgat atgccaccaa agttaggcga taccaggccg
      361 ttcattgtgc cctgtagagt gaatgagtct gagctattta gattcttagc agattcaggt
      421 gcaagtatta accttatgcc ttattctatt tattcacgtt tgggtttggg tgaacttaaa
      481 ccgaccaata caggagttag attgattgat cagtcagtta ataaatccat aggaattgct
      541 gagaacttag atgtaaaagt aggtgagttg gagttcccta cggactttgt ggttgtagac
      601 atgatacaag ataaggttgt accgatcatt ctggatagac catttttagc aactgcgggt
      661 aatgatgcgc atagctgcac atctgttgtg caacatcttt aa
//
LOCUS       XM_071832363             426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g67623 (LOC139842193), mRNA.
ACCESSION   XM_071832363
VERSION     XM_071832363.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..426
                     /gene="LOC139842193"
                     /note="putative F-box protein At1g67623; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139842193"
     CDS             1..426
                     /gene="LOC139842193"
                     /codon_start=1
                     /product="putative F-box protein At1g67623"
                     /protein_id="XP_071688464.1"
                     /db_xref="GeneID:139842193"
                     /translation="MDVRDRQPNMLEDLPSKMIVEILSKVGQDSSAQLFIAKSVCKAF
                     ERHSEHALVYKRLSFDRWCISPWGDPKLAHILFMAMYSGNPNAIFRYGLRAYFDSIYP
                     NIGLHSLEKPANMQLKEACYVYGLVLFASHQTQKKNLEL"
ORIGIN      
        1 atggatgtta gggatagaca accgaatatg ttagaagatc taccatcgaa aatgattgtt
       61 gaaatcttgt ctaaagttgg tcaagattca tcggcccaat tatttatagc aaagtcggtt
      121 tgcaaagcat ttgaaaggca ttccgagcat gccttggttt ataaaagact ttcatttgat
      181 aggtggtgta tctcaccttg gggagaccct aagttggccc atattttatt tatggctatg
      241 tattccggaa accctaatgc aattttccgc tatgggttaa gggcttattt tgattctata
      301 taccccaata taggactaca ttcattagaa aaacctgcaa atatgcaact taaagaagca
      361 tgttatgttt atggtttagt cttgtttgcc tcacaccaaa cacagaaaaa gaacctcgaa
      421 ttataa
//
LOCUS       XM_071832364             873 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139842194), mRNA.
ACCESSION   XM_071832364
VERSION     XM_071832364.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..873
                     /gene="LOC139842194"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139842194"
     CDS             1..873
                     /gene="LOC139842194"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071688465.1"
                     /db_xref="GeneID:139842194"
                     /translation="MTSTIREFAHLQIPLEDILKVTNNFDDRNIIGKGDFGKVYKGQL
                     LLSGKSVKIAARRLDRKYQQGVIEFWTEISVLSILRHENLVFVIGFCDEKNEKIIIKQ
                     RCAKGSLLMHINKERLTWIQRLKICVGVSRALSYIHNEVGRSYSVVHRNINSSTILLD
                     NKFVPRLSGFEYSVKYPVYKKEELLLLGAIGTTGYIDPAIPKTGGVNYKSDIYSFGVV
                     LWEILCGRMLLFQMWKRMVPKSRTSFSEVAYSCLKDERVHRPDMNSILLELENALELQ
                     LPHEQLVRSLFSLF"
     misc_feature    91..>678
                     /gene="LOC139842194"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(91..102,109..111,115..117,160..162,166..168,
                     253..255,301..312,451..453,463..468,472..474,502..507)
                     /gene="LOC139842194"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgacatcta caatcaggga atttgctcac ttacaaatcc cacttgaaga catactaaag
       61 gtcaccaaca actttgatga tagaaatatc atcggaaaag gtgatttcgg aaaagtgtac
      121 aagggacagc tgttgttgtc cgggaagtcc gtgaaaattg ccgctagaag attagatcgt
      181 aagtaccaac aaggagtcat tgagttctgg acagagatct ccgtgctttc gattctcagg
      241 catgaaaatc ttgtatttgt tatcgggttt tgtgatgaaa agaatgagaa gatcattata
      301 aagcaacgtt gtgcaaaggg aagtctcttg atgcatataa acaaagagag gctcacatgg
      361 atccaaagat tgaagatttg tgttggtgtt tcacgcgcat taagttacat ccataatgag
      421 gttggacgta gttactctgt tgtacaccgt aacattaaca gctccaccat attattggat
      481 aataaatttg tgcctaggtt atcgggtttc gaatactctg tcaaatatcc agtatataaa
      541 aaggaggagc ttctgctttt aggagctatc ggcacaacgg ggtatatcga cccagcaatt
      601 ccaaagactg ggggtgtaaa ctacaagtca gacatctact catttggcgt tgttttatgg
      661 gagatattat gcgggaggat gcttttattc caaatgtgga agcggatggt cccaaaatca
      721 cgaaccagct tctcagaagt tgcatattcc tgtttaaagg atgagcgtgt acaccgtcca
      781 gatatgaata gtattcttct tgaacttgag aatgcattgg aacttcagct gccacatgaa
      841 cagttggtaa gatccctctt ctcattgttt taa
//
LOCUS       XM_071832365             966 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842195), mRNA.
ACCESSION   XM_071832365
VERSION     XM_071832365.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..966
                     /gene="LOC139842195"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139842195"
     CDS             1..966
                     /gene="LOC139842195"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688466.1"
                     /db_xref="GeneID:139842195"
                     /translation="MIENGFRRGVIDQTLFIKESGDDIMLVQVFVDDIIFGSTDQKMV
                     DEFEEVMQKRFKISSLGAINFFLGLQVDQTEKGIFLHQSKYVADILSRFKMENERVVK
                     NPLSANHGITPENTGAKVNPTLYRAIIGSLMYLTASRLDIMFATCLCACYQAQPNVIH
                     MLAAKKIMRYLKGTPSLGLWYPRRDRFELTAYSDSDYGGCKIDFKSTSGGCQFLGSRL
                     VSWQCKKQTAVAQSTCEAEYIAAASCASQNPVNHSKTKHIGIKYHFIRDCYEKRLIDV
                     LQIGTQTQRADLFTKAFDRPPFLFLLNVLGVRERADVVSDKELLK"
     misc_feature    <1..315
                     /gene="LOC139842195"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    568..888
                     /gene="LOC139842195"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(580..591,694..702,709..711,790..792,871..873)
                     /gene="LOC139842195"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgatagaaa atggtttcag aaggggagtc atcgatcaga ctctgtttat caaagaaagt
       61 ggcgacgata tcatgctggt acaggttttt gtggacgaca tcatctttgg atctaccgat
      121 cagaagatgg ttgatgagtt tgaagaggta atgcagaaac gattcaagat tagttcactg
      181 ggggccatta atttcttttt agggttgcag gttgatcaaa cggaaaaagg catctttcta
      241 catcaatcga agtatgtagc tgacatcttg agccgattca agatggagaa tgaacgagtt
      301 gtcaagaatc ctttatcggc gaatcacggg attacaccag aaaatacagg ggcaaaggtc
      361 aatccgactc tttacagggc tattattggt tccttgatgt accttacagc atctcgactg
      421 gatatcatgt tcgcaacatg cttgtgcgct tgttatcaag cacaaccaaa tgtgattcat
      481 atgctcgctg caaagaagat catgcggtat ctaaagggga ctccgagttt gggcttatgg
      541 tatccacgga gggacagatt tgagttgaca gcatacagtg actcagacta tggaggatgc
      601 aaaatagatt tcaaatctac ctctggaggc tgtcagtttc tgggtagcag gcttgtgagt
      661 tggcagtgta agaaacaaac cgctgttgca caatccacgt gtgaagctga gtatattgct
      721 gcggcaagct gtgcatctca gaatcctgtt aatcattcta agaccaaaca catagggatc
      781 aagtaccatt tcattaggga ctgttatgaa aaacgattaa tagatgttct tcagataggt
      841 acacagaccc agcgtgctga cttgtttact aaagcttttg atcgaccgcc tttcctattc
      901 ttactaaatg ttttgggtgt gagagagagg gcagatgttg tgtccgataa ggagttattg
      961 aagtaa
//
LOCUS       XM_071832366             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842196), mRNA.
ACCESSION   XM_071832366
VERSION     XM_071832366.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139842196"
                     /note="uncharacterized LOC139842196; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842196"
     CDS             1..636
                     /gene="LOC139842196"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688467.1"
                     /db_xref="GeneID:139842196"
                     /translation="MTGNMSLLHDVKSIKGGPVSFAGDQGGFITAQGMISNSSVSFDK
                     VSFVKEMSNNLLSVSQVCDKRHKVLFDEQQCYIMRKDYKVPENMILMMAPRCQDLYIL
                     DMSKAYVKAASGQQAFVSKATEQESILWHKRMGHMSFRKMNHLVHNNLVEGVNVKGFN
                     IPDGCVPCKKGKQAKKSHTVKKHHSINTHLELLHMDLFGPINKKSVTGHSY"
     misc_feature    292..519
                     /gene="LOC139842196"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
ORIGIN      
        1 atgacgggga acatgtccct acttcatgat gttaaatcta taaaaggtgg acctgtttct
       61 tttgctggtg atcaaggagg atttattacg gctcagggga tgatctcaaa ttcatcagtt
      121 agttttgata aagtgagttt tgtcaaggaa atgtcgaata acctgctgtc agtttctcaa
      181 gtctgtgata aacgacataa agttctcttt gacgagcagc agtgttatat catgagaaaa
      241 gattacaaag ttccagagaa catgattcta atgatggcac caagatgtca agatctatat
      301 attctagata tgtctaaggc ttatgttaag gcagcttctg gacaacaagc tttcgtgtcc
      361 aaggctactg agcaggagtc tatcttatgg cataaacgga tgggtcatat gagcttcagg
      421 aaaatgaatc acttagttca caacaactta gtggaaggcg ttaatgtcaa agggtttaat
      481 attcccgatg ggtgtgtgcc gtgtaagaaa gggaagcaag caaagaaatc gcatactgtt
      541 aagaaacatc attccattaa tactcatcta gaacttcttc atatggatct ttttggtcca
      601 atcaacaaga agagtgtaac tggacattca tattga
//
LOCUS       XM_071832367            1161 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At2g23200 (LOC139842197), mRNA.
ACCESSION   XM_071832367
VERSION     XM_071832367.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1161
                     /gene="LOC139842197"
                     /note="probable receptor-like protein kinase At2g23200;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139842197"
     CDS             1..1161
                     /gene="LOC139842197"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At2g23200"
                     /protein_id="XP_071688468.1"
                     /db_xref="GeneID:139842197"
                     /translation="MQVCIRAVVVTGWCIRTVAVCNRAVVFLIGSGQRTARTIGFWVG
                     WDLALDLNQKKKNSEHLKIRLSDITFATDNFSDANRIGVTGSVNLYKAELEYFDKLNP
                     SYVEGENEVGQPKRRNTVIVKRILASDDKKEGEIFFMELEMLTTCKHPNIVTLVGFCD
                     EGSEMILVIEHASNGDLDDMYDSNNKHKKDGSVLTWAKRLKICLDIARGLKYLHYQME
                     GQKRIINCDIRSKNILLDENWGAKIANFEVSEFLPLNKDDDALHLDYVSGTPSYRDPE
                     YEETHRLKRESDVYSFGLVLFEVLSGEVNKTSLDKFIKLAYKCIAETQDQCPTMNTVV
                     HELEHMLLLQEEDQIFDEVQHKSPQTDRRHFSQTDCHVSRPTVDVAVILLTW"
     misc_feature    355..1014
                     /gene="LOC139842197"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgcaggttt gtatccgtgc ggttgtagta acaggatggt gtatccgcac ggttgcagtg
       61 tgtaaccgtg cggtagtgtt cttgattgga tctgggcaga gaacagcccg aacaataggg
      121 ttttgggttg gatgggatct agcactcgat ctgaatcaaa aaaaaaagaa ctcagaacac
      181 ttaaagattc ggctcagtga tataacgttt gccacggata acttctcgga cgcaaaccgg
      241 attggggtta ccggatctgt taacttatac aaagctgaac tcgagtattt tgataaacta
      301 aatccttcct acgtagaagg ggagaatgaa gttggtcaac ccaaaagacg gaatactgta
      361 attgtaaaac gtatcctcgc tagtgatgac aaaaaagaag gagaaatatt ctttatggaa
      421 cttgaaatgt taactacttg taagcatccc aacatagtca ccctagttgg attttgtgat
      481 gaaggatctg agatgatcct cgtcattgag catgcttcca atggagacct cgatgatatg
      541 tacgacagca acaacaaaca caagaaagat gggtctgttc ttacttgggc aaaacgttta
      601 aaaatttgcc ttgatatcgc acgtggattg aaatatcttc attatcagat ggaaggccaa
      661 aagagaataa taaactgtga tataaggagc aaaaatattt tgttggatga gaattggggg
      721 gcaaagattg ctaattttga ggtctccgaa ttcctgcctc tgaataaaga tgacgatgct
      781 cttcatctag attatgtttc tggcacgcct agttatcgtg atcctgaata cgaagagact
      841 catcgattaa aaagagaatc tgatgtatat agtttcggat tagttctgtt tgaggttcta
      901 agtggagaag taaacaaaac ctctttggat aaatttataa aacttgcata caaatgtata
      961 gcagaaactc aagatcagtg tccaacaatg aatactgtcg tccacgagct cgagcatatg
     1021 ttactcttac aagaggagga ccaaattttc gatgaagtac aacataaaag tcctcagact
     1081 gaccgccgcc acttcagcca gactgactgc cacgtgagca gaccgactgt cgacgtggca
     1141 gtcattctgc tgacgtggta g
//
LOCUS       XM_071832368             762 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842199), mRNA.
ACCESSION   XM_071832368
VERSION     XM_071832368.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..762
                     /gene="LOC139842199"
                     /note="uncharacterized LOC139842199; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842199"
     CDS             1..762
                     /gene="LOC139842199"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688469.1"
                     /db_xref="GeneID:139842199"
                     /translation="MKKYLKSQGLWKVIETDEDPPALRANPTVAQLRNYEDELLKKDK
                     ALTCLHSGLADQIFTSIMDLDTPKAVWDKIQDTYEGSNRVKAVRLLTLRREFELLKMN
                     DDELVKDYSSRIMDVVNQIRLHGDKISDQKVVEKIMISVPQKFEAKISAMEESCDVSM
                     LTVSELTSKLQAQEQRVSIRSEENVEGAFPVFFKNNKAGNSRQNTYKRGNYKGNKSSN
                     SRSSSSTLKKGTFPPCKVCQNKNHHEVDCWFEDKP"
     misc_feature    130..528
                     /gene="LOC139842199"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgaagaaat atttgaagtc tcaaggttta tggaaggtta tagagactga tgaagatcct
       61 ccagcactca gagcaaaccc aactgttgct caactaagaa attatgaaga tgagttgctg
      121 aagaaagata aggcacttac ctgtttacat tcaggacttg ctgatcaaat tttcacctca
      181 ataatggact tggacacacc gaaagctgtg tgggataaaa tccaagatac ctacgaaggt
      241 tctaatagag taaaagctgt cagattattg actctcagac gagagtttga attgttgaaa
      301 atgaacgatg atgaactcgt gaaagattat tcatcgcgaa taatggatgt tgttaatcaa
      361 attagacttc atggtgataa gatttcagac cagaaagtgg tggagaagat aatgataagt
      421 gttcctcaaa agtttgaagc caaaatttcc gcaatggaag aatcttgtga tgttagcatg
      481 cttacagttt ctgaactaac aagcaagctt caagcacaag aacaaagggt ctctataaga
      541 tccgaagaaa atgttgaagg tgcttttcca gtttttttca aaaataacaa ggctggaaat
      601 tcaagacaaa acacatataa gagaggaaat tataaaggaa ataaaagttc aaattcacga
      661 agctcctctt caacattaaa gaaaggtact ttccctccat gtaaagtttg tcaaaataaa
      721 aatcatcatg aagttgattg ttggttcgaa gataaaccat aa
//
LOCUS       XM_071832369            1899 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL6 (LOC139842200), mRNA.
ACCESSION   XM_071832369
VERSION     XM_071832369.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1899
                     /gene="LOC139842200"
                     /note="probable serine/threonine-protein kinase PBL6;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:139842200"
     CDS             1..1899
                     /gene="LOC139842200"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL6"
                     /protein_id="XP_071688470.1"
                     /db_xref="GeneID:139842200"
                     /translation="MQEDKLCRLHIPFDDITLATRHFSEKYRTTTHYQIFKGKLAKRR
                     KTIDVKRLISGATEQAKQVVKTETRMLVNCKRKNIVTLLGICNVNEIFNLLVIKHPSN
                     GFLDDHLRYIKDKPITLTWVKRLKICLDVARGLKYLHHEMEGQKMIINGSIKGSNIGL
                     FKNWGAKIVYFGNSVMLSPNQDEDALHLNNIEEISVYTDPEYQKNHKLRREIDVYSFG
                     VLLFEVLCGRLADDPIYVEESDMGLAYVAQRGFHERTLMEMIDPIIKEGIGDNMFAPS
                     RGPNLISLETFIKIACECLAESQDQRPTMKAVVEGLEKALFFQENNTDDPRISLEDIA
                     KATQNFHDDNCIGKGGFGNVYIGKVSKVDGFDTIVAKRLDTRGGQGEKQFRNELQILF
                     NYKHENIIRLLGYCDEKGAKVIVYEYASRGSLDRYLNDTHLTWMKRLNICLDVATALD
                     FLHGGVTTQSTVIHRDIKTENVLLNDEWKAKLADYGLSLISAINKETDYIIDHACGTE
                     GYVDPLYRKSGFLTMESDIYSFGVVLFEILCGRSTFWFRKHEGQFLPSFIKQRFEEGK
                     HNEVVFEAIRAQIVLKALSSFQTIADRCLNDDRENRPTAKEVMEQLKKTLELQENESS
                     VGTSLNLK"
     misc_feature    85..942
                     /gene="LOC139842200"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(85..90,97..99,103..105,142..144,148..150,238..240,
                     289..300,454..456,466..471,475..477,505..510)
                     /gene="LOC139842200"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1036..1842
                     /gene="LOC139842200"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1036..1047,1054..1056,1060..1062,1108..1110,
                     1111..1113,1198..1200,1246..1257,1396..1398,1408..1413,
                     1417..1419,1447..1452)
                     /gene="LOC139842200"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgcaggaag ataaattatg taggttacat attccattcg atgatataac gttggctaca
       61 agacactttt ctgaaaaata caggactacc acccactatc aaatatttaa aggtaaacta
      121 gccaagagac ggaaaactat agacgtaaaa cgcctcatct ctggagcgac tgagcaagca
      181 aaacaagtgg tgaagacaga aacgagaatg cttgttaact gtaagcgtaa gaatatagtc
      241 actctacttg gaatttgtaa cgtaaatgaa atttttaatt tgcttgtcat taagcatcct
      301 tctaatggat tccttgacga tcatcttaga tacatcaaag acaagcctat tactctaact
      361 tgggtgaaac gtttgaaaat ttgccttgat gttgcacgtg gtttgaaata tcttcaccat
      421 gagatggaag gccagaagat gatcataaac ggttctataa aaggaagcaa cattggattg
      481 ttcaagaact ggggggcgaa gattgtttac tttgggaact cagtgatgtt gtctccaaat
      541 caagatgaag atgctctcca tctcaataac attgaggaaa taagtgtata cactgatcca
      601 gaatatcaga agaaccataa attgagaaga gaaatagatg tatatagttt cggagtactt
      661 ttatttgaag ttctttgtgg gaggttagcc gatgacccaa tttacgttga agagagtgac
      721 atggggctag cttatgtggc tcaacgaggt ttccatgaga gaacacttat ggaaatgata
      781 gatcctatca taaaggaagg aattggtgac aacatgtttg ccccaagtag aggaccaaat
      841 ctgatttctt tggaaacatt tataaaaatt gcgtgtgaat gtttggcaga atctcaagat
      901 caacgtccaa caatgaaagc ggttgtcgag gggcttgaga aagccttatt cttccaagaa
      961 aacaatacgg atgaccccag aatttcactt gaagatatag caaaggcaac acagaacttc
     1021 catgatgata attgcattgg aaaaggaggc tttgggaacg tttatatagg aaaagtatct
     1081 aaagttgatg gattcgatac cattgttgca aagcgattgg atacaagagg gggtcaaggg
     1141 gaaaaacaat ttcggaatga actccaaatt cttttcaatt acaagcatga aaatatcatc
     1201 cgtcttcttg gctattgtga tgaaaaaggt gcaaaagtca ttgtttatga gtatgcatcg
     1261 agaggaagcc ttgataggta cttgaatgat actcatctta catggatgaa acggcttaac
     1321 atatgccttg atgttgcaac tgcattggat ttccttcatg gaggagttac aacacagtca
     1381 acagtgatac atagagacat caaaacggaa aatgttctat taaatgatga gtggaaggca
     1441 aaacttgctg attacggact ttccttgata agtgcaataa ataaggaaac agattatatc
     1501 atcgatcatg catgcggcac agagggatac gtggacccac tttaccgaaa atctggtttc
     1561 ttaaccatgg aatcagatat atattcattc ggtgttgttt tatttgagat cttgtgtgga
     1621 agatcaacgt tttggttccg caaacatgaa ggtcagtttc ttcctagttt tattaaacag
     1681 agattcgaag aaggaaaaca caatgaggtc gtatttgagg ctataagggc acagattgta
     1741 ctgaaagcat tgagttcatt tcaaacaatc gccgaccggt gcttaaatga tgatagagaa
     1801 aatcgaccaa cagctaaaga agttatggaa caacttaaga agacattgga actccaagag
     1861 aatgaatcga gtgtaggaac ctcgttaaac ctgaaatga
//
LOCUS       XM_071832370             594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            ANXUR1 (LOC139842201), mRNA.
ACCESSION   XM_071832370
VERSION     XM_071832370.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..594
                     /gene="LOC139842201"
                     /note="receptor-like protein kinase ANXUR1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139842201"
     CDS             1..594
                     /gene="LOC139842201"
                     /codon_start=1
                     /product="receptor-like protein kinase ANXUR1"
                     /protein_id="XP_071688471.1"
                     /db_xref="GeneID:139842201"
                     /translation="MSRGKSVFETPFCKHVTKYYYFKKKKKNSYIVTSTTPPYYWIAN
                     LCPSYRVSNTVKYSVDRKEVHLSDAIGTTGYVDLEIPKTGGVTHKSDIYSFGVVLWEI
                     LCGRKAFIPNADEDNMFLASLVRFHYENDTVNDIILPDLRNHMSEKSLTSFSNISYSC
                     INKERIHGPDMNSITHELENALELQVSYDNLVTSLFL"
     misc_feature    <175..540
                     /gene="LOC139842201"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgtcacgcg gcaaatcggt gtttgaaact ccgttttgta aacatgttac caaatattac
       61 tatttcaaaa aaaaaaagaa aaattcatac atcgtaacgt caacaactcc accatattat
      121 tggatagcaa atttatgccc aagttatcgg gtttcgaata ctgtcaaata ttcagtagac
      181 cgaaaggagg ttcacctttc agatgctatt ggcacaacag ggtatgtgga cctagaaatc
      241 ccgaagaccg gaggtgtgac ccacaagtca gacatctact catttggcgt tgttttatgg
      301 gagatattat gtgggaggaa agcatttatt ccaaatgcgg atgaggataa tatgtttttg
      361 gcatcattgg tcagatttca ttatgaaaac gacacagtga atgatataat ccttccagat
      421 ttaaggaatc atatgtccga aaaatcactc actagcttct caaacatatc atattcttgc
      481 ataaataaag aacgaataca cggtcctgat atgaacagta ttacacatga acttgagaac
      541 gcattggaac ttcaggtctc atatgataat ctggtaacat ccttattcct ttag
//
LOCUS       XM_071832372            1842 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842202), mRNA.
ACCESSION   XM_071832372
VERSION     XM_071832372.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1842
                     /gene="LOC139842202"
                     /note="uncharacterized LOC139842202; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842202"
     CDS             1..1842
                     /gene="LOC139842202"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688473.1"
                     /db_xref="GeneID:139842202"
                     /translation="MEDQKMIINCNIRSENIVLDENCGAKIEINKEFMTTSTKFERER
                     DVYSFGVVLLEVLLGKPVDTNFIRETLKLDLADYLQTYINEGTTDWKVDSTINRESGL
                     NKASLKKFIEITSVCLENTPDHRPKMNVVVDELEQALLLQVEDQIFDEQLPLLGLRNF
                     SSPYWDLDDDNDNDVDDYDDEDKLIYAKHLMHLKIPHDEILEAVKTWESRFERHYVIH
                     EGELPKVEKNVYVKEFMPGKKANQMFITEIEMLNNCKHPNIVTLHGFCPERAYKFLVV
                     DHASNGFLSDHLKNINNDDKPSNLTWVKRLKICLDVARGLKYLHHEMEDQKMIINCCI
                     QSMLLSRNQDGEVPHLKRIEETVYADPVFQKNHKFTRKSDVYSFGVLLLEVLCGRLAD
                     DPTYIEESDRGIAYVAQRHFHEQTLTELIDPNIKEGIRDYKFTLNRGPNQNSLETFIK
                     IAYECLAETQDQRPTMKVVVEELEHALFFQIELQRSRDRFYSFGHLDASKAKGGFGNV
                     YRGKVPNGDGFDTIVAKRLDTSGGQGEKQFRNELQILVKYKHENVIRLVGYCDEKDEK
                     VIVYEYASRGSLDRYQNDARLTWTKRLNICIDVATALEFLHGGLSTC"
     misc_feature    <19..411
                     /gene="LOC139842202"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    730..1422
                     /gene="LOC139842202"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1501..>1836
                     /gene="LOC139842202"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atggaagacc aaaaaatgat cataaattgt aatataagaa gtgaaaatat tgtgttggat
       61 gagaattgcg gggcaaagat tgaaattaac aaagaattta tgacgacaag tactaagttt
      121 gaaagagaaa gagatgtata tagtttcgga gtagttttgt tagaggttct acttgggaaa
      181 ccagtcgata ccaactttat ccgagagaca cttaaactag atttggctga ttatttgcaa
      241 acatacatca acgaaggaac tacagattgg aaggtagatt ctacaatcaa tagagaaagt
      301 ggactcaaca aagcttcttt aaagaaattt attgaaatta cgtctgtgtg tttagagaac
      361 actccagacc atcggccaaa aatgaatgtc gttgtcgatg agctcgagca ggctttactc
      421 cttcaagtgg aggaccaaat ttttgatgaa caattaccac ttctaggcct tcgtaacttt
      481 agctctcctt attgggatct tgatgatgat aatgacaatg acgttgatga ttatgatgat
      541 gaagataaac taatatatgc taaacatttg atgcatttga agattccgca cgatgaaata
      601 ctagaagctg taaaaacatg ggaatcacgt tttgagagac actatgttat acatgaaggc
      661 gaactaccca aagttgagaa aaatgtatat gtaaaagaat tcatgccagg taagaaagca
      721 aatcaaatgt tcatcacaga aattgaaatg cttaataact gtaagcatcc caacatagtc
      781 actctacatg ggttttgtcc tgaacgtgct tataagttcc ttgtcgttga tcatgcttct
      841 aatggatttc tcagtgatca tcttaagaac atcaacaacg acgacaagcc aagtaatctt
      901 acatgggtaa aacgtttgaa aatatgtctt gatgttgcac gtggattgaa atatctccac
      961 catgaaatgg aagatcaaaa gatgatcatt aactgttgta tacagagcat gctcttgtcg
     1021 aggaatcaag atggtgaggt tcctcatctt aaaaggattg aggaaactgt gtacgctgat
     1081 ccagtatttc aaaagaacca taaatttaca agaaaatcag atgtatatag ttttggagta
     1141 cttttgttag aagttctttg tgggaggtta gccgatgacc caacatacat tgaagagagt
     1201 gacagaggga tagcttatgt ggcacaacga cattttcatg agcagacact aacggaattg
     1261 atagatccta acataaagga aggaattcgg gattacaagt ttaccctaaa tagaggacct
     1321 aatcagaatt ctttggaaac atttattaaa attgcgtatg aatgcttagc agaaactcag
     1381 gaccaacgtc caacaatgaa agttgttgtg gaggagcttg agcacgcctt attcttccaa
     1441 atagaacttc agaggtcccg tgaccggttc tactcttttg gtcacctcga tgctagtaag
     1501 gcaaaaggag gctttggaaa cgtttataga ggaaaagttc ctaatggtga tggattcgat
     1561 accattgttg cgaagcgatt ggatacatca ggtggtcaag gggaaaaaca atttcggaat
     1621 gaactccaaa ttcttgtcaa gtataagcac gagaatgtca ttcgtttggt tggctattgt
     1681 gatgaaaagg atgaaaaagt catcgtttat gagtatgcat caagaggaag ccttgatagg
     1741 taccaaaatg atgctcgtct tacttggacg aaacgactta acatatgcat tgatgttgca
     1801 actgcattgg agttccttca tggaggactt tcaacatgtt ga
//
LOCUS       XM_071832373             762 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842203), mRNA.
ACCESSION   XM_071832373
VERSION     XM_071832373.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..762
                     /gene="LOC139842203"
                     /note="uncharacterized LOC139842203; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842203"
     CDS             1..762
                     /gene="LOC139842203"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688474.1"
                     /db_xref="GeneID:139842203"
                     /translation="MKTYLKSQGLWKVVETDEDPPALRANPTVAQLRNYEDELLKKDK
                     ALTCLHSGLADQIFTSIMDLDTPKAVWDKIQDTYEGSNRVKAVRLLTLRREFELLKMN
                     DDELVKDYSSRIMDVVNQIRLHGDKISDQKVVEKIMISVPQKFEAKISAMEESCDVSM
                     LTVSELTSKLQAQEQRVSIRSEENVEGAFPVFFKNNKAGNSRQNTYKRGNYKGNKSSN
                     SRSSSSTLKKGTFPPCKVCQNKNHHEVDCWFEDKP"
     misc_feature    130..528
                     /gene="LOC139842203"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgaagacat atttgaagtc tcaaggttta tggaaggttg tagagactga tgaagatcct
       61 ccagcactca gagcaaaccc aactgttgct caactaagaa attatgaaga tgagttgctg
      121 aagaaagata aggcacttac ctgtttacat tcaggacttg ctgatcaaat tttcacctca
      181 ataatggact tggacacacc gaaagctgtg tgggataaaa tccaagatac ctacgaaggt
      241 tctaatagag taaaagctgt cagattattg actctcagac gagagtttga attgttgaaa
      301 atgaacgatg atgaactcgt gaaagattat tcatcgcgaa taatggatgt tgttaatcaa
      361 attagacttc atggtgataa gatttcagac cagaaagtgg tggagaagat aatgataagt
      421 gttcctcaaa agtttgaagc caaaatttcc gcaatggaag aatcttgtga tgttagcatg
      481 cttacagttt ctgaactaac aagcaagctt caagcacaag aacaaagggt ctctataaga
      541 tccgaagaaa atgttgaagg tgcttttcca gtttttttca aaaataacaa ggctggaaat
      601 tcaagacaaa acacatataa gagaggaaat tataaaggaa ataaaagttc aaattcacga
      661 agctcctctt caacattaaa gaaaggtact ttccctccat gtaaagtttg tcaaaataaa
      721 aatcatcatg aagttgattg ttggttcgaa gataaaccat aa
//
LOCUS       XM_071832374            1179 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative receptor-like
            protein kinase At5g39000 (LOC139842204), mRNA.
ACCESSION   XM_071832374
VERSION     XM_071832374.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1179
                     /gene="LOC139842204"
                     /note="putative receptor-like protein kinase At5g39000;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins"
                     /db_xref="GeneID:139842204"
     CDS             1..1179
                     /gene="LOC139842204"
                     /codon_start=1
                     /product="putative receptor-like protein kinase At5g39000"
                     /protein_id="XP_071688475.1"
                     /db_xref="GeneID:139842204"
                     /translation="MGLAYVAQRGFHERTLMEMIDPIIKEGSGDNMFAPSRGPNLISL
                     ETFIKIACECLAESQDQRPTMKAVVEGLEKALFFQENNTDDPRISLEDIAKATQNFHD
                     DNCIGKGGFGNVYIGKVSKVDGFDTIVAKRLDTRGGQGEKQFRNELQILFNYKHENII
                     RLLGYCDEKGAKVIVYEYASRGSLDRYLNDTHLTWMKRLNICLDVATALDFLHGGVTT
                     QSTVIHRDIKTENVLLNDEWKAKLADYGLSLISVINKETDYIIDHACGTEGYVDPLYR
                     KSGFLTMESDIYSFGVVLFEILCGRSTFWFRKHEGQFLPSFIKQRFEEGKHNEVVFEA
                     IRAQIVLKALSSFQTIADRCLNDDRENRPTAKEVMEQLKKTLELQENESSVGTSLNLK
                     "
     misc_feature    <37..222
                     /gene="LOC139842204"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    316..1122
                     /gene="LOC139842204"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(316..327,334..336,340..342,388..390,391..393,
                     478..480,526..537,676..678,688..693,697..699,727..732)
                     /gene="LOC139842204"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggggctag cttatgtggc tcaacgaggt ttccatgaga gaacacttat ggaaatgata
       61 gatcctatca taaaggaagg aagtggtgac aacatgtttg ccccaagtag aggaccaaat
      121 ctgatttctt tggaaacatt tataaaaatt gcgtgtgaat gtttggcaga atctcaagat
      181 caacgtccaa caatgaaagc ggttgtcgag gggcttgaga aagccttatt cttccaagaa
      241 aacaatacgg atgaccccag aatttcactt gaagatatag caaaggcaac acagaacttc
      301 catgatgata attgcattgg aaaaggaggc tttgggaacg tttatatagg aaaagtatct
      361 aaagttgatg gattcgatac cattgttgca aagcgattgg atacaagagg gggtcaaggg
      421 gaaaaacaat ttcggaatga actccaaatt cttttcaatt acaagcatga aaatatcatc
      481 cgtcttcttg gctattgtga tgaaaaaggt gcaaaagtca ttgtttatga gtatgcatcg
      541 agaggaagcc ttgataggta cttgaatgat actcatctta catggatgaa acggcttaac
      601 atatgccttg atgttgcaac tgcattggat ttccttcatg gaggagttac aacacagtca
      661 acagtgatac atagagacat caaaacggaa aatgttctat taaatgatga gtggaaggca
      721 aaacttgctg attacggact ttccttgata agtgtaataa ataaggaaac agattatatc
      781 atcgatcatg catgcggcac agagggatac gtggacccac tttaccgaaa atctggtttc
      841 ttaaccatgg aatcagatat atattcattc ggtgttgttt tatttgagat cttgtgtgga
      901 agatcaacgt tttggttccg caaacatgaa ggtcagtttc ttcctagttt tattaaacag
      961 agattcgaag aaggaaaaca caatgaggtc gtatttgagg ctataagggc acagattgta
     1021 ctgaaagcat tgagttcatt tcaaacaatc gccgaccggt gcttaaatga tgatagagaa
     1081 aatcgaccaa cagctaaaga agttatggaa caacttaaga agacattgga actccaagag
     1141 aatgaatcga gtgtaggaac ctcgttaaac ctgaaatga
//
LOCUS       XM_071832375             483 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative receptor-like
            protein kinase At5g39000 (LOC139842205), mRNA.
ACCESSION   XM_071832375
VERSION     XM_071832375.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..483
                     /gene="LOC139842205"
                     /note="putative receptor-like protein kinase At5g39000;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:139842205"
     CDS             1..483
                     /gene="LOC139842205"
                     /codon_start=1
                     /product="putative receptor-like protein kinase At5g39000"
                     /protein_id="XP_071688476.1"
                     /db_xref="GeneID:139842205"
                     /translation="MSRGKSVFETPVCHVTLPCGQIDRKEVHLSDAIGTTGYVDLEIP
                     KTGGVTHKSDIYSFGVVLWEILCGRKAFIPNADEDNMFLASLVRFHYENDTVNDIILP
                     DLRNHMSEKSLTSFSNISYSCINKERIHGPDMNSITHELENALELQVSYDNLVTSLFL
                     "
     misc_feature    <64..429
                     /gene="LOC139842205"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgtcacgcg gcaaatcggt gtttgaaact ccggtttgcc atgtcactct gccatgtggg
       61 caaatagacc gaaaggaggt tcacctttca gatgctattg gcacaacagg gtatgtggac
      121 ctagaaatcc cgaagaccgg aggtgtgacc cacaagtcag acatctactc atttggcgtt
      181 gttttatggg agatattatg tgggaggaaa gcatttattc caaatgcgga tgaggataat
      241 atgtttttgg catcattggt cagatttcat tatgaaaacg acacagtgaa tgatataatc
      301 cttccagatt taaggaatca tatgtccgaa aaatcactca ctagcttctc aaacatatca
      361 tattcttgca taaataaaga acgaatacac ggtcctgata tgaacagtat tacacatgaa
      421 cttgagaacg cattggaact tcaggtctca tatgataatc tggtaacatc cttattcctt
      481 tag
//
LOCUS       XM_071832376            1026 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides receptor-like protein kinase
            HERK 1 (LOC139842206), mRNA.
ACCESSION   XM_071832376
VERSION     XM_071832376.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1026
                     /gene="LOC139842206"
                     /note="receptor-like protein kinase HERK 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 36 Proteins"
                     /db_xref="GeneID:139842206"
     CDS             1..1026
                     /gene="LOC139842206"
                     /codon_start=1
                     /product="receptor-like protein kinase HERK 1"
                     /protein_id="XP_071688477.1"
                     /db_xref="GeneID:139842206"
                     /translation="MASTIRELTHLQIPLEEVLKATNNFDDSNIIGAGDFGKVYKGRL
                     FRCGNLVKIAAHRLHRKDQQGVTEFWREISMLSILNHENIVSIIGFCDEQNEKIIINQ
                     HCEKGSLLMHINKERLTWIQRYRLCVGVARAIHYMHDDDKRGYSIIHRNINSSTILLD
                     NNYVPRLSGFEYSVKHVVDRKEQVFHSDAIGTTGYMDPEITKNGGVTLKSDIYSFGIV
                     LWEVLCGRKAFIPNEDEDQRFLSSLARSHYENYTLKDIIHPDLWNHMSQKSLTSFSKA
                     AYSCIKNERVHRPDINHIVHEIEEALEFQVSFDNLVGLFDLFLLFVYYFCSIHHSNLS
                     DVPYNFV"
     misc_feature    91..900
                     /gene="LOC139842206"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(91..102,109..111,115..117,160..162,166..168,
                     253..255,301..312,451..453,463..468,472..474,502..507)
                     /gene="LOC139842206"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggcatcta caatcaggga gttgactcac ttacaaattc cacttgaaga ggtacttaag
       61 gccaccaaca actttgatga tagcaatatc atcggggcag gtgattttgg aaaagtgtac
      121 aagggacggc tctttcggtg tggtaatttg gtgaaaattg ctgctcatag attacatcgt
      181 aaggaccaac aaggagtcac tgagttttgg agggagatct ctatgctttc gattctcaat
      241 catgaaaata ttgtctctat tatcgggttc tgtgacgaac aaaatgagaa gatcattata
      301 aaccagcatt gtgaaaaggg aagtctcttg atgcatataa acaaagagag actcacatgg
      361 atccaaagat ataggttatg tgttggagtt gcgcgcgcaa tacactacat gcacgatgat
      421 gacaaacgcg gttactctat catacatcgt aacataaata gctccaccat attattggat
      481 aataactatg tccctaggtt atcgggtttc gaatactctg tcaaacatgt cgtggaccga
      541 aaggagcagg ttttccattc agacgctatt ggcacaactg ggtatatgga cccagaaatt
      601 actaaaaatg gaggtgtgac gttgaagtca gacatctact catttggcat tgttttatgg
      661 gaggtgttat gtgggaggaa agcatttatt ccaaatgaag atgaggatca gaggttttta
      721 tcatcattgg ccagatctca ttatgaaaac tacacactga aagatataat ccatcctgat
      781 ctatggaatc atatgtccca aaaatcactc accagtttct cgaaagcagc atattcttgc
      841 ataaagaatg agcgagtaca tcgtccagat ataaaccata ttgtccatga aatcgaggag
      901 gcattggaat tccaagtgtc atttgataat ttggtaggat tattcgatct ctttctcctt
      961 tttgtttatt atttttgtag cattcatcat agtaatttgt cagacgttcc ttataatttc
     1021 gtatag
//
LOCUS       XM_071832377            2700 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842207), mRNA.
ACCESSION   XM_071832377
VERSION     XM_071832377.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2700
                     /gene="LOC139842207"
                     /note="uncharacterized LOC139842207; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842207"
     CDS             1..2700
                     /gene="LOC139842207"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688478.1"
                     /db_xref="GeneID:139842207"
                     /translation="MLSILNHENIVSIIGFCDEQNEKIVINKRCAKGSLLMHINKERL
                     TWIQRFRICVGVARALHYMHDDDERSYSVIHRNINSSTILLDNNFVPRLSGFEYSVKH
                     VVDQKEHVLLSNAIGTKVYMDPEITKNGGVTLKSDIYSFGIVLWEVLSGRKAFIPNED
                     EDKRFLASLVGSHFENYTLKYIIHPDLWNHLSQRSLSSFSNVAYYCIKNERVHRPYMQ
                     SIIHELQKALEFQVSFDNSGNKLKHLKFPVDELGDAIIHTTTSYRKNYDILDVEVRHF
                     IRHDISSVEGKNKEGELPKRVKVVFMKRLSSRKERVAFLTEVKVLSNCNHRNIVTLLG
                     IFANDDFDYLVIEHAPNGFLHNHLETIKNNPINLTWVKRLKISLDVANGLKYLHHEMD
                     DQKVILIRSLASSIIGLDENWGAKIYFFENSMIVSRNQDEGVFKARGITETVYTDPEF
                     VKNRIVSRGGDVYSFGVILFELLCGRVAYDPVFRKEDYDRALAYVARRRRFTEKTVME
                     MIDPIIKEGSTGDYKFTLSRGANKDSLETFIKIAYECLAETVDQRPTMKVVVEGLEKA
                     LLFQENIENNPRVSLEEITQATGNFHVSNLIGKGGFGKVYKGEIQKGDEFDTIVAKRL
                     DKTSGQEEQQFQNELQVLFNYKHDNVIRLVGYCDEKDEKVIVYEYASRGSLNNYLNDT
                     TNLTWIKRLNICIDVAATLEFLHGGVTTHVIHRDIKTENILLNYEWKAKLADFGLSLI
                     SAINQKTEYVIANECGTEGYVDPLYRKFGFLTMESDIYSFGVVLFEILYGKSTFWFRK
                     HEGQFLPSFIKQRFEEGRHNEVVFEAIKEQIVPKALSAFQEISYRCLNDDRENRPTAK
                     EVLEQLKKTLELQRNSGWPGEIKHDLPYAQDRQNGSPKLGFYA"
     misc_feature    1..678
                     /gene="LOC139842207"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    892..1695
                     /gene="LOC139842207"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1789..2592
                     /gene="LOC139842207"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1789..1800,1807..1809,1813..1815,1861..1863,
                     1864..1866,1951..1953,1999..2010,2146..2148,2158..2163,
                     2167..2169,2197..2202)
                     /gene="LOC139842207"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgctttcga ttctcaatca tgaaaatatt gtctctatta ttgggttttg tgacgaacaa
       61 aatgagaaga tcgttataaa caagcgttgt gcaaagggaa gtctcttgat gcatataaat
      121 aaagagagac tcacatggat ccaaagattt aggatatgtg ttggtgttgc gcgagcatta
      181 cactacatgc acgacgatga cgaacgcagt tactctgtca tacatcgtaa cataaatagc
      241 tccaccatat tattggataa taactttgtc cctaggttgt cggggtttga atactctgtc
      301 aaacatgttg tagaccaaaa ggaacatgtt ctcctttcaa acgctatcgg cacaaaagtg
      361 tatatggacc cagaaattac taaaaatgga ggtgtgactc tgaagtcaga catatactca
      421 tttggcattg ttttatggga agtgttaagt gggaggaaag catttattcc aaatgaagat
      481 gaggataaga ggtttttagc atcgttggtt ggatcacatt ttgaaaacta tacactgaaa
      541 tatataatcc atcctgatct atggaatcat ctgtctcaga gatcactctc cagcttctca
      601 aacgtggcat attattgcat aaagaatgag cgagtacacc gtccatatat gcagagtatt
      661 atccatgaac ttcagaaggc attggaattt caggtgtcgt ttgataattc gggaaacaaa
      721 ctgaagcatt tgaagtttcc agtagatgaa ttaggagatg ccataataca tacgaccaca
      781 agttacagaa aaaactacga catactcgat gttgaagtcc gacattttat tagacatgat
      841 atttcctctg tagaagggaa gaataaggaa ggtgaactac ccaagagagt gaaagtggta
      901 tttatgaaac gattatcgtc acgaaaagaa agagtcgcgt ttctcacaga agtgaaagtg
      961 cttagtaact gtaatcatcg gaacatagtc actctacttg gaatttttgc taatgatgat
     1021 tttgattacc ttgtcattga gcatgctcct aatgggtttc tacataatca tcttgagacc
     1081 ataaaaaaca acccaatcaa tcttacttgg gttaagcgtt tgaaaattag ccttgatgtt
     1141 gcaaatgggc tgaaatatct tcaccatgag atggatgatc aaaaggtgat actaatccgt
     1201 tctttggcga gcagcatcat tgggttggac gagaactggg gggcgaagat ttattttttt
     1261 gagaactcaa tgatcgtgtc tcggaatcaa gatgagggtg ttttcaaagc tagagggatt
     1321 actgagactg tatacactga tccagaattt gtgaagaatc gtatagtttc aagaggagga
     1381 gatgtatata gtttcggagt aattttgttt gaacttcttt gtgggagggt agcctatgac
     1441 ccagttttcc gcaaagaaga ttacgacaga gcgctagcat atgtggcacg gcggcgacgt
     1501 tttaccgaga aaacggtaat ggaaatgata gatcctatca tcaaggaagg aagtactggt
     1561 gattataagt ttaccctaag tagaggagcc aataaggatt ctttggaaac atttataaaa
     1621 attgcatatg aatgtttggc agaaactgtg gaccaacgtc caacaatgaa ggtggtggtc
     1681 gaggggcttg agaaagcctt actatttcaa gaaaatattg agaataatcc cagagtttca
     1741 cttgaagaaa taacacaggc gactggaaac ttccatgtta gcaacttgat tggaaaagga
     1801 ggctttggga aagtttataa aggagaaatt caaaaaggtg atgaatttga taccattgtt
     1861 gcaaagcgat tggataaaac tagtggtcaa gaagaacaac aatttcagaa cgaactccaa
     1921 gttcttttca actataagca tgataatgtc atccgtcttg ttggctattg tgatgaaaaa
     1981 gatgaaaaag tcatcgttta tgagtacgca tcaagaggaa gccttaataa ctacttgaat
     2041 gatactacta atcttacttg gattaaacgg cttaacatat gcattgatgt tgcagctaca
     2101 ttggagttcc ttcatggagg agttacaaca catgtgatac atagagacat caaaactgaa
     2161 aacattttat tgaattacga gtggaaagca aaattagctg attttgggct ttctttgatt
     2221 agtgcaataa atcagaaaac agaatatgtc atcgctaatg agtgtggcac agagggctac
     2281 gtggacccac tttaccgaaa atttggcttc ttaaccatgg aatcagatat ttattcattc
     2341 ggtgttgttt tatttgagat cttatatgga aaatcaacat tttggttccg caaacatgaa
     2401 ggtcagtttt tgcctagctt cattaaacag cgattcgaag aaggaagaca caacgaggtg
     2461 gtttttgagg ctataaagga gcagattgtg ccaaaggcgc tgagtgcttt tcaagaaatt
     2521 tcctaccggt gcttaaatga cgatagagaa aatcgaccaa cagctaaaga agttttggaa
     2581 caacttaaga agacattgga attacaaaga aacagtggtt ggccagggga gatcaagcat
     2641 gatctccctt atgcacaaga tcgccaaaac ggctctccta aattagggtt ctacgcctga
//
LOCUS       XM_071832378             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842209), mRNA.
ACCESSION   XM_071832378
VERSION     XM_071832378.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139842209"
                     /note="uncharacterized LOC139842209; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842209"
     CDS             1..504
                     /gene="LOC139842209"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688479.1"
                     /db_xref="GeneID:139842209"
                     /translation="MFNIFNERAKRAQRYKTTCYHEQQGVFKVQSTYQRSGEGGTDYT
                     VEFKEKRCSCGIWQHQRLPCSHAISVCSHLNEDINRCISKKYTTPTWREQYSHHFNPL
                     RDASYWAHIQWNIMADPSRLIKHRGRKQSKHIKNQMDERENQKPNCGICRAEGHNRNT
                     YPTTRMP"
     misc_feature    148..231
                     /gene="LOC139842209"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgtttaaca tctttaacga acgggcaaaa agagctcaac gatacaaaac aacatgttat
       61 cacgaacaac aaggtgtttt caaggttcaa tcaacttatc aaagaagtgg tgaaggtggc
      121 accgattaca cagtggagtt taaagagaaa aggtgttcat gtggaatttg gcaacaccaa
      181 agattacctt gctctcatgc catttccgtg tgtagccatc taaacgagga tataaataga
      241 tgcatcagta aaaagtacac aactcctaca tggagagagc aatatagcca tcattttaat
      301 ccactaagag acgcgagcta ctgggcacat atacaatgga acattatggc cgatccatca
      361 agattgatta agcacagggg gaggaagcaa tcaaaacata ttaagaacca gatggatgag
      421 cgtgaaaacc aaaaaccaaa ttgtggtata tgcagggctg aaggtcacaa caggaatacc
      481 tatccaacta ctagaatgcc atag
//
LOCUS       XM_071832379            2130 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842210), mRNA.
ACCESSION   XM_071832379
VERSION     XM_071832379.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2130
                     /gene="LOC139842210"
                     /note="uncharacterized LOC139842210; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842210"
     CDS             1..2130
                     /gene="LOC139842210"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688480.1"
                     /db_xref="GeneID:139842210"
                     /translation="MSGRRTYSPEELRALINEGVSAALANMPGGSNTRQNCTYKEFMA
                     CKPLPFKGTEGPVGLTHWIEKMESVFSISNCAQANWVKFATSTLEGKALTWWNSIARP
                     MGLEAAHAIPWEDIKTRMTAEYCPDNEVKKMEAELWDLKVIGTDLATYTNRYLELILM
                     CPGMVPTEGKKIDRYVKGLSENIQASVHASKPQTLQETINMANDLMDQFTQRNAAEVK
                     SGDNKRKWTGNSNSQSSKKQEVSGKGYQGKAPYCSRCERHHEGRCTVTCGKCKKIGHL
                     TKKCWSKNTGTANPPATNNGAVKTCYECGQKGHFRNECPNKKGPEKGRGRAFNINANE
                     AREDPNLVTGTFLLNNHIVLVLFDYGANRSFVSIESSCMLDKTHVPIDTKYCIELVNS
                     KLMKANKIYKDCTLVLEGKPFLVDLMPIEIGSFDVVIGMDWLSKNRAEVVCFEKAIRI
                     PLDNGENLMVYGDKTGVKLNLILCMKAQKYLRKGYQAILAHVKEIETEEKRIEDVPIV
                     REFPNVFPEELPDDILVYSKSKEEHEQHLRLLLELLEKEQLRFIEGFSKIARPLTALT
                     HKGKKYEWSDVHEATFQLLKQKLTSAPILSLPEGNDDFVVYCDASRQVADALSRKERV
                     KPLRVRALNLIVNTNLTTQIRDSQLEALKEENKKEESLRGLDKQFEIKGDGTRYFARR
                     IWVPKIGEVRKKVLDEAHKTRHVLDLL"
     misc_feature    244..543
                     /gene="LOC139842210"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <739..1020
                     /gene="LOC139842210"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    967..1344
                     /gene="LOC139842210"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1072..1074,1078..1080,1084..1086,1159..1167,
                     1282..1284)
                     /gene="LOC139842210"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1072..1080
                     /gene="LOC139842210"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1072..1074
                     /gene="LOC139842210"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1159..1170,1180..1191)
                     /gene="LOC139842210"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1720..>1833
                     /gene="LOC139842210"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atgtctggaa gacgaactta cagtcctgaa gaactccgag cccttatcaa tgaaggtgtc
       61 tccgctgcat tggctaatat gcctggaggc tcaaacacaa gacaaaactg cacttacaag
      121 gagtttatgg cttgtaagcc actaccattc aaaggcactg aaggaccagt gggtctaacc
      181 cattggattg agaagatgga gtcagtgttt agtattagta actgtgctca agctaactgg
      241 gtaaagtttg ctacttccac actggaaggt aaggccttga cctggtggaa ttctattgct
      301 cgacctatgg gtctcgaggc tgctcatgcc atcccttggg aagacatcaa aacccgtatg
      361 actgctgagt attgtcccga taatgaagtt aagaagatgg aggcagagtt atgggatcta
      421 aaggttattg ggactgatct tgctacttat accaaccgct atttggaatt gattctgatg
      481 tgtccgggaa tggtcccaac tgaagggaag aaaatcgacc gttatgttaa gggtctttct
      541 gaaaatattc aagctagtgt tcatgcttct aaaccccaaa ctttgcaaga gaccattaat
      601 atggcaaatg atctcatgga tcaatttact caacggaatg ctgctgaagt gaaatctggg
      661 gataataaga ggaagtggac tggaaattct aactcacagt cctccaaaaa gcaggaagtt
      721 tctggaaagg ggtatcaagg aaaggctcct tactgttcaa ggtgtgagag acaccatgag
      781 ggaagatgca ctgtgacttg tggaaagtgc aagaaaatag ggcacctgac caagaaatgc
      841 tggtcaaaga atactggtac cgcaaatcct cctgctacta ataacggtgc cgtgaagaca
      901 tgttatgagt gcggtcaaaa ggggcatttt agaaatgaat gtccaaacaa gaaaggacca
      961 gagaaaggaa gaggaagagc atttaatatc aatgctaacg aggctcgtga ggaccccaac
     1021 ttggttactg gtacgtttct tttaaacaat cacattgttt tagtattgtt tgattatggt
     1081 gcaaatagaa gtttcgtatc catagaatct agttgcatgc ttgataaaac ccatgtaccc
     1141 atagacacta agtactgtat tgaactggtg aacagtaaac ttatgaaggc taataaaatc
     1201 tacaaagact gtaccttagt tttagaaggg aaaccatttt tggtggacct gatgcctatt
     1261 gaaataggaa gttttgacgt agtaatagga atggactggt tgtctaagaa tagagccgag
     1321 gtcgtgtgtt tcgaaaaggc gattcgtata ccccttgata atggagagaa tttgatggtt
     1381 tatggagata aaactggcgt aaaacttaac ctgattttgt gcatgaaggc acaaaagtat
     1441 ctgaggaaag gttatcaagc tatccttgca catgtgaaag agatcgagac cgaagaaaag
     1501 cgaattgaag atgtaccaat tgttagagaa ttcccaaacg tctttcccga agaactacct
     1561 gatgacatct tggtatactc gaagagtaaa gaggaacatg agcaacatct gagattacta
     1621 ttggaactac tcgagaagga acaattgaga ttcattgaag ggttctcaaa aattgcacga
     1681 ccattgactg ccttgactca taagggcaag aaatatgagt ggtccgatgt gcatgaagct
     1741 actttccaac ttctgaaaca gaagttaaca tctgctccta tcctgtccct acccgaagga
     1801 aacgatgact ttgtcgtata ctgtgacgct tctcgccaag tggctgacgc cctaagccga
     1861 aaagaaaggg ttaaaccttt acgagttaga gccttaaatc tgattgtcaa taccaatttg
     1921 actacacaaa ttcgagattc ccaacttgaa gcgcttaaag aagagaataa gaaggaagaa
     1981 tctctcagag gtttagacaa gcaattcgaa ataaaaggag atggaactcg ttattttgcc
     2041 agaagaattt gggtcccaaa aattggcgaa gtaagaaaga aggtgctaga tgaggcacat
     2101 aagacaaggc atgtgcttga cttgctctaa
//
LOCUS       XM_071832381             471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative wall-associated
            receptor kinase-like 16 (LOC139842211), mRNA.
ACCESSION   XM_071832381
VERSION     XM_071832381.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..471
                     /gene="LOC139842211"
                     /note="putative wall-associated receptor kinase-like 16;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 14 Proteins"
                     /db_xref="GeneID:139842211"
     CDS             1..471
                     /gene="LOC139842211"
                     /codon_start=1
                     /product="putative wall-associated receptor kinase-like
                     16"
                     /protein_id="XP_071688482.1"
                     /db_xref="GeneID:139842211"
                     /translation="MRMSSVLLVIVMKKDEKVIVYEYASRGSLDRHLNTSSLTWMKQL
                     NICIDVANALKFLHGGVATQATVIHRDIKTENILLNDEWKAKLVDYGLSMISAINQKT
                     EYIIANACGTEGYVDPLYRKSGFLTMESDIYSFGVVLFEILCGRSTFSFNKHES"
     misc_feature    19..>450
                     /gene="LOC139842211"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgagaatgt catccgtctt gttggttatt gtgatgaaaa aagatgaaaa agtgatcgtt
       61 tatgagtatg catcgagagg aagccttgat aggcacttga atactagtag ccttacttgg
      121 atgaaacagc ttaacatatg cattgatgtt gcaaatgcct taaagttcct tcatggagga
      181 gttgcaacac aagcaacagt gatacataga gacatcaaaa ctgaaaacat tctactgaat
      241 gatgagtgga aagcaaaatt agttgattat gggctttcaa tgattagtgc aataaatcag
      301 aaaacagaat atatcatcgc taatgcgtgc ggcacagagg gctatgtgga cccactttac
      361 cgaaaatctg gcttcttaac catggaatcc gatatttatt cattcggtgt tgtcttattt
      421 gagatcttgt gtggaagatc aacattttcg ttcaacaagc atgaaagtta g
//
LOCUS       XM_071832382             744 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL28 (LOC139842212), mRNA.
ACCESSION   XM_071832382
VERSION     XM_071832382.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..744
                     /gene="LOC139842212"
                     /note="probable serine/threonine-protein kinase PBL28;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:139842212"
     CDS             1..744
                     /gene="LOC139842212"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL28"
                     /protein_id="XP_071688483.1"
                     /db_xref="GeneID:139842212"
                     /translation="MILVTEHASNGYLKDYWENVKDKSVLTWEKRLKICLDVAHALKY
                     IECEMGVGMLKNVYFISSQDIVLDENWGAKIKFDEHHLGKDNLLIRIDVRCLGEFLLV
                     VLFGKRTYTDFCDKVFDWSIETYLPKYINDGQIYSMLDSTIKNDSGACFASLNKFIEI
                     ASECVLKPDDQKPTMNVIVNELQQEEKKISSNQFPSVEICDFSSPYLLQKEYVDSEDK
                     DAGNDVHKITFVLFYPSKKRFIILLFETS"
     misc_feature    <1..552
                     /gene="LOC139842212"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atgatccttg tcactgagca cgcgtctaat gggtacctta aagattattg ggaaaatgtc
       61 aaagacaagt ctgttcttac ttgggaaaaa cgactgaaaa tttgtcttga tgttgcacat
      121 gcattgaaat atattgagtg tgaaatggga gtcggaatgc tgaaaaacgt ctattttatt
      181 agcagccaag atattgtgtt ggacgagaat tggggggcaa agattaaatt tgacgaacat
      241 catctcggaa aggataactt actaatacgt atagatgtac gatgtttagg agaatttttg
      301 ttagtggttc tatttgggaa aagaacgtat acagattttt gtgacaaggt gtttgactgg
      361 agtatagaaa cttatttacc aaaatacatc aacgacggac agatatattc gatgctagat
      421 tcgacaatca agaacgatag tggagcctgc tttgcttctt tgaataaatt tatcgaaatt
      481 gcatctgaat gtgttctgaa acctgatgac caaaagccaa caatgaatgt catcgtcaat
      541 gagctccagc aggaagagaa gaagatatcc agcaatcaat ttccatctgt ggaaatttgt
      601 gactttagtt ctccttattt gttgcaaaaa gaatatgttg attcggaaga taaagatgct
      661 ggaaatgatg ttcataaaat aacatttgtc ctattttacc cttccaaaaa gcgattcatt
      721 atactccttt ttgagacaag ctga
//
LOCUS       XM_071832383            1764 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL26 (LOC139842213), mRNA.
ACCESSION   XM_071832383
VERSION     XM_071832383.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1764
                     /gene="LOC139842213"
                     /note="probable serine/threonine-protein kinase PBL26;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139842213"
     CDS             1..1764
                     /gene="LOC139842213"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL26"
                     /protein_id="XP_071688484.1"
                     /db_xref="GeneID:139842213"
                     /translation="MTQVNKLKHLKIPVDEIKEATSLASKSHVMACSLMYEVELQRFN
                     EDDISSVEGKNNEGELPKRKKTVCTKQLLARESSVFFKEVEMLINCKHPNIVTLLGFC
                     VDYPFKCLVVEHAPYGFLNEHLDRNIKDNPINLTWVKRLKISLDVAKGLKYLHHEMED
                     QKMIVICSMGSRNIGLDENYGAKIYDFENSMLLSQNQDKRVFYFKTIYKNGYTGPEFV
                     KNGIVTRGTDVYSLGVILFELLCGRLADDLIFYKESLACEARRRFNEKTVMEMIDPII
                     KEGSTGNNEDDPIISLEDITKATKNFHVVNRIGKGGFGNVYRGKLPKGDGFDTIVAKR
                     LDKTSAQGEKQFQNELQILFKYKHENVIRLVGYCDEKDKKVIVYDYASRGSLDRYLND
                     TTSLTWIKRLNICIDVASALAFLHGGVATQASVIHRDIKTENILLNDEWKAKLADYGL
                     SLISAINQKTEYIIANACSIEGYVDPLYRKSGFLTMEFDIYSFGVVLFEILCGRSTFW
                     FREHEGQFLPSFIKQRFEEGKHNEVVFEAIKEQIVPKALSAFQKIAYECLNDDRENRP
                     TSKEVLEQLKKTLEFQISKTD"
     misc_feature    220..855
                     /gene="LOC139842213"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    922..1731
                     /gene="LOC139842213"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(922..933,940..942,946..948,994..996,997..999,
                     1084..1086,1132..1143,1285..1287,1297..1302,1306..1308,
                     1336..1341)
                     /gene="LOC139842213"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgacacagg taaataaatt gaagcatttg aagattccag tagatgaaat aaaagaggct
       61 acaagtctag catcgaagtc acatgtcatg gcatgctctt taatgtatga agttgaactc
      121 caacgtttta atgaagatga tatttcttct gtggaaggga agaataacga aggtgaacta
      181 cccaagagaa aaaaaactgt atgtacaaaa caattattgg cacgagaaag ctcagttttc
      241 tttaaagaag ttgaaatgct tattaactgt aagcatccga acatagtcac tctacttgga
      301 ttttgtgtag attatccctt caagtgcctt gtcgttgagc atgctccata tggatttctt
      361 aatgaacatc ttgataggaa catcaaagac aacccaatta atcttacttg ggttaagcgt
      421 ttgaaaatta gccttgatgt tgcaaaagga ttgaaatatc ttcaccatga gatggaagat
      481 caaaagatga tagtgatctg ttctatgggg agccgcaaca ttgggttgga cgagaactat
      541 ggggcgaaaa tttatgattt tgagaactca atgctcctgt ctcagaatca agataaacgt
      601 gttttctatt ttaaaacgat ttataaaaat ggatacactg gtccagaatt tgtgaagaat
      661 ggtatagtta caagaggaac agatgtatat agtctcggag taattttgtt tgaacttctt
      721 tgtgggaggc tagccgatga cctaattttc tataaagaaa gtttagcatg tgaagcacga
      781 cgacgtttca atgagaaaac tgtaatggaa atgatagatc ctatcataaa ggaaggaagt
      841 acgggaaaca atgaagatga tcccataatt tcacttgaag acataacaaa ggcgacaaaa
      901 aactttcatg ttgtcaaccg gattggaaaa ggaggctttg ggaacgttta tagaggaaaa
      961 cttcctaaag gtgatggatt tgataccatt gttgcaaaac gattggataa aacaagtgct
     1021 caaggggaaa aacaatttca gaatgaactc caaattcttt tcaaatacaa gcatgagaat
     1081 gtcatccgtc ttgttggcta ttgtgatgaa aaagataaaa aagtcatcgt ttatgattat
     1141 gcgtcgagag gaagccttga taggtacttg aatgatacta ctagtcttac ttggattaaa
     1201 agactcaaca tatgcattga tgttgcatcc gcattggcgt tccttcatgg aggagttgca
     1261 acacaggcat cggtaataca tagagacatc aaaactgaaa acattctttt gaatgacgag
     1321 tggaaagcaa aattagctga ttatgggctt tctctgataa gtgcaataaa tcagaaaacc
     1381 gaatatataa tcgctaatgc gtgcagcata gagggctacg ttgacccact ttaccgaaaa
     1441 tctggcttct taaccatgga attcgatatc tattcattcg gtgttgtctt atttgagata
     1501 ttgtgtggaa gatcaacatt ttggtttcgg gaacatgaag gtcagtttct gcctagtttc
     1561 attaaacaga gattcgaaga aggaaaacac aatgaggtgg ttttcgaggc tataaaggag
     1621 cagattgtgc cgaaggcact gagtgcattt caaaagattg cctacgaatg cttaaatgac
     1681 gatagagaaa atcgaccaac atctaaagaa gttctggaac aacttaagaa gacattggaa
     1741 ttccaaattt caaaaactga ttga
//
LOCUS       XM_071832384             945 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At5g59700 (LOC139842214), mRNA.
ACCESSION   XM_071832384
VERSION     XM_071832384.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..945
                     /gene="LOC139842214"
                     /note="probable receptor-like protein kinase At5g59700;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 39 Proteins"
                     /db_xref="GeneID:139842214"
     CDS             1..945
                     /gene="LOC139842214"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At5g59700"
                     /protein_id="XP_071688485.1"
                     /db_xref="GeneID:139842214"
                     /translation="MESTIRELAHLQIPLENVRKATNNFDNSNIIGEGDFGKVYKGRL
                     LWSGKSLKIAARRLDQKNQRVTEFWREISMLSILKHENIVSIIGFCDEQNENIIINKR
                     CANGSLLMHINKERLTWIQRFSICVGVARALSYMHDDEEERLYSVIHRNVNSSTILLD
                     NNLVPKLSGFEYSLKHVVGQKEQVLLSDTIDTRGYMDPEITKTGGVTLKSDIYSFGIV
                     LWEVLCGRKAFISDEDKDKRFLSSLARSHYEKETLERIIHPDLWNYMSQISLTSFSKA
                     AYFCIKNERVHRPNINSTFRELTEAFRYQESFDSSHLS"
     misc_feature    91..900
                     /gene="LOC139842214"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(91..102,109..111,115..117,160..162,166..168,
                     250..252,298..309,451..453,463..468,472..474,502..507)
                     /gene="LOC139842214"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggaatcta caatcaggga gttggctcac ttacaaatcc cacttgaaaa cgtacgtaag
       61 gccaccaaca actttgataa tagcaatatc attggggaag gtgatttcgg aaaagtttac
      121 aagggacggc tcttgtggtc cggaaagtca ttgaaaattg ctgcccggag attagatcaa
      181 aagaatcaac gagtcactga gttctggagg gagatctcta tgctttcgat tctcaaacat
      241 gagaatattg tctctattat tgggttctgt gacgaacaaa atgagaatat cattataaac
      301 aagcgttgtg caaacggaag tctcttgatg catataaaca aagagagact cacatggatc
      361 caaagattta gtatatgtgt tggtgttgcg cgcgcattaa gctacatgca cgatgatgaa
      421 gaagaacgcc tttactctgt catacatcgt aacgtcaata gctccaccat attattggat
      481 aataaccttg tccctaagtt atcgggtttt gaatactctc tcaaacatgt cgtaggccaa
      541 aaggagcagg tcctcctttc ggacaccatt gacacaagag ggtatatgga cccagaaatt
      601 actaaaaccg gaggtgtgac gttgaagtca gatatctact catttggcat tgttttatgg
      661 gaagtgttat gcgggaggaa agcatttatt tcagatgaag ataaggataa gagattttta
      721 tcatcgttgg ccagatctca ttatgaaaaa gaaacactgg aaaggataat tcatcctgat
      781 ctatggaatt atatgtccca aatatcactc accagtttct caaaagcagc gtatttttgc
      841 ataaagaatg agcgagtaca tcgtccaaat ataaacagta ctttccgtga acttactgag
      901 gcatttagat atcaagagtc atttgatagt tcacatttat catag
//
LOCUS       XM_071832385            1806 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative receptor-like
            protein kinase At1g72540 (LOC139842215), mRNA.
ACCESSION   XM_071832385
VERSION     XM_071832385.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1806
                     /gene="LOC139842215"
                     /note="putative receptor-like protein kinase At1g72540;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139842215"
     CDS             1..1806
                     /gene="LOC139842215"
                     /codon_start=1
                     /product="putative receptor-like protein kinase At1g72540"
                     /protein_id="XP_071688486.1"
                     /db_xref="GeneID:139842215"
                     /translation="MLFTEVEMLINCKHRNIVTLYGFCVDYWKYLVIEHAPNGFLNEH
                     LEKVKDNLINLNWVKRLKICLDVANGLKYLHHEMENQNMIINCSMTSSSIGLDKDWGA
                     KIYSFKNSMLLSPNQDADVFKFKRIDETVYTDPQFKKNRMVRRGTDVYSFGVVLFELL
                     CGRLADDPIYVKEDYDRGLAYVAQRRFNEKTIMELIDPIIKEGSGDYKFTLSRGANKD
                     SLETFIRIAYKCLAETADQRPTMIVVVEELQKALLFQENSENDLRISLDIIKKATRNF
                     HVGNWIGKGGFGNVYRGKLHKGDGFDTIVAKRLDKKGGQGEQQFRNELQILFNYKHDN
                     VIRLVGYCDEDDEKVIVYEFAARGSLDRYLNDTSLTWIKRLNICIDVATALEFLHGGV
                     ATQASVIHRDIKTENILLNDEWKAKLADYGISMISAINQKAEYIIANACGTEGYVDPL
                     YRKSGFLTMESDIYSFGVVLFEILCGRSTFWFYKYEGQFLPSFIKQRFEEGKHKEVVF
                     EAIKAQIVPKGLSTFQTIAHRCLNDDRENRPTTKEVLEQLKKTLEFQISKTSNFHYKE
                     YLQDTSNKLAKISNLTSNRKEQTKQRNGKPITTYN"
     misc_feature    10..750
                     /gene="LOC139842215"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    844..1650
                     /gene="LOC139842215"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(844..855,862..864,868..870,916..918,919..921,
                     1006..1008,1054..1065,1204..1206,1216..1221,1225..1227,
                     1255..1260)
                     /gene="LOC139842215"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgttattca ctgaagttga aatgcttatt aactgtaagc atcggaacat agtcactcta
       61 tatggatttt gtgttgatta ctggaagtac cttgtcattg agcatgctcc taatggattt
      121 cttaatgaac atcttgagaa agtcaaagac aacctgatta atcttaattg ggttaagcgt
      181 ttgaaaattt gccttgatgt tgcaaatgga ttgaaatatc ttcaccatga aatggaaaat
      241 caaaacatga taataaactg ttctatgaca agcagcagca ttggcttgga caaggactgg
      301 ggggcgaaga tttattcttt taagaactca atgctcctgt ctccgaatca agatgcggat
      361 gttttcaaat tcaaaaggat tgatgaaact gtatacactg atccacagtt taagaagaat
      421 cgtatggtta gaagaggaac agatgtatat agttttggcg tagttttgtt tgaacttctt
      481 tgtgggaggt tagccgatga cccaatttac gttaaagaag attacgacag agggcttgca
      541 tatgtggcac aacgacgttt taatgagaaa acgataatgg aattgataga tccgatcatc
      601 aaggaaggaa gtggtgatta caagtttacc ctaagtagag gagcaaataa ggattctttg
      661 gaaacattta tacgcattgc atataaatgt ttggcagaaa ctgcggacca acgtccaacg
      721 atgatagtgg tggtcgagga gcttcagaaa gccttactat ttcaagaaaa tagtgagaat
      781 gatctcagaa tttcacttga tatcataaaa aaggcgacac gaaacttcca tgttggcaat
      841 tggattggaa aaggaggctt tgggaacgtt tatagaggaa aacttcataa aggtgatgga
      901 ttcgatacca ttgttgcaaa gcgattggat aaaaaaggtg gtcaagggga acaacaattt
      961 cggaatgaac tccaaattct ttttaattat aagcatgata atgtcatccg tcttgttggc
     1021 tattgtgatg aagatgatga aaaagtcatc gtttatgagt tcgcggcgag aggaagcctt
     1081 gataggtact tgaatgatac tagtcttact tggattaaac ggcttaacat atgcattgat
     1141 gttgcaaccg cattggaatt ccttcatgga ggagttgcaa cacaggcatc ggtaatacat
     1201 agagacatca aaactgaaaa cattctattg aatgatgagt ggaaagcgaa attagctgat
     1261 tatgggattt cgatgattag tgcaataaat cagaaagcgg aatatatcat cgctaatgcg
     1321 tgcggcacag agggctacgt ggacccactt tatagaaaat ctggcttctt aaccatggaa
     1381 tccgatattt attctttcgg tgttgtttta tttgagattt tgtgtggaag atcaacattt
     1441 tggttctaca aatatgaagg tcagtttctg cctagtttca ttaaacaaag attcgaagaa
     1501 ggaaaacata aggaggtggt ttttgaggct ataaaggccc aaattgtgcc gaagggtctt
     1561 agtacatttc aaacaattgc ccaccggtgc ttgaatgacg atagagaaaa tcgaccgaca
     1621 actaaagaag ttctggaaca acttaagaag acattggaat tccaaatttc aaaaacaagc
     1681 aactttcatt ataaggaata tttacaagat acaagtaata agctagccaa gattagcaac
     1741 ctgactagta accgaaagga acaaacaaaa cagagaaatg gaaagcctat tacaacctac
     1801 aattaa
//
LOCUS       XM_071832386            3672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842217), mRNA.
ACCESSION   XM_071832386
VERSION     XM_071832386.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3672
                     /gene="LOC139842217"
                     /note="uncharacterized LOC139842217; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842217"
     CDS             1..3672
                     /gene="LOC139842217"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688487.1"
                     /db_xref="GeneID:139842217"
                     /translation="MDLSGFLSVGETGDNGYSNCKSRATIDGDGSSSKGADQRWAKVF
                     QRWPKKDSKGKSRGRKFWKKSFPILVATERMHRGGYHRVPLRKNAHRGNEDDPRDAEI
                     DRLNRRIAELEFNRDHDFVGSDSDRSSDLSDTNPFTNAPRGFQRGNRDDPLRNLGVKI
                     EIPEFKGVLQPDDFLDWLSTVERIFDLRDVPEHLKVKLVAIKLRKHASLWWDNVKKNR
                     ALAGKSKIETWEKMKKLLKNKFLPGNYRQEAFLEYHALQQKSLSVEELIREFDKLRIR
                     CDSNEEEEQLIARFLGALNPEISNVVTLQPFWSFNDVCKLALKVEKQLIRGKTRAPFS
                     RFPPVNKAGPVTLDKGKREQPSSSAGPNNNGNNIRAPRCFKCNGMGHYSRDCPNQRTF
                     TTQDDHDEPKYDTEEDEGDTKLDQEELVYPDQGEALVVHRALNAIPVPTTDEHAWLRN
                     NIFRTRVTAEGKVCNMIIDGGSCENVVSNEMVEKLGLKAEDHPEPYQLTWLKKGNRIK
                     VTKRCLVKFSIGKKYKDEVWCEVIPMDACHLLLGRPWQFDRRTKHDGFKNTYTFCKDG
                     VQVTLVPWDHRKQPPKADTLFLSRSEFEHTVKLAPLIFALVVAEINEVADKVPDQVKP
                     LLRQFADVIPEEIPPGLPIMRDVQHCIDLIPGSSIPNKPAYRMNPVEYEELQKQVSEL
                     LAKGLIRESMSPCAVPALLVPKQGGAFRMCIDSRAVNKITIKYRFPIPRFDDLLDQLH
                     GAIVFSKIDLRSGYHQIRMRPGDEWKTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNQ
                     VFKPFIGKFVVVYFDDILIYSSSTEQHLSHLKQVFNTLRDQKLFANGKKCHFLTSEVR
                     FLGYVVSGKGIRMDEGKIEAILTWPIPTTLHDIRSFHGLASFYRRFIKNFSTIIAPVT
                     ECMKGGRYTWNDAATAAFNDLKDKVTQAPVLALPNFEEVFHVECDASGVGIGGVLSQN
                     KRPVAFFSEKLNDSRRRYSTYDREFYAIVRCLEVWRHYLLPAEFVLYSDHEALKYIQG
                     QHKLSARHAKWVESLQAYSFVIQHKAGSQNQVADALSRRYSLISTMRIQVCGFDSWKS
                     MYATDRDFKDLWVTCTKGSHPLFNINNGYLFKGTRICVPIGSVREMVILEGHAGSLGG
                     HFGMNKTFLLLKPNFYWPHMERDVNRVVARCRVCHIAKTQSTIRACTCRYQYLSDHGK
                     ILVSTLFSVCPVLNDKRIP"
     misc_feature    589..888
                     /gene="LOC139842217"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
     misc_feature    <1054..>1173
                     /gene="LOC139842217"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    1114..1164
                     /gene="LOC139842217"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
     misc_feature    1381..1635
                     /gene="LOC139842217"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1405..1407,1411..1413,1417..1419,1492..1500,
                     1618..1620)
                     /gene="LOC139842217"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1405..1413
                     /gene="LOC139842217"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1405..1407
                     /gene="LOC139842217"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1492..1503,1513..1524)
                     /gene="LOC139842217"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    2056..2586
                     /gene="LOC139842217"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(2245..2262,2347..2352,2431..2433,2437..2442,
                     2572..2577)
                     /gene="LOC139842217"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(2245..2262,2347..2349,2437..2439)
                     /gene="LOC139842217"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    2350..2352
                     /gene="LOC139842217"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    2863..3210
                     /gene="LOC139842217"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty3; cd09274"
                     /db_xref="CDD:260006"
     misc_feature    order(2875..2886,2971..2979,2986..2988,3061..3063,
                     3160..3162,3202..3204)
                     /gene="LOC139842217"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260006"
     misc_feature    3388..3558
                     /gene="LOC139842217"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggatttga gtgggttttt gtctgttggc gaaacaggag ataacgggta tagcaactgc
       61 aagtctcgag caacaataga tggtgatgga tcgtctagta aaggtgcaga tcaaaggtgg
      121 gccaaggttt tccagcgttg gcccaagaag gacagcaaag gaaaatcaag aggcagaaaa
      181 ttctggaaga aatcttttcc tattctggtt gcaaccgaaa gaatgcatcg tggaggttac
      241 catcgagtac cacttcgtaa aaatgcccat cgaggcaacg aagatgatcc aagggatgct
      301 gaaattgatc ggttgaatag aagaattgct gaactagagt ttaatcgtga tcatgacttt
      361 gtggggagtg attctgatcg ctccagtgat ctgtctgata cgaatccttt caccaatgcg
      421 ccgagaggat tccaaagggg taatcgtgat gatcccctac ggaacttggg agtaaagatt
      481 gagattcctg agtttaaggg tgtcttgcaa ccagatgatt ttcttgactg gctaagtacg
      541 gtggaacgca tctttgactt gcgtgacgtt cccgagcact tgaaggtcaa gttagtcgca
      601 ataaagttga gaaagcatgc ttctttgtgg tgggataatg ttaaaaagaa tcgagcttta
      661 gcggggaaat caaaaatcga gacgtgggaa aagatgaaga agttgttaaa aaacaaattt
      721 ctaccaggaa actatcgaca ggaagcattc ttggagtacc atgcacttca acaaaagtcc
      781 ttaagtgttg aagaattgat tagggagttc gataagctac gtattcggtg tgattcaaat
      841 gaagaagaag agcagttgat tgcaagattt ttgggagcct taaatcccga aatttcgaac
      901 gtggtaactt tacaaccatt ttggtcgttt aatgatgttt gtaagctagc tttaaaagtt
      961 gagaaacagt taatcagagg caaaactcga gctccttttt cacgatttcc accagttaac
     1021 aaggctggtc cagtaacgtt agataaagga aaacgagaac aaccatcgtc tagtgctggt
     1081 cccaataata atggtaataa catccgggct cctcgatgtt ttaagtgtaa tggaatgggt
     1141 cattactcac gtgactgccc aaaccaacgc acctttacca cgcaggacga tcatgacgaa
     1201 ccaaagtatg atacagaaga agatgaaggg gacacaaaac tagatcagga ggagttagtc
     1261 tacccggatc aaggagaagc gttagtcgtg catcgagctt tgaatgctat ccccgtacct
     1321 acaactgatg aacatgcttg gttacgaaat aatatttttc gaactcgggt caccgccgag
     1381 ggaaaggtat gtaatatgat tattgatggt gggagttgtg agaacgtggt gtcaaatgag
     1441 atggtggaaa agttgggtct aaaggcagaa gatcatcctg aaccatatca gttgacttgg
     1501 ttaaagaaag gaaaccgcat aaaggtgacg aaaaggtgtc ttgttaaatt ctcaatcggg
     1561 aaaaaataca aagatgaagt atggtgtgaa gttattccca tggatgcgtg tcaccttctt
     1621 ttaggtcgac catggcaatt tgatcgacga acgaaacatg atggttttaa aaacacttac
     1681 actttttgta aagatggtgt gcaggtaaca ctggtcccct gggatcatcg gaaacaacca
     1741 ccaaaagcag atacattatt tttaagtcga tccgagtttg agcacacggt caaattagca
     1801 cctttgattt ttgcattggt tgttgcagaa ataaatgaag ttgcagataa ggtgcctgac
     1861 caagttaagc cactcctacg gcaatttgca gatgttatac ccgaagaaat tcctcctgga
     1921 ttgccgataa tgcgcgatgt gcaacattgc attgacttga tcccaggttc gtcaataccg
     1981 aataaacctg catataggat gaacccggtt gaatacgaag aactacaaaa gcaagtttct
     2041 gagttattgg cgaaagggtt aattcgagaa agtatgagtc cttgtgccgt tccggcactt
     2101 ctggttccta aacaaggtgg agcttttagg atgtgtatcg acagtagagc ggttaacaag
     2161 attactatta agtaccgttt tccaattcct aggttcgatg acttattgga tcagttacac
     2221 ggtgctattg tgttttctaa aattgacttg aggagtggct accaccaaat aagaatgcga
     2281 ccaggagatg agtggaagac ggcttttaag actcgggacg ggttatatga atggatggtt
     2341 atgccatttg ggttatccaa cgcaccaagt acgtttatga ggttgatgaa tcaggtcttc
     2401 aagcctttta ttggaaaatt cgttgttgtg tactttgacg atatcctcat atatagttcc
     2461 tcaaccgagc agcacttgtc tcatcttaag caagtattta acacattgag ggatcagaaa
     2521 ctttttgcaa atggtaaaaa atgtcacttc ctgacatcag aagtgagatt cctcgggtac
     2581 gttgtgtcgg gcaagggtat acgcatggat gaaggcaaga ttgaggctat tctgacttgg
     2641 ccaatcccga caaccctcca cgatatacgc agttttcacg ggttagcttc tttttaccga
     2701 cgtttcataa agaactttag tactataatt gctcctgtta cagaatgcat gaaaggtggg
     2761 agatatacat ggaacgatgc ggctacagca gcttttaatg atttaaaaga taaggtaact
     2821 caagcacccg tgctcgcatt acccaatttc gaggaagttt ttcatgttga atgtgatgca
     2881 tccggagttg ggattggagg ggttttaagc caaaataagc gacctgttgc tttctttagt
     2941 gagaaactaa atgattcccg acgacgatat tcaacttacg atcgcgaatt ttatgctatt
     3001 gttagatgcc ttgaagtgtg gaggcattac ttattacccg ctgagtttgt cctttactct
     3061 gatcatgaag ctttaaaata catacagggg caacataaat taagcgctag acacgcgaaa
     3121 tgggtagaat cattacaagc atattcattc gttattcagc acaaagcggg atctcaaaat
     3181 caagtcgcag acgcccttag taggcgttat tcattgattt ccactatgcg tatccaggtt
     3241 tgcggttttg actcttggaa gtctatgtat gcaacagatc gtgactttaa agatttatgg
     3301 gtaacatgta ctaagggttc tcacccactg tttaatatta ataatgggta tttgttcaag
     3361 gggactagaa tttgtgttcc aattggatct gttagagaaa tggtgattct tgaagggcat
     3421 gcaggaagtc tggggggcca ctttggcatg aacaaaactt ttctacttct caagcctaat
     3481 ttttattggc cgcatatgga gcgcgatgtt aaccgagtag tcgcccgatg tcgtgtttgt
     3541 catattgcaa aaacacaaag tacaattcgg gcttgtacat gccgttacca gtacctctcc
     3601 gaccatggga agatattagt ctcgactttg ttctcggtct gccccgtact caacgacaaa
     3661 aggattccgt ga
//
LOCUS       XM_071832388             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bet1-like SNARE 1-1
            (LOC139842218), mRNA.
ACCESSION   XM_071832388
VERSION     XM_071832388.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139842218"
                     /note="bet1-like SNARE 1-1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139842218"
     CDS             1..462
                     /gene="LOC139842218"
                     /codon_start=1
                     /product="bet1-like SNARE 1-1"
                     /protein_id="XP_071688489.1"
                     /db_xref="GeneID:139842218"
                     /translation="MSYRRDNRALRNSLFDNLDGIEEGGLRASSSYPRDIDELENEKS
                     INSLQDRVVFLIRLTGDIHEEVQSHNRMLDKMGNGMDSTRGIMSGTMDRFKMNSRRTT
                     EDSMMVAFVGVRKWFNGDFGICLRLQITGIRVMVVMYYGGGGFGLATGIET"
     misc_feature    112..285
                     /gene="LOC139842218"
                     /note="SNARE motif of Bet1; Region: SNARE_Bet1; cd15853"
                     /db_xref="CDD:277206"
     misc_feature    order(124..135,139..147,151..159,163..168,172..189,
                     193..198,202..207,214..219,223..231,235..243,247..252,
                     256..261,268..273,277..282)
                     /gene="LOC139842218"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277206"
     misc_feature    205..207
                     /gene="LOC139842218"
                     /note="zero layer; other site"
                     /db_xref="CDD:277206"
ORIGIN      
        1 atgagctatc gaagggacaa tcgtgcatta agaaactctc tatttgataa ccttgatggc
       61 attgaggagg gtggtctcag ggcttcttct tcatatcctc gtgatattga tgagctcgaa
      121 aatgaaaaat ctataaatag cttgcaagac agagttgttt ttctaattag attgactggt
      181 gacatacatg aggaggtgca gagtcataat cgaatgctgg acaaaatggg caacgggatg
      241 gattccacaa gggggattat gtcaggaact atggatcggt tcaagatgaa tagtaggcgt
      301 acaacagaag attcgatgat ggtggctttt gttggtgttc gaaagtggtt taatggtgat
      361 tttgggattt gtttacggct gcaaataaca ggcataaggg tgatggttgt gatgtactac
      421 ggtggtggtg gttttggatt agcaaccgga atagagactt ag
//
LOCUS       XM_071832389             819 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL22 (LOC139842219), mRNA.
ACCESSION   XM_071832389
VERSION     XM_071832389.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..819
                     /gene="LOC139842219"
                     /note="probable serine/threonine-protein kinase PBL22;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 29 Proteins"
                     /db_xref="GeneID:139842219"
     CDS             1..819
                     /gene="LOC139842219"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL22"
                     /protein_id="XP_071688490.1"
                     /db_xref="GeneID:139842219"
                     /translation="MELIKATGNFHVDNLIGKGGFGNVYTGKLSKGDGFNTIVAKRLD
                     KTSGQGKQQFRNELQILFSYKHENVIRIIGYCDGKDEKVIVYEYASRGSLNSYLNNSS
                     SLTCIKRLNICIDVATALEFLHGGVATHASVIHRDIKTENILLNDEWKAKLADYGLSM
                     ISAINHKTEYIIANACGTEGYVDPLYRKSGFLTIESDIYSFGVVLFEILCGKSTFWFR
                     KHEGQFLPSFIKRSFEEGKHNEVVFEAIKAQIVPKALSTFQTIAYRCLNDDREN"
     misc_feature    46..813
                     /gene="LOC139842219"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(46..57,64..66,70..72,118..120,121..123,208..210,
                     256..267,409..411,421..426,430..432,460..465)
                     /gene="LOC139842219"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggagctca ttaaggctac aggaaacttc catgttgaca acttgattgg aaaaggaggc
       61 tttgggaacg tttatacagg aaaactttct aaaggtgatg gcttcaatac tattgttgca
      121 aaacggttgg ataaaactag tggtcaaggg aaacaacaat ttcggaatga actccaaatt
      181 cttttcagtt ataagcatga gaatgtcatc cgtattattg gttattgtga tggaaaagat
      241 gaaaaagtca ttgtttatga gtatgcgtcg agaggaagcc ttaatagtta cttgaataat
      301 tctagtagtc ttacttgtat taaacggctt aatatatgca ttgatgttgc aaccgcattg
      361 gagttccttc acggaggagt tgcaacacat gcatcggtga tacatagaga tatcaaaact
      421 gaaaacattc tattgaatga tgagtggaaa gcaaaattag ctgattatgg gctttcgatg
      481 attagtgcaa taaatcataa aacagaatat atcatcgcta atgcgtgcgg cacagagggc
      541 tacgtggacc cactttatag aaaatctggc ttcttaacca tagaatccga tatttattca
      601 ttcggtgttg ttttatttga gatcttatgt ggaaaatcaa cattttggtt ccgcaaacat
      661 gaaggtcagt ttctgcctag tttcattaaa cggagttttg aagaaggaaa acacaacgag
      721 gtggtttttg aggctataaa ggcccagatt gtgccgaagg cacttagtac atttcaaaca
      781 attgcctacc ggtgcttgaa tgacgataga gaaaattga
//
LOCUS       XM_071832390             735 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842220), mRNA.
ACCESSION   XM_071832390
VERSION     XM_071832390.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..735
                     /gene="LOC139842220"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139842220"
     CDS             1..735
                     /gene="LOC139842220"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688491.1"
                     /db_xref="GeneID:139842220"
                     /translation="METHTKLNADLNGKSVNSTKYRSMIGSLMYLTSSRLDIMFATCL
                     CARYQSNPKESHYRAVKRIFRYLKGTVNLGLWYPKDTGFELVAYFDVNHGGCKLDRKS
                     TSGSVQLLGNRLVSWSSKKQLCVSLSTAEAEYVTAASCCSQVLWMKTQLTDYGFNFDK
                     IPIYCDSKSSIAISCNPVQHTKTKHIDVRYHFIKDHVEKGNIELYFVPTEYQLTDMFT
                     KALDEKRLDFLKSKIGMLDLPEQEEP"
     misc_feature    256..663
                     /gene="LOC139842220"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(268..279,382..390,397..399,496..498,574..576,
                     655..657)
                     /gene="LOC139842220"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggaaactc atacaaagtt gaacgccgat ttaaatggaa aatctgttaa ctcaactaaa
       61 tatcgcagca tgatcggatc actaatgtat ttaacttcaa gtcgtctcga tattatgttt
      121 gccacttgct tgtgtgcacg ttatcagtcc aacccaaaag aatcacatta tcgggctgtt
      181 aaacgaattt tcagatacct taaaggtact gtaaacttag gtctatggta cccaaaagac
      241 actgggtttg aattagttgc ctattttgac gtaaaccatg ggggttgtaa acttgaccga
      301 aaaagtacct ctgggagtgt acaattgttg ggaaatagac ttgttagttg gtcatccaag
      361 aagcaactct gtgtttcatt gtctacagct gaagctgaat atgtaacggc tgctagttgt
      421 tgctctcaag ttctttggat gaaaacacaa ctaactgatt atgggtttaa ttttgataaa
      481 atcccaatat attgtgattc taagagttcc attgctattt catgtaatcc tgttcaacac
      541 acgaaaacaa aacacataga tgttcgctac cactttataa aagaccacgt agaaaaagga
      601 aacatagaac tgtatttcgt tcctacagaa tatcaactta ctgatatgtt tacgaaagcg
      661 ttagatgaga aacgtcttga tttcttaaaa tcaaaaatcg gcatgttgga tttaccagaa
      721 caagaggaac cataa
//
LOCUS       XM_071832391            2604 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842221), mRNA.
ACCESSION   XM_071832391
VERSION     XM_071832391.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2604
                     /gene="LOC139842221"
                     /note="uncharacterized LOC139842221; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842221"
     CDS             1..2604
                     /gene="LOC139842221"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688492.1"
                     /db_xref="GeneID:139842221"
                     /translation="MAVPEALPMAHTYYKVALPVQNHVMLSLNRKTVLSSIEVEAVFE
                     VVDEVYFSAIPDSSNTLYPPVLQKNKLKQLTTQLSHLKIPLSDIMLATNDFSKEYKIN
                     NGYDFPLYQTTLDHLDKGVLRPKRPVVIKHLSARDYNQVVEHFYGELEMLTTCKHRNI
                     VTLVGFCNEEFKMILVTENVSNNGYLDDYWHNVKDKSVLTWEKRLKICIDVAHALKYI
                     HCEMEDRMMIRDCNISSRNIALDENWGAKIVFDKDCLSIGKSKRYTDVYDFGLVLLTV
                     LLGENVHSYFYHKTSEPRIETYLPTYINDGQILSMLDSTIKNVSGAHIASLKKFIEIA
                     SECVLKPDDQKPSMNVVVNELQQALLLQEENHIADDRFPPGEIQDFGSPYYLRQKEYD
                     DSEEEDCENDNDEITCGHATYLVKPVTALLVIAMTQGNKLKHLKIPIGEIVDVIIECI
                     DSHSVEHYEIREVEFQRFNEDDIPSVEGKNSEGELPKRGKTVCLKQLTSRKRVFFTEV
                     KMLSNCKHRNIATLLGFCVDDYFTCLVVDHAPNGFLNEQLKNIKDNPINLTWVKRLKI
                     CLDVANGLKYLHHEMEDQKMIINCSIASSSIGLDENWGAKIYYFGNSMLLSRNQDDNV
                     YKFKSIKETVYADPEFVKNRIVTKGVDVYSFGVVLFELLCGRLANDPIYEEEENDRGI
                     ADVVRRRFNEKRVMEMIDPIIKEGSGDYKFTLSREANKDSLETFINIAYNCLAETVDQ
                     RPTMKVVVEELEKALFFQERNEDDPIISLDDITKATGNFDVGNWIGKGGFGNVYRGKL
                     PKGDGFDTIVAKRLDTIGGQGEQQFRNELQILFNYKHENVIRLVGYCDEKDEKVIVYD
                     SFMEELQHKQQ"
     misc_feature    355..1071
                     /gene="LOC139842221"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    1465..2259
                     /gene="LOC139842221"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2353..>2580
                     /gene="LOC139842221"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 atggcggtcc ctgaggcgct tcccatggca cacacgtatt acaaagttgc tcttccagtt
       61 caaaatcatg tgatgctttc tttaaatcgg aagactgttc tctcatcaat tgaagttgaa
      121 gctgtgtttg aagttgttga tgaagtttat tttagtgcaa ttcctgacag tagtaacacc
      181 ctttaccctc ctgtgttgca gaaaaataaa ctgaaacagt taactactca actgagtcac
      241 ttgaagatcc cactgagtga tataatgtta gccacaaatg atttttctaa agaatacaag
      301 attaacaatg ggtatgattt tcccttatat caaactacac tagaccattt ggataaaggc
      361 gtcctacgtc ccaaaagacc agtagttata aaacacttgt cggctagaga ctacaatcaa
      421 gtagtagaac atttctatgg ggaacttgaa atgcttacta cttgcaagca tcgcaacata
      481 gtcactctag ttggattttg taatgaagag tttaagatga tcctagttac tgagaacgtg
      541 tctaataatg ggtaccttga tgattattgg cacaacgtca aagacaagtc tgttcttact
      601 tgggaaaaac gattgaaaat ttgtattgat gttgcacatg cattaaaata tattcactgt
      661 gaaatggaag accgaatgat gatacgagac tgtaatataa gtagccgaaa tattgcgttg
      721 gacgagaatt ggggagcaaa gattgtattt gataaagatt gtctaagtat tggtaagtct
      781 aaaagatata cagatgtata tgatttcgga ttagttttgt taacggttct gttaggggaa
      841 aatgtgcata gctattttta tcacaagacg tctgaaccga gaatagagac ctatttacca
      901 acatacatca acgacggaca gatattatcg atgctagatt cgacaatcaa gaatgttagt
      961 ggagcccaca tagcgtcttt gaagaaattt atcgaaattg catctgaatg tgtcctgaaa
     1021 cctgatgacc aaaagccatc aatgaatgtc gttgtcaatg agctccagca ggcgttactc
     1081 ttacaagaag agaaccatat agccgacgat cgatttccac ctggggaaat tcaagacttt
     1141 ggatctcctt attatttgag gcaaaaagaa tatgatgatt cagaagagga agattgtgaa
     1201 aatgataatg atgaaataac atgtgggcac gctacatatc tagtaaaacc tgtaacagcc
     1261 ttattggtaa tcgcaatgac acagggaaac aaattgaagc atttgaagat tccaataggt
     1321 gaaatagtag atgtcataat agaatgcatt gactcacact ccgtggaaca ctatgagata
     1381 cgtgaagttg aattccaacg ttttaatgaa gatgatattc cctctgtgga agggaagaat
     1441 agcgaaggtg aactacccaa gagaggaaaa actgtatgtc taaaacaatt aacgtcaaga
     1501 aaaagagtgt tcttcactga agttaaaatg cttagtaatt gtaagcatcg aaacatagcc
     1561 actctacttg gattttgtgt tgatgattat ttcacgtgcc ttgtcgttga ccatgctcct
     1621 aatggatttc ttaatgaaca acttaagaac atcaaagaca acccgattaa tcttacctgg
     1681 gttaagcgtc tgaaaatttg ccttgatgtt gcaaatggat tgaaatatct tcaccatgag
     1741 atggaagatc agaagatgat aataaattgt tctatcgcga gcagcagcat tgggttggac
     1801 gagaactggg gggcgaagat atattatttt gggaactcaa tgctcctgtc tcggaatcaa
     1861 gatgataatg tttataaatt caaaagcatt aaagaaactg tatatgctga tccagaattt
     1921 gtaaagaatc gtatagttac aaagggagta gatgtatata gtttcggggt agttttgttt
     1981 gaacttcttt gtgggaggtt agccaatgac ccaatttatg aagaagaaga aaatgacaga
     2041 gggatagcag atgtggtacg acgacgtttt aatgaaaaaa gggtaatgga aatgatagat
     2101 cctatcatta aggaaggaag tggtgattac aagtttacgc taagtagaga agccaacaag
     2161 gattctttgg aaacatttat aaatattgca tataattgtt tggcagaaac tgtggaccaa
     2221 cgtccaacga tgaaagtggt tgttgaggag ctggagaaag ccttattttt tcaagaaaga
     2281 aatgaagatg atcccataat ttcacttgat gatataacaa aagcaacagg aaacttcgat
     2341 gttggcaact ggattggaaa aggaggcttt gggaacgttt atagaggaaa acttcctaaa
     2401 ggtgatggat tcgataccat tgttgcaaag cgattagata caataggtgg tcaaggggaa
     2461 caacaatttc ggaatgagct ccaaattctt ttcaattata agcatgagaa tgtcatccgt
     2521 cttgttggtt attgtgatga aaaagatgaa aaagtgatcg tttatgattc cttcatggag
     2581 gagttgcaac acaagcaaca gtga
//
LOCUS       XM_071832392             948 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable receptor-like
            protein kinase At1g30570 (LOC139842222), mRNA.
ACCESSION   XM_071832392
VERSION     XM_071832392.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..948
                     /gene="LOC139842222"
                     /note="probable receptor-like protein kinase At1g30570;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 40 Proteins"
                     /db_xref="GeneID:139842222"
     CDS             1..948
                     /gene="LOC139842222"
                     /codon_start=1
                     /product="probable receptor-like protein kinase At1g30570"
                     /protein_id="XP_071688493.1"
                     /db_xref="GeneID:139842222"
                     /translation="MASTIRELGHLQIPLEDVREATNNFDNSNIIGEGEFGKVYRGRL
                     LRSGKLVKIAARRLKRKDQQGVIEFWREISMLSILNHQNIVSVIGFCDEQNEKIIINQ
                     RCAKGSLLMHISKDRLTWIQRFGICVGVARALSYMHYDDERGYAVIHRNVNSSTILLD
                     KNFVPRLSGFEYSVKHVVDQKEEVLLSNAIGTRGYMDPEMTKTGGVTLKSDIYSFGIV
                     LWEMLCGRKTFIPDEDEDERFLASLARSHYENRTLKDIIHPDLWNHMSHYSLTSFSDA
                     AYSCIKNERVHRPDMNSIIHLLEKALEFQVSFDNLHSSY"
     misc_feature    91..900
                     /gene="LOC139842222"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(91..102,109..111,115..117,160..162,166..168,
                     253..255,301..312,451..453,463..468,472..474,502..507)
                     /gene="LOC139842222"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atggcatcta caatcaggga gttgggtcac ttacaaatcc cactcgaaga cgtacgtgag
       61 gccaccaaca actttgataa tagtaatatc atcggggaag gtgaattcgg aaaagtgtac
      121 aggggacggc tcttgcggtc cggcaagttg gtgaaaattg ctgctcggag attaaagcgt
      181 aaagaccagc aaggagtcat tgagttctgg agggagatct ctatgctttc gattctcaat
      241 catcaaaata ttgtctctgt tatcggattt tgtgacgaac aaaatgagaa gatcattata
      301 aaccagcgtt gtgcaaaggg aagtctcttg atgcatataa gcaaagatag actcacatgg
      361 atccaaagat ttgggatatg tgttggtgtt gcgcgcgcat taagctacat gcattatgat
      421 gatgaacgcg gttacgctgt catacatcgt aacgtcaata gctccaccat attattggat
      481 aaaaactttg tccctaggtt atcgggtttt gaatactctg tgaaacatgt cgtagaccaa
      541 aaggaggagg ttctcctttc aaatgctatc ggcacaagag ggtatatgga cccagaaatg
      601 actaaaactg gaggtgtgac gttgaagtca gacatctact catttggcat tgttttatgg
      661 gagatgttat gcgggaggaa aacatttatt cccgatgaag atgaggatga gaggttttta
      721 gcatcgttgg ccagatctca ttatgaaaac agaacactga aagatataat ccatcctgat
      781 ttatggaatc atatgtccca ttattcactc accagctttt cagatgcagc atattcttgc
      841 ataaagaatg agcgagtaca ccgtccagat atgaacagta ttatccatct acttgagaag
      901 gcattggaat ttcaggtttc atttgataat ttgcattcgt catactaa
//
LOCUS       XM_071832393            1563 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842223), mRNA.
ACCESSION   XM_071832393
VERSION     XM_071832393.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1563
                     /gene="LOC139842223"
                     /note="uncharacterized LOC139842223; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842223"
     CDS             1..1563
                     /gene="LOC139842223"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688494.1"
                     /db_xref="GeneID:139842223"
                     /translation="MDNEWEYGEEEQAFMSEEMAGKVVERILTKTAPGDEAVKPPAMA
                     ESTQCFITRIAEYPLPRNLGIPSIGVYDGTTDPEDFLTMFEGVMRLQHCEEEVTCHMF
                     PMVLHKMAREWFASLLLRSIISFLDLRAKFVMQYQSLRSCTLSHLDAHEITMHQNESL
                     SNFMKRYTVECQKIPDIPESAFHALRYDVSKTLHQALVVAQKHLRAGEMGHQRVERNY
                     RHENGGRHQKKSCSLNPSKKLSILQRLWRREKAQRVTDDVIFMKHMHTDNCKSLMREI
                     IAKIKAGELNHLLPGKQGKKIERDPTPERHIKVIWNGGEEQEVSRERNTEAWMYALIM
                     FHTIPNLQLSKDPVVISNVIANKFISKIYTDTSNEEDLLYLYCFRCFSFSVKDRLRNT
                     DIKITSITRASVRAVGKVKLDVTLGTYPLVRTEIVDFTVLDGKSRFNALLGRRTLRKF
                     GAIYSTSHAELRFPTPNGKSVVHYEYMGPARERSIVYEAERDMFKGGVSKQLFNRNEV
                     NGYFKVSKIMKH"
ORIGIN      
        1 atggacaatg aatgggaata tggagaagaa gaacaagcat ttatgtctga ggaaatggca
       61 ggaaaagtag tggaaaggat cttaacaaag acagcaccag gggatgaagc tgttaagcct
      121 ccagcaatgg cggaatcaac tcagtgtttc attactcgaa ttgcagagta tccactccca
      181 agaaacctgg gaataccatc tataggtgtt tatgatggaa cgactgatcc agaggatttc
      241 cttactatgt ttgaaggagt tatgaggttg caacactgtg aggaggaggt tacatgtcat
      301 atgtttccta tggtgttgca caagatggca agagagtggt ttgcaagtct tctgcttaga
      361 agcattatca gttttttgga cttgagggcc aagtttgtta tgcagtacca aagtttgaga
      421 agttgcacat tatcacactt ggatgcacat gaaattacta tgcatcagaa tgagtcttta
      481 agcaacttta tgaagcgtta tactgtcgaa tgtcagaaga tacctgatat accagagtca
      541 gcttttcatg cgttacggta tgatgtttca aaaactttgc atcaagcatt ggtagtggcg
      601 caaaaacatt tgagagctgg ggaaatggga catcagcggg ttgaaaggaa ttacaggcat
      661 gagaatggag gacgacacca aaagaaatct tgttcactga acccatcaaa gaaactttca
      721 atcctccagc gcctatggag gagagagaag gcccaaagag tgacagatga tgtgattttc
      781 atgaagcata tgcacacaga caactgcaag tctttaatga gagagatcat tgctaagatc
      841 aaggctggtg aattaaacca tttgctacct ggaaagcaag gaaagaagat tgaaagggac
      901 ccaactcctg aacgtcacat aaaagttatc tggaatgggg gagaggagca agaggtgagc
      961 agagagcgta atacggaagc atggatgtat gctcttatca tgtttcacac aataccaaac
     1021 ctgcaactgt cgaaagaccc tgtcgtaatc tctaatgtga ttgcaaacaa gtttatatcc
     1081 aaaatctaca cagacactag caacgaggaa gatcttttgt acttgtactg ttttcgatgt
     1141 ttttcgttca gcgttaagga taggttacgc aacacggata taaaaatcac tagcataacg
     1201 agagcatctg taagggcggt aggaaaagtt aagttggatg tcacgctggg aacatatcca
     1261 ttagtccgca cagaaatcgt ggatttcaca gtgctggacg gcaagtcgag attcaatgct
     1321 ttattgggac ggaggactct gcgtaaattt ggtgctatct attcaacatc acatgcagaa
     1381 ttgcgtttcc ctacccctaa tggcaaatca gtggtgcatt atgagtatat ggggcctgca
     1441 agggagcgat ctattgttta tgaagcagaa agggacatgt tcaaaggagg tgtttcaaag
     1501 cagttgttta acagaaatga agtgaatggg tacttcaaag tatcaaagat aatgaaacat
     1561 taa
//
LOCUS       XM_071832394            3705 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842224), mRNA.
ACCESSION   XM_071832394
VERSION     XM_071832394.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3705
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3705
                     /gene="LOC139842224"
                     /note="uncharacterized LOC139842224; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842224"
     CDS             1..3705
                     /gene="LOC139842224"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688495.1"
                     /db_xref="GeneID:139842224"
                     /translation="MSSTIRELEHLKISLEEVRKATNNFDNSNIIGKGDFGEVYRGQL
                     LRSDKLVKIAARRLDRKDRYGVTEFWREISMLSILNHENIVSIIGFCDEQDEKIIINK
                     RCVKGSLLMHINKERLTWIQRFRICVGVARALSYMHDDDERSYSVIHRNINSSTILLD
                     NNFVPRLSSFEYSLKHVVDQKEQVLLSNPIGTTGYMDLEITKTGGVTLKSDIYSFGIV
                     LWEVLCWRKAFIPNEDEDERFLASLARYHCENKTLKDIIHPDLWNHHLSKESLTSFSK
                     VAYSCIMNERVHRPDMSSIIHELEEALEFQVSFDNLKNKLKQLTTQLSHLKIPLSDIL
                     LATNNFSSECKIRSGVFFDLYKSIRLDHLDKLKMSSIVIKHLLPKKDHVVEAFYRELE
                     MLTTCKHRNIITLVGFCDEGFKMIIVTEYASNGHLDDYWRNIKDKSVLTWEKRLKICL
                     DVANALNYLHCEMEDQKLIINGDIRSKNIALHENWEAKIIFDGNHMTPGKYKRELDLF
                     GFGVVLLEILFGETVNSDFFRKTFDRRIDTYLPTYVNDGQIYSMLDSTIKNDSQVHIA
                     SLKIFIEIASKCVVKFGDQKPTMDVVVNELHRALLLQEENQISDDQFSPVEIQDFTPP
                     YMMQKEYVDSEEEDYEDDVDKGNKLKHLKIPVGEIEDAIIDLDSRYMEPYLIHEVELQ
                     RFNEDDIPSVEGKNNEAEVPKRRKTVCIKQLMSRKREFFSEVEMLMNCNHRNIVTLLG
                     FSFDHVSKYLVVEHASKGFLNEHLKNIKDNPINLTWVKRLKISLEVANGLKYLHHEME
                     DQKMIINCSITSSNIGLDENWGAKIFNFGNSMLLSRNQDEDVIYFKRIDKTVYIDPEF
                     VKNRIVTRGIDVYSFGVVLFELLCGRLADDPIFIGEHNRGLAYVARGRILEETLMEII
                     DPIIKEGSGDYKFTLSRGANKDSLETFIRIAYDCVAKPADQLPTMEVVVEELRKALLF
                     QKNDDDDPIIPLEDITKATENFHDRNLIGKGGFGNVYRGNLPKGDGFDTIVAKRLDRK
                     GGQGEKQFQNELQILFNYKHENVIHLIGYCDEKDEKVIVYEYASKGSLDRYLNNTTSL
                     SWIKRLNICIDVATALDFLHGGVATRASVIHRDIKTENILLNDEWKAKLADYGLSLIS
                     AINKNTEYIIDNACGTEGYMDPLYRESGFLTMESDIYSFGVVLFEILCGRSTFWFRKH
                     EGQFLPSFVKLVSLNKDSKKENTRRWFLRQ"
     misc_feature    91..903
                     /gene="LOC139842224"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(91..102,109..111,115..117,160..162,166..168,
                     253..255,301..312,451..453,463..468,472..474,502..507)
                     /gene="LOC139842224"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    1036..1788
                     /gene="LOC139842224"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1036..1047,1054..1056,1060..1062,1114..1116,
                     1120..1122,1207..1209,1255..1266,1417..1419,1429..1434,
                     1438..1440)
                     /gene="LOC139842224"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2116..2904
                     /gene="LOC139842224"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    2998..>3588
                     /gene="LOC139842224"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2998..3009,3016..3018,3022..3024,3070..3072,
                     3073..3075,3160..3162,3208..3219,3361..3363,3373..3378,
                     3382..3384,3412..3417)
                     /gene="LOC139842224"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgtcatcta caataaggga gttagaacac ttaaaaattt cacttgaaga ggtacgcaag
       61 gccaccaata actttgataa cagcaatatc attggaaaag gtgatttcgg agaagtgtac
      121 aggggacagc tcttgcggtc cgacaagttg gtgaaaattg ctgcccgaag attggatcgt
      181 aaggacagat atggagtcac tgagttctgg agggagatct ctatgctttc gattctcaat
      241 catgaaaata ttgtctctat tatcgggttc tgtgacgaac aagatgagaa gatcattata
      301 aacaagcgtt gtgtaaaggg aagtctcttg atgcatataa acaaagagag actcacatgg
      361 atccaaagat ttagaatatg tgttggtgtt gcacgtgcat tgagctacat gcacgatgat
      421 gacgaacgca gttactctgt tatacaccgt aacatcaaca gctccactat attattggat
      481 aataactttg tcccaaggtt atcaagtttt gaatactctc tcaaacatgt cgtagatcaa
      541 aaggagcagg ttcttctttc aaaccctatt ggcacaacag ggtatatgga cctggagatt
      601 actaaaactg gaggtgtgac actaaagtca gacatctact catttggcat tgttttatgg
      661 gaggtgttat gttggaggaa agcatttatt ccaaatgaag atgaggatga gagattttta
      721 gcatcgttgg ctagatatca ttgtgaaaac aaaacgctga aagatataat ccatcctgat
      781 ctatggaatc atcatctgtc caaggaatca ctcaccagct tctcaaaagt agcatattct
      841 tgcataatga acgagcgggt acaccgtcca gatatgagca gtataatcca tgaacttgag
      901 gaggcattgg aatttcaggt gtcatttgat aacttgaaaa ataaactcaa acaattgact
      961 actcaactga gtcacttgaa gattccactg agcgatatac tgttggccac aaataacttt
     1021 tctagtgaat gcaagattag gagtggagta ttttttgact tgtacaaaag tattagactc
     1081 gaccatttgg ataaattaaa aatgtcctct atagttataa aacacttgtt gccaaaaaaa
     1141 gatcacgtag tagaagcgtt ctatagggaa cttgaaatgc ttaccacttg taagcatcgt
     1201 aacataatca ccctagttgg attttgtgat gaaggtttta agatgatcat tgtcaccgag
     1261 tatgcgtcta atgggcacct tgatgattat tggcgcaaca tcaaagacaa gtctgttctt
     1321 acttgggaaa aacgattgaa aatatgtctt gatgttgcaa atgcattgaa ctatcttcac
     1381 tgtgaaatgg aagaccaaaa gttgataata aatggtgata taagaagcaa aaacattgca
     1441 ttgcacgaga attgggaggc aaagattata tttgacggaa atcatatgac gccaggtaag
     1501 tacaaaagag aattagattt atttggattc ggagtagttt tgttagagat actatttggg
     1561 gaaacggtga attccgattt ttttcgcaag acgtttgaca ggagaataga tacttattta
     1621 ccaacatacg taaacgacgg acagatatat tcgatgctag attcgacaat taagaacgat
     1681 agtcaagtcc acatagcttc tttgaagata tttatcgaaa ttgcatctaa atgtgtcgtg
     1741 aaatttggag accaaaagcc aacaatggac gtcgttgtca atgagctcca ccgggcatta
     1801 ctcttacaag aagagaacca aatatccgat gatcaatttt cacctgtgga aattcaagac
     1861 tttacacctc cttatatgat gcaaaaagaa tatgttgatt cagaagagga agattatgaa
     1921 gatgatgttg ataaagggaa caaattgaag catttgaaga ttccagtagg tgaaatagaa
     1981 gatgccataa tagatttgga ctcacgttac atggaaccct atctgataca tgaagttgaa
     2041 ctccaacgtt ttaatgaaga tgatattccc tctgtggaag ggaagaataa cgaagctgaa
     2101 gtaccgaaga gacgaaaaac tgtatgtata aaacaattaa tgtcacgaaa aagagagttc
     2161 ttctcagaag ttgaaatgct tatgaactgt aatcatcgga acatagtcac tctacttgga
     2221 ttttcttttg atcatgtgtc taagtacctt gtcgttgagc atgcttctaa aggatttctt
     2281 aatgaacatc ttaagaacat caaagacaac ccaattaatc ttacttgggt taagcgtttg
     2341 aaaattagcc ttgaagttgc aaatggattg aaatatcttc accatgagat ggaagatcaa
     2401 aagatgataa taaactgttc tatcacgagc agcaacattg ggttggacga aaactggggg
     2461 gcgaagattt ttaattttgg gaactcaatg ctcctatctc ggaatcaaga tgaggatgtg
     2521 atctatttca aaaggattga taaaactgta tacattgatc cagaatttgt gaagaatcgt
     2581 atagttacaa gaggaataga tgtatatagt tttggagttg ttttgtttga gcttctatgt
     2641 gggaggttag ccgatgaccc aattttcatt ggagaacata acagagggct agcttatgta
     2701 gcacgaggac gaatccttga ggaaacgcta atggaaatca tagatcctat tatcaaggaa
     2761 ggaagtggtg attacaagtt taccctaagt agaggagcca ataaagattc tttggaaaca
     2821 tttataagaa ttgcatatga ttgtgtggca aaacctgctg accaacttcc aacaatggaa
     2881 gtggttgtgg aagagcttcg gaaagcctta ttatttcaaa aaaacgatga tgatgacccc
     2941 ataatcccac ttgaagacat aacaaaggcg acagaaaact tccatgatcg aaacttgatt
     3001 ggaaaaggag gctttgggaa tgtttacaga ggaaatcttc ctaaaggtga tggatttgat
     3061 accattgttg caaagcgact ggacagaaaa ggtggtcaag gggaaaaaca atttcagaat
     3121 gaactccaaa ttcttttcaa ttataagcat gagaatgtga tccatcttat tggttattgt
     3181 gatgaaaaag atgaaaaagt catcgtttat gagtatgcat cgaaaggaag ccttgatagg
     3241 tacttgaata atactactag tctgtcttgg attaaacgcc ttaacatatg cattgatgtt
     3301 gcaaccgcat tggatttcct tcatggagga gttgcaacac gggcatcggt gatacataga
     3361 gacatcaaaa ctgaaaatat tttattgaat gatgagtgga aagcaaaatt agctgattat
     3421 gggctttcct taataagtgc aataaataag aatacagaat atatcatcga taatgcgtgt
     3481 ggcaccgagg gctacatgga cccactttat agagaatctg gcttcttaac catggaatcc
     3541 gatatttatt cattcggtgt tgttttattt gagatcttgt gtggaagatc aacattttgg
     3601 ttccgaaaac atgaaggtca atttctgcct agtttcgtta aactagtttc gttaaacaaa
     3661 gattcgaaga aggaaaacac aaggaggtgg tttttgaggc aataa
//
LOCUS       XM_071832395             411 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bZIP transcription factor
            44-like (LOC139842225), mRNA.
ACCESSION   XM_071832395
VERSION     XM_071832395.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..411
                     /gene="LOC139842225"
                     /note="bZIP transcription factor 44-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139842225"
     CDS             1..411
                     /gene="LOC139842225"
                     /codon_start=1
                     /product="bZIP transcription factor 44-like"
                     /protein_id="XP_071688496.1"
                     /db_xref="GeneID:139842225"
                     /translation="MSSECYLGVDDKKLKRKISNRESAKRSRMKKEQHMKDLNDQIFH
                     YTKKRDEMIMKIDGIAKGYTAMETENMVLKSQKQELEKRLEYAENVCVIYEGESHVSM
                     LSMGGAQEPWLRLWDQNQPSNFMSLMSSVGNFQF"
     misc_feature    37..>156
                     /gene="LOC139842225"
                     /note="Basic leucine zipper (bZIP) domain of Plant G-box
                     binding factor 1 (GBF1)-like transcription factors: a
                     DNA-binding and dimerization domain; Region:
                     bZIP_plant_GBF1; cd14702"
                     /db_xref="CDD:269850"
     misc_feature    order(46..51,55..63,67..84,88..96)
                     /gene="LOC139842225"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269850"
ORIGIN      
        1 atgtcatcag agtgctattt aggtgtggat gacaaaaaat tgaagaggaa gatttcgaac
       61 cgagaatcag caaagaggtc tagaatgaaa aaagaacagc acatgaaaga tctcaatgac
      121 caaatatttc attacaccaa aaagagagac gaaatgataa tgaaaattga tggaatcgca
      181 aaagggtaca ctgcgatgga gaccgaaaat atggtgttga aatcacaaaa acaagagttg
      241 gagaaaagat tggagtatgc agaaaatgtt tgtgttattt atgaaggtga gagtcatgtg
      301 tcaatgttat caatgggtgg tgctcaagaa ccatggctaa gattatggga ccaaaatcag
      361 ccttccaact ttatgtctct catgtcatct gttggaaatt tccaatttta a
//
LOCUS       XM_071832396            2895 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842226), mRNA.
ACCESSION   XM_071832396
VERSION     XM_071832396.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2895
                     /gene="LOC139842226"
                     /note="uncharacterized LOC139842226; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139842226"
     CDS             238..2895
                     /gene="LOC139842226"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688497.1"
                     /db_xref="GeneID:139842226"
                     /translation="MGAPEKLATSNNNSMQRVKVYRLNDDGKWDDQGTGHVTIDYLER
                     SEELALFVIDEEDNETLLVHHICSDDIYRKQEGTIISWRDSKSSSDLALSFQETTGCS
                     HIWDNICNVQRNLHIDTLRNDTYNGANNELRELPAVELSTLPSILKAVVDSSVTDQLG
                     VTELILHDQNFFRKLMDLFRVCEDLEDNDGLHMIYKIVKGIILLNSPQIFEKIFGDEL
                     IMDIIGCLEYDLEVPHIHHRNYLKEHVVFKEAIPIKDPLALSKIHQTYRIGYLKDVVL
                     RKVLDEATVASFNSMIHSNNGMVVTLLKDDSTFIKELFARLKSPTTSPDSKRNLVFFL
                     QEFCSLSKSLQVVQQLRLFRDLVTEGIFGVITDILQSEDKKLVLTGTDILIFSLNQDP
                     TMLRSYVSRKEGVRLLGLLVKGMLTDFGDDMHCQFLEIIRSLLDSFSSAGQRDAIVEV
                     FYERHLDQLISVIVASCLPNDATCIGHTSKSSDGFHTSAKPEILLNICDLLCFCVLHH
                     PYRIKCNFLLNGVLDKVLYLTRRREKYLVVAAVRFIRTLISHNDEHLSSYIAKNNVFK
                     PIIDAFISNGSRYNLLNSVVLELFEHIRKDNMKILLKYLVETFWDQLVKFDSLPCIQS
                     LKVRYDQAQEHAANQLEEDSRRHVEDRVLEKEEEDYFNKDSDEEDSTSASISHTTRIH
                     AQPRLTNGSDASCPSSRPGGLVDYEDDDEDDEDDKTPPSEQSEKSKDDDKESLGFSLK
                     RKLLTAKEDTNLVKKRKLSGKNPKSKESFFATLCSTLSHAALPVVKSAIGTHEKNETS
                     HEDNGSVHRSDNSNHKSETGHEENGSTVSRSENSNYKNETGHEEKGSISESENSNHKN
                     ETGHEEKQSVSQSEYINEESAEEKGVASI"
     misc_feature    739..1305
                     /gene="LOC139842226"
                     /note="Phosphatase 4 regulatory subunit 3; Region: PP4R3;
                     pfam04802"
                     /db_xref="CDD:461435"
ORIGIN      
        1 agagcttttg agaacataaa atagatacag atagaaacag gctttacttg catacatctt
       61 ctatatctat atctgtacat caattggttc attttagggt tttctttctt cgtaatcaat
      121 ctcccaaact ttaattccct tcctcaattc actttcattc aattccattc ttctcacacc
      181 taattcctct attaattcca tatcactaaa accctaattt tgcacaatta agctccgatg
      241 ggcgcgcctg agaaattagc tacttcaaac aacaattcga tgcagcgtgt taaggtgtat
      301 cgactgaatg atgatggaaa atgggatgat caagggactg gtcatgttac cattgattat
      361 ttagagaggt ctgaggaatt ggccttgttt gtaattgatg aagaagataa cgaaactttg
      421 cttgtgcatc atatttgttc tgatgatatt tatcgaaagc aagaaggtac gataatttcg
      481 tggagggatt caaagtcttc aagtgattta gctcttagtt ttcaagagac tacgggctgc
      541 tcgcacatat gggataatat atgcaacgtg cagcggaatt tgcatatcga cactctccgc
      601 aatgacacat ataatggggc taataatgag ttgcgggagt tgcctgctgt agagttatca
      661 acacttccat caatacttaa ggctgtggtt gacagtagtg ttaccgatca gttgggtgta
      721 acagagctca tcctacatga tcaaaatttt ttccggaagc tgatggattt gtttagagta
      781 tgcgaagatt tggaggacaa tgatggtctt cacatgatat acaagattgt caaagggatc
      841 attctactca atagtcctca gatcttcgaa aaaatatttg gtgatgaatt gatcatggat
      901 attattggat gtctcgaata tgacctagag gtacctcaca ttcatcatcg caattacctc
      961 aaggaacatg ttgtatttaa ggaggccata ccaattaaag atcccctggc attatcaaag
     1021 atacatcaga catacagaat cggttatttg aaggacgttg tgttgcgaaa ggtattggat
     1081 gaggccacag ttgcaagctt taattctatg attcactcga ataatggaat ggttgttact
     1141 ttattaaaag atgatagcac ttttattaaa gagttgtttg ctaggttaaa atctcctact
     1201 acatctcctg attccaagag aaatctggta tttttcttgc aagagttttg tagcctaagc
     1261 aagagcttgc aagttgtcca acaactccgg ctattcaggg atctagtgac tgaaggcata
     1321 tttggtgtta ttactgatat tttgcagagt gaagataaga aacttgttct gaccgggaca
     1381 gacatcctca ttttttcatt gaaccaggac ccaaccatgt tgcgttctta tgttagtcgg
     1441 aaggaaggtg tgcgattact tgggcttctg gtgaaaggga tgcttacaga ttttggggat
     1501 gatatgcatt gccagtttct tgaaattatt cgaagtcttc tcgattcttt ttcttcagca
     1561 ggacagagag atgctattgt tgaagtcttc tatgaaaggc acttggatca actgatcagt
     1621 gtaatagtag catcgtgcct tccaaatgat gctacatgta ttggtcatac atccaaaagt
     1681 tctgatgggt ttcacacaag tgcaaagccc gaaatacttc tgaacatatg tgatcttcta
     1741 tgtttttgcg ttctgcacca tccttataga ataaagtgta acttcttgct taacggtgtg
     1801 ttggataagg tattgtatct cactcgacga agggaaaaat atcttgttgt tgcagctgtt
     1861 cggtttattc gaaccttaat ctcacataac gatgaacatc tttcgagtta tattgcgaag
     1921 aacaatgtgt ttaagccaat tattgatgca tttatcagta atggcagtcg ctataatttg
     1981 ttgaactctg tagttctgga gctttttgag catattcgta aggataatat gaagatatta
     2041 ttgaagtatt tagttgaaac cttttgggat cagttggtca aatttgacag tttaccttgc
     2101 attcaatctc tcaaagttag atatgaccag gctcaggagc atgcagcaaa ccaacttgaa
     2161 gaagattcta gaagacatgt agaagaccgt gttttggaga aggaagagga ggattatttt
     2221 aacaaggata gtgatgaaga agattcaaca tctgcatcaa tatctcatac aacacgaata
     2281 catgcacaac cccgtttaac caatgggtct gatgccagct gtccatcgtc aaggcctggt
     2341 ggactagttg attacgaaga tgatgatgag gatgatgaag acgacaaaac cccaccgagt
     2401 gaacagtcag aaaaatctaa agatgatgat aaagaaagtt taggatttag tttaaaaaga
     2461 aagcttttaa ctgcaaagga agataccaac ttggttaaaa agcgcaagtt gagtggcaaa
     2521 aaccccaaat caaaagaaag tttctttgct acattatgct cgactcttag tcatgctgca
     2581 ttacctgttg tgaaatcagc aattggtaca catgagaaga atgaaacgag tcatgaagat
     2641 aacgggtctg tacaccgatc agataatagt aatcacaaga gtgaaacggg tcatgaagag
     2701 aacgggtcta ctgtaagccg atctgaaaat agtaattaca aaaatgaaac gggtcatgaa
     2761 gagaaaggat ctataagtga atctgaaaat agtaatcaca agaatgaaac gggtcatgaa
     2821 gagaaacagt ctgtaagcca atctgaatat attaatgaag aaagtgcaga agagaaagga
     2881 gttgcgagta tctag
//
LOCUS       XM_071832397             435 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842227), mRNA.
ACCESSION   XM_071832397
VERSION     XM_071832397.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..435
                     /gene="LOC139842227"
                     /note="uncharacterized LOC139842227; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842227"
     CDS             1..435
                     /gene="LOC139842227"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688498.1"
                     /db_xref="GeneID:139842227"
                     /translation="MVSHDDADRMWNCLATTIREVAKEALGVAVGTSRGHRSNRESWW
                     LSDEVQSKVALKQQRFRELITCRVGTLADRTRVEERYREAKREAKKAVACAKEKAYED
                     LYRKLGSKEGANDIYKIAKARERRRRDLDNIKFIKNEAGQTL"
ORIGIN      
        1 atggtttctc atgatgatgc ggatcggatg tggaattgcc tagcgaccac cattagagag
       61 gtagccaaag aagccttagg tgtggctgta ggaacatcga gaggccatag gtctaataga
      121 gaatcttggt ggcttagtga cgaggttcaa agcaaagttg cacttaagca acaaaggttt
      181 agggagctca tcacttgtag ggtagggact cttgcagata gaactagggt ggaagagaga
      241 tatagagaag ccaaaagaga agctaagaag gctgtagctt gcgcaaaaga aaaggcgtat
      301 gaagatttgt ataggaagct tggctccaaa gaaggagcta atgatattta caagatagcc
      361 aaagctaggg agcgaaggcg cagagaccta gataacatca agtttatcaa aaatgaagca
      421 ggtcaaactt tataa
//
LOCUS       XM_071832398             984 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842228), mRNA.
ACCESSION   XM_071832398
VERSION     XM_071832398.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..984
                     /gene="LOC139842228"
                     /note="uncharacterized LOC139842228; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842228"
     CDS             1..984
                     /gene="LOC139842228"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688499.1"
                     /db_xref="GeneID:139842228"
                     /translation="MAYDLQETNSSGVKSLHPSEGINVAANLFALITSIDSFVRTIGD
                     GSSTCFWKDTWLGNVPLKDKFCRLARFDRNSDATVCERLQWNGSASVLTWDWSRIPSI
                     RVRAELQQRAEMVADVKMDPSSSDSWKWCGNSGGNFTTNGLTSLIDSKTLIAGANAKE
                     YLKNNVVPKKVEIFIWRARRERIPVRIELDKRGIDLHSVRCPICDDDVESVGHALLGC
                     KKVFDVWLRVFKWWGLSNVSIPNFDSLLCGLPNVVNSESGTSIWQGVIWSICYLIWKN
                     RNSTNFKNKCWNSPNALIEIQMKSFKWIAKRFKGEKIDWHNWFNNPYCYLS"
     misc_feature    <499..654
                     /gene="LOC139842228"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcatacg atctacagga gacaaacagt tcaggtgtga aatcattgca tccatcggaa
       61 ggaataaatg ttgctgccaa tctttttgct ctaattacct ctattgattc ttttgttaga
      121 acaattggtg acgggtcttc tacttgcttt tggaaagata cgtggcttgg aaatgttccc
      181 ctcaaagata aattttgcag acttgctagg ttcgacagaa attctgatgc cactgtctgc
      241 gaaaggttgc aatggaatgg gtctgcttcg gttctgacat gggactggtc cagaatccct
      301 tccatccggg ttcgggctga actgcagcag cgcgcggaga tggttgctga tgtcaagatg
      361 gatccttctt catcagattc atggaagtgg tgcggaaata gtggtggaaa tttcactact
      421 aacggactaa cttctttgat cgatagcaaa accttaattg cgggtgcaaa cgcgaaagag
      481 tatttaaaaa ataatgtggt tccaaaaaag gtcgagattt ttatttggag agctagacgt
      541 gaacgaattc cggttcgcat cgagcttgac aaacggggaa ttgacctaca ctcggtccgt
      601 tgtccgattt gtgatgacga tgttgaatcg gttgggcatg ctctccttgg ttgcaaaaaa
      661 gtatttgatg tgtggcttcg ggtcttcaag tggtggggat tatccaacgt ttctatcccc
      721 aattttgata gtcttttgtg cggtttacca aatgtagtta attcggagtc gggaacaagt
      781 atttggcaag gcgttatttg gtctatatgt tacctcattt ggaagaatcg taattcaaca
      841 aatttcaaaa acaagtgttg gaattctcca aatgcgttga tcgagattca aatgaagagc
      901 ttcaagtgga tcgcgaagag gtttaaaggg gaaaagatcg attggcataa ttggttcaat
      961 aatccttatt gttatttatc ttaa
//
LOCUS       XM_071832399             411 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842229), mRNA.
ACCESSION   XM_071832399
VERSION     XM_071832399.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..411
                     /gene="LOC139842229"
                     /note="uncharacterized LOC139842229; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842229"
     CDS             1..411
                     /gene="LOC139842229"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688500.1"
                     /db_xref="GeneID:139842229"
                     /translation="MEIFVWRACKKRLPTLVELDKRGVDLYSVRCAICNDDVETIDHS
                     LIFCKNAYEVWTIIYNWWGLGPFSEPSILETFDGSVMQQSSKMGGLIWQAVEWTCGYL
                     LWKNRNLKAFKNKDGCVPNLVNEIQLMSFGFLED"
     misc_feature    <1..162
                     /gene="LOC139842229"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggagattt ttgtttggag agcatgcaag aaaagactac caacattagt tgagcttgat
       61 aagagaggtg tggatcttta ttcggttaga tgtgcaattt gtaatgatga tgttgagacc
      121 attgaccatt cgttgatatt ttgtaagaat gcatatgaag tatggacaat aatctataat
      181 tggtggggtc ttggtccatt ctcggaacct agtatactgg aaacatttga tggttcggta
      241 atgcaacaat cttcgaagat gggaggctta atatggcaag cggtagagtg gacgtgtgga
      301 tatctattgt ggaaaaatcg aaacttaaag gcttttaaaa acaaagatgg gtgcgttcca
      361 aatttggtga atgagattca acttatgagt tttggatttc tagaagattg a
//
LOCUS       XM_071832400             516 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842231), mRNA.
ACCESSION   XM_071832400
VERSION     XM_071832400.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..516
                     /gene="LOC139842231"
                     /note="uncharacterized LOC139842231; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842231"
     CDS             1..516
                     /gene="LOC139842231"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688501.1"
                     /db_xref="GeneID:139842231"
                     /translation="MADNQKLHPAVTVNNIRNFIPLTLELKDGKYESWSELFQIHCRP
                     FAVIDHIIPSTDSSSSTTSSDTNTVKDANWDRLDAIVLQWIYGTISAELLGIVHVSGF
                     SAQEAWECLNNVFHDNRHTRAIHLTHKFTNTRLDDFPDVSAYFQELKNIADQLSNVGP
                     KVEDDVGHRFE"
     misc_feature    250..>495
                     /gene="LOC139842231"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggccgata atcaaaagct ccaccctgca gtaactgtaa ataacatccg caactttatc
       61 cctctaacac tcgaactcaa agatggcaaa tacgaatcgt ggtccgaact ttttcagatc
      121 cactgtcggc cattcgcggt cattgatcat attattccat ccactgattc tagttcttct
      181 accaccagtt cagacacaaa cactgtgaaa gatgccaatt gggatcgtct tgatgccatt
      241 gtccttcaat ggatttacgg gacaatctca gccgaattac ttggcattgt acatgtctct
      301 ggtttttctg ctcaagaggc atgggaatgt ctcaataatg tgttccatga caatcgacac
      361 acccgtgcta ttcatctcac tcacaagttc accaacactc gactagacga tttccccgat
      421 gtttctgctt attttcagga actcaaaaac attgcagatc aactctctaa tgttggtcct
      481 aaggttgaag atgatgttgg tcaccggttt gaatga
//
LOCUS       XM_071832401             615 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842232), mRNA.
ACCESSION   XM_071832401
VERSION     XM_071832401.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..615
                     /gene="LOC139842232"
                     /note="uncharacterized LOC139842232; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842232"
     CDS             1..615
                     /gene="LOC139842232"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688502.1"
                     /db_xref="GeneID:139842232"
                     /translation="MPNYGKFLKDLTVKKGEHEQASTVFFEVECAAILEKSDMPPKLG
                     DPGPFIVPCRIDDSEIFRCLIDSGASINLVPLSIYSRLGLNELKSTNTRVRLVNQSIS
                     KLIGIAENLVIKVGKLEFPADFIVVDMPEGKVVPIVLGRPFIATAGALTDWRTCKLIL
                     RDRGKTLSFQTKFSVKPPLTPVDSVNVITSVETEACKLNKCGES"
     misc_feature    151..435
                     /gene="LOC139842232"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(196..198,202..204,208..210,280..288,412..414)
                     /gene="LOC139842232"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    196..204
                     /gene="LOC139842232"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    196..198
                     /gene="LOC139842232"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(280..291,301..312)
                     /gene="LOC139842232"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcccaatt atgggaaatt tttaaaagat ttgacggtga agaagggtga gcatgagcag
       61 gcatccaccg tattttttga agtagaatgt gctgctattt tggaaaagag tgatatgcca
      121 ccaaagttag gtgatcccgg gccattcata gtgccctgta ggattgatga ctctgaaatt
      181 tttaggtgtt taattgattc aggtgcgagt atcaatcttg tgccgttgtc tatttattca
      241 cgtttgggtt taaatgaact taagtcgact aatactagag ttaggttggt taaccagtca
      301 attagtaaac tcatagggat tgctgaaaat ttggtgatta aggtaggtaa attagagttt
      361 ccagcagact ttatagttgt tgatatgccg gaaggtaaag ttgtgccaat tgtgttaggt
      421 agaccattta tagcaactgc aggtgcactc actgactgga gaacttgtaa attgattttg
      481 agggatagag gtaaaacctt aagctttcag actaagttta gtgttaaacc accactcaca
      541 cctgtagatt ctgtgaatgt aattactagt gttgaaactg aagcttgtaa acttaataag
      601 tgtggggaat catag
//
LOCUS       XM_071832402             351 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842234), mRNA.
ACCESSION   XM_071832402
VERSION     XM_071832402.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..351
                     /gene="LOC139842234"
                     /note="uncharacterized LOC139842234; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842234"
     CDS             1..351
                     /gene="LOC139842234"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688503.1"
                     /db_xref="GeneID:139842234"
                     /translation="MEHSLIFCKLSLDIWDRVFAWWGFGNMSNLSFGEILRGKCPLPS
                     TILGTKIWQAVEWVCAYLIWENRNEKVFRGKSWNAPVALNEIQLKSFDWISHRLKKTK
                     IDWLTWLHNPSVYI"
ORIGIN      
        1 atggagcact cattgatctt ttgtaagctc tcgttggata tttgggaccg ggtgttcgca
       61 tggtggggtt tcgggaatat gtcaaacctt agctttggcg aaatccttcg tggtaagtgc
      121 ccactgccgt caactatact tgggaccaaa atatggcaag cggttgagtg ggtttgtgcc
      181 tacttgatat gggaaaatag gaacgagaaa gtgtttcgtg gcaagtcatg gaatgctcca
      241 gtcgcgctca acgaaatcca gctcaagtct ttcgattgga tctcacatag attgaagaaa
      301 acaaagatag attggttaac gtggttacat aatcctagtg tgtatattta g
//
LOCUS       XM_071832403            1218 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g47730 (LOC139842236), mRNA.
ACCESSION   XM_071832403
VERSION     XM_071832403.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1218
                     /gene="LOC139842236"
                     /note="putative F-box protein At1g47730; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139842236"
     CDS             1..1218
                     /gene="LOC139842236"
                     /codon_start=1
                     /product="putative F-box protein At1g47730"
                     /protein_id="XP_071688504.1"
                     /db_xref="GeneID:139842236"
                     /translation="MRFRSVSKPWKSLIDSSHFVSDYNLRPTQSHLFIMYEDTGEGGL
                     KCVSVVNDDTFPEHVSDISAVIPNSVKNMSGSSLVGSSQGLLCFYGYRYAVIWNPSIR
                     KSFEFKLPHDDVLTDHQYKNVFGFGVCPKTREPKLVMISFPQKPLETQNWTIDVFTTM
                     SRLWRNPCIQSNMRCWKNQSISKISNVLCKSLQLSSSNECVGEFIYWCAFNTDDALWV
                     VISFDVTNEEFGIIHLPKSIARYKYMDLSKYKESLVLLPHDYNIAKHDYDVWMMEGGT
                     TKSFKRLFTINTTYDCVKTMAFSYNGEAILERLQYYRKDNVASVDIYEPSSKCFKCSG
                     IRGIEGSFSMSSYMETLFLDIKLYIELLPSSKKSVSLTTPIVVVLLHLVRFSVDVEND
                     ALTVSQIIDIKYG"
     misc_feature    <1..57
                     /gene="LOC139842236"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    250..900
                     /gene="LOC139842236"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgcggttca ggagtgtctc caaaccatgg aaatcattga tcgatagctc tcattttgtt
       61 tcagattaca accttcgtcc aactcaatct cacctattta taatgtatga agataccgga
      121 gagggtgggc tgaaatgtgt ttcagttgtc aatgatgata catttccaga acatgtttct
      181 gacatctctg ccgttattcc aaattctgtt aaaaatatgt ccggatcatc acttgtaggt
      241 agctctcaag gtttgttgtg tttttacggt tatcggtatg ccgttatttg gaatccttcg
      301 attagaaaat cgtttgagtt taagttacct catgatgatg tgctaactga ccaccagtat
      361 aaaaatgttt tcggatttgg agtttgtccc aaaactagag aacctaagct tgtaatgatt
      421 tcatttcctc aaaaaccgtt ggaaacgcaa aattggacaa ttgacgtttt taccactatg
      481 tcaaggttgt ggagaaatcc atgtatccag agcaatatgc ggtgttggaa aaatcaatca
      541 attagcaaaa taagcaatgt actctgtaaa tcgttacaac tttcatcgtc gaatgaatgt
      601 gtaggagaat ttatctattg gtgtgctttt aatacggatg atgcactttg ggtagttatt
      661 tcatttgatg tgacaaacga agagtttgga attatacatc ttcctaagag tattgcgcgt
      721 tacaaataca tggacttgtc taagtacaag gagtctcttg ttttgcttcc tcacgattac
      781 aacattgcca aacatgatta tgacgtatgg atgatggagg gtggtactac aaaatcgttt
      841 aaaaggttat tcactataaa cacaacctat gattgtgtaa agacaatggc atttagttac
      901 aatggtgaag ctatattgga gaggctacag tattatcgaa aagataatgt agcatccgtt
      961 gatatttatg aaccctcttc aaaatgcttt aagtgtagcg ggattagggg aattgaggga
     1021 tcattctcta tgagttcgta catggaaaca ttgtttctgg atattaagct ttatattgag
     1081 ttactccctt cgtctaaaaa aagtgtgagc cttactactc caattgtcgt cgttttgttg
     1141 cacttggtgc gcttttctgt tgatgttgag aatgatgctc tgactgtctc ccaaatcatt
     1201 gacataaaat atggataa
//
LOCUS       XM_071832404             840 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842237), mRNA.
ACCESSION   XM_071832404
VERSION     XM_071832404.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..840
                     /gene="LOC139842237"
                     /note="uncharacterized LOC139842237; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842237"
     CDS             1..840
                     /gene="LOC139842237"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688505.1"
                     /db_xref="GeneID:139842237"
                     /translation="MGNSISVKFWSDQWIGDIKLMDQFGRLYALENNKHVTVAERLGS
                     VNNSEQLHGNDNFTWEWARPIRGRSQSELISLKSILSSVQINSNIADKWKWSLNSDGV
                     FTTKSLALLIDEKRSRNLTSFETLRNKAIPQKIGISIWRAQLNRIPVRVELDKRGIDL
                     DSILYPLCSNESKTVEHSLVQCSQVLKVWQQFFKWWNLSYVSHISLDQAFDDSSLFSS
                     LSNIGKIIWQGTKWTVCYALWKARNEKIFKNRSWNESTILTYIQTSSFAWISKRLKKC
                     SLD"
     misc_feature    307..564
                     /gene="LOC139842237"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggcaata gcatctcggt taaattctgg agcgaccaat ggatcgggga catcaagctc
       61 atggatcaat tcggcagatt atatgcactg gaaaacaaca aacatgttac ggtcgcagaa
      121 agattgggta gcgtgaacaa ttcggaacaa ttgcacggta atgataattt cacgtgggaa
      181 tgggccaggc ccatacgtgg tcgatctcag tccgaactca tctccttaaa gtcgattttg
      241 tcatctgtgc aaattaactc caatatagca gataaatgga aatggtcact caattctgat
      301 ggtgttttca cgactaaatc gttagccttg ctgattgatg agaaacgttc aagaaatctc
      361 acatcgttcg agactctccg caataaagct attccccaaa aaattggtat ttccatttgg
      421 agggcccaac tcaatagaat tccagtccgt gtcgagcttg ataagcgggg catcgatctg
      481 gattctatcc tttatcctct ttgttcgaat gaatccaaaa ccgtggaaca cagtttagtc
      541 caatgctcgc aggttttaaa agtttggcaa caatttttta agtggtggaa tctctcctac
      601 gtgagccaca tctctttgga tcaagctttt gacgattcct cactcttctc ttctctatca
      661 aacataggaa aaatcatttg gcaaggaacg aaatggacag tttgttatgc tttatggaag
      721 gctcgtaatg aaaaaatctt caagaatcgg tcttggaatg aatcaactat cctaacatac
      781 atccaaactt ctagcttcgc gtggatatca aaacgtctca agaaatgctc gttggattga
//
LOCUS       XM_071832406             528 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842238), mRNA.
ACCESSION   XM_071832406
VERSION     XM_071832406.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..528
                     /gene="LOC139842238"
                     /note="uncharacterized LOC139842238; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842238"
     CDS             1..528
                     /gene="LOC139842238"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688507.1"
                     /db_xref="GeneID:139842238"
                     /translation="MGRFPCLFALETDKLCKVSDRHSPLDWKWSWRRSIRSGVEDQQM
                     CELASAIDHVTYVDSRDKWVCSSLSNELFYVNEFRNLMDRDSTVRWPTHWCKVVPPNI
                     NFFLWCALLNRLPDKCSLFEKGAIQDISCPSCTNFGEELQHIFFECYVASQVWSFISS
                     WLDMVLPIWQSVDDL"
     misc_feature    <280..462
                     /gene="LOC139842238"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggggaggt ttccctgcct ctttgctctc gaaacggata aactttgtaa agtgtcagat
       61 cgacactctc ctttagattg gaagtggagc tggcgtcgaa gcattcgatc tggtgtagag
      121 gatcagcaga tgtgcgagct tgcctctgcc attgatcatg ttacttatgt tgacagtcgt
      181 gataaatggg tgtgctcttc tttatctaat gaactatttt atgttaatga gttcaggaac
      241 ctcatggatc gtgactcgac ggttagatgg ccaactcatt ggtgtaaggt tgtacctcct
      301 aatattaatt ttttcttgtg gtgtgctcta ttaaatagat tacccgacaa gtgtagtctt
      361 tttgagaaag gagctattca agacatatca tgtccttcat gcaccaattt tggcgaagag
      421 ctacaacata tattttttga atgttatgtt gcttcacaag tatggagttt catcagctca
      481 tggttagaca tggttctccc tatttggcaa tcggttgatg acctttag
//
LOCUS       XM_071832407            2136 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heparanase-like protein 3
            (LOC139842239), mRNA.
ACCESSION   XM_071832407
VERSION     XM_071832407.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2136
                     /gene="LOC139842239"
                     /note="heparanase-like protein 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139842239"
     CDS             1..2136
                     /gene="LOC139842239"
                     /codon_start=1
                     /product="heparanase-like protein 3"
                     /protein_id="XP_071688508.1"
                     /db_xref="GeneID:139842239"
                     /translation="MRRTRSSSQAAQQGQGSNQGRQQAPVPDQNDPAVWLAYVRDHED
                     YAEEYEWVLNQHNRLIPFVPRMEPPQNPPRAHDHEAGGSGVGRENVQEEVHMEEPESE
                     EELPQFQRRRRRQTQRTREEELEEVISGFHDFQVGYQHRDDQYEEQSINSTSSLNIIR
                     LNITIYTLSIIFVLHIILLLLLMVCFGSKMSVSLRVDIVEGSIHVNGSSSIGYIDDDF
                     VCATLDWWPPEKCDYGTCSWANASLLNLDLSNKILLNAIQAFSPLKLRLGGTLQDKVV
                     YEMIEGQELSPNFTKNTSVMFGFTNGCLTMSRWDQLNVFLKNSGAKVVFGLNALRGRT
                     IGQDGSMSGSWDSSNAEALIRYTANKGYTINGWELGNELSGNGIGTSVTAKQYALDTI
                     SLQNLVQKIYRGFQEKPIVLGPGGFYDANWFNDYVTQASNSLQVITHHIYNLGPGVDD
                     HLVEKILDPSYLDGGSQPFRDLQNILKKSGTSTVAWVGEAGGAYNSGHNLVSNAFVYG
                     FWYLDQLGMASMYDTKTYCRQTLIGGNYGLLNTTTFVPNPDYYSALLWHRLMGRHVLL
                     TSFIGTHKIRSYAHCSKISAGITLLLINLDGYRATNIGISIENGTTITTSTQQKTKHM
                     RRTEFAKMVKNPKYDDEATRDEYHLTAKDGDLHSQIVLLNGNELTVNSSGVIPLLEPI
                     RRNFSSPINVAPFSIVFVHIPNIQVPACT"
     misc_feature    598..1548
                     /gene="LOC139842239"
                     /note="Glycosyl hydrolase family 79, N-terminal domain;
                     Region: Glyco_hydro_79n; pfam03662"
                     /db_xref="CDD:461010"
ORIGIN      
        1 atgaggagaa caaggtcatc tagtcaagcg gcccaacaag gacaaggttc aaaccaagga
       61 agacaacaag cacccgtacc ggatcaaaat gatcctgctg tttggttagc ttatgtccgg
      121 gatcatgagg actacgcgga agaatatgaa tgggtgctca accaacacaa tcggctcatt
      181 ccctttgttc ctaggatgga accacctcaa aacccacccc gtgcccacga tcatgaagca
      241 ggtggtagcg gtgtcggacg agaaaatgtg caggaggagg ttcacatgga ggaacctgaa
      301 agtgaagaag aattacctca gtttcaaagg agaaggcgta ggcagacgca aaggacacgg
      361 gaagaagagt tggaggaagt gatttccggt tttcatgatt ttcaggttgg ttatcaacac
      421 agagacgacc aatatgaaga acaaagcatc aacagcacca gtagcctcaa catcatacgc
      481 ctcaacatca caatctatac cttgagcata atcttcgttc tacatatcat tctacttttg
      541 ctactcatgg tatgtttcgg ctcgaaaatg agtgtttcat taagggttga cattgtcgag
      601 ggtagcatac acgtaaacgg atcaagttca ataggttata tagatgatga tttcgtgtgt
      661 gctactttag attggtggcc accagaaaaa tgtgattatg gaacttgtag ttgggccaat
      721 gcttctcttc tcaatctgga tctcagtaac aaaatcttgt taaacgctat acaagcattt
      781 tctccattga aacttagact gggtggcact ttgcaagaca aagtggttta tgaaatgatt
      841 gaaggtcaag aactgtctcc taatttcact aagaacacta gtgtcatgtt tggcttcacc
      901 aatggttgtt tgaccatgtc aagatgggat caactcaatg ttttcttgaa aaattccggt
      961 gcaaaggttg tgttcgggtt gaatgcgcta cgcggtcgga ccatagggca agatggttca
     1021 atgtcaggtt catgggactc gagcaatgca gaagctctta taagatacac cgcgaacaag
     1081 ggatacacca ttaatggctg ggaacttgga aatgagctaa gtggaaacgg gataggaact
     1141 agtgtgacag caaaacagta cgcgttagat acaatttctc tccaaaatct agtgcagaag
     1201 atatacagag gatttcaaga aaagccgata gttcttggac caggaggatt ctacgatgca
     1261 aattggttca acgactatgt aactcaagcc tcaaattccc ttcaagtcat tactcaccac
     1321 atttacaacc ttggtccagg tgtcgacgat catttggttg aaaagatact tgacccgtca
     1381 tatcttgatg gcggatcaca accgtttaga gaccttcaaa acattttgaa gaaatctggt
     1441 acttcaactg tggcttgggt gggtgaagct ggtggtgctt ataatagcgg tcataatctt
     1501 gtgtctaatg ctttcgtcta tggcttttgg tacttggatc aactaggaat ggcatcaatg
     1561 tacgatacaa aaacgtattg tcgacaaaca ttgataggag gaaactatgg acttcttaac
     1621 actaccactt ttgttcctaa tcccgattac tacagtgcgc tactctggca ccggctaatg
     1681 ggaagacatg ttctactaac aagttttatc ggcacacaca aaatacgttc ttacgctcat
     1741 tgttcaaaaa tttcagcagg gatcacattg ctattgatta atctcgacgg ttatagagca
     1801 actaacattg gcatttctat tgaaaatggg actacaataa cgacatcaac ccaacaaaaa
     1861 acaaaacaca tgcgacgaac agaatttgca aaaatggtta aaaatcctaa atatgatgat
     1921 gaagccacaa gagacgagta tcacttaaca gcaaaagacg gagacttgca tagccaaata
     1981 gtattactaa acggaaatga attaactgtt aactcttcgg gagtgatacc tttgttagaa
     2041 ccgataagac gaaatttttc gagcccgatc aatgttgccc cgttctccat tgtattcgtt
     2101 catataccca atatacaagt tcctgcatgt acatga
//
LOCUS       XM_071832408             693 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative B3
            domain-containing protein REM4 (LOC139842240), mRNA.
ACCESSION   XM_071832408
VERSION     XM_071832408.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..693
                     /gene="LOC139842240"
                     /note="putative B3 domain-containing protein REM4; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139842240"
     CDS             1..693
                     /gene="LOC139842240"
                     /codon_start=1
                     /product="putative B3 domain-containing protein REM4"
                     /protein_id="XP_071688509.1"
                     /db_xref="GeneID:139842240"
                     /translation="MDGHRSKEGKEGKVGGMGEECVRAKFARSKGLLNGKRRIQVVLM
                     DEAQRTWHATIDTQFHLGSLREFIKNNDLKIHDECTFELIKHGKVPVFSVLIQRSKVV
                     GKRKRNDHSSKNEDALKVDDNRRFTAKFTPYCITNYRLRVPAKYVRSNGLHNGKRRAQ
                     VVLIDEAQRAWHATFDNSQFHLASLHEFMKNNDLKVEDECTFELIEHGKVPVFSVLIH
                     CCFVQHYCLGKD"
     misc_feature    <73..285
                     /gene="LOC139842240"
                     /note="DNA binding domains of BfiI, EcoRII and plant B3
                     proteins; Region: BfiI_C_EcoRII_N_B3; cl15242"
                     /db_xref="CDD:449517"
     misc_feature    370..648
                     /gene="LOC139842240"
                     /note="Plant-specific B3-DNA binding domain; Region:
                     B3_DNA; cd10017"
                     /db_xref="CDD:197383"
ORIGIN      
        1 atggatgggc atcgttcaaa agaagggaaa gaaggtaagg tgggagggat gggtgaagag
       61 tgtgttcgtg caaaatttgc aagatcaaaa ggattactta atggaaaaag gcgtatacaa
      121 gtagttctta tggatgaagc acaaagaact tggcacgcaa caatcgatac acaatttcat
      181 ttaggtagtt tgcgcgaatt tataaagaat aatgacttga aaatccatga tgagtgtacg
      241 tttgagctca taaaacatgg aaaagtgcca gttttcagtg ttctgataca aaggtcgaag
      301 gtggtcggaa agcgaaagag gaacgatcat tcgtcaaaaa atgaggacgc gcttaaagtt
      361 gatgataatc gtcgtttcac agctaaattc acgccgtatt gtatcacaaa ttatagattg
      421 cgtgttcctg caaaatatgt aagatcaaat ggattacata acggaaaaag acgtgcacaa
      481 gtagttctta ttgatgaagc acaaagggct tggcacgcaa cattcgacaa ctctcaattt
      541 catctagcta gtttgcacga atttatgaag aataatgact tgaaagtcga agatgagtgc
      601 acgtttgagc tcatagaaca tggaaaagtg cctgtattca gtgttctgat acattgttgt
      661 tttgttcaac attactgttt agggaaagat taa
//
LOCUS       XM_071832409            2538 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842242), mRNA.
ACCESSION   XM_071832409
VERSION     XM_071832409.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2538
                     /gene="LOC139842242"
                     /note="uncharacterized LOC139842242; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842242"
     CDS             1..2538
                     /gene="LOC139842242"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688510.1"
                     /db_xref="GeneID:139842242"
                     /translation="MASIKSQPSIATQNDDVSSLTSSLSLYPHPYTVNVANFVTVKLS
                     GYENYIIWKTQMLCLIEGHDMLGFITGDIQSPPETSPENVQRWRRSDALLRGWILGSL
                     TDNVLTEIITLKTAKDVWLHLETCYSNNDLSFSVMKDEVNGVDFKIESELMMMNMNTR
                     STQHSRSLPVPLRGVSQQIDLKGDSVTPGGDGRMNSMYRNSRGLGLGLENMVFAEDKS
                     WTGGSTGHVSFDLTEMTDYLHEPATNINAYLPLYKAALRGHWDDAQSIISQDKEAVTA
                     NINKYGFTALHIAVGTGRQGIFFVEKLVEMMSPKSLIQMLTLSEKYTPLHIAAVVGNT
                     PAVKILVNKNSKLLYTEDVDGLLPIHRALINSHKDTFLYLLSVTKGNQYPNTFSGNMG
                     VTLLSNVIFAGYFDIALDLCTRYPELATTTPSDNVDAPLMAIARKADAFESGCRLNFF
                     DSLIYKYVPDKLENLNSNKNHGKMNFFSSALQEISSGIWKVMGRIVPHITHIQKLKLV
                     HHQALTLVKCLCQEISALNLQSNSIHYSKPIIEAASNGAYEVVQEIADTFPQAIWYSD
                     NRSGHFMIQLAIVHRCEKVYNLIYQMSDHKHFHKTLKDSCNNNLLHLAGKLAPTQKLN
                     LVSGAALQMQRELQWFKEVETFVHPKYKTEKNSSEQTPEMLFSKEHKKLVRDGEEWMK
                     KTADSYTVTAGLITTIVFAAAITVPGGNNGDTGHPIYAKELSFLIFAVADAISLFTST
                     TSLLLFLSILTARYAEQDFLFTLPSRLILGLSTLFLSTTSMMIAFGASLYLLFGQGKD
                     WILIPIAALSCLPITCFVTLQFPLLVELISCTCGRGLFGKQSNRPFY"
     misc_feature    <724..1326
                     /gene="LOC139842242"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    order(754..759,766..774,778..783,793..795,802..804,
                     841..843,847..849,859..864,871..879,883..888,904..906,
                     913..915,943..945,958..960,964..966,976..981,988..996,
                     1000..1005,1015..1017,1024..1026)
                     /gene="LOC139842242"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    841..945
                     /gene="LOC139842242"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    958..1035
                     /gene="LOC139842242"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    2032..2373
                     /gene="LOC139842242"
                     /note="Domain of unknown function; Region: PGG; pfam13962"
                     /db_xref="CDD:433609"
ORIGIN      
        1 atggcttcca taaaatcaca accatcgatt gctactcaaa acgacgacgt atcgtcatta
       61 acatcatcat tatcgttata tccgcatccg tacaccgtca acgtcgccaa ttttgtaaca
      121 gtcaaacttt ccggctacga aaactacatc atatggaaaa cacaaatgct ctgtttaatc
      181 gaaggtcacg acatgctcgg attcatcacc ggcgatatcc aatcaccgcc ggaaacatca
      241 ccggaaaatg ttcagaggtg gcggagatcc gacgcgttac tccgcggatg gattctaggt
      301 tcattaactg ataacgtact tactgaaatc ataaccctaa aaactgcaaa agatgtatgg
      361 ctgcatttag aaacatgtta tagtaataat gatttaagtt tttcagtcat gaaagatgaa
      421 gttaacggtg tggattttaa aattgaaagt gaattgatga tgatgaatat gaatacgaga
      481 tctacacagc attcgaggtc gttaccggtt ccacttagag gtgtttcgca acagattgat
      541 ttgaaaggtg attcagttac tcctggtggt gatggcagga tgaatagtat gtataggaat
      601 tcaagagggt tagggttagg gttagaaaac atggttttcg cagaggataa aagctggacg
      661 ggtggttcta cgggtcatgt ttcgtttgat ctaaccgaga tgactgatta cttgcatgaa
      721 ccagctacaa acataaatgc ttacctcccg ctatataaag ccgctcttag aggtcactgg
      781 gacgatgcac aaagtattat aagtcaagat aaagaagcag tcacagccaa tatcaacaaa
      841 tatgggttca ccgcacttca cattgcagtt ggaacaggaa gacaaggcat tttctttgtt
      901 gagaaattgg tggagatgat gtcaccgaaa tcacttatac aaatgctaac gttgtcagaa
      961 aaatacactc ctctgcatat cgcagctgta gttggaaaca cgccggctgt aaagatcttg
     1021 gtgaataaaa atagtaaact gttgtatact gaagatgtgg atggtttatt gcccattcat
     1081 cgagctctta ttaattcaca taaagataca tttttatatc tattaagtgt cacgaaaggc
     1141 aaccagtatc ctaatacttt cagtggcaac atgggcgtca cacttttgtc taatgttata
     1201 tttgcaggat attttgatat agcgctagac ttatgcactc gttatcccga attggctaca
     1261 acgacaccat ctgataatgt agatgctcct ttgatggcta tagcaaggaa agcagatgcc
     1321 tttgaaagtg gatgccgcct caattttttc gatagcttaa tttataaata cgttcccgat
     1381 aagttggaga accttaattc aaacaagaac catgggaaga tgaacttctt cagttcagct
     1441 cttcaagaga tcagttctgg tatctggaaa gttatgggta ggatcgtgcc acatattaca
     1501 cacattcaga aactaaagct ggtccatcat caagctctta cactcgtgaa atgtctgtgc
     1561 caagaaatca gtgccttaaa tctccaatca aacagtatcc attattctaa accgatcata
     1621 gaggcggcaa gcaatggtgc ttacgaggtt gttcaggaga ttgctgatac atttccacaa
     1681 gcgatttggt acagtgataa tagaagtggc cattttatga ttcagttggc cattgttcat
     1741 cgttgtgaaa aggtttacaa tttaatttat caaatgagtg accataaaca ttttcacaag
     1801 acactcaagg attcttgcaa caataatctc ttgcatctgg ctggaaaatt ggctcctaca
     1861 cagaaactta atcttgtttc tggagcagca ttacaaatgc aacgtgaatt gcaatggttt
     1921 aaggaagtgg agacgttcgt gcatccaaag tacaaaaccg agaagaactc atccgagcag
     1981 acaccagaga tgctatttag caaagagcac aaaaaactcg tgagagatgg tgaagaatgg
     2041 atgaaaaaaa ctgcggattc gtacacagta acagcaggac tcattacaac aattgttttt
     2101 gcagcagcca ttacagtacc cggtggtaat aatggcgata cgggccatcc aatttatgca
     2161 aaagaattat catttttaat atttgctgtg gcagacgcaa tctctctttt cacatccact
     2221 acatcattat tactattctt atcgatccta acagcccgtt atgcagaaca agattttctc
     2281 ttcacattac cgtcaagact aatattggga ctctcgacgt tgtttctgtc cacaacgtca
     2341 atgatgatag cttttggagc gtcattgtat ctgttattcg ggcagggtaa agattggatt
     2401 ttgattccga tagctgcatt gtcgtgttta ccgattactt gttttgtgac attacagttt
     2461 ccgcttcttg tagaactaat atcgtgtact tgtggtcgag gacttttcgg taagcaaagt
     2521 aatcgaccat tttattga
//
LOCUS       XM_071832410             627 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842244), mRNA.
ACCESSION   XM_071832410
VERSION     XM_071832410.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..627
                     /gene="LOC139842244"
                     /note="uncharacterized LOC139842244; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842244"
     CDS             1..627
                     /gene="LOC139842244"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688511.1"
                     /db_xref="GeneID:139842244"
                     /translation="MNNRASNAISDSHVYEVSVTPLSEQSTTEEKDTVTWLKAGVVVS
                     TWIFIIISEPLLERVLKYELQIAYDAWQFLERKKFNDNKLSKTMELNAELHRLEIGDI
                     KLDKITTHLNNLGSTVEDLDLVMYAFNELNDKYPHIVNIILHSQPFLDLDTVRSMLTI
                     EEMTTNRKNRVFDNHATSSNPIVPVAQSTGIQPPSNNNKTSSDLTPMC"
     misc_feature    136..504
                     /gene="LOC139842244"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgaataacc gggcgtcaaa tgcaataagt gacagtcacg tctacgaggt gtccgtcacg
       61 cctctatcag aacaaagcac gactgaagaa aaagatactg tgacatggct caaagctggc
      121 gtcgttgtct cgacttggat atttattata atctccgaac cactgctaga acgagtcttg
      181 aaatacgagc ttcaaatcgc gtatgatgcg tggcagtttt tagaaagaaa aaaatttaat
      241 gacaacaaac tctcaaaaac tatggaactc aatgcggagc tccatcgctt ggaaatcggg
      301 gacataaaac tcgacaaaat aacaactcat ctcaacaatc tcggatccac agttgaagat
      361 ttggacctag ttatgtacgc cttcaacgaa ttaaatgaca aatacccaca tatcgtgaat
      421 attatacttc acagtcaacc gtttctcgac ttggataccg tgcgttccat gttaacaata
      481 gaagagatga cgacaaatag aaagaatcgt gttttcgaca accatgcaac gtcatctaac
      541 cccattgtac ccgttgctca atcgacgggt attcaaccgc catcaaacaa caacaaaacc
      601 tcgagcgatt taaccccaat gtgctag
//
LOCUS       XM_071832411            1281 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842245), mRNA.
ACCESSION   XM_071832411
VERSION     XM_071832411.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1281
                     /gene="LOC139842245"
                     /note="uncharacterized LOC139842245; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842245"
     CDS             1..1281
                     /gene="LOC139842245"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688512.1"
                     /db_xref="GeneID:139842245"
                     /translation="MREFYCYRIQHRKNEGTTLLRGGRLFQQYLVDSFTAVEEQRLKW
                     VRAHQNDLRIDLYHNICDAVTRGDTKASSIGKRIVLPSSHTRSPRYMIQNYQDAMALC
                     REYDNPDLFITFTSNPRWPEVEGMLCYIEGQKAPDRPDIVARLFKQKLDELMRDIMNV
                     HIFGKCQSGIYIIEFQKRGLPHVHMLIWLMPEYKCKSPSDIDEIISAEIPSQIEDPAG
                     YKVVTEYMLHGPCGGKHMGAACIIDRKCSKHFPKPYYAETTIDEDGYANYKHRNNGSK
                     SRAIKYLFKYLNKGPDRATIVIQENLRPTGESSAEIIIEVDEIKNYLDCRYISPCEAV
                     WRLFSFDIHFSKPSVLKLSYHLPNHHTVTLHDSESLPALLHRESIKETMFTQWFELNK
                     RDPNARKLTYAKIPTQYVWNQTTKHGNQENNGVA"
     misc_feature    13..561
                     /gene="LOC139842245"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgagagaat tctattgcta cagaattcag caccggaaaa atgaggggac caccctcctt
       61 aggggtggcc gattattcca gcaatattta gtggactctt ttacagctgt agaagaacaa
      121 aggctaaaat gggtccgggc tcaccaaaat gacttgcgta tcgacctata ccataacata
      181 tgtgatgctg ttacacgagg agataccaag gcttcatcaa ttggtaagag aatagtttta
      241 ccatcttcgc atacaagaag cccacgttat atgatccaga actatcaaga tgctatggct
      301 ttatgccggg aatatgacaa ccccgatttg ttcatcacct tcacctctaa ccctagatgg
      361 ccagaggtgg aaggtatgct ttgctacatc gagggtcaaa aagcaccaga ccgcccagat
      421 atcgttgcaa ggctattcaa acaaaagcta gacgaactca tgcgcgatat aatgaatgtc
      481 cacatatttg gaaaatgcca atcaggtata tatatcatcg aattccaaaa acgcgggtta
      541 cctcatgttc atatgctgat atggttaatg cctgagtaca aatgtaaatc accatctgat
      601 attgatgaga tcatttcagc ggaaataccc tctcaaatag aggatccagc gggatataaa
      661 gtggtcaccg aatacatgtt acatgggccg tgtggtggaa aacacatggg cgcagcctgc
      721 ataattgata ggaagtgttc aaaacatttc cctaaaccat attacgcgga gacaacgata
      781 gatgaagatg ggtacgctaa ctataagcac cgcaacaatg gatcaaaatc tagggcaatt
      841 aagtacttat ttaaatactt aaacaaaggg ccagacagag caacaatcgt tattcaggag
      901 aatctcaggc cgactggtga atcatctgcc gaaataataa ttgaggtaga cgaaatcaag
      961 aattacttgg attgtcgtta tatatctcca tgtgaagctg tatggcggtt gttttcattc
     1021 gacatccact tttcaaaacc atcagtcttg aaattatcct atcatctacc aaaccaccat
     1081 acagttacac tacatgattc agagagccta cctgcgctgc tacataggga aagtatcaaa
     1141 gaaacgatgt tcacccaatg gtttgagctt aacaagcgtg acccaaatgc acgaaaactg
     1201 acctatgcaa aaatacctac acaatatgtt tggaatcaga ctacaaaaca tgggaaccaa
     1261 gaaaacaacg gggttgcata g
//
LOCUS       XM_071832412            1245 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842246), mRNA.
ACCESSION   XM_071832412
VERSION     XM_071832412.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1245
                     /gene="LOC139842246"
                     /note="uncharacterized LOC139842246; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842246"
     CDS             1..1245
                     /gene="LOC139842246"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688513.1"
                     /db_xref="GeneID:139842246"
                     /translation="MVQPAKIGTSEVVDETSYVFVDQLQQGKQASVRVMICRSWDTHT
                     KTGKYLSTDFIASDEKGNVIQITAKNNTAHCFIHRLKEGSVYFLSDFDVVPNKPDYRL
                     LNDNQVMIQLQGSTRLRKQPTNDTRGFIRHPFNCIKFEALTPINDVVGYAVNVGSLVD
                     LKTGDTILEFDLANERPFFRSGEVLPTRPPVHCSIIGNREAQLPRNSDPLQYIIYSGS
                     GRPRNSRTVGIHEQPQLRKGLRGKVATIGANHAPRMFCTQIQENMFAPTEKTDGKVIN
                     PHNRFKIHLEVTDGTGEAVVVLFDETAEKLVKATAKSLVAELDEDSPSHVLPNPIANL
                     VNTSQTLLLKAGTHYEHGSHESFNCLRVLNSAPIDIETAATAKKDQTPAIEPPVSTPN
                     GKKWNLAVTTPAKESDRPNRRK"
     misc_feature    91..351
                     /gene="LOC139842246"
                     /note="A subgroup of uncharacterized plant OB folds with
                     similarity to the second OB fold, the ssDNA-binding domain
                     (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_A_like; cd04480"
                     /db_xref="CDD:239926"
     misc_feature    order(91..93,253..255,259..261,265..267,349..351)
                     /gene="LOC139842246"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239926"
     misc_feature    order(106..114,157..168,172..174,193..201,250..252,
                     274..282,325..333)
                     /gene="LOC139842246"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239926"
     misc_feature    <112..963
                     /gene="LOC139842246"
                     /note="replication factor-a protein 1 (rpa1); Region:
                     rpa1; TIGR00617"
                     /db_xref="CDD:273177"
     misc_feature    <802..1140
                     /gene="LOC139842246"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(850..861,865..867,883..891,895..897,1009..1011,
                     1030..1038,1066..1074)
                     /gene="LOC139842246"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(1012..1014,1018..1020,1024..1026,1096..1098)
                     /gene="LOC139842246"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggtgcaac cggctaaaat tggtacctca gaagttgttg atgaaacttc atacgtattc
       61 gttgaccaac tccaacaagg aaagcaagcc agtgtaaggg ttatgatatg tagatcctgg
      121 gacacccaca caaaaaccgg aaagtatttg tccacagact ttatcgcttc agatgaaaag
      181 gggaatgtaa tacagattac agcaaaaaat aataccgctc actgttttat tcataggcta
      241 aaagagggtt ctgtttattt tctatctgat tttgatgttg ttccaaacaa accagactat
      301 cgtctcctca atgacaacca ggttatgatt caattacaag gttcaacgcg cctcagaaaa
      361 cagcccacta atgacacgcg tggtttcatc cgccaccctt tcaattgtat caaatttgag
      421 gctctcactc ctataaatga tgtggtggga tacgccgtga atgttggttc ccttgtagac
      481 ctgaagacgg gtgatacaat cctggaattt gatttggcta atgaaaggcc gttctttcgt
      541 tcaggggaag tcctcccaac cagacccccg gtgcattgtt ctatcatcgg taaccgtgaa
      601 gcacaattac ccaggaactc tgaccctctc cagtacatca tctactctgg ttctggaaga
      661 ccccgcaatt cccgtactgt aggaattcat gaacaacctc agctaagaaa gggattacga
      721 ggcaaggtgg ccactattgg tgctaatcat gctccaagga tgttctgtac ccaaatacaa
      781 gaaaacatgt ttgctccaac tgaaaaaact gacggtaagg tcattaatcc ccataacagg
      841 ttcaaaatcc atctggaagt gacagacgga acaggggagg ctgtcgtcgt attatttgac
      901 gagacagcag aaaagttggt gaaagccacc gctaaatctc tggttgcaga gcttgatgag
      961 gactccccta gccacgtctt acctaacccg atagcgaacc tcgtcaatac ctcccagacg
     1021 ctactactca aggcagggac acactacgag cacggttccc atgaaagctt caactgtctt
     1081 cgagtgttga actccgcccc catcgacatt gaaaccgctg caacagccaa gaaagaccag
     1141 actccagcca tagaaccacc tgtttctaca cccaacggga aaaaatggaa cctggccgtc
     1201 actactcccg caaaggaatc agaccgtccc aaccgtcgaa agtaa
//
LOCUS       XM_071832414            1323 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842247), mRNA.
ACCESSION   XM_071832414
VERSION     XM_071832414.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1323
                     /gene="LOC139842247"
                     /note="uncharacterized LOC139842247; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842247"
     CDS             1..1323
                     /gene="LOC139842247"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688515.1"
                     /db_xref="GeneID:139842247"
                     /translation="MILTESQIQNYCLAEIQMLLNKNGKALSNFPDMPQPDPSLLTQL
                     DNHLIREELNYNIQEMKTIHDSLYKCLNPEQLKVYESVIRAINEQLVGLFFVYRPGGT
                     GETFLYNTILTKLRSERLIVLAVASSCIASLLLPSSRTAHNRFVIPLELLENSTCGIK
                     QNTHLAALLYEVRLIIWDEAPMTQKYAFEALDKTLRDILGTKDHQNRGKIFGGLPILN
                     GGDFRQILPVIPKDIGDGKLPAQVREGEDEPTWIQIPQEFLLTPDPTPIESIVDAIFP
                     EFNLNQTDDDYFRQCAILTPRNDDVAEINKHIFKRLTGVPPHKLKLKIGQPVMLLRNI
                     NLSAVETWRYSVSPLLYLVRDDYLSGCDWHSAHASLGADLHVISFGIRTIGLLECDGH
                     SVHAYPRGILTECDVHSARAFLEGPDIKHVDDTFKNFKVIYNTTARLK"
     misc_feature    211..1014
                     /gene="LOC139842247"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(301..318,532..534)
                     /gene="LOC139842247"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgatcctca ccgagtcaca aattcaaaat tattgtttgg cggaaataca gatgctttta
       61 aacaaaaacg gtaaggcatt atcaaatttt ccagacatgc cccaaccaga cccgtccctc
      121 ctaacccagc tagacaacca tttaatccga gaagagttaa actacaacat acaggaaatg
      181 aagaccatcc acgatagcct ttacaagtgt ttgaaccctg aacaacttaa agtctacgaa
      241 agcgttattc gagccatcaa tgaacaacta gttggcttgt tttttgtgta ccggccaggg
      301 ggtaccgggg aaactttctt atacaacacc atcctcacca aattaaggtc agaacgactt
      361 attgtacttg ccgttgcttc atcatgtatc gcttccttgc tgttacccag cagcaggact
      421 gcgcacaaca gatttgtaat ccccctagag ttgttggaaa atagcacctg cggtataaaa
      481 caaaacacac atttagctgc actactttac gaagttaggc taataatatg ggatgaagct
      541 cctatgactc agaaatatgc ttttgaagcg ttagacaaaa cattgcggga tattctgggc
      601 actaaagatc atcaaaacag aggaaaaata tttggaggtc tgcctatttt gaatggagga
      661 gactttcggc agatcttacc cgtgatacca aaagacatag gagatgggaa actacctgct
      721 caggtaagag aaggggagga cgaaccaaca tggattcaaa ttccacaaga atttcttctc
      781 acaccagacc caaccccaat cgaatccatt gttgatgcta tattcccgga attcaaccta
      841 aaccaaactg acgatgatta ttttcgccag tgcgcaattt taaccccaag aaatgatgat
      901 gtagctgaga ttaacaaaca tatctttaaa aggctcacag gtgtccctcc acacaagcta
      961 aaactaaaaa taggccagcc tgtcatgctt ttgcgcaaca taaacctaag cgctgttgaa
     1021 acctggagat actcagttag tccactgctt tatcttgtga gggacgatta tctctcgggt
     1081 tgcgactggc actcggctca tgcatctctt ggggccgatt tgcatgtcat ttcatttggt
     1141 atcagaacca taggcctctt ggagtgtgac ggacactcgg ttcatgcata tcccaggggt
     1201 atcctcacag aatgtgatgt gcacagtgct cgtgcatttc ttgagggtcc cgatataaag
     1261 catgtagacg acacattcaa aaatttcaag gtcatttaca acactacagc taggctgaaa
     1321 tga
//
LOCUS       XM_071832415            1236 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842248), mRNA.
ACCESSION   XM_071832415
VERSION     XM_071832415.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1236
                     /gene="LOC139842248"
                     /note="uncharacterized LOC139842248; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842248"
     CDS             1..1236
                     /gene="LOC139842248"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688516.1"
                     /db_xref="GeneID:139842248"
                     /translation="MLCYIEGQKAPDRPDIVARLFKQKLDELMRDIMNVHIFGKCQAG
                     IYIIEFQKRGLPHVHMLIWLMPEYKCKSPSDIDEIISAEIPSQIEDPVGYKMVTEYML
                     HGPCGGKHMDAACIIDRKCSKHFPKPYYAETTIDEDGYANYKRRNNGIKVSKGKATLD
                     NSFVVPYNRFLLLKYNAHINVEWCNRSRAIKYLLKYLNKGPDRATIVIQENLRPTGES
                     SAETIIEVDEIKNYLDYRYISPCEAVWLLFSFDIHFSKPSVLKLSYHLPNHHTVTLHD
                     SESYMRCYIGKTTKTWEPRKQRGCIGRIVYSHPASGERYYLRMLLNIVKGPRSFEELR
                     TVDGTIHDTFKDTCFAYGLINDDKEWAEAISEAKLWASGAQLRDLFVTMLLFCNVSQP
                     LTLWEVSWEALSDDILHKK"
     misc_feature    <34..186
                     /gene="LOC139842248"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgctttgct acatcgaggg ccaaaaagca ccagaccgcc cagatatcgt tgcaaggcta
       61 ttcaaacaaa agctagacga actcatgcgc gatataatga atgtccacat atttggaaaa
      121 tgccaagcag gtatatatat catcgaattc caaaaacgcg ggttgcctca tgttcatatg
      181 ctgatatggt taatgcctga gtacaaatgt aaatcaccat ctgatattga tgagatcatt
      241 tcagcagaaa taccctctca aatagaggat ccagtgggat ataaaatggt caccgaatat
      301 atgttacatg ggccgtgtgg tggaaaacac atggacgcag cctgcataat tgataggaag
      361 tgttcaaaac atttccctaa accatattac gcggagacaa cgatagatga agatgggtac
      421 gctaactata agcgccgcaa caatgggatc aaagtcagta aagggaaggc aacacttgac
      481 aacagtttcg tcgtccctta caatcgattt ctgctactca aatacaatgc ccatataaat
      541 gtcgagtggt gcaacagatc tagggcaatt aagtacttat tgaaatactt aaacaaaggg
      601 ccagacagag caacaatcgt tattcaggag aatctcaggc cgactggtga atcatctgcc
      661 gaaacaataa ttgaggtaga cgaaatcaag aattacttgg attatcgtta tatatctcca
      721 tgtgaagctg tatggctgtt gttttcattc gacatccact tttcaaaacc atcagtcttg
      781 aaattatcct atcatctacc aaaccaccat acagttacac tacatgattc agagagctac
      841 atgcgctgct acatagggaa aactacaaaa acatgggaac caagaaaaca acggggttgc
      901 ataggccgta ttgtgtattc acaccccgcc tctggagaaa ggtactatct gagaatgttg
      961 ttaaacatag ttaaaggtcc tcgctctttt gaagaactac gcacagtaga tggaacaata
     1021 cacgacacct ttaaagatac ctgctttgca tatggactga ttaacgacga caaagaatgg
     1081 gcagaagcaa tatcagaggc aaagttatgg gcgtccggtg ctcaacttcg ggatttgttc
     1141 gtcaccatgt tacttttttg taatgtcagc cagccactca cactatggga agttagttgg
     1201 gaagcgttat cagatgatat cctgcataaa aaatga
//
LOCUS       XM_071832416            1665 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides O-acetylstemmadenine
            oxidase-like (LOC139842250), mRNA.
ACCESSION   XM_071832416
VERSION     XM_071832416.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1665
                     /gene="LOC139842250"
                     /note="O-acetylstemmadenine oxidase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842250"
     CDS             1..1665
                     /gene="LOC139842250"
                     /codon_start=1
                     /product="O-acetylstemmadenine oxidase-like"
                     /protein_id="XP_071688517.1"
                     /db_xref="GeneID:139842250"
                     /translation="MAGFYEHIGRKSMLNKTFNFNCFCTKEFSKPLDDNFLQCVIKYD
                     PNATRSNFVFTQKHTQYSSVLESSIINLRFSTSTTPKPIAIITPLSYSHVQSAILCSK
                     RFGYRIRIRSGGHDYAGVSHTSYEHDVPFIVLDLKELRKITIESGQNTAWVESGSTLG
                     ELYHRVGQESQNLGFPAGVCPTVGVGGHLSGGGFGTMIRKYGLAADNVIDAKIIDVNG
                     RILDRKSMGEDLFWAIRGGGGASFGGVVAWKVNLVYVPDKVSVFSISKTLEQGGSSLF
                     NKWQYVGSEFNQDLFIRVIIQPVWTGNRTMQVTFNSMFLGTVDKLIETVKVSFPELGL
                     EEKDCSEMSWVESILYFAGYKIGSVDVLKDRKHEAKSYFYAKSDYVKEPIPEGRLGEI
                     WKWCLEGDNPILIMEQHGGKMSEIEKTRIPYRYRNGYLYNIQYLEKWQDGSVESFEKH
                     TSGMRRIYENMTPYVSKNPRGAYVNYRDLDLGRNNNAKTTSYMEAMIWGNKYFGDNFK
                     RLAMVKGVVDPDNYFYFEQSILPLTISKRNNDIGSYQRSAAKSRFL"
     misc_feature    244..666
                     /gene="LOC139842250"
                     /note="FAD binding domain; Region: FAD_binding_4;
                     pfam01565"
                     /db_xref="CDD:426326"
     misc_feature    1414..1587
                     /gene="LOC139842250"
                     /note="Berberine and berberine like; Region: BBE;
                     pfam08031"
                     /db_xref="CDD:369658"
ORIGIN      
        1 atggctggct tctatgaaca cattggaaga aaatcaatgt tgaacaaaac ttttaatttc
       61 aactgtttct gcacaaaaga attttcaaaa ccactagatg ataactttct tcaatgtgtt
      121 attaagtatg atccaaatgc aacaagatca aattttgtgt tcactcaaaa acacacacaa
      181 tattcatctg ttcttgagtc atcaatcata aacctaagat tttcaacatc aacaactcca
      241 aaaccaatag ctataatcac accattatca tattctcatg tacagtcagc aatactctgt
      301 tccaaaagat tcggatatcg aattcgaatt cgaagtggtg gacatgacta tgcaggagtt
      361 tcacacactt catatgaaca tgatgtaccc tttatagttc ttgaccttaa ggaacttaga
      421 aagataacaa tcgaatcggg tcaaaacact gcatgggtcg aatccgggtc aactttaggt
      481 gagttgtatc accgggtggg tcaagaaagt caaaatcttg gattcccagc tggggtgtgt
      541 ccaactgttg gagtcggtgg tcatttaagt ggtggtgggt ttggtactat gattagaaag
      601 tatggtttag ctgctgataa tgttattgat gctaagatta tcgatgttaa cggtcgaatt
      661 ctcgatagga aatcgatggg ggaagatttg ttttgggcga ttagaggtgg tgggggggct
      721 agttttggtg gtgttgtagc ttggaaggta aatcttgttt atgttcctga taaagtttcg
      781 gtttttagca tttcaaagac tttagaacaa ggcggttcga gtctttttaa caagtggcag
      841 tatgtaggat ctgaatttaa tcaagatttg ttcattagag ttataataca gccggtttgg
      901 accggaaata gaacgatgca agttacgttc aattcaatgt ttcttggaac ggttgataag
      961 cttattgaaa ctgtcaaagt tagttttcct gaactagggt tggaggaaaa agattgtagc
     1021 gaaatgagtt gggtcgagtc gatactttat ttcgcgggtt ataaaatagg aagtgtagat
     1081 gttttgaaag ataggaaaca cgaggcgaaa agctactttt atgcgaaatc ggattacgtt
     1141 aaggaaccga tacccgaagg aaggttaggg gagatatgga aatggtgttt ggagggcgat
     1201 aacccgattt taataatgga acagcatggt gggaaaatga gcgagatcga aaaaacgcga
     1261 ataccatacc gatatagaaa cgggtatttg tataacatac aatacctcga aaagtggcaa
     1321 gatgggagcg ttgaatcgtt tgaaaaacat acaagtggaa tgagacggat ttacgagaat
     1381 atgacaccat atgtgtcgaa gaatccgagg ggagcttatg tgaattacag ggatttggat
     1441 ttgggtagga ataataatgc taaaaccact agttatatgg aagctatgat atggggaaac
     1501 aagtattttg gtgacaattt taagaggtta gctatggtta agggtgttgt tgatcctgat
     1561 aattacttct attttgagca gagtatccta cctttaacaa ttagtaaaag aaacaatgac
     1621 ataggttctt accaaagatc ggctgcaaaa tcgcggttct tgtaa
//
LOCUS       XM_071832417            2766 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842251), mRNA.
ACCESSION   XM_071832417
VERSION     XM_071832417.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2766
                     /gene="LOC139842251"
                     /note="uncharacterized LOC139842251; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842251"
     CDS             1..2766
                     /gene="LOC139842251"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688518.1"
                     /db_xref="GeneID:139842251"
                     /translation="MAEAIDFTRTQRIVLLVDLNPLLHSPNPNPNPNYITSILTTSKI
                     ILSFNSISSSLFSFKFFISSLSPLLSASALHRILPNHHHSVSLSFSSPSQTLISLSET
                     LNSIVSTQPTYSASNFSHVAGSLLQLAHDYDWKSDIDDPSGKICYDFLNLRSNLIVLL
                     SPIRRSVNDLAESMCVNVFENLDCYRVRFRDCFSVVKDIFNSKDIHLSWIDVQSDEEN
                     LEVSEIEECALIRNEIRKLGWRICSTDSIILGSALVPFGLMYPNIVVSSKLVDDFKAS
                     KMIRGQLSLEITDVSGKPLECKCCDLELLHLKLSSKLGSDVLSNLNDGTLKLHVTTVR
                     KYTEFVNFDELSSHFFLVQSAVSGKKGKDFLDNLVADRVLELLAYDNLKLLDKHAVPT
                     WQIFLSFLYREGYWALLSLSNSNGDSCTGIIKPFTIHSAILLLVDNNDPVIQDSGGVN
                     FVLNENGSQGDTDCQKGTSQLGKFVHVSYGKRKKVKKHTYRDLTWSLFYKAAYEFMDV
                     DLAEVFFANGCKKSKKLKFLKCWMNQVKNQSLPHKNMSHRSCDTAPVSYQLNEIDLNE
                     NFAANYQDSDEPLSMLECSDPSKLQDATASVSCSETLEAFFSNLPMKIKQGLESDGVD
                     LKILAERLVSSSIYWLHKKHETMEDHDESITTQIAEIIKLLLREPKDLKEDKSQASTS
                     EYLVREYPSADFTVLFRSIKGSMKMKFVKQICSLLEIVQYLVDGGIHGDVSLYDYVEN
                     TIKTRYSHNLGDVVDIIYDRMDLLPFGEEDEVQALMFNSDDSNQSFKEKSDRAASKMI
                     KDSISVEDESSHLLDNDITHEGHAKEEHDRKLNEARERRERARRFVSCTSRMPDLQRV
                     WAPKQSKAIKAKPEPKRKKQCKGSYSVVCETPLTRNDPSCYRIKNNGERSKPCNPVSK
                     ALFQDDS"
ORIGIN      
        1 atggcggaag caatcgattt cactagaaca caacgcatag ttcttctagt tgacctcaat
       61 cccttactcc attctccaaa ccctaaccct aaccctaatt acatcacttc aattctcaca
      121 acttcaaaaa taattttatc tttcaattca atttcatctt cactattttc cttcaaattc
      181 ttcatttcat cgctttcgcc ccttctttct gcatctgcac ttcaccgcat acttccaaat
      241 catcatcatt ctgtatctct atctttcagt tcaccgtcac aaaccctaat ttcgctttct
      301 gaaaccttaa attcgatcgt gtccacacaa cctacgtatt ctgcttcaaa cttctctcac
      361 gtagctggtt cattgcttca gcttgctcat gattatgatt ggaagtctga tattgatgat
      421 ccttctggta aaatttgtta tgatttttta aatttacggt cgaatttgat tgttttgttg
      481 tctccgattc gtcgatcggt taacgattta gctgagtcta tgtgtgttaa tgtatttgag
      541 aatttagact gttatcgtgt ccgatttcgt gattgtttca gtgttgttaa agatattttt
      601 aatagtaagg atattcattt gagttggatt gatgttcaaa gtgatgaaga gaaccttgaa
      661 gttagtgaaa ttgaggagtg tgctcttatt aggaatgaga ttaggaaatt gggttggaga
      721 atttgttcaa cagattcgat tattttaggt tctgctcttg ttccttttgg tttgatgtat
      781 ccaaatatcg tggtgtcgtc taagttggta gatgatttta aagcaagtaa gatgattcgt
      841 gggcaattaa gccttgaaat tacggatgtt agtggtaaac ccttggagtg caaatgttgt
      901 gatcttgaat tgttgcattt aaagttatcg tctaagctgg gatctgatgt tttgagtaat
      961 ttgaatgatg gaactttgaa gttgcatgtc acaactgttc gaaagtacac tgagtttgtt
     1021 aattttgatg aattatcatc acactttttc ttagttcaat cagcagtgtc tggcaaaaaa
     1081 gggaaggatt ttttagacaa tcttgttgct gatagggttc ttgaattact tgcctatgat
     1141 aatttaaagt tattagataa gcatgctgtt ccaacttggc agatctttct tagttttctt
     1201 tatagggaag gttactgggc cttgttatct ttatcaaata gtaatggaga ttcttgtaca
     1261 gggattatca aacccttcac aattcattca gccatcctac tacttgtgga taataacgat
     1321 cctgtcatac aagattccgg tggagtaaat tttgtactga atgaaaatgg ttctcaaggt
     1381 gataccgatt gtcaaaaggg tacatctcaa ttgggaaaat ttgttcatgt aagttatggg
     1441 aaacgaaaaa aggtgaaaaa acatacatac cgagatctca catggagctt attctacaag
     1501 gcagcgtatg agttcatgga tgtggactta gcagaggtat tctttgccaa tgggtgtaaa
     1561 aagtcaaaga agttgaagtt tttgaaatgt tggatgaatc aagtgaaaaa tcaaagctta
     1621 cctcacaaga acatgtcgca taggtcatgt gatacagctc cagtttcata tcaactgaat
     1681 gagatagatc ttaatgagaa ttttgcagct aattaccaag atagtgatga acctttgtca
     1741 atgctcgagt gttccgatcc atcaaaattg caggatgcta ctgcatctgt atcttgttca
     1801 gaaactttag aagctttttt cagtaattta cctatgaaaa tcaaacaagg gcttgaatct
     1861 gatggagtag atttgaagat attagcagag agacttgtaa gctcatctat ttactggtta
     1921 cataaaaaac atgaaaccat ggaagatcat gatgaatcta ttaccacgca aattgctgaa
     1981 attattaagt tattactacg tgagcccaaa gatttgaaag aagacaaaag tcaagcttct
     2041 acctcagaat atttggttcg agagtatcct tcagctgatt tcactgtttt atttagaagt
     2101 ataaaggggt ccatgaagat gaaatttgtg aagcagattt gctcccttct ggagatcgtt
     2161 caataccttg tggacggagg gattcatggt gacgtgagtc tttatgatta tgttgagaac
     2221 accataaaaa caaggtattc gcataatctt ggagatgtag tagacataat ctatgatcga
     2281 atggacctct taccatttgg tgaagaagat gaagttcagg ctctcatgtt taacagtgac
     2341 gatagcaatc agtcttttaa agaaaagtct gacagggctg caagtaaaat gattaaagat
     2401 tcgatatctg tagaagatga atcttctcat ctacttgaca atgacataac tcacgaagga
     2461 cacgccaaag aggaacatga cagaaagtta aatgaggctc gtgagaggag agaaagggct
     2521 agaaggtttg tatcatgcac gagccgaatg cctgatttac aaagggtttg ggctccaaag
     2581 caatctaagg ccataaaagc caaacccgaa cccaaaagga agaaacagtg taaaggtagt
     2641 tatagtgttg tttgtgaaac tccattgaca cgtaacgacc cttcgtgtta taggataaaa
     2701 aataacggtg aacggagtaa gccttgtaat cctgtttcca aggcattatt tcaagatgac
     2761 agttga
//
LOCUS       XM_071832418             399 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides EG45-like domain containing
            protein 2 (LOC139842252), mRNA.
ACCESSION   XM_071832418
VERSION     XM_071832418.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..399
                     /gene="LOC139842252"
                     /note="EG45-like domain containing protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:139842252"
     CDS             1..399
                     /gene="LOC139842252"
                     /codon_start=1
                     /product="EG45-like domain containing protein 2"
                     /protein_id="XP_071688519.1"
                     /db_xref="GeneID:139842252"
                     /translation="MAIAAILSLFILLSINNNNVKYAWGDIGTASSYNPPYTPTKCNG
                     NQQDQFPSGNLFVSVSEGLWDNGAACGRRYRLKCLSGNNKPCKDRTIDVRVVDFCSRR
                     PCPSTMVLSNDAFSAISKSQRGKINVEYVE"
     misc_feature    76..393
                     /gene="LOC139842252"
                     /note="double-psi beta-barrel fold of EG45-like
                     domain-containing proteins; Region: DPBB_EG45-like;
                     cd22269"
                     /db_xref="CDD:439249"
ORIGIN      
        1 atggcaatag ctgcaatttt gagcttattt attttactaa gtattaataa taataacgtc
       61 aagtatgcat ggggtgatat cggtactgct tcttcttaca accctcctta cacgcctaca
      121 aagtgtaatg ggaaccaaca agatcaattt ccatcaggga acttattcgt atctgttagt
      181 gaaggactat gggataacgg ggcagcatgc ggaaggcgtt acaggttaaa atgtttgagt
      241 ggaaataata aaccgtgcaa agataggacc attgatgtta gggtggttga tttttgttcc
      301 agaaggccat gtccatccac tatggttttg tccaatgatg ccttttctgc catatccaaa
      361 tctcaaaggg gaaaaattaa cgttgaatat gttgagtga
//
LOCUS       XM_071832419             339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glucan
            endo-1,3-beta-glucosidase-like (LOC139842254), mRNA.
ACCESSION   XM_071832419
VERSION     XM_071832419.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..339
                     /gene="LOC139842254"
                     /note="glucan endo-1,3-beta-glucosidase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139842254"
     CDS             1..339
                     /gene="LOC139842254"
                     /codon_start=1
                     /product="glucan endo-1,3-beta-glucosidase-like"
                     /protein_id="XP_071688520.1"
                     /db_xref="GeneID:139842254"
                     /translation="MAALTLPFTFTSFLCFIISFNHVQGQERIPTDRWCVAQFNARED
                     VLVAFIEEKCTFLYCKPIMPGGSCYQPTTLINHASYVIDVNYKATGECDLNIAQFALT
                     DPSFGRCRYP"
     misc_feature    100..333
                     /gene="LOC139842254"
                     /note="Possibly involved in carbohydrate binding; Region:
                     X8; smart00768"
                     /db_xref="CDD:197867"
ORIGIN      
        1 atggcggcac taactttacc atttaccttc acttcattct tgtgcttcat tattagcttc
       61 aatcatgttc aaggccaaga gagaatccct acggatcgat ggtgtgtagc tcaatttaac
      121 gcccgggagg atgtgctggt agcatttatt gaagaaaaat gtacgtttct ttattgtaaa
      181 ccgatcatgc ctggaggatc gtgttatcaa ccaactactt tgataaatca tgcatcctac
      241 gttatcgatg ttaattataa ggccacgggt gaatgtgatt taaatatcgc gcaattcgct
      301 ctcactgatc cttctttcgg acgttgtcgc tacccatga
//
LOCUS       XM_071832420             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842255), mRNA.
ACCESSION   XM_071832420
VERSION     XM_071832420.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139842255"
                     /note="uncharacterized LOC139842255; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842255"
     CDS             1..783
                     /gene="LOC139842255"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688521.1"
                     /db_xref="GeneID:139842255"
                     /translation="MAEKMGIKSLKVSVDSQLVANQMNGTFEARDPVIQKYLRLTEEM
                     ANKFEFFSITQVPRSMNKKADALSKLATSVFSHFSKDVWVEVLCQKSTDVVQEVAPVE
                     EVETWMSPIITYLKTRTLPVDGAAARKIRMKAPLYMLREGVLFKKSFTAPLLRCVGPN
                     EAETIVREVHEGTCCMHAGFRTVVGKIMRLRYFLPSMYRDMKEIIKACVSCQHQAPQI
                     HMPAHELIPITSAWPFYKWAIDLVGTFPDGNHLVVAIDFFIK"
     misc_feature    <4..213
                     /gene="LOC139842255"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    469..651
                     /gene="LOC139842255"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggctgaga agatggggat taaaagcctg aaggtatcgg ttgattctca gctcgtggcg
       61 aatcagatga acgggacgtt tgaagctaga gatccagtca ttcagaaata tttgagattg
      121 acggaggaaa tggccaacaa atttgagttt ttctcaataa cgcaagtacc gcgatccatg
      181 aataaaaaag ccgacgcgct tagtaaactc gcaacaagcg tgttcagtca cttctccaaa
      241 gacgtttggg tggaggtcct atgtcaaaag tccactgacg tggtacagga agtggccccc
      301 gtagaggagg tcgagacatg gatgagtccc atcattacat atcttaagac caggacgttg
      361 ccagttgatg gggcagcggc gcgtaagatt cgtatgaaag cacctttgta catgttaagg
      421 gagggagttt tgttcaagaa atccttcacg gcaccacttt taagatgtgt cggtccgaat
      481 gaggcagaaa caatcgtaag ggaggtgcat gaagggactt gttgcatgca cgcagggttt
      541 aggaccgttg tgggaaagat aatgcggtta aggtattttt tgccttcaat gtaccgtgac
      601 atgaaagaaa tcattaaagc ttgtgtttca tgccaacatc aagctccgca aattcacatg
      661 ccggcacatg agctaatccc catcacgtct gcttggcctt tttacaaatg ggcgattgat
      721 ttggtaggaa ccttcccgga tggaaaccac ctggtcgttg caattgactt tttcattaag
      781 tga
//
LOCUS       XM_071832422             843 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842257), mRNA.
ACCESSION   XM_071832422
VERSION     XM_071832422.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..843
                     /gene="LOC139842257"
                     /note="uncharacterized LOC139842257; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842257"
     CDS             1..843
                     /gene="LOC139842257"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688523.1"
                     /db_xref="GeneID:139842257"
                     /translation="MLGSLDCMHSAWKNCPYRYKGHYTRGDHGYPTIMLEVVASYDLW
                     IWHAYFGPAGSNNDINVLNRSDLFNDLLQDTTPPCIFSVSECNFNKCYYLTDGIYPEW
                     ATLVKSFKSPPTPEAAKFKRFQEVARKDTERAFGVLQGRWTIIKNSCRQFYVERIRRI
                     MRTCVILHNMIIEDNGRAMCDLEENYNLACRPRRSIKERVQAHIHANKELRDSTIHHL
                     LRQKLIEHIWNLSANFRIRHVPQVGPSSTTANDDQDEDQDEEEDEDDEENEDEDDECD
                     EDDE"
     misc_feature    1..528
                     /gene="LOC139842257"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgttaggta gtctagattg catgcattcg gcatggaaaa attgcccata tagatacaaa
       61 ggtcattata caagaggaga tcacggatac ccaacaatca tgttagaagt ggttgcatca
      121 tatgacttat ggatttggca cgcttacttt ggacccgccg gttcaaacaa cgacataaat
      181 gtgcttaatc gatctgattt atttaacgat ctacttcaag acacgacacc tccgtgtatt
      241 ttttcggtta gtgagtgtaa tttcaataaa tgttattatt taaccgatgg gatatatcct
      301 gaatgggcga ctttggttaa gtctttcaaa agtccaccta cccctgaagc agcaaaattt
      361 aagaggtttc aagaagttgc ccgaaaagat actgaacggg ctttcggagt gcttcaaggt
      421 cgttggacaa taattaaaaa ctcttgccga caattctatg ttgaaagaat ccgaagaatt
      481 atgcgcactt gtgttatatt acataatatg atcatcgagg acaacggaag ggcaatgtgt
      541 gaccttgaag aaaattataa tctcgcttgt cgtccaagaa gatccattaa ggaaagggtt
      601 caagcgcaca ttcacgctaa taaagaattg cgagattcga ccattcacca tcttctacga
      661 caaaagctca tcgaacacat ttggaatctt tcggcgaatt ttcgtatccg acacgtacca
      721 caagtgggac cttccagtac aaccgccaat gatgaccaag acgaagacca agacgaagag
      781 gaagacgaag acgacgaaga gaacgaagac gaggacgacg aatgtgatga agatgatgag
      841 tag
//
LOCUS       XM_071832423            1119 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842258), mRNA.
ACCESSION   XM_071832423
VERSION     XM_071832423.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1119
                     /gene="LOC139842258"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139842258"
     CDS             1..1119
                     /gene="LOC139842258"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688524.1"
                     /db_xref="GeneID:139842258"
                     /translation="MVFNTVFGIILYDIVNTENNVDEINKSKTYLKSKFLITDLGKLK
                     YFLSIEVSNNTDGVCLSQRKYCLDILVDYGMTGCKPVSTSMEQNLCVACEPSASDKHV
                     ANINEYQKLVGRLMYLTLTRHDISFAVHVFSQYMHSPLQSHSDLAFRVLRYLKGAPGK
                     GIQIVKGNDFNLNAYCDSDSGKCKLNRKSVTGYLVFFCNSLTSWKSKEKQATISRSSA
                     KAEYRAMGTAASEIVWIKNLLLGIHIELPVKLHCHNTSAIQIAANPVYHERTKHFEID
                     MHFIREKVSSGLIKTVKVDSSNQLEDILIKGSGSYQHNVLSNALGLKDFSRGGLSLLT
                     RGRKPVRCNSAHRVAEAVGERGFTAHVLGDERVSGLVP"
     misc_feature    <10..258
                     /gene="LOC139842258"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    520..918
                     /gene="LOC139842258"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(529..540,646..654,661..663,757..759,835..837,
                     916..918)
                     /gene="LOC139842258"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggttttca acacagtatt tgggattatt ctctatgaca ttgttaacac tgaaaataat
       61 gttgatgaaa taaataagtc taaaacttat ttaaagtcta agtttttaat tacagatctt
      121 ggaaaattga agtatttcct tagcattgaa gtgtcgaata atactgatgg tgtttgcttg
      181 tctcaaagaa agtactgttt agatattctt gttgattatg gtatgactgg ttgtaaacct
      241 gttagtactt caatggaaca aaatttatgt gttgcttgtg aaccaagtgc tagtgacaaa
      301 catgttgcaa atatcaatga gtatcaaaaa cttgttggaa ggttaatgta tcttactctt
      361 accaggcatg atatttcttt tgctgtacat gtatttagtc agtatatgca ttcaccttta
      421 caatctcatt ctgacttagc ttttagagta cttagatacc ttaaaggtgc tcctggaaaa
      481 ggtattcaga ttgttaaagg taacgatttt aatcttaatg cttattgtga ctctgactcg
      541 ggtaagtgta aacttaatag aaaatctgtt actggatact tagtattttt ttgcaattct
      601 ttaacatctt ggaaaagtaa agaaaaacaa gcaacaattt ccagatcctc tgctaaagca
      661 gaatataggg ccatgggcac cgctgctagt gaaattgttt ggattaagaa tctcttactt
      721 ggtattcata ttgaattacc tgttaaacta cattgtcata acacttctgc tattcaaatt
      781 gctgcgaatc ccgtttatca tgaaagaaca aaacattttg agattgatat gcattttatc
      841 agagaaaaag tttctagtgg attgatcaaa actgttaaag ttgattcttc aaatcaactt
      901 gaagacattt taattaaagg gtcgggctct tatcaacaca atgtgttatc taatgccctg
      961 ggtttaaaag atttctcacg tggtggtttg tccctcttaa cgagaggtcg aaagcccgtg
     1021 agatgcaata gtgcacatcg cgttgcggag gcagttgggg agaggggttt taccgcccat
     1081 gtcctgggag atgaacgtgt gagtggttta gtcccctag
//
LOCUS       XM_071832424            2393 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842259), mRNA.
ACCESSION   XM_071832424
VERSION     XM_071832424.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2393
                     /gene="LOC139842259"
                     /note="uncharacterized LOC139842259; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     Proteins"
                     /db_xref="GeneID:139842259"
     CDS             1..1974
                     /gene="LOC139842259"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688525.1"
                     /db_xref="GeneID:139842259"
                     /translation="MDYSERSPSAQELLKRILELEERHAQIKPEISKRMLSAASHKQA
                     ISRQVYIKTHGGGFTEPLAMVLREHQYLNILQSLGQSVHIYDHNHRIFFWNHGAERIF
                     GYSAEEVHGRSPLDFIIEPKNAQAAIFVIERALHGESWSGVFPIKNKHGERFLIIVAN
                     TPFRDDNNRIIGAMALCSDSRLYQVKEVGMGITVPTTFTYIQHLKTSTPSEISNSVKL
                     KMETEDDYTDDEGGSDITDQSESNTRMGHISLSPFGVFFSMDTNDHLTRILYGDTTEN
                     KLGRIYKFLLTKVKALKGRKGISLPWKLSERNNESLDAKLGQEPEPEPGPNINSTPAK
                     QDHKLSVNKNMENDKFEATRLWISQLPISSGNGSFESNDIVKFERKPESLEYEILWED
                     LFIRAWIGEGSLGTVYQGLLYGLDVVVKLFKYQEFSDDITISFKHEISIMKRLRHPNV
                     LLIKGAVTSPPNLCIVTEFLPRGSLFQILHCNTIQLNWRRRFQMSVDIARGMNYLHSC
                     NPPIVHSDLKSSDILVDKNWSVKVGDCGLSRIKHQTYLKTKIWKGEPQWMAPEVLRNE
                     LADDKSDVYSYGVVLWELTTEKIPWDGLNVMQIVGTVGFSNQTLEIPKDVDPQWASLI
                     KSCWSREPQSRPCFQDILYKLKGFQKKFAAERK"
     misc_feature    175..>537
                     /gene="LOC139842259"
                     /note="PAS domain [Signal transduction mechanisms];
                     Region: PAS; COG2202"
                     /db_xref="CDD:441804"
     misc_feature    1195..1935
                     /gene="LOC139842259"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     Region: STKc_MAP3K-like; cd13999"
                     /db_xref="CDD:270901"
     misc_feature    order(1195..1209,1219..1221,1252..1254,1258..1260,
                     1351..1353,1399..1410,1420..1422,1426..1428,1546..1548,
                     1552..1554,1558..1563,1567..1569,1600..1602,1609..1611,
                     1657..1668)
                     /gene="LOC139842259"
                     /note="active site"
                     /db_xref="CDD:270901"
     misc_feature    order(1195..1209,1219..1221,1252..1254,1258..1260,
                     1351..1353,1399..1410,1420..1422,1546..1548,1552..1554,
                     1558..1563,1567..1569,1600..1602)
                     /gene="LOC139842259"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1207..1209,1420..1422,1426..1428,1546..1548,
                     1552..1554,1558..1560,1609..1611,1657..1668)
                     /gene="LOC139842259"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270901"
     misc_feature    order(1597..1623,1654..1668)
                     /gene="LOC139842259"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270901"
ORIGIN      
        1 atggactata gcgaaagatc gccatcagct caggagctct tgaaaaggat tctggaactc
       61 gaggaacgcc atgctcaaat caaaccagaa atatccaaac gcatgctctc ggccgctagt
      121 cacaaacaag caattagtag acaagtgtat ataaaaactc acggtggtgg attcacagag
      181 cctttagcta tggttttaag agaacatcag tatttaaata tactgcagtc attgggccag
      241 agtgtacata tatatgatca caatcatcgc atcttctttt ggaaccacgg tgcagaaaga
      301 atattcggtt attcagctga agaagttcac gggagatcac cacttgactt tataattgaa
      361 cctaaaaacg cccaggctgc catatttgtg atagaaaggg cgctgcatgg tgaaagttgg
      421 tcgggggtgt ttcctataaa gaacaagcat ggggaaaggt ttttgattat tgttgccaat
      481 acaccatttc gtgatgacaa taatagaata attggtgcga tggccttatg cagtgattca
      541 cgtctatatc aagtcaagga ggtagggatg ggcattactg tacccacgac gttcacttat
      601 attcaacatc tcaagacttc aaccccctct gagatatcga attcggtgaa gttgaaaatg
      661 gagacagaag atgactacac agatgatgaa ggtgggagtg acatcactga tcaaagtgaa
      721 tcaaacacta gaatgggaca tatctctcta tcaccatttg gtgtattctt ttctatggac
      781 acaaatgatc atttaaccag aatactttat ggtgacacaa ctgaaaacaa actaggaaga
      841 atctacaagt ttttgttaac aaaagtaaag gcattgaagg gtagaaaagg aatttcattg
      901 ccatggaaac taagtgaaag aaacaatgag tctcttgatg ctaaacttgg tcaagaaccc
      961 gaacccgaac ctggtccaaa tataaactca actcctgcaa aacaagacca taaactgtct
     1021 gtaaataaaa acatggaaaa tgataaattc gaggctacca gattgtggat ttctcagtta
     1081 cctattagta gtggcaatgg gagcttcgaa agtaacgaca ttgttaaatt tgaacggaag
     1141 ccagagagtt tggaatatga aattttgtgg gaagacttgt ttattagagc atggattggg
     1201 gaaggttcac ttgggactgt atatcaagga ttgctatacg gattggatgt tgtagtcaag
     1261 ctatttaagt atcaggagtt ttcagatgat ataacgattt catttaaaca tgagatatct
     1321 atcatgaaaa ggcttcgaca tccaaacgtt ttgctgatca agggtgctgt aacctcacct
     1381 ccaaatctat gcatcgtcac tgagttcctt ccccgtggaa gtttgtttca gatacttcac
     1441 tgtaatacga ttcaattaaa ttggagacgc cgctttcaga tgagtgtgga tattgcacga
     1501 ggcatgaatt atcttcatag ttgcaacccg cccattgttc atagtgatct gaagtcttca
     1561 gatattcttg tggataaaaa ctggtctgtg aaggttggcg actgtggtct ctcccgaatc
     1621 aagcatcaaa catacctgaa aacaaagatt tggaaaggag agcctcaatg gatggctcct
     1681 gaagttctgc gaaatgaact agcagatgac aagtcggatg tatatagcta cggtgttgta
     1741 ttgtgggaac ttactacaga aaagatcccg tgggatggtc ttaacgtgat gcagattgtc
     1801 ggaaccgtgg ggtttagtaa tcaaacacta gagataccga aagatgtgga tccacaatgg
     1861 gcttcgctta ttaaaagctg ttggagtaga gagccacaat ctcggccgtg tttccaagac
     1921 atactatata agcttaaagg tttccaaaag aagtttgcag ctgaaagaaa gtaggagatg
     1981 atgagcagga gagaaccgta tttaaaacat atgtttgtag tttgcaatct tggttttata
     2041 gatttaatac ctttttggct tgtttggaat gatcactaat gttatcctat gtgcattagt
     2101 tgttaaaaat ttcaagaaca tacacatatt atatttgcgt atattattat taggggcaaa
     2161 tggcccgaaa gagtaaccta tgttgtcaaa tttgacaatc aaaataaccc ccaatttcag
     2221 taagcccaaa aaggactcaa ttttaatttt cgctcgcaaa aaggactgcg tgttcaaatt
     2281 ttttaaaatt gaggtaatat caaacgattt ttttttaaaa aacgcgaatt acttcaaatt
     2341 aaaacttgga acagattcct aatgctccaa atttcatttt ttgtgaagca act
//
LOCUS       XM_071832425            1071 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable pectinesterase 67
            (LOC139842260), mRNA.
ACCESSION   XM_071832425
VERSION     XM_071832425.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1071
                     /gene="LOC139842260"
                     /note="probable pectinesterase 67; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842260"
     CDS             1..1071
                     /gene="LOC139842260"
                     /codon_start=1
                     /product="probable pectinesterase 67"
                     /protein_id="XP_071688526.1"
                     /db_xref="GeneID:139842260"
                     /translation="MFPLQSNVLKMISVVHVFTFITPTLFLNGVNGRSIITLKPQQGV
                     DASVLNSKVAPRKTITVDVNGSEKFKSIQDAIDSIPSGNQEWVVIQVKKGIYREKVTI
                     PREKGHIMLLGSGRTKTAIVWSQSSENNYESSTFKVEASHFIAFGISFKNDAPTGIAN
                     TSHNQSVAAYVGGDKVAFYSCGFYSSHNTLLDNKGRHYYDRCYFQGAIDVIFGRARSI
                     FHECEIFVIADKRVEIGGSVTAHIRTSINENTGFVFTNGRVYGIGHSYLGRPNGDHSR
                     VVFANTYMSKAVRTEGWSDWNHHGSFENLYHAEYNCYGPGSSTNGRARWLKKLSDQEA
                     APFLSTDFIDGKKWLIAGQSST"
     misc_feature    112..1053
                     /gene="LOC139842260"
                     /note="Region: Pectinesterase; cl29893"
                     /db_xref="CDD:421944"
ORIGIN      
        1 atgtttccat tgcaatcaaa tgttttaaag atgattagtg tcgtacacgt gttcacattt
       61 atcacgccaa cattattttt gaatggtgtc aatggtagaa gtatcatcac cttaaagcca
      121 caacaaggtg tagatgcatc ggttcttaat tcaaaagttg caccaagaaa aactatcact
      181 gtggatgtca atgggtcaga aaaatttaag tcaatacaag atgccattga ttcaattcct
      241 agcgggaatc aagaatgggt cgtcatacag gtgaaaaagg gaatttacag ggaaaaggtt
      301 acaattccaa gagaaaaggg tcacattatg ttgctaggaa gtgggaggac taaaacagca
      361 attgtttggt cacaaagctc tgaaaataac tatgaatctt ccactttcaa agttgaagca
      421 tcccatttta ttgcctttgg tataagcttc aagaatgatg cgcctacagg gatcgctaat
      481 acctcacata atcagtctgt agcagcatat gttggtggtg acaaagttgc attctatagt
      541 tgtggatttt atagttctca taacactctt cttgataata aaggtagaca ttactacgat
      601 cgatgttact ttcaaggtgc tatcgatgtc atttttggtc gtgctcgttc catctttcat
      661 gaatgtgaga tatttgtgat tgcggataaa cgagtagaga ttggagggtc ggttacagct
      721 catatacgaa cgagtataaa tgaaaataca ggatttgttt tcactaatgg aagagtttat
      781 ggtatcgggc attcttattt aggacgacca aatggtgacc attcgagagt agttttcgca
      841 aacacgtata tgtctaaagc tgtaaggact gaaggatgga gtgactggaa ccatcatgga
      901 agttttgaga acctatacca cgctgagtat aattgctatg ggccggggtc cagtacgaat
      961 gggcgggctc gatggttgaa gaaacttagc gatcaagaag ctgcaccatt tttgtcgaca
     1021 gattttatcg atggcaagaa atggttaata gcagggcaat cttcaacatg a
//
LOCUS       XM_071832426             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842261), mRNA.
ACCESSION   XM_071832426
VERSION     XM_071832426.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139842261"
                     /note="uncharacterized LOC139842261; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842261"
     CDS             1..555
                     /gene="LOC139842261"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688527.1"
                     /db_xref="GeneID:139842261"
                     /translation="MNACHILLGHPWQFDRKIKHDGFTNTYSFCKDSLNITLALLDTR
                     RKNDGEPNLFLSRSLFTKEIKNTPLLFAIVVAECNEEGNDIPIAVQPILSDFSGVLPD
                     EFLTGLPLMRDIQHCIDFVPSLSIPNKPTYRLNPNEFEELQRQVSELLAKGLIRESMS
                     AMRYPHYSYRNREDLFKCALTVGR"
ORIGIN      
        1 atgaatgcat gtcatatctt gttaggccac ccatggcagt ttgataggaa gataaaacac
       61 gatgggttta caaacacata tagtttttgc aaagatagtc ttaatatcac ccttgccttg
      121 ttggacacac gccgcaaaaa tgatggtgaa ccgaatctgt ttctcagtcg ctctttattc
      181 actaaagaaa tcaaaaacac ccctcttctg tttgcaattg tggtagctga atgtaatgag
      241 gagggtaatg atattccaat agcggttcaa ccgattctgt ctgatttttc aggcgtatta
      301 cctgatgagt tcctaacggg actaccatta atgcgtgaca tccagcattg tattgatttt
      361 gtacccagtt tatcaatacc taacaaaccc acttataggt tgaacccaaa cgaattcgaa
      421 gaactacaaa ggcaggtttc agagttgttg gccaagggtt taatccggga gagcatgagc
      481 gcgatgcggt acccgcacta ctcatacaga aacagggagg atcttttcaa atgtgcattg
      541 acagtagggc ggtga
//
LOCUS       XM_071832427             879 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ferritin-like catalase Nec2
            (LOC139842262), mRNA.
ACCESSION   XM_071832427
VERSION     XM_071832427.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..879
                     /gene="LOC139842262"
                     /note="ferritin-like catalase Nec2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842262"
     CDS             1..879
                     /gene="LOC139842262"
                     /codon_start=1
                     /product="ferritin-like catalase Nec2"
                     /protein_id="XP_071688528.1"
                     /db_xref="GeneID:139842262"
                     /translation="MGQDYDPITPYSRSNVPKADKNILEFALNLEYLEAEFFLYGSTG
                     KGLDHIQPGLAGGGPPPMGARMARLTPLLRNIITQFAFQEVGHLRAIKGKIGGGIPRP
                     LMDLSSKSFAITISKAFGRPLIPPFDPYANDINYMLASYMIPYVGLTGYVGANPKLQS
                     STAKQLVAGLLGVESGQDAVLRTLLYNRGAEKVAPYGITVAEFTDRISGLRNKLGHAG
                     LKDKGLIVPVTLGVEGKMPGNLLIADTDSLSYGRKPPEILRIVYGSGKEQVPGGFFPS
                     GANGTIAKKYLKSSKY"
     misc_feature    58..558
                     /gene="LOC139842262"
                     /note="Ferritin-like domain; Region: Ferritin_2;
                     pfam13668"
                     /db_xref="CDD:433392"
ORIGIN      
        1 atgggacagg actacgaccc catcacccca tattcaagat ccaacgtgcc taaagccgat
       61 aaaaatattt tggagtttgc tttaaactta gaatacttag aagcagagtt ctttttgtat
      121 ggatcaacgg gtaagggttt ggatcacatc caaccaggtc tagcaggtgg tggaccacca
      181 cccatgggtg cacgcatggc tcgtctaact ccattactta gaaatataat cacccaattt
      241 gcttttcaag aagttggtca cctcagagcg ataaaaggca agataggtgg tgggattccg
      301 aggccgttaa tggatctaag ttcaaaatca ttcgcaataa caataagcaa agcatttgga
      361 aggcccttaa ttccaccttt tgatccgtac gcaaacgata tcaattatat gcttgcttcc
      421 tacatgatcc cttacgttgg tcttaccggc tacgttggtg ctaatcctaa actacaaagt
      481 tctaccgcta aacagcttgt tgcaggtctt ttgggcgtag agtcaggaca agatgcggtt
      541 cttagaacac ttttgtacaa ccgaggggca gaaaaagtag ccccgtacgg tatcacagta
      601 gctgaattca ctgacagaat atcggggtta cgtaataagt tgggtcatgc tggtttaaaa
      661 gacaaaggct taattgtccc ggttacccta ggagttgaag gcaagatgcc cggaaatctt
      721 ttaattgccg atacagactc gttatcgtac ggtcgaaaac cgccagagat acttcgtatt
      781 gtgtatggaa gtgggaaaga acaggttccc ggtggatttt ttccttctgg tgctaacggg
      841 acaatcgcta agaaatactt gaagtccagt aaatattaa
//
LOCUS       XM_071832428             459 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842263), mRNA.
ACCESSION   XM_071832428
VERSION     XM_071832428.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..459
                     /gene="LOC139842263"
                     /note="uncharacterized LOC139842263; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842263"
     CDS             1..459
                     /gene="LOC139842263"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688529.1"
                     /db_xref="GeneID:139842263"
                     /translation="MTPYEMLYGRRCRTSSCWLEAGEKQFGSPEIVQQTAKKVAIARE
                     KLKVARDRQKMYADPHRRLVTFAEGERVYLKLSPWKGVICFGKRGKLAPIYIGPFHIR
                     QVLNDQIVVLDLPTELVGIYNTFNVCYLRKCKVDNEIQILPLQDLKVDSS"
ORIGIN      
        1 atgacgccct acgaaatgtt atatggtaga cggtgtagaa cttcatcgtg ttggttagaa
       61 gctggtgaga agcagtttgg aagtcctgag attgtgcaac aaacagcaaa aaaagtggca
      121 atagcacgtg aaaagttaaa agttgctaga gatagacaaa agatgtatgc ggatcctcat
      181 cgacgactag tgacgtttgc cgaaggtgag cgtgtatatt tgaaactgtc tccatggaag
      241 ggtgtaattt gctttggtaa gagaggaaag ttagcaccaa tatatattgg tccgtttcat
      301 atcagacaag ttttaaatga tcagatagtg gtcttagatc ttccaacaga actggtgggt
      361 atttataata cgtttaacgt gtgttatctc cgcaagtgca aagtggataa tgaaattcag
      421 attttacctc ttcaggattt gaaagtagat tcaagttag
//
LOCUS       XM_071832429            1425 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842265), mRNA.
ACCESSION   XM_071832429
VERSION     XM_071832429.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1425
                     /gene="LOC139842265"
                     /note="uncharacterized LOC139842265; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842265"
     CDS             1..1425
                     /gene="LOC139842265"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688530.1"
                     /db_xref="GeneID:139842265"
                     /translation="MSGSDRKWMYNMTDSSNFLSLNYILKVDMFLDFAYSNDKIVETN
                     VRPMGEIVLQIKCPCTICKNNHYKPRDVVKEHLLTKGFIRNYTRWVKHGEIEIPDAGE
                     PSTPMEVDVDVDHDDGMRQMVWENIQAAGFQSNLELNLNEEHVPNARAKRFYDMLEND
                     KEPLYRGCEEWSTLQAATTLLNWKSTCNVPESTFNHILPIFKSMLPVGNKLPSNLYET
                     KAILKELSLPKKRYDACKNHCMLFYKPEDLALTHCRYCNEPRYKFNKVPHLVLTYMPI
                     GERLKRLYMSEKTAKDMMWHSDHNTKEGSMSHPSDGEAWKHFDETHPFFADEIRNVRL
                     GLCTDGFSPNNSNSNPYSLWPVFLTIYNLPPWMCVKDSYIQLSLVIPGRKSPGQNLDV
                     FLQPLIDELKELWDDGIEVYDAYRKQNFTMRAILLWTVSDFPTYAMLSGWSTHGRLAC
                     PYCMGDTNAFRLTEGGKPCWFDCH"
     misc_feature    16..282
                     /gene="LOC139842265"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    907..>1410
                     /gene="LOC139842265"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atgtcgggta gtgatagaaa atggatgtat aatatgactg atagcagcaa ttttctttct
       61 ttaaattata ttctcaaagt cgacatgttc ttggactttg cctattctaa tgataaaatt
      121 gttgaaacca acgtaagacc gatgggagaa atagttcttc aaattaaatg tccgtgtact
      181 atttgcaaaa ataatcacta taagccaaga gatgttgtta aggaacactt gcttactaaa
      241 gggttcattc gtaactacac aagatgggtt aaacatggtg aaatagaaat cccagatgca
      301 ggagaacctt ctactccaat ggaagttgat gttgatgttg atcatgacga tggtatgaga
      361 caaatggtgt gggagaacat acaagctgct ggttttcaat caaatctaga attaaatttg
      421 aacgaagaac atgtaccaaa tgcaagagca aagagattct atgacatgtt agaaaatgac
      481 aaggaacctt tatatagagg atgtgaagaa tggtcaacat tacaagctgc cacgactttg
      541 ttgaattgga aatcaacttg caatgtaccc gagtctacct ttaaccacat acttcctatt
      601 tttaaaagta tgttacctgt tggtaataag ctaccgtcaa acttgtatga gactaaagca
      661 atactgaagg aactcagtct tccgaaaaag aggtacgatg cttgcaaaaa ccattgcatg
      721 ttattctata aaccagaaga tttggcgtta acccactgcc gatactgcaa tgaacctcgt
      781 tataaattta ataaggtccc tcatttagta ttgacgtaca tgccaattgg ggagagactt
      841 aagaggttat atatgtcaga aaagacggct aaagacatga tgtggcactc cgatcacaat
      901 acaaaggagg gtagcatgtc acatccaagt gatggtgagg cgtggaaaca ttttgatgaa
      961 actcatccat tctttgcaga tgagattcga aatgtccggc ttgggttgtg cactgatggt
     1021 tttagcccta acaactcaaa ttctaatcct tattcattat ggcccgtgtt cctcacaatt
     1081 tataacttac ctccttggat gtgcgtgaaa gactcgtaca ttcaactatc tttggttatt
     1141 cctggaagaa agagtcccgg ccaaaactta gatgtctttc ttcaaccatt aatagatgag
     1201 ctgaaagagt tgtgggatga tggtattgaa gtatatgatg cttatcgtaa acaaaatttt
     1261 actatgagag ctatcctttt gtggacagtc agtgactttc caacttatgc aatgctctcg
     1321 ggttggagca cacatggtag attggcttgt ccttattgca tgggtgacac aaatgcattt
     1381 cggttaactg agggagggaa gccatgttgg ttcgattgcc attga
//
LOCUS       XM_071832430            2250 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pentatricopeptide
            repeat-containing protein At1g69350, mitochondrial (LOC139842266),
            mRNA.
ACCESSION   XM_071832430
VERSION     XM_071832430.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2250
                     /gene="LOC139842266"
                     /note="putative pentatricopeptide repeat-containing
                     protein At1g69350, mitochondrial; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842266"
     CDS             1..2250
                     /gene="LOC139842266"
                     /codon_start=1
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g69350, mitochondrial"
                     /protein_id="XP_071688531.1"
                     /db_xref="GeneID:139842266"
                     /translation="MTQYMPLFRSCSTIRTLTQLHAHLFITGQHTSQLASTKLIESYA
                     QMNSLHSANLVFQSFHTPDSFMYGVLIKHYVWYGLYKQALTLYSNMLHKLTIVSSFIF
                     PSVLRACSGFHDLGLGKNVHGRIIKHGFESDRVIRTSLLSMYGEVSDMVDARKVFDEM
                     PERDVVSWSCVISMYVRNGKAGDGLKLFCEMMRDGYEPDYVTLLSVAEACGELGLRIQ
                     SKSIHGYIVTNDIESGDLSTLNNSLIAMYGKCGELYNAKRLFNRVSNHCTSSWTAMIT
                     CYNHNGYYLEALNRFNKMLESKTEPNEITMMVIICSCARLCFLREGKSIHGFVIRKNL
                     DPDNDILGPTLIDLYANCGKLKTCHKIIDISVDEHVISWNMLISGYTREGNSEEALNL
                     FKRMRIQRLSPDEFTITSVVSACGNTGFVNLGTQIHCYVIKAGALNEFVLNSLIDMYA
                     KFGYVDLAYSIFDKQHHKSVVTWNSMMWGFCNNGESIEALNLFNEMYLDGVEMDDVSF
                     LSAIRACSDLRDLVKGKWIHHKLITSNMMNDTYVLTALLDMYAKCGELQMARCVFEVM
                     PYKSVVSWSAMIDAYGMHGLVDMAILVYDMMIESDTKPNEITFMNILSACSHAGYVEK
                     GKYYFDSMKKDFGIEPKLEHFSCLIDLLSRAGHLDDAYSIANSIPFPPNSGIWGSLLS
                     GCRIHRRLDMIELIQEKIEKINDTGYYTLLSNISAEEADWEQFQTVRSMMKANGLKKL
                     QGSSMVRSG"
     misc_feature    196..279
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    232..2238
                     /gene="LOC139842266"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    301..384
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    412..489
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    493..582
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    706..786
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    808..891
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    907..996
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1114..1197
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1213..1392
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1408..1488
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1513..1602
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1624..1707
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1717..1800
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1816..1905
                     /gene="LOC139842266"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgacacaat acatgccttt atttcgatcg tgttctacca taagaacact aacacaactt
       61 catgctcatc tctttatcac aggccaacat acaagccaac ttgcttcaac caaactcatc
      121 gaatcatacg cacaaatgaa ctctttacat tccgcaaacc ttgtatttca atccttccat
      181 acaccagatt cctttatgta cggcgtacta atcaaacact acgtttggta cggtttatat
      241 aaacaagctc ttactttata ctcaaacatg ttacataaac taaccatcgt tagcagcttc
      301 atattcccgt ctgttttacg agcttgttcc ggttttcatg atctgggtct tggaaaaaac
      361 gttcatggga ggataattaa acatgggttt gagtcggatc gtgtgatccg gacgtcgttg
      421 cttagtatgt atggtgaagt gtcggacatg gttgacgcac gtaaagtgtt tgatgaaatg
      481 cctgaacgag atgtcgtgtc ttggagttgt gtgatttcga tgtatgtgcg taatgggaag
      541 gctggtgatg ggttgaaatt gttttgtgaa atgatgagag atgggtacga accagattac
      601 gtgactttgc ttagcgtagc tgaagcatgt ggtgagttag gtttaaggat acaatcaaag
      661 tcgattcatg ggtatattgt gacaaacgat atcgagagtg gtgatcttag cacgctaaat
      721 aactctctta ttgctatgta tggaaaatgt ggtgaattat acaatgctaa gaggcttttc
      781 aaccgtgttt ctaatcattg tacatcatca tggaccgcta tgatcacatg ttataatcac
      841 aatggttact atttagaagc gttaaaccgt tttaacaaga tgcttgaatc gaaaacggaa
      901 ccaaatgaaa tcactatgat ggtgattatc tgttcttgtg ctagactatg ttttctaaga
      961 gaaggtaaat caatccatgg tttcgttata aggaaaaacc tcgaccctga taatgatatc
     1021 ttggggccca cattgatcga tttgtatgct aattgtggaa agttgaaaac ttgtcacaag
     1081 attatcgata tatccgtgga tgaacatgtt atttcatgga atatgctcat atcgggttat
     1141 actcgagagg gaaattccga agaagcgtta aatctattta aacgaatgag aatacaaagg
     1201 ttatcaccag acgaatttac tatcacaagt gttgtgtcag cttgtggtaa cacaggtttc
     1261 gtgaatcttg gaactcagat tcattgttat gttattaaag caggtgcttt aaacgagttc
     1321 gttttgaatt cattaatcga catgtatgct aaatttggtt atgtggattt agcatatagt
     1381 atattcgata agcagcatca taagagtgtt gtaacatgga attcgatgat gtggggtttt
     1441 tgtaataacg gtgaatccat cgaagccctg aatcttttca acgaaatgta tttggatggt
     1501 gtagaaatgg acgatgtaag tttcttgagt gcgattcgag catgttcaga tttaagagat
     1561 ttagtaaagg gaaaatggat tcatcataag cttattacaa gtaatatgat gaatgataca
     1621 tatgtactaa cagctttact agatatgtat gcaaaatgtg gcgaattaca aatggctcga
     1681 tgcgtttttg aagtgatgcc gtacaaaagt gttgtgtcat ggagtgcaat gattgatgct
     1741 tatgggatgc atggtttggt tgatatggct atattggttt atgatatgat gattgaatct
     1801 gatacaaaac ctaatgaaat tacctttatg aacattttat ctgcttgtag tcatgctgga
     1861 tatgtcgaaa agggcaagta ttatttcgac tctatgaaga aagattttgg gattgaacca
     1921 aaattagaac acttttcttg tttaatcgat ctattgagtc gagctggtca tcttgatgat
     1981 gcgtacagta tcgctaattc tataccgttt ccacccaatt ctgggatttg gggttcgttg
     2041 ttaagtggtt gtcgaattca tagaagactc gatatgatcg aattgattca agaaaaaata
     2101 gaaaagatta atgacacagg atattatact ttgttgtcta atatatcagc tgaagaagca
     2161 gattgggaac aatttcagac tgtgagatca atgatgaaag ctaatggtct caaaaaactt
     2221 caaggatcaa gtatggttcg aagcggatga
//
LOCUS       XM_071832431            2025 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At2g03380, mitochondrial-like
            (LOC139842268), mRNA.
ACCESSION   XM_071832431
VERSION     XM_071832431.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2025
                     /gene="LOC139842268"
                     /note="pentatricopeptide repeat-containing protein
                     At2g03380, mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842268"
     CDS             1..2025
                     /gene="LOC139842268"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At2g03380, mitochondrial-like"
                     /protein_id="XP_071688532.1"
                     /db_xref="GeneID:139842268"
                     /translation="MIHYRTLNSSTTHQTLDPTVAYVNSISSDPLYFLLGSCRNLISL
                     KELHSLLIVDGQLNQQSLQTKLVSIYGSFGDMKSARLVFDQMPHPNMFSYKVMIRWYF
                     INDLHFDIIGLYKSMSKSLYEYDNIVFSIVVKACTELRDIKEGKKVHCDIVKAGCRDG
                     FVLTSLVDMYAKCGDLICSQSVFDSIVDRDVVSWTSMIVAYVQNGCAGEALALFNRMR
                     SGLVEGNQHTLGSVVSACTKLRALHQGKWVHGYIIKNGVDLNSHIVSSLVDMYVKCGS
                     ICDARSAFNELTSVDIVTWTTMIVGYSQNCYPHEAIALFTDKKYFYIMPNSVTISSVI
                     SACAQMGSLKLGRGIHCHEIKLGLEDGNLINALIDMYAKCEMIKDARYLFESFSNKDL
                     VTWNSIINGYAQIGSTYEVTRLFHRMRSEGFHPDEFTIVTLLSCFVYDLLIGSSLHAY
                     AIKRSLSRDNNVYVNTALMHFYAKCGDLKTARRVFDGMGEKNTISWNVLIDAYGMQGD
                     SNGSIAVFNDMVRANLDPTDATFIALLSSCSHTGAIEGCKFFNLMCQEFGFVPNMKHY
                     SCLVDLLARSGRLEEAFAFIKDMPVQPNASLLGSFLHGCSLHSRFDLGQLAVNWILNQ
                     HPIDASYYVLVSNLYASDARWSQVLHVRELMKVKDLSKLPGCGYLYSTTA"
     misc_feature    184..2007
                     /gene="LOC139842268"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    190..261
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    271..360
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    382..465
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    478..567
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    577..660
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    676..765
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    781..861
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    880..963
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1093..1170
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1180..1263
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1279..1473
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1483..1566
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1582..1671
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1687..1767
                     /gene="LOC139842268"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgattcatt acagaaccct aaattcatca acaactcatc aaactcttga ccccaccgta
       61 gcttacgtca attcaatctc atcagaccca ctatatttcc tattgggttc atgcagaaac
      121 ttgatatcac tcaaggagtt acattctttg cttatagtag atggccaatt aaaccaacaa
      181 agtttgcaaa cgaaacttgt aagtatatac ggatcgtttg gggacatgaa aagcgcacgc
      241 ttggtgttcg atcaaatgcc tcacccaaat atgttttcat ataaagtgat gattaggtgg
      301 tattttataa atgatctaca ttttgacatt attgggttgt acaagagtat gagcaaaagt
      361 ctatacgaat atgataacat cgtgttttcg attgtagtaa aggcgtgtac agaattgcga
      421 gatattaaag aagggaagaa agtgcattgc gatattgtga aggctggttg tcgggacggg
      481 tttgttttga ctagtcttgt agatatgtac gctaaatgtg gcgatcttat atgttcacaa
      541 agtgtttttg atagtattgt tgatagagat gttgtttctt ggacatcaat gatagttgcg
      601 tacgtgcaaa acggttgtgc tggtgaagca ttagcgttgt ttaatcgaat gagaagtgga
      661 ttagttgaag gaaatcaaca tacgttaggt agcgttgttt cagcttgcac aaagttacga
      721 gctttacatc aagggaagtg ggttcatggt tacattataa agaatggggt cgatctcaat
      781 tcacatatag ttagttcttt agtagacatg tatgttaaat gtggatctat atgtgatgct
      841 cgatctgctt ttaacgagct tactagtgtc gatatcgtca cttggacaac tatgattgtt
      901 gggtacagtc aaaattgtta cccacatgaa gcaattgcat tgttcactga taagaagtat
      961 ttttatatta tgcctaattc ggttactatt tcaagtgtga tatccgcttg tgcgcaaatg
     1021 ggaagtttaa aactaggtag aggtatacat tgtcatgaga ttaagctagg attagaagat
     1081 ggtaatctga taaacgcttt aatcgacatg tatgcaaaat gtgagatgat taaagatgcc
     1141 cgttacttat tcgagagctt ttcaaacaaa gatttggtta catggaattc aattattaac
     1201 gggtacgccc aaattggatc tacgtacgag gttacaagat tatttcatcg aatgagatcc
     1261 gaaggttttc acccggatga atttactata gtgactctgc tttcatgttt tgtttatgat
     1321 cttctaattg gttcttctct tcacgcgtat gccataaaaa gatcgctttc acgtgataat
     1381 aatgtatatg tcaacacagc acttatgcat ttttacgcca aatgtggtga tttgaaaacc
     1441 gctcgtcgtg tttttgatgg tatgggtgag aagaacacga tttcatggaa cgtgttaatc
     1501 gatgcttatg gtatgcaagg agatagtaat ggttctattg cagtttttaa tgacatggtc
     1561 agggcaaatt tggatcctac tgatgcaaca ttcatagcat tattatcttc ttgtagtcat
     1621 acaggagcaa ttgaaggatg caaattcttt aacttaatgt gtcaagaatt tggctttgtt
     1681 ccaaacatga aacactacag ttgtttggtt gacttgttgg ctcgttctgg caggctcgaa
     1741 gaagcatttg ctttcataaa agatatgccg gttcaaccaa acgcgagcct tttgggatca
     1801 tttctccatg ggtgcagttt gcactcgagg tttgaccttg gtcaactggc agttaattgg
     1861 attcttaacc agcatccaat tgatgcttcc tattatgttc tcgtgtcgaa tttatacgct
     1921 tcagatgcaa gatggagcca agttttgcat gtaagagagt taatgaaggt gaaagattta
     1981 tctaagttgc ctggatgtgg atacttgtac agtacaactg cataa
//
LOCUS       XM_071832432             753 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842269), mRNA.
ACCESSION   XM_071832432
VERSION     XM_071832432.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..753
                     /gene="LOC139842269"
                     /note="uncharacterized LOC139842269; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842269"
     CDS             1..753
                     /gene="LOC139842269"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688533.1"
                     /db_xref="GeneID:139842269"
                     /translation="MKAVPYPKALRKDKLVAQYKKFEDMIKNVMVTLPLIDMLKAQEP
                     KIPKKLGDPGKFVFPCKFGNSKTFDALADLGASINLMPLSLYEILDLRPLSPSRIRIK
                     AYNHSYDSAMGLAEYIGLPVEDLEVLMILGRPFLATADTIILCQRNQLNIGVGNDRIT
                     INIREAMKQPSSTDDKDCYAIELVDEYVNEEFEKLLGVDTTGFNELGENGQFDLEADF
                     KELMNVDIESDEFVCEQKPDESYEAIPNEDRF"
     misc_feature    190..411
                     /gene="LOC139842269"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(217..219,223..225,229..231,301..309,388..390)
                     /gene="LOC139842269"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    217..225
                     /gene="LOC139842269"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    217..219
                     /gene="LOC139842269"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(301..312,328..339)
                     /gene="LOC139842269"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaaagcgg tcccgtaccc gaaagcttta aggaaggaca agttggtggc ccaatacaag
       61 aaatttgaag acatgataaa gaatgtgatg gtcacattgc ctctcatcga catgttaaag
      121 gcacaagaac caaaaatccc taagaaattg ggtgatcccg ggaagtttgt gttcccttgc
      181 aaattcggta attctaagac atttgatgcc ttagccgatt tgggagctag tataaatctc
      241 atgccccttt ccctttacga aatacttgac cttaggccat tgtcaccttc taggattcga
      301 attaaggcct ataaccattc ctatgactcc gctatgggat tagcagaata tatcgggtta
      361 ccagtggaag accttgaagt cctaatgatc ctaggaagac cattcttagc cacggccgat
      421 acaatcattc tatgccaacg caaccaattg aatattggtg ttggaaatga ccgtattaca
      481 atcaatattc gggaagctat gaagcaaccg agttcgaccg atgacaagga ttgctatgca
      541 attgaactag ttgatgaata tgttaatgaa gagttcgaaa aactcttagg cgttgacacc
      601 accgggttca acgaattagg agagaatggc caatttgacc ttgaggccga ttttaaggaa
      661 ttgatgaatg ttgacattga aagtgatgag tttgtttgtg agcaaaaacc ggatgagtct
      721 tatgaggcaa ttcccaatga ggatagattt tga
//
LOCUS       XM_071832434             345 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides metalloendoproteinase
            5-MMP-like (LOC139842273), mRNA.
ACCESSION   XM_071832434
VERSION     XM_071832434.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..345
                     /gene="LOC139842273"
                     /note="metalloendoproteinase 5-MMP-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842273"
     CDS             1..345
                     /gene="LOC139842273"
                     /codon_start=1
                     /product="metalloendoproteinase 5-MMP-like"
                     /protein_id="XP_071688535.1"
                     /db_xref="GeneID:139842273"
                     /translation="MAVKFSMLPFLFIFFVLVVGNDKKSSPFVFIKHLEGAEKGTKSQ
                     GLDNLRQYLARFGYLNYCFAPNDQENYFDEELEAALKRYQINVTGKLDGPTVSQMMKP
                     RCEVSDYQTHQV"
     misc_feature    142..297
                     /gene="LOC139842273"
                     /note="Putative peptidoglycan binding domain; Region:
                     PG_binding_1; pfam01471"
                     /db_xref="CDD:460223"
ORIGIN      
        1 atggcagtta aattttctat gttacccttt ttgttcatct tctttgttct tgttgttggc
       61 aatgacaaaa aatcctcacc ttttgtgttc atcaaacacc ttgaaggtgc tgaaaagggt
      121 accaaatctc aaggtctcga taatctcaga caatacttag cccgtttcgg atacctaaat
      181 tactgtttcg cacctaacga ccaagaaaac tattttgatg aagagctaga ggctgccctc
      241 aaacgttacc aaatcaacgt caccgggaaa ctagacgggc ctacagtttc acaaatgatg
      301 aagcctcgtt gcgaagtatc tgattatcaa acacatcaag tatga
//
LOCUS       XM_071832435            2325 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842274), mRNA.
ACCESSION   XM_071832435
VERSION     XM_071832435.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2325
                     /gene="LOC139842274"
                     /note="uncharacterized LOC139842274; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842274"
     CDS             1..2325
                     /gene="LOC139842274"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688536.1"
                     /db_xref="GeneID:139842274"
                     /translation="MYTLTIESHGASHQQWTFNDDILTCCSQLYINVVINLVGSLLRY
                     NCEVIPASKNSHKRYKFNGAKDPDFYSLFLTVMLTPNSQRVIFLKCNTGDELIIFWSC
                     LHIQTGVRVIFNTGVTIGSKSTCCYSFCLTSISQRFNLMLLDGVGMKVKTSRIKNGLN
                     KLVSLNQSAFVPGRAIQDNILITQELLKGYGRINGPKRCAMKIDIQKAYDTVSWSFLR
                     NILGKFGFHVKMIGWIMTCISTASFSVYVNGDINGFFKGGRGLRQGDPMSPYLFTLVM
                     EVLNLIIIKHVQMSKEFKYHYRCKLVKLTHICFADDLLMFCKGDVKSVEVIKKGLEEF
                     SAISGLFPNLHKSTIFFGSVDQGVKKAILNILPFNVGSLPMKYLGVPLIAKRLGVGDY
                     KHLVDKVNEKVHCWRNKWLSYAGRLQLITSVLASMQVYWASVYSIPQTVIKDIERLMK
                     DFLWDSSQSGKGKAKVAWKVICRPKSQGGLGLRPIKEWNDVLLMKQVWKIITKKVSIW
                     WQWVNLVKLKGVEFWDIGYQSNDSWGWRHMLRLRDIMKPHVHIDTNGEFWWRTSNNKL
                     KPYSSNLVWKDLRDNVAKVEWYHVVWYPQITPKHAFISWLAVQQRLLTQDRLMKWYPH
                     EVFKCNFCGKHEDSHSHLFFKCEFASQVWEKTKSLIVYKGLHNDLLSIVHDFAKYTAV
                     KDIINISNKIAIAAAVYFVWMERNRRQFMKLMKSVDEVFQDIREYIRVKLVSIKVRST
                     SNVHQIASLCDLVIVGNSLQLMQVYCILLYAAFG"
     misc_feature    445..1146
                     /gene="LOC139842274"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(610..627,787..792,925..927,931..936,1132..1137)
                     /gene="LOC139842274"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(610..627,787..789,931..933)
                     /gene="LOC139842274"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    790..792
                     /gene="LOC139842274"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    1705..1956
                     /gene="LOC139842274"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtatactc tgactattga aagtcatggt gcaagtcacc aacaatggac ctttaatgat
       61 gatattttga catgttgcag tcaactttat attaatgtgg ttatcaatct tgttggtagt
      121 ttgttaaggt ataattgtga ggtgatccca gcttctaaaa acagtcacaa gaggtacaag
      181 ttcaatggtg caaaggatcc tgatttttac tctctatttt tgactgttat gttgactcca
      241 aatagtcaac gggttatttt cttgaagtgt aatactggtg atgagcttat tatattctgg
      301 agttgccttc atatccaaac tggagttcgg gtcattttta atacgggtgt taccattggg
      361 tcaaagtcta catgctgcta ttctttttgt ttgacttcaa taagtcaaag gtttaatctt
      421 atgctactag atggtgtggg tatgaaagta aagacctcaa ggattaaaaa tgggctgaat
      481 aaactggtga gcttgaatca aagtgctttt gttcctggaa gagcaattca agataatatt
      541 cttattactc aagaactttt gaagggttat ggtagaatca atgggcctaa gaggtgtgca
      601 atgaaaatag acattcaaaa ggcttatgat actgtaagtt ggagcttctt gaggaatatc
      661 ttaggcaaat ttggtttcca tgtaaaaatg attggttgga taatgacttg tatatccact
      721 gcatcatttt ctgtttatgt gaatggtgat ataaatggtt tttttaaagg gggtagaggg
      781 ttgaggcaag gagatcccat gtcaccatat ttgttcactt tggtaatgga ggtgttgaat
      841 ctgataatta taaaacatgt acagatgtca aaggagttca aatatcacta taggtgtaag
      901 ttggttaagt tgactcatat ctgctttgca gatgatctgt taatgttctg taaaggggat
      961 gtgaagtctg ttgaggttat caagaaaggg cttgaggagt ttagtgctat ctctggttta
     1021 tttccaaatt tacacaaaag cacaatattt tttggcagtg ttgatcaggg tgtcaaaaaa
     1081 gctattttga atattcttcc atttaatgtg gggagccttc ctatgaaata tttaggggtt
     1141 ccactgattg ctaaaagatt gggggttggt gactacaaac acttggttga taaagtcaat
     1201 gaaaaggttc attgctggag gaataaatgg ctttcatatg caggaaggct tcaattgatt
     1261 acatctgtgc tggcatcaat gcaagtatat tgggcatcag tatactctat acctcagact
     1321 gttatcaaag atattgaaag gttgatgaag gatttcctat gggacagcag tcaatcgggt
     1381 aaaggtaaag caaaggttgc atggaaggtt atttgcaggc ctaaatctca aggtggtttg
     1441 ggtttaagac caattaagga gtggaatgat gtattactta tgaaacaagt ctggaagatc
     1501 attactaaaa aagtttcaat ctggtggcaa tgggttaatt tggtgaagtt aaaaggggtt
     1561 gaattttggg atatagggta tcagtcaaat gatagttggg gttggagaca tatgttaaga
     1621 ttaagggata ttatgaagcc tcatgttcat attgatacta atggtgaatt ctggtggaga
     1681 actagtaaca ataaactgaa gccttactct tctaacctag tgtggaaaga tctaagggac
     1741 aatgttgcta aggtggaatg gtatcatgtt gtatggtacc cacaaatcac cccaaaacat
     1801 gcctttataa gttggttagc tgtgcaacag agactgctta cccaagacag gcttatgaaa
     1861 tggtatcctc atgaggtatt caagtgtaat ttctgtggta aacatgaaga ttctcattca
     1921 cacttgtttt ttaaatgtga atttgcaagt caagtttggg aaaaaacaaa gagcttgatt
     1981 gtgtataaag gactgcacaa tgatctattg agtattgttc atgattttgc taagtacact
     2041 gcagttaagg acatcataaa tatttcaaat aaaattgcaa ttgcagcagc tgtttatttt
     2101 gtgtggatgg aaaggaatag aagacagttt atgaagctga tgaaatctgt tgatgaagtg
     2161 tttcaggata tcagagaata tattcgagtt aaattggtga gcattaaggt tagaagtact
     2221 tcaaatgttc atcagatagc aagtctttgt gatttggtaa ttgtaggcaa tagtcttcaa
     2281 ttgatgcaag tgtattgtat tttgctgtat gctgcctttg ggtag
//
LOCUS       XM_071832436             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pentatricopeptide
            repeat-containing protein At1g69350, mitochondrial (LOC139842275),
            mRNA.
ACCESSION   XM_071832436
VERSION     XM_071832436.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139842275"
                     /note="putative pentatricopeptide repeat-containing
                     protein At1g69350, mitochondrial; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 27
                     Proteins"
                     /db_xref="GeneID:139842275"
     CDS             1..783
                     /gene="LOC139842275"
                     /codon_start=1
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g69350, mitochondrial"
                     /protein_id="XP_071688537.1"
                     /db_xref="GeneID:139842275"
                     /translation="MNLGTQIHCYVIRSGVLNEFVLNSLIDMYAKFGYVDLAYSIFDK
                     QHRKSVVTWNSMMWGFCNNGESIEALNLFNEMCLNGEEMDNVSFLSAIRACSDLRDLV
                     KGKWIHHKLITSNMMNDTYVPTALLDMYAKCGELQMARSVFEVMSYKSVVSWSAMIDA
                     YGMHGLVDDAILVYDMMIESNTKPNEITFMNILSACSHAGYVEKGKYYFDSMKKDFGI
                     EPKLEHFSCLIDLLSRAGHLDDAYSIANSIPFPPNSGIWGSF"
     misc_feature    <10..>777
                     /gene="LOC139842275"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional; Region: PLN03081"
                     /db_xref="CDD:215563"
     misc_feature    61..144
                     /gene="LOC139842275"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    154..237
                     /gene="LOC139842275"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    358..447
                     /gene="LOC139842275"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    457..540
                     /gene="LOC139842275"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    556..645
                     /gene="LOC139842275"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgaatcttg gaactcagat tcattgttat gttattagat caggtgtttt aaacgagttc
       61 gttttgaatt cattaatcga catgtatgct aagtttggtt atgtggattt agcgtatagt
      121 atattcgata agcagcatcg taagagtgtt gtaacatgga attcgatgat gtggggtttt
      181 tgtaataatg gtgaatccat cgaggcgtta aatcttttca acgaaatgtg tttaaatggt
      241 gaagaaatgg acaatgtaag tttcttgagt gcgattcgag cgtgttcaga tttaagagat
      301 ttagtaaagg gaaaatggat tcatcataag cttattacaa gtaatatgat gaatgataca
      361 tatgtaccaa cagctttact tgatatgtat gcaaaatgtg gcgaattaca aatggctcga
      421 agcgtttttg aagtgatgtc atacaaaagt gttgtgtcat ggagtgcaat gattgatgct
      481 tatgggatgc atggtttggt tgatgatgct atattggttt atgatatgat gattgaatct
      541 aatacaaaac ctaatgaaat tacatttatg aacattttat ctgcttgtag tcatgcagga
      601 tatgttgaaa agggtaagta ttatttcgac tcgatgaaga aagattttgg gattgaaccg
      661 aaattagaac acttttcttg tttaatcgat cttttgagcc gagcgggcca tcttgatgat
      721 gcgtatagta tcgctaattc tataccgttt ccacccaatt ctgggatttg gggttctttc
      781 tga
//
LOCUS       XM_071832437            2278 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein At2g03380, mitochondrial-like
            (LOC139842276), mRNA.
ACCESSION   XM_071832437
VERSION     XM_071832437.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2278
                     /gene="LOC139842276"
                     /note="pentatricopeptide repeat-containing protein
                     At2g03380, mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842276"
     CDS             1..2049
                     /gene="LOC139842276"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At2g03380, mitochondrial-like"
                     /protein_id="XP_071688538.1"
                     /db_xref="GeneID:139842276"
                     /translation="MIYYRTLNSLTNHQTLDPTVAYFNSISSDPLYFLLGSCRNLNSL
                     KELHSLLIVEGQSNQQSLQTKLVSIYGSFGDMKSARLVFDQMPHPNMFSYKVMIRWYF
                     INDLHFDTLRFYKSMSKSLDEYDNIVFSIVVKACTELRDINEGKKVHCDIVKAGCRDG
                     FVLTSLVDMYAKCGDLICSQSVFDSIVDRDVVSWTSMIVAYVQNGCAGEALALFNRMR
                     SGLVEGNQHTLGSVVSACTKLRALHQGKWVHGYIIKNGVDLNSHIVSSLVDMYVKCGS
                     ICDARSAFNELTSVDLVTWTTMIVGYSQNCYPHEAIALFTNKKYFYIMPNSVTISSVI
                     SACAQMGSLKLGKGIHCHEIKLGLEDGNVINALIDMYAKCEMIKDARYLFESFSNKDL
                     VTWNSIINGYAQIGSTYEVTRLFHRMRSEGFRPDEYTIVTLLSCFVSVGDLQIGSSLH
                     AYSTKRSLSSDNNVYINTALMHFYAKCGELKIARRVFDGMGEKNTISWNVLIDAYGMQ
                     GDCNGSISVFNDMVKANLDPNDTTFIALLSSCSHTGAIEGCKFFNLMRQEFGFVPNMK
                     HYTCLVDLLSRSGRLEEAFSFIKDMPVQPDVTLLGSFLHGCSLHSRFDLGQLAVSWIF
                     NQHPNDASYYVLVSNLYASDGRWSQVSYIRELMKVKDLCKLPGCTVQLVNASPCPNHA
                     "
     misc_feature    184..2007
                     /gene="LOC139842276"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    190..261
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    271..360
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    382..465
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    478..567
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    577..660
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    676..765
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    781..861
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    874..963
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    985..1068
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1093..1170
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1180..1263
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1279..1479
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1489..1572
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1588..1677
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1693..1773
                     /gene="LOC139842276"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgatttatt acagaactct aaactcatta acaaatcatc aaactcttga ccccaccgta
       61 gcttacttca attcaatctc atcagaccca ctatatttcc tgttgggttc atgcagaaac
      121 ttgaattcac tcaaggagtt acattctttg cttatagtag aaggccaatc aaaccaacaa
      181 agtttgcaaa cgaaacttgt aagtatatac ggatcgtttg gggacatgaa aagcgcacgc
      241 ttggtgttcg atcaaatgcc tcacccaaat atgttttcat ataaagtgat gattaggtgg
      301 tattttataa atgatttaca ttttgacact cttaggttct acaagagtat gagcaaaagt
      361 ctagacgaat atgataacat cgtgttttcg attgtagtaa aggcatgtac agaattgcga
      421 gatataaatg aagggaagaa agtgcattgt gatattgtga aggctggttg tcgggacggt
      481 tttgttttga ctagtcttgt agatatgtac gctaaatgtg gcgatcttat atgttcacaa
      541 agtgtttttg atagtattgt tgatagagat gttgtgtctt ggacatctat gatagttgcg
      601 tacgtgcaaa acggttgtgc tggtgaagca ttagcgttgt ttaatagaat gagaagtgga
      661 ttagttgaag gaaatcaaca tacgttaggt agcgttgttt cagcttgcac aaagttacga
      721 gctttacatc aagggaagtg ggttcatggt tacattataa agaatggggt cgatctcaat
      781 tcacatatag ttagttcttt agtagacatg tatgttaaat gtggatccat atgtgacgct
      841 cgatctgctt ttaacgagct tacaagtgtc gatcttgtca cttggacaac tatgattgtc
      901 gggtacagtc aaaattgtta cccacatgaa gcaattgcat tgttcactaa taagaagtat
      961 ttttatatta tgcctaattc ggttaccatt tcaagtgtga tatccgcttg tgcgcaaatg
     1021 gggagtttaa aactaggtaa aggtatacat tgtcatgaga ttaagctagg attagaagat
     1081 ggtaatgtga taaacgcgct aattgacatg tatgcaaaat gtgagatgat taaagatgct
     1141 cgttacttat tcgagagctt ttcaaacaaa gatttggtta catggaattc aattattaac
     1201 gggtacgccc aaattggatc tacgtacgag gttacaagat tatttcatcg aatgagatcc
     1261 gaaggttttc gcccagatga atatactata gtgaccctgc tttcgtgttt tgtttcagtt
     1321 ggtgatcttc aaattggttc ttctcttcac gcgtattcca caaaaagatc gctttcgagt
     1381 gataataatg tatatatcaa cacagcactt atgcattttt acgccaaatg tggtgaatta
     1441 aaaatcgctc gtcgtgtttt tgatggtatg ggcgagaaga acacgatttc atggaacgtg
     1501 ttaatcgatg cttatggtat gcaaggagat tgtaatggtt ctatttcagt ttttaatgat
     1561 atggtcaagg caaatttgga tcctaatgac acaacattca tagcattatt atcttcttgt
     1621 agtcacacag gagcaattga aggatgcaaa ttctttaact taatgcgtca agaatttggt
     1681 tttgttccaa acatgaaaca ttacacttgt ttggttgacc ttttgtctcg ttctggcagg
     1741 ctcgaagaag cattcagttt cattaaagat atgccggttc aaccagacgt gacccttttg
     1801 ggatcatttc tccatgggtg cagtttgcac tcgaggtttg accttggtca acttgcagtt
     1861 agttggattt ttaaccagca tccaaatgat gcttcgtatt atgttctcgt gtcgaattta
     1921 tacgcttcag atggaagatg gagccaagtt tcttatataa gagagttgat gaaggtgaaa
     1981 gatttgtgta agttgcctgg ttgtacagta caactggtta atgcatcacc ctgtccgaac
     2041 catgcttgat ccttgaagtt ttttgagacc tgtcgctttc atcattgatc tcacaatctg
     2101 aagttgttcc caattttctc cttcagctga tatattagac aacaaagtat aatatcctgt
     2161 gtcattaatc ttttcaattt tttcttgaat taattcgatc atatccagtc ttctatgaat
     2221 tcgacaacca cttaacaaag aaccccaaat cccagaattg ggtggaaacg gtatagaa
//
LOCUS       XM_071832438             540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842277), mRNA.
ACCESSION   XM_071832438
VERSION     XM_071832438.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..540
                     /gene="LOC139842277"
                     /note="uncharacterized LOC139842277; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842277"
     CDS             1..540
                     /gene="LOC139842277"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688539.1"
                     /db_xref="GeneID:139842277"
                     /translation="MKIFMLNSLWPLDVDCKSTSTDNENIYVKLPLAEVLENMPNYGK
                     FLKTLMSKKGDVEQASTAFLKKECDGILKNITYHQKWMLTSLANSGASINFMPYSVYK
                     RLGLGDLSPTTMGVKLIDQSINSSVGIIEDLIVKVWDMEFPIDFVIVDIKEDLVVPLV
                     LGRSFLATAGSFFDFRTRK"
     misc_feature    256..501
                     /gene="LOC139842277"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(262..264,268..270,274..276,346..354,478..480)
                     /gene="LOC139842277"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    262..270
                     /gene="LOC139842277"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    262..264
                     /gene="LOC139842277"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(346..357,367..378)
                     /gene="LOC139842277"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaaaatat ttatgttaaa ctccctttgg cctttagatg tggattgtaa gtcaacttca
       61 accgacaatg aaaatattta tgttaaactc cctttggcgg aggtgctcga gaatatgccc
      121 aactatggga aatttttgaa gacactcatg tccaaaaagg gagatgttga gcaagcatcc
      181 accgctttct tgaaaaagga gtgtgatgga attttaaaaa atataaccta ccatcaaaaa
      241 tggatgctca catctttagc taattcggga gcaagtatca acttcatgcc ctactccgtt
      301 tacaaaaggc taggcctagg tgacctttca cccactacaa tgggagttaa attaattgat
      361 caatcaatta actctagtgt ggggatcatc gaagacttaa ttgttaaggt gtgggacatg
      421 gaatttccca ttgactttgt tattgttgat ataaaggaag acctggttgt gccccttgtt
      481 ttgggaagat cattcttggc aaccgcaggt tctttctttg actttagaac caggaaatga
//
LOCUS       XM_071832439             423 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842280), mRNA.
ACCESSION   XM_071832439
VERSION     XM_071832439.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..423
                     /gene="LOC139842280"
                     /note="uncharacterized LOC139842280; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842280"
     CDS             1..423
                     /gene="LOC139842280"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688540.1"
                     /db_xref="GeneID:139842280"
                     /translation="MYFHVKWSLAFVVVVVESKWGYTPLKRSAYLVKGMRLVTLFVML
                     YFWICGAVLVWLYSYSFQFAVSRSWTFIVVFTMLSSFSMMMCLLRITAATTVLYNYCK
                     ALHGELVIETEEGCNHDYVNLPSYLDKVPNVVTFVTTV"
ORIGIN      
        1 atgtattttc atgtgaaatg gtcattggct tttgtagtgg ttgtggttga gtccaaatgg
       61 ggatacacgc ctttgaagag aagcgcgtat ttggttaaag ggatgagatt agttacgttg
      121 tttgtgatgt tgtatttttg gatttgtggt gcggttttgg tgtggttgta ttcatatagt
      181 tttcaattcg cggtgagtcg tagttggacg tttattgttg tgttcacgat gcttagttcg
      241 ttctcgatga tgatgtgttt gcttaggatc actgctgcaa ccaccgtgtt gtataattac
      301 tgcaaggctt tgcatggtga attggtaatt gagactgaag aggggtgtaa tcacgattat
      361 gttaacttgc cttcttatct tgacaaggtt ccaaatgttg ttacttttgt cacaactgtt
      421 tga
//
LOCUS       XM_071832440             573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ethylene-responsive
            transcription factor ERN3-like (LOC139842281), mRNA.
ACCESSION   XM_071832440
VERSION     XM_071832440.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..573
                     /gene="LOC139842281"
                     /note="ethylene-responsive transcription factor ERN3-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139842281"
     CDS             1..573
                     /gene="LOC139842281"
                     /codon_start=1
                     /product="ethylene-responsive transcription factor
                     ERN3-like"
                     /protein_id="XP_071688541.1"
                     /db_xref="GeneID:139842281"
                     /translation="MNGGAHVSGATSARKRFIGVRQRPSGRWVAEIKDNIQQIRVWLG
                     TFDTAEKAARAYNEAACLLRGSNTRTDFWLCNPSNKSLALALKNISLLLQRLKERNGD
                     NFKNDGNSYISDCSATSEFCQRNTILDDVEAPNVEGNKEIDLGMNDLLFVDNAISSME
                     YSPFDIAEEITKENYNDDPFMFIEAIKRMK"
     misc_feature    46..216
                     /gene="LOC139842281"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; Region: AP2; smart00380"
                     /db_xref="CDD:197689"
     misc_feature    order(52..57,61..63,67..69,73..75,79..81,91..93,97..99,
                     118..120,124..126,133..135)
                     /gene="LOC139842281"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
ORIGIN      
        1 atgaacggtg gagcccacgt tagtggagct acaagtgcac gaaaacggtt tattggggtc
       61 cgtcaacggc cttctggaag atgggtggct gagatcaaag acaacataca acaaataaga
      121 gtatggctag gtacatttga tactgctgaa aaagctgcca gagcttacaa tgaagccgct
      181 tgtttgcttc gtggatccaa cacgcgaacc gatttttggc tgtgtaatcc atctaacaaa
      241 tctcttgctc ttgctttgaa aaacatcagt cttcttcttc aaagacttaa agaaagaaac
      301 ggagataatt tcaaaaatga tggaaacagt tatattagtg attgtagtgc aacttctgaa
      361 ttttgtcaaa gaaatactat tttagacgac gtagaagcgc ctaatgttga aggaaacaaa
      421 gagatagatt tgggtatgaa tgatttatta tttgttgaca acgcgatatc gtctatggaa
      481 tattctccat tcgatattgc ggaagagata acgaaggaaa actataacga tgatccgttt
      541 atgtttattg aagcgattaa gagaatgaaa tga
//
LOCUS       XM_071832441            2487 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842283), mRNA.
ACCESSION   XM_071832441
VERSION     XM_071832441.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2487
                     /gene="LOC139842283"
                     /note="uncharacterized LOC139842283; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842283"
     CDS             1..2487
                     /gene="LOC139842283"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688542.1"
                     /db_xref="GeneID:139842283"
                     /translation="MWRHHGELPQPPEVHNTTDPLRNFLHDIQLEEVPNFEKEGPNDD
                     ETMNDTTATGLEDLIDSTQTELYPSSKLSSLEFLAKLTHIKVLNKWTNTSFDQLLELL
                     IQSHPPNNTIPKSFYETKKWMRNIGLGYQAIHACKNDCCLFYKEYQDLENCPICNESR
                     WKDERTTGKKVPNKVLCYFPITPRLKRLYSFRYTAKDMTWHATGRCNEEGKMRHPVDG
                     RSWKEIDKRYPDFAREHRNVRLGLADDGFNPFGNINNPYCMWPVILITYNTPPWICMK
                     KSSLMLTMLIPGPKSPGKDIDVYLRPLVDELKILWSEGVVTHDSVTNTYFQMKAMPIW
                     TINDYPARSSLSGWSGQGYKACPTCNEDTPAMRVKNKIVFVSHRPNLESNHPYRESLE
                     FNGKVDHTSKPRKFKVADIENQLTDLLLVGNSRKNHRNVGEKRKRPPKCRRHNWTKIS
                     IFRELEYWKYVPLQHNLNVMHIEKNVLRLFWEEAIYGGAVYMTWINKAKPEGCIAEGY
                     VADEALTACSMSLEGIQTRFNRPERYADGPIRSCEIRVFRSLCKFISKGVFKSLACNI
                     QDKIHWYVLDNCSDNEEYKNQFKAENSNMDMKTNFPSWFTNQYSDELICLAEGPVGSS
                     NHYSSCNVNGVRFVVSNRDNRRTTQENGIATLAYVGAPVSKYYGRLEDIVELHYGGAF
                     SVVLFRCRWFNTENTQNRKRTVKVNNITSIDTKDEWYQDDQHIFATQAQQLFYIDDPS
                     KTSSSWKVVHEVHHRKLWDRDIIKDTIRDVVHETNSSDLSLDADLDNMTYTSMSVPGE
                     SIPIQFNPPTYELNPQIPQNEAYSSDDDNY"
     misc_feature    625..1245
                     /gene="LOC139842283"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    <1486..1599
                     /gene="LOC139842283"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2020..2247
                     /gene="LOC139842283"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgtggcggc atcacggtga actaccacaa ccacccgaag tacacaacac aacggaccct
       61 ctaagaaatt tcttgcacga tattcagttg gaggaagttc ctaattttga gaaggaaggt
      121 ccgaatgacg atgagactat gaatgacacg accgcaactg gtcttgagga tttaattgac
      181 tccacccaaa ccgagctata tcccagtagc aagttgtcct cattagagtt tttagccaag
      241 ttaacacaca ttaaggtctt gaacaaatgg acgaatactt cattcgacca attgttagaa
      301 ttactcatac aatcacatcc cccaaataac acaattccga aatcatttta cgaaactaag
      361 aagtggatga gaaatatcgg tttagggtat caagcgatac atgcttgtaa gaatgattgt
      421 tgtttgtttt ataaagaata ccaggatttg gaaaactgtc caatatgtaa cgagagtaga
      481 tggaaagatg aacgcacaac ggggaagaaa gttcctaata aagttttgtg ttattttcca
      541 ataactccaa gactaaaacg tttgtacagt ttcagataca ctgcaaagga tatgacttgg
      601 catgctactg ggcggtgcaa tgaagagggt aagatgcgtc atcctgtaga tggtcgatct
      661 tggaaagaaa ttgacaaaag atatccagat tttgcacgtg aacacagaaa cgttcgatta
      721 gggttggctg atgatggttt caatccattc ggaaacataa ataatcctta ctgtatgtgg
      781 ccagtaatat tgataacgta caatacgccg ccgtggatat gtatgaaaaa aagttctctc
      841 atgttgacta tgttaattcc tggtcctaaa tcacctggaa aagatattga tgtttacttg
      901 aggcctttgg ttgatgaact gaagatttta tggtccgaag gagttgttac acatgactca
      961 gttacaaaca cgtattttca aatgaaagca atgcctattt ggaccataaa cgattatcct
     1021 gcccgtagta gtttgtccgg ttggagtggc caaggctata aagcatgccc tacatgtaac
     1081 gaggacactc ctgctatgcg tgtgaaaaat aaaattgttt ttgtcagtca cagaccgaac
     1141 cttgaatcga atcacccata cagagaaagc ttagaattca atggtaaggt tgatcatacc
     1201 tctaaaccta gaaagttcaa agtagctgat atcgaaaacc aacttacaga tttgttgcta
     1261 gttggtaatt ccagaaaaaa tcatagaaat gttggtgaaa aaagaaaacg tccccctaag
     1321 tgtcgtcgtc acaactggac taaaatttct atttttcggg aacttgagta ttggaaatat
     1381 gttccactac aacacaactt gaatgtcatg catattgaaa agaatgtgtt gaggctattt
     1441 tgggaagagg ctatatatgg aggggctgtt tacatgacgt ggataaataa agctaagcct
     1501 gaaggttgta tagctgaggg gtacgttgcc gatgaagcat taactgcatg ttcaatgtct
     1561 cttgaaggta tacagacgag atttaatcgt cctgaaagat atgcggacgg gccaattagg
     1621 tcatgtgaga ttcgtgtgtt cagatcgtta tgtaaattta tcagtaaagg tgtgttcaaa
     1681 tctctagcct gtaatattca ggataaaatt cactggtatg tactcgacaa ttgttctgac
     1741 aacgaagaat acaaaaatca gtttaaagca gagaactcca atatggacat gaaaacaaat
     1801 tttcctagtt ggttcaccaa ccagtatagc gatgaattga tctgtctagc tgaaggaccg
     1861 gtgggtagct caaaccatta cagttcctgc aatgtgaatg gtgttaggtt tgtggttagc
     1921 aatcgcgata atcgacgcac aacacaagaa aatggaattg caacactcgc atatgtcggt
     1981 gctcctgtct ctaagtatta tggtcggttg gaagatattg ttgagttgca ttatggtggt
     2041 gcatttagtg ttgtgttatt cagatgccgg tggttcaata ctgagaacac ccagaaccgt
     2101 aaacgtacag ttaaagtgaa taacataact agtattgaca cgaaagatga gtggtaccaa
     2161 gatgatcaac acatttttgc aacacaagct caacaactct tttacatcga cgatccttcc
     2221 aaaacctcta gcagctggaa ggtcgttcat gaggtacatc atcgaaaact ctgggataga
     2281 gacattatca aagacaccat acgggatgtt gtacacgaaa ccaattcatc cgatcttagc
     2341 cttgatgctg atttagataa tatgacttat acaagtatga gtgtacctgg agaatcaata
     2401 ccaattcagt ttaatccacc aacatatgaa ctaaatcccc aaattcctca aaatgaagct
     2461 tactctagcg atgatgataa ttattga
//
LOCUS       XM_071832442             639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842285), mRNA.
ACCESSION   XM_071832442
VERSION     XM_071832442.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..639
                     /gene="LOC139842285"
                     /note="uncharacterized LOC139842285; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842285"
     CDS             1..639
                     /gene="LOC139842285"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688543.1"
                     /db_xref="GeneID:139842285"
                     /translation="MATGHTIDPTLTPATEDFNSPDHPLFLHQNDHPGLILISKKLTG
                     SDNNSSWRRSMTIALNAKNKLQIVTNQFVEPEVNLRSRALWERTNDMIISWILNTITD
                     QISNSLNFVNTACKELHEHYSQLDGHRIYQLTNDITQHKQNQCTIEVYYQKLKGYWDE
                     IDAIEAPYVRTFACTCENGRLNAERDQGKRLMQFLMGLDESYSNIRDQVLLI"
     misc_feature    82..228
                     /gene="LOC139842285"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
ORIGIN      
        1 atggcgactg gtcacacaat cgatccaaca ctaacacctg caactgaaga cttcaattca
       61 ccggatcatc ctctgttcct tcatcaaaat gatcaccctg gcttaatcct catttcgaag
      121 aaacttacag gatcagataa taatagttcc tggcgacgat ctatgacgat cgcactaaat
      181 gctaagaaca aattacaaat tgttactaat caatttgttg aacctgaagt caatttaaga
      241 tctagggcac tatgggaaag gacaaatgat atgataatct cctggatact caacacgatc
      301 acagatcaaa taagcaattc tctaaacttt gttaatacag cttgtaaaga attacatgag
      361 cattactctc aattggatgg tcacagaatc taccaactca caaatgacat cactcaacat
      421 aagcagaatc aatgcactat agaggtatat tatcaaaagc ttaaaggtta ctgggatgaa
      481 atagatgcaa tagaagcacc atatgtccgt acctttgctt gtacatgtga aaatggaagg
      541 ttaaatgcag aaagagatca aggaaagagg ttaatgcaat ttctcatggg gcttgatgag
      601 tcctactcta acatcaggga ccaagtatta ctaatataa
//
LOCUS       XM_071832444             909 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842287), mRNA.
ACCESSION   XM_071832444
VERSION     XM_071832444.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 48% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..909
                     /gene="LOC139842287"
                     /note="uncharacterized LOC139842287; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842287"
     CDS             31..909
                     /gene="LOC139842287"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688545.1"
                     /db_xref="GeneID:139842287"
                     /translation="MFIFQNETFLFLDTEFWKRLLGIAFSGYLENIHIDGWATFLLRF
                     RQRFLPRASQMSSSPQFPIADYTCSSRWTIMPLGFLNQLEKFKSFYDDDTQNEEEKGD
                     TSNPEAEGIIKFNPPDYMYLIGLGDGSDDLYPSWAECDKILIPVHFSDLEHFILLTLN
                     LDEQRVLVYDSLKGCLKKGQLEAVFKNLSDNLPLYMKAIDYFNKKQDSQIVDYYENRE
                     DVELMIEDAPYVPMQSGGHDARCCLRPCVSLNGLRKVLFACLRMFEDLRKVMFASLRL
                     FKRYTQVAVFVLAYVS"
     misc_feature    <439..>744
                     /gene="LOC139842287"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 ctaatcctca ataagcaaga tacgcgttgc atgttcattt tccaaaatga aaccttcctc
       61 ttccttgata ctgagttttg gaaacgttta ttgggaattg cattttctgg ttatttggaa
      121 aacatacata ttgatggatg ggctaccttc ctgttgagat ttcggcagag gtttctgccc
      181 cgagctagcc agatgtcctc gagtcctcag tttccgattg cagattatac atgtagttct
      241 cgatggacga ttatgccatt gggtttcctc aatcaactgg agaaattcaa gtccttttat
      301 gatgatgaca ctcaaaatga ggaggagaag ggggatacat ctaatcctga agcagagggg
      361 atcattaaat tcaatccccc agattatatg tatttgattg gtcttgggga tggtagtgat
      421 gacctttatc catcctgggc tgaatgtgat aagattttga ttccagtaca tttttcagat
      481 cttgaacatt ttatactact cactttgaac ttagatgaac agagagtatt agtctatgat
      541 agtttaaagg gttgtttgaa aaaaggtcaa ctcgaggctg tcttcaaaaa cttatcagac
      601 aacttgccgt tatatatgaa ggctattgat tactttaaca agaagcagga ctcacaaatt
      661 gttgactatt atgagaacag agaagatgta gagttgatga tcgaggatgc accgtatgtg
      721 ccaatgcaga gtggtggcca tgacgcaagg tgttgtttgc gtccttgcgt ctctttaaat
      781 ggcttacgca aggttttgtt tgcgtgcttg cgtatgtttg aagacttacg caaggttatg
      841 tttgcgtcct tgcgtctctt taaaagatat acgcaagttg ctgttttcgt gcttgcgtat
      901 gtttcatga
//
LOCUS       XM_071832445             441 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842288), mRNA.
ACCESSION   XM_071832445
VERSION     XM_071832445.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..441
                     /gene="LOC139842288"
                     /note="uncharacterized LOC139842288; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842288"
     CDS             1..441
                     /gene="LOC139842288"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688546.1"
                     /db_xref="GeneID:139842288"
                     /translation="MSISEENVQQEPVDVLENEEDASSSTTGKKRSRVWDYFVKLPLG
                     DEGVQKVRCNNCSTLIKTEFRTSNMKRHIPKCFINDQSAPPQNRIRLDQTVYREKLVI
                     SIIKHGYPFSYVENEATRDLHMFLHPDTKPITRNTTKRDVLKIF"
     misc_feature    100..219
                     /gene="LOC139842288"
                     /note="BED zinc finger; Region: ZnF_BED; smart00614"
                     /db_xref="CDD:214746"
ORIGIN      
        1 atgagtattt cagaagagaa tgttcaacaa gaacccgtgg atgttttaga gaatgaagaa
       61 gacgctagtt cttctacaac gggtaagaag cgttctcgtg tatgggatta ttttgttaag
      121 ttacctttag gggatgaggg agtgcaaaag gtgagatgta acaactgtag cacactgatt
      181 aagactgagt ttagaacttc caatatgaaa cggcatatcc ccaagtgttt tataaatgat
      241 cagtctgctc caccacaaaa tcgtattcgt ttagaccaaa cagtttaccg agagaagttg
      301 gtaatttcta ttatcaaaca tggctaccca ttctcctatg ttgaaaatga ggcaacaaga
      361 gatttgcaca tgtttttaca tccggataca aagcccataa caagaaacac cacaaagaga
      421 gatgttctga agattttttg a
//
LOCUS       XM_071832446            2640 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842289), mRNA.
ACCESSION   XM_071832446
VERSION     XM_071832446.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2640
                     /gene="LOC139842289"
                     /note="uncharacterized LOC139842289; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139842289"
     CDS             1..2640
                     /gene="LOC139842289"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688547.1"
                     /db_xref="GeneID:139842289"
                     /translation="MEGDDGRDCRVVKDGEDGGSHGGGDRVVAGWPVTGYGGVVSSYE
                     SCDNINPSSDQAIKKNMKGSKNAQPKKITSFFKRQSGDITDNTNIEAKRSKVSTDQQE
                     HECYNQSNVGPAETSVPNNVDVNANSLERDPRKRQPIWNYPPNQKEQVRLKYLSVGPF
                     QVHLTEYPGKGPQKHKRRFQYSWFSIFKNWLEYSPTTDSAYCFLCYLYSDKPNVRYGT
                     DAFTVKGFNNWKKVNDGKHCAFLKHIGCSQHRDAVLFCDNLLNQDRHIENVIEKKSAE
                     EVLKNRLRLKTSVDIVRWLTFQACAFRGRDETSNSKNRGNFIELLKLLASYNDEVSKV
                     VLENAPFNSKFTSGDIQKEILSIIANKVSKHIRSEVGNSYFCVMVDEARDESKREQMA
                     IVIRFVDKDGIIRERFLDLVHVTDTSAMTLKTNLWKTLLQYEFDTSKIRGQGYDGASN
                     MRGEFNGLQALVIKESPYAYYVHCFAHRLQLALVAASREVIPIHQFFNRLGSIVNVIC
                     ASSKRHDELQKSKAIEIRHLLELGEIKSGKGQNQIGTLKRAGDTRWGSHFHSICSLLN
                     MFNATRLVLEGIIEDSSSYSQRGDAADAYTYLTSFEFVFIFELMGRTNILSQQLQKKS
                     QDIGNAIELVSATKESLNDFRNNNWESFFEHVQEFSTKHKIEMPDFNSLYKSERYRPR
                     QKDNHVSVEHFYRVDIFICAVDKQLHELASRFDDKATELLTLSSALVPRKASEMLNID
                     QICSLVEKYYPTDFTEHEMILLRYEFELYNAEKSKNRKLSGISSISGLCRFLVESKKC
                     EAYGLIERLTRLILTLPVSTTTTERGFSAMNIIKNRLRNKMSDDFLSSNLVVYIEREI
                     AEMFDSESVIDEFKDLKSRRAEL"
     misc_feature    655..1371
                     /gene="LOC139842289"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    <2401..2568
                     /gene="LOC139842289"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggaaggtg atgatggaag ggattgtagg gtggtgaagg atggtgaaga cggtggtagt
       61 cacggtggtg gtgatagggt tgttgcaggg tggccggtga cgggttatgg tggtgttgtt
      121 tcatcttacg agagctgcga caacatcaat ccatctagtg atcaagccat caagaaaaat
      181 atgaaaggat ctaagaatgc acaaccaaag aaaattactt cttttttcaa gaggcaatct
      241 ggtgatataa cagataatac aaacatagag gcaaaacgtt ccaaagtgtc cacggatcag
      301 caagaacacg aatgttataa tcagtcaaac gtaggtcctg ctgaaacttc ggtgccaaat
      361 aatgtagatg ttaatgctaa ttctttggaa agagatccta gaaaacgaca accaatatgg
      421 aactacccac ctaatcaaaa agaacaagta aggcttaaat atttgagtgt cggccctttt
      481 caagtccatt tgacagagta tcccggtaaa ggtccacaaa aacataaacg tagattccaa
      541 tactcttggt tcagtatttt caaaaattgg ttagagtatt ctccgacaac agattcagcg
      601 tattgctttc tttgttactt atatagtgac aaaccaaacg ttcggtatgg cactgatgct
      661 tttacggtta aaggattcaa caactggaaa aaagttaatg atggtaaaca ttgtgcattt
      721 ctaaaacata ttggttgttc acagcataga gatgcagttc tattttgtga taatttgttg
      781 aaccaggata gacacattga aaatgtcata gaaaagaaaa gcgcagagga agtcttgaag
      841 aatcgtttac ggttgaaaac ttcagtggat atagttcgtt ggttaacatt ccaagcttgt
      901 gcttttcgag ggcgtgatga aacttctaac tcaaagaatc gtggtaattt tatcgagttg
      961 ttaaaactcc tagcctcgta caatgatgaa gtttccaaag tggtgttaga gaatgctcct
     1021 tttaactcaa agtttacttc aggtgatatt caaaaggaaa ttttgagtat tattgcaaac
     1081 aaggttagta agcatattcg aagtgaagta ggtaactctt acttttgtgt tatggttgat
     1141 gaggcacgag atgaaagtaa acgagaacaa atggctatag ttataagatt tgttgataaa
     1201 gatgggatta taagagaaag attcctagat ttggtgcatg ttacagacac ctcggcaatg
     1261 accctcaaaa caaatttgtg gaaaacactt ttgcaatatg agtttgatac tagcaaaatt
     1321 cgtggtcaag gttatgatgg tgctagtaac atgagaggag aatttaacgg gttacaagca
     1381 cttgttatta aagaatctcc ttatgcatat tatgttcatt gttttgctca tagactgcaa
     1441 cttgctttag ttgctgcttc aagagaagtt attccgattc atcaattttt caacagattg
     1501 ggttctattg ttaatgtaat atgtgcttct agtaagcgtc acgatgagct acaaaaatcg
     1561 aaggcaatag agataagaca tttgttggaa cttggtgaaa tcaaatcggg taaggggcaa
     1621 aatcaaattg ggaccttgaa acgagcaggt gatacacgtt ggggttctca ttttcactcg
     1681 atttgtagct tacttaatat gtttaatgct actcgtttgg tattggaggg tataattgaa
     1741 gatagctcta gctattctca acgtggtgat gctgctgacg cctacactta tctgacgtca
     1801 tttgagtttg tgtttatatt tgaattaatg gggaggacta atattttatc tcagcaactg
     1861 caaaagaaat cccaagatat cggcaacgcc attgagttag tgtcagcgac aaaggaaagt
     1921 ttgaacgatt ttagaaataa caattgggaa agtttctttg aacatgtaca agaattctcc
     1981 acaaagcata aaatagagat gcctgacttt aattctttat ataagtccga acgatatcgc
     2041 cctcgacaaa aagacaatca tgttagtgtt gagcatttct atcgagtaga tatatttatt
     2101 tgtgcagtag ataaacaatt acatgagttg gctagtagat ttgatgataa agccacagag
     2161 ttactaactc ttagttctgc tttagtccct agaaaagctt ctgaaatgtt gaatattgac
     2221 caaatttgct ctcttgttga gaaatattat cccacggatt ttactgaaca tgaaatgatt
     2281 ctattgaggt atgagtttga gttgtataat gctgagaagt caaagaatcg aaagctgagt
     2341 ggcatttcat ctatttctgg gctatgtagg ttccttgtag aaagtaagaa gtgtgaagca
     2401 tatggtttga ttgaaagatt aacgcgacta attttgacac ttccggtttc cactacaaca
     2461 accgagaggg gattttcagc aatgaacatt attaagaatc ggcttcgtaa taaaatgtca
     2521 gatgattttc tttcttctaa cttggtggtt tatattgaaa gagaaattgc agaaatgttt
     2581 gattctgagt ctgtaattga tgagtttaag gaccttaaga gtcgtcgagc tgagttgtag
//
LOCUS       XM_071832447             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842290), mRNA.
ACCESSION   XM_071832447
VERSION     XM_071832447.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139842290"
                     /note="uncharacterized LOC139842290; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842290"
     CDS             1..501
                     /gene="LOC139842290"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688548.1"
                     /db_xref="GeneID:139842290"
                     /translation="MAEELYVDEYLRKPTSSDIARLYSAHEEKHGFKGMLRSIDCMHW
                     KWKICQNAWKGAAGANNNVNVLNQSPLFDDIKNGNAPFAPFTVNENEYTNGYYLTDGI
                     YPYWSTLMKAYSTPTDEPLAKFKRFQESARKDVERTFGILQGRFHILQMAGRPHTVNK
                     LRLRKT"
     misc_feature    22..495
                     /gene="LOC139842290"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggctgaag aactatatgt tgatgaatat ttgaggaaac caacgagtag cgatatagct
       61 cgtttgtata gcgcgcacga agaaaaacat gggtttaagg gaatgcttag aagcattgac
      121 tgcatgcatt ggaagtggaa gatttgtcaa aatgcttgga aaggtgccgc aggtgcaaac
      181 aacaatgtta atgttttgaa tcaatctccg ttgtttgatg acattaagaa tggaaatgca
      241 ccattcgctc catttactgt aaatgaaaat gaatacacaa atggttatta tttgacggac
      301 ggtatttatc catattggtc aacgttgatg aaggcatatt cgaccccaac cgacgagcca
      361 cttgcaaaat ttaaaagatt tcaagaaagt gcacgtaaag atgtcgaaag aacattcggt
      421 attcttcaag gtagattcca tattttacaa atggctggac gaccacacac cgtcaataag
      481 ttgaggctga ggaaaacatg a
//
LOCUS       XR_011757432            1169 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842291), transcript variant X1, ncRNA.
ACCESSION   XR_011757432
VERSION     XR_011757432.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1169
                     /gene="LOC139842291"
                     /note="uncharacterized LOC139842291; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842291"
     ncRNA           1..1169
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842291"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139842291"
ORIGIN      
        1 gtttcacaaa atcattcatt cattcgctac ataaaaaaac cagacaacca gacttctaaa
       61 tccacggcgg aggttgaaga aggcggttta atcggttgat ggaataatcg aaacaactgc
      121 ggaggttgaa gaatacggga tagcctaatc ccttttgttt ctatctccat cgaaaaatct
      181 cgctataatc aattcaaaat acaactcatt caatttcact tcacattgat ttggttacat
      241 aaaccctaac tcttacccta aatcgcgcaa ttaaaccaaa tcgttatcaa gtacgaatca
      301 aataatcatc aaagccgtta agctgttgat tttcaaagtt atcatgtaag catcagtaga
      361 gattataatt gaaaacatac gaatttaacc ggaaacggaa gcataccgat ttttccaaca
      421 ggtaagcaaa cgatcactct tttaatgtca tcaatgtttt taattgtaat tttgatataa
      481 ataaatttat atcaccagca tgatcaatgt tgttggagat ctgtattacc gagttttttt
      541 tttttttaat taaagatgct aattttaaat ttcttgttat tgtctatgtt taaaccataa
      601 tgaacgtagt tgagattact agcatttcag ttaatgcgta cggcagaatc gtaaagcaca
      661 taaggttttg tcgtttgatt agctatgaat acacgaaggt ttgttgttac ttttgtttgt
      721 aacctatatt gtgcggtgtt tcataatatg tatttatgta tttatacatg tttctttcat
      781 tagtggctta gatcacttag ttgttggtat gttgctagcc aattccacca tcataattct
      841 ggattggcat acgactgaaa tattctgtac cagcggtgtt ggtggtaaga ttcaacgatc
      901 atcgtcgtct tcataaagac acactttgca atcgccgtat catgttcatc aggtgttatg
      961 taaggcgtta aagtctatgg cccctcaagt gggtttattt tttgatcttt ttcccgtcat
     1021 cggtgaaaca tcgggtattc tgtaaggagt aatatatacg actaaatcta aagcgagaag
     1081 ttcgatctaa gtttagaatt gggtttgttt gctgccggag ctatgatatt aacaactgat
     1141 cttgcctagc atatactttg aaaacaagt
//
LOCUS       XR_011757433            1144 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842291), transcript variant X2, ncRNA.
ACCESSION   XR_011757433
VERSION     XR_011757433.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1144
                     /gene="LOC139842291"
                     /note="uncharacterized LOC139842291; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842291"
     ncRNA           1..1144
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842291"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139842291"
ORIGIN      
        1 gtttcacaaa atcattcatt cattcgctac ataaaaaaac cagacaacca gacttctaaa
       61 tccacggcgg aggttgaaga aggcggttta atcggttgat ggaataatcg aaacaactgc
      121 ggaggttgaa gaatacggga tagcctaatc ccttttgttt ctatctccat cgaaaaatct
      181 cgctataatc aattcaaaat acaactcatt caatttcact tcacattgat ttggttacat
      241 aaaccctaac tcttacccta aatcgcgcaa ttaaaccaaa tcgttatcaa gtacgaatca
      301 aataatcatc aaagccgtta agctgttgat tttcaaagtt atcatgaaaa catacgaatt
      361 taaccggaaa cggaagcata ccgatttttc caacaggtaa gcaaacgatc actcttttaa
      421 tgtcatcaat gtttttaatt gtaattttga tataaataaa tttatatcac cagcatgatc
      481 aatgttgttg gagatctgta ttaccgagtt tttttttttt ttaattaaag atgctaattt
      541 taaatttctt gttattgtct atgtttaaac cataatgaac gtagttgaga ttactagcat
      601 ttcagttaat gcgtacggca gaatcgtaaa gcacataagg ttttgtcgtt tgattagcta
      661 tgaatacacg aaggtttgtt gttacttttg tttgtaacct atattgtgcg gtgtttcata
      721 atatgtattt atgtatttat acatgtttct ttcattagtg gcttagatca cttagttgtt
      781 ggtatgttgc tagccaattc caccatcata attctggatt ggcatacgac tgaaatattc
      841 tgtaccagcg gtgttggtgg taagattcaa cgatcatcgt cgtcttcata aagacacact
      901 ttgcaatcgc cgtatcatgt tcatcaggtg ttatgtaagg cgttaaagtc tatggcccct
      961 caagtgggtt tattttttga tctttttccc gtcatcggtg aaacatcggg tattctgtaa
     1021 ggagtaatat atacgactaa atctaaagcg agaagttcga tctaagttta gaattgggtt
     1081 tgtttgctgc cggagctatg atattaacaa ctgatcttgc ctagcatata ctttgaaaac
     1141 aagt
//
LOCUS       XR_011757434            1084 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842291), transcript variant X3, ncRNA.
ACCESSION   XR_011757434
VERSION     XR_011757434.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1084
                     /gene="LOC139842291"
                     /note="uncharacterized LOC139842291; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842291"
     ncRNA           1..1084
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842291"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139842291"
ORIGIN      
        1 gtttcacaaa atcattcatt cattcgctac ataaaaaaac cagacaacca gacttctaaa
       61 tccacggcgg aggttgaaga aggcggttta atcggttgat ggaataatcg aaacaactgc
      121 ggaggttgaa gaatacggga tagcctaatc ccttttgttt ctatctccat cgaaaaatct
      181 cgctataatc aattcaaaat acaactcatt caatttcact tcacattgat ttggttacat
      241 aaaccctaac tcttacccta aatcgcgcaa ttaaaccaaa tcgttatcaa gtacgaatca
      301 aataatcatc aaagccgtta agctgttgat tttcaaagtt atcatgtaag catcagtaga
      361 gattataatt gaaaacatac gaatttaacc ggaaacggaa gcataccgat ttttccaaca
      421 ggtaagcaaa cgatcactct tttaatgtca tcaatgtttt taattgtaat tttgatataa
      481 ataaatttat atcaccagca tgatcaatgt tgttggagat ctgtattacc gagttttttt
      541 tttttttaat taaagatgct aattttaaat ttcttgttat tgtctatgtt taaaccataa
      601 tgaacgtagt tgagattact agcatttcag ttaatgcgta cggcagaatc gtaaagcaca
      661 taaggttttg tcgtttgatt agctatgaat acacgaagtg gcttagatca cttagttgtt
      721 ggtatgttgc tagccaattc caccatcata attctggatt ggcatacgac tgaaatattc
      781 tgtaccagcg gtgttggtgg taagattcaa cgatcatcgt cgtcttcata aagacacact
      841 ttgcaatcgc cgtatcatgt tcatcaggtg ttatgtaagg cgttaaagtc tatggcccct
      901 caagtgggtt tattttttga tctttttccc gtcatcggtg aaacatcggg tattctgtaa
      961 ggagtaatat atacgactaa atctaaagcg agaagttcga tctaagttta gaattgggtt
     1021 tgtttgctgc cggagctatg atattaacaa ctgatcttgc ctagcatata ctttgaaaac
     1081 aagt
//
LOCUS       XR_011757435             981 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842291), transcript variant X4, ncRNA.
ACCESSION   XR_011757435
VERSION     XR_011757435.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..981
                     /gene="LOC139842291"
                     /note="uncharacterized LOC139842291; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842291"
     ncRNA           1..981
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842291"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139842291"
ORIGIN      
        1 gtttcacaaa atcattcatt cattcgctac ataaaaaaac cagacaacca gacttctaaa
       61 tccacggcgg aggttgaaga aggcggttta atcggttgat ggaataatcg aaacaactgc
      121 ggaggttgaa gaatacggga tagcctaatc ccttttgttt ctatctccat cgaaaaatct
      181 cgctataatc aattcaaaat acaactcatt caatttcact tcacattgat ttggttacat
      241 aaaccctaac tcttacccta aatcgcgcaa ttaaaccaaa tcgttatcaa gtacgaatca
      301 aataatcatc aaagccgtta agctgttgat tttcaaagtt atcatgtaag catcagtaga
      361 gattataatt gaaaacatac gaatttaacc ggaaacggaa gcataccgat ttttccaaca
      421 gttgagatta ctagcatttc agttaatgcg tacggcagaa tcgtaaagca cataaggttt
      481 tgtcgtttga ttagctatga atacacgaag gtttgttgtt acttttgttt gtaacctata
      541 ttgtgcggtg tttcataata tgtatttatg tatttataca tgtttctttc attagtggct
      601 tagatcactt agttgttggt atgttgctag ccaattccac catcataatt ctggattggc
      661 atacgactga aatattctgt accagcggtg ttggtggtaa gattcaacga tcatcgtcgt
      721 cttcataaag acacactttg caatcgccgt atcatgttca tcaggtgtta tgtaaggcgt
      781 taaagtctat ggcccctcaa gtgggtttat tttttgatct ttttcccgtc atcggtgaaa
      841 catcgggtat tctgtaagga gtaatatata cgactaaatc taaagcgaga agttcgatct
      901 aagtttagaa ttgggtttgt ttgctgccgg agctatgata ttaacaactg atcttgccta
      961 gcatatactt tgaaaacaag t
//
LOCUS       XR_011757436            1049 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842291), transcript variant X5, ncRNA.
ACCESSION   XR_011757436
VERSION     XR_011757436.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1049
                     /gene="LOC139842291"
                     /note="uncharacterized LOC139842291; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842291"
     ncRNA           1..1049
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842291"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139842291"
ORIGIN      
        1 gtttcacaaa atcattcatt cattcgctac ataaaaaaac cagacaacca gacttctaaa
       61 tccacggcgg aggttgaaga aggcggttta atcggttgat ggaataatcg aaacaactgc
      121 ggaggttgaa gaatacggga tagcctaatc ccttttgttt ctatctccat cgaaaaatct
      181 cgctataatc aattcaaaat acaactcatt caatttcact tcacattgat ttggttacat
      241 aaaccctaac tcttacccta aatcgcgcaa ttaaaccaaa tcgttatcaa gtacgaatca
      301 aataatcatc aaagccgtta agctgttgat tttcaaagtt atcatgtaag catcagtaga
      361 gattataatt gaaaacatac gaatttaacc ggaaacggaa gcataccgat ttttccaaca
      421 ggtaagcaaa cgatcactct tttaatgtca tcaatgtttt taattgtaat tttgatataa
      481 ataaatttat atcaccagca tgatcaatgt tgttggagat ctgtattacc gagttttttt
      541 tttttttaat taaagatgct aattttaaat ttcttgttat tgtctatgtt taaaccataa
      601 tgaacgtagt tgagattact agcatttcag ttaatgcgta cggcagaatc gtaaagcaca
      661 taaggttttg tcgtttgatt agctatgaat acacgaagcc aattccacca tcataattct
      721 ggattggcat acgactgaaa tattctgtac cagcggtgtt ggtggtaaga ttcaacgatc
      781 atcgtcgtct tcataaagac acactttgca atcgccgtat catgttcatc aggtgttatg
      841 taaggcgtta aagtctatgg cccctcaagt gggtttattt tttgatcttt ttcccgtcat
      901 cggtgaaaca tcgggtattc tgtaaggagt aatatatacg actaaatcta aagcgagaag
      961 ttcgatctaa gtttagaatt gggtttgttt gctgccggag ctatgatatt aacaactgat
     1021 cttgcctagc atatactttg aaaacaagt
//
LOCUS       XM_071832448            1989 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842292), mRNA.
ACCESSION   XM_071832448
VERSION     XM_071832448.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1989
                     /gene="LOC139842292"
                     /note="uncharacterized LOC139842292; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842292"
     CDS             1..1989
                     /gene="LOC139842292"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688549.1"
                     /db_xref="GeneID:139842292"
                     /translation="MSQPNTHFSQGSQLPTWNGGYWVCPPQPQAYGTQNGVNGTNGAP
                     LANNTTDVDNFWKNQKTPFTTGIQNHPLPTGMKIPSHLGYYEGKEDPEDYINVFEGAV
                     RMAKWDMAVVCHAFSYMLKSDARIWFDTLAKDSISSFDELKRYFKSKFSQQKRHKKNH
                     VAAHSIRQKEHEATRTFLSRYTDETHQIAGLPETQRISGLLYGCRARSLVEHLTRDLP
                     DSYEKLLKRAYVWLDAKETAGTFTYEDQSNSKRKEKSSNREERHGKREDKGRYAPYKW
                     ENNAGILGTLIKTPKEILSTEKAAQAFKAPPKLAKKGKPRDTSKFCVFHNDYGHETDE
                     CIQLKLAIEDAVRSGNLSHLVKGIRKTTKASEPVTENKKPKTGKAILAIESCFAVESR
                     RHFKRSRSHQVIDWEEISFPALDTITPSDQPVTISGMIFDRDVHRIYLDSGSSCDIMY
                     EHCFQQLSPAIKARLMPPRVPRVGFSGERCWPIGEIDLDFTIGEPPMTTETLDIVIVQ
                     ANSQHNILLGRMAMMKMGIVVSTIHQLVKFHTSQGIATLPSTYDQSKVIMAIKETMVN
                     PGETILETKEENSHEEKVSINPFFPEQQITIGRQLPSDLKVGLRKLLQSNMDVFAWEY
                     KDMTRIPRTLNILGAEVITEHRLNEYKHLDLIYQKREI"
     misc_feature    346..609
                     /gene="LOC139842292"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1276..1557
                     /gene="LOC139842292"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1321..1323,1327..1329,1333..1335,1414..1422,
                     1546..1548)
                     /gene="LOC139842292"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1321..1329
                     /gene="LOC139842292"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1321..1323
                     /gene="LOC139842292"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1414..1425,1435..1446)
                     /gene="LOC139842292"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgagccaac caaatacgca tttttctcaa ggatcccaac tgccaacttg gaatggcgga
       61 tactgggtgt gtccacccca accacaagcg tatggaacac aaaatggtgt taacggcacc
      121 aacggtgccc ctttagcaaa caacactacg gatgtagaca acttttggaa gaaccagaag
      181 acgcctttca ctacaggcat ccagaaccac ccgttaccca cggggatgaa gataccttcg
      241 cacttgggat actacgaagg gaaggaagat ccggaagatt atatcaatgt attcgaagga
      301 gccgtcagga tggccaaatg ggacatggcc gtggtctgcc atgccttctc atacatgctc
      361 aaaagtgatg cgagaatatg gtttgacact ttagctaaag actcgatatc aagcttcgac
      421 gaactaaagc gatatttcaa gtccaagttt agtcagcaaa agcgtcacaa gaaaaatcat
      481 gttgccgcac acagtattcg acagaaggaa cacgaagcaa ctcgaacttt ccttagtcgg
      541 tacaccgacg aaacccatca aatagctggc ctaccggaga cacagagaat ctcgggcctc
      601 ctgtatggct gcagggcccg ttccctagta gaacatctta ctcgggacct cccggatagc
      661 tacgagaaac ttctcaaaag agcctatgtt tggctagatg cgaaggaaac tgctggaacc
      721 ttcacatacg aagaccaatc taattcaaag cgaaaggaaa agtccagtaa ccgggaagaa
      781 aggcatggga aaagagagga taaaggacgt tatgcccctt acaaatggga aaataacgcc
      841 ggaatcctag gaacactcat aaaaactccg aaggaaatcc tttccacgga aaaggcagca
      901 caagccttca aagcaccacc aaagttggct aagaaaggaa aacccagaga cacaagcaaa
      961 ttctgcgtct tccataatga ctatggtcat gagacagacg aatgcattca gctaaagctt
     1021 gccatcgaag acgcagtaag atcagggaat ctttcgcact tggtgaaagg aattcgaaag
     1081 acaacgaagg cttccgagcc tgttaccgaa aacaaaaagc ctaagacggg aaaagcaatc
     1141 ctagccatag agagttgctt cgcagttgaa tcccgaaggc atttcaaaag aagcagatca
     1201 caccaagtca ttgactggga ggaaatctcc ttccctgcgc tagatactat cacgccttca
     1261 gatcaaccgg tcactatcag cggcatgata ttcgatagag atgtacacag aatctatctc
     1321 gacagcggta gctcgtgtga cattatgtac gaacactgct ttcagcagct cagcccagca
     1381 attaaggcac gattgatgcc accacgagtg ccccgagttg gcttctcagg agaaaggtgc
     1441 tggccgatag gcgaaataga ccttgatttc accattggag agccacctat gacaacagag
     1501 acactagaca tcgttatcgt tcaagcaaat tcacaacaca acattctgct ggggagaatg
     1561 gcaatgatga aaatgggaat cgtagtatcc actatacacc aactagtcaa gtttcataca
     1621 agccaaggga tagctactct cccgtcaacc tatgaccaaa gcaaggtgat catggctatc
     1681 aaagaaacta tggtgaatcc cggagaaact atcctagaaa ccaaagaaga aaactcacat
     1741 gaagaaaagg tatccatcaa ccctttcttc cctgaacagc aaattaccat cggaaggcaa
     1801 ttaccttcgg acttgaaggt gggactacgc aagttacttc aatccaacat ggatgtcttc
     1861 gcctgggaat ataaagatat gacgaggatc ccccgaactc taaatatcct aggggcagaa
     1921 gttataacgg aacacaggct caacgaatac aagcacttag atctcattta ccaaaaaaga
     1981 gaaatttaa
//
LOCUS       XM_071832449             633 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842293), mRNA.
ACCESSION   XM_071832449
VERSION     XM_071832449.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..633
                     /gene="LOC139842293"
                     /note="uncharacterized LOC139842293; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139842293"
     CDS             1..633
                     /gene="LOC139842293"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688550.1"
                     /db_xref="GeneID:139842293"
                     /translation="MTRGRLPGGGGSSIVGKQETRLYEPEERLHSSSRGVKTGAFCSA
                     SRNAMCVQETRWKSEEVVEIKDYKLWYLGSRIAQNGVGIFLGKLHKGNVVDVGRFSDR
                     IMSVSLIIKEETFTVISAYAPHAGLGDAEKKSFWDFLEEVVRGCPADHRLIIGGWSEW
                     THRSGGRRLRGSLWGLWFGPRNEAGRSILEFAIAHELVVANSFFKRGMLS"
     misc_feature    145..>594
                     /gene="LOC139842293"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgacccgtg gccgcctgcc tggtgggggc ggctcctcca ttgtgggtaa acaggaaacc
       61 cgactctacg aaccagagga aaggctgcac agcagtagta ggggcgttaa gactggagct
      121 ttttgtagtg ctagcaggaa tgcaatgtgt gttcaagaga ctagatggaa gagtgaagag
      181 gtggtagaaa ttaaggacta taagttgtgg tacttgggtt ctaggattgc acagaatggg
      241 gtaggtatct ttttaggaaa actacataag ggtaacgttg ttgacgtggg taggtttagc
      301 gataggatta tgtcggttag cttaattatt aaggaggaga ctttcacggt cattagcgca
      361 tacgcacctc atgcgggttt aggtgatgcg gaaaagaaga gtttttggga ttttttagaa
      421 gaggtggtga gggggtgccc agcggaccat cgactgatta taggggggtg gtctgaatgg
      481 acacatagga gtggaggcag aaggttacga gggagcctat gggggctttg gtttggtcct
      541 agaaatgaag cagggcgctc aattcttgag tttgccattg cccacgagtt ggttgtagca
      601 aactctttct tcaaaagagg gatgcttagt tag
//
LOCUS       XM_071832450             477 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842294), mRNA.
ACCESSION   XM_071832450
VERSION     XM_071832450.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..477
                     /gene="LOC139842294"
                     /note="uncharacterized LOC139842294; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842294"
     CDS             1..477
                     /gene="LOC139842294"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688551.1"
                     /db_xref="GeneID:139842294"
                     /translation="MTSTIRDVAKETLRVAKETLGVAIGTSRAHKSRRESWWLSDDVQ
                     TKVALKHRRFREIITFGEGSPAERTRVEERYKEAKREAKKDVAISKGKAYEYLYRKLH
                     SKEGANDIYRIAKARERRSRDLDNIKYIKDVAGKSIVREDLIRTRWEEYFASLFGR"
ORIGIN      
        1 atgacgtcca ctatcagaga tgtggcaaaa gagaccttaa gggtggcaaa agagacctta
       61 ggggtggcaa tagggacatc cagagcccat aagagtagaa gagaatcatg gtggcttagt
      121 gacgatgtcc aaacgaaagt cgcgttaaag cacaggaggt ttagggagat cattaccttt
      181 ggagaagggt cacctgcaga gagaactagg gtggaagaaa gatataaaga agctaaaaga
      241 gaagcaaaga aggacgtagc aatttcaaaa ggcaaagcat acgaatattt atataggaaa
      301 ctacactcta aagagggagc taacgacata tataggatag ccaaagctag ggagcgaaga
      361 agcagggatt tagataacat caaatatatc aaggatgtag cgggtaaaag tatagtgaga
      421 gaagacctta ttaggacaag atgggaagag tattttgcat cccttttcgg tagataa
//
LOCUS       XM_071832451             651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842296), mRNA.
ACCESSION   XM_071832451
VERSION     XM_071832451.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139842296"
                     /note="uncharacterized LOC139842296; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842296"
     CDS             1..651
                     /gene="LOC139842296"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688552.1"
                     /db_xref="GeneID:139842296"
                     /translation="MAKWAIELGEHEISFSPRSAVKGQVLADYLAETTGDIEVSHESK
                     EIPPPPKQLWEMHRDGACGPEGAGAGIVQKSPEGEEYTFALRFSFPVTNSEAEYEALL
                     SGMRVAKYLEVKELSVYVDSQLVANQFNGIFEAHDESMQKYLKLVQELAVDFNLFQIT
                     QVSRTLNKKVDALSKLAALTFSHFKKEIWVEEVKVKSIEEDSVSTAVEEEERSWMM"
     misc_feature    160..534
                     /gene="LOC139842296"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(175..186,274..282,289..291,361..363,481..483,
                     523..525)
                     /gene="LOC139842296"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggccaaat gggctattga attgggagag catgaaataa gtttctcacc acgaagtgcg
       61 gtaaaaggac aagtcctagc agattatctg gctgaaacaa ccggagatat cgaagtctcg
      121 catgaatcga aagaaatacc acctccgccc aaacagctgt gggaaatgca cagagatggg
      181 gcttgtggtc cagaaggcgc aggggcagga atagtccaaa aaagtccaga aggggaagag
      241 tataccttcg cactgcgatt cagcttccct gtcacaaata gtgaagctga atatgaagca
      301 ttgttatctg ggatgcgggt agcaaaatat ctggaggtta aagaactatc agtatatgtt
      361 gattcgcagt tggttgcaaa ccaatttaac ggaatattcg aagcacacga tgagtcgatg
      421 caaaaatact taaagcttgt gcaagagcta gcagtcgact ttaatttatt ccagataact
      481 caggtttcga ggacgctgaa taaaaaggtg gatgcgctaa gtaagttagc cgcattaaca
      541 ttcagtcatt ttaaaaaaga aatttgggtt gaggaagtta aagtaaaatc tattgaagaa
      601 gacagtgttt cgactgcagt tgaagaagaa gagcggagtt ggatgatgtg a
//
LOCUS       XM_071832452            1716 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842297), mRNA.
ACCESSION   XM_071832452
VERSION     XM_071832452.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1716
                     /gene="LOC139842297"
                     /note="uncharacterized LOC139842297; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842297"
     CDS             1..1716
                     /gene="LOC139842297"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688553.1"
                     /db_xref="GeneID:139842297"
                     /translation="MEVASDRMDDVSTPSKLTAATTSLPSGAAELLHPHKLVLGHLFS
                     AQSNIDPSHSYGHLRSCSPVLGAGRPRGVRGGCRVATVGRIRVGSWNIGTLTGKRIEL
                     VDTFLKSKVDIVFSDRIMSVSLIIKEETFTVISAYAPHAGLGDAEKKSFWELLDEVVR
                     GCPADHRLIIGGDLNGHIGVEAEGYEGAHGGFGFGPRNEEGRSILEFAIAHELVVANS
                     FFKKRDAQLATFHSGGRSTQIDFLLLRKGELRTCKDCKVLPALTCSSQHRLLVMDLVT
                     RGRVGRRARAVQPRILWKNLYGANAETFRAIVVNRLSVEEDYVAPTDADQIWNRMAST
                     IRNVAKETLGVAIGTSRAHKSRRESWWLSDDVQSKVALKQTRIAKARERGRRDLGNIK
                     YIKDVAGQSIVRGDLIRKRWEEYFASLFGRGRPEQNGEPHEVQEFQNNCFCTRINQEE
                     VRLALRNMGRNKAVGPDQIPIEAWKCLGGSKATLLCAKTCVKKISGQKRRSSTKASLL
                     CAKSTAPTQKRRSCPPKSAAPIPEAPLLSLIQLENPDYKSIFGFLSEGAASLGRFGAL
                     KGFQS"
     misc_feature    <328..822
                     /gene="LOC139842297"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(409..411,523..525,799..801)
                     /gene="LOC139842297"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atggaggtgg cttcagatag gatggatgat gtgtcaactc catctaagtt gacagccgct
       61 actacctctt tgccgtcggg agccgctgaa ctccttcatc ctcataagct tgtacttggt
      121 catcttttta gtgcacaaag taacatagat ccttcgcata gttatggtca cttgaggtca
      181 tgttctcctg ttttaggggc gggtaggcct agaggggtta gaggaggttg tagggtagcc
      241 accgttggta ggattagagt gggtagttgg aatataggaa ccttgactgg taagaggatt
      301 gagctcgttg atacctttct taagagtaag gtagacatag tgtttagcga taggattatg
      361 tcggttagtt taattattaa ggaggagact ttcacggtca ttagtgcata cgcacctcat
      421 gcgggtttag gtgatgcgga aaagaagagt ttttgggaat tgttagatga ggtggtgagg
      481 gggtgcccag ccgaccatcg actgattata ggtggtgatc tgaatggaca tataggagtg
      541 gaggcagaag gttatgaggg agcccatggt ggctttgggt ttggtcctag aaatgaagag
      601 gggcgctcaa ttcttgagtt tgccattgcc cacgagttgg tggtagcaaa ctctttcttc
      661 aagaagaggg atgctcagtt agccacattc catagcgggg gtcgcagcac ccagattgac
      721 tttttgcttc ttcgtaaagg ggaacttagg acatgtaagg actgtaaggt ccttccagct
      781 ctgacgtgct cctcccagca cagattgctg gtcatggacc tagtcactag gggaagagtt
      841 ggcaggaggg ctagggctgt acaacctaga atcctttgga agaacctata tggagcgaat
      901 gcggagactt ttagagcgat tgttgttaat agattgagtg tagaagagga ttacgttgcc
      961 cctacggacg cagaccagat atggaatcgc atggcgtcca ctatcagaaa tgtggcaaaa
     1021 gagaccttag gagtggctat agggacatcg agagcccata agagtagaag agagtcgtgg
     1081 tggcttagtg acgatgtcca atcgaaagtc gcgttaaagc agacgaggat agccaaagct
     1141 agggagcgag gaaggaggga cttaggtaac atcaaatata tcaaggatgt agcagggcaa
     1201 agtatagtga gaggagacct tattaggaaa agatgggaag aatattttgc atcccttttc
     1261 ggtaggggaa gaccagagca gaacggtgaa ccccacgagg ttcaggagtt tcaaaacaac
     1321 tgtttctgca cgaggattaa tcaggaggaa gttagattgg ccctacgaaa tatggggaga
     1381 aacaaagcag taggaccaga ccaaattccg attgaggcgt ggaagtgcct aggagggtca
     1441 aaagcgacgc tcctatgtgc taaaacgtgt gttaaaaaga tcagtggtca aaagcgtcgc
     1501 tccagcacaa aagcatcgct cctatgtgcc aaaagcaccg ctcctaccca aaagcgccgc
     1561 tcctgtcctc ccaaaagcgc cgctcctatt ccagaagcgc cgctcctgtc gttgattcag
     1621 ctagaaaatc cagactataa aagcatattt gggtttttga gtgagggagc tgcttcctta
     1681 ggccgttttg gagccctaaa agggttccaa tcatga
//
LOCUS       XM_071832453            1110 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842298), mRNA.
ACCESSION   XM_071832453
VERSION     XM_071832453.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139842298"
                     /note="uncharacterized LOC139842298; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842298"
     CDS             1..1110
                     /gene="LOC139842298"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688554.1"
                     /db_xref="GeneID:139842298"
                     /translation="MHANYASKELNVNDTSLRDEQQTRPEQDEQAKQVDKVRGPTVMR
                     KIWKHKPSVRLPISKFDIPPTADSWILLSFECKMKNWRATLKDYYYDASVSMEVQLKS
                     PPLELNKKHWRRLLEYWSRENVMEMSVKNKANMANKKLLQVMGKNHFAIIREELKASL
                     GREPTRVDMFKKCFSNGSGEGEAARAIEQMKELTEKLGDGATDAPGPDDVYAKIMGQH
                     KYGSAETYGLGVHAKDLWGAPGRSAIHKENAQMKAEKAELVDENVRIKAQLAEKQNGS
                     GVQNIDSVVHSSGVQRLKVTRGWLRSLDPRMVVLGIEIGPDWYEVEVQVSINKDEALF
                     RPHDHLVYIHDVIGPNWGCDTIAWPTALIEMVRDD"
     misc_feature    322..687
                     /gene="LOC139842298"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
     misc_feature    871..1035
                     /gene="LOC139842298"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
ORIGIN      
        1 atgcatgcca attatgcgag taaagaatta aatgtgaatg atacaagttt gagagatgag
       61 cagcaaacca gaccagagca agatgaacaa gctaaacaag tcgacaaagt tagaggaccg
      121 acagttatgc gaaaaatttg gaaacataag ccatctgttc gacttcctat ttcaaagttt
      181 gatattccac caactgctga ttcttggata ctcctgtcat ttgagtgcaa aatgaaaaat
      241 tggagggcga cactgaagga ctattactat gatgcgtctg tatcaatgga ggttcaatta
      301 aagtcaccac ctctagaact caacaaaaaa cattggagac gacttcttga atattggagt
      361 agagaaaatg tgatggagat gagcgtaaaa aataaagcta atatggctaa caagaagttg
      421 ctgcaagtga tggggaaaaa ccattttgca ataattcgtg aagaactgaa ggcgagtttg
      481 ggaagagaac caactagggt ggatatgttt aagaagtgtt tttcaaatgg aagtggtgaa
      541 ggtgaagctg ctcgtgcaat tgaacaaatg aaagaactca ctgagaaact aggtgatggt
      601 gcaactgatg cacctggacc agatgatgtt tatgccaaga taatgggtca acataaatat
      661 ggttctgccg aaacgtatgg actgggtgtt catgccaaag atttgtgggg tgcacctggt
      721 cgatcagcta ttcacaaaga gaatgctcag atgaaggccg aaaaagcaga acttgttgat
      781 gaaaatgtta ggataaaagc tcagttggca gaaaagcaga atggttcggg tgtgcagaat
      841 attgattcgg ttgttcattc ttcgggtgtt caacgtttaa aggtaacaag aggatggttg
      901 aggagcctgg atccaagaat ggttgttttg gggatagaaa ttggacctga ttggtatgag
      961 gtcgaggttc aagtgtccat aaataaagat gaagctttgt ttaggccaca tgatcatttg
     1021 gtgtacattc atgacgtcat tggccctaac tgggggtgtg atactattgc ttggcctact
     1081 gcgttaattg agatggtacg tgatgattga
//
LOCUS       XM_071832454             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842300), mRNA.
ACCESSION   XM_071832454
VERSION     XM_071832454.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139842300"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842300"
     CDS             1..603
                     /gene="LOC139842300"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688555.1"
                     /db_xref="GeneID:139842300"
                     /translation="MTCTRPDIAYAVGKLSRFTSNPVSHHWKAVNRVFKYLRQTKDFG
                     ITYTGFPSILEGYSDASWITNMEDHSSTTGWIFLLAGGVISWASKKQTCIINSTMESE
                     FVALAATGNEVKWLRNLVYEIPLWPKPVPPIGMHCDSASTVAKAYSHMYNGKSRHLGV
                     RHSMVRELNTNGVISIDFVRSEQNLADHLTKGLARDSVHK"
     misc_feature    163..588
                     /gene="LOC139842300"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(175..186,289..297,304..306,412..414,490..492,
                     571..573)
                     /gene="LOC139842300"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgacttgca ctagaccgga tattgcctat gcggtgggta aattgagtag atttactagt
       61 aacccggttt ctcaccattg gaaagctgtg aatagagtat ttaagtactt gaggcaaacc
      121 aaggactttg gtatcacata taccggcttc ccttctatcc tagaaggtta ttcggatgca
      181 agttggataa ctaatatgga agatcattct tctactactg gttggatatt cctacttgct
      241 ggaggggtaa tttcatgggc ttccaagaag caaacatgta ttataaattc gacaatggag
      301 tcggaatttg ttgcattggc tgcgacgggt aatgaagtca agtggttaag gaatttggta
      361 tatgaaattc ctttgtggcc aaagcccgtt cctcctattg gtatgcattg tgatagtgct
      421 tcaacggtgg ctaaggctta tagtcacatg tataatggta agtctagaca cttgggtgtt
      481 agacattcca tggtacgtga attaaacacg aatggagtga tctccattga ttttgttaga
      541 tcggaacaaa atctagcgga tcacttgacc aagggactag ccagggactc ggtgcacaag
      601 tag
//
LOCUS       XM_071832455             597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842301), mRNA.
ACCESSION   XM_071832455
VERSION     XM_071832455.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..597
                     /gene="LOC139842301"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139842301"
     CDS             1..597
                     /gene="LOC139842301"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688556.1"
                     /db_xref="GeneID:139842301"
                     /translation="MSKKYKMSNLCKLNHFLGLQVKQSPEGIFINQSTYVLNLIKKYG
                     FRNCSTLKTPMSVSEKLSKDESRKSVCEKTYRGMIGSLLYLTASKLDIMFATCLCARY
                     QADPKDSHYKAVKRIFRYLKGTPNLGLWYPKGSGFDLIRYTDVDYAGCKLDRKSTSGG
                     CQLLGGKLVSCSSKTQNSVATTTAEAEYVAAGGCCAQL"
     misc_feature    <1..165
                     /gene="LOC139842301"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    424..>594
                     /gene="LOC139842301"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtctaaaa agtacaaaat gagtaacttg tgcaagctaa atcacttttt gggtttacaa
       61 gtcaaacaaa gtcctgaagg aatttttata aaccagagca cttatgtttt gaacttaatt
      121 aaaaaatatg gttttagaaa ttgttccacc ttaaaaactc ctatgagtgt gtctgagaaa
      181 ttgagtaaag atgaatctag aaaatctgta tgtgaaaaga cttacagggg aatgattggt
      241 tcattattat acctaactgc tagcaaactt gatatcatgt ttgctacatg tttatgtgca
      301 agatatcagg cagacccaaa agactctcat tataaggctg ttaaaagaat tttcaggtac
      361 ttaaaaggca ctcctaattt aggtctgtgg taccccaaag gttctggttt tgatctcatt
      421 aggtatacag atgttgacta tgcagggtgt aaattggata gaaaaagcac ttctggtggt
      481 tgtcaattat tgggtggaaa attggttagt tgttcaagta aaacgcaaaa ttctgttgct
      541 actacaactg cagaggctga gtatgttgct gctggtggat gttgtgctca attgtaa
//
LOCUS       XM_071832456             519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842302), mRNA.
ACCESSION   XM_071832456
VERSION     XM_071832456.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..519
                     /gene="LOC139842302"
                     /note="uncharacterized LOC139842302; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842302"
     CDS             1..519
                     /gene="LOC139842302"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688557.1"
                     /db_xref="GeneID:139842302"
                     /translation="MEVSNVNNGGMVNGMEKLVGKNYKYWKMCMEAFLQGHDLWELVS
                     GGEAIIPIETLENVESRRKWKVRCGKALFALRTSISKEFIEHVRDTTSPKELWDTLEK
                     LFSKKNTARLQFLENELAISRQEGMSVSEYFLRVKNLCSEISEIDDKEKISEARLRIY
                     LIRGLKKEYSRS"
     misc_feature    52..132
                     /gene="LOC139842302"
                     /note="Domain of unknown function (DUF4219); Region:
                     DUF4219; pfam13961"
                     /db_xref="CDD:433608"
     misc_feature    220..>510
                     /gene="LOC139842302"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggaagtct caaatgtaaa caatggtggt atggtcaatg gaatggagaa acttgtaggc
       61 aaaaactaca agtattggaa gatgtgtatg gaggcttttc ttcaaggtca tgatctatgg
      121 gaacttgtgt ccggaggtga agccataatt cccatagaaa ctctagagaa tgtagagtca
      181 agaagaaaat ggaaggtacg atgtggaaag gctctctttg cattgagaac ttcaattagc
      241 aaagagttca ttgaacacgt tcgtgatact acttctccaa aagaattatg ggatactctt
      301 gagaaactat tttctaagaa aaacaccgca aggttgcaat tcttggaaaa cgagttagca
      361 atctcaagac aagaaggtat gagtgtttcc gaatatttct tacgggtcaa aaatctatgt
      421 tctgaaattt cagagattga tgacaaagag aaaattagtg aagctcgttt gcgaatatat
      481 ctaattcgcg gtttgaagaa agagtattcc cgttcataa
//
LOCUS       XM_071832457             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc-finger homeodomain
            protein 11-like (LOC139842303), mRNA.
ACCESSION   XM_071832457
VERSION     XM_071832457.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139842303"
                     /note="zinc-finger homeodomain protein 11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139842303"
     CDS             1..837
                     /gene="LOC139842303"
                     /codon_start=1
                     /product="zinc-finger homeodomain protein 11-like"
                     /protein_id="XP_071688558.1"
                     /db_xref="GeneID:139842303"
                     /translation="MDLKNHTTTTVVVTADSPDTDDVETPLHSQLVIKPFSDVKNHHH
                     QPPSTVVVAYKECLKNHAASIGSHALDGCGEYMTSPGSLKCAVCGCHRNFHRREPINN
                     VYACAPHVMLSLTQNDHHHHHHQINHVVASPRTPAAIKIEHPNNGRKRFRTRFSQDQK
                     EKMSDFAEKLGWKMQRCDDKKVVDFCDEIGIRRGIFKVWMHNNKNTLGKKDKDLTIIS
                     PTTAAGANISGGVVDQSHEEDVIDVNGGDHNNNNNNSSDDQENGGHDHVQVSTNRSSC
                     SC"
     misc_feature    151..300
                     /gene="LOC139842303"
                     /note="ZF-HD protein dimerization region; Region:
                     ZF-HD_dimer; pfam04770"
                     /db_xref="CDD:398439"
     misc_feature    442..612
                     /gene="LOC139842303"
                     /note="homeobox domain, ZF-HD class; Region: homeo_ZF_HD;
                     TIGR01565"
                     /db_xref="CDD:130628"
ORIGIN      
        1 atggacctca aaaaccacac caccaccacc gtcgtcgtta ccgccgatag cccagacacc
       61 gacgacgttg aaaccccact tcattcacaa ttagtaatca aacccttttc agatgttaaa
      121 aaccaccacc accaaccacc gtctacggtg gtggtagcat acaaagaatg tctcaaaaac
      181 catgcagcca gcatcggcag ccacgcattg gacggctgcg gtgagtacat gacgtcacca
      241 ggttcactaa agtgcgccgt atgtgggtgc caccgcaact tccaccgccg tgagcctatc
      301 aacaacgtgt acgcatgtgc acctcacgtg atgttatcac tcacacaaaa tgatcatcat
      361 catcatcatc atcaaattaa ccacgtggtg gcatcaccga ggactccagc cgcaatcaag
      421 attgaacacc ctaataatgg taggaaaaga ttccgtacaa gattcagtca agatcaaaag
      481 gaaaaaatga gtgattttgc agagaaatta gggtggaaaa tgcaaagatg tgatgataaa
      541 aaggtggtgg atttttgtga tgagattgga ataagaagag ggatatttaa agtatggatg
      601 cataataata agaatacttt gggtaagaaa gataaagatc tgacaattat atctccgact
      661 accgctgccg gagctaatat aagcggtgga gtagttgatc agtctcatga ggaggatgtt
      721 attgatgtta atggaggtga tcataataat aataataata atagtagtga tgatcaagaa
      781 aatggtggtc atgatcatgt tcaagtttct actaatagat cttcttgttc atgttga
//
LOCUS       XM_071832458             831 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842305), mRNA.
ACCESSION   XM_071832458
VERSION     XM_071832458.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..831
                     /gene="LOC139842305"
                     /note="uncharacterized LOC139842305; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842305"
     CDS             1..831
                     /gene="LOC139842305"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688559.1"
                     /db_xref="GeneID:139842305"
                     /translation="MAVERGMYKGVEVGNASFKDRFKRLYRLEIDKDINISNKIEEFK
                     GDGLSNWAYPPMGRTNSELIELRDTVRNLQLVEDKKDCWNWNLNSKGTYTVKDCSVLV
                     DKVILPRAVNSIESLRNGLVPKKVEVFIWRARLGRLPVRFELDKRGIDLNSVRCPICD
                     GNIETVEHILFSCQMAKDIWAKVLKWWGYNSALFGYEDIFNGTFGYVAHDHKRNQWQA
                     VCWVVCYILWKNRNAKVFKNKLETVPSLFNEVQVLSYDWISRHCKGHIMDWLQWFSHP
                     "
     misc_feature    <364..537
                     /gene="LOC139842305"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcggttg agagagggat gtataaaggg gtggaggtgg ggaacgcaag cttcaaagac
       61 agattcaaaa gattatacag gctcgagatt gacaaagata tcaacatcag taacaaaatt
      121 gaagaattta agggagatgg gctcagcaat tgggcctatc cacctatggg ccgaacgaat
      181 agtgaactaa ttgagttgcg agatactgtt cgaaacttgc agctggtcga agataaaaaa
      241 gactgttgga actggaatct caattcgaag ggtacatata cggtcaaaga ctgttcggtt
      301 ctagtggaca aagtcatcct accacgtgcg gttaattcaa ttgagtcgtt gcgaaatggt
      361 ttggttccaa aaaaagtaga ggtgtttatt tggcgggcga gattaggtcg tctaccggta
      421 aggttcgagt tagataaacg gggcatcgat ttgaacagcg tgagatgtcc gatttgtgat
      481 ggtaacattg agacggtgga gcatatactt ttttcttgtc aaatggcaaa agacatatgg
      541 gctaaagtcc ttaaatggtg ggggtataat tcggctttat tcgggtatga ggatattttt
      601 aatggtacct tcggctacgt agcacatgat cacaaaagga accaatggca agcggtttgt
      661 tgggtggttt gctacattct atggaagaat agaaatgcaa aggtgttcaa gaataagctc
      721 gagacggtac catctttatt taacgaggtt caagttcttt catacgattg gatttcacga
      781 cattgcaagg gtcatattat ggattggctt caatggttct cacaccctta g
//
LOCUS       XM_071832459             714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides meiosis-specific protein
            ASY1-like (LOC139842306), mRNA.
ACCESSION   XM_071832459
VERSION     XM_071832459.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139842306"
                     /note="meiosis-specific protein ASY1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139842306"
     CDS             367..714
                     /gene="LOC139842306"
                     /codon_start=1
                     /product="meiosis-specific protein ASY1-like"
                     /protein_id="XP_071688560.1"
                     /db_xref="GeneID:139842306"
                     /translation="MKKSLITLQEPEYEFEAVKEEADHLVNISKKSSPTASELHMYMK
                     ALHHVLPMNYITISILQSMFGGEANQNIVRKLIDKMTKEEYIESTNNYRLGNAHIEIF
                     SSIINSSFLFTMN"
ORIGIN      
        1 gattaacaca acaaataaca aaggaagggt agtatagtca ttttacatat tttaaacaaa
       61 aatacattac agatctcaaa ttacagatcg agatctgaga acgatgatgg cgattgaaac
      121 cctaaaccct acaaatcgtt cactctgatt gctttaaaac ttccggcgaa ttgcgtaatc
      181 acatcgttag atcacgtaat cttcatacac tcggtcgatt tgcttgatat tcgttcacac
      241 cggcaaaggc ttgatattcg tttcactcca gccaatcaaa ttgtccaatc aattaatcaa
      301 tggaagcaga atacgaatca atggagccag aaaacgaatc aattgaacca gaatacgaga
      361 tcagtgatga agaaatcatt aataacgcta caggagccag agtatgaatt tgaagctgtg
      421 aaagaggaag ctgatcacct tgttaacatc agcaagaaaa gttcacccac tgcaagtgaa
      481 cttcatatgt acatgaaagc acttcatcac gttcttccaa tgaactacat tactatttct
      541 atacttcaaa gcatgtttgg tggagaggct aatcaaaata ttgttcgcaa gctaatcgat
      601 aaaatgacaa aagaagaata tattgaatcc actaacaact ataggctagg taatgctcat
      661 attgaaattt ttagttccat aattaattct tcatttctgt ttaccatgaa ctag
//
LOCUS       XM_071832460            1026 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842308), mRNA.
ACCESSION   XM_071832460
VERSION     XM_071832460.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1026
                     /gene="LOC139842308"
                     /note="uncharacterized LOC139842308; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842308"
     CDS             1..1026
                     /gene="LOC139842308"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688561.1"
                     /db_xref="GeneID:139842308"
                     /translation="MGKCFKYFRERGGLNIGSLKAKNLALLGKWRWRFKTETNAFWVK
                     IIRSIYGSDGGLLVEGDSLHSSPIGLWNNIIASGVAMNELQVPFTHSFIKTIGDGDST
                     SFWQEHWIGSDKLCKLFPRLYRLELNQFATVKDRCSRINNELIVNWNWSRNPSGRTCD
                     ELHNLTNLLIAFECNSNNSDSWKWAFASNETFTVKQLSCLLDEHLLGQYSTNQKTFRN
                     NLVPKKVEIFIWRALKGRLPVKVELDKRGIDLHSVRCPLCDDNLESVEHALISCKCVE
                     DIWSRVYKWWNAGSFVPSNIMNVLGDDKPSTSTKFGGNLWQATRWISAYLIWKNRNNL
                     DRSDGSK"
     misc_feature    <652..822
                     /gene="LOC139842308"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggaaaat gttttaaata ctttcgggaa cggggggggc taaatattgg gtctttaaaa
       61 gctaaaaatc tcgcgctatt gggaaaatgg cggtggaggt ttaaaaccga aaccaatgct
      121 ttttgggtca aaatcatacg tagtatttat gggtcagacg gcggtttatt ggttgagggt
      181 gattcgcttc actcttcgcc aataggtctc tggaataaca taattgctag tggtgttgct
      241 atgaacgagt tacaggtacc cttcacgcac tcatttatca agacaattgg ggatggtgac
      301 tctacatctt tctggcaaga acactggatc ggatcagaca agctatgcaa gctgtttccg
      361 cggctttaca gattggagct gaatcaattc gcaacagtaa aagaccgctg cagcagaatc
      421 aacaatgagc tgatcgtaaa ctggaattgg tcccgaaatc cttctggaag gacctgtgac
      481 gaactgcata acctaaccaa tcttctgatc gcgttcgagt gtaacagcaa caattcggat
      541 tcctggaaat gggcgtttgc ttcgaatgaa acctttacag ttaaacaact ctcgtgccta
      601 ctagacgaac atttacttgg tcagtattct acgaatcaaa aaacttttcg taataacctt
      661 gttccaaaaa aggttgaaat ttttatttgg agagctctca aaggaagatt acccgtcaaa
      721 gttgaacttg ataaaagggg catcgatctt cattcggtga gatgcccact ttgtgatgat
      781 aatttagaat cggtcgaaca tgcgcttatt tcttgtaaat gtgtggaaga tatttggtcc
      841 cgagtttata aatggtggaa tgctggatcc tttgtacctt caaacattat gaacgtctta
      901 ggagatgaca aaccatctac atctactaaa tttggcggaa atttgtggca agctactaga
      961 tggataagtg cgtatcttat ttggaaaaat cgaaacaatt tggaccgctc cgatggctct
     1021 aaatga
//
LOCUS       XM_071832461            1724 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein SKIP19-like
            (LOC139842309), mRNA.
ACCESSION   XM_071832461
VERSION     XM_071832461.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1724
                     /gene="LOC139842309"
                     /note="F-box protein SKIP19-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842309"
     CDS             22..1386
                     /gene="LOC139842309"
                     /codon_start=1
                     /product="F-box protein SKIP19-like"
                     /protein_id="XP_071688562.1"
                     /db_xref="GeneID:139842309"
                     /translation="MMNKNKNKNKICSWNDDDEKELRETIRIGKLIGFQFDPSHENHL
                     RESMKADKAKSTKASTSKSNRRKEKPTGFQFEPAHEHNIRETMKADQASKASTSKSKP
                     RKGKKSKFVSKPKQIWQVKKPTANWLELPTDLTANILQRIGMFDILNNAEKVCTTWRK
                     ICKDPAMWRVISMDNPSDPNGRPVCQEICKHVVDRSQGQLVDLSITDFCTDELLIYIS
                     DRASQLKRLEVVYCFGEMYGEWGVYLKKFPLLEELSLETTEIGPEDIEAVGRYCPLLK
                     TLKLNQKFYKWSTIDDDEEHVQMLNETAIAIGKNLHDLRHLQLIGDMMTNTGLQAILD
                     GCTRLESLDMRQCLYIDLKKDDMGKRCSERIKDVKLPNDDMEGYMHLVKNDYDDFVES
                     NVSSESGLFFGDSDDDYYGRRYYDSDGYEYDDYTRCDAFDEDGDFSDFEDMNAMMAFF
                     SMFK"
     misc_feature    397..534
                     /gene="LOC139842309"
                     /note="F-box domain found in Arabidopsis thaliana
                     SKP1-interacting partner 19 (AtSKIP19) and similar
                     proteins; Region: F-box_AtSKIP19-like; cd22164"
                     /db_xref="CDD:438935"
     misc_feature    order(409..411,421..423,430..435,442..447,457..459,
                     463..468,481..489,493..495)
                     /gene="LOC139842309"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438935"
     misc_feature    619..690
                     /gene="LOC139842309"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    691..768
                     /gene="LOC139842309"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    769..843
                     /gene="LOC139842309"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    844..960
                     /gene="LOC139842309"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    961..1035
                     /gene="LOC139842309"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 tgtgtacatt ttggggatga aatgatgaat aaaaataaaa ataaaaataa aatttgtagt
       61 tggaacgatg acgatgaaaa agaactccgt gaaacgatta ggatcggaaa acttatcggc
      121 ttccaatttg atccatctca cgaaaatcat ctcagagaat cgatgaaagc tgataaagct
      181 aaatcgacaa aggcatcaac gtctaaatca aatcgacgta aagaaaaacc tactggcttc
      241 caattcgagc cagctcatga acataatatc agagaaacaa tgaaagctga ccaagcgtca
      301 aaggcgtcaa catcaaaatc gaagccacga aaaggaaaga aatcaaagtt tgtttccaaa
      361 cccaaacaga tttggcaagt gaagaaacca actgcaaatt ggttagagct accaacagat
      421 ttaactgcca atatactcca aagaattggt atgtttgata tacttaataa tgctgaaaaa
      481 gtttgtacaa cttggcgaaa aatatgcaag gaccctgcta tgtggagggt tatttcaatg
      541 gacaaccctt cagatccgaa tggtaggcca gtatgtcaag agatatgtaa gcatgttgtc
      601 gatagaagcc aaggccaatt ggttgatctt tctatcactg atttttgcac tgatgagctt
      661 cttatataca tctctgatag agcaagtcag ctaaaacgtc ttgaagtagt ttattgtttt
      721 ggtgaaatgt atggagagtg gggtgtttat cttaagaaat ttccgttatt ggaggaactc
      781 agtttggaga caacagagat tgggcctgaa gatatcgaag ctgttggacg ttattgcccg
      841 ttgctaaaaa cactcaaatt gaatcaaaag ttttataaat ggtcaacaat agatgatgac
      901 gaggagcatg tgcagatgct gaacgagacg gccattgcga ttggtaagaa tttgcatgat
      961 ttaaggcacc ttcaactcat tggagacatg atgacgaata ccggtttgca agcgattttg
     1021 gatggttgta ctcgtctcga gtcccttgac atgcgtcagt gcttgtacat tgatcttaaa
     1081 aaagacgaca tgggaaaaag atgttcagaa aggattaaag atgttaaact ccctaatgat
     1141 gatatggaag ggtatatgca tcttgttaag aatgattatg atgatttcgt ggagagtaac
     1201 gtttcttctg aatctgggtt attttttggt gattctgatg atgattatta tggtcgtcga
     1261 tattatgact cggatggcta tgagtatgat gattatactc gatgtgatgc atttgatgaa
     1321 gatggcgatt tcagtgactt tgaggatatg aatgccatga tggctttctt ctctatgttt
     1381 aaatagagta ttattctttg cgataaaagg tgagacgtta ctactgattt agctttgaat
     1441 gttaagtttc cacttgagat tttaatgtat ttcatctttt tgttttattg gttcagttgc
     1501 tgtctttctt tatgggtttg gtaggcatgg ttaatttgag tattatgttg atagtttttt
     1561 gaagtttaaa gtgtctgctt agtgcttact attgctaaac aaaggatatt gatctgcact
     1621 agatcttcta gattcaagtt tcatcactat cctgattcct gagcttgaat tccaaaatga
     1681 tggatcaaat gtatgaatag tatattagta atgcacattt gttt
//
LOCUS       XM_071832462            1855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842310), mRNA.
ACCESSION   XM_071832462
VERSION     XM_071832462.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1855
                     /gene="LOC139842310"
                     /note="uncharacterized LOC139842310; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842310"
     CDS             126..1724
                     /gene="LOC139842310"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688563.1"
                     /db_xref="GeneID:139842310"
                     /translation="MSIAVSQGFACRSHLSFQLPLINRLHKVRQSFTVDATESPVESV
                     SVHNDGFQISTARIVKGGADDCKPHEWKKLSSKELGIRTSRITTPAKTVLNVLKKKGY
                     EVYLVGGCVRDLILKKTPKDFDILTSAELKEVMKAFPRCEIVGRRFPICHVHVDDIIV
                     EVSSFSTSERKFGRKSKPMLRKPYGCNECDYIRWNNCMQRDFTINGLMFDPFARIVYD
                     YIGGMEDIRRAKVRCITPANTSFVEDCARILRGIRIAARLGFRFSRETSNSVKELSNS
                     LLRLDKGRIHMEMNYMLAYGSAEASLRLLWKFGLLEILLPMQAAYLVSLGFRRRDKRS
                     NMLLSLFASLDKLLAPDRPCHSCLWVGILAFHEALVDQPRDALVIAAFCIAVHGGGSL
                     SEAVNIARDISQPHDTSFHEISEPVYAYSKDELIDEVMELADSVKAALHRLRDENLVS
                     EALIQYPQAPQSDLVFISWALSLKVCSMFDCVRKGRNRRSVLKRGGEIDYESLALGRL
                     EEVRHIFGRVVFDTVYPTRLTRHD"
     misc_feature    378..>1103
                     /gene="LOC139842310"
                     /note="tRNA nucleotidyltransferase/poly(A) polymerase
                     [Translation, ribosomal structure and biogenesis]; Region:
                     PcnB; COG0617"
                     /db_xref="CDD:440382"
     polyA_site      1855
                     /gene="LOC139842310"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttatcttca tcgtctatga tcttgattgc tatcaaatca aagattccct aatttgaaac
       61 cctaatttct gacctaattt caactacata aaattctggt atgcgcaaac ctcacagatt
      121 taccaatgtc aattgctgta tctcaaggat ttgcttgtag aagtcattta tcattccaac
      181 tccctctcat caatcgtctc cacaaggtaa ggcaaagctt tacagtagat gctactgaat
      241 caccggttga atcagtaagt gttcataatg atggatttca gatttcaact gctagaattg
      301 taaaaggagg tgctgacgat tgcaaaccgc acgagtggaa aaaattgagc tctaaagaac
      361 ttggaatcag gacttcaaga attactacac ctgcaaaaac ggttctaaat gtgcttaaga
      421 aaaagggata tgaggtgtat cttgttggag gttgtgtacg ggatcttatt ttaaaaaaaa
      481 ctcctaaaga tttcgacatc ttaacctcag ctgaacttaa agaggtaatg aaagcctttc
      541 ctcgatgcga aatagttggg agacgatttc ctatatgcca tgtacatgta gatgacatca
      601 ttgtagaggt ttcgagtttc agcacaagtg aaaggaagtt tgggaggaag tcaaaaccca
      661 tgttgagaaa gccttatggg tgtaatgaat gtgattatat tcgatggaat aattgcatgc
      721 agagggattt tacaattaat gggttgatgt ttgatccatt tgcaaggatc gtctatgatt
      781 atattggtgg aatggaagac atccgaaggg ctaaagttcg ttgcataacc cctgcaaaca
      841 cttcctttgt ggaagattgt gctcgcattc tgcgtgggat tagaattgct gcccgattag
      901 ggtttcggtt ttccagagag acttctaatt ctgtgaaaga attgtccaat tctttgttaa
      961 ggcttgataa gggccgaata catatggaaa tgaattatat gctggcgtat ggatccgccg
     1021 aggcttcact aaggttactt tggaaatttg gactccttga gattcttctg cccatgcaag
     1081 cagcatacct tgtttcactt ggattccgca gacgcgataa gagatctaat atgctcctgt
     1141 ctttgtttgc cagcttggat aaacttttag cacctgatcg tccatgccat tcttgcttgt
     1201 gggttggtat tctagcattt catgaggctt tggtagacca acctcgcgat gctctggtga
     1261 ttgctgcgtt ttgcatagca gttcatggtg gcggatcgtt gtccgaagcg gtaaatattg
     1321 cacgggatat atcacaacct catgacacga gcttccatga aatatcggaa cctgtttacg
     1381 catattcaaa agatgagtta atagacgagg ttatggaact tgcagattca gtaaaagctg
     1441 cattgcatag gctgagagac gagaatttag tttcagaggc cctgatccaa tacccccaag
     1501 ctccacagtc ggatctggta ttcatttcgt gggcgctatc gctaaaggtg tgctccatgt
     1561 ttgactgtgt tagaaagggg aggaatcgga ggtctgtact aaaacgagga ggtgaaattg
     1621 attatgaatc gttagcgttg ggtagattgg aggaagtaag gcatattttt ggtagagttg
     1681 tttttgacac tgtttaccct acaagattaa ctaggcacga ttaacttttt ttatttttta
     1741 ggacccggat ttgttctata tttatctatt tttttcgtgg cattatctca cgggtataac
     1801 ttgtatcaac atgttccata aggattcaaa ttgaaaatat tgtgctctcg attta
//
LOCUS       XM_071832463             384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842312), mRNA.
ACCESSION   XM_071832463
VERSION     XM_071832463.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..384
                     /gene="LOC139842312"
                     /note="uncharacterized LOC139842312; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842312"
     CDS             1..384
                     /gene="LOC139842312"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688564.1"
                     /db_xref="GeneID:139842312"
                     /translation="MAFKKPLETTPFRLIYGKEYHLPVEVEHRVYWALKNVNMDIEKA
                     ERKEFEPGQKVLLYNSRFKFSPGKLRSRCSGPFVVKQAFPAGHVELIGRDGEHFKVNG
                     HWLKLYYEGFNETEKEVLTFYSEGT"
ORIGIN      
        1 atggcattca aaaagcctct cgaaaccaca ccgtttcgac tcatttatgg taaagagtat
       61 catcttccgg tagaggtgga gcacagagtt tattgggcat tgaaaaatgt taatatggat
      121 attgaaaagg cagaaagaaa ggagtttgaa cctggtcaaa aagtcttact ttataattca
      181 cggttcaaat tttcgccggg aaaacttagg tcccgatgct ctggtccatt tgtggtcaaa
      241 caagcttttc cggcaggtca tgttgagtta attggaaggg atggagaaca tttcaaggtg
      301 aatggtcatt ggttgaagtt atactatgag ggattcaatg aaaccgagaa ggaggtcctt
      361 accttttact ctgagggaac gtga
//
LOCUS       XM_071832465             657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842313), mRNA.
ACCESSION   XM_071832465
VERSION     XM_071832465.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..657
                     /gene="LOC139842313"
                     /note="uncharacterized LOC139842313; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842313"
     CDS             1..657
                     /gene="LOC139842313"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688566.1"
                     /db_xref="GeneID:139842313"
                     /translation="MKLLQDFKFGYRDTDSWKCNFQTNGLFSLSRLKLLIDEKLLPNS
                     LTAYETERNNLMPQKIGVFIWRVRQNRIPVRTKLEKRGIDLDSLRCPVCDNDIETVDH
                     ILLHCSFAKDVWNMVYRWWNIGNMSHLNLERMFCGIKYLNRPNISSKVWQAIEWFTGY
                     SIWLNRNQTIFRKKKGIGPTVLNEIQIKTFEWISKRSWKFKLEWSQWLINPSSFDEHG
                     "
     misc_feature    <157..339
                     /gene="LOC139842313"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaagctgc tgcaagattt taagtttgga tacagagata ctgactcttg gaagtgtaac
       61 tttcaaacta atggtttatt ttctttatct agacttaagc ttttaattga tgaaaaactt
      121 ctgccaaact ccttaacagc ttacgaaact gaacgaaaca atcttatgcc acaaaaaatt
      181 ggtgttttta tatggcgtgt tcgtcaaaac agaataccgg tgcgtactaa attggaaaaa
      241 cgtggcatcg atcttgactc tttgagatgc cctgtctgtg acaatgatat cgaaactgtc
      301 gatcatattt tgctacactg ctcattcgcc aaagacgtgt ggaatatggt gtatcggtgg
      361 tggaatatag gcaacatgtc tcatctcaac ttggaaagaa tgttctgtgg aatcaaatat
      421 ttaaatagac cgaacatttc ttcaaaagtg tggcaagcaa ttgaatggtt tactgggtat
      481 tcgatttggc tcaatcggaa tcagaccata tttagaaaga aaaagggaat tggtccaacg
      541 gtgcttaatg agattcaaat caaaacgttt gaatggattt caaagcgatc atggaagttc
      601 aagttagaat ggagtcaatg gttaatcaac ccaagctctt tcgatgagca tggttga
//
LOCUS       XM_071832466            2436 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842314), mRNA.
ACCESSION   XM_071832466
VERSION     XM_071832466.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2436
                     /gene="LOC139842314"
                     /note="uncharacterized LOC139842314; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842314"
     CDS             1..2436
                     /gene="LOC139842314"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688567.1"
                     /db_xref="GeneID:139842314"
                     /translation="MVRMLLGREEMDRNTWMYEIGRATSEFMDSVDEFITVAETDQLE
                     KGNTAISCPCKKCKNARWYADSTDIKSHLIAHGFMRGYTCWSFHGESLADLNPSGSDN
                     DTDNEDDSYNSGNNVNFDDMFDDLDMEDNVADKYHDRLQQLFVDAEKPLYTGCMNFSK
                     LSAVIQLVNLKSNNGWSDTSFTSLLELLNKLLPEGNELPVSTYQAKKLMCPMGLEIQR
                     IHACPNDCMLYRNEDKDLHQCKVCGTSRYKRGKPTDNVDSDVSENGPPAKLLWYLPII
                     PRLKRLFANEKDEKLLRWHAEDRKNDGKMRHVADSLQWKNFDKDFEEFGDKIRNIRFR
                     LSSDGINLFGDLSSRHSTWPVLLCIYNLPPWLCMKRKYIMMSLLIQGPKEPGNDIDVY
                     LQPLVDEMMELWSTGIHVYDAYKKEYFQLRAMLFCTINDFPAYGNLSGYSTKGKKACP
                     IYEENTHSIWLTNCKKPAFMGHRRELAENHPYRKKADLFDGTIEDRKLPAPLDGETTL
                     SKVANIKVVWGKKGFGPPKGIWKKKSIFWKLPYWKHLRVRHCIDVMHFEKNVCESLIG
                     LLLNIPGKIKDGIKVRRDMELMNIRPELQPKDIDGRTGYDILRGIKVPSGYSANIRKL
                     VSMKDLKLLGMKSHDCHVIDPDVLDEYQRDIILTLCELEIYFPPSFFDVMVHLVSHIV
                     GEIKACGPVFLCVGIPQSHHEGRLAGQGTLGRKTGYSNVADYQEAHFNVLQHTTSIDP
                     FIQEHMAFLRQQNPKKRAKWLANQHKITFSEWLKDKVRRTLPNIDKTIEALGFVPKHV
                     FQYQGYDINRYTF"
     misc_feature    43..270
                     /gene="LOC139842314"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    904..1536
                     /gene="LOC139842314"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1921..>2073
                     /gene="LOC139842314"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
ORIGIN      
        1 atggttagga tgttgcttgg tagagaggag atggatcgga atacttggat gtacgagata
       61 ggtcgcgcta cctctgagtt tatggatagt gtagatgaat ttattacagt tgctgagact
      121 gatcaactag aaaaaggaaa caccgcaatt agttgtcctt gtaagaaatg caaaaatgca
      181 cggtggtatg ctgattcaac cgatattaaa agtcatctaa ttgcacacgg atttatgaga
      241 gggtacacat gttggtcttt tcatggtgag tcattagctg accttaaccc gtctggttcg
      301 gataacgata ccgataatga agacgattca tacaatagtg gcaataatgt taattttgat
      361 gacatgtttg acgatttgga tatggaggat aatgttgctg ataagtatca tgacagatta
      421 caacaactat ttgttgacgc tgaaaaacct ttatataccg gttgtatgaa tttttcaaaa
      481 ctttcggccg tgatacaact ggttaattta aaatcaaaca atggttggag cgacacaagt
      541 ttcactagcc tgttagagtt gttgaacaaa ttgctaccag aaggtaatga gttgccggtt
      601 tcaacatacc aagcaaagaa attaatgtgc ccaatgggat tggaaataca gagaatacat
      661 gcttgtccaa atgattgtat gttatacagg aatgaagaca aagaccttca tcaatgtaag
      721 gtatgtggta catctaggta taaacgtgga aaaccgactg ataatgttga tagtgatgtg
      781 tcagaaaatg gacctcctgc aaaattattg tggtacttgc ctatcatacc aagattaaag
      841 agattatttg cgaatgagaa agatgaaaaa ttattacgtt ggcatgctga agatcgtaaa
      901 aatgatggta aaatgcgaca tgtggccgat tcacttcaat ggaaaaattt tgataaagat
      961 tttgaagaat ttggggataa gatacgtaat ataaggttca gactcagttc agatggaatt
     1021 aatctgttcg gagatttgag tagccgtcac agcacgtggc ctgttcttct atgcatttat
     1081 aacctaccgc cttggctatg tatgaaaaga aaatacataa tgatgtctct tttgattcaa
     1141 ggcccaaagg aacctggaaa cgacattgat gtttatttgc aaccattagt tgatgaaatg
     1201 atggaattat ggagtaccgg catacacgtt tatgatgcat acaagaaaga atacttccaa
     1261 ctacgggcaa tgcttttttg caccattaat gattttcctg cttatggtaa tttgtctgga
     1321 tatagtacga aggggaaaaa ggcatgtcct atttatgagg aaaatactca ctcgatatgg
     1381 ctcacaaatt gtaagaaacc ggcatttatg gggcatcgga gagagcttgc tgagaatcac
     1441 ccgtatcgta aaaaggcgga tttatttgat ggtactatag aggatagaaa actaccagca
     1501 ccgttggatg gagaaactac actctccaaa gttgctaata taaaagttgt gtggggaaag
     1561 aaaggttttg gtcctccaaa aggtatttgg aagaaaaagt ctattttttg gaaattaccc
     1621 tactggaagc atttacgagt ccgacattgt attgatgtta tgcattttga gaaaaatgtg
     1681 tgtgaaagtt tgatagggtt actattgaac attcctggaa aaataaaaga tggaattaaa
     1741 gttagaaggg acatggaatt aatgaatatt agaccagagc tacaacctaa agatattgat
     1801 ggaaggacgg gttatgacat tttacgtggt attaaggttc catcaggata ctctgctaac
     1861 attaggaagt tggtttcgat gaaagatttg aagttacttg gtatgaagtc acatgattgt
     1921 catgtgattg atcctgatgt gctggatgaa tatcaaagag atatcatact tactctttgc
     1981 gaactcgaga tatactttcc accttctttc tttgatgtca tggttcattt ggtatctcat
     2041 attgtaggag aaataaaggc atgtggtcca gttttcttat gtgtcgggat tccacaaagt
     2101 catcatgaag gaagactagc aggtcaaggg acacttgggc gcaagacggg ctattcaaat
     2161 gttgccgatt atcaagaggc tcattttaat gtcttacaac acactacatc tattgatcca
     2221 ttcatacaag aacacatggc gttcttgaga caacaaaacc ctaaaaagag ggcaaagtgg
     2281 ttggcaaatc aacataaaat aactttttca gaatggttga aagacaaagt taggaggaca
     2341 cttccaaata ttgataaaac gatcgaagct ttgggattcg tccctaaaca tgtgttccaa
     2401 tatcaaggat atgacataaa taggtatacc ttttaa
//
LOCUS       XM_071832467             536 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TIFY 9-like
            (LOC139842316), mRNA.
ACCESSION   XM_071832467
VERSION     XM_071832467.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..536
                     /gene="LOC139842316"
                     /note="protein TIFY 9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842316"
     CDS             1..441
                     /gene="LOC139842316"
                     /codon_start=1
                     /product="protein TIFY 9-like"
                     /protein_id="XP_071688568.1"
                     /db_xref="GeneID:139842316"
                     /translation="MPPGFELAPFIAKATTTWGPWIESDIQGAISKMDPEIVKSVIQS
                     GKRPLDDDSMATTAPLTIFYNGMVSVFHVTPLQAEFVMKIGIGEETVDTSSVHHHQLH
                     PLKQQADEEKLVSDESYMDLPIARKKSLQRFLQKRKGRVSLVTE"
     misc_feature    163..252
                     /gene="LOC139842316"
                     /note="tify domain; Region: tify; pfam06200"
                     /db_xref="CDD:461847"
     misc_feature    367..>423
                     /gene="LOC139842316"
                     /note="Jas motif; Region: Jas_motif; pfam09425"
                     /db_xref="CDD:430603"
ORIGIN      
        1 atgccgccgg gattcgaact tgcgccattt attgctaaag ctaccacaac atgggggcca
       61 tggatcgaaa gcgatattca aggagcgatt tcgaagatgg atccagagat tgtaaaaagc
      121 gttattcaat cagggaagag accacttgat gatgatagca tggctacaac agctcctttg
      181 acaatatttt ataatggcat ggtttcggtt tttcatgtca ctccacttca ggcagagttt
      241 gttatgaaga ttgggattgg ggaagaaaca gtcgacacat cttcagtaca ccaccaccaa
      301 cttcatcctc ttaaacaaca agctgatgaa gagaagttag ttagtgatga gtcatatatg
      361 gacctaccta ttgcacgcaa gaagtcattg caacgattct tacagaaacg caaaggcagg
      421 gtgagtttgg tgactgaata acaaaaagaa acaaagaagg gtcactagtt actacaggtc
      481 tacagttagg ggttgtttgc acgtttcagt gatggattga taggtttgtt taattg
//
LOCUS       XM_071832468             363 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842317), mRNA.
ACCESSION   XM_071832468
VERSION     XM_071832468.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..363
                     /gene="LOC139842317"
                     /note="uncharacterized LOC139842317; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842317"
     CDS             1..363
                     /gene="LOC139842317"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688569.1"
                     /db_xref="GeneID:139842317"
                     /translation="MGNILQKGYYLADGIYPDWATLVKSFKSTVETKTTKFKRHQESA
                     RKDIERAFGVLQGHFAIIKSPARQFYIEKIQCIMYTCVILHNMITEDNGRAFCGLEED
                     YQPVRRSLSIRERFDTHL"
     misc_feature    <22..279
                     /gene="LOC139842317"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgggaaaca ttttacaaaa agggtattat ttagcagacg gaatttatcc tgattgggcg
       61 acccttgtga aatcgttcaa aagtacggtt gaaacaaaaa caacaaaatt caaaaggcac
      121 caagagtcag caagaaagga tatcgaacga gctttcggtg ttcttcaagg tcattttgca
      181 atcattaaaa gtcctgcaag acaattctat atcgagaaga tacagtgcat tatgtatacg
      241 tgcgtgattt tacacaacat gataactgaa gataatggtc gagctttttg tgggttagag
      301 gaggattatc aaccggttcg tcgttcatta tcaataagag aaaggttcga tacacatttg
      361 tga
//
LOCUS       XM_071832469             516 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin-conjugating enzyme
            E2 1-like (LOC139842318), mRNA.
ACCESSION   XM_071832469
VERSION     XM_071832469.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..516
                     /gene="LOC139842318"
                     /note="ubiquitin-conjugating enzyme E2 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 43 Proteins"
                     /db_xref="GeneID:139842318"
     CDS             1..516
                     /gene="LOC139842318"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 1-like"
                     /protein_id="XP_071688570.1"
                     /db_xref="GeneID:139842318"
                     /translation="MSDGQSFTDQRIQNELSAIRHDNSGDITFEWDETNIRHLVATII
                     GPNATPYEGGRFKIDIHIPDGFPIKPPHVRFITKIWHLNICSKNGAIRLSLFDDDWSP
                     GTGLENAMVSVQALLSAPDHYGDSSSFSRKARIWTRKYATADPPTNGTTKTSRTRPST
                     KTPAQLKDFIP"
     misc_feature    28..417
                     /gene="LOC139842318"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; Region:
                     UBCc_UEV; cl49610"
                     /db_xref="CDD:483950"
ORIGIN      
        1 atgagtgatg gtcaaagttt tactgatcaa agaattcaga atgaattgtc tgcaattaga
       61 catgataatt caggcgatat aaccttcgag tgggatgaaa ctaatattcg ccaccttgtt
      121 gctacaatta tcggcccgaa tgccacccca tatgaaggtg gtagattcaa aatcgacata
      181 catataccag atgggttccc gatcaagcct cctcatgtga gattcatcac caaaatttgg
      241 catctgaata tttgcagcaa aaatggagca atacgtttga gtttattcga tgacgattgg
      301 agtcctggga ccggacttga aaatgcaatg gtttcagttc aagcgctact gtctgcacca
      361 gatcattatg gcgattcttc ctcgtttagt aggaaagctc gtatctggac tcggaagtat
      421 gcaaccgcag atccacctac taatgggaca acaaaaacct caaggacaag accttcaact
      481 aagacaccag cacaattgaa agacttcata ccataa
//
LOCUS       XM_071832471             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842320), mRNA.
ACCESSION   XM_071832471
VERSION     XM_071832471.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139842320"
                     /note="uncharacterized LOC139842320; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842320"
     CDS             1..567
                     /gene="LOC139842320"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688572.1"
                     /db_xref="GeneID:139842320"
                     /translation="MGKLYKHKFILGDGRDILFWEDTWIGDQCFKENFPRLYRLEDDK
                     EAKVCDQIRWIDSIPQISWNWSPPPFGRGRDDLEMITVMISSYSNTETSQQKWRWNTS
                     GDGLFYTKILTNTLDEKLFGHLRNDAETVFNKLIPKSISIFIWRAMRRRLPVRVELDN
                     KECHLGYVHKMIVKSYVLHATMEDRVST"
ORIGIN      
        1 atgggtaagt tgtataaaca caaatttatt ttaggtgatg gtagggacat tttattttgg
       61 gaagacactt ggattggtga ccaatgtttc aaagaaaatt tcccgaggtt gtaccggctt
      121 gaagatgaca aagaagctaa agtttgtgat cagataagat ggatcgactc tattccgcaa
      181 ataagttgga attggagtcc cccacctttt ggaagaggac gagatgatct agagatgatt
      241 actgtaatga tttcgagtta tagcaacaca gaaacctcac aacagaagtg gagatggaac
      301 acaagtggtg atgggctttt ttacacgaaa attctcacca acaccctcga tgaaaaattg
      361 ttcggtcact tgcgaaatga tgcggaaaca gtgttcaaca aactaattcc aaaatcaatt
      421 agtatcttta tttggcgagc catgcgtaga agacttccag tgcgggtaga acttgacaac
      481 aaagagtgcc accttggata tgttcacaaa atgatagtca agagctatgt gcttcatgcg
      541 actatggaag accgggttag cacatag
//
LOCUS       XM_071832472            1299 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139842321), mRNA.
ACCESSION   XM_071832472
VERSION     XM_071832472.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1299
                     /gene="LOC139842321"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842321"
     CDS             1..1299
                     /gene="LOC139842321"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071688573.1"
                     /db_xref="GeneID:139842321"
                     /translation="MASYLLSFDSDSEDERIIALIQHLEDDDDEVESNRVPRSRIYIP
                     RNREEAAQNLWKDYFSDTPVFPPFKFKRRFRMRIELFLRISQGISNFDSHDTPEYFKF
                     FRERFDAIGRPTFTILQKMTSALRQLAYGTAADMFDEYLKMSDQTSVLCLDNFCKCII
                     TLYKERYMRTPNAYDVQRLYSKHEEKHGFKGMLGSIDCMHWEWKNCPVALKGQYTRGD
                     HKKPTIMLEAVASYDLWIWHAFFGMAGSNNDINVLNQSYVFDKLKKGTSPLAPFEVNG
                     NQYTKGYYLADGIYPDWATLVKGFASPTEAPRIKFTRFQASARKDVERAFGVLQGRFH
                     ILRLAARTMSVNKMRRVMDCCIILHNMILEDQGFALSDWEEEFITEDMENRPERIPNR
                     GRDQDVIIREIRDRTVHEQLTDDLVEHIWNLPSTFRTMNG"
     misc_feature    496..1101
                     /gene="LOC139842321"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcatcat atttacttag tttcgattcc gattcggaag acgagcgtat tattgcacta
       61 attcaacatt tagaagatga tgatgacgaa gtcgaatcca atcgtgttcc aagatcacga
      121 atttatattc caagaaatcg tgaagaagct gcacaaaact tatggaagga ttattttagt
      181 gacacacccg tgtttccgcc atttaaattt aaaaggcgtt ttcgtatgcg gattgaacta
      241 tttctccgaa tatcgcaagg tatttctaat ttcgattctc atgatactcc cgagtatttt
      301 aaatttttta gggaacgttt tgatgctatc ggtcggccga cttttacaat attgcaaaaa
      361 atgacttcgg ctctacgcca attggcgtat ggaactgccg ccgatatgtt tgatgaatat
      421 ttaaaaatga gtgaccaaac ctcagtactt tgtttagata acttttgtaa gtgtattatt
      481 acattataca aagaacgtta catgagaact cccaatgcat acgatgttca acgtttatat
      541 agtaagcatg aagagaaaca tggttttaag ggtatgctcg ggagtattga ttgtatgcat
      601 tgggagtgga agaattgtcc cgttgctttg aagggacaat acactagggg tgatcacaag
      661 aaacctacca ttatgcttga agcagttgct tcgtatgact tgtggatttg gcatgcattt
      721 tttggaatgg cgggttccaa caatgatata aatgttttga atcaatctta tgtttttgat
      781 aaacttaaaa agggaacatc tccactagca ccatttgagg ttaacggtaa tcagtacaca
      841 aaaggctatt acttagctga tggtatatat cctgactggg ctacgctagt caaaggtttt
      901 gcgagtccga cagaggctcc aaggattaag tttactaggt ttcaagctag tgcccgaaag
      961 gatgtagaga gggcatttgg ggtccttcaa ggtcgatttc atattttaag gttagcagca
     1021 cgcactatgt cggtaaacaa gatgcggaga gttatggact gttgtatcat attacataat
     1081 atgattttgg aggatcaagg atttgcgtta agtgattggg aggaagagtt cattaccgaa
     1141 gatatggaga accgtccaga acggatacca aatagaggac gggatcaaga cgttatcatc
     1201 cgagaaataa gagataggac ggtgcatgag caactaaccg atgatctagt tgagcatatt
     1261 tggaaccttc cgtccacatt ccgcaccatg aatggttaa
//
LOCUS       XM_071832473            1941 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            EXO70C1-like (LOC139842322), mRNA.
ACCESSION   XM_071832473
VERSION     XM_071832473.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1941
                     /gene="LOC139842322"
                     /note="exocyst complex component EXO70C1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139842322"
     CDS             1..1941
                     /gene="LOC139842322"
                     /codon_start=1
                     /product="exocyst complex component EXO70C1-like"
                     /protein_id="XP_071688574.1"
                     /db_xref="GeneID:139842322"
                     /translation="MEKKCNAKSKNRKKGNAEVVDDQDESLLNIDHDQISIEIDNLME
                     QSSNDNEKSNSTRVPNTVDTFVRIIESKIKAYNALKSGSRFGNMMNDDEYFIEAIRRL
                     SKLKVVLSENTSSFDNINKILQQAMLLMEEEFRALLLDLNASYEPIAKGATLESNNED
                     EFPGYSEENVNLMSKIALIMIDTGYKYECCQVYGTIRKDELMEQLKRYEFEKLNVEDV
                     HKSKWASLEPDITRWVKLTNHCSNVLFPAEKKLGETIFSHHFSGVFINLIRDITTSLI
                     EYANAVAMEKPKGKRLFKFIDMYEAIRSLRAVIEDSLSSDVEPDESSTLKSEISSAGD
                     NIGEAVVNMFYDLKSNIQSDSNKTTVSGGGVHPLIRYVMNYIKCAVEEYQKTLEHIFR
                     QYVKVGNEPISDVNNSSLSTQLLSVIDLLEANLETKSGLYKDLSLRYIFLMNNYRYIL
                     QVVKSTNEMKQLIGDNWCLRKSSDVRNYHKSYQRETWTKLLQWLTQEGVQVNGKPSRK
                     RLKERFKNFNAMFDEIHKTQSGWVVSDDQLLSEIRVSISAVVSPAYRSFVGRYKPQFE
                     GTKSIDKYIKYQPEDIESMIETLFEEDFKFFEFKRLYNKKKLECPRPGTLFYRLVQFL
                     PPLFGFENFDRKPKTKAKPNSN"
     misc_feature    691..1761
                     /gene="LOC139842322"
                     /note="Exo70 exocyst complex subunit; Region: Exo70;
                     pfam03081"
                     /db_xref="CDD:460798"
ORIGIN      
        1 atggaaaaaa aatgtaatgc caagtctaaa aatcgcaaaa aaggcaacgc agaagttgtg
       61 gacgatcaag acgaatcttt gttaaacatt gatcatgatc aaatctctat tgaaatagat
      121 aatttgatgg aacaatcatc taatgacaac gaaaaaagta actcaactcg agttcctaat
      181 acggtggaca cttttgttag aataatcgaa tcaaagatta aagcgtataa tgcattaaaa
      241 tcaggatcaa gatttggtaa catgatgaat gatgacgagt atttcataga ggccattcga
      301 cgtctatcca aacttaaagt tgttttaagc gaaaatacat cgtcttttga caacattaat
      361 aagattttac aacaagcgat gttgttaatg gaagaagagt ttcgagctct tttattagat
      421 ttgaatgctt cttatgaacc aatagcaaaa ggggccacat tggaatcgaa taatgaagat
      481 gagtttccag gttattcgga agaaaacgta aatttaatga gcaaaatcgc tctaataatg
      541 attgatacag ggtacaaata cgaatgttgt caagtgtatg gtacaatacg aaaagatgaa
      601 ttaatggagc aactcaagag gtacgaattc gaaaaattaa atgttgaaga tgttcataaa
      661 tcaaaatggg cttcacttga gcccgatata acccgctggg ttaaattaac aaaccattgt
      721 tcgaatgtcc tttttcccgc cgaaaagaag ctcggagaga caattttctc tcatcacttt
      781 tcaggcgtat tcatcaacct aattcgcgat attaccacgt cacttattga atatgcaaac
      841 gcggtagcaa tggaaaaacc gaagggaaaa cgcttgttca agtttatcga tatgtatgaa
      901 gcaattcgta gtcttagagc ggtaatcgaa gattcattgt cgagtgacgt ggaaccggat
      961 gaatcaagta cattgaaatc agagatatca tcggccggcg acaacattgg cgaggctgtg
     1021 gtaaacatgt tttacgattt aaaaagcaac attcagagcg acagtaataa aacaacagta
     1081 tcagggggtg gagtgcaccc cctcatacgt tacgttatga actacataaa gtgtgcagtc
     1141 gaagagtacc aaaaaacgtt ggaacatatt tttcgacagt acgttaaagt tggaaatgaa
     1201 cctatatccg acgtaaataa ctcatcatta tcgacacagt tattgtcagt tatcgacttg
     1261 ctagaagcta acttggaaac aaaatcggga ctctataaag atctatcgtt gcggtacata
     1321 tttctaatga acaattatcg gtacatttta caagtggtta aaagtacaaa cgaaatgaaa
     1381 caacttatcg gagacaactg gtgtcttcgt aagtcatcgg atgttagaaa ctaccacaag
     1441 agttaccaac gcgaaacgtg gaccaaattg ttacaatggc ttacacaaga aggtgttcaa
     1501 gtaaacggta aaccgagtag aaaaagacta aaagaaaggt tcaagaattt taacgcaatg
     1561 tttgatgaaa tacacaagac acaaagtggt tgggtggtaa gcgacgatca attgttatca
     1621 gagattcgag tctcgatatc tgcggtcgtg agtccggcgt ataggtcatt tgtcgggcga
     1681 tataaaccgc agtttgaagg tactaagagc attgataagt acataaagta tcaacctgaa
     1741 gatattgagt caatgatcga gacgttattc gaagaagatt tcaagttttt tgagtttaag
     1801 agattgtata acaagaaaaa actcgagtgt ccaaggcctg gaaccctgtt ttatagattg
     1861 gttcagtttt tgccacctct gttcggtttt gaaaattttg acagaaaacc aaaaaccaaa
     1921 gctaaaccga attcgaatta g
//
LOCUS       XM_071832474             801 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842324), mRNA.
ACCESSION   XM_071832474
VERSION     XM_071832474.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..801
                     /gene="LOC139842324"
                     /note="uncharacterized LOC139842324; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842324"
     CDS             1..801
                     /gene="LOC139842324"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688575.1"
                     /db_xref="GeneID:139842324"
                     /translation="MSITGRYKGTPAERTRVKERYKEAKREAKKAVAIAKDKAYEDLY
                     RKLDSIEGANDIYRIAKARERRGRDLVNVKYIKDEAGQNIVREDLIMKRWEEYFASLF
                     GRERTERNGELHKVRKYQNNCFCMRINQEKVRSALRMMGRNKAVGPDQIPIEAWRCLG
                     GDGVRWLTKLFNTTFRSAKMPMEWRLSEVIPIYKNKEDAQICSNYREVDLHQGSALSP
                     YLFALILDELTKRIQDNIPWCLIFADDIVLVSDSQDELNRRLEQWMTA"
     misc_feature    <628..>792
                     /gene="LOC139842324"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    637..639
                     /gene="LOC139842324"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgtcaatta cgggtcgtta caaagggaca cctgcagaga gaactagggt aaaagaaaga
       61 tataaagaag ctaaaagaga agcaaagaag gccgtagcaa ttgcaaaaga caaagcttat
      121 gaagatttat ataggaaact agactctata gagggagcca atgacatata tagaatagct
      181 aaagctaggg agcgaagagg cagggactta gttaacgtca aatatatcaa ggatgaagca
      241 ggccaaaata tagtgagaga agaccttatt atgaaaagat gggaagagta ttttgcatcc
      301 ctttttggta gggaaagaac agagcggaac ggggaactcc acaaggttcg taaatatcaa
      361 aacaactgtt tctgcatgag gattaaccaa gagaaagtta gatcagccct acgaatgatg
      421 gggagaaaca aagcagtagg accagaccaa attccgattg aggcgtggag gtgcctggga
      481 ggcgatgggg ttagatggtt gacaaaactt ttcaacacga cgtttagaag cgcaaagatg
      541 cctatggaat ggagactcag tgaggtcatt cccatctaca agaacaagga agatgcacaa
      601 atatgtagta attacagaga ggtagattta catcagggat cggcccttag cccatatctt
      661 ttcgctttga tcctagacga actaactaag aggatacaag ataacatccc atggtgccta
      721 atattcgccg acgatattgt tttagtttcg gactcccagg atgagcttaa cagaaggcta
      781 gagcaatgga tgactgccta g
//
LOCUS       XM_071832475             681 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842325), mRNA.
ACCESSION   XM_071832475
VERSION     XM_071832475.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..681
                     /gene="LOC139842325"
                     /note="uncharacterized LOC139842325; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842325"
     CDS             1..681
                     /gene="LOC139842325"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688576.1"
                     /db_xref="GeneID:139842325"
                     /translation="MGAEGLEFSWCWQRQPKGRTATELSSLCRLLSTASLDHNLKDSW
                     TWAFSNNGLFTVKLLNSIIDEQTMDSTSQLATLRNNLIPKKVEVFILRTQHKRLPVKT
                     ELDKRGIDLHSVRCPVCDDDLESLEHALITCKYASEIWDRIHKWWSIRNTGPYTLVDL
                     TSNNCPVPSSSPDVWQALKWIGLYCIWKNRNHKVFKGKPWNTPMIFNEIQSLSYLWIA
                     NRVRGLLA"
     misc_feature    <235..417
                     /gene="LOC139842325"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggagcag aaggtttgga attttcgtgg tgctggcaaa gacaacctaa aggtcgtaca
       61 gctactgaat tatcgagtct gtgcaggcta ctatcgacag catccctgga tcataattta
      121 aaggattcgt ggacttgggc tttttcgaat aatgggctgt tcactgtcaa attattaaat
      181 tccattatcg atgagcaaac tatggattcg acatctcaac tagccacgtt acgcaataat
      241 ttaatcccaa aaaaggtgga agtctttatt ttgagaacgc aacacaaacg tcttccggta
      301 aaaacggagc ttgacaaacg cggaattgac ctccatagtg taagatgtcc cgtatgtgat
      361 gatgatctcg aatctctcga gcatgctctc atcacctgca agtatgcttc ggaaatttgg
      421 gatcgaattc acaaatggtg gtctattcgt aacacgggtc cttataccct tgtggatctc
      481 actagtaaca attgtccggt tccgagctcc tctcctgatg tgtggcaggc tttaaaatgg
      541 ataggattgt attgcatttg gaaaaaccga aatcataagg tgttcaaagg taaaccttgg
      601 aatactccaa tgattttcaa cgagatacaa tcgttatcct atttgtggat tgcaaatcgt
      661 gtaagggggt tgctcgctta g
//
LOCUS       XM_071832477            1050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842326), mRNA.
ACCESSION   XM_071832477
VERSION     XM_071832477.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1050
                     /gene="LOC139842326"
                     /note="uncharacterized LOC139842326; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842326"
     CDS             1..1050
                     /gene="LOC139842326"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688578.1"
                     /db_xref="GeneID:139842326"
                     /translation="MKIISYNIRGFGSGKLSKFGETKKIILKEKPSFLAIQESKLRVV
                     NETWVKSLWGSDNCNFIQQEMIGKSSGQLLIWDTIEFDATDVIRFDCAIGIRGIWKSN
                     GAILNVLNVYRPHDDSKKQILWDQLLKTVENEDEVWVVCGDFNEVRCDSERFNCVFDA
                     NRANRFNNFINSSGLIDIPIGGRLFTRISDDGTKFSKLDRFLVSWKFHSIWGNISAVT
                     LDRTKSDHCPIFLKDAEINYGPKPFKVFDIWFDDKDAGKVVHEAWNTTDYSGTRMDIK
                     FAVKLKGVKAALKSWSKQNFGQIDMEIEILRNETTELELKAESVLLSETELESWREKR
                     KSWLEKETIKSCMLK"
     misc_feature    7..696
                     /gene="LOC139842326"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,112..114,334..336,427..429,433..435,595..597,
                     673..678)
                     /gene="LOC139842326"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(112..114,673..675)
                     /gene="LOC139842326"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(334..336,433..435,676..678)
                     /gene="LOC139842326"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaagatca tctcctacaa tattaggggt tttggttcgg gaaaattaag caaattcggg
       61 gaaacaaaga aaatcatttt gaaagaaaag ccttccttct tagctattca ggaatctaaa
      121 cttcgtgttg ttaatgagac ttgggtaaaa tcactttggg gttcggacaa ttgcaacttc
      181 atacagcaag aaatgattgg taaatcgagt ggacaacttc ttatctggga tactatcgag
      241 tttgatgcca ctgatgttat taggttcgat tgtgccattg gtattcgtgg aatttggaaa
      301 agcaacgggg ctatcttaaa cgtcctaaat gtgtacaggc cccacgacga tagcaaaaaa
      361 caaattctgt gggatcaatt gcttaaaacg gtcgagaatg aggatgaagt atgggttgtt
      421 tgcggagatt ttaatgaggt taggtgtgac tcggaaaggt ttaattgtgt ttttgatgcg
      481 aatagagcga atagattcaa caattttatc aactcaagtg gcttgattga tataccaatt
      541 ggtgggcgat tattcactcg aatcagtgac gacgggacta agtttagtaa attggatcgt
      601 tttctcgtct cgtggaaatt tcattcaatt tggggtaaca tctcagctgt aaccttagat
      661 agaactaaat ccgatcattg tccgatcttt ctaaaagacg ctgaaataaa ctatgggcca
      721 aaacctttta aggttttcga catctggttt gacgacaaag atgctggcaa ggtggttcat
      781 gaagcatgga acactactga ttactctggg accagaatgg atattaaatt cgctgttaaa
      841 ttgaaaggag tgaaagcagc cctcaaaagc tggagcaaac agaattttgg gcagattgat
      901 atggagatcg agattctaag gaatgaaact actgagctcg agttaaaagc tgaatcggtc
      961 ctattaagcg agacagaatt ggaatcgtgg agagaaaaaa ggaaatcatg gcttgaaaaa
     1021 gaaacgataa aatcttgtat gttaaagtag
//
LOCUS       XM_071832478             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842327), mRNA.
ACCESSION   XM_071832478
VERSION     XM_071832478.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139842327"
                     /note="uncharacterized LOC139842327; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842327"
     CDS             1..780
                     /gene="LOC139842327"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688579.1"
                     /db_xref="GeneID:139842327"
                     /translation="MSGVQLAAAHALEPEKPSTATSTTAAASRGGMMGSLRWIELQLV
                     AFIMVFSVIGLVPLFDLVFPALITGYLLLLSRLAFPGAAKTKEIVHATGMLRIYSIMG
                     TVIGLFLPLAYVLGGFARGDNEAVRSATPQLFLLSFQILTENVISGLSLFSAPVRALV
                     PMLYTVRRLFVILDWIQNVWLYKSLDQNANIQDIVWYWFGVSLAVANLAYFSINIFAF
                     LIPCFLPRAFELHFKERYETEAKFADDQHQNETKDKKSHVN"
ORIGIN      
        1 atgtcaggtg tacaactcgc tgcggctcat gccttagagc cggaaaaacc atccactgct
       61 acctccacca ccgctgccgc cagccgtggt ggcatgatgg gatcattacg gtggatagaa
      121 ctccaattgg tagcattcat tatggttttt tcagtcattg gtcttgtccc attattcgat
      181 ttagtttttc ccgctttgat aacagggtac cttctccttt tatcacgttt agcgtttcct
      241 ggtgcggcta aaacgaagga aattgtgcat gcaacgggaa tgttacgtat ttattcaatt
      301 atggggacag ttattgggtt gtttttgcca ttagcttatg tattgggagg gtttgcgaga
      361 ggtgataatg aagcggttag atcggctaca ccgcagttgt tcttgctttc gtttcaaata
      421 ttgacggaaa atgtgattag tggattgtca ttgttttcgg caccggttag agctttggtg
      481 ccgatgttgt atacggtcag aagattgttt gttatattgg attggataca gaatgtgtgg
      541 ttatataagt ctcttgatca aaatgccaat attcaggaca ttgtatggta ttggttcgga
      601 gtaagcttag cagtggcaaa tttggcttat ttctcgatca acatatttgc atttttaatt
      661 ccttgttttc ttccaagagc ttttgagctt cacttcaaag aaagatacga gacagaagca
      721 aagtttgctg atgatcaaca tcaaaatgaa accaaagata agaaatctca tgttaattaa
//
LOCUS       XM_071832479            2769 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842328), mRNA.
ACCESSION   XM_071832479
VERSION     XM_071832479.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2769
                     /gene="LOC139842328"
                     /note="uncharacterized LOC139842328; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842328"
     CDS             1..2769
                     /gene="LOC139842328"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688580.1"
                     /db_xref="GeneID:139842328"
                     /translation="MLKQKARLKWTIEGDENTKFFHAMIRRKNSKCNFRGHNINGSWC
                     EDPIVVKDAIFEHFKGIFSKKVHSRPSLLPKNSSGPDCVNRPGPGSVHMGAFGFSSQA
                     SGSGLSVIAGRPSAHISSNTTGTTATEIFKLSTSQAMGLEEQFSGEEIWETVNGCANN
                     KAPGPDGFNMRFFKKIWAIISDDLIEAIRGFWQNGTISPGCNSSFITLIPKVANPVNL
                     NEYRPISLIGSFYKIIAKLLSNRIKKVIPNLVGFEQSAFIKGRNIMDGVLFANESLEF
                     LRSKHIKSMVFKVDFEKAFDSLNWDFLDEMMLLMGFGSKWRKWITSCIGSASVSVLVN
                     GSPTKEFNLGRGVMQGDPLSPFLFIIAAEGLNWMAKSAVSNGRFFGVEIGKDKIPLSH
                     LQYADDTIFFGKWSFENLENLMKLLKCFELCSGLKVNYNKSKLFGVGVDKEEVRDMSN
                     LFGCNIGTFPMTYLGLPIGANVKKLSNWKPVIDKFVKRLLDWKARTISFGGRLTLVYA
                     VLNSLPLYYFSLYRAPPFVLKKLESVRRNFFWGGSGDVSKISWVKWDDVIRSRADGEL
                     SVGSLNCKNLALIGKWWWRFLTEPTSLWVKVIKRIEIDNAGVEFSRSFERKIGNGHNT
                     KLWEDVWLLDKPLKEVFKRLVRLESNPQVLVANRIHSFGGSVVFSWSWSRSITGRTKD
                     ELDRLKAILSSVTLNPEKEDYFSWKLSNFGSFSTKRLTKHIMEKVYPSSTTCVASMKN
                     NLVPKKVEIFVWRAKRERLPMLSELDKRGIDLHSVLCPLCDSNIETVGYSLLSCSHAW
                     VVWEKVRDWWGFDSANLSFDDLFRGLVPSSCSDWGHLLWQAKDENVYICRSNKCNSIC
                     RFMVFVEGIMKEKMKTRWCVNGGDGVVHGGCDMVVLLVEHKQKTRSGCRWYSKVMVKS
                     GGYDIRYW"
     misc_feature    610..1404
                     /gene="LOC139842328"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(868..885,1045..1050,1183..1185,1189..1194,
                     1390..1395)
                     /gene="LOC139842328"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(868..885,1045..1047,1189..1191)
                     /gene="LOC139842328"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1048..1050
                     /gene="LOC139842328"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <2218..2400
                     /gene="LOC139842328"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgttgaaac aaaaggcacg attaaaatgg accatcgagg gagatgaaaa caccaagttc
       61 ttccatgcta tgattcgtag gaaaaatagt aagtgcaatt ttcgtggaca taacattaac
      121 gggtcatggt gtgaagatcc aattgtggta aaggacgcga tttttgaaca ctttaaaggt
      181 attttcagca aaaaagttca ttctcgtccc agtttgctgc caaagaattc gagtgggcct
      241 gattgcgtca acaggcctgg gcctggttca gttcacatgg gtgcgtttgg gttttcttca
      301 caggccagcg gttctgggct ttctgtgata gctggcagac caagtgcaca tatttcatcg
      361 aataccactg ggaccacggc tactgagatt tttaaacttt ccacttcaca agctatgggg
      421 ctcgaggaac agtttagtgg ggaagaaatt tgggagacgg taaatggttg tgcgaataac
      481 aaagctccag gacctgatgg cttcaacatg agatttttta aaaaaatttg ggcaattatt
      541 agcgatgatt taatagaggc tatccgtggt ttttggcaaa acggtactat ctctccgggc
      601 tgcaattcgt cttttattac cttaatccct aaggtcgcca acccggtaaa tctaaacgag
      661 tatagaccta ttagtctcat tggtagcttt tataagatta ttgcaaagct cctttcaaat
      721 cgcattaaaa aagtcatccc gaatcttgtt ggctttgaac aaagcgcttt tattaaagga
      781 agaaatatta tggatggcgt tttgtttgcg aatgagtctc ttgaattttt gaggagcaag
      841 cacattaaga gtatggtgtt taaagttgat tttgaaaagg cttttgatag tctaaattgg
      901 gattttttgg atgaaatgat gctcttgatg gggtttggtt ccaagtggag gaaatggatt
      961 acttcttgta tcggttcggc atccgtctca gtcttagtca atggatctcc aaccaaggaa
     1021 ttcaacctcg ggagaggtgt tatgcaaggt gatcccctat ccccttttct cttcattata
     1081 gcggcagagg gacttaattg gatggctaaa tcggcggtct caaatggccg attctttggt
     1141 gttgaaattg gtaaagataa aatccctttg tctcacttac aatatgcaga tgataccatt
     1201 ttctttggca agtggagttt tgagaatttg gaaaacttaa tgaaactctt gaagtgcttt
     1261 gaactatgct ccggactcaa agtgaattat aataagagta agttgtttgg tgtgggtgtc
     1321 gacaaagagg aggttaggga tatgtcaaac ttgttcggtt gtaatattgg aacctttcct
     1381 atgacctatc ttgggcttcc tattggtgct aacgtgaaaa aattatcgaa ttggaagccg
     1441 gtgattgata aatttgtgaa gagattattg gattggaaag ctcgtacgat ttcattcggt
     1501 ggacgtttaa ctctcgtata tgcggttcta aatagtttac cgttgtacta cttttcgctc
     1561 taccgcgccc cgcccttcgt gcttaaaaaa ctcgagagtg taagacgcaa ttttttttgg
     1621 ggtgggtcgg gtgatgtttc caaaatttcg tgggttaaat gggatgatgt cattcgctcc
     1681 cgggcggatg gcgaacttag tgtgggttct ttaaattgta aaaatttggc tttaatcggc
     1741 aagtggtggt ggaggtttct caccgaaccc acttccttgt gggttaaggt cattaagagg
     1801 atcgagatag ataatgcggg ggtcgagttc tcaagatcat tcgaaagaaa gataggaaat
     1861 gggcataaca ctaaattgtg ggaagacgtt tggctattgg acaaaccact aaaggaggtt
     1921 ttcaaaagat tggtgcggtt agaatctaat ccccaagttt tggttgctaa tcgtatacat
     1981 tcgtttggtg gctcggtagt tttttcgtgg agttggtctc gctcgattac gggtcgtaca
     2041 aaggatgagt tggatagact taaagcaatt ctctcaagtg tgacattgaa cccggaaaaa
     2101 gaggattact tttcgtggaa gctaagcaat ttcggttctt tctctaccaa aaggttaaca
     2161 aaacatatca tggaaaaggt gtatccttca agtactacat gtgtggcttc aatgaaaaat
     2221 aaccttgtac ctaaaaaagt agaaatcttt gtatggagag cgaagcggga aagattgccc
     2281 atgttgtccg aacttgacaa acgggggatt gatcttcatt ccgttctatg cccgctttgc
     2341 gattcgaata ttgaaacggt gggttattca ctcttgtcgt gctcacatgc ttgggtagtt
     2401 tgggaaaaag ttcgtgattg gtggggattt gattcggcca acctctcttt tgatgatctc
     2461 tttcgtggtc ttgttccttc gagttgttcc gattggggac atctactttg gcaagcgaaa
     2521 gacgaaaacg tttatatttg tagaagtaat aagtgtaaca gcatttgcag gttcatggtt
     2581 tttgttgagg gtatcatgaa ggagaagatg aaaacaagat ggtgtgtgaa tggtggagat
     2641 ggtgtggttc acggtggttg tgatatggtt gttttgttgg tcgaacataa acagaaaact
     2701 agaagtgggt gtcgatggta ttcgaaggtc atggtgaaga gtggtggata tgatattcga
     2761 tattggtga
//
LOCUS       XM_071832480            1959 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DEAD-box ATP-dependent RNA
            helicase 20-like (LOC139842329), mRNA.
ACCESSION   XM_071832480
VERSION     XM_071832480.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1959
                     /gene="LOC139842329"
                     /note="DEAD-box ATP-dependent RNA helicase 20-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139842329"
     CDS             69..1778
                     /gene="LOC139842329"
                     /codon_start=1
                     /product="DEAD-box ATP-dependent RNA helicase 20-like"
                     /protein_id="XP_071688581.1"
                     /db_xref="GeneID:139842329"
                     /translation="MSSYVPPHLRKSVAATVATTAAATVTTSATATVTATVTALDNTT
                     AKYKINSKSTNNAFSNAEARRSSTNNHSQPSRALTVPNVVFSQWKPSERILRLKPEQI
                     EEVRLRLNVDVTVTPDSPPAPAPIESFTDMCLDSSIMKDIATHEYTTPTSIQAQAMPV
                     ALSGRDLLGCAETGSGKTAAFTIPMIQHCIAQPSVRRGDGPLALVLAPTRELAQQIEK
                     EVKAFSQSLESFRTAIVVGGTNISDQRSELRAGVEIVVATPGRFIDHLQQGNTSLTRI
                     SYVVLDEADRMLDMGFEPQIREVMHNLPEKHQTLLFSATMPVEIEALAQEYLTNPVQV
                     KVGKVSSPTENVSQNLEKITENEKIDRLLSLLVEESALAEKLGHPFPLTIVFVERKTR
                     CDEVAEALVAQGLNAVALHGGRTQSEREGALRDFRHGPTNILVATDVASRGLDVTGVA
                     HVVNMDLPKTMEDYVHRIGRTGRAGSTGRATSFFTDRDMFLLSQIRKAIADVQSGNTV
                     AFATGKVARRKEREAAAAQKEARIAQSKLPPTSINVEDKYKYMIAPAMIKKEGAADDA
                     WDD"
     misc_feature    450..1661
                     /gene="LOC139842329"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; Region: SrmB; COG0513"
                     /db_xref="CDD:440279"
ORIGIN      
        1 attggctcaa acacatacat acataaatta ctgaaataca cacatttcac actcatccat
       61 tcgaaacaat gtcttcttat gtaccaccac atctccgtaa gtcagtcgcc gccaccgtcg
      121 caacaaccgc agccgccacc gttacaactt ccgcaaccgc caccgtcacc gctaccgtca
      181 cagccctaga taacacaact gcaaaataca aaattaactc taaatcaact aacaatgcat
      241 tttcaaatgc agaagctcgc cgtagctcaa cgaacaatca cagccaaccg tcacgagccc
      301 taactgtacc taacgtcgtg ttttcgcaat ggaagccttc tgaacgtatt ttacgtctta
      361 aacctgagca gatagaagag gttagattac gactcaatgt tgatgttaca gtcactcctg
      421 actctccccc tgcacctgca cctattgaat cttttacaga catgtgcctg gactcgagca
      481 taatgaagga tatcgccact catgaataca caactcctac ctctattcaa gcacaggcaa
      541 tgcctgttgc tctaagtgga agggatctct taggctgtgc agaaacaggc agtggcaaaa
      601 ctgctgcttt tacaataccc atgatacagc attgtatagc tcagccttct gttcgacgcg
      661 gagatggtcc attagcacta gtgctggctc ccactagaga gcttgcacaa cagattgaga
      721 aagaggtgaa ggcatttagt caatcattag agtctttcag aactgcgatt gttgttggtg
      781 gaacaaacat ctctgaccag aggtctgaac ttcgggcagg agtagaaata gtagttgcta
      841 ctcctggaag atttattgat catttacagc aaggcaatac ttctcttaca cggatctcat
      901 atgttgtcct ggatgaagca gatagaatgc ttgatatggg tttcgaacct caaataagag
      961 aggttatgca taaccttcca gaaaagcatc aaacgctgtt gttcagtgca actatgccag
     1021 tggagattga agcactagca caggaatatc taacaaatcc agttcaagtc aaggttggca
     1081 aagtgagcag cccaacagag aatgtgtccc aaaatttgga gaaaattact gaaaatgaaa
     1141 agattgatcg gctgctatct ttacttgttg aggagtctgc actagctgaa aaattaggcc
     1201 atccatttcc cttaacaatc gtatttgtgg aacgaaagac aaggtgcgat gaagttgctg
     1261 aagctttggt agctcagggt ttaaatgctg ttgctcttca tggaggccga actcagagtg
     1321 aaagagaggg tgccttgcgt gattttagac atggtcctac taatatcttg gttgctactg
     1381 atgttgcatc tcgggggcta gatgttaccg gagttgctca tgtagttaac atggaccttc
     1441 caaagactat ggaggactat gtgcaccgga ttggtaggac aggtcgtgcc ggatcaacag
     1501 gacgagctac ttcgtttttt acagatcgtg atatgtttct tctatcacaa ataaggaaag
     1561 caatagcgga tgttcaatct gggaacactg tggcctttgc caccggcaag gttgctagga
     1621 ggaaagagcg agaagcagct gcggcacaaa aagaagcaag gattgcacaa tcaaagctcc
     1681 caccgacatc aataaatgtg gaagacaagt acaagtacat gattgctcct gccatgatca
     1741 aaaaagaggg tgctgctgat gatgcttggg acgattagta ttacaaaagg tagactagac
     1801 agactcttta caaattctaa ttccactact aaatatatct ttttggcctc attattcaag
     1861 tgcgatcaca ataagcttta gagtttggta gattcggtaa gctgtgtata atttgcgttg
     1921 acgtcgtttt ttagcatatg aatcttgttg acaaaatct
//
LOCUS       XM_071832481             210 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842330), mRNA.
ACCESSION   XM_071832481
VERSION     XM_071832481.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..210
                     /gene="LOC139842330"
                     /note="uncharacterized LOC139842330; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842330"
     CDS             1..210
                     /gene="LOC139842330"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688582.1"
                     /db_xref="GeneID:139842330"
                     /translation="MLDWGPVFVSVVLFVLFTPGLLFQLPGHRRCVEFGSFQTSGAAV
                     LMHTLLFFGSICLFLFAVKIHLYVN"
     misc_feature    7..201
                     /gene="LOC139842330"
                     /note="Protein of unknown function (DUF3339); Region:
                     DUF3339; pfam11820"
                     /db_xref="CDD:463361"
ORIGIN      
        1 atgttagatt ggggcccggt tttcgtatca gtggtactat tcgtattgtt cacccccggg
       61 ttgttgttcc agcttcccgg acataggcgt tgtgttgagt ttggcagttt tcagacgagt
      121 ggagcagccg tcctaatgca tacactgctt tttttcggtt ccatttgcct cttcttgttt
      181 gctgttaaga tccacctcta tgttaattag
//
LOCUS       XM_071832482            1014 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842332), mRNA.
ACCESSION   XM_071832482
VERSION     XM_071832482.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1014
                     /gene="LOC139842332"
                     /note="uncharacterized LOC139842332; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842332"
     CDS             1..1014
                     /gene="LOC139842332"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688583.1"
                     /db_xref="GeneID:139842332"
                     /translation="MTNLEWRLATLPFAFGGLGVYSAGDVSHYAFLASRLQTAGLQTK
                     LLRHAGNPSEVAAPILMKKLADVYFTKVTASAESTFSLSPRQSALWKSQQGVHTSAWL
                     RAVPILGLGQTMNAKTYRCVLCYRLGVPLFSISTACSACSRVFTGDIFGDHAVSCAGM
                     VGIKHRHNIVRDSLVDVCYRSGISARKEVDIGLSGGNDRALRPADVLLYSWDCGRDVC
                     VDLTGSSPLTQSGLSDFVPGRAVVEAARRKRVKYESCCQAIGYGFIPFSFSSLGELEK
                     EAISLLKRVQKSSMAQDIGAGAAAHIFTRIGFAIARDTVQMVIIHLGTRKNSYTIAYQ
                     EYE"
ORIGIN      
        1 atgacaaatt tagagtggcg gcttgccacc ttgccatttg cttttggagg gcttggtgtt
       61 tattcggcgg gagatgttag tcattatgct tttctggctt ctcggttaca gactgctggg
      121 ttgcagacca agctcctacg tcatgcgggt aatccgagtg aggtcgctgc cccaatactc
      181 atgaagaaat tggcagatgt ttatttcaca aaggttaccg cttctgcaga atccactttt
      241 tcgttatctc cccgacaatc ggccttatgg aaatcacagc agggtgttca cacctctgct
      301 tggctaaggg cagtccctat tttggggttg ggtcagacga tgaacgcaaa gacttaccga
      361 tgtgtgttgt gctaccggtt aggtgttcca ttgttctcta tctcgacggc atgctctgcc
      421 tgttcaaggg tttttactgg ggatattttc ggggatcacg cggtgtcttg tgctggtatg
      481 gtgggtatta agcatcgaca taatattgtt cgggattccc ttgttgatgt ttgttatcga
      541 tctgggattt ctgcgagaaa ggaggttgac attgggttgt ctggagggaa cgacagggcc
      601 ctcagacctg cagatgtgtt actttattcc tgggattgtg gtcgcgatgt ctgtgttgac
      661 ttgacagggt cttctccttt gacacagtct gggctttctg actttgtccc tggacgtgct
      721 gtggttgagg cggctcgtcg gaagcgggtc aagtacgaat cttgctgtca ggcgattggt
      781 tatggtttca ttcctttctc attttcttcc cttggggaat tagagaagga ggctatttct
      841 ttgcttaagc gggttcagaa gagttcgatg gcgcaagata ttggtgccgg tgctgctgct
      901 catattttta ctaggatagg ttttgctatt gctagagata ctgtacagat ggttataata
      961 catttaggta caagaaaaaa cagttacaca attgcttatc aggaatatga ataa
//
LOCUS       XM_071832483             438 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842333), mRNA.
ACCESSION   XM_071832483
VERSION     XM_071832483.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..438
                     /gene="LOC139842333"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842333"
     CDS             1..438
                     /gene="LOC139842333"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688584.1"
                     /db_xref="GeneID:139842333"
                     /translation="MGVADVILCIRIKRDDRGITITQSHYIEKILKRFKCDTCSTVSS
                     PVDQTVKLMPHSGKAVSQLEYSRAIGYRVFKYLKRTMGYGSTYTGFPSVLEGYLDASW
                     ITNIEDHSSTTGWIFLLGGGAISWASKKQTCITNSNMESEFVA"
     misc_feature    283..>435
                     /gene="LOC139842333"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgggagttg cggatgtaat cctatgtata aggattaaga gggatgatag aggtatcaca
       61 attactcaat ctcattacat tgagaagatt ttgaaaaggt tcaagtgtga tacatgttct
      121 accgtgagct ctcccgttga tcagactgtg aagcttatgc cccattcggg taaagctgta
      181 tcacaacttg agtactctcg agcaattgga tatagagtat tcaagtactt aaagcgtacc
      241 atgggttatg gtagcactta tactgggttc ccttcagttt tagaaggata tttggatgca
      301 agctggatca ccaacatcga agatcattca tctacgactg gttggatatt cctacttgga
      361 ggaggtgcta tctcatgggc ttctaagaag caaacatgca ttacaaattc aaacatggag
      421 tctgaatttg tagcttag
//
LOCUS       XM_071832485            1383 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842334), mRNA.
ACCESSION   XM_071832485
VERSION     XM_071832485.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1383
                     /gene="LOC139842334"
                     /note="uncharacterized LOC139842334; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842334"
     CDS             1..1383
                     /gene="LOC139842334"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688586.1"
                     /db_xref="GeneID:139842334"
                     /translation="MHTDGACGPEGAGAGIVLKSPEGEEYTFALRFSFPVTNNEAEYE
                     ALLSGMRVAKYLEVKELSVYVDSQLVANQFKGIFEAHDESMQKYLKLVQELAVDFDLF
                     QITQVSRALNKKADVLSKLAALTFSHFKKEIWVEEVKVKSIEEDSVSAAVEEEEQIWM
                     TPIIEFLTKGTLPIDSSEARNIKMKAPMYLLDKGILYRKSFLGPHLRCLNPTQAESIT
                     REVHEGMCALHSRHKTVASKIMRLGYYWPSMYRDAAEVILKCQSCQLHAPVSKAPRHP
                     MIPVASPWSFCKWAIDIVGPFPAGPGGVKFLFEGNLFSDWCQELNIKKTFTSVTHPHA
                     NGQCEVTNRDIVLGIKARLGLCRMGWIDELPNVLWAHRTTPKGATNETPFCLVYGFEA
                     VIPAEINVPTMRIASFDESSHSEELPSRAEDTGKLGPKWEGPYKVIGVSDTGAYRLAS
                     LDGRAIKRTC"
     misc_feature    1..369
                     /gene="LOC139842334"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(10..21,109..117,124..126,196..198,316..318,358..360)
                     /gene="LOC139842334"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    625..804
                     /gene="LOC139842334"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcacacag acggggcttg tggcccagaa ggcgcagggg caggaatagt cctaaaaagt
       61 ccagaaggag aggaatatac cttcgcactg cgattcagct tccctgtcac aaataatgaa
      121 gctgaatatg aagcattgtt atctgggatg cgggtagcaa aatatctgga ggttaaagaa
      181 ctgtcagtat atgttgattc gcagttagtt gcaaaccaat ttaaaggaat attcgaagca
      241 catgatgaat caatgcaaaa atacttaaag cttgtgcaag agctagcagt tgacttcgat
      301 ttattccaga taactcaggt ttcgagggcg ctgaataaaa aggcggatgt gctaagtaag
      361 ttagccgcat taacattcag tcattttaag aaagaaattt gggttgagga agttaaagta
      421 aaatctattg aagaagacag tgtttcggct gcagttgaag aagaggagca gatttggatg
      481 acaccaataa tagaatttct aaccaaaggt acattgccaa tagattcaag tgaagcaaga
      541 aatattaaga tgaaagcacc aatgtatctg ttagataagg gaattctata tagaaagtct
      601 tttctgggac ctcatttgcg gtgccttaat ccaactcaag cggagtcaat cacacgagaa
      661 gtacacgagg gaatgtgcgc tctgcattcg agacacaaaa cagttgcgtc caaaataatg
      721 cggcttggat attactggcc gtcaatgtac agagatgccg cagaggtaat actcaagtgt
      781 caatcgtgtc aacttcatgc accggtaagc aaggctccgc gacatcctat gataccggtc
      841 gcgtctccat ggtcgttctg caaatgggca atcgatatag tggggccatt tcccgcagga
      901 ccagggggtg taaaatttct gttcgaaggt aatctattta gtgactggtg ccaagaattg
      961 aatataaaaa aaacatttac atcagtcaca caccctcatg cgaatggtca gtgtgaggtt
     1021 acgaatcggg atatcgtttt aggaatcaaa gcaaggctgg gattgtgtcg aatgggttgg
     1081 atagacgaac tgcctaacgt tttgtgggca caccgcacaa ctccaaaggg cgcaactaat
     1141 gaaacacctt tttgtttggt gtacgggttc gaggctgtaa tacccgctga aataaatgtg
     1201 ccaactatgc gcatagcttc cttcgatgaa agtagccaca gcgaagaact gccaagcagg
     1261 gcagaggata cgggtaagct tggacctaaa tgggaaggac cttacaaggt tattggcgta
     1321 agcgatacag gggcgtatcg tctagcaagt ttggatggaa gagcaataaa gcgtacctgc
     1381 taa
//
LOCUS       XM_071832486            2014 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NETWORKED 4A
            (LOC139842335), mRNA.
ACCESSION   XM_071832486
VERSION     XM_071832486.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2014
                     /gene="LOC139842335"
                     /note="protein NETWORKED 4A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139842335"
     CDS             124..1776
                     /gene="LOC139842335"
                     /codon_start=1
                     /product="protein NETWORKED 4A"
                     /protein_id="XP_071688587.1"
                     /db_xref="GeneID:139842335"
                     /translation="MAASLAKSHKSYKRTESVNKHSWWWDSHISTKNSKWLAENVEEM
                     DQSVKRMLKLIENDGDSFAKKAEMYYQKRPELLSHVEEFYRMYRSLAERYDNVTGELR
                     RNIPSDLQSQGSGISDVGSEPPSITAPLSNPRPRSSARAAGFDFFLKSGGSSSDLVNK
                     EGDETSTLDSEYDSDDSSVNNYSSASANSDHKGLRKRIAELENELKKFQRQQDEIHSK
                     NDNVVEDLRVENEKLKIELQKYEIMVPKIVDLENDKVEDGKVFSIDDDLEAKFLEQER
                     KILALEIDLKVTKEKVKDSEDEVKRLRHEIENNGSNNDSLQEKLVVAEKEILSWKSKF
                     DKEKREVMRVMGRVSRYKENLAERDREIRAMRETLSNANKTLSEENVQLQEQVTKLLK
                     EQALMNDTMKEFDLRCQCSEEELRRLKIVKVEMEGEIEQLKVEKDGLVVKVNELDQEL
                     TLKDVEIDRLSQHLDQLHAEHVELVDRIEKSNKSIEELTCKGEELEREIERQREVIEE
                     GAEEKREAIRQLCFSLDHYRDGYQMLRQAFMGHNKRHQVMAS"
     misc_feature    187..408
                     /gene="LOC139842335"
                     /note="KIP1-like protein; Region: KIP1; pfam07765"
                     /db_xref="CDD:429647"
     misc_feature    931..>1683
                     /gene="LOC139842335"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     polyA_site      2014
                     /gene="LOC139842335"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tattaaaatt cagtcataat ttcagatttc ctgtgaataa agtatttgta aattatggag
       61 tcgaccttta aagtgttcgt tatattgaat ttcaggttat tgtgtaagca ctgaacaaga
      121 acaatggcag catctctggc caagtcacat aaaagttata agaggacaga atcagtaaat
      181 aaacattcct ggtggtggga tagccacatc agtaccaaaa actccaaatg gctagctgaa
      241 aatgttgaag aaatggacca gagcgttaaa cgaatgttga aactaatcga aaacgatgga
      301 gattcgttcg ctaagaaagc tgagatgtat taccaaaaga ggcccgaact tttatcgcac
      361 gttgaagaat tttatcgaat gtatcgatcg ttagctgaac gatatgataa tgttacaggc
      421 gagttacgaa ggaatatccc atcggatctt caatctcaag ggtcggggat atcggatgtt
      481 gggtcagaac caccttcgat aaccgccccg ttgtctaacc cacgacccag gtcctctgct
      541 cgagctgccg ggtttgactt ttttcttaaa agcggtggga gtagttcgga tttggtgaac
      601 aaagaagggg acgagacgtc tacattggat tcagagtacg attcagatga ttcatctgtt
      661 aataactact cgagtgcatc agcaaacagt gatcataaag ggttacgtaa acgaatcgct
      721 gagttggaaa atgaattaaa gaaatttcag aggcaacaag atgaaattca ttcgaagaat
      781 gataacgttg tagaagattt gcgagttgaa aatgaaaagt taaagattga actccaaaag
      841 tatgaaataa tggtaccgaa aattgttgat cttgaaaatg ataaagttga agatggtaaa
      901 gttttcagta tagatgatga tttggaagcg aaatttttgg aacaagaacg gaaaattctt
      961 gcgcttgaga ttgatctgaa agtaacgaaa gaaaaggtta aagattcgga ggatgaagtg
     1021 aaaagattaa ggcatgaaat tgagaacaac gggtcgaata atgatagttt acaagaaaag
     1081 cttgttgtag ccgaaaagga aattttgagt tggaaatcga agttcgataa ggaaaaacga
     1141 gaagtaatga gagtgatggg tcgggtttcg aggtataaag agaatctagc ggaacgtgat
     1201 cgagaaattc gggctatgag agaaacgttg tcgaatgcaa acaaaacgtt atccgaagag
     1261 aatgtgcaac ttcaagaaca agtgacgaag ttgttaaaag aacaagcgct tatgaatgat
     1321 acgatgaaag aattcgatct acgttgtcaa tgttcagaag aggaacttag aaggttaaag
     1381 attgtgaaag tggaaatgga aggtgaaatc gagcagttaa aggttgaaaa agatggacta
     1441 gtagttaaag tcaatgagct tgaccaagag ttgactttga aagatgttga gattgataga
     1501 ttgagccagc atttagacca attacatgca gaacatgttg agttagttga tcggattgag
     1561 aagtcaaata agtcaataga ggagttgact tgtaaaggtg aggaattgga aagagaaatc
     1621 gagaggcaac gagaagtgat tgaagaagga gcagaggaga aacgagaggc aatacgacag
     1681 ctatgttttt cacttgatca ttatcgagat ggatatcaaa tgctgagaca agcttttatg
     1741 ggtcataata aacggcatca agtcatggcg tcatagaata tggatactaa atgggtcaaa
     1801 cgagctttca cgggtcataa tatggaaccc gttggaaatg ggtatcgagt gcaacattgt
     1861 gagtaaacca tctgatggtg ctttacgttt ttcgcttttg ctttgtttct tttttgagtg
     1921 tgcaagttaa ggcttgaatg tttgatgtat ctgatagaaa ctatagtctg tagtgcatct
     1981 catctttaat ttactctttc gcttgtaagt ttta
//
LOCUS       XM_071832487             504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides non-specific lipid transfer
            protein GPI-anchored 1-like (LOC139842336), mRNA.
ACCESSION   XM_071832487
VERSION     XM_071832487.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..504
                     /gene="LOC139842336"
                     /note="non-specific lipid transfer protein GPI-anchored
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139842336"
     CDS             1..504
                     /gene="LOC139842336"
                     /codon_start=1
                     /product="non-specific lipid transfer protein GPI-anchored
                     1-like"
                     /protein_id="XP_071688588.1"
                     /db_xref="GeneID:139842336"
                     /translation="MRNKWYALVAIVMVICSGNKAANESSLGQQCASKLTAVMTCVAF
                     ATGKEAAPEQKCCDSVQEMKDSNPACLCFIIQQIHNGTNPMLQKMKIKETRLLQLPSA
                     CKIANASVTECPKLLKLPSNSADAAIFTSNSTMVPPTSGGGRLPSSSSTTVPLVSYAL
                     NIDISSQ"
     misc_feature    112..315
                     /gene="LOC139842336"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; Region: AAI_LTSS;
                     cd00010"
                     /db_xref="CDD:237980"
ORIGIN      
        1 atgcggaaca aatggtatgc tttagtggcg atagttatgg tgatctgtag cggcaataag
       61 gctgccaatg agtcatcatt aggacaacaa tgcgcatcaa agttgacagc agtgatgaca
      121 tgtgtggcgt ttgcaacagg aaaagaagcg gcgccggaac aaaaatgttg tgattcagtt
      181 caggaaatga aagatagtaa tcctgcttgt ttgtgtttta ttatacaaca aattcataac
      241 ggtactaacc cgatgttgca aaagatgaag attaaagaaa ctaggcttct tcagttgcct
      301 tcagcttgta agattgcaaa tgcaagcgtc actgagtgtc caaagctctt gaagttacca
      361 tcaaattcag ccgatgctgc aatattcacc agcaattcaa cgatggtgcc tccaacatct
      421 ggaggcggcc gtttgccatc atcatcgtca actaccgttc ctctggtatc atacgcgcta
      481 aacattgata ttagttcaca gtaa
//
LOCUS       XM_071832488            1104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842337), mRNA.
ACCESSION   XM_071832488
VERSION     XM_071832488.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1104
                     /gene="LOC139842337"
                     /note="uncharacterized LOC139842337; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842337"
     CDS             1..1104
                     /gene="LOC139842337"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688589.1"
                     /db_xref="GeneID:139842337"
                     /translation="MTSAQTGEAWVMEVLNGHPIRSVNAFRMHPDLLIKLCGELETNY
                     GLQSTDKMSTFEMVGIFMYTLALGLSNRDVMERFQRSGETISRAFHEVLKAIIGRDKG
                     FQGLARNIIRPKDPTFQLVPPQIMNDKRYMPYFKDCIGCIDGTHIRACITESQQLPYI
                     GRKGVPTFNVMATCDFDMCFTYVSVGWEGSAHDTRVFMHSIQNKSMNFPQPPEGRYYL
                     VDKGYPDRKGYLVPYPKTRYHQSQFQKEPPNNMQEAFNRSHSSLRSYIERSFGILKKR
                     FHILSEMPRFSVQTQIDVITATFALHNYIRTNSQEDIMFAIIDEHPNYIPRDELNDVN
                     NHDIRTEGLFEGRRNEMKQVRNNIATSIWNDRH"
     misc_feature    424..909
                     /gene="LOC139842337"
                     /note="DDE superfamily endonuclease; Region: DDE_Tnp_4;
                     pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 atgacttcag cccaaacagg tgaggcttgg gtgatggaag ttttaaatgg tcatccaata
       61 cgatctgtaa atgcatttag aatgcatcca gatttgctta taaaattatg tggagaactt
      121 gaaacaaact atggattgca gtcaactgat aaaatgtcca catttgagat ggtggggata
      181 tttatgtata cattggcatt gggattatct aatagagatg ttatggagcg ttttcaacgt
      241 tcaggggaga ctattagtag agcatttcat gaagttctaa aggcgataat tggtagagat
      301 aaaggtttcc aaggtctggc acgcaacatt ataagaccaa aagatccaac ttttcaacta
      361 gtaccacctc aaatcatgaa tgacaaaaga tacatgccgt atttcaagga ttgtattgga
      421 tgtatcgatg gaacacatat aagggcctgc attacagaga gtcaacaact accttatatt
      481 ggtagaaaag gagtacctac tttcaatgtg atggcaacgt gtgattttga tatgtgtttt
      541 acatatgtat cagtcggatg ggagggatca gcacatgaca cacgtgtttt tatgcactca
      601 attcaaaata agtcaatgaa cttcccgcaa ccacctgaag gtagatatta tttggttgat
      661 aaaggatacc cggacagaaa gggatacctt gttccatatc caaagacaag ataccatcaa
      721 tctcaatttc aaaaagagcc cccaaataat atgcaagaag cattcaaccg ttcacattca
      781 tctctacgaa gttatattga gaggtcattc ggaattttga agaaacggtt tcacatactt
      841 agtgaaatgc caaggtttag tgtgcaaaca caaattgatg ttatcacggc tacatttgca
      901 ttgcataact acattcgtac taatagtcaa gaagatatca tgtttgcaat aatcgatgaa
      961 catccaaatt acataccacg agatgagctt aatgatgtta ataatcatga catacgcacc
     1021 gaaggactat ttgaaggaag aaggaatgag atgaaacaag ttcgtaacaa tattgctact
     1081 tcaatatgga atgatcgtca ttaa
//
LOCUS       XM_071832489            1124 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842338), mRNA.
ACCESSION   XM_071832489
VERSION     XM_071832489.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1124
                     /gene="LOC139842338"
                     /note="uncharacterized LOC139842338; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842338"
     CDS             1..1107
                     /gene="LOC139842338"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688590.1"
                     /db_xref="GeneID:139842338"
                     /translation="MGSEEQVVLQSQFKEEMGEIENGKSLLASLPNSPNHYNGSRPTS
                     MVMKKAHTVFPAHLVAEAISTLHGLDLRWSGPITPQEMEYVKQYIFAKYPEYCNGLVA
                     EDSYKTNDVYNICSNDESSLEASTSDDKRKYSPRVITIKDSSSPSSFSPTNDLDGTQL
                     EPSKLLEILNKKSSFQGNFMSIPEIQARNKALQNCGLQEDEYLVLFTPTFKEAMVMIG
                     ESYPFFRGNYYMSIISEKEDYVREFVSTKDSKVIAAPESWLDLRIKGSQLSQYFRRKS
                     KYSPKGLFAYPAYMNGTSYSMHWISEAHRNSWHVLLDATELDPKKERLTLALHRPDFV
                     ICSVDNTHAQPSKIICLLVRRKSFETAQPLMFGS"
     misc_feature    559..>1065
                     /gene="LOC139842338"
                     /note="Molybdenum cofactor sulfurase; Region: PLN02724"
                     /db_xref="CDD:215384"
ORIGIN      
        1 atgggaagtg aagaacaagt tgtcctgcaa tcacaattta aggaggagat gggtgagatt
       61 gaaaacggaa aatcattgtt agcttctttg ccaaattcac caaatcatta caatggtagc
      121 agaccaacaa gcatggtcat gaagaaagca catacagtgt ttccagcaca cttggtggcc
      181 gaagcaatct cgactctcca tgggctcgat ctaagatggt caggacctat cacgccacaa
      241 gaaatggaat acgtcaaaca atatattttc gcaaaatacc ctgaatactg caacggcctt
      301 gtagctgaag acagctacaa gactaatgat gtatacaata tatgtagcaa cgacgaatca
      361 agtttagaag caagtacaag cgatgacaaa agaaagtact ccccgcgtgt tatcaccata
      421 aaagactcat cttcaccttc ttcttttagt cccacaaatg atcttgatgg tacacaatta
      481 gagccttcaa aattacttga aatcctaaac aaaaaatcct catttcaagg taatttcatg
      541 tcaatacccg aaattcaagc aagaaacaag gcattacaaa attgtggact acaagaagat
      601 gaatatcttg tcttatttac accaactttt aaggaagcta tggttatgat aggagaatca
      661 tacccttttt ttagaggaaa ttattacatg agtattataa gtgaaaaaga agactatgtt
      721 agagaatttg tgagtactaa agactctaaa gtaatcgcgg ctcccgaatc atggttagat
      781 ttacgaatca aagggtcaca acttagtcaa tattttagga gaaagagcaa gtatagtcca
      841 aaagggctat ttgcgtatcc ggcttatatg aatgggacta gttactcgat gcactggatc
      901 tctgaggcgc atcgaaattc ttggcatgtt cttttagatg caaccgaact ggacccaaaa
      961 aaggagcgat taacgttggc acttcatcgg cctgattttg tgatttgtag tgttgataat
     1021 acgcatgctc aaccatcgaa aatcatttgt cttttggtca ggagaaaatc atttgagact
     1081 gctcaacctt taatgtttgg ttcttgatac taatctatat gatt
//
LOCUS       XM_071832490             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842340), mRNA.
ACCESSION   XM_071832490
VERSION     XM_071832490.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139842340"
                     /note="uncharacterized LOC139842340; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842340"
     CDS             1..576
                     /gene="LOC139842340"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688591.1"
                     /db_xref="GeneID:139842340"
                     /translation="MVNKMCVEALDRSMRDICHQSNPDSMDTLFGGKTVVFGGDFRQI
                     LPVIQKGKREDIVDASLNSSYLWDYVTVLKLTVNMRLCGIETEANTRSFAQWILDIGN
                     GDVGESEDGVFDIEIPQDLLITDLDDPIGSIISTIYPDYLFNLGNPEYYQQRAILAPT
                     HEVVNIISDRMMMCLEGEERSYFSSDGICAS"
     misc_feature    <1..573
                     /gene="LOC139842340"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atggttaaca agatgtgcgt tgaagcacta gatcgttcta tgcgtgatat atgtcatcaa
       61 tccaatcctg atagtatgga tactctcttt gggggtaaaa cagttgtgtt tggtggtgac
      121 tttagacaaa tattacctgt tattcaaaaa ggtaaaagag aagatatagt agatgcatct
      181 ctaaattctt cttatttgtg ggattatgtt actgttttaa aacttacagt taacatgaga
      241 ttatgtggta ttgaaactga agcaaatact agaagttttg ctcaatggat acttgacata
      301 ggcaacggtg atgtcggtga atctgaagac ggagtttttg atattgaaat tccacaagat
      361 cttttgataa cagatcttga tgatccaatt ggttcgatca tctcaactat ttatccagat
      421 tatcttttta atcttggcaa tccagaatat tatcagcaac gtgcaattct tgctccaact
      481 catgaagtag ttaacatcat tagtgataga atgatgatgt gtttggaagg agaagaaagg
      541 tcatatttta gctcagacgg tatatgtgcg tcatag
//
LOCUS       XM_071832491            1989 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842341), mRNA.
ACCESSION   XM_071832491
VERSION     XM_071832491.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1989
                     /gene="LOC139842341"
                     /note="uncharacterized LOC139842341; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139842341"
     CDS             1..1989
                     /gene="LOC139842341"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688592.1"
                     /db_xref="GeneID:139842341"
                     /translation="MGDMVDDRVNKGRGPYTFCIRGQNCHQYGGLLPTDGQKPRFGQL
                     YIYDTVNETNNKKEAISGKNRTKASSSRYSLDEDLIRQIMEVLDEHNPLVKTFQMARD
                     WFLETPNMQMKIKLIGRRTKDGRNYNLPTVDEVAALIVGDINVSSYDERDIIIDSRIE
                     GLKRISELHTEYLTLQYPLMFIYVEDGYMTDILHRDVDEHSTRVKKRVTMREFFAYKL
                     QECAIPTLVHLGRKLYQQFVVDAYTVIEAESEMSQDVDQYTCAEIPNEIKEPELYQLV
                     SDLMIHGPCGERNPSCQCTDSDRKCIKRFPKPFSDVTKTDQDGYSITEEGMMEERYQA
                     HLNVEWCNQVASISYFFKYINKGNDRITAQHCNAETDEIQDYYDCRYVSSCEAIWRIL
                     NFDIHHHYPSVIRLPFHLVGQQQIIFDEGELIDEVLEKPSVNTSMFIEWMNCNASNQE
                     ARELTYVEFRTKFIWNKDNRSWIRHKRNTGAIGRIHHVAPASGLLDDDKEYIEGIQEA
                     FFGECCHFVRKLFAQLLLSNTTSQPEVVFEKIFQFLSVDIFHPHRTEIDKLLQRNSSS
                     LRSFSSMTCPSNHTRNISENHLIIDELSYDKSTLTNQHSDFITTLTSEQKEAYDQIIK
                     AVDHGKGGVFFLYGYGGTGKTFLWKTLSAALRSKGELF"
     misc_feature    1831..>1980
                     /gene="LOC139842341"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    1918..1938
                     /gene="LOC139842341"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgggtgata tggtggacga tcgtgtaaac aaaggtcgtg gcccttatac attttgtatt
       61 cgtggtcaaa attgtcacca atatggaggt ttattaccaa cggatggtca aaaaccgaga
      121 ttcggccagt tatacatata tgatactgta aatgaaacaa ataataagaa agaagcaatc
      181 agtggaaaaa acagaacaaa ggcttcgtct tcacgctatt cactcgacga ggatctcatt
      241 cgtcaaataa tggaagttct cgatgaacat aatcctcttg tcaagacgtt tcagatggct
      301 cgtgactggt ttctagaaac acctaatatg cagatgaaaa ttaagttaat tggtagacga
      361 accaaagatg gacgtaatta caatctgcca acggtagacg aagttgcagc acttattgta
      421 ggtgatatca atgtttcttc gtatgacgaa agggatatta taatcgatag tcgtattgaa
      481 gggttaaaaa gaatttctga gcttcacacc gaatatttaa ccctacaata tccacttatg
      541 tttatttatg tagaagatgg gtacatgaca gacattcttc atcgtgatgt cgatgagcat
      601 tccacaagag tgaaaaagag ggttactatg cgtgaattct tcgcatataa acttcaagaa
      661 tgtgctattc ccacacttgt gcacttgggt cgtaagttgt atcaacaatt tgtagttgat
      721 gcttacactg tgattgaggc agaaagtgaa atgtcccaag atgtagatca gtatacatgt
      781 gctgaaatac caaatgaaat caaagaaccc gaactttatc aactcgtgtc agatttaatg
      841 attcacggtc cttgcggtga aaggaatcca tcgtgccagt gcactgattc agacagaaaa
      901 tgtataaaaa ggtttccaaa acctttctca gatgtaacaa aaactgatca agacggttat
      961 tcaattaccg aagaagggat gatggaagaa cggtaccaag ctcatctcaa tgttgagtgg
     1021 tgtaaccaag ttgcttcaat tagttatttt ttcaaatata tcaacaaagg taatgatagg
     1081 attacagcgc agcactgtaa tgcagaaact gatgaaattc aagactacta cgattgtcga
     1141 tatgtttcat cgtgtgaagc catttggagg attttgaact tcgatataca tcatcattac
     1201 cccagcgtta taagactacc gttccatttg gtgggacaac agcaaatcat ttttgatgaa
     1261 ggggaattaa ttgatgaggt attagaaaag ccatcagtca atacgtcaat gttcatcgaa
     1321 tggatgaatt gtaacgcttc gaaccaagaa gcacgcgaat tgacttatgt tgaattccgg
     1381 acaaagttca tttggaacaa agataatcgg agttggatta ggcataaaag aaacaccggt
     1441 gcaattggtc gtattcatca tgtggcacca gcgtctggtt tattggatga tgataaggag
     1501 tatatagaag gtatacaaga ggcgtttttt ggggagtgtt gtcatttcgt cagaaaatta
     1561 tttgcacaat tactattatc taacactacg agtcaacctg aagttgtgtt tgagaaaata
     1621 tttcaatttt tatcggtgga tatctttcat ccgcacagaa cagagattga caaactactt
     1681 caacgcaata gtagttcatt gagaagtttt agttcaatga catgcccatc gaatcataca
     1741 aggaatattt cagaaaacca tcttattata gatgagctct cctacgacaa aagtacactt
     1801 acaaatcaac attcagattt cattacaacg ttaacatccg aacaaaagga ggcatacgat
     1861 cagataataa aagcggttga tcacggcaaa ggaggtgtgt tctttttgta cggttatggt
     1921 ggtactggaa aaaccttcct ttggaaaaca ctctcagctg cattgcgcag taaaggagaa
     1981 ttgttttaa
//
LOCUS       XM_071832492             612 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842342), mRNA.
ACCESSION   XM_071832492
VERSION     XM_071832492.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..612
                     /gene="LOC139842342"
                     /note="uncharacterized LOC139842342; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842342"
     CDS             1..612
                     /gene="LOC139842342"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688593.1"
                     /db_xref="GeneID:139842342"
                     /translation="MNKINNIVDLLPDDLLGEILSRVGQNSSTQLGVARLVCKAFFKQ
                     AQHPLVYQRLSFDRLSVGFWVSFKWGLLFYFDGKYTQDRLRYLKQTSNSQLVEVVYVY
                     GLVMIASHDVNEKDIGLKILNQTFPPIPDYVVDVRTKVYDLIHQTWRRNRHPFADVET
                     RCPISGHKGYFPRISGFELKTLECMSCFWAYELKIFVNRYGFN"
     misc_feature    25..162
                     /gene="LOC139842342"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(31..36,40..48,55..60,67..69,109..117,121..123,
                     130..132)
                     /gene="LOC139842342"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438922"
     misc_feature    order(31..33,43..45,52..57,64..69,79..81,94..99,109..117,
                     121..123)
                     /gene="LOC139842342"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438922"
ORIGIN      
        1 atgaataaga tcaacaatat tgtcgatctt cttcctgatg atttgcttgg tgaaatatta
       61 tcaagagtcg gccaaaattc ttctactcag ttgggtgttg ctcgattggt ttgcaaagcc
      121 ttttttaagc aagcccagca tccattggtt tatcaaaggc tttcctttga tcgtttatct
      181 gtagggtttt gggtatcctt caaatggggt ttgttatttt attttgatgg aaaatacacc
      241 caagataggc tccgttattt aaaacaaaca tcaaactccc aattagtaga ggttgtgtat
      301 gtttatggtt tggtgatgat tgcttctcac gatgtaaatg aaaaggatat cggtttaaaa
      361 attcttaatc agacatttcc accgataccg gattatgtgg ttgatgtgag aacaaaggtt
      421 tatgacctta tacatcaaac ctggagaagg aaccgccatc cttttgctga cgtggaaacg
      481 aggtgcccta tatccggcca caaaggttat ttcccaagaa ttagtgggtt tgaactaaag
      541 acgctagaat gcatgtcgtg cttttgggct tatgagttga agatttttgt aaatcgatat
      601 ggatttaatt ag
//
LOCUS       XM_071832493             576 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At1g67623 (LOC139842343), mRNA.
ACCESSION   XM_071832493
VERSION     XM_071832493.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..576
                     /gene="LOC139842343"
                     /note="putative F-box protein At1g67623; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842343"
     CDS             1..576
                     /gene="LOC139842343"
                     /codon_start=1
                     /product="putative F-box protein At1g67623"
                     /protein_id="XP_071688594.1"
                     /db_xref="GeneID:139842343"
                     /translation="MDQVSKNILDALPKDILGEILSRVGQESSVHFSVARLVCKDFRK
                     QSEHYLVYRRLSLDRWPIIAWGYFDGVNTDLGLRYLEEASNYGLNQAVYVYGLIMFPS
                     DDLEEKDKSLKIINARFPPLPNLVVSVSMDVYGLLQQLWRRNLHPFADLATTCPISGH
                     IGYFPYVHGFELTIPDCMSCFWAYELGLIIN"
ORIGIN      
        1 atggatcaag tttcaaagaa tattctagat gctcttccta aagacatact tggtgaaata
       61 ttgtcaagag tcggtcaaga atcatcggtt cacttttctg ttgccagatt ggtttgcaaa
      121 gactttcgta agcaatccga acattatttg gtttatcgaa ggctttcctt agatcggtgg
      181 cctatcatag cttggggtta tttcgatgga gtaaacacag acttagggct tcgttattta
      241 gaagaagctt caaactatgg tcttaaccag gcagtttatg tttatggttt gatcatgttt
      301 ccatctgatg atttggagga aaaggataag agtttaaaaa taattaatgc cagatttcca
      361 ccactgccga atttggtggt ttctgtcagt atggatgttt atggtttgtt acagcaatta
      421 tggcgaagga acctccatcc ttttgctgac ttggcaacca cttgccctat atccggccac
      481 ataggttatt tcccatatgt tcatggcttt gaactcacca taccagactg tatgtcgtgt
      541 ttttgggctt atgagttagg gctgattata aattga
//
LOCUS       XM_071832494            1242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842344), mRNA.
ACCESSION   XM_071832494
VERSION     XM_071832494.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1242
                     /gene="LOC139842344"
                     /note="uncharacterized LOC139842344; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842344"
     CDS             1..1242
                     /gene="LOC139842344"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688595.1"
                     /db_xref="GeneID:139842344"
                     /translation="MATSKNIIQLGYGYDEGKPTLELIISDEEGAKIVIDIRNSLKAK
                     FDNLIREWGLFCISNVVVVDSPLQFRTKHIQHEYKLMFTKKTTVVPFPLTEWRGTNDV
                     IGRVANYSEVQDFRSTGELKSKYINLQLIDLGLTQIHSSEDSICSLAPSLSISSARDP
                     KSFFKKAQYVGLDRLNPSMEGIYIIQATINTILPDDTWYYIACKKCNKSAKPVIPNCD
                     LTLDVVQLLNLERKCYSCIDKPEVVVRFKVPIHVENQTGTASFTIFESVVKKYVTPSA
                     YELIKALSEDDDYPEKLELLLQKTLLFKIDVSGYNKEREIRNYTVKDVTDDPTCFELY
                     ESFKVDQQMVFEDVEIEESSEKQTLVGNCVSNASGSQTVDHSHDTCFSPPLKKIKQEG
                     IKSPASVKSSTTKVKFSDHSK"
     misc_feature    <58..264
                     /gene="LOC139842344"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(64..75,79..81,100..108,112..114,157..159,181..189,
                     235..243)
                     /gene="LOC139842344"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(160..162,166..168,172..174,259..261)
                     /gene="LOC139842344"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    547..981
                     /gene="LOC139842344"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(550..552,898..900,904..906,910..912,973..975)
                     /gene="LOC139842344"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(565..573,745..756,760..762,778..786,790..792,
                     895..897,916..924,949..951,955..960)
                     /gene="LOC139842344"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggccacat ccaagaacat aattcagctg ggatatggtt acgatgaagg caagcccact
       61 ttggagctaa tcatttcgga tgaggagggc gctaagattg taatcgacat ccgtaactcc
      121 cttaaggcca aatttgataa cctcattagg gaatggggct tattttgtat ttctaatgtt
      181 gttgtagttg atagtccgct acaatttcgg accaaacata tccaacatga gtacaaactc
      241 atgtttacta agaaaacaac tgttgtgcca ttcccactaa ccgaatggag aggaactaat
      301 gatgttattg gacgtgtagc aaattattca gaagtacagg attttcgaag cactggtgaa
      361 ctcaaatcca agtacatcaa tcttcagctc attgatttag gcctcaccca aatccattct
      421 tctgaagatt ccatttgttc gttagctcct tcgttgtcaa tttcttctgc acgtgatcca
      481 aagtcctttt ttaaaaaggc tcagtatgtt ggtttagatc ggttgaaccc gtccatggaa
      541 ggcatatata ttattcaggc cacaatcaat accattcttc ccgacgacac ttggtactac
      601 attgcctgca agaagtgtaa caagagtgct aaacctgtta tccctaactg tgatcttaca
      661 ttggacgttg ttcaactttt aaacttggaa cggaagtgtt acagttgtat cgataagccg
      721 gaggtggtag tgaggtttaa ggtgccgatt catgtagaaa atcaaaccgg cacagcatct
      781 ttcactattt tcgaatctgt ggtgaagaag tacgttaccc catcggctta tgagttaatc
      841 aaggcattgt ctgaagatga tgattatcct gaaaagctgg aacttctttt acagaagacc
      901 cttttgttta agatagatgt tagtggttat aacaaagaac gagaaattcg aaactacact
      961 gttaaagatg tgaccgatga cccaacatgt tttgaactct atgagagttt caaggtcgat
     1021 caacaaatgg tttttgaaga tgttgagatt gaagaatcat ctgagaaaca gactttagtt
     1081 gggaattgtg tctctaatgc ttctggaagt cagacagttg atcacagtca tgatacctgt
     1141 ttcagcccac ctctcaaaaa aatcaaacaa gaaggaatca aatctccagc atctgttaag
     1201 tcttcaacaa ccaaggttaa attctccgat cattctaaat ga
//
LOCUS       XM_071832495            1035 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842345), mRNA.
ACCESSION   XM_071832495
VERSION     XM_071832495.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1035
                     /gene="LOC139842345"
                     /note="uncharacterized LOC139842345; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842345"
     CDS             1..1035
                     /gene="LOC139842345"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688596.1"
                     /db_xref="GeneID:139842345"
                     /translation="MDANNGILPLAYGIGAGETTDHWTRFFGNLRDSLQSSGCCIDNL
                     TIISDRAPAIAADSTRTLTTVGLNGWSRHHVDRVRYAYLTTNSAESMNALSVHARKLP
                     VTMLLEFFRASVQQWFWEHRNTADGLTTPVTPYAERKLGKRNRKSLTWSVKPISQVKF
                     EVMDMKKGGKVNLQDKTCTCKQWQFSGLPCGHVMAVARYFVLRDVTTHVQKYFHTETY
                     NSAYMEDINPLDHISEWIDPGHLQTVRPPLVTKRQSGRPKSTARIPSQGEDKDNFKSK
                     RKCSRCLEPGHTRSTCTAHYDLSEGIQKSKCKSKTKAKPKGMVKGKGKGKREDSCSAQ
                     FDSTYNLSDD"
     misc_feature    526..606
                     /gene="LOC139842345"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
     misc_feature    820..>876
                     /gene="LOC139842345"
                     /note="C2H2 zinc-finger; Region: zf-C2H2_10; pfam16588"
                     /db_xref="CDD:374649"
ORIGIN      
        1 atggatgcta acaatggaat ccttccatta gcctacggta ttggagcagg agagaccact
       61 gatcattgga caaggttttt tggtaatcta agagactctc tacagtcttc ggggtgttgt
      121 attgataatc ttaccattat atctgacagg gcacctgcaa tagccgctga cagtacacgt
      181 acactcacta ctgttggcct caacggatgg tctagacatc atgtagatcg tgttcggtat
      241 gcttacctga ctactaatag tgcagagtcc atgaacgcgc tgtcagttca tgcgaggaaa
      301 cttcctgtta caatgcttct agaattcttt agagcttcag ttcaacaatg gttttgggaa
      361 catcgaaaca ctgctgatgg tttaacaaca cctgtcacac catatgcaga gcgtaagctg
      421 ggtaaaagaa atcgtaagtc tcttacttgg agtgtcaaac cgatatcaca agttaagttt
      481 gaggtaatgg atatgaaaaa aggcggtaaa gtcaatctac aagataaaac ttgcacatgt
      541 aaacaatggc agttttccgg tctaccttgt ggacatgtaa tggcagtagc aaggtatttt
      601 gtcttacgtg acgttactac acacgttcag aagtatttcc acactgaaac gtacaattct
      661 gcatacatgg aagacattaa cccgctggat catatttctg aatggataga tccaggacac
      721 ctacaaaccg tccgaccgcc attagttaca aaacgacaat caggtagacc gaagagtact
      781 gctcgtatac cgtcccaagg agaagacaaa gacaatttca aatctaaaag aaaatgcagt
      841 cgttgcttgg aaccaggaca cactagatca acttgcaccg cacattatga tctatctgaa
      901 ggtatacaaa agtccaagtg taagtcaaaa acgaaggcaa agccgaaggg gatggtaaag
      961 gggaagggga aaggaaaacg tgaagactca tgctcagcac aatttgactc gacttacaat
     1021 ttgagtgatg attag
//
LOCUS       XM_071832496             651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At5g07610-like
            (LOC139842346), mRNA.
ACCESSION   XM_071832496
VERSION     XM_071832496.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139842346"
                     /note="F-box protein At5g07610-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842346"
     CDS             1..651
                     /gene="LOC139842346"
                     /codon_start=1
                     /product="F-box protein At5g07610-like"
                     /protein_id="XP_071688597.1"
                     /db_xref="GeneID:139842346"
                     /translation="MGLAVHPADCRYYKLVYVYQNRDCSSKTKRWKELNETLYTPNHV
                     PYLSCGVYVNGGIYWSPFNNHIDSWYYFKLGIKKFQKLELPSSMKMQGSGMVMSVCYF
                     GESGGRLHLSDLVRLNGQMKLIVYEMMSYNSRWVVMYQVEIDQFIAQLHNGMWLEVLD
                     IVRGEEEKDTFMVVKYLNEIKRFNLFDKSFKKLSIVPVLYKIVSGLELSSSIGSKI"
ORIGIN      
        1 atgggtcttg ctgttcatcc agccgattgt cgatattaca aactcgttta tgtgtatcaa
       61 aatcgcgatt gctcttctaa aacaaagaga tggaaggaat taaacgagac gttatatacg
      121 cctaatcacg tgccttattt atcgtgtgga gtgtatgtga atgggggcat atattggtct
      181 ccatttaata atcatatcga ttcatggtat tattttaagt tgggtataaa aaagtttcaa
      241 aagttggagt taccatcttc tatgaaaatg cagggttctg ggatggtaat gtccgtttgt
      301 tactttgggg aatccggtgg gcgtttacat ttatcggatt tggttcgttt gaacgggcaa
      361 atgaaattaa tcgtttatga aatgatgagc tataattcaa gatgggtggt catgtatcaa
      421 gttgagattg atcaatttat tgctcaactt cataatggca tgtggttgga agttttagat
      481 attgttagag gtgaggaaga aaaagataca tttatggtgg tgaaatatct taatgagatt
      541 aaaagattta atctttttga caagagtttt aagaaattgt ctattgtccc agtattgtat
      601 aaaattgttt ctggtttaga gttgtcttcg agcatagggt ccaaaattta g
//
LOCUS       XM_071832497            1113 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842348), mRNA.
ACCESSION   XM_071832497
VERSION     XM_071832497.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1113
                     /gene="LOC139842348"
                     /note="uncharacterized LOC139842348; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842348"
     CDS             1..1113
                     /gene="LOC139842348"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688598.1"
                     /db_xref="GeneID:139842348"
                     /translation="MKILSLNVRGFGFGKESKFGDVRKLCIVERPSIFALQESKCHAK
                     DDSWFFGLWGSKDCSFSQKEMVGKSGGQIIIWDKNIFEVNSELISEFFIAIWGKWKNS
                     GHESIIIHAYGPHDDLNEKRMWESLDMLLGSTGVSWLICEDFNEVRDCSERLNCEFVE
                     NRAKMFNDFIDRNMLVDIPMGGRKFTRVSDDGVKMSKLDRFIVTSDFLSLWTDLKVIA
                     LNRKVSDHCPIMMSDDEVNFGPKPFKIFDEWLLVDGIGDVIAESWKGMMEGNRKDCVF
                     RNKLKRLKGDLKEWSKSHFGNLDVEIENAKKVVMELELKAESGFLSVEDHENWSASRK
                     TWLEKEKVKTGMLRQKARVRWMTDGDENSKYFHNSL"
     misc_feature    7..690
                     /gene="LOC139842348"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,112..114,334..336,427..429,433..435,595..597,
                     673..678)
                     /gene="LOC139842348"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197305"
     misc_feature    order(112..114,673..675)
                     /gene="LOC139842348"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197305"
     misc_feature    order(334..336,433..435,676..678)
                     /gene="LOC139842348"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197305"
ORIGIN      
        1 atgaagattt tgtcattaaa tgttcgtggg tttgggttcg ggaaagaaag taaatttggt
       61 gatgtgcgta aattatgtat tgtggaaaga ccttccattt tcgcacttca agaatcaaaa
      121 tgtcatgcta aagacgatag ttggtttttt gggctttggg gatccaagga ttgtagtttt
      181 tctcaaaaag aaatggtcgg taaatcgggt ggtcaaatta ttatttggga caaaaatatt
      241 ttcgaggtga atagtgagct tataagtgag ttttttattg caatttgggg taaatggaaa
      301 aactcgggcc atgaatctat cattatacat gcatatggac cgcatgatga tttgaatgaa
      361 aaaaggatgt gggaatctct tgatatgttg ctaggtagta ccggggtttc ttggcttatt
      421 tgtgaagact ttaatgaagt tagggattgt tcagaaagat taaattgtga atttgttgaa
      481 aaccgggcca aaatgttcaa tgacttcatc gatagaaata tgctagttga tattccaatg
      541 gggggaagga aattcactag agttagtgat gatggagtta agatgagcaa gttagataga
      601 tttattgtaa cgagtgactt cctaagtttg tggacggatt taaaggtcat tgctttaaat
      661 agaaaggttt cggatcattg tcctattatg atgtcggatg atgaagtcaa ttttggacct
      721 aaaccgttta aaatctttga tgaatggctg ttagtggatg gtattggaga tgtaattgcc
      781 gaatcctgga aaggtatgat ggaaggtaat cgaaaagatt gtgttttccg taacaagcta
      841 aaaaggttaa aaggggatct taaagagtgg agcaaatctc attttgggaa tcttgatgta
      901 gaaattgaaa atgcaaaaaa ggtggtgatg gaacttgaac tcaaagcgga atcgggtttt
      961 ttaagtgttg aggatcacga gaattggagt gcatcgagaa aaacttggct agaaaaggaa
     1021 aaggtaaaaa ctggaatgtt gagacaaaaa gcacgggtac gttggatgac cgatggtgat
     1081 gaaaactcaa aatattttca caactcacta tga
//
LOCUS       XM_071832498             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842349), mRNA.
ACCESSION   XM_071832498
VERSION     XM_071832498.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139842349"
                     /note="uncharacterized LOC139842349; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842349"
     CDS             1..462
                     /gene="LOC139842349"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688599.1"
                     /db_xref="GeneID:139842349"
                     /translation="MSSFLFFIVTKGLHSLIREKVDQGSIRALLLKWIWRVKVSRNSY
                     WASIDCLICWPNGGIADGGKYIRSSIWSNFFGDAKAKGSNTNLANSLWVKVGNGSSSQ
                     FWLDNWRGGGSLKQGFPQLYHIAVNKVAHLQRVELGVVLDKNWPKELDSFN"
ORIGIN      
        1 atgagttcat tcctattttt cattgtaacg aaaggtcttc actctttaat tcgtgagaaa
       61 gtagatcaag gtagtattag agctttgctc ctaaaatgga tatggcgagt taaggtctct
      121 cgaaactctt attgggcctc tattgattgt ttgatttgtt ggccgaatgg tggtatcgct
      181 gatggtggca aatacatccg ttcttctatt tggtccaatt tttttggtga tgctaaggca
      241 aaaggtagca acaccaacct tgctaattcg ttatgggtta aagtggggaa cggatcgtcg
      301 agtcagtttt ggctcgataa ttggaggggt ggtggctcgt tgaaacaagg gttccctcag
      361 ctatatcata tagccgtaaa taaggtggct catttacaac gagtggaatt gggagtggtc
      421 ttggacaaaa attggcccaa ggaactcgac agttttaatt ga
//
LOCUS       XM_071832500            2340 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842350), mRNA.
ACCESSION   XM_071832500
VERSION     XM_071832500.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2340
                     /gene="LOC139842350"
                     /note="uncharacterized LOC139842350; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842350"
     CDS             1..2340
                     /gene="LOC139842350"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688601.1"
                     /db_xref="GeneID:139842350"
                     /translation="MTVYNSGGSTFGAGYLAVKQVFPVEDYEEKISQRLVEAAHVNDQ
                     KVAFECLADTFVDVNFVGTVCLNSKKTEIVLHDESAAEVRFEFQEFKTDVTALFLAAH
                     SGNATLVKKLLSFGANVNKKLFRGYATTAAVRGNHVEILELLLEAGASQLACEEALIE
                     ASHIGSARPAKTLIKSDLIRPNVAVHALVIASCRGFVDVVDTLLNCGIDINGTARVSL
                     RSSKPFLHTDVTCNALVAATVNRHISVVRLLLQAGARTDSKVSLGAWSWDMTTGEEFR
                     VGAGLAEPYSVTWCAVEYFEETGTILNMLLQYISPNVPHFGRSIIHHAIVCANLKAVD
                     VLLKCGADPELPVQTIHGSGFRLIHLAATLGYHGVLNHLVDASCNLDSRTETGETALM
                     ICVRHKYVDCIKLLAGSGADFGLVNKANQCVQSIAGSVRWTLGLRQVILEVVRSGKIL
                     YSTDASTFSTLMFVTRVNDIESLKKIVDLTGVVDLDEQDENGYSAVMVAAINGHVEAF
                     RLLVNAGANVNLQNKYGETGISLSEAHIDCGAFEKVIHEYGVMKGTPNSCNNGFYTLH
                     RAVCRGDYDAVESLTNSENDINAPDSDGHTPLMLAAREGHGKICELLISNGAICDIEN
                     ARHETALKLSRVNGVGNDAEGVLLDHMARGLVSSGGRVKKHCNEGKGSPHNKSLVMVE
                     GSGILRWGKSSRRNVVCKRAEVGPSSSFRWNRRKKNDGDEAGLWNRRKKNDGDEAGLF
                     RVITTKNKEVHFVCEGGVEVAELWVRGIKLVTKEAIFGK"
     misc_feature    88..>447
                     /gene="LOC139842350"
                     /note="ankyrin repeat protein; Provisional; Region:
                     PHA02874"
                     /db_xref="CDD:165205"
     misc_feature    <271..>807
                     /gene="LOC139842350"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    283..369
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    order(292..297,304..312,316..321,331..333,340..342,
                     367..369,373..375,379..381,400..408,412..417,427..429,
                     436..438,463..465,469..471,544..546,556..561,577..585,
                     589..594,604..606,613..615)
                     /gene="LOC139842350"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    373..465
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    469..633
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    670..771
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    <901..1473
                     /gene="LOC139842350"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    order(946..948,952..954,964..969,976..984,988..993,
                     1003..1005,1012..1014,1039..1041,1057..1059,1063..1065,
                     1075..1080,1087..1095,1099..1104,1114..1116,1123..1125,
                     1150..1152,1156..1158,1162..1164,1174..1179,1186..1194,
                     1198..1203,1213..1215,1222..1224,1249..1251)
                     /gene="LOC139842350"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    946..1041
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1057..1152
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1156..1251
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1255..1467
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    <1315..1959
                     /gene="LOC139842350"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    order(1471..1473,1477..1479,1489..1494,1501..1509,
                     1513..1518,1528..1530,1537..1539,1564..1566,1570..1572,
                     1576..1578,1696..1701,1708..1716,1720..1725,1735..1737,
                     1744..1746,1771..1773,1777..1779,1783..1785,1795..1800,
                     1807..1815,1819..1824,1834..1836,1843..1845,1870..1872)
                     /gene="LOC139842350"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:293786"
     misc_feature    1471..1566
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1570..1773
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    1777..1872
                     /gene="LOC139842350"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
ORIGIN      
        1 atgacggtgt acaactccgg tgggtccaca ttcggtgccg gatacttggc cgtgaagcaa
       61 gtatttccgg tagaagatta cgaagaaaag atctcacaac gccttgtgga agctgcacat
      121 gttaatgatc agaaggttgc atttgaatgc ttagcagata cttttgttga tgtaaacttt
      181 gttggaactg tgtgtttaaa ttcaaaaaag actgagattg tgttacatga tgagtctgca
      241 gccgaggttc gattcgagtt tcaagagttt aaaactgatg ttaccgcttt gttccttgct
      301 gctcattctg gaaatgcgac actcgttaaa aagttactga gctttggggc taatgtaaac
      361 aagaaattgt tccgtggata cgcaacgacg gccgcagtta ggggaaacca tgttgagata
      421 ctagagttgt tacttgaagc tggagcgtct caacttgctt gtgaagaggc tttgatcgaa
      481 gctagccaca tcggttcagc cagaccggct aaaactttaa taaaatccga cctcattcgt
      541 cctaacgttg cagttcatgc tttagtcatc gcatcgtgta gaggatttgt ggatgttgtt
      601 gacacacttt taaattgtgg aatagacatc aatggaacgg cgcgagtttc gcttcggtca
      661 tccaagcctt ttctgcatac cgatgtgact tgtaacgctc ttgttgccgc cacagttaat
      721 aggcacatct ccgttgttcg gcttcttttg caggccggtg cgagaaccga cagcaaggtg
      781 agcctaggag catggtcatg ggacatgacc acgggagaag aatttcgagt aggtgcggga
      841 ctagctgagc catacagtgt tacatggtgt gcggttgaat attttgaaga aaccggtaca
      901 atcttaaaca tgctactgca atatatctcc ccaaacgttc ctcatttcgg acgatcaatt
      961 atccatcatg ctatagtttg tgcaaatcta aaagcggttg atgttttatt aaaatgtggt
     1021 gctgacccgg agctaccggt tcaaaccatc catggaagtg ggttccggtt aatccatttg
     1081 gctgcaacgt taggttatca cggggttctg aaccacttgg ttgacgcaag ttgtaatctt
     1141 gactcgagaa cagaaacagg ggagaccgcg ttaatgatat gtgtgagaca taaatatgtt
     1201 gactgtatta agctcttagc aggatcaggt gctgattttg ggctggttaa taaggctaac
     1261 caatgtgttc agtcaattgc tggatcggtt agatggacac tcgggttaag gcaagtcatt
     1321 ttagaggtgg ttcgatccgg gaagattctt tactcgaccg atgcttcaac attctccact
     1381 ttgatgtttg ttacacgagt aaacgatatc gaatcgttga aaaagattgt tgacctaaca
     1441 ggtgttgttg accttgatga acaagatgaa aacgggtact cggcggttat ggtagctgct
     1501 ataaatgggc acgttgaggc gtttcggttg cttgttaacg caggcgcaaa tgttaacctt
     1561 caaaacaagt atggtgaaac cggaattagt ttatccgaag cacatatcga ttgtggtgca
     1621 tttgaaaagg ttatacacga atatggagtt atgaagggta cgcccaactc gtgtaacaat
     1681 ggattttaca ctcttcatcg tgcagtttgt aggggcgatt atgatgcagt ggaatcgtta
     1741 acaaatagtg aaaatgacat aaatgcccct gatagtgatg gacacacgcc acttatgtta
     1801 gccgcgagag aaggacacgg gaaaatatgt gagcttttga tctcaaacgg tgcaatttgt
     1861 gacattgaaa atgcaagaca cgagaccgca cttaagttat cgcgtgtaaa tggtgtcgga
     1921 aacgatgctg aaggggtgct actagaccat atggctcgtg ggctcgtttc aagtgggggt
     1981 cgggtcaaga aacattgtaa tgagggtaaa gggagtccac ataacaaaag tttagttatg
     2041 gttgaaggga gtggaatttt gagatggggg aaatcgagta gacggaatgt tgtttgtaaa
     2101 cgggctgagg tgggtccgag ctcgtcgttt aggtggaacc ggaggaagaa aaatgatggt
     2161 gatgaagccg ggttgtggaa ccggaggaag aaaaatgatg gtgatgaagc cgggttgttt
     2221 cgggtgataa caactaagaa caaagaggtg cattttgttt gcgagggtgg tgttgaggtt
     2281 gctgagttat gggttagggg gattaaactt gtgacaaaag aagctatttt tggaaagtaa
//
LOCUS       XM_071832501            1278 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842351), mRNA.
ACCESSION   XM_071832501
VERSION     XM_071832501.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1278
                     /gene="LOC139842351"
                     /note="uncharacterized LOC139842351; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139842351"
     CDS             1..1278
                     /gene="LOC139842351"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688602.1"
                     /db_xref="GeneID:139842351"
                     /translation="MSSSSSSSHDDYTNYTLNLLDQVDESSNDGVNSRLYVRRDHYNA
                     HNRLMEDYFDEGCKYTEDQFKRRFRMRRRVFLRVMNDILNYDVNPLPTHFIWFHRRQD
                     SRGMWSISPHLKITAALRQLAYGYTPDALDEYLQMSERVGRESLLNFTMCIIDLYNTD
                     YLREPSLHDIQRLYEAHERIHGFPGMLGSIDCMHWAWAKCPVAWRGQFMRDDHSHPTI
                     MLEAVASYDNWIWHAYFGVFGSLHVAGSNNDLNVLNTSDLFNSMLNEDMPDVPFIANG
                     VEYKSGYYLADGIYPTWASFVKGFSSAVDEKRTHFSRQQAAARKDVERTFGILQGRWH
                     ILQQPARAYASNQMRRLMYTCIILHNIIIEDNGYNLAENDWVYEPLQHIQRTWIERCD
                     ARARRTRELRDREVHEGLRSDLVEHLWALREFN"
     misc_feature    481..1101
                     /gene="LOC139842351"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcttcat cttcgagtag ttcgcacgat gattacacaa attatacgct caatttactt
       61 gatcaagttg atgaatcttc gaacgatggt gttaattctc gtctttacgt tcgtcgtgat
      121 cattataatg ctcataatcg tttgatggag gattactttg atgaggggtg caaatatacg
      181 gaagatcaat tcaaacgtcg ttttcggatg cgtcgccgtg tttttcttcg agtgatgaac
      241 gatatactca actatgatgt caatccattg cctacccatt ttatatggtt tcatcgaagg
      301 caagattctc gcggtatgtg gagtattagt ccacatttaa aaatcaccgc cgcactccgt
      361 cagctagcat acggctatac accggatgct ttagacgagt atttgcaaat gagtgaacga
      421 gttgggcgtg aatctttgct aaactttact atgtgcatta ttgacttgta taatactgac
      481 tacttaagag agccgtcttt gcatgacatt cagcgtttat atgaagccca tgaaaggatt
      541 catggcttcc cgggcatgtt gggtagcatc gattgtatgc attgggcatg ggcaaaatgt
      601 ccagttgcgt ggagaggcca atttatgcga gacgatcaca gtcacccaac cattatgctt
      661 gaagccgtcg cgtcgtatga taattggatt tggcatgcgt attttggtgt gttcgggtca
      721 ctacatgtgg cgggttcaaa caacgactta aatgttttaa acactagtga tttgttcaac
      781 tcaatgctca atgaagatat gcccgacgtc ccttttattg cgaatggcgt ggaatacaaa
      841 agtgggtatt atttagccga cgggatttat ccaacatggg cttcatttgt gaagggattt
      901 tcaagtgccg ttgatgaaaa acgcactcac ttttcaaggc aacaagctgc tgctcgcaaa
      961 gatgtggaaa gaacttttgg gattttacag ggtcgttggc atattctaca acaacccgca
     1021 agggcatacg cgagtaatca aatgagaagg cttatgtata cgtgcatcat actacacaac
     1081 atcattattg aagacaatgg ttacaacctt gccgagaatg attgggttta tgagccgctt
     1141 caacacatac aacgtacttg gatcgaaagg tgtgacgctc gtgctagacg aacaagggag
     1201 ctacgtgata gagaagtgca cgaaggctta cgatcggatt tggttgaaca tttatgggct
     1261 cttcgagaat tcaattaa
//
LOCUS       XM_071832502             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glyceraldehyde-3-phosphate
            dehydrogenase GAPC2, cytosolic-like (LOC139842353), mRNA.
ACCESSION   XM_071832502
VERSION     XM_071832502.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139842353"
                     /note="glyceraldehyde-3-phosphate dehydrogenase GAPC2,
                     cytosolic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139842353"
     CDS             1..447
                     /gene="LOC139842353"
                     /codon_start=1
                     /product="glyceraldehyde-3-phosphate dehydrogenase GAPC2,
                     cytosolic-like"
                     /protein_id="XP_071688603.1"
                     /db_xref="GeneID:139842353"
                     /translation="MCASSSFTASDKKIKIGINGFGRIGRLVARVALQRDDIELVAVN
                     DPFITTDYMTYMFKYDTVHGQWKHHELKVKDEKTLLFGEKPVSVFGFRNPEEIPWGAA
                     GADFVVESTGVFTDKDKAAAHLKPIYYVSVCSVFMQEDELIWIGYV"
     misc_feature    28..>375
                     /gene="LOC139842353"
                     /note="glyceraldehyde-3-phosphate dehydrogenase; Region:
                     PLN02358"
                     /db_xref="CDD:165999"
ORIGIN      
        1 atgtgtgctt catcttcatt cacagcatct gacaaaaaga tcaagatcgg aatcaacgga
       61 ttcggaagaa tcggtcgttt agttgcgaga gttgcacttc agagagatga tattgagctt
      121 gttgctgtta acgatccgtt tattactact gattacatga catacatgtt caagtatgac
      181 actgttcatg gccaatggaa gcatcatgaa cttaaggtca aggatgagaa aacacttctc
      241 ttcggtgaga agcctgttag tgtttttgga ttcagaaacc cagaagagat cccatggggt
      301 gctgccggag ccgactttgt ggtcgagtcc accggagtgt ttacagacaa ggacaaggct
      361 gctgcccact tgaagccgat ttattacgta tctgtttgtt cggtttttat gcaagaagat
      421 gaactgattt ggattggtta tgtatga
//
LOCUS       XM_071832504            2076 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ent-copalyl diphosphate
            synthase, chloroplastic-like (LOC139842355), mRNA.
ACCESSION   XM_071832504
VERSION     XM_071832504.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2076
                     /gene="LOC139842355"
                     /note="ent-copalyl diphosphate synthase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139842355"
     CDS             1..2076
                     /gene="LOC139842355"
                     /codon_start=1
                     /product="ent-copalyl diphosphate synthase,
                     chloroplastic-like"
                     /protein_id="XP_071688605.1"
                     /db_xref="GeneID:139842355"
                     /translation="MDEGEISPSAYDTAWVALIEDVNGLRGGPQFPSCLQWIVNHQLP
                     DGSWGEPMLFSAFDRLLNTLACVIALTTWNIDSDKCQKGMKFVDENMNKLGDEKVEHM
                     TPGFEIVFPSLIELAQKLKIKVPNNSPILNEINARRDLKLAKIPKELFHKIPTIMLYS
                     LEGMKDLEWDKLLKLQSEGGSFLFSPAATAFAYMQTKDPNCLAYLTNTVAKFNGRVPT
                     AYPVDMYERIWIVDRLQRLGITRYFRFEIKDCVEYIHRYWDEKGIGFARNCNVPDLDD
                     TAMAFHVLRTNGYYISPDVFLHFKKDGQFGCYPGQSTETVTVMLNLLRASQLLFPGEN
                     ILNDAKTFSRKFLTEKQSANQLLDRWLITKDLPGEVRYVLNVPWYASLPRLEARYYLE
                     QYGGEDDIWLAKTLYRMKNVCNNKYLEMAKLDYNHCQTIHQLEWRYIQKWYANLKIDE
                     SLDTKVLWSYYEAAASIFEPERRNERVSWAKTVVLINIITSFFARPQFTNADIRAFAD
                     EFSNPQRHQKDGKPWHMITDELHKTLDHITSETGLAHGIHIRLHLHHVWTLWLLSWQK
                     EVDVVSGEAELIVQTIIMSSGRWLPEETLSHPQYRRLCSIINDLFRHLSHKVHSQKNN
                     KMIILVSEAESKMQELVQLVLCNSPNDLDPDLKQIFLIVAKTFYYRAYFDCETISIHI
                     SKVLFENVV"
     misc_feature    1..2073
                     /gene="LOC139842355"
                     /note="ent-copalyl diphosphate synthase; Region: PLN02592"
                     /db_xref="CDD:215321"
ORIGIN      
        1 atggatgaag gtgagataag tccttcagct tacgacacag cttgggttgc acttattgaa
       61 gatgtcaatg gattaagggg tggaccacag tttccatcat gtctacaatg gatcgtgaat
      121 catcagctcc ctgatggctc atggggtgaa ccaatgcttt tttcagcttt tgataggctc
      181 ctcaacacat tggcttgtgt gatcgcgcta accacttgga atatagattc cgataagtgt
      241 caaaaaggga tgaaatttgt ggacgaaaat atgaacaagc ttggggacga aaaggttgaa
      301 cacatgacac ctggtttcga aatagtcttc ccttcactca ttgaactcgc acaaaaatta
      361 aaaattaaag tgcctaataa ttctcccatc ttgaatgaga tcaatgcaag acgagaccta
      421 aagctcgcaa agataccaaa ggagctattt cacaagattc caacaatcat gctttatagc
      481 ttggaaggga tgaaagattt agaatgggac aagcttctaa aacttcaatc ggaaggcgga
      541 tctttcctct tctcaccggc tgcaacggct ttcgcatata tgcaaactaa ggatccaaat
      601 tgtcttgcat atttgaccaa cactgttgcc aaattcaatg gaagagtccc aactgcatac
      661 cctgttgaca tgtatgaacg gatttggatc gttgatcgct tgcaacgcct tggaatcaca
      721 cgttattttc gttttgagat caaggattgt gttgaatata tacacaggta ttgggatgaa
      781 aaaggcattg ggtttgcgag aaattgcaat gtaccggatc ttgatgacac tgcaatggct
      841 tttcatgtct taagaacgaa cggttattat atttctcctg atgtattttt gcactttaag
      901 aaagatggac agttcgggtg ttatccggga cagtcaacag aaactgtgac cgttatgctc
      961 aatctacttc gagcttctca gctgctattt ccaggagaga atatccttaa tgatgccaag
     1021 actttttctc gtaaattctt gaccgaaaaa caatcagcca atcaactttt ggacagatgg
     1081 ctcattacca aagacttgcc cggcgaggtt cgatatgtgc tgaatgtgcc atggtacgct
     1141 agcctacctc gccttgaggc aagatactat ttggagcagt atggaggaga agacgacatt
     1201 tggctagcga aaacccttta taggatgaag aatgtttgca ataacaaata tcttgagatg
     1261 gccaaactag actacaatca ctgtcaaaca attcatcagt tggaatggag atatattcaa
     1321 aaatggtatg cgaatctaaa aattgatgag agcttagata caaaggttct atggtcatat
     1381 tatgaggcag cagcgagcat attcgagcca gaaagacgta atgagcgagt ttcttgggcc
     1441 aaaacagtcg tgctgatcaa catcattacc tccttctttg cgagacctca attcacaaac
     1501 gctgacatta gagcatttgc tgacgaattc tcaaaccctc aacgtcatca aaaagatgga
     1561 aaaccttggc acatgataac ggatgagctg cacaaaactc tcgaccatat tacatctgaa
     1621 acggggttgg ctcatggtat acacatccgc ctacacctac accatgtttg gacattgtgg
     1681 ctcttgagct ggcaaaaaga agtggatgta gtgtcaggag aagccgaact catcgttcaa
     1741 actataatta tgagcagcgg tcgatggcta cctgaggaga ccttgtctca ccctcaatat
     1801 cgacgactgt gttccatcat aaatgacctt tttcgccatt tatctcataa ggtacactca
     1861 cagaaaaata acaagatgat catactagtc tctgaggccg agtccaaaat gcaagaactt
     1921 gtgcaactcg tactctgcaa ctcacccaac gatcttgatc ctgatttgaa acagatattt
     1981 ttaattgttg ccaaaacgtt ttactataga gcctactttg attgtgaaac tataagcatc
     2041 cacattagca aagtattatt tgaaaatgtg gtttga
//
LOCUS       XM_071832505            1458 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842356), mRNA.
ACCESSION   XM_071832505
VERSION     XM_071832505.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1458
                     /gene="LOC139842356"
                     /note="uncharacterized LOC139842356; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842356"
     CDS             1..1458
                     /gene="LOC139842356"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688606.1"
                     /db_xref="GeneID:139842356"
                     /translation="MKLDLSTKNKVGFIDATCVKNNDNPVLATSVVWNELQETYDKVD
                     GSNIFNLHIKINSLKQNGVPISDYYHNLNTLWKQYDEMVKIPACTCAASNESKEHTKI
                     LRLNQFLMGLDDDFMQIRSNILLRDPIPNVKTTFAVIYREESHRKISSNHSSNKSQNS
                     AFLSHFKSNNSGNTGSTQSYNKFKKGPNPKLKCNKCNKIGHTIDMCFEIIGYPSGYKR
                     TPQNNNNRSISSNNVVTTNNASSVSDMPSTSTSSPLSLTNDQMAKLLNLLNESSVQSS
                     NACSNMEDSGANQHMTVSENSLFNVVDISDFNLKVSHPNGTEARVNKIGNLQLTYKIV
                     LYDVLVVPGYYVSLLSVSKLAADSGFDIKKHPDDWVTSKEGFRYFLTIVNDYTRAVWS
                     MGMIHQTTIPYTPQQNEVVERKHRHLLNVARSLMFQGEIPLTMWPECVLTATYLINRT
                     PSKILAGKTPFELFHPKSEKAVFIGYSNSKKGFKL"
     misc_feature    94..441
                     /gene="LOC139842356"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgaaacttg atttatctac taaaaataaa gtagggttta ttgatgctac ttgtgttaag
       61 aataatgata atcctgtgct tgctacttct gttgtttgga atgaattgca agaaacttat
      121 gataaggttg atggatccaa tatttttaat ttacacatta aaataaattc tttaaaacaa
      181 aatggtgttc caatttctga ttattatcac aatcttaata ctctttggaa acagtatgat
      241 gagatggtca aaattcctgc ttgtacttgt gctgcttcta atgaatcaaa agagcatact
      301 aaaattttga gattaaatca atttcttatg ggattggatg atgattttat gcagattaga
      361 agcaatattc ttctaagaga tccaattcct aatgttaaaa ctacttttgc agttatatat
      421 agggaagaat ctcatagaaa aatttcctct aatcattcat ccaataaaag tcaaaattct
      481 gcttttctgt ctcattttaa aagcaacaat tcaggaaata ctggatcaac tcaatcttat
      541 aataagttta agaaaggtcc taatcctaaa cttaaatgta ataagtgtaa taagattggt
      601 catactattg atatgtgttt tgagattatt ggttatccat ctggttataa aaggacacct
      661 cagaataata ataacagatc aattagtagt aataatgttg taactactaa taatgcttct
      721 tctgttagtg atatgccttc cacttctact tctagtcctc tttctttaac caatgatcaa
      781 atggctaagc ttctgaattt gttgaatgag tcatctgtgc agtcatctaa tgcttgttct
      841 aatatggaag attcaggagc gaatcaacac atgactgtgt ctgaaaatag tctttttaat
      901 gtggttgata tttctgattt taatcttaaa gtttctcatc ctaatggtac agaagctaga
      961 gtaaataaaa taggaaattt acaacttaca tataaaattg ttttatatga tgtgttggtt
     1021 gttcctggat attatgtatc tttgttatct gttagtaaat tagctgcaga tagtggattt
     1081 gatatcaaga aacaccctga tgactgggtt actagcaaag aagggtttag gtattttttg
     1141 accattgtga atgattatac tagggctgtt tggtccatgg gtatgattca tcagaccact
     1201 attccttata ctcctcaaca aaatgaggta gtagagagga aacatagaca ccttcttaat
     1261 gttgctagat cccttatgtt tcagggggaa attcctctta ctatgtggcc tgaatgtgtg
     1321 ttaactgcta cttatttgat taacaggaca ccctccaaga ttctagctgg caaaactcct
     1381 tttgaactgt ttcatcctaa atctgaaaaa gctgttttta ttgggtattc taattcaaaa
     1441 aaaggtttca agctttga
//
LOCUS       XM_071832506            1161 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842357), mRNA.
ACCESSION   XM_071832506
VERSION     XM_071832506.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1161
                     /gene="LOC139842357"
                     /note="uncharacterized LOC139842357; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842357"
     CDS             1..1161
                     /gene="LOC139842357"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688607.1"
                     /db_xref="GeneID:139842357"
                     /translation="MWFWEKEEISKGCNASFVTLIPKKKDSITLGDYRPKKKCKSFVF
                     KANFEKAFDSVNWNYLADIMRLMGFGSKWIKWIKACFKSASMSILVNDSPTREFSLER
                     GIRQGDPLSPFLFLIAGEGKWEERNVQNIMNVLECFERDSGLKINNSKSTIYGIGVNV
                     NEVELTAARFGCKAGSFPIMYLGLSVGLKMNKLNDWKPVVKNFQKRFAGWKNSVISNL
                     DIPFNESFVRIIGDGRKTLFWDDLWIGDQRLKDKYPRLYRLEAVKDVRVGDKIIKTDS
                     ESIFSWSWTRAVSGRTNDKFEQLQNDLNELQCSGNSEDTWKWQWHNSGNFSTYEIALL
                     IDEKISQMTSQGYETVRNNLFPKKVEIFTWRSIRKQIPTRIELDKNMSISTR"
     misc_feature    43..552
                     /gene="LOC139842357"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(139..156,316..318)
                     /gene="LOC139842357"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    319..321
                     /gene="LOC139842357"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgtggtttt gggaaaaaga ggagatttct aaagggtgca atgcctcatt cgtcacgtta
       61 attccaaaaa agaaagactc gattactctt ggtgattata ggccgaaaaa gaagtgcaaa
      121 agttttgttt ttaaagcgaa tttcgaaaag gcatttgata gtgtcaattg gaattatctt
      181 gccgacataa tgagattaat ggggttcgga tccaagtgga tcaagtggat aaaggcgtgt
      241 ttcaagtcag catccatgtc aattttagtc aatgattctc ctacacgtga gttttcatta
      301 gaaaggggta taaggcaagg agacccgtta tcgccattct tgtttttaat tgcaggagaa
      361 ggtaaatggg aagagaggaa tgtacaaaat ataatgaatg ttttggaatg ttttgaaagg
      421 gattcggggc tgaaaataaa caattcaaaa agcacaatat atggcatcgg ggtaaacgta
      481 aatgaagttg aattaactgc agcccgtttc ggatgtaagg cgggctcatt ccctattatg
      541 tatttgggtt tatcggtagg attaaaaatg aataaattga atgattggaa accggtggtt
      601 aaaaatttcc aaaaaagatt tgcggggtgg aagaatagtg tcatctctaa tcttgacatt
      661 ccctttaatg aatcttttgt gagaattatt ggagatggta ggaaaacgct attttgggat
      721 gatctttgga ttggtgatca acgtttgaaa gacaaatatc caaggcttta tagattggaa
      781 gcggtgaaag acgttcgagt tggagacaaa atcattaaaa cggattcaga atccattttt
      841 tcttggagct ggacgcgtgc agtttctggt agaacaaatg acaaatttga acagctgcaa
      901 aatgatctta atgagctgca gtgttcagga aatagcgagg acacttggaa atggcaatgg
      961 cataacagtg gtaacttcag cacctatgaa attgctttat taattgatga aaaaatctcg
     1021 cagatgacat cacaaggtta cgaaacagta agaaacaatt tatttccaaa gaaagtggag
     1081 atattcacgt ggaggtcaat tagaaaacag attccaaccc gaattgagct tgacaaaaat
     1141 atgtcgatct caactcgatg a
//
LOCUS       XM_071832507            1650 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842358), mRNA.
ACCESSION   XM_071832507
VERSION     XM_071832507.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1650
                     /gene="LOC139842358"
                     /note="uncharacterized LOC139842358; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842358"
     CDS             1..1650
                     /gene="LOC139842358"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688608.1"
                     /db_xref="GeneID:139842358"
                     /translation="MPGGSNTRQNCTYKEFMACKPLPFKGTEGPVGLTHWIEKMESVF
                     SISNCAQANWVKFATSTLEGKFLTWWNSIARPMGLEAAHAIPWEDIKTRMTAEYCPDN
                     EVKKMEAELWDLKVVGTDLATYTNRYLELILLCPGMVPTERKKIDRYVKGLSENIQAS
                     VHASKPQTLQETINMANDLMDQITQRTAAEVKSGDNKRKWTGNSNSQSSKKQEVSGKG
                     YQGKALYCSRCERHHEGRCTVTCGNCKKIGHMTKNFWTKTTGTANPPAANTSTVKTCY
                     ECGQKGHFKNECQNKKGPEKGRGRAFNINAHEASEDPDLLSGTFLLNNHIVSVLFDCG
                     ANRSFVSIESSCMLDKTHVPIDTKYCIELVNGKLMKANKINKDCTLVLEGKPFLVDLM
                     PIEIGSFDVVIGMDWLSKNRAEVMCFEKAIRIPLDNGENLMVYGDKTGVKLNLISCMK
                     AQKYLRKGYQAILAHVKKIETEERRIEDVPIVREFPNVFPEELPGLPPRRLVEFHIDL
                     VSGAAPVAPSPYRLAPSELKELSNQLQELLDRGFIRPSSSP"
     misc_feature    166..465
                     /gene="LOC139842358"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <661..939
                     /gene="LOC139842358"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    889..1266
                     /gene="LOC139842358"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(994..996,1000..1002,1006..1008,1081..1089,
                     1204..1206)
                     /gene="LOC139842358"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    994..1002
                     /gene="LOC139842358"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    994..996
                     /gene="LOC139842358"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1081..1092,1102..1113)
                     /gene="LOC139842358"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgcctggag gctcgaacac gagacaaaac tgcacttaca aggagtttat ggcttgtaag
       61 ccactaccat tcaaaggcac tgaaggacca gtgggtctaa cccattggat tgagaagatg
      121 gagtcggtgt ttagtattag taactgtgct caagctaact gggtaaagtt tgctacttcc
      181 acactagaag gtaaattttt gacctggtgg aattctattg ctcgacctat gggtcttgag
      241 gctgctcatg ccatcccttg ggaagacatc aaaacccgta tgactgctga gtattgtccc
      301 gataatgaag ttaagaagat ggaggctgag ttatgggatt taaaggttgt tgggactgat
      361 cttgctactt acactaaccg ctatttggaa ttgattctgc tgtgtccggg tatggtccca
      421 actgaaagga agaaaatcga ccgctatgtt aagggtctct ctgaaaatat tcaagctagt
      481 gttcatgctt ctaaacccca aactttgcaa gagaccatta atatggcaaa tgatctcatg
      541 gatcaaatta ctcaacggac tgctgctgag gtgaagtctg gggataataa gaggaagtgg
      601 actggaaatt ctaactccca gtcatccaaa aagcaggaag tttctggaaa agggtatcaa
      661 ggaaaagctc tatattgttc aaggtgtgag agacatcatg aaggaagatg cactgtgact
      721 tgtgggaatt gcaagaaaat agggcacatg accaagaact tttggacaaa gactactggt
      781 actgcaaatc ctcctgctgc taatactagt actgtgaaga cgtgttatga gtgcggtcag
      841 aaggggcatt ttaagaatga gtgtcaaaac aagaaaggac cagagaaagg aagaggaaga
      901 gcatttaata tcaatgctca cgaggctagt gaggaccccg acttgctttc tggtacgttt
      961 cttctaaaca atcacattgt ttcagtactg tttgattgtg gtgcaaatag aagtttcgta
     1021 tccatagaat ctagttgcat gcttgataaa actcatgtac ccatagacac taagtactgt
     1081 attgaactgg tgaacggtaa acttatgaag gctaataaaa tcaacaaaga ctgtacctta
     1141 gttttagaag gaaaaccatt tttggtggac ctaatgccta ttgaaatagg aagctttgac
     1201 gtagtaatag gaatggactg gttgtctaag aatagagccg aagtcatgtg tttcgagaag
     1261 gcgattcgta taccccttga taatggggag aatttgatgg tttatggaga taaaactggc
     1321 gtaaaactta acctgatttc gtgcatgaag gcacaaaagt atctgaggaa aggctatcaa
     1381 gcaatcctag cacatgtgaa aaagattgaa actgaagaaa ggcgaattga agatgtaccg
     1441 atcgttagag aattcccaaa tgtctttccc gaagaactac ctggtcttcc tcctcgtaga
     1501 ttggtagaat tccatataga tctcgtatcc ggagctgcac cagttgcacc atcaccatat
     1561 agattggcac catcagaact aaaagagttg tccaaccaat tgcaagaatt gttggataga
     1621 ggtttcattc gaccaagctc atctccgtga
//
LOCUS       XM_071832508             675 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842360), mRNA.
ACCESSION   XM_071832508
VERSION     XM_071832508.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..675
                     /gene="LOC139842360"
                     /note="uncharacterized LOC139842360; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842360"
     CDS             1..675
                     /gene="LOC139842360"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688609.1"
                     /db_xref="GeneID:139842360"
                     /translation="MLEAIASYDLWICHAYFGPTGSNNDINVLNQFDLFKELLEDRAP
                     LCNYMVNGKHFTKGYYLADGIYPDWTTLVKSFKSTVEPKTSKFKRYQEAARKDIECAF
                     GVLQGRFAIIKSPARQFYIEKIQSIMYTCVILHNMITEDNCQAFCGLEEDYQPVRRAL
                     TIRERFDTHLRMDKEIRDSTIHRFLRDMLIEHIWSLRPNARIRYNSQEDLRQFPDMSM
                     MCRPLV"
     misc_feature    <4..423
                     /gene="LOC139842360"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgttggaag cgattgcctc gtatgatttg tggatttgcc acgcttactt tggaccaact
       61 ggttcaaata atgatatcaa tgtgttaaac caattcgatt tatttaaaga gttacttgaa
      121 gatagagctc cactgtgtaa ctatatggtg aatggaaaac attttacaaa aggctattat
      181 ttagcggacg ggatttatcc tgattggacg acacttgtga aatcgttcaa aagtacggtt
      241 gaaccaaaaa catcaaaatt caaaaggtac caagaggcag caagaaagga tatcgaatgc
      301 gctttcggtg tacttcaagg tcgttttgca atcattaaaa gtcctgcaag acaattctat
      361 atcgagaaaa tccaaagcat tatgtatacg tgtgtgattt tacacaacat gataactgaa
      421 gataattgtc aagctttttg tgggttagaa gaggattatc agccagttcg tcgtgcatta
      481 acaatacgag aaaggtttga tacacatttg cgaatggaca aagaaatacg cgattctacc
      541 attcatcgtt ttctccgaga catgcttatc gaacacattt ggagtttacg acctaatgca
      601 cgtattagat ataactcaca agaagacctt cggcaattcc cggacatgtc aatgatgtgt
      661 agacctttag tatga
//
LOCUS       XM_071832509             597 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842361), mRNA.
ACCESSION   XM_071832509
VERSION     XM_071832509.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..597
                     /gene="LOC139842361"
                     /note="uncharacterized LOC139842361; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842361"
     CDS             1..597
                     /gene="LOC139842361"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688610.1"
                     /db_xref="GeneID:139842361"
                     /translation="MVLRVQKVQLVANQFSGSFEAHDPSMQKYLQLLKETAAQFEHFE
                     LAQVPRSQNKKADALSKLAALTFSHFQKQVWVEELPSKSIESDLMVASVTEEQPNWME
                     PILKYIRSNILPEDSREARSVRERAPMYIIQDDILYRKLYCGPMMRCVGPIEAEMIVE
                     EVHNGTCALHSGSYKLADMEGRTLPNAWHAVLLKRYYA"
     misc_feature    <25..192
                     /gene="LOC139842361"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggtgcttc gtgtgcagaa ggtgcagtta gtagcgaatc agtttagcgg atcttttgaa
       61 gcacatgatc cttctatgca aaagtacttg cagctattaa aggaaactgc agcgcagttt
      121 gagcattttg aacttgcgca ggtgccaaga agtcaaaaca agaaagcgga tgctttgagc
      181 aaattagccg ctttaacttt ttcgcatttt caaaagcaag tatgggtcga agaattacca
      241 agtaagtcta tagaaagtga cttgatggtc gcatctgtta cagaagaaca gccaaactgg
      301 atggagccaa tcctaaaata tatccgcagt aatatcttgc cagaggatag tcgcgaagct
      361 cgttcagtgc gagagcgggc gccaatgtat atcattcaag atgatatctt atatcgcaaa
      421 ttatactgcg gaccaatgat gcgatgtgtt ggcccaatcg aggcagaaat gattgtagaa
      481 gaagtgcata acggtacttg tgcactgcat tcaggatcat ataagctcgc agatatggaa
      541 gggcgaactt tacctaatgc atggcatgct gttttgttaa agcgatatta tgcatag
//
LOCUS       XM_071832511             978 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842363), mRNA.
ACCESSION   XM_071832511
VERSION     XM_071832511.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..978
                     /gene="LOC139842363"
                     /note="uncharacterized LOC139842363; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139842363"
     CDS             1..978
                     /gene="LOC139842363"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688612.1"
                     /db_xref="GeneID:139842363"
                     /translation="MAYSSSDDEYTMLALEMLEADQSDEGDSSNVRLTRRYIRRDHHE
                     AHDRLIRDYFAEHPKYSKVEFKRRFRMRRRVFNRIMEGILNFSANRLPKYFEWFHVRP
                     DARGELGISTHLKITAALRQLAYGYTPDALDEYLQMSERVARESLQNFTKCIVVLYSN
                     DYMREPTREDMERLYEVHEEKHDFSGMLGSIDCMHWVWGKCPVAWQGQFKRGDHSHPT
                     IMLEAVASYDNWIWHAYFGVAGANNDINVLNTSPLFESMLNDNFPDIPYVINGVEYKM
                     GYYLADGIYPQWASFVKAYSSAADPKSKYFSRKQSKATKDVERTFGLIR"
     misc_feature    484..>972
                     /gene="LOC139842363"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcttatt catcttccga cgatgagtat acgatgcttg cactcgaaat gttagaggcc
       61 gatcaaagtg atgaggggga tagttctaat gttcgtttaa cgcgacgcta tatcagacgt
      121 gatcaccatg aagcacatga tcgcctcata agagactatt ttgctgaaca tccgaagtat
      181 agcaaagtgg agttcaaacg tcgatttcga atgaggagac gtgtattcaa ccgaattatg
      241 gaaggtatat taaatttttc tgcaaatcgt ttacctaaat attttgaatg gtttcatgtt
      301 agacctgatg cccgtggcga gttaggcatt agtacacatt taaaaataac ggcggcactt
      361 cgtcagttgg catacggtta tacacccgat gcattagacg agtatttaca aatgtcggaa
      421 cgtgtagctc gtgaaagttt acagaatttt acgaaatgta ttgttgtttt atattcaaat
      481 gattatatgc gcgagcctac tcgtgaggac atggaacgtt tatacgaggt tcatgaggaa
      541 aagcatgact tttccggcat gctaggtagt atagattgta tgcattgggt ttggggaaaa
      601 tgtccggttg catggcaagg ccaatttaag cgaggagatc atagtcatcc aactattatg
      661 cttgaagccg ttgcctcgta tgataattgg atatggcatg cttattttgg ggttgctggg
      721 gcaaacaatg acataaatgt gttaaatacc agtcctttgt tcgaatcgat gcttaatgat
      781 aatttcccag acatccctta tgttattaat ggtgtggagt acaaaatggg ttattattta
      841 gcggatggga tttaccctca atgggcatcg tttgttaaag cgtattcgag tgcagctgat
      901 cccaagagta aatacttttc acgcaaacaa tctaaggcaa caaaggatgt tgagaggact
      961 tttgggctta ttcggtaa
//
LOCUS       XM_071832512             891 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein mak16-like
            (LOC139842364), mRNA.
ACCESSION   XM_071832512
VERSION     XM_071832512.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..891
                     /gene="LOC139842364"
                     /note="protein mak16-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842364"
     CDS             1..891
                     /gene="LOC139842364"
                     /codon_start=1
                     /product="protein mak16-like"
                     /protein_id="XP_071688613.1"
                     /db_xref="GeneID:139842364"
                     /translation="MQNDEVIWQCLRHNHCSYMSKITSGIFCQNPYNITGVCNRSSCP
                     LANSRYATIRDHDGVFYLYMKTIDRAHMPNKLWERIKLPRSYEKALEIIDTKLMYGPK
                     FIVHKAKQRLTKMTQMRIRMRKLALKTREKIITTPRKEKKRELRREEKAETAALIEKN
                     IERELIERVMKGRDDEIMNIDTERFIKLIEDLEGQEKDVNEDEIELETEYVEADYEDE
                     DEDAMEDFDGFPNKEGSDDDNSKSDDEYDAAVVVVDQKRGRPDSKYALKKQEKDAKRK
                     KRGVLMEVIADDDSPSVYST"
     misc_feature    1..609
                     /gene="LOC139842364"
                     /note="Protein MAK16 homolog; Provisional; Region:
                     PLN00040"
                     /db_xref="CDD:215038"
ORIGIN      
        1 atgcagaatg atgaagttat atggcaatgt ctcaggcata accactgcag ttacatgtcc
       61 aaaattacaa gtggtatatt ttgtcagaac ccctacaata taactggagt ttgtaaccgt
      121 agttcatgtc cactcgctaa tagtcgttat gctacaatcc gtgatcatga tggggtgttc
      181 tacttgtata tgaaaactat agacagagct catatgccaa ataagttgtg ggaaagaatt
      241 aaattgcctc gcagctatga aaaggcactt gaaattattg acacaaagtt gatgtacggg
      301 ccaaagttta tcgtacacaa ggcaaaacaa aggttgacta aaatgacaca gatgcggata
      361 cgtatgagga aacttgcgct taaaacaaga gagaagataa ttacgactcc tagaaaagag
      421 aaaaagagag aattgagaag agaagaaaag gcagaaacag cagcacttat agaaaagaat
      481 attgagaggg aattgattga gcgtgtgatg aaagggaggg atgatgaaat aatgaatatt
      541 gatacagaac ggttcataaa acttattgag gatctcgaag gacaagaaaa ggatgtaaac
      601 gaagatgaga tagagctgga aactgaatat gttgaagctg attatgagga cgaagacgaa
      661 gatgcaatgg aggattttga tggttttcca aataaagaag gctcggatga tgataatagt
      721 aagtcggatg atgaatatga tgcagcagta gtggtggtgg accaaaagag gggaaggccc
      781 gattccaaat acgctcttaa gaaacaggag aaagatgcta aaaggaagaa aagaggagtt
      841 cttatggagg taattgctga tgatgacagc ccatcagttt attcaactta a
//
LOCUS       XM_071832513             324 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842365), mRNA.
ACCESSION   XM_071832513
VERSION     XM_071832513.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..324
                     /gene="LOC139842365"
                     /note="uncharacterized LOC139842365; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842365"
     CDS             1..324
                     /gene="LOC139842365"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688614.1"
                     /db_xref="GeneID:139842365"
                     /translation="MDIQQSFTSVEYPQANGQVEVTNRDIVASIKARLDKCRQGWVDE
                     LQHVLWAHRTTPKDRINETPFSLVYGTEAVIPVEVLAPTERITTFDEQQNDGALRENL
                     NAFEE"
ORIGIN      
        1 atggatattc aacaatcgtt cacttctgtg gaatatccac aggctaacgg acaggtcgag
       61 gtcactaaca gggacattgt tgccagtata aaggctagac tagacaaatg ccgacaaggg
      121 tgggtggatg aactccaaca tgtactatgg gcacaccgga caacaccaaa agatagaata
      181 aacgaaaccc cattcagttt ggtatacggc actgaagcag tcatcccggt agaggtgctt
      241 gccccgaccg agcgaataac aacgttcgat gaacagcaaa atgatggagc attgcgagaa
      301 aacctaaacg cttttgaaga atga
//
LOCUS       XM_071832514             666 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842367), mRNA.
ACCESSION   XM_071832514
VERSION     XM_071832514.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..666
                     /gene="LOC139842367"
                     /note="uncharacterized LOC139842367; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842367"
     CDS             1..666
                     /gene="LOC139842367"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688615.1"
                     /db_xref="GeneID:139842367"
                     /translation="MWNDLSDILTYDGAMWVIFGDFNEVRFAYERKNTEFCERKAKMF
                     NDFIKDNSLLDLPLGGRTYTRISDNGTKFSKLDRFLVSENFIQQWPNANVLVLDKKHT
                     DHCPLFLKDGDIDFGPKPVKVFDEWLKQKYSHDVINAAWKSPVNSNKPDVIFREKLKI
                     VKQELRKWYSTSHGKLKVEIEELTNAINDWEKKAEVTNLDEEQLNKWMKDRESLTKKK
                     TCN"
     misc_feature    <4..330
                     /gene="LOC139842367"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgtggaacg atctttcaga tattttgaca tatgatggtg ctatgtgggt gatttttggt
       61 gatttcaatg aagttagatt cgcttacgaa agaaagaata ctgaattttg tgaaaggaaa
      121 gcgaaaatgt ttaatgattt tatcaaagat aactctctcc tcgatttgcc tttaggtggt
      181 agaacgtata ctcgcataag tgataacggt acaaaattca gcaagctcga caggtttctg
      241 gtatcggaaa atttcattca acaatggcca aacgcgaatg tgttggttct agataagaaa
      301 cacactgatc attgccccct gtttcttaaa gatggggaca tcgattttgg gcctaaaccg
      361 gttaaagttt tcgatgaatg gttgaaacaa aaatattcac atgatgtcat taatgccgct
      421 tggaagtcac cagtcaatag caacaaaccc gatgtaattt tccgagaaaa actaaagatt
      481 gtcaagcaag aacttcgaaa atggtactcc acgtcgcatg gtaaactaaa ggtggaaatt
      541 gaggaattaa ccaatgccat caacgattgg gaaaagaaag ctgaggtgac taatttagat
      601 gaagaacaat taaataaatg gatgaaagat cgtgaatctc ttactaaaaa aaaaacatgc
      661 aattag
//
LOCUS       XM_071832516            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842368), mRNA.
ACCESSION   XM_071832516
VERSION     XM_071832516.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139842368"
                     /note="uncharacterized LOC139842368; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842368"
     CDS             1..1077
                     /gene="LOC139842368"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688617.1"
                     /db_xref="GeneID:139842368"
                     /translation="MLFYLTTLNLARFLTETAPQVEGEQDAQTVSAVQAWSHSDFLCR
                     NYVLNGMVDSLYNVYCKTKTTKELWESLERKYKTEDAGTNKWVVAKFLEFMMIDSKTV
                     MSQVQELQVIIHDIHAEGMVISEGFQVAAVIEKLPPSWMDFKNYLKHKRKEMTVEDLV
                     VRLRIEEDNKVALKKSCTPSSAKVNVVEYGQSSRGNKGKGKAENKYKGKGSKLGPKGG
                     VMKNKFQGTCYNYDQPGHRASECKKLKKENSHQENMVEDVENLVAMISDLTVMISEVN
                     LVSSNTKEWWIDTGATRHVCADKSLFNTFKDVTSGEKLYMANSATADIKGEGNVILKI
                     VTPLKLIKLALVLLICLSLLIVSW"
     misc_feature    130..504
                     /gene="LOC139842368"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    676..729
                     /gene="LOC139842368"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
ORIGIN      
        1 atgctctttt atctgaccac gctgaacctc gcgaggttct taactgaaac cgctcctcaa
       61 gttgaagggg aacaagatgc tcaaactgtg agcgcggttc aggcttggag tcattctgat
      121 ttcttgtgcc gtaactatgt tttgaatggc atggttgatt cgctttataa tgtgtactgc
      181 aaaacaaaga ctaccaaaga attatgggag tctttagaac gcaagtacaa gactgaggat
      241 gcgggcacca acaaatgggt ggtggctaaa ttcttggagt ttatgatgat tgactcaaag
      301 actgttatga gtcaagtcca agaactgcaa gtcatcattc acgatataca tgccgaaggt
      361 atggtgatta gtgaaggatt ccaagttgca gcggtaatcg agaaattacc accaagttgg
      421 atggatttca agaattatct taagcataag cgaaaggaaa tgaccgtcga ggaccttgtg
      481 gtccgtcttc gaattgagga agacaacaaa gttgctctta aaaagagttg tacccctagt
      541 tcagcaaaag tgaatgttgt tgaatacggt caatcctcga gaggtaacaa aggcaaagga
      601 aaggctgaga ataagtacaa ggggaaaggg tctaagcttg gacctaaagg tggggtcatg
      661 aagaataaat ttcaaggcac gtgctataac tatgaccaac cgggtcatcg ggcgagtgaa
      721 tgcaagaagc tcaagaaaga gaactcgcac caagagaata tggttgagga tgttgaaaac
      781 ctcgtggcta tgatttctga cctcacagtg atgatctctg aggttaatct ggtttcctca
      841 aataccaaag agtggtggat tgatactggg gctactcgtc atgtttgtgc cgataagagc
      901 ctcttcaaca cctttaagga tgttactagt ggagaaaagc tctacatggc aaactctgcc
      961 actgctgata tcaagggaga aggcaatgtg atcttgaaga ttgtgacgcc cctgaagcta
     1021 ataaaactgg cattagttct gcttatttgc ttgagtcttc taattgtgtc atggtag
//
LOCUS       XM_071832517            1014 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            HBP-1b(c38)-like (LOC139842369), mRNA.
ACCESSION   XM_071832517
VERSION     XM_071832517.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1014
                     /gene="LOC139842369"
                     /note="transcription factor HBP-1b(c38)-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842369"
     CDS             1..1014
                     /gene="LOC139842369"
                     /codon_start=1
                     /product="transcription factor HBP-1b(c38)-like"
                     /protein_id="XP_071688618.1"
                     /db_xref="GeneID:139842369"
                     /translation="MRDIIVSPNRAPPIGVIQRGTRSEIVHASLHSSDLWRHCKIGEG
                     KINDPNDGEADVELPPEILLQTDGNSFENYTTKIMKAAKKREHVPLDNFQQPAKDVVD
                     AGSDLSEKLKLKRAKSAESSKRTRDRQKAYIEQIELLMQQQKKQIESLIEAQNEVSVD
                     SKADITNFGRFYRDWSYKFDNLIASLQRQIYVNSNPDHISPVIQIILNHIDLSNQQLE
                     KIELLKVQTIEQEKTITYQLNTLKDEISGLFAGSKFVDRGDHEAMSNFKNNMFEQIGR
                     LSAMAIYLTQADTLRTITYKKLQTVLTLTQIGIAFITVHKHVKRLHTWTNLWESKPNG
                     PNV"
     misc_feature    <46..>216
                     /gene="LOC139842369"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    334..468
                     /gene="LOC139842369"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; Region: bZIP; cd14686"
                     /db_xref="CDD:269834"
     misc_feature    334..468
                     /gene="LOC139842369"
                     /note="coiled coil [structural motif]; Region: coiled
                     coil"
                     /db_xref="CDD:269834"
     misc_feature    order(340..345,349..357,361..378,382..390)
                     /gene="LOC139842369"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
ORIGIN      
        1 atgcgtgaca ttattgtgtc tcctaataga gcacctccaa ttggtgttat acaaagagga
       61 acacgatctg aaattgttca tgcatcacta cattcttctg atttatggag acattgtaag
      121 atcggtgagg gaaaaataaa cgatccaaac gatggtgagg cagacgtaga attacctcct
      181 gaaattttgt tacaaactga tgggaattca tttgaaaact atacaacaaa aattatgaaa
      241 gcagctaaaa aaagagaaca tgtaccacta gataatttcc agcaacctgc taaggatgtt
      301 gttgatgcag gctctgattt atcagaaaag ctcaaactga agagagccaa atcggctgaa
      361 tcatctaagc gaacgagaga tcgacaaaag gcttatattg aacaaatcga attattgatg
      421 caacaacaaa agaaacaaat tgaatcctta attgaagcac aaaatgaggt tagtgtcgat
      481 tctaaagcag acatcacaaa ctttggtaga ttttatcgag attggtctta taaattcgac
      541 aatctaattg cttcgttaca acgccaaatc tatgtaaata gcaatcctga tcacatttcc
      601 cctgttattc aaataatcct caaccacatt gacttgtcaa atcaacaact tgaaaaaatt
      661 gaacttttga aagtccaaac tattgaacaa gagaagacta ttacatatca actgaatacg
      721 ttgaaagatg aaatatcagg tttatttgca ggtagcaaat ttgtcgatag aggtgatcat
      781 gaggctatgt cgaatttcaa aaataatatg tttgaacaaa ttggtagatt atcagctatg
      841 gcaatatact taactcaggc tgatacttta aggacaataa cttataagaa gctgcaaacc
      901 gttctcacgt taacacaaat tggcatcgct tttataacag ttcataaaca tgtcaagcga
      961 ctacacactt ggacaaattt gtgggaaagt aaaccaaatg gtccaaatgt gtga
//
LOCUS       XM_071832518             348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842370), mRNA.
ACCESSION   XM_071832518
VERSION     XM_071832518.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..348
                     /gene="LOC139842370"
                     /note="uncharacterized LOC139842370; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842370"
     CDS             1..348
                     /gene="LOC139842370"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688619.1"
                     /db_xref="GeneID:139842370"
                     /translation="MTDEHNVLYNTIVDAVYKDNGGLFFVYGYGGTGKMFVWKTLAAA
                     IRSRGDIVINVALSGIAALLLTGGRTTHSRFAIPINVLEDSFCSIKKNSDLAALLNKA
                     KLIIWDEALEAFD"
     misc_feature    1..>345
                     /gene="LOC139842370"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(88..108,322..324)
                     /gene="LOC139842370"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgactgacg aacataatgt tctgtacaat acaatcgttg atgcggtata taaagacaat
       61 ggtggattat tcttcgttta tggatatggt ggtactggaa aaatgtttgt ttggaaaaca
      121 cttgccgctg ctattcgttc tcgtggagac attgttataa atgtcgcctt aagtggaatt
      181 gcagcattac ttctcactgg cggtagaaca acacattcaa ggtttgctat tcctatcaat
      241 gttttagaag attctttctg ctcaataaag aaaaatagtg acttagcagc tttgttgaac
      301 aaagcaaagt taattatatg ggatgaagca ctcgaggcat ttgactaa
//
LOCUS       XM_071832519            1092 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842371), mRNA.
ACCESSION   XM_071832519
VERSION     XM_071832519.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1092
                     /gene="LOC139842371"
                     /note="uncharacterized LOC139842371; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842371"
     CDS             1..1092
                     /gene="LOC139842371"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688620.1"
                     /db_xref="GeneID:139842371"
                     /translation="MKLNSLYDQIRDEKIFGYLRGETSPNASEIDKVIVAKIPDKDDD
                     PELYSLVSDFTMHGPCGEKHKECPCMRRGTCSKGFPKDFTDESHFDGDGFPIYRRRND
                     GNFIMKKGEKLDNSKGPNRISAHFQANNNANASCEAAWRLFNYEIVFRSPAVYRLSFH
                     LPNQQPIVYDGDDSMERVINKPSIGASQFIEWMNSIEKISKQDNTHMLNFLAIMFGIN
                     HQESGPRGKESCYAMGLLNDDKEYIASIKEVHQCSTGNAYRSLFVSLITTDSITFPDR
                     VWKETCDLLSDDLTRPERLKFNDPETFKRVLQNLALSRIEKDLNSAVYSLRNIPYMPF
                     PNLEFIQSSLNTLIQDEISYDIENLKEEH"
ORIGIN      
        1 atgaagctta atagtttgta tgaccaaatc agggatgaaa aaatatttgg atatctaaga
       61 ggagagactt caccaaatgc ttccgaaatt gacaaagtca ttgtagctaa aattcccgat
      121 aaagatgacg atccagaatt gtattcttta gtttcagatt ttacgatgca tggtccatgt
      181 ggcgaaaagc ataaagaatg tccatgcatg cgtcgaggta catgttctaa aggatttcca
      241 aaggacttta cagatgaaag tcactttgac ggcgatggat tcccaattta caggcgccgt
      301 aatgatggta attttatcat gaaaaaagga gaaaagctag acaacagcaa aggtccaaat
      361 cgtatatctg ctcattttca ggctaataat aatgcaaatg cctcttgtga agcagcatgg
      421 cgtcttttca actacgaaat tgttttcaga tcacctgcag tttacagact atcctttcat
      481 ctaccaaatc agcaaccaat tgtatatgat ggtgatgata gtatggaacg tgtaatcaac
      541 aaaccttcca tcggtgcttc acaattcatt gagtggatga attcaatcga gaaaatctcg
      601 aagcaagaca atacacatat gttgaatttc ctcgctatta tgtttggaat caatcaccaa
      661 gaaagtggac caagaggcaa ggaatcctgc tatgcaatgg ggctattgaa tgacgataaa
      721 gaatacattg cttcaataaa agaggtacac caatgctcta cagggaacgc ctataggtct
      781 ctttttgttt ctttaattac aactgacagt ataactttcc cagaccgtgt ttggaaagag
      841 acctgtgatt tattgtctga cgatcttacc agaccagaac gtctaaagtt taatgatcca
      901 gaaactttca aaagagtact gcaaaacctt gcactatcaa gaattgaaaa agacctcaac
      961 agtgcagttt atagtttgcg taacataccg tatatgcctt ttcctaatct cgaattcatt
     1021 caatcatcac tcaacacgct tattcaagat gagatttcat acgacataga aaatctaaaa
     1081 gaagagcact ag
//
LOCUS       XM_071832520             954 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842372), mRNA.
ACCESSION   XM_071832520
VERSION     XM_071832520.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..954
                     /gene="LOC139842372"
                     /note="uncharacterized LOC139842372; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842372"
     CDS             1..954
                     /gene="LOC139842372"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688621.1"
                     /db_xref="GeneID:139842372"
                     /translation="MGEQTSYDCLNCKCVFHLYGPEYLRKPTAQDVQRLTTKHAQIHG
                     FPGMLGSIDCMHWAWRNCPARWKGHYTRGDHGYPSIMLEAVASYDGWFWHAFFGTAES
                     NNDINVLDQSDLFNDLLAGEAPPCTYTVNGCTFTKGYYLTDGIYPEWSTLIKSFRNSI
                     DPKQKNFKRYQESARKDIERAFGILQGRWQIDQRPALPYYIRKIRRILLACVILYNMI
                     TEDNGRSFCGLEENYRPVRRTRGSFQERVDAHMRVDAKIRDVGIHRLLRDMLVEHIHN
                     LSPNYRIRHDPTRNPNNQDDVGPSHIPDDEDEEDQEDDDEE"
     misc_feature    64..669
                     /gene="LOC139842372"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgggtgaac aaacctcata tgattgttta aactgcaaat gtgttttcca cttgtacgga
       61 cccgaatatt tgagaaaacc aactgcacaa gatgtgcaac gtttgaccac taaacatgct
      121 caaatacatg gttttccggg gatgttagga agtattgatt gtatgcattg ggcatggaga
      181 aattgtccgg cacgttggaa gggccattat acacgaggtg accatggtta cccgtcaatt
      241 atgcttgaag cggtagcgtc gtacgatgga tggttttggc acgctttttt tggaactgct
      301 gaatcaaaca atgatatcaa tgtacttgat caatccgatt tgtttaacga cttattagcc
      361 ggtgaagcac caccatgtac gtatacggtt aacgggtgta cgtttactaa gggttattat
      421 ttgacggatg gaatttaccc ggaatggtct acattaatta aatcgttcag aaattcgata
      481 gacccgaaac aaaaaaattt caaaaggtat caagaatcgg caagaaaaga tattgaacga
      541 gcatttggaa tactacaagg ccgatggcaa attgatcaac gtccggcact accgtattat
      601 atccgcaaaa ttagaagaat tttattagct tgtgtgatat tatataatat gataaccgag
      661 gacaacggcc gttccttttg tggactcgag gaaaattatc gtccggttcg acgaacacgg
      721 ggatcattcc aagaaagggt tgatgcgcat atgcgagtgg acgcgaaaat aagagatgtg
      781 ggcattcatc gactactacg agatatgctt gtagaacaca tacataatct ttcacctaat
      841 tatcgaatac gacatgatcc gacaagaaat ccaaacaatc aagatgatgt cggaccttca
      901 cacattcccg atgacgagga tgaagaagat caagaagacg acgatgaaga atag
//
LOCUS       XM_071832521            1362 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein-tyrosine-phosphatase
            MKP1-like (LOC139842374), mRNA.
ACCESSION   XM_071832521
VERSION     XM_071832521.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1362
                     /gene="LOC139842374"
                     /note="protein-tyrosine-phosphatase MKP1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139842374"
     CDS             1..1362
                     /gene="LOC139842374"
                     /codon_start=1
                     /product="protein-tyrosine-phosphatase MKP1-like"
                     /protein_id="XP_071688622.1"
                     /db_xref="GeneID:139842374"
                     /translation="MLGEKDDNFNSPPPPPPLLPAAVDEGTRKTSCHSVSWAGSSPVI
                     SKHKSTKSRACLPPLSISRPKAKEWPMAGPDDLGIWPNIPTTPRAIPKPEFEFKKDKL
                     AHFDKECSRIIDHVFLGSDYVAKNLDVLRENGITHVLNCVGFVCPEYFKKDLEYKTLW
                     LQDTPSEDITSILYDVFDYFEDVREQKGRIFVHCCKGVSRSTSLVIAYLMWVQRFSFE
                     EALQQVKTARGVTDPNMGFACQLLNCQKRVHNAPMSPKSAIRMFRIAPHSSYDPLHLV
                     PKLLTQPNLKALDSRGAFIVHVPDNIYVWIGKNCLLLMFESAILAASQVIRYEKAIGP
                     VLRVMEGEEPVEFWWAVFSEKENEMEVSLGEKRVVDYDLDFEIFEKAVDGGVVPPLTM
                     VNSNYEMCLPVRQSGWERLRWKITNGGMKELIDYKESHDDNFECQLSESSSFVVKRLK
                     KVH"
     misc_feature    325..729
                     /gene="LOC139842374"
                     /note="dual-specificity phosphatase domain; Region: DSP;
                     cd14498"
                     /db_xref="CDD:350348"
     misc_feature    <862..1050
                     /gene="LOC139842374"
                     /note="Gelsolin homology domain; Region: GEL; smart00262"
                     /db_xref="CDD:214590"
ORIGIN      
        1 atgttagggg aaaaagatga taattttaat agcccaccac caccaccacc attgctgcct
       61 gctgctgtcg atgaaggtac tcggaaaacg tcctgccact cagtttcttg ggctggtagt
      121 tcacctgtga tttcaaagca taaaagcaca aaatcaagag catgtttacc tcccctttcg
      181 atttcaagac cgaaagcaaa ggagtggccg atggcgggtc ccgacgatct cgggatttgg
      241 ccgaacattc ccaccactcc tcgtgctatc cctaaacctg aatttgaatt caaaaaagac
      301 aaacttgcac attttgacaa agaatgttct agaattatag atcatgtttt cctaggaagc
      361 gattacgttg ctaaaaacct tgatgttctt cgtgaaaatg gcatcacaca tgttttaaat
      421 tgtgtcggtt ttgtgtgtcc cgagtatttc aagaaagatc ttgaatataa aaccctctgg
      481 cttcaagaca ccccttctga agacataaca agtatcttat acgatgtttt tgattacttt
      541 gaggatgtac gagagcaaaa aggtcgaatc tttgttcatt gttgtaaagg ggtatcaagg
      601 tctacatctt tagttatcgc ttacttaatg tgggtccaac ggtttagctt cgaagaagca
      661 cttcaacaag tgaaaacagc aagaggggta actgacccaa atatgggttt tgcttgtcaa
      721 ctattgaatt gccaaaaacg ggtccataat gcacccatga gcccaaagtc tgctataaga
      781 atgtttagaa tcgccccaca ttcttcatat gacccacttc atctcgtgcc taaattatta
      841 acccaaccca atttaaaagc cctcgattca cgtggagcgt ttattgttca cgtgcctgat
      901 aatatttatg tgtggattgg aaagaattgt cttttgttaa tgttcgagag tgcaatttta
      961 gcagcgtcac aggttattag atatgaaaag gcaattgggc cggttttgag agttatggaa
     1021 ggggaagaac cggttgagtt ttggtgggca gtttttagtg aaaaagaaaa tgagatggaa
     1081 gttagtttag gggaaaaaag agtcgttgat tacgatttag actttgagat ttttgagaaa
     1141 gcggttgatg gtggtgttgt gcctccttta acaatggtga acagtaatta tgagatgtgt
     1201 ttgcctgtaa gacaaagtgg gtgggaaaga ttaagatgga agatcactaa tggtggcatg
     1261 aaagaattga ttgattataa agaaagtcat gatgataatt ttgagtgtca attatctgaa
     1321 tcttcatctt ttgttgttaa aagattgaag aaagttcatt aa
//
LOCUS       XM_071832522            3723 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative multidrug
            resistance protein (LOC139842376), mRNA.
ACCESSION   XM_071832522
VERSION     XM_071832522.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3723
                     /gene="LOC139842376"
                     /note="putative multidrug resistance protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139842376"
     CDS             1..3723
                     /gene="LOC139842376"
                     /codon_start=1
                     /product="putative multidrug resistance protein"
                     /protein_id="XP_071688623.1"
                     /db_xref="GeneID:139842376"
                     /translation="MAKKGGMFHFADGVDKLLMLFGTIGCIGDGLMSPLTMIILSGII
                     NDYGGGDPSFSYHVVNKYAFRLLVLAVGVGSAAFLEGICWTRTAERQTSRLRMEYLKS
                     VLRQEVGFFDTQVGSSTNFEVITAISCDAQSIQEVMADKIPNCLAHLSGLVFSVVVAF
                     ILSWRLALASLPFAFMFVVPVLGIGSLLKGLAMEQKDAYDKGGGVADQAISSIRTVYS
                     YVGEQQMIDKFSIALEASLKLGIKQGFTKGLMIGSMGMIFVAWAFVAWVGSYLITEKG
                     ESGGKVFVAAICVIMSGLSAMSALPNVPFISDAIAATSRMFEMISRIPLIDSEKVKGK
                     TIPSVRGDIEFRRVEFSYPSRPDTLILQGLNLRVKAGQTVGLVGGSGSGKSTIISLLE
                     RFYDPNRGDIFLDGHRIKSLQLKWLRSQMGLVNQEPVLFATSIKENILFGKEGVSTEL
                     VELAAKKANAHDFIIKLPDAYDTQVGQFGIQLSGGQKQRIAIARALLKEPKILLLDEA
                     TSALDSESERVVQDALDQASVGSTTIIVAHRLTTIRKADKIVVLQAGKVIESGSHDEL
                     MRENGAYYQMVQLQQSTTSNETPNSPQTPVSRRFYNAQTPITPRTPISTRSSYQNSPI
                     SPFSPAVSFSMAHSVQMYSYEDSDDETFDVILDPKPSQWRLLQMNASEWKRAVLGCLG
                     AGGFGAISPIHSYCLGSVVAVYFLPEKSKVKSETAFYCFVFVTLGVVCFITSLLQHHN
                     FAVMGERLTKRVREKMLENVLTFEIGWFDCDKNTSASVCSRLATEASLIKSLVGDRIS
                     LLLQVFISAFLAFLLSLIISWRVALVMMSVQPLLIASFFSKSVLMKNLSSKAKKAQNE
                     GTQLASEAVVNHRTITAFASVERIMRLYAQTLKGPRKQCVKQSWFSGMGLFISQFVTT
                     AAIALAFWYGGREMNNGKVTSKEMFQVFFILMTTGKNIADAGSMSSDLSKGGGAVRSA
                     LAVLDRKTEIDPNDQEGLIVTNIKGDIELKKVYFSYPARPDQMIFQGLSLKIEAGKTI
                     ALVGQSGSGKSTVIALIERFYNTMTGCVLIDGRDLKNYNLRNLRSRIALVSQEPTLFG
                     GSIRHNIVYGKDEVSEAEIKKAAKLSNAHEFISSMKDGYETYCGERGVQLSGGQKQRI
                     ALARAILKNPAILLLDEATSALDSVSENLVQEALEKMMVGRTCVVVAHRLSTIQNADS
                     ISVIKNGKVVEQGSHTELLSMGSNGAYHSLIKLQHL"
     misc_feature    175..3711
                     /gene="LOC139842376"
                     /note="multidrug resistance protein (mdr1); Provisional;
                     Region: PTZ00265"
                     /db_xref="CDD:240339"
ORIGIN      
        1 atggcaaaaa aaggtgggat gtttcatttt gcagatggcg tagataaact tcttatgtta
       61 tttggtacaa taggttgcat tggagacggg ttaatgtctc ctttgacaat gattatcctt
      121 agtggaatta ttaatgatta tggaggcggt gatccttctt tttcatatca cgtggtgaat
      181 aagtatgcat tcaggctgct cgtccttgca gttggtgttg gatcagcagc tttccttgaa
      241 ggaatttgct ggaccagaac agccgaaaga caaacatcgc gtctcaggat ggaatacttg
      301 aaatcggtac ttaggcaaga agttggtttc ttcgacacac aagttggttc ttccaccaac
      361 tttgaagtta ttacagcaat ttcatgtgat gctcaatcga ttcaagaagt catggctgat
      421 aagattccga actgtctggc ccacctatcg ggacttgtat tcagtgtagt agtcgccttc
      481 atactttcat ggcgactggc tctggcttcg cttcctttcg cctttatgtt cgtcgttccc
      541 gttttaggaa tcgggtcgtt actaaaaggt ctagcaatgg agcaaaaaga tgcctatgat
      601 aaaggtggtg gggttgcaga tcaggcgatc tcgtcaatac gtactgttta ttcgtatgtt
      661 ggtgaacaac aaatgattga taaattcagc attgcccttg aagcgagctt gaaactcggg
      721 attaaacaag ggtttacaaa gggtttgatg ataggaagca tgggtatgat ttttgtggct
      781 tgggcttttg ttgcttgggt cggaagttat cttattactg aaaaaggaga aagcggtgga
      841 aaagttttcg ttgcagcaat ctgtgtcatc atgtcaggcc tgtcagctat gagtgcactg
      901 cctaatgtac cgttcatttc agacgcaata gccgctacat caagaatgtt cgaaatgatt
      961 tcccgaattc ctctcataga ttctgaaaaa gtcaaaggta aaacaatacc atccgtaaga
     1021 ggtgatattg aatttagacg cgttgaattc tcatacccat caagacccga caccctgatt
     1081 cttcaaggac tcaacctacg agtcaaagcc ggtcaaacag ttggtcttgt gggtggcagc
     1141 gggtcaggaa agtcaacaat catctcttta cttgaaagat tttacgaccc gaatcgtgga
     1201 gacatatttc ttgatggaca cagaataaaa agtcttcaac ttaaatggtt aagatctcaa
     1261 atgggcttag ttaaccagga gcccgtacta ttcgcaacat cgataaaaga aaacatactt
     1321 ttcggtaaag aaggtgtttc aaccgaactc gttgagctcg cagctaaaaa agcaaacgca
     1381 cacgatttta ttattaaatt acccgatgct tacgatactc aagtgggtca attcgggatt
     1441 caattatcgg gaggacaaaa gcaacgaatc gctatagcac gtgcgttact taaagaaccg
     1501 aaaattcttt tacttgatga agcaacaagc gcgttggatt cagaatccga acgagttgtt
     1561 caagacgcgt tagatcaagc gtcagtagga agtacaacga tcatcgtagc acatcgtctt
     1621 acaacaatac gcaaagccga taagattgta gttctacaag caggtaaagt aatcgaatcg
     1681 ggttcacacg acgaattaat gcgcgaaaac ggggcttact accaaatggt gcagttgcaa
     1741 caatcaacaa cttcgaacga aacaccaaat agtccgcaaa caccggtttc tagaagattc
     1801 tataacgccc aaacaccgat aacaccaaga acgcctatca gtacgagatc gagctatcaa
     1861 aatagcccga tatccccttt tagcccggcg gtttcgttta gtatggccca ttcggtacaa
     1921 atgtattcgt atgaagatag tgacgatgaa acattcgatg ttattctaga tccgaaaccg
     1981 tcacaatggc gtttgctgca aatgaacgcg tccgaatgga aacgggccgt tctcgggtgc
     2041 ctaggtgcgg gtggtttcgg tgctatatca ccgatacatt cttattgttt aggatcggtg
     2101 gtcgcggttt acttcttacc agaaaagtca aaggtcaaat cggaaacggc gttttactgt
     2161 ttcgtgtttg taaccctagg agttgtttgt ttcattacaa gcttgcttca gcatcataac
     2221 tttgcggtta tgggcgagag gttaacgaag agagtacgag agaaaatgct cgaaaacgtg
     2281 ctcacttttg aaatcggatg gttcgattgc gacaagaaca cgagcgcatc cgtatgttct
     2341 cgtctcgcaa ccgaagccag tctgattaaa tcgctcgttg gtgatcgaat atctttactt
     2401 cttcaagttt tcatcagcgc gtttcttgca tttctgttat cgttgataat tagttggaga
     2461 gttgctcttg tgatgatgtc ggtacaaccg ttactcattg ctagtttctt ctcgaaatct
     2521 gttttaatga aaaacttgtc gtctaaagcg aaaaaggcgc aaaacgaagg aactcaatta
     2581 gcaagtgaag cagtcgtgaa tcatagaaca atcaccgcgt ttgcttctgt agaacggatc
     2641 atgagattat acgcgcaaac gttaaaagga ccgagaaaac aatgcgttaa acaatcgtgg
     2701 ttttcaggta tgggtttgtt catttcacaa tttgtgacaa ccgcagcgat agcgttagcg
     2761 ttttggtacg gtggacgaga aatgaacaac ggaaaagtta cctcaaaaga aatgtttcaa
     2821 gttttcttca ttttgatgac aaccggaaag aatatcgcag atgccggtag tatgagttca
     2881 gatttgtcaa aaggtggtgg tgcagttaga tcagcgttag cagtactcga tagaaaaacc
     2941 gagatcgacc caaatgatca agaaggttta atagttacga atattaaagg cgatattgag
     3001 cttaaaaagg tgtacttttc gtaccctgca aggcccgatc agatgatctt tcaaggtttg
     3061 tctttgaaaa ttgaagctgg gaaaacaata gcacttgtgg gtcaaagtgg gtcgggtaag
     3121 tccactgtta tcgcgttgat cgaaagattt tacaacacga tgacgggatg tgtacttata
     3181 gacgggcgag atttgaaaaa ctacaatttg agaaacttga gatcgcgtat cgcattggtg
     3241 agccaagaac cgactctttt tgggggaagt atacgacata acattgttta tggtaaagat
     3301 gaagttagtg aggctgaaat aaagaaagca gcaaagcttt ccaatgccca tgagtttata
     3361 agttcaatga aagacggata tgaaacttac tgtggagaaa gaggagttca gttatcggga
     3421 ggccaaaaac aaagaatcgc gcttgcacga gcaatactta aaaatcctgc aattcttctt
     3481 ttagatgagg caactagtgc actagacagt gtatctgaaa atttagtgca agaagcatta
     3541 gaaaaaatga tggttggcag gacatgtgtg gtagtggctc atcgtttatc aacgatacaa
     3601 aatgctgatt cgatatctgt gattaaaaat gggaaagtag tagaacaagg atctcacact
     3661 gaactgcttt caatggggag taatggtgca tatcactctc ttataaagtt gcaacatttg
     3721 taa
//
LOCUS       XM_071832524            1681 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides D-cysteine desulfhydrase 2,
            mitochondrial (LOC139842377), mRNA.
ACCESSION   XM_071832524
VERSION     XM_071832524.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1681
                     /gene="LOC139842377"
                     /note="D-cysteine desulfhydrase 2, mitochondrial; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139842377"
     CDS             1..1440
                     /gene="LOC139842377"
                     /codon_start=1
                     /product="D-cysteine desulfhydrase 2, mitochondrial"
                     /protein_id="XP_071688625.1"
                     /db_xref="GeneID:139842377"
                     /translation="MLAVDIKGSNDHYAKPRGYLPTYTKTPNLCKLSLHMQGANTVYS
                     NLQASVMKFTYQRNLSISSLKYDFHSQCTSINHQVICNSNSSVEEFSSKVLNRRWTLL
                     NPDTKVHQINVSRVQTQHQCESIGNFRFSNNSRPSLGENLKEWRDDQSSFYIVRDDLL
                     HPLVNGNKARKLDALFPLVEDHLGTHVVTCGGCQSAHAAAVAVSCAERGLKVDLLLRG
                     EQPQVLTGYNLISMLYGNVTYVPRSLYAKRKEMLLSHADSLGGTIVCLDDLLEASFTN
                     HNSMKSNFPNIEDRQASNLKKIVIINEGAGDAVALPGLVRLIQYLSQDHILGKDQPLK
                     IVVDAGTGTTAVGLEIGALCLGLPWEVTAVMLADTIEGYRKQEESLISELCRCFDLRI
                     KHTGIVNWVERRHPRKFGNVLKGEIEVCQRIAQETGVLVDPIYTLAAWELATQLSQEE
                     RKGGAKVVMLHTGGTLGMFGLAQRYKSYF"
     misc_feature    457..1419
                     /gene="LOC139842377"
                     /note="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase, PLP-dependent ACC
                     family [Amino acid transport and metabolism]; Region: Acd;
                     COG2515"
                     /db_xref="CDD:442005"
ORIGIN      
        1 atgctcgctg tggacataaa gggctcgaat gatcattatg caaaaccacg aggttatttg
       61 ccaacttaca ccaagactcc caatctctgc aaattatcgt tacatatgca gggggcaaat
      121 acagtttaca gtaatcttca agcaagtgta atgaagttta cctatcaaag aaacctttca
      181 atttcatctc taaaatacga ctttcattca caatgcactt caattaatca tcaggtcatt
      241 tgtaactcca attcaagtgt agaggagttt agttcaaaag ttttgaatag gagatggaca
      301 ttattgaatc cagatactaa agttcaccaa ataaatgttt caagagtaca aacacaacat
      361 cagtgcgaat caattggaaa ttttaggttt tcgaacaatt cacgtccttc gttgggtgag
      421 aatttgaagg aatggcgtga tgatcagtcg tcattttata tcgttcgtga tgatttgttg
      481 catccgcttg tgaatggtaa taaggcgagg aaacttgatg cattgtttcc acttgttgaa
      541 gatcatctag gaacccatgt ggtcacgtgt ggaggttgcc aaagtgcaca tgctgcagct
      601 gttgctgttt cttgcgctga gaggggacta aaggtagatt tacttttacg cggcgaacaa
      661 cctcaagttc taactggtta caatttgatc tccatgttat atggaaatgt cacttatgtt
      721 ccaaggtctc tatatgccaa aaggaaagaa atgctactgt cacatgctga ctcattaggc
      781 gggaccattg tatgccttga tgacttactc gaagcttcct tcacaaatca caactctatg
      841 aagtcaaact tcccaaatat agaagacagg caggcttcaa atttgaaaaa gatagtaatt
      901 atcaatgaag gtgcaggaga tgcagttgca ttgcctggtc tggttcgcct aatacaatac
      961 ttgtcgcaag atcacatact tggaaaagat caacccctga aaattgttgt agatgctggt
     1021 accggaacaa cggccgttgg tctagaaatt ggagcgttat gtttagggct cccatgggaa
     1081 gtaactgcag tgatgctggc ggacaccatt gaagggtata gaaaacagga ggaaagttta
     1141 atatctgaat tatgtcgatg ttttgatttg cgtattaagc atactggaat tgttaattgg
     1201 gtagaacgtc ggcatccaag aaaattcggg aatgttttga aaggggaaat agaagtatgc
     1261 caacgaattg ctcaagaaac tggtgtttta gtggacccca tatatacttt ggctgcatgg
     1321 gagctagcaa ctcaacttag tcaagaggag agaaaagggg gagccaaagt ggtgatgctt
     1381 cacactggtg gtacacttgg catgtttggg ttagcacaac gatacaagtc ttacttctaa
     1441 atctctattg aggcaggtat gtcatgtgaa caacaattct tatttgagaa aaaaaaaaga
     1501 cttggtggac gttgatacta tacatcaagt ggtggcaaaa ggggtggctt gggttaacta
     1561 tttaagacgg ttagacaggt gatttattaa tatgagttca gatgccttca acactttttt
     1621 gttactattt ttagacgttt ctgctccgtt ggtccctgtt ttatacccca ctttgctaac
     1681 a
//
LOCUS       XM_071832525             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842378), mRNA.
ACCESSION   XM_071832525
VERSION     XM_071832525.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139842378"
                     /note="uncharacterized LOC139842378; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842378"
     CDS             1..591
                     /gene="LOC139842378"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688626.1"
                     /db_xref="GeneID:139842378"
                     /translation="MRLIAARLRKINKPFVKSIKSPDGDIIDCVPLNLQHAFDLPELE
                     GTMPLGPRPPELPVRVLVLLARPDCIVGSVYHCLSLPNGNDNAGMESEIKQIWSSKGE
                     SCPNGTIPIRRTTASDILRSISISKSGRIFSTSKDVTTSGHEHATGKRSKQLQLSVMV
                     VVVLVVPAGALMVFEGGRWNSGDRVFVEVRGGVVVL"
     misc_feature    52..444
                     /gene="LOC139842378"
                     /note="Neprosin activation peptide; Region: Neprosin_AP;
                     pfam14365"
                     /db_xref="CDD:464153"
ORIGIN      
        1 atgaggttga ttgctgctcg tcttagaaag ataaacaaac cttttgttaa atcgattaag
       61 agccctgatg gtgatataat agactgtgtt cctcttaatc ttcaacatgc ttttgatctt
      121 cccgaattag aaggaacaat gccattgggt ccacgtccac cagagttacc tgttagagta
      181 ttagtattat tggcccgacc cgattgcatt gtgggctcgg tttatcattg tctatcatta
      241 ccaaatggaa atgataatgc aggaatggaa tcagaaatca aacagatatg gagttcaaag
      301 ggtgaatcat gcccaaatgg tacaattcca attagaagaa caactgcaag tgacattttg
      361 agatctattt caatatctaa atctggaagg atattcagta ccagtaaaga tgtcacaacc
      421 agcggccatg agcatgcaac aggaaaaaga agtaagcagc tgcagttatc agtcatggtg
      481 gttgtggttc tcgttgtgcc tgcaggtgct ttaatggtgt ttgaaggtgg aagatggaac
      541 tctggtgatc gtgtttttgt ggaggttcgt ggtggagtgg tggttctttg a
//
LOCUS       XM_071832526            2088 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842379), mRNA.
ACCESSION   XM_071832526
VERSION     XM_071832526.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2088
                     /gene="LOC139842379"
                     /note="uncharacterized LOC139842379; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842379"
     CDS             1..2088
                     /gene="LOC139842379"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688627.1"
                     /db_xref="GeneID:139842379"
                     /translation="MNTLKQGSMNVVDYIREFEQLKIRTNVKEAEEHTIARFVGGLNA
                     FIADQRALTLKEIEDLEGVFETEPAYDESDSEEFVTADIGEFLVVRRVMHSAKTIEDK
                     SQRENIFHSRCTVKGKVCSLIVDGGSCTNAASAHMITLTSLKPSEIPRADPTAKNDKT
                     LFMTQAEVDTKLKGGTGAYLLLMVESDELNQHDEVPAQVKPLLSEFADVFPTGLPPIR
                     EEHLDHLRKVFELLRQYQLYEKREKCDFFVSKVVFLGYAVSEEGISMDPSKVEAIRSW
                     PSPFSITEVRSFHGLASFYRRFIKDLSTIIAPITDCMKKGVFEWSSYAQSAFESLKEK
                     PSSAPILALPNFDMLRYSLLSILEAIVLGFSFIKELYEADPDFAPILNYSPAESKRDY
                     VEQDGFLFKGSRLCFPKDSIRELLIREAHGGGLAGHFGINNTLDILSEHLYWPCMDKD
                     VKAVINRCATCFQAKSAFHKGLYIPLPVPNQPWEDLSMDFIVALPRTQRGKSPFEICY
                     GANPLTPIDLIPFTIEPKASVEAVAKVKKMKKLYEQVRAKIEKTNQQYKAKANQHRKQ
                     PTFIPGDLDKRKAKKDKGSFILRDEVEVDYSDDSQEGFEKGLADDAPGTTGFRLHGAG
                     SSTRVDVGGEAIRNVSFFEELEKEGPLPPRVPGVRIDCSSTKIKNYWGSYWHIVMVLD
                     FLIVPGLVAIRFA"
     misc_feature    <655..774
                     /gene="LOC139842379"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    958..>1041
                     /gene="LOC139842379"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    1222..1398
                     /gene="LOC139842379"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgaatacac taaaacaagg cagcatgaat gttgttgatt acatcagaga gtttgagcag
       61 ctcaaaattc gtaccaatgt caaagaagct gaagaacaca ctatagcaag attcgttgga
      121 ggtttaaatg cttttattgc tgatcaacgt gcccttacac taaaggagat tgaagatttg
      181 gaaggggttt ttgaaactga accagcatat gatgagtctg atagtgaaga gtttgttact
      241 gctgatattg gagaattttt agtggttcga agagtaatgc actcggctaa gactattgaa
      301 gataagagcc agcgtgaaaa catctttcat tcaaggtgca cagtcaaggg caaagtgtgc
      361 agcctgattg ttgatggagg cagctgtaca aatgcagcat ctgctcacat gatcaccctc
      421 acttctttaa agcctagtga aatacctaga gccgatccta ctgctaagaa tgataaaact
      481 ttgtttatga ctcaagctga agttgatact aagttaaagg gtggtactgg tgcttactta
      541 ttgctgatgg ttgaaagcga cgagttgaac cagcatgatg aagtaccagc tcaggtaaaa
      601 ccattgttat ccgaatttgc tgatgtgttt cctactggtt taccaccaat cagggaagaa
      661 cacttggatc atttgaggaa agtatttgag ctgttgaggc agtatcaatt atatgaaaag
      721 cgggagaagt gtgatttctt tgtcagtaaa gtagtgtttc ttgggtatgc ggtttctgaa
      781 gaaggcattt caatggatcc atctaaagtg gaagccatca gatcatggcc tagtcctttt
      841 tccatcactg aagttagaag ttttcatggt ttagcttcat tttatagaag atttatcaaa
      901 gacttatcca caattattgc tccaattacg gattgtatga agaaaggggt atttgaatgg
      961 tctagttatg cccaatcagc atttgaatca ttgaaagaaa agccaagttc agcacctata
     1021 cttgctttgc ctaattttga tatgctgaga tattctttgt tgtcaattct ggaagctata
     1081 gttcttggat tctcatttat taaggagtta tatgaagctg atccagactt tgctcccatt
     1141 ttgaactatt ctcctgctga gtccaaaaga gattatgttg agcaggatgg ttttctattc
     1201 aagggcagca ggttatgctt tccaaaagat tcgatcaggg aattactgat tagagaagca
     1261 catggaggtg gtttagctgg tcattttggg attaacaaca cattagatat cctaagtgaa
     1321 cacttatact ggccatgtat ggataaagat gtcaaagctg tgattaatcg ttgtgctaca
     1381 tgctttcaag ctaagtcagc atttcacaag ggtttgtata ttcctcttcc tgtccccaac
     1441 cagccatggg aagatttgag catggatttc attgttgcat tgccaaggac tcagcgagga
     1501 aaatcaccat ttgaaatctg ctatggtgca aatccactca cacccattga tctgattcct
     1561 tttacaattg agcctaaggc aagtgttgag gcagtagcaa aggttaaaaa aatgaagaag
     1621 ctgtatgaac aagtgagggc caaaattgag aagaccaacc agcaatacaa ggctaaagct
     1681 aaccagcata gaaagcagcc cactttcatt cctggtgatc ttgataaacg caaggctaag
     1741 aaggataagg gttcgtttat acttcgggac gaagtggaag tggattattc ggatgactca
     1801 caagagggtt ttgagaaagg tttggcggac gatgcgccag gtacaactgg ttttagattg
     1861 catggtgcag gttcgtcgac ccgggttgat gttggtggtg aagcgattcg gaacgttagc
     1921 ttttttgagg agcttgagaa ggaaggcccg cttcctcccc gagtgccggg tgttaggatt
     1981 gattgttctt caacaaagat taaaaattat tggggtagtt attggcacat tgtgatggtt
     2041 cttgactttt tgatagtccc gggattggtt gcgatacggt ttgcttaa
//
LOCUS       XM_071832527            2571 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842381), mRNA.
ACCESSION   XM_071832527
VERSION     XM_071832527.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2571
                     /gene="LOC139842381"
                     /note="uncharacterized LOC139842381; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139842381"
     CDS             1..2571
                     /gene="LOC139842381"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688628.1"
                     /db_xref="GeneID:139842381"
                     /translation="MIKRWLIFVSREARVSAKREVKEMRECVLGPVPDQHQHAADAPV
                     PAQSSDVNGCFRISATEASDLEAVFSVDEIWNALNECACNKAPGPDDFNIRFFKKFWA
                     IIRDDLVEVVNNFWSTGEFSKGCSSSFITLIPKKTDPVSLNEYRPISLIGSFYKIIAK
                     LLSIRIRKVIPDLVGFEQSAFILDGALIANESYEFLKNNRVKSIIFKVDFEKAFDSLK
                     WGFLDDMMNFMGFGSKWRGWIKSCLKTASISVLVNGSPTKEFNLERGVRQGDPRSPFL
                     FIIAAEGLYWLTKSAVSNNLFWGVEIGKDKNPLSHLQYADDTIFFVKWSLDNTVNHMK
                     LLKCFELCSGLKANYNKSNLFGIGVDKKDIENMANIISCKVGSFPFIYLGLPIGARMN
                     RLESWKPVIDKFEKRLADWKARSMSFGCRLTLVKSVLNSLPLYYFSLFRAPPYVLKKL
                     ECVRRKFFWGGSGDVSKVSWVKWDDVIRPWADGRLNIGSLDCKNLALIGKWWWRFFTE
                     LTSLWASVIKSIYGASGSLSLGWADSSPYANSIWSKIVKAGCEIDGKGVEFTKSFAKS
                     IGNGTCTNFWDDIWIIDRPLKEMFKRLVRLDSNADALVADRVVWNGQNCVPRWNRRIT
                     GRTIGELAELESLISSTYMNPVKADQWVWRLCGSDRFSTHSLSNLLMSKCYPTNSSNI
                     VTQKNAFVPKKVGVFVWRARRERLPVLLELDKRGIDLHSILCPICGDIVESVENALFS
                     CKKAHEVWCKVLKWWGIDPVQHSRLSLDGLLDINLSFSDVGKKIWQATVWTSVYLIWK
                     NRNQKVFKNSCWSLPVALKDIQVLSYDWIAKRCKVKKFEWHDWLHNPIWSCNLFVYFV
                     "
     misc_feature    382..1161
                     /gene="LOC139842381"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(625..642,802..807,940..942,946..951,1147..1152)
                     /gene="LOC139842381"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(625..642,802..804,946..948)
                     /gene="LOC139842381"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    805..807
                     /gene="LOC139842381"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    1981..2241
                     /gene="LOC139842381"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgatcaaga ggtggctgat ttttgtgagt agggaggcta gggtttcagc caagagagaa
       61 gtgaaagaga tgagagaatg tgtgttaggg cctgttccag accagcacca gcatgctgct
      121 gatgctcctg ttccagccca gtcgtctgat gttaacggct gttttcgtat ttctgctact
      181 gaagcttctg atcttgaagc tgttttttcc gttgatgaaa tatggaacgc gttaaacgaa
      241 tgtgcttgca acaaagcacc gggtccagac gactttaata taagattttt caagaagttt
      301 tgggccatta ttcgagatga tttggtggag gttgtcaata acttttggtc aacgggagaa
      361 ttctcgaaag gttgtagctc atcttttatc actcttatcc ccaaaaagac cgacccagta
      421 agtttgaatg aataccgacc tattagttta ataggtagct tttacaaaat tattgcgaaa
      481 ttgttatcaa taagaatccg gaaagtaata cccgatcttg tgggatttga acaaagcgcg
      541 tttattttag atggggctct tatagcgaat gaatcttatg agtttttgaa aaataatcgg
      601 gtcaagagta ttatttttaa agttgatttt gagaaggcct ttgatagcct taagtggggt
      661 ttcttagatg atatgatgaa tttcatgggg ttcgggtcta aatggagggg atggatcaaa
      721 tcgtgtttga aaaccgcctc aatttcggtt cttgttaatg gttcccctac aaaagaattc
      781 aacctcgaga ggggagtaag gcaaggtgac ccccgttcac cttttctttt tatcattgcg
      841 gcggaaggtc tttattggct aactaaatcg gcggtttcga acaatctttt ttggggtgtt
      901 gaaattggaa aagataaaaa tccgttatct cacctacaat atgcggatga tacgatcttt
      961 ttcgtgaaat ggagtttgga caataccgtt aatcatatga aactcctaaa gtgttttgaa
     1021 ttgtgttcgg gattaaaggc gaactataat aaaagtaatc tttttggaat aggggtggac
     1081 aagaaagata ttgagaatat ggctaatatt attagttgca aagttggctc gtttccattt
     1141 atatatcttg gtttgccaat cggtgcgaga atgaataggt tggaaagttg gaaaccggtt
     1201 attgacaaat tcgagaaaag attggcggat tggaaagccc gttcgatgtc tttcggttgt
     1261 cgtttaacac ttgtaaagtc agtcctaaat agtttaccgt tgtattactt ttcgctcttc
     1321 cgtgccccgc cttacgtgct taaaaaatta gagtgtgtga gacgtaaatt cttttgggga
     1381 gggtcgggtg atgtgtcaaa agtttcgtgg gtaaaatggg atgatgttat ccgtccttgg
     1441 gcggatggca gactaaatat tggttcactt gattgcaaaa atttagcact aatcggcaag
     1501 tggtggtgga ggttttttac cgaactcacc tccttgtggg ctagtgttat taaaagcatt
     1561 tatggggctt cggggtcatt atctttgggt tgggctgatt cttctcctta tgccaactct
     1621 atatggagca aaattgtcaa agcaggttgc gagattgatg gcaaaggcgt ggagttcaca
     1681 aagtcttttg cgaagtcgat tggtaatggt acgtgtacaa atttttggga tgacatttgg
     1741 attatcgata gacctttgaa agagatgttt aaaagattgg tgcggcttga ttcaaacgcg
     1801 gatgctttgg ttgcggatcg ggtagtttgg aatggccaaa attgcgtccc aagatggaat
     1861 cgcagaatta caggaagaac tataggggaa cttgccgagt tggagagctt gatttcgtcg
     1921 acatatatga atcccgtgaa ggccgatcaa tgggtatggc gtctatgcgg gtccgatcgt
     1981 ttctctactc actcattatc gaatctcctc atgagtaaat gttatcctac aaactcatct
     2041 aatattgtta ctcaaaaaaa tgctttcgtt cctaaaaaag ttggtgtttt cgtgtggagg
     2101 gcgaggcggg aacgattacc cgtcttgttg gaacttgaca aacggggcat tgatcttcat
     2161 tccattcttt gcccgatatg cggtgacatt gtggaatcgg ttgagaacgc tttgttctct
     2221 tgtaagaagg cccatgaggt gtggtgtaaa gtccttaaat ggtggggaat tgacccggtc
     2281 caacatagtc gtcttagcct tgatggtctt cttgatatta acctttcttt ctcggacgtg
     2341 ggcaagaaga tttggcaagc tacagtatgg actagtgtgt atcttatatg gaaaaatagg
     2401 aaccaaaaag ttttcaagaa ttcgtgttgg tcccttccgg ttgccttaaa ggacatacaa
     2461 gtgttgagct acgattggat cgcgaagaga tgtaaagtta aaaagtttga gtggcacgat
     2521 tggttacata acccgatttg gtcttgtaat ttgtttgtat atttcgtgta a
//
LOCUS       XM_071832528            1724 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin-like-specific
            protease 1C (LOC139842383), mRNA.
ACCESSION   XM_071832528
VERSION     XM_071832528.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1724
                     /gene="LOC139842383"
                     /note="ubiquitin-like-specific protease 1C; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842383"
     CDS             1..1578
                     /gene="LOC139842383"
                     /codon_start=1
                     /product="ubiquitin-like-specific protease 1C"
                     /protein_id="XP_071688629.1"
                     /db_xref="GeneID:139842383"
                     /translation="MPLIIDWDLLMATEDSFSDDIPPEIVITPSNNQTTDDDDDVTDF
                     DFQNQTVDQLKSRISSFDKSISATAHKLSDNGEKLRAKRRRYAAELERRNCIRRNHKV
                     KGGGIKFEETMHLSDRSDEGASYRKEKRDQKSFASQRFSKLLDGNQKCSRTGNAFQEE
                     LFYFKPGQGRNMKPASQSLSRRWSSQQTSSKTKPFHWPNTPLFDTGKRRTSNDDEKLS
                     RSSTSCHQSVERKWDLFIQPSTYSLVDDDEPLLSETPFEKLSDCMKDVKVYYPSRDDQ
                     DSVEVNYSNMDSIASKAWLSSNIMNFYIRYLQQLTSSSENATCKYHFFNTYFYNKLKK
                     LNNSEEDSFLKLRKWWKHVNIFEKAYIFLPIHESGHWSLAIICIPAKSDDLGPVVLHL
                     DSLALHNSYSIFDNVRSFLKGEWMYLQNSEDPFELPIASEIWENLDCKIIDREIQVPR
                     QRNAYDCGLFVLFYMERFIKEAPERLKEQDLSMFTKQWFNPEEASSLRGKIKNILVKE
                     FKLAKQKETTSSPSPNR"
     misc_feature    880..1467
                     /gene="LOC139842383"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; pfam02902"
                     /db_xref="CDD:397169"
ORIGIN      
        1 atgcctctca taatcgactg ggatttgctg atggctaccg aggactcatt ttccgacgac
       61 attccaccgg agatcgtcat tacgccgtcg aataatcaaa caaccgacga cgatgacgac
      121 gtcacagact ttgattttca aaaccaaacc gtcgatcaac ttaaaagtag gatttcaagt
      181 ttcgataaaa gtatttcagc gacagctcat aagctatcgg ataatggcga aaaactcagg
      241 gctaaacgcc ggcgatacgc tgctgaactt gaacgtcgta actgtatccg tcgtaatcac
      301 aaggtcaagg gtggtggtat caagtttgaa gaaacgatgc atctttcgga tcgaagtgat
      361 gaaggtgctt cgtatcgaaa agagaaacgt gatcagaagt cttttgcttc acaaagattt
      421 tcgaaattgt tggatggaaa tcagaaatgt tcaaggactg gcaatgcatt tcaagaagaa
      481 ttgttttatt ttaaacccgg tcaaggaaga aatatgaagc cagccagtca aagtttgagt
      541 aggagatggt ctagtcagca gacatcgtcc aaaacaaaac cgtttcattg gccaaacact
      601 cctttgtttg ataccggaaa acggagaacc tcaaatgatg acgaaaaact cagtcgctct
      661 tctacttctt gtcaccagtc cgttgaacga aaatgggacc tctttattca gccatcaact
      721 tacagcctgg ttgatgacga cgaacctctg ctttcggaaa caccttttga aaaattaagc
      781 gactgcatga aagatgttaa agtctactac ccatcaaggg atgaccagga ttcagttgaa
      841 gttaattact ctaacatgga tagtattgct tctaaagcat ggctctcatc aaatattatg
      901 aacttttata tacgttatct tcagcagctg acatcttcat cagaaaatgc aacatgcaag
      961 tatcattttt ttaatacgta tttctacaac aagctcaaaa agctgaataa cagtgaagaa
     1021 gattcttttc tgaagctcag aaaatggtgg aaacatgtca acatatttga aaaagcttat
     1081 atatttctac cgattcatga aagcggtcat tggagcttgg ctattatatg tatacctgcc
     1141 aagagtgatg acttagggcc agttgttctt catcttgatt cactagcatt acataatagc
     1201 tactcgattt tcgacaacgt tagaagcttt ttaaaaggag agtggatgta cttacaaaat
     1261 tcagaagatc cttttgagct ccccatcgct agtgaaattt gggaaaatct tgattgtaaa
     1321 ataattgaca gagaaattca ggttccacga caaagaaatg cgtatgactg tggactattt
     1381 gttctatttt atatggagcg tttcattaaa gaggctcccg agagactaaa agaacaagat
     1441 ttatcaatgt ttactaaaca atggttcaat cccgaagaag cttctagttt aagagggaaa
     1501 ataaagaata tacttgtaaa agagttcaag cttgcaaaac agaaagaaac cacttcgtct
     1561 ccctctccca accgttagca acatttctct cacaacttga aattggtttt gatgttctca
     1621 tttgtacaga tattttcagc ttgaaaatat tgaattacaa aactagtgta gatggccacg
     1681 ggaacacgta aagattctca cttggttgac tttaggagac cgct
//
LOCUS       XM_071832529            2076 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139842384), mRNA.
ACCESSION   XM_071832529
VERSION     XM_071832529.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2076
                     /gene="LOC139842384"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842384"
     CDS             1..2076
                     /gene="LOC139842384"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071688630.1"
                     /db_xref="GeneID:139842384"
                     /translation="MEEEYEAMEPENEPIEVEYEISDEEIIDNATGIDTPIVRTTRKK
                     ETPGGSLYYAPIVDESLLPIVGKNYETLEECEKMYRLYAFHACFDIRKSTQKTTKSGL
                     VKQKYYLCNRGGVPMQVNFDTLQSSKKPIRKSNMECTGCRARVKFDWVYGTNTFILSD
                     FQEHHNHELLPQEYRHLSKTERQMKYAEQLFVYHSSVSNIGPTKAYEVYSNMKGSEKN
                     VHGTVTDFRNWRRDLNVFINASGSQMLVNKMEERKKYVPGFSFEYKLEKSQLHSIFWA
                     DEVAKCNYKEFSDIISFDATYRMNRYNMKFVPFTGIDNHHRCVTVAAGLIRDETAESY
                     TWLLTCFMKTFGKEPNMIVTDQDKSMAIAIKAVFKTAKHRLCMWHIMRKVPSKIQEAI
                     PTIEDELEKDFKNRLNKLVWNISTWIPAYFIDTEMFGLMRTTSRSESEKAFFSNFTRS
                     AANLLTFMDGFESAMLKQRSKQESLDAQTIKKNPKFCLLDKMDNEEETEIYVVKEEKE
                     KTKEGSNEEKQFFHYKVLHNSKEGSMNKNIEEIPEKYIMRRWRRDIISPELRSRRNRY
                     GNENIVVQDSVNEITSVVYDCVELVGSDENMLKVILEKLKLLKKEVEAQVPKPSKKKD
                     DIIGNMIGVSKPRCANDKRLMSGKEKAIKESKKRKFTCGKCGRDDHNQRTCDKKKKKA
                     KEQAETSEI"
     misc_feature    172..>1452
                     /gene="LOC139842384"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggaagaag aatacgaagc aatggagcca gaaaacgaac caattgaagt agaatacgag
       61 attagtgatg aagaaattat agataacgct acaggtatag atacaccaat agtacgtaca
      121 acacgtaaaa aagaaacacc aggtggttca ttgtattatg caccaatcgt tgatgagagt
      181 ttactaccaa ttgttggaaa aaattatgaa acacttgaag agtgtgaaaa aatgtatagg
      241 ttatacgcgt ttcatgcatg ttttgacata cgaaagtcaa ctcaaaagac tacaaaatct
      301 gggttggtga agcagaaata ttacttgtgc aatagaggtg gtgtgccaat gcaagtgaac
      361 tttgacacat tgcaaagtag taaaaagcca attaggaaaa gcaacatgga atgcaccgga
      421 tgtagggcta gggttaaatt tgattgggtg tatggaacta atacgtttat actgtccgac
      481 tttcaagaac accataatca tgagttgcta ccccaagagt accgacattt aagtaaaaca
      541 gaaagacaga tgaagtatgc agagcagttg tttgtatacc attcgtcagt gtcaaatatt
      601 ggtccaacaa aagcatacga agtttatagc aatatgaaag ggtctgagaa aaatgtgcat
      661 gggactgtaa ctgatttcag aaactggaga cgagatttga atgtttttat caatgcaagt
      721 ggttctcaaa tgctcgttaa caaaatggaa gaacggaaga aatatgttcc tggtttttca
      781 tttgagtaca agcttgaaaa aagtcaacta cattcaattt tctgggccga tgaagttgca
      841 aaatgcaact acaaggagtt tagtgacata atctcatttg atgcaacgta tagaatgaat
      901 aggtacaaca tgaaatttgt accatttact ggcatagata accaccatag gtgtgtcact
      961 gttgctgcgg gattgatcag ggatgaaaca gccgagagtt acacatggct tcttacatgt
     1021 ttcatgaaga cattcgggaa agagccaaac atgatagtga cagatcagga caaatcaatg
     1081 gcgatagcga taaaagcagt ttttaagacg gcaaaacata gactatgcat gtggcacatt
     1141 atgcgaaagg tgccatcaaa gattcaagaa gcaattccta ctattgaaga tgaattagaa
     1201 aaagacttca agaatagact taataagctt gtttggaata tatcaacttg gataccagca
     1261 tattttatcg acactgaaat gtttggtttg atgcgaacta cttcaagatc tgagagtgag
     1321 aaagcttttt tttcaaactt tacaagatct gcagcaaatc tgttaacttt tatggacggc
     1381 tttgaatctg caatgttaaa acagaggtca aagcaagaat ctttggatgc acagacaatc
     1441 aagaaaaatc caaaattctg tttattggat aaaatggaca atgaggaaga aacggaaatc
     1501 tatgttgtta aagaggaaaa agagaagaca aaagagggtt cgaatgaaga aaaacagttc
     1561 ttccattaca aggtacttca taacagcaaa gaaggatcaa tgaacaagaa catagaagaa
     1621 atccctgaaa aatacataat gagacgttgg agaagggaca taatatcacc cgagttaaga
     1681 tcaaggagaa atagatatgg caatgaaaac atagttgtac aagattctgt taatgaaatt
     1741 acctcagttg tttatgattg tgtggaactt gtaggcagtg atgaaaatat gttaaaagtg
     1801 attcttgaaa aacttaaatt gttgaagaaa gaagttgaag ctcaagtgcc aaaaccgtca
     1861 aagaagaaag atgatataat tggaaacatg attggagttt caaagcctag atgtgcaaat
     1921 gataagcgtc taatgagcgg aaaagagaaa gcaataaagg aaagcaaaaa gagaaagttt
     1981 acttgtggta aatgtggacg tgacgatcat aatcagagga cctgtgacaa aaaaaaaaaa
     2041 aaagcaaaag aacaagcaga aacttcagaa atctga
//
LOCUS       XM_071832530            1674 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable
            serine/threonine-protein kinase PBL22 (LOC139842385), mRNA.
ACCESSION   XM_071832530
VERSION     XM_071832530.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1674
                     /gene="LOC139842385"
                     /note="probable serine/threonine-protein kinase PBL22;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139842385"
     CDS             1..1674
                     /gene="LOC139842385"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase PBL22"
                     /protein_id="XP_071688631.1"
                     /db_xref="GeneID:139842385"
                     /translation="MILILLIFLFTTISLATTDECILDIQPTSSCESPNWNGFIDKEC
                     CESPFESYLSALATRANQTGAIFLNPMQQQSCRSSLEGSNSRNLLTCGVEKLTAHSGS
                     CSGYSVTDVDKKFQSSLTGLNQDCELLESTNGCNSCLNRWLSLNMNTSVEETDICKFA
                     VLVTMVSKKTFDSNWVRAVYQCLGNNQLQNLVHQDAHQKHKEKLSIGLWILIGGLAGI
                     MILITTLWIYYRKRVTKRSPECKDGVCVLNLPNPKELSTKLTVKEVYAATNDLKESNF
                     IGEGNAGKVYKGVLANGQDVAIKHIVNDGEMETFVREITSLSPVRHPNLVRLLDHCEG
                     EGECFLIYELCHWGNLSEWLFSKDKVLTWIQRLQIAIDCARGLWFLHTYPGGSIVHRD
                     IKPTNILLNANFQAKLADFGLSKIIDTGLSHVSSEVRGTFGYVDPEYQKNSRVNPSGD
                     VYSFGIVLLQLLSGQRVINIDVQKPMPLGKMAKALTRGGSITEFADPKLNGDYSLKAF
                     ETMTNLALSCIGLKQQRPSMEQVVSGLEKALDISIRDRSLTPSFSSDIV"
     misc_feature    46..474
                     /gene="LOC139842385"
                     /note="Region: SPARK; pfam19160"
                     /db_xref="CDD:465984"
     misc_feature    829..1611
                     /gene="LOC139842385"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(829..840,847..849,853..855,889..891,895..897,
                     976..978,1024..1035,1174..1176,1186..1191,1195..1197,
                     1225..1230)
                     /gene="LOC139842385"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgatattga tcttactcat attcttgttc actacaatct cattggctac caccgatgaa
       61 tgtattctcg atatacaacc tacttcaagt tgtgaaagcc cgaattggaa cgggttcatc
      121 gacaaagaat gttgcgaatc acccttcgaa agctatctat ccgcattagc aacccgcgcg
      181 aaccaaacag gagccatttt cttgaaccca atgcaacaac aaagttgtcg atcttcatta
      241 gaaggtagca acagtagaaa tcttttaacc tgcggtgttg aaaagttaac tgcccattcg
      301 ggcagctgct cgggctattc agtgaccgat gttgataaaa agtttcagag ctcgttaacc
      361 ggtttaaatc aagactgcga gcttctggaa tcaacaaatg gttgtaattc atgtttaaat
      421 agatggctaa gtttgaatat gaacactagt gtggaagaaa cagatatttg taaatttgcg
      481 gttcttgtga ctatggtaag taaaaaaact tttgactcga attgggttcg agcagtttat
      541 cagtgtcttg gcaacaatca attacaaaat cttgttcatc aagatgctca tcagaaacac
      601 aaggaaaaat tgagcatagg attatggata ctaattggag gtttggcggg aatcatgatt
      661 ttaatcacaa cattgtggat ttattataga aaacgggtca cgaaaaggtc acccgagtgc
      721 aaagatggag tgtgtgtctt aaacttgcca aatccgaaag aattaagcac aaagttaacg
      781 gttaaggagg tttatgcagc tacaaacgat ctcaaagaat caaacttcat cggtgaagga
      841 aacgcaggta aagtgtataa aggcgtactt gcgaatggtc aggatgttgc gatcaaacac
      901 atcgtgaacg atggggaaat ggaaacgttc gttagggaga taacgagttt atctcctgta
      961 aggcatccga atctcgttag attattggac cattgtgagg gtgaaggcga gtgttttctt
     1021 atttacgagc tttgtcattg gggaaatctt tccgaatggt tgtttagtaa agataaagtg
     1081 ctaacatgga tccagcgtct acaaatcgct attgattgtg ctcgggggct atggtttctt
     1141 catacgtatc ctggtggatc cattgtacat cgcgatatta agccaacgaa cattctattg
     1201 aacgcgaact ttcaagcaaa gttagcagac tttggtttat caaagattat cgacacgggt
     1261 ttatctcatg ttagttcaga agtaagaggt acgttcggtt atgtggatcc cgagtaccaa
     1321 aagaacagtc gggtcaaccc gtccggggat gtttacagct ttgggatagt acttttacag
     1381 cttctttcgg gtcagcgggt gatcaatata gacgtacaaa aaccaatgcc gctcgggaaa
     1441 atggcgaagg cactaacgag aggaggaagt ataacagagt ttgctgatcc aaaacttaac
     1501 ggggactact cgttgaaggc gtttgaaact atgaccaatt tagcactttc gtgtatcggc
     1561 ctaaagcaac aaagaccatc aatggaacaa gtagtgtcag gactcgaaaa agctctcgat
     1621 atatccatac gagataggtc actaacacct tcattttcat cggacatagt ctag
//
LOCUS       XM_071832532             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842388), mRNA.
ACCESSION   XM_071832532
VERSION     XM_071832532.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139842388"
                     /note="uncharacterized LOC139842388; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842388"
     CDS             1..525
                     /gene="LOC139842388"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688633.1"
                     /db_xref="GeneID:139842388"
                     /translation="MRNKEVPNEVEIFVWRSNLNCLPTRVELDKGGVDLDSILSPSCQ
                     ACTESVEHILVHCTYVSKVWDQVIKWWNLENHRTSNIEEAFVINPNVISSNITKQIWQ
                     AVRWICGYIIWKHRNLENFSRKVWIILTILNEIQIQRFFWISKRLKKTKIDWHQWLIN
                     PNSYVVPQDRFGIG"
     misc_feature    <7..189
                     /gene="LOC139842388"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcgcaaca aagaggtccc caacgaagtt gaaatattcg tttggagatc aaatcttaac
       61 tgtctaccca ctcgtgttga acttgataaa ggaggagttg acctcgactc aatacttagt
      121 ccgtcatgtc aagcatgtac agaatctgtc gaacacattt tggtgcattg cacctatgtc
      181 tccaaggttt gggatcaggt tattaaatgg tggaaccttg aaaatcaccg tacatccaac
      241 atagaggaag cttttgtgat caaccccaac gttatcagct caaatatcac caaacaaata
      301 tggcaagccg tacggtggat atgcggatac atcatttgga aacatagaaa cctcgaaaat
      361 tttagcagga aagtttggat catattgaca attctaaacg agatccaaat tcaaagattc
      421 ttctggattt caaagcgact caaaaagacg aagatcgact ggcatcaatg gctaattaat
      481 cctaattcat atgttgttcc acaagatagg ttcggcatcg gctaa
//
LOCUS       XM_071832533             933 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842389), mRNA.
ACCESSION   XM_071832533
VERSION     XM_071832533.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..933
                     /gene="LOC139842389"
                     /note="uncharacterized LOC139842389; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842389"
     CDS             1..933
                     /gene="LOC139842389"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688634.1"
                     /db_xref="GeneID:139842389"
                     /translation="MCKPYRKSDFDHHYAILPRRILDSARTLTTVGINRWSRNHADRV
                     RYAYLTSNSAESMNALSVHARKLPITMLLEFFRASVQQWFWEHRNTADGLTTPVTPYA
                     ERKLGKRNRKSISWTAKPISQVKFEVLDMKKGGKVNLQDKTYTCKQWQFSGIPCGHVM
                     ALARYFVLRNVATHVQKYFHTETYKSAYMEDINPLDHISEWIDPGHLQTVLPPLVTKR
                     QSGRPKSTARIPSQGEDKDNFKSKRKCSRCLEYGHTRSTCTAHYDLSEGKQKSKCNSK
                     TKAKLKGLVKGKGKGKHEDSCSTQFGSTYNLSDD"
     misc_feature    424..504
                     /gene="LOC139842389"
                     /note="SWIM zinc finger; Region: SWIM; cl45927"
                     /db_xref="CDD:459272"
ORIGIN      
        1 atgtgcaaac cgtatagaaa atctgatttt gatcaccact atgctatact accacgacgt
       61 atcctagaca gtgcacgtac actcactact gttggcatca acagatggtc tagaaatcat
      121 gcagatcgtg ttcggtatgc ttacctaact tctaatagtg cagagtcaat gaacgcactg
      181 tcagttcatg cgaggaaact cccgattaca atgcttcttg aattctttag agcttcagtt
      241 caacaatggt tttgggaaca ccgaaacact gctgatggtt taacaacacc tgtcacacca
      301 tatgcagagc gtaagcttgg taaaagaaat cgtaagtcta ttagttggac tgccaaaccg
      361 atatcacaag ttaagtttga ggtattggat atgaaaaaag gcggtaaagt caatctacaa
      421 gataaaactt acacatgtaa acaatggcag ttttccggta taccctgtgg acatgtaatg
      481 gcactagcaa ggtattttgt cctacgtaac gttgctacac acgttcagaa gtatttccac
      541 actgaaacgt acaagtcggc atacatggaa gatattaacc cgctagatca tatttctgaa
      601 tggatagatc caggacacct acaaaccgtc ctaccgccat tggttacaaa gcgacaatcg
      661 ggtagaccga agagtactgc tcgtataccg tcccaaggag aggacaaaga taatttcaaa
      721 tctaaaagaa aatgcagtcg ttgcttggaa tatggacata ctagatcaac ttgcaccgca
      781 cattatgatc tttctgaagg taaacaaaag tccaagtgta actcaaaaac aaaggcaaag
      841 ctgaaggggt tggtaaaggg caagggtaaa ggaaaacatg aagactcatg ctcaacacaa
      901 tttggctcca cttacaattt gagtgatgat tag
//
LOCUS       XM_071832534            1170 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842390), mRNA.
ACCESSION   XM_071832534
VERSION     XM_071832534.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1170
                     /gene="LOC139842390"
                     /note="uncharacterized LOC139842390; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842390"
     CDS             103..1170
                     /gene="LOC139842390"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688635.1"
                     /db_xref="GeneID:139842390"
                     /translation="MTDIEVWFEAKVTIRSKMSLIREIKNKLTPAQTKIFIETCFGHW
                     LDIKCDDNDPGYIHCLLMNQTDRPKKFVINGREICEKPEELWFRVTRDHVIRCGRREF
                     CLVTGMRFGPVTSFIDWIGQERSDFDHSVSSRVFIKRHSGQRHISEFHDAFFKDELKG
                     TDKDKVIVAIALIINLCFLGKQLRDSVNDDMLLLLEDFELMNKYPWGSFLWTKLYNSL
                     HHVLVPYKERVADKTRKGVMTYHLSGFTWAFKMWIWEAYKHRIETYAFKPESEGIPRG
                     IHWKRKKKDDIPDEERPLNHLRPTKTEVKCEWWVASVNYFKDPDAKVPVKKVDDPKKF
                     DDETKKELTDMIKNLTKRLDD"
     misc_feature    340..738
                     /gene="LOC139842390"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 gattcaatca agagatcact tcaatagttt gtagataaac cctaattcca tcgtcagtgt
       61 atctatttcg tccctagatt caatcaagag ttcccttcaa agatgacaga tattgaggtt
      121 tggttcgagg ccaaggtcac cattcgaagc aagatgtctc ttataaggga gattaagaac
      181 aaactcactc cggctcagac aaagattttc atagagacgt gtttcggtca ttggttagat
      241 ataaagtgtg atgacaatga tccgggatac atacattgct tattaatgaa tcagactgac
      301 cgtccgaaaa agtttgtaat caacggacgc gaaatatgtg agaagccaga agagctatgg
      361 tttcgagtta cccgagacca tgtcattagg tgtggtagac gtgagttttg cttggttact
      421 gggatgcggt ttggtccagt tacatctttt atagattgga taggtcaaga gaggtcggat
      481 tttgaccact cggtttcatc tcgtgttttt attaaacgac atagtggtca acgtcatatt
      541 tcggagtttc acgacgcctt ttttaaagat gagttgaaag gaactgacaa ggataaggtc
      601 atagtcgcca ttgcgttgat aattaactta tgcttccttg ggaagcagtt gcgggatagc
      661 gtaaacgatg acatgcttct tttattagag gactttgagt tgatgaacaa gtatccgtgg
      721 ggttctttct tatggaccaa actttacaat agtttgcatc acgtgttagt accttataaa
      781 gagagggtag cagataaaac ccggaagggg gtaatgacat accatttgag cggcttcact
      841 tgggcgttta agatgtggat atgggaggca tacaaacacc gaatagaaac atatgctttc
      901 aagccggaaa gtgaaggcat acctcgtgga atccactgga aacggaagaa gaaagatgat
      961 atcccggacg aagaacgacc tctcaatcat ttgaggccca ccaagacaga ggttaagtgt
     1021 gagtggtggg ttgctagtgt aaactatttc aaggaccccg atgctaaagt accggtgaag
     1081 aaagttgatg atccgaagaa atttgatgat gagacgaaga aggagttgac ggatatgatt
     1141 aagaatttga caaagagatt agatgactag
//
LOCUS       XM_071832535            1050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides WAT1-related protein
            At1g70260-like (LOC139842391), mRNA.
ACCESSION   XM_071832535
VERSION     XM_071832535.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1050
                     /gene="LOC139842391"
                     /note="WAT1-related protein At1g70260-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842391"
     CDS             1..1050
                     /gene="LOC139842391"
                     /codon_start=1
                     /product="WAT1-related protein At1g70260-like"
                     /protein_id="XP_071688636.1"
                     /db_xref="GeneID:139842391"
                     /translation="METKYMVLAEVVPCILMVSMEVCTIGLTILASTILSKGLSPFVF
                     VVYTNALSSIFLLPYNKFIVRRNTSDELIPRFLLLGFIGVTMAQNLAFVGLSYSSPIV
                     AIGMGCLIPSISFILAVICRRTDFDLSSPSIRAKSIGTLISVIGAMLLIFYRGPVVKD
                     PSTHLLSSAPRLFIFLSTNEHWVLGCVLFAAASLAYSIWNIIQVETVEKCPDVMTVAS
                     SYSLFGTFQSALLAVFIERDPNVWRLQFDMGLLIIVSTAIFGSLIKSHVHMWCIQRKS
                     QFYVTMFKPLGVPIAGIFGSVFFAETFHYGSLMAAAVTAIGYYTMMWGQITENESRRG
                     KVDLSEERAPLLQEV"
     misc_feature    28..1038
                     /gene="LOC139842391"
                     /note="nodulin MtN21 family protein; Provisional; Region:
                     PLN00411"
                     /db_xref="CDD:177805"
ORIGIN      
        1 atggagacta aatatatggt gttagctgaa gtagtgccat gcattctaat ggtgtcaatg
       61 gaagtttgca ccattgggtt aaccatcttg gctagcacca ttttgtccaa agggctaagt
      121 ccctttgttt ttgttgtcta caccaacgcc ctctcttcca tctttcttct tccttacaac
      181 aagtttatcg ttcgcagaaa cacgagtgac gaacttatac cccggtttct tcttcttggt
      241 ttcatagggg taacaatggc acaaaatcta gcatttgttg gattaagtta tagttctccg
      301 atcgtcgcta ttggaatggg ctgtttaatc ccttccattt cattcattct tgctgttatt
      361 tgcagaagga cagacttcga tttgagtagt ccaagtattc gagccaaatc gattggtaca
      421 ttgatatcgg tcattggagc catgctgctc atattctaca ggggtcccgt tgtcaaggac
      481 ccttcgactc atctattatc atcggctcct cgactcttta ttttcttatc gacaaatgaa
      541 cattgggttc ttggttgtgt tcttttcgcc gcagcatcct tggcttactc catttggaac
      601 atcattcagg ttgagacagt tgaaaaatgt cccgatgtga tgacagtggc gtctagttat
      661 agcttatttg gtacttttca atcagctttg cttgctgttt tcatagaaag agaccctaat
      721 gtttggaggt tgcaatttga tatggggctt cttataattg tctcaacagc aatatttgga
      781 agtctaataa aaagccatgt acatatgtgg tgcatacaaa gaaaaagtca gttttatgtg
      841 actatgttca agcctctagg ggttccgatt gccggcatat ttggttctgt tttctttgct
      901 gaaacttttc attacggaag cttgatggcc gcagcggtga ctgcaattgg atattacacg
      961 atgatgtggg gtcaaattac agagaatgaa agtaggaggg gtaaagttga tttatcagaa
     1021 gaaagagccc ctcttttgca agaagtttaa
//
LOCUS       XM_071832536             942 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GCN5-related
            N-acetyltransferase 5, chloroplastic (LOC139842392), mRNA.
ACCESSION   XM_071832536
VERSION     XM_071832536.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..942
                     /gene="LOC139842392"
                     /note="GCN5-related N-acetyltransferase 5, chloroplastic;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:139842392"
     CDS             1..942
                     /gene="LOC139842392"
                     /codon_start=1
                     /product="GCN5-related N-acetyltransferase 5,
                     chloroplastic"
                     /protein_id="XP_071688637.1"
                     /db_xref="GeneID:139842392"
                     /translation="MAAISLSSSIDLHHHHHHHHHNLLNHRHLRHQPPYSRTHIINPK
                     FTPRFNLILTCSSQSSSSPTLKENPLPNGKFLSNPDLQKLEFLQSYKLFHKLPSGSML
                     LIRVMQEHEMDMTVELLAESFAESMMLPKAYVKLLAFLVKQYLTERRALMPHAATLIA
                     FHRRDTDDEGGETGDIQLAGTVEVSFDELGSNVSPPTPTPPKNAPYICNMTVKKSLRR
                     QGIGWQLLKASEELISQISTVREVYLHCRMIDSAPFNMYSKAGYSVFKTDSILILLTL
                     QRRKHLMCKQLPPALNIITETNTLYDVGDKNLEPIDA"
     misc_feature    310..861
                     /gene="LOC139842392"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; Region: yhbS; COG3153"
                     /db_xref="CDD:442387"
ORIGIN      
        1 atggccgcaa tctctctttc ttcatccatt gacctccacc atcaccatca ccaccaccac
       61 cacaacctcc taaaccaccg tcatctccgc caccaaccac cgtactcaag aacccacatc
      121 ataaacccca aattcacacc tcgtttcaat ctcatcctca cttgctcatc tcaatcttca
      181 tcatcaccaa cactcaaaga aaacccactt ccaaatggca aattcctatc aaaccctgat
      241 cttcaaaagc ttgaatttct tcaaagttac aaacttttcc acaaattacc atctgggtcg
      301 atgctattaa tccgtgtgat gcaagaacat gaaatggaca tgacagttga gttgttggct
      361 gaatcttttg cagaatctat gatgctgcct aaagcttatg taaagctgtt ggctttttta
      421 gtcaaacagt atttgactga aaggagagct ttaatgcctc atgctgcaac gttgattgct
      481 ttccatagaa gagatactga tgatgaaggg ggtgaaacgg gagatataca attagcaggg
      541 actgttgaag taagttttga tgagttaggg tctaatgttt cacctccaac tcctacccct
      601 ccaaagaatg caccttatat ttgtaatatg acagtcaaga agtccttaag aaggcaaggc
      661 atcggttggc aacttttgaa ggcaagtgag gaacttatat ctcaaattag tacggtcaga
      721 gaggtttatt tgcactgtag aatgattgat tcagctccat tcaacatgta ttcaaaagca
      781 ggatactctg tgttcaagac agatagcatc ttgatccttt taacattaca aagacgtaaa
      841 catttaatgt gtaaacaact tcctcctgcc ttaaacatca ttacagagac aaatacattg
      901 tatgatgttg gtgacaaaaa tcttgaacct atagatgcct ag
//
LOCUS       XM_071832537             690 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842393), mRNA.
ACCESSION   XM_071832537
VERSION     XM_071832537.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..690
                     /gene="LOC139842393"
                     /note="uncharacterized LOC139842393; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842393"
     CDS             1..690
                     /gene="LOC139842393"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688638.1"
                     /db_xref="GeneID:139842393"
                     /translation="MPLGFLNQLEKFKSFYDDDTQNEEEKGDTSNPEAEGIIKFNPPD
                     YMYLIGLGDGSDDLYPSWAECDKILIPVHFSDPEHFILLTLNLDEQRVLVYDSLKGCL
                     KKGQLEAVFKNLSDNLPLYLKAIDYFNKKQDSQIVDYYENREDVELMIEDAPYVPMQS
                     GGHGDCGVWVCLHMERIFFCWDKIDNIGDPKKAAKDYRIRMARTFFRARFDTQEPPPP
                     EDQRTQRLLIS"
     misc_feature    <187..606
                     /gene="LOC139842393"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 atgccattgg gtttcctcaa tcaactggag aaattcaagt ccttttatga tgatgacact
       61 caaaatgagg aggagaaggg ggatacatct aatcctgaag cagaggggat cattaaattc
      121 aatcccccag attatatgta tttgattggt cttggggatg gtagtgatga cctttatcca
      181 tcctgggctg aatgtgataa gattttgatt ccagtacatt tttcagatcc tgaacatttt
      241 atactactca ctttgaactt agatgaacag agagtattag tctatgatag tttaaagggt
      301 tgtttgaaaa aaggtcaact cgaggctgtc ttcaaaaact tatcagacaa cttgccgtta
      361 tatttgaagg ctattgatta ctttaacaag aagcaggact cacaaattgt tgactattat
      421 gagaacagag aagatgtaga gttgatgatc gaggatgcac cgtatgtgcc aatgcagagt
      481 ggtggccatg gtgattgtgg tgtttgggtc tgccttcata tggagaggat atttttttgt
      541 tgggataaga ttgacaacat tggagaccct aaaaaggctg ctaaggacta tagaattcga
      601 atggcaagaa cattcttccg tgcacgcttt gatacacagg aaccaccacc accagaggac
      661 cagaggaccc aaaggttgtt aattagttaa
//
LOCUS       XM_071832538             640 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842394), mRNA.
ACCESSION   XM_071832538
VERSION     XM_071832538.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..640
                     /gene="LOC139842394"
                     /note="uncharacterized LOC139842394; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842394"
     CDS             95..640
                     /gene="LOC139842394"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688639.1"
                     /db_xref="GeneID:139842394"
                     /translation="MNNNRALLKSPTLFQIPFSLNSPVLLHSNNKTHHQHSFVSVQFP
                     TQKLLSFHLKSPSGSPLLATKTSIKAEPTTPATEKFDLDDDFEDEFDDEFEDEEEEEE
                     DDDDIIVPLRNMREWTRNKPLGFGEGKVYDTSVEDKLLEELEQSKVAQIANINNLKKN
                     PEDGNPKKENLPKQKGFVFFT"
ORIGIN      
        1 gaagcatgct tttattttat ccgaaacaca aacctttgaa ctcattcata attgaatcct
       61 gtaatattat catcttttcg attcattagc aaccatgaac aacaatagag cactcttaaa
      121 atcacctact ctgtttcaaa tccctttctc actcaattcc cctgttctgc ttcactccaa
      181 taataaaacc caccaccaac attcttttgt ctcagtccaa tttcccacac aaaaattact
      241 ctcatttcat cttaaatcac catctgggtc ccctcttttg gccacaaaaa cttcaattaa
      301 agcagaaccc accactcctg caactgaaaa attcgatctt gatgatgatt ttgaggacga
      361 atttgatgat gaattcgaag atgaagaaga agaagaagaa gatgatgatg atataattgt
      421 tccactgaga aacatgaggg agtggactcg aaacaaacca ttagggtttg gtgaagggaa
      481 agtttatgat acaagtgtag aagataaatt acttgaagag ttagaacaga gtaaggttgc
      541 tcagatcgct aatattaata acctcaagaa gaatcctgaa gatggaaacc ctaagaaaga
      601 aaaccttcca aaacagaaag gttttgtttt ctttacttaa
//
LOCUS       XM_071832539             341 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842395), mRNA.
ACCESSION   XM_071832539
VERSION     XM_071832539.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..341
                     /gene="LOC139842395"
                     /note="uncharacterized LOC139842395; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842395"
     CDS             117..341
                     /gene="LOC139842395"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688640.1"
                     /db_xref="GeneID:139842395"
                     /translation="MDPQANHKSDADEDDENVKQLQQCSSLYLLLQDCLVNFNRNWKA
                     CQKEVQNLKLCNEKRQKAVKRSETTSSGSP"
ORIGIN      
        1 gtaaatacct atcattgatc ccttcagcta gtgacgacac tggcagattg actgatagaa
       61 attttggtac agttaattat ttaataaatc ctgctaattt tcacattata atcaaaatgg
      121 atccacaagc gaatcataaa agcgatgcag atgaagatga tgaaaacgtg aagcaactcc
      181 aacaatgttc ttctctctat ttattattac aggactgtct tgttaatttt aatagaaatt
      241 ggaaagcttg ccagaaagaa gttcagaatc tcaaattatg caatgagaaa aggcagaaag
      301 ccgtcaaaag gagtgaaacg actagcagtg gaagtccttg a
//
LOCUS       XM_071832540             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842396), mRNA.
ACCESSION   XM_071832540
VERSION     XM_071832540.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139842396"
                     /note="uncharacterized LOC139842396; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842396"
     CDS             97..804
                     /gene="LOC139842396"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688641.1"
                     /db_xref="GeneID:139842396"
                     /translation="MNSLFSRMAAAGIRFSFCTKLTRFDGTPKLKKTSSNMYHHHYNY
                     NNNLTLKVGGHCYYYSTTSSIGITKSKSKKTKKLVVDSSKTAAMNTIMEEDKNGGFFV
                     VRKGDIVGVYNSLTDCQAQVGSSVCDPPVSVYKGYAMPKGTEAYLQSHGLKDALYSIR
                     AVDLTEELFGRLVPCLFQHPPPISIGEPQRTFQEALASQTGRSCILEFDGACKGNPGP
                     SGAGAVLRSPDGILRYT"
     misc_feature    391..>462
                     /gene="LOC139842396"
                     /note="Caulimovirus viroplasmin; Region: Cauli_VI;
                     pfam01693"
                     /db_xref="CDD:460297"
     misc_feature    706..>792
                     /gene="LOC139842396"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 agtagcacca aaattcgaac aagaaacacg aaacccaatc aaatcgtcag gtgtttaatg
       61 ttacccggcg aaaaacgctt ctaatttttc caagctatga attcattatt ttcaagaatg
      121 gctgctgcgg gaattaggtt ttcattttgt acgaaactaa cacgatttga tggtactcct
      181 aaattgaaga aaactagtag taatatgtac catcatcatt ataattataa taataatctc
      241 acgcttaagg ttggcggtca ctgttactac tactctacta ccagcagtat tggtataact
      301 aagtcaaagt caaagaagac gaagaaatta gtagtagatt cttctaaaac agctgcaatg
      361 aacacgataa tggaggaaga taagaatggt ggtttctttg ttgttagaaa aggggatatt
      421 gttggtgtct acaacagctt aactgactgt caggctcaag ttggatcttc agtatgtgac
      481 cctcctgtga gtgtttataa aggttacgcg atgcccaagg gaactgaagc gtatttgcaa
      541 tctcatgggc ttaaagatgc tttgtactca atcagagccg tagatttgac agaagagtta
      601 tttggacggc tcgtgccgtg tcttttccag catccaccac ctatttccat tggcgaacca
      661 caaagaacct ttcaggaagc tttggcatca caaactgggc gttcttgtat tcttgagttt
      721 gatggggctt gtaaaggaaa tcccggccca tctggggcag gagctgtgct acggagtcct
      781 gacgggattt tgcgatatac ctga
//
LOCUS       XM_071832541             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842397), mRNA.
ACCESSION   XM_071832541
VERSION     XM_071832541.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139842397"
                     /note="uncharacterized LOC139842397; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842397"
     CDS             1..783
                     /gene="LOC139842397"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688642.1"
                     /db_xref="GeneID:139842397"
                     /translation="MGGGGGSSNPNSSSIWSYIIRVGLDFAKLGINFNQSFVREIGNG
                     RDTLFWDDLWFGDQRFKDKFPRLYQLESSKAICVSDRIHKDASGLTFTWQWSRMPNGR
                     TLNDVGQLQTSLDSMRFHSGDNDRWVWQLDNNEIFKSYTMASLLDEKLLHNSYQGQET
                     VRNKLLPKKIEIFAWRALKKRIPTRVELDKKCIDLDSVRCPVCDDDLETAEHALVFCR
                     FAMEVWARVFQWWNLGNVSTLSIAEIFKDERPYSSSHGNGII"
     misc_feature    <487..669
                     /gene="LOC139842397"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggggggg ggggggggtc ttctaatcca aattcaagtt ccatttggtc ttacattatt
       61 cgggtggggt tagattttgc taaacttggt ataaacttta accaatcttt tgtgagagaa
      121 attgggaatg gtagggacac tctattttgg gatgatcttt ggttcggtga tcaacgtttc
      181 aaggacaaat ttccaaggtt atatcaactt gaatcttcaa aagcgatatg tgttagtgat
      241 agaatacaca aggatgcctc aggtttaaca tttacatggc agtggtcccg gatgccaaat
      301 gggagaactc ttaatgatgt ggggcagcta caaacgagcc tcgactcaat gagatttcat
      361 tcaggtgaca atgatcgatg ggtttggcaa ttggacaaca acgaaatctt caagagttac
      421 actatggcct cattgctaga tgaaaagctt ctacacaatt cttatcaggg gcaggaaacg
      481 gttagaaaca aattacttcc aaagaaaatt gaaatctttg cttggagagc actcaaaaaa
      541 aggataccga cccgggtgga gctcgacaaa aaatgtatag atcttgactc ggtgaggtgt
      601 ccagtgtgtg acgatgactt agagacggca gaacacgccc ttgtgttttg taggtttgcg
      661 atggaggtat gggctcgtgt atttcagtgg tggaatctgg ggaatgtttc gaccctatct
      721 attgctgaaa tattcaaaga tgagcgtcca tattcttctt cacatgggaa cggtattatt
      781 tga
//
LOCUS       XM_071832542            1323 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides IAA-amino acid hydrolase
            ILR1-like 4 (LOC139842398), mRNA.
ACCESSION   XM_071832542
VERSION     XM_071832542.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1323
                     /gene="LOC139842398"
                     /note="IAA-amino acid hydrolase ILR1-like 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 29 Proteins"
                     /db_xref="GeneID:139842398"
     CDS             1..1323
                     /gene="LOC139842398"
                     /codon_start=1
                     /product="IAA-amino acid hydrolase ILR1-like 4"
                     /protein_id="XP_071688643.1"
                     /db_xref="GeneID:139842398"
                     /translation="MHISLTIIFTTLSLLLPLYSSNHETNNINPFLEHHNSSLKDYIL
                     KLAYHVETTNWIKNIRREIHEFPELAFEEIKTSSIIRRELDMMNIKYRWPVARTGVVA
                     IVGTGLPPFVALRTDMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAVKILKQ
                     LENELQGTVVLIFQPAEEQGEGAKAMIKEGVLENVEAIFGLHLVLSSDSGVVASRPGE
                     FLAGCGCFKAVIHGKGGHAAIPQDSVDPILAVSASIISLQNIVSREADPLNSPVVSVA
                     MVDGGSELNVIPDSVSIAGTYRAFSKKSFYALGERIHEVIQAQASVYRCSSIVDFEGI
                     EHPTVSPTINDKRIYEHVVKVSNMIVGKHYIKLTPPFMGSEDFAFYLEKIPGTFAFLG
                     MRNEKAGIIHSPHSPYYTVDEDVLPTGSALHAAFAFTYLLSTSNVCSL"
     misc_feature    166..1293
                     /gene="LOC139842398"
                     /note="M20 Peptidase Indole-3-acetic acid amino acid
                     hydrolase; Region: M20_IAA_Hyd; cd08017"
                     /db_xref="CDD:349938"
     misc_feature    order(424..426,430..432,532..534,604..606,1213..1215)
                     /gene="LOC139842398"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:349938"
     misc_feature    order(673..675,739..744,754..756,763..765,772..774,
                     823..843,853..858,862..864,880..888)
                     /gene="LOC139842398"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:349938"
ORIGIN      
        1 atgcatattt cactcactat tattttcacc actctttctc ttctccttcc tctatattct
       61 tcaaatcatg aaaccaacaa cataaacccc tttttggagc atcataattc ttcactaaaa
      121 gattatattc taaagcttgc atatcatgtt gaaacaacaa attggatcaa gaatataaga
      181 agggagattc atgaattccc tgaacttgct tttgaagaaa ttaaaacgag ctcaattatc
      241 cgacgagaac ttgacatgat gaatataaag taccgttggc cggttgctag gaccggagta
      301 gtggccatag ttggcaccgg tttaccaccg tttgttgcac ttagaacaga tatggatgct
      361 ttacctattc aggaacttgt tgaatgggag cacaaaagta agattgatgg taagatgcat
      421 gcttgtggac atgatgctca tgttgcaatg cttcttggtg ctgttaaaat cttgaaacaa
      481 ctagaaaatg aattacaggg gacggtggtt ttgatatttc aaccagccga agagcaagga
      541 gaaggagcaa aagctatgat aaaagaaggt gttctagaga atgtggaggc catttttggt
      601 ctacatttag tccttagctc agattcgggt gtggttgcat cccggccagg cgaatttctg
      661 gcgggatgcg gttgtttcaa ggctgtgatc catggcaaag gcggtcatgc cgccattcct
      721 caagattccg ttgatcccat tttggcggtt tcggcttcta ttattagctt acaaaatatt
      781 gtatctcgtg aggctgatcc cttaaattct cctgtggttt cagtagcaat ggtagacggt
      841 ggaagtgaac ttaatgtcat tcctgactcg gtttccattg ctggtactta tagagccttt
      901 agcaaaaaga gcttctatgc acttggagaa agaatacatg aggtgataca agcacaagca
      961 tcggtatatc gttgctcgtc tatcgttgat ttcgaaggaa ttgaacatcc gactgtgtca
     1021 ccaactatca atgacaagag gatatacgag catgtagtaa aagtctcaaa tatgattgtt
     1081 ggaaaacatt acataaaatt aactccacca ttcatgggaa gtgaagattt tgcattctac
     1141 ttggaaaaga ttccggggac atttgctttt ctcggaatga gaaatgagaa ggccggaata
     1201 atccattcac cccatagtcc ttattatacg gttgatgaag acgtactacc cacaggatct
     1261 gcattgcatg ctgctttcgc atttacatac cttttaagta catcaaatgt atgtagtttg
     1321 tag
//
LOCUS       XM_071832543             651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger protein 5
            (LOC139842399), mRNA.
ACCESSION   XM_071832543
VERSION     XM_071832543.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139842399"
                     /note="zinc finger protein 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842399"
     CDS             1..651
                     /gene="LOC139842399"
                     /codon_start=1
                     /product="zinc finger protein 5"
                     /protein_id="XP_071688644.1"
                     /db_xref="GeneID:139842399"
                     /translation="MGKSVSDLLSSTWEEGDGSDQHSTQTNVEKKLKIFGFEVHPWGE
                     GTSPKTNHFRLAEGDESVNSSSTTTEKNHTIDSKKFECQYCFKEFVNSQALGGHQNAH
                     KKERLKKKRLQLQARKARINYYLQPYTRNQHGFNFDFSGYYGSEFESNISLSSYDDDL
                     LSFKDPCNFTLTHVDSSRRNNYMPIAIKPSSQVVDLKKNYKGNLDLQLSLNSNSIM"
ORIGIN      
        1 atgggaaaaa gtgtttctga tcttctttca tcaacatggg aagaaggaga tggaagtgat
       61 caacactcaa ctcaaacaaa tgttgagaaa aagctcaaaa tatttgggtt tgaagtacat
      121 ccctggggtg agggaactag cccaaaaacc aaccatttta ggttagccga aggggacgaa
      181 agtgtaaatt cttcatcaac aacgacggaa aagaatcata ctatcgattc gaagaaattc
      241 gagtgtcaat attgtttcaa ggagtttgtg aattcacaag cattaggagg tcatcaaaac
      301 gcacacaaaa aagaaagatt gaagaaaaag aggttgcaac tacaagcaag aaaggcaaga
      361 atcaactatt acctccaacc ttatactcgt aatcaacacg ggtttaattt tgattttagt
      421 ggttattatg gttcagaatt cgaatcaaat attagtttaa gttcgtacga cgatgattta
      481 ttgtcgttta aagatccatg caattttaca cttacacatg tagatagctc aagaaggaat
      541 aactacatgc caattgccat taaaccctct tctcaagtgg ttgatttaaa gaaaaactac
      601 aagggtaatt tagatcttca attaagtttg aactccaact ctatcatgtg a
//
LOCUS       XM_071832544             882 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842401), mRNA.
ACCESSION   XM_071832544
VERSION     XM_071832544.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..882
                     /gene="LOC139842401"
                     /note="uncharacterized LOC139842401; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842401"
     CDS             1..882
                     /gene="LOC139842401"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688645.1"
                     /db_xref="GeneID:139842401"
                     /translation="MDPAMFQNPLFLHPSDGPGSLSIQEKLIGSQNYRSWRRSIEIAL
                     STKRKLGFVTGIVVRSADDLVKAEQWDTCNNMVISWIMNSVSDSIVKSIMFIGTASEI
                     WKQLAKRFTLSNGSRKYNLHKEVYSCEQQGSTVSDFYTKMKCIWEEIDSISDLPRIAK
                     VTPEITAFMTDVNLQKEEQHLFQFLNGLDDQYSALRSQLLMLNPLPSVEVACSMLQQE
                     ESQREMFTSVESTTLYNKCWEKIGYPPWHYKSRMASKQVNQRAKSAIVNAKKELQLLQ
                     LLKETMSSLLQKNLNSF"
     misc_feature    37..165
                     /gene="LOC139842401"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    235..666
                     /gene="LOC139842401"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggatccag ctatgtttca aaatcctctg tttcttcatc catcggatgg tccaggttca
       61 ttatctattc aagagaagct cattggatct caaaattaca gatcatggag acgttcaatt
      121 gaaattgcat tatccacgaa gcgtaagctt ggatttgtaa ctggaattgt tgttagatct
      181 gcagatgatc ttgtgaaagc tgaacagtgg gacacctgca acaacatggt gattagttgg
      241 atcatgaatt ctgttagtga ttcgattgtg aagtctatca tgttcattgg aactgcatcc
      301 gaaatatgga agcaattggc gaagaggttt actctaagca atggatctag aaagtacaac
      361 ttacacaaag aagtttactc atgtgagcaa caaggatcta ctgtaagtga tttctacact
      421 aagatgaagt gtatttggga agagattgat tctataagtg atcttcctag aattgctaaa
      481 gttacacctg aaattactgc tttcatgact gatgttaacc ttcagaaaga agaacaacat
      541 ctttttcagt ttcttaatgg tctagatgat caatacagtg ctctaagaag tcaattgtta
      601 atgctaaatc cactacctag tgttgaggtt gcttgttcta tgcttcaaca agaagaatct
      661 caaagggaaa tgtttacatc tgttgagtca actactttgt ataataagtg ttgggagaaa
      721 atcggttacc ctccatggca ttacaagagt agaatggctt ctaaacaagt caatcaaagg
      781 gctaagtctg caattgttaa tgctaaaaaa gaactgcaac tgctgcaact gttaaaggaa
      841 acaatgtcat ctttacttca gaaaaatttg aacagttttt ga
//
LOCUS       XM_071832545            2493 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 4
            (LOC139842402), mRNA.
ACCESSION   XM_071832545
VERSION     XM_071832545.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2493
                     /gene="LOC139842402"
                     /note="formin-like protein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842402"
     CDS             1..2493
                     /gene="LOC139842402"
                     /codon_start=1
                     /product="formin-like protein 4"
                     /protein_id="XP_071688646.1"
                     /db_xref="GeneID:139842402"
                     /translation="MAARIFQFILLVLFSFFILVHPSASQSTPQNIQVYFPIITPPLS
                     QPLPPASPSEESASSGSSSKTVVKAVVATATSSLVLSGVLFLFVFMFKRRSKKETSTR
                     TNLYAVDSNNINNNAINNNNKSSNQVLRKHDEFVRVGGIKGVIVEEQGLDVFYWRQLE
                     NNVSLVDEKNESCRGKNLNKGNRKSKFDPPVPEIPFLTGNSSSSHVCPLEDNIKNQYE
                     TLSDSFRLVNTPPKPLRNQEIIKSQPSLKSPPPPPPPPPPPPPPPPPPPPVKVERKID
                     VRPPPPQVLVVRKVEEPLPPPPPVVVQRKVDAPPAPPPPPLPPPSLVSIIRKDRARPP
                     PLPPTTNGLTMPPPPPKPPGPPSAKDNISLSYDNMVKLKPLHWDKVNASADHSMVWHK
                     LHNGSFRVDDDRIEYFFGSKTIDKKIATHGSSKLLSPNGQMRSVPSQVFLLDTRRSQN
                     IAIVIKSLAISRAKIIDRLQKGKGLDTDTLEKLTRISPTEEEVQLINQFEGNITKLAD
                     AESFLHHVLKAVPSAFTRVNVMLFKSNFRSDVSSVKKSLQTLEMACTELKTRGLFVKL
                     LEAVLKAGNRMNVGTSRGNAQAFNLNSLLKLSDVKSVDGKTTLLHFVVEEVVRSEGKR
                     CNIKRSNVGLTNGTFTESYYIKLGLPVVGGVSSKFSNVKKAAKIDYDSFSKSCSLLSC
                     QVEEIAITMEEFDRDGVGGFVSDMLTFLEEAKREIQVLKEDEGRIMGLVKKTNEYYQA
                     GSSKDIGGKQFQLFVIITSFLDMVDKACVDIATKMQKTRTGAGQADAGMKTSKSMGRP
                     SVKFPVLPESFKSSTSSSSDSNSDSSSSSDSD"
     misc_feature    1111..2295
                     /gene="LOC139842402"
                     /note="Formin Homology 2 Domain; Region: FH2; pfam02181"
                     /db_xref="CDD:396655"
ORIGIN      
        1 atggctgcaa gaatttttca atttatacta cttgttttgt tctcattttt tattttagta
       61 catccatcag cttctcaatc cactccacaa aacatccaag tttattttcc gataataacg
      121 ccaccattat cgcaaccgtt gccaccagca tcaccgtcag aagaatcggc ctcttcagga
      181 tcatctagta aaacggtagt taaagcagtt gttgcaactg ccacaagtag tttggtatta
      241 tcaggtgtct tgttcttatt tgtcttcatg tttaaacgtc gttctaaaaa agaaactagt
      301 actcgtacaa acttgtatgc tgttgatagt aataatatta ataataatgc gattaacaac
      361 aacaacaaga gcagcaatca ggttttgagg aaacatgatg aatttgttag agttggaggg
      421 attaaagggg tgattgttga agaacaagga cttgatgtct tttattggag acagcttgaa
      481 aataatgtga gtttggttga tgaaaaaaat gaaagttgca ggggaaaaaa cttgaacaaa
      541 ggcaatagaa agtcaaagtt tgaccctcct gtaccagaaa tcccatttct tacagggaat
      601 tcatctagtt ctcatgtttg cccactagaa gataatatca aaaatcaata tgaaactctt
      661 tctgattctt ttagacttgt taatactcct ccaaagcctt tgagaaatca agaaattatc
      721 aaaagtcaac catccttaaa gtcgccgcca cccccgccgc cacctccgcc acctccaccg
      781 ccaccgccgc caccaccacc tccagttaag gtagaaagaa agatagacgt acgaccacca
      841 ccacctcaag ttttggtcgt aagaaaggtt gaagaaccac taccaccacc ccctccagtt
      901 gtggtacaaa gaaaggtcga cgcaccacca gcaccacctc cacctccact accaccacca
      961 tcactagttt cgataataag gaaggataga gcacgaccac caccactgcc acctacaaca
     1021 aacggtttga ctatgccacc accaccaccg aagccacctg gaccaccatc agcaaaagat
     1081 aacatatctt tatcttatga caatatggtc aaattaaagc ccctgcattg ggataaagtc
     1141 aatgccagtg cggatcattc catggtgtgg cacaaattgc acaatggttc tttcagggtt
     1201 gatgacgatc gaatagaata ttttttcgga tccaagacta tcgacaagaa aatagcaacg
     1261 cacggatcaa gcaaattgct gagtccaaac ggccaaatga gatccgtccc gtctcaagtt
     1321 ttcttacttg acaccagaag atctcaaaac atagcaatag tgattaaatc attagccatt
     1381 tctagagcca aaataatcga ccgtctccaa aaaggcaagg gtctagacac ggacaccctt
     1441 gaaaaactca ctcgaataag cccgactgaa gaagaagtac aactaattaa tcaattcgaa
     1501 ggaaacatca caaagttagc agacgctgaa tctttcctcc atcatgtcct caaagctgtt
     1561 ccctcagctt ttactcgagt caacgtaatg ttgttcaagt caaactttag atcagacgtt
     1621 tcaagtgtga agaaatcttt acaaacacta gaaatggctt gtacagaact taagacacga
     1681 gggcttttcg tgaagcttct agaagctgtt ttaaaagcgg ggaatcgaat gaatgtggga
     1741 acttcgagag gaaacgcgca agcgtttaac cttaattctt tgcttaagtt atcggatgtt
     1801 aaaagcgtag atggaaagac tactctgctt cactttgtcg tggaagaagt cgttcgttcc
     1861 gaagggaaac gttgtaatat taaaagaagt aacgtaggct taactaacgg tacgtttaca
     1921 gaaagttatt acataaagtt aggattgccg gtagtaggag gagtgagttc gaagttttct
     1981 aacgtgaaga aagctgctaa aatcgactat gattcgtttt ccaaatcgtg cagtttgtta
     2041 agctgtcaag ttgaagaaat cgcaataact atggaggaat ttgatagaga tggtgtgggt
     2101 ggtttcgtga gtgacatgtt gacgtttctt gaagaggcga aacgggaaat tcaggtgttg
     2161 aaagaagacg agggtaggat aatggggcta gtgaagaaaa cgaacgagta ttatcaagca
     2221 gggtcttcga aggatatagg agggaaacag tttcaattgt ttgtgataat aacaagtttt
     2281 cttgatatgg ttgataaggc gtgtgttgat attgctacaa aaatgcagaa gacgagaaca
     2341 ggcgctggac aagcggatgc agggatgaag acgtcaaagt caatgggaag accgtcagtg
     2401 aagtttccgg tattgcctga aagttttaaa agtagtacaa gtagtagtag tgatagcaat
     2461 agtgatagta gtagttcaag tgattcggat taa
//
LOCUS       XM_071832546            1836 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842403), mRNA.
ACCESSION   XM_071832546
VERSION     XM_071832546.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1836
                     /gene="LOC139842403"
                     /note="uncharacterized LOC139842403; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842403"
     CDS             1..1836
                     /gene="LOC139842403"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688647.1"
                     /db_xref="GeneID:139842403"
                     /translation="MTSQGSNEVGSSSNFEVGSTSTHVGVVGKSKDYRVIKGGKKMKT
                     KTSGGPENGKKEKDKCEWVLLVSKVQPSETWQVKTYNPIHECLQTRDIKHCTSHFLSK
                     KLLEELPSNPKIPTKAVRAKYEASLGINITHMKAYRALREATGIIQGDYKEQYSHIRN
                     CALELKRSNPDITVRYQHESAQPNDPTRVFKRIYICLGPLKKGFAVLGRDLIGLDGCF
                     MKQPAQGHILTAVGVDSNNGIYPVAFAIVEQECYSSWKWFLEWLGQDLNLESNSNYTF
                     ISDRQKGLLNAVEELFPCAEHRFSYKNHLWRCASATTVPEFELAMNQLKEFNKDCHKW
                     LTDIPPHQWARSHFSGRAVSDVLLSNMCEVFNRWLIDARDKPIVTALEYIREYLMKRI
                     VNVLKHQSKCDGPLTPAATKTFEKIKEKASQCSILWNGGQQYQVTGPHGRQCVVDMGR
                     RECACRKWELTGMPCKHAVASLNNMAFNNQQVGVPEEWVHQVYWLMRWKETYKFHIVP
                     LNGKSMWPKSNDPTKILPPLKIATVGRPKNNRRKSAEEISEMNEKGKLSRKGKSKQCG
                     KCGTYGHNKRGCPNEASTCVGTKTSSKRKRGKGAQSQTNDAAGLM"
     misc_feature    631..897
                     /gene="LOC139842403"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    1357..1434
                     /gene="LOC139842403"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgactagtc aaggttcaaa tgaggtgggg tcaagtagta actttgaggt ggggtctact
       61 agcacccatg tgggggtagt tgggaaatca aaagattaca gagttattaa aggtggtaaa
      121 aagatgaaaa caaaaacaag tgggggacca gaaaatggca agaaggaaaa agacaaatgt
      181 gaatgggttc ttcttgtttc caaggtacaa ccaagtgaaa catggcaagt caaaacttac
      241 aaccctattc atgaatgtct tcaaaccaga gatattaagc attgtacatc tcatttcctg
      301 tcaaagaaat tgcttgagga actgccatca aacccaaaga ttccaacaaa agcagttagg
      361 gcaaaatatg aggcaagtct tggaataaat atcacccaca tgaaagcata cagagctttg
      421 agagaggcaa ctggtattat ccaaggggat tataaggagc agtattcaca tataagaaac
      481 tgtgctttag aactcaaaag atctaatcca gatataacag ttagatacca acatgagtct
      541 gcacaaccca atgatcccac aagggttttt aagagaattt atatttgttt aggaccacta
      601 aagaaaggtt ttgcagtgtt aggtagagat ttgataggtc tagatggatg ttttatgaaa
      661 caacctgcac aaggtcatat tctaactgct gttggggtgg attccaacaa tggcatatat
      721 ccagttgcat ttgccattgt tgaacaggaa tgttactcat catggaagtg gttcttggag
      781 tggttagggc aagatcttaa tcttgaatca aattcaaatt acaccttcat ttctgataga
      841 caaaagggtc tgttgaatgc tgttgaagaa ttgtttcctt gtgctgagca cagattctct
      901 tacaaaaatc atttgtggag gtgtgcatct gcaactactg taccagaatt tgagctagca
      961 atgaatcagc taaaggaatt caataaagat tgccacaaat ggttgactga tattcctcct
     1021 catcaatggg caaggagtca cttttcagga agagctgttt cagatgtcct gctaagcaac
     1081 atgtgtgagg tcttcaatag atggcttata gatgcaagag ataagccaat agtgactgct
     1141 ttggaataca taagagaata tttaatgaag aggattgtca atgttttgaa gcaccaatct
     1201 aaatgtgatg gaccattaac acctgctgca acaaaaacct ttgaaaagat caaggaaaaa
     1261 gcatctcagt gttctatttt atggaatggt ggacaacaat atcaagtaac tgggccccat
     1321 ggtagacaat gtgttgtgga tatgggaagg agagaatgtg catgtaggaa atgggaatta
     1381 actggaatgc catgtaaaca tgcagtggca tctttaaaca acatggcatt caataatcag
     1441 caagtaggag tgcctgaaga atgggttcat caagtatact ggttaatgag atggaaggag
     1501 acttacaagt ttcacattgt accattgaat ggtaaatcaa tgtggcctaa atcaaatgat
     1561 ccaacaaaga tattaccacc cttgaagata gctactgtag gtaggcctaa aaataacagg
     1621 aggaagtctg ctgaggaaat ttcagagatg aatgaaaagg gaaaactttc aagaaaaggt
     1681 aagtcaaaac aatgtgggaa gtgtggcaca tatggacaca ataaaagggg ctgcccaaat
     1741 gaagcatcaa catgtgttgg aacaaaaaca agttcaaaga ggaaaagggg gaaaggggct
     1801 caatcccaga ctaatgatgc agcaggtctg atgtaa
//
LOCUS       XM_071832547            1171 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein COFACTOR ASSEMBLY OF
            COMPLEX C SUBUNIT B CCB4, chloroplastic (LOC139842404), mRNA.
ACCESSION   XM_071832547
VERSION     XM_071832547.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1171
                     /gene="LOC139842404"
                     /note="protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B
                     CCB4, chloroplastic; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139842404"
     CDS             1..903
                     /gene="LOC139842404"
                     /codon_start=1
                     /product="protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B
                     CCB4, chloroplastic"
                     /protein_id="XP_071688648.1"
                     /db_xref="GeneID:139842404"
                     /translation="MEAGRSLLLRSVTINYHNNSHYYSCNRLRSFRRKFIRVSANLQN
                     GGYKGARPNRELIADWVANNDDAVRSLPIYVGGISLLGVLFNRTISGIAPVADASSSQ
                     SRADLLTIGLAVTNILAGLVWLSIRPKSISVVPPQGVECERIHSNIPDIVASELSWGW
                     ETLSAVTCCRSLVIVYDGICVLQIGYASVSSSNEAEPMVVDSDKLMQGSIYQGVIKAG
                     SQSYLANLSLYPGKSQLPFLPSNTQSVILQPLGDKGIAILGGDTIRGFTASDQAWITL
                     IGEKLDATLSKHMTSVPLASGNAR"
     misc_feature    214..843
                     /gene="LOC139842404"
                     /note="Cofactor assembly of complex C subunit B,
                     CCB2/CCB4; Region: CCB2_CCB4; pfam11152"
                     /db_xref="CDD:431685"
     polyA_site      1171
                     /gene="LOC139842404"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggaagcgg gaagaagttt gttacttcgt tcagtaacga ttaactacca caacaacagt
       61 cattattact cctgtaaccg tctccgttct tttcgccgga aattcattag ggtttcggct
      121 aacttacaga atggaggtta taaaggagca aggccaaata gggaattgat tgctgattgg
      181 gtagccaata atgacgatgc tgttaggagc ttgccgattt acgtaggagg aatctctctg
      241 ttaggggttc tgttcaacag gacaatttct ggaatagctc ctgtagctga tgccagcagt
      301 tcgcagtcca gggctgatct acttacaatt gggttagcag taactaatat tctagctggt
      361 ctggtgtggc tatcaattag acccaagtcc atatctgtgg taccgcctca aggtgtggag
      421 tgtgaaagaa tacattctaa cattccagat attgtcgctt ctgaattatc atggggttgg
      481 gaaacattgt cagcggtcac atgctgcaga tcacttgtta tcgtatacga tggcatttgt
      541 gttctccaaa ttggatatgc ttctgtatcg tcttctaatg aagctgaacc tatggttgtt
      601 gattctgata agttgatgca aggatcaatt tatcaaggtg ttattaaagc tggatcacag
      661 agctatttgg caaacttatc tctttatccc ggaaaatctc agctgccatt tctcccttca
      721 aatacacagt cggtcatctt gcaaccactg ggagataaag gaattgcaat acttgggggt
      781 gacaccatcc gtggcttcac ggcatctgat caggcatgga tcacattaat aggagagaag
      841 ctggatgcta cactttctaa gcatatgacc agtgtccctt tggcaagtgg caatgcaaga
      901 taatgctgct cttagttgcg agggtaagtt tctacaggac cacgtttttt gaagctatgg
      961 tatgtcatct tagttttaaa agatcattat taagatcaag aggttacacg atctccaaag
     1021 atgttaatct tttattcagc tctttgtttt tttataaact caaatgtagg aaaagaatga
     1081 tacccataag ataccttttc tattgacagc ttacctgatt tggaagataa ctgtatattg
     1141 tagtgttctt aaatgaataa gttgtttcat c
//
LOCUS       XM_071832548             792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842405), mRNA.
ACCESSION   XM_071832548
VERSION     XM_071832548.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..792
                     /gene="LOC139842405"
                     /note="uncharacterized LOC139842405; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842405"
     CDS             25..792
                     /gene="LOC139842405"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688649.1"
                     /db_xref="GeneID:139842405"
                     /translation="MEVMKLSKFKLKLQTLITEVRELREKEGVSSDQLHNHVQEQKQN
                     VEGLCSKIVELEADLASSVEHGQKLQRKVQFLEEENYLLESKHKELKETINSILQAKE
                     SFVKAYQESTCEMKRSIESRDRKIAMLSEKINTHLSSLESIRKEASLVKQVVDSAQRA
                     VAEKEEVVTHLKKEMDKVCAFENLFIGKINDLESRLKSNENEFQRKDMVIAKLQTQLE
                     TAKLTDQSPSIEEISMPYHLYSRYLFILDIYNIAISI"
     misc_feature    <34..>693
                     /gene="LOC139842405"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      
        1 acggaattgg cagtggaggc aaaaatggag gtgatgaaat tatcaaaatt caagttgaag
       61 ctccaaaccc taataacgga agttcgtgag ctcagagaaa aagaaggcgt ttcatccgat
      121 caacttcaca atcatgttca ggagcaaaag caaaatgttg aaggattatg tagtaagata
      181 gtggaattgg aagcagattt agcttcatct gttgaacatg gccaaaaact tcaacgcaag
      241 gtgcagttcc ttgaagaaga aaactatttg cttgaaagca agcataaaga actgaaggaa
      301 acaattaaca gcattcttca ggcaaaagaa agtttcgtga aggcttacca ggaatctaca
      361 tgtgaaatga aaagatccat tgaatccaga gatagaaaga ttgccatgct ttctgagaag
      421 ataaatactc acctttcatc attggaatca atacgaaagg aggcatcttt ggtcaagcaa
      481 gtggtggata gtgcccaacg tgctgttgct gagaaagagg aagtagtgac tcatttaaag
      541 aaagaaatgg ataaagtatg tgccttcgag aacttattca tcggaaaaat caatgacctt
      601 gaaagtagac ttaaaagtaa tgagaacgag tttcagagga aggacatggt gattgcaaag
      661 cttcagacac agttggagac tgcaaaacta actgatcaaa gtccatcaat agaggagata
      721 tccatgccat accatcttta ttctagatat ttatttatac ttgatattta taatatagct
      781 attagcatat aa
//
LOCUS       XM_071832549            2292 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides exocyst complex component
            EXO84A-like (LOC139842407), mRNA.
ACCESSION   XM_071832549
VERSION     XM_071832549.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2292
                     /gene="LOC139842407"
                     /note="exocyst complex component EXO84A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139842407"
     CDS             1..2292
                     /gene="LOC139842407"
                     /codon_start=1
                     /product="exocyst complex component EXO84A-like"
                     /protein_id="XP_071688650.1"
                     /db_xref="GeneID:139842407"
                     /translation="MKKNKNEKEKGRIESEFGIMSSLPEGSFSSTAGDLDFGQEVTLS
                     DKLKVFKSSGFDPENYVSTKCRTTSEKEIKHLVTCLLDLKKASAEEMRKSVYANYPSF
                     IRVSREISDLEGQLVALRNFLSNRASIIHNLAEGAGVESMSSGPGSKKDVSFDFEDKE
                     PSKMELWLTQYMDNLKVLLAERRVDEALAALDEGERVAKEEEKSMTSSMLSSLRANIT
                     AQRQKLADQIAESACQPSSSGIELRSYVEIIKRLGDGPRAHTLLLNSHHQKLQSKIQG
                     LQTTGSTYGVAYTAALSQLMFSIIAQASSDSLAIFGDQPLYTSELVTWSVKQTNTFAH
                     LMKRHVIASPSASGGLRTVAECVQISMGHCYLLEARGLALAPVLLRHFRPCVEQALNA
                     NLKRIERSTAALAAADDWSLNYSRALGTTVSSIGSQPKLSSSAHRFNVMVQEMCEDIG
                     LLRSSQFSNRAMEGLVQVFSSYVHMLVNALPGTSETENLEGRIVKTADDDSQQIALLA
                     NALMLAEELLPRAAIKLLPLQQCIPSDTPRKTSDRQLRTPEQRELKKRLQRLVDQLRD
                     SFCRKHALDLIFTEEGSACINAQMYLSMDENSQEPEWFPSPIYQELFIKLCTVATLAT
                     DMFVGRERFTTLLLIRLTETVILWLSDEPSFWEEVEHGSKRLGPFGLRQFYLDMQFVI
                     LFASQGRYLSRNLHQVIKNIISRAMDSVAGSDTDPNSLLPEDQWFTDIGQAAIKMLTG
                     NDAVENVEDTSPTASMSVTSQGE"
     misc_feature    148..375
                     /gene="LOC139842407"
                     /note="Vps51/Vps67; Region: Vps51; pfam08700"
                     /db_xref="CDD:462568"
     misc_feature    499..1116
                     /gene="LOC139842407"
                     /note="Exocyst component 84 C-terminal; Region: Exo84_C;
                     pfam16528"
                     /db_xref="CDD:465161"
ORIGIN      
        1 atgaaaaaga ataagaacga aaaagaaaag ggacgaattg aatcggaatt cggaataatg
       61 tcttcgttac ctgaaggctc attctcatct actgcagggg atcttgattt cggtcaggag
      121 gtaacgctga gtgataagct taaagtcttc aaatcttctg gtttcgatcc agaaaattat
      181 gtatctacca aatgtcgtac aactagcgaa aaggaaataa agcatttggt tacttgtctt
      241 cttgatctaa agaaggcttc cgcggaagaa atgagaaaaa gtgtttatgc caactaccct
      301 tccttcattc gtgtatcaag ggagatttcg gatcttgaag ggcaactagt agccttgagg
      361 aattttttat cgaaccgtgc gtctatcatt cataatctag ccgagggtgc aggggtcgaa
      421 tccatgtctt ctggtcctgg ttcaaaaaaa gatgttagtt tcgactttga agataaagaa
      481 ccttcaaaga tggaactttg gctaacccaa tatatggaca acctcaaagt tttactagcc
      541 gaaagaaggg tagatgaagc tttagccgcc ctagatgaag gagaacgtgt cgctaaagaa
      601 gaagaaaaat ccatgacatc atcaatgctt tcttcgttac gagctaacat cactgcacaa
      661 cgacaaaaat tagccgatca aattgctgag tcagcgtgtc aaccatcttc tagtggtatc
      721 gagcttcgat cgtatgtgga aataatcaaa cgactcggtg atggtccacg agcccatacg
      781 ctgctcctta actcacacca ccaaaagtta caatctaaaa ttcagggtct tcagacaaca
      841 gggtcaactt acggtgtggc ttacacggct gcactttcac agctcatgtt ttcgatcata
      901 gctcaagcgt caagtgattc tttagccata tttggtgatc aaccgttgta cacgtcggaa
      961 cttgtgacat ggtcggttaa acagaccaac acttttgcac atcttatgaa gagacacgtc
     1021 attgcttcac catctgcttc tggtgggcta cgaactgtag ccgagtgtgt tcaaatctct
     1081 atgggccatt gttatctgtt agaggctcgt gggttggcac ttgcacctgt tcttctcaga
     1141 catttcagac cgtgtgttga acaagcgtta aatgctaact tgaaaagaat cgaacgaagc
     1201 actgctgctt tagcagctgc agatgattgg tcacttaatt attcacgcgc gctcggtacc
     1261 actgtttctt caattggatc ccagccgaag ctttcaagta gcgcccatag atttaatgtc
     1321 atggttcagg aaatgtgtga ggacattgga ctgctgaggt cgtctcagtt ttcaaaccgg
     1381 gcaatggaag gtctagtaca agttttcagc tcatatgttc acatgcttgt aaacgcactg
     1441 cctggtacat cagaaactga aaatttggag ggtagaattg tcaaaacagc agatgacgac
     1501 tcacaacaaa tagcgttgct agctaatgca ctaatgttag cagaagaatt gctccctcga
     1561 gcagccataa agttgttgcc tttacaacag tgtattccct ctgatacccc tagaaaaact
     1621 tcagacagac aattacgtac gcccgagcaa agagaattaa aaaaacggct tcaaagactt
     1681 gttgaccaat tgagagatag tttctgtaga aaacatgctc ttgatctcat ctttacagaa
     1741 gaggggagtg cttgtattaa cgcgcaaatg tacttaagta tggacgagaa ctcacaagag
     1801 cccgaatggt tcccttctcc aatatatcag gaactgttta tcaagttatg tacggtcgca
     1861 accttagcga cagacatgtt tgtggggaga gaaaggttta ccacccttct tttaattaga
     1921 ctcacagaaa cagtgatttt atggctatct gatgaaccaa gtttttggga agaggttgaa
     1981 cacgggtcaa agcggctagg accatttgga cttcgacagt tttatttaga tatgcagttt
     2041 gtaatacttt ttgcgtcaca agggcgttac ttatcacgaa atttgcatca agttatcaag
     2101 aatatcatct caagagctat ggactcggtt gctggttccg atacagatcc gaatagtttg
     2161 ttgcccgagg atcaatggtt tactgatatt ggtcaagctg caatcaagat gttaaccggg
     2221 aatgacgctg tggagaacgt agaagataca agtcctacag cttccatgtc agttacatct
     2281 caaggggagt aa
//
LOCUS       XM_071832551            2232 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842408), mRNA.
ACCESSION   XM_071832551
VERSION     XM_071832551.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2232
                     /gene="LOC139842408"
                     /note="uncharacterized LOC139842408; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842408"
     CDS             1..2232
                     /gene="LOC139842408"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688652.1"
                     /db_xref="GeneID:139842408"
                     /translation="MKRCFIFVSRYCCQILCHHLQIQTASSFACSPFDIARRKFSSVS
                     ARHFPDYSPKKPTIKDSQLVYNICTTIKQRRFEPIERILKPYESKFKLDHFIWVLMEI
                     KHEYNLVLNFFDWLCIRRAPSLEARCIIIQISVAAKDPKVAHELIHEFWSKPNVDSSL
                     PFSLFMEKLIYTYKDWGSNPHVFDIFFEVLVEVGILDGAKKLFFKMLNYGVVISVDSC
                     NVFLSRISENIDGCRKTPHIFTEFLKEGVKWNTMSHNMMIHCLCRMGKVKEAHNLLFQ
                     MVFRGCMLDAISYSTMVNGYCQIGEYHIVMKLIEEMKIKGLKPNMFTINSVVYLLCKI
                     GRTVDADKVLREMIYQNITPDKVVYTTLIDGFCKNGNVIGAYRLLEEMHSNNICPDLV
                     TYTALLSGLCRTGNIQKAHNLFLEMCDREMKLDEITCTVLIDGYCKNGQIKEAFSLHN
                     QMVEMGLTPNLVTYTSLVDGLCKQGEIDTANELLHEMCSKGLELNICTYNSLVNGLCK
                     VGNIVQALKLVEDMEVAGINPDAYTYTTLIDAHCKSGDMVKAHELLRQMLDNGIQPTV
                     VTFNVLMNGFCLSGMLKDGASLLKWMLEKRIMPNATTYNSIMKQYCIRNDMRATAEIY
                     KEMLGKGISPNANTYEILIRGHCKARNMKEVWFLHKEMVEKGFDLTVNAYNALIKGYI
                     KRKKHTEARNLFEEMRNKGLVADRELYSYFMDMNYNDGNLDLTLELCDEAIEKNIVDK
                     IGD"
     misc_feature    748..894
                     /gene="LOC139842408"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    757..840
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    862..945
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    <916..>2034
                     /gene="LOC139842408"
                     /note="maturation of RBCL 1; Provisional; Region:
                     PLN03218"
                     /db_xref="CDD:215636"
     misc_feature    967..1050
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1072..1155
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1177..1260
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1276..1365
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1381..1470
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1486..1569
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1591..1680
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1696..1785
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1801..1890
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1906..1995
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2008..2142
                     /gene="LOC139842408"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:463778"
     misc_feature    2011..2100
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2116..2205
                     /gene="LOC139842408"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgaagcggt gttttatctt cgtctcaaga tattgttgtc agatattatg tcaccacctt
       61 caaattcaga cggcttcttc tttcgcatgt tcgccatttg acatagcaag gcgtaaattc
      121 tcttccgtta gtgcaagaca cttccctgat tattccccca aaaaacctac aataaaagat
      181 tctcaacttg tctacaacat ctgcaccacc attaaacaac gtcgttttga gcccattgaa
      241 cgaattctga agccatatga atcaaagttt aaactcgacc actttatttg ggttctaatg
      301 gagataaagc acgagtacaa cttagtacta aatttctttg actggttgtg catacgtaga
      361 gctccatcac tcgaggctcg ttgcatcatc attcagatat ctgttgctgc aaaggaccca
      421 aaagtagctc atgaacttat tcatgaattt tggagtaaac ctaatgtaga ttccagcctt
      481 ccattttctc ttttcatgga aaagttgata tatacttaca aggattgggg ttcaaatccc
      541 catgtttttg atattttctt tgaagtcctt gttgaagttg gaatactcga tggagccaaa
      601 aaactattct ttaagatgtt aaactatggg gtggtaatat ctgttgattc atgtaacgtt
      661 ttcctctcac ggatatcaga gaatattgat ggatgtagga aaacaccaca tatttttact
      721 gaattcctta aagagggtgt taaatggaat actatgtcac ataatatgat gattcattgc
      781 ctttgtcgaa tggggaaagt gaaagaagct cataacttac tctttcaaat ggtgtttcga
      841 gggtgcatgc ttgatgctat tagttatagc acaatggtaa atgggtactg tcagatagga
      901 gagtatcaca tagttatgaa acttatagaa gaaatgaaaa taaaaggatt gaagccgaac
      961 atgtttacta ttaacagcgt ggtttacctt ttatgtaaga ttggtagaac ggttgatgca
     1021 gataaggttc ttagggagat gatataccag aatataactc ctgataaggt tgtttataca
     1081 acgctaattg acggtttctg caaaaatggg aacgttattg gtgcatatag gttgcttgag
     1141 gagatgcaca gtaacaatat ttgtcctgat cttgtaacat atactgctct tttgtctggt
     1201 ctttgtagaa cgggtaatat acagaaagca cacaatctgt ttcttgaaat gtgtgataga
     1261 gaaatgaaac tagatgaaat cacttgtaca gtacttattg atggttactg caagaatggt
     1321 caaataaagg aggcattttc acttcataat cagatggttg agatgggttt aactcccaat
     1381 ctcgtgactt acacgtctct cgttgacggg ttatgcaaac aaggggagat agatacagca
     1441 aatgaacttt tacatgaaat gtgttctaaa ggtcttgaat tgaatatatg cacgtataat
     1501 tctcttgtta atggtctttg taaagttgga aatattgtac aagcattaaa gctagtagaa
     1561 gatatggagg tcgcaggcat taatccagat gcttatacgt acacaactct tatagatgct
     1621 cattgcaaat caggagacat ggttaaagct catgaacttc ttagacaaat gttggataac
     1681 gggattcagc ctacagttgt tacgtttaat gttttaatga atgggttctg cttgtcgggg
     1741 atgttaaaag atggtgcgtc tcttcttaaa tggatgttgg aaaaacgtat catgccaaat
     1801 gccacaacgt ataattcaat tatgaagcag tactgtatcc gaaatgatat gcgtgctaca
     1861 gctgaaatct acaaagaaat gttagggaaa ggtatatccc caaatgctaa cacatacgaa
     1921 atactaataa gaggccactg caaggcaaga aacatgaaag aggtgtggtt tttgcataaa
     1981 gaaatggtag agaaggggtt tgatttgact gtaaatgctt ataatgctct catcaagggt
     2041 tatatcaaga ggaaaaaaca tacagaggcc agaaatttgt ttgaggaaat gaggaataaa
     2101 ggtttagttg ctgatagaga gttatacagt tattttatgg atatgaatta taatgatggg
     2161 aatctagatt tgacgcttga gctgtgtgat gaagcgattg agaaaaatat tgttgataaa
     2221 attggtgact ga
//
LOCUS       XM_071832552            2079 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides HIPL1 protein-like
            (LOC139842409), mRNA.
ACCESSION   XM_071832552
VERSION     XM_071832552.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2079
                     /gene="LOC139842409"
                     /note="HIPL1 protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842409"
     CDS             1..2079
                     /gene="LOC139842409"
                     /codon_start=1
                     /product="HIPL1 protein-like"
                     /protein_id="XP_071688653.1"
                     /db_xref="GeneID:139842409"
                     /translation="MEAFLSFSPLLCLFLLMYPHPSSSLPMCTNLRAPVIAKEPLAFC
                     PYKQEKVCCDSTKDSKLQMQFEAMNISNPDCASVIKSILCATCDQYSANLFKVESQIR
                     SVPVLCDSPNSADSSLSKQSETSFCMMVWDTCQNISMQNSIFAPSLQGIGGLPQNTSS
                     KLTDLWQSRTDFCTSFGSKPDETTQCFNGSPIQLNTTTQTPIPPNGLCLERLGDKGYI
                     NMAAHPDRSDRAFFSDLPGKIWLATIPTHGSGEPLGLDESNPFVDLTDQVKFDTVFGL
                     MGIAFHPKFAENGRFFASFNCDKETSSTCSGRCGCNSDVGCDPSKLVSSSTADHPCQY
                     HNVVAEYTVNGTSSDPAKATKGDPIEVRRIFTMGLPFTNNHGGQILFGPTDGYLYIML
                     GDGGGRNGPLGFAQNKKSLLGKIMRVDVDTIPKETDDDLNLWGNYSIPQDNPYSEDKD
                     MLPEIWALGFRNPWRCSFDSERPSYFLCADIGQDRYEEIDVITKGGNYGWSIYEGHLL
                     VNSSKENTSVDTDLIFPAMGYNHNDVNKKEGSAAISGGYFYRSTTDPCMYGSYLYADL
                     YATALWAAAETPTNSGNFTTTSIPFSCARDSPLECNSVPNTNLAALGYIFSFGEDNKK
                     DLYILASTGVYRVVRPSRCNYSCTKENVTQDETPKTSSPSSSANHITSQNMEFVLSVS
                     LILVLVSCML"
     misc_feature    586..1914
                     /gene="LOC139842409"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; Region:
                     YliI; COG2133"
                     /db_xref="CDD:441736"
ORIGIN      
        1 atggaagctt ttcttagctt ttcccccctg ctttgtctct tcttactgat gtaccctcat
       61 ccttcttctt cattacccat gtgtaccaac ttgagggcac ctgtgattgc aaaggaacca
      121 ttggcatttt gtccgtacaa acaagagaag gtgtgttgtg actcaaccaa agactcaaaa
      181 ctgcagatgc agtttgaagc tatgaacatt tcaaatcctg attgtgcttc tgttatcaaa
      241 tcaattctct gtgctacatg cgatcagtat tcagcaaacc tattcaaggt tgaatcacag
      301 attcgttcag ttccagttct ttgcgactct cctaattcag cagattcctc tctatcgaaa
      361 caatctgaaa ccagtttttg tatgatggta tgggatacct gtcaaaacat ctccatgcaa
      421 aattccatat tcgccccttc attacaaggt ataggtggat tgccacagaa cacctcatct
      481 aagctcaccg atctctggca atcaagaacc gacttttgta cctcattcgg tagtaaacca
      541 gatgaaacga ctcagtgttt caacgggtca ccgatacagc ttaacacaac gacccaaaca
      601 ccaattccac caaatgggct gtgtcttgaa aggctaggag ataaaggata tatcaatatg
      661 gctgctcatc cagacaggtc agaccgtgca ttcttctcag acctaccagg aaaaatatgg
      721 ctagcaacta tacctactca cggttcagga gaaccgttgg ggttagatga atctaacccg
      781 tttgttgatt tgacagatca agttaaattt gatactgtat ttgggttaat ggggatagcg
      841 tttcacccga agtttgctga aaatgggcgg ttctttgctt cgtttaactg tgacaaagaa
      901 acatcttcaa cgtgttcggg aaggtgtggt tgtaactcag atgtgggttg tgacccgtct
      961 aaattagtga gttcaagcac tgcagatcac ccgtgtcagt atcataatgt tgtcgcagaa
     1021 tatactgtta atggtacatc atcagatcct gcaaaggcaa caaaagggga tcctatagaa
     1081 gtgagaagga tattcacaat gggccttccg tttacaaata atcatggtgg acagattctt
     1141 tttgggccta ctgacgggta tctatatata atgttgggag atggtggagg cagaaatggg
     1201 cctttgggat ttgctcaaaa taagaagtcg ttgcttggaa agattatgag ggtggatgta
     1261 gatactatac ctaaagaaac agatgatgat ctgaacctat ggggaaatta ttcaattcct
     1321 caagacaatc cttactctga agataaagac atgttgcctg aaatttgggc cttaggattc
     1381 agaaaccctt ggcgttgtag ctttgattct gaaaggcctt cttactttct atgtgcagat
     1441 attggtcagg atcgttatga ggaaattgat gttatcacaa agggtggcaa ctatgggtgg
     1501 agtatatatg aaggccacct tcttgttaac tcttccaaag aaaatacgtc tgtagataca
     1561 gaccttatct ttccagcaat gggatataac cataatgacg tcaacaaaaa agagggttcg
     1621 gcagcaatat cgggcgggta tttctatcgt tctactacag atccatgcat gtatggcagt
     1681 tacctgtatg cagatctgta cgccactgct ttatgggcag ccgctgaaac accaacaaac
     1741 agtgggaact ttacaaccac atcgatcccg ttcagttgtg ctcgtgattc tccattagaa
     1801 tgcaattctg taccaaacac taatttggct gctttaggtt acatattctc gtttggagaa
     1861 gataacaaga aagacctgta tattttggca agcacgggag tttacagagt agttcgccca
     1921 agtcgatgta attacagttg tactaaagaa aatgtaacac aagatgaaac tccaaaaact
     1981 tcttcacctt cttcaagtgc taatcacatc accagccaaa atatggagtt tgtgttatct
     2041 gtctctttga tattggtctt ggtaagctgt atgctgtaa
//
LOCUS       XM_071832553            1272 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 11-like (LOC139842410), mRNA.
ACCESSION   XM_071832553
VERSION     XM_071832553.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1272
                     /gene="LOC139842410"
                     /note="protein FAR1-RELATED SEQUENCE 11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842410"
     CDS             1..1272
                     /gene="LOC139842410"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 11-like"
                     /protein_id="XP_071688654.1"
                     /db_xref="GeneID:139842410"
                     /translation="MQAAVTSYAIKKMMQLFHVDFNELPLEEVTEEERSLIEEEVDRN
                     VLDLEKPFVTEEKRSLIEEEIFLVLMKKSPQTILTDQDRWMTRVIVKKMPSTKHAFCI
                     WHITSKFSSWFTSVLRSEYSNWCSDFYTLYKLDKVEEFEQQEFFFGGMTTTGRSESIN
                     AFVKRFISSRTFLTQFIRQVDLATEDVEQKQLHDTMLEKYRGSNLRSVSPLEEQAHRF
                     FTQFAFKKFQEQFGNAIQYLVPENEGNKFIVKHHKATRCHTIFWDDKVAMCTFKNFEF
                     VGILCRHILCVFIHVGCFEIPSIYLHPRWSRNDIENDGACSSHQRSRLGDSDSYKDGE
                     LVFDEIDLVQCPIKSKTKGRPQQKRKKSGKELTKQARRCGRCKCFGHNITTCKETTNI
                     QLENNSSEVSTKRKKIDSGNEELNPILSTKC"
     misc_feature    <214..>924
                     /gene="LOC139842410"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgcaggcag cagtgacttc atatgcaata aaaaagatga tgcaactatt tcacgttgac
       61 tttaatgaat taccacttga agaagtcact gaagaagaac gatcgcttat tgaagaagag
      121 gttgatagga atgttttaga tttagaaaag ccatttgtca ctgaagaaaa acgatcgctt
      181 attgaagaag agatcttttt agtacttatg aaaaagtccc cgcagacaat cttgacggat
      241 caagatagat ggatgactcg tgtaattgta aaaaaaatgc cttcaactaa acatgcattt
      301 tgcatatggc atataacttc taaatttagt agttggttta cgtcggtgtt aagaagtgag
      361 tattcaaatt ggtgttcaga cttctacacc ttatataagt tggataaagt tgaagaattt
      421 gagcaacagg aatttttctt tggcggcatg acaactaccg gaagatcaga aagtatcaat
      481 gcatttgtaa aaagatttat ttcttctcgt actttcctaa cgcagtttat tagacaagtt
      541 gatcttgcaa ccgaagacgt agagcaaaaa caattacatg ataccatgtt ggagaagtat
      601 agggggtcaa atttgcgatc agtttcacca ttagaagaac aagctcatcg cttctttact
      661 caattcgcat ttaagaaatt tcaagaacag tttggtaatg caattcaata tttggtccct
      721 gaaaatgaag gcaacaagtt tattgtcaaa catcacaaag caacacgttg tcacacgatc
      781 ttttgggatg ataaggtggc tatgtgtact ttcaaaaact ttgaatttgt tggcatactt
      841 tgtcgtcata ttttatgtgt gtttatccat gtgggttgct ttgagatccc ttctatctat
      901 ttgcatccac gatggagccg aaacgatata gaaaatgatg gtgcatgttc atcgcatcaa
      961 cgatcaagac ttggggattc agactcttat aaagatggag agcttgtatt tgatgaaatt
     1021 gatttagttc agtgccctat caaatctaaa actaaaggtc gaccacaaca aaaacgaaag
     1081 aaaagtggaa aagagttgac caaacaagca aggcgttgtg gacgatgcaa gtgttttggt
     1141 cacaatatta ccacttgcaa agaaacaaca aatattcagt tggaaaacaa ttcctcagag
     1201 gtatctacta aaagaaagaa aatcgattca ggaaatgaag aactaaatcc tattttatct
     1261 accaaatgtt aa
//
LOCUS       XM_071832554             564 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842411), mRNA.
ACCESSION   XM_071832554
VERSION     XM_071832554.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..564
                     /gene="LOC139842411"
                     /note="uncharacterized LOC139842411; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842411"
     CDS             1..564
                     /gene="LOC139842411"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688655.1"
                     /db_xref="GeneID:139842411"
                     /translation="MAPSGKYDKVYTVTSVTHLIPIKLDLAKLNYTHWSTLFANHCST
                     YNVSAFLESAVTTNDDEETKKADAAVLGWIYLTISEPHLERLLNTQPKTAYSAWEFLK
                     KIFQDNKRSKVVELTSELRALNIGDLTPEQYFRKIDSISAMLANLGTTIQDEDLVTYA
                     IHGLNGRFPHAKHIILHNNPFPSYETV"
     misc_feature    211..561
                     /gene="LOC139842411"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggcgccat ccggcaagta tgataaagtc tacaccgtca cctcggttac gcaccttata
       61 ccaattaaac tagatctcgc taaacttaat tacacgcatt ggagcactct tttcgcaaac
      121 cactgctcca cctacaacgt ttctgctttt cttgaatcag ccgtcacaac caacgatgac
      181 gaagaaacaa aaaaggctga cgcagccgtt cttgggtgga tctacctcac gatctccgag
      241 cctcacctag aacggcttct aaacacacaa ccgaaaaccg cctactcagc atgggaattc
      301 ttgaaaaaga tttttcaaga caataaacga tccaaggtag tggaactcac ctccgagtta
      361 cgtgccctca atattggcga tctcacaccc gaacaatatt ttcgaaaaat agacagtatc
      421 tccgccatgc ttgctaatct cggcaccacc atccaagatg aagaccttgt cacttacgcg
      481 atacatggac tcaatggccg gttccctcac gcaaaacaca tcatacttca taacaatccc
      541 ttcccgagtt atgagaccgt ttga
//
LOCUS       XM_071832555            1965 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842413), mRNA.
ACCESSION   XM_071832555
VERSION     XM_071832555.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1965
                     /gene="LOC139842413"
                     /note="uncharacterized LOC139842413; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842413"
     CDS             1..1965
                     /gene="LOC139842413"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688656.1"
                     /db_xref="GeneID:139842413"
                     /translation="MGDSTSVTQINKLDFSDPLYLHANDTTGTPIIAIKLKGTENYNI
                     WSRSMLLALSTKNKLGFINGTVIRNTNDEVLGSQWDRCNSVVLSWILGSVSEDLYYGQ
                     IFSTNATQVWTELKETYDKIDTSIIYNLHHQINTLKQAAFTCPAATSVKDHKKMMKLM
                     QFLMGLSDEYTAVRSNILLRDTVLDVKKAYAVISREESHKGITTEKMSKPQASAFMSQ
                     SNNSFNKTEGYSNSNNYNRNQNQTLKCKKCNKMGHTIERCFEIIGYPPSFKRRTSNNQ
                     NVNSENKSFANHSVTNKEESSVSAPASLTNDQLLKLLSLINENPTPVDANANMAGNFM
                     NCNTLFNTNFQQFFNSHINENFKNKNQGWIIDSGANQHMTVSENDLTDLIDISNLNLT
                     VGHPNGTQAKVIKVGNLKLSKNVILYDVLVVPAYCVSLLSVYKLAKDSKLTISFDENK
                     CFIQDLRTMKTVGTGSQSGGLFLFDECDVNDIGIVHQTSCAHTPQQNGIVERKHRTPS
                     SVLSGKTPYEFVFKKDPSLSHLRCFGCLCYATVLNPENKFSSRSVKCVLIGFGSVQKG
                     YKLLNLENRSVVFSRDVKFYENVFPLKQNTDSLILEKEEVNHLNFFDQIFFNNQNSQS
                     PNDEVRAATYDGDGSSRNSNPGDTRTASGS"
     misc_feature    64..201
                     /gene="LOC139842413"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    259..591
                     /gene="LOC139842413"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    <1447..1554
                     /gene="LOC139842413"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgggtgata gtacttctgt tacacagata aacaagttgg attttagtga tccactttat
       61 cttcatgcta atgatactac tggaacacca attattgcaa taaaattaaa aggaactgag
      121 aactataata tctggagtag gtcaatgttg ttggccttat caacaaagaa taaattgggt
      181 tttattaatg gtactgtaat aagaaacaca aatgatgaag tccttggatc ccaatgggat
      241 agatgcaact cagttgtgtt atcctggatt cttggatctg tttcagagga tctttactat
      301 ggacaaattt tttctactaa tgcaactcaa gtgtggactg aattaaaaga gacttatgat
      361 aaaattgaca catcaattat atataatttg catcatcaaa ttaatacttt gaaacaagct
      421 gcttttactt gtcctgctgc aacttctgtt aaagatcata aaaagatgat gaaattaatg
      481 caatttttaa tgggtttaag tgatgaatac actgctgtga gaagtaacat attgttgagg
      541 gacactgttt tagatgtaaa aaaggcttat gctgttattt caagggaaga atcccataag
      601 ggaattacca ctgaaaaaat gtcaaaacca caagcaagtg cttttatgtc tcaatcaaac
      661 aattcattca ataaaacaga aggatattct aatagtaaca actataatag aaaccagaat
      721 caaacattaa aatgcaaaaa atgcaataaa atgggtcata caattgaaag atgttttgaa
      781 atcattggtt atccaccttc ttttaagaga agaactagta ataatcaaaa tgttaattct
      841 gaaaataaat cttttgctaa tcatagtgtt actaataaag aagaatcttc tgtttctgct
      901 cctgcaagtc ttacaaatga tcagcttttg aagttactaa gtcttatcaa tgagaatcca
      961 actcctgtag atgcaaatgc taacatggca ggtaacttta tgaattgcaa tacattattt
     1021 aacacaaact ttcaacagtt ttttaacagc cacataaatg aaaatttcaa aaacaaaaac
     1081 caaggctgga taattgattc tggtgctaat caacacatga ctgtttcaga aaacgattta
     1141 actgatttaa ttgatatatc caatttaaac ttaactgtgg gacatcctaa tggtacacag
     1201 gctaaagtca ttaaagttgg aaatctgaaa ttgtctaaaa atgttatttt atatgatgtg
     1261 ttggttgtgc ctgcttattg tgttagttta ctttctgtgt ataaacttgc taaagatagc
     1321 aaactaacta taagttttga tgaaaataaa tgctttattc aggacttgag aacaatgaaa
     1381 actgtaggga ctggtagcca gtctggtgga ttgtttctgt ttgatgaatg tgatgtgaat
     1441 gatataggta ttgtgcatca aacttcttgt gcacatactc cacaacagaa tggtattgta
     1501 gaaaggaaac ataggactcc ctcaagtgtg ctctctggaa agacccctta tgaatttgtg
     1561 tttaaaaagg accctagtct ctcccacctg agatgttttg gttgtctttg ttatgctact
     1621 gttttaaatc cagaaaataa attttctagc agatctgtta aatgtgttct tattggtttt
     1681 ggaagtgttc aaaaaggtta caaattgtta aatcttgaaa atagaagtgt tgttttttca
     1741 agggatgtta agttttatga aaatgttttt cctttaaaac aaaatactga tagtttgatt
     1801 ttggaaaaag aagaagttaa tcatttaaac ttttttgatc aaatattttt taataatcaa
     1861 aactctcaaa gtcccaatga tgaagtgaga gcagcaacat atgatggtga tggcagtagt
     1921 agaaatagta atcctggtga taccagaact gctagtggta gttaa
//
LOCUS       XM_071832556            1217 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein GAMETE CELL
            DEFECTIVE 1, mitochondrial-like (LOC139842414), mRNA.
ACCESSION   XM_071832556
VERSION     XM_071832556.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1217
                     /gene="LOC139842414"
                     /note="protein GAMETE CELL DEFECTIVE 1,
                     mitochondrial-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842414"
     CDS             1..900
                     /gene="LOC139842414"
                     /codon_start=1
                     /product="protein GAMETE CELL DEFECTIVE 1,
                     mitochondrial-like"
                     /protein_id="XP_071688657.1"
                     /db_xref="GeneID:139842414"
                     /translation="MVQLPLYRNCHNLSSIIRRQAIKSSTLTACVQRLSTKATGGGDE
                     WNDAWETAWLPEYLSGKNRAPWEADVNFSIFDTPEVLDADTKSFVEEMDDNWEQRRKK
                     GGGEREGEDEKGLKRLENMKRDYRVQKQWVHAGLWVKEIEMMEEAKLSESATGSGHYN
                     LDRFLNSASEIFKSGSTDLNKSKVKDSWDLNNKPDGWETTSKGQDGNIWEMSQREEDI
                     LVQEYERRIAFSKHQIASFIKQHIFSRRRPIDGWKYMIEELGPYARRGNGSVSRLPSL
                     ADSAIQPFKEDKIPSATTTKKGR"
ORIGIN      
        1 atggttcaac tccccttgta ccgcaattgt cacaatctat catctattat aaggcgtcaa
       61 gcaattaaaa gctcaacctt gactgcttgt gtacaaaggc tgtcaaccaa ggcgactggt
      121 ggtggagatg aatggaatga tgcttgggaa acagcatggc tccctgaata tttatcaggg
      181 aaaaatcgag caccatggga agcagatgtc aatttttcta tcttcgatac accggaggtt
      241 ttggatgcgg atacaaagtc atttgttgaa gaaatggatg ataattggga gcagaggagg
      301 aaaaagggtg ggggtgaaag agagggagaa gatgagaaag gattgaaacg tttggagaat
      361 atgaagaggg attatagggt tcagaaacaa tgggttcatg cgggtttatg ggttaaagaa
      421 attgagatga tggaagaggc taagttgagt gagtccgcaa ccggttcggg tcattacaat
      481 ctcgacagat ttcttaacag tgcttctgag atattcaagt ctggaagcac tgatttgaat
      541 aagtcaaaag ttaaagattc ttgggattta aataataagc cggatggatg ggaaacaaca
      601 tccaagggtc aagatggcaa catttgggaa atgtctcaaa gagaagaaga cattcttgtt
      661 caagagtatg aacgtcggat tgctttcagc aaacaccaga tagctagctt tattaagcaa
      721 catatattta gtcgaagaag accaatcgat ggatggaagt acatgattga agaattagga
      781 ccatatgcaa gaagaggtaa cggtagtgtt tcaagactac ctagtcttgc tgactcagcc
      841 atccaaccat ttaaagagga caagatacca agtgctacaa caaccaaaaa aggaagatag
      901 ataatatttg ttatttacat cctcgtattg gattcctatc aaaatgctac agaactccag
      961 ctatcaaaat aataaatttt attaggtgga aagagcaaag cggttattct aaatatgtct
     1021 aaagactcat gacacccatc tttaaagcat cccctttttt ccagttcggt atgtaaatca
     1081 tcatttgatc tgtattaatg gcagactatt tttatttatt tttagtcttg atcgacctta
     1141 tactatattt tagctttatc tctagcttaa caaatcgtcc tcgagttttt tacaacgata
     1201 actttcacat catactt
//
LOCUS       XM_071832557             345 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00820-like (LOC139842415), mRNA.
ACCESSION   XM_071832557
VERSION     XM_071832557.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..345
                     /gene="LOC139842415"
                     /note="uncharacterized mitochondrial protein
                     AtMg00820-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842415"
     CDS             1..345
                     /gene="LOC139842415"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00820-like"
                     /protein_id="XP_071688658.1"
                     /db_xref="GeneID:139842415"
                     /translation="MVQLEEDEPRNINEALTCTAKDEWFKAMEEEMESMRSNNVWELV
                     DLPKGRKARGSKWILKIKCKADGSIERYKAQIVAKGYNQQEGIDYEEMFSHVVRLTSI
                     RLIYSNSGKYEP"
     misc_feature    112..>339
                     /gene="LOC139842415"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atggttcaac tagaagagga tgaacccaga aatataaatg aagctctcac ttgtactgca
       61 aaggatgaat ggtttaaagc aatggaagaa gagatggagt ctatgagatc caacaatgtt
      121 tgggaattgg ttgatcttcc aaaaggaaga aaagccagag ggagtaagtg gattctcaaa
      181 ataaagtgta aagctgatgg tagtattgaa agatacaaag ctcaaattgt ggcaaaaggc
      241 tacaatcaac aggaagggat tgactacgag gaaatgtttt cacatgttgt aagactcaca
      301 tcaattcgtt tgatttatag caatagtggc aagtatgaac cttga
//
LOCUS       XM_071832558            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842416), mRNA.
ACCESSION   XM_071832558
VERSION     XM_071832558.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139842416"
                     /note="uncharacterized LOC139842416; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842416"
     CDS             1..1089
                     /gene="LOC139842416"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688659.1"
                     /db_xref="GeneID:139842416"
                     /translation="MGDENAITLISKTDFGDPLYLHASDTTNTPLISIKLKGTENYNV
                     WSRAMLLALSTKNKVGFENGTYLKNNDNDVLAAQWDRCNYVVLSWLLNSISEDLYSGQ
                     ISSSTASVVWTELKETYDKVDGSIIFNLHHKISYVKQSGSSLSEYYHKLNTLWKQYDE
                     MVKLPACVCAAAPEFQQHNKVLKLMQFLMGLDDVYMSIRSNLLLRDPLPDVKSAFAIL
                     SREESHRGVFGVGTSKSQNSAFVAQTNNNSWSNRNNNTGSSGRGRGFNRGPNPNLKCT
                     KCNKIGHTIDRCFEIVGYPNNYKKPFNGNANKSNTYVSSCAASDSLSGSTTSSSNIGS
                     TNSSNSVPMSLSNEQMMKLLSMLNDKGP"
     misc_feature    64..204
                     /gene="LOC139842416"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    259..675
                     /gene="LOC139842416"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgggcgatg aaaatgctat tactttaatt agcaaaactg actttggtga tcctctttac
       61 ctgcatgcta gtgatacaac caatacacct ttaatatcca ttaaactgaa aggaactgaa
      121 aattataatg tctggagtag agctatgtta ttagcattat ctactaaaaa caaagtaggg
      181 tttgaaaatg gaacttattt gaaaaacaac gataatgatg ttcttgctgc tcaatgggat
      241 aggtgtaatt atgttgtgtt gtcctggttg ttaaattcta tttctgagga tttatattct
      301 ggacagattt cttcttctac tgcttctgtt gtttggactg aattaaaaga aacctatgat
      361 aaagttgatg gatctataat tttcaatttg catcataaaa ttagctatgt gaaacaaagt
      421 ggtagtagct tatctgaata ttatcataaa cttaacactt tatggaaaca atatgatgaa
      481 atggttaaat tacctgcttg tgtttgtgct gctgctcctg agtttcaaca acataacaaa
      541 gtcttaaaat tgatgcaatt tcttatggga ttggatgatg tttacatgtc tattagaagt
      601 aatttgttac ttagagaccc cttacctgat gttaagtctg catttgctat tttatccaga
      661 gaagaatcac acaggggggt ttttggggtt ggaacatcta agtctcaaaa ctctgctttt
      721 gttgctcaaa ctaataataa ttcttggtca aacagaaata ataatactgg tagttctgga
      781 agaggaagag gttttaatag aggtcctaat cctaatctta agtgtactaa gtgcaataaa
      841 attggacaca ccattgatag gtgctttgaa attgttggat atcctaataa ttataagaaa
      901 ccttttaatg gaaatgctaa taaatcaaat acgtatgtgt ctagctgtgc tgcatctgat
      961 tctttgtctg gttcaactac atcctcttct aatattggtt ctactaactc ttctaattct
     1021 gttcctatgt ccttgagtaa tgaacaaatg atgaagcttt taagcatgct taatgacaag
     1081 ggcccttaa
//
LOCUS       XM_071832559            1890 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable alkaline/neutral
            invertase F (LOC139842417), mRNA.
ACCESSION   XM_071832559
VERSION     XM_071832559.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1890
                     /gene="LOC139842417"
                     /note="probable alkaline/neutral invertase F; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 59 Proteins"
                     /db_xref="GeneID:139842417"
     CDS             1..1890
                     /gene="LOC139842417"
                     /codon_start=1
                     /product="probable alkaline/neutral invertase F"
                     /protein_id="XP_071688660.1"
                     /db_xref="GeneID:139842417"
                     /translation="MSLSSQIDASFSSDDLQFQMDDDNNHVIIEPSSIAENEGESEND
                     TTDVIWRNIENNSDRRGVLKRATATATFRKYATEGGEEREVVDVVLPKIKTTTVAEHH
                     DSSAPSSNKQSTASDHSGGRASFADKSILKPSPSVGTCLSQFLTDQAGNGIEIGNCSS
                     AGMMDEAWERLTSSYVYYHNKPVGTLAADDPSTEALNYNQVFVRDFVPTALASLMRVP
                     PKPDIVKNFLLQTLRLQGYKKTIDNFTLGQGVMPASFKVMKHSVKEKDVLMADFGGSA
                     IGRVAPVDSGFWWIILLKSYTKSTGDHTLSERPEVQKGMKLILNLCLSDGFDTFPTLL
                     CADGCSMIDRRMGIYGYPIEIQALFFFALRCAKHMLKEDTETNKLIERIEKRITALSY
                     HIRNYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPESIPEWVFDFMPLKGGYFIGNV
                     SPARMDFRWFLIGNCIAILTSLATVPQATAIMDLIEERWEDLIGEMPLKIAYPALEGY
                     EWKIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKAGRPQIAKRAIELAEQRLSKDG
                     WPEYYDGKKGRYIGKQARKYQTWSISGYLVAKLMIENPSNITMISLDEDKKIEKTKLK
                     RAASI"
     misc_feature    508..1806
                     /gene="LOC139842417"
                     /note="Alkaline and neutral invertase; Region:
                     Glyco_hydro_100; pfam12899"
                     /db_xref="CDD:432863"
ORIGIN      
        1 atgagtttga gcagtcaaat cgatgcttca ttctcgagcg atgacttgca atttcagatg
       61 gacgacgata ataatcacgt gatcattgaa ccgtcatcaa ttgctgaaaa cgaaggtgaa
      121 tcggagaacg atacgactga tgtgatttgg cgaaatatcg agaacaactc cgatcgtcga
      181 ggagtattga agagagctac tgctactgct acatttcgga aatacgcaac tgaaggaggt
      241 gaagaacgag aagttgttga tgttgttctt ccgaagatta agactactac tgttgctgag
      301 catcatgatt catcagcgcc gtcatctaat aagcaatcta ctgcatcaga tcattcagga
      361 ggacgtgctt cttttgctga caaatcgatt ttgaagccat cgcctagtgt aggtacctgt
      421 ctcagtcaat ttctcactga tcaagcagga aatggaatag agatcggtaa ttgttcatct
      481 gctggtatga tggatgaagc atgggaacgt ttgactagct cctacgttta ttaccacaat
      541 aagccagtcg gaaccctagc tgctgatgat cctagtacag aggctttaaa ctacaatcag
      601 gtgtttgtca gagacttcgt gcctactgcc ttagcctccc taatgagagt tccaccgaag
      661 ccagatattg tgaaaaactt cttactgcag actcttcgtc tccaaggcta taaaaagact
      721 attgataatt ttactcttgg acaaggtgtc atgcctgcca gcttcaaggt catgaaacac
      781 tcggtcaagg aaaaggatgt attgatggct gactttggtg gcagtgcaat tggaagagtt
      841 gcaccagttg attcaggttt ctggtggatc atactgttga agtcatacac caagtctaca
      901 ggagatcata ctttgtcaga gaggcctgag gtgcagaaag gaatgaagtt gatactcaac
      961 ctttgcctat ctgatggttt tgacactttc ccaacactac tgtgtgctga tgggtgcagc
     1021 atgattgaca ggaggatggg aatatatggg tatccgattg agatccaggc tctgttcttt
     1081 tttgcactga ggtgtgcaaa acacatgctt aaagaggata ctgaaactaa taagctgatt
     1141 gagagaattg aaaaaaggat tacagctcta agctaccaca tccgaaacta ctattggcta
     1201 gatttcaccc agttgaacaa catctatcgt tacaaaacag aggagtattc ccacacagct
     1261 gtaaacaagt tcaatgtcat tcctgagtct attccagaat gggtgtttga tttcatgccc
     1321 ttgaagggag ggtacttcat tggaaatgtg agcccagctc gcatggattt caggtggttc
     1381 ttaattggca actgcattgc catattgact tccttggcca ctgtgccaca agcaacagcc
     1441 attatggact tgattgagga gcgatgggaa gatcttattg gcgagatgcc tttaaagatt
     1501 gcttacccag ctttggaggg atatgagtgg aagattgtca ctggatgtga tcctaagaac
     1561 acacgttgga gttatcacaa tggtggctct tggccagttc ttttatggct gctaacagca
     1621 gcttgcatca aggcaggaag gcctcaaatt gctaagagag ctatagaact ggcggagcag
     1681 cggctttcaa aagatggatg gccagagtac tatgatggta agaagggacg ttatattggg
     1741 aagcaagcaa gaaagtatca gacatggtcc atctctggtt acctggttgc aaagctcatg
     1801 atagagaacc cgtctaacat caccatgatt tctctagacg aagataagaa gattgaaaag
     1861 acgaagctta aacgggcagc gtctatataa
//
LOCUS       XM_071832560            1425 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842419), mRNA.
ACCESSION   XM_071832560
VERSION     XM_071832560.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1425
                     /gene="LOC139842419"
                     /note="uncharacterized LOC139842419; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842419"
     CDS             1..1425
                     /gene="LOC139842419"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688661.1"
                     /db_xref="GeneID:139842419"
                     /translation="MESVFRLSNCGEADKVKYATGNLSGGALTWWTAYAGTVGWTAAL
                     AIPWETLKTMLASKYCPRNQVQKFEVEFWELRMKNLEFEEYNNRFLELAALCPSIVTP
                     ESKKIEKYIIDLPPQIQGNVIAAGKESIEATMLMTQNLVMAARRNAKEKQTEVKTTDN
                     KRKFEPTQGASQNSNKKIGDITKNGYGGTKPQCKRCNKHHHGLCTAKCGRCKRIGHST
                     ENCRVTLPATNTTPTVPTCFGCGEKGHYRNNCPKNKTATTDTAKGRAFVMTVEEARND
                     DDIITGTFLVNNCYASVLFDTGADRSYVSIELCTLFDEKPQTLDTKCLVEMANGKFVK
                     VDRIYKECNLTLANKTFKVDLMPVELGSFDVVLGMDWLSPMKVGILCFDKTINIPLET
                     GEILVIQGDKGGSKLNLISCIKTRKYLMKGCQAILAHIKEVKPDERRIEDVPVVKEFP
                     KVFPDELPVDSNGIHVDPAKITAI"
     misc_feature    49..333
                     /gene="LOC139842419"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <517..759
                     /gene="LOC139842419"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    781..1158
                     /gene="LOC139842419"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(886..888,892..894,898..900,973..981,1096..1098)
                     /gene="LOC139842419"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    886..894
                     /gene="LOC139842419"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    886..888
                     /gene="LOC139842419"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(973..984,994..1005)
                     /gene="LOC139842419"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggaatctg tgtttcgtct gagtaattgc ggtgaagctg acaaggtcaa gtatgctact
       61 ggaaatctat ctggtggagc tctaacttgg tggactgctt atgctggtac agttggatgg
      121 actgctgccc tagccatacc ctgggaaaca ttaaaaacta tgctggctag caagtattgt
      181 cccaggaatc aagttcagaa atttgaagtc gaattttggg agttgagaat gaaaaatctt
      241 gaatttgagg aatacaacaa ccgatttctg gagctagctg ctctatgccc tagtattgtt
      301 actcctgaga gcaagaagat tgaaaagtat atcatcgatc ttcctcctca aatccagggg
      361 aatgttatag ctgctggtaa agaatctatt gaggctacga tgttaatgac ccaaaatctg
      421 gttatggctg caaggagaaa tgccaaggaa aaacaaaccg aagtgaagac tactgataac
      481 aaaagaaagt ttgaacctac tcaaggtgca agtcagaatt caaacaagaa gattggtgat
      541 attacaaaaa atggttatgg tggaacaaag ccgcaatgta aacgctgtaa taaacatcat
      601 catgggttgt gcactgctaa gtgcggaagg tgtaagagga ttggtcactc gaccgagaat
      661 tgtagagtta ctttgcctgc tacaaataca actccaaccg tgcctacttg tttcggttgt
      721 ggggaaaagg ggcattacag gaacaactgc cctaagaaca agactgcaac aactgatact
      781 gctaagggaa gagcttttgt catgactgtt gaagaagcta ggaacgacga tgacatcatc
      841 actggtacat ttcttgtcaa caactgctat gcttctgttt tattcgatac tggtgctgat
      901 agaagctatg tgtctattga attatgtacc ttatttgacg agaaacctca aaccttagac
      961 actaagtgtc tcgtagaaat ggccaacggg aaatttgtaa aagttgaccg aatctacaag
     1021 gaatgtaatc tgactctagc caataaaacc ttcaaggttg acttaatgcc tgttgaacta
     1081 ggaagctttg atgtagtctt agggatggac tggttatccc cgatgaaagt gggtatccta
     1141 tgttttgata agacaattaa tattcctctc gaaactggtg aaattcttgt catccaagga
     1201 gacaagggtg gttccaaact taatcttatc tcatgcatca aaacccgaaa gtaccttatg
     1261 aaaggatgtc aagccatttt ggctcacata aaagaagtca agccagatga acggcgtatt
     1321 gaagacgttc ctgttgttaa agaatttcct aaagtttttc ctgacgaact ccctgttgac
     1381 agcaatggga tacatgttga ccccgcaaag atcacggcta tttag
//
LOCUS       XM_071832561             606 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842420), mRNA.
ACCESSION   XM_071832561
VERSION     XM_071832561.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..606
                     /gene="LOC139842420"
                     /note="uncharacterized LOC139842420; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842420"
     CDS             1..606
                     /gene="LOC139842420"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688662.1"
                     /db_xref="GeneID:139842420"
                     /translation="MEKKADNNLLNDTERLEWLECRKKWLEKEKVKTCMMKQKSRIKW
                     ILEGDENTKFFHSIINRNNIKNNLRGLYINGIWQDSPDAIKTEAFNHFSRIFKELEVE
                     RPYMEELIYPCLSADEASALELPFSASEIKEAVFDCGGNKAPDPDGFNMKFYKNYWEK
                     IKNELIEAIGWFWNKGEISKGSNSSFNTLISKKLDIFGLSV"
ORIGIN      
        1 atggagaaga aggcggataa taatctcctt aatgacaccg aaaggctaga gtggttggaa
       61 tgtaggaaaa agtggttgga aaaggaaaaa gtgaagactt gtatgatgaa acaaaagtcg
      121 cgcatcaaat ggattttgga aggagatgaa aatacaaagt tctttcactc aattatcaat
      181 aggaataata ttaagaacaa cttgagggga ttgtacataa atggcatttg gcaggactct
      241 cctgatgcca ttaaaaccga agccttcaat cacttttctc gcattttcaa agagctagag
      301 gtagaaagac cttacatgga agagttaata tacccatgct tatctgctga tgaggcttcg
      361 gctctggaac tcccatttag tgcgagtgag atcaaagagg cggtttttga ttgcgggggc
      421 aataaagctc ccgatcctga cgggtttaac atgaagttct acaaaaatta ttgggaaaaa
      481 attaaaaatg aactcattga ggcaattggg tggttctgga ataaaggcga aatctccaaa
      541 gggtccaatt cctcctttaa cactttaatc tcaaaaaaac tcgacatttt cggcctatca
      601 gtttaa
//
LOCUS       XM_071832563             984 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842421), mRNA.
ACCESSION   XM_071832563
VERSION     XM_071832563.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..984
                     /gene="LOC139842421"
                     /note="uncharacterized LOC139842421; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842421"
     CDS             1..984
                     /gene="LOC139842421"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688664.1"
                     /db_xref="GeneID:139842421"
                     /translation="MEQSAFIKGRFILDGALIVNESIDFLKGAKEKGLLFKVDFEKAG
                     QQLETTVLGVRWLTGIKLKDLYPRLYRLEPEPQARICDRVVTEGSSYKLVSNWTRQPG
                     GRTIDELEQPNSLVAEYKFNNSGCDMCFWNILHNGTFTVQSLSLHIDNHLIEEDPNIE
                     ETLRNNLVPKKLEFFVWRACKKRFPILLELDKRGIDLHSVRCPICDDDLESVEHSLIF
                     CRLSMDIWDRVFAWWGFGNMTILSLGEILRGKSPSPSSTIGTKIWQAVEWVCSYLIWK
                     NRNGKVFRGKSWNAPVALHEIQLKSFDWISKRLKNKKIDWLTWLHNPSVYL"
     misc_feature    <4..>129
                     /gene="LOC139842421"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    415..666
                     /gene="LOC139842421"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggagcaaa gtgctttcat taaagggagg tttattctcg atggtgcgtt aattgttaac
       61 gaaagcattg attttcttaa aggtgcgaag gaaaaaggct tactctttaa agttgacttt
      121 gaaaaggctg gacagcaact cgaaactact gttttgggag tcaggtggct aacaggtata
      181 aagcttaagg atttataccc gagactttat cggcttgaac cggaaccgca agcgagaatc
      241 tgtgatcgtg ttgtaacaga gggatcgagc tataaattgg tcagcaactg gacgaggcaa
      301 cctggtggta gaaccattga cgaactcgaa caacctaaca gccttgtagc ggagtacaaa
      361 ttcaacaact cgggatgcga catgtgtttc tggaatatct tacataacgg cacctttact
      421 gtacaaagct tatcccttca cattgataac catttaattg aagaagatcc gaatatagaa
      481 gaaactttaa gaaataatct agttcctaaa aaactagaat ttttcgtttg gcgggcatgt
      541 aaaaaaagat ttcccatttt gctcgagttg gacaagcggg ggatagattt gcatagtgta
      601 aggtgtccga tatgtgatga tgatctcgaa tctgtggaac attccttgat cttctgtaga
      661 ctatcgatgg atatttggga ccgggtattc gcatggtggg gttttgggaa tatgacaatc
      721 cttagccttg gtgagatatt acgtggtaaa agcccttctc catcgtccac aattggaaca
      781 aaaatttggc aggcggttga atgggtttgt tcttacttga tttggaaaaa caggaatgga
      841 aaagtgtttc gaggaaaatc gtggaacgct ccggtcgcgc tacatgaaat tcaactcaaa
      901 tcctttgatt ggatttctaa aagattgaag aataagaaga tcgattggtt aacttggcta
      961 cataatccta gtgtatatct ttaa
//
LOCUS       XM_071832564            1080 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842422), mRNA.
ACCESSION   XM_071832564
VERSION     XM_071832564.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1080
                     /gene="LOC139842422"
                     /note="uncharacterized LOC139842422; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842422"
     CDS             1..1080
                     /gene="LOC139842422"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688665.1"
                     /db_xref="GeneID:139842422"
                     /translation="MSISEYTGLFNDKSRFCPEYTSNPTLLRDHYHRHMKLEISEFID
                     PVLYDTVSKMMNIALKRERELQRKSTYIAEKRKTEQVSSSSYCTPLKKTRYDERPPQQ
                     QQMQYRPSQPQRYQQPQRYQPPQQQQPFHQSKGEIGNAPICNRCGKQHLGMCATQRSC
                     FRCGSTDHLGRDCSSPFQLCFYCYGNDHLKADCSKLKEDMKRAEQRKDAGRRAVIGNF
                     KPKSRSFQLTTEEAKKSHDVVTGTFIVNNMPAHILFDSGATKSLVSLSFCERFNLPLC
                     KLDYPLEVEIADSKLVIVNDIYTGCIIEINGEQFKIDLIPMKMEEFHVVIGMDWLGDH
                     KGTIKCHKKIVRLSAPSGKKDDYLW"
     misc_feature    <469..>591
                     /gene="LOC139842422"
                     /note="Arginine methyltransferase-interacting protein,
                     contains RING Zn-finger [Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; Region: AIR1; COG5082"
                     /db_xref="CDD:227414"
     misc_feature    667..1059
                     /gene="LOC139842422"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(763..765,769..771,775..777,850..858,973..975)
                     /gene="LOC139842422"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    763..771
                     /gene="LOC139842422"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    763..765
                     /gene="LOC139842422"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(850..861,871..882)
                     /gene="LOC139842422"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgtctattt ctgaatatac gggtctattt aatgacaaat ctcgtttttg tcccgagtac
       61 acttctaatc caacattgtt acgtgatcat taccaccgcc acatgaaact cgaaattagc
      121 gagtttattg atcccgttct ctatgatacc gtgtctaaaa tgatgaatat agctttaaaa
      181 cgtgaaagag aacttcaaag gaaatccact tatattgctg agaagaggaa gactgagcag
      241 gtatcatctt catcttattg tactccatta aagaaaacaa gatacgatga aaggccaccc
      301 cagcaacaac aaatgcagta taggccttca caaccgcaaa ggtatcaaca accgcaacga
      361 taccaaccac cacaacagca acaaccattt catcagtcta agggcgaaat aggaaatgct
      421 cctatctgta accggtgtgg caaacaacat ttgggtatgt gtgcgacaca gaggtcttgt
      481 tttcgttgtg gtagtactga tcatttgggc agagattgtt cgagtccttt tcaattatgt
      541 ttttattgtt atggaaatga ccatctaaag gcagactgct caaagttgaa ggaagatatg
      601 aagagagctg aacagagaaa agatgcaggg agaagagctg taatcgggaa tttcaaaccc
      661 aaatctcgat cttttcagtt gactacagag gaggcaaaaa aatctcatga cgttgtgaca
      721 ggtaccttta ttgttaataa tatgcctgca cacattctct ttgactccgg agctactaaa
      781 tccttagtgt cactctcttt ttgtgaacgt tttaatttac ctttgtgcaa gcttgattat
      841 cctttagaag ttgaaatagc cgatagcaag ttagttattg ttaacgacat atacacgggt
      901 tgtattattg aaattaacgg tgaacagttt aaaatcgatc tgattcccat gaaaatggaa
      961 gagtttcatg ttgttatcgg tatggattgg ctgggtgatc ataaaggaac tatcaaatgt
     1021 cataagaaga ttgttcgttt aagtgctcct agtggaaaaa aagatgatta tttatggtga
//
LOCUS       XM_071832565             537 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pathogenesis-related protein
            PRMS-like (LOC139842423), mRNA.
ACCESSION   XM_071832565
VERSION     XM_071832565.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..537
                     /gene="LOC139842423"
                     /note="pathogenesis-related protein PRMS-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 42 Proteins"
                     /db_xref="GeneID:139842423"
     CDS             1..537
                     /gene="LOC139842423"
                     /codon_start=1
                     /product="pathogenesis-related protein PRMS-like"
                     /protein_id="XP_071688666.1"
                     /db_xref="GeneID:139842423"
                     /translation="MKQENIICILSTFLVILLVVYETNSTPQEEKEFIDTHNKARLKE
                     GLPPFTYDQKLADFARKYASSRARDCALQHSDGPYGENLFWGNAAKSLKWTPKDAVTA
                     WVKEQKYYNRKTNTCKPGKKCGHYTQIMWRDTKKVGCALTNCRGKSTYVVCEYDPPGN
                     YEGLSPFDKHDPYIYSQA"
     misc_feature    91..501
                     /gene="LOC139842423"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain of
                     pathogenesis-related protein 1 (PR-1) family proteins;
                     Region: CAP_PR-1; cd05381"
                     /db_xref="CDD:349400"
ORIGIN      
        1 atgaaacaag aaaacataat ctgcattctc tccacattcc ttgttatttt gttagtagtc
       61 tatgaaacaa actccacccc gcaagaggaa aaggaattta tcgacacaca taataaggca
      121 cgcctcaaag aaggtttacc accatttacc tatgatcaaa aactcgctga ttttgcgcgt
      181 aaatatgcat catcgcgtgc tcgtgattgc gccttacaac attcagatgg accatatggc
      241 gaaaacctct tttggggtaa tgctgcaaag tcgctcaaat ggacccctaa agatgcagtt
      301 actgcgtggg tgaaagaaca aaagtattat aacaggaaaa ctaatacatg taagccgggc
      361 aaaaaatgtg gccattacac acaaatcatg tggcgagaca ccaaaaaggt gggttgcgcg
      421 ttaacaaatt gtaggggcaa aagcacctat gttgtatgtg agtatgatcc tcctgggaat
      481 tatgaaggac tttccccttt tgataaacat gatccataca tttatagcca agcttga
//
LOCUS       XM_071832566             702 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842426), mRNA.
ACCESSION   XM_071832566
VERSION     XM_071832566.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..702
                     /gene="LOC139842426"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139842426"
     CDS             1..702
                     /gene="LOC139842426"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688667.1"
                     /db_xref="GeneID:139842426"
                     /translation="MPNQAKAVSQLEYSQVIGCLMYAMTCTRPDITFAVGKLSRYTSN
                     PSTHHWQATRRVLKYLKKTMDYSLSYNGFPSVIEGYSDASWITNIEDHYSTSGWVFLL
                     GGGAISWASKKQTCITNSTMESEFVALAAAGKEAEWLRNLIHEIPLWPKPIVPMSIHC
                     DSAATLAKAYSQMYNGKSRHLGVRHSMIRELIMNGVISIEFVRSQQNLADHLTKGLAR
                     DLVNKSAKGMGLKST"
     misc_feature    232..657
                     /gene="LOC139842426"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(244..255,358..366,373..375,481..483,559..561,
                     640..642)
                     /gene="LOC139842426"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcctaacc aagctaaagc tgtatcacaa cttgagtatt ctcaggtgat tggctgtttg
       61 atgtatgcca tgacatgtac aaggccggat attacttttg ctgttggaaa actgagtaga
      121 tatactagta atcctagtac tcatcactgg caagcaacta gacgggtatt gaagtattta
      181 aagaaaacta tggactatag tttatcttac aatggatttc cttctgtaat agaaggatat
      241 tctgatgcga gttggataac caatattgaa gatcattatt caacaagtgg ttgggtgttc
      301 ttgcttgggg gaggtgccat ttcatgggct tctaagaagc agacatgtat taccaactca
      361 acaatggaat ctgagtttgt tgctttagct gctgctggta aagaggcaga atggcttaga
      421 aacttgatcc atgagatacc attgtggcct aaacctatag tacctatgtc tatccactgt
      481 gatagtgctg ctacattagc aaaggcttat agtcagatgt acaatggaaa gtctagacac
      541 ttgggtgtca gacatagcat gattcgtgaa ctcatcatga atggggtgat ttctatagag
      601 tttgtgaggt cacaacagaa cttagctgat cacttgacga agggattagc tagagacttg
      661 gttaataagt ctgctaaagg gatgggatta aagtccacct aa
//
LOCUS       XM_071832567            2721 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139842428), mRNA.
ACCESSION   XM_071832567
VERSION     XM_071832567.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2721
                     /gene="LOC139842428"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139842428"
     CDS             1..2481
                     /gene="LOC139842428"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like"
                     /protein_id="XP_071688668.1"
                     /db_xref="GeneID:139842428"
                     /translation="MENAQRINQILYPLIDTSEDIIEIRDEIVHQTGRRSIEDKVYVA
                     VGTDLKDCRSTLLWALQNSGGRQICILHVHQPAQSIPSARQVTAYQEMDREDMHQLLD
                     KYKQICQDTGVRAEVQYIEMEYIEKGIVDFILQHNVRRLVMGAATADTQNSRMVELRS
                     KKAVYVCLHAAASCQIQFICKGEVIFTRKGWLSGVDELNGLIPLNTKTDSRQSFLRSA
                     SVSTNTDSFFFFFSTISQGDYPLYGQPGVIAGEPPGRPLSTPPPPTWLTNTDSSQTSP
                     SSTSVSEGLQVLLHPDNPTQDDGTMSRIDEDIQNVSPFSVIEKGINELYDQLVQAMED
                     LDKSKRDAFEESIKCRKAQKDAIEAKRMASISENLYVEELGKRREVEEKLEKTMEELN
                     MALEQKSILESQNADFVDIVHELEQAVFSNDDQLQIYKKERDELKVKCDDAVRLVEEL
                     TEKHEEDASSSNVFNFYSEFESTEVKNAIGHFDPSLKIGEGSFESTYKGLLRHTEVVV
                     KVFYDQNFQVSSKYQQEVNLLSKLRHPNVVTLIGACPDDRMIIYEYLSGGNLEDRLDC
                     KDNTPSLSWQNRIRIATELCSVLIFLHSCGVVHGNLKPKNILLDKNLVTKLSSFGIHH
                     QLSLTEVLSNNNASLYMDPACFFTGEFTVNSDAYSFGVILLRLLTGKPTLGLTYEVRL
                     ALNNDTLKNILDSTAGDWPFVLAQRLAVLAMSCCDFVTTNRPDFETGIWRVIEPIRAS
                     CGLCSFSLGSEGRRDIPHYFVCPIFQDTMEDPVVAADGFTYEAEAIKGWLDSGHNTSP
                     MTNLELANTNLVPNHALRSAIQEWLQQP"
     misc_feature    118..546
                     /gene="LOC139842428"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    <943..>1368
                     /gene="LOC139842428"
                     /note="Mitochondrial inner membrane protein; Region:
                     Mitofilin; pfam09731"
                     /db_xref="CDD:430783"
     misc_feature    1462..2184
                     /gene="LOC139842428"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1462..1473,1480..1482,1486..1488,1519..1521,
                     1525..1527,1612..1614,1654..1665,1801..1803,1813..1818,
                     1822..1824,1852..1857)
                     /gene="LOC139842428"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2269..2436
                     /gene="LOC139842428"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
ORIGIN      
        1 atggagaatg cacaaaggat taatcagata ctgtatccac ttattgacac ctcagaagat
       61 atcatcgaaa ttagggatga aattgttcat caaaccggtc gtcgtagtat tgaggacaaa
      121 gtgtacgtgg ccgttgggac ggacttgaaa gactgccggt caactctgct gtgggcccta
      181 cagaattcag gaggtagaca gatatgtata cttcatgtcc accaacctgc acaatcaata
      241 ccttctgcac gtcaagtcac agcataccaa gaaatggata gggaagatat gcaccagctt
      301 ctcgacaaat ataaacagat atgtcaagat acaggggtgc gtgcggaggt gcaatatatt
      361 gaaatggaat atattgagaa aggtattgtt gacttcatac ttcaacacaa tgtcagaagg
      421 cttgtcatgg gagcagcaac cgcagacaca caaaattcaa gaatggtgga attaagatcc
      481 aagaaagccg tatatgtgtg tttacatgca gctgcttcat gtcagattca atttatttgc
      541 aaaggagaag ttatttttac taggaaaggt tggttgagtg gagtcgatga actgaatggt
      601 ctaattcctt taaatacaaa aactgattct agacagagtt ttctgaggtc agcatcagtt
      661 agtacaaaca ctgattcttt tttttttttt ttttcgacta tatcccaggg cgactacccg
      721 ctttacgggc agcccggagt catcgcgggt gaacctccgg gtaggccctt gtccactcca
      781 ccaccaccaa cttggttaac aaacactgat tctagtcaga cttctccaag ttcaacatct
      841 gtcagtgaag gactgcaagt tttattacat cccgacaacc caactcaaga cgatggtaca
      901 atgtccagaa tcgatgagga cattcaaaat gtttcacctt tcagtgtcat agaaaaaggt
      961 ataaatgaac tttatgacca gcttgtacaa gctatggaag atttagataa atccaaacga
     1021 gatgcttttg aggaatctat caagtgtcgg aaagcacaaa aagatgccat cgaggctaag
     1081 cgcatggcta gcatatccga aaacttgtat gtggaagaac taggaaaaag gcgagaggtt
     1141 gaagagaaac tagaaaaaac catggaagaa ctcaacatgg cacttgaaca gaaatcgatt
     1201 ctcgaaagtc aaaatgcaga ttttgttgat attgtacacg aacttgaaca ggcagtgttc
     1261 tctaacgacg atcagcttca gatttataaa aaagaacgtg acgaattgaa ggtaaaatgt
     1321 gacgatgcag ttagattagt agaggaacta acagagaaac atgaagagga cgcgtcaagc
     1381 tcaaatgttt ttaactttta ctctgagttt gagtcaacag aagtcaaaaa cgccatcggt
     1441 cactttgacc cgtcacttaa gataggagaa gggagttttg aaagtacata caaaggatta
     1501 cttcggcata ctgaagtggt cgtaaaggtg ttttacgatc aaaactttca agtctcctcg
     1561 aaatatcagc aggaggtgaa tcttttgagc aaactgaggc acccaaatgt tgtaacccta
     1621 atcggtgcct gcccagatga tcggatgata atttacgagt atctttctgg aggtaacctt
     1681 gaagatcggc tcgattgcaa agacaatacc ccctcgttat catggcaaaa tagaatccgc
     1741 attgctaccg aattatgttc tgttcttatt tttctccatt cgtgtggcgt cgttcatggt
     1801 aacctaaaac ccaaaaacat ccttctagac aaaaatttag ttaccaaatt aagtagcttt
     1861 ggaatccatc atcaactttc cctaaccgag gttttatcca ataataacgc atccctatat
     1921 atggatcctg catgtttttt tacaggagag tttactgtga attcagatgc ttattctttt
     1981 ggtgttatat tattgaggtt attaacgggt aagcctactt tggggttaac atatgaagtg
     2041 cggttagcac tgaataatga tactttgaag aatatattgg attcgacagc tggagactgg
     2101 ccatttgttc tggcgcaacg gttggctgtt ttagcaatga gctgctgtga ttttgttact
     2161 acaaataggc ctgattttga aaccgggatt tggagggtga ttgaaccgat acgtgcttct
     2221 tgtggacttt gttcgtttag tttgggttca gagggacgac gagatattcc gcattacttt
     2281 gtttgtccaa tctttcagga cactatggaa gatccggtgg tggcagctga tggatttaca
     2341 tatgaagcag aggctataaa aggatggtta gacagtggcc ataacacctc acctatgacc
     2401 aaccttgagc tagccaacac caaccttgtc ccgaaccatg cacttcggtc tgccattcaa
     2461 gaatggctcc agcaaccatg aattgttttc tgtgagatgc ttctgccata ttattgatga
     2521 tgaatcatct ttcatttgta tatatggaat tcaactgtca tattattgat gatgattcat
     2581 tttcattttt gtgtatggaa tggaaaacta atcttatgaa ttcgccattg ggttcattgt
     2641 agcatagatg ctcggagtat gaatgtatga tacagtaatc tatctatcta ttctatagta
     2701 tctattaagg cgctgtttgt t
//
LOCUS       XM_071832569            1011 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842429), mRNA.
ACCESSION   XM_071832569
VERSION     XM_071832569.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1011
                     /gene="LOC139842429"
                     /note="uncharacterized LOC139842429; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842429"
     CDS             1..1011
                     /gene="LOC139842429"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688670.1"
                     /db_xref="GeneID:139842429"
                     /translation="MENGPWMIRTAPIILNKWAANVSLMKEDLTRVSVWVKLHDVPLT
                     GYNEYGLSMIASKIGKPIMLDSYTSTMCVEAWGRPNYARAMIEIRCKVFGHGDVHCPK
                     NISIPVAMKRIDSEGFQVVKVTKNSVNYTNQNQRQTDGFIVGRRQQKMVYTPTNSVTQ
                     VGSTSGVTESPVDNQARKKDEVPMSNTYAALDGIKEDVETNTFKIVDELSDIEQKHNE
                     ITAFMVPPFEGASTPSIDESHVSISRLNNVCNSVFSHWNWTSNNNVCAQGTRIILGWD
                     PSIVQLIVVITTNQVVHCLAVFHSGKKFYVSFVYAVNNYIQRRQLWKDLSAHKKFMGQ
                     HP"
     misc_feature    <1..249
                     /gene="LOC139842429"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
ORIGIN      
        1 atggagaatg gcccttggat gataagaacg gctccaataa ttctcaacaa atgggctgct
       61 aatgtttcat taatgaagga agatttgact agagtgtcgg tatgggtcaa gctacacgat
      121 gttccattaa ctgggtataa tgaatatgga cttagcatga tagcatcgaa gataggcaaa
      181 cctatcatgt tagattcgta tacgagcact atgtgtgttg aggcatgggg ccgccctaac
      241 tatgctaggg ctatgattga aataagatgt aaagtttttg gtcacgggga tgtgcactgc
      301 ccgaagaaca tttctattcc agtggctatg aaaaggattg atagtgaagg attccaagta
      361 gttaaggtga cgaagaattc agtaaattac accaatcaaa accaaaggca gactgatggt
      421 ttcattgtgg gaaggagaca acaaaaaatg gtttatacgc caacaaatag tgttactcaa
      481 gttgggagca caagtggtgt aacggaaagc cctgtggaca atcaggcaag gaagaaagat
      541 gaggttccaa tgagtaatac gtatgctgcc ttggatggca ttaaagagga tgttgaaact
      601 aatactttta agattgttga tgaacttagt gacattgaac agaaacacaa tgagataact
      661 gcattcatgg ttccaccatt tgagggggca agcactccaa gtattgacga gtcacatgtt
      721 tccattagca gacttaataa tgtttgcaat agtgtgtttt cgcactggaa ttggacatca
      781 aataataacg tttgtgctca gggtactcgc attattttag gttgggaccc atccattgtt
      841 cagcttattg ttgttattac tacgaatcaa gttgttcact gtcttgctgt gtttcattct
      901 gggaagaaat tctatgtttc gtttgtttat gcagtaaata attatatcca acgaagacag
      961 ctttggaaag atctttctgc gcataagaag tttatggggc aacaccctta g
//
LOCUS       XM_071832570             969 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842430), mRNA.
ACCESSION   XM_071832570
VERSION     XM_071832570.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..969
                     /gene="LOC139842430"
                     /note="uncharacterized LOC139842430; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842430"
     CDS             1..969
                     /gene="LOC139842430"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688671.1"
                     /db_xref="GeneID:139842430"
                     /translation="MWSKGNIHDRVIKLHTELYATQAALDINPNSIQLRIAEKSKLQA
                     FNEALLEDNRFLKQKAKVECLRVGDSNSSYFHKVVKERINRNHISVIFDQNDNLVEGA
                     DVSRVFSQHYETFLGSVTSCVNIKEPGPASNDEVKLAMFDIGNDKASDPDGYSSVFFK
                     ESWDIVGDKIIMNRITSCFEDIVQENQSAFILGRRISDNILLTRELMRNYHLDTGVPL
                     VLSRLHIRDCKPLVEMVKKRINDWKNKFLSFPGRVQLISSVLESMQIYWYSVFVIPDT
                     IIKEIEKLIRGFLWCKGEMKRGKAKVKWGVVCLPKIEGGLEIKRLK"
     misc_feature    505..>660
                     /gene="LOC139842430"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtggtcga aagggaacat ccatgatcgg gttataaagc tgcacacaga gttatatgct
       61 acgcaagctg cattggatat taatcctaat tctattcagc tccgtatagc agaaaaatct
      121 aaacttcagg cgttcaatga agcacttttg gaagacaata gattcctgaa gcaaaaggcg
      181 aaggtagagt gccttcgagt cggtgattca aattcgagtt actttcacaa agtggttaaa
      241 gaaagaataa atcgaaatca tattagtgtc atatttgatc agaatgataa tttggtcgaa
      301 ggtgctgatg tgtctcgtgt gttttcacag cattatgaga cttttcttgg ttcagttaca
      361 tcatgcgtaa atattaaaga gccgggccct gcttccaatg acgaagttaa gctggcaatg
      421 tttgatattg gcaacgacaa agcgtcggac cctgatgggt actcttcggt attctttaag
      481 gaatcttggg atattgttgg agacaagatc attatgaatc gtatcacttc ttgttttgaa
      541 gacattgtcc aagagaatca gtcggctttt atcctggggc gtcggatatc tgataacatc
      601 ctattaactc gagagttaat gaggaactat catcttgata cgggcgtgcc attagtttta
      661 tcccgtttgc atatccgtga ttgcaaaccg ttagttgaaa tggtgaaaaa acgtatcaat
      721 gattggaaga ataaattttt atcttttcct gggagggttc agctcatttc ttcggttctt
      781 gagtcgatgc aaatttattg gtattcggtt tttgtcatcc cggataccat tataaaagaa
      841 atcgaaaaat tgataagagg ttttttgtgg tgtaaagggg agatgaaacg aggaaaagcg
      901 aaagtaaaat ggggcgttgt atgccttccg aaaattgagg gaggactcga aattaaacgt
      961 ctcaaataa
//
LOCUS       XM_071832571             774 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842432), mRNA.
ACCESSION   XM_071832571
VERSION     XM_071832571.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..774
                     /gene="LOC139842432"
                     /note="uncharacterized LOC139842432; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842432"
     CDS             1..774
                     /gene="LOC139842432"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688672.1"
                     /db_xref="GeneID:139842432"
                     /translation="MKEDILALFNRFWELDEISNGCNSSFIALIPKKNDPQSFGDYRP
                     ISLIGCLYKILSKVLTKRLQSVISSVIGFEQSAYIKNRYILDGILIANEALHDLKATK
                     HKGFLFKVDFEKAFDRLSNSETNAMVEWLGCASGTLPITYLGLPIGSSMKKLKDWESV
                     FEKLEKRLADWKAKSLSYDGRLTLIKSVLSRIPLNFFSLYKAPICVINKLESLRRRFF
                     WEGRVTSQKCLGLNGTFVCFLENMVGLISGHLQLKIKLY"
     misc_feature    73..>360
                     /gene="LOC139842432"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgaaagagg atattcttgc actttttaat cgattttggg agttggatga gatatcgaat
       61 gggtgtaact cgtcttttat tgcactaatt cctaaaaaga atgatcctca aagttttggt
      121 gattaccgtc ctattagttt aatcgggtgt ttatacaaaa ttttatccaa agtgctgaca
      181 aaaaggctac aaagtgtcat ctcatcggtt atcgggtttg aacaaagtgc atatattaaa
      241 aatcggtata tccttgatgg tattctaatt gctaatgagg cgcttcatga tcttaaagca
      301 acaaaacata aaggatttct ttttaaagta gattttgaga aggctttcga tagattatct
      361 aattcggaaa cgaatgccat ggtcgaatgg cttggatgtg catcaggaac tttaccgatt
      421 acttacctcg gtctccctat tggttcctcc atgaaaaaat taaaggattg ggaatcggtg
      481 ttcgaaaagc tcgaaaaaag acttgcggat tggaaagcta aatcattatc ctatgatggt
      541 cgtctcactc tcattaaatc agtattatct cgtatacctc ttaatttttt ctcactttat
      601 aaggccccaa tttgtgttat taataaattg gaaagtttga gacgtcgttt tttttgggag
      661 ggtcgagtga cgtctcaaaa atgtcttggg ttaaatggga cctttgtatg tttcctcgag
      721 aacatggtgg gcttgatatc gggtcacttg caattaaaaa tcaagcttta ctag
//
LOCUS       XM_071832572            1122 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842433), mRNA.
ACCESSION   XM_071832572
VERSION     XM_071832572.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1122
                     /gene="LOC139842433"
                     /note="uncharacterized LOC139842433; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842433"
     CDS             1..1122
                     /gene="LOC139842433"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688673.1"
                     /db_xref="GeneID:139842433"
                     /translation="MIRFHNPDIFAIQESKRKNVNDNLIEIIWAIKGRWVGKISNSII
                     VNVYGPHTDNLKQKFWDSLESIMQVGIDDWIICGDFNEVRRESERKNCVFIESRAKMF
                     NDFIDKSNLVEIPLGACITKWGDIAACTLDRKYSDHCPIILKVCTNDFGPRPTWVFNN
                     WFEDVECEELIEEAWKLATRNSRADCIVRDKLKKIKLVLKEKCDPKYNTLNVEIDNLQ
                     KEVAKWENLLGSRDLTESEISLWLETRKNWLQKDKQKAEILKQKSRIKWATDGDENIK
                     YFHSCIKRRQNKNNIRGISLNGLWIEDPDTIKLEAFKHFQERFRDTNSRRFKLRGPLE
                     KSLTSEEANFLETPFSLTEIFNAINDVGVKTHPVRMGLI"
     misc_feature    <43..435
                     /gene="LOC139842433"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(142..144,241..243,412..414)
                     /gene="LOC139842433"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgattcgtt ttcacaatcc ggatattttt gcaattcaag aatccaaacg taaaaatgta
       61 aacgataatc tcattgaaat tatttgggct ataaaaggga ggtgggttgg gaaaatttcg
      121 aattcaatta ttgtaaatgt ttatggacct cacacggata accttaaaca aaaattttgg
      181 gatagcctcg aaagtattat gcaggttggt attgatgatt ggataatttg tggggatttt
      241 aatgaagtaa gaagagaatc ggaacgtaaa aattgtgtct ttatagaaag tagggctaaa
      301 atgttcaatg actttattga caaatctaat ttagttgaga ttccgttggg tgcttgtata
      361 acaaagtggg gtgatatagc cgcttgcact ttagatcgaa aatactctga tcattgtcct
      421 attattttga aagtatgcac caatgacttt gggccgagac ctacatgggt ttttaataac
      481 tggtttgaag acgtggaatg tgaagaatta attgaggagg catggaaatt ggcaactaga
      541 aattctcggg ccgattgtat tgttcgtgat aaacttaaaa agataaaatt ggtactaaaa
      601 gaaaaatgcg atccaaaata caacactcta aatgtcgaga ttgacaactt gcaaaaagaa
      661 gtggcaaaat gggaaaatct tttaggctca cgtgatctta cggaatctga aatctcttta
      721 tggcttgaaa cgaggaaaaa ttggttacaa aaagataaac agaaagccga aattttaaaa
      781 caaaaatcaa gaattaagtg ggcaacggac ggggacgaaa atattaagta ctttcactca
      841 tgtataaaaa gacgtcaaaa caaaaacaat attcggggta taagtttgaa tggcttatgg
      901 attgaggatc cggacacaat aaaattagaa gcttttaaac actttcaaga aagattccga
      961 gataccaatt caagaaggtt taaactccgg ggtcctttag aaaaaagcct cacttccgag
     1021 gaagcaaatt ttcttgaaac acctttttcc cttacggaaa tttttaatgc tattaatgat
     1081 gtgggggtga aaacgcaccc ggtccggatg ggtttaatat ga
//
LOCUS       XM_071832573            1884 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein trichome
            birefringence-like 25 (LOC139842434), mRNA.
ACCESSION   XM_071832573
VERSION     XM_071832573.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1884
                     /gene="LOC139842434"
                     /note="protein trichome birefringence-like 25; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139842434"
     CDS             1..1884
                     /gene="LOC139842434"
                     /codon_start=1
                     /product="protein trichome birefringence-like 25"
                     /protein_id="XP_071688674.1"
                     /db_xref="GeneID:139842434"
                     /translation="MDKFNVNNEGWVRGEDSLSSKWRDVNKACTEFLPIFVDIAEHWR
                     SGCNDDDIYKSVEDSYMSQYEKAFLYKEAFFFFLRDHPKWRVPKDPVGKAQEKFVNVN
                     DVVGESQGDPVRLSQDFDEAELFGEIPMQRPMGRDRAKKAQKNRFLRTQVKNKKHCTA
                     ALITIKTNLDHTLNFNMLIDTIYLNQKQFTKKMFVKIIVFLILMGFAYRIYSPTYIQV
                     IPPAINNDDAYSNLSPTSAVVEANFTVSGQIPVDDHSTYEGSPICDVFTGEWVRDYTS
                     PQYTNNSCDTIEHHQNCMKNGRPDSSYLYWKWRPRDCELPRFNPKRFLDFMRNKSMAF
                     IGDSISRNHVQSLLCILSQVERPVEVYHDEEYRSKRWFFVSHEFTLSVIWSPFLTKAK
                     IFEDNDGHSSDAVQVHLDEPDSEWVSELGNFNYIEIAAGKWFLKTAVYYENNTIFGCH
                     NCKKENVSEVEFYYAYRRALQTALDFITRSNHNVYALFRTTTPDHFENGEWNTRGYCN
                     RTVPFKNGDIELRDIDTIMREIELEEFKKAVEDLNMSRKGSSLKLFDTTRLALLRPDG
                     HPGPYRAYHPFDGKETNTYVQNDCLHWCLPGPIDSWNDLLMNILLNRQRKKKKVMNLT
                     FKR"
     misc_feature    787..942
                     /gene="LOC139842434"
                     /note="PMR5 N terminal Domain; Region: PMR5N; pfam14416"
                     /db_xref="CDD:464168"
     misc_feature    943..1821
                     /gene="LOC139842434"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; Region: PC-Esterase; pfam13839"
                     /db_xref="CDD:463996"
ORIGIN      
        1 atggataagt ttaatgtaaa caatgaagga tgggtacgcg gtgaagattc gttatcttca
       61 aaatggagag atgtcaacaa ggcatgtacg gagtttttgc cgatctttgt agatatagcc
      121 gagcattggc gtagtggttg taatgatgat gacatttaca agagtgtgga ggactcatat
      181 atgagtcaat atgaaaaagc gtttttgtac aaggaagcgt tttttttttt cttgagagat
      241 catccaaagt ggagggtacc taaagatccg gttggtaaag ctcaagaaaa gtttgtgaat
      301 gttaatgatg ttgtggggga aagtcaagga gacccggtac gactctcgca agactttgac
      361 gaggcggagt tgtttgggga aataccgatg caacgtccaa tgggacgtga tagagcgaag
      421 aaagcccaaa aaaatcggtt tcttcggacg caggtaaaga acaaaaaaca ttgtacagct
      481 gcactaataa ctattaaaac caatttggac catactctca acttcaacat gcttattgac
      541 accatttact tgaaccaaaa gcaattcact aagaagatgt ttgttaagat catcgttttt
      601 ttaattctca tgggttttgc atatcgtatc tattccccaa cttacattca ggtcattcca
      661 ccggcaatta acaacgacga tgcttacagc aatttgtcac ctacgtcggc agtggtggaa
      721 gctaatttca cagtttccgg tcaaattccg gttgacgatc acagtacgta tgagggttca
      781 ccaatttgtg acgtatttac tggagagtgg gttagggatt acaccagtcc acaatacact
      841 aacaatagct gtgacacaat tgaacatcat cagaactgta tgaaaaatgg gaggcctgat
      901 tcgagttatc tctactggaa atggagaccc cgagactgcg agttacccag attcaaccct
      961 aaaagatttc ttgattttat gaggaacaag tctatggcgt tcattggcga ctcaatctca
     1021 cgcaatcacg tgcaatcgtt gctatgcatt ctttctcagg tggaacgccc ggtagaggtg
     1081 tatcatgacg aggaatacag aagcaaaaga tggttctttg tttcacatga gttcaccctt
     1141 tcagtaattt ggtctccttt tttaacaaaa gccaaaatct ttgaagataa tgatggacat
     1201 tcatctgatg cagttcaggt ccatcttgat gagcctgatt cagaatgggt cagcgaattg
     1261 ggtaacttca actatataga gatagctgcc gggaaatggt tcttgaaaac agcggtctac
     1321 tatgagaaca atactatttt cgggtgtcat aattgtaaaa aagagaatgt atcagaggtt
     1381 gagttttatt acgcataccg tagagcttta cagacggctc tcgacttcat cacgaggtcc
     1441 aatcacaacg tttatgcctt gtttagaacc actacacctg atcattttga aaatggcgag
     1501 tggaatacta gagggtattg taatagaaca gttcccttta aaaatggtga tattgaattg
     1561 agagatatcg atacgataat gagagaaatt gaattggaag aatttaagaa ggctgttgag
     1621 gatttgaata tgtcaagaaa aggctcaagt ttgaaacttt ttgatacgac tcgtttggca
     1681 ttgttaagac cagacgggca tcctggtccc taccgtgcgt atcacccatt tgatgggaaa
     1741 gaaacgaaca cttacgttca gaatgattgc ttacattggt gcttgcctgg cccaattgac
     1801 tcatggaatg atctactaat gaacatactg cttaatcgcc aaagaaagaa aaaaaaagta
     1861 atgaatttga cattcaaaag ataa
//
LOCUS       XM_071832574            2247 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842436), mRNA.
ACCESSION   XM_071832574
VERSION     XM_071832574.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2247
                     /gene="LOC139842436"
                     /note="uncharacterized LOC139842436; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842436"
     CDS             1..2247
                     /gene="LOC139842436"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688675.1"
                     /db_xref="GeneID:139842436"
                     /translation="MSYTLLKSRVDILCVQETRWRGEEAVDIDDYRLWFSGSRVARNG
                     IGIFIGPLYKDNIVGVDRCSDRIMAVRLVIQEETYMVICAYAPHAGLGDEEKSRFWES
                     LDEVVRSCPADHRLLFGGDLNGHIGTFSDGYTGVHGGFRYGVRNEEGRSILEFAVAHD
                     LVVANSFFRKTEAQLATFHSGGHSTQIDYLLLRKGDLRACRDCRALTTWTCSTQYRLL
                     VMDLVVQRRVTRRVRPVQPRILWKKLNEVNAETFKASVLERVEAGMDTVTQVNVDQMW
                     NSLATTIRDVAKETLGVAVGTSRGHKSSRESWWISDEVQTKVALKQLRFREPIRCRDG
                     TRDDRTRAEERYKEANREAKKAVARAKDKAYEDLYRKLYSKEGANDIYRIAKARERRR
                     RDIDITKFIKDEAGQTIVKEEEIRKRWEGYFSSLFVGEGLGRQEDPQDLGIGQFRNNN
                     FCRRISQGEVRSALRKMGRNKAVGPDQIPIEAWRCLGDDGVREKQKGLEMVFLDLEKA
                     YDSVPRKLIWKTLNVRGIPSKYIRAIIDMYDGAKSCVRTPVGNTEYFSIEVGLHQGSA
                     LSPFLFALILDELSQGIQENIPWCLIFADDIVLVSEQKDELNRRLERWREALEQNGLR
                     ISRQKTEYLRFVCMFFACFVGVCMYVGTCSCRYLGMFMYGCMLPVLLSNGVFRGLVRN
                     RVFIGFLGDGVFVCLVETRVFGGFVGDSVFVNFVKAGVFLGFVGDDVFVDFVGVEAFL
                     LCRQHKYK"
     misc_feature    10..666
                     /gene="LOC139842436"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(49..51,253..255,361..363,367..369,562..564,640..645)
                     /gene="LOC139842436"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(49..51,640..642)
                     /gene="LOC139842436"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(253..255,367..369,643..645)
                     /gene="LOC139842436"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    <1462..1893
                     /gene="LOC139842436"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(1510..1527,1687..1692,1777..1779,1783..1788)
                     /gene="LOC139842436"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(1510..1527,1687..1689,1783..1785)
                     /gene="LOC139842436"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    1690..1692
                     /gene="LOC139842436"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgtcctata cgttacttaa gagtagagtg gacatattgt gtgttcaaga gaccagatgg
       61 agaggtgaag aggcggttga cattgacgac tacaggttgt ggttttcggg ttctagagta
      121 gctagaaacg ggatagggat ctttatagga cccctttata aggataatat tgtgggtgtg
      181 gataggtgta gcgataggat tatggcggtt aggttagtta tccaggagga gacttacatg
      241 gtcatttgcg cttacgcacc tcatgctgga ttaggagatg aagaaaaaag ccgcttttgg
      301 gaatcgttag acgaagttgt gaggagttgc cccgctgacc atcgtttgct ttttgggggt
      361 gaccttaatg gacatatagg aacgttttcg gacggatata cgggtgtcca tgggggcttt
      421 aggtacggag ttcgaaatga agaaggacgc tctattctcg aattcgctgt tgcccacgat
      481 ttggttgttg caaactcttt ctttaggaag acggaagcac aacttgcaac tttccatagt
      541 gggggacata gtacccagat tgactatttg ctgcttcgca aaggggacct tagggcttgc
      601 agagactgta gagccctgac tacctggacc tgttccaccc aataccgatt attggtcatg
      661 gacttggttg tgcagaggcg ggttactagg agagtgagac ccgtccaacc taggatcctt
      721 tggaagaagc tgaatgaagt gaatgccgaa acttttaaag cgtcagtttt ggaaagagta
      781 gaggcaggaa tggatacggt tactcaagtg aacgtagatc agatgtggaa tagtttggca
      841 acaactatta gagatgttgc caaggaaaca ttaggtgtgg cagtagggac atcgagagga
      901 cataagtcta gtagagaatc atggtggatt agtgatgagg ttcaaaccaa agttgcgctt
      961 aagcaactga ggtttaggga gcccattaga tgtcgggacg ggacacgtga tgatagaact
     1021 agggcagagg agaggtataa agaagccaat agagaagcta agaaggccgt tgcccgtgca
     1081 aaagataaag cgtatgaaga tttgtataga aaactatact ctaaagaagg agcaaatgat
     1141 atttacagga ttgcaaaagc gagggagcgt aggaggaggg atatagatat caccaagttt
     1201 atcaaggatg aagccggtca aaccatagtg aaggaagaag aaattaggaa aagatgggaa
     1261 gggtatttct catctctttt cgtgggtgaa ggactcgggc gccaagagga tccacaggac
     1321 ttgggaatag gacaattccg gaacaacaac ttctgtagga gaatcagtca gggagaagta
     1381 agatcggcac tacgaaaaat gggtagaaac aaagctgtag gaccggacca gattccaata
     1441 gaggcgtggc ggtgccttgg cgacgatggt gtcagggaga aacaaaaggg tctagagatg
     1501 gtcttcttag acttagaaaa ggcctatgat agcgtaccgc gaaagctgat ttggaagacc
     1561 cttaatgtta ggggtatccc aagtaagtat attagagcta ttatagatat gtacgatggg
     1621 gcgaagtcct gtgttaggac gcctgtggga aacacggagt atttctcgat agaagtaggc
     1681 ttgcatcagg gatcagccct tagtcctttc cttttcgctt tgatcctcga cgagctgtct
     1741 caaggaatac aagaaaacat cccttggtgt ctgatttttg ccgatgatat cgtgcttgta
     1801 tcggaacaaa aggatgaact taatagaaga ctagaacgat ggagggaggc cttagaacaa
     1861 aatgggctac ggatcagtag acaaaagacg gaatatctaa ggtttgtatg tatgtttttt
     1921 gcttgttttg ttggcgtttg tatgtacgta ggtacgtgtt cttgcaggta tttaggtatg
     1981 tttatgtacg gttgtatgct gcctgttctt ctttcaaatg gtgtgtttcg aggtttggtt
     2041 cggaatcgtg tattcatagg gtttcttgga gatggtgtgt ttgtttgttt ggttgagact
     2101 cgagtgttcg gaggttttgt tggagacagt gtgtttgtga attttgttaa ggctggagtg
     2161 tttctaggtt ttgttggaga tgatgtgttt gtggattttg ttggggttga agcattctta
     2221 ctttgtcgac aacataaata taaatag
//
LOCUS       XM_071832575            1428 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            At5g41620-like (LOC139842437), mRNA.
ACCESSION   XM_071832575
VERSION     XM_071832575.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1428
                     /gene="LOC139842437"
                     /note="uncharacterized protein At5g41620-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842437"
     CDS             1..1167
                     /gene="LOC139842437"
                     /codon_start=1
                     /product="uncharacterized protein At5g41620-like"
                     /protein_id="XP_071688676.1"
                     /db_xref="GeneID:139842437"
                     /translation="MGDGIKKLKIGNIIAKKANKTVTTPSTCWKTLNNSLDSNFSMKA
                     CVSARTIGANLWEVEPQFDFSKNHPDDDDDDDDHHHHHNGGLRNQPRRRHPPPETETS
                     LRRNIKEVASKSHVPAEENDQDLRQVTPYAPGVTATGYSLKTSAHLLKVLDRIWNLEE
                     QHMSNVTLIKSLKHDLDISRAQIKTLVEERKNDHQEINELKKSTHERKKKALQSTSHE
                     ISDVKSSFMREKKAQILLESLCDEFAKGIRDYEQKVRILQQNRSRKDPIMIKNEPDRL
                     ILHVSEAWLDERAFSGKTSISEDLRYEIEMFLKAKNKVFRGINFENEETVENHEEIKL
                     YGGITESSPVSGPAEVGPRDREEVRKNTLMAKLIEARLESQFSKSRTVRKPKLL"
     polyA_site      1428
                     /gene="LOC139842437"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgggtgatg gaattaaaaa gttgaaaatt gggaatataa ttgcaaaaaa agccaacaaa
       61 acagtcacca ctccttcaac ctgttggaaa acactaaata atagtttaga ttccaatttc
      121 tcaatgaaag cttgtgtttc cgcaagaacc atcggtgcta atctttggga agttgaaccc
      181 caattcgatt tcagtaaaaa ccatccagat gatgatgatg atgatgatga tcatcatcat
      241 catcataacg gtggtctgag aaaccaacct cgccggcgcc atccacctcc agaaactgag
      301 actagtttga ggagaaatat aaaagaagta gcaagtaaaa gccacgtacc agccgaagaa
      361 aatgatcaag atctgcgtca ggtgacacct tatgctcctg gtgtaaccgc aactggctac
      421 tcactcaaga cgtcagcaca tctgcttaaa gttctcgatc gaatttggaa tcttgaagaa
      481 caacatatgt cgaatgtgac tctaatcaaa tcattgaaac acgatcttga catttcacga
      541 gcacaaatta agacactagt ggaagaaagg aaaaatgatc atcaagaaat taatgaatta
      601 aaaaagtcaa cacacgagag gaagaaaaag gctctccagt caacgtcaca cgagatttca
      661 gatgtaaaat cttcgttcat gagagaaaag aaagcgcaga ttttgcttga aagtttgtgt
      721 gatgaattcg caaaagggat aagagattat gagcagaaag tgagaatttt gcagcaaaat
      781 cgtagtagaa aagatccaat tatgatcaag aacgaacccg atcggctaat cctacacgtt
      841 tcagaagctt ggcttgatga gagggctttt tctggaaaaa cgtcgatttc tgaagacttg
      901 cgctatgaaa ttgaaatgtt tcttaaggcc aaaaataaag tgtttcgggg tattaatttt
      961 gaaaatgaag aaactgttga aaatcatgaa gaaattaaat tgtatggagg cattaccgag
     1021 tcatctccag tgtcgggccc cgctgaagtt ggtcctcgtg atcgtgaaga agtaagaaag
     1081 aacacattaa tggcaaagtt gattgaagca aggttagaaa gccagttttc taaatcaaga
     1141 acagtaagaa agccgaaatt actttagctt agattttagt attttacttt tttagttctg
     1201 atatggaatc gtctgatatc ggatcataac gcttataagt tacacctgta tgaatttaac
     1261 atatgatcca ttgttctgtt gttggcctac gaccctggtg accaacttgt tagatgcatc
     1321 cttgctgaca tattatatgt catatgataa aaggatcata catttactcg agtctcgcat
     1381 ttcgaaacac caaactgaaa tatgaatgct gtactttgat tttagaaa
//
LOCUS       XM_071832576             888 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842438), mRNA.
ACCESSION   XM_071832576
VERSION     XM_071832576.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..888
                     /gene="LOC139842438"
                     /note="uncharacterized LOC139842438; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842438"
     CDS             1..888
                     /gene="LOC139842438"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688677.1"
                     /db_xref="GeneID:139842438"
                     /translation="MEITTSNSNMDDAVVVVPEEITKILEINLISAQNLKIPSSAITM
                     MRRRMRTYTLAWVDPNNKLRSNLDLIGGENPTWNDKFIFRVSQDFIDGDTSAVQFQIY
                     AVGLIRDYFIGTVRYILSSSPISSRSGDVSGIPGFSALHIRRPSGRVHGVLNIAATVY
                     NSSDFPSLIGINTICFRDLIGKNNGSDYKFGEWQLSRFINHFKGYKRNEQKESVSEAD
                     ESCEDSVYFSDGTDKTTSSSSSCTTITAFRDGNTVGSNLLVAGKRDLKSEGGGLLRGL
                     MISQLKCGRLDQKLPFVKK"
     misc_feature    70..465
                     /gene="LOC139842438"
                     /note="C2 domain present in Soybean genes Regulated by
                     Cold 2 (SRC2)-like proteins; Region: C2_SRC2_like;
                     cd04051"
                     /db_xref="CDD:176016"
ORIGIN      
        1 atggaaatca ctactagcaa cagcaacatg gatgatgcag tagttgtagt acccgaagag
       61 atcacaaaaa ttcttgagat caacttgatc tccgcccaaa atttaaaaat cccttcttct
      121 gcaattacaa tgatgcgacg tcgtatgcgc acctacacgc tcgcgtgggt cgatccgaac
      181 aacaagcttc gcagcaatct cgatttaatc ggtggggaaa atcctacgtg gaatgataaa
      241 ttcattttcc gcgtttctca agacttcatc gacggtgaca cgtcagctgt tcaattccaa
      301 atctacgccg taggattaat tcgagattac ttcatcggaa ccgttcgtta tattttaagt
      361 agcagcccta tttcgtcacg atcgggtgac gtcagcggaa ttccaggttt ctcggctctt
      421 cacattcgtc gtccttccgg tagagttcac ggcgttttaa atatcgctgc gacggtttac
      481 aacagttccg attttccgtc gttgatcgga attaatacga tttgttttcg tgatctgatc
      541 ggaaaaaata acgggagtga ttataagttc ggtgaatggc aattgtcacg gtttattaat
      601 catttcaaag gatataaacg gaacgaacaa aaggaatcag tatctgaagc ggatgaatct
      661 tgtgaagatt cggtttattt ctccgatgga accgacaaaa cgacgtcgtc gtcatcgtct
      721 tgcactacaa ttacggcgtt tagggacggt aatacagttg gatcgaatct tttggtggcg
      781 ggaaagagag atttgaaatc ggagggtggt ggtttgttgc gtgggttaat gatttcccag
      841 ttgaagtgtg gacggttgga tcagaagctt ccgtttgtta aaaaatag
//
LOCUS       XM_071832577             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842439), mRNA.
ACCESSION   XM_071832577
VERSION     XM_071832577.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139842439"
                     /note="uncharacterized LOC139842439; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139842439"
     CDS             1..603
                     /gene="LOC139842439"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688678.1"
                     /db_xref="GeneID:139842439"
                     /translation="MAEKMRYVCLNNFCKCIIDLYGREYLRKPTATDVARLYSEHEEK
                     HGFKGMLGSIDCMHWAWKNCPVAWKGSNNDINVLNHYPLFDSLKKDRAAPSPFEVNGH
                     VYPFGYYLADEIYPDCTTLIKGYSTPIDEPRVKFTRFQASARKDVERTFGVLQGRFAI
                     LKTPARVMSVNKMRRIMYSCIVMHNMIQEDNSIALSTWEQ"
     misc_feature    70..570
                     /gene="LOC139842439"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcggaga aaatgagata tgtttgctta aataactttt gcaagtgtat aattgattta
       61 tatggccgag aatatttgcg gaagccgacg gcaactgacg ttgctcggtt gtattcagag
      121 cacgaggaga aacatggttt taaaggaatg ttgggtagta ttgactgtat gcattgggct
      181 tggaaaaatt gtcccgttgc atggaaaggt tcaaacaacg acataaatgt gttgaatcat
      241 tatccattgt ttgattcact aaaaaaggat agagctgcac cgtctccgtt tgaagtaaac
      301 ggacatgtct atccctttgg ttactacttg gcagacgaga tatatcctga ttgtacaacc
      361 ttaataaagg gatattcgac gcctattgat gagccacgag tcaaatttac tagatttcaa
      421 gcgagtgctc gaaaggacgt agagcgtaca tttggtgttt tacaaggtag gtttgcaatt
      481 ttaaaaactc cggcacgagt tatgagcgtt aacaagatga gaaggataat gtacagttgc
      541 attgttatgc acaacatgat acaagaagat aacagtattg ccttgagtac ttgggaacaa
      601 taa
//
LOCUS       XM_071832578             384 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842440), mRNA.
ACCESSION   XM_071832578
VERSION     XM_071832578.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..384
                     /gene="LOC139842440"
                     /note="uncharacterized LOC139842440; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842440"
     CDS             1..384
                     /gene="LOC139842440"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688679.1"
                     /db_xref="GeneID:139842440"
                     /translation="MIPAEVFVPTHRVANFDESANEDGICENLNFIEERRLMASIREA
                     NNKQQIAKYYNKKVRALALDVGEWVLRNNEASRAEKLEKLGPNWEGPYQIVGINAAGS
                     YKLQDIEGRRIPNVWHATLLKRYYM"
ORIGIN      
        1 atgattcccg cggaagtctt tgtcccaacg catagagttg ctaactttga tgaaagtgcg
       61 aatgaagatg gcatttgtga aaacttaaat ttcattgagg aacgcaggct tatggcctca
      121 ataagagagg caaacaataa gcaacaaatt gccaagtatt acaacaagaa ggtgcgcgcg
      181 ttagccctcg atgtcggcga gtgggtcttg cgaaataatg aagcaagtcg tgctgaaaaa
      241 cttgaaaaat tgggacctaa ttgggaggga ccataccaaa tagtgggaat caatgcagca
      301 ggctcttata aactccaaga tattgaaggg cgtcgcatac ctaacgtgtg gcatgctact
      361 ttgttgaaaa gatactacat gtaa
//
LOCUS       XM_071832579             507 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842441), mRNA.
ACCESSION   XM_071832579
VERSION     XM_071832579.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..507
                     /gene="LOC139842441"
                     /note="uncharacterized LOC139842441; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842441"
     CDS             1..507
                     /gene="LOC139842441"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688680.1"
                     /db_xref="GeneID:139842441"
                     /translation="MAHKMNILQLRAYVDSQLVVNQFNGSFEAHELSMQKYLKLVQEA
                     AEKFEFFELSQVSRSQNKKADTLSKLTALTFSHFQKQVWVEELPNKSIDRSLIVAAIE
                     EVQPNWMDPVVHYLRNSTLPEDKKEARLVPERSPMYVIENDMLYRKSYLGPLMRCVGL
                     AGATTIIK"
     misc_feature    <4..210
                     /gene="LOC139842441"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggcgcata aaatgaatat tttgcagtta cgcgcgtatg tggattcgca gttagtggta
       61 aatcaattca atggctcatt tgaagctcat gagttatcta tgcaaaagta tttgaagcta
      121 gtgcaggaag ctgcggaaaa atttgaattt tttgaattat cacaagtatc aagaagtcaa
      181 aataaaaagg cggacacgct aagtaagctt actgcattga ctttttcgca tttccaaaag
      241 caggtctggg ttgaagaact tcccaataag tccattgatc gtagtttgat tgttgcggct
      301 atagaagaag ttcaaccaaa ttggatggat cctgtagtgc attatttgcg caatagtaca
      361 ctaccagaag acaagaaaga agctcgatta gtgccagaaa gatctcctat gtatgtgatt
      421 gaaaacgata tgttatatcg caaatcatat ctgggaccat taatgcggtg cgtaggactc
      481 gcaggggcta caacgattat taagtag
//
LOCUS       XM_071832580            1068 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842443), mRNA.
ACCESSION   XM_071832580
VERSION     XM_071832580.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1068
                     /gene="LOC139842443"
                     /note="uncharacterized LOC139842443; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842443"
     CDS             1..1068
                     /gene="LOC139842443"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688681.1"
                     /db_xref="GeneID:139842443"
                     /translation="MNLKVHKGHNSFSAKHSPRALQNVQDVKLISTIHKKKGFKKLKA
                     AEILEKWQLTPITFPFEQNCDVSDKPLVISCKIANTGIIIMKIHVDTGSSIDLIYEQC
                     FRQLLECIKTELKATAISLSGFAGESAWPKGKLSLKIELCDETDIKLTRQAQLYFYVI
                     RSASRYNMLLGRFALRKLGIIPSTIHRMVKFTTCKGVATINSMAMQPIYATISTQGAI
                     VECNIAEDKMVVVNRRYPDQKIKIGTELNEAIRKKIIRLLVAYMDVFAWSEQDMTGVP
                     RNVAEHRLNANPALKPIVQKRRGMAPDRMKWLCAEVTKLVNAGILREVKYQTWVANLV
                     LVKNPDDSWRMFIEFKDINKA"
     misc_feature    217..516
                     /gene="LOC139842443"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(268..270,274..276,280..282,361..369,505..507)
                     /gene="LOC139842443"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    268..276
                     /gene="LOC139842443"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    268..270
                     /gene="LOC139842443"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(361..372,382..393)
                     /gene="LOC139842443"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaatttga aggtgcataa agggcacaat tctttttcag ccaaacattc acctagagca
       61 cttcaaaatg tacaagatgt gaaactaata agcacaatac ataagaagaa agggtttaaa
      121 aagctaaaag cagcagaaat acttgaaaaa tggcagctta cgcctatcac tttcccattt
      181 gagcaaaact gcgatgtgtc tgataagccg ttagtcattt cgtgcaagat cgcgaacact
      241 ggaatcataa ttatgaaaat acatgtcgac actggtagca gcatagattt gatatatgag
      301 caatgctttc gccaattgct agaatgcatt aaaacagaat taaaggcaac cgcgatatct
      361 ctgtctggtt tcgcgggtga atctgcatgg cctaagggga aattatcact aaaaatagag
      421 ttgtgtgacg agacagacat aaaattaact agacaagcgc agctatactt ttatgttata
      481 cgatcagctt cgcgttataa tatgttgttg ggaagatttg cgttgcgcaa acttggcata
      541 ataccgtcta caatacacag aatggtcaaa ttcactacct gcaagggtgt ggcaacaata
      601 aactccatgg ctatgcagcc tatttatgcg actataagca cgcaaggtgc aattgttgaa
      661 tgcaatattg cagaagataa gatggttgtt gtaaatcgta gatatcctga tcaaaaaata
      721 aaaattggca ccgaattgaa tgaggcaata agaaagaaga ttatacgctt acttgtcgca
      781 tacatggatg tgtttgcttg gagtgagcaa gatatgactg gagttccgcg taatgttgca
      841 gaacatagat taaatgccaa tcctgcatta aagcctatcg tgcaaaagcg cagaggaatg
      901 gctcctgatc gcatgaaatg gttatgtgcg gaagttacca agttagtcaa cgcaggcatt
      961 ttgcgcgaag taaaatatca aacatgggtt gcgaacctag tgttggtaaa aaatcctgat
     1021 gattcgtgga ggatgttcat agaatttaaa gacataaaca aagcttga
//
LOCUS       XM_071832582             726 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139842444), mRNA.
ACCESSION   XM_071832582
VERSION     XM_071832582.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..726
                     /gene="LOC139842444"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139842444"
     CDS             1..726
                     /gene="LOC139842444"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071688683.1"
                     /db_xref="GeneID:139842444"
                     /translation="MLGSIDCMHWAWKNCPVAWKGQYTRGDHGHPTIMLEAVASYDMW
                     IWHAFFGMAGSNNDISVLNHSPLFDSLRKDRAAPSSFEVNENQYPFGYYLADGIYPDW
                     TTLIKGYTTPIEEPRKKFTKFQASARKDVERTFVVLQGRFAILKTPARVMSVNKMRKI
                     MYSCIVMHNMIQEDNGFALSTWEQEWLDKPENRPRRNIRRRVEDRRSREKEIRDRDVH
                     DQLREDLTAHIWNLPPNFRSMHN"
     misc_feature    1..528
                     /gene="LOC139842444"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgttgggta gtattgactg tatgcattgg gcatggaaaa attgtcccgt tgcatggaaa
       61 ggtcaatata cgagaggtga tcacggtcac ccgacgatca tgcttgaagc ggttgcttca
      121 tacgatatgt ggatatggca tgcgtttttt gggatggcgg gttcaaacaa tgacattagt
      181 gtgttaaatc attctccgtt gtttgattcc cttcgtaagg atagagccgc accttcatcg
      241 tttgaagtaa acgaaaacca gtatcccttt ggttactact tggcggacgg gatatatccc
      301 gattggacaa cactaataaa ggggtatacg actcctattg aagagcctag gaaaaaattt
      361 actaaatttc aagcgagtgc tagaaaggat gttgagcgta catttgttgt tttacaaggt
      421 cggtttgcga ttttaaaaac accggcacga gttatgagtg ttaataagat gagaaagata
      481 atgtatagtt gtattgttat gcacaacatg atacaagaag ataacgggtt tgcgttaagt
      541 acttgggaac aagaatggtt agataaaccc gaaaaccggc ctcgtcgcaa tattcggaga
      601 agagtcgaag atcgtcgatc acgagagaaa gagattcgcg atcgagacgt gcacgatcaa
      661 cttcgtgaag atttaacggc tcatatttgg aacctcccgc caaactttcg ctcgatgcat
      721 aactag
//
LOCUS       XM_071832583             423 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842445), mRNA.
ACCESSION   XM_071832583
VERSION     XM_071832583.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..423
                     /gene="LOC139842445"
                     /note="uncharacterized LOC139842445; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842445"
     CDS             1..423
                     /gene="LOC139842445"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688684.1"
                     /db_xref="GeneID:139842445"
                     /translation="MDLSDDIFGASLNLEETHLNEGFQEGYNAGFSSGKEDGREVGLK
                     TGFVTGEELGFYRGCVGVWKSAIRVDPTCFSTRVQKNIKEMDKLVSEYPILEPENESV
                     TDIMGSLRLKFRAICATLNVKLEYSGYPKASDSNETQF"
     misc_feature    64..180
                     /gene="LOC139842445"
                     /note="Essential protein Yae1, N terminal; Region: Yae1_N;
                     pfam09811"
                     /db_xref="CDD:430844"
ORIGIN      
        1 atggatcttt cggacgacat atttggcgca tctttaaatt tagaagagac tcacttgaac
       61 gaaggctttc aagaaggtta taatgctggt ttttcttccg gaaaagaaga cggacgtgaa
      121 gttggattga aaacagggtt cgttaccggc gaggagttgg gattttacag aggttgcgtt
      181 ggcgtttgga aatctgcaat tcgagttgac ccaacatgtt tctcaactag ggttcaaaag
      241 aacattaaag agatggataa gttggtatcc gagtatccga ttttggagcc agaaaacgag
      301 tcagtaacag atattatggg gtcattaagg ctaaagttcc gggctatttg tgcaacgctg
      361 aatgttaagt tggagtacag tgggtacccc aaagcctctg actcgaatga gactcagttt
      421 taa
//
LOCUS       XM_071832584            1233 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139842446), mRNA.
ACCESSION   XM_071832584
VERSION     XM_071832584.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1233
                     /gene="LOC139842446"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842446"
     CDS             1..1233
                     /gene="LOC139842446"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like"
                     /protein_id="XP_071688685.1"
                     /db_xref="GeneID:139842446"
                     /translation="MYPLDTDDDEDIVEAVQDLFKEVHVGDRVGSSSTPCPNPAHKGG
                     SSNVITYKIENRAGKKIVKKMVNVFSFDFCSALSLCGGSVIYNFCSIKKNSQISGEIV
                     QQTGRIEDKVYVAVGNDLKECRSTLLWALQNSGGVCVEVQYIETEYIEKGIVEFVLQH
                     NVRRLVLGAAADMQNSSLYAKEKLFLRGKSIPSSAYVSEGHQIILHTDNPTQDDGTTS
                     KFNEDNQNATSFSLRQERSINDELYDLLVQAIEDADKSKRDAFEESIRCRKLQKDVIE
                     AKRKVSVSKKLCAKELRIRLEVEEMLERTVEELQMELEQKSSLESQIADSVDIVNELE
                     QEVFSKDNQLKIYKKERDKLKVECDDAVRLVEELTEKHADEALNFYSEFESSEVKDVI
                     RNFDPSLKIGEGSSHTTI"
     misc_feature    331..>516
                     /gene="LOC139842446"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; Region: AANH_superfamily; cl00292"
                     /db_xref="CDD:469708"
     misc_feature    733..>1104
                     /gene="LOC139842446"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
ORIGIN      
        1 atgtatccac ttgatactga cgacgatgaa gatatcgtag aagcggttca agatttgttc
       61 aaagaagttc atgttggtga tcgagttggt tcttcttcga ctccgtgtcc caatccggca
      121 cataaaggtg ggtcctccaa tgttataaca tacaagatcg agaatcgagc cgggaaaaaa
      181 attgtaaaaa aaatggtaaa tgtatttagc tttgattttt gctccgcttt atctctttgt
      241 ggaggctcgg ttatctataa tttttgttca attaaaaaaa attcacaaat tagtggtgaa
      301 attgttcaac aaacaggtcg tattgaggac aaagtctacg tagctgttgg gaatgacttg
      361 aaagaatgtc ggtcaactct actgtgggcc ctacagaatt caggaggtgt gtgcgtggag
      421 gtgcagtata ttgaaacgga atatatcgag aaaggtattg ttgaatttgt acttcaacac
      481 aatgtcagaa ggcttgtcct gggagcagcc gcagacatgc aaaattcaag tttatacgca
      541 aaggagaagt tatttttacg aggaaagagt attccgagtt cagcatatgt tagtgaagga
      601 catcaaatta tattacatac tgacaaccca actcaagacg atggtacaac gtctaaattc
      661 aacgaggata atcaaaacgc tacatcattc agtctcagac aagaaagaag tataaatgat
      721 gagctttatg acctgcttgt acaagccatt gaagatgcag ataagtccaa acgagatgct
      781 tttgaggagt ctatcaggtg tcggaaatta caaaaagatg tcatagaggc taagcgaaag
      841 gtgagtgtat ctaaaaagtt gtgtgcgaaa gaactgagaa taaggctaga ggtagaagag
      901 atgctagaaa gaaccgtgga agaactccaa atggaactcg aacaaaagtc atctctagaa
      961 agtcaaattg cagattctgt cgatattgta aacgagcttg aacaggaagt gttctctaag
     1021 gataatcaac ttaaaattta taaaaaagaa cgtgacaaat tgaaggtaga atgtgatgat
     1081 gcagttagac tagtcgagga actaacagag aaacatgcag acgaagcctt aaacttttac
     1141 tctgagtttg agtcttcaga agttaaagac gtcattcgta actttgaccc gtcacttaag
     1201 ataggagaag ggagttctca tactacgatt tga
//
LOCUS       XM_071832585            2574 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139842447), mRNA.
ACCESSION   XM_071832585
VERSION     XM_071832585.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2574
                     /gene="LOC139842447"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139842447"
     CDS             1..2574
                     /gene="LOC139842447"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like"
                     /protein_id="XP_071688686.1"
                     /db_xref="GeneID:139842447"
                     /translation="MESAQIAIQTIRYPVVDTSEIIEIKDDIVEKTCPTVVNNNKIYV
                     AVGTKLKESQPTLQWAIENSGGRHLHVHQPPEKIPFSNLFFVAGIINTHQVVAHHKAE
                     KQHMLKLLKKYNQICEKSGVCAEVQYIEMESIEKGIVEFICKHNVRNLVMGAAADRQY
                     SRKMVDLRSKKAIYVCMQATASCQIQFICKGNIIFTRPGRLDGLGVSRSSSSSLPDTT
                     SNSELNSSLSRSVSERQNTILQVNSSTRDCRKVNSDFRRTGITTSLRDFNVNLTPTSR
                     FSSGSATDFWNGISQRTHSSSSRLSTCSSEVIDDSALYAYAINEVDSEFGAFKERVQN
                     RPPSSVIQEKGMNDELYDQLVEAMAEAENSKREAFEESIRRRKAEKDAIEAKIRARES
                     ENFYEEEYRRRREIEEMLEKNKEEHENICKKLNEAAEELRITLDEKSFLKSQIADFDH
                     KVRELEHKLFSSIELLQNYKKERDKLQIEYDDALRVVEELKKKQANEASSSSVYQLYT
                     EFDFSEVKDATQNFDPFFKIGESGYGTTFRGFIRHTEVAIKMFYSHNPQVPSVFQHEV
                     NILSKMRHPNLVTLIGACPDDRIIIYEYLSGCSLEDRLECKNNTPPLSWKNRIRIAAE
                     LCSVLLFLHSCGIVHGNLKPTNILLDTNFVTKLSDFRTFSSNNMSLYMDPEFLSTKEL
                     TSESDTYSFGVILLRLLTGKPALGLLNEVQLALNNENLKNVLDSTAGDWPFVQAQQLA
                     VLAMNCCDVVRKIRPDLATEVWRVLEPMCVSCGPSSFRLGSEGQCQVPNYFVCPIFQE
                     IMQDPVVSADGFTYEAEAIKGWLDSGHNTSPMTNLKLANSTLVPNHALRSAIQEWLQQ
                     S"
     misc_feature    121..573
                     /gene="LOC139842447"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
     misc_feature    1042..>1494
                     /gene="LOC139842447"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    1582..2304
                     /gene="LOC139842447"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1582..1593,1600..1602,1606..1608,1639..1641,
                     1645..1647,1732..1734,1774..1785,1921..1923,1933..1938,
                     1942..1944,1972..1977)
                     /gene="LOC139842447"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
     misc_feature    2362..2529
                     /gene="LOC139842447"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; Region: RING-Ubox_WDSUB1-like;
                     cd16655"
                     /db_xref="CDD:438317"
ORIGIN      
        1 atggaaagtg cacaaattgc gatacagacc attaggtatc ctgtagttga tacctcggag
       61 atcatcgaaa ttaaggatga tatcgttgag aaaacatgtc ctacggttgt caataataat
      121 aagatttatg tggcggtcgg aacaaaattg aaagagagtc aaccaactct gcagtgggcg
      181 atagagaatt caggaggtag acatcttcat gttcaccaac ctccagagaa gatccccttt
      241 agtaatctct ttttcgttgc cggtatcata aatacacacc aagttgtggc acaccataaa
      301 gcagagaagc aacatatgct aaagctttta aagaaatata atcagatatg tgagaagtca
      361 ggggtgtgtg cagaggtgca gtatattgaa atggaatcaa ttgagaaagg tattgttgaa
      421 ttcatatgta aacacaatgt gagaaatctt gttatgggag cagctgcaga cagacaatat
      481 tcaaggaaaa tggtagacct gaggtcgaag aaagcaatct acgtgtgtat gcaggccact
      541 gcttcctgcc agattcagtt tatatgcaaa ggaaacatca tcttcactag accaggcagg
      601 ttggatggac ttggcgtttc aagatcatct tcatcatcac taccggatac tacctccaat
      661 tctgaactga attcctcact gtcaagatct gttagtgaaa gacagaatac tatattacag
      721 gtcaacagtt cgactcgaga ctgccgcaaa gtcaactctg actttcgtag gactggaata
      781 accacctcat tgcgagattt caacgtcaac ttgactccaa ctagtaggtt ttcttcagga
      841 agtgctactg atttttggaa tgggatttca cagagaactc attcctcgag ttcacgattg
      901 tctacatgtt ctagtgaagt tatcgatgat tcagcattat atgcatatgc aataaacgaa
      961 gttgattcag aatttggtgc attcaaagag cgtgttcaaa atcggccacc ttccagcgtc
     1021 atacaggaaa aaggtatgaa tgatgagtta tatgatcaac ttgtagaagc catggctgag
     1081 gcagaaaatt cgaaacgtga ggcgtttgaa gagtcgatca ggcgcaggaa agcagaaaag
     1141 gacgccattg aggctaaaat cagggctaga gagtccgaaa acttctatga ggaagaatat
     1201 agacgaagga gagagattga agaaatgtta gaaaaaaaca aggaggaaca tgaaaatatt
     1261 tgtaaaaaat taaatgaagc agcagaagaa ctccgaatta cacttgacga aaaatcattt
     1321 ctcaaaagtc aaatcgcaga ctttgatcat aaggtgcggg agctggaaca caagttgttc
     1381 tcttctatcg agttgctgca gaactacaaa aaggaacgtg ataaattgca gatagaatat
     1441 gatgatgcac ttagagtcgt tgaggaattg aaaaagaagc aagcgaacga agcctcaagc
     1501 tcaagtgtgt atcagctcta caccgagttt gacttttcag aagtcaagga cgccactcag
     1561 aactttgacc cattttttaa aattggagaa agtggttatg gaacaacatt cagaggtttt
     1621 attcggcata ctgaagtggc cataaagatg ttctattcac ataacccgca agtaccctcc
     1681 gtatttcagc acgaagttaa tattttgagc aaaatgaggc acccaaatct tgtaacattg
     1741 ataggtgctt gtccagatga tcggataata atttacgagt atctatcagg atgtagcctt
     1801 gaagatcgac tcgaatgcaa gaacaatact ccccctttat catggaaaaa cagaatccgc
     1861 attgctgctg agttatgttc cgttcttctt tttcttcatt cttgtggcat tgttcatggt
     1921 aatttaaagc cgactaacat cctcctagac acaaacttcg ttaccaaatt aagcgacttt
     1981 cgaacattct caagcaacaa catgtctctt tatatggacc ctgaattcct ttctactaaa
     2041 gaattaactt cggagtcaga tacgtactct tttggcgtta tattattgag attattgacg
     2101 ggtaagcccg ctttggggtt actaaatgaa gtgcagttag cactgaataa tgaaaatttg
     2161 aagaatgtat tggattcgac agctggagac tggccgtttg tgcaggcaca acagctggct
     2221 gttctagcaa tgaactgctg tgacgtggtt cgaaaaatta ggcctgatct tgcgaccgag
     2281 gtctggaggg tgcttgaacc catgtgtgtt tcttgtggac cttcttcatt taggttgggt
     2341 tctgaaggac agtgtcaggt tccaaactac tttgtttgtc ccatctttca ggaaattatg
     2401 caggatccgg tggtttctgc ggatgggttt acttatgaag cagaggctat taaaggatgg
     2461 ttagacagtg gccataacac ctcacccatg accaacctta agttagccaa ctccaccctt
     2521 gttccaaacc acgctcttcg gtctgccatt caagaatggc tacagcagtc ataa
//
LOCUS       XM_071832586             642 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides U-box domain-containing
            protein 33-like (LOC139842448), mRNA.
ACCESSION   XM_071832586
VERSION     XM_071832586.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..642
                     /gene="LOC139842448"
                     /note="U-box domain-containing protein 33-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842448"
     CDS             1..642
                     /gene="LOC139842448"
                     /codon_start=1
                     /product="U-box domain-containing protein 33-like"
                     /protein_id="XP_071688687.1"
                     /db_xref="GeneID:139842448"
                     /translation="MYPLVDTSYIKDLSDNIAEETRPIVVEDKIYVAVGKDFKDSRLT
                     LQWVIENRGGSTIICILHVHQPSNKVPFGNISLLAGIMYAQQVSAYHKTERQAMLQLL
                     EKYNQICQKAGVVTEVHHIEADCIENGIVEYIVKNNVRSLVMGAAASKQFSKKMVNLK
                     SKKAIYVCFHAAASCEIQFICKRNFIFIRRKIRLKMSKKLDESKWKANNKELA"
     misc_feature    85..546
                     /gene="LOC139842448"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; Region: USP_STK_Ubox_N;
                     cd01989"
                     /db_xref="CDD:467493"
ORIGIN      
        1 atgtatcctc ttgttgacac ctcatatatc aaggatctta gtgataatat tgctgaggaa
       61 acgcgcccaa tagtcgttga agataagatt tacgtggcgg ttgggaaaga ttttaaagat
      121 agtcggttaa ctctgcagtg ggtgatagag aatcggggag gtagtacgat aatatgcata
      181 cttcatgtgc accaaccttc aaacaaggtc ccctttggta atatctcttt actcgcgggc
      241 attatgtatg cacaacaagt ttcagcatat cataaaaccg aaaggcaagc tatgctacaa
      301 cttcttgaga aatataatca gatttgccaa aaagcagggg tggttacaga ggtgcatcat
      361 attgaagcgg attgtattga aaatggtatt gttgaatata tagttaagaa taatgttaga
      421 agccttgtaa tgggagcagc tgcaagcaag caattttcaa agaaaatggt taacttgaag
      481 tccaaaaaag ccatctatgt atgttttcat gcagctgctt cttgtgaaat tcagtttata
      541 tgcaaacgaa atttcatttt cattaggcga aaaatacggt taaagatgag caaaaaatta
      601 gatgaatcta agtggaaagc caacaacaag gagttggcat ag
//
LOCUS       XM_071832587            1257 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842449), mRNA.
ACCESSION   XM_071832587
VERSION     XM_071832587.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1257
                     /gene="LOC139842449"
                     /note="uncharacterized LOC139842449; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842449"
     CDS             1..1257
                     /gene="LOC139842449"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688688.1"
                     /db_xref="GeneID:139842449"
                     /translation="MTQRFTFEALDKTLRDILGAKDDANRSKLFGGMPILLGGDFRKI
                     LPVIPKGKRQDIIQACINRSDLWQHCQLHTLSRIMHVNEYNSDGHHDTRKHAFNKWVL
                     DVGEGKVQARRKDGEDEPTWIKIPDEYIVISEKSPIETIVDTIFPDYTIRQEDEEYLR
                     ERAILMPWNDDADQINKHMFKKLNGATMTFKSTNEICKGSTDNIEQHHAYPVEFLNKL
                     NFPGVPPHKLKLKVGQPIMLLRNLSPSSGMCNGTHLIITEFQKFVLQARIITGSHVGK
                     SVIIPRIVLTSTQTKWPFVIQRIQFPVRPCYAMTINKSQGQSLKFVGLYLPKPVFSHG
                     QLYVALLRVTDPNGLKIVMVDDDDRTLKGHTRNVVYKETFFNLNHSCIKAVVMVRVIA
                     ELGSAMDPTVQNSHGNSNKSTTSPAL"
     misc_feature    <1..777
                     /gene="LOC139842449"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <919..1047
                     /gene="LOC139842449"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    946..948
                     /gene="LOC139842449"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atgactcaaa ggtttacttt cgaggcgtta gacaaaacct tgcgagacat tttgggggct
       61 aaggacgacg caaacaggtc gaagctattt gggggtatgc ctatcctatt aggaggagac
      121 ttccggaaaa tcctacccgt gataccaaaa ggcaagagac aagacattat tcaggcatgc
      181 atcaatagat cggatctatg gcaacactgc cagctgcata ccctttcccg catcatgcac
      241 gtcaacgaat acaattctga tggtcaccat gatacccgaa agcatgcctt caataaatgg
      301 gtgctggatg taggagaagg taaagttcaa gcaaggcgta aagatggaga ggacgaacca
      361 acgtggataa agattcccga tgaatacatt gtcatatccg aaaaatcacc cattgaaacc
      421 attgttgaca caatattccc agattacact ataagacaag aagatgaaga atatttgcgt
      481 gaacgcgcga tcttgatgcc ctggaatgat gacgcggacc agattaacaa acacatgttc
      541 aagaaactca acggtgcaac aatgacgttt aaaagcacta acgagatttg caagggttca
      601 acagacaaca tcgagcaaca ccacgcctac ccggtagaat tcttaaataa attaaatttc
      661 ccaggagtcc ctcctcacaa gcttaagcta aaagtaggcc agccaattat gctattacga
      721 aacctatccc cgagttcagg catgtgtaat ggaacgcacc taatcataac cgaattccaa
      781 aaatttgttc tccaggctag aataatcact ggctcccatg tagggaaatc agttatcata
      841 ccgagaattg tcctgacttc gacccaaaca aagtggccct ttgtcattca gcgaatacag
      901 tttccggtca gaccatgtta cgcaatgacg ataaacaaaa gccaagggca gtcgttaaaa
      961 tttgttggcc tttatctccc aaaacctgtc tttagccacg gtcaactgta tgtagccctt
     1021 ttaagagtca ctgacccgaa cggcctaaaa atagtaatgg tcgatgacga tgatcgaact
     1081 ttgaagggcc acacaagaaa tgttgtctac aaagaaacct tcttcaactt gaaccacagt
     1141 tgcattaagg ctgttgtcat ggtacgcgtc atagcagagc ttggatcagc tatggaccct
     1201 actgtacaga attcgcatgg aaactccaac aaatctacta cttcaccggc tctttag
//
LOCUS       XM_071832590             546 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842451), mRNA.
ACCESSION   XM_071832590
VERSION     XM_071832590.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..546
                     /gene="LOC139842451"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842451"
     CDS             1..546
                     /gene="LOC139842451"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688691.1"
                     /db_xref="GeneID:139842451"
                     /translation="MTNLGQLNFFLGISVTRIDSGMFLSKKKYKFEILERVDMLNYKP
                     FRTPVDIGYKLTSNGPHVANPTLYHSLAVHDSREPHLSALKRILRYVRGTLDLGLQLF
                     ASSLRADLYYTEWEHVTPVTMIPKSANELFAYIITTRHSTSGYCVFLSNNLSSWSSKR
                     QNTPSRSSAEYLSVANTVAKT"
     misc_feature    <1..147
                     /gene="LOC139842451"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    412..>534
                     /gene="LOC139842451"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgactaacc ttggccagtt gaacttcttt cttggcatat cggttactcg tattgattct
       61 gggatgtttc tctctaagaa aaagtacaaa tttgagatcc ttgagcgtgt tgatatgctt
      121 aattataaac cgttcagaac tcctgtagat attggttata agctcacttc taatggacct
      181 catgttgcga atccaacttt atatcacagc ttagcagtac atgattctcg cgagcctcat
      241 ctttcagctc tcaaacgaat tttacgctac gttcgaggca ctcttgatct tggtttacag
      301 ttgtttgcat cttcgctaag ggcggatcta tattataccg agtgggagca cgtgacaccc
      361 gtgactatga ttcctaaatc cgccaatgaa ttattcgctt acatcattac cactcgtcac
      421 tctacttctg gatactgtgt ttttcttagc aacaatttat cgtcatggtc ttcgaaacgc
      481 cagaatactc cttcacgttc tagtgcggaa taccttagtg ttgccaacac cgttgcgaaa
      541 acctag
//
LOCUS       XM_071832591             321 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842452), mRNA.
ACCESSION   XM_071832591
VERSION     XM_071832591.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..321
                     /gene="LOC139842452"
                     /note="uncharacterized LOC139842452; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842452"
     CDS             1..321
                     /gene="LOC139842452"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688692.1"
                     /db_xref="GeneID:139842452"
                     /translation="MLGSIDCMHWEWKNFPIAWQGQYTRGDKKVPSIMLEAVASQDLW
                     IWHGFFGMAGAKNDINVLNASPLFKSIKDGTALPSQFDVNVHHYDRGYYLGDGIYPEW
                     AMLV"
     misc_feature    1..>318
                     /gene="LOC139842452"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcttggta gtattgattg tatgcattgg gagtggaaga attttcctat tgcgtggcaa
       61 ggacaatata ctagaggtga taaaaaggta ccatccatta tgcttgaagc agtcgcctct
      121 caagatttgt ggatatggca tggattcttt ggtatggcag gtgcaaaaaa cgacattaac
      181 gttttaaatg cctcaccgtt gttcaaaagt ataaaggacg gcactgctct accttcacaa
      241 tttgatgtaa acgtgcatca ctacgataga gggtattacc taggtgatgg tatataccct
      301 gaatgggcta tgttggtctg a
//
LOCUS       XM_071832592             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139842453), mRNA.
ACCESSION   XM_071832592
VERSION     XM_071832592.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139842453"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139842453"
     CDS             1..570
                     /gene="LOC139842453"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071688693.1"
                     /db_xref="GeneID:139842453"
                     /translation="MTGSNNDINVLKQSPVFDKLKNGTTPPAPFEVNGNHYTKGYYLA
                     DGIYPDWATLIKGYAAPTDDPRIKFTRFQASVRKDVERAFGVLQGRFHILRLAAHTMS
                     VNKMRRVIDCCIILHNMVLEDQGFALSDWEEDFITEPIENRPERIPNRGRDQDVIIRE
                     IRDRTVHDQLTDDLVEHIWNLTPTFRTTN"
     misc_feature    <4..375
                     /gene="LOC139842453"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgacgggtt ccaacaatga tattaatgtt ctgaaacaat caccggtttt tgataaacta
       61 aagaacggaa caactccacc tgcaccgttt gaggtaaatg gtaatcatta cacaaaaggc
      121 tattacctcg ctgatggtat atatcctgac tgggctaccc taatcaaagg ttatgcggcg
      181 ccgacagatg acccaaggat taagtttacg cggtttcaag ctagtgtccg aaaggatgtt
      241 gagagggcat ttggggttct tcaaggtcga tttcatattt taaggttagc ggcacacact
      301 atgtcggtga acaaaatgcg aagagttata gattgttgta tcatattaca taatatggtt
      361 ttagaagatc aaggatttgc gttaagtgat tgggaggaag atttcattac cgaaccgata
      421 gagaatcgtc cagagcgtat accgaatagg ggacgagatc aagacgttat catccgagag
      481 attagagata ggacggtgca cgatcaacta accgatgatc ttgttgagca tatttggaac
      541 cttacgccca catttcgcac tacgaactaa
//
LOCUS       XM_071832593             975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842454), mRNA.
ACCESSION   XM_071832593
VERSION     XM_071832593.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..975
                     /gene="LOC139842454"
                     /note="uncharacterized LOC139842454; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842454"
     CDS             1..975
                     /gene="LOC139842454"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688694.1"
                     /db_xref="GeneID:139842454"
                     /translation="MSDAGSTKISDLEFNDPLYLHPSDTSGASLITHKLKGTENYNVW
                     SCAIKLALQTKNKLGFIDGSCPRFQYEDDDVLLSQWDRCNSVVLSWILVSLTEEVYNG
                     QIFSKTAEVVWTELKETYDKVDASVTFNLYQQINSCSQNGQSLSDYYHKLNAMWRQFD
                     EMVKIDDIVKASKSYQDHNQFLKLMQFLMGLDSVYTTVRSQILTTDPVPNVKTAFSII
                     SRDESHRLHTPNGNNIKGQTNAFVGKVGNTGNTNNSFNKKKYRNPPLKCTNCNMLGHT
                     VDRCYELIGYPPGYIKKPFNQGSPRFNSNNCVTDKSEGCSSSVQLASD"
     misc_feature    61..198
                     /gene="LOC139842454"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    262..675
                     /gene="LOC139842454"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgagtgatg ctggtagtac taagataagt gatcttgaat ttaatgaccc tttatatctg
       61 cacccaagtg acacctctgg tgcctctttg attacacata aacttaaagg aactgaaaat
      121 tataatgtgt ggagttgtgc tataaaactg gctttacaaa ctaaaaacaa attagggttc
      181 atagatggtt cttgtcctag atttcaatat gaagatgatg atgttttgtt aagccaatgg
      241 gataggtgta actcagtggt tctctcttgg attcttgtat ctttaactga agaagtttat
      301 aatggacaaa ttttttctaa aactgcagaa gttgtttgga ctgagttaaa agaaacttat
      361 gataaagtag atgcttctgt tacatttaat ttgtatcaac aaattaattc ttgtagtcaa
      421 aatggtcaat ccttatcaga ctactaccac aagctcaatg ctatgtggag acaatttgat
      481 gagatggtca agattgatga tattgttaag gcctctaagt cttatcaaga tcacaatcaa
      541 tttttgaaat tgatgcaatt tcttatgggt cttgacagtg tttatacaac tgttagaagt
      601 cagattttaa ccacagatcc tgttcctaat gtcaaaacag ctttttcaat aatctcaagg
      661 gatgaatcac ataggttaca cacacctaat ggtaataata taaaaggtca aactaatgct
      721 tttgtgggaa aggtgggtaa tactggtaat acaaataatt cttttaataa gaaaaagtat
      781 agaaatccac ctttaaagtg cacaaattgt aatatgttgg gccatactgt tgatagatgt
      841 tatgagttaa taggataccc tccaggctat ataaagaaac catttaatca agggtcacct
      901 agatttaata gcaataactg tgttactgac aagagtgaag gttgtagttc ttctgttcaa
      961 ctcgctagtg attaa
//
LOCUS       XM_071832594            1173 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842455), mRNA.
ACCESSION   XM_071832594
VERSION     XM_071832594.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1173
                     /gene="LOC139842455"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139842455"
     CDS             1..1173
                     /gene="LOC139842455"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688695.1"
                     /db_xref="GeneID:139842455"
                     /translation="MTLPEEFFSKDDKRVCKLVKSLYGLKQAPRKWNEKFCDALYEYG
                     FVKSVNDYSLFVKFTSNACIYLLVYVDDIVITGSSLKDIQDCKTYLSTKFKIKDLGNL
                     EYFLGIELVNNDSGVCLSQRKYILEVISEFGMLTNKPVATPMESGIVFANLHEHSRYD
                     YLLDNISEYQKLVGKLIYIALTRPDIAYTVHCLSQHMHSPLASHLKAAMRILKYLRET
                     PGKGIFLSKYDRYDLSAFVDSDYGKCSFSRKSVTGFCVFLGKSLISWKSKKQSTISRS
                     SAETEYRALAYVTCEIIWILKILKDLNVKTNLPVKIFRDYKSALQIAKNPVFHERTKH
                     FKIDLYFVRGKIEKGVIHTVQIDTSENISDILTKSLTGEQHKLFCEKLTLVDSYHV"
     misc_feature    <40..435
                     /gene="LOC139842455"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    703..1119
                     /gene="LOC139842455"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(712..723,826..834,841..843,943..945,1021..1023,
                     1102..1104)
                     /gene="LOC139842455"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaccttac ctgaagaatt ttttagtaaa gatgacaaaa gagtgtgcaa attggttaag
       61 tctttgtatg gcttgaaaca agcaccaaga aaatggaatg aaaaattttg tgatgctctt
      121 tatgaatatg gttttgttaa aagtgttaat gactactctc tgtttgtgaa atttactagt
      181 aatgcatgca tatatctatt agtatatgtg gatgatattg ttattactgg aagtagtttg
      241 aaagatattc aagattgtaa aacttatttg agcacaaaat ttaaaatcaa agacttagga
      301 aatttggaat atttcttggg aattgaatta gttaataatg actctggtgt ttgtttgtca
      361 caaagaaaat atattttaga ggtcatatct gaatttggta tgttaactaa taaacctgtt
      421 gcaacaccta tggaaagtgg tattgtcttt gctaatttac atgagcatag taggtatgat
      481 tacttgcttg acaatattag tgaatatcaa aagttagtag gaaagttaat atacattgct
      541 ttaactagac ctgatattgc atatactgta cactgtctga gtcaacacat gcattctcct
      601 ttggcatcac atctaaaagc tgctatgaga attttgaaat atttaagaga aactcctggt
      661 aaaggtatct ttttaagtaa gtatgatagg tatgatcttt ctgcctttgt tgattcagat
      721 tatggaaaat gcagtttttc aagaaaatct gtaacagggt tttgtgtatt tcttggaaaa
      781 tctttaattt cttggaagtc aaagaaacag tcaacaattt caagatcttc agctgaaact
      841 gagtacagag ccttagctta tgtaacttgt gaaataatct ggattttgaa aattttaaaa
      901 gatttgaatg taaaaacaaa tttacctgtt aaaattttcc gtgattacaa atctgcacta
      961 cagatagcaa aaaaccctgt ttttcatgaa agaacaaagc attttaagat tgatttgtat
     1021 tttgtaaggg gaaaaattga aaagggtgtt attcatacag ttcaaattga tacttctgaa
     1081 aatatttctg atattcttac aaagagtttg actggtgaac aacataaact attttgtgaa
     1141 aaattaacat tggttgatag ttaccatgtt tag
//
LOCUS       XM_071832595             486 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative ripening-related
            protein 2 (LOC139842458), mRNA.
ACCESSION   XM_071832595
VERSION     XM_071832595.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..486
                     /gene="LOC139842458"
                     /note="putative ripening-related protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842458"
     CDS             1..486
                     /gene="LOC139842458"
                     /codon_start=1
                     /product="putative ripening-related protein 2"
                     /protein_id="XP_071688696.1"
                     /db_xref="GeneID:139842458"
                     /translation="MKQSTIILLVIFSLLITLLTTYVEGQKHGRKLIRKTLTPYQLVT
                     SFDHDIHASSNELGATLMITDFEQGGESGGPAECDGVYNSSDLFLVSLSTDWYNNGQS
                     CYKGVRINYSGNNAIALGIDECGDGCPDGTVVASEPVWRALQIPESEWGEAEVTWSFV
                     D"
     misc_feature    175..477
                     /gene="LOC139842458"
                     /note="double-psi beta-barrel fold of RlpA, N-terminal
                     domain of expansins, and similar domains; Region:
                     DPBB_RlpA_EXP_N-like; cl41724"
                     /db_xref="CDD:455124"
ORIGIN      
        1 atgaagcaat ccactataat ccttctcgtt atcttttctc tactcattac attgctcacc
       61 acctacgtcg aaggtcaaaa acatggtcga aagttaatac gaaaaacctt aactccatat
      121 caacttgtaa ccagttttga tcatgacatt cacgcgtcta gcaatgaact tggggcaact
      181 ttgatgatca ctgatttcga acaaggtgga gaaagtggag ggccggctga gtgtgacggc
      241 gtgtataatt caagtgactt gtttctggtg tcgttatcca cggactggta caacaatggg
      301 caaagttgtt ataagggcgt aagaataaat tacagtggta ataatgccat agcgttaggg
      361 attgacgagt gtggtgatgg gtgtcctgat ggtactgtgg tcgcgtctga gccagtttgg
      421 cgggctcttc aaatacctga aagtgaatgg ggcgaagctg aagttacttg gtcatttgtt
      481 gattga
//
LOCUS       XM_071832596             453 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative ripening-related
            protein 2 (LOC139842459), mRNA.
ACCESSION   XM_071832596
VERSION     XM_071832596.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..453
                     /gene="LOC139842459"
                     /note="putative ripening-related protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842459"
     CDS             1..453
                     /gene="LOC139842459"
                     /codon_start=1
                     /product="putative ripening-related protein 2"
                     /protein_id="XP_071688697.1"
                     /db_xref="GeneID:139842459"
                     /translation="MKQSTLIIFLVIFSLLFTLHTARVNNQSKHGRKLMSKHSIHSAI
                     GVQENLMITDYTKGGDSGGPAECDGKYHSNDKFLVSLPTTWYNDGKNCNKGINISYKG
                     MDVIAVVIDECGGCSDDVLVASKAVWRGLHVPESQWGDEIQVIWSYVN"
     misc_feature    148..441
                     /gene="LOC139842459"
                     /note="double-psi beta-barrel fold of RlpA, N-terminal
                     domain of expansins, and similar domains; Region:
                     DPBB_RlpA_EXP_N-like; cl41724"
                     /db_xref="CDD:455124"
ORIGIN      
        1 atgaagcaat ctactcttat aatctttctc gttatctttt ctctactttt cacattgcat
       61 accgcccgcg tcaataatca gtccaaacac ggtcgtaagt tgatgagtaa acactcaatc
      121 cattcggcca ttggtgtaca agagaattta atgatcactg attataccaa gggtggagac
      181 agtggagggc cggctgagtg cgatggtaag taccactcaa atgataaatt tctagtgtca
      241 ttgcccacta cgtggtacaa tgatggtaaa aattgcaata agggcattaa tataagttac
      301 aaaggtatgg atgtaatagc ggtggtaatc gacgagtgtg gtgggtgttc ggatgatgtt
      361 ttggttgcgt ctaaagcagt ttggcgtggt cttcatgtgc ctgaaagtca atggggggat
      421 gaaatacaag ttatttggtc atatgttaat tga
//
LOCUS       XM_071832598             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative ripening-related
            protein 1 (LOC139842460), mRNA.
ACCESSION   XM_071832598
VERSION     XM_071832598.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139842460"
                     /note="putative ripening-related protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139842460"
     CDS             1..462
                     /gene="LOC139842460"
                     /codon_start=1
                     /product="putative ripening-related protein 1"
                     /protein_id="XP_071688699.1"
                     /db_xref="GeneID:139842460"
                     /translation="MKQSTSTIFCIIFSLLITLLNARVVRKNATQEQLVIKHSIRASV
                     STGATLMITDYEKGGDSGQPAKCDGVYQSNNLFLVSLPSTWYKHGDNCYKGVNISYNN
                     VNVIALAVDECDSGDGCSDDDLVASNAVWRGLQVPESQWGVGIQVIWLFVN"
     misc_feature    133..447
                     /gene="LOC139842460"
                     /note="double-psi beta-barrel fold of RlpA, N-terminal
                     domain of expansins, and similar domains; Region:
                     DPBB_RlpA_EXP_N-like; cl41724"
                     /db_xref="CDD:455124"
ORIGIN      
        1 atgaaacaat ctactagtac gatcttttgc attatctttt ctctacttat cacattactt
       61 aatgcacgtg tcgtgagaaa aaatgcgact caagagcaac ttgtgattaa acactcaatc
      121 cgtgcgtctg tcagtacagg ggcgacttta atgatcaccg attatgagaa gggtggagac
      181 agtggacagc cggctaagtg tgacggtgtg tatcaatcaa ataatttgtt tctggtgtca
      241 ttgcccagta cgtggtacaa acacggggac aattgctata agggtgttaa tataagttac
      301 aacaatgtta atgtaatagc gttggcagtc gatgagtgcg actctggtga tgggtgttct
      361 gatgatgatt tggttgcatc taatgcagtt tggcggggcc ttcaggttcc tgaaagtcaa
      421 tggggggttg gaatacaagt tatttggtta ttcgtaaatt ga
//
LOCUS       XM_071832599             417 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842461), mRNA.
ACCESSION   XM_071832599
VERSION     XM_071832599.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..417
                     /gene="LOC139842461"
                     /note="uncharacterized LOC139842461; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139842461"
     CDS             1..417
                     /gene="LOC139842461"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688700.1"
                     /db_xref="GeneID:139842461"
                     /translation="MPPVLGVHLILTSLSKDYDGFVMNYNMHSMGKTIPELHAMLKQA
                     KKGLPKKTPAVLTIKEGKIQKIKPQPASGKGKGESKPAYTPKKKIPPPAKKEHPAKNM
                     ACHHCGQIGHWRRNYVLYLEELRANYVIYRLWYFGF"
ORIGIN      
        1 atgccaccag ttcttggagt gcacttgata cttacttcac tatccaagga ctatgatgga
       61 tttgtaatga attacaatat gcatagcatg ggaaaaacca ttcctgagct acatgcaatg
      121 cttaagcaag ctaaaaaggg gctaccaaag aagactccgg cagtcttaac cataaaggaa
      181 ggtaaaatcc agaaaataaa gccgcaacct gctagtggaa agggaaaagg agagagtaag
      241 ccagcttaca caccaaagaa gaaaattcca ccaccagcaa agaaagagca tcccgcaaag
      301 aacatggctt gtcaccattg tggccagatt ggtcattgga gacgaaacta tgtgctttac
      361 ttggaagagt tgagagccaa ttatgtaatt tacagattat ggtatttcgg tttctaa
//
LOCUS       XM_071832600             408 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative ripening-related
            protein 2 (LOC139842462), mRNA.
ACCESSION   XM_071832600
VERSION     XM_071832600.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..408
                     /gene="LOC139842462"
                     /note="putative ripening-related protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:139842462"
     CDS             1..408
                     /gene="LOC139842462"
                     /codon_start=1
                     /product="putative ripening-related protein 2"
                     /protein_id="XP_071688701.1"
                     /db_xref="GeneID:139842462"
                     /translation="MKQSIISFIILLFIFFYLFIFSINGHSTTRKATLTLNSFEKGGD
                     GGGPSECDGHYHSNKDPIVALSTRWYNHGHRCFKHIKINYRDRSVRAKVVDECDSTRG
                     CKDDIVDASIAVWRALKVPKSQWGETEVTWSDA"
     misc_feature    70..402
                     /gene="LOC139842462"
                     /note="double-psi beta-barrel fold of the kiwellin family;
                     Region: DPBB_kiwellin-like; cd22270"
                     /db_xref="CDD:439250"
     misc_feature    order(142..159,217..222,226..228,283..288,292..294)
                     /gene="LOC139842462"
                     /note="putative effector binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:439250"
ORIGIN      
        1 atgaagcaat caataattag cttcatcatt ctccttttca tcttttttta tttgttcata
       61 ttttcaatca atggtcactc aactactaga aaagcaactc taactctcaa tagttttgag
      121 aagggtgggg atggtggagg gccgtctgag tgtgacggcc actaccattc aaacaaagat
      181 cccatcgttg cgttgtctac acgatggtac aatcatggac ataggtgttt taagcacatc
      241 aagataaact atagagatag aagtgtaagg gctaaggtgg ttgacgagtg cgattcaact
      301 agagggtgca aagacgatat tgtggatgca tcgatagcgg tttggcgtgc acttaaagtg
      361 cctaaaagtc aatggggaga aaccgaagtt acttggtcag atgcttga
//
LOCUS       XM_071832601            2205 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842463), mRNA.
ACCESSION   XM_071832601
VERSION     XM_071832601.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2205
                     /gene="LOC139842463"
                     /note="uncharacterized LOC139842463; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins"
                     /db_xref="GeneID:139842463"
     CDS             1..2205
                     /gene="LOC139842463"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688702.1"
                     /db_xref="GeneID:139842463"
                     /translation="MPPKRKSASHFESTLPSVSAGGCSNFPPARKTGVVGSSFQLPSS
                     LDCPVMPEGVTGYYNDIGDCNCVCYFCGAYFWYEERVKSSSVLRFNGRCEGGRVDLPR
                     ERNPPPDIVELLKSRNYVDNIRAYNQMFSMASYGAQIDDTINNSRGPYVFKIVGQVYH
                     WIVAICPEDGDPPRFLQLYIYDTDNEVRNRLNIFGERRSGGVSEQVVELPLHILNDKN
                     EVVKLFRIARDRILGADVPEFQIRLYNVIGAKQYEMPVTDTLGAIVFKTGDRTRTDYD
                     LIVEYKGGTPKRVNKLHLMSGRGDHYRSDVGSQTILPASFTGGPRYLAKYNNITPSDR
                     ADILSRVFHLKINEYVIVLKVEDPFGLYRAILYTIEFQKRGLPHCHTLLWVQTSARSL
                     TPEDVDRFIAVELPNLNRDPVTFIVISDLMIHGPRGKVNEDAPCMQQHKCKKRFPKPF
                     NNTTYFDKDGFIHYRRRNTGISVDKTICHLDNGYVVPYKSYLCLRFHAHINVECCGWN
                     MLIKYLFKYISKGTDRVATHISRPLGDEGSSRRIENQAVDEIKNFIDARFICPHEASW
                     RIYNFPINYREPAVQVLITLEGKKTTLTEWLEYNKSPSDGRHLTYLDFPGKFVWVSNE
                     KRWKRRCNLNKPSIGRLSYMHPAFGEVFYLRMLLCHKKGCTSYTDLLTIGQTTYHTYR
                     ETCLAMGLLGDNKEWKTALEEASATATAAELRTLFSHILIYCDVANPLRLWK"
     misc_feature    <916..1149
                     /gene="LOC139842463"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgcctccta aacgaaagtc agcaagtcat tttgagtcta cattaccatc cgtgtccgct
       61 ggtgggtgct cgaattttcc tcctgctaga aaaacaggag ttgttggttc atcttttcag
      121 ctaccgtcct ctttagattg tcctgttatg cctgaagggg taactggata ttataatgat
      181 attggtgact gcaattgtgt atgctatttt tgtggagcgt atttttggta cgaagaacga
      241 gtaaaatctt caagtgtttt gcgtttcaat ggtcgttgtg aaggtggtcg tgtagatcta
      301 cctagagaaa ggaatcctcc acctgacatc gtcgagttat taaaaagtag gaattacgtg
      361 gataatatac gtgcgtacaa tcagatgttc agcatggcat cttatggtgc tcaaatagat
      421 gacaccatca acaacagtag aggcccttac gtgtttaaaa ttgtgggtca ggtttatcat
      481 tggatagtag cgatttgtcc tgaggatggt gatcctccac gcttcttaca actctacatt
      541 tatgataccg ataacgaggt acgtaatagg ttaaatattt ttggcgaacg aaggtccggt
      601 ggtgtttctg aacaggttgt tgaattacca ttgcatattt taaacgataa aaatgaagtg
      661 gtcaaacttt ttaggattgc tagagataga attctcgggg cggatgtacc tgaattccaa
      721 ataagattgt ataacgtaat tggggctaag caatatgaaa tgccggtaac tgataccctt
      781 ggtgcaattg ttttcaaaac gggagacagg acccgaactg attatgatct tattgtagaa
      841 tataagggtg gtacaccaaa acgtgttaat aagttacatt taatgtctgg gagaggcgac
      901 cattacaggt ctgatgtcgg tagtcaaact atattacccg cttcttttac tggtgggcct
      961 cggtatcttg caaagtataa caacataact ccgagtgata gagctgatat actttccagg
     1021 gtctttcatt tgaaaataaa tgaatatgtt attgtgttga aggtagagga cccttttggc
     1081 ctctatagag caatattgta caccatcgag tttcaaaaga gaggactacc gcattgtcat
     1141 acactattgt gggtgcagac ttctgctaga tctttaacac ctgaagatgt tgacagattc
     1201 atagcagttg aattaccaaa cctcaataga gatccagtga cattcatagt tatctcggat
     1261 cttatgatac atggcccgcg tggaaaagtt aatgaagatg ctccatgtat gcaacaacac
     1321 aaatgtaaaa aaagatttcc aaagcctttt aacaacacaa cttattttga caaagatggc
     1381 tttatacatt atcggcgacg caatactgga atttcagtcg acaaaacgat ttgtcacctc
     1441 gataatggat acgtcgtccc ttacaaaagc tatttgtgtc ttcgtttcca tgcacatatc
     1501 aatgtagagt gttgcgggtg gaatatgctt ataaaatatt tgtttaagta tatttcgaag
     1561 ggtacagatc gcgttgctac acatatttca agaccgttgg gagatgaagg tagctccaga
     1621 agaattgaga accaggcggt agacgagatt aaaaacttca tcgatgccag atttatatgt
     1681 cctcatgagg catcctggag gatctataat ttcccaatta attatagaga accagcagtt
     1741 caagttctca ttaccctgga agggaaaaaa acaacactga ctgaatggtt agaatacaat
     1801 aaatcgccat ctgacggaag acatttaact tacctcgatt tcccaggcaa atttgtatgg
     1861 gtttccaacg aaaaaagatg gaagagaaga tgcaatctta acaaaccatc aataggccga
     1921 ttgtcgtata tgcatccagc atttggagaa gtcttctatc taagaatgct attgtgtcat
     1981 aaaaagggtt gtacatcata cacagatcta ctgacaattg gtcaaacaac atatcacaca
     2041 taccgtgaaa catgtcttgc aatgggcctt ctcggtgaca ataaggagtg gaaaacggca
     2101 ctcgaggagg caagtgcaac agccaccgct gctgaattgc gtacactgtt tagtcatatc
     2161 cttatctact gtgacgtcgc aaaccctttg agattatgga agtaa
//
LOCUS       XM_071832602            2679 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842464), mRNA.
ACCESSION   XM_071832602
VERSION     XM_071832602.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2679
                     /gene="LOC139842464"
                     /note="uncharacterized LOC139842464; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842464"
     CDS             1..2679
                     /gene="LOC139842464"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688703.1"
                     /db_xref="GeneID:139842464"
                     /translation="MQSRASRFNDFIARNKLIEIPITGRKFTRISDDGVKFSKLDRFL
                     VNDSFIGLWKDLSVHPLDRGVSDHCPLILRDKYIDYGPKPFKIFNEWFKCDGVDEIVN
                     KACSKPVRSKRLDCMFRDKLKNVKFDLREWSKKVYGNLDYEINVLKIKVEEWEKKAEC
                     GDLNEHYQNSKFFHASIKRKLSKSNIRGLNINGSWNENPCDVKDAIRSHFQRIFESRN
                     CDRPFFAEWVVEYSDQTASMGPDGPASYRPNTAAAVDGLSHASGPVNRPDPVSGSARE
                     SVRASRSASNRGFVHVGPKLLQLYESEATTLELPFCEKEIWDAINDCGGTKAPGPDGF
                     NLSFYKKYWDVLKEDLVSAFHRFWILAKVLSNRLRKVIPTLVGFEQSAFIKGRNILDG
                     VLIANETIDFIKKSKAKCLIFKVDFEKAFDSLSWDFLMEVMGFMGFGLKWRQWILSCL
                     KSATISILVNGSPTSEFNLGRGVRQGDPLYPFLYILAAEGLNTLTKSAVNNNLFSGVM
                     IGKDKVCISHLQYADDTIYFGEWNPHNIRNLMKLLKCFEHTSGLNVNYQKSMLFGLGV
                     EYHEIEAMAKCFKCKIGSLPFNYLGLPIGANMKKLCSWKPVIDKFEKRLSDWKARMVS
                     FGGRATLVKSVLNSLPFSTWANIIKVGANLQDIGVTFSNSFVKVIGNGSGTSFWHDTW
                     VGDTPFSCKFKRLFKLEANPNVTVADRWVRNEVGWEGNWDWVRSPSRRTELELEDLKE
                     LLRDCVLIMDKCDSWRWESSTNSLFSTKRLTSIIDSKLFSVGSNVIESLQNNLVPKKV
                     ELFVWRSRRKHIPTLIELDKRGIDLHSVRCPLCDDGVESIDHALFFCKHAFEVWEKVF
                     KWWGINLFSSASLCEILQGTSNVSMTEPGLKIWQAI"
     misc_feature    1075..1782
                     /gene="LOC139842464"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1246..1263,1423..1428,1561..1563,1567..1572,
                     1768..1773)
                     /gene="LOC139842464"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1246..1263,1423..1425,1567..1569)
                     /gene="LOC139842464"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1426..1428
                     /gene="LOC139842464"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <2371..2553
                     /gene="LOC139842464"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcagagca gagcttctag attcaatgat tttatcgcaa gaaacaaatt gattgaaatc
       61 ccgatcaccg gtaggaagtt tacaaggatt agtgatgatg gggtaaagtt tagtaaactt
      121 gacaggtttt tggttaatga tagctttatt gggttatgga aggacctctc cgtccatcca
      181 ctcgatagag gtgtctccga tcattgtcca cttattctcc gtgataaata tattgattat
      241 ggtcctaaac ctttcaaaat ctttaatgaa tggttcaaat gcgacggggt ggatgagatt
      301 gtcaataaag cttgttcaaa accggttagg agcaagagat tagattgcat gtttagagat
      361 aaacttaaaa atgtcaagtt cgatcttcgt gagtggagca aaaaggtgta tggtaatctt
      421 gattatgaaa taaacgttct taagattaaa gttgaggagt gggaaaagaa ggccgagtgt
      481 ggtgatctaa atgagcatta tcagaactca aaattttttc acgcttccat caaaagaaag
      541 cttagcaaga gcaacattcg tggactaaac atcaatggaa gttggaacga aaacccgtgt
      601 gatgttaaag atgcaattcg ctctcacttc caacgtatct tcgaatcaag aaactgtgat
      661 aggcctttct ttgctgaatg ggttgtcgaa tactctgacc aaacagcctc catgggtcct
      721 gatgggcctg ctagctatcg gcccaacact gctgctgctg tcgatgggct ttctcacgca
      781 tctgggcctg tgaacaggcc tgatcctgtc tctgggtcag cccgtgaatc tgtaagggcc
      841 tccaggtctg ctagtaaccg tggttttgtt catgttgggc cgaaactgct ccaattatat
      901 gagtcagaag ccactacact cgagctaccg ttttgtgaga aagagatttg ggacgctata
      961 aatgattgtg ggggtacaaa agcccccggg ccggacgggt tcaatctaag tttctacaaa
     1021 aaatattggg acgtcttaaa agaggattta gttagtgctt tccatcgttt ttggatattg
     1081 gccaaggtgc tttcgaaccg tcttaggaaa gtcatcccga ctcttgtggg ttttgaacaa
     1141 agtgcgttta tcaaaggacg aaacatctta gatggcgtgc ttattgctaa tgagacgatc
     1201 gacttcatta agaaatcaaa agctaagtgt ctcatcttta aagtggactt tgagaaagct
     1261 ttcgatagtt tgagttggga ttttctaatg gaagttatgg gcttcatggg gtttggattg
     1321 aaatggcggc aatggatcct ctcttgtcta aaatccgcca cgatctctat tcttgtcaac
     1381 gggtctccca caagtgaatt taatcttgga agaggcgtca ggcaaggcga ccccctttat
     1441 ccttttcttt atattcttgc agccgaaggt ttaaacacgt taacgaagtc tgcggttaat
     1501 aacaatcttt tctcgggcgt gatgattggt aaggacaagg tatgcatctc acacctacaa
     1561 tatgcagatg atacgatata ctttggcgaa tggaaccctc acaacattcg caaccttatg
     1621 aagcttctta agtgttttga gcacacctcg ggtcttaatg ttaattatca aaaaagtatg
     1681 ttattcggtt taggtgtgga gtatcatgag attgaagcta tggctaagtg ttttaagtgt
     1741 aaaattggct cacttccttt taattatctc gggttaccaa ttggtgcgaa catgaaaaaa
     1801 ttgtgtagtt ggaagccggt tatcgataag tttgaaaaac gtctttcgga ttggaaggca
     1861 cgtatggttt cgtttggtgg tcgtgcgact cttgttaaat cggtgctcaa tagtctcccg
     1921 ttttccactt gggcgaatat catcaaagta ggtgcgaatc ttcaagatat tggtgttacc
     1981 ttttcaaact cgtttgtaaa agtcatcggg aatggttcgg gcacttcatt ttggcatgat
     2041 acatgggtcg gcgacacacc ctttagttgc aaattcaaga ggcttttcaa attagaggca
     2101 aatcctaatg taacggttgc ggatcgttgg gttcggaacg aagtagggtg ggaaggtaat
     2161 tgggattggg tgcggtctcc tagtagacgg acagagttgg agctcgagga tctaaaggaa
     2221 ttgcttcggg attgtgtact tataatggac aaatgtgatt cttggcgttg ggagagttcg
     2281 actaacagtc tcttctcaac aaaaaggctc acctctatca ttgattcgaa attgttttcc
     2341 gtgggttcta atgtgattga atctttacaa aataatttgg ttccaaagaa ggttgaatta
     2401 tttgtttgga ggtcgagaag aaagcatatt ccaacgctaa tcgagctaga taaacgtggg
     2461 attgacctcc actcggttcg ttgccctctt tgcgacgatg gagtggaatc aattgaccat
     2521 gccttatttt tttgtaaaca tgcgttcgag gtgtgggaaa aagtgttcaa atggtggggt
     2581 ataaatcttt tctcttcggc gagtctatgc gaaattcttc aagggacttc aaacgtatcg
     2641 atgacggagc cgggtctcaa gatttggcaa gcgatatag
//
LOCUS       XM_071832603             969 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842465), mRNA.
ACCESSION   XM_071832603
VERSION     XM_071832603.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..969
                     /gene="LOC139842465"
                     /note="uncharacterized LOC139842465; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842465"
     CDS             1..969
                     /gene="LOC139842465"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688704.1"
                     /db_xref="GeneID:139842465"
                     /translation="MKKKVLIIGGNGYLGQHLLQSLSESQKSVEDELLISFTYHSVPP
                     PQLLLQSFPKAIPFQVDLQTGQGFDSISHTFGQPDVVVNCAALSVPRACEAEPTVAMS
                     INVPSSLIKWLSSFGESNTLLIHLSTDQVYEGTKSFYKEDDKTHPVNVYGNSKVAAEE
                     YIFANWSNFAILRSSIIFGPQTISPVSKSLPIQWMDSVLANGQETTFFHDEFRCPIFV
                     KDVVNIIQVLADRWFSDGEKIQLVLNVGGPDRLSRVQMAEVVARVRGYNTSLIKPVSA
                     SSIDRGVKSPADISMDITKLVNNTLFLLEIKDLRTNVIPRSRDEIH"
     misc_feature    10..927
                     /gene="LOC139842465"
                     /note="dTDP-6-deoxy-L-lyxo-4-hexulose reductase and
                     related proteins, extended (e) SDRs; Region:
                     dTDP_HR_like_SDR_e; cd05254"
                     /db_xref="CDD:187564"
     misc_feature    order(25..27,31..42,112..117,178..189,250..258,262..264,
                     307..309,376..384,451..453,463..465,520..531)
                     /gene="LOC139842465"
                     /note="NADP binding site [chemical binding]; other site"
                     /db_xref="CDD:187564"
     misc_feature    order(310..312,382..384,451..453,463..465)
                     /gene="LOC139842465"
                     /note="active site"
                     /db_xref="CDD:187564"
     misc_feature    order(382..384,451..453,526..528,583..585,619..621,
                     637..639)
                     /gene="LOC139842465"
                     /note="putative substrate binding site [chemical binding];
                     other site"
                     /db_xref="CDD:187564"
ORIGIN      
        1 atgaagaaga aagtattgat aattggagga aatggttact tgggtcagca tctattacaa
       61 tctctatcag aatcccaaaa atctgtagaa gatgaattac taatctcctt cacatatcat
      121 tcagtacctc caccacaact attacttcaa tcttttccaa aagctatccc ttttcaagtt
      181 gatttacaaa ctggtcaagg ttttgactca atttctcaca catttggtca gcccgatgta
      241 gtggtcaatt gtgcggcact ttctgtacct cgtgcgtgtg aagcggagcc aacagttgcc
      301 atgtccataa atgttccttc ttcactcata aagtggttat caagtttcgg tgaaagcaat
      361 actcttctta ttcatctatc aaccgaccaa gtttatgaag ggacaaagtc tttctataaa
      421 gaagacgaca agacacatcc tgtgaacgtt tatgggaatt caaaagtggc agcagaagaa
      481 tatatctttg caaactggtc taactttgca attttaagaa gtagtatcat ttttgggcca
      541 caaaccatct caccagtctc aaaatcgtta ccaattcagt ggatggatag tgtcctcgcc
      601 aatggacaag aaaccacatt cttccatgat gaatttcgct gtccgatttt tgtcaaagat
      661 gttgtaaata tcatacaagt actagctgac agatggtttt cagatggtga gaaaattcaa
      721 ttggttctaa atgtgggtgg accagatagg ttatctcgtg ttcaaatggc tgaggtagtg
      781 gctcgtgtta gaggttacaa cacctcgtta atcaaaccag tgtctgcgtc atcgattgat
      841 cgtggagtca agtcccctgc cgacatatcc atggacataa ctaagctggt caataatact
      901 ttgtttttgt tagagataaa ggaccttaga acaaatgtta tacctagatc tagagatgaa
      961 attcactag
//
LOCUS       XM_071832604             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842466), mRNA.
ACCESSION   XM_071832604
VERSION     XM_071832604.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139842466"
                     /note="uncharacterized LOC139842466; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842466"
     CDS             1..837
                     /gene="LOC139842466"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688705.1"
                     /db_xref="GeneID:139842466"
                     /translation="MDISKYKAYRALQAAKKVVQGDYAKQYDYLRDYLEELSRSNPGT
                     TVRLLTEPCDDDVDKRKFMRCYVCLGPLKEGFRTLSRDLLGLDGAFMKEPATGQILSD
                     VGVDSNNGIYSLAYAILEGENYNSWSWFLECLRDDLDLTSMSNFTFISDRQKGLIHAV
                     ERIFPCVEHGFCLRHLHENMKTKNFRGLAYKQHLWNMRANDPKVPRPELWVNQVHHRK
                     RWFDTYQHAIIPLNGRDMWPKSNVTIPILPPKKIATAGRPKKSRRKGLLENDNIVEGG
                     KL"
     misc_feature    247..537
                     /gene="LOC139842466"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atggatattt ctaaatataa ggcttatagg gctctacaag ctgctaaaaa ggttgtgcag
       61 ggtgattatg caaaacagta tgattattta agagattatt tggaagaact tagtagaagt
      121 aaccctggta ctactgtgag attgttaact gagccatgtg atgatgatgt tgataaaagg
      181 aaatttatga gatgttatgt gtgcctggga ccattgaaag aaggctttag aactttatcc
      241 agagatttgc taggtttaga tggggcattc atgaaagaac cagcaacagg ccaaatctta
      301 agtgatgtgg gtgttgattc taacaatggt atttattcat tagcatatgc tatacttgag
      361 ggtgaaaact ataactcttg gagttggttt ttagaatgtc tgagggatga tttggattta
      421 acatcaatgt caaacttcac tttcataagt gatagacaaa agggacttat ccatgctgtt
      481 gagagaatat tcccatgtgt agagcacgga ttttgtttga gacatttaca tgaaaatatg
      541 aaaactaaga attttagagg attagcttac aagcaacacc tttggaatat gagagctaat
      601 gacccaaaag ttcctagacc agagttgtgg gtaaaccaag tacatcatag aaaaagatgg
      661 tttgacactt accaacatgc tattattcca ttgaatggaa gggatatgtg gccaaagtca
      721 aatgtgacaa taccaatcct cccacctaaa aagattgcta ctgcagggag gccaaagaag
      781 agtagaagaa agggattgct tgaaaatgat aatatagtgg aaggtggtaa gttataa
//
LOCUS       XM_071832605            1536 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            strictosidine-O-beta-D-glucosidase-like (LOC139842467), mRNA.
ACCESSION   XM_071832605
VERSION     XM_071832605.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 4% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-99                JBITNF010000004.1  505108372-505108470
            100-169             JBITNF010000004.1  505108578-505108647
            170-228             JBITNF010000004.1  505108786-505108844
            229-304             JBITNF010000004.1  505109367-505109442
            305-470             JBITNF010000004.1  505111063-505111228
            471-711             JBITNF010000004.1  505163446-505163686
            712-824             JBITNF010000004.1  505163758-505163870
            825-1069            JBITNF010000004.1  505170729-505170973
            1070-1104           JBITNF010000004.1  505171090-505171124
            1105-1131           JBITNF010000004.1  505171263-505171289
            1132-1213           JBITNF010000004.1  505171291-505171372
            1214-1322           JBITNF010000004.1  505171455-505171563
            1323-1536           JBITNF010000004.1  505171993-505172206
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1536
                     /gene="LOC139842467"
                     /note="strictosidine-O-beta-D-glucosidase-like; The
                     sequence of the model RefSeq transcript was modified
                     relative to its source genomic sequence to represent the
                     inferred CDS: deleted 1 base in 1 codon; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139842467"
     CDS             1..1536
                     /gene="LOC139842467"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN:
                     strictosidine-O-beta-D-glucosidase-like"
                     /protein_id="XP_071688706.1"
                     /db_xref="GeneID:139842467"
                     /translation="MVEFDRSCSNASDIKRIDFPDDFVFGVGSSAYQVEGSWRADGKG
                     LSIWDTFALRHPDKIEGGANGCHSNENYSRMKEDVQLLKKMGINSYRFSISWSRILPG
                     GKVSMGTSTEGINHYNKLIDELLANGIQPFVTLFHWDLPNALEEEYMGFLSSKIVDDF
                     VNYADICFWEFGDRVKNWVTINEPCEFTVSGYVAGRWAPGRGGDNEDGDPQTEPYTVA
                     YNLLNCHAAAYRKYCEGYKDIQKGKVGITLNSNYFQPYNGPSDVQAVKYAFDFQLGWF
                     LEPLTKGNWPESMLTFAQTPTSDYPNGRVLPTFSSDQLTKLINSYDFLGINYYTSNYA
                     RLPTSSDKLSLGYSTDCHYVASGQDPDGNNIGEPSYEGSWIYLCPQQLTELLVYIKET
                     YKVTTEIFITENGSSDENDAGKTYEQVRNDTYRMNYIKEHLKAIRNAREKQVNVMGYF
                     VWSFMDSFEWSAGYSVRFGLIYVDYLKDLQRYPKNSALWYKKFLYEDKKRSLTESENK
                     VRA"
     misc_feature    43..1482
                     /gene="LOC139842467"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     Region: BglB; COG2723"
                     /db_xref="CDD:442035"
ORIGIN      
        1 atggttgagt ttgatcgtag ttgcagcaat gcttctgata tcaaacgtat cgactttcca
       61 gatgatttcg tttttggcgt aggatcatct gcttatcagg ttgaaggtag ttggagggca
      121 gatgggaaag gtttaagtat ttgggatact ttcgctttgc gacaccctga taagattgaa
      181 ggaggtgcaa atggatgcca tagtaatgaa aattattcaa gaatgaagga agacgttcaa
      241 ttgttgaaga aaatgggtat caactcttat agattctcta tttcatggtc aagaatacta
      301 ccaggtggaa aggtgagcat gggtacatct acagaaggga tcaaccacta caacaagttg
      361 atagatgaat tactagctaa tgggattcag ccatttgtca ctttattcca ttgggatctt
      421 ccaaatgctt tagaagaaga gtacatgggt tttttgagtt ctaaaattgt ggatgatttt
      481 gttaactatg cggatatttg tttttgggag tttggagatc gggtgaagaa ctgggtgaca
      541 attaatgaac cgtgtgaatt caccgtcagc ggatatgtag ccggcagatg ggcaccaggt
      601 cgcggtggag acaacgaaga tggtgaccct caaactgaac catatacagt cgcatataac
      661 ttactcaatt gtcacgcagc cgcatataga aaatattgcg aaggctacaa ggatattcaa
      721 aagggaaaag tgggtatcac acttaatagc aactattttc aaccttataa tggtcctagt
      781 gatgttcaag ctgtcaaata cgctttcgac tttcagcttg gatggtttct ggagccgtta
      841 acgaaaggta attggccgga gagtatgctg acgttcgctc aaactccaac ttctgactat
      901 ccaaatggtc gcgttttgcc tacattttcc tcagatcaac ttacaaagtt gatcaattca
      961 tacgactttt tgggaataaa ctactacact tcgaattatg cccgattgcc tacttcttct
     1021 gataaacttt cacttggata ttctaccgac tgtcattatg tggcatcagg tcaagatcct
     1081 gatggaaata atattggaga gccgtcatat gaaggctcgt ggatttatct ttgtcctcaa
     1141 cagcttacag aactcttggt ttacatcaag gaaacgtata aagttactac agaaattttt
     1201 atcactgaga atggatcttc tgatgagaat gatgcaggaa aaacttatga acaagtgcgc
     1261 aatgatacgt atcggatgaa ttacatcaaa gagcatctaa aagcaattag aaatgcaaga
     1321 gagaagcaag taaacgtaat gggatacttc gtatggtcgt tcatggatag tttcgaatgg
     1381 tctgcaggat atagtgttag atttggtcta atctatgttg attacttgaa agatctacaa
     1441 aggtacccaa agaactcggc actttggtac aaaaagtttc tttatgaaga caaaaaaagg
     1501 agcctcaccg aaagcgaaaa caaagtcaga gcataa
//
LOCUS       XM_071832606            1194 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842469), mRNA.
ACCESSION   XM_071832606
VERSION     XM_071832606.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1194
                     /gene="LOC139842469"
                     /note="uncharacterized LOC139842469; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842469"
     CDS             1..1194
                     /gene="LOC139842469"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688707.1"
                     /db_xref="GeneID:139842469"
                     /translation="MGKRIELVDTFLKCNVDIGCVQETRWKGEGAVDIKDYRLWYPDS
                     RIARNGVGIFLGNLHKVNVVDVGRFSNMIMLVSLIIKEETFTIISTYAPHAGLSDAKK
                     KSFWELLDEVVRGCPADHRLIIGGDLNGHIGAEAEGYEGTHGGFGFGPRNEEGRSILE
                     FAIAHELVVANSFFKKRDAQLATFHSGGRRTQIDFFLLRKGELRTCRECKVLPALTCS
                     SQHRLLVMDLVTRGRVGRRARVVEHRILWKNLHGAKAETFRATVTDRLSVEGDNVAPT
                     DIDQIWNWMASTIREVAKEALGVALGTSRAHKSSRESWWLSDDVQMKVALKQTRFRKL
                     ITFGEGTPAERTRVEETYKEAKREVKKAVEIAKDKAYEDLYRKLDSKEGANDIYRIAK
                     AEVGA"
     misc_feature    4..684
                     /gene="LOC139842469"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(67..69,271..273,379..381,385..387,580..582,658..663)
                     /gene="LOC139842469"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(67..69,658..660)
                     /gene="LOC139842469"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(271..273,385..387,661..663)
                     /gene="LOC139842469"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atgggcaaga ggattgagct cgttgatacc ttccttaagt gtaatgtgga catagggtgt
       61 gttcaagaga ctagatggaa aggtgaaggg gcggtagata ttaaggacta taggttgtgg
      121 tacccggatt ctaggatagc acggaacggg gtaggtatct ttttgggaaa tctacataag
      181 gttaacgttg ttgacgtggg taggtttagc aatatgatta tgttggttag tctaattatt
      241 aaggaggaga ctttcacgat cattagcaca tatgcacctc atgcgggttt aagtgatgcg
      301 aaaaagaaga gtttttggga attgttagat gaggtagtga gggggtgccc agcggatcat
      361 cggctgatta tagggggtga tctgaatgga cacataggag cggaggcaga aggttacgag
      421 ggaacccatg ggggctttgg gtttggtcct agaaacgaag aagggcgctc aattcttgag
      481 tttgccattg cccacgagtt ggttgtagca aactctttct tcaagaagag ggatgctcag
      541 ttagccactt ttcatagcgg gggtcgtcgc acccaaattg acttttttct ccttcgtaaa
      601 ggggaactta ggacatgtag agaatgtaag gtccttccgg ccttgacgtg ctcctcccag
      661 catagattgt tggtcatgga cctagtcacc cggggaagag ttggcagaag ggccagggtt
      721 gtggaacata gaatcctttg gaagaatcta catggagcga aggcagagac ttttagagcg
      781 accgtgactg atagattgag tgtagaaggg gataacgtag cccctactga catagaccag
      841 atatggaact ggatggcgtc cactatcaga gaggtggcaa aagaagcttt aggggtggca
      901 ttagggacgt cgagagccca taagagtagt agagagtcat ggtggcttag tgacgatgtc
      961 caaatgaaag tcgcgttaaa gcagacgagg tttaggaagc tcattacttt tggggaaggg
     1021 acacctgcag agagaactag ggtagaagaa acatataaag aagctaaaag agaagtaaag
     1081 aaggccgtag aaattgcaaa agacaaagct tatgaagatt tatataggaa actagactct
     1141 aaagagggag ccaatgacat atatagaata gctaaagctg aggtaggggc ttag
//
LOCUS       XM_071832607            2425 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like protease
            SBT4.14 (LOC139842470), mRNA.
ACCESSION   XM_071832607
VERSION     XM_071832607.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2425
                     /gene="LOC139842470"
                     /note="subtilisin-like protease SBT4.14; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins"
                     /db_xref="GeneID:139842470"
     CDS             1..2220
                     /gene="LOC139842470"
                     /codon_start=1
                     /product="subtilisin-like protease SBT4.14"
                     /protein_id="XP_071688708.1"
                     /db_xref="GeneID:139842470"
                     /translation="MSRTLLLVHYFLILLIIGVNGETEDYYIIFLNNHSGSKEAKEST
                     HIDILSTLKESDLDAKESLVYSYTKSFNAFAAKLSDSEARKLSGMDGVQSIIKNQYRK
                     LHTTRSWDFIGFPQIVRRDKLESDIIIGVMDTGITPESESFNDDGFGPPPVKWKGSCP
                     HFANFSGCNNKLIGAKYFKLDGNPDPNDILSPVDTEGHGTHTSSTAAGSLVHNAELFG
                     LAKGTARGAVPSARVAMYKVCWASSGCSDMDLLAGFDAAIHDGVDIISISIGGLTGAY
                     TKDTISVASFHAMNKGILTVASAGNDGPNLGSVANHAPWILTVAASGIDRGFKSKIVL
                     GNGNTLSGTGINGFTPKQKFYPITSGNDVAINIESEESAGYCIEDTLDPSKVKGKLVQ
                     CKLGTWGSDSVITGLGGIGTIIESETFLDTAQIFMAPATMVNTTVGETINKYIHSTKS
                     PSAVIYKSEEVKISAPFVATFSSRGPNPGTKHVLKPDITAPGIDILASYTPLQTLTGL
                     KGDTQYSKFSIMSGTSMACPHVAGAAAYVKSFHPNWSPAAIKSAIMTSAKPMSSKVNQ
                     EAEFAYGVGQLNPTRAISPGLIYDMDTMSYVQFLCHEGYDGSSIASLIGSKTKIKCSS
                     LLPPLVSEDAINYPTMQLTLNRKKTITTAVFRRTVTNVGHAISTYNATVRAPKGVNIT
                     VEPMTISFTRALQTRSFKVTVTTNSKSCMKLLVSGSLIWRSCSHIVRSPIVVFNPQE"
     misc_feature    79..312
                     /gene="LOC139842470"
                     /note="Peptidase inhibitor I9; Region: Inhibitor_I9;
                     pfam05922"
                     /db_xref="CDD:428674"
     misc_feature    304..1671
                     /gene="LOC139842470"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; Region: Peptidases_S8_3; cd04852"
                     /db_xref="CDD:173795"
     misc_feature    order(397..399,592..594,748..750,805..807,901..903,
                     1570..1572)
                     /gene="LOC139842470"
                     /note="active site"
                     /db_xref="CDD:173795"
     misc_feature    order(397..399,592..594,1570..1572)
                     /gene="LOC139842470"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     misc_feature    994..1365
                     /gene="LOC139842470"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     Region: PA_subtilisin_like; cd02120"
                     /db_xref="CDD:239035"
     misc_feature    1255..1263
                     /gene="LOC139842470"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]; other site"
                     /db_xref="CDD:239035"
     misc_feature    1906..2202
                     /gene="LOC139842470"
                     /note="Fibronectin type-III domain; Region: fn3_6;
                     pfam17766"
                     /db_xref="CDD:465493"
ORIGIN      
        1 atgtcaagaa ccttacttct ggttcactat tttctaatat tgctcattat tggggttaat
       61 ggagaaaccg aggactatta cattatcttc ttgaataatc attctggtag taaggaagcc
      121 aaggaaagca cacacattga catcctatca acattgaaag aaagcgatct tgatgcaaag
      181 gaatctcttg tctatagcta tacgaaaagc tttaatgcat ttgcagctaa actctcggac
      241 tctgaagcac gaaagttatc tggaatggat ggtgtgcaat ctattatcaa gaatcaatac
      301 cgcaaactac atactacaag atcatgggat tttatcggat ttccacaaat cgtaagaagg
      361 gacaagcttg agagcgacat tattatcggt gttatggaca caggaataac accagaatcg
      421 gaaagtttta atgatgatgg ttttggccct ccacctgtta aatggaaagg atcttgtccc
      481 cattttgcta atttttctgg atgtaacaac aagcttatag gtgccaaata cttcaagcta
      541 gatggtaatc cagacccaaa tgacattcta tcaccagttg acaccgaggg gcatgggacc
      601 cacacatcat cgactgcagc aggaagtctg gtccataatg cagagctatt tgggttagcc
      661 aaaggaacag cacgtggggc cgtgccatcg gctagagttg caatgtacaa ggtctgttgg
      721 gctagctcgg gttgctctga catggacttg ttagccgggt tcgatgcagc cattcatgat
      781 ggagtcgata ttatatcaat ctcgataggt ggcttaacag gtgcctatac caaggatact
      841 atatctgtgg cctcgtttca cgcaatgaat aaagggattc ttactgtggc ttcagctggt
      901 aatgacgggc ctaatttagg cagtgttgcg aaccacgcac catggatctt gactgtggca
      961 gccagtggca ttgaccgagg gttcaagagt aaaatcgtgc tgggtaacgg gaatactttg
     1021 tcgggaactg gaataaatgg tttcactcca aagcaaaagt tttacccaat cacaagtgga
     1081 aatgatgtgg ccataaacat agagagcgaa gagagtgcag ggtactgtat tgaagacaca
     1141 ttggacccaa gtaaagtgaa agggaagctt gttcaatgca agctagggac ttggggttct
     1201 gattcagtta tcacaggact aggaggtatc gggacaatta tcgaaagtga aacgttttta
     1261 gataccgctc aaattttcat ggcaccagcg accatggtga atacgacagt tggtgaaact
     1321 atcaacaaat atattcactc tactaaatca ccgtctgcag tgatatacaa gtccgaagaa
     1381 gtgaagattt cggctccttt cgttgctaca ttttcatcga ggggtccgaa ccctggaaca
     1441 aaacatgtac tgaagccaga tattacagca ccaggaatcg acatattggc atcgtacacc
     1501 cctctacaaa cactaacagg cttaaaaggc gatacacagt attcgaaatt tagcatcatg
     1561 tcgggaactt cgatggcttg cccacacgtt gcaggtgctg ctgcctacgt taaatcgttc
     1621 catccaaatt ggtcccctgc tgcaataaag tcagccataa tgacttcagc aaaacctatg
     1681 agctcaaaag ttaaccaaga agctgagttc gcgtacggtg ttggtcaatt gaaccctaca
     1741 cgagcgataa gtccaggatt aatctacgat atggacacca tgtcgtacgt acagtttcta
     1801 tgccatgagg gatacgatgg atcatcaatc gcttctttaa ttggttcgaa aacgaagatc
     1861 aaatgtagtt cattacttcc acctttagta agtgaagatg ccataaacta ccctactatg
     1921 caacttacat taaacagaaa gaaaacaatc actacagcag ttttcagaag aaccgtgact
     1981 aacgtaggcc atgcgatatc aacatacaat gccaccgtta gagcacctaa aggagtgaac
     2041 ataacagtgg aaccaatgac aatctcgttc actcgtgcgt tacaaacaag aagctttaaa
     2101 gttacggtga caacaaattc gaaaagttgc atgaaacttt tggtttcggg atcgttgata
     2161 tggagaagtt gcagtcatat tgtgaggagt cccattgttg tttttaatcc acaagagtag
     2221 agttcagttc aggatacata caagtgttgg ttagcttata tgcttactca aactttataa
     2281 agacaataag ttcatttcta aatgcacatg atcagcttat caacttgaga ttatgcattc
     2341 aaataggcca tacttcaagt atcaagtata gtattataaa ccattacaaa atgatggtga
     2401 agattaaaaa aatgcacgaa ataga
//
LOCUS       XM_071832608             951 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842471), mRNA.
ACCESSION   XM_071832608
VERSION     XM_071832608.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..951
                     /gene="LOC139842471"
                     /note="uncharacterized LOC139842471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842471"
     CDS             1..951
                     /gene="LOC139842471"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688709.1"
                     /db_xref="GeneID:139842471"
                     /translation="MRLTSWNTRSLGNKSRGRLVGSLVNQFQVQFLVIQETMVKEVPQ
                     PVLNEIWKHYVFDFVQVEASGRSVRLLSIWNLESRKKLVWSHLKDITLKWSGSLCLLG
                     DFNAFTWEGPNEKFSRIDRMLVNVEWSILWPDAILQMSQTDKPDHKPIIWGNKLSYSG
                     PKPFRFNNSWFSIRGFFSFCETKWAKYLVNGWAAFIIAKKLQLLKADIKECITSCFEI
                     AYKRLTIRIDSKHRVQSRYNWLKLGNKNPRFFHLVSRIKQQSSHISRLKINGSWEEDP
                     CIVKEFAIDYFENLFTLPAHSLLVFDWVGLNLAHVPAHLH"
     misc_feature    1..453
                     /gene="LOC139842471"
                     /note="Metal-dependent hydrolase,
                     endonuclease/exonuclease/phosphatase family [General
                     function prediction only]; Region: ElsH; COG3568"
                     /db_xref="CDD:442789"
ORIGIN      
        1 atgaggctta cctcatggaa cacccgcagc ttaggtaata agtcaagagg tcgtttagtg
       61 ggatcgttag tcaatcagtt tcaagtacaa tttctagtaa ttcaagaaac tatggttaag
      121 gaagtacctc aacccgtact taacgagata tggaaacatt atgttttcga ttttgtccaa
      181 gtagaagcaa gtggaagatc ggttagactt ttatccattt ggaatcttga aagtaggaaa
      241 aagttagtgt ggtctcacct aaaggacatc actctcaaat ggtcgggttc tctttgtttg
      301 ttgggtgact ttaatgcatt tacttgggaa ggaccgaatg aaaagttttc acgtattgat
      361 cgaatgcttg ttaatgtcga gtggtctatt ctttggcccg atgcaatcct acaaatgagc
      421 caaacagata agcctgatca taagcccatt atatggggga ataaattaag ttattcgggt
      481 ccaaaaccat tcagattcaa caattcctgg ttctctattc gtggtttctt ctcgttctgt
      541 gaaacaaagt gggcaaaata tctagttaat ggatgggctg cttttattat tgctaagaaa
      601 ttacagcttc ttaaagcaga tattaaggag tgcatcacta gttgctttga aattgcttat
      661 aagaggttga caattcgcat cgattcaaaa cacagagttc aatcccgtta caattggtta
      721 aaattgggca ataaaaaccc tagattcttc caccttgttt ctcgaattaa gcaacaatca
      781 tctcatattt ccaggttaaa aatcaatggc tcttgggaag aagatccctg tatcgttaaa
      841 gagtttgcta ttgattactt tgaaaatctt tttacactgc ctgcacattc tcttttagtt
      901 tttgattggg tcggtttaaa tttggctcat gtaccggccc atttgcatta g
//
LOCUS       XM_071832609            1146 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842472), mRNA.
ACCESSION   XM_071832609
VERSION     XM_071832609.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1146
                     /gene="LOC139842472"
                     /note="uncharacterized LOC139842472; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842472"
     CDS             1..1146
                     /gene="LOC139842472"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688710.1"
                     /db_xref="GeneID:139842472"
                     /translation="MWETFKQVKINLPLIDTIKQVSSYANSLKDLCTQKRKQRATLPK
                     KVDLTEHLSVVVSGTLPPKFKDPGTPLIAVTVGNINVKKALLDLGASINILPFCLVDQ
                     FELGLMKRTDIIIQLADQSIKTPKGMLEDVIVKVEDFYCPVDFIVMDIEPRNRDAQPT
                     IILGLPFLATINAHINCRTGAMDISFENRKMRINIFNSLHAPYVHECYQVDIVDEQVE
                     KHASHLITNDVVEVFCLGDEDDVECEEVKAVELGIASTMDSRLPPWTHKYEPLPKSID
                     TNTKPSLESPPTLELKPLPSRLKYAFLGTNGTLPVIIASDLTGVQEKALMEVLHKYKA
                     VVGWTIADLKGISPSVCMHRIVTDLEVKHARDMRHRLNPNMQEVVKK"
     misc_feature    214..507
                     /gene="LOC139842472"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(259..261,265..267,271..273,343..351,484..486)
                     /gene="LOC139842472"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    259..267
                     /gene="LOC139842472"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    259..261
                     /gene="LOC139842472"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(343..354,364..375)
                     /gene="LOC139842472"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgtgggaaa catttaaaca ggttaagatt aatttgcccc ttatcgatac tattaagcaa
       61 gtctcgtcct acgctaactc tttgaaagac ctttgcactc aaaagaggaa gcaaagggcg
      121 actttaccca agaaggtgga cctaaccgag cacctaagtg tggttgtctc gggtacactc
      181 ccacctaagt ttaaggaccc agggactcca ttgatagcgg tgaccgtagg aaatataaat
      241 gtgaaaaagg cattattgga cctaggagct agcattaata tcttaccctt ttgcctagtt
      301 gaccaatttg aattaggatt gatgaaaaga actgacataa ttattcaact agcggaccaa
      361 tcaatcaaaa cgcctaaggg gatgttggaa gatgtgatag taaaagtgga ggatttctat
      421 tgcccggttg atttcatagt aatggatatt gaacctagga atagagatgc ccaacccacg
      481 ataatcttgg ggctcccgtt tttggccacc ataaatgccc atataaactg tagaacgggt
      541 gccatggata tatcatttga aaataggaaa atgaggatta atatctttaa ttctcttcat
      601 gccccatatg tccatgaatg ttatcaagta gacatagttg atgagcaagt ggaaaaacat
      661 gcttcccatt tgataacaaa tgatgtggtg gaagtatttt gcttaggtga tgaagatgat
      721 gttgagtgtg aggaagttaa ggcagttgag ttgggcatag caagtacaat ggactctagg
      781 ttaccacctt ggactcataa atatgagcca ttacctaagt ccatagacac caacacaaaa
      841 ccttcgttag agtcaccacc gacccttgag cttaaaccgt taccctctcg tttaaagtat
      901 gcattcttgg gtactaacgg cactttgcca gttattattg cttcagattt gacaggtgtg
      961 caggaaaaag ctttaatgga ggtgcttcat aagtacaagg ctgtggtggg atggactata
     1021 gcagatttga aagggataag tccctcagtg tgtatgcatc gtatagtgac agatctggag
     1081 gttaaacatg ctcgtgacat gcgacacagg ttaaacccga acatgcagga agttgtaaag
     1141 aaatag
//
LOCUS       XM_071832610            1305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calcium-dependent
            lipid-binding protein-like (LOC139842473), mRNA.
ACCESSION   XM_071832610
VERSION     XM_071832610.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1305
                     /gene="LOC139842473"
                     /note="calcium-dependent lipid-binding protein-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:139842473"
     CDS             1..1305
                     /gene="LOC139842473"
                     /codon_start=1
                     /product="calcium-dependent lipid-binding protein-like"
                     /protein_id="XP_071688711.1"
                     /db_xref="GeneID:139842473"
                     /translation="MGLISGMFMGALFGISVMAGWRYMMRCRSKNRAAKAADIKLLAS
                     LDRDDLMKLCGDSYPDWISFPVYEQVKWLNKQLSKLWPYVAEAAEIIIRDSVEPILEE
                     YRPSGISSLKFSKLTLGRVAPKIEGIRVQSQKQGQITMDMDFRWGGDPDIILGIEAGV
                     VSLPIQLKDLQVFTIVRVIFQLCDEIPCISAVVVALLSEPKPRFDYTLKAVGGSLTAI
                     PGLSDMIEDTVNSIITDMLQWPHRIVVPLGGVPVDTSDLELKPQGKLMLTIMKADHLK
                     NMEMMGKSDPYAVAFVRPLEKFRTKAIENNLNPVWNQTFHLTVEDKETQYAVIEVFDE
                     DIGADQQLGIAKLPLVDLEPEIEKEIQLRLQPSLDMLKIKDKKDRGTVTVKAKYRQFS
                     KEEQDAALAEEKRMLEQKEKMKNDGAINSTMDAIDDPKHVQG"
     misc_feature    175..741
                     /gene="LOC139842473"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain found in the synaptotagmin family,
                     mostly plants; Region: SMP_SYT; cd21677"
                     /db_xref="CDD:439233"
     misc_feature    order(250..252,259..264,274..276,286..288,352..354,
                     367..369,430..432,448..450,454..456,460..462,508..510,
                     514..516,526..528,532..534,574..576,580..582,586..588,
                     622..624,697..699,706..711,718..720,724..735)
                     /gene="LOC139842473"
                     /note="putative lipid binding site [chemical binding];
                     other site"
                     /db_xref="CDD:439233"
     misc_feature    793..1083
                     /gene="LOC139842473"
                     /note="C2 domain; Region: C2; cd00030"
                     /db_xref="CDD:175973"
ORIGIN      
        1 atgggattga tttctgggat gtttatgggt gctttatttg gtatttcagt tatggctggt
       61 tggcgttata tgatgagatg tcgaagcaaa aatcgtgcag ccaaggcagc tgatataaaa
      121 cttcttgcgt cgcttgatag ggacgattta atgaaacttt gtggcgatag ttatcctgac
      181 tggatatcat tccctgttta tgagcaggtg aaatggctta acaaacaact gagcaaacta
      241 tggccttatg ttgcagaagc tgctgaaatc ataattaggg attcggttga gcctatatta
      301 gaagagtatc gtccatcggg aatttcgtct ttgaagttca gtaaactgac gcttggacgc
      361 gtagcaccaa agattgaagg tattcgcgtt cagagccaaa agcagggtca aataacaatg
      421 gacatggatt ttcgatgggg tggtgatccg gatattattt taggaatcga agcaggtgtt
      481 gtctcattac cgattcagct gaaggatctt caagttttta ctattgttcg tgttatattt
      541 caactttgtg acgaaatccc ttgcatatca gctgttgttg tagctttact ttctgagcca
      601 aagccaagat ttgattatac attaaaggcg gttggaggaa gtttaacagc cattccagga
      661 ctttctgata tgattgaaga tactgtaaat tcaattatta ctgatatgct tcaatggcca
      721 catagaattg ttgttcccct tggaggtgta cctgtagata caagtgattt ggagctcaaa
      781 ccacaaggga agcttatgtt aacaataatg aaggcggatc atctaaagaa tatggaaatg
      841 atggggaagt ctgatcctta tgcggttgcg tttgttcgac cactcgaaaa attccgaaca
      901 aaagccattg aaaacaactt gaatcctgtt tggaatcaaa cgtttcatct caccgtggaa
      961 gacaaagaaa cccaatatgc tgtaattgag gttttcgacg aagatattgg agcagaccaa
     1021 caattgggca ttgctaaatt accattagtc gatcttgagc ctgaaatcga gaaagaaatt
     1081 cagttaaggc tgcaaccgtc acttgatatg ctcaaaatta aagataaaaa agatagagga
     1141 actgttacag ttaaggccaa gtatcgtcaa tttagtaaag aagaacaaga tgcagcatta
     1201 gccgaagaga aaaggatgct tgaacaaaaa gagaaaatga aaaacgatgg cgccattaat
     1261 agcaccatgg acgccattga tgatccaaaa cacgtccaag gatga
//
LOCUS       XM_071832611            1066 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842474), mRNA.
ACCESSION   XM_071832611
VERSION     XM_071832611.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1066
                     /gene="LOC139842474"
                     /note="uncharacterized LOC139842474; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842474"
     CDS             167..850
                     /gene="LOC139842474"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688712.1"
                     /db_xref="GeneID:139842474"
                     /translation="MGGKGKIRREKNYKEAHGVGKNRLPPPPVRSSLDVIPSKLRKLM
                     AYTSGSGKLSVDGEGSRSGHGGTCGGKSIQNKKLPSKEKSDSVAAESKIEDTHEQDTL
                     LSTEKKKKKRKRKQVDDLRFAAELGVTGSKRKERKKKLLEERKKKHKKVKEEDELNFP
                     GREEIKFGDVVQAPPKLVNVPKRFGSSMNASQERIRLRAIEAYRDQKKWASRPGVHLP
                     TTDLPPPQL"
ORIGIN      
        1 atgaatatcc atggccattc acatccctag ctgtcagtgg tcttttgtat agtttcgaat
       61 caaaccctga accaaaaacc cctctaaaga cggaagctaa aaccttcaca gcagcctaaa
      121 gtaccctaaa ctctaaaata caaaacaaca agatctcaat taattaatgg gtggcaaagg
      181 aaaaatcaga agagaaaaga attacaaaga agcccacggt gttggcaaaa accggttacc
      241 tccgccgccg gttcgttcat cactcgatgt cattccctct aagcttcgaa aactcatggc
      301 atacacctca gggtctggaa agttatctgt tgatggtgaa ggtagtagaa gtggtcatgg
      361 tggcacatgt ggtggaaagt cgattcaaaa taagaagcta ccttcaaagg aaaaatctga
      421 ttctgtagct gctgaatcta agattgaaga tactcatgaa caagatacct tattatctac
      481 tgaaaagaaa aagaagaaaa ggaaaaggaa gcaagttgat gaccttcggt ttgcagctga
      541 attaggcgta actggttcta aaaggaagga acgaaagaaa aaacttttag aagaaaggaa
      601 aaagaaacac aagaaggtga aagaagaaga tgagttgaac tttcctggtc gtgaggagat
      661 caaatttgga gacgtcgttc aagctccgcc aaagttggtt aacgttccca agcgatttgg
      721 gtcatcaatg aacgcttctc aagagaggat tcggctgaga gctatcgaag cgtataggga
      781 tcagaagaaa tgggcttcca ggcctggagt tcaccttcct actacagatt taccaccacc
      841 acaattgtag tgtttttgtt aatcataatt attcaatgtt tatcttgttt gcacattttg
      901 tagttttgat tcttgattcc tgacattatt tacattcact aggaaatatg tattaagaac
      961 agtaacttta ttatctgtca tacaacagtt attaaaaaac tacgtcgatg atactatacc
     1021 gtcattcata tgagaaaaac aagataaaac tacttttgct tgtaaa
//
LOCUS       XM_071832612             408 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842475), mRNA.
ACCESSION   XM_071832612
VERSION     XM_071832612.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..408
                     /gene="LOC139842475"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842475"
     CDS             1..408
                     /gene="LOC139842475"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688713.1"
                     /db_xref="GeneID:139842475"
                     /translation="MVSVVFQLCLEDSFHQSRCDTSLFIYRRGSDIAYLLLYVDDIVL
                     TASSAGLLQRIITSLHKEFAMTDLGPLNYFLGITATHTGSGMFLSKKQTPVEPGAKLT
                     SHGPAVKDPTLYRRLAGALQYLTFTRPDILYAV"
     misc_feature    <52..267
                     /gene="LOC139842475"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atggtttcag tggttttcca gttatgctta gaggatagct ttcaccaaag ccgttgtgac
       61 acatctcttt tcatttaccg tcggggatct gatatagcct acctgctttt gtatgttgat
      121 gacattgtgt tgactgcttc ttccgcaggt ttacttcagc ggatcatcac ttccttacat
      181 aaggaatttg ctatgacaga tttgggccct ttgaactact ttcttggcat cactgcgact
      241 catactggat ctggaatgtt cttatctaag aaacagaccc cggttgaacc aggggccaaa
      301 cttaccagtc acggccctgc tgtgaaagac ccaactctgt accgcagact tgcaggagct
      361 ttacagtatc tcacgtttac tcgtcctgac attctttacg ctgtatag
//
LOCUS       XM_071832613            1293 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fasciclin-like
            arabinogalactan protein 8 (LOC139842476), mRNA.
ACCESSION   XM_071832613
VERSION     XM_071832613.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1293
                     /gene="LOC139842476"
                     /note="fasciclin-like arabinogalactan protein 8; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 Proteins"
                     /db_xref="GeneID:139842476"
     CDS             1..1293
                     /gene="LOC139842476"
                     /codon_start=1
                     /product="fasciclin-like arabinogalactan protein 8"
                     /protein_id="XP_071688714.1"
                     /db_xref="GeneID:139842476"
                     /translation="MNPFTIITFLLITAVTGNNISDILSQVPDYSVYNTYLTQTRLND
                     QINNQGTVTVLVLNNTAVTKYLANQPLFVIKSALSIHVLLDYFDYSKLLSIGGGSAIT
                     TTLYQTTGTAIHDTGFVNITDLPNKRIGFGSKGYDPLALYTKSVKQIPYNISVLEIDS
                     PILPLQMLEGIAAAPLPSPSLSPSPSPSVSMSPSPSPSKLSDLNINITSVLVNAGCFN
                     FARIIYNTGVLSMFEKAELEGFTLFAPKDSAFKVQGLPNIDNLSNNDLISLLKYHAIS
                     NYVPKASLINEKNPVDTLASNNLAKFNFTIHVKGDLITIDSGVDISRIESMVFDKAPV
                     SIYRIDNVLLPINMFSETVTGPAPAPVIASRPNASSPEAPKISSPADGGSAPADGGPA
                     PADSPTADLEKSGASNGSSGINDLMLLLAIVMVSIIVG"
     misc_feature    640..1035
                     /gene="LOC139842476"
                     /note="Fasciclin domain; Region: Fasciclin; pfam02469"
                     /db_xref="CDD:396845"
ORIGIN      
        1 atgaatccct tcaccatcat caccttcctc ctcatcaccg ccgtcaccgg caacaacatc
       61 tccgacatcc tctcacaagt tccagattac tccgtctaca acacttacct cactcaaact
      121 agactcaacg accaaatcaa caaccaagga acagtcaccg tcctcgtact caacaacacc
      181 gccgtcacaa aatacctcgc aaatcaacca ctcttcgtaa tcaaatccgc attaagcatt
      241 cacgttcttc ttgattattt cgattacagt aaattattat caatcggtgg cggtagtgct
      301 atcacaacta cgctatatca aaccaccgga acggcaatcc atgataccgg attcgttaac
      361 ataacggatc tacccaataa acgaatcgga ttcgggtcaa aaggatacga tcccctcgct
      421 ttatatacaa agtcggtgaa acagattccg tataatattt ccgttttaga aattgattca
      481 ccgattctcc ccctgcagat gttggaagga atagcagctg caccgttacc atcaccgtca
      541 ctgtcaccgt caccgtcacc gtcagtgtca atgtctccat cgccgtcacc ttcgaagttg
      601 tccgatctca atataaatat cacaagtgtg ttggtgaatg caggatgctt taattttgcg
      661 cgaattattt ataacaccgg agttttatca atgtttgaaa aggccgaatt ggaaggattc
      721 acgttattcg caccgaagga ttcggcgttt aaggttcaag gattacctaa tattgataat
      781 ttaagtaata atgatttgat ttcgttacta aagtatcatg cgatttcgaa ttacgttccg
      841 aaagctagct tgatcaatga gaaaaatccg gttgatacgt tagcttcgaa caatttagct
      901 aaattcaatt tcacaattca tgttaaaggt gatctgatta cgatcgattc aggtgttgat
      961 atttcgcgta ttgagagtat ggtgtttgat aaggcaccag ttagtattta caggattgat
     1021 aatgttcttc ttccgattaa catgtttagt gaaacagtta caggtcctgc acctgcacct
     1081 gtcattgcat ctagaccaaa tgcttcatcg ccggaagctc ctaagatatc gtctccggct
     1141 gatggtggtt ctgctccggc agatggtggt cctgctccgg cagatagtcc tacggcggat
     1201 ttggaaaaaa gtggtgccag taacggttct agtggtatta acgatttaat gcttttgcta
     1261 gctatagtta tggtatcaat tattgttggt taa
//
LOCUS       XM_071832614            1579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842478), mRNA.
ACCESSION   XM_071832614
VERSION     XM_071832614.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1579
                     /gene="LOC139842478"
                     /note="uncharacterized LOC139842478; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842478"
     CDS             1..1518
                     /gene="LOC139842478"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688715.1"
                     /db_xref="GeneID:139842478"
                     /translation="MKPSPGMFQSSKRSDWLRGEINKDDTRQELERSENKVRQLEAQL
                     SQQQQVSSIAKKKVEELEHETSRLKKELESEKEDTTQKLVGCENKVQQLEDQLSQQQQ
                     NLEELEHETSRLKKELESEKAAREEAWAKVSTLELQINAAMRDLKYEKRRLKAARERI
                     MLRETQLRAFYSTTKEISSLFAKQQEQLKSMQKTLEDEENYENLSVDNDINPNVDNQN
                     QNPIDLLRQSKEAIGSQSSGGMKAVDQVHTSSDEVSATENHDCDARNQETCEDTQEAE
                     FTRFDPGAKGPFGSDIDGGSTAAIETEQVLGTETQGLDQHIDLNKLNAGDTMVIDNEE
                     ERVETESDKIHQSKEPVEEDTQAGDTIRTANLLAYEVAGSWAYSATPSCHGENESPGS
                     GGDGGDGVLHDSASVAAESQTGVVRNFEHEALTKMIGIVAPKMQGQFGGVIESDSEKG
                     IASNSDTEDCAEDGSGESDGVPSYNDNKASEAMDEDDNDDDEASYRNRYGSIVIM"
     misc_feature    <76..>597
                     /gene="LOC139842478"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      
        1 atgaagccat cacctggcat gttccagagt tcgaagcgat ctgattggtt gaggggggaa
       61 attaataagg atgacactag acaggaattg gaaaggtctg agaacaaggt ccggcaactc
      121 gaagcccagc tttctcaaca gcagcaggtt tcttccattg ctaaaaagaa ggtagaagaa
      181 cttgagcatg aaactagcag gttgaagaag gaacttgaaa gcgaaaagga agacactaca
      241 caaaaattgg ttgggtgtga gaacaaggtc cagcaactcg aagaccagct ttctcaacag
      301 cagcagaact tagaagaact tgagcatgaa actagcaggt tgaagaagga acttgaaagc
      361 gaaaaggcag ctagggaaga ggcctgggct aaagtttcca ctcttgaact tcagatcaat
      421 gctgcaatgc gggatcttaa atatgaaaag cgtaggctaa aagctgcccg cgaaaggata
      481 atgcttcggg aaacgcagct ccgggcattc tattcgacga caaaggagat ctctagctta
      541 tttgcaaagc agcaggaaca gttaaagtct atgcagaaaa cactagaaga tgaggagaat
      601 tatgagaact tgtcagttga taatgatata aatcctaatg tcgataacca aaaccagaat
      661 ccgatagatt tgctccgtca aagtaaagaa gcaattgggt ctcagtccag tggcgggatg
      721 aaagctgtag atcaagttca tacatcaagt gacgaagtta gtgcaactga gaatcatgac
      781 tgtgatgctc gaaatcaaga aacttgtgaa gatactcaag aagcagaatt tactagattt
      841 gaccctggtg ctaagggtcc gttcggatct gatattgacg gcggaagtac cgcagcaatt
      901 gaaacagaac aagttttggg aaccgaaacc caggggcttg accaacatat tgacttgaac
      961 aagttaaatg ctggggatac aatggtgata gacaatgaag aggaaagagt tgaaactgaa
     1021 agcgataaaa tacaccaatc aaaggagcct gttgaagaag atacacaagc tggagacacc
     1081 attagaacag ctaacctatt ggcttatgaa gttgctggga gctgggctta cagtgctact
     1141 ccttcatgcc acggagagaa tgagtctccg ggaagtggcg gtgacggtgg cgacggggtt
     1201 ttgcacgatt ctgctagtgt agcagctgag agccaaactg gtgttgtaag gaactttgag
     1261 catgaagcac ttactaaaat gatagggatc gtagccccga agatgcaggg gcaatttggt
     1321 ggtgttatag agagtgatag tgaaaaaggc attgcatcta actcagatac agaagattgc
     1381 gccgaggatg gtagtggtga atctgatggg gtaccgtcat ataatgacaa taaagcgagt
     1441 gaagcaatgg atgaggatga taatgatgac gatgaagcaa gctaccgtaa tagatatgga
     1501 tctattgtga ttatgtaata gagcagtagg atgataattg agtatgtaaa tgtaaataaa
     1561 tgaagaacac acttgtaaa
//
LOCUS       XM_071832615             687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842479), mRNA.
ACCESSION   XM_071832615
VERSION     XM_071832615.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..687
                     /gene="LOC139842479"
                     /note="uncharacterized LOC139842479; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842479"
     CDS             1..687
                     /gene="LOC139842479"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688716.1"
                     /db_xref="GeneID:139842479"
                     /translation="MVLLTSMRFGKVSRGFSTFHGALYNTHLTEHKNIPVKEIFNAPD
                     GERIAWNWSRQLRGRAIDELHDLSNLLSNISLSDRRDNWSWLLDPSSIFITKKLTNII
                     DLQLIFPNSQAISTLCNPSIPLKVEIFVWRARLQRILVCLELDKRRFDLDIVRCPLCD
                     DDLESVEHILVKCICSKSLWDAFFPWWGFNNDAFNNMEDIFKDDQQNINSFSGRRIWQ
                     SLKWVCAYNI"
     misc_feature    <355..537
                     /gene="LOC139842479"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtattac taacatcaat gcgatttggg aaggtctcta gggggttctc aaccttccat
       61 ggcgctcttt ataacactca tttaacggaa cataaaaata taccggttaa ggaaatcttc
      121 aatgcacctg atggggaaag aattgcatgg aactggtcaa gacaactgag gggtcgtgct
      181 atcgatgagc tgcatgattt atctaatcta ctgtccaaca tttctttaag tgatcgtagg
      241 gataactggt catggttact tgatccgagt agtattttca taactaaaaa gctcaccaat
      301 attattgatt tgcaactcat atttccaaat tcacaagcga tcagcactct atgtaacccc
      361 tcaattcctc ttaaagttga gatatttgtg tggagagccc gccttcaaag aatactggta
      421 tgtttggaat tagataaacg aagatttgat cttgatatcg taagatgccc attatgtgat
      481 gacgacttag aatcggttga acatattctt gttaaatgca tatgctcgaa atcattgtgg
      541 gacgctttct ttccttggtg gggctttaat aatgatgcct ttaacaacat ggaagacata
      601 tttaaagatg atcaacaaaa tataaattct ttttcgggta gaagaatttg gcaatcattg
      661 aagtgggttt gcgcttacaa tatttga
//
LOCUS       XM_071832617            1989 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein transport Sec1a-like
            (LOC139842481), mRNA.
ACCESSION   XM_071832617
VERSION     XM_071832617.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1989
                     /gene="LOC139842481"
                     /note="protein transport Sec1a-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842481"
     CDS             1..1989
                     /gene="LOC139842481"
                     /codon_start=1
                     /product="protein transport Sec1a-like"
                     /protein_id="XP_071688718.1"
                     /db_xref="GeneID:139842481"
                     /translation="MSCTDSDSSSHGNGDYKTFRQISRDRLLYEMLKSSSSGDARSSW
                     KVLIMDKVTVKVMSASCKMTDITDQGVSLVEDIFKRRQPMPSMDVIYFIQPIKENLIM
                     FLSDMSGREPLYKKAFIYFSCPASKDLISKIKSDMSVLPRIGALREMNLEYFPIESQA
                     FTTDHDRALQDLYSQSAENSRQVDASLNIIAGRISTVFASMKEFPVVWYRAKGMDGSS
                     AATQRDLVPVKLASAVWNCITMYKTTIPNFPQTETCELLIVDRSLDLIAPIIHEWTYD
                     AMCHDLLELDGNKYVQEVVNKPGSEPQKKEFLLEDHDPVWLEMRHLHIAEASEKLSDR
                     MQNFMSKNKAAQLQQRDGSELSTREIQKMVQALPQYNEQMEKLSLHVEIAGKINKAIR
                     DEGLRDLGQVEQDLVFGDAGTKEVINCLRTYQDTKPEYKLRLMMIYAMTHPEKFEGDK
                     ATKLMQLAKLPPEDMKVIQNIKLLEGSNSKKKHHGSFSLKFDTQKRNHAIRKDRTGEE
                     ETWQLTRFYPMLEELLEKLGKRELPKDEYQCMNSPSSSSQSGSTHSTHDTSARSGAAN
                     HPHSRRSRRTATWAKPRSSADGHSSSASTSTSSDFKNMGQRIFVFIIGGATRSELRVC
                     HKLTAKLKREVILGSTSFDDPTQYIAKVKMLSEKGHSR"
     misc_feature    133..1947
                     /gene="LOC139842481"
                     /note="Sec1 family; Region: Sec1; pfam00995"
                     /db_xref="CDD:460020"
ORIGIN      
        1 atgtcatgca cagattccga ttcatcatct cacggcaacg gagattataa aactttccgt
       61 caaatcagcc gtgatcggtt gttatatgag atgctcaaat catcttcatc aggggacgca
      121 agatcaagtt ggaaggtact tattatggat aaagtcaccg tgaaagttat gtctgcttca
      181 tgcaaaatga cagatatcac tgatcaagga gtttcattgg tggaagacat ttttaagaga
      241 cggcaaccta tgccttctat ggatgtcata tacttcattc agccaatcaa agagaacctc
      301 atcatgttct tgtctgacat gtcaggaaga gaacctttat ataagaaagc atttatttat
      361 tttagctgtc cagcctcaaa ggatttgatt agtaaaatta agagtgacat gagtgtttta
      421 ccacgcattg gtgctctgag agaaatgaat ctggaatact tccctataga aagtcaggcg
      481 ttcacaactg atcatgatag agctctacaa gatctctaca gtcaaagtgc tgaaaattct
      541 cgccaagttg acgctagctt gaacattatt gcaggtcgca tttctaccgt ttttgcttca
      601 atgaaggagt tccctgttgt atggtaccgt gcaaagggca tggatggatc tagtgcagca
      661 acacaacggg acttggtgcc tgtaaagctt gcttctgctg tttggaactg tattacaatg
      721 tataaaacta ctatacctaa ctttccacag actgaaacat gtgaattgct catagtggat
      781 agatcacttg atctgattgc acccatcatt catgaatgga cttatgatgc aatgtgccat
      841 gatctgttag agttggatgg gaataaatat gtgcaagagg tagttaataa acctggcagt
      901 gagcctcaga aaaaagagtt ccttttagaa gatcatgatc cagtttggct tgaaatgcgc
      961 cacctacaca ttgctgaagc tagcgaaaaa ctgagtgaca gaatgcaaaa tttcatgtca
     1021 aaaaacaaag ctgcacaatt acaacaaaga gatggtagtg agttatcaac acgggagata
     1081 cagaagatgg ttcaagcttt gccacaatat aatgaacaaa tggaaaaact ttcactccat
     1141 gtagaaattg ctggaaaaat caacaaagct atcagagatg aagggctcag agatcttggt
     1201 caagttgagc aggatcttgt atttggtgat gctggaacaa aggaagtcat taactgttta
     1261 aggacgtatc aggacacaaa acctgaatac aagttgagat taatgatgat ttatgccatg
     1321 actcaccccg aaaagtttga gggtgacaaa gcaacaaagc ttatgcagtt ggcaaaattg
     1381 cctcctgagg atatgaaggt aatacaaaat attaaattgc tggagggatc aaatagcaaa
     1441 aagaaacacc atggatcctt ctccttaaaa tttgatactc aaaagaggaa tcatgcaata
     1501 agaaaagata gaacaggaga ggaggaaaca tggcaactca cacgatttta tcccatgtta
     1561 gaggagttgc ttgaaaaact tgggaaacgt gaattgccaa aggacgagta ccaatgcatg
     1621 aacagtccaa gttcaagttc tcagagtggt tctactcata gcacgcacga cacatcagca
     1681 aggagcgggg ccgctaatca tccacattca agaagatcaa ggaggactgc cacatgggca
     1741 aagccccgtt catctgccga tggacattcg agttctgcat caactagtac atcttcggat
     1801 ttcaaaaaca tgggacagcg tatctttgta tttataattg gtggggccac tagatctgag
     1861 ttacgagttt gtcacaagct tactgccaag ttaaagaggg aggttatact aggttcaact
     1921 agtttcgatg atccaacaca atatatcgca aaagtaaaga tgctttccga aaaaggacac
     1981 agtcgatga
//
LOCUS       XM_071832618             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139842482), mRNA.
ACCESSION   XM_071832618
VERSION     XM_071832618.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139842482"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842482"
     CDS             1..813
                     /gene="LOC139842482"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071688719.1"
                     /db_xref="GeneID:139842482"
                     /translation="MVRALFKMFNIWDSDDEDDLDYLRALAEELDADEAEEAANDERV
                     RKPRVYLRRDHEEACHPTIVLEAVASYDTWIWHTFFGVAGANNDVNVLNQSSLFDDIK
                     NRNAPVAPFTVNGNDYLNGYYLVDEIYPDWATLMKAYSTPTDEPRAKFKQFQESARKD
                     VERTFDVLQGRFHILQMVGRPHSVNKLRRILYCCVLLHNMIVEDNGFNITWLEEELLA
                     TDEANPNYVRNRSTSRDVREQEIRDRNVHDQLRHDLTEHIWSLPPNFRTMNA"
     misc_feature    <181..618
                     /gene="LOC139842482"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggtaagag cgttgtttaa aatgtttaat atttgggatt ccgacgatga agacgatttg
       61 gattatttac gagcattggc cgaagaattg gatgctgacg aagctgaaga agctgccaac
      121 gatgaacgag ttcgaaagcc tcgagtttac cttcgtagag atcatgaaga agcatgtcac
      181 ccaaccatcg ttctagaagc agttgcttca tatgatacgt ggatttggca tacattcttt
      241 ggtgttgcgg gtgctaacaa cgatgtgaat gttttgaatc aatcttcgtt attcgatgac
      301 atcaaaaata gaaatgcacc agttgctcca tttactgtga atggcaatga ttacttgaat
      361 ggttattatt tagtcgatga aatttatcca gattgggcaa cattaatgaa ggcgtattcg
      421 acaccaaccg atgaaccacg tgcaaaattc aaacaatttc aagaaagtgc acgtaaagat
      481 gtcgagagaa cattcgatgt tcttcaaggt agattccata ttctacaaat ggttggacga
      541 ccacatagtg tgaacaagtt aagacgaata ttgtattgtt gtgtgctctt gcacaatatg
      601 atagtcgagg ataacggatt taacattaca tggctcgagg aagaattact tgccactgat
      661 gaagcaaatc ctaactatgt aaggaatcga tctacaagtc gtgatgtaag agaacaagaa
      721 atacgagata gaaacgttca tgaccaactt cgacatgatc ttactgaaca catttggagc
      781 cttccaccaa actttagaac tatgaatgct taa
//
LOCUS       XM_071832619            2152 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NSP-INTERACTING
            KINASE 2-like (LOC139842483), mRNA.
ACCESSION   XM_071832619
VERSION     XM_071832619.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2152
                     /gene="LOC139842483"
                     /note="protein NSP-INTERACTING KINASE 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139842483"
     CDS             1..2058
                     /gene="LOC139842483"
                     /codon_start=1
                     /product="protein NSP-INTERACTING KINASE 2-like"
                     /protein_id="XP_071688720.1"
                     /db_xref="GeneID:139842483"
                     /translation="MKTLFLVLLVFNLSLQAQAKNEENPTSELETLIKIKSFLDPKGQ
                     TLNSWTADAKSYCDGAFEGVACNEFGKVMNISLQGKGLFGKIPAEIGELKSLTGLYLH
                     FNGLHGEIPKEIGELTQLTDLYLNVNNLSGEIPPELEKMANLQVLQLCYNQLTGSLPS
                     QLGSLKKLNVLALQYNQLTGAIPANLGDLETLQRMDLSFNRLFGSIPLTIADAPLLQV
                     LDVRNNTLSGNVPLVLKKLDDGFQYANNSELCGSGFADLDVCNSSFGPENPNKPEPFG
                     PQSKGVTSKAIPQSAYVTGNQSKSKSTNAGLAAILGAVVTTMFLVAGIFTFIWYRRRK
                     QRIGTAFESSDSRISTDQYQVKEIVNRRSASPLISLEYSNGWDPMSKSQTGSGLLQEV
                     LESYVFNVDDVESATRFFSDSNLLGRSSFSATYRGILRDGTIVAIKRIAKTSCISDEN
                     EFLKGLKILTSLKHENLLKLRGFCCSKGRGECFLIYDYVAKGNLLRYLDVKGKTGNGN
                     VLDWSTRFSIIQGVAKGIEYLHGTKGKKPALVHQNISAEKVLLDQHYDPLLSGSGLHK
                     LLANDIIFSTLKASAAMGYLAPEYTTTGRFTDKSDVYAFGILIFQIVSGKTRIGTSIR
                     QGAELCNFEDFVDVNLDGKFSEPEAVMLGKIALMCTHECPNSRPSIMTVAQELSNIGS
                     TTS"
     misc_feature    79..201
                     /gene="LOC139842483"
                     /note="Leucine rich repeat N-terminal domain; Region:
                     LRRNT_2; pfam08263"
                     /db_xref="CDD:462411"
     misc_feature    <193..2055
                     /gene="LOC139842483"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    286..357
                     /gene="LOC139842483"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    358..429
                     /gene="LOC139842483"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    430..501
                     /gene="LOC139842483"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    502..573
                     /gene="LOC139842483"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    574..645
                     /gene="LOC139842483"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    646..711
                     /gene="LOC139842483"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1246..2040
                     /gene="LOC139842483"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(1246..1260,1270..1272,1306..1308,1312..1314,
                     1402..1404,1456..1467,1477..1479,1483..1485,1627..1629,
                     1633..1635,1639..1644,1648..1650,1681..1683,1690..1692,
                     1741..1752)
                     /gene="LOC139842483"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(1246..1260,1270..1272,1306..1308,1312..1314,
                     1402..1404,1456..1467,1477..1479,1627..1629,1633..1635,
                     1639..1644,1648..1650,1681..1683)
                     /gene="LOC139842483"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1258..1260,1477..1479,1483..1485,1627..1629,
                     1633..1635,1639..1641,1690..1692,1741..1752)
                     /gene="LOC139842483"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(1678..1701,1729..1752)
                     /gene="LOC139842483"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 atgaaaaccc tttttcttgt tttacttgtt ttcaatctct ccttgcaagc ccaagctaaa
       61 aatgaagaaa accccacttc agaacttgaa accctcataa aaattaaatc ttttttagac
      121 ccaaaaggcc aaaccctaaa ttcttggacc gcagatgcta aaagttactg tgatggagct
      181 tttgagggtg ttgcttgtaa tgaatttggt aaagtgatga atatttctct tcagggtaaa
      241 gggctttttg gtaaaatacc tgctgaaatt ggtgagctaa aaagcttaac tgggttgtac
      301 ctgcatttta atgggttgca tggtgaaatt cctaaagaga ttggtgagtt gactcagctc
      361 actgatctgt atcttaatgt taataatctt tctggagaga ttcctcctga gcttgagaaa
      421 atggctaatc ttcaagtttt gcaactctgc tacaaccaat tgactggaag cttgccttca
      481 caacttggat ctttaaagaa acttaatgtt cttgctcttc aatataacca acttacgggt
      541 gcaatccccg ctaatcttgg agatttggag acgttacaga ggatggactt aagctttaat
      601 cgtctatttg gatccatccc gttaacaatc gctgatgccc cattgttgca ggtgttggat
      661 gtgcgaaata atacactttc gggaaatgtc ccgttagttt tgaagaaact tgatgacggg
      721 tttcagtacg caaacaactc agagttatgt ggatctgggt ttgctgatct agacgtgtgc
      781 aactcttctt ttggccctga aaaccctaat aaaccggagc catttggccc acagtcgaaa
      841 ggagtcacat ccaaggccat tccacagtct gcatatgtaa cagggaacca gtcaaagtca
      901 aagtcaacaa atgccggact tgcagccata ctaggagccg tagtgaccac catgttttta
      961 gttgcgggaa tttttacttt catatggtat cgtcgaagaa agcagagaat cggaactgcg
     1021 tttgaatctt ccgacagtcg gattagtacc gatcagtatc aagtcaaaga aatagtcaac
     1081 cgaagaagcg cttcaccgct tataagtctc gagtactcaa acgggtggga ccccatgtca
     1141 aaaagtcaaa ctggaagtgg gttgttacaa gaagttctcg agagctatgt attcaatgtc
     1201 gatgacgtcg agtcggcaac tcggttcttt tctgactcga atttattagg gagaagtagt
     1261 ttttcagcta cttatagagg gatattaagg gatggaacta tagttgctat taaacgtata
     1321 gcgaaaacaa gctgcatatc tgatgaaaat gagtttttga agggattaaa gattttaacg
     1381 tcgttaaaac atgagaatct tcttaaatta cgcggctttt gttgttcaaa aggtagggga
     1441 gagtgtttct tgatatatga ttacgttgca aagggtaact tgttgcggta tctcgatgtc
     1501 aagggcaaaa ctggaaatgg gaatgttctc gattggtcta ctcgattctc gattatccaa
     1561 ggcgtcgcta aaggtatcga gtacctacac gggaccaaag gaaagaaacc agctctcgtt
     1621 catcaaaaca tatcagccga aaaagtgctg ctcgatcaac actatgatcc tttgttgtcg
     1681 ggttcaggtc tacacaaact actagcgaat gacatcatct tctcgacact aaaagccagt
     1741 gctgcaatgg gataccttgc acccgagtac acaacaacgg gccggtttac tgacaagagc
     1801 gatgtttatg catttgggat tctcattttc caaattgttt caggtaaaac aagaattggc
     1861 acatctattc gccaaggtgc cgagttgtgc aactttgaag attttgtgga tgttaatctt
     1921 gatgggaagt tttctgaacc agaagctgtt atgctcggta aaattgcgtt gatgtgcact
     1981 cacgaatgcc cgaactcaag gccttcgatt atgacagtgg cccaagaatt aagtaatatt
     2041 ggttctacta catcttgatt tacatattgg tattttggaa ggtttagaaa agtaggggag
     2101 ttattttgtt cgagtttctc actcgagtta ctaggttatt gttgtaattt aa
//
LOCUS       XM_071832620            1314 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842485), mRNA.
ACCESSION   XM_071832620
VERSION     XM_071832620.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1314
                     /gene="LOC139842485"
                     /note="uncharacterized LOC139842485; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842485"
     CDS             1..1314
                     /gene="LOC139842485"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688721.1"
                     /db_xref="GeneID:139842485"
                     /translation="MDKTFKMLEFIIDDDSDDEKIYNFISSLADEDVEGEASSSRVPR
                     PRTYIPRDREDAAVRLYNDYFSETPNYTEKNFRRRYRMSRELFLRIIEGISNFNSSDI
                     PDYFMFFRERPDATGRQSLTILQKCTAAIRQMAYGTTPDLHDEYIKIGEKTAALCLDN
                     FCKCVFHLFARQYLRKPTAEDIARLYNFHAQKHGLPGMLGSIDCMHWEWKNCPIAWQS
                     QYTRGDKKGPSIMLEAVASQDLWIWHAFFGMAGANNDINVLNYSPLFNTIKNGTAPPS
                     PFDVNGHHYERAYYLGDGIYPDWAMLVKAPHSPTDEPREKFKRFQESARKDIERAFGV
                     LQGRFQMLKTPARSLHFNKIRRHMYACIVLHNMIQENNGFVIGKKEERMIQRNPPRRL
                     LRDLRDRDAMVKEIRDRQVHKQLEADLTEHVWNLSPYFRTANIIE"
     misc_feature    514..1119
                     /gene="LOC139842485"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataaaa cattcaaaat gctcgaattt attattgatg acgattcgga tgatgaaaaa
       61 atatataatt ttattagtag tttggcggac gaagatgtcg agggagaagc ttcaagttca
      121 cgagtccctc gcccccgtac ctatattcca agggatcgtg aagatgcggc agtgaggtta
      181 tacaacgatt atttttctga aactccaaac tatacggaaa agaactttag gcgacgttat
      241 cgaatgagtc gtgaattatt tctccgtatc atcgaaggta tatctaactt taatagtagc
      301 gatattcccg attattttat gttttttagg gaacgtcccg atgctactgg tcgtcaaagt
      361 ttgacgatac tacaaaaatg cacggcggcc atacgtcaaa tggcgtatgg aactacacct
      421 gatttacatg acgaatacat aaaaattggt gagaaaacag ctgctttatg tttagataat
      481 ttttgtaaat gcgtgtttca tttgtttgct agacagtact tgagaaaacc aacagccgaa
      541 gatattgctc ggctgtataa ttttcatgcc caaaaacatg gtttaccggg tatgcttggt
      601 agtattgatt gtatgcattg ggagtggaag aattgtccaa ttgcgtggca aagtcaatat
      661 actagaggag ataaaaaagg cccgtccatt atgcttgaag cagtcgcctc gcaagatttg
      721 tggatatggc atgcattctt tggtatggcg ggtgcgaaca acgacattaa cgttttaaat
      781 tattcaccat tgttcaacac cattaaaaat ggaactgctc caccttcacc attcgatgtt
      841 aacggccatc actacgaaag agcttattac ctaggtgatg gtatataccc cgattgggca
      901 atgttggtca aagctcccca ttctccaact gacgaaccgc gggaaaaatt taaaaggttt
      961 caagaaagtg cgagaaaaga tattgagcgt gcatttggag tattacaggg tagatttcaa
     1021 atgttaaaaa ctccggcgag atctttgcac ttcaacaaaa taagaagaca tatgtatgcg
     1081 tgtatcgtat tacataacat gattcaagaa aataacgggt ttgttattgg gaagaaagaa
     1141 gaaagaatga tacaacggaa cccaccacgc cggttactca gggatttgag ggatcgagat
     1201 gcaatggtta aggaaataag agataggcaa gttcacaaac agttagaggc agatttaacc
     1261 gagcacgttt ggaacttatc accttacttt cgtaccgcta atattattga gtaa
//
LOCUS       XM_071832621            2490 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139842486), mRNA.
ACCESSION   XM_071832621
VERSION     XM_071832621.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 77% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2490
                     /gene="LOC139842486"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842486"
     CDS             1..2490
                     /gene="LOC139842486"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071688722.1"
                     /db_xref="GeneID:139842486"
                     /translation="MASSSNYSAVDSVSSMSINHPVSPNVSGIDIGDSSDVLNASPFI
                     NECNHILSSVEHRTLNGSRLWFPVVPDALKPVVDSVYPSYDHCLRFYESYAEFAGFDV
                     KKASFSRLADGTINYVVFRCIRSGVPKRLAVDTLVNEPCVVSNHVDISKRNSSVISNH
                     AEAVNNKSKRQSRKGKEVVDNQVNDEHSSNKAPKFANRKSSTIKCGCEASLRCKYENG
                     KIFIFRFFEGHNHKLVSEANKNSLNKKRKMQYFDMNFVQDLASKSNIGPMLAHHINCD
                     ISGGYDMVGPTNVDYKNFRRDLLRHIGETDAHIVIENLLRKKEVLPDFTCEYRCDEEG
                     CLTGVFWADQLSKMNYKEFGDIVSFDATYGTNRYNMRFVPITGIDNHKKLVIFGAALL
                     SRETIDSYKWFIDCFLKTFSNEPGLVTTDQDPAVLEAVAEKFKTTKHILCMWHISQKL
                     KDKVGYVLYNNKVFRKRMNYIFWNKEMSVSSFERHWKSLIEDFELDGAKWFDDMYAIK
                     DLWIPCFFRDVPMNGLMRTSSLSESENSFFSKCKNKHLNLVDFFSRFDAAMDKQRHNT
                     RLIDSQMESRSIKCRTVKSIELHARDVYTPTFFLLVQDEIFQSDEMCSQISCVADGDD
                     ELKKIIEVQEKFIPPRRFCRHIFLVYEINDIFQIPKQQILRRWTKDASESLNVIFAGV
                     NYHSDAYMITKHLFNTFRRVVSNCKNDKEILQLFSDKFDGFVKEFAHSIPDQHSSITK
                     VQQIENVLGFSKPSNVKVRAPVVVPNKGQRISKRYKSAREVAASKSSVNRRKCHRCNE
                     LGHNVRTCTADIDSEGDLEDVYSDKVEEYDD"
     misc_feature    514..>2013
                     /gene="LOC139842486"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atggcttcct catccaatta ttctgcagtt gattcagttt cttcgatgag tattaatcat
       61 cctgtatctc ctaatgtttc tggaatcgat atcggtgatt catctgatgt tctgaatgct
      121 tcccctttta ttaatgaatg taatcatata ctgagttcag ttgagcatcg aactctaaat
      181 ggttctaggt tatggtttcc agtagttcct gatgcattaa agcctgttgt tgattctgtt
      241 tatccttctt atgatcattg cttgcgtttt tatgagagtt atgctgaatt tgctggattt
      301 gatgtcaaga aagcttcatt tagcaggtta gctgatggta ctatcaatta cgttgtgttc
      361 aggtgtatta ggtcgggtgt tcctaaaaga ttagctgtcg atactcttgt taatgaacct
      421 tgtgttgttt ctaatcatgt tgatatatcg aaaaggaatt caagtgttat ttctaatcat
      481 gcggaggctg tgaacaataa atcgaaacgc caatctagga aaggtaaaga agttgttgat
      541 aatcaggtta atgatgaaca ttcttccaat aaagctccta aatttgctaa ccgtaagtct
      601 tcaacaatta agtgtggttg tgaggctagt ctaaggtgta aatatgaaaa tggtaagata
      661 ttcattttca ggttttttga ggggcacaat cataagcttg tttctgaagc taataagaat
      721 tcgctgaaca agaagagaaa gatgcagtat tttgatatga actttgttca ggatcttgct
      781 tcgaagtcta atattggccc tatgcttgct catcatatta actgtgatat tagtggtggt
      841 tatgatatgg ttggtcctac taatgtagat tacaaaaatt ttaggcgtga tttgctaagg
      901 catattggtg aaactgatgc tcacattgtc attgaaaatc tgcttaggaa gaaggaggtt
      961 ttacctgatt ttacttgcga gtatagatgt gatgaagaag gttgtttaac tggtgttttt
     1021 tgggctgatc agttgtctaa aatgaattac aaagaatttg gtgacattgt gtcatttgat
     1081 gcaacatatg gtaccaatag gtacaatatg agatttgttc ctatcactgg tattgataat
     1141 cacaagaagc ttgttatttt tggtgctgca ttgctatcgc gtgaaactat tgattcgtac
     1201 aaatggttta ttgactgttt tctaaaaact ttttctaatg aacctggttt ggttactact
     1261 gatcaagacc ctgcagtgtt ggaagcggtg gctgagaagt tcaaaactac caaacacata
     1321 ttatgtatgt ggcacatcag tcagaagtta aaggataagg ttggttatgt tttgtataat
     1381 aataaagttt tccgcaaacg tatgaattac atattttgga acaaagaaat gtctgtatca
     1441 tcttttgaaa gacattggaa gtcgttaatt gaagattttg agttagatgg tgcaaagtgg
     1501 tttgatgata tgtatgcaat caaggatttg tggattcctt gcttttttag agatgtacca
     1561 atgaatggct taatgcgaac atcctcatta tctgaaagtg agaattcgtt tttctctaaa
     1621 tgcaaaaata agcatttaaa tttagttgat ttcttttcta gatttgatgc tgccatggat
     1681 aagcagcgtc ataataccag attgatagat tctcaaatgg aaagcagatc tattaagtgt
     1741 agaactgtta agtcgattga gcttcatgca agagacgtgt acactcccac cttttttttg
     1801 ttagttcaag atgaaatttt tcaatctgat gaaatgtgtt ctcaaataag ttgtgttgct
     1861 gatggtgatg atgaacttaa aaagattatt gaagttcagg aaaagttcat tcctcctcgt
     1921 cgtttctgtc gtcacatatt tcttgtttat gaaattaatg acatttttca aattcctaaa
     1981 caacaaatct tgaggaggtg gactaaagat gcatctgaat ctttgaatgt tatttttgct
     2041 ggtgttaatt atcattctga tgcctacatg attaccaaac atctttttaa tacctttagg
     2101 agagttgttt ctaattgtaa gaatgacaaa gaaatactcc agctttttag tgataagttt
     2161 gatggttttg ttaaagaatt tgcacattcc atccctgacc aacattcttc aattacaaag
     2221 gttcaacaaa ttgagaatgt tttgggattt tcaaagccaa gtaatgtaaa ggttcgtgct
     2281 ccagttgtcg ttccaaacaa aggtcaacgc atcagtaaaa ggtataaaag tgctcgagaa
     2341 gtggctgcca gtaagtcgtc tgtaaatagg agaaagtgcc atcgttgtaa tgagcttggt
     2401 cataatgttc gtacttgcac tgcagacatt gattccgagg gtgatctcga agatgtttat
     2461 tcagacaaag tcgaagagta tgatgattaa
//
LOCUS       XM_071832622             708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842487), mRNA.
ACCESSION   XM_071832622
VERSION     XM_071832622.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..708
                     /gene="LOC139842487"
                     /note="uncharacterized LOC139842487; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842487"
     CDS             1..708
                     /gene="LOC139842487"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688723.1"
                     /db_xref="GeneID:139842487"
                     /translation="MLHSVRLDPELKDSWRWNGSNNGLFTTKSPTSLIDSKTIRAGPN
                     AKETLRNNVVPKKVEIFIWRARRERIPARVELDKRGVDLHSVRCPLCDDDIESVVHSL
                     LSCEKVNEVWSKVFKWWGLNGVSNYSFDELLQGLPNLSFSDSGKYIWQGVIWTACYLI
                     WKNRNSKIFKNKCWSTPNALGEIQLKSFEWVAKRSKRKSIEWHTWFHNPSCYLMQLDL
                     IVCIVCDVIYDANLASV"
     misc_feature    <160..333
                     /gene="LOC139842487"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcttcatt cggtgaggtt ggatccggag ctaaaggact cgtggaggtg gaatggtagt
       61 aataatggtt tgttcactac aaagagtccc acttccttaa tcgattccaa aacaattcgt
      121 gcgggtccaa acgcaaaaga aacattaagg aacaacgtgg taccaaaaaa ggtcgagatt
      181 ttcatttgga gggctagaag ggaaagaatt ccggctcggg tagaacttga caaacgggga
      241 gtggaccttc attcggttcg ttgcccgctt tgtgatgatg atattgagtc ggtggttcat
      301 tctctactta gttgcgaaaa agtgaatgag gtatggtcta aagttttcaa atggtggggt
      361 cttaatggtg tctcaaatta ctctttcgat gaacttcttc aaggcttgcc gaacctctca
      421 ttctctgatt cgggcaaata catttggcaa ggggtaattt ggaccgcttg ctatctcata
      481 tggaaaaatc gtaattcgaa aattttcaag aataagtgtt ggagtactcc gaatgcacta
      541 ggtgagatac aattgaagag cttcgagtgg gtcgcgaaga gatcaaaaag aaaatcgatt
      601 gagtggcata cttggtttca taatccttct tgttatttaa tgcagcttga tttaattgta
      661 tgtatagtgt gcgatgtaat ctatgatgct aacttggcat ctgtgtga
//
LOCUS       XM_071832623             402 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842488), mRNA.
ACCESSION   XM_071832623
VERSION     XM_071832623.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..402
                     /gene="LOC139842488"
                     /note="uncharacterized LOC139842488; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842488"
     CDS             1..402
                     /gene="LOC139842488"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688724.1"
                     /db_xref="GeneID:139842488"
                     /translation="MADFMVEFINSETPTVVNETAPQNVTWKLHTDGASSSDGAGAGL
                     ILTSPTGEEHTYALRFAFSVSNNEAEYEALLSGLHIAEKMGITALKVAVDSQLVANQL
                     NGTFEARDPVMQKYLKLAEELANKFDSFSIT"
     misc_feature    79..399
                     /gene="LOC139842488"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(94..105,193..201,208..210,280..282)
                     /gene="LOC139842488"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggccgact tcatggtaga attcattaat tccgaaacac caacagttgt aaacgaaacg
       61 gcaccccaaa acgtcacgtg gaaacttcac actgacggag cgtcaagctc agacggggcc
      121 ggtgccggct tgatacttac aagccctacc ggagaagaac acacctacgc tttgcgcttc
      181 gctttctctg tttccaataa tgaagcggag tatgaagcgt tgctctccgg gttacatatc
      241 gcggaaaaga tgggtattac ggcactaaaa gtggcggttg attcacaact ggtggcaaat
      301 cagttgaacg gaacgttcga agccagagac cctgtgatgc aaaaatattt gaaactggcg
      361 gaagagttag ccaacaagtt cgattctttt tcaatcacat aa
//
LOCUS       XM_071832624             495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842490), mRNA.
ACCESSION   XM_071832624
VERSION     XM_071832624.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139842490"
                     /note="uncharacterized LOC139842490; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842490"
     CDS             1..495
                     /gene="LOC139842490"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688725.1"
                     /db_xref="GeneID:139842490"
                     /translation="MALNLSTNGIFSVKKLSSVYDQVYLGSIGNVAVSKWLSCLPKKV
                     NVFMWRLSLNNLPLRQNLKNRGIEIVSDVCPFCNIGQENGDCVFTRCRFITPIWRSFH
                     DWWGNAGLIPNGVLNAYSAATYTSGSSLTDMVNLATRYFLIWRYGNGEISLSMDLLIN
                     ELPF"
     misc_feature    <106..279
                     /gene="LOC139842490"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcgttga atctcagcac aaacggtatt ttttctgtta aaaaactctc ttcggtttat
       61 gatcaggtgt atcttgggtc aattgggaac gttgcggtta gcaaatggct atcttgcctt
      121 ccaaagaagg taaacgtttt tatgtggaga ttaagtttaa acaacctccc tctaagacaa
      181 aatctaaaaa accgtgggat tgagatagtc tcggatgtct gccctttttg taatattggt
      241 caagaaaatg gggattgtgt cttcacaaga tgcagattca taactccaat atggagaagc
      301 tttcatgact ggtggggtaa cgcaggtctg attccgaatg gtgttctcaa tgcctatagc
      361 gcagcaacct acacatccgg atcaagctta actgatatgg ttaatcttgc aacaaggtat
      421 tttcttatat ggcgatatgg aaatggagaa ataagcttgt ccatggatct cctaatcaac
      481 gagcttccat tttaa
//
LOCUS       XM_071832625            1614 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842491), mRNA.
ACCESSION   XM_071832625
VERSION     XM_071832625.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1614
                     /gene="LOC139842491"
                     /note="uncharacterized LOC139842491; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842491"
     CDS             1..1614
                     /gene="LOC139842491"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688726.1"
                     /db_xref="GeneID:139842491"
                     /translation="MSNNLLSVSQVYDKRHKVLFDEQQCYIMRKDYKVPENMILMTVP
                     RYQDLYILDMSKTYVKAAKGHQAIVSKATEQESMLWHKRMGYLSFRKMNHIIHNCLVE
                     GVNVKGFHVPDGCVPCKKGKQAKKPHKIKKHHSIDTPLELLHMDLFGPINKKSITGHS
                     FGLVVVMLKSKADTFEQIRLLITRLETMNKLRVGNSIQKLLQGDFWGYGNACKRVYNL
                     ESRCIEQCTEIDVQRHATIPAGKGYTWQFDYDKLFDSFNLPEDDSEDEEIAAQMMYNM
                     HISAEHMSNVHVQSQVPNVAEEIEPVIGPNDDESDSDDSVPALEESTLQSEGDDLYLD
                     DVYEDVVHQEPIQPVIEEPIQTANVDPLQTNTDDSTETDGLRRSSRTVSLPKHFDNYV
                     VDPAGVSGANTGESSTSDEHNQTGRIFRNAHCCFVSQIEHEDVKDALQYDEWVSAMHE
                     ELQQFNHLGVWRLVIPPSDCKPYGLKWVLKNKTDDQGIVIRNKARLVVRGYQQIPEID
                     YDEVYASVARLEAIRMFLAFASWKGFKVF"
     misc_feature    142..369
                     /gene="LOC139842491"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1378..>1608
                     /gene="LOC139842491"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgtcaaata acctgttgtc cgtctctcaa gtctatgata agaggcataa agttcttttt
       61 gatgaacagc agtgttacat aatgagaaag gattacaaag ttccagaaaa tatgattctt
      121 atgacggtac ccagatatca agacttgtac attcttgata tgtcaaagac ttatgttaag
      181 gcagcgaaag ggcatcaggc tattgtttca aaggctactg aacaggagtc tatgttatgg
      241 cataagagga tgggttacct aagtttcagg aaaatgaacc atataattca taattgtttg
      301 gtggaaggcg ttaatgtaaa agggtttcat gttcctgatg gttgtgtgcc gtgtaagaaa
      361 ggaaagcaag ccaagaaacc acacaaaatt aagaaacatc attccattga tactcctctt
      421 gagctacttc atatggatct ttttggtcca atcaacaaga agagtatcac tggacattcc
      481 tttggcttag tggtagtgat gctgaaaagt aaggctgata catttgaaca aataaggttg
      541 ctgatcacga gacttgaaac gatgaacaag ttgagggtgg gaaattcaat ccaaaagctg
      601 ttacagggag atttttgggg ttatgggaat gcatgtaaac gggtgtataa cttggagtct
      661 cggtgcattg agcaatgtac cgaaatcgat gttcaaagac atgcaacaat tccagctggt
      721 aaagggtata cgtggcagtt cgactatgat aagttgtttg attcattcaa tcttcctgag
      781 gatgattctg aggatgaaga gatcgctgca caaatgatgt ataacatgca tatctctgct
      841 gaacatatgt ctaatgtgca tgtacaatct caggttccaa atgtggctga agaaatagaa
      901 ccagtgatag ggcctaatga tgatgaatca gattcagatg attcagttcc tgcgttagag
      961 gaatctacat tacaatctga gggggatgat ttgtatctgg atgatgttta tgaggacgtg
     1021 gtacatcagg aacctattca acctgtgatt gaggaaccta ttcaaactgc gaatgtggat
     1081 cctttacaaa ccaatacaga tgattctact gaaacagatg gactaagacg gtctagtcga
     1141 acggtatctc tccctaaaca ttttgataat tatgttgttg accctgcagg tgtttcaggt
     1201 gctaatacag gtgaatcttc tacttcagat gagcataatc agactggaag aatcttcagg
     1261 aatgcgcact gttgctttgt ttcacaaatc gaacatgaag atgtcaaaga tgcgttgcag
     1321 tatgatgagt gggtttcagc tatgcacgaa gaacttcaac aattcaatca cttgggtgtt
     1381 tggaggttag taataccacc ttctgactgt aaaccatatg gcctgaagtg ggtattgaaa
     1441 aataagacag atgatcaagg aatcgtgatc cggaataaag caagattggt tgttcgagga
     1501 tatcagcaaa ttccagaaat agattacgac gaggtttatg cttctgtagc tagactggag
     1561 gctattcgaa tgtttttggc ctttgcgtcg tggaaagggt ttaaagtttt ttag
//
LOCUS       XM_071832627             405 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SPX domain-containing
            protein 3-like (LOC139842492), mRNA.
ACCESSION   XM_071832627
VERSION     XM_071832627.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..405
                     /gene="LOC139842492"
                     /note="SPX domain-containing protein 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842492"
     CDS             1..405
                     /gene="LOC139842492"
                     /codon_start=1
                     /product="SPX domain-containing protein 3-like"
                     /protein_id="XP_071688728.1"
                     /db_xref="GeneID:139842492"
                     /translation="MKFGKRLKQHVQETLPGWREMYLNYKDLKKLVKLISSSLEIENS
                     EAEFVYLLNNEIEKFNAFFMEQEEDFIIRHKELQQRIKRANECELLPEGEYEEEMARI
                     RKDIVDFHGEMVLLVNYSNINYTGNLRRHEST"
     misc_feature    4..378
                     /gene="LOC139842492"
                     /note="SPX domain of the plant protein SPX1 and similar
                     proteins; Region: SPX_AtSPX1_like; cd14481"
                     /db_xref="CDD:269902"
ORIGIN      
        1 atgaaatttg gcaagagact gaagcaacat gttcaagaaa ctttgcctgg gtggcgcgaa
       61 atgtacttga attacaagga tttgaagaaa cttgtgaaac taatttcttc gtcgttggag
      121 attgaaaatt ctgaagctga gtttgtgtac cttttgaaca atgaaatcga gaagtttaat
      181 gcatttttca tggaacaaga agaggatttc attattcgtc ataaggaatt gcaacaaaga
      241 ataaagaggg caaatgagtg tgaactattg ccagaaggag agtatgaaga agagatggca
      301 agaattagaa aagacatagt tgacttccat ggtgaaatgg tgcttttagt caactacagt
      361 aacatcaatt atactggtaa tttaagaaga catgagtcaa cttag
//
LOCUS       XM_071832628            1316 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842493), mRNA.
ACCESSION   XM_071832628
VERSION     XM_071832628.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1316
                     /gene="LOC139842493"
                     /note="uncharacterized LOC139842493; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842493"
     CDS             1..891
                     /gene="LOC139842493"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688729.1"
                     /db_xref="GeneID:139842493"
                     /translation="MILLTIDALDIASSNFNIVAFDLLAQIDKDEEEEVNQPIPRAPR
                     RFIHRDREGTAMRLWNDYFSENPTFPGDYFRRRYRMSRPLFIRICQGIMNYSQEPIPD
                     YFLYFHQKRDATGLLGFNVFQKCTSAIRQLAYGTAPDAFDEYLHMGQQTSYGCLNNFC
                     KSVIHLYGSEYMRKPTPQDVARLISAHAELHGFPGMLGSLDCMHWAWKNCPYKYKGHY
                     TRGDHGYPTIMLEAVASYDLWIWHAYFGPAGSNNDINVLNQSDLFNELLQDTAPPCNF
                     SVSGCNFNKGYYLADGIYPD"
     misc_feature    505..>885
                     /gene="LOC139842493"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgatacttc ttacgataga tgcgttggat attgcaagtt ctaatttcaa tattgtcgca
       61 ttcgatctac ttgctcaaat agataaagac gaagaggaag aagtcaatca accaattcca
      121 agggcgcctc gaagatttat tcatagagac cgagagggaa ccgcgatgcg tttatggaat
      181 gattattttt ccgagaatcc aacttttccc ggagattatt ttcgtcgccg ttataggatg
      241 agtcgaccat tgtttatacg catatgccaa ggtataatga attactctca agaacctatt
      301 cccgattatt ttttatattt tcatcaaaag cgggatgcta ccgggttgtt gggttttaat
      361 gtttttcaaa aatgtacatc cgcaatacgc caattagcat acggtactgc acctgatgct
      421 tttgacgagt acttacatat gggccaacaa acatcatacg gttgtttgaa taatttttgt
      481 aagagcgtga ttcacttgta cggttcggag tatatgagaa aaccgactcc acaagacgta
      541 gcacgtctta tatccgcaca tgcggaatta catggttttc cgggaatgtt gggtagctta
      601 gattgtatgc attgggcttg gaaaaattgt ccatataaat ataaaggtca ttatactaga
      661 ggcgatcatg ggtatccaac aatcatgtta gaagctgtgg catcttatga tttatggatt
      721 tggcatgctt attttggacc cgctggttca aacaacgaca tcaatgtcct taatcaatct
      781 gatttattta atgagttact tcaagacacg gctccaccgt gtaatttttc ggttagtggt
      841 tgtaatttca ataaaggtta ctacctagcc gatgggatat atccggactg agcgacacta
      901 gttaagtctt tcaaaagtcc tcctgaccca aaatcggcaa aatttaaaaa atatcaagaa
      961 tctgctcgga aagatattga acgggcattc ggtgtacttc aaggtcgatg gcaaataata
     1021 aaaaacccgt gccgacaatt ctatgtcgaa agaatccgaa gaattatgca cgcttgtgtt
     1081 attttgcata atatgatcac cgaagacaat ggatatgcaa tgtgttcact tgaagagaat
     1141 tacaagccag ctcgtcgtcc acatcgctca atccaggaaa gggttgacgc acacatgcgc
     1201 attaataaag aattacgaga ttcgtccttt catcatctac tacgacaaaa gctcatcgaa
     1261 cacatttgga atcttccggt tcatttccgt gttcggcacg ttccacatgc ccgagc
//
LOCUS       XM_071832629             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842495), mRNA.
ACCESSION   XM_071832629
VERSION     XM_071832629.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139842495"
                     /note="uncharacterized LOC139842495; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842495"
     CDS             1..846
                     /gene="LOC139842495"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688730.1"
                     /db_xref="GeneID:139842495"
                     /translation="MYEGAKSCVRTPVGNTEVFPIEVGLHQGSALSPFLFALILDELS
                     RGIQEGIPWCLIFSDDIVLISDSKEELNRRLEQWRVAFESNGLHISRQKTEYLSCNFD
                     RNDDEQECWPMTKAQERKMEVAEMRMLRWTCGKTMLDLIPNSVFRENLKVRSIVDKLR
                     EERLRWFGHVRRRSPAAPVRRVETLTVDGVRRRGRPTRFADMFVCMIICLLYVCYVCF
                     IYGLVTYASVYVSRFVCFVVLGGLYVVIHVYCSSVVTSLEISCASHYCLAHHLSFCPE
                     LRPTV"
     misc_feature    <43..294
                     /gene="LOC139842495"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    <64..579
                     /gene="LOC139842495"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; Region: YkfC; COG3344"
                     /db_xref="CDD:442573"
     misc_feature    82..84
                     /gene="LOC139842495"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgtatgaag gggcgaagtc ttgtgttcga acgccggtgg gaaatactga agtttttcca
       61 atagaagtag gcctgcacca gggatcggcc cttagccctt ttctttttgc tttgatcctt
      121 gatgagctct ctcgagggat acaagagggc atcccttggt gcttgatctt ttccgatgat
      181 attgtgctta tttcggattc taaggaggag cttaatagaa gactagagca atggagggtg
      241 gcctttgaaa gtaatggact acacattagt agacaaaaga cggaatatct tagttgcaat
      301 tttgatagga atgatgatga acaagagtgt tggccaatga caaaggcgca agagaggaag
      361 atggaggtgg cagagatgag gatgcttagg tggacatgcg gtaaaaccat gctggatttg
      421 attccaaata gtgtttttag agagaacctg aaagttagaa gcatcgtcga caaactaaga
      481 gaagagcggc tacgatggtt tgggcatgtg agaaggcgat ctcctgctgc acctgttagg
      541 agagtcgaga cacttacggt tgacggtgta cggagaaggg gtagacctac ccggtttgcg
      601 gatatgtttg tatgtatgat tatatgtttg ctttatgtct gctacgtttg ttttatatac
      661 ggccttgtta cgtatgcttc tgtctatgta tctaggtttg tatgttttgt tgttcttggt
      721 ggtttgtatg tggtcataca tgtttattgt tcttctgttg taacttctct tgaaatttct
      781 tgtgcttcgc actactgtct tgcgcaccat ctctcgttct gtcctgagct tcgccctact
      841 gtctaa
//
LOCUS       XM_071832630             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842496), mRNA.
ACCESSION   XM_071832630
VERSION     XM_071832630.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139842496"
                     /note="uncharacterized LOC139842496; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842496"
     CDS             1..903
                     /gene="LOC139842496"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688731.1"
                     /db_xref="GeneID:139842496"
                     /translation="MSKNLFKFFDIWDSDEEDELDLLHAMTEELDADEAAEAEEAANS
                     ERILYQSIFDFFIQRNDALGRPGFTTTQKNCPVAWKGQYTSGHQGHPTNVLEAVASYD
                     TWIWRAFFGVAGAKNNVNVLDQSSLFDEIKNGTAPYAPFSVNGNDYSNGYYLADGIYP
                     DWTTLIKAYSTPTDEPRAKFKQFQESARKDVERTFGVLQVRFHILQVAGRPHSVNKLR
                     RILYCCVLLHNMIVEDNGYNITWLEEESLKSDEANLNYVKNPSTSREARELEIRDRDI
                     HNQLRQDLTEHIWRLPPNFRSLNA"
     misc_feature    217..708
                     /gene="LOC139842496"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcaaaaa atttgtttaa attttttgac atttgggatt cggatgaaga agacgagttg
       61 gatcttttac acgcgatgac ggaagaattg gatgctgacg aagctgctga ggctgaagag
      121 gctgcaaaca gcgaacgaat cctttaccaa agcatttttg atttctttat acaaagaaat
      181 gatgctcttg gtcgaccagg tttcactacg acgcaaaaga attgtccggt tgcttggaaa
      241 gggcaatata ctagtggtca tcaaggtcac ccaaccaacg ttcttgaagc tgttgcttca
      301 tatgatacgt ggatttggcg tgcatttttc ggtgttgcgg gtgctaagaa caatgttaat
      361 gtgttggatc aatcatcgtt gttcgatgag atcaagaatg gaactgcacc atatgctcca
      421 tttagtgtaa atggtaatga ttactcaaat ggttattatt tagcggatgg tatttatcca
      481 gattggacaa cgttaatcaa ggcgtattcg accccaacag atgagccacg agcaaaattt
      541 aaacagtttc aagaaagtgc acgtaaggat gttgagagaa cattcggtgt tcttcaggtt
      601 cgattccata ttttacaagt ggctggacga ccacacagtg tcaacaagtt gaggagaata
      661 ttatattgtt gtgtgctctt gcacaacatg atagtcgagg ataatggcta caacattaca
      721 tggctcgagg aagaatcact taagagtgat gaagctaatc taaactatgt aaagaatcca
      781 tctacaagtc gcgaggcaag agaactagaa attcgagacc gtgacattca taaccaactt
      841 cgacaagatc tcactgaaca catttggaga cttccaccaa actttagaag tttaaatgct
      901 tag
//
LOCUS       XM_071832631             552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842497), mRNA.
ACCESSION   XM_071832631
VERSION     XM_071832631.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..552
                     /gene="LOC139842497"
                     /note="uncharacterized LOC139842497; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842497"
     CDS             1..552
                     /gene="LOC139842497"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688732.1"
                     /db_xref="GeneID:139842497"
                     /translation="MVENLELVSKKYPHPYKLQWLNQGNEVKVTRQVIVPFSIGSVYQ
                     DEITCDVIAMELCHLLLGRPWLFDKYVYHNGHQNTYSLYLNGKKITLTSLKPSEIPRA
                     DPTAKNDKTLFMTQAEVDTELNGGTGAYLLLLVESDELNQHDDVPARVKPLLSEFADV
                     FLMCEIRYINYRWKTLVKKTVTH"
     misc_feature    <4..198
                     /gene="LOC139842497"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(52..63,73..84)
                     /gene="LOC139842497"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggtggaaa atcttgagct ggtttcaaag aagtatcctc atccctacaa acttcaatgg
       61 cttaaccaag gcaatgaggt aaaggtcact cgccaagtta ttgttccatt ttctattggt
      121 agtgtttatc aagatgagat tacttgtgat gttattgcta tggaactttg tcatttgctg
      181 cttggtagac cttggttatt tgataagtat gtctatcaca atggacatca aaatacttac
      241 tcactgtatc ttaatggtaa aaagatcacc ttaacttctt taaagcctag tgaaatacct
      301 agagctgacc ctactgctaa gaatgataaa actttgttta tgactcaagc tgaagtcgat
      361 actgagttaa acggtggtac tggtgcttac ttgttgctgc tggttgaaag tgatgagttg
      421 aaccagcatg atgatgtacc agctcgggta aaaccattgt tatccgaatt tgctgatgtg
      481 ttcctgatgt gcgaaatcag gtatataaat tatcgttgga aaaccctggt taaaaagact
      541 gttacacact aa
//
LOCUS       XM_071832632            1389 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides hydroquinone
            glucosyltransferase-like (LOC139842501), mRNA.
ACCESSION   XM_071832632
VERSION     XM_071832632.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1389
                     /gene="LOC139842501"
                     /note="hydroquinone glucosyltransferase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842501"
     CDS             1..1389
                     /gene="LOC139842501"
                     /codon_start=1
                     /product="hydroquinone glucosyltransferase-like"
                     /protein_id="XP_071688733.1"
                     /db_xref="GeneID:139842501"
                     /translation="MTTPPHIAILPSPGMGHLIPMAEFAKRLVQHHHISATIIIPTTG
                     PPPKAQINVVESLPENINHIFLPPVMNLPEGARPEILIWFIMKNSLLSVQEALKSLTS
                     KTKLVALVFDMFGHDTMEIAKEFNLLNFLFFPMNAMALSFTFTLTKLDQESSCEYKDL
                     TYPVHVPGSVSFHGRELMAPVQERTDEVYKGYLLLSKRLTLLDGIMVNSFEELEEETF
                     RVLRSGTAGQTPIYSIGPLVQCGPSDGADRNQCLKWLDSQPNESVVLVSFGSGGTLSL
                     DQVHELAHGLEMSYQRFLWILRSPSKASNASFFTASSENDPLEFLPDGFLARTVKRGL
                     VVPSWAPQIEILSHEAIGGFLTHCGWNSTLESIVHGVPMIAWPLYAEQHMNAKMMTEA
                     VDLALKIETDENGIVRKEVIEKVVKELIGGDEGKRISKRLKELKVASMKALSNEGSSM
                     ESLSKIALQLKK"
     misc_feature    7..1371
                     /gene="LOC139842501"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(46..51,55..57,508..510,517..522,532..534,613..615,
                     808..810,1069..1071,1075..1077,1081..1086,1093..1095)
                     /gene="LOC139842501"
                     /note="active site"
                     /db_xref="CDD:340817"
     misc_feature    order(46..48,808..810,1069..1071,1075..1077,1081..1086)
                     /gene="LOC139842501"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     misc_feature    49..51
                     /gene="LOC139842501"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 atgacaacac cacctcacat agccattctt ccgagtccgg gaatgggtca ccttattccg
       61 atggccgagt tcgctaaacg actcgtccaa caccaccata tctccgccac catcatcatc
      121 cctaccaccg gacctccacc gaaagcccaa atcaacgtcg tcgaatcttt gcccgaaaac
      181 atcaaccata tttttctccc accagttatg aacttacccg agggtgcccg gcccgagatt
      241 ctgatttggt tcatcatgaa aaacagtctt ttaagtgtcc aagaagcttt aaagtctttg
      301 acatcaaaaa caaagttggt tgctttagtg tttgatatgt ttggacatga tacaatggaa
      361 attgctaaag agtttaatct tttaaatttc ttgttttttc caatgaatgc tatggcttta
      421 tcgtttactt ttacattaac aaagcttgat caagagtctt cttgtgagta taaagattta
      481 acttatccgg ttcatgtacc aggttcggtt agtttccatg gccgagagtt aatggccccg
      541 gttcaagaac ggaccgatga agtatacaaa gggtatcttt tactttccaa aaggcttact
      601 ttgcttgatg gtatcatggt gaatagtttt gaggagttgg aagaagaaac ctttcgagtt
      661 ttgaggtctg ggaccgctgg gcaaacgccc atttactcga tcgggccatt ggttcagtgc
      721 ggcccaagtg atggggcaga ccgaaaccag tgtttaaaat ggttggatag tcaaccaaat
      781 gaatctgtgg tgttggtatc ttttggaagt ggagggaccc tttccttgga tcaagtgcat
      841 gagctagccc atgggctaga aatgagttac caaaggtttt tgtggatact aagaagccca
      901 agtaaggcct caaatgcttc cttttttacc gcctctagcg agaacgaccc tttagaattt
      961 ttaccggatg ggtttctcgc taggacagta aaaaggggtc tagtcgtccc atcgtgggct
     1021 ccacaaatcg agatattgag tcatgaggca ataggtggat tcttgacgca ttgtggatgg
     1081 aactcgaccc tagaaagtat agtacatggt gtgccgatga ttgcttggcc cctttatgct
     1141 gagcaacaca tgaacgctaa aatgatgact gaagcggtcg atctcgcatt aaaaattgaa
     1201 accgatgaaa atggaatcgt tcgaaaagag gtgatcgaaa aagttgtgaa ggagctaatt
     1261 gggggagatg aagggaaaag gatatccaaa agattgaaag aactaaaagt tgcttccatg
     1321 aaagctctaa gtaatgaagg gtcatccatg gagtcattgt ctaagattgc tctccaattg
     1381 aaaaaatga
//
LOCUS       XM_071832633            2208 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842502), mRNA.
ACCESSION   XM_071832633
VERSION     XM_071832633.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2208
                     /gene="LOC139842502"
                     /note="uncharacterized LOC139842502; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842502"
     CDS             1..2208
                     /gene="LOC139842502"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688734.1"
                     /db_xref="GeneID:139842502"
                     /translation="MEGHPYVKRLSDNEFRLVEDLYRMNMAPKDIFSVLKQQYPNNVS
                     TMSTIYNALKKNRLMETGCKSPMQVLMSLLNSSGYIYYSTTTTSNELNNLFFVHPISY
                     NIWRAFPHVLIIDVTYKTNPYKMPFVEIIGVTSTSKTFCIAFAFIYDEKKVNYRWVLE
                     CLKLTLGECMLPRVIVTDKEMALINACKVVFSDAARLLCRWHIHRNIIGKWKRSFSSK
                     CDWNEFFRLWELLENSSTLKSYTDNYHQLESFLKHLNRTRILNYVNKTWLDKFKETFV
                     SVWIDQHLHFRNTTTNRVESQHSVLKRYLESSNSSLDRFVSCIDQIVRSQDTAIKESL
                     KKSIVFRIHNHKLRCFTHLQGNISNEALNKMLKDRERFMDHIDDCDCRLRTSCGLPCA
                     CEISTYITSQNYIPLSSIDVFWRKLDISPLVCEQDDDVSCDNELKHFAENFNKQSKNV
                     KKSWLKKLKDIINPDSVKDPARHSSYDINLNEEPEIDLNEEPEIDLNEEPEIDLNDEP
                     KIDLNEVPYEFSSLYIFNQNEMPRMRNSHMFNGIPKLLHPYIKNIYNVEGDGNCGYRA
                     FAVSLWGNEHLYENIRFEMKEELQNKLEFYKSMFEREIKSLNDSLCFVGSPCPPDYWM
                     MMPYAGILIANRFGVIVHSLSMSESSTFFPFWMGPDEFQQIRVLTIALVNGENHYVTV
                     ELQGDYPMPPVTGYFHDRYITNSAAKWKTIYKERFEEFMRFNRRNPDFVHISD"
     misc_feature    <85..>939
                     /gene="LOC139842502"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
     misc_feature    331..618
                     /gene="LOC139842502"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    1657..2037
                     /gene="LOC139842502"
                     /note="OTU (ovarian tumor) domain family; Region: OTU;
                     cd22744"
                     /db_xref="CDD:438581"
     misc_feature    order(1684..1686,1807..1809,1816..1818,1837..1848,
                     1963..1965,1969..1971,2014..2016,2029..2037)
                     /gene="LOC139842502"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:438581"
ORIGIN      
        1 atggagggcc atccatatgt aaaaagactt tctgataatg aatttaggtt ggttgaagat
       61 ttatatagga tgaatatggc accaaaagat attttctcag tacttaagca gcagtatcca
      121 aataatgtgt ctacgatgag tactatttac aacgcactta aaaaaaatcg ccttatggag
      181 accggatgca aatctcccat gcaggttctt atgtctcttt taaattctag tggttatatt
      241 tattattcta ccacaactac ttccaatgag ttaaataatt tattcttcgt tcatccaata
      301 tcatacaata tttggcgtgc atttccacac gtgttgatca tagacgtcac gtacaaaact
      361 aacccctata agatgccttt cgttgaaatt attggtgtaa cttcaaccag caaaacattt
      421 tgtatagctt ttgccttcat ttatgatgaa aagaaggtta actatagatg ggttttagaa
      481 tgtctaaagt taaccctagg cgaatgcatg cttccacgtg ttatagttac agataaagag
      541 atggcattaa taaatgcatg caaagtagtt ttttcggatg ctgctcgatt actgtgtaga
      601 tggcacattc atcgtaatat aattggtaag tggaagcgat cattcagttc aaaatgtgat
      661 tggaacgaat tttttaggtt atgggagtta ctcgagaatt cttcaacgct aaaatcttat
      721 accgataatt accatcaact tgagtcattt ctaaaacact taaatcgtac acggattcta
      781 aattatgtaa ataaaacttg gttggataaa ttcaaggaaa cgtttgtatc tgtctggatt
      841 gatcaacatc ttcactttag aaataccaca actaaccgag ttgagagtca gcactctgta
      901 ctaaaaagat atttggagag ttcaaactct agtctagata gatttgttag ttgtatcgac
      961 caaattgtgc ggtcacaaga tacagctatt aaagaaagtt tgaaaaagag catagttttt
     1021 cgcattcaca atcataaact acggtgcttc acacatttac agggtaatat ttcaaatgaa
     1081 gctttgaata aaatgcttaa agatcgtgaa cgatttatgg atcacataga tgattgtgat
     1141 tgtcgacttc ggacctcttg tggactacca tgtgcttgcg aaatttcaac gtatataact
     1201 tcacaaaatt atattccctt aagttcgatt gatgtttttt ggagaaagct ggatatttca
     1261 ccgttagttt gtgaacaaga tgatgatgtt agttgtgaca atgaactcaa acactttgct
     1321 gaaaacttta acaagcaatc gaaaaatgta aaaaaaagtt ggttgaaaaa gttaaaggat
     1381 ataatcaatc cagattcggt taaggatccg gcaagacaca gttcgtacga tataaacttg
     1441 aacgaggaac cagagataga cttgaacgag gaaccggaga tagacttgaa cgaggaaccg
     1501 gagatagact taaatgatga accgaaaata gacttaaacg aggttccgta tgagttctcg
     1561 agtttataca tcttcaacca gaacgaaatg ccaagaatga gaaattctca tatgtttaat
     1621 ggtattccaa aattacttca cccgtacata aagaatatat acaatgttga aggtgatgga
     1681 aattgtggat atcgggcatt cgctgtttcc ctctggggaa atgaacattt atatgagaat
     1741 attcgatttg aaatgaaaga agagttgcaa aacaaacttg aattctataa aagcatgttc
     1801 gaacgtgaaa taaagtcgtt gaatgattct ctgtgtttcg ttggatcgcc ttgtccacca
     1861 gattactgga tgatgatgcc ctacgcaggt atactgatag ccaatagatt tggtgtaatc
     1921 gtccactcat tgagcatgtc ggaaagctcg actttttttc cgttttggat gggtccagat
     1981 gagtttcaac aaataagagt tcttacaatt gccctagtaa atggtgagaa tcattatgta
     2041 acagtggaat tacaaggaga ttaccctatg cctccggtta caggctactt tcatgatcgc
     2101 tacattacca attctgcagc taaatggaaa acaatttata aggagcgctt tgaagaattt
     2161 atgcgattta accgtcgtaa ccctgatttt gttcacataa gtgattaa
//
LOCUS       XM_071832635            4287 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842503), mRNA.
ACCESSION   XM_071832635
VERSION     XM_071832635.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4287
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4287
                     /gene="LOC139842503"
                     /note="uncharacterized LOC139842503; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139842503"
     CDS             1..4287
                     /gene="LOC139842503"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688736.1"
                     /db_xref="GeneID:139842503"
                     /translation="MGDNDDIVMIMAEEFASAVAHAPPRLKYTHVWCFLDVPKGNVLR
                     LPKELLEKAPELKKGNSYQCVDIDDRVHTWGLLEEKNRKKPQLVCFFWLEEICSKSLN
                     LRGMTFTTSIDSMCLGCLGMEAEDRGFQVYVYGHVYTCLWGHVYRKLTSVNVLRGLYD
                     KLDVLGYLDVCLMTVESQKLFTIPSLVNFFAFSLFGNFRYEEFSKKEKNLVNSNVVGG
                     VVLESVGPSDVQVVSDKQSKKRASLRKAHASASGSSHVSVSFSLHAQLTPIYTIFASF
                     DVSGVSPLYRDSGDCTSVCMQCGALFWRAEHVKSYFWDKQLHYHRCCENGRVYLPRYE
                     DPPGEFKRLLETPAFLDNVRAYNQMFSMMSFCARIDENINDGRSPYVFKISGQIYHWL
                     GSMCPEQGSPPRFLQLYIYDTDHEVENRMGHFRGRDSGRLSEVVVTQLVKLLDSNNAL
                     VKLFRTARDKCAGSEVPTFKVCLYSLTGLSQHALPTSDAIGAIVFYSVPQSISDYDVI
                     IEPQSQLPRRVNKLHPLYMSLQFPLMFFFGEPSFHPDLKLCAASGSQGARYVVTAYCS
                     IELDQMDYIRNKQNDIRAEYLSGLYDAIDRGDKTGSDVSSMTILPASFTGGPRYMYSH
                     YLDALAISRIFRKPTFFVTFTCNAKWPEIARYLKPFPHLSPSDRADIVARVFHMKKRG
                     LPHCHTLVWVHSSVSAAIRDNLDDYISAELHDLRIDYPSYAVISATMMHGPCGLANKW
                     ASCNQIFHVQKTSQRNTLTRRTLMTTVVLTIAGVILAHINVKCCGTTSLIKYMFKYIS
                     KGTDRVAVCIAKPIRSDSHQSQQQTQPVDEIKNFIDALFICPHEACWRIFNFPIHHRE
                     TAVQILAFHLENMQLVKFPGKQPLRTIVENAEAKKTTLTEWLNYNASSVSGSHLTYLD
                     FPTEFVWYESKKTELLGDDREWLAVLEEASVSATSSQLRSLFAHILSYCTVTNPLALW
                     ENHWKLMGDDIPLRAAANLNMPHLHINTNDLHNFVLYEVEIILNQCSKSIFDFALPSL
                     PVDLLEDLANHLIMEDRNYDRAVLNTERLELERQMNSKQKQIYDLITSASLNECTEHT
                     KGGKSAILGACITTSHLWQRFNVFILAENMRLLRPGLTPSMRVKNAEFSKWLLRVGNG
                     EIGLPDKEDPLNSHWVQIPDQFCIPDDENGLANLISFIYPCESLQNPSAVDLQQKAIV
                     CPKNDAADMINGLIVNMVDGPVRIYCSYDTATLHGNDGGEAELLYPAEYLNTLNYPGL
                     SPHELHLKKGVTAILLRNINIAGGLCNGTRMIITQMLAKSVEAEIITGTRVGEKVFFP
                     RMSLIHKEPMLPFILKRQKLPLKISYAMTINKSQGQPLNQIGVYLLKPLFGHGQLYVA
                     LSRATSPGGLKLLIKKHEDHGPNVTKNIVYTYCLSAITDLEAAPPARFAC"
     misc_feature    1699..2070
                     /gene="LOC139842503"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    <3262..3894
                     /gene="LOC139842503"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <4033..4152
                     /gene="LOC139842503"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    4063..4065
                     /gene="LOC139842503"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atgggtgata atgacgacat tgtgatgatc atggctgaag agtttgcttc tgcagttgca
       61 cacgctcctc caaggttgaa gtatactcat gtctggtgtt tcttagacgt accaaaaggg
      121 aatgttttgc gtttaccaaa agaacttctt gagaaagcac cggagttaaa gaaaggaaat
      181 tcttatcaat gcgttgacat agatgaccga gttcacacct gggggctttt ggaggagaag
      241 aacagaaaaa aaccccaact tgtgtgtttc ttctggctag aagaaatttg cagcaaaagt
      301 ttgaatttgc gtgggatgac gttcacaact tcgattgaca gtatgtgttt gggatgtttg
      361 ggtatggaag cagaggatag aggatttcaa gtttatgttt atgggcatgt gtatacgtgt
      421 ttatggggtc atgtttacag aaaactaact tccgttaatg tgctacgggg gttatatgac
      481 aaattagacg tgttaggtta cttagacgtg tgcctgatga cggttgagtc acaaaagttg
      541 tttaccattc ctagccttgt taattttttt gccttttcat tatttggcaa tttccgttat
      601 gaggagttct cgaaaaagga aaaaaactta gtgaattcga atgtagtggg tggtgttgtg
      661 ttagaaagtg ttggaccttc agacgtacaa gttgtttccg ataaacaatc taagaaaagg
      721 gcttctctac gtaaggcaca tgccagtgct tcgggttctt ctcatgtttc tgttagcttt
      781 tcccttcatg ctcagttgac acccatatat actatctttg catcttttga tgtgtcaggc
      841 gtatctcctt tatatcgtga ttctggggac tgcacatccg tttgtatgca gtgcggggct
      901 ttgttctggc gtgctgaaca tgttaagtca tatttctggg acaaacaact tcattatcat
      961 cgttgttgtg aaaatggtcg tgtctattta ccacgctatg aggatcctcc tggagaattt
     1021 aagcgtttgt tagaaactcc tgctttcctt gataatgttc gtgcctacaa ccagatgttc
     1081 agcatgatgt ccttttgcgc tcgtatcgat gaaaatatta acgatggtcg ttctccttac
     1141 gttttcaaga tctcgggcca aatttatcat tggctcggta gtatgtgccc tgaacagggg
     1201 agccccccca ggtttctgca gctttacatt tatgatacgg atcacgaagt tgaaaaccga
     1261 atgggccatt ttaggggccg tgattcaggc cggctttctg aagtagttgt tactcagttg
     1321 gtgaagttac ttgattcaaa taatgcacta gtcaagttgt ttcgcaccgc gagagataag
     1381 tgtgctggca gcgaggtacc tactttcaag gtttgcttgt atagtttgac ggggttaagc
     1441 caacatgcac tgcctacttc ggatgcaata ggcgctattg ttttttactc tgtcccacaa
     1501 tctatttctg attacgacgt gataatcgag cctcagtctc aacttcccag gcgagttaat
     1561 aagctgcatc cgctatatat gtcacttcaa ttcccgctga tgttcttttt tggtgaacct
     1621 agttttcacc cggatctgaa actgtgcgca gcgtcgggtt cgcaaggcgc ccgttatgtg
     1681 gtgacggcat attgcagcat cgagctcgac caaatggact acatcagaaa caagcagaac
     1741 gatatacggg ctgagtacct ttcagggttg tacgacgcta tcgatagagg tgataaaact
     1801 ggttctgatg tgagtagcat gacaattctt cccgcttcgt tcactggtgg accgcgctat
     1861 atgtacagcc attatctcga tgctctggca atttcacgca tttttagaaa accgacattt
     1921 tttgtaactt tcacgtgtaa tgcaaagtgg cctgaaattg ctcggtacct gaaacctttt
     1981 cctcacctat caccttcaga ccgagctgac atagtcgctc gtgtgttcca catgaagaaa
     2041 agagggctgc cgcattgcca cactttggtt tgggttcact cctcggtttc tgcagctatc
     2101 agggacaatt tagacgacta cataagtgca gaactgcatg acctgagaat tgattatccc
     2161 agttatgcag tcatatctgc aactatgatg catggcccat gtggccttgc caataagtgg
     2221 gcatcgtgca atcaaatttt tcatgttcaa aaaacttccc aaagaaatac attgacaaga
     2281 cgtactttga tgacaacggt cgtgctcact atcgccggcg taatactggc tcacataaat
     2341 gttaaatgtt gtggtacgac gagtctcatt aaatacatgt tcaagtatat ttcgaaaggt
     2401 accgaccgtg tggctgtttg tatagcaaaa cccatacgca gtgacagtca ccaatcacaa
     2461 cagcagacgc aaccggtaga tgaaattaaa aactttatag atgctctgtt catttgtcct
     2521 cacgaagcct gttggcggat ttttaacttc ccgattcatc atcgggaaac tgctgtccag
     2581 attctggctt ttcatcttga aaatatgcag ttggtgaagt ttccaggcaa gcaacccttg
     2641 cgtactattg ttgaaaatgc tgaagccaaa aaaactactc tcactgagtg gcttaattat
     2701 aatgcatctt cagttagcgg tagccacctt acatatttag atttcccaac cgaatttgtt
     2761 tggtatgagt caaaaaaaac tgagctactt ggtgatgata gagagtggtt agcggtacta
     2821 gaagaagcat ccgtatctgc cacgtcatct cagttacgct ctctttttgc acacattttg
     2881 tcttattgca ctgttacgaa cccacttgct ctttgggaaa atcactggaa actaatgggt
     2941 gatgatatac cacttcgtgc agctgccaat ttaaatatgc cccacttgca tataaatacc
     3001 aatgacctac ataactttgt cctgtatgaa gtagagatca ttttaaacca gtgttcgaaa
     3061 tcgattttcg atttcgcgtt accgtcgctg ccagttgacc tactcgaaga tttggccaac
     3121 catcttatca tggaggatag aaactatgat cgtgcagttt taaacaccga acgcctagaa
     3181 ctcgagcgtc aaatgaattc gaagcaaaag caaatttacg atcttataac aagcgcttcg
     3241 ttgaatgaat gcactgaaca tacaaaagga gggaaatcag ctatccttgg tgcttgtatt
     3301 acgacttcgc atttgtggca gcgattcaac gttttcatac ttgcagaaaa catgcgacta
     3361 cttaggccag ggcttacacc atcaatgagg gtgaagaacg cagaattttc aaagtggtta
     3421 ttgagggtag gaaatggtga aattggtctg cctgacaaag aagacccgtt gaatagtcat
     3481 tgggtacaaa tccctgatca gttctgtatc cctgatgatg aaaatggatt ggcaaatctg
     3541 atttctttta tatacccatg tgaatcgctg caaaatccat ccgcagtcga cctgcagcaa
     3601 aaagcaattg tctgtcccaa aaacgacgct gccgatatga taaacggctt aatcgtcaat
     3661 atggttgatg gtccagttag aatttactgc agctacgaca ctgcaactct acatggaaat
     3721 gacggtggtg aggcggagtt gctctaccct gcagaatatc taaatacgct gaactaccct
     3781 gggttgtcac cgcatgaact gcatttaaaa aagggtgtaa cggctattct gcttcgcaac
     3841 attaacatag caggtgggct ttgtaatggc acccgaatga taattacgca gatgttagcc
     3901 aagtcagtgg aagctgaaat aattacgggt acccgcgtcg gtgagaaggt ctttttccca
     3961 agaatgagcc ttatccacaa ggaaccaatg ttgccattca ttctgaagag acaaaaactc
     4021 ccattaaaaa tctcatacgc gatgactata aacaaaagcc agggtcaacc gctcaaccaa
     4081 attggagttt atctactaaa acctctattc ggtcacgggc agctctatgt tgcgctgtcg
     4141 agagctacat caccgggcgg tttgaaactg ctaattaaaa aacacgaaga ccacgggcct
     4201 aatgtaacta aaaatattgt ctacacatat tgtttgtccg caattaccga cttagaggca
     4261 gcaccacctg cacgtttcgc ctgctaa
//
LOCUS       XM_071832636            1557 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger BED
            domain-containing protein RICESLEEPER 2-like (LOC139842504), mRNA.
ACCESSION   XM_071832636
VERSION     XM_071832636.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1557
                     /gene="LOC139842504"
                     /note="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 23 Proteins"
                     /db_xref="GeneID:139842504"
     CDS             1..1557
                     /gene="LOC139842504"
                     /codon_start=1
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like"
                     /protein_id="XP_071688737.1"
                     /db_xref="GeneID:139842504"
                     /translation="MARDCLNLFSVEKKKVAALLKGNVGRICLTTDTWTSLQRVNYMC
                     LTAHYVDNEWVLRKKVLNFCPISSHRGVDIGKAVEMLDNASANDVAVAYLKGKFANWE
                     KSVLEGKWLHVRCTAHVINLIVQDGLSHIGKSVDCVRAAVKYIRQSPQRLRKFKEFAE
                     IEKCNSTKSLILDVPTRWNSTYLMLETAQKYERAFGRYDIEERHYREDLEKAGVPMYS
                     DWANVRRLAKFLEHFYELTLKVFGTLHVTANDFLDDITSIDATLNNCLYDNDKNLVAM
                     EHLMKAKFKKYYGGLENCNMATIVASVLDPRNKFEYVEVLLGDVYGNTEMKVMCAMIK
                     AALVELYEDYVRIHSSPDQSTMSDCYDRSSSSNKHSKSAVMEPSTHLKQKIRMEMKRR
                     KSKNGMQDLKSELDRYLNEEVEDDSEGFEVLNWWKVNSPRFRILSLVARDVMEIPIST
                     VASESVFSTSGRVLDAFRSSLTPHMVESLICTQDWFRDNAMAIELVENWDEMQRIEED
                     VEQYVFAHSE"
     misc_feature    724..1032
                     /gene="LOC139842504"
                     /note="Domain of unknown function (DUF4413); Region:
                     DUF4413; pfam14372"
                     /db_xref="CDD:433913"
     misc_feature    1210..1458
                     /gene="LOC139842504"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggctaggg attgtctgaa cttgttttct gtggaaaaga aaaaagttgc tgctcttctc
       61 aaaggtaatg tcggtaggat ctgtttaact actgacacat ggacttcact tcaaagagtc
      121 aactacatgt gtctcactgc acattatgtt gataatgagt gggttttaag gaaaaaagtc
      181 ttgaactttt gccctatttc tagtcatcga ggtgtggata ttggaaaggc tgttgaaatg
      241 ttagataatg ctagtgctaa tgatgtggct gttgcatatt tgaaaggtaa gtttgcaaat
      301 tgggaaaagt ctgttttgga aggaaaatgg ttacacgttc gatgtacggc tcatgttatt
      361 aatcttatcg tacaagacgg tttaagtcat attggcaagt ctgttgactg tgtaagggct
      421 gctgtcaagt atattcgtca gtctccacaa agattgagga aattcaaaga gtttgctgaa
      481 attgagaaat gcaacagcac taaaagtttg attctagatg tgcctactcg ttggaactca
      541 acttatttaa tgttggaaac agctcaaaaa tatgaacgtg catttggaag atatgatatt
      601 gaggagaggc attatagaga ggatcttgag aaggccgggg ttccaatgta ttcggattgg
      661 gcgaatgtga ggagattggc taagttcttg gaacactttt atgagctcac attaaaagtt
      721 ttcgggacat tgcacgtaac tgcaaatgat ttcctagatg atattacctc tattgatgca
      781 actttaaaca actgtcttta tgataatgat aaaaatcttg ttgcaatgga acacctcatg
      841 aaagctaaat ttaagaagta ttacggtggc ttggaaaact gtaatatggc aacaattgtt
      901 gcgtctgtgc ttgatccaag aaataagttt gagtatgtgg aagtgttatt gggtgatgtg
      961 tatggaaaca ctgaaatgaa agttatgtgt gccatgatta aagctgcttt ggtggaacta
     1021 tatgaagatt atgtaaggat tcattcctca ccagatcaat ctaccatgtc tgactgttat
     1081 gatagatcat catcatcaaa taagcattcc aaatccgctg tcatggagcc atcaactcat
     1141 cttaaacaga agattagaat ggaaatgaaa cgtcgaaagt ctaaaaatgg aatgcaagac
     1201 ttgaagtccg agttggatcg atatttaaat gaggaggttg aagatgattc agaagggttt
     1261 gaagttctga attggtggaa ggtaaatagt cccaggtttc gtattctttc tctcgttgca
     1321 agagatgtta tggaaattcc gatatccact gttgcttctg agtcagtttt tagcacaagt
     1381 ggaagagtgt tagatgcatt tagaagttct ctaactccac atatggttga gagcttaatt
     1441 tgcacacaag attggtttcg cgataatgca atggcaatag aacttgtaga aaattgggat
     1501 gagatgcaaa gaattgaaga agatgtggag cagtatgtat ttgctcattc tgaataa
//
LOCUS       XM_071832637             951 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842505), mRNA.
ACCESSION   XM_071832637
VERSION     XM_071832637.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..951
                     /gene="LOC139842505"
                     /note="uncharacterized LOC139842505; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842505"
     CDS             1..951
                     /gene="LOC139842505"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688738.1"
                     /db_xref="GeneID:139842505"
                     /translation="MIPKGPALANNPFCKSFHYDNQSLQMCRRFHPYDASTSTSKPNT
                     STAAKFLFDIMKKMGFGLKWRKWIESCFRPTSISVLINGSQKKEFNLQKGVRQGDLLS
                     PYLFIIASEGLNILSKILVKDDIIRGVEIGDNKIVISHIQFAKDTIFFGDWNKRNIRN
                     IHKTLICFQKLSGLRINFKKTYLYGVGVSKFTTENMAARLGCNTVWDNIIKLGVDMFD
                     AGINIEDQFVRIIGDGHDIQFWDDLWVGNNLLKSLFPQLHRLDSNSSCSVRERVTFAN
                     GVWSFNWAWKRMLTGRLLGEQDQLSAIIAGSADIGSGHSR"
     misc_feature    <262..570
                     /gene="LOC139842505"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    292..294
                     /gene="LOC139842505"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgataccta aaggacctgc tctagctaat aacccatttt gtaagagttt tcattatgac
       61 aaccaatcac ttcagatgtg tcgtcgtttt catccttatg atgcttctac ctctacttct
      121 aagcctaaca cctccactgc tgctaaattt ctttttgata tcatgaaaaa gatgggattt
      181 ggtcttaaat ggaggaaatg gattgaatcg tgttttcgcc cgacctctat ctcggtattg
      241 attaacggct cccagaaaaa agagtttaac cttcaaaaag gtgttcggca aggcgaccta
      301 ttatcacctt atcttttcat catcgcaagc gaaggtttaa acatcctctc caagattttg
      361 gttaaggacg atatcattag aggagtggaa attggggata ataaaatagt catctctcat
      421 attcaattcg ctaaagacac aatcttcttc ggtgattgga acaaacgcaa cattagaaac
      481 attcacaaga cacttatttg tttccaaaaa ctgtcgggat tgcgaattaa tttcaagaaa
      541 acttatctat atggtgtggg tgtttccaaa tttacaaccg agaacatggc tgctcgtttg
      601 gggtgcaata cagtgtggga caacatcatt aaacttggtg tggatatgtt tgatgctgga
      661 ataaacattg aagatcaatt tgtgcgaatt attggagacg ggcatgacat acaattctgg
      721 gatgacttat gggttggcaa caaccttctc aaatcgttat tcccacagtt gcatagactc
      781 gactctaata gttcatgttc ggttcgtgaa agggtaacat tcgctaatgg tgtttggtct
      841 ttcaattggg cgtggaaaag aatgttaaca ggaagattac taggcgagca agatcaacta
      901 tcggctatca tcgcaggttc ggccgatatt ggttcgggtc attcaagatg a
//
LOCUS       XM_071832638             471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842506), mRNA.
ACCESSION   XM_071832638
VERSION     XM_071832638.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..471
                     /gene="LOC139842506"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139842506"
     CDS             1..471
                     /gene="LOC139842506"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688739.1"
                     /db_xref="GeneID:139842506"
                     /translation="MVGKLIYLTHTRPDIAHAVGVVSQFMQQPQVYHMEAVIRIIRYL
                     KKTSDHGVVFKGNGHLKTQIYTDASWAGEKGDRKSTSGFFTLVGGNLVARRSKKQKVV
                     SLSSAESEFRGIAKGVVEALWIKKLLTEIVFPPKEAIQILCDNEAAIAISENPV"
     misc_feature    187..>468
                     /gene="LOC139842506"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(199..210,313..321,328..330,430..432)
                     /gene="LOC139842506"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggtgggaa aactcattta cctcactcat actcgaccag atatagcaca tgctgtagga
       61 gtcgtaagtc aattcatgca acaaccacaa gtttaccata tggaagctgt gattagaata
      121 atcagatact taaagaagac atcagatcat ggagtggttt tcaaaggaaa tggacattta
      181 aaaactcaaa tatataccga tgcaagctgg gctggagaaa aaggggatcg aaaatctaca
      241 tccggattct tcacacttgt cggaggtaat ctggtggcac ggagaagtaa gaaacaaaaa
      301 gttgtatctc tttcaagtgc cgagtcagaa tttaggggaa tagcaaaagg ggttgttgaa
      361 gcgctatgga tcaagaaatt gttgacagaa attgttttcc ctccaaaaga agccattcaa
      421 atcttatgcg acaacgaagc cgccattgcc atttcggaaa atccggttta a
//
LOCUS       XM_071832639             528 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842507), mRNA.
ACCESSION   XM_071832639
VERSION     XM_071832639.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..528
                     /gene="LOC139842507"
                     /note="uncharacterized LOC139842507; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842507"
     CDS             1..528
                     /gene="LOC139842507"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688740.1"
                     /db_xref="GeneID:139842507"
                     /translation="MSPNETTPVHHLSLRSVLEKEKLNDTNFLDWYRNLRIILKVEKK
                     SYILDGPVPEEPPANATKSIRDAWTKHMDDSTEVACLMLATMIPDLQKDLEHHDAFEM
                     LKQLKEMFQQQARQQRFETVRALHACKMTEGTSVSSYVLKMKSYIDQLERLGSSIGPE
                     LAIDLILNSLSKSYD"
     misc_feature    <367..>525
                     /gene="LOC139842507"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtcaccca atgaaactac acccgttcat cacctttctc taagatctgt cttagagaag
       61 gaaaaactca atgatacgaa cttcttagac tggtatcgta atttgagaat tattctcaaa
      121 gtcgaaaaga agtcgtatat acttgatgga cccgttcccg aggaaccccc tgctaatgcc
      181 actaagagca tccgagatgc ttggactaag catatggatg actccacaga ggtagcatgc
      241 ctcatgttag ccaccatgat tccagacttg caaaaggacc tggaacatca tgatgccttt
      301 gagatgctta agcagctaaa ggaaatgttc cagcaacaag ctaggcaaca acgctttgaa
      361 actgtcagag cgttacacgc atgcaagatg acagagggga catctgtaag ctcttatgtt
      421 ctaaaaatga agagctacat agatcaactt gagaggcttg gatcttccat tggtcctgag
      481 ttggcaatag acttgatcct caactcacta tcaaagtcat atgactag
//
LOCUS       XM_071832640             336 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842509), mRNA.
ACCESSION   XM_071832640
VERSION     XM_071832640.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..336
                     /gene="LOC139842509"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842509"
     CDS             1..336
                     /gene="LOC139842509"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688741.1"
                     /db_xref="GeneID:139842509"
                     /translation="MAVKNILKYLRRTKDMFLIYGGVEEDLTVKCYTYASFQTDRDDS
                     RSQSGYVFILNGGAITWKSSKQKVVAKSTTEAEYIAALEASQKAAWMKKFIADLGVMP
                     SIEDPIEIF"
     misc_feature    88..>333
                     /gene="LOC139842509"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggctgtca agaacatcct aaagtacttg agaaggacta aagatatgtt cttgatttat
       61 ggtggtgtgg aagaagatct tactgtaaag tgctacacat atgctagctt ccaaactgat
      121 agagatgatt cacgatcaca atctggatat gtctttatct tgaatggagg agctataact
      181 tggaaaagtt ctaagcagaa agtagttgca aaatctacta cagaagctga atacattgct
      241 gcattggagg catcacaaaa ggctgcatgg atgaaaaagt tcattgctga tttaggggtg
      301 atgccaagca tagaagaccc catagaaata ttttga
//
LOCUS       XM_071832641            2943 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 5'-3' exoribonuclease 3-like
            (LOC139842510), mRNA.
ACCESSION   XM_071832641
VERSION     XM_071832641.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2943
                     /gene="LOC139842510"
                     /note="5'-3' exoribonuclease 3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842510"
     CDS             1..2739
                     /gene="LOC139842510"
                     /codon_start=1
                     /product="5'-3' exoribonuclease 3-like"
                     /protein_id="XP_071688742.1"
                     /db_xref="GeneID:139842510"
                     /translation="MGVPSFYGWLVNKYPKIIVNAIEKTNDQDNGLLSNPNGIEFDNL
                     YLDMNGIIHPCFHPENDNVLEHASFPAVETYGEVFNNIFDYIDRIVNIVRPRKLIYMA
                     IDGVAPRAKMNQQRSRRFRNAKDQETLKKEEEKLRRQFENEGKEVLPEYESQVSDSNV
                     ITPGTEFMYELSKQLQSYIRLRIANNPPWKQLKVILSDANSPGEGEHKIMSFIRLQRT
                     CVGYNPNTNHVLYGLDADLIMLALATHEIHFSILRENVSVEDIRQSETKVIKITRFDL
                     DQSLKKTGEQISNLGISTYTKKRSLVKKKPYQFLHVWILREYLNLDLKTINTPEKFEL
                     DFERLIDDFIFICFFAGNDFLPHMPTLEIHEGAIDLLLYVYKEEFKNLGGYLVDMQKA
                     NDKKGSFIKLKRVEKFILAIGAFEDKIFKKRSSVHDKRLRHILSNLHHSGGNEGEDLF
                     PVTYTCNEKGSATTSSIVDLRGSSTRFPDHDQVLENTKMLKEKLKSYTREASDVWRNG
                     LVTDTVKFGSSGWKRRYYKHKFSADTDEDMEKMRKKVVEKYTEGLCWVLLYYFSHVPS
                     WTWFYPYHYGPFASDMKGLSSTKLVFQKGLPFKPFDQLMAVLPPKSAHALPVLYQLLM
                     TDEESSIHDFFPSDFDIDTDGKRFLWQGISKLPFIDEELLLTATKKIEKDLGEEEVKR
                     NVQDSDQLFLHSSESLASQIVSKINNVGSDKQSSSVKIDISGEINGFVCPKLESVKDS
                     SVLCVHYDPPSFRLHIPRVLEGTSIPETVVNESDIEERQLWHDIHGYQGRNQWSHNRT
                     EGATSNRPGVGTRNMYPDVVIQGAGSGWSGRGRGRVNDATRTIKEQTEGGQSRWNTRG
                     RGHQQRSGMINDPARTNKNQFWTVKTDLGSGQKKELNRWGDSQSKTCSGDNSDRRW"
     misc_feature    1..>2250
                     /gene="LOC139842510"
                     /note="5'-3' exonuclease [Replication, recombination and
                     repair]; Region: XRN1; COG5049"
                     /db_xref="CDD:227382"
ORIGIN      
        1 atgggtgttc cttcatttta cggatggctt gttaacaagt atccaaaaat aatagtaaac
       61 gcaatcgaga aaactaacga ccaagataac ggacttttga gtaacccaaa cggtattgag
      121 ttcgataact tatacctgga catgaacgga atcatccatc catgttttca ccctgaaaac
      181 gacaacgttc ttgaacatgc aagtttcccg gccgtagaaa catacggtga agttttcaac
      241 aatatatttg attacataga taggatcgta aatatcgtga gacccagaaa gctcatttac
      301 atggccatcg atggtgttgc tccaagagca aaaatgaatc aacaacgaag tagaagattt
      361 agaaatgcta aagatcaaga gaccctcaaa aaggaagagg agaaattaag aagacaattt
      421 gaaaatgaag gtaaagaggt acttccagaa tacgaatcac aagtttctga ttcgaatgtg
      481 attactcctg gaacagagtt tatgtatgag ttatcaaagc agcttcaatc ttatattcgg
      541 ttgcgaatag caaacaatcc accatggaaa caactgaagg tgatcctttc agatgcaaat
      601 tctcccggtg agggagaaca taaaattatg tcgttcataa ggcttcaacg gacttgcgtg
      661 ggttacaacc cgaacacgaa ccatgttttg tatggtctgg atgcagacct cattatgctg
      721 gctttagcaa cccatgagat ccatttctcc attttgagag agaatgtttc ggttgaagat
      781 atcaggcaat cagaaaccaa ggtaataaaa atcacaaggt ttgatctgga ccaaagtttg
      841 aaaaaaacgg gtgaacaaat tagcaaccta ggaatttcga catataccaa gaaaaggtct
      901 ctggtgaaga agaaaccgta ccagtttctt catgtttgga tactacgaga gtatctaaat
      961 ctggatctaa aaacaataaa tactccagaa aagtttgaat tggattttga acggctgatt
     1021 gacgatttca ttttcatatg cttctttgct ggaaatgatt tcctacccca tatgccaacg
     1081 ttggaaatcc atgagggtgc tatagatttg ctgctttacg tctataaaga agaatttaag
     1141 aaccttggag ggtatctagt cgacatgcaa aaggcgaatg ataagaaagg aagttttatc
     1201 aagttgaaga gagtcgaaaa gttcatcctt gctattggag cgtttgaaga taaaatcttc
     1261 aagaagagat cttcggtcca tgacaaaagg ttgagacata tactttcgaa cctccatcat
     1321 tcgggaggta atgaaggaga agacttgttt cctgtgacat atacatgtaa tgagaagggc
     1381 tcggctacta catcttctat tgttgattta cgaggcagca gtactagatt tcccgatcat
     1441 gaccaggttc ttgaaaatac taaaatgtta aaggagaaac tgaaatccta cacacgtgag
     1501 gcgtctgatg tttggaggaa tggacttgtt acagacacgg tgaaatttgg ttcatctggt
     1561 tggaaaagaa ggtattataa acacaagttt tctgccgaca cagatgagga tatggagaaa
     1621 atgagaaaga aagttgttga aaagtacact gaagggctct gttgggttct tctctactat
     1681 ttctctcatg tgccatcctg gacatggttt tacccctacc attacgggcc ctttgcgtcg
     1741 gatatgaaag gcctctctag cacaaagtta gtatttcaaa aaggattgcc attcaaacca
     1801 ttcgatcaac ttatggcggt tcttccacct aagagtgccc atgcactgcc ggttttatat
     1861 cagttactga tgactgatga agagtcgagt attcacgatt tcttcccttc cgattttgac
     1921 atcgacacag atggaaaaag atttctttgg cagggtatca gtaagcttcc ttttattgat
     1981 gaggagcttc ttcttactgc gacaaagaag atcgagaaag acctcggtga ggaggaagtt
     2041 aaaagaaacg tgcaagattc tgatcagtta tttctgcatt cttctgaaag tttagcttct
     2101 caaatagttt cgaaaatcaa caatgtggga tctgacaagc aaagtagctc ggtcaaaatt
     2161 gatataagtg gggagataaa tgggtttgtt tgccctaagc tagagtccgt taaagattct
     2221 agtgttctat gtgtacatta tgatccacca agctttcgtc tccatatccc tcgcgtgctt
     2281 gaggggacca gcatccccga aacagtggta aatgaatcgg acatcgaaga gaggcagcta
     2341 tggcacgaca ttcatggtta ccaaggcaga aaccaatggt cacataacag aaccgaaggt
     2401 gctacgagta acagaccggg tgttgggact aggaatatgt atcctgatgt cgttatccaa
     2461 ggtgctggaa gtggttggtc aggtagagga cgaggtagag ttaatgatgc tacgaggaca
     2521 ataaaagagc aaactgaagg aggtcagtct aggtggaaca ctcgaggacg aggtcaccaa
     2581 caaagatctg ggatgattaa tgatcctgca aggacaaaca agaatcaatt ttggacggtc
     2641 aaaacagatt tgggttcagg gcagaagaaa gagttaaatc gttggggcga ctcacaatcc
     2701 aagacgtgtt ccggggacaa cagcgatcgt agatggtgaa gatcgaaaat gtctgaaagt
     2761 taaattgaca catgtttttt gatggtatgt agtagcatgt atatgtatct tagtggtatg
     2821 tagtagcatg cttttttgat ggtgaagatc gaaatgtagt agcatgtgtt ttttatgcta
     2881 tgtagtagca tgttcattcg ataatgaaga tcgaaaatgt ttgaaaacta cattgacaca
     2941 tgt
//
LOCUS       XM_071832643            1602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842511), mRNA.
ACCESSION   XM_071832643
VERSION     XM_071832643.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139842511"
                     /note="uncharacterized LOC139842511; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842511"
     CDS             1..1602
                     /gene="LOC139842511"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688744.1"
                     /db_xref="GeneID:139842511"
                     /translation="MVSNCLFSTTILWLHILLITSANPTDWTNHGGDFLIHLRNRRYA
                     YGERKISLETVHSLTLKWKFVAGLDITATPAIYDNTIYFPCWNGNIYALNASNGSVIW
                     VKNLGKLTGLNPTGLVQGVNYTVSRATPTVADDLLIIGIYGPGYVIGIKRCNGDLVWS
                     TQLDTHYACVVTMSGTYFGSAFYVGTSSLEELVSIQKCCSFRGSFLKLNARNGKILWQ
                     TYMLPDNHGSIDEYAGAGVWGSSPSIDIIRNAIYIGTGNMYHAPLNVTQCQEAQNNQT
                     TPTEKDKCVVPDNHSNSILSLDLFSGHIKWYKQLGGYDVWFLACNNVTTLGCQPGPNP
                     DADFGEAPMILTIFVRGMMRDIVVAVQKSGIAWALDRNHGSIVWSTEAGPGGVAGGGT
                     WGSATDGKTVYTNIANSLKRNFTLKPSNNTTKSGGWVSIDATTGNVLWSTENPSKATA
                     TGPVSLANNVLFAGSTNGTGPIYAMSAATGKILWSYNTGATVYGGLSISNGCVYVGNG
                     YKLNYGVFFPSYTHGTTLFAFCIPL"
     misc_feature    67..1485
                     /gene="LOC139842511"
                     /note="Glucose dehydrogenase, PQQ-dependent [Carbohydrate
                     transport and metabolism]; Region: Gcd; COG4993"
                     /db_xref="CDD:444017"
ORIGIN      
        1 atggtgtcta attgcctctt ttcgactacc atcctttggt tgcatatcct gctcataacc
       61 tcagccaatc caactgattg gactaaccat ggtggagact ttctgattca cttgagaaac
      121 agaagatacg cgtacggtga aagaaagatt agtcttgaaa ccgtgcatag ccttactcta
      181 aaatggaagt ttgtcgctgg actcgatata actgccacac cagcaatata tgacaataca
      241 atctatttcc catgttggaa tggaaacata tacgcgctca atgcatcaaa tggttcagtt
      301 atctgggtaa agaatcttgg aaagctaacc gggcttaatc caacagggct cgtacaaggt
      361 gttaactaca ccgtgtcaag ggctacccct actgttgccg atgatctttt gattattgga
      421 atttatggac cgggttatgt tatagggatt aaacgttgca atggagacct tgtgtggtct
      481 acacaactcg atacgcatta tgcttgtgtt gtcaccatgt caggaacata ttttggaagt
      541 gccttctatg tgggaacatc ttcactagaa gaacttgtaa gtattcaaaa atgttgttca
      601 tttagaggga gttttttaaa gttaaatgcc agaaatggta aaatcttgtg gcaaacctac
      661 atgttgcccg ataaccacgg tagcatcgat gaatatgcgg gtgccggtgt atggggcagt
      721 agtccatcaa tcgatattat acggaatgca atctatattg gcactgggaa catgtatcac
      781 gccccattaa atgtcacaca atgccaagaa gcacaaaata atcaaactac accaactgaa
      841 aaagataagt gtgtggtacc agataaccat tcgaattcga tcctgtcact tgacttgttt
      901 tcaggacaca tcaaatggta taaacagcta ggtggttatg atgtctggtt tttggcttgt
      961 aacaatgtta ctacattagg gtgtcaaccc gggcctaatc cagatgcaga ttttggagaa
     1021 gcacctatga ttttaacaat ttttgtccgt ggtatgatgc gtgacattgt tgtagcggta
     1081 caaaagagtg ggattgcttg ggctttggat cgaaatcatg gtagcattgt ttggtctacg
     1141 gaagctggac ctggaggtgt tgctggagga ggtacatggg gatcggcgac agatggaaag
     1201 acggtttaca caaacattgc caatagtttg aaacgtaatt ttacattgaa accatcaaac
     1261 aacacaacaa aaagtggagg atgggtgtcg attgatgcca caactggcaa cgtcttgtgg
     1321 tcgacagaaa atccaagtaa agcaactgca acgggtcccg taagtttagc caataatgtt
     1381 ctgtttgctg gatcaaccaa tgggaccggg cccatttacg ctatgagtgc tgcaaccgga
     1441 aaaatattat ggtcgtataa cactggagca acggtatatg gtggtttgtc tataagcaac
     1501 ggttgtgtgt atgtgggaaa tggctacaaa ttaaattatg gagttttttt tccaagttac
     1561 actcatggaa caacattatt cgccttttgc attcccctgt aa
//
LOCUS       XM_071832644             810 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842512), mRNA.
ACCESSION   XM_071832644
VERSION     XM_071832644.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..810
                     /gene="LOC139842512"
                     /note="uncharacterized LOC139842512; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139842512"
     CDS             1..810
                     /gene="LOC139842512"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688745.1"
                     /db_xref="GeneID:139842512"
                     /translation="MAYGTTPDLFDEYIKIGEKMAALCLENFCQCVFHLFARQYLLKP
                     TAEDIARLYNFYAQKHGLPGMLGSIDYMHWEWKNCPIAWQGQYTIGDQKGPSIMLEAV
                     ASQDLWIWHAFFGMAGSNNDINVLYFSPLFNTIKDGTAPPSPFEVNSHRYERGYYLGD
                     GIYPEWAMLGRFLMLKTPARSIDFNKIRRHMYACVVLHNMIQENNGFVIGRREERMIQ
                     RNPTRHLELNLRDRDAMIKEIRDKQVHKQLESDLTEHVWNLSPYFRNANGA"
     misc_feature    115..618
                     /gene="LOC139842512"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcgtatg gaacaactcc tgatttgttt gatgaatata taaaaattgg ggagaaaatg
       61 gctgcattgt gtcttgaaaa tttttgtcaa tgcgtatttc atttgtttgc tagacagtat
      121 ttgctaaaac caactgccga agatattgct agactttata atttttatgc acaaaaacat
      181 ggtttaccgg gtatgttagg tagtatcgat tatatgcatt gggagtggaa gaattgtccc
      241 attgcttggc aaggacaata cacaataggt gatcagaaag ggccttctat tatgcttgag
      301 gcagtcgcct cacaagattt gtggatatgg catgcattct ttggtatggc aggttcgaac
      361 aacgacatta acgttttgta tttttctcca ttgtttaaca ctataaaaga tggaacagct
      421 ccaccttcac cctttgaagt aaacagtcat cgctacgaaa gagggtatta cttaggtgat
      481 ggtatatacc cagaatgggc tatgttgggt agatttttaa tgctaaaaac tccggcaaga
      541 tctatagact tcaacaaaat tagaagacat atgtatgctt gtgttgttct acataacatg
      601 attcaagaaa ataacggttt tgttattgga cggcgagaag aaagaatgat acaaaggaac
      661 ccaacaagac atttagaact gaatttgagg gatcgagatg caatgattaa ggaaataaga
      721 gataagcaag ttcacaaaca gttggagtca gatttaaccg agcacgtttg gaacttatca
      781 ccttactttc gtaatgctaa tggtgcgtag
//
LOCUS       XM_071832645             465 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842513), mRNA.
ACCESSION   XM_071832645
VERSION     XM_071832645.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..465
                     /gene="LOC139842513"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139842513"
     CDS             1..465
                     /gene="LOC139842513"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688746.1"
                     /db_xref="GeneID:139842513"
                     /translation="MEAERPAKTSLSGNHGISPDCEGAKVDQTLYREIIGSLMCLTAS
                     RPDIMFAVCSCARYQANPNVHHMLVVKKHLRYLKDKPSLGLWYPCDDGFKLTTYSDSD
                     YGGCKKDFKSTSGGCQFLGSRLVTWQCKKQTAMSDIPPIIVDLESNSDSSTV"
     misc_feature    286..>399
                     /gene="LOC139842513"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggaagctg agagaccggc taagacttcg ttgtcgggga atcacggtat ttcaccagat
       61 tgtgaaggtg ctaaggtgga tcagactctg tacagggaaa taattgggtc tctaatgtgt
      121 cttacagctt ctcgaccgga tattatgttt gcagtttgct cgtgtgctcg ttatcaagcg
      181 aacccaaatg ttcatcatat gctcgtggtt aaaaagcatc tgagatattt gaaagataaa
      241 ccaagtttgg ggttatggta cccatgtgat gatggtttta agcttacgac atatagtgat
      301 tcagactatg gcggatgcaa gaaagatttc aagtcaactt ctgggggatg tcaatttttg
      361 ggaagcagat tagttacttg gcaatgtaag aagcagacag caatgtcgga cataccgcct
      421 attatcgtcg atttggagag taactcagat tcatctactg tttaa
//
LOCUS       XM_071832646            1631 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842514), partial mRNA.
ACCESSION   XM_071832646
VERSION     XM_071832646.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..1631
                     /gene="LOC139842514"
                     /note="uncharacterized LOC139842514; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842514"
     CDS             <1..1545
                     /gene="LOC139842514"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688747.1"
                     /db_xref="GeneID:139842514"
                     /translation="SSQASHPDWPNHGGDLRNRRYAYGETKISAATVANLKLKWKFVA
                     GKDISATPAIYNNTIYVPSWNGKIYALDALDGSVIWQQEIGELTGFNSASTVGVVVGV
                     NWTVSRSTPTVADEILIVGLYGPAYVVGLKRSNGELVWSKQLDTHNYSLITMSGTFYK
                     SAFYVGTSSLEESLSIESCCTFRGSFSKLNAKNGNIIWQTYMLPNNYGSKDEYAGAAL
                     WGSSPSIDKHRNTVYIATGNLYSAPLNVTQCQEAQNNQTTPTEKDKCIEPENHSNSIL
                     ALDLYSGDIKWYQQLGGYDVWFRACNNLSTSGCPPGPNPDADFGEAPMILTVNSHGNK
                     HDIVVAVQKSGFAWALDRDNGSIVWSKEAGPGGPGGGGTWGSATDGETVYTNIANSGR
                     RNFTLKPSNTTTTSGGWVSMDGTNGNILWSTANPSNATASGPVSLANGVLFAGSTNGS
                     GPIYAMSAATGKILWSYKTGASVYGGMSISNGCIYVGSGYKVSVGLYNPAYTPGTTLF
                     AFCILP"
     misc_feature    22..1530
                     /gene="LOC139842514"
                     /note="Glucose dehydrogenase, PQQ-dependent [Carbohydrate
                     transport and metabolism]; Region: Gcd; COG4993"
                     /db_xref="CDD:444017"
ORIGIN      
        1 tcatcacagg caagtcatcc tgattggcca aaccatggtg gcgatttaag aaatcgtaga
       61 tacgcatatg gtgaaacaaa gattagcgct gcaactgtgg ctaaccttaa gctgaagtgg
      121 aaatttgtgg ctgggaaaga tataagtgca acaccagcaa tatacaacaa caccatatat
      181 gttcctagtt ggaatggtaa aatatatgca cttgacgcgt tagacgggtc agttatttgg
      241 caacaagaaa tcggcgagtt aacaggattt aactcggctt caactgtagg tgtcgtagta
      301 ggagtgaatt ggaccgtgtc caggtccact ccgactgttg ctgatgaaat tttgatcgtt
      361 ggattatatg gaccggctta cgttgtagga cttaaacgta gcaatggcga gctcgtttgg
      421 tctaagcagc tcgatacaca taattattct cttatcacca tgtctggaac tttttataaa
      481 agcgctttct atgtgggaac ttcatcgcta gaagaaagtt taagcattga atcatgttgt
      541 acatttagag gtagtttctc caaattaaat gccaaaaatg gcaacatcat atggcaaacc
      601 tacatgttgc caaacaatta cggtagcaag gacgaatacg ctggtgccgc cttatggggc
      661 agcagtccgt ccatcgacaa acaccgcaac acagtctata ttgccactgg taacttatat
      721 tcagccccac taaatgtcac acaatgccaa gaagcacaaa acaatcaaac aacacctaca
      781 gaaaaagata aatgcataga gcccgaaaac cattcaaatt caatcctagc gctcgatttg
      841 tattcagggg atattaaatg gtatcaacag ttaggaggtt acgatgtatg gtttcgtgct
      901 tgtaataatc tttcaacttc agggtgtccg cctgggccta atccagacgc agattttggt
      961 gaagcaccaa tgatattaac cgttaatagt catggaaaca agcatgatat tgtggttgct
     1021 gtacaaaaaa gtgggtttgc gtgggctttg gatcgtgaca acggtagtat tgtatggtct
     1081 aaggaagcgg gacctggagg gcccggtgga ggaggtacat ggggatctgc aaccgatgga
     1141 gagacggttt acaccaacat tgccaatagt ggacgaagaa actttacgtt aaagccatca
     1201 aatactacaa cgactagcgg tggatgggtg tcaatggatg gcacgaacgg caatatatta
     1261 tggtcaaccg caaatccaag taatgcgact gcaagtggcc ctgtgagctt agccaatggc
     1321 gttttgtttg ctggatcaac taacgggagt ggacctattt atgctatgag tgctgcaacc
     1381 ggaaaaattt tgtggtccta caaaaccgga gccagtgtgt atggtggcat gtccataagc
     1441 aatggttgca tttatgttgg aagtggttac aaagtaagtg taggacttta taatcctgct
     1501 tacactcctg gaacaacatt atttgccttc tgcattcttc catagcaaca atagattgta
     1561 taaaaataaa aattaaatac agagatggat atggttatgt attgtttaac gatagcatga
     1621 taatagaatt a
//
LOCUS       XM_071832647             447 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842515), mRNA.
ACCESSION   XM_071832647
VERSION     XM_071832647.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..447
                     /gene="LOC139842515"
                     /note="uncharacterized LOC139842515; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842515"
     CDS             1..447
                     /gene="LOC139842515"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688748.1"
                     /db_xref="GeneID:139842515"
                     /translation="MVKAYRGSDFEDHLSVFRRTLRASYNYLEQVGFHKWSRSRAEHV
                     RYSYLTSNSVESVNALSKHARKLPVCMLFEFFRASVQDWYFKHRNQSISLTSTVTPYA
                     ECKLGKRTRKSRRWQAIPSTNNLIEVRDGRKNGMVNLDDKVCSCGQ"
ORIGIN      
        1 atggtgaaag cttaccgtgg gtcggatttt gaagatcatc ttagtgtatt tcgaagaaca
       61 ttgagagcgt cttacaatta tttagaacaa gttggtttcc acaaatggtc cagaagtaga
      121 gctgaacatg ttaggtattc ataccttact agcaacagtg tagagtctgt taacgcacta
      181 tccaaacatg ctcgaaaact acctgtttgc atgttgtttg agttttttcg tgcttcagta
      241 caagattggt atttcaaaca tcgcaaccag tcgattagtc ttacttcaac ggttacccca
      301 tatgccgaat gtaaactagg caagaggacg agaaaatcta gaagatggca agcaattcca
      361 tcgacaaaca atctaataga agtgcgagat ggcagaaaaa atggaatggt taatctcgac
      421 gataaagtat gttcatgtgg gcagtga
//
LOCUS       XM_071832648             555 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842516), mRNA.
ACCESSION   XM_071832648
VERSION     XM_071832648.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..555
                     /gene="LOC139842516"
                     /note="uncharacterized LOC139842516; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842516"
     CDS             1..555
                     /gene="LOC139842516"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688749.1"
                     /db_xref="GeneID:139842516"
                     /translation="MGSIEIIDSVFQNCRLEFNDCMFFANLFPMTMHDFDIILGMDWL
                     SRHHANIDCYSKRILFGNHSIPDCVFNGDLPVKSIKVISALKAQKLISHGCVGYLASI
                     QNLSIESPSLENIYVVQEFPDVFPDELQGLPPVREVEFSIDLIPGSQPISKAPYRMAP
                     LELQELKEQLQELIDCGFIRPTAC"
     misc_feature    <40..186
                     /gene="LOC139842516"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atgggtagta ttgaaattat agatagtgtg tttcaaaact gccgtttgga attcaatgac
       61 tgcatgtttt tcgcaaatct ctttcctatg accatgcatg actttgacat tattcttggc
      121 atggattggt tatctcgcca tcacgcgaac atcgattgtt attctaagag gattttgttt
      181 ggaaatcatt ctatacccga ttgtgtcttt aatggtgatc ttcctgtaaa atctattaaa
      241 gttatctcag cgcttaaggc gcaaaagctc atttcacatg gttgtgttgg ttatttagct
      301 tcaattcaga atttgtctat cgagagtcct tcgcttgaaa atatttatgt tgttcaagag
      361 tttcccgatg tatttcctga tgaattgcag ggtttgcctc cagtccgtga agttgaattt
      421 tcgattgatt tgattccggg ttcccaaccg atatcaaaag ctccttatcg tatggcacca
      481 ctcgagctgc aagaactcaa ggagcaattg caagaattga tagattgtgg ttttattcgg
      541 ccaactgcgt gttaa
//
LOCUS       XM_071832649             483 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842517), mRNA.
ACCESSION   XM_071832649
VERSION     XM_071832649.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..483
                     /gene="LOC139842517"
                     /note="uncharacterized LOC139842517; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842517"
     CDS             1..483
                     /gene="LOC139842517"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688750.1"
                     /db_xref="GeneID:139842517"
                     /translation="MATVTGRRIRNFFWEDIVCRLGISNEIVSDNGTLFEGEPFKSWC
                     QELNIKQSFTSVAHPQANGQCEVTNRDIVKGIKARLGLYGNEWVNELPSVLWAHRTTH
                     KNITGETPFSLVYGTEAVIPAELMVPMKRIRSFNESSNHEGLRTNLDILEERREIATI
                     "
     misc_feature    <37..342
                     /gene="LOC139842517"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atggcaacag ttaccggcag gcgcatccga aacttctttt gggaagatat tgtgtgtagg
       61 cttggtatct ccaatgaaat tgttagcgac aatggtactc tgtttgaagg cgagcctttt
      121 aagagctggt gtcaggagct gaatattaag cagtctttca cttcggtcgc gcacccacag
      181 gccaatggcc aatgtgaagt aacaaaccga gatattgtaa aggggataaa ggcacgcctg
      241 gggttgtatg gtaatgagtg ggtcaatgag ctcccgagtg ttttatgggc gcaccgtacc
      301 actcataaaa acatcacagg agaaacaccg ttcagcttgg tctacggaac tgaagcggta
      361 atccctgcag aattaatggt tccaatgaag cgcatacgta gctttaacga gtcaagtaac
      421 catgagggct tgcgcactaa tttggatatt ctagaagagc gcagagaaat agctaccata
      481 tga
//
LOCUS       XM_071832650             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842518), mRNA.
ACCESSION   XM_071832650
VERSION     XM_071832650.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139842518"
                     /note="uncharacterized LOC139842518; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842518"
     CDS             1..603
                     /gene="LOC139842518"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688751.1"
                     /db_xref="GeneID:139842518"
                     /translation="MVMWRDLNGSKCEFSISQVWEYLRPRAAHVPWYSVIWFSHCILR
                     HAFVLWLLMGERLKTHDRLKAWEIHHGTIIVCPLCNLVRDTQDHLFFSCPFASQVWTL
                     VLQHIDFPISSHAWKDFAWLLSPFAKRNIARFVIIKLLFAASVYFIWQERNRRIFKKG
                     NRSPAQVYEVIYATVRLKLMSFKWKSSASALRLKSDWKVS"
     misc_feature    40..297
                     /gene="LOC139842518"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtaatgt ggagagatct taatgggtct aaatgtgaat tttccatctc gcaagtatgg
       61 gaataccttc ggccgcgtgc tgctcatgtt ccatggtatt cggttatttg gttctctcat
      121 tgtattctga gacatgcgtt tgtcctttgg ttacttatgg gggaaagatt gaagactcac
      181 gatagattaa aagcttggga aattcatcat gggaccatca ttgtgtgtcc gttatgcaat
      241 ttggttcgtg acacacaaga tcatctattt ttttcctgtc cttttgcatc gcaagtgtgg
      301 actttagtgt tgcagcatat tgattttcca attagttcac atgcttggaa ggattttgct
      361 tggttactgt ctccttttgc aaaacggaat attgctagat tcgttataat caagttgcta
      421 tttgcggcgt ctgtttattt tatttggcaa gagcggaaca gaaggatctt caagaagggt
      481 aatcgatccc cggcccaggt ttatgaggtg atttatgcta cagttcgttt aaaactgatg
      541 agtttcaaat ggaagtcttc agctagtgcg cttaggctca agtctgattg gaaagtgtca
      601 tga
//
LOCUS       XM_071832651            1323 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842519), mRNA.
ACCESSION   XM_071832651
VERSION     XM_071832651.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1323
                     /gene="LOC139842519"
                     /note="uncharacterized LOC139842519; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842519"
     CDS             1..1323
                     /gene="LOC139842519"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688752.1"
                     /db_xref="GeneID:139842519"
                     /translation="MKAKKSLAKGCDSFLAYVIVAKKEKKTVAGIPVVRDFPEVFPDE
                     LPGLPPVREVEYRIDLMPGSTPVAKAPYRYGHYEFLVMPFGLTNAPAIFMDLMNRVCR
                     QFLDKFVIVFIDDILIYSKTESEHADYLCQEKAFQTLKQLLCQAPILALPEGTDDFMV
                     YCDASYAGLGCVLMQREKVISYASWQLKTHEKNYPKGHDMIWVIVDRLTKSAHFLPAS
                     ETTSLSKLAQLYINEVVVRYGIPLSIVSDRNSRFVSNFWQSLQQNLGPEIVQQTADKV
                     AIAREKLKAARDRQKMYADPRRRPVTFSVGEHVYLKVSPWIGVICFGKRGKLAPRYIG
                     PFNIRQILNDQTVVLDLPAELAGIHDTFNICYLRKCKVDDEIQILPLQDLKVDMNKKL
                     VEEPVRVVNRKVTRLRKKQIPMWGMGFPHYEETSIEYILLDYKDQDKA"
     misc_feature    <217..423
                     /gene="LOC139842519"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    253..255
                     /gene="LOC139842519"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238185"
     misc_feature    394..>585
                     /gene="LOC139842519"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atgaaagcta agaaatcgtt agccaaggga tgtgattcgt ttctagcgta tgtaattgtt
       61 gctaagaaag agaaaaagac ggtagctggt attccagtag tgcgcgactt cccagaagta
      121 tttccagatg aattaccggg tttgccacca gttagggaag tagaatacag aattgacttg
      181 atgccaggat ctacaccagt ggctaaagct ccttataggt acggtcacta tgagtttttg
      241 gtgatgcctt tcgggttaac gaatgcgcca gcaattttta tggatttaat gaatcgggtg
      301 tgtcgacagt ttctcgataa gtttgtcata gtatttattg atgacattct gatctattca
      361 aagacagagt ctgagcatgc tgattaccta tgtcaagaga aagcatttca aacattgaag
      421 cagctattgt gtcaagctcc gatattagcg ctacccgagg gtactgatga ttttatggta
      481 tattgtgatg cgtcatatgc gggtttgggt tgtgtgttaa tgcagcgaga gaaggttatt
      541 tcatatgctt cgtggcagtt gaaaactcat gaaaagaatt atccaaaggg acatgatatg
      601 atctgggtga ttgttgatcg attaaccaag agcgcacact ttttgcctgc tagtgaaacg
      661 acatcgttga gtaaattggc tcagctgtac ataaatgaag ttgtagttcg gtatgggata
      721 ccattatcta ttgtgtcaga taggaattcg agatttgtat ctaacttctg gcagagttta
      781 caacaaaatt tgggtcctga aattgtacaa caaaccgctg ataaagttgc aatagctcga
      841 gagaagttaa aagctgctag agatagacag aaaatgtacg cagatcctcg tagacgacca
      901 gtgacatttt ctgtgggtga acacgtgtac ctgaaggtat cgccgtggat aggtgtaatt
      961 tgttttggta aacgcggaaa attagctcca aggtatatag gtccatttaa catcaggcag
     1021 atattgaacg atcaaaccgt ggttctagat cttcctgcag agttagctgg tattcacgat
     1081 acatttaaca tatgttatct tcgtaagtgc aaggtagacg acgaaattca gattctgccg
     1141 ttgcaggact taaaagttga catgaataaa aagttagttg aagaaccagt cagggttgtt
     1201 aacagaaagg ttaccaggtt acgtaagaaa cagataccaa tgtggggaat ggggtttcct
     1261 cactatgaag aaacctcaat tgaatatata ctccttgatt acaaggatca agacaaggct
     1321 tga
//
LOCUS       XM_071832652            1053 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GDSL esterase/lipase
            At5g33370-like (LOC139842520), mRNA.
ACCESSION   XM_071832652
VERSION     XM_071832652.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1053
                     /gene="LOC139842520"
                     /note="GDSL esterase/lipase At5g33370-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 42 Proteins"
                     /db_xref="GeneID:139842520"
     CDS             1..1053
                     /gene="LOC139842520"
                     /codon_start=1
                     /product="GDSL esterase/lipase At5g33370-like"
                     /protein_id="XP_071688753.1"
                     /db_xref="GeneID:139842520"
                     /translation="MGISDTPKVNQPRPFYVFGDSLVDNGNNNFLYTTARADMPPYGI
                     DTPSHLPNGRFSNGLNIPDIISEYIGSEPVLPYLSPELTDEKLPMGANFASAGIGILN
                     DTGIMFANTIRMPKQILYFKDYQQRLSALLGEKQAKQLVNKGLVLVSLGGNDFVNNYF
                     LTPFSARSFQYSLPDYVTYVISEYRNILMTLYDLGVRRAILMGPGPLGCAPAMRARRS
                     LDGQCATSPQAAAELFEPQLYQMVQDLNNQLGSHVFITAHTKLMHEDIFSNPQAFGFE
                     NSDTACCGQGRFNGMGVCTPLSSLCDNRDKFVFWDAFHPTERANRFIVQQMMNGTFDY
                     MRPMNINTIMYLDSNL"
     misc_feature    43..990
                     /gene="LOC139842520"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; Region:
                     SGNH_plant_lipase_like; cd01837"
                     /db_xref="CDD:238875"
     misc_feature    order(61..63,289..291,457..459,931..933,940..942)
                     /gene="LOC139842520"
                     /note="active site"
                     /db_xref="CDD:238875"
     misc_feature    order(61..63,931..933,940..942)
                     /gene="LOC139842520"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     misc_feature    order(61..63,289..291,457..459)
                     /gene="LOC139842520"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
ORIGIN      
        1 atgggcatca gcgatacacc aaaagtaaac caacctcgac cattttatgt gtttggtgac
       61 tctttggtcg acaacggaaa taacaacttc ttgtatacaa ctgcacgagc cgatatgccg
      121 ccttatggca tcgacactcc ctcacatcta cccaacggtc gattttccaa cggcctcaac
      181 attcccgata ttatcagtga atatattgga tcagagcctg tgctacctta tttgagtcca
      241 gaattgacag atgagaagct tccaatgggt gcaaactttg cttctgctgg tattggaata
      301 ctcaatgata caggaattat gtttgcaaac acaattagaa tgcctaaaca aatactatac
      361 ttcaaggatt accaacagag actaagtgct ttacttggtg aaaaacaggc caaacagctt
      421 gtaaacaaag gcttagttct tgtttcttta ggtggcaacg atttcgtcaa taactatttc
      481 ttgactccct tctccgctag atcttttcaa tattcgcttc ctgattacgt aacctatgtt
      541 atatctgaat atcgcaacat tttaatgacg ttgtacgatt tgggagttag aagggcgata
      601 ctgatgggtc ctggaccgtt agggtgtgca ccagcaatga gggcacgacg cagtctagat
      661 ggtcaatgtg caactagtcc tcaagctgca gccgagttgt ttgaaccaca actttaccaa
      721 atggttcaag accttaataa tcaattaggc tctcatgttt ttattacagc ccacaccaaa
      781 ctgatgcatg aggatatctt ctcaaatcct caagccttcg gatttgaaaa ctcagacaca
      841 gcatgttgtg gacaaggacg tttcaacggt atgggtgtat gcaccccgtt atcatcattg
      901 tgtgacaaca gagacaagtt cgtgttttgg gacgctttcc atccaacaga acgagcaaac
      961 agatttatcg ttcaacagat gatgaacggc acatttgact acatgagacc catgaacata
     1021 aacacaatca tgtaccttga ctccaacttg taa
//
LOCUS       XM_071832653            1224 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842521), mRNA.
ACCESSION   XM_071832653
VERSION     XM_071832653.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1224
                     /gene="LOC139842521"
                     /note="uncharacterized LOC139842521; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842521"
     CDS             1..1224
                     /gene="LOC139842521"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688754.1"
                     /db_xref="GeneID:139842521"
                     /translation="MATANCDALVLGSDTRPPMLFEGLFDEWKRRFDNFIDGKGEQTK
                     YLWESFLNGPKISLHPDTGAVLKPYELQGEEAKRAQADIDSRSIIMQALPHDMYKSVS
                     SLKSGKELLDEITRQQEGYSQSDQTKLDIALAMYEDYFQKLDEPLKDCYRHFCEVINE
                     LKKVGMKKENHELNMKFLKKLNATWTPYGKNFRASKNTKKVLYGASHVLAAQNPKSNL
                     TETSDPMALFVNKSSTKTPSNCSNSLKAKQTISSDEDTYSDVDEEHRDLVKAATMFSK
                     QLNLRRSSGGFSKNHNNRTSSSSSYYKKPETSTTQYRAPDNKDPNNVCFNCGKIGHFA
                     RECRLPKQKDAEYYKKKMLLAQDAEKGKVLKASDDVWLNWSDSEQEPERANVVKLTNM
                     NCAPDNVSSDDEEEV"
     misc_feature    967..1014
                     /gene="LOC139842521"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
ORIGIN      
        1 atggctactg caaactgtga tgctttggtc ctgggctcgg atacccgtcc tcccatgctg
       61 ttcgagggac tatttgacga atggaaacga aggtttgaca acttcatcga tggaaaagga
      121 gaacaaacca aatacctctg ggaatcattt ctcaatggac ctaagatctc acttcaccct
      181 gacaccggcg cggttctaaa accctatgaa ctccagggtg aagaagccaa gagagctcaa
      241 gccgatatcg attccaggtc cattatcatg caagcccttc ctcatgacat gtacaagtcc
      301 gtcagctctc tgaaatctgg aaaagaactt ctagatgaaa tcacccgtca acaggaagga
      361 tacagccaat ccgatcagac aaaacttgac atagctctcg caatgtatga ggactacttt
      421 cagaaacttg atgaacctct aaaggactgc tacaggcatt tctgtgaagt cattaatgag
      481 ctaaagaagg ttggaatgaa aaaggaaaat catgagctga acatgaaatt tctgaagaaa
      541 ctaaatgcca cctggacacc atacggaaaa aactttcgtg cctccaaaaa caccaagaag
      601 gttttgtacg gggcatcaca tgttctagcc gcccaaaacc ctaaatctaa cctcactgaa
      661 accagtgatc ctatggctct gtttgttaac aaaagctcca ccaaaacccc ctccaactgc
      721 tccaactcac tcaaagcaaa acaaaccatt tcatctgatg aggacacata ctctgatgtt
      781 gatgaagaac atcgagatct cgtcaaggct gccacaatgt tcagcaagca actgaatctc
      841 aggagatcat ctggaggttt tagcaaaaac cacaacaatc gaacctcatc cagctcgtca
      901 tactacaaaa aacccgaaac ctcaaccact caataccggg ctcctgacaa caaggacccc
      961 aataatgttt gtttcaactg tggtaaaata ggtcactttg cacgagaatg cagactaccc
     1021 aaacaaaagg atgccgagta ctacaagaaa aagatgttgc tcgcccaaga tgccgaaaag
     1081 gggaaggtcc tcaaagcctc agatgatgtt tggctaaact ggtcagacag tgaacaggag
     1141 cccgaacgag ctaatgtagt gaaactcacc aacatgaact gtgctcctga caatgtttct
     1201 tccgatgacg aggaagaggt atga
//
LOCUS       XM_071832654            1134 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842522), mRNA.
ACCESSION   XM_071832654
VERSION     XM_071832654.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1134
                     /gene="LOC139842522"
                     /note="uncharacterized LOC139842522; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842522"
     CDS             1..1134
                     /gene="LOC139842522"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688755.1"
                     /db_xref="GeneID:139842522"
                     /translation="MEQKFENLNYSEGCFMQRPPLLESEGFCYWKQRFETYVCAKDID
                     FWNIITKGNYVPTTLNDDRKTRTIVPEENWSKEHKECVSKNYQAKLVLFNALPRKEYE
                     RVFMLDTAKEIWDSIIITHQGNSQVIENKTELLIAQYEQFAILDNEKIDSAYARFNNT
                     CSSLKALGTMYTNKQYVRKFLRALPSKWRPKVTAIDESKDLEKLTLDELMGNLKVHEV
                     ILEKDEEADKIKKEKFKSIALKAKANEECEYDDDDDDILNDSEQLAFIVRSFKKFYRR
                     PGNNVRAPMDSRKAPFEPKKKFVRKCFGSGDPNHLISECPKRKNEKAFLGGAWDDEEE
                     ETQDEEKEACLMAIESLNSEDNKETCLVGQTKSEVSPNLLNLT"
     misc_feature    274..651
                     /gene="LOC139842522"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggaacaaa aatttgagaa cttgaactat agtgaaggtt gcttcatgca aaggcctcca
       61 ctacttgaga gtgaaggatt ttgctattgg aagcaaagat ttgaaactta tgtttgtgct
      121 aaagatatag acttttggaa cataataact aaaggaaact atgtcccgac tacgttaaat
      181 gatgatagaa aaactaggac aatagtaccc gaagaaaatt ggtctaagga acataaagaa
      241 tgtgtaagta aaaactatca agccaaacta gttttattca acgctttgcc taggaaagaa
      301 tatgaaagag tttttatgct tgatacggct aaagaaattt gggatagtat tattatcacc
      361 catcaaggaa attcacaagt gatagaaaac aaaacagaat tacttatagc tcaatatgaa
      421 caatttgcta ttttagataa tgagaaaatt gatagtgctt atgctagatt taacaatact
      481 tgttcaagtc taaaagcttt aggtactatg tatacaaaca agcaatatgt tcgaaagttt
      541 ctaagagcct tgccctcaaa atggagaccc aaagtaacgg ccatagatga atcaaaggat
      601 ctagagaaac taacccttga tgaactcatg ggaaatctta aagtccatga ggtcatcttg
      661 gaaaaagatg aagaagcgga taagatcaag aaagaaaagt tcaagtcaat tgctttgaaa
      721 gccaaagcaa atgaagagtg tgagtacgac gatgatgatg atgacattct aaatgatagt
      781 gaacaacttg catttattgt tcgatcattt aagaagtttt atcggagacc gggaaataac
      841 gttcgtgctc caatggactc aagaaaagct ccatttgaac ccaaaaagaa gtttgtaaga
      901 aagtgtttcg ggtctggtga tccaaatcac ttgataagtg aatgtcccaa gaggaagaat
      961 gaaaaagctt ttcttggagg agcatgggat gatgaggaag aagaaactca agatgaagag
     1021 aaggaagcat gtctcatggc aatcgaaagc ttaaactctg aggacaataa agaaacgtgc
     1081 ttggttggtc aaaccaagag tgaggtatct ccaaaccttt tgaatttaac atag
//
LOCUS       XM_071832655            1650 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides abietadienol/abietadienal
            oxidase (LOC139842523), mRNA.
ACCESSION   XM_071832655
VERSION     XM_071832655.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1650
                     /gene="LOC139842523"
                     /note="abietadienol/abietadienal oxidase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:139842523"
     CDS             1..1650
                     /gene="LOC139842523"
                     /codon_start=1
                     /product="abietadienol/abietadienal oxidase"
                     /protein_id="XP_071688756.1"
                     /db_xref="GeneID:139842523"
                     /translation="MVLWSFMIPILLLVIYVANSIHFKGHKSKLPPGGRGWPIVGDSI
                     SWYNSVASSNPTTFVRQQVSRYGKIFSCSIFGRVAVVSADPIFNRFVMHNEGKLFKSS
                     YPKSFRDLVGANGVITAQGDQHRKLHTIASSMMRLDSLKSRFLIDIQLVLNQTFANLH
                     HNQTILLQDVCRKLAINLMVNQLLGVSSETEVGEIAQLFSDFVDGCLSVPISLSGFAY
                     HTAMNARTNIIKKIDKIIANTRHGDSHSDGGLVGRLVREGSLPDDAIADFIINLLFAG
                     NETTAKTMLFAIYFLTSSPEATSIILEEHQSIRNKSLQLGGEIDMLTWEDYKSMSFTQ
                     HVIDETLRLGGIAIWLMREATEDVEYQGYVIRKGSFVVPFLSVIHQDENFHKEATTFN
                     PCRWMDPENQDKKNWRNSPFYTPFGGGARLCPGAELARLQITLFLHYFLTSYRWTQVK
                     VDRMSFFPSARLVNGFPIRLTKITAAKVHSSGEELVEIVFLHIACSRDSGKGFADAPA
                     RAGPSLDQQARNLLEVHPVQQGSAAHTRLCFKTSAHSVPTS"
     misc_feature    184..1416
                     /gene="LOC139842523"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; Region: CYP90-like;
                     cd11043"
                     /db_xref="CDD:410669"
     misc_feature    order(370..372,382..384,403..405,535..537,811..816,
                     823..828,835..840,847..849,1021..1023,1048..1050,
                     1054..1056,1123..1125,1243..1251,1261..1275,1282..1287)
                     /gene="LOC139842523"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410669"
     misc_feature    order(604..609,811..813,820..825,835..837,1042..1053)
                     /gene="LOC139842523"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410669"
ORIGIN      
        1 atggtcttgt ggagctttat gattcctatc ttgttgcttg tgatttatgt agcaaattct
       61 atacatttca aaggacataa gagtaaatta cctccgggag gaagagggtg gcctatagtt
      121 ggtgatagca tcagttggta taattctgtt gcaagctcta atcctactac ttttgttcga
      181 caacaagttt caaggtatgg aaagatcttc tcttgcagca ttttcgggag agtagcagtg
      241 gtatccgcgg atcccatatt taacagattt gtgatgcaca atgaaggaaa acttttcaaa
      301 tcaagttatc caaagtcatt tcgagatttg gttggggcga acggtgtgat cacagcccaa
      361 ggagatcaac accgaaagct tcatacaatt gcttcaagca tgatgcgtct tgactctctc
      421 aagtctcgct tcttgataga tatccaactt gttttgaacc aaacatttgc caatctacat
      481 cataatcaga ccattttact tcaagatgta tgtagaaagt tggcgattaa cctaatggtg
      541 aatcaactgc ttggggtatc aagtgagaca gaagtgggtg aaatagcgca attgttctct
      601 gatttcgtgg atggttgtct ctctgttcct atcagtttat ctggatttgc ttatcacact
      661 gctatgaacg caagaacaaa tataattaaa aagattgata aaataatagc aaatacgaga
      721 catggtgata gtcatagtga cggtgggttg gtcggaagat tagtgaggga agggagtctc
      781 cctgacgatg caattgccga ctttattata aacctcttgt ttgccggaaa tgaaacaacc
      841 gctaagacta tgcttttcgc gatatatttt ttgactagtt ctccagaagc cacaagtata
      901 atattggagg agcaccaaag cataaggaat aaaagtcttc aattgggtgg tgaaattgac
      961 atgttaacgt gggaagacta caaatcgatg tcatttactc aacatgtgat agatgaaact
     1021 cttcgtttag gtgggattgc gatttggtta atgagagaag caacagaaga tgttgaatat
     1081 caaggttacg ttatccgtaa aggaagcttt gtggttccat ttctttcggt aattcatcag
     1141 gacgaaaact ttcataaaga agcaacgact tttaatcctt gtagatggat ggatcctgaa
     1201 aatcaagaca agaaaaattg gagaaacagt ccgttttata caccatttgg aggaggagct
     1261 cgcttgtgtc cgggtgcaga gttggcccgc cttcagatca cgttattttt gcattacttt
     1321 ctaacttctt acaggtggac tcaagttaaa gtggatagaa tgtctttctt tccgtcagct
     1381 agactggtta atggatttcc aatccgatta actaaaataa ctgcggcaaa agtgcattct
     1441 agcggcgaag aactcgtaga gattgttttt ctacatattg cttgtagtcg tgattctggg
     1501 aagggattcg ctgatgcacc tgctcgtgca gggccttcat tggatcaaca agctcgcaac
     1561 ctacttgagg tgcatcctgt acagcagggt tcggcagcgc acactcggct ttgttttaaa
     1621 acgagtgctc attctgtacc tacctcatga
//
LOCUS       XM_071832656             735 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842525), mRNA.
ACCESSION   XM_071832656
VERSION     XM_071832656.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..735
                     /gene="LOC139842525"
                     /note="uncharacterized LOC139842525; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842525"
     CDS             1..735
                     /gene="LOC139842525"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688757.1"
                     /db_xref="GeneID:139842525"
                     /translation="MRVVIDVMRYDKAMWVLLGDFNEVRSKSERKNTNFLEHRAKRFS
                     NFIKDNNLIDIPLRGRIYMRISTNGVEFSKLDRFLVSKNFLQQWPNTHALVLNKKHTD
                     HCPIILKEGNVDFGPKPTKVFDEWLHHKEAPEVIKVAWLMEVKSSNLDCIFRDKLKNV
                     KAELRKWYSTSPGKLKAEIDELTELVNNWEIRAETDVLNETQLKDWMDSRDNLFKREK
                     VELEMLKQKSRFKWALEGDENTKFFS"
     misc_feature    <46..327
                     /gene="LOC139842525"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgagggtcg ttatagatgt aatgagatat gataaggcaa tgtgggtctt gctaggtgat
       61 tttaatgagg ttcggtccaa gtctgaaaga aagaacacaa atttccttga acaccgcgcc
      121 aaacgcttta gcaacttcat caaagacaac aatttaattg acatcccact ccgaggaagg
      181 atttacatga gaatcagtac gaatggggtg gaattcagta aacttgacag attcttggtc
      241 tctaaaaatt ttctccagca gtggccaaat actcacgctt tggtgcttaa caagaaacat
      301 acggaccact gcccgataat acttaaagaa ggaaatgtgg actttggccc taagcccaca
      361 aaagttttcg atgaatggct acatcataag gaagcacctg aagtaatcaa agtagcatgg
      421 ttgatggagg ttaaatcctc aaatctcgat tgcatttttc gcgacaaatt gaaaaatgtc
      481 aaagccgaac ttcgtaaatg gtactctacc tctcctggga agctaaaagc agagattgac
      541 gagttaactg agttggttaa taactgggaa atcagagcag aaaccgatgt gctaaatgaa
      601 acacaattga aagattggat ggattcccgg gataatttgt tcaaaagaga aaaggttgag
      661 ctagaaatgt taaagcaaaa atcccggttc aaatgggcct tggaaggaga cgagaatacc
      721 aaattttttt cataa
//
LOCUS       XR_011757437            1747 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842526), transcript variant X1, ncRNA.
ACCESSION   XR_011757437
VERSION     XR_011757437.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1747
                     /gene="LOC139842526"
                     /note="uncharacterized LOC139842526; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842526"
     ncRNA           1..1747
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842526"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139842526"
ORIGIN      
        1 tctaaatttc aagtacccgg cttttctccc caaaaatttc atccctaaaa ttagcaaccg
       61 cactacaaat tcaattttca agttgtatag aatttacgat tacgattaga gcgttccttc
      121 cacttctacg cgaccttctt caaccctaaa acattcgttc atgcctcttc gcagatggaa
      181 aacgagacca gtgactggaa agattattat aatctgtgtt gcgtgtgctt tacgagagct
      241 ggagatgttg ctgactacat cagaattgat agccctacac atggttttag gcatcatgtg
      301 cctttcaagg ggttatatgg tcattctctt cgtattccac ctcctactct tcctcatgct
      361 ttgagagctt ctaggtcaaa gtaagtttat ctagtacaat tcagcttgga tatcatcatt
      421 ttaaaaaaaa aaatatttgc tttattttcc tttcttaaca tattgtatat gaagagtaat
      481 gatagatatg cctacttact ttagcatctg ctatgatttg agatactttt tgaccgaata
      541 agagatacat taaatgtaaa tgcatattta aaataagata cacatgaggt acttttaaaa
      601 gcatacattc ggtttggcgc ttggctaagt tagtgtttga tcagaaccaa atgacctgca
      661 atagttaacc caataaccta cttgttttgt tagaacatgt ctaactatca gtttgctata
      721 aaggacctag atttgcagtt cgtgatctaa ggttgttgat agattctttc actagaaaca
      781 tcaactattg ctggtaatac tgtataactt acacatttga ataaaaggac cctacttcta
      841 aaagctgata tcaaaacaaa acttctcgaa attggtggtt gtaacagaac atactaagac
      901 taatgctgag tttttcacta cacatttcaa tacagagaat gaagtgagaa ttagtagtaa
      961 ccaaacatat ctcttaagga ttgcttatga gccagtatac gtatgctcat atggttagtt
     1021 tgcttttcat tgatttattt ttgcttttta aaagctgtgc ggtaaaggtt tagacctgat
     1081 tgcaggttac gtgggttggg taacctacca aaatgggctt gagtattcgt gagctattat
     1141 ttgacgatta acactactat atagtaaaat gaaataactt taattatttg tagtatccga
     1201 tccacatgtg gtcatagact tggttgactc acatgaacta agtttttgtc tgtttaatca
     1261 ggtttgctag tgtgttttgt ttttgctact ttgatggatg tatcattttc ttatcttctt
     1321 tgtttttcat tcaccttttc actctatgat gaagaacata caacccatta acatcatctt
     1381 tatatttatg atagtaaagt atggtcacat tatgccttgt tatacattta gactgaaaga
     1441 tatggtatcc agatttgaag gttttgatag tgtcagtttc tagtaatgaa gtaggttttc
     1501 gagttgaatt acagaattag gatatcaaac cggtttagtg catttataat taattttcat
     1561 acacttctca catacttgaa ctgatatagg ttctgattga attttcgttg gagagccttc
     1621 cttctatggt tgcgggagta tactcaaatg acaactactc aatttcataa attgctttct
     1681 ataggtattt ataattctca tgtaacttac tatttaaaag cctgtagtaa gtaatattat
     1741 ttatcag
//
LOCUS       XR_011757438             538 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842526), transcript variant X2, ncRNA.
ACCESSION   XR_011757438
VERSION     XR_011757438.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..538
                     /gene="LOC139842526"
                     /note="uncharacterized LOC139842526; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842526"
     ncRNA           1..538
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842526"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139842526"
ORIGIN      
        1 tctaaatttc aagtacccgg cttttctccc caaaaatttc atccctaaaa ttagcaaccg
       61 cactacaaat tcaattttca agttgtatag aatttacgat tacgattaga gcgttccttc
      121 cacttctacg cgaccttctt caaccctaaa acattcgttc atgcctcttc gcagatggaa
      181 aacgagacca gtgactggaa agattattat aatctgtgtt gcgtgtgctt tacgagagct
      241 ggagatgttg ctgactacat cagaattgat agccctacac atggttttag gcatcatgtg
      301 cctttcaagg ggttatatgg tcattctctt cgtattccac ctcctactct tcctcatgct
      361 ttgagagctt ctaggtcaaa gttctgattg aattttcgtt ggagagcctt ccttctatgg
      421 ttgcgggagt atactcaaat gacaactact caatttcata aattgctttc tataggtatt
      481 tataattctc atgtaactta ctatttaaaa gcctgtagta agtaatatta tttatcag
//
LOCUS       XR_011757439            1171 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842526), transcript variant X3, ncRNA.
ACCESSION   XR_011757439
VERSION     XR_011757439.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1171
                     /gene="LOC139842526"
                     /note="uncharacterized LOC139842526; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842526"
     ncRNA           1..1171
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842526"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139842526"
ORIGIN      
        1 tctaaatttc aagtacccgg cttttctccc caaaaatttc atccctaaaa ttagcaaccg
       61 cactacaaat tcaattttca agttgtatag aatttacgat tacgattaga gcgttccttc
      121 cacttctacg cgaccttctt caaccctaaa acattcgttc atgcctcttc gcagatggaa
      181 aacgagacca gtgactggaa agattattat aatctgtgtt gcgtgtgctt tacgagagct
      241 ggagatgttg ctgactacat cagaattgat agccctacac atggttttag gcatcatgtg
      301 cctttcaagg ggttatatgg tcattctctt cgtattccac ctcctactct tcctcatgct
      361 ttgagagctt ctaggtcaaa gtaagtttat ctagtacaat tcagcttgga tatcatcatt
      421 ttaaaaaaaa aaatatttgc tttattttcc tttcttaaca tattgtatat gaagagtaat
      481 gatagatatg cctacttact ttagcatctg ctatgatttg agatactttt tgaccgaata
      541 agagatacat taaatgtaaa tgcatattta aaataagata cacatgaggt acttttaaaa
      601 gcatacattc ggtttggcgc ttggctaagt tagtgtttga tcagaaccaa atgacctgca
      661 atagttaacc caataaccta cttgttttgt tagaacatgt ctaactatca gtttgctata
      721 aaggacctag atttgcagtt cgtgatctaa ggttgttgat agattctttc actagaaaca
      781 tcaactattg ctggtaatac tgtataactt acacatttga ataaaaggac cctacttcta
      841 aaagctgata tcaaaacaaa acttctcgaa attggtggtt gtaacagaac atactaagac
      901 taatgctgag tttttcacta cacatttcaa tacagagaat gaagtgagaa ttagtagtaa
      961 ccaaacatat ctcttaagga ttgcttatga gccagtatac gtatgctcat atggttctga
     1021 ttgaattttc gttggagagc cttccttcta tggttgcggg agtatactca aatgacaact
     1081 actcaatttc ataaattgct ttctataggt atttataatt ctcatgtaac ttactattta
     1141 aaagcctgta gtaagtaata ttatttatca g
//
LOCUS       XR_011757440            1192 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842526), transcript variant X4, ncRNA.
ACCESSION   XR_011757440
VERSION     XR_011757440.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1192
                     /gene="LOC139842526"
                     /note="uncharacterized LOC139842526; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842526"
     ncRNA           1..1192
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842526"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139842526"
ORIGIN      
        1 tctaaatttc aagtacccgg cttttctccc caaaaatttc atccctaaaa ttagcaaccg
       61 cactacaaat tcaattttca agttgtatag aatttacgat tacgattaga gcgttccttc
      121 cacttctacg cgaccttctt caaccctaaa acattcgttc atgcctcttc gcagatggaa
      181 aacgagacca gtgactggaa agattattat aatctgtgtt gcgtgtgctt tacgagagct
      241 ggagatgttg ctgactacat cagaattgat agccctacac atggttttag gcatcatgtg
      301 cctttcaagg ggttatatgg tcattctctt cgtattccac ctcctactct tcctcatgct
      361 ttgagagctt ctaggtcaaa agaatgaagt gagaattagt agtaaccaaa catatctctt
      421 aaggattgct tatgagccag tatacgtatg ctcatatggt tagtttgctt ttcattgatt
      481 tatttttgct ttttaaaagc tgtgcggtaa aggtttagac ctgattgcag gttacgtggg
      541 ttgggtaacc taccaaaatg ggcttgagta ttcgtgagct attatttgac gattaacact
      601 actatatagt aaaatgaaat aactttaatt atttgtagta tccgatccac atgtggtcat
      661 agacttggtt gactcacatg aactaagttt ttgtctgttt aatcaggttt gctagtgtgt
      721 tttgtttttg ctactttgat ggatgtatca ttttcttatc ttctttgttt ttcattcacc
      781 ttttcactct atgatgaaga acatacaacc cattaacatc atctttatat ttatgatagt
      841 aaagtatggt cacattatgc cttgttatac atttagactg aaagatatgg tatccagatt
      901 tgaaggtttt gatagtgtca gtttctagta atgaagtagg ttttcgagtt gaattacaga
      961 attaggatat caaaccggtt tagtgcattt ataattaatt ttcatacact tctcacatac
     1021 ttgaactgat ataggttctg attgaatttt cgttggagag ccttccttct atggttgcgg
     1081 gagtatactc aaatgacaac tactcaattt cataaattgc tttctatagg tatttataat
     1141 tctcatgtaa cttactattt aaaagcctgt agtaagtaat attatttatc ag
//
LOCUS       XM_071832658            2235 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides homeobox-leucine zipper
            protein HDG11 (LOC139842527), mRNA.
ACCESSION   XM_071832658
VERSION     XM_071832658.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2235
                     /gene="LOC139842527"
                     /note="homeobox-leucine zipper protein HDG11; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139842527"
     CDS             1..2235
                     /gene="LOC139842527"
                     /codon_start=1
                     /product="homeobox-leucine zipper protein HDG11"
                     /protein_id="XP_071688759.1"
                     /db_xref="GeneID:139842527"
                     /translation="MDYGGGSGGGSGGDSSDKKKRYHRHTSLQIQILESTFKECPHPD
                     EKTRMQLSRELGLSPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIVIREA
                     LKNLVCPTCGGPPVGEECYFDEQKLRFENTQLKEELDRVSSIAAKYIGRPMLQLPPVQ
                     PIHMSSLDLSMASYGGGGSGTSNNQRMMMMMNSSGPSLDLDLLTGSAIGASSSTINPD
                     PPFQNPVHHSDIDKSLMAEIATNAMDEFIRLVQTNEPLWIKGRKEGMEILNLDNYSRV
                     FPRPNDTLKNANVRIEASRASGVVMVNSLQLVDMFVDSIRFIELFPSIVSRSRTIEVI
                     SSGLLGSQSGTLQLMYEELQVLSSLVPTRQMYVLRFVQQIEQGSWAVVNVSYDLPQYD
                     LYAQSRYKARRLPSGCLIQDMPNGCSKVTWVEHMEVEEMGPIDRLYRDFIHSGFAFGA
                     KRWIASLQRACERSALMMSTSSSHDLGGVVPSAEGKRSMMKLAQRMVINFCSSINPSN
                     GHQWTSLAGMNEFEVRATLHKSTDPAQPNGMVLSASTTIWLPTPPPNVFDFFRDGRTR
                     PQWDVLSNQNPVQEVAHISNGAHPGNCISVLRAYTPSQDMLILQESCTDASGSLVVYC
                     PVDLPAINIAMNGEDPSYIPILPSGFIITTDGHHEITSQLTNPNPNPNDASTSNNNNN
                     DDQGPTGSLVTIVFQIQVSSLPSAKMSPESLATVNNLITNTVHQIKASFNGCSTTAAT
                     TTTT"
     misc_feature    55..222
                     /gene="LOC139842527"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     misc_feature    694..1386
                     /gene="LOC139842527"
                     /note="C-terminal lipid-binding START domain of the
                     Arabidopsis homeobox protein GLABRA 2 and related
                     proteins; Region: START_ArGLABRA2_like; cd08875"
                     /db_xref="CDD:176884"
     misc_feature    order(778..783,814..816,880..882,886..888,919..921,
                     931..933,943..945,952..957,970..975,1054..1056,1060..1071,
                     1078..1080,1087..1089,1093..1095,1099..1101,1147..1149,
                     1201..1203,1207..1218,1222..1224,1258..1260,1264..1266,
                     1270..1272,1276..1278,1282..1284,1288..1290,1309..1311,
                     1315..1323,1327..1335,1342..1347,1354..1356)
                     /gene="LOC139842527"
                     /note="putative lipid binding site [chemical binding];
                     other site"
                     /db_xref="CDD:176884"
ORIGIN      
        1 atggattacg gcggtggctc tggtggtggc tccggtggtg attcttctga taaaaagaaa
       61 cgttaccacc gtcacacttc tctccagatt cagattcttg aatctacttt taaagaatgt
      121 ccacatccag atgagaaaac aagaatgcaa ttaagtagag agttgggttt atctccaaga
      181 cagattaagt tctggtttca aaatcgaaga acccaaatga aggcacaaca cgaacgcgcg
      241 gacaattgcg cgttgagagc agaaaacgat aagatacggt gcgaaaacat tgttatacga
      301 gaggcgttga agaatttggt gtgtccaaca tgtggcggtc ctccagtcgg agaagaatgt
      361 tactttgatg agcaaaaact tcgattcgaa aacacccagt tgaaggaaga gttggataga
      421 gtatcaagta ttgcagccaa gtacataggt agaccaatgt tacagcttcc accagtacag
      481 ccaattcaca tgtcatcact tgatctatca atggctagtt atggtggtgg tggtagtggt
      541 acatcgaaca accaacgaat gatgatgatg atgaactcta gtggtccttc tttggatctt
      601 gatctattaa ctggttcagc cattggtgca tcatctagca caatcaatcc tgaccctccg
      661 tttcaaaacc ccgtgcatca ttctgatatc gacaagtcat taatggcgga aatcgctact
      721 aatgccatgg atgagttcat taggcttgtg caaacaaacg agccgttgtg gattaaaggt
      781 cgtaaagaag ggatggaaat acttaatctt gataactaca gtcgtgtctt tcctcggcct
      841 aatgatactt tgaagaacgc gaatgttaga atcgaagcgt cgagggcttc tggtgttgtt
      901 atggtgaata gtttgcagtt ggttgatatg tttgtagact cgatcagatt tatcgaactg
      961 tttccatcaa tcgtgtcacg atcaagaacg atagaagtga tctcatctgg attgttaggt
     1021 tcacaaagtg gcactttgca gctgatgtat gaagaattac aagtattatc gtcgttagtt
     1081 ccaactagac agatgtacgt gcttagattc gttcagcaaa ttgagcaagg ctcgtgggcc
     1141 gttgtgaatg tatcgtatga tcttcctcag tatgatctat acgctcagtc acgatataaa
     1201 gcacgacgtc taccttctgg atgtttgatt caggatatgc ctaatggctg ctcaaaggta
     1261 acatgggtcg agcatatgga ggtagaagaa atgggcccga ttgataggct ttatagagat
     1321 tttatccata gtggtttcgc atttggggcc aaacgatgga tcgcttctct tcaaagggct
     1381 tgcgaaagaa gtgctttaat gatgtccact tcttcatctc atgatctagg aggagtagtt
     1441 ccttctgctg aaggcaagag gagcatgatg aagttagcac aaagaatggt gattaacttc
     1501 tgttcgagca taaatccgag taatggtcat caatggacat ctcttgctgg tatgaatgag
     1561 tttgaggttc gagccacatt acacaagagc actgacccag cccaacccaa tggcatggtt
     1621 cttagtgcat ccaccactat ttggcttccg actcctccac caaatgtctt cgatttcttc
     1681 agggatggaa gaactagacc tcagtgggac gttttatcaa accaaaatcc agtacaggaa
     1741 gttgcacata tctcaaatgg tgctcatcca ggaaactgta tatccgtcct tcgggcatac
     1801 actccgagcc aggacatgtt aatactacaa gagagttgta cagacgcatc aggttcacta
     1861 gtcgtatact gtccagtcga cttgccagcc ataaacatag caatgaacgg tgaagatccg
     1921 tcctacattc cgatacttcc atctggtttc atcatcacaa ccgacggcca ccatgagatc
     1981 acatcacaat taaccaatcc taatcctaat cctaatgatg cttcgactag taacaacaac
     2041 aacaatgacg atcaaggtcc cacagggtca ctcgttacaa tcgtgtttca gatacaagtt
     2101 agcagtttac catcagctaa aatgagccca gagtcattag caacagtgaa taacttaatc
     2161 acaaacacag tgcatcaaat taaagcttca ttcaatggat gttctactac tgctgctact
     2221 actactacca cttaa
//
LOCUS       XM_071832659             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842528), mRNA.
ACCESSION   XM_071832659
VERSION     XM_071832659.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139842528"
                     /note="uncharacterized LOC139842528; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842528"
     CDS             1..636
                     /gene="LOC139842528"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688760.1"
                     /db_xref="GeneID:139842528"
                     /translation="MFIFTVYRIETCKTSIVADRIKWADSNICFSWAWAAEPKWRTAS
                     DLSKLIEKLTVYTPSSKNRDSWVWKFKSTNHYSSNSLANLLFELDTVNAPALEPTVLN
                     TMNPQKIGIYMWRVKKYKVSVRSELDACGIDIHSTRCPVCNEDIETLQHILLTCTTAK
                     DIWSRICKWWNLDVLNISNLTYLAKPHHPWFTTASRSSLWQAIVWASSYFI"
     misc_feature    226..486
                     /gene="LOC139842528"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgttcatat ttactgttta tcgaatagag acatgcaaaa catctattgt ggcagaccga
       61 attaaatggg ccgactccaa tatttgcttc agttgggctt gggccgcaga gcccaaatgg
      121 cgtacagctt cggacttatc taaactcatc gagaagctta ctgtttatac accttcgtct
      181 aaaaacaggg atagctgggt ttggaagttt aagagtacca atcattactc ctccaactcc
      241 ttagcaaatc tcttatttga acttgacact gtcaacgctc ctgcacttga accaactgta
      301 cttaacacca tgaacccaca aaagattgga atctacatgt ggcgggtcaa gaaatataaa
      361 gtgtcggtac gatcagaact ggatgcctgt ggaatagaca tacactcaac tagatgtcca
      421 gtatgcaacg aggatatcga aacccttcaa catatacttt taacctgcac aacagctaaa
      481 gatatttggt ctagaatctg caaatggtgg aatttagatg tactaaacat ctcaaatctc
      541 acttatttgg ctaaaccaca tcacccttgg ttcaccacag catcaagatc ttccttatgg
      601 caagcaatag tttgggcctc gagctacttc atatga
//
LOCUS       XM_071832660             510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842529), mRNA.
ACCESSION   XM_071832660
VERSION     XM_071832660.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..510
                     /gene="LOC139842529"
                     /note="uncharacterized LOC139842529; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842529"
     CDS             1..510
                     /gene="LOC139842529"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688761.1"
                     /db_xref="GeneID:139842529"
                     /translation="MENVGDVRVSDTEDSWSWNIDHSGIFVVNSTRRHIDKSILPSSN
                     RCTTWMKYVPSKINILLWRLNLAVKGLEVPSLSCPVCNSKVENRDHLFFKCNTAASIW
                     LLIRVWVNNGMVHFNSLSDWQVWFNNWKAPNHNKDKLYAIFAATIWLLWRYRNNVLFN
                     DPIKIMFSG"
     misc_feature    76..303
                     /gene="LOC139842529"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaaaatg taggagatgt ccgtgtttcc gatacggaag actcatggtc ttggaacatt
       61 gatcattcag ggatctttgt tgttaattca acaagaagac atatcgacaa gtccatttta
      121 ccttcgtcta acaggtgcac aacttggatg aaatacgttc ctagcaagat caatattctt
      181 ttatggaggc tcaacctagc ggttaagggt cttgaagttc cttctttatc ttgcccggtt
      241 tgtaactcga aagttgaaaa tagagaccat ctatttttca aatgcaacac cgctgcatct
      301 atttggcttc ttatacgcgt ttgggtcaac aatggaatgg tgcactttaa ctcgctttct
      361 gattggcagg tttggttcaa taactggaaa gctcctaatc acaataaaga caagttgtat
      421 gctattttcg cagctacaat ctggctctta tggagatata gaaacaatgt tctttttaat
      481 gatccaataa agattatgtt ttcaggttaa
//
LOCUS       XM_071832661             975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842530), mRNA.
ACCESSION   XM_071832661
VERSION     XM_071832661.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..975
                     /gene="LOC139842530"
                     /note="uncharacterized LOC139842530; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842530"
     CDS             1..975
                     /gene="LOC139842530"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688762.1"
                     /db_xref="GeneID:139842530"
                     /translation="MESKLLCIGAITARSPSVSTRLKILSIETLSRQNLDKGLPFLDV
                     IASDEQGDRISLILKNAHKKKYEELLHEQNIYVVQNVGTLKLNSQMSKLNHWTHDCKL
                     IFINKTTIVPVPSTQWTGSNGFKFIPFLELINCQLPEKHTADVIGRVNFYDREPKSYG
                     SGSEDKSKYINLELKDLDGSIVSCTLFAKYMVDFLAYMKTVADTQCVILVIQFGRTQK
                     YQRQLTVGTDWTHTRVFIDSDIPVMNEFRKRYMELHKDNDSESSLAPSFTPSLTPKGK
                     TLEEFFEHVICVGCGDLSINIAGIFVVEAEIIAIEPDESWSYIADDVA"
     misc_feature    <124..330
                     /gene="LOC139842530"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(127..138,142..144,163..171,175..177,220..222,
                     244..252,301..309)
                     /gene="LOC139842530"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(223..225,229..231,235..237,325..327)
                     /gene="LOC139842530"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    430..753
                     /gene="LOC139842530"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(430..432,619..621,625..627,631..633,694..696)
                     /gene="LOC139842530"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(445..447,454..459,511..522,526..528,547..555,
                     559..561,616..618,643..651,670..678)
                     /gene="LOC139842530"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
ORIGIN      
        1 atggaatcga aattgctgtg cataggtgca atcactgcta ggagtccatc tgtttccacg
       61 cgtttgaaga tactcagtat tgaaacattg tcaagacaaa atcttgacaa gggcttgcct
      121 tttcttgatg ttatagcatc tgatgagcag ggtgatcgca ttagtcttat tctgaaaaat
      181 gctcataaga aaaaatatga ggaactattg cacgagcaaa atatatatgt ggttcaaaat
      241 gttggaacat taaagctaaa cagccagatg tccaaactta atcactggac acacgattgc
      301 aaactcattt ttataaacaa aaccacaatt gtgccagttc cttccacgca atggactgga
      361 agtaatggtt tcaaattcat tccatttctg gaactaatca actgtcaact accagaaaaa
      421 cacactgcag atgtgatcgg tagagtgaat ttctatgacc gggaaccaaa gtcctatggt
      481 agtggcagtg aagataagtc taaatacatc aacctggagc taaaggattt agacggctca
      541 attgtctcat gcaccctatt tgccaaatat atggtagact ttttggcata catgaaaact
      601 gttgcagata ctcaatgtgt catcttggtc attcaatttg gtcgcacaca gaaataccaa
      661 cgtcagctta ctgtgggtac agactggact catacgagag tatttataga tagcgacata
      721 cctgttatga atgaattcag gaaaaggtac atggagttac acaaagataa tgattctgag
      781 tcatcattgg cgccatcatt tacaccttcg ttgacaccaa aagggaaaac attggaagag
      841 ttttttgagc acgttatttg tgttggatgt ggtgatttgt caataaatat tgcgggtatt
      901 tttgttgttg aagcagagat tattgccatt gaaccggacg aatcgtggtc atacattgct
      961 gatgatgtag cgtga
//
LOCUS       XM_071832662            5538 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842531), mRNA.
ACCESSION   XM_071832662
VERSION     XM_071832662.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5538
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5538
                     /gene="LOC139842531"
                     /note="uncharacterized LOC139842531; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139842531"
     CDS             1..5538
                     /gene="LOC139842531"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688763.1"
                     /db_xref="GeneID:139842531"
                     /translation="MEKDVSSFISSNTKPASKTNKKLADTGGQSVERTPLRDLNRNES
                     VLSIKEPVQGTIQTKRKKHLIDSRSVSYGYQIHSTHQSYSSNVSGGHGNLIQSKPPST
                     TNTFTQAIDGQIHEMQLIDVTNEDAVSRKRRKDIMQSNRSMLSHKATIAKTSDNSIVS
                     SLQTNLKETTQASSTRRSQDKQKGKENADPYQHTKHYPTIDTSLNYQQSGNSVAIPVT
                     SNKCTSIKYIVPKPTTPAISKNHTLLVEDNFILTPTPQKSPVDHSRTRTTKAANPSSF
                     ATPLTIKMRNNIIPNASTFSHSTSSGYIFKSNHRASTNAGTQNKTRTNKSAKVSLFNT
                     PLTINKLCGNSEYTSAVSHGSASGITFTSTPTSTENAGTPLPQQISRQVHSTNLQYKT
                     ARKERIEKMRQKKFNTLNRKRNTTPVPFDISGEGTSGVNQQRISGISKAYCDEGDLSF
                     TCSACGAKLWKKETKRGLRTKGLRGAFSLCCLKGRIKLPEFTTTPPKLLMDLYTNKHP
                     KSKHFIENVRQYNMVFAFTSMGGKVDKSANRWKGPYTFRIKGQNCHRMGGLVPSSGSI
                     PKFSQLYIYDTSNEARNRTKAIGGINGNEPLGSKNQLDESIIQELMELLDDCNPLVKM
                     YRMARDRYEETKIANFKIKLIARRSTDGRNYNLPTVDEVAALIVGDIDLQFDKRDIVV
                     DSQTEGLKRISELHPHYLALQYPLLFAYAEDGYRPDIDHAEIEGIKTKKRKRVTMREF
                     FAYKIQERAIPTLVHLARKLQQQLLVDAYTMVESERIYYIRKNKKIQRADTFSNLTTA
                     HISGPVDNSMLGNRIRLPSSFTGCARYMLENYRDAMALCRVYGYPDLFITFTCNSKWP
                     EISRALEGTGFNPEDKPAYQSRMFKIKLDRLMDDIKQNKIFGRVKADLYTVEFQKRGL
                     PHAHICIFLDERDKLPEPEDIDEYICAEIPDKDEDPELFQLVSDLMIHGPCGEKNPNC
                     VCTDINKKCTKNFPKPFSDVTSLDTNGYPIYKRRDNGRKIMKQGQELDNGNVVPYNPL
                     LLKKYQAHINVEWCNQVGAIRYLFKYIHKGNDRVTAGVCDEDTDEIKQYYDCRYISSC
                     EAVWRMLAFDINHRNPTVIRLAFHLEDQHSVIFDETQLLEDVLEDPSVNVSQFLEWMK
                     CNETNDDAKLLTYVEFPTKFVWNKDTRLWTPRKKLTGSIGRIHHVSPQTGELFFLRIL
                     LNKVRGPTCYQDIRTVNGIVCPTFKAGCYEMGLLDDDQEYIESIKSASVWGSGSWLRN
                     FFAQLLLSESLSRPEDVFEKTFDYLAADIIHQSISGIQPTREMIQNLILNDIEKTLQS
                     NGKSLRSFSSMPVPTSTNLNLSENPLIIDELSYDMSALESEHLELIAKLNSDQKKAYD
                     TIINAVEADNGGVFFLYGYGGTGKTFLWTTLSAAFRSKGEIVLNVASSGIAALLLPGG
                     RTAHSRFAIPIDPTDESFCRILPNSHLAGLIRRAKLIIWDEAPMVKRICVETLDRSFR
                     DICRSINPNSMDTPFGGKIVVFGGDFRQVLPVLLSILQMLNLIKKLEDIRKFADWLLD
                     IGDGNINPTDDGISDIQMPEDVLINDVEDPIGSIIKCIYPNYLQNLGNPTYYQQRAIL
                     APTHEVVNIINDRMMESLEGEARSYLSSDSICQFDRDSDFNSELYTTDYLNSINIGGL
                     PKHNLTLKVGVPVMLLRNIDQSGGLCNGTRLQIIELCEKVIKAKVLTGTHVGKITAIS
                     RMLIVPSDKRIPFRFQRRQFPIAVCFAMTINKSQGQSLANVGLFLPKPVFSHGQLYVA
                     LSRVTSKNGLKVLILNKDNELSDTTKNVLNLSAKTFAGKNKVVTDVMWKTQTFMRSVI
                     VLQ"
     misc_feature    2251..2757
                     /gene="LOC139842531"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
     misc_feature    4105..5112
                     /gene="LOC139842531"
                     /note="PIF1-like helicase; Region: PIF1; pfam05970"
                     /db_xref="CDD:428699"
     misc_feature    order(4192..4212,4426..4428)
                     /gene="LOC139842531"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
     misc_feature    5098..5382
                     /gene="LOC139842531"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    order(5146..5157,5263..5265,5269..5274)
                     /gene="LOC139842531"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350196"
     misc_feature    5281..5283
                     /gene="LOC139842531"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggagaaag atgtgtcatc tttcatatca agcaatacaa aacctgcttc aaaaactaac
       61 aagaaattag cggataccgg tggtcaatca gttgaaagaa ctccacttag agatctaaac
      121 agaaatgaat cggtgttatc aataaaagaa cctgtacaag gtacgattca aactaaaaga
      181 aaaaaacatc tcattgacag ccgaagtgtt tcttatggat accaaattca ttccactcat
      241 caatcatatt cttctaatgt ttcaggtgga catggcaact tgattcaatc aaaaccgccg
      301 tcaactacca atacatttac ccaggcaata gatggtcaga ttcatgaaat gcaattaatt
      361 gatgtcacaa acgaagatgc tgtttcaaga aaacgacgaa aggatattat gcagagtaac
      421 agaagcatgt tgtcacataa agctacaatt gccaaaacat ctgataattc tattgtctca
      481 agtttacaaa ccaatctcaa ggaaaccaca caagcgtcaa gtacgcgtcg ttcacaagac
      541 aaacaaaaag gaaaagaaaa tgctgaccca taccagcata ccaaacatta tcctacaatt
      601 gacacatctt taaattacca gcaatcaggc aattcagtag ccattccagt aacttcaaac
      661 aaatgtactt ctatcaaata cattgtaccc aaacctacga caccagctat ttcgaaaaac
      721 catacactct tagttgaaga caattttata ctcacaccga caccacaaaa gtcaccagtt
      781 gatcattcgc gaacacgaac aaccaaggca gctaacccat catcatttgc cacaccgtta
      841 acaataaaaa tgcgcaacaa tattattccc aatgcatcaa cattctcaca cagtacatca
      901 agtggttaca tatttaagtc aaaccataga gcatctacaa atgcaggaac ccaaaataaa
      961 actcggacaa acaagtcagc gaaagtatca ctattcaaca cacctttgac aatcaataaa
     1021 ctgtgcggta atagtgaata tacgtcagca gtctctcacg gttcagcaag tggtatcaca
     1081 tttacatcaa cacctacatc aactgagaat gcaggaactc cattacctca acagattagc
     1141 agacaagtac actcaacaaa ccttcagtat aaaaccgcaa gaaaggagcg aattgaaaaa
     1201 atgaggcaaa agaaatttaa tacgttaaac aggaaaagga atacaacacc tgtaccattt
     1261 gatattagcg gtgaaggtac ctcgggcgtt aatcaacaac gaatcagtgg aatttcaaaa
     1321 gcttactgtg atgaaggaga cttatctttt acttgctccg cttgtggagc caaactgtgg
     1381 aaaaaggaaa caaaacgtgg tttacgtaca aaagggttac gaggcgcttt ttccttatgt
     1441 tgtctcaagg gtagaatcaa actaccagaa ttcacaacta caccacctaa acttttgatg
     1501 gatttataca ccaacaaaca tcccaaaagt aaacatttca tagaaaatgt gagacaatac
     1561 aatatggtct tcgcatttac atcaatgggt ggtaaggtag acaaaagtgc aaacagatgg
     1621 aaaggtccgt acacatttcg aatcaaaggt caaaactgtc atagaatggg aggactggta
     1681 ccatcctctg gatcgattcc taaattttcc caactatata tttacgatac ttcaaatgaa
     1741 gcacgtaaca gaacaaaagc gatcggagga atcaacggaa acgagccatt gggatcaaaa
     1801 aatcagttgg atgagtcaat aatacaagaa ttgatggaac ttttagacga ttgcaacccg
     1861 ctggtgaaga tgtacagaat ggcacgcgat cgttatgaag aaaccaaaat tgcaaatttt
     1921 aaaatcaaac taattgctag gagaagcact gatggtcgta actataacct accaaccgta
     1981 gatgaagtcg ctgcattaat tgttggtgac atagacttac aatttgataa gagggatata
     2041 gttgtcgaca gtcaaactga aggtttaaaa cgaataagtg agctacaccc gcattatttg
     2101 gcgctgcaat atcctctgtt gtttgcttat gcagaggacg gttaccggcc tgatattgat
     2161 cacgcagaaa ttgaagggat aaaaacaaag aagcgaaaac gagttactat gagagagttc
     2221 tttgcttaca aaatacaaga aagagcaatt ccaactttag tacacttagc aaggaaactt
     2281 caacagcagt tattggttga tgcgtacaca atggttgagt ctgaaagaat atattacatc
     2341 cggaagaata aaaaaattca aagagctgat acattctcaa acttaacaac cgcgcatatc
     2401 tcgggtcctg ttgacaatag tatgttgggt aaccgaatta ggcttccatc atcatttacg
     2461 ggctgtgcta gatatatgct tgaaaactat cgagatgcaa tggctttgtg tcgagtatat
     2521 ggttaccctg acttattcat aactttcact tgcaactcga aatggccaga aattagtaga
     2581 gctttggaag ggacaggttt caacccggag gataaaccgg cgtaccaatc aagaatgttt
     2641 aaaattaaac ttgataggct catggatgat ataaagcaaa ataaaatttt tggcagagtc
     2701 aaggcggatc tctatacggt cgagtttcaa aagcgcggac taccacacgc acatatatgt
     2761 atcttcctgg atgagcgtga caaactaccc gaaccagaag atatcgacga gtatatttgt
     2821 gcagaaattc cagataaaga tgaagatcca gaactatttc aacttgtgtc tgacctaatg
     2881 atacacggac catgcggtga gaaaaatcca aattgtgtct gcactgacat taacaaaaag
     2941 tgcaccaaaa actttccaaa gccattttca gatgtcacaa gtttagatac caatggatac
     3001 ccgatctaca agagacgaga taatggaagg aagatcatga aacaaggcca agagcttgat
     3061 aacggaaacg ttgttcctta taatcctctt ttacttaaaa agtatcaagc acacatcaat
     3121 gtggaatggt gtaaccaagt cggagctatt aggtatcttt ttaaatacat ccacaaggga
     3181 aacgatcgag ttactgcagg tgtctgcgac gaagacacgg acgaaatcaa acaatactat
     3241 gactgtcgat acatatcgtc atgtgaggca gtttggcgaa tgttggcttt tgatataaac
     3301 catagaaatc cgactgttat tcgtttagca tttcacttgg aagaccaaca ttccgtcatt
     3361 ttcgatgaaa cacaattact tgaagatgtc ctagaagatc cgtcagttaa cgtctcccag
     3421 tttctagaat ggatgaaatg taatgaaact aacgatgacg cgaaactgtt gacgtatgtt
     3481 gaatttccta caaagtttgt gtggaacaaa gatacccgac tatggacacc aaggaagaaa
     3541 ttaaccggat caataggacg tattcatcac gtctcacctc aaaccggaga attgtttttc
     3601 ctacgtattt tgttgaacaa agtacgaggt cctacatgct accaagacat caggacagtt
     3661 aatggtattg tatgcccaac attcaaagca ggttgctatg aaatggggtt gttagacgat
     3721 gatcaagaat acattgaaag tatcaagtct gcaagcgttt ggggttcagg tagttggctt
     3781 cgtaattttt ttgcccaact tcttctgtca gaaagtttaa gtagacccga agatgtcttt
     3841 gaaaaaacat tcgattactt agctgctgat ataattcatc aaagcatatc ggggattcag
     3901 cctacgagag aaatgataca gaaccttatt ctgaatgaca tcgaaaagac actccaatcg
     3961 aacggtaaat ccttacgtag cttcagttca atgccggttc ctacgtccac aaacttgaat
     4021 ttgtctgaaa atcctttaat tattgatgaa ctgtcgtacg atatgtctgc actagaatca
     4081 gagcacctag aacttatagc taaattaaat tcagatcaaa agaaggcata cgacaccatc
     4141 ataaatgcag ttgaagctga taacggtgga gttttctttt tatacggata cggtggaacc
     4201 ggaaaaactt ttctttggac aactctttct gctgctttta gaagtaaagg agaaatcgtt
     4261 ctgaacgttg cctcaagtgg catagctgca ttgctattac ctggcggtag aactgcacat
     4321 tccagattcg caatacctat tgacccaact gatgaatcat tctgcaggat tctacctaat
     4381 agtcatttag ctggattaat aagaagagcc aaattgataa tatgggatga agcaccaatg
     4441 gttaaaagga tatgtgttga aactttggat cgttctttcc gcgacatatg ccgttctatc
     4501 aatccaaata gcatggacac accgtttgga ggtaagattg ttgtttttgg cggcgatttc
     4561 agacaagttc taccagttct tctctcaata cttcaaatgc tgaatctcat aaaaaaactc
     4621 gaagacatac gcaaatttgc agactggttg ttagacatag gtgatggaaa tattaatcca
     4681 acagacgatg ggatttcaga tattcaaatg ccagaagatg tgttaatcaa tgatgtagaa
     4741 gatccaattg gttcaattat aaaatgtatt tatccaaatt atctacaaaa ccttggtaat
     4801 cccacttact accaacagcg tgcaattctc gctccaaccc atgaagtagt caacatcata
     4861 aacgatcgaa tgatggagtc actagaaggt gaagcaaggt catatctgag ttctgatagc
     4921 atatgccaat tcgatagaga ttcagacttc aatagtgaat tgtacacaac tgattactta
     4981 aatagtatca acattggtgg attaccgaaa cataatttga cgcttaaagt aggtgttccc
     5041 gtgatgctac ttaggaatat agatcaatct ggaggattgt gcaatgggac tagattgcaa
     5101 attattgaac tgtgtgaaaa ggtcatcaaa gcaaaagttt taacaggtac acatgtagga
     5161 aaaatcacag ctatttctag aatgttaatc gtaccttcag acaaaagaat tccttttagg
     5221 tttcaaagaa ggcagtttcc aatagccgta tgctttgcaa tgactatcaa caagagtcaa
     5281 ggacaatcgt tggccaacgt tggtttattc cttccgaaac ccgttttcag tcacggtcaa
     5341 ctatatgttg ctctatctag ggtaacatcg aagaatggtc tcaaagtgct cattctaaac
     5401 aaagacaacg agttgtcgga tacaacaaag aatgttctca acttatctgc aaaaacgttt
     5461 gccgggaaga ataaggttgt tactgatgta atgtggaaaa ctcagacttt tatgcgttcc
     5521 gtaattgtat tacaatga
//
LOCUS       XM_071832663            1350 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            alpha-1,3-arabinosyltransferase XAT3-like (LOC139842532), mRNA.
ACCESSION   XM_071832663
VERSION     XM_071832663.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1350
                     /gene="LOC139842532"
                     /note="alpha-1,3-arabinosyltransferase XAT3-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842532"
     CDS             1..1350
                     /gene="LOC139842532"
                     /codon_start=1
                     /product="alpha-1,3-arabinosyltransferase XAT3-like"
                     /protein_id="XP_071688764.1"
                     /db_xref="GeneID:139842532"
                     /translation="MKQSDIFARSFNQHDQKRFGYGALLACFVVTWHLCTVFKPYFGP
                     LYVLNLRLMMVDELKLAMITDMTNEPKRPYVQTMETKPICNTFRKRSDTCEMSGDVRI
                     QGNSSTIFVSTSNVTNVLWTIKPYARKGDNAAMANITTFKIIQEAAKMPECNRTHNVP
                     AIVFSVGGYSGNHFHAFSDTIIPLYETSRKFNREVRFLMANKNSFWTNKFQEVLNKLS
                     RYEIIDIDNENEVHCFPSMIVGLKKDDRKELNIDSMKDFSKFLRSSYSLERSTAINMT
                     KSINKRPRILIVSRKKTRAFTNIKYLVRVARDLGFEVIVSEMNANLTRISRLVNSCDV
                     MMGVHGAGLTNIVFLPENGVFIQVVPLGKMDWMANTFYGEPSKGMGLKYLEYEISEKE
                     SSLIDQYPRNHQVFMDPYSIQNKGWEAYRSVYMDRQNVKLDVVRLKETLSKAIELLC"
     misc_feature    478..1227
                     /gene="LOC139842532"
                     /note="Glycosyltransferase 61; Region: Glyco_transf_61;
                     cl15705"
                     /db_xref="CDD:472831"
ORIGIN      
        1 atgaaacaaa gcgatatttt tgctcgtagc tttaatcaac acgaccagaa acgatttgga
       61 tacggcgcac tgcttgcttg tttcgttgtc acatggcact tgtgtaccgt attcaagcct
      121 tactttggcc ctctatatgt tttaaatttg agattgatga tggttgatga actaaagttg
      181 gcgatgatta ctgacatgac aaacgaaccg aagcgaccat atgttcaaac aatggaaacc
      241 aagccaattt gcaacacatt cagaaaaaga tcagatactt gcgaaatgag cggagacgta
      301 aggattcaag gcaattcatc aaccatcttc gtctctacgt caaatgtcac aaacgtttta
      361 tggacgataa agccttacgc acgaaaagga gataacgccg caatggctaa tattacaact
      421 ttcaaaataa tacaagaagc tgcaaaaatg cctgaatgta acagaactca caatgtaccc
      481 gccatagttt tttcagttgg cgggtacagt ggaaatcact ttcatgcctt ctcggatacc
      541 ataatccctt tgtacgaaac ttctcgaaag tttaatagag aagtgcggtt tcttatggcg
      601 aacaaaaatt cgttttggac aaacaagttc caagaggtat tgaacaaact atcaaggtat
      661 gaaattattg acattgataa cgaaaatgaa gtacattgct ttccgagtat gatagttggt
      721 ttaaaaaaag acgatcgaaa agagctaaac atagattcaa tgaaggattt ctccaagttt
      781 ttgaggagtt cctattcatt agaacgatca accgcaataa atatgacaaa aagtatcaat
      841 aaaaggcccc ggatcttgat agtttcaagg aagaaaacac gagcgtttac aaacattaaa
      901 tatttggttc gtgtagcacg agacttgggg tttgaggtta ttgtaagtga gatgaatgcg
      961 aatttgacgc gtatttctag gcttgtaaac tcgtgtgatg tgatgatggg agttcatggg
     1021 gcagggctaa ccaacattgt ttttttacct gaaaatggtg tgtttataca agtggttcca
     1081 ttagggaaaa tggattggat ggcaaacacc ttttatggag agccttcaaa ggggatggga
     1141 ttgaagtatt tggagtatga gataagtgaa aaggaaagca gtttgatcga tcaatatccg
     1201 cgtaatcatc aagtgtttat ggatccgtat tcgattcaaa acaaaggttg ggaagcttat
     1261 agatcagttt atatggacag acaaaatgtg aaacttgatg ttgttaggct taaagagaca
     1321 ttgtccaaag ccattgaact tctttgttag
//
LOCUS       XM_071832664            1425 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-1,2-xylosyltransferase
            XYXT1-like (LOC139842533), mRNA.
ACCESSION   XM_071832664
VERSION     XM_071832664.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 69% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1425
                     /gene="LOC139842533"
                     /note="beta-1,2-xylosyltransferase XYXT1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842533"
     CDS             1..1425
                     /gene="LOC139842533"
                     /codon_start=1
                     /product="beta-1,2-xylosyltransferase XYXT1-like"
                     /protein_id="XP_071688765.1"
                     /db_xref="GeneID:139842533"
                     /translation="MVMLSASQVDQQIGGQEGKMNIVPLNDSSHNVNYTNSKISAKAP
                     LDHEPTSSIPPILVNHNENRSRSLEPSSKPTHIPASESRNDSFNDPHELLNSIDCTFS
                     EPSSDYCKIEGMVRIDGHTSTIFTTIFARNNESLTIKPYPRKGTGAMDSVRQWTIKPV
                     YDQDMPNCNTTHTEPALIFSTGGFSGNHFHDFSDIIIPLFANSRIFNGKVHLLVTNYK
                     SWWISKFQRLLNSLSDHQVVDIDSQKQIHCYENAIIGHKFYKELTMDSLNPVNGYLMK
                     DFRDFLRSTYSLERREVLQVKSIDNRRPRLMIISRKSTRRITNEASVVKMAKKIGYEV
                     IIANETLTTSRLSSFAKIVNSCDVLMGVHGAGLTNMVFLPDHAVVVQVVPLGGLEGIA
                     KMDFGEPSKEMNLRYLKYSISVKESSLSTQYAADDVVLRDPIVIHKQGWNALKKIYLT
                     EQNVKLDVRKFRSTLLKALKLLHH"
     misc_feature    523..>1152
                     /gene="LOC139842533"
                     /note="Glycosyltransferase 61; Region: Glyco_transf_61;
                     cl15705"
                     /db_xref="CDD:472831"
ORIGIN      
        1 atggttatgc taagcgcgtc ccaagtcgat caacaaatag ggggacaaga agggaaaatg
       61 aatatagtac cgttaaatga ttcgtcccat aatgtgaact acacaaatag taaaatatct
      121 gcaaaggctc cattggatca tgaaccgacg tcgagtattc ctccaatatt agtcaaccac
      181 aacgagaata gaagtcgaag cttggagcct tcgagtaaac cgacacatat tccagcctct
      241 gaaagtagaa atgatagctt taacgatcct catgaactgc tcaactcaat agattgcacc
      301 ttctctgaac catcatcaga ttactgcaag atcgaaggga tggtaagaat tgatgggcat
      361 acttccacca tatttactac cattttcgct cgaaacaacg aatcattgac cataaaaccc
      421 tacccaagaa aaggaaccgg agctatggac tcagttcgac aatggacgat aaaaccagtt
      481 tacgatcaag atatgccaaa ctgcaacaca actcacaccg aaccagccct cattttttcg
      541 actggtggtt tttcaggaaa ccattttcac gatttctccg atatcataat tccattgttt
      601 gcgaattcgc gaatttttaa tggtaaagtg catcttttag taacaaatta caaaagttgg
      661 tggatttcaa agtttcaaag attactaaac agtctttcgg atcatcaagt tgttgatatt
      721 gatagccaga agcagataca ttgctacgaa aacgcgatca ttggtcataa attttacaaa
      781 gagctaacca tggactcatt aaatccggtc aacggttact tgatgaaaga ctttcgtgac
      841 tttttgaggt caacgtactc tttagaaaga cgagaagtac tacaggttaa atctatcgat
      901 aaccgaagac ctcgtttaat gataatatca agaaaaagta cacgaaggat aacaaacgaa
      961 gcgagtgttg taaagatggc taaaaagatt gggtatgaag taattatagc gaacgaaaca
     1021 cttactacta gtcgcctttc gagttttgct aaaatagtga attcttgtga tgttttaatg
     1081 ggagtacatg gagccgggct aaccaacatg gtgttcttac cggaccatgc ggtagtggtg
     1141 caagtggtcc cacttggtgg gctcgagggg atcgcgaaaa tggactttgg tgaaccatca
     1201 aaagagatga acttgaggta cttgaagtat agtataagtg ttaaagaaag ctcattgtca
     1261 acacaatatg cagcagacga tgtcgtttta agagatccaa ttgtgataca taaacaaggg
     1321 tggaatgcac ttaagaaaat ttacttgact gaacagaatg taaagcttga tgttagaaaa
     1381 tttagatcaa ctttgttgaa agctttaaag cttctacacc actaa
//
LOCUS       XR_011757441            1509 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842534), transcript variant X1, ncRNA.
ACCESSION   XR_011757441
VERSION     XR_011757441.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1509
                     /gene="LOC139842534"
                     /note="uncharacterized LOC139842534; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842534"
     ncRNA           1..1509
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842534"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139842534"
ORIGIN      
        1 tccccatcaa caattattga aacccccctc tcttctgaaa ctagttcacc accgcacccc
       61 tctctcttcc ccccctctct cttctaaaat ctaaaccctt ttgacttaca ccggagatta
      121 tgaccgccca ctgccgcaaa cgaccgcgcc actagcacta atttatccgt cacaatttta
      181 cgcacctaat ggtataaatt ttgtaatcat gcgattgtat tttttttgcc ctaattttct
      241 attttgatct caacaacggt gatgcgatgg ctgccgtagt tggtaaggtt ctccgctgtt
      301 acaataactc gatggtattg atgaaaacat aatcgatgtt tttgattgcc gacaaatcaa
      361 gggacttaat aacaagttca taacctaatt cggatgtttc ctcactggtt gaattaacta
      421 cttttgttgt ttcatgattc agttatcatg gttgattcgt acattatcat cacagtcgtt
      481 cgggtcgaga cctatttctg tcatcggtgt gtcttgcaaa gtatttttct tgattaatcg
      541 attcttaatc aatacgtgat tatctcacat tgaaagcata ttcgtttgca aaacggattt
      601 gaatgcaact tttgcaaaac ggatttgaat acaacttttt gaatacaaca tactttggtg
      661 atgttttgca ctgatgcagt tgaatttcct gaagcgtttt acttagattg gtgttacgag
      721 ttgttttata agtgagtttc ctaaaaaact attgttgaag ttgaagttca gtagatgcat
      781 taggtaaaat gcttatatac acatcttttt attgtattag aatgtattta tttatttatt
      841 tgcacttcaa atgtttgata aaatgcttga acgaatatat agttgatgca agtattttat
      901 gaactaatct cttaacagat tccagttttg aatggagact gattttgttt caagtttgat
      961 gggtattaat tttggtacct ctacccactg ccgtgtggat gcagaaggtg acctttttaa
     1021 tgtgaatcca caatgtttag gttaacaagt tattaaagtt atgtagtcac agctatgttg
     1081 tctaatacat tttggtgaat atgcgattta gttgatcagc ggttttgaga attgaaactt
     1141 tgaggggcat gttgatccgt tgacaagagc aatctactat caagctgaag gtatggctgg
     1201 tattcatact cctaaagtgt aaattttttt caaccccatt ttggcatcgt tatacataat
     1261 catatttttg ttatgttagt aaacgaaaat tgtacctgtt tgttatttat cttatgaagg
     1321 tataaggata ggaagaaaaa aaatatgaat tattaagaaa ttagggacgt actgtaacaa
     1381 gggataaatt aggatttgtt atgaccaatt gggttgaaaa gtgcaaagtt gagttaaatt
     1441 gacgatttac ctatgtttat ataattagaa gtttatttgg aaatgaaatt tcgaaagtta
     1501 tatatggtt
//
LOCUS       XR_011757442            1458 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842534), transcript variant X2, ncRNA.
ACCESSION   XR_011757442
VERSION     XR_011757442.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1458
                     /gene="LOC139842534"
                     /note="uncharacterized LOC139842534; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842534"
     ncRNA           1..1458
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842534"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139842534"
ORIGIN      
        1 tccccatcaa caattattga aacccccctc tcttctgaaa ctagttcacc accgcacccc
       61 tctctcttcc ccccctctct cttctaaaat ctaaaccctt ttgacttaca ccggagatta
      121 tgaccgccca ctgccgcaaa cgaccgcgcc actagcacta atttatccgt cacaatttta
      181 cgcacctaat ggtataaatt ttgtaatcat gcgattgtat tttttttgcc ctaattttct
      241 attttgatct caacaacggt gatgcgatgg ctgccgtagt tggtaaggtt ctccgctgtt
      301 acaataactc gatggtattg atgaaaacat aatcgatgtt tttgattgcc gacaaatcaa
      361 gggacttaat aacaagttca taacctaatt cggatgtttc ctcactggtt gaattaacta
      421 cttttgttgt ttcatgattc agttatcatg gttgattcgt acattatcat cacagtcgtt
      481 cgggtcgaga cctatttctg tcatcggtgt gtcttgcaaa gtatttttct tgattaatcg
      541 attcttaatc aatacgtgat tatctcacat tgaaagcata ttcgtttgca aaacggattt
      601 gaatgcaact tttgcaaaac ggatttgaat acaacttttt gaatacaaca tactttggtg
      661 atgttttgca ctgatgcagt tgaatttcct gaagcgtttt acttagattg gtgttacgag
      721 ttgttttata agtgagtttc ctaaaaaact attgttgaag ttgaagttca gtagatgcat
      781 taggtaaaat gcttatatac acatcttttt attgtattag aatgtattta tttatttatt
      841 tgcacttcaa atgtttgata aaatgcttga acgaatatat agttgatgca agtattttat
      901 gaactaatct cttaacagat tccagttttg aatggagact gattttgttt caagtttgat
      961 gggtattaat tttggtacct ctacccactg ccgtgtggat gcagaagtta tgtagtcaca
     1021 gctatgttgt ctaatacatt ttggtgaata tgcgatttag ttgatcagcg gttttgagaa
     1081 ttgaaacttt gaggggcatg ttgatccgtt gacaagagca atctactatc aagctgaagg
     1141 tatggctggt attcatactc ctaaagtgta aatttttttc aaccccattt tggcatcgtt
     1201 atacataatc atatttttgt tatgttagta aacgaaaatt gtacctgttt gttatttatc
     1261 ttatgaaggt ataaggatag gaagaaaaaa aatatgaatt attaagaaat tagggacgta
     1321 ctgtaacaag ggataaatta ggatttgtta tgaccaattg ggttgaaaag tgcaaagttg
     1381 agttaaattg acgatttacc tatgtttata taattagaag tttatttgga aatgaaattt
     1441 cgaaagttat atatggtt
//
LOCUS       XR_011757443            1383 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842534), transcript variant X3, ncRNA.
ACCESSION   XR_011757443
VERSION     XR_011757443.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1383
                     /gene="LOC139842534"
                     /note="uncharacterized LOC139842534; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842534"
     ncRNA           1..1383
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842534"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139842534"
ORIGIN      
        1 tccccatcaa caattattga aacccccctc tcttctgaaa ctagttcacc accgcacccc
       61 tctctcttcc ccccctctct cttctaaaat ctaaaccctt ttgacttaca ccggagatta
      121 tgaccgccca ctgccgcaaa cgaccgcgcc actagcacta atttatccgt cacaatttta
      181 cgcacctaat ggtataaatt ttgtaatcat gcgattgtat tttttttgcc ctaattttct
      241 attttgatct caacaacggt gatgcgatgg ctgccgtagt tggtaaggtt ctccgctgtt
      301 acaataactc gatggtattg atgaaaacat aatcgatgtt tttgattgcc gacaaatcaa
      361 gggacttaat aacaagttca taacctaatt cggatgtttc ctcactggtt gaattaacta
      421 cttttgttgt ttcatgattc agttatcatg gttgattcgt acattatcat cacagtcgtt
      481 cgggtcgaga cctatttctg tcatcggtgt gtcttgcaaa tttatgcgca ggtgatgttt
      541 tgcactgatg cagttgaatt tcctgaagcg ttttacttag attggtgtta cgagttgttt
      601 tataagtgag tttcctaaaa aactattgtt gaagttgaag ttcagtagat gcattaggta
      661 aaatgcttat atacacatct ttttattgta ttagaatgta tttatttatt tatttgcact
      721 tcaaatgttt gataaaatgc ttgaacgaat atatagttga tgcaagtatt ttatgaacta
      781 atctcttaac agattccagt tttgaatgga gactgatttt gtttcaagtt tgatgggtat
      841 taattttggt acctctaccc actgccgtgt ggatgcagaa ggtgaccttt ttaatgtgaa
      901 tccacaatgt ttaggttaac aagttattaa agttatgtag tcacagctat gttgtctaat
      961 acattttggt gaatatgcga tttagttgat cagcggtttt gagaattgaa actttgaggg
     1021 gcatgttgat ccgttgacaa gagcaatcta ctatcaagct gaaggtatgg ctggtattca
     1081 tactcctaaa gtgtaaattt ttttcaaccc cattttggca tcgttataca taatcatatt
     1141 tttgttatgt tagtaaacga aaattgtacc tgtttgttat ttatcttatg aaggtataag
     1201 gataggaaga aaaaaaatat gaattattaa gaaattaggg acgtactgta acaagggata
     1261 aattaggatt tgttatgacc aattgggttg aaaagtgcaa agttgagtta aattgacgat
     1321 ttacctatgt ttatataatt agaagtttat ttggaaatga aatttcgaaa gttatatatg
     1381 gtt
//
LOCUS       XR_011757444            1372 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842534), transcript variant X4, ncRNA.
ACCESSION   XR_011757444
VERSION     XR_011757444.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1372
                     /gene="LOC139842534"
                     /note="uncharacterized LOC139842534; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842534"
     ncRNA           1..1372
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842534"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139842534"
ORIGIN      
        1 tccccatcaa caattattga aacccccctc tcttctgaaa ctagttcacc accgcacccc
       61 tctctcttcc ccccctctct cttctaaaat ctaaaccctt ttgacttaca ccggagatta
      121 tgaccgccca ctgccgcaaa cgaccgcgcc actagcacta atttatccgt cacaatttta
      181 cgcacctaat ggtataaatt ttgtaatcat gcgattgtat tttttttgcc ctaattttct
      241 attttgatct caacaacggt gatgcgatgg ctgccgtagt tggtaaggtt ctccgctgtt
      301 acaataactc gatggtattg atgaaaacat aatcgatgtt tttgattgcc gacaaatcaa
      361 gggacttaat aacaagttca taacctaatt cggatgtttc ctcactggtt gaattaacta
      421 cttttgttgt ttcatgattc agttatcatg gttgattcgt acattatcat cacagtcgtt
      481 cgggtcgaga cctatttctg tcatcggtgt gtcttgcaaa gtgatgtttt gcactgatgc
      541 agttgaattt cctgaagcgt tttacttaga ttggtgttac gagttgtttt ataagtgagt
      601 ttcctaaaaa actattgttg aagttgaagt tcagtagatg cattaggtaa aatgcttata
      661 tacacatctt tttattgtat tagaatgtat ttatttattt atttgcactt caaatgtttg
      721 ataaaatgct tgaacgaata tatagttgat gcaagtattt tatgaactaa tctcttaaca
      781 gattccagtt ttgaatggag actgattttg tttcaagttt gatgggtatt aattttggta
      841 cctctaccca ctgccgtgtg gatgcagaag gtgacctttt taatgtgaat ccacaatgtt
      901 taggttaaca agttattaaa gttatgtagt cacagctatg ttgtctaata cattttggtg
      961 aatatgcgat ttagttgatc agcggttttg agaattgaaa ctttgagggg catgttgatc
     1021 cgttgacaag agcaatctac tatcaagctg aaggtatggc tggtattcat actcctaaag
     1081 tgtaaatttt tttcaacccc attttggcat cgttatacat aatcatattt ttgttatgtt
     1141 agtaaacgaa aattgtacct gtttgttatt tatcttatga aggtataagg ataggaagaa
     1201 aaaaaatatg aattattaag aaattaggga cgtactgtaa caagggataa attaggattt
     1261 gttatgacca attgggttga aaagtgcaaa gttgagttaa attgacgatt tacctatgtt
     1321 tatataatta gaagtttatt tggaaatgaa atttcgaaag ttatatatgg tt
//
LOCUS       XR_011757445            1369 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842534), transcript variant X5, ncRNA.
ACCESSION   XR_011757445
VERSION     XR_011757445.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1369
                     /gene="LOC139842534"
                     /note="uncharacterized LOC139842534; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842534"
     ncRNA           1..1369
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842534"
                     /product="uncharacterized lncRNA, transcript variant X5"
                     /db_xref="GeneID:139842534"
ORIGIN      
        1 tccccatcaa caattattga aacccccctc tcttctgaaa ctagttcacc accgcacccc
       61 tctctcttcc ccccctctct cttctaaaat ctaaaccctt ttgacttaca ccggagatta
      121 tgaccgccca ctgccgcaaa cgaccgcgcc actagcacta atttatccgt cacaatttta
      181 cgcacctaat ggtataaatt ttgtaatcat gcgattgtat tttttttgcc ctaattttct
      241 attttgatct caacaacggt gatgcgatgg ctgccgtagt tggtaaggtt ctccgctgtt
      301 acaataactc gatggtattg atgaaaacat aatcgatgtt tttgattgcc gacaaatcaa
      361 gggacttaat aacaagttca taacctaatt cggatgtttc ctcactggtt gaattaacta
      421 cttttgttgt ttcatgattc agttatcatg gttgattcgt acattatcat cacagtcgtt
      481 cgggtcgaga cctatttctg tcatcgttta tgcgcaggtg atgttttgca ctgatgcagt
      541 tgaatttcct gaagcgtttt acttagattg gtgttacgag ttgttttata agtgagtttc
      601 ctaaaaaact attgttgaag ttgaagttca gtagatgcat taggtaaaat gcttatatac
      661 acatcttttt attgtattag aatgtattta tttatttatt tgcacttcaa atgtttgata
      721 aaatgcttga acgaatatat agttgatgca agtattttat gaactaatct cttaacagat
      781 tccagttttg aatggagact gattttgttt caagtttgat gggtattaat tttggtacct
      841 ctacccactg ccgtgtggat gcagaaggtg acctttttaa tgtgaatcca caatgtttag
      901 gttaacaagt tattaaagtt atgtagtcac agctatgttg tctaatacat tttggtgaat
      961 atgcgattta gttgatcagc ggttttgaga attgaaactt tgaggggcat gttgatccgt
     1021 tgacaagagc aatctactat caagctgaag gtatggctgg tattcatact cctaaagtgt
     1081 aaattttttt caaccccatt ttggcatcgt tatacataat catatttttg ttatgttagt
     1141 aaacgaaaat tgtacctgtt tgttatttat cttatgaagg tataaggata ggaagaaaaa
     1201 aaatatgaat tattaagaaa ttagggacgt actgtaacaa gggataaatt aggatttgtt
     1261 atgaccaatt gggttgaaaa gtgcaaagtt gagttaaatt gacgatttac ctatgtttat
     1321 ataattagaa gtttatttgg aaatgaaatt tcgaaagtta tatatggtt
//
LOCUS       XR_011757446            1405 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842534), transcript variant X6, ncRNA.
ACCESSION   XR_011757446
VERSION     XR_011757446.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1405
                     /gene="LOC139842534"
                     /note="uncharacterized LOC139842534; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842534"
     ncRNA           1..1405
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842534"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:139842534"
ORIGIN      
        1 tccccatcaa caattattga aacccccctc tcttctgaaa ctagttcacc accgcacccc
       61 tctctcttcc ccccctctct cttctaaaat ctaaaccctt ttgacttaca ccggagatta
      121 tgaccgccca ctgccgcaaa cgaccgcgcc actagcacta atttatccgt cacaatttta
      181 cgcacctaat ggtataaatt ttgtaatcat gcgattgtat tttttttgcc ctaattttct
      241 attttgatct caacaacggt gatgcgatgg ctgccgtagt tggtaaggtt ctccgctgtt
      301 acaataactc gatggtattg atgaaaacat aatcgatgtt tttgattgcc gacaaatcaa
      361 gggacttaat aacaagttca taacctaatt cggatgtttc ctcactggtt gaattaacta
      421 cttttgttgt ttcatgattc agttatcatg gttgattcgt acattatcat cacagtcgtt
      481 cgggtcgaga cctatttctg tcatcggtgt gtcttgcaaa gtatttttct tgattaatcg
      541 attcttaatc aatacgtgat tatctcacat tgaaagcata ttcgtttgca aaacggattt
      601 gaatgcaact tttgcaaaac ggatttgaat acaacttttt gaatacaaca tactttggtg
      661 atgttttgca ctgatgcagt tgaatttcct gaagcgtttt acttagattg gtgttacgag
      721 ttgttttata agtgagtttc ctaaaaaact attgttgaag ttgaagttca gtagatgcat
      781 taggtaaaat gcttatatac acatcttttt attgtattag aatgtattta tttatttatt
      841 tgcacttcaa atgtttgata aaatgcttga acgaatatat agttgatgca agtattttat
      901 gaactaatct cttaacagat tccagttttg aatggagact gattttgttt caagtttgat
      961 gggtattaat tttggtacct ctacccactg ccgtgtggat gcagaagttg atcagcggtt
     1021 ttgagaattg aaactttgag gggcatgttg atccgttgac aagagcaatc tactatcaag
     1081 ctgaaggtat ggctggtatt catactccta aagtgtaaat ttttttcaac cccattttgg
     1141 catcgttata cataatcata tttttgttat gttagtaaac gaaaattgta cctgtttgtt
     1201 atttatctta tgaaggtata aggataggaa gaaaaaaaat atgaattatt aagaaattag
     1261 ggacgtactg taacaaggga taaattagga tttgttatga ccaattgggt tgaaaagtgc
     1321 aaagttgagt taaattgacg atttacctat gtttatataa ttagaagttt atttggaaat
     1381 gaaatttcga aagttatata tggtt
//
LOCUS       XM_071832665            1722 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842535), mRNA.
ACCESSION   XM_071832665
VERSION     XM_071832665.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1722
                     /gene="LOC139842535"
                     /note="uncharacterized LOC139842535; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842535"
     CDS             1..1722
                     /gene="LOC139842535"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688766.1"
                     /db_xref="GeneID:139842535"
                     /translation="MKLKDPSAVQATNMIRPVSANEVKRAIFDVDNHKSPGPDGFTSE
                     FFKSSREIVGDEITLAMQDFFKNGQLLTTLNHIVMALIPKVDVPSKVTDYRPIACCNV
                     LYKCISKIIANRIKDSLGDIVNINQSAFIPGRRISDNILLTQELMRNYHLNKGTPMCA
                     FKVDIQKAYDTVSWDFLKAILLQFGFHSVMVKWIMKFVSTVSFSININGELHGFFKGK
                     RGLRQGDPLSPYLFTLVMEVLTLLLAKNAREIDMFKFHPKSASIKEIETLLKGFLWCQ
                     GTLKKGKAKVKWKDVCLPKSEGGLGIKNLREWNTALISTHIWNFWVVDVPSNASWSWR
                     KILGVRNDLRGRFFNIVRNGNWTNVWYDVWTELGPLAELITPRMVHQSGLNLTLSVRD
                     FVEQNGLNWPTEWLDRYPQLGSIVQPNLSLDNDGIKWRDMENHLHEFSVHQEKLKTRD
                     KLKSWEVTANNGMVCSLCDQTPDSHDHLFFQFQFSKEVWHRVKSHMEFPIFSDNWKDF
                     SLLERNNRLFKKKKRTVDQVYKAIYATVILKLMSIKWKTSPRTIRLNLVVLRDFRTLL
                     LPLGYSL"
     misc_feature    226..>744
                     /gene="LOC139842535"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(490..507,667..669)
                     /gene="LOC139842535"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    670..672
                     /gene="LOC139842535"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <1327..1464
                     /gene="LOC139842535"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaagttaa aagacccatc cgcggttcaa gcgactaata tgatacgtcc ggtctcagct
       61 aatgaagtta aaagagccat ctttgatgtt gataatcata aatctccggg tccggatggg
      121 tttacttcag agttctttaa atcttcacgg gagattgttg gtgatgagat tacgctagct
      181 atgcaagact tctttaaaaa tggtcagctt ctcacgacgt taaatcatat tgtcatggct
      241 ttaattccta aggtggatgt tccgagtaag gtaacagatt atcggccgat tgcgtgttgt
      301 aatgtgcttt ataagtgcat tagtaaaata attgctaatc ggataaaaga ctctcttggt
      361 gatattgtga acataaatca atcggccttc attcctggga ggagaatttc agacaatatt
      421 ctattgacac aagagttgat gcgaaattac catctaaata agggcacccc catgtgcgct
      481 ttcaaagtgg atattcaaaa ggcatacgat acggtaagct gggatttttt aaaagccatt
      541 ctgttgcaat tcggttttca cagtgttatg gtgaagtgga tcatgaagtt tgtttccacg
      601 gtctcgtttt cgattaacat taatggtgaa cttcatggtt ttttcaaagg caaaagaggg
      661 ctacgacaag gtgatcccct atctccttat ttatttacgc ttgttatgga ggttttaacc
      721 cttttattag caaaaaatgc gcgtgagatt gatatgttta agtttcaccc gaaatctgcc
      781 tctataaagg agattgaaac tttgttgaag ggctttttgt ggtgtcaagg tacccttaaa
      841 aagggtaagg caaaggtaaa gtggaaagat gtgtgtctcc cgaagtcgga agggggattg
      901 ggtattaaaa acttaagaga gtggaatacc gcattgattt caactcacat ttggaacttt
      961 tgggttgtcg atgtcccgtc taatgcaagt tggagttggc gaaaaatctt aggagtgcgt
     1021 aatgatctcc gaggtcggtt cttcaatatt gtgcgtaatg ggaattggac taatgtgtgg
     1081 tatgatgtgt ggactgagct aggcccgcta gctgagttga ttactcctcg catggtccac
     1141 caatcggggc ttaatttaac tctttctgtt cgagattttg tggaacaaaa tgggctcaat
     1201 tggcccactg agtggctgga tcggtatcca caattaggca gtattgtgca gcctaattta
     1261 tccctggata atgatggtat taaatggcga gatatggaaa atcaccttca tgagttttcg
     1321 gttcatcagg aaaaattaaa gactcgagat aaacttaaga gttgggaagt gacggccaat
     1381 aatggtatgg tttgttcttt atgtgatcaa acgcctgact cgcatgacca tttgtttttt
     1441 cagttccaat tttctaaaga agtgtggcat cgagttaaat cgcatatgga gtttcccata
     1501 tttagtgata attggaagga tttttcgctt ctggagcgga acaataggtt gtttaagaag
     1561 aagaaaagga cggtggatca ggtgtacaag gctatttacg caactgttat attgaagcta
     1621 atgtccatca aatggaagac ttctccccgg acgatccgtc taaacttggt tgttttgaga
     1681 gactttagga cactcctatt gccattgggc tactctttgt aa
//
LOCUS       XM_071832666             915 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides expansin-A9-like
            (LOC139842537), mRNA.
ACCESSION   XM_071832666
VERSION     XM_071832666.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..915
                     /gene="LOC139842537"
                     /note="expansin-A9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 85
                     Proteins"
                     /db_xref="GeneID:139842537"
     CDS             1..882
                     /gene="LOC139842537"
                     /codon_start=1
                     /product="expansin-A9-like"
                     /protein_id="XP_071688767.1"
                     /db_xref="GeneID:139842537"
                     /translation="MASSLNIICWFWLLLVILPYCYANMINPVSRTKHPKHHKHPTNP
                     NHPKHPKNPNHPKQSKTKFCPGPWKDAHATFYGGSDGTESMGGACGYEDVKQRGYGVQ
                     NTALSQALFNNGQTCGACFEIKCVNNDKWCKPNGPPIVVTATNYCPPNFNQPGNAGGW
                     CNPPNEHFDLSQPSFLQIAEYKAGITPVQYRRVPCNKQGGIRFTINGNPYFTMVLVWN
                     VGGAGDVTGMEVKGHESVKWNTMSRNWGQKWVTNVVLVGQSLSFRVRTSDQRTSTSLH
                     VAPRNWQFGQTFEGKNF"
     misc_feature    202..879
                     /gene="LOC139842537"
                     /note="expansin A; Provisional; Region: PLN00050"
                     /db_xref="CDD:165628"
ORIGIN      
        1 atggcgtcat ctttgaacat tatttgttgg ttttggttgc ttcttgttat tttgccatat
       61 tgttacgcaa acatgatcaa tccggtatca agaaccaagc atcctaagca ccataagcat
      121 ccaacgaacc caaaccaccc taagcatcca aagaacccaa accacccgaa acaatcgaaa
      181 actaaatttt gccctggtcc atggaaggac gctcatgcta cattctatgg aggaagcgat
      241 ggtacagagt caatgggggg agcatgtggt tacgaagacg taaaacaaag aggatatggg
      301 gtacaaaaca cggcattgag tcaagcttta ttcaacaacg gccaaacatg tggtgcttgt
      361 tttgaaataa aatgcgttaa caacgacaaa tggtgcaaac caaacggtcc acctattgtc
      421 gttacggcca caaactactg tccacccaac tttaatcaac caggcaatgc tggcggttgg
      481 tgcaaccccc cgaatgagca tttcgacttg tctcaaccat cgtttcttca aatagccgag
      541 tacaaagctg gcattactcc agtccaatac cgaagggttc catgcaataa gcaaggagga
      601 atccgattta caataaacgg gaatccatat ttcacgatgg tattagtatg gaacgttgga
      661 ggtgcaggtg atgtaacggg aatggaagta aagggacatg agagcgttaa gtggaatacg
      721 atgagtagaa attggggtca gaaatgggtg actaatgttg ttttagtagg ccaatcgctc
      781 agttttcggg ttcgaacaag cgatcaacga acatcaacct cgttacatgt tgcacctaga
      841 aattggcagt ttggtcaaac cttcgaaggc aaaaatttct agtagattaa agacatgacg
      901 cgagtgctac attag
//
LOCUS       XM_071832668             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842538), mRNA.
ACCESSION   XM_071832668
VERSION     XM_071832668.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139842538"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139842538"
     CDS             1..780
                     /gene="LOC139842538"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688769.1"
                     /db_xref="GeneID:139842538"
                     /translation="MECEIGSSVKNPGFTRCAHEQAVYVKESSKDLLIVGVYVDDLIV
                     TGASETLVSTFKKEMMKMFDMSDLGMLSYYLGIEVCQSKGTITISHAGYAKKIIQCAG
                     MAECNPCKYPMEAKLKLTKDEDGVDVNATDYRRLIGSLSYLVNTRPDISYSVGVISRF
                     MESLKVSHLNALKQIVRYIKGTTDYGLVYRRGGDGKLLGYSNSSHGVDIIDRKGTTGM
                     VFYFSGNLISWNSSKQKTMALSSCEAEFIAAKMAACQALCL"
     misc_feature    <13..342
                     /gene="LOC139842538"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    595..>777
                     /gene="LOC139842538"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggaatgcg agattggatc aagtgttaaa aatccgggtt ttacgcgttg tgctcatgag
       61 caagcagttt atgtaaaaga aagctcgaaa gacttgctca tagttggagt ttatgtcgat
      121 gatctaatcg taactggtgc gtctgaaact cttgtcagca cattcaaaaa ggagatgatg
      181 aaaatgttcg acatgagtga cttgggaatg ctctcgtatt atcttggaat agaagtgtgc
      241 caaagcaaag gaacaattac tattagtcat gcggggtatg cgaagaagat cattcagtgt
      301 gcgggaatgg cagaatgtaa tccttgcaaa tatccaatgg aggcaaaact caaattaaca
      361 aaagatgagg atggtgtgga tgtaaatgcc acagattata gacgactcat tggaagtctt
      421 agctatctcg tcaacacaag acccgatatt agttactcgg tgggagtaat tagtaggttc
      481 atggagtctc tgaaagtaag tcatctcaat gcactcaagc aaatagtcag atacatcaaa
      541 ggaactactg attacgggtt ggtgtatcga cgaggtggtg atgggaagtt gctcggatac
      601 agtaatagta gccatggagt tgatatcatt gatcgcaaag gtaccactgg tatggttttc
      661 tatttttcag ggaacctgat ctcatggaac tcaagcaaac aaaagacgat ggcactctcc
      721 tcttgtgagg cagagtttat tgcggcaaaa atggcggcat gtcaagcgtt gtgcctgtga
//
LOCUS       XM_071832669            1987 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides golgin candidate 2
            (LOC139842541), mRNA.
ACCESSION   XM_071832669
VERSION     XM_071832669.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1987
                     /gene="LOC139842541"
                     /note="golgin candidate 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842541"
     CDS             1..1818
                     /gene="LOC139842541"
                     /codon_start=1
                     /product="golgin candidate 2"
                     /protein_id="XP_071688770.1"
                     /db_xref="GeneID:139842541"
                     /translation="MSGWISSKLKVAETLLQQIDQQAAESLRKNEASSRSDNDDDLNL
                     SAAAAPVPKKPPVDIIKDQLKKKKPDKTEFVANFKVADNDLNPKSSNSSLTDTDWTEL
                     LSAPSPSKGNISINPRGKRQARSGSNLSALDTKRTQPSASRRSTDNVLAGGDKSKAVV
                     TTVAANNVIDNGTKSQLSPAPVSTNINSDNSLDVSDLNDEILPEKQSSAAQNVHVKNE
                     KIAAVPVISVSRKMSASDVDLNIETDSDTSSDSESETEREERRKRREQLLAEKAAAKA
                     IETIKNLENLVARLEGEKQSLEKTIDDRSKQQAREASELQMTMMETMEAVDIEKQKHN
                     NTRMEALMKLAKLETTNSELAKSLATAQWNLEVEVKRVAELHRQIELKEANNEELTSK
                     KRNQISGNTPTTLREVEFEYEVLEAELSFVADKIGQLQQKARTIETNLQVTRKEMENP
                     TEVEVELKRRLGQLTDHLIQKQSQVEALSSEKAMLMFRIEAVTRSLDENKSYLNTLTN
                     NELESGGIWEVSNSKFQDKLQKGQKHIGSLVRQLDSIFLTGATFLRRNPTGRIWSFVY
                     IVCLHLWVLYIFRSHTAVSYEAGSGAVISLENISTTSSV"
     misc_feature    883..1746
                     /gene="LOC139842541"
                     /note="Golgin subfamily A member 5; Region: Golgin_A5;
                     pfam09787"
                     /db_xref="CDD:462900"
ORIGIN      
        1 atgtccggct ggatctcctc caaactcaaa gttgcagaaa ctctccttca gcagattgac
       61 cagcaagcag ctgaatcgct ccgtaaaaac gaagcatcat cgcgatctga taatgatgat
      121 gatttgaatc tttccgctgc tgctgctccg gtacctaaga aacctcctgt tgatattata
      181 aaagaccaat tgaagaaaaa gaaaccagat aagactgaat ttgttgctaa ttttaaagta
      241 gctgataatg atctgaaccc taaatctagt aatagtagtt taactgatac cgattggaca
      301 gaattgctta gtgcaccatc acctagtaaa ggtaacataa gtataaaccc tagggggaag
      361 aggcaggcac gatctggttc aaacttgtcc gctttagaca cgaaacgcac gcagcctagt
      421 gccagcagga gatcaaccga taatgtgttg gctggaggag ataaatcaaa agcagttgtt
      481 acaactgttg ctgctaataa tgtgattgat aatggaacca aaagccagtt atctcctgct
      541 cctgttagta caaatattaa tagtgataat agtttggatg tttcggactt gaatgatgaa
      601 atccttcctg aaaagcaatc atctgcagct caaaatgtac atgttaagaa tgagaaaatt
      661 gctgcagttc cggtcatttc tgtatcgaga aagatgtcag ctagtgatgt tgatttgaat
      721 atagagacag attcggatac aagttcggac tcggaaagcg aaactgaaag ggaagaacgg
      781 aggaaacgaa gggaacaact tcttgctgaa aaagctgctg ctaaagccat tgaaaccatc
      841 aaaaatcttg agaatctcgt tgctagattg gagggtgaga aacaaagctt agagaaaaca
      901 attgatgaca ggtctaaaca gcaagcacgg gaggcttcag aactgcaaat gacaatgatg
      961 gaaactatgg aagctgttga tatagagaag cagaaacata ataatacaag gatggaagca
     1021 ctaatgaagt tggctaaact tgagactaca aattctgagc ttgcgaagtc acttgctact
     1081 gcacaatgga atctagaagt agaggtgaag cgagttgcag agcttcatag acaaattgaa
     1141 ttgaaggaag ctaataatga agagctgaca tcaaagaaga gaaatcaaat aagtggaaat
     1201 acgcctacaa ctttaaggga agtggagttt gaatatgagg tacttgaggc agagctgagt
     1261 tttgtagcag ataaaattgg acaactgcaa caaaaggcaa ggaccattga aacaaattta
     1321 caagtaaccc gaaaggagat ggagaatcca acagaagtgg aggttgaact caagaggagg
     1381 ctcggccaac taactgatca tttgattcag aaacaatctc aggttgaggc gctatcgtct
     1441 gagaaggcta tgctaatgtt tagaattgag gctgtgacaa ggtcactgga cgagaacaaa
     1501 tcatatttga acacattaac aaataatgaa ttagaatcag gagggatttg ggaggtctca
     1561 aattcaaagt ttcaagataa gctccaaaag gggcagaaac atatagggtc attggtgcga
     1621 caactggact ctatcttttt gacaggtgct acatttttaa gaagaaatcc gactggaagg
     1681 atatggtcgt tcgtttacat tgtttgttta cacctttggg tgttgtatat ttttagatcg
     1741 cataccgcag tgtcttatga agctggatca ggtgcagtta tttccttgga aaatattagc
     1801 accactagta gtgtgtgatt aaacatgtaa catttacagg tctacatagt ctagtgtata
     1861 aacccctctt tttaatcagg gaagctactt ttttacctgt agtattcttt gatagatatt
     1921 gctgtaataa tatctagtga atatagtaac aatggtaatt aacgactgaa atatttattg
     1981 gtgactg
//
LOCUS       XM_071832670            3354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842543), mRNA.
ACCESSION   XM_071832670
VERSION     XM_071832670.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3354
                     /gene="LOC139842543"
                     /note="uncharacterized LOC139842543; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842543"
     CDS             1..3354
                     /gene="LOC139842543"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688771.1"
                     /db_xref="GeneID:139842543"
                     /translation="MDKSWMNIVHRTKDPRFESGVNEFLNFAYRGKSKSSKIPCPCKI
                     CNNFRHHNRSSVFSHLMQKGITHGYDTWVYHGESCDVSDDSDNDIPFEEGDRATDDSD
                     NDLDEMLENIGNGMWGNNWKNSDGSSSSDEKDLENLRKLFDESRQELYRGCKNYSKFS
                     FIVAILHLKTMSGWSIKSFDALLDIFRKVLPTPSLIPKNFYEAKKYRRELGFHGEKIH
                     ACVNDCILYRNEYKYHTVCPNSECKEPRYSGSDSKVPRKVLRYFPLKPRLQRLFIDKE
                     LACDMRWHKEKRVNDNNIARHPADSEAWKHLDRVYPLFAEDPRNIRLGLATDGFSLFG
                     NLSNSYSIWPVFLVVYNLPPWKCMKEPYMLMSMLIPGPKSPGINIDVYLQPLIDELNE
                     FWVGVNAYDAYRMEKFSLRAVLLWTINDFPAYGMLSGWSVKGYKACPICMNETSSQYL
                     THSRKVVYMGHRKFLICTHHWRKDKKNFNGEVDFGEPVIPKSGHEVLNDIDGAMDFSE
                     PYRFDKTRKRKYSDDTRGWKKKSIFFKLPYWPDLKLRHNIDIMHVVKNVTESFTATLF
                     NIKGKTKDTSKSREDLKDHRLKKSLHLQPHGNSFIMPMACYHFTKNEKHRVINLLKSI
                     KFPDGFASNISRCIKKEEFQLSRMKSHDFYVFIQRVLPLSIRGCLTKEVRVVLYELSE
                     FIQKLCARNVYLDVLEKQEAEIVVILCKLERLLPQSFFDIMIHLLIHLPYEAKLAGPS
                     QYRWMFPFERKIGVLKGYVKNNARPEGCIAERYLDNECLTFCSMYLNDVESAFNMTER
                     NNERIDIQGQISVFSCKGRPLGSRKICAMSANELKKIHTYILNNCHEMEKLINDHKVE
                     LEKENYNDVNERHDKQFASWLQQGSTRQQLFAPEIRILSHGPSHSVNQYSGCMVNGYR
                     FHTQSREKNRKTQNSRVIVQGCHKTNIIDFYGILQEVLELEYLGDNKRVLVFKCDWFK
                     IDDRNGLQVDKESRATSINTSRKWYRDQPYILASQAKQVFYVPDLKLGRNWHVVQSSI
                     PRALYDIPLEEVFQEQEPVLNSGIDLNMDKAPLTRGGVTVPLEIPDLSTIGGDCQSLD
                     DEGFIDSSDLESSQEEEFSEDEDDCTDSE"
     misc_feature    7..231
                     /gene="LOC139842543"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    886..1491
                     /gene="LOC139842543"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    2059..2394
                     /gene="LOC139842543"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2857..3078
                     /gene="LOC139842543"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atggacaagt cttggatgaa tatagttcat aggacaaagg atccacgatt tgaatctggt
       61 gtcaatgaat ttcttaattt tgcatatcgt ggaaagagta agtcatctaa aattccatgc
      121 ccttgcaaaa tttgcaataa tttccgccat cataatagga gtagtgtttt ttcgcattta
      181 atgcaaaaag ggattactca tggttatgat acatgggtgt atcatggtga gtcttgtgat
      241 gtatctgatg atagcgataa tgatatacca tttgaggaag gtgatagggc tactgatgat
      301 agcgataacg accttgatga aatgttagaa aacataggta acggtatgtg gggaaataac
      361 tggaagaata gtgatggatc ttcatcctct gatgaaaaag atttagaaaa tcttcgtaag
      421 ttatttgatg agtcacgtca agaactctat agaggttgta aaaattattc aaaattttcc
      481 ttcattgttg ctattttaca tttaaagaca atgagtggtt ggtctatcaa atcctttgat
      541 gccttgcttg atatctttag aaaagttttg ccaactccat cattaattcc aaagaatttc
      601 tacgaagcaa aaaaatatag acgtgagttg ggatttcatg gagaaaaaat acatgcatgt
      661 gttaatgatt gcattttata tcgaaatgag tataaatatc atactgtatg tcccaattct
      721 gagtgtaaag agcctcgtta tagtggaagt gattcaaagg taccacgaaa agtgctccga
      781 tactttccac ttaaaccgag gcttcaaagg ttgttcatag ataaagaact tgcttgtgac
      841 atgaggtggc ataaagagaa gagagtgaat gataataaca tagctagaca tcctgcagat
      901 agtgaggcgt ggaaacacct tgatagagta tatcctttat ttgcagaaga tccacgcaat
      961 atacgtctag ggttggcgac cgatggattc agtctatttg gcaacctaag taattcatat
     1021 agtatatggc ctgtttttct tgtcgtttat aacctgcctc catggaaatg tatgaaagaa
     1081 ccctacatgt taatgtctat gttgattcca ggtcccaaat cacctggaat taatatagat
     1141 gtttacctgc aacctttgat tgatgaacta aatgaatttt gggttggtgt caatgcgtat
     1201 gatgcatata gaatggagaa gttttcatta cgtgcagtcc ttttgtggac tatcaatgac
     1261 tttccggcat atggtatgct ctctggttgg agtgttaagg gctacaaagc ctgcccaata
     1321 tgcatgaatg agacctcatc tcaatacttg actcatagta gaaaagtagt gtacatgggt
     1381 catcgaaagt ttttgatatg cacacaccat tggcggaagg ataaaaagaa ttttaatggg
     1441 gaggtggatt ttggtgagcc agtcatacct aagtcaggtc atgaagttct gaatgatatt
     1501 gatggggcga tggattttag tgagccttat cgctttgata agacgagaaa acgtaaatat
     1561 agtgatgaca cacggggatg gaaaaagaaa agcatatttt tcaagcttcc atattggcct
     1621 gacctaaaat tgagacacaa catagacata atgcatgttg ttaagaatgt gacagaaagt
     1681 tttactgcta cattattcaa cattaagggt aagaccaaag acacatctaa atcacgcgag
     1741 gatttgaagg accataggct taaaaagagt ttacatttac aaccacacgg taattcattc
     1801 ataatgccaa tggcttgcta ccacttcacg aaaaatgaga aacacagagt tataaatctg
     1861 ttaaagtcaa tcaagtttcc ggatggattt gcttcaaata tatcaagatg cattaaaaag
     1921 gaagaattcc aattatcacg catgaaaagc cacgactttt atgttttcat ccaacgagtg
     1981 ttgccgttat caattagggg ttgcttgaca aaagaagttc gagtcgtgtt gtatgaacta
     2041 agcgagttta tccagaagtt atgtgcacga aatgtgtatt tagatgttct tgagaaacaa
     2101 gaagcagaaa ttgtggtcat attatgtaag ttagagcgat tgttacccca atctttcttc
     2161 gacattatga ttcacctatt gattcattta ccatatgaag caaagttggc aggcccgtct
     2221 caatatcgtt ggatgttccc ttttgagagg aaaataggtg ttctaaaggg atatgttaag
     2281 aacaatgctc gcccagaagg atgcattgct gagagatact tagataatga atgtctaaca
     2341 ttctgctcta tgtatttaaa tgatgttgag agtgcattca acatgactga acgcaacaac
     2401 gaaaggatcg atattcaagg tcaaatttct gttttctcat gcaaagggcg tccactaggt
     2461 agtcgtaaaa tatgtgctat gagtgcaaat gagcttaaga agatccacac ttacattctt
     2521 aataattgcc atgaaatgga aaaactgata aatgaccaca aagttgaact tgagaaagaa
     2581 aactataatg atgtaaatga acgtcatgat aaacaatttg cttcttggct tcaacaagga
     2641 agtactcgtc aacaattatt tgcaccagaa attcggatat tgtcacatgg accatcacat
     2701 tcagtgaatc aatatagtgg atgtatggtg aatgggtata ggtttcacac ccaaagtcgt
     2761 gaaaagaata ggaagactca aaatagtaga gtaatagtgc aaggttgtca taaaacaaac
     2821 attattgact tctatgggat attacaagaa gtgttagagt tggaatactt gggtgacaat
     2881 aaacgagtgt tagtattcaa atgtgattgg tttaagattg atgatcgaaa tgggctgcag
     2941 gttgacaaag agtctagagc aactagcatc aatacatctc gaaaatggta tagagatcaa
     3001 ccatacattc ttgcatcaca agctaaacaa gttttttatg tgcctgattt aaagttggga
     3061 agaaactggc atgttgttca aagcagtatc cctcgtgcac tatatgatat tcctttggaa
     3121 gaagtatttc aagaacaaga gcctgtttta aattcgggta ttgatttaaa tatggataag
     3181 gcacccctaa caagaggtgg agttactgtc ccactcgaaa ttccagattt atcaaccatt
     3241 ggtggtgatt gtcaaagcct cgatgatgaa ggatttattg actcttcaga tttagagtct
     3301 tctcaagaag aggagttttc tgaagatgaa gatgattgta ctgattcgga atag
//
LOCUS       XM_071832671            1488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450
            CYP736A12-like (LOC139842545), mRNA.
ACCESSION   XM_071832671
VERSION     XM_071832671.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1488
                     /gene="LOC139842545"
                     /note="cytochrome P450 CYP736A12-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139842545"
     CDS             1..1488
                     /gene="LOC139842545"
                     /codon_start=1
                     /product="cytochrome P450 CYP736A12-like"
                     /protein_id="XP_071688772.1"
                     /db_xref="GeneID:139842545"
                     /translation="MYPVTLALLLVLVGILFRLWRSTNLRHKNLPPGPTPLPIIGSLH
                     LLGNLPHRALHKLSQKYGPIMSIRLGSVQFVIVSSPDAAKLFLGTHDAIFASRPNIQA
                     AKYLSYGCKGMTFAQYGPYWRNVRKFCTVELLSPAKINGFAGMRKEEIGLMVDKLKIA
                     SKEHKVVNLSEIVGDVIESMVCRMLFGKKNDDTFVFRTIIDKSMEAIGKFNIADYVPT
                     LAPFDLQGLTKRFKSLSKELDEMLEMLIAEHEENKRTDETDFIDILLSLKHKYANNHD
                     DLSYTIDRPSMKAILLDMVAGATDTAKTSIEWILCALIKNPRVMKELQKELNTVIGDK
                     PIVEESDLTKLSYLHMVVKETFRLYPIGPLLIPHQSVDDIVISGYNIPKGTRVLVNYW
                     AFGRDPNVWSDNWDEFLPERLIGKDIDYRGSSFQLIPFGTGRRGCPGMNLGLLNINLV
                     VSNLVHCFDWVLPNRMEPSELDMQEKFGLTTPRVQPLLAIPTRRR"
     misc_feature    178..1461
                     /gene="LOC139842545"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; Region: CYP71-like; cd11072"
                     /db_xref="CDD:410695"
     misc_feature    order(289..291,364..366,376..378,400..402,541..543,
                     880..882,889..894,901..906,1081..1083,1093..1098,
                     1102..1104,1285..1296,1303..1317,1324..1329)
                     /gene="LOC139842545"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410695"
     misc_feature    order(607..609,619..621,691..693,877..879,886..891,
                     1096..1098)
                     /gene="LOC139842545"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410695"
ORIGIN      
        1 atgtatcctg ttacattagc ccttctcttg gttctagtcg gaatcttgtt tcggctatgg
       61 cgttctacta acctccgcca taaaaactta ccaccgggcc ccaccccttt accaattatc
      121 ggaagccttc acttattagg aaacctccct caccgtgcac tccacaagct gtcccaaaag
      181 tacggcccca tcatgtctat tcgtcttggg tcagtccaat ttgtgattgt gtcttcacca
      241 gacgctgcaa aactcttcct tgggacccac gatgccatat ttgcatcgcg tccgaacatt
      301 caagctgcaa agtacttatc ttatggctgc aaagggatga cctttgccca atatggtcca
      361 tattggcgga atgtaaggaa gttttgtacg gtggagcttt tgagtcctgc gaagattaat
      421 ggttttgcgg ggatgagaaa ggaagagatt gggctgatgg tggataagct gaaaattgcg
      481 tcgaaggagc acaaggttgt gaatttgagt gaaatagtag gtgacgtgat tgaatcgatg
      541 gtgtgcagga tgctttttgg caagaaaaat gatgacacat ttgttttcag gactattatt
      601 gataagagta tggaggcaat tggaaaattt aatattgcag actatgtgcc aactttagca
      661 ccttttgatc ttcagggatt gaccaagcgc ttcaagtcat taagcaagga acttgatgaa
      721 atgcttgaga tgctgatagc ggagcatgaa gaaaacaaac gaaccgacga aacagatttc
      781 attgacatac tattgtccct aaaacacaag tatgcaaata accatgatga tctatcttat
      841 accattgata gaccaagcat gaaagccatt ttattagata tggtagctgg tgccaccgac
      901 accgccaaaa cctccatcga atggatctta tgtgcactta tcaaaaaccc tagagtaatg
      961 aaagagcttc aaaaagagct caacacagtt attggagata agcccattgt tgaagaatca
     1021 gatttgacaa aattaagtta cttacacatg gtagttaagg aaacatttag gctatatcca
     1081 attggtccac ttttaatacc tcatcaatca gtagacgata ttgtgattag tggttacaat
     1141 ataccaaagg gcacacgggt ccttgtgaat tattgggcgt ttggacgcga cccaaatgtt
     1201 tggtccgaca actgggatga gttccttcct gagaggttaa ttggtaaaga tatcgactat
     1261 cgaggatctt cgtttcagct tataccgttt ggcactggaa gacgagggtg ccctggaatg
     1321 aacttgggat tgttaaatat taatttggta gtttcgaact tggtacattg ttttgattgg
     1381 gtgcttccaa accgaatgga accgagtgag ttggatatgc aagaaaagtt tgggttaacc
     1441 acaccaaggg ttcagccgtt attagccatt ccaacgcgtc gaagatga
//
LOCUS       XM_071832672            1488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cytochrome P450
            CYP736A12-like (LOC139842546), mRNA.
ACCESSION   XM_071832672
VERSION     XM_071832672.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1488
                     /gene="LOC139842546"
                     /note="cytochrome P450 CYP736A12-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139842546"
     CDS             1..1488
                     /gene="LOC139842546"
                     /codon_start=1
                     /product="cytochrome P450 CYP736A12-like"
                     /protein_id="XP_071688773.1"
                     /db_xref="GeneID:139842546"
                     /translation="MYPVTLALLLVLVGILFRLWRSTNLRHKNLPPGPTPLPIIGSLH
                     LLGNLPHRALHKLSQKYGPIMSIRLGSVQFVIVSSPDAAKLFLGTHDAIFASRPNIQA
                     AKYLSYGCKGMTFAQYGPYWRNVRKFCTVELLSPAKINGFAGMRKEEIGLMVDKLKIA
                     SKEHKVVNLSEIVGDVIESMVCRMLFGKKNDDTFVFRTIIDKSMEAIGKFNIADYVPT
                     LAPFDLQGLTKRFKSLSKELDEMLEMLIAEHEENKRTDETDFIDILLSLKHKYANNHD
                     DLSYTIDRPSMKAILLDMVAGATDTAKTSIEWILCALIKNPRVMKELQKELNTVIGDK
                     PIVEESDLTKLSYLHMVVKETFRLYPIGPLLIPHQSVDDIVISGYNIPKGTRVLVNYW
                     AFGRDPNVWSDNWDEFLPERLIGKDIDYRGSSFQLIPFGTGRRGCPGMNLGLLNINLV
                     VSNLVHCFDWVLPNRMEPSELDMQEKFGLTTPRVQPLLAIPTRRR"
     misc_feature    178..1461
                     /gene="LOC139842546"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; Region: CYP71-like; cd11072"
                     /db_xref="CDD:410695"
     misc_feature    order(289..291,364..366,376..378,400..402,541..543,
                     880..882,889..894,901..906,1081..1083,1093..1098,
                     1102..1104,1285..1296,1303..1317,1324..1329)
                     /gene="LOC139842546"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410695"
     misc_feature    order(607..609,619..621,691..693,877..879,886..891,
                     1096..1098)
                     /gene="LOC139842546"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410695"
ORIGIN      
        1 atgtatcctg ttacattagc ccttctcttg gttctagtcg gaatcttgtt tcggctatgg
       61 cgttctacta acctccgcca taaaaactta ccaccgggcc ccaccccttt accaattatc
      121 ggaagccttc acttattagg aaacctccct caccgtgcac tccacaagct gtcccaaaag
      181 tacggcccca tcatgtctat tcgtcttggg tcagtccaat ttgtgattgt gtcttcacca
      241 gacgctgcaa aactcttcct tgggacccac gatgccatat ttgcatcgcg tccgaacatt
      301 caagctgcaa agtacttatc ttatggctgc aaagggatga cctttgccca atatggtcca
      361 tattggcgga atgtaaggaa gttttgtacg gtggagcttt tgagtcctgc gaagattaat
      421 ggttttgcgg ggatgagaaa ggaagagatt gggctgatgg tggataagct gaaaattgcg
      481 tcgaaggagc acaaggttgt gaatttgagt gaaatagtag gtgacgtgat tgaatcgatg
      541 gtgtgcagga tgctttttgg caagaaaaat gatgacacat ttgttttcag gactattatt
      601 gataagagta tggaggcaat tggaaaattt aatattgcag actatgtgcc aactttagca
      661 ccttttgatc ttcagggatt gaccaagcgc ttcaagtcat taagcaagga acttgatgaa
      721 atgcttgaga tgctgatagc ggagcatgaa gaaaacaaac gaaccgacga aacagatttc
      781 attgacatac tattgtccct aaaacacaag tatgcaaata accatgatga tctatcttat
      841 accattgata gaccaagcat gaaagccatt ttattagata tggtagctgg tgccaccgac
      901 accgccaaaa cctccatcga atggatctta tgtgcactta tcaaaaaccc tagagtaatg
      961 aaagagcttc aaaaagagct caacacagtt attggagata agcccattgt tgaagaatca
     1021 gatttgacaa aattaagtta cttacacatg gtagttaagg aaacatttcg gctatatcca
     1081 attggtccac ttttaatacc tcatcaatca gtagacgata ttgtgattag tggttacaat
     1141 ataccaaagg gcacacgggt ccttgtgaat tattgggcgt ttggacgcga cccaaatgtt
     1201 tggtccgaca actgggatga gttccttcct gagaggttaa ttggtaaaga tatcgactat
     1261 cgaggatctt cgtttcagct tataccgttt ggcactggaa gacgagggtg tcctggaatg
     1321 aacttgggat tgttaaatat taatttggta gtttcgaact tggtacattg ttttgattgg
     1381 gtgcttccaa accgaatgga accgagtgag ttggatatgc aagaaaagtt tgggttaacc
     1441 acaccaaggg ttcagccgtt attagccatt ccaacgcgtc gaagatga
//
LOCUS       XM_071832673            1230 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842547), mRNA.
ACCESSION   XM_071832673
VERSION     XM_071832673.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1230
                     /gene="LOC139842547"
                     /note="uncharacterized LOC139842547; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842547"
     CDS             1..1230
                     /gene="LOC139842547"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688774.1"
                     /db_xref="GeneID:139842547"
                     /translation="MVLQGSAREWFHSLQARSIFGFIDLRDKFLLQFQNLLLQKKTHI
                     ECHDIKQGSKEILSALLTRLRRDVPPTFAKVQQETYDYLRGGEDSTITPACGWSKDKS
                     WRDDNDSFRDGNSDNYRGPGFSQRNGGGGYLRNDRYQGENSRRDKSKFCIFHDDYGHD
                     TNHCRDLVELIAEAYEQGKLEHLVSQGAVTTANAIILPAESNAPQVPNTADRKAPAVK
                     NLGVKMVSKKENQRGIQVINVVEVQGEISVFQISEQIASWQCSAITFTHANLSADLDK
                     PVVVSCRIANTDIMYEQCFSKLPANIKALMKPTAVSLTGFSGESTWPIGQLELHIELV
                     DDRDETLRRKALLNLYIMRNRSRFNMILGSTALRMFGAIPSTIHGMVKFSANKGIDTL
                     TSAEVEPFLCHEYGDRK"
ORIGIN      
        1 atggttttac aagggtccgc aagagagtgg tttcacagcc tgcaagctcg cagtattttt
       61 ggcttcattg atcttcgcga taaatttttg ctgcagtttc agaatctttt actgcagaaa
      121 aagacacata tagaatgtca tgatattaaa caaggaagta aagaaatctt gagtgcctta
      181 ttaacgcgat tgcgaaggga tgtcccacct actttcgcta aagtgcaaca agaaacatac
      241 gactatcttc gaggtggaga ggatagcact atcacccctg cgtgtgggtg gagtaaagat
      301 aaaagttggc gagatgacaa tgattctttt cgcgatggca atagcgataa ttaccgtggt
      361 cctggattct cgcagcgaaa tggcggtggt ggttatctgc gaaatgatag atatcaagga
      421 gaaaatagta ggcgggataa atccaaattt tgtattttcc acgacgatta cggtcatgat
      481 accaatcatt gtagagactt ggtggagctg atcgcagaag catatgagca aggcaagtta
      541 gagcatttag tttcgcaagg tgcggtaacc accgcgaatg caattatctt gcctgcagag
      601 tctaatgctc cgcaagtgcc aaacactgct gatcgcaaag ctcccgcagt gaagaatctt
      661 ggggtaaaaa tggtcagtaa gaaagaaaat caacgcggaa ttcaggtcat taatgtggta
      721 gaagtgcaag gcgaaatttc agtatttcaa atatctgaac aaattgcaag ctggcaatgt
      781 tctgctatta ctttcactca tgcaaacttg agtgcggatt tggataaacc agtggtggtt
      841 tcatgccgca ttgcgaatac tgatataatg tatgagcaat gtttcagcaa gttgcctgca
      901 aacattaaag cattgatgaa acctactgcg gtttcgctca ctggattttc aggagaatca
      961 acttggccta ttggtcagtt agaattacat attgagctag ttgatgatcg cgatgaaacg
     1021 ctaaggcgca aagctttgtt gaatctttat ataatgcgaa atcggtcacg attcaatatg
     1081 attcttggga gcactgcttt gcgcatgttt ggcgcaatcc cttctacaat acatggcatg
     1141 gttaaattct ctgctaataa gggaatagac acgctaactt ctgcggaagt agagccattt
     1201 ttgtgccatg aatacggtga ccgaaagtag
//
LOCUS       XM_071832674             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842548), mRNA.
ACCESSION   XM_071832674
VERSION     XM_071832674.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139842548"
                     /note="uncharacterized LOC139842548; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842548"
     CDS             1..837
                     /gene="LOC139842548"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688775.1"
                     /db_xref="GeneID:139842548"
                     /translation="MTYLGIPLGIKMNKSSAWLPIIEKFRKMLADWKIFHTNHDSLWA
                     RIIVNIYGTGRGLGSTNNLQFAGNTIWTNIVKVGQKIDNFGIAFSTSITKSISNESTT
                     KFWTYSWMGSDPLKDVFNRLFVLESDKMDLVQDRVIFTEETRRFNWQWCREPRGRAID
                     EVEAIENLINAVSLNPNAEDKISWNLDADGIFSTKSLASQIDGKKLQVGNNVIETVRN
                     KLIPQKVSIFVWRAKLQRLPVRFELDKRGIDINTLLYPICGDEVEKVDHVLIQCRKVV
                     EF"
     misc_feature    574..816
                     /gene="LOC139842548"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgacatacc ttggtatacc tttgggaatt aagatgaata aatctagtgc ttggttgccg
       61 attattgaaa agtttaggaa aatgctcgcg gattggaaga tattccacac aaaccacgac
      121 tccctttggg ctagaatcat tgtcaatatt tatgggacgg gtagggggtt gggttcgact
      181 aataatctac agttcgcagg aaatacaatt tggacaaata ttgtgaaagt tggccagaag
      241 atagataact tcggtatcgc tttttcaaca tcaatcacaa agagcattag caacgaaagc
      301 acaactaaat tctggacata ttcgtggatg ggcagtgatc ccctaaaaga cgttttcaac
      361 agattgttcg tacttgaatc ggataaaatg gatttggtcc aagatagggt gatatttaca
      421 gaagaaacgc gcagattcaa ttggcaatgg tgtagggaac caagagggag agctattgat
      481 gaagtcgaag caatagaaaa cctaatcaat gcggtctctt tgaatccgaa cgcagaagac
      541 aaaattagtt ggaaccttga tgctgatggc atattctcaa caaagagttt agcctctcaa
      601 atcgatggta aaaagctcca agtaggtaat aatgtcatag aaaccgtacg caacaaactt
      661 attcctcaaa aggtttcaat cttcgtttgg cgagcaaaac ttcaaaggtt accggtccga
      721 tttgaactag ataaacgagg tatcgacata aacaccttgt tatatccaat ttgtggcgat
      781 gaagttgaaa aggtcgatca tgtgttaata caatgtagaa aagtggtaga attttag
//
LOCUS       XM_071832675            1876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842550), mRNA.
ACCESSION   XM_071832675
VERSION     XM_071832675.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 52% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1876
                     /gene="LOC139842550"
                     /note="uncharacterized LOC139842550; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842550"
     CDS             14..1876
                     /gene="LOC139842550"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688776.1"
                     /db_xref="GeneID:139842550"
                     /translation="MDHQPPQPTIIPQDSFESSSPTCRQWDETLPPPKLRMMCSYGGH
                     IIPRPHDKSLCYMGGETRIVVADRHTSLSDLSSRLSTTLLHGRQFSLKYQLPSEDLDS
                     LVSVTTDEDLDNMIEEYDRLNASNPSTKPSRLRLFLFLSKPDTAASMGSLLDDAKSET
                     WFVDALNGAGLLPRGLSDSATIDNLLEHKDGAINQQEIDNINLNINHNIQNHNNNNTS
                     NNNVDYVELQEMQRRRLDVQLNLPDSPLVETNSSFGSSSSTPSMSNLPPIKVRVDQMN
                     QMAGLDEQLSQLNVNVNPIAAVNVGGNWAVTDEERSDHNHGVSSGGGMRKPPLPLQVA
                     QRNKFGNDAYNLPSPDSKHGGAYGLHSPDSVASDSSIASASKPTFTQDVNPSSIRDTL
                     TPNPSTTTQFYPATTINYQIPNHQIHDPTDTSQPQQLNHDQQQQFYQQRPQYIQQHHA
                     TNQPPQPISSYYPMYAPPQQLDHQQYPCYFLPISQNHPYGMQLQSNPSDATATTTPPL
                     YPPKTGIPLTNQENTPTNSLYTTTTPVVIQVPTNQFQQQQQQYVNVSQMPHQPRPSYH
                     EYAHPTHDQLYYSQHHSVAAPNLPSQYQTMTPASAMLLAQVSTAQQPAVETAKQ"
     misc_feature    125..430
                     /gene="LOC139842550"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; Region:
                     PB1_UP2; cd06410"
                     /db_xref="CDD:99731"
ORIGIN      
        1 caccattcct aaaatggacc accaaccacc acaacccacc ataatccccc aagactcctt
       61 cgaatcctcg tcccccacct gccgccaatg ggacgaaact ctcccaccac ctaaactccg
      121 aatgatgtgc agttacggtg gccacattat cccccgtcca cacgataaat ccctatgtta
      181 catgggcggt gaaacgcgta tcgttgtagc cgatcgccac acctcattat ccgatctttc
      241 ctctcgtcta tctactactc tactccacgg ccgccagttc agcctaaaat atcagttacc
      301 gagtgaagat ctcgattcgc tcgtctcagt aaccaccgat gaagacctcg ataatatgat
      361 cgaagaatac gatcgattaa acgcttctaa tccgtctact aaaccgtcta ggctacgttt
      421 atttttattt ttatcaaaac cggataccgc agcatccatg ggatccttac ttgatgatgc
      481 taaatccgaa acgtggttcg ttgacgcatt aaacggcgcc ggattgcttc ctcgaggctt
      541 atccgattcc gctactatcg ataacttact tgaacataaa gacggagcaa ttaatcaaca
      601 ggaaattgat aatattaacc taaacattaa tcataatatt caaaatcata acaataataa
      661 tacgagtaat aataatgttg attacgtgga gctgcaagag atgcaacgac gtcgtttaga
      721 tgttcaatta aacttacctg attcaccatt agtggaaaca aactcgtcgt tcggatctag
      781 ttcatcgact ccttcgatgt cgaatttgcc gccgattaaa gttagggttg atcagatgaa
      841 tcagatggcg ggacttgacg agcagttatc gcagttgaat gtgaatgtga atccgattgc
      901 tgcagttaat gtaggtggta attgggcggt tactgatgaa gagagatctg atcataatca
      961 tggagttagt agcggtggtg gaatgaggaa accgccgttg ccgctgcagg tagcgcaacg
     1021 gaataagttt gggaatgatg cttataattt gccgtcgccg gactcgaagc acggtggcgc
     1081 gtatggttta cattcgccgg attctgtagc cagtgatagt agcattgctt cagcatcaaa
     1141 accaacattc actcaagatg taaatccctc gtcaatcagg gacactttaa ctccaaatcc
     1201 atcaaccact acccaattct accccgcaac gaccatcaac taccaaatcc caaaccatca
     1261 aatccatgac ccaacagaca catcacaacc tcaacaactc aatcatgatc aacaacaaca
     1321 attctatcaa caaagaccac aatacatcca acaacaccat gcaacaaacc aacctccaca
     1381 accaatctca tcgtactacc caatgtacgc tccaccacaa caactggatc atcaacaata
     1441 cccatgttac tttctcccaa tatcacaaaa tcatccatac ggtatgcaat tacaatctaa
     1501 cccatcagat gctactgcaa ccaccacccc accactgtat ccacccaaaa ccggcattcc
     1561 actaaccaat caagagaata cgcccacaaa ttctttatac acaaccacaa ctccagtagt
     1621 tattcaagtt ccaaccaatc aattccaaca acaacaacaa caatatgtga atgtttctca
     1681 aatgcctcat caacctcgtc cttcttatca tgagtacgcc cacccaaccc atgatcaact
     1741 ttattattca caacatcact cggtggctgc acctaattta ccttcacaat atcaaaccat
     1801 gactcccgct tctgccatgt tgttagctca agtgtcaaca gctcagcaac cggccgtaga
     1861 aactgctaaa cagtag
//
LOCUS       XM_071832677            1086 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At3g07870-like
            (LOC139842552), mRNA.
ACCESSION   XM_071832677
VERSION     XM_071832677.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1086
                     /gene="LOC139842552"
                     /note="F-box protein At3g07870-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     Proteins"
                     /db_xref="GeneID:139842552"
     CDS             1..1086
                     /gene="LOC139842552"
                     /codon_start=1
                     /product="F-box protein At3g07870-like"
                     /protein_id="XP_071688778.1"
                     /db_xref="GeneID:139842552"
                     /translation="MKLIAEELWFQRDLIDLEERRFILRFKSVSKSWNALFQNPNFIS
                     KHFKNQSTIPDPSFLFTPTYSPSTSDGKVGFIFSDSSDKSIKIPIEIDFPILKPFSVC
                     GSCNGLICLSVLPIGAIIFLWNPATRVCKDLPISPIDRPPRAVPIKVVIGFGFDDVVK
                     DYKVLRIMYDRYSVDQVEIYSLSTNSWREIKTRVPFLISACSVFLNGKLHWNASGFQE
                     MNGKKLIATFDFREEAFNYIMPPKFDLSRRINGKIDSCSVVMMKESLAMIGSVRIGSR
                     KMFEVWVMKEYGAVSSWMKYRSFELKPKVGKWLGCGLKGEFMFEKDDNELVEKDDNQL
                     VVYDLDSHSQSVINLGNQEVAYCCPKD"
     misc_feature    <67..126
                     /gene="LOC139842552"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    304..909
                     /gene="LOC139842552"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atgaaattaa ttgctgaaga gctctggttt caacgggatc tgatagatct ggaagagagg
       61 cgattcattc tccgtttcaa atctgtttcc aaatcatgga acgccctttt tcaaaaccct
      121 aatttcatct ctaaacattt caaaaatcaa tccactattc cagatccatc ttttcttttt
      181 acacctacct actcgccctc cacatctgat ggtaaagttg gttttatctt ttctgattca
      241 tcagacaaat caattaaaat tccaatcgaa atcgactttc ccattttgaa accctttagt
      301 gtttgtggga gctgtaatgg gttgatttgt ttgagtgttt tgcctattgg tgcgattatt
      361 tttttatgga atcctgctac tagggtttgt aaagacttgc ctatttcgcc tattgatcgt
      421 cctcctcgag ctgttccaat taaggttgtg atagggtttg ggtttgatga tgttgtaaag
      481 gattacaagg tgttaaggat tatgtatgat aggtattccg tggatcaagt tgagatatac
      541 tcgttgagta cgaactcttg gagggagatt aagactcgag ttccattttt aatctcggca
      601 tgtagtgttt ttttgaatgg gaagttacat tggaatgctt ctggttttca ggagatgaat
      661 gggaagaagc tgattgccac attcgatttt cgcgaggagg cgtttaatta cataatgccc
      721 cctaagtttg atcttagtag gcgtataaat ggaaagatag atagttgttc ggttgttatg
      781 atgaaggaat cactagcaat gatcggttca gttaggattg ggtctaggaa gatgtttgag
      841 gtgtgggtaa tgaaagaata tggggcggtt tcatcgtgga tgaaatatcg gtcatttgaa
      901 cttaaaccta aagttggtaa atggttgggg tgtggattga aaggtgagtt tatgttcgag
      961 aaagatgata atgaactagt tgagaaagat gataatcaac tagttgtgta tgatttggat
     1021 tcacattcac aaagtgttat caatttgggg aatcaagagg ttgcttattg ttgcccgaag
     1081 gactaa
//
LOCUS       XM_071832678            1921 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent zinc
            metalloprotease FTSH 2, chloroplastic (LOC139842553), mRNA.
ACCESSION   XM_071832678
VERSION     XM_071832678.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1921
                     /gene="LOC139842553"
                     /note="ATP-dependent zinc metalloprotease FTSH 2,
                     chloroplastic; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 49 Proteins"
                     /db_xref="GeneID:139842553"
     CDS             1..1776
                     /gene="LOC139842553"
                     /codon_start=1
                     /product="ATP-dependent zinc metalloprotease FTSH 2,
                     chloroplastic"
                     /protein_id="XP_071688779.1"
                     /db_xref="GeneID:139842553"
                     /translation="MINTITKKAVEDLHIDGTIAIVEAVSPELGNRVQRVRVQLPGLS
                     QELLQKFREKNIDFAAHNAQEDSGSFLFNLIGNLAFPLTLIGGLFHLSRRSGGGMGGP
                     GGPGNPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAR
                     IPKGVILVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK
                     DNAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVVAATNR
                     ADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHAGNKKFDNDVSLEVIAMRTPGFS
                     GADLANLLNEAAILAGRRAKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEV
                     GHAICGTLTPGHDAVQKVTLVPRGQARRLTWFIPSDDPTLISKQQLFARIVGGLGGRA
                     AEEIIFGEPEVTTGAAGDLQQITGLAKQMVVTFGMSEIGPWSLMDGSGQSQDVIMRMM
                     ARNSMSEKLAEDIDTAIKKLSDSAYEIALMHIRNNREAMDKIVEVLIEKETMSGDEFR
                     AILSEFVEIPVENRVVPASPSPVSV"
     misc_feature    34..1737
                     /gene="LOC139842553"
                     /note="cell division protein; Validated; Region: ftsH;
                     CHL00176"
                     /db_xref="CDD:214386"
     polyA_site      1921
                     /gene="LOC139842553"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgataaaca caattacaaa aaaagcagta gaagatcttc acatcgatgg cacgatagcg
       61 attgttgagg cggtttctcc cgaattggga aaccgtgttc agagggttag ggtccaactc
      121 ccgggcctta gtcaagaact tttacaaaag tttagggaga aaaatattga ctttgcagca
      181 cataatgctc aagaggattc gggttccttt ttgttcaatt taattggaaa tcttgctttt
      241 ccgttgacct tgattggtgg tttgttccat ttgtcgagac ggtctggtgg tggaatgggt
      301 gggcccggtg ggcctgggaa cccacttgct tttggtcaat cgaaagcaaa gtttcaaatg
      361 gaaccgaaca ctggtgtcac gtttgatgac gttgcgggtg ttgacgaagc aaagcaggat
      421 tttatggaag ttgtggagtt tttaaagaaa cccgagaggt ttactgctgt tggtgctcga
      481 atcccgaaag gtgttattct tgtgggccca cctggaacgg gtaaaacact tcttgctaag
      541 gctattgctg gagaagcggg tgtcccgttt ttctcgattt cgggttcaga gtttgttgag
      601 atgtttgttg gtgttggtgc ctcgagagtt cgcgatcttt tcaaaaaggc gaaagataac
      661 gcaccgtgta ttgtgtttgt cgatgaaatt gatgcggttg gaaggcaacg tgggaccggt
      721 attggagggg ggaatgatga aagagaacag acacttaacc aacttttaac tgagatggac
      781 gggtttgaag gtaatacggg tattattgtt gttgcagcta ccaaccgtgc agatattctc
      841 gactctgcat tattgagacc tggacgattc gacagacagg tatcggttga tgttccagat
      901 gttcgaggac gaacagagat cttgaaggtt catgctggga acaagaagtt tgacaacgat
      961 gtttctcttg aggtaattgc aatgagaacg cctggattta gtggagctga tctggcaaat
     1021 cttttaaacg aagcagctat attagctggt cgacgtgcaa aaaccgcaat atcatccaaa
     1081 gaaatcgacg actccattga tagaatcgtt gccggaatgg aaggaactgt tatgacagat
     1141 gggaaaagca aaagtcttgt agcctatcat gaagttggcc acgccatttg tggaacacta
     1201 acaccaggcc atgatgcggt ccaaaaggtg accctggtcc cacgtggtca agcaagacgg
     1261 ttgacctggt ttataccatc tgatgacccc acattgatct ctaaacaaca actgtttgca
     1321 cgaatcgttg gtggacttgg tggaagagct gctgaagaaa tcatatttgg tgagccagag
     1381 gtgactactg gtgcagccgg tgatctgcaa cagatcaccg gtttagccaa acagatggtt
     1441 gtaacatttg gcatgtcgga aattggtcca tggtcactta tggatggatc tggtcaaagt
     1501 caagatgtta taatgagaat gatggctaga aactcaatgt ccgaaaagct agctgaagat
     1561 attgatacag caattaaaaa gctttcagac agtgcatacg aaattgcatt gatgcatatc
     1621 agaaacaatc gcgaagctat ggacaaaata gtggaggttc ttattgagaa agaaacaatg
     1681 agtggagatg agtttcgggc aatcctttct gaattcgttg aaattccagt tgaaaatcgg
     1741 gttgttcctg cttctccgag cccagtaagt gtatgaatga taggatactt taattaaatt
     1801 acaacactgt gatatgtaat ataattcttg gttacagttt ttgattgttt atttggtagt
     1861 aaattgtaat gtttaactac caagtggttc atacatataa aagatagctg ctttttccta
     1921 a
//
LOCUS       XM_071832679            1602 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842554), mRNA.
ACCESSION   XM_071832679
VERSION     XM_071832679.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1602
                     /gene="LOC139842554"
                     /note="uncharacterized LOC139842554; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139842554"
     CDS             1..1413
                     /gene="LOC139842554"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688780.1"
                     /db_xref="GeneID:139842554"
                     /translation="MAVAFSLVSPPSLSSSNFILRASSSSSSSNLSPSRFYLICSKNN
                     NFNYIHLPSAKNINSSTRSFARLSSKNDNNNNIHNSTIDDDDEEDDDVDAVLDNDTAD
                     DELFTSGLPERWDVLGLGQAMVDFSGIVNDEFLMRLGLEKGTRKVVNHEERGRVLQAM
                     DGCTYKAAAGGSLSNTLVALARLGAHPMGGPALNVAMAGSIGSDPLGGFYRTKLRRAN
                     VSFLSAPVMDGTTGTVIVLTTSDAQRTMLAYQGTSSYINYDSSMESIISKTNILVVEG
                     YLFEFPDTIKTIKKICQVARDSGALVAVTASDVTCIERHYDDFWEIMENYADIVFANS
                     DEARAFCNFSPEESPISSTQYLSHFVPLVSVTDGPRGSYIGVKGEALYIPPSPCMPVD
                     TCGAGDAYASGILYGLLRGASDLKGMGSLAARVAATVVAQQGTRLRVQDAARLAESFV
                     FNVESPSLQADVGSDQISSS"
     misc_feature    289..1407
                     /gene="LOC139842554"
                     /note="pfkB-type carbohydrate kinase family protein;
                     Region: PLN02813"
                     /db_xref="CDD:215434"
     polyA_site      1602
                     /gene="LOC139842554"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggcggtag cgttctctct cgtatctcct ccttcacttt catcttctaa tttcattctt
       61 agggcttctt cttcttcttc ttccagcaat ttatcccctt ctcgttttta tcttatttgt
      121 tctaaaaata acaattttaa ttacatccac ttaccttcag ccaaaaacat taacagcagc
      181 acacgttcgt ttgctcgatt atcttcaaaa aatgataata ataataatat tcacaactcc
      241 acaattgatg acgacgatga agaagatgat gacgtggacg cagttttgga taatgatact
      301 gctgatgacg aactctttac ttctggatta cctgaacgtt gggatgtttt aggtcttggc
      361 caagcaatgg tagatttttc agggatagtg aacgatgagt ttttaatgag attgggttta
      421 gaaaagggta caagaaaggt tgtgaatcat gaggagaggg gtagggtttt gcaagcaatg
      481 gatggatgca cctacaaggc tgctgctggt ggctctttat caaataccct agtcgcgttg
      541 gctaggctcg gtgctcaccc gatgggaggt cctgcgttga acgtagctat ggctggtagc
      601 atcggtagtg atccattagg tggcttttac agaactaaac tcagacgggc caatgtgagt
      661 tttctttctg caccggtgat ggatgggaca acagggacag ttatagtttt gacaacctct
      721 gatgctcaac gtacaatgct tgcttatcag ggcacatctt catacattaa ttatgattct
      781 agtatggaga gcataatttc caagacaaat attcttgttg ttgaagggta tttgtttgaa
      841 tttcccgaca cgatcaagac aatcaaaaaa atttgtcaag ttgctcgcga tagtggtgct
      901 ttggttgctg ttacagcctc ggatgtcaca tgcatagaga ggcattatga cgatttctgg
      961 gaaataatgg aaaactatgc cgacattgtg tttgcaaaca gtgacgaggc ccgagccttt
     1021 tgtaattttt ctccagaaga aagcccgata tcttccacgc aatatctaag tcattttgtt
     1081 ccattagttt ctgttacaga cgggcccaga ggatcgtaca ttggtgtaaa gggagaggct
     1141 ttatatattc ctccttcacc ctgcatgcca gttgacactt gtggggccgg ggacgcatat
     1201 gcttcgggga tattgtacgg gttattaagg ggtgcatcag atttgaaggg aatgggctcg
     1261 ttggcagcac gtgttgcagc cacagtggtt gcgcagcaag gtacacgact tagggttcaa
     1321 gatgctgcta ggttggctga gtcgtttgtg tttaatgtcg agagcccgtc acttcaggca
     1381 gatgttggtt cggaccagat ttctagctca tagtgcattc ttgatagatt gtatgtaggc
     1441 ctttttcatc tttttttttt tttttttttt ttttgtttta attaattgac atgttgaaat
     1501 gtaatcagat ttaaaaaaaa attatgtatg ctcaaggatg ttgaatgtag ataacataaa
     1561 aggaagaagg atgagccaga agcagataaa tttttttatt ca
//
LOCUS       XM_071832680            1278 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842557), mRNA.
ACCESSION   XM_071832680
VERSION     XM_071832680.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1278
                     /gene="LOC139842557"
                     /note="uncharacterized LOC139842557; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842557"
     CDS             1..1278
                     /gene="LOC139842557"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688781.1"
                     /db_xref="GeneID:139842557"
                     /translation="MPSAMSPSISTNQKLQILLGLAKPFLREELEKIDPKLPSLISIL
                     CSTGAGECFHRTGSFLDHLRHVYRIIKLWNAPDSIALCALFHSVYSNSYSNIVLFNPE
                     TERDKVRSLIGEEAERLAHLFCVVHRQSLVHKDIICKFTESELVEFLEASEVSLANAN
                     EEGVFDSEEKWRKKVNLLIPKNGVIGKHYVTGEEILVSRRMIGVFLFMTLADISEQYF
                     GFQDVLYENWNGRLELTESRYETLYPGNGKPGLWMNAASRMGAVYTLLVREEEISMKE
                     GKKSGGGVERDEDIELVVPPVFEKCSKILDASDQIKARDLYWEVVYDDGCDEGKKEKD
                     EEKLVKCIELNPFVGEPHVLLGQVYLGKGRFEEGEKEIEKGLSLLLEWGCSWDKRISW
                     EGWVAWSRVMLNKAKDKSWPTTAWGIINLGLVK"
ORIGIN      
        1 atgccttcgg ccatgtcccc ttcaatttca actaaccaaa aacttcaaat ccttttggga
       61 ttggctaagc ctttcctccg tgaagaatta gaaaaaatag atccaaagct tccgtcctta
      121 atctccattt tatgctctac cggagcaggt gaatgtttcc atcgtacagg aagcttccta
      181 gaccacctgc gccacgtgta ccgcatcatt aagctgtgga acgcccctga ttcaatcgca
      241 ctttgcgccc tgtttcactc tgtttactca aactcttaca gtaacattgt actattcaac
      301 cccgaaaccg aaagggacaa agttcgtagt cttatcggtg aagaagccga aagattagct
      361 catttgtttt gtgttgttca tcgccaatct cttgtccata aagatattat ttgtaagttt
      421 actgagtcag agcttgtaga gtttctagaa gcttctgagg tttcgttagc gaatgctaac
      481 gaagaaggtg tgtttgatag tgaggaaaaa tggcgtaaaa aggttaactt acttattccg
      541 aaaaatgggg tgattggaaa acattatgta acaggtgaag agattttggt ttcaagaaga
      601 atgattggtg tgtttctttt catgacatta gccgatatta gtgaacaata tttcggtttt
      661 caggatgttt tatatgaaaa ctggaacggt cgacttgaat taaccgaaag tcggtatgaa
      721 acattgtatc ctggaaatgg gaagccaggt ttatggatga atgcagcttc aagaatgggt
      781 gcagtttaca cgcttttggt tcgagaagaa gagatttcaa tgaaagaagg taaaaagagt
      841 ggtggtgggg ttgaacgaga cgaagatatc gagctagtgg tcccaccggt tttcgaaaag
      901 tgtagcaaga ttcttgatgc aagtgatcag attaaggcta gggacttata ctgggaggtg
      961 gtttatgatg atgggtgtga tgagggtaag aaggaaaagg atgaggagaa gttggttaag
     1021 tgtattgagt tgaacccatt tgtgggtgag ccgcatgtgt tgttgggtca ggtttatttg
     1081 ggtaaaggga ggtttgaaga gggtgaaaaa gagattgaaa agggtttgag tttgttgttg
     1141 gaatgggggt gttcttggga caaaagaata tcatgggaag ggtgggtggc ttggagtagg
     1201 gtgatgttga ataaggctaa agacaagtct tggccaacaa ctgcatgggg tattatcaat
     1261 ttggggcttg ttaagtag
//
LOCUS       XM_071832681            1218 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842558), mRNA.
ACCESSION   XM_071832681
VERSION     XM_071832681.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1218
                     /gene="LOC139842558"
                     /note="uncharacterized LOC139842558; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842558"
     CDS             1..1218
                     /gene="LOC139842558"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688782.1"
                     /db_xref="GeneID:139842558"
                     /translation="MSPSNSTNQRLQILLESAKPFLREEFEKIDPKLPSLIAVLCSTG
                     AGECFHRPGSFLDHLRHVYRIIKLWNSPDSIALCALFHSVYSNSYSNIVLFDPETERD
                     KVRSLIGEEAEILAHLFCVVDRQSLVRTNIIRKFTESELVEFLEASEVSLRKKVNLLI
                     PKNGVIGKHYVTGEEILVSRRMIGVLLFMTLADICEQYFSFQDVLYVNWNGRLEQSGS
                     RYETLYPGNGKPGLWMNSASRMGAVYTLLVREEAISMKESRTGTAVERNEDIELVIPP
                     IFEKCSKILDATDQIKARDLYWEVVYDDGCDEGKKEKDEEKLVKCIELNPFVGEPHVL
                     LGQVYLGKGKFEEGEKEIEKGLSLLLEWGCSWDKRITWEGWVAWSRVMLNKAKDKSWP
                     TTAWGIINLGLVK"
ORIGIN      
        1 atgtctcctt caaactcaac taaccaaaga ctccaaatcc ttttggaatc tgctaagcca
       61 ttcctccgtg aagaattcga aaaaatagac ccaaaacttc cgtccctaat cgccgtttta
      121 tgctctacgg gtgcaggaga atgtttccat cgtccaggaa gcttcctaga ccacctccgc
      181 cacgtgtacc gcatcattaa gctgtggaac tcccctgatt caattgcact ttgcgccctg
      241 tttcactctg tttactcaaa ctcttacagt aacattgtcc tattcgaccc tgaaaccgaa
      301 agggataaag ttcgcagtct tattggagaa gaagccgaaa tattggctca tttgttttgt
      361 gttgttgatc gccagtctct tgtccgtaca aatatcatac gtaaatttac tgaatcggag
      421 cttgtagagt ttctagaagc ttctgaggtt tcgttgcgta aaaaggttaa cttactgatt
      481 ccgaaaaatg gggtgattgg aaaacattat gtaacaggtg aagagattct ggtttcaaga
      541 agaatgatcg gtgtgttact ttttatgaca ttagccgata tatgtgaaca atatttcagt
      601 tttcaggatg ttttatatgt aaactggaac ggtcgacttg aacaatcagg gagtaggtat
      661 gaaactttgt atcctggaaa tggaaaacca ggtttatgga tgaattcagc ttcaagaatg
      721 ggtgcagttt acacgctttt ggttcgagaa gaagcgattt ccatgaaaga aagtaggact
      781 ggcactgcag ttgaacgcaa cgaagatatc gaactagtga tcccacctat tttcgaaaag
      841 tgtagcaaga ttcttgacgc aactgatcag attaaggcca gggacttata ctgggaggtg
      901 gtttatgatg atgggtgtga tgagggtaag aaggaaaagg atgaggagaa gttggtcaag
      961 tgtattgagt tgaacccatt tgtgggtgag ccacatgtgt tgttgggtca ggtttatttg
     1021 ggtaaaggga agtttgaaga gggtgaaaaa gagattgaaa agggtttgag tctgttgttg
     1081 gaatgggggt gttcatggga caaaaggata acatgggaag ggtgggtagc ttggagtagg
     1141 gtaatgttga ataaggctaa agataaatct tggccaacta ctgcttgggg tattatcaat
     1201 ttggggcttg ttaagtag
//
LOCUS       XM_071832683             876 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides histidine--tRNA ligase,
            cytoplasmic-like (LOC139842559), mRNA.
ACCESSION   XM_071832683
VERSION     XM_071832683.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..876
                     /gene="LOC139842559"
                     /note="histidine--tRNA ligase, cytoplasmic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 40 Proteins"
                     /db_xref="GeneID:139842559"
     CDS             1..876
                     /gene="LOC139842559"
                     /codon_start=1
                     /product="histidine--tRNA ligase, cytoplasmic-like"
                     /protein_id="XP_071688784.1"
                     /db_xref="GeneID:139842559"
                     /translation="MKIKEDNRDEEDERSCWQDGKNLCSHWYDLIVPFARYVSMNGLD
                     SIQNGFKSFRAYQMATVFRDCRESYQCQFDIAGDESVAVAEYEVVYIMSELLDDLNIG
                     GCEKVVEWSVGYLWRAVSLSQVSNVCSTIDKLDKLSLEQIKKELIDVKGIDVKTVSNI
                     CSFLRTFRGKPREFLSKLKEEHNELLINESSKQAWNEFDKLFDMLEDTGRIKNFVLDL
                     SLSLSRCPDYYTGVIYEAVLKGVTTQQQQVGLIAYGGRYDNLIGMFGSEPVPAIGVTL
                     EIEHVQSWNNTIKMS"
     misc_feature    <58..843
                     /gene="LOC139842559"
                     /note="Histidyl-tRNA synthetase; Region: PLN02972"
                     /db_xref="CDD:215525"
ORIGIN      
        1 atgaagatca aagaagataa tcgtgatgaa gaagatgaaa gaagctgctg gcaggatggt
       61 aaaaatcttt gttcacattg gtatgatcta attgtcccgt ttgctagata tgttagtatg
      121 aatggtttag actcgattca gaatggtttc aagtcattca gagcgtacca gatggcaacc
      181 gtgtttaggg attgccgtga atcatatcaa tgtcagtttg acattgctgg tgatgaatca
      241 gtagcagtag cagagtacga ggtagtctat attatgtctg aactgctaga cgatctaaat
      301 atcggtggtt gtgagaaagt tgttgaatgg agtgttggat atttgtggcg tgccgtctca
      361 ctctcacaag tatcgaacgt ttgttcaact attgacaaat tagacaagct gtcgttggag
      421 cagattaaaa aggaactgat cgatgtgaag ggcatagatg ttaagacagt gagcaatatt
      481 tgttcgtttt tgaggacgtt tagaggcaag cctcgcgaat ttttatcaaa actgaaagaa
      541 gaacataatg agttattgat aaacgaatct tccaaacaag catggaatga atttgacaag
      601 ttattcgata tgttagagga tacgggacgt atcaaaaact tcgttcttga tttaagtttg
      661 agtttgtcaa gatgccctga ctattacacg ggtgtcatat atgaagctgt gttaaagggg
      721 gtgacaacac agcaacagca ggttggtttg attgcttatg gaggacgtta cgataatctt
      781 ataggcatgt ttggttcaga acctgttcct gcaattggtg tcactttgga aatagagcat
      841 gtgcaatcat ggaacaatac cataaaaatg agctga
//
LOCUS       XM_071832684            1782 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter G family
            member 10-like (LOC139842560), mRNA.
ACCESSION   XM_071832684
VERSION     XM_071832684.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1782
                     /gene="LOC139842560"
                     /note="ABC transporter G family member 10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:139842560"
     CDS             1..1782
                     /gene="LOC139842560"
                     /codon_start=1
                     /product="ABC transporter G family member 10-like"
                     /protein_id="XP_071688785.1"
                     /db_xref="GeneID:139842560"
                     /translation="MGSMDLVKQKRQYTIKTKSVSYGVSPPTFGWINLHKKVNPTSKK
                     QIIKDVSCEVKPREITAVAGPSGAGKTTLLEILAGVIPPCRVSGQLLVNGRPMNAGFI
                     RRVSGYVTQEDLLFPLLTVEETLFYSARLRLRDGVENVKTRVSELLVELGLSHVAGER
                     IGGGSHRGISGGEKRRVSIGVDLVHDPAVLLMDEPTSGLDSSAALQLMSMLKSMAKDQ
                     GKTIVLTIHQPGFRILELFDQVVLLVDGTVVHHGSLDHLDHRLKSAGHFIPRHVNVLE
                     FSIDVIETLIPDVKLESGFIEAKKQTTHVNDDCRLMYANSSFDEVMILSQRFCYNIFR
                     TKQLFMWKMVQALLVGILLGTIFNDVNRFHMQTQIGFFAFQLTFLLYSSSEALPIFLQ
                     ERRILMREISIGAYRISSYALANTLVFIPFLLIVALLYSIPTYWLVGLRKDIDGFLYF
                     SLVVWLVLLTSNSFVAFFSALVPNFMMGICLIAGIMGSFFLFSGYFIASNDIPIYWFF
                     MHYLSLFRYPFECFLLNEFGGSKGRWRCLERFEDGCLIYGEEFLKKQNIKEIQKWNNL
                     GMMLVFIFAYRFLSLLVLCYRSYRSRN"
     misc_feature    130..1776
                     /gene="LOC139842560"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; Region: 3a01204; TIGR00955"
                     /db_xref="CDD:273361"
ORIGIN      
        1 atggggtcta tggatcttgt taaacaaaaa agacaataca caattaaaac caagagtgtt
       61 tcttatggtg tatcccctcc tacttttggt tggattaatt tgcacaaaaa agtgaatccc
      121 acatcaaaaa agcaaattat aaaggatgtt agttgtgaag ttaagccaag agagatcaca
      181 gcagttgctg gcccaagtgg tgccggaaaa acgacattac tcgagattct tgcaggcgtt
      241 atcccgccct gcagagtctc gggtcaactg ttggtcaatg gccgcccgat gaatgccggt
      301 tttatcagga gagtgtctgg ttatgtcaca caagaagatt tactttttcc tcttcttacg
      361 gttgaggaaa cgctctttta tagcgcacgt ttaaggcttc gcgatggggt tgaaaacgtg
      421 aagaccagag tgagcgagtt gttggtggag ctcgggttga gtcatgttgc cggagaaaga
      481 attggtggtg ggtcccaccg agggatttcg ggtggggaga aacgaagggt gtcgattggg
      541 gttgatttgg tccatgaccc tgcggtttta ctcatggatg aaccgacttc agggctagac
      601 tcatctgcag ctttgcagtt gatgtcgatg ctgaaatcga tggctaaaga tcaaggtaag
      661 acgattgtat taaccataca ccaaccaggg tttcggatac ttgaactatt tgatcaagtt
      721 gtgttgttag tagatggaac cgtggttcac catggttcac ttgatcatct tgaccaccga
      781 cttaaatcag ctggtcattt catccctcgt catgttaacg tgctcgagtt ttcaatcgat
      841 gtgattgaaa cgttgatccc agatgtgaaa ctagagtctg gttttataga agctaagaag
      901 caaacgactc acgtaaacga tgattgtcgt ttgatgtatg caaattcgtc attcgacgag
      961 gtgatgatac tgagccaaag attttgctac aacattttca ggaccaaaca gcttttcatg
     1021 tggaaaatgg ttcaagcctt gctagttggg attctgttag ggacgatatt caacgacgtt
     1081 aatcggtttc atatgcagac tcaaatcggg ttttttgcgt ttcagttaac gtttttactc
     1141 tattcatcat cagaagcttt gcctattttc ttgcaagaac gacgaattct aatgagagag
     1201 atctcgatag gagcctatcg gatttcatct tacgctttag ccaacactct cgttttcatc
     1261 ccgtttcttt tgatagtggc tcttttatac tcgatcccga cctattggct agtcggatta
     1321 aggaaagata tagacgggtt tctttacttt tcacttgtcg tttggttggt tttattgacg
     1381 tcgaattcat tcgtggcttt ttttagtgct cttgtaccga acttcatgat ggggatctgt
     1441 ttgattgcgg gaataatggg gtcgtttttt cttttttcgg ggtactttat tgcgagcaac
     1501 gacataccta tatactggtt tttcatgcac tatttgagtc tttttaggta cccgttcgag
     1561 tgttttttgt taaacgagtt tggaggatca aagggaagat ggaggtgtct tgaaagattt
     1621 gaagatggat gcttgatata tggagaagaa ttcttgaaga agcaaaacat aaaggagata
     1681 caaaaatgga ataatttggg gatgatgttg gtgttcatct ttgcgtatag gtttctttcg
     1741 ttactggttt tatgctatcg atcttatagg agcagaaact aa
//
LOCUS       XM_071832685            1746 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter G family
            member 10-like (LOC139842561), mRNA.
ACCESSION   XM_071832685
VERSION     XM_071832685.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1746
                     /gene="LOC139842561"
                     /note="ABC transporter G family member 10-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842561"
     CDS             1..1746
                     /gene="LOC139842561"
                     /codon_start=1
                     /product="ABC transporter G family member 10-like"
                     /protein_id="XP_071688786.1"
                     /db_xref="GeneID:139842561"
                     /translation="MAETYEHGHPKTQYTIRTKSVSYRVSPPYFNFQFICQNRVNPTL
                     KKQILKDVNCQAKPGEITAVAGPSGSGKTTLLEILAGVIRPHRLSGQVVVNGRPMNPN
                     VFRRVSGYVTQDDILFPLLTVEETLLFSARFRLRDGLENAKNRVSELLIELGLTHVAQ
                     ERIGAGTGSHRGVSGGEKRRVSIGVELVHDPAVLLMDEPTSGLDSASAFHLMSMLKSM
                     AKDHGKTIVLTIHQPGFRILQVFDQVVLLVHGTVVHHGSLNLLDYRLKLAGHVIPSQV
                     NVLEFSIDVVESLFKDAELEAGFGLGLITCRPNEPDHINEGDHDQLLYANSPLNEVLI
                     LSQRFCHNLFRSKDIFLAKMILSMLFGILLGTTFKNVHKFEMQTQIGFFAYNLSFLIY
                     SSSEALTIFLQERRILMKETSIGAYRISSYILANTLVFIPFLLIVALLYSIPILMSNS
                     FVLFTSSFVSNFMMGIATVDGLIGLFFLFSGYFISKKDIPKYWIFMHYLSLVKYPFEA
                     FLLNEYGGSEKGKLRCLERFEGGCLVDGEDFLKRQKIKEIQKWHNLGLMIVFIFGYRF
                     LSYLVLSYRSYKTRN"
     misc_feature    40..1740
                     /gene="LOC139842561"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; Region: 3a01204; TIGR00955"
                     /db_xref="CDD:273361"
ORIGIN      
        1 atggcggaaa catatgaaca cggtcatcca aaaactcaat acacaattag aaccaagagt
       61 gtttcatatc gtgtctcacc accttacttc aattttcaat tcatttgcca aaacagggtg
      121 aaccccactc ttaaaaaaca aattctaaaa gatgttaatt gccaagctaa accaggagag
      181 attacagcag ttgctggtcc aagtggttcc ggaaaaacaa cgttactcga gatccttgca
      241 ggcgttatcc gaccacacag actctccggt caggtggtcg ttaacggtcg tcctatgaat
      301 ccaaatgttt tcagaagagt gtctggttat gtcacccaag atgatatatt attcccactt
      361 cttactgttg aagaaaccct tctttttagc gctcgtttta ggctccgcga tgggcttgaa
      421 aacgctaaaa acagagtcag tgagttactt atagaactgg ggttaaccca tgtggctcaa
      481 gaaagaattg gcgctgggac tgggtcccac cgtggggttt caggtggtga aaaaagaagg
      541 gtgtcaattg gtgtagagct ggtccatgat cctgcggttc tacttatgga cgaaccgact
      601 tcaggactgg actcagcttc agcttttcat ttgatgtcaa tgcttaaatc aatggctaaa
      661 gatcatggta agacaattgt gttaaccata caccaacccg ggtttagaat tcttcaagtt
      721 tttgatcaag ttgtgttgtt ggtacatgga accgtggttc accatggctc acttaatctt
      781 cttgactacc ggctcaaact tgcgggtcat gttatcccta gtcaggtcaa cgtgctcgag
      841 ttttcaatcg atgtggttga atcgctattc aaagatgcgg aattagaggc gggttttggc
      901 cttggtctta ttacttgtag accaaacgaa cctgatcaca taaacgaagg tgatcatgat
      961 caattgttgt atgcaaattc gccattaaac gaagtattga tactaagcca aagattttgc
     1021 cacaaccttt tcagatcgaa agatattttc ttagcgaaaa tgattctatc gatgttgttt
     1081 ggaattttac tagggacaac tttcaagaac gttcacaagt ttgaaatgca aactcaaatt
     1141 ggcttctttg cgtacaattt atcatttttg atctactcat cgtccgaagc gctaacaatt
     1201 tttctccaag aacggagaat tttaatgaaa gagacatcca ttggcgcgta tcgaatatca
     1261 tcctacattt tagccaacac tctagtgttc atcccatttc ttttaatagt ggctctttta
     1321 tactcaatcc caatattgat gtcgaattcg ttcgtgcttt tcacaagttc atttgtgtcc
     1381 aacttcatga tgggtatcgc aacggttgat ggactaattg ggttgttttt tctcttctcc
     1441 ggatacttta tatcaaaaaa agacatacca aaatattgga tttttatgca ctatttaagc
     1501 cttgttaagt atccatttga ggcttttttg ttaaacgaat atgggggatc ggagaaggga
     1561 aaattgaggt gtttggaacg atttgaaggt gggtgtttgg ttgatggtga agatttcttg
     1621 aagaggcaga aaattaagga gatacaaaaa tggcataatt tgggattgat gatagtgttc
     1681 atttttgggt atagatttct ttcgtatttg gtgctatcct acagatcgta caagacccga
     1741 aactaa
//
LOCUS       XM_071832686            1143 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842562), mRNA.
ACCESSION   XM_071832686
VERSION     XM_071832686.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1143
                     /gene="LOC139842562"
                     /note="uncharacterized LOC139842562; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842562"
     CDS             1..1143
                     /gene="LOC139842562"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688787.1"
                     /db_xref="GeneID:139842562"
                     /translation="MFRDLIEYKARKFQVSIKCFRSDNGTEFVNNQMNNFLQRNGIIY
                     QTSCAYTPQQNGIAEKKHRHLLNVARFLMFQGEFLSIFEKGYKLYNLETKSFIVSRDV
                     KFYENIFPFKFDSAYKISFSENDLNHLNFFDSAYFQNETSNKKDFKNPNDEGRDTIIC
                     DGKSTTLDSSFKNTSKDSSSVLPVTNDTGNSSDLEDVLRTSSSDGTTATQIDDHTIEP
                     SVQQCESNDQSKSEGTSTDVLDFSIRSSRKTVLPSKYKDYYLGCSNNKCKYEIQKFVN
                     YSCLSSENFCFASNLNKTHEPNSYWEVAQDPNWVNAMNEEMEALNRNGTSILTELPKD
                     RKPIGCKWVYRIKYKSTGVIDRYKARLVAKGFNQREGLDLIKLFHM"
     misc_feature    <31..201
                     /gene="LOC139842562"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
     misc_feature    967..>1134
                     /gene="LOC139842562"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
ORIGIN      
        1 atgtttaggg accttataga gtacaaagca aggaagtttc aagtttctat taaatgtttt
       61 agaagtgata atggcactga gtttgttaat aatcaaatga acaatttttt acaaagaaat
      121 ggtataattt accaaacatc ttgtgcctat actcctcagc aaaatggaat tgctgagaag
      181 aaacataggc atcttttgaa tgtggctaga ttccttatgt ttcaggggga attcctctct
      241 atctttgaaa aaggttataa gctttataat ctggaaacta aatcttttat tgtttccaga
      301 gatgttaaat tctatgaaaa catttttcct tttaagtttg attctgctta caaaatttct
      361 ttttctgaaa atgatttaaa tcatttaaac ttttttgatt ctgcttattt tcaaaatgag
      421 acttctaata aaaaggattt taaaaatccc aatgatgaag ggagagatac tataatctgt
      481 gatggcaaaa gtacaacatt ggattcaagt tttaaaaata catcaaagga cagttcatct
      541 gtgttacctg tcactaatga tactggtaac agttctgatc ttgaagatgt tttaagaact
      601 tcatccagtg atggtacaac tgcaacacag attgatgatc acacaattga acctagtgtt
      661 caacagtgtg aatcaaatga tcaatctaaa tctgagggta cttctacaga tgttctagat
      721 ttttctataa gatctagtag aaaaactgtg ttaccttcta agtataaaga ctattattta
      781 gggtgttcta ataataaatg caagtatgaa atacaaaagt tcgttaatta ttcttgtctt
      841 agttctgaaa acttttgttt tgcttctaat ttgaataaaa cacatgaacc aaactcatat
      901 tgggaggttg cacaagaccc taattgggtt aatgccatga atgaggaaat ggaggcatta
      961 aatagaaatg gcacatcgat tttaactgaa ttacctaaag atagaaaacc tataggatgt
     1021 aagtgggttt acagaataaa atataagtct acaggcgtta ttgatagata caaagcaaga
     1081 cttgttgcta aagggtttaa tcaaagagaa gggcttgatt tgattaaact ttttcacatg
     1141 tag
//
LOCUS       XM_071832687            1545 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842564), mRNA.
ACCESSION   XM_071832687
VERSION     XM_071832687.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1545
                     /gene="LOC139842564"
                     /note="uncharacterized LOC139842564; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842564"
     CDS             1..1545
                     /gene="LOC139842564"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688788.1"
                     /db_xref="GeneID:139842564"
                     /translation="MASQQQLRRENKTDEKEMHVEKDKVPKMTTHYESLTVKETGDQP
                     PAVVHHVIGTMHGASGEIHGQSQTQNKDYKMQTKDEYKGPSLEEISKYRGTAQQNSMD
                     AIKAAEEKYRMSKETGQREQTGQQQEQKGTTQTVMEKGRQIGQKVTQTAAENALRASD
                     YTVVKGQQVKQGLSSAAQSAAEKAASAKDYTVEKSQQTGQQAKEGLTSAAQTAAEKAA
                     RAKDCTIEKGQQTGQQAKEGLTSAAQTAAEKAATVKDFTLEKSVAAKDVVVDKTTGLA
                     ETAVDVSKKSASYIGEKAVAAKDVALETGKTTAGYVGKVASVVKDKAVVAGWSAAEFA
                     SEKAVGVTETMANVGSNVAGFAGDKVVATKDVLADVGKKTKDVVVSTEESVKEYAARK
                     KAEKQRELEAKNSKDKDELGMERDEINVYNQWGGEEYEGGEFEHQSGGMMVEGGEFEF
                     QSGGGDGGYEDQVMSGGGGAGSVMRVIGETLVEIGQNTKDMLVGQSGHGDEKNRVGET
                     EKQRDD"
ORIGIN      
        1 atggcttcac aacagcagct gagaagagag aacaaaactg atgaaaaaga gatgcatgtg
       61 gagaaagata aagtgcccaa aatgactact cattatgagt cactcaccgt taaagaaacc
      121 ggtgatcaac caccggcggt ggtccaccat gtgatcggaa ccatgcatgg tgcatccggt
      181 gaaatacatg gtcaaagtca aacacaaaat aaagattaca agatgcaaac aaaagatgaa
      241 tacaaaggcc cttctcttga agagatctca aagtacagag gcactgctca acagaactca
      301 atggacgcca ttaaagctgc ggaagaaaag taccgaatgt caaaagaaac cggtcaacgt
      361 gaacaaaccg gtcagcagca agaacaaaag ggtacaacac aaacggtaat ggaaaaaggc
      421 agacaaattg gtcaaaaggt aacccaaaca gctgctgaga atgcgttacg agcgtctgat
      481 tacacggttg taaaaggtca acaagtcaaa cagggtctgt cttccgcagc ccagtcagct
      541 gctgaaaaag cagctagcgc gaaggattac acagttgaaa aaagtcaaca aaccggtcaa
      601 caagctaaag agggtcttac gtcagcagcc caaacagcag cggaaaaagc ggcaagagcg
      661 aaagactgta ctatcgagaa aggtcaacaa accggtcagc aagctaagga gggtcttacg
      721 tcagcagccc aaacagcagc ggaaaaagcg gcaacagtga aagacttcac attagaaaaa
      781 agtgttgcag ctaaggatgt ggtggtggat aaaacgacag gattagcaga aacagcggtg
      841 gacgtgagta aaaagagtgc gagttatatc ggagaaaagg cggtggccgc gaaagacgtg
      901 gcgctagaaa cggggaaaac tacagctgga tatgttggaa aggttgcgag tgttgtgaaa
      961 gataaggcgg ttgtagctgg atggagtgcg gctgagtttg ctagtgaaaa agctgtgggt
     1021 gtgactgaaa ccatggcgaa tgtaggttcg aatgttgcgg ggtttgcggg tgataaggtt
     1081 gttgcgacta aggatgtttt ggcggatgtt gggaagaaaa cgaaggatgt tgttgtgtcg
     1141 actgaagaga gtgttaagga gtatgctgca aggaagaaag ctgaaaaaca acgagaattg
     1201 gaagccaaga attctaagga taaagatgaa ttagggatgg agagggatga gatcaatgtg
     1261 tacaatcaat ggggtggtga agaatatgaa ggtggtgagt ttgagcatca aagtggtggt
     1321 atgatggtag agggtggtga gtttgagttt caaagtggtg gcggtgatgg tggttatgag
     1381 gatcaagtga tgagtggtgg gggtggtgct ggaagtgtaa tgcgggtgat aggggagaca
     1441 ctggtagaaa tagggcaaaa cacaaaggac atgttggttg ggcaaagtgg tcatggggat
     1501 gaaaaaaaca gagttggaga aacagaaaag caaagggatg attag
//
LOCUS       XM_071832688            3600 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842565), mRNA.
ACCESSION   XM_071832688
VERSION     XM_071832688.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3600
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3600
                     /gene="LOC139842565"
                     /note="uncharacterized LOC139842565; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842565"
     CDS             1..3600
                     /gene="LOC139842565"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688789.1"
                     /db_xref="GeneID:139842565"
                     /translation="MAPKRKGMSEEEVENKINQIITNLLPNIVAQAIDSMRKQGGETF
                     KHEDEEEDEYVEMKAVTGDAIHVWLGRFQKQRPLSFSTASTPVEAENWITHIKKMYRV
                     LSCEERFWVPLATYKLEGDAQRWWIALRQAKGGINFEDSLDWVDFKELFFRQYFSEVE
                     KEAVIREYANIKQGSDESINDFTKKFLRLVGLIGAAAGSSEDQARKYKWAVHGSYRSK
                     MINLKCFDVAEGNQLRIDNGPNNNNRGQLQVYLPQGQQRGNGNGGVNANAPCGTCGKN
                     HPGRVCYRSVGSCFACGEVGHLAKDCKNPRPGFVPRVPPPAPGGRIFAMTTARAADVT
                     GTITGHVFVHHRALFVLFDSGSTHSIVSVKSSKYLKVSPTWLSTPFTISTPMGSIEII
                     DRVYQNCRLEFNDCMFPANLFPMTMHDFDIILGMDWLSQHHATIDCYSKRILFGNHSI
                     PDCIFNGDLPEKSIKNLSIESPSLENIDVVREFPDVFPDELQGLPPVREVEFSIDLIP
                     GSQPISKAPYRMAPLELQELKEQLQELIDCGFIRPRGGFVMVVFVAGNSDSKTNESKE
                     EHENHLRVVLETLRSKKLFAKFSKCEFWLQQVAFLGHVVSAEGIMMDPSKIEAITNWS
                     RPTSVVEVQSFLGLAGYYRRFVEGFSTIILPFTKLLRKGKNFVWTDERQKSFDELNKR
                     LVSAAILALPSVSGGFQVYSDVSKHANVVADALSRKTYGSISCLVTHIREFERLDMGL
                     SKRGASGMLANLKFESDLITRIKEAQLDDGDLWIVFQNLEEGKVKEFREDDDGVIWCG
                     NQLCVPNDDVIHEALLFEAHSSPFSVHPGSTKMFQDLKQHFWWSGMKKDVARYVGKCL
                     THQQVKIEHQHASGLLQPLDIPVWKWDDISMDFVCGLPKTVKRHNVIWVVTDRLTKSA
                     HFLPIRMDYSVSKLSELFQQEIVRLHGVPSSTVSDRDPRFTSRFWKGLHKAWGTRLKL
                     STAFHPQTDGQSKRTIQISEDMLRAYALDWKGNWDEYLCLVEFAYNNSWQASICMAPF
                     EMLYGRKCRAPVCWNETGEKLIEGPELVRVTNEKVAIATNRLKEAQLRQKVYADKHRR
                     PLEFVVGDKVFLKVSPWKGIRRFGLKGKLSPRYIGPFEILDRVGEVSYRLALPPQLSH
                     VHNPEAIIEREERVTRKSSTLFVKVQWKNHSTSEATWELEETMWAEHPHLFAN"
     misc_feature    337..621
                     /gene="LOC139842565"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    805..>936
                     /gene="LOC139842565"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    958..1341
                     /gene="LOC139842565"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1057..1059,1063..1065,1069..1071,1144..1152,
                     1267..1269)
                     /gene="LOC139842565"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1057..1065
                     /gene="LOC139842565"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1057..1059
                     /gene="LOC139842565"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1144..1155,1165..1176)
                     /gene="LOC139842565"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    <1687..1815
                     /gene="LOC139842565"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    2002..>2124
                     /gene="LOC139842565"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    2413..2586
                     /gene="LOC139842565"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
     misc_feature    2632..2934
                     /gene="LOC139842565"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atggcaccga aaagaaaagg gatgtctgag gaggaggtag aaaacaagat taaccaaata
       61 atcacgaatt tgttacccaa cattgtagct caagctattg actctatgcg taagcaaggt
      121 ggcgagactt ttaagcatga agatgaagag gaggatgagt atgtggagat gaaagctgta
      181 acgggggatg ctattcatgt ttggctagga cggtttcaaa aacagcgtcc tttgtcattc
      241 agcactgcta gtactcctgt tgaagctgag aattggatca ctcacattaa gaagatgtac
      301 cgagtgctta gttgtgaaga gagattttgg gttccattgg ctacttataa actagaaggg
      361 gatgctcagc gttggtggat cgctttgaga caagcgaaag gaggtatcaa ttttgaggat
      421 tcgttagatt gggttgattt caaggagttg tttttccgtc agtacttttc tgaggtggag
      481 aaagaggctg tgattcggga gtatgcgaat attaagcaag ggagtgatga gtcaattaat
      541 gatttcacta agaagttttt aagacttgtg ggattgattg gggctgctgc tgggtcttcc
      601 gaggaccaag cccgtaagta caaatgggct gttcatggga gttaccgctc taaaatgatt
      661 aatctgaaat gttttgatgt cgctgaagga aatcagctaa ggattgacaa tgggccaaat
      721 aataataacc gtggtcaatt acaagtgtac cttccccaag ggcaacaaag gggtaacgga
      781 aatggtggtg ttaatgccaa tgcaccttgt gggacttgtg gaaagaatca tccgggaaga
      841 gtttgttatc gtagtgtggg ttcatgtttt gcttgtggag aggttggtca cttagctaag
      901 gattgcaaga atcctagacc tgggtttgtt ccgagggttc ctcctccagc tcctggtgga
      961 cgcatctttg ccatgactac tgctcgggct gctgacgtaa caggtactat tactggtcat
     1021 gtatttgtac accatcgtgc cctcttcgtt ctgtttgatt ctggctctac gcactcgatt
     1081 gtgtctgtta agagctcgaa atatttgaaa gtgtctccaa cttggttgtc tactccgttt
     1141 acaatctcta ccccaatggg tagtattgaa attatagatc gtgtgtatca aaactgccgt
     1201 ttggaattca atgactgcat gtttcccgca aatctatttc ctatgaccat gcatgacttt
     1261 gacattattc ttggcatgga ttggttatct cagcatcacg cgactatcga ttgctattct
     1321 aagaggattt tgtttggaaa tcattctata cccgattgta tctttaatgg tgatcttcct
     1381 gaaaaatcta ttaagaattt gtctatcgag agtccttcac ttgaaaatat tgatgttgtt
     1441 cgagagtttc ctgatgtatt tcctgacgaa ttgcaaggtt tacctccagt tcgtgaagtt
     1501 gaattttcga ttgatttgat tcctggttct caaccgatat caaaagctcc ttatcgtatg
     1561 gcaccactcg agttgcaaga acttaaggag caattacaag aattgataga ttgtggattt
     1621 attcgaccaa gaggtggttt tgttatggtg gttttcgttg caggtaatag tgatagcaaa
     1681 acaaatgaga gtaaagaaga gcatgaaaat catcttcgcg ttgtacttga aaccctccga
     1741 agtaagaaat tgtttgcaaa gttctctaaa tgcgaatttt ggttgcaaca agttgccttt
     1801 ctgggtcatg ttgtatcagc tgagggtata atgatggatc catcgaaaat tgaggctatt
     1861 acaaattggt caagacctac ttcagttgtt gaggttcaaa gttttcttgg tttagctggt
     1921 tattatcgaa gatttgttga aggtttttca acgattattt tgccgtttac caagttgttg
     1981 aggaaaggga aaaattttgt gtggaccgat gaacgacaaa aaagttttga tgagttaaat
     2041 aaaagacttg tgtccgctgc tattcttgca ttgccatccg taagtggggg ttttcaagtc
     2101 tatagtgacg tttctaagca tgcgaatgtg gtagccgacg ctttgagtag aaagacatat
     2161 ggtagtatct catgtttggt tactcacatt cgagaattcg aaagacttga tatgggattg
     2221 agtaaaagag gagcatcggg gatgttggca aatctaaaat tcgagtctga tttaattact
     2281 agaataaaag aggctcaatt ggatgatggg gatttgtgga tagtgtttca aaatttggaa
     2341 gagggtaaag tgaaagagtt cagagaagat gatgatggtg ttatttggtg tgggaatcaa
     2401 ttgtgtgttc ctaatgatga tgttattcat gaggctctgt tgtttgaggc tcacagctca
     2461 cctttttctg tacatcctgg ttcgaccaaa atgtttcagg atttaaagca gcacttttgg
     2521 tggagtggca tgaagaaaga cgttgctaga tatgttggga agtgcctcac tcatcaacaa
     2581 gtaaagattg agcaccaaca tgctagtggt ttattgcagc cgttggacat tcccgtgtgg
     2641 aagtgggatg atatctcaat ggatttcgtc tgtggtttac caaagactgt gaaaagacac
     2701 aatgttattt gggtggtgac tgatagatta accaaatcgg ctcatttctt gcctatccgc
     2761 atggattatt cggtaagtaa gctatccgag ctttttcagc aggaaattgt gagattacac
     2821 ggggttcctt catccaccgt atccgatcgt gatcctcggt ttacatctag attttggaag
     2881 gggttacaca aagcttgggg tacgcgattg aagcttagta ctgcttttca tccacaaacg
     2941 gatggacagt ctaagcgtac gatacagata tcagaagata tgcttcgagc gtatgcctta
     3001 gattggaagg gaaattggga tgagtactta tgtttggtgg aatttgctta taataatagt
     3061 tggcaggcaa gtatctgtat ggcaccattt gagatgcttt atggtcgaaa gtgtagagcg
     3121 ccagtttgtt ggaatgaaac gggagagaaa ttgattgaag gacctgagtt ggttagagtg
     3181 actaatgaaa aggtcgctat agctacgaat cgactgaagg aggcccaatt gagacagaaa
     3241 gtgtatgccg ataaacaccg acgtccgtta gagtttgtgg tgggtgataa ggtgttttta
     3301 aaggtgtcac cttggaaggg tatacgtcgt tttggtctga aaggaaagct cagtcctcga
     3361 tatattggac cgtttgagat attggatcga gttggtgaag tgtcttatcg tttagcatta
     3421 ccgccacagt tatctcatgt tcataatccc gaagctatta tagaacgcga ggagagagta
     3481 actcgtaaaa gctccaccct tttcgttaaa gttcaatgga agaatcattc tactagcgag
     3541 gcaacttggg aactcgagga aaccatgtgg gccgagcacc ctcatttgtt tgctaattag
//
LOCUS       XM_071832689            2178 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842566), mRNA.
ACCESSION   XM_071832689
VERSION     XM_071832689.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2178
                     /gene="LOC139842566"
                     /note="uncharacterized LOC139842566; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842566"
     CDS             1..2178
                     /gene="LOC139842566"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688790.1"
                     /db_xref="GeneID:139842566"
                     /translation="MANNTALLEALQGIQQQFQQQAQQQAEHNTRVLEAIANLNIQPR
                     NQERQPRNRPPIRADNLDDSSSSEVDVLVAVNPQGDRLPKIRADIPTFSGSLDIEGFL
                     DWVSETEKYFELMDIKEETQVKDVAYKLKGPALSWWDNLQTGRRCQRKQPVRTWRKMK
                     RLMFARFLPVDYEPTLYASYHNCKQYSRGVTEYSEEFLRLASRNNLNESDSQQGLVLI
                     THEDNQYFIGPNDVDNEEEEEHDDEGYSYVVRRLVLASPKTIEDSQRLNIFRTRCKIN
                     QDIVNVIIDGGSSENIISRDIVTRLKLTPRKHPTPYKIGWIKAVGEVRVTKQCEVPIS
                     MGKYKDTIVFDIVDMDACHVLLGRPWQFDLRVIHKGKENTYTFSKDGHKFTLCPYSNS
                     SIPRASKEKEKHITLCSREAFLAEVRNAPTIFAVVIKGNDMSIKNTPPKLHHLLSKFE
                     SIMPDDIPDGLPPLRDIQHQIDFVPGASIPNQPHYRMSPTEHAILQDMVEELLKKGYH
                     QLRIRPGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMHLMNQVLKPVIDKFVVVYFD
                     DILIYSTSEDDHLEQLRQVLEALKNNQLYVNLKKCSFLTDKLLFLGFVVSADGIHVDD
                     EKIKAIQDWPTPQTISEVRSFHGLATFYRRFIRDFSTIMAPITERLLKERFQWSASAD
                     QRFSLIKDKLTAPVLILPNFEKAFELETDASIVGIGAVLSQEK"
     misc_feature    376..>609
                     /gene="LOC139842566"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    811..1080
                     /gene="LOC139842566"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(853..855,859..861,865..867,940..948,1063..1065)
                     /gene="LOC139842566"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    853..861
                     /gene="LOC139842566"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    853..855
                     /gene="LOC139842566"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(940..948,955..957,967..978)
                     /gene="LOC139842566"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    <1507..1845
                     /gene="LOC139842566"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(1507..1521,1606..1611,1690..1692,1696..1701,
                     1831..1836)
                     /gene="LOC139842566"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(1507..1521,1606..1608,1696..1698)
                     /gene="LOC139842566"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
     misc_feature    1609..1611
                     /gene="LOC139842566"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238825"
     misc_feature    2029..>2172
                     /gene="LOC139842566"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
ORIGIN      
        1 atggctaaca acaccgcact actcgaagcc ctacaaggta ttcaacaaca atttcaacaa
       61 caagcacaac aacaagctga acataatact cgcgttcttg aagcaatcgc gaacctgaat
      121 attcaaccaa ggaaccaaga aagacaacca cgaaatcgtc ctcctatcag agctgataat
      181 ttggatgact cttcatcaag tgaagtggat gttctggttg ctgttaatcc acaaggagat
      241 cgattaccta agattcgagc cgacatccca actttctctg ggtcacttga catcgaaggt
      301 ttccttgatt gggtttccga aactgaaaaa tactttgagc ttatggatat taaggaagag
      361 actcaagtaa aagatgttgc ttacaagctt aaaggcccag ccttatcatg gtgggacaac
      421 cttcaaacgg gtcgtcgttg ccaacgaaaa cagccggttc gcacttggag gaagatgaag
      481 aggttgatgt ttgcacgttt tcttcctgtt gattatgaac cgacacttta tgctagttat
      541 cataattgca aacagtattc tcgaggtgtc accgaatact cagaagaatt tcttagatta
      601 gcttctcgaa ataatttgaa cgaatcggat tcacaacaag ggctcgtttt aataacgcat
      661 gaagacaatc aatattttat cggtcctaat gatgttgata acgaggaaga ggaagaacat
      721 gatgacgaag ggtattcata tgttgtgcgg agattggtgc ttgcttcccc taaaacaatt
      781 gaagactccc aaagacttaa tatctttaga accagatgca aaattaatca agatatagtt
      841 aatgtcatca tcgatggtgg gagtagtgaa aacataattt cacgagatat tgtcacacga
      901 cttaagttga caccgcgaaa gcatccgaca ccatacaaga ttggctggat taaagccgtt
      961 ggagaagtac gagtgaccaa acaatgtgaa gttccgattt ctatgggtaa gtacaaagac
     1021 acaattgttt ttgacattgt tgatatggat gcttgccacg tcttgctagg acgaccttgg
     1081 caatttgatc tacgtgtcat ccacaagggg aaggaaaaca cttatacatt ctccaaggat
     1141 ggtcacaaat tcacattgtg tccttattct aacagtagta tcccgagagc atccaaagaa
     1201 aaggaaaaac atattacact gtgttctcga gaggcattct tagccgaggt aagaaacgcc
     1261 ccaacgatct tcgccgtggt cataaaaggg aacgacatgt caataaagaa cactccaccg
     1321 aagcttcacc atttattatc caaatttgag agtattatgc ccgacgatat cccagatggt
     1381 cttcctcctt tgagggatat tcaacaccag attgattttg tacctggggc tagtattcca
     1441 aatcaacctc attatcgaat gagcccaaca gaacatgcta tcttacaaga tatggttgaa
     1501 gaacttctta agaaagggta ccatcaactt cgtattcgtc caggagacga gtggaaaact
     1561 gcctttaaga cgaaagaggg cctttacgag tggcttgtta tgccatttgg cctttcaaat
     1621 gcccctagta cttttatgca tctaatgaat caagtcttga agccggttat tgataagttc
     1681 gtggttgttt actttgacga catccttatt tatagcacat cagaagatga ccatttagag
     1741 cagctacgac aagttcttga agcactgaaa aataatcagt tatatgtaaa cctcaagaaa
     1801 tgtagtttcc tgaccgacaa actacttttc ttagggttcg tggttagcgc ggatggaatc
     1861 catgttgatg atgaaaagat aaaagcaata caagattggc ctacaccgca aacgattagc
     1921 gaagttcgga gttttcatgg gctggcaacg ttctatcgac gatttattcg tgattttagc
     1981 acaatcatgg ctcctattac agaacgctta ctgaaagaac gttttcagtg gagtgcttca
     2041 gctgatcaaa gattttcact aatcaaagac aagctaacag cccctgttct aatcctacct
     2101 aattttgaaa aggcatttga attagaaact gatgcttcca ttgtaggtat aggagcggtg
     2161 ctatcacaag aaaaatga
//
LOCUS       XM_071832690             603 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein DMP4-like
            (LOC139842567), mRNA.
ACCESSION   XM_071832690
VERSION     XM_071832690.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..603
                     /gene="LOC139842567"
                     /note="protein DMP4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842567"
     CDS             1..603
                     /gene="LOC139842567"
                     /codon_start=1
                     /product="protein DMP4-like"
                     /protein_id="XP_071688791.1"
                     /db_xref="GeneID:139842567"
                     /translation="MDTIEHDALSQALLKKIPKKTITQKAIKNAFKLTAHLSNLLPTG
                     SVLVFQTLTPIFTNGGKCQTQVSITLTSILLSICCISCFVLCFTDSFHDKKGKVRYVI
                     ATFSGLWVIDGSTRVPPEKASEYKIKLIDVFHGLLSVEVFGTIAMFDKNVVDCFYPKL
                     SEEFNLLVSILPIGVGVLCSLLFGVFPTTRHGIGFPVTER"
     misc_feature    100..585
                     /gene="LOC139842567"
                     /note="Protein of unknown function (DUF679); Region:
                     DUF679; pfam05078"
                     /db_xref="CDD:461544"
ORIGIN      
        1 atggacacaa tcgaacatga cgcattaagc caagcattat tgaaaaagat cccaaagaag
       61 acgataacac aaaaggcgat caagaatgcg ttcaagctca cagctcattt atctaacctt
      121 cttcccacag gctcggtcct tgtattccaa acgctcacac cgattttcac caatggaggc
      181 aaatgtcaaa cacaagttag cataacttta acatcaatac ttctttctat ttgttgcatc
      241 tcttgctttg tgttatgttt tactgatagt tttcatgata aaaaaggaaa ggttcggtat
      301 gtaattgcga cgttttctgg tttgtgggtc attgatgggt cgactagagt tccaccagag
      361 aaggcgagcg agtataagat taagctcatt gatgtatttc atgggttgtt atcggttgag
      421 gtttttggga caattgctat gtttgataaa aatgttgtgg attgttttta tccaaaacta
      481 tcagaggaat ttaatctgtt ggtatcaata ttaccgatag gtgttggagt gttgtgtagc
      541 cttttgtttg gtgtttttcc tacaactagg catggaattg gttttccggt cacggaaaga
      601 tag
//
LOCUS       XM_071832691             843 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides zinc finger CCCH
            domain-containing protein 61-like (LOC139842569), mRNA.
ACCESSION   XM_071832691
VERSION     XM_071832691.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..843
                     /gene="LOC139842569"
                     /note="zinc finger CCCH domain-containing protein 61-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139842569"
     CDS             1..843
                     /gene="LOC139842569"
                     /codon_start=1
                     /product="zinc finger CCCH domain-containing protein
                     61-like"
                     /protein_id="XP_071688792.1"
                     /db_xref="GeneID:139842569"
                     /translation="MDDVSTEQHHKIHIKKSSFRDLEIPPRKLLTRQQNVDSPIILPE
                     EKLLHKFLPSNSSHDDDESDPYASDEFRMYEFKIRKCTRSRSHDWTACPFAHPGEKAR
                     RRCPRRFNYSGTVCADFRRGSCTRGDVCEFAHGVFECWLHPSRYRTEACKDGKTCQRK
                     ICFFAHSPSQLRSLTLPSQHCAYCRCGSKIHHTNSPTSVLDVDSSGGSPISRFSEKKG
                     LINRNEIKELMNSMRAMSMNEMDQELLFAFCPSGSGRVSEERFVNEGSTSGPDFEWVN
                     DLLT"
     misc_feature    328..405
                     /gene="LOC139842569"
                     /note="zinc finger; Region: ZnF_C3H1; smart00356"
                     /db_xref="CDD:214632"
ORIGIN      
        1 atggatgatg tttctacaga acaacatcac aaaattcata tcaagaaatc atcttttcgt
       61 gaccttgaaa tcccaccccg aaaacttctc actcgtcaac aaaacgttga ctcaccaata
      121 attcttcctg aagaaaagtt gttacacaaa tttcttccat caaattcatc tcatgatgat
      181 gatgaatctg atccgtacgc atccgatgag tttcggatgt acgaattcaa gattcgtaag
      241 tgtacacgta gccgatcgca tgactggact gcttgtcctt ttgcacatcc cggtgaaaaa
      301 gcaagaagaa ggtgtccacg tagatttaat tattccggga ccgtttgcgc tgacttccga
      361 cgtggcagtt gtacacgtgg cgatgtttgt gagtttgctc atggtgtttt tgagtgttgg
      421 cttcatcctt ctcgttaccg tactgaagca tgtaaagatg gtaaaacttg tcaaagaaaa
      481 atttgttttt tcgctcatag tcctagtcag ctccgatcgt tgactttgcc tagtcagcat
      541 tgtgcttact gccgttgtgg ctcaaagatt catcatacga attctcctac gtccgtttta
      601 gatgtggaca gttctggggg gtctccgatt tcgcgttttt cggagaaaaa gggactgatt
      661 aatcgtaacg aaattaagga actgatgaat tcaatgaggg ctatgagtat gaatgaaatg
      721 gatcaggagt tgttgtttgc gttttgtcca tctggatcgg gtcgggttag tgaagagagg
      781 tttgtgaatg aggggtccac aagtggacct gattttgagt gggtcaatga tcttctcacc
      841 taa
//
LOCUS       XM_071832693            2319 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein TPX2-like
            (LOC139842570), mRNA.
ACCESSION   XM_071832693
VERSION     XM_071832693.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2319
                     /gene="LOC139842570"
                     /note="protein TPX2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842570"
     CDS             1..2256
                     /gene="LOC139842570"
                     /codon_start=1
                     /product="protein TPX2-like"
                     /protein_id="XP_071688794.1"
                     /db_xref="GeneID:139842570"
                     /translation="MDDTGDITIDVDYEFSAPKFFDFIQGETEDQIRDAQLWFDTALT
                     YAPSPVMHKVKSTRAFQSDSLCEFTQTEVSESVVIEHDPKENITVNAAKDKNSYFPPN
                     RLCSGEKTEKEIKKDDEQTKTEKDTDNPQEACSPKPPMASQKKKDILQTESKKQETAR
                     RIASAVKNPSALKLKAQSQAKCAKTPATLRRDTNQVNKIGVTSNLALENQAIKRQKLE
                     GGKTRQILNVKTQILPHKARPGVVNGSNSNVATPLGARKGERKMYAREPASVPFVSMA
                     EMMRKFQSGTRDLNLPPRPSSISHGDPSQVMQRKPKLTLTKPKEPTFETSQRVRSVKL
                     KSSAEIEEEMMAKIPKFKARPVNRKILEAPTLPAMKRSIPQIPQFQEFHLETMERANL
                     NAETSTIASTETAPQIHQWKPSLTTPKTPPLQTLLRARPPKIKTTEELEQEELEKAPK
                     FKARPLNKKIFESKGEQGLFYNKKRQVTVPQEFHFAIDERIPPPATNVADLFDKLSLC
                     SADSHNSKRIPRITAPSPFHLHTEERGAEKEKRFVMEIIHKQIEDERARVPKATPYPY
                     TTDYPVVPPKPEPKQCTKPEPFQLESLVRHEEEIQREMEERRRLEEEEARMRLFKAQP
                     ILKEDPIPVPEKVRRPLTEVQGFDLHVEHRAADRAEFDKKIKEKEMMYKRYRDETESS
                     KMMEEEKALKQLRRTLVPHARPVPNFNKPFLPRKSSKGVTKPRSPRLKVAERRKMVVT
                     AAASSAASNMR"
     misc_feature    952..1455
                     /gene="LOC139842570"
                     /note="Cell cycle regulated microtubule associated
                     protein; Region: TPX2_importin; pfam12214"
                     /db_xref="CDD:463495"
     misc_feature    1939..2169
                     /gene="LOC139842570"
                     /note="Targeting protein for Xklp2 (TPX2) domain; Region:
                     TPX2; pfam06886"
                     /db_xref="CDD:462029"
ORIGIN      
        1 atggacgata caggagatat aacgattgat gttgattacg aattctctgc gcccaaattt
       61 tttgatttca ttcaaggaga aactgaagat caaattcgtg acgcacagct ttggttcgat
      121 acggctctta cttacgctcc ttcacctgtt atgcacaagg ttaagagtac aagagcgttt
      181 caatcggata gcctttgtga attcactcaa acagaagtgt ctgagagtgt agttattgag
      241 catgatccca aggaaaatat aactgtaaac gctgcaaaag ataaaaatag ttactttcct
      301 cccaatcggt tatgctctgg tgagaagaca gaaaaggaaa tcaagaaaga tgatgaacaa
      361 actaagacag aaaaagacac agataatcct caagaagcat gcagcccaaa accaccaatg
      421 gcttctcaaa agaagaagga tattctacaa acagagtcaa agaagcaaga gacagccaga
      481 agaattgcta gtgcagtgaa gaatccgtct gcgctcaaat tgaaagctca atcacaagca
      541 aaatgtgcta aaacccctgc tactttgaga agggatacaa atcaagtaaa taagattggt
      601 gttacttcta atcttgcttt ggaaaaccaa gctattaaga ggcagaaact tgaaggagga
      661 aaaactagac agattttgaa tgtcaaaaca caaattttgc cccacaaagc aagaccaggt
      721 gttgtcaatg gcagtaattc taacgtagcc acaccattag gagcacgcaa gggagaaaga
      781 aagatgtatg ctcgtgagcc cgcatcagtt ccatttgttt cgatggctga aatgatgaga
      841 aagttccaat ctggcacaag ggatctgaat ctgccccctc gcccttcctc gatatctcat
      901 ggtgatccta gtcaagtgat gcaaagaaag cctaaattga ctctgaccaa accgaaagaa
      961 cccacgtttg aaacatctca gcgtgttcgc tcagttaagc tcaagagttc agcagagatt
     1021 gaggaagaaa tgatggctaa aattcccaaa tttaaggcgc gcccagttaa ccgcaagata
     1081 cttgaggctc caacattacc agcaatgaag aggagtatac cccagattcc tcaatttcaa
     1141 gaatttcact tggaaacaat ggaaagggca aatttgaatg cagaaacttc aacaattgct
     1201 tcaacagaaa ctgcacctca gattcatcaa tggaagccta gtcttacgac acctaaaaca
     1261 cctcctctac aaacattatt aagagcacga cctcctaaaa ttaaaactac cgaagaacta
     1321 gaacaagaag agctggagaa agctccaaaa ttcaaggcca gacctttgaa caaaaagata
     1381 tttgaaagta aaggtgagca gggtctgttt tataacaaaa aacgacaagt cacagttcct
     1441 caagaatttc actttgctat agatgaaagg attccacctc cagccacaaa tgttgctgac
     1501 ttgtttgata agctttcatt gtgctccgcc gactcccata attcgaaacg aattcctcgg
     1561 atcactgccc ccagtccttt ccatctgcac accgaggaga gaggggcaga aaaggaaaaa
     1621 agatttgtga tggaaattat acacaagcaa atagaagatg agagagctcg agttcctaaa
     1681 gccacgccat atccttatac taccgattac cctgtggttc ctccaaaacc cgagccaaaa
     1741 caatgcacca aacctgaacc gttccagctg gagagtttgg tgagacatga agaagaaatt
     1801 caaagagaga tggaagaacg aagaaggttg gaagaggaag aagcaaggat gagattattc
     1861 aaggctcaac caatactgaa agaggatccc attccggttc ctgagaaagt tcgtagacct
     1921 ctgactgaag ttcagggatt cgatctacat gtggaacacc gagcagcaga tagagcagaa
     1981 tttgacaaga aaattaaaga gaaagagatg atgtataaaa gataccgaga tgagacagag
     2041 tcctctaaga tgatggagga agagaaagct ttgaaacaac taagaaggac gttggtgcct
     2101 cacgcaaggc ctgtgcctaa tttcaacaag cctttcttac cccgaaagtc atcaaaagga
     2161 gtcacaaaac caagatcgcc aagattgaag gtagccgaaa ggagaaagat ggtggtgact
     2221 gcagcagctt ctagtgcagc atcaaacatg aggtgatttt tttgttggcc cccctccata
     2281 ttataaatca tattcaaatt catatgggaa aaatagtta
//
LOCUS       XM_071832694             534 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842572), mRNA.
ACCESSION   XM_071832694
VERSION     XM_071832694.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..534
                     /gene="LOC139842572"
                     /note="uncharacterized LOC139842572; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842572"
     CDS             1..534
                     /gene="LOC139842572"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688795.1"
                     /db_xref="GeneID:139842572"
                     /translation="MDTVTQVDADQMWNSMASTIRDVAKETLGVAVGTSRGHKSGRES
                     WWISDEVQTKVVLKQLRFRELITCRDRTSDERTRAEERYKEANREAKKVVARAKDKAY
                     EDLYRKVDSKEGANDIFRIAKARDRRRRDVDNIKFIKDEVGQTIVKEEEIRKRWEWYF
                     SSLFVGEGPGNRTIPEQ"
ORIGIN      
        1 atggatactg ttactcaagt ggacgcagac cagatgtgga atagtatggc atcaactatt
       61 agagatgttg ccaaggaaac cttaggggtg gcagtaggga catcgagagg acataagtct
      121 ggtagagaat catggtggat tagtgatgag gttcaaacca aagttgtgct taagcaactg
      181 aggtttaggg agctcattac gtgccgggac aggacaagtg atgagagaac tagggcagaa
      241 gagaggtata aagaagccaa tagagaagct aagaaggtcg ttgcccgtgc aaaagataaa
      301 gcgtatgaag acttgtatag gaaagtagac tctaaagaag gagcaaatga tattttcagg
      361 attgcaaaag ctagggaccg taggaggagg gatgtagata acatcaagtt tatcaaggat
      421 gaagttggtc aaaccatagt gaaggaagaa gaaattagga aaagatggga atggtatttt
      481 tcatctcttt tcgtgggtga aggacccggg aataggacaa ttccagaaca ataa
//
LOCUS       XM_071832695             816 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842573), mRNA.
ACCESSION   XM_071832695
VERSION     XM_071832695.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..816
                     /gene="LOC139842573"
                     /note="uncharacterized LOC139842573; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139842573"
     CDS             1..816
                     /gene="LOC139842573"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688796.1"
                     /db_xref="GeneID:139842573"
                     /translation="MSSCPGKINSTHTHGYLRSCPISLGADSLVKSKVDILCVQETIW
                     RGEEAVDIGDYRLWFSGSRVARNGVGIFIGPLYKNNIVGVDRCSDRIMSVRVVIQEET
                     YMVICTYAPHAGLGDEEKSRFWESLDEVVRSCPVDHRLLIGGDLNGHIGTVSDGYTGV
                     HGGFGYGVRNEEGRSILEFAVAHYLVVANSFFRKTEAHLATFHSGGHSTQIDYLLLRK
                     GDLRACKDCRALTTWTRFTQHRLLVKDLVLQMRVTRRVRPAQPRILWKNLNEG"
     misc_feature    97..738
                     /gene="LOC139842573"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(121..123,325..327,433..435,439..441,634..636,
                     712..717)
                     /gene="LOC139842573"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(121..123,712..714)
                     /gene="LOC139842573"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(325..327,439..441,715..717)
                     /gene="LOC139842573"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
ORIGIN      
        1 atgtcaagtt gtccgggtaa gattaactcg acacatacgc atggttactt gaggtcatgt
       61 cctattagct taggggcgga ctcgttagtt aagagtaaag tggacatatt gtgtgttcaa
      121 gagaccatat ggaggggtga agaggcggtt gacattggcg actacaggtt gtggttttcg
      181 ggttctagag tagctagaaa cggggtaggg atttttatag gaccccttta taagaataat
      241 attgtgggtg tggataggtg tagcgatagg attatgtcgg ttagggtggt tatccaggag
      301 gagacataca tggtcatttg cacttacgca cctcatgctg gtttaggaga tgaagaaaaa
      361 agtcgctttt gggaatcgtt agatgaagtt gtgaggagtt gccccgttga ccatcgtttg
      421 cttattgggg gtgaccttaa tggacatata ggaacggttt cggacggtta tacgggtgtc
      481 catgggggct ttgggtacgg agttcgaaat gaagaaggac gctctattct cgaattcgcg
      541 gttgcccact atttggttgt tgcaaactct ttttttagga agacggaagc acatctagca
      601 actttccata gtgggggaca tagtacccag attgactatt tgctacttcg taaaggggac
      661 cttagggctt gcaaagactg tagagccctg actacctgga cccgtttcac ccagcacaga
      721 ttattggtca aggacttggt tctgcaaatg agggttacta ggagagtgag acccgcccaa
      781 cctaggatcc tttggaagaa tctgaatgaa gggtaa
//
LOCUS       XM_071832696             537 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin-induced protein
            6B-like (LOC139842574), mRNA.
ACCESSION   XM_071832696
VERSION     XM_071832696.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..537
                     /gene="LOC139842574"
                     /note="auxin-induced protein 6B-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842574"
     CDS             106..537
                     /gene="LOC139842574"
                     /codon_start=1
                     /product="auxin-induced protein 6B-like"
                     /protein_id="XP_071688797.1"
                     /db_xref="GeneID:139842574"
                     /translation="MSPGIGKSSKIRHIVRVRQMLCRWRKRAMSSSPSRMLTATDVPA
                     GHVAICVGSSCRRFIVRATYLNHPVFQKLLMEAEEEYGFCNIGPLTIPCEESKFEEIL
                     RFVAKPEYNTVNKSDRFDEFQRSCHVGYAPESKPLLHGSVH"
     misc_feature    157..414
                     /gene="LOC139842574"
                     /note="Auxin responsive protein; Region: Auxin_inducible;
                     pfam02519"
                     /db_xref="CDD:460580"
ORIGIN      
        1 ccataaggcc aacactccta taaaacaact ccaaaagtac tgtaaattta tctcaaaaac
       61 aaaacaccac acgctctctt cccacccgta ccgccggccg tcgatatgtc accagggatc
      121 ggtaaatcaa gcaaaatccg tcacattgtc agagtccgac aaatgctctg tcgttggcgt
      181 aaaagagcca tgtcatcatc accatctcgt atgttaacag caacagacgt gccagccgga
      241 cacgtggcga tctgtgttgg cagcagttgt cgtagattta ttgtaagagc aacgtatctt
      301 aaccacccag tgtttcagaa gcttttaatg gaagctgaag aagaatatgg attttgcaac
      361 ataggtccat taactattcc atgcgaagag tccaagtttg aagaaatact ccggttcgtt
      421 gctaaaccgg aatataatac ggttaacaaa tccgaccggt tcgatgagtt ccaaagatct
      481 tgtcacgtgg gttatgctcc ggaatctaag cccttacttc atggatccgt gcattaa
//
LOCUS       XM_071832697            2001 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842575), mRNA.
ACCESSION   XM_071832697
VERSION     XM_071832697.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2001
                     /gene="LOC139842575"
                     /note="uncharacterized LOC139842575; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842575"
     CDS             1..2001
                     /gene="LOC139842575"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688798.1"
                     /db_xref="GeneID:139842575"
                     /translation="MECRRYSCLAWVVYTGFQVASVTYISRLQNLLFDLFEISDVIDL
                     LSVMCAVNQPGDTHPKSVKKRKQSTHQYAAECVGSSDPFVFGSFDGHGVSSAGMTSNI
                     DQNPFVSSLQSVQSYHQHSSVSQGVTNDYEDIGDCNCVCSYCGAMFWYEERLRVSPSS
                     LNYNRCCEGGRVSLPREEVPPQMIIDLLGDKQFMDNIKAYNQMFSMASYGAHIDDHVN
                     NGMGPYVFKIFGQVYHWIGSLCPEEVKLFRTARDKINESDVPDLRIRLFSVIGSRQYE
                     YPTYDALGAIVYGFDDGTRTDYDLIVECKGGTPQCVNKLHMSYMSLQFPLLFVFGQPG
                     YHPGLTLRSISGRTSRHKKKLTMNTFYIYQLHDRFNQFGLLSRCGRLFQQYIVTVYCT
                     RGDHYGSEVGSRTIFPASFTGGPRYMYSHYLDALAICRVYENPRFFITFTCNSKWPEI
                     KRYLHKYSHLSANDRADIISRVFHMKVRIYVSVLKEEELLGSWKAMLYTIEFQKKGLP
                     HCHTLLWTHSLSNSFKPHDVDWYISAELPDPTRDPKAFKVVSEMMMHGPCGLVNKSAP
                     CIQDVEISPSGVFNRDNVCLKRFPKVYNEATYFDKDGFVHYRRRNSGISVDKGICSQD
                     NGYVVPYNRALWLKFHAHINIEWCGWTMLIKYLFKYISKGSD"
     misc_feature    1078..1542
                     /gene="LOC139842575"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atggagtgtc gcaggtatag ctgcttggcg tgggtggttt acacgggttt tcaggttgcc
       61 agtgtcacat atatttcgcg tttacagaat ttgttatttg atttgtttga aatttcggat
      121 gttattgatt tactttctgt gatgtgcgct gttaaccaac ctggtgatac acatcctaag
      181 tcagttaaaa aaagaaaaca atcaactcac caatatgcag ctgaatgtgt tggatcttcc
      241 gatcctttcg tctttggttc ctttgatggt catggcgtat catctgctgg aatgacttct
      301 aatatagatc agaatccatt tgtttcatct cttcagtctg ttcaatcgta tcatcaacat
      361 tccagtgttt cacaaggtgt tactaatgat tatgaagaca ttggtgattg taattgtgtt
      421 tgttcttatt gtggtgctat gttttggtat gaagaacggt taagggtgtc accatcttct
      481 ttgaattata atcgttgttg cgaaggtggt cgtgtttctt tacctcggga agaggttcct
      541 ccacaaatga ttatagactt attaggcgat aagcaattta tggataatat aaaggcatat
      601 aatcaaatgt ttagtatggc ttcttatggt gcgcatatag atgatcatgt taataatggt
      661 atggggccat atgtatttaa gatttttggg caagtgtacc attggatagg atctttatgt
      721 cctgaagaag taaaactctt tagaacggca agggataaga ttaacgagtc cgatgtgcca
      781 gatttgagga ttaggttgtt tagcgtgata ggttcaagac aatacgaata tccaacttat
      841 gatgcattag gagctattgt ttatggcttt gatgatggca ctcggaccga ttatgatctt
      901 attgtcgagt gtaaaggagg tacacctcag tgtgttaata aattacatat gtcatacatg
      961 tcccttcagt ttcctctgtt gtttgttttt ggtcagccgg gctaccatcc aggactgaca
     1021 ttgagaagta ttagtggtag aacaagtagg cataagaaaa agttaactat gaatacgttt
     1081 tacatttacc aactacatga caggttcaat cagtttggtc ttctttcgag atgcggacgg
     1141 ctatttcaac agtacatcgt tactgtatat tgcactagag gtgatcatta tgggtctgaa
     1201 gttggatcaa gaactatttt tccagcatca tttacaggag gccctaggta tatgtatagt
     1261 cattacttag atgcgttagc catttgtcgt gtttacgaaa atcctagatt ctttatcacc
     1321 tttacctgta attccaaatg gccagagatt aaaagatatc tccataaata ttctcaccta
     1381 tctgctaatg atcgtgccga cataatttcg agagtttttc atatgaaagt caggatatat
     1441 gtctctgttt taaaggaaga agagttactc ggttcatgga aagcaatgtt atacactata
     1501 gagtttcaaa agaagggatt gccacactgt cacacgttat tgtggactca ttctctttca
     1561 aattccttca aaccgcatga tgttgattgg tacatatctg ctgagttacc agatccaaca
     1621 agggatccga aagcttttaa ggtagtatcg gaaatgatga tgcacggacc atgtggcttg
     1681 gttaacaaaa gtgcaccttg cattcaggac gtagaaatca gcccatcagg tgtgtttaac
     1741 agggacaatg tctgtttgaa gagattccca aaagtttata atgaagcaac atatttcgac
     1801 aaagatggat ttgtgcatta ccggaggcgt aactctggaa tttcagttga taaaggaata
     1861 tgcagtcaag ataacggata cgttgtgcca tacaatcgtg ccctgtggct caaatttcac
     1921 gcccatatca acattgagtg gtgtggatgg acgatgctca taaaatattt gttcaaatat
     1981 atatccaaag gctctgactg a
//
LOCUS       XM_071832698             933 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842577), mRNA.
ACCESSION   XM_071832698
VERSION     XM_071832698.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..933
                     /gene="LOC139842577"
                     /note="uncharacterized LOC139842577; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842577"
     CDS             1..933
                     /gene="LOC139842577"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688799.1"
                     /db_xref="GeneID:139842577"
                     /translation="MTVRDRTYCTYREACLVMGLLGDHREWLTAMDEAGAAVTSKELR
                     TLFCHILLYRDVADPAKLWRETWKLMSDDIPLRAVASLHMSSIIINSEELQGYILYEL
                     QIFLNEHSTNVSDFGLPLIPQHLLDDLQNRLIMEERNYDRDALAIERSILLSKLNQKQ
                     KMVCDTVINTNVNRKQELIFVYGHGGTGKNFLWKALTTSLRVEGKIVLAVASSGIASL
                     LLPSSQTAHSQFRIPLDLTDESVCNIKKKTQMATLLTKVELIIWDEVPMNDWKCVETL
                     DRMLRDIFDAPGIPFGGLSFILGEDFRQTLPFKK"
     misc_feature    466..>921
                     /gene="LOC139842577"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(553..573,787..789)
                     /gene="LOC139842577"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgacggtaa gagatcgcac ttactgtact tatcgcgaag cctgtttggt aatgggtctt
       61 ttaggtgacc acagggagtg gttaacagct atggatgagg caggtgcagc agtaacatca
      121 aaagaattac gtactctttt ctgtcatata cttttatacc gagacgttgc tgatccggcc
      181 aaactttgga gagagacgtg gaaattaatg tcggatgata ttcctctccg tgcagtagca
      241 tctttgcaca tgtcgagtat aattataaat tcagaagaat tacaaggtta tatactctac
      301 gagcttcaaa tttttctaaa cgagcattca acaaatgttt cagacttcgg tttgccattg
      361 atccctcaac atttactaga tgatttacaa aataggctta tcatggaaga gaggaactat
      421 gatcgtgatg cattagcaat agaaagatca atattgctga gtaagctaaa ccaaaaacaa
      481 aaaatggttt gtgatacagt tattaacacc aatgtgaacc gaaaacaaga actaattttc
      541 gtttacggtc acggaggtac ggggaaaaat ttcctttgga aagcccttac gacatcgtta
      601 cgagttgaag ggaaaatagt tttagctgta gcttcttccg gtattgcatc attactgtta
      661 ccatccagtc aaacagcgca ttcgcagttt agaataccac ttgatttaac agatgagagc
      721 gtttgtaata taaaaaagaa gactcaaatg gcaacactcc taacaaaagt agagctcatt
      781 atttgggatg aggtacccat gaacgattgg aaatgtgtag aaaccctaga ccgaatgtta
      841 agagacatct tcgatgctcc tggcattcct tttggaggtc ttagtttcat tttaggcgaa
      901 gattttcgac aaacgttacc atttaaaaag tga
//
LOCUS       XM_071832699             687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842578), mRNA.
ACCESSION   XM_071832699
VERSION     XM_071832699.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..687
                     /gene="LOC139842578"
                     /note="uncharacterized LOC139842578; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842578"
     CDS             1..687
                     /gene="LOC139842578"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688800.1"
                     /db_xref="GeneID:139842578"
                     /translation="MRLLQPNLSNTEKENIKTFAEWLLQIGDGNIGDPDDSDPQNTSW
                     VKIPDEYCITDNKNGLSNLISFIYNDELLRNLCVLQLQQKAIVCPKNETVDIINKTII
                     QKINKEERTYTCCDSAIPYNNDGGQTELLYPAEYLNSQNFPSLPPHVLTLKVGVPIIL
                     LRNLNIAGDVCNGTWMITTQLLTRHIEAEIITGTKVGQKVHLPRINLIHKDNVLPYIF
                     KRVQHPVNTP"
     misc_feature    <1..543
                     /gene="LOC139842578"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atgcgcctat tacaaccaaa tctctcaaat acagaaaaag aaaacatcaa aacgtttgca
       61 gagtggttgt tacagattgg ggatggaaac ataggcgacc cagatgacag cgatcctcag
      121 aatacatcat gggtcaaaat cccagatgaa tactgcatta ctgacaataa gaatggttta
      181 tcaaacctga tatcattcat atataatgac gaactgttac gcaacctatg tgtgttacaa
      241 ctgcagcaaa aagctattgt atgtccaaaa aatgaaaccg ttgatattat taataaaaca
      301 attatccaaa agatcaacaa agaagagaga acatatactt gttgcgattc tgctatacct
      361 tacaataatg acgggggcca aacagaattg ttatatcccg cagagtatct caactcgcaa
      421 aatttcccca gcctccctcc gcacgtgctc acactcaaag tcggcgttcc gataatacta
      481 ctaagaaatc taaacatagc tggtgatgtt tgcaacggaa catggatgat aacaacacaa
      541 ttgttaacac gacatatcga ggctgaaatc atcactggaa ccaaagtcgg gcagaaagtg
      601 cacctcccaa gaataaactt aattcataaa gacaatgtct taccctatat attcaaaaga
      661 gtccaacatc ccgtcaatac gccatga
//
LOCUS       XM_071832700             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842580), mRNA.
ACCESSION   XM_071832700
VERSION     XM_071832700.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139842580"
                     /note="uncharacterized LOC139842580; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842580"
     CDS             1..660
                     /gene="LOC139842580"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688801.1"
                     /db_xref="GeneID:139842580"
                     /translation="MTGKKSFARIREELKLGREATRVNMFKECYKIGEDEATRVFEKM
                     KDLTEKLGDGAIDAPGPDDVFSTVMGKAKNGTAEMYGLGVRANHMWGARPSRLAVSKA
                     NAQLMSRNAQLEKENAWLKAEKNNGPGAQNDGSRVHANGSGDHRLWNVAIGRLRSVDP
                     NTVLNGTELVHGWCEAHVQVAIKKDEALFRPYDYLKCIHDVTGTSIAWPAQLIELVRE
                     D"
     misc_feature    <4..249
                     /gene="LOC139842580"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
     misc_feature    <448..600
                     /gene="LOC139842580"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
ORIGIN      
        1 atgacgggga aaaaaagttt tgcaagaatt cgtgaagaac tgaagttggg aagagaggca
       61 actagggtga atatgtttaa agaatgttac aaaatcggtg aagatgaagc tactcgtgtc
      121 tttgaaaaaa tgaaagacct aaccgagaaa ctcggtgatg gtgcaattga tgcacctgga
      181 ccagatgatg ttttttccac agtaatgggt aaagctaaaa atggtactgc agaaatgtac
      241 ggacttggtg ttcgcgccaa tcatatgtgg ggtgcaagac ctagtcgatt agctgttagc
      301 aaagcaaatg ctcagctgat gtctagaaat gcacaacttg aaaaagaaaa tgcatggtta
      361 aaagccgaga agaacaatgg tccgggtgct cagaatgatg gttcgcgtgt tcatgctaat
      421 ggttcgggtg atcaccgttt atggaacgta gcaataggaa ggttgaggag cgttgatcca
      481 aatacggttc ttaatggaac agaacttgta catggttggt gtgaggccca tgttcaggtg
      541 gccattaaaa aagatgaagc tttgtttagg ccatatgatt atttaaaatg cattcatgac
      601 gtcactggta catctattgc ttggcctgct cagttaatcg agttggtacg tgaggattga
//
LOCUS       XM_071832701            2865 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842581), mRNA.
ACCESSION   XM_071832701
VERSION     XM_071832701.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2865
                     /gene="LOC139842581"
                     /note="uncharacterized LOC139842581; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842581"
     CDS             1..2865
                     /gene="LOC139842581"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688802.1"
                     /db_xref="GeneID:139842581"
                     /translation="MDSTWMSLCRSSPAYEKGLDKFIERIFSKKGKDGHIYCPCKYCG
                     NHKRVDRVQAKTHLLCDGFFEGYKIPNVYFKPDDTPTFEDADEDDMQALAQCVFNVFE
                     DEDEDDIQQTENQTVPNLNAEKFNKVLEDTKKELYPGCKFSVLSFIVRLFHSKCVGKC
                     NEKGFSMILDTMREAFPHAAIPKSLYELRKIIRDLGLGYEKIDACPNDCMLYWKENKD
                     KIKCDRLFMSPKMAGSMRWHEESRTKDGRLRHPADSPAWKTFDYENSEFAKEPRNVRL
                     GLASDGFNHFGNMSVSHSTWPVVLMPYNLPPWLCMKKPFLFLSLLIPGPSAPELWDTG
                     VNTYDASTKSYFTLRASLLWTVSDFPAYTNLSGWSTKGKLDCPSCHKETRSTRLSNSH
                     KEIFMAHRRWLELLHPFCMDKDSFDGTEEREGPPRSLTGEQVLAELKGFEIKFGKLVK
                     DNPSLPYNWKKRSIFFQLPYWKNNLIRHNIDVMHTEKHVCDSLIGTLMNIDGKTKDHL
                     KGRRDLEEMGIRHELHPEPLSNGKVYLPPTCFEMDKKEKEKFCNVLKEVKVPDGYAAN
                     ISICIQVKPTPKMLGLKSHDNHILMQQLLPVAIRNILPKHVRSVIMKLCRYLGTLKFY
                     VRNKSKPEGSIAEGYLAEECLSFCSLYLASDVETIHNKTSRNHDDGGDDTVLPIFCMP
                     GRPIGATNVVKLGYDTLAIAHSHVLFNCSEIDFLRTEHQNILSHQNPKKRKGDIQHLH
                     SQEFEEWLSDYVDEDMTSRDNRITSDIETLTNGPSEVVKKYKGYIINGFRFHIKDVEK
                     NRTTQNSRVILQALTSSFSSARDNNPIVGDVTYYGVLKDIIELQYGDEKKVVLFHCDW
                     ISSGYRIKVDENGFTTLDFRGLKQTKEPYILASQAQQVFYVADPSGIVENETIDMVIG
                     DLDGVIVDDDTLVTATDKNQIDHDQGRICECSTCVLEQGS"
     misc_feature    10..204
                     /gene="LOC139842581"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    733..1317
                     /gene="LOC139842581"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    <1786..1995
                     /gene="LOC139842581"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2515..2703
                     /gene="LOC139842581"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atggactcga cttggatgtc cttgtgtaga tcttcccctg catacgaaaa aggacttgac
       61 aaatttatag aacgtatttt ctctaaaaag ggaaaagatg gtcatatata ttgtccgtgc
      121 aaatattgcg gtaatcacaa acgggttgat cgggtccagg ctaaaacaca tttgctatgt
      181 gacgggtttt ttgaaggtta taaaattcca aatgtgtatt ttaaaccgga tgatacacca
      241 acatttgaag atgctgatga agatgatatg caagcattgg cccaatgcgt cttcaatgtg
      301 tttgaagatg aagatgaaga tgatatccaa caaactgaaa atcagactgt accaaactta
      361 aatgctgaaa agtttaataa agtattggaa gatacaaaga aagaattata tcctggctgt
      421 aagttctctg ttctttcgtt cattgttaga ctcttccatt caaaatgtgt tggaaaatgt
      481 aatgaaaaag gattcagcat gattcttgac acaatgaggg aagccttccc tcatgctgcc
      541 ataccgaagt cattgtatga attaaggaag ataataagag atttgggtct aggttatgag
      601 aaaattgatg cttgtccaaa tgattgtatg ttgtactgga aagaaaacaa ggacaaaatt
      661 aagtgtgaca gattgtttat gtctcctaaa atggccgggt cgatgagatg gcatgaagag
      721 agtcgtacga aagatggtag attaagacat cccgcagatt caccagcctg gaaaacattc
      781 gattatgaga atagtgaatt tgctaaagaa cctcgtaatg tgaggcttgg tttggcgagt
      841 gatgggttta accattttgg aaacatgagt gtttcacata gtacatggcc tgttgttttg
      901 atgccatata atctacctcc atggttgtgc atgaaaaaac cttttttatt cctaagttta
      961 cttatacccg gtccatctgc tccagagttg tgggatactg gagttaatac ttatgacgca
     1021 tcaactaaga gttacttcac actgcgtgct tctttgttat ggacggtaag tgactttcct
     1081 gcgtatacga atttatcggg ttggagcact aaaggtaaat tagattgtcc ttcatgccat
     1141 aaggaaacca gatcaacacg gttatcaaac tcccataaag aaatcttcat ggcacatcgt
     1201 cgctggttgg aattgttgca tcctttctgt atggataaag attcttttga tggcacggaa
     1261 gaacgtgaag ggccaccgcg tagcttaaca ggggaacaag tgcttgcgga gctgaaaggt
     1321 tttgaaataa aatttggaaa acttgtgaag gataacccat ccttaccata taattggaag
     1381 aagagaagta ttttttttca gttaccatac tggaaaaata acttaatacg tcataatata
     1441 gacgtaatgc atactgaaaa gcatgtatgt gacagtctca ttggaacgtt aatgaatata
     1501 gatggaaaga ccaaggatca tttaaaagga cgtcgtgatt tggaagaaat gggtattaga
     1561 catgaacttc atccagaacc tttatcaaat ggcaaagtgt atttgcctcc tacatgtttt
     1621 gaaatggata aaaaagaaaa agaaaaattt tgtaatgtgc taaaagaggt gaaagtgcca
     1681 gatggttatg ctgctaatat ttctatatgc attcaggtaa aacctactcc aaaaatgtta
     1741 ggcctaaaaa gtcacgataa tcatattttg atgcaacagt tgcttcccgt agcaataaga
     1801 aatattttac cgaaacatgt gcgttctgtt atcatgaagt tatgtcggta tttaggtaca
     1861 ttaaaatttt atgtgcgaaa caagagtaaa cccgagggtt caattgcaga aggatattta
     1921 gcggaagagt gtttgtcatt ttgttctctg tatttagcca gtgatgtcga gaccatacat
     1981 aataagacta gccgaaatca tgatgatggt ggtgatgata ctgtcttacc aatattttgt
     2041 atgcctggtc gaccaattgg tgcaacaaac gtagtaaaac tcggctatga cactttggct
     2101 attgcacact cacatgtgct gttcaattgt agtgaaatag atttcttacg aacagagcat
     2161 cagaatattc ttagtcatca aaatccgaaa aaacgtaagg gtgacattca acatttacat
     2221 agtcaggagt ttgaggagtg gctgtctgat tacgttgatg aggacatgac tagtcgggat
     2281 aacagaatca caagtgatat agagacattg acaaacggtc caagtgaggt tgtaaagaaa
     2341 tataagggat atatcataaa tggtttccga tttcacatta aagatgtaga gaagaatagg
     2401 acaacacaaa atagcagagt catacttcag gctctaacaa gtagcttctc gagtgctaga
     2461 gataacaatc ctattgtggg agatgtcact tactacggtg ttttaaaaga tataatcgag
     2521 ttacagtatg gtgatgagaa gaaagttgtt ttgttccatt gtgattggat atcaagtggt
     2581 tacaggataa aagttgatga gaatgggttt acgacactcg attttcgagg tctgaagcaa
     2641 actaaagagc cttatatcct agcttcacaa gcacaacaag tattctatgt tgcagatcct
     2701 agtggcattg tagaaaatga gactattgat atggttatag gagatttgga tggggtcatt
     2761 gttgacgatg atactttagt tactgctaca gataaaaatc aaattgatca tgatcagggg
     2821 cggatttgtg agtgttcaac atgtgtgcta gaacaaggct cataa
//
LOCUS       XM_071832702             672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At2g35280-like
            (LOC139842582), mRNA.
ACCESSION   XM_071832702
VERSION     XM_071832702.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..672
                     /gene="LOC139842582"
                     /note="F-box protein At2g35280-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842582"
     CDS             1..672
                     /gene="LOC139842582"
                     /codon_start=1
                     /product="F-box protein At2g35280-like"
                     /protein_id="XP_071688803.1"
                     /db_xref="GeneID:139842582"
                     /translation="MEVTQPKTIENLPQDMLVEILSRVGSYSSDQLFMCKSVCKSFSK
                     LSKDLLVLKRLSLDRWPLLLWGNPRFFVFLFRCTIFGNPNAIFRWGLIGYFDGRHIDY
                     GLECLKQASNSQLKEAVYVYGLIMFASCKIEEKHVGLQILNETFPPELEMVAAVRTRV
                     FDLLRCLWLFNRRPFADVATSCPISDHRGYFPHIHGFELTIPECMSCFWAYELGVFVN
                     RFAYN"
     misc_feature    28..144
                     /gene="LOC139842582"
                     /note="F-box domain superfamily; Region: F-box_SF;
                     cl45894"
                     /db_xref="CDD:459239"
     misc_feature    order(34..39,43..51,58..63,70..72,112..120,124..126,
                     133..135)
                     /gene="LOC139842582"
                     /note="F-box motif; other site"
                     /db_xref="CDD:438928"
     misc_feature    order(34..36,46..48,55..60,67..72,82..84,97..102,112..120,
                     124..126)
                     /gene="LOC139842582"
                     /note="Skp1 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438928"
ORIGIN      
        1 atggaagtta ctcaaccgaa gacgatcgaa aatcttccac aagatatgct tgtggaaatt
       61 ttatctcgag ttggaagtta ctcatccgac cagttgttca tgtgtaagtc ggtttgcaaa
      121 agcttttcga agctttccaa agatctttta gtattaaaaa ggctttccct agatcggtgg
      181 cctctattac tttggggaaa ccctagattc tttgtttttt tatttcgttg tacgattttt
      241 ggaaacccta atgcgatatt tcgctggggt ttgataggtt attttgacgg tagacatatc
      301 gattatgggc ttgaatgtct caagcaagct tcgaacagcc aacttaaaga ggctgtttat
      361 gtttatggtt taataatgtt tgcctcttgc aaaatagagg aaaagcatgt cggtttacaa
      421 attttgaatg aaacattccc accagagctg gagatggtgg ctgcggtgag aacaagggtt
      481 tttgatttgc tgcgatgttt atggttattt aaccgccgtc cttttgctga cgtggcaacg
      541 tcgtgcccta tctctgacca ccgtggttat tttccacaca tccatgggtt tgaactcacg
      601 ataccggaat gcatgtcgtg tttttgggcc tatgagttgg gtgtttttgt aaaccgattt
      661 gcatataact ag
//
LOCUS       XM_071832703            1396 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides SH3 domain-containing
            protein 2-like (LOC139842583), mRNA.
ACCESSION   XM_071832703
VERSION     XM_071832703.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1396
                     /gene="LOC139842583"
                     /note="SH3 domain-containing protein 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139842583"
     CDS             1..1179
                     /gene="LOC139842583"
                     /codon_start=1
                     /product="SH3 domain-containing protein 2-like"
                     /protein_id="XP_071688804.1"
                     /db_xref="GeneID:139842583"
                     /translation="MGFRLKGIHFLHKCMQHMAKGEHKISEYSHQNFSARSNLKQMNI
                     NKNIWSERLRKRTGLLIHTVVNQFANGAYGGSDDVSNIETDVLLHEKLERLYKSTRVV
                     KHFQRDIVRGVEGYIVSGSKQVEIGIKLSDDSRKYGVENSCTLSKAALKFSYALAELE
                     KELGVLLKSFGTQVAEPLRTMVMGAPLDDARHLAQSYDRMRQQAESQAVEVSKIQERM
                     RDESGNTDQLMKLETAESKLQNLNSDMLTLGKQATSAMAAVEAQQQKMTLDRLLTMIK
                     SERDYHQKVFQILDLLKEKMVSERVDATPCYKDIKNMPKSPIQNGSDDGAEYFIGEVM
                     YSHYGESKVELSLSIGDYVVIRKVSSNGWAEGECKGKAGWFLAGYIERRQHVLASKVF
                     "
     misc_feature    268..876
                     /gene="LOC139842583"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; Region: BAR; cl12013"
                     /db_xref="CDD:472257"
     misc_feature    order(292..294,301..306,316..318,322..327,334..339,
                     343..348,376..381,385..390,397..402,406..411,418..420,
                     454..456,463..468,769..771,778..783,787..789,802..804,
                     811..816,820..825,832..837,844..849,853..858,865..870,
                     874..876)
                     /gene="LOC139842583"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:153271"
     misc_feature    988..1143
                     /gene="LOC139842583"
                     /note="Src Homology 3 domain superfamily; Region: SH3;
                     cl17036"
                     /db_xref="CDD:473055"
     misc_feature    order(1003..1005,1009..1011,1018..1020,1030..1032,
                     1084..1089,1126..1128,1132..1137)
                     /gene="LOC139842583"
                     /note="peptide ligand binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:212690"
ORIGIN      
        1 atgggattta gactcaaagg cattcatttt ctacacaaat gtatgcagca tatggcaaag
       61 ggggaacaca aaattagtga gtattcacac caaaatttca gtgcaaggtc taatctaaaa
      121 cagatgaata taaataaaaa catttggtca gaaagattaa gaaaaaggac gggtttgttg
      181 attcatacgg tggtcaatca gtttgctaat ggtgcttatg gaggttcaga tgatgtttct
      241 aatatagaaa cagatgtgct gcttcatgag aaactcgaga ggctgtacaa atctacacgt
      301 gttgtgaagc attttcaaag ggatattgtt cgtggtgtag aaggatatat agtttctggt
      361 tccaaacaag ttgaaatagg aattaaattg tcagacgaca gtagaaaata tggcgtcgag
      421 aattcatgca cattatccaa agctgcacta aaattttcat acgccctcgc tgaattggaa
      481 aaagaactcg gagttctact aaagtctttt gggacacagg ttgcagagcc attaagaaca
      541 atggtaatgg gagctccact tgatgatgct cgacatctcg ctcaatctta cgacaggatg
      601 cgccaacagg cggagtcaca ggctgttgaa gtatctaaaa tacaagaaag aatgagagac
      661 gaaagtggaa atacggacca attaatgaaa cttgaaactg cagaatcaaa attgcaaaat
      721 ttaaattccg atatgttaac actgggaaag caagctacat cagcaatggc tgcagttgaa
      781 gctcaacaac aaaaaatgac acttgataga ttattaacaa tgatcaaatc agaacgtgat
      841 taccaccaga aggtttttca gattcttgat cttcttaaag agaagatggt atccgaacga
      901 gttgacgcaa cgccgtgtta caaagacatt aaaaacatgc ccaaatctcc tattcagaat
      961 ggttcagatg atggtgctga gtactttata ggggaggtga tgtattcaca ttatggcgag
     1021 tctaaagtgg aactaagttt atcaattggt gattatgttg tcattagaaa ggtttctagt
     1081 aatggttggg ctgaagggga atgcaaaggg aaagcaggtt ggtttcttgc tggctatatt
     1141 gaaagacgac aacatgttct tgcaagcaaa gtcttctaac gggtaaacgg gtaagatttc
     1201 tgcgtgatca tttcactttt aatctgttga gttttggtct tatgtgtttc tgttcattta
     1261 tatctttacg catttttgca tttttcatgt ttttggtctt attttatggt atttttgtgt
     1321 acattcacta ccttgatgtt acaatgtaca ttctcttcca tagaaatttt acaacttgtt
     1381 agcaaattat atacat
//
LOCUS       XM_071832704             414 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842585), mRNA.
ACCESSION   XM_071832704
VERSION     XM_071832704.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..414
                     /gene="LOC139842585"
                     /note="uncharacterized LOC139842585; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842585"
     CDS             1..414
                     /gene="LOC139842585"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688805.1"
                     /db_xref="GeneID:139842585"
                     /translation="MKHSGWVDELPKILWVHRTTHKNSTGETPFSLVYSSEAVIPAEI
                     TVPTERILSYSKGENDERLLTNLNYTEERREMAAIREAANKQRIAKYYEKRVRARTYK
                     VGDLVWRDNQASRAQNTGKLGPIWEGPYRVVGISN"
ORIGIN      
        1 atgaagcaca gcggatgggt agatgagtta cccaaaatcc tatgggtgca cagaacgacg
       61 cacaagaaca gtacaggaga gacaccattc agtttggtgt acagttcaga ggcggttatc
      121 ccagcggaga taacagttcc aacagaaaga attttgtcat acagcaaagg cgagaacgac
      181 gaaagattgc tcactaacct gaactacaca gaggagcgca gagaaatggc ggccatcaga
      241 gaagccgcca acaagcagcg cattgcaaag tattacgaaa aacgcgtaag ggcaagaacg
      301 tacaaggtgg gagaccttgt gtggcgcgac aaccaagcaa gcagggccca aaacactgga
      361 aagttagggc caatctggga aggaccttac agggtcgtgg ggatcagtaa ctga
//
LOCUS       XM_071832705            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842586), mRNA.
ACCESSION   XM_071832705
VERSION     XM_071832705.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139842586"
                     /note="uncharacterized LOC139842586; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842586"
     CDS             1..1077
                     /gene="LOC139842586"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688806.1"
                     /db_xref="GeneID:139842586"
                     /translation="MKALLKDLPTLTAPITGKTLILYLAVSKEAVSSVLVAERGEDQM
                     PIYFVCKALSGSELNYRPIEKLMYVLVVTARRLRRYFQAHPITVLTDQLIRQPLYKPE
                     ISGRLTKWAIKLGEHEILYCARRAIKGQVMADYLAEIAADMPAIDHPEQLPAPPLELW
                     ELYTDGAASSEGAGAGLILTGPHQEEHTYALRFNFKVTNNEAKYEALLAGMRIARELG
                     IKKLQAYMDSQLVSNKINNTFDANDKSMQSYLALVHSLADTFVDFRISQIPRSQNKQE
                     DVLSKLAALTFNHLEKKILVEQNFTKSTVPGTTIASVEEEKATWMTDIIEFLRTGSLP
                     EGEKEAMKIRVKTPNYELRGEILY"
     misc_feature    49..348
                     /gene="LOC139842586"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    478..852
                     /gene="LOC139842586"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(493..504,592..600,607..609,679..681,799..801,
                     841..843)
                     /gene="LOC139842586"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgaaggcac tcctcaaaga cctcccgacg ttaacagcgc cgattaccgg caaaaccctg
       61 atactttatc ttgcggtatc taaggaggct gttagctccg ttttagttgc cgaacgaggg
      121 gaagaccaaa tgccaattta cttcgtctgc aaagcgctat caggaagtga actgaattat
      181 cgccccatag aaaaacttat gtatgtactc gtcgttaccg ctcgacgtct gcgcaggtac
      241 ttccaagcac atccaataac ggtgctcacc gatcaactaa ttcgacagcc actatacaag
      301 cccgagatat caggtaggct aaccaaatgg gctataaagc taggtgagca tgaaatcttg
      361 tactgcgcta gaagagctat caaggggcag gtgatggccg attatttagc cgaaatagcc
      421 gctgatatgc cggcaattga tcaccctgaa cagcttcccg cgccaccgct cgaactgtgg
      481 gagctctata ccgacggcgc ggcgagctct gaaggcgccg gcgcggggtt aatccttaca
      541 ggtccacatc aggaagagca tacatacgcg ttacgattca actttaaggt gacaaacaac
      601 gaggcaaaat atgaggcgtt attagcagga atgcgcatag ctcgagagct aggaataaag
      661 aaactacaag cttacatgga ctcacagcta gtctccaata agataaacaa cacctttgac
      721 gccaatgaca agtccatgca atcgtacctg gctctggttc attcactagc cgacacgttt
      781 gtcgacttca gaatcagcca aattcccagg agccagaaca agcaggaaga tgtactcagt
      841 aaactggctg ccctcacctt caatcaccta gaaaagaaaa tattagtaga gcaaaacttc
      901 acgaagtcta cagtgcccgg aacaacgatc gcatctgttg aagaagaaaa agcgacttgg
      961 atgacagata tcatagaatt cctgcgaacc ggatctttac ccgagggaga gaaggaagcg
     1021 atgaagatta gggtgaagac accaaactac gagttgcgag gggaaatttt atattga
//
LOCUS       XM_071832708            1242 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842587), mRNA.
ACCESSION   XM_071832708
VERSION     XM_071832708.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1242
                     /gene="LOC139842587"
                     /note="uncharacterized LOC139842587; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842587"
     CDS             1..1242
                     /gene="LOC139842587"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688809.1"
                     /db_xref="GeneID:139842587"
                     /translation="MANCLPQQGTKHKPSAAGGSTMIEISFPSIQAFNTSCAPIVVQG
                     YLPESGHGVKHFHIDNGSSVDIMYEHCFRQLPTTVRRTIKPPTTSLSEFSEESAWPIE
                     ILDLKLELRDSRDKSKKCTKSIEFCIIRSYSRYNAILGRTSIQKFGAIPSTIHGMVRF
                     LTDQGIATLELTPLDTLCTSVNDKGSATPEERGANEWWVIVNPEYPEQNVKIGGSLTQ
                     ETKEKLRNILVANSDVFCWRDADMTGTWVANHVLVAKSNGTWRLCIDFKDINKACPKD
                     NYPLPEIDWKVESLAGFWFKCFLDAYKGYHQIQMAEEDEEKTAFHTDQGIYYRCNLEA
                     YVDDLVIKSNTEEQLLADILETFNMLRSINMKLKPAKCSSGEEEGNFLGHIVTPRGIK
                     ANPKKIEAIEKKPSPKTKKQF"
     misc_feature    751..1158
                     /gene="LOC139842587"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
     misc_feature    order(898..915,1003..1005,1009..1014,1144..1149)
                     /gene="LOC139842587"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     misc_feature    order(898..915,1009..1011)
                     /gene="LOC139842587"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238825"
ORIGIN      
        1 atggccaact gcctaccgca gcaaggaacg aagcacaaac ctagcgctgc cggaggctcg
       61 acgatgatag agatatcatt tccctccata caggcgttca acacttcctg tgcaccaatt
      121 gtagtgcagg gatatcttcc agagtcagga cacggcgtca agcactttca catagacaac
      181 ggcagtagtg tcgatatcat gtacgagcat tgcttccgac agctacccac aacagtgagg
      241 cgaaccatta aacctccgac tacgtccttg tctgaatttt ctgaagagtc agcgtggccc
      301 atcgaaatct tggatttgaa gctagagctg agagacagca gagataaatc aaagaagtgc
      361 accaagagca tagagttctg cattatacgc tcgtactcta ggtacaacgc tatactcgga
      421 aggacttcca ttcagaaatt tggcgctata ccatccacca ttcatgggat ggtccgattc
      481 ctgacagatc aaggaatcgc cacactcgag ttaacgccac tggacacttt gtgcacttct
      541 gttaatgata agggtagcgc tactcccgaa gaaaggggcg caaatgaatg gtgggttata
      601 gttaatcccg agtatccaga gcagaatgta aaaatagggg gaagcctcac acaggagact
      661 aaggaaaagc tgaggaatat cctcgtcgct aactctgatg tgttttgttg gcgcgatgct
      721 gacatgactg gaacatgggt ggccaatcat gtgctggtag ccaagtcaaa tggaacgtgg
      781 cgactttgta ttgatttcaa agacatcaac aaagcttgcc ccaaagataa ctatcctttg
      841 ccagaaattg actggaaagt agagtcgctt gctggttttt ggttcaagtg cttcctagat
      901 gcctacaaag gatatcacca gatacaaatg gcggaagagg atgaagagaa aaccgcgttc
      961 cacacggacc aagggattta ctataggtgc aaccttgagg cgtatgttga cgacctcgtc
     1021 attaagagca ataccgagga acaattattg gccgatatac tcgaaacgtt taacatgctc
     1081 cgaagcatca acatgaaact caagccggcc aagtgcagct ctggagaaga ggaagggaat
     1141 tttttgggac acattgtgac tccgcgtgga atcaaggcta acccaaaaaa gatcgaagcc
     1201 attgaaaaaa agccttcccc aaaaacaaaa aagcaatttt aa
//
LOCUS       XM_071832709             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            MYB15-like (LOC139842588), mRNA.
ACCESSION   XM_071832709
VERSION     XM_071832709.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139842588"
                     /note="transcription factor MYB15-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139842588"
     CDS             1..783
                     /gene="LOC139842588"
                     /codon_start=1
                     /product="transcription factor MYB15-like"
                     /protein_id="XP_071688810.1"
                     /db_xref="GeneID:139842588"
                     /translation="MVRAPYIDKNGTKKGAWSEDEDCKLKAYIETYGHRNWRELPKLA
                     GLSRCGKSCRLRWVNYLRPNVKRGNFTKDEEDLIIKLHKDLGRKWAVIATKLPGRSDN
                     EIKNHWHTHLRKRAQHNYSYPQKESSQNHESDEEKSHVIKLSNLKEKDEAEILLAMLS
                     STTQSTEANVKQASTSGTSDSYGEAVNSEYSSLLSSNNDSFNDFWTQPFLPDTYSNAH
                     DDYYKSSIDLHNQNCFSYYDHDDGFIMVDDFLWSSMEFSGFL"
     misc_feature    13..>414
                     /gene="LOC139842588"
                     /note="Transcription repressor MYB5; Provisional; Region:
                     PLN03212"
                     /db_xref="CDD:178751"
ORIGIN      
        1 atggtgaggg caccttatat agacaaaaat ggaactaaaa agggtgcgtg gagtgaagac
       61 gaagattgta aattgaaagc ttatatagag acatacggcc atagaaactg gcgtgaactt
      121 ccgaagttag ccgggttatc aagatgtggt aagagttgta gacttagatg ggtgaattat
      181 cttcgcccaa atgtgaaacg cggaaacttc actaaagatg aagaagatct tataatcaaa
      241 ttacataaag atcttgggcg caagtgggca gtgattgcta caaaattacc aggacgaagc
      301 gacaacgaga taaagaatca ttggcacacg cacttgcgga aacgagctca acacaattac
      361 tcatatccac aaaaggaaag ttctcaaaat catgaaagcg acgaagaaaa aagtcatgtc
      421 ataaaacttt ctaatttgaa agaaaaagat gaagctgaaa tcttactagc aatgctatct
      481 tcaacaacac aatctacaga ggcaaacgtt aaacaagcgt caacttcagg aaccagtgac
      541 tcatatggtg aagctgtgaa tagtgaatat tcctcactgt tgtcatctaa caatgattca
      601 tttaatgact tctggacgca accattcttg ccagacactt acagtaatgc tcacgatgat
      661 tattataagt cttctatcga tttacataac caaaattgtt tttcatatta cgatcatgat
      721 gatggtttta tcatggttga cgatttttta tggtcatcga tggagttttc tggtttttta
      781 tga
//
LOCUS       XM_071832710             948 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842590), mRNA.
ACCESSION   XM_071832710
VERSION     XM_071832710.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..948
                     /gene="LOC139842590"
                     /note="uncharacterized LOC139842590; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842590"
     CDS             1..948
                     /gene="LOC139842590"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688811.1"
                     /db_xref="GeneID:139842590"
                     /translation="MDIKWDTILKSYGKGGLNVESLKAKNISLLCKWWWRFKSENNAL
                     WVNVIKSIYGRDGVLGSFTNGSLVKHRSVWWNIIKIRKDLLNLGIDVDDFFERKMGDG
                     RDILFWENIWVRDSNLKQDFPRLFRLEVDNLMSVNERVIMDSGKFHCTWKQKRQLTGR
                     LNGELQKLEDRVKSIESLREGDSKWVFKPSGKVVYSSRVIASIFDDLFLEGNSNEPET
                     LRNNFLPLKLGIFVWRAIKNRLPTRVELEKRGVAIDTSSCPLCGTLGFSITIDVILEI
                     VDLSSDKGIDIHEMLGAEFCVLVAEKEAERRSSTTRRKR"
     misc_feature    583..>786
                     /gene="LOC139842590"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggacatta aatgggacac tattcttaaa tcatatggga agggtgggct aaacgtggag
       61 tctcttaaag caaaaaacat ttctctttta tgtaaatggt ggtggcggtt caaaagtgaa
      121 aataatgctc tttgggttaa tgtgattaag agtatatatg ggcgggatgg cgttttaggg
      181 tcgtttacta atggttctct tgtcaagcat cgttcagtgt ggtggaacat catcaaaatc
      241 cgaaaagatc tgctgaattt gggcatcgat gtggatgatt tctttgagcg gaaaatgggg
      301 gacggaaggg acattctatt ttgggagaat atttgggtta gggattcaaa tctcaagcag
      361 gattttccta gactctttcg tttagaagtc gacaatttga tgtccgttaa tgaaagggtt
      421 ataatggaca gcggtaagtt tcattgtaca tggaaacaga aaaggcaact tacgggacgt
      481 cttaatgggg agctgcagaa actcgaggat agagttaagt cgatcgagag tctaagggag
      541 ggagatagta aatgggtttt caaaccaagt ggcaaagtag tctactcatc tagagtgatt
      601 gcttcgattt tcgacgacct atttctagaa ggtaactcaa acgagcccga aactttacga
      661 aacaatttcc ttcccctaaa acttgggatt ttcgtgtgga gggctattaa aaatcggttg
      721 ccaactagag tagagttaga gaaacgaggc gtcgctatcg atacttcttc ttgcccctta
      781 tgtggtacat tgggattcag tatcaccatt gatgtgattt tggagattgt tgacttaagc
      841 tccgataagg gtattgatat acatgagatg cttggtgctg agttttgtgt tttggttgct
      901 gaaaaagaag ctgaacgaag aagctcgact actcgaagga aacgatag
//
LOCUS       XM_071832711             741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842591), mRNA.
ACCESSION   XM_071832711
VERSION     XM_071832711.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..741
                     /gene="LOC139842591"
                     /note="uncharacterized LOC139842591; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842591"
     CDS             1..741
                     /gene="LOC139842591"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688812.1"
                     /db_xref="GeneID:139842591"
                     /translation="MSWKRKHWIATVMRYLPSNIVILIVNVYAPHQENKKKVVWTQLA
                     NIALKWPGPICVLGDFNSVCCPGEILREMIDATSITNFNNFIAIASLIDQPLTNDEFT
                     WEGPLGKFSRIDRVLANHAWVSRCPEAILQTVHSNSLDHKPIVWAKNFPIGDPNHFGS
                     TIYGLTRKVFLEFCEARWTGYEVEGWAAFTLNKKLRLLKSDLRAWNVSQRDNDEFDLN
                     NCLRDIKNLKEYLKTRNLTEQEIAELRS"
     misc_feature    <52..435
                     /gene="LOC139842591"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(82..84,181..183,421..423)
                     /gene="LOC139842591"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtcgtgga agaggaaaca ttggatcgcc accgtaatga ggtatcttcc ttctaatatt
       61 gttatcctta tcgtcaatgt ttatgcacct catcaagaaa ataagaagaa ggtcgtttgg
      121 acacaattag ccaatattgc ccttaaatgg cctggaccga tatgtgttct tggcgacttt
      181 aattcggttt gttgcccggg tgaaatatta agagaaatga ttgatgcgac aagtataaca
      241 aactttaata attttattgc tatagcttct ttgatcgacc aacctttgac taacgacgaa
      301 tttacttggg agggccccct tgggaaattc tctcgtatcg atagggtgtt ggctaatcat
      361 gcgtgggtta gccgttgtcc tgaagcaatt ttacaaactg ttcactccaa tagccttgac
      421 cataaaccca tcgtttgggc caaaaacttt ccaattgggg acccaaacca tttcggttca
      481 acaatttatg gcttaacaag aaaggttttt ttagaatttt gtgaagctag atggacaggg
      541 tatgaggttg agggttgggc agcctttacc ctcaacaaaa aattacgcct gctcaaatcc
      601 gatttaagag catggaatgt tagccaaaga gataatgatg aatttgatct taacaattgt
      661 ttacgagata tcaaaaatct caaggaatat ctcaaaactc gtaatcttac cgaacaagaa
      721 attgccgaat taagatcata a
//
LOCUS       XM_071832712             991 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides syntaxin-125-like
            (LOC139842592), mRNA.
ACCESSION   XM_071832712
VERSION     XM_071832712.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..991
                     /gene="LOC139842592"
                     /note="syntaxin-125-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139842592"
     CDS             89..991
                     /gene="LOC139842592"
                     /codon_start=1
                     /product="syntaxin-125-like"
                     /protein_id="XP_071688813.1"
                     /db_xref="GeneID:139842592"
                     /translation="MNDLFSNSFKKYQDEKDIEAGGGAGNDPIDLDKFFADVENVKED
                     MAGVEKLYKKLQESNEESKTVHNAKTMKQLRAKMDSDVEQVLKRVKVIKGKLVALDKS
                     NVEHRKVPGCGPGSSADRTRTSVVSGLGKKLKTMMDDFQALRARMNEEYKETVGRRYF
                     TITGEKANDELIENLISSGEGEDFMQKAIQDQGRGQIMDTISEIQERHDAVKDIEKNL
                     IELHQIFLDMAALVEAQGQQLNDIESNVAHASSFVHRGTEQLVEARELQKSSRKCTCI
                     AIALVLVLIIVALYPVWFPMLMRS"
     misc_feature    185..796
                     /gene="LOC139842592"
                     /note="Region: Syntaxin; pfam00804"
                     /db_xref="CDD:459942"
     misc_feature    698..898
                     /gene="LOC139842592"
                     /note="SNARE motif; Region: SNARE; cl22856"
                     /db_xref="CDD:473982"
     misc_feature    order(782..784,803..805,812..814)
                     /gene="LOC139842592"
                     /note="flanking leucine-zipper layers; other site"
                     /db_xref="CDD:277192"
     misc_feature    791..793
                     /gene="LOC139842592"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
ORIGIN      
        1 ttaatcttaa atcccattta aataattatc ctttgagtta ttgaaacttg attttagatt
       61 taaataaata aataaaaagc cagccaagat gaatgatcta ttttctaatt ctttcaagaa
      121 atatcaagat gagaaagaca tcgaggctgg tggtggcgct ggcaatgatc caatcgatct
      181 tgataaattc ttcgcagacg tggagaatgt aaaagaagat atggcagggg tcgaaaaatt
      241 gtataaaaag ctacaagaat caaacgagga aagtaaaacg gttcataatg ccaaaacaat
      301 gaaacaactt cgcgccaaaa tggactcgga cgtagagcaa gtattgaaac gcgtcaaggt
      361 cattaaggga aagcttgtag cccttgacaa gtcaaatgtg gaacatcgaa aagtccctgg
      421 ttgtgggccc ggctcatcag ccgataggac gcgaacatct gttgttagtg gtttaggcaa
      481 gaagcttaag accatgatgg atgactttca agcgttgcga gctagaatga atgaagagta
      541 caaagagacc gttggaagaa gatactttac aataacgggt gaaaaagcaa acgacgaatt
      601 aattgaaaat ttaatatcga gtggcgaagg tgaggatttt atgcaaaaag ctatccaaga
      661 tcaaggtcgg ggacaaataa tggacacgat atcggaaatt caagaaagac atgatgcggt
      721 gaaagatata gaaaaaaact tgatagaatt acaccaaata tttttggaca tggctgcgtt
      781 agttgaagcg caagggcaac aactgaatga tattgagagc aatgtagcgc acgcgagttc
      841 atttgttcat cgtgggaccg agcagttagt tgaagcaagg gagttgcaaa agagctcaag
      901 gaaatgtact tgcattgcca ttgcgcttgt tcttgtgtta attatcgttg cgctttaccc
      961 tgtttggttc cccatgttaa tgcgctctta a
//
LOCUS       XM_071832713            2514 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842594), mRNA.
ACCESSION   XM_071832713
VERSION     XM_071832713.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2514
                     /gene="LOC139842594"
                     /note="uncharacterized LOC139842594; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139842594"
     CDS             1..2514
                     /gene="LOC139842594"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688814.1"
                     /db_xref="GeneID:139842594"
                     /translation="MDRERQGESEVSRPSLADLEYPSLTLGEAQSLEAPFSESEILDA
                     INDCGSDKAPGPDGFNLRFFKKFWGTIKDDVISAIQWFWDKGELSRGCNSSFVTLIPK
                     KCEPLTLSDYRPISLIGSFYKILAKILSNRLKKVIPRLIGSEQSAFLKERYILDGVLV
                     ANESLCFMKSNKKKGIIFKADFEKVFDSLNWDFLMEVMGCMRFGSKWCKWISSCLSSA
                     KISILVNGSPTREFTIGRGVRQGDSLSPFLFILAAEGLNILTKATVDRGLFKGVEIGN
                     DKILVSHLQFADDTMFFGDWSSANARNLLNILKCFELSYGLKVNFRKSCLYGVGVDHN
                     EVVRLANRMGCQAGKLPFIYLGLPIGAILNSLPLYYFALFRAPTCVLKILESVRRSFF
                     WGGDNSGSKINWVKWEHTCSSYREGGLNIGSLKAKNLALLGKWWWKFKTETDCLWSKV
                     IRSIYGIDGCLGSDSGLAHRSTSSTWYNIICAGNYIEELQVPFKSSFTKSVGNGDSTS
                     FWNEVWCGSDSFRNNFPRLFRLESNKDALISERISPLEEHVANQNVVATVVSSAPSHS
                     GRGVATVAAGPNQPVAPSVATRSGLSASTFQFHWVWVRAPSGRTGGELIDLTNLLRSI
                     SLDFSVRDSWKWSLSSNGLFEVKKLSSLIDAKLLNYGNDISCESLRNNLVPKKVEVFV
                     WRALLKRIPVRVELDKRGIDLHSVRCPVCNDDMESVDHFLYRCKFTVDIWTRIFKWWN
                     FENLSNLNGSNYLRGISSRSMSSFGKYLWQAVEWACVYLLWKNRNATVFNNKISIAPV
                     LLNDIQIKSFEWISGPLKGKDTSIDWLNWLSNPHVFLHR"
     misc_feature    283..1077
                     /gene="LOC139842594"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(541..558,718..723,856..858,862..867,1063..1068)
                     /gene="LOC139842594"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(541..558,718..720,862..864)
                     /gene="LOC139842594"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    721..723
                     /gene="LOC139842594"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <2011..2193
                     /gene="LOC139842594"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggatcgag aaagacaagg tgaaagcgag gtttctagac ctagtcttgc ggatcttgaa
       61 tatccatctc taacgctcgg tgaagctcaa agtttagaag ctccctttag tgaatcggaa
      121 atcttagatg ctatcaacga ctgtggtagt gataaagctc cgggtccgga tgggtttaac
      181 cttagattct tcaagaaatt ttggggtacc atcaaagatg atgtcattag tgctattcaa
      241 tggttttggg ataagggaga gttgtctcgg ggttgtaatt cttcattcgt tacgttgatc
      301 ccaaaaaagt gtgaaccgct tactcttagc gattaccgac ctattagcct tatcggaagc
      361 ttttataaaa ttctagcaaa aattctttcc aatagactta agaaagttat cccaaggcta
      421 attggttcgg aacaaagtgc gttcttgaaa gaacgatata tcctagatgg agtattagtg
      481 gcaaatgaat ctctttgttt catgaaatcg aataagaaaa aaggaatcat cttcaaagcc
      541 gacttcgaaa aggtttttga tagccttaat tgggactttc tcatggaagt catgggttgt
      601 atgagatttg gttcaaaatg gtgtaaatgg atctcttctt gcttatcttc ggctaaaata
      661 tcaatcctcg ttaatggctc tcccactcgg gaattcacca ttggccgagg tgtccgacaa
      721 ggtgactctc tctcaccttt tctttttatc ttagccgcgg aaggacttaa tattctcaca
      781 aaagcaacgg ttgatcgagg tctttttaag ggagtagaga ttggaaacga taagattttg
      841 gtatcccact tgcaatttgc ggatgatacg atgtttttcg gtgattggtc tagcgctaac
      901 gcccgcaatc tccttaatat attaaaatgt ttcgaattat catatggttt gaaagtaaat
      961 tttcggaaaa gttgtcttta tggtgtgggt gtggatcata acgaagttgt taggttagcc
     1021 aatcgtatgg gttgtcaagc cggtaaactc ccctttattt atcttggttt gcctattggt
     1081 gctattctta atagccttcc tttgtattac tttgcgcttt ttcgggctcc tacttgtgtg
     1141 ctaaaaatat tagagagtgt gagacgttct tttttttggg gaggggacaa ttcgggttct
     1201 aaaattaatt gggttaaatg ggaacacact tgttcttcat atcgggaggg ggggttgaat
     1261 attggctcat taaaagccaa aaacttggca ctcttgggca agtggtggtg gaagtttaaa
     1321 accgaaaccg actgcttgtg gtcaaaagtg attcgtagta tctatggaat tgacggttgt
     1381 ttggggtcgg atagtgggct tgctcaccgt tcaacttcaa gtacttggta taacatcatt
     1441 tgtgcaggaa attatattga agagttacaa gtcccgttta aaagttcgtt cacaaaatcg
     1501 gttggtaatg gtgattctac ttcgttttgg aatgaagtgt ggtgcggttc ggattctttc
     1561 agaaataact ttcctagatt attcaggttg gagtctaaca aggatgcttt gatcagtgag
     1621 cggattagtc ccctggaaga acatgttgca aatcaaaatg ttgtcgctac tgtagtttcc
     1681 tcggctcctt cacattctgg acgcggtgtt gctactgttg ctgcaggtcc taaccagccg
     1741 gttgccccat ctgttgctac gcggtctggc ctatctgcta gtacgtttca gtttcattgg
     1801 gtatgggtgc gtgccccatc tgggcgtaca gggggggagt tgatcgattt aactaatctt
     1861 cttcgtagca tctccttgga ttttagtgtt cgtgactcgt ggaaatggtc cctgtcttct
     1921 aatggtttgt tcgaagtcaa aaaattatct tctcttattg atgcgaagct tttaaattat
     1981 ggaaatgata tttcatgtga atctttgaga aataatcttg tccctaaaaa agtcgaagtc
     2041 tttgtttgga gagctttatt gaagagaatt ccggtccgtg ttgaattaga taaaaggggt
     2101 attgaccttc atagtgttcg ttgtccagtt tgtaatgatg atatggagtc ggtggatcat
     2161 tttctatata ggtgcaaatt cacagttgat atatggactc gtatctttaa gtggtggaat
     2221 tttgaaaacc tctcaaattt aaacggaagc aattatctcc gaggtatatc ttcgcgttcc
     2281 atgtcttctt tcggaaagta tctttggcaa gctgtggagt gggcttgtgt ttatcttttg
     2341 tggaagaatc gtaatgctac ggtgttcaat aacaaaataa gcattgctcc ggtacttctg
     2401 aatgatattc aaatcaaatc atttgagtgg atttcgggtc ctctaaaagg aaaagataca
     2461 agtatcgatt ggttgaattg gctttcgaat ccccatgttt ttcttcatag ataa
//
LOCUS       XM_071832714             927 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842595), mRNA.
ACCESSION   XM_071832714
VERSION     XM_071832714.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..927
                     /gene="LOC139842595"
                     /note="uncharacterized LOC139842595; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842595"
     CDS             1..927
                     /gene="LOC139842595"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688815.1"
                     /db_xref="GeneID:139842595"
                     /translation="MIIKTGIHLEEQGVGFKKSFKKELGNGKDTLFWLDVWYEDIPFK
                     DRFKRLFRLESDPNASVHKRLGWDGISNLGSWEWVNHPRGRTGSEFDELRQIIRGMVN
                     NNEKKDRWVWALTSNGNFSTKVLANLVRSKIINSRASGFETMRNNLVPKKVEVFVWRA
                     MNGRLPVLSELDKRGVDLHSVRCPICDNDIETVQHALFKCNISNEVWKRISKWFDLSH
                     GFLDQNNCFKGLSSFQMTEVGFKIWQAVEWTCGYIIWKNRNKKVFKNICWNPPMALNE
                     IQTKSYEWIAKRCKLISIEWNTWLVNPKRLIC"
     misc_feature    358..618
                     /gene="LOC139842595"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgattatta agacagggat acatctcgag gagcaaggag tcggtttcaa gaagtcgttc
       61 aaaaaagagc tcggtaatgg caaagacacc ttgttttggt tggacgtgtg gtatgaggac
      121 attcctttca aggaccgttt taaaagattg tttcgtcttg agagcgaccc gaatgcttcg
      181 gttcacaagc gattgggttg ggatgggata tcgaatcttg gatcatggga atgggtgaat
      241 catcctagag gtagaacggg gtcggaattc gatgaattac gacaaataat acgtggtatg
      301 gtgaacaata atgagaagaa ggatcgatgg gtatgggctc ttacttcgaa tgggaatttt
      361 tcaacaaagg ttctagcgaa tttggtgcgg tcaaagatta tcaattcaag ggcttccggt
      421 tttgagacga tgcgtaataa tttggttcct aaaaaggttg aagtttttgt ttggagagca
      481 atgaatggta ggctccccgt attgtcggaa ctcgacaaaa ggggagttga ccttcactcc
      541 gttaggtgtc ctatttgtga taatgacatt gagacagttc aacatgcgct atttaaatgt
      601 aacataagca acgaggtttg gaagaggatt tccaagtggt tcgatttatc tcacggtttc
      661 ttggaccaaa acaattgttt caaaggtctt tcatcttttc aaatgacgga agtgggtttt
      721 aaaatttggc aagcggttga atggacgtgc gggtacatca tatggaaaaa tcgaaataaa
      781 aaggttttca agaacatatg ttggaacccc ccgatggcac ttaatgaaat tcaaacaaag
      841 agttatgaat ggattgcgaa aagatgcaaa ttaatatcga ttgagtggaa cacatggcta
      901 gtcaacccga agcgtcttat atgttaa
//
LOCUS       XM_071832716            1104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box/kelch-repeat protein
            At1g16250-like (LOC139842596), mRNA.
ACCESSION   XM_071832716
VERSION     XM_071832716.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1104
                     /gene="LOC139842596"
                     /note="F-box/kelch-repeat protein At1g16250-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139842596"
     CDS             1..1104
                     /gene="LOC139842596"
                     /codon_start=1
                     /product="F-box/kelch-repeat protein At1g16250-like"
                     /protein_id="XP_071688817.1"
                     /db_xref="GeneID:139842596"
                     /translation="MSSLASLSRQDEDSPQYCVYASFSAKSPSTETTNISNWIECYNP
                     LSNNWHRVTSIPGLLENHVLKGFSMVIMNDYIYIIGGLLCHNVTLEGDHDSNDGCQID
                     VEVLQSVRCYNITNDTWNKCAPLNIARYDFACTVSGNKIYIAGGKFKTDSVKGVSSSE
                     VYDPALDEWELLPKMSTLRYKCVGVTWQQRIYVVGGFTEYETNDIQGPFSMTNSSAEV
                     YDTINNKWDFLPRMWDLDVPPNQIVVAGGQLFSCGDCYIKWKGYIENFDRELNMWNAV
                     DGSSLSSPTSMLDFTSPKRPLMEQMYLTIAPIETRLYFLAGYKMNGETSKFRSEVHVF
                     DTSRDGGVWMNFEPVIEDGEKELSCHCAVYRKA"
     misc_feature    91..744
                     /gene="LOC139842596"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; Region: NanM; COG3055"
                     /db_xref="CDD:442289"
     misc_feature    196..375
                     /gene="LOC139842596"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    385..528
                     /gene="LOC139842596"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
     misc_feature    535..699
                     /gene="LOC139842596"
                     /note="KELCH repeat [structural motif]; Region: KELCH
                     repeat"
                     /db_xref="CDD:276965"
ORIGIN      
        1 atgagctcct tagcttcatt atcacgacaa gatgaagatt caccccaata ttgtgtttac
       61 gcctcgtttt cagccaaaag tccttcaact gaaacgacta acatatcaaa ctggatcgag
      121 tgctacaacc ctttatccaa taactggcat cgagttacat caataccagg attactcgaa
      181 aaccatgttt taaaaggctt ctcaatggtc attatgaatg actacattta tatcataggc
      241 ggtctccttt gtcataacgt gacacttgaa ggtgatcatg attctaatga cggatgccaa
      301 attgacgtag aagttttaca atccgtacga tgttataata tcacaaatga cacgtggaat
      361 aaatgtgcgc cacttaatat tgcacgttat gatttcgcgt gtacagttag tggaaacaag
      421 atttatatcg ctggtggaaa atttaaaact gatagtgtga aaggcgtttc atcgtctgaa
      481 gtctatgacc cggctcttga tgagtgggaa ttactaccca aaatgagcac gttgcgatat
      541 aaatgtgttg gtgtcacttg gcaacaacgg atttatgtcg tcggaggctt tactgaatat
      601 gaaactaatg atattcaagg accatttagt atgacaaata gttcagctga agtttatgat
      661 acaatcaaca ataaatggga ttttctaccg cgtatgtggg acctcgatgt cccgcctaat
      721 caaatagttg ttgcaggagg acaacttttc agttgcggcg attgttacat aaaatggaaa
      781 gggtatattg agaatttcga ccgagaactt aatatgtgga acgctgtcga tggctcatct
      841 ttgtcgtcgc caacttccat gctcgatttt acatcgccga agcggccact aatggaacaa
      901 atgtacctta caattgcacc aatcgagaca cgtttgtact ttctagctgg ttataaaatg
      961 aacggtgaaa cgtcaaagtt taggtctgaa gttcatgttt tcgacacatc aagagatgga
     1021 ggcgtttgga tgaatttcga gccagtgatc gaggatggcg agaaagagct ttcgtgtcat
     1081 tgtgcggttt acagaaaggc gtga
//
LOCUS       XM_071832717            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842597), mRNA.
ACCESSION   XM_071832717
VERSION     XM_071832717.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139842597"
                     /note="uncharacterized LOC139842597; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842597"
     CDS             1..1077
                     /gene="LOC139842597"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688818.1"
                     /db_xref="GeneID:139842597"
                     /translation="MGNNKHATKNVLGSILMDSFKAANREYKPKDIRDDVANRFRVSV
                     SYNQAWRAKCQAIEMLRGSSDDSFRMLPIYLHNLKIHNPGTITNLVTDKENKFVMCYM
                     SIGVVIRSFVQHVRPIIIVDAAHLKGGYLGTNLVAVAMDGNNGILPLAYGIGEGETNS
                     VWSWFFGNLRDHLMSYGMVDRMSEITFISDRAASIAHGIANMFPETFHAHCARHLFMN
                     IKTKSNKMKFFEWHFWKMVKAYRASDFHDHLDVFRRRLKASYKVLCEDGINRWSRSQS
                     THIRRKDARRTLRLLNKKAQRRKNHLAPASKYEAQGRKKDLASTAITGRRVARSDYTP
                     LRLQKYSYGPVHSLQHLQFYTQIT"
     misc_feature    352..654
                     /gene="LOC139842597"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgggaaaca ataaacatgc tactaaaaat gtgttgggta gtattcttat ggattcgttc
       61 aaggctgcta atcgagagta taaaccaaaa gatatacgtg atgatgtagc taatcggttt
      121 agagtgagtg tatcatacaa tcaagcatgg agggccaagt gtcaagcaat agagatgtta
      181 cgtggcagta gtgatgactc ctttagaatg cttcccattt accttcataa ccttaagatc
      241 cacaacccgg ggaccatcac caatttggtt accgataaag aaaataaatt tgtgatgtgt
      301 tacatgtcca ttggagtagt tattcgatca tttgtgcaac atgtccgccc gataatcatc
      361 gtcgatgctg cacatttaaa gggtgggtac ctgggtacta atttagttgc tgttgcgatg
      421 gatggcaata atggaatttt gccattggct tatggaattg gtgaaggcga gacaaacagt
      481 gtttggtcat ggttttttgg taacctaaga gatcatttaa tgagttatgg tatggttgat
      541 cgtatgtcag agattacttt tatttctgat cgtgctgctt caatagcaca cggcattgca
      601 aacatgtttc cggaaacgtt tcacgctcat tgtgcacgtc atttattcat gaacatcaaa
      661 actaaatcca acaagatgaa attcttcgaa tggcactttt ggaaaatggt taaggcgtac
      721 cgtgcgtcgg attttcatga tcatctggat gtatttcgaa ggagattgaa agcgtcttat
      781 aaagttctat gtgaggatgg tatcaataga tggtccagaa gtcaatctac tcatattagg
      841 cgcaaggacg caagaagaac cttgcgcctg cttaataaaa aggcgcaaag acgcaagaat
      901 caccttgcgc ctgcttctaa atacgaggcg caaggccgca agaaggacct tgcgtctacg
      961 gctattacgg gacgcagggt cgcaaggtct gattacacac ctttgcgcct tcaaaaatac
     1021 agttacggac ctgttcacag tttacaacat ttacagtttt atacacaaat tacataa
//
LOCUS       XM_071832718            2106 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842598), mRNA.
ACCESSION   XM_071832718
VERSION     XM_071832718.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2106
                     /gene="LOC139842598"
                     /note="uncharacterized LOC139842598; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842598"
     CDS             1..2106
                     /gene="LOC139842598"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688819.1"
                     /db_xref="GeneID:139842598"
                     /translation="MSQEQGYVEAKLTMKNMLNVIPQLKASMTENQQKNFRGTCFGPW
                     LDLSYTGNDPGLVHAMLQRKSERPIGIDEKYPADDEEIWFSFRPNFKIRFSRREFCLI
                     TGFKFSRRTDMAHYIPRSYNVETPPIRRRCFPNRKVNSNITITDIQKLLYDGADFVVS
                     DDDVVRLAIILIVERAFMGKQGIHVVSKKYLWLVEDFAKLNDYPWGNRIWDATYPVVK
                     DGFQARESQLEVGKGYTLVGFMWSFKIWILEAYRRTIKSFAHKTDKNGVPRALFWKRS
                     SAETFSVTDYLHLLNVMLSDDVARKVKRLRVSEAEEVVNLDTEEQGVVEEEPHPIVEE
                     DVVAPIVKKRKRSQKDWVNDEEIWSMVDRLVNDQGTLLPPPPNAWRDGRKHVGPAKDP
                     KSMVDSKQETRCMFIFQNENFIYLTPEFWIRLLGLGYSGYLENLHIDGWATLMLRYRQ
                     RVLPRASQYSTPIIPTDSFACSSRWTVMPLGFLSSLAAFQSYYDDTQREEEKRKEAEK
                     RGEVAITGENPPDYMYLIGLGDGSDELYPSWAYCDKILIPVHFYDAQHFILIVLNLEE
                     QKILVYDSLPGHVDQEIVKLTKDLGDQLPVYLRAIDYFNQKQDSQIVDYLENKESIEF
                     MTEAAPVVPVQGGINGDCGVWVCIHMERVIFGWDEIPNIGDPKKAAEDYRVRMAKTFF
                     RARFDTQEPPPKEKAKVGN"
     misc_feature    241..639
                     /gene="LOC139842598"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
     misc_feature    <1624..2037
                     /gene="LOC139842598"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 atgtcacaag aacagggata tgttgaggcg aagttgacga tgaagaatat gcttaatgtt
       61 atacctcaac taaaggcatc aatgactgag aatcaacaaa aaaattttag gggaacttgt
      121 tttggtcctt ggctagatct ttcttacacc ggcaatgatc cgggccttgt acatgcaatg
      181 ctccaaagaa agagtgagcg accgatagga atagatgaaa agtaccctgc tgatgatgag
      241 gaaatatggt ttagtttccg tccgaatttc aaaattagat ttagtaggcg ggaattttgt
      301 ctcatcacgg ggtttaagtt tagtcgtcgc acggacatgg cacattacat tcccagaagt
      361 tataatgtag aaacaccacc gattagacga cgttgtttcc caaatcgtaa agttaattca
      421 aacattacaa ttaccgatat ccaaaagctt ttatatgatg gtgctgattt tgtggttagt
      481 gatgatgatg tcgtgcgact agccattatt ttgattgtgg agagagcgtt tatgggtaag
      541 caagggattc atgtggtgag caaaaaatac ctatggctag tcgaagactt tgctaaattg
      601 aatgactacc cgtggggtaa tcgtatttgg gatgccactt accccgtagt taaagatgga
      661 tttcaagctc gggaaagtca gttagaggtg ggaaagggtt atactttggt cggttttatg
      721 tggtcattta agatttggat tctcgaggca tatcgacgaa caattaaaag ttttgcccac
      781 aagacagaca aaaatggagt accgagggcc ttattttgga aacgttcatc ggctgagact
      841 ttttcagtca ctgattacct gcatctacta aacgttatgc tgtcagatga tgttgctcgc
      901 aaagtgaaaa ggctgagggt gtctgaggct gaggaggttg ttaatctcga tactgaagaa
      961 cagggtgttg ttgaagaaga accccaccct attgttgaag aagatgttgt tgctccgatt
     1021 gtgaaaaagc gtaaacggtc gcaaaaggat tgggttaatg acgaggaaat ttggtcgatg
     1081 gtagacaggc tagtgaatga tcaaggaact ctactaccac caccacccaa tgcttggaga
     1141 gacggtagaa agcacgttgg gcctgcaaaa gatccgaaga gtatggtgga tagtaagcaa
     1201 gaaacgcggt gcatgttcat ttttcagaac gaaaatttta tatacctcac acctgagttt
     1261 tggatcaggt tacttggtct tggatattcc ggatacttgg aaaacttaca tattgatgga
     1321 tgggctacac ttatgttgag atatcgtcag agggttctcc cccgagcaag ccagtattcc
     1381 actcctatta tcccgaccga ctcgtttgcg tgtagttctc gatggactgt catgccattg
     1441 ggtttccttt ctagccttgc agcgtttcag tcctattatg atgatacaca aagggaggaa
     1501 gagaaacgga aagaagcgga gaaaagagga gaagtagcaa tcacagggga gaatccacct
     1561 gattatatgt atttgattgg attaggggat ggtagtgatg agctatatcc atcctgggcc
     1621 tattgtgata agattttgat ccccgttcac ttttacgatg ctcaacactt tattctgatt
     1681 gtgttgaact tggaggaaca gaagatattg gtgtacgata gtttgcccgg tcatgttgat
     1741 caagaaattg tcaagctcac caaagatctg ggagatcaat tgcctgtata cttaagagca
     1801 attgattact ttaaccaaaa gcaagactcc cagattgttg actacttgga aaacaaggag
     1861 agcatcgagt tcatgaccga ggcagcacca gtcgtgccgg tgcaaggtgg aattaatggg
     1921 gactgtggtg tttgggtctg catccatatg gagagggtga tctttgggtg ggatgaaatc
     1981 ccaaacattg gagatcctaa aaaggccgca gaagactaca gagtgagaat ggccaagacc
     2041 ttctttcgtg cacgctttga tacccaggaa cccccaccaa aagagaaagc aaaagttggt
     2101 aactga
//
LOCUS       XM_071832719             684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842599), mRNA.
ACCESSION   XM_071832719
VERSION     XM_071832719.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139842599"
                     /note="uncharacterized LOC139842599; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842599"
     CDS             1..684
                     /gene="LOC139842599"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688820.1"
                     /db_xref="GeneID:139842599"
                     /translation="MGGNLNYRPSLGIWYNIIATGDIVEDLGIRFKNSFVKVIGNGRD
                     TSFWHEVWIGQDKLCDAFPRLYRLETFKHASVSMRVYTRGSSNQFSWAWVHQPMGRSI
                     GELEDLERVISDIKISEDNDSWKWSLDGVKQFTVKKLSGLCDEKMQASGSNLVETLRN
                     NLVPKNIEVFVWRLMKKRLPIRIELDKRGIDLHSVLCPLCDDDCETTDHTVLFCSHAH
                     DIWSRVFSW"
     misc_feature    <79..231
                     /gene="LOC139842599"
                     /note="4'-phosphopantetheinyl transferase superfamily;
                     Region: ACPS; cl00500"
                     /db_xref="CDD:444941"
     misc_feature    <478..651
                     /gene="LOC139842599"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggtggta atttaaatta ccgcccatct ttgggcattt ggtataatat tattgctaca
       61 ggtgacatcg ttgaagactt gggtatccga ttcaagaact ctttcgttaa agttattggg
      121 aatgggaggg atacatcgtt ttggcatgaa gtgtggatcg ggcaagataa attatgtgat
      181 gctttcccac gtttgtatcg tttagaaaca ttcaaacatg cttctgtttc catgcgtgtg
      241 tatacaaggg ggagctcgaa ccaattttct tgggcttggg tccatcaacc tatgggtcgt
      301 agcattggtg aacttgaaga cttggaacgg gtcatatcgg atattaagat tagtgaggat
      361 aacgatagtt ggaagtggag cttagatggc gttaaacaat tcaccgttaa gaagttatcg
      421 gggctttgtg acgaaaaaat gcaagcttcg ggaagcaatt tggttgagac actacgcaat
      481 aacttagtac caaaaaatat tgaagtgttc gtttggcggc ttatgaagaa aagactaccg
      541 ataaggattg agttggataa aagaggtatt gatcttcata gtgttctatg ccccttatgt
      601 gatgatgatt gtgagactac ggatcatacc gttctctttt gctcccatgc gcatgatatt
      661 tggtctcggg tttttagttg gtag
//
LOCUS       XM_071832720            1542 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842600), mRNA.
ACCESSION   XM_071832720
VERSION     XM_071832720.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1542
                     /gene="LOC139842600"
                     /note="uncharacterized LOC139842600; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842600"
     CDS             1..1542
                     /gene="LOC139842600"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688821.1"
                     /db_xref="GeneID:139842600"
                     /translation="MDRIDRTKWMYDIARTSPDYLKWLKEFITIAETDQLNKGSTVIT
                     CPCKKMYEWEVIQGFMRGYTCWSYHGESLTDHNPGSSDSNQLNEEDSYISDNDNFEAM
                     FVDIEDNVDEKYHEKFEQLKVDSEKPLYNGCTKFSKLSAVIKLFNIKANNGWSDTSFT
                     SLLELLHKMLPEDNELPVSTYYAKKLMCPMGLEIQRIHACPNDCMLYRNENENLHECK
                     VCGTSRYKRGKPTDEDTDENGTPAKVLWYFPIIPRLKRLFANTKNAKLLRWHAEERKK
                     DEKIRHVADSVQWRTIDNEFEDFGNEILNIRLGLSSDGMNPFGDLGSGHSTWPVLLCI
                     YNLPSCLCMKRKHIMLSLLIQGPKQPENDIDVYLAPLIDDLKLLWDTDVQVYDSYKKE
                     YFQLRAMLFCTINDFPAYGNLYGYTTKGKKACPVCEKNIHSIWLKNCRKLAFMGHRRE
                     LAMNHPYRFKNDLFDGTVEKSVLPPRSDGKTIFKMDRKLKVVLGKTGNGPPKGMWKKN
                     PYFGN"
     misc_feature    22..213
                     /gene="LOC139842600"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    829..1455
                     /gene="LOC139842600"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atggatcgga ttgatcggac taaatggatg tacgacatag cacggactag ccccgactat
       61 ctgaaatggc ttaaagaatt tataaccatt gcggagactg atcaattaaa taaaggaagc
      121 actgtaatca cttgtccttg taaaaaaatg tatgaatggg aagtcattca aggatttatg
      181 agagggtaca catgttggtc ttatcacggt gaatcattaa ccgatcataa cccaggctct
      241 tcagattcca atcaattaaa cgaagaagat tcatacatta gtgataacga taattttgag
      301 gccatgtttg tggatattga ggataatgtt gacgaaaagt atcatgagaa atttgaacaa
      361 cttaaagttg actctgaaaa accgttatac aacggttgta cgaaattttc aaaactttct
      421 gccgtgataa aactgtttaa tataaaagca aacaatggtt ggagcgacac aagtttcact
      481 agcttgttag agttgttgca taaaatgctc cccgaagata atgagttgcc ggtttcaaca
      541 tactatgcca agaaattgat gtgcccgatg ggattggaaa tacaaagaat acatgcatgt
      601 ccaaatgatt gtatgctata caggaatgaa aatgaaaacc ttcatgaatg taaggtatgt
      661 ggtacatcta ggtataaacg tggaaaacca actgacgaag atactgatga aaatggaact
      721 cctgcaaaag tattgtggta tttccctatc ataccaagat tgaagaggtt atttgcaaat
      781 accaaaaatg caaaattatt acgttggcat gcggaagagc gtaaaaagga tgaaaaaata
      841 agacatgtgg ccgattcagt tcaatggaga actattgata acgaatttga agactttggg
      901 aatgagatac taaatattag gttgggactt agttcagatg gaatgaatcc tttcggagat
      961 ttgggtagcg gtcatagcac atggcctgtt ttgttatgca tttacaacct tccatcttgt
     1021 ctatgtatga aacgaaaaca cataatgcta tcccttttaa ttcaaggccc aaaacaacct
     1081 gaaaacgaca ttgatgttta tttggcaccg ttgattgatg acttaaagtt actatgggat
     1141 accgatgtac aagtctatga ttcatacaag aaagagtact ttcaactaag ggcaatgctt
     1201 ttttgcacca ttaacgattt tccagcgtat ggtaatttgt atggatatac tacgaaaggg
     1261 aaaaaagcat gtcctgtttg tgagaaaaat attcactcga tatggttgaa aaattgtagg
     1321 aaactagcat ttatgggaca tagaagagag cttgctatga atcaccctta tcgcttcaaa
     1381 aatgacttat ttgatggtac tgtagagaaa agcgttctac cgccacgatc ggatggaaaa
     1441 actattttca aaatggatag gaagctaaaa gttgtgttgg gaaaaaccgg taatggtccg
     1501 ccgaaaggaa tgtggaaaaa aaatccatat tttgggaatt ag
//
LOCUS       XM_071832721             855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842602), mRNA.
ACCESSION   XM_071832721
VERSION     XM_071832721.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..855
                     /gene="LOC139842602"
                     /note="uncharacterized LOC139842602; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842602"
     CDS             1..855
                     /gene="LOC139842602"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688822.1"
                     /db_xref="GeneID:139842602"
                     /translation="MASISSQTKTSCHARSISLPSTLDQSSLFSKKLFQDATSCTSSL
                     SLDHKLNGLNDMYESIESFITFPTSQRLVGTKQQVNVLLDELVELLDLCSTTKDALSM
                     SMDAANELQSVLRRKRGDNVGLISSVREYLSLRKNVKNLINKSISHLKKQGSLFNSEE
                     GTTPKALKEMGPNTCIVFVSLFSFISGSSSQSKTKAWFSVSKILGNKRVQWNQVLEKD
                     EVKRVDDELLAVFSLKEVKSASLDVEVIRKRLAEMEFILQNLDEQVECLFRHLIKTRV
                     CLLNMYNC"
     misc_feature    145..843
                     /gene="LOC139842602"
                     /note="Protein BPS1; Region: BPS1; pfam03087"
                     /db_xref="CDD:427127"
ORIGIN      
        1 atggcttcga tttcttctca aacaaaaacc agttgtcatg ctcgatcaat cagcttaccg
       61 tctacattag accaatcatc cctattcagc aaaaaactat ttcaagatgc cacatcttgt
      121 acatcatcat tatcattaga ccacaagtta aatggtctta acgatatgta tgaatctatc
      181 gagtcattta taacatttcc aacctctcaa cgattagtag gcaccaaaca acaagtgaac
      241 gtgttgttag atgaacttgt cgagctcttg gatctgtgta gtactaccaa agatgcattg
      301 tctatgtcta tggatgctgc caacgagttg caatcagttc ttcgacgaaa aagaggtgat
      361 aatgtggggt tgatttcgtc tgtaagggaa tatttatccc tgagaaaaaa tgtaaagaat
      421 ctcattaata aatcgatatc acatttgaaa aaacaaggtt ctttgttcaa tagtgaagaa
      481 ggaacgacac ctaaggcgct aaaggaaatg ggaccaaaca cttgtattgt gtttgtgtcc
      541 ttgtttagtt tcatatctgg atcaagttca cagtcaaaga ctaaagcatg gttttcggtg
      601 tcaaagattt tgggcaacaa acgtgtgcag tggaatcaag tgcttgagaa ggatgaagtt
      661 aagcgagtgg atgacgaatt actggctgtt tttagcctta aggaagtaaa atcagctagt
      721 ttagatgttg aagttatacg caaaagatta gccgaaatgg aatttatcct ccaaaatcta
      781 gatgaacaag ttgaatgcct ttttcgacat ttaatcaaaa ctagagtgtg ccttctaaac
      841 atgtacaact gctag
//
LOCUS       XM_071832722             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842603), mRNA.
ACCESSION   XM_071832722
VERSION     XM_071832722.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 82% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139842603"
                     /note="uncharacterized LOC139842603; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842603"
     CDS             1..861
                     /gene="LOC139842603"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688823.1"
                     /db_xref="GeneID:139842603"
                     /translation="MASISSQTKTSCHARSISLPSTLDQSSLFSKKLFQDATSCTSSL
                     SLDHKLNGLNGMYESIESFLTFPTSQRLLGTKQQVNELLDELVELLDLCSTTKDALSM
                     SIDAAKELQSVLRRKRGDNVGLTSSIREYISVRKNVKNLINKSISRLRKQGSLFTNDE
                     GTTPNVNALKEMGPNTCVVFESLLNFISGSSSQSKIKGWFLVSKILGNKRLQCNQVLE
                     KDEIKRVDDELLAVFSHKGVKSACLDVEVIRERLAEMEFTLQNLDEQVECLFRHLIKT
                     RVCLLNMYNC"
     misc_feature    145..849
                     /gene="LOC139842603"
                     /note="Protein BPS1; Region: BPS1; pfam03087"
                     /db_xref="CDD:427127"
ORIGIN      
        1 atggcttcga tttcttctca aacaaaaacc agttgtcatg ctcgatccat cagcttaccg
       61 tctacattag accaatcatc cctgttcagc aaaaaactat ttcaagatgc cacatcttgc
      121 acatcatcat tatcattaga ccacaaatta aatggtctta atggtatgta tgaatctatc
      181 gagtcatttc ttacatttcc aacctctcaa cgattattag gcaccaaaca acaagtgaac
      241 gagttgttag atgaacttgt cgagctctta gatctgtgta gtacaaccaa agatgcattg
      301 tctatgtcta tcgatgctgc aaaagaattg caatcagttc ttcgacgaaa aagaggtgat
      361 aatgtggggt taacttcatc cattagggaa tatatatccg tacgaaaaaa tgtaaagaat
      421 ctcattaata aatcgatatc acgtttgaga aaacaaggtt ctttgttcac taatgatgaa
      481 ggaacaacac caaatgttaa cgcgctgaag gaaatgggac caaacacttg tgttgtgttt
      541 gagtccttgt tgaacttcat atcaggatca agttcccaat caaagattaa aggctggttt
      601 ttggtctcga agattttagg caataaacgt ttgcagtgca atcaagtgct tgagaaggat
      661 gaaattaagc gagtggatga tgaattactg gctgttttta gccacaaggg agtaaaatca
      721 gcctgtttag atgtcgaagt tatacgtgaa agattagccg aaatggaatt taccctccaa
      781 aatctagatg aacaagttga atgccttttt cgacatttaa tcaaaactag agtgtgcctt
      841 ctaaacatgt acaactgcta g
//
LOCUS       XM_071832724             840 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842604), mRNA.
ACCESSION   XM_071832724
VERSION     XM_071832724.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..840
                     /gene="LOC139842604"
                     /note="uncharacterized LOC139842604; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842604"
     CDS             1..840
                     /gene="LOC139842604"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688825.1"
                     /db_xref="GeneID:139842604"
                     /translation="MRAPTTVLSGFSDESAWPLGCIKLELELVDDNDSTRTRVVHVEF
                     RVMRSYSCYNALLRRVTLQKFGMVPSTVHGMIKFPTKQGIATIQMEFGRALCASVTPP
                     KPLPTVEEQIQSSSILVNPKYPDKRIQIGGTLSDGIKVRLHDLLIANMDIFVWCENDM
                     TGVPRHFANHKLHANPNLTPVRQKKRPMAPERSEWLRLEVDKLVHANILREVRYQTWV
                     VNPVLVKKGTDLGACASILRTSIRRALISAKKFKCFLDAYKGYHQIHMVVGDEDKIAF
                     HTD"
ORIGIN      
        1 atgcgggcac ccacaactgt tctgtcagga ttctctgacg aatctgcatg gccattaggg
       61 tgcatcaagc ttgaactaga gttggtcgat gataatgatt caacccgcac acgagtcgtt
      121 catgttgaat tccgtgtgat gcgttcttat tcatgttaca atgcactcct ccggcgagtg
      181 actttacaga agtttggcat ggtaccctct actgttcatg gcatgatcaa gttcccaact
      241 aagcaaggca tcgctactat tcagatggag ttcggaagag cattatgtgc ttcagtaaca
      301 ccacctaaac cattgcctac agttgaagaa cagatacaaa gcagttccat cttagttaac
      361 ccaaagtatc ctgacaagcg aattcaaatt gggggaaccc tttcggatgg cataaaggtc
      421 cgattgcatg acctactaat agccaacatg gatatcttcg tgtggtgtga aaatgatatg
      481 actggggtac cacgacattt cgccaatcac aagttgcatg cgaatccgaa cttgactcct
      541 gtacgacaaa agaagcgccc gatggcgcca gaaagaagcg aatggttgag gttggaagtg
      601 gacaagctgg ttcatgcgaa cattctcaga gaggtgcggt atcagacatg ggttgtgaat
      661 ccagttttgg ttaaaaaggg gacggatctt ggcgcatgtg cgtcgatttt aaggacatca
      721 ataaggcgtg ccctgatatc ggctaaaaag tttaaatgct ttttggatgc atataagggg
      781 tatcaccaga ttcatatggt agtaggggat gaagacaaga tcgcgtttca cactgattag
//
LOCUS       XM_071832725            1131 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842605), mRNA.
ACCESSION   XM_071832725
VERSION     XM_071832725.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1131
                     /gene="LOC139842605"
                     /note="uncharacterized LOC139842605; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842605"
     CDS             1..1131
                     /gene="LOC139842605"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688826.1"
                     /db_xref="GeneID:139842605"
                     /translation="MPNWKFLDISPDVLMAEDCSHIVPMRGVSFIDDDDDDDDCHLAF
                     QLCECNLHDYVRNVFKDVHHNVILETRYTLRWQNLIQGMLQAVHHIHSNKKAHADLNP
                     CKILISNNCVKIGGMTRCKELDPESRDSDYFDLARNELHIFTNGRHVFTNERNSLGGL
                     DVDELFRNLQSLRNYLPEIHDAISKLLYPSERILVGIDDVNIKLLPWLMGHPSLWSPE
                     KRINFFIEVSNSLFEDRGSWQYANDVENCYNCGDWSKVFHPSVIKALERIKVDGNTIL
                     YEYDKFSLTSLLRFIRNIFGHTIKTFFRAKFNGARTGYRISRHDLNFESVERILRYFY
                     PGLLISLYYAIHRNLYRIPTVSRLHGCIDGFVFDFSILLFGG"
     misc_feature    <118..576
                     /gene="LOC139842605"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(652..657,664..666,676..678,883..885)
                     /gene="LOC139842605"
                     /note="ligand binding site [chemical binding]; other site"
                     /db_xref="CDD:199216"
     misc_feature    658..1047
                     /gene="LOC139842605"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1 and RNase L; Region:
                     RNase_Ire1_like; cl15368"
                     /db_xref="CDD:472796"
     misc_feature    order(658..660,1003..1005,1012..1017,1027..1029)
                     /gene="LOC139842605"
                     /note="kinase interface [polypeptide binding]; other site"
                     /db_xref="CDD:199216"
     misc_feature    order(664..666,676..678,685..690,874..876,883..888)
                     /gene="LOC139842605"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:199216"
ORIGIN      
        1 atgccgaact ggaaattttt agatatcagt cccgatgtct tgatggctga agattgttca
       61 catattgttc ctatgcgggg tgtgagtttt atagatgatg atgatgatga tgatgattgt
      121 catcttgcat ttcaactgtg cgagtgcaat cttcatgatt acgttagaaa tgttttcaag
      181 gatgttcacc ataacgtaat cttggaaaca agatatactt taagatggca aaatctaata
      241 caggggatgt tacaggcagt tcatcatatt cactctaata aaaaagctca tgctgatttg
      301 aacccctgta agatcctaat ttccaataac tgtgtaaaga ttggtggtat gacccgttgt
      361 aaggaactgg acccggaatc tagagattcg gattactttg acttggcaag gaacgagctt
      421 catattttta ccaacgggcg tcatgtattc actaacgaac gcaacagcct cggtgggctc
      481 gatgtagatg aactttttcg aaatttgcaa tctttgagaa attaccttcc agaaattcat
      541 gatgctattt cgaaactttt gtatccatca gaaaggatac tagttgggat cgatgacgtt
      601 aacataaagt tgcttccttg gttaatgggt catccttcac tttggagccc ggagaagcgt
      661 ataaatttct ttatagaagt cagcaactca ttgtttgagg accgcgggag ttggcaatat
      721 gcaaacgatg tcgaaaactg ttataattgt ggtgattgga gtaaagtttt tcatccgagt
      781 gttattaaag ctttggaaag gattaaggtt gatggaaata caatcctgta tgagtatgat
      841 aagttttctt tgactagctt gcttagattt atcaggaaca tttttggaca tacgataaaa
      901 accttcttca gggcgaagtt taatggggcg agaacagggt accgtatatc tcgacatgac
      961 ttaaactttg agagtgtaga gagaattcta aggtatttct atcctggctt gcttatcagt
     1021 ctctattacg caatccacag aaatctatat cgtattccaa ctgtatccag gttacatgga
     1081 tgtattgatg gatttgtatt tgatttttcg attcttttgt ttggtggata a
//
LOCUS       XM_071832726             387 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin-responsive protein
            SAUR68-like (LOC139842606), mRNA.
ACCESSION   XM_071832726
VERSION     XM_071832726.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..387
                     /gene="LOC139842606"
                     /note="auxin-responsive protein SAUR68-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139842606"
     CDS             1..387
                     /gene="LOC139842606"
                     /codon_start=1
                     /product="auxin-responsive protein SAUR68-like"
                     /protein_id="XP_071688827.1"
                     /db_xref="GeneID:139842606"
                     /translation="MLTPKKLVKLARRWRTEAAKGGSTTVANKGHFVVYTVDNNRFVI
                     PLHYLNNNIFRELLKMSEDEFGLPKNGPITLACDSSLMNYLVYVFERDLTKEFEALLV
                     SIATNHCNYSFDHVGENGKQMLVYGY"
     misc_feature    19..258
                     /gene="LOC139842606"
                     /note="Auxin responsive protein; Region: Auxin_inducible;
                     pfam02519"
                     /db_xref="CDD:460580"
ORIGIN      
        1 atgttgacac ctaaaaagct tgtgaaattg gcaagaagat ggcgtacgga ggctgcaaaa
       61 ggtggttcaa caacagttgc taacaaaggt cattttgttg tgtatactgt tgacaacaat
      121 aggtttgtga ttccattaca ttatctcaac aacaacattt ttcgcgagct tttgaagatg
      181 tctgaggacg agtttgggtt gcctaagaac gggcctatta ctttagcttg tgactcaagt
      241 ctcatgaact atttagtata cgtatttgaa cgagatttga caaaagagtt tgaggcttta
      301 ctcgtttcca tagctacaaa tcattgtaac tattcattcg atcacgttgg agaaaatgga
      361 aaacagatgt tggtttatgg ttactaa
//
LOCUS       XM_071832727            1737 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides lysine histidine
            transporter-like 8 (LOC139842607), mRNA.
ACCESSION   XM_071832727
VERSION     XM_071832727.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1737
                     /gene="LOC139842607"
                     /note="lysine histidine transporter-like 8; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139842607"
     CDS             1..1737
                     /gene="LOC139842607"
                     /codon_start=1
                     /product="lysine histidine transporter-like 8"
                     /protein_id="XP_071688828.1"
                     /db_xref="GeneID:139842607"
                     /translation="MEFTRDHVGSAPITPSTVHSPLTSALSSQLHSPSLSRSPLLHSP
                     DHDYLQNTTTAIPKTGHKLTFSNTPPVVSAPPSQMHSPSMSRSPPFLGTPDRPVTMPP
                     SGARTPMAYIKSRNLTPRFLTPLGSPLRKALKLTKLDPTDAWLPITESRNGNAYYAAF
                     HTLCSGIGIQALILPVAFTILGWAWGIIALTFAFIWQLYTLYLLVNLHESHETGLRYS
                     RYMQLASATFGERLGKTLTLFPIMYLSAGTCMACIMIGGSTAKIFFQIVCAGSECKAE
                     TLTTVEWYLVFTCAAVLLSQLPNLNSIAGVSLVGAITAVGYCTTIWAVSVSEGRLANM
                     SYNPVRVGSEVSKVFDVLNALGIIAFAFRGHNLILEIQATMPSSEKHPSAVPMWKGVK
                     VSYTLIAMCLFPLAIGGYWAYGQLIPSSGMLAALFMFHSQDIAKSVQALVCILIMINA
                     VSSFQIYAMPSFDEMESEYVKKFKKPTTWWIRVIMRAMFGFINFLLAIATPFLASLAG
                     LVGGIALPVTLVYPCFMWLKVKKPKVYSLSWWLNWGLGVLGMGLSGLLISAGVYVVIN
                     TGINFNKFFKPE"
     misc_feature    451..1695
                     /gene="LOC139842607"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; Region: SLC5-6-like_sbd; cl00456"
                     /db_xref="CDD:444915"
ORIGIN      
        1 atggaattta cccgtgatca cgttggatcc gccccgataa ccccatccac ggtccactca
       61 ccgctaacat ccgccctctc atcgcaactt cattccccat cgttatctcg gtcacccctt
      121 ctccactcac cggaccatga ctacttacaa aacacaacga cagcgatacc aaaaaccgga
      181 cacaagctta cattttccaa cacaccacct gtcgtatcag ctccaccgtc acagatgcac
      241 tcaccatcga tgtcacgatc accaccgttt cttgggacac cagatcgtcc agtgaccatg
      301 ccaccaagtg gggcaaggac ccccatggct tacataaagt ctaggaattt gacaccaaga
      361 tttttgacac ctttaggtag tcctttaaga aaggctctta agctcaccaa actggatccc
      421 acagatgcat ggctaccaat aactgaatca agaaatggga atgcttatta tgctgctttt
      481 catacacttt gttctgggat tgggattcaa gctcttattc ttcctgttgc tttcaccatt
      541 cttggctggg cctggggaat tatagcgttg acttttgcgt tcatatggca actttacact
      601 ttgtatttgc tagtaaatct acatgaatct catgaaactg ggttgcgata cagtagatac
      661 atgcaactcg caagtgcaac ttttggtgaa aggttaggga aaacccttac gctatttccg
      721 atcatgtact tatcagcggg tacgtgtatg gcgtgtatca tgattggagg atcaacggcc
      781 aagatattct ttcaaattgt gtgtgccgga agcgaatgca aagcagaaac acttacaacc
      841 gtagaatggt acttggtctt cacttgtgct gcagtactac tttcacaatt gcctaatctg
      901 aactcaattg cgggcgtttc tcttgttggg gcaattacgg ctgtcggata ttgtacaacg
      961 atatgggccg tctcagtgtc tgaaggccga ctagcgaaca tgtcatacaa tccagttagg
     1021 gttgggagtg aagtctcaaa agtttttgat gtgttgaatg ctcttggtat cattgctttt
     1081 gcattcagag gacacaatct tattttggaa attcaggcca ccatgccctc aagtgagaag
     1141 catccatcag cagtacccat gtggaaaggt gttaaagtat catacacact cattgcaatg
     1201 tgtttgttcc cactcgcaat tggaggttat tgggcttatg gccagttgat tccatcaagt
     1261 gggatgttgg cagcattatt catgtttcac tcccaagaca ttgcaaaatc tgtacaagca
     1321 ttagtatgca tactcataat gatcaacgct gttagctcat ttcaaatcta tgcaatgcca
     1381 tctttcgacg agatggagtc cgaatacgtt aaaaagttta aaaagccgac tacttggtgg
     1441 atcagagtga tcatgagggc aatgttcgga ttcattaact ttttactcgc gatagccacc
     1501 ccgtttttag ccagtcttgc tggtttggtt ggtggaatcg ctttgccggt gacgttagtg
     1561 tacccgtgtt ttatgtggct taaggttaag aaaccaaagg tttatagcct ctcgtggtgg
     1621 ttgaattggg gacttggtgt tcttggaatg ggcttaagtg ggctattgat ttcagctggt
     1681 gtttatgttg ttattaacac tggtatcaat tttaataaat tttttaagcc tgagtaa
//
LOCUS       XM_071832728             342 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842608), mRNA.
ACCESSION   XM_071832728
VERSION     XM_071832728.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..342
                     /gene="LOC139842608"
                     /note="uncharacterized LOC139842608; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842608"
     CDS             1..342
                     /gene="LOC139842608"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688829.1"
                     /db_xref="GeneID:139842608"
                     /translation="MEGCNSVRQTRKTSPRYIGPFRIRQVLNDQTVVLDLPPELAGIH
                     DTFNICYIRKCKVDDENQILPLQDLKVDSSKKLVEEPVRIVDRKVTKLRKKQIPTVRV
                     EWKHSLGTNLT"
ORIGIN      
        1 atggaagggt gtaattcggt tcggcaaacg aggaaaacta gtccaagata cattggtcct
       61 tttagaattc gtcaagtgct aaacgatcaa accgtagtgt tagatcttcc tccagagtta
      121 gctggtattc atgacacgtt caacatctgc tatattcgta agtgtaaagt ggacgatgaa
      181 aatcaaattc ttccgctcca agatctgaaa gtagattcaa gtaagaaatt ggtggaagaa
      241 ccagtgagga tcgtcgacag aaaagtgact aagttacgta aaaagcagat tcccacggtg
      301 cgtgtggaat ggaagcatag tttaggcacc aatctgacat ag
//
LOCUS       XM_071832729            1398 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842609), mRNA.
ACCESSION   XM_071832729
VERSION     XM_071832729.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1398
                     /gene="LOC139842609"
                     /note="uncharacterized LOC139842609; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842609"
     CDS             1..1398
                     /gene="LOC139842609"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688830.1"
                     /db_xref="GeneID:139842609"
                     /translation="MWNTRLVAPTLVPPAITKPPIGADNRKIEGNFFTMIKDMLFHGL
                     IDENPFEHIQQFNDICDIYKNKDVCDDVFKLRAFPFTLQREAKIWLRNLPSDSIRSFQ
                     DLTDAFIKHFFLPSKVERLRMGINGFTQRSDETLYDAWVCFKKMLRACPPHGLSKKEY
                     INTFYRGTNALTKQYLHSSSGGQQIRNQQTSFQNFESTVGRLSNQVVERPQGTLPLNT
                     QVNPKNNRNNQHSQQNQQNNNTRVIPIESNTPSQHNNQASSSNPNNNYAQVNSIASIE
                     EEDQTDCPHVFTFDVEEDKFEFNETLEIDTMDFGVFTFLNDSEEAKKGLNAKKQKNEV
                     EVYATSIKEKNETPVSHPQPLPPTHLKDVNCKSTLPDNENIYIKLPLAEVLENMPNYG
                     KFLKTLMAKKGDVEQSSTTFLKKECDEILKKCNLPTKMGDRRPFLIPCNVNGSEMFTS
                     LADSGANINFMPYSI"
     misc_feature    226..501
                     /gene="LOC139842609"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
ORIGIN      
        1 atgtggaaca ctaggttggt tgcacccacc ttggtgcctc cggctattac aaaaccacca
       61 attggagccg ataataggaa gattgaggga aactttttca caatgatcaa ggatatgcta
      121 tttcatggct tgatagatga gaatccgttt gaacacattc aacaatttaa cgacatttgt
      181 gatatctata agaacaagga tgtgtgcgat gatgttttca agttaagggc attccccttt
      241 acacttcaaa gagaggcgaa aatatggtta aggaacttac cttccgattc gattaggagt
      301 tttcaagatt taacagatgc gtttatcaag cacttctttc tgccatcaaa ggtggaacga
      361 cttaggatgg gaattaatgg attcactcaa cggagtgatg agactttgta tgacgcatgg
      421 gtatgtttca agaagatgct aagagcttgc ccaccacatg gtttgagtaa aaaggagtac
      481 atcaacacgt tctaccgggg tactaatgct ttgactaagc aatatcttca ttcatcttcg
      541 ggtggacaac aaatacgaaa ccaacaaact tcatttcaaa attttgagag caccgttgga
      601 agactttcaa atcaagttgt cgaaagacca caaggaactt tacctttaaa cactcaagtt
      661 aacccaaaaa acaaccgaaa caaccaacac tcccaacaaa accaacaaaa caataacacg
      721 agagttattc ctatcgagag caacactccc agccaacaca acaaccaagc aagttcatca
      781 aatcccaata ataattatgc tcaagtgaat tcgattgctt caattgaaga ggaggatcaa
      841 accgattgtc ctcatgtttt tacgttcgat gttgaagagg acaagtttga gtttaatgaa
      901 acattggaaa tcgatacaat ggattttggg gtattcacat ttttgaatga ttcggaagag
      961 gcaaaaaaag gtttaaatgc aaagaagcaa aagaacgagg ttgaggttta tgctacatca
     1021 atcaaggaga aaaatgagac accggtctca catcctcaac cattacctcc tacacatcta
     1081 aaggatgtga attgtaagtc aactctaccc gataatgaaa acatttatat taaactcccc
     1141 ctggcagagg tgcttgagaa tatgcccaat tatggaaaat ttttgaagac actcatggcc
     1201 aaaaagggag atgttgagca atcatccacc actttcttga aaaaggagtg tgatgagatt
     1261 ttaaagaagt gtaacctgcc aacaaaaatg ggtgatcgca gacctttcct tatcccatgt
     1321 aatgtgaacg ggtcagagat gtttacatct ttagccgact cgggggctaa catcaatttt
     1381 atgccctatt ctatttag
//
LOCUS       XM_071832730             684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842610), mRNA.
ACCESSION   XM_071832730
VERSION     XM_071832730.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139842610"
                     /note="uncharacterized LOC139842610; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842610"
     CDS             1..684
                     /gene="LOC139842610"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688831.1"
                     /db_xref="GeneID:139842610"
                     /translation="MATNTTSLNVSQPPIPIFKGDSYKFWSTEMKTLFKSLDLWDLVE
                     NGYVETSDDGEKSKENQKRDAKSLFIIQQAAEESIFSRIAAATTSNEAWTILQTEFKG
                     SSKVITVKLQSLRRDFETSYMKHGETVQGYLARISSVVSQMKSYGDKITDEIVVAKVL
                     RSLEPKFDHVVAAIEESKDLSKFSFDELMGSLQSHEVRINRSTVREEEKAFQIKGEPE
                     PSYLRSRGR"
     misc_feature    208..606
                     /gene="LOC139842610"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggctacaa acacaacctc tctcaatgta tctcaaccac ctatcccaat ttttaaaggt
       61 gattcataca aattttggag caccgaaatg aagactctct ttaagtcttt agatctgtgg
      121 gatctggtag agaatggtta tgttgaaact agtgatgatg gtgagaagtc caaagaaaat
      181 caaaaacgtg atgcaaaatc cttgtttatc attcaacaag cggcggaaga atccattttt
      241 tcaagaattg ctgcagcaac aacttccaac gaggcttgga ctattctcca aaccgagttt
      301 aaaggatctt ccaaagtaat cactgtcaag ttgcaatctc ttagacgtga ttttgaaacc
      361 tcatatatga agcatggcga aactgtccag gggtatttag caagaatatc ctctgttgtt
      421 agtcaaatga aatcttacgg tgacaagata actgatgaaa tagtagttgc aaaggtgtta
      481 aggagtctgg aacccaagtt tgatcacgta gttgctgcta ttgaagaatc caaagacctg
      541 tctaaatttt catttgatga actaatggga tccttacaat ctcatgaagt caggatcaac
      601 agatctactg tccgagaaga agaaaaggcc tttcagataa agggggagcc agaaccttca
      661 tatttacgtt cgagaggacg ttga
//
LOCUS       XM_071832731            1176 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides GDSL esterase/lipase
            At5g55050-like (LOC139842611), mRNA.
ACCESSION   XM_071832731
VERSION     XM_071832731.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1176
                     /gene="LOC139842611"
                     /note="GDSL esterase/lipase At5g55050-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 50 Proteins"
                     /db_xref="GeneID:139842611"
     CDS             1..1176
                     /gene="LOC139842611"
                     /codon_start=1
                     /product="GDSL esterase/lipase At5g55050-like"
                     /protein_id="XP_071688832.1"
                     /db_xref="GeneID:139842611"
                     /translation="MTRNYLLFIFLVLVVASSPSSCRAGTPAVFIFGDSLLDIGTNNY
                     VLKTVAKSKYPHYGVDFFNSTPSGRFSNGLNMADFMARVAFGETVTSPPAFLSLFSHG
                     KYAESRLQKAINFQRSRRRWRHPFHAFNSSSVQIKENPAVGINFASSGTAILDINTAV
                     DQAVPITEQMTQLQFVHGNLTATIGSWKTQLLFAKSTFFIGVGNNDVHFFALARAKLD
                     PNKYIDLLVETYNKTLTLMYNLGARKFGVVSIPYLGCSPLMRVTIIGGNCSKTANDLA
                     EQLNDKLEQLLWNMTIHSKGMMYSFANTYDILHDFWDNPQRYNFTNVVDACCGLGRFN
                     AMTNCHPVAKLCDNRDEYLFWDVSHPSERATRIMVDMVTFGGLNYARPINWAKLVRL"
     misc_feature    79..1125
                     /gene="LOC139842611"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; Region:
                     SGNH_plant_lipase_like; cd01837"
                     /db_xref="CDD:238875"
     misc_feature    order(103..105,448..450,613..615,1066..1068,1075..1077)
                     /gene="LOC139842611"
                     /note="active site"
                     /db_xref="CDD:238875"
     misc_feature    order(103..105,1066..1068,1075..1077)
                     /gene="LOC139842611"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     misc_feature    order(103..105,448..450,613..615)
                     /gene="LOC139842611"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
ORIGIN      
        1 atgactagaa attatctcct ctttattttc ttggttctcg tcgtagcatc ttctccaagt
       61 tcgtgtcgcg cagggactcc agctgttttc atatttggag actcactact tgatatcgga
      121 acgaataatt acgttttaaa aaccgttgca aaatccaaat acccacatta tggtgtcgac
      181 ttttttaact cgactcctag tggaaggttt agcaacggcc taaacatggc tgattttatg
      241 gctagagtag catttggaga aactgtgaca agcccaccag cattcctatc tctattttcg
      301 cacggtaaat atgcagagag caggcttcag aaagcaataa acttccaacg ttcaagaaga
      361 cgttggagac atccttttca cgcctttaac tcctcttcgg tgcaaataaa ggagaaccct
      421 gcagtaggaa taaacttcgc ttcgtctgga actgcgattc tcgatatcaa caccgctgta
      481 gaccaagcag tgcctataac tgagcaaatg acccaactgc agtttgtcca tgggaaccta
      541 actgcaacaa taggttcatg gaagacacaa ttgttatttg caaaatcaac gttttttata
      601 ggtgtgggta acaacgatgt acacttcttt gcgttggctc gagccaaatt ggatccaaac
      661 aagtacattg atttgcttgt cgaaacgtac aataaaacct taacgttgat gtacaacctc
      721 ggagcaagga aatttggagt cgttagtata ccttatttgg gatgtagtcc attgatgaga
      781 gttactatta taggtgggaa ttgttcgaaa accgcaaatg atttggctga gcaacttaac
      841 gataaacttg aacaattgtt atggaacatg acaattcatt caaagggaat gatgtattcg
      901 tttgcgaata catacgatat acttcacgat ttttgggata acccgcaacg ttataatttt
      961 acgaatgtgg ttgatgcgtg ttgtggattg gggcggttta acgcgatgac aaattgtcat
     1021 ccggtggcaa agttgtgtga caatagagac gagtatctct tttgggatgt gtcgcaccct
     1081 tcggaacgtg ctacaaggat tatggttgat atggttacat ttggtgggct caattacgca
     1141 aggccaatta attgggctaa attagtgagg ctgtaa
//
LOCUS       XM_071832732            2767 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides mechanosensitive ion channel
            protein 8-like (LOC139842612), mRNA.
ACCESSION   XM_071832732
VERSION     XM_071832732.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2767
                     /gene="LOC139842612"
                     /note="mechanosensitive ion channel protein 8-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:139842612"
     CDS             1..2532
                     /gene="LOC139842612"
                     /codon_start=1
                     /product="mechanosensitive ion channel protein 8-like"
                     /protein_id="XP_071688833.1"
                     /db_xref="GeneID:139842612"
                     /translation="MSNPTPMQKSEQSGELRNIDNNNNNVGNQSEVIVKIDNHDKENG
                     GPTILRSPSYEFWKDGNDHTQKSSSNHMNSNYDSPVRGVINNECVNNNNNRNNNRVSD
                     SKQSFENSDVHDHDKYVDDSSSSSEDYEEDEQRLLNQQRQRRVPSNLSYYAPDYDSGA
                     EVLKCTSFQRRTSLVRTKTTQSRLFDPPEVSFSGPYPKTSSQTPGGLTRGSARIENDD
                     EDESSLFDDDNPGDLKNTKLDTLTIIQWIGLVLILALLICTVRFNSWKRTSFRGLYLW
                     QWEILILVLICGRLVSGWCVRIAVFFIERNFLLRKRVLYFVYGVRTPVQNCIWLGWVL
                     FAWNSIFDETVEALHIPLLEVINKFMVCMLVATSLWLIKTLIVKVLASSFHVKKFFDR
                     IQDALFNQYVIETLSGPPLVEIQNNQLGEKSMSRVWKHDGVGSEIGGYSFKEKGSARI
                     GSGRLHRNLGCSKNYEGGITIDHLHRLNHDNVSAWNMKRLMKIIRNGSLTTLDEHLHG
                     TYYDETGTEIRSEIEAKRAARNIFMNVTRSRSKFIYLDDLMRFLREDEAIKTLSLLVA
                     SPDDERVGKRALKNWVVNVFRERKALALTLNDTKTAVNKLHQMVNVVVTLVIMVICLV
                     ILNIATTKVLVLISSQLVVVAFIFGNTCKTIFESIIFLFVLHPFDVGDRCEVDGNQMI
                     VEEMNILNTIFLRGDNQKIYYPNSTLLMRSIANFYRSPDMTDTIDFLIDVKTPADKIA
                     IIKQRIINYVENNKDQWYPNPIVLAIDMFDVNTLKLSVWVQHKMNLQDITEIQTRRGK
                     IIEEMIRNFRELNVEDKPCPLDINIRSMPMPVTPTRFPSTWGQSN"
     misc_feature    1741..2439
                     /gene="LOC139842612"
                     /note="Small-conductance mechanosensitive channel [Cell
                     wall/membrane/envelope biogenesis]; Region: MscS; COG0668"
                     /db_xref="CDD:440432"
ORIGIN      
        1 atgagcaatc ctacaccaat gcagaaatcg gaacaatctg gtgagcttcg aaacatagac
       61 aacaacaata acaatgttgg gaaccaaagc gaagtcattg taaaaatcga taatcatgac
      121 aaggaaaatg gtggtcccac aattttacgt agcccaagct atgagttctg gaaggatgga
      181 aatgatcaca cacaaaaaag ttcttctaat catatgaact cgaattatga cagtcctgtt
      241 agaggtgtaa tcaataacga atgtgtaaat aataacaata atagaaataa taatcgagtt
      301 tcagattcca aacagtcgtt tgaaaacagc gatgtacatg atcatgacaa gtatgtcgac
      361 gattcatcat catcatcaga agattacgaa gaagacgagc aacgattgtt gaatcaacaa
      421 cgacaaagaa gagtaccaag caatttgagc tactacgctc ctgattatga tagtggagct
      481 gaggttttga aatgtacgtc ttttcaaagg agaacaagtt tagtacgaac aaaaacaaca
      541 caatctagat tgtttgatcc accagaggtt tcattttcgg gaccttatcc taaaactagt
      601 agtcaaacgc caggtgggtt aacacgagga tctgcgagaa ttgaaaacga tgacgaggat
      661 gaatcttctt tgtttgatga tgataatcct ggtgatttga aaaacactaa acttgatacg
      721 ttgacgatta ttcaatggat cggtcttgtt ttgatcctgg cattgttgat ttgcaccgtt
      781 agatttaact catggaaacg aacgtcgttt aggggacttt atttgtggca atgggagatt
      841 ttgatcctgg tgttgatatg tggaagattg gtttcgggtt ggtgcgttag gattgctgtt
      901 tttttcatcg aacgaaattt tttattaaga aaacgagttt tgtattttgt gtatggagtt
      961 cgaaccccgg ttcagaattg tatttggtta ggatgggttt tattcgcgtg gaattcaata
     1021 tttgatgaaa cagttgaagc tcttcatatt cctctactcg aagttataaa caagttcatg
     1081 gtgtgtatgc ttgttgcgac gtcattatgg ttaatcaaga ctttgatagt taaagttctt
     1141 gcatcgtcgt ttcatgtgaa aaaattcttt gatcgaattc aagatgcttt gtttaaccaa
     1201 tatgttatcg agacgctttc ggggccccca ttggtcgaga ttcaaaacaa tcaattaggc
     1261 gagaagagta tgtcgagagt atggaaacac gatggtgtgg ggtcagaaat tggcggttat
     1321 tcgttcaaag aaaaaggtag tgcgagaata gggagtggaa ggttacatag gaatttgggg
     1381 tgttcgaaga attatgaagg cgggattacg attgatcatt tgcataggtt gaatcatgat
     1441 aatgtgtcgg cttggaatat gaaacgattg atgaaaatca ttcgtaatgg gtcgttgaca
     1501 acattggatg aacatttaca tggtacttac tatgatgaaa cggggactga aattcgaagt
     1561 gaaattgaag cgaaacgtgc tgctaggaac attttcatga atgttaccag gagtcgatcc
     1621 aagttcatct atttggatga tttgatgagg tttttgagag aagatgaagc tataaagaca
     1681 ctgtctttgt tggttgcatc acctgatgat gaaagagtgg gaaaaagagc cttgaagaat
     1741 tgggtggtta atgtttttcg agaacgaaaa gcgcttgcat tgacactcaa tgatacgaaa
     1801 accgcagtca acaaattaca tcaaatggtg aatgtggtag tcacacttgt gattatggtc
     1861 atttgccttg tgattctaaa cattgcgacg actaaggttc tggttcttat aagctctcaa
     1921 cttgtcgtgg tggcctttat attcggtaac acttgcaaaa ccatattcga atccatcatc
     1981 tttttgtttg tgttgcaccc ttttgatgtt ggtgatcgtt gtgaggtcga cggtaatcag
     2041 atgattgtgg aagaaatgaa tattttgaac acaattttcc taagagggga taatcagaag
     2101 atttactatc ctaacagcac tcttttgatg agatctattg ccaacttcta tcgtagtccc
     2161 gatatgacag atacgatcga ctttttgatc gatgtgaaga cacctgcaga caaaatcgca
     2221 atcattaaac aaagaataat caactatgtg gagaacaaca aagatcaatg gtacccgaat
     2281 ccgattgtgc tagcaatcga catgttcgat gtgaacacac taaagttatc agtttgggta
     2341 caacataaaa tgaaccttca agacataaca gaaatacaga cgagaagggg caagattatc
     2401 gaagagatga tacgaaactt tagagaactt aatgttgaag acaaaccatg tccacttgat
     2461 attaacatac gaagcatgcc tatgcccgtt actcctactc gctttccttc aacatgggga
     2521 cagtctaatt aataagctgg gaaacaagaa catgagacca tgagtgtgga aagtaaggtt
     2581 gtgtttggtt cgcagaattg atgaaagttt aatccatcaa atccttaggc taaaggaatt
     2641 gaaattcatt cctgtaaata cattccacga accaaacaca tcgtcacatg aattgaccaa
     2701 agcgaaaaat atgtgtgatt catcatttca ctttctaacc gtaaaatata tgtgatactg
     2761 ataatgg
//
LOCUS       XM_071832733            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842613), mRNA.
ACCESSION   XM_071832733
VERSION     XM_071832733.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139842613"
                     /note="uncharacterized LOC139842613; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins"
                     /db_xref="GeneID:139842613"
     CDS             1..1038
                     /gene="LOC139842613"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688834.1"
                     /db_xref="GeneID:139842613"
                     /translation="MVRMLLQLKDSTIEKKLMMETIKNVEEVLKNRIRLKASVDVVRW
                     LTFQACAFRGHDETVNSNNRENFIELLKLLASYNDEVSKVVLENAPYNSKFTSSDIQK
                     EILSIIVNKVQKHIWNEVGNSYFCVMVDEARDEGKREQMAIVLRFVNKDGIIRERFLD
                     LVHVMDTFAMTLKINLWKILLQYEFDTSKIRGQGYDGASNMRGEWNGLQALVIKGCPY
                     AYYVHCFAYRLQLALIIASREVIPVHQFFNKLGSIINVICASSKRHDELQKSMALEIK
                     RLLEHGEIQACKGANQIGTLKRSVLEGITEDSSVYSQRADADEAFIYLTSFEFVFILH
                     LMKEIMGRTNI"
     misc_feature    16..621
                     /gene="LOC139842613"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atggtacgga tgcttttaca gttaaaggac tcaacaattg aaaaaaagtt aatgatggag
       61 acaattaaaa atgtagagga agtcttaaag aatcgtataa gattgaaagc ttcagtggat
      121 gtagttcgtt ggttgacatt ccaagcttgt gcttttagag ggcatgatga aactgttaac
      181 tcaaacaatc gtgaaaattt tattgagttg ttaaaacttc tagcctcata taatgatgaa
      241 gtttctaagg tcgtattaga gaatgctccg tataactcaa aattcacttc gagtgacatt
      301 caaaaagaaa tattgagtat tattgtcaat aaggttcaga aacatatttg gaatgaagtg
      361 ggtaattctt acttttgtgt tatggttgat gaggcacgtg atgagggtaa acgggaacaa
      421 atggccatag ttttaagatt tgtaaataaa gatgggatta ttagagagag gtttttagat
      481 ttggtacacg ttatggacac attcgcaatg actcttaaaa taaatttgtg gaagatactt
      541 cttcaatatg agtttgatac tagtaaaatt cggggtcaag gctacgatgg tgctagtaac
      601 atgagaggag aatggaacgg gttacaagca cttgttatta aggggtgccc atatgcgtac
      661 tatgttcatt gcttcgctta tagattacaa cttgcgttaa ttattgcttc aagagaagtt
      721 attccggttc atcagttttt taataaactt ggtagtatta ttaatgtaat atgtgcttct
      781 agtaagcgtc acgatgagct acaaaaatct atggctttag agattaaacg tttattggaa
      841 catggtgaaa ttcaagcatg taagggtgca aatcagattg ggaccttgaa acgatcagtt
      901 ttggagggta taactgaaga cagctccgta tattctcaac gtgctgatgc tgatgaggcc
      961 ttcatttatt tgacatcgtt tgagtttgtt tttatcttac acttgatgaa ggaaataatg
     1021 ggaaggacta atatttga
//
LOCUS       XM_071832734             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842615), mRNA.
ACCESSION   XM_071832734
VERSION     XM_071832734.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139842615"
                     /note="uncharacterized LOC139842615; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842615"
     CDS             1..645
                     /gene="LOC139842615"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688835.1"
                     /db_xref="GeneID:139842615"
                     /translation="MPDISAMYKSGRYRPRQKDNHVTVEHFYRVDIFISALDKQSHEL
                     PFRFDNNNATEILTLSSALVPRKDSDMLNTDQICSLVEKYYPLDFIEQEIIRLRYELE
                     LFNIEKSNDQKLSDISTISELCRILVKSNKCEAYGLIERLTRLILTLSVSTATTERAF
                     SAMKLCKNRLRNKMSDDFLASNLVVYIEKEIAELFDSTSLMDEFKDLKGRRAQL"
     misc_feature    <406..573
                     /gene="LOC139842615"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atgcctgata ttagtgctat gtataagtct ggtcgatatc gccctcgtca aaaagacaat
       61 catgttactg ttgagcattt ttatcgagta gatatattta ttagtgcact ggacaaacaa
      121 tcacatgagt tgccttttag atttgataat aataatgcca ctgagatatt aactcttagc
      181 tctgctttag tccctagaaa ggactcggat atgttaaata ctgatcagat ttgctcactt
      241 gttgagaagt attatcccct cgattttatt gagcaagaaa ttatccggtt gaggtatgaa
      301 ttagagttgt tcaatattga gaagtcaaat gaccaaaagc tatctgacat ttctactatt
      361 tctgagctat gtagaatcct tgtaaaaagt aataaatgtg aggcatatgg tttgattgaa
      421 agattaacgc gactcatttt gacactttcg gtttccactg ctacaaccga gagagcattt
      481 tcagccatga agttatgtaa gaatcgactt cgaaataaga tgtctgatga ttttcttgca
      541 tcgaatttgg tggtttacat cgaaaaagaa attgcagaat tgtttgattc aacgtctcta
      601 atggatgagt ttaaagacct taagggtcgt cgagctcagt tgtag
//
LOCUS       XM_071832735             780 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842616), mRNA.
ACCESSION   XM_071832735
VERSION     XM_071832735.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..780
                     /gene="LOC139842616"
                     /note="uncharacterized LOC139842616; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842616"
     CDS             1..780
                     /gene="LOC139842616"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688836.1"
                     /db_xref="GeneID:139842616"
                     /translation="MGRTNILSQELQKKTQDIGNAIKLVSTIKVSLNDFRKNGWECFF
                     KHVKDLCAKQNIEMPDISAMYKSGRYRPRQKDNHVTVEHFYRVDIFISALDKQSHELP
                     FRFDNNNNATEILTLSSALVPRKDSDMLNTDQICSLVEKYYPLDFIEQEIIRLRYELE
                     LFNIEKSNDQKLSDISTISELCRILVKSNKCEAYGLIERLTRLILTLSVSTATTEGAF
                     SAMKLCKNRLRNKMSDDFLASNLVVYIEKEIAELFDSESNG"
     misc_feature    <580..747
                     /gene="LOC139842616"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atgggaagga ctaatatttt atctcaagaa ttacaaaaga aaacccaaga tattggcaat
       61 gccattaagt tagtgtcaac aataaaggta agcttgaacg acttcagaaa gaatggatgg
      121 gaatgtttct ttaaacatgt aaaagattta tgtgccaaac aaaatattga aatgcctgat
      181 attagtgcta tgtataagtc tggtcgatat cgccctcgtc aaaaagacaa tcatgttact
      241 gttgagcatt tttatcgagt agatatattt attagtgcac tggacaaaca atcacatgag
      301 ttgcctttta gatttgataa taataataat gccactgaga tattaactct tagctctgct
      361 ttagtcccta gaaaggactc ggatatgtta aatactgatc agatttgctc acttgttgag
      421 aagtattatc ccctcgattt tattgagcaa gaaattatcc ggttgaggta tgaattagag
      481 ttgttcaata ttgagaagtc aaatgaccaa aagctatctg acatttctac tatttctgag
      541 ctatgtagaa tccttgtaaa aagtaataaa tgtgaggcat atggtttgat tgaaagatta
      601 acgcgactca ttttgacact ttcggtttcc actgctacaa ccgagggagc attttcagcc
      661 atgaagttat gtaagaatcg acttcgaaat aagatgtctg atgattttct tgcatcgaat
      721 ttggtggttt acatcgaaaa agaaattgca gaattgtttg attcagagtc taatggatga
//
LOCUS       XM_071832736            1732 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842617), mRNA.
ACCESSION   XM_071832736
VERSION     XM_071832736.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1732
                     /gene="LOC139842617"
                     /note="uncharacterized LOC139842617; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842617"
     CDS             845..1732
                     /gene="LOC139842617"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688837.1"
                     /db_xref="GeneID:139842617"
                     /translation="MDIDVHHSVSLRASRRPDRLNDNFDNKGGDGFVDGDKSFSNYPT
                     IIIWKRGIVRLLLAGGIMWMLLILAVLLFHIWSCQSSLVFLSATCNKDSTIYHMLHIM
                     GLVTPPHRCSIPLASDPEKVVIPEKRFPSKFVQSLSYFEVDDNANTTGSDSFPLFGGH
                     QSWKQRDDSFKLKSSMKVHCGFMRDGGADMSLKDIEYVKKCKFVVASGIFDKYDTPHQ
                     PSNVSPQSKKLFCFLMVVDEISLKFIKQNFTVKEDNNGGEWVGIWRIILQASERTGYS
                     PTSTKHISHELPHYSKTNW"
     misc_feature    1289..>1645
                     /gene="LOC139842617"
                     /note="Protein of unknown function (DUF616); Region:
                     DUF616; pfam04765"
                     /db_xref="CDD:428112"
ORIGIN      
        1 aaatgtaaat aacgatgtag aaaacataca aaatttatag cagaatgtac aagtgctaaa
       61 gttagcttat tagaaatggt ggttgtcgtt ggcctctgct tttgtatact ctgtatcagt
      121 tatttattta aaggtacaac accttttgca caatgtacaa gtgtttatat gtatagattt
      181 ttgaagagag agaaaaaact catcatagag aattgagaaa aaaatgaacg attgatgtga
      241 tttgactgtg tgatatgata attgtagaca agctaaaatg gtaagaccaa tttttaccat
      301 tttcgaactt ttttggaccg tccaaatagt aggactcttt ttaaatttta aaaagaattc
      361 agcaattaca agtaaatatt caagatacac aactttcaat aaattatgcc ctaaagcctc
      421 taatagcaat aaaaaactac aaatttctct tgaatccaca taaaatgggg ttcacaacaa
      481 aatatcgata agatatcaag ctaacccagc catttgggat gaaatacggt cagaaactct
      541 cgttgagaaa acgcatcttc ctctcttttt gaataaaact ctgtaacaaa atgtaaagcc
      601 taacttgatc tgattttgtc ggatatttat aaacccaaat taataccaca aaatcattcc
      661 gtcttcttac acatttatag attattcgaa tcaatacccc ttgctttaga tcttttaata
      721 ttgattcaaa cctcgtaaat attaccgtca gttgcattcc cgataaacca ctgcaaacgt
      781 caatttctta ccagttttgg atcgttcaat ttactttgat gttaaatgta atagagctgt
      841 aagtatggat atcgacgttc accattccgt ttccttacga gcaagccgta gacctgaccg
      901 tttaaatgat aacttcgata ataaaggtgg agatggtttt gtcgatggag acaagtcatt
      961 ctcaaattac ccgaccataa ttatctggaa aaggggaatt gttcgtttgc tactagcggg
     1021 tggtattatg tggatgctgc tcattctagc tgtactatta tttcatatat ggagttgcca
     1081 atcttctctt gttttcctct cagctacctg taataaagac agcacgatat atcatatgct
     1141 acacataatg gggctagtaa caccgccaca tcgctgttca attcccttag ccagtgaccc
     1201 ggagaaagta gtcattccgg agaaaaggtt tccttcaaag tttgtgcaaa gtctatccta
     1261 ctttgaggtt gatgacaatg caaacacaac tggatcagat tcttttccac tatttggtgg
     1321 gcatcaaagt tggaaacaaa gagacgatag tttcaagcta aaatcgagca tgaaggtgca
     1381 ttgtgggttt atgcgagatg gtggtgcaga tatgtccctc aaagacattg aatatgtcaa
     1441 gaaatgtaaa tttgtggttg catctggaat cttcgataag tatgatacac ctcatcaacc
     1501 atcaaatgta agtccacaat cgaagaagtt gttttgcttt cttatggtgg tggatgaaat
     1561 atctcttaag tttatcaagc aaaattttac ggttaaagaa gataataacg ggggagaatg
     1621 ggtcggaata tggcgcatta ttctgcaagc atctgaaagg accggttata gcccaacaag
     1681 caccaaacat ataagccatg agctcccaca ttactctaaa actaattggt ag
//
LOCUS       XM_071832738             741 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable hexosyltransferase
            MUCI70 (LOC139842618), mRNA.
ACCESSION   XM_071832738
VERSION     XM_071832738.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..741
                     /gene="LOC139842618"
                     /note="probable hexosyltransferase MUCI70; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842618"
     CDS             1..741
                     /gene="LOC139842618"
                     /codon_start=1
                     /product="probable hexosyltransferase MUCI70"
                     /protein_id="XP_071688839.1"
                     /db_xref="GeneID:139842618"
                     /translation="MSLYVDLDIYPQPMWDWHLPYDEPRRNGKIPKILTHRLFPQAIY
                     SIWIDGKMELIVDPLLMLERYLWRGKHTFAIAQHKHHKNIYEEADSNKRRKRYARPLI
                     DRHMKIYRYEGLEPWSPLKQTISEGDIIIREHTPLNNLFSCLWFNEVNLFTPRDQLSF
                     GFVVYRLNGQFKFFMFPNCEHNSLSMLHPHTREHSSKIDWVKFFNEFKGNNSSLKESR
                     GGLGLWSPYLADLNSIVLPPVARTSKAG"
     misc_feature    <52..570
                     /gene="LOC139842618"
                     /note="Protein of unknown function (DUF616); Region:
                     DUF616; pfam04765"
                     /db_xref="CDD:428112"
ORIGIN      
        1 atgagcttat atgttgatct tgacatttat ccccaaccaa tgtgggattg gcatctaccg
       61 tatgacgagc ctagaaggaa tgggaagatt cctaagatat tgactcatag gctttttcct
      121 caagctattt acagtatctg gattgatggg aaaatggagc taattgttga cccgttgctt
      181 atgttggaga gatatctttg gcgtgggaag catacatttg ccatagctca gcacaagcat
      241 cataaaaata tctatgagga ggctgattct aacaaacgaa gaaagcgata cgctcggcct
      301 ttaattgatc gccacatgaa aatttatcgc tatgagggat tggaaccttg gagcccatta
      361 aagcaaacta taagtgaagg ggatataatc atacgtgaac atactccact aaataactta
      421 tttagctgtt tgtggttcaa cgaagtaaat ctatttacac caagagatca gttgagcttt
      481 gggttcgttg tctacagact aaacggccaa tttaagttct tcatgttccc aaattgtgag
      541 cataattctt tatctatgct gcacccacat acacgtgaac attcttctaa aatcgattgg
      601 gttaaattct ttaacgagtt taaaggcaac aacagtagtt taaaagaaag cagaggagga
      661 ttagggcttt ggtcacccta tcttgccgat cttaattcga ttgtacttcc acccgtagca
      721 agaacatcca aagctggata a
//
LOCUS       XM_071832739            2142 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842619), mRNA.
ACCESSION   XM_071832739
VERSION     XM_071832739.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2142
                     /gene="LOC139842619"
                     /note="uncharacterized LOC139842619; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842619"
     CDS             1..2142
                     /gene="LOC139842619"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688840.1"
                     /db_xref="GeneID:139842619"
                     /translation="MRRMMVDIPIPQKWKRLWDTWDLRSFIILSLCLQTFLILVAPLR
                     KKTKSNWIVMSLWSAYVLADSAANFAVGLISNSQGNPISEGRTPVENEDLLAFWAPFL
                     LVHLGGPDTITAFALEDNELWLRHLLGLVFQCVAAVYVFVQSLPHNRLWIPTMLMFVT
                     GIIKYAERTRSLYLASADRFKDSVPSLLFFGPQYEIVLDTEKKASPGNLTELEVVQYG
                     YENFQKIKGLIVNITFSSQRRDKSREFFLNRTAKDAFKVVEVELNFIYDVLFTKLPVV
                     FGSVGAISRFFSLATVCSAIVLFTLKNKSNFREADVNITYGLLFGALILDMIALIMLL
                     LSDWTIISLRKSPHAELDKSLKTKIVTYFLRLMTQQATVRDTKDEPQYPKPFLKRRWS
                     ETVSTYNLITYCLYPRPKLWQSVYDKLGISLFLDGIFNVKSEKFTSKLGDFIFEELKS
                     KSEIAESLETATIISSAQGDWVLEKEDGWSSLLEYFEDIDYDQRLILWHITTELCYNY
                     ELNDEFKRIDSVNANKDKREIAKLLSDYMMYLLIMQPSMMSAIAGSGEIWFRHTCDEA
                     RRIFEDGGKSIKPKKLQNIFQGAGDIEFDLKKINACIEILNKSEEIEKAGSYSFRDKM
                     SLLFHGSMIAKDVMEIEKKEPKLNKWCIISKVWVELLCYGASHSRATAQAAQVSKGGE
                     LITIVWLLMTHFGLGYNFQIMEGQAGVRVTR"
     misc_feature    172..1203
                     /gene="LOC139842619"
                     /note="Domain of unknown function (DUF4220); Region:
                     DUF4220; pfam13968"
                     /db_xref="CDD:464058"
     misc_feature    1924..2088
                     /gene="LOC139842619"
                     /note="Protein of unknown function, DUF594; Region:
                     DUF594; pfam04578"
                     /db_xref="CDD:461358"
ORIGIN      
        1 atgaggagaa tgatggttga catcccaatc cctcaaaaat ggaaacggtt atgggataca
       61 tgggatctta gaagtttcat catcttgagt ctttgcttac aaacattttt aattttggtc
      121 gcccctttga gaaaaaaaac aaagagtaac tggatagtca tgtcattatg gtccgcgtac
      181 gtactagccg attcggctgc aaattttgcg gttgggctga tctcaaacag ccaaggcaac
      241 ccaatttccg aaggtagaac cccggtggaa aacgaagacc ttctcgcctt ttgggcaccg
      301 tttcttttgg tccaccttgg tgggcctgac accatcaccg cttttgcatt agaagataac
      361 gagttgtggc ttcgacatct tcttggtctc gtattccaat gtgtagctgc tgtttatgtc
      421 tttgttcagt ctcttccaca taaccggctc tggattccaa caatgttgat gttcgtgacc
      481 ggaatcatta aatatgctga gagaacacgg tcactttatc tagccagcgc tgaccgattc
      541 aaagattcag taccctcttt actattcttc ggtccccagt atgaaatagt cctcgataca
      601 gaaaagaagg ctagtccagg gaacttaacc gagctggagg tggttcagta cgggtatgaa
      661 aatttccaaa aaatcaaagg gcttattgtt aatataactt tcagtagcca gcgaagagat
      721 aaaagccgtg agttcttcct gaatcgaact gcaaaagatg cgtttaaagt ggttgaagtt
      781 gagttaaatt tcatttatga tgttctcttc acaaagctcc cggttgtgtt cggttcggtt
      841 ggagccataa gccgcttttt ttctctagcc acggtgtgtt cagcaatcgt gttattcaca
      901 ttaaaaaaca aatcgaattt tcgtgaagcc gatgttaata ttacatatgg tttgctgttt
      961 ggtgcattga ttctagatat gattgctcta attatgcttt tgctctcgga ctggaccatc
     1021 atttctctta gaaaatcccc ccatgctgag ctggacaagt ctctcaagac aaaaatcgtc
     1081 acttattttc tccgcctaat gacacagcag gccacagttc gggatacaaa agatgagccc
     1141 caatatccta aacctttctt aaaacgaaga tggtctgaaa cggtatcaac ttacaacctt
     1201 attacatact gcttgtaccc tcgtcccaag ttatggcaat ctgtgtatga caaattgggg
     1261 attagtttgt ttcttgatgg catctttaat gtgaagtccg aaaagttcac ttcaaagctt
     1321 ggagacttca tttttgaaga gctaaaatca aaatctgaaa tagctgaaag cttggaaacg
     1381 gctacaataa taagttcggc ccaaggagat tgggtgcttg aaaaagaaga tggttggagt
     1441 agcttactag aatattttga agatattgac tatgatcaaa gactcatttt atggcacatt
     1501 accaccgagt tatgctacaa ttatgaactc aatgatgagt tcaagcgcat tgattctgtg
     1561 aatgccaaca aggataaacg agagatagca aaactattgt cggattacat gatgtatctt
     1621 cttattatgc aaccaagcat gatgtcagca atagccggtt caggagaaat ttggtttcgt
     1681 cacacttgtg atgaggcaag aaggattttt gaagacggag gaaaaagtat aaaaccaaag
     1741 aagcttcaaa acatttttca aggagccggg gatatagagt tcgatttaaa gaagataaat
     1801 gcttgtattg agattctcaa taagtctgaa gaaatagaga aggctggatc atattctttt
     1861 cgagataaga tgtcgttgtt atttcatggt tccatgatag ctaaagacgt gatggagata
     1921 gagaagaaag agccaaaact gaataagtgg tgtattataa gcaaggtttg ggtcgagttg
     1981 ttgtgttatg gtgcgagtca ttcacgagcc acagctcaag cagcacaagt gagtaaaggt
     2041 ggtgagctga ttactatagt ttggttgttg atgacgcatt ttggtttagg gtataacttc
     2101 caaatcatgg aaggtcaagc aggagtgaga gtcactaggt aa
//
LOCUS       XM_071832740             912 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842620), mRNA.
ACCESSION   XM_071832740
VERSION     XM_071832740.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..912
                     /gene="LOC139842620"
                     /note="uncharacterized LOC139842620; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842620"
     CDS             1..912
                     /gene="LOC139842620"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688841.1"
                     /db_xref="GeneID:139842620"
                     /translation="MIALKCQFGGEPQEDANEHIRIFLQICGLFKFTNVHDHVIYLKL
                     FPWSLKGEDRVWLNSFPEADCCDLVLNTGLDTFAKVQTFYKGCVISTRITIDQEVGGS
                     LMNKTEEEAYEIIENGQVENTNRSLKRILEKTVGSNPKEWSNELDDALWAFRTAYKTP
                     IGTTPFRLVYGKAYHLPLEIEHKAHWALRTCNLDYHEAGHLRLTQLNELDELRHDASE
                     NSLMYKEKTKRWHDNRIKGPKEFKEGNRVLLYNSRFKLSPGKLKSRWSGPFVVRKLGD
                     GLHAWYSSRETVVISRGDGYGDHEFVS"
ORIGIN      
        1 atgattgcgt tgaaatgtca gtttggaggg gaaccacaag aggatgctaa cgagcatatt
       61 cgtatttttc tgcagatttg tgggttgttt aagttcacta atgtccacga tcatgtcatt
      121 tatttgaagc ttttcccatg gtctttgaag ggtgaagata gagtttggtt aaatagtttt
      181 cctgaagccg attgttgcga tcttgtcctc aacacggggt tagatacttt tgctaaggta
      241 caaacctttt ataagggatg tgtcatcagt actcgtatta ctattgatca agaagtagga
      301 ggtagtctca tgaacaaaac cgaagaggag gcgtatgaga taattgagaa tgggcaagtg
      361 gagaacacca atcggtcact taaacgaatt cttgaaaaga ccgttggttc aaatcctaag
      421 gaatggtcca acgaacttga tgatgcattg tgggcatttc gtaccgccta caaaactcct
      481 atcgggacca ctccttttcg cttggtttat ggcaaagcat atcatctccc gttggagatt
      541 gagcacaaag cacattgggc tcttaggaca tgcaatcttg attatcatga ggcgggtcac
      601 cttaggttga cccaattgaa tgaattagat gagttgaggc acgatgcctc tgagaactca
      661 ctcatgtata aggaaaagac aaagaggtgg catgacaatc ggatcaaagg tccgaaagaa
      721 tttaaggaag gcaaccgtgt ccttctttat aattcgcgtt tcaaattgtc accggggaag
      781 cttaagtccc gttggtcggg accgtttgtg gttaggaagt tgggtgatgg gttgcacgcc
      841 tggtatagca gcagggaaac agtagtaata agtcgtggtg acggttatgg tgatcatgag
      901 tttgttagtt ga
//
LOCUS       XM_071832741             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842621), mRNA.
ACCESSION   XM_071832741
VERSION     XM_071832741.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139842621"
                     /note="uncharacterized LOC139842621; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842621"
     CDS             1..588
                     /gene="LOC139842621"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688842.1"
                     /db_xref="GeneID:139842621"
                     /translation="MTAVLRQLAYGYTPDALDEYLQMSERVGRESLHNFCKCIIDLYA
                     NVYLREPMLHDIHRLYEGHIRIHGFPGMLGSIYCMHWAWAKCPVAWRGQYMRGDHSHP
                     TIMLEAVASDLFNSMLNEEMPDVPYHINGVQYRRGYYLADGIYPTWAAFVKGFSSVVD
                     KKRSYFTKKQAGARKDVERTFGILQGRWYILQQPA"
     misc_feature    139..585
                     /gene="LOC139842621"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgacagccg tactacgtca gctagcatac ggttatacac cggatgcgtt ggatgagtat
       61 cttcaaatgt ctgaacgagt tggacgggaa tctctacaca acttttgtaa gtgtatcatt
      121 gatttgtatg ctaatgtcta tctaagagag cctatgttgc atgacattca tcgtttgtat
      181 gaaggtcata taaggattca tggttttccg ggcatgttag gtagtatata ttgtatgcac
      241 tgggcatggg caaaatgtcc ggttgcgtgg agagggcagt atatgcgagg cgatcacagt
      301 cacccaacta ttatgcttga agcagtcgcc tctgatttgt tcaactcaat gcttaatgag
      361 gaaatgcccg atgttcctta tcacataaac ggtgttcaat acagaagagg gtactattta
      421 gctgacggta tttacccaac atgggcggca tttgttaagg gattttcaag tgtcgttgac
      481 aaaaaacgtt cttactttac aaagaaacaa gcgggcgctc gcaaagatgt tgaaagaact
      541 tttgggatcc tacaaggtcg ttggtatatt cttcagcaac ccgcatga
//
LOCUS       XM_071832742             435 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842622), mRNA.
ACCESSION   XM_071832742
VERSION     XM_071832742.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..435
                     /gene="LOC139842622"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842622"
     CDS             1..435
                     /gene="LOC139842622"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688843.1"
                     /db_xref="GeneID:139842622"
                     /translation="MGSIIEHNVPPPLADPSLFVYKHCACLLYLLIYVDDIILTGNSA
                     ATYHKFITILYTEFAIKDLGKLSYFLGLEVNQFLHALTYDQLQVVKPILRYDKGTITY
                     DLSFHQAIKPSVLGYSDANWARYIETQRSTYGYSFSPYYCSL"
     misc_feature    <10..228
                     /gene="LOC139842622"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    346..>411
                     /gene="LOC139842622"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggggtcaa ttatagagca taacgtccct ccgcctctgg ctgatccatc tttatttgtt
       61 tacaaacatt gtgcatgtct tctttatttg ctcatctatg ttgatgatat cattctcact
      121 ggaaactctg cggctaccta tcacaaattt attaccatat tatacaccga gttcgcaatc
      181 aaagatcttg gtaagttgag ttactttctt ggacttgagg tcaaccaatt tcttcatgct
      241 ctcacatatg atcagcttca agttgtcaaa cccatcctcc gatatgataa aggcactatt
      301 acttacgacc tttcttttca tcaagctatt aagccttccg ttcttgggta ttcggatgct
      361 aattgggctc gctacattga gacacagcgt tctacttatg gttattcttt ttctccctac
      421 tattgctcgt tatag
//
LOCUS       XM_071832743             468 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842623), mRNA.
ACCESSION   XM_071832743
VERSION     XM_071832743.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..468
                     /gene="LOC139842623"
                     /note="uncharacterized LOC139842623; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842623"
     CDS             1..468
                     /gene="LOC139842623"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688844.1"
                     /db_xref="GeneID:139842623"
                     /translation="MANTPKYHPALSISNIKNIIPITLDIKNGQYNSWSQLFKIHCRA
                     YDVIHHIIPAVSAADSSSTTTDTSNDDPSWSRLDAIVLQWIYGTISNELMGTIMEDDQ
                     TAVQAWTRIQSVFQDNKNTRALYLQRQFTNIKLDDYPDVSSYYQEIKALAEIN"
     misc_feature    250..>459
                     /gene="LOC139842623"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggctaata caccaaaata tcaccctgca ctttcaatct ccaacatcaa aaacattatt
       61 cctatcaccc tcgacatcaa aaatggtcaa tataattctt ggtctcaatt gtttaagata
      121 cattgtcgtg cttatgatgt gattcatcac atcatacccg ctgtttctgc tgcagactct
      181 tcttccacga ccacagacac ctcaaacgat gatccctcgt ggtctcgttt agatgctata
      241 gtccttcaat ggatatatgg cacaatctcc aatgaattga tgggtaccat tatggaagat
      301 gatcaaacgg ctgttcaagc atggacccgt attcaaagtg tgtttcagga caacaagaac
      361 acacgtgcgt tgtatctaca acgtcaattc acgaatatta agctcgatga ttatccagat
      421 gtctcctcat actatcagga aatcaaagct ctcgccgaga tcaactag
//
LOCUS       XM_071832744             543 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842625), mRNA.
ACCESSION   XM_071832744
VERSION     XM_071832744.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..543
                     /gene="LOC139842625"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:139842625"
     CDS             1..543
                     /gene="LOC139842625"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688845.1"
                     /db_xref="GeneID:139842625"
                     /translation="MKDLGPISNFLGISVHHTPTGLFLNQSKYAKEILERADTYSCKP
                     ANTLVDVKSKLSSHAGNVYNNPTLYRSLVGALQYLKFTRPDISYSVQQICLHMHHSHD
                     THMAALKKILRYIKGTLHYGIYMSKSSTSTLVSYTDADWAGCPDTRNSTSGYCMYLGD
                     NLVSWSSKRQPTISRSSTGA"
     misc_feature    <1..141
                     /gene="LOC139842625"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    406..>540
                     /gene="LOC139842625"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaagatc tcggtcctat cagtaatttt ttgggcatct cagttcatca tacacccact
       61 ggattatttt tgaaccaatc aaagtatgca aaagaaatat tagaaagagc agacacgtac
      121 tcatgcaaac cagcgaacac ccttgttgat gtcaaatcga aattaagtag tcatgctggt
      181 aatgtttaca ataatcctac tctttatagg agcttggtcg gtgccttaca atacctcaag
      241 ttcactcgtc ctgacatatc atactcggtt caacaaattt gtcttcatat gcatcactcg
      301 catgacactc atatggccgc tcttaagaaa atattacgat acatcaaggg cacgctacat
      361 tatgggattt atatgtctaa atcaagtaca agcacacttg tttcttacac tgatgccgac
      421 tgggctgggt gcccggacac tcgcaattcc acatccggct attgtatgta tcttggggat
      481 aacctggtct cctggtcatc taaacggcaa ccaaccatat cacgatctag taccggggcc
      541 tag
//
LOCUS       XM_071832745             423 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842626), mRNA.
ACCESSION   XM_071832745
VERSION     XM_071832745.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..423
                     /gene="LOC139842626"
                     /note="uncharacterized LOC139842626; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842626"
     CDS             1..423
                     /gene="LOC139842626"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688846.1"
                     /db_xref="GeneID:139842626"
                     /translation="MAGGRVGELIRKYGKVAVGVHVSVSAASITGLYIAIKNNVDVES
                     VLEHIRFKQLESVLEKVGMGGPKDDVEISDSTVNDSNSEMKQKNRTAELAASSGGALA
                     LAVLCNKALFPVRVPITVALTPPIARFLARRQIIKISK"
     misc_feature    13..375
                     /gene="LOC139842626"
                     /note="FAM210A/B-like domain; Region: FAM210A-B_dom;
                     pfam06916"
                     /db_xref="CDD:429191"
ORIGIN      
        1 atggccggag gtagagtcgg tgagctaata agaaaatacg gaaaagtcgc tgtcggcgta
       61 cacgtttctg tttccgctgc aagcatcacc ggattataca tcgcgatcaa aaacaacgtc
      121 gacgttgaat ccgttttaga acatatccga tttaaacaac tcgaatcggt tctcgagaaa
      181 gtcggtatgg gcggacctaa agatgatgtt gaaatttcag attcaactgt gaacgattcg
      241 aattctgaaa tgaagcagaa gaatcggacg gcggagcttg cggcgtcgag cggtggtgca
      301 ttggcgctgg cggtgctgtg taataaggct ttgtttccgg ttagggttcc gattacagtt
      361 gcactgacgc ctccaattgc taggtttttg gcaaggaggc agataattaa aattagtaaa
      421 tga
//
LOCUS       XM_071832746             522 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842627), mRNA.
ACCESSION   XM_071832746
VERSION     XM_071832746.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..522
                     /gene="LOC139842627"
                     /note="uncharacterized LOC139842627; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139842627"
     CDS             1..522
                     /gene="LOC139842627"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688847.1"
                     /db_xref="GeneID:139842627"
                     /translation="MSVSIIIKEETFTVISAYAPHAGLSDAKKKSFWDFLDEVVRGFP
                     ADHRLIIGGDLNGHIGAEAEGYEEAHGGFGFGPRNEEGRSILEFSIAHELVVANSFFK
                     KRDAQLATFHSGGRSTQIDFFLLRKGELRACRYCKVLPALTCSSQYRLMVMELVTQGR
                     VGRRVRVVQPRIL"
     misc_feature    <1..465
                     /gene="LOC139842627"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(52..54,166..168,442..444)
                     /gene="LOC139842627"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtcggtta gtataattat taaggaggag acttttacgg tcattagcgc atacgcacct
       61 catgcgggtt taagtgatgc gaaaaagaag agtttttggg attttttaga tgaggtagtg
      121 agggggttcc cagctgacca tcgactgatt atagggggtg atctgaatgg acacatagga
      181 gcggaggcag aaggttacga ggaagcccat gggggctttg ggtttggtcc tagaaatgaa
      241 gaagggcgct caattcttga gttttccatt gcccacgagt tggttgtagc aaactctttc
      301 ttcaagaaga gggatgctca gttagccact tttcatagcg ggggtcgtag cacccagatt
      361 gacttttttc tccttcgtaa aggggaactt agggcatgta ggtactgtaa ggtccttcca
      421 gccttgacgt gctcctccca gtatagattg atggtcatgg aactagtcac tcaaggaaga
      481 gtcggcagga gggtcagggt tgtgcaacct agaatccttt ga
//
LOCUS       XM_071832747             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842628), mRNA.
ACCESSION   XM_071832747
VERSION     XM_071832747.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139842628"
                     /note="uncharacterized LOC139842628; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842628"
     CDS             1..846
                     /gene="LOC139842628"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688848.1"
                     /db_xref="GeneID:139842628"
                     /translation="MEACFRTTRCPGKFKTTFGTSMFRGVAKRLWIDLLAIKGSYYPD
                     KITWEEFKVEFFKNFRSKAEVERLKTKLQNTRQKSMDLITFRAHFIDRFQFSPEYVSN
                     EMSKCRLFHSLLRDEIRKRIIISQFHSFTALFDAARYIDDELTKEGIIMQNKESYTSK
                     RRFEQNVSPSKKIKCGEDMKSGGGEIPLCVCFNCGKPSHIAKNCGVAIPRSIICFHCN
                     HVGHKKVECPLLSKSERKEEHRKEVIRRIEKSEGTPRGRSLSNTDSQLEVEIVSGKAM
                     LFVGV"
     misc_feature    58..348
                     /gene="LOC139842628"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    571..>684
                     /gene="LOC139842628"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
ORIGIN      
        1 atggaagcat gttttagaac aacccgatgt cccggcaagt ttaagaccac atttgggacg
       61 agtatgttta gaggggttgc gaagagattg tggattgact tgttggctat taagggaagt
      121 tattatcctg acaaaataac ttgggaagaa ttcaaagttg agttcttcaa gaacttcaga
      181 tcgaaagctg aagtagaacg gttgaaaacc aagttacaaa acacccgcca aaagtctatg
      241 gatttgatca catttcgagc ccatttcata gaccgatttc aattcagtcc tgaatatgtt
      301 agtaatgaga tgagcaagtg taggttgttt cacagtttgt tgcgagatga gattaggaag
      361 agaattatta tatctcagtt tcattctttc accgcgttgt ttgatgcggc aagatatata
      421 gatgacgaac ttacaaagga aggaattatc atgcagaaca aggaaagtta tacttctaaa
      481 agaaggtttg agcaaaatgt ttcaccgagt aaaaagataa agtgtggtga agatatgaag
      541 agtggaggag gagaaattcc actttgtgtg tgttttaact gtggaaagcc aagtcatata
      601 gctaaaaatt gtggggttgc aataccaagg tcaataatat gtttccattg caaccatgta
      661 ggccataaaa aggttgagtg tccgttattg tcaaagtctg aaagaaagga ggaacataga
      721 aaagaagtga tacgaaggat agaaaagtcg gagggtactc cgagaggaag atcgttgtca
      781 aataccgact ctcagttaga agttgagata gtgagtggta aggctatgtt gttcgtaggt
      841 gtatag
//
LOCUS       XM_071832748            1173 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842629), mRNA.
ACCESSION   XM_071832748
VERSION     XM_071832748.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1173
                     /gene="LOC139842629"
                     /note="uncharacterized LOC139842629; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842629"
     CDS             1..1173
                     /gene="LOC139842629"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688849.1"
                     /db_xref="GeneID:139842629"
                     /translation="MARQKSRVKWALEGDENTKYFHSFIKRRHSKRNIRGLNVRGGWT
                     DDPTIIKQEVFRHFKAQFEKRNENKMKLAACTLNDTDQALLLCLSNDQSSALEGIFTE
                     KEVFEAISECSCSKAPVPDGFNFKFFKMHWELIKQDLINALIRLVKIARSHTVATPSA
                     RVNSQFGLGVLKSEVEYLENKVSCKVGEFPFIYVGLPIGRNMNRIESWKPVIEKYNSR
                     LANWKARMVSYGGRLTLIKSVLSSLPLYFFSLFRAPLSVIDNLECIRRKFFWGGTSEG
                     SKLSWVKWDEALLPYGEGGHNIGSLRGKNLALLGKWFWRIKTEPNLLWVAVLKSIHIS
                     NGLLPPLGLNRPKGKSGVWFNILRAGYDIEKLGINFASSFMNSFGNGAETKFWEDP"
ORIGIN      
        1 atggcaagac aaaaatctcg tgttaagtgg gcccttgaag gtgacgaaaa taccaaatat
       61 tttcactcct tcattaaaag aagacactca aaacgaaata ttcgaggtct taatgttaga
      121 gggggctgga ctgatgatcc cacaatcatt aaacaagaag ttttcaggca cttcaaagca
      181 caattcgaaa aaagaaacga aaacaaaatg aaactagcag catgtacact gaatgataca
      241 gatcaggccc ttcttctatg cttatcaaac gatcagtctt ctgccctaga agggatattc
      301 acagaaaaag aagtgttcga agccattagt gagtgcagtt gttcgaaggc cccggtgcct
      361 gatggtttta attttaagtt cttcaagatg cattgggaat tgattaagca ggatcttatt
      421 aatgccttaa ttcgtttggt gaaaattgcg agatctcata cagttgcaac gccttccgct
      481 agggttaact cacaatttgg attaggggtg ttgaaaagtg aagttgagta cttggaaaat
      541 aaagtcagtt gcaaagttgg cgagttcccg ttcatttatg taggtctccc aatcggtcga
      601 aatatgaaca gaatagaaag ttggaaacct gtgatcgaaa aatacaactc aagactcgcg
      661 aattggaaag ctcggatggt ttcttatggt ggaaggttaa cgctaattaa atcggtctta
      721 agtagtttac cgctatactt tttttcactc tttcgtgctc ctttgagtgt cattgataac
      781 cttgagtgta ttagacgtaa attcttttgg ggtgggacga gcgagggttc taaattgtct
      841 tgggttaaat gggatgaggc tcttttacct tacggtgaag gagggcacaa tatcgggtcc
      901 ttaaggggca aaaaccttgc gctcttgggg aaatggtttt ggagaattaa aaccgagcca
      961 aacttacttt gggtggcggt tttaaaaagt atccacatat ctaacgggct actcccacct
     1021 ttgggcctaa accgcccgaa agggaagagt ggcgtttggt ttaatatttt gcgtgcagga
     1081 tatgacatcg agaagctagg aatcaacttt gctagctcgt ttatgaattc gtttggaaac
     1141 ggagcagaga ctaaattttg ggaagatcca tag
//
LOCUS       XM_071832749             831 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842630), mRNA.
ACCESSION   XM_071832749
VERSION     XM_071832749.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..831
                     /gene="LOC139842630"
                     /note="uncharacterized LOC139842630; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842630"
     CDS             1..831
                     /gene="LOC139842630"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688850.1"
                     /db_xref="GeneID:139842630"
                     /translation="MLQENVIGDEKLCVISDQHQGILHAMGAQTYGWEHRYCLCHIRS
                     NLLSKHTKVKSLKRLCWTVGSTTNQILYKNAFRAIKQASVEAWQYLKDADVGKWTVYR
                     DSQRSRWGNTMTNIAESLNNVFRHARMMPIKACIEYTFDYTRQHFYDQSREARLCNSP
                     LSKYMFNIFNEWAKRAQRYKTTCYHEEQGIYKVHSTYQRSGEGGTDYTVEFKRKRCSC
                     GIWQHQRLPCSHAISVCSHLNEDINKQISKKYTTPTWREQYSDHFNPLRDASYWTHIE
                     "
     misc_feature    <4..135
                     /gene="LOC139842630"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    640..723
                     /gene="LOC139842630"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgctccaag aaaatgttat tggagacgaa aagttgtgtg tcatctctga tcaacaccaa
       61 ggtatcttac atgcaatggg tgctcaaaca tatggttggg aacataggta ctgcttgtgc
      121 cacattcgta gtaacttgtt gagcaaacac actaaagtga aatcgctcaa acgcttatgt
      181 tggacagtcg gttcaacaac aaatcaaata ttgtacaaga atgctttcag ggccatcaaa
      241 caagctagtg ttgaggcttg gcaatatttg aaagatgctg atgtaggcaa atggactgtg
      301 tatagggaca gtcagaggag tcgttggggt aacacaatga caaatattgc tgagtcactc
      361 aacaatgtgt tccgtcatgc ccgaatgatg ccgatcaaag cgtgtatcga atataccttt
      421 gattacacca gacaacactt ctacgaccaa agtcgagaag caaggctatg taattcacca
      481 ctttcgaagt acatgtttaa catctttaac gaatgggcaa aaagagctca acgttacaaa
      541 acaacatgtt atcacgaaga acaaggtatc tacaaggttc attcaacgta tcaaagaagt
      601 ggtgagggtg gcactgatta cacagtggag tttaaaagga aaaggtgttc atgtggtatt
      661 tggcaacacc aaagattacc ttgctctcat gccatttccg tatgtagcca tctaaacgag
      721 gatataaata aacaaattag taaaaagtat acaactccta catggagaga gcaatatagt
      781 gatcatttta atcctttaag agatgcgagc tactggacac atatagaatg a
//
LOCUS       XM_071832750             420 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842631), mRNA.
ACCESSION   XM_071832750
VERSION     XM_071832750.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..420
                     /gene="LOC139842631"
                     /note="uncharacterized LOC139842631; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842631"
     CDS             1..420
                     /gene="LOC139842631"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688851.1"
                     /db_xref="GeneID:139842631"
                     /translation="MSWVKWEDTLLPFREGGLNIGSLKGKNLALLGKWFWRAKTEPNA
                     LWVKVLKNIHGVGGLNIDSGSNEIKGKRGVWANIIRADGAIDKTGIQFGSSFVKKISD
                     GGGTCFWTDQYQCDEPLCNKFRRLYLLDTDRSCFVKD"
ORIGIN      
        1 atgtcgtggg ttaagtggga ggatacactt ctacccttta gagagggtgg acttaatatc
       61 gggtctttga agggaaaaaa tctcgcgtta ttgggaaaat ggttttggag ggcgaaaacc
      121 gagcctaatg ctctttgggt taaagtatta aaaaatatcc atggggtggg gggcttaaat
      181 attgattcgg gctctaacga gattaaaggc aaacgaggtg tatgggcaaa tattatccgt
      241 gcagatggtg caatcgacaa gacgggaatc caattcggaa gctcgttcgt aaagaaaatt
      301 agcgacggtg gaggcacttg tttctggacc gatcagtatc aatgtgatga gcctctttgc
      361 aacaaattca ggcgtcttta tttgttagat actgaccgaa gctgttttgt taaagattga
//
LOCUS       XM_071832751             489 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842633), mRNA.
ACCESSION   XM_071832751
VERSION     XM_071832751.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..489
                     /gene="LOC139842633"
                     /note="uncharacterized LOC139842633; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842633"
     CDS             1..489
                     /gene="LOC139842633"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688852.1"
                     /db_xref="GeneID:139842633"
                     /translation="MWSSLENFVCTYDVDWVLCGDYNEVKDKTERQNCEFVEGRATWF
                     NEFIDKTNLIDVSMGGKRFTRICDNCIKFSKLDRFLVSEKFRQSWGDISVMALERKLS
                     DHYPIVLRDMSIDYGLKPIKVFDEWLDLEGLAKIIKDCWDQKFEGTRADCIFRKKKIE
                     EC"
     misc_feature    <49..330
                     /gene="LOC139842633"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgtggtcga gtcttgaaaa ctttgtatgt acatatgacg tggactgggt actctgtggt
       61 gattacaatg aggttaagga taaaactgaa agacaaaact gcgaatttgt ggaaggaagg
      121 gcaacttggt tcaatgagtt tattgataag actaacctta ttgatgtttc gatgggaggt
      181 aaaagattca cgaggatatg tgataactgc attaagttta gcaaattgga tcggttcttg
      241 gtctcggaga aatttagaca atcttggggg gacatctcgg tgatggcttt agaacgtaaa
      301 ttgtccgatc attatcctat tgtgttgcgg gatatgtcca tagactacgg tcttaaaccg
      361 ataaaggtgt ttgatgaatg gctagatttg gaaggtttgg ctaaaattat taaggattgt
      421 tgggatcaga agtttgaagg cacacgtgca gattgtatat ttcgaaaaaa aaaaattgaa
      481 gagtgttaa
//
LOCUS       XM_071832753             669 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842634), mRNA.
ACCESSION   XM_071832753
VERSION     XM_071832753.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..669
                     /gene="LOC139842634"
                     /note="uncharacterized LOC139842634; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842634"
     CDS             1..669
                     /gene="LOC139842634"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688854.1"
                     /db_xref="GeneID:139842634"
                     /translation="MIDIIKTVSISGSGANKWKFSGDKSGSFVTKSMAKTIDDKLISR
                     ESNPTETIKNNLVPLKVGIFVWRVLRKRIAVRVELDRRGIDLDTLLCPLCNDVVESVD
                     HAIYSCKSAKDVWIGILKWWNLSLPSGATFEELIKGSSFPTLNSTKWKVWQAVVWVTC
                     YLIWKNRNLKVFKNDSWAPPKIIYEIQVKSFEWIQNRSRKPFPSWQQWFTRPNALDPN
                     FDPG"
     misc_feature    <160..342
                     /gene="LOC139842634"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgatagaca tcatcaaaac agtttcgata tcagggagtg gcgcaaacaa gtggaaattt
       61 tcgggtgata aaagtggatc gtttgttaca aaatcaatgg ccaaaacaat agatgacaag
      121 ttaatttcaa gagagtctaa tcctacggag actatcaaga ataaccttgt tccattaaaa
      181 gttggaatct tcgtttggag agttcttagg aaaagaatcg cggtgagagt ggaacttgat
      241 cggaggggga tcgatctaga cacattatta tgccccttat gtaatgatgt ggttgaatcg
      301 gtagatcacg ccatttactc atgcaaatcc gctaaagatg tatggattgg tatccttaaa
      361 tggtggaatc tttccctccc ttcgggggcc acttttgaag aattgatcaa gggttcgagc
      421 tttccaacac tgaactcaac taagtggaaa gtttggcaag cggttgtgtg ggtaacatgt
      481 tacttgattt ggaaaaatag aaacctcaag gtcttcaaaa atgattcttg ggcgcctccg
      541 aagatcattt acgaaattca agtgaaatca ttcgagtgga ttcaaaatcg ttcgagaaaa
      601 ccctttccgt cttggcaaca atggttcacg agaccaaacg cattagatcc taactttgac
      661 ccgggttga
//
LOCUS       XM_071832754             942 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842636), mRNA.
ACCESSION   XM_071832754
VERSION     XM_071832754.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..942
                     /gene="LOC139842636"
                     /note="uncharacterized LOC139842636; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842636"
     CDS             1..942
                     /gene="LOC139842636"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688855.1"
                     /db_xref="GeneID:139842636"
                     /translation="MPDNGKQIEDLQIAFKTSFVRNIGNGDNTSFWNDLWIGNNCLSS
                     LFPRLFRLDARTNVTVKNVVAVPGINAAVPVINDAVIDHTAPTIQVQAADSEPSSAQT
                     AAAHLIAATGFFTAVQEPVAAEGPSPEDVQRVAADRSYCWAWNRPPTGNHSEETIWNS
                     LVPKKIELFAWRAFQKRIPVRMELDKRGIDLHSVRCPLCDDDLETVDHVLIFCKHAQE
                     VWNRVFNWWKRGNFTLYSLREILRGHIDIWQAVLWSTAYFIWKNRNNKVFLDKSFNGP
                     IALSEIQICSFDWISRRTKGCTLDWCVWLTNPDSYLH"
     misc_feature    451..657
                     /gene="LOC139842636"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcccgata atggaaaaca aattgaagac ctacagattg ctttcaagac ttcattcgtg
       61 agaaacattg gcaatggtga caacacttct ttttggaatg atctttggat tgggaataat
      121 tgcttgagtt cccttttccc taggttattt cgattggatg caagaacaaa tgtcactgta
      181 aagaatgttg tggctgtccc aggaatcaat gctgctgtcc cagtaatcaa tgatgctgtc
      241 atcgaccata ctgctcctac aattcaggtt caagctgctg attctgaacc ttcttctgcc
      301 cagacagctg ctgcccattt aattgctgct acaggatttt ttacggctgt ccaggagcct
      361 gttgcagccg aaggtccttc acctgaagat gttcaaaggg ttgctgctga tcgctcttac
      421 tgctgggcat ggaaccgccc tccaaccggt aatcattcag aggaaacaat ttggaactcg
      481 cttgtaccca aaaaaataga gttgtttgct tggcgtgcgt ttcaaaaaag gattccagta
      541 aggatggaac ttgataagcg tggtattgat ctacatagcg ttcgatgtcc tttgtgtgat
      601 gatgatctgg aaacggtaga tcatgttcta atcttctgca agcatgcgca agaggtttgg
      661 aatagagtct tcaattggtg gaagcgggga aactttactc tttatagtct tcgcgaaatc
      721 cttcggggac atattgacat ttggcaagcg gtcctttggt ccactgcata ctttatttgg
      781 aaaaaccgca acaacaaagt ttttcttgat aaaagtttta atgggccgat agctctaagt
      841 gaaattcaga tatgttcgtt cgattggatc tcaagaagaa caaaaggttg tactttagat
      901 tggtgtgttt ggctaaccaa cccggattcg tatcttcatt ag
//
LOCUS       XM_071832755             909 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842639), mRNA.
ACCESSION   XM_071832755
VERSION     XM_071832755.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..909
                     /gene="LOC139842639"
                     /note="uncharacterized LOC139842639; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842639"
     CDS             1..909
                     /gene="LOC139842639"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688856.1"
                     /db_xref="GeneID:139842639"
                     /translation="MQKYLKLVQELAVDFDLFQVTQVSRTLNKKADALSKLAALTFSH
                     FKKEMWVEEVKVKSIETDGVSAAFEEEEQSWMTPIVEFLNKGTLPIDSIKARKIKMKA
                     PMYLLDKGIIYRKSFLGPHLRCLNPTQAESIIREVHEGMCALHSGHKTVAFKQMQLGY
                     YWPSLYRDATKVICKSNIHISRTPQANGQCEVTNRDIVLGIKARLGLCQRGWIDKLPN
                     VLWAHRTTPKGVTNETPFSLVYGSEDVISVEIKVPTTCIASFDESSNSEELHENLNLV
                     EERREMVTIKEAINKQRIASYYNKRV"
     misc_feature    <1..117
                     /gene="LOC139842639"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgcaaaagt atctgaaact tgtgcaagag cttgcggtgg acttcgattt attccaggta
       61 actcaggttt caagaacatt gaataaaaag gcggatgcgc tcagtaagtt agcggcctta
      121 acattcagcc attttaagaa agaaatgtgg gttgaggaag tgaaagtaaa atccattgag
      181 accgatggtg tatccgctgc atttgaagaa gaggagcaga gttggatgac accgatagta
      241 gaatttctga acaaaggtac attgccgata gattcaataa aagcaagaaa gattaagatg
      301 aaagcaccga tgtatttgtt agataaagga attatataca gaaagtcttt tttgggaccc
      361 catttacggt gtcttaatcc aactcaagcg gagtcgatta tacgggaagt acacgaggga
      421 atgtgcgctt tgcactcagg acacaaaaca gttgcgttca aacaaatgca gctcggatac
      481 tattggccgt cattgtacag agatgccacg aaggtgatat gcaaatcaaa cattcacatc
      541 agtcgcacac cccaggcgaa cggtcaatgt gaggtcacaa atcgggatat cgtgttagga
      601 atcaaagcaa gacttggatt atgccaaagg ggttggatag ataaactgcc aaatgtactg
      661 tgggcacacc gcacaactcc aaaaggcgtg accaatgaaa cacctttcag tttagtgtac
      721 gggtccgagg atgtgatatc cgtggaaata aaggtgccaa ctacgtgcat agcttccttc
      781 gatgaaagta gcaatagcga agaactgcat gaaaatctga acttagttga agaacgcagg
      841 gaaatggtga ccataaaaga agcaatcaac aaacaaagaa tcgcaagcta ctataataag
      901 cgcgtataa
//
LOCUS       XM_071832756             561 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842640), mRNA.
ACCESSION   XM_071832756
VERSION     XM_071832756.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..561
                     /gene="LOC139842640"
                     /note="uncharacterized LOC139842640; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842640"
     CDS             1..561
                     /gene="LOC139842640"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688857.1"
                     /db_xref="GeneID:139842640"
                     /translation="MGAYAEELHREANEGPSERPARAPLMYLHRDREGAGSNLWRDYF
                     CETPTFPPHKFKRHFRMRSQIFLRIIQGISECSLDPLPAHFDFFKQRPDTTGRQGFNI
                     YQMCTSALRQLAYGTTGDMFDEYLHMSEQTSLMCLYKFCLCVTDLYQQKYLRNPTAHD
                     IQRLYEHHEKHGFKGMLGSIDCMHWE"
     misc_feature    451..>558
                     /gene="LOC139842640"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgggtgcgt acgccgaaga gctacatcga gaagctaatg aaggcccaag tgaaaggccc
       61 gcaagagcac cccttatgta tcttcataga gatcgtgaag gagctggaag taatctatgg
      121 agagactatt tttgtgaaac tcctacgttt cctcctcaca aatttaagag acattttcga
      181 atgcgctcgc aaatattcct acgtatcata caaggtatat ccgaatgctc tcttgatcct
      241 ttgcccgcgc actttgattt ttttaaacaa agaccggaca ctactggtcg ccaaggtttt
      301 aatatatatc aaatgtgcac atctgcgtta cgccaattgg catatggtac aacgggggat
      361 atgtttgatg aatatttgca tatgagtgag caaacatcat taatgtgttt atacaaattt
      421 tgtttgtgtg ttactgattt gtaccaacaa aaatatctac ggaacccaac tgctcatgat
      481 attcaacgat tatatgaaca tcacgaaaaa catggtttta aaggaatgct tggaagcatc
      541 gattgcatgc attgggaatg a
//
LOCUS       XM_071832757             666 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842641), mRNA.
ACCESSION   XM_071832757
VERSION     XM_071832757.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..666
                     /gene="LOC139842641"
                     /note="uncharacterized LOC139842641; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842641"
     CDS             1..666
                     /gene="LOC139842641"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688858.1"
                     /db_xref="GeneID:139842641"
                     /translation="MEASVCNRVVVTETGATGAWDWCRNPRGRALGELSELNALIRNV
                     ALNQSKVDSWKWLLSGNGVFSTKKLTDLINGKNLQVGPSNFETIRNNLVPNKVEIFVW
                     RARRRRLAVLSELDKKGIDLHSVLCPICGFQIGGGLGTFTNLSINEIFMGNSSVQMSN
                     EDRKLWQAVDWTCGYLIWNNRNLKLFKNKCWSSPVALSDIQVKSYEWVAKMCKTKKID
                     WLG"
ORIGIN      
        1 atggaagctt cggtttgcaa tcgggttgtg gtaacggaga cgggtgctac gggagcatgg
       61 gattggtgta gaaatccgag aggtcgtgct ttgggggaac tttccgaatt aaatgcgctt
      121 atccgaaatg tggctctcaa tcaaagcaaa gttgactctt ggaagtggtt acttagtggc
      181 aatggagtct tttcaacaaa aaaattaacg gatttaatta atggaaaaaa tcttcaagtg
      241 ggtccttcaa atttcgagac aattcgtaat aaccttgtcc ctaacaaagt ggagattttc
      301 gtgtggcgag caagaagaag acggttagcg gtcttgtcgg aattggataa aaaggggatt
      361 gatcttcatt cggttctttg tccaatttgc gggtttcaaa ttggtggggg tttgggcact
      421 ttcacaaatc ttagtattaa tgaaatcttc atgggaaatt cgagtgtgca aatgtcgaat
      481 gaggatcgta aattatggca agcggtcgat tggacttgtg gatacttaat atggaacaac
      541 cggaatctaa aattgtttaa gaataaatgt tggagttcgc cggtcgcatt aagtgatatc
      601 caagttaaaa gttatgagtg ggtcgcgaag atgtgcaaaa cgaaaaagat tgattggctc
      661 gggtga
//
LOCUS       XM_071832759            2184 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842642), mRNA.
ACCESSION   XM_071832759
VERSION     XM_071832759.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2184
                     /gene="LOC139842642"
                     /note="uncharacterized LOC139842642; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842642"
     CDS             1..2184
                     /gene="LOC139842642"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688860.1"
                     /db_xref="GeneID:139842642"
                     /translation="MRHLKSIIKPWMKDKKVMEKSKRDEALDKINMIELKIEAGQDTN
                     ADHEERNILMQDIENLKRIEDMDTQQKCRLKWDAEGDENFKYFHCLLKKRRSDQMIKG
                     ITVNGEWVTEPKLIKEAFFNFYESKFMAQGCVAVWEYGSDKAPGPDGFNFAFIKKYWD
                     ILKDEVISSVAVAFNRKIMPRGMGLAFFFTLIPKVKNPSFIKDYRPISLIGVMYKIIT
                     KILAMRLVKVLDKIIGKEQSYFITGRQILDGPLILNETIEWYKRRKEKLLILKIDFEK
                     AYDTVNWEFLDYMLRILGFGTVWRSWVRMVLVSARTSILVNGSLTKEFAIRRGLRQGD
                     PISPFLFLIVMEGLHLCIKEKIRAGALSGASVGNPSITLSHLFYADDAIFISSWRRNN
                     LEAMLQILDVFHLHSGLAINIAKSAIYGIGVGEIEHNDMVSVANCSKGTIWRFVDCPE
                     SKWASVIRVIYGVDGSIDGVIHGSSVWPTIVNLFGKLKRNELLPSNVLRVKVDNGHSI
                     RFWKDNWRRNGNLGNQFNRLMHLDVNPNCLLSDRLVNNMWRWNWSRADIGPRNVSMVQ
                     QLNDVVCDIVLRDEQDRCEWTIATDRGYSVSDTRRFLDEGILPSSEISAKWWKFIPRK
                     VNILLWRLAWDRLPTRLNFSKRGMEIKDIGCPCCTGRIESCDHVFFECDIASDLWRKV
                     RIWVDLDIPIFDSWSSCLSWIEGYHLSVTSTASLFSIIASLIWHI"
     misc_feature    568..1290
                     /gene="LOC139842642"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(817..834,994..999,1132..1134,1138..1143)
                     /gene="LOC139842642"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(817..834,994..996,1138..1140)
                     /gene="LOC139842642"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    997..999
                     /gene="LOC139842642"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    1780..2034
                     /gene="LOC139842642"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagacact tgaagtccat aatcaaacca tggatgaaag ataagaaagt gatggaaaag
       61 tcaaaacgtg atgaggcctt ggataaaatt aatatgattg aattgaaaat tgaggctggc
      121 caggatacga atgcagacca cgaagaacga aacattctga tgcaggatat tgagaatctg
      181 aaacgtattg aagatatgga tactcaacaa aaatgccgcc tcaagtggga tgcggagggt
      241 gacgaaaact tcaaatactt ccattgtctt ttaaaaaaga ggagaagtga ccaaatgatt
      301 aaaggaatta ctgttaacgg agaatgggtt acggaaccaa aattaattaa agaggcattc
      361 tttaattttt atgagtctaa attcatggct cagggttgtg ttgcagtatg ggaatacggt
      421 agtgacaaag cacccggtcc ggacggtttt aactttgcgt tcattaaaaa atattgggat
      481 attctgaaag atgaggtgat ttcttcggtg gcagttgcgt tcaatagaaa gatcatgccg
      541 agaggaatgg gattggcatt tttttttact ttgatcccta aagtgaaaaa tccgtctttt
      601 attaaagact accgtccgat ttcgttaatt ggggtaatgt ataaaatcat taccaaaatt
      661 ttggcgatga gattggttaa ggttttagat aaaattatcg ggaaagagca atcttatttt
      721 atcactggga gacaaatcct tgacgggccg ctaattctga atgagacgat tgagtggtat
      781 aaaagacgta aggagaaact tttaattctg aaaattgatt ttgaaaaagc ctatgacacg
      841 gtgaattggg aatttcttga ttatatgctt cgcattctgg ggttcggtac ggtatggaga
      901 tcatgggtcc ggatggtgct agtttcggcc cgtacgtcca ttttagttaa tggtagtctt
      961 acgaaagaat ttgctattcg gcgaggttta cgtcaagggg acccgattag tccttttttg
     1021 tttttgattg tcatggaagg tcttcatctt tgcattaaag agaagattag agcaggagct
     1081 ttgagtggtg cttcggttgg taatccctcc attactttat ctcatttatt ttacgcagat
     1141 gacgcgatat tcatttcaag ttggagaaga aataacctgg aggcaatgtt acaaattttg
     1201 gatgtttttc acttgcattc gggcctagcc attaatattg ctaaatcagc tatatatggc
     1261 ataggtgtcg gggagattga acacaacgac atggtttcgg tggctaattg ttctaaaggt
     1321 acgatatggc gttttgttga ttgtcctgaa tcaaaatggg cctcggttat tcgcgtgatt
     1381 tatggagtgg atggtagtat agatggcgtc attcatggct caagtgtctg gccgactatt
     1441 gtcaaccttt ttggcaaact aaagaggaat gagttattac catctaatgt tctccgggtg
     1501 aaagtcgata atggtcattc tatccgattt tggaaagaca attggagaag aaatggaaat
     1561 cttggtaatc agtttaatcg gttaatgcat cttgacgtga atcctaactg tttgttgtcg
     1621 gatcgacttg taaacaacat gtggaggtgg aattggtcga gggccgacat tgggccaagg
     1681 aatgtgtcta tggtccaaca attaaatgat gttgtttgtg atattgtttt acgagacgaa
     1741 caagatagat gtgagtggac tattgctact gataggggtt atagtgttag cgatactcgt
     1801 cgatttttgg acgaaggtat tcttccttct tcggagatct cagcgaaatg gtggaagttt
     1861 attcctagaa aagtaaatat tctattgtgg cgtttggcat gggataggct tccgactaga
     1921 cttaacttct cgaagcgtgg tatggagatc aaagatatcg ggtgtccttg ttgtaccggg
     1981 cgaattgaat cttgtgatca cgtcttcttt gaatgtgata tcgcaagtga tttatggcgg
     2041 aaagttagga tttgggtgga cttagacatt cccatctttg actcttggtc ttcttgcttg
     2101 tcttggattg agggctacca cctatcggtt acttctacag cctcattatt ttctatcatt
     2161 gcctcactta tttggcacat ttag
//
LOCUS       XM_071832760             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842643), mRNA.
ACCESSION   XM_071832760
VERSION     XM_071832760.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139842643"
                     /note="uncharacterized LOC139842643; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842643"
     CDS             1..588
                     /gene="LOC139842643"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688861.1"
                     /db_xref="GeneID:139842643"
                     /translation="MLIYDNDYNIIFVSKIQTHSDATRDFYMVNVYGPNNAGRKRLIW
                     DKLASFISENIGEYVLFGDFNEVREEMEKFGSVFHDDEAHVFNTFIANTGLVDVPLGG
                     RRFTWINKAATKMSRIDRVLISLNVVDVFADLKLSILNRGLSDHLPIILQDAKADFGP
                     TPFKCFDSWFLYEGFDDLVKEAASEVIDSRVIISR"
     misc_feature    <85..453
                     /gene="LOC139842643"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(94..96,193..195,436..438)
                     /gene="LOC139842643"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgttgattt atgataatga ttataatata atttttgttt ctaaaataca aactcactca
       61 gacgctacac gtgactttta tatggttaat gtgtatggtc ccaataatgc gggtaggaaa
      121 agattgatat gggacaaatt ggcttcgttt atttctgaaa atattggtga gtatgtgctc
      181 ttcggggact tcaatgaagt tagagaggaa atggaaaaat ttggttcggt gtttcacgac
      241 gatgaggccc atgtgttcaa cactttcatt gccaacacgg gtttggtgga tgttccgcta
      301 ggaggaagga gattcacgtg gattaataag gcggcgacaa agatgagccg tattgatcgt
      361 gttcttattt ctcttaacgt tgttgatgtt tttgcagatt tgaagctttc cattttaaac
      421 cgggggttat ctgatcactt accgattatt ttacaagatg ctaaagcaga cttcggaccc
      481 actccattta aatgcttcga ttcatggttc ctatatgaag gatttgatga tttggtaaaa
      541 gaagcagcaa gtgaggttat agacagtaga gtgatcattt caagataa
//
LOCUS       XM_071832761             696 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842644), mRNA.
ACCESSION   XM_071832761
VERSION     XM_071832761.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..696
                     /gene="LOC139842644"
                     /note="uncharacterized LOC139842644; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842644"
     CDS             1..696
                     /gene="LOC139842644"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688862.1"
                     /db_xref="GeneID:139842644"
                     /translation="MPLGFLNQLEKFKSFYDDDTQNEEEKGDTSNPEAEGIIKFNPPY
                     YMYLIGLGDGSDDLYPSWAECDKILIPVHFSDPEHFILLTLNLDEQRVLVYDSLKGCL
                     KKGQLEAVFKNLSDNLPLYLKAIDYFNKKQDSQIVDYYENREDVELMIEDAPYVPMQS
                     GGHGDCGVWVCLHMERIVFGWDQIDNIGDPKKAAKDYRIRMARTFFRARFDTQEPPPP
                     EDPEDPEDPKVVN"
     misc_feature    <187..609
                     /gene="LOC139842644"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 atgccattgg gtttcctcaa tcaactggag aaattcaagt ccttttatga tgatgacact
       61 caaaatgagg aggagaaggg ggatacatct aatcctgaag cagaggggat cattaaattc
      121 aatcccccat attatatgta tttgattggt cttggggatg gtagtgatga cctttatcca
      181 tcctgggctg aatgtgataa gattttgatt ccagtacatt tttcagatcc tgaacatttt
      241 atactactca ctttgaactt agatgaacag agagtattag tctatgatag tttaaagggt
      301 tgtttgaaaa aaggtcaact cgaggctgtc ttcaaaaact tatcagacaa cttgccgtta
      361 tatttgaagg ctattgatta ctttaacaag aagcaggact cacaaattgt tgactattat
      421 gagaacagag aagatgtaga gttgatgatc gaggatgcac cgtatgtgcc aatgcagagt
      481 ggtggccatg gtgattgtgg tgtttgggtc tgccttcata tggagaggat agtttttggt
      541 tgggatcaga ttgacaacat tggagaccct aaaaaggctg ctaaggacta tagaattcga
      601 atggcaagaa cattcttccg tgcacgcttt gatacacagg aaccaccacc accagaggac
      661 ccagaggacc cagaggaccc aaaggttgtt aattag
//
LOCUS       XM_071832762             698 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842645), mRNA.
ACCESSION   XM_071832762
VERSION     XM_071832762.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..698
                     /gene="LOC139842645"
                     /note="uncharacterized LOC139842645; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842645"
     CDS             104..607
                     /gene="LOC139842645"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688863.1"
                     /db_xref="GeneID:139842645"
                     /translation="MISTNSRKRTRSTSDDDSAEAKRVLLDILDDSDSYTLSQDLDSF
                     MKSFQDEISPAPDVLTESGESQPELGFLFEASDDELGLPPTEKSRDLAVSVEDSELWG
                     LDEQITSYDSFEYEYGYGDVNITSNVYNSNISGGEYVALDGLFDHTDLGFGSSDLLWQ
                     PETLPAQ"
     misc_feature    <320..520
                     /gene="LOC139842645"
                     /note="putative molybdopterin biosynthesis protein
                     MoeA/unknown domain fusion protein; Provisional; Region:
                     PRK14497"
                     /db_xref="CDD:172968"
     polyA_site      698
                     /gene="LOC139842645"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttcacaaac atcctttatt tcttagatct ctttaatatc gaaactaccc ttacggcctt
       61 gctctctgta ttttatatat tttatatatt tataaaataa aaaatgatct caacgaattc
      121 tagaaaacga acccggtcca cctcggacga tgactcggca gaagccaaac gagttctcct
      181 cgacatacta gatgactcgg attcatatac actgagtcaa gacctggact cgttcatgaa
      241 aagctttcaa gacgagattt caccagcgcc ggacgttttg actgagtccg gcgagtcaca
      301 gccggagtta ggttttttgt ttgaagcttc ggatgatgaa ctcggcttac ctccgactga
      361 aaaatcgaga gatttagctg tatcagttga agacagtgag ttatgggggt tagatgaaca
      421 gataacgagt tatgactcgt ttgagtatga atatggttac ggtgatgtga atattacgag
      481 taatgtttat aatagtaaca ttagtggtgg tgaatacgtg gcgttagatg gattgttcga
      541 tcatacagat ctaggttttg gttcgtcgga tttgttatgg cagccggaaa ctttgccggc
      601 tcagtgaacg gaccttttta gttatatttt ggttagatga atattgtaaa gttcttttaa
      661 ttaattttta aaattatact ccctccgtcc cggattaa
//
LOCUS       XM_071832763            1420 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842646), mRNA.
ACCESSION   XM_071832763
VERSION     XM_071832763.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1420
                     /gene="LOC139842646"
                     /note="uncharacterized LOC139842646; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842646"
     CDS             236..1420
                     /gene="LOC139842646"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688864.1"
                     /db_xref="GeneID:139842646"
                     /translation="MMMNWVVTSLVLVVVATIDGARGDTMVSGTVFCDQCKDGEISIL
                     DYPLGGIRVLLTCPGENGQFTVLREATTNWLGAFATSFPGVSDMSSCRAQISGNGQGC
                     GAAGGPAQDFRLMFKLFDDQMYRVDPLVAQPTTPSPFCRRPSSSPDPHLPPPPHLNVP
                     PLTPWPTMPPLSPLPSLPPLPQLPPLPPLPQLPPLSPSPPMTQLPAMSPSPDLPPLPP
                     TQPPAVSPSPEVHLLSPPVTQLSPLSPFPELPPLPPLPPLPPEPFFNSSACPYQMWMM
                     PQHKCYWNVLSPNLTVALVFGPLASTQYGTNITLLQSMYGRGEPYRTLLREGTTALLN
                     SYTSKQFVYQPLEIVQRLNLALMNNSMQQVLVTAYKFIKANSGEKGNTTCKFIDCASP
                     TN"
     misc_feature    314..541
                     /gene="LOC139842646"
                     /note="Pollen protein Ole e 1 like; Region:
                     Pollen_Ole_e_1; pfam01190"
                     /db_xref="CDD:460103"
ORIGIN      
        1 acatctttat ttatatatat atatatgttg ggtagttgtg agctacatca aaccattttt
       61 tctgctctca cacaacccaa tcacaaatac tacataattc cataacctat accatacgga
      121 tcagtggttg tatacatact atcagtttta gggttaaaag agtgttattc ttattattag
      181 cttgtttata caatgatttg tttagatatt actttgttta tgtaatgtgg tcgtaatgat
      241 gatgaactgg gtagtgacaa gtctcgtgtt ggttgttgtt gcgaccattg atggagctcg
      301 tggagatacg atggtcagtg gtaccgtctt ttgtgatcaa tgcaaagatg gggagattag
      361 cattcttgat tatcctcttg gtggaataag agtattacta acttgcccgg gtgagaacgg
      421 gcagttcaca gtgttaaggg aagcaactac aaactggtta ggcgcgttcg caacttcatt
      481 tccaggtgta tcggacatga gtagttgtcg ggcacagatc tccggcaacg ggcagggttg
      541 cggggcagca ggcggtcccg cccaagactt cagactcatg tttaaactgt ttgatgatca
      601 aatgtatagg gtggacccct tggttgctca acctaccacg ccttccccct tctgtcgccg
      661 accatcgtcc tcacctgacc ctcatctacc gcctcctcct cacctcaatg ttccgccact
      721 tactccgtgg ccaacaatgc cgccattatc tccattgcca tcactgccgc cattacctca
      781 attgccgcca cttccacctc tacctcaatt gccgccatta tctccatcac cgccaatgac
      841 tcagttgcct gcaatgtcac cgtcgcctga tttgcctcca ttgccaccta ctcagccgcc
      901 tgcagtgtca ccttctcctg aggttcatct gctgtcgcca ccagtgactc agttgtctcc
      961 attatcacca tttccagagt tgccaccatt accgccttta cctccgttgc ctccagaacc
     1021 attcttcaat tcttctgcgt gtccatacca aatgtggatg atgccccaac acaaatgcta
     1081 ttggaatgta ctgagcccga atttaacagt agcacttgtt tttggaccat tggcttcaac
     1141 acaatacgga acaaacatta cgttacttca aagcatgtat ggtagaggcg aaccttatcg
     1201 gacacttcta agggaaggaa cgaccgctct tttaaattcc tacactagca agcaatttgt
     1261 ttatcagcct ctagaaattg ttcaacgatt aaacttagca ttgatgaata attctatgca
     1321 acaagtcctt gtgacagcct acaagttcat aaaggcgaat tcaggagaaa aaggaaatac
     1381 tacttgtaaa ttcattgatt gtgcttcacc aacaaattaa
//
LOCUS       XM_071832764             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842648), mRNA.
ACCESSION   XM_071832764
VERSION     XM_071832764.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139842648"
                     /note="uncharacterized LOC139842648; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842648"
     CDS             1..636
                     /gene="LOC139842648"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688865.1"
                     /db_xref="GeneID:139842648"
                     /translation="MIAGTVLHPEKKDSWIWTPGINGNFTTKNFTDMINARLLNSSDT
                     ICETLHNKLVPKKVEVFVWRAKKSRLPVLVELDKRGIDLHSVRFPLCNDAIESVNHSL
                     ILCKHAFEVWGKVFDWWGRGVIPYANVGDLFLDTGQSASHMGKFIWQAVVWTCSYLIW
                     KNRNQKVYNNKCWNVPVALNEIQVKSFEWIAKRSLITSVGTRPLLIFPYLN"
     misc_feature    <151..333
                     /gene="LOC139842648"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgatcgcgg gtacggttct acatccggaa aagaaagatt catggatatg gactccgggc
       61 atcaatggga acttcactac aaagaatttt acagatatga ttaatgcgag acttttaaat
      121 tcaagtgaca caatatgtga gactttacac aacaaacttg taccaaaaaa ggtggaggta
      181 tttgtttgga gagcaaaaaa atcacgtctt ccggttttgg tggagctcga caaaagggga
      241 attgacctac actcggtgcg ttttccgctt tgtaatgatg ctattgagtc ggtcaaccac
      301 tctttaatct tgtgtaaaca tgcttttgag gtttggggta aggtatttga ttggtggggt
      361 cggggagtaa taccgtatgc caacgttggg gacctatttc ttgacacggg acaatcggcc
      421 tctcacatgg gcaaatttat ttggcaagcg gttgtgtgga catgttccta tcttatttgg
      481 aagaatcgga atcaaaaggt ctataataac aagtgttgga acgtgcccgt tgctcttaat
      541 gaaattcaag ttaaaagctt cgagtggatc gcgaagaggt ctttaataac aagtgttgga
      601 acgcgcccgt tgctcatatt tccatacttg aattga
//
LOCUS       XM_071832765             957 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842649), mRNA.
ACCESSION   XM_071832765
VERSION     XM_071832765.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..957
                     /gene="LOC139842649"
                     /note="uncharacterized LOC139842649; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842649"
     CDS             139..957
                     /gene="LOC139842649"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688866.1"
                     /db_xref="GeneID:139842649"
                     /translation="MRPPKRPIQVISSWIRRQPPKVKAFLGVVTGMLALVLLRVIVHD
                     HDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKTQELTAIFLAVRLYCSFVMEYDI
                     HTLLDLATLATTLWVVFMIRFKLKSSYMEDKDNFAMYYVAVPCAVLALVIHPSTSHHI
                     INRVFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLD
                     SRGHLLTALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV"
     misc_feature    352..783
                     /gene="LOC139842649"
                     /note="ER lumen protein retaining receptor; Region:
                     ER_lumen_recept; pfam00810"
                     /db_xref="CDD:459945"
ORIGIN      
        1 attcaccccc aaatcaacca gcgtaatcaa accctaacta ccaacaacaa aacaccgatc
       61 tataacctaa tcaaaatcaa caacacttat agataaaatt caactcacag acacaaaacc
      121 ctagggtttg aatagaaaat gaggccgcca aagagaccga tccaagtaat atcatcatgg
      181 atacgacggc aaccaccaaa ggtgaaagct tttttgggtg tagtaacagg gatgctagcg
      241 ttggtgttac ttcgtgtgat cgtacacgat catgataatt tgtttgttgc tgctgaagct
      301 gttcactcca ttggtatctc cgttcttatt tataaactca tgaaggaaaa aacttgtgct
      361 gggctatcac tgaaaacaca ggaactaaca gctatcttcc tggctgttag attatactgc
      421 agttttgtta tggagtatga catacacact ttgcttgatt tggctacatt ggctaccact
      481 ttatgggttg tatttatgat ccgttttaaa cttaaatcaa gctacatgga agacaaagac
      541 aacttcgcaa tgtactatgt ggcggttcct tgtgctgtac tagctttagt aattcaccct
      601 tcaacatctc atcatattat taacagggtg ttttgggcat tttgtgttta ccttgaagca
      661 gtttcagtcc ttccgcaact cagggttatg cagaacacaa agattgtaga accattcacc
      721 gctcattacg tattcgccct aggtgttgca aggtttttga gctgtgctca ctgggttctt
      781 caggttttgg atagtcgtgg gcatctgctt acagcactgg gttatggatt atggccgtca
      841 atggttctca tttcggagat cgttcaaaca ttcatattag ccgacttttg ttactactat
      901 gtgaaaagtg tttttggagg acaacttgtt ttgcgtctac cttctggagt ggtgtaa
//
LOCUS       XM_071832767             825 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842650), mRNA.
ACCESSION   XM_071832767
VERSION     XM_071832767.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..825
                     /gene="LOC139842650"
                     /note="uncharacterized LOC139842650; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842650"
     CDS             1..825
                     /gene="LOC139842650"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688868.1"
                     /db_xref="GeneID:139842650"
                     /translation="MYAFKKEIGNLGGILTVWDPNIFTANCVIEKDSFIAIKGLWKDV
                     GTELILVNIYGPQTEIAKKKMWFDLSELLKYNNAMWVLLGDFNEVRFFTERKNTEFCE
                     RNAKYFNEFIKDNALLDLPLGGRTYTRISDDSQKFSKLDRFLVSENFIENWPSANVTI
                     IDKKHTDHCPLILKDGDVDFGPKPVKVFDEWLKHKESYDIIKVAWNTKVKSYRPDCIF
                     HDKLKLVKQELEKWYSTSHGKLGIEIEELTTVVNEWEKKAETSELSEAQHNKWMAD"
     misc_feature    <70..522
                     /gene="LOC139842650"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(160..162,259..261,502..504)
                     /gene="LOC139842650"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtatgcct ttaaaaaaga aataggtaat ttgggcggga ttctaacggt ctgggaccct
       61 aatattttta ctgctaactg tgttattgaa aaggactcct ttattgcgat aaaaggactt
      121 tggaaagatg taggtactga gctcattttg gtgaacatat acggaccaca aactgagatt
      181 gctaaaaaga aaatgtggtt tgacctttcc gagttattga agtataataa tgcaatgtgg
      241 gttttacttg gggatttcaa cgaagttcga tttttcaccg aaagaaagaa cacagaattt
      301 tgcgagagaa atgctaaata tttcaatgag ttcattaagg ataatgcttt acttgatttg
      361 ccgttaggcg gaagaaccta cactcgtatc agcgacgata gccaaaaatt tagtaagctt
      421 gatcgtttcc tcgtttcgga gaattttatt gaaaattggc caagtgccaa tgtcacgatc
      481 atagacaaga agcatacaga ccactgtccg ttaattttaa aagacggtga cgttgatttt
      541 ggacccaaac cggtaaaagt cttcgatgaa tggttgaaac ataaagagtc ctatgatatc
      601 ataaaagtag catggaatac aaaagtcaaa agttacagac cagactgcat atttcatgac
      661 aaactaaaat tggttaaaca agaactcgag aaatggtatt ccacctcaca tggcaaacta
      721 ggaatcgaaa tcgaggaatt aacaacggtt gtaaatgaat gggaaaagaa agccgagacc
      781 tctgaactta gcgaagctca acataataaa tggatggctg actga
//
LOCUS       XM_071832768            2007 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842651), mRNA.
ACCESSION   XM_071832768
VERSION     XM_071832768.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2007
                     /gene="LOC139842651"
                     /note="uncharacterized LOC139842651; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842651"
     CDS             1..2007
                     /gene="LOC139842651"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688869.1"
                     /db_xref="GeneID:139842651"
                     /translation="MATMSNDDSQPPSSQQSQIDELTSQLENLLKNNYQQPKISDTLK
                     IGLSLNSSNFALWSRMMRVAIGGKSKVLLKHLTSNPLDNSHEEFEQWEQEDLIVFSWL
                     IQNIEPNLASNLTSFSTAKLLWDALATTYSSGTDKLQTYDLYVKATEMKQNNLNLEEL
                     WIRMQGIWGELEIRDPNPMESASDINKYNMIRAEQKLFQFLKALDQKYDTIKRELLRL
                     NPLPTAEEAYAAVRKETAHRQILGLSPSDSLTNHGIATGLVTIDGKESSVHLTKTHRS
                     GYQPRIDKSKLKCTRCGKSKHTIDQCFEIKGYPEWWPKPIKGKASTAAASGESNTTTT
                     SDGFGGIATTHKTAGINLKPFSSLFTNTEKATRIKSKRDNSVKASRKDAIPLFDVNGK
                     KGNSSPNFLKENKRTNGKRNRFPRLGGLKPVGLNLNKLTKEGWVKEGPTMYVNSPDCT
                     KVKIGPQFGSNINKNIKTESNFVPCQNKYSVLTKIQKDLSEANIVSNDSKSKSWIFDC
                     GATDTMTFDENDIIFKTKPKKNRIQTANGEIIQVKSGGTIEISQTIKLPNCLYIPALS
                     HKLLSDIRTGLLIGRGTEKGGLYYVDEVSQQGTVSLAHGTPSREAWLWHRRLGHPHRS
                     TFKPSNTRQDVPFALIHSDVWGPAPVTGGKIFGTLSCLLMIIQG"
     misc_feature    1759..>1881
                     /gene="LOC139842651"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
ORIGIN      
        1 atggccacca tgtctaacga cgacagccaa ccaccttcaa gccaacaaag ccaaattgat
       61 gaactaacca gtcaattgga aaatctctta aaaaacaatt atcaacagcc caagatctca
      121 gatacattaa agataggttt gagtctaaat agctcaaact ttgcattgtg gtcaagaatg
      181 atgagagttg ccattggagg taaatccaag gtacttctca aacatttaac ctccaatcct
      241 ctagataaca gtcatgaaga attcgaacaa tgggagcaag aagacctcat cgtattctca
      301 tggctgatac aaaatattga gcccaattta gcaagcaatc ttacttcgtt ttcaaccgcc
      361 aaactactat gggatgcatt agctacaacc tatagtagtg gcactgataa gctccaaact
      421 tatgatttgt atgtcaaagc tacagaaatg aaacaaaaca acctcaatct tgaagaattg
      481 tggatccgga tgcaaggtat ttggggtgaa ctcgaaatcc gagacccaaa ccccatggaa
      541 agtgcatcag atatcaacaa atacaacatg attagggctg aacagaagct ttttcagttt
      601 ttaaaggctc ttgatcaaaa atatgacaca atcaagagag agcttctaag attaaaccca
      661 ctaccgacgg cggaggaagc ctacgccgcc gtgagaaaag aaacagccca tcgacagatt
      721 ctagggttat caccaagtga ctccttaacc aatcatggga ttgcaaccgg tttggtcaca
      781 atcgatggca aagagtcatc tgttcatcta accaagaccc accggagtgg ttatcaaccg
      841 agaatcgaca aatcaaagct taaatgtaca agatgtggta aatcgaagca taccatcgat
      901 cagtgttttg agataaaagg gtatccagag tggtggccaa agccaattaa aggtaaagca
      961 tcgacggcag cagcaagtgg tgaatccaac accaccacca ccagtgacgg cttcggtggt
     1021 atagccacca cccataaaac cgctggtata aacttaaaac ctttctcctc tttatttaca
     1081 aatacagaaa aagcaactag gattaagtca aaaagggata actcagttaa agcatctagg
     1141 aaagatgcaa tccctttatt cgatgtaaat gggaaaaagg gaaacagctc accaaatttc
     1201 ttgaaagaaa ataaaagaac gaatggaaaa aggaatcggt ttcctagact tggtggatta
     1261 aaacctgttg ggctaaacct taataagcta actaaagagg gatgggttaa agagggccca
     1321 actatgtatg ttaacagtcc agattgtaca aaggttaaaa ttgggcctca atttggtagt
     1381 aatattaata aaaatataaa aaccgagtcc aattttgttc cgtgtcaaaa caagtactcc
     1441 gttttaacaa aaatacaaaa agacctttcc gaagcaaata ttgtctcaaa tgattctaaa
     1501 tcgaaatctt ggatttttga ttgtggggca acggatacta tgacttttga tgaaaacgat
     1561 attattttca aaacaaaacc taaaaaaaat aggattcaaa cggctaatgg tgaaattatt
     1621 caagttaaaa gtggcggtac cattgaaatt tcacaaacta ttaagctacc taactgtcta
     1681 tatattccag ctttatctca taagctgtta tcggatatcc ggacaggact gttgattgga
     1741 cgtggcactg aaaaaggggg gttatactat gttgacgagg tgtctcagca aggtaccgtg
     1801 tcacttgctc acggaacacc ttcgagggag gcctggttat ggcataggag attgggtcac
     1861 ccccaccgta gtacatttaa acctagtaat actagacaag atgtaccttt tgctttaatt
     1921 cattctgatg tatggggacc ggccccggtt actgggggga aaatcttcgg tactttgtcc
     1981 tgtttattga tgatcataca aggatga
//
LOCUS       XM_071832769            1278 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842653), mRNA.
ACCESSION   XM_071832769
VERSION     XM_071832769.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1278
                     /gene="LOC139842653"
                     /note="uncharacterized LOC139842653; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842653"
     CDS             1..1278
                     /gene="LOC139842653"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688870.1"
                     /db_xref="GeneID:139842653"
                     /translation="MASYLLSYDSDSEDERIIALIQHLEDDDDEVESDRVPRSRIYIP
                     RNREEAGENLWKDYFSDTPVFPPYKFKRRFRMRIELFLRISQGISNFDSHDTPEHFRF
                     FRERFDAIGRPTFTILQKMTSALRQLAYGTADDMFDEYLKMSEQISILCLDNFCKCII
                     TLYKERYMRSPNAYDVQRLYSKHEEKHGFKGMLRSIDCMHWEWKNCPVALKGQYTRGD
                     HKKPTIMLEAVASYDLWIWHAFFGMAGSNNDINVLNQSYVFDKLKKGTTPLAPFEVNG
                     NQYTKGYYLADGIYPDWATLVKGFACPTDDPRIKFTRFQASVRKDVERAFGVLQGFAL
                     SDWEEEFITEDMENRPERIPNRGRDQDVIIREIRDRTSLWFQKVTTLVTESHRRLFAP
                     SEDIMCGSREGNMSGFQIGKRDLKTPFYYLKRR"
     misc_feature    496..990
                     /gene="LOC139842653"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcatcgt atttacttag ttacgattcc gattcggaag acgagcgtat tattgcacta
       61 attcaacatt tagaagatga tgatgacgaa gtcgaatccg accgtgttcc aagatcacga
      121 atttatattc caaggaatcg tgaagaagcc ggagaaaact tatggaagga ttattttagt
      181 gacacacccg tgtttccgcc atataaattt aaaaggcgtt ttcgtatgcg gattgaacta
      241 tttctccgaa tatcgcaagg tatttctaat ttcgattctc atgatactcc cgagcatttt
      301 agatttttta gggaacgttt tgatgctatc ggtcggccga cttttacaat attgcaaaaa
      361 atgacttcgg ctctacgcca attggcgtat ggaactgccg atgatatgtt tgatgaatat
      421 ttaaaaatga gtgagcaaat ctcaatactt tgtttagata acttttgtaa atgtattatt
      481 acattataca aagaacgtta catgagatct cccaatgcat acgatgttca acgtttatat
      541 agtaaacatg aagagaaaca tggttttaag ggtatgctca ggagtattga ttgtatgcat
      601 tgggagtgga agaattgtcc cgttgctttg aagggacaat acactagggg tgatcacaag
      661 aaacctacca ttatgcttga agcagttgct tcgtatgact tgtggatttg gcatgcattt
      721 tttggaatgg cgggttccaa caatgatata aatgttttga atcaatccta tgtttttgat
      781 aaacttaaaa agggaacaac tccactagca ccatttgagg taaacggtaa tcagtacaca
      841 aaaggctact acttagctga cggtatatat cctgactggg ctactctagt caaaggtttt
      901 gcgtgtccga cagatgatcc aaggattaag tttactaggt ttcaagctag tgtccgaaag
      961 gatgtagaga gggcatttgg ggttcttcaa ggatttgcgt taagtgattg ggaggaagag
     1021 ttcattaccg aagatatgga gaatcgtccg gaacggatac cgaatagagg acgggatcaa
     1081 gacgttatca tccgagaaat aagagatagg acgtcactgt ggtttcaaaa agttacaact
     1141 ttagtcacgg aatctcacag acgtttattt gctccgtcag aagacatcat gtgcggatca
     1201 cgtgagggga acatgtctgg ttttcaaatt gggaaacgag atctgaaaac ccctttttat
     1261 tatttgaaac gaagatga
//
LOCUS       XM_071832771             480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842654), mRNA.
ACCESSION   XM_071832771
VERSION     XM_071832771.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..480
                     /gene="LOC139842654"
                     /note="uncharacterized LOC139842654; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842654"
     CDS             1..480
                     /gene="LOC139842654"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688872.1"
                     /db_xref="GeneID:139842654"
                     /translation="MPDVPYQINGVHYSRGYYLGDGIYPTWAAFVKEFSSDVDEKCTY
                     FTKKQASAHKDVERTFGILQGRWHILQQPARAYEVNIMRQLMYTCIVIHNIIIEDNGY
                     NLAKNDWVVEPVQHIQRTWIDRCDARARRTRELRDREVHECIRSDLVEHLWDLRDDL"
     misc_feature    <4..303
                     /gene="LOC139842654"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcccgacg ttccttatca aataaacggg gttcattaca gcagagggta ttatttaggt
       61 gacggtattt acccaacttg ggcggcattt gttaaggaat tttcaagtga tgttgacgaa
      121 aaatgtactt actttacaaa gaaacaagcg agcgctcaca aagatgttga aagaacgttt
      181 gggatcctac aaggccgttg gcatattctt cagcaacccg cacgggctta cgaggtgaac
      241 ataatgagac aactaatgta cacgtgcatc gtgatacaca acatcattat cgaagacaat
      301 ggatacaacc ttgctaagaa tgattgggta gttgagcccg ttcaacatat acaacgtact
      361 tggatcgata ggtgcgacgc tcgtgcaaga agaacaaggg agttacgtga tagagaagtg
      421 catgaatgca tacgatctga tttggttgaa catttgtggg atcttcgtga cgacttatga
//
LOCUS       XM_071832772             288 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides auxin-induced protein
            15A-like (LOC139842655), mRNA.
ACCESSION   XM_071832772
VERSION     XM_071832772.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..288
                     /gene="LOC139842655"
                     /note="auxin-induced protein 15A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139842655"
     CDS             1..288
                     /gene="LOC139842655"
                     /codon_start=1
                     /product="auxin-induced protein 15A-like"
                     /protein_id="XP_071688873.1"
                     /db_xref="GeneID:139842655"
                     /translation="MGMGKINITSAKEMLKKKKGSSSATDCVKKGHFAVYVGKMNKRY
                     VIPLSTLNHPLFKDLLRWVEEEYGFDNSEGCLKIPCSEDYFDGLVSLITST"
     misc_feature    28..258
                     /gene="LOC139842655"
                     /note="Auxin responsive protein; Region: Auxin_inducible;
                     pfam02519"
                     /db_xref="CDD:460580"
ORIGIN      
        1 atgggaatgg gaaaaatcaa cattacaagt gctaaagaaa tgttaaagaa gaaaaaggga
       61 tcttcaagtg ctacggactg cgtaaagaag ggccattttg cagtttatgt aggtaaaatg
      121 aataaaagat atgtgatccc actgtcaacg ttaaatcacc ctttgttcaa ggatctttta
      181 cgttgggtcg aagaagaata tggtttcgac aactcagagg gttgtttgaa aattccttgt
      241 agtgaagatt attttgatgg cctagtttcc ctaataactt caacttga
//
LOCUS       XM_071832773            1071 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842656), mRNA.
ACCESSION   XM_071832773
VERSION     XM_071832773.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1071
                     /gene="LOC139842656"
                     /note="uncharacterized LOC139842656; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842656"
     CDS             1..1071
                     /gene="LOC139842656"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688874.1"
                     /db_xref="GeneID:139842656"
                     /translation="MSSATEDTLNSTDTNSINHPLFLHQNDNPSIILISKKLTGSENY
                     DSWKRSMMIALNAKNKLKIITNEYPEPAADSNLRPLWERNNDMVISWILNTVTDEIIN
                     SLNFINSASKLWHELQEHYSQIDGHRIYQLANDISQLKQNNCTIEVYYHKLKGLYDET
                     DALEAPYMCNCLCTCENGRLNGAGDQRKRLIQFLMGLDESYSSIRGQILLMQPLPTIA
                     KTYGMIKQEEKQREGILPKPAVPAVMSTFTNNYKPSTYNNYQRTTKPSSTITERKSSF
                     KPGVKCTTCFREGHTSEECYKNVGYPPGHPLHGKFQPKQPTAKDKVINSVYTNNTIDS
                     QVPATNQQAEHIMTARMDQLQN"
     misc_feature    70..216
                     /gene="LOC139842656"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    88..>375
                     /gene="LOC139842656"
                     /note="Ty5 Gag N-terminal region; Region: Retrotran_gag_4;
                     pfam17241"
                     /db_xref="CDD:407356"
ORIGIN      
        1 atgtcatctg caactgaaga tacactcaat tcaaccgaca ctaactccat taatcatcca
       61 ctatttcttc atcaaaatga caatccaagc atcatcctaa tttcaaagaa actcactgga
      121 tcagaaaact atgatagctg gaagagatct atgatgattg cattaaacgc caaaaacaaa
      181 ttgaagatca tcaccaatga atatccagaa cctgctgcag attcaaacct tcgaccacta
      241 tgggagagga ataatgacat ggtcatttct tggatcttaa acacagtcac agatgaaatt
      301 atcaacagtt tgaacttcat caactcagct tcaaagctat ggcacgaact gcaagagcat
      361 tattcacaaa ttgatggaca taggatctat cagctagcta atgacatctc tcaactcaaa
      421 cagaataact gcaccattga ggtttattat cacaaactca aaggccttta tgatgaaaca
      481 gatgccctag aggcacctta catgtgcaat tgcttgtgta cttgtgaaaa tggtagactg
      541 aatggtgctg gggaccaaag aaaacgacta atccagttcc tgatgggatt ggatgaaagt
      601 tactccagca taagaggaca aatcctgcta atgcaaccac ttccaaccat tgccaaaacc
      661 tatgggatga tcaaacaaga agaaaagcaa agagaaggta ttcttcccaa accagcagtt
      721 cctgcagtca tgtccacatt caccaacaac tacaaaccat caacatacaa caactatcaa
      781 agaaccacaa aaccatcatc taccatcaca gaaagaaaat caagcttcaa acctggtgtc
      841 aaatgcacca cctgcttcag agaaggacat acatcagaag agtgctacaa gaatgttggt
      901 tatccacctg gtcatccctt acatggcaaa tttcaaccaa aacagccaac tgcaaaagat
      961 aaagtcatca atagtgttta tactaacaac actattgact cacaggtccc tgcaacaaac
     1021 caacaagctg aacacataat gactgcaagg atggatcaac ttcaaaacta a
//
LOCUS       XM_071832774             444 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842657), mRNA.
ACCESSION   XM_071832774
VERSION     XM_071832774.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..444
                     /gene="LOC139842657"
                     /note="uncharacterized LOC139842657; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842657"
     CDS             1..444
                     /gene="LOC139842657"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688875.1"
                     /db_xref="GeneID:139842657"
                     /translation="MTGSNNDINVLNQSHVFDKLKNGTTSPAPFEVNGNHYTKDYYLA
                     DGIYPHWTTLVKGFAALTDDPSIKFTWFQASARKNVVSGVFEGRLHILKLAARTMSVN
                     KMQRVMDYCIILHNMILEYQGFALSDWEEDKTCRVIYGLIDKSGL"
     misc_feature    <4..369
                     /gene="LOC139842657"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgacgggtt ccaacaatga tataaatgtt ttgaatcaat cacatgtttt tgataaacta
       61 aagaacggaa caacttcacc cgcaccattt gaggtaaatg gtaatcatta cacaaaagac
      121 tattacctag ctgatggtat atatcctcac tggactaccc tagtcaaagg ttttgcggcg
      181 ctgacagatg acccgagcat taagtttaca tggtttcaag ctagtgcccg aaagaatgtt
      241 gtgagtgggg tttttgaagg tcgacttcat attttaaaat tagcggcacg cactatgtct
      301 gtaaacaaga tgcaaagagt tatggattat tgtatcatat tacataatat gattttagaa
      361 tatcaaggat ttgcgttaag tgattgggag gaagataaaa catgcagggt tatatatggt
      421 cttatagata aatctggatt atga
//
LOCUS       XM_071832775            1584 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842658), mRNA.
ACCESSION   XM_071832775
VERSION     XM_071832775.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1584
                     /gene="LOC139842658"
                     /note="uncharacterized LOC139842658; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842658"
     CDS             1..1584
                     /gene="LOC139842658"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688876.1"
                     /db_xref="GeneID:139842658"
                     /translation="MEVLTLFLNRSVNESDKFRFHPMCEKLDIINLCFADDLFLFSYA
                     NKDSVSAICEALEEFKSCSGLVPSLAKSMAFFANFHQGVKTAILSILPFEDGKLSVRY
                     LGVPLVTSSLMHRDCKPLVDQGKEIEALMGDFLWCQSEMKRGKAKVKWFIVYLPKEEG
                     RLGIKRLKDWNVALLTSQVWRILSNTNSLWVQWIHSYRLKGRNFWDAPGVAGASVGVI
                     HEAGLQRDATVRNIVSASGWCWPASWAIQFPGLNHIAPSILNSCPDVIKWRAWNGDPQ
                     VFSVNRVWDTIRPHANLVPWYSLVWYMQCIPRHSFLFWLLMGENLKTQDKLKTQVWSL
                     VKSNMVFNVTGDSWKDFVNVASPVAGKKNVDCIVAKFLFGASVYFIWQERNGRVFKRR
                     SRSCGSLVALIFSTVRCLVGGLFLPGLLALRNVSLLFSYLNFVVYLSLSFNTFHRVGS
                     AGRVVVDSMVDGRVVVDSRVDGRVVLHEELRIIKVILRVAQPPLPPLKIPTGHRPPPL
                     KPPENLETSNLSSDQEFIS"
     misc_feature    <22..321
                     /gene="LOC139842658"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    832..>1002
                     /gene="LOC139842658"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaggttc taacattgtt tcttaaccgt tcggttaatg aatctgataa atttcgattc
       61 caccctatgt gtgagaagct ggatattata aacctttgtt ttgctgatga cttatttcta
      121 ttttcttatg caaataagga ttcggtttca gccatttgcg aggccttgga agaatttaaa
      181 agttgttcgg gattggttcc tagtttggca aaaagcatgg cgttctttgc aaattttcat
      241 cagggtgtga agactgctat cctttctatt cttccttttg aagatggtaa gctttcggtg
      301 agatatttgg gggtccctct tgttacgtcg agtcttatgc acagggactg taaaccgttg
      361 gttgaccagg gtaaagaaat tgaggcctta atgggagatt ttttatggtg tcaaagcgag
      421 atgaagcgtg gtaaggctaa agttaaatgg tttatagtat atttaccaaa agaagaaggt
      481 agattaggca ttaaacggct caaagattgg aatgttgctt tattaacatc tcaagtttgg
      541 cgtatattgt ctaacacaaa ttccttgtgg gtccagtgga ttcattcata tcggctcaag
      601 ggtcgtaatt tttgggatgc tcctggtgta gcaggagcga gtgttggagt tattcatgaa
      661 gctggtctcc aaagagatgc cactgttcgt aacattgtct ctgcttctgg atggtgttgg
      721 cctgctagtt gggctattca gttcccaggt ttgaatcaca tcgccccttc tattcttaat
      781 agttgtcctg atgtaatcaa atggagagcg tggaatggtg acccgcaagt cttttcggtt
      841 aacagagttt gggacacaat tcggcctcat gcgaatctag ttccatggta ttctcttgtt
      901 tggtatatgc aatgcatccc gaggcactcg tttttatttt ggttgcttat gggtgagaat
      961 ttgaaaacgc aagataagct caaaactcag gtttggtctt tggtgaaaag taatatggtt
     1021 tttaatgtca caggtgattc ttggaaggat tttgtgaatg tggctagtcc ggtggcaggt
     1081 aagaagaatg tggattgtat tgttgctaag tttctctttg gtgcgtcggt ttattttatt
     1141 tggcaagaga ggaatggtag ggtttttaaa cgtcgatctc gatcatgtgg aagcttggtt
     1201 gctttgatct tctctacagt caggtgtttg gttggtggcc tttttttgcc tggtttgttg
     1261 gctttgagaa atgtctcatt gctattttct tacttgaact tcgttgtata tctttcgttg
     1321 agttttaata catttcaccg ggttggctct gctggtagag ttgtggttga tagtatggtt
     1381 gatggtaggg ttgtggttga tagtagggtt gatggtaggg ttgtgcttca cgaagagcta
     1441 cgtataatta aggtgattct tcgagttgct caaccaccac ttccacctct aaagattccc
     1501 accggccacc gtcctccgcc gctgaaaccg ccggaaaatc ttgaaacctc taatttgtct
     1561 tctgatcaag aatttatcag ctag
//
LOCUS       XM_071832777             731 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842659), mRNA.
ACCESSION   XM_071832777
VERSION     XM_071832777.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..731
                     /gene="LOC139842659"
                     /note="uncharacterized LOC139842659; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842659"
     CDS             3..731
                     /gene="LOC139842659"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688878.1"
                     /db_xref="GeneID:139842659"
                     /translation="MQRVTKSIALMDKVAKLDDPQCELLLLRACTGVSKLYFTLRTCP
                     PSIFKAAQRAFDEALRSSLERIVTASGPGFGDWQWRLATLPFAFGGLGVYSAGDVRHY
                     AFLASRLQSAGLQTKLLRHTGNPSEVAAPILMKKLADVYFTKVTASAESTFSLSPRQS
                     ALWKSQQGDHTSAWLRAVPILGLGQTMNAKTYRCVLCYRLGVPLFSISTACSACSRVF
                     TGNIFGDHAVSCAGQIWTLSTPLL"
ORIGIN      
        1 tgatgcaaag ggtgaccaag tccattgcgc ttatggataa ggttgctaag cttgatgatc
       61 ctcagtgtga gttgttgttg cttagggcat gtacgggagt ttctaaactc tactttacct
      121 tgcgtacttg tcctcctagt atatttaagg cggctcaacg cgctttcgat gaagcccttc
      181 gatcttcttt ggagcgtatt gttactgctt cagggcctgg gtttggtgat tggcagtggc
      241 ggcttgccac cttgccattt gcatttggag ggcttggtgt ttattctgcg ggagatgttc
      301 gtcattatgc ttttctggct tctcgattac agtctgctgg gttgcagacc aagctcttac
      361 gtcatacggg taatccgagt gaggtcgctg ccccaatact catgaagaaa ttggcagatg
      421 tttatttcac aaaggttacc gcttctgcag aatccacttt ttcgttatct ccccgacaat
      481 cggccttatg gaaatcacag cagggtgatc acacatctgc ttggctaagg gcagtcccta
      541 ttttggggtt gggtcagacg atgaacgcaa agacttaccg atgtgtgttg tgctaccggt
      601 taggtgttcc tttgttctct atctcgacgg catgctctgc ctgttcaagg gtttttactg
      661 ggaatatttt cggggatcac gccgtgtctt gtgctggtca aatatggact ctgtcaactc
      721 cactacttta a
//
LOCUS       XM_071832778             675 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842660), mRNA.
ACCESSION   XM_071832778
VERSION     XM_071832778.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..675
                     /gene="LOC139842660"
                     /note="uncharacterized LOC139842660; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842660"
     CDS             1..675
                     /gene="LOC139842660"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688879.1"
                     /db_xref="GeneID:139842660"
                     /translation="MVSPEIIPVTTKSIESPRISFSAEFLDDANFICINPHDRDKDND
                     KDKEKPKVGEFEFLSNNLSAATKMLTADELFFEGKLLPFWQKQCSEKLAKISIKPEKV
                     NEVVKMEEIKVEESNRMSWFIDEDPSPRPPKCTVLWKELLRLKKQRASSLSPSSSTSS
                     SSSASSLEEDSKKERQVKRVKKGLERTRSAGLKIRPMVNLPVCTQGVRSNSLPPLFVR
                     KNMLNR"
ORIGIN      
        1 atggtctcgc cggaaattat tccggtcacc accaaatcaa tcgaaagtcc ccgcatttcg
       61 ttctccgccg agttcttaga cgatgctaat ttcatctgca ttaatccgca cgatagagat
      121 aaagataatg ataaagataa agaaaagcca aaagttggtg agtttgagtt tctatcgaac
      181 aacttatcag ctgcaacgaa aatgttgaca gctgacgagc tttttttcga agggaaattg
      241 cttccgtttt ggcagaagca atgttctgaa aagctagcga aaattagtat aaaaccggag
      301 aaggttaatg aggttgtgaa aatggaagag attaaagtag aagagagcaa tagaatgagt
      361 tggtttatcg atgaagatcc gtcacctaga ccgccaaaat gtacggtttt atggaaagaa
      421 ttattacggt taaagaaaca acgtgcgtct tctctttcac catcttcgtc tacttcatct
      481 tcttcatctg cttcttcgtt agaagaagat tcgaaaaagg agaggcaggt gaagagagtt
      541 aaaaagggac tggagagaac cagatcggcc ggactaaaga tccggccgat ggttaatctc
      601 cctgtttgta ctcaaggagt acggagcaac tctttgcctc ctcttttcgt taggaaaaat
      661 atgttaaaca ggtaa
//
LOCUS       XM_071832779            1062 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842661), mRNA.
ACCESSION   XM_071832779
VERSION     XM_071832779.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1062
                     /gene="LOC139842661"
                     /note="uncharacterized LOC139842661; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842661"
     CDS             1..1062
                     /gene="LOC139842661"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688880.1"
                     /db_xref="GeneID:139842661"
                     /translation="MRLLKKPLRKLMWTKDNVHANVIKFREDLDRIQKLLDAHPYSQE
                     IRDEEIKTLKAYNDALWVEERFLRQKAKVEWLKLGNGNTSYFHKVVKAKNNRSHINAV
                     INNDDVLVEGNELPNGQMDIPILSLKKLRILLEKRCKPNLGLMSLLVEIGHEVLPALD
                     HKLCFSKFEPKSLSISDLGYWGLIAALRRIRVKDWLCSHGGGLGKTLLWIMKCVTSTS
                     FSISINGNLHGHIKGMRGWRQGDPLSPYIFIMVMKILTHLIRRNIQRTENYNFHPKCE
                     TQDIVNVCFADDLFLFSHASQGSVKVIADALEDLKNYSALVSSVLKNLAFFSNVTSSM
                     KHDILSLMPFSEGLLMCKI"
     misc_feature    <682..>927
                     /gene="LOC139842661"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    718..720
                     /gene="LOC139842661"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgagacttc ttaaaaaacc tcttcgaaag ctaatgtgga cgaaagataa tgtgcatgct
       61 aatgttataa agtttaggga agaccttgat cgtattcaga agttattaga tgcacatccg
      121 tactctcaag agattagaga cgaagagatt aaaactctta aggcgtataa tgatgcgttg
      181 tgggtggaag aaagattttt aagacaaaaa gctaaagtgg aatggttaaa gttgggtaac
      241 ggtaatacaa gctattttca taaggtggtg aaagcgaaaa ataatagaag tcatataaat
      301 gcggtgataa ataatgatga tgtgttggtg gaggggaatg aactaccaaa tggtcagatg
      361 gatataccga tactttcttt aaaaaagctt aggatattat tggagaagag gtgtaaaccc
      421 aatttgggtc taatgagtct tttagttgaa attggtcatg aagtgcttcc agcacttgac
      481 cataagttgt gttttagtaa gtttgagcca aaatcactat ccattagtga cttggggtat
      541 tggggtctta ttgcggcact tcgaaggata agggtaaagg actggctttg ctcgcacggt
      601 ggtggtcttg gaaagacgct tttgtggata atgaaatgtg ttacgtccac gtcgttctca
      661 attagcatta atgggaacct tcatggtcat attaagggta tgcgtggttg gagacagggt
      721 gatccgctgt ctccatatat ttttataatg gttatgaaga tccttactca tttgattaga
      781 cgtaacattc agcggacaga gaactataat ttccatccga aatgcgaaac tcaagatata
      841 gtcaatgttt gttttgctga cgaccttttc ttgttttctc atgctagcca aggctcggta
      901 aaggtcattg ctgatgctct tgaagactta aaaaattatt cggcgttggt ttctagtgtc
      961 ctaaagaatt tggcgttctt ttcaaatgta acttcgagca tgaaacatga tatcctctca
     1021 cttatgcctt tctcggaggg cttgttgatg tgtaaaatct ag
//
LOCUS       XM_071832780             783 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842662), mRNA.
ACCESSION   XM_071832780
VERSION     XM_071832780.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..783
                     /gene="LOC139842662"
                     /note="uncharacterized LOC139842662; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842662"
     CDS             1..783
                     /gene="LOC139842662"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688881.1"
                     /db_xref="GeneID:139842662"
                     /translation="MLESHKEATVAERISNVNSTSVGNWNWSRTPSGRAIDELTELTN
                     LISSVSISDCPDSWKFTLDTSGTFTTSSMSSLINTLKYGVYTRNLSLPRNKYVPQKVF
                     IFLWRVIQQKFPVRCELDKKGIDLHTILCALCDQHIETIEHALVNCHKVTSIWVKLLD
                     WWNQNNTLFSNINEAIISDQGFSYNSIGSTLWQATKWITCYILWKHRNLKVFSSKEWN
                     PAMIISEIQTQSFSWLSNRSRKKYQLNGINGSSTLLFTLQRL"
     misc_feature    <280..447
                     /gene="LOC139842662"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgttggaat cccacaaaga agcaactgtt gctgaaagaa tctcgaatgt caactccact
       61 tcggttggaa attggaattg gtctcggaca ccgagtggtc gtgcaataga tgaacttacg
      121 gaactcacta atctaatttc atccgtaagt atttcagatt gccccgattc atggaaattc
      181 actcttgaca catccggcac tttcacaaca tcatcaatgt caagtttgat caatacatta
      241 aaatatggcg tctacactag aaatctatca ctacctcgca acaaatacgt cccacaaaag
      301 gttttcatat tcttatggag agtcattcaa caaaaattcc cagttagatg tgaacttgac
      361 aaaaaaggaa ttgacctcca caccatctta tgcgccttat gcgatcaaca tattgaaacc
      421 atagaacatg cgttggttaa ttgtcataaa gtgacttcaa tttgggtaaa attgctagat
      481 tggtggaatc aaaataacac actattttct aacatcaatg aagctatcat ctccgaccaa
      541 ggtttctcat ataactccat tggatcaacc ttatggcaag ctactaaatg gattacttgt
      601 tacattttat ggaaacatag gaacctaaaa gttttctcaa gtaaagagtg gaaccccgca
      661 atgattatat ccgaaattca aacacaaagt tttagttggc tctcaaaccg atcgcgaaaa
      721 aaataccaat tgaatggcat caatggctca tcaacccttc tttttacatt gcaacgcctc
      781 taa
//
LOCUS       XM_071832781             573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ARS-binding protein 1-like
            (LOC139842663), mRNA.
ACCESSION   XM_071832781
VERSION     XM_071832781.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..573
                     /gene="LOC139842663"
                     /note="ARS-binding protein 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842663"
     CDS             1..573
                     /gene="LOC139842663"
                     /codon_start=1
                     /product="ARS-binding protein 1-like"
                     /protein_id="XP_071688882.1"
                     /db_xref="GeneID:139842663"
                     /translation="MASHLKGVKKTTMTDEIRRTLCKHNKDNPSLTQKQLQEWVHSNY
                     GLQVSQATISNTVKRSLEYLSLAPEKGDVKRHKPAKFSDLEKSLYEWILQYQEHVNMT
                     GELIIEKAKKFIKDMYPVDTPDFTFSIGWLEKFKYRYGIKIFRRFENSGSVEMEGMED
                     KLKFIRDKVDQFEMKDVFNMDEPGLFFYVI"
     misc_feature    25..192
                     /gene="LOC139842663"
                     /note="Fission yeast centromere protein N-terminal domain;
                     Region: HTH_ABP1_N; pfam18107"
                     /db_xref="CDD:407941"
     misc_feature    241..426
                     /gene="LOC139842663"
                     /note="Tc5 transposase DNA-binding domain; Region:
                     HTH_Tnp_Tc5; pfam03221"
                     /db_xref="CDD:460850"
ORIGIN      
        1 atggcttccc atcttaaagg tgtgaaaaaa acaacaatga cagacgagat tcgaagaaca
       61 ttatgcaagc acaacaagga taatccaagt ctcactcaaa agcaattgca agaatgggtt
      121 catagtaact atggtttgca ggtgagtcaa gcgacaatat cgaatacagt taagcggtct
      181 ttagagtatc tctcacttgc tcccgaaaaa ggcgatgtta agcgacacaa accggcaaaa
      241 ttttctgacc tagaaaaatc tctctatgaa tggattcttc aatatcaaga acatgtgaat
      301 atgacaggtg aactaatcat cgagaaggcg aaaaagttta tcaaagatat gtatccagtg
      361 gatactccag actttacttt ttctattggt tggcttgaaa agttcaaata tagatatgga
      421 attaaaattt tccggcgttt tgaaaatagt ggatctgttg aaatggaggg catggaggac
      481 aaattaaaat tcataagaga taaagttgat cagtttgaaa tgaaagacgt ctttaatatg
      541 gatgaaccag gtttgttttt ttatgtaata tga
//
LOCUS       XM_071832783             717 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL16-like (LOC139842665), mRNA.
ACCESSION   XM_071832783
VERSION     XM_071832783.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..717
                     /gene="LOC139842665"
                     /note="large ribosomal subunit protein uL16-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139842665"
     CDS             29..580
                     /gene="LOC139842665"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL16-like"
                     /protein_id="XP_071688884.1"
                     /db_xref="GeneID:139842665"
                     /translation="MKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAG
                     KDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVSIGQVLLSVR
                     CKDGNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYIQWKSENRIMNDGVNA
                     KLLGCHGPLANRQPGRAFLDAVA"
     misc_feature    32..550
                     /gene="LOC139842665"
                     /note="L16 is an essential protein in the large ribosomal
                     subunit of bacteria, mitochondria, and chloroplasts. Large
                     subunits that lack L16 are defective in peptidyl
                     transferase activity, peptidyl-tRNA hydrolysis activity,
                     association with the 30S subunit; Region:
                     Ribosomal_L16_L10e; cl00353"
                     /db_xref="CDD:469737"
     misc_feature    order(38..40,44..49,56..58,104..109,116..118,125..127,
                     137..139,146..148,179..187,191..193,197..199,209..214,
                     260..274,314..316,374..379,386..391)
                     /gene="LOC139842665"
                     /note="23S rRNA interface [nucleotide binding]; other
                     site"
                     /db_xref="CDD:238714"
     misc_feature    83..88
                     /gene="LOC139842665"
                     /note="5S rRNA interface [nucleotide binding]; other site"
                     /db_xref="CDD:238714"
     misc_feature    order(119..127,134..139)
                     /gene="LOC139842665"
                     /note="putative antibiotic binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:238714"
     misc_feature    order(146..148,170..175,179..181,332..334)
                     /gene="LOC139842665"
                     /note="L25 interface [polypeptide binding]; other site"
                     /db_xref="CDD:238714"
     misc_feature    order(254..259,266..271)
                     /gene="LOC139842665"
                     /note="L27 interface [polypeptide binding]; other site"
                     /db_xref="CDD:238714"
     polyA_site      717
                     /gene="LOC139842665"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cccaaagatc cgtatctacg atgttggaat gaagaaaaaa ggagtcgatg agttcccatt
       61 ctgtgtgcat ttggtcagtt gggaaaaaga gaatgtgtct agtgaagcac ttgaagctgc
      121 acgtattgcg tgcaacaagt acatgactaa gtttgctgga aaagatgctt tccacttgcg
      181 ggtccgggtt cacccgtttc atgtacttcg tattaacaag atgttgtcgt gtgctggagc
      241 cgataggctt caaactggta tgagaggggc ttttggtaag ccacagggtg tgtgtgcccg
      301 tgttagtatc ggtcaagttc ttttgtctgt tcgatgcaaa gatgggaaca gtcagcatgc
      361 tcaggaggcg cttaggcggg ctaagtttaa gttccctggt cgtcaaaaga ttattgtcag
      421 caggaagtgg ggatttacta agtttagccg tactgactat atccagtgga agtctgaaaa
      481 ccgcattatg aatgatggtg ttaatgctaa gcttcttgga tgccatggac ctcttgcaaa
      541 ccgtcagcct ggaagagctt tcttagacgc tgttgcataa gttcatctca gaaaaccgtg
      601 ccctttttct tgtttactag aatgtcattt gttgcatttt ctttctcctt tgtgtttggg
      661 ctactccatt gtactgaaag aatactttgt gttatgaact caaaacttat tgggttt
//
LOCUS       XM_071832784            1272 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842666), mRNA.
ACCESSION   XM_071832784
VERSION     XM_071832784.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1272
                     /gene="LOC139842666"
                     /note="uncharacterized LOC139842666; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842666"
     CDS             1..1272
                     /gene="LOC139842666"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688885.1"
                     /db_xref="GeneID:139842666"
                     /translation="MDAVGFGWIKEESSKANFQMWENGESSKCTSATQISKLDFSDPL
                     YLHTNDTTGTPITAVKLKGTKNYNIWSRSMLLALSTKNKIGFINGTIVRSQTDEILAS
                     QLDRCNSVVLSWILGSVIEDLYSGQIFSTNASDVWKELKETYDKIDTSIIYNLHHQIN
                     TLKQAVTSHKDHVKMMQLMQFLMGLNDDTTHKDESSSSASSSAHAVLTNDQLMKLLSL
                     INENATPVDANANMAGMSDIVDISKLKLTVGHLNGTQAKVVKIGNLKISNNVILYDVL
                     VIPEYCDLKAMTTVGTGSQSGGLYLFDDHDLNVVGLSCNVCVHLVSAQLWHARLGHPS
                     VQVLKVLKQKLNLKDIQENCPCDICHKAKQVREPFPLSDHKSQELGDLIHLDLWGPFK
                     IQSRDGYKYFLTIVDDFSRGVVITRKISDLI"
     misc_feature    139..276
                     /gene="LOC139842666"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    175..468
                     /gene="LOC139842666"
                     /note="Ty5 Gag N-terminal region; Region: Retrotran_gag_4;
                     pfam17241"
                     /db_xref="CDD:407356"
     misc_feature    892..1092
                     /gene="LOC139842666"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
ORIGIN      
        1 atggatgccg tcggttttgg atggatcaaa gaggaaagtt caaaagctaa ctttcaaatg
       61 tgggagaatg gtgagagctc aaaatgtact tctgctacac aaattagcaa attagacttt
      121 agtgatccac tctatcttca tacaaatgat acaactggaa cacctattac agctgtaaag
      181 ctaaaaggaa ctaaaaatta taatatctgg agtaggtcaa tgttattagc cttatccaca
      241 aagaataaaa ttggatttat aaatggtact attgtaagaa gtcaaacaga tgaaattctt
      301 gcatcccaat tggataggtg caactctgtt gtcctatcct ggatccttgg gtctgttata
      361 gaagatttgt attctggaca gatcttctct actaatgcat ctgatgtgtg gaaagaatta
      421 aaagaaactt atgacaagat tgatacttca ataatataca acttacatca tcaaattaat
      481 acacttaaac aagcagtcac atctcacaaa gatcatgtaa agatgatgca gttaatgcaa
      541 ttcttaatgg gtttaaatga tgatactact cataaagatg agtcttctag ttctgcttct
      601 agttctgcac atgcagtgtt aacaaatgac cagttgatga agcttcttag tttgataaat
      661 gagaatgcaa cacctgtgga tgcaaatgca aatatggcag gtatgagtga tattgttgat
      721 atatctaagt taaaattaac tgtgggacat ctaaatggaa cacaagctaa agttgtaaag
      781 attgggaact taaaaatttc aaacaatgta atcctatatg atgttttagt tatcccagaa
      841 tactgtgact tgaaggcaat gacaactgta gggactggta gtcaaagtgg tggattatac
      901 ttgtttgatg atcatgattt aaatgtggta ggtttatctt gcaatgtgtg tgttcattta
      961 gtgtctgcac agttgtggca tgcaagactt ggacatcctt cagtacaagt cttgaaagtt
     1021 ttaaaacaaa aattgaatct taaagacatt caagaaaact gtccctgtga catctgccat
     1081 aaggcaaaac aagtcaggga accctttcct cttagtgatc ataaatcaca agagttaggt
     1141 gatttaattc acttggatct ttggggtcca tttaaaatac aaagcagaga tggttacaaa
     1201 tatttcttaa ctattgttga tgatttttct agaggtgttg tgataacccg aaaaatttcc
     1261 gatttaattt aa
//
LOCUS       XM_071832785             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842667), mRNA.
ACCESSION   XM_071832785
VERSION     XM_071832785.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139842667"
                     /note="uncharacterized LOC139842667; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842667"
     CDS             1..846
                     /gene="LOC139842667"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688886.1"
                     /db_xref="GeneID:139842667"
                     /translation="MRAKFFWGSNVHNRKIYWIGWDQSRAGYDKGGLNIGSLRAFNIA
                     FLCKWIWRLKKYPNSIWARMVKAIHGESAGADGTTLMIRGTWSNIVDSFYKSTRNRLL
                     PANVLRAKIGDGHSFRFWHDNWLGNGLLKDRFRRLYHLDSNKYCSVADCVSNGDWSWS
                     WRRSDIGAPNTLLLHSMVTEIGTFQVSNGSDSWLWSLGLDGEYYVANTRNYIDDAILP
                     TSEPFTRWLKCIPRKINVFIWRVAIDSWRKTCGDVYEFGSTSLCRSLTNGQNGSIGST
                     TGEKE"
ORIGIN      
        1 atgcgggcaa aatttttctg gggttctaat gttcataatc gaaagatcta ttggatcggt
       61 tgggatcagt ctcgtgcggg ttatgataag ggtggtttaa atatcgggag tttacgtgcc
      121 tttaacattg cgtttctatg caagtggatt tggaggttaa agaagtaccc gaattcaatt
      181 tgggcgagaa tggtaaaagc tatacacggt gagtctgcag gcgccgatgg tactacactt
      241 atgattagag gtacgtggtc gaatattgtt gattcatttt ataaaagtac tcgtaacagg
      301 ttattgccgg ctaatgtttt gcgggcaaaa attggtgatg gtcattcgtt tcgattttgg
      361 catgacaatt ggttgggtaa cgggttactg aaggatagat tccgacgtct ttatcatcta
      421 gattcgaata aatattgctc tgttgcggac tgtgtgtcga atggtgattg gtcatggtct
      481 tggcgtcggt cagacattgg ggcaccaaac accctattat tacatagtat ggtaactgaa
      541 atcggaactt ttcaggtgtc taatggttca gattcttggt tgtggtcttt gggtttagat
      601 ggagagtatt atgttgctaa tacgcggaac tatattgacg atgctatttt gcccaccagt
      661 gaaccattta ctaggtggct caaatgtatc ccaaggaaga ttaatgtttt catttggaga
      721 gttgctatag atagttggcg aaagacttgt ggagatgttt acgagtttgg gtcgacatca
      781 ctttgtcgga gtttaacgaa tggtcagaat ggatcgattg gttcgacaac tggagagaaa
      841 gaatga
//
LOCUS       XM_071832786             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842668), mRNA.
ACCESSION   XM_071832786
VERSION     XM_071832786.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139842668"
                     /note="uncharacterized LOC139842668; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842668"
     CDS             1..570
                     /gene="LOC139842668"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688887.1"
                     /db_xref="GeneID:139842668"
                     /translation="MIIWNETWIGNEKLKHKFKRLSRLETKIEASISERLSWDGIKCE
                     GTWSWLRAPRGRASDELRLLKTLISDVKFNPQTRDSWKWKAGGNEIFTTKALTTLINS
                     RVLTPSNSPCETLCNKMVPKKLEVFVWRVRKKRMSVLVELDKRGIDLHSVRCPLCDDA
                     IETVDHSLILCKYAFHVWCKDFDWWVAGE"
     misc_feature    271..531
                     /gene="LOC139842668"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgataattt ggaatgagac ttggattggt aacgagaaac taaagcacaa attcaagaga
       61 ttgtcaagac ttgaaacgaa aatagaagct tcaattagtg aaagactctc atgggatggt
      121 ataaagtgtg aaggtacttg gtcgtggcta agagcaccaa gaggtagagc gagtgatgaa
      181 ctacgacttt tgaagacctt gatctcggac gtgaagttca atcctcaaac acgggactcg
      241 tggaaatgga aagcgggtgg taacgagatt tttacaacaa aagcactaac aacccttatt
      301 aactcaagag ttctaactcc aagtaactct ccttgtgaaa ccttgtgtaa caaaatggtc
      361 ccaaaaaaac ttgaagtatt tgtatggaga gtgaggaaaa agcgcatgtc ggtgttagtg
      421 gaacttgaca aaagaggtat tgatctacat tcggtccgat gtcctttatg cgatgatgcc
      481 attgaaacgg ttgatcattc tcttattttg tgcaagtatg ctttccatgt gtggtgcaaa
      541 gatttcgatt ggtgggtcgc gggagaataa
//
LOCUS       XM_071832787            4556 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842669), mRNA.
ACCESSION   XM_071832787
VERSION     XM_071832787.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4556
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..4556
                     /gene="LOC139842669"
                     /note="uncharacterized LOC139842669; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842669"
     CDS             369..4556
                     /gene="LOC139842669"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688888.1"
                     /db_xref="GeneID:139842669"
                     /translation="MKEVDRSVNSIDIVKKKSSSGCLIIKKKVPVPVPDCVGGVKGFS
                     DSSSRNLFSSLKDKKRPRQIRSDSESSEDGFTEPNRRKVDNFQSGSGFGNVGFRENRG
                     LETRERLNLNNLIDVHEFDERDGFRDKRVKVRNDGYDFTHRMNSNRQNGDDKASGSGG
                     SSSRKIYDYRKDFVDDNRSGNFGAQSSRFTHGIKSHYKMEDNEPRLPILSSSGRNREV
                     SDQPIRLQGKNGVLKVMVKKHKPISIPQQSYDRVEFADRKESIPVLYKEKHPNVPHKV
                     NDHYEDTIKNKKVAMGSSLYSTLNRPEKPVSSKKRDLELTTNESETPLPLKVSSMQRS
                     VPEKKVKSEQRVNVQTKTLTPVKGKETKVVKRGTGTEKQLLREKIRSMLLSAGWTIDY
                     RPRRNRDYLDAVYINHSGTAYWSIIKAYEAFQKEEKDRSRVLPAETLSKLTRQTRKKI
                     ERDLKKRRDEEGAETSKRRLVEVSQDNEDDDVDDDDDDSNDSYYGVTDKVKNVGANAD
                     TVCARKSNKLGGRTSLIRSDGIKHENDQSGHDSGKLTLLSWLIDSGKVKMCEKVQYMT
                     ERKTMVMKEGWITKEGIRCCCCNKILTVSKFEVHAGSKLCQPFLNIFVESAGQSLMKC
                     LIDAWNKQEGLERIGYHSVNVNGDDPNDDTCGLCGDGGDLICCDGCPSTFHQTCLGIQ
                     MLPKGDWHCPNCSCKYCEMANMSVGPESPLLVCALCEKKYHESCSMELDKPIDPNLSF
                     CSHKCLQVYGHLKKLIGVKHELGSGLSWSLIRRSDISSDTCSSRELAQRVECNSKLAV
                     ARSVMDECFLPVIDRRSGINLIHNVVYNCGSNLSRMNYSGFLTAISEIGDELVSAASI
                     RIHGTQLAEMPFIGTRHMYRRQGMCSRLLSTIQSVLSSIGIEKLVIPAIAENMDAWTG
                     VGGFKPLEESHKHELKSMNILVLPGIAMLQKPLVSAKGSLRRHTPSIDVEKSEPNSVD
                     DKESVQKLAPAMENFEPDSNDDKASVEKKAPAMEKFELNSFDGKESVEKDSSTTEISE
                     PNSFEDRESLEKKASTIVEKSETNSVDDKESVEKNAPSEMEKSELNSSDDKEFVEKNA
                     PPATEKSEPNSFDGKESVERNVPTIEKSEPISFDDKESVEKNVPAAGEFEPNSSDDKE
                     TVEKNAPTIEKSEPNSVDGKESVEKKEMALAMEKFEPNSFNDKDYVEKNVHAMEKSEP
                     NSFDGKESNAPVMEKSEPISSDDKQSVEKKATALEKSETNSFDDNESVAKNASPTEKS
                     ELNSFDEKESVAKNAPMEEKSEPSSHDDNESADKTAPTTEKSEPDSFKDGESSEKKVP
                     TDSYPQYPPNSLQVLARKDTAVHLDGDQCHTRRPLPELVSHMYMNLYGGFVGKGDDLL
                     TMLFAVVKFGNAKEFCK"
     misc_feature    2094..2252
                     /gene="LOC139842669"
                     /note="Tify domain binding domain; Region: TDBD;
                     pfam16135"
                     /db_xref="CDD:465033"
     misc_feature    <2310..>2588
                     /gene="LOC139842669"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]; Region: COG5141"
                     /db_xref="CDD:227470"
     misc_feature    2331..2450
                     /gene="LOC139842669"
                     /note="PHD finger 2 found in class II
                     Chromodomain-Helicase-DNA binding (CHD) proteins; Region:
                     PHD2_CHD_II; cd15532"
                     /db_xref="CDD:277007"
     misc_feature    order(2355..2369,2379..2381,2433..2435)
                     /gene="LOC139842669"
                     /note="putative histone H3 binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:277007"
     misc_feature    <3252..4175
                     /gene="LOC139842669"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional; Region: PTZ00341"
                     /db_xref="CDD:173534"
ORIGIN      
        1 tatgtttgag aagtccaact aaatacatcg gagaaagagg gttttgccgg aaaaggttac
       61 aaactacaga tacctacctg acatctcttt caacgccccc actcacatcc aatccaatcc
      121 aactactctg attcaattca tcctcaattt ccctaatttt tcactaaatt attggtaaga
      181 aaacctaact ttcttaaata cataatcaat ttcattattc tcgattctta atttcatatg
      241 taattcgaat ttcaaattgt aaccctagat ctgtaaacaa tttcaatcgt ttccatgtct
      301 atgacgctgg attcaaaaga atcttgatag aatttaggat ttcctttttt aattttttaa
      361 ttaacgagat gaaagaagtg gacagatctg ttaattctat agatatagta aaaaagaaaa
      421 gttcatctgg gtgtttaata attaaaaaaa aggtaccagt accagtacca gattgtgttg
      481 gtggagttaa agggtttagt gattcatctt ctagaaactt gtttagctcc ctaaaggata
      541 aaaagagacc tagacagatt cggagtgatt ccgagtctag cgaagacgga tttaccgagc
      601 cgaatcgtcg aaaagtcgat aactttcaga gcggttcggg atttggtaat gtggggttta
      661 gggaaaacag aggattagag actcgagaaa ggttgaattt gaataatttg atagatgtgc
      721 acgaattcga tgagcgtgat ggatttcggg ataaaagggt taaggttagg aatgatggtt
      781 atgattttac gcatcggatg aattcaaatc ggcaaaacgg ggatgataag gcttctggaa
      841 gtggtggtag tagtagtagg aagatatatg attaccgaaa ggactttgtc gatgataatc
      901 ggagtggtaa ttttggtgca cagagtagta gatttactca tggtatcaaa agtcattaca
      961 agatggaaga taacgagcca cgtttaccta ttttgtcatc gagtgggaga aatcgagaag
     1021 tttcggatca accaattagg ttacagggca aaaacggcgt tttgaaagtg atggtaaaga
     1081 aacataaacc gataagtata ccgcaacaaa gttatgatcg tgtagaattt gcggatcgaa
     1141 aagaatcaat accggtactt tacaaggaga aacatccgaa cgtaccgcat aaagtcaacg
     1201 atcattatga agatactatt aagaataaaa aagtggctat ggggtcttca ttgtactcta
     1261 ctttaaaccg tcccgaaaaa ccagtttcat ccaagaaacg cgacctggaa ttgacaacta
     1321 atgaaagtga aacgccgtta ccgttaaaag tatctagtat gcagcgttct gttcctgaaa
     1381 aaaaggttaa aagtgaacaa agagtaaacg tgcaaacaaa aactttaact ccggttaaag
     1441 ggaaggaaac taaggttgtt aagcgaggga ctggcactga aaaacaatta ctaagagaaa
     1501 aaattcggag tatgcttctt agtgcgggct ggaccattga ttatagacca agaagaaaca
     1561 gagactattt agatgcagtt tatataaatc attcgggaac tgcttattgg tcgattatta
     1621 aagcttacga agcttttcaa aaggaggaaa aagatcgttc tcgagtttta cccgctgaaa
     1681 cactcagtaa gttaactaga caaacccgta agaaaatcga aagagatttg aaaaagagac
     1741 gagacgaaga gggtgcggaa acatctaaaa gacgattagt ggaagttagt caggataacg
     1801 aagatgatga tgttgatgac gatgatgatg attcgaatga tagttattat ggggtaacag
     1861 ataaagtgaa aaacgttggg gctaatgcgg atacggtatg tgcacgtaaa agcaataaac
     1921 ttggcggacg tacttcgtta atacgcagtg acgggataaa acatgaaaac gatcagtctg
     1981 gtcatgattc gggaaaactt actttgcttt cttggttaat tgactctgga aaggttaaaa
     2041 tgtgcgaaaa ggttcagtat atgaccgaaa ggaagacgat ggtaatgaaa gaaggttgga
     2101 ttacaaaaga aggaattcgt tgctgttgtt gtaacaaaat tttgacagtt tcgaagtttg
     2161 aagttcacgc gggaagtaaa ctttgccagc cgtttttgaa catttttgta gagtcagcgg
     2221 gacaatcttt gatgaaatgt ttaatcgatg cgtggaataa acaagaaggt ttagaaagaa
     2281 tcgggtatca tagtgttaat gttaatggag acgatcctaa tgatgatacg tgtggattat
     2341 gcggtgatgg tggtgatttg atttgttgtg acggttgtcc gtccaccttt catcagacct
     2401 gtttagggat acagatgctt cctaaaggag attggcattg tccaaattgt tcgtgcaaat
     2461 attgtgaaat ggccaacatg agcgttggac ctgagagtcc acttcttgta tgcgccctct
     2521 gtgagaaaaa atatcatgaa tcatgcagca tggaattgga taaacctatt gatccaaatc
     2581 tatccttctg tagccacaag tgcctacagg tatacgggca cttgaagaag cttattgggg
     2641 tgaaacatga actcggttca ggattatcat ggtctcttat tcgtagatca gatatatcgt
     2701 cagatacgtg ttcatcgaga gaattagctc agagggtgga atgcaattct aagctagctg
     2761 ttgctcgttc agttatggat gagtgctttt tgcctgttat tgacaggaga agcgggatca
     2821 atttaatcca caacgtcgtc tataattgtg gatcgaactt gagccggatg aactatagtg
     2881 gttttttaac agctatttcg gagatcggtg atgaattggt ttctgctgcg tcgatcagga
     2941 tccatgggac ccaactagca gagatgccgt ttatcgggac ccgccatatg tacagacgac
     3001 aaggaatgtg cagccggtta ttatctacta ttcaatcagt gctgtcttcg attggtattg
     3061 agaaattggt tattcctgct attgctgaga acatggatgc atggactggt gttggtggtt
     3121 ttaaacctct cgaggaatca cacaaacatg aattgaaatc tatgaatatt ttggtgttac
     3181 ctggaattgc tatgttgcag aaaccactag tttcagcgaa aggttcacta agaagacaca
     3241 cgccaagtat tgatgtggaa aaatcagaac caaattcggt tgatgataaa gaatctgtac
     3301 agaaattggc tcctgcaatg gaaaacttcg aaccggattc taatgatgat aaagcttctg
     3361 ttgagaaaaa ggctcctgca atggaaaaat ttgaactgaa ttcttttgat ggtaaagaat
     3421 ctgtagagaa agattcttct acaactgaaa tatcggagcc gaattctttt gaggatagag
     3481 aatctttgga gaaaaaagct tctactatag tggaaaaatc agaaacgaat tcggttgatg
     3541 ataaagaatc tgtagagaag aatgctccat ctgaaatgga aaaatcagag ctgaattcat
     3601 ctgatgataa agaattcgta gagaagaatg ctcctcctgc aacggaaaaa tccgaaccaa
     3661 attctttcga tggtaaagaa tctgtagaga gaaatgttcc tacgattgaa aaatcagagc
     3721 cgatttcttt tgatgataaa gaatctgtag agaaaaatgt tcctgcagcg ggagaattcg
     3781 aaccaaattc ttctgatgat aaagaaactg tagagaaaaa tgctcctacg attgaaaaat
     3841 cagagccgaa ttcggttgat ggtaaagaat ctgtagagaa aaaggaaatg gctcttgcaa
     3901 tggaaaaatt cgaaccgaat tcttttaatg ataaagatta tgtagagaaa aatgttcatg
     3961 caatggaaaa atcagagccg aattcttttg atggtaaaga atctaatgct cctgtaatgg
     4021 agaaatcaga gccgatttct tctgatgata aacaatcagt agagaaaaag gctactgcgt
     4081 tggaaaaatc cgaaacgaat tcttttgatg ataatgaatc tgtagcgaaa aatgcttctc
     4141 caacggaaaa atccgaactg aattcttttg atgaaaaaga atctgtagca aaaaatgctc
     4201 ctatggagga aaaatcagaa ccaagttctc atgatgataa tgaatctgca gataaaactg
     4261 ctcctacaac ggaaaaatca gagccagatt ctttcaagga tggagaatct tcggagaaaa
     4321 aggttcctac agattcctat cctcaatatc cacccaattc gttgcaggtt ttagcaagaa
     4381 aggatactgc tgttcacctt gacggtgatc agtgccatac tcgaagacca ctaccagaac
     4441 ttgtatctca catgtacatg aatctctatg gaggttttgt ggggaaagga gacgatcttc
     4501 taaccatgtt atttgcagtt gtgaaatttg ggaatgcaaa ggaattttgc aaatga
//
LOCUS       XM_071832788             939 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxidase 5-like
            (LOC139842670), mRNA.
ACCESSION   XM_071832788
VERSION     XM_071832788.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..939
                     /gene="LOC139842670"
                     /note="peroxidase 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842670"
     CDS             1..939
                     /gene="LOC139842670"
                     /codon_start=1
                     /product="peroxidase 5-like"
                     /protein_id="XP_071688889.1"
                     /db_xref="GeneID:139842670"
                     /translation="MGLDTAEAQSSLKFGFYKTTCPTAEQIVRDTVNETVTLNPGMAA
                     GILRLYFHDCFVRGCDASLLIKTVPGNEIESEQDSGANAGTLRGFDIIDQAKAKLEAA
                     CPNTVSCADILAFAARDSTTTVGGFSYAIPSGRRDGRTSNIGEVNLPSPASDLNALKR
                     AFIAKGLSVVDIIALSGAHSIGRAGCNFVTPRLYSFNGTRGADPLLDPKYAAFLKTKC
                     PKSSGISSGTTDLDPVSGNRLDNQYYRNLKQHRVLFSSDETLLDSAMTARLVANYAND
                     SNAWRRDFVAAMVRLGSVGVLTGTKGEIRKNCGAIN"
     misc_feature    34..933
                     /gene="LOC139842670"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; Region: secretory_peroxidase; cd00693"
                     /db_xref="CDD:173827"
     misc_feature    order(121..123,130..135,139..144,151..156,250..252,
                     259..261,445..456,472..474,484..486,514..516,523..528,
                     532..537,541..555,559..564,691..693,760..762,766..768,
                     862..864)
                     /gene="LOC139842670"
                     /note="active site"
                     /db_xref="CDD:173827"
     misc_feature    order(121..123,130..135,139..144,151..153,244..246,
                     250..252,259..261,445..453,472..474,484..486,514..516,
                     523..528,532..537,541..555,562..564,691..693,760..762,
                     766..768,862..864)
                     /gene="LOC139842670"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:173827"
     misc_feature    order(142..144,238..243,445..456,553..555,559..564)
                     /gene="LOC139842670"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173827"
     misc_feature    order(157..159,166..168,178..180,184..186,538..540,
                     694..696,703..705,712..714,718..720)
                     /gene="LOC139842670"
                     /note="calcium binding sites [ion binding]; other site"
                     /db_xref="CDD:173827"
ORIGIN      
        1 atgggtttag atacagcaga agctcagtcg tcgttaaaat ttggttttta caaaaccacg
       61 tgccctaccg cagagcagat tgtgcgagat acagtgaatg aaacagtcac attaaacccg
      121 ggaatggctg ccggaatact tcgactttat ttccatgact gctttgtcag gggttgtgac
      181 gcttcacttc taattaaaac ggtaccaggc aacgaaatcg agtcagagca agattccgga
      241 gcaaatgccg gaacattaag aggattcgac ataatagatc aagcaaaggc aaagctcgaa
      301 gctgcgtgtc caaacactgt ctcatgtgca gacattttgg ctttcgctgc tcgagatagt
      361 acaaccactg ttggtggatt ctcttacgct atcccttctg ggcgacgtga cggaagaact
      421 tcaaatatag gcgaagtcaa ccttccatca cccgcctctg acctaaatgc ccttaagcgc
      481 gcatttatag ctaagggttt gagcgtcgtg gatattattg ccctctccgg ggcccactct
      541 atcggtagag cagggtgcaa ctttgttaca ccccgtctct actcatttaa cggaacacgc
      601 ggtgctgatc ctttgctaga tccaaaatat gcagcgtttt tgaaaacaaa atgccccaag
      661 agtagtggga tatcatctgg gaccacagac cttgatcctg tgagtgggaa tcgtcttgat
      721 aatcaatatt atcgtaattt gaaacaacat cgcgttttgt tctcttcaga tgaaacttta
      781 ctagatagtg caatgacagc aagattggtt gccaattatg caaatgactc gaatgcttgg
      841 agaagggatt ttgttgcagc aatggttcga ttaggttctg ttggtgtatt gacagggacg
      901 aaaggagaga ttcgtaagaa ctgtggggct ataaactaa
//
LOCUS       XM_071832789            1143 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842671), mRNA.
ACCESSION   XM_071832789
VERSION     XM_071832789.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1143
                     /gene="LOC139842671"
                     /note="uncharacterized LOC139842671; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842671"
     CDS             1..1143
                     /gene="LOC139842671"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688890.1"
                     /db_xref="GeneID:139842671"
                     /translation="MRSYHLSNGPPRCAFKVDIQKAYDTVEWSFLESNLVRFGFHQTM
                     IRWIMKCVTTVSYSININGDLHGYFKGKRGLRQGDPMSPYLFTLVMEVLTLLLVRNAC
                     LSDFRYHPNCEEHEIINLCFADDLFIFSHADYNSVQIINAALEQFKDWSGLVPSMPKS
                     TAFFANVTNSLKEQILGRVQLINSVLSSMQLHWQSVLLLPSAIIKEIECLMRGFLWCQ
                     GDMKKGKAKVKWAHVCLPKEEGGLGIRRLKTWNIALLTTHWKDRSGNNCDFSIKHVWE
                     SLRPTAPQVHWFSIVWHPYCIPRHAFVLWLLMGEKLKTQDSLQAWEISQGDVITCALC
                     NMVPDSHDHLFFSCGFASRVWSLVLQHCEFVTFLLLPMHGRILRIY"
     misc_feature    <10..561
                     /gene="LOC139842671"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(52..69,229..234,364..366,370..375)
                     /gene="LOC139842671"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(52..69,229..231,370..372)
                     /gene="LOC139842671"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    232..234
                     /gene="LOC139842671"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    805..1062
                     /gene="LOC139842671"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcgaagtt atcatttatc gaatggtcct ccgcgttgtg ctttcaaagt ggacattcaa
       61 aaggcttacg atactgttga gtggtctttc ttggagtcta accttgtgcg gtttggtttt
      121 catcagacta tgattcggtg gattatgaaa tgtgttacga cggtctctta ttccataaat
      181 attaatggtg atcttcatgg gtactttaaa ggaaaaagag gtttacgtca aggtgatcca
      241 atgtctccgt atttgttcac gcttgtcatg gaggttctta ctcttctctt ggtccgtaat
      301 gcttgtcttt ctgattttcg gtatcatcct aattgtgaag aacatgagat tattaatctc
      361 tgttttgcgg atgacctctt tattttttca catgccgatt acaactctgt tcaaattatt
      421 aatgcggcat tggaacagtt taaggattgg tctggtctgg tgcctagcat gccgaaaagc
      481 actgcttttt ttgccaatgt tacgaacagc ttgaaagaac agattcttgg tcgggtgcag
      541 ttaattaact cagttttatc ttccatgcaa cttcattggc aatcagttct tcttcttcca
      601 tcggccatta taaaagagat tgaatgtcta atgagaggat tcttgtggtg ccaaggggat
      661 atgaagaagg ggaaagctaa agtgaaatgg gctcatgttt gccttcccaa ggaagaagga
      721 ggtctgggta ttagacgttt aaaaacctgg aatattgctc ttcttactac tcattggaag
      781 gatcgaagcg gaaacaactg tgatttttcg attaaacatg tatgggaatc attacgtcca
      841 acagctcctc aagttcattg gttctcgatt gtttggcacc cctattgtat ccctagacat
      901 gctttcgttt tatggcttct catgggggaa aagctaaaga ctcaagatag tttgcaagcg
      961 tgggagatca gtcaagggga tgtaattaca tgtgcgcttt gtaacatggt cccagattca
     1021 catgatcatc tttttttctc atgcggtttt gcttctcgtg tttggagtct ggtgttgcag
     1081 cattgtgagt ttgtgacttt cctattacta cccatgcatg gaaggatttt acgcatttat
     1141 tga
//
LOCUS       XM_071832790             513 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842672), mRNA.
ACCESSION   XM_071832790
VERSION     XM_071832790.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..513
                     /gene="LOC139842672"
                     /note="uncharacterized LOC139842672; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842672"
     CDS             1..513
                     /gene="LOC139842672"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688891.1"
                     /db_xref="GeneID:139842672"
                     /translation="MTDVLKYGAITYFVPNFVLYLDHESLKYIHGQHKLNPRHAKWVK
                     ILQGYTISINHQGVLNKFADALSRKYSLLSTMSVQVTGFDQWRDMYKSDMDFKNICEK
                     CSLGPFGSILNCDCYLFKNSQLCVLGGSIREAIITKVRAGGLAAHFGMNKTLAGIKMV
                     LLATHGTRCE"
     misc_feature    <49..210
                     /gene="LOC139842672"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgacggatg tcttgaagta tggcgccatt acttacttcg tgccaaattt tgttctatat
       61 ttggatcatg aatcgcttaa gtacatccat gggcaacata agcttaaccc ccggcatgct
      121 aaatgggtca agatattaca aggttacacc atttctatca accatcaagg ggtgctgaac
      181 aaatttgcgg acgcattaag caggaagtat tcgctactta gtactatgag cgttcaagta
      241 acgggttttg atcagtggcg tgacatgtac aaaagtgaca tggactttaa aaatatatgt
      301 gagaagtgct ctcttggacc attcggttcc atcttaaact gtgattgtta tttatttaaa
      361 aactcccagc tttgcgttct aggtggctcc attcgggaag caattataac caaggttcgc
      421 gcaggaggtt tggcggctca ttttggaatg aataaaaccc ttgcagggat aaagatggtt
      481 ttattggcca cacatggaac gagatgtgaa tag
//
LOCUS       XM_071832791             348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides serpin-Z4-like
            (LOC139842673), mRNA.
ACCESSION   XM_071832791
VERSION     XM_071832791.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..348
                     /gene="LOC139842673"
                     /note="serpin-Z4-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:139842673"
     CDS             1..348
                     /gene="LOC139842673"
                     /codon_start=1
                     /product="serpin-Z4-like"
                     /protein_id="XP_071688892.1"
                     /db_xref="GeneID:139842673"
                     /translation="MKDFEKLKQDNYIFLPYEKDGLHDLLHVFHSNNDLFHDEYELTM
                     RYLNELWVPKFKKSCKFEAQDVMKQMGMTLPFEPLNMDLTRIVDSTHPDADKLYVSNI
                     VQQSFIEVEEKGT"
     misc_feature    <34..345
                     /gene="LOC139842673"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     Region: serpin; cl38926"
                     /db_xref="CDD:476815"
ORIGIN      
        1 atgaaagact ttgaaaagtt aaaacaagac aattatatct ttctcccata cgagaaagat
       61 ggattgcatg atcttttaca tgtgtttcat tcaaataacg atttatttca tgacgagtat
      121 gaacttacta tgcggtattt gaatgagcta tgggtaccta agttcaagaa atcttgtaaa
      181 tttgaagctc aagatgttat gaaacaaatg ggaatgacat tgcctttcga gcctctgaat
      241 atggatctaa cccggattgt agattccaca catcctgatg cagataagct ctatgtctca
      301 aacatagtgc aacaatcttt tattgaagtt gaagaaaaag gaacctaa
//
LOCUS       XM_071832792            1023 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842674), mRNA.
ACCESSION   XM_071832792
VERSION     XM_071832792.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1023
                     /gene="LOC139842674"
                     /note="uncharacterized LOC139842674; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842674"
     CDS             1..1023
                     /gene="LOC139842674"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688893.1"
                     /db_xref="GeneID:139842674"
                     /translation="MAHKLNDKILRKAKKAPSGRQVMRLLRKMRVESGSGKCTEEMLW
                     VRKAKHFLVTCPDKKKNGGNACGRAFNINVRDAEEDPELVNGTFSVNNLLVHVLFYSG
                     ADLSFVFNELSPKIITPLSPLDRKYTVKVTNGNILKGEKVYRNCRITLADRSFEVDLI
                     PIKLGSFDIIIGMDWLSKNRAEIVCYDKAIRIPQGEEEPLMIFGDKKCKQLNLISCLK
                     VRKYLRKACHAILAHVSKPYPKEKDLSDVAIFRDFTKVFPEDLPELPLHRVVEFQIDL
                     TPGAAPVAHTPYRLAPSKLQELASQLQELLEKGFIHPSSSPWELLFYLLNRRMARSDC
                     VLITER"
     misc_feature    199..594
                     /gene="LOC139842674"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(298..300,304..306,310..312,385..393,508..510)
                     /gene="LOC139842674"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    298..306
                     /gene="LOC139842674"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    298..300
                     /gene="LOC139842674"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(385..396,406..417)
                     /gene="LOC139842674"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggcacata agttaaatga caagatcttg cgtaaggcaa agaaggctcc atctgggaga
       61 caagtgatga ggttgttaag aaagatgaga gtggaaagcg gaagtgggaa gtgcaccgaa
      121 gaaatgttat gggtgcggaa agccaagcat tttcttgtca catgcccaga taagaagaaa
      181 aatggtggga acgcgtgtgg gagagcgttc aacatcaatg ttagagatgc tgaagaggat
      241 ccagagttgg ttaatggtac gttttcagtc aacaatttac tggttcatgt cttattttat
      301 tctggtgcgg atttaagttt tgtgtttaac gaactaagtc caaaaatcat cactccatta
      361 tcgcccttag acagaaagta tactgtaaag gtaactaatg gtaatatact taagggtgag
      421 aaagtgtatc gtaactgtcg tataactttg gctgatagaa gttttgaggt ggatttgata
      481 cctattaagc taggaagttt tgatatcata atcggtatgg attggttatc taagaatcga
      541 gctgagatcg tttgctatga taaagcaatt cgtattcctc aaggtgaaga agaaccacta
      601 atgatctttg gtgataagaa atgcaagcaa ttaaatctta tcagctgttt gaaagtccgt
      661 aagtatctta gaaaagcttg tcatgctatc cttgctcatg tgagcaaacc atatccaaaa
      721 gagaaagatt tgagtgacgt agcaatcttc agagacttta ccaaagtgtt tccggaggat
      781 ttacccgaac ttccactgca ccgagtggta gagtttcaaa tcgatcttac ccctggagct
      841 gcgcctgtag cccatacgcc ctacagactt gctccatcca aactccaaga acttgcgagt
      901 caacttcaag aattattgga gaagggtttc attcatccta gctcttcccc gtgggagctc
      961 ctgttctatt tgttaaacag aaggatggct cgttcagatt gtgtattgat tactgagagg
     1021 tga
//
LOCUS       XM_071832793             267 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842675), mRNA.
ACCESSION   XM_071832793
VERSION     XM_071832793.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..267
                     /gene="LOC139842675"
                     /note="uncharacterized LOC139842675; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842675"
     CDS             1..267
                     /gene="LOC139842675"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688894.1"
                     /db_xref="GeneID:139842675"
                     /translation="MSGAQGTLPPGSTTATTYHSVQGGENKSRMDIHSKDDEGKVQID
                     KMQDKVEDCAGRGGPIFGDAVDETVQAQEQGRRDKPDPGVTGTG"
     misc_feature    4..264
                     /gene="LOC139842675"
                     /note="Seed maturation protein PM41 and related proteins;
                     Region: PM41-like; cd23010"
                     /db_xref="CDD:467862"
ORIGIN      
        1 atgtctggag ctcaaggaac attgccgcct ggaagcacaa cagcgacaac ataccattcc
       61 gtacaaggag gagagaacaa gagtagaatg gatatacact caaaggatga tgagggtaaa
      121 gttcagattg ataagatgca ggacaaggtc gaagactgcg ctggccgtgg tgggcccatt
      181 ttcggcgatg cggtggatga aactgtccaa gctcaagaac aaggacgtcg cgataaaccg
      241 gaccctggtg tcacgggcac gggatag
//
LOCUS       XM_071832794            1248 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative protease Do-like 14
            (LOC139842676), mRNA.
ACCESSION   XM_071832794
VERSION     XM_071832794.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1248
                     /gene="LOC139842676"
                     /note="putative protease Do-like 14; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842676"
     CDS             1..1248
                     /gene="LOC139842676"
                     /codon_start=1
                     /product="putative protease Do-like 14"
                     /protein_id="XP_071688895.1"
                     /db_xref="GeneID:139842676"
                     /translation="MSRQTLTNACNRAFVSDFDWGVGQCETQEGGGSEVRWRSLIGNG
                     RCLFRWTSSNATKNGNGNTAIRLLSGVFGVPDRLQRGCSGGDTNGLMKVNAGICNPKS
                     ISRMIALAVAGGAGWLYSNSSADFSVQLYPNFTNKLHPILSRMDSAASNGSNKDSSGK
                     VGGGSKSIADAAADVLPALVYITLNKNRGKDVLTIAGSGTIIDPNGTILTCAHLFSNY
                     DGLEVALNGTVNVTLQDGRSFVGTILNTDIHYDVALVKIDGATPFSAAKLGSSSKLRP
                     GDSVLALGSPLGLKNTVTAGIVSCVNRASCDIGSGGMLRQYIQTDCATYHGSSGGPLV
                     NLYGEVIGVNTGGYDRSGYNFAVPIDPILKIMEQFKKNGTVIRPWLGMKMVDLDEICI
                     SQLKNGNPKFPRVKKGVLVVMEY"
     misc_feature    589..>1236
                     /gene="LOC139842676"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; Region: DegQ;
                     COG0265"
                     /db_xref="CDD:440035"
ORIGIN      
        1 atgtcaagac aaacgctcac aaacgcctgt aatagagcgt ttgtgagtga ttttgattgg
       61 ggtgttggtc aatgtgaaac acaagaggga ggaggaagtg aggtgaggtg gcggtctctg
      121 attggcaacg gccgttgcct attccgttgg accagctcga acgccacgaa aaatggaaac
      181 ggcaacaccg cgatacggct tctgtccggc gtttttgggg tgccagatag gctgcaacgg
      241 ggttgtagcg gtggcgatac aaatggtcta atgaaggtaa atgctggaat ctgtaatccg
      301 aaatctatca gtaggatgat cgcgttagcc gtagcaggtg gcgccggttg gttgtactcc
      361 aacagtagcg ctgattttag tgtgcagctg tatcccaatt ttacaaataa attacatcca
      421 attctttcta ggatggattc tgcagcatct aacggttcaa acaaagattc ttcaggaaaa
      481 gttggtggtg gttcaaagtc tattgctgat gctgcagccg atgttttacc tgcgcttgtc
      541 tacataactc ttaataaaaa tcgaggaaag gatgtgctta ctattgcagg ttcgggaaca
      601 ataatcgacc ccaatggaac tattttgact tgtgcccacc ttttttcaaa ttatgatggc
      661 ctggaagttg cattaaatgg gacggtcaat gtgacattgc aagatggtag atcgtttgtt
      721 ggcaccatct taaatacaga tatacattat gatgttgctt tagtgaagat cgatggtgca
      781 actccttttt cagctgcaaa acttggctcg tcaagtaagc tacgccctgg agattcggtg
      841 cttgctttgg gttctcctct tggccttaaa aatacagtga cagctggcat tgtaagttgt
      901 gttaaccgtg caagctgcga cattggctcg gggggaatgc taaggcagta cattcagaca
      961 gattgtgcta cctatcatgg aagttctggt ggaccccttg tgaatcttta tggagaagtc
     1021 ataggagtaa atacgggcgg gtacgatcgt agtggttata attttgctgt acccatcgac
     1081 cctattttga aaattatgga gcagttcaag aaaaatggga ctgtcattcg accgtggctt
     1141 ggaatgaaga tggttgatct ggatgagata tgcatttccc aactgaaaaa tggaaatcct
     1201 aaattcccta gagtcaaaaa aggggttctt gttgttatgg agtattaa
//
LOCUS       XM_071832795             672 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842677), mRNA.
ACCESSION   XM_071832795
VERSION     XM_071832795.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..672
                     /gene="LOC139842677"
                     /note="uncharacterized LOC139842677; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842677"
     CDS             1..672
                     /gene="LOC139842677"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688896.1"
                     /db_xref="GeneID:139842677"
                     /translation="MLESSSKTPLIDVTNSCSSFTGDGSLGHDIEELGIEFTNSFKKI
                     VGNGKDTLFWNDVWLDDVPLCTKFNRLFRADSNPKASIFDRVGWDGTNCVWSWNWVRL
                     LHGQTKAEFEDLLRLLQEFKYETNNEDGWQWSLASNGKFTTKVLTSLIQAKIGVGNET
                     LRNSLVPKEVGIFVWRALKSRLPFLYELDKREIDLRSVRCPLCDDAIETAQHSIYQCS
                     KCVEI"
     misc_feature    <484..654
                     /gene="LOC139842677"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgttggaat catcatctaa aacgcctttg attgatgtta cgaattcatg ttcatcgttc
       61 acaggtgatg gttctctggg acatgatatt gaagagcttg gcatcgagtt cacaaattct
      121 ttcaagaaga ttgttggtaa tggaaaagac accttatttt ggaatgacgt ttggcttgat
      181 gatgttccac tttgtacgaa gttcaataga ttatttcggg ccgattctaa ccctaaggcg
      241 tcaatatttg atcgtgtggg gtgggatggg acaaattgcg tttggtcatg gaattgggtg
      301 aggttacttc atgggcaaac aaaggcggaa tttgaagact tgttaaggtt gctacaagag
      361 ttcaaatacg aaaccaataa tgaagacggg tggcaatgga gtctagcttc aaatggtaaa
      421 ttcacaacaa aagttcttac aagtcttatt caagcgaaga ttggtgtggg aaatgaaact
      481 ttaaggaatt cgttggtacc aaaagaagtt gggatatttg tttggcgcgc tttgaagagt
      541 agattaccgt ttttgtatga acttgacaag cgagaaattg atcttcgctc cgtccgatgt
      601 ccactatgtg atgatgctat tgaaacggct caacactcga tttatcaatg ttctaaatgt
      661 gtggaaattt ga
//
LOCUS       XM_071832796            1215 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842678), mRNA.
ACCESSION   XM_071832796
VERSION     XM_071832796.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1215
                     /gene="LOC139842678"
                     /note="uncharacterized LOC139842678; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842678"
     CDS             1..1164
                     /gene="LOC139842678"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688897.1"
                     /db_xref="GeneID:139842678"
                     /translation="MEDLEYSGNYQTTTTPFNDDVDSAVSTPYVSAPSSPGRESPHYG
                     GGGGGFFYSAPASPIHHILSSISSSTNLETAGGSFEFELATGPAPSGSMSSADELFLN
                     GQIRPMKLSSHLQHPQDLTPLVDVSEIDGNGESFSRSRDLSSRDRRRRARSLSPLRSN
                     TAFQWLEEFKDGRECTEINEIKEKLEAKDKQRAIENENDNETPSSGASSRSSSVGRSS
                     KRWVFLKEFLYRSKSEGRNSSNSNKNNHKFWSTLSLKKSSDSLTSKTAGALEETGTAT
                     SEVQPPSSKSSTKKSVRSSDSETIGAAEDVPATVKTSAKKAVNGVGVNRKRRGVRSAH
                     EMHYTMNRAQAEEMRKKTYLPYRQGLLGCLGFSSKGYGAMNGFARALNPVSSR"
     misc_feature    286..1065
                     /gene="LOC139842678"
                     /note="Protein of unknown function (DUF1645); Region:
                     DUF1645; pfam07816"
                     /db_xref="CDD:429678"
ORIGIN      
        1 atggaagacc ttgaatatag cggtaactat caaactacta caacaccttt caatgatgat
       61 gtagatagtg ctgtatctac tccttacgtc agcgctccgt ccagtcccgg tcgtgagtca
      121 ccgcattacg gcggaggagg aggaggattc ttttacagtg ctccggctag tccgatacac
      181 cacattttat cctccatttc ttcttctact aatttagaaa ccgctggagg atcgtttgag
      241 ttcgagctag ctaccggacc ggctccgtcc ggatccatgt cctccgccga tgaactcttc
      301 ttaaacggtc agatccggcc gatgaaactc tcgtctcacc ttcaacatcc tcaggatcta
      361 acgccgttag ttgacgtaag cgaaatagac ggaaatggag agagttttag tagatctaga
      421 gatttgagct ctcgagatag acggagaaga gctagatctc tgtctccgtt gagatccaac
      481 acagcgtttc aatggctcga ggaatttaaa gacggaagag aatgtacgga aatcaatgaa
      541 attaaagaga aattagaagc taaagataaa cagagagcaa ttgaaaatga aaatgataac
      601 gaaacgccgt cgtctggtgc atcgtcacgg tcgtcatctg tcggccggag ctccaaacgc
      661 tgggtgtttt tgaaagaatt tttatacaga agcaaaagtg aaggccgtaa tagctcaaat
      721 agcaacaaaa ataatcacaa attctggtct acattgtcat taaaaaaatc atcagattca
      781 cttacttcaa aaaccgccgg tgcattagaa gagaccggta cagcgacatc agaggtgcag
      841 cctccgtcgt ctaaatcgtc aactaagaaa tcagtccgat catctgattc agaaactatc
      901 ggtgcggcag aggatgttcc ggcgacggtt aaaacatcgg cgaaaaaggc ggtgaacgga
      961 gtaggtgtga atcggaaaag gagaggggta cggtcagcgc atgaaatgca ttatacgatg
     1021 aatagagcac aagcggaaga aatgaggaag aagacgtatc tgccgtacag gcaagggtta
     1081 ttaggttgtt tagggtttag ttctaaaggt tatggagcta tgaatggatt tgcaagagct
     1141 ttgaatcccg tttcatcaag gtaatgaaat tgttagttag cttcaagaat gtagtaacaa
     1201 attgataatt ggttg
//
LOCUS       XM_071832797            1504 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides calmodulin-binding protein
            60 B-like (LOC139842679), mRNA.
ACCESSION   XM_071832797
VERSION     XM_071832797.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1504
                     /gene="LOC139842679"
                     /note="calmodulin-binding protein 60 B-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139842679"
     CDS             1..1410
                     /gene="LOC139842679"
                     /codon_start=1
                     /product="calmodulin-binding protein 60 B-like"
                     /protein_id="XP_071688898.1"
                     /db_xref="GeneID:139842679"
                     /translation="MGVKRWFSEEDEDEEEGDRSRPSNQQPNGEGSSKDGRRVMMRLS
                     SQDMAMFEQMIRIPVRQEVERVFENFSGKLPRSPSDACESSSTAPLQLRFLTTPIPTI
                     FTGSRVESEDNVTIKVVLFDPSCNKIVSYGPLASLKIVIVPLDGDFSADDHENWSQSD
                     FDTKIIYAREGKRPLLTGDLVLTLKEGVAVLDNVVFTDNSSWRRSRKFRLGAKAHNQT
                     TGVRIREGKSEAFVVKDQRGEVYKKHHPPFLVDDIWRLEKIAKDGVLHRKLRERKINT
                     LKDFLQVYTTNESSLYALLGGPDNSIWKAIIKHAKSCVLDDKVYLYNCVADAVGILFN
                     SVLEVVGATFDGVTHISMNELDEFQKSMVEGLKQQIYRDLGEMVPIDDLSLVATPVLA
                     ASLRGGFFRSASLGMQDVNIPFPHQDESQMQITSSSSSGLNDSSGQGVSVDYDTFDLQ
                     DGMSYWQPNWTKQSKHGLC"
     misc_feature    268..708
                     /gene="LOC139842679"
                     /note="Calmodulin binding protein-like N-terminal domain;
                     Region: Calmodulin_bind; pfam07887"
                     /db_xref="CDD:462302"
     misc_feature    745..939
                     /gene="LOC139842679"
                     /note="Calmodulin binding protein central domain; Region:
                     Calmod_bind_M; pfam20451"
                     /db_xref="CDD:466600"
     misc_feature    952..1140
                     /gene="LOC139842679"
                     /note="Calmodulin binding protein C-terminal domain;
                     Region: Calmod_bind_C; pfam20452"
                     /db_xref="CDD:466601"
ORIGIN      
        1 atgggagtga aacgatggtt tagtgaggag gacgaggacg aagaggaagg ggatagatca
       61 agaccctcta atcaacaacc aaacggagag ggatcatcta aagacggtag aagggtgatg
      121 atgcggcttt catcccaaga tatggcaatg tttgaacaaa tgattcgaat accggtacga
      181 caagaggtgg agcgtgtatt tgagaatttt tctggcaaat taccaaggtc tccttctgat
      241 gcgtgtgaat caagtagtac ggcgcccttg cagcttcgtt ttctgacaac accgattcct
      301 acaattttta ctggcagtag ggtagaatct gaggataatg taaccatcaa agtagtgtta
      361 tttgatccta gttgtaataa aattgtatca tatggacctt tagcttcact gaagatagtg
      421 attgttcctc ttgatggtga tttttctgct gatgatcatg agaattggtc tcagtccgat
      481 tttgatacta aaatcatata tgcaagagaa ggtaaaaggc cgttgctgac aggtgatttg
      541 gtactaactc tgaaagaagg agttgcagtt ttggataatg tagtatttac ggataattcg
      601 agttggagga ggagtaggaa gtttaggtta ggggcaaagg cccataatca aactactgga
      661 gtgagaatta gagaaggtaa aagcgaagcg tttgtggtaa aagatcaaag aggcgaggta
      721 tacaagaaac atcatcctcc atttttggtt gatgacatat ggcgtttaga aaagatagcg
      781 aaagatggag ttttgcatag gaaattgcgg gaacgcaaaa taaatacgtt gaaagacttt
      841 ctacaagtgt atactaccaa tgagtcgtca ctatacgcgc tgcttggcgg gccggataac
      901 agcatatgga aggcgattat caagcatgcc aaatcttgtg ttttagatga caaggtgtac
      961 ctgtacaact gtgttgcaga tgctgtcggg attttgttca attctgtttt ggaggtcgtc
     1021 ggtgcaactt ttgatggtgt aactcatatc tccatgaatg aacttgatga gtttcagaag
     1081 tctatggttg aaggactaaa gcaacaaatt tacagagatt tgggtgaaat ggtgccaatt
     1141 gatgatcttt ctctggttgc gacccctgtg ttagctgcca gccttcgtgg tggttttttt
     1201 agaagtgcta gtttaggtat gcaggatgtg aatattccat ttccgcatca agatgaatca
     1261 caaatgcaga ttacaagttc atcaagtagc ggattgaatg atagcagtgg acagggagtt
     1321 tctgtagatt atgatacttt tgatcttcag gatggaatgt catattggca accaaattgg
     1381 accaaacaat caaaacatgg actttgttaa actcagattt tagcatttat ctctcaagga
     1441 atggatctcc caaaggaagg tgacgcaaga ttcatgcatg atgccacgat tgagtttcag
     1501 tgta
//
LOCUS       XM_071832798             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842681), mRNA.
ACCESSION   XM_071832798
VERSION     XM_071832798.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139842681"
                     /note="uncharacterized LOC139842681; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:139842681"
     CDS             1..645
                     /gene="LOC139842681"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688899.1"
                     /db_xref="GeneID:139842681"
                     /translation="MRDKIKPHVFIDNSGSNEHVLWVKNDGIKVDFSVNQVWKDLKCN
                     NNVVGWHHVVWFKAFNPKHDIILWMAILGRLNTQDRRDKWKINQQLECSFCGRVKDSV
                     NHLFFNCDFSLKVWKKIKAKLIYRGLSNNLQSIIDDMAQYPYTNNIWNIINRLVIAAC
                     VYFLWHERNLRLFQQKKRSVDEVCEVITKFIRLKLVSLKVKCSGAGAVIKAASI"
     misc_feature    94..345
                     /gene="LOC139842681"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagagaca aaattaagcc tcatgtgttc attgataaca gtggtagtaa tgagcatgtg
       61 ttatgggtca agaatgatgg gattaaggtg gacttttctg ttaatcaggt ttggaaagat
      121 ttaaagtgta ataataatgt tgtggggtgg catcatgtgg tatggtttaa agcatttaac
      181 cctaaacatg atatcatttt atggatggct atcttaggca ggttaaacac tcaagatagg
      241 agggataaat ggaagattaa ccagcagttg gagtgttcat tctgtggtag ggtgaaagac
      301 tctgtcaacc atttattttt taactgtgat ttcagcttga aggtatggaa aaagattaaa
      361 gcaaaattga tatatagagg gttatcgaat aatctgcaga gtattattga tgatatggct
      421 caatatcctt acactaataa tatttggaat atcattaata gattagtgat tgctgcttgt
      481 gtatactttc tctggcatga aaggaatctt aggttattcc agcagaaaaa gaggtctgtt
      541 gatgaggttt gtgaggtgat tacaaagttc attagactca agcttgtttc tttgaaagtt
      601 aaatgttctg gagctggagc tgtgatcaaa gctgctagca tttga
//
LOCUS       XM_071832799            1095 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842682), mRNA.
ACCESSION   XM_071832799
VERSION     XM_071832799.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1095
                     /gene="LOC139842682"
                     /note="uncharacterized LOC139842682; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842682"
     CDS             1..1095
                     /gene="LOC139842682"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688900.1"
                     /db_xref="GeneID:139842682"
                     /translation="MNDFNECLNEIEVDDLGSTWFHFTWTKSLKNPNCGTLKKLDRIL
                     CNEEFVSIFPQANGKFLPFIVSDHSPIVITLPNGLKRKKKSFRFMNHVATKDDFISTV
                     AMGWNEQISGHKMFQVVTKLKHLKKSLNKLTWDNGNVFSKVKDMKKKAAVIALNEYEK
                     AKADELIVLPIDELGVIFTKVLDTAEANAMVSPISDDEIKGALFDIDDNKASRPDGYS
                     ALFFKKAWSVVGQDICDAIKEFFTNGKMLKEINATLIALIPKIDTPNKVSDFRPIACC
                     NVIYKCISKILTNRIKNGLNKLVNVSQSAFIPSRYIIDNILVAQEVLKGYNRSKGIKR
                     CALKIDLQKAYDTVNWDFFQDILVKFGFHD"
     misc_feature    754..>1071
                     /gene="LOC139842682"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgaatgact ttaatgagtg cttaaatgag attgaggtgg atgatttagg gagtacatgg
       61 tttcatttta catggacaaa atctcttaaa aatcctaatt gtggtacttt gaagaaattg
      121 gataggattt tatgtaatga agaatttgtt tccatatttc ctcaagctaa tgggaagttt
      181 cttcctttta tagtttctga tcatagtccc attgtaatta ctctccctaa tggtttgaaa
      241 agaaagaaga aatcattcag atttatgaat catgtggcta ctaaggatga ttttattagt
      301 acagttgcaa tgggctggaa tgaacagatt tctgggcata aaatgtttca agtggtcact
      361 aaactcaagc atctcaagaa aagtctcaat aagttgacct gggataatgg taatgttttt
      421 tctaaagtca aagatatgaa gaagaaggct gctgttatcg cattgaatga atatgaaaag
      481 gctaaagctg atgagttaat tgttttgcct attgatgaat tgggggtcat tttcactaag
      541 gtattagata ctgcagaagc taatgcaatg gtcagtccca tttctgatga tgagattaaa
      601 ggagctttgt ttgatattga tgataataag gcttctaggc ctgatggcta ctcagcttta
      661 ttctttaaga aagcttggag tgtggtaggg caagatatct gtgatgctat taaggagttc
      721 ttcactaatg gtaagatgct gaaagaaata aatgctactt taatagctct tattccaaaa
      781 attgatactc ctaacaaagt atcagatttt aggcctattg catgttgtaa tgttatttac
      841 aaatgcatta gtaagattct tactaatagg attaagaatg gtttgaataa gctggtcaat
      901 gttagtcaat ctgctttcat ccctagtaga tatattatag ataatatctt ggtggctcaa
      961 gaggttttga agggctataa cagatctaaa ggtatcaaaa ggtgtgcctt gaaaattgat
     1021 ttgcagaaag cctatgatac tgtgaactgg gactttttcc aggacatttt agtcaaattt
     1081 ggattccatg attaa
//
LOCUS       XM_071832800            1761 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842683), mRNA.
ACCESSION   XM_071832800
VERSION     XM_071832800.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1761
                     /gene="LOC139842683"
                     /note="uncharacterized LOC139842683; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842683"
     CDS             1..1761
                     /gene="LOC139842683"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688901.1"
                     /db_xref="GeneID:139842683"
                     /translation="MAHNLMDQITHHENPEATTDTKTQGGKRKWNENQGNSSHQKKQD
                     TTKFENANAKKNYNRKKPYCNRCYKHHYGACTIVCDRCKKVGHMSKDCTVNLAQPTGN
                     KPKTCYGCGQVGHMKNQCSNAKKDGNAKGRAFNISAKGARENLDLVTGTFLLNNCIAY
                     VLFDSGADRSFISKDFSTVINVPPTALDTKYIIELANGKTLKVDKIFQGCALTLADKV
                     FEVDLMPVELGSFDVIIGMDWLSKNHANIACTEKSIRIPLANGETLVVQGEKSGAKLN
                     IISCMKARKYLRKGCQAILAHVKAMESEKKRLEDVPVVKDFPGVFPEDLPGLPPHRQV
                     EFQIDLIPGAAPIARPPYRLAPSELQELSNQLQELLDKGFIRPSSSPWGAPILFIQDF
                     SKIARPLTTLTHKGKKFEWLKEQESAFQQLKHKRTTASILSLPEGNEDFVVYCDTSRQ
                     GLGCVLMQRQKVIAYASRQLKLEAVKEEYWKDEAIKGLIKQIEVKGDGTRYFAGRLWV
                     PKYGELRKLVLDEVHKTRYSIHLGTGKMYHDIKEFYWWPNMKADVATYVSQCLTCAKV
                     KVENQKPSGLLQQPKIPQWK"
     misc_feature    <235..>429
                     /gene="LOC139842683"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    385..762
                     /gene="LOC139842683"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(490..492,496..498,502..504,577..585,700..702)
                     /gene="LOC139842683"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    490..498
                     /gene="LOC139842683"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    490..492
                     /gene="LOC139842683"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(577..588,598..609)
                     /gene="LOC139842683"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    1036..>1209
                     /gene="LOC139842683"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1231..>1413
                     /gene="LOC139842683"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH_2; pfam17919"
                     /db_xref="CDD:465567"
     misc_feature    1522..1701
                     /gene="LOC139842683"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atggcacaca acctaatgga tcagatcaca catcatgaaa acccggaagc aacaacagat
       61 acaaaaactc aaggcggtaa gcgtaagtgg aacgagaacc aaggaaatag ttctcaccag
      121 aagaaacaag ataccaccaa gtttgagaat gctaatgcca agaagaatta taatcgcaag
      181 aaaccttatt gtaatcgatg ttataagcat cattatggag cttgtactat tgtttgtgat
      241 aggtgcaaaa aggtggggca tatgtccaaa gattgtacag tcaatctcgc acagccaact
      301 ggaaacaaac ctaaaacttg ttatggatgt ggacaagtgg gacacatgaa gaatcagtgt
      361 tcgaatgcca agaaggatgg aaatgcaaaa ggtagagcat ttaatatctc ggcaaaagga
      421 gctcgtgaaa atcttgattt agtcacgggt acatttcttc taaacaactg cattgcttat
      481 gtactatttg atagtggtgc tgatagaagt tttatttcta aggactttag taccgtaatt
      541 aacgtacctc caactgcttt agatactaag tatatcatag aattggctaa tggcaaaact
      601 ttgaaagtag ataagatctt tcaaggttgt gctctaacgt tagctgataa agtatttgaa
      661 gtcgatctta tgcctgttga gttaggtagt tttgatgtta ttattggtat ggattggtta
      721 tctaagaacc atgcgaacat tgcttgcacg gagaaatcca ttcgtattcc tctcgcgaat
      781 ggtgaaactt tggtagttca aggagaaaag agtggcgcga aactcaacat catttcttgc
      841 atgaaggctc gaaaatattt aagaaaagga tgtcaagcca tcctcgcgca cgtaaaggcg
      901 atggagtcag agaagaagcg acttgaggat gtaccggtag taaaggattt tcctggagtt
      961 tttcctgaag atttacctgg tcttcctcca cataggcaag ttgaatttca aattgactta
     1021 attccgggag ctgcacctat tgctcgacca ccgtatcgat tagcaccttc agaattgcaa
     1081 gagttgtcga accaattaca agaactgttg gataagggat ttattcgacc tagttcatcg
     1141 ccctggggtg ctcctatctt gtttatccaa gatttttcaa agattgcgcg acctttaact
     1201 acactgactc ataaaggaaa gaagtttgaa tggttaaagg aacaagagtc tgcatttcaa
     1261 caattgaagc ataaacgaac tactgcatcc atattatctt tacctgaggg aaatgaagat
     1321 tttgtggttt attgtgacac ctcgcgtcaa ggacttggat gtgttttgat gcagcgacag
     1381 aaggtcattg cttatgcatc acgacagctg aagttagaag ctgtgaagga ggaatattgg
     1441 aaggatgagg cgattaaagg attgattaag caaattgaag taaagggtga tgggacccga
     1501 tactttgcag gacgtctatg ggtaccaaag tatggtgaat taagaaaact tgtgttagat
     1561 gaagtgcaca agacaagata ctcaattcac cttggaactg ggaaaatgta tcacgatatc
     1621 aaggaatttt attggtggcc taacatgaaa gctgacgttg ccacttatgt gagccaatgt
     1681 ctgacttgtg cgaaagtcaa agtggagaat caaaaaccgt cagggttgtt acaacagcca
     1741 aaaatcccac agtggaaatg a
//
LOCUS       XM_071832801             930 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842684), mRNA.
ACCESSION   XM_071832801
VERSION     XM_071832801.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..930
                     /gene="LOC139842684"
                     /note="uncharacterized LOC139842684; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842684"
     CDS             1..930
                     /gene="LOC139842684"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688902.1"
                     /db_xref="GeneID:139842684"
                     /translation="MTKANETFVENVESNIGQKNIDHLVKQYPPLVGYNPVPPLPSQR
                     AHQPPENKVAIYEHAFKHASHHKSWFTFFARQNFTKTPKSNAGSWKETFFFVDQTVVG
                     TGFPQTLIWCEKVEKDVNKMPALDDEEKKLLKQCVNAQLVHRSYGNVMLRLGKISAYW
                     PWEDVRPAIVGPDGKEMRMKKVLTAEEIAGISFRKQDVDKQLEQAAASEHVEETPAES
                     GNKRKAAGTSEAQKKKKMTPKQLEDMRNDNFVASPQTYLPPLMDRHYGNARENYFRGF
                     DLVSGHHHPFFHFASCLWEHRYLRHSAYNRDIL"
ORIGIN      
        1 atgaccaaag ctaatgaaac tttcgtagag aatgtagagt ccaacatagg ccagaaaaac
       61 atcgaccact tagttaagca atacccccct ctagtgggtt acaatccggt accaccactg
      121 cctagccagc gagcccatca gccaccagag aataaggtgg cgatctacga acatgctttt
      181 aagcatgcca gccaccataa atcttggttc accttcttcg cacgccaaaa tttcacaaaa
      241 accccgaaat cgaatgcggg aagttggaaa gaaacttttt tcttcgtcga ccagaccgta
      301 gtaggcactg gcttcccgca gacgctcatt tggtgcgaga aggtagaaaa agatgtgaac
      361 aagatgccag cgttggatga cgaggagaaa aagttgttga agcagtgcgt caacgcacaa
      421 ctggtgcacc gttcgtatgg taatgttatg ctgcggttgg ggaagatctc cgcgtattgg
      481 ccttgggagg atgtgcggcc ggccatagtt ggccccgatg gaaaggagat gaggatgaag
      541 aaggtgctta ccgcggagga gattgctggg atctctttcc gcaagcagga tgtggacaaa
      601 cagctagagc aggcagctgc tagcgaacat gtggaggaaa cgccggcgga gtcaggcaat
      661 aaacgcaagg cggctgggac gtccgaggct cagaagaaga agaagatgac tcctaagcag
      721 ctggaggaca tgcgcaacga caattttgtt gccagtccgc agacctacct ccccccatta
      781 atggaccgcc actatggtaa cgcccgcgag aattatttcc gcggttttga tctcgtgagc
      841 ggtcatcatc atcctttttt tcatttcgcg agctgcttgt gggaacatcg ttatcttcgc
      901 cactccgcat ataatcgtga cattctttaa
//
LOCUS       XM_071832802            1038 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842685), mRNA.
ACCESSION   XM_071832802
VERSION     XM_071832802.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1038
                     /gene="LOC139842685"
                     /note="uncharacterized LOC139842685; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842685"
     CDS             1..1017
                     /gene="LOC139842685"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688903.1"
                     /db_xref="GeneID:139842685"
                     /translation="MTTPIRTPKSTVKSSSPPPSTATMKYDNTSCRRDANCTCHLCLA
                     SIIATRDLIPLLSSQKSSLTTQFSSLKRSPPPTPIFFDNPSAVSTPVSHASRLNVSPI
                     VATNDLNLKIKRKNKEFGYGLILLQCILVLCLILVGKVGILFVGFRFMNTKLSAEIVR
                     NLSDKSLGLGIHGVKERLEILSSELQNLVPEARFTNPNCQIVQDGLILRYRCWLYKSG
                     IEEVSIWGWPLQTTTGLVNTEFDSRSFTILSGRVTEWSNGELNGSIREANTSWEQGKW
                     SESVWRLDENTWILEYKRSFVFENTRSLSSVMEFLNFVMRSTFQWMKQQLWRSFDGNH
                     ITPT"
ORIGIN      
        1 atgacaaccc ccatacgaac acctaaatcc accgtaaaat catcatcacc accaccatcc
       61 acagccacca tgaaatacga caacaccagt tgtcgtagag acgccaactg tacctgccat
      121 ctctgtctcg ctagcatcat tgcaactcgt gatctaatcc cattattaag ttcgcaaaaa
      181 agctcactca ctactcaatt ttcttcttta aaacgatctc cacctccaac tcctattttc
      241 ttcgataacc cttcagctgt ttcaactcca gtatcacacg cttctcgtct caatgtgtcc
      301 cccattgtcg caactaatga tttgaattta aaaattaaga ggaaaaataa agaatttgga
      361 tatgggttga ttttactaca atgtatcttg gttttgtgtt tgatcttggt agggaaagta
      421 gggattttgt ttgtaggttt tagatttatg aatactaaat tgtctgctga aattgttagg
      481 aatttaagtg acaaatcgtt agggttaggg attcatggtg tgaaagaaag attagagatt
      541 ttgagtagtg agctacaaaa tcttgttcca gaagctaggt ttacaaatcc taattgtcaa
      601 atagttcagg atggtttgat attgagatat cgctgttggt tgtataaatc tggaattgaa
      661 gaagtgagta tttggggatg gcctttgcag actactactg gtttggttaa tactgaattt
      721 gattcaagat catttactat tttatctgga agagttaccg agtggtcgaa tggagaatta
      781 aatggttcga ttagagaagc gaatacttca tgggaacaag gaaagtggag tgaatctgta
      841 tggcgtttag atgagaatac ttggattctc gagtataaac gaagctttgt ctttgagaac
      901 acgaggtcat tatcgtcagt aatggagttc ttgaacttcg ttatgaggag cacttttcaa
      961 tggatgaagc agcagttgtg gagatctttt gatggcaatc acataactcc cacataggaa
     1021 gaatcaagtt tactttgc
//
LOCUS       XM_071832803            1153 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides nifU-like protein 2,
            chloroplastic (LOC139842687), mRNA.
ACCESSION   XM_071832803
VERSION     XM_071832803.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 39% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1153
                     /gene="LOC139842687"
                     /note="nifU-like protein 2, chloroplastic; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842687"
     CDS             1..825
                     /gene="LOC139842687"
                     /codon_start=1
                     /product="nifU-like protein 2, chloroplastic"
                     /protein_id="XP_071688904.1"
                     /db_xref="GeneID:139842687"
                     /translation="MWHGNRKRWAYLAIWVFCFSLSPSVIVADSTKMQSGAVILSQSS
                     SSYYINSPRVTVDSSSTSCSSINPYPKLINDLFAQISSGFFGTPISIARSSLCSSKTR
                     FTRRNVVKAVATPESAVELPLTAENIESVLDEIRPYLIADGGNVALHEIDGNVVRLKL
                     QGACGSCPSSVTTMKLGIERRLMEKIPEIVAVEPIPDEETGLEMNDENIEKVLEEIRP
                     YLVGAAGGSLEFVCIEEPIVKVRLTGPAASVMTVRVAVTQKLREKIPAIAAVQLLQ"
     misc_feature    <325..582
                     /gene="LOC139842687"
                     /note="Fe-S cluster biogenesis protein NfuA,
                     4Fe-4S-binding domain [Posttranslational modification,
                     protein turnover, chaperones]; Region: NifU; COG0694"
                     /db_xref="CDD:440458"
     misc_feature    625..813
                     /gene="LOC139842687"
                     /note="NifU-like domain; Region: NifU; pfam01106"
                     /db_xref="CDD:460066"
ORIGIN      
        1 atgtggcacg gaaatcgtaa gaggtgggct tatttggcca tttgggtctt ttgtttctct
       61 ttatccccga gtgttattgt tgctgattca acgaagatgc aaagtggtgc agtgattttg
      121 agtcaatcat cttcatctta ttacatcaat tcacctcgag taaccgttga ttcatcttca
      181 acttcatgct catcgatcaa tccttaccct aagttaatta acgatttatt tgctcagata
      241 tcatctggat tcttcggcac tccaatttct atagctagga gcagcttatg ttcatcgaaa
      301 acgagattca cgcgccgcaa cgttgtaaag gcggttgcaa ctccagaatc agcagtagaa
      361 ttgcctctaa ctgcagaaaa cattgagagt gtattggacg aaattagacc ttatctcatt
      421 gcagacggtg gcaacgtagc attacatgag attgatggaa acgttgtacg gttgaagcta
      481 caaggagcct gtggttcgtg tccaagctct gtgactacta tgaaattggg gattgaacgg
      541 cgtttgatgg agaagattcc ggaaattgtt gctgttgaac cgatacctga tgaagaaacc
      601 ggtcttgaaa tgaatgatga aaatatagag aaggttcttg aagaaatacg gccatatctt
      661 gttggtgcag caggtggatc actagaattt gtgtgcatag aagagccaat cgtaaaagta
      721 cgattaacag gccctgcagc aagcgtaatg actgttagag ttgctgtaac tcagaaatta
      781 cgtgaaaaga tccccgccat tgcagcagtt caacttttgc agtaaattta aacccgcatt
      841 ctcatcctaa gccataaatg aaacttgcat aacatatagc acgaacaaag gtcacaagag
      901 ggaactcctg tacagtttca tttgttccat gtttgtcaca gtaattaaaa tgtttgttga
      961 aacaaatcta atagtggcta ccgtgtaaaa ctattaatac cactggtgta tttcaatgtg
     1021 cttctggtgc ttcgaagcaa atggttgttt ggtactcgat gaccagtgat ataaattttg
     1081 tcattacatt acatattcta ctattttggg ttgtgcatac aatcattgtc gactggtcaa
     1141 cgtaatgaac ata
//
LOCUS       XM_071832804             660 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842688), mRNA.
ACCESSION   XM_071832804
VERSION     XM_071832804.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..660
                     /gene="LOC139842688"
                     /note="uncharacterized LOC139842688; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842688"
     CDS             1..660
                     /gene="LOC139842688"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688905.1"
                     /db_xref="GeneID:139842688"
                     /translation="MDFVTKLPTSQKGNDMIWVIFDQLTKSAQFLATKETDWLSILAE
                     LYIKEIVSRHGIPLSIISDRDSRFVSNFWNSLQKSLGTMKPVRNSLQIRNYSDNSRKG
                     SDSMQKVESVTFGKRGKLAPRYIGSFKIIRRVNDQTVVLELPAELAGIHDTFNVCYLR
                     KCKVDDETQLVPLSDLRVDLNKKLVEKSVRIVDRKFLSVAGRCLIVGAIERMKLTRWS
                     D"
ORIGIN      
        1 atggattttg taaccaaatt acctacatct cagaaaggta atgatatgat atgggtaatt
       61 tttgatcaat tgacgaagag tgcacaattt ttagcaacaa aagagacaga ctggctgagt
      121 attttggcag agttgtacat aaaagaaata gttagtcgac atgggattcc gttatctatc
      181 atatctgacc gggattctag atttgtgtct aacttctgga acagtttaca gaaaagtttg
      241 ggaacgatga agccggtgag aaacagtttg cagatccgga attattcaga taacagccga
      301 aaaggtagcg atagcatgca aaaagttgaa agcgtcacgt ttggtaagcg tggtaagtta
      361 gctccgagat acattgggtc attcaagatt attcgaagag ttaatgacca aactgttgtg
      421 ttagagcttc cagcagagtt ggcagggata cacgacacat ttaatgtatg ttatcttaga
      481 aagtgtaagg ttgatgatga gacgcaactg gttccgttaa gcgatttgag ggttgacttg
      541 aataaaaaat tagttgaaaa atcggtgaga attgtagata gaaagttttt gtcagttgca
      601 ggaagatgct taattgttgg agccattgag aggatgaaat taacaagatg gtcagattaa
//
LOCUS       XM_071832806             756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides multiple organellar RNA
            editing factor 1, mitochondrial-like (LOC139842690), mRNA.
ACCESSION   XM_071832806
VERSION     XM_071832806.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 12% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-39                JBITNF010000004.1  550409824-550409862 c
            40-386              JBITNF010000004.1  550409476-550409822 c
            387-495             JBITNF010000004.1  550393445-550393553 c
            496-550             JBITNF010000004.1  550393301-550393355 c
            551-756             JBITNF010000004.1  550392998-550393203 c
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..756
                     /gene="LOC139842690"
                     /note="multiple organellar RNA editing factor 1,
                     mitochondrial-like; The sequence of the model RefSeq
                     transcript was modified relative to its source genomic
                     sequence to represent the inferred CDS: deleted 1 base in
                     1 codon; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842690"
     CDS             1..756
                     /gene="LOC139842690"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: multiple organellar RNA
                     editing factor 1, mitochondrial-like"
                     /protein_id="XP_071688907.1"
                     /db_xref="GeneID:139842690"
                     /translation="MAANVLRLRRSLAALTSSILNHSRFFTSAVETVSSPTPVKQNYS
                     LFEHTQSKSNSCILFKFLPSRSISSRARYSYDDMDGDHISPDAILFEGCDYKHWLITM
                     DFLKDPKPSPEEMVETYVQTAAKVLGSVEEAKKKIYACSTTTYNRFQIEVSEEVSEQF
                     KGMLLFLFVLPDSYIDPVNKDYRGDKYINGTIIPRPLPVQYGRHSGRYNDRNRDYNRP
                     PRVYQGNYNQAEGKSNNHARETGGGGYGKGTGG"
ORIGIN      
        1 atggcggcga acgttcttcg tctccggaga tcacttgcag cactcacaag ctccatcctc
       61 aatcactcac gattttttac ttccgctgta gaaaccgtat cttcaccaac tcccgttaaa
      121 caaaactata gcttatttga acacactcaa tcaaaatcta acagttgcat tttattcaaa
      181 ttcttacctt caaggtccat ttcttcgaga gctagataca gttatgatga tatggatggt
      241 gatcatatca gtccggatgc tatactattt gagggctgcg attacaagca ttggttgatt
      301 accatggatt ttcttaaaga tcctaaacct tcaccggaag aaatggtgga aacttatgtt
      361 caaactgctg ccaaagtgct tggaagtgtg gaagaggcga agaagaaaat ttatgcttgt
      421 agcacaacca cttacaatag gtttcagatt gaggtgtcag aggaagtttc ggagcagttt
      481 aaaggtatgc ttcttttttt atttgtgtta cctgattcct atattgatcc cgttaacaaa
      541 gactatagag gagacaagta tattaatgga actatcatac ctagaccact tcccgtgcaa
      601 tatggaagac atagtggaag gtataatgat cggaatagag attacaacag accacctcga
      661 gtttatcaag gaaattataa tcaagctgaa gggaaaagta ataaccatgc tagagaaaca
      721 gggggtggtg gttatgggaa aggcaccggt ggctaa
//
LOCUS       XM_071832807             651 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842691), mRNA.
ACCESSION   XM_071832807
VERSION     XM_071832807.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..651
                     /gene="LOC139842691"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842691"
     CDS             1..651
                     /gene="LOC139842691"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071688908.1"
                     /db_xref="GeneID:139842691"
                     /translation="MATCHPCRTPVEPGAKLTTHGPPVKDPTLYRSLAGALQYLTFTR
                     PDITYAVQQICLFMHDPREQHLHALKRILRYIQGTTDLGLQLYASSPTTLVAYSDADW
                     AGCPTTDALHLVIVCFLETTCYHGRLNDNSHLLDLVLRPSTVVWPTPLQRHAGYGQVR
                     VLHVPSRYQFADIFTKGLPYALFDDFRSSLSVRSTPAPTAGDVRLDIYMDPCNVSG"
     misc_feature    <469..537
                     /gene="LOC139842691"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atggccacat gtcacccatg taggaccccg gtcgaaccag gggctaaact cactactcac
       61 ggtcctcccg tgaaggaccc gactttatac cgcagccttg caggtgcatt acagtatctg
      121 accttcactc ggcctgacat cacttatgct gttcaacaga tttgtctctt catgcacgat
      181 ccacgagagc aacaccttca cgctctcaag cggatcttac gatatattca gggtactaca
      241 gatcttggtt tacagttgta cgcatcatca cccaccactt tggttgccta ctctgacgct
      301 gattgggctg gctgccccac cacagacgct ctacatctag ttattgtgtg tttcttggaa
      361 acaacttgct atcatggtcg tctaaacgac aactcacacc ttctcgatct agtgctgagg
      421 ccgagtaccg tggtgtggcc aaccccgttg cagagacatg ctggatacgg acaggtccgt
      481 gttctacatg tgccttcgag atatcagttt gcggacatct tcactaaagg tctcccgtat
      541 gcattgtttg atgacttccg atctagtttg agcgtccgca gcactcccgc tccaactgcg
      601 ggggatgtta gactagatat ttatatggac ccttgcaatg ttagtggtta g
//
LOCUS       XM_071832808             540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842692), mRNA.
ACCESSION   XM_071832808
VERSION     XM_071832808.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..540
                     /gene="LOC139842692"
                     /note="uncharacterized LOC139842692; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842692"
     CDS             1..540
                     /gene="LOC139842692"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688909.1"
                     /db_xref="GeneID:139842692"
                     /translation="MEKKFPSNNSNLVTMKNNLVPKKVEVFVWRAKRERLPVLSELDK
                     RGIDLHSVLCPLCGMEIESVKHSLLSCVHVREIWEKVPDWWGFDSINLSFDNLLCGCG
                     PSNCSDLGREIWQAVEWISGYLLWRNRNQKVFKKLSWTAPNALSEIQVLSFDWVVKRC
                     KQRKVEWHDWLHNPSVYLV"
     misc_feature    <49..231
                     /gene="LOC139842692"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggagaaaa agtttccttc aaataattca aatttggtga ctatgaagaa taatcttgtt
       61 ccaaaaaaag ttgaggtatt cgtttggaga gcgaagcggg agagattacc cgttttgtcc
      121 gaactagaca aacggggtat cgatctacac tccgttcttt gccctctttg tggtatggaa
      181 attgaatcgg tgaagcattc tcttttgtcg tgtgtgcatg ttcgtgaaat ttgggaaaaa
      241 gtacctgatt ggtggggttt tgattcgatt aatctatctt ttgataatct cctatgtggt
      301 tgtggtcctt ctaattgctc cgatttgggt agagaaatat ggcaagcggt cgaatggatt
      361 agtggctatc ttctttggag gaataggaac caaaaagttt tcaagaaact ttcatggacc
      421 gccccgaatg cactaagtga gattcaagtc ttgagctttg attgggttgt gaagcgttgc
      481 aagcaaagga aagtcgaatg gcacgattgg cttcataatc ctagtgttta ccttgtttaa
//
LOCUS       XM_071832809             450 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842693), mRNA.
ACCESSION   XM_071832809
VERSION     XM_071832809.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..450
                     /gene="LOC139842693"
                     /note="uncharacterized LOC139842693; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842693"
     CDS             1..450
                     /gene="LOC139842693"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688910.1"
                     /db_xref="GeneID:139842693"
                     /translation="MEDLISQFTILSDQSLYDKNFDPSTIEQLMRLFEIEAYNSWAAM
                     ELQFDNEVTEAENSMKEAEDYLDSAMEDAMEEFRKFEEEMERESSKELNGLLSISESA
                     RRLGKSMEKAASYASHKYVEAALNSATASMRSAMKTVASKGKKVHPS"
ORIGIN      
        1 atggaagatt taatctctca attcacaatt ctatccgatc aatctctcta tgacaaaaac
       61 ttcgatccat caacgatcga acaattaatg cgtctcttcg agatcgaagc ctacaattca
      121 tgggcagcaa tggagctcca attcgacaac gaagtcacag aagctgagaa ttcaatgaaa
      181 gaagccgagg attacctcga ttcggctatg gaagacgcga tggaagaatt cagaaaattc
      241 gaagaggaaa tggaacgcga atcgagtaaa gagttaaacg gattgttgtc gatctcagaa
      301 agtgcgagaa ggttaggtaa atcgatggag aaagctgcga gttatgcgtc gcataagtac
      361 gttgaagctg cgttgaattc agctactgct tcgatgagat cggctatgaa aacggttgct
      421 tccaagggaa agaaagttca tccgtcttaa
//
LOCUS       XM_071832810             768 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842694), mRNA.
ACCESSION   XM_071832810
VERSION     XM_071832810.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..768
                     /gene="LOC139842694"
                     /note="uncharacterized LOC139842694; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842694"
     CDS             1..768
                     /gene="LOC139842694"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688911.1"
                     /db_xref="GeneID:139842694"
                     /translation="MEAKVSDRVVWGDSGCVFNWEWSRDPMGRTKSELDDLITLISSY
                     THSSEASDSWRWSFSSNGKFTTKQLNSIIMDKTLAGDRSLPETKRNMLIPKKIEIFIW
                     RACKKRLPSLMELDKRGVDLHTVRCPMCDDDVESIDHALIFCKNAFEVWTIVYKWWGL
                     GCFSKTSIVEAFDGSVAQGCSETGGLIWQAVEWSCGYLLWKSRNLKIFKSKVCCVPSI
                     VNEIHILSFDWISRRLKHPKIDWCTWLSNPNSYLAIT"
     misc_feature    <277..450
                     /gene="LOC139842694"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaggcaa aggtatctga tcgagtggtt tggggagata gtggttgcgt tttcaattgg
       61 gagtggtcca gggatccaat gggcagaacg aagagtgagc tagatgattt aatcaccttg
      121 atcagctcgt atacccatag cagcgaagca tctgattcat ggagatggtc tttctcatct
      181 aatggtaaat tcacaaccaa acaattgaat agtatcataa tggataaaac attagcaggt
      241 gatcgaagtc ttcccgaaac caaacgaaat atgttgatcc caaaaaagat tgagatattt
      301 atttggagag catgtaaaaa aaggttgccg tcattaatgg aacttgataa gagaggggtc
      361 gaccttcata cggtaaggtg cccaatgtgt gatgatgatg ttgagagtat tgatcatgcc
      421 ttgatttttt gtaaaaacgc ttttgaggta tggacaatag tttacaaatg gtggggttta
      481 ggttgttttt caaaaactag tatcgtggaa gcttttgatg ggtcagttgc tcaaggatgc
      541 tcggaaaccg ggggtctaat ttggcaagcg gtcgagtggt cgtgcgggta tcttttgtgg
      601 aaaagtcgga acttgaagat tttcaaaagt aaagtgtgtt gtgttccatc gatagtaaat
      661 gaaatacata tcttgagttt tgattggatc tctagaagat taaagcaccc gaagatcgat
      721 tggtgcacat ggttatcgaa tccgaatagt tacttggcga ttacatag
//
LOCUS       XM_071832811             933 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box/LRR-repeat
            protein 9 (LOC139842695), mRNA.
ACCESSION   XM_071832811
VERSION     XM_071832811.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..933
                     /gene="LOC139842695"
                     /note="putative F-box/LRR-repeat protein 9; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 Proteins"
                     /db_xref="GeneID:139842695"
     CDS             1..933
                     /gene="LOC139842695"
                     /codon_start=1
                     /product="putative F-box/LRR-repeat protein 9"
                     /protein_id="XP_071688912.1"
                     /db_xref="GeneID:139842695"
                     /translation="MGEKFLPVATNTKVTNASASILNPTANWVELPADLTGNILQRIG
                     MFDILQNAQKVCTTWRKICKDPAMWRVIYMDNSSGTRSRLLCQEICKLAVDRSQGQLV
                     DLSITHLVTHSLLQYISDRSSQLKRLEVIYNHGDLHGKWGAYLKKFPLLEELSLEKAH
                     IEPKDIEDAGRYCPMLKTLKLNRMHEVDSGKSYDDVQLRLSEMAITIGKSLHNLRHLE
                     LVQDSISNIGLQAILDGCYRLESLDICQCPFIDLKKDDIGKTCSEQIEDLKLPGDDAA
                     YRYYGDLSYDDFIVVDEDGYPIGDLSDMMAPFSV"
     misc_feature    79..219
                     /gene="LOC139842695"
                     /note="F-box domain found in Arabidopsis thaliana
                     SKP1-interacting partner 19 (AtSKIP19) and similar
                     proteins; Region: F-box_AtSKIP19-like; cd22164"
                     /db_xref="CDD:438935"
     misc_feature    order(91..93,103..105,112..117,124..129,139..141,145..150,
                     163..171,175..177)
                     /gene="LOC139842695"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438935"
     misc_feature    298..372
                     /gene="LOC139842695"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    373..450
                     /gene="LOC139842695"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    451..525
                     /gene="LOC139842695"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    526..639
                     /gene="LOC139842695"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    640..714
                     /gene="LOC139842695"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
     misc_feature    715..792
                     /gene="LOC139842695"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275381"
ORIGIN      
        1 atgggcgaaa agtttttacc cgtggctact aatactaaag taacaaacgc atcggcgtca
       61 attttaaatc caactgcaaa ctgggtagag ctcccagccg atttaacagg caatatactc
      121 caaagaattg gtatgtttga tatacttcaa aatgcgcaga aagtgtgtac cacttggcga
      181 aaaatctgca aggaccctgc tatgtggagg gttatttata tggacaattc ttcaggtacg
      241 agaagtcggc tattatgtca agagatatgt aagcttgctg tcgatagaag ccaaggccaa
      301 ttggttgatc tctctatcac ccatcttgtc acccattcac ttcttcaata tatctctgac
      361 agatctagtc agcttaaacg tctagaagtc atatataatc atggtgatct acatggaaag
      421 tggggtgcat atctgaagaa atttccttta ctggaggaac tcagcctcga gaaagcacat
      481 attgagccaa aagacatcga agatgctgga cggtattgcc ccatgttaaa aaccctcaaa
      541 ttgaatcgaa tgcacgaggt agattctggt aaatcatatg atgatgttca gcttaggcta
      601 agcgagatgg ccataactat cgggaaaagt ttacataatt taaggcacct cgaactcgtt
      661 caagacagca tatcgaatat cgggttgcag gcgattctgg atggttgtta tcgcctcgag
      721 tctcttgaca tatgccagtg ccccttcatt gatctaaaaa aagacgacat tgggaaaaca
      781 tgttcagaac agattgaaga tctaaaactt cctggtgatg atgctgctta cagatactat
      841 ggggacttgt cgtatgatga tttcattgtt gttgatgaag atggctatcc gattggggac
      901 ttgagtgaca tgatggctcc attttctgtt tga
//
LOCUS       XM_071832812             921 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842696), mRNA.
ACCESSION   XM_071832812
VERSION     XM_071832812.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..921
                     /gene="LOC139842696"
                     /note="uncharacterized LOC139842696; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842696"
     CDS             1..921
                     /gene="LOC139842696"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688913.1"
                     /db_xref="GeneID:139842696"
                     /translation="MQNAYKMFDFIIDDSDDEKVVNFVKSLTEEEVEGEASSSRVPRT
                     RIYIPRDREDAAVRERPDAVGLQSLTILQKCTAAIRQMTYGTTPDLFDEYIKIGEKTA
                     ALCLDNFVDAYFICASNDINVLNYSPLFNTIKEGTAPPSLLNVNGHHYEIGYYLCDGI
                     YPDWAMLVKAPHNPIDEPRKKFKRFQESTRKDIERAFGVLQGRFAMLKTPARSMDFNK
                     IRRHMYACVVLHNMIQENKGCVISKRHEKMIAAPSNRPIRLERDFRDRDVRVTEIRDR
                     QVHNRLESDLTEHIWNLSPYFRATNINIDD"
     misc_feature    <334..714
                     /gene="LOC139842696"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcaaaatg catacaaaat gttcgatttt atcattgatg attccgatga tgaaaaggtg
       61 gttaattttg ttaagagttt aacggaagaa gaagtggagg gagaagcgag tagttcacga
      121 gtccctcgaa cacggattta tattccaagg gatcgtgaag atgcggctgt gagggaacgt
      181 ccagatgcag ttggtcttca aagtttgacg atcctacaaa agtgcaccgc ggccatacgt
      241 caaatgacgt atggaactac accagatctg tttgacgaat acataaaaat tggcgagaaa
      301 acggctgctt tatgtttaga taattttgta gatgcgtatt tcatttgtgc aagcaacgat
      361 attaacgttt taaattattc accgttgttt aacactataa aagagggcac tgctccacct
      421 tcactgttaa atgtaaacgg ccatcactac gagatagggt attacctatg tgatggtata
      481 tacccagatt gggctatgtt ggtcaaagcg ccccacaatc caattgacga accgcgtaaa
      541 aagtttaaac ggtttcaaga aagtacaagg aaagatattg aacgtgcctt cggagtacta
      601 caaggtagat ttgcaatgtt aaagactccg gcaagatcta tggatttcaa caaaattaga
      661 agacatatgt acgcttgtgt tgtattacat aacatgattc aagaaaataa aggatgtgtg
      721 atttcaaaaa gacatgaaaa aatgattgct gcaccaagta accgacctat tcggttagaa
      781 agggatttta gggatcgaga tgtcagggtt acggaaatca gagataggca agttcacaat
      841 cggctggagt cagatttaac tgagcacata tggaatttat caccttattt tcgtgctact
      901 aatattaata ttgatgatta a
//
LOCUS       XM_071832813             972 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842698), mRNA.
ACCESSION   XM_071832813
VERSION     XM_071832813.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..972
                     /gene="LOC139842698"
                     /note="uncharacterized LOC139842698; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842698"
     CDS             1..972
                     /gene="LOC139842698"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688914.1"
                     /db_xref="GeneID:139842698"
                     /translation="MVRSRSSAWNGIRKSDRCIDELQIQFSNSFVKTVNAEDSSRFWK
                     DVWLGDRSFQYRFPRLFRLEVNAEVLVMDRLIRTSGSNDWVPNWAWSRTPSRRTEAEF
                     IDLQKLIEDFKYSDAAKDGWQWNLNPSGSFYTFVLSSLINQKLLPVTPASNPTVRNNM
                     VPQKLAIFIWRAKLNRLPVLSELYKRGIDLDPLLCPFCNNEVETLKHALCDCAIAKDV
                     WSRVSRWWNTNYINFPCLSDRFTGSIPSNGLTSTSKLWQAVEWVTGYCLWVHRNNVIF
                     RKKKSTGPMLLNNIQLKSFEWISKRSRKHSLIWSQWLLNPKSFDLQG"
     misc_feature    <472..654
                     /gene="LOC139842698"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggttcgaa gcaggtcctc cgcttggaat gggatacgaa aatctgatcg atgcattgac
       61 gaattacaaa ttcagttttc caattctttt gtaaaaacag ttaatgcaga agactcatct
      121 cggttttgga aagacgtttg gttaggtgat cgatcttttc aatatagatt tcctcggtta
      181 ttccgtctag aagttaacgc tgaagtcttg gttatggatc gtctcatccg cacaagtggg
      241 tcaaatgatt gggtcccgaa ttgggcctgg tctagaactc cttctcgacg aacagaagct
      301 gaattcattg atctacaaaa attaattgaa gacttcaaat actctgatgc tgctaaagat
      361 ggttggcaat ggaatcttaa cccctcaggt agcttctaca cttttgtttt atcatcttta
      421 atcaatcaaa agttgctacc cgttactcct gcctcgaatc ccactgtgcg caacaatatg
      481 gttccccaaa aacttgcgat ttttatttgg cgtgcgaagt tgaatcgtct tccggtttta
      541 tcagagcttt ataagagggg tatagatctc gatcctttgt tatgtccgtt ttgtaataat
      601 gaagttgaaa ctttgaaaca cgccttatgt gattgtgcga ttgctaaaga tgtgtggtct
      661 agagtttctc gatggtggaa taccaattat atcaactttc cctgtttaag cgatagattt
      721 acgggttcca ttcctagtaa tggtttaact tctacatcaa agttatggca agccgttgag
      781 tgggtcaccg gatattgtct atgggttcat cgtaacaatg ttatttttag aaagaaaaag
      841 tctaccggtc caatgctgct caataatatc caattgaaat ctttcgagtg gatctccaaa
      901 cgttcccgga agcatagtct catatggtct caatggcttt taaacccgaa gtctttcgat
      961 ctccaaggat ag
//
LOCUS       XM_071832814             792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842699), mRNA.
ACCESSION   XM_071832814
VERSION     XM_071832814.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..792
                     /gene="LOC139842699"
                     /note="uncharacterized LOC139842699; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842699"
     CDS             1..792
                     /gene="LOC139842699"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688915.1"
                     /db_xref="GeneID:139842699"
                     /translation="MYNFGVISAYDAEWVLCGDFNEVRDQSERKNCDFIERRAKWFNE
                     FIHKTRLIDVPLGGKKFTRICDNGLKFSKLDRFLVSEIFHNSWGDISALALERKLSDH
                     CPIVLRDREIDYGPKPTKIFNDWLVGEESKKVVEEEWNLNVGGNRYDCVFRNKLKNVK
                     LALKEWSRSTFGNIDNEIQELKKKACDWESYAENRVLSDVERRSWLETRKQWLEKDRI
                     KANMDRQKSRVKWIQDRDENSKYFHSVFKRKNLKRNIRGLNINRS"
     misc_feature    <43..321
                     /gene="LOC139842699"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgtataatt ttggcgttat cagcgcatat gacgcggaat gggtactttg tggcgatttt
       61 aatgaggttc gtgatcaaag tgaaaggaaa aattgtgact ttatcgaaag gcgggctaaa
      121 tggttcaatg aatttataca taagacacga ctcatcgatg ttccattagg tggcaagaag
      181 ttcacgcgaa tttgtgataa tgggttgaag tttagcaagt tggatagatt cctcgtctcc
      241 gaaatctttc ataattcttg gggggacatc tcggctctag ctcttgaaag gaagttatcg
      301 gatcactgtc ccatagtcct aagagataga gaaattgatt atggaccaaa gccaacaaag
      361 atattcaatg attggttagt aggcgaggaa tctaaaaaag tggtggagga agagtggaat
      421 cttaacgttg gtggaaatag gtatgattgc gtattccgta acaaacttaa gaatgtcaaa
      481 cttgccttga aagaatggag tagatctact ttcggtaaca ttgataacga gattcaagaa
      541 ctcaaaaaga aagcttgtga ttgggagtcg tatgcggaga atcgtgttct aagtgatgtg
      601 gagaggcgaa gttggttaga aactaggaag caatggttgg agaaggatag gattaaggca
      661 aacatggata ggcaaaaatc tcgagtcaaa tggatccaag acagagatga aaactccaaa
      721 tatttccatt cggtcttcaa aagaaaaaat ttgaaaagaa atatcagggg tttaaacata
      781 aataggagtt ag
//
LOCUS       XM_071832815            1851 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heat shock cognate 70 kDa
            protein-like (LOC139842701), mRNA.
ACCESSION   XM_071832815
VERSION     XM_071832815.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1851
                     /gene="LOC139842701"
                     /note="heat shock cognate 70 kDa protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins"
                     /db_xref="GeneID:139842701"
     CDS             1..1851
                     /gene="LOC139842701"
                     /codon_start=1
                     /product="heat shock cognate 70 kDa protein-like"
                     /protein_id="XP_071688916.1"
                     /db_xref="GeneID:139842701"
                     /translation="MAEGSGNGDVLAIGIDLGTTYSCVGALKDGRIEIIPNEQGNRTT
                     PSCVAFTDSERFIGDGAKNQALVNSANTIFDAKRLIGRSFSDPQVQDDIKLWPFKVTG
                     GLGDTPTIVVSYKGQKKEFLVEEISSMILAKMKESAETYLGDVVKNAVVTVPAYFNDS
                     QRQATKDAGNIAGLNVVRMINEPTAAAIAYGLNYKTSIRSKINALVFDLGGGTFDVSV
                     MTIEKGDIFEVKGVAGDSHLGGEDFDHRMVEHCVEEFKRKFKLDLNENKRALGRLRFA
                     CEKAKRILSSTTQTTIKLDCLHDGIDFSMKFTRAKFEELNSSFFEKCIKTVENCLNDA
                     GIKKSCVDEIILVGGSTRIPKVQQMLQEFFDGKQLCKSVNPDEAVAYGAAVLAANLSG
                     TSNKSVQDVVLSDVTPLSLGIELYRDKFSVVIPKNTPIPTSKAQTYVTAIDELTLVDV
                     KVYHGERCRATDNHFLGKFTVDGLPCLPKGEAEVLVCFEIDANGILTVTGGVVATGKV
                     AKITIDNEKRRLSKDEIERMLKEAERYKFEDAEFKKKADARYELEDYVYNMRKKINEK
                     NGKNLSDEKLKEMENAIVDTSKWLEDNQDAPFAELQVKKIRLEFVCKLQI"
     misc_feature    34..1836
                     /gene="LOC139842701"
                     /note="heat shock 70 kDa protein; Provisional; Region:
                     PTZ00009"
                     /db_xref="CDD:240227"
ORIGIN      
        1 atggcggaag gaagtggaaa cggcgacgtt ttggcgattg ggattgatct cggaacaacg
       61 tattcatgtg ttggtgcatt gaaagatggt cgtattgaga tcatacctaa tgaacaaggc
      121 aacagaacga caccgtcatg tgttgctttc actgattctg aacgatttat tggtgatggt
      181 gccaaaaatc aagcacttgt taactcggct aacaccatat ttgatgcaaa gaggttgatt
      241 ggaaggagtt tcagtgatcc acaagtgcaa gatgacataa agttatggcc ttttaaggtt
      301 acaggtggtc ttggcgacac accaactatt gttgtctcat acaaaggaca aaaaaaggaa
      361 tttttggttg aagaaatttc gtcaatgatt cttgctaaga tgaaagaaag cgctgaaacg
      421 tatcttggag atgttgtgaa gaatgccgtt gtaaccgtcc ctgcttattt caatgattca
      481 caacgtcaag ctacaaaaga tgcaggcaat attgctggct taaacgttgt tcgtatgatc
      541 aacgagccta ctgcagctgc aattgcatat ggtctgaatt acaagacatc tattcgtagc
      601 aagataaacg cgctcgtttt cgatttgggt ggtggtactt tcgatgtctc tgtaatgact
      661 attgagaaag gtgatatttt tgaggtgaaa ggtgtcgcgg gtgacagtca tttaggaggt
      721 gaggattttg atcatcgaat ggtggaacat tgtgttgaag aatttaaaag gaaatttaaa
      781 ttggatttaa acgagaataa aagagcgttg ggtcggttga gatttgcttg cgagaaagct
      841 aaaaggattc tttcgtctac tactcaaacg acaatcaaat tggattgttt gcacgatgga
      901 atagattttt ctatgaaatt tactcgagct aaatttgaag agctgaatag tagcttcttt
      961 gaaaagtgca ttaagactgt tgagaattgt ttaaacgatg cagggattaa gaagtcgtgt
     1021 gtagatgaga taattctcgt tggtgggtcc actaggatac cgaaggtaca acaaatgttg
     1081 caggagtttt ttgatggtaa gcagctatgc aaaagtgtga accctgatga agctgttgca
     1141 tatggtgcag ctgttttggc tgcaaacttg agtggtacga gtaacaagag tgttcaagat
     1201 gtggtgttat ccgatgtaac tcctttgtct cttggtatag aattatacag agataaattc
     1261 agtgttgtga ttccgaaaaa cacccctatt cctacaagta aggctcaaac ttacgtgaca
     1321 gctattgacg aactaacttt ggtggatgtc aaagtatatc acggcgaaag atgtagagct
     1381 actgataacc actttttggg taagttcacc gttgatggac taccgtgtct acctaaagga
     1441 gaagctgaag tattggtatg ctttgaaata gatgctaacg gtatccttac tgttactggt
     1501 ggggtagtag ctacaggtaa ggtagcgaaa attacaatcg acaatgaaaa gagaagactt
     1561 tcgaaggacg agattgagag gatgttaaaa gaggctgagc ggtataaatt tgaggatgct
     1621 gaatttaaga agaaagcaga tgctcgttac gagttggaag attatgtgta caacatgagg
     1681 aagaagatta atgagaagaa tggtaagaat ttgtctgatg agaagttgaa ggaaatggag
     1741 aacgccattg ttgatacatc caagtggctt gaggataacc aagatgcacc ttttgctgag
     1801 cttcaagtta agaagattcg ccttgagttt gtttgcaaac tacagattta g
//
LOCUS       XM_071832816            2493 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides heat shock cognate 70 kDa
            protein-like (LOC139842702), mRNA.
ACCESSION   XM_071832816
VERSION     XM_071832816.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2493
                     /gene="LOC139842702"
                     /note="heat shock cognate 70 kDa protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139842702"
     CDS             1..2493
                     /gene="LOC139842702"
                     /codon_start=1
                     /product="heat shock cognate 70 kDa protein-like"
                     /protein_id="XP_071688917.1"
                     /db_xref="GeneID:139842702"
                     /translation="MSHQTRGANTLPNFTLTPAQFQQLLAAAQGNNNQENNQGNLPTS
                     CTYKEFMNCKPPSFNGNEEEVELTRWFEKVESIFRICSSQGSNKKAADSSRSSYAGIK
                     PQCSRYDKHHLGKCMAQCTKCKKVGHIAKYCRTSATPATKSNAFVPTCYGCGEVGHFR
                     NQCPKNKGNNGNAKSCAFVITAEEAREDDEVITDYVTFKTEKKKYNPKRIDLRVMAEG
                     SGSGDVLAIGIDLGTTYSCVGALKDGRIEIIPNEQGNRTTPSCVAFTDSQRFVGDGAK
                     NQALVNSANTIFDAKRLIGRSFSDAQVQEDIKLWPFKVTGGLGDTPTIVVSYKGQKKE
                     FLVEEISSMILAKMKESAETYIGDVVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVR
                     MINEPTAAAIAYGLNNKTSIRGKINALVFDLGGGTFDVSLMTIEKGDIFEVKGVAGDC
                     HLGGEDFDHQMVEHCVQEFKRKFKSDLNENKKALGRLRFACEKAKRILSSTTQTSIEL
                     ECLHEGVDFSMKFTRAKFEELNSSFFEKCIKTVENCLNDAGIKKSCVDEIILVGGSTR
                     IPKVQQMLQDFFDGKQLCKSVNPDEAVAYGAAVLAAKLNGSSNRSVQDVVLSDVTPLS
                     LGIAVRGDKLSVVIPKNTPIPTSNAKNYYTVADDQTLININVYQGERSRDKDNHFLGH
                     FSVDGIPPAPKGEGKVLVCFEIDANGILTVTGGVEATGKVAKITIDNEKRRLSKDEIE
                     RMVREAEVYKFEDVEFKKKADAHNDLEDELYKMRKKIKENNVMNLSNEKLKEMEKVVD
                     DTTKWLEDNQDAPFAELQVKKIHLEFVCKLLI"
     misc_feature    310..>528
                     /gene="LOC139842702"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional; Region: PTZ00368"
                     /db_xref="CDD:173561"
     misc_feature    676..2478
                     /gene="LOC139842702"
                     /note="heat shock 70 kDa protein; Provisional; Region:
                     PTZ00009"
                     /db_xref="CDD:240227"
ORIGIN      
        1 atgtctcatc aaactcgtgg tgctaacact cttccaaact tcactttgac acccgcacaa
       61 tttcaacaac tgcttgctgc cgctcaaggc aacaataacc aagagaacaa ccaagggaat
      121 ctacctacat catgtaccta caaggagttc atgaactgta agcctccatc ctttaatggg
      181 aatgaggaag aagtcgagtt aactcgttgg tttgaaaaag tcgaatcaat ctttcgtatc
      241 tgttcaagcc aaggttcaaa caagaaagct gccgatagtt ctagaagtag ttatgctggg
      301 ataaaaccac aatgtagtcg ttatgataag catcatcttg ggaagtgtat ggctcagtgc
      361 accaagtgca agaaggtggg tcatatagct aagtattgta gaacttctgc tactcctgct
      421 acaaagtcaa acgcgtttgt tccaacttgc tatggttgtg gagaagttgg acatttccgc
      481 aatcagtgtc caaagaacaa gggtaataat ggtaatgcta agagttgtgc ttttgtgata
      541 actgccgaag aagcccgtga ggatgatgaa gtgataacgg actacgtcac gtttaaaact
      601 gaaaaaaaaa aatacaatcc taaacgaatt gacttaagag taatggcgga aggaagtgga
      661 agcggcgacg ttttggcgat tgggattgat ctcggaacaa cgtattcatg tgttggtgca
      721 ttgaaagatg gtcgtattga gatcatacct aatgaacaag gcaacagaac gacgccgtca
      781 tgtgttgctt tcactgattc tcaacgtttt gttggtgatg gtgccaaaaa tcaagcactt
      841 gttaactcag ctaacaccat atttgatgca aagaggttga taggaaggag tttcagtgat
      901 gcccaagttc aagaagacat aaagttgtgg ccttttaagg ttacaggtgg tcttggtgac
      961 acaccaacta ttgttgtctc atacaaaggt caaaagaagg aatttttggt tgaagaaatt
     1021 tcatcaatga ttcttgctaa gatgaaagaa agcgctgaaa cgtatattgg agatgttgtg
     1081 aagaatgccg ttgtaaccgt ccctgcttat ttcaatgatg cacaacgtca agctacaaaa
     1141 gatgcgggca ctattgctgg tttaaacgtt gttcgtatga tcaacgagcc tactgcagct
     1201 gcaattgctt atggtcttaa taataagaca tctattcgtg gcaagataaa cgcgctcgtt
     1261 ttcgatttgg gtggtggtac tttcgatgtc tctttaatga ctattgagaa aggtgatatt
     1321 tttgaggtga aaggtgttgc cggtgactgt catttaggag gtgaggattt tgatcatcaa
     1381 atggtggaac attgtgttca agaatttaaa aggaaattta aatcggattt gaatgagaac
     1441 aaaaaagcgt tgggaaggtt gagatttgcg tgcgagaaag ctaaaaggat tctatcgtct
     1501 actactcaaa cgtcaatcga attggaatgt ttgcacgaag gagttgattt ttctatgaaa
     1561 tttactcgag ctaaatttga agagttgaac agtagcttct ttgaaaagtg catcaagacc
     1621 gttgagaatt gtttaaacga tgcagggatt aagaagtcgt gtgtggatga gataattctc
     1681 gttggcgggt ccactaggat accgaaggta caacaaatgt tgcaggactt ttttgatggt
     1741 aagcagttat gcaaaagcgt gaaccctgat gaagcggttg catatggtgc agccgttttg
     1801 gctgcaaagt tgaatggttc gagtaatagg agtgtccaag atgtggtgtt atcggatgta
     1861 actccgttat cgcttggtat cgcagtacgg ggtgataaac ttagtgttgt gattccaaaa
     1921 aataccccga ttcctacaag taatgctaaa aattattata cagtagctga cgaccaaact
     1981 ttgataaata tcaatgtgta tcaaggtgaa agatctagag ataaagataa ccactttttg
     2041 ggtcacttta gtgttgatgg aataccgcct gcacctaaag gagaaggtaa agtattggtg
     2101 tgctttgaga tagatgctaa tggtattctt actgttactg gtggggtaga agcgactggt
     2161 aaggtagcga agattacaat cgataatgaa aagagaaggc tttcgaagga cgagattgag
     2221 aggatggtaa gagaggctga ggtgtacaaa tttgaggatg tggaatttaa gaagaaagcg
     2281 gatgcgcata atgatttgga agatgagttg tacaaaatga ggaagaagat taaagagaat
     2341 aatgttatga atttgtctaa tgagaagttg aaggaaatgg agaaagttgt tgatgacaca
     2401 accaagtggc ttgaggataa tcaagatgca ccttttgctg agcttcaggt taagaagatt
     2461 caccttgagt ttgtttgcaa actgctgatt tag
//
LOCUS       XM_071832817             540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842703), mRNA.
ACCESSION   XM_071832817
VERSION     XM_071832817.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..540
                     /gene="LOC139842703"
                     /note="uncharacterized LOC139842703; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842703"
     CDS             1..540
                     /gene="LOC139842703"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688918.1"
                     /db_xref="GeneID:139842703"
                     /translation="MGKLKLPTGTLLPGYGEGWADELPQVLWAFRTTPKGSNRETPFS
                     LVYGSEVPTEIAVPTQRVMEFNDESNVINFKENLDLLEERLDIAAIREASNKQKISKY
                     YNQRLRERTFHPGDFVWRNNNASQVEDTGKLGPNWEGPYVIAEALGNGAYNLKTHDGK
                     FVPRTWHATNLKKFYVQVF"
ORIGIN      
        1 atgggcaagt tgaagttacc aacggggaca ttgttgccgg gatacgggga aggttgggcg
       61 gatgagcttc cgcaagtctt atgggcgttt cgaaccacac ccaaaggaag caacagagaa
      121 acgccgttca gccttgttta tggctccgaa gtaccgactg aaattgccgt tcctacccaa
      181 cgcgtgatgg agttcaatga tgagtccaac gttatcaact tcaaggaaaa tttggattta
      241 ttggaggaaa ggctcgatat cgctgctatc agggaagcgt caaacaaaca gaaaatttcc
      301 aagtactata atcaacgtct aagggaacgt actttccatc ccggtgattt cgtgtggcgt
      361 aacaacaatg ctagtcaggt cgaagatacc ggaaaattgg gacccaactg ggaaggccca
      421 tatgtgattg cagaagcttt ggggaacgga gcgtacaatt tgaagacgca tgatggcaaa
      481 tttgtgccgc gtacttggca cgcaaccaac ttaaagaagt tctacgttca agtattttga
//
LOCUS       XM_071832818             795 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842704), mRNA.
ACCESSION   XM_071832818
VERSION     XM_071832818.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..795
                     /gene="LOC139842704"
                     /note="uncharacterized LOC139842704; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842704"
     CDS             7..771
                     /gene="LOC139842704"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688919.1"
                     /db_xref="GeneID:139842704"
                     /translation="MSLSLIQGYSSEEGEEEQKEDYFTSSDDDDEVNHQHRRNDDVSD
                     DRTTSNKFRTSLSDPPNPSDSSSSLLPSAFLAFSEISGPPQFLNNSVGGLVSAEKDND
                     EPIWRHGRRRNRRDKNDVPEGAVMQAKAQLVGIRERVSSDAGSNNASTQSNVSSNATQ
                     GSAKRVATATNPNAEDAKDLLRMCVRCGIPKTFSNARGMVCPMCGDRPIKETDESLKK
                     KGSMIKDKEKNKRMKGQSSHATWKSETEMHLRQQFD"
ORIGIN      
        1 acaacaatga gtctgtcact aattcagggt tattcgtctg aagaaggaga agaagaacaa
       61 aaagaagatt acttcacttc ttcggacgac gacgacgaag taaaccacca acaccgtcgg
      121 aacgacgacg tttctgatga ccgtacaacc agcaacaaat tcagaacatc cctctctgat
      181 ccaccgaatc cctccgactc ttcttcttct ttgcttcctt cagcgtttct cgcattctct
      241 gaaatttcag gacctccgca gtttctgaac aactctgttg gagggttggt atcagcagaa
      301 aaagataatg atgaaccgat atggcgacat ggtcgtcgga gaaatcgcag agacaaaaat
      361 gatgtgcctg aaggtgctgt gatgcaggct aaagctcaat tagttggaat tcgtgagaga
      421 gtaagtagtg atgctgggag taataatgca tcaactcaat ctaacgtttc ttctaatgca
      481 actcaaggat ctgcaaaacg tgtggcaact gcaactaacc caaatgctga agatgccaaa
      541 gaccttttga ggatgtgtgt gcggtgtggg atacctaaaa cattctctaa tgcacgaggg
      601 atggtatgcc ccatgtgtgg tgatcgtcct attaaagaga ctgatgaatc gttaaagaag
      661 aaagggtcga tgatcaaaga taaggaaaag aataaacgca tgaaaggtca gtcgtcacat
      721 gctacttgga aaagtgaaac agagatgcat cttcgacaac agtttgatta aaaagaacct
      781 tacactacta gtctt
//
LOCUS       XM_071832819            1034 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable E3
            ubiquitin-protein ligase RHC1A (LOC139842705), partial mRNA.
ACCESSION   XM_071832819
VERSION     XM_071832819.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..>1034
                     /gene="LOC139842705"
                     /note="probable E3 ubiquitin-protein ligase RHC1A; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139842705"
     CDS             318..>1034
                     /gene="LOC139842705"
                     /codon_start=1
                     /product="probable E3 ubiquitin-protein ligase RHC1A"
                     /protein_id="XP_071688920.1"
                     /db_xref="GeneID:139842705"
                     /translation="MSSGDYMHWCYQCQRPVCLRGRNPVCQYCSGGFVQELSEVFEPG
                     DIGPTLPHEPSDYGFMEPYPDPRNRIMDAFAESIRQRTAGRNPNFDPRRRRSGFVPEH
                     GVVPWFIIDGQGPARTSVNDSRQAPPPATRSAIDSMPTIKISYKHLNTDSHCPVCKDE
                     FELGSEARQMPCNHIYHSGCIEPWLVLHNSCPVCRLQLPAQGTTRGSSSSGYFDRTGN
                     YVEYVANDIEDAWLDSIDADP"
     misc_feature    336..428
                     /gene="LOC139842705"
                     /note="zinc-ribbon; Region: zinc_ribbon_9; pfam14369"
                     /db_xref="CDD:433910"
     misc_feature    777..902
                     /gene="LOC139842705"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF126, RNF115, and similar proteins; Region:
                     RING-H2_RNF126-like; cd16667"
                     /db_xref="CDD:438329"
ORIGIN      
        1 tatccttacc ttatcaaaga aaaggctagt gcacaagggt ggacatgtaa ttgtgacaat
       61 catttgttta ttttaggaag taagtttaga aggtaagtgc tcaaatattc tcctcttttc
      121 ataaaaattt agagacaatg gaatttcact atgtttttgt ttctgtctta ttcaagaaca
      181 gagactcgtg tatcttggaa ggaggtcctt ttccgtacat cccatcattc tcgtttgcta
      241 tcatctagtt gcatacattt gggtcttcaa gtatgagatt ccgaaccttg tatgtgaaca
      301 cctgttattg acaagcaatg tcaagcggcg actatatgca ttggtgctac caatgccagc
      361 gaccagtctg tcttcggggt cgtaatcctg tttgccagta ttgctctgga ggattcgtgc
      421 aagaactaag tgaggtgttt gagcctggag acattgggcc tactcttcca cacgagcctt
      481 ctgattacgg gttcatggaa ccctatccag acccaagaaa cagaatcatg gacgcttttg
      541 ctgagtcaat aagacagaga acggcaggaa gaaaccctaa ctttgatcca agaagaaggc
      601 gatctgggtt cgtcccggaa catggtgtcg ttccatggtt catcattgat ggtcaaggcc
      661 cggctcggac gtctgtcaat gatagtagac aagcgccacc accagcaacc cgttcagcaa
      721 ttgattctat gcccactatt aagatctcat ataaacacct taacactgat tctcactgcc
      781 cagtttgtaa agatgaattt gaattgggat ctgaggctag gcaaatgcca tgcaaccata
      841 tctatcattc aggttgcatc gagccttggt tggttctgca taattcttgc cccgtgtgtc
      901 ggttgcagtt gccagctcag ggtacaacta ggggaagcag cagcagcggt tattttgacc
      961 ggacaggaaa ttatgtcgag tatgttgcta atgacatcga ggatgcatgg ctcgatagca
     1021 ttgacgcaga tcca
//
LOCUS       XM_071832820             552 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842706), mRNA.
ACCESSION   XM_071832820
VERSION     XM_071832820.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..552
                     /gene="LOC139842706"
                     /note="uncharacterized LOC139842706; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842706"
     CDS             1..552
                     /gene="LOC139842706"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688921.1"
                     /db_xref="GeneID:139842706"
                     /translation="MSVVLVVASLVFVLSFALLSKMSPNATTPVHHLSLRSVLEKEKL
                     NDTNFLYWYRNLRIVLKVEKKSYILDGPVPEEPPANATKSIRDAWTKHMDDSTDVACL
                     MLATMILDLQKDLEHHDAFEMLKQLKEMFQQQARQQRFETVRALHACKMTEGTSVSSY
                     VLKMKSYIDQLERLDLPLVLSWQ"
ORIGIN      
        1 atgtctgttg ttttagttgt agcatctctc gtttttgtcc tgagcttcgc cctactgtct
       61 aagatgtcac ctaatgcaac tacacccgtt caccaccttt ctctaagatc tgtcttagag
      121 aaggaaaaac tcaatgatac gaacttctta tactggtatc gtaatttgag aattgttctc
      181 aaagtcgaaa agaagtcgta tatacttgat ggacccgttc ccgaggaacc ccctgctaat
      241 gccactaaga gcatccgaga tgcttggact aagcatatgg atgactccac agatgtagca
      301 tgcctcatgt tagccaccat gattctagac ttgcaaaagg acctggagca tcatgatgcc
      361 tttgagatgc ttaagcagct aaaggaaatg ttccagcaac aagctaggca acaacgcttt
      421 gaaactgtca gagcgttaca cgcatgcaag atgacagagg ggacatctgt aagctcttat
      481 gttctaaaaa tgaagagcta catagatcaa cttgagaggc tggatcttcc attggtcctg
      541 agttggcaat ag
//
LOCUS       XM_071832821             852 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides signal peptidase complex
            subunit 2-like (LOC139842707), mRNA.
ACCESSION   XM_071832821
VERSION     XM_071832821.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..852
                     /gene="LOC139842707"
                     /note="signal peptidase complex subunit 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139842707"
     CDS             79..675
                     /gene="LOC139842707"
                     /codon_start=1
                     /product="signal peptidase complex subunit 2-like"
                     /protein_id="XP_071688922.1"
                     /db_xref="GeneID:139842707"
                     /translation="MTTTNGTTTTTTISATNNPKKTNLLDHHSIKHLLDETVTEIVTN
                     RGYNEDVRMSNVRLLIGAIIVIVALFAQFYNKKFPDNRNFLIGCIVLYVLFNGILQLV
                     IYTKEKNAFLLTYPPSGSAYNSTGLMISSKLPRFSDMYTLTIASADPKSISAKPTVEF
                     TKSVTKWFTKDGVLVEWLFWKDVEALVTNYANANKKSK"
     misc_feature    181..639
                     /gene="LOC139842707"
                     /note="Microsomal signal peptidase 25 kDa subunit (SPC25);
                     Region: SPC25; pfam06703"
                     /db_xref="CDD:461993"
     polyA_site      852
                     /gene="LOC139842707"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actaaaatcc ccaattaaca aagttttcag acaaacccta gaaatcctca atcggaaaat
       61 cagtaaccga aatcggaaat gacgacgaca aacggaacca ccacgaccac caccatttcc
      121 gcaaccaata accctaaaaa aacgaatcta ttagatcatc actcaatcaa acacttactc
      181 gatgaaactg tcactgagat cgttacgaat cgcggttaca atgaagatgt gagaatgagt
      241 aacgttagat tgttgatcgg tgcgatcatt gtaatcgttg ctctttttgc tcagttttac
      301 aataagaagt ttccagataa ccgaaatttc ctcattggat gcattgtatt gtatgtgcta
      361 ttcaatggga tattgcagct ggtcatctac actaaggaaa agaatgcgtt tttgcttact
      421 tatcctcctt caggttctgc ttataacagc actgggttga tgatatcttc taagttgccc
      481 agattctctg acatgtatac tctcactata gctagtgccg atccaaaatc catttctgca
      541 aaacctactg tagagttcac caaaagcgtt actaaatggt tcacaaagga cggagtgttg
      601 gtggaatggt tgttctggaa agatgttgag gccctagtta ccaactatgc taacgctaac
      661 aagaaaagca agtaaacttt gaacttcata ttgaattgtg atccataagg gatataaaca
      721 aaatatcgag aactcgtaga catattttac caaacagtaa tggatatttt tattttaaac
      781 ctacaaacat gtgagtggat ttggtacttt actggcaaaa tttattgaaa atccacatat
      841 ggctttttta aa
//
LOCUS       XM_071832822            1290 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842708), mRNA.
ACCESSION   XM_071832822
VERSION     XM_071832822.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1290
                     /gene="LOC139842708"
                     /note="uncharacterized LOC139842708; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842708"
     CDS             1..1290
                     /gene="LOC139842708"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688923.1"
                     /db_xref="GeneID:139842708"
                     /translation="MPVKQVLTKLEISGRLALWAVELGAYQISYLPCNAVKGQVLADY
                     LAEMTGELEVINERTELKPVVEGAGVGLVLASPSGEEHTYALRFNFDVTNNEAEYEAL
                     LAGLNIVRKMKITKLRAFTDSQLVANQFNGSFEAHDSSMQKYLQLLKELAVRFEHFEL
                     AQVPRSQNKKADTLSKLAALTFSHFRKQVWVEELPSKSIDNDLIVAFVVEEQLNWMEP
                     ILQYIHNDILPSDKREARLVRERAPMYIIQNDILYRKSFCGPMMLCVGPIEAEMTIDE
                     VHNGPFPAGPGNVKFLIVAIDYFIKWVEAKAVRTITGVQVRNFMWEYIVCRFGIPREL
                     VSDNGAQIAKDPFKTWCTNLNIIQKFTLVTHPQANGLCEVTNRNIVSGRCVLRNNDAS
                     RAEKLGKLGPNCEGPYQVVKINAAGSYKLADIEGRIT"
     misc_feature    199..537
                     /gene="LOC139842708"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    814..1083
                     /gene="LOC139842708"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgccggtca agcaagtctt aacaaaacta gagatatctg gtagacttgc gttgtgggca
       61 gtagagttag gtgcttatca aatctcttac cttccgtgca atgctgtaaa gggccaagtt
      121 ttggcagatt atctcgccga aatgactggg gagttggagg tgattaatga gcgaacagaa
      181 ttaaaaccag tagttgaagg cgctggtgtg ggtttggtgt tggcaagccc aagtggtgag
      241 gagcatacgt acgcgttacg ttttaatttt gatgtgacaa ataatgaagc ggaatatgaa
      301 gccttgcttg ctggtttaaa tattgtgcga aaaatgaaaa tcactaaatt gcgagcattt
      361 acagattcgc aattagtggc aaatcagttt aatggctctt ttgaggcaca tgattcctca
      421 atgcagaaat atttacagtt gttgaaagaa ttggcagtgc ggttcgagca ttttgaactc
      481 gcgcaagtgc caagaagtca aaataagaag gcggatactt tgagtaagtt agccgctcta
      541 acgttttcgc actttcgaaa acaagtttgg gtcgaggaat tgccaagcaa atcaatagat
      601 aatgacttaa tagttgcgtt tgttgtagaa gaacagctaa attggatgga accaatcttg
      661 caatacatcc acaatgatat tttgccaagt gataagcgtg aagctcgctt agtaagagag
      721 cgagcaccaa tgtatatcat tcaaaatgac atcttgtatc gtaaatcatt ttgcggtcca
      781 atgatgctgt gtgtgggccc aattgaagca gaaatgacta ttgatgaagt gcataatgga
      841 ccatttcccg cagggcctgg caatgtcaaa ttcctgattg tggcaattga ttattttata
      901 aaatgggtgg aagctaaggc ggttcgcact atcactggag tacaggtgcg caattttatg
      961 tgggagtata ttgtttgcag atttggtatt ccacgtgaat tggttagtga taatggtgcc
     1021 caaatagcga aagatccttt taaaacatgg tgcactaatt taaatataat ccaaaagttt
     1081 acattagtga cgcatccaca ggctaatggc ttatgcgaag taaccaaccg caatattgta
     1141 agcggcagat gcgtactgcg gaataatgat gcaagtagag cagaaaaact tggcaaatta
     1201 ggacctaatt gtgagggtcc ttatcaagtt gtgaaaatta atgcagcagg ttcatataag
     1261 ctcgcagata tagaagggcg aataacatga
//
LOCUS       XM_071832823             639 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842709), mRNA.
ACCESSION   XM_071832823
VERSION     XM_071832823.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..639
                     /gene="LOC139842709"
                     /note="uncharacterized LOC139842709; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842709"
     CDS             1..639
                     /gene="LOC139842709"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688924.1"
                     /db_xref="GeneID:139842709"
                     /translation="MPIIVSCKVAETGITIMKVHVDNGSSVDIVYVQCFVQLPENIRA
                     NLQPTAASLTGFAGEFSLPMGVLSLDVELFDENDDSLVRRARLDFYVMRTSSRYNMLL
                     GRTALGKFGIVPSTIHGMIKFATHKGVAIISSASIMPICAAVNVKSAVQETADAADNM
                     IVYMDIFAWCENDMTGVPRHIAEQILNVNPALKPVVQKRRGMAPDRAKWLCE"
     misc_feature    13..312
                     /gene="LOC139842709"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(64..66,70..72,76..78,157..165,301..303)
                     /gene="LOC139842709"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    64..72
                     /gene="LOC139842709"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    64..66
                     /gene="LOC139842709"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(157..168,178..189)
                     /gene="LOC139842709"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgcctataa tagtatcgtg caaggtagcg gaaactggaa tcacaatcat gaaagttcat
       61 gttgataatg gcagcagtgt tgacattgtt tatgtgcaat gttttgttca actgccagag
      121 aatattagag caaatttaca accaaccgca gcctcgctaa caggttttgc tggagaattc
      181 tcattgccta tgggcgtatt gtctttagat gttgagcttt tcgatgaaaa tgatgatagt
      241 ttagtgcggc gagcgcggtt agatttctat gttatgcgga cttcatctcg ctataacatg
      301 ttgttaggca gaactgcctt aggtaaattc ggaattgttc catctacaat tcatggcatg
      361 attaaattcg caacgcataa aggtgttgcg ataataagtt cagcaagcat catgcccatt
      421 tgtgcggctg ttaatgtaaa aagcgcagtt caagaaaccg ctgatgccgc ggacaacatg
      481 atagtgtaca tggatatttt tgcttggtgt gaaaatgata tgactggcgt tccgcgtcat
      541 attgcggaac aaatacttaa tgtaaatcca gctttaaaac ctgtagtgca gaagcgtaga
      601 ggcatggccc ccgatcgcgc taagtggctg tgcgaatag
//
LOCUS       XM_071832824            1917 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ABC transporter G family
            member 1-like (LOC139842712), mRNA.
ACCESSION   XM_071832824
VERSION     XM_071832824.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1917
                     /gene="LOC139842712"
                     /note="ABC transporter G family member 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 Proteins"
                     /db_xref="GeneID:139842712"
     CDS             1..1917
                     /gene="LOC139842712"
                     /codon_start=1
                     /product="ABC transporter G family member 1-like"
                     /protein_id="XP_071688925.1"
                     /db_xref="GeneID:139842712"
                     /translation="MASLVHNNGICPEPVEERRPCGIKTERGSGAYLTWEDLGVTVSS
                     SNWTAKNDESKSLLNGVTGYAKPGEIVAIMGPSGCGKSTLLDSLAGRLASNVRHTGRV
                     LVNGRKQRLTFGTLAYMTQEPVLTWTLTVKETVYYSAELQLPKLMPKSEKKARADKII
                     KDMGLRDTMNTRIGGWGIKGISGGQKRRLSICVELLTHPKLLLLDEPTSGLDSAASYY
                     VMNQIVKLTQLYGMTVLAAIHQPSSQIFGLFNNLCLLSLGKTVYFGPTPATNQFFAVN
                     GFACPNLQSPADHYLMTINPDFDMFMFSNYRDTVGEKIPAEQVIVALAESYKSSQIYM
                     DVKNEIHVICRKEGDLVEIKRSLQPSFVTQCLVLSQRSFINMYRDLGYYWLRLGIYIA
                     LGIALGTVFYQIGYSFGSIKARVSLIMFVSTFLTILAIGGFPSFVEEIKVFQWERLNG
                     HYGVGSFVMSHAISSAPYLLVISLIPGSIAYALMGLQKGIKQIIFFELVLFVSMLLVE
                     CLMMIVACVVPNLLMGIISGAGIQGLMILAAGFFRLPNDLPHVFWKYPMYYISFHKYA
                     LQGLYKNEFEGLRFPEYIGGPPTINGKMILKDELEIEMIYSKWIDLGILFGMVVIYRI
                     ILFCTIKALERMRK"
     misc_feature    <46..>270
                     /gene="LOC139842712"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     Region: YddA; COG4178"
                     /db_xref="CDD:443337"
     misc_feature    163..1893
                     /gene="LOC139842712"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; Region: 3a01204; TIGR00955"
                     /db_xref="CDD:273361"
ORIGIN      
        1 atggctagtt tggttcataa caatggcata tgtcctgaac ccgttgaaga aagaagacca
       61 tgtggcatta aaactgaaag gggtagtggg gcctacttga catgggagga tcttggagta
      121 actgtttcaa gctcaaattg gactgcaaaa aatgatgaaa gtaaatcctt acttaatggt
      181 gtcactggtt atgctaaacc aggagaaatt gttgccatta tgggtccttc tggttgtggc
      241 aagtccacac ttcttgattc tttagcagga cggttagctt caaacgtaag gcacactgga
      301 cgagttctag ttaatggacg taagcaaagg cttacatttg gcactttggc atatatgact
      361 caagaaccag ttttaacttg gactttaact gttaaagaaa ccgtttacta ctcagcagaa
      421 cttcaactac ctaaattgat gccaaaatca gagaaaaaag cgagagcaga taaaattata
      481 aaagatatgg ggctacgaga tactatgaac acaagaatag gaggatgggg gataaaagga
      541 attagtggtg gccaaaagcg gcgtttaagt atctgcgtag aacttttgac acaccccaaa
      601 cttctattgc ttgatgagcc tacgagcggt cttgatagtg cagcatcata ttatgttatg
      661 aaccaaattg tcaagctcac tcagttatac gggatgacgg ttttagcagc aatccatcag
      721 cctagcagcc aaatttttgg actttttaac aatctttgtc ttctatcttt ggggaagaca
      781 gtatattttg gtcctactcc tgcaacaaat cagttctttg ctgtaaatgg ttttgcttgt
      841 ccaaatctac aaagtcctgc agatcactac ctcatgacaa tcaacccaga ttttgatatg
      901 ttcatgtttt ctaactatcg ggacactgtt ggtgaaaaaa ttcctgctga gcaagtaatc
      961 gttgcattag ctgaatccta caagtcatca cagatatata tggatgtcaa aaatgaaata
     1021 catgttatat gtagaaagga aggggatcta gttgagataa aacgaagcct gcaacccagt
     1081 ttcgttacac agtgtttagt actctcacaa agatcattca taaacatgta tcgcgatctt
     1141 ggatactatt ggttgcgact tggtatatat attgccctcg gcattgcact tggtacagta
     1201 ttttaccaga ttggttacag ctttggctca ataaaggcta gggtttcact gatcatgttt
     1261 gtttctacgt tcttgaccat tttagccatt ggtgggtttc cttcgtttgt ggaggaaatt
     1321 aaggtttttc aatgggagcg attaaacggt cactatggag ttggatcgtt tgttatgagt
     1381 catgcaatct cttcggcgcc atacctactt gtcatctctt taatcccagg atcaatagcg
     1441 tacgcgctca tgggacttca aaaagggatc aaacaaatca tctttttcga attagtccta
     1501 tttgtttcaa tgttactcgt cgaatgttta atgatgattg tcgcctgcgt tgtgccaaat
     1561 ttgctcatgg gtatcatatc cggtgctgga atacaagggt tgatgatact agctgcgggg
     1621 ttttttcggt taccaaacga tttacctcat gttttctgga aatacccaat gtactatatt
     1681 tcattccata agtatgcatt acaaggactt tacaaaaatg agtttgaagg acttaggttc
     1741 ccagagtata tagggggtcc tcctactatt aatggtaaga tgatattgaa ggatgaatta
     1801 gaaattgaaa tgatatattc aaagtggatt gatctaggaa tcttgtttgg tatggtggtt
     1861 atttacagga taatactctt ttgtaccata aaagcattag agaggatgag gaaataa
//
LOCUS       XM_071832826             348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842713), mRNA.
ACCESSION   XM_071832826
VERSION     XM_071832826.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..348
                     /gene="LOC139842713"
                     /note="uncharacterized LOC139842713; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842713"
     CDS             1..348
                     /gene="LOC139842713"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688927.1"
                     /db_xref="GeneID:139842713"
                     /translation="MINETGDGSMATHVSDLDFGDPLYLHFSDTSITALISMKLNGTE
                     NYNVWSRAMLLALKTKNKTGFIDGTVIKNTTDNVLALQWDRCNSVVLSWTLNSVSEEF
                     FSGQVFLKLAKTV"
     misc_feature    76..216
                     /gene="LOC139842713"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
ORIGIN      
        1 atgataaatg aaactggtga tgggtccatg gccactcatg tgagtgacct tgattttggt
       61 gatcccttat acctgcattt cagtgataca agtatcactg cccttatttc tatgaaatta
      121 aatggaactg aaaattacaa tgtctggagc agggctatgt tattggctct aaaaactaaa
      181 aacaaaactg gatttataga tggtactgtc attaaaaata ccactgataa tgtgcttgcc
      241 ttgcaatggg atagatgcaa ctctgttgtc ctatcctgga ctttgaactc tgtgagtgaa
      301 gaatttttct ctggtcaagt ctttttaaaa cttgctaaaa ctgtgtag
//
LOCUS       XM_071832827             942 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At5g07610-like
            (LOC139842715), mRNA.
ACCESSION   XM_071832827
VERSION     XM_071832827.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..942
                     /gene="LOC139842715"
                     /note="F-box protein At5g07610-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842715"
     CDS             1..942
                     /gene="LOC139842715"
                     /codon_start=1
                     /product="F-box protein At5g07610-like"
                     /protein_id="XP_071688928.1"
                     /db_xref="GeneID:139842715"
                     /translation="MIRRFLNCVTGGGSSPYPVIEECSNKLVPSSMHAVESNDDLLIE
                     ILLRLLVISLVLFKSVSKCWLSIITNPYFTTLLRQNPKSNPVSGLYIDIEQPESSFVY
                     DFVPLDIRVGQIIRSPSNINFRYEILQSCSGLLLCQEDYHYYVYNPTTNVFKKLPPCP
                     ISNGTTRMAYDPTKSSGTTRMAYDPTKSPHYKLAYARPQDYNDGLVLNIRIYTYSSET
                     GIWSDCGDSDCHDRYWSQSYFSFLYHVIYWSNAIHWVDGSNHNKLSLEDLAITSVQAP
                     GKKCYNHKLFESRGCLLSVCVCPHFSLDRGELKQLNV"
ORIGIN      
        1 atgatacgcc gttttctaaa ttgcgtgact ggaggaggtt catctccata tcctgttatc
       61 gaagaatgca gtaacaaatt agtcccttca tccatgcatg cagttgaatc caacgacgac
      121 cttttaatcg aaatcttgct ccgtttacta gttatttcac ttgtcctatt caaatccgta
      181 tccaaatgct ggttatctat tatcacaaac ccttatttca ccactctact acgccaaaat
      241 cctaaatcga atcctgtttc tggtctctat attgatattg agcagcctga atcatccttt
      301 gtatatgatt ttgtgccgtt agatatcaga gtaggtcaga tcattagatc tccatctaac
      361 ataaatttca ggtatgaaat tctacagtct tgcagtgggt tgcttttgtg tcaagaggat
      421 taccattatt acgtttacaa tccaaccact aatgtgttta agaagcttcc accttgtccc
      481 attagtaatg gtactacgag aatggcttat gatcctacaa aatcatctgg tactacgaga
      541 atggcttacg atcctacaaa atcacctcat tacaaattgg cgtatgctag acctcaagat
      601 tacaatgatg gtcttgttct taatattcga atttatactt actcttcgga aacaggaatt
      661 tggagtgatt gtggtgatag tgattgtcat gatagatatt ggtcccaatc atattttagt
      721 tttttatatc atgtaatata ttggagtaat gctatacatt gggtcgatgg ttcgaatcat
      781 aacaagttaa gtttggagga tctagctatc acaagtgtac aagcacctgg gaagaagtgc
      841 tataatcaca agttgttcga gtctcgtggt tgtttgctta gtgtttgcgt gtgtcctcat
      901 tttagtcttg atcgtggaga gttaaaacag ttaaacgtat aa
//
LOCUS       XM_071832828            1014 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842716), mRNA.
ACCESSION   XM_071832828
VERSION     XM_071832828.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1014
                     /gene="LOC139842716"
                     /note="uncharacterized LOC139842716; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842716"
     CDS             1..1014
                     /gene="LOC139842716"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688929.1"
                     /db_xref="GeneID:139842716"
                     /translation="MSNGHSKWSIKYIVHLDEAMRSFPENWVYPYKLVSIDVWCIDLG
                     EREEDSFMVIDLGGTIMQYKIMSNTLHKLPLNTSTCHAKWNAIGVLNDIVSARDLYDA
                     RLSNDLKVAELIQGNKWVWPEDWLIIFPRLQMLQVPFFSANMKDEVVWVTNEGCRTAQ
                     AWKDLRESSNTIRWHHLVWFSCSNPKQSLFLWLAIQGKLMTHDRMLRWNANGNYACPL
                     CGTCPDSHSHLFFECVYSKKIWITMKKKLLFRGLSNNLMDIVQTLANYHFKKDIWGVI
                     NRFTVAVAAVVYHIWHERNRRIFNKPPRNENDLIKSIKYNIELQLLTLNVKEKKSVKI
                     AAK"
     misc_feature    472..717
                     /gene="LOC139842716"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagtaatg ggcattctaa atggtcgatc aagtacattg ttcatcttga tgaagcaatg
       61 agatcgtttc ctgaaaattg ggtgtaccct tataagttgg tttcgattga tgtttggtgc
      121 attgatttag gcgaaagaga agaggattca ttcatggtta ttgatttagg tggaacgatt
      181 atgcaatata aaatcatgtc aaatactcta cacaagctcc cgttaaacac ctctacttgc
      241 catgctaagt ggaatgctat tggtgtttta aatgatattg ttagtgctag agatctttat
      301 gatgcaaggc tatcaaatga tttaaaagtg gctgaattga ttcaaggtaa taaatgggtg
      361 tggcctgaag attggttaat aatatttcct aggctgcaaa tgcttcaggt tccttttttt
      421 agtgcaaata tgaaagatga agtggtgtgg gtaactaatg aagggtgcag aactgcacag
      481 gcatggaaag atttaaggga aagtagtaat accataaggt ggcatcatct ggtgtggttt
      541 tcatgtagta acccaaagca atccttattc ttgtggttgg ctattcaagg taaactcatg
      601 acacacgata ggatgttgag gtggaatgca aatggtaact atgcttgtcc tctttgtggt
      661 acatgcccag attctcactc acatttgttt tttgaatgtg tttattccaa aaagatttgg
      721 attactatga aaaagaagtt gctgtttaga ggtttgagta acaatttgat ggatattgtt
      781 caaaccttgg caaattatca ttttaaaaaa gacatatggg gtgttattaa tcgattcact
      841 gttgctgttg ctgctgtggt ataccatatt tggcatgaaa gaaataggag aatttttaac
      901 aagcctccta gaaatgaaaa tgatttgata aaaagcatca aatataatat tgagttgcag
      961 ttgttgactc taaatgtcaa agagaagaaa tctgtgaaga ttgcagcaaa gtag
//
LOCUS       XM_071832829             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein At5g07610-like
            (LOC139842717), mRNA.
ACCESSION   XM_071832829
VERSION     XM_071832829.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139842717"
                     /note="F-box protein At5g07610-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842717"
     CDS             1..720
                     /gene="LOC139842717"
                     /codon_start=1
                     /product="F-box protein At5g07610-like"
                     /protein_id="XP_071688930.1"
                     /db_xref="GeneID:139842717"
                     /translation="MAYDPTKSPHYKLVYARPRDYNHVLNNIRIYTYSSETGIWSDCG
                     DRYWSKLSCLKFLEHGIYWSNAIHWVEGSNHNKLCLEDLAITSVQAPGENGCNHKLFE
                     SRGCLLTVCVCPHFSLDRGELKQLNVYEMSIGHCEWSIKYIVHLDEAKRSFPKFWVYP
                     HKLVSIDVWCIVLGEREEDSFMVIDLDGTIMQYKTMSNTLHKLPYSKPFRCYRPPRFQ
                     FIASFAVFFLDEIVRGINSVL"
ORIGIN      
        1 atggcttatg atcctactaa atcacctcat tacaaattgg tgtatgctag acctagagat
       61 tataatcatg ttcttaataa tattcgaatt tatacttact cttcggaaac aggaatttgg
      121 agtgattgtg gtgatagata ttggtccaaa ttatcatgtt taaaattttt agagcatgga
      181 atatattgga gtaatgctat acattgggtt gaaggttcga atcataacaa gttatgtttg
      241 gaggatttag ctatcacaag tgtacaagca cccggggaga acggttgtaa tcacaagttg
      301 ttcgagtctc gtggttgttt acttactgtt tgtgtgtgtc ctcattttag tcttgatcgt
      361 ggagagctaa aacagttgaa cgtatacgag atgagtattg ggcattgtga atggtcgatc
      421 aagtacattg ttcatcttga tgaagcgaag agatcgtttc ctaaattttg ggtgtaccct
      481 cataagttgg tttcaattga tgtttggtgc attgttttag gcgaaagaga agaggattca
      541 ttcatggtta ttgatttaga tggaacaatt atgcaatata aaaccatgtc aaatactcta
      601 cataagctcc cgtattccaa accattccgt tgctaccgtc ctcctaggtt tcaattcatt
      661 gcatcgtttg cagttttctt tcttgatgag atagtacgtg ggatcaactc tgttttatga
//
LOCUS       XM_071832830            1104 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides bifunctional riboflavin
            biosynthesis protein RIBA 1, chloroplastic-like (LOC139842718),
            mRNA.
ACCESSION   XM_071832830
VERSION     XM_071832830.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1104
                     /gene="LOC139842718"
                     /note="bifunctional riboflavin biosynthesis protein RIBA
                     1, chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139842718"
     CDS             1..1104
                     /gene="LOC139842718"
                     /codon_start=1
                     /product="bifunctional riboflavin biosynthesis protein
                     RIBA 1, chloroplastic-like"
                     /protein_id="XP_071688931.1"
                     /db_xref="GeneID:139842718"
                     /translation="MAYSFSVLLLLIFLLIGSSVPSSSPSTTPSPKNFAIVNQVTIAL
                     GAVGVLAVILSLYKIGKADKLAKRVSAARVPTVWGSYVAYCYKAMSDGLEHVAMVKGE
                     IGNGKDILVRVHSECLTGDIFRSARCDCGDQLELAMKQIEEAGRGVVVYLRGHEGRGI
                     GLGHKLRAYNLQDDGRDTVQANEDLGLPIDSRDYSVGAQILKDLGVQTLRLMTNNPAK
                     CIGLKGYGLEVVERVPVLTAITEDNKRYLETKRTKMGHVYEVESKIDLVEKMSNVLKV
                     ARETYVGIRIHNQIKGETVKGKGKEMILKDLGVQTLRLMTNNPAKCIGLKGYGLEVVE
                     RVPVLTAITEDNKRYLETKRTKMGHVYGAGTLH"
     misc_feature    <181..816
                     /gene="LOC139842718"
                     /note="Bifunctional GTP cyclohydrolase II/
                     3,4-dihydroxy-2-butanone-4-phosphate synthase; Region:
                     PLN02831"
                     /db_xref="CDD:215445"
ORIGIN      
        1 atggcttatt cattcagtgt cctgttgctg ttaatttttt tgctcattgg ctcgtcggtt
       61 ccttcatcat ctccatcaac gacaccttcg ccaaagaatt ttgcaattgt gaaccaagtg
      121 accattgctt taggtgctgt tggtgtatta gcagtcattt tgtcactgta taaaattggt
      181 aaagccgata aactagcaaa gcgtgtttct gctgcacgag tacctactgt atggggatca
      241 tatgttgcat attgttataa agcaatgtca gatggattag agcatgttgc gatggttaag
      301 ggtgagattg ggaatggaaa ggatattctt gttagggttc attcagaatg tttaactgga
      361 gacatattta ggtctgctag atgtgattgt ggggaccagt tggaactcgc gatgaaacaa
      421 atcgaagaag ctggtagggg agtggtggtt tatcttagag gtcatgaagg aagaggaatc
      481 gggttaggtc acaagcttcg tgcttataac ttgcaagatg atggtcgtga tactgttcaa
      541 gccaacgagg atcttggttt gcctattgat tctagggatt atagtgtagg agcgcagatt
      601 ttgaaggatt tgggagttca aacactgagg ttgatgacaa acaacccagc caaatgcatc
      661 gggctaaagg ggtatggttt agaagttgta gagagagttc cagttctgac tgccattaca
      721 gaggataata agcgatatct cgagaccaaa cgaaccaaga tgggtcatgt atatgaagtt
      781 gagtcaaaaa tagatctagt cgaaaagatg tcaaacgtgt tgaaagtcgc ccgagaaaca
      841 tatgtgggaa ttaggattca caaccaaatt aagggtgaaa ctgtgaaagg gaaagggaaa
      901 gagatgattt tgaaggattt gggagttcaa acactgaggt tgatgacaaa caacccagcc
      961 aaatgcatcg ggctaaaggg gtatggttta gaagttgtag agagagttcc agttctgact
     1021 gccattacag aggataataa gcgatatctc gagaccaaac gaaccaagat gggtcatgta
     1081 tatggtgcag gaacactcca ttaa
//
LOCUS       XM_071832831             947 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein YCF54,
            chloroplastic-like (LOC139842720), mRNA.
ACCESSION   XM_071832831
VERSION     XM_071832831.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..947
                     /gene="LOC139842720"
                     /note="protein YCF54, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842720"
     CDS             102..758
                     /gene="LOC139842720"
                     /codon_start=1
                     /product="protein YCF54, chloroplastic-like"
                     /protein_id="XP_071688932.1"
                     /db_xref="GeneID:139842720"
                     /translation="MSLMKSLGASAVINLPTAAAITTTTAQLHHSTHSLPFLSVPQHL
                     PKLNTTNITWKTTTPVRTSVAAANSSDTVEKEAESTKKYHFVVANAKFMLDDEEHFQE
                     QLFERVRLFKERNMEQDFWLVIEPKFLDKFPDITKRLKRPAVALVSTNGTWIKFMKLR
                     LDRVLEESFEADSLEEALACNPAKLEFEKPKNWVAPYPKYEYGWWKSFLPATAQKQQV
                     "
     misc_feature    345..614
                     /gene="LOC139842720"
                     /note="Protein of unknown function (DUF2488); Region:
                     Ycf54; pfam10674"
                     /db_xref="CDD:431427"
     polyA_site      947
                     /gene="LOC139842720"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ataagatttt atgattgcat aataacacta gacatcgtct tcttgtctct ctgctacttc
       61 cataactaat ttgtaacacc cagaaaaaag caagcaaaat tatgagtttg atgaaatctt
      121 taggtgcttc ggcggtgatc aacctcccca ccgccgccgc catcactacc accaccgccc
      181 aactccacca ctcaacacat tcactcccat ttctatcagt accacaacat ttgcccaaat
      241 taaatacaac taatatcacc tggaaaacaa ccactcctgt taggacatct gttgctgctg
      301 ctaattcatc cgatacagtc gaaaaggaag ctgagagtac caagaaatac cattttgtgg
      361 ttgcaaatgc aaagtttatg ttggatgatg aagaacattt tcaagagcag ttgtttgaaa
      421 gggttcgtct tttcaaagag agaaacatgg aacaggattt ttggctcgta atcgaaccca
      481 agttcttaga caagttccct gacatcacta agaggcttaa gagacctgca gttgctttag
      541 tttctaccaa cggtacatgg atcaagttta tgaagttgag gttagatcga gttttggaag
      601 aaagctttga agcggatagt ttagaagaag cgttggcatg taatcctgct aagttagagt
      661 tcgagaaacc taaaaattgg gttgcgccat accccaaata cgagtatggt tggtggaagt
      721 ctttcttacc agcaaccgca cagaagcaac aagtatgaag aagacacttt gacacataaa
      781 caggtcaaaa tctgtaaaac gactgttgta ggatcgatag gaaggtttgt atgtttgagg
      841 ttgtaagagt attaagcaat gtttgtaagt ttaaattttt tcgagttgag tttgatgtta
      901 ttatacatta taaatgtatt tcagttgatg gttatgagtt ttgttta
//
LOCUS       XM_071832832            1608 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842721), mRNA.
ACCESSION   XM_071832832
VERSION     XM_071832832.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1608
                     /gene="LOC139842721"
                     /note="uncharacterized LOC139842721; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842721"
     CDS             1..1608
                     /gene="LOC139842721"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688933.1"
                     /db_xref="GeneID:139842721"
                     /translation="MSAFMDNDSKEIADEKIIANLISMLNEFSVVAKAFQMARDWCSQ
                     YTSEDFQLRLLGNRPSSRQYNTPHVSEVAALVMSDFDQSTTSTDIIVNQKNSAAKRIS
                     ELHQLYMALQYPLLFSYGETGYHEEIPYYNNNGTRKTNREQRLRWRRNNQNELPVDLY
                     HNICDAVTRGDTKAASIGKRIVLPSTFTGSPRYLMQNYQDTMTLCREFGNPDLFITFT
                     TNQKWLEIEEMIYYIVGQKQHDRPETIAIHFKVKLDELMHDLMQHHIFGICIAGVYQI
                     EFQKRGLPHAHILIWLQNQDKCKTPDDIDDLIAAGIPSQTQDPDGYKATIDYMLHGPC
                     SGKRMNAPCIIDKKFSEHFPKSYYADSTIDEDGYPNYRRGNNGVKVTKEWCNRSREIK
                     YIFKYLNKGPDRATIKKIWERRKQRECIGPIVYSHPASCECYYLRILLNILRGPRSFE
                     ELRTVDGKIHETFKDACFAYGLINDDREWTQAISEARLWASGAQLRDLFVTILLICDV
                     TNPLKLWEKNWEALSKDILHIKRKKKN"
     misc_feature    421..870
                     /gene="LOC139842721"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgtcagctt tcatggataa tgattctaaa gaaattgctg atgaaaaaat aatagcgaac
       61 ctcattagca tgctcaatga atttagtgtt gttgcgaaag catttcagat ggctagagat
      121 tggtgctctc aatatacatc agaagacttt cagcttcgat tacttggcaa tagaccaagt
      181 tcaagacaat ataacacccc ccatgtatct gaggtggcag cattggttat gagcgacttt
      241 gatcaaagta ctacctcaac agatattatt gtaaaccaga aaaactctgc agcaaaaaga
      301 atatctgaac ttcatcaatt atacatggct ttacaatacc ctttgttgtt ctcttatggt
      361 gaaacaggct atcacgaaga gataccatat tataataata atggcacaag gaaaactaat
      421 cgagaacaaa gactcagatg gcgaagaaat aatcaaaacg aattgcctgt tgacctatac
      481 cataatatat gtgatgcggt tacaagagga gacacaaaag ctgcatcgat cggcaagaga
      541 atagtcttac catcaacttt tacaggaagc ccccgatatc tgatgcaaaa ctaccaagat
      601 acaatgactt tgtgtcggga atttgggaac ccagatttat ttattacctt cacaactaac
      661 cagaaatggc tagaaattga agagatgata tactatattg ttggccagaa acaacatgat
      721 cgtccagaaa caattgcaat acattttaaa gtgaagttag atgaactaat gcacgacctg
      781 atgcaacatc acatttttgg aatatgtata gcaggtgtat atcaaataga gtttcaaaag
      841 cgcggcttac cacatgctca tatactaata tggttgcaaa atcaagacaa atgcaagacc
      901 ccggatgaca ttgatgatct aattgcggct ggaattccct ctcaaacaca ggatccagat
      961 ggatacaagg ctactattga ttacatgtta catggacctt gcagtggaaa acgcatgaat
     1021 gctccatgta tcattgataa aaaattttct gaacattttc caaaatcata ttatgcggat
     1081 tcaacaattg atgaagatgg ataccctaat tatagaagag gaaataatgg agtgaaagtt
     1141 accaaagagt ggtgtaacag atctagagaa attaagtaca tatttaagta cttgaacaaa
     1201 gggccggata gagcaactat caagaaaata tgggagcgtc ggaaacaaag ggaatgcatt
     1261 ggtcctattg tatattctca ccctgcatca tgtgaatgct actatcttag gatactgttg
     1321 aatatattaa ggggacctag atcatttgaa gaacttcgga cagttgatgg aaaaatacat
     1381 gaaacattta aagatgcttg ctttgcatat ggtcttatta atgatgatag agaatggaca
     1441 caggcgatat cggaagcaag gttatgggcg tccggtgcac aacttcgaga tttgtttgtc
     1501 acaatattgt taatttgtga tgtaaccaac ccacttaagt tatgggaaaa aaattgggaa
     1561 gctttatcta aagatatact acatataaag agaaaaaaaa aaaattaa
//
LOCUS       XM_071832833             549 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842722), mRNA.
ACCESSION   XM_071832833
VERSION     XM_071832833.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..549
                     /gene="LOC139842722"
                     /note="uncharacterized LOC139842722; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842722"
     CDS             1..549
                     /gene="LOC139842722"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688934.1"
                     /db_xref="GeneID:139842722"
                     /translation="MENNTCGIKQNTHLAELMHEVRLIIWDEAPMTQRCAFEALDKTL
                     RDILGYKKGRNIRWLFGDLWKYCQLFKLSCIMRVNEYTDSGEVDTRKQKFNKWVLDVG
                     DGNLPAKAKEGEDEPTWIRIPIQFLNSLNFPGMPPHELSLKIGLSVMLLRNVYPSEGQ
                     CNGTRLIITDLQKFVIQARIIT"
     misc_feature    <4..513
                     /gene="LOC139842722"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atggaaaata acacatgcgg aataaagcag aatacacatt tggcagaact aatgcatgaa
       61 gtcagattga taatatggga tgaagctccg atgactcaaa ggtgcgcttt tgaagcactg
      121 gacaaaactt taagggatat attagggtac aaaaaaggta gaaacataag atggttattt
      181 ggagatttgt ggaaatattg tcaacttttc aaactttcat gcatcatgag agtgaatgaa
      241 tacactgata gtggggaagt tgatactcga aagcaaaagt tcaataaatg ggttttggat
      301 gtaggcgatg gaaatctacc tgcaaaagca aaagaaggcg aagatgaacc tacatggatt
      361 cgcatcccta ttcaattctt aaattcatta aatttcccag gtatgccacc gcatgagctc
      421 agccttaaaa taggcctttc ggtaatgctc ttgagaaatg tatatccaag tgaaggccaa
      481 tgtaatggga ctcggctcat tatcactgat ctacaaaaat ttgtcattca ggccagaatc
      541 attacttga
//
LOCUS       XR_011757447            2061 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842724), transcript variant X1, ncRNA.
ACCESSION   XR_011757447
VERSION     XR_011757447.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2061
                     /gene="LOC139842724"
                     /note="uncharacterized LOC139842724; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842724"
     ncRNA           1..2061
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842724"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139842724"
ORIGIN      
        1 tctggcgatg tcatcgccca gggtttgatt catccctcaa aattaaaatt ggttccagaa
       61 tagtctaata ataatcacca ccatcgctca ctctggaatt cttaataacc ccagaaggtt
      121 atcgcgcctc tacatagcct ccatcacctc caatgcttcc atcgcctcca atgcttccat
      181 cgccgtcgcc atcaccgtat ccgtcgccat ccccgttgtc ttttctgcct gtacctctgt
      241 ccgtcgtagc taacgtgatc gtctcctccg tagtatatca gataaatctt tgcttcatta
      301 tgaataattt gtaaatttta gggttccaga tttttagatt aaattatctg ctcttttatt
      361 gatcggtttc atattttgat ttattgtatg tttgctttat ttttcgataa attttattat
      421 tgatttatgt aaccgtaaca gcatagcaag gttcgtattg tgtatggctg caagttggat
      481 tgaccaaaag ttatatttta atgattagtt agggtaaccc tcaatttccc tctatttaaa
      541 atattttgtc gctatacatt gtcatactaa agatgtactt aatattttgg taagaaattt
      601 aagttgcttt aggttggtag tgttggttat tatctttatg tctatgtcaa gttataaccg
      661 tttttgttaa tattggttag attattgtta aacacatgaa tgacattgat cgtgcagctg
      721 ctggatagct tattttgagc tcaaggatct tcaagtaaga ttcacttatc attacgatat
      781 cattaacacg cgtaattttg gtttattata ttaattagtc ggtgttttta tatgtgtaat
      841 tacaaaatgt cattttagat taaatgaata atgatttaat gattttaggg cttccaatga
      901 tgatggtatg atggtcagtt aaaggacatc ttttttaatt tgagttcttt cttcgtatta
      961 tcgtttactt aaatgaatgc atatatatac ataacatact aactttttgg tattaatatt
     1021 catatatata ttagtgtaca catttgatgc cacctttcaa aagctgatcg ccttgaggtt
     1081 tagaagcttt gtggaagacg ggtttcgagt ctgcaagttt tgattgagtt ttacgtatta
     1141 ctttacttaa aatacatagc actttgcttt ctttgaaatt atgattatta tgaatataag
     1201 gtcactaatt gtgaacgtgg tttgattcct ttgtttgttt aatcaaagcc caccttattt
     1261 taattaagtt gagtttctgt aacagtactt tgcagggaga ccaccaacga cgtcaatcgt
     1321 cgttgctcta accaccactg tcgttgtttc agctcccgcc tttaactttt tcatttaccg
     1381 tatgtttttt ccccaaaatg tgtttgttga ttttatcctc tccgtcggtt gttccagggt
     1441 taggttaggt ggtgttttct tcaccaccgc tctagggttt cgttggttta atccggatga
     1501 ttaaatacac atgccttctt cttcttcata cagtcgttac agtcaacgat aagggatttt
     1561 gtaggtttgc tgattttggt taattgccgt gaattgaaac tcactttaag ccatcattat
     1621 aacaggtgat agagttccac cagcttacaa aaacaaacat tatgctctag ccaactaact
     1681 acagaatatg caacctgcat ccaaatattg cagctgacac ataaaagaaa gggaaggtaa
     1741 tcgtttaatg tcaactgctg aaattcaggc caaaattgac gatctggatt ttgatttgtg
     1801 ttgctaaagc ctaggttgta tgcaaagttg caattgaagt tgaaatcaaa tatccttaaa
     1861 cgcatcacct aaataagacc aaggttggcc acaattgaag ttatgtaacg tttcattagt
     1921 ctgcgccaat attgaatgac tgtgttagta gcatttttga atgcattgtg tacaccttta
     1981 taaacacttc cgatattaac taacgagaac cactttaccg gtgcaacaca tatgataaat
     2041 tcagtacgaa cataatatat a
//
LOCUS       XR_011757448            2077 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842724), transcript variant X2, ncRNA.
ACCESSION   XR_011757448
VERSION     XR_011757448.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2077
                     /gene="LOC139842724"
                     /note="uncharacterized LOC139842724; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842724"
     ncRNA           1..2077
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842724"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139842724"
ORIGIN      
        1 tctggcgatg tcatcgccca gggtttgatt catccctcaa aattaaaatt ggttccagaa
       61 tagtctaata ataatcacca ccatcgctca ctctggaatt cttaataacc ccagaaggtt
      121 atcgcgcctc tacatagcct ccatcacctc caatgcttcc atcgcctcca atgcttccat
      181 cgccgtcgcc atcaccgtat ccgtcgccat ccccgttgtc ttttctgcct gtacctctgt
      241 ccgtcgtagc taacgtgatc gtctcctccg tagtatatca gataaatctt tgcttcatta
      301 tgaataattt gtaaatttta gggttccaga tttttagatt aaattatctg ctcttttatt
      361 gatcggtttc atattttgat ttattgtatg tttgctttat ttttcgataa attttattat
      421 tgatttatgt aaccgtaaca gcatagcaag gttcgtattg tgtatggctg caagttggat
      481 tgaccaaaag ttatatttta atgattagtt agggtaaccc tcaatttccc tctatttaaa
      541 atattttgtc gctatacatt gtcatactaa agatgtactt aatattttgg taagaaattt
      601 aagttgcttt aggttggtag tgttggttat tatctttatg tctatgtcaa gttataaccg
      661 tttttgttaa tattggttag attattgtta aacacatgaa tgacattgat cgtgcagctg
      721 ctggatagct tattttgagc tcaaggatct tcaagtaaga ttcacttatc attacgatat
      781 cattaacacg cgtaattttg gtttattata ttaattagtc ggtgttttta tatgtgtaat
      841 tacaaaatgt cattttagat taaatgaata atgatttaat gattttaggg cttccaatga
      901 tgatggtatg atggtcagtt aaaggacatc ttttttaatt tgagttcttt cttcgtatta
      961 tcgtttactt aaatgaatgc atatatatac ataacatact aactttttgg tattaatatt
     1021 catatatata ttagtgtaca catttgatgc cacctttcaa aagctgatcg ccttgaggtt
     1081 tagaagcttt gtggaagacg ggtttcgagt ctgcaagttt tgattgagtt ttacgtatta
     1141 ctttacttaa aatacatagc actttgcttt ctttgaaatt atgattatta tgaatataag
     1201 gtcactaatt gtgaacgtgg tttgattcct ttgtttgttt aatcaaagcc caccttattt
     1261 taattaagtt gagtttctgt aacagtactt tgcagggaga ccaccaacga cgtcaatcgt
     1321 cgttgctcta accaccactg tcgttgtttc agctcccgcc tttaactttt tcatttaccg
     1381 tatgtttttt ccccaaaatg tgtttgttga ttttatcctc tccgtcggtt gttccagggt
     1441 taggttaggt ggtgttttct tcaccaccgc tctagggttt cgttggttta atccggatga
     1501 ttaaatacac atgccttctt cttcttcata cagtcgttac agtcaacgat aagattttgt
     1561 atttggaagg gattttgtag gtttgctgat tttggttaat tgccgtgaat tgaaactcac
     1621 tttaagccat cattataaca ggtgatagag ttccaccagc ttacaaaaac aaacattatg
     1681 ctctagccaa ctaactacag aatatgcaac ctgcatccaa atattgcagc tgacacataa
     1741 aagaaaggga aggtaatcgt ttaatgtcaa ctgctgaaat tcaggccaaa attgacgatc
     1801 tggattttga tttgtgttgc taaagcctag gttgtatgca aagttgcaat tgaagttgaa
     1861 atcaaatatc cttaaacgca tcacctaaat aagaccaagg ttggccacaa ttgaagttat
     1921 gtaacgtttc attagtctgc gccaatattg aatgactgtg ttagtagcat ttttgaatgc
     1981 attgtgtaca cctttataaa cacttccgat attaactaac gagaaccact ttaccggtgc
     2041 aacacatatg ataaattcag tacgaacata atatata
//
LOCUS       XR_011757449            2050 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842724), transcript variant X3, ncRNA.
ACCESSION   XR_011757449
VERSION     XR_011757449.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2050
                     /gene="LOC139842724"
                     /note="uncharacterized LOC139842724; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842724"
     ncRNA           1..2050
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842724"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139842724"
ORIGIN      
        1 tctggcgatg tcatcgccca gggtttgatt catccctcaa aattaaaatt ggttccagaa
       61 tagtctaata ataatcacca ccatcgctca ctctggaatt cttaataacc ccagaaggtt
      121 atcgcgcctc tacatagcct ccatcacctc caatgcttcc atcgcctcca atgcttccat
      181 cgccgtcgcc atcaccgtat ccgtcgccat ccccgttgtc ttttctgcct gtacctctgt
      241 ccgtcgtagc taacgtgatc gtctcctccg tagtatatca gataaatctt tgcttcatta
      301 tgaataattt gtaaatttta gggttccaga tttttagatt aaattatctg ctcttttatt
      361 gatcggtttc atattttgat ttattgtatg tttgctttat ttttcgataa attttattat
      421 tgatttatgt aaccgtaaca gcatagcaag gttcgtattg tgtatggctg caagttggat
      481 tgaccaaaag ttatatttta atgattagtt agggtaaccc tcaatttccc tctatttaaa
      541 atattttgtc gctatacatt gtcatactaa agatgtactt aatattttgg taagaaattt
      601 aagttgcttt aggttggtag tgttggttat tatctttatg tctatgtcaa gttataaccg
      661 tttttgttaa tattggttag attattgtta aacacatgaa tgacattgat cgtgcagctg
      721 ctggatagct tattttgagc tcaaggatct tcaagtaaga ttcacttatc attacgatat
      781 cattaacacg cgtaattttg gtttattata ttaattagtc ggtgttttta tatgtgtaat
      841 tacaaaatgt cattttagat taaatgaata atgatttaat gattttaggg cttccaatga
      901 tgatggtatg atggtcagtt aaaggacatc ttttttaatt tgagttcttt cttcgtatta
      961 tcgtttactt aaatgaatgc atatatatac ataacatact aactttttgg tattaatatt
     1021 catatatata ttagtgtaca catttgatgc cacctttcaa aagctgatcg ccttgaggtt
     1081 tagaagcttt gtggaagacg ggtttcgagt ctgcaagttt tgattgagtt ttacgtatta
     1141 ctttacttaa aatacatagc actttgcttt ctttgaaatt atgattatta tgaatataag
     1201 gtcactaatt gtgaacgtgg tttgattcct ttgtttgttt aatcaaagcc caccttattt
     1261 taattaagtt gagtttctgt aacagtactt tgcagggaga ccaccaacga cgtcaatcgt
     1321 cgttgctcta accaccactg tcgttgtttc agctcccgcc tttaactttt tcatttaccg
     1381 tatgtttttt ccccaaaatg tgtttgttga ttttatcctc tccgtcggtt gttccagggt
     1441 taggttaggt ggtgttttct tcaccaccgc tctagggttt cgttggttta atccggatga
     1501 ttaaatacac atgccttctt cttcttcata cagtcgttac agtcaacgat aaggtttgct
     1561 gattttggtt aattgccgtg aattgaaact cactttaagc catcattata acaggtgata
     1621 gagttccacc agcttacaaa aacaaacatt atgctctagc caactaacta cagaatatgc
     1681 aacctgcatc caaatattgc agctgacaca taaaagaaag ggaaggtaat cgtttaatgt
     1741 caactgctga aattcaggcc aaaattgacg atctggattt tgatttgtgt tgctaaagcc
     1801 taggttgtat gcaaagttgc aattgaagtt gaaatcaaat atccttaaac gcatcaccta
     1861 aataagacca aggttggcca caattgaagt tatgtaacgt ttcattagtc tgcgccaata
     1921 ttgaatgact gtgttagtag catttttgaa tgcattgtgt acacctttat aaacacttcc
     1981 gatattaact aacgagaacc actttaccgg tgcaacacat atgataaatt cagtacgaac
     2041 ataatatata
//
LOCUS       XR_011757450            1857 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842724), transcript variant X4, ncRNA.
ACCESSION   XR_011757450
VERSION     XR_011757450.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1857
                     /gene="LOC139842724"
                     /note="uncharacterized LOC139842724; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842724"
     ncRNA           1..1857
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842724"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /db_xref="GeneID:139842724"
ORIGIN      
        1 tctggcgatg tcatcgccca gggtttgatt catccctcaa aattaaaatt ggttccagaa
       61 tagtctaata ataatcacca ccatcgctca ctctggaatt cttaataacc ccagaaggtt
      121 atcgcgcctc tacatagcct ccatcacctc caatgcttcc atcgcctcca atgcttccat
      181 cgccgtcgcc atcaccgtat ccgtcgccat ccccgttgtc ttttctgcct gtacctctgt
      241 ccgtcgtagc taacgtgatc gtctcctccg tagtatatca gataaatctt tgcttcatta
      301 tgaataattt gtaaatttta gggttccaga tttttagatt aaattatctg ctcttttatt
      361 gatcggtttc atattttgat ttattgtatg tttgctttat ttttcgataa attttattat
      421 tgatttatgt aaccgtaaca gcatagcaag gttcgtattg tgtatggctg caagttggat
      481 tgaccaaaag ttatatttta atgattagtt aggctgctgg atagcttatt ttgagctcaa
      541 ggatcttcaa gtaagattca cttatcatta cgatatcatt aacacgcgta attttggttt
      601 attatattaa ttagtcggtg tttttatatg tgtaattaca aaatgtcatt ttagattaaa
      661 tgaataatga tttaatgatt ttagggcttc caatgatgat ggtatgatgg tcagttaaag
      721 gacatctttt ttaatttgag ttctttcttc gtattatcgt ttacttaaat gaatgcatat
      781 atatacataa catactaact ttttggtatt aatattcata tatatattag tgtacacatt
      841 tgatgccacc tttcaaaagc tgatcgcctt gaggtttaga agctttgtgg aagacgggtt
      901 tcgagtctgc aagttttgat tgagttttac gtattacttt acttaaaata catagcactt
      961 tgctttcttt gaaattatga ttattatgaa tataaggtca ctaattgtga acgtggtttg
     1021 attcctttgt ttgtttaatc aaagcccacc ttattttaat taagttgagt ttctgtaaca
     1081 gtactttgca gggagaccac caacgacgtc aatcgtcgtt gctctaacca ccactgtcgt
     1141 tgtttcagct cccgccttta actttttcat ttaccgtatg ttttttcccc aaaatgtgtt
     1201 tgttgatttt atcctctccg tcggttgttc cagggttagg ttaggtggtg ttttcttcac
     1261 caccgctcta gggtttcgtt ggtttaatcc ggatgattaa atacacatgc cttcttcttc
     1321 ttcatacagt cgttacagtc aacgataagg gattttgtag gtttgctgat tttggttaat
     1381 tgccgtgaat tgaaactcac tttaagccat cattataaca ggtgatagag ttccaccagc
     1441 ttacaaaaac aaacattatg ctctagccaa ctaactacag aatatgcaac ctgcatccaa
     1501 atattgcagc tgacacataa aagaaaggga aggtaatcgt ttaatgtcaa ctgctgaaat
     1561 tcaggccaaa attgacgatc tggattttga tttgtgttgc taaagcctag gttgtatgca
     1621 aagttgcaat tgaagttgaa atcaaatatc cttaaacgca tcacctaaat aagaccaagg
     1681 ttggccacaa ttgaagttat gtaacgtttc attagtctgc gccaatattg aatgactgtg
     1741 ttagtagcat ttttgaatgc attgtgtaca cctttataaa cacttccgat attaactaac
     1801 gagaaccact ttaccggtgc aacacatatg ataaattcag tacgaacata atatata
//
LOCUS       XM_071832836            1533 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842725), mRNA.
ACCESSION   XM_071832836
VERSION     XM_071832836.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1533
                     /gene="LOC139842725"
                     /note="uncharacterized LOC139842725; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842725"
     CDS             1..1533
                     /gene="LOC139842725"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688937.1"
                     /db_xref="GeneID:139842725"
                     /translation="MTSNEEPPRIPNSLLYYGIYCRALTTWTCSTQHRLLVMDLVVQR
                     RVTRRVRPVQPRILWKKLNEVNAETFKASVLERVEAGMDTVTQVNADQMWNSLATTIR
                     DVAKETLCVAVGTSRGHKSSRESWWISDEVQTKVALKQLRFRELIRCRDGTRDDRTRA
                     DERYKEANREAKKAVARAKDKAYEDLYRKLDSKEGANDIYRIAKARERRRRDIDITKF
                     IKDEAGQTIVKEEEIRKRWKGYFSSLFVGEGLGRQEDPQDLGIGQFRNNNFCRRISQG
                     EVRSALRKMGRNKAVGPDQIPIEAWRCLGDDGVREKQKGLEMVFLDLEKAYDSVPRKL
                     IWKTLNVRGIPSKYIRVIIDMYDGAKSCVRTPVGNTEYFSIEVGLHQGSALSPFLFAL
                     ILDELSQGIQENIPWCLIFADDIVLVSEQKDELNRRLERWREALEQNGLRISRQKTEY
                     LRCEFSRTEDELNVGGNISIGDQILQPQESFRYLGSVLHKSGRIDEGVTHCIKVRVLA
                     GM"
     misc_feature    <928..1464
                     /gene="LOC139842725"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(964..981,1141..1146,1231..1233,1237..1242,
                     1450..1455)
                     /gene="LOC139842725"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(964..981,1141..1143,1237..1239)
                     /gene="LOC139842725"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    1144..1146
                     /gene="LOC139842725"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgacatcca atgaggaacc gccacgtatc ccaaattcac tgttatatta tggcatttac
       61 tgtagagccc tgactacctg gacctgttcc acccaacacc gattattggt catggacttg
      121 gttgtgcaga ggcgggttac taggagagtg agacccgtcc aacctaggat cctttggaag
      181 aagctgaatg aagtgaatgc cgaaactttt aaagcgtcag ttttggaaag agtagaggca
      241 ggaatggata cggttactca agtgaacgca gatcagatgt ggaatagttt ggcaacaact
      301 attagagatg ttgccaagga aacattatgt gtggcagtag ggacatcgag aggacataag
      361 tctagtagag aatcatggtg gattagtgat gaggttcaaa ccaaagttgc gcttaagcaa
      421 ctgaggttta gggagctcat tagatgccgg gacgggacac gtgatgatag aactagggca
      481 gatgagaggt ataaagaagc caatagagaa gctaagaagg ccgttgcccg tgcaaaagat
      541 aaagcgtatg aagatttgta tagaaaacta gactctaaag aaggagcaaa tgatatttac
      601 aggattgcaa aagcgaggga gcgtaggagg agggatatag atatcaccaa gtttatcaag
      661 gatgaagccg gtcaaaccat agtgaaggaa gaagaaatta ggaaaagatg gaaagggtat
      721 ttctcatctc ttttcgtggg tgaaggactc gggcgccaag aggatccaca ggacttggga
      781 ataggacaat tccggaacaa caacttctgt aggagaatca gtcagggaga agtaagatcg
      841 gcactacgaa aaatgggtag aaacaaagct gtaggaccgg accaaattcc aatagaggcg
      901 tggcggtgcc ttggcgacga tggtgtcagg gagaaacaaa agggtctaga gatggtcttc
      961 ttagacttag aaaaggccta tgatagcgta ccgcgaaagc tgatttggaa gacccttaat
     1021 gttaggggta tcccaagtaa gtatattaga gttattatag atatgtacga tggggcgaag
     1081 tcctgtgtta ggacgcctgt gggaaacaca gagtatttct cgatagaagt aggcttgcat
     1141 cagggatcag cccttagtcc tttccttttc gctttgatcc tcgacgaact gtctcaagga
     1201 atacaagaga acatcccttg gtgtctgatt tttgccgatg atatcgtgct tgtatcggaa
     1261 caaaaggatg aacttaatag aagactagaa cgatggaggg aggccttaga acaaaatggg
     1321 ctacggatca gtagacaaaa gacggaatat ctaaggtgcg aattcagtag gactgaggat
     1381 gaactaaatg ttggagggaa tatcagcatt ggggaccaga tcttgcaacc acaagagtcg
     1441 tttagatatc taggttcggt cctccacaaa tcagggagga tagacgaggg cgtgactcat
     1501 tgtattaagg tacgtgttct tgcaggtatg tag
//
LOCUS       XM_071832837             549 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842727), mRNA.
ACCESSION   XM_071832837
VERSION     XM_071832837.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..549
                     /gene="LOC139842727"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842727"
     CDS             1..549
                     /gene="LOC139842727"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688938.1"
                     /db_xref="GeneID:139842727"
                     /translation="MEQPLGFIDSRFPSHVCRLKKALYGLKQAPRAWFQRLSTFLTQL
                     GFVCSRADPSLFVYKKGTCLAYLLVYVDDLILTGINQVSQFLQAPTIDHFQAVKRIIR
                     YIKGTIVYGLHFQCAVQPYLVGYSDADWARCIETGCSTYGYSIFLGGKLVSWSAKKQP
                     TVARSSCESEYRALANTAAEII"
     misc_feature    <1..>240
                     /gene="LOC139842727"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    367..>546
                     /gene="LOC139842727"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggagcaac ctctggggtt tatagactct cggtttcctt cccatgtttg tcggttaaag
       61 aaagcgttgt atggtttaaa acaggcgcct cgtgcttggt ttcaacgact tagtacgttt
      121 ctcacacaac ttggctttgt gtgcagtcga gctgaccctt cactcttcgt ctataaaaag
      181 ggtacatgtc ttgcctatct cctagtttat gttgatgatc ttatccttac aggcataaat
      241 caagtaagtc agtttcttca ggctcctacg attgatcatt ttcaagcagt caaacgtatt
      301 attcgctata tcaaaggcac catcgtctat ggtctgcatt ttcagtgtgc tgtccaacct
      361 tatttagttg gttattctga tgctgattgg gcacgttgta ttgaaacagg atgttcaacc
      421 tatggttatt ctattttcct tggaggcaaa cttgtatcat ggagcgcaaa gaaacaaccg
      481 acagttgcta ggtcaagttg tgaatccgaa tatcgtgcct tggctaatac tgctgctgaa
      541 ataatttag
//
LOCUS       XM_071832839            1449 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides squalene monooxygenase
            SE1-like (LOC139842728), mRNA.
ACCESSION   XM_071832839
VERSION     XM_071832839.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1449
                     /gene="LOC139842728"
                     /note="squalene monooxygenase SE1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 59 Proteins"
                     /db_xref="GeneID:139842728"
     CDS             1..1449
                     /gene="LOC139842728"
                     /codon_start=1
                     /product="squalene monooxygenase SE1-like"
                     /protein_id="XP_071688940.1"
                     /db_xref="GeneID:139842728"
                     /translation="MLKTCRKLKDTWRKCVNDFNHDAVVVDTDVIIVGAGVVAAALAY
                     TLAKDGRHVHLIERDLTEQDRLVDEVLHPGGYLKLLELDLADCVEEIEAQRVSGYAIY
                     LNDKNIRLDYPLENFPFRVCGKSFHNGRFVQRMRNKASSLSNVKIEQGTVTSLLKKQG
                     TVQGVHYKTKNGHERSANAPLTVVCDGCVSNLRRDLCNSKIEVPSCFVALVLENTRLA
                     YPNHAHVVLADPSIVLLYSISNTEIRCIVDIPSEKVPSISNGEMAKYLKNVVAPKIPH
                     ELSNAFIAAIDRGNIRTMPNRTMSADAKITAGAILLGDAFNMRHPLTGGGMTAALSDI
                     VLLRDILRPLNDLNDTYKDLQRFYILRKPMSFTLNMFASVVYNVFRESQDPARRELRS
                     ACFDYLSLGCLFADGPMSIFSALDQRPLALLCPCIAFGVYSVGRLLTPFPSPRRSWLA
                     IRLITVGLEIIHSVFRSEGVMQLVLFPSLIPA"
     misc_feature    124..1434
                     /gene="LOC139842728"
                     /note="squalene monooxygenase; Region: PLN02985"
                     /db_xref="CDD:178566"
ORIGIN      
        1 atgttgaaaa catgtcggaa attgaaggac acttggcgga aatgcgttaa cgacttcaac
       61 catgatgcag tcgttgttga taccgatgtc atcatagttg gtgccggtgt tgttgctgct
      121 gctcttgcct atactcttgc aaaagacgga cgtcatgtgc atctcattga aagggacttg
      181 acggagcaag atcgacttgt ggatgaggtt ttacatccag gaggctactt aaagttgcta
      241 gagttagatc ttgcagattg tgtcgaagaa attgaagctc aacgtgtttc tggttacgcc
      301 atttatttga acgataaaaa cattagactc gattatcctt tagagaactt cccctttagg
      361 gtatgcggaa aaagctttca caatgggcgg tttgttcaac gtatgagaaa caaagcttcg
      421 tctctttcaa atgtaaaaat agaacagggg acagtaactt cattgcttaa aaaacaagga
      481 accgtgcaag gagttcatta caaaactaaa aatggccatg aaaggagtgc aaacgcgcct
      541 cttaccgttg tttgcgatgg ttgtgtttct aatctacgac gcgatctttg caactctaag
      601 atagaagtac cttcttgttt cgtcgcatta gttttggaaa acactcgtct agcttatcca
      661 aaccatgcac acgttgtact cgcagaccct tcaatcgtac tcttatattc gattagtaac
      721 actgagattc gttgtatagt cgatatccct agtgaaaagg ttccttcaat ttcaaatggt
      781 gaaatggcaa agtatcttaa aaatgtagtg gctccaaaga tcccgcacga gctatctaac
      841 gcgtttatag cagcaattga tagaggaaat ataagaacaa tgccaaatag aaccatgtcg
      901 gctgatgcaa aaatcactgc aggtgcgatt ttattgggtg acgcatttaa tatgcgtcac
      961 ccattaactg gaggtgggat gactgctgca ttatcagata ttgttttgct tcgtgacatt
     1021 cttagaccat taaatgatct aaacgatacg tataaagatc ttcaacgctt ctacattctt
     1081 cgaaagccga tgtcatttac gctaaacatg tttgctagtg tcgtctataa tgtattccgt
     1141 gaatcacaag atccggcgag aagagagcta cgcagtgcgt gttttgatta tttgagcctt
     1201 ggttgcttgt ttgccgatgg accaatgtct atattttcgg cacttgatca acgtccactt
     1261 gctcttttat gcccgtgcat cgcatttggt gtgtatagtg ttggccgctt gcttacacca
     1321 ttcccttcac caagacggtc atggcttgcg atcagactca tcacagttgg tcttgaaatc
     1381 atccactcgg tttttcgtag cgaaggagtt atgcaactcg tgttgttccc ctcactaatt
     1441 cccgcatag
//
LOCUS       XM_071832840             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842729), mRNA.
ACCESSION   XM_071832840
VERSION     XM_071832840.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139842729"
                     /note="uncharacterized LOC139842729; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842729"
     CDS             1..501
                     /gene="LOC139842729"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688941.1"
                     /db_xref="GeneID:139842729"
                     /translation="MADSKIHPAITINNIKNFIPITLEMEKSQSSFWAGLFQIHCLAY
                     EVLDHIIPSTDSSSTVSSSSDQTDKSPDKSKASWDRLDPIVLQWIYGTISHDLLRTIF
                     KPDSTAQQACERLWNMFHDNQNSRAVHLTHQFTNTRIENFSNASDYCQELKVLADQLA
                     NVGQKV"
     misc_feature    262..>498
                     /gene="LOC139842729"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggcagatt ctaaaattca tccagctatt accatcaaca acatcaaaaa ctttattccc
       61 atcactctcg agatggagaa aagtcaatcc tctttctggg ccggtctctt tcaaatccat
      121 tgtctagctt atgaagttct ggatcacatc attccatcaa ctgattcatc atctacggtc
      181 tcttcttctt ctgatcaaac cgataagtca cctgataaaa gtaaagcttc atgggatcga
      241 ttggatccta ttgttttaca atggatctac gggactattt cacacgatct tctgcgcacc
      301 atattcaaac ctgattccac cgctcagcag gcatgtgaac gtctatggaa catgtttcat
      361 gacaatcaaa actctagggc tgttcattta acacaccagt tcacaaatac ccgcatcgag
      421 aacttctcga atgcttctga ttactgtcaa gagttgaagg tgttagccga tcaacttgct
      481 aatgtcggcc aaaaagttta a
//
LOCUS       XM_071832841            1853 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842730), mRNA.
ACCESSION   XM_071832841
VERSION     XM_071832841.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1853
                     /gene="LOC139842730"
                     /note="uncharacterized LOC139842730; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842730"
     CDS             1..1725
                     /gene="LOC139842730"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688942.1"
                     /db_xref="GeneID:139842730"
                     /translation="MEDQKLQSEPPAEVVVIDARIKDGEDEEFYEKIEAPKFVDFTKP
                     YTVRIDDRFWFCSRVGCDQKHEEELNHEEISKNFVLRVMAARSPNIKLRKALNREHLS
                     MKCPLSAPAKPSKSRMPRLDMVSSLISHKNGDPESKIKPSSKVGSTPMANKSRQVASK
                     YMTTPRNKMCRPDLDSFRSVQHPKKTTIYVNNRTIAKALAFYSPKKAIRVKKSVELHT
                     PLKNICNGTKRLEIASQKKTSKGTQNKPKKQENEDASRSHLKVCKSAKKSKALVPSNA
                     SNSHALRGDTKDSTIVDDKKNVGCDEKSSNEVVAGQMDDDVKEDALNLEDKENMGSAE
                     VAEHMNDDGKENALIRQNSNRSGNQPLGDKIISKEMHKKNKVVQTSGPVGMKCKKPKP
                     TNVKPFRLRTDERGILREAIVEKKLHDNAPEKEVLKDTSIIIKRTYRVPKSDNVTTKQ
                     RKHNDSTKVKCEKEPSAVGSKPVTNRAQKRPESTQQRLRLTTSLRTKSPQGGVSPKKV
                     RMQGQQLGVIKEKSCKLTTDVMVTENKTRPGSAARSTSRGKRPLTIAKEPNFHTSHTP
                     KTCSKISR"
ORIGIN      
        1 atggaagacc aaaagcttca gtcggaacca ccggcggagg tagtggtgat cgacgccaga
       61 atcaaagacg gtgaggatga agagttttat gaaaaaatcg aagctccaaa gtttgtggat
      121 tttactaaac cctacactgt gcgtatcgat gatcgattct ggttctgctc tcgtgttggt
      181 tgtgatcaaa agcatgagga ggaactaaac catgaagaga tctccaaaaa cttcgtgctt
      241 cgggtcatgg ctgcaagaag tccgaatatt aagctaagaa aagcgttaaa tagggaacac
      301 ttaagtatga aatgtccact ttctgctcct gcaaaaccgt ccaagtctag gatgcctaga
      361 ttagacatgg tttcttcttt gatttctcac aaaaatggtg acccagaaag caaaattaaa
      421 cctagttcaa aagttggttc caccccaatg gctaataaat ctaggcaagt tgcttccaag
      481 tatatgacaa caccgagaaa caaaatgtgt cgacccgatc ttgactcctt cagaagtgtt
      541 cagcatccta aaaaaacaac tatttatgtg aacaatcgaa caatagcaaa ggctctagct
      601 ttttactccc ccaagaaggc cattcgtgtt aaaaagtccg ttgagttgca tacacccctg
      661 aaaaatattt gtaatgggac aaaaaggctt gagatagcta gtcaaaagaa gacttcaaag
      721 ggtacccaaa acaagcccaa gaaacaagaa aacgaagatg cctcgagaag ccatttaaag
      781 gtttgcaaga gtgcaaaaaa gtccaaagct ttggtaccgt ccaacgcttc aaattcacat
      841 gctttgagag gtgacactaa ggattcgaca attgtagacg acaaaaagaa tgtgggatgt
      901 gatgaaaaat catcaaatga agtggtagca ggacaaatgg atgatgatgt taaagaagat
      961 gctttgaatc ttgaagataa agagaatatg ggaagtgctg aggtggcaga acacatgaat
     1021 gatgacggta aagaaaatgc tttgattcgt caaaatagta acagatctgg caaccagcca
     1081 ttgggtgata agattataag taaggagatg cataaaaaga acaaggttgt tcaaacttct
     1141 ggtcctgtcg gtatgaaatg caaaaagcca aagcctacaa acgtcaaacc atttaggcta
     1201 agaactgatg aaagagggat tcttagagaa gctattgttg agaaaaagct ccatgataat
     1261 gctcctgaaa aagaggtttt gaaagataca agtataataa taaagaggac gtatcgggtt
     1321 ccaaaaagtg ataacgttac taccaaacaa aggaagcaca acgattctac aaaagttaaa
     1381 tgtgaaaaag aaccaagtgc agtgggatca aaaccagtaa ctaatagagc acaaaaacgc
     1441 cctgaatcaa cacaacaaag acttcgactt acgaccagct taaggacaaa atcacctcaa
     1501 gggggtgtgt cacctaaaaa agtaaggatg caaggccagc aactgggtgt aataaaagag
     1561 aaatcttgta agttaacaac tgacgttatg gtgacggaga acaaaactag accgggttct
     1621 gctgcaagat ccacatcacg tggaaaacgt ccgttgacca ttgctaaaga accaaacttt
     1681 cacacttcac atacaccaaa aacttgctca aagataagca ggtaactgct taagtgggaa
     1741 gtttgtgttg tgtaaaagat tcaggcaatc attcattgaa tttcctttat tcagttatgt
     1801 tgctacaaat tttgtagcca tttatttatt tatttataat atgtttaact tgt
//
LOCUS       XM_071832842             531 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842732), mRNA.
ACCESSION   XM_071832842
VERSION     XM_071832842.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..531
                     /gene="LOC139842732"
                     /note="uncharacterized LOC139842732; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842732"
     CDS             49..531
                     /gene="LOC139842732"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688943.1"
                     /db_xref="GeneID:139842732"
                     /translation="MDDCSKNKRPFRTLHPTDVESGCQWWIKSCQYFDGTEVDEEVEE
                     HVEDELQDQEHGGGEQSQSQSQSQSQSQSQSQSQSQTNLSTDAKELYNSLVKRMDRQE
                     KELQECRKQINDHEKRISEQEKRLSEQEQHQDEELLGRSFSDNENDKSAQRIRRGMRD
                     "
ORIGIN      
        1 tcggctgagt ctttttcagt cactgattac ctgcatctac taaacgttat ggatgattgt
       61 tcgaagaata aacgaccttt tcgtactctg catcccactg atgttgagag tggatgtcaa
      121 tggtggataa aaagttgcca atactttgat gggacggaag ttgatgagga agttgaagaa
      181 catgttgaag atgaactgca agatcaggaa catggtggtg gagaacagtc tcaatctcaa
      241 tctcaatctc aatctcaatc tcaatcacag tctcaatctc agtctcaaac aaacttatct
      301 actgatgcaa aggaattata caattctttg gtgaaacgga tggataggca agaaaaagag
      361 ctgcaagagt gtagaaaaca aataaatgat cacgagaaac gtatatctga acaagagaaa
      421 cgattatcag aacaagagca acatcaagat gaggagttac ttggtcgatc cttctcagac
      481 aatgaaaacg acaaatcagc tcaacggatt agacgtggaa tgagagattg a
//
LOCUS       XM_071832843            2715 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842734), mRNA.
ACCESSION   XM_071832843
VERSION     XM_071832843.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2715
                     /gene="LOC139842734"
                     /note="uncharacterized LOC139842734; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842734"
     CDS             1..2715
                     /gene="LOC139842734"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688944.1"
                     /db_xref="GeneID:139842734"
                     /translation="MAEQGAITLINKLDFSDPLYLHASDTTTALGTKNKLGFINGTFQ
                     RHATDATLQNQWDRCNSVVLSWILGSNSDELYSGQIFSTNATHVLNELKETYNKIDGS
                     IIYNLHHKINSIKQNENSLSDYYHSLNSLWKQYDCMITGPACTCGNVCNCPASEFVKE
                     QNKVQKLMQFLMGLNDCYMSVRSNILLRDPLPDVKSAYAILSREESHRNINLKENVIT
                     KPQTSAFIAQTSNKDMNSNNSSSRFNNRRGPNQNLKCKKCNKLGHTIDRCFEIVGYPP
                     GYKRNFNNNNNSYKPNQGYQSQNNFKSVSNNTTASKEASTSSSSLSFSNEQMMKLLSL
                     INETPESSTQSNMAGTFFNCSVKFNANFNKYFNALNSQSENVFKGWVIDSGANKHMTL
                     SEKGLFNLVNVSDLKLTVGHPNGTQALIKSIGNLKINDHTTLFDVLVVPEYCVSLMSV
                     YKLSKDNKLSVRFDDKRCYIQDLKNLKIKGIGKQDGGLYVFDDTHGCSFTANNCVSNC
                     YASCKLWNARLGHPSDQVLNIFKNKLSLKGDLNTEPCEICHKAKKTRLPFSLSEQKTT
                     SLGDLIHLDLWSPFKIQSKEGFKYFLTIVDDYSRAVWIYMLKSKEDVYDNVFSFVQLI
                     ENQFSKKVKIIRSDNGTKFLNNKMADFIKTKGIIHQTTCAYTPQQNGVVERKHRNLLN
                     VARALMFQGRLPLNMWSDCVLTACYLINRTPTAVLNGKSPYELIFKTEPNLSYIKCFG
                     CLCFSTVLNPSDKFSSRSDKSVLIGFSSKISVDEQNDIDLQKTNFFDKMFLSTNDTSS
                     PYDEESSDNANEHSPTATHDSEQNSHSEGNSHVLQNINSFDNLRRSTRSTIFPKKFDD
                     FVVDDKVKYSINRVVNYSNLNSENLCFVSNLNKSFEPKNYEEAVKDKN"
     misc_feature    1459..1656
                     /gene="LOC139842734"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    1705..2001
                     /gene="LOC139842734"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atggctgaac aaggtgctat tactttgatt aataaacttg attttagtga tcctttgtat
       61 cttcatgcaa gtgatacaac tactgctttg ggtactaaaa ataaacttgg ttttattaat
      121 ggaacttttc aaaggcatgc tactgatgct actcttcaaa atcaatggga taggtgtaat
      181 agtgttgttc tttcatggat acttggatca aattctgatg agctttattc tggtcaaatt
      241 ttttctacta atgctactca tgtattgaat gaattaaaag aaacttacaa caagatagat
      301 ggttcaatca tttataatct gcatcataag ataaattcta tcaaacaaaa tgaaaacagt
      361 ttatctgatt attatcacag tttgaatagt ttatggaaac aatatgactg tatgataact
      421 ggtcctgctt gtacttgtgg taatgtttgt aattgtcctg ctagtgagtt tgttaaggaa
      481 caaaataagg ttcaaaagct aatgcaattt ttaatgggtt taaatgattg ctatatgtct
      541 gttagaagta atattttgtt gagggatccc ttgcctgatg tgaaaagtgc ttatgctatt
      601 ttgtctaggg aagaatcaca tagaaatata aatctaaaag aaaatgtgat tactaaacct
      661 caaacatctg cttttattgc tcaaacttct aacaaagata tgaattctaa taatagcagt
      721 tcaagattta ataatagaag aggaccaaat cagaatctaa aatgtaaaaa atgcaataaa
      781 cttggtcata ccattgatag atgttttgaa attgttggat atcctcctgg atataagaga
      841 aactttaaca ataataataa cagctataag ccaaatcaag gatatcaatc tcaaaacaat
      901 tttaaaagtg tttctaacaa tactacagct tctaaagaag ctagtacaag ttcttcttct
      961 ctttctttct caaatgaaca gatgatgaag cttttaagcc ttataaatga aacacctgaa
     1021 tctagtactc agtctaatat ggcaggtact ttctttaatt gcagtgtaaa gtttaatgca
     1081 aattttaata aatactttaa tgctcttaat tctcaatctg aaaatgtttt taagggttgg
     1141 gttattgatt ctggtgctaa taaacacatg acactttctg aaaaaggctt attcaatttg
     1201 gtaaatgttt cagacttaaa gctaactgtt ggacatccaa atggtactca agcattaatt
     1261 aaaagtattg gaaacttaaa aattaatgat cataccacac tttttgatgt tcttgttgtg
     1321 cctgaatatt gtgttagctt aatgtctgta tacaaattat caaaagataa taaattgagt
     1381 gttagatttg atgataaaag atgttatatt caggatttga agaacttgaa aataaaaggg
     1441 attggtaaac aggatggtgg attatatgtt tttgatgata ctcatggttg ttcttttact
     1501 gctaataatt gtgtgagtaa ttgttatgca tcttgtaaat tatggaatgc taggttaggt
     1561 catccttcag atcaagttct taatattttt aaaaataaac tttctttaaa aggagattta
     1621 aatactgaac cttgtgaaat ctgccataag gctaaaaaaa ctagactacc tttttcatta
     1681 agtgaacaaa aaaccacaag tcttggtgat ttaattcatt tagatttgtg gagtcctttc
     1741 aaaattcaaa gtaaagaagg tttcaagtat ttcttaacta ttgttgatga ttactctaga
     1801 gctgtttgga tttatatgct taaaagtaaa gaggatgtgt atgacaatgt gttcagtttt
     1861 gttcaactaa ttgaaaatca attttcaaag aaagttaaga tcataagatc tgataatggt
     1921 actaaatttc tgaataataa aatggctgat tttattaaaa caaaaggtat tattcatcag
     1981 actacttgtg catacacacc tcaacaaaat ggtgttgttg aaaggaaaca taggaacttg
     2041 ttaaatgttg caagagcctt aatgtttcag gggagattac ctttaaatat gtggtctgat
     2101 tgtgtgctaa ctgcttgcta tttgattaat aggactccca ctgctgtgct gaatggaaaa
     2161 tctccttatg aacttatttt taaaactgaa cctaacctct cttatattaa gtgctttggt
     2221 tgcttgtgtt tttctactgt tcttaatcct tctgataaat ttagtagcag atctgataaa
     2281 agtgttttga ttggtttttc cagtaaaatt tctgttgatg aacaaaatga cattgattta
     2341 caaaagacaa atttctttga taaaatgttt ttaagcacca atgacacttc aagtccctat
     2401 gatgaagaga gtagtgataa tgctaatgag catagtccta cagcaactca tgatagtgaa
     2461 caaaattctc attctgaggg caattctcat gttttacaaa acattaattc ttttgataac
     2521 ctaaggagat ctaccagaag cacaatattt cctaagaagt ttgatgattt tgttgttgat
     2581 gataaagtta aatatagtat taatagagtt gtaaattact ctaatctgaa ttctgagaat
     2641 ttgtgctttg tttctaattt gaataaaagt tttgaaccta aaaattatga agaagctgtt
     2701 aaagataaaa attag
//
LOCUS       XM_071832845             489 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pathogenesis-related protein
            1A-like (LOC139842735), mRNA.
ACCESSION   XM_071832845
VERSION     XM_071832845.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..489
                     /gene="LOC139842735"
                     /note="pathogenesis-related protein 1A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 44 Proteins"
                     /db_xref="GeneID:139842735"
     CDS             1..489
                     /gene="LOC139842735"
                     /codon_start=1
                     /product="pathogenesis-related protein 1A-like"
                     /protein_id="XP_071688946.1"
                     /db_xref="GeneID:139842735"
                     /translation="MDLLARLKSLSFFLLIFSYFIHFCRSASIYDFIVPHNEARAQVG
                     VQPLKWNETLASYASLYAYQRLGDCKLQHSQGPFGENLAEGYGDEFTATDAVNLWVNE
                     KQYYEYDTNSCVGDQCLHYTQVVWRDTTHVGCARVKCYNNWMFVICSYDPPGNYEGER
                     PY"
     misc_feature    91..486
                     /gene="LOC139842735"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain of
                     pathogenesis-related protein 1 (PR-1) family proteins;
                     Region: CAP_PR-1; cd05381"
                     /db_xref="CDD:349400"
ORIGIN      
        1 atggatctac ttgctagact caaatcccta tccttttttc tcttaatctt ctcatacttc
       61 atacatttct gtcgttcagc ctcaatctac gacttcatcg taccacacaa tgaagctcga
      121 gcccaagtcg gtgtacaacc actcaaatgg aacgagacat tagcatcata tgctagtctg
      181 tacgcttacc aacgacttgg agactgtaag ttgcaacact cacaaggacc ttttggtgaa
      241 aacttagccg aaggttatgg tgacgaattc actgcaaccg atgctgttaa cttgtgggtt
      301 aacgaaaaac aatattatga atacgacaca aattcgtgtg taggtgatca atgtcttcat
      361 tatacacaag tggtgtggcg tgatacaact catgttggtt gtgctagagt taaatgttat
      421 aataattgga tgtttgttat atgtagctac gatccaccag ggaattatga gggcgaacgg
      481 ccttattga
//
LOCUS       XM_071832846            1299 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842736), mRNA.
ACCESSION   XM_071832846
VERSION     XM_071832846.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1299
                     /gene="LOC139842736"
                     /note="uncharacterized LOC139842736; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842736"
     CDS             1..1299
                     /gene="LOC139842736"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688947.1"
                     /db_xref="GeneID:139842736"
                     /translation="MILTSPSGEEHAYVLRFNFDVTNNEAEYEALLAGLNIALKLNIT
                     KLRAYVDSQLVSNQFNGSFDAHELSMQKSQNKKADALSKLAALTFSHFQKQVWVEELP
                     SKAINGSLVIAAIAEEQPNWMNPIINNLHNNVLPEDKVEARLVRIRSPMYTIENDTLY
                     CKSYNGPLMRCVGPAEAEMIMKEVHSGFCAFHSGYKTIASKIMRLGYFWPTLYRDVAK
                     IMKRCKSCQRHAPQNRRSRHDMIPVNLPWPFYKWAIDIVGPFPAGAGNVKFLIVEIDY
                     FTKWVEAKALCTITGVQRLNEKRTRWFDELSNVLWANRTTFKKSTDETPFSLVYGSEA
                     MIPAEIFVPTHRVTNFDETANKDALCENLNFVEERKLMAAIREANNKQQIAKYYNKKV
                     RALAFDVGEWVLRNNEASRAKNVSKLGPNWEGMTPHQKSL"
     misc_feature    4..258
                     /gene="LOC139842736"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    514..696
                     /gene="LOC139842736"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgattctga caagtccaag tggtgaagag catgcatatg tgctgcggtt caattttgat
       61 gttaccaata atgaagctga atatgaggcg ctgttggctg ggttgaacat tgcgcttaaa
      121 ctaaacatca ctaagttgcg tgcatatgtt gattcgcagt tagtctccaa tcagttcaat
      181 ggatcctttg atgcgcatga gctctccatg caaaagagcc aaaacaaaaa ggcagatgca
      241 ttaagcaagc ttgcagcctt aactttttca cattttcaaa agcaagtttg ggtagaggaa
      301 ttgcctagca aagcaatcaa tggcagttta gttatcgcgg cgattgcgga ggaacaacca
      361 aattggatga atccaattat taacaatcta cacaataacg tactaccaga agataaagtt
      421 gaggcaagat tagtgcgtat aaggtcgcct atgtacacca ttgaaaatga taccttgtat
      481 tgcaaatcat ataatgggcc attaatgcgt tgtgttggcc ccgcagaggc tgagatgatt
      541 atgaaagagg ttcatagtgg tttttgtgcg tttcattcag gttataaaac tattgcgtcc
      601 aagatcatgc ggttgggcta cttttggcca accctatatc gcgatgtggc aaaaataatg
      661 aaaagatgca aaagttgtca aagacatgca ccgcagaaca ggagatcaag gcatgatatg
      721 ataccagtaa atttgccttg gccattctat aagtgggcga tcgatattgt agggccgttt
      781 cctgcaggtg caggaaatgt gaagttcttg atcgtagaaa tcgattattt taccaaatgg
      841 gtagaggcaa aagcattgtg cacaatcaca ggagtgcaac gcttaaatga aaagcgaaca
      901 agatggtttg atgaactatc caatgtgctg tgggcaaatc gcacaacatt taagaaaagt
      961 actgacgaaa caccttttag tctagtgtat ggttcggagg caatgatccc cgcagaaatt
     1021 tttgtgccaa cacatagggt taccaatttt gatgaaacag caaacaaaga tgctttgtgc
     1081 gaaaatttga attttgtgga ggaacgcaaa ttaatggctg caataagaga agcaaataat
     1141 aaacaacaaa ttgcgaagta ttataacaag aaggtgcgtg ctctagcctt tgatgttggc
     1201 gagtgggttt tgcgtaataa tgaggcaagt cgcgcaaaaa atgttagtaa attgggtcca
     1261 aattgggaag gtatgacacc ccatcaaaaa tccctttaa
//
LOCUS       XM_071832847             662 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pathogenesis-related protein
            1-like (LOC139842737), mRNA.
ACCESSION   XM_071832847
VERSION     XM_071832847.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..662
                     /gene="LOC139842737"
                     /note="pathogenesis-related protein 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842737"
     CDS             1..498
                     /gene="LOC139842737"
                     /codon_start=1
                     /product="pathogenesis-related protein 1-like"
                     /protein_id="XP_071688948.1"
                     /db_xref="GeneID:139842737"
                     /translation="MYQLIYKLSLVCVIFISILQFCHSNDEQNTPEDFLNAHNKYRDE
                     VGAPPLRWCQSIAKFAEYYANQRKNDCALQHSHNDKYGENLATGYGGFSAVHAVKLWV
                     NQKVNYDYKANTCAAFKHCGYYTQVVWKNSTKLGCARVKCTNGARFITCNYDPKGNVK
                     KERPF"
     misc_feature    91..495
                     /gene="LOC139842737"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain of
                     pathogenesis-related protein 1 (PR-1) family proteins;
                     Region: CAP_PR-1; cd05381"
                     /db_xref="CDD:349400"
ORIGIN      
        1 atgtatcagt taatttacaa attgtcactt gtttgtgtta tattcatatc aatattacaa
       61 ttctgtcatt ccaatgatga acaaaataca ccagaggact ttttgaacgc ccacaataag
      121 tacagagatg aggtgggtgc gccacctctg agatggtgtc aatcaatagc taaatttgcg
      181 gagtactacg ctaatcaaag gaagaacgat tgtgcacttc aacactcgca taacgataaa
      241 tatggtgaga atctcgccac ggggtatggg ggcttctcag ctgtacacgc ggtcaagttg
      301 tgggttaatc agaaggttaa ttacgattat aaggcgaata cttgtgcagc gttcaagcat
      361 tgcggatatt atacgcaagt ggtttggaaa aactcgacca aacttgggtg tgctagggtc
      421 aaatgcacga atggtgcacg ctttattacg tgcaattacg accccaaagg gaacgtcaaa
      481 aaagagagac ctttctagga tcatatcgga cacatgggca cgctatagtt tgttcctatt
      541 agacagattc ggttaggtta aacttaagcc cggacttaac ctaatctaat ctttacaata
      601 gtccaactga tcgatataga attatgtata taatatatgt actactgtgt cattttttaa
      661 ta
//
LOCUS       XM_071832848            1255 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842738), mRNA.
ACCESSION   XM_071832848
VERSION     XM_071832848.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1255
                     /gene="LOC139842738"
                     /note="uncharacterized LOC139842738; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842738"
     CDS             268..1098
                     /gene="LOC139842738"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688949.1"
                     /db_xref="GeneID:139842738"
                     /translation="MEGRNMDYAVSAYETISDHATLSNQILWLSAVFGGIIMCKTVYE
                     LTGIISPLVYEGFIKLDKKKKLEWKNRGFSTFHAMFAAIGSLYFLVISNLFDEHGQKE
                     LIINRSSVSSDTLLGISIGYFLSDFAMIVWTYPTLGGAEYFWHHGLSLFAIVQSLISG
                     QVQFYILIVLFTEITTPFVNLRWYLDVASKKNSTLYMLNGIAMFVGWLVARIILFIYL
                     FYHLYTHFDQVKLVYYPLGFYTLLTIPSALALMNLFWFWKIAKGMVKTLTKLTKPHTG
                     "
     misc_feature    454..1071
                     /gene="LOC139842738"
                     /note="TRAM, LAG1 and CLN8 homology domains; Region: TLC;
                     smart00724"
                     /db_xref="CDD:214789"
     polyA_site      1255
                     /gene="LOC139842738"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccttcaagtt ttttttatcc acatcatcac cccagtttaa aactatttca tatacatata
       61 cattatttat ttatgaacta aataaaataa tttccgtttg taagtacaat ctttatatga
      121 gcaagcaata atttaaaatc tacttcctgg cgttatcaat tacccgatta caatcttcat
      181 aactcaggga ttattagctt tttccaccta taacgtttac tttttgtacc tattcacaca
      241 cccgaatttt tgcaagcaaa aagaattatg gaaggaagaa atatggatta tgctgtttct
      301 gcttatgaga ctatttctga tcatgctact ttaagtaacc aaatcttgtg gttgtctgct
      361 gtttttggag gaattattat gtgtaaaact gtttatgaat tgacgggcat aattagcccc
      421 ttggtctatg aaggatttat taaacttgat aaaaagaaga aacttgaatg gaaaaatcgg
      481 ggcttttcga cgttccatgc aatgtttgct gccattggtt ctctgtactt tttggtcatt
      541 tcaaatcttt ttgacgaaca cggccaaaaa gaattgatta tcaatcgatc ttctgtatca
      601 tccgacactc tacttgggat atccattggc tatttcttgt cagatttcgc gatgattgta
      661 tggacatatc cgactttagg tggtgctgaa tacttttggc accatgggct atcgttgttc
      721 gccattgttc aatccctcat aagtggtcaa gttcagtttt atatccttat tgttcttttt
      781 acggagatca cgactccttt tgtgaatcta agatggtatc tggatgttgc cagtaagaag
      841 aactccaccc tttacatgtt aaatggcatt gcaatgttcg tagggtggtt ggttgctagg
      901 atcattttgt tcatctacct tttctaccat ctctatacac attttgatca ggtgaagcta
      961 gtttattatc cattgggatt ttacactttg ttgacaatcc catcagcatt ggcgttgatg
     1021 aatttgtttt ggttttggaa gattgcaaaa gggatggtta aaactctcac caagttaaca
     1081 aagcctcata ctggttaaat tctttttcat gtactccggt cgttatatat atttaaccat
     1141 catgcctact ttttcgtcac aaattatact gcctgtttgc aaaaatgcaa tctttgctaa
     1201 cgtcaacgat tttaataaca gaaatgggtt caggttatat attgtttttg ctgca
//
LOCUS       XM_071832849             498 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pathogenesis-related protein
            PR-1 type-like (LOC139842739), mRNA.
ACCESSION   XM_071832849
VERSION     XM_071832849.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..498
                     /gene="LOC139842739"
                     /note="pathogenesis-related protein PR-1 type-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139842739"
     CDS             1..498
                     /gene="LOC139842739"
                     /codon_start=1
                     /product="pathogenesis-related protein PR-1 type-like"
                     /protein_id="XP_071688950.1"
                     /db_xref="GeneID:139842739"
                     /translation="MYQLIYKFSVVCVIFISILQLCHSNDEQNTPEDFVNAHNKFREE
                     VGVGPMTWCPSIAKFAEYYANQRKNDCAVEHSGTDKYGENIAMGYGGFSAEHAVKLWV
                     NQKLNYDYKANSCAMFKACGYYTQVVWKNSTKLGCARVKCLNGARFITCNYDPKGNVP
                     KEKPY"
     misc_feature    91..495
                     /gene="LOC139842739"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain of
                     pathogenesis-related protein 1 (PR-1) family proteins;
                     Region: CAP_PR-1; cd05381"
                     /db_xref="CDD:349400"
ORIGIN      
        1 atgtaccaat taatttacaa attttcagtt gtttgtgtta tattcatatc aatattacaa
       61 ttatgtcatt ctaatgatga acaaaataca ccagaagact ttgtgaacgc tcataataag
      121 ttcagagaag aggtgggtgt ggggcccatg acatggtgtc catcaatagc taaatttgcg
      181 gagtactacg ctaatcaaag gaagaacgat tgtgcagttg aacactcagg taccgataaa
      241 tatggcgaga acatcgcaat gggttatggg ggcttctcag ctgagcacgc ggtcaagttg
      301 tgggtgaatc agaagcttaa ttacgattac aaggcgaaca gttgtgcgat gttcaaggcg
      361 tgtggatatt atacgcaagt ggtttggaaa aactcgacca aacttgggtg tgctagggtc
      421 aagtgcttaa atggtgcacg ctttattacg tgcaattatg accccaaagg gaacgtaccc
      481 aaagagaaac catattaa
//
LOCUS       XM_071832850             834 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842742), mRNA.
ACCESSION   XM_071832850
VERSION     XM_071832850.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..834
                     /gene="LOC139842742"
                     /note="uncharacterized LOC139842742; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842742"
     CDS             1..834
                     /gene="LOC139842742"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688951.1"
                     /db_xref="GeneID:139842742"
                     /translation="MGSMQILNAINAKVEVPKVMAKGLQFVEVYVRGNRVRALVDTGA
                     THNFVSTEEAKRLGIKEIKEGGMIKTVNANAKLISGVAKDAQVNIGEWEGMIHLSVVH
                     IDDFNLVLGMEFLDQVRGFPMPFTNLLCILDGGKTCMVSTERGSKSASKSLSTTQFKK
                     GYNKNETCYLVVARQETAEEKGKLEVPKEIEKVLDEFKDVMPKELPRKLPPRREIDHA
                     IELEPGSKPPSKVPYRMAPPELEELRRQLKELLDAGYIRPSKAPYGAPVLFQRKKDGS
                     L"
     misc_feature    79..345
                     /gene="LOC139842742"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(121..123,127..129,133..135,202..210,325..327)
                     /gene="LOC139842742"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    121..129
                     /gene="LOC139842742"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    121..123
                     /gene="LOC139842742"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(202..213,223..234)
                     /gene="LOC139842742"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    679..>825
                     /gene="LOC139842742"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgggatcga tgcaaatact caacgctatc aacgccaagg tggaggtacc caaagtaatg
       61 gctaaaggac tccaattcgt ggaagtttat gttcgaggaa accgggtacg agctttggta
      121 gatacgggag ctactcataa ctttgtctcc accgaagaag ctaagagatt ggggattaaa
      181 gagataaagg agggtggaat gataaagacg gtgaacgcga atgctaaact gattagtggg
      241 gtggctaaag atgcgcaagt gaatattgga gaatgggaag gaatgattca tctatcagtc
      301 gtgcatatag atgacttcaa tttagtactt gggatggagt tcctagatca ggtacgaggt
      361 ttccctatgc cgttcactaa cttactgtgt atcttagatg gtgggaaaac ttgtatggtg
      421 tcgaccgaac gtggaagcaa gagtgcatcc aagtcacttt cgaccacaca attcaagaag
      481 ggatacaaca agaatgagac ttgctattta gtggtagcaa ggcaagagac ggccgaagaa
      541 aagggaaaac tagaggtacc caaggagatt gagaaagtcc ttgatgagtt caaggatgtc
      601 atgcctaagg agttaccaag gaagctacca cctaggaggg agatagacca tgcgatcgag
      661 ttggagccag gatcaaaacc accttccaaa gtcccttacc gaatggcccc acccgagttg
      721 gaggagttgc ggagacaact caaggagtta ttggatgcgg gatatatccg tccctcaaaa
      781 gccccttatg gtgcaccggt gctatttcaa agaaagaagg acgggtcctt gtga
//
LOCUS       XM_071832851             840 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842743), mRNA.
ACCESSION   XM_071832851
VERSION     XM_071832851.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..840
                     /gene="LOC139842743"
                     /note="uncharacterized LOC139842743; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842743"
     CDS             1..840
                     /gene="LOC139842743"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688952.1"
                     /db_xref="GeneID:139842743"
                     /translation="MAELKNLKQSRSVQTYKDEFEVLLNKVKITIKQGISLFLASLQK
                     EIELPVRMFRPKSLEDAYCLAKLQEDTITATKKRFTPLLSTPRTTYSDDGLDGSEVDE
                     PAIQITTSVHEDIDVPDEVIEYSPQISLHALTGTTDYQTMRVYGHINKKVVHILIYSG
                     STHNFLDLEFAKKVGCLASNMSTMQVCIPGGNKITSSGECKQFQWQMNGKEFIDDMVI
                     IPIRGCDMVLGIQWLKKLGNIIWNFDELKMVFTYNKDRIVLRGKKAPLQWVKGKQMDK
                     SCV"
     misc_feature    <10..279
                     /gene="LOC139842743"
                     /note="Ty3 transposon capsid-like protein; Region:
                     Ty3_capsid; pfam19259"
                     /db_xref="CDD:437091"
     misc_feature    430..702
                     /gene="LOC139842743"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(472..474,478..480,484..486,556..564,679..681)
                     /gene="LOC139842743"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    472..480
                     /gene="LOC139842743"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    472..474
                     /gene="LOC139842743"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(556..567,577..588)
                     /gene="LOC139842743"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggctgagc tcaagaatct taaacaaagt aggtctgtgc aaacctacaa ggatgaattt
       61 gaagtattgt tgaacaaggt aaagatcact ataaaacaag gcattagttt gtttttggca
      121 agcctgcaaa aggagattga gttacctgtt aggatgttca ggcctaaatc tttagaagat
      181 gcatattgct tggccaagtt acaagaagac accataactg ccaccaagaa aagattcact
      241 ccattactat ccacaccaag aactacctac tctgatgatg ggttagatgg aagtgaagtg
      301 gatgaacctg caatacaaat aacaacctca gttcatgaag acattgatgt gccagatgag
      361 gtaattgagt actctccaca aatttcatta catgctttga ctggaacaac tgattatcag
      421 actatgaggg tttatggtca catcaacaag aaagttgttc acatattaat ttattctgga
      481 agtacacaca actttttaga tttagaattt gcaaagaaag ttgggtgttt agctagcaac
      541 atgagtacca tgcaggtctg cataccagga ggtaacaaaa tcactagttc tggggaatgc
      601 aaacagtttc aatggcaaat gaatggtaag gaattcattg atgatatggt gattatacca
      661 attaggggct gtgacatggt cttgggcata caatggctta agaagttggg taacatcata
      721 tggaattttg atgaattaaa aatggtattt acatacaaca aagatagaat tgttttaagg
      781 ggaaaaaagg caccattgca gtgggtcaag ggtaagcaaa tggacaagag ttgtgtgtag
//
LOCUS       XM_071832852             424 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842744), mRNA.
ACCESSION   XM_071832852
VERSION     XM_071832852.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..424
                     /gene="LOC139842744"
                     /note="uncharacterized LOC139842744; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842744"
     CDS             1..348
                     /gene="LOC139842744"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688953.1"
                     /db_xref="GeneID:139842744"
                     /translation="MSHNNNQNQPPVAAPPPQGYPVEEQSKDAYPAQGYPPAGYPPQG
                     YPPPGYPPQGYPHGYPPQGYPPQGYPPQGYGYPPQGYFHYVPPPQPQPQNTGFMEGCL
                     AALCCCCLLDACF"
ORIGIN      
        1 atgagccata acaacaacca aaaccagcct cccgtagctg ctcccccacc ccaaggttat
       61 ccggtagaag aacaatctaa agacgcttac ccagcgcaag ggtacccgcc cgccggatat
      121 ccacctcaag gatacccgcc acccggatac ccaccacaag ggtatccgca cgggtatcca
      181 cctcaaggtt acccaccaca aggatacccg ccacaagggt atgggtatcc acctcaaggt
      241 tactttcatt atgttcctcc tcctcaacct caaccacaaa acactggttt catggaaggc
      301 tgtttagctg cattgtgttg ttgctgtctt ttggatgcat gtttttgaat cggcaaagaa
      361 gtttcgttag ctcctaaatc gtatttattt gtttccattg gttccatatc tatttatttc
      421 atct
//
LOCUS       XM_071832853             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription factor
            bHLH84-like (LOC139842745), mRNA.
ACCESSION   XM_071832853
VERSION     XM_071832853.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 44% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139842745"
                     /note="transcription factor bHLH84-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842745"
     CDS             1..813
                     /gene="LOC139842745"
                     /codon_start=1
                     /product="transcription factor bHLH84-like"
                     /protein_id="XP_071688954.1"
                     /db_xref="GeneID:139842745"
                     /translation="MESMATMVGEWNSFSDVNVSDEAFFMAQLLENLSVPDNSSNSSA
                     FEVPSTFWPHHELNMSPDEADETSIYFSDNTNSNPHCLSQDHNSYDATPTKDFNLFSS
                     SRKRSCSMTDVRENREKIKCRKTQKFVSKSSEDETDQGAFNGKFLKFYGSDGESNWSQ
                     ESSISPRPKELTIPKSNGKVKANRGSATDPQSVYARKRRERINERLRVLQKLIPNGTK
                     VDISTMLEEAVQYVKFLQLQIKLLSSDDMCMYAPIAYNGMDIGLDLMTPSPR"
     misc_feature    559..747
                     /gene="LOC139842745"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein INDEHISCENT (IND) and similar
                     proteins; Region: bHLH_AtIND_like; cd11454"
                     /db_xref="CDD:381460"
     misc_feature    order(571..576,583..588,592..597,607..609,658..663)
                     /gene="LOC139842745"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:381460"
     misc_feature    order(601..606,613..615,622..627,634..636,661..666,
                     673..678,685..687,694..696,703..708,715..717,724..729,
                     733..738,745..747)
                     /gene="LOC139842745"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:381460"
ORIGIN      
        1 atggaatcta tggctacaat ggtaggagaa tggaactcat tcagcgacgt aaacgtttca
       61 gacgaagctt tttttatggc tcagttgctt gaaaatttgt ctgttcccga taattcttcg
      121 aattcttctg cctttgaagt accatctact ttttggccac accatgaact aaacatgagc
      181 cccgatgagg ccgatgaaac ttcaatttat ttttctgata acaccaatag taacccacat
      241 tgtctgtcac aagaccacaa ttcatatgat gcaacaccta caaaagattt taatttgttt
      301 tcaagttcta ggaaacgctc ttgtagcatg acagatgtcc gcgagaacag ggaaaagatt
      361 aagtgtagga aaactcagaa gtttgtttct aaaagcagtg aagatgagac tgaccaaggt
      421 gcattcaatg ggaaattttt gaaattttat ggttctgatg gtgaatcgaa ttggtctcag
      481 gagtcgagta ttagtccaag accaaaagag ttgactattc caaagtcaaa tggcaaggta
      541 aaagctaata gggggtcggc aactgatcca caaagtgtgt atgcacggaa gagaagagaa
      601 cgaattaatg agcgtttaag agtgctgcag aagcttattc ctaatggtac aaaggttgat
      661 ataagcacaa tgcttgaaga ggctgttcag tatgtgaaat ttttgcagct ccaaatcaag
      721 ttattgagct ctgatgatat gtgcatgtat gctccaattg cgtacaacgg aatggatatc
      781 gggcttgact taatgactcc atcaccaaga tga
//
LOCUS       XM_071832854            1503 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842746), mRNA.
ACCESSION   XM_071832854
VERSION     XM_071832854.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1503
                     /gene="LOC139842746"
                     /note="uncharacterized LOC139842746; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842746"
     CDS             1..1167
                     /gene="LOC139842746"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688955.1"
                     /db_xref="GeneID:139842746"
                     /translation="MASFAASFISSSSSSSCASSSSLNFGRNQFVRFPIVRFHKVSIK
                     KTLVFASSSSSDGIRPHEGDSRSKKKSVLLKLIQEIEPLDVSLIQRDVPPTTVDAMKR
                     TISGMLGLLPSDQFQVLIEALWKPLSKLLVSSLMTGYTLRNAEYRLCLERNFDNDEEA
                     TDKQTFEDSKSQALQTLLHNNIITNTLCSQDELHKSEKVGENASNIPDLDQMTPEMQQ
                     YILKLQSRLFSVKKELHEVKRKNAALQMQQFVGEEKNELLDYLRSLQPEKVAELSEPT
                     SADLKETIHSVVHGLLATLSPKMHSQAPPHISETTSIVETANTEIGNDLIENTSVQFQ
                     PLISLTRDYLARLLFWCMLLGHYLRGLEYRVELMDLLALSSNAQIEASDGENLQ"
     misc_feature    214..462
                     /gene="LOC139842746"
                     /note="Protein of unknown function (DUF760); Region:
                     DUF760; pfam05542"
                     /db_xref="CDD:461674"
     misc_feature    766..1113
                     /gene="LOC139842746"
                     /note="Protein of unknown function (DUF760); Region:
                     DUF760; pfam05542"
                     /db_xref="CDD:461674"
ORIGIN      
        1 atggcatctt ttgccgcttc ttttatatct tcatcatctt cttcttcttg tgcttcatct
       61 tcttcactta attttgggcg taatcaattc gtacgctttc caatcgttcg ttttcataaa
      121 gtttcaatca agaaaaccct agtttttgcg tcttcttctt catcagatgg aatcagacca
      181 catgaaggag attcacgctc caagaaaaag tcggtactgt taaaattgat tcaagagata
      241 gagccattag atgtaagcct catccagaga gacgtaccac ctactacggt agacgcgatg
      301 aagaggacta tttcaggaat gttagggtta ctaccttcag accagtttca agttttgatt
      361 gaagctttat ggaaacccct ttcgaaacta ttggtttctt ctttgatgac cgggtataca
      421 ctgcggaatg ctgaatatag gctatgtttg gagaggaact ttgataatga tgaagaagct
      481 acagataagc agacttttga agattcgaaa tctcaagcat tacaaacctt actgcacaac
      541 aatataataa ctaatacact ttgtagtcaa gatgaactac ataagtctga aaaagttggt
      601 gaaaatgcat caaatattcc agatcttgat caaatgaccc ctgaaatgca acaatatatt
      661 ttaaagctgc aatcccgctt gttttctgtc aaaaaggagc tccatgaagt taaaaggaag
      721 aatgcagctc tccagatgca acagtttgtt ggggaagaaa agaacgaatt gttggactac
      781 ttgagatcct tacaaccaga aaaggtggca gagctatcag agccaacatc tgcagacctg
      841 aaagaaacaa tccattcggt agtccatggt ctccttgcga ccctttcccc taagatgcac
      901 tcacaagctc ctcctcatat atctgaaacc acctcaatag tagaaactgc aaatactgaa
      961 attggcaacg atctcataga gaacacttca gttcaatttc agcccctcat ctctttaact
     1021 cgggactatc tagctcgtct tctcttttgg tgcatgctac tggggcatta cctgagaggg
     1081 ttggagtacc gagtggaact tatggacctt ttagcactgt caagcaatgc acagattgag
     1141 gcttctgatg gtgaaaatct acagtgagta aggacttcac atcagtatgt gtgtttgtag
     1201 acagtttgat aactcggtcc acatggtgat caatgatgat atttatatta cgagttggga
     1261 tcttataaag aactttagtt ggttgcaatg aagtgatata gaaactgcag tttcaagatt
     1321 tattagatgt tgacacctaa gtcctataag aatcaaagtt tagggcaaca agggcaatca
     1381 ttgccctttc agccctaaca attgaagtag tagggtttta gtagcgacat gtttaaaatc
     1441 tgacttgatg tttcttgttg ctgggcacaa gggtgatagg gtgtatgtgt tggttgcttt
     1501 ctt
//
LOCUS       XM_071832855             837 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842747), mRNA.
ACCESSION   XM_071832855
VERSION     XM_071832855.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..837
                     /gene="LOC139842747"
                     /note="uncharacterized LOC139842747; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842747"
     CDS             1..837
                     /gene="LOC139842747"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688956.1"
                     /db_xref="GeneID:139842747"
                     /translation="MCESLESLLKKVDTSWLLCGDFNEVRNEDERFNSVYIPSRAMIF
                     NNFISNNELIEAPLGGRKFTRVCDNGIKMSKLDRFLVCEKFINLWEDLSAIVMDRKFS
                     DYCPILLRDKIVDFGPKPFKFFNEWLNVDGVDKVIKEAWNIEVKDQEIKETKKRVDKW
                     ELLAENEILLEHERMECRKQWLSKERSKVNMLRQKSRIKWILEGDENSSYFHGIIRRK
                     YNSNNIQGLVINGNWNENACDIMNAIHSHFELQFKKKCNNRPTMSDLRYPVLSEEQAV
                     SL"
ORIGIN      
        1 atgtgcgaat ccttggaatc tttactgaaa aaagttgaca cgagttggtt attgtgcggg
       61 gacttcaatg aagtgaggaa tgaggatgaa aggtttaata gtgtatacat cccaagtcgt
      121 gcaatgatat ttaacaattt catctcaaat aatgagctaa ttgaagcccc tcttggcggt
      181 agaaaattca cacgggtttg tgataatggt attaagatga gtaagcttga taggttcctt
      241 gtatgtgaaa aattcattaa tttatgggag gatttatcag ctattgttat ggataggaaa
      301 ttctcggact attgtccgat tttattaaga gataagattg ttgatttcgg gcctaaacca
      361 tttaagtttt ttaatgaatg gttaaatgtt gatggagtag acaaggtgat caaagaggca
      421 tggaacattg aggtaaagga tcaagagatc aaagagacca aaaaaagggt ggataagtgg
      481 gaattgttag cagaaaacga aatccttttg gagcatgaaa gaatggagtg tcgaaagcag
      541 tggttgagca aagaaagatc aaaggtaaat atgcttagac aaaaatcaag aatcaagtgg
      601 atactagaag gtgacgaaaa ttcgagctac tttcatggaa ttattcgaag gaagtacaat
      661 agcaataaca ttcagggttt ggtcattaat ggcaattgga atgaaaatgc gtgtgatatc
      721 atgaatgcca ttcactcaca ttttgaactt caatttaaga aaaagtgtaa caacaggccc
      781 accatgtccg atttaagata cccggttttg agtgaagagc aggccgtaag cttatag
//
LOCUS       XM_071832856             678 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842748), mRNA.
ACCESSION   XM_071832856
VERSION     XM_071832856.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..678
                     /gene="LOC139842748"
                     /note="uncharacterized LOC139842748; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842748"
     CDS             1..678
                     /gene="LOC139842748"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688957.1"
                     /db_xref="GeneID:139842748"
                     /translation="MAYGTTPDMFDEYIKIGEKTAAQCLENFCQCVFHLFAREYLYKP
                     TADDIARLYNFHSQKHGLPGMLGSIDCMHWEWKNCPVAWQGQYTRGDQKGPSVMLEAV
                     ASQDLWIWHAFFGMAGSNNDINVLNMSPLFNTIKDGTAPTSPFEVNGHHYERRFQESA
                     RKDIERAFEVLQGRFAMLKTPARTLDFNKIRRHMYACIVLHNMIQENNGFVITHREER
                     MIARNPL"
     misc_feature    115..627
                     /gene="LOC139842748"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcgtatg gaaccacacc tgatatgttt gacgaatata taaaaattgg tgagaaaact
       61 gctgcccaat gtctagaaaa cttttgtcaa tgcgtatttc atttgtttgc aagagagtat
      121 ttgtataaac caaccgccga tgatattgca cggctttata attttcattc acaaaaacat
      181 ggtttaccgg gtatgcttgg tagtattgat tgtatgcatt gggagtggaa aaattgccct
      241 gttgcgtggc aagggcaata tactcgaggt gatcaaaaag gcccgtctgt tatgctcgag
      301 gcagtagcct ctcaagattt gtggatatgg catgcatttt ttggtatggc gggttcaaac
      361 aacgacatta atgttttaaa tatgtcgcca ttattcaaca ccataaaaga tggcactgct
      421 ccaacttcac catttgaagt aaacgggcat cactatgaga gaaggtttca agaaagtgca
      481 aggaaagata ttgagcgtgc atttgaggta cttcaaggta gatttgcaat gttaaaaact
      541 ccggcgagaa ctttagactt caacaaaatt agaagacata tgtacgcttg tattgtctta
      601 cataacatga ttcaagaaaa caatggtttt gtgataactc atcgagagga aagaatgatt
      661 gcaaggaatc cgctatga
//
LOCUS       XM_071832858             429 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842750), mRNA.
ACCESSION   XM_071832858
VERSION     XM_071832858.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..429
                     /gene="LOC139842750"
                     /note="uncharacterized LOC139842750; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842750"
     CDS             1..429
                     /gene="LOC139842750"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688959.1"
                     /db_xref="GeneID:139842750"
                     /translation="MKTKHGEDKELCLNLSLGQNLKPSYLKPISMKVCHFCNRKFYSS
                     QALGGHQNAHKKERDAARRYHSLIMPTGLTIGQTLGVHPYSLQLSQTIDIKSSVVRFP
                     EPSAVYPATWVQSEIEKGSMWHENFCQSSSPVALDLNLKL"
     misc_feature    <100..>180
                     /gene="LOC139842750"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; Region: SUF4-like;
                     cd20908"
                     /db_xref="CDD:411020"
     misc_feature    100..162
                     /gene="LOC139842750"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:411020"
ORIGIN      
        1 atgaaaacca aacacggtga agataaagaa ctgtgtttaa atcttagcct aggccaaaat
       61 ctaaaaccct cgtacttgaa accaatctct atgaaagtat gccacttttg taatagaaag
      121 ttctacagtt cacaggcact ggggggtcac caaaatgcac acaagaagga gagagatgca
      181 gctagaagat accattcact catcatgcca actgggttga caattggtca aacacttggc
      241 gtgcacccat actcgcttca actcagccaa accatagaca taaaatcatc agtagttcga
      301 tttccggaac ctagtgctgt gtatccagcc acgtgggtgc aaagcgagat cgagaagggt
      361 tcgatgtggc atgaaaattt ctgccagtca tcaagtccag ttgcacttga tttgaacctc
      421 aagttgtaa
//
LOCUS       XM_071832859            1137 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842751), mRNA.
ACCESSION   XM_071832859
VERSION     XM_071832859.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1137
                     /gene="LOC139842751"
                     /note="uncharacterized LOC139842751; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842751"
     CDS             1..1137
                     /gene="LOC139842751"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688960.1"
                     /db_xref="GeneID:139842751"
                     /translation="MKLNPEKCIFDFEEGYFLGHVMMPQGIRANPKKIQAVDEMVSPR
                     TKKEVQSLNGKLAALSRFLSKAAERSLPFFQVLKVLSKPEISGRMAKWEIELGEHEIN
                     YALRNAIKGQIMANFMVEFINSGPPTANEMLPQTVTWDRYTDGASSSDGAGAGLILTS
                     PDGAEHTYDLRFAFPVSNNEAEYEALFFGLCIAEKMGIKALKVAVDSQLVTAPVEEMN
                     TWMSPIVNYLKDGTLPADSVTASKIRMKAPMYVMRDGVLYKKSFLGPLLRCVGPQVVE
                     TVIRERRYQELHLLSTPAPQIHASSHELIPATSAWPFYKWAIDLVGPFPDGRHLVVAV
                     DFFTKWVEAKPLKSITDRQIVNFVWEEILCRFGVPHEIVSDNEK"
     misc_feature    424..>630
                     /gene="LOC139842751"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    order(430..441,532..537,544..546,616..618)
                     /gene="LOC139842751"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    934..>1128
                     /gene="LOC139842751"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgaagctca acccggagaa atgcatcttt gatttcgagg aaggttattt ccttggtcac
       61 gtcatgatgc cacaaggcat cagagcgaat ccgaaaaaga ttcaagctgt ggacgagatg
      121 gtatcgccac gtacgaaaaa ggaggtacaa agcctgaatg ggaagctagc agcgttgtcc
      181 aggttcttgt ccaaagcagc agagcgttcc ctaccgttct ttcaggtgct gaaggtttta
      241 agcaagccgg agatctccgg ccggatggca aaatgggaaa tcgaactggg agagcatgaa
      301 atcaactacg cgctgcgtaa cgctataaaa ggacaaatca tggccaattt tatggtagaa
      361 ttcattaatt caggaccacc gactgccaac gaaatgttac cccaaaccgt cacatgggat
      421 cgttacactg acggagcgtc aagttcagac ggggccggtg ccggcctgat acttacaagc
      481 ccagacggtg cggaacatac ctatgactta cgtttcgctt tccctgtttc taataatgaa
      541 gcggaatatg aagcgttgtt cttcgggtta tgtatcgcag aaaagatggg tattaaggca
      601 ctaaaagtag cggttgattc acagctggtg acggcaccag ttgaggagat gaacacttgg
      661 atgagtccca tcgttaatta cctcaaagac ggtacactac cagctgacag cgtaacagcc
      721 agtaaaatcc gcatgaaggc tcccatgtac gtcatgcgtg acggcgtact ttataaaaag
      781 tcctttttgg gccctctact gcgttgtgtg ggtccacaag tggttgaaac cgtgataagg
      841 gagcgacgtt atcaagaatt gcatctcttg tcaacgcctg cgccacaaat ccatgcgtcg
      901 tctcatgaat tgatccccgc cacatcagct tggccatttt acaagtgggc aattgatttg
      961 gttggtccgt tcccggacgg acgacacctt gttgtggcgg ttgacttttt tacgaaatgg
     1021 gtagaggcta agcctttgaa aagcattacg gataggcaga ttgttaattt tgtttgggaa
     1081 gaaatattat gccgtttcgg ggtcccgcat gagattgtaa gcgacaacga aaaatag
//
LOCUS       XM_071832860            2502 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842752), mRNA.
ACCESSION   XM_071832860
VERSION     XM_071832860.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2502
                     /gene="LOC139842752"
                     /note="uncharacterized LOC139842752; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:139842752"
     CDS             1..2502
                     /gene="LOC139842752"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688961.1"
                     /db_xref="GeneID:139842752"
                     /translation="MVISQDRENSVKRFSSLPLVNQKHEENQMQMSRSSKGLMRKWGS
                     GSKLESSTRRMEEVVCPTCTVHLHAHKGLLVKEHKNVNKVLKIQKVTVQETGLTSHGQ
                     WVSHKRHLEDTVSDDSSDVVEIRKIEFLNATTNPDASDHTSMNIKEQLAEAERLHSWT
                     NGHIIFQAAWFGRFWWLEYSLEKDAAYCFPCYLFNKKPIGRAGSDRFTTKGFNKWKKI
                     NCGKDCAFFKHEGTSPASAHNFSVKCYEDFRNQVCHIENVIEKQTAQEIMDNRLRVKT
                     SVEIIKWLTMQACALRGHDERPGSINRENFLELLKFISSYNKEVENVVSDNAPQNAQY
                     TSPDVQKEILHIFARNVQQSIRDEIGNAKFCLIVDESRDESKKEQMAIVVRFVDRDGH
                     VKERFLDLVHVKDTTALTLQNEILSSLSFHKLDFQDIRGQGYDGASNMRGEWKGLQAL
                     ILKECPYAYYIHCFAHQLQLALVAASKEVVEVHKFFKNLNFIINVIDSSSKRHDQLQN
                     AQISEISLLTETGELETVRDIAINESTSSQKGDASFALTHLLSFDFVFVMRLMKKIMK
                     KTDKLCQALQCKSQDIVNALSLVSTTKSLIQNLRDVGWQSLFVKVVSFCENNNIQVPE
                     MSQSYKDIIRSRSEKDNVTVEHHYRVDVFFAAIDSQLQELNSRFNESVTELLRLSVAL
                     NPKKPFNKADICSLAKKFYPLDFTEQENIQLKSELQHYELDLPNDPELKNVQTIAELC
                     RGLQETGRVKVYPMLDRLIRLVLTLPVSTATSERAFSAMKIMKTRLCCSMGDDYLKSC
                     LILYIEKEIADSFTSDEITDAFAVKKRRRVQLLPH"
     misc_feature    613..1338
                     /gene="LOC139842752"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    <2254..2421
                     /gene="LOC139842752"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggttattt ctcaagatag agagaattcg gtgaaacggt tttcaagctt acccctggtc
       61 aatcagaaac acgaagaaaa tcaaatgcag atgtcacgat cttctaaagg tttaatgcgt
      121 aaatgggggt caggttccaa gttggaaagc tctaccaggc gaatggaaga agttgtgtgc
      181 cctacttgta ctgttcattt acatgctcac aagggccttt tggttaaaga acataaaaat
      241 gtgaataagg tcttgaagat ccaaaaggtc accgtccagg aaacgggatt gacttctcat
      301 ggtcaatggg tttcacacaa gagacatttg gaagacactg tatctgatga tagttcggat
      361 gttgtagaaa ttaggaaaat cgaatttctc aacgccacca caaatcccga tgcatccgat
      421 catacaagta tgaatattaa agaacaactc gctgaagctg aaagactcca ctcatggacc
      481 aacggtcata ttatctttca agcagcttgg tttggtagat tttggtggtt agaatattct
      541 ctagaaaaag atgctgcata ttgttttcct tgttatctat ttaataagaa acctattgga
      601 agagctggtt cagatagatt tactacaaag gggttcaata aatggaaaaa gattaattgt
      661 ggtaaagatt gtgcattctt taaacatgaa ggtacatctc cggcttctgc tcataatttt
      721 tctgtgaaat gttatgagga ttttagaaac caggtttgtc atatagaaaa tgtgatagaa
      781 aaacaaacag cgcaagagat tatggacaat agattgcgag tcaaaacttc tgttgagata
      841 ataaaatggc taacgatgca agcttgtgct cttaggggtc atgatgagag gcctggttca
      901 ataaataggg aaaacttttt agaattgcta aagtttattt cttcttacaa taaggaagtt
      961 gagaatgttg tttcagataa tgctccacaa aatgcccaat atacttcacc tgatgtgcaa
     1021 aaagaaattc tgcatatttt tgctagaaat gttcaacagt caattcgtga tgaaatcggg
     1081 aatgcaaaat tttgtttgat cgttgatgag tcaagagatg aatctaagaa agaacaaatg
     1141 gcaattgttg tgagatttgt tgaccgagat gggcatgtaa aagaaagatt tttagacttg
     1201 gttcatgtca aagataccac tgcattgaca ttacaaaatg aaatcttgtc atctctttct
     1261 tttcataaac ttgattttca agatattcga ggtcaaggtt atgatggggc tagtaatatg
     1321 cgcggggaat ggaaaggatt acaagcttta atattaaaag aatgccctta cgcgtattat
     1381 atacattgtt ttgctcatca gttgcaacta gctttggtgg cagcatctaa agaggtagtc
     1441 gaggtgcata aattttttaa aaatttgaac tttataatta atgtcattga ttcttcttcc
     1501 aagcgtcacg atcaattaca aaatgctcaa atttctgaaa tttcactgtt gaccgaaact
     1561 ggagaacttg agactgtacg tgacattgct attaacgaat ctacttcttc tcaaaaaggt
     1621 gatgcttctt ttgctctcac acacttatta tcatttgatt ttgtttttgt gatgcgtttg
     1681 atgaagaaaa taatgaagaa aaccgataag ctttgtcaag ctttgcaatg caaatctcaa
     1741 gatatcgtca atgctttgtc tttggtttcc actactaaga gtttgattca aaatctaaga
     1801 gatgtaggat ggcaatcact tttcgttaaa gttgtttcat tttgtgagaa taataacatc
     1861 caagttcccg aaatgagtca atcttacaaa gacattatcc ggtctcgttc ggaaaaggac
     1921 aatgtgactg ttgaacatca ttatcgagtt gatgtattct ttgctgctat tgatagtcag
     1981 ttgcaagagt tgaactctag atttaatgag tctgtgacgg aacttcttcg actcagtgtt
     2041 gctctaaacc caaaaaagcc attcaataaa gctgatattt gtagtctagc aaaaaaattc
     2101 tatcctttag actttacaga gcaagaaaat atacagctga aatctgagtt gcaacattat
     2161 gagctagatt tgcctaatga tccagagtta aaaaatgttc aaacgattgc agaattatgt
     2221 agaggcctac aagaaactgg gagggttaaa gtgtatccaa tgcttgatag attgattcgt
     2281 cttgtattaa ctcttccagt ttcaacagca acaagtgaaa gagctttttc agcaatgaag
     2341 attatgaaaa cgagactttg ttgtagcatg ggtgatgact atcttaaaag ttgtttgatt
     2401 ctttacattg aaaaggaaat tgccgattca tttacttcgg atgagataac agatgctttt
     2461 gctgtcaaga agcgtagacg cgtccaactt ctaccacatt ag
//
LOCUS       XM_071832861             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842753), mRNA.
ACCESSION   XM_071832861
VERSION     XM_071832861.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139842753"
                     /note="uncharacterized LOC139842753; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842753"
     CDS             1..462
                     /gene="LOC139842753"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688962.1"
                     /db_xref="GeneID:139842753"
                     /translation="MRYDNDDWVLCGDFNEVRQVEERRNCEFIQCRAKIFNNFIGKMG
                     VFEVSLVGKKFTTICDNGLKFNKLDSFLISSSVLNKWNDLSVKVLDRKASYHCPLVLR
                     SKTCDYGPKPYKVFNSWLNAKGTADIITSTWNLEVDSRRPDIRFRKTFKEC"
ORIGIN      
        1 atgaggtatg ataatgatga ttgggttttg tgtggggact tcaatgaggt tcgtcaagtt
       61 gaggaaagaa ggaattgtga gttcattcaa tgtagggcaa aaatattcaa caactttatc
      121 gggaaaatgg gagtctttga agtttcgttg gttggaaaga aatttactac aatttgcgat
      181 aacgggttga aatttaacaa actggatagc tttttgatct ccagttcagt tttgaataag
      241 tggaatgacc tctctgttaa ggtgctagat agaaaggctt catatcattg tcctttggta
      301 cttcgttcta aaacttgtga ttatggtcca aagccctata aggtgtttaa cagttggctt
      361 aacgcgaagg ggactgctga tatcataact agtacgtgga atcttgaagt agatagcaga
      421 agacccgata ttcgttttcg aaagacattt aaagaatgtt aa
//
LOCUS       XM_071832862             462 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842755), mRNA.
ACCESSION   XM_071832862
VERSION     XM_071832862.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..462
                     /gene="LOC139842755"
                     /note="uncharacterized LOC139842755; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842755"
     CDS             1..462
                     /gene="LOC139842755"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688963.1"
                     /db_xref="GeneID:139842755"
                     /translation="MRYDNDDWVLCGDFNEVRQVEERRNCEFIQCRAKIFNNFIGKMG
                     VFEVPLVGKKFTTICDNGLKFSKLDSFLISSSVLNKWNDLSVKVLDRKASYHCPLVLR
                     SKTCDYGPKPYKVFNSWLNAKGTADIITSTWNLEVDSRRPDIHFRKTFKEC"
ORIGIN      
        1 atgaggtatg ataatgatga ttgggttttg tgtggggact tcaatgaggt tcgtcaagtt
       61 gaggaaagaa ggaattgtga gttcattcaa tgtagggcaa aaatattcaa caactttatc
      121 gggaaaatgg gagtctttga agttccgttg gttggaaaga aatttactac aatttgcgat
      181 aacgggttga aatttagcaa actggatagc tttttgatct ccagttcagt tttgaataag
      241 tggaatgacc tctctgttaa ggtgctagat agaaaggctt catatcattg tcctttggta
      301 cttcgttcta aaacttgtga ttatggtcca aagccctata aggtgtttaa cagttggctt
      361 aacgcgaagg ggactgctga tatcataact agtacgtgga atcttgaagt agatagcaga
      421 agacccgata ttcattttcg aaagacattt aaagaatgtt aa
//
LOCUS       XM_071832863             582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842756), mRNA.
ACCESSION   XM_071832863
VERSION     XM_071832863.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..582
                     /gene="LOC139842756"
                     /note="uncharacterized LOC139842756; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842756"
     CDS             1..582
                     /gene="LOC139842756"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688964.1"
                     /db_xref="GeneID:139842756"
                     /translation="MALYQRTSGESRSRTAALDDRLLGNASNVQETCRNKLLPQSLGI
                     FVWRAKRKRLPVRVELSNRGIDLDSVCCPMCDDGVESLDHTLPLCRYAYEVWDNVYRW
                     CGLGDFSNISVNELFNGDGANSRCVEGKSLWQAIEWVCGYLIWKNRNDKVFNNSSRSC
                     ANLLNDIQVKSFEWISKKKKKKKKQRLLSGTNG"
     misc_feature    <130..285
                     /gene="LOC139842756"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcattgt atcaaagaac ctctggggag agtcgcagcc gaactgcagc actagatgat
       61 cggcttcttg gaaatgcatc gaatgtacaa gaaacatgta gaaataagtt acttcctcaa
      121 tctctaggaa tctttgtgtg gagagcaaaa cgcaaaaggt taccggttcg ggttgaattg
      181 tctaatcgag gtattgatct tgattcggta tgttgcccaa tgtgtgatga tggcgttgaa
      241 tcgctcgacc acacattgcc actatgcagg tatgcttatg aggtatggga taacgtttac
      301 cgttggtgtg gtctcggtga cttctcgaat atcagcgtta acgagttgtt caatggagat
      361 ggagctaata gtcggtgtgt tgagggtaaa tcgttgtggc aagccatcga atgggtatgc
      421 ggttacttga tatggaaaaa tcgaaacgat aaagtcttca ataattcttc gcgttcgtgt
      481 gcgaatcttc tcaacgacat tcaagtaaaa tcctttgagt ggatatcaaa aaaaaaaaaa
      541 aaaaaaaaaa aacaacgtct attgagtggc accaatggtt aa
//
LOCUS       XM_071832865             939 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides scopoletin
            glucosyltransferase-like (LOC139842757), mRNA.
ACCESSION   XM_071832865
VERSION     XM_071832865.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..939
                     /gene="LOC139842757"
                     /note="scopoletin glucosyltransferase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842757"
     CDS             1..939
                     /gene="LOC139842757"
                     /codon_start=1
                     /product="scopoletin glucosyltransferase-like"
                     /protein_id="XP_071688966.1"
                     /db_xref="GeneID:139842757"
                     /translation="MRLRLNEPNVSSDYESFSVPHLPHEIILNKKQLPHFEGEYYKDF
                     IKVLIEAMQAELTSYGVIFNSFYELEPDYARYYHEVMKRKAWHIGLVSIFNKNFEDKF
                     GRGTKSAIDEHECLKWLETKLPDSVVYLSFGTMGLEACDQDFIWVIKEDQETSIPKGF
                     EARMKEKGKGLIIKGWALQVLILDHDSFGVFVTHCGWNSLLEGVSGGVPLVTWPVMAE
                     QFCNAKLVTNILKIGVSIGDVEWSSTSYCDGVKREMIEKALARVVGSEGEEMRNRAWV
                     LKEKAKDAMMAGGSSYSDLTTCIEDIKSFKSNGSKW"
     misc_feature    <1..918
                     /gene="LOC139842757"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; Region: Glycosyltransferase_GTB-type;
                     cl10013"
                     /db_xref="CDD:471961"
     misc_feature    order(400..402,580..582,586..588,592..597)
                     /gene="LOC139842757"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 atgcgattaa gacttaatga gcctaatgtt tcgtccgatt acgaatcctt tagtgtccct
       61 catcttcctc acgagatcat cttgaataaa aagcaattgc cacattttga gggtgaatat
      121 tacaaagatt tcataaaggt gttgattgaa gctatgcagg cagaattaac aagttatgga
      181 gttattttta atagctttta tgagcttgaa ccggattatg ctcgctatta tcatgaagtt
      241 atgaaaagaa aagcatggca tattggacta gtttcgatat ttaacaagaa ttttgaagat
      301 aaatttggaa gaggaacgaa atcagctatt gatgagcatg aatgcttgaa atggttggaa
      361 acaaaattac ccgattcggt tgtgtacttg agttttggga ctatgggact agaagcgtgc
      421 gatcaagact tcatttgggt aatcaaggaa gatcaagaaa catcgattcc taaagggttt
      481 gaagctagaa tgaaagagaa aggtaaaggg ttgataataa aggggtgggc tctacaagtg
      541 ttgattcttg accatgactc gtttggggta ttcgtgactc attgcgggtg gaactcatta
      601 ttggaaggcg tttctggtgg ggtgcctctg gtgacgtggc cggtcatggc tgagcaattc
      661 tgtaacgcga aactagtaac gaacatttta aagattggag tttcgatagg tgatgtggag
      721 tggagttcga cttcatattg cgacggcgtt aaacgggaaa tgattgagaa agctttggca
      781 agggttgttg ggagcgaagg tgaggaaatg cgaaaccgag cttgggtact taaggaaaag
      841 gcaaaagatg cgatgatggc aggtggatca tcgtactcgg atttgaccac ttgtattgag
      901 gatataaaat cattcaaatc caacggctcc aaatggtag
//
LOCUS       XM_071832866            1509 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842758), mRNA.
ACCESSION   XM_071832866
VERSION     XM_071832866.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 45% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1509
                     /gene="LOC139842758"
                     /note="uncharacterized LOC139842758; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842758"
     CDS             1..1509
                     /gene="LOC139842758"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688967.1"
                     /db_xref="GeneID:139842758"
                     /translation="MSNIRKPNPKFNLFTTTKTLSPIPKSPTEALYDPNWKLAMTDEY
                     NALINNKTWDLVPRDPNMHVIRSMWIFKHKLRSDGSFERYKARLVGDGRSQQVGIDCK
                     ETFSPVVKPATIRVVLTLALSNNWSIRQLDVKNAFLHEIVEEQTIKSESSSDSDSTNS
                     IMENLKPSNNNNNNNNNNNININNNNNNNNCLENSGASIYDDDEDDGDVCQICSNPGE
                     DLRYSCVCSGSMKFVHEDCLLKWLNHSNAPKCEICKHPFSFSPLYAENTPAKLPYNEL
                     VIGMSMKLYHVLLFVLRVTLTLWAWLVIVPLLTFYFWRLSFATSINQLLTSYYFCNAF
                     LTNCVHGFLLSASIICISFGAVSLSDYFRPLLEIGGDRDDDDDEGDINGARVDRQNQN
                     FNGGGEQEIDVEARVEQMFDVLDDEEDADNGPLAGARQLIKRFAEIADCIEVGVEQMI
                     YDLDVEEDEDHVTFDELLNLLVATANHVSTSFFYFYFFHFLCVFIPIWTCCV"
     misc_feature    148..>435
                     /gene="LOC139842758"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    625..>1041
                     /gene="LOC139842758"
                     /note="E3 ubiquitin-protein ligase DOA10
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: SSM4; COG5183"
                     /db_xref="CDD:227510"
     misc_feature    625..765
                     /gene="LOC139842758"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(628..630,637..639,676..678,691..693,700..702,
                     709..711,748..750,757..759)
                     /gene="LOC139842758"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438362"
ORIGIN      
        1 atgtctaata tacgtaaacc caacccaaaa ttcaatctat ttacaaccac caaaactcta
       61 tcacccattc ctaaatctcc aactgaagca ctctatgacc ctaattggaa gcttgctatg
      121 accgatgaat ataacgctct tattaataac aagacatggg atttagtacc tcgtgaccct
      181 aatatgcatg taatacgttc tatgtggatt tttaaacata aattacgatc tgacgggtct
      241 tttgagcgat acaaagctcg tttagttggt gatggcaggt ctcaacaggt tggaatagat
      301 tgcaaagaaa catttagtcc ggttgtcaaa ccggctacta tacgggttgt attaacgttg
      361 gctctttcaa ataattggtc gataagacaa ctcgatgtta aaaacgcgtt tcttcacgag
      421 attgtcgagg aacaaaccat taaatcagaa tcttctagtg attcagattc aacaaattca
      481 atcatggaaa atctgaaacc aagtaataat aataataata ataataataa taataatatt
      541 aatattaata ataataataa taataataat tgcttagaga atagtggagc ttcgatttac
      601 gatgacgatg aagatgacgg cgatgtttgc cagatttgtt ctaatcctgg tgaagactta
      661 cggtattcgt gtgtttgtag cggcagtatg aagttcgttc acgaggattg ccttttaaag
      721 tggcttaatc acagcaacgc tcccaagtgt gagatttgca aacatccatt ttcattttca
      781 cctctgtatg cagagaatac ccctgcaaaa cttccttata acgagttagt aattgggatg
      841 tcaatgaaac tctatcatgt gctgctgttc gttctgcgtg tcactcttac actttgggcg
      901 tggcttgtga tcgtgccctt gcttactttc tacttttggc gcttatcatt cgctactagc
      961 attaatcaac ttctaacgag ttattacttc tgtaatgctt ttcttaccaa ctgtgtgcat
     1021 ggattcttac tctctgctag tatcatttgc atatctttcg gggctgtatc attgagtgat
     1081 tattttagac ctttactaga aattggtggt gatagagatg atgatgatga tgaaggagat
     1141 ataaacggtg ctcgtgttga cagacaaaac caaaatttta atggcggtgg agaacaggaa
     1201 attgatgttg aggctcgtgt tgaacaaatg tttgatgttt tggatgatga ggaagatgca
     1261 gacaatggcc cacttgctgg agctcgtcag ttgattaaaa gatttgcaga aattgcagat
     1321 tgtattgagg ttggtgttga acagatgatt tatgatttgg atgttgagga agatgaagac
     1381 catgtcacat ttgatgagct acttaatctt ttggtggcga ctgcaaatca tgtgagcaca
     1441 tcattttttt atttttattt ttttcatttt ttatgtgtat ttataccgat ttggacctgc
     1501 tgtgtgtga
//
LOCUS       XM_071832867             561 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842759), mRNA.
ACCESSION   XM_071832867
VERSION     XM_071832867.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..561
                     /gene="LOC139842759"
                     /note="uncharacterized LOC139842759; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842759"
     CDS             1..561
                     /gene="LOC139842759"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688968.1"
                     /db_xref="GeneID:139842759"
                     /translation="MCVGVLYCRSFLGSMFRSPAVDIYATISTDLLHTILQKDATAKK
                     AWDRLDEIFSDNKHSRALALDIQFMNIKLDNFSSVSAYCQEIKMIADQISNVSEPVID
                     KRMVLQLISGLNDAYDVIGSQIQHAKELPKFYEARSMLILEENRKNRSSNTVTASSET
                     ALIATVNNKVNRQHQNPNDRTNFTNS"
     misc_feature    64..450
                     /gene="LOC139842759"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtgtgtag gagttttgta ttgtagaagt tttcttggga gtatgtttag aagtcctgca
       61 gtggatatat atgctactat ctccacagac cttcttcaca caatccttca aaaagacgcc
      121 acagcaaaga aagcctggga caggctggac gaaatcttta gcgacaacaa acactcccgt
      181 gctctagctc ttgacattca attcatgaat atcaagcttg ataatttctc atccgtctct
      241 gcctactgtc aggaaataaa aatgattgct gaccaaatct caaatgttag tgaacctgta
      301 atagataaac gaatggtcct tcaactaatt agcgggctga atgatgctta tgatgtcatc
      361 ggatcacaaa ttcaacatgc caaagagtta cctaaattct acgaagcaag atcaatgctg
      421 attttagaag aaaacagaaa gaatcggtcc tctaacaccg tcacagcctc atctgaaact
      481 gcccttatcg ctacagtgaa caacaaagtt aatcgacaac accaaaaccc taacgatcgt
      541 accaatttta ctaattctta g
//
LOCUS       XM_071832869             732 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable E3 ubiquitin ligase
            SUD1 (LOC139842761), mRNA.
ACCESSION   XM_071832869
VERSION     XM_071832869.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..732
                     /gene="LOC139842761"
                     /note="probable E3 ubiquitin ligase SUD1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139842761"
     CDS             1..732
                     /gene="LOC139842761"
                     /codon_start=1
                     /product="probable E3 ubiquitin ligase SUD1"
                     /protein_id="XP_071688970.1"
                     /db_xref="GeneID:139842761"
                     /translation="MVKQLVLALLDGVINADFNASGSSSSSVLSASSLTSDSGANSYA
                     NSSKNIVSNSNDDDDDEDGDVCRICRNSGDVDNPLRYPCVCSGSIKFVHQDCLLRWLN
                     HSNAPKCEICEHPFLISPVYAENAPANLTYNDFVIGISTKIYHVLQFIPRLTFVLFMW
                     LVHIPFYTFWVCRFSFVTSFGECMKLYRSHHGALLTDCLHGFLLSAIIMCIYVSLMDY
                     FIDLLGDDGGWWRVDFKIFRCCRSY"
     misc_feature    193..>495
                     /gene="LOC139842761"
                     /note="E3 ubiquitin-protein ligase DOA10
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: SSM4; COG5183"
                     /db_xref="CDD:227510"
     misc_feature    193..342
                     /gene="LOC139842761"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH6 (MARCH6); Region:
                     RING_CH-C4HC3_MARCH6; cd16702"
                     /db_xref="CDD:438362"
ORIGIN      
        1 atggtcaaac aactggttct ggcgttactc gacggagtca tcaacgccga cttcaatgca
       61 tcgggatctt cgtcatcatc tgtactttct gcttcaagtt taacatcaga tagtggagct
      121 aattcgtatg caaatagtag caaaaatata gtatcaaata gcaatgacga tgacgatgat
      181 gaagacggcg atgtttgccg gatctgtcgg aattctggtg acgtggataa tccgttacgg
      241 tatccgtgtg tttgtagcgg tagtattaag tttgttcatc aggattgcct tttacggtgg
      301 cttaatcaca gcaacgctcc caagtgtgag atttgcgaac atccattttt aatttcacct
      361 gtgtatgcag agaatgcccc tgcaaatctt acttataacg attttgtaat tgggatctca
      421 acgaaaatct atcacgtgct gcagttcatt ccgcgtctca cttttgtact ttttatgtgg
      481 cttgtgcaca tacccttcta tactttctgg gtttgccgct tctcgttcgt tacaagtttt
      541 ggcgaatgta tgaaacttta taggagtcat cacggggctt tgcttaccga ctgtctgcat
      601 gggttcttac tctcagctat tatcatgtgc atatatgttt cattgatgga ttactttata
      661 gatttactag gagatgatgg aggttggtgg agagttgatt ttaagatttt cagatgttgc
      721 agatcgtatt ga
//
LOCUS       XM_071832870            1488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842764), mRNA.
ACCESSION   XM_071832870
VERSION     XM_071832870.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1488
                     /gene="LOC139842764"
                     /note="uncharacterized LOC139842764; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 26
                     Proteins"
                     /db_xref="GeneID:139842764"
     CDS             1..1488
                     /gene="LOC139842764"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688971.1"
                     /db_xref="GeneID:139842764"
                     /translation="MAIVVRFVDQDGYIKERFLDLVHVKDTSALTLKNEILASLSFHK
                     LDVQDIRGQGYDGASNMRGEWKGLQALILKECPYAYYIHCFAHQLQLALVSASKEVVE
                     VHKFFKNMNFIINVLDSSSKRHDQLQDAQISELAHLAEIGELESGKGANQIKSLQRPG
                     DTRWSSHYRSICSLLKLYGPAIVVLREIATNGSTPSQKGDASFALTELLSFDFVFIMH
                     LMKKIMKRTDKLCQAFQRKSQDIVNALSLISTTKMLIQKLRDQSWQSLLNKVVGFCES
                     NSIRVPKMTKTYKDIVRSRSKKDDVTVEHHYRVDVFIAAVDSQLQELNSRFSESVTEL
                     LQLSVALDPRKSFNKNDIYKLVKTFYPLDFTEQEIIQLKHELQHYELDVPNHPELKKV
                     QTIAELCRGLQETNRSEVYPLLDRLIRLILTLPVSTATSERAFSSMKIVKTRLRSSMS
                     DDFLKHCLILYIERDIAETFSIDEIIDDFSFNKPRRVRLQMPKVF"
     misc_feature    <1..201
                     /gene="LOC139842764"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    <1267..1398
                     /gene="LOC139842764"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggcaattg ttgtgagatt tgttgatcaa gatgggtata ttaaagagag gtttttagac
       61 ttggttcatg taaaagatac aagtgcatta actttaaaaa atgaaatttt ggcttcttta
      121 tcttttcata agcttgacgt tcaggatatt cgaggacaag gatatgatgg agctagtaac
      181 atgcgcggag aatggaaggg tttgcaagct ttaatcttga aggaatgccc gtatgcatat
      241 tacattcatt gttttgctca tcagttacaa ctagctttag tttcggcatc taaagaggtg
      301 gttgaagtgc ataaattttt taagaatatg aactttatta ttaatgtcct tgattcttct
      361 tccaaacgtc acgatcaatt acaagatgca cagattagtg aacttgcaca tttggccgaa
      421 attggagagc ttgagagtgg caaaggagca aaccaaatta aaagtttaca aagacctgga
      481 gatacaagat ggagttcaca ttatcgatcg atatgtagtt tgttgaagtt gtatggtccc
      541 gccattgtag tgctacgtga aattgctacg aatgggtcta ctccatcaca aaaaggtgat
      601 gcttcttttg ctcttacaga attattgtca tttgattttg tttttattat gcatttgatg
      661 aagaagataa tgaaaagaac tgataagctt tgtcaagctt ttcaacgtaa gtctcaggat
      721 atagttaatg ctttgagttt gatttccacc actaagatgt tgattcaaaa actgagggat
      781 cagagttggc agtcactttt gaataaagtt gttggttttt gtgagtcgaa tagcattcga
      841 gttcctaaaa tgacaaaaac atacaaagac atagttcgat ctcgttcaaa aaaagatgat
      901 gtaactgttg aacatcatta tcgagttgat gtgttcattg ctgctgttga tagtcaattg
      961 caagagttga actctagatt cagtgagtcc gtaacagaac ttcttcaact cagtgttgct
     1021 ttggacccga gaaaatcttt caacaaaaat gatatttaca aattagtaaa aaccttctat
     1081 cctttagact ttacggagca agaaattatt cagctaaaac atgaattgca acattatgag
     1141 ctagatgttc ctaatcatcc tgagttaaaa aaggttcaaa cgattgctga gttatgtaga
     1201 gggctacaag aaactaatag atcagaagtg tatcctttgc ttgatagatt gattcgtctt
     1261 atattaactc ttccagtatc aaccgcgaca agtgaaagag ctttctcatc aatgaaaatt
     1321 gttaaaacaa gacttcgtag cagcatgagt gatgattttc ttaaacattg tctgattctt
     1381 tacattgaaa gggatattgc agaaacattt tctatagacg agataataga tgatttctct
     1441 ttcaataaac ctagacgtgt tcgacttcaa atgcccaagg tattttaa
//
LOCUS       XM_071832871             924 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842765), mRNA.
ACCESSION   XM_071832871
VERSION     XM_071832871.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..924
                     /gene="LOC139842765"
                     /note="uncharacterized LOC139842765; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842765"
     CDS             1..924
                     /gene="LOC139842765"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688972.1"
                     /db_xref="GeneID:139842765"
                     /translation="MGQKRTMFDFFKPTNVDNHQSQQEVNNIMEDIASNPQSRLNDDN
                     IMEESPRVEIEKNNTSKLGDFNLDSLVRDPGLRPSFMDYPINQHGEIRRAYIKHGPYQ
                     LHKSKYVQSSFGSNSGNRSFQQAWFSKFWWLEYSEVTDAAYCFPCYLFYKKPIGRAGS
                     DTFIKQGFRNWKKVNCGQDCSFIKHEGKTPASAHNYSVKCYEDLKNQLGSIENVIEKQ
                     STQEIIDNRLRVRTSVEIIKWLTMQACALRGHDELPDSTNRGNFLELMKLIASYNKEV
                     DKVVLENAPKNATYTSPDVQKEILQIFATNV"
     misc_feature    481..>921
                     /gene="LOC139842765"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
ORIGIN      
        1 atgggtcaaa aaagaacaat gtttgatttt ttcaagccga caaatgttga taatcatcag
       61 tcgcaacaag aagtaaataa tattatggaa gatattgcta gtaacccaca atcacgtttg
      121 aatgatgata atattatgga agaatctcct agagttgaaa ttgagaaaaa taacacatcc
      181 aagttagggg atttcaattt ggattcattg gttcgagatc caggtttgcg accttctttc
      241 atggattatc caatcaatca acacggcgag atcagaagag cgtatattaa acatgggcct
      301 tatcaacttc ataagtcaaa gtatgttcaa agttcgtttg gctcaaatag tggtaatcga
      361 agctttcaac aagcttggtt tagtaaattt tggtggttag aatattccga ggtaactgat
      421 gctgcatatt gttttccatg ttacttattt tataagaagc ctattggacg agcaggttcc
      481 gatacattca tcaagcaagg gttccgaaat tggaaaaaag taaattgtgg ccaagattgt
      541 tcttttatca aacacgaagg taaaactcca gcttcagctc ataattattc agtgaaatgt
      601 tatgaagatt taaaaaacca attaggtagt atcgagaatg tgatagagaa acaatcaact
      661 caagagatca ttgataacag gctccgtgtt agaacttccg ttgagataat taaatggctc
      721 acaatgcaag cttgtgctct tagaggtcat gatgagctac ccgattcaac aaatcgagga
      781 aattttcttg aattaatgaa gttaattgct tcttataaca aggaagttga taaggttgtg
      841 ctagaaaatg ctcctaaaaa tgccacgtat acttcaccgg atgtgcaaaa agaaattttg
      901 caaatttttg ctacaaatgt ataa
//
LOCUS       XM_071832873             600 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides thioredoxin M3,
            chloroplastic-like (LOC139842766), mRNA.
ACCESSION   XM_071832873
VERSION     XM_071832873.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..600
                     /gene="LOC139842766"
                     /note="thioredoxin M3, chloroplastic-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842766"
     CDS             1..600
                     /gene="LOC139842766"
                     /codon_start=1
                     /product="thioredoxin M3, chloroplastic-like"
                     /protein_id="XP_071688974.1"
                     /db_xref="GeneID:139842766"
                     /translation="MAAAFSSCVYSCATHSSIPKLSQLSSQRHFKTSYPFSFGVPKNR
                     SCLRVLSTLQKSKLSDITSQESWNPMILKIEKLVLVKFYTSWCEPCQRVQEVIDEIII
                     DYAEKLKCVAVNVEQELQVAEEYGIKAVPVVMLFKNGEKCESVIGTMPKEFFVATIER
                     VLGLFEVEMSSDAFQLLGMSEMGMIPSVFASRHPLVVTN"
     misc_feature    178..486
                     /gene="LOC139842766"
                     /note="Chaperedoxin CnoX, contains thioredoxin-like and
                     TPR-like domains, YbbN/TrxSC family [Posttranslational
                     modification, protein turnover, chaperones]; Region: CnoX;
                     COG3118"
                     /db_xref="CDD:442352"
ORIGIN      
        1 atggctgctg ctttttcttc ttgtgtttac tcttgtgcaa ctcattcttc aattcccaaa
       61 ttatcgcaat tatcatcaca acgacacttt aaaacgtctt atcctttctc ttttggggtc
      121 cctaagaatc gatcttgtct tcgcgttctc tctacgcttc agaaatctaa attgtcagat
      181 ataacatcac aagaatcatg gaaccctatg attttgaaga ttgaaaagct agtacttgtt
      241 aagttctaca ctagttggtg tgaaccatgc cagagggttc aagaagtgat agatgagatc
      301 atcattgatt atgccgaaaa gctcaagtgt gttgcggtta atgtggagca ggagttgcag
      361 gttgcggagg aatatggcat aaaggctgtg cctgtggtta tgttgtttaa aaatggtgag
      421 aaatgtgagt ctgtgattgg gaccatgcca aaagagttct ttgtggctac cattgaaaga
      481 gtcttggggc tgtttgaagt tgaaatgagt agtgatgctt ttcaacttct tggtatgagt
      541 gaaatgggga tgatcccttc tgtatttgct tcaaggcatc cattagttgt tactaattag
//
LOCUS       XM_071832874            1974 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842767), mRNA.
ACCESSION   XM_071832874
VERSION     XM_071832874.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1974
                     /gene="LOC139842767"
                     /note="uncharacterized LOC139842767; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139842767"
     CDS             1..1974
                     /gene="LOC139842767"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688975.1"
                     /db_xref="GeneID:139842767"
                     /translation="MSLDEVVGCNQSAFIPGRRISDNILLTQELMKDYHTNRGVARCA
                     FKVDIQKAYDTVDWGFLECALRCFGYPDTMVKWIMTCVSSTSFSIAVNGDLHGYFKGK
                     RGLRQGDPMSPYLFTLVMEVLSLLLQKRLKEGSIFRFHPKCEKLKIINLCFGDDLFLF
                     SHANVDYVRVIAESLNEFKLCSGLVPSMTKSTAFFANVSQQLKEVILAILPFEEGKLP
                     VKYLGVPLVSSSLLYRDCRVLVDRDEYSLSISVLTSMPLYWQSVFIIPDAIIKEIEAL
                     MRGFLWCQGELSRGKAKVKWSTICLPKDEGGLGVKRLKEWNIALMVSHIWRLITNKHS
                     LWVKWIHEYRLKGMSFWDAPCVAGASVGWRKLLAIRGIVRDRFIIQIGDGRMAFAWHD
                     TYSDNGPLISFISNRDITRAGFSRQSKVHDICVDGMWTWPNEWVVKYPLLSNMSAPSL
                     VDSPDKIRWRKYNGDLQDFYVGAVWESIRHRQGKVPWYNIVWFANCIPKHAFITWLLM
                     GEKLKTQDKLQTWETRFHSGISSVCSLCSQVADSHSHLFFECSFASQIWNYSKSLSNV
                     AMGGSQWQDVVACIGQMAAQKTSHLIVAKLLFGASVYFIWQERNRRLFSKKAMGCEKV
                     KELIYSTVRMKIMAISWKNTKNVQTMKANWKIH"
     misc_feature    7..678
                     /gene="LOC139842767"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(142..159,319..324,457..459,463..468,664..669)
                     /gene="LOC139842767"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(142..159,319..321,463..465)
                     /gene="LOC139842767"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    322..324
                     /gene="LOC139842767"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    1405..1668
                     /gene="LOC139842767"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagccttg atgaggtggt gggttgtaat caatcggcat tcattcccgg aaggaggatt
       61 tcagataaca ttcttcttac gcaggaattg atgaaggact atcatacgaa taggggtgtt
      121 gcgcgttgtg cgtttaaggt ggatatccag aaagcgtatg atacggttga ctggggtttt
      181 ttggagtgtg ctctgcggtg ttttggttac ccggatacta tggttaaatg gatcatgacg
      241 tgtgtctcgt ctacttcctt ttcgattgca gttaacgggg acctccatgg ttactttaaa
      301 ggtaagcggg gtctcaggca aggggaccct atgtctcctt atctatttac gttagttatg
      361 gaggtattgt cgttattgct tcaaaagcgg ttaaaggagg gaagcatatt tcgttttcac
      421 cctaaatgtg agaagctgaa gattattaat ctatgctttg gggacgatct atttctcttc
      481 tctcacgcca atgttgatta tgttagggtt attgctgagt ccctgaatga gtttaaactt
      541 tgttctgggc ttgttccgag tatgactaag agcaccgctt tctttgctaa tgtctctcaa
      601 cagttgaagg aggttattct ggccatttta ccatttgaag aagggaagct tccggttaag
      661 tatttgggtg tacccttagt gtcatcaagt ttattatacc gcgattgtcg tgtcctggtg
      721 gatcgggacg agtacagctt atccatatct gttcttacct ctatgccatt atattggcaa
      781 tctgtattta ttatccctga tgctattata aaagaaattg aagctcttat gagaggtttc
      841 ctttggtgtc aaggggaatt atctagaggc aaggcgaagg ttaaatggtc gactatttgt
      901 cttccaaagg atgaaggtgg gttgggcgtt aaacgattga aagagtggaa tattgctttg
      961 atggtctctc atatttggcg tctcatcacg aacaaacact cgttatgggt taaatggatc
     1021 catgagtacc gtcttaaagg gatgagtttt tgggatgctc catgtgttgc aggagctagt
     1081 gtggggtggc gaaagttact agctataaga ggtatagttc gtgaccgatt cattattcag
     1141 ataggagatg gcagaatggc gtttgcatgg catgacactt atagtgataa cggtcccctt
     1201 atctcgttca ttagtaatag ggatatcact cgagccgggt ttagcagaca atcgaaggtg
     1261 catgacattt gtgtagatgg tatgtggacc tggccaaacg aatgggttgt caaatacccg
     1321 ttattatcga acatgagtgc tccttctctt gttgatagcc cggataaaat tagatggaga
     1381 aaatataatg gtgacctgca agatttttat gtgggtgctg tgtgggagtc tattcgtcac
     1441 cgtcaaggga aagttccatg gtataatatt gtgtggttcg ctaattgtat tccaaaacac
     1501 gcgtttatca catggttact catgggggag aagctcaaga cgcaagacaa attgcaaaca
     1561 tgggagacga ggttccactc gggtatttca agcgtgtgct cgttatgttc acaggtagct
     1621 gattcgcact cacatttgtt ttttgagtgc tcatttgcgt ctcagatttg gaattatagt
     1681 aaaagcctct caaatgttgc gatgggtggt tctcaatggc aagatgtagt cgcttgtatt
     1741 ggtcaaatgg ctgctcaaaa gacgtcgcac ttgattgttg cgaaactgtt atttggagca
     1801 tcggtttatt ttatatggca ggaaaggaac agaaggcttt tttctaagaa ggctatggga
     1861 tgtgaaaaag tgaaagagtt gatctattct acagttcgga tgaagatcat ggctattagt
     1921 tggaagaata ccaagaacgt ccaaactatg aaagctaatt ggaagattca ctaa
//
LOCUS       XM_071832875            3306 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842768), mRNA.
ACCESSION   XM_071832875
VERSION     XM_071832875.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3306
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3306
                     /gene="LOC139842768"
                     /note="uncharacterized LOC139842768; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842768"
     CDS             1..3306
                     /gene="LOC139842768"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688976.1"
                     /db_xref="GeneID:139842768"
                     /translation="MRLTQLLRWLGRCLVERRSWMDWNTWMYEIGRATAEFMDSVDEF
                     ITVAETDQLEKGNNAICCPCKKCKNARWYADSTDIKSHLIAHGFMRGYTYWSFHGESV
                     AALNPSVSDNDTDNEEDSYNSDNNVNFDDMFDDLDMEDNVADKYHDRLQQLFVDAEKP
                     LYTGCMNFTKLSAVIQLVNLKSNNGWSDTSFTSLLELLNKMLPEGNELSVSTYQAKKL
                     MCPMGLEIQRIHACPNDCMLYRNEDKDLPLCKVCGTSRYKRGKPTDNADSDVSENGPP
                     AKLLSYLPIIPRLKRLFANEKDAKLLRWHAEDRKNDGKMRHVADSLQWKNFDKDFEEF
                     RDEIRNISFGLSSDGINPFGDLSSRHSTWPVLLCIYNLPPWLCMKRKYIMMSLLIQGP
                     KQPGNDIDVYLQPLVDEMMELWSTGIHIYDAYKKEYFQLRAMLFCTINDFPAYGNLSG
                     YSTKGKKACPICEKNTHSIWLTNCKKPAFMGHRRELAENHPYRKKSDLFDSTIEDRKL
                     PPQLDGETTLSKVANINVELGKKGVGPPKGIWKKKSIFWKLPYWKHLRVRHCIDVMHI
                     EKNVCESLIGLLLNIPGKTKDGIKVRRDMELMNIRPELQPKDIDGRSTKFLPPACYTM
                     SKVEKTKFCQCLHGIKVPSGYSANIRKLVSMKDLKLLGMKSHDCHVLMIQMIPIAIRG
                     ILPNRIRHTITKLCLFFNMIHSKVIDPGVLDEYQIDIILTLCELEMYFPPSFFDVMVH
                     LVSHIVGEIKVCDPVFLRYMYPFERYMGILKGYVRNLNRPEGSIVEGYASEEVIEFCT
                     NYMDGFKSVEIPQSRHEGRLSGQGILGRKTGYSNVSDYQEAHFNVLQHTTSIDPFIQE
                     HMSFLRQQYPKKSAKWLANQHKKTFSEWLKDKVRRTLPNIDKTVEALGFAPKHVFQYQ
                     GYDINGYTFYTKAQDKKSKTQNSGVTVIASSMEFTMVNREERSRIAKKSYYGVIQEIW
                     ELDYGDSYTIPLFKCKWVANDRGVQVDEDGFTTVNLSTNGYKEEPFILAKLVTQVFFI
                     EDPKDPRWHVVQYGKWLIVGVENVVDEDEYDQFDELPPFSVGVQALNEVVAGNNTIYF
                     REDHEEGDEVADI"
     misc_feature    73..300
                     /gene="LOC139842768"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    934..1566
                     /gene="LOC139842768"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    2104..2439
                     /gene="LOC139842768"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    2914..3123
                     /gene="LOC139842768"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgaggttaa cacaattgct tagatggtta ggacgttgct tggtagagag gaggtcgtgg
       61 atggattgga atacttggat gtacgagata ggtcgagcta ccgctgagtt tatggatagt
      121 gtagatgaat ttattacagt tgccgagact gatcaactag aaaaaggaaa caacgcaatt
      181 tgttgtcctt gtaagaaatg caaaaatgca cggtggtatg ctgattcaac cgatatcaaa
      241 agtcatctaa ttgcacacgg atttatgaga gggtacacat attggtcttt tcatggtgag
      301 tcagtagctg cccttaaccc gtctgtttcg gataacgata ccgataatga agaagattca
      361 tacaatagtg acaataatgt taattttgat gacatgtttg acgatttgga tatggaggat
      421 aatgtcgctg ataagtatca tgacagatta caacaactat ttgttgacgc tgaaaaacct
      481 ttatataccg gttgtatgaa ttttacaaaa ctttccgccg tgatacaact ggttaactta
      541 aaatcaaaca atggttggag cgacacaagt ttcactagcc tgttagagtt gttgaacaaa
      601 atgctaccag aaggtaatga gttgtcggtt tcaacatacc aagcaaagaa attaatgtgc
      661 ccaatgggat tggaaataca gagaatacat gcttgtccaa atgattgtat gttatacagg
      721 aatgaagaca aagacctacc tctatgtaag gtatgtggta catctaggta taaacgtgga
      781 aaaccgactg ataatgctga tagtgatgtg tcggaaaatg gacctcctgc aaaattattg
      841 tcgtacttgc ctatcatacc acgattaaag agactatttg cgaatgagaa agatgcaaaa
      901 ttattgcgtt ggcatgctga agatcgtaaa aatgatggta aaatgcgaca tgtggccgat
      961 tcacttcaat ggaaaaattt tgataaagat tttgaagaat ttagggatga gatacgtaat
     1021 ataagtttcg gactcagttc agatggaatt aatccgttcg gagatttgag tagccgtcac
     1081 agcacgtggc ctgttcttct atgcatttat aacctaccgc cttggctatg tatgaaaaga
     1141 aaatacataa tgatgtctct tttgattcaa ggcccaaagc aacctggaaa cgacattgat
     1201 gtatatttgc aaccattagt tgatgaaatg atggaattat ggagtaccgg catacacatt
     1261 tatgatgcat acaagaaaga atacttccaa ctacgggcaa tgcttttttg caccattaat
     1321 gattttcctg cttatggtaa cttgtctgga tatagtacga aggggaaaaa ggcatgtcct
     1381 atttgtgaga aaaatactca ctcgatatgg ctcacaaatt gtaagaaacc tgcatttatg
     1441 gggcatcgga gagagcttgc cgagaatcac ccgtaccgta aaaagtcgga tttatttgat
     1501 agtactatag aggatagaaa actaccacca caattggatg gagaaactac actctccaaa
     1561 gttgctaata taaatgttga gttgggaaag aaaggggttg gtcctcccaa aggtatttgg
     1621 aagaaaaagt ctattttttg gaaattaccc tactggaagc atttacgagt ccgacattgt
     1681 attgatgtta tgcatattga gaaaaatgtt tgtgaaagtt tgatagggtt actgttgaac
     1741 attcctggaa aaacaaaaga tggaattaaa gttagaaggg acatggaatt aatgaatatc
     1801 agaccagagc tacaacctaa agatattgat ggaaggtcca ccaagtttct tcctccggcc
     1861 tgttatacta tgtcgaaggt cgagaaaact aaattttgtc aatgtttaca tggtattaag
     1921 gttccatcag gatactctgc taacattagg aagttggttt cgatgaaaga tttgaagtta
     1981 cttggtatga agtcacatga ttgtcatgta ctaatgatcc agatgattcc tatcgcaatt
     2041 cgtggaattc tacccaaccg tattcgacac acaattacaa aactatgctt atttttcaac
     2101 atgattcatt caaaggtgat tgatcctggt gtgctggatg aatatcaaat agatatcata
     2161 cttactcttt gcgaactcga gatgtacttt ccaccttctt tctttgatgt catggttcat
     2221 ttggtatctc atattgtagg agaaataaag gtatgtgatc cagttttctt acggtatatg
     2281 tatccatttg aaagatatat gggtatcttg aaaggttatg taaggaacct taatcgacca
     2341 gaaggcagta tcgttgaagg atatgcatcc gaagaggtga tcgaattctg cacaaactat
     2401 atggatgggt ttaaaagtgt cgagattcca caaagtcgtc atgaaggaag actatcaggt
     2461 caagggatac ttgggcgcaa gacgggatat tcaaatgttt ccgattatca agaggcacat
     2521 tttaatgtct tacaacacac tacatctatt gatccgttca tacaagaaca catgtcgttc
     2581 ttgagacaac aataccctaa aaagagtgca aagtggttgg caaatcaaca taaaaaaact
     2641 ttttcagaat ggttgaaaga caaagttagg aggacacttc caaatattga taaaacggtc
     2701 gaagctttgg gattcgcccc taaacatgtg ttccaatatc aaggatatga cataaatggg
     2761 tatacctttt acactaaagc tcaagataag aagagtaaaa cccaaaacag tggtgtcacg
     2821 gtgatagcct cgtcgatgga attcaccatg gtcaatcgtg aagaaagatc aaggatcgcc
     2881 aaaaaatcgt attatggtgt cattcaagaa atatgggaat tagattatgg tgattcgtac
     2941 actataccct tgttcaagtg taagtgggtt gctaatgatc gcggtgttca agttgatgaa
     3001 gatggtttta caactgttaa tctttccacc aatggatata aagaagaacc attcattcta
     3061 gcaaaactag ttactcaagt attctttatc gaagacccaa aggatcctag atggcatgtg
     3121 gttcagtatg gaaaatggct gattgttggt gtcgagaacg ttgttgatga ggatgagtac
     3181 gaccaatttg acgagttacc gccattttca gtcggtgttc aagctttgaa tgaagttgtt
     3241 gctggaaata atacaatcta ctttagagaa gaccatgagg aaggagatga ggttgcagac
     3301 atataa
//
LOCUS       XM_071832877             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842770), mRNA.
ACCESSION   XM_071832877
VERSION     XM_071832877.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139842770"
                     /note="uncharacterized LOC139842770; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842770"
     CDS             1..501
                     /gene="LOC139842770"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688978.1"
                     /db_xref="GeneID:139842770"
                     /translation="MWKIYREREIRSQTYKTTCYDYQRRVYKVQSTYQRSGEGGTDYT
                     IRFAARKCSCGRWQHKRLPCSHAISVCSHLHEDATVLGSKKYTTTVWRQQYSHFFNPL
                     RDMSYWATIERKIKADPTRLIKHRGRKKSKRFSGQMDEREKQKPKCGICREEGHNRNT
                     CPTRFP"
     misc_feature    148..231
                     /gene="LOC139842770"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atgtggaaaa tctatcgcga acgagaaata agatcccaaa catacaaaac aacatgttac
       61 gattaccaaa gacgtgtgta caaggtacag tcaacttatc aaagaagcgg tgaaggtggc
      121 accgattaca ccataaggtt tgctgctaga aagtgttcat gtggaagatg gcaacacaaa
      181 agattacctt gctctcatgc catttctgtt tgtagccatc tacatgaaga tgcaactgtg
      241 ttgggtagta aaaagtacac aactactgta tggagacaac aatatagcca tttctttaat
      301 ccactcagag acatgagtta ttgggcaacg attgaaagga aaattaaggc tgatccaacc
      361 agattgatca agcacagggg aaggaagaaa tcgaaacgtt tttcgggcca gatggatgaa
      421 cgtgaaaagc agaaaccaaa gtgtggtatc tgcagagaag aaggccacaa cagaaataca
      481 tgtcctacta ggtttccata g
//
LOCUS       XM_071832878             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842771), mRNA.
ACCESSION   XM_071832878
VERSION     XM_071832878.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139842771"
                     /note="uncharacterized LOC139842771; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842771"
     CDS             1..813
                     /gene="LOC139842771"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688979.1"
                     /db_xref="GeneID:139842771"
                     /translation="MWAEKKLGHFMRSLPRDIFKACGLSNKGKLVRPSGQFAAEREPL
                     LGLATSDTSNKEELCYKDVIRSRSKEDNVTVEHHYRVEEFFAAIDSQLQELNSRFNES
                     VTEILRLSVALDPKKPFNKYDICNLAKKKNYPLDFTEQENIQMKHELQHYELDVPNHP
                     QLKNARTIAELCKGLQETGKNEIYPLLDRLIRLIFTLPVSTSTSESGFSVMKIVKTSL
                     RCSMGDDFLKSCLLLYIEKDIVDIFTTDEIIDAFASQKRRRVQLIPHKVQFL"
     misc_feature    <550..717
                     /gene="LOC139842771"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atgtgggctg aaaagaagtt gggtcatttc atgagaagcc tacctagaga tattttcaag
       61 gcatgtgggt tgagcaacaa aggaaagttg gtacggccgt cagggcaatt tgcggcagag
      121 agggaacctc ttttggggtt ggcgacgtca gacacaagta acaaagagga attgtgttac
      181 aaagacgtaa ttcgttctcg ttctaaagaa gacaatgtga ctgttgagca tcattatcga
      241 gttgaggaat tctttgctgc tattgatagt caattgcaag agttgaactc tagattcaat
      301 gagtctgtga ctgaaattct tcgactcagt gttgctctag accctaaaaa gcccttcaat
      361 aaatatgata tttgcaatct agcaaaaaaa aaaaattatc ctttggactt tacagagcaa
      421 gaaaatattc agatgaaaca tgagttgcaa cattatgagc tagatgttcc taatcatcca
      481 cagttaaaaa atgctcgtac gattgcagag ttgtgtaaag gcctacaaga aactgggaag
      541 aacgaaatct atccgctgct tgacaggttg atccgtctta tatttactct tccagtttca
      601 acttcaacaa gtgaaagtgg tttctcggta atgaaaattg tgaaaactag tcttcgttgt
      661 agcatgggtg atgactttct gaaaagttgt ttgctactat atattgaaaa agacattgta
      721 gatatcttta ctacagatga gataattgat gcttttgctt ctcaaaaacg tcgacgtgtc
      781 caacttatac cacataaggt acaattcctt taa
//
LOCUS       XM_071832879             654 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides presequence protease 1,
            chloroplastic/mitochondrial-like (LOC139842772), mRNA.
ACCESSION   XM_071832879
VERSION     XM_071832879.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..654
                     /gene="LOC139842772"
                     /note="presequence protease 1,
                     chloroplastic/mitochondrial-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842772"
     CDS             1..654
                     /gene="LOC139842772"
                     /codon_start=1
                     /product="presequence protease 1,
                     chloroplastic/mitochondrial-like"
                     /protein_id="XP_071688980.1"
                     /db_xref="GeneID:139842772"
                     /translation="MAGAVLLRSITSRASHACVRSFYRSSHRLIPNFHRRSQLRHNIS
                     SALPSHIQFSSRFSHISPKSIATSPQYSTDAIGVNDEAAKKLGFEKVYELKMKQETPD
                     QSQALKSVHSLSLHDIPKPIQIPIEVGEINGVKVLQHDLETEDFLYCDTVFDMSSLKQ
                     ELIPLVPLFCQSLLKLGTEDLLSQLIRRHTYGTSIFPFTSSKRGSDTPVSHTPSVPN"
     misc_feature    235..>615
                     /gene="LOC139842772"
                     /note="Peptidase M16C associated; Region: M16C_assoc;
                     pfam08367"
                     /db_xref="CDD:462447"
ORIGIN      
        1 atggcgggag ctgttcttct tcgctctatt acctcacgtg cgtcacatgc atgtgtacgt
       61 tccttctacc gttcttctca ccgtcttatc cctaatttcc accgccgttc tcaactccgc
      121 cacaacatct ccagcgccct tccgtcgcac atccaattca gctctcgttt ctctcatata
      181 tctcccaaat caatcgcaac atctccacag tattctactg atgctattgg tgttaatgat
      241 gaagctgcca aaaagcttgg atttgagaag gtatatgagc taaagatgaa gcaagaaact
      301 cctgaccaat cacaagcttt gaaaagtgtt catagcctat ctcttcacga cattcctaaa
      361 cctattcaaa tccctattga ggttggagaa atcaatggag tgaaagtatt gcagcatgat
      421 cttgaaacgg aggattttct ttactgtgat acagtatttg atatgagttc tctgaagcaa
      481 gaactaattc ctctggttcc actcttttgt caatcattgt tgaaattggg aacagaagac
      541 ctgcttagtc agttaattag aaggcataca tacggcacat ccatatttcc ttttacatca
      601 tcaaaacgtg ggtcagacac tccggtcagt catactccct ccgtccccaa ttaa
//
LOCUS       XM_071832880             891 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842773), mRNA.
ACCESSION   XM_071832880
VERSION     XM_071832880.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 50% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..891
                     /gene="LOC139842773"
                     /note="uncharacterized LOC139842773; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842773"
     CDS             1..891
                     /gene="LOC139842773"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688981.1"
                     /db_xref="GeneID:139842773"
                     /translation="MESIQMITSPSPSTVFDFNYDNSGSTTPYATAPSSPQSTIPFTW
                     EEKPGIPKQNDDFKEDDDTDFAFGCLERHSISAADELFDCGKIKPLKPPPGLHTSNDS
                     PKSPKSPKLRFKEALSPRSRKKDFDPFSEALKQTAGESKEHEDKQMGRGRTTETSRRK
                     VSRSLSPFRTARVVNDRENSTDKSLPTNLTWYNKWNLKNLLLFRSASEGSVTTRKDSL
                     KKYMLLKKNQTFSFRSTDSCDSIKVSTDKNDFTVAKEEATKKANNLPYKSGLMGCLRF
                     NQNARSVHEFSQGINSFMKG"
     misc_feature    232..759
                     /gene="LOC139842773"
                     /note="Protein of unknown function (DUF1645); Region:
                     DUF1645; pfam07816"
                     /db_xref="CDD:429678"
ORIGIN      
        1 atggaatcca tacagatgat cacatctcca tcaccatcaa ccgttttcga cttcaattac
       61 gacaacagcg gctccacaac accgtacgcc accgcacctt caagtcctca atccaccatc
      121 ccattcacat gggaagaaaa accaggcatt ccaaaacaaa acgacgattt caaagaagac
      181 gatgatacag acttcgcatt cgggtgtctc gaacgacatt cgatatcagc agctgatgag
      241 ttattcgatt gtggcaaaat caaaccatta aaaccaccac caggtttgca tacctcaaat
      301 gactcgccta aatcacctaa gtctccgaaa ttaagattta aagaagcgtt gtctccgcgt
      361 agtaggaaga aagattttga tcctttttca gaggcattaa aacaaacagc cggtgaaagt
      421 aaagaacatg aagataagca aatgggacga ggtcgaacga ctgaaacgag cagacggaaa
      481 gtgtcgagat cgttatcgcc ttttagaacc gctcgcgttg taaatgacag ggaaaactcg
      541 accgataaat cgttgccaac gaatttaaca tggtacaata agtggaactt aaagaatttg
      601 ttattatttc gaagtgcatc agaaggaagt gtgacaacaa gaaaggattc attgaagaaa
      661 tatatgttgt tgaaaaagaa tcaaactttt agttttagaa gcactgatag ctgcgattcg
      721 attaaagtat cgacggataa aaatgatttt acagtcgcaa aggaggaggc aacaaagaag
      781 gctaataatt taccatacaa atcagggtta atgggttgtt taaggtttaa tcaaaatgca
      841 agaagtgttc atgagttttc tcaagggatt aattcattta tgaaaggatg a
//
LOCUS       XM_071832881             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842774), mRNA.
ACCESSION   XM_071832881
VERSION     XM_071832881.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139842774"
                     /note="uncharacterized LOC139842774; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842774"
     CDS             1..903
                     /gene="LOC139842774"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688982.1"
                     /db_xref="GeneID:139842774"
                     /translation="MADKQPFHPALTISNIKNLIPITLELNNSLYNSWSRLFKLHCTT
                     YGVLDHIIPPIDDSSSSDTTNTTNPNQDPQWLRLDAIVLQWIYGTLSTELLNTVMEQD
                     ETTAAAAWQFSTIKLDDFANVSAYCQQLKSLADQLMNVGDKLILEEIRKQKQAINTIG
                     NDTALVTTINSKPEIEQSQSRYNNQRGRGNNMGNYNRGRNSGNRGCGRSNSYQSGAFS
                     QSSLLTWLQRQLPYNNWGYQQNPWTQQIPPCPFPTTNWVRPNTNQAGLLGPRPAQAHN
                     VETSSFCPTELNNALHTMSHTPPD"
     misc_feature    253..>432
                     /gene="LOC139842774"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggcagaca agcaaccctt tcatcctgcc ttaacaatct caaacattaa aaatctcatc
       61 cctataactt tggaactcaa taacagcctt tacaattctt ggtctcgtct gtttaaactt
      121 cactgcacaa cttatggtgt ccttgatcat atcatccctc ccatcgatga ttcttcttct
      181 tcggacacca ccaacaccac caatcccaat caagatccac agtggcttcg attggatgct
      241 attgtattac aatggattta tggcactctt tccactgaac ttctcaatac cgtcatggaa
      301 caagacgaaa ccactgcggc tgctgcttgg caattttcaa caattaagct tgatgatttc
      361 gccaatgttt cagcttattg tcaacaactc aagtctcttg ctgaccaatt gatgaatgtt
      421 ggggataagc ttattttaga agaaatacgc aagcaaaaac aagctatcaa caccatcggc
      481 aacgacaccg ctcttgtaac caccatcaac tcaaaacctg aaattgagca atctcaatca
      541 agatacaata atcaacgagg tcgtggtaat aatatgggta attataatcg ggggcgtaac
      601 agtggtaatc gaggctgcgg tcgaagtaat tcctatcaat ccggtgcttt ctctcaatcg
      661 tcgttactta cttggttaca acggcaacta ccgtacaata actggggtta tcaacaaaac
      721 ccttggactc aacagatccc tccgtgtcca tttccaacaa ctaattgggt taggcccaat
      781 actaaccaag ctggactcct agggcccaga cctgcccaag cacataatgt tgaaactagc
      841 tcattctgtc caactgagct aaataatgct ttgcacacta tgtctcacac gccacctgat
      901 taa
//
LOCUS       XM_071832882            1452 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cyclin-A1-4-like
            (LOC139842775), mRNA.
ACCESSION   XM_071832882
VERSION     XM_071832882.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1452
                     /gene="LOC139842775"
                     /note="cyclin-A1-4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842775"
     CDS             1..1452
                     /gene="LOC139842775"
                     /codon_start=1
                     /product="cyclin-A1-4-like"
                     /protein_id="XP_071688983.1"
                     /db_xref="GeneID:139842775"
                     /translation="MMFFFSCDPKINPSPFHPSNFNSITMFLHVGSKNVDFHGHNTSL
                     SVLSKLGLEIKLLTAAQNAMKQTLQMESSALHSFKFEMKAPTFIYFLTRFVHHAQGVN
                     EKSSTLRDYTQYQPYDWYECVKALHALVKEYPNSTLPPIRQIYYSQHKMVPSRLDSKE
                     AYLNSNLNGNGTGSNVCIREILMETETGEKIVVNLDVDSFCAPLSATIDWQIYQNFRA
                     TEAKDRPKVDYMEEVQEEIDPEKRARLVNFLVGVSDNLELLPHTLYLTINYVDRYLSA
                     VSIDTQSFQLLGVACLMIASKYEEIYPSEMDVFLLMCPDDYKAEDIEKMQYLVLDTLD
                     FDLYVVTVEPFLRRFVLAVAQGVNEEEKAPLKCLAYYISEFSLLEYDMLCYPPSLVAA
                     SAIFLARYVLFPSHKPWNSTLRDYTQYQPSDLYECVKALHALVTECPNPKLPEIRENY
                     SKDEYKCVADKYSCPPTTPLEHFHNISTPQLSY"
     misc_feature    <268..450
                     /gene="LOC139842775"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
     misc_feature    598..1008
                     /gene="LOC139842775"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
     misc_feature    1021..1365
                     /gene="LOC139842775"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
ORIGIN      
        1 atgatgttct tcttctcttg tgaccctaaa ataaacccta gcccctttca tccatcaaat
       61 ttcaattcaa taacaatgtt ccttcacgtc ggcagtaaga acgtcgactt ccatggccat
      121 aatacgtcac tttcggttct cagtaagtta gggcttgaaa ttaaactctt gacagctgca
      181 caaaacgcca tgaaacagac gttgcaaatg gaatcttcgg ctctgcattc cttcaagttt
      241 gaaatgaagg ccccaacatt tatatatttt ttgacaagat ttgttcatca tgctcaaggt
      301 gtaaacgaga aatcatcgac tttaagggat tatactcagt accaaccata tgattggtat
      361 gagtgtgtaa aagctctgca tgcacttgtt aaggaatacc caaattctac cttgccacca
      421 atcagacaaa tttattatag ccaacataag atggtaccaa gtaggctgga ttcgaaggaa
      481 gcgtatttaa attcaaatct taatggtaat gggacgggta gtaatgtgtg cataagagag
      541 atacttatgg agacggagac tggtgaaaag attgttgtaa atctggatgt tgattccttc
      601 tgtgcaccgt tgtctgcgac tattgattgg caaatttatc agaattttag agctactgag
      661 gcaaaggaca ggcctaaagt tgattacatg gaggaggtgc aggaagagat tgatccggaa
      721 aagcgtgcac gtctagttaa ttttcttgtt ggggtatctg ataaccttga actcctgcct
      781 catacattgt atttgactat caactacgta gaccgttacc tttctgccgt ttcaatagat
      841 acacaaagtt ttcaattgct tggtgtggcc tgcctgatga tagcttcgaa atatgaggag
      901 atatatccat ccgaaatgga tgtcttcctc cttatgtgtc ccgacgacta caaagctgaa
      961 gacatagaga aaatgcaata tttggttctg gataccttgg attttgattt gtatgtcgta
     1021 accgttgaac cttttttgag aagatttgtt cttgctgttg ctcaaggtgt aaatgaggag
     1081 gagaaggctc ctttaaagtg tttggcatac tacatatctg aattctctct tttggagtat
     1141 gatatgcttt gttatcctcc ttctcttgtt gctgcatctg ctattttctt agcaagatat
     1201 gtgctttttc catcacacaa accttggaat tcgactctaa gggattatac tcagtaccaa
     1261 ccatcagatt tgtacgagtg tgtaaaagct ctccatgcac ttgttactga atgcccaaat
     1321 cccaaattgc cagaaatcag agaaaattac agtaaagatg agtacaagtg cgtagcagac
     1381 aagtattctt gtcctccaac gacaccactt gagcattttc acaatattag cacacctcag
     1441 ctcagctact ag
//
LOCUS       XM_071832883             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842776), mRNA.
ACCESSION   XM_071832883
VERSION     XM_071832883.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139842776"
                     /note="uncharacterized LOC139842776; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842776"
     CDS             1..813
                     /gene="LOC139842776"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688984.1"
                     /db_xref="GeneID:139842776"
                     /translation="MKLKDKYGRIFRLEQDELATVADRIRWSGSEWVFTWCWTRSPSG
                     RTPAELSEMELEISIMQFHNEHQDSWTWSLSNNSSRHFNTCDLSRIIDDISLNTESAG
                     TETLKNYLLPQKFGIFVWRAKMRRLPVRVELDKRGMDLDSLLCPRCNDTTESVDHALF
                     LCKYVMDIWDRVYNWWNIGHVSNLSVVEAFCGNNNHIKSAKGKQLWQVVEWVTGYMIL
                     RNRNKKAFENKDINEALILNEIQIRSFEWVNKSSKKLRIDWHQWLINPKEAG"
     misc_feature    <331..492
                     /gene="LOC139842776"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaagctta aggataaata tggcagaatt ttccgattag aacaagacga gttagcgaca
       61 gtagctgatc gaattcgatg gtcgggatca gagtgggtct tcacgtggtg ctggacaaga
      121 tcgccatcag gtcgtactcc agcggagcta tcagagatgg aattggaaat tagcataatg
      181 cagtttcata acgaacatca agactcgtgg acgtggtcac ttagcaacaa cagttcgagg
      241 cacttcaaca catgtgactt atccagaata atcgatgata taagcttaaa taccgaaagt
      301 gcaggtacag aaactttaaa aaactatttg ctacctcaaa aattcgggat ttttgtttgg
      361 agagcgaaga tgaggaggct cccggttagg gttgaattgg ataagagagg tatggactta
      421 gattcgttat tatgccctcg ttgtaatgac acaaccgagt ccgttgacca tgcgttattc
      481 ttatgtaaat acgttatgga tatatgggat cgggtttaca attggtggaa cataggacat
      541 gtctcgaatc taagtgtggt ggaagcattt tgtggaaaca acaatcatat caagtcggca
      601 aaaggaaagc aactatggca agtggtcgag tgggttactg ggtacatgat attgaggaat
      661 cgaaacaaga aggcgttcga gaacaaagat ataaacgagg ctctcatact caatgagatc
      721 caaattcgaa gctttgagtg ggttaataag agttcgaaga aattacgcat agattggcat
      781 caatggctaa ttaatccaaa agaagccggt taa
//
LOCUS       XM_071832884             813 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842777), mRNA.
ACCESSION   XM_071832884
VERSION     XM_071832884.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..813
                     /gene="LOC139842777"
                     /note="uncharacterized LOC139842777; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842777"
     CDS             1..813
                     /gene="LOC139842777"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688985.1"
                     /db_xref="GeneID:139842777"
                     /translation="MKLKDKYGRIFRLEQDELATVADRIRWSGSEWVFTWCWTRSPSG
                     RTPAELSEMELEISIMQFHNEHQDSWTWSLSNNSSRHFNTCDLSRIIDDISLNTESAG
                     TETLKNYLLPQKFGIFVWRAKMRRLPVRVELDKRGMDLDSLLCPRCNDTTESVDHALF
                     LCKYVMDIWDRVYNWWNIGHVSNLSVVEAFCGNNNHIKSAKGKQLWQVVEWVTGYMIL
                     RNRNKKAFENKDINEALILNEIQIRSFEWVNKSSKKLRIDWHQWLINPKEAG"
     misc_feature    <331..492
                     /gene="LOC139842777"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaagctta aggataaata tggcagaatt ttccgattag aacaagacga gttagcgaca
       61 gtagctgatc gaattcgatg gtcgggatca gagtgggtct tcacgtggtg ctggacaaga
      121 tcgccatcag gtcgtactcc agcggagcta tcagagatgg aattggaaat tagcataatg
      181 cagtttcata acgaacatca agactcgtgg acgtggtcac ttagcaacaa cagttcgagg
      241 cacttcaaca catgtgactt atccagaata atcgatgata taagcttaaa taccgaaagt
      301 gcaggtacag aaactttaaa aaactatttg ctacctcaaa aattcgggat ttttgtttgg
      361 agagcgaaga tgaggaggct cccggttagg gttgaattgg ataagagagg tatggactta
      421 gattcgttat tatgccctcg ttgtaatgac acaaccgagt ccgttgacca tgcgttattc
      481 ttatgtaaat acgttatgga tatatgggat cgggtttaca attggtggaa cataggacat
      541 gtctcgaatc taagtgtggt ggaagcattt tgtggaaaca acaatcatat caagtcggca
      601 aaaggaaagc aactatggca agtggtcgag tgggttactg ggtacatgat attgaggaat
      661 cgaaacaaga aggcgttcga gaacaaagat ataaacgagg ctctcatact caatgagatc
      721 caaattcgaa gctttgagtg ggttaataag agttcgaaga aattacgcat agattggcat
      781 caatggctaa ttaatccaaa agaagccggt taa
//
LOCUS       XM_071832885             717 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842779), mRNA.
ACCESSION   XM_071832885
VERSION     XM_071832885.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..717
                     /gene="LOC139842779"
                     /note="uncharacterized LOC139842779; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842779"
     CDS             1..717
                     /gene="LOC139842779"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688986.1"
                     /db_xref="GeneID:139842779"
                     /translation="MEELEALSNHYALLFNRRKAKLSTEEKSASDIKLKEVQQMLSLD
                     TVIESEKGKNIENISDNALDEIKSFHSSSVYKYLIWTGGKLDSLYSEGVHRLSEMCCI
                     AVSQLLIIGKSVIQYANKGQNAVDDDEDIVKLDWPEDSIEKAKTIKMKTQLMTEYLEA
                     VAVSFVTGISDVAETYAAAIKSAATADSNEVVPEKSVEGKVKLYSEDLNVNQTTAVGK
                     IQDDLHFLAYVVLSNSMPAA"
ORIGIN      
        1 atggaggagc ttgaagcact atcaaaccat tatgctctgt tattcaaccg gcgaaaagca
       61 aagctgtcaa cagaagaaaa atctgcatct gatataaaac ttaaagaggt ccaacaaatg
      121 ttgagtttag acactgtaat tgaatctgaa aaaggaaaga atatcgagaa tatatctgat
      181 aacgctcttg atgaaatcaa gagttttcac agttcaagtg tttacaaata ccttatctgg
      241 actggtggaa aacttgattc tctttactct gagggtgttc atagactttc agaaatgtgc
      301 tgcattgcgg tttctcaact tctgattatt gggaaatcgg ttatacaata tgctaacaaa
      361 ggccaaaatg ctgttgatga tgatgaagat atcgttaaac ttgactggcc cgaggattct
      421 attgaaaaag ctaaaactat caaaatgaaa acccaattaa tgaccgaata tcttgaggca
      481 gttgcagtta gttttgtcac aggcatatca gatgtagcag aaacgtatgc agcagccata
      541 aaatctgctg ctactgctga ttcaaatgaa gttgtaccag agaaatcagt tgaaggtaaa
      601 gtgaagttgt attctgaaga tctaaatgtt aatcagacca cagctgttgg taaaattcag
      661 gacgaccttc atttcttggc atatgttgtt ctttcaaatt cgatgcctgc tgcttag
//
LOCUS       XM_071832886            3138 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842780), mRNA.
ACCESSION   XM_071832886
VERSION     XM_071832886.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3138
                     /gene="LOC139842780"
                     /note="uncharacterized LOC139842780; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842780"
     CDS             1..3138
                     /gene="LOC139842780"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688987.1"
                     /db_xref="GeneID:139842780"
                     /translation="MDYTIRPIDPDYDLGFIYGCDDLLFTLKIHHGGEFTDAPGREYV
                     NGKVSYIDFIDMDMFSIHELDHLIQDLGYDGFKVIVYHFLRPGSDLDFGLEPLGSDDD
                     VRNMLKYVKESRKKNRVVEMSVYTEHELNPKVIVPEFVSPAGRSKFVLKEIVEEEEIT
                     VKKKPKGKKGKVAKKLVVEGAEVTVSEVPLVPACEVPVVMDEANNVEDDEPLVLSSEV
                     PVVSEVPLDPACEVSVIRDEANNVEDDEPVVLSSEAPVVSEEGVEDDQPEALIESDND
                     DDEDDAEFIVDEENDIFDEFVDMREFVNNIDIDVEYMGNSTKQPTEAQKDDYVDNEVF
                     GIDQFDSDIGDEDDPGFMRKKKIKQLKAQEQERPIGVGTIRFIHGQEFGTKAEVTEAI
                     NLHAVESRRNLVIVKNDKIRVRARCEGVVWKESGQTSKDVKVGETSGTKLKVGNKGKK
                     TNTPTTPNKDKNKKSHHRAKHIECDWVLHVSKEPNADTWVVKTYRDRHDCFESRIIRQ
                     CTSKLLSKQLVDHLQTNPEIPVKAVKAQLEKDLEVKIHPHKAFRALQKARQLIKGSYM
                     DQYGELRDYILELRRSNPGSTVKLEVEDCDTPSSMTRVFKRIYICLGPLKRGFNAIGR
                     DLLGLDGAFMKEPASGFMLTAVGLDSNNGIYPLAYAIVESECYSSWLWFLELLARDLD
                     LTEMSNFTFISDRQKGLIAAVGKVFPVAEHRFCLRHIQQNMKKYWSGVAYKNHLWACA
                     SATTVPQFERRMAEFKDFSEPAHLYLSKIQPAQWARSHFTGRAHSDILLNNHCEVLNR
                     WLCEARDKPIITALEYIRTYLMKRIANVRTTISKSKGPLTPAATKMFDNIKKEAMKCD
                     VIWNGDDKYQVNGHHHDQCVVDMTLRTCSCRKWELTGMPCKHAVAAMLNMSVYSQDVV
                     LESNVHPVYWLSTWEQTYSHTINPVKGKSEWVKSPVPTTLVCPKKIPTAGRPKKNRRK
                     SLEEKDDMVNKGKLSKKGTSIKCSRCGIYGHNVRGCPTRGEGLKRKQASGKGANKQSS
                     GKGSKKKAKTGNGGP"
     misc_feature    88..357
                     /gene="LOC139842780"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; Region: PB1; cl02720"
                     /db_xref="CDD:413452"
     misc_feature    order(259..261,304..306)
                     /gene="LOC139842780"
                     /note="PB1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99731"
     misc_feature    order(259..261,304..306)
                     /gene="LOC139842780"
                     /note="PB1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:99731"
     misc_feature    order(259..261,304..306)
                     /gene="LOC139842780"
                     /note="PB1 interaction surface [polypeptide binding];
                     other site"
                     /db_xref="CDD:99731"
     misc_feature    order(259..261,304..306)
                     /gene="LOC139842780"
                     /note="PB1 interaction surface [polypeptide binding];
                     other site"
                     /db_xref="CDD:99731"
     misc_feature    1135..>1257
                     /gene="LOC139842780"
                     /note="MuDR family transposase; Region: DBD_Tnp_Mut;
                     pfam03108"
                     /db_xref="CDD:427142"
     misc_feature    1876..2166
                     /gene="LOC139842780"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    2644..>2709
                     /gene="LOC139842780"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atggattaca caattcgacc tatagatcct gattatgatc ttggatttat ttacgggtgt
       61 gatgatttac tgtttacact aaagattcat catggtggag agtttactga tgctccagga
      121 agggaatatg tgaatgggaa agtaagttac attgatttta ttgacatgga tatgttttca
      181 atacatgagc ttgaccatct cattcaggac ttgggatatg atggtttcaa ggtgatagta
      241 tatcactttc ttaggcctgg tagtgacctt gattttggtt tagaaccatt aggttcagat
      301 gatgatgtta gaaatatgct taaatatgtc aaagaaagta ggaagaagaa tagggttgtg
      361 gaaatgtctg tttacacaga acatgaactc aacccaaagg tgattgtgcc tgagtttgtt
      421 agtccagctg gtagaagtaa atttgtgcta aaggagatag ttgaggaaga ggaaataaca
      481 gttaagaaaa aaccaaaagg taaaaaaggc aaagttgcta agaagctagt tgtagaagga
      541 gctgaagtaa cagttagtga agttccattg gtccctgcat gtgaagttcc agtagtaatg
      601 gatgaagcta ataatgttga agatgatgaa ccattggtgc tatctagtga agttccagta
      661 gttagtgaag ttccattgga ccctgcatgt gaagtttcag taattaggga tgaagctaat
      721 aatgttgaag atgatgaacc agtggtcctt tctagtgaag ctccagtagt tagtgaagaa
      781 ggtgttgaag atgatcagcc tgaggcatta attgaaagtg ataatgatga tgatgaagat
      841 gatgctgagt ttattgtaga tgaagagaat gatatatttg atgagtttgt tgacatgaga
      901 gaatttgtaa acaatattga tattgatgtt gaatacatgg gaaattcaac caaacaacct
      961 actgaagcac aaaaggatga ctatgttgat aatgaagttt ttggtattga tcaatttgat
     1021 agtgatattg gtgatgagga tgaccctggt tttatgagga aaaaaaaaat taaacaattg
     1081 aaggcacaag agcaggaaag accaattgga gttggtacta ttaggttcat tcatggtcaa
     1141 gagtttggaa ctaaggcaga ggttacagaa gcaataaatt tgcatgcagt tgagagtaga
     1201 aggaatctgg taatagtgaa aaatgacaag attagagtga gggcaaggtg tgagggtgtt
     1261 gtttggaaag agtctggtca aacttcaaaa gatgtgaagg taggtgagac tagtgggacc
     1321 aaattaaagg tgggaaataa agggaaaaag acaaatacac ccactacacc caataaagat
     1381 aagaataaaa aatcacatca tagggcaaag cacattgaat gtgactgggt tttacatgtg
     1441 tccaaggaac ctaatgcaga tacatgggtg gttaaaacat acagagatcg gcatgattgt
     1501 tttgaatcaa gaatcattag gcaatgtaca tcaaaattac tttctaaaca gttggttgat
     1561 catttacaaa caaacccaga aatcccagtg aaagcagtga aagcccaatt agagaaggat
     1621 ttggaggtca aaatacatcc acataaagct tttagggcac ttcaaaaagc cagacaattg
     1681 ataaagggaa gctacatgga tcaatatgga gaactaagag attatatact tgaactgaga
     1741 aggtctaacc ctggtagcac tgttaagctt gaggtagaag attgtgatac accatcatca
     1801 atgacaagag tgttcaaaag gatttacata tgtttgggtc cattgaaaag aggttttaat
     1861 gctattggaa gagatcttct tggtttggat ggagctttta tgaaagaacc agctagtggt
     1921 tttatgttaa cagctgttgg tcttgactcc aataatggaa tataccctct tgcttatgca
     1981 attgtggaat cagaatgcta cagttcatgg ttgtggtttc ttgaattatt ggctagagac
     2041 ttggatttga ctgagatgtc caatttcact ttcataagtg ataggcagaa gggactaata
     2101 gctgctgttg gtaaagtttt tcctgtggct gaacatagat tctgtttgag gcacattcaa
     2161 cagaatatga agaagtattg gagtggggtt gcatataaga atcatttgtg ggcttgtgca
     2221 agtgccacca ctgtacctca gtttgaaagg agaatggctg agtttaaaga ttttagtgaa
     2281 cctgcacatc tgtatctttc taaaatacaa cctgcacaat gggcaagaag tcattttaca
     2341 gggcgtgcac attcagacat attgttaaac aatcattgtg aagtgctaaa tagatggcta
     2401 tgtgaggcta gagacaagcc aatcattact gctttggagt atatcagaac atatttgatg
     2461 aaaagaattg ctaatgttag aacaacaatc tcaaagtcta aagggccact tacaccagct
     2521 gccactaaga tgtttgacaa cataaagaaa gaagcaatga aatgtgatgt tatttggaat
     2581 ggggatgata agtatcaggt gaatggtcat catcatgacc aatgtgtggt tgacatgact
     2641 ttgagaactt gcagctgtag aaaatgggag cttacaggca tgccttgtaa gcatgcagta
     2701 gctgcaatgt tgaacatgtc tgtttatagt caagatgttg ttttagagtc aaatgttcat
     2761 cctgtttatt ggttatctac ttgggaacaa acttattcac ataccattaa ccctgtgaaa
     2821 ggcaaatctg agtgggtcaa gtctccagta ccaacaactt tggtatgtcc aaaaaaaatt
     2881 ccaactgcag gtcgtcctaa gaagaacagg aggaaatcac ttgaagaaaa agatgacatg
     2941 gttaataaag gaaagctgtc aaagaagggt acaagtatta aatgttcaag gtgtggaata
     3001 tatggtcata atgtaagggg ttgcccaact agaggtgaag ggttgaaaag aaagcaagca
     3061 agtggtaaag gtgccaacaa gcaatcaagt ggtaaaggta gcaagaagaa agcaaaaact
     3121 ggaaatggtg gtccttga
//
LOCUS       XM_071832887             669 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842781), mRNA.
ACCESSION   XM_071832887
VERSION     XM_071832887.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..669
                     /gene="LOC139842781"
                     /note="uncharacterized LOC139842781; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842781"
     CDS             1..669
                     /gene="LOC139842781"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688988.1"
                     /db_xref="GeneID:139842781"
                     /translation="MLWNRLKQFTSEHDGHFMVFGDMNVSRDESERFGPAFKRDEDIT
                     FNEFIMDAGLDDVCLGGRRFTWMNKAATKMSRIDRMMISANVSNDFEGLSLVALNRGC
                     SDHTPLFFHNAKTNYGPLPFKFFNSWLKTQAFDAMIRDTVIECSNEVNDSFHAKLKFI
                     KSKIKNWRILMLELKIDDQAVCHDEPVNRRNRWQELDKLQELEDLDSMQKARIKWDVE
                     GDEN"
     misc_feature    <4..333
                     /gene="LOC139842781"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 atgttatgga atcggttgaa acagtttaca tcggagcatg atggtcactt catggttttt
       61 ggtgatatga atgtatcgag agatgagtca gaacgttttg gaccggcatt taaaagagat
      121 gaagatatta cttttaatga atttattatg gatgcaggtt tggatgatgt ttgtttaggt
      181 gggaggagat ttacttggat gaataaagcg gccaccaaaa tgagtcggat tgatagaatg
      241 atgatttcgg ctaacgtgtc taatgacttt gaaggtctaa gtttagtcgc tctgaatcgg
      301 ggatgctcag accatacgcc tttatttttc cataatgcaa agacaaatta cgggcctcta
      361 ccatttaaat tttttaattc gtggttaaag actcaagctt ttgatgctat gatacgtgac
      421 actgtgattg aatgttctaa tgaagtcaat gactcctttc atgcgaagtt gaagtttatt
      481 aagtctaaaa ttaaaaattg gagaatatta atgctagagt tgaaaattga tgatcaagca
      541 gtgtgtcatg atgaacctgt gaatcgtaga aaccggtggc aagaacttga taaattgcaa
      601 gaattggaag atttagattc tatgcaaaaa gcgaggatca agtgggatgt tgaaggtgat
      661 gagaactag
//
LOCUS       XM_071832889            1198 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides transcription termination
            factor MTERF6, chloroplastic/mitochondrial (LOC139842783), mRNA.
ACCESSION   XM_071832889
VERSION     XM_071832889.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1198
                     /gene="LOC139842783"
                     /note="transcription termination factor MTERF6,
                     chloroplastic/mitochondrial; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842783"
     CDS             119..1114
                     /gene="LOC139842783"
                     /codon_start=1
                     /product="transcription termination factor MTERF6,
                     chloroplastic/mitochondrial"
                     /protein_id="XP_071688990.1"
                     /db_xref="GeneID:139842783"
                     /translation="MDISNSHNNSILWFFKHKGFDDQNIHEIFKKCKRLEGVQKENLN
                     ENWDYLKKIGIHERKLPSIVTKCPRIMTLNLNEKLVPMVQCLQTLATKPNEVASAITK
                     FPHILTHSVEEKLCPLLGFFESLGVSGTQLGKMLLYNPRIISYSIDTKLSGVVDFLAS
                     IGLTKEGLIGKILVKNPSIMGYNVEKRLRPTTEFLLSIGITKPDLQKIAINFPEVLCR
                     DVDKILKPNLDYLKTRGFDSRQVATLVARYPPILIKSVKNSLEPRIRFLVEVMDRRIE
                     EAADYPEFFQHGLKKRLERREKLLKQRNISCSLSEMLDCNHKKFLTRFDLVERFV"
     misc_feature    260..1081
                     /gene="LOC139842783"
                     /note="Region: mTERF; pfam02536"
                     /db_xref="CDD:460581"
ORIGIN      
        1 gacacacagc tccgtaaacc aacaagaaaa aaactggggg aacagaaggg gataaggagt
       61 ctcacaaaca cacactgtca ccgttcaatt ttccggctgt ttactcatct ccggacatat
      121 ggacatcagt aacagccaca acaacagcat tttgtggttt ttcaagcaca aaggtttcga
      181 cgaccaaaat attcacgaaa ttttcaaaaa atgcaagcgc ctcgaaggtg tccaaaaaga
      241 aaacttaaac gaaaactggg attacttgaa aaaaatcggc atccatgaga gaaagcttcc
      301 gtccatcgtc acaaaatgcc ctcgaattat gacccttaat ttgaacgaga aactcgttcc
      361 catggtacaa tgtttacaaa ccctagcgac aaaaccaaat gaagtagctt ccgccataac
      421 caaatttccg cacatattaa cccacagcgt tgaagaaaag ctttgcccac ttctcggttt
      481 cttcgagtca ctcggtgtgt caggaactca actcggtaaa atgcttcttt ataacccacg
      541 aataatcagt tacagcattg acacgaagct ttcgggggta gttgactttc ttgctagcat
      601 tgggttgacc aaagaagggt taataggtaa aatcctcgtt aaaaacccgt caattatggg
      661 ttacaatgtt gagaaaagat tgcggcccac aaccgaattc ttgctttcta taggtataac
      721 gaaacccgat cttcaaaaaa tagctattaa tttcccggaa gttttatgca gagatgttga
      781 caagattctg aaaccgaatc ttgattacct taaaacccgc gggtttgatt cccgacaggt
      841 agcaacttta gtggctcgtt atccgcctat tttgattaaa agtgttaaga actcattgga
      901 accgaggatt aggtttttgg tagaggtaat ggatcggaga attgaagagg ctgcggatta
      961 tcctgagttt tttcagcacg gtttaaagaa gcggcttgaa aggcgggaaa agcttttgaa
     1021 gcagaggaac atttcttgca gtttgagtga aatgttggat tgtaatcata aaaagtttct
     1081 tactaggttc gatttggttg agagatttgt ttgatttggc tttagagatc ttattacttg
     1141 tatttgatgt aatattagct tgattcagtt caattgaata agttatttgg tttcctgt
//
LOCUS       XM_071832890             714 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842784), mRNA.
ACCESSION   XM_071832890
VERSION     XM_071832890.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..714
                     /gene="LOC139842784"
                     /note="uncharacterized LOC139842784; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842784"
     CDS             1..714
                     /gene="LOC139842784"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688991.1"
                     /db_xref="GeneID:139842784"
                     /translation="MAQPNFQSPLYLHPSDGPSSLAIQEKLSGAQNYRSWRKSMEIAL
                     SSKRKIGFVTGTVVRSGANTNEAELWDTCNNMVISWIMSSVVDQIAKSIMFVGTAAEI
                     WTQLEKRFALSSGSRKYKLHKETYSIEQQDVVALLSAINLQKEEQHLFQFLNGLDDHF
                     SALRSQLLLISPLPSVETACSMLQQEESQREMFNASETTTLYSKLTQKDKEKCSIFGF
                     RWHPPERCWEKVGYPPWNS"
     misc_feature    37..174
                     /gene="LOC139842784"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    235..570
                     /gene="LOC139842784"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggctcaac ctaactttca aagtccactg tatcttcatc cttctgatgg accttcatca
       61 ttggcgatac aagagaagtt atctggtgct caaaattaca gatcctggag aaaatccatg
      121 gagattgcgt tgtctagtaa acgtaaaatt ggctttgtta ctggcactgt tgttcgatct
      181 ggagctaata ctaatgaagc tgaactgtgg gacacgtgta acaatatggt gattagctgg
      241 atcatgagtt ctgttgttga tcaaattgcc aaatccatta tgtttgttgg tactgctgct
      301 gagatttgga ctcaattaga gaaaaggttt gctctaagca gtggttcaag aaagtataag
      361 ttgcataagg aaacctattc tattgaacaa caagatgttg ttgctctgtt gtctgctata
      421 aatttgcaga aagaagaaca acatttgttt caatttctga atgggctaga tgatcatttt
      481 agtgctttga gaagtcagct acttcttatt tctcctttgc ctagtgttga aactgcttgc
      541 tccatgctac agcaagaaga gtcacaaaga gagatgttta acgcaagtga aaccactact
      601 ttgtacagca aattgactca gaaagataaa gaaaaatgct caatttttgg tttcaggtgg
      661 catccaccag aaaggtgttg ggaaaaggtt ggatatccac cttggaatag ctag
//
LOCUS       XM_071832891            2136 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842785), mRNA.
ACCESSION   XM_071832891
VERSION     XM_071832891.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2136
                     /gene="LOC139842785"
                     /note="uncharacterized LOC139842785; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842785"
     CDS             1..2136
                     /gene="LOC139842785"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688992.1"
                     /db_xref="GeneID:139842785"
                     /translation="MWPVILTTYNLPPWLCMKESTFMLTLLIPGPKSPGKDIDIFLRP
                     LIDELKVLWSDGVTTKDHATNSYFNMRAIILFTINDFPARSSLSGWSGQGYMACPTCN
                     VDTPSKRALTKIIYIGHRMYLSIKNKLRFSKSFDGKNETRRPPRRRTNDEILKQLENA
                     PDPDPGKYGGKKRKRDSTVEGNWSKKSIFYELEYWSSVELKHNLDVMHIEKNVCESLL
                     NTLLMNKEKSKDTLTARKVLEEWGIRKELWLKPLGNGKSVKPHPKYSFSSADRNEFCK
                     FIRQVKLPDGFGSNFKNKVIENDTKIAGLKSHDHHIMMQHLLPVGVRAYLDTSISTPI
                     IELCLFFKQLCARTLMTSDMEDAKVKLINILCSLEQIFPPSFFDIMIHLVMHLPEEAI
                     QGGPVYIRWMYPFERYMKKLKNYVRNKARPEGSIAEGYVADEALTYASRYLHSIKRLR
                     VADESQCGNELFDLANGPLYINSYTACIVNGVRFVVHSRDLCRITQISGISTTGPDGS
                     LFYGVLEEILELCYLWGHKVVLFRCKWFKTDKNGCIIKNNLTNISTQHEWYKEDPYLL
                     ATQTNLVFYLGDPSKRKGGSSKYWKVVQEVHHRNTWDRDILGADNELDLIHGITSSDI
                     RLSANLESLPQTKLSRDETTVDDDDDMLGTEYDNADEDNEETDEDATEVAVEDMIRVE
                     EVDEDADETDWATDDNEDSDHDSVHYISD"
     misc_feature    <1..471
                     /gene="LOC139842785"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1030..1341
                     /gene="LOC139842785"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    1555..1779
                     /gene="LOC139842785"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgtggccgg tcatattgac aacatacaat ttgccaccct ggttatgtat gaaagagtca
       61 accttcatgc tgacattgtt aatacctggc cctaaatctc ccgggaagga cattgatatt
      121 tttctaaggc cattgattga tgaattgaag gttctatggt ctgacggagt tacaaccaaa
      181 gaccatgcca caaatagtta cttcaatatg cgtgccatta ttttatttac cataaatgat
      241 ttccctgctc gtagtagttt atccggttgg agtggtcaag gatacatggc atgccctacg
      301 tgtaatgtcg acactccatc taaacgtgct ttgactaaaa tcatttatat tggtcataga
      361 atgtacctat ccatcaaaaa taaattgagg ttttccaagt cattcgatgg aaaaaacgag
      421 actaggcgtc ctcctcgaag aagaacaaat gatgagatct taaaacaact tgaaaatgcg
      481 ccagatcctg atccgggaaa atacgggggt aagaagagaa aacgtgattc aacggttgag
      541 ggtaactgga gtaaaaaatc gattttctac gagcttgagt attggtcttc tgttgaatta
      601 aaacataatc tagatgttat gcatatcgaa aaaaatgtgt gtgagagttt gttgaatact
      661 ttgctaatga acaaggaaaa atcaaaagac acgttgacag caaggaaggt gttagaagag
      721 tggggtattc gcaaagaatt gtggctaaaa ccactcggta atggtaagtc agtaaaacct
      781 catcctaagt actctttctc atctgccgac cggaatgaat tttgtaaatt cattagacaa
      841 gttaaattac ctgatgggtt tggctcaaac tttaaaaata aagttattga aaatgatacc
      901 aagatagcag gactcaagtc tcatgaccat catataatga tgcaacattt gcttcctgtt
      961 ggcgttcgag cgtacttaga cacatctatt tcaacaccaa taattgagct ttgcttgttc
     1021 tttaagcaac tttgtgctcg aaccttgatg acgtctgaca tggaagatgc caaagttaag
     1081 ttgattaaca ttttgtgctc gctcgagcaa atcttccctc cgtcattttt tgacataatg
     1141 attcatttgg ttatgcattt gcctgaagag gctattcaag gtggtcctgt ttacataagg
     1201 tggatgtatc catttgaaag atacatgaaa aagttgaaaa attatgtaag aaataaagct
     1261 aggcccgaag gttccattgc tgaggggtat gttgcagacg aggccttaac ttatgcctca
     1321 aggtatcttc atagcatcaa gcgtctccga gtagctgatg aatctcaatg tggtaatgag
     1381 ttatttgatt tggcaaatgg accattatat ataaactctt acaccgcttg cattgttaac
     1441 ggtgtgaggt ttgtggttca tagtcgagac ttatgccgaa taacacagat tagcggaata
     1501 tcaactaccg gtcctgatgg atctttgttt tatggtgtgt tggaggaaat tttggagctt
     1561 tgttatctgt ggggtcataa agttgtttta tttcgatgta aatggttcaa aaccgataaa
     1621 aatggttgta tcatcaaaaa taacttaacc aatatttcta ctcaacatga atggtataaa
     1681 gaagatccat acctccttgc tacacaaaca aatctagtct tttatctggg tgatcctagt
     1741 aaaagaaagg gtggttcgag taaatattgg aaggtggttc aagaagtcca ccatcggaac
     1801 acctgggatc gagatatcct cggagccgat aacgaattag atcttataca tggcatcact
     1861 tcatccgata ttcgattgtc tgctaacttg gagtctttgc ctcaaacgaa gttgagtaga
     1921 gatgaaacaa cggtagatga tgatgatgat atgcttggca cagaatatga caatgctgat
     1981 gaagacaatg aggagacaga tgaagatgca accgaagtcg cggtcgaaga catgattaga
     2041 gttgaagaag tagacgagga tgcggacgaa actgactggg ccacagacga caacgaagat
     2101 agtgatcatg attctgtgca ttatattagt gactga
//
LOCUS       XR_011757451             221 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139842786), ncRNA.
ACCESSION   XR_011757451
VERSION     XR_011757451.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..221
                     /gene="LOC139842786"
                     /note="uncharacterized LOC139842786; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842786"
     ncRNA           1..221
                     /ncRNA_class="lncRNA"
                     /gene="LOC139842786"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:139842786"
ORIGIN      
        1 ggtggtacaa acaaggagaa gacccggtga tattagacta ccgagtttag ctggtgatcg
       61 gtttaggtac tgctaggatt gggatttggg ctgaagacgt gtttgactcg aagtactctg
      121 atgtgtctta ttttaaaatg aaactgtatt ttatataatc cggtttgtaa taaataactt
      181 aattacgtgt tttataaata acgtggtgtt tgttaaatta a
//
LOCUS       XM_071832892            2136 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842788), mRNA.
ACCESSION   XM_071832892
VERSION     XM_071832892.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2136
                     /gene="LOC139842788"
                     /note="uncharacterized LOC139842788; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842788"
     CDS             1..2136
                     /gene="LOC139842788"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688993.1"
                     /db_xref="GeneID:139842788"
                     /translation="MWPVILTTYNLPPWLCMKESTFMLTLLIPGPKSPGKDIDIFLRP
                     LIDELKVLWSDGVTTKDHATNSYFNMRAIILFTINDFPARSSLSGWSGQGYMACPTCN
                     VDTPSKRALTKIIYIGHRMYLSIKNKLRFSKSFDGKNETRRPPRRRTNDEILKQLENA
                     PDPDPGKYGGKKRKRDSTVEGNWSKKSIFYELEYWSSVELKHNLDVMHIEKNVCESLL
                     NTLLMNKEKSKDTLTARKVLEEWGIRKELWLKPLGNGKSVKPHPKYSFSSADRNEFCK
                     FIRQVKLPDGFGSNFKNKVIENDTKIAGLKSHDHHIMMQHLLPVGVRAYLDTSISTPI
                     IELCLFFKQLCARTLMTSDMEDAKVKLINILCSLEQIFPPSFFDIMIHLVMHLPEEAI
                     QGGPVYIRWMYPFERYMKKLKNYVRNKARPEGSIAEGYVADEALTYASRYLHSIKRLR
                     VADESQCGNELFDLANGPLYINSYTACIVNGVRFVVHSRDLCRITQISGISTTGPDGS
                     LFYGVLEEILELCYLWGHKVVLFRCKWFKTDKNGCIIKNNLTNISTQHEWYKEDPYLL
                     ATQTNLVFYLGDPSKRKGGSSKYWKVVQEVHHRNTWDRDILGADNELDLIHGITSSDI
                     RLSANLESLPQTKLSRDETTVDDDDDMLGTEYDNADEDNEETDEDATEVAVEDMIRVE
                     EVDEDADETDWATDDNEDSDHDSVHYISD"
     misc_feature    <1..471
                     /gene="LOC139842788"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
     misc_feature    1030..1341
                     /gene="LOC139842788"
                     /note="Domain of unknown function (DUF4218); Region:
                     DUF4218; pfam13960"
                     /db_xref="CDD:433607"
     misc_feature    1555..1779
                     /gene="LOC139842788"
                     /note="Domain of unknown function (DUF4216); Region:
                     DUF4216; pfam13952"
                     /db_xref="CDD:464054"
ORIGIN      
        1 atgtggccgg tcatattgac aacatacaat ttgccaccct ggttatgtat gaaagagtca
       61 accttcatgc tgacattgtt aatacctggc cctaaatctc ccgggaagga cattgatatt
      121 tttctaaggc cattgattga tgaattgaag gttctatggt ctgacggagt tacaaccaaa
      181 gaccatgcca caaatagtta cttcaatatg cgtgccatta ttttatttac cataaatgat
      241 ttccctgctc gtagtagttt atccggttgg agtggtcaag gatacatggc atgccctacg
      301 tgtaatgtcg acactccatc taaacgtgct ttgactaaaa tcatttatat tggtcataga
      361 atgtacctat ccatcaaaaa taaattgagg ttttccaagt cattcgatgg aaaaaacgag
      421 actaggcgtc ctcctcgaag aagaacaaat gatgagatct taaaacaact tgaaaatgcg
      481 ccagatcctg atccgggaaa atacgggggt aagaagagaa aacgtgattc aacggttgag
      541 ggtaactgga gtaaaaaatc gattttctac gagcttgagt attggtcttc tgttgaatta
      601 aaacataatc tagatgttat gcatatcgaa aaaaatgtgt gtgagagttt gttgaatact
      661 ttgctaatga acaaggaaaa atcaaaagac acgttgacag caaggaaggt gttagaagag
      721 tggggtattc gcaaagaatt gtggctaaaa ccactcggta atggtaagtc agtaaaacct
      781 catcctaagt actctttctc atctgccgac cggaatgaat tttgtaaatt cattagacaa
      841 gttaaattac ctgatgggtt tggctcaaac tttaaaaata aagttattga aaatgatacc
      901 aagatagcag gactcaagtc tcatgaccat catataatga tgcaacattt gcttcctgtt
      961 ggcgttcgag cgtacttaga cacatctatt tcaacaccaa taattgagct ttgcttgttc
     1021 tttaagcaac tttgtgctcg aaccttgatg acgtctgaca tggaagatgc caaagttaag
     1081 ttgattaaca ttttgtgctc gctcgagcaa atcttccctc cgtcattttt tgacataatg
     1141 attcatttgg ttatgcattt gcctgaagag gctattcaag gtggtcctgt ttacataagg
     1201 tggatgtatc catttgaaag atacatgaaa aagttgaaaa attatgtaag aaataaagct
     1261 aggcccgaag gttccattgc tgaggggtat gttgcagacg aggccttaac ttatgcctca
     1321 aggtatcttc atagcatcaa gcgtctccga gtagctgatg aatctcaatg tggtaatgag
     1381 ttatttgatt tggcaaatgg accattatat ataaactctt acaccgcttg cattgttaac
     1441 ggtgtgaggt ttgtggttca tagtcgagac ttatgccgaa taacacagat tagcggaata
     1501 tcaactaccg gtcctgatgg atctttgttt tatggtgtgt tggaggaaat tttggagctt
     1561 tgttatctgt ggggtcataa agttgtttta tttcgatgta aatggttcaa aaccgataaa
     1621 aatggttgta tcatcaaaaa taacttaacc aatatttcta ctcaacatga atggtataaa
     1681 gaagatccat acctccttgc tacacaaaca aatctagtct tttatctggg tgatcctagt
     1741 aaaagaaagg gtggttcgag taaatattgg aaggtggttc aagaagtcca ccatcggaac
     1801 acctgggatc gagatatcct cggagccgat aacgaattag atcttataca tggcatcact
     1861 tcatccgata ttcgattgtc tgctaacttg gagtctttgc ctcaaacgaa gttgagtaga
     1921 gatgaaacaa cggtagatga tgatgatgat atgcttggca cagaatatga caatgctgat
     1981 gaagacaatg aggagacaga tgaagatgca accgaagtcg cggtcgaaga catgattaga
     2041 gttgaagaag tagacgagga tgcggacgaa actgactggg ccacagacga caacgaagat
     2101 agtgatcatg attctgtgca ttatattagt gactga
//
LOCUS       XM_071832893            1833 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842789), mRNA.
ACCESSION   XM_071832893
VERSION     XM_071832893.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 71% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1833
                     /gene="LOC139842789"
                     /note="uncharacterized LOC139842789; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842789"
     CDS             1..1833
                     /gene="LOC139842789"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688994.1"
                     /db_xref="GeneID:139842789"
                     /translation="MMIYGSGSISSTPISFEAKMESCAAMHKRCKSEGRTYEHNKTMF
                     TASQPVKMILQLQKELMDQFVIRKELEKATADQPPVNDLIDESSLPKRAKDLIKEISI
                     LEFEVKHLEEHLLSLYRNAFQEFFNPIAKGPTKESYVQRSQSSLSSRINLRGNIVREA
                     LDSYHTLPLTLLECFSKEKQLNKFAHKKKGCNPLWREKPLIRPIDDLSSTSLAEHREI
                     CASANQLSEEMVKCICSIYCQIADPPLVDRCPLSSPSDFSPRDEFGVWSPQREVEKTW
                     LHKHNDSEPSMEFSDSCSSVVEVQGICKNDQRSSKVERKQRNYRQGRNVRSLVSQLEQ
                     VDPRMLKYEEKLAFWINVHNALVMHAYLVYGTASSTLKRISAVLKASYNIGGHNISVG
                     DIQRTILGCRLPRPGQWLQSLLFPMPRGKSRDARKDYAIVDAQPLLYFALCSGSHSDP
                     MLRIYTPKSIFHDLEVAREEYIHTNVRIHQGHKLFVPKLLELYMKDSSLCVNGLMDII
                     EHSMPEFYLKSFKVIRTGGDHVKINRKQRYNGGGCLVMKMVEGGFVVEMAGEILETDI
                     DDSDMQQKVNLGNNKLKQLDQLSTVKDLLICLLCGQEGGSDRDV"
     misc_feature    157..366
                     /gene="LOC139842789"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     Region: Lzipper-MIP1; pfam14389"
                     /db_xref="CDD:464163"
     misc_feature    1027..1416
                     /gene="LOC139842789"
                     /note="Protein of unknown function, DUF547; Region:
                     DUF547; pfam04784"
                     /db_xref="CDD:461427"
ORIGIN      
        1 atgatgattt atggaagtgg gtccatctcc agtacaccta tttcttttga agcaaaaatg
       61 gaatcatgtg ctgcaatgca caagcgctgt aagagtgagg gaagaacata tgaacataac
      121 aagacaatgt tcacagcttc tcagcctgtg aagatgattc tacaacttca aaaggaactc
      181 atggatcagt tcgtaatacg aaaagaattg gagaaagcaa cggctgatca gcccccggta
      241 aacgatctta tagatgaaag ctcacttccg aagcgtgcaa aagatcttat taaggagata
      301 tcaatactag aatttgaagt taagcatttg gaagagcatc tactctcact gtatcgtaac
      361 gctttccaag aattttttaa tccaatcgca aaaggaccga ctaaagagtc ttatgttcaa
      421 cgtagtcagt cttcgctttc atcaagaata aatcttcgtg gaaatatcgt tcgtgaagct
      481 ctagattcat atcatacatt gccattaaca ttgcttgagt gtttttcgaa ggaaaaacag
      541 ttaaataaat ttgctcacaa aaagaaaggg tgcaaccctt tgtggcggga aaaaccgtta
      601 atccgtccta ttgatgattt atcgagtact agtctagctg agcatcgtga aatttgcgcg
      661 tctgcaaatc agctatctga agagatggtt aagtgcattt gttccatata ctgtcaaatt
      721 gccgatccgc ccttggtcga tcgttgtccc ctttcatcac ctagtgattt ttcaccaaga
      781 gatgagtttg gtgtgtggag cccacaacgc gaggttgaaa aaacgtggtt gcataagcat
      841 aatgattcgg aaccatcaat ggagtttagt gactcttgct caagtgtggt tgaggtgcaa
      901 ggtatttgca aaaatgatca aagatcgagt aaagttgaac gtaaacaacg aaactatagg
      961 caaggacgga acgtaaggtc tctagtttct cagttggaac aagttgatcc aagaatgttg
     1021 aagtatgagg aaaagctagc attttggatc aatgttcata acgcacttgt gatgcatgca
     1081 tacttagttt atggaactgc aagcagcact ttaaagagga tatctgcagt cttaaaggct
     1141 tcgtataaca ttggtggtca caatattagc gttggtgaca tccaaagaac gatattggga
     1201 tgcaggctgc ctcgtccggg acaatggctt caatctttat tatttccgat gcctaggggc
     1261 aagtcaagag atgcacgaaa agattatgca attgttgatg cgcagcctct tttatacttt
     1321 gcactttgtt ctggaagtca ttctgatccc atgttacgaa tctacacgcc aaaaagcatt
     1381 ttccatgatc ttgaagtggc tagagaagag tatattcata caaacgtaag aatacaccaa
     1441 ggacataagc tgtttgtgcc gaaacttttg gaattgtaca tgaaagattc aagtttgtgt
     1501 gttaatgggt tgatggatat aattgaacac tctatgcctg aattttatct taagagcttc
     1561 aaggtgattc gaacaggtgg tgaccatgtg aaaataaaca gaaagcagag gtataatggt
     1621 ggtggttgtt tagtgatgaa gatggtagaa ggtggtttcg tggtggagat ggccggtgag
     1681 atattagaga cagatataga tgatagtgat atgcaacaga aagtgaatct tggaaacaat
     1741 aaactcaaac aattagatca attaagcaca gtgaaggatt tgttgatttg tttgttgtgt
     1801 ggacaagagg gaggaagtga tagggatgtg taa
//
LOCUS       XM_071832894             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842790), mRNA.
ACCESSION   XM_071832894
VERSION     XM_071832894.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139842790"
                     /note="uncharacterized LOC139842790; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842790"
     CDS             1..501
                     /gene="LOC139842790"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688995.1"
                     /db_xref="GeneID:139842790"
                     /translation="MVAELSESFLYAQSACGLWKELQERYGQSNGPLIYQIERELSKV
                     NQGIQTVAAYSNKLKRGKLIQFLMKLDDEYEYVRGQILSMDPLPTLNKAYDIVQQVEK
                     QKQVTLHEHDRTAFYANNKGGGSSGNIKKSTKDEKKCTFCSQEGHVFEECFERIRYPD
                     WNKGRK"
ORIGIN      
        1 atggttgcag aactttctga atcgtttctt tatgcacaat cagcttgtgg attgtggaag
       61 gaattgcaag aaaggtatgg acaaagcaat ggtccattga tatatcagat tgaaagagag
      121 cttagcaagg tcaatcaagg aattcaaact gtagctgctt actctaataa gctgaaaaga
      181 gggaagctga ttcaattttt gatgaagctt gatgatgaat atgagtatgt tagagggcag
      241 atcttgtcca tggatccatt accaacattg aacaaggctt atgacattgt tcagcaggtg
      301 gaaaagcaaa aacaagtcac actacatgag catgatcgta ctgcctttta tgctaataac
      361 aaaggtggtg gtagttctgg caatatcaag aagtctacaa aagatgagaa gaaatgcaca
      421 ttttgcagtc aggagggaca tgtgtttgaa gagtgttttg aaaggataag gtatccagat
      481 tggaataagg gcagaaaata a
//
LOCUS       XM_071832896             636 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842791), mRNA.
ACCESSION   XM_071832896
VERSION     XM_071832896.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..636
                     /gene="LOC139842791"
                     /note="uncharacterized LOC139842791; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842791"
     CDS             1..636
                     /gene="LOC139842791"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071688997.1"
                     /db_xref="GeneID:139842791"
                     /translation="MIPIVSPWPFCKWAIDIVGPFPKGAGNAEYLVVAIDFFTKWVEA
                     KPLRTITSKQVRDFFWESILCRFGVPNEIVSDNGTQFEEAVIPAKITVPTERIFSYSE
                     GENDERLRTNLNYTEERREMAAIQEAANKQRIAKYYDKHVRARTYKVGDLVWCDNQAS
                     RAQNTGKLGPNWKGPYRVVGVSNTRTYKLAELKGNPIKRTWHATALKKCYM"
     misc_feature    25..>243
                     /gene="LOC139842791"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgataccta tcgtatcgcc atggccattc tgcaaatggg ctatcgacat agtgggacct
       61 ttcccaaagg gcgcgggaaa cgctgagtac ctggtggtag ctatagactt cttcaccaaa
      121 tgggtggaag ccaagccatt gcgcactatt accagtaagc aagttagaga ttttttctgg
      181 gaaagcatat tgtgcagatt cggcgtacct aatgagattg ttagcgataa tggtacgcaa
      241 tttgaagagg cagtaatacc agcgaagata acagttccga cagaaagaat tttttcatac
      301 agcgaaggcg agaacgacga aagattgcgc actaacctaa actacacgga ggaacgcagg
      361 gaaatggcag caattcaaga agccgccaac aagcagcgca ttgcaaaata ttatgacaag
      421 cacgtaaggg caagaactta caaggtagga gaccttgtgt ggtgcgacaa ccaagcaagc
      481 agggctcaaa acactggaaa gttagggcca aactggaaag gaccttacag ggtcgtgggg
      541 gtcagtaaca ccagaactta caaactggca gagcttaagg gaaatccaat caagcggacc
      601 tggcatgcta ccgcgcttaa aaaatgctac atgtaa
//
LOCUS       XM_071832897             579 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842792), mRNA.
ACCESSION   XM_071832897
VERSION     XM_071832897.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..579
                     /gene="LOC139842792"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842792"
     CDS             1..579
                     /gene="LOC139842792"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071688998.1"
                     /db_xref="GeneID:139842792"
                     /translation="MSSTDRTRPDYSILDQLSSLDVYRRLVGRLLYLSMTHPDISYAV
                     QRLSQFISNSKDKHMQAAVHLLRYLKGSISKGLFYPVQPNLKIEGFSDADWASCLMTR
                     RSLTGYCIFLGHSFVSCKTKKQVTISRSSTEAEYRSMASATCELIWLTYMLKDLGIHV
                     QVQITLFCDNKAAQQIAANPCFHERTKHLDID"
     misc_feature    262..>576
                     /gene="LOC139842792"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(274..285,388..396,403..405,505..507)
                     /gene="LOC139842792"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtcaagca cggaccgaac ccgacccgat tattctatac ttgatcagtt atcttctcta
       61 gatgtttata gaagattagt aggaagactt ttgtatctgt caatgacaca tccagatata
      121 tcatatgcag tccaacgtct aagtcagttc atttcaaatt ctaaagataa acatatgcag
      181 gctgcagtac acttgttaag atacttaaag ggttccattt ccaaggggtt gttctaccct
      241 gttcaaccta atctaaaaat tgaaggtttt tcagatgctg attgggcttc ttgtttaatg
      301 actagaagat ctctcacagg ctattgtatc tttttaggtc actcatttgt ttcttgtaaa
      361 acaaagaaac aagtgacgat ttccagatct tctacagaag cagagtatag gagcatggct
      421 tctgccacat gtgaattgat ttggttgaca tacatgctca aggatctggg aattcatgtt
      481 caagttcaaa ttactttgtt ttgtgataac aaggctgctc aacagattgc agctaatcca
      541 tgcttccatg aacgtacaaa acacttggat attgactga
//
LOCUS       XM_071832898             330 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative lipid-transfer
            protein DIR1 (LOC139842793), mRNA.
ACCESSION   XM_071832898
VERSION     XM_071832898.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..330
                     /gene="LOC139842793"
                     /note="putative lipid-transfer protein DIR1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:139842793"
     CDS             1..330
                     /gene="LOC139842793"
                     /codon_start=1
                     /product="putative lipid-transfer protein DIR1"
                     /protein_id="XP_071688999.1"
                     /db_xref="GeneID:139842793"
                     /translation="MESYTKLAIVAIVLIAALVTEPLAVNGLPICGVTTDDLQTCQPA
                     VAKDVDPLPQPTADCCTALRNADMSCFCKLKDKYPGVLAYYKIDPKRAMDLPRRCNIT
                     QAPNFHC"
     misc_feature    91..327
                     /gene="LOC139842793"
                     /note="Non-specific lipid-transfer protein (nsLTP)-like
                     subfamily; composed of predominantly uncharacterized
                     proteins with similarity to nsLTPs, including Medicago
                     truncatula MtN5, the root-specific Phaseolus vulgaris
                     PVR3, Antirrhinum majus FIL1, and Lilium...; Region:
                     nsLTP_like; cd04660"
                     /db_xref="CDD:240018"
ORIGIN      
        1 atggagtcgt acacaaagct agccattgta gccattgttc taattgctgc ccttgtgact
       61 gaacccttgg ctgtaaatgg tttgccaata tgtggtgtaa ccactgatga tctacagaca
      121 tgtcagccag cagttgcaaa agatgtggac cctctcccac aaccgactgc agattgttgc
      181 actgccctac gcaatgctga catgtcgtgt ttctgcaaat taaaggacaa gtacccagga
      241 gtgttggctt actataaaat cgacccaaaa cgtgccatgg atctaccaag aagatgcaac
      301 ataacacaag caccaaactt ccattgctag
//
LOCUS       XM_071832899            1617 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides DELLA protein RGL1-like
            (LOC139842794), mRNA.
ACCESSION   XM_071832899
VERSION     XM_071832899.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1617
                     /gene="LOC139842794"
                     /note="DELLA protein RGL1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842794"
     CDS             1..1617
                     /gene="LOC139842794"
                     /codon_start=1
                     /product="DELLA protein RGL1-like"
                     /protein_id="XP_071689000.1"
                     /db_xref="GeneID:139842794"
                     /translation="MEPKFLINHTKFSAFNPFELYDNVHDDHQHFPQPEIDNFTPDLP
                     SLQDVNHNQIQLQEFENHDPINCSSLSKSKSKSTFAPPGSLELISNYQSKFKRLRDDS
                     VDDTKFKSHESLSTVEIIKLAAEKFIKFSTQRVDGYTMFTHPYGSSAFTSLSVDETRD
                     VELVFQLLTAAEKVGRKHFELATKYLLQCGLVASDESSPIERLVYYLSEALHKRISNE
                     TGIHVPTKREKTGLKNETPVAMGSNPTFLACHQALPFNQILQFSGIQAILDQVGTSSK
                     VHLIDIHIRSGVQWTAMIQAVSEQKSQIEILKLTAFATSSDVQNVGETGKRLESFATS
                     LSLPFEFRILLLSDITEVEEQQFDVQEGETVAVYCQKILSTLISRPRSLENLMRVIST
                     INPSIIVVAEVEANHISTSFVNRFTETLFSYGAIFDSLEACMSRNNAHRAIVEGVHLA
                     DCIQNIVATEGDERISRGVNLNTWRSFFVRFGMEEIEFSDSCMYQANLVLKQFSCASS
                     CTLENNGKCLIVGWKGTPLHSLSTWRFIRE"
     misc_feature    487..1602
                     /gene="LOC139842794"
                     /note="GRAS domain family; Region: GRAS; pfam03514"
                     /db_xref="CDD:397536"
ORIGIN      
        1 atggaaccaa agtttcttat caaccacacc aaattctctg cttttaaccc ttttgaatta
       61 tatgacaatg ttcatgatga tcaccaacac tttccacaac ctgaaatcga caattttaca
      121 ccagatttac cttcgttaca agacgtaaac cacaatcaga tccaacttca agaattcgaa
      181 aaccatgatc ccatcaactg cagttcactt tcaaagtcaa agtcaaagtc aacatttgca
      241 cctccagggt cactagagct cataagtaat taccaaagca aattcaaacg tttacgagat
      301 gattctgtcg atgatactaa attcaaaagt catgaaagtc tatccacagt tgaaataatt
      361 aaacttgcag ctgaaaagtt tataaagttt tctacacaac gagttgatgg ttataccatg
      421 tttacacatc cgtacgggtc ctctgctttc acaagcttat cggtagatga aactagggac
      481 gttgagctag ttttccagct tttgactgct gctgagaaag ttggccgaaa acatttcgag
      541 ctcgctacta agtacttgtt gcaatgtggc ttggttgctt ccgatgaaag ttctccaatc
      601 gaacgcttgg tttattattt aagtgaagca ttacataaaa gaattagcaa cgaaaccgga
      661 atacatgttc ctacgaaacg agaaaaaacg ggtttaaaga atgaaactcc tgtggcaatg
      721 ggatcaaatc caacattcct ggcatgtcat caagctcttc ctttcaatca aatattgcaa
      781 ttttccggaa tacaagcaat cctagatcaa gttggtacat caagcaaggt tcatttgata
      841 gatattcata ttcgaagcgg tgtacaatgg acggccatga tacaagcagt atcagaacaa
      901 aaatcccaga tcgaaatatt gaaactaaca gcatttgcca cgtcctcaga tgttcaaaac
      961 gttggtgaaa ccggaaaaag actagagagt tttgctacaa gtttgagttt accatttgag
     1021 tttagaatcc tcttgttatc tgacatcact gaggtcgaag aacaacaatt tgatgttcaa
     1081 gagggtgaaa ccgttgcagt ctattgtcaa aaaatactaa gcacgttgat ttcgaggcct
     1141 cgtagtttag agaatctgat gagagtgatt agtacgatca atccgtcgat tattgtagtg
     1201 gcggaggtgg aagctaacca tatttcaaca tcttttgtaa acaggtttac tgagacatta
     1261 ttctcttatg gtgcaatttt tgatagctta gaagcatgta tgagtcgaaa taacgctcat
     1321 agagccatag tggaaggtgt tcatcttgct gattgtattc aaaacatcgt ggctactgaa
     1381 ggggacgagc gaataagtag gggtgtaaat ttgaatacgt ggagatcgtt ttttgtgagg
     1441 tttggaatgg aggaaattga gtttagtgat tcgtgtatgt atcaagcgaa cctcgtgttg
     1501 aaacagtttt catgtgcaag ttcttgcaca cttgagaata acggcaagtg tttaatcgtc
     1561 gggtggaaag gaaccccatt gcattctctt tcgacgtgga ggttcattcg tgaataa
//
LOCUS       XM_071832900            1236 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842795), mRNA.
ACCESSION   XM_071832900
VERSION     XM_071832900.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1236
                     /gene="LOC139842795"
                     /note="uncharacterized LOC139842795; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     Proteins"
                     /db_xref="GeneID:139842795"
     CDS             1..1236
                     /gene="LOC139842795"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689001.1"
                     /db_xref="GeneID:139842795"
                     /translation="MRGEWNGLQALMLKECPYAYYIHCFAHQLQLALVAASKEVVEVH
                     KFFKNLNFIINVLDSSSKHHDQLQDAQVSEIAHLAEIGELESGKGANQIQRLQRPGDT
                     RWSSHYRSIRSLLKLYVPAIVVLCEIAINESTSSQKGDASFALTELLSFDFVFVMHLM
                     KKIMSRTDKICQAFQRKSQDIVNALSLVSTTKMLIQNLKEESWQSLLDKVKDIVRSRS
                     KKDDVTVEHHYRVDVFIAAIDSQLHELNSRFSESVTKLLQLSVTLDPKKSFEKNDICK
                     LAKKFYPSDFTEQDIIQLKLELRHYELDVPNDLEFKKIQTVAKLCRGLHETKRSDSYP
                     LLDRLIRLVLTLPVSTATSERAFSSMKMVKTRLRSSMSDDFLKNCSLLYIERDIVDKI
                     SIDGIIDDFAFKKPRRVQL"
     misc_feature    <982..1164
                     /gene="LOC139842795"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atgcgtggag aatggaatgg gttacaagct ttaatgttga aggaatgccc ttatgcgtat
       61 tatattcatt gttttgctca tcaattgcaa ctagctttag ttgcggcatc taaagaggtg
      121 gttgaagtgc acaaattttt taagaatctg aacttcatta ttaatgtgct tgattcttct
      181 tctaaacatc acgatcagtt acaagatgct caagtcagcg aaattgcaca tctggccgaa
      241 attggagagc ttgaaagtgg caaaggagca aatcaaatcc aacgtttgca aagacctgga
      301 gatacaagat ggagttcaca ttatcgatcg atacgtagct tattgaaatt gtatgttccc
      361 gccattgtag tgctatgtga aattgctatt aatgagtcta cttcttcaca aaaaggtgat
      421 gcttcttttg ctcttacgga attattgtca tttgattttg tttttgttat gcatttgatg
      481 aagaagataa tgagtagaac cgacaagatt tgtcaagctt ttcaacgtaa atctcaagat
      541 atagttaatg ctttgagttt ggtttccact acaaagatgt tgattcaaaa tctaaaggaa
      601 gaaagttggc agtcactttt ggataaagtt aaagatatag ttcgatctcg ttcaaaaaaa
      661 gatgatgtga ctgttgaaca tcattatcga gttgatgtgt tcattgcggc tattgatagt
      721 caattgcatg agttgaactc aagattcagt gagtctgtga caaaacttct tcaacttagt
      781 gttactttgg accctaaaaa atcgtttgaa aaaaacgata tttgtaaatt agcaaaaaag
      841 ttctatcctt cagactttac agagcaggat attattcagc taaaacttga gttgcgacat
      901 tatgagctag atgtgcctaa tgatcttgaa tttaaaaaaa ttcaaaccgt tgcgaagtta
      961 tgtagaggcc tacacgaaac taagaggtcg gattcatacc ctttgcttga tagattgatt
     1021 cgtcttgtat taactcttcc ggtttcaacc gcaacaagtg aaagagcttt ctcatcaatg
     1081 aaaatggtta aaacgagact tcgtagcagc atgagtgacg attttttaaa aaattgttcg
     1141 cttctttaca ttgaaaggga tattgtagac aaaatttcta ttgatgggat aatagatgat
     1201 ttcgctttca agaaacctag acgtgtccaa ctttaa
//
LOCUS       XM_071832901            1614 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842797), mRNA.
ACCESSION   XM_071832901
VERSION     XM_071832901.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1614
                     /gene="LOC139842797"
                     /note="uncharacterized LOC139842797; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842797"
     CDS             1..1614
                     /gene="LOC139842797"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689002.1"
                     /db_xref="GeneID:139842797"
                     /translation="MRNQSWFNMILGRTALRMFGTIPSVLHGMVKFSANKGIGMLTSA
                     VVMTFYIAKSYCGPMMRCVGPIEAEMIIDEVHNGSCALHSGNEINYAPIKKFVYALIL
                     TSRRLRRYFQGHPVHVLTNMPVKQVLTKPEISGRLALWAVELGAYQISYLPRSAVKGQ
                     VLADYLAEMTGELEVINERTELKPVVGETWDLFTDGASCAEGAGAGLVLASPSGEEHT
                     YGLRFNFDVTNNEAEYEALLAGLNIAQKMDITKLRAFTDSQLVANQFNGSFEAHDSSI
                     QKYLQLLKELAMRFEHFELAQVPRSQNKKADALSKLAALTFSHFQKQVWVEELPSKSI
                     DNDLMVASVVEDQPNWMEPILQHIRSDIFPSDKREAHLVRERAPMYIIQNDILYRKSY
                     CGPMMRCVGPIKAEMIIDEVHNGSCALHSGPGNVKFLIAAIDYLTKWVEAKAVRTITG
                     VQVRNFVWKYIVCRFGIPRELVSDNGECVLRNNDASRAEKLGKLGPNWEGPYQVVTIN
                     AAGSYKLADVEVRTLPNAWHAALLKRYYA"
     misc_feature    <250..498
                     /gene="LOC139842797"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    568..942
                     /gene="LOC139842797"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(583..594,682..690,697..699,769..771,889..891,
                     931..933)
                     /gene="LOC139842797"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
     misc_feature    1261..>1428
                     /gene="LOC139842797"
                     /note="Integrase core domain; Region: rve; pfam00665"
                     /db_xref="CDD:459897"
ORIGIN      
        1 atgcgaaacc agtcgtggtt taacatgatt cttgggcgca ctgctttgcg catgtttggc
       61 acaataccat ccgtgcttca tggaatggtt aagttttctg caaataaggg tattggcatg
      121 ctcacttctg cggtggttat gacattttat atcgcaaagt catactgtgg tccaatgatg
      181 cgatgtgtgg gcccaattga agcagaaatg ataattgatg aagtgcataa cggttcttgt
      241 gcattacatt caggaaatga aataaactat gcgccgatta agaaatttgt gtatgcgctc
      301 atattaacat cgcgaaggct aagaagatat ttccaagggc atccggtgca cgtgttaact
      361 aacatgccgg tcaagcaagt cttaacaaaa ccagagatat ctggtagact cgcattgtgg
      421 gcagtggagt taggtgctta tcaaatttct taccttccgc gcagcgctgt aaagggccaa
      481 gttttggcgg attatctcgc tgaaatgact ggggagttgg aggtgattaa tgagcgaaca
      541 gagttaaaac cagtagttgg cgaaacatgg gatttattta ctgatggagc ttcttgtgca
      601 gaaggcgcag gtgcgggttt ggttttggca agcccaagtg gtgaggagca tacgtacggg
      661 ttacgtttta attttgatgt gacaaataat gaagcggaat atgaagcctt gcttgctggt
      721 ttaaatattg cgcaaaaaat ggatatcact aagttgcgag catttacaga ttcgcaatta
      781 gtggcaaatc agtttaatgg ctcttttgag gcacatgatt cctcaataca gaaatatttg
      841 cagttgttga aagaattagc aatgcggttc gagcattttg aactcgcgca agtgccaaga
      901 agtcaaaata agaaggcgga tgctttaagt aagttggccg ctctaacgtt ttcacacttt
      961 caaaaacaag tttgggttga ggaattgcca agcaagtcaa tagataacga cttaatggtc
     1021 gcgtcggttg tagaagacca gccaaattgg atggaaccaa tcctacaaca catccgcagt
     1081 gatatttttc caagtgataa gcgcgaagct cacttagtaa gagagcgagc accaatgtat
     1141 atcattcaaa atgatatttt atatcgcaag tcatactgtg gtccaatgat gcgatgtgtg
     1201 ggcccaatta aagcagaaat gataattgat gaagtacata acggttcttg tgcattgcat
     1261 tcaggacctg gtaatgtcaa attcctgatt gcggcaattg actatcttac aaaatgggtt
     1321 gaagctaagg cagttcgtac tatcactggt gtgcaagtgc gaaattttgt gtggaagtat
     1381 attgtttgca gatttggtat tccgcgtgaa ttagttagcg acaacggcga atgtgtactg
     1441 cgaaataatg atgcaagtag agcagaaaaa cttggcaaat taggacctaa ctgggagggt
     1501 ccttatcaag ttgtgacaat taatgcagca ggttcatata agctcgcaga tgtggaagta
     1561 cgaactttac ctaatgcgtg gcatgccgct ttattaaaac gatactatgc gtaa
//
LOCUS       XM_071832902             915 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842798), mRNA.
ACCESSION   XM_071832902
VERSION     XM_071832902.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..915
                     /gene="LOC139842798"
                     /note="uncharacterized LOC139842798; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842798"
     CDS             1..915
                     /gene="LOC139842798"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689003.1"
                     /db_xref="GeneID:139842798"
                     /translation="MEDSQVYFKDTFIKTVGDGGNTLFWKEHWIGDDKLCNLFPRLFR
                     LDLQPDATIKDRRGDDDFESSAVWRWKREPNGRVRTELDTLLKILSTSSFNCRIKDKW
                     NWSLATNAIFKVKTLSSIIDEQFLGSSDSAHGTIRNKLVPKKLEIFVWRALKGRLPVR
                     VELDKRGIDLHSVRCPLCDDDLESVEHSLVSCKHASEVWDRIFRWWNMGNFNNSCLSN
                     VLGESNNPIAGSNFGKSFWLAIRWIGAYFVWKNRNNMVFRGKCWNPPAALNEIQTVSF
                     EWISNRTRRKKIDWHTWLSNPNVYLTQI"
     misc_feature    <397..594
                     /gene="LOC139842798"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaagact cacaggttta tttcaaagac acattcataa agacggtggg cgatggcggt
       61 aatacactat tctggaaaga gcattggatt ggagacgata agctatgtaa tctcttccca
      121 agattattta gacttgatct ccaacccgat gcaacaatca aagaccgaag gggtgatgat
      181 gattttgaaa gctcggcagt ctggagatgg aaacgagagc caaatggaag agttagaact
      241 gagctggata cactactcaa gattttatca acatcgtctt ttaattgcag aatcaaagac
      301 aaatggaatt ggtcactagc aacgaatgct attttcaagg tcaagacgtt atcttcgatt
      361 attgacgagc agttcctggg ttcatcagat tcagcgcatg gtactatacg aaataaattg
      421 gtaccaaaaa aacttgaaat cttcgtatgg agagcattaa aaggtagact accggtaaga
      481 gtcgagctag ataaacgggg tattgacctt cacagtgttc gttgcccgct atgcgatgac
      541 gacttggaat cagtggaaca ctcattagtt tcgtgcaaac acgcgtctga ggtgtgggac
      601 cgtatttttc gatggtggaa tatgggtaat tttaataact cgtgtttatc taatgttctc
      661 ggtgaaagca acaatccaat cgcaggttcg aacttcggga aatctttctg gttagctatt
      721 agatggattg gtgcgtattt cgtttggaaa aatcggaata acatggtgtt ccgaggaaag
      781 tgttggaacc ctccggcagc gcttaatgaa atacaaaccg tatctttcga atggatttca
      841 aatagaacga gaagaaagaa aatcgattgg catacttggt tatctaatcc gaacgtgtac
      901 ctcacgcaaa tatga
//
LOCUS       XM_071832904             684 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842799), mRNA.
ACCESSION   XM_071832904
VERSION     XM_071832904.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..684
                     /gene="LOC139842799"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842799"
     CDS             1..684
                     /gene="LOC139842799"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071689005.1"
                     /db_xref="GeneID:139842799"
                     /translation="MRLIPYASVVGSLVYAQVCPDIAYITGMLGRYQSNPGMDHWKAA
                     KKVLRYLQGTKDLILTYRRMDNLEVMGYSDSDFAKCKDDKKSTSGYIFMLSGGPISWK
                     SHKQELTTTSTMMAEYVACYHASSHAILLKNLISRLKVVDSISEPIRLYCDNSAAVSF
                     SNSTSSSGAGLYLNTKYLYVRERVEEKSIAIEYVRTNDMLADPLTKGLPSKLFLEHVA
                     GMGLCNNLI"
     misc_feature    100..>264
                     /gene="LOC139842799"
                     /note="2-oxoglutarate decarboxylase/ hydro-lyase/
                     magnesium ion binding / thiamin pyrophosphate binding;
                     Region: PLN02980"
                     /db_xref="CDD:215530"
     misc_feature    208..633
                     /gene="LOC139842799"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(220..231,334..342,349..351,457..459,535..537,
                     616..618)
                     /gene="LOC139842799"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgagactta taccatatgc ttcggttgtt ggaagtcttg tttacgctca agtttgtcct
       61 gatatcgctt acataacggg catgcttgga cgttatcaat ccaatccagg aatggatcat
      121 tggaaagcag ccaaaaaggt tttgcgatat cttcaaggaa ctaaggattt aatattgact
      181 tatcgaagaa tggataacct tgaagttatg ggttactcgg actccgattt tgccaaatgt
      241 aaggacgata agaaatccac ttcagggtac atttttatgc tttcaggggg tcctatttca
      301 tggaagagtc ataagcaaga attaaccacc acttctacca tgatggctga gtatgttgca
      361 tgttatcacg ctagtagtca tgctatttta ctcaagaact taatttctag acttaaggtg
      421 gttgactcta tatcagaacc cattagacta tactgtgaca atagtgctgc tgttagtttc
      481 tcaaatagca ctagttctag tggagctggt ttgtatctca atactaagta cttgtacgtt
      541 cgagaaagag ttgaagaaaa gagcattgcc attgagtacg tacgcactaa tgacatgttg
      601 gctgatccac ttacaaaagg tttaccttcc aagctctttc tagagcatgt tgccggcatg
      661 ggattatgta ataaccttat ttaa
//
LOCUS       XM_071832905            5975 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides phosphatidylinositol
            4-kinase alpha 1-like (LOC139842800), mRNA.
ACCESSION   XM_071832905
VERSION     XM_071832905.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5975
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..5975
                     /gene="LOC139842800"
                     /note="phosphatidylinositol 4-kinase alpha 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842800"
     CDS             1..5871
                     /gene="LOC139842800"
                     /codon_start=1
                     /product="phosphatidylinositol 4-kinase alpha 1-like"
                     /protein_id="XP_071689006.1"
                     /db_xref="GeneID:139842800"
                     /translation="MEALTECIDLIIKNPNQYSCKIAWLCKRCPSSESLLSGCPCISR
                     SQLNAVLATARFISLCHNYDDTNPRMTVLAFIRSIPSSFTQSFWPTSFTTASITLFYN
                     DFLSYVVKAADHYQDFNTDVAGFMGGIVFAALDDFSFNNNNNNNGASSDLGISKAFLY
                     ALSESFPQIVPLDANKLVTRLLDVPFSSVDVSGSSGANNMDGVSTPANVDSKGVSYFK
                     DESIECLEKQEIALKLIERVLDKVQIDSNLLEQIRLIAKEQMRLMISFLKIRKHDWTE
                     QGSSLKARINLKLSVYKAAAKLKYRSHVISDSDGKLSKKLLHGALALLVEAAEACLYS
                     VWRRMRTCEDLFDTLLDGISKIAFTRGGHLLRVLLIRFKQLTETWECSQGAMLDSVLK
                     TSCEIIEYGWNKDRTPVDTFIMGLATSIREHNDYEEKDAKEKKAVPVVQLNVIRLLAE
                     LNVQVNKSEVVDTILPLFIEYLEEGDASTPSLLRLRILDAVSRMASLGFEKSYREVVV
                     LMMRSYMSKLSSIGSAESNTLPEEANTERLETLPAGFQLIARGITDNKLRADYRHRLL
                     SLCSDVGLAAESKSGSCGADFMGPLLPAVAEICSDFDPTMDVEPSLMKLFRNLWFYIA
                     LFGLAPPVLNSSKSNPTTSVSAGSSTAVSLQAVNGPYMWNPQWSSAVQRISQGTPPLV
                     VSSVKWLEDELELNALHKPGSRRGSGNEKAAASQRAALSAALGGRVEVGAMSTISGVK
                     ATYLLAVAILEIIRFRSNGGLLNCSSNSKASRSAFSCAFEYLKSPNLVPAVFQCLTAT
                     VHCAFDTSLSWLEDQIFETGHATDVRESTLAVHACFFIKSLSQRDEHIREVSVKLLSQ
                     LRDRFPQILWNSSCQDFLLFSVHNDPPSGIVSDPAWIASVRSLYQKIVREWIIISLSH
                     APCTSQGLLQEQLCKANVWQRAQPTTDVVSLLSEIRIGTGKSDCWTGTKTANIPAVMA
                     AAAASSGGNLNLTEAFNLEVLSTAIVSATVKCNHSGEIAGMTRLYENMEKADDDFEAA
                     PSSSPSGLSRLISGAFPQAPQPKKESFGSILLNKFVRLIQKFVFSAEKGGEVDKSSFR
                     ETCSQAAALLLSTLDSDSKTNVESFSQLLRLLCWCPAYISTIDAMETGIFIWTWLVSA
                     APQLGPVVLAELVDAWLWTIDTKRGLFASDTRYSGPAAKLRPHLSPGEPESPPEKDPV
                     QQIQAHKLWIGFFIDRFEVVQHDSMVQLLLLGRMLQMTTKLPWKFSHHPAAAGTFFTV
                     MLLGLKYCSCQYRGSLQKIRMGIQLLEDGIYRAALGWFAHEPEWYESVQGNFAHSEAQ
                     SVSTFVQFLQNQQTDSRGPGENGSSLVNMNDKCHPVWGPMENYAAGREKRKQLLLMLC
                     QHEADRLEVWAQPVNSKESAYSKLRFSADKWVEYARTAFAVDPRIAFSLGARFPTNSF
                     LKAEITQLVQSHILEIRNIPEALPYFVTPSAVDENSPLLQQLPYWAACSITQALEFFT
                     PAYKGHPRVMAYILRVLESYPPSKVTFFMPQLIQALRYDDELLVEAYLLRAAQRSDVF
                     AHILIWQLQGETCAPEGGKEAITAKTEEFLALLPVVREHIIDGFGPEARDVFRREFDF
                     FEKVTSISGVLYPLPKEERRAGIKRELEKIQLDGEDLYLPTAPNKLVKGIQVNSGIPL
                     QSAAKVPIMITFDVADKDGDPNDIKPQACIFKVGDDCRQDVLALQVISLLRDIFGAIG
                     LNLYLYPYGVLPTDPERGIIEVVPNSRSRSQMGETTDGGLYEIFQQDFGPVGSPTFEA
                     ARENFIVSSAGYAVASLLLQPKDRHNGNLLFDNEGRLVHIDFGFILETSPGGNMRFES
                     AHFKLSHEMTQLLDPSGAMKSDTWHLFESLCVKGYLSARRHMNGIINTVLMMVESGLP
                     CFSRGDPIGNLRKRFRPEMSEREAANHMIHICADAYNKWTTAGYDLIQYLQQGIEK"
     misc_feature    694..4188
                     /gene="LOC139842800"
                     /note="PI4-kinase N-terminal region; Region: PI4K_N;
                     pfam19274"
                     /db_xref="CDD:437106"
     misc_feature    4246..4785
                     /gene="LOC139842800"
                     /note="Phosphoinositide 3-kinase family, accessory domain
                     (PIK domain); PIK domain is conserved in PI3 and
                     PI4-kinases. Its role is unclear, but it has been
                     suggested to be involved in substrate presentation.
                     Phosphoinositide 3-kinases play an important role in...;
                     Region: PI3Ka; cl00271"
                     /db_xref="CDD:412275"
     misc_feature    4966..5865
                     /gene="LOC139842800"
                     /note="Catalytic domain of Type III Phosphoinositide
                     4-kinase alpha; Region: PI4Kc_III_alpha; cd05167"
                     /db_xref="CDD:270711"
     misc_feature    order(5002..5004,5008..5013,5017..5019,5023..5025,
                     5092..5094,5098..5100,5107..5109,5200..5202,5236..5247,
                     5260..5262,5269..5271,5434..5436,5440..5442,5470..5475)
                     /gene="LOC139842800"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270711"
     misc_feature    5410..5436
                     /gene="LOC139842800"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270711"
     misc_feature    order(5473..5505,5512..5523,5527..5544)
                     /gene="LOC139842800"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270711"
ORIGIN      
        1 atggaagcat taacagagtg tatcgattta atcataaaaa atccaaatca atattcctgc
       61 aaaatcgcat ggctttgcaa acgatgtccg tcatcggaat cactcctttc cggttgccct
      121 tgcatttcac gttctcaact caacgccgtt ctcgcaaccg ccagattcat ctcactgtgt
      181 cataattacg acgatacaaa ccctagaatg accgttttag cattcattcg ttcaattccg
      241 tcgtcattta cccaatcatt ctggcctaca tcatttacaa ccgcttcaat aactttattt
      301 tacaatgatt tcttatcgta cgtcgtaaaa gcggccgatc attatcagga tttcaatact
      361 gatgttgctg gttttatggg aggtattgtg tttgctgcac tggatgattt tagttttaat
      421 aacaataata ataataatgg agctagtagt gatttaggta tatctaaggc ttttttatac
      481 gcgttgtccg aaagttttcc gcagattgtt ccattagatg cgaataaact agttactagg
      541 ctacttgatg ttcctttttc gagtgttgat gtaagtggtt cgagtggtgc taataatatg
      601 gatggagtga gtactccagc taatgtagat agtaaaggtg tttcgtattt taaagacgag
      661 tctattgagt gtttggagaa acaggagatc gcattgaagt tgatagaacg cgttcttgat
      721 aaagttcaga ttgattctaa tcttctggaa cagatacgcc ttatcgctaa ggagcaaatg
      781 cggttgatga tttcatttct gaagataagg aagcatgact ggacagagca gggttcttca
      841 ctgaaagcta gaattaattt aaagctttct gtttataagg ctgctgctaa attaaaatat
      901 agaagccatg tcatatctga ttcagatggg aagttatcga agaagctgtt gcatggggct
      961 cttgcgttgc tggtagaagc agccgaagct tgtctttact cagtgtggcg taggatgaga
     1021 acatgtgaag atcttttcga cacattgctt gatggaatct ccaaaattgc ttttacacgt
     1081 ggaggtcatc tactaagggt tctacttatc cggtttaagc agcttaccga gacttgggaa
     1141 tgtagccagg gagctatgtt agatagtgtt ttgaagacaa gttgtgagat aattgagtat
     1201 ggttggaaca aagaccgtac cccggttgat acatttatca tgggattggc tacaagtatt
     1261 cgcgaacaca atgattatga ggaaaaggat gctaaagaga agaaggctgt gcctgttgta
     1321 cagctcaacg ttatccgatt acttgcagag ctaaatgtac aagttaacaa gtctgaagtg
     1381 gttgacacaa tattgccctt attcattgaa tatttagagg agggtgatgc ttcaacacct
     1441 agcttgttgc gcctccggat tcttgatgcg gtttctcgta tggcaagttt agggtttgag
     1501 aagtcgtatc gtgaagttgt ggtgttaatg atgaggagtt acatgagcaa actgtcctcc
     1561 attggatctg cagaaagtaa tacattgcca gaagaagcca atacagaacg tcttgagact
     1621 cttcctgcag gatttcaatt gatagctaga ggcattacag acaataaact acgagccgac
     1681 taccgtcatc gcctgttatc gttatgttca gatgtgggct tggctgctga gtccaaaagc
     1741 ggaagctgtg gtgctgattt tatggggcct ttacttcctg ctgtggctga aatatgttct
     1801 gattttgatc cgacgatgga tgttgaacct tcacttatga agctatttcg taatctatgg
     1861 ttctatattg cactgtttgg tttagcacct cccgtgttaa attcttcaaa gtcaaatcct
     1921 acaacatcag tcagtgcagg gagctcaacc gcagtttctt tacaagctgt aaatgggccc
     1981 tacatgtgga atcctcagtg gtcttctgct gttcaacgta tttctcaagg gaccccaccc
     2041 ctggttgtta gctctgtaaa atggcttgaa gacgagttag aacttaatgc acttcataaa
     2101 cctggaagtc gcagaggcag cggaaatgaa aaagctgctg caagtcaaag agcagcactt
     2161 tctgctgctt taggaggccg tgttgaggtt ggcgcaatga gcaccatttc aggagtgaag
     2221 gcaacttatc ttcttgcagt tgcaattttg gaaataatac ggttcagaag caacggtgga
     2281 cttttgaact gtagttctaa ttctaaggca tctagaagtg catttagttg cgcttttgag
     2341 tatctcaaaa gtccaaatct tgtgcctgct gtttttcagt gcttaacggc cactgtccac
     2401 tgtgcttttg acacatcatt atcatggctg gaggatcaaa tatttgagac ggggcatgcc
     2461 acggatgttc gagagtcaac tcttgctgtc cacgcatgtt ttttcatcaa gagtttgtct
     2521 caaagagacg aacacattcg agaagtgtca gttaaactct tatctcaact gagagataga
     2581 tttccgcaga tattgtggaa ttcatcttgt caggattttc ttctattttc tgtacataat
     2641 gacccacctt ctggtattgt tagtgatcct gcttggatag cttccgttcg atctttgtac
     2701 caaaaaattg tacgtgaatg gattattatt tctctgtcac atgctccttg caccagccaa
     2761 ggacttctcc aggaacaact ttgtaaagca aacgtgtggc aaagggcaca gcctacaacg
     2821 gatgtcgttt ctcttttatc tgagatacgg atcggtactg gcaaaagtga ttgctggaca
     2881 gggaccaaaa ctgcaaatat tcctgcagtg atggctgcag cagctgcttc atcaggggga
     2941 aatcttaact taacggaagc gtttaatctg gaagttctta gcacagctat cgttagtgca
     3001 accgtcaaat gtaaccactc tggagaaatt gctggtatga caagattgta tgagaatatg
     3061 gagaaagcgg atgatgactt tgaagctgca ccatcttcta gccctagtgg tctttcaaga
     3121 ttgatatctg gagcatttcc tcaagcacca caacctaaaa aggaatcatt tggttcgata
     3181 ttactgaata aatttgtacg gcttattcaa aagtttgttt tcagtgctga gaaaggtggt
     3241 gaggtggaca agtcttcttt tagagaaact tgttctcagg cagctgcatt gcttctatca
     3301 actctggact cagattccaa aacgaatgta gagagctttt cgcaactcct gcgtcttctt
     3361 tgctggtgtc cggcttacat ttccacaatc gatgcaatgg agactggtat attcatttgg
     3421 acttggttag tttccgctgc tcctcaatta ggccctgtgg tccttgcaga gcttgttgat
     3481 gcatggttgt ggacgataga tacaaaacga ggtctatttg catctgacac gaggtattca
     3541 gggccagctg caaagttaag acctcatcta tcacctggtg aaccagaatc accacctgaa
     3601 aaagaccctg ttcaacaaat tcaagcacat aagctttgga ttgggttttt cattgatcgt
     3661 ttcgaggttg tgcagcatga tagtatggta cagcttttgc tacttggcag gatgttacaa
     3721 atgactacaa aacttccatg gaaattttca caccatcctg ctgctgctgg tacatttttc
     3781 actgtaatgt tgcttggctt gaaatattgc tcgtgccaat atcggggcag tctacaaaaa
     3841 attagaatgg gaattcagct actggaagac gggatttatc gggccgcgtt aggttggttt
     3901 gctcatgaac ctgaatggta tgaatctgtt caaggaaatt ttgcacatag tgaagctcaa
     3961 tctgtttcta catttgtcca atttctccaa aatcaacaaa ccgattcaag aggaccgggt
     4021 gaaaatggga gctctttagt taatatgaac gataagtgtc accctgtttg gggaccaatg
     4081 gagaactatg cagctggtag agagaagagg aaacagttac ttttaatgct atgccaacat
     4141 gaagctgata ggctcgaagt ttgggctcaa cctgttaact ccaaagagag cgcatattcc
     4201 aaacttagat ttagcgcaga taaatgggtc gagtatgcta gaactgcatt tgctgttgat
     4261 ccccggattg ctttctcttt gggtgcaagg tttccaacta actcttttct aaaggctgaa
     4321 attactcagt tggttcagtc acatatattg gagattcgta acatcccaga ggctttacca
     4381 tattttgtaa ccccttcagc cgtggatgaa aattctcccc ttttgcaaca attaccatac
     4441 tgggcagctt gctcaattac acaagctcta gagtttttta caccagcata taaaggccac
     4501 ccacgtgtta tggcttacat tcttcgggta cttgagtctt accctccctc caaagtaact
     4561 tttttcatgc cccagctcat tcaagctttg aggtatgatg atgagttgtt ggttgaagct
     4621 tacttgctta gagctgctca aaggagtgac gtgttcgctc atatcctaat ctggcagtta
     4681 cagggcgaga cttgtgcacc agagggaggt aaagaagcaa tcacagcaaa gactgaagaa
     4741 tttctggctc tgctgccagt ggttagagaa cacatcattg acggtttcgg tcctgaagcc
     4801 cgtgacgtgt tccgcagaga attcgatttc tttgaaaaag tgacatctat atcaggtgtt
     4861 ctctatccac ttccgaaaga agaaaggaga gctggcatta agagggagtt ggaaaaaatt
     4921 cagttggatg gtgaagacct ttatctacct acagctccta ataaacttgt caagggtatt
     4981 caggtgaata gtggaatccc gttgcagtcg gcagcaaaag tcccaattat gatcactttt
     5041 gatgtggctg ataaagacgg tgaccctaat gatataaaac ctcaagcttg tatttttaag
     5101 gtcggagatg actgtagaca agatgtactt gctttacaag tgatttcact tctaagagat
     5161 atatttggag caattggact aaatctttat ttgtatccgt acggagttct tccaactgac
     5221 ccagagagag gaataattga ggttgtgcca aattcgcgca gtagaagtca gatgggtgaa
     5281 acaactgatg gtggtttgta tgaaatattt caacaagatt tcggtccagt tggttctcca
     5341 acgtttgaag cagcccgtga aaatttcata gtcagcagtg ccggttacgc tgttgcgagt
     5401 ctgttgcttc aaccgaagga tcggcataat ggaaatcttt tatttgataa tgaaggtagg
     5461 ctcgtacaca ttgattttgg tttcatcctg gagacatcac ctggtgggaa tatgcggttt
     5521 gagagtgccc atttcaagct gagtcatgag atgactcagt tgctcgatcc atctggtgcc
     5581 atgaaaagtg atacttggca tttgtttgaa agtttgtgcg ttaaggggta cctttctgcc
     5641 cgtcggcaca tgaatgggat tataaacacg gtattgatga tggtagaaag tgggttaccc
     5701 tgctttagca gaggagatcc cattgggaac ttaagaaaga gatttcgtcc agaaatgagc
     5761 gaacgagaag cagcaaatca catgatccac atatgcgctg acgcctataa taaatggact
     5821 actgctggtt atgatttaat tcagtatttg caacaaggca ttgaaaagtg aacaatgcat
     5881 gtacatacat ttgagatcat ttttgcagtt ttcaaaattg gattcttttc agcaggttag
     5941 tatcattttt atttgttttt tactttttat attta
//
LOCUS       XM_071832906            1064 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842801), mRNA.
ACCESSION   XM_071832906
VERSION     XM_071832906.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1064
                     /gene="LOC139842801"
                     /note="uncharacterized LOC139842801; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842801"
     CDS             1..756
                     /gene="LOC139842801"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689007.1"
                     /db_xref="GeneID:139842801"
                     /translation="MDMINDSTRDFRRISQSGTIVLLLLWHLVHFIRSVLYFIREMLR
                     AIESYLITNGFVNTYDDLNLKRVKYLGIVVDSDEARNMSKVVELLEWLSAIGVKKVCL
                     YDRDGVLKKSKKVLMERFGYAEISDENSKTAPLVRKKRMDFEFVSITDGKEAVAKAAN
                     LLFEKYYVNGDSEKPFFTETHLTEALKTLGAVEPDPDLILIYGPARCHLGFPAWRIRY
                     TEIVHMGPLKYKKYGLILKAIHRFTKVKQNYGS"
ORIGIN      
        1 atggatatga taaacgattc aacaagggat ttccgtagga tctcacagag tggcacaatt
       61 gtgcttcttt tgctgtggca tcttgtacat tttattcgaa gtgtcttata ctttatccgg
      121 gagatgctgc gtgcaattga aagctacctt ataacaaatg gatttgtgaa tacgtacgat
      181 gatcttaatt taaagcgggt caagtatctt ggaattgttg tggatagtga tgaagcccgt
      241 aacatgtcaa aagttgttga gcttttggag tggctttcag ctattggtgt gaaaaaagtc
      301 tgcttatatg atcgtgatgg agtgttaaag aagtcaaaga aagtcttgat ggagagattt
      361 ggctatgcag agatatctga tgagaattca aaaacagctc cccttgtcag aaaaaagcgg
      421 atggattttg agtttgtttc gatcactgat ggtaaagaag cagttgctaa agcagctaac
      481 ctactctttg aaaagtatta tgtaaatgga gattcagaaa aaccgttctt tactgaaaca
      541 cacttgaccg aggcattaaa aaccctaggt gccgtagagc cagatcccga tcttatacta
      601 atttatgggc ccgcaaggtg ccaccttggt tttccagcat ggcgtattcg ttacacagag
      661 attgtacaca tgggaccact caagtacaag aaatacggtt tgattttgaa agccattcat
      721 aggttcacta aggtgaagca aaactacggt tcttaaaatt caaatacaag agaggttgct
      781 atatgaaggg agcatatgta tgtaactgtt acatgaagcc acttccatct ataaattctt
      841 ctacataagg ttaagatcag caatattgaa gtctagggtc cttacagtgg ggattaagct
      901 atgattgtgt gctatataag tggatcggtt ctctttaatt tagttcaagt gataataggt
      961 cctgactgta taaaataatg tttgaattgt atttcatatg attatatatt tgttgatagc
     1021 aagtaaatgg ttattacaaa gttatcctct atgtttacag aagt
//
LOCUS       XM_071832907             471 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842802), mRNA.
ACCESSION   XM_071832907
VERSION     XM_071832907.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..471
                     /gene="LOC139842802"
                     /note="uncharacterized LOC139842802; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842802"
     CDS             1..471
                     /gene="LOC139842802"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689008.1"
                     /db_xref="GeneID:139842802"
                     /translation="MAMSMFATKCWRSISSHNKSYETILKSQRAFISSSTTDTAKAKL
                     KSRADLFPIYILLGFTGGAVFLAVTSVTQQLVRHPGVQVNKNNRSMVPEVDSPETTLA
                     SGDEFITKSILRKVAHIQKRDDVVPTDTPDIYTQRSGDSTNLKTVGVEPRSNRG"
     misc_feature    139..>282
                     /gene="LOC139842802"
                     /note="NADH-ubiquinone reductase complex 1 MLRQ subunit;
                     Region: B12D; pfam06522"
                     /db_xref="CDD:461937"
ORIGIN      
        1 atggctatgt caatgtttgc tacgaaatgt tggcgatcga tttctagcca caacaaatcg
       61 tatgaaacga ttctaaaatc acaacgcgcc ttcatttcct caagcaccac ggacactgct
      121 aaggccaagc ttaaatcaag agccgatctt ttcccaatat atatcttgct tggatttacc
      181 ggtggagcag tgttccttgc ggttacgagt gttacgcaac agctggttcg ccaccctggt
      241 gtgcaggtta acaagaacaa cagaagcatg gttccagagg ttgatagccc agaaacgacc
      301 ctggcttctg gagacgagtt tattacaaag tcaatactca ggaaagtggc tcacattcag
      361 aaacgtgatg atgtggtccc cacggacacc cctgacatat acacgcagcg atctggtgac
      421 tctacaaacc taaaaacagt gggagtggaa cctagatcca atcggggtta a
//
LOCUS       XM_071832908             788 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842803), mRNA.
ACCESSION   XM_071832908
VERSION     XM_071832908.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..788
                     /gene="LOC139842803"
                     /note="uncharacterized LOC139842803; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842803"
     CDS             252..788
                     /gene="LOC139842803"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689009.1"
                     /db_xref="GeneID:139842803"
                     /translation="MRMKKVLTAEEIAGISFRKQDVDKQLEQAAASEHVEETPAESGN
                     KRKAAGTSEAQKKKKKTPKQLEDMRNDNFVAIEPRSADLPPPINEHVEETQPTTPRVN
                     PELQATATSKDKAIPVESESTLPPPQGSFRVANLRQLCQSSAENAAEQSAFLQTGHFT
                     RFVDLRFRHFKACFRPPV"
ORIGIN      
        1 aagatgtgaa caagatgcca gcgttggatg acgaggagaa aaagttgttg aagcagtgcg
       61 tcaacgcaca actggtgcac cgttcgtatg gtaatgttat gctgcggttg gggaagatct
      121 ccgcgtattg gccttgggag gatgtgcggc cggccatagt tggccccgat ggaaagggta
      181 ggaatagcat aaacgcgtac ttacataaat ttttgtatat tttctaacgc aggcgtttat
      241 tgtttgcaga gatgaggatg aagaaggtgc ttaccgcgga ggagattgct gggatctctt
      301 tccgcaagca ggatgtggac aaacagctag agcaggcagc tgctagcgaa catgtggagg
      361 aaacgccggc ggagtcaggc aataaacgca aggcggctgg gacgtccgag gctcagaaga
      421 agaagaagaa gactcctaag cagctggagg atatgcgcaa cgacaatttt gttgccatcg
      481 agccgcggtc cgcagaccta cctcccccca ttaatgagca tgtggaggag acgcagccaa
      541 caacaccgcg ggtcaacccc gagctgcagg ccactgccac atccaaagac aaggcgatcc
      601 ccgtcgagtc tgagtctaca ttacctcctc cgcaaggcag cttccgtgtt gccaacctcc
      661 gccaactttg ccagtcctcc gcagaaaatg ctgcggagca atctgcattc ttgcaaacgg
      721 gacatttcac ccgctttgtc gacctgcgtt ttcgacactt caaagcgtgt tttcggcccc
      781 cggtttaa
//
LOCUS       XM_071832909            2595 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable LRR receptor-like
            serine/threonine-protein kinase At2g16250 (LOC139842804), mRNA.
ACCESSION   XM_071832909
VERSION     XM_071832909.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2595
                     /gene="LOC139842804"
                     /note="probable LRR receptor-like serine/threonine-protein
                     kinase At2g16250; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139842804"
     CDS             1..2442
                     /gene="LOC139842804"
                     /codon_start=1
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At2g16250"
                     /protein_id="XP_071689010.1"
                     /db_xref="GeneID:139842804"
                     /translation="MTICVSLIALLLLSLLLSGTALQQQQQSLQSGSLNSRVERAALF
                     QLRSTLGVRTKQWPIKTDPCLTWTGIVCSENGTVTEINISGFKRTNTGSQTPRFSVDS
                     LANFTQLVSFNASGFLLPGSIPDWLGIQVKTLKFLDLRFCEITGGVPYSIGNLTNLSE
                     LYLSGNNLMGSIPSSLGMLSRLMVLDLSINSLTGSIPSSFGNLLNLHYLNLSRNSFSS
                     FVPSQLGSLASLVVIDLSFNAFSGRLPKSLGNLRNLSIMMINDNNFTGELPYALWSLP
                     GLRFFDASYNSFLGSLPNISLNANVTRATFNLSHNMFYGVLTNVVRSFSFVDLSYNYF
                     QGKLPDCTRDVAILDRNCFRSCSNQRKLKECALFYSRKGLLFDNFGLTTLRDRKSKHI
                     MIILVVAVFGSLGFTILLATLVILLIVCSRKKRRTSQTGTGVEPAEGYGEMFAYEKIV
                     AATGGFNESNFIRNGHSGDIFMGVLGLGTCIIVKRFDLQSGKNTYTVESDIFSKISHH
                     RFVPLLGHCLEKEKGEFLIYKYMPNGDLSSSLYKNNGSDDDILKSLDWITRLKIAVGA
                     AEGLSYLHHECSPPIVHRDVQASSILLDNKYEVQLGSLSDACTPEGDRNSKRITRLLR
                     LSQTSDQSVSGIATATCAYDVYCFGKVLLELVTGIIGISASNDSTTKDLLEGILSSIS
                     TYDKELVTDIMDPTLVVDEDLLEEVWAMAIIAKSCLHPKPSKRPLMRFVLKALENPLK
                     VVREKTTNSTELRASSSNKCSCGGASWRHSLPRQVGGSQLQDSVDRCLSTIKHSKDVF
                     REPLVVQDEERLNED"
     misc_feature    <304..2268
                     /gene="LOC139842804"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    400..471
                     /gene="LOC139842804"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    472..543
                     /gene="LOC139842804"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    544..615
                     /gene="LOC139842804"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    616..687
                     /gene="LOC139842804"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    688..759
                     /gene="LOC139842804"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    760..831
                     /gene="LOC139842804"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    889..972
                     /gene="LOC139842804"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1393..2211
                     /gene="LOC139842804"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(1393..1395,1402..1404,1408..1410,1444..1446,
                     1450..1452,1531..1533,1582..1593,1753..1755,1765..1770,
                     1774..1776,1804..1809)
                     /gene="LOC139842804"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgacaatct gtgtaagttt gatcgcactg ttattactat cgttactgct ttctggaact
       61 gcattgcaac agcaacaaca atcactgcaa tctggttcac tgaattcacg tgtagaacgg
      121 gcggctctgt ttcagcttag gtcaacatta ggggtaagaa caaaacaatg gcctattaaa
      181 actgatccgt gcttaacttg gactggtatt gtatgtagtg aaaatggtac tgttactgaa
      241 attaatattt caggttttaa aagaactaat actggtagtc aaacccctag gttttcggtc
      301 gattcgcttg cgaattttac gcaattggtt tcgtttaatg cttcagggtt tttacttcct
      361 ggttcgattc cggattggtt agggattcaa gtgaaaactc ttaagtttct tgatctcagg
      421 ttttgtgaaa tcactggtgg tgttccttac agtattggga atttgactaa tctcagtgaa
      481 ttgtatctat ctggtaacaa tcttatgggc agtattccgt caagtttagg gatgctatcg
      541 cgccttatgg ttctcgatct ctcgattaat tcgctgactg gttcaattcc gtcttctttt
      601 gggaacctgt tgaacttaca ttatttgaat ctttctagaa atagtttttc ctcttttgtt
      661 ccttctcaac ttggtagtct tgctagttta gttgttattg atctgagttt caatgcgttt
      721 tctggacgtt tacctaaaag tttagggaat ttaaggaact tgagcataat gatgattaat
      781 gataataact tcactggtga gcttccttat gcattgtggt cactacctgg tttgaggttt
      841 ttcgatgcat cttataatag ttttctagga tctctcccga atattagttt gaatgctaac
      901 gtgaccaggg cgacgtttaa tctctcgcat aatatgtttt acggggtgct gacaaatgta
      961 gttaggagtt ttagttttgt ggatttatct tacaattact ttcaagggaa actacctgat
     1021 tgcacgcgtg atgttgcaat tctggataga aattgcttta gaagctgttc aaatcagaga
     1081 aagttaaaag aatgtgcatt attttactct agaaaagggt tactgtttga taattttgga
     1141 cttactacat taagggatcg taaaagcaaa catataatga tcatactggt ggtagctgtt
     1201 tttgggagtt tagggttcac tatcctctta gcgacattgg ttatattact gattgtatgc
     1261 agtcgtaaga aacgaagaac aagtcaaaca ggaactggtg tggaacctgc tgaaggatat
     1321 ggtgaaatgt ttgcatacga gaagattgtg gcggccactg gtggcttcaa tgaatccaat
     1381 tttattagaa atggccattc aggggatatt tttatgggcg ttttgggtct agggacttgt
     1441 ataatcgtta aaagattcga cctgcagtcg ggaaaaaaca catacacggt agaatcagat
     1501 atatttagta agatttctca tcaccgattt gttcctctat tgggacattg cttggagaaa
     1561 gagaaaggag agtttctgat ttacaaatat atgccaaacg gggatttgtc aagttcattg
     1621 tacaagaata atggttcgga tgatgatatt ttaaagtcgt tggattggat cacgaggttg
     1681 aaaattgcag ttggagctgc ggagggtcta tcatatctgc atcatgaatg ttctccgccc
     1741 attgttcata gagatgttca agctagtagt attcttcttg ataataaata tgaagtgcag
     1801 ttaggaagtc taagcgatgc gtgtacccca gaaggcgatc gtaattcaaa gaggatcaca
     1861 aggttgctac gattatccca gacatcagat cagagtgttt ctggcatagc tacggctaca
     1921 tgtgcatacg atgtttactg ctttggaaaa gtattgctcg agctcgtaac tggtataatt
     1981 ggtattagtg cgtcgaatga ctcaaccaca aaagatttat tagaaggcat cctttcatct
     2041 atcagtacat acgataaaga acttgtgaca gacataatgg atccaacgct ggtagtagat
     2101 gaggatttat tagaggaagt atgggctatg gctataattg ctaaatcttg ccttcatcca
     2161 aaaccgtcaa agagaccact aatgagattc gtactcaaag ctttggaaaa tcctttaaaa
     2221 gttgttcgtg aaaagactac gaactccacc gaactacgag cgagttcctc caataagtgt
     2281 tcttgtggtg gtgccagctg gcggcatagt ttgccacgac aggtgggagg atctcagttg
     2341 caggacagtg tggatcgttg cttgtctact attaagcatt cgaaggatgt atttcgtgaa
     2401 ccgttggttg tgcaagatga agaaagatta aacgaggatt aggataggat tggataggct
     2461 aggatggttt ttcttgatgg aaagatgtcg ggttgttgat atatataaat agtgaaaact
     2521 cgggtttcag atgtcgtgat taactgatgt tccttagttt tggagcttga tagcatgctt
     2581 gaaagttttt gtttc
//
LOCUS       XM_071832910            2307 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-ketoacyl-CoA synthase
            9-like (LOC139842805), mRNA.
ACCESSION   XM_071832910
VERSION     XM_071832910.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 34% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2307
                     /gene="LOC139842805"
                     /note="3-ketoacyl-CoA synthase 9-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 68 Proteins"
                     /db_xref="GeneID:139842805"
     CDS             1..2307
                     /gene="LOC139842805"
                     /codon_start=1
                     /product="3-ketoacyl-CoA synthase 9-like"
                     /protein_id="XP_071689011.1"
                     /db_xref="GeneID:139842805"
                     /translation="MSSFGSKVWQAIEWICVYYIWRNRNNMVFKGKSWSSPLSDVGPL
                     SDIISRRDIFLAGYSEDTSAVDIHGKLGHLGSFTVKTTWDTHRPKSTRVAWYNIVWFT
                     QAIPRHAFTVWWLMREKLKTQDKLMPWDIQSSAPAPTCFFKSKNLIQFHIGSNAWMDI
                     VSILAPIAHRRVARVVVAKLVVAATLYFIWQKRNQRLFKGKARSVDHISQIIFYNVRL
                     KLLSLKFKDSTHMFEVGHFGELGLFSLICLVRQVRASSRSVKLVNPDPPPKTFELPST
                     TTTTLPNYQTNVKIKYVKLGYHYLITNLLTLSLVPLIAITSVHVTQLNFHDLISLYTH
                     LQYHVIAITLVACMAVIGFTSYHMTRPRPIYLVDYSCYRPTDNLKVTYKVFMDHSRLH
                     GAFNESSLDFQRKILERSGLGEETYLPAALHAIPAVPSIRTARQEAEEVMFGALDNLF
                     KSTKINSKDIGILVVNCSLFNPTPSLSSMIVNRYSLRGNIKTFNLSGMGCSAGMIAID
                     LAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCAAVLLSNKSAGKN
                     KSKYKLLHVVRTHYGSDDNAFKCVYQEQDESRNTGVSLSKDLMMAVGGALKSNITTLG
                     PLVLPISEQILFFVNLIARKVIKPGMKPYLPDFKMAVDHFCIHAGGRAVIDEIEKNLR
                     LTEQHVEPSRMTLNRFGNTSSSSIWYELAYTEAKGRMKKGNRVWQIAFGSGLKCNSAI
                     WEAVRTVEPTEHNPWGDCIHRYPVKILS"
     misc_feature    229..>426
                     /gene="LOC139842805"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
     misc_feature    841..2298
                     /gene="LOC139842805"
                     /note="3-ketoacyl-CoA synthase; Region: PLN02377"
                     /db_xref="CDD:166018"
ORIGIN      
        1 atgtcaagct ttggaagcaa ggtgtggcaa gcgatcgagt ggatttgcgt ttattacatt
       61 tggaggaacc gaaacaacat ggtgttcaaa ggaaagtcgt ggtcatcgcc gttgagtgac
      121 gtgggtcctc tgtctgacat tatatctcgc agagacattt ttctggctgg ttattcggag
      181 gacactagtg ctgtagatat tcatgggaaa cttggccact tgggttcgtt cacagtaaag
      241 actacttggg atacccatcg cccaaagtct actcgtgttg cttggtacaa tattgtttgg
      301 ttcacgcaag cgattcctcg tcatgccttt acggtttggt ggttgatgag ggagaagctt
      361 aaaacccaag acaagttaat gccatgggac attcaaagct cagcgcctgc tcctacatgt
      421 ttttttaaat cgaaaaatct tatccaattt catattgggt cgaatgcgtg gatggatatt
      481 gttagtattt tagcgcctat tgctcataga agagtggccc gagtggtagt ggctaaattg
      541 gttgttgctg cgacattgta ttttatttgg caaaagagga accaaagatt gttcaaaggc
      601 aaagcacgct cggttgatca tatttctcaa atcattttct ataatgttcg tctaaagctt
      661 ttgtcgttaa agtttaaaga ttcgactcat atgttcgagg ttggtcattt tggtgagtta
      721 ggtctgtttt ctttgatttg tttggttcgt caggttcgag cctcgtctcg atccgttaaa
      781 ttggtcaatc cagaccctcc acctaagact ttcgagcttc catccaccac caccaccacc
      841 ctcccaaatt atcaaacgaa tgtcaaaata aagtacgtta aattaggcta ccattactta
      901 atcacaaatc ttctaacttt atctcttgta cctctcattg ccattacatc cgtccacgtc
      961 acccaactca attttcacga tcttataagc ctctacactc acttacaata ccatgttatt
     1021 gccatcacgt tggtagcttg tatggccgtg atcgggttta catcttatca tatgacccga
     1081 ccacggccca tttacttagt tgactattct tgttaccgcc ccacggacaa tctcaaagtc
     1141 acatacaaag tattcatgga ccattcgaga ctccacgggg cgtttaacga atcttcacta
     1201 gattttcaaa gaaaaattct tgaacggtct gggctgggag aagaaactta tctcccagcc
     1261 gcattacacg ccatcccagc tgtcccttct ataaggacag ctaggcaaga agcggaagaa
     1321 gttatgtttg gagctcttga taatttattc aaatctacga aaataaattc aaaagatatc
     1381 gggattttgg ttgttaattg tagccttttc aatccaacac cgtcactatc ttccatgatt
     1441 gttaacagat actcccttag aggaaacatt aagacgttta atctaagcgg aatgggttgt
     1501 agcgcaggca tgatcgcgat cgatctagct aaagacatgt tacaagttca ccgtaacacg
     1561 tacgcagtgg ttgtgagtac agaaaatatt actcaaaatt ggtattttgg taataaaaaa
     1621 tcaatgctga taccaaattg tttatttaga gtaggttgtg ccgcagtact tttatcaaat
     1681 aagtccgcag gcaaaaataa gtcaaaatat aaactccttc atgtcgtccg aacacattat
     1741 ggttcggacg acaatgcatt taaatgcgtg taccaagagc aagacgaaag tagaaacact
     1801 ggcgtttcac tttcgaaaga tttaatgatg gctgtaggag gtgctttaaa atcaaacatc
     1861 actacattag gtccactcgt gcttccaata agcgaacaaa ttttgttttt tgttaaccta
     1921 attgcacgaa aggtaattaa acctggaatg aagccgtatt taccggattt taaaatggcg
     1981 gttgatcatt tttgtataca cgccggcggt cgagcagtga tcgatgagat tgagaagaat
     2041 ttacggttga cggaacaaca tgttgaaccg tcacggatga cgttgaaccg gttcggaaac
     2101 acatcgtcta gttcgatttg gtacgagttg gcttacactg aggctaaagg gaggatgaaa
     2161 aaagggaacc gggtttggca aattgcattt ggaagtggat tgaaatgtaa tagtgcgatt
     2221 tgggaagcgg ttcgaaccgt tgaaccaacg gaacataatc cttggggaga ttgcattcat
     2281 aggtacccgg ttaaaatatt gtcttaa
//
LOCUS       XM_071832911             906 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842806), mRNA.
ACCESSION   XM_071832911
VERSION     XM_071832911.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..906
                     /gene="LOC139842806"
                     /note="uncharacterized LOC139842806; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842806"
     CDS             1..906
                     /gene="LOC139842806"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689012.1"
                     /db_xref="GeneID:139842806"
                     /translation="MAELKALDIGNQTVEEYFRKVDSLSTVLCNLGSTLEEDDLATYA
                     INGLNDKFPQASHIILHANPFPNLETVRSMMTLEEMGQRISTSHLPSLNVFRPTGQQP
                     LSAQPTNTAQQLFPPQAHFAAIPQPNSSSHFLPQHNVTRSQVFSGPLQPTLNGSQPSF
                     GSIPPGFSGTHAQNTYGHETIIPRAFSTTTLLDYSNTGWTMDTGASTHLTSSINNLST
                     IFNHCMYPSVVVGEGNSIPVTNTGHSILPNINRPLHLSNVLVTPNIVKNLIFVHRFTR
                     DNKVSVSFAEFGFSVKDYLTRCLLL"
     misc_feature    <34..249
                     /gene="LOC139842806"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggccgaac tcaaagctct tgacatcgga aatcaaaccg ttgaagagta ttttcgaaaa
       61 gtggactctt tgtccactgt tttgtgcaac ctgggatcta cacttgaaga ggatgatctt
      121 gcaacatatg caatcaatgg tttaaatgac aaattcccgc aggcttctca tattatcctc
      181 catgccaacc cattcccgaa cctggaaacc gttcgatcca tgatgacgtt ggaagagatg
      241 ggccagagaa ttagtacatc acacttgcct tccttaaatg tttttagacc tactggccag
      301 caacctttat cggcccaacc aaccaacacg gcccaacagc tattcccacc acaggcccac
      361 tttgctgcca tcccacagcc caactccagc agccattttc ttcctcagca taatgtaact
      421 agatcacagg tttttagtgg gcccttacag cctacactta atggatcaca accaagtttt
      481 gggtctatac ctccaggttt ttccggaacg catgctcaga acacatacgg ccatgagacc
      541 attatcccgc gtgcctttag tactaccact cttctggatt acagtaacac aggttggact
      601 atggacactg gtgcgtccac tcatctcaca tctagcatta ataatttaag tactattttt
      661 aatcattgta tgtatccttc ggttgttgtt ggtgagggga actccattcc cgttaccaac
      721 actggacata gcattttgcc taacatcaat cgcccacttc atttgtctaa tgtacttgtt
      781 acacctaaca ttgttaaaaa tcttattttt gtacatcgtt ttactcgcga taataaagtt
      841 tccgtgtctt ttgccgaatt tggtttttct gtgaaggatt acttgactcg ctgcctgctc
      901 ctctga
//
LOCUS       XM_071832912             999 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pectinesterase 11
            (LOC139842807), mRNA.
ACCESSION   XM_071832912
VERSION     XM_071832912.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..999
                     /gene="LOC139842807"
                     /note="putative pectinesterase 11; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842807"
     CDS             67..999
                     /gene="LOC139842807"
                     /codon_start=1
                     /product="putative pectinesterase 11"
                     /protein_id="XP_071689013.1"
                     /db_xref="GeneID:139842807"
                     /translation="MAVSSSFSSNTDAVLIVVDQSGKGDFKSIQQAINSVASNNSELI
                     YILIKPGVYREKIVVPADKPFITLSGTEGSNTTITWNDGGDIFNSPTMSVMASDFVAR
                     YLTIQNTFGMSGKAIALRVSADRAAFYGCRILSYQDTLLDDYGRHYYYNCYIEGATDF
                     ICGNAASFFENCQLNSLANNLGVITAQHRNSPSENTGFVFAGCKITGLNSGTALGRPW
                     GPFSRVIFANTYMSNTVSPEGWRDWDDPRNQRTVYYREYKCYGPGANRSKRVRWSREL
                     SREESAPFLNKSMIGGRSWLRPTPTHFRKHVHHN"
     misc_feature    67..957
                     /gene="LOC139842807"
                     /note="putative pectinesterase; Region: PLN02432"
                     /db_xref="CDD:178051"
ORIGIN      
        1 tatacatatt tccttgtttt gatattgctt cttaaattaa atccttgcgt tggttggttg
       61 tcatcaatgg cggtttcttc ttctttttct tcgaatacgg atgcagtttt gatagttgtt
      121 gatcaatcgg ggaaaggtga ttttaagtcc atacaacaag ccattaattc agttgcttct
      181 aataattcag agcttattta cattttaatt aaacccggag tttacagaga aaagattgtt
      241 gttccggctg ataaaccttt tataacacta agtgggaccg aaggctcgaa cacgactata
      301 acatggaacg atggtggaga catattcaat tctccaacaa tgtctgttat ggcttccgat
      361 tttgttgcaa gatatctcac aattcaaaat acttttggga tgagcggtaa agctattgcg
      421 ttaagggtat cagcagatcg tgcagcgttt tatggatgtc gaattctttc gtatcaggat
      481 accttgcttg atgattatgg tagacattat tattacaatt gttatattga aggagccaca
      541 gatttcattt gcggaaatgc tgcttctttt tttgaaaatt gccaattgaa ttcacttgcc
      601 aacaatttgg gagtaataac ggctcaacat agaaactcac catcagaaaa tacaggtttt
      661 gtattcgcgg gctgtaaaat aacaggactg aatagtggta cggctctagg aagaccatgg
      721 ggtccgttct ctcgtgtcat atttgcaaac acatacatgt cgaatacagt gtcgccagag
      781 ggatggcgtg attgggacga tccgcgtaat caaaggactg tttactatcg tgaatacaaa
      841 tgttatggtc caggggctaa tagatcaaag agggtgagat ggtcacgtga actaagtcgc
      901 gaggagagtg cacccttttt gaacaagagt atgattggtg ggagaagttg gttaagacca
      961 acaccaaccc acttcagaaa acacgtgcat cataactag
//
LOCUS       XM_071832913             480 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small ribosomal subunit
            protein eS25w-like (LOC139842808), mRNA.
ACCESSION   XM_071832913
VERSION     XM_071832913.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..480
                     /gene="LOC139842808"
                     /note="small ribosomal subunit protein eS25w-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 Proteins"
                     /db_xref="GeneID:139842808"
     CDS             1..378
                     /gene="LOC139842808"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS25w-like"
                     /protein_id="XP_071689014.1"
                     /db_xref="GeneID:139842808"
                     /translation="MRQNANTEYAILGFALMEAPKKEKAPPPSSKPVKSGGGKQKKKK
                     WSKGKQKEKVNNMVLFDKATYDKLLVEAPKFKLITPSILSDRLRINGSLARKAIRELM
                     AKGAIRMVSAHASQQIYTRATNT"
     misc_feature    64..363
                     /gene="LOC139842808"
                     /note="S25 ribosomal protein; Region: Ribosomal_S25;
                     pfam03297"
                     /db_xref="CDD:460876"
     polyA_site      480
                     /gene="LOC139842808"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgagacaga atgctaatac tgaatatgct attttaggct ttgctcttat ggaagcgcca
       61 aagaaggaga aagctcctcc tccgtcatcc aagcctgtaa agtccggtgg tggaaagcag
      121 aaaaagaaga aatggagcaa gggaaagcaa aaggagaagg tgaacaatat ggtgttgttt
      181 gataaagcta cttatgataa gttgctagtt gaagccccta agttcaagct catcactcct
      241 tcgattctat ccgatcgtct taggattaat ggatcacttg caaggaaggc aatcagagaa
      301 ttgatggcca aaggtgcaat ccggatggtt tccgcacatg caagccagca gatttacacc
      361 agagctacca atacttgaaa atgtcttcac tgaatttatc acttgtgtta ggtttagcta
      421 tctaaattca gtttatgtgt ctgtttaaac catattgcat tgttttgatg tggatttgct
//
LOCUS       XM_071832914            2135 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like
            (LOC139842809), mRNA.
ACCESSION   XM_071832914
VERSION     XM_071832914.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2135
                     /gene="LOC139842809"
                     /note="phosphatidylinositol/phosphatidylcholine transfer
                     protein SFH8-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 57 Proteins"
                     /db_xref="GeneID:139842809"
     CDS             213..2135
                     /gene="LOC139842809"
                     /codon_start=1
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH8-like"
                     /protein_id="XP_071689015.1"
                     /db_xref="GeneID:139842809"
                     /translation="MSGPLDRFARPCFEGSSGNDERPERRERSERRERKSDFEYSEDE
                     RRTRIGSLKKKALNASSKFKHSLKKKGSRRKSDGRVSSVSIEDIRDVEELRAVDAFRQ
                     ALILEELLPEKLDDYHMMLRFLKARKFDIEKAKQMWADMIHWRKEFGADTIIEDFEFQ
                     ELNEVLKYYPHGNHGVDKEGRPVYIERLGKVDPNKLMQVTTMDRYIKYHVREFEKSFA
                     FKFPACSIAAKRHIDSSTTILDVQGVGLKNFSKSARELVTRLQKIDGDNYPETLHQMY
                     IINAGTGFRLLWGTVKSFLDPKTVSKIHVLSNKYQNKLLELIDASELPEFLGGTCTCA
                     DKGGCLLSDKGPWNNPEILKLALNSEARRVRQVVKVLNSEGKIVAYAKPQLPGVRSSD
                     TSAESGSDADDIASPKAMRSYSHLRLTPVREEAKTFGGTSYTGQFSEYDEYVPMVDKA
                     VDSGWKKRPLTPKPNDFRGTVVEPTAHKEPEKLRSQIWVMLVAFFMTFFTLFSSTMNR
                     VTKKLSDSPSEDAKSAEDFSFDASTKEEFRPPSPTPSIKEAELIKSVMQRLGELEEKV
                     DTLNTKPSKMPYEKEELLNAAVCRVDALEAELIATKKALHEALMRQEELLAYIDAQEE
                     KLFRVKKEIMLVKAEE"
     misc_feature    495..635
                     /gene="LOC139842809"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    693..1205
                     /gene="LOC139842809"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p); Region:
                     SEC14; smart00516"
                     /db_xref="CDD:214706"
ORIGIN      
        1 ctcaaacccc tttcatctct ctaatcgccc tccttgcatt tctcgatttt ttaattttaa
       61 ttttccctat tattcatttt ttaattttat tcttcttcgt attattcacc ggctgtttat
      121 atctattcaa ttcgatcgag ttgctaagct cttgtaattt taatttctcg atcaaaattg
      181 gaagataaat tgtagtgaat tttcgcaaat cgatgtctgg accactcgat cgatttgcaa
      241 ggccgtgctt tgaggggtca tcgggtaacg atgagagacc agagagaaga gagagatcag
      301 aaagaagaga aagaaagtct gattttgagt actcggagga tgaaaggagg acaagaattg
      361 gttcattgaa aaagaaagca ctaaatgcat ctagcaagtt taaacattct ctaaagaaga
      421 agggcagtag aagaaaaagt gatggacgag ttagctctgt ttctattgag gatattcgag
      481 atgttgagga gctacgggcg gttgatgcgt tccgacaggc gctcattttg gaagaattgc
      541 tgcctgaaaa acttgatgat tatcatatga tgttgaggtt tctgaaagca aggaagtttg
      601 atattgaaaa ggcaaagcaa atgtgggctg atatgattca ctggagaaag gagtttggtg
      661 ctgatacaat tattgaggat ttcgaatttc aagagttgaa tgaagttttg aagtattatc
      721 cccatggtaa tcatggagtg gataaagaag gaagacctgt gtacattgaa agattaggga
      781 aagtcgatcc aaacaaactc atgcaagtta caactatgga tcgatacata aagtatcatg
      841 tgcgggagtt tgaaaaaagt tttgctttta agtttcccgc ctgttcaatt gctgcaaaaa
      901 ggcacataga ttcgagcaca accattctgg atgttcaggg tgtgggactg aagaacttca
      961 gtaagagtgc tcgtgaactt gttacgaggc tacagaaaat tgacggtgac aattatcctg
     1021 aaacactcca tcaaatgtat ataatcaatg ctggtaccgg ttttagactg ctctggggta
     1081 ctgtaaagtc atttttagat cccaaaacgg tttcaaagat tcatgttttg agtaacaagt
     1141 atcaaaataa attacttgag ttaatcgatg ccagtgagtt gccggaattc ttaggtggca
     1201 catgtacttg tgcagataaa gggggttgtc ttctctctga taaagggcca tggaataatc
     1261 ctgaaatctt gaagttggct ctaaatagcg aagcccgacg agtcagacag gtggttaaag
     1321 ttttaaatag tgagggaaag attgttgcat atgctaagcc tcaacttcct ggggtaagaa
     1381 gcagtgacac ctctgctgag tcgggttctg atgctgacga tattgcatcc cccaaagcga
     1441 tgaggagtta ttcacatctt aggttgactc ctgttcgtga agaggccaag acatttggag
     1501 gtacaagcta cactggtcag ttttctgaat atgatgagta tgttcctatg gttgataagg
     1561 ctgttgattc tggatggaag aagcgacctc taactccaaa gcctaatgat ttcagaggga
     1621 cagttgtcga acctactgct cacaaggaac ctgaaaaact gcgttctcag atatgggtga
     1681 tgcttgtggc cttcttcatg acctttttca cgctctttag ttccaccatg aaccgtgtga
     1741 ccaagaaact ttccgactca ccatccgagg atgccaaaag cgctgaagat ttctcctttg
     1801 atgcatcaac taaggaggag tttcggcctc catcacctac tccatctatt aaagaggcag
     1861 aacttatcaa atcggtcatg caaagattag gtgaacttga agagaaggtc gatacactta
     1921 acacaaagcc atcaaagatg ccttatgaga aagaggaatt actaaatgct gctgtttgcc
     1981 gtgttgacgc tttagaagca gaacttattg ctaccaaaaa ggccctgcat gaagctttga
     2041 tgagacaaga ggaattgcta gcttatattg acgctcaaga ggagaagttg ttcagggtga
     2101 aaaaagaaat catgctggtg aaggctgaag agtga
//
LOCUS       XM_071832915            2664 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842810), mRNA.
ACCESSION   XM_071832915
VERSION     XM_071832915.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2664
                     /gene="LOC139842810"
                     /note="uncharacterized LOC139842810; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842810"
     CDS             1..2664
                     /gene="LOC139842810"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689016.1"
                     /db_xref="GeneID:139842810"
                     /translation="MAPIAIEMHLIPIAMEHATSSEFVLLIVVCGLVVKVSSYSCHYL
                     QFSFITYSFCFSARLCPSGSHWRVSAIRLSWGSPDVVRGGMAHAKAKLRDKMWNLDYG
                     PKQTKIFDEWLEDGESRKIVEEAWNQNVDGYRLDCVFRDKLKNVKFALKEWSKVTYGS
                     IDVEIEDLKKKSIDWELKAENRALTNDEIDMWLDCRKKWIDKEKIITNMAKQKSRAKW
                     IHDGDENSKYFHSMIKRRHSKRNIRGLNINGSWCEDPCEVKNAAFCHFKALFEKRSIN
                     KMKFGSLVNSVTNRTAAVNSFSNNSVRISPISATSICSNAADQNRTSPVTSELALLHQ
                     NQPCIIGNEQSAYLKGRFILDGALISNESIEYLKKNKRKSLIFKVDFEKAFDSLSWEF
                     FLDMMETMGFGVRWRKWIHARLKSASISVLVNGSPTNKFLIKRGVRQGDPLSPFLFLI
                     AAEGLNHLIKKACVENLFKGVEIGKDNIPLSHLQFADDTIFLGEWHRQNFCNLMKVLK
                     CFENVSGLKINFHKSILYGLGVTNYEEETMARRFGCKVGELPFTYLGLPVGMNMSSVQ
                     NWNPDIEKINSKLANWKARRSHMVEGKWFWRAKTEPNSFWVIILKRIYGTNGLLPPLV
                     LNETQGASSVWGNILRAGYMIEKLDIKFGTSFSRRIGNGVDTEFWNTPWLCDLPLKDK
                     LKQLFHLDNEQDCSVRDRVRWIEQRVATTWNWRHPLNGRASSEYEFLLHILNTYVKHD
                     IALDLWTWNMYLSGYFTTKKLASIIDEKLLSSRFNLEETLKNNLVSIKVSIFVWRVLK
                     RRIPVHAEFDKRGIDIDSVRCPLCDDDVETIEHTLIFCRHAMDIKLAYVQFENNYMQL
                     VAPDMMHWKGCNLRECEKKLALAFLSLDAQH"
     misc_feature    1009..1674
                     /gene="LOC139842810"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    order(1138..1155,1315..1320,1453..1455,1459..1464,
                     1660..1665)
                     /gene="LOC139842810"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(1138..1155,1315..1317,1459..1461)
                     /gene="LOC139842810"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    1318..1320
                     /gene="LOC139842810"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <2344..2517
                     /gene="LOC139842810"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcaccca tcgcaattga gatgcatctc atcccaattg cgatggagca tgcgaccagt
       61 tcagaatttg tactgttaat agtggtttgt ggattagtgg ttaaggtttc atcttattca
      121 tgtcattatc tacaattctc atttataaca tatagctttt gttttagtgc tcggctttgc
      181 ccatcaggga gtcattggcg cgtctccgcc attcggttat cttggggttc tcctgatgtt
      241 gttcgtggtg ggatggcaca tgcgaaggcg aaacttagag ataaaatgtg gaatctagat
      301 tatggtccaa aacagacaaa gatctttgat gaatggttgg aagacggaga atctagaaaa
      361 atagtggaag aagcttggaa tcaaaatgta gacggatata ggcttgattg tgtgtttcga
      421 gataaactca aaaatgttaa atttgcgtta aaagaatgga gtaaggtcac atatggtagt
      481 attgacgtgg aaattgaaga tcttaagaag aagtcaattg attgggaatt gaaagctgaa
      541 aaccgggctt taacaaatga tgaaatagat atgtggctcg attgtagaaa aaaatggatt
      601 gacaaagaga aaataataac caacatggct aaacaaaaat caagggccaa gtggattcat
      661 gacggggacg agaactccaa atattttcat tctatgatta aaagaagaca ttcaaaacga
      721 aatattaggg gtcttaatat aaatggaagt tggtgcgagg atccttgcga agttaaaaac
      781 gcagctttct gtcatttcaa agcgttattc gagaaaagaa gcataaacaa aatgaagttc
      841 ggttctcttg ttaattcagt tacaaacaga acagctgcag tcaattcttt cagcaataat
      901 tcggtcagaa tcagccccat ttcagccaca tccatctgct ccaatgctgc tgatcagaac
      961 cgaaccagcc ctgttacatc agaactagcc ttgttacatc agaaccagcc ctgtattatt
     1021 ggcaatgaac aaagtgcgta tttaaagggg aggtttattc tagatggggc ccttatttcg
     1081 aacgaatcaa ttgagtatct caagaaaaac aaaagaaaga gtctcatttt caaagtcgat
     1141 ttcgaaaagg ccttcgatag tttgagttgg gaattttttt tggatatgat ggagacgatg
     1201 gggtttgggg ttagatggag gaaatggatt cacgcacgtc tcaaatcggc ttcaatctct
     1261 gttcttgtta atggatcccc tactaacaag tttctcatca agagaggagt tagacaagga
     1321 gatccgcttt caccctttct ttttcttata gcggcggaag gtttaaatca ccttattaaa
     1381 aaggcgtgcg tagaaaacct tttcaagggg gttgaaattg gtaaagacaa cattccgctc
     1441 tctcatttac aatttgcgga cgacacgatt tttcttggtg aatggcatag acaaaacttt
     1501 tgcaacctta tgaaagtgtt aaaatgtttc gaaaatgtct cgggtctcaa aatcaacttc
     1561 cataaaagta tcctatacgg attgggggta acaaattatg aggaggaaac tatggctcgt
     1621 cgtttcgggt gtaaagtagg tgaacttcca tttacctacc taggacttcc cgtgggtatg
     1681 aatatgagta gtgtgcaaaa ttggaacccc gacatagaaa aaatcaactc gaagctcgcg
     1741 aattggaagg caagacgatc tcatatggtg gaagggaaat ggttttggag ggctaaaacc
     1801 gaaccaaatt cgttttgggt cattatttta aaaagaattt atggcactaa cgggctactc
     1861 cctcctttgg ttcttaacga gacacaaggg gcgagtagcg tttggggcaa tatcttacgg
     1921 gcaggttaca tgatcgagaa gttggacatc aagtttggta cttcattttc gagacgtata
     1981 ggcaatggtg tggataccga attttggaac accccatggc tttgtgatct tcctttaaaa
     2041 gacaagttga agcagttatt tcaccttgat aatgagcaag attgtagcgt tcgagataga
     2101 gttcgttgga tagagcaaag ggtagcaaca acatggaatt ggcgacatcc tcttaatggt
     2161 agagcatctt ccgaatacga gttcttacta catatattaa atacttatgt taaacatgac
     2221 atagctttgg atttgtggac atggaatatg tatttgagtg ggtatttcac aacaaaaaag
     2281 ttagcgagta tcatcgatga aaagcttctt agtagtaggt ttaatcttga agaaacactt
     2341 aaaaacaatt tagtgtcgat taaagtttcc atcttcgtat ggcgggttct aaaaagacga
     2401 atcccggttc atgccgaatt tgacaaaaga ggtattgaca ttgattctgt taggtgcccg
     2461 ttgtgtgatg atgatgtgga aaccattgaa catactctta ttttttgtcg gcatgcgatg
     2521 gatatcaagc ttgcatatgt acaattcgaa aataattaca tgcaactggt tgcaccagac
     2581 atgatgcatt ggaagggatg caatcttaga gaatgtgaaa aaaaacttgc attggcattt
     2641 ttatcacttg atgcccaaca ttaa
//
LOCUS       XM_071832916            1305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BEL1-like homeodomain
            protein 7 (LOC139842811), mRNA.
ACCESSION   XM_071832916
VERSION     XM_071832916.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1305
                     /gene="LOC139842811"
                     /note="BEL1-like homeodomain protein 7; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:139842811"
     CDS             1..1305
                     /gene="LOC139842811"
                     /codon_start=1
                     /product="BEL1-like homeodomain protein 7"
                     /protein_id="XP_071689017.1"
                     /db_xref="GeneID:139842811"
                     /translation="MKKPLQNLSSSESLIPAGNITMYTLQQPIVSNDIQNIGIHDSGV
                     VSQQDLLKDCRSYEMLLMDQMGSNIPPLGSQFQTDQYLNTDVNFVGKSTQDSECYSYE
                     FGNVISNSKYLKAAQQLLDEVVNVKKIRKQEYSKNESVNDSHEVFGESKQDSSVLSAA
                     EKQDLQNKKTKLSSMLTEVDKRYNQYYNQMDIIVSSFDVIVGCGASKAYTSLALKTIS
                     THFRCLRDAINSQIKVISRSLGEKDSNANKIVISRLKFVDQKLRQQKRAQQFGHERIW
                     RPQRGLPESCVSVLRAWLFEHFLHPYPKDSEKTMLARQTGLTKSQVSNWFINARVRLW
                     KPMVEEMYQEEYVDAEMDSNSSSEITPKKTILLNRAQDIKNQSATTISDLAHHTKMSS
                     SIVEDHDDALKTHIINEGVSLTLRLQHVETNSLHNLQWKTRK"
     misc_feature    316..684
                     /gene="LOC139842811"
                     /note="Associated with HOX; Region: POX; pfam07526"
                     /db_xref="CDD:429514"
     misc_feature    order(826..840,844..846,904..906,922..924,961..963,
                     967..972,979..984,988..996,1000..1005)
                     /gene="LOC139842811"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(832..834,841..843,970..972,979..984,991..993)
                     /gene="LOC139842811"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    880..996
                     /gene="LOC139842811"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      
        1 atgaaaaaac ctctgcagaa tttatcctct tcggaatcac tgattccagc tggaaatatc
       61 acaatgtata cgcttcaaca acctatcgtc tcaaacgaca ttcaaaatat tggaatccat
      121 gattccggtg ttgtgtcaca acaagattta ctaaaagatt gtagaagtta tgaaatgttg
      181 ttaatggatc aaatgggttc gaatataccc cctttgggaa gccaatttca aactgatcag
      241 tacttgaata ctgatgtcaa ttttgtgggc aaaagcaccc aagattcaga gtgctattca
      301 tatgaatttg ggaatgtgat ttcaaattct aagtatctaa aagcagctca acaactgctt
      361 gatgaagttg taaatgtcaa gaaaatacgg aaacaagaat attctaaaaa cgaatccgtg
      421 aatgattccc atgaagtctt tggggaatcg aaacaagatt ccagtgtact ctcagctgct
      481 gaaaaacagg atttacagaa caagaagacc aagctgtcgt ctatgttgac cgaagttgat
      541 aaaagataca atcaatatta caatcaaatg gatattattg tatcatcatt tgatgtaatt
      601 gttggatgtg gggcttcaaa ggcgtataca tcactcgctc tcaagaccat ttcaacccat
      661 tttcggtgtt tgagagatgc aattaacagc cagataaaag tgatatcaag aagccttggt
      721 gagaaggatt cgaatgcgaa caaaattgtg atatccaggt tgaaatttgt ggatcagaag
      781 cttagacaac agaaacgcgc tcagcaattt ggccatgaac gtatttggag acctcagaga
      841 gggcttcctg aaagctgtgt gtcggttcta cgtgcatggc tgtttgagca ttttcttcat
      901 ccatatccta aagattctga aaagaccatg ctagcccgac aaacaggctt gaccaaaagt
      961 caggtttcaa actggttcat aaacgcacga gttcgtctat ggaagccaat ggtggaagaa
     1021 atgtaccaag aagaatatgt agatgctgaa atggactcca attcatcatc agagatcaca
     1081 cccaaaaaga ctatattact taatcgagca caagatataa aaaaccagag cgcaacaaca
     1141 atatctgatc tagctcatca cacgaaaatg tcaagttcca ttgtcgaaga ccatgatgat
     1201 gctctgaaaa cacatatcat aaatgaaggg gtgtcactaa ccttaagact acaacacgtc
     1261 gagactaaca gtctgcacaa cttgcaatgg aaaaccagaa aatga
//
LOCUS       XM_071832917             930 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842812), mRNA.
ACCESSION   XM_071832917
VERSION     XM_071832917.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..930
                     /gene="LOC139842812"
                     /note="uncharacterized LOC139842812; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842812"
     CDS             1..930
                     /gene="LOC139842812"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689018.1"
                     /db_xref="GeneID:139842812"
                     /translation="MVDIYLHNLRYLHNLRISLHHRVSKRSLPHCHTLLWVHPSPESP
                     INEHLDDYISVELPDPRVDPTGYAVIVATMMHGPCGLSKPKAPCMDNFSCYKKFPKSY
                     NNKTFFDSDGRAHCRRRNTGVYTTRSDVKLDNRYVVPYHHLLCLTFHAHINIERCGST
                     MLIKYLFKYISKGTDRVAARISRRPVGGTDDHVNQNSEPVDEIQNFIDARFICPHEAA
                     WRILKFPIHHREATVQILAVHLENMQLVRFHEQQPLNSIIENSQNKKTTLTEWLAYNS
                     SYSDGHHLTYLDFPSEYVWYESKKTWKRRTHIN"
ORIGIN      
        1 atggtagata tttacctcca caacttgcgt tacctccaca acttacgaat ttctctacac
       61 catcgagttt caaagcgcag tttgccgcat tgtcatacgc ttttgtgggt tcacccgtca
      121 ccggagtctc caataaatga acacctggat gattacattt ctgtagagtt acctgatcct
      181 agggtcgacc cgactggata cgcggttatt gtagcgacta tgatgcatgg tccttgtggc
      241 ctttcaaaac ctaaggcacc atgtatggac aatttcagtt gctataaaaa attcccgaag
      301 tcatacaaca ataaaacttt ttttgattct gatggtcgcg ctcactgtcg caggcgcaac
      361 acgggtgttt acactacccg gtcggatgtc aagcttgata acagatacgt tgtcccttac
      421 caccatcttt tatgcttaac gtttcatgct cacataaaca ttgaacggtg cgggtcaaca
      481 atgctaatta agtacttatt taagtacatt tcaaaaggaa ctgaccgtgt cgctgcacgg
      541 atttccagaa gacctgttgg aggcacagac gaccacgtaa atcaaaattc ggagccggta
      601 gatgagattc aaaacttcat agacgcccgg ttcatctgtc ctcacgaagc cgcctggcgt
      661 attttgaaat tccctattca ccatcgcgaa gccacagttc agattctagc agtgcatcta
      721 gagaatatgc agctagtgag gtttcacgag caacaaccgc taaattctat tattgaaaac
      781 agccaaaata aaaaaaccac tctcaccgaa tggctggcct acaattcatc ctactctgac
      841 ggtcatcacc ttacatacct cgatttccca tccgagtacg tttggtatga gtccaaaaaa
      901 acatggaaac gaagaactca catcaattaa
//
LOCUS       XM_071832918            1095 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842813), mRNA.
ACCESSION   XM_071832918
VERSION     XM_071832918.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1095
                     /gene="LOC139842813"
                     /note="uncharacterized LOC139842813; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842813"
     CDS             1..1095
                     /gene="LOC139842813"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689019.1"
                     /db_xref="GeneID:139842813"
                     /translation="MEEKNYDRASLSSQRLELEQHLNSKQKEVCNLIIAASDSKQAEL
                     IFVYGHGGTGKTFLWKAIITALRAEGKIVLAVTSSGIASLLLPSDRTAHSRFKLPFDL
                     TDESVCNVKKNTQLEKLFQDTDLIVWDEAPMNDRRCFEALDRSLRDILNNNDKPFGGK
                     SFIIGGDFKQTLPAGVPDGDDPRDARWIHIPEKFSIPDDEDGLSKLISFIYPVESLQN
                     PTASELQQKAIVCPKNDVADSINNIIVEMVSGPVTTYSSYDTATPHGNGGGESEMLNP
                     AEYLNTLNYPGLPPHSLSVKAGVPAILLRNINVTGGLCNGTRMIIAQLLSKLIEVEII
                     TGTRVGQKVFLLRMSLNHNEPTLPFTLKRP"
     misc_feature    64..972
                     /gene="LOC139842813"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(151..171,385..387)
                     /gene="LOC139842813"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atggaggaaa aaaattatga tcgagcctcc ctttcaagtc agcgcctgga attagaacaa
       61 cacctgaatt caaaacagaa agaagtgtgc aacttgatca ttgctgcatc ggatagcaaa
      121 caggcggaac ttattttcgt ttatggtcac ggtggcacgg gcaaaacatt tctatggaag
      181 gcgattatca ccgcattaag agctgaaggg aaaattgtcc tagcagtcac ctcgtctggg
      241 atcgcttctt tacttttacc gtcggacagg actgcccact ctcggttcaa gttaccattc
      301 gatctaactg acgaatcagt gtgcaacgtg aagaagaaca ctcagctaga aaaattattc
      361 caggataccg atttaatagt gtgggacgaa gctccaatga atgacagacg gtgtttcgag
      421 gcccttgata ggagcctcag agatatcctg aacaacaacg ataaaccctt cggtggtaaa
      481 tctttcatca ttggcggtga tttcaaacaa acgctaccgg caggtgtacc tgatggtgat
      541 gacccacgag acgctcggtg gatacatatt ccagaaaagt tttctatccc cgacgatgaa
      601 gacggcttat caaagcttat atcctttatc tatcctgttg aatcattgca gaacccgact
      661 gcatcagaac ttcagcaaaa agccattgtt tgccccaaaa atgatgtagc agattccatt
      721 aacaacataa ttgtcgagat ggttagcggt ccagtaacaa cgtacagtag ttacgatact
      781 gctacacctc acggcaacgg cggtggtgaa tctgaaatgc taaatccagc cgaataccta
      841 aacacgctca actacccggg tttgccacca cattcattga gtgtgaaggc aggcgtccct
      901 gcaattctgt tgcgaaatat taacgttact ggcggtcttt gtaatgggac aagaatgata
      961 atcgcgcaac tactgtctaa attaattgaa gttgagataa tcaccggcac aagggtcggc
     1021 cagaaggttt tccttctaag aatgagcctc aaccataatg aaccaacact gccttttacc
     1081 ctaaaaaggc cgtaa
//
LOCUS       XM_071832919             885 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842814), mRNA.
ACCESSION   XM_071832919
VERSION     XM_071832919.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..885
                     /gene="LOC139842814"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139842814"
     CDS             1..885
                     /gene="LOC139842814"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071689020.1"
                     /db_xref="GeneID:139842814"
                     /translation="MKDLGNLSSFLGISVQRTSDGLFLNQTAYANDIISRAGMTLCQP
                     VSTPVDTMGKLSSNAGDKYKDPTYFRSLAGALQYLTFKGPDIAYAVQQVCLHMHDPRD
                     IHMLAIKRIIRYIKGTVHMGLHMTRSKKHELVSYTDSDWGGCPNTRGSTSGYCIFLGD
                     NLISWSSKRQPTISRSSAESEYRGVANVVAESCWLRNLLLELHMPLHKATLVLCDNVS
                     ATYLSDNPVQHQHTKHIELDIHFVREKVQKGEVKVLHVPTRFQLADIFTKGLPRVLFN
                     DFRSSICLRFTTAVTEGG"
     misc_feature    <1..147
                     /gene="LOC139842814"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    406..816
                     /gene="LOC139842814"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(412..423,526..534,541..543,643..645,721..723,
                     802..804)
                     /gene="LOC139842814"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaggatc tcggtaatct aagctcattc ttggggatct cagttcagcg aacatcagat
       61 ggcttattcc tcaatcaaac agcctacgca aatgacatca ttagtcgagc aggcatgact
      121 ttatgccaac ctgtttctac tcctgtagac acgatgggaa aattgagttc aaatgcaggc
      181 gacaagtaca aagatcctac atattttcga agtctggcag gggcgttaca atatttaact
      241 ttcaaaggtc ccgacattgc atacgcggtt caacaagttt gcttgcatat gcacgaccca
      301 cgagacattc acatgttagc cattaaacgc atcatcaggt atataaaggg aaccgttcat
      361 atggggttac acatgacacg ttcaaagaaa catgaactgg tatcttatac ggactcggat
      421 tggggtggtt gtccgaacac aagaggttcc acctcgggct attgtatatt cttaggggac
      481 aaccttattt cttggtcctc caaacgtcaa ccaaccatct ctcgttcaag tgctgaatca
      541 gaatatcgag gggtggctaa cgtagtggcc gaatcctgct ggttacgaaa cttgttactc
      601 gagttacata tgcctttaca taaagctact ctggttctgt gtgataatgt tagcgccact
      661 tacctctccg ataacccagt ccaacaccaa cacacaaaac acatcgaact cgacatacat
      721 tttgttcggg aaaaggtcca aaaaggcgaa gttaaggttt tacatgttcc aactagattc
      781 caacttgcgg atattttcac caaaggttta ccacgcgttc ttttcaacga ttttagatcc
      841 agtatttgcc ttcgctttac tacggctgtg actgagggag gataa
//
LOCUS       XM_071832920             735 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842816), mRNA.
ACCESSION   XM_071832920
VERSION     XM_071832920.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..735
                     /gene="LOC139842816"
                     /note="uncharacterized LOC139842816; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842816"
     CDS             1..735
                     /gene="LOC139842816"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689021.1"
                     /db_xref="GeneID:139842816"
                     /translation="MILSVNVRGFGVEGKFGWVKGLCCVERPDIAREVVGNSGGMLVI
                     WDSSRFTVNNAIGNSYFIAILGVWIGSGAESLIVNIYGPHNDKDKKEMWCCLDKLLSD
                     VDYPCVLCGDFNEVRIHSDCMNCRFNQGRAQRFNEVIDRNRLIDIPINGKNRRESNHC
                     PLVFRDKKIDFGPKPFKVFDEWLNRDGVDRIIVDAWNKNVRSARKDCVFRDKLKNVKG
                     ELRSWSKGEFGNIDVEIKNLRAEVDI"
ORIGIN      
        1 atgatactct cggttaatgt gcgtggattt ggtgtcgaag ggaaatttgg gtgggtcaaa
       61 ggtttatgct gtgtggaacg gcctgatatt gctagagaag ttgtcgggaa ctctggagga
      121 atgctggtaa tttgggattc ctctaggttt acggttaata atgcgattgg taacagttac
      181 ttcattgcaa tacttggggt ttggatcggg tcgggtgcag aatctctaat tgtcaatatc
      241 tatggacccc ataatgataa agataagaag gagatgtggt gctgtttaga taaacttcta
      301 agtgatgttg attatccttg cgtcttgtgt ggtgacttca atgaagtcag aatacattcg
      361 gattgtatga attgcagatt taatcaaggt cgcgctcaac ggtttaatga agtcattgac
      421 aggaatcgtt tgattgacat cccgattaac gggaaaaata gaagagaatc gaaccactgc
      481 cctctcgttt ttagggacaa gaaaattgac tttggtccga aacccttcaa ggtgtttgat
      541 gaatggttga atcgagatgg tgttgatagg ataattgttg atgcttggaa taaaaatgtt
      601 cgtagtgcta ggaaagattg cgtttttagg gataagctta aaaatgtcaa aggagaattg
      661 agatcctgga gtaaaggtga atttggcaat atcgatgttg agatcaaaaa cttaagggca
      721 gaagttgata tttag
//
LOCUS       XM_071832921             756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842817), mRNA.
ACCESSION   XM_071832921
VERSION     XM_071832921.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..756
                     /gene="LOC139842817"
                     /note="uncharacterized LOC139842817; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842817"
     CDS             1..756
                     /gene="LOC139842817"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689022.1"
                     /db_xref="GeneID:139842817"
                     /translation="MDRCSRDQNCGIIPTWDWVRSPNGRTLDELYNINELLSNFKFAD
                     GNRDKWACNLFENGGFTVYSLSKLIDEKVLSPNIGAKCTDQVDFLPKKVGLFVWRAKQ
                     NRIPVRVELDKRGIDLDSVRCPVCDNDLETVEHIFIHCQFAKDLWLRVFRWWNLSRLP
                     YENMGELFQGCVDSNHPELRSKLWKAIEWVCGYMIWRNRNLTVFQEKKGNSSMTLNEL
                     QIKAFEWISRRSQKLNISWSQWLLNPSLFDVYG"
     misc_feature    <265..438
                     /gene="LOC139842817"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggatagat gctcaaggga tcagaattgc ggtatcattc caacatggga ctgggtgaga
       61 agcccgaatg gcagaactct agatgaactt tataacatca atgagttgct aagtaacttc
      121 aaattcgctg acggcaatcg tgataaatgg gcatgtaact tgtttgagaa tggcggcttc
      181 acagtctatt cactatcaaa gctaatcgat gaaaaagtgc tcagcccaaa catcggggct
      241 aagtgtactg atcaagtcga ctttcttccc aaaaaagtcg gtttgtttgt gtggagggcg
      301 aagcaaaatc gaataccggt aagagtcgag ctagataaaa gggggataga tttggattcg
      361 gtgagatgtc ctgtttgcga caacgactta gaaacggtgg aacatatttt cattcattgc
      421 caattcgcaa aggatctctg gttacgggta tttaggtggt ggaacttatc gcggcttcct
      481 tacgagaata tgggtgagct ttttcaaggt tgtgtagact caaatcatcc cgaattaaga
      541 tcgaaattgt ggaaggctat cgaatgggtt tgcgggtata tgatttggcg gaatcggaac
      601 ctcacggttt tccaagagaa aaaagggaat agttcgatga ctctcaatga gttgcaaatc
      661 aaggcgtttg aatggatctc taggcgctcc cagaaattaa acattagttg gagccaatgg
      721 cttttaaatc caagtttgtt cgatgtttac ggttaa
//
LOCUS       XM_071832922            1656 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cyclin-A1-4-like
            (LOC139842818), mRNA.
ACCESSION   XM_071832922
VERSION     XM_071832922.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 49% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1656
                     /gene="LOC139842818"
                     /note="cyclin-A1-4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842818"
     CDS             1..1656
                     /gene="LOC139842818"
                     /codon_start=1
                     /product="cyclin-A1-4-like"
                     /protein_id="XP_071689023.1"
                     /db_xref="GeneID:139842818"
                     /translation="MSSAVAELNHLKIPLAKILHATNNFDDKNITGKGGFRNVFKGKI
                     VCDGKSIKIVARRLDRKQGAGDVEFWTEFLHVGGKNVDCHGHNTSLSVLSKLGLEIKL
                     LTAAQNAMKQTLQMESSALHSFKFEMKALTFIYFLTRFVHAAQGVNESYFNTLRDYTQ
                     YQPYDWYECVKALHALVKEYPNSTLPPIRQIYYSQHKMVPSRLDSKEAYLNSNLNGNG
                     TGSNVCIREILMETETGEKIVVNLDVDSFCAPLSATIDWQIYQNFRATEAKDRPKVDY
                     MEEVQEEIDPEKRARLVNFLAGVSDNLELLPHTLYLTINYVDRYLSAVSIDTQSFQLL
                     GVACLMIASKYEEIYPPEIDLFLELCPDDYKAEDIEKMLEKMQYLVLDTLDFDLYVVT
                     VEPFLRRFVLAAAQGVNEEEEVPLKCLAYYISEFSLLEYDMLCYPPSLVAASAIFLAR
                     YVVLFPSHKPWNSTLRDYTRYQPSDLYECVKALHALVTECPYPKLREIKDKYSCTYEC
                     VADKYSCPPSIPLEHFHNISTPQLSYLLIDRSNKEDLNNVVLD"
     misc_feature    <460..591
                     /gene="LOC139842818"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
     misc_feature    775..1164
                     /gene="LOC139842818"
                     /note="Cyclin, N-terminal domain; Region: Cyclin_N;
                     pfam00134"
                     /db_xref="CDD:459686"
     misc_feature    1174..1509
                     /gene="LOC139842818"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
ORIGIN      
        1 atgtcgtctg cggttgcgga gttaaatcac ttaaaaattc ctcttgcaaa aatactacat
       61 gctaccaaca actttgatga taaaaatata accggaaaag gtggtttcag aaacgttttc
      121 aaagggaaaa tagtgtgcga tgggaagtcc ataaaaattg ttgcccggag gttagatcgt
      181 aagcaagggg caggagacgt tgagttctgg acggagttcc ttcacgtcgg cggtaagaac
      241 gtcgactgcc atggccataa tacgtcactt tcggttctca gtaagttagg gcttgaaatt
      301 aaactcttga ccgctgcaca aaacgccatg aaacagacgt tgcaaatgga atcttcggct
      361 ctgcattcct tcaagtttga aatgaaggcc ctaacattta tatatttttt gacaagattt
      421 gttcatgctg ctcaaggtgt aaacgagtct tactttaata ctttaaggga ttatactcag
      481 taccaaccat atgattggta tgagtgtgta aaagctctgc atgcacttgt taaggaatac
      541 ccaaattcta ccttgccacc aatcagacaa atttattata gccaacataa gatggtacca
      601 agtaggctgg attcgaagga agcgtattta aattcaaatc ttaatggtaa tgggacgggt
      661 agtaatgtgt gcataagaga gatacttatg gagacggaga ctggtgaaaa gattgttgta
      721 aatctggatg ttgattcctt ctgtgcaccg ttgtctgcga ctattgattg gcaaatttat
      781 cagaatttta gagctactga ggcaaaggac aggcctaaag ttgattacat ggaggaggtg
      841 caggaagaga ttgatccgga aaagcgtgca cgtctagtta attttcttgc tggggtatct
      901 gataaccttg aactcctgcc tcatacattg tatttgacta tcaactacgt agaccgttac
      961 ctttctgccg tttcaataga tacacaaagt tttcaattgc ttggtgtggc ctgcctgatg
     1021 atagcttcga aatatgagga gatatatcca cccgaaattg atctcttcct cgaattgtgt
     1081 cccgacgact acaaagctga agacatagag aaaatgctag agaaaatgca atatttggtt
     1141 ctggatacct tggattttga tttgtatgtc gtaaccgttg aacctttttt gagaagattt
     1201 gttcttgctg ctgctcaagg tgtaaatgag gaggaggagg ttcctttaaa gtgtttggca
     1261 tactacatat ctgaattctc tcttttggag tatgatatgc tttgttatcc tccatctctt
     1321 gttgctgcat ctgctatttt cttagcaaga tatgtggtgc tttttccatc acacaaacct
     1381 tggaattcga ctctaaggga ttatactcgg taccaaccat cagatttgta cgagtgtgta
     1441 aaagctctcc atgcacttgt cactgaatgc ccatatccca aattgcgaga aatcaaagat
     1501 aagtacagct gtacatacga gtgcgtagca gacaagtatt cttgtcctcc atcgatacca
     1561 cttgagcatt ttcacaacat tagcacacct cagctcagct acttgttgat agatcgaagc
     1621 aacaaagaag atctcaacaa cgttgtcttg gattga
//
LOCUS       XM_071832923            1238 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides polyadenylate-binding
            protein-interacting protein 9-like (LOC139842819), mRNA.
ACCESSION   XM_071832923
VERSION     XM_071832923.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1238
                     /gene="LOC139842819"
                     /note="polyadenylate-binding protein-interacting protein
                     9-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 26 Proteins"
                     /db_xref="GeneID:139842819"
     CDS             1..990
                     /gene="LOC139842819"
                     /codon_start=1
                     /product="polyadenylate-binding protein-interacting
                     protein 9-like"
                     /protein_id="XP_071689024.1"
                     /db_xref="GeneID:139842819"
                     /translation="MAAGAETEVSVVKSVDNESVNFMTSNNDVNVNDNDVVESKKVCD
                     SDSKSEIQMQDFVNMLSNLKLNPLAKEFFPSSYSPIDRSQDQHELVLNYFVQPAYFNK
                     NPENGIEGYPNNRKRRNSYSHSRRLSNGKAFRAQREDNIKRTVYVSDIDHNITEEQLA
                     ALFSGYGHVLDCRVCGDPHSRLRFAFVEFGDENSARAALNLCGTLLGFSQITVLPSKT
                     AILPVNPTFLPRSEDEVEMCARTFYCTNIDKKVSQLEVKNFFETRCGEVSQLRLLGDN
                     IHSTRIAFVEFVMAESAIMALDCCGQQLGSQPIRVSPSKTPVRPRVARPFQPN"
     misc_feature    421..660
                     /gene="LOC139842819"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    706..951
                     /gene="LOC139842819"
                     /note="RNA recognition motif 2 (RRM2) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; Region:
                     RRM2_CID8_like; cd12460"
                     /db_xref="CDD:409893"
ORIGIN      
        1 atggctgctg gtgctgaaac tgaggtatcc gttgtcaaaa gtgtggataa cgagagtgtt
       61 aatttcatga cttccaataa tgatgtaaat gtcaatgata atgatgttgt tgagtccaaa
      121 aaagtgtgtg attctgattc aaaatcagaa atacaaatgc aagattttgt taatatgtta
      181 tcaaatttga aattgaatcc tttggctaag gaattttttc cgtcttctta ctcaccaatt
      241 gatcgcagtc aagatcagca tgagcttgtt ttaaattact ttgtgcaacc tgcttatttc
      301 aacaagaacc cggaaaatgg aattgaagga taccccaata acagaaagag acgaaatagc
      361 tatagccact ctcggcgact gtctaacgga aaggctttca gagctcaacg agaagacaac
      421 attaaaagaa ctgtttatgt ctcggacatc gatcacaata ttaccgaaga acaacttgct
      481 gcattattta gcggatatgg gcatgttctt gattgtcgag tttgtggcga tccacattca
      541 cgccttcgtt ttgcgttcgt ggaatttggt gacgagaact cagcaagggc tgcacttaat
      601 ctatgtggta ctctgcttgg cttttctcaa attaccgttt tgccctccaa aaccgccatc
      661 cttccggtga atccaacttt cctcccaagg tcggaggatg aagtcgagat gtgtgcaagg
      721 acattttact gtaccaatat cgacaaaaag gtttctcaac tcgaggtcaa gaatttcttt
      781 gaaacaagat gtggcgaggt ttctcaacta aggcttttgg gcgataatat tcattcgacc
      841 cgcattgcct ttgttgagtt tgtgatggca gagagtgcaa taatggctct tgattgctgt
      901 ggccagcagt taggatcgca accaataaga gtgagtcctt caaagactcc agtgaggcct
      961 cgggttgctc gcccatttca acctaactaa attcccaaac ttgaatcaga gattgttaag
     1021 agcgtaaaat atgcatccat tatgatttgg tgatattttt tttttttttt tttttttttt
     1081 tttttttttt ggagctataa cttcagtaag gtaatgaaat tgtgtagtcc gaagtcgata
     1141 aatagttgct tgtgtcgtgt ttcatgagct aaatgcttgt gatggtcacg gtggttacaa
     1201 gttgactttt ggttttgact tgaatggtta tattatgg
//
LOCUS       XM_071832924            1713 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 9-cis-epoxycarotenoid
            dioxygenase NCED1, chloroplastic-like (LOC139842821), mRNA.
ACCESSION   XM_071832924
VERSION     XM_071832924.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1713
                     /gene="LOC139842821"
                     /note="9-cis-epoxycarotenoid dioxygenase NCED1,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 38 Proteins"
                     /db_xref="GeneID:139842821"
     CDS             1..1713
                     /gene="LOC139842821"
                     /codon_start=1
                     /product="9-cis-epoxycarotenoid dioxygenase NCED1,
                     chloroplastic-like"
                     /protein_id="XP_071689025.1"
                     /db_xref="GeneID:139842821"
                     /translation="MASSLSTSSFSPSTTNIFHKPKFILPNKKTTTFCAVQLPSIANF
                     PKKQSESQFPSSWNLFQKISSIALDAVENGLIERERKNPLPKTADPKIQISGNFSPVP
                     DQPVRHSLPVTGTIPDHINGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKFDNGSASY
                     ACRFTETQRLVQERAIGKPVFPKAIGELHGHSGIAKLLLFYARGLCGLVDHSQGIGVA
                     NAGLVYFNNRLLAMSEDDLPYEVRVTPTGDLKTVGRYDFNGQLKSNMIAHPKLDPVSG
                     ELFSLSYDVIQKPYLKYLRFSPNGEKSKDVTINLGKPTMVHDFAITENFVVVPDHQVV
                     FNMSEMITGGSPVVYDKKKVSRFGVLDKYASDDSGIKWVEVPDCFCFHLWNAWEEPEH
                     DEVVVIGSCMTPADSIFNESDEELKSVLSEIRLNLKTGKSTRRAIISPEGNVNLEAGM
                     VNKNLLGRKSKYAYLAIAEPWPKVSGFAKVDLSTGETKKYIYGNKKYGGEPLFLPRDP
                     TSNAEDDGHILTFVHDEKTWKSELQIVNAITLQLEATVKLPSRVPYGFHGTFVSAKDL
                     ATQP"
     misc_feature    61..1707
                     /gene="LOC139842821"
                     /note="9-cis-epoxycarotenoid dioxygenase NCED; Region:
                     PLN02258"
                     /db_xref="CDD:215145"
ORIGIN      
        1 atggcgtctt cactttccac atcatcattt tctccttcta ctactaatat cttccataaa
       61 cccaaattca tattaccaaa taaaaaaaca accacttttt gtgctgttca gttgccttca
      121 atcgctaatt tccccaaaaa acaatctgag tcccaattcc catcatcgtg gaatttgttt
      181 caaaagatat cttctatagc attggatgca gtcgaaaacg ggctaatcga acgtgagcga
      241 aaaaacccgt taccgaaaac agctgatccg aaaattcaaa tatcgggtaa cttttcaccc
      301 gtacccgacc aacccgttcg acactcttta cctgttactg gaacaatccc ggatcatatt
      361 aacggagttt atttacgaaa tggggctaac ccgttattcg agccaacttc gggccatcat
      421 ttatttgacg gtgacggtat gatttacgcc gtgaaattcg ataacgggtc cgcgagttac
      481 gcttgccggt ttaccgagac gcagaggctc gttcaggagc gtgctatcgg taaaccggtt
      541 tttcctaaag ctattgggga acttcatggg cattcgggta tagcgaaatt gttattgttt
      601 tacgcacgcg ggttatgtgg attggtcgat catagtcaag gcattggggt cgcgaatgcg
      661 ggtttggttt attttaataa taggctttta gcgatgtccg aggatgattt gccttatgaa
      721 gtacgtgtta ccccgaccgg ggatttgaaa acggttgggc ggtacgactt taatgggcaa
      781 ttgaagtcta atatgatcgc gcacccgaaa cttgacccag tttcgggtga acttttttca
      841 ttaagttatg atgtcattca aaagccttac ttgaaatact taaggttttc gcctaatggt
      901 gagaaatcga aagatgtgac gataaatttg gggaaaccta ctatggttca cgatttcgcg
      961 attactgaga atttcgtggt ggtcccagat caccaggtgg ttttcaacat gtcggaaatg
     1021 ataactggtg ggtccccggt ggtgtacgat aaaaagaagg tgtcgcgttt tggtgttctt
     1081 gataagtatg cgagtgatga ttcgggcatt aagtgggtcg aggttccaga ttgtttttgt
     1141 tttcatcttt ggaacgcgtg ggaagaaccc gaacacgacg aggttgtcgt gatcgggtcc
     1201 tgtatgaccc ccgcggattc gatttttaac gagagtgacg aggagttaaa aagtgtatta
     1261 tctgaaattc gattaaattt gaaaacagga aaatcgaccc gccgagctat catttcgcct
     1321 gaaggcaatg ttaacctcga agctgggatg gtgaataaaa atcttctagg tcgtaaatcc
     1381 aaatacgctt acctagccat agccgagcca tggcctaagg tatcaggttt cgcaaaagtt
     1441 gatttatcaa cgggcgaaac aaagaagtat atttacggta acaaaaagta tgggggagaa
     1501 cctctgtttc tcccccgcga cccgacctca aatgctgaag acgatggtca cattttgaca
     1561 tttgtccacg acgaaaagac gtggaaatca gaactacaaa ttgttaacgc gatcacgtta
     1621 caattagagg caacagtgaa gctgccttca agggttccat atggttttca tggaacattt
     1681 gtaagtgcta aagatttagc aacacaacca tga
//
LOCUS       XM_071832925            1477 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842822), mRNA.
ACCESSION   XM_071832925
VERSION     XM_071832925.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1477
                     /gene="LOC139842822"
                     /note="uncharacterized LOC139842822; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 79
                     Proteins"
                     /db_xref="GeneID:139842822"
     CDS             47..1477
                     /gene="LOC139842822"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689026.1"
                     /db_xref="GeneID:139842822"
                     /translation="MAKQEVLLLDFWASMFGMRVRIALAEKGISYEYSEQDLRNKSQL
                     LLESNPVHKKIPVLIHNGKPICESRIIVEYIDEVWNDKAPLFPSDPYDKAAARFWADF
                     IDKKLYMIGRNLYLTKGEEHEASRQEYIDCLKLLEGELGDKPYFGGQCFGYLDISLVP
                     FCSWFEAYATYGKINFEQECPKLMNWFKRCVQNKESVSKTLPDGQKILEFVQLMRKKF
                     GVDDLYLHTASVYTSTTIHNHLHKHKTVVNMSNNTTPVPKQVILLDYWTSIYGMRVRI
                     ALAEKCIPYDYQEQDLRNKSQLLLDSNPIHKQIPVLIHNGKPICESSIIVEYIDEVWN
                     DKAPLFPSHPYDKARARFWANFIDKKLYQIGRNLCTLKGEEHEASRKEFMDCIKLFEK
                     ELGDKPYFGGESFGYLDVSLIPFYSWFQAYETYGKFDFDHECPKLIAWTKRCIQNKES
                     VSNTLPDLQKVFDFVQYLRKKFGVED"
     misc_feature    62..283
                     /gene="LOC139842822"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     Region: GST_N_Tau; cd03058"
                     /db_xref="CDD:239356"
     misc_feature    order(86..88,92..94,167..169,206..211,245..250)
                     /gene="LOC139842822"
                     /note="GSH binding site (G-site) [chemical binding]; other
                     site"
                     /db_xref="CDD:239356"
     misc_feature    order(101..103,122..124,263..265)
                     /gene="LOC139842822"
                     /note="C-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239356"
     misc_feature    order(233..238,245..247,263..265,275..277)
                     /gene="LOC139842822"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:239356"
     misc_feature    314..688
                     /gene="LOC139842822"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; Region: GST_C_Tau; cd03185"
                     /db_xref="CDD:198294"
     misc_feature    order(317..319,323..325,335..337,359..361)
                     /gene="LOC139842822"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:198294"
     misc_feature    order(335..337,356..358,512..517,524..526,647..649)
                     /gene="LOC139842822"
                     /note="N-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:198294"
     misc_feature    order(356..358,368..373,380..385,389..394,527..529,
                     536..538,665..667,674..676,686..688)
                     /gene="LOC139842822"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]; other site"
                     /db_xref="CDD:198294"
     misc_feature    824..1045
                     /gene="LOC139842822"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     Region: GST_N_Tau; cd03058"
                     /db_xref="CDD:239356"
     misc_feature    order(848..850,854..856,929..931,968..973,1007..1012)
                     /gene="LOC139842822"
                     /note="GSH binding site (G-site) [chemical binding]; other
                     site"
                     /db_xref="CDD:239356"
     misc_feature    order(863..865,884..886,1025..1027)
                     /gene="LOC139842822"
                     /note="C-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239356"
     misc_feature    order(995..1000,1007..1009,1025..1027,1037..1039)
                     /gene="LOC139842822"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:239356"
     misc_feature    1076..1450
                     /gene="LOC139842822"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; Region: GST_C_Tau; cd03185"
                     /db_xref="CDD:198294"
     misc_feature    order(1079..1081,1085..1087,1097..1099,1121..1123)
                     /gene="LOC139842822"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:198294"
     misc_feature    order(1097..1099,1118..1120,1274..1279,1286..1288,
                     1409..1411)
                     /gene="LOC139842822"
                     /note="N-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:198294"
     misc_feature    order(1118..1120,1130..1135,1142..1147,1151..1156,
                     1289..1291,1298..1300,1427..1429,1436..1438,1448..1450)
                     /gene="LOC139842822"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]; other site"
                     /db_xref="CDD:198294"
ORIGIN      
        1 tctttaaagc tccaccacca acaagaacaa acagaacaaa atagaaatgg caaaacaaga
       61 agtgcttcta cttgatttct gggcaagtat gtttggtatg agggtaagga ttgctcttgc
      121 tgaaaagggt atttcatatg aatacagtga acaagattta agaaacaaaa gccagcttct
      181 tttggaatcg aacccggttc acaaaaaaat accggttctc atccataacg gcaaacccat
      241 ctgtgaatct agaatcattg ttgagtatat tgatgaagtt tggaatgata aagctccatt
      301 gtttccttct gatccttacg ataaagctgc tgctaggttt tgggctgatt ttattgataa
      361 aaagctatac atgataggga ggaatttgta cttaacaaaa ggggaagaac acgaagcatc
      421 aaggcaggag tacatagatt gccttaaatt gcttgaagga gagcttggag acaaacctta
      481 ctttggaggt caatgtttcg ggtaccttga catatctttg gtcccatttt gttcatggtt
      541 cgaagcctat gcgacctatg ggaaaatcaa ctttgaacaa gagtgcccga aattaatgaa
      601 ctggttcaaa aggtgcgttc agaacaagga gagtgtgtct aaaactctcc cggatgggca
      661 aaagatctta gaatttgttc aacttatgag gaagaagttt ggagtcgatg atctatatct
      721 acacactgcc agcgtgtaca cctcaaccac catccataac cacctacaca aacacaaaac
      781 tgttgtgaat atgagcaaca acacaacacc agtaccaaaa caagtgattt tacttgatta
      841 ctggactagt atatatggta tgagggtcag aatagctctt gctgaaaagt gtattccata
      901 tgactaccaa gaacaagatt taagaaacaa aagccagctt cttttggact cgaacccgat
      961 ccataagcaa atcccagttc tcatccacaa tggcaagccc atctgtgagt ctagcattat
     1021 cgtcgaatat attgacgagg tttggaacga taaagctccg ttgtttcctt ctcatcctta
     1081 tgataaagct cgtgcaaggt tttgggctaa ctttatcgac aagaagctat accaaattgg
     1141 gagaaatttg tgcactctaa aaggggaaga acacgaagct tcccggaaag agtttatgga
     1201 ttgcattaaa ttgttcgaaa aagaacttgg agacaaaccc tactttggag gtgaaagttt
     1261 cgggtacctt gatgtatctt tgattccgtt ttattcgtgg tttcaagctt atgaaacata
     1321 tgggaaattc gactttgatc atgagtgccc gaaattaatt gcgtggacga aaagatgcat
     1381 tcagaacaag gagagcgtct ctaacactct tcctgattta caaaaagtct ttgactttgt
     1441 tcaatattta aggaagaaat ttggggttga agactag
//
LOCUS       XM_071832926            1868 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842823), mRNA.
ACCESSION   XM_071832926
VERSION     XM_071832926.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1868
                     /gene="LOC139842823"
                     /note="uncharacterized LOC139842823; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 73
                     Proteins"
                     /db_xref="GeneID:139842823"
     CDS             24..1868
                     /gene="LOC139842823"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689027.1"
                     /db_xref="GeneID:139842823"
                     /translation="MAKQEVLLLDFWASMFGMRVRIALAEKGIPYEYSEQDLSNKSKL
                     LLESNPVHKKIPVLIHNGKPICESNIIVEYIDEVWNDKAPLFPSDPYDKAIAKFWADF
                     IDKKLYMAGRKLYTTKGEEHAASRQEFIESLKLLEGELGVKPYFGGQSFGYLDVSLVP
                     FCSWFEAYATFGKINFEQECPKLISWFKRCLQNKESVSKTLPDGLKITEFLRKAYGID
                     ESPLVSFSLKKFQDALDSHKFRKRKGKRVLGSGDGLEGLDKGIWVSGSVRVDDSGLVK
                     GGPVVETVVDDLENGGDVRVKTGLMGLCLGLALGLGRLRGVGKGSSSGKAFSFFEEAV
                     KGLKGLVRVEGKLIGSKTLPKQNERRRSRAKNGKEVVGRKNNVDGSTNNKNKRNKIQM
                     AEQDVILLDFWASMFGMRVRIALAEKGIPYEYSEQDLSNKSQLLLESNPVHKKVPVLI
                     HNGKPICESSIIVEYIDEVWNDKAPLLPSDPCDKAAARFWADFIDNKKLNLIGKKLYT
                     TKGEEHEASRQEFIDCLKLLEGELGDKPYFGGQSFGYIDISLVPFCSWFEAYGTYGKI
                     NFEHECRKLMNWFRRCVQNKESVSKTLPDGLKILEFVQLMRKKYGIHE"
     misc_feature    39..260
                     /gene="LOC139842823"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     Region: GST_N_Tau; cd03058"
                     /db_xref="CDD:239356"
     misc_feature    order(63..65,69..71,144..146,183..188,222..227)
                     /gene="LOC139842823"
                     /note="GSH binding site (G-site) [chemical binding]; other
                     site"
                     /db_xref="CDD:239356"
     misc_feature    order(78..80,99..101,240..242)
                     /gene="LOC139842823"
                     /note="C-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239356"
     misc_feature    order(210..215,222..224,240..242,252..254)
                     /gene="LOC139842823"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:239356"
     misc_feature    291..662
                     /gene="LOC139842823"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; Region: GST_C_Tau; cd03185"
                     /db_xref="CDD:198294"
     misc_feature    order(294..296,300..302,312..314,336..338)
                     /gene="LOC139842823"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:198294"
     misc_feature    order(312..314,333..335,489..494,501..503,624..626)
                     /gene="LOC139842823"
                     /note="N-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:198294"
     misc_feature    order(333..335,345..350,357..362,366..371,504..506,
                     513..515,642..644,651..653)
                     /gene="LOC139842823"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]; other site"
                     /db_xref="CDD:198294"
     misc_feature    1212..1433
                     /gene="LOC139842823"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     Region: GST_N_Tau; cd03058"
                     /db_xref="CDD:239356"
     misc_feature    1215..1826
                     /gene="LOC139842823"
                     /note="Glutathione S-transferase [Posttranslational
                     modification, protein turnover, chaperones]; Region: GstA;
                     COG0625"
                     /db_xref="CDD:440390"
     misc_feature    order(1236..1238,1242..1244,1317..1319,1356..1361,
                     1395..1400)
                     /gene="LOC139842823"
                     /note="GSH binding site (G-site) [chemical binding]; other
                     site"
                     /db_xref="CDD:239356"
     misc_feature    order(1251..1253,1272..1274,1413..1415)
                     /gene="LOC139842823"
                     /note="C-terminal domain interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:239356"
     misc_feature    order(1383..1388,1395..1397,1413..1415,1425..1427)
                     /gene="LOC139842823"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:239356"
ORIGIN      
        1 aaaaaaaaca gaacaaaata gaaatggcaa aacaagaagt gcttctactt gatttctggg
       61 caagtatgtt tggtatgagg gtaaggattg ctcttgctga aaagggtatt ccatacgaat
      121 acagtgaaca agatttaagt aacaaaagca agcttctttt ggaatcgaac ccggttcaca
      181 aaaaaatacc ggttctcatc cataacggca aacctatctg tgaatctaac attattgttg
      241 agtacattga tgaagtttgg aatgataaag ctccgttgtt tccttctgat ccgtatgata
      301 aagctattgc taagttttgg gctgatttta ttgataaaaa gctttacatg gcagggagga
      361 aattgtacac aacaaaaggg gaagaacacg cagcatcaag gcaggagttc atagaaagcc
      421 ttaaattgct tgaaggagag cttggagtca aaccttactt tggaggtcaa agtttcgggt
      481 accttgacgt atctttggtc ccattttgtt catggtttga agcctatgcg acctttggga
      541 aaatcaactt tgaacaggag tgcccgaaat tgattagttg gttcaaaagg tgccttcaga
      601 acaaggagag tgtgtctaaa actctccctg atggtctaaa gatcacagaa tttttgagga
      661 aggcctatgg aattgatgaa tcacccttgg tttcattctc tttaaaaaag tttcaagatg
      721 ctcttgattc tcataaattc cgtaaacgca aaggcaaacg ggttttaggt tctggtgacg
      781 ggttggaggg gctcgacaag ggcatatggg tgagtggctc ggttcgtgtg gatgattcgg
      841 ggttagttaa gggtggtccg gtggttgaaa ctgtggttga tgatttggag aatggagggg
      901 acgttcgggt caagacgggg ttgatgggct tatgcttggg cctggccttg ggtttgggtc
      961 ggttgcgggg tgttggtaag ggtagctctt caggtaaagc gtttagtttt tttgaggagg
     1021 cggttaaggg acttaaaggt ttggtgaggg tggagggcaa attgatcggg tcgaagacgc
     1081 tcccgaaaca aaatgagcgt aggaggtcac gggcaaaaaa tggtaaagag gtggtgggtc
     1141 gtaagaataa tgttgatgga tccaccaaca acaagaacaa acggaacaaa atacaaatgg
     1201 cagaacaaga tgtgattcta cttgatttct gggcaagtat gtttggtatg agggtaagaa
     1261 ttgctcttgc tgaaaagggt attccatatg aatacagtga acaagattta agtaacaaaa
     1321 gccagcttct tttagaatca aacccggttc acaaaaaagt accggttctc atccataacg
     1381 gcaaacccat atgtgaatct agcatcattg ttgagtatat tgatgaagtt tggaatgata
     1441 aagcgccact gcttccttcc gatccttgcg ataaagctgc tgctaggttt tgggcggact
     1501 ttattgataa taaaaagcta aacttgatag ggaagaaatt gtacacaaca aaaggggaag
     1561 aacacgaagc atcaaggcag gagttcatag attgccttaa attgcttgaa ggagagcttg
     1621 gagacaaacc ttactttgga ggtcaaagtt ttgggtacat tgacatatct ttggtcccat
     1681 tttgttcgtg gttcgaagcc tatgggacct atgggaaaat caactttgaa cacgagtgcc
     1741 ggaaattgat gaattggttt agaaggtgcg ttcagaacaa ggagagtgtg tctaaaactc
     1801 tccctgacgg gctaaagatc ttagaatttg ttcaacttat gaggaagaag tacggaatcc
     1861 atgaataa
//
LOCUS       XM_071832928            2268 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842824), mRNA.
ACCESSION   XM_071832928
VERSION     XM_071832928.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2268
                     /gene="LOC139842824"
                     /note="uncharacterized LOC139842824; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842824"
     CDS             1..2268
                     /gene="LOC139842824"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689029.1"
                     /db_xref="GeneID:139842824"
                     /translation="MEALKKATRAGNGHGIRQPAVNIDFEVKGQILNMITHQCQIRGT
                     PKEDAFEHLQNFKSICNLFKVAQVEDTVIYLRVFPWSLKDDTKDWLESLPEGDIDSWT
                     TMKDKFLLRFFPASKAAQLQSDINHFTHKPHETLYDAWTWFGPHLTKDCNQASMEEQV
                     NYLGNQYNNQYQGGSSGYQRNGPPGFVNRNQNKSYVDKGPSLEELLQGFVIKTDESIT
                     ALRQDSESTKQQVRSQQASIQNLERDVGHIAQSLTEGPSGALPSNTQANPNVNGPPRT
                     ILTNNNRSDMKNKVPQVPTYSHVNAFSGDEGYDFDEVIPTYTHNGVDSWIRVSDITLA
                     YGNYLMSLMTGSSSSLGNQESKVKSVETTESPEFNVDEIKVEEEVKPSHKLKVYKPPI
                     PYPRAIQSEQPKDTFCKSINSNENIYVHVPLVDVLAGMPNYGKFLKDLMAKKGEHEQA
                     SSAFLEAECAAILEKSDMPPKLGDPGPFIVPCRIDDSEIFRCLTDSGESINLMPLSVY
                     SRLGLDELKSTNTGVRLINQSISKPIGIAENLVIKIGELEFPADFVVVDMPKDKVVPI
                     VLGRPFLATAGALTEWRTCNLILRDSGKTLSFQTKFSVKPTPTPIDSVNVLTSETDNV
                     KTKTSRKPKCRGGVIKEKPVVKLPDDSVVDRSMRRLFGRVKKAMNEKDEQLRLRLVSN
                     LSKKEKVKLRELTRESSAADDWLLSIFGDGSVENGGSHVLHNVMTIEEWPSVQSHLSL
                     RFAIILLYIRLCFSH"
     misc_feature    226..477
                     /gene="LOC139842824"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    1438..1722
                     /gene="LOC139842824"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1483..1485,1489..1491,1495..1497,1567..1575,
                     1699..1701)
                     /gene="LOC139842824"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1483..1491
                     /gene="LOC139842824"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1483..1485
                     /gene="LOC139842824"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1567..1578,1588..1599)
                     /gene="LOC139842824"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atggaagctt taaagaaagc cacaagggct ggtaatggac atggcattag acaaccggca
       61 gtcaacatag attttgaggt caaggggcag attcttaaca tgataactca tcaatgtcag
      121 atcaggggta caccgaaaga ggatgcattc gagcaccttc aaaattttaa gagtatttgt
      181 aatttgttca aggttgctca ggttgaagat actgttattt atttgagggt ttttccttgg
      241 tctttgaaag atgacaccaa ggactggtta gaatcattgc ctgaaggtga tattgatagt
      301 tggactacga tgaaagataa gtttctgctg cgtttctttc cagcttctaa ggctgctcaa
      361 ttgcaaagtg acattaatca cttcactcat aagccacatg agacacttta tgatgcatgg
      421 acatggtttg ggccacatct cacaaaggat tgtaatcagg catctatgga agagcaggtg
      481 aactacttgg gtaatcaata caataatcag taccaaggag gtagttcggg ttatcaaagg
      541 aacggaccac cggggttcgt taatcgaaat caaaataagt catatgtgga taagggtcct
      601 tcattagagg agttgttgca gggttttgta ataaagacgg atgaaagcat cacggcgttg
      661 aggcaagata gtgaatcaac aaaacagcaa gtgagaagtc aacaggcctc gattcagaat
      721 ttagaacggg atgtggggca tatagctcag tcgctcacgg agggaccatc gggtgctctc
      781 ccttcgaata cgcaagccaa tccgaatgtc aatgggccac cccgaacaat cttgactaat
      841 aataaccgaa gtgatatgaa aaataaagtg cctcaggttc ctacctattc gcatgttaat
      901 gctttttctg gtgatgaggg ttatgatttc gatgaggtta ttcctactta tactcataat
      961 ggtgtagaca gttggattcg agttagtgat ataactctcg cgtatggtaa ttacttgatg
     1021 agtttgatga cggggagttc ttctagtttg ggtaatcaag agtcgaaagt gaagagtgtt
     1081 gagactaccg agtctcctga gtttaatgtt gatgagatta aagtggaaga agaggtgaaa
     1141 ccttcacata agttgaaagt gtacaagccg cccattccat atccaagagc tattcagtcc
     1201 gagcaaccaa aggacacttt ttgtaagtct attaattcta atgaaaatat ttatgtgcat
     1261 gtacctttag ttgatgttct tgcaggtatg cccaattatg gaaaattttt gaaagattta
     1321 atggcaaaga agggtgagca tgagcaggca tcctccgcgt ttcttgaagc ggaatgtgct
     1381 gctattttgg aaaagagtga tatgccacca aagttaggtg atcccgggcc attcatagtg
     1441 ccctgtagga ttgatgactc tgaaattttt aggtgtttaa ctgattcagg tgagagtatc
     1501 aatcttatgc cattatctgt ttattcacgt ttgggtttag atgaacttaa gtcgactaat
     1561 actggagtta gattgattaa ccagtcaatt agtaaaccca tagggattgc tgaaaatttg
     1621 gtgattaaaa taggtgaatt agagttccca gcagactttg tggttgttga tatgccgaag
     1681 gataaagttg tacccattgt tttaggtaga ccatttttag caactgcagg tgcattaact
     1741 gaatggagga cttgtaactt gattttgaga gatagtggta aaactttaag ttttcagaca
     1801 aagtttagtg ttaaaccaac acctacaccc attgattctg tgaatgtgct aactagtgaa
     1861 actgataatg ttaaaactaa gactagtaga aagcctaagt gtaggggtgg agttattaaa
     1921 gaaaaacccg tggttaaact gcccgatgat agtgttgttg ataggtctat gcgaaggtta
     1981 ttcgggcggg ttaagaaagc gatgaatgag aaagatgagc agttaagact ccggttagtt
     2041 tctaatttat ctaaaaaaga aaaggtaaag ttgagggaac tgactaggga gtcaagtgcc
     2101 gcggatgatt ggttgttaag tatatttggt gatggtagtg ttgaaaatgg tggttcccat
     2161 gtactacata atgtgatgac aatcgaggaa tggccgtcag tgcagagcca tctgtcactt
     2221 cgtttcgcga ttatattgct ctacatccgg ttatgttttt ctcattaa
//
LOCUS       XM_071832929             594 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842825), mRNA.
ACCESSION   XM_071832929
VERSION     XM_071832929.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..594
                     /gene="LOC139842825"
                     /note="uncharacterized LOC139842825; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842825"
     CDS             1..594
                     /gene="LOC139842825"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689030.1"
                     /db_xref="GeneID:139842825"
                     /translation="MQFLEGEERSYLSSDSICQSERDSHFNSELYTTEYLNSINIGGL
                     PKHDLRLKVGVTVMLLRNIDQAGGLCNGTWLQIVELKDKVIKANFFTGTHVGTITAIQ
                     RMLMVPSDKRIPFRFQRRQYPISVCFAMTINKSQGQSLAHVGLFLPKPIFSHGQLYVA
                     LSRVTSKKGLKVLILNKDNQLSNTTTNVVFKEVLQHL"
     misc_feature    <1..240
                     /gene="LOC139842825"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <124..510
                     /gene="LOC139842825"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; Region: RecD; COG0507"
                     /db_xref="CDD:440273"
ORIGIN      
        1 atgcagtttc tcgaaggtga agaaagatca tatttaagct ccgacagcat ttgccaatct
       61 gaacgagact cacatttcaa tagtgagcta tacacaaccg agtatcttaa tagtattaac
      121 ataggtggtt taccaaagca tgatctacga ctgaaggtag gagtaacagt tatgcttctt
      181 aggaatatag atcaggccgg tggtttgtgc aatggtacat ggttgcaaat cgttgagctt
      241 aaagataaag ttataaaggc aaattttttt actggaacgc atgttggtac aattacagct
      301 attcagcgaa tgctaatggt tccttcagat aaacgaattc cattcagatt ccagagaaga
      361 caatacccta tctctgtttg ctttgcaatg actattaaca aaagtcaggg acaatcatta
      421 gcacatgttg gattatttct tccaaaacct attttcagtc acgggcaact gtatgtagct
      481 ttatctagag ttacttctaa gaaaggttta aaggttctca ttttgaacaa agacaaccaa
      541 ctttccaaca caactactaa tgtcgtgttc aaagaagtat tacaacatct atag
//
LOCUS       XM_071832930            3119 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides kinesin-like protein KIN-14Q
            (LOC139842826), mRNA.
ACCESSION   XM_071832930
VERSION     XM_071832930.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3119
                     /gene="LOC139842826"
                     /note="kinesin-like protein KIN-14Q; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842826"
     CDS             1..2964
                     /gene="LOC139842826"
                     /codon_start=1
                     /product="kinesin-like protein KIN-14Q"
                     /protein_id="XP_071689031.1"
                     /db_xref="GeneID:139842826"
                     /translation="MEDNRFDPLLITDVQRQQHQQKPPIRSHSPVVSFQTPVMADNDD
                     DMCYNKIEDVSLRNRCPEANRDNDCMDPIGNDVLDEISWKNSSSDDISTEHFIDENMN
                     KGNPKVGFTLTSPDLVLCPGSPDIPIRTYEDSPKLLKRSSLELSFENGITEGSNMNDC
                     NGTLVISNDERGSSEASFELVPLPPCQDDDVECDELMKVKRELELMKRENECKTKECE
                     EALESLRELQNELMRKSMHVGSLAFAVEGQVKEKSKWFSSLRDISRKLKIMKMDQIKL
                     LEEAEAYKKHTADMNDISCIIQSKIDEQVKQHEDLKIRFNEGAKERKELYNKIQELKG
                     NIRVFCRCRPLNSEEIAEGASMAFDFEASKDGELRVKSNVAFKKNFKFDSVFSPQATQ
                     VDVFEDTSAFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEENRGVNFRTLEELFHVID
                     ERKNQVRYEICVSVLEVYNEQIRDLLLPSSQPGVAAKRLEIRQVGEGLHHVPGLVEAQ
                     VSNMGEVWEVLKTGSNSRAVGSTNANEHSSRSHCMHCVMVKGENLVNGECTRSKLWLV
                     DLAGSERVVKTEVQGERLKETQNINRSLSALGDVISALATKSPHIPFRNSKLTHLLQD
                     SLGGDSKTLMLVQISPSENDLSESLCSLNFASRVRGIELGPAKKQIESSELLKYKQMT
                     EKYKQEMKNKDLQIKKMEDHVHGLDTKLKEKEFKNKTLQEKVKELESQLLVERKLARQ
                     HVDTKIAEQQMRQDEFSRPPLVSKPLNTQRIIEESKLNQSNVIQPPLVEKNGYKLPAP
                     HPPARDLVNLDDYTETEHEKEKENNPCLPERIMMPKRTGRASICTTTQRLPVRSVIPR
                     RNSLIPLPTSTAPVLTKFVPPLPSIESDGDNMGGSECCDMEVVVTDSPKRSNGGEKRL
                     LSALRRSIQKKNQMKSPMQLQQVRRVGGLNVAVERIRVSIGSRGRMAHRVIGNGRRMK
                     QQNCMDKERRWNIGK"
     misc_feature    <574..>1044
                     /gene="LOC139842826"
                     /note="DNA double-strand break repair ATPase Rad50;
                     Region: PRK03918"
                     /db_xref="CDD:235175"
     misc_feature    997..1989
                     /gene="LOC139842826"
                     /note="Kinesin motor domain, KIFC2/KIFC3/ncd-like
                     carboxy-terminal kinesins; Region: KISc_C_terminal;
                     cd01366"
                     /db_xref="CDD:276817"
     misc_feature    order(1027..1029,1252..1254,1261..1263,1267..1278,
                     1699..1701)
                     /gene="LOC139842826"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:276817"
     misc_feature    order(1840..1842,1849..1851,1858..1860)
                     /gene="LOC139842826"
                     /note="microtubule interaction site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276817"
ORIGIN      
        1 atggaagata accgttttga cccactttta atcactgatg tacaaagaca gcaacaccaa
       61 caaaaacccc caattcgatc tcactcacct gttgttagct ttcagactcc tgtaatggct
      121 gataatgatg atgatatgtg ttataacaag attgaagatg tttctttgcg aaatcgatgc
      181 ccggaagcaa atagggataa cgattgtatg gatccaattg ggaatgatgt tttagatgaa
      241 atttcctgga aaaattcaag ctcggatgac attagtactg aacacttcat tgatgaaaac
      301 atgaataaag gtaatccgaa ggttgggttt actttaactt cacctgattt agttttatgc
      361 cccggatcac ctgatatccc tatccggact tatgaagatt cgcccaaatt attaaaacgg
      421 tcttccctcg agctctcttt tgaaaacggt attactgagg gatccaatat gaacgattgc
      481 aatggcactc tagtaatttc aaacgatgaa cgtggtagtt ctgaggcttc atttgagctt
      541 gttccattgc caccttgtca agatgatgat gtagagtgcg acgagctaat gaaagtgaag
      601 agagaattgg agttgatgaa aagggaaaat gaatgcaaga ctaaagaatg tgaagaagct
      661 ttagagtctt taagagaact tcaaaacgag ttaatgagaa aatcgatgca tgttggatca
      721 ctagcttttg cagtcgaggg tcaagtgaag gaaaagagta aatggttttc atctctacga
      781 gacatttcaa gaaaactaaa gataatgaaa atggatcaga tcaagctatt ggaagaggct
      841 gaggcttaca agaaacatac tgctgatatg aatgacatta gttgcataat tcaatcaaaa
      901 attgatgaac aagttaaaca acatgaagat cttaagatca gattcaatga aggagcgaaa
      961 gaaaggaaag aactttacaa taagatccaa gagttaaaag gaaatattag ggtattctgt
     1021 cgatgtagac cattgaactc ggaagaaatt gcagaaggag cttcaatggc atttgatttt
     1081 gaagcttcaa aagatggaga gcttagagtt aaatcaaatg tagcatttaa gaaaaatttc
     1141 aaattcgatt ctgtttttag tccccaagca actcaagttg atgtttttga ggacacatcc
     1201 gcatttgcaa cctcggttct tgatggatac aacgtatgca tatttgcata cggacaaact
     1261 gggactggaa aaacatttac aatggagggc acggaagaaa accgaggagt taatttccgg
     1321 acgctcgaag agttgtttca cgtgatcgat gagcgtaaga accaagttcg gtatgaaata
     1381 tgtgtcagtg ttttggaagt ttacaatgaa caaatacgcg atttactcct tccaagttca
     1441 caaccaggag ttgctgcaaa aaggcttgaa ataagacaag ttggtgaagg gttgcaccat
     1501 gttccgggac tggttgaggc gcaagtgagc aacatgggtg aggtttggga ggttttgaaa
     1561 accgggagta attcaagagc agtggggtcc accaacgcta atgagcacag tagccgatct
     1621 cattgtatgc attgtgtgat ggttaaaggg gagaatttgg tgaatggaga atgcacaagg
     1681 agcaagttgt ggctcgttga tttagcggga agcgaaaggg ttgtgaaaac tgaagtacaa
     1741 ggagaacgac tcaaagaaac acaaaatatt aatcgatcgc tttccgcact tggagatgtt
     1801 atttcggctt tagcaactaa gagtccacat attcccttta gaaactcaaa gctcactcat
     1861 ttgcttcaag attctctagg tggagactcg aagacactaa tgttagtgca gattagtccc
     1921 agtgagaacg atttaagcga atcactttgt tctttaaact ttgcaagcag agttagagga
     1981 atagagttgg gtcctgcaaa gaaacaaatc gaaagctccg aattattgaa atacaaacaa
     2041 atgaccgaga agtacaagca agagatgaag aacaaagatc tacaaatcaa gaaaatggag
     2101 gatcatgttc atggtttaga cacgaaatta aaagaaaaag agttcaagaa caagactttg
     2161 caagaaaagg ttaaagagtt ggaatctcag cttttagtag agagaaaact cgcgcgtcaa
     2221 cacgttgaca caaagatcgc agaacaacaa atgcgacaag atgaattttc gagacctcca
     2281 ctcgtatcta aaccgttaaa cactcaaaga atcatcgaag aaagcaaact taaccaatcg
     2341 aacgttattc aaccgccgct tgttgagaag aacggttaca aactacccgc accacatcca
     2401 ccagcaagag acttggtcaa tcttgacgac tatacggaaa cagaacatga aaaggaaaag
     2461 gaaaacaacc cgtgtttacc ggagcggatc atgatgccga aacgaacggg tcgggcctcg
     2521 atttgcacga caacacagag gcttccagtg agatcggtta taccgagaag aaactcgttg
     2581 atcccgttac cgactagtac tgcaccagtt ttgaccaagt ttgttccacc gttgccgtcg
     2641 attgaaagtg atggtgataa tatgggcggg tcggagtgtt gtgatatgga ggttgtggta
     2701 acggatagtc ctaaaagaag caacggtggt gaaaagcgat tgttgagtgc gttgagacga
     2761 agtattcaga agaagaacca aatgaagtca cctatgcagt tacaacaggt acgaagagtg
     2821 ggtggtttga acgtagcggt tgaacggatt cgagtttcga ttgggagtcg agggcgtatg
     2881 gctcatagag tgattggtaa tgggagacga atgaagcaac aaaactgtat ggataaagaa
     2941 cgccgatgga atattggcaa gtgaggacta taaaatgcga agtgtgtagt attttatgct
     3001 aaaggtgttt cttgctttcg tccggtttaa catggtggtt aactgataac aggataagtt
     3061 attatactag tgattgatgt agattggttg catacattgt gaatgtgatt gaattggga
//
LOCUS       XM_071832931            1545 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842827), mRNA.
ACCESSION   XM_071832931
VERSION     XM_071832931.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1545
                     /gene="LOC139842827"
                     /note="uncharacterized LOC139842827; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842827"
     CDS             1..1545
                     /gene="LOC139842827"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689032.1"
                     /db_xref="GeneID:139842827"
                     /translation="MSLQFPLMFFFGKPGFHTDLKLIDTPGSTGGRVRKMTMNMFYCY
                     QLHDRLNSYSLMMRFGRLFQQYVVTVYCSIELDRMDYIRKKQKDIRKDYLPGLYDAIS
                     RGDQTGSDVGSRTILPASFTGGPRYMYSHYLDALPFPLLTASDCADIVARVFRFKVKQ
                     FVAFLKDGKPLGDFRGVLYTIEFQKRGLPHYHTLVWLYSSASSLISKRIDDYISAELP
                     DPRTDLAGYAVVSATMMHGPCGIPNLRAPFMEGPTCTKNFPKKYNEKTFFDADGRAHY
                     RRRNTGVYTTRSGVHLDNRYVVPYNKLLCMTFQAHINVECCGSTTLIKYLFKYISKGT
                     DRITARISKPVSSNSRARPQVSQPVDEVQNFIDARFICPHEASWRIFNFPIHHREPAL
                     QILSVHLENMQLLKFRGKYLAYLDFPSEFVWYQAQKSWKRRANINKCLIGRMAYIHPS
                     FGEAFFLRMLLCHQRGCTSFADIRTVNQVEYQTYRFACEAAGLLGDDKEWTIALEEAS
                     ASANAS"
     misc_feature    172..585
                     /gene="LOC139842827"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgtcgctac aattcccatt gatgttcttt tttggcaaac caggcttcca tactgattta
       61 aagttgattg acactccagg ttccactggt ggccgggtta gaaaaatgac gatgaatatg
      121 ttctattgct accagcttca tgataggcta aattcttaca gcctcatgat gaggttcggg
      181 cgactctttc agcagtacgt tgtcacggtg tattgcagta ttgaattaga tcggatggat
      241 tacattagga agaaacagaa agacatcagg aaagattacc tcccgggttt gtacgacgcc
      301 atcagcaggg gtgatcagac cggttcagat gtgggcagta gaactatcct cccagcttct
      361 ttcaccggcg gtccccgtta tatgtacagt cactatcttg atgccctacc ttttcctctg
      421 cttactgcat cagactgtgc tgatattgtc gcgagagttt ttcgcttcaa agtcaaacaa
      481 tttgttgctt ttttaaaaga cgggaaacca ctgggtgact ttagaggagt tctgtatacc
      541 attgagttcc agaaaagagg gttgcctcat tatcatacat tggtgtggtt gtattcctca
      601 gcctcatcac ttataagcaa aagaatagat gattacatat ctgctgaact tcctgaccca
      661 agaactgacc tcgctggtta cgcggtggtc tctgcgacta tgatgcatgg gccctgtggc
      721 attcccaact tacgtgcacc gttcatggaa gggcccactt gcacaaaaaa ttttccaaaa
      781 aaatacaacg agaaaacctt ctttgatgct gatggtcgtg cacactaccg aaggcgtaat
      841 actggtgtgt atacaacgcg gtccggggtc catctcgata acagatatgt agttccttac
      901 aacaaactac tttgtatgac tttccaagct catataaatg ttgagtgttg tggatcaaca
      961 accctgatca aatacctgtt caagtacatt tcaaagggta ccgaccgcat tactgctcgc
     1021 atatccaaac cagtcagtag taacagtcgt gcaaggccac aggtctctca accagtagat
     1081 gaagttcaga attttataga tgcccggttc atttgcccgc acgaggcttc ctggcgcatt
     1141 tttaacttcc cgattcatca tcgtgaaccg gcgcttcaaa tcctgtctgt ccatttagag
     1201 aatatgcagc ttttgaagtt ccgtggcaag tacctagcat atttggattt cccatctgaa
     1261 tttgtttggt atcaagcaca gaaaagctgg aaacgtaggg caaatattaa taagtgtttg
     1321 attggaagga tggcatacat acatccctca ttcggagagg cttttttcct aagaatgctt
     1381 ttgtgccatc aaagggggtg cacaagcttt gcagatatta gaaccgtgaa ccaagttgaa
     1441 taccagacat accgttttgc ttgcgaggcc gcaggccttc ttggtgatga taaagaatgg
     1501 actatagcac tggaggaagc atcggcatct gctaatgctt cttag
//
LOCUS       XM_071832932             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842828), mRNA.
ACCESSION   XM_071832932
VERSION     XM_071832932.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139842828"
                     /note="uncharacterized LOC139842828; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842828"
     CDS             1..861
                     /gene="LOC139842828"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689033.1"
                     /db_xref="GeneID:139842828"
                     /translation="MSNDIPLRAATSLKLPKLHINRDDLHNYILYEVEILLNQCGKTL
                     SDFALPSLPDDLLLDLVNRLIMEERNYDHESFNEELSHLESRMNVKQRRIYELIHDSF
                     SNNRTELLFVYGHGGTGKTFLWKAIITCLRAKGKIVLVVASYGIASLLLPSGITAHSR
                     FKLPIDLTDESMCNVNKNTQMAKLLESTDLIVWDEEFKVFVLTENMRLMQPGLTPSEK
                     ERNTAFSAWLLDIGNGEIGTRDLEDPINSSWIQIPDAYCVPDDDNGLANLISFIYPPE
                     TLQNPSAAEL"
     misc_feature    259..>822
                     /gene="LOC139842828"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(346..366,580..582)
                     /gene="LOC139842828"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgtctaacg acataccttt gcgagcagcg acctctctga agctgccgaa gctgcacata
       61 aacagagatg accttcataa ttatattctt tatgaggttg aaatcctcct aaaccagtgt
      121 gggaagacac tcagcgactt cgcattaccg tctctgccag atgaccttct actagatctt
      181 gtaaaccgtt tgatcatgga ggagagaaac tacgatcatg aatcgtttaa tgaggagctg
      241 agtcatctag aatctaggat gaatgtgaag cagagaagaa tctacgaact gatacatgat
      301 tctttctcga acaacaggac agagctgttg ttcgtttatg gtcatggtgg cactggtaag
      361 acatttttat ggaaggccat aatcacgtgt ctaagggcca agggaaagat tgttcttgtt
      421 gtggcatctt acggaatcgc atctttgtta ctgccttcgg gcataactgc tcactctcga
      481 ttcaaactcc ctattgacct taccgatgag tcgatgtgta acgtaaacaa aaacacacaa
      541 atggcgaaac tacttgaaag cacagatctt attgtgtggg atgaggaatt caaggtgttt
      601 gtccttactg aaaatatgcg cttaatgcag ccagggctga cgccctcgga aaaggagaga
      661 aacactgctt tctctgcctg gttattggat attgggaatg gcgagattgg tacacgggat
      721 ttggaagacc cgattaatag tagttggata caaattcctg acgcctactg tgttccagat
      781 gatgataatg ggttggccaa tctaatttcg tttatctacc ccccagaaac gttacagaat
      841 ccaagtgctg cagagttata a
//
LOCUS       XM_071832933             759 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842829), mRNA.
ACCESSION   XM_071832933
VERSION     XM_071832933.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..759
                     /gene="LOC139842829"
                     /note="uncharacterized LOC139842829; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842829"
     CDS             1..759
                     /gene="LOC139842829"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689034.1"
                     /db_xref="GeneID:139842829"
                     /translation="MVVDMVGGPVTIYASYDTATPQGNDGGESELLYPTEYLNTLNYP
                     GLPPHLLELKIGVPAILLRNISVAGGLCNGTRMIVTQLLTKAVEAEIITGIRFPLKVS
                     YAMTINKSQGQSLNKIGVYIPKPIFGHGQLYVSLSRATSLDGLRILIRQHEGQQANVT
                     KNIVMAQITALAQLAAGDRNRTIASYPMLVNMRYSDKEFLDELMNLNSVYMIGNFSCH
                     ATTRWEKVLSGPTTLSFDWNTTFELMPGALFSEH"
     misc_feature    <4..246
                     /gene="LOC139842829"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <304..426
                     /gene="LOC139842829"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    334..336
                     /gene="LOC139842829"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atggtggtcg atatggttgg tggtcctgtt acaatctacg caagttatga tactgctaca
       61 cctcaaggga atgacggtgg cgagtcggaa ctattatatc caacagaata cttgaacacg
      121 ctaaattacc ctggcctgcc accgcacctg ctcgaactaa aaataggggt gccagctatt
      181 ttgttgcgga atattagcgt cgcaggcggc ctctgtaatg gtaccaggat gattgtaact
      241 caactcctaa caaaagcagt tgaagcggag attatcacgg ggataaggtt cccgctgaaa
      301 gtttcgtatg caatgaccat aaataagagt cagggccagt cgctcaacaa aataggcgtt
      361 tatataccta aaccaatttt tggccacgga caactttatg tttcactctc acgggctaca
      421 tcactagacg gtttgagaat actgattaga cagcatgaag gccaacaggc aaacgtcacg
      481 aaaaatatcg ttatggcaca gattacagcg ttagcacaac ttgcagcagg cgatagaaat
      541 aggactatcg ctagctaccc tatgcttgtc aacatgcgct attctgacaa ggaatttttg
      601 gatgagctga tgaatttaaa ttcagtgtat atgataggga atttctcttg ccatgcaaca
      661 actaggtggg agaaggttct gtcagggcca acgacgctct cttttgattg gaatacaact
      721 tttgagctta tgcctggggc attgttttcg gagcactaa
//
LOCUS       XM_071832934            1974 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842830), mRNA.
ACCESSION   XM_071832934
VERSION     XM_071832934.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1974
                     /gene="LOC139842830"
                     /note="uncharacterized LOC139842830; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842830"
     CDS             1..1974
                     /gene="LOC139842830"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689035.1"
                     /db_xref="GeneID:139842830"
                     /translation="MTLLVKAFPFTLQGDAKAWMRSLPSDFIRSFQELTNEFINHFFP
                     PSKVERLRMEINGFTQRGDESLYDAWVRFKKLLRACLTKKEYINTFYRGCNTFMKQYL
                     DSSSGGVFIYKSPNAAEIMLEDISVNTYEWAPSPRDLTMKSVAQVESDNGQVMLASLN
                     NQFQTFGKELRKFQQTVVAMQVESTEAFLMKENDLLKQQIRNQQASFQNLESVIGRLS
                     NQVAKRPQGTLPSNTQVNPHNNRNNQQNHQNNARVIPIENNTTNLNPNQASSSNPNNT
                     YAQVNSIDSTEDEQQEYSQFLEDSDDATFIPYQVEIVMSMEATESCKELKGYFEQFKL
                     GYDEKELKVETLLNAKEQKNEVESTLSDNENIYVKLPLAEVLENMPNYGKFLKTLMAK
                     KGDVEQASTAFLKKEYDGILKKCNLPPKMGDPGPFLIPCNVNGSEMLTSLAESGARIN
                     FMPYSVYKRLDLGDLSPTTMGVKLIDQSINSSVGIAEDLIVKVGDMEIPIDFVIVDIK
                     EDPVVPLVLGRPFLATAGSFFDFRTEKLTLRDKGKCMSIRTKRVRAPSISLTPPQVVA
                     SVHHKRNASWFTNKRWWRIDQGNSRASSKKDEHLRKRLVSNLSKHEKVKLKELINETK
                     VTNDWLMSILSGGGNENVFLSSKRGDIYHPGIS"
     misc_feature    16..288
                     /gene="LOC139842830"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; pfam03732"
                     /db_xref="CDD:367628"
     misc_feature    1285..1569
                     /gene="LOC139842830"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(1330..1332,1336..1338,1342..1344,1414..1422,
                     1546..1548)
                     /gene="LOC139842830"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    1330..1338
                     /gene="LOC139842830"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    1330..1332
                     /gene="LOC139842830"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(1414..1425,1435..1446)
                     /gene="LOC139842830"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgacgcttt tagttaaggc attccccttc acacttcaag gagacgcaaa agcttggatg
       61 agaagtttgc cttccgattt cataaggtct tttcaagaat taacaaacga gtttattaat
      121 cacttcttcc caccttcaaa agttgaacga ttaagaatgg agattaatgg gttcacccaa
      181 cggggtgatg agagtttgta tgatgcatgg gtacgattca agaagctact aagagcttgt
      241 ttgacaaaga aggagtacat caatacattt tatcggggtt gtaatacttt tatgaagcaa
      301 tatcttgatt cttcatccgg tggggtattt atatacaaat caccaaatgc ggctgaaatt
      361 atgttagaag atatctcggt caacacatat gaatgggcac cttcaccgcg agatttaaca
      421 atgaaaagtg tagcacaagt cgagagtgat aatggacaag tgatgcttgc aagcttgaac
      481 aatcaatttc aaacatttgg gaaagagttg agaaaattcc aacaaacagt agttgcaatg
      541 caagtagaat caaccgaagc tttcctaatg aaagagaatg atctcttgaa gcaacaaatc
      601 cgaaaccaac aagcctcatt ccaaaacctt gagagtgtca ttggaagact ttcaaatcaa
      661 gttgccaaaa gaccacaagg aaccttacct tcaaacaccc aagttaaccc acacaacaac
      721 cgaaacaacc aacaaaacca ccaaaacaat gcgagagtta ttcctattga gaacaatacc
      781 accaacctga acccaaatca agcgagttca tcaaacccca acaatactta tgctcaagtg
      841 aactcgatcg attcaaccga agacgagcaa caagaatatt ctcaattttt ggaggattcg
      901 gacgatgcaa cattcattcc ttatcaagtt gagattgtaa tgtccatgga ggctaccgag
      961 tcgtgcaagg aattaaaggg ttattttgag caatttaaat tgggatatga tgaaaaagag
     1021 ttaaaggtgg aaactttatt gaatgcaaag gagcaaaaga acgaggtcga gtcaacttta
     1081 tccgataatg aaaatattta tgttaaactc ccattggcgg aggtgcttga gaatatgccc
     1141 aactatggga aatttttaaa gacactcatg gccaaaaagg gagatgttga gcaagcatca
     1201 accgctttct tgaagaagga gtatgatggt attttgaaga aatgtaacct cccaccaaaa
     1261 atgggtgatc ctggaccttt ccttatacca tgtaatgtga acgggtcgga gatgcttaca
     1321 tctttagctg aatcaggggc gcgtatcaac ttcatgccct actccgttta caaaaggtta
     1381 gacctaggag atctttcacc caccacaatg ggagttaaac taattgatca atcaattaac
     1441 tctagtgtgg ggattgccga ggatttaatc gttaaggtag gggacatgga gatccccatt
     1501 gactttgtta ttgttgatat aaaggaagat ccggttgtac cacttgtttt gggaagacca
     1561 ttcttagcaa ccgcgggttc tttctttgac tttagaaccg aaaaattgac tcttcgagac
     1621 aaagggaaat gcatgagcat acgaacaaaa cgtgttagag caccatcaat atcattgacc
     1681 ccaccacaag tagttgctag tgtgcatcac aagcgcaacg caagttggtt caccaacaaa
     1741 aggtggtgga ggattgacca agggaattcg agggcttcat ctaaaaagga tgaacacttg
     1801 agaaaacgcc tcgtgtcaaa cttgtcaaaa catgaaaaag tcaaacttaa agagttaatc
     1861 aatgaaacca aagtaacaaa tgattggtta atgtcaatat taagtggtgg cggtaatgaa
     1921 aatgttttcc ttagctcaaa gagaggggac atttaccacc ctggaattag ttga
//
LOCUS       XM_071832935             366 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SMALL AUXIN
            UP-REGULATED RNA 51-like (LOC139842834), mRNA.
ACCESSION   XM_071832935
VERSION     XM_071832935.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..366
                     /gene="LOC139842834"
                     /note="protein SMALL AUXIN UP-REGULATED RNA 51-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139842834"
     CDS             1..366
                     /gene="LOC139842834"
                     /codon_start=1
                     /product="protein SMALL AUXIN UP-REGULATED RNA 51-like"
                     /protein_id="XP_071689036.1"
                     /db_xref="GeneID:139842834"
                     /translation="MMQVKIVKAWLKKRPFNEFGNGVLAWLNCEKWCSWAFNKKSLYM
                     HEDDEEDNYIPRDVPKGHMVVYVGENQTRFVINVILLKNPLFNALLDQAQEEYDFTAD
                     SRRLWGDQSYSNQGCSKED"
     misc_feature    91..>306
                     /gene="LOC139842834"
                     /note="auxin-responsive family protein; Provisional;
                     Region: PLN03090; cl23790"
                     /db_xref="CDD:474056"
ORIGIN      
        1 atgatgcaag tgaagatagt aaaagcatgg cttaagaaaa ggccttttaa tgaatttggt
       61 aatggggttc tggcttggtt aaattgtgag aagtggtgtt catgggcatt caacaagaaa
      121 tcattataca tgcatgaaga tgatgaagaa gataattata ttccaagaga cgtaccaaaa
      181 ggtcatatgg tagtctatgt aggagaaaac caaacaaggt ttgtcatcaa tgtgatatta
      241 cttaaaaacc ctttgttcaa tgctttgttg gatcaagctc aagaagaata cgacttcact
      301 gctgattcta ggcggttatg gggtgatcaa agttatagta atcaagggtg ttcgaaggag
      361 gactga
//
LOCUS       XM_071832936            1683 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842835), mRNA.
ACCESSION   XM_071832936
VERSION     XM_071832936.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1683
                     /gene="LOC139842835"
                     /note="uncharacterized LOC139842835; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842835"
     CDS             1..1683
                     /gene="LOC139842835"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689037.1"
                     /db_xref="GeneID:139842835"
                     /translation="MESHLLMVGAITPRAPHVNTRLKLLSIETLTRSYFDHGLPFLDV
                     IATDDQGERIGLTVKNTHKKKYEELLKEQQIYVFKSIGTLKLSNHNSLNHWTHDCKLI
                     FTNKTTFVPVPPTQWSGSDGFKFIPFIDLITCQLSEKHTADVIGCVNYYDREPKYYGS
                     SNDEKSKYINLELKDLDGSIVSCTLFRTYMVKFLAYMKQLDSSQCVILVIQFGRTKKF
                     QHQLTVGTDWTHTRVFMDSDLPVIEDFRKRYLAVQNDNDSQSSFAPSFTPSLTPKGKP
                     LDEWFQNVLCVGCDDLSINHSTINTNTLFGGYIVVVNGTVFAAITWEGTFVVEAEIIA
                     IEPHEPWSYIACKKCHKTAPTTSKDVDLTLDIDQQLLLKRICRDCGEHPQVALRFKVS
                     VRVVDATGIATFTVFESLVKKYVTESAYEIKKALPEDEDQPVELEALVGNTLLCKLEI
                     TGNHKKYKQTNFTVKEYSTDEVFVDHFRQQFKIDRPKFKQMKLEAATADMSVSPKCGS
                     SNLSANEKHMVDLASSTGYTPPKKQIKEEPNESPLSVKSSTTRHKKFNLGDD"
     misc_feature    <124..327
                     /gene="LOC139842835"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    427..747
                     /gene="LOC139842835"
                     /note="A subgroup of uncharacterized, plant OB folds with
                     similarity to the third OB fold, the ssDNA-binding domain
                     (DBD)-B, of human RPA1 (also called RPA70). RPA1 is the
                     large subunit of Replication protein A (RPA). RPA is a
                     nuclear ssDNA-binding protein (SSB)...; Region:
                     RPA1_DBD_B_like; cd04481"
                     /db_xref="CDD:239927"
     misc_feature    order(427..429,616..618,622..624,628..630,691..693)
                     /gene="LOC139842835"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239927"
     misc_feature    order(442..444,451..456,508..519,523..525,544..552,
                     556..558,613..615,640..648,667..675)
                     /gene="LOC139842835"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239927"
     misc_feature    976..1392
                     /gene="LOC139842835"
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     Region: Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold.; cl09930"
                     /db_xref="CDD:471953"
     misc_feature    order(979..981,1327..1329,1333..1335,1339..1341)
                     /gene="LOC139842835"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239601"
     misc_feature    order(994..1002,1174..1185,1189..1191,1207..1215,
                     1219..1221,1324..1326,1345..1353,1381..1389)
                     /gene="LOC139842835"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239601"
ORIGIN      
        1 atggaatctc atttactcat ggtcggagca attactccta gagctcctca tgtcaacacc
       61 cgtttgaaat tgcttagcat tgaaacactt acaagatcct attttgacca cggtttacct
      121 ttcctcgatg tgattgcaac tgatgatcag ggagaaagaa ttggccttac tgtgaaaaat
      181 acgcataaga aaaaatatga ggaattattg aaagagcaac aaatctatgt ttttaaaagt
      241 attggtacat taaagctaag caaccataat agtctaaatc attggactca tgattgcaaa
      301 cttattttca caaacaagac cacatttgtg ccagttcctc ccactcaatg gtctggaagt
      361 gatggtttca agtttattcc atttattgat cttataacct gtcaattatc agagaaacac
      421 acggcagatg taattggttg tgtcaattac tatgatcgtg aaccaaaata ttatgggagt
      481 agcaatgatg aaaagtccaa gtacatcaac cttgagctca aggatttaga cggttcaata
      541 gtgtcttgca ccttatttag aacatatatg gttaagtttt tggcatacat gaaacaacta
      601 gactcaagtc aatgtgtgat tttggttatt caatttggtc gcacaaagaa attccaacac
      661 cagctaactg ttggtactga ctggactcac acaagagtgt ttatggacag tgacttaccg
      721 gtcatcgaag atttcaggaa gaggtatctt gcagtacaaa atgataatga ttctcagtct
      781 tccttcgcac cttcttttac accatcattg acacctaaag ggaaaccact ggatgaatgg
      841 tttcagaacg ttctttgtgt cgggtgtgat gacttgtcaa ttaatcattc tacaatcaac
      901 actaacactt tattcggtgg ttacattgtt gtagtcaatg gcactgtatt tgcagcaatc
      961 acttgggaag gtacatttgt tgttgaagca gagatcattg caattgaacc gcacgagccg
     1021 tggtcataca ttgcatgtaa aaaatgtcat aagacagcac caacaacttc aaaggacgtt
     1081 gatcttacgc ttgacattga ccaacagttg ttattgaagc gtatttgcag agattgcggt
     1141 gaacatccac aggttgctct taggttcaag gtaagcgtcc gtgttgtgga tgcaactggg
     1201 atagcaacat tcaccgtttt tgaatcactt gtcaagaaat atgttaccga atcagcttat
     1261 gagattaaga aagcgctacc ggaagacgaa gatcaacctg ttgaattaga agcattagtt
     1321 ggtaatactc tattgtgcaa gctggaaatt actggtaacc acaagaaata caagcagacg
     1381 aactttacag ttaaggagta ttcgactgat gaagtatttg tggatcactt ccgtcaacag
     1441 ttcaagattg acaggccgaa attcaaacaa atgaaacttg aagctgcaac tgctgacatg
     1501 tcagtttctc caaagtgtgg ttcttccaac ctttcggcta acgagaaaca catggtggat
     1561 cttgcaagca gcacaggata cactcctcca aaaaaacaga ttaaagaaga accaaatgaa
     1621 agcccattgt cggttaagtc atcaacaacc cgtcacaaga agtttaacct tggtgatgat
     1681 tag
//
LOCUS       XM_071832937             518 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides F-box protein SNE-like
            (LOC139842836), mRNA.
ACCESSION   XM_071832937
VERSION     XM_071832937.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..518
                     /gene="LOC139842836"
                     /note="F-box protein SNE-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842836"
     CDS             1..501
                     /gene="LOC139842836"
                     /codon_start=1
                     /product="F-box protein SNE-like"
                     /protein_id="XP_071689038.1"
                     /db_xref="GeneID:139842836"
                     /translation="MVQIQENIISNEFENDFCINDHVDLLIEILKRLDGRSLGAAACV
                     CKQWCSITRNDSLWEHLCFRHVSPAPVGVRPVVSALGGYRRLYMVCVRPVLSRLKRRR
                     VGNESEVVRRVWNQHEVELSLSLFCVEYYERLLVGGGVGGGGRVAGDSPAVTSSLKFL
                     CMPVNV"
     misc_feature    49..186
                     /gene="LOC139842836"
                     /note="F-box domain found in Arabidopsis thaliana F-box
                     protein GID2 and similar proteins; Region:
                     F-box_AtGID2-like; cd22151"
                     /db_xref="CDD:438922"
     misc_feature    order(55..57,73..75,82..87,94..99,109..111,115..120,
                     130..138,142..144)
                     /gene="LOC139842836"
                     /note="putative Skp1 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:438922"
ORIGIN      
        1 atggtgcaaa ttcaagaaaa tattattagt aacgagttcg aaaatgattt ttgtattaac
       61 gatcacgttg atttacttat cgaaatattg aaaaggctag atggtcgatc attgggtgcg
      121 gccgcgtgtg tatgcaaaca atggtgttcc ataacgcgta atgattcgtt atgggaacat
      181 ttatgttttc gacacgtgtc acctgccccg gtcggtgtac ggcccgttgt atctgcattg
      241 ggcgggtata gaaggttgta tatggtgtgt gtacggcctg tactgagtcg actcaaaagg
      301 agacgagttg ggaatgagtc tgaagttgta aggcgagttt ggaaccaaca tgaagttgaa
      361 ctttcgttgt cgttgttttg tgttgagtac tatgagaggt tgttggttgg tggcggtgtt
      421 ggtggtggtg ggagagttgc cggtgattca ccggcggtga cgtcgtcgct caagttttta
      481 tgcatgccgg taaatgttta gtatcgaggg taatggtg
//
LOCUS       XM_071832938             801 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ATP-dependent DNA helicase
            pfh1-like (LOC139842837), mRNA.
ACCESSION   XM_071832938
VERSION     XM_071832938.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..801
                     /gene="LOC139842837"
                     /note="ATP-dependent DNA helicase pfh1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:139842837"
     CDS             1..801
                     /gene="LOC139842837"
                     /codon_start=1
                     /product="ATP-dependent DNA helicase pfh1-like"
                     /protein_id="XP_071689039.1"
                     /db_xref="GeneID:139842837"
                     /translation="MYCDVADPVKLWRQTWKLMSDDIPLRAASSLHMSSITINSAELQ
                     GYILYELQILLNEHSKNVSDFGLPSIPQHLLDDLQNRLMMQEKNYDRDALTIERSILL
                     SKLNHKQKMVCDMVINANINRKQELIFVYGHGGTGKTFLWKALTTSLRAEGKIILAVA
                     SSGIVSLLLPSGQTAHSRFRIPLDLTNESVCNIKKKTQMASLLTKTKLIIWDEVPMND
                     RKCIETLDRTLRDIFNAPDVPFGGLSFILGGDFRQTLTVKKDAANSRF"
     misc_feature    313..>783
                     /gene="LOC139842837"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(400..420,634..636)
                     /gene="LOC139842837"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgtattgcg atgttgctga tccagtgaaa ctttggagac aaacatggaa attaatgtca
       61 gacgacatac ctcttcgtgc agcatcgtcg ttacatatgt caagtataac aataaattca
      121 gcagagttac aaggatatat actctatgag cttcaaatac tgctaaatga gcattctaaa
      181 aatgtttctg attttggctt accatcgatt ccacaacatt tgctagatga ccttcaaaac
      241 aggctcatga tgcaagagaa gaattatgat cgcgatgcat taacaattga aagatctata
      301 ttgttgagca aactgaacca taaacagaag atggtttgtg atatggttat caatgcgaat
      361 attaatcgaa aacaagaact aatattcgta tatggccatg gaggtacagg gaaaaccttt
      421 ctttggaaag cacttacaac atcgttaaga gctgaaggaa aaatcatttt agctgtagct
      481 tcttctggta ttgtatcact actattacca tcagggcaaa cagcgcattc gaggttcaga
      541 ataccgctag atttaactaa tgaaagtgtt tgtaatataa agaagaaaac tcaaatggca
      601 tcactcttga caaaaacgaa gctcattatt tgggatgagg taccaatgaa tgatcgcaaa
      661 tgcatagaaa cactcgatcg aacgttgaga gatattttca atgctccaga tgttcctttt
      721 ggaggtctca gcttcatttt aggtggtgat tttcgtcaaa ctttaacagt caaaaaagat
      781 gcagcaaatt cgagatttta g
//
LOCUS       XM_071832939             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842838), mRNA.
ACCESSION   XM_071832939
VERSION     XM_071832939.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139842838"
                     /note="uncharacterized LOC139842838; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842838"
     CDS             1..903
                     /gene="LOC139842838"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689040.1"
                     /db_xref="GeneID:139842838"
                     /translation="MRLLQPNLTHIEKENIKLYAEWLLQIGNGNIGDPDDSDPLNASW
                     IKIPDEFCINDDENGLSNIISFIYNDDLLRQPNAIQLQQQAIVCPRNETADIINEVII
                     LKIEREERTYTSFNFAIPYNNDGGQAELLYPAEYLNSQNFPSLPPHVLTLKVGVPIIL
                     LPNLNIAGGLCNGIRMITTQLLARHIEAEIITGTKIGQKVYLPRINLFHKDNVLPYIF
                     KRFQHTVKISYAMTISKNQGQSLNKIGIYLPKPVFSHGQLYVALSRATTPHGLKILIK
                     KDEKGNPNVTKNIVYKDFLKSILA"
     misc_feature    <1..543
                     /gene="LOC139842838"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    <682..813
                     /gene="LOC139842838"
                     /note="C-terminal helicase domain of RecD family
                     helicases; Region: SF1_C_RecD; cd18809"
                     /db_xref="CDD:350196"
     misc_feature    712..714
                     /gene="LOC139842838"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350196"
ORIGIN      
        1 atgcgattgt tacaaccaaa cctcacgcat atagagaaag aaaacattaa gttgtatgcg
       61 gagtggttac tacaaattgg aaatgggaac atcggcgatc cagacgattc tgatcctcta
      121 aatgcatcat ggatcaaaat accagacgaa ttctgcatca atgatgatga gaatggttta
      181 tcaaatatca tatcattcat atacaacgat gatctgttac ggcaaccaaa tgcaatacaa
      241 ttacaacaac aagctatcgt gtgtccacga aacgaaaccg ctgatattat taacgaagta
      301 atcattttaa agattgaaag agaagaaaga acttatacga gtttcaattt tgccattcct
      361 tataacaacg acggaggtca ggcagaattg ttatatcctg cagagtatct caactcacaa
      421 aattttccca gcctccctcc gcacgtgctc acactcaaag ttggcgttcc gataatatta
      481 ttaccaaatc tgaacatagc tggcggttta tgcaacggaa tacggatgat aacgacacaa
      541 ctgttagcga gacatattga agccgaaatc atcacaggaa ctaaaattgg gcagaaagtt
      601 tacctcccaa gaatcaattt atttcataaa gacaacgtgt taccctatat ttttaaaaga
      661 ttccaacata ccgtcaaaat atcttacgcg atgacgatta gcaaaaatca agggcaatcg
      721 ctcaacaaaa tcggaattta tcttccaaaa cccgttttta gtcacggtca attatacgtc
      781 gctctgtcaa gagcaacaac tccccatggt ttaaaaatcc tcataaaaaa agatgaaaaa
      841 ggaaacccta acgtcacaaa aaatatagtc tacaaagatt ttttgaaaag cattttagct
      901 tag
//
LOCUS       XM_071832940            1437 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842839), mRNA.
ACCESSION   XM_071832940
VERSION     XM_071832940.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1437
                     /gene="LOC139842839"
                     /note="uncharacterized LOC139842839; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842839"
     CDS             1..1437
                     /gene="LOC139842839"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689041.1"
                     /db_xref="GeneID:139842839"
                     /translation="MCFEKVSGLKINMNKSHLYGIGIPNQRIVEMANYLGCNMGSFPF
                     SYLGMPIGNNMSKKEAWNPVIEKFNKRLSDWKARTLSFGGRLPLLKSVLSSLPLYFFS
                     LFRAPSSVIILLENLRRKFFWGGTGNDTKLSWVKWDTILLPYREGGLNIGSLKSKNWA
                     LLGKWWWRFRTENDSLWVKVIKSIYGRDGGLGSLDSNIVPRRVSVWKKIISIGNDMSK
                     IGFDLQAHFVRNIGDGSGVLFWQDTWVGGCNLKSKFPRLFRLETNVLATVKDRMQVIN
                     NSRSFQWEWSREISGRLNGEQEQLILLLSSFSGIGSGTEGWCFSLNSSGIYTCKQVSG
                     LLDSLLLSDNTTGTKTLRNNCYHKKLCKTASDVWLGIHKWWNLNVSTSHGLEWIRASG
                     YGNMSSDKKRVWQAIVWTTCYIIWKNRNQKIFRNDSWAPPKLINEIQIKTFEWISNRS
                     RLIGKDWHRWLLNPSNLGDPRRNNLDTG"
     misc_feature    <7..153
                     /gene="LOC139842839"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtgcttcg aaaaggttag tgggctcaag attaatatga acaaaagtca tttgtatggt
       61 attggaatcc cgaaccaaag aatagtggag atggcaaatt atctcgggtg caacatggga
      121 tcatttccct tttcgtacct tggtatgcct attggtaaca atatgagtaa aaaagaggca
      181 tggaaccccg taattgagaa attcaacaaa agactatcgg attggaaggc gagaacattg
      241 tcgtttggtg ggagattacc tctcctaaaa tcggtactta gtagtcttcc cctttacttc
      301 ttctcgttgt ttcgagctcc gtcatccgtc atcatccttc tcgagaatct acgtcgtaag
      361 ttcttttggg gcgggacggg aaatgataca aaactttctt gggttaaatg ggacacaatc
      421 cttttaccat atagggaggg gggtttaaat atcgggtcac ttaaatccaa aaattgggca
      481 ttattgggga aatggtggtg gcgttttcga accgaaaacg attcactatg ggtcaaagtt
      541 atcaaaagca tttatgggag ggacgggggg ttgggatctc ttgattctaa cattgttcct
      601 agacgtgttt cagtttggaa gaaaatcatc tcaatcggca atgacatgtc caagattggt
      661 ttcgatttgc aagcacattt tgtcagaaat attggtgatg gaagtggagt actgttctgg
      721 caggatacat gggtgggcgg ctgcaattta aagtctaagt ttcctcgtct gtttcgattg
      781 gaaacgaatg ttctagccac ggttaaggac cgtatgcagg tgatcaacaa ctctcggtca
      841 tttcagtggg aatggtctag agagatcagc ggtcggctta atggagaaca agagcaactg
      901 attttgttac tatcctcatt ctcgggtatt ggttctggca cggaaggctg gtgtttttcc
      961 cttaacagtt caggcatata cacgtgcaaa caggtatcgg gcttgttaga cagcttattg
     1021 ttatcggata acaccacggg aactaaaact ttacgcaaca actgttacca caaaaaattg
     1081 tgcaaaacgg cttcggatgt ttggttaggg attcataaat ggtggaacct caatgtatct
     1141 acttcgcatg gcttagaatg gatcagggct tcgggttacg ggaatatgtc gagtgacaaa
     1201 aaacgtgttt ggcaagcaat cgtttggaca acttgctaca tcatttggaa aaataggaac
     1261 caaaagatat ttcgcaacga ttcatgggca cctccaaaac tcatcaacga gatacaaatc
     1321 aagacattcg agtggatttc aaatagatcg aggcttattg gcaaggattg gcatcgatgg
     1381 ctccttaatc cgtcaaacct tggcgatccg agaagaaata atttagatac aggctag
//
LOCUS       XM_071832941            1041 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842840), mRNA.
ACCESSION   XM_071832941
VERSION     XM_071832941.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1041
                     /gene="LOC139842840"
                     /note="uncharacterized LOC139842840; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842840"
     CDS             1..1041
                     /gene="LOC139842840"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689042.1"
                     /db_xref="GeneID:139842840"
                     /translation="MGEGEDFDVDIELDKLLKVVTDKEYIKEEIPGEDEPFEEITDGA
                     YIDSFGVSFSNSFVKELGDWKKTLFWDENWTGSGSLKDRFNRLYRLESNKQALISDRI
                     KRDGSNFIGNWCWSRTVSGRTGAELSALDRLIESCRLESDRPDRWVWNLSSNGSFTSK
                     TMTSIIEEKLLPRGTHLFETLRNYLVPKKVEVFIWRSRKKRLATLVELDKRGIDLHSV
                     RCPLCDDDVESVDHALIFCKHAFEVWRRVFDWWGVSMGSSLSIMEMFHAHSNITMSDI
                     GFKIWQAVIWTCGYLIWWNRNQMTFHKKCWSPPVALCEVQVKTFEWISKRCKKKDLVW
                     HEWLHNPQNLIL"
     misc_feature    <556..729
                     /gene="LOC139842840"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggtgaag gtgaagattt tgatgtcgat atagagttag acaagctgtt gaaggtagtc
       61 actgataaag aatacataaa agaagaaatt cccggggaag atgaaccttt tgaagaaatt
      121 accgatggtg catacatcga ttcatttggt gtttctttca gcaactcctt cgttaaagaa
      181 ctaggtgatt ggaagaagac cttattttgg gatgagaatt ggacgggttc tggttcactc
      241 aaagatcgtt tcaaccgttt atacaggcta gagtcaaaca aacaagcgct aatcagtgat
      301 agaatcaaac gggacgggtc aaacttcatc gggaattggt gctggtcaag aacagtttcg
      361 gggcgaacag gggctgagct ctcggctctt gacagactga tcgaaagctg caggctggaa
      421 tcggatcggc cggacagatg ggtatggaat ttatcgagta atggatcctt cacttctaaa
      481 acgatgacgt ctattattga agaaaagctg ctaccaagag gtactcattt atttgaaact
      541 ttgcgaaact atcttgttcc aaaaaaggtt gaggttttca tttggaggtc tagaaagaaa
      601 aggcttgcga cgttggtcga gttagacaag cggggtatcg atctccactc cgttcgttgc
      661 ccactttgtg acgacgatgt ggaatcggtt gatcacgctc ttatattttg taagcatgct
      721 ttcgaggtgt ggcgtagagt ttttgattgg tggggtgtta gcatggggtc atcgctaagc
      781 attatggaga tgttccatgc tcattcaaat atcacaatgt cggacatagg atttaaaatt
      841 tggcaagcgg ttatttggac ttgcgggtac cttatatggt ggaaccgaaa tcaaatgacc
      901 ttccacaaga aatgttggtc tcccccggtt gcgttatgtg aggtacaagt caaaacgttc
      961 gaatggatct cgaagaggtg taagaaaaag gacctcgttt ggcacgaatg gctgcataat
     1021 cctcaaaatt taatcttgta a
//
LOCUS       XM_071832942            1548 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fimbrin-5-like
            (LOC139842841), mRNA.
ACCESSION   XM_071832942
VERSION     XM_071832942.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1548
                     /gene="LOC139842841"
                     /note="fimbrin-5-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 52 Proteins"
                     /db_xref="GeneID:139842841"
     CDS             1..1548
                     /gene="LOC139842841"
                     /codon_start=1
                     /product="fimbrin-5-like"
                     /protein_id="XP_071689043.1"
                     /db_xref="GeneID:139842841"
                     /translation="MSTFEGVFVNDPWLQSQFTQVELRKLRPEFILARNESGTVTIQD
                     LPPVLAKLKPFNEVSSEDDVRNMLSDSYSNHAKHLDFEAFLRVYLNLKTRASAKMGTS
                     RTFRTTSSFVKSSTTTLRHSISESEKASYVSHINNFLGEDKFLKNYLPLDPATNALFD
                     LCKDGVLLCKLINVAVPGTIDERAINTKKVLNPWERNENHTVCLNSCKAIGCTVVNIG
                     TQDLAEGKPHLLLGLISQIVKIQLLADVDLKKTPELAEMVEDSKEAEELMGLAPEKVL
                     LKWMNYQLKKAGYKKEVTNFSSDLKDGEAYAHLLNVLAPEHETTKTLETKDPTERANL
                     VLEQAAKLDCKRYVTSKDIVEGSTNLNLAFVAQIFHKRNGLNIDKTKSSYAEMITDDE
                     STSRRERCFRMRISSLGVETHVDNVWEDVGNGWVLLEVFDKLAPRCDVWKQASKPPNK
                     TPFTKVEICNQVLRIWKNRAKYAWSFTLESQTTSNLLDKIAQGSLWVNDFWLDEKFRV
                     KERELKG"
     misc_feature    376..723
                     /gene="LOC139842841"
                     /note="first calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; Region:
                     CH_AtFIM_like_rpt1; cd21293"
                     /db_xref="CDD:409142"
     misc_feature    order(379..381,391..393,583..585,589..594,601..606,
                     610..612,637..663,676..678,682..687,691..696,703..708,
                     715..717)
                     /gene="LOC139842841"
                     /note="putative actin binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:409142"
     misc_feature    784..1110
                     /gene="LOC139842841"
                     /note="calponin homology (CH) domain superfamily; Region:
                     CH_SF; cl00030"
                     /db_xref="CDD:469584"
     misc_feature    order(826..828,979..981,985..990,997..1002,1006..1008,
                     1042..1056,1069..1071,1075..1080,1084..1089,1096..1101,
                     1108..1110)
                     /gene="LOC139842841"
                     /note="actin binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:409031"
     misc_feature    1180..>1401
                     /gene="LOC139842841"
                     /note="calponin homology (CH) domain superfamily; Region:
                     CH_SF; cl00030"
                     /db_xref="CDD:469584"
ORIGIN      
        1 atgtctacgt tcgagggtgt tttcgttaat gatccatggc ttcaaagcca attcactcaa
       61 gtggagcttc gtaaacttag acccgaattt attttagcaa gaaatgaatc ggggacagtc
      121 acaatacagg atttaccacc agttttggca aaattaaagc cgtttaatga ggtgtcaagc
      181 gaagatgacg tcagaaatat gctaagcgac tcttactcta accacgccaa acacttggat
      241 tttgaggcct ttcttcgggt atatctgaat ttgaaaactc gggcgagtgc aaaaatggga
      301 acttcaagaa catttagaac tacttcatct ttcgtaaaat catccacaac aacccttcga
      361 cacagcatta gtgagtcgga aaaggcttca tatgtttccc atattaacaa ctttcttgga
      421 gaagataagt ttttaaagaa ttatcttccg ttagaccctg caaccaatgc tttattcgat
      481 ctttgtaaag atggagtcct tttatgtaag ctcattaatg tagctgtccc tggtacaata
      541 gatgagcgag cgattaacac caaaaaggtc cttaatccat gggaacgaaa cgagaatcac
      601 actgtttgtc ttaattcttg caaggctatt ggctgcaccg tagttaatat tggcacacag
      661 gacttggcag aaggaaagcc tcacttatta cttggattaa tctctcagat agttaagata
      721 caacttcttg cagacgtcga tctaaagaaa actcctgagc tggcggaaat ggttgaagac
      781 agcaaggaag cagaagagct catgggtttg gcgccagaaa aagttcttct aaaatggatg
      841 aattatcaac tgaaaaaagc aggctacaaa aaagaagtta caaatttttc atccgactta
      901 aaggacggag aggcgtatgc acatttactc aatgttcttg cccctgaaca tgaaaccaca
      961 aaaacattgg agacaaaaga tccgacagaa agggccaatt tggttcttga gcaagcagca
     1021 aagttagact gtaaaagata tgttacgtca aaggacattg ttgagggttc tacaaattta
     1081 aatcttgcat tcgttgcaca aatatttcat aagaggaatg ggcttaatat agacaaaaca
     1141 aagtcttcat atgctgagat gattactgat gacgaaagca catcaagacg agaaagatgt
     1201 tttagaatga ggattagcag tcttggagtt gaaacgcacg ttgacaacgt gtgggaggat
     1261 gtaggaaacg gatgggttct tttggaagta tttgataaac ttgcaccgag gtgtgatgtg
     1321 tggaagcaag catcgaaacc tccaaataag acgcctttta caaaagttga gatttgtaac
     1381 caagttttaa ggatttggaa aaacagggcc aaatatgctt ggagttttac tttagaaagt
     1441 caaactacta gtaacctttt agacaaaatt gcacaggggt ccctgtgggt taatgatttt
     1501 tggttggacg aaaagtttag agtgaaagaa agagagttaa aaggataa
//
LOCUS       XM_071832943            2028 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides fimbrin-5-like
            (LOC139842842), mRNA.
ACCESSION   XM_071832943
VERSION     XM_071832943.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2028
                     /gene="LOC139842842"
                     /note="fimbrin-5-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 53 Proteins"
                     /db_xref="GeneID:139842842"
     CDS             1..2028
                     /gene="LOC139842842"
                     /codon_start=1
                     /product="fimbrin-5-like"
                     /protein_id="XP_071689044.1"
                     /db_xref="GeneID:139842842"
                     /translation="MSTFEGVFVSDPWLQSQFTQVELRRLRPKFISARNESGTVTIQD
                     LPPVLATLKPFNEVSSEDDVRNMLSDSYSNQAKELDFETFLRVYLNLQSRASAKMGTS
                     KTFRTTSSFVKSSTTTLRHSISESEKASYVSHINNFLGEDKFLKNYLPLDPATNALFD
                     LCKDGVLLCKLINVAVPGTIDERAINTKKVLNPWERNENHTLCLNSCKAIGCTVVNIG
                     TQDLAEGRPHLLLGLISQIVKIQLLADVDLKKTPELAEMVEDSKEAEELMGLAPEKVL
                     LKWMNYQLKKAGYKKEVTNFSSDLKDGEAYAHLLNVLAPEHVTTKTLETKDPTERANL
                     VLEQAAKLDCKRYVTSKDIVEGSTNLNLAFVAQIFHKRNGLTIDKTKSSFAEMMTDDE
                     STSREERCFRMWINSLGVETHVNNIWEDVRNGWVLLEVLDKLAPGSVVWKQASKPPIK
                     MPFRKVENCNQVVRIGKVLNFSLVNVAGDDIVAGNKKLIIAFLWQLMRFSMLQLLKNL
                     RTHGQGKEITDADILQWANNKVKLSGKSKQMDSFKDKHLSDGIFFLELLSAVEKRVVN
                     WGLVTKGETEEDKKLNASYIISVARKLGCSVFLLPEDIIEVNPKMILILTASIMYWSL
                     LQKAKGDEEDRPPEAEEGTAPEEEVNTAVNEVASEDGVTETKDETTENNDE"
     misc_feature    184..1860
                     /gene="LOC139842842"
                     /note="Ca2+-binding actin-bundling protein fimbrin/plastin
                     (EF-Hand superfamily) [Cytoskeleton]; Region: SAC6;
                     COG5069"
                     /db_xref="CDD:227401"
     misc_feature    376..723
                     /gene="LOC139842842"
                     /note="first calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; Region:
                     CH_AtFIM_like_rpt1; cd21293"
                     /db_xref="CDD:409142"
     misc_feature    order(379..381,391..393,583..585,589..594,601..606,
                     610..612,637..663,676..678,682..687,691..696,703..708,
                     715..717)
                     /gene="LOC139842842"
                     /note="putative actin binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:409142"
     misc_feature    1180..1518
                     /gene="LOC139842842"
                     /note="third calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; Region:
                     CH_AtFIM_like_rpt3; cd21299"
                     /db_xref="CDD:409148"
     misc_feature    order(1189..1191,1201..1203,1360..1362,1366..1371,
                     1378..1383,1387..1389,1414..1440,1453..1455,1459..1464,
                     1468..1473,1480..1485,1492..1494)
                     /gene="LOC139842842"
                     /note="putative actin binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:409148"
ORIGIN      
        1 atgtctacgt tcgagggcgt tttcgtcagt gatccatggc ttcaaagcca attcactcaa
       61 gtggagcttc gtagactcag acccaaattt atttcagcaa gaaatgaatc cgggacagtc
      121 acaatacagg atttgccacc agttttggca acattgaagc cctttaatga ggtgtcaagc
      181 gaagatgacg ttagaaatat gttaagcgac tcgtactcta accaggccaa agagttggat
      241 tttgagacct ttcttcgcgt atatttgaat ttacaatctc gagcaagtgc aaaaatggga
      301 acttcaaaaa catttagaac aacttcatct tttgtcaaat catctacaac gacccttcga
      361 cacagcatta gtgagtcgga aaaagcttca tacgtatccc acattaacaa ctttcttgga
      421 gaagataagt ttttaaagaa ttatcttcca ttagaccctg caaccaatgc tttattcgat
      481 ctttgtaaag atggagttct tttatgtaag ctgattaatg tagctgtacc tggtacgata
      541 gatgagcgag cgattaacac gaaaaaagtc cttaatccat gggaacgaaa tgagaatcac
      601 acgctttgtc ttaattcgtg caaggctatt ggctgcaccg tagttaacat tggcacacag
      661 gacttggcag aaggaaggcc ccacttatta cttggattaa tctctcagat agttaagata
      721 caacttcttg cagatgtaga tctaaagaaa actcctgaac tggcggaaat ggttgaagac
      781 agcaaggaag ccgaagagct aatgggtttg gcaccagaaa aagttctact aaaatggatg
      841 aattatcagc tgaaaaaagc aggctacaaa aaagaagtta caaacttttc gtccgactta
      901 aaggatggag aggcatatgc acatttactc aatgttcttg cccctgaaca cgtaaccaca
      961 aaaactttgg agacaaaaga tccgacagaa agggccaact tggttcttga gcaagcagca
     1021 aaattggact gcaaaagata tgttacatca aaggacattg ttgagggatc tacaaactta
     1081 aatcttgcgt tcgttgcaca aatatttcat aaaaggaatg ggcttactat cgacaaaaca
     1141 aagtcttcat ttgctgagat gatgactgac gacgaaagca cgtcaaggga agaaagatgt
     1201 tttagaatgt ggatcaacag tcttggagtt gaaacacatg ttaacaatat atgggaggat
     1261 gtcagaaacg gttgggttct tttggaagtg cttgataaac ttgccccggg ttctgttgtg
     1321 tggaagcaag catcaaaacc tccgattaag atgcctttca ggaaagttga gaattgtaac
     1381 caagttgtaa ggatcggaaa agttctaaac ttttctcttg ttaatgtggc tggagacgac
     1441 atcgttgcag gaaacaagaa gcttataata gctttcttgt ggcagttaat gagatttagc
     1501 atgcttcaac ttcttaaaaa cttaagaact catggtcaag gaaaggagat aacagatgcc
     1561 gatatcttac aatgggctaa caacaaagta aagctctcag gaaagtcaaa acaaatggac
     1621 agcttcaagg acaaacacct atcggatggt attttcttcc ttgagcttct tagtgcagtc
     1681 gaaaagaggg ttgtaaactg gggtcttgtt accaagggag aaactgagga agataagaag
     1741 ttgaatgcat cgtacataat tagcgttgca agaaagcttg ggtgctctgt tttcttattg
     1801 cctgaggaca ttattgaggt taacccaaag atgattctga tattaactgc aagcatcatg
     1861 tactggagct tgctacagaa ggctaaaggt gatgaagaag atagaccacc cgaggcggaa
     1921 gagggcactg cacctgagga agaagttaac acggctgtca acgaagttgc aagtgaagac
     1981 ggagttactg agacgaaaga tgagacaaca gaaaacaatg acgaataa
//
LOCUS       XM_071832944            1110 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
            (LOC139842843), mRNA.
ACCESSION   XM_071832944
VERSION     XM_071832944.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139842843"
                     /note="1-aminocyclopropane-1-carboxylate oxidase homolog
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 Proteins"
                     /db_xref="GeneID:139842843"
     CDS             1..1080
                     /gene="LOC139842843"
                     /codon_start=1
                     /product="1-aminocyclopropane-1-carboxylate oxidase
                     homolog 1-like"
                     /protein_id="XP_071689045.1"
                     /db_xref="GeneID:139842843"
                     /translation="MAFTGETLDRQRELKLFDETKGGVKGLVDSGITKVPHIFIQPPD
                     EFPLAKTSDHNNLPVINLQGFNSDPDRRKEIAKEIREASRTWGFFQVINHEIPVSILR
                     EMRDGALKFFNQDHEVKKEWYVTDSTKKIFYNSNVDLSSTLPVRWRDSFHCRMAPDPP
                     NPQELPPICRDILMEYSKQVTKLGCSLFELISEALGLNSSYLKDIGCADGLATICHYY
                     PPSPQPELTIGARKHADNDFLTVLLQDHIGGLQFLHQNQWVDVPFIPGALVVNIGDLL
                     QMISNDELISAEHRVVSTRVSPRVSVACFFTTGMVETGKIFEPIKEILSDENPAKYRA
                     TTMKEFVKHSHSNVFDKSSMLHFRI"
     misc_feature    70..1020
                     /gene="LOC139842843"
                     /note="leucoanthocyanidin dioxygenase like protein;
                     Region: PLN02393"
                     /db_xref="CDD:215220"
ORIGIN      
        1 atggccttca ccggagagac cttggaccgg caacgggaac tcaaattgtt cgatgaaaca
       61 aaaggaggag ttaaaggtct agtggactca gggatcacaa aagtaccaca tattttcatc
      121 caaccaccag atgaattccc actagccaaa actagtgatc ataacaattt acctgttata
      181 aacctccaag gattcaactc ggatcccgat cgacgaaaag agatagcgaa agaaataaga
      241 gaagcttcta gaacctgggg attctttcaa gtgatcaacc atgagattcc tgttagtatt
      301 ttgagagaaa tgagagatgg agcacttaag ttttttaatc aagatcatga ggtgaaaaaa
      361 gaatggtatg ttacggatag tacgaaaaag atcttttata atagtaatgt tgatctttcg
      421 agtactttgc ctgttcgttg gagggattcg tttcattgtc gaatggctcc tgatcctcct
      481 aatcctcaag aactgcctcc aatttgcagg gatatattga tggagtactc taaacaagtg
      541 actaaattgg gatgttcttt gttcgagttg atttctgagg ctcttgggct taattcaagt
      601 tacctcaaag atattggttg tgcggatggg ctggccacca tctgccatta ctatccgcca
      661 tctcctcagc ccgaactaac aatcggggcc cgaaaacacg ctgataatga cttcctaaca
      721 gtactcttac aagaccatat tggtggtctc caattccttc accagaatca atgggttgat
      781 gttccattta ttcctggagc tcttgttgtc aatattggag atcttttaca aatgatatcg
      841 aacgatgagt tgattagtgc agaacacagg gtggtgtcta cccgtgttag cccgagagta
      901 tcagtggcat gtttctttac tactggaatg gttgaaactg ggaagatttt cgaacccatt
      961 aaggagattc tgtcggatga gaatccggcc aagtaccggg ccaccacaat gaaggaattc
     1021 gttaaacatt cacattccaa tgtttttgat aaatcttcta tgttacattt caggatctaa
     1081 ggaaattcac agaatttgta tcatgtaacg
//
LOCUS       XM_071832945            1488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glucan
            endo-1,3-beta-glucosidase 3-like (LOC139842845), mRNA.
ACCESSION   XM_071832945
VERSION     XM_071832945.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1488
                     /gene="LOC139842845"
                     /note="glucan endo-1,3-beta-glucosidase 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins"
                     /db_xref="GeneID:139842845"
     CDS             1..1488
                     /gene="LOC139842845"
                     /codon_start=1
                     /product="glucan endo-1,3-beta-glucosidase 3-like"
                     /protein_id="XP_071689046.1"
                     /db_xref="GeneID:139842845"
                     /translation="MATHLLSCISQNLLSTAEIRYFVFCVHTCHHHTFIYIYTDGGSI
                     GVNYGRIASDLPSAFKVVKLLKSQGIDRVKVYDTDPSVLRSLSGTGIKVTVNLPNELL
                     YAAATKPSFSKVWIKRNVAAYYPHTQIESIAIGNEVFVDPKNTTAFLVPAIRNIHQAL
                     IKYKLDSVIKLSSPVALSALQNSYPSSAGSFRPELIEPVIKPLLEFLRETSSYLMVNA
                     YPFFAYESNSDVISLDYSLFRENPGVVDAGNGLRYFSLFDAQIDAVFAAMTALKYDDI
                     PLVVTETGWPSKGDDNEIGASIVNAAAYNGNLIKRILTGGGTPLRPKANLTVFLFALF
                     NENKKFGPVSERNYGLFYPNMEKVYNIPFTMDDLRNFGDESSPVTGGGEVRVLTPVKR
                     GANNSGESWCVAKDVDEKKLQSGLDYACGEGRADCRSIQPGATCHDPDTLLAHASYAF
                     NSYYQKMGRAAGACDFGGAAYVVTKPPSMCLNPYFFSYIFIFIVK"
     misc_feature    130..1089
                     /gene="LOC139842845"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     Region: Glycosyl hydrolases; cl23725"
                     /db_xref="CDD:474034"
     misc_feature    1198..1437
                     /gene="LOC139842845"
                     /note="Possibly involved in carbohydrate binding; Region:
                     X8; smart00768"
                     /db_xref="CDD:197867"
ORIGIN      
        1 atggcgacac acctcctctc ctgcatttcc caaaatttgt tatcaacggc tgaaattcga
       61 tattttgtat tttgtgttca tacatgtcat catcatacgt ttatttatat atatacagat
      121 ggaggttcaa tcggggtaaa ctacggtcga atagccagcg atctaccatc ggcattcaaa
      181 gtcgtaaagc ttctaaaatc acaaggtatc gatcgtgtca aagtatacga cactgatcct
      241 tccgtactcc gatcactatc cggcaccgga atcaaagtaa ccgtcaacct tccgaatgaa
      301 ctactctacg ccgccgccac aaaaccgtca ttctccaaag tctggatcaa acgcaatgtg
      361 gcagcatact atccacacac tcaaatcgaa tcaatcgcca tcggtaacga agtcttcgtc
      421 gatcctaaaa acacaacagc tttccttgtt cccgccataa gaaacattca tcaagcttta
      481 attaaataca aactcgattc tgttattaag ttatcgtcac cggttgcatt gagcgcgtta
      541 cagaactcgt atccctcatc tgccggttcg tttagaccgg aactgatcga acccgttatt
      601 aaaccgttac ttgagttttt acgtgaaacc agttcttatt taatggtcaa cgcgtatccc
      661 ttttttgctt atgagtcaaa ctctgacgtc atctcacttg attactcatt gttccgtgaa
      721 aaccctggcg ttgttgacgc cggtaacggt ttacgttact tcagtttatt cgatgctcag
      781 attgatgccg tgtttgcagc aatgacggcg ttaaagtacg acgatattcc gttagttgta
      841 acagaaacag gttggccgtc aaaaggtgac gataacgaaa ttggagctag tatagttaac
      901 gccgctgcgt ataacggaaa cttgattaaa cggattctca ccggcggtgg aacgccactc
      961 cggccaaaag caaatctaac ggtattcctt tttgctctgt ttaatgagaa caaaaaattc
     1021 gggccggttt cggagagaaa ctacgggttg ttttacccga atatggaaaa ggtttacaat
     1081 attccgttta cgatggatga tttgaggaat tttggagatg agagttcacc ggtgaccggc
     1141 ggtggtgaag ttagggtttt gactccggtc aaacgaggtg caaacaattc gggtgaaagt
     1201 tggtgcgtag caaaggatgt ggatgagaaa aagttgcaat cgggtttgga ttatgcgtgt
     1261 ggtgaaggac gggctgattg ccgttcgatt caacccggtg ccacgtgcca tgatcctgat
     1321 acgttactag cccatgcgtc atatgcgttc aatagctatt atcagaaaat gggacgcgcg
     1381 gctggcgcgt gtgattttgg cggggcagct tatgtggtga caaagccacc tagtatgtgt
     1441 ttgaatccct atttcttctc gtacattttt atttttatcg ttaaataa
//
LOCUS       XM_071832946             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842846), mRNA.
ACCESSION   XM_071832946
VERSION     XM_071832946.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139842846"
                     /note="uncharacterized LOC139842846; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842846"
     CDS             1..525
                     /gene="LOC139842846"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689047.1"
                     /db_xref="GeneID:139842846"
                     /translation="MPRRLYANVGHVSCMPVSKASRHPMIPVASPWPFCKWEIDIVGP
                     FPAGPGGVKFLVVTIDYFTKWVEAKTLKTISGKQIQNIIWENIVCQFGYQMKYLVYGS
                     EAELPAEINVPTMRIASFDESSNSEELRENLNLVEECREMAAIKEAINKQRIASYYNK
                     RVQPLSFQLDDLVW"
ORIGIN      
        1 atgccgcgga ggttatacgc aaatgtcggt catgtcagct gcatgccggt aagcaaagct
       61 tcgcgacacc caatgatacc agtcgcgtct ccatggccat tctgcaaatg ggaaattgat
      121 atagtgggac cattccctgc aggaccagga ggggtaaagt ttttggttgt gaccattgat
      181 tattttacaa agtgggtaga agccaaaacg ctcaaaacaa tttcaggcaa acaaatccaa
      241 aatattatat gggagaacat cgtctgtcag tttggatacc aaatgaaata tttggtgtat
      301 ggttccgagg ctgaactacc cgcagagata aatgtaccaa ccatgcgcat agcttccttc
      361 gatgaaagta gcaatagcga agaactgcgt gaaaatctaa atttggttga agagtgcagg
      421 gaaatggcgg cgataaaaga agcaatcaac aagcaaagaa tcgcaagcta ctataacaag
      481 cgcgtacaac cattatcttt tcaattagat gatttggtat ggtag
//
LOCUS       XM_071832947            1665 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842847), mRNA.
ACCESSION   XM_071832947
VERSION     XM_071832947.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1665
                     /gene="LOC139842847"
                     /note="uncharacterized LOC139842847; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842847"
     CDS             1..1665
                     /gene="LOC139842847"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689048.1"
                     /db_xref="GeneID:139842847"
                     /translation="MTGFMGFGSKWRSWIALCLKTAYISVLVNGSHTKEFKLGRGVRQ
                     GDPLSPFLFIIAAEGLNWLIKSALSNNAYSGVKVGNDNIPLTHLQYADDTLFFGTWSL
                     DNIENLMKLLKCFELCSGLKVNYNKSNLFGVGVDKKDVEYMANLFGCKVGTFPFTYLG
                     LPIGANMKKSGSWKPVIEKFEKRLSDWKACALLFGGRLTLMNSVLNNLPLYYFSLFRV
                     PPCVLKKLESVRRIFFWGWSALIGKWWWRFLTEPTSLWVSVIKSIYGASGSIIAGGLN
                     SRLNANSTWSVIAKKGFEIDAYGLEFSSSFKRVIGNGGNTRFWENVWLMDKPLKEVFK
                     RLVRFDVNVHATVSDRVNWDGSGVTSTWSWQREIYERTKDELDELEQLISAVVMVPEK
                     DDSWNWKLCGSGGCFVWRSRRGRLPVLVELDKRGVDLHSVLCPLCGEVVETVKHALFS
                     CKMVRVIWEKIWSWWGIAPPIVIFDGIQGAVSSLQCSGAGNKIWQGMVKVEDNTRITV
                     SGYDKSNIGQFAATIRKWRPPEPYKGKGVKYADEIIRKEGKAGKKK"
     misc_feature    <121..489
                     /gene="LOC139842847"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    133..135
                     /gene="LOC139842847"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
     misc_feature    <1216..1371
                     /gene="LOC139842847"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
     misc_feature    <1492..1656
                     /gene="LOC139842847"
                     /note="Ribosomal protein L6P/L9E [Translation, ribosomal
                     structure and biogenesis]; Region: RplF; COG0097"
                     /db_xref="CDD:439867"
ORIGIN      
        1 atgacggggt tcatgggatt tgggtcgaaa tggcggagtt ggattgcttt gtgtttgaaa
       61 acggcctata tctccgttct cgttaacggc tctcatacaa aagaattcaa gcttggtagg
      121 ggtgtgcgtc aaggagatcc tctctcgcct tttcttttca tcattgcggc ggaaggactt
      181 aattggttaa ttaaatcggc actctcgaac aatgcttata gtggggtgaa agttggtaat
      241 gataatatcc ctttgactca tcttcaatat gcggatgaca ctcttttttt tggtacgtgg
      301 agcttggata atattgaaaa tctcatgaag ctccttaaat gtttcgagct atgttccggt
      361 ttaaaggtga attataataa aagtaacctc tttggcgtgg gtgttgataa aaaagatgtg
      421 gagtatatgg ccaatctttt tggttgtaag gttggaactt tcccatttac atatctcggg
      481 ttacccattg gtgcaaacat gaaaaaatca ggtagttgga agccggtaat cgagaaattt
      541 gaaaaaagat tatcagattg gaaagcgtgt gcgttgttat tcggtggacg tttaaccctc
      601 atgaattcgg ttcttaataa cctaccattg tattactttt cgctctttcg tgtcccgcct
      661 tgcgtgctta aaaaacttga gagtgtgaga cgaatttttt tttggggctg gtcggcatta
      721 atcggcaagt ggtggtggag gttccttacc gaacccactt cattgtgggt tagtgttatt
      781 aaaagtattt atggggcttc gggttctatc attgcgggtg ggttaaattc tcgtttgaat
      841 gctaattcta cttggagcgt cattgcgaaa aaaggttttg aaattgatgc ttacggtttg
      901 gagttctcta gctcctttaa aagagtaatc ggcaatggtg gcaacactag attttgggag
      961 aacgtttggc tcatggataa acctctaaag gaagtgttca aaagattggt gcggtttgat
     1021 gttaatgttc atgctactgt ttcggatcgg gttaattggg acgggtcggg tgttacctca
     1081 acatggtcat ggcagcgtga gatttatgaa agaacaaagg acgagttaga tgagctggaa
     1141 caactaatct cggccgtggt catggtacct gaaaaggatg attcatggaa ttggaaacta
     1201 tgcggttcgg gtgggtgttt tgtgtggagg tcaagacggg gaagattgcc cgttttggtt
     1261 gaattagaca aacggggtgt cgatcttcac tccgtccttt gccctttatg cggtgaggtt
     1321 gtcgaaacgg ttaaacatgc gcttttctct tgcaaaatgg tccgggttat ttgggaaaag
     1381 atttggtctt ggtggggaat tgctccgcct attgtgatct tcgatggtat acaaggtgcg
     1441 gtctcatctt tgcaatgttc gggtgcgggt aataaaatat ggcaaggcat ggtcaaagtt
     1501 gaagacaaca ctcgaattac agtgagtgga tacgataagt caaacattgg tcaatttgca
     1561 gctaccataa ggaaatggag accaccagag ccatacaaag gtaagggagt caaatatgca
     1621 gatgagatca ttagaaagga gggcaaagca ggcaagaaga agtag
//
LOCUS       XM_071832948             465 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842848), mRNA.
ACCESSION   XM_071832948
VERSION     XM_071832948.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..465
                     /gene="LOC139842848"
                     /note="uncharacterized LOC139842848; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842848"
     CDS             1..465
                     /gene="LOC139842848"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689049.1"
                     /db_xref="GeneID:139842848"
                     /translation="MVLWAFRTTPKGSNRETPFSIVYGSEVVIPAEIVVPTQRITEFN
                     EEANMIQLRENMNLLEECRCMASIGEAANKQKIAKYYNLRERERSFRPGDYVWRNNNA
                     SRVEDLGKLGPNWEGPYVIVDALDNGAYYLKTRDGKFVSRTWHATNLKKFYV"
ORIGIN      
        1 atggttctgt gggcgttccg caccacacca aaaggaagca atcgcgaaac accttttagc
       61 attgtctacg gttcagaggt ggtcatcccg gcagaaatcg tagttcctac gcaacgcatc
      121 acggaattca atgaggaagc taatatgata cagttgaggg aaaacatgaa cttgttagag
      181 gagtgccgat gcatggcatc gataggcgaa gcggctaata agcagaaaat cgccaaatat
      241 tataacctgc gtgaacgcga acgttcgttc cgtcccggtg actatgtttg gcgcaataat
      301 aatgccagca gagttgaaga ccttggcaag ttgggaccta actgggaagg cccgtatgta
      361 attgtggatg ccctcgataa cggggcgtac tatttaaaaa cgcgtgatgg caagttcgtg
      421 tcacgtacat ggcatgcgac caatctcaag aaattctatg tttag
//
LOCUS       XM_071832949             690 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842850), mRNA.
ACCESSION   XM_071832949
VERSION     XM_071832949.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..690
                     /gene="LOC139842850"
                     /note="uncharacterized LOC139842850; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842850"
     CDS             1..690
                     /gene="LOC139842850"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689050.1"
                     /db_xref="GeneID:139842850"
                     /translation="MQKYLKLAEELANKFDSFSITQVPRSMNKKADALSKLSSLTFNH
                     FAKDVWVEVVDQKSTDVVQVAAPVEEVNTWMNPIVDYLKDGTLPADSVTAKKVRMKAP
                     MYVIRDGVLYKKSFLGPLLRCVGPQEAETIIREVEAKPLKSITGRQIVNFVWEEIVCC
                     FGLPHKIVSDNRKQFTHDTFRAWSDGLNIKQTFSSVAHPQANGQVEVTNRDIVSGIGG
                     RLNTDRKGWED"
     misc_feature    <1..111
                     /gene="LOC139842850"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    <481..636
                     /gene="LOC139842850"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgcaaaaat atctgaaatt ggcggaagag ctggccaaca aatttgactc tttttcaatc
       61 acgcaagtgc cgcgatcaat gaacaaaaag gctgacgccc tcagcaagct ttcttcgctg
      121 acgttcaacc acttcgctaa ggacgtatgg gtggaggtcg tcgaccaaaa atctaccgac
      181 gtggtacagg tggcggcacc agttgaggaa gtaaacactt ggatgaaccc aatcgtcgac
      241 tatctaaaag atggaacgtt acccgctgac agcgtaacgg ccaagaaagt ccgcatgaag
      301 gctcccatgt atgttatacg tgacggcgtg ctttacaaga agtcgttctt gggtccatta
      361 ttgcgttgtg tgggtccaca agaggctgaa actataataa gggaagtgga ggctaaacct
      421 ttgaaaagca tcacgggcag acagattgtg aattttgttt gggaagagat agtatgctgt
      481 ttcgggctac cacacaagat tgtcagtgac aacagaaagc aattcacaca cgatacgttt
      541 cgagcttggt ccgacgggct aaatatcaag caaacgttta gttccgtcgc tcaccctcaa
      601 gctaatggac aggttgaagt cactaacagg gacattgtat ccggcatcgg aggtaggttg
      661 aatacggata ggaaaggttg ggaagactag
//
LOCUS       XM_071832950             666 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842851), mRNA.
ACCESSION   XM_071832950
VERSION     XM_071832950.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..666
                     /gene="LOC139842851"
                     /note="uncharacterized LOC139842851; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842851"
     CDS             1..666
                     /gene="LOC139842851"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689051.1"
                     /db_xref="GeneID:139842851"
                     /translation="MTDITYLFTDVPKISRETLTVYLAAGAEVISSVLIAERDRTQMP
                     VYFVSKVLQHGEVNYNSVEKLVYALVHTARRLRRYFQAHHILVLTDTPIKQVLSKPEI
                     SGRMAKWAIELGEYEISYAPRNAIKGPPPAANETAPQTVTWEHYTDRASSSDGACAGL
                     ILRSLDGEEHPYTLRFAFSVSNNEAEYEVLLSGLRIAEKMGIKALKVAVDPQLVANTQ
                     PNS"
     misc_feature    <130..345
                     /gene="LOC139842851"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    427..>648
                     /gene="LOC139842851"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
     misc_feature    order(442..453,544..549,556..558,628..630)
                     /gene="LOC139842851"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgacagaca ttacatactt gtttactgac gttccaaaaa tttcaagaga aactttaacc
       61 gtttacttag cagcgggagc tgaagtgatc agctcggtat taattgcgga acgcgacaga
      121 acccaaatgc cggtatactt tgtcagcaag gttttgcagc atggcgaggt caattataat
      181 tcagtcgaga aactcgtcta tgcactagtt cataccgcaa ggaggttgag gcgatacttc
      241 caagcgcatc acattttggt actaacagat acgcctatca aacaggtttt aagcaagcca
      301 gaaatctccg gccggatggc aaagtgggca attgaactgg gagagtatga aattagctac
      361 gcgccgcgta acgccatcaa agggccacca ccagctgcca acgaaacggc acctcaaacc
      421 gtcacgtggg aacattacac tgacagagca tcgagttcag acggggcctg tgccggcctg
      481 atacttagaa gcctcgacgg cgaggaacac ccatacacct tacgtttcgc tttctctgtt
      541 tctaacaatg aagcagaata tgaagtgttg ctctccgggt tacgtattgc agaaaaaatg
      601 ggtatcaagg cactaaaggt ggcagtcgat ccacaacttg tggcaaatac acaacccaat
      661 tcataa
//
LOCUS       XM_071832953             855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides B-box zinc finger protein
            20-like (LOC139842852), mRNA.
ACCESSION   XM_071832953
VERSION     XM_071832953.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..855
                     /gene="LOC139842852"
                     /note="B-box zinc finger protein 20-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139842852"
     CDS             1..855
                     /gene="LOC139842852"
                     /codon_start=1
                     /product="B-box zinc finger protein 20-like"
                     /protein_id="XP_071689054.1"
                     /db_xref="GeneID:139842852"
                     /translation="MKIQCDMCEKMEASVYCTADEASLCHGCDRRVHHANKLASKHHR
                     FSLNNSSDQPPFCDICQEKRAFLFCKEDRAILCRQCDISIHVSNEHTKYHNRFLLAGV
                     KLSASSSCYDSSSDQALCSSNSIGSSEAESIKSSFAPGKQKAKAPKHSSSVNNHCDQF
                     NQQINVSMEPSSISDYLMETLPEWNVEELLDPSVSHPYNEFYEGYDSGTCTLPFMAHD
                     TDNIADLSTLWLQDLGSLVNLSDQQKSRSSSFSKRCFFNDMENIEKLNKDQYKFNPSS
                     IKKQRQLW"
     misc_feature    13..141
                     /gene="LOC139842852"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; Region: Bbox1_BBX-like; cd19821"
                     /db_xref="CDD:380879"
     misc_feature    169..297
                     /gene="LOC139842852"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; Region: Bbox1_BBX-like; cd19821"
                     /db_xref="CDD:380879"
ORIGIN      
        1 atgaagatcc aatgcgatat gtgcgagaaa atggaggctt ccgtctattg caccgccgac
       61 gaagcctccc tttgtcatgg ttgtgatcgt cgtgtccacc atgccaacaa actcgccagc
      121 aaacaccatc gtttctccct taacaattcc tccgatcaac cgcctttttg cgatatttgc
      181 caggaaaaaa gagcatttct gttttgcaaa gaagacagag cgattctttg tagacaatgt
      241 gacatctcaa tacacgtttc caacgaacac acaaaatatc acaatcgctt tcttctagca
      301 ggcgttaagc tttcagcttc gtcgtcctgt tatgatagtt catcggatca agctctatgc
      361 tcttcgaatt caattggatc tagtgaagct gagagtataa aaagctcatt tgctcctgga
      421 aaacaaaagg ctaaagcacc taagcactca tcttcagtga acaatcattg tgaccaattt
      481 aaccaacaaa taaacgtttc gatggagcca agtagcatat cggactactt aatggagaca
      541 ttacccgaat ggaatgtcga agaacttcta gatccttctg tgtcacatcc gtataacgaa
      601 ttctacgagg gatatgacag tggtacatgt acattgccat ttatggcaca tgataccgac
      661 aacattgcag atttgagtac tttatggtta caagatttgg gcagtttggt aaatttatca
      721 gatcaacaaa agtcaagatc aagtagcttc tcaaaaagat gtttctttaa tgatatggag
      781 aatattgaaa agttgaataa agatcaatac aaattcaatc cttcatctat caagaaacaa
      841 agacaactat ggtag
//
LOCUS       XM_071832954             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842853), mRNA.
ACCESSION   XM_071832954
VERSION     XM_071832954.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139842853"
                     /note="uncharacterized LOC139842853; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842853"
     CDS             1..720
                     /gene="LOC139842853"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689055.1"
                     /db_xref="GeneID:139842853"
                     /translation="MNKSARVKERVSTGGSLWEWTRTPLGRTRNELAEIEALIAPVPL
                     DSSKPDSWRWSMSGNGIFMVKKLSFEIDLKTTGLTNGIFETMRNNYVPKKVEVFIWRA
                     VKKRLPVLIELDKRGVNLNSVRCPICDDDLETVDHSLIFCKHVYDVWNRVYNWWNLGN
                     FPTLTITEALNGGGISHATSKGKFLWQAVSWVCAYHIWKLRNDAVFKGKKWNVPVALN
                     EIKIKSYEWISNRARGLNLDW"
     misc_feature    <262..444
                     /gene="LOC139842853"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgaacaaat cggcacgggt aaaagagcgg gtttcaacgg ggggctcgct ttgggaatgg
       61 acaagaactc cattgggacg cacgagaaat gaattggcgg aaatcgaagc tctaattgcc
      121 ccggtccctt tggattcgtc caaaccggac tcctggcgtt ggagcatgtc gggaaatggt
      181 atcttcatgg tcaagaaatt atcttttgaa atcgacttga aaacaacggg attgactaat
      241 gggattttcg aaactatgag gaacaactac gtaccaaaaa aagtcgaggt ctttatttgg
      301 agggcggtta aaaaacggct tcccgttcta atagagctcg ataaaagggg agttaacctc
      361 aatagtgtgc ggtgtcctat ttgtgacgac gatctagaga cagttgacca ttcacttatt
      421 ttttgtaaac atgtgtatga tgtttggaat cgggtatata attggtggaa ccttgggaat
      481 tttccaacac tcaccattac cgaagctcta aatggtggtg gtatttcaca cgctacgtct
      541 aaagggaaat tcttatggca agcggtctcg tgggtttgtg cttatcatat ttggaagctt
      601 cggaacgacg cggttttcaa aggaaaaaaa tggaatgttc cggttgccct aaatgagatc
      661 aaaatcaagt cctatgagtg gatctccaac agggcacggg gcttaaatct cgattggtaa
//
LOCUS       XM_071832955            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842854), mRNA.
ACCESSION   XM_071832955
VERSION     XM_071832955.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139842854"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842854"
     CDS             1..1077
                     /gene="LOC139842854"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071689056.1"
                     /db_xref="GeneID:139842854"
                     /translation="MSNIYKPKTPFNLNATSTPLSPIPKTPIEALNNPNWKLAMSDEF
                     AALINNKTWDLIPREPNMHVIRSMWIFKHKFRSNGSFERYKARLVGDGRLQQVGIDCM
                     ETFSPVVKPATIRVVLSLALSHSWQIRQLDVKNAFLHVNLQETLYMHQPMGFRDPTYP
                     DYVCRFFLNQSKYAKEILDRAGMSNCKPCNTPVEAKSKLSSHIGNPYADPSLYRSLAG
                     ALQYLTFTRPDILYSVQQICLHMHNPHDTHMAELKRILKYVQGTIDYGLHMTKTSTTS
                     LIAYTDADWAGCPDTRKSTSGYCVYLGDNLISWSSKRQPTISRSSTEAEYRGVAKIVS
                     ESCWLRNLLLELHHPLQSDHCLLR"
     misc_feature    148..>519
                     /gene="LOC139842854"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    832..>1053
                     /gene="LOC139842854"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgtcaaata tttacaaacc taaaaccccc ttcaatctta acgccacttc tacacctctc
       61 tctcccatac ccaaaacacc catcgaagct ctcaacaacc ccaattggaa actagccatg
      121 tccgatgaat ttgccgctct tattaataac aagacatggg atcttatacc tagggaacct
      181 aacatgcatg taataaggtc tatgtggatt tttaagcata aatttcgttc taacggttct
      241 tttgagcgtt acaaagctcg tttagttggt gatggcaggt tgcaacaagt gggaatcgat
      301 tgcatggaaa catttagtcc agttgtcaaa ccggctacta ttcgagtggt gttatctcta
      361 gctctctcac actcctggca aatacgtcaa ctcgatgtaa agaatgcttt ccttcatgtc
      421 aacttgcaag aaacgttata catgcatcaa ccaatgggat tccgggaccc aacatatccc
      481 gactacgttt gtcgtttctt tttaaatcaa tctaagtatg cgaaagagat tttagatcga
      541 gcaggaatga gcaattgtaa accatgcaat acacctgtag aagctaagtc gaaattaagc
      601 agccacattg gaaatccata cgctgatcca tctctttata gaagtttggc aggtgcgcta
      661 caatatctaa cgtttacaag gcccgatatt ttgtactccg tacaacaaat atgcctacat
      721 atgcataatc ctcatgatac acacatggca gagctaaaaa gaattctcaa atatgtacag
      781 ggtacgattg attatggctt acacatgaca aaaacgtcca ccacttcact catagcttac
      841 acagatgccg actgggctgg atgccccgac acacgcaaat ccacatccgg ttattgtgtc
      901 tatttaggtg acaatttgat ttcgtggtcc tcaaagcgtc aaccaaccat ttcacgatcc
      961 agtacagaag ccgaataccg aggtgtcgct aaaatcgtct cggaatcttg ttggctacgg
     1021 aatctgttac tagaacttca tcatccgcta caaagcgacc attgtttatt gcgataa
//
LOCUS       XM_071832956            1251 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842855), mRNA.
ACCESSION   XM_071832956
VERSION     XM_071832956.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1251
                     /gene="LOC139842855"
                     /note="uncharacterized LOC139842855; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842855"
     CDS             1..1251
                     /gene="LOC139842855"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689057.1"
                     /db_xref="GeneID:139842855"
                     /translation="MSFADALLVLCHGDEVSVSVLKDALDTFSQVSGLYPNLGKSTIF
                     FGSVPFVTRQKILQIMPFNIGKLPMRYLGIPLIARKLSLSDSKSLIDKVKEKVCSWRN
                     RKLSYAGRLLLINSVLNSMHIYWASVFMLPGNVLNEIEKILKSFLWCQGGNIRGKAKI
                     AWKTVCLPKDQGGLGIKPTREWNEVLLMKQWPEEWVAKFAVLNHIEIPVLLEKQDAVK
                     WIKNDDSRTAYSTNQAWLDLRANGSIKEWSHVVWFKQNIPKHAFILWLTLWNRLTTHE
                     NMLKWNPNSKFNCQLCQGDPDSVKHLFFECRYSRTFWEDMKSKILFKGLSFKIDDIME
                     VMSRYPYKRQIWSIITPIVIAAAVYFLWNERNNRIFKGIRRSEKDLSKLAQDYIRVKP
                     LTLKVKRSIAVERAERIWEIKWKS"
     misc_feature    <7..228
                     /gene="LOC139842855"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    685..930
                     /gene="LOC139842855"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagctttg cagatgccct tctagtatta tgccatggtg atgaagtttc tgtttctgtt
       61 ttaaaggatg cattggacac atttagccaa gtgtctggtc tttatcctaa cttgggtaaa
      121 agtactattt tctttggtag tgttccattt gttactagac agaaaatatt gcaaataatg
      181 ccattcaata ttgggaaact acctatgaga tatttaggta ttcctttgat tgctagaaag
      241 ctgagcttga gtgactccaa aagtttgatt gataaagtta aagaaaaggt gtgcagttgg
      301 aggaatagga agctttctta tgcagggagg ctgttattaa tcaattctgt gttaaattct
      361 atgcatattt actgggcctc agtgtttatg ctccctggaa atgtattgaa tgagattgag
      421 aagattctta aaagtttctt atggtgtcaa gggggaaata taagaggcaa agctaaaatt
      481 gcatggaaaa ctgtttgttt accaaaagac caaggtggtt taggtattaa acctactaga
      541 gagtggaatg aagttttatt aatgaagcaa tggcctgagg agtgggttgc taagtttgct
      601 gtacttaatc atattgaaat tcctgtttta ctggagaagc aggatgctgt aaaatggatc
      661 aaaaatgatg atagcagaac tgcatattct actaatcagg cttggttgga tcttagagct
      721 aatggttcca ttaaagagtg gtctcatgta gtttggttca agcaaaatat tccaaagcac
      781 gctttcatct tatggctgac tttgtggaat aggctcacca ctcatgagaa tatgttaaaa
      841 tggaatccaa acagcaagtt taattgccag ttgtgtcaag gtgatccaga ttctgtgaag
      901 cacttatttt ttgaatgcag atattctaga acattttggg aagatatgaa gagtaaaatt
      961 ctttttaaag gtctatcctt taaaatagat gacatcatgg aggtaatgtc aagatatcca
     1021 tacaagagac aaatttggag cataattacg cctattgtga ttgctgctgc tgtttatttc
     1081 ttatggaatg aacgtaataa caggattttt aagggtatta ggaggtctga aaaagattta
     1141 tccaaattgg cgcaagatta tataagagtc aaaccgttga ctcttaaagt caaacgttct
     1201 atagcagttg aaagagctga gagaatttgg gaaattaaat ggaagagctg a
//
LOCUS       XM_071832957            1590 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842856), mRNA.
ACCESSION   XM_071832957
VERSION     XM_071832957.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1590
                     /gene="LOC139842856"
                     /note="uncharacterized LOC139842856; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842856"
     CDS             1..1590
                     /gene="LOC139842856"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689058.1"
                     /db_xref="GeneID:139842856"
                     /translation="MASWNIRGMSNMDKQDEVKNLIKDEKLSICAVLETHLKPGNIAS
                     IGNNVFKNWEWLSNISHSANSCRIMNLQLSWYGTIVYAKNTGNARRLLWKELVIQSLI
                     TKDKPWVVFGDFNVIRKLDEHTAGGSFLTEDMIEFNDCIESIEVDDLGSTGFHYTWTK
                     SLKNLRCSVLKKLDRILVNDTFISSFPNAYGIFLPYIISDHSPAIIGITKSVNIVKKS
                     FRFMDYIAYKDEFLDIVKDEWSKEVNGYAMFSVVRKLKNLKKGLKMLNWSYGNLHSKV
                     DILKSKLKGVQQEVDDYPYDNGIRVAAQCVKHFKEFLGKATTVTPLNELGDIFTNKIP
                     EDTARRMVMEVTNSEIKAAIFDIDINKASGPDGYTSCFFQKAWTVIGDEICSAVKEFF
                     YTGKLLGELNATLIALIPKIDTPNKVSDFRPISCCNVLYKCISKILTNRIKEGLDLVV
                     NHSQTAFIPGRSIQDNIMITQELLKGYNRVNGPKRCSMKIDLQKAYDTVNWQFLEAVL
                     TKFGFHPKMVNWSLQPNFQSV"
     misc_feature    4..618
                     /gene="LOC139842856"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(13..15,100..102,241..243,337..339,343..345,520..522,
                     598..603)
                     /gene="LOC139842856"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(100..102,598..600)
                     /gene="LOC139842856"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(241..243,343..345,601..603)
                     /gene="LOC139842856"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
     misc_feature    1207..>1524
                     /gene="LOC139842856"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atggctagct ggaatataag gggcatgagt aatatggata aacaagatga agttaagaat
       61 cttattaagg atgagaagtt aagcatttgt gcagtgcttg aaactcacct taaacctggg
      121 aatattgcca gtataggcaa taatgtattc aaaaactggg aatggttatc taatatcagt
      181 catagtgcta atagctgcag gataatgaat cttcaattgt cttggtatgg tactattgtt
      241 tatgcaaaga atactgggaa tgctagaagg ttattatgga aggagttagt tattcaaagt
      301 ttaattacaa aagataagcc ttgggttgta tttggtgatt ttaatgtgat aaggaaactg
      361 gatgaacata cagctggagg atcttttttg actgaggata tgattgaatt taatgattgc
      421 attgaatcta ttgaagtaga tgatcttggg agcactggtt ttcattacac ttggactaaa
      481 tctcttaaga atctaagatg tagtgtgctc aaaaagctgg acagaattct agtgaatgat
      541 acctttataa gtagttttcc taatgcttat ggtattttcc tgccttatat tatctcagat
      601 catagtcctg ctatcatagg cataacaaaa agtgtgaata ttgtgaagaa gtcattcagg
      661 ttcatggatt atatagccta caaagatgag tttcttgata ttgttaaaga tgaatggtca
      721 aaagaagtca atggttatgc tatgttcagt gttgtaagga agttaaagaa tctaaaaaag
      781 gggttgaaaa tgttgaattg gagttatggt aatcttcatt ctaaagttga tatcttaaaa
      841 agtaagctta aaggggttca acaggaggtg gatgactatc cttatgataa tggcattagg
      901 gttgcagctc aatgtgtaaa gcattttaag gagtttctgg ggaaagccac tactgtaact
      961 cctttaaatg aactgggtga catttttaca aataaaattc ctgaagatac tgcaagaaga
     1021 atggttatgg aggttacaaa ttcagagata aaagcagcta tctttgatat agatatcaac
     1081 aaagcatctg ggcctgatgg gtatacttca tgtttctttc aaaaagcctg gactgttatt
     1141 ggtgatgaaa tatgtagtgc agtcaaagaa tttttttata ctggtaaatt gcttggagaa
     1201 ttgaatgcca cccttattgc cttaatccca aaaatagata ctccaaataa ggtgtcagat
     1261 tttagaccaa tttcgtgctg caatgtctta tacaagtgta taagtaaaat tctaacaaat
     1321 agaattaaag aaggtctaga tttggtggtc aaccacagtc aaacagcttt tattccagga
     1381 agaagtattc aggataatat aatgattact caagagctct taaaagggta caatagggtg
     1441 aatgggccaa agagatgttc aatgaagatt gatttgcaaa aagcctatga tactgtgaat
     1501 tggcagtttc ttgaagctgt attgactaaa tttggattcc atccaaaaat ggtgaactgg
     1561 tcacttcaac caaattttca atctgtgtaa
//
LOCUS       XM_071832958            1253 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tyrosine--tRNA ligase 1,
            cytoplasmic-like (LOC139842857), mRNA.
ACCESSION   XM_071832958
VERSION     XM_071832958.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1253
                     /gene="LOC139842857"
                     /note="tyrosine--tRNA ligase 1, cytoplasmic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 Proteins"
                     /db_xref="GeneID:139842857"
     CDS             1..1176
                     /gene="LOC139842857"
                     /codon_start=1
                     /product="tyrosine--tRNA ligase 1, cytoplasmic-like"
                     /protein_id="XP_071689059.1"
                     /db_xref="GeneID:139842857"
                     /translation="MEVLRYKVFPVRATRRASNPTPYSDVRNQQDYSLAVSNTSLAMD
                     VNCLPYPIQIGEKCIQEDELLNLLTNKPHPICYDGFEPSGRMHIAQGIMKTINVNKLT
                     SNGCKMKIWIADLFAQLNNKMGGDIEKIKTVGLYFIEIWKASGMDLDNVEFIFSSDEI
                     KSRSDEYWRPLVLDIAQRNKIFRIKRCCQIMGRNEQDNLSAAQIFYPCMQCADIFFLK
                     ADICQLGMDQLKVNVLAREYCDDIKRENKPVILSHHMLPGLKDGQEKMSKSDLSSAIF
                     MEDGEDDVNFKIMNAYCPDEIDKVNPCLEYVEDIVFPWFNEFKVERKEENGGEKVFTT
                     YEELVAAYKKKDLSPADLQRALSKALNKILQPVRDHFKNDEYAKALLQKVKSFKVTK"
     misc_feature    157..1173
                     /gene="LOC139842857"
                     /note="nucleotidyl transferase superfamily; Region:
                     nt_trans; cl00015"
                     /db_xref="CDD:469580"
     misc_feature    order(259..270,799..810)
                     /gene="LOC139842857"
                     /note="active site"
                     /db_xref="CDD:173853"
     misc_feature    order(259..261,268..270,802..804)
                     /gene="LOC139842857"
                     /note="nucleotide binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173853"
     misc_feature    259..270
                     /gene="LOC139842857"
                     /note="HIGH motif; other site"
                     /db_xref="CDD:173853"
     misc_feature    799..810
                     /gene="LOC139842857"
                     /note="KMSKS motif; other site"
                     /db_xref="CDD:173853"
ORIGIN      
        1 atggaggttt taaggtataa ggtttttcct gttcgagcta cccggagggc gagtaatccg
       61 accccatact ctgatgtacg caaccagcaa gattactccc tggctgtttc caacacatcc
      121 ctagccatgg atgtaaattg tctcccatat ccaatacaaa ttggggaaaa atgcattcaa
      181 gaggatgaac tcttgaatct tcttaccaat aagcctcatc cgatatgcta cgatgggttt
      241 gagccttctg gaagaatgca tatagctcag ggcattatga aaaccattaa tgttaataag
      301 ctgacatcta atggatgcaa aatgaaaatt tggatagcag atttgtttgc tcaactaaac
      361 aacaaaatgg ggggagacat tgaaaaaatt aaaactgttg gactctactt tattgagatt
      421 tggaaagcat caggaatgga tctagataac gtggagttta ttttctcatc tgatgaaatt
      481 aaatcaagat ctgacgagta ctggcggcct ttggttttgg atattgcgca aagaaacaaa
      541 atttttagga taaaaaggtg ctgtcaaatt atgggccgga atgagcagga taatctgagt
      601 gcagctcaga tattctatcc gtgcatgcaa tgtgcagata tattttttct taaggctgat
      661 atttgccagc taggcatgga tcagctcaag gtgaatgttc ttgcaaggga gtactgtgat
      721 gacatcaaga gggaaaacaa gccggtcata ctgtctcatc acatgctacc tggtttgaaa
      781 gatggacaag agaagatgtc aaaatctgat ctttcttctg ctatctttat ggaggatggc
      841 gaggatgatg ttaattttaa aataatgaat gcatactgtc cggacgaaat tgataaagtt
      901 aatccatgcc tcgagtacgt agaggacatt gtatttcctt ggtttaatga gttcaaggtt
      961 gaaagaaaag aggaaaatgg aggtgaaaag gtctttacga cttatgaaga actggttgct
     1021 gcctataaaa agaaggactt gagtcctgct gatttacagc gtgctttatc taaagcttta
     1081 aacaagattc tgcagcctgt tcgtgatcat ttcaaaaacg atgagtatgc caaggcttta
     1141 ttacaaaaag ttaagtcttt caaggtcaca aaatgatggt agtatttctg agcggggatg
     1201 tcaagatcaa gttaggttct aattttttgt ttcgttatat caaagtattt ggg
//
LOCUS       XM_071832959            1668 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides tyrosine--tRNA ligase 1,
            cytoplasmic-like (LOC139842858), mRNA.
ACCESSION   XM_071832959
VERSION     XM_071832959.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1668
                     /gene="LOC139842858"
                     /note="tyrosine--tRNA ligase 1, cytoplasmic-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842858"
     CDS             1..1668
                     /gene="LOC139842858"
                     /codon_start=1
                     /product="tyrosine--tRNA ligase 1, cytoplasmic-like"
                     /protein_id="XP_071689060.1"
                     /db_xref="GeneID:139842858"
                     /translation="MKKRLPVRIELDKRGIDLHSSRCPLCDEDLETTDHTMIFCSYTR
                     DIWNRVFQWWGLGSFLNYDFNEILGGNSGVSTSSFGKKIWQAVEWISAYYIWKNRNNR
                     IFRGTSWCAPVTLSEIQVKSFEWISLRSKGEKFDWLTWLSSPHINKIALAFQKKTIDR
                     KGIKMKNVEEKFKIVRSIGEECIQEEELLDLLKNNKPQPICYDALEPSGRMHIAEGIM
                     KIIHVNKLTSLGIKVKIWIADICAILNNKLGGDMKIIETVGRYMIEIWKASGMNLDNV
                     EFIWSSEEISSRSDEYWNLVLDIARRNTLRRIKMCCPDMDDKNDDKKDVAQIFYRCMQ
                     CADIIFLKADICQFGMDQLEVNVLAREYCDDIERKNKPVILSHHMLPDLLQGQEKKKK
                     MSTSDSSSAIFMEDEEAEVNLKIKKAYCPPNIVQGNPCLEYIKHIIFPWFNEFKVERK
                     AENGGEKVFTSFEKLVAAYEKGDLHPADLKPSLSKALNTILQPVHDHFKNDVSAKDLL
                     KRVKAFKVKEKEKEKERQRENSMVKKGESVSLTSSGESSTSSPSTTE"
     misc_feature    <1..138
                     /gene="LOC139842858"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
     misc_feature    502..1548
                     /gene="LOC139842858"
                     /note="nucleotidyl transferase superfamily; Region:
                     nt_trans; cl00015"
                     /db_xref="CDD:469580"
     misc_feature    order(634..645,1180..1191)
                     /gene="LOC139842858"
                     /note="active site"
                     /db_xref="CDD:173853"
     misc_feature    order(634..636,643..645,1183..1185)
                     /gene="LOC139842858"
                     /note="nucleotide binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:173853"
     misc_feature    634..645
                     /gene="LOC139842858"
                     /note="HIGH motif; other site"
                     /db_xref="CDD:173853"
     misc_feature    1180..1191
                     /gene="LOC139842858"
                     /note="KMSKS motif; other site"
                     /db_xref="CDD:173853"
ORIGIN      
        1 atgaagaaaa gattgccggt acgcattgaa ttggacaaaa gaggtatcga cctacatagt
       61 agtagatgcc ctctttgtga tgaagattta gaaactacgg accataccat gatcttttgc
      121 tcatacacac gggatatatg gaatcgggta tttcaatggt ggggcttggg atccttcttg
      181 aactatgatt ttaatgagat ccttggaggt aactccgggg tatcgacgtc atcattcggg
      241 aaaaagattt ggcaagcagt cgagtggata agtgcttact acatttggaa gaaccgtaac
      301 aacagaatat ttcgtggtac ttcatggtgt gctccggtta ctcttagtga aatccaagtc
      361 aagtcctttg aatggatttc tcttagatca aagggggaaa aattcgattg gctaacttgg
      421 ttgagtagtc cgcacataaa taaaattgca cttgcttttc aaaaaaaaac aattgatagg
      481 aaaggcatca agatgaagaa tgttgaagaa aaatttaaga ttgtgaggag tattggggaa
      541 gaatgcattc aagaggaaga actcttggat cttcttaaga ataacaagcc tcagccgata
      601 tgctacgatg cgctcgagcc ttccggaaga atgcatatag ctgagggaat tatgaagata
      661 attcatgtaa ataagctgac atctcttggt atcaaagtaa aaatttggat agcagatata
      721 tgtgctatat tgaataacaa attgggcgga gacatgaaaa taatcgaaac tgttggacgc
      781 tacatgattg agatttggaa agcgtcagga atgaatctag acaacgtgga atttatttgg
      841 tcgtcagaag aaattagttc aagatctgat gagtattgga atttggtttt ggatatcgct
      901 agaagaaaca cgcttcgcag gatcaagatg tgctgtccag atatggatga taagaatgat
      961 gataagaagg atgttgctca gatattctac cggtgcatgc aatgtgcaga tataattttt
     1021 cttaaggctg atatatgcca gtttggcatg gatcaactag aagtgaatgt tcttgcaagg
     1081 gagtactgtg atgacatcga gaggaaaaat aagcctgtca tattgtctca tcacatgctt
     1141 cctgatttgc tacaaggaca agagaagaag aagaagatgt caacatcaga ttcttcttct
     1201 gctatcttta tggaggacga ggaggctgaa gtgaatttaa aaataaagaa agcatactgt
     1261 ccgcccaata tcgttcaagg caatccatgc ctggagtaca taaaacatat catatttcct
     1321 tggtttaatg agttcaaggt tgaaagaaaa gcggagaatg gaggcgaaaa ggtctttacg
     1381 agttttgaaa aactggttgc tgcctatgaa aagggtgact tgcatcctgc tgatttaaaa
     1441 ccctctttat ctaaagcttt aaacactatt ctgcagcccg ttcatgatca ttttaaaaac
     1501 gatgtgagtg ccaaggattt attgaaacgt gtcaaggctt tcaaggtcaa agagaaagag
     1561 aaagagaaag agagacaaag agagaattca atggtaaaaa aaggtgaatc agtttcgctc
     1621 acttcatcgg gtgaatcatc aacttcgagt ccatctacta ccgagtaa
//
LOCUS       XM_071832960             861 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842859), mRNA.
ACCESSION   XM_071832960
VERSION     XM_071832960.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..861
                     /gene="LOC139842859"
                     /note="uncharacterized LOC139842859; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842859"
     CDS             1..861
                     /gene="LOC139842859"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689061.1"
                     /db_xref="GeneID:139842859"
                     /translation="MGFGDRWRKWIRSCLTTASVSILVNGSSTREFSLERGIRQGNPL
                     SPFLFILAAEGLNILAKSALNKGLFNGIEVGNDKVMVSHLQYADDTIFFGECSRSNAR
                     NLQKLLKCFELASGKFFWDGSDTGLKISWVKWDTILNSYGLDGLNIGSLKGKNLALLA
                     KWWWRFKTETNSLWGKVIRSIYGSSGGLESGGDLGYRPALGTWYNIILAGNCIEDLEI
                     KFKNSLSKTIGNGSDTSFWNDVWVGNAKLSVLFPRLYRLEAEANVTVAARFQGGSSTR
                     LGLVNQWAVG"
     misc_feature    <109..399
                     /gene="LOC139842859"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    121..123
                     /gene="LOC139842859"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atggggtttg gtgatagatg gcgtaagtgg atacggtctt gtttaaccac ggcttcggtt
       61 tctatacttg ttaacgggtc ttcgacaaga gaattctcac ttgaaagggg tattaggcaa
      121 gggaatccat tatccccttt cctatttatc cttgcggcgg aaggtcttaa catacttgct
      181 aaaagtgcct taaacaaggg actttttaat ggcattgaag ttgggaatga taaagttatg
      241 gtctcacatt tgcaatatgc ggatgacacc atttttttcg gagaatgtag tcgatctaat
      301 gcgcgaaacc ttcaaaaatt gctcaaatgt ttcgaattgg cttcgggaaa gttcttttgg
      361 gacgggtcgg acacgggttt aaaaatttct tgggttaaat gggacactat ccttaattct
      421 tatgggttgg acgggttaaa catcgggtct cttaagggta aaaacttggc tttacttgca
      481 aagtggtggt ggaggttcaa aaccgaaact aactcacttt ggggtaaagt gattcgtagc
      541 atttatggtt cgagtggtgg cttggagtcg ggtggtgact taggttaccg ccccgctttg
      601 ggcacttggt acaatattat tcttgcaggt aattgtattg aagaccttga gattaagttc
      661 aagaattcat tatcgaagac tattgggaat gggtcggata cttctttttg gaacgatgtt
      721 tgggtaggaa acgccaagct cagtgtattg tttcctaggc tataccgatt agaggcagag
      781 gctaatgtca ctgttgcagc acgctttcaa ggggggtctt caactagact tgggctcgtg
      841 aaccaatggg ccgtgggcta g
//
LOCUS       XM_071832961            1149 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842860), mRNA.
ACCESSION   XM_071832961
VERSION     XM_071832961.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1149
                     /gene="LOC139842860"
                     /note="uncharacterized LOC139842860; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842860"
     CDS             1..1149
                     /gene="LOC139842860"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689062.1"
                     /db_xref="GeneID:139842860"
                     /translation="MVGKSGGQLLVWDTTIFEAISVIRGDYFIGVSRKWIGSGSNCNI
                     VSVYGPHDDSGKQKFWDELSKAIVSDVNNAWVLCGDFNEVRNEAERFNCDFIEYMAKR
                     FNDFVSDNCLIEIPMSGRIYTRVSGDGLKFSKLDRFLVTENFLHTWKDLTACIMDRHL
                     SDHCAIILMDEERDFGPKPFKIFDAWLDDEEVSKVIEDAWDKEVAVINRKDCVFRNRL
                     KNVKNAIKDWSRNRLDKLDVEIEMHKSIAKDLELRAEVLNLNETELENWKNSRKCENQ
                     MGIGGDENSKFFHSVMRMRNNRNTIRGLLIDGVWNNSPDDIKAEVALHFANRFKECEH
                     ERPSLDEMEYYMLNASEAASLEVKFDEKEIREAIFDCDGNKAPGSRPV"
     misc_feature    <34..504
                     /gene="LOC139842860"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(142..144,244..246,487..489)
                     /gene="LOC139842860"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atggtaggca aatcaggtgg gcagttgtta gtttgggaca ccactatttt tgaggctatt
       61 tcggttatcc ggggtgacta tttcatcggg gtttctagga agtggatagg ttcgggttcg
      121 aattgtaaca ttgtaagcgt gtatggacca catgacgata gtggaaaaca aaaattctgg
      181 gatgaattat cgaaagcaat tgtatcggat gtgaataatg cgtgggtgct gtgtggagat
      241 tttaacgaag ttaggaatga ggctgagaga tttaactgtg atttcattga atacatggca
      301 aaaagattca acgatttcgt aagcgataat tgtttgattg aaattccaat gtcgggtcgt
      361 atctacactc gggttagcgg agacgggtta aagtttagta agttagatag attccttgtg
      421 acagagaatt ttctacacac ttggaaggac ctgacggcgt gtatcatgga tagacaccta
      481 tcggaccatt gtgccattat tttaatggat gaagagagag attttggtcc taaaccgttt
      541 aaaatttttg atgcttggtt ggatgatgag gaagttagta aagttataga agatgcttgg
      601 gataaggagg ttgcggtgat aaataggaaa gactgtgtgt ttagaaatag acttaaaaat
      661 gtgaaaaatg cgattaagga ttggagcaga aataggcttg ataaacttga cgttgaaata
      721 gagatgcata agtcgattgc taaggatctt gagctgaggg cggaagtgtt aaatctgaat
      781 gaaacggaat tggaaaattg gaaaaattcg agaaaatgcg agaatcaaat gggcattgga
      841 ggggatgaaa atagtaagtt ctttcattcg gtcatgcgta tgaggaataa tagaaacact
      901 attcgtggtc ttcttattga tggtgtttgg aataattcac cggatgatat taaagctgag
      961 gtagctttac actttgctaa tcggttcaaa gaatgcgaac atgagagacc gagtctggat
     1021 gagatggaat actacatgct caatgcatct gaggctgcaa gtttggaggt aaagtttgat
     1081 gaaaaagaaa ttcgtgaggc aattttcgat tgtgatggca acaaagcacc cgggtcccga
     1141 ccggtttaa
//
LOCUS       XM_071832962             999 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin carboxyl-terminal
            hydrolase 15-like (LOC139842861), mRNA.
ACCESSION   XM_071832962
VERSION     XM_071832962.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 4 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                JBITNF010000004.1  584429372-584429469
            99-170              JBITNF010000004.1  584429528-584429599
            171-194             JBITNF010000004.1  584430487-584430510
            195-338             JBITNF010000004.1  584431263-584431406
            339-366             JBITNF010000004.1  584431510-584431537
            367-368             "NN"               1-2
            369-462             JBITNF010000004.1  584431538-584431631
            463-588             JBITNF010000004.1  584431719-584431844
            589-589             "N"                1-1
            590-620             JBITNF010000004.1  584431845-584431875
            621-705             JBITNF010000004.1  584431948-584432032
            706-750             JBITNF010000004.1  584432111-584432155
            751-855             JBITNF010000004.1  584432157-584432261
            856-999             JBITNF010000004.1  584432263-584432406
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..999
                     /gene="LOC139842861"
                     /note="ubiquitin carboxyl-terminal hydrolase 15-like; The
                     sequence of the model RefSeq transcript was modified
                     relative to its source genomic sequence to represent the
                     inferred CDS: inserted 3 bases in 2 codons; deleted 2
                     bases in 2 codons; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139842861"
     CDS             1..999
                     /gene="LOC139842861"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 3 bases in 2 codons;
                     deleted 2 bases in 2 codons; substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:244..246,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
                     hydrolase 15-like"
                     /protein_id="XP_071689063.1"
                     /db_xref="GeneID:139842861"
                     /translation="MLFPLEIFWKYFQYESFEFSPRGLVNCGISYLNCYANAVLQCLT
                     FTKALTIYFDAYPIRRSETQKLCKSWRLMCELEHYVTXKWRAIVFLLHMRSVNCKIGD
                     GSQEDAHEFLRLLITSLQTIXTETLGGEDVVDPKLQETTFIQHIFGSQLRSKFKCLRC
                     HHESDRYENFMDLTLEIFGRVESLEDVLTQFTSPKDXDGENMYRCGRCAAYVQVRKQL
                     AIQEAPNILTIVLKRYQEGGYGKLNKCTSYPEVLNMIPFMSAKDDIPPLYTFHGVVVH
                     LDIMNASFSVAGHYISCVKDLRGNWSRIDDALELQVQQVPLSQVMSEGAYILFYTW"
     misc_feature    61..990
                     /gene="LOC139842861"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; Region:
                     Peptidase_C19; cl02553"
                     /db_xref="CDD:470612"
     misc_feature    order(76..78,100..102,865..867,916..918)
                     /gene="LOC139842861"
                     /note="active site"
                     /db_xref="CDD:239072"
ORIGIN      
        1 atgctatttc cattagaaat attttggaag tacttccaat acgaaagttt tgaattctca
       61 ccaaggggcc ttgtaaattg tggaattagc tacttaaact gctatgcaaa tgctgtgttg
      121 cagtgtttga cgtttacaaa ggctctgact atctattttg atgcatatcc tattcgaagg
      181 tcagagacac aaaagttatg caaaagttgg cgcctaatgt gtgaacttga gcactatgtc
      241 acgtgaaagt ggcgagccat tgtctttctt ttgcatatgc gaagtgtaaa ttgcaaaatc
      301 ggagatggga gccaggaaga tgctcatgaa tttttaaggc tcttgatcac ctctttgcaa
      361 actatannta ctgagacttt aggtggggaa gatgtagttg atcctaaatt gcaagaaaca
      421 acctttattc aacatatttt tgggagtcaa ctcaggtcaa aattcaaatg tctgagatgt
      481 catcatgaat cagatagata tgaaaacttt atggatctta ccctagagat atttgggcgg
      541 gtcgagtcac tagaagatgt attaacccaa ttcacaagtc ctaaagatnt ggatggagaa
      601 aacatgtata gatgtggaag gtgtgctgct tatgttcaag tacgaaagca attggctata
      661 caggaagctc caaatatatt gacaattgtg ttgaagcgtt atcaggaggg cggttatgga
      721 aaattaaata agtgtacctc gtatcctgaa gtgttgaata tgataccatt tatgtcggcg
      781 aaagatgaca ttcctccatt atacacattt catggtgtcg tggtgcattt ggacataatg
      841 aatgcatcgt tttctgtcgc aggtcactat atatcatgtg tcaaagatct tcgaggaaat
      901 tggtccagaa tcgatgacgc tctggagttg caggttcaac aagtaccttt gagccaggtt
      961 atgtcagaag gtgcatacat attgttttac acatggtaa
//
LOCUS       XM_071832963            1005 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842862), mRNA.
ACCESSION   XM_071832963
VERSION     XM_071832963.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1005
                     /gene="LOC139842862"
                     /note="uncharacterized LOC139842862; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842862"
     CDS             1..1005
                     /gene="LOC139842862"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689064.1"
                     /db_xref="GeneID:139842862"
                     /translation="MTLIIRCVDVSSSPIKVEEFFIEFLIVEDTTGLGLFKVLQDVLK
                     SLDLDIKYIRGQEYDNGSNMKGQHSDVQARLLEINRRAFYMSCGCHCLNLENGLDNAI
                     NEAKQIAETVEIEPELSVKRASCRKKQFDEISNTEREQQSAKDQFRTDYFIVLVDMAL
                     VQLNSRFKQMKNFESIFGFLFDASKLAYLDIVKLKECCMNLESALTCDNDSDIDGNDL
                     FMELKVLKDMLPKKAYEGERPWTSIQIMEFTKDMDLFPNILLAYKILLTVSVTVASAE
                     RSFSKLKLLKSYLRSTMSQERLNGLAILSIENKFLADIDYEKIIDDFASRNAQRQRFR
                     "
     misc_feature    <1..207
                     /gene="LOC139842862"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    <757..924
                     /gene="LOC139842862"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atgaccctaa ttattagatg tgttgatgtg tcgagttctc ctattaaagt agaagagttc
       61 tttatagagt ttttgattgt agaagataca acaggtttag gtctttttaa agtattacaa
      121 gatgttttaa aatctcttga tttagatatt aaatatatta gaggacaaga gtacgataat
      181 ggatctaata tgaagggaca acattcagat gttcaagcta gattacttga aataaaccga
      241 agagcttttt atatgtcttg tggttgtcac tgtcttaatt tggaaaatgg gttggacaac
      301 gctattaacg aagctaaaca aattgcagaa actgttgaaa tagaacctga attgtctgta
      361 aaacgagcat cttgtagaaa aaaacaattt gatgagatct caaatactga aagagaacaa
      421 caatctgcta aagatcaatt tagaacagat tactttattg ttttagttga tatggctctt
      481 gtacaattaa atagtagatt taaacaaatg aaaaattttg aatcaatttt tggtttcttg
      541 tttgacgcat caaagttagc ttatttggat attgtcaagt tgaaagaatg ttgtatgaat
      601 cttgaatctg ctttgacatg tgataatgat tctgatatag atggaaatga cttgtttatg
      661 gagttaaaag ttttgaagga catgttgcca aaaaaagcgt atgagggaga aagaccttgg
      721 acatctattc aaattatgga gtttacgaag gacatggatt tgtttcctaa catcttactt
      781 gcatacaaga ttttgttaac cgtatcagtc acggtagcat cagcagaaag aagtttttca
      841 aaattaaagt tattgaagtc ctatttacgg agtacaatga gtcaagagcg gctgaatgga
      901 ttagcaattt tgagtattga gaataagttt ttagctgata ttgattatga aaagataatt
      961 gatgattttg cttcgagaaa tgctcaaagg caacgtttta ggtga
//
LOCUS       XM_071832964             708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842863), mRNA.
ACCESSION   XM_071832964
VERSION     XM_071832964.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..708
                     /gene="LOC139842863"
                     /note="uncharacterized LOC139842863; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842863"
     CDS             1..708
                     /gene="LOC139842863"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689065.1"
                     /db_xref="GeneID:139842863"
                     /translation="MNVKQRRIYELICDSSSNNRTELVFVYGHGGTGKTFLWKAIIKC
                     LRAKGKIVLVVASSGIASLLLPSGRTAHSRFKLPIDLTDESMCNVNKNTQMAKLLEST
                     DLIVWGEASMNNKRCFEALDRSLRDILGNKNSPFGGKSMILGGDFKQTLPVHKKGKKS
                     TIVRSCITSSYLWQEFKVFVLTENMRLMQPGLTPSEKERNTAFSAWLLDIGNGEVGTR
                     DLEDPINSSWVQIPDTY"
     misc_feature    1..>702
                     /gene="LOC139842863"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
     misc_feature    order(88..108,322..324)
                     /gene="LOC139842863"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:350670"
ORIGIN      
        1 atgaatgtga agcagagaag aatctacgaa ctgatatgtg attcttcctc gaacaacagg
       61 acagagcttg tgtttgttta tggtcatggt ggcaccggta agacattctt atggaaggcc
      121 ataatcaagt gtctaagggc caagggaaag attgttcttg ttgtggcatc gtccggaatc
      181 gcatctttgt tactgccttc gggcagaaca gctcactctc gattcaaact acctattgac
      241 cttaccgatg agtcgatgtg caatgtaaac aaaaacacac aaatggcgaa actacttgaa
      301 agcacagatc ttattgtgtg gggtgaggca tcgatgaata ataagcgatg cttcgaagct
      361 cttgatcgca gcctgcgaga cattcttggt aacaaaaact cgccatttgg aggtaagtct
      421 atgattctcg gtggtgactt taaacaaaca ttacccgttc ataaaaaagg aaagaaatcg
      481 actatagtac gctcttgcat tacatcttca tatttgtggc aggaattcaa ggtgtttgtt
      541 cttactgaaa atatgcgctt aatgcagcca gggctgacgc catcggaaaa ggagagaaac
      601 actgctttct ccgcctggtt actggatatt gggaatggcg aggttgggac acgtgatttg
      661 gaagacccga ttaatagtag ttgggtacaa attcctgaca cctactga
//
LOCUS       XM_071832965            1527 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842864), mRNA.
ACCESSION   XM_071832965
VERSION     XM_071832965.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1527
                     /gene="LOC139842864"
                     /note="uncharacterized LOC139842864; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842864"
     CDS             1..1527
                     /gene="LOC139842864"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689066.1"
                     /db_xref="GeneID:139842864"
                     /translation="MYSHYLDALAICRVFGNLQFFVTFTCNVKWPEIARYLQPFPLLT
                     ASDRADIVARVFHFKVKQFVAFLKDGNPLGDFRGVLYTIEFQKRGLPHCHTLLWLYSS
                     ASSPISEIIDDYISAELPDPRTNLAGYAVVSATTMHGSCGIPNLRAPCMEGPTCTKNF
                     PKKYNDKTFFDVDGRAHYRRRNTGVYTTRSGVHLDNSYVVPYNRLLCMTFQAHINVEC
                     CGSTTLIKYLFKYISKGTDRITARISKPVGSNNRVRPQVSQPVDEVQNFIDARFICSH
                     ETCWRIFNFPIHHREPAVQILHLAYLDFPSEFVWYQAQKSWKRRVNINKSSIGRMSYI
                     HPSFGEAFFLRMLLYHQKGCTSFVDIRTVNQVEYQTYRSACVAAGLLGDDKEWTIVLE
                     EASASATASQLGSLFAHILVYSEVSNSLALWEKHWEMMSDDIPLRAAASLKMAKLHIN
                     RDDLRNYVLYEVEILLNQCGKTLSDFALPSLPDDLLLDLANRLIMEERTMIVNRLMRI
                     "
     misc_feature    <1..291
                     /gene="LOC139842864"
                     /note="Helitron helicase-like domain at N-terminus;
                     Region: Helitron_like_N; pfam14214"
                     /db_xref="CDD:464105"
ORIGIN      
        1 atgtacagcc actatcttga cgccctggcg atttgtcgtg tttttgggaa tctgcagttc
       61 tttgtcactt ttacttgcaa cgttaagtgg ccagaaatag ctcgatatct gcagcctttt
      121 cctctgctta ctgcatcaga ccgtgctgat attgtcgcga gagtttttca cttcaaagtc
      181 aaacaatttg tcgctttttt aaaagacggg aacccactgg gtgactttag aggagttctg
      241 tataccattg agttccagaa aagagggttg ccccattgtc acacattgtt gtggttgtat
      301 tcctcagcct catcacctat aagcgaaata atagatgatt acatatctgc cgaacttcct
      361 gacccgagaa ctaacctcgc tggttatgca gtggtctccg cgactacgat gcatgggtcc
      421 tgtggcattc ccaacttacg tgcaccgtgc atggaagggc ccacttgcac aaaaaatttc
      481 ccaaaaaaat acaacgacaa aaccttcttt gatgttgatg gtcgtgcaca ctaccgaagg
      541 cgtaatactg gtgtgtatac aacgcgttcc ggggtccatc tcgataacag ctatgtagtt
      601 ccttacaaca gactactttg tatgactttc caagctcata taaatgttga gtgctgtgga
      661 tcaacaaccc tgatcaaata cctgtttaag tacatttcaa agggtaccga ccgcattact
      721 gctcgcatat ccaaaccagt tggtagtaac aaccgtgtga ggccacaagt ctctcaacca
      781 gtagatgaag ttcagaattt tatagatgcc cgtttcattt gctcgcatga gacttgctgg
      841 cgtattttta acttcccaat tcatcatcgt gaaccggcag ttcagatcct gcacctggca
      901 tatttggatt tcccatctga atttgtttgg tatcaagcac agaaaagctg gaaacgtagg
      961 gtgaatatta acaagtcttc gattggaagg atgtcataca tacatccctc attcggagag
     1021 gcttttttcc taagaatgct tttgtaccat caaaaggggt gcacaagctt tgtagatatt
     1081 agaaccgtga accaagttga ataccagaca taccgttctg cttgcgtggc cgctgggctt
     1141 cttggtgatg ataaagaatg gactatagta ctggaggaag catcggcatc cgccactgct
     1201 tctcagttgg ggtcactttt tgcacacatt ctggtgtatt ccgaagtctc gaattcgctt
     1261 gctctttggg aaaagcactg ggaaatgatg tctgacgaca tacctttgcg agcagcggcc
     1321 tctctaaaga tggcgaagct gcacataaac agagatgacc ttcgtaatta tgttctttat
     1381 gaggttgaaa tcctcctaaa ccagtgtgga aagacactca gcgacttcgc attgccatct
     1441 ctgccagatg accttctact agatcttgca aatcgtttga tcatggagga gagaactatg
     1501 atcgtgaatc gcttaatgag gatttga
//
LOCUS       XM_071832966            2628 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable LRR receptor-like
            serine/threonine-protein kinase At1g53440 (LOC139842865), mRNA.
ACCESSION   XM_071832966
VERSION     XM_071832966.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2628
                     /gene="LOC139842865"
                     /note="probable LRR receptor-like serine/threonine-protein
                     kinase At1g53440; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139842865"
     CDS             1..2628
                     /gene="LOC139842865"
                     /codon_start=1
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g53440"
                     /protein_id="XP_071689067.1"
                     /db_xref="GeneID:139842865"
                     /translation="MLDGQEVSDVEGLVTEKGDLQVTLSFLFSGITVAEIKTNGWFMK
                     ELDCNLLLNFCQLKKLKLFGQYPQLQIRDWVVASNSCSGGGRLNNTISLNNQGLRVFG
                     SNVTCKCNTTECHITHIQLKGLNLTGALPEEFANLTFLQELDLTQNYISGSIPARFAQ
                     LPLTILSLLGNRISGPIPSEIGDILTLEELVLEDNLLEGPLPSNLARPPRLRRILLSA
                     NNFSGAIPESFGNLTNLEDFGIDGSTLSGRIPSFIGNWTRITRLDMQGTSMEGPIPST
                     ISLLTNLTELRITDLTGPSATFPNLQNMRRMIRLYLRNCLLTGSIPEYIGQMTQMKNL
                     DLSFNMLEGQIPDSMGMMDFDTVFFNNNSLSGNVPGWAFIGTRKIDLSYNNFTQIQQE
                     NCNPSSLNLVSALSSSVTNNGNGWCMTDGLTCSRNPNRYSLFINCGGATLNFEGNEYE
                     QDSTDEQSYFYPSDERWAYSSNGVFLNNAKAPFVTTTANVTGGDLYKTARLSPTSLRY
                     YGLCLRKGSYKVRLHFAEIMYTDDTTFSSLGRRFFDVSIQGQLLLKDFNIREEANGTN
                     KGIYRDFDNINVNGSTIEIHLYWAGKGTTAIPDRGVYGPLISAITITPNFDIPTDGLS
                     AGAIAGIVIGSCAFVVLILAVLWKKGYLGAKDEDKELRGALELQTGYFSLRQIKAATN
                     NFDAVNKIGEGGFGPVFKGILSDGSEIAVKQLSSTSKQGNREFVTEIGMISALQHPNL
                     VKLYGCCIEGNQLLLIYEYLANNSLARALFGKDNQRLNLDWATRQKICIQVARGLAYL
                     HEESRLKIVHRDIKATNVLLDKELNAKISDFGLAKLDEEENTHISTRVAGTIGYMAPE
                     YAMRGYLTDKADVYSFVKD"
     misc_feature    148..2616
                     /gene="LOC139842865"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional; Region: PLN00113"
                     /db_xref="CDD:215061"
     misc_feature    349..417
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    418..483
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    487..558
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    559..630
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    631..702
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    703..774
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    775..846
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    847..909
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    910..990
                     /gene="LOC139842865"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1291..1830
                     /gene="LOC139842865"
                     /note="Malectin domain; Region: Malectin; pfam11721"
                     /db_xref="CDD:432024"
     misc_feature    2068..>2616
                     /gene="LOC139842865"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; Region: Protein
                     Kinases, catalytic domain; cl21453"
                     /db_xref="CDD:473864"
     misc_feature    order(2068..2079,2086..2088,2092..2094,2128..2130,
                     2134..2136,2221..2223,2269..2280,2428..2430,2440..2445,
                     2449..2451,2479..2484)
                     /gene="LOC139842865"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270870"
ORIGIN      
        1 atgttagatg gtcaggaggt cagtgatgtt gaaggtttag ttacagaaaa aggtgatctt
       61 caagttactc tctctttttt gttttcagga atcacagtgg ctgagataaa aacaaatgga
      121 tggtttatga aggaattaga ctgcaatctg ctgctcaact tttgccagct gaagaagttg
      181 aagctcttcg gacaatatcc tcagctacaa attagggatt gggtggttgc tagtaattca
      241 tgcagcggag gtggacgtct taataacaca atttctctaa acaaccaagg gcttagagta
      301 tttggcagca atgtaacctg caaatgtaat accaccgaat gccacattac gcacatccag
      361 ttgaaggggc ttaacttgac tggagcgctg cctgaagaat tcgcaaacct cacttttcta
      421 caagaactag atctcactca aaactatatc agtggaagta ttccagcacg ttttgctcag
      481 cttcccctta ccatattgag tcttttggga aatcgcatca gtggtcccat acctagtgaa
      541 ataggtgata tcctaacact agaggaacta gtcttggaag acaatttgct cgagggacca
      601 cttccttcaa acctcgcacg tccacctcga ttgagaagaa tccttctttc tgcaaataat
      661 ttttcagggg ccattccaga atctttcggc aatctgacta atctagaaga ttttgggata
      721 gatgggagta cattatcagg gagaatacct agcttcatcg gaaactggac aagaatcacg
      781 cgacttgata tgcaaggaac gtcaatggag ggacctattc cttcaacaat atctctttta
      841 accaatttaa ctgaactgag aataactgat ttgaccggac caagtgcaac ttttcctaat
      901 ctgcaaaata tgagacgcat gattagactg tacctgagaa attgtttact taccggttca
      961 ataccggaat acataggaca gatgactcag atgaaaaact tagacctgag tttcaacatg
     1021 ttggaaggtc aaatacctga ttcaatgggg atgatggact ttgacaccgt gtttttcaat
     1081 aacaactcct tatctggaaa cgtccctgga tgggcattca tcggcactag aaagattgac
     1141 ttatcctata acaacttcac acaaatacaa caagaaaatt gcaatccatc gagcttgaat
     1201 ttagtctctg cactttcatc ttcagtgaca aacaacggaa atggttggtg tatgacagac
     1261 ggacttactt gcagcagaaa ccccaaccga tattctttat ttattaattg tggtggagcc
     1321 actttaaact ttgaaggaaa cgaatacgaa caagactcaa ctgatgaaca gtcttacttt
     1381 tacccttctg atgagagatg ggcttatagc agcaacggtg ttttcttgaa caacgctaaa
     1441 gccccatttg taacaactac agcaaacgtg acaggtggcg atttgtacaa aactgcccgt
     1501 ctttctccta cttctctcag atactatgga ttgtgtttga gaaaaggtag ctataaagta
     1561 cgcctacact tcgctgaaat tatgtacacg gatgatacta cgtttagtag cctgggaagg
     1621 cgtttttttg atgtatcaat ccaaggacaa ttactattga aggacttcaa cataagggaa
     1681 gaagctaacg gtaccaacaa gggtatctat agagattttg ataatattaa tgttaatggt
     1741 agcacgatag agatccattt atactgggcg gggaaaggga ctactgcaat tcccgatcga
     1801 ggtgtatacg gtccgcttat atcagctatt actataacac caaactttga tatcccgaca
     1861 gacgggctct ctgctggagc gatagctgga atcgtgattg gttcatgtgc atttgtcgtc
     1921 ttgattttag ctgttctttg gaagaaaggt tacctggggg cgaaagatga agacaaagaa
     1981 cttcgagggg ctcttgaatt acagacgggc tattttagtc tgagacaaat caaagctgct
     2041 acaaataact tcgacgctgt aaacaagatt ggtgaaggcg gatttggacc cgttttcaag
     2101 ggtatactct cagatggttc tgaaatcgct gttaagcaac tctcgtcaac atcaaagcaa
     2161 ggaaatcgag aatttgtgac cgagataggc atgatatctg ctctacaaca tccgaacctc
     2221 gttaagcttt acggatgttg tatagaagga aaccagctgt tactgatcta cgagtacctt
     2281 gcaaacaata gtcttgcacg cgctcttttt ggtaaagaca accaacgcct taatttagac
     2341 tgggccacaa gacaaaagat atgcatacaa gtagcccggg gcttagctta tctccacgag
     2401 gaatcaagat tgaaaattgt tcacagagac ataaaggcca caaatgtgct tcttgataag
     2461 gaacttaacg cgaaaatatc agattttggt ctagcgaaac ttgatgaaga agaaaacacc
     2521 catatcagca cacgagttgc tgggacaatt gggtatatgg ctccagagta cgcaatgaga
     2581 ggatacttga cagataaagc agatgtttac agctttgtga aggattaa
//
LOCUS       XM_071832967            1560 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842867), mRNA.
ACCESSION   XM_071832967
VERSION     XM_071832967.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1560
                     /gene="LOC139842867"
                     /note="uncharacterized LOC139842867; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842867"
     CDS             1..1560
                     /gene="LOC139842867"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689068.1"
                     /db_xref="GeneID:139842867"
                     /translation="MAERMGCKAGKLPFIYLGLPIGTRMTSVSAWQPVIDKFKSRLSD
                     WKMWSTSFGGRLVLIKSVLSSLPLYYFSLFRAPSSVTKLLESVRRIFFWGGDLSGNKI
                     SWVKWDKVISSYEAGGLNIGSLKSENLALLGKWWWRFKTETDSPWVKVIRSLYGANGS
                     LVMDVDNSQCSSLGVWANIIRAGKHIEDLQIQFKDSFDKIVGNGESISFWNDCWCGTN
                     NFRELFPRLYRLENNKNVYVQARLITCVSYNTSVLRASDGDVSASDNSINSAASRVLP
                     AVGSQFVTAAVQSRPATGVSVPVDTANNSWVHADNPSGFNGDTNNIVWDWVRHPTGRT
                     LGELSVLKNLLRNVNLDQGKKDSWKWSLSSNGLFSIELFVWRTLLKRLPVRLELDSRG
                     IDLHSVRCPLCDDGLESVEHSIILCRHAQDVWCRVFKWWDRGTFLGSSLSDLLRDSVN
                     VGLIWQGVIWVTSYLIWKNRNNMVFRNKSWSAPVALCEIQAISFDWLSCKYKGAKIEW
                     NTWLTQPSTYL"
     misc_feature    <1066..1269
                     /gene="LOC139842867"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggccgaaa gaatgggatg taaagcgggg aagctacctt ttatttacct tggcctccct
       61 attggcacta gaatgactag tgtttcggct tggcaaccgg tgatagataa attcaaaagc
      121 cgtttatcgg attggaaaat gtggtcgacc tcatttggcg ggcgtctagt cctcattaaa
      181 tcggttctaa gtagtcttcc gttgtattat ttttcgctat tccgtgcccc atcgagtgtc
      241 accaaattac ttgagagtgt gagacgtata tttttttggg gcggggatct ttcgggaaac
      301 aaaatatcgt gggttaaatg ggacaaggtc atatcctcat acgaggcggg gggtcttaac
      361 attgggagtc ttaaaagcga aaatttagcc ttacttggga aatggtggtg gaggtttaaa
      421 accgaaaccg attccccatg ggttaaagtg attcgtagtt tgtatggcgc taatggtagc
      481 ttagtgatgg atgttgataa ctctcaatgt tcatcactag gtgtttgggc taatattatt
      541 cgtgcaggga aacatattga agatttgcaa attcaattca aggactcttt cgacaagatc
      601 gttggcaatg gtgaatccat atccttttgg aatgattgtt ggtgcgggac taataatttt
      661 cgtgaattgt ttccaagatt atatagatta gaaaataata aaaatgtcta tgtccaagct
      721 cgtctgatta cttgtgtttc gtataatact tcggttctta gagcttctga tggggatgtt
      781 tctgcctcag acaattcgat caactcagct gcaagtcgtg tcctccctgc cgtcggttct
      841 cagtttgtta ctgctgctgt tcagtcacgg cctgctacag gggtttcggt tccagtcgat
      901 acagcaaata attcctgggt tcatgcggat aatccctcgg gttttaatgg ggatacgaat
      961 aatatagttt gggattgggt tcggcatcct acagggcgca ctctaggtga attatcggtt
     1021 ttaaaaaatc tgcttcgcaa tgtaaacttg gatcaaggaa aaaaagacag ctggaagtgg
     1081 tctctctcat cgaatgggct attttcgatc gaactatttg tatggcgaac tttgttgaag
     1141 cgtcttccgg ttaggcttga gcttgactct aggggcattg atctacatag cgttcgttgc
     1201 cctctatgcg atgatggcct cgaatcggta gaacactcga taattctttg tcgacatgct
     1261 caagacgtgt ggtgtcgggt cttcaaatgg tgggatcgtg gaactttctt gggttcttct
     1321 ttatcggatc ttcttcgtga tagtgtcaac gtgggcttga tttggcaagg agtcatttgg
     1381 gtcacttcat acctaatttg gaaaaaccgc aacaatatgg tttttcgtaa caaaagttgg
     1441 agcgccccgg tggctctttg tgaaatccaa gccatctcct tcgactggtt atcgtgtaaa
     1501 tataaaggtg ccaagattga gtggaacact tggttaacac aaccaagcac gtatctgtaa
//
LOCUS       XM_071832968             465 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842868), mRNA.
ACCESSION   XM_071832968
VERSION     XM_071832968.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..465
                     /gene="LOC139842868"
                     /note="uncharacterized LOC139842868; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842868"
     CDS             1..465
                     /gene="LOC139842868"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689069.1"
                     /db_xref="GeneID:139842868"
                     /translation="MLRNYLVPLKVELFIWRTRHKRLPTRVELDKCRIDLGTVRCPVC
                     DNGLESVDHSIILCSFAFDVWNRVFDWWNLGSFSNMSINEAFLGNGHTFTTDVGKQLW
                     QATEWVTSYSIWKNRNALIFTKAKPTSTMVFKEIQLKSYEWFSNRVKGFKIE"
     misc_feature    <19..183
                     /gene="LOC139842868"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcttcgta actaccttgt cccgctaaaa gtcgaactgt ttatttggcg cactcgtcac
       61 aaacggttac ctacgagagt cgaacttgat aagtgcagga tagatttggg tacggttcga
      121 tgtccggtct gtgacaacgg gcttgaatcg gtggatcact ccattatttt atgtagtttt
      181 gcttttgatg tgtggaatag agtttttgat tggtggaatc ttggttcttt ttcaaacatg
      241 agcataaatg aagcatttct cgggaatggt cacacgttta ccaccgatgt tggtaaacaa
      301 ttgtggcaag ctaccgaatg ggttacaagt tattcgattt ggaagaatag aaacgcttta
      361 atcttcacta aagctaaacc gacaagcact atggtcttta aagaaattca acttaaaagt
      421 tatgaatggt tctctaacag ggtaaaaggt ttcaaaatcg aatga
//
LOCUS       XM_071832970            1299 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842869), mRNA.
ACCESSION   XM_071832970
VERSION     XM_071832970.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1299
                     /gene="LOC139842869"
                     /note="uncharacterized LOC139842869; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842869"
     CDS             1..1299
                     /gene="LOC139842869"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689071.1"
                     /db_xref="GeneID:139842869"
                     /translation="MGFLVIIPGNIEDTVKMCEFTDELGQHNCFSPLRSGDLDLENPL
                     TPFCSPVKSFPMAQNNWIHDESPGPFSPKTTLDHKRNITKDQIGTRQGRKKIISLNIR
                     GVGVGKDCKLGWIKSLCRMEKPNFLALQETKISSVDLNWICNLWGNNNCNFIQKENIG
                     KFGGQLLIWDSSCFDVTNSFVSDFCVGIRGKWKSSGAEFNIVNVYGPHDDANKQKMWD
                     FLYNIISNNDSHAWVICGDFNEVRSKDERLNSLYLEYRAKKFNELIEKSNLFDVPLGG
                     RIFTRISDDGLKFSKLDRFLVNDAFQSLWCCIAAVALERKQSDHCPIILKDDEKNFGP
                     KPIKVFDDWLEIDGIDQIIKDVWVDDGGGGSRKDCCLRNKLKKTKLEIKAKSLVKFGN
                     LEGEIEMYKSIANSLEHKAELGQIDENERKQWLEARIEWF"
     misc_feature    286..978
                     /gene="LOC139842869"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(298..300,391..393,613..615,709..711,715..717,
                     877..879,955..960)
                     /gene="LOC139842869"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(391..393,955..957)
                     /gene="LOC139842869"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(613..615,715..717,958..960)
                     /gene="LOC139842869"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgggctttt tggtgataat cccggggaat attgaagata ctgtcaaaat gtgtgagttc
       61 acagacgaat tgggccaaca taattgtttc agtccattaa gaagtggtga tctagattta
      121 gaaaatcctc ttacaccatt ttgcagtcca gtaaagtctt tccctatggc ccaaaacaat
      181 tggatccatg atgaatctcc tgggccgttt tctcctaaaa caactctgga tcataaacgc
      241 aatatcacta aagatcaaat aggtacgagg caaggaagga aaaagatcat aagcctaaat
      301 atcagaggtg ttggggtggg aaaagattgt aaacttgggt ggattaaaag cctttgtcgt
      361 atggaaaagc caaatttcct ggctcttcaa gaaacaaaaa ttagttcggt tgatttaaat
      421 tggatatgta atctgtgggg caataataat tgcaatttta tacagaaaga aaatattggg
      481 aaattcgggg gtcaattatt gatatgggac tcctcctgtt ttgatgttac taattccttt
      541 gtgtctgatt tttgtgttgg tatccgagga aaatggaaat catccggtgc tgagttcaat
      601 atcgttaatg tctacgggcc ccacgacgat gcaaacaaac aaaagatgtg ggattttctc
      661 tacaacatca tttcaaataa tgatagtcat gcttgggtca tttgtggaga ctttaacgaa
      721 gttagaagta aagacgaaag gttgaattct ctatatctcg agtatagggc aaagaagttc
      781 aatgaattaa tcgaaaaatc caatttgttt gatgttcctc ttggcggtag aatttttact
      841 cgtataagtg atgatggtct taaatttagc aagcttgatc gcttcctcgt taatgatgct
      901 tttcaatctc tttggtgttg tattgccgcc gtggctcttg aaagaaaaca gtccgatcat
      961 tgccccatta ttttgaaaga tgatgaaaaa aatttcgggc caaaaccgat aaaagtcttt
     1021 gatgattggc tcgagattga tggtattgat caaattatta aggatgtgtg ggtcgatgat
     1081 ggtgggggtg gtagtagaaa agattgttgt ttgcgaaata agttgaagaa aacaaaactt
     1141 gagattaaag caaaaagcct tgtaaaattt ggaaatctag agggggaaat cgagatgtat
     1201 aagagtattg caaatagtct tgaacataaa gccgaattag gccaaatcga tgagaatgaa
     1261 aggaagcagt ggttagaagc aagaatagaa tggttctaa
//
LOCUS       XM_071832971             488 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842870), mRNA.
ACCESSION   XM_071832971
VERSION     XM_071832971.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..488
                     /gene="LOC139842870"
                     /note="uncharacterized LOC139842870; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842870"
     CDS             6..488
                     /gene="LOC139842870"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689072.1"
                     /db_xref="GeneID:139842870"
                     /translation="MRMKKVLTAEEIAGISFRKQDVNVQLEQEKASENVEQSPAASGN
                     KRKAAETSAAQQKKKKMTPKQREDMRNDNFVPIEPRSAELLPPITEHVEETQPSTPRV
                     NPDLQATATSKDKTIHVDSDSTPTPPQGSFRVANLSQLTQSSAENAAEQPAALPAYTS
                     "
ORIGIN      
        1 cagaaatgag gatgaagaag gtgctgactg cggaagagat tgcgggaatc tccttccgca
       61 agcaagatgt gaacgtacag ctagagcagg agaaagctag cgaaaacgtg gagcaatcgc
      121 cggcggcatc tggcaacaaa cgcaaagcag ctgagacctc tgcggctcag cagaagaaga
      181 agaagatgac tcccaaacaa agggaggaca tgcggaacga taactttgtt ccaatcgagc
      241 cacgctccgc agaactactt ccccccatta ctgagcatgt ggaggagacg cagccgtcca
      301 ccccgcgggt caacccagat ctccaagcta ccgccacatc aaaggataag acaatacacg
      361 tggattccga ttctacacca actcctccgc aaggtagctt ccgcgttgcc aacctcagcc
      421 aactcacaca gtcttccgcg gaaaatgccg cagagcagcc cgccgctctt ccagcatata
      481 ccagctag
//
LOCUS       XM_071832972            2145 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842871), mRNA.
ACCESSION   XM_071832972
VERSION     XM_071832972.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2145
                     /gene="LOC139842871"
                     /note="uncharacterized LOC139842871; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139842871"
     CDS             1..2145
                     /gene="LOC139842871"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689073.1"
                     /db_xref="GeneID:139842871"
                     /translation="MAMTEGVKEAKWLRGLVSDLGIRQDQTIVHCDNQSAIHLTKNQM
                     YHERAKHIDIRSKSQLASKGINAWKNLSHTLNSHENSSEHLINLKTWYELRLRLSTNQ
                     TIDKDLQELIKKDTKHWKDVLVRIIAVVKCLSQYNLPFRGTNEKLYENSNGNFLGILQ
                     MIGEFDPIMSEHLQRIQNKEIHYHYLSHKIQNELISMLAYEVKSAILKKIKEARYYSV
                     ILDCTPDVSHQEQMTLIIRCVDVSSSPIKVEEFFIEFLIVEDTTGLGLFKVLQDVLKS
                     LDLDIKYIRGQGYDNGSNMKGQHSGVQARLLEINRRAFYMPCGCHCLNLVLCDMANSC
                     NKAKTFFGTCQTLYNVFSSSTKRWSILLEYIDELTLKSLSVTRWESRVESVKAIKTQV
                     SQVKKALIKLKEVSNDAKVCRDAESLINGEFSSFEFVLSLVIWYEILFKINLVSKKLQ
                     SKDMLLDVAVKNLEGLIDYFKNYRENGLDNAINEAKQIAETVEIEPEFSVKRASYRKK
                     QFDEIPNTEREQQSAKDQFRTDYFIVLVDMALVQLNSRFKQMKNFESIFGFLFDASKL
                     AYLDIVKLKECCMNLESALTCDNDSDIDGNDLFMELKVLKDMLPKKAYEGERPWTSIQ
                     IMEFTKKMDLFPNILLAYKILLTVPVTVASAERSFSKLKLLKSYLRSTMSQERLNGLA
                     ILSIENKFLADIDYEKIIDDFASRNAQRQRFR"
     misc_feature    <1..>165
                     /gene="LOC139842871"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    184..903
                     /gene="LOC139842871"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    <1873..2064
                     /gene="LOC139842871"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggctatga cagagggtgt gaaagaagca aagtggctga ggggtttggt tagtgatctt
       61 ggtatacgac aagatcagac tattgtgcat tgtgataatc agagtgcgat acatttgact
      121 aaaaatcaaa tgtatcatga aagagccaag cacatagaca taagatcgaa aagtcagttg
      181 gcaagtaaag gaataaatgc ttggaaaaat ctttctcata ctttaaactc gcatgaaaat
      241 agttctgaac atttgattaa cttgaaaaca tggtatgagt tgcgtttgag gttaagtaca
      301 aatcaaacaa ttgataaaga cttacaagaa cttattaaaa aagatactaa acattggaaa
      361 gacgttttag ttagaataat cgctgttgtt aaatgtctat cacaatataa tttgccgttt
      421 cgtggaacaa atgaaaaact ttacgaaaat tctaatggaa actttttagg catacttcaa
      481 atgattggtg aatttgatcc tattatgagt gaacatttgc aaagaattca aaacaaagaa
      541 attcattatc attatctaag tcataaaatt caaaatgaat taattagcat gttagcatac
      601 gaagtaaaaa gtgcaatact taagaaaata aaagaggcaa ggtactattc agtaattctc
      661 gattgcacgc ctgatgtaag tcaccaagaa caaatgaccc taattattag atgcgttgat
      721 gtgtcgagtt ctcctattaa agtagaagag ttctttatag aatttttgat tgtagaagat
      781 acaacaggtt taggtctttt taaagtatta caagatgttt taaaatctct tgatttagat
      841 attaaatata ttagaggaca agggtacgat aatggatcta atatgaaggg acaacattca
      901 ggtgttcaag ctagattact tgaaataaac cgaagagctt tttatatgcc ttgtggttgt
      961 cattgtctta atttggtatt gtgtgatatg gcaaattctt gtaataaagc gaagactttt
     1021 tttggtacat gtcaaacact atataacgtc ttctctagtt ctacaaaacg gtggagtatt
     1081 ttacttgaat atattgatga actaacttta aaatcattat ctgttactcg gtgggaaagt
     1141 cgtgtagaga gtgttaaagc cataaaaact caagtttccc aagtaaaaaa agctttaata
     1201 aaattaaaag aggttagtaa tgatgcaaaa gtctgtagag atgccgaatc attgataaat
     1261 ggtgaatttt caagttttga atttgttttg agtttggtta tttggtatga aattttattt
     1321 aaaattaatt tagttagtaa gaagctacag tctaaagata tgcttcttga cgttgcagta
     1381 aaaaatttgg agggattgat tgattatttt aaaaattatc gggaaaatgg gttggacaac
     1441 gctattaatg aagctaaaca aattgcagaa actgttgaaa tagaacctga attttctgta
     1501 aaacgagcat cttataggaa aaaacaattt gatgagatcc caaatactga aagagaacaa
     1561 caatctgcta aagatcaatt tagaacagat tactttattg ttttagttga tatggctctt
     1621 gtacaattaa atagtagatt taaacaaatg aaaaattttg aatcaatttt tggttttttg
     1681 tttgacgcat caaaattagc ttatttagat attgtcaagt tgaaagaatg ttgtatgaat
     1741 cttgaatctg ctttgacatg tgataatgat tctgatatag atggaaatga cttgtttatg
     1801 gagttaaaag ttttgaagga catgttgcca aaaaaagcgt atgagggaga aagaccttgg
     1861 acatctattc aaattatgga gtttacgaag aaaatggatt tgtttcctaa catcttactt
     1921 gcatacaaga ttttgttaac cgtaccagtc acggtagcat cagcagaaag aagtttttca
     1981 aaattaaagt tattgaagtc ctatttacgg agtacaatga gtcaagagcg gctgaatgga
     2041 ttagcaattt tgagtattga gaataagttt ttagctgata ttgattatga aaaaataatt
     2101 gatgattttg cttcgagaaa tgctcaaagg cagcgtttta ggtga
//
LOCUS       XM_071832973             675 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842872), mRNA.
ACCESSION   XM_071832973
VERSION     XM_071832973.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..675
                     /gene="LOC139842872"
                     /note="uncharacterized LOC139842872; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842872"
     CDS             1..675
                     /gene="LOC139842872"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689074.1"
                     /db_xref="GeneID:139842872"
                     /translation="MCTISLNIRGLGQMGKITWLKRICNKEKPTILGLQETKSEQTQD
                     NIIESFWGNPDFKFVQKDSVGASGGIITIWDCNTFTFDHAIEGEFFLAICGSWVGYDT
                     KIAFINVYGPHSSSKKLRLWSELSSLVNSLTIPFIIFGDFNEVRKASERMNCEFNQQW
                     ATNFNNFINNFGLIDIPLGWKKFTRICIKRMKFSKLDRFLVSDDILKIWPNISSKTLD
                     RDLSDH"
     misc_feature    10..672
                     /gene="LOC139842872"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,106..108,328..330,421..423,427..429,589..591,
                     667..672)
                     /gene="LOC139842872"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(106..108,667..669)
                     /gene="LOC139842872"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(328..330,427..429,670..672)
                     /gene="LOC139842872"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtgtacga tatctcttaa cattcgggga cttgggcaaa tgggtaaaat tacatggctt
       61 aaacgaattt gcaacaaaga aaaaccgaca atacttggac ttcaagaaac taaaagtgaa
      121 caaacgcaag acaacatcat cgaatcattc tggggaaacc ccgacttcaa atttgtccaa
      181 aaagactcgg ttggtgcatc gggcggaatc atcacaatat gggactgtaa tactttcacc
      241 ttcgatcacg ctattgaagg tgaatttttc cttgcaattt gcggttcttg ggtgggttat
      301 gatactaaga ttgctttcat aaatgtctac ggcccacatt cctcgtccaa aaagctaaga
      361 ctttggtctg agttatcctc tctcgtaaac tctctcacga tccctttcat cattttcggt
      421 gacttcaacg aagtcaggaa agcttccgaa cgcatgaact gtgagtttaa tcaacaatgg
      481 gccactaact ttaataactt cattaacaac tttggactaa tagacatccc acttggctgg
      541 aaaaaattca ccagaatctg cattaaaaga atgaaattca gtaaactaga tagattcctc
      601 gtatctgatg acattttaaa aatatggcca aacatttcat ctaaaaccct cgatcgtgat
      661 ctctccgacc actga
//
LOCUS       XM_071832974             804 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842873), mRNA.
ACCESSION   XM_071832974
VERSION     XM_071832974.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..804
                     /gene="LOC139842873"
                     /note="uncharacterized LOC139842873; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842873"
     CDS             1..804
                     /gene="LOC139842873"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689075.1"
                     /db_xref="GeneID:139842873"
                     /translation="MLETNKDASIAERITHRNGLSYGNWSWTRDPTSRATNEITELNS
                     IVSSVSLSDKQDSWKYNLDSTGIFTTKSLASLINSLRFGNNALSLSTPRNKLLPQKVY
                     IFIWRAIQNKIPVRFEIDKRGIDLDSTLCPLCELEVETTEHILCSCPNSALLWKLVLD
                     WWAQDVSLISNLNEAIINNQPFAHNIPGSSIWQATKWITCYIIWKHRNLKVFSKKTWS
                     PASILSEIQTQSFSWISKRSYKKKTIEWHQWLINPSFFVADTTHRVGIG"
     misc_feature    <280..447
                     /gene="LOC139842873"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcttgaaa caaacaaaga tgcctcgatc gctgaaagaa ttacacaccg caatggactt
       61 tcttacggta actggagctg gacaagggac ccaactagtc gggccacaaa cgaaatcaca
      121 gaattaaata gcatagtatc ttctgtttcg ttatccgata aacaagattc ctggaaatac
      181 aatttagact ccacagggat attcactacc aagtccttgg catctctgat caactccctt
      241 cggtttggta ataacgcgtt aagcttgtca acgccccgta acaaactcct accgcaaaaa
      301 gtatatatct ttatatggag agccatacaa aacaagatcc cggtcagatt tgaaatagac
      361 aaaaggggca ttgatctcga ttccacttta tgccctttgt gcgaattgga agttgaaacc
      421 accgaacata tcctgtgttc gtgccccaat tcggcactct tatggaaact tgttcttgat
      481 tggtgggccc aagatgtttc tctaatatcc aatcttaacg aagccatcat caacaatcag
      541 ccattcgctc acaacatccc cggatcctca atttggcaag caaccaaatg gattacatgc
      601 tacataatct ggaaacatag gaatttgaaa gttttctcca aaaaaacgtg gtccccggcc
      661 tcgatcttat ctgaaataca aacacaaagt tttagctgga tttccaaaag atcttacaaa
      721 aagaaaacaa tcgagtggca ccaatggcta atcaacccct ccttctttgt cgcggatacc
      781 acacaccgtg ttgggattgg ctaa
//
LOCUS       XM_071832975            1394 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842874), mRNA.
ACCESSION   XM_071832975
VERSION     XM_071832975.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 44% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1394
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1394
                     /gene="LOC139842874"
                     /note="uncharacterized LOC139842874; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842874"
     CDS             1..1296
                     /gene="LOC139842874"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689076.1"
                     /db_xref="GeneID:139842874"
                     /translation="MAQEEHTSRCSNSSSGGPGGGGVGGSNGGGGSSNHRSSKKLKHK
                     KVPQRGMGVAQLEKIISEEQQKKDVNVLTPNLFTTSSNSGSNMATTPKVPNFRQQPSV
                     SSCSIPLPPPLPPNHQPLVSNKSDNSGSVLKPANSTSGGGNWCRLWNDSDYSFNGEKH
                     NQNQNQNQNQNYRLDHSRYTGATLSPNLGGVPYESSAPIWPPAPNLMLQRPQLFQQPI
                     SSPMVNVSAATSSSSVANFQIEPPSNQNHSGSNFQPLWLEEEKVVGMKRPYPFSLENV
                     PVPPFHCKFPPISRSDELASFSNGGTSTTIEPAYPVFRDTSSSSVVRPDTTKKSFVNE
                     NEVLTRDFLKLAPPQALQLNSSSKETLHLSSCITEQTHYEILPPHNGQSKDSTRLTGI
                     GGSNPQSFLSFFPAAKTPMVQPGTSNGEAGESVDLNLKL"
ORIGIN      
        1 atggctcaag aagaacatac ctctaggtgt agtaatagta gtagcggcgg ccctggtggc
       61 ggtggtgttg gcggcagtaa cggtggtggt ggtagtagta atcataggtc atccaagaag
      121 ttgaaacaca aaaaggtccc acaaagaggt atgggtgtgg ctcaacttga aaagattata
      181 tctgaagaac aacaaaaaaa agatgtaaat gttttgacac caaatttatt tactacttct
      241 agtaattcgg gttcgaatat ggctactacc ccaaaagttc caaactttag gcagcagcca
      301 tcagtttctt catgttcaat tccattgcca ccacctttgc caccaaatca tcaacctttg
      361 gtttcaaaca aatctgataa ttctggctct gttttgaaac cagcgaattc gactagtggt
      421 ggtggtaatt ggtgtagatt atggaatgat agtgattata gttttaatgg tgaaaaacat
      481 aatcagaatc agaatcagaa tcagaatcaa aattatcggt tggaccactc tagatacaca
      541 ggtgcaacct tatcaccaaa tcttggtggt gtgccatacg aatccagcgc accgatatgg
      601 cctcctgcac ctaatctaat gctgcaaaga ccacaacttt ttcaacaacc tatttcttca
      661 ccaatggtga atgtttcagc agcaacttca tcatcttctg ttgcgaattt tcagatcgag
      721 cccccttcaa accaaaacca ttcaggcagt aacttccagc cattgtggct agaggaagaa
      781 aaggtggttg gcatgaaaag gccataccct ttttcgttag aaaatgtgcc ggttccacct
      841 tttcactgca agtttccgcc catttcaaga tcagacgaat tagcttcttt tagcaatggc
      901 ggtactagta ctactatcga gcctgcatat ccagttttca gagatacttc ttcaagctca
      961 gtcgtcagac ccgatactac aaaaaaaagt ttcgtcaatg aaaacgaagt tctgactcga
     1021 gattttctca agttagcacc tcctcaagca ttgcagctga attcgagttc gaaagagaca
     1081 ttgcatcttt catcttgtat aacagaacag acccattatg aaattttacc acctcataat
     1141 ggtcaatcaa aagattcaac ccgtttgact ggaataggcg ggtcaaaccc gcagtccttt
     1201 cttagtttct ttccagctgc gaaaacgcca atggtgcagc caggaaccag caatggtgaa
     1261 gcaggggaaa gtgttgatct aaatttaaag ctatagaagg ctctctttat ttattgatgt
     1321 cttctttata ttaagttggc aaggtagctc tatttttagt tatctgcaag tgatcatgtt
     1381 agaaatgtga tatt
//
LOCUS       XM_071832976            1101 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842876), mRNA.
ACCESSION   XM_071832976
VERSION     XM_071832976.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1101
                     /gene="LOC139842876"
                     /note="uncharacterized LOC139842876; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842876"
     CDS             1..1101
                     /gene="LOC139842876"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689077.1"
                     /db_xref="GeneID:139842876"
                     /translation="MYDGTVRTLTDVRHVPELRKNLISLGTLDSIGCNYRARGGVIVK
                     AKHYHGVLIVSKGALVVMKGERCNGLYLLKGSTVTGAAGVSSSAKDVDTMKLWYMHLG
                     HMSERGMMELSKRGLLCGQNIGRLEFCEHYVFGKQSRIKFRTAVHRTKVNRSPSTATD
                     CQTPLDKWSGSPASYSDLKIFGCPAYAHVKDGKLELRAKRCIFLGDVTFDESAVLKKT
                     EEKQVVAGKDREVEEQVEQEIEVPQGVVQDTPVEPVVEDVHDLGVDHMTPEYQSDEQH
                     DLQNYNLVRDRERRVIKPPQQFGHGDLVAYALSMAEDIEVQEPATYREAISGPESANW
                     SVAMNEEMESLYKNHTWELVKPPKDQKIVGCK"
     misc_feature    205..411
                     /gene="LOC139842876"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
ORIGIN      
        1 atgtatgatg gcacggtgag gactttgaca gatgtcaggc atgttccaga attgagaaag
       61 aatcttattt ccttgggtac gttggactcc atcggctgca attatcgagc tcgaggtgga
      121 gtgatagtta aagctaagca ttatcatgga gtattaatag tctcaaaagg tgcacttgtt
      181 gtgatgaaag gtgaaaggtg taatggcctt tacctgttaa agggtagcac ggttactggt
      241 gcggctggag tttcttcatc ggctaaagat gtagatacca tgaagttatg gtacatgcat
      301 cttgggcaca tgagcgagag aggaatgatg gaacttagta aacgaggttt gctgtgcggt
      361 cagaatatcg gaagattgga attctgcgag cactatgtat tcggaaaaca gagccgaata
      421 aagtttcgca cagccgttca caggacgaaa gtaaatcggt ctccatcaac ggcaactgat
      481 tgtcaaactc ctttggataa atggtcaggt tcccctgcaa gttatagtga tttgaaaatt
      541 tttggttgtc ctgcttatgc tcatgtgaaa gatggtaaac ttgagctgag ggctaagaga
      601 tgcatatttc taggggatgt gacatttgat gagtctgctg tgttgaaaaa gacagaggag
      661 aaacaagtag ttgctggaaa agatcgtgaa gttgaagagc aggtggagca agaaatagaa
      721 gttccacaag gagtagtaca agatactcct gtcgagcccg ttgtagaaga cgtacatgac
      781 ttaggtgttg atcatatgac accagaatat cagtcagatg aacaacatga tctacagaat
      841 tataatctag taagagatag agaacgacga gtaataaaac caccacaaca gttcgggcat
      901 ggagatttgg tagcttatgc cctgagtatg gcagaagata tagaggtcca agaacctgct
      961 acatatcgtg aagctataag tggcccagaa tctgcaaatt ggtctgtagc tatgaatgaa
     1021 gagatggagt ctctttataa gaatcatacg tgggagctgg tgaaaccgcc taaagatcag
     1081 aagattgttg gatgcaaatg a
//
LOCUS       XM_071832977             339 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139842877), mRNA.
ACCESSION   XM_071832977
VERSION     XM_071832977.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..339
                     /gene="LOC139842877"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139842877"
     CDS             1..339
                     /gene="LOC139842877"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071689078.1"
                     /db_xref="GeneID:139842877"
                     /translation="MVCTRPDIAQAVSVVSRYMDCPGKAHWKAVQWIMRYLIGTTDIG
                     LVFDSSGNTNVTGYINSDFAGDLDRRRSQTRYVFTLGRCAISWKATLQSTVALSTTEA
                     EYMAMTEGVK"
     misc_feature    166..>336
                     /gene="LOC139842877"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggtatgta ctagaccgga tattgcacag gcggtaagcg tggtgagtag atatatggat
       61 tgtccaggga aagctcattg gaaagcggtg caatggatta tgcggtacct catagggaca
      121 acagatattg gcttagtatt tgatagcagt ggtaatacta atgttaccgg atacattaat
      181 tcagactttg ctggtgattt ggatcggaga aggtctcaga cgagatatgt ttttactctc
      241 ggaagatgtg ctattagttg gaaagcaaca ttacaatcga cagttgcttt gtcgacaact
      301 gaagcggaat acatggctat gactgagggt gtgaaataa
//
LOCUS       XM_071832978            2124 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides sodium/calcium exchanger
            NCL2-like (LOC139842878), mRNA.
ACCESSION   XM_071832978
VERSION     XM_071832978.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2124
                     /gene="LOC139842878"
                     /note="sodium/calcium exchanger NCL2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842878"
     CDS             1..2124
                     /gene="LOC139842878"
                     /codon_start=1
                     /product="sodium/calcium exchanger NCL2-like"
                     /protein_id="XP_071689079.1"
                     /db_xref="GeneID:139842878"
                     /translation="MIKLTRKINLNVLFLVIVLFAKAAGRVLRYSDSVLISDGTDDPN
                     PQNRLSFLQVKGVNSPEERCDQMYGFLPCSESLVGHLFLIVVYEYLLYNGESYVASGG
                     KRIFKILGPGIFGASAFHVLGFLPESIILLLSGLSNSKEVAQEYVLTGVGLLAGSTIL
                     ILTLLWGTCVIVGSRKFSSEPSSSFSLTPTQNAYDKIISVLKESGVTTDQETSFAANI
                     MLLSVLPFTFLLIPEIFGINSSHGYIFVIALPVSIMFLLVYFVYQVFEPSIQKRRLSY
                     IKHEHLVVDILKHLQEHTAEKLLTEDGSANVSAIQSFFTKIDQDGDSYISFSELKELL
                     HDIKFKQLSWNKEKTMEDIMKEFDKDADSKVSMEEFVDRFTKWLDETKGAVDNRPYRS
                     ISSWKDLYQIVQPWVQTKKKEQEMMKILISEIIRHVQVFPLRNFYNENGEANISVIKG
                     LFKRLDLDKDNCVSQSELKKLIMEVNSEKIPWNVDEATDKIMQDLDKSGDKRIDEQEF
                     IDGFKEWLNTSNGDIIPSSPGSETGSSQQKPWERWVDDGVDKSIWAWTKAIMVLVVGI
                     AMLALLAEPLIHSVQKVSSGANIPSFFIAFILVPLATNARVAVSAIQTVNQKKEITTS
                     LTFSELYHGVFMNNVLGFSVLLAVIYFRGLSWDFSGEVLAVLMVCIVVGTVSSFQSKF
                     PIWTAFIAYLLYPSSLIFVYIFNKL"
     misc_feature    928..1545
                     /gene="LOC139842878"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; Region: FRQ1; COG5126"
                     /db_xref="CDD:444056"
     misc_feature    928..1125
                     /gene="LOC139842878"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     Region: EFh; cd00051"
                     /db_xref="CDD:238008"
     misc_feature    order(952..954,958..960,964..966,985..987,1072..1074,
                     1078..1080,1084..1086,1105..1107)
                     /gene="LOC139842878"
                     /note="Ca2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238008"
     misc_feature    1669..2106
                     /gene="LOC139842878"
                     /note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
                     pfam01699"
                     /db_xref="CDD:426387"
ORIGIN      
        1 atgataaagc ttacaagaaa aataaacctg aatgttctgt ttcttgttat tgtgttattc
       61 gcgaaggctg caggccgtgt tcttcgttat agtgactcag tattaatttc agatggcacc
      121 gatgacccaa atccacagaa cagactgtct tttctgcaag taaaaggagt taattcccct
      181 gaagagcgtt gtgatcaaat gtacggtttc ttgccatgtt cagaatcgct cgtgggtcat
      241 ctgtttctta ttgtagttta cgagtacttg ttatataatg gagaatcgta tgttgcttct
      301 ggtggtaaac ggatattcaa aattcttggt ccggggatat tcggtgcaag cgcttttcat
      361 gtccttggat tccttcctga atcaataata cttctcttat ctggactttc gaatagtaaa
      421 gaggtagctc aagagtatgt cctaacagga gttggtttgc tagccggatc aacgatacta
      481 attctaacgt tactttgggg aacttgtgtc atcgtcggaa gtcgaaagtt ttcatctgaa
      541 ccgagttcaa gtttttcttt gactcctaca caaaatgcat acgataaaat tatttcggtt
      601 ttgaaggagt caggtgtaac tacggatcaa gaaacaagtt ttgcagccaa tattatgctg
      661 ctttcagttt tgccgttcac atttctcctg atcccagaaa tattcgggat aaattcatct
      721 catggataca tttttgtaat tgctcttcct gtttccatca tgttcttgct cgtatatttc
      781 gtttatcagg tgtttgagcc ttcgatccaa aaacgaagat tatcatacat taaacacgag
      841 catttagtag tggacatact aaaacatctt caggaacaca ccgcagaaaa actactcacc
      901 gaagatggtt cagcaaacgt atcagctata caaagtttct ttacaaaaat tgatcaagat
      961 ggggatagct acatatcctt ttcagaactc aaggaactac tccatgatat taagttcaag
     1021 caattgagtt ggaacaagga gaaaacgatg gaagacataa tgaaagaatt tgataaagat
     1081 gccgatagta aagtatccat ggaggagttt gtcgataggt tcacaaaatg gctcgatgag
     1141 acaaagggtg cggtggataa tcgaccatat cgctcaatta gctcatggaa ggacttatat
     1201 caaattgtcc aaccatgggt ccagacgaaa aagaaagaac aagaaatgat gaagatcctg
     1261 atatctgaaa ttattcgaca tgttcaagtc tttccgttaa gaaacttcta caacgaaaat
     1321 ggggaagcaa atatatctgt tattaaaggg ttgtttaaaa ggcttgacct tgataaagat
     1381 aactgtgtat cacaatctga gctgaagaaa ctgatcatgg aagttaattc tgagaagata
     1441 ccatggaatg tagatgaagc aacagataaa ataatgcaag atcttgacaa aagtggagat
     1501 aagagaatcg atgaacaaga atttatagat ggatttaagg aatggctcaa cacgtctaat
     1561 ggtgacatca ttcccagctc acctgggtct gaaactggtt catcccagca gaaaccatgg
     1621 gaaagatggg tagatgatgg ggtagataaa tcaatttggg catggacaaa ggctataatg
     1681 gtattggtgg ttggtatagc aatgttagcc cttctggctg aacctctgat acacagtgtt
     1741 caaaaggttt ctagtggtgc aaacatacca tcattcttca tcgcttttat cttggttccg
     1801 ttggctacaa acgctagagt agcagtttcg gccatccaaa ctgtaaacca aaagaaggaa
     1861 ataactactt ctttgacttt ctctgagtta taccacggtg tgttcatgaa caatgttctt
     1921 ggattttcag ttcttttagc ggtcatatat tttcgaggct tatcatggga tttctctggt
     1981 gaagtgttgg ccgtgttaat ggtttgtatc gttgttggaa cggtatctag ttttcaatca
     2041 aagttcccca tttggacagc attcatagca tacctcctct atccctcatc tttgatcttt
     2101 gtttacattt ttaataaact ataa
//
LOCUS       XM_071832979             348 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cysteine proteinase
            inhibitor 5-like (LOC139842879), mRNA.
ACCESSION   XM_071832979
VERSION     XM_071832979.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..348
                     /gene="LOC139842879"
                     /note="cysteine proteinase inhibitor 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins"
                     /db_xref="GeneID:139842879"
     CDS             1..348
                     /gene="LOC139842879"
                     /codon_start=1
                     /product="cysteine proteinase inhibitor 5-like"
                     /protein_id="XP_071689080.1"
                     /db_xref="GeneID:139842879"
                     /translation="MAYWYIILSLFVNLLVGKCLAESSQKTVGNWLEIARLDDPAVLE
                     VGQFAVNAYNTNTTSTFRFQRVVRGDTQIVGGINWRLTVEVEDFDLFRNCEVFVYDQP
                     WRHVKELKSFKIV"
     misc_feature    order(85..87,214..222,226..228)
                     /gene="LOC139842879"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     misc_feature    100..339
                     /gene="LOC139842879"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; Region: CY; cl09238"
                     /db_xref="CDD:447698"
ORIGIN      
        1 atggcgtatt ggtatattat tctctctctt tttgtcaact tattagttgg taaatgtttg
       61 gccgaaagta gccaaaagac ggtcggaaac tggttggaga ttgcgcgtct agatgatccg
      121 gcagtgctag aagtcggaca gtttgcggtt aatgcataca acacaaatac aacttctacg
      181 tttaggttcc aaagagtagt tagaggtgac acccagattg ttggtggcat aaattggcgt
      241 ctaacagttg aggttgaaga tttcgattta ttcaggaact gtgaggtttt tgtttacgat
      301 caaccatggc ggcacgttaa agaactcaaa tcctttaaaa tcgtttga
//
LOCUS       XM_071832980            2916 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842880), mRNA.
ACCESSION   XM_071832980
VERSION     XM_071832980.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2916
                     /gene="LOC139842880"
                     /note="uncharacterized LOC139842880; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842880"
     CDS             1..2916
                     /gene="LOC139842880"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689081.1"
                     /db_xref="GeneID:139842880"
                     /translation="MWFGDDYDAFGDNNQLNEVSSLGIKSNAFVAQNLYDQWLSLPET
                     ATLFKVTFSSTFYLTRLTSRTKELTKAITTVDAVKIGQFNVNVSCWSEPATKFLGGHI
                     QGTCRTRYDISNLMLDNTLSYDHVRSCPPSLGAGSFRGVGGGSRVATPGKIRVGSWNV
                     GTLTGKRIELVDIFLKCKVEIVCVQETRWKGQEAVDFNNYRLWYSGSRTARNGGGILL
                     GPTHKDHVVDVGRFSDRIMSVTFIINEETFTVISAYAPHVGLGEAEKKSFWELLDEVV
                     RGCPADHRLIIGGDLNGHIGAEVEGYRGAHGGFGYGVRNEEGRSILEFAIAHDLVVAN
                     SFFKKRDAQLATFHSGGHSTQIDFFLLRRGDLRNCKDCKVLPTWTCSSQHRLLVMELG
                     TQGRVNRRAREVQPPKILWKNLNGEKAETFRANVVERMGAELENAAFIDADQMWNNLA
                     STIRGVAKESLGVAVGTSRAQNGCRESWWLNDEVQTKVALKQARFRELTSFRGGTLAD
                     RTSIENSYKEAKRKAKIAVTRAKDKAYEDLYKRLDSKEGANDIYRIAKVRERRRRDLD
                     NIKYIKDEAGQSIVKEDKIRKRWEEYFSSLFDGGRTRNGEPHVYDMAPQYQNNCFCTR
                     INHGEVRVALRKMGRNKAVGPDQIPIEAWRCLGDDGVRWLTNLFNMTFRSAKMPMEWR
                     LSEVIPIYKNKGDAQTCSNYRGIKLLSHTMKLWERVIETRLRRETKVSENQFGFMPGR
                     SSMEGAKTRVRMTVGYTEFFPVEVGLHQGSALSPFLFALVLDDLSHRIQGSIPWCLIF
                     ADDIVLVSESQDELNRRLEQWRNALEQNGLRISRLKSEYLRCDYGRIEDHNDTVDIRI
                     GDQVLHPQDSFRYLRSMLHKSGRTDDDVSHRIRVGWLKWRAVKGVLKNLEVGNIVNKM
                     REGRLRWFGHVRRWPPTAPVRRVEALTVGGVRRRVTSLNGFHGSAGRRSLGSSLSAL"
     misc_feature    463..1173
                     /gene="LOC139842880"
                     /note="Endonuclease domain (L1-EN) of the non-LTR
                     retrotransposon LINE-1 (L1), and related domains; Region:
                     L1-EN; cd09076"
                     /db_xref="CDD:197310"
     misc_feature    order(475..477,556..558,760..762,868..870,874..876,
                     1069..1071,1147..1152)
                     /gene="LOC139842880"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     misc_feature    order(556..558,1147..1149)
                     /gene="LOC139842880"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197310"
     misc_feature    order(760..762,874..876,1150..1152)
                     /gene="LOC139842880"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197310"
     misc_feature    2050..2610
                     /gene="LOC139842880"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    2305..2307
                     /gene="LOC139842880"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
ORIGIN      
        1 atgtggtttg gtgatgatta tgatgcattt ggtgataata atcagctgaa tgaagtatca
       61 tctttgggta tcaagtcaaa tgcttttgtt gctcagaatc tgtatgatca atggctttcg
      121 ctacccgaaa ccgctacttt gttcaaggtg acattctcat ccacatttta tttgacaagg
      181 ctaacatctc gaacaaaaga attgacgaag gctatcacta ctgttgatgc tgttaaaatt
      241 ggacagttta atgttaacgt gagttgctgg agcgaacctg caacaaaatt tttaggtggg
      301 cacatacagg gcacttgcag aacccgttat gatatcagca acctgatgtt agacaacaca
      361 ctttcgtatg atcacgtgag gtcatgtcct cctagtttag gggcgggtag ctttagaggg
      421 gttggaggag ggagtagagt agcaacccca ggtaagatta gagtgggaag ttggaatgta
      481 ggaactttga cgggcaagag gattgagctt gtggatatct ttcttaagtg taaggtggaa
      541 atagtgtgcg ttcaagagac tagatggaag ggacaggagg cggtggactt taataactac
      601 aggttgtggt actcgggctc taggacagct cgaaatggag gaggaatcct tttaggtcca
      661 acacacaagg atcatgttgt tgatgtgggt aggtttagcg ataggattat gtcggttacg
      721 tttataatta atgaggagac gttcacggtc attagcgctt acgcacccca cgtaggttta
      781 ggagaagcgg agaagaagag tttctgggaa ttgttagatg aggttgtaag gggatgtcca
      841 gcggaccatc gattgattat agggggcgat cttaatggtc atataggagc ggaggtagag
      901 ggatataggg gagcccatgg gggctttggg tatggggtta gaaatgaaga agggcgctca
      961 attctcgagt tcgccattgc ccatgatctg gttgttgcaa actctttctt caagaagagg
     1021 gatgctcagc tagccacctt tcatagtggg ggtcatagta cccaaattga ctttttcctt
     1081 cttcgcaggg gtgaccttag gaactgtaag gactgtaagg tcctcccaac ctggacttgt
     1141 tcatcccagc atagactgtt ggtcatggag ttaggtaccc agggacgggt aaacaggagg
     1201 gcgagagaag tacaaccacc caaaatcctc tggaagaact taaatggaga gaaggcggag
     1261 acttttaggg ctaatgttgt tgaaagaatg ggtgctgaat tggaaaatgc agcctttatt
     1321 gatgcagatc agatgtggaa caacctagcg tccactatta gaggggtggc aaaagaatcc
     1381 ttgggagtgg cagttgggac gtcgagagcc caaaatggtt gtagagaatc atggtggctt
     1441 aacgacgagg tccaaactaa agtcgcgctt aaacaagcga ggtttcggga gctcacctcc
     1501 tttagagggg gtacactagc agacagaact agcatagaaa atagctataa agaagccaag
     1561 agaaaagcaa agatcgccgt tacacgtgca aaagataaag cttacgaaga cttatataag
     1621 agactagact ctaaagaagg ggcaaacgac atctacagga tagccaaagt tagggagcgt
     1681 cggcgaaggg atctggataa catcaaatat atcaaggatg aagcaggtca aagcatagtg
     1741 aaggaagaca aaattaggaa acgatgggaa gaatacttct catccctttt cgatggggga
     1801 aggactagga atggagaacc tcatgtctat gatatggccc cacaatatca aaacaactgt
     1861 ttctgcacga ggatcaacca tggggaagtt agagtggccc tacgcaagat ggggagaaac
     1921 aaagcagtag gaccggacca aatccccata gaggcgtggc ggtgcctagg cgatgatggg
     1981 gttaggtggt tgacaaacct tttcaacatg acgtttagaa gcgcaaaaat gccaatggag
     2041 tggagactga gcgaggttat tcccatttac aagaacaaag gggatgcaca gacgtgtagt
     2101 aactatagag gtataaagtt acttagccat accatgaaac tatgggagag agtgattgag
     2161 actaggctta gacgagagac aaaggtgtca gagaatcaat ttgggttcat gccaggacgc
     2221 tcctcgatgg agggggcgaa aactcgcgtt cggatgacag taggatacac agagtttttc
     2281 ccagtagaag taggtttaca tcaaggatct gctcttagcc cttttctttt cgctttagtc
     2341 ttagacgacc tgtcccatag gatacaaggg agtatccctt ggtgcttgat ttttgccgat
     2401 gatattgtct tagtatcgga atcccaggat gagctaaaca gaaggctgga gcaatggagg
     2461 aatgccctgg aacaaaatgg acttcggatt agtagactta aatcggagta tcttagatgc
     2521 gactacggga ggatcgaaga tcacaatgat actgtggata ttcgtattgg ggatcaggtc
     2581 ttacatccac aggattcctt tagatactta agatcgatgc tacacaaatc gggaaggaca
     2641 gatgatgatg tgtctcaccg tataagagta ggatggctga agtggagagc tgtgaaaggg
     2701 gttttaaaga acttagaagt tgggaatatc gtcaacaaga tgagagaagg acgacttaga
     2761 tggtttggcc atgtaaggag gtggccaccc acagcaccgg tcaggagagt ggaagccctc
     2821 acggttggcg gcgtaaggag aagagttact tcacttaacg gatttcatgg ttctgctggc
     2881 cggaggtcct tgggaagcag cctctctgcc ctatag
//
LOCUS       XM_071832981            1189 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides large ribosomal subunit
            protein uL18-like (LOC139842881), mRNA.
ACCESSION   XM_071832981
VERSION     XM_071832981.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1189
                     /gene="LOC139842881"
                     /note="large ribosomal subunit protein uL18-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 Proteins"
                     /db_xref="GeneID:139842881"
     CDS             56..970
                     /gene="LOC139842881"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL18-like"
                     /protein_id="XP_071689082.1"
                     /db_xref="GeneID:139842881"
                     /translation="MVFVKAQKSRSYFKRFQVKFKRRREGKTDYRARVRLINQDKNKY
                     NTPKYRYVVRFTNKDIVAQVISATIAGDMVLASAYAHELPQYGLKVGLTNYAAAYCTG
                     LLLARRVLKKLEMDEEYQGNVEATGEDFSVEPAESRRPFRALLDVGLLRTTTGNRVFG
                     ALKGALDGGLDIPHSEKRFAGYNKDGKSLDAEVHRKYIYGGHVAAYMNMLMEDEPEKY
                     QSQFSDYIKAGVEPDSLEELYKKVHAAIRADPNPKKPEKKEPKEHKRYNLKKLTYDER
                     KQKLIERLNALNAAAGANDDDDSDEDDE"
     misc_feature    56..889
                     /gene="LOC139842881"
                     /note="60S ribosomal protein L5; Provisional; Region:
                     PTZ00069"
                     /db_xref="CDD:240254"
     polyA_site      1189
                     /gene="LOC139842881"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcggctcata acctctacta cacctcacac cgcagcacag agccgccgat tagcgatggt
       61 gtttgtcaaa gcccagaagt caagatctta cttcaagagg tttcaagtca agttcaagcg
      121 aaggagagag ggcaagactg attaccgtgc cagagtccgt ttgattaatc aggataaaaa
      181 caagtacaac acgcccaagt accgatatgt tgtgcgattt accaacaagg atatagttgc
      241 acaagtcata tcagcaacca ttgctgggga catggttctt gcttcagctt atgctcatga
      301 gcttcctcag tatggtctca aagttgggct cacaaactat gctgcagctt attgtactgg
      361 gcttttattg gctcgccgag tgcttaagaa gcttgaaatg gatgaggagt accagggtaa
      421 tgttgaggca actggagaag atttttctgt tgagccagca gaaagccgta ggccatttcg
      481 tgctcttctt gatgtcggtc tactcagaac taccactgga aaccgtgttt ttggtgcact
      541 taagggtgct ttagatggtg ggctcgacat cccgcacagc gagaagaggt ttgctggtta
      601 taacaaggat ggtaagagcc ttgatgctga agttcaccgc aagtacatct acggtggcca
      661 tgttgcagca tacatgaaca tgttaatgga agatgaacca gagaagtacc agtctcaatt
      721 ctcggactac atcaaggctg gggttgaacc agatagtctc gaagagcttt acaaaaaggt
      781 ccatgctgct attcgtgctg atcctaaccc taagaagcca gagaagaagg aacccaagga
      841 acataagaga tacaacctca agaagcttac ctacgacgaa aggaagcaaa agcttattga
      901 gaggttaaat gcattgaacg ctgccgcagg agcgaacgat gatgatgatt cagacgaaga
      961 tgacgagtga gcaacgatgc atgttttcat ttttgtcatg tttttgggtt cacaagtctt
     1021 gaaagtttgt tttattttgt ttagaagaat ctgataccag aattgtcttc aacatattga
     1081 ggaatgttat gttaaatgta atgtttgaac ttgattttgt tcttttgaaa tgatggtagt
     1141 tactcttcac cacctattta tgctacggaa ttgtcctgta ctgttatta
//
LOCUS       XM_071832982            2085 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842882), mRNA.
ACCESSION   XM_071832982
VERSION     XM_071832982.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2085
                     /gene="LOC139842882"
                     /note="uncharacterized LOC139842882; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842882"
     CDS             1..1845
                     /gene="LOC139842882"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689083.1"
                     /db_xref="GeneID:139842882"
                     /translation="MEFDENEQEDINNKPKTTKSNRNKIDDNEDESLNKQNTRGIILS
                     VTKPSYTLKGGIGSDLRSIRCEHRNRLRYLLRQLVRRQNWSEASGVLSVLLKGTHRDN
                     GFSTNRSKYWAALEILNHMAADKVKPRKMQQVYEIWMKKSYAITKNKRLAKGRFDVQL
                     EYLLFCIAQGDNDGAYQAMISLQQESDFASDPIANLLVGLSFSHLWYNAIQKEMHLDD
                     SSESSTSFQSVSGMSAPPEPIISVDLSIRQSAVEVQVSNSSQPDSNTSVRIGKPFDPE
                     EVFDRDRVVPMAVDRVMKKEVLEYDESVESDQSGNPSQFPHTGSKRYGSIFYARDLET
                     LLMPIRFPGTNTFEDFISFQKRIQNDHYKAAVKHLRAALHLEAFEALLPLIQMLLVGD
                     QVKEAIEEVESVVQNSHASLPFRLRASLLEHFSNEDVSKMCACFEDTLNKDPTCRHSL
                     LKLINLHYDGRYSIEKLVEMIAKHLEASYPDCHIWKEFASCFIKLSHCDEDRMSSCVG
                     DSCTKRSANVPDMFKDDEVSDNWRLRCRWWQTRHFTQTRLTSEIASGNMELVGYKAAS
                     ACHLYGPEFTYVVKAYAYLKEEKNQFRPILKMHMENAIGLKDKIYNYN"
     misc_feature    229..1746
                     /gene="LOC139842882"
                     /note="TAF RNA Polymerase I subunit A; Region: TAF1_subA;
                     pfam14929"
                     /db_xref="CDD:434323"
ORIGIN      
        1 atggaattcg atgaaaacga acaagaagac atcaacaaca aacctaaaac tacaaaatca
       61 aaccgaaata aaattgacga taacgaagat gagtcattga ataagcaaaa cactagagga
      121 attatattat ctgttacgaa gccttcttat actttaaaag ggggtatagg tagcgattta
      181 cgtagtatac ggtgtgagca ccggaataga ctccggtacc ttctccggca acttgtccgt
      241 cgacagaatt ggagtgaagc ttccggcgtg ttgagcgtgt tgttgaaagg aacgcataga
      301 gataacgggt tttcaaccaa tcggagtaaa tattgggctg cattggagat tctgaatcat
      361 atggctgctg acaaagttaa accaagaaaa atgcaacagg tttatgaaat atggatgaaa
      421 aaaagttacg cgattacaaa aaataagcgg ttggcaaagg gtaggtttga tgtgcagtta
      481 gaataccttc ttttctgtat tgcacaaggt gacaatgatg gtgcatacca ggctatgatc
      541 agccttcagc aagaaagtga ctttgcgagt gaccctatcg caaatttatt ggtggggctc
      601 tctttttctc atctatggta caatgctata caaaaagaaa tgcatttaga cgattcatcc
      661 gagtcaagta catcgtttca gtcagtgtca ggtatgtcgg cgccgcctga accgatcata
      721 tccgttgatc tctctattcg acaaagtgct gttgaagttc aagtttccaa ttcttctcaa
      781 cccgattcaa acacctctgt tagaattggt aaaccgtttg atcctgaaga agtttttgat
      841 cgagatcgag tagttccaat ggcggttgac cgtgttatga agaaagaagt acttgaatat
      901 gacgaatccg ttgagagtga tcaaagtggc aacccgtccc agtttcctca tactggcagc
      961 aaacgatatg gttctatatt ttatgctcgt gatctagaaa cattgttgat gcctataaga
     1021 tttcctggca caaatacgtt tgaggatttc atctcttttc aaaagagaat acagaacgat
     1081 cattataagg ctgcagtgaa gcatttacgg gctgctcttc atctagaagc ttttgaagct
     1141 ttactacctc taattcagat gcttttggtt ggggatcaag ttaaggaagc tatagaagaa
     1201 gtggaaagtg ttgtacaaaa ctctcacgcc tcacttcctt ttagattaag agctagtctt
     1261 ctggaacatt tttcaaacga ggatgtaagc aaaatgtgcg cctgctttga agacacttta
     1321 aataaggatc caacttgtag acactcactg ttaaagctaa tcaacttgca ctatgatggg
     1381 cgttacagca tagaaaaact ggtagaaatg attgctaagc atttggaggc ttcatatccg
     1441 gactgtcata tatggaaaga atttgcttct tgctttataa agctttctca ctgtgatgaa
     1501 gatagaatgt cgagttgtgt tggtgatagc tgcacaaagc gttctgctaa tgttcctgac
     1561 atgtttaaag atgatgaagt aagtgataac tggagattac gttgtcgatg gtggcagaca
     1621 cgtcatttta cccaaacaag gcttacatca gaaattgcgt cagggaatat ggagcttgtg
     1681 ggttacaaag cggcctcggc ctgccatctt tatggtccgg aattcacgta cgttgtgaag
     1741 gcttatgcat acttgaagga agaaaaaaat caattcaggc caatcttgaa aatgcacatg
     1801 gagaacgcta ttggattaaa agacaaaata tataattata attgatagta atagataata
     1861 gaattggagg ttttcttggc cgaatttgaa tacgccggcc ttgtctccat cattcttttg
     1921 gctgcaactg cggtgccttc taatagctgg ttcatctatt tatatttttt gttaagttta
     1981 gcggtttaat atcgggtatg acccttttac tactttgctt agatccgtca gttttgctgt
     2041 ttgatgggtt tatttatgcg agtggtcgtg taatgacaaa agcag
//
LOCUS       XM_071832983             762 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842883), mRNA.
ACCESSION   XM_071832983
VERSION     XM_071832983.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..762
                     /gene="LOC139842883"
                     /note="uncharacterized LOC139842883; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842883"
     CDS             1..762
                     /gene="LOC139842883"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689084.1"
                     /db_xref="GeneID:139842883"
                     /translation="MDKEVKLETRIIKNDPSNLFCWKWIRPPTGRTLSELNRLCDLLN
                     GFSYENGETDKWAWNLHPSETFYTSVLTKLLDEKILPNANMSFETARLHLLPQKIGIL
                     IWRVMQERIPVRVELDKRGVDMDSVRCPVCDDDIETAEHTFLHCEFAKDIWSRIFRWW
                     GSNRHMYSCLGDMFKGDIGGSKSKLWQSIEWVCGYHIWRNRNLTLFQRKRGNGPMALN
                     EVQIKSFEWISKRVRKCSFEWSQWLINPSSYDDQV"
     misc_feature    <283..456
                     /gene="LOC139842883"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggacaagg aggtcaagct tgaaactaga attatcaaaa acgatccaag taatctcttc
       61 tgctggaagt ggatacgccc cccaactggg cgaacactat ccgaacttaa cagattgtgc
      121 gacttgctaa atggtttttc ttatgaaaat ggtgaaacgg acaaatgggc atggaacttg
      181 catcctagcg agacgtttta cacctctgtt ctaaccaaat tgctcgacga aaagattctg
      241 ccaaacgcga atatgtcatt tgagacagca aggttgcatc tacttccaca aaaaatagga
      301 atcttgattt ggcgggtcat gcaagaaaga attccggtta gagttgagct agacaaacgt
      361 ggggttgata tggactcggt tagatgtccg gtatgcgacg atgatatcga gacggctgaa
      421 cacactttct tgcattgtga gttcgcaaag gatatttgga gtcgaatctt tagatggtgg
      481 ggatctaatc ggcatatgta ctcgtgtctg ggggatatgt tcaagggtga tattggtggt
      541 tccaaatcca agttgtggca atctatcgaa tgggtttgcg ggtatcatat atggagaaat
      601 cgaaatctta ccttattcca acgaaaaaga gggaatggtc cgatggcttt aaacgaggtt
      661 caaataaaat cgttcgagtg gatttccaaa agagtgagaa agtgttcttt cgaatggagt
      721 caatggctta ttaacccgag ttcttacgat gatcaagttt aa
//
LOCUS       XM_071832984            1857 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842884), mRNA.
ACCESSION   XM_071832984
VERSION     XM_071832984.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1857
                     /gene="LOC139842884"
                     /note="uncharacterized LOC139842884; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842884"
     CDS             1..1857
                     /gene="LOC139842884"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689085.1"
                     /db_xref="GeneID:139842884"
                     /translation="MRISSKSILSPGRAGVRDPPNSLSTSVSRRLRNSGSIKGGASPA
                     MFPTTAKKRGSFENPEPSSPKVTCIGQVRVKSKKKQAKKLRTLSRRHSTGEVSFRKLD
                     HPLNGFPSNNQNLKESLNLGSKGSHNQCYNQSQNQDHESCSRSWVHFPVTICDALRAF
                     GSEFSCLFPCRKEEKMVAAEDNGRQGSCGAVFARWLVSVHDGNGGGERDIELVVGDEE
                     EEDESFVRKTRRHVFEDLEIVNDRIEGHVDEARVSICIPPKNALLLMRCRSDPVRIEA
                     LTNKSWEPSFDKNDEEIVDLEDFKESHEDFEVGQQQVLNFNQDQENVRQVEANQSHKC
                     ENVQEIDVVQDQKVENVQGIELGQAQELENMQENEVIPQVQEHQNVLAENEAGQLQDH
                     KEIEDEEEESLYLYSLFEEVLDQDYDTQEQDDSTMVTSLAKMFETPEEEMVNESKEGD
                     NEALEKESETVLPQCLLMMMYEPKLSMEVSRETWVCSTDFKRHSSKRKPPPAPVIAPV
                     KPDGGDESSVSGGGNVNDEMRVSDGGLPAVLLQPGRSSCSLPAAPSMAAVLGQKLADA
                     VGYEPFVLTRCKSEPMKTAAAKLLPESCVWENRKVERLSRVTFGFGSTRLGF"
ORIGIN      
        1 atgaggatct catctaaatc aattttgagc ccgggtcgag ccggagtccg ggacccacca
       61 aactcactct caacctcagt tagccggagg cttagaaaca gtggcagcat taaaggcggc
      121 gcttcgccgg cgatgtttcc aaccactgct aaaaaaagag gcagttttga aaacccagaa
      181 ccatcttcac ctaaagttac ttgcattggt caagtgagag ttaaaagcaa gaaaaagcaa
      241 gcaaaaaagc ttcgaacttt atcaagaaga catagcacag gtgaggttag tttcaggaaa
      301 ttagatcacc cacttaatgg gtttccttca aataatcaaa atcttaaaga aagtttgaat
      361 cttgggtcaa agggtagtca caatcaatgt tataatcaaa gtcaaaatca agatcatgaa
      421 tcttgttcaa ggagttgggt tcattttccg gtaactattt gtgatgcttt aagagcattt
      481 ggatctgaat tcagttgttt gtttccttgt cggaaagaag agaaaatggt ggcagctgaa
      541 gataatggcc gtcaaggttc ttgtggtgcg gtgtttgcac ggtggttggt gtcggtacat
      601 gatggaaatg gtggtggtga aagagacatt gagttagttg ttggagatga agaggaagaa
      661 gatgaaagtt ttgttaggaa aacaagaaga catgtgtttg aagatctaga gattgtaaat
      721 gatagaattg aagggcatgt agatgaagca agagtcagca tttgtattcc acccaaaaat
      781 gctttgttgt taatgagatg tagatctgac cctgtgagaa ttgaggcttt gactaataaa
      841 tcttgggaac caagttttga taaaaatgat gaagaaattg ttgatcttga agatttcaag
      901 gaatcccatg aagattttga agtggggcag cagcaagttc tgaactttaa tcaagatcaa
      961 gaaaatgtta gacaagttga agctaatcaa tcccataaat gtgaaaatgt gcaagaaatt
     1021 gatgtggttc aagatcaaaa agttgaaaat gtgcaaggaa ttgaattggg tcaagctcaa
     1081 gaacttgaaa atatgcaaga aaatgaagtg attcctcaag ttcaagaaca tcaaaatgtg
     1141 cttgctgaaa atgaagcggg tcaattgcaa gatcataaag aaattgaaga tgaagaagaa
     1201 gaaagtttgt atctttattc attatttgaa gaagttttag atcaagatta tgatactcaa
     1261 gaacaggatg actcaacaat ggtcactagt ttagccaaga tgtttgaaac cccggaagag
     1321 gaaatggtca acgagtcaaa ggaaggtgac aatgaagcat tagaaaaaga aagtgaaaca
     1381 gtgttaccgc agtgtttatt gatgatgatg tatgagccca aattatcaat ggaggtatca
     1441 agggagacat gggtttgcag tacggatttc aaacgccatt ccagtaaaag aaagcctccg
     1501 ccagcgccgg taatagcgcc ggtcaaacct gacggcggag atgagtcaag tgtaagtggt
     1561 ggtggtaatg ttaatgatga gatgagggtg tccgacggtg ggttgccggc ggtgttactg
     1621 cagccggggc ggtcatcgtg ttcattaccg gcggcaccat cgatggcggc ggtgttgggg
     1681 cagaagttgg cggatgcagt gggttacgag ccgtttgtgt tgaccaggtg taagtcggag
     1741 ccgatgaaaa cggcggcggc taagctatta ccggagagtt gtgtttggga aaataggaag
     1801 gtggagcggc tgagccgagt tacatttggt ttcggctcaa ctagattagg gttttga
//
LOCUS       XM_071832985             774 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842885), mRNA.
ACCESSION   XM_071832985
VERSION     XM_071832985.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..774
                     /gene="LOC139842885"
                     /note="uncharacterized LOC139842885; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842885"
     CDS             1..774
                     /gene="LOC139842885"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689086.1"
                     /db_xref="GeneID:139842885"
                     /translation="MSLVYGLGVNKIEVEGMANRVNCKAGELPFTYLGLPIGRNMNRI
                     ENWSPVLEKFSSKLAEWKARTGDKSKLIWIKWDDTLLPYGEGGLNIGSLRGKNLSLLG
                     KWFWRAQCEPNALWVSVIKSIHGFNGILPSSGLNNLKGKGGVWANILRAGTSIDKLGI
                     DFRAPLKERYKRLFFLESNQQVNVKDRVQWSEVRCIFSWNWVRALTGCASSDMQQLLF
                     EISSYAKEDTSRDKWVWSLASNGIFTTKKLSKLIDEQLF"
ORIGIN      
        1 atgagccttg tctacgggtt aggcgtgaat aaaattgaag tggagggcat ggctaatcga
       61 gttaattgta aagctgggga gctacctttc acctatcttg gcctccctat aggccgaaat
      121 atgaatagga ttgaaaattg gagtccggta ttagaaaagt ttagctcgaa gcttgcggag
      181 tggaaagcta gaactggtga taaatctaaa ctaatttgga taaaatggga cgacactctt
      241 ctaccttacg gtgaaggggg tctaaacatc gggagtcttc ggggtaaaaa tctttcatta
      301 ttggggaaat ggttttggcg ggcgcaatgt gaacctaatg ctctgtgggt ttcggtcata
      361 aaaagcattc acgggtttaa tgggatactc ccctcttcgg gtctaaacaa cctgaaggga
      421 aagggtggcg tttgggctaa cattctacgt gcaggaactt ccattgacaa gctaggtatc
      481 gacttcaggg cgcctttaaa agagagatac aagcggttgt tttttctaga gtcaaatcaa
      541 caggttaatg tcaaagatcg agtgcaatgg tcagaagtaa gatgcatctt ctcttggaat
      601 tgggttcgag ctcttacagg ttgtgcttca tctgatatgc aacagctact ttttgaaatt
      661 tcaagttacg ctaaggagga tactagcagg gataaatggg tttggagttt ggcttctaat
      721 ggtattttca ctacaaagaa actctctaaa ctcatagacg agcaattgtt ctag
//
LOCUS       XM_071832986             949 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides homeobox-leucine zipper
            protein ATHB-52-like (LOC139842886), mRNA.
ACCESSION   XM_071832986
VERSION     XM_071832986.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..949
                     /gene="LOC139842886"
                     /note="homeobox-leucine zipper protein ATHB-52-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139842886"
     CDS             1..819
                     /gene="LOC139842886"
                     /codon_start=1
                     /product="homeobox-leucine zipper protein ATHB-52-like"
                     /protein_id="XP_071689087.1"
                     /db_xref="GeneID:139842886"
                     /translation="MDEVLEGGLLGGYCHGCGGGGLGSRRWWVVLEGGDGGIAVVEEW
                     YTMVVCFVGCREKEENRTIGHFFRFCRRELLSAKQSYNFSIMHPSTFHNQKSPHIHIT
                     KRLTKDQVTLLESCFESNKKLDPKRKQQLSQQLGIPPRQIAIWYQNKRARWKNQSMEH
                     DYNMLQLQLEATLIENTHLEKEVEQLRAELNKVQTEQTRNSKYYNNGHQHQVDSNSLS
                     RCGEEVGSSSRSLEDDVNNFYCYGQQVFEVEEMYAAACMMSSDLGVIDSTKNYF"
     misc_feature    214..555
                     /gene="LOC139842886"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]; Region: COG5576"
                     /db_xref="CDD:227863"
     misc_feature    310..465
                     /gene="LOC139842886"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      
        1 atggatgagg tgttagaggg tggtctcctc ggtggttatt gccatggttg tggtggcggt
       61 ggtttgggtt caagaaggtg gtgggttgtt ttggagggag gcgatggtgg tattgcggtg
      121 gtagaagaat ggtacacgat ggttgtttgt tttgtgggtt gtcgagagaa ggaagaaaac
      181 agaaccattg gtcacttttt tcgtttttgt cgtcgtgagc ttttatcagc aaaacaatca
      241 tacaatttct caatcatgca tccctcaact ttccataacc aaaaatcccc tcatatacac
      301 attaccaaga gactaactaa agatcaagta acattgttgg agtcgtgttt tgaatccaac
      361 aaaaaacttg atccgaagcg aaaacaacag ctttcgcaac agcttgggat ccctccaaga
      421 cagatagcca tctggtacca aaacaaacgg gccagatgga agaaccagag catggagcat
      481 gactacaaca tgctccaact tcaattggag gcaacattaa ttgaaaatac acaccttgag
      541 aaagaagttg aacaactaag agcagagcta aataaggtac aaacggaaca aacaagaaac
      601 agtaagtatt acaacaatgg tcatcaacat caagtggatt ctaattcgct atctagatgc
      661 ggtgaagaag ttggaagttc atcaagaagc ttggaagatg atgtgaacaa tttttattgt
      721 tacgggcaac aagtttttga agtcgaggag atgtatgctg cggcttgtat gatgagttct
      781 gatttgggag ttatagattc gacaaaaaac tatttttaga catatcttaa agtttacgga
      841 atttgtttga tattactgaa ttcagtttaa gaatgcgatg tttcagtttc gaatactttc
      901 tgttttatgt atcttcacta gtacttgggc acgtacgaag tagttaatg
//
LOCUS       XM_071832987            2012 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides pentatricopeptide
            repeat-containing protein ELI1, chloroplastic-like (LOC139842887),
            mRNA.
ACCESSION   XM_071832987
VERSION     XM_071832987.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2012
                     /gene="LOC139842887"
                     /note="pentatricopeptide repeat-containing protein ELI1,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:139842887"
     CDS             1..1869
                     /gene="LOC139842887"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     ELI1, chloroplastic-like"
                     /protein_id="XP_071689088.1"
                     /db_xref="GeneID:139842887"
                     /translation="MLSASFSTTAVTGPTINHQPLHSPETLALLIINSKTIRQLTQIH
                     AAAIRHELDNHPTVNFKLQRSYSSFNRLHSSLTLFNRTHDPNVYYYTSIIHSHAVHNL
                     YYKGIKLYIQMISNNIEPNEFTFSAVLKGCPLQPGKLIHDHVVKLGFESNMHVRTALV
                     DVYSNGGDLVYARQLFDKMPERSLVSLTSMITGYAKHGELVKARALFDEMVERDVVCW
                     NVMIGGYVKYGKPNEALTLFREMLRIKMKVNEVTLVTILSACGQIGALESGRWIQSYI
                     EINGMNMNVHLGTALIDMYSKCGSLEDARIVFNKLKNKDVIAYNSMITGYAMHGLSQE
                     ALLLFKNMCTMRLRPTDISFIGVLNACAHSGLVAIGKGVFLLMKTKYGIEPTIEHYGC
                     MVNLLGRAGYLEQAYELVKNMKVHPDPVIWGTLLDSCALYKNVALAEEIVKFLVDYKL
                     ANSGTYILLSNLYAAISNWAGVARMRTMMKDHGVQKEPGCSSIEVHNKVHEFVAGDMK
                     HPNSEQIYMMLEEVNGWLEGHGYAPQTDIVLHDVGKKERARSLEVHSEKLAIAFGLIS
                     TEPGSSIKIVKNLRVCLDCHEVTKLISKITKRTIVVRDRNRFHHFVNGLCSCGDYW"
     misc_feature    <124..1860
                     /gene="LOC139842887"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    265..348
                     /gene="LOC139842887"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    469..546
                     /gene="LOC139842887"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    550..639
                     /gene="LOC139842887"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    643..729
                     /gene="LOC139842887"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    748..942
                     /gene="LOC139842887"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    952..1035
                     /gene="LOC139842887"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1051..1140
                     /gene="LOC139842887"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1159..1242
                     /gene="LOC139842887"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 atgttatcag cttccttctc aacaaccgcc gtcaccggtc ccaccataaa ccatcagcct
       61 cttcactctc cggaaacact agcattgctg atcataaact ccaaaaccat caggcaactc
      121 acccaaatcc acgcagctgc catccgccat gaacttgata accacccaac tgtgaacttc
      181 aaacttcaac gctcatattc ttcatttaac cgtcttcatt catctcttac tcttttcaac
      241 cggacacatg atcccaacgt gtattattac acttcaatta ttcactctca cgctgtccat
      301 aatctttatt ataaaggaat taaattatac atacaaatga tatcgaataa tattgaaccg
      361 aatgagttta cgttttcagc tgttttaaaa gggtgtccgt tacaacccgg gaaattaatt
      421 catgatcatg tggttaaact cgggtttgaa tccaatatgc acgtgaggac agctttagtg
      481 gatgtttact caaatggtgg ggatttggta tatgcacgcc aactgtttga taaaatgcct
      541 gagagaagtt tggtttcgtt gacgtccatg ataacggggt atgctaagca tggggagctc
      601 gtgaaagcac gagcgttgtt tgatgaaatg gttgagagag atgtggtttg ttggaatgtg
      661 atgattggtg ggtatgttaa gtacggtaaa ccgaatgaag ctttgacgct ttttagggaa
      721 atgttacgga taaagatgaa ggttaacgaa gttacactgg ttacaattct ctctgcgtgt
      781 ggacagattg gggcgttgga atcagggaga tggattcaat cgtatataga aatcaatgga
      841 atgaacatga atgttcattt aggcactgct ttaattgata tgtatagcaa atgtggtagc
      901 ttagaagatg ctcgaatagt ctttaataag cttaagaata aagacgttat tgcttacaat
      961 tcaatgatta ctgggtacgc tatgcatggt ctttctcaag aagcattgtt gttgtttaag
     1021 aacatgtgta cgatgcgcct acggcctaca gatatctcat tcattggagt cttgaatgca
     1081 tgtgctcatt caggtttagt tgctatagga aagggtgtat ttctgttaat gaaaactaaa
     1141 tacggaattg aaccaacaat tgagcattat gggtgtatgg ttaaccttct tggtcgagcc
     1201 ggttatcttg aacaagcgta tgagcttgta aaaaacatga aggttcaccc tgatccggtc
     1261 atatggggga ctttacttga ctcatgtgca ctttataaaa acgttgcttt agcagaagag
     1321 attgttaagt ttttggtaga ttataaactt gcaaattcag gaacatacat tcttctttct
     1381 aacttatatg ctgcaatctc aaactgggct ggagttgccc gaatgaggac aatgatgaag
     1441 gaccatgggg tgcaaaaaga gcccggttgt agctcaattg aagtacataa caaggtgcat
     1501 gagtttgttg caggggacat gaaacaccca aatagtgaac aaatttatat gatgttggag
     1561 gaggtgaatg gatggcttga aggtcatggt tacgctccac aaactgatat tgtgctacat
     1621 gatgttggga agaaagaaag agcgcgatct ttagaagtgc atagtgagaa acttgctatt
     1681 gcatttgggc ttattagtac tgagcctgga agtagtataa agattgtgaa gaatttgagg
     1741 gtttgtttgg attgtcatga agtaacgaag ttgatctcaa agatcactaa acgaacaata
     1801 gtcgttagag atcgaaatcg gtttcatcat tttgtaaatg ggctgtgttc ttgtggggat
     1861 tattggtgat ttagaaactt gtacaaagac ttgtcataaa ctcaaaactc tacacatttt
     1921 gtattattaa gccttttaac aacatggtgg ttggattatt tgtttaatat aatctagaga
     1981 taacctagag ataaatgaag atcaagctaa aa
//
LOCUS       XM_071832989            1257 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842889), mRNA.
ACCESSION   XM_071832989
VERSION     XM_071832989.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1257
                     /gene="LOC139842889"
                     /note="uncharacterized LOC139842889; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842889"
     CDS             1..1257
                     /gene="LOC139842889"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689090.1"
                     /db_xref="GeneID:139842889"
                     /translation="MQSLNGKLASLSRFVSKGAEKQLPFFRILKGCLGKKKIVWNKEA
                     ERAFVEMKKYIAKLPTLTSPEEGDTLFIYLVASKECISAVLVTKREKTQVPIYFVSRV
                     LQGVELNYPELEKLTLALVHTARKLRRYFQAHQIVVLNNKPIRQVLSKPEKSGRMAKW
                     AIELGEHDIEFRVRHAIKGKVLADFIAETDSVNEEDTKNSTQVISLKIENEEWKLYTD
                     GASSSDGSGAGLMLVNSEGKEFTYALRFEFDTTNNEAEYEAQLAGLRMAKELKILHLR
                     AFVNSQLVSNQIKGTFEAKQPTIQQYLSKAKELIEGFKSFDIEHVRRSQNKKADALSK
                     LASLTFEHLAKEVLVEVLEKKSILEEEVNDLIQEDEVTWMTPLQVYLEIGKLPVDKNE
                     ARKIRIKAPSYKMMNGALYRRSFLTP"
     misc_feature    199..498
                     /gene="LOC139842889"
                     /note="RNase H-like domain found in reverse transcriptase;
                     Region: RT_RNaseH; pfam17917"
                     /db_xref="CDD:465565"
     misc_feature    637..1011
                     /gene="LOC139842889"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(652..663,751..759,766..768,838..840,958..960,
                     1000..1002)
                     /gene="LOC139842889"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atgcagagcc tgaatgggaa gctagcgtca cttagcagat tcgtatcaaa gggagcagag
       61 aaacaactac ccttcttcag aattctgaag ggatgcttgg gaaaaaagaa aattgtctgg
      121 aacaaagaag cggagagggc attcgttgaa atgaagaaat acatcgccaa actccctacc
      181 ttaacctcac ccgaagaagg agatacactc ttcatatact tggttgcttc gaaagaatgc
      241 atcagcgcag tattggtcac caaacgagag aaaacgcaag taccaatata cttcgtcagc
      301 cgagtacttc aaggagtcga gctgaattat ccagaactcg agaaactcac tctagcgctc
      361 gtccatacag ctaggaaact ccgaagatac ttccaagcac atcagatagt ggtacttaat
      421 aacaaaccaa tcaggcaagt gctctcgaaa cctgaaaaat cggggagaat ggccaaatgg
      481 gccattgagt taggagagca tgacattgag ttccgggtca ggcatgcaat caaaggaaaa
      541 gttctagcag atttcatcgc cgaaacagat agtgtaaatg aagaagacac gaagaactca
      601 acccaagtta tctccctaaa gatcgaaaat gaagagtgga aattgtacac cgatggtgcg
      661 tcaagctccg atggatcagg tgctggtcta atgttagtaa attccgaagg aaaagagttc
      721 acttatgcac ttcgtttcga attcgataca accaataacg aagcagagta cgaagctcag
      781 ctagcaggat tgagaatggc gaaggaatta aaaatccttc atctccgagc cttcgttaac
      841 tcacagctag tgtctaacca gatcaagggc acatttgaag caaagcaacc caccatccaa
      901 caatacttgt caaaagcaaa agaactgatc gaaggcttca aaagttttga tatcgagcat
      961 gtccgaagaa gtcaaaataa gaaggcagat gcactgagca aacttgcttc gctgacattt
     1021 gagcacctcg caaaagaagt cttggtggag gtgctagaga agaaatcaat cttagaggaa
     1081 gaagtcaatg acctcataca agaagacgag gtaacatgga tgactccgct acaggtatat
     1141 cttgagatag gaaaattacc agtggataaa aatgaagcaa ggaagataag gataaaggca
     1201 ccttcgtaca aaatgatgaa cggagcgcta taccgaagat cctttctcac cccatag
//
LOCUS       XM_071832990            2439 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides dynamin-related protein
            5A-like (LOC139842891), mRNA.
ACCESSION   XM_071832990
VERSION     XM_071832990.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2439
                     /gene="LOC139842891"
                     /note="dynamin-related protein 5A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139842891"
     CDS             1..2439
                     /gene="LOC139842891"
                     /codon_start=1
                     /product="dynamin-related protein 5A-like"
                     /protein_id="XP_071689091.1"
                     /db_xref="GeneID:139842891"
                     /translation="MAASDTLMKTPINDKISSSSSSISRKHQTTSSKSRFEAFNRLQS
                     AAVAFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMIHDPT
                     ALDPRCRFQEEDSEEYGSPIVLSTAIADTIKSRTDALLKKTKTAVSSKPIVMRAEYAH
                     CPNLTIIDTPGFVLKAKKGEPDTTPEEILSMVKSLASPPHRILVFLQQSSVEWCSSLW
                     LDVIRDIDPTFRRTLIVVSKFDNRLKEFTERWEVDRYLSASGYLGDNTHPFFVALPKE
                     RTTVSNDEFRTQISQVDTDVIHHLRENVKGGYDEEKYKSHIGFGRLRDYLEAELQRRY
                     KEAAPATLALLEQRCSEVTSQLSTMDSKIQATSDVAHLRRSSMLFASSICNHVVALMD
                     GAADPDPEQWGKTTIEEKSESGTLSWPGVTVDIKPPNATLRLYGGAAFERVMHEFRCA
                     AYSVECPPVSREKVANIILAHAGRGGGRGIAEAAAEIARAAAKSWLAPLLDTACERLA
                     FVLRNLFDLAMEKNQHHHFDYGTKTGDMDGYVGFHAALRRSYNCFIRDLTKQCKQLVR
                     HHLDAVTSPYSLVCYETDLAFSTGANFTYRYQASTTSLCLDLSDHGSSLCNADQENII
                     PENNNNNINNNRETTPGKLLKATGEASMTIPETPSPDQPCDGNFVIKKDNGNFIEGGA
                     RKCVTRMHNNKVLGNLVGQNFAGGDIGSRLGSTYTEICSSAAQHFARIREVLIERSVT
                     SALNSGFLTPCRERLMLSLGLDLFGVNDEKFMDMFVAPGAIDILQNERQSLQKRQKML
                     HSCLTEFKSVARSL"
     misc_feature    157..1017
                     /gene="LOC139842891"
                     /note="Dynamin_like protein family includes dynamins and
                     Mx proteins; Region: DLP_1; cd08771"
                     /db_xref="CDD:206738"
     misc_feature    184..207
                     /gene="LOC139842891"
                     /note="G1 box; other site"
                     /db_xref="CDD:206738"
     misc_feature    order(187..189,193..210,247..252,265..267,502..504,
                     712..714,718..723,817..831,838..840)
                     /gene="LOC139842891"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206738"
     misc_feature    order(190..195,514..516,553..555,628..630,634..636,
                     640..651,655..660,721..723,727..738,826..834)
                     /gene="LOC139842891"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:206738"
     misc_feature    265..267
                     /gene="LOC139842891"
                     /note="G2 box; other site"
                     /db_xref="CDD:206738"
     misc_feature    277..285
                     /gene="LOC139842891"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206738"
     misc_feature    502..513
                     /gene="LOC139842891"
                     /note="G3 box; other site"
                     /db_xref="CDD:206738"
     misc_feature    order(508..513,601..606)
                     /gene="LOC139842891"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206738"
     misc_feature    709..720
                     /gene="LOC139842891"
                     /note="G4 box; other site"
                     /db_xref="CDD:206738"
     misc_feature    817..825
                     /gene="LOC139842891"
                     /note="G5 box; other site"
                     /db_xref="CDD:206738"
ORIGIN      
        1 atggcggctt ctgatacact aatgaaaacg ccaatcaacg ataagatctc atcatcttca
       61 tcttccattt cacgaaaaca ccaaaccact tcctcaaagt ctcggttcga agccttcaac
      121 cgcctacagt ctgccgcagt tgcattcggc gaaaagcttc cgattcctga gatcgtagca
      181 attggtggac agtctgatgg aaagagctcg cttctcgaag ccttacttgg attccgattc
      241 aatgttcgcg aagtcgaaat gggaactcgt agaccactta ttctgcagat gattcatgat
      301 cctaccgctc tcgatcctcg gtgtcgattt caggaggaag attctgagga gtatggaagc
      361 cctattgtgt tatcaacagc aattgcagac actattaaat cacgaacgga tgcgttgctt
      421 aagaagacta aaacagcagt ctcttctaag ccgattgtta tgagagctga atatgcacat
      481 tgtcctaatc tcaccattat cgatacccca ggtttcgttc tcaaggctaa gaagggggaa
      541 ccggatacca ctccagaaga aattttgtca atggtgaaat ctttggctag tccacctcat
      601 cgtatccttg tgtttcttca acaaagtagt gtggagtggt gctcgtcgct gtggttggat
      661 gttattcgtg atattgatcc aacttttcgt agaacattga ttgttgtctc aaaatttgat
      721 aaccggctta aggaatttac tgaacgatgg gaggttgacc gttatctaag tgcaagtggc
      781 taccttggag acaatacaca cccatttttt gtggccttac ctaaggaaag gactacagtt
      841 tcaaatgatg aatttcgcac gcaaatatca caagtagata cagatgttat acatcatctg
      901 cgagagaatg tcaaaggtgg ttatgatgaa gaaaaatata aatcccacat tggttttggc
      961 cgtcttcgag attatttaga agctgaactt caaaggagat ataaagaagc tgcacctgca
     1021 acactggctt tgcttgaaca gcgttgcagt gaagttactt ctcaactaag caccatggac
     1081 tccaaaatac aagcaacttc tgatgttgct caccttcgaa gatcttcaat gttgtttgca
     1141 tcttccatct gcaaccacgt ggtagcattg atggatggag ctgcagatcc tgaccctgaa
     1201 caatggggga aaacaactat agaggagaaa tctgaaagtg gtacgctgag ctggccggga
     1261 gtaacagttg atataaaacc accgaatgct acccttcggc tatatggtgg tgctgctttt
     1321 gaaagagtga tgcatgaatt tcgatgtgct gcttattcag ttgaatgccc tcctgtttca
     1381 agggagaagg tggcaaatat aatacttgct catgctggtc gaggaggtgg aaggggaatt
     1441 gcagaggctg ctgcagagat tgcacgtgct gctgcaaaat cgtggcttgc tcctcttctt
     1501 gatactgctt gtgaaagact tgcatttgta ttaagaaacc tgtttgatct tgccatggag
     1561 aaaaatcaac atcaccattt tgattatgga acgaaaactg gggatatgga tgggtatgtc
     1621 ggttttcatg ctgctttaag gcgttcgtac aattgtttca tcagggatct aaccaaacaa
     1681 tgcaagcaac ttgttcgaca ccatttggat gcagttacaa gcccatattc tctagtatgc
     1741 tatgagactg atcttgcatt cagtactggt gcaaacttta cttacagata tcaagcatca
     1801 actacctctt tatgccttga cttatcagat cacgggtcat cattgtgtaa cgcagaccaa
     1861 gaaaatataa ttcccgaaaa taataataat aatattaata ataatcgaga aacaacacca
     1921 ggaaagcttt taaaagcaac aggggaagct tcgatgacta ttcctgaaac accatcaccc
     1981 gaccaaccat gtgatggaaa ttttgtcatt aaaaaggata atggaaattt cattgaaggc
     2041 ggagcaagaa aatgtgtcac tagaatgcat aataataaag tgctgggcaa tttagtaggt
     2101 caaaattttg caggcgggga tattggttca cgattagggt cgacttatac agagatatgc
     2161 tcatctgctg cacaacattt tgcacgtata cgagaagttt tgatcgagcg gagtgtcact
     2221 tcagctttga attcagggtt tctaacccca tgccgtgaac gtctgatgct ttcactggga
     2281 cttgatttgt ttggtgtaaa tgatgagaag tttatggata tgtttgtggc acctggcgca
     2341 attgatatcc ttcaaaatga acgccagtct cttcaaaagc gccagaagat gttacactct
     2401 tgcttgactg aattcaagtc tgttgcaaga tcactttag
//
LOCUS       XM_071832991             582 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842892), mRNA.
ACCESSION   XM_071832991
VERSION     XM_071832991.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..582
                     /gene="LOC139842892"
                     /note="uncharacterized LOC139842892; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842892"
     CDS             1..582
                     /gene="LOC139842892"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689092.1"
                     /db_xref="GeneID:139842892"
                     /translation="MSSSDEESLVNAMKSIFAYRNNVVIRREVEEQNEAQSTRRKRRY
                     IRRDRVETHNRILSYSTHPDAPKWFTYFQQRPDARGVLGVSTILKVTSAIRQLAYGDS
                     PNLFDEYLQISKRTSRESLQNFTRCIIDLYGNVYMREPTEDDIRRLYHKHEELHGFPG
                     MLGSIDCMHWAWRKCPNAWKGCDNPENFQLNLN"
     misc_feature    406..>543
                     /gene="LOC139842892"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagtagtt ccgacgaaga aagtttggtg aacgcaatga aaagtatatt tgcttatcga
       61 aataacgtgg taatacgtag agaggtcgag gaacaaaatg aggctcaaag cacaagacga
      121 aaacgtcgct acattcgtcg tgatcgtgta gaaacgcaca atcgtatact ttcttactct
      181 actcatcccg atgcaccaaa gtggtttact tattttcaac aacgtcctga tgcacgtggt
      241 gttctcggag tatctactat tttaaaagtc acttctgcca ttcgtcaact agcatacggt
      301 gattcaccga atctatttga cgaatattta caaatttcaa agagaacatc acgtgagtct
      361 ttgcaaaatt ttacaagatg tattatagac ttgtatggta atgtatacat gagagaaccg
      421 accgaggacg atatacgtcg gttgtatcat aaacatgaag aacttcacgg ctttcctgga
      481 atgcttggaa gcattgattg tatgcattgg gcttggagaa aatgtccaaa tgcatggaaa
      541 gggtgtgata acccggaaaa ttttcaatta aatttaaact ga
//
LOCUS       XM_071832992             657 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842895), mRNA.
ACCESSION   XM_071832992
VERSION     XM_071832992.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..657
                     /gene="LOC139842895"
                     /note="uncharacterized LOC139842895; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842895"
     CDS             1..657
                     /gene="LOC139842895"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689093.1"
                     /db_xref="GeneID:139842895"
                     /translation="MEKVMKVKADEERGTRWGKQSMVYLENNMKAMMENEKGPIWGCD
                     KGHFTRGDHGYPTIMLEAVASYDSWIWHAYFGMASSNNDLNVLNASPLFDSLLTNTAP
                     QVSYEIGDVDFDRGYYLADRIYPSWASFVKGFSSVVDAKRKYFTKKQFAARKDVERTF
                     GILQGRWGILRQPARAYSENKIKRIMYGCIILHNMIIEDNGFNIAENKSYYLPVNNLQ
                     "
     misc_feature    <133..603
                     /gene="LOC139842895"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggagaaag tgatgaaagt gaaggctgat gaagaacgtg gtaccaggtg gggtaaacag
       61 tccatggttt atctcgaaaa caacatgaaa gctatgatgg agaatgagaa gggccctatt
      121 tgggggtgtg acaaagggca tttcacccga ggcgatcacg gttacccgac aatcatgttg
      181 gaagccgttg catcgtatga cagttggatt tggcatgcat attttggaat ggccagttcg
      241 aacaatgact tgaatgtcct taatgcatct ccattgtttg atagtttact aactaacacg
      301 gctcctcaag tttcatacga aattggggac gttgattttg atcgaggcta ctatcttgcc
      361 gatagaattt acccttcgtg ggcttctttc gttaagggat tctcaagtgt tgttgatgca
      421 aaaaggaaat actttacaaa gaaacaattt gcagctcgta aagacgttga gaggacattt
      481 ggaattttgc aaggtcgttg gggtatttta agacaacctg ctagggcata tagcgaaaac
      541 aaaatcaaaa gaatcatgta tggttgcatc atattgcaca acatgataat tgaagacaat
      601 ggttttaaca tcgctgaaaa taaatcttac tacttgcctg tcaacaacct acaatga
//
LOCUS       XM_071832993            1245 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-glucuronosyltransferase
            GlcAT14A-like (LOC139842896), mRNA.
ACCESSION   XM_071832993
VERSION     XM_071832993.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1245
                     /gene="LOC139842896"
                     /note="beta-glucuronosyltransferase GlcAT14A-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 47 Proteins"
                     /db_xref="GeneID:139842896"
     CDS             1..1245
                     /gene="LOC139842896"
                     /codon_start=1
                     /product="beta-glucuronosyltransferase GlcAT14A-like"
                     /protein_id="XP_071689094.1"
                     /db_xref="GeneID:139842896"
                     /translation="MKRPASKFLPSKRRWPFLILRALTVTLFLFAACLNLGTLSSLYK
                     LNSTIFDSRISPFITPVEEKNEVPRFAYLISGSKGDLNKLWRTLRALYHPWNYYVLHL
                     DLESSLEERMELASRVENDPIFATVGNDITVYVIPKANMVTYRGPTMVANTLHACAIL
                     LKKYKDWDWFINLSASDYPLVTQDDLLFTFRDLNRDLNFIEHTSHLEWVETKRAMPLI
                     VDPGLYQNKKSYIFWVEPKRALLTTFKLFTGSAWMILSRSFVEYCIWGWDNLPRTLLM
                     YYTNFASSPEGYFQTVICNSPEYVPTVVNHDMHFISWDTPPKQHPQIHNMNHTDKMIA
                     RGAPFARKFKQDSSILDRIDVELLDRKNGSFTPGGWCKDDPLCVTVGEPTRIEPGPGA
                     QRLGGLVGKLLQQPKFSENQCQ"
     misc_feature    19..1242
                     /gene="LOC139842896"
                     /note="Core-2/I-Branching enzyme; Region: Branch; cl27418"
                     /db_xref="CDD:452742"
ORIGIN      
        1 atgaaacgtc cagcatcgaa gtttcttccc tcaaaaagac gatggccttt tctgatactt
       61 agagctttaa ctgtcactct tttcctattt gccgcatgtt taaatttggg cactttatct
      121 tctttataca agctcaattc gactatattt gattctcgaa ttagtccatt tattacaccc
      181 gttgaagaaa agaatgaagt tccgcgtttt gcttatttga tttcgggatc aaaaggcgat
      241 ttaaataagt tatggaggac acttagagca ttatatcatc catggaacta ttatgttctt
      301 catcttgatc ttgaatcatc actcgaagaa cgaatggagc ttgcttcgcg agttgaaaat
      361 gatcccattt ttgctactgt tgggaatgac attacagttt atgtgatccc gaaagctaat
      421 atggttacct acagagggcc cacaatggta gcaaacacac ttcacgcgtg cgccatcctt
      481 ctaaaaaaat ataaagattg ggattggttt ataaacttaa gtgcatcgga ttatccttta
      541 gtgactcaag atgaccttct ttttacgttt cgtgatttga atagagatct gaatttcatc
      601 gagcatacca gccatttaga gtgggtagag actaaaagag cgatgccatt gatagttgac
      661 cctggactat accagaacaa aaagtcgtat atcttttggg tagaaccaaa acgggctctc
      721 ctaactacgt tcaagttgtt cacagggtct gcatggatga tattgtcacg ttcgttcgtc
      781 gaatattgta tatggggttg ggataatctt ccaagaactc tgctcatgta ctacacaaat
      841 tttgcgtctt cacccgaagg ttactttcaa actgttatct gcaattcacc tgaatacgtt
      901 ccaaccgttg tgaaccacga tatgcacttc atttcttggg acacaccacc aaaacaacat
      961 ccacaaatcc ataacatgaa ccacacagac aaaatgatag caagaggtgc tccatttgcg
     1021 cgtaaattta agcaagacag ttctattttg gacagaattg acgttgagtt gttagaccgt
     1081 aagaatggga gtttcacccc gggtgggtgg tgcaaggatg acccattatg tgtcacggtt
     1141 ggtgaaccca cacggattga accgggccca ggagctcaaa ggcttggtgg acttgttggc
     1201 aagttacttc aacagcctaa gtttagtgaa aatcaatgtc aatag
//
LOCUS       XM_071832994            1089 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase,
            chloroplastic-like (LOC139842897), mRNA.
ACCESSION   XM_071832994
VERSION     XM_071832994.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1089
                     /gene="LOC139842897"
                     /note="palmitoyl-monogalactosyldiacylglycerol delta-7
                     desaturase, chloroplastic-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     Proteins"
                     /db_xref="GeneID:139842897"
     CDS             1..1089
                     /gene="LOC139842897"
                     /codon_start=1
                     /product="palmitoyl-monogalactosyldiacylglycerol delta-7
                     desaturase, chloroplastic-like"
                     /protein_id="XP_071689095.1"
                     /db_xref="GeneID:139842897"
                     /translation="MVLSTPQFTTKLFPKLHSTCAPSHPYSKNKLVLHTRTSIIITHK
                     NYIRFPLQMVNVTPENGIQGSVIILDDAVVKRPKETYRGKKWKDLDLVTVGAVLGMHL
                     LCGFAPFTFTWEALKVAVGLDLMIRLLGVNFSYHRHLSHRSFKIPKWLEYTFAYCGVQ
                     SLQGNPIDWVRIHRYHHQYCDTERDPHTPIKGFWFSHMTWMFDTENITKNMREGPNNV
                     KDLEKQSFYRFMRRTYIAHPIALALLLYTFGGLPFIVWGMGVRTVWGYHITWLVNSVC
                     HGWGDQAWNTQDVSLNNRWVGIIGFGDGWHNNHHAFSYSARHGLEWWQIDVTWYLIRF
                     LEIIGVASNVKLPTPSDIQRRTITNRTL"
     misc_feature    217..1065
                     /gene="LOC139842897"
                     /note="The membrane fatty acid desaturase
                     (Membrane_FADS)-like CD includes membrane FADSs, alkane
                     hydroxylases, beta carotene ketolases (CrtW-like),
                     hydroxylases (CrtR-like), and other related proteins. They
                     are present in all groups of organisms with the...;
                     Region: Membrane-FADS-like; cl00615"
                     /db_xref="CDD:445012"
     misc_feature    order(406..408,421..423,517..519,526..531,916..918,
                     925..930)
                     /gene="LOC139842897"
                     /note="Di-iron ligands [ion binding]; other site"
                     /db_xref="CDD:239582"
ORIGIN      
        1 atggtgttgt caactccaca atttaccacc aagttatttc caaaacttca ctcaacatgt
       61 gcaccatctc acccttattc caaaaacaag ctagttttac acacaagaac aagtatcatt
      121 atcacccaca agaactatat aagattccca ttacaaatgg tcaatgtgac acccgaaaat
      181 ggtatacaag gaagtgttat aattttggat gatgcggtgg ttaagcgacc gaaagaaact
      241 tatcgcggta agaaatggaa agacttggac ttggtgacag ttggagcagt tttgggtatg
      301 catttgttat gtggctttgc tccatttacc ttcacttggg aagctttaaa ggttgcagtt
      361 ggtttggatc tcatgattcg ccttcttgga gttaattttt cgtaccatag acatctatca
      421 catagaagtt tcaagatccc aaaatggctt gaatatacat ttgcttattg tggggttcaa
      481 tctcttcagg ggaacccgat agattgggtg agaatacatc gatatcatca tcagtattgt
      541 gatacagaga gagacccaca tacaccgatc aaaggatttt ggtttagtca tatgacttgg
      601 atgtttgata ccgaaaacat tacaaaaaat atgcgtgaag ggccgaataa tgtcaaggat
      661 ttggagaaac aatcatttta taggtttatg agaaggacgt atatcgcaca tcctatagca
      721 ctcgctcttc ttctatatac atttggaggt ctacccttca ttgtttgggg aatgggggtg
      781 aggacagtgt gggggtatca cattacatgg ctagtgaact cagtttgtca tggatgggga
      841 gatcaagcat ggaacacaca agatgtttct cttaacaatc ggtgggttgg gataatagga
      901 tttggagatg gatggcacaa caatcatcac gcgtttagtt actcggcaag acacggtcta
      961 gaatggtggc aaatcgatgt tacgtggtat ttgattcgtt ttcttgagat aattggggtg
     1021 gcttctaatg ttaaattgcc aactccaagt gatattcaaa gaagaacaat tactaataga
     1081 actctgtaa
//
LOCUS       XM_071832996             570 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842898), mRNA.
ACCESSION   XM_071832996
VERSION     XM_071832996.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..570
                     /gene="LOC139842898"
                     /note="uncharacterized LOC139842898; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842898"
     CDS             1..570
                     /gene="LOC139842898"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689097.1"
                     /db_xref="GeneID:139842898"
                     /translation="MCVFGQPGPGAALQDLERRSDAVSHCGFRSVASSLGRHEDCWPQ
                     IRSELLEEIRMHHATYVDMFGEVELKRIYNVINLPLNTPATSQYWMILPIMGFLIASR
                     YNVVLLFLSNLADTTCLPLWSSPPVVQSHYVCVIARVHGNHFVKVDLAGDYPVPPTHP
                     QWNYYKYDAEWERPYKTQQDVYLQLRRSN"
     misc_feature    73..432
                     /gene="LOC139842898"
                     /note="OTU (ovarian tumor) domain family; Region: OTU;
                     cd22744"
                     /db_xref="CDD:438581"
     misc_feature    order(76..78,214..216,244..246,265..270,274..279,358..360,
                     364..366,412..414,424..432)
                     /gene="LOC139842898"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]; other site"
                     /db_xref="CDD:438581"
ORIGIN      
        1 atgtgcgttt ttggacagcc ggggcccgga gcggcgctcc aggaccttga gcggcgctca
       61 gatgcggtgt cacattgtgg attcagatca gtagcttcat ctcttggtcg ccatgaagat
      121 tgttggccgc agattagaag tgagttgtta gaagaaataa gaatgcatca tgcaacatat
      181 gttgatatgt ttggcgaagt tgaattgaaa cgaatttata atgtgatcaa tcttccacta
      241 aatactccag caacttcaca atattggatg attttaccga taatgggttt tctaattgct
      301 tcaaggtaca atgtggtttt gttgttcttg agcaatctag cagatacgac atgtttaccg
      361 ctttggtcca gtccacccgt ggtacaatca cattatgtgt gtgtaattgc tcgtgtacat
      421 ggtaatcact ttgtaaaagt ggatttggca ggagattatc cggtacctcc aactcatccg
      481 caatggaatt actataaata tgatgccgaa tgggaacgtc cttataaaac tcaacaagat
      541 gtgtatcttc aacttagacg ttcaaattaa
//
LOCUS       XM_071832997             723 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842899), mRNA.
ACCESSION   XM_071832997
VERSION     XM_071832997.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..723
                     /gene="LOC139842899"
                     /note="uncharacterized LOC139842899; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842899"
     CDS             1..723
                     /gene="LOC139842899"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689098.1"
                     /db_xref="GeneID:139842899"
                     /translation="MVLEDLLLSESESENSVTDSDSEESDSDEDLIQEGYNTLNLLDS
                     LDAMDEEDEARNSRTIIRRRRLQRDRIDTGNRLYNDYFSDNPTFSGDYFRNRYRMSKS
                     LFMCIGHAILSYDSQPRPDYFKHFDQRYNATGQLGFNIFQKCTSPIRQLAYDIAPDAF
                     DEYLHMGASTSHGCLKNYCKCIIHMFSREYLRKPTEEDVRRLHAKHLEMHDFLGMLGS
                     LDCMHWAWKNCLVAWQGHYHRT"
     misc_feature    565..>717
                     /gene="LOC139842899"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggtattgg aagatttatt actttctgag agcgaaagcg agaatagcgt gacggatagt
       61 gatagcgaag agtccgattc tgatgaagat ttaattcaag aaggttacaa cacgcttaac
      121 ttactcgatt cgcttgatgc aatggacgaa gaagatgagg ctcgaaattc tcgtacaatt
      181 attagaagac gccggttaca aagagatcgt attgataccg gtaatcgttt gtacaatgac
      241 tatttctcgg ataatccaac attttctggt gattattttc gaaatcgata ccgaatgagt
      301 aagtcattgt ttatgtgtat tggtcatgct attctatcgt atgattctca accgagaccc
      361 gattatttta aacattttga tcaacgttac aatgcaaccg gtcaactcgg tttcaatatt
      421 tttcaaaagt gtacatcgcc catacgtcaa ttggcgtatg acattgcacc tgatgcattc
      481 gatgagtatt tacacatggg cgcatcaaca tctcatggtt gtttaaagaa ttattgcaaa
      541 tgtattattc atatgttttc gcgagaatat ttaaggaaac caactgaaga agatgttcgt
      601 cgattgcatg ccaaacattt ggagatgcac gattttttgg gtatgttagg tagtctcgat
      661 tgcatgcact gggcttggaa aaattgtcta gttgcgtggc aagggcatta ccacaggaca
      721 tga
//
LOCUS       XM_071832998            1190 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842900), mRNA.
ACCESSION   XM_071832998
VERSION     XM_071832998.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1190
                     /gene="LOC139842900"
                     /note="uncharacterized LOC139842900; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842900"
     CDS             1..1005
                     /gene="LOC139842900"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689099.1"
                     /db_xref="GeneID:139842900"
                     /translation="MWADIGGPLPIQFDVSVLGTGRPIGPHKSMCINMLAGIVKDPLF
                     PKHYESWEKVPGENKEKIWLDLGGFFKMGDWLDGGHTQKVVEAGVNSLCADRWRNAKS
                     KQKKYFTDNDGYALPNNLRNRPPPNVQQRLWDPFVDLMLSSKFRARSAQNKKNRAKME
                     YASTQGSRSIADRVASLDPPSLIENFKNNHTFKKGGWSGDKARVNHEKMLKLKEKYPE
                     RSDEVIMLEVLGKRRGYRRGVGKTLPGSASTSSSSSTCQTRRPPPPGSENPLLKEAVY
                     DTFAFNNMAIPPQWQSFFPTPNQTQETEGEDEGDDDEDMEESGASQSESDEENEDEAR
                     "
     misc_feature    394..723
                     /gene="LOC139842900"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
ORIGIN      
        1 atgtgggctg acattggtgg accattgccg attcagtttg atgttagtgt gttggggacc
       61 ggtcgcccga taggcccaca caagtcgatg tgtattaaca tgctcgcggg aatcgttaag
      121 gacccgttat ttccaaagca ttacgagagt tgggaaaagg ttcctggcga aaacaaagaa
      181 aaaatttggc ttgatctcgg tgggtttttt aagatgggcg actggctaga tggtggacat
      241 acccaaaagg tggtggaagc cggggtaaat tctttgtgcg cggaccgatg gagaaatgct
      301 aaaagtaaac aaaaaaaata tttcacggat aatgacgggt acgcacttcc caataacctt
      361 cgaaaccgac ccccaccgaa tgttcaacaa cgtctatggg acccatttgt ggacctaatg
      421 ctttcaagta aattccgggc tcgttctgcg cagaacaaga aaaatagggc gaagatggaa
      481 tacgccagta cgcagggtag caggtcaatt gccgaccgtg tggcctctct ggatcctccg
      541 agtcttatcg aaaacttcaa gaacaaccac acttttaaga aaggtggatg gagtggggat
      601 aaagctaggg tgaaccacga aaaaatgttg aaattaaaag aaaaatatcc ggaaaggagt
      661 gatgaagtca ttatgttgga agttttaggc aaacgtcgcg ggtaccgtcg cggagtgggt
      721 aaaacgttac ccggatcggc tagtacatca tcttcatcat caacttgtca aacaagacga
      781 ccaccaccac cgggttccga aaacccattg ctaaaggaag cggtatacga tacttttgcc
      841 tttaacaata tggcaatccc gccccaatgg caatcttttt tcccaacccc caatcaaact
      901 caagaaaccg aaggtgaaga cgaaggtgat gacgatgaag acatggaaga aagtggtgcg
      961 tctcaaagcg aaagtgatga agaaaatgaa gatgaagcaa ggtaagtttg taagtttgtt
     1021 tgctattcgg atttggttta agtttgtaaa ctttggataa tgttttaagg ttgtaaactt
     1081 tgtgtcggat tgtaatcttt tagtattcgg attaagtttg taacggttgg ataatgtttc
     1141 ggacatgttt taattaatgt tgagcttgtg tttgtgaaat atattgtgtt
//
LOCUS       XM_071832999            1263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides equilibrative nucleotide
            transporter 8-like (LOC139842901), mRNA.
ACCESSION   XM_071832999
VERSION     XM_071832999.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1263
                     /gene="LOC139842901"
                     /note="equilibrative nucleotide transporter 8-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:139842901"
     CDS             1..1263
                     /gene="LOC139842901"
                     /codon_start=1
                     /product="equilibrative nucleotide transporter 8-like"
                     /protein_id="XP_071689100.1"
                     /db_xref="GeneID:139842901"
                     /translation="MDHHQLPHSMMIEREVVFEEEPKDKYHLAYMIHFLLGAGYLIPW
                     NAFITAVDYFQVLYPSKHVNKVFSVGYMSAAVIVLFTLMYWSRSNRVKLPSVRTRMNM
                     GQALFVVALMVPPVTDWIDHGDHVSSTGSNIEFVVLVTMVMICGLADGLVGGSLIGST
                     GELPERYMQAVFAGNAIAGLMTSALRIITKASLPHNQKGLRSSAHIYFSFSAFLVLLC
                     IICTNVLHKLPVIQFYRTKKATDPNPNPTHRKSIDPNFFGVFKKIRWPVAAVFSVYLV
                     SISIFPGYLSENVKSSHFTDWYPILLITTFNFGDLIGKLFTTIYVPVNSKVVVLCSVG
                     RVLFYPFFVGCIYGPNWMRSETSVIVLTLILGLTNGYLTSVLMMLAPKLVHIDKSEVV
                     GIIMQTFLFIGLVLGSVVAWIWNFAKVK"
     misc_feature    100..1248
                     /gene="LOC139842901"
                     /note="Nucleoside transporter; Region: Nucleoside_tran;
                     cl15430"
                     /db_xref="CDD:472807"
ORIGIN      
        1 atggatcatc atcagttacc acattcgatg atgatcgaac gtgaagtagt atttgaagaa
       61 gaaccaaaag acaagtacca tttagcatac atgatccatt ttctactcgg tgcgggttat
      121 ttgataccat ggaatgcttt catcacagcc gttgattact ttcaggtttt atacccatcc
      181 aaacacgtta acaaagtgtt ctctgttggt tatatgtcag cagccgtgat tgttcttttt
      241 actctcatgt attggtcacg gtctaaccgg gttaagttac cgtcggttcg gacccggatg
      301 aatatgggtc aggctttgtt tgttgttgct ttgatggtgc ctccagtgac agattggatt
      361 gatcatggtg atcatgtgag tagcacggga tcgaatatag aatttgtggt gcttgttacg
      421 atggttatga tttgtgggtt agctgatgga cttgtgggtg gaagtttaat cgggtctacc
      481 ggagaactac cggaacggta catgcaagct gtttttgccg gcaatgcaat tgctggttta
      541 atgacatcag cattaagaat cataacaaag gcgtcccttc cacacaatca aaaaggtctt
      601 cgatcaagcg cacatatcta cttcagtttc agcgcgttcc tcgtacttct atgcatcatc
      661 tgcaccaatg tgctacacaa attacccgtg atccaatttt atcgtaccaa aaaagcgact
      721 gacccgaacc cgaacccgac ccatcgcaag tccattgacc caaatttctt tggcgtgttt
      781 aagaagatac ggtggccagt tgctgcagtg ttttcagtat accttgtttc aatatcaata
      841 tttcctggtt atttgagtga aaacgttaaa tcctcacatt tcactgattg gtatcctata
      901 cttttaatta cgacgtttaa ttttggtgac ttgatcggaa aattatttac cacaatttat
      961 gtaccggtta atagtaaggt ggttgtattg tgtagtgtgg gtcgggtgtt attttacccg
     1021 tttttcgtgg gttgtattta tgggccaaat tggatgcgta gtgaaacttc ggtgatagtt
     1081 ttgactttga tattagggct aaccaatggg tacttgacaa gtgtgcttat gatgcttgca
     1141 cccaagttgg ttcatatcga taaatcggaa gtggttggga ttattatgca aacgtttttg
     1201 tttattgggt tagtgcttgg ttctgttgtt gcttggatat ggaactttgc aaaagttaaa
     1261 tga
//
LOCUS       XM_071833000            1179 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glucan
            endo-1,3-beta-glucosidase 11-like (LOC139842902), mRNA.
ACCESSION   XM_071833000
VERSION     XM_071833000.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1179
                     /gene="LOC139842902"
                     /note="glucan endo-1,3-beta-glucosidase 11-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:139842902"
     CDS             1..1179
                     /gene="LOC139842902"
                     /codon_start=1
                     /product="glucan endo-1,3-beta-glucosidase 11-like"
                     /protein_id="XP_071689101.1"
                     /db_xref="GeneID:139842902"
                     /translation="MDFSLPYHPLFVLLLIAFNNVLIASAFTGTYGVNYGRIADNLPS
                     PESVVTLMKAAKIKNTRIYDANHDVLKAFKGSGIEIIIGLGNEFLKDISVSQDRAMDW
                     VKQNVEPFVPGTHISGIAIGNEVLGGADQELWEVLLPAVKNVHSALEALHLDDDVEVS
                     SPHSAGVFASSYPPSAGAFKETLIPYMKPLLEFFSKIKSPFYINTYPFLAYISDPEHI
                     DINYALFKKNPGIFDEKTKLHYDNMFEAQIDAAYAALEKVGYGKMEVIVSETGWASRG
                     DPNEAGATISNARTYNLNLRKRLLKKKGTPYKPKMVVKAYVFAMFNENLKPGPTSERN
                     FGLFKADGSISYDIGFTGLVPSSATSVFSLKVYKKIKITKSFHVLYLLISIFFIFFIL
                     "
     misc_feature    94..1050
                     /gene="LOC139842902"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     Region: Glycosyl hydrolases; cl23725"
                     /db_xref="CDD:474034"
ORIGIN      
        1 atggatttct ctttaccgta tcatccgttg tttgttttac tactaatcgc ctttaacaat
       61 gttttaatag ctagtgcatt cacgggtacg tatggagtta attatggaag aatagccgat
      121 aatctcccct ctcccgaaag cgtagtaact ctcatgaagg ccgcaaagat taaaaacacg
      181 cgtatatatg atgcaaacca tgatgttctc aaggcattta aaggatcagg aattgagatc
      241 atcataggac tcgggaacga gttcttgaaa gatataagtg taagtcaaga tcgtgcaatg
      301 gattgggtta aacaaaatgt agaacctttt gtacccggga cccacattag tggaattgcg
      361 attggtaacg aggttttagg tggtgctgat caagaacttt gggaagtctt attgccagct
      421 gtgaaaaatg tccattctgc ccttgaagcc cttcatttag acgatgatgt tgaggtttca
      481 agcccgcatt cggctggtgt gtttgctagt tcgtaccctc catcagcagg ggcgtttaag
      541 gaaacattga ttccatatat gaaaccactt cttgaattct tctcgaaaat caaatcgcct
      601 ttttatataa acacgtatcc gtttcttgct tacataagtg acccagaaca cattgatata
      661 aattacgcgc tatttaaaaa gaatccgggg atttttgatg agaaaactaa attacattat
      721 gataacatgt ttgaagcaca aatagatgcg gcgtatgcag ctttagaaaa agtcggttat
      781 ggaaaaatgg aggttatagt gtcggaaacg ggatgggctt cgcgtggtga tccaaatgaa
      841 gcgggggcta cgattagtaa tgcacgaact tataacttga acttacgaaa acgacttctt
      901 aaaaagaagg gtacacctta caaacctaaa atggtcgtta aagcgtacgt gtttgccatg
      961 tttaatgaga atttgaagcc cgggccgact tcagagagaa atttcgggct ttttaaagca
     1021 gacggtagca tttcgtatga tattgggttc acaggacttg taccctcttc agcaacatct
     1081 gttttttctt tgaaggtata caagaaaatt aaaattacta aatcgtttca tgttttatat
     1141 ttactaattt ctattttttt tatttttttt attttgtag
//
LOCUS       XM_071833001            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842903), mRNA.
ACCESSION   XM_071833001
VERSION     XM_071833001.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139842903"
                     /note="uncharacterized LOC139842903; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842903"
     CDS             1..1077
                     /gene="LOC139842903"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689102.1"
                     /db_xref="GeneID:139842903"
                     /translation="MALSKGTKLITTNQDELENEEASIRNTSDTDVHMIHSWVAGQRR
                     KSGIGRIYTDTGAGAEVMFEHCFLQLPENFRRKKKAATSPLPGFNCTATWPVGSITLE
                     VVLVTLPFQSAADIEFSIVKTDSRYNVILGRNALQKFGAITSTVHGMLKFPTPAGIAT
                     IRTQEMEPIECMQIFNGASDIVVHDDGYVSPNPKHPDQRIQIGTTLSTNARDTLCKLL
                     AASIDVFAWVPSDMTGVPRDIAQHRLNVNPNITPVVQKKRAMALERSEFLDNEVQRLV
                     DAGIMKKVKYQTWVANPVMVKKADGSWRMGYQQIPMAEIDEEETAFFTNKGIFCYTKM
                     PFGLKNDGATYQKLIDKAFQGQIG"
     misc_feature    160..411
                     /gene="LOC139842903"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(160..162,166..168,172..174,253..261,388..390)
                     /gene="LOC139842903"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    160..168
                     /gene="LOC139842903"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    160..162
                     /gene="LOC139842903"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(253..264,274..285)
                     /gene="LOC139842903"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
     misc_feature    835..>1074
                     /gene="LOC139842903"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    1009..1011
                     /gene="LOC139842903"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238185"
ORIGIN      
        1 atggcgctat ctaaaggtac gaaattaatc acaactaacc aagacgagct tgaaaacgaa
       61 gaagcaagca tacgcaacac tagtgacacc gatgttcata tgattcattc gtgggtcgcg
      121 ggacagagac gaaaatcagg gatcgggcga atatacacgg acactggtgc gggagctgag
      181 gtcatgttcg aacattgttt tctgcagcta ccagaaaact tcagacgaaa aaagaaggca
      241 gcaacttcgc cactaccagg attcaattgc actgcaactt ggccggtggg gtccataacc
      301 ctggaggtgg ttttggtaac attacccttt caaagtgcag cagacataga attctctatt
      361 gtcaaaacag actcacggta taacgtcatc ttgggacgta atgccttgca gaagtttggc
      421 gcgattacct ccacagtcca tggtatgctg aaattcccga ctccagccgg aatcgctaca
      481 atccggacac aagaaatgga accaattgaa tgcatgcaaa tattcaacgg agcaagtgat
      541 atcgtagtcc atgacgacgg ttatgtatcc ccaaatccca agcatccgga ccaacggata
      601 cagattggta ctactttgag cacaaatgca agggatacgc tctgcaaact cctagcagca
      661 agtattgacg tctttgcctg ggtaccatcg gacatgacgg gtgtcccacg cgacatagcc
      721 caacatcggc taaacgtaaa cccgaatatc acaccagtcg tccagaagaa aagggcaatg
      781 gcgttagaac gaagtgaatt cctggataac gaagtacaac gactagtcga tgccggcata
      841 atgaaaaaag taaaatatca aacatgggta gcgaaccccg tgatggtaaa gaaggcagac
      901 ggatcttggc gcatgggcta tcagcaaatc cctatggcag aaatcgacga agaagaaacc
      961 gcattcttca cgaacaaagg catcttttgc tataccaaaa tgccattcgg gctaaagaat
     1021 gacggagcaa cataccaaaa gctaatcgac aaagcattcc agggtcaaat tgggtga
//
LOCUS       XM_071833002            1326 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable polygalacturonase
            At3g15720 (LOC139842904), mRNA.
ACCESSION   XM_071833002
VERSION     XM_071833002.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1326
                     /gene="LOC139842904"
                     /note="probable polygalacturonase At3g15720; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:139842904"
     CDS             1..1326
                     /gene="LOC139842904"
                     /codon_start=1
                     /product="probable polygalacturonase At3g15720"
                     /protein_id="XP_071689103.1"
                     /db_xref="GeneID:139842904"
                     /translation="MGAEGAGRPQYESDSTDTLLRINCMHLVSIIFMQVQMVTLVLVL
                     LSSMLSFALSSSVRISLASTTIFDVMKFGAKGNGETNDSPAFMNAWKVACQLQGNDES
                     IIVIPKGRTFLLNPITFSGPCKPSKIFVQVSGNIVAPTKKTDWFGHHYDTWILFTLVN
                     YLTVSGNGRIDGQGPIWWKDACITPPAPGKTCHAPVALQFKRCNNLRLNGLTHVNSPR
                     VHITITTCDGVIVSNLHIIAPETSPNTDGIDVATSTNVNIRDSIIETGDDCIAISGGS
                     SYIRISGIMCGPGHGISIGALGGTDVVENVAVSNCTMKKTLTGVRIKTWQGGSGHARK
                     ISFAGVNFDAVYNPIIIDQYYCPTRKNCLLSTSAVKLSDITYRGISGTSMMENVINLS
                     CSKTVACTNIVIDSVYITSAIPGRKVYGSCINAHGRASYVEPSLNCLQP"
     misc_feature    160..1305
                     /gene="LOC139842904"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 atgggggcag agggggccgg ccgcccccaa tatgaaagtg acagtacgga cacattactg
       61 agaatcaatt gtatgcactt agtaagcatc atattcatgc aggttcagat ggtcacattg
      121 gttttggtct tgctatcaag tatgctctct tttgctttaa gttctagtgt aagaatcagt
      181 cttgcatcaa ccaccatttt tgatgtgatg aagtttggcg ccaaaggaaa tggagaaacc
      241 aacgactcac cggcttttat gaatgcatgg aaggtcgctt gccaattgca agggaatgat
      301 gagagtataa tagtcatacc aaaagggagg acgtttctct tgaatccaat aactttcagt
      361 ggtccatgca agccttccaa aatattcgtc caggtgtcgg gaaacattgt cgctccaacc
      421 aagaaaacag attggtttgg tcatcactac gatacatgga tcttgtttac gctggtgaac
      481 tatcttacag taagtggaaa tggacgaata gatggtcaag gtcctatttg gtggaaggat
      541 gcctgcatta ctcctccagc accaggtaaa acttgtcatg caccagtggc cttacagttt
      601 aaaagatgca ataacttgcg acttaatggt ttaacacatg taaacagccc acgagtccat
      661 atcacaataa cgacttgtga cggggtcatc gtatctaatt tacacatcat tgcccctgaa
      721 acaagtccaa atactgatgg cattgatgtg gcgacgtcca ccaatgtcaa tatacgtgac
      781 tccatcattg aaacaggaga cgactgtatt gcaattagtg gaggttcatc ttatatcaga
      841 attagtggta tcatgtgcgg gccaggccat gggataagta ttggagcttt gggaggaact
      901 gatgtggtag aaaatgtagc tgttagtaac tgcaccatga aaaaaacgtt aactggagta
      961 cgaatcaaaa catggcaggg aggaagtggt catgcaagga agatctcatt tgcaggcgtc
     1021 aacttcgacg cggtgtataa cccaattata attgaccaat actattgtcc tactcggaag
     1081 aattgcctac tctctacatc agctgtgaag ttgagtgaca tcacatacag aggaatatca
     1141 gggacatcga tgatggaaaa tgtcataaac ctaagttgca gtaaaactgt tgcatgcaca
     1201 aacattgtaa tcgatagtgt gtatataacg tctgcaattc caggaagaaa agtttatggc
     1261 agctgtataa acgctcatgg aagagctagc tatgtagagc cttcattaaa ttgcctacaa
     1321 ccttag
//
LOCUS       XM_071833003            1362 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable polygalacturonase
            At3g15720 (LOC139842905), mRNA.
ACCESSION   XM_071833003
VERSION     XM_071833003.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1362
                     /gene="LOC139842905"
                     /note="probable polygalacturonase At3g15720; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 50 Proteins"
                     /db_xref="GeneID:139842905"
     CDS             1..1362
                     /gene="LOC139842905"
                     /codon_start=1
                     /product="probable polygalacturonase At3g15720"
                     /protein_id="XP_071689104.1"
                     /db_xref="GeneID:139842905"
                     /translation="MAEGNTDNQGNLTLSEAPVQMVTLVLVLLSSMLSFALSSSVRIS
                     LASTSNIFDVMKFGAKGNGKTDDSPAFMKAWKAACQSQGNRRSILVIPRGVTFFLKPI
                     TFSGPCKPSNIYVQVSGNIVAPTKKTDWFGHYHDRWILFALVNGLTMSGNGRIDGQGP
                     IWWKDACITPPAPGTTCHAPAALQFKRCNNLRLNGLTHLNSPRVHITITTCNGVIVSN
                     LHIIAPETSPNTDGINVATSTNVNIRDSIIATAGLFQSCITIGDDCIAISGGSSNIKI
                     SGIMCGPGHGISIGSLGGTDVVENVDVKNCTMRKTLTGVRIKTWQGGSGYARKISFAG
                     IKFDAVYNPIIIDQNYCPTQENCLFSSDEFIDIFLYVGFSNTKTSAVKLSDITYRGIS
                     GTSMMENVINLSCSKTVACTNIVMDRVYIKSAIQGRTVYGSCTNAHGRASHVKPSFNC
                     LKP"
     misc_feature    151..1356
                     /gene="LOC139842905"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 atggctgaag gaaatactga caatcaaggg aacctgacat tgtcggaagc accggtgcag
       61 atggtcacat tggttctggt cttgctatca agtatgctct cttttgcttt aagttctagt
      121 gtaagaatca gtcttgcatc aacctccaat atttttgatg tgatgaaatt tggcgccaaa
      181 ggaaatggga aaaccgacga ctcaccggct tttatgaagg catggaaagc ggcttgccaa
      241 tcgcaaggga atcgtaggag tatattagtc ataccaagag gagtgacgtt tttcttgaag
      301 cctataactt tcagcggtcc atgcaagcct tcgaatatat acgtccaggt atcaggtaac
      361 atcgtcgctc caacaaagaa aacagattgg tttggtcatt accacgatag atggatctta
      421 tttgcgctgg tgaacggtct tacaatgagt ggaaatggac gaatagatgg tcaaggtcct
      481 atttggtgga aggatgcctg cattactcct ccagcaccgg gtacaacttg tcatgcacca
      541 gcggccttac agtttaaaag atgcaataac ttgcgactca atggtttaac acatttaaac
      601 agcccacgag tccatatcac aataactact tgtaatggtg tcatcgtatc taatttacac
      661 atcattgccc ctgaaacaag tccaaatacc gacgggatta acgtggcgac ctccactaat
      721 gtcaatatac gtgactcaat tatcgcgaca gccggccttt ttcaatcttg tataaccata
      781 ggagacgact gtattgctat tagtggaggt tcatctaata tcaaaatcag tggtatcatg
      841 tgcggtccag gccatgggat aagtattgga tccttgggag gaactgatgt ggtagaaaat
      901 gtagatgtta agaactgtac catgagaaaa acgctaactg gagtacggat caaaacttgg
      961 cagggaggaa gtggttatgc aaggaaaatc tcatttgcag gcattaagtt cgatgcggtg
     1021 tacaatccaa tcataattga ccaaaactat tgtcctactc aggaaaactg cctattctct
     1081 tcagacgaat ttattgatat ttttctatat gtgggattct caaatacaaa gacatcggct
     1141 gtaaagttga gtgacatcac atacagagga atatcaggga catcaatgat ggaaaatgtc
     1201 ataaacctaa gttgcagtaa aactgttgca tgcacaaaca ttgtgatgga tcgtgtgtat
     1261 atcaagtcag caattcaagg aagaacagtt tatggcagct gtaccaatgc acatggaaga
     1321 gctagccatg taaaaccttc atttaattgc ctaaaacctt ag
//
LOCUS       XM_071833004            1653 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable polygalacturonase
            At1g80170 (LOC139842906), mRNA.
ACCESSION   XM_071833004
VERSION     XM_071833004.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1653
                     /gene="LOC139842906"
                     /note="probable polygalacturonase At1g80170; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139842906"
     CDS             1..1557
                     /gene="LOC139842906"
                     /codon_start=1
                     /product="probable polygalacturonase At1g80170"
                     /protein_id="XP_071689105.1"
                     /db_xref="GeneID:139842906"
                     /translation="MKQNMSEGLLEVAEIEESLNPKFHYYKKSLKSCKRDLALYMIVE
                     RKKMISSSSSPSDHKFVCKFVCIIIYSVFLFSISINVQAFDSLLHRSSQFWGFNNFFE
                     SRIVLNVKDYGAVGDGIKDDTKVFADVWDIACSSEVESTIIIPAECNCLVGPISFGGP
                     CNSNVTLMIYGSIVAPSDPDVWNGNNTQKWLYFHNVDHLKVDGGGIIDGMGQEWWASS
                     CKRDPTNPCRHAPTAISFHRCNDLTVRNLMIVNGQQMQMAFTTCDGVTASRLTVFAPA
                     GSPNTDGIHISASTNVKLKDTTVRTGDDCISIVSNSSKVQVRNIFCGPGHGISIGSLG
                     ESGTCDQVYDISVYGAFLSNTDNGLRIKTWQGGSGFVNNVKFENIWMENVSNPIIIDQ
                     YYCDKHKACPNKTCAVNVNNISFVNVKGTSVTKEAIIFACSDVSPCEGLYLEDIELVS
                     PSGGITTSYCWEANVTTSSIVYPPTCVSPCRNFIDQIIASTFIFKPLIQCFSRLHQLA
                     HYAVRHVLLH"
     misc_feature    184..1470
                     /gene="LOC139842906"
                     /note="Polysaccharide Lyase Family 6; Region: PL-6;
                     cl19188"
                     /db_xref="CDD:450265"
ORIGIN      
        1 atgaaacaaa atatgagtga agggctactt gaagtcgctg aaattgaaga gagtttaaac
       61 cctaaatttc attattataa gaaatcccta aaatcatgta agagagattt agctctgtac
      121 atgattgtag aaagaaaaaa aatgatatca tcatcatcat caccttcgga tcataaattt
      181 gtctgtaaat ttgtgtgtat catcatttac tctgtattcc ttttttcaat ctccattaat
      241 gtgcaggctt ttgattcgtt actacatcgg tcatctcaat tttggggttt caacaacttt
      301 ttcgagtcaa gaattgtcct aaatgttaag gattatggtg cagtaggaga tggtattaaa
      361 gatgacacaa aggtatttgc agatgtttgg gacatagcat gttcttcaga agtcgaatca
      421 acaattataa ttccggctga atgtaattgt ctcgttggac cgattagttt cggaggccct
      481 tgcaactcga atgtgacttt aatgatttat ggttcgattg ttgctccgag cgatcctgat
      541 gtttggaatg gtaataatac acagaagtgg ctatatttcc ataatgtgga tcaccttaag
      601 gttgatggag gaggaatcat cgatggaatg gggcaagaat ggtgggccag ttcttgcaag
      661 agggacccaa caaatccttg cagacatgct ccaacggcga tatcttttca cagatgcaac
      721 gatttgacag tgaggaatct gatgattgtt aatggtcaac aaatgcaaat ggcgttcaca
      781 acatgtgatg gggtcacagc atcacgtctg accgttttcg ctcctgctgg tagccctaat
      841 acagacggta tccacataag tgcatccacg aatgtaaaat taaaagacac tactgttaga
      901 acaggtgatg actgcatatc gatagtcagt aattcatcaa aagttcaggt caggaatatt
      961 ttctgtggcc caggtcacgg gataagcatc ggaagcttgg gagagtctgg gacgtgcgat
     1021 caagtttacg atattagtgt ctatggggca tttttgtcca acactgataa tggactcagg
     1081 atcaaaacat ggcagggagg tagtggtttt gtcaacaatg tgaaatttga gaatatatgg
     1141 atggaaaatg tatcaaatcc gattataatc gatcaatatt actgtgacaa acacaaggca
     1201 tgtccaaaca agacttgtgc tgttaatgtg aacaacatat cgtttgtgaa cgttaaagga
     1261 acttcggtta ctaaggaagc tataatattc gcttgtagtg atgtttctcc ttgcgaaggg
     1321 ttatatttgg aagacatcga acttgtatca ccctcgggcg gtatcacaac ttcgtattgc
     1381 tgggaagcta atgttacaac ttcgagtatc gtataccccc ctacttgtgt ttcaccttgt
     1441 agaaacttta ttgatcagat cattgcgtct accttcatct ttaagccatt gattcagtgt
     1501 ttctcaaggt tacatcaact tgcacattat gcagtgagac atgtactgct tcattgattt
     1561 gtacttaata agaaaaaggc accttaatat tttttaatgt atatgacttg tgtaaaacta
     1621 acaataatat atttaggtgt gaaatatgat atg
//
LOCUS       XM_071833005            1125 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides BIIDXI-like protein
            At5g11420 (LOC139842908), mRNA.
ACCESSION   XM_071833005
VERSION     XM_071833005.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1125
                     /gene="LOC139842908"
                     /note="BIIDXI-like protein At5g11420; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     Proteins"
                     /db_xref="GeneID:139842908"
     CDS             1..1125
                     /gene="LOC139842908"
                     /codon_start=1
                     /product="BIIDXI-like protein At5g11420"
                     /protein_id="XP_071689106.1"
                     /db_xref="GeneID:139842908"
                     /translation="MQNLSAFLVVVLLCATSNAVLSFTDGILPNGAFEQGPKPHQLKG
                     TRVIDPKAIPNWELTGFVEYIKSGQTQGDMLLVVPDGAFAIRLGQDASVKTKVKVKKG
                     LFYSMTFNVARTCAQEEKLNVSVLPNSEAKDWGILPMQTIYSSNGWDTYSWGFLAEAN
                     NIEIVIHHPIGDEKDPACGPLIDSIALKALFPPRRTNVNMLKNGDFEEGPFVLPKTDN
                     GGVLIPPNIEDDHSPLPGWMIESLKAVKYLDAEHYAIPKGKRAVELIAGKESAIAQVV
                     MTTPGKVYALSFLVGDANNGCVGSMIVEAFAGKSTLQVPYESKGKGGFKQAVLKFRAV
                     TTRTRIRFLSTFYQIKVDGSLCGPIIDDVRLVGVRYAKHG"
     misc_feature    1..1107
                     /gene="LOC139842908"
                     /note="hypothetical protein; Provisional; Region:
                     PLN03089"
                     /db_xref="CDD:215569"
ORIGIN      
        1 atgcagaacc tctctgcatt cttagtggtg gtgctactct gtgcaacctc caatgctgtt
       61 ctatctttca ctgacggaat attgccaaat ggagcgtttg aacaaggccc aaaacctcac
      121 cagttaaagg gtactagagt gattgaccca aaggcaatac caaactggga actcaccggg
      181 ttcgtagagt acattaaatc gggccagaca caaggagaca tgttattagt agtacccgat
      241 ggagctttcg cgattaggct aggacaagat gcatcagtaa agacaaaagt taaggttaaa
      301 aaagggttgt tttattctat gacatttaac gtggctagaa cttgtgcaca agaggagaag
      361 ttgaacgttt cagtgttgcc gaattcagaa gccaaagact ggggaatctt gccaatgcaa
      421 accatatata gtagcaacgg ttgggacact tactcatggg gatttttggc cgaagccaat
      481 aatatagaga tcgttatcca tcacccgata ggggatgaga aagacccggc ttgcggtcct
      541 ctcattgatt ccatcgcgtt gaaggcctta ttccctccta gaagaactaa tgttaatatg
      601 ttgaagaatg gagatttcga agaggggcct tttgttctac ctaaaaccga caatggtggt
      661 gttttgatcc ctcctaatat cgaggacgac cattcaccac ttcccggttg gatgatcgag
      721 tcactaaaag ccgtgaagta tttagatgcc gaacattatg ccatcccaaa gggtaaaaga
      781 gccgtagaat tgattgcagg aaaagaaagt gcgattgccc aagtagtcat gactaccccg
      841 ggcaaagtgt atgcactttc ttttcttgtc ggtgatgcta acaacggttg cgtggggtcc
      901 atgattgttg aagcgtttgc gggtaaaagt acacttcagg taccttacga gtcgaaaggt
      961 aagggtgggt tcaaacaagc cgttcttaag ttcagggcgg taactacacg tacacgaatc
     1021 aggttcttga gtacgtttta tcaaattaaa gtcgacggtt cgctttgtgg tccgatcatc
     1081 gatgatgtta gattggtcgg tgtccgatat gctaaacatg gttaa
//
LOCUS       XM_071833006             645 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842909), mRNA.
ACCESSION   XM_071833006
VERSION     XM_071833006.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..645
                     /gene="LOC139842909"
                     /note="uncharacterized LOC139842909; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842909"
     CDS             1..645
                     /gene="LOC139842909"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689107.1"
                     /db_xref="GeneID:139842909"
                     /translation="MRSRIKDHVFEDAAGVIKWITNKGAVVSYSTSQTWDDLKTNANP
                     VPWHHVVWLAVCNRLTTQDKLLKWYPTKSFKCALCGKIEDSINHLFFECDYSAKVWND
                     VKQCLLFKGLPANLQVITHKLATYPFRNQIWDVINRLTLATAVYSIWHERNCRIFKDK
                     RRSDKDLVNCIIGGIRLKLASFKVKGTAAMAVAARNWDMDLIGNRLKMKQTSSL"
     misc_feature    85..297
                     /gene="LOC139842909"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagatcaa gaattaaaga tcatgttttt gaagatgcag caggtgtaat caaatggatt
       61 accaataaag gagctgttgt gagttattct acaagtcaaa catgggatga tcttaaaact
      121 aatgctaatc ctgttccatg gcatcatgta gtatggttag cagtttgtaa taggcttaca
      181 actcaagaca agcttttgaa atggtaccct acaaagagct tcaaatgtgc actttgtgga
      241 aaaattgagg actctatcaa tcacttgttt tttgagtgtg actattcagc taaagtatgg
      301 aatgatgtaa agcaatgcct tctgtttaag gggcttccag ctaatttaca ggtcattact
      361 cataaacttg ctacatatcc ttttagaaat cagatatggg atgtcataaa taggctcacc
      421 ttagctactg ctgtatatag catatggcat gagaggaact gtagaatttt taaagataaa
      481 agaaggagtg ataaggattt ggtgaattgc ataattggtg gaattaggtt aaaattggct
      541 tcattcaagg ttaaaggtac tgctgctatg gctgtggctg caaggaattg ggatatggat
      601 ttgattggta atcgattgaa gatgaaacag acgtcgtcac tgtga
//
LOCUS       XM_071833007             852 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842910), mRNA.
ACCESSION   XM_071833007
VERSION     XM_071833007.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..852
                     /gene="LOC139842910"
                     /note="uncharacterized LOC139842910; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139842910"
     CDS             1..852
                     /gene="LOC139842910"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689108.1"
                     /db_xref="GeneID:139842910"
                     /translation="MSERFARESLHNFCRCIIDLYANVYVREPTLHDIHRLYEGHERI
                     HGFPGMLGSIDCMHWAWAKCPVAWRGQYMRGDHSHPTIMLEAVASYNNWIWHAYFGVA
                     GSNNDINVLNTSDLFNSMLNEEMPDDPYQINGVHYSRGYYLADGIYPTWAAFVKGFSS
                     AVDEKRTYFTKKQASARKDVERTFGILQGRWHILQQPAQAYEVNIMRQLMYTCIVIHN
                     IIIEDNGYNLAENDWVVEPVQHIQHTWIDRCDARARRTRELRDREVHEGIRSDLVEHL
                     WDLRDDL"
     misc_feature    73..675
                     /gene="LOC139842910"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtctgaac gatttgctcg ggaatctcta cacaactttt gtaggtgtat cattgatttg
       61 tatgctaacg tgtacgtaag agagcctact ttgcacgaca ttcaccgttt gtatgaaggt
      121 catgaaagga ttcatggttt tccgggcatg ttgggtagta tagattgtat gcactgggca
      181 tgggcaaaat gtccagttgc gtggagagga cagtatatgc gaggtgatca cagtcaccca
      241 actattatgc ttgaagcggt cgcctcgtat aataattgga tttggcatgc gtattttggt
      301 gttgcgggtt caaacaacga tattaatgtg ctaaacacta gtgatttgtt caactcaatg
      361 cttaatgagg aaatgcccga cgatccttat caaataaatg gggttcatta tagcaggggg
      421 tattatttag ctgacggtat ttatccaact tgggcggcat ttgttaaggg attttcaagt
      481 gccgttgacg aaaaacgtac ttactttaca aagaaacaag cgagcgctcg taaagatgtt
      541 gaaagaacgt ttgggatcct acaaggccgt tggcatattc ttcagcaacc cgcacaagct
      601 tacgaagtga atataatgag acaactaatg tacacgtgca tcgtgataca caacatcatt
      661 atcgaagaca atggatacaa ccttgctgaa aatgattggg tagttgagcc cgtccaacat
      721 atacaacata cgtggatcga taggtgtgac gctcgtgcaa gaagaacaag ggagttacgt
      781 gatagagaag tgcatgaagg catacgatct gatttggttg aacatttgtg ggatcttcgt
      841 gacgacttat ga
//
LOCUS       XM_071833008             588 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842911), mRNA.
ACCESSION   XM_071833008
VERSION     XM_071833008.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..588
                     /gene="LOC139842911"
                     /note="uncharacterized LOC139842911; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842911"
     CDS             1..588
                     /gene="LOC139842911"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689109.1"
                     /db_xref="GeneID:139842911"
                     /translation="MSNNGLFSTGTLADWISSKLLLSGHNNGETLRNNLVPKEIEVFT
                     WRARKKRLPVLFELDKRGVDLNSVCCPLCDGDIESVNHSLILCKQAFDVWCKVFEWWG
                     RSGTLLLQVEDLLSDTGYARSDIGKSIWQAVMWSCSYLIWTNRNQKVFSNKCWNVPVA
                     LNEIQVKSYEWIAKRCKNKSIDWHNWLHNPQIYLL"
     misc_feature    <94..270
                     /gene="LOC139842911"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgagtaaca atggcttatt ctcaacaggt acactcgcag attggatcag ctcgaaatta
       61 ttactctcgg gtcacaacaa tggagaaacc ttgaggaaca acttggtccc gaaagagatt
      121 gaggtgttta cttggagagc gaggaagaaa cgactcccgg ttttgttcga attggataag
      181 agaggggtgg accttaattc ggtgtgttgc ccgttgtgcg atggggatat tgaatcggta
      241 aaccattcac tcatactatg caagcaagcg tttgatgtat ggtgtaaagt tttcgaatgg
      301 tggggtcgta gtggaaccct gttgctgcag gttgaagatc ttttaagtga tacgggttac
      361 gcaagatcgg atataggcaa aagtatttgg caagcagtta tgtggtcgtg tagctaccta
      421 atatggacaa accgaaacca aaaagtgttc tcaaacaagt gttggaatgt tccggttgcc
      481 ttaaacgaga ttcaagtgaa aagttacgaa tggatcgcga agagatgcaa aaataaatcc
      541 atcgactggc ataattggtt acataacccg caaatttatc ttctatag
//
LOCUS       XM_071833009             981 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842912), mRNA.
ACCESSION   XM_071833009
VERSION     XM_071833009.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..981
                     /gene="LOC139842912"
                     /note="uncharacterized LOC139842912; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842912"
     CDS             1..981
                     /gene="LOC139842912"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689110.1"
                     /db_xref="GeneID:139842912"
                     /translation="MEERKGGMALGCGSIALSTELLNTIMEQEETTAAAWSRLQSVFH
                     DNRNSRALYLHKHYSTIKLDDFANVSTYCQEIKSLADQLMNVGDKVSNERMVLQLIAR
                     LNDNFDTVETYFTQLDKLPSFYEARSKLILEETRKQKQMIHNSPDTALLAAATATHSS
                     PGWGRGYAAQGHPQAWAGYPPWNYQQTQWAQPPCPYPSINQTSSPANWTWPNTSSSNA
                     GILGPRPQANIVNPSASPGYSPTELDNALHTMTLNPSKDTWYMDMGATSHMAANSEFD
                     PFGFTVKDFPQGTPILRCNSTGELYSISTSLLQHLSSLSTFAFTALSPNV"
     misc_feature    46..420
                     /gene="LOC139842912"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atggaagaga gaaaaggtgg aatggctctt ggatgtggat ctatagcact ttcaactgaa
       61 cttctcaata ctatcatgga acaagaagaa actactgctg ctgcttggtc tcgattacaa
      121 tctgtttttc acgataacag gaattcacga gccttatatc tacacaagca ttactccaca
      181 attaagctag acgatttcgc taatgtctcg acctattgtc aagaaatcaa gtctcttgct
      241 gaccaactga tgaatgttgg ggataaggta tccaacgagc gaatggttct tcaactcatt
      301 gccagattaa atgacaactt cgacactgtc gaaacgtatt tcacacaatt agataaattg
      361 ccatcctttt atgaggcacg ttccaaatta attctggagg aaacccgaaa gcagaaacaa
      421 atgatccata actcaccaga tactgcactt ctcgccgctg ctactgcaac tcattcgtct
      481 ccaggatggg gaagaggtta tgctgcacag ggtcatccac aagcttgggc cggttaccct
      541 ccatggaact accagcaaac ccaatgggct cagccaccat gtccatatcc tagtattaat
      601 cagacatcat ctcctgcaaa ctggacctgg cccaacactt catcatcaaa tgctggtatt
      661 ttgggcccta gacctcaggc caatatcgtg aacccctctg cttctccagg ttactctccg
      721 actgaactcg ataatgcatt acatactatg acacttaatc catcgaagga cacttggtat
      781 atggacatgg gagcaacatc acatatggcc gcgaactcag aatttgatcc ttttggtttt
      841 actgtgaagg attttccgca gggcacacca atccttagat gcaacagcac tggagaactc
      901 tattccatct caacttcctt gctgcaacat ttatcttcgc tatctacttt tgcttttact
      961 gctttatctc ctaatgtatg a
//
LOCUS       XM_071833010            1110 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842913), mRNA.
ACCESSION   XM_071833010
VERSION     XM_071833010.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1110
                     /gene="LOC139842913"
                     /note="uncharacterized LOC139842913; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842913"
     CDS             1..1110
                     /gene="LOC139842913"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689111.1"
                     /db_xref="GeneID:139842913"
                     /translation="MLALCNIKWWWRFKTDQNSLWAKVITSIYGSGGGLDCANHDRTY
                     SGATTWRNIIKVGAAIDAQGIEFSSSFFKSIGSGNDTLFWEEMWVGNSKLKDSFGRLY
                     ALETDKQATVQDRINGSSGSNVFNWKWARPIRGRAHNDLDLLVGLIESITFVYGEVDK
                     WKWRLDQDGVYKSKTMALLIDDKRLGTHSSSETLLNKAVPQKIGIFVWRVKQKRIPVR
                     VELDKRGIDLDSILCPLCSNNTETVDHTLLECTKVKELWLLFFKWWNSSNANLSSLEQ
                     IFDYTSAHPGITKVSKQIWQSAKWACSYFIWRARNEVVFKNKVWNGDSILTNIQTASF
                     AWISKRLKKSNLDWSQWLINPSSFISSNHNRSGVG"
     misc_feature    <586..768
                     /gene="LOC139842913"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcttgcac tatgtaatat taaatggtgg tggcgtttca aaaccgacca aaatagttta
       61 tgggcgaaag tcattactag tatttacggg tcggggggcg gtttagattg tgctaaccat
      121 gacaggactt attcgggagc aacaacttgg agaaacatta ttaaagttgg tgctgctata
      181 gatgctcaag gaattgaatt ctcatcatcc ttcttcaaaa gcattggaag tggaaacgac
      241 accttgtttt gggaagaaat gtgggtaggc aacagcaagc taaaagactc atttggcagg
      301 ctatatgctc tcgaaacaga caagcaggct accgtccaag atagaattaa cgggtcatcg
      361 gggtcaaatg tcttcaattg gaaatgggcc aggccgatca gaggtcgagc ccataatgat
      421 ttagatctgc tcgtgggttt aatcgaaagt ataacttttg tctatgggga agttgataag
      481 tggaaatggc gtttagatca agatggagtc tacaaatcga aaacaatggc tctattaatc
      541 gatgataaaa ggctgggcac acattcttca tccgaaacac tattaaataa agcagtacca
      601 caaaaaatcg gtattttcgt ttggagagta aaacaaaaaa ggatcccggt cagagtcgaa
      661 ctcgacaaac gagggataga tttagactct attttatgtc cgttatgctc caacaataca
      721 gaaacagtgg atcatacttt attggagtgt accaaggtta aagagttatg gttgctattt
      781 ttcaaatggt ggaactcttc aaatgcaaat ttgtcttctc ttgagcagat tttcgattac
      841 acttctgccc atcctgggat cacaaaagtt agcaaacaaa tatggcagag tgctaaatgg
      901 gcttgtagct atttcatatg gagggcccga aacgaggtgg ttttcaagaa caaagtgtgg
      961 aacggggatt cgattctaac caatattcaa acggccagct tcgcttggat ctcgaaacgc
     1021 ttaaagaaat ccaacttgga ttggtcacaa tggctaatta acccgagctc cttcatctcc
     1081 tccaaccaca atagatcggg agtcggctaa
//
LOCUS       XM_071833011            1548 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842914), mRNA.
ACCESSION   XM_071833011
VERSION     XM_071833011.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1548
                     /gene="LOC139842914"
                     /note="uncharacterized LOC139842914; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842914"
     CDS             1..1548
                     /gene="LOC139842914"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689112.1"
                     /db_xref="GeneID:139842914"
                     /translation="MEGNKNSCQLRSGLYAKSKGQTSDTRPRVKKSKAPNGIRVSHDN
                     PEDQNLEGKLVSRHKKVIHEEARSLRDEETDTEPGPEYEANNDIYDGDYPFYYASKEV
                     NASTQPVMNVDQQTTQLVDESDKGERVRGPALMRKNWKQKASVRISISVNEHGQPICK
                     NSSKLTHFLGNLTRSYQYCPVYRPWNQTKFDIPQTADSWILQSYGRKMKNWRARIKEA
                     YFDPSLSMEVQLNSPAEELTKRYWRRLLEYWSRERVKAMTDKNKANRANKKLTQLTGK
                     KSFARILARFYSLHTSFGREPTRVDMFKKCFTNGSADGEAATVLKQMKELTDKVVDGE
                     TDTPGPDDVFSQVMGHNNSGSAQTYGLGVRAKDLWGIVPSRSAVRKENAQLKSDKAEL
                     ENENSRLKAQFARKNNGSGVENEGSGHQDNGSVVKRLKVRDEVYVKSITNNKVARGKL
                     VSMDPPTVVLQTELGAGWCEVELQVAIERNEVLFRPYEHMRYIHDVIGTSTAWPTALI
                     EVADFDD"
     misc_feature    724..1086
                     /gene="LOC139842914"
                     /note="Plant transposase (Ptta/En/Spm family); Region:
                     Transposase_24; pfam03004"
                     /db_xref="CDD:367291"
     misc_feature    1300..1485
                     /gene="LOC139842914"
                     /note="TNP1/EN/SPM transposase; Region: Transposase_23;
                     pfam03017"
                     /db_xref="CDD:427102"
ORIGIN      
        1 atggaaggaa acaaaaactc ttgtcagctt agatccgggt tatacgcaaa atccaagggc
       61 caaacaagtg atacgaggcc gagggttaaa aaaagtaaag ctccaaatgg aataagagtc
      121 agtcatgaca atcctgaaga tcaaaattta gagggaaagt tggtgtctag acacaaaaaa
      181 gttatacatg aagaagctag aagtcttaga gatgaagaaa cggatacgga gcccgggcct
      241 gagtatgaag ccaacaatga tatttacgat ggtgactatc ctttttatta tgcgagtaaa
      301 gaagtaaatg cgagtactca acctgtgatg aatgttgatc agcaaaccac ccaactagta
      361 gatgaatcag ataaaggcga aagagttcga ggaccagcac ttatgcgaaa aaactggaaa
      421 cagaaggcat ctgttcgaat ttcaatttct gttaatgaac atggacagcc gatttgcaaa
      481 aacagtagta aactcaccca ttttcttggt aacttaacgc ggagctacca atattgtcca
      541 gtttatagac cgtggaatca aacaaagttt gatattccac aaactgctga ttcttggata
      601 ctccagtcat atggtcgaaa aatgaaaaat tggagggcga gaataaagga agcctacttt
      661 gatccatctt tatcaatgga ggttcaattg aattcaccag ctgaagaact aaccaaaaga
      721 tattggagaa gacttcttga atattggagt agagaaaggg tgaaggcgat gaccgacaaa
      781 aataaagcca atagggctaa caagaagttg acgcaattga ccgggaaaaa aagttttgca
      841 agaattttag ctcgttttta ctcattacat acgagtttcg gaagagaacc tactcgggtc
      901 gatatgttta agaaatgttt tacaaatgga agtgctgatg gtgaagctgc aactgtactc
      961 aaacaaatga aagaacttac ggacaaagtt gtggacggtg aaactgatac acctggacca
     1021 gacgatgttt tttcccaggt aatggggcac aataattctg gttcagccca aacgtatgga
     1081 cttggcgttc gtgctaaaga cttgtggggc atagtaccta gtcgatcagc cgttcgtaag
     1141 gagaatgctc aactcaagtc tgataaggca gaacttgaga atgaaaattc aaggttaaaa
     1201 gcccagtttg ctcggaagaa taatggttct ggtgttgaga atgaaggttc gggtcatcag
     1261 gataatggtt cggttgttaa acgtttaaag gtgagagatg aagtgtatgt aaaaagcatt
     1321 acaaacaaca aggtagcaag aggaaagttg gtaagcatgg atccacctac ggttgttttg
     1381 cagacagaac ttggagctgg ttggtgtgag gtagagcttc aagtggccat cgaaagaaat
     1441 gaagttttgt ttaggccata tgagcatatg agatacattc atgacgtcat tggtacgtct
     1501 actgcttggc ctactgcgtt gattgaggtg gcagattttg atgactga
//
LOCUS       XM_071833012            1671 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842915), mRNA.
ACCESSION   XM_071833012
VERSION     XM_071833012.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1671
                     /gene="LOC139842915"
                     /note="uncharacterized LOC139842915; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842915"
     CDS             1..1671
                     /gene="LOC139842915"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689113.1"
                     /db_xref="GeneID:139842915"
                     /translation="MDSTWMSKCRSTPEFEEGLNKFFERIFSRKEIGGHIYCPCINCG
                     NLKGVDRDEAKSHLLCDGFFEGYKIPTVLLEPGDKLMWDAEDDMEGLAECIFHMFEDE
                     DEDEDDVDIPETENQSNVPDINVERFYKVLGDAKKELYPGCKFSVLSFIVRLFHSKCV
                     GKCSEKGFSMILYTMREAFPHASILKSLYEVRKLIRELGLGYEKIDACPNDCMLYWKQ
                     NKDKIICDVCQTSRYKQSNNNDSEEESTTQADNDSEYKAKKVGAKVLRYFPLIPWLQR
                     LFMSPKTSESMRWHQESRTKDGLLRHPVDSPAWKTFNHQNREFAKEPRNVRLGLATDG
                     FNPFGNMSVSHSTWPVVLIPYNLPPWLCMKKPFLFLTLLIPGPSALGNNIDVYMQPLI
                     DELKELWDIGVNTYDASTKSNFPLRACLLWTISDFPAYANLSCWSTKGKLACPSCHKE
                     TKSIRLSNSHKDIFMAHRRWLEMLHAFRFLKDAFDDTEEHEGPPRCLTWEQVLEALLT
                     ENYHTANCRTGIAAETSDAHPPTFPAHYRSEPALVAELDYDNTRVSEK"
     misc_feature    10..204
                     /gene="LOC139842915"
                     /note="Transposase-associated domain; Region:
                     Transpos_assoc; pfam13963"
                     /db_xref="CDD:433610"
     misc_feature    889..1518
                     /gene="LOC139842915"
                     /note="Transposase family tnp2; Region: Transposase_21;
                     cl29371"
                     /db_xref="CDD:475188"
ORIGIN      
        1 atggactcga cttggatgtc taaatgtaga tctacccctg aattcgaaga aggactcaac
       61 aaattctttg aacgtatttt ctctagaaag gaaataggtg gtcatatata ttgtccgtgc
      121 ataaattgcg gtaatctcaa aggggttgat cgggatgagg ctaaatcaca tctgctatgt
      181 gatggttttt tcgaaggcta taaaattcca actgtgcttc tcgaaccagg tgataaacta
      241 atgtgggatg ctgaagatga tatggaagga ttggccgaat gcatcttcca tatgtttgaa
      301 gatgaagatg aagatgaaga tgatgttgat atcccagaaa ctgaaaatca gagtaatgta
      361 ccagacataa atgttgaaag gttttataaa gtattgggag atgcaaagaa agaactatat
      421 cccggctgta agttctctgt tctttcgttc attgttaggc tcttccattc gaagtgtgtt
      481 ggaaaatgta gtgaaaaagg attcagcatg attctttaca caatgaggga agccttccct
      541 catgcttcca tactgaagtc attgtatgaa gtcaggaagt taataagaga gttgggtctt
      601 ggttatgaga aaattgatgc ttgtccaaat gattgtatgt tgtactggaa acaaaacaag
      661 gacaaaatta tatgtgacgt atgtcagacc tcaagatata aacaaagtaa caataatgat
      721 tctgaagaag agtcaaccac acaagctgat aatgatagtg agtataaagc taagaaggtt
      781 ggagcaaagg tgttgcgtta ttttccactc ataccatggt tgcaaagatt gtttatgtct
      841 cctaaaacat ccgagtccat gagatggcat caagagagtc gtacgaaaga tggtctatta
      901 agacatcctg tagattcacc agcctggaaa acattcaatc atcagaatcg tgaatttgct
      961 aaagaacctc gtaatgtgag gcttggtttg gcgactgatg ggtttaaccc ttttggaaac
     1021 atgagtgttt cacatagtac ctggcctgtt gttttgatac cgtataatct accaccatgg
     1081 ttgtgcatga aaaaaccttt tttgttccta actttactta tacctggtcc atctgctcta
     1141 ggtaataata tagacgtcta tatgcaacct ctaattgatg agttgaagga gttgtgggat
     1201 attggagtta atacttatga tgcatccaca aagagtaact tcccactgcg tgcatgtttg
     1261 ctatggacga taagtgactt tcctgcttat gcaaatttat cgtgctggag cactaaaggt
     1321 aaattagctt gtccttcttg ccataaggaa accaaatcaa tacggttatc aaactcccac
     1381 aaagatatct tcatggcaca tcgtcgctgg ttggaaatgt tgcatgcttt ccgtttttta
     1441 aaagatgctt ttgatgacac ggaagaacat gaaggcccac cccgttgttt aacatgggaa
     1501 caagtgcttg aggccctcct cactgaaaac tatcatacgg ccaattgccg tacgggtatt
     1561 gctgctgaaa cctcagacgc gcatcctcca acctttcctg ctcactatag atcggagcct
     1621 gcactcgtgg ccgaactgga ctatgataat acacgggtgt ctgagaagta g
//
LOCUS       XM_071833014             846 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139842916), mRNA.
ACCESSION   XM_071833014
VERSION     XM_071833014.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..846
                     /gene="LOC139842916"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139842916"
     CDS             1..846
                     /gene="LOC139842916"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071689115.1"
                     /db_xref="GeneID:139842916"
                     /translation="MTFTTSIDSMCLGCLGMEAEDRGFQVYVYGNVYTCLWGHVYRKL
                     TSVNVLRGLYEKLDVLGYLDVCLDLGNLSSFLGISIQRKSDGLFLNQTAYANDIISRA
                     GMTLCQPISTPVDTMGKLSSNAGDKYKDPTYFRSLAGALQYLTFTRPDIAYAVQQVCL
                     HMHDPRDIHMLAIKRIIRYIKGTVHMGLHMTRSKKHELVSYTDSDWGGCLDTRRSTSG
                     YCVFLGDNLIFWSSKRQPTISRSSAESEYRGVANVVAESYWLRNLLLELHMPLHKATL
                     VLCDN"
     misc_feature    <202..342
                     /gene="LOC139842916"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    601..>843
                     /gene="LOC139842916"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(607..618,721..729,736..738,838..840)
                     /gene="LOC139842916"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgacgttca caacttcgat tgacagtatg tgtttgggat gtttgggtat ggaagcagag
       61 gatagaggat ttcaagttta tgtttatggg aatgtgtata cgtgtttatg gggtcatgtt
      121 tacagaaaac taacttccgt taatgtgcta cgggggttat atgaaaaatt agatgtgtta
      181 ggttacttag acgtgtgcct ggatctcggt aatctaagct cattcttggg gatctcaatt
      241 caacgaaaat cagatggctt attcctcaat caaacagcct acgcaaatga catcattagt
      301 cgagcaggca tgactttatg ccaacctatt tctactcctg tagacacgat gggaaaattg
      361 agttcaaatg caggcgacaa gtacaaagat cctacatatt ttcgaagtct ggcaggggcg
      421 ttacaatatt taactttcac acgtcccgat attgcatatg cggttcaaca agtttgcttg
      481 catatgcacg acccacgaga cattcacatg ttggccatta aacgcatcat caggtatata
      541 aagggaaccg ttcatatggg gttacacatg acacgttcaa agaaacatga actggtatct
      601 tatacggact cggattgggg tggttgtctg gacacacgac gttccacctc gggctattgt
      661 gtattcttag gggacaacct tattttttgg tcctccaaac gtcaaccaac catctctcgt
      721 tcaagtgctg aatcagaata tcgaggggtg gctaacgtag tggctgaatc ctactggtta
      781 cgaaacttgt tactcgagtt acatatgcct ttacataaag ctactctggt tctgtgtgat
      841 aattaa
//
LOCUS       XR_011757452            1195 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 19b (LOC139842917), transcript
            variant X1, misc_RNA.
ACCESSION   XR_011757452
VERSION     XR_011757452.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1195
                     /gene="LOC139842917"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 19b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842917"
     misc_RNA        1..1195
                     /gene="LOC139842917"
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 19b, transcript variant X1"
                     /db_xref="GeneID:139842917"
ORIGIN      
        1 accgtctttt tcatctctct tacaccaccg tgttagggtt tatttccatt gaacatccaa
       61 acaacgacga agataaatac aaccctagat ttcacaattc actctaaaat tgaacccaaa
      121 tcaatccaat tttagtttcc acttctttca aatcagtttg taggtgaaag gtgatatggt
      181 atatcctctt acatgatact gactgatgga cctggaaagc aagaattttg gaaagggacc
      241 aaaggaactc acgggcgctg tcgatcttat acgttactat aaattgttac cccactatga
      301 gttattctgc aagaagtcac ttcctatatc aatttcagat acgcattacg ttcatcacgt
      361 tgttggagat accgaaatca gaaaaggcga agggatgcag ttggatcaac ttattcacaa
      421 cacatccttc tctagagata caaatgcacg catacaaccg tttgatctca acgttcttat
      481 ggaagctttt cagcttaggg agactgcacc tgttgacttg ccaccttctg agaaggggat
      541 gccgactata gctggaaaat cgaggagtga atcaaagcat aaaaagcaca aggataaaga
      601 acacaagaaa cacaaacatc ggcataaaga tcgaagtaaa gataaggaca aggaaaaaag
      661 gaatgataaa agtagtcatc atgacaagaa aaggaagcat gatggaattg aagatatcaa
      721 tgcctttcat atgcagaaga aaacaaagca taaaagctca aggatcgatg agattggtgg
      781 aataaagata gcagcttgaa agtagcttgt ggtaaatatt gttgctaatg atattcaaag
      841 aggttgttac gtattgttgt caagttagct gagaacagtc ccaggactaa ctaaagaggt
      901 cgagaaggtg aattcaccgt tgttgtagat ttttccgagg tacaagttga tataaaccaa
      961 aacttttttg tattagtttg tatcatagtg ggaagtttca tatttcccaa attccattcc
     1021 ttttatttag tttagtgata cattggatat tgctaattag tcatattaat ttaaagatac
     1081 tttcagttta caaacattgt atgtatatct ggtcttagta aaggatactt ttgttctttt
     1141 aataggttgg ttagttttaa gaccttgtga atacacgtca cttgcattta gatta
//
LOCUS       XM_071833015            1313 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 19b (LOC139842917), transcript
            variant X2, mRNA.
ACCESSION   XM_071833015
VERSION     XM_071833015.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1313
                     /gene="LOC139842917"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 19b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842917"
     CDS             206..799
                     /gene="LOC139842917"
                     /codon_start=1
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 19b"
                     /protein_id="XP_071689116.1"
                     /db_xref="GeneID:139842917"
                     /translation="MDLESKNFGKGPKELTGAVDLIRYYKLLPHYELFCKKSLPISIS
                     DTHYVHHVVGDTEIRKGEGMQLDQLIHNTSFSRDTNARIQPFDLNVLMEAFQLRETAP
                     VDLPPSEKGMPTIAGKSRSESKHKKHKDKEHKKHKHRHKDRSKDKDKEKRNDKSSHHD
                     KKRKHDGIEDINAFHMQKKTKHKSSRIDEIGGIKIAA"
ORIGIN      
        1 accgtctttt tcatctctct tacaccaccg tgttagggtt tatttccatt gaacatccaa
       61 acaacgacga agataaatac aaccctagat ttcacaattc actctaaaat tgaacccaaa
      121 tcaatccaat tttagtttcc acttctttca aatcagtttg taggtgaaag gtgatatggt
      181 atatcctctt acatgatact gactgatgga cctggaaagc aagaattttg gaaagggacc
      241 aaaggaactc acgggcgctg tcgatcttat acgttactat aaattgttac cccactatga
      301 gttattctgc aagaagtcac ttcctatatc aatttcagat acgcattacg ttcatcacgt
      361 tgttggagat accgaaatca gaaaaggcga agggatgcag ttggatcaac ttattcacaa
      421 cacatccttc tctagagata caaatgcacg catacaaccg tttgatctca acgttcttat
      481 ggaagctttt cagcttaggg agactgcacc tgttgacttg ccaccttctg agaaggggat
      541 gccgactata gctggaaaat cgaggagtga atcaaagcat aaaaagcaca aggataaaga
      601 acacaagaaa cacaaacatc ggcataaaga tcgaagtaaa gataaggaca aggaaaaaag
      661 gaatgataaa agtagtcatc atgacaagaa aaggaagcat gatggaattg aagatatcaa
      721 tgcctttcat atgcagaaga aaacaaagca taaaagctca aggatcgatg agattggtgg
      781 aataaagata gcagcttgaa agtagcttgt ggtaaatatt gttgctaatg atattcaaag
      841 aggttgttac gtattgttgt caagttagct gaggtgcaaa actattacca tacaaacata
      901 atcacgtcga gtaacagttt gatgtcagtt ttatccatcg atataacttc ggttttgttt
      961 ataccatttt tatattttta tttatctgca gaacagtccc aggactaact aaagaggtcg
     1021 agaaggtgaa ttcaccgttg ttgtagattt ttccgaggta caagttgata taaaccaaaa
     1081 cttttttgta ttagtttgta tcatagtggg aagtttcata tttcccaaat tccattcctt
     1141 ttatttagtt tagtgataca ttggatattg ctaattagtc atattaattt aaagatactt
     1201 tcagtttaca aacattgtat gtatatctgg tcttagtaaa ggatactttt gttcttttaa
     1261 taggttggtt agttttaaga ccttgtgaat acacgtcact tgcatttaga tta
//
LOCUS       XR_011757453            1188 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 19b (LOC139842917), transcript
            variant X3, misc_RNA.
ACCESSION   XR_011757453
VERSION     XR_011757453.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1188
                     /gene="LOC139842917"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 19b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842917"
     misc_RNA        1..1188
                     /gene="LOC139842917"
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 19b, transcript variant X3"
                     /db_xref="GeneID:139842917"
ORIGIN      
        1 accgtctttt tcatctctct tacaccaccg tgttagggtt tatttccatt gaacatccaa
       61 acaacgacga agataaatac aaccctagat ttcacaattc actctaaaat tgaacccaaa
      121 tcaatccaat tttagtttcc acttctttca aatcaggtga aaggtgatat ggtatatcct
      181 cttacatgat actgactgat ggacctggaa agcaagaatt ttggaaaggg accaaaggaa
      241 ctcacgggcg ctgtcgatct tatacgttac tataaattgt taccccacta tgagttattc
      301 tgcaagaagt cacttcctat atcaatttca gatacgcatt acgttcatca cgttgttgga
      361 gataccgaaa tcagaaaagg cgaagggatg cagttggatc aacttattca caacacatcc
      421 ttctctagag atacaaatgc acgcatacaa ccgtttgatc tcaacgttct tatggaagct
      481 tttcagctta gggagactgc acctgttgac ttgccacctt ctgagaaggg gatgccgact
      541 atagctggaa aatcgaggag tgaatcaaag cataaaaagc acaaggataa agaacacaag
      601 aaacacaaac atcggcataa agatcgaagt aaagataagg acaaggaaaa aaggaatgat
      661 aaaagtagtc atcatgacaa gaaaaggaag catgatggaa ttgaagatat caatgccttt
      721 catatgcaga agaaaacaaa gcataaaagc tcaaggatcg atgagattgg tggaataaag
      781 atagcagctt gaaagtagct tgtggtaaat attgttgcta atgatattca aagaggttgt
      841 tacgtattgt tgtcaagtta gctgagaaca gtcccaggac taactaaaga ggtcgagaag
      901 gtgaattcac cgttgttgta gatttttccg aggtacaagt tgatataaac caaaactttt
      961 ttgtattagt ttgtatcata gtgggaagtt tcatatttcc caaattccat tccttttatt
     1021 tagtttagtg atacattgga tattgctaat tagtcatatt aatttaaaga tactttcagt
     1081 ttacaaacat tgtatgtata tctggtctta gtaaaggata cttttgttct tttaataggt
     1141 tggttagttt taagaccttg tgaatacacg tcacttgcat ttagatta
//
LOCUS       XR_011757454            1190 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 19b (LOC139842917), transcript
            variant X4, misc_RNA.
ACCESSION   XR_011757454
VERSION     XR_011757454.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1190
                     /gene="LOC139842917"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 19b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842917"
     misc_RNA        1..1190
                     /gene="LOC139842917"
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 19b, transcript variant X4"
                     /db_xref="GeneID:139842917"
ORIGIN      
        1 accgtctttt tcatctctct tacaccaccg tgttagggtt tatttccatt gaacatccaa
       61 acaacgacga agataaatac aaccctagat ttcacaattc actctaaaat tgaacccaaa
      121 tcaatccaat tttagtttcc acttctttca aatcagtttg taggtgaaag gtgatatggt
      181 atatcctctt acatgatact gactgatgga cctggaaagc aagaattttg gaaagggacc
      241 aaaggaactc acgggcgctg tcgatcttat acgttactat aaattgttac cccactatga
      301 gttattctgc aagaagtcac ttcctatatc aatttcagat acgcattacg ttcatcacgt
      361 tgttggagat accgaaatca gaaaaggcga agggatgcag ttggatcaac ttattcacaa
      421 cacatccttc tctagagata caaatgcacg catacaaccg tttgatctca acgttcttat
      481 ggaagctttt cagcttaggg agactgcacc tgttgacttg ccaccttctg agaaggggat
      541 gccgactata gctggaaaat cgaggagtga atcaaagcat aaaaagcaca aggataaaga
      601 acacaagaaa cacaaacatc ggcataaaga tcgaagtaaa gataaggaca aggaaaaaag
      661 gaatgataaa agtagtcatc atgacaagaa aaggaagcat gatggaattg aagatatcaa
      721 tgcctttcat atgcagaaga aaacaaagca taaaagctca aggatcgatg agattggtgg
      781 aataaagata gcagcttgaa agtagcttgt ggtaaatatt gttgctaatg atattcaaag
      841 aggttgttac gtattgttgt caagttagct gagtcccagg actaactaaa gaggtcgaga
      901 aggtgaattc accgttgttg tagatttttc cgaggtacaa gttgatataa accaaaactt
      961 ttttgtatta gtttgtatca tagtgggaag tttcatattt cccaaattcc attcctttta
     1021 tttagtttag tgatacattg gatattgcta attagtcata ttaatttaaa gatactttca
     1081 gtttacaaac attgtatgta tatctggtct tagtaaagga tacttttgtt cttttaatag
     1141 gttggttagt tttaagacct tgtgaataca cgtcacttgc atttagatta
//
LOCUS       XR_011757455            1240 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 19b (LOC139842917), transcript
            variant X5, misc_RNA.
ACCESSION   XR_011757455
VERSION     XR_011757455.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1240
                     /gene="LOC139842917"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 19b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842917"
     misc_RNA        1..1240
                     /gene="LOC139842917"
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 19b, transcript variant X5"
                     /db_xref="GeneID:139842917"
ORIGIN      
        1 accgtctttt tcatctctct tacaccaccg tgttagggtt tatttccatt gaacatccaa
       61 acaacgacga agataaatac aaccctagat ttcacaattc actctaaaat tgaacccaaa
      121 tcaatccaat tttagtttcc acttctttca aatcagtttg taggtgaaag gtgatatggt
      181 atatcctctt acatgatact gactgatgga cctggaaagc aagaattttg gaaagggacc
      241 aaaggaactc acgggcgctg tcgatcttat acgttactat aaattgttac cccactatga
      301 gttattctgc aagaagtcac ttcctatatc aatttcagat acgcattacg ttcatcacgt
      361 tgttggagat accgaaatca gaaaaggcga agggatgcag ttggatcaac ttattcacaa
      421 cacatccttc tctagagata caaatgcacg catacaaccg tttgatctca acgttcttat
      481 ggaagctttt cagcttaggg agactgcacc tgttgacttg ccaccttctg agaaggggat
      541 gccgactata gctggaaaat cgaggagtga atcaaagcat aaaaagcaca aggataaaga
      601 acacaagaaa cacaaacatc ggcataaaga tcgaagtaaa gataaggaca aggaaaaaag
      661 gaatgataaa agtagtcatc atgacaagaa aaggaagcat gatggaattg aagatatcaa
      721 tgcctttcat atgcagaaga aaacaaagca taaaagctca aggatcgatg agattggtgg
      781 aataaagata gcagcttgaa agtagcttgt ggtaaatatt gttgctaatg atattcaaag
      841 aggttgttac gtattgttgt caagttagct gaggtgcaaa actattacca tacaaacata
      901 atcacgtcga gtaacagttt gattcccagg actaactaaa gaggtcgaga aggtgaattc
      961 accgttgttg tagatttttc cgaggtacaa gttgatataa accaaaactt ttttgtatta
     1021 gtttgtatca tagtgggaag tttcatattt cccaaattcc attcctttta tttagtttag
     1081 tgatacattg gatattgcta attagtcata ttaatttaaa gatactttca gtttacaaac
     1141 attgtatgta tatctggtct tagtaaagga tacttttgtt cttttaatag gttggttagt
     1201 tttaagacct tgtgaataca cgtcacttgc atttagatta
//
LOCUS       XR_011757456            1245 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 19b (LOC139842917), transcript
            variant X6, misc_RNA.
ACCESSION   XR_011757456
VERSION     XR_011757456.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1245
                     /gene="LOC139842917"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 19b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842917"
     misc_RNA        1..1245
                     /gene="LOC139842917"
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 19b, transcript variant X6"
                     /db_xref="GeneID:139842917"
ORIGIN      
        1 accgtctttt tcatctctct tacaccaccg tgttagggtt tatttccatt gaacatccaa
       61 acaacgacga agataaatac aaccctagat ttcacaattc actctaaaat tgaacccaaa
      121 tcaatccaat tttagtttcc acttctttca aatcagtttg taggtgaaag gtgatatggt
      181 atatcctctt acatgatact gactgatgga cctggaaagc aagaattttg gaaagggacc
      241 aaaggaactc acgggcgctg tcgatcttat acgttactat aaattgttac cccactatga
      301 gttattctgc aagaagtcac ttcctatatc aatttcagat acgcattacg ttcatcacgt
      361 tgttggagat accgaaatca gaaaaggcga agggatgcag ttggatcaac ttattcacaa
      421 cacatccttc tctagagata caaatgcacg catacaaccg tttgatctca acgttcttat
      481 ggaagctttt cagcttaggg agactgcacc tgttgacttg ccaccttctg agaaggggat
      541 gccgactata gctggaaaat cgaggagtga atcaaagcat aaaaagcaca aggataaaga
      601 acacaagaaa cacaaacatc ggcataaaga tcgaagtaaa gataaggaca aggaaaaaag
      661 gaatgataaa agtagtcatc atgacaagaa aaggaagcat gatggaattg aagatatcaa
      721 tgcctttcat atgcagaaga aaacaaagca taaaagctca aggatcgatg agattggtgg
      781 aataaagata gcagcttgaa agtagcttgt ggtaaatatt gttgctaatg atattcaaag
      841 aggttgttac gtattgttgt caagttagct gaggtgcaaa actattacca tacaaacata
      901 atcacgtcga gtaacagttt gataacagtc ccaggactaa ctaaagaggt cgagaaggtg
      961 aattcaccgt tgttgtagat ttttccgagg tacaagttga tataaaccaa aacttttttg
     1021 tattagtttg tatcatagtg ggaagtttca tatttcccaa attccattcc ttttatttag
     1081 tttagtgata cattggatat tgctaattag tcatattaat ttaaagatac tttcagttta
     1141 caaacattgt atgtatatct ggtcttagta aaggatactt ttgttctttt aataggttgg
     1201 ttagttttaa gaccttgtga atacacgtca cttgcattta gatta
//
LOCUS       XM_071833016            1133 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable mediator of RNA
            polymerase II transcription subunit 19b (LOC139842917), transcript
            variant X7, mRNA.
ACCESSION   XM_071833016
VERSION     XM_071833016.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1133
                     /gene="LOC139842917"
                     /note="probable mediator of RNA polymerase II
                     transcription subunit 19b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     Proteins"
                     /db_xref="GeneID:139842917"
     CDS             206..799
                     /gene="LOC139842917"
                     /codon_start=1
                     /product="probable mediator of RNA polymerase II
                     transcription subunit 19b"
                     /protein_id="XP_071689117.1"
                     /db_xref="GeneID:139842917"
                     /translation="MDLESKNFGKGPKELTGAVDLIRYYKLLPHYELFCKKSLPISIS
                     DTHYVHHVVGDTEIRKGEGMQLDQLIHNTSFSRDTNARIQPFDLNVLMEAFQLRETAP
                     VDLPPSEKGMPTIAGKSRSESKHKKHKDKEHKKHKHRHKDRSKDKDKEKRNDKSSHHD
                     KKRKHDGIEDINAFHMQKKTKHKSSRIDEIGGIKIAA"
ORIGIN      
        1 accgtctttt tcatctctct tacaccaccg tgttagggtt tatttccatt gaacatccaa
       61 acaacgacga agataaatac aaccctagat ttcacaattc actctaaaat tgaacccaaa
      121 tcaatccaat tttagtttcc acttctttca aatcagtttg taggtgaaag gtgatatggt
      181 atatcctctt acatgatact gactgatgga cctggaaagc aagaattttg gaaagggacc
      241 aaaggaactc acgggcgctg tcgatcttat acgttactat aaattgttac cccactatga
      301 gttattctgc aagaagtcac ttcctatatc aatttcagat acgcattacg ttcatcacgt
      361 tgttggagat accgaaatca gaaaaggcga agggatgcag ttggatcaac ttattcacaa
      421 cacatccttc tctagagata caaatgcacg catacaaccg tttgatctca acgttcttat
      481 ggaagctttt cagcttaggg agactgcacc tgttgacttg ccaccttctg agaaggggat
      541 gccgactata gctggaaaat cgaggagtga atcaaagcat aaaaagcaca aggataaaga
      601 acacaagaaa cacaaacatc ggcataaaga tcgaagtaaa gataaggaca aggaaaaaag
      661 gaatgataaa agtagtcatc atgacaagaa aaggaagcat gatggaattg aagatatcaa
      721 tgcctttcat atgcagaaga aaacaaagca taaaagctca aggatcgatg agattggtgg
      781 aataaagata gcagcttgaa agtagcttgt gaacagtccc aggactaact aaagaggtcg
      841 agaaggtgaa ttcaccgttg ttgtagattt ttccgaggta caagttgata taaaccaaaa
      901 cttttttgta ttagtttgta tcatagtggg aagtttcata tttcccaaat tccattcctt
      961 ttatttagtt tagtgataca ttggatattg ctaattagtc atattaattt aaagatactt
     1021 tcagtttaca aacattgtat gtatatctgg tcttagtaaa ggatactttt gttcttttaa
     1081 taggttggtt agttttaaga ccttgtgaat acacgtcact tgcatttaga tta
//
LOCUS       XM_071833017            1050 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842918), mRNA.
ACCESSION   XM_071833017
VERSION     XM_071833017.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1050
                     /gene="LOC139842918"
                     /note="uncharacterized LOC139842918; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842918"
     CDS             1..1050
                     /gene="LOC139842918"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689118.1"
                     /db_xref="GeneID:139842918"
                     /translation="MWRILSYDIHNRNPTVISLAFHLEDQHSVMFDEQDLLDNVLHDP
                     SINASMFLEWMKCNQRYEEARQLTYLDFPTRFVWNKDTKLWTLRKKFTGSIVRIHHVS
                     PQTGELFYMRILLNKVKGPTSYEDIKTVEGNICSTFKETCYEMGLLDDDQEYINAIKE
                     SFCHILPNNNLAGLVRRAKLIIWDEAPMVKKICVETLDRTFRDIFRSTNPNSMETPFG
                     GKVIVFGGDFRQILPVITKGKRENIVAATLNSSYIWDHVTVQRLTVNMRLSVGPSIES
                     DQDNRKNVEEILNFADWLLKIGNGDVNLTEYGISEIEMLDDVLVNDVEDPIGSIISSV
                     YPDYLNNLGNPTYYQ"
     misc_feature    <463..>1047
                     /gene="LOC139842918"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; Region: DEAD-like_helicase_N; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 atgtggagaa tactatctta tgatatacat aatagaaatc cgactgttat aagtcttgca
       61 tttcatttgg aagatcaaca ctctgttatg tttgatgaac aagacttact tgataatgtt
      121 ttacatgatc cttctattaa tgcttccatg tttcttgaat ggatgaaatg taatcagcgt
      181 tacgaagaag cacgtcaatt aacatatctt gactttccta caagatttgt ctggaacaaa
      241 gataccaaac tctggactct taggaaaaaa ttcaccggct caatagtccg cattcatcat
      301 gtgtcacctc aaacgggtga actgttttac atgaggattt tgttgaacaa agtcaaaggt
      361 cctacttctt atgaggatat taaaacagtt gaaggtaata tttgttctac tttcaaagaa
      421 acttgctacg aaatgggatt actagacgat gatcaagaat atattaatgc aatcaaagag
      481 agcttttgtc atattttgcc taacaacaac ttagcaggat tagtacgtag agctaaattg
      541 attatatggg atgaagcacc aatggttaaa aaaatatgtg ttgaaacatt ggatcgtaca
      601 tttagagata tttttcgatc aactaatcct aatagcatgg agactccttt tggaggtaag
      661 gttatagttt ttggcggaga ttttagacaa atcttaccag ttattacaaa aggcaaacgc
      721 gagaatatag tagctgcaac actaaattct tcatacattt gggatcatgt tactgtacaa
      781 cgactaacag ttaacatgcg actttctgtt ggcccatcaa ttgaatctga tcaggacaat
      841 aggaaaaatg ttgaagaaat tcttaatttt gctgattggt tactgaaaat aggtaatggt
      901 gatgtaaatc taacggaata tggaatatct gaaattgaaa tgcttgacga tgtgttggtc
      961 aatgatgtgg aagatcctat cggatccatt atttcatcag tatatccaga ctatttgaat
     1021 aacctaggaa atcctaccta ttatcagtaa
//
LOCUS       XM_071833018             495 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842920), mRNA.
ACCESSION   XM_071833018
VERSION     XM_071833018.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..495
                     /gene="LOC139842920"
                     /note="uncharacterized LOC139842920; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842920"
     CDS             1..495
                     /gene="LOC139842920"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689119.1"
                     /db_xref="GeneID:139842920"
                     /translation="MGNILNSHAEYSWQCALEDDMEFSVSGTRLFIDDRISPTNQISI
                     RWLKCIPRKIYTFLWRVTLDRLPTRINLSSRGVDVEGVTLDRLPTRINLSSRGVDVVD
                     IGCAVCSLGIESSDHVLFGCDLAMELWRKCRKWVNIPMPMFTKWSAFVDWFDGFMGGV
                     QVKL"
     misc_feature    67..384
                     /gene="LOC139842920"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggtaaca tactgaattc gcatgccgag tactcatggc aatgcgcgtt agaagatgac
       61 atggagtttt ctgttagcgg aacaaggttg ttcatagacg atcgaatttc acctactaac
      121 caaatctcta taagatggtt gaaatgtatt cctagaaaaa tttatacttt tctatggcgg
      181 gtgactctag atagattacc aacgcgtatt aatctttctt caagaggggt tgacgtagag
      241 ggggtgactc tagatagatt accaacgcgt attaatcttt cttcaagagg ggttgacgta
      301 gtggatattg gttgcgccgt atgttcattg ggcattgaat cgtctgatca tgttttgttt
      361 ggttgtgatc ttgcaatgga gctttggcgt aaatgcagga aatgggtcaa cataccaatg
      421 ccgatgttta caaagtggtc cgcgttcgta gactggtttg atgggttcat gggtggagtg
      481 caagtgaagc tttga
//
LOCUS       XM_071833019            1968 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842921), mRNA.
ACCESSION   XM_071833019
VERSION     XM_071833019.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1968
                     /gene="LOC139842921"
                     /note="uncharacterized LOC139842921; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139842921"
     CDS             1..1968
                     /gene="LOC139842921"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689120.1"
                     /db_xref="GeneID:139842921"
                     /translation="MSKWYDMRKRLKLKETIEKVQYEQLMKERDYWMQVLLRIVGVVK
                     FLAKHSLAFCGSKEKLYQKGNGNFLGLIEMLEEFDPIIKEHVRRITNYETHVHYLGHK
                     IQNELILMLGDEIKKQIIKEVKEAKYYSIILDYTPDSSNQEQMSMIVRYVKFTSKSVV
                     VEESFLGFLNVNDTTGKDLFDITLEELKRIGLDVNDMRGQGYDNGANMKGIHQGVQMR
                     FLKENPRAFYTPCGCHSLNLTLCDMANSCVKGKNFFGQIQCIYTTFHNSINRWEILKH
                     NVKDLTVKPLSQTRWESRVECLKAIKTQLVDIREALLEVGEKDKDAVIASEANSIAEK
                     ELGVFDFLVSIVIWYQVLNEVNIVSKTLQSKDMNIEIAIKEINRLIEYFKDYRETGFT
                     KAIDEAKEIAIKMDVDPVFLEKRVIHKKKRFDESSSSQDVSFTPEEAFRVNYFLYIVD
                     KAILSLETRFDQFKNYEKLFGFLFPHNLRGIEDKDLKLFCNELENKLKYEGKSDINGH
                     ELYMELKSFDIIGAGEFKNPLDILTHLNEAQEYFSNARIAYRILLTIPVTVASAERRF
                     SKLKLLKNYLRSTMSQQRLSGLAMITIENEILESINCEDIIKQFATKNARRASKIIAY
                     IILSGLGALFLRIVQGTQILGTGPAATSSKK"
     misc_feature    43..642
                     /gene="LOC139842921"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    1525..1791
                     /gene="LOC139842921"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atgagcaaat ggtatgatat gcgtaaaaga ttgaagttga aggaaacaat tgaaaaagtt
       61 caatatgaac aattgatgaa agaaagagat tactggatgc aagtcctttt gagaatcgtt
      121 ggagtagtga aatttctagc taaacatagt ttagctttct gtggatcaaa ggaaaagttg
      181 taccaaaaag gtaatggaaa ttttttgggt ctaattgaaa tgttggaaga gtttgacccg
      241 attattaaag agcatgtgcg acgaatcact aattatgaga cacatgtgca ttatcttggg
      301 cacaagatcc aaaacgagct aattcttatg ttgggtgatg aaattaaaaa acaaatcata
      361 aaggaggtaa aggaagcaaa gtattactca attatacttg attatactcc cgattcaagt
      421 aatcaagaac aaatgagcat gatagtgagg tatgtaaagt ttacatctaa atctgttgtt
      481 gttgaggagt cttttttagg gtttttgaat gttaatgaca ccacgggaaa agatctattt
      541 gatattacac ttgaggagtt aaagcgtatt ggtcttgatg taaatgatat gcgtggtcaa
      601 ggatatgaca atggtgcaaa catgaaagga atacatcaag gagtgcaaat gaggttttta
      661 aaggagaacc ctagagcatt ttacactcct tgtggttgtc attcacttaa tcttacatta
      721 tgtgatatgg ctaatagttg tgttaaggga aagaactttt ttggacagat tcaatgtata
      781 tatactactt ttcataattc tattaatcgg tgggaaattt tgaaacataa tgttaaagat
      841 ttgactgtta agccattgtc tcaaacgcgt tgggaaagtc gtgttgagtg tcttaaagcc
      901 attaaaacgc aacttgtcga catacgagaa gctttacttg aagttggaga aaaagataaa
      961 gatgctgtaa ttgctagtga agcaaattca atagcagaaa aagaacttgg tgtatttgac
     1021 tttttagtat caattgtcat ttggtaccaa gtattaaacg aggtgaacat tgtgagcaaa
     1081 acattacaat caaaagatat gaatatcgag attgctatca aagaaataaa cagattgatt
     1141 gagtacttca aggattacag agaaactggt tttacaaaag ctattgatga agctaaggag
     1201 attgcaatta aaatggatgt tgacccagta tttctagaaa aacgtgtaat tcataagaaa
     1261 aaaagatttg atgagagttc aagtagccaa gacgtttcat ttacacctga agaggctttt
     1321 agagtaaatt atttcttata cattgtggat aaagctattc tttctcttga aacaagattt
     1381 gatcaattta aaaattatga gaagttattt ggtttcttat ttccgcataa cttgagggga
     1441 attgaagata aagatctaaa gttgttttgt aacgaattgg aaaataaact taagtatgaa
     1501 ggaaaatcgg atatcaatgg tcatgaactt tatatggagt tgaagtcatt tgacataata
     1561 ggagccggtg aatttaagaa tcctttagat attctaacgc atttgaatga ggctcaagaa
     1621 tatttttcaa acgcaaggat tgcatataga atattattga ctattccagt tacagtagca
     1681 tctgcggaaa ggagattttc aaagctaaag ttattgaaaa attacctacg gtcgacaatg
     1741 tctcaacaaa gactgagtgg attggcgatg ataactatcg agaatgaaat tttagagagt
     1801 ataaactgtg aagatataat taaacaattt gctaccaaga atgcgaggag agcttcaaaa
     1861 atcattgctt atattattct ttcgggtctt ggggcccttt ttcttcgcat cgttcagggc
     1921 actcaaattc tcgggaccgg ccctgccgct acatcatcaa aaaagtga
//
LOCUS       XM_071833021             591 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842922), mRNA.
ACCESSION   XM_071833021
VERSION     XM_071833021.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..591
                     /gene="LOC139842922"
                     /note="uncharacterized LOC139842922; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842922"
     CDS             1..591
                     /gene="LOC139842922"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689122.1"
                     /db_xref="GeneID:139842922"
                     /translation="MAPKQLSGCQKRKRKRLDDDMKKSQAGALEKYLSKPTLEEHEHV
                     QVNLEETEGQKHIDEQEAEIDEHVETNINEEDVIHNIVDIFDPRNWEGLNSDEIKLVV
                     EKGPKRDNNIEFGPYTKKRRFCATLYTRTLSNLEKCDRPWLVYSKELDKIFCFCCKVF
                     RKGQPRGGLAGNGFRNWLNAPKNSEYMKVPRFILKI"
     misc_feature    355..>531
                     /gene="LOC139842922"
                     /note="zinc finger in transposases and transcription
                     factors; Region: ZnF_TTF; smart00597"
                     /db_xref="CDD:214739"
ORIGIN      
        1 atggcgccta aacaattatc cggttgtcaa aaacgtaaga gaaaaagact agacgatgat
       61 atgaaaaaat ctcaagctgg tgcactagaa aagtatttga gtaaaccgac tcttgaagag
      121 cacgagcatg tacaagtaaa tctagaagaa actgaagggc aaaagcatat tgatgaacaa
      181 gaggcggaaa tagacgaaca cgttgagaca aatataaacg aagaagatgt gatacataac
      241 attgttgata tatttgaccc gagaaattgg gaaggactta attctgatga gattaaactt
      301 gtggttgaga agggtcctaa aagagataat aacatagagt ttggtccgta taccaaaaag
      361 agaaggtttt gtgcaacttt atacacaaga actttatcaa atttggagaa gtgtgaccga
      421 ccatggctag tatattcaaa agagctagac aaaatatttt gtttttgttg taaagtcttt
      481 agaaaagggc agccgagagg tggtttggcc gggaatggtt ttagaaattg gttaaatgct
      541 ccgaaaaact cagaatacat gaaagtaccc cggttcatct tgaaaatatg a
//
LOCUS       XM_071833022             363 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg01250-like (LOC139842923), mRNA.
ACCESSION   XM_071833022
VERSION     XM_071833022.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..363
                     /gene="LOC139842923"
                     /note="uncharacterized mitochondrial protein
                     AtMg01250-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139842923"
     CDS             1..363
                     /gene="LOC139842923"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg01250-like"
                     /protein_id="XP_071689123.1"
                     /db_xref="GeneID:139842923"
                     /translation="MRNLGFGEKWVKWISSCLSSTSISVLVNGSPTTEFKSEKSVRQG
                     EPISSLLFIIAAEGLNMMVKKAIDLESIKGVKVGRNGVFVSHLQYADDMILFGEWNET
                     NALSIMKLLKCLALGPQS"
     misc_feature    <121..>333
                     /gene="LOC139842923"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    130..132
                     /gene="LOC139842923"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgaggaatt taggcttcgg cgaaaaatgg gttaaatgga ttagtagttg cctttcttcc
       61 acttctattt cggttttagt aaacggttca ccaacgaccg aatttaaatc ggaaaaaagt
      121 gtaagacaag gcgaaccgat ttcttctctc ctattcatta tagccgccga aggtttaaac
      181 atgatggtca aaaaagcaat cgatctagaa agcatcaaag gtgtaaaagt tggtagaaat
      241 ggtgtttttg tttcacacct tcaatacgcc gatgacatga tcttattcgg ggaatggaac
      301 gaaacaaatg ctcttagtat catgaaatta ctcaaatgct tagctctcgg gcctcaaagt
      361 taa
//
LOCUS       XM_071833023             426 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842924), mRNA.
ACCESSION   XM_071833023
VERSION     XM_071833023.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..426
                     /gene="LOC139842924"
                     /note="uncharacterized LOC139842924; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842924"
     CDS             1..426
                     /gene="LOC139842924"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689124.1"
                     /db_xref="GeneID:139842924"
                     /translation="MEYGTTPDIEYLRKPIAEDIDRLYNFHAQKHGLPGMFGSIDYAN
                     NDINALNYSPFNTIKDGTAPPSPFDVNGRHYEKGYYLGDGIYPDRAMLVKAPHNPTDE
                     PCKKFKRFQESARTDIERAFGVLHGRFAMLKAPARSLDF"
     misc_feature    28..420
                     /gene="LOC139842924"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggagtatg gaactacgcc tgatatagag tatttgcgaa aaccaattgc cgaagatatt
       61 gatcggcttt ataattttca cgcacaaaaa catggtttac cgggtatgtt tggtagtatt
      121 gattatgcga acaacgacat taacgcttta aattattcac cgttcaacac tataaaagat
      181 ggcactgctc caccttcacc atttgatgta aacggacgtc actacgagaa agggtattac
      241 ctaggtgatg gtatataccc agatagggct atgttggtca aagcgcccca taatccaact
      301 gacgaaccat gtaaaaagtt taaacggttt caagaaagtg caaggacgga tattgagcgt
      361 gcatttggag tattacatgg tagatttgca atgttaaaag ctccggcgag atctttggac
      421 ttttag
//
LOCUS       XM_071833025            1191 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides rop guanine nucleotide
            exchange factor 12-like (LOC139842926), mRNA.
ACCESSION   XM_071833025
VERSION     XM_071833025.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1191
                     /gene="LOC139842926"
                     /note="rop guanine nucleotide exchange factor 12-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 27 Proteins"
                     /db_xref="GeneID:139842926"
     CDS             1..1191
                     /gene="LOC139842926"
                     /codon_start=1
                     /product="rop guanine nucleotide exchange factor 12-like"
                     /protein_id="XP_071689126.1"
                     /db_xref="GeneID:139842926"
                     /translation="MVRAAEEDENVNSGSGDEVGTTNNIDENQCLYMEMMKEKFAKLL
                     LGEDMSGGGKGVSSALALSNAITNLAAAVFGEQSRLEPMPPERKARWRREMDLLLSVT
                     DHIVEFVASKQNTNGVNMEVMVTRQRSDLHMNIPALRKLDAMLIECLDNFEGDHEFTY
                     ASKNDNEAKSMKKREEDKWWLPTPKVPPDGLSDATRKWLQFQKDSVHQVLKAALAINA
                     QILMEMEVPESYTETLPKNGRASLGDNIYKSITDEHFDPDSFLSAIDLTTDHKIVDLK
                     SRIEASDVIWKRKITAKDGRSGWGSGVSLEKRELFGDRAQTILLILKQRYPGIPQTTL
                     EISKIEHNRDVGLAILESYSRILESLAHKVLSRIEDVQHADAITQSPSSRSLKMNSLK
                     DSLG"
     misc_feature    97..1140
                     /gene="LOC139842926"
                     /note="PRONE (Plant-specific Rop nucleotide exchanger);
                     Region: PRONE; pfam03759"
                     /db_xref="CDD:427490"
ORIGIN      
        1 atggttcgag cagccgagga agatgaaaat gtgaattctg gatcaggtga tgaagttggc
       61 accacaaaca acattgatga aaaccaatgc ttatacatgg agatgatgaa ggaaaagttt
      121 gctaaattgc ttttaggtga agatatgtct ggcggaggaa aaggcgtttc atccgctttg
      181 gctctatcaa atgccatcac taatttagca gctgctgttt ttggggaaca atcgcgatta
      241 gaaccgatgc cgccagaaag aaaagcaagg tggagaaggg aaatggattt gttattatct
      301 gttaccgatc acattgttga atttgtagcc tcaaagcaaa acactaatgg tgtaaacatg
      361 gaggttatgg ttaccaggca acgaagcgac cttcatatga acattcctgc attaaggaag
      421 ctcgatgcga tgctcattga atgtctagat aacttcgaag gtgatcacga gtttacgtat
      481 gcatctaaaa atgacaatga agcaaaaagt atgaaaaaga gggaagagga taaatggtgg
      541 ttaccgactc caaaggtacc tcctgatggt ttatcagacg ctacaagaaa atggttgcag
      601 tttcagaaag actctgttca ccaagtgctc aaagcggccc tcgctattaa tgcccagatt
      661 cttatggaga tggaggtccc agaaagctat actgaaactc ttccaaagaa cgggcgtgca
      721 agtttgggag acaatatata caaaagtatt actgatgagc attttgatcc agatagcttc
      781 ctttctgcta tagatttgac tacagatcat aaaattgttg acctcaaaag tagaattgag
      841 gcgtctgacg ttatatggaa acgaaagatt actgctaaag atggacggtc tggatggggt
      901 tcaggtgtga gtttggagaa gagagaacta tttggagata gagcacaaac gattttactt
      961 atacttaaac aacgttaccc tggcattcct caaactacac tagaaatcag caaaatcgaa
     1021 cataaccgag atgttggact tgctattctt gaaagctatt caagaattct tgaaagtttg
     1081 gctcataaag tattatcacg tatagaagat gtacaacacg cagatgctat tacacaaagt
     1141 ccgtcttcac ggagtttgaa aatgaactct cttaaagatt cattaggtta g
//
LOCUS       XM_071833026             906 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842927), mRNA.
ACCESSION   XM_071833026
VERSION     XM_071833026.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..906
                     /gene="LOC139842927"
                     /note="uncharacterized LOC139842927; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842927"
     CDS             1..906
                     /gene="LOC139842927"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689127.1"
                     /db_xref="GeneID:139842927"
                     /translation="MASCLLASDFDSEDVRVMQLIQELDEESEVESVPRIPRVRGYIP
                     RDHESAAQRLWNDYFTDAYPAKKFKRRFRMRINLFLHIAQGITTFNGTYIPEHFDFFR
                     ERNDALGRQSFTTLQKCTSAIRQLAYGLSPDAFDEYLHMSSNNDINVLNRSSIFDALK
                     KGIDPSASFEVNGHQYTKGYYLADGIYPDWATLIKGISCPTDEPRIKFTRFQASARKD
                     IERAFGVLQGRIHILSQPSRTLKKRNAVLPLVKDMYLYLHNLYYSFVIRVQNFYMATY
                     LLCNFRPPRHCMSDIRGSGMFILNE"
     misc_feature    <424..780
                     /gene="LOC139842927"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggcgtcat gtttactagc ttccgatttc gattcggagg atgttcgtgt tatgcaacta
       61 attcaagaat tggacgaaga gtccgaagtc gaatccgttc ctcgtattcc tagagttcgt
      121 ggatacattc cgagagatca tgagtcagca gcgcaacgtc tttggaacga ttacttcacc
      181 gacgcatatc cggctaagaa atttaaaagg cgatttcgaa tgcgcataaa cttatttcta
      241 catatagctc aaggtataac tacatttaat ggtacttata ttcctgaaca tttcgatttt
      301 tttagagaaa gaaatgatgc acttggtagg caatcgttta ctactttaca aaagtgtact
      361 tcggctatac gtcaattggc ttatggatta agccccgatg ctttcgatga atatttacat
      421 atgagttcca acaatgatat taatgttttg aatcggtcat cgatttttga tgcactaaag
      481 aagggaatag atccatctgc atcatttgag gttaatggtc atcaatacac caaaggttat
      541 taccttgccg atggtatata tcctgattgg gcgacactga tcaaaggaat atcgtgcccc
      601 acagatgaac caaggattaa gttcacgaga tttcaagcaa gtgcacgaaa ggacatagag
      661 agggcttttg gtgttcttca agggcgaatt catattttaa gtcaaccttc acggactttg
      721 aaaaagagaa atgctgtttt acctttggtg aaagatatgt atctgtattt gcataatttg
      781 tactatagtt ttgtgatacg agttcagaac ttttacatgg ctacttacct cttatgtaac
      841 ttcagaccac cgaggcattg catgagtgat atacgaggaa gcggcatgtt tatccttaac
      901 gagtag
//
LOCUS       XM_071833027            1764 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein NRT1/ PTR FAMILY
            1.2-like (LOC139842928), mRNA.
ACCESSION   XM_071833027
VERSION     XM_071833027.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1764
                     /gene="LOC139842928"
                     /note="protein NRT1/ PTR FAMILY 1.2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 Proteins"
                     /db_xref="GeneID:139842928"
     CDS             58..1764
                     /gene="LOC139842928"
                     /codon_start=1
                     /product="protein NRT1/ PTR FAMILY 1.2-like"
                     /protein_id="XP_071689128.1"
                     /db_xref="GeneID:139842928"
                     /translation="MGEQMNHQTQLSTTKKGGLRTMPFIIANEAFEKVASYGLMPNMI
                     VYLMKDYNIGVSKGTNILFLWTAASNFAPVLGAFFSDSYLGRFLTIGLGSLFSLLGML
                     LLWLTTMVPQLKPPPCNQLAEPCKPPTQSQFAFLILGFIFISLGAGGVRPCSLAFGAE
                     QIDKRNNPNNERALECFFGWYYAASAIALLVAFTGIVYIQDHVGWKVGFGVPVILIFL
                     AVVLFFVASSLYIKTKVKKSIFTSFLQVIVVAYKNRKVVVGPTNRWHHLRKDSNAMPT
                     KRLGFLNKACIIQNPKDVTPDGIATNPWCLCTIEQVEELKSLIRVLPLWSSGLMMSIN
                     VSQSSFPVLQANTMDRRLGSSTFQIPAGSFAFFTIAMIAIWVLLYDRLIIPFASKILN
                     KQVHLGVKLRMGIGLVLSTLAMVVSASVEHVRRKKAIEQGLVNDPKSVINMSAMWLIP
                     QYCLHGLAEAFNAIGQNEFYYSEFPKSMSSIAASLFLLGMAVANLLASLILTMVEKLT
                     RGNSKEGWITTNINQGRYDCYYWILALMSFVNLFYFVACSWAYSPRADEKVKGERSED
                     PE"
     misc_feature    121..1710
                     /gene="LOC139842928"
                     /note="NRT1/PTR family (NPF), subfamily 1 and 2 of the
                     Major Facilitator Superfamily of transporters; Region:
                     MFS_NPF1_2; cd17416"
                     /db_xref="CDD:340974"
     misc_feature    order(151..156,163..168,175..177,274..276,496..501,
                     505..513,520..522,601..603,610..615,622..624,1039..1041,
                     1048..1053,1060..1065,1072..1074,1171..1173,1183..1185,
                     1429..1434,1444..1446,1456..1458,1504..1506,1513..1518,
                     1525..1530,1537..1539)
                     /gene="LOC139842928"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:340974"
ORIGIN      
        1 cccacacata ttttgttgtg ggtgagacag aaataacatt accattgagg atttaaaatg
       61 ggggagcaaa tgaatcatca aacacaactc tcaacaacaa agaaaggtgg tttaagaaca
      121 atgcctttca tcatagcaaa tgaggcattt gagaaggtgg caagctatgg tttgatgcca
      181 aatatgatag tctatttgat gaaggattac aatattggtg tatctaaagg cacaaacata
      241 ctctttctgt ggacagcagc ttcaaacttt gcaccagttt taggggcatt tttctctgat
      301 tcatatttgg gtcgcttcct caccattggt ttgggttctc ttttttctct tctggggatg
      361 ttgttactat ggttaacaac aatggttcca caactaaagc cacctccttg caaccaatta
      421 gccgaaccct gcaaaccacc gacacagtct caatttgctt tcttgatttt gggcttcatt
      481 ttcatttctt tgggagctgg aggtgttaga ccatgttcat tagcatttgg tgcagaacaa
      541 attgacaaaa gaaacaatcc aaacaatgag agggcattag aatgcttttt tggttggtat
      601 tatgctgcta gtgcgattgc attgcttgtt gcgtttaccg gcattgttta catacaagat
      661 catgttggat ggaaggtcgg ttttggtgtt ccggtgatcc tcattttctt agcggtcgtt
      721 ttgttctttg tagcttcttc tctatacatt aagactaaag ttaaaaagag catatttaca
      781 agcttcttac aagtgattgt tgttgcttat aagaaccgta aggtggtcgt gggacctaca
      841 aaccggtggc atcatcttcg taaagattca aacgccatgc ccaccaagag actcgggttt
      901 ttaaataaag cttgcataat tcagaatccg aaagatgtaa ccccagatgg tatagctaca
      961 aatccatggt gtctatgtac gatcgagcaa gttgaagagc taaaatcact cattcgcgtt
     1021 ctaccattgt ggtcatcagg gctcatgatg tcgataaacg taagtcaatc atcttttccg
     1081 gttctccaag cgaataccat ggatcgacgt ctaggatcat caacctttca aattccagct
     1141 ggatcgttcg cttttttcac catcgcgatg atcgcaattt gggttctttt atacgaccgc
     1201 ttgattatcc catttgcatc aaaaatttta aacaaacaag ttcatcttgg agttaaatta
     1261 agaatgggca ttggtcttgt tctttcaaca ttggccatgg tagtatctgc aagtgttgaa
     1321 catgttcgac gaaaaaaagc aattgaacaa ggacttgtaa acgatccaaa aagcgtcata
     1381 aatatgtcag caatgtggct tattccacaa tattgcttac atggattagc agaggcgttt
     1441 aatgcaatcg gacaaaacga gttttattac tcagagttcc ctaaaagtat gtcaagtatt
     1501 gcagcttcac ttttcttgct tggtatggct gtggctaatt tgttggctag tttaatacta
     1561 accatggttg aaaagttaac tagaggtaac tccaaagaag gatggattac taccaacatt
     1621 aaccaaggac gttacgattg ttactattgg attcttgcgc taatgagttt cgtgaacctg
     1681 ttctactttg ttgcttgtag ttgggcttac agtcctcgtg cagacgaaaa ggtaaaaggc
     1741 gagcgtagcg aggaccccga atga
//
LOCUS       XM_071833028            2148 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842929), mRNA.
ACCESSION   XM_071833028
VERSION     XM_071833028.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2148
                     /gene="LOC139842929"
                     /note="uncharacterized LOC139842929; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842929"
     CDS             1..2148
                     /gene="LOC139842929"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689129.1"
                     /db_xref="GeneID:139842929"
                     /translation="MAMLLKVDFEKAFDSISWEFLVSMLSNLGFGRRWILWIKGCLNS
                     TFASVLVNGSPTEEFKIGRGLRQGDPLSPLLFIICMEGLHVAMLDAIDHGLYKGLRVG
                     NVASSCLMSHSFFADDALFIGEWSDINIRNLIDILKCFYLVSGLQINVHKSNILGIGV
                     PSSELNRVANAFGCKPASFPFSYLGIPIGANMRLLENWKPIVDKVDKRLRTWKVKLLS
                     FGGRLTLIKSVLGGLGTYFFSIYKVPKGILKHLESLRANFLWGSSNEDRKIHWINWDT
                     ILKRKEKGGLGVVSFDSLNKALLYKWRWRYLTCLDWPWVRVVKVIHGDQPDGLNPCVH
                     RLTNGAWANINRTLLKLHSVFPSVESCLRIKIGDGCKTSFWHDKWAIDTSLKEWCWRR
                     NIRSGTETQQLFDMLSAISHVYFSSSSDSWVSNLSADGSFSVNKFRRIIDVDPSESCL
                     TVWCKNIPPKVNFFIWRAGLNRLPDKCNLLKKGVVLQNVLCSSCSLDAEDLQHIFFEC
                     VIASQVWTYIATWIEVSIPKWNALDDLWNWIRTAHQKHTDRIIIEVICYATLWTLWPD
                     GADAVADTDATTGAYNVCCVDDVGGTVEAVADSGRAVGAADGADAVANTDATTSAYNA
                     CCVDDIGGTVEAVADSGSAVGAGDIVAVDLPSYDFDFPPLLGLLPLSPPLHHIKRNIK
                     SNVSVPHVPYYLTSTCITPEFFFFFSLFLGNTQ"
     misc_feature    <4..564
                     /gene="LOC139842929"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; Region:
                     RT_nLTR_like; cd01650"
                     /db_xref="CDD:238827"
     misc_feature    <13..921
                     /gene="LOC139842929"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; Region: YkfC; COG3344"
                     /db_xref="CDD:442573"
     misc_feature    order(22..39,199..204,343..345,349..354,550..555)
                     /gene="LOC139842929"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     misc_feature    order(22..39,199..201,349..351)
                     /gene="LOC139842929"
                     /note="putative NTP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238827"
     misc_feature    202..204
                     /gene="LOC139842929"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:238827"
     misc_feature    <1354..1542
                     /gene="LOC139842929"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcaatgc ttctaaaagt tgactttgag aaggcttttg actcgattag ttgggaattc
       61 ttagtctcta tgttatctaa tcttggtttt gggcgtagat ggattctttg gattaaagga
      121 tgtctcaact cgacttttgc ttcggttctt gtcaatggta gtcccacgga ggagtttaaa
      181 atcggacgcg gccttagaca aggagacccg ttgtctcccc ttcttttcat catttgcatg
      241 gaaggattac atgttgcaat gttggatgct attgatcatg gcctttacaa aggccttcga
      301 gttggaaatg ttgcatcctc ctgtctaatg tctcacagtt tttttgcaga tgacgctctc
      361 ttcattggcg aatggagtga tattaatatc aggaatttaa ttgatattct gaaatgcttt
      421 tacttggttt caggtttaca aattaatgtt cataaatcga acattcttgg tataggtgtt
      481 ccttcgagtg agctcaatcg cgtagctaat gctttcggtt gcaaacctgc ttccttccca
      541 tttagctact tgggtatacc catcggtgca aacatgagat tgctagaaaa ttggaagcca
      601 attgtcgaca aggtagataa acgcctccga acttggaaag ttaaacttct ttcatttggt
      661 ggtcgattaa ctttaattaa atcggttctc ggggggcttg gtacgtattt tttctccatc
      721 tataaagtcc ctaaaggtat tcttaaacac ctagaatctt tacgggccaa ctttctttgg
      781 gggagttcta atgaggatcg taagattcat tggataaact gggataccat acttaaaaga
      841 aaagaaaaag gtggtcttgg agtagttagc tttgattctt tgaacaaagc tcttctatat
      901 aaatggcgat ggagatacct tacatgcctt gattggcctt gggttcgtgt tgttaaagta
      961 atccatggtg atcaacccga tggtttaaac ccttgtgttc atcgattgac taatggggct
     1021 tgggctaata taaatcgtac gcttttgaaa ttacattcgg ttttcccctc tgttgaaagc
     1081 tgcctacgca tcaaaatcgg agatgggtgc aagacctctt tttggcacga taagtgggcc
     1141 attgatacat ctctaaagga gtggtgttgg cgtcgtaata ttcgttcagg aacagaaact
     1201 caacaattat ttgatatgct ttccgcgatt tctcatgttt acttttcttc ttcgtcggat
     1261 tcgtgggttt ctaatctctc ggcagatggc tccttttcgg ttaataaatt tcgtcgtata
     1321 attgatgttg atccttctga atcgtgtctg acagtttggt gcaaaaacat tcctccaaag
     1381 gtgaattttt ttatttggcg agcaggttta aataggctcc cagataaatg taatctttta
     1441 aaaaaagggg tggttttgca aaacgtcttg tgctcctcat gttctcttga tgctgaagat
     1501 cttcaacata tcttctttga atgcgtaatt gcttctcaag tgtggactta cattgctact
     1561 tggatcgaag tctctattcc gaaatggaat gctcttgatg atctttggaa ctggattaga
     1621 accgctcatc agaagcatac ggatcgcatc atcatcgagg ttatttgcta cgccacgctt
     1681 tggaccttat ggcctgatgg tgctgatgct gttgctgata ctgatgcaac tactggtgct
     1741 tataatgttt gctgtgttga tgatgttggc ggtactgttg aggctgttgc tgattctggt
     1801 agggccgtcg gtgctgctga tggtgctgat gctgttgcta atactgatgc aactactagt
     1861 gcttataatg cttgctgtgt tgatgatatt ggcggtactg ttgaggctgt tgctgattct
     1921 ggtagtgccg tcggtgctgg tgatatagta gccgttgatc ttccttctta tgattttgat
     1981 ttccctccac ttttaggact tcttccccta tcccctcccc tacatcacat aaagcgtaac
     2041 atcaaatcca atgtgtcagt cccacatgtt ccctactacc taacctccac gtgtattaca
     2101 ccagagtttt tctttttctt ttctttattc cttggtaaca cacaatga
//
LOCUS       XM_071833029            1059 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides peroxisomal acyl-coenzyme A
            oxidase 1-like (LOC139842930), mRNA.
ACCESSION   XM_071833029
VERSION     XM_071833029.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1059
                     /gene="LOC139842930"
                     /note="peroxisomal acyl-coenzyme A oxidase 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139842930"
     CDS             775..1059
                     /gene="LOC139842930"
                     /codon_start=1
                     /product="peroxisomal acyl-coenzyme A oxidase 1-like"
                     /protein_id="XP_071689130.1"
                     /db_xref="GeneID:139842930"
                     /translation="MLQVARFLVKTVSELGYKKPVGTTAYMGRVADLMEKNCTVQTAA
                     EWLNPSAIIEAFESRAARMAVHCGKQLSKFENPEEGFAELVADLVEAAVV"
     misc_feature    <775..>1053
                     /gene="LOC139842930"
                     /note="acyl-coenzyme A oxidase; Region: PLN02443"
                     /db_xref="CDD:178062"
ORIGIN      
        1 tgatatgatc gagacaagaa acaagagaaa gcagttgact tgttccaatg agttatcctt
       61 tttatcaaag aaggttataa atccaaccac caatttatgt tttacaaacc aattagataa
      121 cactgcttat ctgttttgta tttctgttaa cgatgtaaat caaattttct gttaaccaat
      181 attctgttaa caagaatctc aagtttgttc tacaatataa cttgcaagaa acactacact
      241 agcagtggtt gatgttattt actttgaaaa attacaacta gtgatgataa tcgaacgagt
      301 tctacttttg gtgatgatgt agtgcatgaa aacgttttga cgctggataa gtatggattc
      361 agacattcag tgcaagattg aacagtaaaa caaccactaa aggtttgaat ttctatattg
      421 tttagtgtgt tgaccaatta cacagtaaca acaattatct agatatgttt aaaagagtgt
      481 tcctagcctg aatatatagt tttttagagt gattactaag tgtttgatga aatacctacc
      541 agtttttaat accttaagta gcacatataa taccattcaa atgtcaatgt atatacaaaa
      601 atccgaaggt caattgtgta gtaaagacta ttggtgttat tgacgctatc gacacatttg
      661 tgattctgta gtaaactatg tggtggtcat ggctaccttg aaagtagtgg gcttcctgaa
      721 ttatttgcgg tttatattcc tgcttgtact tatgaagggg acaacgttgt tcttatgcta
      781 caggttgcac ggtttcttgt gaagacagtt tcggaactgg gatacaaaaa gcctgttggg
      841 acaacagctt atatgggtcg agtggcagat ctgatggaga agaattgtac tgttcaaact
      901 gctgcggagt ggctaaaccc tagtgcaata attgaagcat ttgagtcaag ggctgctcga
      961 atggctgtac actgtggtaa acagttatct aagtttgaaa accctgaaga aggttttgca
     1021 gaactagtag ccgatttagt tgaggcagca gttgtgtga
//
LOCUS       XM_071833030             751 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842932), mRNA.
ACCESSION   XM_071833030
VERSION     XM_071833030.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..751
                     /gene="LOC139842932"
                     /note="uncharacterized LOC139842932; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842932"
     CDS             5..751
                     /gene="LOC139842932"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689131.1"
                     /db_xref="GeneID:139842932"
                     /translation="MLRLGKISAHWPWEEVRPAIVGPDGNEMKMKRVLTAEEIAGIAF
                     RKQNVNQPLEQEKTGENAPATSGNKRKAAEASQSQQKKKKLTPKQREDKRNDNFVPIE
                     PRSADLPPPSSGHAEETHHTPPRVNPDLEATAESKDKTIHLDSESTPTPPHGSFRLVM
                     DSGPVTDKFNAYVDAVKDHEVNKTVLEVIQACSLTPPYPDAVQKKLKEGTAAALLEAE
                     NATTTIPIPLIDAFAADPNMPIDGFLKEDF"
ORIGIN      
        1 cgtgatgttg cggctaggga agatatccgc acactggcca tgggaggaag tgcgtccagc
       61 catagtcgga ccggatggaa atgagatgaa gatgaagaga gtactgactg cggaggagat
      121 tgcgggcatc gccttccgca aacagaatgt gaaccagccg ttagagcagg agaagactgg
      181 cgagaatgca cctgccacct ccggcaataa gcgcaaggcc gccgaagcct cccaatccca
      241 acagaagaag aagaaactca ctcccaaaca gagggaggac aagcggaacg ataacttcgt
      301 tcccatcgaa ccccgttctg cggatctacc tcccccatcc tctgggcatg cggaagaaac
      361 tcatcacacc ccaccgcggg tcaatccgga cctcgaagct actgccgagt caaaggataa
      421 gacgatacac ctggactctg agtccacacc aaccccgcca cacggtagct tccgattggt
      481 gatggattct gggccagtta ccgataagtt caatgcctat gttgacgcgg tgaaagacca
      541 cgaagtcaac aagacagtct tagaggtgat tcaagcctgc agcctcacac caccgtaccc
      601 tgacgctgtg cagaagaaat tgaaggaggg tacggctgcg gcattgctgg aagcggagaa
      661 tgctaccacc accattccta tccctctaat cgatgcgttt gcggcggacc caaacatgcc
      721 gattgatggg tttctcaagg aggattttta g
//
LOCUS       XM_071833031             429 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842933), mRNA.
ACCESSION   XM_071833031
VERSION     XM_071833031.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..429
                     /gene="LOC139842933"
                     /note="uncharacterized LOC139842933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842933"
     CDS             1..429
                     /gene="LOC139842933"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689132.1"
                     /db_xref="GeneID:139842933"
                     /translation="MRIARELGIKKLQSYVDSQLVANQINGTFDANDKSMQSFLALVH
                     SLADAFVGFRINQIPRIQNKQADVLSKLASLTFNDLGKKILVEQIFTKSTEPETTIAS
                     VEEEEATWMTYIIEFLRTGSLPEGEKEAMKIRVKAPNYEL"
     misc_feature    <1..222
                     /gene="LOC139842933"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgcgcatag cccgagagct gggaatcaaa aagcttcaat cttacgtgga ttcacagctt
       61 gtcgccaatc agataaacgg tacctttgac gccaacgaca aatccatgca atcattcctg
      121 gctctggttc attctctcgc tgacgcgttt gtcggcttca gaatcaacca aattccaagg
      181 atccagaaca agcaagcaga tgtgctcagc aaattggcat ccctcacctt caatgacctc
      241 ggaaagaaaa tattagtaga gcaaatattc acgaagtcca cagaacccga aacaacaatc
      301 gcatctgttg aagaagaaga agcgacctgg atgacatata tcatagagtt cctgcgaacc
      361 ggatctttac ccgagggaga gaaggaagcg atgaagatca gggtgaaggc accaaactat
      421 gagttgtga
//
LOCUS       XM_071833032             687 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842934), mRNA.
ACCESSION   XM_071833032
VERSION     XM_071833032.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..687
                     /gene="LOC139842934"
                     /note="uncharacterized LOC139842934; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842934"
     CDS             1..687
                     /gene="LOC139842934"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689133.1"
                     /db_xref="GeneID:139842934"
                     /translation="MSGDDSSGSKITRVSGLDFGDPLYLHPSDTSTTALVSLNLKGTE
                     NYSVWSRSMILALQTKNKVGFVDGTCVKNTSDLVLMSQWDRCNSVMLSWILNSISEDL
                     FVGQVFSTSAKFVWDELQETYDKIDGSITYNLHHKLNTITQSGSTVSDYYHKLNSLWK
                     QFDALVKLPTCVCDANKEFKSHNDLIKLMQFLMGLDDSYSTIRSHILTSDPLPSVKSA
                     FATIFKGRIS"
     misc_feature    76..216
                     /gene="LOC139842934"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_3; pfam14244"
                     /db_xref="CDD:464114"
     misc_feature    271..645
                     /gene="LOC139842934"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
ORIGIN      
        1 atgtctgggg atgatagtag tggatctaag atcactcgag tgagtggtct tgattttgga
       61 gatccattat atcttcatcc tagtgatact agtactactg ctttagtttc attaaattta
      121 aaaggtactg agaattatag tgtttggagt agaagtatga ttcttgcttt gcagactaag
      181 aataaagttg gttttgttga tggtacttgt gttaaaaata cttctgatct tgtgcttatg
      241 agtcaatggg ataggtgtaa ttctgttatg ttgtcttgga ttttgaattc tatatctgaa
      301 gatttgtttg ttggtcaagt ttttagtaca tctgctaagt ttgtttggga tgaactacag
      361 gaaacttatg ataaaattga tgggtcaatc acatataatt tacatcacaa acttaatact
      421 ataactcaaa gtggttctac tgtttctgac tattatcaca aactaaattc tttatggaaa
      481 caatttgatg ctttggttaa attacctact tgtgtttgtg atgctaataa ggaatttaaa
      541 tctcataatg acctgataaa acttatgcaa tttttaatgg gtttggatga ctcctattct
      601 actataagaa gtcatatttt aaccagtgat cctctaccta gtgtaaaatc tgcttttgcc
      661 acaattttca agggaagaat ctcatag
//
LOCUS       XM_071833033             568 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides PRA1 family protein F3-like
            (LOC139842935), mRNA.
ACCESSION   XM_071833033
VERSION     XM_071833033.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..568
                     /gene="LOC139842935"
                     /note="PRA1 family protein F3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842935"
     CDS             8..568
                     /gene="LOC139842935"
                     /codon_start=1
                     /product="PRA1 family protein F3-like"
                     /protein_id="XP_071689134.1"
                     /db_xref="GeneID:139842935"
                     /translation="MTTYGTIPTSSGAGGTNLEYLSRAKQRIKSGLGTRRPWKQMFNL
                     TSFNFPHSIFSEAFPRIRTNATYFRMNYAIIMLLILFISLLWQPISLIVFVLLMAAWL
                     FFYFLRDEPLVIVNRVIGDWIVLIVLSVVTIGLLLVCGATVNVLVGVLVGFVVVVVHG
                     VVRNIDDLCLDDEDGDEAGGYLVGDS"
     misc_feature    95..>433
                     /gene="LOC139842935"
                     /note="PRA1 family protein; Region: PRA1; pfam03208"
                     /db_xref="CDD:460846"
ORIGIN      
        1 aaaaacaatg acaacttacg gcaccattcc aacttcctcc ggcgccggtg gtacaaatct
       61 cgaatacctt tcccgcgcaa aacaacgaat caaatcaggt ctcggcacac gtcgtccatg
      121 gaaacaaatg ttcaatctca cctcattcaa cttccctcac tcaattttct cagaagcatt
      181 tccacgtatt agaacaaacg ccacttactt ccgtatgaac tacgcgatca ttatgttact
      241 aattctgttt atcagtttgt tatggcaacc gatttcgttg atcgtgtttg ttttgttgat
      301 ggctgcttgg ttgttttttt actttcttcg tgatgagccg ttagtgattg tgaatcgtgt
      361 gattggtgat tggattgtgt tgattgtgtt aagtgttgtg acgattggtt tgttgttggt
      421 ttgtggtgcg acggttaatg tgttggttgg ggttttggta gggtttgtgg ttgtggttgt
      481 tcatggtgtt gttaggaaca ttgatgattt gtgtttggat gatgaagatg gtgatgaagc
      541 tggcggttat ttggttggtg attcttag
//
LOCUS       XM_071833034             756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842937), mRNA.
ACCESSION   XM_071833034
VERSION     XM_071833034.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..756
                     /gene="LOC139842937"
                     /note="uncharacterized LOC139842937; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842937"
     CDS             1..756
                     /gene="LOC139842937"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689135.1"
                     /db_xref="GeneID:139842937"
                     /translation="MPEGLCAQHSGYRTVVGRIMRQGYYWQSIYKDTAEVIKTCDACQ
                     RHGTVQRLPKYDLISAHFKEVWEMQSSCLLQLISSVSGLKRRYGLPNEIVSDNGKQLA
                     DNPFRIAHPQANVQVEVTNKEIVAGIKARLGLSQIKWVDEVLYVLWAHRTTSKRSTGE
                     TPFSLVYGTEAVIPAEIRVPTQRILAFDIENNSSILRENLNLLEERRIMAAIRQADAK
                     LKMAKYYNKRVRYVQFKEGDLVLRDNEASRQEK"
     misc_feature    <25..138
                     /gene="LOC139842937"
                     /note="Integrase zinc binding domain; Region:
                     Integrase_H2C2; pfam17921"
                     /db_xref="CDD:465569"
ORIGIN      
        1 atgcctgaag gattatgtgc acaacattcc ggttatagaa ctgtggttgg acggattatg
       61 cgacaaggat attattggca gtcaatttac aaagatacag cagaagtaat caagacatgt
      121 gatgcctgcc agcggcatgg aactgtacaa cgtttaccca aatacgattt aatctcagcc
      181 catttcaaag aagtgtggga aatgcaaagt tcttgtttgt tgcaattgat ttcttcagta
      241 agtgggttga agcgaagata tggattacca aatgaaattg tcagtgacaa cggtaaacag
      301 cttgcagata accccttcag aattgctcac ccacaagcca atgtgcaagt tgaagtaaca
      361 aacaaagaaa ttgtagccgg cataaaggct aggttgggtt tgagccagat taagtgggtg
      421 gatgaagtgc tatatgtatt gtgggctcac cgcacaacgt caaaacggag cacgggtgaa
      481 acaccattca gtttggtata tggcacagag gcagtgatac cagctgaaat ccgtgttcca
      541 acacaaagga ttttggcatt tgatattgaa aataattcat ccatcttacg tgaaaacttg
      601 aatttattgg aagaaaggcg aatcatggct gccatccgtc aagcggatgc aaaactgaaa
      661 atggcaaaat attataataa gcgagtcaga tatgtgcaat tcaaggaggg ggatttagtg
      721 ttaagagata atgaggcaag taggcaggaa aaataa
//
LOCUS       XM_071833036            2643 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842938), mRNA.
ACCESSION   XM_071833036
VERSION     XM_071833036.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2643
                     /gene="LOC139842938"
                     /note="uncharacterized LOC139842938; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842938"
     CDS             1..2643
                     /gene="LOC139842938"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689137.1"
                     /db_xref="GeneID:139842938"
                     /translation="MWDFLHNLVLSNNNQAWLMGGDFNEVRNVNKRFNCNFIEARAKK
                     FNDFIENTKLVDIPLGGRIFTLVSDDGLKFIKLDRFHVNDLFHHMWSCLSVVALERGK
                     SDHCPIILKNDVRNFGPKPIKVFDDWLDIEGVEDCIKEVWDEVVGGGSHLDCRLRNKL
                     KKAKATLKSKSSQKFGNLEGEIELFRAMANAFELRAETGQLNDDERVEWLKVRKEWFQ
                     KEKIKGNMLKQKARVRWVLEGDENTRYFHSIIKRGYNKCNIRGLNINGVWCEDPLDIK
                     EAAYNHFKNIFSERSGPRYSLNELNYLTLSSEEAYGLEVAIEEAEIVEAINDCGSGKA
                     PGPDGFNLRFFKKFWGVIKGDVINAISWFWKKGLIFKVDFEKAFDSLNWDFLLEVMRC
                     MGFGEKWSSGLKVNFNKSCLYGVGANAGEIESLARRMGCQAGKFPFIYLGLPIGAKMR
                     KVKDWDPVILKIKKRLSEWKMRTMSFGGRLVLLKSVLNSLPLYYFALFRAPPCVLKIL
                     ESVRRSLIEDLNIPFVSSFKRSIGDGSSTKFWNEAWCGSESLKNVFSRLYRLETNKNI
                     VISGRIKQCHQHALGSGQTGCNSGTAGLHQSRDQVTNLGAYSEAEGKGESPGQYTNNH
                     HNRVDQSVGGANNSGSNHIRFNWEWIREPTGRTAGELEELINLLRSISFEFNHQMSWK
                     WTLASNGLFTVKTLSKLIDSEVLDSGALSTQERLRNNLVPKKIEVFIWRVLKKRLPVR
                     IELDKKGIDLHSIRCPVCDDGLESVDHALVDCKFSSDVWSRVLKWWNSNSNINSTDLL
                     RGKSSHTMSLLGSKIWQAVEWICAYSIWRNRNSLVFQGKSSISPVILNEIQVKSFEWI
                     SERIKGVSIDWHSWLVTPYLYVNV"
     misc_feature    <52..333
                     /gene="LOC139842938"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    <1066..1335
                     /gene="LOC139842938"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    <2152..2334
                     /gene="LOC139842938"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgtgggact ttctccataa tttggtgttg agcaacaata atcaggcttg gttaatgggt
       61 ggagacttta atgaggttcg aaatgttaac aaaaggttca attgtaattt tattgaagcc
      121 agggcgaaaa agttcaatga ttttatcgaa aacaccaagt tagttgatat tccgttgggg
      181 ggacgtattt tcactcttgt cagcgatgat ggtctcaaat tcattaagct agatcgtttt
      241 catgtaaacg atttgtttca tcatatgtgg tcttgtttat cggtagttgc attggaacga
      301 gggaagtcag accattgtcc gatcattcta aagaatgatg tcagaaactt tgggccgaaa
      361 ccaattaaag tgtttgatga ttggctagat atcgaaggag tcgaggactg tataaaagaa
      421 gtgtgggatg aagtagttgg tggtggctcg catttagact gtcggttaag aaataagctt
      481 aaaaaagcga aagctactct aaagtcaaag agttcacaaa aatttggcaa tctagagggt
      541 gagattgagc tttttagagc gatggctaat gcgtttgaac ttcgggctga aacggggcaa
      601 ttaaatgatg atgaaagagt cgagtggctg aaggttagga aggaatggtt tcaaaaggag
      661 aaaatcaaag gcaacatgtt gaaacaaaag gcgagagttc gttgggtgct tgaaggtgat
      721 gagaatacta ggtactttca ctcgataata aaaaggggtt acaacaaatg caatattagg
      781 ggtttaaata ttaatggcgt ttggtgtgag gatccccttg acataaagga ggcggcctac
      841 aatcacttta aaaacatctt tagtgaacgc tcgggaccca gatatagtct taatgagcta
      901 aactacctga ctttatccag tgaagaggcg tacgggctag aggtagctat tgaggaggca
      961 gagattgtag aggcaattaa cgattgtggt agcggtaaag ccccgggtcc ggatgggttc
     1021 aacttaagat tttttaagaa gttttggggg gtgattaaag gcgatgtgat aaatgctatc
     1081 tcgtggtttt ggaagaaagg gcttatattt aaggttgatt tcgaaaaggc ttttgatagt
     1141 ttgaattggg atttcctcct tgaagtcatg agatgtatgg gatttggtga gaaatggtct
     1201 tcgggattga aagttaattt caacaagagt tgtctttatg gtgtgggtgc caatgcgggt
     1261 gaaattgaaa gtctagcaag acgaatggga tgccaagccg gaaaattccc atttatttat
     1321 ttaggattgc ctatcggtgc caaaatgagg aaagtaaaag attgggatcc ggtaatcctt
     1381 aagattaaga agaggctttc ggaatggaaa atgcgtacga tgtcctttgg tggacggttg
     1441 gttctcctaa aatcggtgct taatagtctt ccattgtatt atttcgcgct cttccgtgct
     1501 ccaccttgtg tgcttaaaat tcttgagagt gtgagacgtt cgctaattga agacctaaat
     1561 attcctttcg taagttcgtt caagagatcg ataggagatg gtagctctac gaaattttgg
     1621 aacgaagcgt ggtgcggttc ggagagtctc aaaaatgtgt tttccagatt gtacaggctt
     1681 gaaacaaaca agaatattgt gatttctggg cggataaaac agtgtcatca acatgctttg
     1741 ggttcggggc agacgggttg caattcgggt acagcaggcc tacatcagtc tcgtgatcag
     1801 gttactaatc taggtgcgta ttcggaggca gaaggcaaag gcgagtcacc tggtcagtat
     1861 actaataatc atcacaaccg agtagatcag tcagttggcg gggcaaataa ttcgggttca
     1921 aatcatattc gtttcaattg ggaatggata agggaaccca cagggcgtac agcgggtgaa
     1981 ctcgaggaat tgatcaactt gctaagatca atctccttcg agtttaacca tcaaatgtct
     2041 tggaaatgga cacttgcaag taacggtttg ttcacagtta aaaccctatc gaaattaatt
     2101 gattcggagg ttctagacag cggtgctctt tcgacacaag agagattaag aaacaatctt
     2161 gtcccaaaga aaattgaggt ctttatatgg agggttttga agaaaagatt gccggttcgg
     2221 atcgaacttg acaaaaaggg cattgactta catagtattc gatgtcccgt ttgcgatgac
     2281 ggtcttgaat cggttgatca cgccttagtc gattgcaaat tttcatcgga tgtgtggtct
     2341 cgtgttctta aatggtggaa ctccaatagc aacataaact ctaccgattt acttcgtgga
     2401 aaatcttctc acactatgtc cttactcggc tccaagattt ggcaagccgt ggagtggata
     2461 tgcgcttatt cgatatggag gaatcgtaac tcgttagtgt ttcaaggcaa aagtagtatc
     2521 tcaccggtga ttcttaatga gatccaagta aaatctttcg aatggatctc ggaaagaatc
     2581 aaaggcgttt ccatcgattg gcatagttgg ctagttactc catatttgta tgtaaacgtt
     2641 taa
//
LOCUS       XM_071833037            1853 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein HOTHEAD-like
            (LOC139842939), mRNA.
ACCESSION   XM_071833037
VERSION     XM_071833037.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1853
                     /gene="LOC139842939"
                     /note="protein HOTHEAD-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139842939"
     CDS             1..1827
                     /gene="LOC139842939"
                     /codon_start=1
                     /product="protein HOTHEAD-like"
                     /protein_id="XP_071689138.1"
                     /db_xref="GeneID:139842939"
                     /translation="MALKKFNNIYLNLFLLSCCFATLITFTQGNNKFWKDQYPFIRKA
                     SSFSSSSSSASSSSSASSSSSKSTGSNGGKKEYDYIVVGGGTAGCPLATTLSQNYSVL
                     LLERGGVPFANINVSFLSNFHLTLADTSPTSASQVFISTDGVFNARARVLGGGTSINA
                     GFYTRASTRYVKSSGWDAKLVNESYPWVEKQIVHEPVFEPWQRAVRDGLVEIGISPNN
                     GFTYDHLYGTKVGGTIFDKYGRRHTSAELLASGNVQNLDVLIHATVQKIIFDTTGKKP
                     RAYGVIFKDENGVQHEAYISRRRRSEIIVTCGAIGSPQLLLLSGIGPKADLEKLNISV
                     VHDNKYVGKHMSDNPLNTIFVPFNRSVKQSLIETVGITKRGVYIEASSGFSQSPDSIQ
                     CHHGVASAEIGQLSTVPPKRRTREHIEEFKRNKRDLPREAFHGGFILEKLAYPKSKGH
                     LILNNTNVDDNPIVTFNYFSHPTDLRKCVKGIRIVEKLVRSKPFINFTQSTKETFDKL
                     LNLSVTANINMIPRHTNDTKSLKQFCKDTVISIWHYHGGCHVGQVVNKDYAVIGVHRL
                     RVIDGSTFHESPGTNPQATVMMLGRYMGVKILRDRLGKSAGV"
     misc_feature    31..1824
                     /gene="LOC139842939"
                     /note="Protein HOTHEAD; Region: PLN02785"
                     /db_xref="CDD:215420"
ORIGIN      
        1 atggcactaa aaaaatttaa caatatttat ctcaatcttt ttcttctttc ttgttgtttt
       61 gctaccctca tcacctttac tcaaggtaat aataagtttt ggaaagatca gtacccattt
      121 atcagaaaag caagttcatt ttcatcatca tcatcatcag cttcatcatc atcatcagca
      181 tcaagttcat catcaaagtc aactggatcc aacggtggaa aaaaagagta tgattatata
      241 gtagtaggag gtggaacagc agggtgtcca ttggcaacaa cactgtcaca aaattacagc
      301 gtgttattac tagaaagagg tggtgtccct tttgcaaaca taaatgtttc tttcttgtca
      361 aatttccatc ttacacttgc agacacttct ccaacttctg cttcacaagt ttttatatcc
      421 accgatggtg tttttaatgc tagagctaga gtcttgggtg gtggtacttc tattaatgct
      481 ggcttttaca ctcgagcaag cacaagatat gttaaaagtt caggatggga tgcaaaacta
      541 gtgaatgaat cgtacccatg ggtcgaaaaa caaattgttc acgaaccagt ttttgaaccc
      601 tggcaaagag cagttagaga tggtcttgtg gaaattggaa tttctccgaa caatgggttc
      661 acttatgacc acttgtacgg tacgaaggtt ggtgggacta ttttcgacaa gtatggtcga
      721 cgacacacat ctgcagagtt actagcttct ggaaacgttc aaaaccttga tgttttgatt
      781 catgccacag ttcaaaaaat tatttttgac acaactggga aaaaaccgag ggcgtatggt
      841 gtgatcttca aagatgaaaa cggggtacaa cacgaggctt atatctcgag gaggcgtagg
      901 agtgagatta ttgtaacgtg tggagcgata ggcagcccgc aactgctatt acttagtgga
      961 ataggaccaa aggctgatct agagaagtta aacatatcag tggtgcatga taacaaatat
     1021 gttgggaaac acatgtctga taatccgttg aacacaattt ttgttccttt caataggtct
     1081 gtcaaacagt cgttgattga aactgttgga atcacgaaaa ggggagttta tattgaagca
     1141 agtagcgggt ttagtcagtc tcctgatagc attcaatgcc accatggtgt cgcttcggct
     1201 gagattggtc aactgtcaac cgttcccccg aaaagaagaa caagagaaca cattgaagag
     1261 ttcaaacgaa acaaaagaga tctcccacgc gaagcatttc atggaggttt catcttagaa
     1321 aaactcgcat acccaaagtc aaaaggacat ttgatcttaa acaacacaaa tgttgatgac
     1381 aacccaatcg tcacatttaa ctattttagc cacccaacag accttcgaaa atgtgtaaaa
     1441 ggaatccgaa tagtggaaaa actggtgagg tccaaacctt tcattaactt cacccaatcc
     1501 accaaagaaa ctttcgataa actgcttaac ttgagtgtta ctgcaaacat taatatgata
     1561 ccgcgccata caaatgacac aaagtccctc aagcagtttt gtaaggacac tgtgatatct
     1621 atttggcact atcacggcgg gtgccatgtg ggccaggtgg tgaacaagga ttacgcggtc
     1681 attggggtcc acagacttcg agtcatcgat gggtccactt ttcatgaatc tccaggaacc
     1741 aatccacaag caactgttat gatgttgggc aggtatatgg gagtgaagat tttaagagac
     1801 agattaggaa aatcagccgg tgtatgaagt gattgtagaa gactttattc tcc
//
LOCUS       XM_071833038            2133 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative pentatricopeptide
            repeat-containing protein At1g17630 (LOC139842940), mRNA.
ACCESSION   XM_071833038
VERSION     XM_071833038.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2133
                     /gene="LOC139842940"
                     /note="putative pentatricopeptide repeat-containing
                     protein At1g17630; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139842940"
     CDS             58..2133
                     /gene="LOC139842940"
                     /codon_start=1
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g17630"
                     /protein_id="XP_071689139.1"
                     /db_xref="GeneID:139842940"
                     /translation="MLHISHSKSKHLLHIPNALLSRHTVSYSQIKSNDIFDQFDHLLR
                     NCSKAKQSKQIHAQIIHFGGLSTVFLPSRLISTYSNFNLLTDAKNVFNTLPNERIYDT
                     IIWNSMLRANVTNNECKETVNLYTRMQKVGVFVDEFSFPLVIKACAMMGNVKLCALVH
                     CHSILSGFKDNMYVANELLVAYGKVGRMGVARQVFDEMLVRNLVSWNTMVSGFSSNCD
                     CEGAFEMFRRMERDGWEPNIVTWTSLLSSYSRCGRRWETLRLYNVMRNKFVSVTAESI
                     SVVVSVCKDSDVLNKGREIHGYVVTAGFEDYSFTKNALLCMYGKCAEFQSVEKLFAEI
                     KIKNVVSWNALISLYVQVGLCDEAFTTFLKLEKSEKHLAPNVISWSAIINGFAANGRS
                     AESLDLFRKMQRAKVRPNVVTVTSLLLACADLSTVVIGKETHGYIVRNAMDDYLLVGN
                     RLIDMYAKCGSLKDAHIVFKNIKNKDVCSWNTIIGGYGMLGNVDIALNIFKQMIDNGC
                     NPDGVTFVSLLSACSHTGLVDEGRKLFNEMKRKFGIEPEIEHYACMVDLFGRAGLFQE
                     ASEVAKNMPGEPNVCVWGALLNSSRMHRNVDWDQELVSKILDASPATGNYMLMSNIYA
                     ESGQWEDSAKVRVSARARGLTKTPGQSWIEVNKKVHMFTAGEFVEGEMKEVHKLLKIL
                     SFELKPAIT"
     misc_feature    259..2094
                     /gene="LOC139842940"
                     /note="Protein ECB2; Provisional; Region: PLN03077"
                     /db_xref="CDD:215561"
     misc_feature    277..348
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    361..450
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    472..555
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    583..651
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    664..753
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    769..858
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    991..1068
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1078..1167
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1183..1272
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1405..1482
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1492..1575
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1591..1680
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1699..1779
                     /gene="LOC139842940"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      
        1 gaatttacca aatgttcgtt tttatcgtgt ttctatcgct caaaattaac aagcttcatg
       61 cttcatattt ctcattcaaa atcaaagcac cttcttcaca tccccaatgc attactttcc
      121 cgccacaccg tttcttactc ccaaattaaa tccaacgaca tttttgatca attcgatcac
      181 cttctacgaa actgttcaaa agccaaacaa tcaaaacaaa ttcacgccca aattattcat
      241 tttggtggtt tatcaactgt ctttttacct tctagactta tatctacata cagtaatttt
      301 aatctcctta ctgatgccaa aaatgttttc aacacccttc caaatgaacg tatttacgat
      361 acgattatat ggaactcgat gttacgtgcc aatgttacta ataatgagtg taaagaaact
      421 gttaaccttt atactcgaat gcaaaaagtt ggtgtttttg ttgatgaatt tagtttccct
      481 ttagtaatta aggcttgtgc tatgatgggt aatgtaaagt tatgcgcttt agtacattgt
      541 cattctatat tatcaggatt taaagataac atgtatgttg caaacgaatt gttagtagct
      601 tatgggaagg ttgggcgtat gggtgttgct cgccaagtgt ttgatgaaat gcttgtgaga
      661 aatctcgttt cttggaatac tatggtttct ggtttctctt caaattgtga ttgtgagggt
      721 gcttttgaga tgtttcggcg gatggaacgt gatgggtggg agccgaatat tgtgacgtgg
      781 acgtctttgt tgtccagtta ttctaggtgt ggtcggcgtt gggagacgtt gcgattgtat
      841 aacgtgatga gaaataaatt tgttagtgtt acagctgaat caatttctgt ggttgtatct
      901 gtttgtaaag attcggatgt gttaaacaaa ggtagggaga tccatggata tgttgtaacg
      961 gctggttttg aggactattc gtttaccaaa aatgctcttt tatgcatgta tggaaagtgt
     1021 gcagaatttc aaagtgtgga gaaattgttt gcagagatta agattaagaa tgtagtcagc
     1081 tggaatgctt tgatatcatt atatgttcaa gtggggctat gtgatgaggc ttttacaaca
     1141 ttcttgaagt tggagaaatc ggaaaaacat cttgcgccta atgtgattag ctggagcgcg
     1201 attataaacg gatttgcagc aaatggacga tcagcagaat ctttggatct tttcaggaaa
     1261 atgcagcggg cgaaagtgag accgaatgtt gtaactgtaa ctagtctttt attagcttgt
     1321 gcagatttat caacagtcgt tattggtaag gaaacacatg gttatattgt tagaaatgca
     1381 atggatgatt atttattggt tggcaatagg ttgatagata tgtatgctaa atgtggtagc
     1441 cttaaggacg cgcatatagt gttcaagaac ataaaaaaca aagatgtatg ttcatggaat
     1501 acgataattg gaggatacgg aatgctcgga aatgttgata ttgcgttaaa tattttcaaa
     1561 caaatgattg ataatgggtg taaccctgat ggggttacat ttgtttcgtt actttctgct
     1621 tgtagtcata cgggccttgt tgatgaggga cgtaagttgt ttaatgagat gaaaagaaag
     1681 tttgggatcg aaccagaaat tgagcattac gcttgtatgg tggacctgtt tggacgggcc
     1741 gggctttttc aagaagcaag tgaagttgct aaaaatatgc ctggagaacc aaatgtgtgc
     1801 gtttggggcg ctcttttgaa ctcgagtaga atgcatagga atgtcgattg ggatcaggag
     1861 ttggtttcga agatacttga tgctagtcct gcaactggta attatatgct gatgtcaaat
     1921 atatatgcag aaagtggtca atgggaggac tctgcgaagg tgagggtgtc ggctagggct
     1981 cgaggtttga ctaaaactcc aggtcaaagc tggattgaag tgaataaaaa ggtccatatg
     2041 ttcacagcag gtgagtttgt ggaaggtgag atgaaggaag ttcataaact gctcaaaatt
     2101 ttgagttttg aattgaaacc tgccatcact taa
//
LOCUS       XM_071833039            2093 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842942), mRNA.
ACCESSION   XM_071833039
VERSION     XM_071833039.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2093
                     /gene="LOC139842942"
                     /note="uncharacterized LOC139842942; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842942"
     CDS             270..1937
                     /gene="LOC139842942"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689140.1"
                     /db_xref="GeneID:139842942"
                     /translation="MSQEQGYVEGKLTMKNMLTVIPQVKKMLTERQEKLFRSTCFGPW
                     LDLSYTGNDPGLVHAMLQRKCERSEKLDASKYPEEQQDIWFHFSPNFMIRFGRREFCL
                     VTGFMFGSQTDMAHYIPRNYESKTAPIRRRCFPERPDASNILVSDIQNILIKKQGDVK
                     VPKVSDDDIVRLAIILIVERAFMGKQGQHVVSKQFLWLVEDFNKVNVYPWGSRIWDAT
                     YSAVSEGFEVRESQLESGGGKAYTLAGFMWAFKIWILEAYRRTIKSFATKTDKDGVPR
                     ALFWKRSSAETFTVSDYLKLLHIMDDCPKRKRPFRSLHPSETERGCQWWIQSSSYFQG
                     DVVEDEKNTQDDNQVEEDLGGSLKELLQEESEQTSDPHPTQKGNKLQELLRMVNMLTN
                     RVDDQEKELADCKKKLDDHEKRLKEQEHQEHQYADNEDAYVDPRSFSDNDTSPRVVRR
                     GKRERRPTHFLNSPFTTPGYRKPLEKLSDEVASRVKRLKVSHQGTKEAENVLPMETEK
                     PTEKGAEKAVDKQDENVALVSEEIEQGVDLPLVNEAEKQADQHDVSE"
     misc_feature    516..923
                     /gene="LOC139842942"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 gtgtagctgt aaaagaacta gttaaatgat cagtttgcgt tcactgttcc cacacacata
       61 cgcaaactcc tctctggtgc cctttcgctc gtcattcgca agatccaaac actcgcaaat
      121 cactcgcaaa atcttcatca tcatcctcac gtcatcctcc tcacatcttc atcgttacta
      181 gatcttcttc atccttccat cttcgatctt cccgagtaca agcgagcttc tacgccacca
      241 acatcatcga atcaccatca tcgttcacta tgtctcaaga acagggctat gtggaaggta
      301 aattgaccat gaagaatatg ttgaccgtga ttcctcaggt caagaaaatg ttgactgaga
      361 gacaagaaaa attatttaga agtacatgct ttggtccctg gttagatctt tcatacacgg
      421 gtaatgatcc tggcctagta catgccatgc tccaacggaa atgtgagcgt tcagaaaaat
      481 tagatgctag taagtaccct gaagagcaac aagatatatg gtttcatttt tctcctaatt
      541 ttatgattag atttggtcgg cgtgaatttt gtttagtcac cggctttatg tttggtagcc
      601 agacggacat ggcacattac atccctcgaa attatgaatc taagaccgca cccattagac
      661 gacgttgttt tccagaacgt cccgatgcca gcaacatttt ggttagtgat atacaaaaca
      721 tccttatcaa aaaacaaggt gatgtaaagg ttcccaaggt tagtgacgat gatattgttc
      781 gactagctat aattttgatc gtagagagag cgtttatggg gaagcagggg caacatgtgg
      841 ttagtaaaca gtttctatgg ttggttgaag atttcaataa ggtgaacgtg tacccatggg
      901 ggtctcgtat ttgggatgct acttactcag cggtgagcga aggttttgag gttcgagaaa
      961 gccaattaga gagtgggggt ggaaaggctt acacattggc tggttttatg tgggcattta
     1021 agatttggat cctcgaggca taccgtcgta ccattaagag ttttgcaacc aaaactgata
     1081 aggatggagt accaagagca ttattttgga agcgttcatc tgctgaaacc tttacagtgt
     1141 ctgactacct aaaacttcta catataatgg atgattgtcc gaagagaaaa agaccttttc
     1201 gttccctgca cccatctgag acagagagag gttgtcaatg gtggatccag agttcctctt
     1261 actttcaagg agatgttgtt gaagacgaga aaaatacaca agatgataat caagttgaag
     1321 aggatttggg tggtagtttg aaggaattat tgcaggagga gtcagagcag acctcggacc
     1381 ctcatccaac acaaaaaggc aacaaattgc aggaattgtt gcgtatggtt aatatgttga
     1441 ctaacagggt ggatgatcaa gaaaaggagt tggctgattg taaaaagaag cttgatgatc
     1501 atgaaaaacg tttgaaagaa caggaacacc aggaacatca gtatgctgat aacgaggatg
     1561 catatgtgga tcctcgatct ttctctgaca atgatacatc tccgagggtt gttagacgtg
     1621 ggaaaagaga aagaaggccc actcattttt taaattcccc tttcacaaca ccgggctaca
     1681 gaaaaccatt ggagaagttg tctgacgaag tagcttctag agtaaaaagg ctgaaagttt
     1741 ctcatcaagg gactaaagaa gctgagaatg tgttgccaat ggaaactgaa aagcctactg
     1801 aaaaaggggc tgaaaaagct gttgataaac aagatgagaa cgtggctctg gtgtctgagg
     1861 agattgagca aggagttgat ttgccattgg ttaatgaagc agaaaaacaa gcagaccagc
     1921 atgatgttag tgaatgacgc aaggatcacc ttgcgtcttt gcgtcttctt cattgttgga
     1981 cgcaaggatt accttgcgtc tttgcgtata cttcactgat ggacgcaaga actgtattgc
     2041 gtatttgcgt ttgcattaca ccgacgcaag acaattcttg cgtctttgcg tct
//
LOCUS       XM_071833040             812 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides ubiquitin-ribosomal protein
            eL40 fusion protein-like (LOC139842943), mRNA.
ACCESSION   XM_071833040
VERSION     XM_071833040.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..812
                     /gene="LOC139842943"
                     /note="ubiquitin-ribosomal protein eL40 fusion
                     protein-like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 14 Proteins"
                     /db_xref="GeneID:139842943"
     CDS             348..812
                     /gene="LOC139842943"
                     /codon_start=1
                     /product="ubiquitin-ribosomal protein eL40 fusion
                     protein-like"
                     /protein_id="XP_071689141.1"
                     /db_xref="GeneID:139842943"
                     /translation="MMMTLKMRRRRGIHLILKQRGNMQIFVKTLTGKTITLEVESSDT
                     IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGHCNT
                     VTPYLGNLARKYVQDKLICRKCYARLHPRAVNCRKCHSTQLRPKKKLRWHEP"
     misc_feature    414..641
                     /gene="LOC139842943"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     Region: Ubl_ubiquitin; cd01803"
                     /db_xref="CDD:340501"
     misc_feature    order(429..440,444..446,513..524,531..533,537..539,
                     543..545,549..560,615..641)
                     /gene="LOC139842943"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    order(435..449,504..518,531..533,537..539,543..545,
                     549..560,615..617,621..641)
                     /gene="LOC139842943"
                     /note="E1 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:340501"
     misc_feature    660..791
                     /gene="LOC139842943"
                     /note="Ribosomal L40e family; Region: Ribosomal_L40e;
                     pfam01020"
                     /db_xref="CDD:395807"
ORIGIN      
        1 atggagagat caaaggaagc atgtggggcc agcaaaagat ttgaaatcac taatcctcaa
       61 taagcaagat acgcgttgca tgttcatttt ccaaaatgaa accttcctct tccttgatac
      121 tgagttttgg aaacgtttat tgggaattgc attttctggt tatttggaaa acatacatat
      181 tgatggatgg gctaccttcc tgttgagatt tcggcagagg tttctgcccc gagctagcca
      241 gatgtcctcg agtcctcagt ttccgattgc agattataca tgtagttctc gatggacgat
      301 tatgccattg ggtttcctca atcaactgga gaaattcaag tccttttatg atgatgacac
      361 tcaaaatgag gaggagaagg gggatacatc taatcctgaa gcagagggga aacatgcaga
      421 tattcgtgaa aactttaaca ggtaaaacca taaccctaga ggttgaaagc agcgacacta
      481 ttgataatgt caagtccaaa attcaggaca aggaaggtat tcctccggac cagcagcgtt
      541 tgatctttgc cggaaagcag cttgaagatg gccgaactct tgctgattac aacatccaga
      601 aagaatcaac tcttcatttg gttttgaggc tgaggggagg acattgtaat actgttacac
      661 cttatttggg gaatttggcc agaaagtacg tacaggacaa gttaatttgc cgcaagtgtt
      721 atgcgcgcct acacccaagg gctgtaaact gcaggaagtg tcacagcacc caactaaggc
      781 caaagaagaa gctccggtgg cacgagccat ga
//
LOCUS       XM_071833041            1263 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842944), mRNA.
ACCESSION   XM_071833041
VERSION     XM_071833041.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1263
                     /gene="LOC139842944"
                     /note="uncharacterized LOC139842944; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139842944"
     CDS             1..1263
                     /gene="LOC139842944"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689142.1"
                     /db_xref="GeneID:139842944"
                     /translation="MLTLLMNTHLLNFEAKREAKKAVARAKEKAYKDLYRKLDSKEGA
                     NDIFRIAKARERRRGDIDNIEFIKNEAGQTLVKEDNIRKRWEGYFSSLFDGGRTERHE
                     DRQDSNIEQSQNNRHYESIHQEEVRSALRKMGRNKVVGPYRIPIEAWRCLDDDGVRWL
                     TCLFNKTFRSSKMPMEWILSETIPIYKNKGDAQICDLEKAYDCVPQNLIRKTLNSRSI
                     PNRYISVIRDMYEGAKSCVRTPVGNIEVFPIEVGLHQGSALSPFLFALILDELSRGIQ
                     VCIPWCLILADDIVLVSESKEELNRRLEQWRVALESNGLQISRQKTEYLRCDFSTDDD
                     EQDDGVNICIRDQILHPQISFRYLGSVLHKSGKVDEDVSHRIKVGWVKWRAATGVLCD
                     KNIPLKLKENSLRWQLDMPCYTDQSVGQ"
     misc_feature    <586..1077
                     /gene="LOC139842944"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
     misc_feature    order(586..603,763..768,859..864,1072..1077)
                     /gene="LOC139842944"
                     /note="active site"
                     /db_xref="CDD:238286"
     misc_feature    order(586..603,763..765,859..861)
                     /gene="LOC139842944"
                     /note="NTP binding site [chemical binding]; other site"
                     /db_xref="CDD:238286"
     misc_feature    766..768
                     /gene="LOC139842944"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:238286"
ORIGIN      
        1 atgttaactt tacttatgaa tacccatcta cttaattttg aagccaaaag agaagctaag
       61 aaggctgtag cccgtgctaa agaaaaggca tataaagatt tgtataggaa actagactcc
      121 aaagaaggag caaatgatat cttcaggata gccaaagcca gggagcgaag gcgcggggat
      181 atagataaca tcgagtttat caaaaatgaa gccggtcaaa cgttagtaaa ggaagacaat
      241 attaggaaaa gatgggaagg gtatttctca tctcttttcg atgggggaag aaccgagcgc
      301 cacgaagatc ggcaagactc taatattgaa caatcccaga acaacaggca ttatgagagt
      361 atccaccaag aggaagtaag atcggcatta cgaaagatgg ggagaaataa agttgtggga
      421 ccgtaccgga ttcccatcga ggcgtggcgg tgccttgacg acgatggtgt taggtggctg
      481 acttgccttt tcaacaagac gtttcgaagc tctaaaatgc ctatggaatg gatactgagc
      541 gagactattc ccatctacaa gaacaagggg gatgctcaaa tttgcgactt ggaaaaggcc
      601 tacgattgcg tcccacaaaa cttgattcgg aagaccctga acagtagaag tatcccgaat
      661 agatacatta gtgttatcag ggatatgtac gaaggggcga agtcttgcgt tcgaacgccg
      721 gtgggaaata ttgaagtttt cccaatagaa gtaggcctac atcagggatc ggcccttagc
      781 ccttttcttt tcgctttgat cctggacgag ctttctcgag ggatacaagt gtgcattcca
      841 tggtgcttga ttttggccga tgatattgtg cttgtttcag aatctaagga ggagctcaat
      901 agaagacttg agcaatggag ggtggcctta gaaagtaatg gtctacaaat tagtagacaa
      961 aagactgaat accttagatg tgatttctct acggacgatg acgaacaaga tgatggagtg
     1021 aacatatgca ttagagacca gatcttgcat ccacaaattt cgtttagata cctaggttcg
     1081 gtgctccaca aatcggggaa ggtagatgag gacgtgtcgc accgtattaa ggtagggtgg
     1141 gtgaagtgga gagcagctac cggagtctta tgtgacaaga atatccccct taagttgaaa
     1201 gaaaattctt taaggtggca attagacatg ccatgttata cagatcagag tgttggccaa
     1261 tga
//
LOCUS       XM_071833042            1968 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842945), mRNA.
ACCESSION   XM_071833042
VERSION     XM_071833042.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1968
                     /gene="LOC139842945"
                     /note="uncharacterized LOC139842945; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842945"
     CDS             1..1803
                     /gene="LOC139842945"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689143.1"
                     /db_xref="GeneID:139842945"
                     /translation="MEEDGEETPRTPFWIQSTTNVRRVDLYRRRASSLFFNSGVLIIF
                     LLSLAILCMVFIIPSLISFTSHIFKPNLVKKSWDSINLVLVLFALAFGFLSRNINKDN
                     DLNTNTPRFENGFERTRSDLSTGPPVSSPVISTPHQWYDFPDQPIVGLRRHRSTSSYP
                     DLRELSPPWNHRRFSDDTHLKYDRYYFRQDQDHIDTTMDLPKEESHAPPPQPPSPPHI
                     PPEPPATGKKEKPIQTYHSVAADPEEKVSSLEVEEVSSFKVNNVILPEKETELPVKET
                     ELPEKETELPEKETEQPDTQNSGKMEETLARKRGKGARRRARSSEPRKMVSPENEPAP
                     ELSSYSPPLILPEIQEFEMKHQKLERKKSGNATKEFFTSFYNKKKKKRQRQRSVDNLD
                     NLLHHSQSPERLHHPPPPPPPPPPPSLLNNLFSSKKERRKKTSSTPPLPPPLPPPYTA
                     TRAPRPTTTRVSPFVTEKPRVPIKMNFFNSIDDSSSGGESPMNRIPPPPPMPPFKMPD
                     WKFPVEGDYVRVQSTLNSDSGSPEGDESQSPSSAVASPLFCPSPDVDTKADTFIARFR
                     AGLKLEKMHSFNANQSKRMSNLGPGPGPSQSNRF"
     misc_feature    1654..1755
                     /gene="LOC139842945"
                     /note="Cotton fibre expressed protein; Region: DUF761;
                     pfam05553"
                     /db_xref="CDD:461675"
ORIGIN      
        1 atggaagaag atggtgaaga gacaccaaga actccatttt ggatacaaag caccaccaat
       61 gtccgccgtg ttgacctcta ccgccgccgt gcatcctccc tattttttaa ctccggtgtc
      121 ctcatcattt tcttactctc tcttgctatt ctttgcatgg tttttataat cccatcactt
      181 atttcattca catctcacat ttttaaacca aacttagtga aaaagagttg ggattcaatt
      241 aatttagtct tggttttatt tgctttagca tttggttttc ttagtagaaa cattaataaa
      301 gataacgatc ttaatactaa tacaccaaga tttgaaaatg ggtttgaacg gaccagatcc
      361 gatttatcaa ccggacctcc ggtttcaagt ccggttatat caaccccaca tcaatggtat
      421 gatttccctg atcaacctat tgttgggtta agaaggcata gaagcacgag ctcttaccct
      481 gatctccggg aattatcgcc gccgtggaac caccggagat tctctgatga tacccatcta
      541 aaatatgatc gatactattt ccggcaagac caagatcata ttgatactac aatggatctt
      601 cctaaagaag aatcacatgc tccgccgcca cagccaccgt ctccgccgca tattccgccg
      661 gaacctccgg cgactggtaa aaaagagaag ccaatccaaa catatcatag tgttgctgca
      721 gacccagaag aaaaagtcag cagcttggag gtcgaagaag tcagcagctt taaggtcaat
      781 aatgtaatac tgccggaaaa agaaacagag cttccggtaa aagaaacgga gctgccggaa
      841 aaagaaacgg agctgccgga aaaagaaaca gagcagcctg acactcaaaa ttccggtaaa
      901 atggaagaaa ccttggctag aaaaagagga aaaggagcga gaagaagggc aagaagctca
      961 gagcccagaa aaatggtgtc accggagaat gaaccggcgc ctgagctgtc gtcatattcg
     1021 ccgcctctaa tattgcctga aattcaagag tttgagatga aacaccaaaa acttgaacgg
     1081 aaaaaatcag gcaatgcaac taaagaattc tttacatctt tttataacaa aaagaagaag
     1141 aaaagacaaa gacaaagaag tgttgataat ttagataatt tattacacca ttctcagtcg
     1201 ccggaaagac tccaccatcc accgccgccg ccgccgccac caccaccgcc gtcgcttctc
     1261 aacaacttat tctcatccaa aaaggaaaga cgaaagaaaa catcatcaac accacctctg
     1321 ccgccaccgc ttccaccgcc gtatactgcg acgcgtgcac caagacctac taccacgcgc
     1381 gtatccccat ttgtaacgga aaaacctaga gttccaataa aaatgaattt ttttaacagc
     1441 attgatgata gttctagtgg cggtgaatct ccgatgaatc gaattccacc gccgccacca
     1501 atgccgccgt ttaagatgcc ggattggaag tttcctgttg aaggtgatta tgtaagggta
     1561 cagagtacac tgaactccga tagtgggtca ccggaaggag atgaatcaca atcgccgtca
     1621 tctgcagtgg cgtcgccgtt attttgtccg agcccggatg tggatacaaa agcggatact
     1681 ttcattgcaa ggtttcgggc cgggttaaaa cttgaaaaga tgcattcgtt taatgcaaat
     1741 caaagcaaaa ggatgtctaa tcttggccca ggaccaggcc caagtcaaag taatcggttt
     1801 tgaacgcttt taatttttaa aatatgattt ctttgtattt gtatatttgt attgtatttt
     1861 tctttattga tttgttttta ttttgttacg tattggtggt gtgggtatgt gagatgacag
     1921 taatgatttt gttggtatta gatttgggat gatgaagaac atgtgatt
//
LOCUS       XM_071833043            1005 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842946), mRNA.
ACCESSION   XM_071833043
VERSION     XM_071833043.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1005
                     /gene="LOC139842946"
                     /note="uncharacterized LOC139842946; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842946"
     CDS             1..1005
                     /gene="LOC139842946"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689144.1"
                     /db_xref="GeneID:139842946"
                     /translation="MNTSSYQIYNNFKQRESSVNLIKKFGNPKYDSTKPDSKQPTEQI
                     DKSRITSYLFNNFPDDWCSIDFWDIFKKYGNIHEVYIPKKRLKNGRKFGFVRYLDVPD
                     YHKESLARRLNLIVIGDHLIKVYKAHDSDIKKQDGYQQATKSARGINVKTASSSSIDG
                     RNFRDVILNRQASNNNIPSVKVNSNFELIQILGQVVIAKVRGLEYLEYLSEICESENL
                     SGFTIKYLGGHDLMLIFEESNPALDLINNSEHPLWKWLEDINPWDPEVYKSSGRLAFV
                     NIYGVPITCWLESTFIDIAKNWGEVIETINCSIINENNQDLSHGSVIVKTNNFSPING
                     "
     misc_feature    166..372
                     /gene="LOC139842946"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cd00590"
                     /db_xref="CDD:409669"
     misc_feature    <658..969
                     /gene="LOC139842946"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
ORIGIN      
        1 atgaacacgt cctcctacca gatctataat aatttcaaac aacgtgaatc atctgttaat
       61 ctcatcaaaa agtttggaaa ccctaaatat gattcgacaa agcctgactc taaacagcct
      121 actgaacaga ttgataaatc caggataacc tcttatctct tcaacaattt ccctgacgat
      181 tggtgttcta tcgacttctg ggatattttc aaaaaatatg gcaacattca tgaggtttat
      241 atccctaaga agaggctaaa aaacggaaga aaattcgggt ttgttagata tctagatgtc
      301 cccgattatc ataaagaatc ccttgcaaga cggttaaatc taattgtgat cggtgaccat
      361 ctgattaagg tatacaaagc acacgattcc gatattaaga agcaagatgg ttatcagcag
      421 gctactaaat cagcccgagg tataaatgtt aaaacagcat cctcttcttc gattgatggc
      481 agaaatttca gagacgtgat cctcaacaga caggcttcaa acaataatat tccatcggtt
      541 aaggtaaatt ctaatttcga actcattcaa atacttggac aagtcgttat tgctaaagtc
      601 agaggtcttg aatatcttga atacttaagt gaaatctgcg aaagtgaaaa ccttagtggt
      661 tttacaatta aatacttagg tggtcatgat ttaatgctta tctttgagga atctaatccg
      721 gcccttgatt tgataaacaa ctcggaacat cctctttgga aatggcttga ggacattaac
      781 ccatgggatc ccgaggttta taaatcctct ggtagacttg cttttgttaa tatctatggg
      841 gttcctatca cttgttggtt agaatccact ttcatcgata tcgcaaaaaa ttggggagag
      901 gtaatcgaaa caattaactg ctcgatcatc aatgaaaaca atcaagactt atcccacggt
      961 tcggttattg tcaaaacaaa taacttctct ccgataaatg gctaa
//
LOCUS       XM_071833044            2587 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides subtilisin-like protease
            SBT1.4 (LOC139842947), mRNA.
ACCESSION   XM_071833044
VERSION     XM_071833044.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2587
                     /gene="LOC139842947"
                     /note="subtilisin-like protease SBT1.4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins"
                     /db_xref="GeneID:139842947"
     CDS             1..2328
                     /gene="LOC139842947"
                     /codon_start=1
                     /product="subtilisin-like protease SBT1.4"
                     /protein_id="XP_071689145.1"
                     /db_xref="GeneID:139842947"
                     /translation="MARSSLPSSYLLSLLLLLFLSIISISISIHEQDTDQTSTYIIHV
                     SKSDKPTTFSTHKSWYSSIVRSVSSSHQPSDLLYTYEHSVNGFSVRLTRSQAVKLRRA
                     PGVLSVIPDRRRTLHTTHTPKFLGLADNFGLWPNAEYGDDVIVGVLDTGIWPERPSFS
                     DEGLPPVPSTWKGSCDVFPDFPKTACNRKIIGAKAYYRGYIASSANRLNAWNGMLSPR
                     DTEGHGTHTSSTAAGSVVEDAGFFDFAKGEARGMAVKARIAVYKICWDAGCYDSDILA
                     AMEQAISDGVHIISLSVGANGYAPNYYQDSIAIGAFHAMKNGILTSCSAGNSGPGAYT
                     AVNIAPWIFTIGASTIDREFPADVVLGDGRVYSGVSLYSGDGLGDVQYPLIYARDAGD
                     RYCYSGKLNATLVTGKIVICDRGGNARVDKGNAVNEAGGVGMIHTNLDENGEELLADA
                     HVIPATMLGCTAGDKVKEYLRSAASPTATISFRGTVIGTSPSAPRVASFSSRGPSYRT
                     AEIIKPDVIGPGVNILAGWTGYTSPTSLDTDPRRVDFNIISGTSMSCPHVSGLCALLR
                     KAHPTWSPAAIKSALMTTARFLDNIGENITDLATGVQSTPFVHGSGHVDPNRALNPGL
                     VYDAGVDDYVAFLCAIGYDSKKIAIFAKDPVDCSAVSLTSPGGLNYPSFSVVFDSKSA
                     GIVKYKRVVKNVGSDVNAVYKVSVSAPPGVDVVVSPMKLIFSEAKKEIEYEITFSSIK
                     GGAAAFGSIEWSDGSHNVRSPIAVQWSSSKWQMSM"
     misc_feature    115..351
                     /gene="LOC139842947"
                     /note="Peptidase inhibitor I9; Region: Inhibitor_I9;
                     pfam05922"
                     /db_xref="CDD:428674"
     misc_feature    343..1755
                     /gene="LOC139842947"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; Region: Peptidases_S8_3; cd04852"
                     /db_xref="CDD:173795"
     misc_feature    order(445..447,667..669,820..822,877..879,979..981,
                     1654..1656)
                     /gene="LOC139842947"
                     /note="active site"
                     /db_xref="CDD:173795"
     misc_feature    order(445..447,667..669,1654..1656)
                     /gene="LOC139842947"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     misc_feature    1069..1440
                     /gene="LOC139842947"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     Region: PA_subtilisin_like; cd02120"
                     /db_xref="CDD:239035"
     misc_feature    1330..1338
                     /gene="LOC139842947"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]; other site"
                     /db_xref="CDD:239035"
     misc_feature    2002..2292
                     /gene="LOC139842947"
                     /note="Fibronectin type-III domain; Region: fn3_6;
                     pfam17766"
                     /db_xref="CDD:465493"
     polyA_site      2587
                     /gene="LOC139842947"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggcaagga gttcactccc ttcttcctat ctgctttcct tgttattatt attattcctc
       61 tctattatat ctatctctat atctatacat gaacaagata ccgatcaaac aagtacttac
      121 atcatccacg tgtcaaaatc cgataaacct accacgtttt ccactcataa aagctggtac
      181 tcctcaatcg tccgatcagt ctcttcatca caccaaccgt ccgatctgtt gtacacttat
      241 gaacactcgg tcaacggttt ctccgttagg ttaactcgat ctcaagccgt taagcttcgt
      301 cgtgctcccg gtgtactctc cgtcatcccc gatcgtcggc gaacacttca cacaacacac
      361 acacctaaat ttttaggtct agctgataac ttcggtctct ggcctaacgc tgaatacggc
      421 gatgacgtca tcgtgggagt actcgatacc ggaatctggc cggaaaggcc gagtttctcc
      481 gacgaaggac ttccgccagt tccgtccact tggaaaggta gctgtgacgt gtttcctgat
      541 tttccgaaga ccgcgtgtaa tcggaaaatc atcggagcta aggcgtatta tcgtggttac
      601 atagctagtt cagcgaatcg tttgaatgct tggaacggta tgctatcgcc tagagacact
      661 gaaggtcatg gaacacatac gtcttcaact gcggcaggat cagttgttga ggatgccgga
      721 tttttcgatt tcgctaaggg cgaagccaga ggtatggctg ttaaagctag aattgcggtt
      781 tataagatct gctgggatgc aggttgttac gattccgata ttctcgctgc tatggaacaa
      841 gctattagtg acggtgtaca tattatatca ctttcagttg gtgctaatgg ctatgcacct
      901 aattattatc aagactcgat cgctattggg gcttttcacg ccatgaaaaa cggaattcta
      961 acttcgtgtt cagcaggtaa ttcaggtcct ggtgcgtaca ccgcggttaa tatcgctccg
     1021 tggatattta caatcggtgc ttcgacgatc gatcgagagt ttccggcgga tgttgttctc
     1081 ggagacggaa gagtttacag cggtgtatcg ctttactccg gtgacggact aggagacgtt
     1141 cagtatccgt taatttacgc gcgtgatgct ggtgatcgat actgttacag tggaaagtta
     1201 aatgctactt tagttaccgg taaaattgta atttgtgatc gtggaggtaa tgctagggtt
     1261 gataaaggta atgcggttaa tgaagccggt ggtgttggaa tgatccacac gaatttagac
     1321 gaaaatggcg aggagctttt agctgatgcg catgttattc cggcaacgat gctcggctgc
     1381 actgccggag ataaagtgaa agagtatttg cgttccgctg cttcgcccac agcgacgatt
     1441 agttttaggg gaacggtgat cggaacatca ccttctgcgc cacgtgtggc gtctttctct
     1501 agccgcggtc caagttatag gaccgcggaa atcattaaac cggatgtgat tgggcctggt
     1561 gttaacatat tagctggttg gaccgggtat actagcccaa cttcattgga tacggatcct
     1621 agacgggtgg acttcaatat catatcaggg acgtcgatgt cgtgtcctca cgtgagtggc
     1681 ttatgcgcct tattacgtaa ggcacacccg acgtggtccc cagctgctat taaatctgct
     1741 ttgatgacta ctgctaggtt tttggacaac attggtgaaa acattaccga tcttgcaact
     1801 ggtgtgcaat ctacaccgtt tgttcatgga tcgggccacg tggacccaaa tagagcactt
     1861 aaccccgggt tggtgtatga tgctggggta gatgattacg tggccttcct ttgtgccatt
     1921 ggatatgatt ccaagaaaat agcaattttt gcaaaggatc ctgtggattg tagtgcggtg
     1981 agtttgacta gccccggtgg gttaaactac ccctcgtttt cggttgtgtt tgattcgaaa
     2041 agcgcaggca ttgtgaagta taaaagggtt gtgaagaatg taggtagtga tgtgaatgcg
     2101 gtttataagg tgagtgtaag tgctccaccc ggggtggacg ttgttgtgtc accgatgaaa
     2161 cttatcttta gtgaggcgaa aaaagagatt gaatacgaga tcacgtttag ttctatcaag
     2221 ggtggagctg cagcttttgg ttcgattgag tggagtgatg gaagccataa tgtgagaagc
     2281 ccgattgccg ttcagtggag ttcgagtaaa tggcaaatga gcatgtaatt gtggttctgt
     2341 ttttcgaatg ctgtctcaaa cacaagaaag atggatattg tgttttactt tttaaggtta
     2401 agttagttgg taagttgttg cattgtaagc tttacttctt tgttttgatt gctggcccaa
     2461 atctatttct ttgttttgat ttgagttggg cttgcatcac aataatgtat catgtgtcac
     2521 ttgctcttgt tgtaaaaata gaacatgttc aagggttaat attacacgta cccttatttt
     2581 cttttaa
//
LOCUS       XM_071833045             567 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842948), mRNA.
ACCESSION   XM_071833045
VERSION     XM_071833045.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..567
                     /gene="LOC139842948"
                     /note="uncharacterized LOC139842948; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842948"
     CDS             1..567
                     /gene="LOC139842948"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689146.1"
                     /db_xref="GeneID:139842948"
                     /translation="MEEWRTLRFLDFKKVNEYSSAMFKICSQLQFCGHEINDADMGNA
                     HGRGRGKGRGNNGQYHHNGNYHNNGKNHNYGRSHPYGNSRGRGRNRGRGRGYGQRNNN
                     TRNYRPQPPNKPTEQDVEGNSSRNPEEPCYICGSVGHWARTRRTPEHLVELYKKSLKD
                     NEKEVNHVDNLDLVKAEPTSEFFDGLDF"
ORIGIN      
        1 atggaagaat ggagaactct gagatttctg gactttaaga aagtgaatga atatagttca
       61 gctatgttca agatatgttc acaacttcaa ttttgtggac acgaaattaa tgatgctgat
      121 atgggtaatg cacatggacg aggacgtggg aaaggtcgtg gtaataatgg tcaataccat
      181 cacaatggca attaccataa caatggcaaa aaccataact atggtcggag tcatccgtat
      241 ggtaatagtc gtggtcgtgg tcgtaaccgt ggccgtggtc gtggatatgg tcaaagaaat
      301 aataatacac gaaattatag accacaacca ccaaataagc ccaccgaaca agatgttgaa
      361 ggaaactctt caaggaatcc tgaagaacct tgttacatat gtggtagtgt tggccattgg
      421 gctagaacac gtagaacacc tgaacatctt gttgagctct ataaaaaatc cttgaaagat
      481 aatgaaaagg aagtgaatca tgtggataac cttgatttgg tcaaggccga accaacttca
      541 gagttcttcg atggcttaga tttctaa
//
LOCUS       XM_071833046            1563 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842950), mRNA.
ACCESSION   XM_071833046
VERSION     XM_071833046.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1563
                     /gene="LOC139842950"
                     /note="uncharacterized LOC139842950; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842950"
     CDS             1..1563
                     /gene="LOC139842950"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689147.1"
                     /db_xref="GeneID:139842950"
                     /translation="MKTQHWSDEVACHLFPTVLQSAAREWFAKLPPNGITCFADLREK
                     FLMQYQNLRQHTFTHLYAYEIPMYRREKIESFITRYMLECQKISGLPETQQISGFITC
                     LDKEAHPSLIAEIRWNISSTFADAVTVARQYQHSGREWQAGYHRDEKKRDNERRSDSR
                     HHHDESRRSDSPHRSHNSHGKSHDGHRHDKSNRRPYDKGSLLDNLTKTPREILLAEPS
                     KAKLTPPAPFEKREGQKSDKYCEFHEDHGHDTDECKALMREIIAKIKAADPNKTFSWQ
                     KEDGKKREKVKDKVVINMISIEKDELNPWREAALMFPKLPARYARNEPVVIDGLIDGF
                     RVREMYTDNGSEVDVLYAHYLSQLPKCVSRKMRQSNAVISGFTGSTEEPIGRIKATVT
                     VGTQPYLRSEVIDFYVIRSVITKNVILGRNFFRKFNAITSTAHSLLKFLTRKGVTTVE
                     STRQPFPEKVNTQVTRSITARKTPHTLEEKRVSVLKRISYFPPSARANKKSPTNSYKI
                     EQKSVGWHYQLG"
     misc_feature    979..1275
                     /gene="LOC139842950"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(1024..1026,1030..1032,1036..1038,1117..1125,
                     1252..1254)
                     /gene="LOC139842950"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    1024..1032
                     /gene="LOC139842950"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    1024..1026
                     /gene="LOC139842950"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(1117..1128,1138..1149)
                     /gene="LOC139842950"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgaaaaccc aacattggag tgatgaggtt gcatgccatc tctttccgac tgtcctacag
       61 tctgctgcta gagagtggtt cgctaaactg ccaccaaacg gtatcacatg cttcgcagat
      121 ctacgggaaa agtttctcat gcaatatcaa aatcttcgcc agcacacgtt tacacacttg
      181 tatgcctatg agataccaat gtaccgaaga gagaaaattg aaagtttcat cacaaggtac
      241 atgctggaat gtcaaaaaat ctcagggctt ccggaaacac agcagatttc cgggttcata
      301 acttgcctag acaaagaagc acacccgtct cttattgccg aaattcgatg gaacatctcg
      361 agtacattcg cggatgccgt gacagtagca aggcagtatc agcattctgg gcgggagtgg
      421 caagctgggt accaccgaga tgagaagaag cgagacaatg aaagaagaag cgatagtagg
      481 caccatcatg atgaaagccg acgcagtgac agtccccaca gaagtcataa cagtcacggc
      541 aaaagccatg acggtcacag gcatgacaaa agcaaccgaa gaccatatga taagggctct
      601 cttcttgaca acttgaccaa aactccaagg gagatactgc tagcagagcc atcgaaagcc
      661 aaattgactc ctccggcacc atttgagaaa cgggaaggtc aaaaatccga caagtactgt
      721 gagttccacg aggaccacgg tcatgacact gacgaatgta aagcgttaat gcgagagata
      781 attgcaaaaa taaaggctgc tgatccaaac aagacattta gttggcagaa agaagacggc
      841 aagaagcgtg agaaagtaaa agataaggtt gtaattaaca tgatcagtat tgaaaaagac
      901 gagctcaacc cctggagaga agccgcactc atgttcccaa agctaccggc acgctacgct
      961 cgaaatgagc ctgtggtgat tgacggcttg atagacggct ttcgagttcg agaaatgtac
     1021 actgacaacg ggagtgaggt tgatgtctta tatgcccatt acctttctca actcccgaaa
     1081 tgtgtcagta ggaaaatgag acagtccaat gctgtcatct ctgggttcac gggctctact
     1141 gaagaaccta taggaagaat caaggcaacg gtcacggtag gcacccagcc ctacctccgt
     1201 agtgaggtca ttgacttcta cgtcatcaga tccgtcatca ccaagaatgt gatattggga
     1261 agaaacttct tcagaaagtt taacgccata acctccaccg ctcacagttt gcttaaattt
     1321 ctaactcgaa aaggcgtgac aacggttgaa tccacccgac aacccttccc ggaaaaagtt
     1381 aatactcaag tcacacgaag catcacagca agaaagacac cacacacctt ggaagaaaaa
     1441 cgtgtgtcag tgcttaaacg gataagttac tttcctccat cagcgcgcgc caacaaaaag
     1501 agcccgacta attcttacaa gattgaacaa aaaagtgtcg gctggcacta tcagctggga
     1561 tag
//
LOCUS       XM_071833047             738 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cyclin-A1-1-like
            (LOC139842951), mRNA.
ACCESSION   XM_071833047
VERSION     XM_071833047.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..738
                     /gene="LOC139842951"
                     /note="cyclin-A1-1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins"
                     /db_xref="GeneID:139842951"
     CDS             1..738
                     /gene="LOC139842951"
                     /codon_start=1
                     /product="cyclin-A1-1-like"
                     /protein_id="XP_071689148.1"
                     /db_xref="GeneID:139842951"
                     /translation="MHRTITPYLPPLRAFIDRGTSMNLEEIYPPKMKLFFDLCPDYYS
                     DEDVVEKMQDLVLETLDFDLFVVTVVSVLSRFVRVAAQGVKEEEKVPLKCLAYYISEF
                     SLLEYDMLRYPPSLIAASAIFLARYVLFPSHKPWNSTLRDYTHYQPSDLYECVKALHA
                     LVTECPKPILPEIREKYHKDKYKCVADKYSCPPSIPFEHFHNISTAQLVIDRSKQQED
                     LNSVVLDGDAMYKFPNGAAKKHRSFKR"
     misc_feature    <70..189
                     /gene="LOC139842951"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
     misc_feature    202..546
                     /gene="LOC139842951"
                     /note="Cyclin box fold superfamily; Region: CYCLIN_SF;
                     cl40454"
                     /db_xref="CDD:477360"
ORIGIN      
        1 atgcaccgca cgataacacc atacttgccc ccattgcgag catttatcga tcgtggcact
       61 tcgatgaatt tggaggagat atatccaccc aaaatgaaac tcttcttcga cttgtgtccc
      121 gactactact ctgatgaaga cgtggtagag aaaatgcaag atttggttct ggaaaccttg
      181 gattttgatt tgtttgtcgt aaccgttgta tctgttttga gtagatttgt tcgtgttgct
      241 gctcaaggtg taaaagagga ggagaaggtt cctttaaagt gtttggcata ctacatatct
      301 gaattctctc ttttggagta tgatatgctt cgttatcctc cttctcttat tgctgcatct
      361 gctattttct tagcaagata tgtgcttttt ccatcacaca aaccttggaa ttcgacttta
      421 agggattata ctcactacca accatcagat ttatacgagt gtgtaaaagc tctacatgca
      481 cttgttactg aatgcccaaa acccatattg ccagaaatca gagaaaagta ccataaagat
      541 aagtacaagt gcgtagcaga caagtattct tgtcctccat cgataccatt tgagcatttt
      601 cacaatatca gcacagctca gctagtaatt gatagatcga agcagcaaga agatctcaac
      661 agcgttgtct tggatggaga tgctatgtat aaatttccaa atggtgcagc caaaaaacac
      721 cgtagcttca aaagataa
//
LOCUS       XM_071833048            1437 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842953), mRNA.
ACCESSION   XM_071833048
VERSION     XM_071833048.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1437
                     /gene="LOC139842953"
                     /note="uncharacterized LOC139842953; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842953"
     CDS             1..1437
                     /gene="LOC139842953"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689149.1"
                     /db_xref="GeneID:139842953"
                     /translation="MKIISINSCGSKVFSKRKWIKDLCVTENVQFLALQESKMTRLQL
                     FRLESMWGNNQFDYALSLARGFSGGIISMWNPHSFVKENVWCFNHYLIVKVLWVRENI
                     DVYMINVYAPQRLSDKVCVWNSITNFMASNNGDYILFGDWNSVREESERCGTEFSARD
                     AHFFNDFIERSSLHEVVLGGLKYTWRLKDGSKFSKLDRFFVTNNIMSSLEDLKGKVLP
                     RGFSDHSPIMLFQDKIDFSPTYFKVFDSWFERHDFDSKIHHSRSTEFTHLRDLKQSII
                     DLDLIIDTGTATAAEIESRHNFFKEQEDLTRLASLYALQKSRVKWDVEGDENSKYFHC
                     YLKRKQKQQHIHGLMINGTWVTDPTTIKDMFFDLFSAKFEQAQSAVFFEPVSPIRSLT
                     ADDASLLEADFDGDEIEKAVWDCGSSKSPGPDGVYGIYGVVGVADAGNTVSDVDGTAN
                     AGGVDGTADADDADGTDVNACNVSSMKL"
     misc_feature    7..687
                     /gene="LOC139842953"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,106..108,328..330,421..423,427..429,589..591,
                     667..672)
                     /gene="LOC139842953"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(106..108,667..669)
                     /gene="LOC139842953"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(328..330,427..429,670..672)
                     /gene="LOC139842953"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgaagatca tctccatcaa tagttgcgga tccaaagttt tttcgaaacg gaaatggatc
       61 aaagatttat gtgtcacgga aaacgtacag tttcttgctc ttcaagaatc gaagatgacc
      121 cgacttcaat tgtttcgtct tgagtccatg tggggtaaca atcaattcga ttatgcttta
      181 tcgttggctc gtggtttctc ggggggtatc atttctatgt ggaaccctca ttcgtttgtt
      241 aaagaaaatg tgtggtgctt taaccactat ctcatcgtta aagttctatg ggtgcgagag
      301 aatattgatg tgtacatgat aaatgtttat gctccacaac gtctctcgga caaagtttgt
      361 gtatggaatt cgattacaaa ctttatggct tcgaataatg gtgattatat tctttttgga
      421 gattggaatt cggtccgaga ggaaagtgaa cgatgtggta ctgagttttc ggcccgagat
      481 gctcattttt ttaatgattt catcgaaaga tcctctcttc atgaagttgt tcttggcggc
      541 cttaaatata cttggaggct taaagatgga agtaaattta gcaaattgga ccgttttttc
      601 gttactaata acatcatgtc ttctttagaa gaccttaagg gcaaggttct cccgaggggt
      661 ttttcagatc attctcctat catgctcttt caagacaaga tcgattttag ccctacttac
      721 ttcaaagtgt tcgattcttg gttcgaaaga catgattttg attcaaagat acatcattcg
      781 agaagcactg aattcaccca tttacgtgat ctaaaacaaa gtattattga tcttgacttg
      841 atcattgaca caggtactgc taccgctgct gagatcgaat cacgccataa tttttttaag
      901 gaacaggaag atcttacacg tcttgcctca ctttatgctc tccaaaagtc gagggtaaaa
      961 tgggacgtag aaggtgacga gaattctaaa tattttcatt gctacttaaa acgtaaacaa
     1021 aaacaacaac acattcacgg gcttatgatt aacggcacat gggtcaccga tcctactact
     1081 attaaagata tgttctttga cctttttagc gccaaatttg aacaggccca atcggctgtt
     1141 ttttttgaac ctgtcagccc aattcgttca ttaacagcag atgatgcttc gttgttggaa
     1201 gctgactttg atggggatga aattgaaaaa gccgtgtggg attgcgggag ttccaagtct
     1261 cctggtccag acggagttta cggaatttat ggtgtagtag gtgttgctga tgccggtaat
     1321 actgttagtg atgttgacgg tactgctaat gctggtggtg ttgacggtac tgctgatgct
     1381 gatgatgccg acggtactga tgttaatgct tgtaatgttt cgtcgatgaa gttatga
//
LOCUS       XM_071833049            1098 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842954), mRNA.
ACCESSION   XM_071833049
VERSION     XM_071833049.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 65% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1098
                     /gene="LOC139842954"
                     /note="uncharacterized LOC139842954; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842954"
     CDS             1..1098
                     /gene="LOC139842954"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689150.1"
                     /db_xref="GeneID:139842954"
                     /translation="MAMTKENPFVDWFPDTRKNGALCTVGRPGYSSSIGSRKNFPSKW
                     DDAEKWVVNGHESPAHGVVKSHDFIEKHQKTISVFQGPKIASLDHHDGCSDKALNGSL
                     ASESIDVLLKDKFTNEVEPAFPKYNCLESMSEGLLLKKTMENTISKPKMEAIQEAKNR
                     DMGTEMTPIGSSTNSRSPTPSKNLSPPRHNTPESRLLLMDNHSNLFDIGKAKIQPWTP
                     FDANWSSREDEEEEISKSLRLFEMNNDCLEIISGPRPSAWEEKEMSQPCIRYQIQEAK
                     IKAWVNLQKAKAEAQSRKLEVKIQKMRAKYEEKTMKKMMVVNRKAEELRAAAQLEHSE
                     TMAKSNKTMNHRPSVGLSGHHGSCGCLIGNR"
     misc_feature    766..1014
                     /gene="LOC139842954"
                     /note="Remorin, C-terminal region; Region: Remorin_C;
                     pfam03763"
                     /db_xref="CDD:427493"
ORIGIN      
        1 atggcaatga caaaggagaa cccatttgta gattggtttc ctgacactag aaaaaatgga
       61 gctttatgca cagtgggtcg acccggttat agttcaagta ttgggtcaag aaagaatttt
      121 ccttcaaaat gggatgatgc tgaaaaatgg gttgtgaatg gtcatgaatc ccctgctcat
      181 ggtgttgtaa agtctcatga ttttatagaa aaacatcaaa aaacaatttc tgtatttcaa
      241 ggtccaaaaa ttgcatcttt ggaccaccat gatgggtgtt cagataaagc tttgaatggg
      301 tccttagcct cagagtccat tgatgtgctt cttaaagata aatttacaaa cgaggtagaa
      361 cctgcttttc caaagtacaa ttgtttggag tcaatgagtg aaggattgtt actcaagaaa
      421 acaatggaga acacaattag caaaccgaaa atggaagcga ttcaagaggc gaaaaaccga
      481 gacatgggga ccgaaatgac tccaataggc agcagcacaa actcacggtc cccaacacca
      541 tcgaaaaact tgtctccacc acgacataac actccagaaa gtaggttact attaatggat
      601 aatcatagta acttgtttga tattggtaaa gctaagatac aaccatggac cccatttgat
      661 gcaaattgga gctcgagaga ggacgaagaa gaggaaatat cgaaaagttt gcgacttttc
      721 gagatgaata atgattgtct tgaaattata tcaggtccta gaccttctgc ttgggaagaa
      781 aaagaaatgt ctcaaccttg cataaggtat caaatacagg aagcaaaaat taaagcatgg
      841 gtgaatctgc aaaaagccaa agcagaagct caatcaagaa aacttgaggt aaagattcag
      901 aaaatgagag cgaaatatga agagaagacg atgaaaaaga tgatggttgt taatcgaaaa
      961 gcagaggagt taagggctgc agctcagctc gagcattcgg agacgatggc taaatcaaac
     1021 aagacaatga accatcgacc tagtgtcggt ttatcgggtc accacggttc gtgtggttgt
     1081 ttgatcggta atcgatag
//
LOCUS       XM_071833050            1071 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842955), mRNA.
ACCESSION   XM_071833050
VERSION     XM_071833050.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1071
                     /gene="LOC139842955"
                     /note="uncharacterized LOC139842955; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842955"
     CDS             1..1071
                     /gene="LOC139842955"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689151.1"
                     /db_xref="GeneID:139842955"
                     /translation="MCTISLNIRGIGQTGKISWLKRICNKEKPTILGLQETKCGQTGD
                     NTIESFWGNSDFKFVQKDSVGASGGILTIWDTNIFSFNYAIEGEFFLAIRGTWAGHDS
                     EIAFINVYGPHSSSKKLRLWNELSSLINSLNIPHIVFGDFNEVRNKTERMNTDCNQHW
                     ADNFNNFINNSGLIDLPLGGKRFTRICEKTMKFSKLDRFLVSDGIFTIWPNTSSKTLD
                     RDLSDHCPIILRNNLLDSGPKPIRVFDTWLDLKDADIVIERAWSIPTTGNRPDCIFRN
                     KLKNVKMELKKHSIQLDNIDSQIRDHISECNNWEQTAETRPLSESEKQKWIDEKMQQT
                     VAIIKSSPKYSPIALQRSSIKS"
     misc_feature    10..690
                     /gene="LOC139842955"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(19..21,106..108,328..330,421..423,427..429,589..591,
                     667..672)
                     /gene="LOC139842955"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(106..108,667..669)
                     /gene="LOC139842955"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
     misc_feature    order(328..330,427..429,670..672)
                     /gene="LOC139842955"
                     /note="putative phosphate binding site [ion binding];
                     other site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgtgtacaa tttctttaaa tattcggggt attggacaaa cgggtaaaat aagttggcta
       61 aaacgtatct gcaataaaga aaaaccaacg attttaggtc tacaagaaac caaatgcgga
      121 caaacaggtg ataacaccat tgaatctttc tggggtaatt ctgattttaa attcgtccaa
      181 aaggactcgg ttggtgcttc cggtggtatc ttaactattt gggatactaa tatcttttcg
      241 ttcaattatg cgattgaggg cgaattcttc ttagcaatac gcggaacatg ggcagggcat
      301 gattctgaaa ttgctttcat taatgtatat ggtcctcatt cttcctcaaa aaaactaaga
      361 ctctggaacg aactctcatc tctcattaac tctcttaaca ttccacacat tgtctttggt
      421 gactttaatg aagtaagaaa caaaacagaa cgcatgaata cagattgcaa tcaacattgg
      481 gcagataatt ttaataattt cataaataac tccggattaa ttgatcttcc attaggtgga
      541 aaaagattca caaggatatg tgagaaaaca atgaaattca gtaaacttga ccgattcctt
      601 gtctctgatg gcattttcac catctggccc aatacatcct ccaaaactct tgatcgtgat
      661 ctttccgatc actgtcctat cattctaaga aataacctcc tcgattcagg ccctaaacca
      721 atacgtgttt ttgacacatg gctcgacctt aaagatgccg acattgtcat tgaaagagcc
      781 tggtcgattc cgactactgg taataggcca gactgcatct tccgtaataa attaaaaaac
      841 gtaaaaatgg agctcaaaaa acatagtatt caacttgata acattgactc acaaatccga
      901 gatcatatat ctgaatgtaa taattgggaa caaactgccg aaaccagacc attatctgaa
      961 tcggaaaaac aaaaatggat cgatgaaaaa atgcagcaaa ctgtagctat tataaaatcc
     1021 tcaccaaaat actctccaat cgccttgcaa aggtcatcca taaagtcata g
//
LOCUS       XM_071833051             762 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842956), mRNA.
ACCESSION   XM_071833051
VERSION     XM_071833051.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..762
                     /gene="LOC139842956"
                     /note="uncharacterized LOC139842956; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842956"
     CDS             1..762
                     /gene="LOC139842956"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689152.1"
                     /db_xref="GeneID:139842956"
                     /translation="MVVAVSNRNRITMGQCHKKHIRAGWWKKLGDGRDALFWEDVWIG
                     DVALKNKFARLFRLDNNQDAYVNDRVQHVNGLIQFTWAWTRPPLGRVTDELEQMKGLI
                     EGSSLLSNGSSTWQWKLDNSGGYNSRLVSLKIDERIIGRPGKLHDTMRNNYIPQKMGI
                     FVWRALRDRIPVRVELDKRGIDVDTILCPMCNDFVETVEHTLITCKLAKDVWQAIYNW
                     WESTPPNSSDLSDFFSGTGRGNLSGENKKIWQAIG"
     misc_feature    <451..633
                     /gene="LOC139842956"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtggtgg cggtttcgaa ccgaaaccga atcaccatgg gtcaatgtca taaaaagcat
       61 atacgggcgg gatggtggaa gaaactaggc gatggacgtg atgcgctctt ttgggaagac
      121 gtatggattg gtgacgttgc attaaaaaat aaattcgcta gacttttcag gctcgataac
      181 aaccaagacg cgtacgtgaa cgatcgagtg cagcatgtta atgggctgat tcagtttaca
      241 tgggcatgga cacgaccccc attgggtcgc gttactgacg aactagaaca aatgaaaggt
      301 ctgatcgagg gcagttcact tttgagcaat ggcagctcaa catggcagtg gaaactagat
      361 aactcaggag gctacaattc gaggttagta tcattaaaaa ttgatgaacg tattattgga
      421 agaccgggta aactacatga cacaatgaga aacaattata ttccccaaaa aatgggtata
      481 tttgtttgga gggcccttcg agatagaatc ccggttagag tggaacttga caagcgtgga
      541 atagatgtgg ataccatttt atgtcctatg tgtaatgatt tcgtcgaaac ggtggaacat
      601 actctcatca cgtgtaaatt agcaaaagat gtttggcaag ctatctataa ttggtgggaa
      661 tcgactcctc ccaattctag cgacttatca gacttctttt ccggtacggg tcgaggaaat
      721 ctatcgggcg aaaacaaaaa aatttggcaa gctatagggt aa
//
LOCUS       XM_071833052            1419 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842957), mRNA.
ACCESSION   XM_071833052
VERSION     XM_071833052.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1419
                     /gene="LOC139842957"
                     /note="uncharacterized LOC139842957; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842957"
     CDS             1..1419
                     /gene="LOC139842957"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689153.1"
                     /db_xref="GeneID:139842957"
                     /translation="MSLNIRGFGVGKESKIGWVKGLCRGEKPNIVMLQETKLHTVDLN
                     WVRGLWGNNNCNFVQKEMVGKSGGQLIIWDVDCFDVTNSFIHDYCIGIRGKWKNADKE
                     FNILNVYGPHDDLNKQKLWDFLHNLVSNNSNQAWMIGGDFNEVRNVNERFNCNFIESR
                     AKKFNDFIENSKLLDIPLGGSYFHTVALERGKSDHCLIILKDDVRNFGPKPIKVFDDW
                     LNIEGVKECMKEVWAEDVGGGSRLDCGLRNKLKKNQSSFKDKKFTKIWQFRWKEWFQR
                     EKIKSNMLKQKARVRWVLEGDENTKYFHSAYGLESAIEESEIVEAINDCGSGKAPGPD
                     GFNIRFFKKFWDVIKGDVINAISWFWEKREFSKGCNASFVTLIPKKNDPITLDDYRPK
                     SLIGSFYKTVAKILSNRLRKVIPRLVGSKQSTFSRERYILDGVFVANETIEFLKSNRK
                     QGLIFKVDFEKACCVKSVFSST"
     misc_feature    1..429
                     /gene="LOC139842957"
                     /note="Endonuclease/Exonuclease/phosphatase family;
                     Region: Exo_endo_phos; pfam03372"
                     /db_xref="CDD:460902"
     misc_feature    1111..>1386
                     /gene="LOC139842957"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtctttaa acataagagg ttttggggtg gggaaggaaa gcaaaattgg ttgggttaaa
       61 gggctgtgtc ggggtgaaaa acctaacatc gtgatgcttc aagaaacgaa attacacact
      121 gtcgatttaa attgggttcg tggattatgg ggtaataata attgtaattt tgttcaaaaa
      181 gagatggtcg ggaagtcagg gggtcaatta atcatatggg atgtagattg tttcgatgtc
      241 actaattcgt ttattcatga ctattgtatt gggattcgag gtaaatggaa gaacgcggat
      301 aaggaattca acatattgaa tgtttacggg ccgcacgatg acctcaacaa gcaaaaatta
      361 tgggattttc tccataattt agtttctaac aatagtaatc aggcgtggat gattggaggt
      421 gatttcaatg aggttcgcaa cgttaatgaa agattcaatt gcaactttat tgaatctagg
      481 gcgaagaagt tcaacgattt catcgaaaac tccaagttac tcgacattcc attggggggg
      541 tcatattttc acacggtcgc actagaacgg gggaagtcag atcattgcct aatcatttta
      601 aaagatgatg ttaggaactt tggaccgaaa ccgattaagg tgtttgatga ttggctaaat
      661 attgaaggtg ttaaggagtg tatgaaagaa gtttgggccg aagatgttgg tggtggttct
      721 cgtttagatt gtggcttaag gaataagctt aaaaaaaacc aaagtagctt taaagacaaa
      781 aagttcacaa aaatttggca atttagatgg aaggaatggt ttcaaaggga gaaaatcaaa
      841 agtaacatgt tgaaacaaaa ggcgagagta cgatgggttc tcgagggtga tgagaatacc
      901 aagtattttc actcggctta cgggttagag tcggccattg aggaatcaga gattgtagag
      961 gcaattaatg attgcggtag tgggaaagct ccgggtccgg atggtttcaa cataagattc
     1021 tttaagaagt tctgggatgt tattaaaggg gatgtgatta atgcaatctc atggttttgg
     1081 gaaaaaagag agttttcgaa aggttgtaat gcctcgtttg ttactttaat tcctaagaag
     1141 aatgatccca tcacgcttga cgactatagg cctaaaagtc taattggtag tttttacaaa
     1201 actgttgcca aaatcctttc caatcggtta cggaaggtaa ttcctagact tgttggttcg
     1261 aaacaaagta cgttctcaag ggagaggtat attcttgatg gcgtgtttgt ggcaaacgaa
     1321 actattgaat tcttgaaatc aaatagaaaa caagggctta tttttaaggt tgatttcgaa
     1381 aaggcgtgtt gtgtcaaaag tgtgttcagt agtacttaa
//
LOCUS       XM_071833053            1083 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842958), mRNA.
ACCESSION   XM_071833053
VERSION     XM_071833053.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1083
                     /gene="LOC139842958"
                     /note="uncharacterized LOC139842958; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins"
                     /db_xref="GeneID:139842958"
     CDS             1..1083
                     /gene="LOC139842958"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689154.1"
                     /db_xref="GeneID:139842958"
                     /translation="MEDTYKMLEFLDDDSDDEKIVSFINSLTEEEVDGEASSSRFSRS
                     RVYIARDREDAALRLYNDYFSEAPMYPENKFKRRYRMSRQLFLRIVEGISNFNSTNIP
                     EYFLFFGERPDATGRQSLTILQKCTAAIRQMAYGTTPDLFDEYIKIGEKTAALCLDYF
                     CKCVFRLFAREYLRKPIAEDIARLYNFHEQKHGLPGMLGSIDCMHWEWKNCPVGWQGQ
                     YTRGSNNDINVLNASPIFNSIKDGTAPPSPFDVNGRHYERGYYLGDGIYPDWAMLVKA
                     PHNPIDEPCEKFKRFQESARKDIERAFGVLLGRFAMLKTPTRSKDFNKIRRHMYACIV
                     LHNMIQENNGFAIGRREERMIERNPP"
     misc_feature    511..1032
                     /gene="LOC139842958"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggaagata cttacaagat gctcgagttt cttgatgatg attccgatga tgaaaaaatt
       61 gttagtttta ttaatagttt aacggaagaa gaagtcgatg gagaagcaag cagttcacga
      121 ttctctcgaa gccgggttta tattgctagg gatcgtgaag atgccgcttt aaggttatat
      181 aatgattatt tttcggaggc accaatgtat cccgaaaata aatttaagag acgttatcga
      241 atgagtcgtc agttatttct ccgaattgtg gaaggtatat ctaattttaa tagtaccaat
      301 attcctgaat attttttgtt ttttggggaa cgtcccgatg caacaggtcg tcaaagtttg
      361 acgattcttc aaaagtgtac agcggccata cgtcaaatgg cgtatggaac tacacccgat
      421 ttgtttgacg aatacataaa aataggtgag aaaacagccg ctttatgttt agattatttc
      481 tgcaaatgcg tatttcgttt gtttgctaga gaatatttgc gaaaacccat tgccgaagat
      541 atcgctagac tttataattt tcacgaacaa aaacatggtt taccgggtat gcttggtagt
      601 atagattgta tgcattggga gtggaagaat tgtcctgttg gttggcaagg gcaatacaca
      661 agaggttcga ataatgatat taacgttcta aatgcatcac caattttcaa ctctataaaa
      721 gatggaacgg ctccaccttc accatttgat gtcaacgggc gtcactacga aagaggatat
      781 tacctaggcg atggtatata cccagattgg gccatgttgg taaaagcccc tcataatcca
      841 attgacgaac catgtgaaaa atttaaacgt tttcaagaaa gtgcaaggaa agatattgag
      901 cgtgcatttg gagtattact gggtagattt gcaatgttaa agactccgac gagatctaaa
      961 gacttcaaca aaattagaag acatatgtat gcttgtattg tattacataa catgattcaa
     1021 gaaaataacg gttttgctat tggaaggaga gaagaaagaa tgatagaaag gaacccacca
     1081 tga
//
LOCUS       XM_071833054             156 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides small polypeptide DEVIL
            22-like (LOC139842959), mRNA.
ACCESSION   XM_071833054
VERSION     XM_071833054.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..156
                     /gene="LOC139842959"
                     /note="small polypeptide DEVIL 22-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:139842959"
     CDS             1..156
                     /gene="LOC139842959"
                     /codon_start=1
                     /product="small polypeptide DEVIL 22-like"
                     /protein_id="XP_071689155.1"
                     /db_xref="GeneID:139842959"
                     /translation="MAFELANGHSKRKGNSITRKCASLVKKQRARLYIVRRCATMLLC
                     WYIQGDE"
     misc_feature    76..132
                     /gene="LOC139842959"
                     /note="DVL family; Region: DVL; pfam08137"
                     /db_xref="CDD:462367"
ORIGIN      
        1 atggcatttg aacttgctaa tggccattca aagagaaagg gtaacagcat aacaagaaag
       61 tgcgcttctt tggtcaaaaa acagcgtgca cgtctttata ttgttcgtcg ttgtgctacc
      121 atgcttctat gctggtacat ccaaggggat gaatag
//
LOCUS       XM_071833055             678 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842961), mRNA.
ACCESSION   XM_071833055
VERSION     XM_071833055.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..678
                     /gene="LOC139842961"
                     /note="uncharacterized LOC139842961; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139842961"
     CDS             1..678
                     /gene="LOC139842961"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689156.1"
                     /db_xref="GeneID:139842961"
                     /translation="MENDVWNLKWSRDNVGGRNEQYIDDLKSLLQSVSITNEEDKVVW
                     GPSMHGNYTISGARRIVDENILPNLQQSTRWIKFIPIKVNIFIWRVTIDKLPTRYNLL
                     IRGVDIQDIGCPHCDCGVEDLNHVLFSCVLARDIWRKIGLWTNVMFVRFDSWTEWLSW
                     FDNWAAPANIKDRLNVIVATLVWVIWRFPNGVIFSATNMSRDELYDSIRSFSYSWLSS
                     RCKYQIN"
     misc_feature    <223..408
                     /gene="LOC139842961"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggaaaatg atgtttggaa tttgaaatgg tctagagaca atgtgggggg tcgaaatgaa
       61 caatatatag acgatttaaa atccttgttg cagtctgttt cgataacaaa tgaagaggat
      121 aaagttgttt ggggcccaag tatgcatggc aattatacta tttctggagc gagaagaata
      181 gttgatgaaa atattctccc aaatttgcaa caaagtacaa ggtggatcaa gttcattcct
      241 ataaaagtga atatttttat ttggcgagta acgattgata aacttcctac aaggtacaat
      301 cttcttattc gaggtgtcga tattcaagat atagggtgcc ctcattgtga ttgtggagtt
      361 gaagatttga atcatgtttt gttctcttgt gttcttgcaa gagatatatg gcgaaaaatt
      421 ggcttgtgga ccaatgtgat gtttgttcga tttgattcat ggaccgaatg gctaagttgg
      481 ttcgataatt gggccgcacc cgcaaatatt aaggatcgcc tgaatgttat tgtggctact
      541 ttggtttggg tgatatggag gtttcctaat ggagttatct tttcggcgac taatatgagt
      601 agagatgaat tatatgattc aattagaagc ttttcttatt catggttgtc aagtagatgt
      661 aaatatcaaa taaattag
//
LOCUS       XM_071833056            1708 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842962), mRNA.
ACCESSION   XM_071833056
VERSION     XM_071833056.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1708
                     /gene="LOC139842962"
                     /note="uncharacterized LOC139842962; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842962"
     CDS             806..1255
                     /gene="LOC139842962"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689157.1"
                     /db_xref="GeneID:139842962"
                     /translation="MPVIDLDHVIKVVGTSRPDIRHGLGPMYVDNVTHSVILEVNEDD
                     ITFVERLAHLKKKKKEELMTSREDGIKEERPPLILIGRNGRRYCDCGDHACDGFWKAW
                     YILKRKVPRDQFEGTDSQSRRNDAPTLGSYKLIDHDDELDHGEAIQN"
ORIGIN      
        1 attattcagc ccccatcacc tccaaaaagt tgatttcttc aaggatcaag aacatcttcg
       61 atttttgctt gtttgattgc gtgctagtga gataaaacga tcatctcctt atcctctaca
      121 catctatatc atttattgat tgatttggat ttggctacta catatgaccg ttaggcgtgg
      181 ttagaaatgt tggggtttcc gaccacatgt atctctcaat aaaatgctac gactagtgga
      241 gccctttttg gtgaggtcat caccgttgcc aagtccaccc ccactttaag ttcagtgggt
      301 tctttgtatg ccatagtaaa atattcaagt acgagacata ttcatgactc ggtcgaagtt
      361 gatttaaaag gcccgaagtt cgttaaattt agtgtttgga tttggaaatc ttggacacta
      421 acaagttgaa catgttctta tttgatggat ttgatcataa attgatggaa tcgacgaatc
      481 aactcgtggt gactaatggt gtgaggaccg aaagtttcga aattcgtcaa gatgctaatg
      541 ctgcggtgag gaagaataaa gttaacgaaa atcatctcca ttcaagaatc aaattcggtt
      601 catttaagtc agaaggatgt aagctcgtaa gattggatca acatgtgaaa cctaaagatc
      661 aaattttcgt tggttccgga tgtttattcg aggatacaag ttttggaaat atcacaagag
      721 atgttaatgt tggatttgaa aaccgaaaga gtattagtcc tgaagttttt gatgggtatt
      781 gcgcagataa gcccaacatg gctacatgcc agttattgat cttgatcatg tgattaaagt
      841 tgtgggtact tctaggccag atattaggca tgggctgggt ccaatgtatg ttgataatgt
      901 cacacattct gtaattttag aggtaaacga agacgatatc acgtttgtgg aaagattggc
      961 tcatttaaag aagaaaaaga aggaagaatt gatgacaagt cgtgaggatg gtataaagga
     1021 agaaagacct cctttgattt tgattggtcg taatggaagg aggtattgtg attgtgggga
     1081 ccatgcatgt gatggttttt ggaaagcatg gtacattttg aaaagaaaag ttcctagaga
     1141 ccaatttgaa ggcacagact cgcagtcgag aaggaacgac gctcctacat tgggttctta
     1201 taagctcatt gatcatgatg atgaactgga tcacggggaa gccattcaaa actagttttt
     1261 gggtggtaag gttgataaga agagcggagt agcggggttg ggtattaggg tttcttcggc
     1321 ttggggtaaa aataaaatga ccaacgaggc tttcgctgtt tttgatgtta tgatgacgtg
     1381 tatgaccgag agcaaatcag ttaaggttaa tcttatcaac tctagtgaga ttccacttgc
     1441 cctggttaat aataaaaacc aacaaaagcg aaagaagaaa ttggttctaa ggcgccggat
     1501 ggaagaattc ggtccataaa ggatatttaa gtctgttttt atcggtttca tgattcgtag
     1561 ctttcttttg atttcgttgt ttaatgcttt tgtttgtttg taattgtaaa tgtatatgga
     1621 tatcatcgga gtttctttct tgtatctctc gttgactttg ttttctgttc gaaaacgttt
     1681 ttcgttttat ataaaagcct ttgttatt
//
LOCUS       XM_071833058            1266 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842963), mRNA.
ACCESSION   XM_071833058
VERSION     XM_071833058.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1266
                     /gene="LOC139842963"
                     /note="uncharacterized LOC139842963; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842963"
     CDS             1..1266
                     /gene="LOC139842963"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689159.1"
                     /db_xref="GeneID:139842963"
                     /translation="MSGGIVSIWDASCFVKERIRCDSNFIIVKGPFVLIGDMNEVRNE
                     CDRMGSVFNRNEVDVFNSFITDSDLFEVPLCGRQFTWMNKPGSKMSYIDRALVSENVL
                     SIFPDLRLTSMERGWSDHTPMLLHNLKIDFGPTPFKFYHSWMQYDDLEGVVQSVFEVE
                     GSNGIPFPEKLRIAKGRIKSWIKEKKQTNMSRSKQIIIRLNDIELMIENGQATEEHLQ
                     ERLSLFQEMASVNKKEDMVTDPNGIKNAFFEFYKKKFEYEPNQSLISDLLPQNRLNED
                     DCSWLERNVSELEIKEAVWACDSDKAPGPDGFTFLFIKKIWDIIKVDLLRSVTAAFNE
                     RKLPFRSSSAFITLVPKVDNPTLIKDFRPISLIGVFYKIVAKLLAIRLAKFIDKIISM
                     EQSAFIAGRQILDGPLVLSELMEWYKLKH"
     misc_feature    <97..360
                     /gene="LOC139842963"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    1030..>1263
                     /gene="LOC139842963"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgtccggag gcattgtttc tatttgggat gcgtcgtgtt tcgttaaaga aaggattcgg
       61 tgtgattcta atttcattat tgtcaaagga ccttttgttc taattggtga tatgaatgaa
      121 gtgagaaacg aatgtgatcg tatgggttcg gtttttaata gaaatgaagt tgatgttttt
      181 aactctttta taacagattc tgatttattt gaggttcctt tgtgtggccg tcaattcact
      241 tggatgaata aacctggttc caaaatgagt tatatagata gggcattggt gtccgaaaat
      301 gtcttatcta tttttcctga tttgcgcttg acatcaatgg agagagggtg gtcggaccat
      361 actccaatgc ttcttcataa tttaaagatc gatttcgggc ctactccatt caaattctac
      421 cattcatgga tgcaatatga tgatcttgag ggggtagttc aatctgtttt tgaggttgaa
      481 ggttcgaatg gtatcccttt tccagagaag ttgagaattg ctaaaggtag gattaaatct
      541 tggataaagg agaaaaaaca aacaaatatg tctcgttcga aacagattat tattcgtttg
      601 aatgatatag agttgatgat tgaaaatggc caagcaacag aggaacattt gcaagaacga
      661 ttgtctttat ttcaagagat ggcctctgtt aacaagaaag aagatatggt tacagatcca
      721 aacggtataa agaatgcttt tttcgaattt tataaaaaaa aattcgaata tgaacctaac
      781 cagtctttaa ttagcgatct gcttccacaa aatagattaa acgaagatga ttgttcatgg
      841 cttgaaagga atgtttccga gttggagatt aaggaagcgg tatgggcttg cgatagtgac
      901 aaagcaccgg ggccagatgg ttttacgttt cttttcataa aaaaaatttg ggatataata
      961 aaggttgatt tattacgttc ggttactgct gcatttaacg aacgtaaact gccttttagg
     1021 tcgtcgtcag cctttattac cttggttcca aaagtggaca atccgacttt aatcaaagat
     1081 tttcggccta tttctctcat tggtgttttc tataaaattg tagcaaagtt acttgctatc
     1141 cggttggcta aatttattga taaaatcatt agcatggaac aatcggcatt tatcgcgggt
     1201 cgtcaaatcc ttgatggtcc tttagttctt agcgaattga tggaatggta caagttgaaa
     1261 cactaa
//
LOCUS       XM_071833059            2763 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate receptor 2.7-like
            (LOC139842964), mRNA.
ACCESSION   XM_071833059
VERSION     XM_071833059.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2763
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2763
                     /gene="LOC139842964"
                     /note="glutamate receptor 2.7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139842964"
     CDS             1..2763
                     /gene="LOC139842964"
                     /codon_start=1
                     /product="glutamate receptor 2.7-like"
                     /protein_id="XP_071689160.1"
                     /db_xref="GeneID:139842964"
                     /translation="MGCISTTSAKTEIKVGVILDMETSIGKMSSTCISMALHDFYQQH
                     ENYTTEIHLRFRDSKQDNIEAASAAIDLLKNDQVKAILGPMRSSQADFVNNIGNKSNV
                     PIISPATSPYLSTNDNVYFIRTAPDSSLQLEPITELIKHFNWREIVFVYEDGGYGRGL
                     FPYLSDTMMNIGTKVMYRCAICRSVSDDAILKELYKLKTMQTRVFVVHTLPDLAVRFF
                     KKVNEAGMMEEGYVWIITEVLTSRLHSLDRTDIDSMQGVLGVKSYIPRSNELINIEKR
                     WKREFMIQNPEDEFTELDMFGIWSYDSVFALAMALERIGLSETNTSFKRQTSTTDLGG
                     IGISEMGSTLVPWIRNSRFKGISGEFRILDGQLQWSVYEIVNIIGKKENAIGLWTSKK
                     GISKNLNDQTNSLKAVTWPRDSHVIPKGWEIPTSNDNKLRVGVPARKGFGMFIDANTN
                     PQTNQVIITGFCVDVFNAVIDALPYAVKHDFVAETYADLMHSLSDGTYDAVAGDITIR
                     ANRADHVEFTLPYTESGVSMIVAIKDERKSAWIFMRPLETELWITVGAFFIYIGLVVW
                     ILEHQVNKEFRGPPHEQVGMIFWFSFSTLVFAHREKVMSNLSIFVVIVWVFVVLVLTS
                     SYTASLTSMLTVQQLRPTYTDIKVIMRNGESVGYQDGSFVKEMLINMGFDDSKVKNYS
                     TFEQYDEALQKGSKNGGVSAIMDELPYNRVFLAKYCTNYTMTGPIYKSAGFGFAFPKG
                     SPLVHDVSTAVLKVTENQMTNLSKKWFGDSDSCDQQNEATVTSDKLTLDSFKGLFLIA
                     GLSSTSALVIFFLKFLYQNRLMLSSQDSVTQKLVAIAKSFDGFKDDESKRVSPDAALD
                     EFVSADNINNSPAISIIHQDEGFFSPDEGLLTTEPGTPVHDSIELLETTVEPGMPASH
                     HLSCRN"
     misc_feature    40..1194
                     /gene="LOC139842964"
                     /note="periplasmic ligand-binding domain of Arabidopsis
                     thaliana glutamate receptors and its close homologs in
                     other plants; Region: PBP1_GABAb_receptor_plant; cd19990"
                     /db_xref="CDD:380645"
     misc_feature    order(82..84,319..324,886..888)
                     /gene="LOC139842964"
                     /note="putative ligand binding site [chemical binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    order(187..189,196..198,283..285,538..540)
                     /gene="LOC139842964"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    1285..2301
                     /gene="LOC139842964"
                     /note="Plant glutamate receptor domain; the type 2
                     periplasmic binding protein fold; Region: GluR_Plant;
                     cd13686"
                     /db_xref="CDD:270404"
     misc_feature    1639..2400
                     /gene="LOC139842964"
                     /note="Ligand-gated ion channel; Region: Lig_chan;
                     pfam00060"
                     /db_xref="CDD:459656"
ORIGIN      
        1 atgggctgca taagtactac atcagcaaaa acagagataa aagtaggtgt gattcttgat
       61 atggaaacaa gcattggtaa gatgagcagt acttgtattt caatggcgtt acacgatttc
      121 tatcagcaac acgaaaacta tacaactgaa attcatcttc gctttcgtga ttctaaacaa
      181 gacaacattg aagcggcctc tgcagccatc gatctcttga aaaacgatca agtcaaggcg
      241 attttaggac ccatgagatc ttcacaagca gattttgtga ataacattgg taacaaatca
      301 aacgttccta ttatatcacc tgcaacgagc ccttatcttt cgactaatga taacgtttac
      361 ttcattcgta ctgcacctga ttcgtccttg caactcgaac ctataacaga attgatcaaa
      421 cactttaatt ggagagaaat agtgtttgtt tatgaagatg gtggatatgg gagaggactt
      481 tttccttatt tatcggatac catgatgaat atcggtacca aagttatgta tcggtgtgct
      541 atttgtcgtt ctgtttcaga tgatgcgatc cttaaagagc tctacaagtt aaaaacaatg
      601 cagactcggg tttttgtggt acacacgtta ccagatttgg cagtgcgatt tttcaagaaa
      661 gtaaatgaag caggaatgat ggaagaaggt tatgtttgga tcataactga agtgctcacg
      721 agtcgtttac attcgttgga ccgtacggat atagattcga tgcaaggagt attaggtgtg
      781 aagtcttaca tccccaggtc taacgagcta ataaacatcg agaaaagatg gaaacgagaa
      841 tttatgatac aaaatcctga agatgagttt acagaactag acatgtttgg gatatggtct
      901 tatgatagtg tttttgcact ggctatggcg ttggagagaa tcggattaag tgaaacgaat
      961 actagtttca aaagacagac ttcaacgacc gatttgggtg gtattggaat atctgaaatg
     1021 gggtcaacgc ttgttccatg gatccgaaat tcaagattta aagggataag tggcgaattc
     1081 cgtatacttg atggacagtt acaatggtca gtgtacgaaa tcgtgaacat aattggaaag
     1141 aaggagaatg ctatcgggtt gtggacttct aaaaagggca tctcgaagaa cttaaatgat
     1201 caaacgaata gccttaaggc cgttacatgg ccccgtgaca gtcatgtcat accgaaaggt
     1261 tgggagattc caacgagcaa cgataacaag ttaagagtcg gcgtacctgc aagaaagggg
     1321 tttggtatgt ttattgatgc taataccaac cctcaaacaa accaagtaat cattactggg
     1381 ttttgtgtcg acgttttcaa cgcagttatt gatgcattgc cgtatgctgt caaacatgat
     1441 ttcgtagcag aaacctatgc cgatcttatg cacagtctct ctgatgggac gtatgatgct
     1501 gtggctggag atattacaat acgcgcaaac cgtgcggatc atgttgagtt tacattaccg
     1561 tacacagaat cgggcgtgtc gatgattgtt gcgatcaagg atgagaggaa gagcgcatgg
     1621 atctttatga gaccactaga gacagagctt tggataacag tcggagcgtt ttttatctac
     1681 ataggactcg tggtatggat tctagaacat caagtaaaca aagagtttcg tgggccacct
     1741 catgaacaag tcggaatgat cttctggttt tccttctcta cgcttgtgtt tgcccatcgg
     1801 gagaaggtga tgagtaactt atcgatattt gtggtaattg tgtgggtgtt tgtggtgctc
     1861 gtgctcactt cgagctacac agcgagcttg acatctatgt taacagtaca acagcttagg
     1921 ccgacgtaca ctgatattaa ggtgatcatg agaaacggtg aatcggtagg ataccaagat
     1981 ggttctttcg ttaaagaaat gttgataaat atgggttttg atgatagcaa ggtaaaaaac
     2041 tacagcacgt ttgagcagta cgacgaagcc ctccaaaaag gaagtaaaaa tggaggtgtt
     2101 tctgcaatca tggatgaact tccctataat agagttttct tggctaaata ttgtaccaat
     2161 tataccatga ctggccccat ttacaaatct gcaggctttg gttttgcatt tcctaaaggg
     2221 tctccactag tgcatgatgt ttcaacagcg gtcctgaaag taacagaaaa tcaaatgacg
     2281 aacctttcaa aaaagtggtt cggagattca gacagttgcg atcagcagaa cgaagctact
     2341 gtcacatcgg acaagctcac actcgatagt ttcaagggcc tgtttctcat tgctggctta
     2401 tcatcaactt cggcactcgt gattttcttc ctaaagtttc tgtatcaaaa tagactaatg
     2461 ttatcttcac aagattcagt tactcagaaa ctagttgcaa ttgcaaaatc atttgacggg
     2521 tttaaggacg atgaatccaa aagggtcagc ccagacgcag cattagatga atttgttagt
     2581 gcggacaata ttaataatag tcctgcaatc agcataattc atcaagatga aggctttttc
     2641 tctccggatg aaggcttgtt aactactgaa ccggggacac cagttcatga ctctattgaa
     2701 cttttagaaa ctactgttga accggggatg ccagctagtc accatttaag ttgtagaaac
     2761 tag
//
LOCUS       XM_071833060            2380 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides glutamate receptor 2.7-like
            (LOC139842965), mRNA.
ACCESSION   XM_071833060
VERSION     XM_071833060.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2380
                     /gene="LOC139842965"
                     /note="glutamate receptor 2.7-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842965"
     CDS             1..2295
                     /gene="LOC139842965"
                     /codon_start=1
                     /product="glutamate receptor 2.7-like"
                     /protein_id="XP_071689161.1"
                     /db_xref="GeneID:139842965"
                     /translation="MNIQAFPKGSPLVHDVSTAVLKVTENQMTKLLKKWFGDSDSCDQ
                     HNEAAVTSDRLTLDSFKGPFLIAGISSTSALILFFLKFLYQNRLMLSSQDSVTQKLVA
                     IAKSFDGFKDDESKRVSPDATVDEFVSADSINNSPAISIFHQHEGILTTEPGTQVRDS
                     IELVETTVEPGTPVKLSKSVKLSKSVVIYTEVLFYIVIAKTDIKIGVILDMETSTGKM
                     RETCISMAISEFYQQHENFTTVIQPHFRDSKQDDVQAASAAIDLLKNVQVMGILGPMT
                     SSQADFVIDVGNKSNVPVISTATSPSLSTKDNVYFIRSVHNSSSQLKPIAELIKHFNW
                     NEIVFVYEDGEYGRGLDPYLSDAMIKIDVKIMYRFFMHPLVSDDWILAELYKLKTMQT
                     RVFVVHALPELASRFFEKVNEAGMMDEGYVWIITEVLTSRLHSLDRADIDLMHGVLGV
                     QSYIPRSNKLISFEIRWKREFQKRYPEDEMAELDMFGIWAYDTIFGLAMALEKIGNET
                     DNVRHFKRENESVTDLDAIGKLEMGSRLVPWIRNFRLEGLSGDFNIVDGELQSSVYQI
                     VNIIGKGENVISFWTPKIGISKKLNNQTQGIRAITWPGDSHVVPKGWDIPTSNENLLR
                     VGVPAKGGFVQFVDANTDPETKRVVVTGFCVDVFNAVIDVLPYAVKHEFVPFVTPDGK
                     RLAGSYNDLIGNLSVGKYDAVAGDVTILAKRTDFVDFTLPYTEAGISLIVPIKDERTN
                     AWIFTKPLERDLWITSECFSYTQA"
     misc_feature    <7..207
                     /gene="LOC139842965"
                     /note="Ligand-gated ion channel; Region: Lig_chan;
                     pfam00060"
                     /db_xref="CDD:459656"
     misc_feature    <13..108
                     /gene="LOC139842965"
                     /note="Type 2 periplasmic binding fold superfamily;
                     Region: Periplasmic_Binding_Protein_Type_2; cl21456"
                     /db_xref="CDD:473866"
     misc_feature    610..1770
                     /gene="LOC139842965"
                     /note="periplasmic ligand-binding domain of Arabidopsis
                     thaliana glutamate receptors and its close homologs in
                     other plants; Region: PBP1_GABAb_receptor_plant; cd19990"
                     /db_xref="CDD:380645"
     misc_feature    order(652..654,889..894,1456..1458)
                     /gene="LOC139842965"
                     /note="putative ligand binding site [chemical binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    order(757..759,766..768,853..855,1108..1110)
                     /gene="LOC139842965"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:380645"
     misc_feature    1867..>2208
                     /gene="LOC139842965"
                     /note="Type 2 periplasmic binding fold superfamily;
                     Region: Periplasmic_Binding_Protein_Type_2; cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 atgaatatac aggcatttcc taaagggtct ccactagttc acgatgtttc aacagcggtc
       61 ctgaaagtaa cagaaaatca aatgacaaaa cttttaaaaa agtggttcgg agattcagac
      121 agttgcgatc agcacaacga agccgcagtc acatcggaca ggctcacact cgatagcttc
      181 aagggcccgt ttctcattgc tggcatatca tcaacttctg cactcattct tttcttccta
      241 aagtttctgt atcaaaatag actaatgtta tcttcacaag attcagttac tcaaaaacta
      301 gttgcaattg caaaatcgtt tgacgggttt aaggacgatg aatccaaaag ggtcagccca
      361 gacgcaacag tagatgaatt tgttagtgcg gacagtatta ataatagtcc tgcaattagc
      421 atatttcatc aacatgaagg cattttgact actgaaccgg ggacacaagt tcgtgactcg
      481 attgaacttg tagaaactac tgttgaaccg ggtacaccag ttaaattatc taaatcggtt
      541 aaattatcta aatcggtggt gatttatacc gaagtacttt tttatattgt tattgccaaa
      601 acagatataa aaataggtgt cattttggat atggaaacaa gtactggaaa gatgagagaa
      661 acttgcattt caatggcgat aagcgaattc tatcagcaac acgaaaactt tacgaccgtg
      721 attcagcccc attttcgtga ttctaaacag gacgatgttc aagccgcttc tgcagccatc
      781 gacctgttga aaaacgttca agtcatgggt attttaggac ccatgacatc atcacaggct
      841 gattttgtaa tcgacgttgg caataaatca aatgttcctg ttatttcgac tgcaacgagc
      901 ccttctctgt caacgaaaga taatgtttac ttcattcgat cagttcataa ttcgtcatct
      961 cagctgaagc ccatagcaga actgatcaaa cactttaatt ggaacgaaat agtgtttgtt
     1021 tatgaagatg gtgaatacgg aagaggcctt gatccttatt tatcggatgc tatgataaaa
     1081 attgatgtaa aaatcatgta tcgattcttt atgcatcctt tggtttcgga cgattggatc
     1141 cttgcagagc tttacaaact aaagacaatg caaactcggg tgtttgtggt acacgcgtta
     1201 ccagaattgg cttcacgatt tttcgaaaaa gtgaacgaag caggaatgat ggacgaaggg
     1261 tatgtttgga tcataactga agtgctgacg agccgtttac attcgttgga tcgtgcagat
     1321 atagatttga tgcatggagt acttggtgtg cagtcttata ttccaaggtc taacaagctt
     1381 atcagcttcg aaataagatg gaaacgcgaa ttccagaaaa ggtatccaga agatgaaatg
     1441 gcagaactag acatgttcgg gatatgggcg tacgatacaa tatttggtct agcaatggca
     1501 ttggaaaaaa tcgggaatga aactgataac gttcgtcatt tcaaacgaga gaacgaatca
     1561 gttacagatc tggatgcgat tggcaaattg gaaatgggat cgagactcgt tccatggatc
     1621 agaaactttc gactcgaagg cttaagtggc gactttaata tcgttgatgg agaactacaa
     1681 tcatcggttt atcagatagt gaacatcatc ggaaaggggg agaatgttat cagtttttgg
     1741 acgcctaaaa ttggaatctc gaagaagcta aacaatcaga cacaaggtat tcgggcgatc
     1801 acatggcccg gtgactcaca tgtcgtcccg aaaggttggg atattccgac tagtaacgaa
     1861 aacttgttac gagttggtgt tcctgcaaaa ggcgggtttg ttcagtttgt cgatgcaaac
     1921 actgaccccg aaaccaaacg agttgttgtt actggtttct gtgttgacgt ttttaacgca
     1981 gtcattgatg tgttaccgta cgctgttaaa cacgaattcg taccttttgt tactccagat
     2041 gggaaaagac ttgcaggaag ctataatgat cttatcggca atctctctgt tgggaaatac
     2101 gatgcggtgg ctggtgacgt tacgatcctt gcaaaacgta cggattttgt cgatttcacg
     2161 ttgccataca cagaagctgg tatctcgttg attgttccaa tcaaagatga aagaacgaat
     2221 gcttggatct tcacgaaacc cttagaaagg gatctttgga taacatcgga gtgtttttcg
     2281 tatacacagg catagtcata tggattctcg agcatcgtat aaataaagaa ttcagaggcc
     2341 ccccgggtga acaagtcgga atgatctttt ggttttcatt
//
LOCUS       XM_071833061            2622 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842966), mRNA.
ACCESSION   XM_071833061
VERSION     XM_071833061.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2622
                     /gene="LOC139842966"
                     /note="uncharacterized LOC139842966; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139842966"
     CDS             1..2466
                     /gene="LOC139842966"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689162.1"
                     /db_xref="GeneID:139842966"
                     /translation="MAHYIPKNYDVQTAPIRRRLFKGFKDSQNVLISDVEKMLLKSDH
                     SRISDDDVVRLAIILIVERGFMGKQWIHVVNKKFLWLVEELSRVNQYPWGSRIWEPTY
                     EAVSEGFVIRESQLESGKAYTLAGFMWAFKIWILESYRRTIKPFAKKTDKNGVPRTLF
                     WKCSSAESFGMSEYLKLLDIQVLESAQGMPYVLACVFLSGRKVILASLRVDARGGACV
                     LACGRKAYRDASFSLRLCDECPKKKRPLRGLQPIETEKSCQWWIQSDVYFRGGKVPED
                     EIEDEVQEDEVDPVDPVVDGSQHTPRVHSTEYVHTEGPHDVHNLHRMLELLTKRMDKQ
                     EKELIDCKQLVMQHEKLLSQQQQKYQDDDTSFNRSLSDNEIERPSPMHIRRGIRERKP
                     TGVLRSPFTTPGYRKPIEKLSKDLVEKVESMNVVRLGTEEDQGQQQINQDVVPLDTDA
                     AAEVSVDKQPVKVNKRKRKEQDWATEEEIWGMIDRFINDQGTLQPLPPNTWRDGRKHA
                     DPAKDPKTMIESKQETRCMFIFQNEQFIFINQDFWLRLLGLRHSGYLDNLATFLLRYR
                     QRFLPRASQFYATPQFPAEVLKASSRWTIMPLGFLNMFERFNTYFDNTQKEVGTQEES
                     TTDGEGIIGHNPPDYMYLIGFGDGSVDLYPSWADCDQVLIPVHFYDEEHFLLLQLKLE
                     EMKVFVYDSLPGCVSSQKLDAVFKILGDNLPVYLKAIDYFNKMQDSQIVGYYENKESV
                     ELMIEHGPIVPMQTGGQGDCGVWVCIHMERIIYGREEVDNLGDPKKAAEQYRNRMART
                     FFRARFDTQEPPPPTPPSEIQVD"
     misc_feature    <70..282
                     /gene="LOC139842966"
                     /note="Plant mobile domain; Region: PMD; cl46345"
                     /db_xref="CDD:480685"
ORIGIN      
        1 atggcgcatt acatcccgaa gaattatgac gtccagaccg cacctattag acgacgttta
       61 tttaagggtt ttaaagattc tcaaaatgtt ttgattagtg atgttgaaaa gatgctttta
      121 aaatctgatc acagccgtat tagtgacgat gatgtggtgc gattagcaat tatcttgatt
      181 gtagagagag gttttatggg taaacaatgg atccatgttg tgaataaaaa gtttttatgg
      241 ctagtcgaag agttatcgcg tgttaatcag tacccttggg ggtctcgtat ttgggagcca
      301 acttacgaag cggttagtga agggtttgtt attcgtgaaa gccaattaga gagtggaaag
      361 gcgtacactt tggcgggatt tatgtgggca ttcaagattt ggattctcga gtcttaccgt
      421 cgtaccatta aaccgtttgc aaaaaagact gacaagaatg gagtaccgag gactcttttt
      481 tggaagtgtt catctgccga gtcatttgga atgtctgaat accttaaact cctagatatt
      541 caggttctgg aatcggcgca aggcatgcct tacgtccttg cgtgtgtttt tttaagtgga
      601 cgcaaggtga ttcttgcgtc attgcgcgtg gacgcaagag gtggagcttg cgtccttgcg
      661 tgtggtcgca aggcgtacag agacgcaagc ttttctttgc gtctttgcga tgagtgtccc
      721 aagaaaaaga gacctttacg tggtctgcag ccaattgaaa cagaaaagag ttgtcaatgg
      781 tggattcaga gtgatgtgta ctttcgagga ggaaaggtac cagaagatga gattgaggat
      841 gaggtgcaag aagatgaagt tgatccagtt gatccagttg ttgatgggtc ccagcacaca
      901 ccccgtgtgc attcaacaga atatgttcat acagagggcc ctcacgatgt acacaattta
      961 catcgtatgt tagagttgtt gacaaagcgg atggacaaac aagagaaaga gttaattgat
     1021 tgcaaacaac ttgttatgca acacgaaaaa cttttatcgc aacaacaaca aaaatatcag
     1081 gatgatgata cgtctttcaa tcgatctttg tctgataatg agattgaaag gccttctcca
     1141 atgcacattc gacgtggaat cagagaaaga aagccaactg gtgtattaag gtccccattc
     1201 acaacacctg ggtacagaaa acccattgag aagttgtcaa aagatttggt tgagaaagtg
     1261 gaaagcatga atgttgtacg gttagggact gaagaagatc aaggacaaca acaaattaat
     1321 caggatgtgg tacccctgga cacagatgca gcagcagagg taagtgttga taagcagcct
     1381 gttaaagtga ataagagaaa aagaaaggaa caagactggg ctactgagga agaaatttgg
     1441 gggatgattg acaggtttat aaatgatcaa ggaactctcc aaccactgcc acctaatacc
     1501 tggagagatg gtagaaagca tgcagaccca gcaaaagatc caaagacaat gattgagagc
     1561 aagcaagaga cgcgttgcat gttcatcttt caaaatgaac aattcatttt tataaatcaa
     1621 gacttttggc ttcgattact gggattaaga cattctggtt atttggataa cttggctaca
     1681 tttcttttga gatatcgtca gagatttctc ccccgagcca gtcaatttta tgccactcct
     1741 cagtttccag ctgaggtact taaagcaagt tctcgatgga ctattatgcc actgggattc
     1801 ctgaacatgt ttgagaggtt caacacttat tttgacaata ctcagaagga ggtgggcaca
     1861 caggaagaat ctacaacaga tggagaggga attattggcc ataatcctcc agattacatg
     1921 tacttaattg gatttggaga tggcagtgtt gacctatatc catcttgggc tgactgtgat
     1981 caggtcttga tcccagtaca tttttatgac gaagaacatt tcctgctgct tcagttgaag
     2041 ttagaagaaa tgaaggtttt tgtgtacgac agtttacccg gatgtgtcag ttcacaaaaa
     2101 cttgacgcag ttttcaagat tttgggtgac aacttgccag tgtacttgaa ggcgattgac
     2161 tattttaaca agatgcaaga ctcccaaatt gtcggatact atgaaaataa agagagtgtg
     2221 gagttgatga ttgagcatgg tcccattgtg ccaatgcaga ctggtggtca gggtgattgt
     2281 ggggtttggg tgtgcataca catggagagg attatttatg gaagggagga ggttgacaac
     2341 cttggagatc ctaaaaaggc tgcagagcag tatagaaaca gaatggcaag gacgttcttc
     2401 cgtgcccgtt ttgatacaca agaaccgccg ccaccaactc caccatcaga gattcaggtt
     2461 gattgataca ttgtagctag taggttgctg gcctgtatgt aaattttgtg taaataggca
     2521 aattgtattt gcaacagttt tatttgactt tacacgcaag gacgcaaggc tatgcttgcg
     2581 tacgcaagca tagctttgcg tccttgcgtg tgtatatttt tg
//
LOCUS       XM_071833062            2055 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides RNA-binding KH
            domain-containing protein RCF3 (LOC139842967), mRNA.
ACCESSION   XM_071833062
VERSION     XM_071833062.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2055
                     /gene="LOC139842967"
                     /note="RNA-binding KH domain-containing protein RCF3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139842967"
     CDS             38..2029
                     /gene="LOC139842967"
                     /codon_start=1
                     /product="RNA-binding KH domain-containing protein RCF3"
                     /protein_id="XP_071689163.1"
                     /db_xref="GeneID:139842967"
                     /translation="MDTSYPNKRLFDHSAVDRLDPHLTPSSSVRRRQHHHYNHPPPSS
                     PATPQSHLNNPFRTPLKLSAGETLFRILCPASKTGGLIGKGGAIIRQVREETGAKIRI
                     DESTPGAEDRVIYIAASDSNPNPKNKETNSSNSSVNNNSSCVTNDGDSKNNDGGECDG
                     KESGSGDGEETIAQKALVRVFERIVKVDEERNKTSKDENGDENVAEGGGGVPQGPVLC
                     RLLVAGNQIGSVLGRGGKIIEKIRQESGAQVRVLPKDQIPDCASAGDEMIQMAGKYLS
                     VRKALVSVSNCLQEAGNNRPMGTAPHGHGYGPDHHHRTGMEEEVVFRLLCHVDKVGSL
                     IGKGGSIRRAMQTETGASIKISDSPAEPDERVVVISSLETLDQRHSPAQDAVMRVNGR
                     MAEIGFEPGAPVVSRLLVHSRQIGCLWGKGGSIVAEMRRVTGANIQIFPSEQVAKYGM
                     PNDEVVQVIGSLPCVQDAMFRITGRLRETVFPVRSYHPSGYMGPYPDMPPPSFRPRHD
                     PASPVGHFEPPPFLHGVDHHRPPYSYPYGNERPGYGPITPPGRHTSQSGSNRYHGEFP
                     EYEGGLSKANDPAGRNEASGTGHSTVEITIPPNLLGYLYGENKSNIGHIRQISGANVM
                     VQEESSRVVLSGTADEIHSAQCLVHGFILCEQHLTQAGA"
     misc_feature    233..>397
                     /gene="LOC139842967"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in Arabidopsis thaliana RNA-binding KH
                     domain-containing protein PEPPER and similar proteins;
                     Region: KH-I_PEPPER_rpt1_like; cd22459"
                     /db_xref="CDD:411887"
     misc_feature    order(263..265,269..277,281..295,302..307,314..319,
                     332..343)
                     /gene="LOC139842967"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:411887"
     misc_feature    686..904
                     /gene="LOC139842967"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in Arabidopsis thaliana RNA-binding KH
                     domain-containing protein PEPPER and similar proteins;
                     Region: KH-I_PEPPER_rpt2_like; cd22460"
                     /db_xref="CDD:411888"
     misc_feature    order(710..712,716..724,728..742,749..754,761..766,
                     779..790)
                     /gene="LOC139842967"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:411888"
     misc_feature    992..1198
                     /gene="LOC139842967"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in Arabidopsis thaliana RNA-binding KH
                     domain-containing protein PEPPER and similar proteins;
                     Region: KH-I_PEPPER_rpt1_like; cd22459"
                     /db_xref="CDD:411887"
     misc_feature    order(1022..1024,1028..1036,1040..1054,1061..1066,
                     1073..1078,1091..1102)
                     /gene="LOC139842967"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:411887"
     misc_feature    1250..1468
                     /gene="LOC139842967"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in Arabidopsis thaliana RNA-binding KH
                     domain-containing protein PEPPER and similar proteins;
                     Region: KH-I_PEPPER_rpt2_like; cd22460"
                     /db_xref="CDD:411888"
     misc_feature    order(1274..1276,1280..1288,1292..1306,1313..1318,
                     1325..1330,1343..1354)
                     /gene="LOC139842967"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:411888"
     misc_feature    <1523..1687
                     /gene="LOC139842967"
                     /note="G-box binding protein MFMR; Region: MFMR;
                     pfam07777"
                     /db_xref="CDD:400228"
     misc_feature    1811..1993
                     /gene="LOC139842967"
                     /note="K homology (KH) RNA-binding domain, type I; Region:
                     KH-I; cl00098"
                     /db_xref="CDD:469614"
ORIGIN      
        1 aaacgcatac aattgcacag ccattttcag tacaccaatg gatacttcat atccaaacaa
       61 gcgtctattt gaccactccg ccgttgatcg gttagaccct caccttactc cgtcatcttc
      121 cgtcagacgc cgtcaacacc accattacaa ccatccgccg ccatcttctc ccgccacacc
      181 tcaatctcat ctcaacaatc cgttccgtac acctctaaaa ctctccgccg gcgaaacgtt
      241 atttcgtata ttatgtccgg cgtcaaaaac cggcgggtta atcggtaagg gtggcgctat
      301 cattcgccag gtccgtgaag aaaccggcgc caaaattcga attgatgaat ctacccctgg
      361 cgctgaggac cgtgtgattt atatagcagc ttctgattca aaccctaacc ctaagaataa
      421 ggagactaat tcttctaata gtagtgttaa taataatagt agttgtgtta ctaatgatgg
      481 tgatagtaaa aataatgatg gtggtgaatg tgatggtaag gaatcaggga gtggtgatgg
      541 tgaagaaacg attgcgcaaa aggcgcttgt tagggttttc gagaggatag tgaaagtgga
      601 tgaagaaaga aataaaactt caaaggatga gaatggtgac gaaaatgttg cagaaggagg
      661 tggcggggtg cctcaaggac cggtattgtg taggttgttg gtggctggta atcaaattgg
      721 aagtgtttta ggaagaggag gaaagattat tgaaaagatt aggcaggaga gtggtgctca
      781 agttagggtt ttgcctaagg atcagattcc ggattgtgct tccgccgggg atgagatgat
      841 tcagatggca ggaaagtatt tatctgtaag gaaagctcta gtatctgtat cgaactgtct
      901 tcaggaagca ggcaataaca ggcccatggg aacggcacct catggtcatg gatacggtcc
      961 tgaccaccac cataggacgg gtatggaaga agaagttgta tttagattat tgtgtcatgt
     1021 tgacaaagtt gggagtttga ttggtaaagg aggttccatc agacgtgcaa tgcagactga
     1081 aactggtgct tctattaaaa taagcgattc accagctgaa ccagatgagc gggtggttgt
     1141 aatatcttca ttagagactt tagatcagag acattctcct gcacaggatg ctgttatgcg
     1201 ggtcaatggt agaatggctg agattgggtt cgaacccggt gcacccgttg tttctaggct
     1261 tttggtgcac tcgcgtcaaa ttgggtgttt gtggggtaaa ggcggctcga ttgttgctga
     1321 gatgagaaga gttactggtg ctaacataca aatatttcct agcgaacagg ttgcaaagta
     1381 tggtatgccc aacgatgaag ttgtgcaggt aattggcagc ttaccgtgtg ttcaagatgc
     1441 tatgtttcgg atcacaggca gactgcgtga gaccgtattt cctgtgcgat cgtatcatcc
     1501 aagtggttat atgggccctt atccagatat gccaccacct tcattcaggc caagacatga
     1561 tcctgcatca cctgttgggc attttgaacc tccacctttt ttgcatggtg tggatcatca
     1621 tcgtccacct tattcgtatc cttatggcaa tgaacggcca ggatatggtc ccataacccc
     1681 accgggaagg cacacttctc agtcaggtag caataggtat catggtgaat tccctgagta
     1741 tgaaggtggc ttatcaaaag ctaatgatcc agctggaagg aatgaagcat caggtacagg
     1801 acattcaact gttgagatca cgattcctcc taatttatta gggtacctat atggggaaaa
     1861 caagagcaac ataggtcata taagacaaat atcaggtgca aatgttatgg tacaagagga
     1921 aagctcgcga gtagtattgt ctggcacagc tgatgaaatt catagcgccc agtgcctagt
     1981 tcatggtttc attctttgtg agcagcacct cacccaagct ggtgcgtgag gagagtacat
     2041 gttcagggtc gtcca
//
LOCUS       XM_071833063             735 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842968), mRNA.
ACCESSION   XM_071833063
VERSION     XM_071833063.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..735
                     /gene="LOC139842968"
                     /note="uncharacterized LOC139842968; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842968"
     CDS             1..735
                     /gene="LOC139842968"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689164.1"
                     /db_xref="GeneID:139842968"
                     /translation="MDKAFKMFNFLIDDSDDEKIVTFVNSLWEEEEEEVEGEASSSRV
                     PRPRTYIARDREAAAERLYNDYFAESPIYPEKKFKRRFRMSHQLLLCIIEGISSYNSH
                     NIPDYFLYFRERPDCTGRQSLTIYQKCTAAIRQMAYGTTPDMFDEYIKIGEKTAAQCL
                     ENFCQCVFHLFAREYLRKPTADDIARLYNFHSQKHGLLGMLGSIDCMHWEWKNCPVAW
                     QGQYTRGDQKGPSVMLEAVASQDLWI"
     misc_feature    520..>732
                     /gene="LOC139842968"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataagg ccttcaaaat gtttaacttt ttaatcgatg attcggatga tgaaaaaatt
       61 gttacgttcg ttaacagttt atgggaagaa gaggaagagg aagtagaagg agaggcgagt
      121 agttcacgag tccctcgtcc ccgcacttat attgcacgag accgtgaagc tgctgccgag
      181 aggttataca atgattattt tgcggaatca ccgatttatc ctgaaaaaaa gttcaagcga
      241 cggtttcgaa tgagtcatca attgttgctc tgtatcatcg aaggtatatc tagctataat
      301 agtcataata tacccgatta ttttttgtac tttagggagc gtcccgattg tactggacgt
      361 caaagtttga caatatacca aaagtgtacg gcggccatac gccaaatggc gtatggaacc
      421 acacctgata tgtttgacga atatataaaa attggtgaga aaactgctgc ccaatgtcta
      481 gaaaactttt gtcaatgcgt atttcatttg tttgcaagag agtatttgcg taaaccaacc
      541 gccgatgata ttgctcggct ttataatttt cattcacaaa aacatggttt actgggtatg
      601 cttggtagta ttgattgtat gcattgggag tggaaaaatt gccctgttgc gtggcaaggg
      661 caatatactc gaggtgatca aaaaggcccg tctgttatgc tcgaggcagt agcctctcaa
      721 gatttgtgga tatga
//
LOCUS       XM_071833064             534 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842969), mRNA.
ACCESSION   XM_071833064
VERSION     XM_071833064.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..534
                     /gene="LOC139842969"
                     /note="uncharacterized LOC139842969; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139842969"
     CDS             1..534
                     /gene="LOC139842969"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689165.1"
                     /db_xref="GeneID:139842969"
                     /translation="MSPLFNTIKDGTAPPSPFEVNGHHYKRGYYLGDGIYPDWAMLVK
                     APHNPIDEPRKKFKRFQESARKDIERAFGVLHGRFEMLKTPARTLDFNKIRRHMYACI
                     VLHNMIQENNGFVITRREERMIARNPPRRLIRNLRDRNAIVKEIQDRQVHNMLEADIT
                     EHVWNLSPFFRSANNVE"
     misc_feature    <4..339
                     /gene="LOC139842969"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgtcgccat tattcaacac cataaaagat ggcactgctc caccttcacc atttgaagta
       61 aacgggcatc actataaaag agggtattac ttaggtgatg gtatataccc ggattgggct
      121 atgttggtaa aagctcccca caacccaatt gacgaaccac gcaaaaaatt taaaagattt
      181 caagaaagtg caaggaaaga tattgagcgt gcatttgggg tacttcatgg aagatttgaa
      241 atgttaaaaa ctccggctcg aactttagac ttcaacaaaa ttagaagaca catgtacgct
      301 tgtattgtct tacataacat gattcaagaa aacaatggtt ttgtgataac tcgccgagag
      361 gaaagaatga ttgcaaggaa tccgccacga cgattaatca ggaatttgag ggatcgaaat
      421 gctattgtta aggaaataca agatcgtcaa gtacacaata tgttggaggc cgatataacc
      481 gaacatgttt ggaacttgtc accgtttttt cgttccgcta ataatgtcga gtag
//
LOCUS       XM_071833065             972 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842970), mRNA.
ACCESSION   XM_071833065
VERSION     XM_071833065.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..972
                     /gene="LOC139842970"
                     /note="uncharacterized LOC139842970; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842970"
     CDS             1..972
                     /gene="LOC139842970"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689166.1"
                     /db_xref="GeneID:139842970"
                     /translation="MVLSIRNTTTNRALEAIDALDELSDNEEVEQIPRAPRRYLHRDR
                     QGRALALWNDYFSDNPTFSDDYFRNRYRMSKPLFLRICQGILNFSQTPVPKYFSYFIQ
                     KRDATGLLGFNIVQKVTSAIRQLAYAASADVFDEYLHMGEQTSYDCLNNFCKCIFHLY
                     DPEYLRRLTAQDVQRLTTKHAQIHGFSGMLGSIDCMHWRWRNCPARWKGHYTRGDHGY
                     QSIMLEAVASYDGWFWHAFFGTAGSNNDINVINQSDLFSELLAGEAPPCTYTVNGCTF
                     TKGYYLADGIYPEWSTIVKSFKNPIDPKQKKFKRYQESARKDIERAF"
     misc_feature    487..>969
                     /gene="LOC139842970"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggtattat cgatcagaaa tacgactacg aatcgagcac tcgaagccat tgacgcgcta
       61 gatgaattaa gtgataacga agaagtagaa caaataccac gggcacctag aagatattta
      121 catagagatc gtcagggtcg tgcattggct ttatggaatg attatttctc cgacaatccc
      181 acattttcgg acgattattt tcgtaatcgt tatcgaatga gcaaacctct atttcttcgt
      241 atttgtcaag gtatattgaa cttttctcaa actccggttc ctaaatattt tagttatttt
      301 attcaaaaac gtgatgctac cggattactt ggttttaata ttgttcaaaa agtaacatcc
      361 gccatacgtc aactagctta tgccgcttcg gccgatgttt ttgatgagta tttgcatatg
      421 ggtgaacaaa cctcatatga ttgtttaaac aatttttgca aatgtatttt ccacttgtac
      481 gatcccgaat atttgagacg actaactgca caagatgtgc aacgtttgac cactaaacat
      541 gctcaaatac atggtttttc agggatgtta ggaagtattg attgtatgca ttggagatgg
      601 agaaattgtc cggcacgttg gaagggtcat tatacacgag gtgaccatgg ttaccagtca
      661 attatgcttg aagcggtagc atcgtacgat ggatggtttt ggcacgcgtt ttttggaact
      721 gccggatcaa acaatgatat caacgtgata aatcaatccg acttgtttag tgagttatta
      781 gccggtgaag caccaccatg tacgtatacg gttaacggat gtacgtttac taagggttat
      841 tatttagcgg atggaattta cccggaatgg tctacaatag ttaagtcgtt caaaaatccg
      901 atagacccga aacaaaaaaa attcaaaagg tatcaagaat cggcaagaaa agatattgaa
      961 cgagcatttt ga
//
LOCUS       XM_071833066            1151 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842971), partial mRNA.
ACCESSION   XM_071833066
VERSION     XM_071833066.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            <1..1151
                     /gene="LOC139842971"
                     /note="uncharacterized LOC139842971; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842971"
     CDS             <1..1017
                     /gene="LOC139842971"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689167.1"
                     /db_xref="GeneID:139842971"
                     /translation="TWKSSGHYTIPSQAPATNSRVDGTSKSFPSDIQFEERLQAVKRS
                     ALNQKKTEEKITYGAIDYDAPVVSEPSKIGLGTKIGVGVAVVVFGLVFALGDFLPSGS
                     VNSTNDASIVQNALSPEEREKLQKQLQEYEATLRISPDDVVAREGLAVTLTELGEYTR
                     AASTLEDLTKIKPSDPEPFRVLGGVKYEMKDYEGSAAAYRTSAKISQKMNFEVLRGLT
                     NALLAAKKPDEAVKVLLASRDRLEKEKENRDNSDTESQLDPIQVELLLGKAYSDWGHV
                     GDAVSVYDQLISNNPNDFRGYLAKGIILKANGKIGDAERMFIQARFFAPEGAKAIVDR
                     YARQ"
     misc_feature    403..>1011
                     /gene="LOC139842971"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; Region: TPR; COG0457"
                     /db_xref="CDD:440225"
     misc_feature    421..513
                     /gene="LOC139842971"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    526..612
                     /gene="LOC139842971"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    631..702
                     /gene="LOC139842971"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    781..867
                     /gene="LOC139842971"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
     misc_feature    880..960
                     /gene="LOC139842971"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276809"
ORIGIN      
        1 acatggaaaa gttcgggtca ctacactata cctagtcagg cacctgcaac taattcaaga
       61 gtggatggaa catctaaaag ttttccgtcc gatattcagt ttgaggaaag gcttcaggca
      121 gtcaaaaggt ctgcgttgaa ccagaaaaaa actgaagaga aaattacgta tggggcgatt
      181 gactatgatg ctccagttgt atcagagcct agcaaaatag gacttggtac taagattgga
      241 gtaggagttg cagttgttgt tttcgggttg gtatttgctc ttggagattt ccttccttct
      301 ggaagtgtca actcgactaa tgatgctagc atagtacaga atgcgttgtc accagaagag
      361 agagaaaaac tccagaaaca actacaggaa tatgaggcca cccttagaat ttccccagat
      421 gatgtcgtag ctcgtgaagg attagctgta accttaactg agttgggaga gtatactcga
      481 gcggcatcca cgcttgaaga tttaactaag ataaagccta gtgaccctga gccttttcgt
      541 gtgcttggag gagtgaagta tgaaatgaag gactatgaag gtagtgctgc tgcctatagg
      601 acttctgcaa agatatctca aaagatgaat tttgaagtgc ttcgtggtct cacaaatgcg
      661 ttgcttgctg ctaagaaacc tgacgaggct gttaaagtcc ttctggcatc tcgtgaccgt
      721 ttggaaaaag aaaaggaaaa tcgagataac tcagatacgg aatctcaatt ggaccctatc
      781 caagttgaat tacttcttgg aaaagcatac tcagattggg gtcatgttgg tgatgctgtt
      841 tctgtgtatg atcaactcat ctctaacaac ccaaacgatt ttcggggtta tttagctaag
      901 ggaattattc taaaagcaaa tggaaaaatt ggagatgcag aaaggatgtt tatacaagct
      961 cggttttttg caccagaggg agccaaggca attgtggatc gttacgctag acaataactg
     1021 tgttgtaccg atcgtcagtt ttggttaatg tttcttagag gccagattgg attcttttta
     1081 gccgtacaaa agtgtatgta gaagtctata aggccaacaa gtaaacgagt aagtgaattt
     1141 gttgtgacaa a
//
LOCUS       XM_071833067             933 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842972), mRNA.
ACCESSION   XM_071833067
VERSION     XM_071833067.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..933
                     /gene="LOC139842972"
                     /note="uncharacterized LOC139842972; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842972"
     CDS             1..933
                     /gene="LOC139842972"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689168.1"
                     /db_xref="GeneID:139842972"
                     /translation="MAWVKWDDVMLSFGDGGLNVGYIDSLGVPFRSSFAKVIGNGSST
                     SFWKDYWLGNFTLEDKFKRLARLESNINATVHERLFSNEVDCIGSWAWTRSPSGRVAG
                     EFAELLELLRATTLVNNKEDSWRWLLSGNGLFSSRVLTETINSSILQVAPSCSETLRN
                     NLVPSKVDVFVWQVRKRRIPVLTELDKRGIDLNSVRCPICDDGVETVDHSMVLCKLAY
                     DIWEKVFDWWGLGSVSNLSISEMFCGNSNVVMSEEGQKIWQAVEWTCGYLIWKNRNSK
                     VFKNKCWNLPVALSDIQVRSFDWIAKRSCENGSA"
     misc_feature    <478..660
                     /gene="LOC139842972"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcttggg taaaatggga tgatgttatg ctttcgtttg gggacggggg tctaaatgtg
       61 ggctacatcg attctttagg tgttcctttc aggtcttcat ttgctaaagt aattggtaat
      121 gggtcgtcta cgtccttttg gaaagattac tggttgggta acttcacgtt ggaagataaa
      181 ttcaagagac ttgctcgttt ggaaagcaat atcaatgcta cggttcatga aaggttattt
      241 tcgaatgagg tggactgtat tggttcgtgg gcatggacta gatccccatc tggacgggtt
      301 gcaggcgaat ttgctgagtt attggagtta cttcgtgcga ctacacttgt caataataag
      361 gaagactcat ggcgctggct tttaagtggt aatggactgt tctcgtctcg ggtcctgacg
      421 gagacaatca acagcagtat cctgcaggtg gccccttcgt gctcggaaac gttgcgaaat
      481 aatttagtac ctagcaaagt ggatgtattc gtgtggcagg ttcggaaaag acgcatcccg
      541 gttctaactg aattggataa gcgaggtata gatttaaact ctgtccgttg cccgatttgt
      601 gatgatggtg tcgaaactgt agatcactct atggttttat gcaagctcgc ttacgacatt
      661 tgggaaaaag tttttgattg gtgggggcta ggtagcgtat caaatttgag tattagtgaa
      721 atgttttgcg gaaattctaa tgtggtgatg tcggaagagg ggcagaaaat ttggcaagcg
      781 gttgagtgga cttgtggata tctcatttgg aaaaatcgta actccaaagt ttttaaaaat
      841 aaatgctgga atttaccggt tgcccttagt gacatccaag tgagaagctt tgattggatc
      901 gcgaagagat cctgtgagaa tgggtctgca taa
//
LOCUS       XM_071833068             474 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides palmitoyl-acyl carrier
            protein thioesterase, chloroplastic-like (LOC139842974), mRNA.
ACCESSION   XM_071833068
VERSION     XM_071833068.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..474
                     /gene="LOC139842974"
                     /note="palmitoyl-acyl carrier protein thioesterase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 22 Proteins"
                     /db_xref="GeneID:139842974"
     CDS             1..474
                     /gene="LOC139842974"
                     /codon_start=1
                     /product="palmitoyl-acyl carrier protein thioesterase,
                     chloroplastic-like"
                     /protein_id="XP_071689169.1"
                     /db_xref="GeneID:139842974"
                     /translation="MVCAIIGYFVIPKQESTMVMMNKETRRLAKFPSEVRVEYEKYLR
                     YAAFSRTRENKIPRWDDLDVHQHVNNVKYIGWILQSVPRSIMKNYELVNVKLEYQREC
                     TMDSVLQSSTFVIGTENGKTGNNDHVDCKHLLELEPGSGCDEIAKAKTSWRLKHE"
     misc_feature    <37..468
                     /gene="LOC139842974"
                     /note="acyl-ACP thioesterase; Region: PLN02370"
                     /db_xref="CDD:215210"
ORIGIN      
        1 atggtatgtg caataattgg atattttgtg attccaaaac aggagagtac tatggtgatg
       61 atgaataaag agacaagaag gcttgccaaa ttcccaagtg aagttcgagt tgaatatgag
      121 aagtacttga gatacgccgc ctttagtcga actcgagaaa ataaaattcc aagatgggac
      181 gatttggatg tgcatcaaca tgttaacaat gtgaaataca ttgggtggat tctccagagc
      241 gttccaaggt caattatgaa aaattatgag cttgttaatg tgaaattaga gtatcaacga
      301 gagtgtacga tggatagtgt gttgcaatca agcacttttg taattgggac cgaaaatggg
      361 aaaacaggta acaatgatca tgttgattgt aagcatctac ttgaacttga gcctggaagt
      421 ggttgtgatg agatcgcgaa agccaagact agttggcgtt taaaacatga ataa
//
LOCUS       XM_071833069             933 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842975), mRNA.
ACCESSION   XM_071833069
VERSION     XM_071833069.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..933
                     /gene="LOC139842975"
                     /note="uncharacterized LOC139842975; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842975"
     CDS             1..933
                     /gene="LOC139842975"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689170.1"
                     /db_xref="GeneID:139842975"
                     /translation="MAWVKWDDVMLSFGDGGLNVGYIDSLGVPFRSSFAKVIGNGSST
                     SFWKDYWLGNFTLEDKFKRLARLESNINATVHERLFSNEVDCIGSWAWTRSPSGRVAG
                     EFAELLELLRATTLVNNKEDSWRWLLSGNGLFSSRVLTETINSSILQVAPSCSETLRN
                     NLVPSKVDVFVWQVRKRRIPVLTELDKRGIDLNSVRCPICDDGVETVDHSMVLCKLAY
                     DIWEKVFDWWGLGSVSNLSISEMFCGNSNVVMSEEGQKIWQAVEWTCGYLIWKNRNSK
                     VFKNKCWNLPVALSDIQVRSFDWIAKRSCENGSA"
     misc_feature    <478..660
                     /gene="LOC139842975"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggcttggg taaaatggga tgatgttatg ctttcgtttg gggacggggg tctaaatgtg
       61 ggctacatcg attctttagg tgttcctttc aggtcttcat ttgctaaagt aattggtaat
      121 gggtcgtcta cgtccttttg gaaagattac tggttgggta acttcacgtt ggaagataaa
      181 ttcaagagac ttgctcgttt ggaaagcaat atcaatgcta cggttcatga aaggttattt
      241 tcgaatgagg tggactgtat tggttcgtgg gcatggacta gatccccatc tggacgggtt
      301 gcaggcgaat ttgctgagtt attggagtta cttcgtgcga ctacacttgt caataataag
      361 gaagactcat ggcgctggct tttaagtggt aatggactgt tctcgtctcg ggtcctgacg
      421 gagacaatca acagcagtat cctgcaggtg gccccttcgt gctcggaaac gttgcgaaat
      481 aatttagtac ctagcaaagt ggatgtattc gtgtggcagg ttcggaaaag acgcatcccg
      541 gttctaactg aattggataa gcgaggtata gatttaaact ctgtccgttg cccgatttgt
      601 gatgatggtg tcgaaactgt agatcactct atggttttat gcaagctcgc ttacgacatt
      661 tgggaaaaag tttttgattg gtgggggcta ggtagcgtat caaatttgag tattagtgaa
      721 atgttttgcg gaaattctaa tgtggtgatg tcggaagagg ggcagaaaat ttggcaagcg
      781 gttgagtgga cttgtggata tctcatttgg aaaaatcgta actccaaagt ttttaaaaat
      841 aaatgctgga atttaccggt tgcccttagt gacatccaag tgagaagctt tgattggatc
      901 gcgaagagat cctgtgagaa tgggtctgca taa
//
LOCUS       XM_071833072            1141 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides palmitoyl-acyl carrier
            protein thioesterase, chloroplastic-like (LOC139842977), mRNA.
ACCESSION   XM_071833072
VERSION     XM_071833072.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1141
                     /gene="LOC139842977"
                     /note="palmitoyl-acyl carrier protein thioesterase,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 24 Proteins"
                     /db_xref="GeneID:139842977"
     CDS             1..1086
                     /gene="LOC139842977"
                     /codon_start=1
                     /product="palmitoyl-acyl carrier protein thioesterase,
                     chloroplastic-like"
                     /protein_id="XP_071689173.1"
                     /db_xref="GeneID:139842977"
                     /translation="MAVSAPFCLSSFWNHGMTFSNLRGAKRTIHMHGSINTKYAASSW
                     GLKVNVPAKVTVTRVGAIDSSSVIDLDVGRMVDRFIFRRNFDVRTYETGPDRKVSIET
                     LMNILQETAINHIKAIGLLGDGLGLSPEMCKKNLIWVMGKMLVEVDSYPMCGDIIQVD
                     TWKAAYGKIGMYSNWKLCDAKTGEILIRASCVWLMMNTETRKLSKFPDEVRDEFDKYF
                     VDTPPIVNYDNQKWSTRNENTVHHVCHGLAPTWSDLDINQHVNNARYIGWILKSVPRI
                     ILEKYEIVNMALEYCQECRNDNVLQSHTFVVGTNDDKLADNGHVELEHLLELEIGSSG
                     GGGEIMKGRTTWQSKHGKGAHRHRHFQ"
     misc_feature    <214..1050
                     /gene="LOC139842977"
                     /note="acyl-ACP thioesterase; Region: PLN02370"
                     /db_xref="CDD:215210"
ORIGIN      
        1 atggctgtta gcgcaccttt ctgtttgagc tctttctgga accatggcat gacatttagt
       61 aatcttcgag gcgcaaaacg aactatacat atgcatggaa gcataaacac aaaatatgca
      121 gcttcttcat ggggtttaaa agtaaatgtt cctgcaaagg taactgtcac aagagttggg
      181 gcgatagatt cgagttctgt tattgatctt gatgtaggaa ggatggtaga tcgctttata
      241 ttcaggcgga acttcgatgt tagaacctat gaaactgggc cagatcgaaa agtttctata
      301 gaaacactaa tgaatatctt acaggaaaca gccattaacc atataaaggc aataggactc
      361 ttgggtgacg gcttaggttt atcacctgag atgtgcaaga agaacctcat ttgggtgatg
      421 gggaagatgc tagttgaagt ggactcttat ccaatgtgtg gtgacattat tcaagttgat
      481 acatggaaag ctgcgtatgg aaaaattggt atgtactcga attggaaact ttgcgacgca
      541 aaaacagggg agatattgat aagagcttca tgtgtttggc tgatgatgaa tacagagacg
      601 agaaagcttt ctaaattccc agatgaagta cgagatgaat ttgataaata ctttgtagat
      661 acaccaccta tagttaatta tgataatcaa aaatggtcaa cacgcaatga gaacaccgta
      721 caccatgttt gtcatggttt agcgccaaca tggagtgatt tagatataaa ccaacatgtt
      781 aacaatgcta gatatattgg atggatccta aagagtgttc caaggatcat cttggagaag
      841 tatgagatag ttaacatggc gttagagtac tgccaagagt gtaggaatga caacgtgttg
      901 cagtcccaca cgtttgttgt ggggaccaac gatgacaagc ttgccgataa cggccatgtt
      961 gaacttgagc atctactaga acttgagatt ggaagtagtg gtggtggtgg tgagatcatg
     1021 aaaggtagga ctacttggca gtcaaaacat ggaaagggag ctcaccgaca ccgacacttc
     1081 cagtgaaagg agccacccgg gttcgattct tggcactgtc atctcgttca aaaagggagc
     1141 t
//
LOCUS       XM_071833073            1161 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842978), mRNA.
ACCESSION   XM_071833073
VERSION     XM_071833073.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1161
                     /gene="LOC139842978"
                     /note="uncharacterized LOC139842978; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842978"
     CDS             1..1161
                     /gene="LOC139842978"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689174.1"
                     /db_xref="GeneID:139842978"
                     /translation="MVVVVDVVVTWMKSTVVINDGGGGGGYSELDHPFEVPLVEDSDS
                     DGGKDRDAEFQYEEEKQDPFWNMPTLLSQHEEEREQTTEIPTTYRVSDLIKVRQTFLN
                     KEGETNESLDWFLGNLRDHLMTWGMGDRMSELTFISDRGLPIARGVLTVFPEAFHCFR
                     ARHLFASIKSKSNKFKYFEWHYWKIVKAYRASDFEDHLNVFRRRLKASYKILSDVGLT
                     STVTPYAEHKLAKRTKKSRRWQAIPSTNNLVEVRDGRKNVLVNLADKVCSCGQWQGSG
                     IPCGHVIAAARLFGVADVTQFVSHWFTTETYISTYMEHILPLPHRSEWSDPGPNVLPI
                     VNPPIKPKRAPGRPKSTKRHPSTGEDTEKIVRTCTRCKEPGHGRDTCKSSVD"
     misc_feature    799..873
                     /gene="LOC139842978"
                     /note="plant mutator transposase zinc finger; Region:
                     ZnF_PMZ; smart00575"
                     /db_xref="CDD:128845"
ORIGIN      
        1 atggtggtgg tggtggacgt tgtggttact tggatgaaat caacagtggt aataaatgac
       61 ggtggtggtg gtggtggtta ctccgaatta gaccacccgt ttgaggtacc tcttgtcgaa
      121 gatagtgatt cagatggagg aaaagaccga gacgcagaat tccaatatga agaagaaaag
      181 caagatccgt tctggaatat gccaactctt ttgagtcagc atgaggaaga gcgcgaacag
      241 acgactgaaa taccaaccac gtatagggtg tcagatttaa ttaaagtccg tcaaactttc
      301 ttgaacaaag aaggcgagac aaacgagtct ttggattggt ttttgggcaa cctacgagac
      361 catttgatga cttggggaat gggtgatcgt atgtcagagc ttacttttat ttcggatcga
      421 ggtttgccaa tagcacgtgg tgttttaacc gtgttccccg aagcgtttca ctgttttcgc
      481 gctcgtcatt tgtttgcaag cattaaaagt aaatccaaca aattcaaata ttttgaatgg
      541 cattattgga aaatagtcaa agcttatcgt gcgtcggatt ttgaggatca tcttaatgta
      601 tttagaagaa gattgaaagc gtcttacaaa attttaagtg atgtcggtct tacttcaact
      661 gttactccat atgctgaaca taaactagct aagaggacga aaaagtcaag aagatggcaa
      721 gcaattccat cgacaaacaa tctagtagaa gtgcgcgatg gacgaaaaaa tgtccttgtt
      781 aatctagcag ataaagtttg ttcatgtggg cagtggcagg gatcaggcat accttgcgga
      841 catgttattg cagcagcacg actgtttgga gtagctgatg ttactcaatt tgtatctcat
      901 tggttcacga cagaaactta tataagtacg tatatggaac acatccttcc tttgccccat
      961 cggtctgaat ggtcggatcc ggggcccaac gtcctaccaa ttgtaaaccc tcccattaag
     1021 ccgaaaagag ctcctggacg cccaaaatca acaaaacgtc atccgtcaac gggtgaagac
     1081 actgaaaaaa tagtaagaac atgtactcgt tgcaaagaac caggtcatgg tagggatacg
     1141 tgcaaatctt cagttgattg a
//
LOCUS       XM_071833074            1323 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chitinase CLP-like
            (LOC139842980), mRNA.
ACCESSION   XM_071833074
VERSION     XM_071833074.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1323
                     /gene="LOC139842980"
                     /note="chitinase CLP-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842980"
     CDS             1..1323
                     /gene="LOC139842980"
                     /codon_start=1
                     /product="chitinase CLP-like"
                     /protein_id="XP_071689175.1"
                     /db_xref="GeneID:139842980"
                     /translation="MKLFIQLTVLFIAFISHKHEAIAISNLTYTSFVFPVNKHTDAAK
                     TLYSINLMTTFVNMQFSHANFLIDIEGPLTWHDCILLWSTDPETSCPKDKLCKSPISC
                     EEVECTRFRANSFEKSSCPPMTNRSTSPGWGFCTCPVNLKNPINGNCVQPELNGDSFA
                     ANASDGRNPFLVYHDINIYAACAPSNSFTSFPTNVSGVMAFSNSPYALPAYYSRSSIK
                     ASVALCLPSTSSANGVLFFGSGPFYLLPHSDVDLRSLLSYTPLLKRPDSFSYFIGVNA
                     IVIKHRSIDVVGTTTTKLSTTEPYTTLKTDIYNWVIRRYSVVTKRMLRADPIAPFSLC
                     YRSNIDGTQADVNFPDIEFSLPDGKNWTIYTSNLIKQVTNDVACLAFVDGGATSEHAI
                     VIGTFQMEDNFLHFDIENLSLGFSSSLLNKDTSCANFNFTTGSMDMYP"
     misc_feature    157..1230
                     /gene="LOC139842980"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(202..204,208..210,214..216,418..426,592..594)
                     /gene="LOC139842980"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    202..210
                     /gene="LOC139842980"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    202..204
                     /gene="LOC139842980"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(418..429,445..456)
                     /gene="LOC139842980"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgaaactgt ttatccaact aactgttctg tttatagcat tcatttccca caaacatgaa
       61 gctatagcaa tatctaatct aacttacact tcctttgttt ttccggttaa taaacatacc
      121 gatgctgcaa agacacttta tagcattaac ctcatgacaa cattcgtaaa catgcaattc
      181 tcacacgcaa actttcttat tgacatcgaa ggtcctttaa cttggcatga ttgcatattg
      241 ttatggagta cggatccaga aacaagttgc ccaaaagaca agctttgcaa gtcacctatt
      301 tcttgtgaag aagttgaatg cacacgattt cgtgcaaact ctttcgaaaa gtcttcctgc
      361 ccgccaatga ccaacagatc cacgtcacca ggttggggat tttgcacgtg cccagtcaat
      421 ttgaaaaatc ccatcaacgg aaactgtgtt caaccagaac ttaacggtga ttcattcgca
      481 gcaaatgcaa gtgacggtcg aaaccctttt cttgtttacc acgatatcaa tatttacgct
      541 gcgtgtgcac cttccaactc ttttacatca ttccccacaa atgtttctgg tgtcatggcg
      601 ttttcaaact cgccttacgc gttacctgcc tattactctc gatcatcgat caaagcaagc
      661 gtagctttat gtttgcctag tacctcgtct gctaacggtg ttttattttt cggatcaggt
      721 cctttttacc ttcttcccca ttctgatgtt gatttaagga gtttactttc ttatactccg
      781 ttactaaagc gtcccgattc ttttagttac tttatcggtg tcaatgccat tgtaatcaaa
      841 cacagatcta tcgacgttgt agggaccaca actactaaac tcagtacaac cgaaccttac
      901 accacgttaa aaaccgatat ctacaattgg gtcatccgta ggtattcagt ggttacaaaa
      961 cgaatgctgc gtgcggaccc cattgcaccg tttagcctct gttacagaag caacatagac
     1021 ggaacccaag cggatgtaaa ctttccggac atcgaattta gtctcccgga cgggaagaat
     1081 tggactatat acactagtaa tttgattaaa caagttacaa atgacgtggc atgcttggcg
     1141 tttgttgatg gtggtgcgac gagtgaacat gcaatcgtaa tcgggacttt tcaaatggag
     1201 gataacttct tacattttga tattgaaaat ttaagtttag ggtttagttc ttctttacta
     1261 aataaagata cttcttgtgc aaacttcaac ttcaccactg gttccatgga tatgtacccc
     1321 tga
//
LOCUS       XM_071833075            1305 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides chitinase CLP-like
            (LOC139842981), mRNA.
ACCESSION   XM_071833075
VERSION     XM_071833075.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1305
                     /gene="LOC139842981"
                     /note="chitinase CLP-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:139842981"
     CDS             1..1305
                     /gene="LOC139842981"
                     /codon_start=1
                     /product="chitinase CLP-like"
                     /protein_id="XP_071689176.1"
                     /db_xref="GeneID:139842981"
                     /translation="MFHFLQMILFFLAFFFLEHKSTAQYIPPYNSFFIPLNKHTDAAK
                     PLFSVQIMTSYTNFQFNHSNFLIDIDAPISWHDCIVQWNMYQGSCPENVLCTSAVNCD
                     EDICTEVQKYSYISPYCPRLKNTTQSPTGYCACPVNVMDPVDGSCSQPLLNYDTFFVN
                     TSNGRNPLPGFYAAFSNAACAPSSSFQLFPNNVNGVIAFSSSPYAFLLSLDQQPLKKI
                     FSLCLPSTSAAPGILFYGNGPYYLNPNSNVDLRSYLSYTPLLNHPDSFGYFIRVDSIV
                     IRNRSINVPANTTTKLSTIEPYTTLRTDIYNGLIRRFLMVTKRMLPAKPVAPFSNCYS
                     TVANGTKFKLKVPDIDLILSGGTKWTISKTNSMKHITQYVSCLAFVDGGETPEHAIVI
                     GTFQFEDNFLEFNLEDSTFGFSSSLLSKKTSCSHYNHTIVTR"
     misc_feature    190..1239
                     /gene="LOC139842981"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(202..204,208..210,214..216,412..420,586..588)
                     /gene="LOC139842981"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    202..210
                     /gene="LOC139842981"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    202..204
                     /gene="LOC139842981"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(412..423,439..450)
                     /gene="LOC139842981"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgtttcatt ttctacaaat gatacttttc tttctagctt ttttcttcct tgaacataaa
       61 tctacagcac aatatatacc accttataat tcctttttca ttccactaaa taagcatacc
      121 gatgccgcca agcctctttt tagtgtccag atcatgacgt catacacaaa cttccaattt
      181 aatcactcaa atttccttat agacatcgac gctcctatct catggcacga ttgcattgtc
      241 caatggaaca tgtatcaagg aagttgtcct gaaaacgtac tttgcacctc tgcagtcaat
      301 tgtgatgaag atatttgtac agaggtacaa aagtactctt atataagtcc ttactgccct
      361 cgtttaaaaa atacgaccca atcacctaca gggtattgcg cgtgtccggt taacgttatg
      421 gaccctgtag acggatcgtg tagtcaaccg ttgctcaact atgacacctt ttttgtgaac
      481 acaagtaacg gtaggaaccc tcttcctggt ttctatgctg ctttctcaaa cgcggcatgt
      541 gctccttctt cgtcatttca attgttccct aataatgtga acggtgtcat agcattttcg
      601 tcgtctccat atgcatttct gttatcttta gatcaacaac cactcaaaaa aatattttct
      661 ttatgtttac ctagcacatc tgctgctccc gggatcctat tttacggaaa tggtccttat
      721 tacttgaatc ccaactcgaa tgttgactta aggagttatc tttcttacac tccgttacta
      781 aaccatccag attctttcgg atactttatt cgtgtcgata gcattgttat cagaaacaga
      841 tctatcaatg ttcctgcaaa tacaactacc aagcttagta caattgagcc ttacactact
      901 cttagaactg atatatacaa cggattgatt agaaggtttt taatggttac aaaacgaatg
      961 cttcctgcaa aaccagtagc gccgtttagc aattgttata gcaccgtagc caatggtacc
     1021 aaattcaaat taaaagttcc tgatattgat ttgattctct cgggtgggac caagtggact
     1081 atatcgaaga ccaactcaat gaaacatata acgcaatatg tgtcatgcct tgcttttgtt
     1141 gatggtggtg aaacaccaga acatgcaata gtgattggga cattccaatt tgaggataac
     1201 tttctcgagt ttaatttaga ggattcgact tttgggttta gttcttcgct gttaagtaag
     1261 aagacttctt gttcgcacta caaccatacc attgttacca gatga
//
LOCUS       XM_071833076            1308 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides probable aspartic proteinase
            GIP2 (LOC139842982), mRNA.
ACCESSION   XM_071833076
VERSION     XM_071833076.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1308
                     /gene="LOC139842982"
                     /note="probable aspartic proteinase GIP2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139842982"
     CDS             1..1308
                     /gene="LOC139842982"
                     /codon_start=1
                     /product="probable aspartic proteinase GIP2"
                     /protein_id="XP_071689177.1"
                     /db_xref="GeneID:139842982"
                     /translation="MFHLLKMILFFLAFFVLKHEYSTAQYIPPYTSFFIPLNKHTDAA
                     KPLFSAQIMTSYSNFQFNHSNFLIDIDAPITWHDCIVQWNMYQRNCPENVLCTDAVNC
                     DEDICTEVQKYSYISPYCPRLKRTAPSPTGNCTCPINVMNPVDIWCSQPVVNYDTFFV
                     NTSNGRNPLPVFISASLNAACAPSSSFELFPNNVNGVIAFSSSPYTFILSLDQPPLKK
                     IFSLCLPSTTAAPGILFYGNGPYYFIPNSNVDVRSYLSYTPLLNHPDSFGYFIGVDSI
                     VIKNRSINVPANSTTKLSTIEPYTALRTDIYNSVVRRFSLVTKRLIPTSPVPPFSNCY
                     NTISNGTKLKLKVPHIDLILSGGNKWTISTTNSMKYVTQNVSCLAFVDGGATPNYAIV
                     IGTFQFEDNFLELNLENSTFGFSSSLLRKHTSCSHYNHTIVTG"
     misc_feature    193..1254
                     /gene="LOC139842982"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(205..207,211..213,217..219,415..423,589..591)
                     /gene="LOC139842982"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    205..213
                     /gene="LOC139842982"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    205..207
                     /gene="LOC139842982"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(415..426,442..453)
                     /gene="LOC139842982"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgtttcatc ttctaaaaat gatacttttc tttttagctt tctttgtcct taaacatgaa
       61 tattcaacgg cacaatatat accaccttat acttcctttt tcatcccact aaataaacat
      121 actgatgccg ccaagcctct cttcagtgcc cagatcatga catcatactc gaacttccag
      181 tttaatcact caaattttct tatagacatc gacgctccta tcacatggca cgattgcatt
      241 gtgcaatgga acatgtatca aagaaattgt cctgaaaacg tactttgcac cgatgcagtc
      301 aattgtgatg aagatatttg tacagaggta caaaagtact cttatataag tccttactgc
      361 cctcgtttaa aacgtacggc cccatcacct acgggtaatt gcacgtgtcc gattaatgtt
      421 atgaaccctg tagatatatg gtgcagtcaa cctgtggtca actatgacac cttttttgtg
      481 aacacaagta atggtaggaa ccctcttcct gttttcattt ctgcttcctt aaacgctgca
      541 tgcgctcctt cttcatcatt tgagttgttc cctaataatg tgaacggtgt catagcattt
      601 tcgtcgtctc catatacatt tatattatct ttagatcaac caccactcaa gaaaatattt
      661 tctctatgtt tacctagcac aactgctgct cctggtatcc tattttacgg aaatggtcct
      721 tattacttta ttcccaactc gaatgttgac gtaaggagtt atctttctta cactccgtta
      781 ctaaatcatc cagattcttt cggatacttt atcggtgtcg atagcatcgt tattaaaaac
      841 agatcaatca atgttcctgc aaattcgacc accaagctta gtacaattga gccttacacc
      901 gctcttagaa ctgacattta taatagcgtg gttcgaaggt tttcattggt tacaaaacga
      961 ctcattccta caagcccagt accaccgttt agcaattgtt acaacaccat atccaatggt
     1021 accaaattaa aattaaaagt tcctcatatt gatttgattc tttcgggtgg gaacaagtgg
     1081 actatatcga caactaactc catgaaatat gtaacacaaa atgtgtcatg ccttgctttt
     1141 gttgatggtg gcgcgacacc aaattatgca atcgtcattg gaacattcca atttgaggat
     1201 aactttctgg agttaaattt agagaattca acttttgggt ttagttcttc gctgttacgt
     1261 aagcacactt cttgttcaca ctacaaccat accattgtta ccggctaa
//
LOCUS       XM_071833077             792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842983), mRNA.
ACCESSION   XM_071833077
VERSION     XM_071833077.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..792
                     /gene="LOC139842983"
                     /note="uncharacterized LOC139842983; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842983"
     CDS             1..792
                     /gene="LOC139842983"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689178.1"
                     /db_xref="GeneID:139842983"
                     /translation="MVFQQQLVLFIMAFMYLSYEHEVVAQWVPPYTSVVAQVLKHTDL
                     AKPLFSVQIMTKYVNMNFIHTNFLIDIDAPFICHDCIVQWNMNPNSCPGNTICLSPYS
                     CEDYQCTDIRTSSSYQQYSSSCPPATNSSTLPGWGVCSCPVDTVDPINGSCGEALLNS
                     DELFFNATNGRNAFPDFYRFYPDAACAPSYSFDSFPANVSGVMALSTSPNAPPSYIFG
                     VAFTKSFSLCLPSSVSNTGVFLLVHNPKFYYVICSIRIVFSISVM"
     misc_feature    370..>714
                     /gene="LOC139842983"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(430..441,457..468)
                     /gene="LOC139842983"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atggttttcc aacaacaatt agttcttttc attatggctt tcatgtatct ctcttatgaa
       61 catgaagtcg ttgcgcaatg ggtaccacca tacacgtcgg tagtcgctca agttttaaaa
      121 cataccgatt tagctaaacc tctgttcagc gttcagatta tgaccaaata cgtaaacatg
      181 aattttatcc acacaaactt cctcatagac atcgatgctc cattcatatg ccacgattgc
      241 atcgttcagt ggaacatgaa tccaaacagt tgccccggca acacaatttg tttgtctccc
      301 tattcttgtg aagattatca atgcacagac attcgaacgt cttcttctta tcagcaatat
      361 tcttcttcat gtcctccagc aaccaacagt tcgacattac ctggttgggg agtttgctca
      421 tgccccgtgg ataccgtgga ccccattaac ggatcatgcg gtgaagcatt gttgaattct
      481 gatgagttat ttttcaatgc aactaacggt agaaacgctt ttcctgattt ttatagattt
      541 taccctgacg ccgcatgtgc tccttcttat tcatttgact cgtttcctgc aaatgttagc
      601 ggtgtaatgg ctttgtccac ctcaccaaac gcgccaccat cgtatatttt tggagtcgca
      661 tttacaaaat cattttctct atgtttgcct agttcagtgt caaacactgg ggtgttcttg
      721 ttggtgcata atcccaagtt ctattatgta atatgttcta ttcgtattgt gttttctatt
      781 tcagtcatgt aa
//
LOCUS       XM_071833078             792 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842984), mRNA.
ACCESSION   XM_071833078
VERSION     XM_071833078.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..792
                     /gene="LOC139842984"
                     /note="uncharacterized LOC139842984; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842984"
     CDS             1..792
                     /gene="LOC139842984"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689179.1"
                     /db_xref="GeneID:139842984"
                     /translation="MVFQQQLVLFIMAFMYLSYEHEVVAQWVPPYTSVVAQVLKHTDL
                     AKPLFSVQIMTKYVNMNFIHTNFLIDIDAPFICHDCIVQWNMNPNSCPGNTICLSPYS
                     CEDYQCTDIRTSSSYQQYSSSCPPATNSSTLPGWGVCSCPVDTVDPINGSCGEALLNS
                     DELFFNATNGRNAFPDFYRFYPDAACAPSYSFDSFPANVSGVMALSTSPNAPPSYIFG
                     VAFTKSFSLCLPSSVSNTGVFLLVHNPKFYYVICSIRIVFSISVM"
     misc_feature    370..>714
                     /gene="LOC139842984"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(430..441,457..468)
                     /gene="LOC139842984"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atggttttcc aacaacaatt agttcttttc attatggctt tcatgtatct ctcttatgaa
       61 catgaagtcg ttgcgcaatg ggtaccacca tacacgtcgg tagtcgctca agttttaaaa
      121 cataccgatt tagctaaacc tctgttcagc gttcagatta tgaccaaata cgtaaacatg
      181 aattttatcc acacaaactt cctcatagac atcgatgctc cattcatatg ccacgattgc
      241 atcgttcagt ggaacatgaa tccaaacagt tgccccggca acacaatttg tttgtctccc
      301 tattcttgtg aagattatca atgcacagac attcgaacgt cttcttctta tcagcaatat
      361 tcttcttcat gtcctccagc aaccaacagt tcgacattac ctggttgggg agtttgctca
      421 tgccccgtgg ataccgtgga ccccattaac ggatcatgtg gtgaagcatt gttgaattct
      481 gatgagttat ttttcaatgc aactaacggt agaaacgctt ttcctgattt ttatagattt
      541 taccctgacg ccgcatgtgc tccttcttat tcatttgact cgtttcctgc aaatgttagc
      601 ggtgtaatgg ctttgtccac ctcaccaaac gcgccaccat cgtatatttt tggagtcgca
      661 tttacaaaat cattttctct atgtttgcct agttcagtgt caaacactgg ggtgttcttg
      721 ttggtgcata atcccaagtt ctattatgta atatgttcta ttcgtattgt gttttctatt
      781 tcagtcatgt aa
//
LOCUS       XM_071833079            1311 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides gamma conglutin 1-like
            (LOC139842985), mRNA.
ACCESSION   XM_071833079
VERSION     XM_071833079.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1311
                     /gene="LOC139842985"
                     /note="gamma conglutin 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139842985"
     CDS             1..1311
                     /gene="LOC139842985"
                     /codon_start=1
                     /product="gamma conglutin 1-like"
                     /protein_id="XP_071689180.1"
                     /db_xref="GeneID:139842985"
                     /translation="MAFQQQLVVFIMAFFMYLSTYEHEAIAQWLPSYNSVVTQVTKHT
                     DSTKPLYSINIMTKYVWDDTRHTNFLIDIDAPFIWYDCIPKWDMYQNGCDTNTNCAPP
                     VSCGESQCTDIQTSSSYKQYSSSCPPATNSSTTLPGWDGCTCPVSIVNPIKGSCSEAV
                     LTYGDLMIESPFFVSLHPNALCAPSSSFDSFPKNVSGVVALSTSSYALPSLSVTSGLF
                     RRSFSLCLPSSVSNTGVFFLGTSSYYFFPNSKLDVRSYLSYTPLLNHPDSFGYFIGVK
                     SIVIKKRAINVPANTTTKLSTLEPYTTFRTDIYNQVVRRFLKVTRELTMAKPIAPFDF
                     CYEASANGTTKVGLKVPNIDFSLEDGKNWTVHTANSMKQVTKDVACLAFVDGGATSEH
                     GIVIGTHQMEDNFLTFDLVNSTLGFSSSLLTKGTSCSSFKSIGN"
     misc_feature    202..1263
                     /gene="LOC139842985"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(214..216,220..222,226..228,439..447,592..594)
                     /gene="LOC139842985"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    214..222
                     /gene="LOC139842985"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    214..216
                     /gene="LOC139842985"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(439..450,466..477)
                     /gene="LOC139842985"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atggcattcc aacaacaatt agttgttttc attatggcct tcttcatgta tctctctact
       61 tatgaacatg aagccattgc tcaatggtta ccatcataca attctgtagt cactcaagtt
      121 accaaacata cagattccac taaacctctc tatagcatta acattatgac taaatacgta
      181 tgggatgata ctagacacac aaacttcctc atagacatcg acgctccatt catatggtac
      241 gattgcatcc ctaagtggga catgtatcaa aacggttgcg acaccaacac gaactgtgcg
      301 ccacctgttt cttgtggtga atctcaatgc acagacattc aaacctcttc ttcttataaa
      361 caatattctt cttcatgtcc tcctgctacc aacagttcga caacattacc tggttgggac
      421 ggttgcacat gccccgtgag tatagtaaac cccattaaag ggtcgtgcag tgaagcagtg
      481 ctaacttacg gtgatttaat gattgaatct ccttttttcg ttagtttaca ccctaacgcc
      541 ctatgtgctc cgtcttcttc atttgactcg tttcccaaaa atgttagcgg tgtagtggct
      601 ttatccacct catcatacgc attaccatca ctatcggtaa cttcgggatt atttcgaaga
      661 tccttttctc tatgtttgcc tagttcagtg tctaacactg gtgtgttctt ccttggaact
      721 agttcatatt atttttttcc aaattcaaaa ctcgacgtaa gaagttatct ttcttatact
      781 ccgttactaa accatccaga ttcttttgga tactttatcg gtgtcaaaag cattgtaata
      841 aagaagagag ctattaatgt tccagcgaat accactacaa agctgagtac gcttgagcct
      901 tacaccactt tcagaaccga catttacaat caagtggttc gaaggttctt aaaggttaca
      961 agagaactca ctatggcaaa gccaatcgca ccattcgact tttgttacga agcatcagcc
     1021 aatggtacta ctaaagttgg tttaaaagtt ccaaatattg attttagtct tgaagatggg
     1081 aagaattgga ctgtacacac tgctaactcc atgaagcaag tgacaaaaga tgtagcgtgt
     1141 ctagcgtttg tagatggtgg tgcgacaagt gaacatggaa ttgtaatcgg aacacatcag
     1201 atggaagata acttcttgac gttcgattta gtgaattcga ctttgggatt cagttcttcc
     1261 ttattgacta aaggaacttc ttgttcaagc tttaagtcta tcggcaactg a
//
LOCUS       XM_071833080             906 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842986), mRNA.
ACCESSION   XM_071833080
VERSION     XM_071833080.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..906
                     /gene="LOC139842986"
                     /note="uncharacterized LOC139842986; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842986"
     CDS             1..906
                     /gene="LOC139842986"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689181.1"
                     /db_xref="GeneID:139842986"
                     /translation="MAFQQQLVLFIMAFFMSLSTYEHQVIALWEPPHTSPVAKVSKHT
                     DSTKPLYSVQVISKYVRTYFFYTNFLIDIDTPFIWYNCILKWDMNPNSCPGNTICASP
                     ISCEQHQCTDIRTSSSYNQYSSSCPPATNSSMTLPSWSGCTCPVSIVDPVNGSCAEAL
                     LNSAELFFNEPYMYGFYPNGACAPSSSFDTFLANVSSVMALSSNTFLSYISDPYPSLY
                     SLCFPSSVSNTGVFFLGSSSYYFSPNSDVDVRSYLTYTPLLKYPDSFGYFIGVKSIVI
                     KKRAITVSANTTTKLSTLEPYTCFD"
     misc_feature    202..>894
                     /gene="LOC139842986"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(214..216,220..222,226..228,439..447,592..594)
                     /gene="LOC139842986"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     misc_feature    214..222
                     /gene="LOC139842986"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     misc_feature    214..216
                     /gene="LOC139842986"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     misc_feature    order(439..450,466..477)
                     /gene="LOC139842986"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atggcattcc aacaacaatt agttcttttc attatggcct tcttcatgtc tctctctact
       61 tatgagcatc aagtcattgc tctatgggaa ccaccacaca cttctccagt cgctaaagtt
      121 tccaaacata ccgattctac taaacctctc tatagcgttc aggttatatc aaaatacgta
      181 agaacatatt ttttctacac caacttcctc atagatatcg acactccatt catatggtac
      241 aattgcatcc ttaagtggga catgaatcca aacagttgcc ccggcaacac gatctgtgcg
      301 tctcccattt cttgtgaaca acatcaatgc acagatattc gaacctcttc ttcttataac
      361 caatattctt cttcatgtcc tcccgcaacc aacagttcga tgacattacc tagttggtca
      421 ggttgcacat gccccgtgag tatagtggac cccgttaacg ggtcgtgtgc tgaagcactg
      481 ctgaattctg ctgagttatt tttcaatgaa ccttatatgt atggttttta ccctaatggt
      541 gcatgtgctc cttcttcttc atttgacaca tttctcgcaa atgttagtag tgtgatggct
      601 ttgtcatcaa acacttttct atcatatatt tctgacccat atccaagttt gtattctcta
      661 tgttttccta gttcagtctc taacactggg gtgttcttcc ttggaagtag ttcatattat
      721 ttttctccaa attcagatgt cgacgtaagg agttatctta cttatactcc gttactaaag
      781 tatccagatt cgtttggata cttcatcggt gtcaaaagca ttgtaataaa aaagagagct
      841 atcactgttt cagcgaatac cactacaaag ttgagtacac ttgagcctta cacctgtttt
      901 gattga
//
LOCUS       XM_071833081            1032 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842987), mRNA.
ACCESSION   XM_071833081
VERSION     XM_071833081.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1032
                     /gene="LOC139842987"
                     /note="uncharacterized LOC139842987; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842987"
     CDS             1..1032
                     /gene="LOC139842987"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689182.1"
                     /db_xref="GeneID:139842987"
                     /translation="MGLCAMRLRVIFNVHGVWEMIEPGTNLDAKENSVAMALFYQGIP
                     KEQIMQIGNLMTAKETCGVFKTRHLGVDRIREVQTLMGKFENLKMKDQEVVDLKTIGY
                     DDVVGRLKAYEERIKVEEIQTEKNQLLFASSDEKAKRKEYRCEDCGFVNSRREDFGRG
                     RGGGRGSERDRGDSRVQRDKSHVKCYKCNEFGHYISECSKWEKNDELNLNRIEEEEPA
                     LFLRNYRTGFLKQKFKNIMKPAFHLLVKISQSMVNLEVNFGGEFKPDVKTYSGGLKKQ
                     YCMAVCNLVLTNVLAFLKHDIPVVHKRVWLFKDSNLPTKVLEDDENWNAMFDRAMTHN
                     EKLWCISNS"
     misc_feature    547..600
                     /gene="LOC139842987"
                     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
                     /db_xref="CDD:395050"
ORIGIN      
        1 atgggactat gcgccatgag gttgcgggtt attttcaatg ttcatggagt gtgggagatg
       61 atagaaccgg ggacaaatct agatgccaag gagaatagtg ttgcaatggc tctattctat
      121 caaggtatac ccaaagagca aattatgcaa attgggaatc tcatgactgc gaaggaaact
      181 tgtggtgttt ttaaaacccg tcatttgggt gtggatcgaa tccgagaggt tcaaacttta
      241 atgggaaagt ttgaaaatct caaaatgaag gaccaagaag ttgtagactt gaagacaata
      301 ggttatgatg atgtggtggg tcgtcttaaa gcttatgaag aaaggatcaa ggttgaggag
      361 atccaaactg agaaaaatca gctcctgttt gcaagctctg atgaaaaagc aaaaagaaag
      421 gaatatagat gtgaagattg cggttttgtg aactcgaggc gtgaggactt tggacgtggc
      481 cgaggtggag gtcgggggtc cgagagagat cgaggagata gtcgagtaca aagggacaag
      541 agtcatgtaa aatgctataa gtgtaacgag tttggacatt acatatccga gtgttcgaag
      601 tgggagaaaa atgatgagct caatttgaac cggatcgagg aagaagaacc ggccttgttc
      661 cttcgaaatt acagaactgg atttttaaaa caaaaattta aaaacataat gaaaccggca
      721 tttcatttac tggtaaaaat aagtcagtcg atggttaact tagaggtaaa tttcggcggt
      781 gaatttaaac ccgatgtgaa gacctattct ggtggtttga agaaacagta ttgtatggcg
      841 gtgtgcaatt tggtgttaac caatgttctt gcatttttaa agcacgacat acctgttgtg
      901 cataaacggg tctggttatt caaagactcc aaccttccaa caaaagtgct tgaagatgat
      961 gaaaactgga atgctatgtt tgatcgagca atgacacaca atgaaaaatt atggtgtata
     1021 tcgaattcat ag
//
LOCUS       XM_071833082             510 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842988), mRNA.
ACCESSION   XM_071833082
VERSION     XM_071833082.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..510
                     /gene="LOC139842988"
                     /note="uncharacterized LOC139842988; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842988"
     CDS             1..510
                     /gene="LOC139842988"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689183.1"
                     /db_xref="GeneID:139842988"
                     /translation="MDVLEQGPWMVQNIPIILNKWSPDISLTKGDLTRVPVWVKLHDI
                     PLVGYTNDGLSLIASKVGKPMMSDSFTSSICVEAWGRPNFARALIEVSVESDLKDEIK
                     VATPSLDGHGRTTDLVHVEYEWKPPWCSCCKVYGHIDTQCPKVQPKVLEVEIKQKQVD
                     ADGFQEVIK"
     misc_feature    <7..267
                     /gene="LOC139842988"
                     /note="Domain of unknown function (DUF4283); Region:
                     DUF4283; pfam14111"
                     /db_xref="CDD:464086"
ORIGIN      
        1 atggatgtat tggagcaagg tccatggatg gtgcaaaata tacccataat tctcaataag
       61 tggtcaccgg atatatcttt aacaaaagga gatttaacaa gggtcccggt gtgggtaaaa
      121 ttgcatgaca tcccccttgt agggtatacg aatgatggtt tgagtcttat tgcttctaaa
      181 gttggtaagc caatgatgtc ggactcgttt acgagttcta tatgtgttga agcatgggga
      241 cgtcctaatt ttgcccgagc attgatagaa gtatcagtcg aatctgatct taaggatgaa
      301 attaaggttg ctactccctc tttggacggt catggccgaa ctactgactt ggtgcatgtg
      361 gaatatgaat ggaaacctcc atggtgttcg tgctgtaaag tttatggtca tatagatacc
      421 caatgcccaa aggttcaacc taaagtgttg gaagttgaaa ttaaacaaaa acaggtagat
      481 gcagatggtt ttcaagaggt gattaaatag
//
LOCUS       XM_071833083            1284 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139842990), mRNA.
ACCESSION   XM_071833083
VERSION     XM_071833083.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1284
                     /gene="LOC139842990"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139842990"
     CDS             1..1284
                     /gene="LOC139842990"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071689184.1"
                     /db_xref="GeneID:139842990"
                     /translation="MDFLALSIDLLFDSTSSEEEEEIQPRTRFQRQLRRFLNRDREVA
                     GQLLWNDYFCENPTFSDDIFKRRFRMRKVLFLRIKDGILQHSYTPNVPDHFTFFQQRP
                     DALGRLGFSTIQKITCALRQLSYGITADIFDEYIKMAEKTGYVTLNNFCKCIIDLYGR
                     EYLRKPNATDIARLYSVHEEKHGFKEMLGSIDCMHWAWKNCPVAWKGQYTRGDHGHPT
                     IMLEAVASYDMWIWHAFFGMSGSNNDINVLNHSPLFDSLRTDRAAPSPFEVNGNQYPF
                     GYYLADGIYPDWTTLIKGYTTPIEEPRKKFTKFQASARKDVERTFGVLQGRFTILKTP
                     ARVMSVNKMRRIMYSCIVIHNMIQEDNGFALSTWEQEWLDKPENRPRRNIRRRVKDRR
                     SREKEIRDRDVHDQLREDLTAHIWNLPPNFRSMHN"
     misc_feature    481..1086
                     /gene="LOC139842990"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggattttt tagccttaag tattgatttg ttattcgatt caacgtcgtc cgaagaagag
       61 gaagaaatcc aaccaagaac tcgttttcaa agacaactac gacgtttttt aaatagagat
      121 cgtgaagtag cgggtcaatt attgtggaac gattactttt gtgaaaatcc gacgttttcg
      181 gacgacattt tcaagagacg atttcggatg cgcaaagttt tatttctccg tatcaaagac
      241 ggtattcttc aacactctta tactcctaat gtcccagatc attttacttt tttccaacaa
      301 cgtccggatg cacttggacg tcttggtttc tcaactattc aaaaaataac ttgcgcgtta
      361 cggcaattgt cgtatgggat taccgcggat atatttgatg aatatattaa aatggcggaa
      421 aaaacgggtt atgttacttt aaataatttt tgcaagtgta taattgactt atatgggcga
      481 gaatatttga ggaagcctaa tgcaactgac attgctcggt tgtattcggt gcacgaggag
      541 aaacatggtt tcaaggaaat gttgggtagt attgactgta tgcattgggc atggaaaaat
      601 tgtcccgttg catggaaagg tcaatatacc agaggtgatc acggtcaccc gacgataatg
      661 cttgaagcgg ttgcttcata cgatatgtgg atatggcatg cgttttttgg gatgtcgggt
      721 tcaaacaatg acattaatgt gttaaatcat tctccgttgt ttgattccct tcgtacggat
      781 agagccgcac cttcaccgtt tgaagtaaac ggaaaccagt atccctttgg ttactacttg
      841 gcggacggga tatatcccga ttggacaaca ctaataaagg ggtatacgac tcctattgaa
      901 gagcctagaa aaaaatttac taaatttcaa gcgagtgcta gaaaggatgt tgagcgtaca
      961 tttggtgttt tacaaggtcg gtttacgatt ttaaaaacac cggcacgagt tatgagtgtt
     1021 aataagatga gaaggataat gtatagttgt attgttatcc acaacatgat acaagaagat
     1081 aacgggtttg cgttaagtac ttgggaacaa gaatggttag ataaacccga aaaccggcct
     1141 cgtcgcaata ttcggagaag ggtcaaagat cgtcgatccc gagagaaaga gattcgcgat
     1201 cgagacgtgc acgatcaact tcgtgaagat ttaacggctc atatttggaa cctcccgcca
     1261 aactttcgct cgatgcataa ctag
//
LOCUS       XM_071833084            2388 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 11-like (LOC139842991), mRNA.
ACCESSION   XM_071833084
VERSION     XM_071833084.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2388
                     /gene="LOC139842991"
                     /note="protein FAR1-RELATED SEQUENCE 11-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:139842991"
     CDS             1..2388
                     /gene="LOC139842991"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 11-like"
                     /protein_id="XP_071689185.1"
                     /db_xref="GeneID:139842991"
                     /translation="MIDLNEIPLEESPLDIEKDGCNIEEEGECKSLDLDEPFVGQCFL
                     SEEEAFVFYQNYAKRNGFAIRKGRFVNKNGEKSRRDFFCHREGKSKVKMVDYSKQQRN
                     RGSTVGECKAHMCISLRRINDIFPKEWQVTKFVLEHNHDLLSPQEVRFLPSYRSITSD
                     DEKRIFLLKEGGLSIRQIMRVMELEKSVRHGELDFLTKDVSNLIIKNHKLHSNNDARE
                     LLEYCKNAKTENSNFQYAFKLDADNRLEHIFWSHAHCFDMYQEYGDVVVFDTTYKVNS
                     YDMPFGIFVGVDNHGRTILFGCALLRDETTTTFEWLFKHDQMTQMARESPQTILTDQD
                     QWMTNAIAKEIPSAKHAFCIWHITTKFSSWFMSVLRSEYSSWCSEFYTLYKLDTVEEF
                     EQHWPLVIEKYNLSNNKHVVGLYKIKSFWVPAYLREFFFGGMTTTGRSESINAFIKKF
                     ISSRTCLSDFIKQVDLAVEDVHQKQIHDTMLQKYRGSYLRSLSPLEEQGYRFLTPFSF
                     KKFQEQFGLAMQYSVERNQYSSHEENTVAKCTCKNFEFVGILCRHILSVFIHEGCFEV
                     PSNYWHPRWRRKDTDVVAEWVYVLLLFLLQTIFHVKRKFSIAGEVNTIRIDLCPLCGF
                     CFGCHCTTPNRYSCGLTVMFLLPLWSLFLLYFGMSNHNPIIISDSETEGSVKRNPIII
                     SDSETEGSGNSPTYAPATPLASPVYVPTTPPAPPVYMPATPPYSPPAGESQIDADYDG
                     DDDEEEIMEEIIEEEESEPEKESEPTVVLAPSRKRKEPETPIVETPSPSKRLKHN"
     misc_feature    106..>1731
                     /gene="LOC139842991"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgattgatt tgaacgaaat acctttggag gaaagcccac tggatatcga aaaggatgga
       61 tgcaatattg aagaagaggg tgaatgcaaa agtctagatt tagatgagcc attcgtcggt
      121 caatgttttt taagtgaaga agaggctttt gttttttacc aaaactatgc taaaaggaat
      181 ggatttgcta ttcgtaaagg gaggtttgtg aacaagaatg gagaaaaatc aagaagagat
      241 ttcttttgtc atcgtgaagg aaaatcgaaa gttaaaatgg tagattactc aaaacaacaa
      301 agaaatcgtg gtagtacagt tggtgaatgc aaagcccata tgtgcatatc attgagaaga
      361 attaatgata tttttccaaa agagtggcaa gtcactaaat tcgttttgga gcataatcat
      421 gatttattgt ctcctcaaga ggttcgattt cttccttctt atcgtagtat tacatcggat
      481 gatgagaaac gtatattcct gttaaaggaa ggagggttgt ctattagaca aattatgcga
      541 gtgatggagc ttgaaaaaag tgtaaggcac ggagaacttg attttctaac gaaagatgtt
      601 agtaatttaa taatcaaaaa tcataagcta cactcaaata atgatgcaag agagcttttg
      661 gagtattgta aaaatgcaaa aactgaaaat tctaactttc aatatgcatt taaactagat
      721 gctgataata gactagagca cattttttgg tctcatgctc attgttttga tatgtatcaa
      781 gaatacggag acgttgtagt attcgatact acatacaaag tcaattcgta tgacatgcct
      841 tttggcatat ttgtgggtgt tgacaatcat ggaagaacca tcttatttgg ttgtgcactt
      901 ctacgagacg agacgaccac tacatttgaa tggttgttca agcatgatca gatgactcaa
      961 atggccagag agtcaccaca aacaattttg actgatcaag atcaatggat gacgaatgca
     1021 attgcaaaag aaataccttc ggctaagcat gcattttgta tatggcatat cactacaaaa
     1081 tttagtagtt ggtttatgtc ggtgttaaga agtgagtatt caagttggtg ttcagaattt
     1141 tatactttat ataagttaga cacggtcgaa gaattcgagc aacactggcc actggttatt
     1201 gaaaaatata atctttccaa caataagcat gttgtcggct tgtataagat aaagtcattt
     1261 tgggtacccg cttatcttcg agaattcttt tttggtggta tgacaactac tgggagatcc
     1321 gaaagtatta atgcgtttat aaaaaaattt atatcatcgc gtacatgtct aagtgacttt
     1381 attaaacaag ttgatcttgc agttgaagat gttcaccaaa aacaaataca tgatactatg
     1441 ctgcagaaat atagggggtc gtatttaaga tcactttcac cattggaaga acaaggttac
     1501 cgttttttaa ctccattttc ttttaaaaag tttcaagaac agtttggact cgcaatgcaa
     1561 tattcagttg aaagaaatca atattcaagt catgaagaaa acacggtggc taagtgcaca
     1621 tgcaaaaact ttgaatttgt tggcatactt tgtcgtcaca ttttaagtgt ctttatccac
     1681 gagggttgct ttgaagttcc gtctaattac tggcatccac gctggagacg aaaagatact
     1741 gatgtggtag cggagtgggt ttatgtgctg ctactctttc tattgcaaac gatttttcat
     1801 gttaaaagga agttttcgat tgcaggagag gttaatacca tcagaattga cctttgtccc
     1861 ttatgtggtt tttgttttgg ttgccattgt accactccta acaggtattc ctgtgggtta
     1921 acggtcatgt ttctgctgcc cttatggagt ctttttttgc tatattttgg gatgtctaac
     1981 cataatccga tcatcatctc tgactccgaa actgaaggat cagtcaaacg taatccgatc
     2041 atcatctctg attctgaaac tgaaggatca ggcaactcac caacttacgc acctgctact
     2101 ccacttgcat caccagttta tgttccgact acaccgcctg caccaccagt ctatatgccc
     2161 gctactccac catattcacc acctgctgga gaatcccaaa ttgatgctga ctatgatggg
     2221 gatgatgatg aagaagaaat catggaggaa atcattgaag aagaagaatc agaacccgag
     2281 aaggagtctg agcccactgt tgtcttagct ccctctcgga agaggaagga acctgagaca
     2341 cctattgttg aaacccctag tccctccaag agacttaaac acaactaa
//
LOCUS       XM_071833085            3103 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides formin-like protein 2
            (LOC139842993), mRNA.
ACCESSION   XM_071833085
VERSION     XM_071833085.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..3103
                     /gene="LOC139842993"
                     /note="formin-like protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     Proteins"
                     /db_xref="GeneID:139842993"
     CDS             8..2872
                     /gene="LOC139842993"
                     /codon_start=1
                     /product="formin-like protein 2"
                     /protein_id="XP_071689186.1"
                     /db_xref="GeneID:139842993"
                     /translation="MKTLILISIFTTFLLPPTTTTTTTVNRRTLHQPFFPLDSPTTPP
                     PPSDVPFTPSTTASPPENSPFFPELQAPPPPPRSTPSASFPANITSLDLPNSSKSKAV
                     SSKLITTAVTLVIAAVVVIAVVAYLKLRNQRRYDHDDSAVTDDKTHTSDNSSSRRVVV
                     INPNINININNNRNNNNNNNVASIPKLNRPSQTSAEFLYLGTLVNSQNLLNSNSNNND
                     TSRLNVIEKRSNVVVDANERKVDSPDLRPLPPLVTVVGGVGGRSQSSLKNSSFQNGEV
                     DSSKDEEFEEFYSPRGSIGTRSGSRSAFSSVPVETYESSTGIIGSGSSSCSSSSSGSP
                     VRSVSLSISPPVSLSPISRPKSPDLFAIQTAPPPPSRAAPPPPPPPPPPQPLVIPLAD
                     VRLSKDSVESSPRISEISNTSSDRYSVSPPMTRIPLPPPTPPPPPKHWESQSPKTPTP
                     QVRPPVLITPARPVPLMKDQPLVSPIEMLPENEENLETPRPKLKPLHWDKVRASSDRE
                     MVWDQLKSSSFKLNEEMIESLFIVKTPNSSNSNETPTTRRPILPSHTSHENRVLDPKK
                     SQNIAILLRALNVTIEEVCDALLEGNADNLGTELLESLLKMAPTKEEEQKLIEYNDND
                     DTPVKLGPAEKFLKAVLDVPFAFKRVEAMLYISNFDAEVEYLKRSFQTLEVACEELRN
                     SRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLIDVKGTDGKTTLLHFVVQEI
                     IKSEGARLSTTETNPDTSTSTSNSDTKFRKLGLQVVASISSELSNVKKAASMDSEVLN
                     SDVSKLSKGISNVTQVIKLNESRTKFTESMNKFMKMAEEELIRIQAQESVAFSLVKEI
                     TEYFHGNSAKEEAHPFRIFMVVRDFLTVLDRVCKEVGSINERIVISSSYNKFPVPVNP
                     MFPVPVNPTLPPVFSGFGLKRQYSSSDDESNSSFSSSFRL"
     misc_feature    1460..2665
                     /gene="LOC139842993"
                     /note="Formin Homology 2 Domain; Region: FH2; pfam02181"
                     /db_xref="CDD:396655"
ORIGIN      
        1 ccccaatatg aaaaccctaa ttctcatttc aattttcacc acatttttac taccaccaac
       61 caccaccacc accaccaccg tcaaccgccg tacactccac caaccatttt tcccactaga
      121 ctcccccacc acacctccac caccttccga cgttccattc acaccttcca ccaccgcatc
      181 tccgccggaa aacagtccat tcttcccgga acttcaagct ccaccgccgc cgccacgatc
      241 aactccgtca gcttcatttc cagctaacat tacctcactt gatcttccaa attcttcaaa
      301 atcaaaagcg gtttcctcca agctcataac aacagctgtc acacttgtga ttgctgctgt
      361 tgttgttatt gcagttgttg cttatttgaa attgaggaat caaaggaggt acgatcatga
      421 tgattctgct gttactgatg ataaaactca tacatctgat aacagtagta gtagaagagt
      481 agttgttatt aatcctaata ttaatattaa tataaataat aatcgtaaca ataataataa
      541 taataatgtt gctagtatac ctaagttaaa tcgtccatca caaactagtg ctgaattttt
      601 atatttaggt acactagtta attcacaaaa tctgcttaat agtaatagta ataataatga
      661 tacttcgcgt ttgaatgtaa ttgaaaaacg gagtaatgtt gttgttgatg cgaacgaacg
      721 aaaagtagat tcacctgatc tccgcccgtt gcccccgctt gtgacggttg tcggtggtgt
      781 cggtgggcgg agccagagta gtcttaagaa cagtagtttt caaaatgggg aagttgattc
      841 ttctaaagat gaggaatttg aagagtttta ttcgcctcga ggttcgattg ggacccgatc
      901 cggttctaga tcggcttttt cttctgtccc ggtggaaact tatgaatctt ccacggggat
      961 aattgggtcg ggttcttcgt cttgttcatc gtcaagttcg ggttcaccgg ttaggtctgt
     1021 ttcgttaagt atttcgcctc cggttagttt gagtccgata tcacggccga agtcgccaga
     1081 tctttttgcg attcagactg ctcctccacc gccatcccgt gcagctcctc caccgccacc
     1141 gccaccgccg ccacctcagc ctctagtaat tccgttagcg gatgttagat taagtaaaga
     1201 tagtgtcgag tcttcacccc gaatatcaga gatatcgaat acgtcaagtg atcgatattc
     1261 ggtttcacct cccatgacga ggattcccct accaccacca acgcctccac cgccacctaa
     1321 gcattgggaa tctcaaagtc cgaaaactcc aacacctcaa gttcggccgc cagttttaat
     1381 tacacctgca aggccagtac ctttaatgaa agatcaacca ttggtttctc cgattgaaat
     1441 gttgccggaa aatgaagaaa atcttgaaac cccgagaccg aagttaaaac cacttcattg
     1501 ggataaagta agggcaagtt ctgatcgtga gatggtgtgg gatcaactca aatcgagctc
     1561 gttcaagtta aatgaagaaa tgatcgagtc tttatttatc gtaaaaacac caaattcaag
     1621 taactcaaac gaaacaccta ccacaaggcg tccaattctg ccgtcacaca ccagccatga
     1681 aaaccgagtt cttgatccga aaaagtcgca aaacattgca attttgctta gggcacttaa
     1741 tgtgacaatt gaagaagttt gtgatgcact tttagaaggc aatgctgata atcttggaac
     1801 tgaactactc gagagtttat taaaaatggc accaactaaa gaagaggaac agaagttgat
     1861 cgagtataat gataatgacg atactcctgt aaagcttggg cccgctgaga agtttctaaa
     1921 agcggtcctt gatgtaccgt ttgcatttaa aagagttgag gcaatgcttt acatatctaa
     1981 ttttgacgcc gaggttgagt acctgaaacg ctcatttcaa actcttgagg tagcatgtga
     2041 agagcttaga aatagtcgaa tgttcctaaa acttcttgag gccgttctta aaactggaaa
     2101 ccgcatgaat gttggaacaa accgagggga tgctcatgca ttcaaactcg acacacttct
     2161 caaactcatt gatgttaaag gcaccgatgg aaaaacgacc cttttacatt ttgtcgttca
     2221 agaaattatc aaaagtgaag gggcccgtct ttcaacaacc gaaaccaatc ccgacacttc
     2281 aacctcaact agcaatagtg acaccaagtt tcgcaaactt ggtcttcaag tagtcgctag
     2341 tattagttcc gaactctcga atgtcaaaaa agccgcatcc atggattccg aggttcttaa
     2401 tagtgatgtc agtaaattgt caaagggtat ttcaaacgtt acacaagtta ttaaattaaa
     2461 cgaaagtcga acaaaattta ccgagtcgat gaacaagttt atgaagatgg ccgaagagga
     2521 acttattcga attcaagctc aagaaagcgt tgcgttttcg ttagttaaag aaataactga
     2581 atatttccat ggaaattcgg ctaaagaaga agcgcacccg tttaggatat ttatggttgt
     2641 gagagatttt ttaacggtac ttgatcgtgt ttgcaaagag gttggttcaa taaacgagcg
     2701 aattgtgatc agttcgtctt ataataagtt tccagttcct gtaaacccaa tgtttccggt
     2761 tccagtaaac ccaacgttgc ctccggtttt tagtgggttt ggtctgaaac gacagtatag
     2821 ttcttcggac gatgaaagta attcttcatt cagttcttca tttcgactgt agggatgggc
     2881 attttcgtgt ttgtaatgtt gtatttgtat acacaagtgt agaagttttt gaatatttaa
     2941 tcggttatat atatagatat ataaaattat atagataata tatatatgat atacagagaa
     3001 gattttggaa gaataagcat atctctgtaa aaaaaaacaa gcttcatatc tactagttgt
     3061 tccttggaat tagattcttt gcaactacaa ttcatgtgta aaa
//
LOCUS       XM_071833086             864 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842994), mRNA.
ACCESSION   XM_071833086
VERSION     XM_071833086.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..864
                     /gene="LOC139842994"
                     /note="uncharacterized LOC139842994; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842994"
     CDS             1..864
                     /gene="LOC139842994"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689187.1"
                     /db_xref="GeneID:139842994"
                     /translation="MTDIIEFLCTGSLPDDEKEAMKIRVKAPNYELIGEILYRKSYLG
                     ASLRCVGPKEAAVIIDEIHKGSCGLHSGSRTVTERIKRLGYYWPRMQPFRSWCQDLNI
                     KHRFTSVAHPQANGQCEVTNRDIVHAIKERLGMKRSGWVELPKVLWAHRTTHKRSTGE
                     TLFSLVYGSEAVIPVEITVPTERILSYSEGKNDEKLRTNLNYTEERREMAVIREAANK
                     QRIAKYYDKRVRARTYKVGDLVWRDNRASRAQNTGKLGPNWEGPYRVIGISNTGAYKL
                     AELKGNPIKRT"
     misc_feature    <265..375
                     /gene="LOC139842994"
                     /note="IS481 family transposase; Region: transpos_IS481;
                     NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 atgacagaca ttatagaatt cctgtgcact ggatccctac ctgatgatga gaaggaagca
       61 atgaagatta gagtgaaagc gccaaattat gaactgatag gagaaatcct atatcgaaaa
      121 tcttatttgg gcgcatcact acgctgcgta ggacctaaag aagccgctgt gatcatcgat
      181 gagattcaca agggatcgtg cgggttacat tctggatcaa ggacggttac tgagaggatc
      241 aagcgactag ggtactattg gccccgaatg caaccctttc gcagctggtg tcaggatttg
      301 aacatcaaac atcgctttac ctctgtcgcg caccctcagg ctaatggcca atgtgaggtc
      361 acgaataggg atattgtgca cgccattaag gaaagattag gaatgaagcg cagtggatgg
      421 gttgaattac ctaaagtcct atgggcgcac agaacaacac acaagaggag cacaggagaa
      481 acactgttca gtttagtgta cggttcggaa gcggtaatcc cggttgaaat aaccgtccca
      541 acagaaagga ttctgtccta cagcgaagga aaaaatgacg aaaagttgcg caccaatctg
      601 aattatacgg aggagcgcag ggaaatggcg gtgatccgcg aagccgccaa taagcagcgc
      661 atagcaaaat attacgataa gcgcgtgcga gcaaggacat acaaggtagg agatcttgta
      721 tggcgtgaca accgggcgag tagagcccaa aacacaggaa agttagggcc aaattgggag
      781 ggaccttaca gggtcattgg aatcagtaac actggagctt acaaactggc agagcttaag
      841 ggcaatccaa tcaagcggac ctag
//
LOCUS       XM_071833087             423 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842995), mRNA.
ACCESSION   XM_071833087
VERSION     XM_071833087.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..423
                     /gene="LOC139842995"
                     /note="uncharacterized LOC139842995; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139842995"
     CDS             1..423
                     /gene="LOC139842995"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689188.1"
                     /db_xref="GeneID:139842995"
                     /translation="MADYLAETAANMPVICNPEQLPTPPIELWELYTDGVASSEGAGA
                     GLILTGPHQEEHTYALRFNFKVTNNEAEYEALLAGMRIARELGVKRLQAYVDSQLVTN
                     QINGTFDANDKSMQSNLALVHSLADTFIDFKISQIPGS"
     misc_feature    85..414
                     /gene="LOC139842995"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; Region:
                     RNase_HI_like; cd09279"
                     /db_xref="CDD:260011"
     misc_feature    order(100..105,112..117,199..207,214..216,286..288,
                     406..408)
                     /gene="LOC139842995"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260011"
ORIGIN      
        1 atggccgatt atttggccga aacggccgct aatatgccgg taatttgtaa ccctgagcaa
       61 cttcccacgc cccctatcga actgtgggag ctctataccg acggcgtagc aagctctgag
      121 ggcgctggcg cagggttaat cctcacaggt ccacatcagg aagagcatac ttacgcgttg
      181 cgattcaact ttaaggtgac aaacaatgag gcagagtacg aagcgctatt ggcagggatg
      241 cgtatagccc gagaattagg agtaaaaagg ctacaagcct atgtggattc acagctggtc
      301 actaatcaga taaatggcac gttcgatgcc aatgacaagt ccatgcaatc aaacttggct
      361 ctggtccatt ctctggcaga tacgtttatc gacttcaaaa tcagtcaaat ccccgggagt
      421 taa
//
LOCUS       XM_071833088             729 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842996), mRNA.
ACCESSION   XM_071833088
VERSION     XM_071833088.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..729
                     /gene="LOC139842996"
                     /note="uncharacterized LOC139842996; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842996"
     CDS             1..729
                     /gene="LOC139842996"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689189.1"
                     /db_xref="GeneID:139842996"
                     /translation="MTVEEARNDNDIITGTFLVNNCYASVLFDTGADRSYVSIEFCTL
                     FDEKPQTLDTKCLVEMANGKFVKVDRIYKECNLTLANKTFKVDLMPVELGSFDVVLGM
                     DWLSPMKVGIQCFDKTINIPLETGEILVIQGDKGGSKLNLISCIKTRKYLMKGCQAIL
                     AHIKEVKPDERNIEDVPVVKDFPELKTVQFLRHVVDSNGIHVDPAKITAIQNWETPKN
                     AKHIRICFSDPERKVDYRTNLITT"
     misc_feature    1..357
                     /gene="LOC139842996"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(85..87,91..93,97..99,172..180,295..297)
                     /gene="LOC139842996"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..93
                     /gene="LOC139842996"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    85..87
                     /gene="LOC139842996"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(172..183,193..204)
                     /gene="LOC139842996"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaccgttg aagaagctag gaacgataat gacatcatca ctggtacgtt tcttgtcaac
       61 aactgctatg cttctgtttt atttgatact ggtgctgata gaagctatgt gtctattgaa
      121 ttctgtacct tatttgacga gaaacctcaa accttagaca ctaagtgtct tgtagaaatg
      181 gctaacggga aatttgtaaa agttgaccga atctacaagg aatgtaatct gactctagcc
      241 aataaaacct tcaaggttga cttaatgcct gttgaactag gaagctttga tgtagtctta
      301 gggatggatt ggttatcccc gatgaaagtg ggtatccaat gttttgataa gacaattaat
      361 attcctctcg aaactggtga aattcttgtc atccaaggag acaagggtgg ttccaaactt
      421 aatcttatct catgcatcaa aacccgaaag taccttatga aaggatgtca agccattttg
      481 gctcacataa aagaagtcaa gccagatgaa cggaatattg aagacgttcc cgttgttaaa
      541 gactttcctg aattgaagac tgttcagttt ttgagacatg tagttgacag taatgggata
      601 catgttgacc ccgcaaagat cacggctatt cagaactggg aaacacctaa gaacgcgaaa
      661 cacattcgaa tatgcttttc agaccctgaa agaaaagttg actaccgcac taatcttatc
      721 actacctga
//
LOCUS       XM_071833089             519 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842997), mRNA.
ACCESSION   XM_071833089
VERSION     XM_071833089.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..519
                     /gene="LOC139842997"
                     /note="uncharacterized LOC139842997; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139842997"
     CDS             1..519
                     /gene="LOC139842997"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689190.1"
                     /db_xref="GeneID:139842997"
                     /translation="MSADKVYRDCILTLAGMSFKIDVIPIKLGSFDLVVGMDWLAKNK
                     ADIVCHQKAIRIPVAEGKPLMVYGERNNMPLHFINCLEVQKHMRKGCLAMLVHVSKTE
                     SEGKRLEDVPIVREFPDVFPDELPGLPPPRDVEFQIDLVPGAAPVARAPLNICVKRLY
                     EASDMIERSFGA"
     misc_feature    <1..162
                     /gene="LOC139842997"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
ORIGIN      
        1 atgagtgctg ataaggttta ccgtgattgt attttgactt tggctggaat gtcatttaag
       61 atagatgtta taccaattaa gctgggaagt ttcgaccttg tggttggaat ggactggtta
      121 gccaagaaca aagccgacat tgtttgtcat cagaaagcga ttcgcattcc tgttgctgaa
      181 ggtaaacctt taatggtgta tggagagcga aacaatatgc cgttacattt cattaattgt
      241 ttggaggtgc agaaacacat gagaaaaggt tgtcttgcta tgctggttca cgtaagcaaa
      301 actgaatcgg aaggtaagag acttgaagat gtgcccattg ttagagaatt tcccgatgtt
      361 tttccagatg agttacccgg attacctccg cctagagatg tagaattcca gattgattta
      421 gttcccggag cggcacctgt agcgcgtgca ccactaaata tttgcgttaa aaggttgtat
      481 gaagcttccg atatgatcga acgaagtttt ggtgcgtaa
//
LOCUS       XM_071833090            1446 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842998), mRNA.
ACCESSION   XM_071833090
VERSION     XM_071833090.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1446
                     /gene="LOC139842998"
                     /note="uncharacterized LOC139842998; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139842998"
     CDS             1..1446
                     /gene="LOC139842998"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689191.1"
                     /db_xref="GeneID:139842998"
                     /translation="MKKPIVGEKYLNAKQFKDCLTYYALANGFSLWYYRSCENDMIAK
                     CGQRAPRVKQPTESKKRKFHRYPSVVKGEEAKCPWRCYGRMMKDDASFQVISMNDEHT
                     CVRSFRFGSLINYKWIGREFGDKIRVNPNIRLVDIADLVLKKYKCTVTSDQCRRAKTW
                     ALTEYEKSIEEHYGLLRSYADELVKSNPGSTVKLGVTQNPDGKVYFDRFYVCIHGLKE
                     GWKNGCRKIIALDGCFLKKPNQGELLTAIGRDGNNHIYPVAWTVVSVENKENWTWFLE
                     LIEADLEVECVVGLTLMSDQHKGLIEAVKDIMPHAEHRQCARHIYENFRKQYSGVEFR
                     NLFWEASKASYPILFDATMDRIKATNPGAFKYLINRIPKTWSRAFFEVDRGCEAVENG
                     FSECFNYVIVTCRHKPIITMLETIRVIVMERMTVMRRLSENWVGDISPNIKRRLEIIK
                     DQHRYWQAYFSGGFEYEVRHKSEAFKVNEER"
     misc_feature    679..969
                     /gene="LOC139842998"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
     misc_feature    <733..1374
                     /gene="LOC139842998"
                     /note="Transposase, Mutator family; Region:
                     Transposase_mut; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 atgaagaagc caatagtggg tgagaaatat ttaaatgcta aacagtttaa ggattgttta
       61 acatattatg cccttgcaaa tggtttctca ctatggtatt atagaagttg tgaaaatgat
      121 atgattgcaa agtgtgggca gagagcacct agagtgaaac aaccaactga atctaaaaaa
      181 aggaagtttc atagatatcc aagtgtagtt aagggtgaag aagcaaaatg cccatggaga
      241 tgttatggaa gaatgatgaa ggatgatgct tcttttcagg ttatatccat gaatgatgaa
      301 cacacttgtg ttagaagttt taggtttgga agtttgataa actacaaatg gattggtaga
      361 gagtttggtg acaaaattag agtaaaccca aatattaggc tagtagacat tgcagactta
      421 gttttgaaga agtataagtg tactgtaact tctgatcagt gtagaagggc taagacttgg
      481 gctttaactg aatatgagaa aagtattgag gaacattatg gtttgttaag gtcttatgct
      541 gatgaacttg taaaaagcaa cccagggtca actgttaaat taggagtaac tcaaaaccct
      601 gatgggaaag tatattttga cagattttat gtttgtatac atggattgaa agagggatgg
      661 aagaatgggt gtagaaagat aatagcttta gatggatgct ttttaaagaa acctaatcaa
      721 ggggagctat taactgcaat aggaagggat gggaataatc acatataccc tgttgcctgg
      781 acagttgtta gtgtggaaaa caaggaaaac tggacctggt ttcttgagct aattgaagct
      841 gatttggaag tagaatgtgt tgttggtctc acacttatgt ctgatcaaca taagggttta
      901 attgaagctg tgaaggacat aatgccacat gctgagcata ggcaatgtgc tagacatatt
      961 tatgagaatt ttaggaagca atacagtgga gttgagttta gaaacctgtt ttgggaagca
     1021 tctaaagcat catatcctat tttatttgat gcaacaatgg atagaataaa ggctactaac
     1081 cctggtgcat tcaaatactt gattaataga attccaaaaa cttggtcaag ggcctttttt
     1141 gaagtagaca ggggttgtga agcagtagaa aatggtttta gtgagtgttt taattatgtg
     1201 attgtaacat gtagacataa gcccatcata acaatgttag aaacaattag ggtaattgtt
     1261 atggagagaa tgactgttat gagaaggctt tctgagaatt gggtaggtga tatttctcca
     1321 aatatcaaga gaagacttga aattattaaa gatcaacaca gatactggca agcctatttt
     1381 tcaggtggct ttgagtatga ggttagacac aagagtgaag cttttaaagt taatgaagaa
     1441 agataa
//
LOCUS       XM_071833091             354 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139842999), mRNA.
ACCESSION   XM_071833091
VERSION     XM_071833091.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..354
                     /gene="LOC139842999"
                     /note="uncharacterized LOC139842999; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139842999"
     CDS             1..354
                     /gene="LOC139842999"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689192.1"
                     /db_xref="GeneID:139842999"
                     /translation="MANYRSNSYNHTDKDMQLDTYSGGFQPNFRSYSVSYKTHESNMD
                     IVVAGSNTKDFKLKKGKSTNGSASKTWGFSDPEFQRKKRVAGYKVYSVEGKFKGSFRK
                     SFRWIKDKCTNVFYG"
     misc_feature    217..351
                     /gene="LOC139842999"
                     /note="Domain of unknown function (DUF3511); Region:
                     DUF3511; pfam12023"
                     /db_xref="CDD:463435"
ORIGIN      
        1 atggccaatt acagatcaaa ttcatacaat cacaccgata aagacatgca attggataca
       61 tacagtggtg gatttcaacc caatttcaga tcttatagtg tttcttacaa aacccatgaa
      121 tcaaacatgg atattgttgt tgctggatca aatactaaag attttaagct gaaaaaagga
      181 aagtcaacaa atgggtcagc ttcaaaaaca tggggcttta gtgatcctga gtttcaaagg
      241 aagaaaagag ttgcaggtta taaagtttat tctgttgaag gcaagtttaa agggtctttt
      301 aggaagagct ttaggtggat taaagataag tgtacaaatg ttttttatgg atag
//
LOCUS       XM_071833092            1057 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative methyltransferase
            At1g22800, mitochondrial (LOC139843001), mRNA.
ACCESSION   XM_071833092
VERSION     XM_071833092.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1057
                     /gene="LOC139843001"
                     /note="putative methyltransferase At1g22800,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:139843001"
     CDS             1..1026
                     /gene="LOC139843001"
                     /codon_start=1
                     /product="putative methyltransferase At1g22800,
                     mitochondrial"
                     /protein_id="XP_071689193.1"
                     /db_xref="GeneID:139843001"
                     /translation="MNCSRKLNGTLVSLRSNFTRKTRSYCTGDGYDNVESSKVLIFDR
                     HLKRKQRDRAAWLINRKDSLVNTVADNLLDRLEDVKKTFPTTLCLGGSLEAIRRSLRG
                     RGGIEKLIMMDSSDEMVKLCKDAEKDFASDNIETSFLVGDEEFLPIKENSVDLVLSCL
                     SLHWTNDLPGAMIQSRLALKPDGLFLGAIFGGETLKELRIACTIAHMEREGGVSPRIS
                     PLAQVRDAGNLLTRAGFTLPGVDVDEYQVRYNSALELIEHLRAMGETNALVNRVKFLK
                     RDTALATAAVYESMFAAEDGTIPATFQVIYMTGWKEHESQQKAKRRGSATVSFKDIQK
                     EFGGQTS"
     misc_feature    202..933
                     /gene="LOC139843001"
                     /note="malonyl-acyl carrier protein O-methyltransferase
                     BioC; Region: BioC; TIGR02072"
                     /db_xref="CDD:273953"
ORIGIN      
        1 atgaactgta gtagaaagct aaatggaacc ctagtttcat tacgaagcaa ttttacgaga
       61 aaaacacgat catattgcac tggggacgga tatgacaatg ttgagagctc taaagttcta
      121 atctttgatc gccatctcaa acgcaaacaa cgtgatcggg ccgcatggtt gataaatcgg
      181 aaagattcgt tggtcaatac tgtggcagat aaccttcttg atcgcttaga ggatgtcaag
      241 aagacatttc ctactacgtt atgtttgggt ggttccttgg aagcaattag gcgttcgtta
      301 cgtgggcgtg gtggcataga aaaactaatt atgatggatt catcagacga gatggtgaag
      361 ttgtgtaaag atgctgaaaa agattttgct agcgataata ttgaaacttc ttttttggtt
      421 ggcgatgaag aatttctacc tataaaagaa aattctgttg atttagtttt aagttgcttg
      481 agccttcact ggactaatga tcttcctgga gcaatgatac agagtaggtt ggcattgaaa
      541 ccagatggct tgtttttggg ggcaattttt ggcggagaaa cactaaaaga gttgagaatt
      601 gcttgcacta tagcacacat ggagcgtgag ggtggtgtga gtccacgaat atcaccatta
      661 gcacaagtgc gagatgcggg aaatctgttg actagggccg gtttcactct tccgggggtc
      721 gatgttgatg aatatcaggt tagatataat agtgctctgg agctaataga acatttgcgg
      781 gcaatgggtg aaactaatgc tcttgtaaac agagtcaaat tcttgaaaag ggacacagca
      841 ctagccacag cagctgttta cgagtcgatg tttgcagcag aagatggcac catccctgca
      901 acttttcagg tgatatacat gactgggtgg aaggaacatg agtctcagca gaaggctaaa
      961 cgacgtggat ctgctactgt atctttcaaa gacatccaga aggaatttgg gggtcaaact
     1021 tcatgaaaaa catcaggttc gtgtaacaat aaatggg
//
LOCUS       XM_071833094            1077 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843004), mRNA.
ACCESSION   XM_071833094
VERSION     XM_071833094.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1077
                     /gene="LOC139843004"
                     /note="uncharacterized LOC139843004; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139843004"
     CDS             1..1077
                     /gene="LOC139843004"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689195.1"
                     /db_xref="GeneID:139843004"
                     /translation="MTRRQKLLATKKVINMNLKVHKARETCLNKGLSKELKKLQDVRK
                     VSTIHKKKVFKKQKAVEVFEKWQFAPITFPFAQNRKMNDMPLVISCKIANTGITIMKI
                     HVDTGSSIDLIYEQCFRQLPECIKEDLKPTAISLSGFAGESAWPMGQLSLEIELCDEI
                     EMKLTRKMQLDFYVIRAASRYNMLLGRSALRKLGIVPSTIHGMVKFTTCKEHRLNANL
                     ALKPIVQKRRGMAPDRMKWLSAEVAKLVNAGILSEVKYQTWVANPVLVKKPDGSWRMC
                     IDFKDINKAYPKDNYPLPEINLKVETLHAYPYKCFLDAAKGYHQIPMALEDEDKTAFL
                     LEKAFIVILKCLLALKMWEQLIGD"
     misc_feature    262..561
                     /gene="LOC139843004"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(313..315,319..321,325..327,406..414,550..552)
                     /gene="LOC139843004"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    313..321
                     /gene="LOC139843004"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    313..315
                     /gene="LOC139843004"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(406..417,427..438)
                     /gene="LOC139843004"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     misc_feature    745..>999
                     /gene="LOC139843004"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; Region: RT_LTR;
                     cd01647"
                     /db_xref="CDD:238825"
ORIGIN      
        1 atgacgaggc gacaaaagct tttggctact aagaaagtta taaatatgaa tttgaaggtg
       61 cataaagcac gcgaaacctg tttaaacaaa ggtttgtcaa aagaactgaa aaaattgcaa
      121 gatgtgagaa aagtaagcac aatacacaag aaaaaagtat tcaaaaagca aaaagcagta
      181 gaagtgtttg aaaaatggca attcgcgcct attacatttc catttgcaca aaatcgcaaa
      241 atgaatgaca tgccactagt catatcgtgt aaaatcgcaa atacggggat cacaattatg
      301 aaaatacatg ttgatactgg tagtagtata gatttgatat acgagcaatg ctttcgtcaa
      361 ctaccagaat gtatcaaaga agatctaaag ccaaccgcga tatctttatc tggtttcgcg
      421 ggtgaatccg cttggcccat ggggcaatta tcattagaaa ttgaattgtg cgacgaaata
      481 gagatgaagt tgacaaggaa aatgcagtta gatttctatg ttatacgcgc tgcctctcgt
      541 tataacatgt tattgggaag atctgcgttg cgaaagcttg gaatagtgcc atctacaata
      601 cacggaatgg ttaaattcac tacttgcaaa gaacatagat taaatgctaa tctggcgtta
      661 aagcctattg tgcaaaagcg taggggaatg gctccagatc gcatgaagtg gttatctgcg
      721 gaagttgcta aattagttaa tgcaggaata ttgagcgaag taaaatatca aacatgggtt
      781 gcgaaccctg ttttggtgaa aaaacctgat gggtcgtgga gaatgtgtat agacttcaaa
      841 gacataaaca aagcttatcc aaaagataat tatccacttc ctgaaattaa tcttaaagtg
      901 gaaactttgc acgcctatcc ttacaagtgt tttttagatg ctgcaaaagg ataccatcag
      961 ataccaatgg cgttggaaga tgaagataaa accgcgttcc tactagaaaa ggcatttatt
     1021 gttatattaa aatgcctttt ggccttaaaa atgtgggagc aacttatcgg cgattaa
//
LOCUS       XM_071833095             735 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139843005), mRNA.
ACCESSION   XM_071833095
VERSION     XM_071833095.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..735
                     /gene="LOC139843005"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139843005"
     CDS             1..735
                     /gene="LOC139843005"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071689196.1"
                     /db_xref="GeneID:139843005"
                     /translation="MSYVYQDISGVTSVSRTASGMFLSKKKYATEIIEREDIGNCNPS
                     RTPVGISTKLTASGPPIKDPTLYRSLAGALQYLTFTRPDISYAVQHIFLFIHDPREPH
                     LAALRRIIRYIQGTLDLGLQLLASSSTSLVAYSDADWAGCPSTRRSTSGYCVFLGDNL
                     LSWSSKRQQTPSRSSSEAEYRGVANAVAKTCWRRNLLRTGSCASCSSRYQYADIFTKG
                     LPTALFDEFRSSLSIRPAPTPTAGRC"
     misc_feature    394..>594
                     /gene="LOC139843005"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgagttatg tttatcagga tatttcgggt gttacatctg tttctcgcac tgcttctggg
       61 atgttcctct ctaagaagaa atatgctact gagattattg agcgggagga cattggtaac
      121 tgtaacccta gcaggacacc agttggcatt agcaccaaac tcactgcttc tggtcctccg
      181 attaaggatc ccacattata tcgcagtctt gctggtgctc ttcagtatct tactttcact
      241 cgaccagata tttcgtatgc ggttcaacat atctttttat ttatacatga tcctcgagag
      301 cctcacctag cggctctgag gcggattata cggtacattc agggcactct agatcttgga
      361 cttcagttgt tagcatcctc ttccacctcc ttggttgcat attcagatgc cgactgggca
      421 gggtgtccgt ccactcgtcg ttccacctct gggtattgtg tgtttttagg tgataatctg
      481 ttgtcttggt cttctaagcg gcaacagact ccatctcgtt ccagttccga ggctgagtat
      541 cgcggcgttg ccaacgccgt tgccaagacg tgttggcgtc gtaatctcct tcggacaggt
      601 tcgtgtgctt catgttcctc tcgatatcag tatgcagaca tcttcaccaa aggcctcccg
      661 acggctctgt ttgacgagtt ccgatccagt ttgagtattc gccctgctcc cactccaact
      721 gcagggcgat gttag
//
LOCUS       XM_071833096             525 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cullin-1-like
            (LOC139843009), mRNA.
ACCESSION   XM_071833096
VERSION     XM_071833096.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..525
                     /gene="LOC139843009"
                     /note="cullin-1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139843009"
     CDS             1..525
                     /gene="LOC139843009"
                     /codon_start=1
                     /product="cullin-1-like"
                     /protein_id="XP_071689197.1"
                     /db_xref="GeneID:139843009"
                     /translation="MHRKHPLKIDNEPKTQFELIAFSQFFVGLRRKKLSRRLLFDKSS
                     NDDHERVILSKLKQQCIGKFTSKMEGMVTDLALANENQSRFNDCLFNNSCASPGIDLT
                     VNVLTMGFWPTYKSYDLCLPQEMIKFVKVFKEFYQTITKHRTLTWIYSLGTCNVNGKF
                     DQKSIELILVTYQC"
     misc_feature    <91..519
                     /gene="LOC139843009"
                     /note="Cullin family; Region: Cullin; pfam00888"
                     /db_xref="CDD:459983"
ORIGIN      
        1 atgcatagga agcatccgtt gaaaattgat aatgaaccta aaacacagtt cgagttgatt
       61 gcattttctc aattttttgt aggtttaagg aggaaaaaac tttctcggcg tttacttttt
      121 gataagagtt caaacgacga tcatgagagg gttattcttt caaagttgaa gcaacaatgc
      181 attgggaagt tcacttcaaa gatggagggc atggtaacgg atttggcgtt ggcaaatgaa
      241 aatcagagtc ggtttaatga ttgccttttt aataattctt gtgccagccc cgggattgat
      301 ttgacagtaa atgttttgac tatgggattc tggcccactt ataaatccta tgatctttgc
      361 ctacctcaag aaatgatcaa atttgttaaa gttttcaagg aattctatca gacaataacc
      421 aagcaccgaa cgcttacttg gatctactct ctagggacgt gcaatgttaa tggtaaattt
      481 gatcagaaat ccatcgagtt gattttggta acctatcagt gctga
//
LOCUS       XM_071833098             807 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843010), mRNA.
ACCESSION   XM_071833098
VERSION     XM_071833098.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..807
                     /gene="LOC139843010"
                     /note="uncharacterized LOC139843010; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139843010"
     CDS             1..807
                     /gene="LOC139843010"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689199.1"
                     /db_xref="GeneID:139843010"
                     /translation="MKVQFGPSSYEDPIEALTRLTQKGIVQDYQLEFQTLCCKTRELS
                     DKVLKSCFIACLKPEIRREVKSKMPFSLSQTIGLAKMYEAKLTDKLQNSWQYRNQETE
                     RARKDARGECYNCEEKWSRTHKCGAKENLHVLDVEDDEELEDLENGELLEETAHDTPC
                     KQPVISLHALWGHANPKVLRMEGSIGNKKIQLMIDSGSSHNFIQEKMVKYLNLALHLT
                     DHFNVMVGNGQSLKCLGKCVKVLINIQDYKFEADFFVIDLHGADAILSLA"
     misc_feature    541..795
                     /gene="LOC139843010"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     Region: retropepsin_like; cd00303"
                     /db_xref="CDD:133136"
     misc_feature    order(583..585,589..591,595..597,667..675,790..792)
                     /gene="LOC139843010"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     misc_feature    583..591
                     /gene="LOC139843010"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     misc_feature    583..585
                     /gene="LOC139843010"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     misc_feature    order(667..678,688..699)
                     /gene="LOC139843010"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
ORIGIN      
        1 atgaaggtgc agtttggacc gtcatcttat gaagatccaa ttgaagcact cacaagatta
       61 actcagaaag gaatagttca agattaccaa ttagagttcc aaactttatg ttgcaagact
      121 agagagttat cagacaaggt gttaaaaagt tgtttcatag catgtttaaa acctgaaatt
      181 agaagagaag ttaagtccaa aatgccattc tcattgagtc aaactattgg actagctaaa
      241 atgtatgaag caaagttgac tgataaacta caaaattctt ggcagtatag gaatcaagaa
      301 acagaaagag ctagaaaaga tgccaggggt gaatgttata actgtgaaga aaaatggagt
      361 cgaactcata aatgtggtgc aaaagaaaac ttacatgtct tagatgtaga agatgatgag
      421 gagttggagg atcttgaaaa tggtgagctt ttagaagaaa ctgctcatga cactccttgt
      481 aaacaacctg tgatcagttt acatgcacta tggggtcatg ctaatcctaa agtcctaaga
      541 atggaaggtt ctattggcaa caaaaagata cagcttatga tagacagtgg tagcagtcac
      601 aacttcattc aagagaaaat ggtaaaatac ctaaacttgg ctcttcatct aactgatcat
      661 ttcaatgtta tggtaggcaa tggtcaaagt ctcaaatgtt tgggtaaatg tgttaaagtc
      721 ttgattaaca ttcaagatta taaatttgaa gcagattttt ttgtaattga tttacatggt
      781 gctgatgcta ttttgagttt agcttag
//
LOCUS       XM_071833099            1113 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843011), mRNA.
ACCESSION   XM_071833099
VERSION     XM_071833099.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1113
                     /gene="LOC139843011"
                     /note="uncharacterized LOC139843011; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139843011"
     CDS             1..1113
                     /gene="LOC139843011"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689200.1"
                     /db_xref="GeneID:139843011"
                     /translation="MVERKTCTVKQTNIWKDFIEAHRKLSVLTIGYCEDILGFYNRVL
                     NHVIFTTSKVILGKLPLAQLAMRGVTCGNVVQLTLCNGQPIRIDTDTYNSLQGTHSQG
                     KVSNVIWYQVLNEVNIVSKKLQSKDMHLEIAIKEINRLVEYFKDYRETSFSKVIDEAK
                     EIAVKMDVSPVFSQKRLIQRKKRFDESSSSQEVSFTPQETFRVQYFLYIVDKAILSLE
                     TRFEQIKNYDKLFDLKSFCGNLKNALKYKRKSNINGHELYRELKSFNIIGASEFKNPL
                     DILMHLNESQENFPNARIAYRILLIIPVTVASAERSFSKLKLMKIYLRSTMSRQRLSG
                     LAMMAIENEILESINCEALIKQFATKNARRASKTIG"
     misc_feature    811..1032
                     /gene="LOC139843011"
                     /note="hAT family C-terminal dimerization region; Region:
                     Dimer_Tnp_hAT; pfam05699"
                     /db_xref="CDD:399013"
ORIGIN      
        1 atggtagaga ggaagacatg cactgtcaag caaacgaata tatggaaaga ctttattgag
       61 gcccatcgta agctttcagt cttgacaatt ggttattgtg aagatattct tggtttctac
      121 aatagggttc tcaatcacgt gatctttaca acctctaaag ttatattggg taaactgcca
      181 cttgctcaac ttgctatgag aggagtgact tgtggcaatg ttgtgcaact aactctatgc
      241 aatggccaac caatcagaat cgacactgat acgtacaatt cgcttcaagg gacgcactca
      301 caaggcaaag tatccaatgt catttggtat caagtattaa atgaggtgaa cattgtgagc
      361 aaaaagctac aatcaaaaga tatgcatctc gagattgcta ttaaagaaat aaacaggttg
      421 gttgagtact tcaaggatta tagagaaacc agtttttcaa aagttattga tgaagctaaa
      481 gagattgcag ttaaaatgga tgttagccca gtattttcac aaaaacgttt gattcaaagg
      541 aaaaaaagat ttgatgagag ttcaagtagt caggaagttt catttacacc tcaagagact
      601 tttagagtac aatatttctt atacattgtg gataaagcta ttctttctct tgaaacaaga
      661 tttgaacaaa tcaaaaacta tgataagtta tttgatctaa agtcattttg tggcaacttg
      721 aaaaatgcac tcaagtataa aagaaaatcg aatatcaacg gtcatgaact ttatagggag
      781 ttgaagtcat ttaacataat aggagctagt gaatttaaga atcctttaga tattctgatg
      841 catcttaatg agtctcaaga aaattttcca aacgcaagga ttgcatatag aatattattg
      901 attattccag ttacagtggc atctgcggaa aggagctttt caaagctaaa actaatgaaa
      961 atttacctac gatcaacaat gtcccgacaa agactgagtg gattggcgat gatggctatt
     1021 gaaaatgaaa tcttagagag tataaactgt gaagcgctaa ttaaacaatt tgctaccaag
     1081 aatgcgagaa gagcttcaaa aaccattggt taa
//
LOCUS       XM_071833100            1194 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843013), mRNA.
ACCESSION   XM_071833100
VERSION     XM_071833100.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1194
                     /gene="LOC139843013"
                     /note="uncharacterized LOC139843013; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139843013"
     CDS             1..1194
                     /gene="LOC139843013"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689201.1"
                     /db_xref="GeneID:139843013"
                     /translation="MNVINVYGPHDNKSKLKMWKSISEILEQDRDGAWALCEYRAKRF
                     NDFISSNNLIDLPLGWILFTRVSDDGSKFRKLDRFLVTERFCDDWINLSAVALERKHS
                     DHCLIILKDDEKNFGPKPFKIFDAWLEEEDIDQVIIDAWKEESSVSNRRDCNFRNKLK
                     KVKEELRKWSNKRYGGLDGEIKLLKESAGALEIKAEIGELNQDRPSLEDLCYRTLSDD
                     QAANLEVAFSVQEIHEAILECGSTKAPGPDGFNMRFFKKHWDIIKTELVDAIMWFWDK
                     EEISRGCNASFVTLIPKKNDPLGLGDFRSISLIGSYYKIISKVLANRLKKVTPTLVGH
                     EQSAYLKDRFILDEALIVNESINFLRAKKHKGIIFKVDFEKAFDCLNWDFLLEVMKCM
                     GFGSK"
     misc_feature    853..>1167
                     /gene="LOC139843013"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; Region: ps-ssRNAv_RdRp-like; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 atgaatgtaa ttaatgtgta cgggcctcac gacaacaaaa gtaaactcaa gatgtggaaa
       61 tcgatctctg agattttgga acaggataga gacggggcct gggccctttg cgaataccgg
      121 gctaagaggt tcaatgattt tataagctca aacaatctta tcgatctccc attaggttgg
      181 attctcttta cccgggttag tgatgatggg tcaaaattta gaaaattgga tcgatttttg
      241 gtcaccgaaa gattttgtga tgattggatt aatttatcag cagttgcact tgaaagaaaa
      301 cattcggacc actgtcttat tatattaaaa gacgacgaaa agaactttgg ccctaagcca
      361 ttcaaaatct tcgatgcttg gcttgaagaa gaagatattg atcaggtgat tatagatgct
      421 tggaaagaag agtcatcggt ttctaatcgc agagactgca attttcgtaa taaactcaaa
      481 aaagtcaaag aggagcttag aaagtggagt aacaaaagat atggtgggtt ggatggggaa
      541 atcaaattat taaaagaatc agcaggggcc cttgaaataa aggctgagat tggagagctg
      601 aatcaggatc gacctagtct agaagattta tgttatcgca cattatccga tgatcaagct
      661 gctaatcttg aagtggcctt tagcgtacag gaaattcatg aggcaattct tgaatgcggg
      721 agcaccaagg ccccgggccc ggacgggttc aacatgaggt tctttaaaaa acattgggac
      781 attattaaaa ccgaacttgt tgacgcaatc atgtggtttt gggataagga agagatttca
      841 cgggggtgca atgcttcctt cgttacttta ataccgaaga aaaacgaccc cttgggcctt
      901 ggtgatttcc ggtcaattag tctaatagga agctattata aaatcatatc aaaggtgtta
      961 gctaatcgtt taaagaaagt tactcctacc ttggtggggc acgagcaaag tgcttattta
     1021 aaagatagat tcattttgga tgaagccctg attgtaaacg aatcgataaa ctttttgagg
     1081 gctaaaaaac ataaaggcat tatttttaag gtggacttcg aaaaggcttt cgattgcctt
     1141 aattgggatt ttcttttgga ggttatgaag tgcatggggt tcggatctaa atga
//
LOCUS       XM_071833102            1065 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843014), mRNA.
ACCESSION   XM_071833102
VERSION     XM_071833102.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1065
                     /gene="LOC139843014"
                     /note="uncharacterized LOC139843014; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:139843014"
     CDS             1..1065
                     /gene="LOC139843014"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689203.1"
                     /db_xref="GeneID:139843014"
                     /translation="MIRAGSWNVGTLTGKCYELVETLRKRKVDILCVKETRWKGRGAV
                     KIKDYKLWFSGSRVARNGVGLDAAEKRHFWESLDEVVRMCPLDHRLLIGGYLNGHIGT
                     NVEGYPSAHGGFGYGVRNEEGPSILDFAVAHDLVVANSFFKKTNAQLATFHSGGNSTQ
                     IDYLLLRKGDLRTCRDRKALTDLTCSSQHRLLVMDLVLKRRVTKSVRPVQPKILWKKL
                     NGEKAETFKTLVVERVKADVEMISHDDVEKMWTFLASTIREAAKEALGVAEGTLAGRT
                     RVEERYKEAKREAKKAVFRAKDKAYEDLYRKLDSKEGANDIYRIAKARERRRKDLDST
                     KFIKNEASQTLVKEDEIRKR"
     misc_feature    13..588
                     /gene="LOC139843014"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; Region: EEP; cl00490"
                     /db_xref="CDD:469791"
     misc_feature    order(22..24,103..105,283..285,289..291,484..486,562..567)
                     /gene="LOC139843014"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     misc_feature    order(103..105,562..564)
                     /gene="LOC139843014"
                     /note="putative metal binding site [ion binding]; other
                     site"
                     /db_xref="CDD:197306"
ORIGIN      
        1 atgattagag ctggtagttg gaatgtgggt actttgaccg gcaaatgtta tgaactagtg
       61 gagactttac gtaaacgtaa agtggatatt ttgtgtgtca aagagactag atggaagggt
      121 cgaggggcgg ttaagatcaa ggattacaag ttgtggttct cgggatcgag agtagctaga
      181 aacggtgttg gccttgacgc agctgaaaag agacactttt gggaatcgtt agacgaggtt
      241 gtgaggatgt gccctctgga ccatcgatta cttattggtg gatatctaaa tggtcatata
      301 ggaacgaatg tcgagggtta tccgagtgcc catgggggct ttgggtacgg agtaagaaat
      361 gaggaagggc cttctattct cgattttgct gttgctcacg atttggttgt tgcgaattcg
      421 ttcttcaaga agacgaatgc tcagttagca acttttcata gtgggggtaa tagtacccag
      481 attgactatt tgttacttcg caaaggggat cttaggacat gtagggaccg taaggccctg
      541 actgacttga catgctcctc ccagcacaga ttgttggtca tggatttggt tctcaagaga
      601 cgggtcacca agagcgtaag gcccgtccaa cctaaaatcc tatggaagaa gttgaacgga
      661 gaaaaggcag agactttcaa aactttggtt gttgaaagag ttaaggcaga tgtggaaatg
      721 atatctcatg atgatgtaga aaagatgtgg acttttctag cgtccaccat tagagaggca
      781 gcaaaggaag ccttaggtgt ggcagagggg actctggctg gtagaactag ggttgaagag
      841 agatataaag aagccaaaag agaagcgaag aaggctgtat tccgtgcaaa agataaggca
      901 tatgaagatt tatataggaa actagactcc aaagaaggag caaatgatat ctataggata
      961 gccaaagcta gggaacgaag gcgcaaggac ctagatagca ccaagtttat taaaaatgaa
     1021 gctagtcaaa ccttagtaaa ggaagatgaa attcggaaaa gatga
//
LOCUS       XM_071833103             855 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843015), mRNA.
ACCESSION   XM_071833103
VERSION     XM_071833103.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..855
                     /gene="LOC139843015"
                     /note="uncharacterized LOC139843015; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139843015"
     CDS             1..855
                     /gene="LOC139843015"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689204.1"
                     /db_xref="GeneID:139843015"
                     /translation="MERLNCVFHQSRASRFNRFIANNNLVEIPINGKRFTRISDDGTK
                     FSKLDRFFVNDKFMRLWANLSVVPLDRRDSDHCPLLLRDRIIDFGPKPFKIFDEWFNK
                     EGVDKVIIEAWGKGIESTRGDCVFRDKLKNVKRDLRMWSKKEFGNLDAEINELKQEAT
                     RLELLAESGCISDSDRVVWLDTRKRWVDKERIKMSMLKQKARIRWILEGNENSKYFHS
                     TIRRKLNKSNIRGLNINGSWVEDPKVVKDTVFVHFKNIFSKKNITRPSLWTTDQNSMV
                     GRNMQSGS"
ORIGIN      
        1 atggagcgat taaattgtgt ttttcatcaa tcaagagcgt ctcgtttcaa taggttcatt
       61 gctaataata atcttgttga gatcccgatc aatgggaaaa ggttcacgcg tattagtgac
      121 gatggcacaa agtttagtaa acttgatcgt ttctttgtaa atgataagtt tatgagactt
      181 tgggccaatc tctcggttgt tccacttgat cgtagagact cggaccattg cccactttta
      241 ctaagggatc gtattattga tttcggaccg aaacccttta aaatattcga tgaatggttc
      301 aacaaggaag gtgtggataa ggtaattatt gaggcttggg gtaaaggtat agagagtact
      361 agaggtgatt gtgtctttag agataagctc aaaaatgtga agcgagattt gaggatgtgg
      421 agtaaaaagg aatttggaaa tttagatgcg gaaataaatg agctaaaaca agaggcgaca
      481 agattggaac tgttggccga atccgggtgc attagtgata gtgatcgtgt ggtttggtta
      541 gacactcgta aaagatgggt tgataaagaa agaattaaaa tgagtatgtt gaaacaaaaa
      601 gcccgtatcc ggtggatctt ggaaggcaat gaaaattcga aatatttcca ttccacgatt
      661 cgaagaaaac taaacaaatc caacatccgc ggtttaaaca ttaatgggtc ttgggtcgag
      721 gatccgaagg tggttaagga cactgttttt gtacacttca aaaatatctt cagtaagaaa
      781 aatattacca ggccatcttt atggactact gatcaaaact ccatggtggg tcgtaatatg
      841 cagtctggtt cataa
//
LOCUS       XM_071833104            1689 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein FAR1-RELATED
            SEQUENCE 5-like (LOC139843016), mRNA.
ACCESSION   XM_071833104
VERSION     XM_071833104.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1689
                     /gene="LOC139843016"
                     /note="protein FAR1-RELATED SEQUENCE 5-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:139843016"
     CDS             1..1689
                     /gene="LOC139843016"
                     /codon_start=1
                     /product="protein FAR1-RELATED SEQUENCE 5-like"
                     /protein_id="XP_071689205.1"
                     /db_xref="GeneID:139843016"
                     /translation="MGGFKAHTLFSALSGGIDNVGPLPVDFNNFHRDLIQSLGDTDAH
                     IAIEQLLMKKNTLPNFSVEYYCDHNDFLRGVFWADNISKLNYKEFGDIVGFDATYGTN
                     MYNMVFVPLTGVDNHKKLVIFGAALLASESIESFSWFLDCFLKVFVTEPGLVSTDQDP
                     AMLEAIKIKFKTAQHRYVGRELFSNKDFCKQMNNIFWNQELNAEKFEKCWQHVLDEFG
                     LHDVDWFKDMYAMKEKWIPCFFRDTPIAGLMRTSSLCESENSFFIKCKNKHSKLLIEL
                     HARDFYTPTMFLLVQEEIFQSSISYVQISSTIGENEDKQLCVIEEKFPLPRLNWKYRV
                     TFNVKTAEASCSCLLFTREGRLCRHIFYMYHVHDVVAIPMVHLLRRWSKEVSETFNSI
                     FVYYDDKSESKKIINHVFNKLRKVSSLCRDDLDKLVSFRDKFDVLICDFFGSTSDEPS
                     TSTRGEHINRLWGFSKPVNSNIRAPENIRNKGQHRSNRILSSKEVVVKKHVKTSACKR
                     CGIHGHNVRTCTTDLTQLHNSKNKGKNVIDFELEDESEEDDEDLAYEDEDSDSD"
     misc_feature    <82..>1152
                     /gene="LOC139843016"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     Region: FHY3; PLN03097"
                     /db_xref="CDD:178645"
ORIGIN      
        1 atgggtggat ttaaagctca cacacttttt agtgctctta gtggtggtat tgataatgtt
       61 ggtcctttgc ctgtagattt caataatttt catcgtgatt tgatccaatc tctaggtgat
      121 actgatgcac atattgctat tgaacaactg cttatgaaga aaaatacttt acctaacttc
      181 agtgtcgagt attactgtga tcataatgat tttttacgtg gggttttttg ggctgacaat
      241 atttctaagt tgaactacaa agagtttggt gatattgttg gctttgatgc tacatatggt
      301 acaaatatgt ataacatggt ttttgtacct ctcactggag ttgataacca taagaagctt
      361 gttatttttg gagctgcttt attagctagt gaaagcatag aatcgtttag ttggtttctt
      421 gattgttttc tcaaagtttt tgtgactgaa ccgggcttag tgtccactga tcaagaccca
      481 gcaatgttgg aggctattaa aataaagttt aagactgcgc agcatcggta tgttggtcgt
      541 gagttgtttt caaataaaga tttttgtaag caaatgaaca acatattctg gaatcaagag
      601 ttgaatgctg aaaagtttga aaagtgttgg caacatgttt tagatgaatt tggcttgcat
      661 gatgtcgatt ggtttaaaga tatgtatgct atgaaggaga agtggatacc gtgttttttc
      721 cgagatacac caatagctgg attgatgaga acgtcatcac tttgtgagag tgaaaattca
      781 ttctttataa aatgcaagaa caagcattct aaattgctaa ttgagttgca tgctagggat
      841 ttttatacac caaccatgtt tctgttagtt caagaagaaa tatttcagtc ttctatctct
      901 tatgtgcaaa tcagctcaac cattggagag aatgaagaca aacaattatg tgtaattgaa
      961 gagaaatttc ctcttcctcg tctaaactgg aaatataggg ttacttttaa tgttaaaact
     1021 gctgaagcca gctgttcgtg tttgcttttt acacgtgaag gtcgtttatg taggcacata
     1081 ttttatatgt atcatgttca tgatgttgtt gctatcccta tggttcattt gttgaggagg
     1141 tggtcaaagg aggtatctga aacatttaat tccattttcg tatattatga tgataagtct
     1201 gaatccaaaa agattatcaa tcacgttttc aacaagctta ggaaggtttc ctctttatgt
     1261 cgagatgatc tagataaact tgttagtttt agagataagt ttgatgtatt aatttgcgat
     1321 ttttttggtt ctacttctga tgagccttct acatctacta gaggtgaaca tattaataga
     1381 ctatggggat tctctaaacc agtcaattcg aatatccgtg ctccagagaa tattagaaac
     1441 aaaggtcaac atagatcaaa tcggatattg tcttccaaag aagtggttgt taagaaacat
     1501 gttaagacaa gtgcttgcaa gcgttgtgga attcatggtc acaatgttcg gacttgtact
     1561 actgacctca ctcaactaca taattcaaag aataaaggaa aaaatgtcat tgattttgaa
     1621 ttagaagacg aaagtgagga agatgatgaa gaccttgcat atgaagatga agattctgat
     1681 tctgattaa
//
LOCUS       XM_071833105             723 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843017), mRNA.
ACCESSION   XM_071833105
VERSION     XM_071833105.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..723
                     /gene="LOC139843017"
                     /note="uncharacterized LOC139843017; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139843017"
     CDS             1..723
                     /gene="LOC139843017"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689206.1"
                     /db_xref="GeneID:139843017"
                     /translation="MAEDSSNKRKKRDENNKRKSNEIHDTEIEEKQKLKKKDKHGKFE
                     KDGKRKYVRKTPALNKKDIKLVENAVIKVLQNMGELKKVEKSLDRKINTFGEGTSRSK
                     PKDNSDDDFQRPSLKASNEKGIKHEEDEIIRSRSSPKCLYTTIQNMNDIQKEKIRQIG
                     FGSILEMKFFENQMKLGYYLVNNFDECSSTLNLKNGSIKITKETVHEVLCVLMKGLKI
                     KYVERSNPIDPVTISWRKQFNN"
ORIGIN      
        1 atggcggaag attcatccaa caaacggaaa aaaagagatg aaaataataa aagaaaatca
       61 aacgaaattc atgatacaga gattgaagaa aaacagaaat tgaaaaagaa ggataaacat
      121 ggaaagtttg aaaaagacgg aaaaagaaag tatgtaagaa agacacctgc actgaataaa
      181 aaggatataa agcttgttga aaatgcagta attaaggtac tccaaaatat gggagagttg
      241 aaaaaagttg aaaaaagttt ggatagaaaa attaatacgt ttggtgaagg cacaagtaga
      301 tcaaaaccca aagacaattc tgatgatgat tttcaaaggc catcattgaa agcttctaat
      361 gaaaaaggta ttaaacacga agaagatgaa attataaggt caagatcatc accaaaatgt
      421 ttgtacacaa cgatacagaa tatgaatgac attcaaaaag aaaagataag gcagattgga
      481 tttgggtcaa ttctagaaat gaagttcttt gaaaatcaga tgaaacttgg ttactatcta
      541 gtaaacaact ttgatgaatg ttcatcaaca ttaaatctta agaatggttc aattaaaatc
      601 acaaaagaaa cagtgcatga agtcttatgt gtactaatga aaggattgaa gattaaatac
      661 gtggaaagaa gcaatccaat tgatcctgtg actatttcat ggaggaaaca gtttaataac
      721 tag
//
LOCUS       XM_071833106            1542 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843020), mRNA.
ACCESSION   XM_071833106
VERSION     XM_071833106.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1542
                     /gene="LOC139843020"
                     /note="uncharacterized LOC139843020; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139843020"
     CDS             1..1542
                     /gene="LOC139843020"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689207.1"
                     /db_xref="GeneID:139843020"
                     /translation="MNNPMLRGEGGSGVRQEEVEAPKKKYERFEFKNFANCHPPEFHG
                     KVDPIVSQRWIDEIEETFMLCECPEHLKEIYAAHQMKGSCYEWWNFIVKSHGRNVATS
                     FPWEKFREMFMDQFAPPAKVSRLKSEFMNIEHGSKSVTEFNADPKLMMDHYHEKLNPK
                     ISEFIDKGTYKTLAEMMNRALVREHELKKKAAFKRKLDQDSKSMQSMSPKKGNFNSES
                     PHKSKGGFMPGKGGGKEVKTCNRCGKNHTDECKAGTTDCYSCGKPGHRAAESECLKYK
                     KDLASGGVKKEVKTEPKKSDSRPRARAHQITVLEAKESQNVVSEHPLEVDIANNKTIM
                     VYSVIKGCEIILDDEKFVIDLIPMHIGEFQVIVGMDWLDDNEGIIAGRKKIVLVQAPS
                     GKVIWIYGERARRAIPICTYARAKRFLSHGCCAFLAHVIDDSKKVFEINNVPVVNEFP
                     DVFSDELPGVPPDREVEFRIELIPGATPIAKAPYRLAPGRGAYSAFMTSVRNFKERKV
                     VRQVL"
     misc_feature    223..>426
                     /gene="LOC139843020"
                     /note="Retrotransposon gag protein; Region:
                     Retrotrans_gag; cl46289"
                     /db_xref="CDD:480629"
     misc_feature    <889..1176
                     /gene="LOC139843020"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; Region: pepsin_retropepsin_like; cl11403"
                     /db_xref="CDD:472175"
     misc_feature    order(973..984,994..1005)
                     /gene="LOC139843020"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
ORIGIN      
        1 atgaataatc ctatgttaag aggggaaggg ggaagtgggg taaggcaaga ggaagtagaa
       61 gccccgaaaa agaaatatga gcgttttgag ttcaagaatt ttgcaaattg tcatccacca
      121 gaatttcatg gtaaggttga tccgattgtt agtcaaaggt ggatcgacga gatagaggaa
      181 accttcatgt tgtgtgaatg tcccgagcac ttaaaggaaa tttatgcggc acaccaaatg
      241 aagggcagct gttatgaatg gtggaatttt atagttaagt cacatggacg aaatgtggcg
      301 acgagttttc cgtgggaaaa gtttcgtgaa atgtttatgg atcaatttgc tccacccgcc
      361 aaagttagta ggttaaagtc cgaattcatg aatattgagc atgggagtaa atccgtgacc
      421 gagtttaatg ccgatcctaa gttaatgatg gaccactacc atgagaagtt aaaccccaaa
      481 ataagcgagt ttattgataa gggtacgtat aagaccttag ccgaaatgat gaatagggct
      541 cttgtgaggg aacacgaact caagaagaaa gccgcgttta aacgaaagtt ggatcaagat
      601 tcaaagtcaa tgcaaagtat gagcccgaag aaaggtaatt ttaattctga gtccccacat
      661 aaatcaaaag ggggtttcat gccggggaag ggtggtggta aggaagtaaa aacgtgcaat
      721 aggtgtggta aaaatcatac ggacgagtgt aaagcgggta ctaccgattg ttactcatgt
      781 gggaaaccgg gtcatagagc cgccgaatcc gaatgtctga agtataagaa ggatttggca
      841 agtggtggtg ttaagaagga ggttaaaacg gaaccaaaga aaagtgatag ccgaccaaga
      901 gcccgagctc atcagattac cgttctcgaa gcgaaggaat cccaaaatgt ggtgtcagag
      961 catcctttag aggttgatat agcgaacaat aaaaccatta tggtatatag tgttattaag
     1021 ggatgtgaaa tcattttgga tgatgagaaa tttgttatag atttaatacc catgcatata
     1081 ggagagtttc aagtaattgt aggtatggat tggcttgatg acaatgaagg aataatagcg
     1141 ggtcgaaaga aaattgtatt agtccaagca ccaagtggga aagttatttg gatttatggg
     1201 gaacgggcca gacgtgctat tcctatatgt acgtatgcta gagccaaacg atttttatcc
     1261 catgggtgtt gtgcgttttt ggcacatgtg atcgatgatt caaagaaagt gtttgagata
     1321 aataatgtac cggtagttaa tgagtttccg gatgtgtttt cggatgaatt gccaggtgtt
     1381 cctcccgatc gagaagtaga gtttcgaata gaattgattc ccggagccac gccaattgcc
     1441 aaagcacctt atcgactagc tccgggaaga ggagcataca gtgcatttat gacaagtgtt
     1501 agaaacttta aggagagaaa agttgttcgc caagttctct aa
//
LOCUS       XM_071833108             501 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides secreted RxLR effector
            protein 161-like (LOC139843021), mRNA.
ACCESSION   XM_071833108
VERSION     XM_071833108.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..501
                     /gene="LOC139843021"
                     /note="secreted RxLR effector protein 161-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139843021"
     CDS             1..501
                     /gene="LOC139843021"
                     /codon_start=1
                     /product="secreted RxLR effector protein 161-like"
                     /protein_id="XP_071689209.1"
                     /db_xref="GeneID:139843021"
                     /translation="MHDPREQHMHALKRIIRYIQGTTNLGLQLYASSSNTLVSYFDAD
                     WAGCPTTRRSTSGYCVFLGNNLLSWSSKRQLTPSLSSAEAEYRGVANAVAKTCWVRNL
                     LRKLHCPLTLATLVYCVNGQVRVLHVPFRYQFADIFTKGLPFALFDEYRSSLSVRSLI
                     LCQKGK"
     misc_feature    118..429
                     /gene="LOC139843021"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(124..135,238..246,253..255,355..357,418..420)
                     /gene="LOC139843021"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgcatgatc cacgagagca acacatgcac gccctcaaaa ggatcattcg gtacattcag
       61 ggaaccacta accttggtct ccagttatat gcatcttctt ccaacacatt agtttcttac
      121 tttgacgctg attgggcggg ctgccccact actagacgat caacatctgg ctactgcgtt
      181 tttctcggca acaacctcct ctcttggtcg tctaagcggc aactcacgcc ctctctctcc
      241 agtgcagaag cagagtatcg tggggttgcc aatgcagttg ctaagacttg ttgggttcgt
      301 aatcttcttc gaaagctaca ttgtccactc accttagcaa ctctagtata ttgtgttaat
      361 ggacaggttc gggtcttaca tgttccgttc agatatcagt ttgccgacat cttcactaag
      421 ggtctcccgt ttgcattatt tgatgagtac aggtccagtt tgagcgtccg gagtttgatt
      481 ctctgtcaaa aaggcaaatg a
//
LOCUS       XM_071833109            1395 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-amyrin
            28-monooxygenase-like (LOC139843022), mRNA.
ACCESSION   XM_071833109
VERSION     XM_071833109.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1395
                     /gene="LOC139843022"
                     /note="beta-amyrin 28-monooxygenase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 Proteins"
                     /db_xref="GeneID:139843022"
     CDS             1..1395
                     /gene="LOC139843022"
                     /codon_start=1
                     /product="beta-amyrin 28-monooxygenase-like"
                     /protein_id="XP_071689210.1"
                     /db_xref="GeneID:139843022"
                     /translation="MAVRKKKKDRRYSKGCNNQALLPRGSKGWPMIGESFEYFGAGWK
                     GHPEKFLHDRMSKFSSLVFRTSLMLEDVAVLCGPQGNKFLFSNEKKLMQPWLPTTIAK
                     IFPSSQETFNSGNSKFRKLLINVLKTEALQQFVPIIGDVAQQYFESKWKGKKEIMAYE
                     LAKTFTFELACKILLNIYDPELIKYLFGPFEAIGKGFLSIPIDFPMTPYRRAINAAKF
                     IRKELVAIAKQRKIDLNEGKATPTQDILSRFIVYRDENGEFPGEDEIADQIQGLLIGG
                     YENMSTTCAALVQFLAELPEIYHGVYNEQTEIAKCKAPGEQLEWSDLSKMNYSWKVAR
                     EVIRLTQPSQGYRQVMTDFMYEGYSIPKGWKVYWTALSTHKNPELFPEPEKFDPSRFE
                     GNGPEPYTFVPFGGGAHLCPGKEYARLAILVFIHHLVTKFKWEKINADERIVYNPLPH
                     PAKGLPIRIYPHIS"
     misc_feature    160..1383
                     /gene="LOC139843022"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; Region: CYP90-like;
                     cd11043"
                     /db_xref="CDD:410669"
     misc_feature    order(355..357,376..378,508..510,811..816,823..828,
                     835..840,847..849,1009..1011,1039..1041,1108..1110,
                     1207..1215,1225..1239,1246..1251)
                     /gene="LOC139843022"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410669"
     misc_feature    order(577..582,811..813,820..825,835..837,1030..1035,
                     1036..1038)
                     /gene="LOC139843022"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410669"
ORIGIN      
        1 atggctgttc gaaaaaaaaa aaaagataga aggtattcga agggatgcaa caatcaagca
       61 ttactgccac gtggtagtaa agggtggccg atgattggag agagcttcga gtattttggc
      121 gccgggtgga aaggtcatcc tgaaaagttc ttacacgacc gcatgtccaa attttcgtct
      181 ctagttttta gaacttctct tatgctagag gacgttgcgg ttttatgtgg tcctcaaggt
      241 aataagttct tgttctcaaa tgagaagaaa cttatgcaac cttggttacc aacaacaata
      301 gccaaaatct ttccatcttc ccaggaaact tttaattcag gaaatagcaa gtttcgaaaa
      361 ctccttataa acgttctcaa gacggaagcc ttgcaacaat ttgtccccat tattggtgat
      421 gttgcacaac aatattttga atctaaatgg aaggggaaga aagaaattat ggcttatgaa
      481 ctcgctaaaa cctttacttt tgagctagct tgcaagatct tacttaatat ttatgatccc
      541 gaactgatca aatatttatt cggcccgttt gaggccatcg gtaaagggtt tctttcaatc
      601 ccaattgatt ttcctatgac accatataga agagcgatca atgcagccaa gtttatacga
      661 aaagaacttg tagccatagc gaaacaaaga aaaattgatt tgaatgaagg gaaagcaaca
      721 ccaacccaag acatattgtc acgcttcatt gtctataggg acgaaaatgg cgagttccct
      781 ggagaagatg aaattgctga ccagattcaa gggttactga ttggagggta tgagaacatg
      841 agcaccactt gtgctgcact tgtacagttt cttgctgagt tgcccgaaat ctatcatgga
      901 gtctacaacg aacaaactga aattgcaaag tgtaaagcac ctggagaaca gttggagtgg
      961 tcagatctat caaagatgaa ttactcatgg aaagttgcac gtgaggttat aagattaacc
     1021 caaccgagcc aaggttatag acaagtcatg accgatttca tgtacgaagg ttactctatc
     1081 cccaagggct ggaaggtata ttggactgca ctctcaaccc acaaaaaccc tgaactcttt
     1141 ccggaacccg aaaaatttga cccatcaaga ttcgaaggca atggtcccga accttatacc
     1201 tttgtgccgt tcggaggagg agctcatctg tgtccaggaa aagagtatgc tcgactagca
     1261 atacttgtgt tcattcatca tcttgtaaca aagttcaaat gggagaaaat aaatgctgat
     1321 gaacgaattg tatataaccc gttgccccat ccagccaagg gtcttcctat tcgtatttac
     1381 cctcatatat cttaa
//
LOCUS       XM_071833110             891 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843023), mRNA.
ACCESSION   XM_071833110
VERSION     XM_071833110.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..891
                     /gene="LOC139843023"
                     /note="uncharacterized LOC139843023; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:139843023"
     CDS             1..891
                     /gene="LOC139843023"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689211.1"
                     /db_xref="GeneID:139843023"
                     /translation="MDKAFKMFNFLIDDLDDEKIVTFVNSLWEEEEEEVEGEASSSRV
                     PRPRTYIARDREAAAERLYNDYFAESPIYPEKKFKRRFRMSRQLLLRIIEGISNYNSH
                     NIPDYFLYFRERPDCTGRQSLTIYQKCTAAIRQMAYGTTPDMFDEYIKIGEKTAGQCL
                     ENFCQCVFHLFAREYLRKPTADDIARLYNFHSQKHGLPGMLGSIDCMHWEWKNCPVTW
                     QGQYTRGDQKGPSVMLEAVASQDLWIWHAFFGMAGSNNDINVLNMSPLFNTIKDGTAP
                     PSPFEVNGHHYERGYYLGDV"
     misc_feature    520..>885
                     /gene="LOC139843023"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atggataagg ccttcaaaat gtttaacttt ttaatcgatg atttggatga tgaaaaaatt
       61 gttacgttcg ttaacagttt atgggaagaa gaggaagaag aagtagaagg agaggcgagt
      121 agttcacgag tccctcgtcc ccgcacttat attgcacgag atcgtgaggc tgctgccgag
      181 aggttataca atgattattt tgcggagtca cctatttatc cagaaaaaaa gttcaaacga
      241 cggtttcgaa tgagtcgtca attgttgctc cgtatcatcg aaggtatatc taactataat
      301 agtcataata tacccgatta ttttttgtac tttagggagc gtcccgattg tactggacgt
      361 caaagtttga caatatacca aaagtgtacg gcggccatac gccaaatggc gtatggaacc
      421 acacctgata tgtttgacga atatataaaa attggtgaga aaactgctgg ccaatgtcta
      481 gaaaactttt gtcaatgcgt atttcatttg tttgcaagag agtatttacg taaaccaacc
      541 gcagatgata ttgctcggct ttataatttt cattcacaaa aacatggttt accgggtatg
      601 cttggtagca ttgattgtat gcattgggag tggaaaaatt gccctgttac gtggcaaggg
      661 caatatactc gaggtgatca aaaaggcccg tctgttatgc tcgaggcagt agcctctcaa
      721 gatttgtgga tatggcatgc attttttggt atggcgggtt caaacaacga cattaatgtt
      781 ttaaatatgt cgccattatt caacaccata aaagatggca ctgctccacc ttcaccattt
      841 gaagtaaacg gacatcacta tgagagaggg tattacttag gtgatgtttg a
//
LOCUS       XM_071833111            1173 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139843024), mRNA.
ACCESSION   XM_071833111
VERSION     XM_071833111.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1173
                     /gene="LOC139843024"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:139843024"
     CDS             1..1173
                     /gene="LOC139843024"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071689212.1"
                     /db_xref="GeneID:139843024"
                     /translation="MDLPQGYFSKNETKVCRLVKSLYGLKQAPRQWNEKLTQALKENN
                     FVQSVSDYSLFVKSENDIFVALLVYVDDIVITGNNEFEIEKFKTFLKTKFLIKDLGEL
                     KYFLGIEVLKCEQGVCLSQRKYCIELINEFGLLGSKPVAVPMDFNVKLNTEPNSNDAL
                     LSNVTKYQKLVGKLIYLTNTRPDIAFAVQCLSRYMHSPLSSHLKLALRILRYLKGSPG
                     KGVLLSRSASISLSAYVDADWGKCLQSRKSITGYCVFFCGSLVSWKSKQQAAVSRSST
                     ESEYRAMAATTAEILWIINILTDLKVNNLLPVNLYCDNRSAIQIAANPVFHERTKHFE
                     IDLHLVRDKCSTGAIRIVNVQSASQLADIFTKGLGVNSHKFICDELKLIDLFQKLD"
     misc_feature    <10..432
                     /gene="LOC139843024"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    697..1107
                     /gene="LOC139843024"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(706..717,820..828,835..837,937..939,1015..1017,
                     1096..1098)
                     /gene="LOC139843024"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atggatcttc ctcagggtta tttttctaaa aatgaaacta aggtttgtag gttagtgaaa
       61 tctttatatg gcttaaaaca agcacctaga caatggaatg aaaaattgac tcaagcctta
      121 aaagaaaata attttgttca aagtgttagt gattattcat tgtttgtaaa aagtgaaaat
      181 gatatttttg ttgcattgct tgtgtatgtt gatgatattg tgattactgg gaacaatgaa
      241 tttgaaattg aaaagtttaa aacttttttg aaaaccaagt ttttaatcaa agatttgggt
      301 gagttgaaat attttttagg aatagaagtt ttaaaatgtg aacaaggtgt ttgtttgtca
      361 caaaggaagt attgcattga gttgattaat gagtttggtc tgttgggaag caaaccagta
      421 gctgtaccaa tggattttaa tgttaagctt aacactgaac caaatagtaa tgatgcattg
      481 ttgtctaatg ttactaaata tcagaagctg gtgggtaaac ttatttatct tacaaatacc
      541 agacctgata tagcatttgc tgttcagtgt ttgagtagat atatgcactc acctttgagt
      601 tcacatttga aattggctct cagaatttta agatacctta aaggatctcc aggtaaagga
      661 gtgttgcttt ccaggtctgc ttctatttct ttatctgctt atgttgatgc agattggggt
      721 aaatgtcttc aatctagaaa gtccattact ggttactgtg ttttcttttg tggttctcta
      781 gtttcttgga aaagtaagca gcaagctgct gtatctagat cttccacaga gtctgaatac
      841 agagctatgg ctgctacaac tgctgaaata ttgtggataa ttaacatttt aactgattta
      901 aaagttaata acttgcttcc tgttaattta tattgtgaca ataggtctgc aattcaaatt
      961 gcagccaatc ctgtgtttca tgagagaact aaacattttg aaattgattt gcatttggtt
     1021 agagacaaat gttcaacagg agcaatcaga attgttaatg ttcagtctgc tagtcaatta
     1081 gcagatattt ttaccaaagg tcttggtgtt aattcacaca agtttatttg tgatgagtta
     1141 aaactgatag acctgttcca gaaattagat tga
//
LOCUS       XM_071833112            1452 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides beta-amyrin
            28-monooxygenase-like (LOC139843026), mRNA.
ACCESSION   XM_071833112
VERSION     XM_071833112.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1452
                     /gene="LOC139843026"
                     /note="beta-amyrin 28-monooxygenase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:139843026"
     CDS             1..1452
                     /gene="LOC139843026"
                     /codon_start=1
                     /product="beta-amyrin 28-monooxygenase-like"
                     /protein_id="XP_071689213.1"
                     /db_xref="GeneID:139843026"
                     /translation="MDIFYASLVSVFVIVVSFSLHYFLYKSKPTQDHKLLPPGGTGWP
                     IIGESFEFLATGWKGHPEKFIFDRMKKFSPIVFRTSLMLEDASVFCGAQGNKFLFSNE
                     NKLVQGWWPSSVDKIFPSSDKTSKIEAIKMRKMLPNFFKPEALHRYLPIMDVVTQQHF
                     ANGWNGKDKIVTYELTKNFTFWLACKIFISIDDPERVKYLCIPFESIAAGILSIPIDL
                     PGTPFRRGINAANFIRKELLGIVKQRKIDLSEGKASPTQDILSHMLLFSDEEGKFMEE
                     NDIADKILGLLIGGHDTASSACAFIVKYLAELPEIYDGVYKEQMEILESKAQGELLNW
                     EDLSKMKYSWNVACEVLRLASPLQGAFREAITDFMYNGYSIPKGWKLYWSANSTHKNP
                     ECFPEPQKFDPSRFEGRGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHHLVTKFKWE
                     KIIPDEQIVVNPMPSPAKGLPIRLYPHKSLNMV"
     misc_feature    202..1428
                     /gene="LOC139843026"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; Region: CYP90-like;
                     cd11043"
                     /db_xref="CDD:410669"
     misc_feature    order(397..399,418..420,550..552,853..858,865..870,
                     877..882,889..891,1051..1053,1078..1080,1084..1086,
                     1153..1155,1252..1260,1270..1284,1291..1296)
                     /gene="LOC139843026"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410669"
     misc_feature    order(619..624,853..855,862..867,877..879,1072..1083)
                     /gene="LOC139843026"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410669"
ORIGIN      
        1 atggatatct tttatgcatc tcttgtgtct gtttttgtta tcgttgtttc tttctcactt
       61 cattattttc tatacaagtc caaaccaaca caagatcata aactacttcc acctggtgga
      121 accgggtggc ccataatcgg agaaagtttc gagtttcttg caaccggatg gaaaggccat
      181 cctgaaaagt tcatattcga ccgcatgaaa aagttttcac ctatcgtatt tagaacgtct
      241 ctcatgctag aagacgcctc agtgttttgt ggtgctcaag gtaacaagtt cttgttctca
      301 aacgaaaaca aacttgtaca aggatggtgg ccttcttcgg tcgacaaaat ctttccatca
      361 tccgataaaa cctcaaaaat agaagccatt aaaatgcgaa aaatgcttcc aaattttttc
      421 aagcccgaag ccttacatcg ttatttacct attatggacg tcgtgaccca acaacatttt
      481 gccaatggtt ggaatgggaa agataaaata gttacatatg aacttacaaa aaacttcact
      541 ttttggcttg cgtgcaagat ctttattagt attgatgatc ctgaaagagt aaaatactta
      601 tgtatcccgt ttgaaagtat cgcggcaggc atcctttcaa tcccgattga tcttcctggg
      661 acgccatttc gaagagggat taatgctgcc aactttataa gaaaagaact cttaggaatt
      721 gtaaaacaaa gaaaaattga tttgtctgaa gggaaagcat caccaacaca agacatatta
      781 tcacacatgc ttttatttag tgatgaagaa ggcaagttta tggaggaaaa tgatattgcg
      841 gataagatct tagggctgtt gattggtggt catgacactg cgagctcggc ttgtgctttt
      901 atcgttaagt atctcgccga gttgcctgaa atttatgatg gtgtatacaa agagcaaatg
      961 gaaatcttag aatctaaagc acaaggagaa ctgttgaact gggaggattt atcaaagatg
     1021 aaatattcat ggaatgttgc ttgtgaagtt cttagattag catcaccact ccaaggtgct
     1081 tttagagaag ctatcactga tttcatgtac aatggctatt ctatccccaa gggctggaag
     1141 ttatattgga gtgcaaactc aacccataag aaccccgagt gctttccaga acctcaaaaa
     1201 tttgacccgt caagatttga aggaagagga ccagcaccgt acacgtttgt gccatttggt
     1261 ggtgggccac gaatgtgtcc cggaaaagag tatgctcgac tagaaatact tgtatttatg
     1321 catcatctcg taacaaagtt taaatgggag aaaataattc ctgatgagca gattgtggtt
     1381 aatccgatgc ctagtccagc taagggtctt cctattcggc tttatccaca taaaagtttg
     1441 aacatggttt aa
//
LOCUS       XM_071833114            1098 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139843028), mRNA.
ACCESSION   XM_071833114
VERSION     XM_071833114.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1098
                     /gene="LOC139843028"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:139843028"
     CDS             1..1098
                     /gene="LOC139843028"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071689215.1"
                     /db_xref="GeneID:139843028"
                     /translation="MKIDLGKISCLRVTSFVAYWLRLATSLTLWPCRLFLAEAKRLKS
                     ELRKVAFVLHHYLFICMLAGGGLSELDLAKRRIISSLHKEFAMTDLGPLNYFLGIHAT
                     RTASGMFLSQIQYATEIIERVGMPTSHPCRTPVEPGAKLTSHGPPVKDPTLYRSLAGA
                     LQYLTFTRLDISYAVQQICLFMHDSWEQHMHALKRIIHYIHGTTDHGLQLYASSLTTL
                     VTYSDVDWAGCPTTRCYTSGYCVFLSNNLLSWSLKWKLMPSRSIFEADYRGFANPVAE
                     TCWIHNLLRVLHCPLTSTTLVYCDNASSVYLSSNQVQHHQTKHIEIDIQFVCDLIAQG
                     QVRVLHMPSRYQFADIFTKGHPLSPLVSIYG"
     misc_feature    <181..408
                     /gene="LOC139843028"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    655..1077
                     /gene="LOC139843028"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; Region: RNase_HI_RT_Ty1; cd09272"
                     /db_xref="CDD:260004"
     misc_feature    order(667..678,781..789,796..798,898..900,976..978,
                     1057..1059)
                     /gene="LOC139843028"
                     /note="RNA/DNA hybrid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:260004"
ORIGIN      
        1 atgaaaattg atttaggcaa gatctcatgt ctaagagtca cttcgttcgt agcttactgg
       61 cttaggcttg caacttcact tactttatgg ccttgccgcc tttttctagc agaagctaag
      121 cgcttgaaaa gcgagctaag aaaggttgct tttgtcctgc atcattatct attcatttgc
      181 atgctagccg gaggaggact atccgaacta gacctagcca aaagacggat tatttcttcc
      241 ttacataagg aatttgctat gactgatttg ggtcccttaa actactttct tgggattcat
      301 gcaactcgca cagcatctgg catgttcctc tctcaaatac aatatgctac cgagattatt
      361 gagcgggtcg gcatgcccac ttctcatcct tgcaggaccc ccgttgaacc aggtgccaag
      421 cttactagtc acggacctcc tgtcaaggac ccgactctct atcggagcct tgcaggtgca
      481 ttacagtacc ttacattcac tcgcctagac atctcatacg ctgttcagca gatctgcctt
      541 ttcatgcacg attcttggga acaacacatg catgccctca aacggatcat tcactatata
      601 catggtacta ctgatcacgg tttacagtta tatgcatcat ctctaactac tttggtcaca
      661 tactctgacg ttgattgggc cggctgccca actaccagat gttatacctc tggatactgt
      721 gtttttctca gtaacaacct tctctcatgg tcattaaagt ggaaactcat gccctctcgc
      781 tccattttcg aagcagatta ccgtgggttt gccaatcccg ttgcagaaac ttgttggatt
      841 cataaccttc tccgcgtgct tcattgtcct ctcacatcca ctacattggt atactgcgat
      901 aacgccagct cggtctatct gtcttctaac caggttcagc atcaccagac caagcacatt
      961 gagatcgaca ttcaatttgt atgtgatctc attgctcagg ggcaggtacg ggttcttcac
     1021 atgccatcca gatatcagtt tgcagacatc ttcaccaaag gccacccgct tagcccgtta
     1081 gtctctattt acggttag
//
LOCUS       XM_071833115             720 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843029), mRNA.
ACCESSION   XM_071833115
VERSION     XM_071833115.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..720
                     /gene="LOC139843029"
                     /note="uncharacterized LOC139843029; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139843029"
     CDS             1..354
                     /gene="LOC139843029"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689216.1"
                     /db_xref="GeneID:139843029"
                     /translation="MDLESLYFYADTNVTVSNLEATLKSGVGYYDLRVGQRLLENVIL
                     HIFRYNKFEVFVFSFNDQIQDAINGGFFTGLSLQPKSNDLDTGADTAAHMLALPKGHI
                     KSLQVQIFWLVRLLT"
     misc_feature    <172..>306
                     /gene="LOC139843029"
                     /note="alpha-amylase/limit dextrinase; Region: PLN02877"
                     /db_xref="CDD:215474"
ORIGIN      
        1 atggatctcg aatcgctata tttttacgcg gatacaaatg tgaccgttag taacttggag
       61 gctactctta aatcaggagt tggatactat gatttaagag tcggtcagag gcttcttgaa
      121 aatgtaatat tacatatttt cagatacaat aagtttgaag tatttgtatt cagctttaat
      181 gatcaaattc aagatgccat aaatggtggt ttcttcacag gattatcttt gcaaccaaaa
      241 agtaatgacc ttgatactgg ggctgataca gcagcacata tgctagcttt acccaagggt
      301 catattaagt ctttacaagt tcaaattttt tggttggtta ggctgcttac ttaaaggagt
      361 ttgttcttac acaattgtga aggttaagat gtacaatact catttctatc atctcaaatt
      421 atagcgtagt tgtgcgtctt ttatctttgg tttataggtt aaaggatcag atatttcaac
      481 ttattgtgga cctcccgctg cgtatgcttc acagccagtg gaaacagtag gattttgttg
      541 tattgtcaaa acatattcga ctactctttg tttctcttca tatctgtcta tttgcactct
      601 gattgccttt tcgctgatta actatctcaa atattagtga agtatagaag atgtccacga
      661 atttgttcca gggttacctt aacatggccc ttataggttc tcaggtgatg ggttgcgaac
//
LOCUS       XM_071833116             903 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843031), mRNA.
ACCESSION   XM_071833116
VERSION     XM_071833116.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 44% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..903
                     /gene="LOC139843031"
                     /note="uncharacterized LOC139843031; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139843031"
     CDS             1..903
                     /gene="LOC139843031"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689217.1"
                     /db_xref="GeneID:139843031"
                     /translation="MLRGSSDDSFRMLPIYLHNLKIHNPGTITNLVTDKENKFVMCYM
                     SIGVVIRSFVQHVRPIIIVDAAHLKGGYLGTNLVAVAMDGNNGILPLAYGIGEGETNS
                     VWSWFFGNLRDHLMSYGMVDRMSEITFISDRAASIAHGIANVFPEAFHAHCARHLFMN
                     IKTKSNKMKFFDWHFWKMVKAYRASDFHDHLDVFRRRLKASYKVLCEDGINRWSRSQS
                     THIRRKDARSTLRLLNKKAQRRKKHLAPAAKYEAQGRKKDLASTAITGRKVARSDYTP
                     LRLQKYSYGPVHSLQHLQFYTQIT"
     misc_feature    178..480
                     /gene="LOC139843031"
                     /note="MULE transposase domain; Region: MULE; pfam10551"
                     /db_xref="CDD:463145"
ORIGIN      
        1 atgttacgtg gcagtagtga tgactccttt agaatgcttc ccatttacct tcataacctt
       61 aagatccaca acccggggac catcaccaat ttggttaccg ataaagaaaa taaatttgtg
      121 atgtgttaca tgtccattgg agtagttatt cgatcatttg tgcaacatgt ccgcccgata
      181 atcatcgtcg atgctgcaca tttaaagggt gggtacctgg gtactaattt agttgctgtt
      241 gcgatggatg gcaataatgg aattttgcca ttggcttatg gaattggtga aggcgagaca
      301 aacagtgttt ggtcatggtt ttttggtaac ctaagagatc atttaatgag ttatggtatg
      361 gttgatcgta tgtcagagat tacttttatt tctgatcgtg ctgcttcaat agcacacggc
      421 attgcaaacg tgtttccgga agcgtttcac gctcattgtg cacgtcattt attcatgaac
      481 atcaaaacta aatccaacaa gatgaaattc ttcgactggc acttttggaa aatggttaag
      541 gcgtaccgtg cgtcggattt tcatgatcat ctagatgtat ttcgaaggag attgaaagcg
      601 tcttataaag ttctatgtga ggatggtatc aatagatggt ccagaagtca atctactcat
      661 attaggcgca aggacgcaag aagcaccttg cgcctgctta ataaaaaggc gcaaagacgc
      721 aagaaacacc ttgcgcctgc tgctaaatac gaggcgcaag gccgcaagaa ggaccttgcg
      781 tctacggcta ttacgggacg caaggtcgca aggtctgatt acacaccttt gcgccttcaa
      841 aaatacagtt acggacctgt tcacagttta caacatttac agttttatac acaaattaca
      901 taa
//
LOCUS       XM_071833117            1939 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein REPRESSOR OF
            SILENCING 3 (LOC139843032), mRNA.
ACCESSION   XM_071833117
VERSION     XM_071833117.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1939
                     /gene="LOC139843032"
                     /note="protein REPRESSOR OF SILENCING 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:139843032"
     CDS             23..1939
                     /gene="LOC139843032"
                     /codon_start=1
                     /product="protein REPRESSOR OF SILENCING 3"
                     /protein_id="XP_071689218.1"
                     /db_xref="GeneID:139843032"
                     /translation="MEEATPLDNKTRIYVGGLGGAVTEDDLRKTFSSLGDVISVDIVR
                     TKDRSFAYLDFVPLSDKSLPKLFSTYNGCMWKGGKLRLEKAKEHYLLRLKREWQEEAE
                     NVKKAFDSCNADDASKSRDTIEKPKKPSPADKTQINIFFPKLGKVKSLAQVGIGKHKY
                     SFQHIQVPALPTHFCDCEEHSLAFPPPSKRQIPEVDTASYEINEKELDIMNSVMNKIF
                     ERANPSKQVIGKSESVNIRSGSSSKNELVDVENDEEDNLTDEDNLIINVANGNNDCTD
                     MLGEMRTMMANREPVAKKPITKKPKIVNESSQKKTTPLSKKTKLPQSKKIDNKAEIES
                     DKKQPESNSLRSLKSTWKDMLGQKRKTSFNISEFIASIPQKTQVEVKGDDADQSSIDK
                     KNLVDNNQSKSEDDKKEPELLTNIDELTTEVVDDIIANDLQQKEKEPVVDNLDVPLTT
                     TAVATVKKFSVSDVVQDIPNREDEEPRPVDLDCKLEKVDNYDYSKKLNETAPVKNDQD
                     LIRTARGEFWRHKSSWTQLISTASNSSFSISQIVPSLSYETKHEQKVGTLDSQPENKN
                     LDNQIPTGKEVALSPVKKKTDRKRKIMSLDNLESEGSCSFMRTEESMKEWRKAKASLK
                     GTVNKKKRLANESA"
     misc_feature    23..1912
                     /gene="LOC139843032"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
ORIGIN      
        1 ttcatctgtg tgctcgataa caatggaaga agcaaccccc ctagacaata aaacaagaat
       61 atacgtcgga ggattaggcg gcgccgtcac agaagacgac ctccggaaaa ctttttcgtc
      121 gttaggtgac gtcatctccg tcgatattgt ccgtactaaa gatcgtagtt ttgcttacct
      181 cgacttcgtt cctttatccg ataaatcact tcctaaacta tttagcacgt ataatggatg
      241 tatgtggaaa ggagggaagc tgaggcttga gaaggctaag gaacactatc ttttacgatt
      301 aaagcgcgag tggcaagagg aagctgaaaa tgttaaaaag gcattcgaca gttgtaacgc
      361 tgatgatgct tcgaaaagtc gtgatactat tgaaaaacca aagaagcctt cacctgctga
      421 taagacacag attaacatat tcttccccaa gctagggaag gtgaaatcac tagctcaagt
      481 tggaatcggc aaacacaaat atagtttcca acatattcaa gttcctgctt taccaaccca
      541 cttttgtgat tgtgaggagc actcacttgc ttttccccca cccagtaaaa gacaaatacc
      601 tgaagttgac actgcaagtt atgaaattaa cgagaaagag cttgatatta tgaactcggt
      661 gatgaacaag atctttgaaa gggcaaatcc gtctaagcag gtgataggta agtctgaatc
      721 ggtgaatata agaagtggtt ctagctccaa aaatgaattg gttgacgtgg aaaatgatga
      781 ggaagataat ttaaccgatg aagataatct gataatcaat gtagcaaatg ggaataatga
      841 ctgtacagat atgttggggg aaatgagaac tatgatggca aatcgggaac ctgtagccaa
      901 gaaaccaatt acaaagaagc caaagattgt gaatgaaagt agtcaaaaga agactacacc
      961 actcagtaag aagacaaaat taccccaatc aaaaaagata gacaacaaag cagaaataga
     1021 atcagataaa aaacaaccgg aaagcaattc tttgcggtct ctgaagtcca catggaaaga
     1081 tatgcttggc caaaagcgca aaacgtcatt caatatttca gagttcattg cttctattcc
     1141 tcaaaaaacg caagtcgaag ttaaaggcga tgatgcagat cagtcatcta tagataagaa
     1201 gaatttggtt gacaataacc aaagtaaatc agaggatgat aaaaaggagc ccgaattact
     1261 tacaaacata gatgaactta caacagaagt tgtcgacgac attattgcaa atgatttgca
     1321 gcaaaaagaa aaggaaccag tggtcgataa tcttgacgtt ccactgacaa caactgctgt
     1381 tgcaactgtt aaaaaattta gcgtatcgga tgttgttcaa gacataccta atcgtgaaga
     1441 tgaggaacca agaccagttg atcttgattg caagttagag aaggttgaca attatgatta
     1501 ttcgaagaaa ttaaacgaga ctgcacctgt gaaaaatgat caagatttga ttcgaacagc
     1561 tagaggtgaa ttttggcgac ataagtcctc gtggacacaa ttgattagca ctgcaagcaa
     1621 tagttcattt agcatatcac agattgtccc cagtttaagt tatgaaacga aacatgaaca
     1681 gaaagtgggt actttggatt cacaacctga aaacaagaat cttgataatc agatcccaac
     1741 tgggaaggaa gttgctttat cacctgtgaa gaagaaaact gacagaaaaa ggaagattat
     1801 gtctctggat aacttagaat ctgagggaag ctgctcgttt atgaggacag aagaatccat
     1861 gaaagagtgg aggaaggcaa aagcatcttt gaaaggaacg gttaacaaga agaaacggtt
     1921 agctaatgaa tctgcttga
//
LOCUS       XM_071833118             951 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides putative F-box protein
            At4g21240 (LOC139843033), mRNA.
ACCESSION   XM_071833118
VERSION     XM_071833118.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..951
                     /gene="LOC139843033"
                     /note="putative F-box protein At4g21240; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139843033"
     CDS             1..951
                     /gene="LOC139843033"
                     /codon_start=1
                     /product="putative F-box protein At4g21240"
                     /protein_id="XP_071689219.1"
                     /db_xref="GeneID:139843033"
                     /translation="MVVESPPWTVFNSFGSEAKGSGRNKFINYYNLHKLNHHGVDYDD
                     MSLLASLDGLVCVAMNHNGDLGLWNPLTNIHKKLPKPKPKGFNGYRDAIGLYKDDSVD
                     LDYKILHVNSLRGYNIYSRRLDSWRNNFQLQDRRIISTCHKWSPGTFFRESLYFTVKD
                     KCLIISFDVKAEIFREIQYPHDPPVPGYGNLVVVKGWLHLCVGDTNKIDMLRIVIDDD
                     KCEWIKVVSYSGKHQQMPFRWSLRYLDKNGKFVVTWEHTKKKKSADSDDEGEFTQDEL
                     CLYSGKLQGVFYVESRVAESQFQNEEKRSLFTHHIKFALR"
     misc_feature    148..786
                     /gene="LOC139843033"
                     /note="F-box protein interaction domain; Region:
                     F_box_assoc_1; TIGR01640"
                     /db_xref="CDD:273726"
ORIGIN      
        1 atggttgttg aatctccacc atggactgtt tttaattcgt ttggttctga agccaaggga
       61 agtggaagaa acaagtttat caattactat aatttacata agcttaatca tcatggtgtt
      121 gattacgatg atatgtccct tttagcaagc ttggatggat tggtatgtgt agcaatgaat
      181 cacaatggcg acttagggtt atggaatccg ttaactaata tccacaaaaa attgccaaaa
      241 cccaaaccta agggttttaa tggttataga gatgctatcg gtttatataa agacgactct
      301 gttgatctcg attacaaaat tttacatgta aattcattac gtggttataa tatatactcc
      361 cggagattag attcatggag aaataatttt caacttcagg accgtcgaat aatttcgact
      421 tgtcacaagt ggtccccagg tactttcttc cgcgaaagtc tctatttcac ggttaaagat
      481 aaatgcttga ttatcagttt tgacgtgaag gcggaaatat ttcgggaaat acaatatcca
      541 catgatccac ccgttcctgg ttatgggaat ttagtagttg tgaaaggctg gcttcactta
      601 tgtgttgggg acacaaacaa aatcgatatg ttgcggatcg taattgatga tgataaatgc
      661 gaatggataa aggtggtttc gtattcaggc aaacatcaac aaatgccatt tagatggagc
      721 ttaagatatc tagataagaa tgggaagttt gttgtaactt gggagcatac gaagaagaag
      781 aagtcggctg attcggatga tgaaggcgaa ttcacgcagg acgagttgtg tttgtattcg
      841 gggaagttac aaggagtgtt ttatgtagag tctcgtgtcg ccgaatccca atttcaaaac
      901 gaagaaaaac gatccttgtt tacacaccac atcaaattcg ctcttcgata g
//
LOCUS       XM_071833119            1056 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides homogentisate
            phytyltransferase 1, chloroplastic-like (LOC139843034), mRNA.
ACCESSION   XM_071833119
VERSION     XM_071833119.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1056
                     /gene="LOC139843034"
                     /note="homogentisate phytyltransferase 1,
                     chloroplastic-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:139843034"
     CDS             1..1056
                     /gene="LOC139843034"
                     /codon_start=1
                     /product="homogentisate phytyltransferase 1,
                     chloroplastic-like"
                     /protein_id="XP_071689220.1"
                     /db_xref="GeneID:139843034"
                     /translation="MEHYDVKFGRLNPLKRHTRRADFSASANSEFSDRAHDYGAFRPQ
                     LHGELLRAMLNIIYKYSRVYTIKGTALSIISVSLLAVRSLSDITPSFFVGVLQALVGG
                     VLANLYVVGINQLSDIEIDKVNKPYLVLASGELPVKVAVLLTSLYAFLGFCLGWSVKS
                     WPFRLGLFLWYAFGTAYSVHLPLLRWKRIPVLAAMCIWSVQGAIVPILLHLHVQTYIT
                     GQTVFLSKHAIFVSGIMSIYAIVIALFKDVPDVEGDKINGINSLASQVGQKRVFWICI
                     WLLEMVYGVAILTGLLSARFWIRLIMVIGHSILGFVLWRNANLVNLVNNEATESFYLF
                     IWKLYYAEYLLVPILRF"
     misc_feature    211..1050
                     /gene="LOC139843034"
                     /note="UbiA family of prenyltransferases (PTases); Region:
                     PT_UbiA; cl00337"
                     /db_xref="CDD:469727"
ORIGIN      
        1 atggagcatt atgatgtcaa atttgggaga ttaaatcctc taaaacgcca cacacgtaga
       61 gcagattttt cggcgagtgc caactctgaa ttttcagaca gagcacacga ttatggagct
      121 tttcgtcctc aattgcatgg tgaattactt agagctatgt tgaatattat ctacaaatac
      181 tcgagagttt acactattaa aggaacggcc ttgtctatta tttcagtctc attgcttgcc
      241 gtccgtagcc tttcagatat tactccgtcg ttctttgttg gagttttgca ggcactcgtt
      301 ggtggtgttt tggctaattt atatgttgtg ggcataaatc aactgtctga tattgaaatc
      361 gacaaagtta acaaaccata tttggtgttg gcatcaggcg aacttcctgt caaagttgcc
      421 gttctactca cctcgttgta tgcttttttg ggattttgtt taggatggag tgttaaatca
      481 tggcctttta ggttgggtct cttcttatgg tatgcttttg gtactgcata ttcagttcat
      541 ctacccttgc tacgatggaa gaggattcct gtgcttgccg caatgtgtat ttggtctgtt
      601 caaggagcta ttgttcctat tctgctccac ctccacgttc agacatacat aactggacaa
      661 acggttttcc tttcgaagca tgccatcttt gtatctggaa tcatgagcat ctacgcgata
      721 gttatagcac tatttaagga tgttcccgat gtggagggtg acaagattaa tggaattaac
      781 tcccttgctt ctcaagtcgg ccaaaaacgt gttttttgga tttgtatatg gcttttggaa
      841 atggtatacg gtgtggctat attaaccggg ttgttatcag caaggttttg gatccgattg
      901 attatggtaa ttggtcatag tattcttggt tttgtgttgt ggagaaatgc gaacctggtt
      961 aatctcgtaa acaatgaggc cactgaatca ttctaccttt ttatttggaa gctatattac
     1021 gcggagtatt tattggtacc catattacga ttttaa
//
LOCUS       XM_071833120            1299 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843035), mRNA.
ACCESSION   XM_071833120
VERSION     XM_071833120.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1299
                     /gene="LOC139843035"
                     /note="uncharacterized LOC139843035; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:139843035"
     CDS             1..1299
                     /gene="LOC139843035"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689221.1"
                     /db_xref="GeneID:139843035"
                     /translation="MSSRLRGSNSDSEDLRIVQLIQEIEDDDSEVESAPSIPRVRGYI
                     PREREVAAQRLWDDYFCETPKYPQRKFKRRFRMRIQLFLRIVQGITIFQSDNMPEYFT
                     YFSQRFDAIGRPTFTILQKCTSAIRQLAYDTAPDMWDEYLQMSEQTSILCLDYFCMCI
                     ITLYKKEYMRSPNAHDVARLYSAHEERHGFRGMLGSIDCMHWEWRNCPVALKGQYARG
                     DHKKPTLMLEAVASYDLWIWHAFFGMAGSNNNINVLNQSPIFDKLKNETFPSAPFEVN
                     GHEYSKGYYLADGIYPDWATLVKGYSCPTEEPTIKFTRFQASARKDVERAFGVLQGRF
                     HIIRIASRSMSVNMMRRVMECCLILHNMILEDNGFALSKWEERFTTEEMENGMERIRN
                     RGRDRDTIAREIRDRDLHNQLTEDLVEHIWNLPPTFRNAN"
     misc_feature    499..1104
                     /gene="LOC139843035"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgagttcga ggttacgggg gtctaattct gactccgaag atttgcggat tgttcaatta
       61 attcaagaaa tagaagatga tgattccgaa gtcgaatcgg caccatctat tccgagagtt
      121 agaggttaca tccctaggga acgggaggtt gctgcacaac gtttgtggga tgattatttt
      181 tgtgagacgc caaaatatcc acaaagaaaa tttaaacgcc gttttcgcat gcgcatacaa
      241 ttatttctcc ggatagtgca aggtattact attttccaaa gtgataatat gccagaatat
      301 tttacttact tttctcaacg atttgatgct atcggtaggc ctacatttac tattttacaa
      361 aaatgtacgt cggctatacg tcaattggcg tatgacaccg ctcccgatat gtgggatgaa
      421 tatttgcaaa tgagtgagca aacatcaata ctatgtctag attacttttg tatgtgtata
      481 attacattgt acaaaaaaga atacatgcga tctccgaatg cacacgatgt tgctagattg
      541 tatagtgctc acgaggagag acatgggttt aggggtatgc tcgggagtat agattgtatg
      601 cactgggagt ggaggaattg tcctgttgct ttaaaaggac aatacgctag gggtgatcac
      661 aagaaaccaa cccttatgct tgaagctgtt gcttcttatg acttgtggat ttggcatgct
      721 ttttttggga tggcgggttc caacaataat atcaacgttt tgaaccaatc acctatattt
      781 gataaactta agaacgaaac atttccatcc gcaccatttg aggtaaatgg gcatgaatat
      841 agcaaaggat attaccttgc ggatggtata tatcccgatt gggcaacttt agttaaagga
      901 tattcatgtc ctactgaaga accaacgatt aagtttacaa gatttcaagc tagtgcccga
      961 aaggatgtag aaagggcatt tggggttctt caaggtcgtt ttcatattat acgcatagct
     1021 tcacgaagta tgagcgttaa catgatgcga agagtgatgg aatgttgtct catattacat
     1081 aacatgatac ttgaagataa cggctttgca ctttctaaat gggaagaaag attcactacc
     1141 gaagaaatgg aaaatggtat ggaacgtata cgaaatagag gacgagatcg agataccatt
     1201 gcaagagaaa taagggatcg agatttgcac aaccaactca ccgaggattt agtcgagcat
     1261 atttggaacc ttccaccgac ttttcgcaat gcgaattag
//
LOCUS       XM_071833121             873 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843036), mRNA.
ACCESSION   XM_071833121
VERSION     XM_071833121.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..873
                     /gene="LOC139843036"
                     /note="uncharacterized LOC139843036; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:139843036"
     CDS             1..873
                     /gene="LOC139843036"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689222.1"
                     /db_xref="GeneID:139843036"
                     /translation="MVLNTNSRNCSVWMWSSIQKNELEFRILNINVPNSFTKKRFNGR
                     ETLIWKDLWLDNQLLCERFGRLFRLDANEDSTLAERMTITEKDMWTLTLQNNGCFSSS
                     ALNKIRNEHLLPPPINRSPTMRNNALPQKIGVFIWRAHMGRLPIRVELDKRGTDLDWV
                     LCALCKNEIETGDRVLRSCTFAKDIWKRVLSWWKNNSQMYSSVADMFRGMKDNQASNE
                     FLKIWQTIEWVVGYSLWKKRNSKLFRRNMLIAPVVFNEIQSTNYQWILNRSKKLDLDW
                     NQWLLNPDVYDDHG"
     misc_feature    298..555
                     /gene="LOC139843036"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggtattga acacaaattc gagaaattgt tcagtgtgga tgtggagttc tatccaaaaa
       61 aatgagttag aatttcgaat attaaacatc aatgttccaa actctttcac gaaaaaaaga
      121 tttaatggtc gtgagacact aatttggaag gatttgtggc ttgataacca attgttgtgc
      181 gagaggttcg gcaggctttt caggttagat gcaaatgaag attcaacgct tgcagaaaga
      241 atgacaataa cagaaaagga catgtggacc ttgacattac aaaacaatgg ttgcttctct
      301 tcgagtgccc taaacaagat tcggaatgag catctactac cacctcctat taaccggagc
      361 ccaaccatgc gcaataacgc cttgcctcaa aaaattggcg tgttcatttg gagggctcat
      421 atgggaaggt tacctattcg ggtggagtta gataaaaggg gaacagacct tgactgggtt
      481 ctttgtgcat tatgcaaaaa cgagattgaa acaggggacc gtgtgttacg atcgtgcacc
      541 tttgcaaaag atatttggaa gagagttcta tcgtggtgga aaaacaactc gcaaatgtac
      601 tcctccgtgg cagatatgtt tcgaggtatg aaggataatc aagcatcaaa tgaattttta
      661 aaaatatggc aaacaataga atgggttgtg ggatattcac tatggaaaaa acgcaactcg
      721 aagttgttca gacgcaatat gttgattgcc ccggtcgttt tcaacgagat tcaatcaaca
      781 aactatcaat ggatcttaaa tcgttcgaaa aagttagatt tagattggaa tcaatggctt
      841 ctcaaccccg acgtttatga tgatcatggt tga
//
LOCUS       XR_011757457            1335 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139843037), transcript variant X1, ncRNA.
ACCESSION   XR_011757457
VERSION     XR_011757457.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1335
                     /gene="LOC139843037"
                     /note="uncharacterized LOC139843037; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139843037"
     ncRNA           1..1335
                     /ncRNA_class="lncRNA"
                     /gene="LOC139843037"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /db_xref="GeneID:139843037"
ORIGIN      
        1 tcaaatcgtt ttatgaacaa tcgattcaaa taacccatgg ttctatttca agacgctgat
       61 atgtcgttta gaaggattac gaatcgacat acaatatgtt gcaacttttg ctgttgaatg
      121 gaaatagtca tactctatat tatatagcat aagaagaagg atatggtact caccctatgg
      181 acgaacacct tagttatgga cgagcttgct ctttcaggta gatggcctac tgatgcttca
      241 accatttaac agctggtgga tgacttttat aaagtaattt tttaaatgtt gatgaggact
      301 tcaaagggtt tctttgttat attccaagat acaaaagcta tttctaatga tattataacg
      361 ctcttatcca gggaatcagg atagatgtag ataatgaatt tgttcctgta agatattaat
      421 cagaaagcaa tgaagatgag ggcgtatttt atgaagttgt gactttgaaa gtttattgat
      481 gtaccattaa caatgtttca tcactaactg tacaggctgc cttaagtttg tggggaactg
      541 tcattgagct tcattagact catcatgata gcggttgtag gaattgcagc cagcacgcgt
      601 gacctatcgt ctttgctttc attaataaag ctgaaatgcc ttacggtgag aagaggttag
      661 atggttaaag caaggatggt aaaagccttg attctgaagg tcaccgcaag tacatctatg
      721 gtggccacat tgccgcctac ttgaacgtga gcacttctca tggttttttg ttcctttcac
      781 ttatatatgt gtacatcatt tttttttatg tatatacata acctttttaa ctgttagtca
      841 tgtttgtttt ataaaatacc tatttattgt tagtcacgtt cgttcactta tatatgttct
      901 cgtgtatcag tttgtcctta atttatcttt tcttgaatga acatatgttg atcgaaaatg
      961 aaccagagaa ataccagaaa cagtcttcta actaaatcaa gtctcggttt gaaccagata
     1021 gccttgaaga ggtttacaaa aaggtccatg ctgccattcg tgttgatcct tgccccaaga
     1081 ctttatttcc atggcttagc tctcgcctca gaattgatcg taatgtcata ctttctttta
     1141 tctctatttt ggagagatac tgtcaagaga cggatgccaa aaaggtacta aacaactcaa
     1201 ttacctcaaa cacctcatgt ttgtaaggtt tttctaagtt atgtaaacac gttgaagatt
     1261 agtaagtatc taaatatgtt aggtaaattt gtatattttt tcaaattcaa aaaacttgat
     1321 ttatatcaac tcatt
//
LOCUS       XR_011757458            1191 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139843037), transcript variant X2, ncRNA.
ACCESSION   XR_011757458
VERSION     XR_011757458.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1191
                     /gene="LOC139843037"
                     /note="uncharacterized LOC139843037; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139843037"
     ncRNA           1..1191
                     /ncRNA_class="lncRNA"
                     /gene="LOC139843037"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:139843037"
ORIGIN      
        1 tcaaatcgtt ttatgaacaa tcgattcaaa taacccatgg ttctatttca agacgctgat
       61 atgtcgttta gaaggattac gaatcgacat acaatatgtt gcaacttttg ctgttgaatg
      121 gaaatagtca tactctatat tatatagcat aagaagaagg atatggtact caccctatgg
      181 acgaacacct tagttatgga cgagcttgct ctttcaggta gatggcctac tgatgcttca
      241 accatttaac agctggtgga tgacttttat aaagtaattt tttaaatgtt gatgaggact
      301 tcaaagggtt tctttgttat attccaagat acaaaagcta tttctaatga tattataacg
      361 ctcttatcca ggctgcctta agtttgtggg gaactgtcat tgagcttcat tagactcatc
      421 atgatagcgg ttgtaggaat tgcagccagc acgcgtgacc tatcgtcttt gctttcatta
      481 ataaagctga aatgccttac ggtgagaaga ggttagatgg ttaaagcaag gatggtaaaa
      541 gccttgattc tgaaggtcac cgcaagtaca tctatggtgg ccacattgcc gcctacttga
      601 acgtgagcac ttctcatggt tttttgttcc tttcacttat atatgtgtac atcatttttt
      661 tttatgtata tacataacct ttttaactgt tagtcatgtt tgttttataa aatacctatt
      721 tattgttagt cacgttcgtt cacttatata tgttctcgtg tatcagtttg tccttaattt
      781 atcttttctt gaatgaacat atgttgatcg aaaatgaacc agagaaatac cagaaacagt
      841 cttctaacta aatcaagtct cggtttgaac cagatagcct tgaagaggtt tacaaaaagg
      901 tccatgctgc cattcgtgtt gatccttgcc ccaagacttt atttccatgg cttagctctc
      961 gcctcagaat tgatcgtaat gtcatacttt cttttatctc tattttggag agatactgtc
     1021 aagagacgga tgccaaaaag gtactaaaca actcaattac ctcaaacacc tcatgtttgt
     1081 aaggtttttc taagttatgt aaacacgttg aagattagta agtatctaaa tatgttaggt
     1141 aaatttgtat attttttcaa attcaaaaaa cttgatttat atcaactcat t
//
LOCUS       XR_011757459            1331 bp    RNA     linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized lncRNA
            (LOC139843037), transcript variant X3, ncRNA.
ACCESSION   XR_011757459
VERSION     XR_011757459.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="transcribed RNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1331
                     /gene="LOC139843037"
                     /note="uncharacterized LOC139843037; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139843037"
     ncRNA           1..1331
                     /ncRNA_class="lncRNA"
                     /gene="LOC139843037"
                     /product="uncharacterized lncRNA, transcript variant X3"
                     /db_xref="GeneID:139843037"
ORIGIN      
        1 tcaaatcgtt ttatgaacaa tcgattcaaa taacccatgg ttctatttca agacgctgat
       61 atgtcgttta gaaggattac gaatcgacat acaatatgtt gcaacttttg ctgttgaatg
      121 gaaatagtca tactctatat tatatagcat aagaagaagg atatggtact caccctatgg
      181 acgaacacct tagttatgga cgagcttgct ctttcagatg gcctactgat gcttcaacca
      241 tttaacagct ggtggatgac ttttataaag taatttttta aatgttgatg aggacttcaa
      301 agggtttctt tgttatattc caagatacaa aagctatttc taatgatatt ataacgctct
      361 tatccaggga atcaggatag atgtagataa tgaatttgtt cctgtaagat attaatcaga
      421 aagcaatgaa gatgagggcg tattttatga agttgtgact ttgaaagttt attgatgtac
      481 cattaacaat gtttcatcac taactgtaca ggctgcctta agtttgtggg gaactgtcat
      541 tgagcttcat tagactcatc atgatagcgg ttgtaggaat tgcagccagc acgcgtgacc
      601 tatcgtcttt gctttcatta ataaagctga aatgccttac ggtgagaaga ggttagatgg
      661 ttaaagcaag gatggtaaaa gccttgattc tgaaggtcac cgcaagtaca tctatggtgg
      721 ccacattgcc gcctacttga acgtgagcac ttctcatggt tttttgttcc tttcacttat
      781 atatgtgtac atcatttttt tttatgtata tacataacct ttttaactgt tagtcatgtt
      841 tgttttataa aatacctatt tattgttagt cacgttcgtt cacttatata tgttctcgtg
      901 tatcagtttg tccttaattt atcttttctt gaatgaacat atgttgatcg aaaatgaacc
      961 agagaaatac cagaaacagt cttctaacta aatcaagtct cggtttgaac cagatagcct
     1021 tgaagaggtt tacaaaaagg tccatgctgc cattcgtgtt gatccttgcc ccaagacttt
     1081 atttccatgg cttagctctc gcctcagaat tgatcgtaat gtcatacttt cttttatctc
     1141 tattttggag agatactgtc aagagacgga tgccaaaaag gtactaaaca actcaattac
     1201 ctcaaacacc tcatgtttgt aaggtttttc taagttatgt aaacacgttg aagattagta
     1261 agtatctaaa tatgttaggt aaatttgtat attttttcaa attcaaaaaa cttgatttat
     1321 atcaactcat t
//
LOCUS       XM_071833122            1023 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00810-like (LOC139843038), mRNA.
ACCESSION   XM_071833122
VERSION     XM_071833122.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1023
                     /gene="LOC139843038"
                     /note="uncharacterized mitochondrial protein
                     AtMg00810-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139843038"
     CDS             1..1023
                     /gene="LOC139843038"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /protein_id="XP_071689223.1"
                     /db_xref="GeneID:139843038"
                     /translation="MWILHHKIRSDGTFERYKARLVGDGRSQQVGIDCYETFSPVVKP
                     ATIRTVLSIAISKEWPIYQLDVKNAFLHGNLNETVYILKQAPRAWYQRFADFASKVGF
                     QHSQCDHSLFIYHRGRDIAYLLLYVDDIVLTTSSDELRSKLMVLFSHEFAMKDLGPLS
                     SFLGISVTRHATGLFLTQHAYATDIINRVGMKTCNAVTTPVDTLGKMSTSDSPLISNP
                     TEYRSLAGGLQYLTFTRPDISYAVQQICLHMHDPHENHLLALKRIIRYLQGTSALGLH
                     ISKSTSHNLVGFTDADWAGCPDTRRSTSGYCVYLGEIYCPGHQNDKLLCLVLVPKPNI
                     GVFLTW"
     misc_feature    4..603
                     /gene="LOC139843038"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); Region: RVT_2; pfam07727"
                     /db_xref="CDD:400190"
     misc_feature    856..>933
                     /gene="LOC139843038"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; Region: RNase_H_like; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 atgtggattt tacatcacaa aattagatca gatggcacgt ttgaacgata caaagcaagg
       61 cttgtcggcg atggtcgctc acaacaggtt ggtattgatt gttatgaaac ttttagccca
      121 gtcgttaaac ctgctactat ccgaactgtg ctcagtattg caatctctaa agaatggccg
      181 atttatcaac ttgatgtgaa aaacgcattt cttcatggga atttaaatga gaccgtttat
      241 attttaaagc aagcccctcg cgcttggtat caacgtttcg cggactttgc ttccaaagtt
      301 ggttttcaac acagtcaatg tgatcactct ttgttcattt atcatcgtgg ccgagatatt
      361 gcatatttat tattatacgt tgatgacata gtccttacta catcttcaga tgagttgcga
      421 tcaaaactaa tggttctttt ctctcatgaa ttcgccatga aggaccttgg ccccttgagc
      481 tcttttttag gcatttcggt cactagacat gccactggtt tatttttgac tcaacatgcc
      541 tatgcaactg atattataaa tagggtcgga atgaaaactt gcaatgcagt taccacgcct
      601 gttgacactc ttggtaagat gagcacgtcc gatagtcccc ttatttctaa tcctacagaa
      661 tatagaagtc ttgccggtgg cctacaatat cttactttta cacgccccga catctcatac
      721 gcggttcagc aaatttgtct tcacatgcat gatcctcatg agaaccatct tcttgctttg
      781 aaaagaatta ttcgatatct tcaagggacc tctgctctcg gcttgcatat ttcgaagtcc
      841 acatctcaca acttagttgg ctttaccgat gctgattggg ccggatgtcc cgatactcgt
      901 cgctctactt caggttattg cgtttatttg ggtgaaattt attgtcctgg tcatcaaaac
      961 gacaagctac tttgtctcgt tctagtgccg aagccgaata taggggtgtt tctaacgtgg
     1021 tag
//
LOCUS       XM_071833123             624 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein ALP1-like
            (LOC139843039), mRNA.
ACCESSION   XM_071833123
VERSION     XM_071833123.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..624
                     /gene="LOC139843039"
                     /note="protein ALP1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins"
                     /db_xref="GeneID:139843039"
     CDS             1..624
                     /gene="LOC139843039"
                     /codon_start=1
                     /product="protein ALP1-like"
                     /protein_id="XP_071689224.1"
                     /db_xref="GeneID:139843039"
                     /translation="MLEAVVSYDMWIWYSFFGMAGSNNDMNVLNHSPLFDSLKKDRAA
                     PSPFEVNGHVYPFGYYLADGIYPDWTTLIKGYSTPIDEPRVKFTRFQASARKDVERTF
                     GVLQGRFAILKTPARVMSVNKMRRIMYSCIVMHNMIQEDNGFALSTWEQEWLDKPENK
                     PRRNIRRRVKDRRSREKEIWDRNVHDQLREDLTAYIWNLPQNFRSTS"
     misc_feature    <4..429
                     /gene="LOC139843039"
                     /note="Transposase DDE domain; Region: DDE_Tnp_1_3;
                     cl46860"
                     /db_xref="CDD:481200"
ORIGIN      
        1 atgcttgaag cggttgtttc atacgatatg tggatatggt attcgttttt tgggatggct
       61 ggttcaaaca acgacatgaa tgtgttgaat cattctcctt tgtttgattc actcaaaaag
      121 gatagagctg caccgtctcc gtttgaagta aacggacacg tctatccgtt tggttactac
      181 ttggcggatg ggatatatcc tgattggaca accttaataa agggatattc gacgcctatt
      241 gatgagccac gagtcaaatt tactagattt caagcgagtg ctcgaaagga cgtagagcgt
      301 acatttggtg ttttacaagg taggtttgca attttaaaaa ctccggcacg agttatgagc
      361 gttaacaaga tgagaaggat aatgtatagt tgtattgtta tgcacaacat gatacaagaa
      421 gataacggtt ttgccttaag tacttgggaa caagaatggt tagataaacc cgaaaacaag
      481 ccccgtcgta atattaggag aagagtcaaa gatcgtagat cacgagaaaa ggaaatttgg
      541 gatcgaaacg tacacgatca actacgtgaa gatttaacag cttatatttg gaacctccca
      601 caaaactttc gttctacaag ctag
//
LOCUS       XM_071833124             540 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843040), mRNA.
ACCESSION   XM_071833124
VERSION     XM_071833124.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..540
                     /gene="LOC139843040"
                     /note="uncharacterized LOC139843040; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139843040"
     CDS             1..540
                     /gene="LOC139843040"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689225.1"
                     /db_xref="GeneID:139843040"
                     /translation="MEFLSASLDLLFDSTSSDEEEENEPRRTRVQRNPRRVINRDREA
                     ASLLLWNDYFSQNPTFPDDVFKRRFRMRINLFLRIKDGILNHSYTNNAPQHFVFFQQR
                     PDPLGRLGFTTYQKITCALHQLAYGTSADIFDEYIKMAEKTGCVYLNNFCKGIIDLYG
                     REYLRKPTATDVARLYSAH"
ORIGIN      
        1 atggagtttt tatccgcgag tcttgatttg ttattcgata gcacctcgtc cgacgaagag
       61 gaagaaaacg aacctagaag aactcgggtg caacggaacc cacgacgtgt tattaataga
      121 gatcgtgaag ctgcgagtct ccttttgtgg aacgactact tttcgcaaaa tccgacgttt
      181 ccagacgacg ttttcaagag acgatttcgg atgcgaatta atttatttct ccgtatcaaa
      241 gacggtattc tcaatcactc ttatactaat aatgcacctc aacactttgt atttttccaa
      301 caacgtccgg atccactcgg ccgactaggt tttacaacgt atcaaaaaat aacttgcgcg
      361 ttacaccaat tggcgtatgg aacaagcgct gatatttttg atgaatatat aaaaatggcg
      421 gagaaaacgg gatgtgttta cttaaataat ttttgcaagg gtataattga tttatatggc
      481 cgagaatatt tgcggaagcc gacggcaact gacgttgctc ggttgtattc ggcgcactag
//
LOCUS       XM_071833125            1353 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides cold-responsive protein
            kinase 1-like (LOC139843042), mRNA.
ACCESSION   XM_071833125
VERSION     XM_071833125.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1353
                     /gene="LOC139843042"
                     /note="cold-responsive protein kinase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:139843042"
     CDS             1..1353
                     /gene="LOC139843042"
                     /codon_start=1
                     /product="cold-responsive protein kinase 1-like"
                     /protein_id="XP_071689226.1"
                     /db_xref="GeneID:139843042"
                     /translation="MAIQDDDDDEKKDAISSNEDSSAKKHHSSPMLFFLGGLIVLLIL
                     LIILYFFWKFVRPAQLKKSEKRENMCKVELIIFFVASKGYFSGNLRTISCFTFQALKK
                     ATKNFHECNFLGKGGFGPVYLGKLQDGRLVAVKKLSLDKSQQGDAEFLAEVQMITSIQ
                     HKNLVRLLGCCSEGPQRILVYEYMKNKSLDLIIYGQNNQYLNWSTRFQIILGIARGLQ
                     YLHEDSHIRIVHRDIKASNILLDAKFQPRIGDFGLARFFPEDQAYLSTAFAGTLGYTA
                     PEYAIKGELSEKADIYSFGVLVLEIISCRKNTDLTLPLEMQYLPEYAWKMYEKSKMDN
                     LIDPRMQNDGYVEKDVMQTIRVALLCLQPHANLRPPMSEIVSMLTWKVEMVKSPIKPT
                     FLEGGRRTKVDDKQTWEVISDYFPSSIISESPNLTQPPNSIDFSVSQSISTNFGTNLV
                     "
     misc_feature    337..1137
                     /gene="LOC139843042"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; Region: STKc_IRAK; cd14066"
                     /db_xref="CDD:270968"
     misc_feature    order(337..351,361..363,397..399,403..405,493..495,
                     541..552,562..564,568..570,694..696,700..702,706..711,
                     715..717,748..750,757..759,808..819)
                     /gene="LOC139843042"
                     /note="active site"
                     /db_xref="CDD:270968"
     misc_feature    order(337..351,361..363,397..399,403..405,493..495,
                     541..552,562..564,694..696,700..702,706..711,715..717,
                     748..750)
                     /gene="LOC139843042"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(349..351,562..564,568..570,694..696,700..702,
                     706..708,757..759,808..819)
                     /gene="LOC139843042"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:270968"
     misc_feature    order(745..768,796..819)
                     /gene="LOC139843042"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:270968"
ORIGIN      
        1 atggcgatac aagatgatga tgatgatgag aaaaaggatg caatatcgtc taatgaagat
       61 agctccgcta agaaacacca ttcatcgccc atgttgtttt tccttggagg gctaattgtg
      121 ctgctaatat tgttgattat cttatacttt ttctggaaat ttgtcagacc agcacaactt
      181 aaaaagtccg aaaagcgtga aaacatgtgc aaagttgaac tgatcatttt ttttgtggct
      241 tcaaaaggtt atttcagtgg aaaccttagg acgataagct gttttacatt ccaagcgcta
      301 aagaaggcga ctaaaaactt ccatgaatgt aactttcttg gaaaaggtgg ttttgggccc
      361 gtctatttgg gtaagttaca agatgggaga ctagttgcgg taaagaaact ttctcttgat
      421 aaatcacaac aaggagatgc agaattttta gcagaggtgc aaatgatcac tagcatacaa
      481 cacaagaacc ttgtacgtct tcttggttgt tgctccgagg gacctcaacg aatacttgta
      541 tatgaataca tgaagaacaa gagtcttgac ctcataattt atggccagaa caatcagtac
      601 ctgaactgga gcacacgttt tcaaataatt ttgggtattg ctcggggatt acagtaccta
      661 cacgaggact cacacatcag aatcgtacac agagatatca aagccagtaa cattcttctt
      721 gatgctaagt ttcaacctag aatcggagat tttggcctcg caaggttctt tcctgaggat
      781 caagcttatc tcagcacagc atttgctggc acacttggtt atacagcccc ggaatacgct
      841 attaaaggag aactatccga aaaagctgac atatacagtt ttggagttct ggttctcgaa
      901 attattagct gcaggaaaaa tactgatctt actttaccat tagaaatgca ataccttcct
      961 gaatatgcgt ggaagatgta cgaaaagtca aagatggaca atcttataga tccgagaatg
     1021 cagaacgatg gttatgtgga gaaagatgta atgcaaacga ttcgtgtggc tttattatgc
     1081 cttcaacctc atgcaaactt aagaccgccg atgtcagaga ttgtatcgat gctgacgtgg
     1141 aaggtcgaaa tggttaagtc accgataaaa ccaacgtttt tggaaggagg aagacgcacg
     1201 aaggttgatg ataagcaaac ttgggaagtc atctcggatt atttcccttc ttctatcata
     1261 agtgaatcac ctaacttgac ccaacctcca aactctatag atttcagcgt tagccaaagc
     1321 atttcaacca actttggtac gaatttggtc tga
//
LOCUS       XM_071833126            1966 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides FRIGIDA-like protein 3
            (LOC139843044), mRNA.
ACCESSION   XM_071833126
VERSION     XM_071833126.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1966
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1966
                     /gene="LOC139843044"
                     /note="FRIGIDA-like protein 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:139843044"
     CDS             148..1710
                     /gene="LOC139843044"
                     /codon_start=1
                     /product="FRIGIDA-like protein 3"
                     /protein_id="XP_071689227.1"
                     /db_xref="GeneID:139843044"
                     /translation="MEDGDSVVTLMESTSSKIQQLQKAFAELESHRAVTLNLKWIQIE
                     EHFHGLEKSLKRRFTELEDQEKEFELKTIQSQKVLEKRRAAVKVKEEASLARLQEKRD
                     VALTSIYKIIGKNKNDVTNEVPILDKLFENRDEKQLTNPELAKLCKEMDARGLHKFIS
                     DNRKNLVSIKEEIPVALKSAGDPGGLVLDSLCDFYITEVSNVDGKKDSNLLGIRRTCI
                     MLMECLSALLANVDESTVSKMITENVKNRAKIIAQEWKPKLDDLDLDASNGNSLEAHA
                     FLQLVATFGIDSEFVHDDLSKLIPMISRRHQAADLCRFLGLSDKMPGVIDVLVNSGRH
                     IDAVNLAFSFELTEQFSPVTLLKSYLADAIKVPSTVKPGSSSPSSQNDVGEKELSALK
                     AITKCIEEHKLEDQYPLDPLLKRILHLEKVKADIKRATEVPQSKRPRATGVIAGYGPR
                     NTIDTTDKNIYATRYAPPTQYVYENKFPTYVYPGPPENHVHSFMGTTYTITPNHGTYF
                     GNGYQYQAPYLH"
     misc_feature    568..1440
                     /gene="LOC139843044"
                     /note="Frigida-like protein; Region: Frigida; pfam07899"
                     /db_xref="CDD:462311"
     polyA_site      1966
                     /gene="LOC139843044"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaccaaaact ttgtcagaac tctgaactcc ctcttacata ctttcctctt ttcaacacac
       61 acccacacac aatatgactt gatcggaatc cataattctc ctccgtaaac caccgccgtc
      121 actttctact tccggtgatt acaaacaatg gaagatggag attcagttgt cacactaatg
      181 gagtctacaa gctccaaaat acaacaactt cagaaggcat ttgctgaatt agagagtcat
      241 cgagctgtaa cacttaactt gaaatggata caaatcgagg aacatttcca cgggctcgag
      301 aaatcattga aacggcgttt caccgagctc gaagatcaag aaaaggagtt tgaattgaaa
      361 acaattcaat cacaaaaagt attggaaaag cgtcgtgctg ctgttaaagt gaaagaagaa
      421 gcttcattgg cccgtcttca agaaaaaaga gacgttgcgc tcacttctat ctataaaatc
      481 atcggtaaaa acaaaaacga tgttactaat gaggttccta ttttggataa gttgtttgag
      541 aacagggacg agaagcagtt aacgaatccg gaacttgcga aattatgtaa agaaatggat
      601 gcaaggggac tgcataaatt catatcggat aatcgaaaga atcttgtttc gataaaggaa
      661 gagataccgg ttgcattgaa gtctgcaggt gaccccggtg gtctggtttt ggattcactt
      721 tgtgatttct acattacaga ggtttcgaat gtagatggta aaaaagattc aaatctttta
      781 ggtattcggc gaacgtgtat catgttgatg gaatgtctta gcgctcttct tgcaaatgtt
      841 gatgagagta ccgtttctaa gatgatcact gaaaatgtga agaaccgagc aaagattatt
      901 gcacaagagt ggaaaccgaa gttggatgat cttgatttgg atgctagtaa tgggaactcg
      961 ttggaggctc acgctttctt acaacttgtt gctacttttg gtattgattc agagtttgtt
     1021 cacgatgatt tgtctaaatt aataccgatg atctctcgtc gtcaccaggc ggcagacctt
     1081 tgccgcttcc tcgggttgtc tgacaagatg ccaggtgtga ttgatgtgtt ggtaaacagc
     1141 ggaaggcata tcgatgctgt taatctagca ttttcatttg agcttacgga gcagttttct
     1201 cctgttacgt tattgaaatc ctacttggca gatgcaatta aagtcccttc gactgtcaaa
     1261 ccaggaagct cttctccaag ttctcagaat gatgtcggtg aaaaagagct atctgccctg
     1321 aaggccatca ccaagtgcat agaagaacac aagcttgaag atcaataccc gttagaccca
     1381 cttctaaaac ggatcctcca tttagagaaa gtcaaagcag acataaagcg agcaacagaa
     1441 gttcctcaat ccaaacgacc ccgagctact ggagtaatag cgggatatgg gccccgcaac
     1501 accattgata ctaccgacaa aaacatctat gccacaaggt atgcaccgcc aactcagtac
     1561 gtgtatgaga acaaattccc gacctatgtt tatcctggac cacctgaaaa ccatgttcac
     1621 tcgtttatgg gtactactta caccataact cctaaccatg gaacctactt tggaaacggt
     1681 tatcagtacc aggcacctta tcttcactaa gtttataggc accatgaata aaaaaacttt
     1741 gatcatgatt ctctttaact tctacgtgtt aaccgttttg aattattcgt atgatgaact
     1801 caattcggaa aaatcatgaa aaaaatgaaa aaaaaaaaaa aaaaaaaatg tatttgtttg
     1861 tataagttga gcatattgta atcctttaac acatttattc tgttaattta agttgcatgt
     1921 tcgtcaatat ttatataaag tacagtctgg gatttaattt gttgaa
//
LOCUS       XM_071833127             729 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843045), mRNA.
ACCESSION   XM_071833127
VERSION     XM_071833127.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..729
                     /gene="LOC139843045"
                     /note="uncharacterized LOC139843045; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139843045"
     CDS             1..729
                     /gene="LOC139843045"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689228.1"
                     /db_xref="GeneID:139843045"
                     /translation="MTAPNTIFVWGWSRDPGGRTAGELQGLINMLSGYAFDLGNEDKW
                     KWTLASNGRFTVNSLSSQLDERILSGITSSHETYRNSLVPKKFEIFAWRVLKKRIRVR
                     LKLDKQGIDLHSVRCSICDDDLESVDHCLISCKYSMEVWNRVYSWWKIGSFSNLSIGE
                     ILRGNAPIPLTNFGRLIWQAVECVCAYYNWKNRNNLVFRGKSWTIPVMLNEIQSKSFE
                     WISQRLRKKIFNWHAWLSDPYIYL"
     misc_feature    <238..420
                     /gene="LOC139843045"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgactgctc caaatactat tttcgtatgg ggttggtctc gagatccagg tggccgtacc
       61 gcaggcgagt tgcaaggact tatcaacatg ttatcagggt atgcgtttga tctagggaat
      121 gaagacaaat ggaagtggac cttagcttca aatggacgat tcacagttaa ttctctttct
      181 tcacagcttg atgaacgaat actctcgggc atcacttcat cgcacgaaac atatcgcaat
      241 agtttggttc ctaaaaaatt tgaaatcttt gcgtggaggg tattgaagaa acgtatccgg
      301 gttagattga aacttgacaa acagggtatc gatctccatt ccgtccgatg ctcaatttgt
      361 gatgacgatt tagagagtgt ggaccactgc ctaatctctt gcaaatattc gatggaagtt
      421 tggaatagag tctatagttg gtggaagatt ggaagcttct caaatttaag tatcggcgag
      481 attcttcgag ggaacgctcc gattccattg acaaatttcg gaagattaat ttggcaagct
      541 gttgagtgtg tttgcgccta ctataattgg aagaatcgta acaacttagt cttccgtggg
      601 aaatcgtgga caatcccggt tatgttgaac gaaatacaat ccaagtcgtt tgaatggatt
      661 tcacaacggt tgcgaaaaaa gatcttcaat tggcatgcgt ggttgagtga tccttacatt
      721 tatctctga
//
LOCUS       XM_071833130             738 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843046), mRNA.
ACCESSION   XM_071833130
VERSION     XM_071833130.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..738
                     /gene="LOC139843046"
                     /note="uncharacterized LOC139843046; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139843046"
     CDS             1..738
                     /gene="LOC139843046"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689231.1"
                     /db_xref="GeneID:139843046"
                     /translation="MVKAFLKYQKCGYIPNYPIRNKIGNGQKFRFWKDCWVGNTPLCV
                     RFNRIYHLDPNPDCLVADKWVDGHWTFSWSHDISGGRSLSMIQEFQEIVDPIVLSNDP
                     DSKSWAASVNSTFSVKCIRDYIDNLLLPSHELYTRWVKILPRKINVFVWRMAMDRLPT
                     HLNLSKRGLEIDTIGCRNCNPGIESLNHTLFSCDIALEIWRKVGVWFNCGLPIFSSWS
                     DWLSWYDNWHVPVNIKCRLYVVMATSA"
     misc_feature    <412..597
                     /gene="LOC139843046"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atggttaaag ctttcttgaa atatcagaaa tgtggttaca tacctaatta cccaattcgt
       61 aacaagatag gtaatggaca aaaatttcgt ttttggaaag attgttgggt tggtaatact
      121 cccttatgtg ttcggttcaa tcgaatttat catttagatc ccaaccctga ttgtttagtt
      181 gcggataaat gggttgatgg gcattggact ttctcatggt ctcatgatat tagtggtggt
      241 cgtagtcttt ccatgattca agaatttcaa gaaattgttg accccattgt gttatccaat
      301 gatccagact ctaaatcatg ggctgcaagt gtgaattcta cgttttctgt taagtgtatt
      361 cgtgactata ttgacaatct gcttttgcct tcgcatgagc tttatacgag atgggtcaaa
      421 atattgccga ggaagattaa tgtgttcgtt tggaggatgg ctatggatcg tctccctacc
      481 catctcaatt tgtccaaaag aggtttagag attgatacta ttggatgtcg taattgtaac
      541 cctggtatcg aatctttaaa tcatactctt ttttcttgtg atattgcact ggagatttgg
      601 aggaaagttg gcgtttggtt taattgtggg cttcctatat tttcgtcctg gagcgattgg
      661 ttgtcttggt acgataattg gcatgttccg gttaacatca aatgtcgtct atatgtggtt
      721 atggctacat cggcttag
//
LOCUS       XM_071833131            1179 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides 3-hydroxyisobutyryl-CoA
            hydrolase 1-like (LOC139843047), mRNA.
ACCESSION   XM_071833131
VERSION     XM_071833131.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1179
                     /gene="LOC139843047"
                     /note="3-hydroxyisobutyryl-CoA hydrolase 1-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139843047"
     CDS             1..1179
                     /gene="LOC139843047"
                     /codon_start=1
                     /product="3-hydroxyisobutyryl-CoA hydrolase 1-like"
                     /protein_id="XP_071689232.1"
                     /db_xref="GeneID:139843047"
                     /translation="MAHSTQTEAQQVIFEEISGARKVILNRTKKLNCLNYDMLSKMHE
                     KLKLYENDPTVQLVILKANGNIFCAGGDLTSAIKFMALGHWSFGTSYYRKEFCLDYFL
                     ATYTKPMVAILNGSVMGGGVGISIHSTFRIVTENTIFAMPEASIGLFPDVGASYFLSR
                     LPGFFGEYIGLTGARLDGAEMVALGLGTHFVPSKNLKSMEKALENLVASSNAPTVAMM
                     SMIIDKFTEEVNIKPDSAYARLPMINQCFSGRSCEEILSTLEHLATEVQEKWIQNAIR
                     SMKSSTPIGLKIFLRTIREGRSKNIKQCLETEYIAISNLTSKKISLDLYEGSRAMLIE
                     KDKKPRWVPSKLEDASDDMVAKFFSISFNEYDDWIPLQLPSRSNEAAAAAAAASASKL
                     "
     misc_feature    58..1074
                     /gene="LOC139843047"
                     /note="Enoyl-CoA hydratase/isomerase; Region: ECH_2;
                     pfam16113"
                     /db_xref="CDD:465024"
ORIGIN      
        1 atggctcact caacccagac agaagcacaa caggtgattt tcgaagaaat atcgggagca
       61 aggaaagtaa tactaaaccg aacaaagaaa ctaaactgtc tcaactatga tatgctctcc
      121 aaaatgcacg agaaactgaa attgtacgag aatgatccaa ctgttcaact tgtgatattg
      181 aaggcaaacg ggaatatatt ttgtgccggt ggcgatctca cgtctgctat aaagtttatg
      241 gctcttgggc attggagttt tggaacgagc tattatcgga aagagttttg tttggactac
      301 ttccttgcaa cttatacaaa accaatggtt gcaattctaa atggaagcgt catgggagga
      361 ggcgttggaa tatcaataca ttcaacattt agaatcgtta ctgagaatac tattttcgca
      421 atgcctgagg catcgattgg gctatttcct gatgtcggtg catcttattt tttgtctcga
      481 cttcctggat tctttggaga gtacatcgga ttaactggtg ctcgattaga cggagcagag
      541 atggttgcac ttggtcttgg aactcatttt gttccatcca agaacttaaa atctatggag
      601 aaagctcttg aaaatttggt tgcttcatcg aatgcaccaa ccgtagctat gatgtctatg
      661 attattgata agttcacaga agaagtaaac atcaagccag atagtgcgta cgctaggctc
      721 cccatgatca accaatgctt ctccggaaga tcatgtgaag aaatattatc cacattggaa
      781 cacttggcta ctgaagttca agagaaatgg atccaaaatg caataagatc gatgaaatcc
      841 tcgactccaa taggtctcaa gattttcttg agaacgataa gagaaggtcg atccaaaaac
      901 atcaagcaat gtcttgagac cgagtacatt gctatctcta accttacaag caaaaagatt
      961 agcctcgact tatatgaggg ctctagagct atgttgatcg aaaaagataa gaaaccccgg
     1021 tgggtacctt caaaacttga agacgctagc gacgatatgg tggccaagtt tttttccata
     1081 agtttcaacg aatatgatga ttggattcct ttacaacttc catcaagatc taatgaagcc
     1141 gctgctgctg ctgctgctgc aagtgcatca aaactctag
//
LOCUS       XM_071833132             696 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843048), mRNA.
ACCESSION   XM_071833132
VERSION     XM_071833132.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..696
                     /gene="LOC139843048"
                     /note="uncharacterized LOC139843048; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139843048"
     CDS             1..696
                     /gene="LOC139843048"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689233.1"
                     /db_xref="GeneID:139843048"
                     /translation="MSVNGDDQELEALETLSLTDFPLTEARDSGFHEQLQRNSSSSAN
                     EDLFEFFKGEPCGYLEDDMMSHAEDIISDGKLIPINDQNQAHNKKKVHRRWSESMREL
                     ESTNNKETASQLVRNSHSLDYKKLSRKSKMNYEPTGEIHRNSLSNKSSSSRWTDLKFG
                     PLRVPHEMDLKNIRNRQIVQNTSKSLFPNGESNDRFMVTRVGNHQRKTSWGVLGILSC
                     KSSVSVAVTMPLS"
ORIGIN      
        1 atgagtgtca atggtgatga tcaagaactt gaagcactag aaacactttc actcactgat
       61 ttccccttaa cagaagctcg agattccggt tttcacgaac aactacaacg aaattcttct
      121 tcgtctgcta atgaagattt atttgagttc tttaaaggcg aaccgtgcgg ttatttagaa
      181 gatgacatga tgtctcatgc agaagatatc atttcagatg gaaaactaat tccaatcaac
      241 gatcaaaatc aagctcataa caagaaaaag gttcatcgaa ggtggtctga atcaatgcgc
      301 gagttagaga gcacaaacaa caaagaaaca gcgagtcaac tcgttagaaa cagccactct
      361 ttggattaca agaagttaag taggaaatca aagatgaatt atgaaccaac gggtgagatt
      421 catcgtaaca gtttaagtaa taaatcttct tcatcaagat ggacagacct taagtttggg
      481 ccgttaaggg tcccacatga gatggatctt aagaatataa ggaaccggca gattgttcaa
      541 aatacgtcca aatctttgtt tcctaacgga gagtcgaatg atcgttttat ggttactcgc
      601 gttggtaatc atcaacggaa aacatcatgg ggagtgcttg gaattcttag ttgtaaaagt
      661 tccgttagtg ttgccgttac gatgccgtta agttga
//
LOCUS       XM_071833133             789 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843049), mRNA.
ACCESSION   XM_071833133
VERSION     XM_071833133.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..789
                     /gene="LOC139843049"
                     /note="uncharacterized LOC139843049; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139843049"
     CDS             1..789
                     /gene="LOC139843049"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689234.1"
                     /db_xref="GeneID:139843049"
                     /translation="MGINFADSFLKSIGDGAETEFWGEPWLCDRPLKQKFTRLFHLEE
                     EPNIHVRDRITWIDRDAIFTENWRRTPSGRTLDDLNSLKALLNAYVKQDKTMDSWVWN
                     LAGNGLFTTKKLAAIIDDKLIGTGSNSNEEFMKNHLLPFKVSIFIWRVLRRRIPVRTE
                     LDKRGIDLDSVRCPLCDDDVETIDHTLFFCRHAMEIWDRVYKWWGLGTVSNLSINEAF
                     RGKCKRSLSPLWSSIWQSIEWTCAYLIWNNRNQKVFSNSSWNGL"
     misc_feature    <415..588
                     /gene="LOC139843049"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgggcatca actttgcaga ttcgtttttg aagtcgattg gggatggggc cgaaactgaa
       61 ttttggggtg aaccgtggct ttgtgaccga cctttgaagc aaaagttcac gcgtttattc
      121 catttggaag aggagccgaa tatacatgtt cgtgatagaa ttacttggat cgatcgtgat
      181 gctattttta ccgagaattg gaggagaaca ccatcgggtc gaacacttga cgaccttaat
      241 tctcttaagg cactattgaa tgcttatgtg aaacaagata agacaatgga ttcgtgggtt
      301 tggaacctag ccgggaacgg gttattcact acaaagaaat tggcggcaat tatcgacgac
      361 aaacttattg gtaccggatc aaattcgaat gaggaattta tgaagaatca cttgttacct
      421 tttaaagttt caatcttcat atggagggta ctaagaagac ggattccggt acgtaccgaa
      481 cttgataaaa gaggtataga ccttgattcc gttaggtgcc ctctatgtga tgatgatgtg
      541 gagactattg atcatacttt gttcttttgt cgacatgcga tggagatttg ggatcgggtg
      601 tataaatggt ggggtctagg aacggtttca aacttaagca ttaatgaggc ttttagaggc
      661 aagtgtaagc gttccttatc ccctttatgg tcgagtatat ggcaatctat cgagtggacg
      721 tgcgcttatc taatatggaa taatcggaac caaaaagtgt tttccaactc atcatggaat
      781 ggtctgtga
//
LOCUS       XM_071833134             573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SEED AND ROOT HAIR
            PROTECTIVE PROTEIN-like (LOC139843050), mRNA.
ACCESSION   XM_071833134
VERSION     XM_071833134.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..573
                     /gene="LOC139843050"
                     /note="protein SEED AND ROOT HAIR PROTECTIVE PROTEIN-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins"
                     /db_xref="GeneID:139843050"
     CDS             1..573
                     /gene="LOC139843050"
                     /codon_start=1
                     /product="protein SEED AND ROOT HAIR PROTECTIVE
                     PROTEIN-like"
                     /protein_id="XP_071689235.1"
                     /db_xref="GeneID:139843050"
                     /translation="MKTTTTTFSAILFLLSVTVSILSATADGASSVAPATKPAIPYKV
                     KDKETPKPIAVQGLIYCKSGSKLIPLKGATARVTCLAKNHNGLELAPFSVSSCPADDK
                     GYFLAKLSPPSTTYIKKAEWELKDCKVFLEKSPMELCKVPLDINGGIKGAHIISTSSY
                     RLLKNANLYSIEPFFYASDELKPVSDKKGY"
     misc_feature    163..438
                     /gene="LOC139843050"
                     /note="Pollen protein Ole e 1 like; Region:
                     Pollen_Ole_e_1; pfam01190"
                     /db_xref="CDD:460103"
ORIGIN      
        1 atgaaaacca ctaccaccac attctccgcc atcctcttcc tgttgtcagt gacagtatcg
       61 attctttccg ccacggctga tggtgcctcc agcgttgctc cggcaacaaa gcccgcaatc
      121 ccatataagg tgaaagacaa ggaaactccc aagcccattg cagttcaagg ccttatatat
      181 tgtaaatctg gctctaaact tatcccactt aaaggagcga cggccagagt aacttgtctg
      241 gcaaagaacc acaacgggct tgaattagca ccattttcgg tctcaagttg cccagctgat
      301 gacaagggct attttctagc caaactgtcc ccaccttcaa caacttacat aaagaaagcc
      361 gaatgggagc tcaaagactg caaggttttc cttgagaagt caccaatgga gctatgcaaa
      421 gttccactgg atattaacgg aggcataaag ggtgctcaca ttatttccac ttcgtcttat
      481 cgactactga aaaatgcaaa tctgtactct atcgaaccct ttttctacgc aagtgatgag
      541 cttaaaccag tctcggataa aaaagggtac taa
//
LOCUS       XM_071833135             573 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides protein SEED AND ROOT HAIR
            PROTECTIVE PROTEIN-like (LOC139843052), mRNA.
ACCESSION   XM_071833135
VERSION     XM_071833135.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..573
                     /gene="LOC139843052"
                     /note="protein SEED AND ROOT HAIR PROTECTIVE PROTEIN-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:139843052"
     CDS             1..573
                     /gene="LOC139843052"
                     /codon_start=1
                     /product="protein SEED AND ROOT HAIR PROTECTIVE
                     PROTEIN-like"
                     /protein_id="XP_071689236.1"
                     /db_xref="GeneID:139843052"
                     /translation="MKTIATALSTILFLLSVTLSIVSTTADGAYAVAPSTKHEIPYKV
                     SEKETPKPIAVQGLIYCKSGSKLIPLKGATARVTCLAKNHNGLELAPFSVSSCPADDK
                     GYFLAKLSPPSTNYVKKAKWELKDCKVFLEKSPMEQCKVPLDINGGIKGAHIISTSSY
                     RLLKNANMYSIEPFFYASDEPKLVSHKKGY"
     misc_feature    163..438
                     /gene="LOC139843052"
                     /note="Pollen protein Ole e 1 like; Region:
                     Pollen_Ole_e_1; pfam01190"
                     /db_xref="CDD:460103"
ORIGIN      
        1 atgaagacca ttgccaccgc attatccacc atcctcttcc tgttgtcggt aacactatcg
       61 attgtttcca ccactgctga tggtgcctac gccgttgctc cgtcaacaaa gcacgagatc
      121 ccatataagg tgagtgaaaa ggaaactccc aagcccattg cagttcaagg ccttatatat
      181 tgtaaatctg gctctaaact catcccactt aaaggagcga cggccagagt aacttgtctg
      241 gcaaagaacc acaacgggct cgaattagca ccattttctg tctcaagttg cccagctgat
      301 gacaagggct attttctagc caaactgtcc ccaccttcga caaattatgt aaagaaagcc
      361 aaatgggagc tcaaggactg caaggttttc cttgagaagt caccaatgga gcaatgcaaa
      421 gttccactag atattaacgg aggcataaag ggtgctcaca ttatttccac ttcgtcttat
      481 cgactcctga aaaacgcaaa tatgtactct atcgaaccct ttttctatgc aagtgatgaa
      541 cctaaactag tctctcataa aaagggttac taa
//
LOCUS       XM_071833136             558 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843053), mRNA.
ACCESSION   XM_071833136
VERSION     XM_071833136.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..558
                     /gene="LOC139843053"
                     /note="uncharacterized LOC139843053; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139843053"
     CDS             1..351
                     /gene="LOC139843053"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689237.1"
                     /db_xref="GeneID:139843053"
                     /translation="MANEQTGSESQQEKGNDNPQTNTSLLTAGGFGRKILEQYRKAKE
                     NAEAYPYVWGSYLIVYGGFGLWVAYRYKKLRNTEDRVRALQERLRILRQEREPKSSAA
                     ASESVKSSIDKTTK"
ORIGIN      
        1 atggcgaatg agcaaactgg cagtgaaagt cagcaggaaa agggcaatga taacccacaa
       61 acaaacacta gtctgttaac tgcaggtgga tttggcagga agatacttga gcagtatcgt
      121 aaagccaaag agaatgcaga agcttaccct tatgtttggg gttcgtatct tattgtatac
      181 ggtggatttg gtctgtgggt ggcatataga tacaaaaagc ttcgaaatac tgaagacaga
      241 gttagagctc ttcaagagag acttcgtatc cttcgtcaag aaagagagcc aaaaagctct
      301 gctgcagcga gtgaaagtgt taaatcatct attgacaaaa ctaccaaata gtatgcaggt
      361 aaactctatt taaattgaat tcgttttcac agtaggtgtg ttaacataca ttttgagttt
      421 tttgctactc aattagggtt ttgtactaag attttaactg gtcatactgc atagaagagg
      481 tttaaattca attttaagtt gagatcactt ttggttatag atgagtaaca tgatgttgaa
      541 cttgtttttg agggaagc
//
LOCUS       XM_071833137            1012 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides
            beta-1,3-galactosyltransferase pvg3-like (LOC139843054), mRNA.
ACCESSION   XM_071833137
VERSION     XM_071833137.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..1012
                     /gene="LOC139843054"
                     /note="beta-1,3-galactosyltransferase pvg3-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:139843054"
     CDS             56..1012
                     /gene="LOC139843054"
                     /codon_start=1
                     /product="beta-1,3-galactosyltransferase pvg3-like"
                     /protein_id="XP_071689238.1"
                     /db_xref="GeneID:139843054"
                     /translation="MPKSEKGRRFIISSFLFIVFLCTIASINEIRFDHLLRFSKCALS
                     YTSYTNNSTSLEDSSIRIESSTDEIRVLLGILTLPDHYQRRHFLRLVYGTQSVHRGKV
                     DVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCTENMNKGKTYTYFSSLPDMFNNESS
                     GSYPPYHYVMKGDDDVYFRLDNLVESLRPLPRDDLYYGYTIPCNQMNPYGHYMAGMGY
                     LISWDTVEWLQNSDIPKNHLEGPEDKVFGDWLHWGKRGKNRHNAKWSMYNYPDPPNGC
                     THELWPDTVAVHLLKTQEKWIRTLQYFNVTQDLKPSKLYHML"
     misc_feature    305..739
                     /gene="LOC139843054"
                     /note="Galactosyltransferase; Region: Galactosyl_T;
                     cl21608"
                     /db_xref="CDD:473923"
ORIGIN      
        1 atataatcat atcataacct ttcctactac ccttaccgga attacgttcg tcgatatgcc
       61 gaagtcggag aagggccgga ggttcatcat ttcttctttc cttttcattg tgtttctatg
      121 cactatagct tccattaatg aaatccgatt tgatcattta ttaagattca gcaaatgtgc
      181 actctcttat acatcttata ctaataatag tacatcttta gaagactcgt ctatacgaat
      241 agagtcttca acagatgaga ttcgggttct tctagggatt ctaacactcc cggaccacta
      301 ccaacgccgc cacttcctcc gactagttta cgggacccaa tccgtacaca gaggaaaagt
      361 tgatgtaaaa tttgttttct gcaaccttac aaaagaagac cagaaggttt tagtggcgct
      421 cgagattatg cgatatgatg acatcatcat cttgaattgc acagaaaata tgaacaaagg
      481 taagacctac acttatttct cgagcttgcc agatatgttt aataacgagt cgagtgggtc
      541 ctacccgcca taccattatg tcatgaaagg tgatgacgat gtgtatttcc gtctcgataa
      601 cttagtagag tccttgaggc cgttaccaag agacgattta tattatgggt atacgatacc
      661 atgtaatcaa atgaatcctt atgggcatta catggcgggt atgggatact tgatatcgtg
      721 ggatacggta gagtggttac agaattcaga tatcccgaag aatcatctag aaggtccgga
      781 agataaagtt tttggagatt ggttacactg gggtaaacgc ggaaagaatc gacataatgc
      841 taagtggtcg atgtataatt atccggaccc acccaatgga tgtacacatg aactttggcc
      901 agatacggtg gcagttcacc ttttaaagac gcaagagaag tggattcgga cactacagta
      961 tttcaatgtt acccaagatc ttaaaccttc gaaactgtac catatgttgt ag
//
LOCUS       XM_071833139             756 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized
            mitochondrial protein AtMg00310-like (LOC139843055), mRNA.
ACCESSION   XM_071833139
VERSION     XM_071833139.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..756
                     /gene="LOC139843055"
                     /note="uncharacterized mitochondrial protein
                     AtMg00310-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:139843055"
     CDS             1..756
                     /gene="LOC139843055"
                     /codon_start=1
                     /product="uncharacterized mitochondrial protein
                     AtMg00310-like"
                     /protein_id="XP_071689240.1"
                     /db_xref="GeneID:139843055"
                     /translation="MGSLGIYLLSLFKCPESNLKRLESIRARFFWGGSNKVKKMSWVK
                     WDKILAPLDRGGLNVGSLKGFNLALIHKWRWRYLSNPNDYWVAIIKSIHGNKFEQVSR
                     SCTSMWSAIVSSCNKTISDGILPADVIHIIHMHVENGTNVRFWHDLWCGSSILSSRFN
                     RLFHLDVNQNDSIADKCVNGEWQWVWSRGNIGSRNFQLLDVLRDEISFCQLSDCDDRW
                     MFSLCSDGIYSVKSTKLCIDRHILPASNTLTSW"
ORIGIN      
        1 atgggtagtc tcggaatata tctcttgtct ttgtttaaat gcccggaatc aaatttgaag
       61 cgtcttgaat ctattcgggc tagatttttt tggggcggat ctaataaggt gaaaaagatg
      121 tcatgggtta agtgggataa aatattagcg cctttggatc gaggcggtct aaatgtggga
      181 agtcttaaag gattcaatct agctttaatt cataaatgga ggtggcgata tctatctaat
      241 ccgaatgatt attgggttgc tattataaaa tcaatacatg gtaataaatt tgagcaagta
      301 tcgaggagct gtactagtat gtggtcggct attgtttcaa gttgtaacaa aactatcagt
      361 gatggtattc ttccagcaga cgtcattcac atcattcaca tgcatgttga aaatggaaca
      421 aatgttcgtt tttggcacga tctttggtgt gggagttcta ttttatcatc ccgttttaac
      481 cgtttattcc atctagatgt taaccaaaat gattcgattg cggacaaatg cgtaaatgga
      541 gagtggcaat gggtttggtc tagaggaaac ataggaagtc gtaattttca actacttgat
      601 gtgcttcggg acgagatcag tttttgtcag ctttctgatt gtgatgatag gtggatgttt
      661 tctttatgtt ccgatggtat ctactcggtt aaatctacaa agttgtgcat tgatcgtcat
      721 attcttccgg cttcgaatac tttgacgagt tggtaa
//
LOCUS       XM_071833140             816 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843056), mRNA.
ACCESSION   XM_071833140
VERSION     XM_071833140.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..816
                     /gene="LOC139843056"
                     /note="uncharacterized LOC139843056; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:139843056"
     CDS             1..816
                     /gene="LOC139843056"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689241.1"
                     /db_xref="GeneID:139843056"
                     /translation="MRAWYDIWSDIGPLAYIISSRIIHDGGFNVDSKVRDIVVNGQWV
                     WPIEWVNRFPLLANIKVPIFQDYDDMIKWKDFNGVLKDFSVSSAWNVIRTRASTIGWY
                     DIVWFAQCVPRHAFLVWLLMGEKLKTQDKLQGWETRNLQDNSSVCSLCSLEMDSHGHL
                     FFRCPFANRVWRCAWQYADILQSCDSWKDVVHTMQSIANKKSAEVIVAKLLFGASVYV
                     IWQEQNDRLFQKKVRSYDKVFEAIYTTVRWKIMSIKWKNSLHVRSMKSNWKVP"
     misc_feature    247..510
                     /gene="LOC139843056"
                     /note="zinc-binding in reverse transcriptase; Region:
                     zf-RVT; pfam13966"
                     /db_xref="CDD:433612"
ORIGIN      
        1 atgcgtgcat ggtatgatat ttggagtgat ataggtcctt tagcttatat tatttcaagt
       61 agaattattc atgatggagg ttttaatgtg gattcaaaag tgagagatat tgttgttaat
      121 gggcagtggg tgtggccaat tgaatgggtc aacagattcc ctttgctagc taatatcaaa
      181 gttcctatat ttcaagatta tgatgatatg attaaatgga aggactttaa tggcgttttg
      241 aaagatttct ctgttagttc tgcttggaat gttatccgta ctagagcatc gactattggt
      301 tggtatgata ttgtttggtt tgctcaatgt gtgcctcgtc acgcgtttct agtttggttg
      361 cttatgggtg aaaaactaaa gacacaggat aagcttcaag gttgggagac gaggaatctg
      421 caagacaact cgagtgtgtg ctctttatgt tcgctggaaa tggactctca tggtcactta
      481 ttttttcgtt gtccttttgc aaatcgtgtg tggagatgcg cttggcaata cgctgacatt
      541 cttcagtcat gtgattcttg gaaagatgtt gtccacacta tgcagtctat tgcgaataag
      601 aaatctgctg aggtaattgt cgcaaagctt ctatttggtg cttcggttta tgttatttgg
      661 caagagcaga atgataggtt atttcaaaag aaggtgagat catatgataa ggtctttgaa
      721 gccatatata ctactgttcg gtggaagatc atgtcgatta agtggaaaaa ttccttgcac
      781 gttaggagta tgaaatcaaa ttggaaagtc ccctaa
//
LOCUS       XM_071833141            2751 bp    mRNA    linear   PLN 04-MAR-2025
DEFINITION  PREDICTED: Rutidosis leptorrhynchoides uncharacterized protein
            (LOC139843058), mRNA.
ACCESSION   XM_071833141
VERSION     XM_071833141.1
DBLINK      BioProject: PRJNA1220673
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rutidosis leptorrhynchoides
  ORGANISM  Rutidosis leptorrhynchoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Asterales; Asteraceae;
            Asteroideae; Inuleae; Plucheinae; Rutidosis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092336) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_046630445.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/28/2025
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Rutidosis leptorrhynchoides"
                     /mol_type="mRNA"
                     /isolate="AG116_Rl617_1_P2"
                     /db_xref="taxon:125765"
                     /chromosome="4"
                     /tissue_type="leaf"
                     /dev_stage="flowering"
                     /geo_loc_name="Australia: Truganina Cemetery, Victoria"
                     /collection_date="2024"
                     /collected_by="John Morgan"
     gene            1..2751
                     /gene="LOC139843058"
                     /note="uncharacterized LOC139843058; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:139843058"
     CDS             1..2751
                     /gene="LOC139843058"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_071689242.1"
                     /db_xref="GeneID:139843058"
                     /translation="MAGKGVPIFDGTDFTTWKPKLLWYLGSIHDEMERVLTEGSIIPG
                     KWIEEVSNVDGTVVKPAEFIQTPRTQWTEQDAILYRLDSKIRSIIGNAISVPILRKVG
                     HAKTVKAMWDILLNDFKGVTVVKTQKKKNFVRSYENFNAEPKESLFDLHSRFQVLIND
                     LEGAGVTKTQAELCQKFVDALPETFESIITSMVVSEKLDNYDLSGLFGILTNFEEIKL
                     KKKINAKKIAKDPDAALVATTKRNKELFSSYSTKAESDEESDDSSEDEEVQILEEQMA
                     LLTQRIEKKKFGPRKGKSPFDPKKATCFKCGKVGHNAAECWSKVDSSSNSVKHLEKAK
                     KYKKKYKNLKKEGVKPVVQNFVHYVDNEKISMFKYLLNDFKSCLDENKRLKSELNDLK
                     VIVREKDLHISETEQCRIELAAYKSSFNKEIIRFDDEKTRQIPADIKDVLGVGFDLKN
                     DIGIEKDPNRFKHVILHNTFLKVDGDKQYLTDAFVRPESGFIYSTETILGSKITHDSK
                     SEKQKCFEVKAITKLKKRISKLCKKLKDKPKVKTESDKPKSPEKVRKWIKLDKQCSNI
                     QDQCKEKIVWIKNKPFVWRVKSSSCEPTVKWVLKGCKEHLEGFIEEKGPSVRYGDNSV
                     GKTIGYGSVKVGGVTLKRVALVEGLMHNLLSVSQVADEEFDLNATNSVIDTCLYSQTI
                     PELNWLWHRRLSHLNFKNINELSKKGLVRVLPQLSYKKDKVCSACVKGKQTKAHFHSK
                     TLTTIDEPLHMLHMDLFRPMNIGSLSGKKYPLEIVDEYSRLTWVIFLYAKSDAPEEII
                     NLIKKEQVQKGKLVKQLRSDHGTEFKNATVVDFCESVGIGQNFSSVRTPQQNGVAERR
                     NRTLIEDARTMLCHTNVAIRFWAEAVNTACYTQNKSIIVKKHGKTPYELYHKKVPTVH
                     YF"
     misc_feature    256..>576
                     /gene="LOC139843058"
                     /note="gag-polypeptide of LTR copia-type; Region:
                     Retrotran_gag_2; pfam14223"
                     /db_xref="CDD:464108"
     misc_feature    904..954
                     /gene="LOC139843058"
                     /note="zinc finger; Region: ZnF_C2HC; smart00343"
                     /db_xref="CDD:197667"
     misc_feature    1996..2196
                     /gene="LOC139843058"
                     /note="GAG-pre-integrase domain; Region: gag_pre-integrs;
                     pfam13976"
                     /db_xref="CDD:372857"
     misc_feature    <2224..2604
                     /gene="LOC139843058"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; Region: Tra5; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 atggcaggaa aaggtgttcc aatttttgat ggtactgatt tcacaacctg gaaaccaaag
       61 ttactttggt atctgggttc tattcatgat gaaatggaaa gagttctaac tgaaggatca
      121 attattccag gtaaatggat cgaagaagta agtaatgttg atggtactgt ggtcaaacct
      181 gccgagttca ttcaaactcc aagaactcag tggacagaac aagatgctat tctttataga
      241 ttagatagca aaatcagaag tatcattggc aatgcaattt ctgttcctat cttgagaaag
      301 gtaggacatg ctaaaactgt aaaagccatg tgggatattc tgctaaatga ttttaaaggg
      361 gtcactgtgg ttaaaactca aaagaagaag aattttgtaa ggtcgtatga aaattttaat
      421 gctgaaccaa aggaatcatt gtttgatctt cattcaagat ttcaggtgtt gattaatgat
      481 ctggaaggag ctggagttac aaagactcaa gcagaattgt gccaaaagtt tgttgatgca
      541 cttccagaaa cttttgaatc tatcatcacc tcaatggtag taagtgagaa gttggataat
      601 tatgatctta gtgggttatt tgggatcctc acaaattttg aggaaatcaa attgaagaag
      661 aagatcaatg ctaagaagat agccaaagat ccagatgctg ctttagttgc aacaaccaaa
      721 agaaacaaag aattattttc aagctattct accaaggctg aatcagatga agaaagtgat
      781 gactcttcag aggatgaaga ggttcaaata cttgaagaac agatggctct tcttactcaa
      841 aggattgaaa agaaaaagtt tggacctagg aaaggaaaaa gtccttttga tcctaagaag
      901 gctacttgtt ttaagtgtgg aaaggttggt cacaatgctg ctgaatgttg gtctaaggtt
      961 gattctagtt caaactctgt taagcatttg gaaaaagcaa agaagtacaa gaagaagtac
     1021 aagaacttga agaaggaagg agtaaagcct gtggtacaaa attttgttca ctatgttgat
     1081 aatgaaaaaa taagcatgtt taagtatttg ttgaatgact ttaaatcatg cctagatgaa
     1141 aataaaaggt taaaatctga actaaatgat cttaaagtca tagttagaga gaaagattta
     1201 cacataagtg aaacagagca atgtagaat
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